all-aligned 30654560 all-mapq-filter 2560111 autosomal-align 25489284 duplicate 2962682 duplicate-nuclear 2700940 mm 2578524 nm 1028412 nuclear-align 26274438 paired-aligned 26692020 paired-autosomal-align 25489284 paired-nuclear-align 26274438 qc-flagged 4990952 u 26692020 u-pf 26692020 u-pf-n 26449739 u-pf-n-mm2 26449739 u-pf-n-mm2-mito 26036448 chr1 2081298 chr10 1189216 chr11 1903721 chr12 923911 chr13 1340021 chr14 827736 chr15 1296613 chr16 888912 chr17 1271626 chr18 660250 chr19 823670 chr2 2002629 chr3 1342950 chr4 1571177 chr5 1562548 chr6 1197085 chr7 1625971 chr8 1385331 chr9 1363668 chrM 413291 chrX 771771 chrY 6344 mapq-0 3342987 mapq-1 11539 mapq-10 22923 mapq-11 56762 mapq-12 29797 mapq-13 29434 mapq-14 13160 mapq-15 58533 mapq-16 28089 mapq-17 51434 mapq-18 39698 mapq-19 2356 mapq-2 8352 mapq-20 70752 mapq-21 1673 mapq-22 7481 mapq-23 223763 mapq-24 1635 mapq-25 93639 mapq-26 1834 mapq-27 1475 mapq-28 1451 mapq-29 728267 mapq-3 44198 mapq-30 2985 mapq-31 1654 mapq-32 1908 mapq-33 2060 mapq-34 1680 mapq-35 2090 mapq-36 30365 mapq-37 15933685 mapq-38 3768 mapq-39 2190 mapq-4 12040 mapq-40 6156 mapq-41 3880 mapq-42 2368 mapq-43 7582 mapq-44 3294 mapq-45 4090 mapq-46 23710 mapq-47 5448 mapq-48 5594 mapq-49 6212 mapq-5 12710 mapq-50 11342 mapq-51 3610 mapq-52 10532 mapq-53 7458 mapq-54 10042 mapq-55 14008 mapq-57 25898 mapq-6 12858 mapq-60 10496700 mapq-7 14330 mapq-8 14171 mapq-9 115322 samflag-1107 675675 samflag-1123 674795 samflag-1171 674795 samflag-1187 675675 samflag-147 5890346 samflag-1601 5888 samflag-1609 57962 samflag-1617 146348 samflag-163 5896403 samflag-1633 146875 samflag-1649 5840 samflag-1657 57580 samflag-1665 6014 samflag-1673 28641 samflag-1681 146783 samflag-1697 146283 samflag-1713 5727 samflag-1721 28643 samflag-4179 38502 samflag-4195 39418 samflag-4243 39418 samflag-4259 38502 samflag-4673 4422 samflag-4677 124 samflag-4681 22 samflag-4689 9594 samflag-4705 10166 samflag-4717 1 samflag-4721 4289 samflag-4725 100 samflag-4729 13 samflag-4737 4309 samflag-4741 744 samflag-4745 5 samflag-4753 10204 samflag-4765 1 samflag-4769 9538 samflag-4785 4474 samflag-4789 458 samflag-4793 5 samflag-5203 64697 samflag-5219 66174 samflag-5267 66174 samflag-5283 64697 samflag-5697 3777 samflag-5705 722 samflag-5713 7688 samflag-5721 1 samflag-5729 7968 samflag-5745 3733 samflag-5753 445 samflag-5761 3651 samflag-5769 119 samflag-577 92382 samflag-5777 8060 samflag-5785 2 samflag-5793 7753 samflag-5809 3846 samflag-581 52788 samflag-5817 95 samflag-585 86139 samflag-589 316780 samflag-593 621914 samflag-605 3 samflag-609 621122 samflag-613 2 samflag-621 1 samflag-625 91846 samflag-629 52731 samflag-633 86207 samflag-637 3 samflag-641 92495 samflag-645 144101 samflag-649 24147 samflag-653 316780 samflag-657 621084 samflag-669 1 samflag-673 621970 samflag-677 1 samflag-685 3 samflag-689 91661 samflag-693 143787 samflag-697 24088 samflag-701 3 samflag-83 5896403 samflag-99 5890346 aligned-readlength-10 1 aligned-readlength-15 2 aligned-readlength-16 100 aligned-readlength-17 408 aligned-readlength-18 1134 aligned-readlength-19 2670 aligned-readlength-20 5412 aligned-readlength-21 9281 aligned-readlength-22 15225 aligned-readlength-23 23312 aligned-readlength-24 33709 aligned-readlength-25 46589 aligned-readlength-26 61878 aligned-readlength-27 81478 aligned-readlength-28 100918 aligned-readlength-29 123649 aligned-readlength-30 144580 aligned-readlength-31 177055 aligned-readlength-32 205570 aligned-readlength-33 230021 aligned-readlength-34 254454 aligned-readlength-35 280000 aligned-readlength-36 307715 aligned-readlength-37 333663 aligned-readlength-38 361945 aligned-readlength-39 382132 aligned-readlength-40 390214 aligned-readlength-41 399576 aligned-readlength-42 410370 aligned-readlength-43 416528 aligned-readlength-44 425846 aligned-readlength-45 430668 aligned-readlength-46 435312 aligned-readlength-47 445663 aligned-readlength-48 454230 aligned-readlength-49 460062 aligned-readlength-50 462705 aligned-readlength-51 451621 aligned-readlength-52 440783 aligned-readlength-53 430375 aligned-readlength-54 420441 aligned-readlength-55 409996 aligned-readlength-56 403375 aligned-readlength-57 394831 aligned-readlength-58 387265 aligned-readlength-59 379808 aligned-readlength-60 369191 aligned-readlength-61 355075 aligned-readlength-62 332867 aligned-readlength-63 313248 aligned-readlength-64 294925 aligned-readlength-65 281073 aligned-readlength-66 265276 aligned-readlength-67 251972 aligned-readlength-68 242760 aligned-readlength-69 232913 aligned-readlength-70 229603 aligned-readlength-71 218175 aligned-readlength-72 188412 aligned-readlength-73 172912 aligned-readlength-74 158378 aligned-readlength-75 146212 aligned-readlength-76 11006458 readlength-10 9 readlength-11 6 readlength-12 8 readlength-13 16 readlength-14 28 readlength-15 99 readlength-16 335 readlength-17 796 readlength-18 1656 readlength-19 3393 readlength-2 34 readlength-20 6464 readlength-21 10877 readlength-22 17618 readlength-23 26890 readlength-24 39096 readlength-25 53767 readlength-26 71282 readlength-27 93768 readlength-28 116503 readlength-29 141924 readlength-30 166919 readlength-31 204666 readlength-32 236519 readlength-33 264159 readlength-34 292907 readlength-35 319526 readlength-36 351799 readlength-37 381899 readlength-38 414031 readlength-39 436688 readlength-40 449435 readlength-41 456906 readlength-42 472997 readlength-43 477135 readlength-44 489515 readlength-45 497038 readlength-46 497095 readlength-47 509027 readlength-48 519577 readlength-49 525925 readlength-50 529439 readlength-51 515793 readlength-52 503801 readlength-53 488745 readlength-54 479398 readlength-55 467216 readlength-56 461155 readlength-57 451312 readlength-58 442341 readlength-59 433298 readlength-6 3 readlength-60 422652 readlength-61 405705 readlength-62 380123 readlength-63 359912 readlength-64 338462 readlength-65 323189 readlength-66 304616 readlength-67 290591 readlength-68 279448 readlength-69 268997 readlength-7 3 readlength-70 266610 readlength-71 252807 readlength-72 216444 readlength-73 198482 readlength-74 181668 readlength-75 168566 readlength-76 13703856 readlength-8 2 readlength-9 6