all-aligned	28125540
all-mapq-filter	2374666
autosomal-align	23557614
duplicate	3921054
duplicate-nuclear	3474598
mm	2351493
nm	1116656
nuclear-align	24277920
paired-aligned	24934078
paired-autosomal-align	23557614
paired-nuclear-align	24277920
qc-flagged	4308118
u	24934078
u-pf	24934078
u-pf-n	24677682
u-pf-n-mm2	24677682
u-pf-n-mm2-mito	24028608
chr1	1937961
chr10	1100141
chr11	1777922
chr12	849153
chr13	1240994
chr14	755736
chr15	1173339
chr16	814578
chr17	1171241
chr18	602986
chr19	761582
chr2	1803709
chr3	1243354
chr4	1430236
chr5	1449668
chr6	1103305
chr7	1562645
chr8	1281587
chr9	1255335
chrM	649074
chrX	708104
chrY	5032
mapq-0	3302258
mapq-1	8110
mapq-10	19116
mapq-11	47318
mapq-12	23231
mapq-13	24701
mapq-14	11162
mapq-15	44667
mapq-16	21907
mapq-17	36428
mapq-18	37891
mapq-19	1503
mapq-2	6803
mapq-20	68658
mapq-21	983
mapq-22	6103
mapq-23	224419
mapq-24	1291
mapq-25	91980
mapq-26	1387
mapq-27	1019
mapq-28	1142
mapq-29	293247
mapq-3	25190
mapq-30	1684
mapq-31	1172
mapq-32	1340
mapq-33	1438
mapq-34	1422
mapq-35	1562
mapq-36	19290
mapq-37	17584449
mapq-38	2328
mapq-39	1172
mapq-4	9627
mapq-40	4820
mapq-41	2660
mapq-42	1276
mapq-43	5264
mapq-44	1836
mapq-45	2218
mapq-46	22882
mapq-47	3016
mapq-48	3164
mapq-49	3610
mapq-5	9267
mapq-50	7192
mapq-51	2056
mapq-52	6118
mapq-53	4426
mapq-54	5906
mapq-55	8586
mapq-57	15868
mapq-6	10545
mapq-60	7075986
mapq-7	11520
mapq-8	12470
mapq-9	95512
samflag-1107	869367
samflag-1123	867932
samflag-1171	867932
samflag-1187	869367
samflag-147	5200082
samflag-1601	9649
samflag-1609	41775
samflag-1617	102921
samflag-163	5201579
samflag-1633	101293
samflag-1641	1
samflag-1649	9904
samflag-1657	41279
samflag-1665	10035
samflag-1673	24182
samflag-1681	101249
samflag-1697	102960
samflag-1713	9479
samflag-1721	23843
samflag-4179	51595
samflag-4195	53256
samflag-4243	53256
samflag-4259	51595
samflag-4673	5499
samflag-4677	135
samflag-4681	12
samflag-4685	3
samflag-4689	12862
samflag-4693	2
samflag-4705	13732
samflag-4721	5253
samflag-4725	132
samflag-4729	6
samflag-4737	5156
samflag-4741	825
samflag-4745	4
samflag-4749	3
samflag-4753	13797
samflag-4757	2
samflag-4769	12981
samflag-4785	5469
samflag-4789	523
samflag-4793	3
samflag-5203	110286
samflag-5219	112942
samflag-5267	112942
samflag-5283	110286
samflag-5697	7284
samflag-5705	813
samflag-5713	15239
samflag-5729	16444
samflag-5737	1
samflag-5745	6824
samflag-5753	517
samflag-5761	6898
samflag-5769	131
samflag-577	109379
samflag-5777	16488
samflag-5785	4
samflag-5793	15200
samflag-5801	2
samflag-5809	7249
samflag-581	47987
samflag-5817	129
samflag-585	55495
samflag-589	412464
samflag-593	463721
samflag-605	2
samflag-609	461518
samflag-613	4
samflag-621	2
samflag-625	108353
samflag-629	48126
samflag-633	55427
samflag-637	1
samflag-641	109722
samflag-645	97270
samflag-649	23805
samflag-653	412464
samflag-657	461453
samflag-669	2
samflag-673	463602
samflag-685	2
samflag-689	108137
samflag-693	96706
samflag-697	24283
samflag-701	1
samflag-83	5201579
samflag-99	5200082
aligned-readlength-16	40
aligned-readlength-17	192
aligned-readlength-18	530
aligned-readlength-19	1373
aligned-readlength-20	2794
aligned-readlength-21	5215
aligned-readlength-22	9019
aligned-readlength-23	13655
aligned-readlength-24	20811
aligned-readlength-25	29608
aligned-readlength-26	41236
aligned-readlength-27	54443
aligned-readlength-28	69166
aligned-readlength-29	86926
aligned-readlength-30	106112
aligned-readlength-31	131355
aligned-readlength-32	157393
aligned-readlength-33	179234
aligned-readlength-34	203542
aligned-readlength-35	229500
aligned-readlength-36	256986
aligned-readlength-37	285510
aligned-readlength-38	314422
aligned-readlength-39	341267
aligned-readlength-40	359628
aligned-readlength-41	379749
aligned-readlength-42	401359
aligned-readlength-43	414272
aligned-readlength-44	432246
aligned-readlength-45	444524
aligned-readlength-46	456179
aligned-readlength-47	468278
aligned-readlength-48	481750
aligned-readlength-49	489308
aligned-readlength-50	500339
aligned-readlength-51	500240
aligned-readlength-52	497237
aligned-readlength-53	491019
aligned-readlength-54	486269
aligned-readlength-55	481735
aligned-readlength-56	476381
aligned-readlength-57	472240
aligned-readlength-58	465240
aligned-readlength-59	454855
aligned-readlength-60	444226
aligned-readlength-61	430215
aligned-readlength-62	414115
aligned-readlength-63	399468
aligned-readlength-64	380570
aligned-readlength-65	365722
aligned-readlength-66	348306
aligned-readlength-67	334481
aligned-readlength-68	321020
aligned-readlength-69	305480
aligned-readlength-70	290683
aligned-readlength-71	280628
aligned-readlength-72	253414
aligned-readlength-73	236970
aligned-readlength-74	219892
aligned-readlength-75	205260
aligned-readlength-76	8010450
aligned-readlength-8	1
readlength-1	1
readlength-10	18
readlength-11	4
readlength-12	17
readlength-13	8
readlength-14	13
readlength-15	45
readlength-16	171
readlength-17	409
readlength-18	796
readlength-19	1793
readlength-2	237
readlength-20	3419
readlength-21	6274
readlength-22	10709
readlength-23	15963
readlength-24	24480
readlength-25	34688
readlength-26	48084
readlength-27	63403
readlength-28	80623
readlength-29	100187
readlength-30	122960
readlength-31	151416
readlength-32	181565
readlength-33	205952
readlength-34	234453
readlength-35	263043
readlength-36	295659
readlength-37	328319
readlength-38	362033
readlength-39	392397
readlength-4	1
readlength-40	416036
readlength-41	435992
readlength-42	463855
readlength-43	475293
readlength-44	498473
readlength-45	514316
readlength-46	523179
readlength-47	537642
readlength-48	553490
readlength-49	562961
readlength-50	574327
readlength-51	573311
readlength-52	570970
readlength-53	560230
readlength-54	558108
readlength-55	551596
readlength-56	548078
readlength-57	541865
readlength-58	534233
readlength-59	522319
readlength-6	4
readlength-60	510366
readlength-61	493539
readlength-62	476099
readlength-63	458248
readlength-64	437550
readlength-65	422618
readlength-66	401688
readlength-67	386753
readlength-68	370843
readlength-69	353382
readlength-7	14
readlength-70	336355
readlength-71	324812
readlength-72	291526
readlength-73	272146
readlength-74	252174
readlength-75	236244
readlength-76	9772403
readlength-8	3
readlength-9	15