chr1	190910	190911	chr1:190911:G:A	rs1268825173	G	A	.	Sox2_MA0143.3	-20	0	-	0	0	.
chr1	779240	779241	chr1:779241:C:A	rs547653711	C	A	.	Sox2_MA0143.3	-4	0	+	0	0	.
chr1	911427	911428	chr1:911428:C:T	rs4475691	C	T	c	Sox2_MA0143.3	-2	0	+	0	0	.
chr1	917749	917750	chr1:917750:G:A	rs112599122	G	A	g	Sox2_MA0143.3	-16	0	-	0	0	.
chr1	940686	940687	chr1:940687:C:T	rs145881258	C	T	c	Sox2_MA0143.3	-14	0	+	0	0	.
chr1	944233	944234	chr1:944234:A:G	chr1:944234:A:G	A	G	a	Sox2_MA0143.3	-20	0	-	0	0	.
chr1	954914	954915	chr1:954915:G:C	rs6661531	G	C	G	Sox2_MA0143.3	23	0	-	0	0	.
chr1	956564	956565	chr1:956565:A:G	rs13303106	A	G	A	Sox2_MA0143.3	-4	0	-	0	0	.
chr1	1000257	1000258	chr1:1000258:G:A	rs562493188	G	A	t	Sox2_MA0143.3	7	1	-	9.019595766176417	9.613475778572903	CCATTGTC
chr1	1000278	1000279	chr1:1000279:C:T	rs139298395	C	T	c	Sox2_MA0143.3	-14	0	-	0	0	.
chr1	1000282	1000283	chr1:1000283:C:G	rs183383044	C	G	c	Sox2_MA0143.3	-18	0	-	0	0	.
chr1	1015595	1015596	chr1:1015596:C:T	rs146153810	C	T	c	Sox2_MA0143.3	26	0	-	0	0	.
chr1	1017696	1017697	chr1:1017697:A:G	rs137877036	A	G	N	Sox2_MA0143.3	21	0	-	0	0	.
chr1	1060100	1060101	chr1:1060101:T:G	rs9442393	T	G	-	Sox2_MA0143.3	16	0	+	0	0	.
chr1	1070688	1070689	chr1:1070689:G:A	rs55918415	G	A	g	Sox2_MA0143.3	15	0	+	0	0	.
chr1	1085868	1085869	chr1:1085869:G:A	rs61520960	G	A	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr1	1111993	1111994	chr1:1111994:T:A	rs12743678	T	A	A	Sox2_MA0143.3	22	0	+	0	0	.
chr1	1115954	1115955	chr1:1115955:C:T	rs530660648	C	T	c	Sox2_MA0143.3	-3	0	+	0	0	.
chr1	1115979	1115980	chr1:1115980:C:T	rs530027351	C	T	c	Sox2_MA0143.3	22	0	+	0	0	.
chr1	1135060	1135061	chr1:1135061:C:T	rs9442379	C	T	C	Sox2_MA0143.3	15	0	+	0	0	.
chr1	1136782	1136783	chr1:1136783:C:T	rs569587267	C	T	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr1	1137117	1137118	chr1:1137118:G:C	rs9442360	G	C	N	Sox2_MA0143.3	9	0	-	0	0	.
chr1	1137118	1137119	chr1:1137119:G:A	rs943408655	G	A	g	Sox2_MA0143.3	8	0	-	0	0	.
chr1	1191999	1192000	chr1:1192000:G:A	rs11260553	G	A	g	Sox2_MA0143.3	-13	0	+	0	0	.
chr1	1194539	1194540	chr1:1194540:G:A	rs12060422	G	A	G	Sox2_MA0143.3	14	0	+	0	0	.
chr1	1199726	1199727	chr1:1199727:C:T	rs58980341	C	T	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr1	1199727	1199728	chr1:1199728:C:G	rs58737594	C	G	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr1	1249879	1249880	chr1:1249880:A:G	rs4567233	A	G	-	Sox2_MA0143.3	2	1	-	9.206767037375712	2.900948058900136	CCTTTGTC
chr1	1307087	1307088	chr1:1307088:G:A	rs2274264	G	A	G	Sox2_MA0143.3	-12	0	+	0	0	.
chr1	1505141	1505142	chr1:1505142:A:G	rs189057265	A	G	-	Sox2_MA0143.3	13	0	-	0	0	.
chr1	1505152	1505153	chr1:1505153:A:G	rs2313190	A	G	-	Sox2_MA0143.3	2	1	-	9.206767037375712	2.900948058900136	CCTTTGTC
chr1	1505169	1505170	chr1:1505170:T:C	rs2313191	T	C	-	Sox2_MA0143.3	-15	0	-	0	0	.
chr1	1565560	1565561	chr1:1565561:A:G	rs6603791	A	G	G	Sox2_MA0143.3	6	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr1	1568253	1568254	chr1:1568254:T:C	rs116424941	T	C	T	Sox2_MA0143.3	6	1	+	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr1	1594598	1594599	chr1:1594599:T:C	rs4648788	T	C	C	Sox2_MA0143.3	2	1	-	8.676919043985553	2.5582713367092715	CCATTGTG
chr1	1594613	1594614	chr1:1594614:G:C	rs72634811	G	C	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr1	1594617	1594618	chr1:1594618:C:G	rs28689700	C	G	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr1	1622509	1622510	chr1:1622510:C:T	rs72634816	C	T	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr1	1678654	1678655	chr1:1678655:T:A	rs78896679	T	A	T	Sox2_MA0143.3	8	0	-	0	0	.
chr1	1728706	1728707	chr1:1728707:T:C	rs74046212	T	C	-	Sox2_MA0143.3	13	0	-	0	0	.
chr1	1728730	1728731	chr1:1728731:G:A	rs193087254	G	A	-	Sox2_MA0143.3	-11	0	-	0	0	.
chr1	1754600	1754601	chr1:1754601:G:T	rs4751	G	T	g	Sox2_MA0143.3	-13	0	+	0	0	.
chr1	1755712	1755713	chr1:1755713:G:A	rs4648815	G	A	A	Sox2_MA0143.3	-15	0	-	0	0	.
chr1	1890434	1890435	chr1:1890435:T:A	rs1042254422	T	A	T	Sox2_MA0143.3	7	1	+	9.800647049772198	3.5547341015215945	CCTTTGTT
chr1	1899359	1899360	chr1:1899360:C:T	rs147688640	C	T	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr1	1987048	1987049	chr1:1987049:A:G	rs4350140	A	G	G	Sox2_MA0143.3	6	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr1	2028538	2028539	chr1:2028539:C:T	rs28409373	C	T	C	Sox2_MA0143.3	12	0	+	0	0	.
chr1	2116139	2116140	chr1:2116140:C:T	rs548325052	C	T	C	Sox2_MA0143.3	23	0	-	0	0	.
chr1	2116144	2116145	chr1:2116145:T:C	rs3107146	T	C	C	Sox2_MA0143.3	18	0	-	0	0	.
chr1	2246616	2246617	chr1:2246617:C:T	rs547710630	C	T	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr1	2249219	2249220	chr1:2249220:C:T	rs531528934	C	T	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr1	2271132	2271133	chr1:2271133:C:T	rs60635488	C	T	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr1	2283147	2283148	chr1:2283148:G:C	rs6668309	G	C	G	Sox2_MA0143.3	19	0	+	0	0	.
chr1	2471059	2471060	chr1:2471060:G:A	rs2494627	G	A	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr1	2530399	2530400	chr1:2530400:G:A	rs894939750	G	A	.	Sox2_MA0143.3	-20	0	-	0	0	.
chr1	2535687	2535688	chr1:2535688:G:A	rs76250408	G	A	.	Sox2_MA0143.3	-14	0	-	0	0	.
chr1	2583873	2583874	chr1:2583874:G:A	rs75018214	G	A	.	Sox2_MA0143.3	17	0	+	0	0	.
chr1	2596693	2596694	chr1:2596694:T:C	rs2843401	T	C	C	Sox2_MA0143.3	23	0	+	0	0	.
chr1	2633025	2633026	chr1:2633026:T:C	rs12752515	T	C	t	Sox2_MA0143.3	-7	0	+	0	0	.
chr1	2633047	2633048	chr1:2633048:C:A	rs75325639	C	A	C	Sox2_MA0143.3	15	0	+	0	0	.
chr1	2836661	2836662	chr1:2836662:A:C	rs34583461	A	C	A	Sox2_MA0143.3	26	0	+	0	0	.
chr1	2867526	2867527	chr1:2867527:A:G	rs897636	A	G	G	Sox2_MA0143.3	16	0	-	0	0	.
chr1	2870110	2870111	chr1:2870111:C:T	rs141303608	C	T	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr1	2870128	2870129	chr1:2870129:T:C	rs1563470	T	C	C	Sox2_MA0143.3	3	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr1	2895248	2895249	chr1:2895249:G:A	rs1456465	G	A	G	Sox2_MA0143.3	10	0	+	0	0	.
chr1	2924044	2924045	chr1:2924045:A:T	rs4648434	A	T	T	Sox2_MA0143.3	15	0	-	0	0	.
chr1	2931690	2931691	chr1:2931691:G:A	rs35880479	G	A	G	Sox2_MA0143.3	-2	0	+	0	0	.
chr1	3020985	3020986	chr1:3020986:A:G	rs12033927	A	G	A	Sox2_MA0143.3	18	0	-	0	0	.
chr1	3020986	3020987	chr1:3020987:T:G	rs12034794	T	G	T	Sox2_MA0143.3	17	0	-	0	0	.
chr1	3031613	3031614	chr1:3031614:T:C	rs10909864	T	C	C	Sox2_MA0143.3	16	0	+	0	0	.
chr1	3121965	3121966	chr1:3121966:T:C	rs6704012	T	C	T	Sox2_MA0143.3	-9	0	-	0	0	.
chr1	3151140	3151141	chr1:3151141:C:A	rs9729248	C	A	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr1	3154069	3154070	chr1:3154070:C:G	rs207195	C	G	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr1	3213008	3213009	chr1:3213009:T:A	rs60892783	T	A	T	Sox2_MA0143.3	6	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr1	3215859	3215860	chr1:3215860:T:C	rs2817144	T	C	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr1	3293800	3293801	chr1:3293801:T:C	rs56009721	T	C	C	Sox2_MA0143.3	2	1	+	9.206767037375712	2.900948058900136	CCTTTGTC
chr1	3319807	3319808	chr1:3319808:G:A	rs7531499	G	A	G	Sox2_MA0143.3	23	0	+	0	0	.
chr1	3323634	3323635	chr1:3323635:G:A	rs870465	G	A	G	Sox2_MA0143.3	27	0	-	0	0	.
chr1	3323681	3323682	chr1:3323682:C:T	rs7552861	C	T	C	Sox2_MA0143.3	-20	0	-	0	0	.
chr1	3331533	3331534	chr1:3331534:A:G	rs2483274	A	G	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr1	3367581	3367582	chr1:3367582:C:T	rs75241354	C	T	c	Sox2_MA0143.3	-13	0	+	0	0	.
chr1	3427237	3427238	chr1:3427238:G:A	rs12124567	G	A	A	Sox2_MA0143.3	-10	0	+	0	0	.
chr1	3467268	3467269	chr1:3467269:A:G	rs539031903	A	G	A	Sox2_MA0143.3	-13	0	+	0	0	.
chr1	3507201	3507202	chr1:3507202:T:C	rs10909956	T	C	C	Sox2_MA0143.3	23	0	-	0	0	.
chr1	3530711	3530712	chr1:3530712:G:A	rs4648393	G	A	G	Sox2_MA0143.3	-14	0	+	0	0	.
chr1	3530713	3530714	chr1:3530714:G:A	rs75413213	G	A	G	Sox2_MA0143.3	-12	0	+	0	0	.
chr1	3531025	3531026	chr1:3531026:C:T	rs574744848	C	T	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr1	3672336	3672337	chr1:3672337:G:C	rs3765700	G	C	G	Sox2_MA0143.3	15	0	-	0	0	.
chr1	3804392	3804393	chr1:3804393:C:T	rs12239722	C	T	C	Sox2_MA0143.3	15	0	-	0	0	.
chr1	3804400	3804401	chr1:3804401:A:G	rs2154068	A	G	G	Sox2_MA0143.3	7	1	-	9.613475778572903	9.019595766176417	CCATTGTT
chr1	3837924	3837925	chr1:3837925:G:C	rs12409082	G	C	G	Sox2_MA0143.3	0	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr1	3870631	3870632	chr1:3870632:A:T	rs34019348	A	T	A	Sox2_MA0143.3	4	1	-	8.676919043985553	1.7681642646703322	CCATTGTG
chr1	3914667	3914668	chr1:3914668:A:G	rs35241263	A	G	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr1	3914675	3914676	chr1:3914676:C:T	rs114272920	C	T	C	Sox2_MA0143.3	0	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr1	3919276	3919277	chr1:3919277:A:G	rs114621797	A	G	A	Sox2_MA0143.3	-20	0	-	0	0	.
chr1	3944672	3944673	chr1:3944673:T:C	rs111696901	T	C	T	Sox2_MA0143.3	-4	0	+	0	0	.
chr1	3944700	3944701	chr1:3944701:C:T	rs72849395	C	T	C	Sox2_MA0143.3	24	0	+	0	0	.
chr1	4132532	4132533	chr1:4132533:A:G	rs113194545	A	G	A	Sox2_MA0143.3	3	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr1	4137581	4137582	chr1:4137582:G:A	rs10915445	G	A	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr1	4147638	4147639	chr1:4147639:G:A	rs10915450	G	A	G	Sox2_MA0143.3	23	0	-	0	0	.
chr1	4149593	4149594	chr1:4149594:C:T	rs78691685	C	T	C	Sox2_MA0143.3	16	0	+	0	0	.
chr1	4157161	4157162	chr1:4157162:T:C	rs116403423	T	C	T	Sox2_MA0143.3	23	0	-	0	0	.
chr1	4159262	4159263	chr1:4159263:T:C	rs60139782	T	C	T	Sox2_MA0143.3	14	0	-	0	0	.
chr1	4225365	4225366	chr1:4225366:A:G	rs17415519	A	G	A	Sox2_MA0143.3	15	0	-	0	0	.
chr1	4225371	4225372	chr1:4225372:A:G	rs4654515	A	G	A	Sox2_MA0143.3	9	0	-	0	0	.
chr1	4293999	4294000	chr1:4294000:A:G	rs7529363	A	G	G	Sox2_MA0143.3	2	1	-	9.206767037375712	2.900948058900136	CCTTTGTC
chr1	4295466	4295467	chr1:4295467:G:A	rs77345218	G	A	G	Sox2_MA0143.3	25	0	+	0	0	.
chr1	4310520	4310521	chr1:4310521:C:T	rs7544916	C	T	C	Sox2_MA0143.3	8	0	+	0	0	.
chr1	4310527	4310528	chr1:4310528:C:A	rs1495238	C	A	C	Sox2_MA0143.3	15	0	+	0	0	.
chr1	4330150	4330151	chr1:4330151:C:T	rs501284	C	T	C	Sox2_MA0143.3	1	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr1	4330169	4330170	chr1:4330170:G:A	rs501334	G	A	G	Sox2_MA0143.3	20	0	+	0	0	.
chr1	4348245	4348246	chr1:4348246:C:T	rs585160	C	T	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr1	4359844	4359845	chr1:4359845:A:T	rs102083	A	T	T	Sox2_MA0143.3	7	1	+	3.5547341015215945	9.800647049772198	CCTTTGTA
chr1	4399703	4399704	chr1:4399704:G:A	rs74049404	G	A	G	Sox2_MA0143.3	0	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr1	4406847	4406848	chr1:4406848:T:C	rs577114	T	C	T	Sox2_MA0143.3	-12	0	+	0	0	.
chr1	4421571	4421572	chr1:4421572:G:A	rs4654433	G	A	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr1	4448111	4448112	chr1:4448112:C:T	rs705684	C	T	T	Sox2_MA0143.3	7	1	+	9.206767037375712	9.800647049772198	CCTTTGTC
chr1	4548983	4548984	chr1:4548984:G:A	rs115700124	G	A	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr1	4548989	4548990	chr1:4548990:T:C	rs241221	T	C	T	Sox2_MA0143.3	-18	0	-	0	0	.
chr1	4602471	4602472	chr1:4602472:G:A	rs618751	G	A	G	Sox2_MA0143.3	22	0	-	0	0	.
chr1	4605171	4605172	chr1:4605172:G:A	rs164781	G	A	A	Sox2_MA0143.3	-5	0	+	0	0	.
chr1	4638385	4638386	chr1:4638386:C:T	rs12122716	C	T	T	Sox2_MA0143.3	-16	0	+	0	0	.
chr1	4671480	4671481	chr1:4671481:A:G	rs6679686	A	G	A	Sox2_MA0143.3	27	0	+	0	0	.
chr1	4724726	4724727	chr1:4724727:A:G	rs148569119	A	G	A	Sox2_MA0143.3	-4	0	+	0	0	.
chr1	4775868	4775869	chr1:4775869:C:T	rs144200874	C	T	C	Sox2_MA0143.3	16	0	+	0	0	.
chr1	4788747	4788748	chr1:4788748:A:G	rs12133924	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr1	4932620	4932621	chr1:4932621:C:T	rs6675977	C	T	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr1	4942652	4942653	chr1:4942653:T:C	rs6669905	T	C	T	Sox2_MA0143.3	3	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr1	4951341	4951342	chr1:4951342:A:G	rs9426490	A	G	G	Sox2_MA0143.3	-3	0	+	0	0	.
chr1	4983673	4983674	chr1:4983674:C:A	rs1563791	C	A	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr1	4997673	4997674	chr1:4997674:T:C	rs1466363	T	C	T	Sox2_MA0143.3	20	0	+	0	0	.
chr1	5053850	5053851	chr1:5053851:C:A	rs10799157	C	A	T	Sox2_MA0143.3	23	0	+	0	0	.
chr1	5157612	5157613	chr1:5157613:C:T	rs6672724	C	T	T	Sox2_MA0143.3	-15	0	+	0	0	.
chr1	5159059	5159060	chr1:5159060:C:A	rs147969221	C	A	C	Sox2_MA0143.3	19	0	-	0	0	.
chr1	5200311	5200312	chr1:5200312:T:C	rs2722783	T	C	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr1	5265663	5265664	chr1:5265664:G:T	rs12139398	G	T	G	Sox2_MA0143.3	5	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr1	5270225	5270226	chr1:5270226:C:T	rs494138	C	T	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr1	5391234	5391235	chr1:5391235:A:G	rs36140149	A	G	A	Sox2_MA0143.3	2	1	+	8.676919043985553	2.5582713367092715	CCATTGTG
chr1	5415602	5415603	chr1:5415603:C:A	rs6603835	C	A	A	Sox2_MA0143.3	27	0	-	0	0	.
chr1	5503070	5503071	chr1:5503071:G:A	rs79654929	G	A	G	Sox2_MA0143.3	26	0	-	0	0	.
chr1	5512460	5512461	chr1:5512461:T:C	rs12134185	T	C	T	Sox2_MA0143.3	16	0	+	0	0	.
chr1	5548312	5548313	chr1:5548313:G:C	rs12144320	G	C	G	Sox2_MA0143.3	26	0	-	0	0	.
chr1	5581858	5581859	chr1:5581859:T:C	rs1775420	T	C	T	Sox2_MA0143.3	4	1	+	3.5547341015215945	-3.3540206777936254	CCTTTGTA
chr1	5635900	5635901	chr1:5635901:G:A	rs61671598	G	A	A	Sox2_MA0143.3	12	0	-	0	0	.
chr1	5635917	5635918	chr1:5635918:T:G	rs77597942	T	G	T	Sox2_MA0143.3	-5	0	-	0	0	.
chr1	5644775	5644776	chr1:5644776:A:G	rs17028511	A	G	G	Sox2_MA0143.3	9	0	-	0	0	.
chr1	5668851	5668852	chr1:5668852:A:G	rs72863317	A	G	A	Sox2_MA0143.3	26	0	-	0	0	.
chr1	5682097	5682098	chr1:5682098:A:G	rs707595	A	G	g	Sox2_MA0143.3	-6	0	-	0	0	.
chr1	5707743	5707744	chr1:5707744:T:C	rs556147376	T	C	T	Sox2_MA0143.3	26	0	+	0	0	.
chr1	5729129	5729130	chr1:5729130:C:T	rs2842261	C	T	C	Sox2_MA0143.3	13	0	-	0	0	.
chr1	5779856	5779857	chr1:5779857:A:T	rs6698822	A	T	T	Sox2_MA0143.3	-16	0	-	0	0	.
chr1	5780145	5780146	chr1:5780146:C:G	rs6688250	C	G	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr1	5817424	5817425	chr1:5817425:G:A	rs71509035	G	A	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr1	5885900	5885901	chr1:5885901:C:T	rs140174679	C	T	c	Sox2_MA0143.3	-3	0	+	0	0	.
chr1	5885929	5885930	chr1:5885930:G:A	rs10779788	G	A	G	Sox2_MA0143.3	26	0	+	0	0	.
chr1	5940217	5940218	chr1:5940218:T:C	rs57752624	T	C	T	Sox2_MA0143.3	-2	0	+	0	0	.
chr1	5951122	5951123	chr1:5951123:A:G	rs6658969	A	G	A	Sox2_MA0143.3	12	0	-	0	0	.
chr1	6128316	6128317	chr1:6128317:G:A	rs72632513	G	A	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr1	6137834	6137835	chr1:6137835:G:C	rs2250248	G	C	G	Sox2_MA0143.3	7	1	-	9.019595766176417	8.676919043985553	CCATTGTC
chr1	6240334	6240335	chr1:6240335:T:C	rs56064414	T	C	T	Sox2_MA0143.3	-14	0	-	0	0	.
chr1	6240443	6240444	chr1:6240444:G:C	rs7525357	G	C	G	Sox2_MA0143.3	-9	0	+	0	0	.
chr1	6248634	6248635	chr1:6248635:A:G	rs12744452	A	G	A	Sox2_MA0143.3	18	0	-	0	0	.
chr1	6270038	6270039	chr1:6270039:G:A	rs76564376	G	A	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr1	6271893	6271894	chr1:6271894:G:A	rs753204055	G	A	G	Sox2_MA0143.3	12	0	-	0	0	.
chr1	6344170	6344171	chr1:6344171:A:G	rs3789479	A	G	A	Sox2_MA0143.3	10	0	-	0	0	.
chr1	6355186	6355187	chr1:6355187:C:T	rs9662106	C	T	C	Sox2_MA0143.3	27	0	+	0	0	.
chr1	6390475	6390476	chr1:6390476:A:G	rs4409679	A	G	G	Sox2_MA0143.3	23	0	-	0	0	.
chr1	6485493	6485494	chr1:6485494:G:A	rs1011137538	G	A	g	Sox2_MA0143.3	-13	0	+	0	0	.
chr1	6519460	6519461	chr1:6519461:G:C	rs17438786	G	C	G	Sox2_MA0143.3	0	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr1	6584967	6584968	chr1:6584968:G:C	rs146174847	G	C	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr1	6601461	6601462	chr1:6601462:G:A	rs141332981	G	A	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr1	6613580	6613581	chr1:6613581:C:T	rs184671140	C	T	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr1	6613609	6613610	chr1:6613610:G:T	rs116631064	G	T	G	Sox2_MA0143.3	18	0	+	0	0	.
chr1	6619787	6619788	chr1:6619788:C:T	rs2072948	C	T	C	Sox2_MA0143.3	0	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr1	6623131	6623132	chr1:6623132:C:T	rs60457384	C	T	C	Sox2_MA0143.3	9	0	+	0	0	.
chr1	6672363	6672364	chr1:6672364:G:A	rs201151	G	A	G	Sox2_MA0143.3	16	0	-	0	0	.
chr1	6737623	6737624	chr1:6737624:G:A	rs449250	G	A	A	Sox2_MA0143.3	15	0	+	0	0	.
chr1	6789075	6789076	chr1:6789076:C:T	rs76604769	C	T	C	Sox2_MA0143.3	18	0	+	0	0	.
chr1	6819918	6819919	chr1:6819919:T:C	rs146253888	T	C	T	Sox2_MA0143.3	16	0	+	0	0	.
chr1	6866965	6866966	chr1:6866966:T:C	rs17029963	T	C	T	Sox2_MA0143.3	-1	0	+	0	0	.
chr1	6912247	6912248	chr1:6912248:G:A	rs17495634	G	A	G	Sox2_MA0143.3	-16	0	-	0	0	.
chr1	6912332	6912333	chr1:6912333:C:T	rs11586867	C	T	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr1	6961209	6961210	chr1:6961210:C:G	rs11581143	C	G	C	Sox2_MA0143.3	13	0	+	0	0	.
chr1	6963832	6963833	chr1:6963833:C:A	rs11802071	C	A	C	Sox2_MA0143.3	11	0	-	0	0	.
chr1	6976240	6976241	chr1:6976241:C:T	rs150265938	C	T	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr1	6991537	6991538	chr1:6991538:C:G	rs116561298	C	G	C	Sox2_MA0143.3	20	0	+	0	0	.
chr1	7038746	7038747	chr1:7038747:T:C	rs12728534	T	C	T	Sox2_MA0143.3	12	0	-	0	0	.
chr1	7062247	7062248	chr1:7062248:G:T	rs6680259	G	T	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr1	7095714	7095715	chr1:7095715:C:T	rs114944036	C	T	C	Sox2_MA0143.3	25	0	+	0	0	.
chr1	7118039	7118040	chr1:7118040:T:G	chr1:7118040:T:G	T	G	T	Sox2_MA0143.3	-6	0	-	0	0	.
chr1	7118040	7118041	chr1:7118041:T:A	chr1:7118041:T:A	T	A	T	Sox2_MA0143.3	-7	0	-	0	0	.
chr1	7118042	7118043	chr1:7118043:C:T	rs148701845	C	T	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr1	7232168	7232169	chr1:7232169:T:C	rs7524258	T	C	T	Sox2_MA0143.3	15	0	+	0	0	.
chr1	7232695	7232696	chr1:7232696:T:C	rs4908450	T	C	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr1	7232711	7232712	chr1:7232712:T:C	rs4908608	T	C	C	Sox2_MA0143.3	6	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr1	7239831	7239832	chr1:7239832:C:T	rs114699405	C	T	C	Sox2_MA0143.3	19	0	+	0	0	.
chr1	7248203	7248204	chr1:7248204:T:C	rs4243825	T	C	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr1	7253054	7253055	chr1:7253055:G:A	rs528824358	G	A	G	Sox2_MA0143.3	25	0	-	0	0	.
chr1	7256607	7256608	chr1:7256608:C:T	rs9988463	C	T	C	Sox2_MA0143.3	20	0	-	0	0	.
chr1	7386074	7386075	chr1:7386075:G:A	rs72853142	G	A	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr1	7404260	7404261	chr1:7404261:G:A	rs72853180	G	A	A	Sox2_MA0143.3	-18	0	+	0	0	.
chr1	7408775	7408776	chr1:7408776:T:A	rs763162	T	A	T	Sox2_MA0143.3	-1	0	-	0	0	.
chr1	7470767	7470768	chr1:7470768:T:C	rs539743513	T	C	T	Sox2_MA0143.3	20	0	+	0	0	.
chr1	7501362	7501363	chr1:7501363:G:A	rs116703186	G	A	G	Sox2_MA0143.3	20	0	+	0	0	.
chr1	7526597	7526598	chr1:7526598:G:T	rs1725225	G	T	T	Sox2_MA0143.3	11	0	-	0	0	.
chr1	7557032	7557033	chr1:7557033:C:T	rs111991861	C	T	C	Sox2_MA0143.3	27	0	+	0	0	.
chr1	7582690	7582691	chr1:7582691:C:T	rs114330125	C	T	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr1	7585638	7585639	chr1:7585639:A:G	rs1997148	A	G	G	Sox2_MA0143.3	22	0	-	0	0	.
chr1	7688891	7688892	chr1:7688892:G:C	rs148684547	G	C	G	Sox2_MA0143.3	-2	0	+	0	0	.
chr1	7752748	7752749	chr1:7752749:A:G	rs150456270	A	G	A	Sox2_MA0143.3	3	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr1	7872929	7872930	chr1:7872930:A:G	rs6684933	A	G	a	Sox2_MA0143.3	2	1	+	9.613475778572903	3.494828071296623	CCATTGTT
chr1	8033371	8033372	chr1:8033372:T:C	rs72634234	T	C	T	Sox2_MA0143.3	-15	0	-	0	0	.
chr1	8113917	8113918	chr1:8113918:C:T	rs4565738	C	T	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr1	8121405	8121406	chr1:8121406:T:C	rs11582641	T	C	T	Sox2_MA0143.3	-20	0	+	0	0	.
chr1	8153366	8153367	chr1:8153367:T:C	rs4908739	T	C	C	Sox2_MA0143.3	23	0	-	0	0	.
chr1	8154713	8154714	chr1:8154714:T:C	rs7339868	T	C	C	Sox2_MA0143.3	15	0	-	0	0	.
chr1	8154742	8154743	chr1:8154743:G:T	rs2100516	G	T	T	Sox2_MA0143.3	-14	0	-	0	0	.
chr1	8238684	8238685	chr1:8238685:A:G	rs189318037	A	G	A	Sox2_MA0143.3	20	0	+	0	0	.
chr1	8329093	8329094	chr1:8329094:G:A	rs80046868	G	A	G	Sox2_MA0143.3	17	0	-	0	0	.
chr1	8351777	8351778	chr1:8351778:G:C	rs116521874	G	C	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr1	8359359	8359360	chr1:8359360:A:G	rs6577484	A	G	A	Sox2_MA0143.3	-2	0	-	0	0	.
chr1	8396852	8396853	chr1:8396853:A:G	rs75969503	A	G	A	Sox2_MA0143.3	-14	0	-	0	0	.
chr1	8412199	8412200	chr1:8412200:T:C	rs182694677	T	C	T	Sox2_MA0143.3	19	0	-	0	0	.
chr1	8424762	8424763	chr1:8424763:A:G	rs301807	A	G	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr1	8598652	8598653	chr1:8598653:T:C	rs1318218	T	C	T	Sox2_MA0143.3	-6	0	+	0	0	.
chr1	8690751	8690752	chr1:8690752:C:T	rs76777915	C	T	C	Sox2_MA0143.3	13	0	-	0	0	.
chr1	8945015	8945016	chr1:8945016:C:T	rs11801889	C	T	T	Sox2_MA0143.3	-18	0	+	0	0	.
chr1	8949410	8949411	chr1:8949411:G:C	rs2274330	G	C	C	Sox2_MA0143.3	23	0	-	0	0	.
chr1	8951477	8951478	chr1:8951478:G:A	rs7540307	G	A	G	Sox2_MA0143.3	11	0	-	0	0	.
chr1	8985279	8985280	chr1:8985280:A:G	rs7525675	A	G	A	Sox2_MA0143.3	3	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr1	8985299	8985300	chr1:8985300:T:G	rs72641595	T	G	T	Sox2_MA0143.3	-17	0	-	0	0	.
chr1	8992654	8992655	chr1:8992655:T:G	rs76423996	T	G	T	Sox2_MA0143.3	-17	0	+	0	0	.
chr1	9002074	9002075	chr1:9002075:A:C	rs7517508	A	C	A	Sox2_MA0143.3	-5	0	+	0	0	.
chr1	9112376	9112377	chr1:9112377:C:T	rs770027	C	T	t	Sox2_MA0143.3	-8	0	-	0	0	.
chr1	9128166	9128167	chr1:9128167:G:C	rs150422520	G	C	G	Sox2_MA0143.3	27	0	+	0	0	.
chr1	9207950	9207951	chr1:9207951:C:T	rs1005939440	C	T	C	Sox2_MA0143.3	14	0	-	0	0	.
chr1	9237811	9237812	chr1:9237812:A:G	rs4908830	A	G	A	Sox2_MA0143.3	27	0	+	0	0	.
chr1	9306339	9306340	chr1:9306340:G:A	rs1294044	G	A	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr1	9306365	9306366	chr1:9306366:T:C	rs531796	T	C	C	Sox2_MA0143.3	11	0	+	0	0	.
chr1	9312294	9312295	chr1:9312295:G:A	rs147260134	G	A	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr1	9355532	9355533	chr1:9355533:G:A	rs3765960	G	A	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr1	9355575	9355576	chr1:9355576:C:T	rs150207660	C	T	C	Sox2_MA0143.3	24	0	+	0	0	.
chr1	9362375	9362376	chr1:9362376:C:T	rs11121389	C	T	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr1	9388589	9388590	chr1:9388590:G:A	rs10864413	G	A	A	Sox2_MA0143.3	-5	0	-	0	0	.
chr1	9424402	9424403	chr1:9424403:C:T	rs11802955	C	T	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr1	9434426	9434427	chr1:9434427:A:G	rs72864362	A	G	A	Sox2_MA0143.3	11	0	-	0	0	.
chr1	9472070	9472071	chr1:9472071:G:A	rs117832319	G	A	G	Sox2_MA0143.3	19	0	-	0	0	.
chr1	9477249	9477250	chr1:9477250:C:T	rs748031292	C	T	C	Sox2_MA0143.3	21	0	-	0	0	.
chr1	9705620	9705621	chr1:9705621:G:C	rs114393604	G	C	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr1	9723346	9723347	chr1:9723347:G:A	rs76096384	G	A	G	Sox2_MA0143.3	26	0	-	0	0	.
chr1	9728094	9728095	chr1:9728095:G:A	rs1141402	G	A	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr1	9805574	9805575	chr1:9805575:G:A	rs1228434	G	A	A	Sox2_MA0143.3	24	0	-	0	0	.
chr1	9931568	9931569	chr1:9931569:C:A	rs113469570	C	A	C	Sox2_MA0143.3	26	0	-	0	0	.
chr1	10057817	10057818	chr1:10057818:A:G	rs78739590	A	G	A	Sox2_MA0143.3	23	0	+	0	0	.
chr1	10064173	10064174	chr1:10064174:T:C	rs72861408	T	C	T	Sox2_MA0143.3	13	0	+	0	0	.
chr1	10067157	10067158	chr1:10067158:A:G	rs75011205	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr1	10067157	10067158	chr1:10067158:A:T	chr1:10067158:A:T	A	T	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr1	10225650	10225651	chr1:10225651:A:G	rs6541085	A	G	G	Sox2_MA0143.3	4	1	-	9.206767037375712	2.2980122580604916	CCTTTGTC
chr1	10318369	10318370	chr1:10318370:A:G	rs12132134	A	G	G	Sox2_MA0143.3	-14	0	+	0	0	.
chr1	10318380	10318381	chr1:10318381:T:C	rs182959334	T	C	t	Sox2_MA0143.3	-3	0	+	0	0	.
chr1	10318392	10318393	chr1:10318393:C:G	rs6703602	C	G	C	Sox2_MA0143.3	9	0	+	0	0	.
chr1	10374223	10374224	chr1:10374224:T:C	rs79992337	T	C	t	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr1	10399616	10399617	chr1:10399617:C:T	rs56014054	C	T	C	Sox2_MA0143.3	14	0	+	0	0	.
chr1	10728884	10728885	chr1:10728885:G:A	rs78892927	G	A	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr1	10738431	10738432	chr1:10738432:C:G	rs34071855	C	G	C	Sox2_MA0143.3	21	0	-	0	0	.
chr1	10945862	10945863	chr1:10945863:G:A	rs11121656	G	A	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr1	10945901	10945902	chr1:10945902:C:T	rs6667195	C	T	C	Sox2_MA0143.3	21	0	+	0	0	.
chr1	11088701	11088702	chr1:11088702:G:A	rs1148485	G	A	A	Sox2_MA0143.3	5	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr1	11155729	11155730	chr1:11155730:C:T	rs59862925	C	T	T	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr1	11199509	11199510	chr1:11199510:C:T	rs182866959	C	T	C	Sox2_MA0143.3	17	0	-	0	0	.
chr1	11246221	11246222	chr1:11246222:G:C	rs4845987	G	C	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr1	11344026	11344027	chr1:11344027:C:G	rs3124634	C	G	C	Sox2_MA0143.3	17	0	+	0	0	.
chr1	11421550	11421551	chr1:11421551:A:G	rs2922235	A	G	A	Sox2_MA0143.3	-12	0	+	0	0	.
chr1	11421555	11421556	chr1:11421556:G:C	rs2922236	G	C	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr1	11459158	11459159	chr1:11459159:C:T	rs6696039	C	T	T	Sox2_MA0143.3	26	0	+	0	0	.
chr1	11459159	11459160	chr1:11459160:G:A	rs12144893	G	A	G	Sox2_MA0143.3	27	0	+	0	0	.
chr1	11460058	11460059	chr1:11460059:C:T	rs7551815	C	T	C	Sox2_MA0143.3	19	0	+	0	0	.
chr1	11462096	11462097	chr1:11462097:C:T	rs35243134	C	T	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr1	11471860	11471861	chr1:11471861:C:T	rs17036930	C	T	C	Sox2_MA0143.3	7	1	+	9.206767037375712	9.800647049772198	CCTTTGTC
chr1	11523070	11523071	chr1:11523071:C:T	rs12759679	C	T	c	Sox2_MA0143.3	13	0	-	0	0	.
chr1	11538006	11538007	chr1:11538007:T:C	rs2594308	T	C	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr1	11557623	11557624	chr1:11557624:T:C	rs2817602	T	C	T	Sox2_MA0143.3	10	0	-	0	0	.
chr1	11642485	11642486	chr1:11642486:G:A	rs141184446	G	A	G	Sox2_MA0143.3	25	0	-	0	0	.
chr1	11675204	11675205	chr1:11675205:C:T	rs2233027	C	T	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr1	11691077	11691078	chr1:11691078:C:T	rs12088541	C	T	C	Sox2_MA0143.3	24	0	+	0	0	.
chr1	11691320	11691321	chr1:11691321:G:A	rs149210177	G	A	G	Sox2_MA0143.3	12	0	+	0	0	.
chr1	11691321	11691322	chr1:11691322:C:T	rs6700817	C	T	C	Sox2_MA0143.3	13	0	+	0	0	.
chr1	11737128	11737129	chr1:11737129:T:C	rs12095517	T	C	T	Sox2_MA0143.3	16	0	-	0	0	.
chr1	11768261	11768262	chr1:11768262:G:A	rs4845881	G	A	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr1	11830047	11830048	chr1:11830048:G:A	rs41275486	G	A	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr1	11832699	11832700	chr1:11832700:A:G	rs75297615	A	G	A	Sox2_MA0143.3	-2	0	+	0	0	.
chr1	11832721	11832722	chr1:11832722:A:G	rs78054341	A	G	A	Sox2_MA0143.3	20	0	+	0	0	.
chr1	11887899	11887900	chr1:11887900:A:G	rs6667637	A	G	A	Sox2_MA0143.3	12	0	-	0	0	.
chr1	11920200	11920201	chr1:11920201:C:T	rs41303873	C	T	c	Sox2_MA0143.3	16	0	-	0	0	.
chr1	11935118	11935119	chr1:11935119:A:G	rs1208984	A	G	A	Sox2_MA0143.3	10	0	-	0	0	.
chr1	12125716	12125717	chr1:12125717:A:G	rs11121876	A	G	A	Sox2_MA0143.3	27	0	+	0	0	.
chr1	12172177	12172178	chr1:12172178:C:T	rs895932558	C	T	C	Sox2_MA0143.3	21	0	-	0	0	.
chr1	12173696	12173697	chr1:12173697:T:C	rs976881	T	C	C	Sox2_MA0143.3	10	0	+	0	0	.
chr1	12182735	12182736	chr1:12182736:T:G	rs587406	T	G	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr1	12188367	12188368	chr1:12188368:T:A	rs500734	T	A	A	Sox2_MA0143.3	27	0	-	0	0	.
chr1	12204297	12204298	chr1:12204298:A:G	rs235219	A	G	G	Sox2_MA0143.3	6	1	-	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr1	12344983	12344984	chr1:12344984:A:G	rs28558814	A	G	A	Sox2_MA0143.3	-6	0	-	0	0	.
chr1	12402072	12402073	chr1:12402073:C:A	rs75257462	C	A	A	Sox2_MA0143.3	9	0	+	0	0	.
chr1	12475309	12475310	chr1:12475310:A:G	rs78108062	A	G	A	Sox2_MA0143.3	3	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr1	12478266	12478267	chr1:12478267:C:T	rs142687401	C	T	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr1	12480968	12480969	chr1:12480969:G:A	rs146923931	G	A	G	Sox2_MA0143.3	26	0	+	0	0	.
chr1	12510170	12510171	chr1:12510171:T:A	rs74324818	T	A	T	Sox2_MA0143.3	-3	0	-	0	0	.
chr1	12510171	12510172	chr1:12510172:C:A	rs80116900	C	A	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr1	12546690	12546691	chr1:12546691:C:A	rs10779770	C	A	A	Sox2_MA0143.3	26	0	-	0	0	.
chr1	12551202	12551203	chr1:12551203:T:G	rs12410652	T	G	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr1	12574156	12574157	chr1:12574157:A:G	rs4845906	A	G	G	Sox2_MA0143.3	13	0	+	0	0	.
chr1	12619843	12619844	chr1:12619844:T:C	rs3000899	T	C	T	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr1	12715847	12715848	chr1:12715848:G:A	rs3000861	G	A	G	Sox2_MA0143.3	-11	0	+	0	0	.
chr1	12852234	12852235	chr1:12852235:A:G	rs12734121	A	G	N	Sox2_MA0143.3	13	0	-	0	0	.
chr1	13044158	13044159	chr1:13044159:C:G	rs1266081276	C	G	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr1	13226775	13226776	chr1:13226776:A:G	rs375596674	A	G	A	Sox2_MA0143.3	12	0	-	0	0	.
chr1	13241680	13241681	chr1:13241681:A:G	rs1280282979	A	G	g	Sox2_MA0143.3	23	0	-	0	0	.
chr1	13541016	13541017	chr1:13541017:G:A	rs12077609	G	A	G	Sox2_MA0143.3	11	0	+	0	0	.
chr1	13549634	13549635	chr1:13549635:G:A	rs76996492	G	A	G	Sox2_MA0143.3	18	0	-	0	0	.
chr1	13564556	13564557	chr1:13564557:A:G	rs11577780	A	G	A	Sox2_MA0143.3	25	0	+	0	0	.
chr1	13584897	13584898	chr1:13584898:C:T	rs1148454	C	T	C	Sox2_MA0143.3	13	0	+	0	0	.
chr1	13783710	13783711	chr1:13783711:G:A	rs1203650	G	A	G	Sox2_MA0143.3	9	0	+	0	0	.
chr1	13814546	13814547	chr1:13814547:C:T	rs7517964	C	T	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr1	13908526	13908527	chr1:13908527:G:A	rs12142455	G	A	A	Sox2_MA0143.3	-15	0	+	0	0	.
chr1	13908546	13908547	chr1:13908547:G:A	rs900353321	G	A	G	Sox2_MA0143.3	5	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr1	13926527	13926528	chr1:13926528:G:A	rs759899886	G	A	G	Sox2_MA0143.3	1	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr1	13950912	13950913	chr1:13950913:C:T	rs732264	C	T	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr1	13994854	13994855	chr1:13994855:T:G	rs12038457	T	G	T	Sox2_MA0143.3	-13	0	-	0	0	.
chr1	14013732	14013733	chr1:14013733:G:T	rs10927994	G	T	G	Sox2_MA0143.3	19	0	+	0	0	.
chr1	14397248	14397249	chr1:14397249:A:G	rs61125940	A	G	A	Sox2_MA0143.3	4	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr1	14419898	14419899	chr1:14419899:G:A	rs535008170	G	A	G	Sox2_MA0143.3	9	0	-	0	0	.
chr1	14419910	14419911	chr1:14419911:T:C	rs79414274	T	C	T	Sox2_MA0143.3	-3	0	-	0	0	.
chr1	14499532	14499533	chr1:14499533:A:G	rs12733612	A	G	A	Sox2_MA0143.3	3	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr1	14539991	14539992	chr1:14539992:A:C	rs3933359	A	C	C	Sox2_MA0143.3	21	0	+	0	0	.
chr1	14557801	14557802	chr1:14557802:G:A	rs12031919	G	A	G	Sox2_MA0143.3	23	0	+	0	0	.
chr1	14607323	14607324	chr1:14607324:A:G	rs10754864	A	G	A	Sox2_MA0143.3	2	1	-	8.864090315184848	2.5582713367092715	CCTTTGTG
chr1	14646533	14646534	chr1:14646534:C:T	rs76751311	C	T	C	Sox2_MA0143.3	11	0	+	0	0	.
chr1	14653421	14653422	chr1:14653422:C:T	rs540346895	C	T	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr1	14706803	14706804	chr1:14706804:C:T	rs7520134	C	T	T	Sox2_MA0143.3	17	0	-	0	0	.
chr1	14729678	14729679	chr1:14729679:A:G	rs2050126	A	G	A	Sox2_MA0143.3	7	1	+	3.5547341015215945	8.864090315184848	CCTTTGTA
chr1	14736050	14736051	chr1:14736051:C:A	rs111662933	C	A	C	Sox2_MA0143.3	0	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr1	14849420	14849421	chr1:14849421:A:G	rs61772356	A	G	G	Sox2_MA0143.3	21	0	-	0	0	.
chr1	14901740	14901741	chr1:14901741:G:T	rs6687591	G	T	T	Sox2_MA0143.3	20	0	+	0	0	.
chr1	14908060	14908061	chr1:14908061:G:C	rs10449293	G	C	C	Sox2_MA0143.3	23	0	+	0	0	.
chr1	14950029	14950030	chr1:14950030:T:C	rs16851049	T	C	T	Sox2_MA0143.3	25	0	-	0	0	.
chr1	14959599	14959600	chr1:14959600:A:G	rs12068752	A	G	G	Sox2_MA0143.3	19	0	+	0	0	.
chr1	15078592	15078593	chr1:15078593:C:G	rs10489454	C	G	C	Sox2_MA0143.3	22	0	-	0	0	.
chr1	15117401	15117402	chr1:15117402:G:A	rs2235785	G	A	A	Sox2_MA0143.3	-6	0	+	0	0	.
chr1	15139948	15139949	chr1:15139949:C:T	rs77094183	C	T	C	Sox2_MA0143.3	19	0	-	0	0	.
chr1	15140569	15140570	chr1:15140570:T:C	rs2206759	T	C	T	Sox2_MA0143.3	-15	0	+	0	0	.
chr1	15189334	15189335	chr1:15189335:C:T	rs7552637	C	T	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr1	15213763	15213764	chr1:15213764:A:C	rs55809473	A	C	A	Sox2_MA0143.3	-5	0	-	0	0	.
chr1	15234403	15234404	chr1:15234404:T:G	rs767255	T	G	T	Sox2_MA0143.3	25	0	-	0	0	.
chr1	15328603	15328604	chr1:15328604:A:C	rs182821529	A	C	A	Sox2_MA0143.3	-8	0	-	0	0	.
chr1	15356048	15356049	chr1:15356049:T:C	rs192397304	T	C	T	Sox2_MA0143.3	4	1	+	8.864090315184848	1.9553355358696274	CCTTTGTG
chr1	15381356	15381357	chr1:15381357:G:A	rs116545211	G	A	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr1	15386388	15386389	chr1:15386389:C:A	rs2249218	C	A	A	Sox2_MA0143.3	22	0	+	0	0	.
chr1	15412408	15412409	chr1:15412409:T:C	rs555887672	T	C	T	Sox2_MA0143.3	-9	0	-	0	0	.
chr1	15502691	15502692	chr1:15502692:G:A	rs4233533	G	A	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr1	15571338	15571339	chr1:15571339:G:A	rs150303036	G	A	G	Sox2_MA0143.3	10	0	+	0	0	.
chr1	15679819	15679820	chr1:15679820:C:T	rs34426856	C	T	T	Sox2_MA0143.3	-19	0	-	0	0	.
chr1	15687632	15687633	chr1:15687633:C:T	rs72878889	C	T	C	Sox2_MA0143.3	1	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr1	15717905	15717906	chr1:15717906:G:A	rs16851970	G	A	G	Sox2_MA0143.3	26	0	+	0	0	.
chr1	15735457	15735458	chr1:15735458:T:C	rs142190582	T	C	T	Sox2_MA0143.3	23	0	-	0	0	.
chr1	15735470	15735471	chr1:15735471:G:A	rs35352784	G	A	G	Sox2_MA0143.3	10	0	-	0	0	.
chr1	15739118	15739119	chr1:15739119:T:C	rs75686813	T	C	T	Sox2_MA0143.3	-4	0	-	0	0	.
chr1	15760764	15760765	chr1:15760765:C:T	rs938295	C	T	C	Sox2_MA0143.3	10	0	+	0	0	.
chr1	15815625	15815626	chr1:15815626:T:G	rs17450168	T	G	T	Sox2_MA0143.3	-12	0	-	0	0	.
chr1	15815907	15815908	chr1:15815908:A:G	rs12029984	A	G	A	Sox2_MA0143.3	13	0	-	0	0	.
chr1	15815931	15815932	chr1:15815932:C:T	rs16852024	C	T	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr1	15836249	15836250	chr1:15836250:A:T	rs903723590	A	T	A	Sox2_MA0143.3	-10	0	+	0	0	.
chr1	15837624	15837625	chr1:15837625:C:G	rs185575341	C	G	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr1	15846277	15846278	chr1:15846278:G:C	rs112980756	G	C	G	Sox2_MA0143.3	17	0	+	0	0	.
chr1	15940651	15940652	chr1:15940652:C:T	rs848215	C	T	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr1	15950362	15950363	chr1:15950363:G:T	rs79643981	G	T	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr1	15953794	15953795	chr1:15953795:G:A	rs1398309893	G	A	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr1	15956528	15956529	chr1:15956529:C:T	rs56048916	C	T	T	Sox2_MA0143.3	14	0	-	0	0	.
chr1	15967096	15967097	chr1:15967097:C:T	rs848200	C	T	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr1	15976038	15976039	chr1:15976039:G:A	rs182641897	G	A	G	Sox2_MA0143.3	27	0	-	0	0	.
chr1	15997279	15997280	chr1:15997280:A:C	rs1763625	A	C	C	Sox2_MA0143.3	14	0	-	0	0	.
chr1	16062413	16062414	chr1:16062414:T:C	rs2863457	T	C	T	Sox2_MA0143.3	24	0	-	0	0	.
chr1	16068409	16068410	chr1:16068410:C:G	rs887520598	C	G	C	Sox2_MA0143.3	24	0	-	0	0	.
chr1	16094082	16094083	chr1:16094083:A:G	rs56384366	A	G	A	Sox2_MA0143.3	10	0	-	0	0	.
chr1	16102130	16102131	chr1:16102131:G:C	rs61769921	G	C	G	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr1	16167571	16167572	chr1:16167572:C:A	rs149510151	C	A	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr1	16243264	16243265	chr1:16243265:T:A	rs964041	T	A	T	Sox2_MA0143.3	27	0	+	0	0	.
chr1	16249106	16249107	chr1:16249107:A:T	rs544699125	A	T	A	Sox2_MA0143.3	19	0	-	0	0	.
chr1	16287164	16287165	chr1:16287165:A:G	rs12120676	A	G	G	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr1	16342437	16342438	chr1:16342438:T:C	rs11260732	T	C	T	Sox2_MA0143.3	2	1	-	9.613475778572903	3.494828071296623	CCATTGTT
chr1	16405723	16405724	chr1:16405724:C:T	rs61769438	C	T	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr1	16481729	16481730	chr1:16481730:C:G	rs11260765	C	G	.	Sox2_MA0143.3	12	0	+	0	0	.
chr1	16498703	16498704	chr1:16498704:T:C	rs191107563	T	C	.	Sox2_MA0143.3	19	0	-	0	0	.
chr1	16499753	16499754	chr1:16499754:G:A	rs78509555	G	A	.	Sox2_MA0143.3	13	0	+	0	0	.
chr1	16509314	16509315	chr1:16509315:G:C	chr1:16509315:G:C	G	C	.	Sox2_MA0143.3	-6	0	+	0	0	.
chr1	16509317	16509318	chr1:16509318:C:T	rs61769477	C	T	.	Sox2_MA0143.3	-3	0	+	0	0	.
chr1	16638660	16638661	chr1:16638661:T:C	rs11260851	T	C	.	Sox2_MA0143.3	21	0	-	0	0	.
chr1	16645971	16645972	chr1:16645972:C:T	rs61772241	C	T	.	Sox2_MA0143.3	1	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr1	16645974	16645975	chr1:16645975:T:C	rs61772242	T	C	.	Sox2_MA0143.3	4	1	+	8.864090315184848	1.9553355358696274	CCTTTGTG
chr1	16645988	16645989	chr1:16645989:C:T	rs866020258	C	T	.	Sox2_MA0143.3	18	0	+	0	0	.
chr1	16646803	16646804	chr1:16646804:A:G	rs11582705	A	G	.	Sox2_MA0143.3	13	0	-	0	0	.
chr1	16646818	16646819	chr1:16646819:G:T	rs56361910	G	T	.	Sox2_MA0143.3	-2	0	-	0	0	.
chr1	16678803	16678804	chr1:16678804:T:G	rs2761502	T	G	.	Sox2_MA0143.3	-10	0	-	0	0	.
chr1	16715938	16715939	chr1:16715939:G:A	rs9660836	G	A	.	Sox2_MA0143.3	8	0	-	0	0	.
chr1	16726143	16726144	chr1:16726144:G:A	rs546855	G	A	.	Sox2_MA0143.3	-10	0	+	0	0	.
chr1	16726999	16727000	chr1:16727000:A:G	rs4301623	A	G	.	Sox2_MA0143.3	4	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr1	16894174	16894175	chr1:16894175:C:T	rs7366350	C	T	.	Sox2_MA0143.3	-14	0	-	0	0	.
chr1	16894608	16894609	chr1:16894609:A:G	rs11802431	A	G	.	Sox2_MA0143.3	-1	0	-	0	0	.
chr1	16901642	16901643	chr1:16901643:A:G	rs6421396	A	G	.	Sox2_MA0143.3	2	1	+	8.676919043985553	2.5582713367092715	CCATTGTG
chr1	16905619	16905620	chr1:16905620:C:A	rs532999803	C	A	.	Sox2_MA0143.3	-7	0	+	0	0	.
chr1	16905622	16905623	chr1:16905623:G:A	rs115276588	G	A	.	Sox2_MA0143.3	-4	0	+	0	0	.
chr1	16905648	16905649	chr1:16905649:C:T	rs1297280777	C	T	.	Sox2_MA0143.3	22	0	+	0	0	.
chr1	17075663	17075664	chr1:17075664:G:A	rs3818033	G	A	A	Sox2_MA0143.3	-14	0	+	0	0	.
chr1	17097806	17097807	chr1:17097807:T:C	rs2746510	T	C	t	Sox2_MA0143.3	-8	0	+	0	0	.
chr1	17097834	17097835	chr1:17097835:G:A	rs2647183	G	A	G	Sox2_MA0143.3	20	0	+	0	0	.
chr1	17097841	17097842	chr1:17097842:T:C	rs2746509	T	C	C	Sox2_MA0143.3	27	0	+	0	0	.
chr1	17110081	17110082	chr1:17110082:G:A	rs182308612	G	A	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr1	17110113	17110114	chr1:17110114:C:A	rs75243445	C	A	C	Sox2_MA0143.3	14	0	+	0	0	.
chr1	17155545	17155546	chr1:17155546:C:T	rs10888006	C	T	T	Sox2_MA0143.3	10	0	-	0	0	.
chr1	17196055	17196056	chr1:17196056:G:T	rs140792786	G	T	G	Sox2_MA0143.3	16	0	-	0	0	.
chr1	17206512	17206513	chr1:17206513:T:C	rs4244378	T	C	C	Sox2_MA0143.3	10	0	+	0	0	.
chr1	17286007	17286008	chr1:17286008:T:C	rs72646796	T	C	T	Sox2_MA0143.3	20	0	-	0	0	.
chr1	17315188	17315189	chr1:17315189:T:C	rs1886300	T	C	T	Sox2_MA0143.3	-9	0	+	0	0	.
chr1	17336795	17336796	chr1:17336796:C:T	rs1748030	C	T	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr1	17336827	17336828	chr1:17336828:G:C	rs1635593	G	C	G	Sox2_MA0143.3	14	0	+	0	0	.
chr1	17375785	17375786	chr1:17375786:T:C	rs115528420	T	C	T	Sox2_MA0143.3	-18	0	+	0	0	.
chr1	17438559	17438560	chr1:17438560:G:C	rs202107696	G	C	g	Sox2_MA0143.3	-4	0	-	0	0	.
chr1	17472483	17472484	chr1:17472484:G:T	rs12033102	G	T	-	Sox2_MA0143.3	14	0	-	0	0	.
chr1	17494520	17494521	chr1:17494521:C:A	rs6586555	C	A	A	Sox2_MA0143.3	-18	0	+	0	0	.
chr1	17681745	17681746	chr1:17681746:C:T	rs75044419	C	T	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr1	17725546	17725547	chr1:17725547:C:T	rs16830675	C	T	C	Sox2_MA0143.3	1	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr1	17904854	17904855	chr1:17904855:T:C	rs620547	T	C	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr1	18010408	18010409	chr1:18010409:T:C	rs1192618	T	C	T	Sox2_MA0143.3	-17	0	+	0	0	.
chr1	18047244	18047245	chr1:18047245:T:C	rs1551478	T	C	T	Sox2_MA0143.3	16	0	+	0	0	.
chr1	18145242	18145243	chr1:18145243:G:A	rs11261094	G	A	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr1	18145359	18145360	chr1:18145360:G:A	rs9730168	G	A	A	Sox2_MA0143.3	19	0	-	0	0	.
chr1	18249888	18249889	chr1:18249889:T:C	rs116764298	T	C	T	Sox2_MA0143.3	27	0	+	0	0	.
chr1	18262204	18262205	chr1:18262205:G:A	rs78109190	G	A	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr1	18299224	18299225	chr1:18299225:T:C	rs223162	T	C	C	Sox2_MA0143.3	15	0	-	0	0	.
chr1	18319736	18319737	chr1:18319737:T:C	rs1040623	T	C	t	Sox2_MA0143.3	15	0	+	0	0	.
chr1	18412014	18412015	chr1:18412015:G:A	rs60798442	G	A	G	Sox2_MA0143.3	9	0	+	0	0	.
chr1	18430466	18430467	chr1:18430467:C:A	rs6699137	C	A	G	Sox2_MA0143.3	1	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr1	18448198	18448199	chr1:18448199:A:G	rs2946535	A	G	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr1	18643754	18643755	chr1:18643755:C:T	chr1:18643755:C:T	C	T	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr1	18769468	18769469	chr1:18769469:A:G	rs1999961	A	G	G	Sox2_MA0143.3	10	0	+	0	0	.
chr1	18786073	18786074	chr1:18786074:A:T	rs76369903	A	T	A	Sox2_MA0143.3	21	0	-	0	0	.
chr1	18808719	18808720	chr1:18808720:G:A	rs7417542	G	A	G	Sox2_MA0143.3	-16	0	-	0	0	.
chr1	18835372	18835373	chr1:18835373:C:T	rs11261088	C	T	C	Sox2_MA0143.3	25	0	-	0	0	.
chr1	18860101	18860102	chr1:18860102:G:A	rs72651850	G	A	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr1	18868997	18868998	chr1:18868998:A:G	rs111289603	A	G	A	Sox2_MA0143.3	7	1	-	9.613475778572903	9.019595766176417	CCATTGTT
chr1	18934913	18934914	chr1:18934914:T:C	rs992661	T	C	t	Sox2_MA0143.3	4	1	+	3.5547341015215945	-3.3540206777936254	CCTTTGTA
chr1	18960144	18960145	chr1:18960145:G:A	rs28510633	G	A	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr1	19001287	19001288	chr1:19001288:G:A	rs28382321	G	A	G	Sox2_MA0143.3	14	0	-	0	0	.
chr1	19006279	19006280	chr1:19006280:T:C	rs16862452	T	C	T	Sox2_MA0143.3	4	1	+	8.864090315184848	1.9553355358696274	CCTTTGTG
chr1	19006296	19006297	chr1:19006297:C:T	rs74228436	C	T	C	Sox2_MA0143.3	21	0	+	0	0	.
chr1	19028764	19028765	chr1:19028765:C:A	rs9426633	C	A	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr1	19032586	19032587	chr1:19032587:A:C	rs61763736	A	C	A	Sox2_MA0143.3	10	0	-	0	0	.
chr1	19123839	19123840	chr1:19123840:T:C	rs6696220	T	C	T	Sox2_MA0143.3	-8	0	+	0	0	.
chr1	19204974	19204975	chr1:19204975:G:A	rs76951297	G	A	G	Sox2_MA0143.3	-16	0	-	0	0	.
chr1	19257509	19257510	chr1:19257510:G:A	rs1042380	G	A	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr1	19313805	19313806	chr1:19313806:A:G	rs61764953	A	G	A	Sox2_MA0143.3	-11	0	-	0	0	.
chr1	19390885	19390886	chr1:19390886:G:A	rs56405904	G	A	G	Sox2_MA0143.3	13	0	-	0	0	.
chr1	19408286	19408287	chr1:19408287:A:G	rs12125806	A	G	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr1	19436864	19436865	chr1:19436865:G:A	rs1208437983	G	A	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr1	19444473	19444474	chr1:19444474:C:T	rs10917452	C	T	T	Sox2_MA0143.3	11	0	-	0	0	.
chr1	19457151	19457152	chr1:19457152:C:T	rs1340422	C	T	T	Sox2_MA0143.3	9	0	-	0	0	.
chr1	19505574	19505575	chr1:19505575:A:G	rs115908591	A	G	A	Sox2_MA0143.3	6	1	-	9.613475778572903	2.7047209992576837	CCATTGTT
chr1	19648174	19648175	chr1:19648175:A:G	rs2314331	A	G	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr1	19659135	19659136	chr1:19659136:C:G	rs34403938	C	G	G	Sox2_MA0143.3	12	0	+	0	0	.
chr1	19817838	19817839	chr1:19817839:G:A	rs17396847	G	A	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr1	19925482	19925483	chr1:19925483:G:A	rs3753821	G	A	G	Sox2_MA0143.3	11	0	+	0	0	.
chr1	19956090	19956091	chr1:19956091:T:C	rs61769122	T	C	T	Sox2_MA0143.3	-5	0	+	0	0	.
chr1	20080596	20080597	chr1:20080597:A:C	rs571915	A	C	A	Sox2_MA0143.3	26	0	-	0	0	.
chr1	20268294	20268295	chr1:20268295:C:T	rs10799623	C	T	T	Sox2_MA0143.3	-13	0	-	0	0	.
chr1	20344298	20344299	chr1:20344299:G:A	rs731047	G	A	G	Sox2_MA0143.3	0	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr1	20477571	20477572	chr1:20477572:T:G	rs97922	T	G	T	Sox2_MA0143.3	-8	0	+	0	0	.
chr1	20480579	20480580	chr1:20480580:G:T	rs75810319	G	T	G	Sox2_MA0143.3	25	0	-	0	0	.
chr1	20612395	20612396	chr1:20612396:A:C	rs61781966	A	C	A	Sox2_MA0143.3	2	1	+	8.676919043985553	2.5582713367092715	CCATTGTG
chr1	20753735	20753736	chr1:20753736:T:C	chr1:20753736:T:C	T	C	T	Sox2_MA0143.3	22	0	-	0	0	.
chr1	20965232	20965233	chr1:20965233:A:C	rs540214165	A	C	A	Sox2_MA0143.3	-8	0	-	0	0	.
chr1	21177351	21177352	chr1:21177352:C:T	rs114235738	C	T	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr1	21218241	21218242	chr1:21218242:C:T	rs3026912	C	T	C	Sox2_MA0143.3	8	0	-	0	0	.
chr1	21221023	21221024	chr1:21221024:G:T	rs28368050	G	T	G	Sox2_MA0143.3	8	0	-	0	0	.
chr1	21294885	21294886	chr1:21294886:C:T	rs34263283	C	T	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr1	21294902	21294903	chr1:21294903:G:A	rs75724054	G	A	G	Sox2_MA0143.3	11	0	+	0	0	.
chr1	21309575	21309576	chr1:21309576:A:C	rs568686930	A	C	A	Sox2_MA0143.3	-5	0	+	0	0	.
chr1	21313631	21313632	chr1:21313632:G:A	rs79128934	G	A	G	Sox2_MA0143.3	15	0	-	0	0	.
chr1	21320037	21320038	chr1:21320038:G:T	rs213018	G	T	T	Sox2_MA0143.3	-2	0	-	0	0	.
chr1	21379215	21379216	chr1:21379216:T:G	rs61781623	T	G	T	Sox2_MA0143.3	16	0	-	0	0	.
chr1	21379231	21379232	chr1:21379232:G:C	rs72657141	G	C	G	Sox2_MA0143.3	0	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr1	21521054	21521055	chr1:21521055:T:C	rs12145027	T	C	T	Sox2_MA0143.3	-6	0	+	0	0	.
chr1	21534391	21534392	chr1:21534392:T:G	rs61158180	T	G	T	Sox2_MA0143.3	-1	0	-	0	0	.
chr1	21574324	21574325	chr1:21574325:A:G	rs753141034	A	G	A	Sox2_MA0143.3	2	1	+	8.676919043985553	2.5582713367092715	CCATTGTG
chr1	21574783	21574784	chr1:21574784:A:G	rs1536934	A	G	A	Sox2_MA0143.3	11	0	+	0	0	.
chr1	21574799	21574800	chr1:21574800:G:A	rs192792101	G	A	G	Sox2_MA0143.3	27	0	+	0	0	.
chr1	21595383	21595384	chr1:21595384:C:A	rs536522996	C	A	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr1	21662291	21662292	chr1:21662292:A:C	rs143837433	A	C	A	Sox2_MA0143.3	-4	0	+	0	0	.
chr1	21750144	21750145	chr1:21750145:C:T	rs7538354	C	T	C	Sox2_MA0143.3	-5	0	-	0	0	.
chr1	21841816	21841817	chr1:21841817:A:G	rs12043008	A	G	G	Sox2_MA0143.3	10	0	-	0	0	.
chr1	21902160	21902161	chr1:21902161:C:T	rs72870233	C	T	c	Sox2_MA0143.3	10	0	-	0	0	.
chr1	21915050	21915051	chr1:21915051:C:T	rs71637001	C	T	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr1	21921004	21921005	chr1:21921005:C:T	rs12131384	C	T	C	Sox2_MA0143.3	25	0	+	0	0	.
chr1	21924829	21924830	chr1:21924830:A:C	rs964847494	A	C	A	Sox2_MA0143.3	-14	0	-	0	0	.
chr1	21937483	21937484	chr1:21937484:C:A	rs184332240	C	A	-	Sox2_MA0143.3	12	0	+	0	0	.
chr1	21938857	21938858	chr1:21938858:G:A	rs79899643	G	A	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr1	21952766	21952767	chr1:21952767:C:A	rs12118516	C	A	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr1	21974996	21974997	chr1:21974997:G:A	rs28553334	G	A	G	Sox2_MA0143.3	17	0	+	0	0	.
chr1	22019515	22019516	chr1:22019516:G:A	rs2501296	G	A	A	Sox2_MA0143.3	-12	0	+	0	0	.
chr1	22024340	22024341	chr1:22024341:T:C	rs2473307	T	C	T	Sox2_MA0143.3	-4	0	-	0	0	.
chr1	22065106	22065107	chr1:22065107:A:G	rs2501269	A	G	G	Sox2_MA0143.3	-3	0	-	0	0	.
chr1	22078708	22078709	chr1:22078709:T:A	rs75284716	T	A	T	Sox2_MA0143.3	25	0	+	0	0	.
chr1	22139326	22139327	chr1:22139327:T:C	rs61768001	T	C	T	Sox2_MA0143.3	-14	0	+	0	0	.
chr1	22229499	22229500	chr1:22229500:G:T	rs2491210	G	T	G	Sox2_MA0143.3	21	0	-	0	0	.
chr1	22275908	22275909	chr1:22275909:G:A	rs147560299	G	A	g	Sox2_MA0143.3	-14	0	-	0	0	.
chr1	22297369	22297370	chr1:22297370:G:A	rs10799744	G	A	G	Sox2_MA0143.3	27	0	-	0	0	.
chr1	22321985	22321986	chr1:22321986:G:T	rs113784679	G	T	G	Sox2_MA0143.3	16	0	+	0	0	.
chr1	22321993	22321994	chr1:22321994:A:G	chr1:22321994:A:G	A	G	A	Sox2_MA0143.3	24	0	+	0	0	.
chr1	22401622	22401623	chr1:22401623:A:G	rs11580257	A	G	G	Sox2_MA0143.3	-14	0	+	0	0	.
chr1	22429405	22429406	chr1:22429406:C:G	rs115342658	C	G	C	Sox2_MA0143.3	20	0	-	0	0	.
chr1	22491223	22491224	chr1:22491224:A:G	rs12566074	A	G	A	Sox2_MA0143.3	11	0	-	0	0	.
chr1	22590784	22590785	chr1:22590785:G:C	rs11578578	G	C	G	Sox2_MA0143.3	27	0	+	0	0	.
chr1	22677525	22677526	chr1:22677526:G:T	rs7549888	G	T	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr1	22691215	22691216	chr1:22691216:G:A	rs112986048	G	A	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr1	22738280	22738281	chr1:22738281:C:T	rs117018545	C	T	C	Sox2_MA0143.3	27	0	+	0	0	.
chr1	22789445	22789446	chr1:22789446:A:G	rs11801544	A	G	a	Sox2_MA0143.3	-14	0	-	0	0	.
chr1	22832196	22832197	chr1:22832197:T:C	rs10737467	T	C	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr1	22832207	22832208	chr1:22832208:T:C	rs10737468	T	C	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr1	22834529	22834530	chr1:22834530:T:C	rs56089435	T	C	T	Sox2_MA0143.3	24	0	+	0	0	.
chr1	22842763	22842764	chr1:22842764:T:G	rs12410872	T	G	T	Sox2_MA0143.3	-20	0	+	0	0	.
chr1	22951226	22951227	chr1:22951227:G:A	rs12046124	G	A	G	Sox2_MA0143.3	7	1	-	9.019595766176417	9.613475778572903	CCATTGTC
chr1	22973238	22973239	chr1:22973239:A:G	rs6689953	A	G	g	Sox2_MA0143.3	4	1	-	8.864090315184848	1.9553355358696274	CCTTTGTG
chr1	23564290	23564291	chr1:23564291:C:T	rs909536	C	T	T	Sox2_MA0143.3	20	0	-	0	0	.
chr1	23585806	23585807	chr1:23585807:C:T	rs115443652	C	T	C	Sox2_MA0143.3	22	0	-	0	0	.
chr1	23585822	23585823	chr1:23585823:A:G	rs16828588	A	G	A	Sox2_MA0143.3	6	1	-	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr1	23777872	23777873	chr1:23777873:A:G	chr1:23777873:A:G	A	G	A	Sox2_MA0143.3	23	0	-	0	0	.
chr1	23800573	23800574	chr1:23800574:G:A	rs180840609	G	A	G	Sox2_MA0143.3	14	0	-	0	0	.
chr1	23800600	23800601	chr1:23800601:C:T	rs559016050	C	T	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr1	23872848	23872849	chr1:23872849:A:C	rs2501425	A	C	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr1	23872873	23872874	chr1:23872874:G:A	rs2501426	G	A	A	Sox2_MA0143.3	13	0	+	0	0	.
chr1	23951582	23951583	chr1:23951583:C:T	rs61774311	C	T	c	Sox2_MA0143.3	-5	0	+	0	0	.
chr1	23951604	23951605	chr1:23951605:A:T	rs61774312	A	T	t	Sox2_MA0143.3	17	0	+	0	0	.
chr1	23951927	23951928	chr1:23951928:T:G	rs76145442	T	G	t	Sox2_MA0143.3	-4	0	-	0	0	.
chr1	23960046	23960047	chr1:23960047:C:T	rs765656621	C	T	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr1	23964860	23964861	chr1:23964861:T:C	rs762057984	T	C	T	Sox2_MA0143.3	23	0	-	0	0	.
chr1	24003386	24003387	chr1:24003387:C:T	rs113752777	C	T	C	Sox2_MA0143.3	18	0	+	0	0	.
chr1	24034338	24034339	chr1:24034339:G:A	rs34812119	G	A	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr1	24078497	24078498	chr1:24078498:T:C	rs12719820	T	C	T	Sox2_MA0143.3	-7	0	+	0	0	.
chr1	24119545	24119546	chr1:24119546:A:G	rs115289036	A	G	A	Sox2_MA0143.3	-13	0	-	0	0	.
chr1	24124090	24124091	chr1:24124091:C:T	rs540535961	C	T	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr1	24151539	24151540	chr1:24151540:C:T	rs61740200	C	T	C	Sox2_MA0143.3	18	0	-	0	0	.
chr1	24234431	24234432	chr1:24234432:C:A	rs575323330	C	A	c	Sox2_MA0143.3	-16	0	+	0	0	.
chr1	24308799	24308800	chr1:24308800:C:G	rs150979390	C	G	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr1	24308824	24308825	chr1:24308825:G:C	rs16829432	G	C	G	Sox2_MA0143.3	14	0	+	0	0	.
chr1	24308832	24308833	chr1:24308833:T:G	rs139584306	T	G	T	Sox2_MA0143.3	22	0	+	0	0	.
chr1	24329510	24329511	chr1:24329511:T:G	rs12059221	T	G	T	Sox2_MA0143.3	6	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr1	24419124	24419125	chr1:24419125:G:A	rs1016209	G	A	A	Sox2_MA0143.3	-9	0	-	0	0	.
chr1	24428428	24428429	chr1:24428429:A:C	rs6681281	A	C	A	Sox2_MA0143.3	25	0	+	0	0	.
chr1	24449476	24449477	chr1:24449477:G:A	rs4648989	G	A	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr1	24459943	24459944	chr1:24459944:C:G	rs6424097	C	G	G	Sox2_MA0143.3	-16	0	-	0	0	.
chr1	24462459	24462460	chr1:24462460:G:A	rs6688953	G	A	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr1	24577969	24577970	chr1:24577970:T:G	rs77532731	T	G	T	Sox2_MA0143.3	25	0	-	0	0	.
chr1	24587480	24587481	chr1:24587481:C:A	rs12137127	C	A	C	Sox2_MA0143.3	16	0	-	0	0	.
chr1	24597877	24597878	chr1:24597878:T:C	rs77966424	T	C	T	Sox2_MA0143.3	3	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr1	24689146	24689147	chr1:24689147:C:T	rs7511698	C	T	T	Sox2_MA0143.3	19	0	+	0	0	.
chr1	24830924	24830925	chr1:24830925:G:A	rs76904895	G	A	G	Sox2_MA0143.3	5	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr1	24896842	24896843	chr1:24896843:G:T	rs114784707	G	T	G	Sox2_MA0143.3	12	0	-	0	0	.
chr1	24962783	24962784	chr1:24962784:T:C	rs66880507	T	C	C	Sox2_MA0143.3	4	1	+	8.864090315184848	1.9553355358696274	CCTTTGTG
chr1	24981888	24981889	chr1:24981889:G:C	rs77339362	G	C	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr1	24990736	24990737	chr1:24990737:C:G	rs311433	C	G	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr1	25132459	25132460	chr1:25132460:A:G	rs803307	A	G	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr1	25175123	25175124	chr1:25175124:A:C	rs1006633399	A	C	A	Sox2_MA0143.3	16	0	-	0	0	.
chr1	25194598	25194599	chr1:25194599:C:T	rs12736858	C	T	C	Sox2_MA0143.3	25	0	-	0	0	.
chr1	25211036	25211037	chr1:25211037:G:A	rs868291044	G	A	A	Sox2_MA0143.3	-2	0	-	0	0	.
chr1	25369343	25369344	chr1:25369344:G:A	rs1293259	G	A	-	Sox2_MA0143.3	-10	0	-	0	0	.
chr1	25519777	25519778	chr1:25519778:C:T	rs187780906	C	T	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr1	25671376	25671377	chr1:25671377:T:C	rs11802540	T	C	C	Sox2_MA0143.3	11	0	+	0	0	.
chr1	25675788	25675789	chr1:25675789:T:C	rs151079129	T	C	T	Sox2_MA0143.3	6	1	+	8.676919043985553	1.7681642646703326	CCATTGTG
chr1	25703926	25703927	chr1:25703927:T:C	rs2255298	T	C	C	Sox2_MA0143.3	12	0	-	0	0	.
chr1	25756054	25756055	chr1:25756055:A:G	rs807260	A	G	A	Sox2_MA0143.3	-6	0	-	0	0	.
chr1	25861746	25861747	chr1:25861747:G:A	rs213638	G	A	G	Sox2_MA0143.3	22	0	+	0	0	.
chr1	25888620	25888621	chr1:25888621:A:C	rs76974781	A	C	A	Sox2_MA0143.3	24	0	-	0	0	.
chr1	25888621	25888622	chr1:25888622:G:C	rs76717683	G	C	G	Sox2_MA0143.3	23	0	-	0	0	.
chr1	25888916	25888917	chr1:25888917:C:T	rs78580957	C	T	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr1	25909270	25909271	chr1:25909271:G:A	rs115399315	G	A	G	Sox2_MA0143.3	-5	0	+	0	0	.
chr1	25909424	25909425	chr1:25909425:T:C	rs807055	T	C	C	Sox2_MA0143.3	8	0	+	0	0	.
chr1	26011166	26011167	chr1:26011167:A:G	rs35610657	A	G	a	Sox2_MA0143.3	14	0	-	0	0	.
chr1	26017418	26017419	chr1:26017419:G:C	rs2154369	G	C	G	Sox2_MA0143.3	22	0	-	0	0	.
chr1	26328076	26328077	chr1:26328077:C:T	rs4659430	C	T	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr1	26392623	26392624	chr1:26392624:T:C	rs11247946	T	C	T	Sox2_MA0143.3	20	0	-	0	0	.
chr1	26459666	26459667	chr1:26459667:T:C	rs371016080	T	C	T	Sox2_MA0143.3	-18	0	-	0	0	.
chr1	26545635	26545636	chr1:26545636:A:G	chr1:26545636:A:G	A	G	a	Sox2_MA0143.3	-6	0	+	0	0	.
chr1	26545647	26545648	chr1:26545648:T:C	rs954029144	T	C	T	Sox2_MA0143.3	6	1	+	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr1	26695611	26695612	chr1:26695612:C:T	rs1026609870	C	T	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr1	26695636	26695637	chr1:26695637:G:A	rs1006627399	G	A	G	Sox2_MA0143.3	15	0	+	0	0	.
chr1	26695637	26695638	chr1:26695638:G:A	rs1018009523	G	A	G	Sox2_MA0143.3	16	0	+	0	0	.
chr1	26697669	26697670	chr1:26697670:C:T	rs546340693	C	T	C	Sox2_MA0143.3	7	1	+	9.019595766176417	9.613475778572903	CCATTGTC
chr1	26697717	26697718	chr1:26697718:C:T	rs372291113	C	T	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr1	26701807	26701808	chr1:26701808:A:G	rs12744003	A	G	G	Sox2_MA0143.3	14	0	+	0	0	.
chr1	26723424	26723425	chr1:26723425:G:A	rs186961649	G	A	G	Sox2_MA0143.3	11	0	+	0	0	.
chr1	26856492	26856493	chr1:26856493:T:G	rs10902646	T	G	G	Sox2_MA0143.3	26	0	+	0	0	.
chr1	26949588	26949589	chr1:26949589:A:G	rs555201897	A	G	A	Sox2_MA0143.3	24	0	+	0	0	.
chr1	27087825	27087826	chr1:27087826:G:A	rs114789648	G	A	G	Sox2_MA0143.3	13	0	-	0	0	.
chr1	27087828	27087829	chr1:27087829:A:T	rs55732343	A	T	A	Sox2_MA0143.3	10	0	-	0	0	.
chr1	27299529	27299530	chr1:27299530:G:A	chr1:27299530:G:A	G	A	G	Sox2_MA0143.3	10	0	-	0	0	.
chr1	27299552	27299553	chr1:27299553:G:C	chr1:27299553:G:C	G	C	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr1	27418612	27418613	chr1:27418613:C:T	rs1005414	C	T	C	Sox2_MA0143.3	20	0	-	0	0	.
chr1	27427545	27427546	chr1:27427546:C:T	rs2236034	C	T	C	Sox2_MA0143.3	13	0	+	0	0	.
chr1	27444742	27444743	chr1:27444743:G:A	rs78755444	G	A	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr1	27471707	27471708	chr1:27471708:G:A	rs9438572	G	A	A	Sox2_MA0143.3	12	0	-	0	0	.
chr1	27483057	27483058	chr1:27483058:G:T	rs9438576	G	T	T	Sox2_MA0143.3	-15	0	-	0	0	.
chr1	27505361	27505362	chr1:27505362:C:T	rs992854916	C	T	C	Sox2_MA0143.3	16	0	-	0	0	.
chr1	27528687	27528688	chr1:27528688:T:C	rs141703733	T	C	T	Sox2_MA0143.3	-4	0	+	0	0	.
chr1	27538897	27538898	chr1:27538898:G:A	rs78119238	G	A	G	Sox2_MA0143.3	0	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr1	27560871	27560872	chr1:27560872:T:C	rs80237006	T	C	T	Sox2_MA0143.3	-10	0	+	0	0	.
chr1	27637446	27637447	chr1:27637447:G:A	rs921325226	G	A	G	Sox2_MA0143.3	22	0	-	0	0	.
chr1	27671240	27671241	chr1:27671241:G:T	rs61443010	G	T	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr1	27881997	27881998	chr1:27881998:C:T	chr1:27881998:C:T	C	T	C	Sox2_MA0143.3	18	0	+	0	0	.
chr1	27887253	27887254	chr1:27887254:A:G	rs17162861	A	G	A	Sox2_MA0143.3	13	0	+	0	0	.
chr1	27928637	27928638	chr1:27928638:T:C	rs6671762	T	C	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr1	27937490	27937491	chr1:27937491:A:G	rs17185073	A	G	G	Sox2_MA0143.3	10	0	-	0	0	.
chr1	27937569	27937570	chr1:27937570:C:T	rs7524082	C	T	T	Sox2_MA0143.3	0	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr1	28079263	28079264	chr1:28079264:G:A	rs11247750	G	A	N	Sox2_MA0143.3	-10	0	+	0	0	.
chr1	28087851	28087852	chr1:28087852:G:C	rs142662460	G	C	g	Sox2_MA0143.3	-6	0	+	0	0	.
chr1	28087872	28087873	chr1:28087873:A:T	rs187670034	A	T	a	Sox2_MA0143.3	15	0	+	0	0	.
chr1	28087873	28087874	chr1:28087874:A:C	rs12143629	A	C	a	Sox2_MA0143.3	16	0	+	0	0	.
chr1	28090996	28090997	chr1:28090997:T:C	rs149866190	T	C	t	Sox2_MA0143.3	9	0	+	0	0	.
chr1	28131063	28131064	chr1:28131064:C:G	rs75541128	C	G	c	Sox2_MA0143.3	-14	0	+	0	0	.
chr1	28193721	28193722	chr1:28193722:C:G	rs905907	C	G	C	Sox2_MA0143.3	22	0	-	0	0	.
chr1	28232833	28232834	chr1:28232834:A:G	rs571874240	A	G	A	Sox2_MA0143.3	-17	0	+	0	0	.
chr1	28311373	28311374	chr1:28311374:G:A	rs479266	G	A	g	Sox2_MA0143.3	-14	0	+	0	0	.
chr1	28370120	28370121	chr1:28370121:C:A	rs535541527	C	A	C	Sox2_MA0143.3	0	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr1	28400099	28400100	chr1:28400100:C:T	rs11247803	C	T	C	Sox2_MA0143.3	5	1	-	8.676919043985553	1.7681642646703324	CCATTGTG
chr1	28510005	28510006	chr1:28510006:G:A	rs72661791	G	A	G	Sox2_MA0143.3	13	0	-	0	0	.
chr1	28512281	28512282	chr1:28512282:G:A	rs80345285	G	A	G	Sox2_MA0143.3	12	0	-	0	0	.
chr1	28773481	28773482	chr1:28773482:C:G	rs116209730	C	G	C	Sox2_MA0143.3	10	0	+	0	0	.
chr1	28835096	28835097	chr1:28835097:T:C	rs2236857	T	C	T	Sox2_MA0143.3	21	0	-	0	0	.
chr1	28927050	28927051	chr1:28927051:T:C	rs203283	T	C	T	Sox2_MA0143.3	13	0	+	0	0	.
chr1	28943681	28943682	chr1:28943682:C:T	rs111989996	C	T	C	Sox2_MA0143.3	25	0	-	0	0	.
chr1	29058079	29058080	chr1:29058080:T:C	rs2788891	T	C	C	Sox2_MA0143.3	13	0	+	0	0	.
chr1	29134753	29134754	chr1:29134754:C:T	rs492313	C	T	C	Sox2_MA0143.3	17	0	+	0	0	.
chr1	29192208	29192209	chr1:29192209:T:G	rs3222	T	G	T	Sox2_MA0143.3	13	0	+	0	0	.
chr1	29215248	29215249	chr1:29215249:C:T	rs12033768	C	T	C	Sox2_MA0143.3	27	0	+	0	0	.
chr1	29233100	29233101	chr1:29233101:C:T	rs2503009	C	T	T	Sox2_MA0143.3	13	0	+	0	0	.
chr1	29292265	29292266	chr1:29292266:G:A	rs2073173	G	A	A	Sox2_MA0143.3	11	0	+	0	0	.
chr1	29298862	29298863	chr1:29298863:G:A	rs9426315	G	A	A	Sox2_MA0143.3	0	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr1	29313304	29313305	chr1:29313305:C:T	rs10737387	C	T	C	Sox2_MA0143.3	22	0	+	0	0	.
chr1	29346484	29346485	chr1:29346485:A:G	rs10753333	A	G	A	Sox2_MA0143.3	6	1	-	8.676919043985553	1.7681642646703326	CCATTGTG
chr1	29352261	29352262	chr1:29352262:C:A	rs761430	C	A	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr1	29359235	29359236	chr1:29359236:A:G	rs10082166	A	G	G	Sox2_MA0143.3	12	0	-	0	0	.
chr1	29359244	29359245	chr1:29359245:A:C	rs77743876	A	C	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr1	29359277	29359278	chr1:29359278:T:G	rs6426356	T	G	G	Sox2_MA0143.3	3	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr1	29359299	29359300	chr1:29359300:C:G	rs569528043	C	G	C	Sox2_MA0143.3	25	0	+	0	0	.
chr1	29390418	29390419	chr1:29390419:G:A	rs4654335	G	A	g	Sox2_MA0143.3	23	0	+	0	0	.
chr1	29543402	29543403	chr1:29543403:G:A	rs6605085	G	A	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr1	29547083	29547084	chr1:29547084:C:T	rs553390507	C	T	c	Sox2_MA0143.3	-7	0	-	0	0	.
chr1	29556413	29556414	chr1:29556414:T:C	rs28567981	T	C	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr1	29594169	29594170	chr1:29594170:A:C	rs10915035	A	C	A	Sox2_MA0143.3	-15	0	+	0	0	.
chr1	29613814	29613815	chr1:29613815:G:A	rs10798895	G	A	G	Sox2_MA0143.3	8	0	-	0	0	.
chr1	29630138	29630139	chr1:29630139:A:G	rs271315	A	G	A	Sox2_MA0143.3	-3	0	-	0	0	.
chr1	29639901	29639902	chr1:29639902:A:C	rs144943189	A	C	A	Sox2_MA0143.3	-11	0	+	0	0	.
chr1	29682829	29682830	chr1:29682830:C:T	rs9286958	C	T	.	Sox2_MA0143.3	12	0	-	0	0	.
chr1	29689213	29689214	chr1:29689214:C:T	rs114697087	C	T	.	Sox2_MA0143.3	-12	0	+	0	0	.
chr1	29689220	29689221	chr1:29689221:G:A	rs74067633	G	A	.	Sox2_MA0143.3	-5	0	+	0	0	.
chr1	29714005	29714006	chr1:29714006:T:C	rs74734376	T	C	T	Sox2_MA0143.3	10	0	+	0	0	.
chr1	29751589	29751590	chr1:29751590:C:T	rs79654530	C	T	.	Sox2_MA0143.3	13	0	-	0	0	.
chr1	29766814	29766815	chr1:29766815:C:T	rs111601295	C	T	.	Sox2_MA0143.3	21	0	-	0	0	.
chr1	29848720	29848721	chr1:29848721:C:A	rs34527566	C	A	C	Sox2_MA0143.3	5	1	-	9.613475778572903	2.7047209992576837	CCATTGTT
chr1	29875426	29875427	chr1:29875427:T:C	rs6669732	T	C	t	Sox2_MA0143.3	8	0	-	0	0	.
chr1	29875570	29875571	chr1:29875571:C:G	rs60145710	C	G	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr1	29882181	29882182	chr1:29882182:C:G	rs34795728	C	G	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr1	29882188	29882189	chr1:29882189:G:A	rs34679869	G	A	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr1	29926336	29926337	chr1:29926337:A:C	rs12069994	A	C	A	Sox2_MA0143.3	-18	0	+	0	0	.
chr1	29926358	29926359	chr1:29926359:T:A	rs12071249	T	A	T	Sox2_MA0143.3	4	1	+	9.800647049772198	2.8918922704569785	CCTTTGTT
chr1	29974635	29974636	chr1:29974636:A:G	rs140471212	A	G	A	Sox2_MA0143.3	-18	0	+	0	0	.
chr1	29996636	29996637	chr1:29996637:A:G	rs267693	A	G	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr1	30004140	30004141	chr1:30004141:G:T	rs533712797	G	T	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr1	30108345	30108346	chr1:30108346:G:A	rs4245642	G	A	G	Sox2_MA0143.3	22	0	+	0	0	.
chr1	30263601	30263602	chr1:30263602:T:C	rs1033405	T	C	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr1	30265306	30265307	chr1:30265307:G:C	rs113901670	G	C	G	Sox2_MA0143.3	1	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr1	30284696	30284697	chr1:30284697:T:C	rs459013	T	C	T	Sox2_MA0143.3	-13	0	-	0	0	.
chr1	30306111	30306112	chr1:30306112:T:A	rs12096507	T	A	A	Sox2_MA0143.3	-16	0	+	0	0	.
chr1	30316359	30316360	chr1:30316360:G:A	rs117312	G	A	A	Sox2_MA0143.3	17	0	-	0	0	.
chr1	30325171	30325172	chr1:30325172:T:C	rs7549879	T	C	.	Sox2_MA0143.3	2	1	-	8.676919043985553	2.5582713367092715	CCATTGTG
chr1	30346900	30346901	chr1:30346901:T:C	rs10157851	T	C	.	Sox2_MA0143.3	2	1	+	9.800647049772198	3.494828071296623	CCTTTGTT
chr1	30371779	30371780	chr1:30371780:C:A	rs670781	C	A	.	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr1	30373216	30373217	chr1:30373217:T:C	rs78521984	T	C	.	Sox2_MA0143.3	26	0	+	0	0	.
chr1	30399237	30399238	chr1:30399238:G:C	rs138269512	G	C	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr1	30409188	30409189	chr1:30409189:A:G	rs12071101	A	G	a	Sox2_MA0143.3	17	0	+	0	0	.
chr1	30449674	30449675	chr1:30449675:G:A	rs610834	G	A	A	Sox2_MA0143.3	26	0	+	0	0	.
chr1	30465609	30465610	chr1:30465610:G:A	rs10915122	G	A	G	Sox2_MA0143.3	12	0	+	0	0	.
chr1	30513028	30513029	chr1:30513029:C:T	rs72650548	C	T	C	Sox2_MA0143.3	16	0	-	0	0	.
chr1	30513061	30513062	chr1:30513062:C:T	rs149739055	C	T	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr1	30514396	30514397	chr1:30514397:T:C	rs12727605	T	C	T	Sox2_MA0143.3	16	0	+	0	0	.
chr1	30527055	30527056	chr1:30527056:C:A	rs74528265	C	A	C	Sox2_MA0143.3	-20	0	-	0	0	.
chr1	30585454	30585455	chr1:30585455:A:T	rs520272	A	T	T	Sox2_MA0143.3	4	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr1	30585973	30585974	chr1:30585974:A:T	rs1039184	A	T	A	Sox2_MA0143.3	-12	0	+	0	0	.
chr1	30604287	30604288	chr1:30604288:T:C	rs558737	T	C	C	Sox2_MA0143.3	18	0	+	0	0	.
chr1	30637547	30637548	chr1:30637548:G:T	rs2093789	G	T	G	Sox2_MA0143.3	18	0	+	0	0	.
chr1	30686030	30686031	chr1:30686031:C:G	rs1188460	C	G	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr1	30701056	30701057	chr1:30701057:A:G	rs74063359	A	G	A	Sox2_MA0143.3	6	1	-	8.676919043985553	1.7681642646703326	CCATTGTG
chr1	30701074	30701075	chr1:30701075:C:T	rs1055150908	C	T	C	Sox2_MA0143.3	-12	0	-	0	0	.
chr1	30705503	30705504	chr1:30705504:A:G	rs1149034	A	G	A	Sox2_MA0143.3	22	0	-	0	0	.
chr1	30705541	30705542	chr1:30705542:G:A	rs184352189	G	A	G	Sox2_MA0143.3	-16	0	-	0	0	.
chr1	30707913	30707914	chr1:30707914:C:T	rs912217	C	T	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr1	30727859	30727860	chr1:30727860:C:G	rs72876484	C	G	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr1	30727884	30727885	chr1:30727885:T:C	rs182791743	T	C	t	Sox2_MA0143.3	16	0	+	0	0	.
chr1	30753385	30753386	chr1:30753386:C:G	rs191901576	C	G	c	Sox2_MA0143.3	10	0	-	0	0	.
chr1	30757159	30757160	chr1:30757160:G:C	rs2377488	G	C	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr1	30757162	30757163	chr1:30757163:C:T	rs12744988	C	T	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr1	30772427	30772428	chr1:30772428:G:A	rs4949296	G	A	G	Sox2_MA0143.3	21	0	-	0	0	.
chr1	30910549	30910550	chr1:30910550:G:A	rs57063046	G	A	G	Sox2_MA0143.3	8	0	-	0	0	.
chr1	30987663	30987664	chr1:30987664:G:C	rs111490269	G	C	G	Sox2_MA0143.3	9	0	-	0	0	.
chr1	31154803	31154804	chr1:31154804:G:C	rs1003590494	G	C	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr1	31215873	31215874	chr1:31215874:G:C	rs7520439	G	C	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr1	31437202	31437203	chr1:31437203:G:A	rs72880159	G	A	g	Sox2_MA0143.3	26	0	+	0	0	.
chr1	31476957	31476958	chr1:31476958:A:G	rs10914412	A	G	A	Sox2_MA0143.3	-18	0	+	0	0	.
chr1	31489562	31489563	chr1:31489563:T:C	rs72880196	T	C	T	Sox2_MA0143.3	-5	0	+	0	0	.
chr1	31575763	31575764	chr1:31575764:T:C	chr1:31575764:T:C	T	C	T	Sox2_MA0143.3	25	0	+	0	0	.
chr1	31717363	31717364	chr1:31717364:T:C	rs111536288	T	C	T	Sox2_MA0143.3	-8	0	-	0	0	.
chr1	31731655	31731656	chr1:31731656:G:A	rs3766823	G	A	A	Sox2_MA0143.3	-17	0	-	0	0	.
chr1	31734114	31734115	chr1:31734115:G:A	rs559830885	G	A	G	Sox2_MA0143.3	15	0	-	0	0	.
chr1	31755637	31755638	chr1:31755638:C:G	rs112063721	C	G	G	Sox2_MA0143.3	11	0	+	0	0	.
chr1	31822824	31822825	chr1:31822825:A:G	rs11807742	A	G	A	Sox2_MA0143.3	8	0	-	0	0	.
chr1	31944030	31944031	chr1:31944031:C:T	chr1:31944031:C:T	C	T	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr1	32191139	32191140	chr1:32191140:C:T	rs115624823	C	T	C	Sox2_MA0143.3	12	0	+	0	0	.
chr1	32250039	32250040	chr1:32250040:G:T	rs10914539	G	T	G	Sox2_MA0143.3	5	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr1	32335683	32335684	chr1:32335684:C:T	rs141916791	C	T	c	Sox2_MA0143.3	18	0	+	0	0	.
chr1	32713150	32713151	chr1:32713151:C:T	rs72709950	C	T	C	Sox2_MA0143.3	17	0	+	0	0	.
chr1	32757658	32757659	chr1:32757659:T:C	rs567784836	T	C	T	Sox2_MA0143.3	2	1	+	9.206767037375712	2.900948058900136	CCTTTGTC
chr1	32898493	32898494	chr1:32898494:C:T	rs942242	C	T	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr1	32915959	32915960	chr1:32915960:T:C	rs523283	T	C	T	Sox2_MA0143.3	-7	0	-	0	0	.
chr1	32989585	32989586	chr1:32989586:A:G	rs116877251	A	G	A	Sox2_MA0143.3	24	0	-	0	0	.
chr1	33050302	33050303	chr1:33050303:G:C	rs76353376	G	C	G	Sox2_MA0143.3	16	0	-	0	0	.
chr1	33127091	33127092	chr1:33127092:G:A	chr1:33127092:G:A	G	A	G	Sox2_MA0143.3	11	0	+	0	0	.
chr1	33161591	33161592	chr1:33161592:G:A	rs72885927	G	A	G	Sox2_MA0143.3	0	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr1	33169529	33169530	chr1:33169530:C:T	rs139178186	C	T	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr1	33255977	33255978	chr1:33255978:C:G	rs377701180	C	G	C	Sox2_MA0143.3	20	0	-	0	0	.
chr1	33256112	33256113	chr1:33256113:T:C	rs1056699297	T	C	T	Sox2_MA0143.3	3	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr1	33295671	33295672	chr1:33295672:G:A	rs529911398	G	A	G	Sox2_MA0143.3	21	0	+	0	0	.
chr1	33338423	33338424	chr1:33338424:T:C	rs537336139	T	C	T	Sox2_MA0143.3	16	0	-	0	0	.
chr1	33358645	33358646	chr1:33358646:A:G	rs139344571	A	G	A	Sox2_MA0143.3	-15	0	+	0	0	.
chr1	33382805	33382806	chr1:33382806:C:T	rs939910009	C	T	C	Sox2_MA0143.3	1	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr1	33441253	33441254	chr1:33441254:C:A	rs12032426	C	A	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr1	33441254	33441255	chr1:33441255:C:G	rs11582008	C	G	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr1	33461444	33461445	chr1:33461445:A:G	rs10914730	A	G	A	Sox2_MA0143.3	3	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr1	33568546	33568547	chr1:33568547:G:A	rs12057591	G	A	G	Sox2_MA0143.3	17	0	+	0	0	.
chr1	33608327	33608328	chr1:33608328:C:T	rs10914753	C	T	T	Sox2_MA0143.3	1	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr1	33627273	33627274	chr1:33627274:T:C	rs72662040	T	C	C	Sox2_MA0143.3	20	0	-	0	0	.
chr1	33764137	33764138	chr1:33764138:A:G	rs502743	A	G	a	Sox2_MA0143.3	-15	0	-	0	0	.
chr1	33771301	33771302	chr1:33771302:C:T	rs568101199	C	T	C	Sox2_MA0143.3	17	0	+	0	0	.
chr1	33814823	33814824	chr1:33814824:G:T	rs12047802	G	T	T	Sox2_MA0143.3	-13	0	+	0	0	.
chr1	33814845	33814846	chr1:33814846:T:C	rs764288555	T	C	T	Sox2_MA0143.3	9	0	+	0	0	.
chr1	33867665	33867666	chr1:33867666:T:G	rs1108927	T	G	T	Sox2_MA0143.3	-3	0	+	0	0	.
chr1	33896943	33896944	chr1:33896944:A:C	rs6660246	A	C	A	Sox2_MA0143.3	2	1	+	8.676919043985553	2.5582713367092715	CCATTGTG
chr1	33896944	33896945	chr1:33896945:T:C	rs6662850	T	C	C	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr1	33931341	33931342	chr1:33931342:T:A	rs10489915	T	A	T	Sox2_MA0143.3	6	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr1	34012882	34012883	chr1:34012883:G:T	rs4653367	G	T	G	Sox2_MA0143.3	20	0	-	0	0	.
chr1	34074745	34074746	chr1:34074746:G:A	rs1351747	G	A	A	Sox2_MA0143.3	20	0	-	0	0	.
chr1	34074748	34074749	chr1:34074749:T:C	rs1351746	T	C	C	Sox2_MA0143.3	17	0	-	0	0	.
chr1	34167081	34167082	chr1:34167082:C:T	rs897749261	C	T	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr1	34178235	34178236	chr1:34178236:A:G	rs750572	A	G	A	Sox2_MA0143.3	-5	0	+	0	0	.
chr1	34187436	34187437	chr1:34187437:A:G	rs6689801	A	G	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr1	34187444	34187445	chr1:34187445:C:A	rs6677382	C	A	C	Sox2_MA0143.3	1	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr1	34214147	34214148	chr1:34214148:A:G	rs4652999	A	G	G	Sox2_MA0143.3	3	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr1	34231886	34231887	chr1:34231887:A:G	rs1414472	A	G	A	Sox2_MA0143.3	-17	0	+	0	0	.
chr1	34236332	34236333	chr1:34236333:C:T	rs115619808	C	T	C	Sox2_MA0143.3	0	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr1	34238800	34238801	chr1:34238801:T:G	rs115455288	T	G	T	Sox2_MA0143.3	4	1	+	9.206767037375712	2.2980122580604916	CCTTTGTC
chr1	34261243	34261244	chr1:34261244:G:T	rs771402	G	T	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr1	34291094	34291095	chr1:34291095:C:G	rs6689625	C	G	G	Sox2_MA0143.3	23	0	-	0	0	.
chr1	34396176	34396177	chr1:34396177:C:G	rs6687677	C	G	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr1	34403849	34403850	chr1:34403850:G:T	rs12040266	G	T	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr1	34638659	34638660	chr1:34638660:A:C	rs11580029	A	C	C	Sox2_MA0143.3	11	0	+	0	0	.
chr1	34638673	34638674	chr1:34638674:C:T	rs11585727	C	T	C	Sox2_MA0143.3	25	0	+	0	0	.
chr1	34692105	34692106	chr1:34692106:T:C	rs76893325	T	C	T	Sox2_MA0143.3	2	1	-	9.613475778572903	3.494828071296623	CCATTGTT
chr1	34718431	34718432	chr1:34718432:C:T	rs693582	C	T	C	Sox2_MA0143.3	13	0	-	0	0	.
chr1	34779839	34779840	chr1:34779840:C:T	rs79252643	C	T	T	Sox2_MA0143.3	-2	0	+	0	0	.
chr1	34788480	34788481	chr1:34788481:C:T	rs76181055	C	T	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr1	34790523	34790524	chr1:34790524:A:G	rs1741969	A	G	G	Sox2_MA0143.3	10	0	-	0	0	.
chr1	34796369	34796370	chr1:34796370:C:G	rs604608	C	G	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr1	34805004	34805005	chr1:34805005:A:G	rs72657905	A	G	A	Sox2_MA0143.3	3	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr1	34829718	34829719	chr1:34829719:A:G	rs479289	A	G	A	Sox2_MA0143.3	-8	0	+	0	0	.
chr1	34842989	34842990	chr1:34842990:A:G	rs11577735	A	G	A	Sox2_MA0143.3	20	0	+	0	0	.
chr1	34843116	34843117	chr1:34843117:C:G	rs559732897	C	G	C	Sox2_MA0143.3	14	0	-	0	0	.
chr1	34875992	34875993	chr1:34875993:C:T	rs576816869	C	T	C	Sox2_MA0143.3	21	0	+	0	0	.
chr1	35193139	35193140	chr1:35193140:A:C	rs117402486	A	C	A	Sox2_MA0143.3	-15	0	+	0	0	.
chr1	35229133	35229134	chr1:35229134:C:T	rs144765239	C	T	C	Sox2_MA0143.3	8	0	+	0	0	.
chr1	35238612	35238613	chr1:35238613:A:C	rs78043886	A	C	a	Sox2_MA0143.3	-1	0	-	0	0	.
chr1	35279539	35279540	chr1:35279540:C:T	rs2458890	C	T	T	Sox2_MA0143.3	-5	0	+	0	0	.
chr1	35296109	35296110	chr1:35296110:A:G	rs376941799	A	G	A	Sox2_MA0143.3	17	0	-	0	0	.
chr1	35449570	35449571	chr1:35449571:G:A	rs1025087670	G	A	G	Sox2_MA0143.3	10	0	-	0	0	.
chr1	35559401	35559402	chr1:35559402:G:T	rs115012530	G	T	G	Sox2_MA0143.3	17	0	+	0	0	.
chr1	35566340	35566341	chr1:35566341:C:T	rs79080032	C	T	C	Sox2_MA0143.3	9	0	+	0	0	.
chr1	35883115	35883116	chr1:35883116:C:T	rs550044258	C	T	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr1	35883136	35883137	chr1:35883137:C:T	chr1:35883137:C:T	C	T	C	Sox2_MA0143.3	1	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr1	35931731	35931732	chr1:35931732:T:C	rs77115528	T	C	T	Sox2_MA0143.3	-12	0	+	0	0	.
chr1	36120475	36120476	chr1:36120476:A:C	rs6677708	A	C	a	Sox2_MA0143.3	6	1	-	8.676919043985553	1.7681642646703326	CCATTGTG
chr1	36123350	36123351	chr1:36123351:C:G	rs11263858	C	G	C	Sox2_MA0143.3	24	0	+	0	0	.
chr1	36155164	36155165	chr1:36155165:G:A	rs116915500	G	A	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr1	36161102	36161103	chr1:36161103:C:T	rs770065820	C	T	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr1	36161940	36161941	chr1:36161941:C:T	rs4653164	C	T	c	Sox2_MA0143.3	-2	0	+	0	0	.
chr1	36203941	36203942	chr1:36203942:C:T	rs6675154	C	T	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr1	36203944	36203945	chr1:36203945:C:G	rs76513965	C	G	-	Sox2_MA0143.3	0	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr1	36305459	36305460	chr1:36305460:G:A	rs115174238	G	A	A	Sox2_MA0143.3	-10	0	-	0	0	.
chr1	36353189	36353190	chr1:36353190:T:C	rs6701311	T	C	C	Sox2_MA0143.3	14	0	+	0	0	.
chr1	36444675	36444676	chr1:36444676:C:T	rs953517	C	T	T	Sox2_MA0143.3	-4	0	-	0	0	.
chr1	36474141	36474142	chr1:36474142:C:T	rs3917965	C	T	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr1	36497335	36497336	chr1:36497336:A:G	rs61149349	A	G	G	Sox2_MA0143.3	12	0	-	0	0	.
chr1	36497349	36497350	chr1:36497350:T:A	rs59123055	T	A	c	Sox2_MA0143.3	-2	0	-	0	0	.
chr1	36516481	36516482	chr1:36516482:T:C	rs181917123	T	C	T	Sox2_MA0143.3	19	0	-	0	0	.
chr1	36541568	36541569	chr1:36541569:A:G	rs189294677	A	G	A	Sox2_MA0143.3	15	0	+	0	0	.
chr1	36585818	36585819	chr1:36585819:T:C	rs750829	T	C	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr1	36655077	36655078	chr1:36655078:G:A	rs12754617	G	A	G	Sox2_MA0143.3	-14	0	+	0	0	.
chr1	36675456	36675457	chr1:36675457:C:T	rs6673797	C	T	C	Sox2_MA0143.3	25	0	-	0	0	.
chr1	36842083	36842084	chr1:36842084:G:A	rs72668174	G	A	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr1	36842084	36842085	chr1:36842085:A:C	rs72668175	A	C	A	Sox2_MA0143.3	-16	0	-	0	0	.
chr1	36881024	36881025	chr1:36881025:C:G	rs113340768	C	G	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr1	36956721	36956722	chr1:36956722:A:G	rs77213621	A	G	A	Sox2_MA0143.3	-2	0	-	0	0	.
chr1	37059427	37059428	chr1:37059428:T:C	rs7542671	T	C	T	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr1	37064274	37064275	chr1:37064275:C:A	rs140444682	C	A	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr1	37068880	37068881	chr1:37068881:C:T	rs79798877	C	T	C	Sox2_MA0143.3	21	0	+	0	0	.
chr1	37112552	37112553	chr1:37112553:G:T	rs6426010	G	T	G	Sox2_MA0143.3	1	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr1	37235079	37235080	chr1:37235080:A:G	rs10908325	A	G	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr1	37235282	37235283	chr1:37235283:A:C	rs144719478	A	C	A	Sox2_MA0143.3	12	0	-	0	0	.
chr1	37235308	37235309	chr1:37235309:G:A	rs56187752	G	A	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr1	37304130	37304131	chr1:37304131:C:T	rs75254055	C	T	C	Sox2_MA0143.3	16	0	-	0	0	.
chr1	37434698	37434699	chr1:37434699:C:T	rs72918996	C	T	C	Sox2_MA0143.3	1	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr1	37452492	37452493	chr1:37452493:C:T	rs12034306	C	T	c	Sox2_MA0143.3	-6	0	-	0	0	.
chr1	37466150	37466151	chr1:37466151:T:C	rs2245873	T	C	T	Sox2_MA0143.3	23	0	+	0	0	.
chr1	37488811	37488812	chr1:37488812:G:A	rs12087957	G	A	G	Sox2_MA0143.3	8	0	-	0	0	.
chr1	37502172	37502173	chr1:37502173:C:A	rs215864	C	A	A	Sox2_MA0143.3	-4	0	-	0	0	.
chr1	37517273	37517274	chr1:37517274:C:T	rs4652957	C	T	T	Sox2_MA0143.3	16	0	-	0	0	.
chr1	37522140	37522141	chr1:37522141:T:C	rs4653297	T	C	T	Sox2_MA0143.3	19	0	+	0	0	.
chr1	37612957	37612958	chr1:37612958:A:T	rs55852308	A	T	A	Sox2_MA0143.3	-1	0	-	0	0	.
chr1	37664012	37664013	chr1:37664013:C:T	rs4653315	C	T	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr1	37741924	37741925	chr1:37741925:G:A	rs72917904	G	A	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr1	37763382	37763383	chr1:37763383:T:C	rs591321	T	C	T	Sox2_MA0143.3	-8	0	+	0	0	.
chr1	37795485	37795486	chr1:37795486:G:A	rs534595062	G	A	G	Sox2_MA0143.3	23	0	+	0	0	.
chr1	37943301	37943302	chr1:37943302:T:C	rs28391281	T	C	T	Sox2_MA0143.3	10	0	-	0	0	.
chr1	38016042	38016043	chr1:38016043:G:A	rs74067363	G	A	G	Sox2_MA0143.3	26	0	+	0	0	.
chr1	38051250	38051251	chr1:38051251:C:T	rs117819301	C	T	C	Sox2_MA0143.3	26	0	-	0	0	.
chr1	38074288	38074289	chr1:38074289:T:C	rs560654	T	C	C	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr1	38091484	38091485	chr1:38091485:G:C	rs55924883	G	C	G	Sox2_MA0143.3	20	0	-	0	0	.
chr1	38153870	38153871	chr1:38153871:A:G	rs748955	A	G	A	Sox2_MA0143.3	18	0	+	0	0	.
chr1	38179651	38179652	chr1:38179652:C:A	rs149697902	C	A	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr1	38194201	38194202	chr1:38194202:T:G	rs7546178	T	G	G	Sox2_MA0143.3	4	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr1	38197486	38197487	chr1:38197487:C:A	rs34085231	C	A	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr1	38302426	38302427	chr1:38302427:C:T	rs1620189	C	T	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr1	38427313	38427314	chr1:38427314:T:C	rs10890230	T	C	c	Sox2_MA0143.3	-1	0	-	0	0	.
chr1	38444469	38444470	chr1:38444470:G:C	rs114365352	G	C	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr1	38449578	38449579	chr1:38449579:G:A	rs1006812	G	A	G	Sox2_MA0143.3	13	0	-	0	0	.
chr1	38476916	38476917	chr1:38476917:A:G	rs6600433	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr1	38571943	38571944	chr1:38571944:G:C	rs74064225	G	C	G	Sox2_MA0143.3	18	0	-	0	0	.
chr1	38608555	38608556	chr1:38608556:C:T	rs10789452	C	T	T	Sox2_MA0143.3	-4	0	+	0	0	.
chr1	38613373	38613374	chr1:38613374:A:G	rs3011197	A	G	G	Sox2_MA0143.3	6	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr1	38613374	38613375	chr1:38613375:C:G	rs3011198	C	G	G	Sox2_MA0143.3	5	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr1	38947563	38947564	chr1:38947564:T:C	rs11205448	T	C	C	Sox2_MA0143.3	27	0	+	0	0	.
chr1	38953242	38953243	chr1:38953243:T:G	rs80095751	T	G	T	Sox2_MA0143.3	-1	0	-	0	0	.
chr1	39001113	39001114	chr1:39001114:C:G	rs10888613	C	G	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr1	39105538	39105539	chr1:39105539:T:C	rs13374459	T	C	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr1	39105539	39105540	chr1:39105540:C:T	rs1009596469	C	T	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr1	39151299	39151300	chr1:39151300:G:A	rs80343439	G	A	C	Sox2_MA0143.3	20	0	+	0	0	.
chr1	39158707	39158708	chr1:39158708:C:T	rs11205698	C	T	C	Sox2_MA0143.3	20	0	-	0	0	.
chr1	39178416	39178417	chr1:39178417:A:G	rs779871186	A	G	A	Sox2_MA0143.3	-11	0	+	0	0	.
chr1	39395567	39395568	chr1:39395568:G:A	rs114119247	G	A	G	Sox2_MA0143.3	-12	0	+	0	0	.
chr1	39576034	39576035	chr1:39576035:C:G	chr1:39576035:C:G	C	G	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr1	39576036	39576037	chr1:39576037:G:A	chr1:39576037:G:A	G	A	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr1	39632602	39632603	chr1:39632603:T:C	rs376987120	T	C	T	Sox2_MA0143.3	-7	0	+	0	0	.
chr1	39819586	39819587	chr1:39819587:T:C	rs114822925	T	C	T	Sox2_MA0143.3	18	0	+	0	0	.
chr1	39845684	39845685	chr1:39845685:T:G	rs969006312	T	G	T	Sox2_MA0143.3	13	0	+	0	0	.
chr1	39926616	39926617	chr1:39926617:T:C	rs11584066	T	C	T	Sox2_MA0143.3	27	0	+	0	0	.
chr1	40143823	40143824	chr1:40143824:C:T	rs61780389	C	T	T	Sox2_MA0143.3	-1	0	-	0	0	.
chr1	40163069	40163070	chr1:40163070:G:C	rs147660558	G	C	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr1	40163079	40163080	chr1:40163080:T:C	rs7521146	T	C	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr1	40248337	40248338	chr1:40248338:G:A	rs12126903	G	A	G	Sox2_MA0143.3	-3	0	+	0	0	.
chr1	40304783	40304784	chr1:40304784:A:T	rs117563156	A	T	A	Sox2_MA0143.3	10	0	+	0	0	.
chr1	40312169	40312170	chr1:40312170:A:G	rs209918	A	G	G	Sox2_MA0143.3	4	1	-	8.864090315184848	1.9553355358696274	CCTTTGTG
chr1	40610893	40610894	chr1:40610894:G:A	rs12217146	G	A	G	Sox2_MA0143.3	23	0	-	0	0	.
chr1	40620121	40620122	chr1:40620122:G:C	rs12059241	G	C	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr1	40649667	40649668	chr1:40649668:C:T	rs140010169	C	T	C	Sox2_MA0143.3	9	0	-	0	0	.
chr1	40805649	40805650	chr1:40805650:C:T	rs4660466	C	T	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr1	40827296	40827297	chr1:40827297:C:T	rs11806175	C	T	C	Sox2_MA0143.3	5	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr1	40841247	40841248	chr1:40841248:C:T	rs72661523	C	T	C	Sox2_MA0143.3	5	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr1	40862320	40862321	chr1:40862321:G:C	rs369181872	G	C	G	Sox2_MA0143.3	11	0	-	0	0	.
chr1	40866515	40866516	chr1:40866516:A:G	rs77684312	A	G	A	Sox2_MA0143.3	-10	0	-	0	0	.
chr1	40893977	40893978	chr1:40893978:C:T	rs6695217	C	T	T	Sox2_MA0143.3	22	0	-	0	0	.
chr1	40914767	40914768	chr1:40914768:C:T	rs4233486	C	T	T	Sox2_MA0143.3	27	0	+	0	0	.
chr1	40917244	40917245	chr1:40917245:T:A	rs17357766	T	A	t	Sox2_MA0143.3	8	0	+	0	0	.
chr1	40919677	40919678	chr1:40919678:C:T	rs75853077	C	T	c	Sox2_MA0143.3	-1	0	+	0	0	.
chr1	40944829	40944830	chr1:40944830:A:G	rs4660493	A	G	A	Sox2_MA0143.3	-13	0	-	0	0	.
chr1	40958933	40958934	chr1:40958934:C:T	rs67325189	C	T	T	Sox2_MA0143.3	7	1	-	8.676919043985553	3.3675628303222993	CCATTGTG
chr1	40959351	40959352	chr1:40959352:T:C	rs7524587	T	C	T	Sox2_MA0143.3	27	0	+	0	0	.
chr1	41123363	41123364	chr1:41123364:T:C	rs148486610	T	C	T	Sox2_MA0143.3	-19	0	-	0	0	.
chr1	41167694	41167695	chr1:41167695:T:C	rs61781830	T	C	T	Sox2_MA0143.3	12	0	+	0	0	.
chr1	41167863	41167864	chr1:41167864:T:C	rs187784376	T	C	T	Sox2_MA0143.3	10	0	+	0	0	.
chr1	41291384	41291385	chr1:41291385:C:T	rs12035913	C	T	C	Sox2_MA0143.3	11	0	-	0	0	.
chr1	41298282	41298283	chr1:41298283:C:G	rs12037588	C	G	G	Sox2_MA0143.3	25	0	-	0	0	.
chr1	41343806	41343807	chr1:41343807:C:T	rs150749247	C	T	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr1	41354136	41354137	chr1:41354137:C:G	rs370166248	C	G	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr1	41360636	41360637	chr1:41360637:G:T	rs952550080	G	T	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr1	41411705	41411706	chr1:41411706:C:A	rs1018917553	C	A	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr1	41411743	41411744	chr1:41411744:T:C	rs2996011	T	C	C	Sox2_MA0143.3	24	0	+	0	0	.
chr1	41464082	41464083	chr1:41464083:G:A	rs141734187	G	A	G	Sox2_MA0143.3	10	0	+	0	0	.
chr1	41501523	41501524	chr1:41501524:A:C	rs61106622	A	C	A	Sox2_MA0143.3	-6	0	+	0	0	.
chr1	41509504	41509505	chr1:41509505:C:T	rs116529417	C	T	C	Sox2_MA0143.3	0	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr1	41514475	41514476	chr1:41514476:G:A	rs72669009	G	A	G	Sox2_MA0143.3	8	0	-	0	0	.
chr1	41538157	41538158	chr1:41538158:T:C	rs190806331	T	C	T	Sox2_MA0143.3	6	1	+	9.206767037375712	2.298012258060492	CCTTTGTC
chr1	41556249	41556250	chr1:41556250:C:T	rs2810561	C	T	C	Sox2_MA0143.3	9	0	-	0	0	.
chr1	41569971	41569972	chr1:41569972:C:A	rs7519954	C	A	c	Sox2_MA0143.3	19	0	-	0	0	.
chr1	41569999	41570000	chr1:41570000:A:G	rs187331034	A	G	A	Sox2_MA0143.3	-9	0	-	0	0	.
chr1	41656445	41656446	chr1:41656446:A:G	rs943376	A	G	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr1	41671769	41671770	chr1:41671770:C:T	rs61773710	C	T	C	Sox2_MA0143.3	5	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr1	41767536	41767537	chr1:41767537:C:T	rs7556202	C	T	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr1	41842339	41842340	chr1:41842340:A:G	rs607895	A	G	G	Sox2_MA0143.3	22	0	-	0	0	.
chr1	41914134	41914135	chr1:41914135:T:A	rs72965235	T	A	T	Sox2_MA0143.3	-12	0	+	0	0	.
chr1	41916240	41916241	chr1:41916241:T:C	rs144362222	T	C	T	Sox2_MA0143.3	2	1	-	8.676919043985553	2.5582713367092715	CCATTGTG
chr1	42335698	42335699	chr1:42335699:G:C	rs2247153	G	C	G	Sox2_MA0143.3	16	0	-	0	0	.
chr1	42399196	42399197	chr1:42399197:C:T	rs4660630	C	T	C	Sox2_MA0143.3	1	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr1	42524552	42524553	chr1:42524553:G:A	rs6702464	G	A	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr1	42674320	42674321	chr1:42674321:T:C	rs11576375	T	C	T	Sox2_MA0143.3	15	0	-	0	0	.
chr1	42674323	42674324	chr1:42674324:A:G	rs144706038	A	G	A	Sox2_MA0143.3	12	0	-	0	0	.
chr1	42707261	42707262	chr1:42707262:C:T	rs12410984	C	T	C	Sox2_MA0143.3	16	0	+	0	0	.
chr1	42707265	42707266	chr1:42707266:A:G	rs12407243	A	G	A	Sox2_MA0143.3	20	0	+	0	0	.
chr1	42935440	42935441	chr1:42935441:C:T	rs189482774	C	T	C	Sox2_MA0143.3	0	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr1	43006495	43006496	chr1:43006496:G:A	rs75595481	G	A	G	Sox2_MA0143.3	-16	0	-	0	0	.
chr1	43092963	43092964	chr1:43092964:G:A	rs1339706	G	A	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr1	43172513	43172514	chr1:43172514:A:G	rs1782383	A	G	A	Sox2_MA0143.3	-3	0	-	0	0	.
chr1	43209795	43209796	chr1:43209796:G:A	rs2453412	G	A	G	Sox2_MA0143.3	13	0	+	0	0	.
chr1	43302857	43302858	chr1:43302858:G:T	rs996278378	G	T	g	Sox2_MA0143.3	-9	0	-	0	0	.
chr1	43303810	43303811	chr1:43303811:G:T	rs76148363	G	T	G	Sox2_MA0143.3	5	1	+	9.019595766176417	2.110840986861197	CCATTGTC
chr1	43453245	43453246	chr1:43453246:T:G	rs560313634	T	G	T	Sox2_MA0143.3	7	1	-	3.5547341015215945	9.206767037375712	CCTTTGTA
chr1	43469936	43469937	chr1:43469937:A:C	rs72883850	A	C	A	Sox2_MA0143.3	17	0	-	0	0	.
chr1	43510795	43510796	chr1:43510796:A:G	rs10890252	A	G	G	Sox2_MA0143.3	27	0	+	0	0	.
chr1	43536612	43536613	chr1:43536613:C:T	rs79857290	C	T	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr1	43563681	43563682	chr1:43563682:C:G	rs11210871	C	G	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr1	43573360	43573361	chr1:43573361:C:T	rs74706712	C	T	C	Sox2_MA0143.3	7	1	+	9.206767037375712	9.800647049772198	CCTTTGTC
chr1	43573377	43573378	chr1:43573378:C:T	rs72889040	C	T	C	Sox2_MA0143.3	24	0	+	0	0	.
chr1	43586925	43586926	chr1:43586926:T:C	rs11210875	T	C	T	Sox2_MA0143.3	26	0	-	0	0	.
chr1	43624686	43624687	chr1:43624687:A:G	rs11210891	A	G	A	Sox2_MA0143.3	27	0	-	0	0	.
chr1	43637110	43637111	chr1:43637111:G:A	rs11210895	G	A	G	Sox2_MA0143.3	0	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr1	43666839	43666840	chr1:43666840:A:C	rs191578502	A	C	A	Sox2_MA0143.3	-18	0	+	0	0	.
chr1	43861679	43861680	chr1:43861680:G:T	rs3791089	G	T	G	Sox2_MA0143.3	7	1	+	8.864090315184848	9.800647049772198	CCTTTGTG
chr1	43895860	43895861	chr1:43895861:C:T	rs17533707	C	T	C	Sox2_MA0143.3	-12	0	-	0	0	.
chr1	43942781	43942782	chr1:43942782:T:C	rs2485989	T	C	T	Sox2_MA0143.3	-12	0	-	0	0	.
chr1	43948203	43948204	chr1:43948204:C:A	rs182067916	C	A	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr1	44553767	44553768	chr1:44553768:A:T	rs76472767	A	T	A	Sox2_MA0143.3	14	0	-	0	0	.
chr1	44608264	44608265	chr1:44608265:G:A	rs56061701	G	A	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr1	44650828	44650829	chr1:44650829:C:G	rs190585955	C	G	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr1	44653166	44653167	chr1:44653167:C:T	rs114948402	C	T	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr1	44677387	44677388	chr1:44677388:G:A	rs112641209	G	A	G	Sox2_MA0143.3	21	0	-	0	0	.
chr1	44771446	44771447	chr1:44771447:T:G	rs12136048	T	G	G	Sox2_MA0143.3	23	0	+	0	0	.
chr1	44831834	44831835	chr1:44831835:A:C	rs41269093	A	C	A	Sox2_MA0143.3	-4	0	+	0	0	.
chr1	44856032	44856033	chr1:44856033:C:T	rs185703101	C	T	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr1	44926267	44926268	chr1:44926268:C:A	rs263982	C	A	C	Sox2_MA0143.3	24	0	-	0	0	.
chr1	44970341	44970342	chr1:44970342:T:C	rs72676591	T	C	T	Sox2_MA0143.3	-3	0	+	0	0	.
chr1	44970371	44970372	chr1:44970372:C:T	rs411976	C	T	c	Sox2_MA0143.3	27	0	+	0	0	.
chr1	44990672	44990673	chr1:44990673:T:C	rs12750107	T	C	C	Sox2_MA0143.3	10	0	+	0	0	.
chr1	45010208	45010209	chr1:45010209:T:C	rs146960255	T	C	T	Sox2_MA0143.3	3	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr1	45010213	45010214	chr1:45010214:C:T	rs41269097	C	T	C	Sox2_MA0143.3	8	0	+	0	0	.
chr1	45012025	45012026	chr1:45012026:G:A	rs112059352	G	A	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr1	45207055	45207056	chr1:45207056:A:G	rs549970123	A	G	A	Sox2_MA0143.3	27	0	-	0	0	.
chr1	45297869	45297870	chr1:45297870:A:G	rs6688723	A	G	A	Sox2_MA0143.3	23	0	-	0	0	.
chr1	45326674	45326675	chr1:45326675:C:T	rs571489423	C	T	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr1	45326686	45326687	chr1:45326687:G:A	rs148499542	G	A	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr1	45413415	45413416	chr1:45413416:T:C	rs6657284	T	C	T	Sox2_MA0143.3	-7	0	-	0	0	.
chr1	45413416	45413417	chr1:45413417:C:T	rs6690821	C	T	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr1	45499093	45499094	chr1:45499094:T:C	rs12042481	T	C	T	Sox2_MA0143.3	14	0	+	0	0	.
chr1	45526627	45526628	chr1:45526628:C:G	rs7522705	C	G	C	Sox2_MA0143.3	10	0	+	0	0	.
chr1	45541329	45541330	chr1:45541330:T:C	rs644915	T	C	C	Sox2_MA0143.3	20	0	+	0	0	.
chr1	45584778	45584779	chr1:45584779:C:G	rs182833646	C	G	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr1	45584794	45584795	chr1:45584795:C:T	rs371542921	C	T	C	Sox2_MA0143.3	14	0	+	0	0	.
chr1	45852251	45852252	chr1:45852252:A:G	rs10890356	A	G	G	Sox2_MA0143.3	15	0	-	0	0	.
chr1	45914564	45914565	chr1:45914565:G:A	rs12564541	G	A	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr1	45924887	45924888	chr1:45924888:G:C	rs7526369	G	C	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr1	46205946	46205947	chr1:46205947:G:T	rs187990015	G	T	G	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr1	46343179	46343180	chr1:46343180:C:T	rs41293287	C	T	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr1	46343352	46343353	chr1:46343353:G:T	rs7525309	G	T	G	Sox2_MA0143.3	20	0	+	0	0	.
chr1	46480076	46480077	chr1:46480077:C:T	rs12404412	C	T	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr1	46503175	46503176	chr1:46503176:C:T	rs2025383	C	T	T	Sox2_MA0143.3	19	0	+	0	0	.
chr1	46520360	46520361	chr1:46520361:A:G	rs1267314	A	G	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr1	46525546	46525547	chr1:46525547:G:A	rs61783086	G	A	G	Sox2_MA0143.3	8	0	+	0	0	.
chr1	46558781	46558782	chr1:46558782:G:A	rs56195429	G	A	G	Sox2_MA0143.3	-2	0	+	0	0	.
chr1	46601600	46601601	chr1:46601601:C:T	rs4660357	C	T	T	Sox2_MA0143.3	-17	0	-	0	0	.
chr1	46608789	46608790	chr1:46608790:A:G	rs2181413	A	G	A	Sox2_MA0143.3	18	0	+	0	0	.
chr1	46617021	46617022	chr1:46617022:C:T	rs187845056	C	T	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr1	46724146	46724147	chr1:46724147:G:A	rs143119176	G	A	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr1	46742408	46742409	chr1:46742409:A:G	rs1971518	A	G	A	Sox2_MA0143.3	-1	0	-	0	0	.
chr1	46983392	46983393	chr1:46983393:A:C	rs11211414	A	C	A	Sox2_MA0143.3	10	0	+	0	0	.
chr1	47046870	47046871	chr1:47046871:T:C	rs79113880	T	C	T	Sox2_MA0143.3	6	1	+	8.676919043985553	1.7681642646703326	CCATTGTG
chr1	47213231	47213232	chr1:47213232:G:C	rs56791949	G	C	G	Sox2_MA0143.3	26	0	-	0	0	.
chr1	47217934	47217935	chr1:47217935:G:C	rs2070929	G	C	G	Sox2_MA0143.3	19	0	-	0	0	.
chr1	47403001	47403002	chr1:47403002:C:T	rs150430416	C	T	C	Sox2_MA0143.3	22	0	-	0	0	.
chr1	47533149	47533150	chr1:47533150:C:T	rs75450373	C	T	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr1	47615167	47615168	chr1:47615168:G:A	rs28391304	G	A	G	Sox2_MA0143.3	26	0	-	0	0	.
chr1	47697155	47697156	chr1:47697156:T:G	rs17103666	T	G	G	Sox2_MA0143.3	4	1	+	8.864090315184848	1.9553355358696274	CCTTTGTG
chr1	47724001	47724002	chr1:47724002:T:G	rs981839682	T	G	T	Sox2_MA0143.3	-6	0	+	0	0	.
chr1	47816847	47816848	chr1:47816848:A:G	rs3930825	A	G	A	Sox2_MA0143.3	15	0	-	0	0	.
chr1	47824662	47824663	chr1:47824663:C:T	rs145372215	C	T	C	Sox2_MA0143.3	17	0	+	0	0	.
chr1	47895110	47895111	chr1:47895111:A:G	rs75246120	A	G	A	Sox2_MA0143.3	27	0	-	0	0	.
chr1	47895153	47895154	chr1:47895154:G:A	rs1497098	G	A	G	Sox2_MA0143.3	-16	0	-	0	0	.
chr1	47896205	47896206	chr1:47896206:C:T	rs10890512	C	T	C	Sox2_MA0143.3	9	0	-	0	0	.
chr1	47906019	47906020	chr1:47906020:A:G	rs11211627	A	G	A	Sox2_MA0143.3	24	0	-	0	0	.
chr1	47906023	47906024	chr1:47906024:C:T	rs12722901	C	T	C	Sox2_MA0143.3	20	0	-	0	0	.
chr1	47918373	47918374	chr1:47918374:C:T	rs115654267	C	T	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr1	48019706	48019707	chr1:48019707:A:G	rs75078896	A	G	A	Sox2_MA0143.3	-16	0	-	0	0	.
chr1	48047537	48047538	chr1:48047538:G:A	rs1390973	G	A	G	Sox2_MA0143.3	25	0	-	0	0	.
chr1	48047569	48047570	chr1:48047570:G:A	rs823388	G	A	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr1	48079664	48079665	chr1:48079665:C:G	rs653364	C	G	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr1	48177384	48177385	chr1:48177385:G:C	rs74660634	G	C	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr1	48239104	48239105	chr1:48239105:A:C	rs570272887	A	C	A	Sox2_MA0143.3	-14	0	-	0	0	.
chr1	48472791	48472792	chr1:48472792:C:T	rs185850430	C	T	C	Sox2_MA0143.3	23	0	+	0	0	.
chr1	48572739	48572740	chr1:48572740:A:G	rs192389704	A	G	A	Sox2_MA0143.3	27	0	-	0	0	.
chr1	48643354	48643355	chr1:48643355:C:T	rs319946	C	T	C	Sox2_MA0143.3	0	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr1	48776397	48776398	chr1:48776398:G:C	rs1023941249	G	C	G	Sox2_MA0143.3	10	0	-	0	0	.
chr1	48776410	48776411	chr1:48776411:A:C	chr1:48776411:A:C	A	C	A	Sox2_MA0143.3	-3	0	-	0	0	.
chr1	48823543	48823544	chr1:48823544:A:G	rs11810411	A	G	A	Sox2_MA0143.3	20	0	+	0	0	.
chr1	48857002	48857003	chr1:48857003:A:C	rs10749681	A	C	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr1	50431596	50431597	chr1:50431597:G:A	rs76325451	G	A	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr1	50806605	50806606	chr1:50806606:T:C	rs72902777	T	C	T	Sox2_MA0143.3	-4	0	-	0	0	.
chr1	51227664	51227665	chr1:51227665:G:A	rs140842248	G	A	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr1	51280434	51280435	chr1:51280435:G:A	rs557979204	G	A	G	Sox2_MA0143.3	17	0	-	0	0	.
chr1	51303413	51303414	chr1:51303414:C:T	rs377216059	C	T	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr1	51331436	51331437	chr1:51331437:G:A	rs1030506563	G	A	G	Sox2_MA0143.3	26	0	-	0	0	.
chr1	51586693	51586694	chr1:51586694:C:T	rs140384591	C	T	C	Sox2_MA0143.3	12	0	-	0	0	.
chr1	51966139	51966140	chr1:51966140:T:G	rs10888744	T	G	T	Sox2_MA0143.3	-2	0	-	0	0	.
chr1	52400393	52400394	chr1:52400394:A:G	rs7556402	A	G	A	Sox2_MA0143.3	-18	0	-	0	0	.
chr1	52577543	52577544	chr1:52577544:T:C	rs2452762	T	C	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr1	52590514	52590515	chr1:52590515:G:A	rs12138419	G	A	G	Sox2_MA0143.3	18	0	-	0	0	.
chr1	52603083	52603084	chr1:52603084:C:T	rs565763850	C	T	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr1	52708455	52708456	chr1:52708456:G:A	rs76293690	G	A	G	Sox2_MA0143.3	1	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr1	52744490	52744491	chr1:52744491:A:C	rs4926928	A	C	c	Sox2_MA0143.3	-1	0	+	0	0	.
chr1	52750982	52750983	chr1:52750983:C:T	rs925830967	C	T	c	Sox2_MA0143.3	16	0	+	0	0	.
chr1	52859966	52859967	chr1:52859967:T:C	rs2607095	T	C	T	Sox2_MA0143.3	4	1	+	8.676919043985553	1.7681642646703322	CCATTGTG
chr1	53130056	53130057	chr1:53130057:C:T	rs3766808	C	T	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr1	53237893	53237894	chr1:53237894:T:C	rs112586961	T	C	T	Sox2_MA0143.3	25	0	+	0	0	.
chr1	53288626	53288627	chr1:53288627:T:C	rs74086830	T	C	T	Sox2_MA0143.3	-18	0	+	0	0	.
chr1	53288648	53288649	chr1:53288649:T:C	rs114746729	T	C	T	Sox2_MA0143.3	4	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr1	53310943	53310944	chr1:53310944:C:T	rs1288480	C	T	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr1	53329946	53329947	chr1:53329947:A:G	rs72897416	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr1	53365046	53365047	chr1:53365047:G:A	rs36178505	G	A	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr1	53384691	53384692	chr1:53384692:C:T	rs78122858	C	T	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr1	53390604	53390605	chr1:53390605:A:G	rs1288585	A	G	G	Sox2_MA0143.3	11	0	-	0	0	.
chr1	53398413	53398414	chr1:53398414:C:T	rs12758724	C	T	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr1	53453817	53453818	chr1:53453818:C:T	rs55899711	C	T	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr1	53502016	53502017	chr1:53502017:G:A	rs72906945	G	A	A	Sox2_MA0143.3	25	0	-	0	0	.
chr1	53509313	53509314	chr1:53509314:G:T	rs10749691	G	T	G	Sox2_MA0143.3	10	0	-	0	0	.
chr1	53543605	53543606	chr1:53543606:C:G	rs496933	C	G	G	Sox2_MA0143.3	9	0	-	0	0	.
chr1	53558220	53558221	chr1:53558221:C:T	rs7545676	C	T	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr1	53558539	53558540	chr1:53558540:T:C	rs116333673	T	C	T	Sox2_MA0143.3	25	0	+	0	0	.
chr1	53732014	53732015	chr1:53732015:A:G	rs702489	A	G	A	Sox2_MA0143.3	6	1	-	8.676919043985553	1.7681642646703326	CCATTGTG
chr1	53767837	53767838	chr1:53767838:T:C	rs71637818	T	C	T	Sox2_MA0143.3	26	0	-	0	0	.
chr1	53767868	53767869	chr1:53767869:A:G	rs41311158	A	G	A	Sox2_MA0143.3	-5	0	-	0	0	.
chr1	53968510	53968511	chr1:53968511:G:T	rs7535941	G	T	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr1	53982571	53982572	chr1:53982572:G:A	rs78340900	G	A	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr1	54013684	54013685	chr1:54013685:A:C	rs72664119	A	C	A	Sox2_MA0143.3	11	0	+	0	0	.
chr1	54049001	54049002	chr1:54049002:T:C	rs141252843	T	C	T	Sox2_MA0143.3	22	0	-	0	0	.
chr1	54121447	54121448	chr1:54121448:T:C	rs17109806	T	C	T	Sox2_MA0143.3	2	1	-	9.613475778572903	3.494828071296623	CCATTGTT
chr1	54321182	54321183	chr1:54321183:T:C	rs12026238	T	C	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr1	54355085	54355086	chr1:54355086:A:G	chr1:54355086:A:G	A	G	A	Sox2_MA0143.3	4	1	-	8.676919043985553	1.7681642646703322	CCATTGTG
chr1	54378838	54378839	chr1:54378839:A:G	rs74071702	A	G	A	Sox2_MA0143.3	-9	0	-	0	0	.
chr1	54405755	54405756	chr1:54405756:C:G	rs377728656	C	G	C	Sox2_MA0143.3	19	0	-	0	0	.
chr1	54405759	54405760	chr1:54405760:C:G	rs537981740	C	G	C	Sox2_MA0143.3	15	0	-	0	0	.
chr1	54407433	54407434	chr1:54407434:T:C	rs1268932291	T	C	T	Sox2_MA0143.3	21	0	+	0	0	.
chr1	54407435	54407436	chr1:54407436:C:T	rs7527646	C	T	C	Sox2_MA0143.3	23	0	+	0	0	.
chr1	54448615	54448616	chr1:54448616:A:G	rs4268303	A	G	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr1	54448642	54448643	chr1:54448643:G:A	rs11206359	G	A	G	Sox2_MA0143.3	14	0	+	0	0	.
chr1	54448647	54448648	chr1:54448648:C:T	rs11206360	C	T	C	Sox2_MA0143.3	19	0	+	0	0	.
chr1	54543171	54543172	chr1:54543172:G:A	rs72668249	G	A	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr1	54543195	54543196	chr1:54543196:C:T	rs930841636	C	T	C	Sox2_MA0143.3	14	0	+	0	0	.
chr1	54575740	54575741	chr1:54575741:T:C	rs555009	T	C	c	Sox2_MA0143.3	-16	0	-	0	0	.
chr1	54648795	54648796	chr1:54648796:G:C	rs2082607	G	C	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr1	54713065	54713066	chr1:54713066:G:C	rs74605127	G	C	C	Sox2_MA0143.3	8	0	-	0	0	.
chr1	54713087	54713088	chr1:54713088:C:A	rs72907972	C	A	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr1	54719399	54719400	chr1:54719400:T:C	rs72909804	T	C	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr1	54833795	54833796	chr1:54833796:C:T	rs1180850	C	T	C	Sox2_MA0143.3	1	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr1	54833819	54833820	chr1:54833820:T:C	rs6688753	T	C	T	Sox2_MA0143.3	25	0	+	0	0	.
chr1	54836010	54836011	chr1:54836011:T:G	rs12725171	T	G	T	Sox2_MA0143.3	10	0	+	0	0	.
chr1	54850267	54850268	chr1:54850268:G:T	rs11555500	G	T	G	Sox2_MA0143.3	0	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr1	54856616	54856617	chr1:54856617:G:C	rs74953488	G	C	G	Sox2_MA0143.3	1	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr1	54880032	54880033	chr1:54880033:C:A	rs12042996	C	A	C	Sox2_MA0143.3	9	0	-	0	0	.
chr1	54911266	54911267	chr1:54911267:G:A	rs666668	G	A	g	Sox2_MA0143.3	-6	0	-	0	0	.
chr1	54940176	54940177	chr1:54940177:G:T	rs11206476	G	T	G	Sox2_MA0143.3	0	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr1	54967626	54967627	chr1:54967627:T:C	rs7536667	T	C	C	Sox2_MA0143.3	24	0	-	0	0	.
chr1	54969257	54969258	chr1:54969258:G:T	rs57428252	G	T	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr1	55002903	55002904	chr1:55002904:T:G	rs111364282	T	G	T	Sox2_MA0143.3	-8	0	-	0	0	.
chr1	55069403	55069404	chr1:55069404:T:C	rs143614448	T	C	T	Sox2_MA0143.3	-7	0	+	0	0	.
chr1	55250823	55250824	chr1:55250824:G:A	rs2647286	G	A	A	Sox2_MA0143.3	24	0	+	0	0	.
chr1	55304891	55304892	chr1:55304892:C:T	rs1948635	C	T	T	Sox2_MA0143.3	15	0	+	0	0	.
chr1	55464307	55464308	chr1:55464308:C:T	rs12088645	C	T	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr1	55476322	55476323	chr1:55476323:A:G	rs1740127	A	G	G	Sox2_MA0143.3	23	0	-	0	0	.
chr1	55503742	55503743	chr1:55503743:G:T	rs11206612	G	T	g	Sox2_MA0143.3	-20	0	-	0	0	.
chr1	55503827	55503828	chr1:55503828:C:T	rs1740123	C	T	C	Sox2_MA0143.3	-12	0	-	0	0	.
chr1	55506585	55506586	chr1:55506586:C:T	rs356118	C	T	C	Sox2_MA0143.3	27	0	+	0	0	.
chr1	55573395	55573396	chr1:55573396:G:T	rs12086546	G	T	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr1	55592817	55592818	chr1:55592818:T:C	rs11206626	T	C	T	Sox2_MA0143.3	-9	0	+	0	0	.
chr1	55618612	55618613	chr1:55618613:T:G	rs61566671	T	G	T	Sox2_MA0143.3	24	0	+	0	0	.
chr1	55623759	55623760	chr1:55623760:T:C	rs115220141	T	C	T	Sox2_MA0143.3	10	0	+	0	0	.
chr1	55673666	55673667	chr1:55673667:T:C	rs577838045	T	C	T	Sox2_MA0143.3	-13	0	-	0	0	.
chr1	55724638	55724639	chr1:55724639:G:T	rs147145219	G	T	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr1	55813978	55813979	chr1:55813979:T:C	rs11583637	T	C	T	Sox2_MA0143.3	18	0	+	0	0	.
chr1	55857902	55857903	chr1:55857903:C:G	rs3924189	C	G	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr1	55859786	55859787	chr1:55859787:T:G	rs4294458	T	G	G	Sox2_MA0143.3	20	0	-	0	0	.
chr1	55887621	55887622	chr1:55887622:C:G	rs10789010	C	G	C	Sox2_MA0143.3	18	0	-	0	0	.
chr1	55931688	55931689	chr1:55931689:A:T	rs4468206	A	T	A	Sox2_MA0143.3	-19	0	+	0	0	.
chr1	55947586	55947587	chr1:55947587:T:C	rs6662998	T	C	T	Sox2_MA0143.3	6	1	+	8.676919043985553	1.7681642646703326	CCATTGTG
chr1	55948784	55948785	chr1:55948785:G:A	rs75906140	G	A	G	Sox2_MA0143.3	1	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr1	55997980	55997981	chr1:55997981:T:C	rs7532703	T	C	T	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr1	56234931	56234932	chr1:56234932:T:C	rs2793691	T	C	T	Sox2_MA0143.3	20	0	+	0	0	.
chr1	56250082	56250083	chr1:56250083:G:T	rs2792797	G	T	T	Sox2_MA0143.3	15	0	+	0	0	.
chr1	56303780	56303781	chr1:56303781:C:T	rs2793690	C	T	C	Sox2_MA0143.3	23	0	+	0	0	.
chr1	56304700	56304701	chr1:56304701:C:A	rs11206781	C	A	C	Sox2_MA0143.3	23	0	-	0	0	.
chr1	56356970	56356971	chr1:56356971:G:A	rs11809768	G	A	G	Sox2_MA0143.3	14	0	+	0	0	.
chr1	56411900	56411901	chr1:56411901:G:T	rs780512916	G	T	G	Sox2_MA0143.3	22	0	+	0	0	.
chr1	56439772	56439773	chr1:56439773:T:A	rs6421495	T	A	A	Sox2_MA0143.3	-2	0	+	0	0	.
chr1	56439785	56439786	chr1:56439786:G:A	rs76249454	G	A	G	Sox2_MA0143.3	11	0	+	0	0	.
chr1	56497070	56497071	chr1:56497071:C:T	rs370274222	C	T	C	Sox2_MA0143.3	5	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr1	56506927	56506928	chr1:56506928:T:G	rs77922669	T	G	T	Sox2_MA0143.3	27	0	+	0	0	.
chr1	56525621	56525622	chr1:56525622:C:T	rs6674131	C	T	C	Sox2_MA0143.3	0	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr1	56626043	56626044	chr1:56626044:G:A	rs1539382	G	A	A	Sox2_MA0143.3	14	0	-	0	0	.
chr1	56780156	56780157	chr1:56780157:T:A	rs1738408	T	A	A	Sox2_MA0143.3	3	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr1	56800039	56800040	chr1:56800040:C:A	rs147482671	C	A	C	Sox2_MA0143.3	18	0	-	0	0	.
chr1	56817159	56817160	chr1:56817160:T:C	rs147141919	T	C	C	Sox2_MA0143.3	15	0	-	0	0	.
chr1	56825012	56825013	chr1:56825013:C:T	rs17114419	C	T	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr1	56910610	56910611	chr1:56910611:C:T	rs1774902	C	T	C	Sox2_MA0143.3	19	0	-	0	0	.
chr1	56912524	56912525	chr1:56912525:T:C	rs1754533	T	C	C	Sox2_MA0143.3	14	0	-	0	0	.
chr1	56934714	56934715	chr1:56934715:T:G	rs148095478	T	G	T	Sox2_MA0143.3	6	1	+	9.019595766176417	2.110840986861197	CCATTGTC
chr1	56953552	56953553	chr1:56953553:C:A	rs649069	C	A	C	Sox2_MA0143.3	-20	0	-	0	0	.
chr1	57024659	57024660	chr1:57024660:T:C	rs706361	T	C	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr1	57333224	57333225	chr1:57333225:C:G	rs76514148	C	G	C	Sox2_MA0143.3	0	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr1	57360800	57360801	chr1:57360801:T:C	rs41324751	T	C	.	Sox2_MA0143.3	17	0	+	0	0	.
chr1	57831675	57831676	chr1:57831676:T:G	rs852784	T	G	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr1	57942751	57942752	chr1:57942752:A:G	rs11588451	A	G	A	Sox2_MA0143.3	-7	0	-	0	0	.
chr1	58038735	58038736	chr1:58038736:G:T	rs10493236	G	T	T	Sox2_MA0143.3	14	0	-	0	0	.
chr1	58045801	58045802	chr1:58045802:T:A	rs4087335	T	A	T	Sox2_MA0143.3	7	1	+	9.800647049772198	3.5547341015215945	CCTTTGTT
chr1	58065581	58065582	chr1:58065582:A:G	rs7527995	A	G	A	Sox2_MA0143.3	4	1	-	3.5547341015215945	-3.3540206777936254	CCTTTGTA
chr1	58196580	58196581	chr1:58196581:C:T	rs502534	C	T	T	Sox2_MA0143.3	-8	0	-	0	0	.
chr1	58397171	58397172	chr1:58397172:C:T	rs338923	C	T	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr1	58453417	58453418	chr1:58453418:A:G	rs706454	A	G	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr1	58574414	58574415	chr1:58574415:G:A	rs232843	G	A	G	Sox2_MA0143.3	18	0	+	0	0	.
chr1	58591232	58591233	chr1:58591233:A:G	rs232819	A	G	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr1	58621659	58621660	chr1:58621660:C:T	rs74860828	C	T	C	Sox2_MA0143.3	10	0	+	0	0	.
chr1	58659646	58659647	chr1:58659647:C:T	rs12562490	C	T	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr1	58780013	58780014	chr1:58780014:G:A	rs4647023	G	A	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr1	58780016	58780017	chr1:58780017:G:A	chr1:58780017:G:A	G	A	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr1	58780021	58780022	chr1:58780022:C:A	rs1003817577	C	A	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr1	58786381	58786382	chr1:58786382:C:G	rs2104259	C	G	C	Sox2_MA0143.3	19	0	+	0	0	.
chr1	58815050	58815051	chr1:58815051:A:T	rs12097718	A	T	A	Sox2_MA0143.3	23	0	+	0	0	.
chr1	58818290	58818291	chr1:58818291:C:T	rs1045490633	C	T	C	Sox2_MA0143.3	14	0	-	0	0	.
chr1	58883897	58883898	chr1:58883898:C:T	rs12239208	C	T	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr1	59004821	59004822	chr1:59004822:C:A	rs10158505	C	A	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr1	59017647	59017648	chr1:59017648:A:C	rs12030196	A	C	A	Sox2_MA0143.3	4	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr1	59123311	59123312	chr1:59123312:C:T	rs2985500	C	T	C	Sox2_MA0143.3	1	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr1	59317591	59317592	chr1:59317592:A:T	rs146598162	A	T	A	Sox2_MA0143.3	4	1	-	9.800647049772198	2.8918922704569785	CCTTTGTT
chr1	59331886	59331887	chr1:59331887:C:T	rs835380	C	T	T	Sox2_MA0143.3	22	0	-	0	0	.
chr1	59408409	59408410	chr1:59408410:T:C	rs585368	T	C	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr1	59433063	59433064	chr1:59433064:A:G	rs10889135	A	G	A	Sox2_MA0143.3	26	0	+	0	0	.
chr1	59521663	59521664	chr1:59521664:C:G	rs12096521	C	G	C	Sox2_MA0143.3	11	0	-	0	0	.
chr1	59893277	59893278	chr1:59893278:T:C	rs11572327	T	C	T	Sox2_MA0143.3	10	0	-	0	0	.
chr1	59909021	59909022	chr1:59909022:A:G	rs553774390	A	G	A	Sox2_MA0143.3	-18	0	+	0	0	.
chr1	59980101	59980102	chr1:59980102:T:G	rs2554300	T	G	A	Sox2_MA0143.3	-10	0	+	0	0	.
chr1	59986180	59986181	chr1:59986181:T:C	rs77613911	T	C	T	Sox2_MA0143.3	4	1	+	9.206767037375712	2.2980122580604916	CCTTTGTC
chr1	59986189	59986190	chr1:59986190:T:C	rs1415675	T	C	T	Sox2_MA0143.3	13	0	+	0	0	.
chr1	60068556	60068557	chr1:60068557:C:G	rs74085898	C	G	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr1	60068574	60068575	chr1:60068575:C:T	rs35842399	C	T	C	Sox2_MA0143.3	1	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr1	60118358	60118359	chr1:60118359:C:G	rs12122558	C	G	C	Sox2_MA0143.3	0	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr1	60268968	60268969	chr1:60268969:A:C	rs11207587	A	C	A	Sox2_MA0143.3	-19	0	+	0	0	.
chr1	60388505	60388506	chr1:60388506:A:G	rs111409243	A	G	A	Sox2_MA0143.3	17	0	+	0	0	.
chr1	60592221	60592222	chr1:60592222:T:C	rs1675596	T	C	C	Sox2_MA0143.3	-5	0	-	0	0	.
chr1	60656199	60656200	chr1:60656200:C:A	rs489543	C	A	C	Sox2_MA0143.3	26	0	+	0	0	.
chr1	60662879	60662880	chr1:60662880:G:A	chr1:60662880:G:A	G	A	G	Sox2_MA0143.3	21	0	-	0	0	.
chr1	60742701	60742702	chr1:60742702:A:T	rs1033174	A	T	T	Sox2_MA0143.3	-2	0	-	0	0	.
chr1	60764671	60764672	chr1:60764672:T:A	rs2166667	T	A	T	Sox2_MA0143.3	-20	0	+	0	0	.
chr1	60789405	60789406	chr1:60789406:T:G	rs748172529	T	G	T	Sox2_MA0143.3	25	0	-	0	0	.
chr1	60862151	60862152	chr1:60862152:C:T	rs7546977	C	T	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr1	60867967	60867968	chr1:60867968:G:T	chr1:60867968:G:T	G	T	G	Sox2_MA0143.3	24	0	-	0	0	.
chr1	60963701	60963702	chr1:60963702:G:A	rs1777538	G	A	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr1	61119288	61119289	chr1:61119289:C:T	rs867653387	C	T	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr1	61259865	61259866	chr1:61259866:G:C	rs332836	G	C	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr1	61320194	61320195	chr1:61320195:A:G	rs149713690	A	G	A	Sox2_MA0143.3	11	0	+	0	0	.
chr1	61398286	61398287	chr1:61398287:G:A	rs144852171	G	A	G	Sox2_MA0143.3	27	0	-	0	0	.
chr1	61453052	61453053	chr1:61453053:T:C	rs17265852	T	C	T	Sox2_MA0143.3	12	0	+	0	0	.
chr1	61502355	61502356	chr1:61502356:C:T	rs112642395	C	T	C	Sox2_MA0143.3	11	0	-	0	0	.
chr1	61542845	61542846	chr1:61542846:C:T	rs11207765	C	T	c	Sox2_MA0143.3	-12	0	+	0	0	.
chr1	61542876	61542877	chr1:61542877:C:T	rs12735544	C	T	C	Sox2_MA0143.3	19	0	+	0	0	.
chr1	61559546	61559547	chr1:61559547:G:A	rs12406226	G	A	G	Sox2_MA0143.3	1	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr1	61724786	61724787	chr1:61724787:T:C	rs1454941047	T	C	T	Sox2_MA0143.3	-15	0	-	0	0	.
chr1	61776393	61776394	chr1:61776394:A:C	rs1286837	A	C	A	Sox2_MA0143.3	6	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr1	62039168	62039169	chr1:62039169:T:C	rs17378995	T	C	T	Sox2_MA0143.3	10	0	+	0	0	.
chr1	62180889	62180890	chr1:62180890:A:G	rs568834085	A	G	A	Sox2_MA0143.3	-9	0	-	0	0	.
chr1	62198560	62198561	chr1:62198561:T:G	rs72921841	T	G	T	Sox2_MA0143.3	26	0	-	0	0	.
chr1	62434456	62434457	chr1:62434457:G:A	rs17123615	G	A	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr1	62760151	62760152	chr1:62760152:C:T	rs11208023	C	T	C	Sox2_MA0143.3	10	0	-	0	0	.
chr1	62926993	62926994	chr1:62926994:G:A	rs11208061	G	A	A	Sox2_MA0143.3	14	0	-	0	0	.
chr1	62945636	62945637	chr1:62945637:A:G	rs4915858	A	G	-	Sox2_MA0143.3	-20	0	-	0	0	.
chr1	63128755	63128756	chr1:63128756:C:T	rs17124674	C	T	T	Sox2_MA0143.3	-14	0	+	0	0	.
chr1	63200263	63200264	chr1:63200264:C:T	rs116550909	C	T	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr1	63322433	63322434	chr1:63322434:C:T	rs188042675	C	T	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr1	63463559	63463560	chr1:63463560:A:G	rs146632576	A	G	A	Sox2_MA0143.3	-14	0	-	0	0	.
chr1	63636987	63636988	chr1:63636988:T:C	chr1:63636988:T:C	T	C	T	Sox2_MA0143.3	-14	0	-	0	0	.
chr1	63647740	63647741	chr1:63647741:T:A	rs855329	T	A	A	Sox2_MA0143.3	21	0	+	0	0	.
chr1	63662988	63662989	chr1:63662989:A:G	rs184260422	A	G	A	Sox2_MA0143.3	-5	0	+	0	0	.
chr1	63662993	63662994	chr1:63662994:C:A	rs963437554	C	A	C	Sox2_MA0143.3	0	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr1	63663010	63663011	chr1:63663011:G:A	rs1217199898	G	A	G	Sox2_MA0143.3	17	0	+	0	0	.
chr1	63663015	63663016	chr1:63663016:G:A	rs2749094	G	A	G	Sox2_MA0143.3	22	0	+	0	0	.
chr1	63666037	63666038	chr1:63666038:G:C	rs11208266	G	C	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr1	63732633	63732634	chr1:63732634:T:G	rs11208280	T	G	t	Sox2_MA0143.3	-12	0	-	0	0	.
chr1	63814005	63814006	chr1:63814006:T:C	rs12076919	T	C	T	Sox2_MA0143.3	8	0	+	0	0	.
chr1	63824589	63824590	chr1:63824590:A:G	rs115285521	A	G	A	Sox2_MA0143.3	26	0	-	0	0	.
chr1	63824626	63824627	chr1:63824627:A:G	rs639222	A	G	A	Sox2_MA0143.3	-11	0	-	0	0	.
chr1	63852611	63852612	chr1:63852612:G:T	rs78847978	G	T	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr1	63888052	63888053	chr1:63888053:T:G	rs855847	T	G	T	Sox2_MA0143.3	17	0	+	0	0	.
chr1	63891376	63891377	chr1:63891377:T:C	rs855836	T	C	T	Sox2_MA0143.3	-8	0	+	0	0	.
chr1	63891388	63891389	chr1:63891389:T:C	rs855835	T	C	C	Sox2_MA0143.3	4	1	+	9.206767037375712	2.2980122580604916	CCTTTGTC
chr1	63955899	63955900	chr1:63955900:A:G	rs148414040	A	G	A	Sox2_MA0143.3	-3	0	+	0	0	.
chr1	64077602	64077603	chr1:64077603:G:A	rs61765386	G	A	A	Sox2_MA0143.3	22	0	-	0	0	.
chr1	64120639	64120640	chr1:64120640:T:C	rs2762850	T	C	T	Sox2_MA0143.3	22	0	-	0	0	.
chr1	64120659	64120660	chr1:64120660:T:C	rs12129247	T	C	C	Sox2_MA0143.3	2	1	-	9.613475778572903	3.494828071296623	CCATTGTT
chr1	64136973	64136974	chr1:64136974:C:T	rs146332914	C	T	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr1	64136976	64136977	chr1:64136977:C:T	rs17126220	C	T	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr1	64155686	64155687	chr1:64155687:C:G	rs6682140	C	G	C	Sox2_MA0143.3	26	0	+	0	0	.
chr1	64212430	64212431	chr1:64212431:C:T	rs114501912	C	T	C	Sox2_MA0143.3	0	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr1	64246617	64246618	chr1:64246618:T:C	rs72667263	T	C	T	Sox2_MA0143.3	-9	0	-	0	0	.
chr1	64279980	64279981	chr1:64279981:C:A	rs705554	C	A	A	Sox2_MA0143.3	-6	0	+	0	0	.
chr1	64292764	64292765	chr1:64292765:T:A	rs825215	T	A	A	Sox2_MA0143.3	-1	0	-	0	0	.
chr1	64296575	64296576	chr1:64296576:C:A	rs6683502	C	A	C	Sox2_MA0143.3	21	0	-	0	0	.
chr1	64505912	64505913	chr1:64505913:C:T	rs4600081	C	T	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr1	64664471	64664472	chr1:64664472:C:T	rs180708782	C	T	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr1	64754351	64754352	chr1:64754352:T:A	rs10493368	T	A	A	Sox2_MA0143.3	-8	0	+	0	0	.
chr1	64838786	64838787	chr1:64838787:A:C	rs11579616	A	C	A	Sox2_MA0143.3	-15	0	-	0	0	.
chr1	64843318	64843319	chr1:64843319:G:A	rs2780820	G	A	A	Sox2_MA0143.3	26	0	-	0	0	.
chr1	64852005	64852006	chr1:64852006:C:T	rs17127091	C	T	C	Sox2_MA0143.3	15	0	-	0	0	.
chr1	64957387	64957388	chr1:64957388:T:C	rs11208557	T	C	T	Sox2_MA0143.3	4	1	+	9.800647049772198	2.8918922704569785	CCTTTGTT
chr1	64960943	64960944	chr1:64960944:T:C	rs78587818	T	C	T	Sox2_MA0143.3	2	1	-	9.019595766176417	2.900948058900136	CCATTGTC
chr1	64998357	64998358	chr1:64998358:T:C	rs525680	T	C	T	Sox2_MA0143.3	6	1	+	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr1	65067650	65067651	chr1:65067651:A:C	rs561681545	A	C	a	Sox2_MA0143.3	17	0	+	0	0	.
chr1	65164823	65164824	chr1:65164824:C:T	rs149635099	C	T	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr1	65230169	65230170	chr1:65230170:A:G	rs1855982	A	G	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr1	65257034	65257035	chr1:65257035:G:A	rs12405704	G	A	G	Sox2_MA0143.3	-5	0	+	0	0	.
chr1	65282170	65282171	chr1:65282171:T:G	rs536084	T	G	G	Sox2_MA0143.3	3	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr1	65424552	65424553	chr1:65424553:C:T	rs36072366	C	T	T	Sox2_MA0143.3	21	0	+	0	0	.
chr1	65425499	65425500	chr1:65425500:T:A	rs9436298	T	A	A	Sox2_MA0143.3	-15	0	+	0	0	.
chr1	65436008	65436009	chr1:65436009:A:G	rs538706181	A	G	A	Sox2_MA0143.3	4	1	-	9.800647049772198	2.8918922704569785	CCTTTGTT
chr1	65558280	65558281	chr1:65558281:T:A	rs76695989	T	A	T	Sox2_MA0143.3	6	1	+	8.676919043985553	1.7681642646703326	CCATTGTG
chr1	65696685	65696686	chr1:65696686:C:T	rs61780863	C	T	C	Sox2_MA0143.3	20	0	-	0	0	.
chr1	65704329	65704330	chr1:65704330:C:T	rs17127924	C	T	T	Sox2_MA0143.3	19	0	-	0	0	.
chr1	65804384	65804385	chr1:65804385:C:T	rs10789202	C	T	T	Sox2_MA0143.3	-20	0	-	0	0	.
chr1	66181060	66181061	chr1:66181061:C:T	rs147257739	C	T	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr1	66181096	66181097	chr1:66181097:C:A	rs782329	C	A	A	Sox2_MA0143.3	16	0	+	0	0	.
chr1	66322436	66322437	chr1:66322437:C:T	rs4655606	C	T	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr1	66373049	66373050	chr1:66373050:A:C	rs783067	A	C	A	Sox2_MA0143.3	-7	0	+	0	0	.
chr1	66381082	66381083	chr1:66381083:A:C	rs783060	A	C	A	Sox2_MA0143.3	4	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr1	66462448	66462449	chr1:66462449:G:A	rs1067001	G	A	G	Sox2_MA0143.3	-3	0	-	0	0	.
chr1	66495480	66495481	chr1:66495481:T:A	rs2066007	T	A	T	Sox2_MA0143.3	-3	0	+	0	0	.
chr1	66504064	66504065	chr1:66504065:A:C	chr1:66504065:A:C	A	C	A	Sox2_MA0143.3	-4	0	+	0	0	.
chr1	66506007	66506008	chr1:66506008:C:T	rs6670805	C	T	T	Sox2_MA0143.3	7	1	+	9.206767037375712	9.800647049772198	CCTTTGTC
chr1	66532352	66532353	chr1:66532353:A:G	rs4142763	A	G	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr1	66544010	66544011	chr1:66544011:T:C	rs17129065	T	C	T	Sox2_MA0143.3	7	1	+	9.613475778572903	9.019595766176417	CCATTGTT
chr1	66544826	66544827	chr1:66544827:T:G	rs12144047	T	G	A	Sox2_MA0143.3	-3	0	-	0	0	.
chr1	66624666	66624667	chr1:66624667:T:C	rs17129217	T	C	T	Sox2_MA0143.3	-5	0	+	0	0	.
chr1	66644485	66644486	chr1:66644486:C:T	rs10889639	C	T	C	Sox2_MA0143.3	10	0	+	0	0	.
chr1	66665539	66665540	chr1:66665540:T:C	rs149020940	T	C	T	Sox2_MA0143.3	23	0	-	0	0	.
chr1	66728109	66728110	chr1:66728110:G:T	rs536527	G	T	T	Sox2_MA0143.3	25	0	+	0	0	.
chr1	66810139	66810140	chr1:66810140:T:C	rs150606098	T	C	C	Sox2_MA0143.3	16	0	-	0	0	.
chr1	67031537	67031538	chr1:67031538:C:T	rs2815363	C	T	C	Sox2_MA0143.3	26	0	-	0	0	.
chr1	67241471	67241472	chr1:67241472:T:C	rs72676092	T	C	T	Sox2_MA0143.3	-3	0	-	0	0	.
chr1	67308581	67308582	chr1:67308582:C:T	rs180935908	C	T	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr1	67308609	67308610	chr1:67308610:C:T	rs7544381	C	T	T	Sox2_MA0143.3	22	0	+	0	0	.
chr1	67393684	67393685	chr1:67393685:C:T	rs746151263	C	T	C	Sox2_MA0143.3	15	0	+	0	0	.
chr1	67462017	67462018	chr1:67462018:G:A	rs12136231	G	A	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr1	67462026	67462027	chr1:67462027:A:G	rs10458560	A	G	A	Sox2_MA0143.3	-7	0	+	0	0	.
chr1	67534748	67534749	chr1:67534749:T:C	rs188773860	T	C	T	Sox2_MA0143.3	20	0	+	0	0	.
chr1	67555818	67555819	chr1:67555819:C:T	rs6662607	C	T	T	Sox2_MA0143.3	-7	0	+	0	0	.
chr1	67585453	67585454	chr1:67585454:A:G	rs787540	A	G	A	Sox2_MA0143.3	3	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr1	67590251	67590252	chr1:67590252:C:T	rs80000159	C	T	C	Sox2_MA0143.3	26	0	-	0	0	.
chr1	67629028	67629029	chr1:67629029:A:C	rs787482	A	C	C	Sox2_MA0143.3	14	0	+	0	0	.
chr1	67635859	67635860	chr1:67635860:A:G	rs12132307	A	G	A	Sox2_MA0143.3	16	0	+	0	0	.
chr1	67646044	67646045	chr1:67646045:G:A	rs12565229	G	A	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr1	67679937	67679938	chr1:67679938:C:T	rs56315442	C	T	T	Sox2_MA0143.3	7	1	-	8.864090315184848	3.5547341015215945	CCTTTGTG
chr1	67679939	67679940	chr1:67679940:C:T	rs2055904	C	T	C	Sox2_MA0143.3	5	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr1	67685214	67685215	chr1:67685215:A:T	rs1397946	A	T	A	Sox2_MA0143.3	26	0	+	0	0	.
chr1	67686679	67686680	chr1:67686680:G:A	rs3783468	G	A	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr1	67686702	67686703	chr1:67686703:T:C	rs3783469	T	C	T	Sox2_MA0143.3	4	1	+	9.206767037375712	2.2980122580604916	CCTTTGTC
chr1	67686704	67686705	chr1:67686705:T:C	rs681673	T	C	C	Sox2_MA0143.3	6	1	+	9.206767037375712	2.298012258060492	CCTTTGTC
chr1	67765553	67765554	chr1:67765554:C:T	rs7530537	C	T	T	Sox2_MA0143.3	-9	0	-	0	0	.
chr1	67766393	67766394	chr1:67766394:T:C	rs574695349	T	C	T	Sox2_MA0143.3	-14	0	-	0	0	.
chr1	67826199	67826200	chr1:67826200:C:T	rs11209162	C	T	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr1	67837841	67837842	chr1:67837842:T:C	rs11209165	T	C	C	Sox2_MA0143.3	20	0	-	0	0	.
chr1	67850172	67850173	chr1:67850173:C:T	rs190532070	C	T	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr1	67850179	67850180	chr1:67850180:T:A	chr1:67850180:T:A	T	A	T	Sox2_MA0143.3	2	1	+	9.800647049772198	9.613475778572903	CCTTTGTT
chr1	67988250	67988251	chr1:67988251:C:T	rs7417949	C	T	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr1	68116967	68116968	chr1:68116968:C:T	chr1:68116968:C:T	C	T	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr1	68116987	68116988	chr1:68116988:C:T	rs2986216	C	T	C	Sox2_MA0143.3	1	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr1	68119530	68119531	chr1:68119531:A:T	rs17130486	A	T	A	Sox2_MA0143.3	2	1	-	3.5547341015215945	3.3675628303222993	CCTTTGTA
chr1	68215115	68215116	chr1:68215116:G:A	rs141251765	G	A	G	Sox2_MA0143.3	27	0	-	0	0	.
chr1	68230785	68230786	chr1:68230786:T:C	rs147248268	T	C	T	Sox2_MA0143.3	2	1	+	9.800647049772198	3.494828071296623	CCTTTGTT
chr1	68478949	68478950	chr1:68478950:A:T	rs12759438	A	T	A	Sox2_MA0143.3	20	0	+	0	0	.
chr1	68796213	68796214	chr1:68796214:G:A	rs78328618	G	A	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr1	68796214	68796215	chr1:68796215:C:T	rs78590434	C	T	C	Sox2_MA0143.3	-20	0	-	0	0	.
chr1	68950223	68950224	chr1:68950224:A:T	rs183844533	A	T	A	Sox2_MA0143.3	16	0	+	0	0	.
chr1	69199016	69199017	chr1:69199017:G:A	rs1763926	G	A	A	Sox2_MA0143.3	-1	0	+	0	0	.
chr1	69569375	69569376	chr1:69569376:A:C	chr1:69569376:A:C	A	C	A	Sox2_MA0143.3	27	0	+	0	0	.
chr1	69728564	69728565	chr1:69728565:A:G	rs56968328	A	G	G	Sox2_MA0143.3	23	0	+	0	0	.
chr1	69824435	69824436	chr1:69824436:T:C	rs12745809	T	C	T	Sox2_MA0143.3	9	0	-	0	0	.
chr1	69824560	69824561	chr1:69824561:G:A	rs67024201	G	A	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr1	70118776	70118777	chr1:70118777:G:A	rs593467	G	A	G	Sox2_MA0143.3	16	0	-	0	0	.
chr1	70353671	70353672	chr1:70353672:G:T	rs139441664	G	T	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr1	70897137	70897138	chr1:70897138:C:A	rs112308166	C	A	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr1	70971063	70971064	chr1:70971064:C:A	rs5697	C	A	c	Sox2_MA0143.3	7	1	+	9.206767037375712	3.5547341015215945	CCTTTGTC
chr1	71053386	71053387	chr1:71053387:G:A	rs7529930	G	A	A	Sox2_MA0143.3	0	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr1	71080772	71080773	chr1:71080773:T:C	rs560976907	T	C	T	Sox2_MA0143.3	-15	0	-	0	0	.
chr1	71358256	71358257	chr1:71358257:G:A	rs11209773	G	A	G	Sox2_MA0143.3	22	0	+	0	0	.
chr1	71530406	71530407	chr1:71530407:C:A	rs357237	C	A	C	Sox2_MA0143.3	25	0	+	0	0	.
chr1	71599866	71599867	chr1:71599867:A:G	rs79917123	A	G	A	Sox2_MA0143.3	-5	0	-	0	0	.
chr1	71737442	71737443	chr1:71737443:T:C	rs59851000	T	C	C	Sox2_MA0143.3	20	0	-	0	0	.
chr1	72182219	72182220	chr1:72182220:A:G	rs10789334	A	G	G	Sox2_MA0143.3	6	1	-	8.676919043985553	1.7681642646703326	CCATTGTG
chr1	72246845	72246846	chr1:72246846:A:C	rs1194284	A	C	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr1	72527074	72527075	chr1:72527075:C:G	rs1775369	C	G	C	Sox2_MA0143.3	26	0	-	0	0	.
chr1	72527077	72527078	chr1:72527078:T:C	rs1664387	T	C	T	Sox2_MA0143.3	23	0	-	0	0	.
chr1	72539812	72539813	chr1:72539813:C:T	rs76086113	C	T	C	Sox2_MA0143.3	1	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr1	73198925	73198926	chr1:73198926:T:C	rs11210180	T	C	C	Sox2_MA0143.3	4	1	+	8.864090315184848	1.9553355358696274	CCTTTGTG
chr1	73301380	73301381	chr1:73301381:C:G	rs11210202	C	G	c	Sox2_MA0143.3	13	0	-	0	0	.
chr1	73451563	73451564	chr1:73451564:G:T	rs628933	G	T	T	Sox2_MA0143.3	-9	0	-	0	0	.
chr1	73475778	73475779	chr1:73475779:A:G	rs548843452	A	G	A	Sox2_MA0143.3	12	0	-	0	0	.
chr1	73517982	73517983	chr1:73517983:T:C	rs17571689	T	C	C	Sox2_MA0143.3	24	0	+	0	0	.
chr1	73600478	73600479	chr1:73600479:T:C	rs4650214	T	C	T	Sox2_MA0143.3	2	1	-	8.676919043985553	2.5582713367092715	CCATTGTG
chr1	73621289	73621290	chr1:73621290:A:G	rs1411280	A	G	A	Sox2_MA0143.3	12	0	-	0	0	.
chr1	73665256	73665257	chr1:73665257:T:C	rs9803770	T	C	C	Sox2_MA0143.3	6	1	+	9.019595766176417	2.110840986861197	CCATTGTC
chr1	73781442	73781443	chr1:73781443:C:T	rs191847846	C	T	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr1	73781449	73781450	chr1:73781450:T:G	rs4650229	T	G	T	Sox2_MA0143.3	3	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr1	73781450	73781451	chr1:73781451:T:G	rs4650230	T	G	G	Sox2_MA0143.3	4	1	+	9.206767037375712	2.2980122580604916	CCTTTGTC
chr1	74000798	74000799	chr1:74000799:C:T	rs1483784	C	T	C	Sox2_MA0143.3	24	0	-	0	0	.
chr1	74357863	74357864	chr1:74357864:G:A	rs3819942	G	A	G	Sox2_MA0143.3	9	0	-	0	0	.
chr1	74357876	74357877	chr1:74357877:A:T	rs6424587	A	T	T	Sox2_MA0143.3	-4	0	-	0	0	.
chr1	74541035	74541036	chr1:74541036:T:C	rs7514705	T	C	T	Sox2_MA0143.3	26	0	-	0	0	.
chr1	74734288	74734289	chr1:74734289:T:C	rs28602706	T	C	T	Sox2_MA0143.3	21	0	+	0	0	.
chr1	74915304	74915305	chr1:74915305:G:T	rs12569094	G	T	G	Sox2_MA0143.3	13	0	-	0	0	.
chr1	75133207	75133208	chr1:75133208:G:A	rs564703016	G	A	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr1	75133214	75133215	chr1:75133215:C:T	rs1526505	C	T	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr1	75248868	75248869	chr1:75248869:T:C	rs649352	T	C	T	Sox2_MA0143.3	-10	0	-	0	0	.
chr1	75331928	75331929	chr1:75331929:A:G	rs115191624	A	G	A	Sox2_MA0143.3	23	0	-	0	0	.
chr1	75448211	75448212	chr1:75448212:G:T	rs2799051	G	T	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr1	75471743	75471744	chr1:75471744:C:T	rs10874305	C	T	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr1	75540118	75540119	chr1:75540119:C:T	rs17303788	C	T	C	Sox2_MA0143.3	0	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr1	75595306	75595307	chr1:75595307:A:T	rs211681	A	T	T	Sox2_MA0143.3	-7	0	+	0	0	.
chr1	75630187	75630188	chr1:75630188:G:A	rs112910346	G	A	G	Sox2_MA0143.3	-14	0	+	0	0	.
chr1	75643662	75643663	chr1:75643663:G:A	rs112984632	G	A	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr1	75643672	75643673	chr1:75643673:A:T	rs814874	A	T	A	Sox2_MA0143.3	-3	0	+	0	0	.
chr1	75723288	75723289	chr1:75723289:A:G	rs117585550	A	G	A	Sox2_MA0143.3	10	0	+	0	0	.
chr1	75727474	75727475	chr1:75727475:C:T	rs149380211	C	T	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr1	75918162	75918163	chr1:75918163:G:A	rs71656863	G	A	G	Sox2_MA0143.3	13	0	-	0	0	.
chr1	75943114	75943115	chr1:75943115:G:A	rs2083175	G	A	G	Sox2_MA0143.3	14	0	-	0	0	.
chr1	76034057	76034058	chr1:76034058:G:C	rs1934816	G	C	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr1	76144202	76144203	chr1:76144203:G:A	rs576466770	G	A	G	Sox2_MA0143.3	19	0	-	0	0	.
chr1	76209482	76209483	chr1:76209483:G:A	rs12563461	G	A	G	Sox2_MA0143.3	27	0	-	0	0	.
chr1	76238188	76238189	chr1:76238189:T:C	rs12074693	T	C	T	Sox2_MA0143.3	-5	0	+	0	0	.
chr1	76548081	76548082	chr1:76548082:T:C	rs182341370	T	C	T	Sox2_MA0143.3	6	1	+	9.613475778572903	2.7047209992576837	CCATTGTT
chr1	76790813	76790814	chr1:76790814:G:C	rs78011426	G	C	G	Sox2_MA0143.3	14	0	+	0	0	.
chr1	76793792	76793793	chr1:76793793:G:A	rs61783212	G	A	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr1	77016501	77016502	chr1:77016502:A:G	rs199687	A	G	A	Sox2_MA0143.3	-3	0	-	0	0	.
chr1	77020374	77020375	chr1:77020375:C:T	rs199683	C	T	T	Sox2_MA0143.3	-9	0	+	0	0	.
chr1	77171110	77171111	chr1:77171111:G:C	rs4399204	G	C	G	Sox2_MA0143.3	14	0	+	0	0	.
chr1	77229973	77229974	chr1:77229974:G:C	rs2799567	G	C	C	Sox2_MA0143.3	5	1	+	9.613475778572903	2.7047209992576837	CCATTGTT
chr1	77249579	77249580	chr1:77249580:A:T	rs1303937	A	T	A	Sox2_MA0143.3	-4	0	-	0	0	.
chr1	77281101	77281102	chr1:77281102:C:G	rs12135530	C	G	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr1	77303625	77303626	chr1:77303626:A:T	rs1670611	A	T	A	Sox2_MA0143.3	21	0	+	0	0	.
chr1	77428246	77428247	chr1:77428247:C:T	rs12137455	C	T	C	Sox2_MA0143.3	16	0	-	0	0	.
chr1	77432002	77432003	chr1:77432003:T:C	rs4949655	T	C	T	Sox2_MA0143.3	23	0	+	0	0	.
chr1	77453624	77453625	chr1:77453625:A:G	rs10873942	A	G	A	Sox2_MA0143.3	27	0	+	0	0	.
chr1	77475838	77475839	chr1:77475839:T:C	rs1532508	T	C	T	Sox2_MA0143.3	12	0	-	0	0	.
chr1	77796937	77796938	chr1:77796938:C:T	rs77602010	C	T	c	Sox2_MA0143.3	-11	0	+	0	0	.
chr1	78047402	78047403	chr1:78047403:G:C	rs74730934	G	C	G	Sox2_MA0143.3	-14	0	+	0	0	.
chr1	78048733	78048734	chr1:78048734:T:C	rs74342526	T	C	T	Sox2_MA0143.3	26	0	+	0	0	.
chr1	78237165	78237166	chr1:78237166:G:A	rs10873967	G	A	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr1	78551996	78551997	chr1:78551997:C:T	rs71643203	C	T	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr1	78608260	78608261	chr1:78608261:T:C	rs116808479	T	C	T	Sox2_MA0143.3	-9	0	-	0	0	.
chr1	78617655	78617656	chr1:78617656:C:T	rs138290124	C	T	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr1	78678290	78678291	chr1:78678291:C:G	rs115951448	C	G	C	Sox2_MA0143.3	20	0	-	0	0	.
chr1	78833601	78833602	chr1:78833602:C:A	rs114715125	C	A	C	Sox2_MA0143.3	10	0	+	0	0	.
chr1	78855455	78855456	chr1:78855456:T:C	rs113236991	T	C	T	Sox2_MA0143.3	-12	0	+	0	0	.
chr1	78973095	78973096	chr1:78973096:T:A	rs6668563	T	A	A	Sox2_MA0143.3	18	0	+	0	0	.
chr1	78990956	78990957	chr1:78990957:C:T	rs12737605	C	T	C	Sox2_MA0143.3	8	0	-	0	0	.
chr1	78990976	78990977	chr1:78990977:A:G	rs11162586	A	G	A	Sox2_MA0143.3	-12	0	-	0	0	.
chr1	79112313	79112314	chr1:79112314:G:A	rs1332814	G	A	G	Sox2_MA0143.3	7	1	-	9.019595766176417	9.613475778572903	CCATTGTC
chr1	79193574	79193575	chr1:79193575:C:T	rs182790855	C	T	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr1	79323812	79323813	chr1:79323813:A:G	rs74952901	A	G	A	Sox2_MA0143.3	4	1	-	8.676919043985553	1.7681642646703322	CCATTGTG
chr1	79430619	79430620	chr1:79430620:G:A	rs184653096	G	A	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr1	79679574	79679575	chr1:79679575:G:T	rs7528981	G	T	G	Sox2_MA0143.3	-9	0	+	0	0	.
chr1	79737174	79737175	chr1:79737175:T:C	rs6656248	T	C	T	Sox2_MA0143.3	13	0	-	0	0	.
chr1	79859645	79859646	chr1:79859646:T:G	rs950282620	T	G	t	Sox2_MA0143.3	-2	0	-	0	0	.
chr1	79959911	79959912	chr1:79959912:T:C	rs184631885	T	C	T	Sox2_MA0143.3	-5	0	-	0	0	.
chr1	80066108	80066109	chr1:80066109:T:A	rs981126	T	A	A	Sox2_MA0143.3	16	0	-	0	0	.
chr1	80279120	80279121	chr1:80279121:C:T	rs1776289	C	T	C	Sox2_MA0143.3	11	0	+	0	0	.
chr1	80384278	80384279	chr1:80384279:C:T	rs17104760	C	T	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr1	80462219	80462220	chr1:80462220:G:T	rs890570	G	T	G	Sox2_MA0143.3	15	0	+	0	0	.
chr1	80695081	80695082	chr1:80695082:T:A	rs7518962	T	A	A	Sox2_MA0143.3	-6	0	-	0	0	.
chr1	80961936	80961937	chr1:80961937:A:C	rs78656645	A	C	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr1	81023619	81023620	chr1:81023620:G:A	rs7541874	G	A	G	Sox2_MA0143.3	-9	0	+	0	0	.
chr1	81075004	81075005	chr1:81075005:G:T	rs17414358	G	T	T	Sox2_MA0143.3	22	0	-	0	0	.
chr1	81113494	81113495	chr1:81113495:C:T	rs824124	C	T	T	Sox2_MA0143.3	-19	0	+	0	0	.
chr1	81238790	81238791	chr1:81238791:C:T	rs17106261	C	T	C	Sox2_MA0143.3	-12	0	-	0	0	.
chr1	81382535	81382536	chr1:81382536:A:G	rs7554357	A	G	A	Sox2_MA0143.3	27	0	+	0	0	.
chr1	81535261	81535262	chr1:81535262:T:C	rs12565040	T	C	T	Sox2_MA0143.3	-13	0	-	0	0	.
chr1	81640700	81640701	chr1:81640701:C:A	rs1263726452	C	A	C	Sox2_MA0143.3	20	0	+	0	0	.
chr1	81660365	81660366	chr1:81660366:A:C	rs74463119	A	C	A	Sox2_MA0143.3	12	0	+	0	0	.
chr1	81663703	81663704	chr1:81663704:T:C	rs4650573	T	C	T	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr1	81731126	81731127	chr1:81731127:G:A	rs12567478	G	A	a	Sox2_MA0143.3	5	1	+	9.019595766176417	2.110840986861197	CCATTGTC
chr1	82073903	82073904	chr1:82073904:A:G	rs11163421	A	G	A	Sox2_MA0143.3	11	0	+	0	0	.
chr1	82401273	82401274	chr1:82401274:T:C	rs76903552	T	C	T	Sox2_MA0143.3	24	0	+	0	0	.
chr1	82579127	82579128	chr1:82579128:C:T	rs10874319	C	T	C	Sox2_MA0143.3	21	0	-	0	0	.
chr1	82787658	82787659	chr1:82787659:G:T	rs7524311	G	T	G	Sox2_MA0143.3	24	0	-	0	0	.
chr1	83105232	83105233	chr1:83105233:G:T	rs7516168	G	T	.	Sox2_MA0143.3	20	0	+	0	0	.
chr1	83370046	83370047	chr1:83370047:T:A	rs189256855	T	A	T	Sox2_MA0143.3	12	0	+	0	0	.
chr1	83446037	83446038	chr1:83446038:A:G	rs2795275	A	G	G	Sox2_MA0143.3	16	0	+	0	0	.
chr1	83631267	83631268	chr1:83631268:T:C	rs12239263	T	C	T	Sox2_MA0143.3	-15	0	+	0	0	.
chr1	83631282	83631283	chr1:83631283:C:G	rs6703917	C	G	C	Sox2_MA0143.3	0	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr1	83741650	83741651	chr1:83741651:T:C	rs12119953	T	C	C	Sox2_MA0143.3	12	0	+	0	0	.
chr1	83749519	83749520	chr1:83749520:T:C	rs7541123	T	C	C	Sox2_MA0143.3	6	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr1	83765409	83765410	chr1:83765410:A:G	rs11163825	A	G	G	Sox2_MA0143.3	25	0	-	0	0	.
chr1	83924276	83924277	chr1:83924277:C:T	rs6694752	C	T	T	Sox2_MA0143.3	-16	0	-	0	0	.
chr1	84011095	84011096	chr1:84011096:T:C	rs12403631	T	C	T	Sox2_MA0143.3	14	0	+	0	0	.
chr1	84171666	84171667	chr1:84171667:A:G	rs61360062	A	G	A	Sox2_MA0143.3	15	0	+	0	0	.
chr1	84262445	84262446	chr1:84262446:T:G	rs11163932	T	G	G	Sox2_MA0143.3	16	0	-	0	0	.
chr1	84319722	84319723	chr1:84319723:G:A	rs316663	G	A	A	Sox2_MA0143.3	-7	0	+	0	0	.
chr1	84379183	84379184	chr1:84379184:A:G	rs12038846	A	G	A	Sox2_MA0143.3	26	0	+	0	0	.
chr1	84379684	84379685	chr1:84379685:C:T	rs315515	C	T	C	Sox2_MA0143.3	0	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr1	84387927	84387928	chr1:84387928:A:C	rs576888	A	C	A	Sox2_MA0143.3	2	1	+	8.676919043985553	2.5582713367092715	CCATTGTG
chr1	84387929	84387930	chr1:84387930:T:A	chr1:84387930:T:A	T	A	T	Sox2_MA0143.3	4	1	+	8.676919043985553	1.7681642646703322	CCATTGTG
chr1	84427510	84427511	chr1:84427511:A:G	rs997599419	A	G	A	Sox2_MA0143.3	-4	0	-	0	0	.
chr1	84619396	84619397	chr1:84619397:C:T	rs12754287	C	T	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr1	84728184	84728185	chr1:84728185:A:G	rs186442658	A	G	A	Sox2_MA0143.3	16	0	-	0	0	.
chr1	84781984	84781985	chr1:84781985:G:A	rs9324135	G	A	A	Sox2_MA0143.3	0	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr1	84852692	84852693	chr1:84852693:G:A	rs17369470	G	A	G	Sox2_MA0143.3	25	0	-	0	0	.
chr1	84887575	84887576	chr1:84887576:A:G	rs558532134	A	G	A	Sox2_MA0143.3	-11	0	-	0	0	.
chr1	84904042	84904043	chr1:84904043:C:T	rs11161483	C	T	T	Sox2_MA0143.3	-8	0	-	0	0	.
chr1	85200028	85200029	chr1:85200029:C:G	rs184507837	C	G	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr1	85220808	85220809	chr1:85220809:C:T	rs12137293	C	T	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr1	85258599	85258600	chr1:85258600:C:T	rs75989026	C	T	C	Sox2_MA0143.3	8	0	+	0	0	.
chr1	85305768	85305769	chr1:85305769:C:T	rs2012099	C	T	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr1	85340321	85340322	chr1:85340322:C:T	rs233071	C	T	T	Sox2_MA0143.3	-5	0	+	0	0	.
chr1	85407332	85407333	chr1:85407333:T:C	rs12027461	T	C	T	Sox2_MA0143.3	2	1	-	9.613475778572903	3.494828071296623	CCATTGTT
chr1	85407553	85407554	chr1:85407554:C:T	rs12133722	C	T	C	Sox2_MA0143.3	17	0	-	0	0	.
chr1	85473632	85473633	chr1:85473633:C:T	rs150926317	C	T	C	Sox2_MA0143.3	9	0	-	0	0	.
chr1	85502888	85502889	chr1:85502889:G:T	rs572245	G	T	T	Sox2_MA0143.3	-12	0	+	0	0	.
chr1	85502911	85502912	chr1:85502912:T:G	rs509112	T	G	T	Sox2_MA0143.3	11	0	+	0	0	.
chr1	85569414	85569415	chr1:85569415:C:A	rs17127910	C	A	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr1	85580595	85580596	chr1:85580596:C:A	rs192171023	C	A	C	Sox2_MA0143.3	7	1	-	8.864090315184848	9.800647049772198	CCTTTGTG
chr1	85606724	85606725	chr1:85606725:T:G	rs11578464	T	G	T	Sox2_MA0143.3	-18	0	+	0	0	.
chr1	85609414	85609415	chr1:85609415:A:G	rs17394091	A	G	A	Sox2_MA0143.3	-9	0	+	0	0	.
chr1	85609437	85609438	chr1:85609438:G:A	rs61783715	G	A	G	Sox2_MA0143.3	14	0	+	0	0	.
chr1	85616064	85616065	chr1:85616065:T:C	rs567739896	T	C	T	Sox2_MA0143.3	2	1	-	9.019595766176417	2.900948058900136	CCATTGTC
chr1	85707676	85707677	chr1:85707677:G:A	rs749864132	G	A	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr1	85708090	85708091	chr1:85708091:C:A	rs148103860	C	A	C	Sox2_MA0143.3	7	1	+	9.206767037375712	3.5547341015215945	CCTTTGTC
chr1	85818731	85818732	chr1:85818732:T:C	rs566195664	T	C	T	Sox2_MA0143.3	12	0	+	0	0	.
chr1	85947338	85947339	chr1:85947339:C:T	rs12723176	C	T	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr1	86054458	86054459	chr1:86054459:A:G	rs12730639	A	G	A	Sox2_MA0143.3	27	0	-	0	0	.
chr1	86184627	86184628	chr1:86184628:C:G	rs556143711	C	G	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr1	86310251	86310252	chr1:86310252:T:G	rs6704104	T	G	G	Sox2_MA0143.3	11	0	-	0	0	.
chr1	86586240	86586241	chr1:86586241:G:T	rs17451001	G	T	G	Sox2_MA0143.3	1	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr1	86616562	86616563	chr1:86616563:A:T	rs6700949	A	T	T	Sox2_MA0143.3	-9	0	-	0	0	.
chr1	86640339	86640340	chr1:86640340:C:T	rs61802878	C	T	C	Sox2_MA0143.3	14	0	-	0	0	.
chr1	86648561	86648562	chr1:86648562:G:C	rs1517903	G	C	G	Sox2_MA0143.3	8	0	-	0	0	.
chr1	86648571	86648572	chr1:86648572:G:T	rs113916232	G	T	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr1	86746244	86746245	chr1:86746245:A:G	rs182401439	A	G	A	Sox2_MA0143.3	16	0	-	0	0	.
chr1	86753751	86753752	chr1:86753752:A:G	rs56047742	A	G	A	Sox2_MA0143.3	6	1	-	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr1	86781038	86781039	chr1:86781039:C:G	rs1008340885	C	G	C	Sox2_MA0143.3	15	0	-	0	0	.
chr1	86885438	86885439	chr1:86885439:G:A	rs547127	G	A	G	Sox2_MA0143.3	0	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr1	87116017	87116018	chr1:87116018:C:T	rs1199669	C	T	T	Sox2_MA0143.3	5	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr1	87284729	87284730	chr1:87284730:G:A	rs4233323	G	A	A	Sox2_MA0143.3	16	0	-	0	0	.
chr1	87284754	87284755	chr1:87284755:A:G	rs58153899	A	G	A	Sox2_MA0143.3	-9	0	-	0	0	.
chr1	87328380	87328381	chr1:87328381:T:G	rs991196626	T	G	T	Sox2_MA0143.3	26	0	+	0	0	.
chr1	87359800	87359801	chr1:87359801:A:C	rs12734641	A	C	A	Sox2_MA0143.3	-3	0	+	0	0	.
chr1	87370628	87370629	chr1:87370629:G:A	rs61773267	G	A	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr1	87370758	87370759	chr1:87370759:A:T	rs17456473	A	T	A	Sox2_MA0143.3	-3	0	+	0	0	.
chr1	87404395	87404396	chr1:87404396:A:G	rs114852756	A	G	A	Sox2_MA0143.3	-4	0	-	0	0	.
chr1	87644076	87644077	chr1:87644077:C:A	rs767409731	C	A	C	Sox2_MA0143.3	12	0	-	0	0	.
chr1	87651954	87651955	chr1:87651955:A:G	rs1490168	A	G	A	Sox2_MA0143.3	11	0	-	0	0	.
chr1	87686048	87686049	chr1:87686049:G:A	rs753281340	G	A	G	Sox2_MA0143.3	19	0	-	0	0	.
chr1	87986733	87986734	chr1:87986734:C:T	rs12095961	C	T	T	Sox2_MA0143.3	-7	0	-	0	0	.
chr1	88043106	88043107	chr1:88043107:A:G	rs12568243	A	G	G	Sox2_MA0143.3	14	0	-	0	0	.
chr1	88054421	88054422	chr1:88054422:C:T	rs12561832	C	T	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr1	88180647	88180648	chr1:88180648:T:C	rs17130298	T	C	T	Sox2_MA0143.3	9	0	+	0	0	.
chr1	88451422	88451423	chr1:88451423:G:A	rs1498905	G	A	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr1	88535075	88535076	chr1:88535076:T:C	rs116739777	T	C	T	Sox2_MA0143.3	3	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr1	88561095	88561096	chr1:88561096:T:C	rs118104519	T	C	T	Sox2_MA0143.3	3	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr1	88612306	88612307	chr1:88612307:G:A	rs658918	G	A	A	Sox2_MA0143.3	5	1	+	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr1	88612466	88612467	chr1:88612467:G:A	rs78859256	G	A	A	Sox2_MA0143.3	19	0	+	0	0	.
chr1	88774520	88774521	chr1:88774521:A:C	rs151193647	A	C	A	Sox2_MA0143.3	-20	0	-	0	0	.
chr1	88891320	88891321	chr1:88891321:T:C	rs533044599	T	C	T	Sox2_MA0143.3	-15	0	+	0	0	.
chr1	89023109	89023110	chr1:89023110:G:A	rs12096961	G	A	a	Sox2_MA0143.3	17	0	-	0	0	.
chr1	89128769	89128770	chr1:89128770:G:A	rs114912801	G	A	G	Sox2_MA0143.3	11	0	+	0	0	.
chr1	89198680	89198681	chr1:89198681:A:C	rs946924712	A	C	A	Sox2_MA0143.3	8	0	+	0	0	.
chr1	89272389	89272390	chr1:89272390:T:C	rs112818241	T	C	T	Sox2_MA0143.3	6	1	+	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr1	89274645	89274646	chr1:89274646:T:C	rs1274840060	T	C	T	Sox2_MA0143.3	3	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr1	89274661	89274662	chr1:89274662:A:C	rs114059386	A	C	A	Sox2_MA0143.3	19	0	+	0	0	.
chr1	89277571	89277572	chr1:89277572:T:C	rs958516367	T	C	T	Sox2_MA0143.3	6	1	+	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr1	89428625	89428626	chr1:89428626:G:A	rs7553389	G	A	G	Sox2_MA0143.3	14	0	+	0	0	.
chr1	89515816	89515817	chr1:89515817:T:C	rs11580069	T	C	T	Sox2_MA0143.3	-12	0	+	0	0	.
chr1	89524867	89524868	chr1:89524868:C:A	rs554579506	C	A	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr1	89524868	89524869	chr1:89524869:G:A	rs552975182	G	A	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr1	89528610	89528611	chr1:89528611:T:G	rs12723409	T	G	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr1	89587889	89587890	chr1:89587890:A:C	rs359943	A	C	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr1	89600820	89600821	chr1:89600821:G:C	rs10518431	G	C	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr1	89600855	89600856	chr1:89600856:T:C	rs6428558	T	C	T	Sox2_MA0143.3	25	0	+	0	0	.
chr1	89840571	89840572	chr1:89840572:G:A	rs35704457	G	A	G	Sox2_MA0143.3	-5	0	+	0	0	.
chr1	89841269	89841270	chr1:89841270:C:A	rs66995711	C	A	A	Sox2_MA0143.3	-8	0	+	0	0	.
chr1	89887482	89887483	chr1:89887483:T:C	rs1385570098	T	C	T	Sox2_MA0143.3	3	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr1	89887495	89887496	chr1:89887496:A:G	rs2801992	A	G	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr1	89907096	89907097	chr1:89907097:T:C	rs79094904	T	C	T	Sox2_MA0143.3	27	0	-	0	0	.
chr1	89974372	89974373	chr1:89974373:A:G	rs115148307	A	G	G	Sox2_MA0143.3	18	0	+	0	0	.
chr1	90102805	90102806	chr1:90102806:C:G	rs2813758	C	G	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr1	90273732	90273733	chr1:90273733:C:A	rs3923534	C	A	A	Sox2_MA0143.3	22	0	+	0	0	.
chr1	90357140	90357141	chr1:90357141:A:T	rs1988677	A	T	T	Sox2_MA0143.3	-13	0	+	0	0	.
chr1	90357147	90357148	chr1:90357148:G:A	rs1988678	G	A	A	Sox2_MA0143.3	-6	0	+	0	0	.
chr1	90494222	90494223	chr1:90494223:T:C	rs1832256	T	C	t	Sox2_MA0143.3	24	0	+	0	0	.
chr1	90501226	90501227	chr1:90501227:A:G	rs115340817	A	G	A	Sox2_MA0143.3	8	0	-	0	0	.
chr1	90728133	90728134	chr1:90728134:T:C	rs12568187	T	C	T	Sox2_MA0143.3	-14	0	-	0	0	.
chr1	91037940	91037941	chr1:91037941:G:A	rs35808132	G	A	G	Sox2_MA0143.3	22	0	+	0	0	.
chr1	91121138	91121139	chr1:91121139:C:A	rs240506	C	A	A	Sox2_MA0143.3	19	0	-	0	0	.
chr1	91123331	91123332	chr1:91123332:G:A	rs240509	G	A	A	Sox2_MA0143.3	-7	0	+	0	0	.
chr1	91242955	91242956	chr1:91242956:A:G	rs605146	A	G	A	Sox2_MA0143.3	19	0	-	0	0	.
chr1	91284295	91284296	chr1:91284296:T:C	rs111614199	T	C	T	Sox2_MA0143.3	21	0	+	0	0	.
chr1	91441015	91441016	chr1:91441016:A:C	rs7515660	A	C	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr1	91527830	91527831	chr1:91527831:A:G	rs2893175	A	G	A	Sox2_MA0143.3	-13	0	+	0	0	.
chr1	91569745	91569746	chr1:91569746:G:A	rs6689719	G	A	G	Sox2_MA0143.3	23	0	-	0	0	.
chr1	91570782	91570783	chr1:91570783:T:C	rs12141173	T	C	T	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr1	91578985	91578986	chr1:91578986:A:G	rs76922852	A	G	A	Sox2_MA0143.3	23	0	-	0	0	.
chr1	91631950	91631951	chr1:91631951:A:G	rs2478165	A	G	G	Sox2_MA0143.3	21	0	-	0	0	.
chr1	91697920	91697921	chr1:91697921:A:G	rs7548904	A	G	A	Sox2_MA0143.3	-3	0	-	0	0	.
chr1	91732012	91732013	chr1:91732013:G:A	rs115117557	G	A	G	Sox2_MA0143.3	17	0	-	0	0	.
chr1	91732036	91732037	chr1:91732037:C:G	rs79431786	C	G	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr1	91732042	91732043	chr1:91732043:T:C	rs142807311	T	C	T	Sox2_MA0143.3	-13	0	-	0	0	.
chr1	91781975	91781976	chr1:91781976:T:C	rs61781086	T	C	T	Sox2_MA0143.3	12	0	-	0	0	.
chr1	91791370	91791371	chr1:91791371:C:T	rs2129974	C	T	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr1	91795362	91795363	chr1:91795363:C:T	rs428815	C	T	C	Sox2_MA0143.3	23	0	+	0	0	.
chr1	91795811	91795812	chr1:91795812:T:C	rs6691098	T	C	T	Sox2_MA0143.3	18	0	-	0	0	.
chr1	91915013	91915014	chr1:91915014:T:G	rs56323961	T	G	T	Sox2_MA0143.3	20	0	-	0	0	.
chr1	91920017	91920018	chr1:91920018:C:T	rs12021995	C	T	C	Sox2_MA0143.3	18	0	+	0	0	.
chr1	92134461	92134462	chr1:92134462:T:G	rs12073274	T	G	T	Sox2_MA0143.3	2	1	+	9.800647049772198	3.494828071296623	CCTTTGTT
chr1	92299392	92299393	chr1:92299393:C:G	rs17131621	C	G	G	Sox2_MA0143.3	5	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr1	92299397	92299398	chr1:92299398:G:A	rs181835007	G	A	G	Sox2_MA0143.3	0	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr1	92299414	92299415	chr1:92299415:G:C	rs58820626	G	C	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr1	92381233	92381234	chr1:92381234:C:T	rs77280763	C	T	C	Sox2_MA0143.3	1	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr1	92709209	92709210	chr1:92709210:G:A	rs74101329	G	A	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr1	93448668	93448669	chr1:93448669:C:T	rs941654564	C	T	C	Sox2_MA0143.3	1	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr1	93448712	93448713	chr1:93448713:C:T	rs550322572	C	T	C	Sox2_MA0143.3	8	0	+	0	0	.
chr1	93531136	93531137	chr1:93531137:T:C	rs1079750	T	C	T	Sox2_MA0143.3	22	0	-	0	0	.
chr1	93575614	93575615	chr1:93575615:C:G	rs151232391	C	G	C	Sox2_MA0143.3	22	0	-	0	0	.
chr1	93598212	93598213	chr1:93598213:G:A	rs567676069	G	A	G	Sox2_MA0143.3	0	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr1	93636457	93636458	chr1:93636458:G:A	rs236278	G	A	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr1	93637893	93637894	chr1:93637894:C:T	rs17110198	C	T	C	Sox2_MA0143.3	13	0	-	0	0	.
chr1	93670207	93670208	chr1:93670208:G:A	rs769617524	G	A	G	Sox2_MA0143.3	20	0	-	0	0	.
chr1	93672333	93672334	chr1:93672334:C:G	rs3754200	C	G	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr1	93676225	93676226	chr1:93676226:T:C	rs188797124	T	C	T	Sox2_MA0143.3	-12	0	-	0	0	.
chr1	93722555	93722556	chr1:93722556:G:A	rs980418727	G	A	G	Sox2_MA0143.3	-5	0	+	0	0	.
chr1	93732851	93732852	chr1:93732852:T:C	rs145747714	T	C	T	Sox2_MA0143.3	27	0	-	0	0	.
chr1	93738895	93738896	chr1:93738896:C:G	rs947343	C	G	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr1	93754327	93754328	chr1:93754328:C:T	rs369558156	C	T	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr1	93754369	93754370	chr1:93754370:G:A	rs12408797	G	A	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr1	93754527	93754528	chr1:93754528:T:C	rs747336759	T	C	T	Sox2_MA0143.3	4	1	+	8.676919043985553	1.7681642646703322	CCATTGTG
chr1	93768999	93769000	chr1:93769000:G:A	rs1264997391	G	A	G	Sox2_MA0143.3	-2	0	+	0	0	.
chr1	93769000	93769001	chr1:93769001:C:T	rs6660794	C	T	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr1	93814269	93814270	chr1:93814270:C:A	rs139027331	C	A	C	Sox2_MA0143.3	18	0	-	0	0	.
chr1	93879283	93879284	chr1:93879284:A:C	rs6681078	A	C	A	Sox2_MA0143.3	19	0	-	0	0	.
chr1	93879291	93879292	chr1:93879292:C:T	rs533631006	C	T	C	Sox2_MA0143.3	11	0	-	0	0	.
chr1	93879303	93879304	chr1:93879304:G:T	rs41292665	G	T	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr1	93879316	93879317	chr1:93879317:T:G	rs151140281	T	G	T	Sox2_MA0143.3	-14	0	-	0	0	.
chr1	93989891	93989892	chr1:93989892:A:G	rs12062935	A	G	A	Sox2_MA0143.3	4	1	-	8.864090315184848	1.9553355358696274	CCTTTGTG
chr1	94044284	94044285	chr1:94044285:T:C	rs60221131	T	C	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr1	94044442	94044443	chr1:94044443:A:G	rs17110925	A	G	A	Sox2_MA0143.3	24	0	-	0	0	.
chr1	94097051	94097052	chr1:94097052:T:G	rs536678285	T	G	T	Sox2_MA0143.3	24	0	+	0	0	.
chr1	94114115	94114116	chr1:94114116:G:A	rs3789440	G	A	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr1	94126238	94126239	chr1:94126239:C:T	rs34497591	C	T	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr1	94328321	94328322	chr1:94328322:G:T	rs7535547	G	T	G	Sox2_MA0143.3	0	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr1	94531731	94531732	chr1:94531732:G:A	rs1324214	G	A	G	Sox2_MA0143.3	26	0	-	0	0	.
chr1	94580554	94580555	chr1:94580555:C:T	chr1:94580555:C:T	C	T	C	Sox2_MA0143.3	-12	0	-	0	0	.
chr1	94727456	94727457	chr1:94727457:A:G	rs10874889	A	G	A	Sox2_MA0143.3	-18	0	+	0	0	.
chr1	94792112	94792113	chr1:94792113:C:T	rs12758540	C	T	C	Sox2_MA0143.3	10	0	-	0	0	.
chr1	94804195	94804196	chr1:94804196:C:A	rs11590799	C	A	C	Sox2_MA0143.3	15	0	-	0	0	.
chr1	94821813	94821814	chr1:94821814:T:G	rs60716620	T	G	T	Sox2_MA0143.3	-6	0	+	0	0	.
chr1	94855222	94855223	chr1:94855223:G:A	rs115848434	G	A	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr1	94874103	94874104	chr1:94874104:G:T	rs9432602	G	T	G	Sox2_MA0143.3	18	0	-	0	0	.
chr1	94901859	94901860	chr1:94901860:C:T	rs2275612	C	T	T	Sox2_MA0143.3	12	0	-	0	0	.
chr1	94925797	94925798	chr1:94925798:T:G	chr1:94925798:T:G	T	G	T	Sox2_MA0143.3	4	1	+	8.864090315184848	1.9553355358696274	CCTTTGTG
chr1	94927918	94927919	chr1:94927919:A:C	rs909784516	A	C	A	Sox2_MA0143.3	-9	0	+	0	0	.
chr1	94942935	94942936	chr1:94942936:G:A	rs1146461	G	A	A	Sox2_MA0143.3	18	0	+	0	0	.
chr1	94955935	94955936	chr1:94955936:G:A	rs1351688979	G	A	G	Sox2_MA0143.3	8	0	-	0	0	.
chr1	94975314	94975315	chr1:94975315:A:G	rs7539517	A	G	A	Sox2_MA0143.3	-18	0	+	0	0	.
chr1	95061548	95061549	chr1:95061549:T:C	rs60491236	T	C	T	Sox2_MA0143.3	-17	0	-	0	0	.
chr1	95087084	95087085	chr1:95087085:T:C	rs12136552	T	C	T	Sox2_MA0143.3	10	0	+	0	0	.
chr1	95096307	95096308	chr1:95096308:G:A	rs12060761	G	A	G	Sox2_MA0143.3	21	0	+	0	0	.
chr1	95119990	95119991	chr1:95119991:A:T	rs12067935	A	T	A	Sox2_MA0143.3	18	0	-	0	0	.
chr1	95138431	95138432	chr1:95138432:T:C	rs35917978	T	C	T	Sox2_MA0143.3	25	0	-	0	0	.
chr1	95231534	95231535	chr1:95231535:T:C	rs6671408	T	C	C	Sox2_MA0143.3	12	0	+	0	0	.
chr1	95308507	95308508	chr1:95308508:A:G	rs12116466	A	G	A	Sox2_MA0143.3	-8	0	+	0	0	.
chr1	95435909	95435910	chr1:95435910:C:T	rs116205589	C	T	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr1	95476097	95476098	chr1:95476098:C:G	rs1337551	C	G	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr1	95685156	95685157	chr1:95685157:G:A	rs11165466	G	A	A	Sox2_MA0143.3	-12	0	+	0	0	.
chr1	95778350	95778351	chr1:95778351:C:T	rs77811559	C	T	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr1	95829458	95829459	chr1:95829459:C:T	rs1418456	C	T	T	Sox2_MA0143.3	19	0	+	0	0	.
chr1	95848348	95848349	chr1:95848349:C:A	rs1573063	C	A	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr1	96033893	96033894	chr1:96033894:C:A	rs161116	C	A	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr1	96236428	96236429	chr1:96236429:C:T	rs376691235	C	T	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr1	96329646	96329647	chr1:96329647:C:T	rs12744985	C	T	T	Sox2_MA0143.3	-5	0	+	0	0	.
chr1	96376754	96376755	chr1:96376755:C:A	rs4949930	C	A	A	Sox2_MA0143.3	14	0	-	0	0	.
chr1	96470018	96470019	chr1:96470019:C:T	rs543387063	C	T	-	Sox2_MA0143.3	16	0	-	0	0	.
chr1	96473921	96473922	chr1:96473922:G:A	rs116069303	G	A	G	Sox2_MA0143.3	0	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr1	96711652	96711653	chr1:96711653:A:G	rs1591866	A	G	A	Sox2_MA0143.3	21	0	-	0	0	.
chr1	96711687	96711688	chr1:96711688:C:G	rs1591865	C	G	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr1	96722688	96722689	chr1:96722689:A:G	chr1:96722689:A:G	A	G	A	Sox2_MA0143.3	3	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr1	96880711	96880712	chr1:96880712:G:T	rs1494806	G	T	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr1	96934228	96934229	chr1:96934229:G:A	rs2391808	G	A	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr1	96934612	96934613	chr1:96934613:A:G	rs2130366	A	G	G	Sox2_MA0143.3	-2	0	+	0	0	.
chr1	97079203	97079204	chr1:97079204:C:G	rs17116357	C	G	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr1	97107112	97107113	chr1:97107113:C:T	rs6686861	C	T	C	Sox2_MA0143.3	14	0	-	0	0	.
chr1	97601590	97601591	chr1:97601591:G:A	rs2786498	G	A	A	Sox2_MA0143.3	11	0	-	0	0	.
chr1	98009210	98009211	chr1:98009211:C:T	rs2391902	C	T	C	Sox2_MA0143.3	23	0	+	0	0	.
chr1	98044377	98044378	chr1:98044378:C:G	rs114894221	C	G	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr1	98051225	98051226	chr1:98051226:C:T	chr1:98051226:C:T	C	T	C	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr1	98127073	98127074	chr1:98127074:T:C	rs1487299	T	C	T	Sox2_MA0143.3	8	0	+	0	0	.
chr1	98197619	98197620	chr1:98197620:T:G	rs78247481	T	G	T	Sox2_MA0143.3	4	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr1	98324518	98324519	chr1:98324519:T:C	rs4950098	T	C	T	Sox2_MA0143.3	11	0	-	0	0	.
chr1	98460831	98460832	chr1:98460832:T:C	rs316039	T	C	C	Sox2_MA0143.3	25	0	-	0	0	.
chr1	98709055	98709056	chr1:98709056:C:A	rs9728993	C	A	C	Sox2_MA0143.3	1	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr1	98806122	98806123	chr1:98806123:C:T	rs12759444	C	T	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr1	98904796	98904797	chr1:98904797:T:A	rs1481505	T	A	A	Sox2_MA0143.3	-6	0	-	0	0	.
chr1	98914577	98914578	chr1:98914578:A:G	rs1031962	A	G	G	Sox2_MA0143.3	-3	0	+	0	0	.
chr1	98914590	98914591	chr1:98914591:C:T	rs72730315	C	T	C	Sox2_MA0143.3	10	0	+	0	0	.
chr1	99463521	99463522	chr1:99463522:T:G	rs182555137	T	G	T	Sox2_MA0143.3	-2	0	-	0	0	.
chr1	99560881	99560882	chr1:99560882:G:C	rs10875236	G	C	C	Sox2_MA0143.3	9	0	-	0	0	.
chr1	99590820	99590821	chr1:99590821:T:C	rs571666158	T	C	T	Sox2_MA0143.3	12	0	-	0	0	.
chr1	99600958	99600959	chr1:99600959:C:T	rs7518025	C	T	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr1	99615790	99615791	chr1:99615791:C:G	rs835008	C	G	G	Sox2_MA0143.3	27	0	-	0	0	.
chr1	99691101	99691102	chr1:99691102:T:C	rs3766588	T	C	C	Sox2_MA0143.3	8	0	-	0	0	.
chr1	99737286	99737287	chr1:99737287:C:G	rs11166315	C	G	C	Sox2_MA0143.3	21	0	-	0	0	.
chr1	99820995	99820996	chr1:99820996:A:T	rs3920022	A	T	A	Sox2_MA0143.3	21	0	-	0	0	.
chr1	99836957	99836958	chr1:99836958:G:A	rs17121287	G	A	G	Sox2_MA0143.3	8	0	+	0	0	.
chr1	99848839	99848840	chr1:99848840:A:C	rs72725942	A	C	A	Sox2_MA0143.3	-4	0	+	0	0	.
chr1	99914694	99914695	chr1:99914695:T:A	rs3820157	T	A	T	Sox2_MA0143.3	27	0	-	0	0	.
chr1	100188947	100188948	chr1:100188948:C:G	rs182980145	C	G	C	Sox2_MA0143.3	24	0	+	0	0	.
chr1	100357577	100357578	chr1:100357578:A:T	rs12405316	A	T	A	Sox2_MA0143.3	7	1	+	3.5547341015215945	9.800647049772198	CCTTTGTA
chr1	100358464	100358465	chr1:100358465:C:T	chr1:100358465:C:T	C	T	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr1	100459868	100459869	chr1:100459869:G:T	rs76551128	G	T	G	Sox2_MA0143.3	9	0	+	0	0	.
chr1	100540327	100540328	chr1:100540328:C:T	rs112754425	C	T	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr1	100578340	100578341	chr1:100578341:G:A	rs10783141	G	A	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr1	100578345	100578346	chr1:100578346:C:G	rs10783142	C	G	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr1	100578371	100578372	chr1:100578372:A:C	rs10493929	A	C	C	Sox2_MA0143.3	21	0	+	0	0	.
chr1	100810520	100810521	chr1:100810521:C:T	rs114205568	C	T	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr1	100810538	100810539	chr1:100810539:G:A	rs4908101	G	A	G	Sox2_MA0143.3	11	0	+	0	0	.
chr1	100810546	100810547	chr1:100810547:G:C	rs56191712	G	C	G	Sox2_MA0143.3	19	0	+	0	0	.
chr1	100810758	100810759	chr1:100810759:C:G	rs12040347	C	G	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr1	100896776	100896777	chr1:100896777:T:C	chr1:100896777:T:C	T	C	T	Sox2_MA0143.3	2	1	+	9.800647049772198	3.494828071296623	CCTTTGTT
chr1	101081142	101081143	chr1:101081143:A:G	rs1060481	A	G	G	Sox2_MA0143.3	-9	0	+	0	0	.
chr1	101136034	101136035	chr1:101136035:T:C	rs115502038	T	C	T	Sox2_MA0143.3	-20	0	-	0	0	.
chr1	101153819	101153820	chr1:101153820:A:G	rs1329455	A	G	A	Sox2_MA0143.3	17	0	-	0	0	.
chr1	101179341	101179342	chr1:101179342:G:A	rs12090198	G	A	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr1	101258566	101258567	chr1:101258567:G:A	rs12753532	G	A	A	Sox2_MA0143.3	-1	0	-	0	0	.
chr1	101302973	101302974	chr1:101302974:A:C	rs188086395	A	C	A	Sox2_MA0143.3	-3	0	+	0	0	.
chr1	101399455	101399456	chr1:101399456:C:T	rs12041998	C	T	C	Sox2_MA0143.3	25	0	+	0	0	.
chr1	101507918	101507919	chr1:101507919:T:G	rs450404	T	G	T	Sox2_MA0143.3	-20	0	+	0	0	.
chr1	101570808	101570809	chr1:101570809:C:T	rs12124544	C	T	C	Sox2_MA0143.3	14	0	+	0	0	.
chr1	101860602	101860603	chr1:101860603:T:C	rs2050572	T	C	T	Sox2_MA0143.3	-12	0	+	0	0	.
chr1	101915815	101915816	chr1:101915816:T:C	rs6577283	T	C	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr1	102114428	102114429	chr1:102114429:T:C	rs12025009	T	C	T	Sox2_MA0143.3	12	0	-	0	0	.
chr1	102156127	102156128	chr1:102156128:T:C	rs12131245	T	C	T	Sox2_MA0143.3	11	0	+	0	0	.
chr1	102263059	102263060	chr1:102263060:C:T	rs7523569	C	T	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr1	102263091	102263092	chr1:102263092:A:G	rs541745695	A	G	A	Sox2_MA0143.3	22	0	+	0	0	.
chr1	102365315	102365316	chr1:102365316:A:G	rs1418097	A	G	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr1	102693564	102693565	chr1:102693565:A:G	rs1376358	A	G	G	Sox2_MA0143.3	4	1	-	9.206767037375712	2.2980122580604916	CCTTTGTC
chr1	102833565	102833566	chr1:102833566:C:A	rs79866824	C	A	C	Sox2_MA0143.3	5	1	-	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr1	102892721	102892722	chr1:102892722:T:C	rs962453	T	C	T	Sox2_MA0143.3	-6	0	-	0	0	.
chr1	102919843	102919844	chr1:102919844:C:A	rs116464574	C	A	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr1	102944567	102944568	chr1:102944568:G:A	rs12084902	G	A	G	Sox2_MA0143.3	24	0	-	0	0	.
chr1	103074420	103074421	chr1:103074421:G:T	rs35908252	G	T	G	Sox2_MA0143.3	-5	0	+	0	0	.
chr1	103074424	103074425	chr1:103074425:A:G	rs7522293	A	G	A	Sox2_MA0143.3	-1	0	+	0	0	.
chr1	103209208	103209209	chr1:103209209:A:G	rs6577364	A	G	A	Sox2_MA0143.3	15	0	+	0	0	.
chr1	103285453	103285454	chr1:103285454:G:A	rs2141332	G	A	G	Sox2_MA0143.3	-9	0	+	0	0	.
chr1	103319735	103319736	chr1:103319736:C:G	rs956351439	C	G	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr1	103780846	103780847	chr1:103780847:G:A	rs34797164	G	A	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr1	103902693	103902694	chr1:103902694:G:A	rs1930208	G	A	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr1	104084571	104084572	chr1:104084572:G:A	rs729107	G	A	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr1	104239265	104239266	chr1:104239266:T:C	rs1928314	T	C	T	Sox2_MA0143.3	12	0	-	0	0	.
chr1	104539769	104539770	chr1:104539770:G:T	rs61813845	G	T	T	Sox2_MA0143.3	-18	0	+	0	0	.
chr1	104572962	104572963	chr1:104572963:A:T	rs1448393	A	T	a	Sox2_MA0143.3	11	0	-	0	0	.
chr1	104762764	104762765	chr1:104762765:T:G	rs922720	T	G	T	Sox2_MA0143.3	-15	0	+	0	0	.
chr1	104782915	104782916	chr1:104782916:G:A	rs12036613	G	A	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr1	104969197	104969198	chr1:104969198:A:G	rs6583101	A	G	A	Sox2_MA0143.3	-8	0	+	0	0	.
chr1	105060546	105060547	chr1:105060547:A:G	rs7536308	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr1	105138953	105138954	chr1:105138954:A:T	rs11590130	A	T	T	Sox2_MA0143.3	-19	0	-	0	0	.
chr1	105204640	105204641	chr1:105204641:G:A	rs12743845	G	A	G	Sox2_MA0143.3	0	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr1	105205181	105205182	chr1:105205182:T:C	rs72685577	T	C	T	Sox2_MA0143.3	15	0	-	0	0	.
chr1	105318161	105318162	chr1:105318162:T:C	rs2491631	T	C	T	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr1	105318168	105318169	chr1:105318169:T:C	rs2491630	T	C	T	Sox2_MA0143.3	10	0	+	0	0	.
chr1	105483709	105483710	chr1:105483710:A:G	rs1913979	A	G	A	Sox2_MA0143.3	16	0	+	0	0	.
chr1	105910042	105910043	chr1:105910043:A:C	rs6678416	A	C	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr1	105914774	105914775	chr1:105914775:G:A	rs12086844	G	A	G	Sox2_MA0143.3	19	0	-	0	0	.
chr1	106515646	106515647	chr1:106515647:C:G	rs2031503	C	G	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr1	106620492	106620493	chr1:106620493:A:G	rs6694882	A	G	A	Sox2_MA0143.3	23	0	+	0	0	.
chr1	106622052	106622053	chr1:106622053:A:G	rs60683054	A	G	A	Sox2_MA0143.3	-10	0	-	0	0	.
chr1	106799474	106799475	chr1:106799475:C:T	rs1519889	C	T	T	Sox2_MA0143.3	17	0	-	0	0	.
chr1	107056379	107056380	chr1:107056380:A:C	rs1762482	A	C	A	Sox2_MA0143.3	16	0	-	0	0	.
chr1	107171583	107171584	chr1:107171584:G:C	rs777279412	G	C	G	Sox2_MA0143.3	21	0	+	0	0	.
chr1	107185341	107185342	chr1:107185342:A:G	rs4437905	A	G	A	Sox2_MA0143.3	18	0	+	0	0	.
chr1	107185348	107185349	chr1:107185349:G:C	rs4626914	G	C	C	Sox2_MA0143.3	25	0	+	0	0	.
chr1	107248239	107248240	chr1:107248240:A:G	rs17461280	A	G	A	Sox2_MA0143.3	14	0	+	0	0	.
chr1	107390152	107390153	chr1:107390153:C:T	rs2819987	C	T	T	Sox2_MA0143.3	-6	0	-	0	0	.
chr1	107472988	107472989	chr1:107472989:G:A	rs10785825	G	A	G	Sox2_MA0143.3	-12	0	+	0	0	.
chr1	107530222	107530223	chr1:107530223:G:A	rs7554812	G	A	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr1	107557111	107557112	chr1:107557112:C:T	rs144458183	C	T	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr1	107650995	107650996	chr1:107650996:T:C	rs7516976	T	C	T	Sox2_MA0143.3	18	0	+	0	0	.
chr1	107739257	107739258	chr1:107739258:T:C	rs12405182	T	C	T	Sox2_MA0143.3	-9	0	+	0	0	.
chr1	107804338	107804339	chr1:107804339:T:C	rs143391394	T	C	T	Sox2_MA0143.3	6	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr1	108015977	108015978	chr1:108015978:A:G	rs1620439	A	G	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr1	108120672	108120673	chr1:108120673:T:C	rs1777450	T	C	T	Sox2_MA0143.3	-6	0	+	0	0	.
chr1	108154601	108154602	chr1:108154602:C:T	rs6703140	C	T	C	Sox2_MA0143.3	17	0	-	0	0	.
chr1	108316608	108316609	chr1:108316609:C:A	rs4970822	C	A	C	Sox2_MA0143.3	18	0	-	0	0	.
chr1	108327535	108327536	chr1:108327536:T:C	rs949905	T	C	T	Sox2_MA0143.3	-5	0	+	0	0	.
chr1	108476756	108476757	chr1:108476757:G:A	rs58859218	G	A	N	Sox2_MA0143.3	-7	0	+	0	0	.
chr1	108532613	108532614	chr1:108532614:G:A	rs12039852	G	A	a	Sox2_MA0143.3	-4	0	-	0	0	.
chr1	108845575	108845576	chr1:108845576:C:A	rs34745004	C	A	A	Sox2_MA0143.3	-6	0	+	0	0	.
chr1	108914628	108914629	chr1:108914629:T:G	rs12126463	T	G	T	Sox2_MA0143.3	10	0	+	0	0	.
chr1	109070843	109070844	chr1:109070844:C:A	rs1562225	C	A	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr1	109177762	109177763	chr1:109177763:C:T	rs17033878	C	T	C	Sox2_MA0143.3	1	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr1	109229997	109229998	chr1:109229998:G:A	rs779094246	G	A	G	Sox2_MA0143.3	12	0	+	0	0	.
chr1	109230006	109230007	chr1:109230007:G:A	rs113539847	G	A	G	Sox2_MA0143.3	21	0	+	0	0	.
chr1	109259305	109259306	chr1:109259306:T:C	rs606434	T	C	C	Sox2_MA0143.3	6	1	+	8.676919043985553	1.7681642646703326	CCATTGTG
chr1	109263187	109263188	chr1:109263188:T:C	rs145491260	T	C	T	Sox2_MA0143.3	2	1	-	8.676919043985553	2.5582713367092715	CCATTGTG
chr1	109398434	109398435	chr1:109398435:C:T	rs144533263	C	T	c	Sox2_MA0143.3	-18	0	+	0	0	.
chr1	109484208	109484209	chr1:109484209:A:C	rs966976206	A	C	A	Sox2_MA0143.3	-1	0	-	0	0	.
chr1	109495086	109495087	chr1:109495087:C:T	rs45448998	C	T	C	Sox2_MA0143.3	20	0	-	0	0	.
chr1	109706553	109706554	chr1:109706554:T:C	rs11579576	T	C	.	Sox2_MA0143.3	17	0	-	0	0	.
chr1	109716739	109716740	chr1:109716740:G:A	rs3768487	G	A	.	Sox2_MA0143.3	-20	0	+	0	0	.
chr1	109718944	109718945	chr1:109718945:G:A	rs11101991	G	A	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr1	109750233	109750234	chr1:109750234:G:C	rs15864	G	C	G	Sox2_MA0143.3	-14	0	+	0	0	.
chr1	109782909	109782910	chr1:109782910:T:C	rs6681343	T	C	T	Sox2_MA0143.3	24	0	+	0	0	.
chr1	109786915	109786916	chr1:109786916:A:G	rs60775830	A	G	G	Sox2_MA0143.3	2	1	-	3.5547341015215945	-2.751084876953981	CCTTTGTA
chr1	109786932	109786933	chr1:109786933:A:G	rs6691948	A	G	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr1	109796661	109796662	chr1:109796662:C:T	rs41425849	C	T	C	Sox2_MA0143.3	16	0	+	0	0	.
chr1	109797064	109797065	chr1:109797065:G:A	rs56742283	G	A	G	Sox2_MA0143.3	16	0	+	0	0	.
chr1	109852479	109852480	chr1:109852480:C:T	rs150991016	C	T	c	Sox2_MA0143.3	5	1	-	9.613475778572903	2.7047209992576837	CCATTGTT
chr1	109852706	109852707	chr1:109852707:C:T	rs116496292	C	T	t	Sox2_MA0143.3	7	1	-	8.676919043985553	3.3675628303222993	CCATTGTG
chr1	109928472	109928473	chr1:109928473:T:C	rs80230220	T	C	T	Sox2_MA0143.3	25	0	+	0	0	.
chr1	109947759	109947760	chr1:109947760:G:A	rs17025227	G	A	G	Sox2_MA0143.3	17	0	-	0	0	.
chr1	109984600	109984601	chr1:109984601:A:G	rs78251135	A	G	A	Sox2_MA0143.3	3	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr1	110029813	110029814	chr1:110029814:T:A	rs112877295	T	A	T	Sox2_MA0143.3	-2	0	-	0	0	.
chr1	110029815	110029816	chr1:110029816:A:T	rs116009215	A	T	A	Sox2_MA0143.3	-4	0	-	0	0	.
chr1	110059559	110059560	chr1:110059560:T:G	rs72976695	T	G	G	Sox2_MA0143.3	-2	0	+	0	0	.
chr1	110162307	110162308	chr1:110162308:T:G	rs17670816	T	G	T	Sox2_MA0143.3	3	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr1	110225438	110225439	chr1:110225439:G:A	rs2761440	G	A	A	Sox2_MA0143.3	-15	0	-	0	0	.
chr1	110330546	110330547	chr1:110330547:T:C	rs12135320	T	C	T	Sox2_MA0143.3	15	0	+	0	0	.
chr1	110421160	110421161	chr1:110421161:G:A	rs6690035	G	A	G	Sox2_MA0143.3	5	1	+	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr1	110452461	110452462	chr1:110452462:G:A	rs66809949	G	A	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr1	110542186	110542187	chr1:110542187:G:A	rs7530454	G	A	A	Sox2_MA0143.3	-14	0	+	0	0	.
chr1	110780738	110780739	chr1:110780739:C:A	rs527288	C	A	C	Sox2_MA0143.3	17	0	+	0	0	.
chr1	111216044	111216045	chr1:111216045:C:T	rs2820078	C	T	C	Sox2_MA0143.3	12	0	-	0	0	.
chr1	111254074	111254075	chr1:111254075:T:C	chr1:111254075:T:C	T	C	T	Sox2_MA0143.3	16	0	-	0	0	.
chr1	111279472	111279473	chr1:111279473:T:C	rs12744824	T	C	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr1	111290631	111290632	chr1:111290632:G:C	rs4554721	G	C	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr1	111302618	111302619	chr1:111302619:T:C	rs35888305	T	C	T	Sox2_MA0143.3	26	0	+	0	0	.
chr1	111303793	111303794	chr1:111303794:T:G	rs12563158	T	G	T	Sox2_MA0143.3	18	0	+	0	0	.
chr1	111384541	111384542	chr1:111384542:A:G	rs7555330	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr1	111447642	111447643	chr1:111447643:T:C	rs2298185	T	C	T	Sox2_MA0143.3	-9	0	+	0	0	.
chr1	111484507	111484508	chr1:111484508:C:G	rs2800898	C	G	G	Sox2_MA0143.3	0	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr1	111489503	111489504	chr1:111489504:T:C	rs58712964	T	C	C	Sox2_MA0143.3	9	0	+	0	0	.
chr1	111489508	111489509	chr1:111489509:T:G	rs61002431	T	G	G	Sox2_MA0143.3	14	0	+	0	0	.
chr1	111499572	111499573	chr1:111499573:T:C	rs1415792	T	C	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr1	111502840	111502841	chr1:111502841:T:A	rs12127443	T	A	T	Sox2_MA0143.3	6	1	+	9.613475778572903	2.7047209992576837	CCATTGTT
chr1	111504497	111504498	chr1:111504498:T:A	rs10776728	T	A	T	Sox2_MA0143.3	4	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr1	111553565	111553566	chr1:111553566:C:T	rs74112330	C	T	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr1	111565205	111565206	chr1:111565206:A:C	rs146026115	A	C	A	Sox2_MA0143.3	7	1	-	9.800647049772198	8.864090315184848	CCTTTGTT
chr1	111565212	111565213	chr1:111565213:G:C	rs4839145	G	C	-	Sox2_MA0143.3	0	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr1	111565212	111565213	chr1:111565213:G:T	chr1:111565213:G:T	G	T	-	Sox2_MA0143.3	0	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr1	111571336	111571337	chr1:111571337:C:A	rs4838917	C	A	C	Sox2_MA0143.3	8	0	+	0	0	.
chr1	111592345	111592346	chr1:111592346:G:T	rs116229532	G	T	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr1	111603352	111603353	chr1:111603353:A:G	rs77788780	A	G	A	Sox2_MA0143.3	6	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr1	111667084	111667085	chr1:111667085:G:A	rs116692473	G	A	G	Sox2_MA0143.3	11	0	-	0	0	.
chr1	111714570	111714571	chr1:111714571:T:C	rs11102325	T	C	T	Sox2_MA0143.3	16	0	+	0	0	.
chr1	111724731	111724732	chr1:111724732:C:T	rs11800513	C	T	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr1	111729405	111729406	chr1:111729406:G:A	rs145645158	G	A	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr1	111740280	111740281	chr1:111740281:C:T	rs197440	C	T	T	Sox2_MA0143.3	-4	0	+	0	0	.
chr1	111744105	111744106	chr1:111744106:T:C	rs139390529	T	C	T	Sox2_MA0143.3	-18	0	+	0	0	.
chr1	111749680	111749681	chr1:111749681:T:C	rs197379	T	C	C	Sox2_MA0143.3	8	0	+	0	0	.
chr1	111749694	111749695	chr1:111749695:C:T	rs1107392	C	T	C	Sox2_MA0143.3	22	0	+	0	0	.
chr1	111804633	111804634	chr1:111804634:G:A	rs672757	G	A	G	Sox2_MA0143.3	18	0	-	0	0	.
chr1	111874855	111874856	chr1:111874856:C:G	rs72692572	C	G	C	Sox2_MA0143.3	11	0	+	0	0	.
chr1	111892695	111892696	chr1:111892696:G:A	rs4838924	G	A	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr1	111921753	111921754	chr1:111921754:C:T	rs17029069	C	T	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr1	111938879	111938880	chr1:111938880:C:G	rs4839188	C	G	G	Sox2_MA0143.3	23	0	-	0	0	.
chr1	111962755	111962756	chr1:111962756:A:G	rs4838932	A	G	A	Sox2_MA0143.3	7	1	+	3.5547341015215945	8.864090315184848	CCTTTGTA
chr1	112146589	112146590	chr1:112146590:G:A	rs72696750	G	A	A	Sox2_MA0143.3	-4	0	-	0	0	.
chr1	112146590	112146591	chr1:112146591:G:A	rs155643	G	A	A	Sox2_MA0143.3	-5	0	-	0	0	.
chr1	112285736	112285737	chr1:112285737:C:A	rs3121989	C	A	c	Sox2_MA0143.3	18	0	+	0	0	.
chr1	112673920	112673921	chr1:112673921:A:G	rs2932538	A	G	G	Sox2_MA0143.3	6	1	-	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr1	112698167	112698168	chr1:112698168:G:T	rs12133583	G	T	G	Sox2_MA0143.3	-12	0	+	0	0	.
chr1	112704707	112704708	chr1:112704708:A:C	chr1:112704708:A:C	A	C	A	Sox2_MA0143.3	3	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr1	112841217	112841218	chr1:112841218:C:A	rs7528133	C	A	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr1	112877947	112877948	chr1:112877948:C:G	rs111495302	C	G	C	Sox2_MA0143.3	0	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr1	112999178	112999179	chr1:112999179:G:A	rs773433	G	A	G	Sox2_MA0143.3	11	0	+	0	0	.
chr1	113031215	113031216	chr1:113031216:G:A	rs17030888	G	A	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr1	113031251	113031252	chr1:113031252:A:T	rs1216772	A	T	A	Sox2_MA0143.3	18	0	+	0	0	.
chr1	113242463	113242464	chr1:113242464:A:G	rs12730687	A	G	A	Sox2_MA0143.3	10	0	+	0	0	.
chr1	113452805	113452806	chr1:113452806:A:G	rs7522365	A	G	A	Sox2_MA0143.3	11	0	-	0	0	.
chr1	113508832	113508833	chr1:113508833:A:T	rs1106209	A	T	T	Sox2_MA0143.3	-19	0	+	0	0	.
chr1	113617627	113617628	chr1:113617628:A:G	chr1:113617628:A:G	A	G	A	Sox2_MA0143.3	-19	0	-	0	0	.
chr1	113780695	113780696	chr1:113780696:T:C	rs3789599	T	C	T	Sox2_MA0143.3	12	0	+	0	0	.
chr1	113871108	113871109	chr1:113871109:C:A	rs17510162	C	A	C	Sox2_MA0143.3	10	0	+	0	0	.
chr1	113881454	113881455	chr1:113881455:G:A	rs2296176	G	A	A	Sox2_MA0143.3	-4	0	-	0	0	.
chr1	113978995	113978996	chr1:113978996:G:T	rs74111913	G	T	T	Sox2_MA0143.3	5	1	+	9.613475778572903	2.7047209992576837	CCATTGTT
chr1	114034629	114034630	chr1:114034630:C:A	rs2938339	C	A	A	Sox2_MA0143.3	17	0	-	0	0	.
chr1	114034972	114034973	chr1:114034973:C:G	rs2938340	C	G	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr1	114074741	114074742	chr1:114074742:G:C	rs12066263	G	C	G	Sox2_MA0143.3	7	1	+	8.864090315184848	9.206767037375712	CCTTTGTG
chr1	114127712	114127713	chr1:114127713:T:G	rs61810280	T	G	T	Sox2_MA0143.3	19	0	-	0	0	.
chr1	114219505	114219506	chr1:114219506:C:G	rs12043994	C	G	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr1	114224064	114224065	chr1:114224065:G:A	rs10776781	G	A	G	Sox2_MA0143.3	5	1	+	9.019595766176417	2.110840986861197	CCATTGTC
chr1	114277012	114277013	chr1:114277013:C:T	rs79621020	C	T	C	Sox2_MA0143.3	20	0	+	0	0	.
chr1	114323842	114323843	chr1:114323843:A:G	rs74113137	A	G	A	Sox2_MA0143.3	12	0	+	0	0	.
chr1	114339861	114339862	chr1:114339862:C:G	rs111819236	C	G	c	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr1	114418727	114418728	chr1:114418728:T:C	rs72696005	T	C	T	Sox2_MA0143.3	25	0	-	0	0	.
chr1	114512046	114512047	chr1:114512047:A:C	rs112639372	A	C	A	Sox2_MA0143.3	-15	0	-	0	0	.
chr1	114808186	114808187	chr1:114808187:C:T	rs61811044	C	T	C	Sox2_MA0143.3	23	0	+	0	0	.
chr1	115012192	115012193	chr1:115012193:T:C	rs6673805	T	C	t	Sox2_MA0143.3	-12	0	-	0	0	.
chr1	115133589	115133590	chr1:115133590:G:A	rs112324893	G	A	G	Sox2_MA0143.3	21	0	+	0	0	.
chr1	115218282	115218283	chr1:115218283:A:G	rs12131229	A	G	A	Sox2_MA0143.3	25	0	-	0	0	.
chr1	115227035	115227036	chr1:115227036:T:C	rs1023468636	T	C	T	Sox2_MA0143.3	-7	0	-	0	0	.
chr1	115302906	115302907	chr1:115302907:C:T	rs7520839	C	T	C	Sox2_MA0143.3	1	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr1	115360123	115360124	chr1:115360124:C:T	rs9651100	C	T	-	Sox2_MA0143.3	-16	0	-	0	0	.
chr1	115364625	115364626	chr1:115364626:C:G	chr1:115364626:C:G	C	G	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr1	115366701	115366702	chr1:115366702:A:G	rs75188212	A	G	G	Sox2_MA0143.3	25	0	-	0	0	.
chr1	115409826	115409827	chr1:115409827:G:A	rs1547182	G	A	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr1	115435980	115435981	chr1:115435981:A:G	rs533408	A	G	G	Sox2_MA0143.3	24	0	-	0	0	.
chr1	115452958	115452959	chr1:115452959:A:G	rs485413	A	G	A	Sox2_MA0143.3	3	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr1	115515350	115515351	chr1:115515351:A:C	rs61797378	A	C	a	Sox2_MA0143.3	-17	0	-	0	0	.
chr1	115515353	115515354	chr1:115515354:G:A	rs141159829	G	A	g	Sox2_MA0143.3	-20	0	-	0	0	.
chr1	115588248	115588249	chr1:115588249:G:T	rs12402092	G	T	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr1	115588299	115588300	chr1:115588300:T:C	rs7534425	T	C	T	Sox2_MA0143.3	10	0	+	0	0	.
chr1	115614033	115614034	chr1:115614034:A:G	rs6672017	A	G	A	Sox2_MA0143.3	-12	0	+	0	0	.
chr1	115785590	115785591	chr1:115785591:C:T	rs36069369	C	T	C	Sox2_MA0143.3	10	0	-	0	0	.
chr1	115829732	115829733	chr1:115829733:C:T	rs36097042	C	T	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr1	115975697	115975698	chr1:115975698:A:G	rs1281693	A	G	G	Sox2_MA0143.3	20	0	-	0	0	.
chr1	116009079	116009080	chr1:116009080:A:G	rs74882339	A	G	A	Sox2_MA0143.3	-18	0	-	0	0	.
chr1	116020841	116020842	chr1:116020842:C:G	rs111313186	C	G	C	Sox2_MA0143.3	7	1	+	9.206767037375712	8.864090315184848	CCTTTGTC
chr1	116129051	116129052	chr1:116129052:C:T	rs1040807	C	T	C	Sox2_MA0143.3	5	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr1	116146106	116146107	chr1:116146107:G:A	rs150831895	G	A	g	Sox2_MA0143.3	13	0	-	0	0	.
chr1	116155190	116155191	chr1:116155191:T:C	rs74548102	T	C	T	Sox2_MA0143.3	-6	0	-	0	0	.
chr1	116182478	116182479	chr1:116182479:A:G	rs57573778	A	G	A	Sox2_MA0143.3	15	0	+	0	0	.
chr1	116220287	116220288	chr1:116220288:C:G	rs12562495	C	G	C	Sox2_MA0143.3	16	0	+	0	0	.
chr1	116220289	116220290	chr1:116220290:A:G	rs7513689	A	G	A	Sox2_MA0143.3	18	0	+	0	0	.
chr1	116226371	116226372	chr1:116226372:A:G	rs12403049	A	G	A	Sox2_MA0143.3	-1	0	-	0	0	.
chr1	116245297	116245298	chr1:116245298:A:G	rs6672581	A	G	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr1	116266827	116266828	chr1:116266828:A:G	rs61786341	A	G	A	Sox2_MA0143.3	6	1	-	9.019595766176417	2.110840986861197	CCATTGTC
chr1	116266954	116266955	chr1:116266955:T:C	rs4839063	T	C	T	Sox2_MA0143.3	21	0	+	0	0	.
chr1	116297722	116297723	chr1:116297723:A:G	rs10754442	A	G	G	Sox2_MA0143.3	3	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr1	116320793	116320794	chr1:116320794:A:G	rs6660103	A	G	G	Sox2_MA0143.3	22	0	-	0	0	.
chr1	116353437	116353438	chr1:116353438:C:T	rs12735411	C	T	C	Sox2_MA0143.3	1	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr1	116378329	116378330	chr1:116378330:G:C	rs850602	G	C	C	Sox2_MA0143.3	9	0	+	0	0	.
chr1	116449284	116449285	chr1:116449285:G:A	rs41439745	G	A	G	Sox2_MA0143.3	20	0	-	0	0	.
chr1	116485386	116485387	chr1:116485387:C:G	rs1032418163	C	G	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr1	116488096	116488097	chr1:116488097:C:G	rs11812016	C	G	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr1	116556720	116556721	chr1:116556721:A:G	rs1034807312	A	G	A	Sox2_MA0143.3	-12	0	-	0	0	.
chr1	116567719	116567720	chr1:116567720:G:C	rs7542681	G	C	G	Sox2_MA0143.3	0	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr1	116594957	116594958	chr1:116594958:G:A	rs55726686	G	A	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr1	116711830	116711831	chr1:116711831:C:A	rs10754327	C	A	C	Sox2_MA0143.3	24	0	+	0	0	.
chr1	116739128	116739129	chr1:116739129:C:G	rs10923140	C	G	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr1	116825327	116825328	chr1:116825328:A:G	rs2767329	A	G	A	Sox2_MA0143.3	2	1	+	9.019595766176417	2.900948058900136	CCATTGTC
chr1	116834066	116834067	chr1:116834067:A:G	rs2767327	A	G	A	Sox2_MA0143.3	2	1	+	9.019595766176417	2.900948058900136	CCATTGTC
chr1	116930080	116930081	chr1:116930081:A:G	rs2806867	A	G	A	Sox2_MA0143.3	-9	0	-	0	0	.
chr1	116934987	116934988	chr1:116934988:G:A	chr1:116934988:G:A	G	A	G	Sox2_MA0143.3	5	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr1	117075444	117075445	chr1:117075445:C:T	rs1289673	C	T	C	Sox2_MA0143.3	22	0	-	0	0	.
chr1	117083340	117083341	chr1:117083341:T:C	rs2764858	T	C	C	Sox2_MA0143.3	19	0	+	0	0	.
chr1	117094537	117094538	chr1:117094538:C:T	rs17036849	C	T	C	Sox2_MA0143.3	17	0	-	0	0	.
chr1	117146343	117146344	chr1:117146344:T:G	rs12565256	T	G	T	Sox2_MA0143.3	3	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr1	117174412	117174413	chr1:117174413:C:T	rs4659161	C	T	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr1	117209102	117209103	chr1:117209103:C:T	rs12046916	C	T	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr1	117377656	117377657	chr1:117377657:C:T	rs55699440	C	T	C	Sox2_MA0143.3	15	0	-	0	0	.
chr1	117516525	117516526	chr1:117516526:C:T	rs6683931	C	T	C	Sox2_MA0143.3	9	0	-	0	0	.
chr1	117578149	117578150	chr1:117578150:G:A	rs74112623	G	A	G	Sox2_MA0143.3	11	0	+	0	0	.
chr1	117610388	117610389	chr1:117610389:A:C	rs11587735	A	C	A	Sox2_MA0143.3	20	0	-	0	0	.
chr1	117614990	117614991	chr1:117614991:C:T	rs1437256	C	T	T	Sox2_MA0143.3	21	0	+	0	0	.
chr1	117672236	117672237	chr1:117672237:T:C	rs7512828	T	C	C	Sox2_MA0143.3	21	0	-	0	0	.
chr1	117734310	117734311	chr1:117734311:C:T	rs114247533	C	T	C	Sox2_MA0143.3	23	0	+	0	0	.
chr1	117812926	117812927	chr1:117812927:C:G	rs851308	C	G	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr1	117819402	117819403	chr1:117819403:C:T	rs7518182	C	T	T	Sox2_MA0143.3	-18	0	+	0	0	.
chr1	117819408	117819409	chr1:117819409:T:C	rs7532389	T	C	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr1	117820985	117820986	chr1:117820986:T:C	rs10754360	T	C	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr1	118253393	118253394	chr1:118253394:C:T	rs143062184	C	T	C	Sox2_MA0143.3	25	0	+	0	0	.
chr1	118298705	118298706	chr1:118298706:C:T	rs4025956	C	T	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr1	118327749	118327750	chr1:118327750:G:A	rs60804050	G	A	G	Sox2_MA0143.3	-3	0	+	0	0	.
chr1	118341751	118341752	chr1:118341752:A:G	rs2474947	A	G	A	Sox2_MA0143.3	3	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr1	118928888	118928889	chr1:118928889:A:T	rs67761335	A	T	A	Sox2_MA0143.3	-2	0	-	0	0	.
chr1	118941192	118941193	chr1:118941193:A:G	rs1325941	A	G	G	Sox2_MA0143.3	19	0	+	0	0	.
chr1	118959114	118959115	chr1:118959115:C:T	rs10802068	C	T	T	Sox2_MA0143.3	12	0	-	0	0	.
chr1	118970289	118970290	chr1:118970290:G:A	rs10923714	G	A	G	Sox2_MA0143.3	21	0	-	0	0	.
chr1	119047796	119047797	chr1:119047797:C:T	rs2645301	C	T	T	Sox2_MA0143.3	23	0	-	0	0	.
chr1	119183000	119183001	chr1:119183001:G:A	rs115466960	G	A	G	Sox2_MA0143.3	12	0	-	0	0	.
chr1	119254586	119254587	chr1:119254587:C:G	rs35171095	C	G	G	Sox2_MA0143.3	5	1	-	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr1	119373535	119373536	chr1:119373536:G:T	rs149827911	G	T	G	Sox2_MA0143.3	27	0	-	0	0	.
chr1	119445589	119445590	chr1:119445590:A:G	rs61732183	A	G	.	Sox2_MA0143.3	6	1	-	9.613475778572903	2.7047209992576837	CCATTGTT
chr1	119541000	119541001	chr1:119541001:T:G	rs5012379	T	G	T	Sox2_MA0143.3	-7	0	-	0	0	.
chr1	119676188	119676189	chr1:119676189:A:T	rs116417363	A	T	A	Sox2_MA0143.3	2	1	-	8.864090315184848	8.676919043985553	CCTTTGTG
chr1	119732978	119732979	chr1:119732979:G:A	rs539304	G	A	G	Sox2_MA0143.3	14	0	+	0	0	.
chr1	119829279	119829280	chr1:119829280:G:A	rs2994817	G	A	g	Sox2_MA0143.3	22	0	+	0	0	.
chr1	119966179	119966180	chr1:119966180:T:C	rs2493410	T	C	C	Sox2_MA0143.3	12	0	-	0	0	.
chr1	119981278	119981279	chr1:119981279:T:C	rs2793831	T	C	T	Sox2_MA0143.3	3	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr1	120176209	120176210	chr1:120176210:G:T	rs587631236	G	T	G	Sox2_MA0143.3	9	0	-	0	0	.
chr1	120179066	120179067	chr1:120179067:C:G	rs115665350	C	G	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr1	120360316	120360317	chr1:120360317:C:T	rs937706	C	T	c	Sox2_MA0143.3	-16	0	-	0	0	.
chr1	120434002	120434003	chr1:120434003:G:A	rs3009751	G	A	g	Sox2_MA0143.3	10	0	-	0	0	.
chr1	120489670	120489671	chr1:120489671:C:G	rs2938625	C	G	g	Sox2_MA0143.3	5	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr1	120851354	120851355	chr1:120851355:C:T	rs1423552232	C	T	c	Sox2_MA0143.3	8	0	+	0	0	.
chr1	120955910	120955911	chr1:120955911:A:G	rs2923186	A	G	a	Sox2_MA0143.3	24	0	+	0	0	.
chr1	121013578	121013579	chr1:121013579:C:T	rs1281718786	C	T	c	Sox2_MA0143.3	-8	0	+	0	0	.
chr1	121234789	121234790	chr1:121234790:T:C	rs587718995	T	C	T	Sox2_MA0143.3	4	1	+	8.864090315184848	1.9553355358696274	CCTTTGTG
chr1	121511709	121511710	chr1:121511710:C:T	rs148918635	C	T	.	Sox2_MA0143.3	-20	0	-	0	0	.
chr1	121586692	121586693	chr1:121586693:C:A	rs28751085	C	A	.	Sox2_MA0143.3	-6	0	-	0	0	.
chr1	121885831	121885832	chr1:121885832:A:T	rs1418514104	A	T	.	Sox2_MA0143.3	17	0	-	0	0	.
chr1	122533553	122533554	chr1:122533554:A:G	rs1300320821	A	G	.	Sox2_MA0143.3	21	0	+	0	0	.
chr1	122630431	122630432	chr1:122630432:C:A	rs1203633871	C	A	.	Sox2_MA0143.3	1	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr1	122865687	122865688	chr1:122865688:T:C	rs1232500994	T	C	.	Sox2_MA0143.3	-15	0	+	0	0	.
chr1	122944841	122944842	chr1:122944842:G:C	rs1206235938	G	C	.	Sox2_MA0143.3	27	0	-	0	0	.
chr1	122955236	122955237	chr1:122955237:G:T	rs1433112536	G	T	.	Sox2_MA0143.3	17	0	+	0	0	.
chr1	123335961	123335962	chr1:123335962:T:C	rs1388140770	T	C	.	Sox2_MA0143.3	23	0	+	0	0	.
chr1	123720181	123720182	chr1:123720182:T:A	rs1269608434	T	A	.	Sox2_MA0143.3	18	0	+	0	0	.
chr1	123799367	123799368	chr1:123799368:C:A	rs1272719556	C	A	.	Sox2_MA0143.3	-2	0	+	0	0	.
chr1	123881882	123881883	chr1:123881883:A:G	rs1342556556	A	G	.	Sox2_MA0143.3	-5	0	+	0	0	.
chr1	123881912	123881913	chr1:123881913:G:T	rs1173973187	G	T	.	Sox2_MA0143.3	25	0	+	0	0	.
chr1	123899210	123899211	chr1:123899211:T:A	rs1269715825	T	A	.	Sox2_MA0143.3	2	1	+	8.864090315184848	8.676919043985553	CCTTTGTG
chr1	124068900	124068901	chr1:124068901:G:C	rs1204578156	G	C	.	Sox2_MA0143.3	16	0	+	0	0	.
chr1	124377236	124377237	chr1:124377237:A:C	chr1:124377237:A:C	A	C	.	Sox2_MA0143.3	-17	0	+	0	0	.
chr1	124397492	124397493	chr1:124397493:C:T	rs1183277176	C	T	.	Sox2_MA0143.3	15	0	+	0	0	.
chr1	124495380	124495381	chr1:124495381:C:A	rs1280687898	C	A	.	Sox2_MA0143.3	15	0	+	0	0	.
chr1	124499436	124499437	chr1:124499437:C:G	rs1263173056	C	G	.	Sox2_MA0143.3	-8	0	+	0	0	.
chr1	124499461	124499462	chr1:124499462:A:T	rs1397875650	A	T	.	Sox2_MA0143.3	17	0	+	0	0	.
chr1	144412192	144412193	chr1:144412193:G:A	rs1457291031	G	A	g	Sox2_MA0143.3	8	0	-	0	0	.
chr1	145846883	145846884	chr1:145846884:A:G	rs2004659	A	G	A	Sox2_MA0143.3	26	0	-	0	0	.
chr1	145917643	145917644	chr1:145917644:G:A	rs79466319	G	A	G	Sox2_MA0143.3	-3	0	-	0	0	.
chr1	145926946	145926947	chr1:145926947:G:T	rs59285351	G	T	T	Sox2_MA0143.3	16	0	+	0	0	.
chr1	145979442	145979443	chr1:145979443:A:G	rs183380213	A	G	A	Sox2_MA0143.3	9	0	+	0	0	.
chr1	146046862	146046863	chr1:146046863:C:T	rs2992020	C	T	.	Sox2_MA0143.3	10	0	+	0	0	.
chr1	146052703	146052704	chr1:146052704:C:T	rs1353692824	C	T	.	Sox2_MA0143.3	9	0	-	0	0	.
chr1	146443248	146443249	chr1:146443249:G:A	rs1274208452	G	A	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr1	146912657	146912658	chr1:146912658:A:G	rs1774463	A	G	G	Sox2_MA0143.3	6	1	-	8.676919043985553	1.7681642646703326	CCATTGTG
chr1	147078364	147078365	chr1:147078365:T:C	rs660096	T	C	.	Sox2_MA0143.3	-5	0	-	0	0	.
chr1	147082078	147082079	chr1:147082079:A:C	rs3011810	A	C	.	Sox2_MA0143.3	14	0	-	0	0	.
chr1	147085525	147085526	chr1:147085526:C:T	rs12752148	C	T	T	Sox2_MA0143.3	5	1	-	9.613475778572903	2.7047209992576837	CCATTGTT
chr1	147117210	147117211	chr1:147117211:G:C	rs56198825	G	C	g	Sox2_MA0143.3	1	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr1	147185663	147185664	chr1:147185664:C:T	rs6690158	C	T	C	Sox2_MA0143.3	8	0	+	0	0	.
chr1	147213553	147213554	chr1:147213554:A:G	rs1530336	A	G	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr1	147388560	147388561	chr1:147388561:C:A	rs116007521	C	A	C	Sox2_MA0143.3	0	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr1	147506138	147506139	chr1:147506139:C:T	rs17160295	C	T	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr1	147511064	147511065	chr1:147511065:C:A	rs7544059	C	A	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr1	147600143	147600144	chr1:147600144:C:T	rs868956011	C	T	-	Sox2_MA0143.3	15	0	-	0	0	.
chr1	147600166	147600167	chr1:147600167:G:A	rs1334656602	G	A	-	Sox2_MA0143.3	-8	0	-	0	0	.
chr1	147676187	147676188	chr1:147676188:T:C	rs10494246	T	C	T	Sox2_MA0143.3	-10	0	+	0	0	.
chr1	147737410	147737411	chr1:147737411:C:T	rs1891504	C	T	C	Sox2_MA0143.3	-20	0	-	0	0	.
chr1	147758108	147758109	chr1:147758109:C:T	rs1692141	C	T	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr1	147760265	147760266	chr1:147760266:T:C	rs6593809	T	C	T	Sox2_MA0143.3	-5	0	+	0	0	.
chr1	147811586	147811587	chr1:147811587:G:A	rs11240130	G	A	G	Sox2_MA0143.3	14	0	-	0	0	.
chr1	147842805	147842806	chr1:147842806:T:G	rs79112096	T	G	G	Sox2_MA0143.3	14	0	-	0	0	.
chr1	147877689	147877690	chr1:147877690:G:A	rs61810422	G	A	G	Sox2_MA0143.3	11	0	-	0	0	.
chr1	148147924	148147925	chr1:148147925:C:A	rs6662787	C	A	.	Sox2_MA0143.3	0	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr1	148346699	148346700	chr1:148346700:A:G	rs2184612	A	G	.	Sox2_MA0143.3	27	0	+	0	0	.
chr1	148522195	148522196	chr1:148522196:G:C	rs1334559980	G	C	g	Sox2_MA0143.3	21	0	-	0	0	.
chr1	148522212	148522213	chr1:148522213:A:G	rs1230130813	A	G	a	Sox2_MA0143.3	4	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr1	148522880	148522881	chr1:148522881:G:A	rs1418405243	G	A	g	Sox2_MA0143.3	-5	0	+	0	0	.
chr1	148919491	148919492	chr1:148919492:T:C	rs570520	T	C	T	Sox2_MA0143.3	-8	0	+	0	0	.
chr1	149636243	149636244	chr1:149636244:G:A	rs1424314549	G	A	g	Sox2_MA0143.3	-5	0	+	0	0	.
chr1	149740672	149740673	chr1:149740673:T:C	rs113255542	T	C	T	Sox2_MA0143.3	2	1	-	9.613475778572903	3.494828071296623	CCATTGTT
chr1	149931716	149931717	chr1:149931717:G:A	rs12078573	G	A	A	Sox2_MA0143.3	24	0	-	0	0	.
chr1	149934519	149934520	chr1:149934520:T:C	rs11205303	T	C	T	Sox2_MA0143.3	-4	0	-	0	0	.
chr1	150067149	150067150	chr1:150067150:C:A	rs3754047	C	A	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr1	150106577	150106578	chr1:150106578:C:T	rs11205327	C	T	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr1	150150548	150150549	chr1:150150549:G:A	rs142468019	G	A	G	Sox2_MA0143.3	25	0	-	0	0	.
chr1	150150552	150150553	chr1:150150553:C:G	rs1174275522	C	G	C	Sox2_MA0143.3	21	0	-	0	0	.
chr1	150255631	150255632	chr1:150255632:T:A	rs6681029	T	A	T	Sox2_MA0143.3	10	0	-	0	0	.
chr1	150261882	150261883	chr1:150261883:T:G	rs3850839	T	G	T	Sox2_MA0143.3	14	0	+	0	0	.
chr1	150479355	150479356	chr1:150479356:G:A	rs35705743	G	A	A	Sox2_MA0143.3	-18	0	+	0	0	.
chr1	150479386	150479387	chr1:150479387:T:C	rs11587575	T	C	T	Sox2_MA0143.3	13	0	+	0	0	.
chr1	150558531	150558532	chr1:150558532:T:C	rs10888382	T	C	T	Sox2_MA0143.3	2	1	-	9.613475778572903	3.494828071296623	CCATTGTT
chr1	150575461	150575462	chr1:150575462:G:A	rs35392872	G	A	.	Sox2_MA0143.3	20	0	-	0	0	.
chr1	150578542	150578543	chr1:150578543:G:A	rs768286504	G	A	G	Sox2_MA0143.3	17	0	+	0	0	.
chr1	150735119	150735120	chr1:150735120:G:A	rs7521898	G	A	G	Sox2_MA0143.3	24	0	-	0	0	.
chr1	150762178	150762179	chr1:150762179:G:A	rs2864869	G	A	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr1	150968240	150968241	chr1:150968241:G:A	rs587602258	G	A	G	Sox2_MA0143.3	20	0	+	0	0	.
chr1	151061346	151061347	chr1:151061347:T:C	rs750334738	T	C	T	Sox2_MA0143.3	27	0	-	0	0	.
chr1	151156851	151156852	chr1:151156852:G:A	rs60636837	G	A	G	Sox2_MA0143.3	10	0	+	0	0	.
chr1	151168736	151168737	chr1:151168737:G:A	rs11577302	G	A	g	Sox2_MA0143.3	27	0	+	0	0	.
chr1	151311859	151311860	chr1:151311860:C:A	rs75361933	C	A	C	Sox2_MA0143.3	22	0	-	0	0	.
chr1	151373999	151374000	chr1:151374000:T:C	rs116147612	T	C	T	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr1	151548254	151548255	chr1:151548255:A:G	rs6587597	A	G	A	Sox2_MA0143.3	2	1	+	9.613475778572903	3.494828071296623	CCATTGTT
chr1	151756279	151756280	chr1:151756280:C:T	rs11204880	C	T	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr1	151829187	151829188	chr1:151829188:T:C	rs951181290	T	C	T	Sox2_MA0143.3	-1	0	+	0	0	.
chr1	151829203	151829204	chr1:151829204:G:A	rs4845604	G	A	G	Sox2_MA0143.3	15	0	+	0	0	.
chr1	151862960	151862961	chr1:151862961:A:C	rs6587626	A	C	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr1	151882679	151882680	chr1:151882680:C:T	rs6587629	C	T	T	Sox2_MA0143.3	18	0	-	0	0	.
chr1	151898533	151898534	chr1:151898534:C:T	rs185352740	C	T	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr1	151936976	151936977	chr1:151936977:A:C	rs6703448	A	C	A	Sox2_MA0143.3	2	1	-	9.206767037375712	2.900948058900136	CCTTTGTC
chr1	152023706	152023707	chr1:152023707:G:A	rs115756830	G	A	G	Sox2_MA0143.3	5	1	+	8.676919043985553	1.7681642646703324	CCATTGTG
chr1	152048681	152048682	chr1:152048682:T:G	rs74611137	T	G	T	Sox2_MA0143.3	12	0	-	0	0	.
chr1	152169610	152169611	chr1:152169611:A:G	rs924088	A	G	A	Sox2_MA0143.3	-4	0	+	0	0	.
chr1	152199148	152199149	chr1:152199149:C:G	rs1552992	C	G	C	Sox2_MA0143.3	21	0	+	0	0	.
chr1	152393165	152393166	chr1:152393166:A:C	chr1:152393166:A:C	A	C	A	Sox2_MA0143.3	-4	0	+	0	0	.
chr1	152393178	152393179	chr1:152393179:A:C	rs11204998	A	C	C	Sox2_MA0143.3	9	0	+	0	0	.
chr1	152399324	152399325	chr1:152399325:G:T	rs12408401	G	T	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr1	152399338	152399339	chr1:152399339:T:G	rs61592477	T	G	T	Sox2_MA0143.3	13	0	+	0	0	.
chr1	152442356	152442357	chr1:152442357:A:T	rs4240878	A	T	A	Sox2_MA0143.3	-4	0	-	0	0	.
chr1	152757739	152757740	chr1:152757740:T:C	rs4845479	T	C	C	Sox2_MA0143.3	6	1	+	9.206767037375712	2.298012258060492	CCTTTGTC
chr1	152763814	152763815	chr1:152763815:C:T	rs4539140	C	T	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr1	152786042	152786043	chr1:152786043:C:T	rs11576947	C	T	T	Sox2_MA0143.3	-10	0	+	0	0	.
chr1	152972751	152972752	chr1:152972752:A:G	rs12032522	A	G	A	Sox2_MA0143.3	-13	0	-	0	0	.
chr1	152982746	152982747	chr1:152982747:G:A	rs7521181	G	A	G	Sox2_MA0143.3	1	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr1	152997863	152997864	chr1:152997864:G:A	rs77585678	G	A	G	Sox2_MA0143.3	18	0	-	0	0	.
chr1	153001586	153001587	chr1:153001587:G:A	rs41263664	G	A	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr1	153030169	153030170	chr1:153030170:T:C	rs3806223	T	C	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr1	153192965	153192966	chr1:153192966:C:A	rs74860764	C	A	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr1	153192973	153192974	chr1:153192974:G:T	rs12140627	G	T	G	Sox2_MA0143.3	-2	0	+	0	0	.
chr1	153244886	153244887	chr1:153244887:A:G	rs11205248	A	G	A	Sox2_MA0143.3	18	0	-	0	0	.
chr1	153254102	153254103	chr1:153254103:G:A	rs6666892	G	A	G	Sox2_MA0143.3	0	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr1	153254110	153254111	chr1:153254111:T:A	rs11585095	T	A	T	Sox2_MA0143.3	-8	0	-	0	0	.
chr1	153255131	153255132	chr1:153255132:A:G	rs2094638	A	G	G	Sox2_MA0143.3	6	1	-	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr1	153307910	153307911	chr1:153307911:G:A	rs9970937	G	A	g	Sox2_MA0143.3	16	0	-	0	0	.
chr1	153348278	153348279	chr1:153348279:C:T	rs2916205	C	T	C	Sox2_MA0143.3	21	0	-	0	0	.
chr1	153351036	153351037	chr1:153351037:A:G	rs112659782	A	G	A	Sox2_MA0143.3	-6	0	-	0	0	.
chr1	153478526	153478527	chr1:153478527:C:T	rs76697909	C	T	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr1	153520565	153520566	chr1:153520566:T:C	rs138067817	T	C	T	Sox2_MA0143.3	-11	0	-	0	0	.
chr1	153533048	153533049	chr1:153533049:A:C	chr1:153533049:A:C	A	C	A	Sox2_MA0143.3	6	1	-	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr1	153535482	153535483	chr1:153535483:G:C	rs659403	G	C	G	Sox2_MA0143.3	1	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr1	153535483	153535484	chr1:153535484:G:C	rs141548428	G	C	G	Sox2_MA0143.3	0	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr1	153545145	153545146	chr1:153545146:G:A	rs960648458	G	A	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr1	153647609	153647610	chr1:153647610:A:G	rs913859	A	G	G	Sox2_MA0143.3	13	0	+	0	0	.
chr1	153670696	153670697	chr1:153670697:G:A	rs139370413	G	A	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr1	153670944	153670945	chr1:153670945:G:A	rs148808005	G	A	G	Sox2_MA0143.3	1	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr1	153670957	153670958	chr1:153670958:A:C	rs778978449	A	C	A	Sox2_MA0143.3	-12	0	-	0	0	.
chr1	153698485	153698486	chr1:153698486:T:C	rs79404550	T	C	T	Sox2_MA0143.3	-4	0	-	0	0	.
chr1	153779588	153779589	chr1:153779589:A:G	rs12067325	A	G	A	Sox2_MA0143.3	-9	0	-	0	0	.
chr1	153793429	153793430	chr1:153793430:G:A	rs1368418583	G	A	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr1	153795131	153795132	chr1:153795132:C:T	rs72633641	C	T	C	Sox2_MA0143.3	19	0	+	0	0	.
chr1	153805371	153805372	chr1:153805372:C:T	rs1139620	C	T	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr1	153967914	153967915	chr1:153967915:A:C	chr1:153967915:A:C	A	C	A	Sox2_MA0143.3	12	0	+	0	0	.
chr1	154148999	154149000	chr1:154149000:C:G	rs2500222	C	G	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr1	154279149	154279150	chr1:154279150:A:G	rs12750321	A	G	A	Sox2_MA0143.3	17	0	-	0	0	.
chr1	154338200	154338201	chr1:154338201:C:A	rs1352333	C	A	A	Sox2_MA0143.3	-9	0	-	0	0	.
chr1	154348465	154348466	chr1:154348466:A:G	rs2297607	A	G	G	Sox2_MA0143.3	16	0	+	0	0	.
chr1	154574690	154574691	chr1:154574691:T:C	rs78794625	T	C	T	Sox2_MA0143.3	25	0	+	0	0	.
chr1	154581880	154581881	chr1:154581881:C:T	rs11264222	C	T	C	Sox2_MA0143.3	19	0	-	0	0	.
chr1	154608742	154608743	chr1:154608743:C:T	rs1250577943	C	T	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr1	154608754	154608755	chr1:154608755:G:C	rs61811388	G	C	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr1	154615192	154615193	chr1:154615193:A:G	rs4845384	A	G	G	Sox2_MA0143.3	2	1	+	9.613475778572903	3.494828071296623	CCATTGTT
chr1	154619724	154619725	chr1:154619725:T:C	rs9426829	T	C	T	Sox2_MA0143.3	18	0	-	0	0	.
chr1	154622213	154622214	chr1:154622214:A:G	rs9426830	A	G	A	Sox2_MA0143.3	11	0	-	0	0	.
chr1	154666224	154666225	chr1:154666225:T:G	rs141614666	T	G	T	Sox2_MA0143.3	-11	0	+	0	0	.
chr1	154720527	154720528	chr1:154720528:T:C	rs77510509	T	C	T	Sox2_MA0143.3	13	0	+	0	0	.
chr1	154741529	154741530	chr1:154741530:G:A	rs4999127	G	A	A	Sox2_MA0143.3	10	0	+	0	0	.
chr1	154744674	154744675	chr1:154744675:A:G	rs11577391	A	G	A	Sox2_MA0143.3	18	0	+	0	0	.
chr1	154745304	154745305	chr1:154745305:C:T	rs12406164	C	T	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr1	154749701	154749702	chr1:154749702:G:A	rs7530704	G	A	A	Sox2_MA0143.3	26	0	-	0	0	.
chr1	154751915	154751916	chr1:154751916:T:C	rs906276	T	C	C	Sox2_MA0143.3	-20	0	-	0	0	.
chr1	154772375	154772376	chr1:154772376:A:G	rs1131820	A	G	A	Sox2_MA0143.3	2	1	+	9.019595766176417	2.900948058900136	CCATTGTC
chr1	154860037	154860038	chr1:154860038:A:T	rs116349504	A	T	A	Sox2_MA0143.3	6	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr1	154877294	154877295	chr1:154877295:G:A	rs12069356	G	A	A	Sox2_MA0143.3	-4	0	-	0	0	.
chr1	154897002	154897003	chr1:154897003:C:T	rs141295130	C	T	C	Sox2_MA0143.3	16	0	-	0	0	.
chr1	154987588	154987589	chr1:154987589:G:A	rs113906979	G	A	g	Sox2_MA0143.3	-1	0	+	0	0	.
chr1	155001234	155001235	chr1:155001235:T:C	rs540870162	T	C	T	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr1	155050468	155050469	chr1:155050469:C:T	rs977716342	C	T	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr1	155050480	155050481	chr1:155050481:G:A	rs554144261	G	A	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr1	155052097	155052098	chr1:155052098:A:C	chr1:155052098:A:C	A	C	A	Sox2_MA0143.3	-20	0	+	0	0	.
chr1	155052130	155052131	chr1:155052131:G:T	rs369628208	G	T	G	Sox2_MA0143.3	13	0	+	0	0	.
chr1	155063134	155063135	chr1:155063135:C:T	rs3806256	C	T	C	Sox2_MA0143.3	11	0	-	0	0	.
chr1	155064043	155064044	chr1:155064044:G:A	rs552327718	G	A	G	Sox2_MA0143.3	-9	0	+	0	0	.
chr1	155064060	155064061	chr1:155064061:T:A	rs564154038	T	A	T	Sox2_MA0143.3	8	0	+	0	0	.
chr1	155095056	155095057	chr1:155095057:G:A	rs58925616	G	A	G	Sox2_MA0143.3	13	0	+	0	0	.
chr1	155095066	155095067	chr1:155095067:A:G	chr1:155095067:A:G	A	G	A	Sox2_MA0143.3	23	0	+	0	0	.
chr1	155120330	155120331	chr1:155120331:A:G	rs11264326	A	G	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr1	155176876	155176877	chr1:155176877:T:C	rs200844064	T	C	T	Sox2_MA0143.3	-17	0	+	0	0	.
chr1	155196401	155196402	chr1:155196402:G:A	rs74890861	G	A	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr1	155226965	155226966	chr1:155226966:C:G	rs148125247	C	G	C	Sox2_MA0143.3	0	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr1	155278783	155278784	chr1:155278784:G:A	rs7549276	G	A	G	Sox2_MA0143.3	20	0	+	0	0	.
chr1	155648753	155648754	chr1:155648754:C:T	rs144163778	C	T	C	Sox2_MA0143.3	5	1	-	9.613475778572903	2.7047209992576837	CCATTGTT
chr1	155698908	155698909	chr1:155698909:G:A	rs71628683	G	A	g	Sox2_MA0143.3	12	0	+	0	0	.
chr1	155882812	155882813	chr1:155882813:C:T	rs17379666	C	T	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr1	155910781	155910782	chr1:155910782:C:G	rs493446	C	G	G	Sox2_MA0143.3	24	0	+	0	0	.
chr1	156004179	156004180	chr1:156004180:G:A	rs2886070	G	A	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr1	156054170	156054171	chr1:156054171:G:A	rs1175493800	G	A	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr1	156124786	156124787	chr1:156124787:A:G	rs2993267	A	G	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr1	156126306	156126307	chr1:156126307:C:A	rs1030150761	C	A	C	Sox2_MA0143.3	16	0	+	0	0	.
chr1	156130257	156130258	chr1:156130258:C:A	rs509551	C	A	C	Sox2_MA0143.3	27	0	-	0	0	.
chr1	156178280	156178281	chr1:156178281:C:A	chr1:156178281:C:A	C	A	C	Sox2_MA0143.3	20	0	-	0	0	.
chr1	156189425	156189426	chr1:156189426:G:A	rs2842864	G	A	A	Sox2_MA0143.3	-6	0	-	0	0	.
chr1	156301534	156301535	chr1:156301535:C:T	rs60418539	C	T	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr1	156400022	156400023	chr1:156400023:G:A	rs11264482	G	A	G	Sox2_MA0143.3	18	0	+	0	0	.
chr1	156476657	156476658	chr1:156476658:C:T	rs12131289	C	T	T	Sox2_MA0143.3	-14	0	-	0	0	.
chr1	156478468	156478469	chr1:156478469:T:C	rs4453029	T	C	C	Sox2_MA0143.3	2	1	-	9.019595766176417	2.900948058900136	CCATTGTC
chr1	156491914	156491915	chr1:156491915:A:T	rs3790459	A	T	A	Sox2_MA0143.3	-3	0	+	0	0	.
chr1	156503507	156503508	chr1:156503508:T:A	rs76291582	T	A	T	Sox2_MA0143.3	12	0	-	0	0	.
chr1	156520181	156520182	chr1:156520182:G:A	rs1778830	G	A	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr1	156555230	156555231	chr1:156555231:T:C	rs12760461	T	C	T	Sox2_MA0143.3	18	0	+	0	0	.
chr1	156658203	156658204	chr1:156658204:T:C	rs2298135	T	C	T	Sox2_MA0143.3	15	0	-	0	0	.
chr1	156662049	156662050	chr1:156662050:C:T	rs890036378	C	T	C	Sox2_MA0143.3	0	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr1	156694190	156694191	chr1:156694191:C:T	rs10752617	C	T	T	Sox2_MA0143.3	16	0	-	0	0	.
chr1	156748385	156748386	chr1:156748386:C:T	rs145354463	C	T	C	Sox2_MA0143.3	1	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr1	156748408	156748409	chr1:156748409:A:G	rs9426941	A	G	G	Sox2_MA0143.3	24	0	+	0	0	.
chr1	156757932	156757933	chr1:156757933:A:G	chr1:156757933:A:G	A	G	-	Sox2_MA0143.3	-14	0	+	0	0	.
chr1	156804716	156804717	chr1:156804717:A:G	chr1:156804717:A:G	A	G	A	Sox2_MA0143.3	2	1	-	9.800647049772198	3.494828071296623	CCTTTGTT
chr1	156823339	156823340	chr1:156823340:G:C	rs7517728	G	C	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr1	156823786	156823787	chr1:156823787:T:C	rs72698637	T	C	T	Sox2_MA0143.3	-13	0	+	0	0	.
chr1	156856781	156856782	chr1:156856782:G:T	rs11264574	G	T	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr1	156931760	156931761	chr1:156931761:G:C	rs703157	G	C	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr1	157104815	157104816	chr1:157104816:A:G	rs61799679	A	G	A	Sox2_MA0143.3	-11	0	-	0	0	.
chr1	157113749	157113750	chr1:157113750:C:T	rs16838099	C	T	C	Sox2_MA0143.3	18	0	-	0	0	.
chr1	157134677	157134678	chr1:157134678:C:G	rs6704373	C	G	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr1	157273208	157273209	chr1:157273209:A:G	rs1338689	A	G	-	Sox2_MA0143.3	4	1	-	8.676919043985553	1.7681642646703322	CCATTGTG
chr1	157273813	157273814	chr1:157273814:C:T	rs2147446	C	T	-	Sox2_MA0143.3	-13	0	+	0	0	.
chr1	157286838	157286839	chr1:157286839:G:T	rs6702965	G	T	g	Sox2_MA0143.3	-17	0	+	0	0	.
chr1	157410437	157410438	chr1:157410438:C:T	rs115023510	C	T	c	Sox2_MA0143.3	10	0	+	0	0	.
chr1	157504836	157504837	chr1:157504837:G:A	rs11585674	G	A	G	Sox2_MA0143.3	12	0	+	0	0	.
chr1	157524315	157524316	chr1:157524316:C:T	rs34273689	C	T	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr1	157542900	157542901	chr1:157542901:G:A	rs115306426	G	A	G	Sox2_MA0143.3	-2	0	+	0	0	.
chr1	157588166	157588167	chr1:157588167:T:C	rs11799853	T	C	C	Sox2_MA0143.3	26	0	-	0	0	.
chr1	157625828	157625829	chr1:157625829:T:A	rs12083478	T	A	T	Sox2_MA0143.3	2	1	+	3.5547341015215945	3.3675628303222993	CCTTTGTA
chr1	157625853	157625854	chr1:157625854:A:G	rs2777983	A	G	G	Sox2_MA0143.3	27	0	+	0	0	.
chr1	157625972	157625973	chr1:157625973:G:T	rs2758641	G	T	G	Sox2_MA0143.3	10	0	+	0	0	.
chr1	157895122	157895123	chr1:157895123:A:G	rs7524550	A	G	A	Sox2_MA0143.3	12	0	+	0	0	.
chr1	158043868	158043869	chr1:158043869:A:G	rs4246542	A	G	A	Sox2_MA0143.3	-18	0	-	0	0	.
chr1	158075973	158075974	chr1:158075974:G:A	rs7365258	G	A	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr1	158124232	158124233	chr1:158124233:C:T	rs115016157	C	T	C	Sox2_MA0143.3	18	0	+	0	0	.
chr1	158197476	158197477	chr1:158197477:C:T	rs35554638	C	T	.	Sox2_MA0143.3	14	0	+	0	0	.
chr1	158198874	158198875	chr1:158198875:G:C	rs670766	G	C	.	Sox2_MA0143.3	23	0	+	0	0	.
chr1	158203173	158203174	chr1:158203174:G:A	rs1633135	G	A	.	Sox2_MA0143.3	-9	0	-	0	0	.
chr1	158398750	158398751	chr1:158398751:A:G	rs34465440	A	G	G	Sox2_MA0143.3	6	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr1	158401035	158401036	chr1:158401036:G:A	rs34961797	G	A	G	Sox2_MA0143.3	20	0	+	0	0	.
chr1	158420710	158420711	chr1:158420711:G:A	rs34616883	G	A	G	Sox2_MA0143.3	13	0	-	0	0	.
chr1	158434810	158434811	chr1:158434811:C:T	rs75730783	C	T	C	Sox2_MA0143.3	13	0	-	0	0	.
chr1	158509835	158509836	chr1:158509836:C:A	rs115856238	C	A	C	Sox2_MA0143.3	5	1	-	9.019595766176417	2.110840986861197	CCATTGTC
chr1	158607318	158607319	chr1:158607319:A:C	rs857685	A	C	A	Sox2_MA0143.3	21	0	+	0	0	.
chr1	158675971	158675972	chr1:158675972:A:G	rs7526842	A	G	A	Sox2_MA0143.3	13	0	-	0	0	.
chr1	158864738	158864739	chr1:158864739:G:A	rs55703423	G	A	G	Sox2_MA0143.3	-14	0	+	0	0	.
chr1	158906612	158906613	chr1:158906613:G:A	rs2852686	G	A	A	Sox2_MA0143.3	8	0	-	0	0	.
chr1	159013802	159013803	chr1:159013803:C:G	rs856066	C	G	C	Sox2_MA0143.3	14	0	-	0	0	.
chr1	159013808	159013809	chr1:159013809:G:A	rs856067	G	A	A	Sox2_MA0143.3	8	0	-	0	0	.
chr1	159013815	159013816	chr1:159013816:G:A	rs7526724	G	A	A	Sox2_MA0143.3	1	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr1	159056549	159056550	chr1:159056550:C:T	rs79431460	C	T	C	Sox2_MA0143.3	8	0	+	0	0	.
chr1	159230229	159230230	chr1:159230230:G:T	rs863013	G	T	G	Sox2_MA0143.3	20	0	-	0	0	.
chr1	159437936	159437937	chr1:159437937:A:T	rs11589514	A	T	A	Sox2_MA0143.3	-13	0	+	0	0	.
chr1	159443669	159443670	chr1:159443670:C:T	rs4261112	C	T	C	Sox2_MA0143.3	12	0	-	0	0	.
chr1	159493229	159493230	chr1:159493230:C:G	rs10159061	C	G	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr1	159509884	159509885	chr1:159509885:T:C	rs75030591	T	C	T	Sox2_MA0143.3	-14	0	+	0	0	.
chr1	159557287	159557288	chr1:159557288:G:A	rs73028801	G	A	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr1	159601176	159601177	chr1:159601177:C:T	rs7541411	C	T	C	Sox2_MA0143.3	23	0	-	0	0	.
chr1	159601210	159601211	chr1:159601211:T:C	rs116185606	T	C	T	Sox2_MA0143.3	-11	0	-	0	0	.
chr1	159612613	159612614	chr1:159612614:A:T	rs16842402	A	T	a	Sox2_MA0143.3	24	0	-	0	0	.
chr1	159670978	159670979	chr1:159670979:G:C	rs12743815	G	C	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr1	159730018	159730019	chr1:159730019:C:G	chr1:159730019:C:G	C	G	C	Sox2_MA0143.3	16	0	-	0	0	.
chr1	159752303	159752304	chr1:159752304:A:G	rs139996812	A	G	A	Sox2_MA0143.3	-7	0	-	0	0	.
chr1	159792329	159792330	chr1:159792330:A:G	rs16842662	A	G	A	Sox2_MA0143.3	-15	0	-	0	0	.
chr1	159829404	159829405	chr1:159829405:C:A	rs78779199	C	A	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr1	159830474	159830475	chr1:159830475:C:T	rs539426775	C	T	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr1	159849700	159849701	chr1:159849701:T:C	rs4133290	T	C	T	Sox2_MA0143.3	-1	0	-	0	0	.
chr1	159855173	159855174	chr1:159855174:A:G	rs112824339	A	G	A	Sox2_MA0143.3	-5	0	+	0	0	.
chr1	159855176	159855177	chr1:159855177:G:C	rs2501340	G	C	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr1	159861615	159861616	chr1:159861616:G:A	rs4074846	G	A	G	Sox2_MA0143.3	12	0	-	0	0	.
chr1	159882529	159882530	chr1:159882530:C:T	rs6656176	C	T	T	Sox2_MA0143.3	-3	0	+	0	0	.
chr1	159941442	159941443	chr1:159941443:G:A	rs181682620	G	A	G	Sox2_MA0143.3	22	0	-	0	0	.
chr1	160046612	160046613	chr1:160046613:G:A	rs543128572	G	A	G	Sox2_MA0143.3	-11	0	+	0	0	.
chr1	160092681	160092682	chr1:160092682:C:T	rs2295622	C	T	C	Sox2_MA0143.3	27	0	-	0	0	.
chr1	160125834	160125835	chr1:160125835:A:G	rs16831388	A	G	A	Sox2_MA0143.3	6	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr1	160137797	160137798	chr1:160137798:G:A	rs10494336	G	A	C	Sox2_MA0143.3	-20	0	-	0	0	.
chr1	160171660	160171661	chr1:160171661:G:A	rs7528360	G	A	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr1	160210801	160210802	chr1:160210802:G:A	rs74123301	G	A	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr1	160211718	160211719	chr1:160211719:G:A	rs8192602	G	A	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr1	160261840	160261841	chr1:160261841:A:G	rs578186624	A	G	A	Sox2_MA0143.3	20	0	-	0	0	.
chr1	160353063	160353064	chr1:160353064:G:A	rs10158574	G	A	G	Sox2_MA0143.3	25	0	+	0	0	.
chr1	160376805	160376806	chr1:160376806:C:T	rs187532893	C	T	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr1	160389720	160389721	chr1:160389721:T:C	rs34037404	T	C	t	Sox2_MA0143.3	-2	0	+	0	0	.
chr1	160395404	160395405	chr1:160395405:C:T	rs6677086	C	T	t	Sox2_MA0143.3	-9	0	-	0	0	.
chr1	160400789	160400790	chr1:160400790:C:G	rs1374883988	C	G	C	Sox2_MA0143.3	26	0	-	0	0	.
chr1	160542825	160542826	chr1:160542826:G:A	rs10737176	G	A	g	Sox2_MA0143.3	8	0	+	0	0	.
chr1	160550733	160550734	chr1:160550734:C:T	rs754715671	C	T	c	Sox2_MA0143.3	16	0	-	0	0	.
chr1	160550744	160550745	chr1:160550745:C:A	chr1:160550745:C:A	C	A	c	Sox2_MA0143.3	5	1	-	9.019595766176417	2.110840986861197	CCATTGTC
chr1	160559267	160559268	chr1:160559268:C:G	rs72708832	C	G	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr1	160629861	160629862	chr1:160629862:C:G	rs3753383	C	G	C	Sox2_MA0143.3	16	0	+	0	0	.
chr1	160630571	160630572	chr1:160630572:G:C	rs6672314	G	C	G	Sox2_MA0143.3	-11	0	+	0	0	.
chr1	160671963	160671964	chr1:160671964:G:A	rs35860180	G	A	G	Sox2_MA0143.3	22	0	-	0	0	.
chr1	160681563	160681564	chr1:160681564:T:C	rs931540161	T	C	T	Sox2_MA0143.3	-18	0	-	0	0	.
chr1	160714744	160714745	chr1:160714745:A:C	rs352689	A	C	C	Sox2_MA0143.3	2	1	-	9.206767037375712	2.900948058900136	CCTTTGTC
chr1	160714759	160714760	chr1:160714760:T:G	rs352690	T	G	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr1	160771508	160771509	chr1:160771509:C:T	rs2176873	C	T	c	Sox2_MA0143.3	-16	0	-	0	0	.
chr1	160779412	160779413	chr1:160779413:T:C	rs563781	T	C	t	Sox2_MA0143.3	4	1	+	3.5547341015215945	-3.3540206777936254	CCTTTGTA
chr1	160779414	160779415	chr1:160779415:T:C	rs2090755	T	C	t	Sox2_MA0143.3	6	1	+	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr1	160851017	160851018	chr1:160851018:C:A	rs528106	C	A	A	Sox2_MA0143.3	-5	0	-	0	0	.
chr1	160869162	160869163	chr1:160869163:A:G	rs4017459	A	G	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr1	160949380	160949381	chr1:160949381:G:A	rs11265536	G	A	.	Sox2_MA0143.3	14	0	+	0	0	.
chr1	160957936	160957937	chr1:160957937:T:G	rs1999248	T	G	G	Sox2_MA0143.3	-3	0	-	0	0	.
chr1	161019153	161019154	chr1:161019154:G:A	rs12401336	G	A	G	Sox2_MA0143.3	1	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr1	161021050	161021051	chr1:161021051:T:C	rs751052203	T	C	T	Sox2_MA0143.3	-10	0	+	0	0	.
chr1	161021084	161021085	chr1:161021085:T:C	rs28365980	T	C	T	Sox2_MA0143.3	24	0	+	0	0	.
chr1	161045748	161045749	chr1:161045749:G:C	rs2774278	G	C	G	Sox2_MA0143.3	0	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr1	161159772	161159773	chr1:161159773:G:A	rs540465468	G	A	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr1	161194088	161194089	chr1:161194089:G:A	rs115956210	G	A	G	Sox2_MA0143.3	20	0	-	0	0	.
chr1	161260982	161260983	chr1:161260983:A:G	rs150752639	A	G	a	Sox2_MA0143.3	-16	0	-	0	0	.
chr1	161291451	161291452	chr1:161291452:G:T	rs76072566	G	T	G	Sox2_MA0143.3	27	0	+	0	0	.
chr1	161428005	161428006	chr1:161428006:T:C	rs116891904	T	C	T	Sox2_MA0143.3	27	0	+	0	0	.
chr1	161428071	161428072	chr1:161428072:T:C	rs115676919	T	C	T	Sox2_MA0143.3	-18	0	-	0	0	.
chr1	161494621	161494622	chr1:161494622:C:T	rs6684851	C	T	C	Sox2_MA0143.3	18	0	+	0	0	.
chr1	161548966	161548967	chr1:161548967:T:C	rs12128686	T	C	T	Sox2_MA0143.3	12	0	+	0	0	.
chr1	161551140	161551141	chr1:161551141:C:T	rs56199187	C	T	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr1	161558273	161558274	chr1:161558274:T:G	rs75417510	T	G	T	Sox2_MA0143.3	4	1	+	9.800647049772198	2.8918922704569785	CCTTTGTT
chr1	161605358	161605359	chr1:161605359:T:C	rs61802301	T	C	T	Sox2_MA0143.3	-1	0	+	0	0	.
chr1	161620558	161620559	chr1:161620559:C:T	rs34566209	C	T	C	Sox2_MA0143.3	16	0	-	0	0	.
chr1	161623168	161623169	chr1:161623169:A:G	rs61803001	A	G	A	Sox2_MA0143.3	13	0	-	0	0	.
chr1	161630318	161630319	chr1:161630319:C:T	rs149686267	C	T	C	Sox2_MA0143.3	7	1	+	9.019595766176417	9.613475778572903	CCATTGTC
chr1	161630953	161630954	chr1:161630954:C:T	rs74127076	C	T	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr1	161710467	161710468	chr1:161710468:G:A	rs6427618	G	A	G	Sox2_MA0143.3	25	0	+	0	0	.
chr1	161713345	161713346	chr1:161713346:G:A	rs11746	G	A	G	Sox2_MA0143.3	20	0	-	0	0	.
chr1	161718722	161718723	chr1:161718723:T:C	rs557681182	T	C	T	Sox2_MA0143.3	2	1	+	9.800647049772198	3.494828071296623	CCTTTGTT
chr1	161771483	161771484	chr1:161771484:T:C	rs905594	T	C	T	Sox2_MA0143.3	-3	0	+	0	0	.
chr1	161919164	161919165	chr1:161919165:T:C	rs4417044	T	C	t	Sox2_MA0143.3	19	0	+	0	0	.
chr1	161966820	161966821	chr1:161966821:A:G	rs114995835	A	G	A	Sox2_MA0143.3	19	0	-	0	0	.
chr1	161973094	161973095	chr1:161973095:G:A	rs12076482	G	A	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr1	162055201	162055202	chr1:162055202:C:T	rs192633150	C	T	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr1	162067368	162067369	chr1:162067369:A:G	rs6702936	A	G	A	Sox2_MA0143.3	-11	0	+	0	0	.
chr1	162092096	162092097	chr1:162092097:G:A	rs35899595	G	A	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr1	162108159	162108160	chr1:162108160:G:C	rs6684732	G	C	G	Sox2_MA0143.3	16	0	-	0	0	.
chr1	162139606	162139607	chr1:162139607:T:C	rs7534045	T	C	C	Sox2_MA0143.3	3	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr1	162214219	162214220	chr1:162214220:T:G	rs549190965	T	G	T	Sox2_MA0143.3	-12	0	+	0	0	.
chr1	162354476	162354477	chr1:162354477:G:A	rs4657186	G	A	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr1	162497435	162497436	chr1:162497436:A:T	rs180742938	A	T	A	Sox2_MA0143.3	9	0	-	0	0	.
chr1	162615732	162615733	chr1:162615733:A:G	rs12117031	A	G	A	Sox2_MA0143.3	27	0	-	0	0	.
chr1	162661103	162661104	chr1:162661104:C:T	rs10917583	C	T	C	Sox2_MA0143.3	7	1	-	8.864090315184848	3.5547341015215945	CCTTTGTG
chr1	162912244	162912245	chr1:162912245:T:G	rs80032848	T	G	T	Sox2_MA0143.3	25	0	+	0	0	.
chr1	162918075	162918076	chr1:162918076:A:C	rs35977677	A	C	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr1	163258143	163258144	chr1:163258144:C:A	rs116332261	C	A	C	Sox2_MA0143.3	1	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr1	163271786	163271787	chr1:163271787:G:A	rs61812168	G	A	A	Sox2_MA0143.3	21	0	+	0	0	.
chr1	163347391	163347392	chr1:163347392:C:G	rs2292273	C	G	C	Sox2_MA0143.3	12	0	+	0	0	.
chr1	163373598	163373599	chr1:163373599:C:G	rs12722859	C	G	C	Sox2_MA0143.3	8	0	+	0	0	.
chr1	163416795	163416796	chr1:163416796:C:A	rs12127231	C	A	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr1	163539611	163539612	chr1:163539612:G:A	rs954753026	G	A	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr1	163545622	163545623	chr1:163545623:T:A	rs6690556	T	A	t	Sox2_MA0143.3	-1	0	-	0	0	.
chr1	163574430	163574431	chr1:163574431:C:A	rs867262310	C	A	C	Sox2_MA0143.3	8	0	+	0	0	.
chr1	163581224	163581225	chr1:163581225:G:A	rs1934532	G	A	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr1	163730662	163730663	chr1:163730663:C:A	rs78936580	C	A	C	Sox2_MA0143.3	19	0	+	0	0	.
chr1	163824417	163824418	chr1:163824418:C:T	rs60623547	C	T	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr1	164061114	164061115	chr1:164061115:C:T	rs10917895	C	T	C	Sox2_MA0143.3	8	0	-	0	0	.
chr1	164446344	164446345	chr1:164446345:A:G	rs12074121	A	G	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr1	164511115	164511116	chr1:164511116:A:T	rs114529195	A	T	A	Sox2_MA0143.3	7	1	-	9.800647049772198	3.5547341015215945	CCTTTGTT
chr1	164592142	164592143	chr1:164592143:C:T	rs12739548	C	T	T	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr1	164592885	164592886	chr1:164592886:C:G	rs71519263	C	G	C	Sox2_MA0143.3	14	0	-	0	0	.
chr1	164598408	164598409	chr1:164598409:G:A	rs7535186	G	A	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr1	164664428	164664429	chr1:164664429:G:A	rs57608380	G	A	G	Sox2_MA0143.3	7	1	+	8.864090315184848	3.5547341015215945	CCTTTGTG
chr1	164700147	164700148	chr1:164700148:G:A	rs146251267	G	A	G	Sox2_MA0143.3	9	0	+	0	0	.
chr1	164720524	164720525	chr1:164720525:G:A	rs1387389	G	A	A	Sox2_MA0143.3	-3	0	-	0	0	.
chr1	164733316	164733317	chr1:164733317:A:G	rs1780330	A	G	G	Sox2_MA0143.3	20	0	-	0	0	.
chr1	164749120	164749121	chr1:164749121:C:T	rs2050745	C	T	T	Sox2_MA0143.3	13	0	-	0	0	.
chr1	164772057	164772058	chr1:164772058:T:A	rs12084358	T	A	A	Sox2_MA0143.3	10	0	+	0	0	.
chr1	164895703	164895704	chr1:164895704:G:A	rs2488912	G	A	g	Sox2_MA0143.3	-12	0	-	0	0	.
chr1	164900631	164900632	chr1:164900632:A:G	rs12735006	A	G	A	Sox2_MA0143.3	-7	0	-	0	0	.
chr1	164910199	164910200	chr1:164910200:T:C	rs1936076	T	C	C	Sox2_MA0143.3	18	0	+	0	0	.
chr1	164983206	164983207	chr1:164983207:G:A	rs34698224	G	A	G	Sox2_MA0143.3	5	1	+	9.206767037375712	2.298012258060492	CCTTTGTC
chr1	165226576	165226577	chr1:165226577:T:C	rs142639649	T	C	T	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr1	165276022	165276023	chr1:165276023:T:C	rs569000978	T	C	T	Sox2_MA0143.3	-20	0	-	0	0	.
chr1	165288412	165288413	chr1:165288413:G:A	rs16842092	G	A	G	Sox2_MA0143.3	19	0	+	0	0	.
chr1	165383786	165383787	chr1:165383787:A:G	rs1501492	A	G	G	Sox2_MA0143.3	16	0	+	0	0	.
chr1	165441547	165441548	chr1:165441548:A:G	rs2194899	A	G	A	Sox2_MA0143.3	9	0	-	0	0	.
chr1	165445695	165445696	chr1:165445696:C:T	rs1467664	C	T	T	Sox2_MA0143.3	-18	0	-	0	0	.
chr1	165446669	165446670	chr1:165446670:T:C	rs116392685	T	C	T	Sox2_MA0143.3	-12	0	-	0	0	.
chr1	165449248	165449249	chr1:165449249:T:C	rs1887098	T	C	T	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr1	165456242	165456243	chr1:165456243:A:G	rs2194900	A	G	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr1	165456243	165456244	chr1:165456244:C:G	rs285427	C	G	G	Sox2_MA0143.3	-14	0	+	0	0	.
chr1	165539441	165539442	chr1:165539442:G:C	rs72693821	G	C	G	Sox2_MA0143.3	21	0	+	0	0	.
chr1	165539447	165539448	chr1:165539448:A:G	rs2459240	A	G	G	Sox2_MA0143.3	27	0	+	0	0	.
chr1	165616468	165616469	chr1:165616469:A:G	rs3930290	A	G	A	Sox2_MA0143.3	3	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr1	165634649	165634650	chr1:165634650:G:A	rs9333389	G	A	A	Sox2_MA0143.3	8	0	+	0	0	.
chr1	165634656	165634657	chr1:165634657:C:T	rs1538114	C	T	T	Sox2_MA0143.3	15	0	+	0	0	.
chr1	165737669	165737670	chr1:165737670:A:G	rs72699921	A	G	A	Sox2_MA0143.3	-6	0	-	0	0	.
chr1	165828728	165828729	chr1:165828729:C:A	rs2814472	C	A	A	Sox2_MA0143.3	13	0	+	0	0	.
chr1	165844482	165844483	chr1:165844483:C:G	rs6684773	C	G	C	Sox2_MA0143.3	1	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr1	165851319	165851320	chr1:165851320:C:T	rs565561368	C	T	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr1	165897308	165897309	chr1:165897309:G:A	rs908371015	G	A	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr1	165930743	165930744	chr1:165930744:T:G	rs1663839	T	G	T	Sox2_MA0143.3	7	1	+	9.800647049772198	8.864090315184848	CCTTTGTT
chr1	165930748	165930749	chr1:165930749:T:C	rs1663838	T	C	C	Sox2_MA0143.3	12	0	+	0	0	.
chr1	166026549	166026550	chr1:166026550:C:T	rs35774572	C	T	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr1	166026574	166026575	chr1:166026575:G:A	rs6657291	G	A	G	Sox2_MA0143.3	12	0	+	0	0	.
chr1	166040095	166040096	chr1:166040096:G:A	rs17456933	G	A	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr1	166040566	166040567	chr1:166040567:C:G	rs79062114	C	G	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr1	166040605	166040606	chr1:166040606:T:G	rs12137660	T	G	T	Sox2_MA0143.3	24	0	+	0	0	.
chr1	166044900	166044901	chr1:166044901:C:G	rs141794129	C	G	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr1	166084977	166084978	chr1:166084978:T:G	rs12078862	T	G	T	Sox2_MA0143.3	6	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr1	166170720	166170721	chr1:166170721:C:G	rs12117883	C	G	C	Sox2_MA0143.3	16	0	+	0	0	.
chr1	166352800	166352801	chr1:166352801:C:T	rs11587733	C	T	C	Sox2_MA0143.3	16	0	-	0	0	.
chr1	166354724	166354725	chr1:166354725:C:G	rs4311866	C	G	C	Sox2_MA0143.3	1	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr1	166467369	166467370	chr1:166467370:C:G	rs977514	C	G	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr1	166638225	166638226	chr1:166638226:C:T	rs491814	C	T	C	Sox2_MA0143.3	13	0	-	0	0	.
chr1	166797812	166797813	chr1:166797813:G:A	rs858800	G	A	A	Sox2_MA0143.3	-1	0	-	0	0	.
chr1	166839696	166839697	chr1:166839697:C:A	rs966681486	C	A	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr1	166877521	166877522	chr1:166877522:C:T	rs34381372	C	T	T	Sox2_MA0143.3	23	0	-	0	0	.
chr1	166925715	166925716	chr1:166925716:G:A	rs36110323	G	A	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr1	167033848	167033849	chr1:167033849:T:G	rs7542075	T	G	T	Sox2_MA0143.3	26	0	-	0	0	.
chr1	167094414	167094415	chr1:167094415:C:A	rs35678279	C	A	C	Sox2_MA0143.3	11	0	-	0	0	.
chr1	167135512	167135513	chr1:167135513:G:C	rs76051712	G	C	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr1	167161336	167161337	chr1:167161337:G:T	rs114399484	G	T	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr1	167163498	167163499	chr1:167163499:T:G	rs34758860	T	G	t	Sox2_MA0143.3	-1	0	+	0	0	.
chr1	167220291	167220292	chr1:167220292:C:T	rs750933126	C	T	C	Sox2_MA0143.3	0	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr1	167220303	167220304	chr1:167220304:A:G	rs138832602	A	G	A	Sox2_MA0143.3	12	0	+	0	0	.
chr1	167312909	167312910	chr1:167312910:G:A	rs2146727	G	A	A	Sox2_MA0143.3	13	0	+	0	0	.
chr1	167356295	167356296	chr1:167356296:T:C	rs2140763	T	C	C	Sox2_MA0143.3	11	0	-	0	0	.
chr1	167453361	167453362	chr1:167453362:G:A	rs114473227	G	A	G	Sox2_MA0143.3	-11	0	+	0	0	.
chr1	167457824	167457825	chr1:167457825:C:T	rs17348881	C	T	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr1	167528498	167528499	chr1:167528499:A:G	rs12724833	A	G	A	Sox2_MA0143.3	-7	0	+	0	0	.
chr1	167544856	167544857	chr1:167544857:C:T	chr1:167544857:C:T	C	T	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr1	167637659	167637660	chr1:167637660:T:G	rs1229391	T	G	G	Sox2_MA0143.3	6	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr1	167682749	167682750	chr1:167682750:G:T	rs6655987	G	T	G	Sox2_MA0143.3	5	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr1	167697953	167697954	chr1:167697954:A:G	rs73035732	A	G	A	Sox2_MA0143.3	6	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr1	167727821	167727822	chr1:167727822:C:A	rs12566176	C	A	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr1	167762272	167762273	chr1:167762273:G:A	rs55968444	G	A	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr1	167817355	167817356	chr1:167817356:C:T	rs1450259958	C	T	C	Sox2_MA0143.3	-5	0	-	0	0	.
chr1	167819957	167819958	chr1:167819958:G:C	rs72697795	G	C	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr1	167854921	167854922	chr1:167854922:T:A	rs12030162	T	A	T	Sox2_MA0143.3	15	0	+	0	0	.
chr1	167854925	167854926	chr1:167854926:C:T	rs9787065	C	T	T	Sox2_MA0143.3	19	0	+	0	0	.
chr1	167883141	167883142	chr1:167883142:A:T	rs12754863	A	T	A	Sox2_MA0143.3	2	1	+	9.019595766176417	9.206767037375712	CCATTGTC
chr1	167892750	167892751	chr1:167892751:C:A	rs80124755	C	A	C	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr1	167977436	167977437	chr1:167977437:T:C	rs138821548	T	C	T	Sox2_MA0143.3	12	0	+	0	0	.
chr1	167996474	167996475	chr1:167996475:C:G	rs143327343	C	G	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr1	168004737	168004738	chr1:168004738:C:T	rs1060041	C	T	C	Sox2_MA0143.3	12	0	-	0	0	.
chr1	168137223	168137224	chr1:168137224:C:A	rs141351696	C	A	C	Sox2_MA0143.3	27	0	+	0	0	.
chr1	168142375	168142376	chr1:168142376:A:G	rs61809597	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr1	168225663	168225664	chr1:168225664:G:C	rs12137008	G	C	G	Sox2_MA0143.3	-12	0	+	0	0	.
chr1	168225688	168225689	chr1:168225689:C:T	rs4656572	C	T	C	Sox2_MA0143.3	13	0	+	0	0	.
chr1	168410366	168410367	chr1:168410367:G:T	rs76548834	G	T	T	Sox2_MA0143.3	25	0	-	0	0	.
chr1	168435996	168435997	chr1:168435997:A:C	rs1407956	A	C	C	Sox2_MA0143.3	25	0	-	0	0	.
chr1	168436849	168436850	chr1:168436850:C:T	rs74939653	C	T	C	Sox2_MA0143.3	1	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr1	168488339	168488340	chr1:168488340:A:G	rs1023917775	A	G	A	Sox2_MA0143.3	-1	0	+	0	0	.
chr1	168488360	168488361	chr1:168488361:T:C	rs76979145	T	C	T	Sox2_MA0143.3	20	0	+	0	0	.
chr1	168640791	168640792	chr1:168640792:C:T	rs742482	C	T	T	Sox2_MA0143.3	15	0	-	0	0	.
chr1	168685092	168685093	chr1:168685093:G:A	rs1415678	G	A	G	Sox2_MA0143.3	20	0	-	0	0	.
chr1	168694159	168694160	chr1:168694160:T:C	rs17561899	T	C	.	Sox2_MA0143.3	27	0	-	0	0	.
chr1	168694190	168694191	chr1:168694191:C:T	rs71632375	C	T	.	Sox2_MA0143.3	-4	0	-	0	0	.
chr1	168728969	168728970	chr1:168728970:A:T	rs143980534	A	T	A	Sox2_MA0143.3	14	0	+	0	0	.
chr1	168864044	168864045	chr1:168864045:C:T	rs77343099	C	T	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr1	168864057	168864058	chr1:168864058:G:A	rs77442922	G	A	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr1	168919346	168919347	chr1:168919347:A:G	rs12128029	A	G	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr1	169101284	169101285	chr1:169101285:C:A	rs2051146	C	A	A	Sox2_MA0143.3	7	1	-	8.676919043985553	9.613475778572903	CCATTGTG
chr1	169105497	169105498	chr1:169105498:G:C	rs1534984	G	C	G	Sox2_MA0143.3	-16	0	-	0	0	.
chr1	169106180	169106181	chr1:169106181:G:A	rs566843994	G	A	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr1	169106210	169106211	chr1:169106211:T:C	rs28362573	T	C	T	Sox2_MA0143.3	26	0	+	0	0	.
chr1	169146778	169146779	chr1:169146779:T:C	rs12082618	T	C	T	Sox2_MA0143.3	-20	0	-	0	0	.
chr1	169146870	169146871	chr1:169146871:A:G	rs4656653	A	G	g	Sox2_MA0143.3	3	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr1	169193231	169193232	chr1:169193232:C:T	rs12045202	C	T	C	Sox2_MA0143.3	19	0	-	0	0	.
chr1	169236998	169236999	chr1:169236999:C:T	rs34651513	C	T	C	Sox2_MA0143.3	19	0	-	0	0	.
chr1	169288185	169288186	chr1:169288186:T:C	rs10800424	T	C	C	Sox2_MA0143.3	6	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr1	169341044	169341045	chr1:169341045:G:A	rs9628661	G	A	g	Sox2_MA0143.3	23	0	-	0	0	.
chr1	169341044	169341045	chr1:169341045:G:T	chr1:169341045:G:T	G	T	g	Sox2_MA0143.3	23	0	-	0	0	.
chr1	169551754	169551755	chr1:169551755:A:T	rs2298909	A	T	T	Sox2_MA0143.3	17	0	+	0	0	.
chr1	169595881	169595882	chr1:169595882:G:T	rs372239466	G	T	G	Sox2_MA0143.3	-16	0	-	0	0	.
chr1	169605485	169605486	chr1:169605486:T:G	rs2205893	T	G	T	Sox2_MA0143.3	-11	0	-	0	0	.
chr1	169605490	169605491	chr1:169605491:G:T	rs3917761	G	T	G	Sox2_MA0143.3	-16	0	-	0	0	.
chr1	169610514	169610515	chr1:169610515:G:A	rs2235304	G	A	G	Sox2_MA0143.3	14	0	-	0	0	.
chr1	169630398	169630399	chr1:169630399:A:C	rs742124	A	C	A	Sox2_MA0143.3	-16	0	-	0	0	.
chr1	169650726	169650727	chr1:169650727:A:G	rs11804644	A	G	G	Sox2_MA0143.3	-5	0	+	0	0	.
chr1	169693299	169693300	chr1:169693300:A:G	rs4987404	A	G	A	Sox2_MA0143.3	-16	0	-	0	0	.
chr1	169836407	169836408	chr1:169836408:T:C	rs12119635	T	C	T	Sox2_MA0143.3	-3	0	+	0	0	.
chr1	169859185	169859186	chr1:169859186:G:A	rs17602701	G	A	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr1	169882580	169882581	chr1:169882581:G:T	rs143013434	G	T	g	Sox2_MA0143.3	-17	0	+	0	0	.
chr1	170067661	170067662	chr1:170067662:A:C	rs74585450	A	C	g	Sox2_MA0143.3	-16	0	+	0	0	.
chr1	170147100	170147101	chr1:170147101:T:C	rs6703198	T	C	T	Sox2_MA0143.3	15	0	+	0	0	.
chr1	170197969	170197970	chr1:170197970:C:G	rs12048441	C	G	C	Sox2_MA0143.3	12	0	-	0	0	.
chr1	170229152	170229153	chr1:170229153:T:G	rs4575136	T	G	T	Sox2_MA0143.3	2	1	+	9.206767037375712	2.900948058900136	CCTTTGTC
chr1	170233514	170233515	chr1:170233515:C:A	rs1412793	C	A	A	Sox2_MA0143.3	1	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr1	170375379	170375380	chr1:170375380:C:G	rs2151250	C	G	C	Sox2_MA0143.3	23	0	+	0	0	.
chr1	170471480	170471481	chr1:170471481:C:T	rs11577004	C	T	C	Sox2_MA0143.3	24	0	+	0	0	.
chr1	170634980	170634981	chr1:170634981:T:C	rs598993	T	C	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr1	170635020	170635021	chr1:170635021:C:T	rs891945741	C	T	C	Sox2_MA0143.3	25	0	+	0	0	.
chr1	170663242	170663243	chr1:170663243:A:G	rs56250774	A	G	A	Sox2_MA0143.3	6	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr1	170668559	170668560	chr1:170668560:G:A	chr1:170668560:G:A	G	A	G	Sox2_MA0143.3	9	0	-	0	0	.
chr1	170835987	170835988	chr1:170835988:G:C	rs6686567	G	C	C	Sox2_MA0143.3	5	1	+	9.019595766176417	2.110840986861197	CCATTGTC
chr1	170986528	170986529	chr1:170986529:C:T	rs16863907	C	T	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr1	171088058	171088059	chr1:171088059:T:C	rs72637246	T	C	T	Sox2_MA0143.3	-5	0	+	0	0	.
chr1	171160282	171160283	chr1:171160283:T:C	rs1920150	T	C	T	Sox2_MA0143.3	14	0	-	0	0	.
chr1	171160297	171160298	chr1:171160298:C:T	rs151091235	C	T	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr1	171210639	171210640	chr1:171210640:A:G	rs73032526	A	G	G	Sox2_MA0143.3	-3	0	-	0	0	.
chr1	171220203	171220204	chr1:171220204:C:T	chr1:171220204:C:T	C	T	C	Sox2_MA0143.3	22	0	-	0	0	.
chr1	171220207	171220208	chr1:171220208:A:G	rs76161101	A	G	A	Sox2_MA0143.3	18	0	-	0	0	.
chr1	171482481	171482482	chr1:171482482:C:T	rs35041900	C	T	c	Sox2_MA0143.3	-1	0	-	0	0	.
chr1	171531014	171531015	chr1:171531015:C:T	rs7534557	C	T	C	Sox2_MA0143.3	13	0	-	0	0	.
chr1	171654692	171654693	chr1:171654693:C:A	rs2075537	C	A	A	Sox2_MA0143.3	7	1	+	9.019595766176417	3.3675628303222993	CCATTGTC
chr1	171654700	171654701	chr1:171654701:A:G	rs77145826	A	G	A	Sox2_MA0143.3	15	0	+	0	0	.
chr1	171877932	171877933	chr1:171877933:T:C	rs944401693	T	C	T	Sox2_MA0143.3	2	1	+	8.864090315184848	2.5582713367092715	CCTTTGTG
chr1	171899147	171899148	chr1:171899148:C:A	rs12123946	C	A	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr1	171899182	171899183	chr1:171899183:C:T	rs909715591	C	T	C	Sox2_MA0143.3	19	0	+	0	0	.
chr1	172071698	172071699	chr1:172071699:G:A	rs80055675	G	A	G	Sox2_MA0143.3	1	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr1	172071707	172071708	chr1:172071708:A:G	rs78875415	A	G	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr1	172118880	172118881	chr1:172118881:A:G	rs16843860	A	G	a	Sox2_MA0143.3	17	0	-	0	0	.
chr1	172167993	172167994	chr1:172167994:A:T	rs17277127	A	T	A	Sox2_MA0143.3	16	0	-	0	0	.
chr1	172185471	172185472	chr1:172185472:G:T	rs4141906	G	T	G	Sox2_MA0143.3	12	0	+	0	0	.
chr1	172236885	172236886	chr1:172236886:G:A	rs4916245	G	A	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr1	172447719	172447720	chr1:172447720:C:T	rs7515895	C	T	T	Sox2_MA0143.3	-14	0	-	0	0	.
chr1	172450770	172450771	chr1:172450771:T:C	rs149010909	T	C	T	Sox2_MA0143.3	19	0	-	0	0	.
chr1	172531866	172531867	chr1:172531867:A:G	rs4500357	A	G	A	Sox2_MA0143.3	-16	0	+	0	0	.
chr1	172827645	172827646	chr1:172827646:A:G	rs6684969	A	G	a	Sox2_MA0143.3	23	0	+	0	0	.
chr1	172835981	172835982	chr1:172835982:A:G	rs12058182	A	G	G	Sox2_MA0143.3	20	0	-	0	0	.
chr1	172871551	172871552	chr1:172871552:G:A	rs150988651	G	A	G	Sox2_MA0143.3	14	0	+	0	0	.
chr1	172893960	172893961	chr1:172893961:G:T	rs6699678	G	T	G	Sox2_MA0143.3	8	0	+	0	0	.
chr1	172933225	172933226	chr1:172933226:G:A	rs16845148	G	A	g	Sox2_MA0143.3	-2	0	-	0	0	.
chr1	172934440	172934441	chr1:172934441:A:G	rs113641128	A	G	A	Sox2_MA0143.3	-5	0	-	0	0	.
chr1	172948747	172948748	chr1:172948748:G:A	rs74125824	G	A	G	Sox2_MA0143.3	12	0	-	0	0	.
chr1	172957158	172957159	chr1:172957159:C:T	rs7539951	C	T	C	Sox2_MA0143.3	5	1	-	9.613475778572903	2.7047209992576837	CCATTGTT
chr1	173042786	173042787	chr1:173042787:A:G	chr1:173042787:A:G	A	G	A	Sox2_MA0143.3	10	0	+	0	0	.
chr1	173202701	173202702	chr1:173202702:A:T	rs74126364	A	T	A	Sox2_MA0143.3	-14	0	+	0	0	.
chr1	173202716	173202717	chr1:173202717:C:T	rs13376667	C	T	C	Sox2_MA0143.3	1	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr1	173206692	173206693	chr1:173206693:A:G	rs3850641	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr1	173222335	173222336	chr1:173222336:G:T	rs2205960	G	T	G	Sox2_MA0143.3	17	0	-	0	0	.
chr1	173267508	173267509	chr1:173267509:T:C	rs2022034	T	C	T	Sox2_MA0143.3	13	0	+	0	0	.
chr1	173350581	173350582	chr1:173350582:G:C	rs2027500	G	C	G	Sox2_MA0143.3	18	0	-	0	0	.
chr1	173410590	173410591	chr1:173410591:C:T	rs4328106	C	T	T	Sox2_MA0143.3	-19	0	-	0	0	.
chr1	173415687	173415688	chr1:173415688:T:C	rs4916354	T	C	T	Sox2_MA0143.3	23	0	-	0	0	.
chr1	173429487	173429488	chr1:173429488:C:T	rs6695932	C	T	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr1	173429510	173429511	chr1:173429511:G:C	rs140245512	G	C	G	Sox2_MA0143.3	20	0	+	0	0	.
chr1	173475696	173475697	chr1:173475697:C:T	rs4354572	C	T	T	Sox2_MA0143.3	24	0	-	0	0	.
chr1	173531103	173531104	chr1:173531104:A:G	rs10912634	A	G	A	Sox2_MA0143.3	-3	0	-	0	0	.
chr1	173578519	173578520	chr1:173578520:A:G	rs56273514	A	G	A	Sox2_MA0143.3	17	0	-	0	0	.
chr1	173670626	173670627	chr1:173670627:C:A	rs73033131	C	A	C	Sox2_MA0143.3	0	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr1	173862962	173862963	chr1:173862963:G:A	rs9660185	G	A	G	Sox2_MA0143.3	20	0	-	0	0	.
chr1	173862979	173862980	chr1:173862980:A:G	rs79243836	A	G	A	Sox2_MA0143.3	3	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr1	173865634	173865635	chr1:173865635:C:T	rs780451525	C	T	C	Sox2_MA0143.3	0	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr1	173867898	173867899	chr1:173867899:C:T	rs143149970	C	T	C	Sox2_MA0143.3	15	0	-	0	0	.
chr1	173867912	173867913	chr1:173867913:G:A	rs75315904	G	A	G	Sox2_MA0143.3	1	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr1	173868167	173868168	chr1:173868168:T:C	rs55829688	T	C	T	Sox2_MA0143.3	6	1	+	8.676919043985553	1.7681642646703326	CCATTGTG
chr1	173934598	173934599	chr1:173934599:G:A	rs767053	G	A	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr1	174007875	174007876	chr1:174007876:T:G	rs6665880	T	G	T	Sox2_MA0143.3	18	0	+	0	0	.
chr1	174099230	174099231	chr1:174099231:C:T	rs28831202	C	T	C	Sox2_MA0143.3	9	0	+	0	0	.
chr1	174408222	174408223	chr1:174408223:A:C	rs11810824	A	C	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr1	174626521	174626522	chr1:174626522:A:G	rs75306743	A	G	A	Sox2_MA0143.3	-10	0	+	0	0	.
chr1	174666556	174666557	chr1:174666557:A:G	rs333423	A	G	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr1	174805992	174805993	chr1:174805993:A:G	rs913687	A	G	A	Sox2_MA0143.3	19	0	+	0	0	.
chr1	174837406	174837407	chr1:174837407:G:A	rs78849928	G	A	A	Sox2_MA0143.3	16	0	+	0	0	.
chr1	175126799	175126800	chr1:175126800:C:T	rs7515770	C	T	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr1	175163149	175163150	chr1:175163150:C:T	rs115312924	C	T	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr1	175368660	175368661	chr1:175368661:C:T	rs2236884	C	T	C	Sox2_MA0143.3	8	0	-	0	0	.
chr1	175396961	175396962	chr1:175396962:A:C	rs2301430	A	C	A	Sox2_MA0143.3	11	0	+	0	0	.
chr1	175454249	175454250	chr1:175454250:C:T	rs860906	C	T	T	Sox2_MA0143.3	20	0	+	0	0	.
chr1	175536588	175536589	chr1:175536589:G:T	rs116385178	G	T	T	Sox2_MA0143.3	18	0	+	0	0	.
chr1	175683026	175683027	chr1:175683027:G:T	rs34476724	G	T	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr1	175689394	175689395	chr1:175689395:G:A	rs12404663	G	A	A	Sox2_MA0143.3	15	0	+	0	0	.
chr1	175788682	175788683	chr1:175788683:A:G	rs1359589	A	G	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr1	175788692	175788693	chr1:175788693:T:C	rs538303386	T	C	T	Sox2_MA0143.3	-5	0	+	0	0	.
chr1	175861796	175861797	chr1:175861797:G:A	rs16849262	G	A	G	Sox2_MA0143.3	12	0	-	0	0	.
chr1	175861828	175861829	chr1:175861829:T:A	rs7543556	T	A	T	Sox2_MA0143.3	-20	0	-	0	0	.
chr1	175868536	175868537	chr1:175868537:A:C	rs4652135	A	C	A	Sox2_MA0143.3	13	0	-	0	0	.
chr1	176030976	176030977	chr1:176030977:T:C	rs12040241	T	C	T	Sox2_MA0143.3	-20	0	-	0	0	.
chr1	176195728	176195729	chr1:176195729:T:C	rs12755507	T	C	T	Sox2_MA0143.3	3	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr1	176515645	176515646	chr1:176515646:C:G	rs75340945	C	G	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr1	176550430	176550431	chr1:176550431:G:T	rs4140474	G	T	T	Sox2_MA0143.3	12	0	+	0	0	.
chr1	176593659	176593660	chr1:176593660:G:A	rs1395460	G	A	A	Sox2_MA0143.3	-17	0	+	0	0	.
chr1	176735441	176735442	chr1:176735442:C:T	rs12128792	C	T	C	Sox2_MA0143.3	10	0	-	0	0	.
chr1	176800221	176800222	chr1:176800222:T:C	rs10913256	T	C	T	Sox2_MA0143.3	-20	0	+	0	0	.
chr1	176820959	176820960	chr1:176820960:C:T	rs12138739	C	T	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr1	176905179	176905180	chr1:176905180:A:G	rs10442615	A	G	A	Sox2_MA0143.3	-10	0	-	0	0	.
chr1	176905946	176905947	chr1:176905947:G:A	rs11585886	G	A	G	Sox2_MA0143.3	12	0	-	0	0	.
chr1	176906167	176906168	chr1:176906168:T:C	rs10442617	T	C	C	Sox2_MA0143.3	13	0	-	0	0	.
chr1	177089064	177089065	chr1:177089065:T:C	rs227530	T	C	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr1	177322774	177322775	chr1:177322775:T:C	rs2142752	T	C	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr1	177338516	177338517	chr1:177338517:T:A	rs6425418	T	A	A	Sox2_MA0143.3	24	0	+	0	0	.
chr1	177375698	177375699	chr1:177375699:C:G	rs12028782	C	G	C	Sox2_MA0143.3	1	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr1	177451775	177451776	chr1:177451776:G:A	rs72726737	G	A	A	Sox2_MA0143.3	21	0	+	0	0	.
chr1	177741678	177741679	chr1:177741679:A:G	rs2065141	A	G	A	Sox2_MA0143.3	-14	0	-	0	0	.
chr1	177937521	177937522	chr1:177937522:G:A	rs6676302	G	A	A	Sox2_MA0143.3	11	0	-	0	0	.
chr1	177958518	177958519	chr1:177958519:C:A	rs16828589	C	A	C	Sox2_MA0143.3	26	0	+	0	0	.
chr1	177966208	177966209	chr1:177966209:T:C	rs41267160	T	C	T	Sox2_MA0143.3	25	0	+	0	0	.
chr1	178489572	178489573	chr1:178489573:G:T	rs1008495	G	T	T	Sox2_MA0143.3	8	0	-	0	0	.
chr1	178573889	178573890	chr1:178573890:C:G	rs2493862	C	G	C	Sox2_MA0143.3	0	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr1	178612956	178612957	chr1:178612957:G:A	rs13375207	G	A	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr1	178724624	178724625	chr1:178724625:A:T	rs114816473	A	T	A	Sox2_MA0143.3	-4	0	-	0	0	.
chr1	178867835	178867836	chr1:178867836:T:C	rs3753535	T	C	T	Sox2_MA0143.3	-4	0	-	0	0	.
chr1	179207262	179207263	chr1:179207263:G:A	rs2171958	G	A	A	Sox2_MA0143.3	10	0	+	0	0	.
chr1	179230516	179230517	chr1:179230517:A:G	rs2636266	A	G	A	Sox2_MA0143.3	-10	0	-	0	0	.
chr1	179544979	179544980	chr1:179544980:T:C	rs11585517	T	C	T	Sox2_MA0143.3	24	0	+	0	0	.
chr1	179637021	179637022	chr1:179637022:T:C	rs10494522	T	C	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr1	179747445	179747446	chr1:179747446:G:C	rs2454196	G	C	G	Sox2_MA0143.3	20	0	-	0	0	.
chr1	179816519	179816520	chr1:179816520:C:T	rs74704757	C	T	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr1	179951876	179951877	chr1:179951877:C:G	rs77184773	C	G	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr1	179968863	179968864	chr1:179968864:A:T	rs73040001	A	T	A	Sox2_MA0143.3	27	0	+	0	0	.
chr1	180155498	180155499	chr1:180155499:C:T	rs34430949	C	T	C	Sox2_MA0143.3	16	0	+	0	0	.
chr1	180169178	180169179	chr1:180169179:A:G	rs12067207	A	G	A	Sox2_MA0143.3	3	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr1	180169182	180169183	chr1:180169183:C:T	rs3820308	C	T	T	Sox2_MA0143.3	-1	0	-	0	0	.
chr1	180173646	180173647	chr1:180173647:G:T	rs61826661	G	T	G	Sox2_MA0143.3	18	0	+	0	0	.
chr1	180173928	180173929	chr1:180173929:T:C	rs3767183	T	C	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr1	180382404	180382405	chr1:180382405:A:G	rs4634864	A	G	A	Sox2_MA0143.3	-4	0	-	0	0	.
chr1	180530566	180530567	chr1:180530567:A:G	rs74132932	A	G	A	Sox2_MA0143.3	-12	0	+	0	0	.
chr1	180536840	180536841	chr1:180536841:C:G	rs150777772	C	G	T	Sox2_MA0143.3	-14	0	-	0	0	.
chr1	180544125	180544126	chr1:180544126:G:C	rs1045595966	G	C	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr1	180586764	180586765	chr1:180586765:C:T	rs35251764	C	T	C	Sox2_MA0143.3	14	0	+	0	0	.
chr1	180632810	180632811	chr1:180632811:A:G	chr1:180632811:A:G	A	G	A	Sox2_MA0143.3	4	1	-	9.206767037375712	2.2980122580604916	CCTTTGTC
chr1	180710665	180710666	chr1:180710666:C:T	rs11585424	C	T	-	Sox2_MA0143.3	-11	0	+	0	0	.
chr1	180773477	180773478	chr1:180773478:A:G	rs150431507	A	G	a	Sox2_MA0143.3	27	0	-	0	0	.
chr1	180776040	180776041	chr1:180776041:C:T	rs11585295	C	T	C	Sox2_MA0143.3	10	0	-	0	0	.
chr1	180864528	180864529	chr1:180864529:G:A	rs3856060	G	A	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr1	180918240	180918241	chr1:180918241:T:C	rs13374657	T	C	T	Sox2_MA0143.3	-17	0	+	0	0	.
chr1	180925717	180925718	chr1:180925718:T:C	rs1446207154	T	C	T	Sox2_MA0143.3	4	1	+	9.206767037375712	2.2980122580604916	CCTTTGTC
chr1	180956283	180956284	chr1:180956284:C:T	rs533701252	C	T	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr1	180988620	180988621	chr1:180988621:A:G	rs115308330	A	G	A	Sox2_MA0143.3	18	0	-	0	0	.
chr1	181022170	181022171	chr1:181022171:A:G	rs6700216	A	G	G	Sox2_MA0143.3	26	0	-	0	0	.
chr1	181032799	181032800	chr1:181032800:A:G	rs79851843	A	G	A	Sox2_MA0143.3	2	1	+	9.019595766176417	2.900948058900136	CCATTGTC
chr1	181141969	181141970	chr1:181141970:T:C	rs11578088	T	C	T	Sox2_MA0143.3	-13	0	+	0	0	.
chr1	181161257	181161258	chr1:181161258:T:G	rs73044273	T	G	T	Sox2_MA0143.3	2	1	-	9.019595766176417	2.900948058900136	CCATTGTC
chr1	181166261	181166262	chr1:181166262:C:T	rs75708994	C	T	C	Sox2_MA0143.3	1	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr1	181177519	181177520	chr1:181177520:A:G	rs7537032	A	G	G	Sox2_MA0143.3	25	0	-	0	0	.
chr1	181191040	181191041	chr1:181191041:C:A	rs61746380	C	A	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr1	181248950	181248951	chr1:181248951:G:A	rs116240709	G	A	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr1	181248997	181248998	chr1:181248998:G:A	rs4102468	G	A	G	Sox2_MA0143.3	25	0	-	0	0	.
chr1	181335688	181335689	chr1:181335689:T:A	rs145985983	T	A	T	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr1	181410035	181410036	chr1:181410036:C:T	rs73046122	C	T	C	Sox2_MA0143.3	19	0	+	0	0	.
chr1	181477353	181477354	chr1:181477354:T:C	rs4652656	T	C	T	Sox2_MA0143.3	3	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr1	181532469	181532470	chr1:181532470:A:G	rs506947	A	G	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr1	181554378	181554379	chr1:181554379:G:C	rs2877684	G	C	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr1	181631821	181631822	chr1:181631822:T:G	rs75318603	T	G	T	Sox2_MA0143.3	-16	0	+	0	0	.
chr1	181680936	181680937	chr1:181680937:T:C	rs3753738	T	C	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr1	182091335	182091336	chr1:182091336:C:T	rs16858526	C	T	C	Sox2_MA0143.3	27	0	-	0	0	.
chr1	182128713	182128714	chr1:182128714:C:T	rs7526699	C	T	C	Sox2_MA0143.3	18	0	-	0	0	.
chr1	182207220	182207221	chr1:182207221:A:T	rs78783304	A	T	T	Sox2_MA0143.3	-14	0	+	0	0	.
chr1	182289737	182289738	chr1:182289738:G:A	rs10911047	G	A	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr1	182348068	182348069	chr1:182348069:G:A	rs77156554	G	A	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr1	182416876	182416877	chr1:182416877:A:G	rs267856	A	G	G	Sox2_MA0143.3	3	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr1	182583330	182583331	chr1:182583331:C:T	rs72725073	C	T	C	Sox2_MA0143.3	26	0	+	0	0	.
chr1	182590374	182590375	chr1:182590375:C:T	rs682585	C	T	C	Sox2_MA0143.3	13	0	+	0	0	.
chr1	182606535	182606536	chr1:182606536:G:A	rs3754289	G	A	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr1	182631115	182631116	chr1:182631116:G:C	rs628103	G	C	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr1	182802424	182802425	chr1:182802425:G:A	rs116666840	G	A	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr1	182996503	182996504	chr1:182996504:C:T	rs73045704	C	T	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr1	183073395	183073396	chr1:183073396:G:A	rs12120747	G	A	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr1	183075935	183075936	chr1:183075936:T:C	rs73051768	T	C	T	Sox2_MA0143.3	-1	0	+	0	0	.
chr1	183094000	183094001	chr1:183094001:A:G	rs10911241	A	G	A	Sox2_MA0143.3	9	0	+	0	0	.
chr1	183096499	183096500	chr1:183096500:C:T	rs12094586	C	T	C	Sox2_MA0143.3	24	0	-	0	0	.
chr1	183139815	183139816	chr1:183139816:T:C	rs1041979967	T	C	T	Sox2_MA0143.3	7	1	+	9.800647049772198	9.206767037375712	CCTTTGTT
chr1	183169018	183169019	chr1:183169019:C:T	rs11801241	C	T	T	Sox2_MA0143.3	21	0	+	0	0	.
chr1	183180554	183180555	chr1:183180555:T:C	rs73040652	T	C	T	Sox2_MA0143.3	23	0	-	0	0	.
chr1	183180985	183180986	chr1:183180986:C:A	rs112586527	C	A	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr1	183231723	183231724	chr1:183231724:G:C	chr1:183231724:G:C	G	C	G	Sox2_MA0143.3	10	0	-	0	0	.
chr1	183304212	183304213	chr1:183304213:G:A	rs17483344	G	A	G	Sox2_MA0143.3	24	0	-	0	0	.
chr1	183418807	183418808	chr1:183418808:G:C	rs6689029	G	C	G	Sox2_MA0143.3	-9	0	+	0	0	.
chr1	183587155	183587156	chr1:183587156:A:G	rs789192	A	G	G	Sox2_MA0143.3	21	0	-	0	0	.
chr1	183604092	183604093	chr1:183604093:G:A	rs2767314	G	A	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr1	183627567	183627568	chr1:183627568:G:A	rs2231241	G	A	G	Sox2_MA0143.3	1	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr1	183702147	183702148	chr1:183702148:A:G	rs7543703	A	G	A	Sox2_MA0143.3	-1	0	+	0	0	.
chr1	183707655	183707656	chr1:183707656:C:G	rs12117797	C	G	G	Sox2_MA0143.3	16	0	-	0	0	.
chr1	183739292	183739293	chr1:183739293:G:A	rs6703990	G	A	A	Sox2_MA0143.3	21	0	+	0	0	.
chr1	183881420	183881421	chr1:183881421:A:G	rs57106900	A	G	G	Sox2_MA0143.3	24	0	-	0	0	.
chr1	183911376	183911377	chr1:183911377:G:A	rs535383987	G	A	G	Sox2_MA0143.3	14	0	+	0	0	.
chr1	183957051	183957052	chr1:183957052:A:G	rs57529329	A	G	A	Sox2_MA0143.3	3	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr1	183996602	183996603	chr1:183996603:G:A	rs12059407	G	A	G	Sox2_MA0143.3	10	0	-	0	0	.
chr1	184225510	184225511	chr1:184225511:C:G	rs150818955	C	G	C	Sox2_MA0143.3	1	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr1	184248844	184248845	chr1:184248845:T:C	rs1930285	T	C	T	Sox2_MA0143.3	4	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr1	184293885	184293886	chr1:184293886:A:G	chr1:184293886:A:G	A	G	A	Sox2_MA0143.3	-20	0	+	0	0	.
chr1	184313670	184313671	chr1:184313671:T:C	rs7522468	T	C	T	Sox2_MA0143.3	-5	0	+	0	0	.
chr1	184349418	184349419	chr1:184349419:A:G	rs10797957	A	G	G	Sox2_MA0143.3	16	0	+	0	0	.
chr1	184480926	184480927	chr1:184480927:G:C	rs12565457	G	C	G	Sox2_MA0143.3	23	0	+	0	0	.
chr1	184504793	184504794	chr1:184504794:T:A	rs187754093	T	A	T	Sox2_MA0143.3	-11	0	+	0	0	.
chr1	184792525	184792526	chr1:184792526:G:A	rs116051722	G	A	G	Sox2_MA0143.3	-9	0	+	0	0	.
chr1	184870691	184870692	chr1:184870692:G:A	rs593294	G	A	G	Sox2_MA0143.3	19	0	+	0	0	.
chr1	184880343	184880344	chr1:184880344:C:T	rs234656	C	T	T	Sox2_MA0143.3	-6	0	+	0	0	.
chr1	184982301	184982302	chr1:184982302:G:A	rs74655026	G	A	G	Sox2_MA0143.3	16	0	-	0	0	.
chr1	184982331	184982332	chr1:184982332:T:C	chr1:184982332:T:C	T	C	T	Sox2_MA0143.3	-14	0	-	0	0	.
chr1	185244805	185244806	chr1:185244806:C:G	rs567559184	C	G	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr1	185317544	185317545	chr1:185317545:C:T	rs192066775	C	T	C	Sox2_MA0143.3	9	0	+	0	0	.
chr1	185441883	185441884	chr1:185441884:A:G	rs74132492	A	G	A	Sox2_MA0143.3	-18	0	+	0	0	.
chr1	185541088	185541089	chr1:185541089:C:T	rs7542383	C	T	T	Sox2_MA0143.3	20	0	-	0	0	.
chr1	185542290	185542291	chr1:185542291:A:G	rs2174296	A	G	A	Sox2_MA0143.3	22	0	-	0	0	.
chr1	185999490	185999491	chr1:185999491:C:A	rs12143563	C	A	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr1	186183301	186183302	chr1:186183302:A:G	rs78137894	A	G	A	Sox2_MA0143.3	16	0	-	0	0	.
chr1	186184076	186184077	chr1:186184077:C:G	rs144020545	C	G	C	Sox2_MA0143.3	0	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr1	186235470	186235471	chr1:186235471:C:T	rs864501	C	T	C	Sox2_MA0143.3	-20	0	-	0	0	.
chr1	186236036	186236037	chr1:186236037:G:A	rs596457	G	A	A	Sox2_MA0143.3	22	0	+	0	0	.
chr1	186303828	186303829	chr1:186303829:G:A	rs140857894	G	A	G	Sox2_MA0143.3	10	0	-	0	0	.
chr1	186376919	186376920	chr1:186376920:A:C	rs76991105	A	C	A	Sox2_MA0143.3	20	0	-	0	0	.
chr1	186441058	186441059	chr1:186441059:G:A	rs75036200	G	A	g	Sox2_MA0143.3	13	0	-	0	0	.
chr1	186492783	186492784	chr1:186492784:G:A	rs77861457	G	A	G	Sox2_MA0143.3	9	0	-	0	0	.
chr1	186492794	186492795	chr1:186492795:T:C	rs79264147	T	C	T	Sox2_MA0143.3	-2	0	-	0	0	.
chr1	186579484	186579485	chr1:186579485:T:C	rs10911890	T	C	C	Sox2_MA0143.3	25	0	+	0	0	.
chr1	186681301	186681302	chr1:186681302:G:C	rs11567815	G	C	G	Sox2_MA0143.3	0	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr1	186806644	186806645	chr1:186806645:C:T	rs74135000	C	T	T	Sox2_MA0143.3	13	0	-	0	0	.
chr1	186870728	186870729	chr1:186870729:G:A	rs7547993	G	A	G	Sox2_MA0143.3	-3	0	-	0	0	.
chr1	187000034	187000035	chr1:187000035:T:C	rs12566908	T	C	T	Sox2_MA0143.3	13	0	+	0	0	.
chr1	187122239	187122240	chr1:187122240:A:C	rs2144439	A	C	A	Sox2_MA0143.3	22	0	-	0	0	.
chr1	187166479	187166480	chr1:187166480:C:A	rs12133085	C	A	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr1	187270272	187270273	chr1:187270273:G:A	rs330736	G	A	g	Sox2_MA0143.3	15	0	+	0	0	.
chr1	187357581	187357582	chr1:187357582:A:C	rs2800913	A	C	C	Sox2_MA0143.3	27	0	-	0	0	.
chr1	187577897	187577898	chr1:187577898:T:C	rs2789396	T	C	t	Sox2_MA0143.3	26	0	+	0	0	.
chr1	188013215	188013216	chr1:188013216:G:T	rs150459543	G	T	G	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr1	188155534	188155535	chr1:188155535:G:A	rs7542386	G	A	G	Sox2_MA0143.3	7	1	-	9.206767037375712	9.800647049772198	CCTTTGTC
chr1	188238225	188238226	chr1:188238226:A:G	rs3011976	A	G	A	Sox2_MA0143.3	26	0	-	0	0	.
chr1	188240669	188240670	chr1:188240670:C:G	rs3011979	C	G	C	Sox2_MA0143.3	27	0	-	0	0	.
chr1	188356406	188356407	chr1:188356407:G:T	rs12021506	G	T	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr1	188489856	188489857	chr1:188489857:C:T	rs6656158	C	T	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr1	188564217	188564218	chr1:188564218:G:C	rs28548328	G	C	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr1	188564233	188564234	chr1:188564234:T:A	rs28428602	T	A	T	Sox2_MA0143.3	15	0	+	0	0	.
chr1	188706953	188706954	chr1:188706954:A:C	rs4370769	A	C	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr1	188761264	188761265	chr1:188761265:A:T	rs10922186	A	T	A	Sox2_MA0143.3	23	0	+	0	0	.
chr1	188761518	188761519	chr1:188761519:C:G	rs4503351	C	G	C	Sox2_MA0143.3	8	0	-	0	0	.
chr1	189644216	189644217	chr1:189644217:C:A	rs567812	C	A	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr1	189658558	189658559	chr1:189658559:C:T	chr1:189658559:C:T	C	T	C	Sox2_MA0143.3	1	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr1	189703927	189703928	chr1:189703928:A:C	rs481864	A	C	C	Sox2_MA0143.3	6	1	-	9.613475778572903	2.7047209992576837	CCATTGTT
chr1	190269342	190269343	chr1:190269343:A:G	rs12022837	A	G	A	Sox2_MA0143.3	19	0	-	0	0	.
chr1	190494676	190494677	chr1:190494677:C:T	rs746421	C	T	T	Sox2_MA0143.3	1	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr1	190906513	190906514	chr1:190906514:C:T	rs12411096	C	T	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr1	190966531	190966532	chr1:190966532:T:C	rs12743155	T	C	C	Sox2_MA0143.3	26	0	+	0	0	.
chr1	191126497	191126498	chr1:191126498:G:C	rs10920893	G	C	G	Sox2_MA0143.3	15	0	-	0	0	.
chr1	191149869	191149870	chr1:191149870:C:T	rs12087394	C	T	C	Sox2_MA0143.3	26	0	-	0	0	.
chr1	191522142	191522143	chr1:191522143:G:A	rs10494654	G	A	G	Sox2_MA0143.3	26	0	-	0	0	.
chr1	191821118	191821119	chr1:191821119:A:C	chr1:191821119:A:C	A	C	A	Sox2_MA0143.3	-15	0	-	0	0	.
chr1	191853118	191853119	chr1:191853119:T:C	rs9427791	T	C	T	Sox2_MA0143.3	6	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr1	192201120	192201121	chr1:192201121:C:G	rs1578102	C	G	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr1	192506795	192506796	chr1:192506796:T:C	rs2369755	T	C	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr1	192506797	192506798	chr1:192506798:T:C	rs145503872	T	C	T	Sox2_MA0143.3	-3	0	+	0	0	.
chr1	192536626	192536627	chr1:192536627:A:G	rs2224733	A	G	a	Sox2_MA0143.3	9	0	+	0	0	.
chr1	192566107	192566108	chr1:192566108:T:C	rs78279554	T	C	T	Sox2_MA0143.3	3	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr1	192737305	192737306	chr1:192737306:T:G	chr1:192737306:T:G	T	G	t	Sox2_MA0143.3	-9	0	-	0	0	.
chr1	192752085	192752086	chr1:192752086:C:T	rs116341335	C	T	C	Sox2_MA0143.3	7	1	-	8.864090315184848	3.5547341015215945	CCTTTGTG
chr1	193326197	193326198	chr1:193326198:G:C	rs12124282	G	C	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr1	193407056	193407057	chr1:193407057:C:T	rs145300134	C	T	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr1	193407205	193407206	chr1:193407206:G:T	rs144987317	G	T	G	Sox2_MA0143.3	14	0	+	0	0	.
chr1	193495306	193495307	chr1:193495307:G:A	rs6694398	G	A	G	Sox2_MA0143.3	-2	0	+	0	0	.
chr1	193495332	193495333	chr1:193495333:C:G	rs6670819	C	G	C	Sox2_MA0143.3	24	0	+	0	0	.
chr1	193589103	193589104	chr1:193589104:G:A	rs148051869	G	A	G	Sox2_MA0143.3	0	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr1	193592361	193592362	chr1:193592362:A:G	rs34273316	A	G	A	Sox2_MA0143.3	9	0	-	0	0	.
chr1	193655650	193655651	chr1:193655651:T:C	rs116372673	T	C	T	Sox2_MA0143.3	19	0	-	0	0	.
chr1	193712281	193712282	chr1:193712282:C:A	rs10921413	C	A	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr1	194045637	194045638	chr1:194045638:G:A	rs73062798	G	A	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr1	194056092	194056093	chr1:194056093:G:A	rs61831386	G	A	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr1	194114682	194114683	chr1:194114683:C:T	rs596033	C	T	T	Sox2_MA0143.3	8	0	+	0	0	.
chr1	194296910	194296911	chr1:194296911:C:A	rs80045422	C	A	C	Sox2_MA0143.3	7	1	-	8.864090315184848	9.800647049772198	CCTTTGTG
chr1	194338447	194338448	chr1:194338448:A:T	rs10801296	A	T	A	Sox2_MA0143.3	-12	0	+	0	0	.
chr1	194358179	194358180	chr1:194358180:C:T	rs115291768	C	T	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr1	194478963	194478964	chr1:194478964:C:G	rs10921586	C	G	C	Sox2_MA0143.3	15	0	-	0	0	.
chr1	194564091	194564092	chr1:194564092:A:G	rs76591088	A	G	A	Sox2_MA0143.3	-10	0	-	0	0	.
chr1	195019602	195019603	chr1:195019603:T:A	rs12747470	T	A	T	Sox2_MA0143.3	22	0	-	0	0	.
chr1	195034689	195034690	chr1:195034690:A:G	rs12028036	A	G	G	Sox2_MA0143.3	10	0	+	0	0	.
chr1	195160911	195160912	chr1:195160912:C:G	rs646395	C	G	C	Sox2_MA0143.3	5	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr1	195604604	195604605	chr1:195604605:C:T	chr1:195604605:C:T	C	T	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr1	195663699	195663700	chr1:195663700:G:A	rs72732042	G	A	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr1	195697399	195697400	chr1:195697400:A:C	rs116119319	A	C	A	Sox2_MA0143.3	-3	0	+	0	0	.
chr1	195851940	195851941	chr1:195851941:C:T	rs6428307	C	T	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr1	195855884	195855885	chr1:195855885:G:A	rs4276894	G	A	A	Sox2_MA0143.3	16	0	+	0	0	.
chr1	195947872	195947873	chr1:195947873:G:T	rs4483387	G	T	G	Sox2_MA0143.3	-12	0	+	0	0	.
chr1	195947879	195947880	chr1:195947880:C:T	rs4298712	C	T	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr1	195958395	195958396	chr1:195958396:A:C	rs12402811	A	C	A	Sox2_MA0143.3	-17	0	+	0	0	.
chr1	196099238	196099239	chr1:196099239:G:T	rs4545316	G	T	G	Sox2_MA0143.3	22	0	-	0	0	.
chr1	196144768	196144769	chr1:196144769:C:T	rs72748424	C	T	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr1	196267294	196267295	chr1:196267295:C:T	rs1998652	C	T	T	Sox2_MA0143.3	25	0	+	0	0	.
chr1	196400816	196400817	chr1:196400817:G:A	rs2878551	G	A	G	Sox2_MA0143.3	0	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr1	196544780	196544781	chr1:196544781:C:A	rs566746588	C	A	C	Sox2_MA0143.3	10	0	-	0	0	.
chr1	196594104	196594105	chr1:196594105:C:T	rs147209840	C	T	C	Sox2_MA0143.3	13	0	-	0	0	.
chr1	196810194	196810195	chr1:196810195:T:A	rs652736	T	A	T	Sox2_MA0143.3	18	0	-	0	0	.
chr1	196896452	196896453	chr1:196896453:G:A	rs34924297	G	A	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr1	197101645	197101646	chr1:197101646:C:T	rs10922162	C	T	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr1	197399834	197399835	chr1:197399835:G:T	rs2821100	G	T	G	Sox2_MA0143.3	26	0	-	0	0	.
chr1	197775756	197775757	chr1:197775757:G:A	rs114353656	G	A	G	Sox2_MA0143.3	18	0	-	0	0	.
chr1	197799609	197799610	chr1:197799610:G:A	rs74134875	G	A	G	Sox2_MA0143.3	23	0	+	0	0	.
chr1	198024974	198024975	chr1:198024975:G:A	rs145401816	G	A	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr1	198042395	198042396	chr1:198042396:C:T	rs60040932	C	T	C	Sox2_MA0143.3	25	0	-	0	0	.
chr1	198088133	198088134	chr1:198088134:G:A	rs80064309	G	A	G	Sox2_MA0143.3	5	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr1	198107512	198107513	chr1:198107513:G:A	rs79375018	G	A	G	Sox2_MA0143.3	25	0	-	0	0	.
chr1	198316926	198316927	chr1:198316927:G:A	rs16829977	G	A	G	Sox2_MA0143.3	14	0	+	0	0	.
chr1	198387998	198387999	chr1:198387999:C:A	rs79831823	C	A	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr1	198669089	198669090	chr1:198669090:C:T	rs6694941	C	T	T	Sox2_MA0143.3	-12	0	-	0	0	.
chr1	198678730	198678731	chr1:198678731:T:C	rs12093318	T	C	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr1	198682649	198682650	chr1:198682650:C:T	rs12127956	C	T	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr1	198949394	198949395	chr1:198949395:A:G	rs4915332	A	G	G	Sox2_MA0143.3	-11	0	+	0	0	.
chr1	198986220	198986221	chr1:198986221:T:A	rs10919609	T	A	T	Sox2_MA0143.3	12	0	+	0	0	.
chr1	199346869	199346870	chr1:199346870:C:T	rs648163	C	T	C	Sox2_MA0143.3	27	0	+	0	0	.
chr1	199433847	199433848	chr1:199433848:C:A	rs5779967	C	A	C	Sox2_MA0143.3	27	0	+	0	0	.
chr1	199723400	199723401	chr1:199723401:C:G	rs3003526	C	G	g	Sox2_MA0143.3	11	0	+	0	0	.
chr1	199830873	199830874	chr1:199830874:T:C	rs6694753	T	C	C	Sox2_MA0143.3	-12	0	-	0	0	.
chr1	199957055	199957056	chr1:199957056:G:A	rs4915398	G	A	A	Sox2_MA0143.3	5	1	+	9.019595766176417	2.110840986861197	CCATTGTC
chr1	199988743	199988744	chr1:199988744:G:T	rs12724022	G	T	g	Sox2_MA0143.3	-4	0	-	0	0	.
chr1	200076254	200076255	chr1:200076255:T:C	rs1014949838	T	C	T	Sox2_MA0143.3	-8	0	+	0	0	.
chr1	200104053	200104054	chr1:200104054:C:T	rs61819954	C	T	C	Sox2_MA0143.3	1	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr1	200115875	200115876	chr1:200115876:A:G	rs2816972	A	G	G	Sox2_MA0143.3	18	0	+	0	0	.
chr1	200228409	200228410	chr1:200228410:A:G	rs12128213	A	G	A	Sox2_MA0143.3	8	0	+	0	0	.
chr1	200236697	200236698	chr1:200236698:C:T	rs1339576	C	T	T	Sox2_MA0143.3	-5	0	+	0	0	.
chr1	200302214	200302215	chr1:200302215:G:C	rs819637	G	C	C	Sox2_MA0143.3	13	0	+	0	0	.
chr1	200366524	200366525	chr1:200366525:A:C	rs2790142	A	C	C	Sox2_MA0143.3	8	0	-	0	0	.
chr1	200410002	200410003	chr1:200410003:T:G	chr1:200410003:T:G	T	G	T	Sox2_MA0143.3	11	0	-	0	0	.
chr1	200814024	200814025	chr1:200814025:T:C	rs72746858	T	C	T	Sox2_MA0143.3	19	0	-	0	0	.
chr1	200897142	200897143	chr1:200897143:A:G	rs772600547	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr1	200905966	200905967	chr1:200905967:T:C	rs12132298	T	C	T	Sox2_MA0143.3	6	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr1	200905975	200905976	chr1:200905976:T:C	rs547881	T	C	C	Sox2_MA0143.3	15	0	+	0	0	.
chr1	200908433	200908434	chr1:200908434:C:A	rs7554511	C	A	C	Sox2_MA0143.3	26	0	-	0	0	.
chr1	200971051	200971052	chr1:200971052:G:A	rs3198583	G	A	G	Sox2_MA0143.3	-9	0	+	0	0	.
chr1	200982178	200982179	chr1:200982179:G:A	rs72749142	G	A	G	Sox2_MA0143.3	13	0	-	0	0	.
chr1	201023733	201023734	chr1:201023734:C:T	rs533851706	C	T	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr1	201043153	201043154	chr1:201043154:T:C	rs556683985	T	C	T	Sox2_MA0143.3	13	0	-	0	0	.
chr1	201132284	201132285	chr1:201132285:C:T	rs6697303	C	T	T	Sox2_MA0143.3	-12	0	-	0	0	.
chr1	201154652	201154653	chr1:201154653:C:G	rs3753964	C	G	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr1	201154670	201154671	chr1:201154671:G:C	rs1106729	G	C	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr1	201164645	201164646	chr1:201164646:G:A	rs863826	G	A	G	Sox2_MA0143.3	0	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr1	201225045	201225046	chr1:201225046:A:G	rs12134361	A	G	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr1	201228038	201228039	chr1:201228039:A:T	rs184961497	A	T	A	Sox2_MA0143.3	-5	0	+	0	0	.
chr1	201229178	201229179	chr1:201229179:T:G	rs6427890	T	G	G	Sox2_MA0143.3	3	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr1	201245447	201245448	chr1:201245448:A:C	rs4915499	A	C	A	Sox2_MA0143.3	17	0	-	0	0	.
chr1	201284987	201284988	chr1:201284988:G:A	rs1257394	G	A	A	Sox2_MA0143.3	9	0	-	0	0	.
chr1	201285833	201285834	chr1:201285834:T:G	rs75888275	T	G	T	Sox2_MA0143.3	11	0	+	0	0	.
chr1	201331924	201331925	chr1:201331925:G:A	rs17425876	G	A	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr1	201420158	201420159	chr1:201420159:C:A	rs749240052	C	A	C	Sox2_MA0143.3	16	0	+	0	0	.
chr1	201448366	201448367	chr1:201448367:G:T	rs146717510	G	T	G	Sox2_MA0143.3	15	0	-	0	0	.
chr1	201450759	201450760	chr1:201450760:G:C	rs142512413	G	C	G	Sox2_MA0143.3	14	0	-	0	0	.
chr1	201450773	201450774	chr1:201450774:G:C	rs986406160	G	C	G	Sox2_MA0143.3	0	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr1	201450779	201450780	chr1:201450780:C:G	rs112046406	C	G	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr1	201476587	201476588	chr1:201476588:A:T	chr1:201476588:A:T	A	T	A	Sox2_MA0143.3	-18	0	+	0	0	.
chr1	201505725	201505726	chr1:201505726:T:A	rs61819661	T	A	A	Sox2_MA0143.3	-14	0	-	0	0	.
chr1	201524343	201524344	chr1:201524344:A:G	rs36001178	A	G	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr1	201530690	201530691	chr1:201530691:A:G	chr1:201530691:A:G	A	G	A	Sox2_MA0143.3	24	0	-	0	0	.
chr1	201530697	201530698	chr1:201530698:T:G	chr1:201530698:T:G	T	G	T	Sox2_MA0143.3	17	0	-	0	0	.
chr1	201555283	201555284	chr1:201555284:G:A	rs12030585	G	A	A	Sox2_MA0143.3	14	0	+	0	0	.
chr1	201559806	201559807	chr1:201559807:C:T	rs139448864	C	T	C	Sox2_MA0143.3	15	0	+	0	0	.
chr1	201561938	201561939	chr1:201561939:G:T	rs73082554	G	T	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr1	201569859	201569860	chr1:201569860:T:C	rs12081043	T	C	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr1	201605315	201605316	chr1:201605316:T:C	rs1534871	T	C	T	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr1	201731726	201731727	chr1:201731727:G:A	rs61821712	G	A	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr1	201737740	201737741	chr1:201737741:C:T	rs80346442	C	T	C	Sox2_MA0143.3	17	0	-	0	0	.
chr1	201737760	201737761	chr1:201737761:G:A	rs112764372	G	A	G	Sox2_MA0143.3	-3	0	-	0	0	.
chr1	201745344	201745345	chr1:201745345:G:T	rs149731773	G	T	G	Sox2_MA0143.3	11	0	-	0	0	.
chr1	201760781	201760782	chr1:201760782:A:C	rs239978	A	C	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr1	201773959	201773960	chr1:201773960:A:G	rs190776483	A	G	A	Sox2_MA0143.3	11	0	+	0	0	.
chr1	201883917	201883918	chr1:201883918:C:G	rs963109887	C	G	C	Sox2_MA0143.3	27	0	-	0	0	.
chr1	202004832	202004833	chr1:202004833:G:A	rs3795621	G	A	G	Sox2_MA0143.3	11	0	-	0	0	.
chr1	202009311	202009312	chr1:202009312:G:A	rs553990446	G	A	G	Sox2_MA0143.3	13	0	+	0	0	.
chr1	202039788	202039789	chr1:202039789:T:C	rs9427472	T	C	T	Sox2_MA0143.3	-9	0	+	0	0	.
chr1	202043388	202043389	chr1:202043389:C:T	rs114191416	C	T	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr1	202107449	202107450	chr1:202107450:T:G	chr1:202107450:T:G	T	G	T	Sox2_MA0143.3	-9	0	-	0	0	.
chr1	202129881	202129882	chr1:202129882:A:G	chr1:202129882:A:G	A	G	A	Sox2_MA0143.3	-18	0	+	0	0	.
chr1	202129916	202129917	chr1:202129917:G:A	rs16849688	G	A	G	Sox2_MA0143.3	17	0	+	0	0	.
chr1	202130557	202130558	chr1:202130558:G:A	rs112801260	G	A	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr1	202130889	202130890	chr1:202130890:T:G	chr1:202130890:T:G	T	G	T	Sox2_MA0143.3	-2	0	-	0	0	.
chr1	202133249	202133250	chr1:202133250:G:A	rs16849707	G	A	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr1	202133263	202133264	chr1:202133264:C:T	rs41270967	C	T	C	Sox2_MA0143.3	1	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr1	202172025	202172026	chr1:202172026:A:T	rs61736271	A	T	A	Sox2_MA0143.3	25	0	+	0	0	.
chr1	202183730	202183731	chr1:202183731:A:C	rs2993441	A	C	A	Sox2_MA0143.3	-5	0	+	0	0	.
chr1	202214341	202214342	chr1:202214342:G:A	rs577582058	G	A	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr1	202228422	202228423	chr1:202228423:C:A	rs3820383	C	A	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr1	202252145	202252146	chr1:202252146:C:A	rs2924111	C	A	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr1	202264820	202264821	chr1:202264821:T:C	rs115732196	T	C	T	Sox2_MA0143.3	11	0	-	0	0	.
chr1	202310580	202310581	chr1:202310581:A:G	rs705766	A	G	A	Sox2_MA0143.3	6	1	-	9.613475778572903	2.7047209992576837	CCATTGTT
chr1	202352984	202352985	chr1:202352985:T:G	rs6658708	T	G	T	Sox2_MA0143.3	-9	0	+	0	0	.
chr1	202545817	202545818	chr1:202545818:G:A	rs4950856	G	A	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr1	202591162	202591163	chr1:202591163:C:T	rs114627427	C	T	C	Sox2_MA0143.3	23	0	-	0	0	.
chr1	202638642	202638643	chr1:202638643:G:A	rs6658690	G	A	G	Sox2_MA0143.3	0	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr1	202807559	202807560	chr1:202807560:G:A	rs1337704176	G	A	G	Sox2_MA0143.3	23	0	-	0	0	.
chr1	202808753	202808754	chr1:202808754:T:G	rs376308448	T	G	T	Sox2_MA0143.3	-5	0	-	0	0	.
chr1	202862740	202862741	chr1:202862741:T:G	rs6427973	T	G	G	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr1	202890471	202890472	chr1:202890472:A:G	rs3806346	A	G	A	Sox2_MA0143.3	-8	0	+	0	0	.
chr1	202964863	202964864	chr1:202964864:G:C	rs1418445	G	C	C	Sox2_MA0143.3	14	0	-	0	0	.
chr1	202964875	202964876	chr1:202964876:T:C	rs115460627	T	C	T	Sox2_MA0143.3	2	1	-	9.019595766176417	2.900948058900136	CCATTGTC
chr1	203045067	203045068	chr1:203045068:T:C	rs4472812	T	C	-	Sox2_MA0143.3	-8	0	+	0	0	.
chr1	203045093	203045094	chr1:203045094:C:T	rs12405932	C	T	t	Sox2_MA0143.3	18	0	+	0	0	.
chr1	203053993	203053994	chr1:203053994:A:C	rs2291691	A	C	N	Sox2_MA0143.3	-18	0	+	0	0	.
chr1	203127638	203127639	chr1:203127639:G:A	chr1:203127639:G:A	G	A	G	Sox2_MA0143.3	21	0	+	0	0	.
chr1	203151646	203151647	chr1:203151647:C:T	rs4950925	C	T	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr1	203170660	203170661	chr1:203170661:C:G	rs140445030	C	G	C	Sox2_MA0143.3	0	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr1	203185926	203185927	chr1:203185927:G:A	rs4950881	G	A	A	Sox2_MA0143.3	23	0	-	0	0	.
chr1	203289275	203289276	chr1:203289276:A:G	rs181398900	A	G	A	Sox2_MA0143.3	-8	0	+	0	0	.
chr1	203306278	203306279	chr1:203306279:C:G	rs17534048	C	G	C	Sox2_MA0143.3	12	0	+	0	0	.
chr1	203315707	203315708	chr1:203315708:A:G	rs111496681	A	G	g	Sox2_MA0143.3	27	0	+	0	0	.
chr1	203382129	203382130	chr1:203382130:A:G	rs187889288	A	G	A	Sox2_MA0143.3	11	0	+	0	0	.
chr1	203390478	203390479	chr1:203390479:C:T	rs75158867	C	T	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr1	203450594	203450595	chr1:203450595:A:G	rs79715636	A	G	A	Sox2_MA0143.3	3	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr1	203460494	203460495	chr1:203460495:G:A	rs74599912	G	A	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr1	203491544	203491545	chr1:203491545:T:C	rs16851713	T	C	T	Sox2_MA0143.3	11	0	-	0	0	.
chr1	203508718	203508719	chr1:203508719:G:A	rs114963352	G	A	G	Sox2_MA0143.3	16	0	-	0	0	.
chr1	203512792	203512793	chr1:203512793:G:A	rs13302988	G	A	A	Sox2_MA0143.3	23	0	-	0	0	.
chr1	203520554	203520555	chr1:203520555:C:T	rs60226453	C	T	C	Sox2_MA0143.3	20	0	-	0	0	.
chr1	203521212	203521213	chr1:203521213:C:T	chr1:203521213:C:T	C	T	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr1	203522545	203522546	chr1:203522546:G:T	rs115535696	G	T	G	Sox2_MA0143.3	1	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr1	203522564	203522565	chr1:203522565:G:A	rs115780918	G	A	A	Sox2_MA0143.3	-18	0	-	0	0	.
chr1	203563581	203563582	chr1:203563582:A:C	rs6605220	A	C	A	Sox2_MA0143.3	-18	0	-	0	0	.
chr1	203573899	203573900	chr1:203573900:G:C	rs28512476	G	C	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr1	203592967	203592968	chr1:203592968:T:C	rs139529945	T	C	T	Sox2_MA0143.3	2	1	-	8.676919043985553	2.5582713367092715	CCATTGTG
chr1	203792587	203792588	chr1:203792588:C:A	rs7540455	C	A	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr1	203944917	203944918	chr1:203944918:G:A	rs16852536	G	A	A	Sox2_MA0143.3	12	0	-	0	0	.
chr1	203996832	203996833	chr1:203996833:G:A	rs535962754	G	A	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr1	204013204	204013205	chr1:204013205:G:A	rs2796433	G	A	G	Sox2_MA0143.3	21	0	-	0	0	.
chr1	204015009	204015010	chr1:204015010:C:G	rs9438467	C	G	G	Sox2_MA0143.3	15	0	-	0	0	.
chr1	204026601	204026602	chr1:204026602:G:A	rs72747845	G	A	G	Sox2_MA0143.3	10	0	-	0	0	.
chr1	204065464	204065465	chr1:204065465:G:C	rs542490688	G	C	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr1	204080660	204080661	chr1:204080661:G:C	rs942556304	G	C	G	Sox2_MA0143.3	0	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr1	204128617	204128618	chr1:204128618:C:T	rs10900550	C	T	C	Sox2_MA0143.3	23	0	-	0	0	.
chr1	204172029	204172030	chr1:204172030:T:C	rs114808340	T	C	T	Sox2_MA0143.3	2	1	-	9.019595766176417	2.900948058900136	CCATTGTC
chr1	204198543	204198544	chr1:204198544:T:C	rs3795573	T	C	T	Sox2_MA0143.3	-13	0	-	0	0	.
chr1	204220228	204220229	chr1:204220229:C:T	rs61817031	C	T	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr1	204314446	204314447	chr1:204314447:T:C	rs17333822	T	C	T	Sox2_MA0143.3	-7	0	-	0	0	.
chr1	204409646	204409647	chr1:204409647:T:C	rs17855962	T	C	T	Sox2_MA0143.3	-16	0	-	0	0	.
chr1	204410629	204410630	chr1:204410630:C:T	rs149427705	C	T	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr1	204439291	204439292	chr1:204439292:G:A	rs141430660	G	A	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr1	204477559	204477560	chr1:204477560:A:G	rs1980050	A	G	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr1	204508848	204508849	chr1:204508849:A:G	rs11240754	A	G	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr1	204652112	204652113	chr1:204652113:G:A	rs72753876	G	A	G	Sox2_MA0143.3	7	1	-	9.206767037375712	9.800647049772198	CCTTTGTC
chr1	204652118	204652119	chr1:204652119:G:A	rs2492985	G	A	G	Sox2_MA0143.3	1	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr1	204663914	204663915	chr1:204663915:G:A	rs78225439	G	A	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr1	204733937	204733938	chr1:204733938:G:A	rs12408321	G	A	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr1	204839448	204839449	chr1:204839449:C:T	rs16854508	C	T	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr1	204843151	204843152	chr1:204843152:T:A	rs189844998	T	A	T	Sox2_MA0143.3	2	1	+	9.800647049772198	9.613475778572903	CCTTTGTT
chr1	204850632	204850633	chr1:204850633:T:C	rs7529113	T	C	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr1	204916005	204916006	chr1:204916006:G:A	rs6665518	G	A	A	Sox2_MA0143.3	-6	0	+	0	0	.
chr1	205029246	205029247	chr1:205029247:T:C	rs4951155	T	C	T	Sox2_MA0143.3	-11	0	+	0	0	.
chr1	205048359	205048360	chr1:205048360:C:T	rs112193230	C	T	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr1	205048372	205048373	chr1:205048373:C:T	rs752163330	C	T	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr1	205125273	205125274	chr1:205125274:T:C	rs140161582	T	C	T	Sox2_MA0143.3	7	1	+	9.613475778572903	9.019595766176417	CCATTGTT
chr1	205156533	205156534	chr1:205156534:T:C	rs7538328	T	C	T	Sox2_MA0143.3	3	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr1	205283977	205283978	chr1:205283978:C:G	rs185901023	C	G	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr1	205284852	205284853	chr1:205284853:G:A	rs757099873	G	A	G	Sox2_MA0143.3	0	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr1	205284853	205284854	chr1:205284854:C:A	rs767294258	C	A	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr1	205285109	205285110	chr1:205285110:G:A	rs1151787	G	A	G	Sox2_MA0143.3	26	0	+	0	0	.
chr1	205316625	205316626	chr1:205316626:A:G	rs73085132	A	G	A	Sox2_MA0143.3	-17	0	-	0	0	.
chr1	205331779	205331780	chr1:205331780:T:C	rs6689440	T	C	C	Sox2_MA0143.3	6	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr1	205352999	205353000	chr1:205353000:G:C	rs7541070	G	C	G	Sox2_MA0143.3	5	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr1	205442112	205442113	chr1:205442113:G:A	rs149843208	G	A	G	Sox2_MA0143.3	19	0	-	0	0	.
chr1	205446285	205446286	chr1:205446286:G:C	rs11579265	G	C	G	Sox2_MA0143.3	26	0	+	0	0	.
chr1	205548701	205548702	chr1:205548702:A:G	rs11240515	A	G	G	Sox2_MA0143.3	10	0	-	0	0	.
chr1	205548725	205548726	chr1:205548726:T:C	rs116660751	T	C	T	Sox2_MA0143.3	-14	0	-	0	0	.
chr1	205557068	205557069	chr1:205557069:A:G	rs6593950	A	G	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr1	205565853	205565854	chr1:205565854:G:A	rs75755293	G	A	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr1	205600041	205600042	chr1:205600042:T:C	rs12080053	T	C	T	Sox2_MA0143.3	-15	0	-	0	0	.
chr1	205816509	205816510	chr1:205816510:C:G	rs1891093	C	G	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr1	205827147	205827148	chr1:205827148:C:T	rs12071261	C	T	C	Sox2_MA0143.3	15	0	-	0	0	.
chr1	205916825	205916826	chr1:205916826:G:A	rs571447638	G	A	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr1	205919014	205919015	chr1:205919015:G:C	rs11240593	G	C	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr1	206008378	206008379	chr1:206008379:G:A	rs956157415	G	A	G	Sox2_MA0143.3	18	0	-	0	0	.
chr1	206101059	206101060	chr1:206101060:C:T	rs28523378	C	T	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr1	206113094	206113095	chr1:206113095:A:G	rs28477649	A	G	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr1	206113097	206113098	chr1:206113098:G:A	rs138727807	G	A	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr1	206114222	206114223	chr1:206114223:C:G	rs3883899	C	G	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr1	206260804	206260805	chr1:206260805:C:G	rs61815473	C	G	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr1	206299628	206299629	chr1:206299629:G:A	rs1348420720	G	A	G	Sox2_MA0143.3	21	0	+	0	0	.
chr1	206356540	206356541	chr1:206356541:G:C	rs142603987	G	C	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr1	206449541	206449542	chr1:206449542:G:C	rs10158380	G	C	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr1	206525015	206525016	chr1:206525016:A:G	rs4559502	A	G	G	Sox2_MA0143.3	25	0	+	0	0	.
chr1	206891011	206891012	chr1:206891012:C:T	rs73089059	C	T	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr1	206891026	206891027	chr1:206891027:A:G	rs574684	A	G	A	Sox2_MA0143.3	14	0	+	0	0	.
chr1	206962390	206962391	chr1:206962391:G:C	rs55633368	G	C	G	Sox2_MA0143.3	13	0	-	0	0	.
chr1	207004917	207004918	chr1:207004918:T:A	rs2791701	T	A	G	Sox2_MA0143.3	4	1	+	9.800647049772198	2.8918922704569785	CCTTTGTT
chr1	207004917	207004918	chr1:207004918:T:G	chr1:207004918:T:G	T	G	G	Sox2_MA0143.3	4	1	+	9.800647049772198	2.8918922704569785	CCTTTGTT
chr1	207058405	207058406	chr1:207058406:A:T	rs2808454	A	T	T	Sox2_MA0143.3	-2	0	+	0	0	.
chr1	207058407	207058408	chr1:207058408:C:G	rs115834779	C	G	C	Sox2_MA0143.3	0	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr1	207219295	207219296	chr1:207219296:C:G	rs148524642	C	G	c	Sox2_MA0143.3	-16	0	+	0	0	.
chr1	207305634	207305635	chr1:207305635:C:A	rs1572275	C	A	A	Sox2_MA0143.3	24	0	+	0	0	.
chr1	207329026	207329027	chr1:207329027:T:G	rs6703002	T	G	T	Sox2_MA0143.3	-10	0	+	0	0	.
chr1	207464013	207464014	chr1:207464014:T:C	rs3767933	T	C	T	Sox2_MA0143.3	6	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr1	207496669	207496670	chr1:207496670:G:C	rs541620904	G	C	G	Sox2_MA0143.3	-11	0	+	0	0	.
chr1	207579204	207579205	chr1:207579205:T:G	rs601356	T	G	g	Sox2_MA0143.3	-15	0	-	0	0	.
chr1	207579999	207580000	chr1:207580000:C:T	rs2274566	C	T	c	Sox2_MA0143.3	-8	0	-	0	0	.
chr1	207650059	207650060	chr1:207650060:C:T	rs1323722	C	T	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr1	207669133	207669134	chr1:207669134:G:T	rs11589830	G	T	-	Sox2_MA0143.3	10	0	+	0	0	.
chr1	207669143	207669144	chr1:207669144:C:T	rs11578598	C	T	-	Sox2_MA0143.3	20	0	+	0	0	.
chr1	207730342	207730343	chr1:207730343:C:G	rs2796251	C	G	C	Sox2_MA0143.3	9	0	+	0	0	.
chr1	207750834	207750835	chr1:207750835:T:C	rs72746365	T	C	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr1	207753216	207753217	chr1:207753217:A:G	rs17048430	A	G	A	Sox2_MA0143.3	11	0	-	0	0	.
chr1	207797500	207797501	chr1:207797501:G:A	chr1:207797501:G:A	G	A	G	Sox2_MA0143.3	12	0	+	0	0	.
chr1	207952987	207952988	chr1:207952988:C:T	rs74487254	C	T	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr1	208024536	208024537	chr1:208024537:G:C	rs591305	G	C	C	Sox2_MA0143.3	24	0	+	0	0	.
chr1	208099042	208099043	chr1:208099043:G:A	rs41283126	G	A	G	Sox2_MA0143.3	17	0	+	0	0	.
chr1	208116194	208116195	chr1:208116195:T:C	rs768876536	T	C	T	Sox2_MA0143.3	-7	0	+	0	0	.
chr1	208120167	208120168	chr1:208120168:A:G	rs4844645	A	G	G	Sox2_MA0143.3	2	1	-	8.864090315184848	2.5582713367092715	CCTTTGTG
chr1	208166906	208166907	chr1:208166907:T:G	rs17259394	T	G	T	Sox2_MA0143.3	19	0	-	0	0	.
chr1	208192945	208192946	chr1:208192946:G:A	rs75277157	G	A	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr1	208208130	208208131	chr1:208208131:C:A	rs12759501	C	A	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr1	208210147	208210148	chr1:208210148:C:T	rs116598682	C	T	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr1	208248315	208248316	chr1:208248316:T:A	chr1:208248316:T:A	T	A	T	Sox2_MA0143.3	12	0	-	0	0	.
chr1	208374653	208374654	chr1:208374654:G:A	rs116478823	G	A	G	Sox2_MA0143.3	14	0	+	0	0	.
chr1	208396129	208396130	chr1:208396130:A:G	rs696974	A	G	A	Sox2_MA0143.3	15	0	+	0	0	.
chr1	208477205	208477206	chr1:208477206:A:G	rs116415101	A	G	A	Sox2_MA0143.3	19	0	+	0	0	.
chr1	208521225	208521226	chr1:208521226:C:T	rs7518870	C	T	C	Sox2_MA0143.3	1	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr1	208537419	208537420	chr1:208537420:G:A	rs12121038	G	A	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr1	208538746	208538747	chr1:208538747:C:T	rs11119088	C	T	C	Sox2_MA0143.3	7	1	+	9.019595766176417	9.613475778572903	CCATTGTC
chr1	208575427	208575428	chr1:208575428:C:T	rs55724122	C	T	C	Sox2_MA0143.3	16	0	+	0	0	.
chr1	208582259	208582260	chr1:208582260:T:C	rs6540478	T	C	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr1	208811574	208811575	chr1:208811575:G:A	rs537998781	G	A	G	Sox2_MA0143.3	24	0	-	0	0	.
chr1	208917980	208917981	chr1:208917981:A:G	rs10047134	A	G	G	Sox2_MA0143.3	9	0	+	0	0	.
chr1	209046012	209046013	chr1:209046013:A:G	rs1411403	A	G	A	Sox2_MA0143.3	-7	0	-	0	0	.
chr1	209064124	209064125	chr1:209064125:A:C	rs12410473	A	C	A	Sox2_MA0143.3	27	0	-	0	0	.
chr1	209132319	209132320	chr1:209132320:C:T	rs2788166	C	T	T	Sox2_MA0143.3	-20	0	+	0	0	.
chr1	209248850	209248851	chr1:209248851:G:C	chr1:209248851:G:C	G	C	G	Sox2_MA0143.3	8	0	+	0	0	.
chr1	209379290	209379291	chr1:209379291:G:T	rs1006317	G	T	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr1	209401185	209401186	chr1:209401186:C:T	rs115033978	C	T	C	Sox2_MA0143.3	12	0	-	0	0	.
chr1	209485247	209485248	chr1:209485248:T:C	rs75357826	T	C	T	Sox2_MA0143.3	27	0	-	0	0	.
chr1	209544273	209544274	chr1:209544274:T:C	rs571770266	T	C	T	Sox2_MA0143.3	4	1	+	9.206767037375712	2.2980122580604916	CCTTTGTC
chr1	209556478	209556479	chr1:209556479:A:T	rs9429996	A	T	A	Sox2_MA0143.3	-10	0	-	0	0	.
chr1	209630295	209630296	chr1:209630296:T:G	rs548688531	T	G	T	Sox2_MA0143.3	9	0	-	0	0	.
chr1	209659085	209659086	chr1:209659086:G:A	rs12022330	G	A	G	Sox2_MA0143.3	12	0	-	0	0	.
chr1	209831920	209831921	chr1:209831921:C:T	rs138055071	C	T	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr1	209844960	209844961	chr1:209844961:T:C	rs7525951	T	C	T	Sox2_MA0143.3	2	1	-	8.676919043985553	2.5582713367092715	CCATTGTG
chr1	209845518	209845519	chr1:209845519:G:T	rs17015359	G	T	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr1	209845555	209845556	chr1:209845556:C:G	rs17015361	C	G	C	Sox2_MA0143.3	21	0	+	0	0	.
chr1	209869789	209869790	chr1:209869790:A:G	rs12046618	A	G	A	Sox2_MA0143.3	12	0	+	0	0	.
chr1	209879619	209879620	chr1:209879620:T:C	rs142955514	T	C	T	Sox2_MA0143.3	-2	0	+	0	0	.
chr1	209884201	209884202	chr1:209884202:A:G	rs74485632	A	G	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr1	209978858	209978859	chr1:209978859:C:T	rs534721416	C	T	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr1	210188248	210188249	chr1:210188249:G:A	rs111306658	G	A	-	Sox2_MA0143.3	15	0	-	0	0	.
chr1	210343276	210343277	chr1:210343277:T:C	rs184744728	T	C	T	Sox2_MA0143.3	-12	0	-	0	0	.
chr1	210364533	210364534	chr1:210364534:A:T	rs184485422	A	T	a	Sox2_MA0143.3	12	0	-	0	0	.
chr1	210367094	210367095	chr1:210367095:A:G	rs4845008	A	G	a	Sox2_MA0143.3	3	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr1	210400114	210400115	chr1:210400115:T:C	rs73071983	T	C	T	Sox2_MA0143.3	-20	0	+	0	0	.
chr1	210407401	210407402	chr1:210407402:A:C	chr1:210407402:A:C	A	C	A	Sox2_MA0143.3	-16	0	+	0	0	.
chr1	210616575	210616576	chr1:210616576:A:C	rs7541034	A	C	A	Sox2_MA0143.3	27	0	+	0	0	.
chr1	210631717	210631718	chr1:210631718:A:G	rs114036950	A	G	A	Sox2_MA0143.3	3	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr1	210633808	210633809	chr1:210633809:C:T	rs77762608	C	T	C	Sox2_MA0143.3	1	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr1	210633823	210633824	chr1:210633824:G:A	rs151211549	G	A	G	Sox2_MA0143.3	16	0	+	0	0	.
chr1	210634092	210634093	chr1:210634093:A:G	rs3935665	A	G	A	Sox2_MA0143.3	15	0	+	0	0	.
chr1	210657440	210657441	chr1:210657441:G:A	rs115357378	G	A	G	Sox2_MA0143.3	-16	0	-	0	0	.
chr1	210674171	210674172	chr1:210674172:T:A	rs1934615	T	A	A	Sox2_MA0143.3	-6	0	+	0	0	.
chr1	210693112	210693113	chr1:210693113:A:C	chr1:210693113:A:C	A	C	A	Sox2_MA0143.3	-15	0	-	0	0	.
chr1	210757132	210757133	chr1:210757133:T:C	rs76941136	T	C	T	Sox2_MA0143.3	12	0	+	0	0	.
chr1	210757770	210757771	chr1:210757771:C:T	rs12022312	C	T	C	Sox2_MA0143.3	20	0	+	0	0	.
chr1	210994611	210994612	chr1:210994612:T:C	rs12022715	T	C	C	Sox2_MA0143.3	13	0	-	0	0	.
chr1	211354138	211354139	chr1:211354139:G:A	rs4951522	G	A	G	Sox2_MA0143.3	13	0	-	0	0	.
chr1	211470192	211470193	chr1:211470193:G:T	rs367956418	G	T	G	Sox2_MA0143.3	24	0	-	0	0	.
chr1	211470210	211470211	chr1:211470211:A:G	rs76913815	A	G	A	Sox2_MA0143.3	6	1	-	8.676919043985553	1.7681642646703326	CCATTGTG
chr1	211479559	211479560	chr1:211479560:A:C	rs6677230	A	C	A	Sox2_MA0143.3	-18	0	+	0	0	.
chr1	211484291	211484292	chr1:211484292:G:T	rs12135625	G	T	G	Sox2_MA0143.3	8	0	-	0	0	.
chr1	211513468	211513469	chr1:211513469:T:A	rs78660253	T	A	T	Sox2_MA0143.3	11	0	+	0	0	.
chr1	211549691	211549692	chr1:211549692:T:A	rs11584547	T	A	T	Sox2_MA0143.3	-20	0	-	0	0	.
chr1	211574775	211574776	chr1:211574776:C:T	rs7519865	C	T	T	Sox2_MA0143.3	1	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr1	211607344	211607345	chr1:211607345:G:C	rs11806637	G	C	G	Sox2_MA0143.3	16	0	-	0	0	.
chr1	211619917	211619918	chr1:211619918:C:T	rs4345852	C	T	C	Sox2_MA0143.3	23	0	-	0	0	.
chr1	211629631	211629632	chr1:211629632:C:T	rs74750559	C	T	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr1	211638613	211638614	chr1:211638614:G:A	rs10863919	G	A	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr1	211702125	211702126	chr1:211702126:A:C	rs115857088	A	C	A	Sox2_MA0143.3	-1	0	-	0	0	.
chr1	211735887	211735888	chr1:211735888:C:T	rs1157168	C	T	C	Sox2_MA0143.3	18	0	+	0	0	.
chr1	211736898	211736899	chr1:211736899:G:T	rs146754752	G	T	G	Sox2_MA0143.3	5	1	+	9.206767037375712	2.298012258060492	CCTTTGTC
chr1	211893442	211893443	chr1:211893443:G:C	rs2808376	G	C	G	Sox2_MA0143.3	9	0	-	0	0	.
chr1	211929587	211929588	chr1:211929588:G:C	rs12723988	G	C	G	Sox2_MA0143.3	19	0	-	0	0	.
chr1	212035347	212035348	chr1:212035348:G:T	chr1:212035348:G:T	G	T	G	Sox2_MA0143.3	5	1	+	9.206767037375712	2.298012258060492	CCTTTGTC
chr1	212127398	212127399	chr1:212127399:T:C	rs9804001	T	C	T	Sox2_MA0143.3	19	0	-	0	0	.
chr1	212201587	212201588	chr1:212201588:A:G	rs4951578	A	G	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr1	212213778	212213779	chr1:212213779:C:T	rs7533419	C	T	C	Sox2_MA0143.3	27	0	-	0	0	.
chr1	212413393	212413394	chr1:212413394:T:C	rs12403586	T	C	T	Sox2_MA0143.3	-7	0	-	0	0	.
chr1	212440985	212440986	chr1:212440986:T:G	rs508432	T	G	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr1	212459932	212459933	chr1:212459933:C:T	rs6688868	C	T	T	Sox2_MA0143.3	17	0	-	0	0	.
chr1	212479627	212479628	chr1:212479628:T:C	rs12129531	T	C	T	Sox2_MA0143.3	-15	0	+	0	0	.
chr1	212483221	212483222	chr1:212483222:A:G	rs590156	A	G	A	Sox2_MA0143.3	-5	0	+	0	0	.
chr1	212487101	212487102	chr1:212487102:C:T	chr1:212487102:C:T	C	T	C	Sox2_MA0143.3	1	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr1	212488129	212488130	chr1:212488130:C:T	rs12143427	C	T	C	Sox2_MA0143.3	7	1	+	9.206767037375712	9.800647049772198	CCTTTGTC
chr1	212488376	212488377	chr1:212488377:C:T	rs59431921	C	T	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr1	212526034	212526035	chr1:212526035:G:A	rs660813	G	A	A	Sox2_MA0143.3	5	1	+	9.206767037375712	2.298012258060492	CCTTTGTC
chr1	212540367	212540368	chr1:212540368:A:G	rs585428	A	G	G	Sox2_MA0143.3	21	0	+	0	0	.
chr1	212602985	212602986	chr1:212602986:T:C	rs10746435	T	C	T	Sox2_MA0143.3	3	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr1	212668249	212668250	chr1:212668250:T:C	rs112683377	T	C	T	Sox2_MA0143.3	20	0	+	0	0	.
chr1	212668255	212668256	chr1:212668256:C:T	rs17674590	C	T	T	Sox2_MA0143.3	26	0	+	0	0	.
chr1	212682804	212682805	chr1:212682805:G:A	rs35027464	G	A	G	Sox2_MA0143.3	23	0	+	0	0	.
chr1	212699210	212699211	chr1:212699211:T:C	rs28549276	T	C	C	Sox2_MA0143.3	15	0	+	0	0	.
chr1	212750193	212750194	chr1:212750194:G:A	rs55827218	G	A	G	Sox2_MA0143.3	19	0	-	0	0	.
chr1	212922611	212922612	chr1:212922612:G:A	rs6680409	G	A	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr1	212928501	212928502	chr1:212928502:G:A	rs970081	G	A	G	Sox2_MA0143.3	25	0	+	0	0	.
chr1	212966405	212966406	chr1:212966406:T:G	rs3738805	T	G	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr1	212975330	212975331	chr1:212975331:T:C	rs59755371	T	C	T	Sox2_MA0143.3	12	0	-	0	0	.
chr1	213049221	213049222	chr1:213049222:C:T	rs61834077	C	T	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr1	213138083	213138084	chr1:213138084:T:C	rs6657234	T	C	C	Sox2_MA0143.3	3	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr1	213670968	213670969	chr1:213670969:G:C	rs4655456	G	C	G	Sox2_MA0143.3	18	0	-	0	0	.
chr1	213694063	213694064	chr1:213694064:A:G	rs937973	A	G	A	Sox2_MA0143.3	-14	0	+	0	0	.
chr1	213871620	213871621	chr1:213871621:T:C	rs853748	T	C	T	Sox2_MA0143.3	3	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr1	213885091	213885092	chr1:213885092:C:T	rs1048097053	C	T	C	Sox2_MA0143.3	15	0	+	0	0	.
chr1	213905394	213905395	chr1:213905395:C:T	rs114733671	C	T	C	Sox2_MA0143.3	23	0	+	0	0	.
chr1	213983579	213983580	chr1:213983580:C:T	chr1:213983580:C:T	C	T	C	Sox2_MA0143.3	1	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr1	214014829	214014830	chr1:214014830:G:T	rs378414	G	T	T	Sox2_MA0143.3	-17	0	+	0	0	.
chr1	214103110	214103111	chr1:214103111:A:G	rs530193506	A	G	A	Sox2_MA0143.3	23	0	+	0	0	.
chr1	214111811	214111812	chr1:214111812:T:C	rs74139612	T	C	T	Sox2_MA0143.3	19	0	-	0	0	.
chr1	214246714	214246715	chr1:214246715:C:T	rs4655323	C	T	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr1	214259647	214259648	chr1:214259648:G:A	rs143964750	G	A	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr1	214300680	214300681	chr1:214300681:C:T	rs12725062	C	T	C	Sox2_MA0143.3	12	0	+	0	0	.
chr1	214309485	214309486	chr1:214309486:T:A	rs10864093	T	A	T	Sox2_MA0143.3	-14	0	+	0	0	.
chr1	214319252	214319253	chr1:214319253:G:A	rs12059328	G	A	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr1	214370010	214370011	chr1:214370011:C:T	rs1388496325	C	T	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr1	214427865	214427866	chr1:214427866:A:G	rs4655344	A	G	A	Sox2_MA0143.3	-15	0	-	0	0	.
chr1	214493389	214493390	chr1:214493390:T:C	rs74142724	T	C	T	Sox2_MA0143.3	19	0	-	0	0	.
chr1	214603718	214603719	chr1:214603719:T:C	rs536913201	T	C	T	Sox2_MA0143.3	11	0	+	0	0	.
chr1	214665957	214665958	chr1:214665958:G:A	rs335545	G	A	G	Sox2_MA0143.3	14	0	+	0	0	.
chr1	214684062	214684063	chr1:214684063:A:T	rs436869	A	T	A	Sox2_MA0143.3	19	0	+	0	0	.
chr1	214747024	214747025	chr1:214747025:T:C	rs184536230	T	C	T	Sox2_MA0143.3	8	0	+	0	0	.
chr1	214838998	214838999	chr1:214838999:T:C	rs945676	T	C	T	Sox2_MA0143.3	17	0	+	0	0	.
chr1	215023289	215023290	chr1:215023290:A:C	chr1:215023290:A:C	A	C	c	Sox2_MA0143.3	22	0	-	0	0	.
chr1	215023289	215023290	chr1:215023290:A:T	rs2841603	A	T	c	Sox2_MA0143.3	22	0	-	0	0	.
chr1	215269867	215269868	chr1:215269868:C:T	rs12090486	C	T	T	Sox2_MA0143.3	10	0	+	0	0	.
chr1	215724879	215724880	chr1:215724880:G:A	rs17025239	G	A	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr1	215807673	215807674	chr1:215807674:A:G	rs12725398	A	G	A	Sox2_MA0143.3	-17	0	+	0	0	.
chr1	215830766	215830767	chr1:215830767:C:T	rs11120653	C	T	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr1	215865254	215865255	chr1:215865255:A:G	rs17025517	A	G	A	Sox2_MA0143.3	13	0	+	0	0	.
chr1	215887741	215887742	chr1:215887742:T:G	chr1:215887742:T:G	T	G	T	Sox2_MA0143.3	3	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr1	215944497	215944498	chr1:215944498:T:C	rs531780	T	C	T	Sox2_MA0143.3	11	0	+	0	0	.
chr1	216015355	216015356	chr1:216015356:T:G	rs10779662	T	G	T	Sox2_MA0143.3	15	0	+	0	0	.
chr1	216015365	216015366	chr1:216015366:T:C	rs376931217	T	C	T	Sox2_MA0143.3	25	0	+	0	0	.
chr1	216300402	216300403	chr1:216300403:A:G	rs17042212	A	G	A	Sox2_MA0143.3	-3	0	-	0	0	.
chr1	216497552	216497553	chr1:216497553:A:G	rs11584377	A	G	a	Sox2_MA0143.3	-10	0	-	0	0	.
chr1	216517944	216517945	chr1:216517945:A:G	rs6604626	A	G	A	Sox2_MA0143.3	15	0	+	0	0	.
chr1	216539548	216539549	chr1:216539549:C:A	rs6694260	C	A	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr1	216550040	216550041	chr1:216550041:G:A	rs11572795	G	A	G	Sox2_MA0143.3	13	0	+	0	0	.
chr1	216721824	216721825	chr1:216721825:T:C	rs1538527	T	C	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr1	216760995	216760996	chr1:216760996:G:A	rs12755597	G	A	G	Sox2_MA0143.3	5	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr1	216951388	216951389	chr1:216951389:T:C	rs10492957	T	C	T	Sox2_MA0143.3	14	0	-	0	0	.
chr1	217053903	217053904	chr1:217053904:T:C	rs17045087	T	C	T	Sox2_MA0143.3	-4	0	-	0	0	.
chr1	217212801	217212802	chr1:217212802:T:C	rs10429948	T	C	C	Sox2_MA0143.3	7	1	+	9.613475778572903	9.019595766176417	CCATTGTT
chr1	217251467	217251468	chr1:217251468:T:C	rs3923328	T	C	T	Sox2_MA0143.3	-7	0	-	0	0	.
chr1	217252356	217252357	chr1:217252357:G:A	rs4258274	G	A	A	Sox2_MA0143.3	16	0	+	0	0	.
chr1	217798650	217798651	chr1:217798651:A:G	rs6604562	A	G	G	Sox2_MA0143.3	10	0	+	0	0	.
chr1	217835683	217835684	chr1:217835684:G:C	rs56106465	G	C	G	Sox2_MA0143.3	5	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr1	217946193	217946194	chr1:217946194:G:A	rs2001585	G	A	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr1	218034626	218034627	chr1:218034627:C:T	rs1490333	C	T	C	Sox2_MA0143.3	16	0	+	0	0	.
chr1	218064068	218064069	chr1:218064069:C:T	rs12405427	C	T	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr1	218164212	218164213	chr1:218164213:T:A	rs6659344	T	A	T	Sox2_MA0143.3	-18	0	+	0	0	.
chr1	218164221	218164222	chr1:218164222:C:T	chr1:218164222:C:T	C	T	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr1	218182645	218182646	chr1:218182646:A:C	rs144122575	A	C	A	Sox2_MA0143.3	-14	0	-	0	0	.
chr1	218249564	218249565	chr1:218249565:T:G	rs78245648	T	G	T	Sox2_MA0143.3	-3	0	+	0	0	.
chr1	218306220	218306221	chr1:218306221:G:T	rs12076064	G	T	G	Sox2_MA0143.3	7	1	-	9.206767037375712	3.5547341015215945	CCTTTGTC
chr1	218349682	218349683	chr1:218349683:A:G	rs17047682	A	G	A	Sox2_MA0143.3	10	0	+	0	0	.
chr1	218350980	218350981	chr1:218350981:A:T	rs187951635	A	T	A	Sox2_MA0143.3	-16	0	+	0	0	.
chr1	218372481	218372482	chr1:218372482:A:G	rs150089069	A	G	A	Sox2_MA0143.3	9	0	+	0	0	.
chr1	218389365	218389366	chr1:218389366:C:T	rs12405215	C	T	C	Sox2_MA0143.3	23	0	-	0	0	.
chr1	218558058	218558059	chr1:218558059:G:A	rs76275785	G	A	G	Sox2_MA0143.3	22	0	-	0	0	.
chr1	218677368	218677369	chr1:218677369:G:A	rs7544325	G	A	A	Sox2_MA0143.3	-2	0	-	0	0	.
chr1	218848878	218848879	chr1:218848879:T:C	rs36095120	T	C	T	Sox2_MA0143.3	-18	0	-	0	0	.
chr1	218853070	218853071	chr1:218853071:G:T	rs12045869	G	T	G	Sox2_MA0143.3	17	0	-	0	0	.
chr1	218870604	218870605	chr1:218870605:C:A	rs12043466	C	A	C	Sox2_MA0143.3	19	0	+	0	0	.
chr1	218985592	218985593	chr1:218985593:A:G	rs11118189	A	G	g	Sox2_MA0143.3	15	0	-	0	0	.
chr1	219049159	219049160	chr1:219049160:A:G	rs1256682	A	G	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr1	219297445	219297446	chr1:219297446:G:C	rs12076054	G	C	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr1	219309173	219309174	chr1:219309174:T:G	rs6688793	T	G	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr1	219380663	219380664	chr1:219380664:A:G	rs74351907	A	G	G	Sox2_MA0143.3	6	1	-	8.676919043985553	1.7681642646703326	CCATTGTG
chr1	219448729	219448730	chr1:219448730:T:A	rs11118304	T	A	T	Sox2_MA0143.3	22	0	-	0	0	.
chr1	219561133	219561134	chr1:219561134:C:T	rs79203391	C	T	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr1	219635831	219635832	chr1:219635832:G:A	rs76930186	G	A	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr1	219669248	219669249	chr1:219669249:C:T	rs1416000	C	T	C	Sox2_MA0143.3	16	0	+	0	0	.
chr1	219693199	219693200	chr1:219693200:A:G	rs12138850	A	G	A	Sox2_MA0143.3	14	0	+	0	0	.
chr1	219693201	219693202	chr1:219693202:A:G	rs12088372	A	G	G	Sox2_MA0143.3	16	0	+	0	0	.
chr1	219701764	219701765	chr1:219701765:G:A	rs112047095	G	A	G	Sox2_MA0143.3	8	0	-	0	0	.
chr1	219703444	219703445	chr1:219703445:C:T	rs61836263	C	T	C	Sox2_MA0143.3	18	0	+	0	0	.
chr1	219752997	219752998	chr1:219752998:C:T	rs12021595	C	T	C	Sox2_MA0143.3	22	0	+	0	0	.
chr1	219791529	219791530	chr1:219791530:G:A	rs7537543	G	A	G	Sox2_MA0143.3	20	0	-	0	0	.
chr1	219834681	219834682	chr1:219834682:T:C	rs1891561	T	C	C	Sox2_MA0143.3	12	0	-	0	0	.
chr1	220014529	220014530	chr1:220014530:A:T	rs6541120	A	T	A	Sox2_MA0143.3	3	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr1	220094675	220094676	chr1:220094676:G:A	rs146293670	G	A	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr1	220274315	220274316	chr1:220274316:G:A	rs3814345	G	A	G	Sox2_MA0143.3	18	0	+	0	0	.
chr1	220425929	220425930	chr1:220425930:G:T	rs60224244	G	T	T	Sox2_MA0143.3	-7	0	+	0	0	.
chr1	220487614	220487615	chr1:220487615:G:T	rs76902009	G	T	g	Sox2_MA0143.3	27	0	+	0	0	.
chr1	220570943	220570944	chr1:220570944:A:G	rs2244448	A	G	A	Sox2_MA0143.3	-16	0	+	0	0	.
chr1	220595440	220595441	chr1:220595441:G:A	rs1372148271	G	A	G	Sox2_MA0143.3	-9	0	+	0	0	.
chr1	220700758	220700759	chr1:220700759:A:G	rs426020	A	G	g	Sox2_MA0143.3	18	0	-	0	0	.
chr1	220706514	220706515	chr1:220706515:T:C	rs774132	T	C	c	Sox2_MA0143.3	-18	0	-	0	0	.
chr1	220763225	220763226	chr1:220763226:G:A	rs11118597	G	A	A	Sox2_MA0143.3	22	0	+	0	0	.
chr1	220764885	220764886	chr1:220764886:G:A	rs365398	G	A	A	Sox2_MA0143.3	9	0	+	0	0	.
chr1	220783743	220783744	chr1:220783744:C:T	rs12039436	C	T	T	Sox2_MA0143.3	-19	0	-	0	0	.
chr1	221218672	221218673	chr1:221218673:A:G	rs148953886	A	G	A	Sox2_MA0143.3	4	1	-	8.676919043985553	1.7681642646703322	CCATTGTG
chr1	221439168	221439169	chr1:221439169:G:A	rs12064492	G	A	G	Sox2_MA0143.3	24	0	-	0	0	.
chr1	221481185	221481186	chr1:221481186:G:T	rs6694450	G	T	G	Sox2_MA0143.3	5	1	+	9.206767037375712	2.298012258060492	CCTTTGTC
chr1	221574505	221574506	chr1:221574506:A:T	rs12032922	A	T	T	Sox2_MA0143.3	25	0	+	0	0	.
chr1	221734473	221734474	chr1:221734474:C:T	rs11118841	C	T	C	Sox2_MA0143.3	23	0	+	0	0	.
chr1	221795191	221795192	chr1:221795192:C:T	rs4403637	C	T	T	Sox2_MA0143.3	18	0	-	0	0	.
chr1	221832863	221832864	chr1:221832864:G:A	rs3922653	G	A	G	Sox2_MA0143.3	-14	0	+	0	0	.
chr1	222068345	222068346	chr1:222068346:G:A	rs7548749	G	A	A	Sox2_MA0143.3	23	0	+	0	0	.
chr1	222104320	222104321	chr1:222104321:T:C	rs6698779	T	C	C	Sox2_MA0143.3	6	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr1	222294528	222294529	chr1:222294529:G:T	rs964070	G	T	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr1	222415963	222415964	chr1:222415964:T:C	rs116124097	T	C	T	Sox2_MA0143.3	12	0	-	0	0	.
chr1	222444363	222444364	chr1:222444364:G:A	rs72734186	G	A	G	Sox2_MA0143.3	18	0	-	0	0	.
chr1	222644456	222644457	chr1:222644457:C:T	rs17531007	C	T	C	Sox2_MA0143.3	22	0	-	0	0	.
chr1	222644486	222644487	chr1:222644487:A:C	rs972514256	A	C	A	Sox2_MA0143.3	-8	0	-	0	0	.
chr1	222691206	222691207	chr1:222691207:G:A	rs145478752	G	A	G	Sox2_MA0143.3	24	0	-	0	0	.
chr1	222710324	222710325	chr1:222710325:A:C	rs150723420	A	C	A	Sox2_MA0143.3	27	0	-	0	0	.
chr1	222710472	222710473	chr1:222710473:A:G	rs17466896	A	G	A	Sox2_MA0143.3	9	0	+	0	0	.
chr1	222769357	222769358	chr1:222769358:A:G	rs74145552	A	G	A	Sox2_MA0143.3	20	0	-	0	0	.
chr1	222818348	222818349	chr1:222818349:A:G	rs4609435	A	G	G	Sox2_MA0143.3	16	0	+	0	0	.
chr1	222846734	222846735	chr1:222846735:C:G	rs67787140	C	G	c	Sox2_MA0143.3	0	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr1	222897574	222897575	chr1:222897575:G:A	rs2789977	G	A	A	Sox2_MA0143.3	8	0	+	0	0	.
chr1	222919160	222919161	chr1:222919161:T:C	rs2609393	T	C	C	Sox2_MA0143.3	20	0	-	0	0	.
chr1	222948549	222948550	chr1:222948550:C:G	rs80067453	C	G	C	Sox2_MA0143.3	11	0	-	0	0	.
chr1	223007077	223007078	chr1:223007078:G:A	rs36129150	G	A	G	Sox2_MA0143.3	26	0	+	0	0	.
chr1	223022784	223022785	chr1:223022785:C:T	rs1001137689	C	T	C	Sox2_MA0143.3	1	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr1	223040315	223040316	chr1:223040316:A:C	rs1416690	A	C	C	Sox2_MA0143.3	27	0	+	0	0	.
chr1	223305232	223305233	chr1:223305233:G:A	rs34283624	G	A	G	Sox2_MA0143.3	18	0	+	0	0	.
chr1	223320114	223320115	chr1:223320115:T:C	rs78320044	T	C	T	Sox2_MA0143.3	10	0	+	0	0	.
chr1	223410363	223410364	chr1:223410364:T:C	chr1:223410364:T:C	T	C	T	Sox2_MA0143.3	2	1	-	8.676919043985553	2.5582713367092715	CCATTGTG
chr1	223462446	223462447	chr1:223462447:G:C	rs1199204787	G	C	G	Sox2_MA0143.3	-5	0	+	0	0	.
chr1	223500775	223500776	chr1:223500776:G:T	rs570011122	G	T	g	Sox2_MA0143.3	-3	0	+	0	0	.
chr1	223500797	223500798	chr1:223500798:T:C	rs6661598	T	C	T	Sox2_MA0143.3	19	0	+	0	0	.
chr1	223532080	223532081	chr1:223532081:T:C	rs78820727	T	C	T	Sox2_MA0143.3	-13	0	+	0	0	.
chr1	223622452	223622453	chr1:223622453:A:C	rs75296449	A	C	.	Sox2_MA0143.3	8	0	+	0	0	.
chr1	223628619	223628620	chr1:223628620:A:G	rs66602040	A	G	g	Sox2_MA0143.3	21	0	-	0	0	.
chr1	223628644	223628645	chr1:223628645:A:G	rs61825210	A	G	t	Sox2_MA0143.3	-4	0	-	0	0	.
chr1	223700823	223700824	chr1:223700824:A:G	chr1:223700824:A:G	A	G	A	Sox2_MA0143.3	-13	0	-	0	0	.
chr1	223753481	223753482	chr1:223753482:C:G	rs4653775	C	G	C	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr1	223838434	223838435	chr1:223838435:T:C	rs1890120	T	C	T	Sox2_MA0143.3	-13	0	-	0	0	.
chr1	223993207	223993208	chr1:223993208:T:G	rs71644763	T	G	-	Sox2_MA0143.3	6	1	+	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr1	224054788	224054789	chr1:224054789:A:G	rs10753439	A	G	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr1	224064334	224064335	chr1:224064335:C:T	rs12731770	C	T	C	Sox2_MA0143.3	18	0	-	0	0	.
chr1	224080277	224080278	chr1:224080278:A:G	rs116550680	A	G	A	Sox2_MA0143.3	11	0	-	0	0	.
chr1	224080296	224080297	chr1:224080297:T:C	rs6699110	T	C	T	Sox2_MA0143.3	-8	0	-	0	0	.
chr1	224116251	224116252	chr1:224116252:G:C	rs3767728	G	C	G	Sox2_MA0143.3	16	0	+	0	0	.
chr1	224198957	224198958	chr1:224198958:C:T	rs6666295	C	T	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr1	224240558	224240559	chr1:224240559:C:T	rs4654009	C	T	T	Sox2_MA0143.3	-16	0	+	0	0	.
chr1	224256789	224256790	chr1:224256790:G:A	rs183000837	G	A	g	Sox2_MA0143.3	14	0	+	0	0	.
chr1	224357501	224357502	chr1:224357502:A:C	rs945131517	A	C	A	Sox2_MA0143.3	-7	0	+	0	0	.
chr1	224451080	224451081	chr1:224451081:T:G	rs1317205	T	G	T	Sox2_MA0143.3	6	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr1	224627906	224627907	chr1:224627907:G:A	rs12564263	G	A	G	Sox2_MA0143.3	-2	0	+	0	0	.
chr1	224795654	224795655	chr1:224795655:G:A	rs2802564	G	A	G	Sox2_MA0143.3	-11	0	+	0	0	.
chr1	224879624	224879625	chr1:224879625:C:A	rs77844670	C	A	C	Sox2_MA0143.3	7	1	+	9.206767037375712	3.5547341015215945	CCTTTGTC
chr1	224879628	224879629	chr1:224879629:C:T	rs2051158	C	T	T	Sox2_MA0143.3	11	0	+	0	0	.
chr1	225229070	225229071	chr1:225229071:G:T	rs622158	G	T	g	Sox2_MA0143.3	-8	0	+	0	0	.
chr1	225319375	225319376	chr1:225319376:A:G	rs12757500	A	G	a	Sox2_MA0143.3	3	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr1	225321009	225321010	chr1:225321010:C:T	rs648011	C	T	t	Sox2_MA0143.3	-17	0	+	0	0	.
chr1	225356126	225356127	chr1:225356127:C:A	rs34809641	C	A	c	Sox2_MA0143.3	-11	0	-	0	0	.
chr1	225427611	225427612	chr1:225427612:C:T	rs375293024	C	T	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr1	225438251	225438252	chr1:225438252:G:C	rs78492257	G	C	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr1	225445194	225445195	chr1:225445195:C:T	rs187003060	C	T	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr1	225652666	225652667	chr1:225652667:C:G	rs970996677	C	G	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr1	225695751	225695752	chr1:225695752:A:C	rs1269319603	A	C	A	Sox2_MA0143.3	-17	0	-	0	0	.
chr1	225700653	225700654	chr1:225700654:C:T	rs2794393	C	T	C	Sox2_MA0143.3	26	0	-	0	0	.
chr1	225708231	225708232	chr1:225708232:G:T	rs6426083	G	T	G	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr1	225757676	225757677	chr1:225757677:A:C	rs12141610	A	C	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr1	225773681	225773682	chr1:225773682:A:G	rs12403575	A	G	A	Sox2_MA0143.3	23	0	-	0	0	.
chr1	225778327	225778328	chr1:225778328:G:A	rs116293746	G	A	G	Sox2_MA0143.3	-12	0	+	0	0	.
chr1	225778332	225778333	chr1:225778333:T:G	rs57153082	T	G	T	Sox2_MA0143.3	-7	0	+	0	0	.
chr1	225800639	225800640	chr1:225800640:T:C	rs61837991	T	C	t	Sox2_MA0143.3	-4	0	+	0	0	.
chr1	225891214	225891215	chr1:225891215:A:G	rs4653437	A	G	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr1	225922542	225922543	chr1:225922543:G:A	rs10915898	G	A	G	Sox2_MA0143.3	-5	0	+	0	0	.
chr1	226049010	226049011	chr1:226049011:T:C	rs6675606	T	C	c	Sox2_MA0143.3	24	0	+	0	0	.
chr1	226062630	226062631	chr1:226062631:C:T	rs1044056906	C	T	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr1	226098418	226098419	chr1:226098419:T:C	rs11576652	T	C	T	Sox2_MA0143.3	20	0	-	0	0	.
chr1	226119117	226119118	chr1:226119118:C:T	rs141381648	C	T	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr1	226184226	226184227	chr1:226184227:G:A	rs74229317	G	A	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr1	226354524	226354525	chr1:226354525:T:C	rs758039988	T	C	T	Sox2_MA0143.3	-2	0	+	0	0	.
chr1	226373846	226373847	chr1:226373847:A:G	rs907191	A	G	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr1	226379470	226379471	chr1:226379471:A:C	rs2271345	A	C	A	Sox2_MA0143.3	-8	0	-	0	0	.
chr1	226379861	226379862	chr1:226379862:C:G	rs2271343	C	G	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr1	226419714	226419715	chr1:226419715:G:A	rs6665016	G	A	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr1	226452975	226452976	chr1:226452976:T:C	rs11580815	T	C	C	Sox2_MA0143.3	2	1	+	9.800647049772198	3.494828071296623	CCTTTGTT
chr1	226560849	226560850	chr1:226560850:T:C	rs659975	T	C	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr1	226560861	226560862	chr1:226560862:T:C	rs659989	T	C	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr1	226577631	226577632	chr1:226577632:A:G	rs986303034	A	G	A	Sox2_MA0143.3	-19	0	+	0	0	.
chr1	226656759	226656760	chr1:226656760:C:T	rs1007975829	C	T	C	Sox2_MA0143.3	14	0	+	0	0	.
chr1	226702546	226702547	chr1:226702547:C:T	rs139253224	C	T	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr1	226709142	226709143	chr1:226709143:G:C	rs3845510	G	C	C	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr1	226810335	226810336	chr1:226810336:G:A	rs76594948	G	A	G	Sox2_MA0143.3	0	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr1	226863661	226863662	chr1:226863662:A:G	rs58698650	A	G	G	Sox2_MA0143.3	6	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr1	226902228	226902229	chr1:226902229:G:C	rs6685659	G	C	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr1	226942547	226942548	chr1:226942548:G:A	rs142915075	G	A	G	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr1	226975685	226975686	chr1:226975686:C:G	rs779760720	C	G	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr1	227026696	227026697	chr1:227026697:A:G	rs7549464	A	G	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr1	227026697	227026698	chr1:227026698:A:C	rs7549465	A	C	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr1	227071325	227071326	chr1:227071326:A:G	rs11808884	A	G	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr1	227264113	227264114	chr1:227264114:T:G	rs4354510	T	G	T	Sox2_MA0143.3	14	0	+	0	0	.
chr1	227266176	227266177	chr1:227266177:C:T	rs1015816	C	T	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr1	227312773	227312774	chr1:227312774:A:G	rs7556319	A	G	A	Sox2_MA0143.3	-16	0	+	0	0	.
chr1	227378432	227378433	chr1:227378433:G:T	rs10916134	G	T	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr1	227429075	227429076	chr1:227429076:C:T	rs1279521819	C	T	C	Sox2_MA0143.3	21	0	-	0	0	.
chr1	227541046	227541047	chr1:227541047:G:A	rs1178594523	G	A	G	Sox2_MA0143.3	15	0	-	0	0	.
chr1	227559416	227559417	chr1:227559417:C:A	rs140351209	C	A	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr1	227563564	227563565	chr1:227563565:G:C	rs117098396	G	C	G	Sox2_MA0143.3	10	0	+	0	0	.
chr1	227627851	227627852	chr1:227627852:C:G	rs78176468	C	G	-	Sox2_MA0143.3	-17	0	-	0	0	.
chr1	227632058	227632059	chr1:227632059:C:T	rs10799432	C	T	-	Sox2_MA0143.3	12	0	-	0	0	.
chr1	227771715	227771716	chr1:227771716:C:T	rs6683757	C	T	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr1	227783509	227783510	chr1:227783510:T:C	rs4653872	T	C	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr1	227828668	227828669	chr1:227828669:A:G	rs1582114	A	G	G	Sox2_MA0143.3	7	1	-	9.800647049772198	9.206767037375712	CCTTTGTT
chr1	227892345	227892346	chr1:227892346:A:G	rs67645046	A	G	A	Sox2_MA0143.3	8	0	+	0	0	.
chr1	227919329	227919330	chr1:227919330:G:A	rs4266877	G	A	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr1	227941864	227941865	chr1:227941865:G:A	rs540935269	G	A	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr1	227945796	227945797	chr1:227945797:T:C	rs141158848	T	C	t	Sox2_MA0143.3	3	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr1	227990872	227990873	chr1:227990873:A:G	rs75432446	A	G	G	Sox2_MA0143.3	9	0	-	0	0	.
chr1	228002153	228002154	chr1:228002154:T:C	rs708108	T	C	C	Sox2_MA0143.3	11	0	-	0	0	.
chr1	228043593	228043594	chr1:228043594:T:C	rs149187715	T	C	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr1	228046102	228046103	chr1:228046103:A:C	rs73110782	A	C	A	Sox2_MA0143.3	23	0	-	0	0	.
chr1	228087969	228087970	chr1:228087970:T:A	rs78044256	T	A	T	Sox2_MA0143.3	-14	0	+	0	0	.
chr1	228087982	228087983	chr1:228087983:G:A	rs114719657	G	A	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr1	228089821	228089822	chr1:228089822:A:G	rs116438423	A	G	A	Sox2_MA0143.3	-8	0	-	0	0	.
chr1	228120121	228120122	chr1:228120122:A:G	rs1300941813	A	G	A	Sox2_MA0143.3	17	0	+	0	0	.
chr1	228237852	228237853	chr1:228237853:A:G	rs2792984	A	G	G	Sox2_MA0143.3	-5	0	+	0	0	.
chr1	228314294	228314295	chr1:228314295:G:A	rs287616	G	A	G	Sox2_MA0143.3	16	0	+	0	0	.
chr1	228359229	228359230	chr1:228359230:A:G	rs12061490	A	G	A	Sox2_MA0143.3	13	0	-	0	0	.
chr1	228360199	228360200	chr1:228360200:C:T	rs12035900	C	T	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr1	228380457	228380458	chr1:228380458:T:C	rs12760907	T	C	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr1	228445791	228445792	chr1:228445792:G:C	rs16848618	G	C	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr1	228469620	228469621	chr1:228469621:C:A	rs539025781	C	A	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr1	228469754	228469755	chr1:228469755:G:A	rs6667617	G	A	G	Sox2_MA0143.3	15	0	-	0	0	.
chr1	228469755	228469756	chr1:228469756:C:A	rs6692594	C	A	C	Sox2_MA0143.3	14	0	-	0	0	.
chr1	228474757	228474758	chr1:228474758:G:A	rs1049227186	G	A	G	Sox2_MA0143.3	23	0	-	0	0	.
chr1	228489122	228489123	chr1:228489123:C:T	rs12034519	C	T	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr1	228493493	228493494	chr1:228493494:C:T	rs3795816	C	T	C	Sox2_MA0143.3	7	1	-	8.864090315184848	3.5547341015215945	CCTTTGTG
chr1	228734916	228734917	chr1:228734917:C:T	rs3806285	C	T	C	Sox2_MA0143.3	5	1	-	8.676919043985553	1.7681642646703324	CCATTGTG
chr1	228735564	228735565	chr1:228735565:G:A	rs981854880	G	A	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr1	228768921	228768922	chr1:228768922:G:T	rs145023758	G	T	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr1	228821572	228821573	chr1:228821573:G:T	rs241341	G	T	G	Sox2_MA0143.3	16	0	-	0	0	.
chr1	228945086	228945087	chr1:228945087:C:T	rs60199323	C	T	.	Sox2_MA0143.3	-17	0	-	0	0	.
chr1	228949106	228949107	chr1:228949107:A:T	rs2100689	A	T	.	Sox2_MA0143.3	19	0	+	0	0	.
chr1	228953818	228953819	chr1:228953819:C:T	rs769505279	C	T	.	Sox2_MA0143.3	25	0	+	0	0	.
chr1	228970447	228970448	chr1:228970448:G:A	rs778381	G	A	G	Sox2_MA0143.3	9	0	+	0	0	.
chr1	229003456	229003457	chr1:229003457:G:A	rs73106779	G	A	G	Sox2_MA0143.3	-11	0	+	0	0	.
chr1	229006657	229006658	chr1:229006658:G:A	rs192606562	G	A	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr1	229072675	229072676	chr1:229072676:A:C	rs508342	A	C	C	Sox2_MA0143.3	3	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr1	229075603	229075604	chr1:229075604:A:G	rs528675	A	G	G	Sox2_MA0143.3	7	1	-	9.800647049772198	9.206767037375712	CCTTTGTT
chr1	229086846	229086847	chr1:229086847:A:G	rs6672803	A	G	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr1	229131691	229131692	chr1:229131692:C:A	rs557423314	C	A	C	Sox2_MA0143.3	18	0	-	0	0	.
chr1	229172103	229172104	chr1:229172104:T:G	rs530525253	T	G	T	Sox2_MA0143.3	-7	0	+	0	0	.
chr1	229175060	229175061	chr1:229175061:A:G	rs600413	A	G	-	Sox2_MA0143.3	-7	0	-	0	0	.
chr1	229225707	229225708	chr1:229225708:C:T	rs12084426	C	T	c	Sox2_MA0143.3	13	0	-	0	0	.
chr1	229230061	229230062	chr1:229230062:C:A	chr1:229230062:C:A	C	A	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr1	229337594	229337595	chr1:229337595:A:G	rs4411159	A	G	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr1	229563326	229563327	chr1:229563327:G:A	rs17584853	G	A	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr1	229596970	229596971	chr1:229596971:C:T	rs3820358	C	T	T	Sox2_MA0143.3	18	0	-	0	0	.
chr1	229758447	229758448	chr1:229758448:G:A	rs584728	G	A	G	Sox2_MA0143.3	8	0	+	0	0	.
chr1	229978115	229978116	chr1:229978116:A:T	rs60526955	A	T	A	Sox2_MA0143.3	-17	0	-	0	0	.
chr1	230055270	230055271	chr1:230055271:A:G	rs11585540	A	G	G	Sox2_MA0143.3	20	0	+	0	0	.
chr1	230161682	230161683	chr1:230161683:T:G	rs2281720	T	G	T	Sox2_MA0143.3	12	0	+	0	0	.
chr1	230277089	230277090	chr1:230277090:G:C	rs7529464	G	C	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr1	230328907	230328908	chr1:230328908:A:T	rs75903916	A	T	A	Sox2_MA0143.3	-3	0	-	0	0	.
chr1	230375935	230375936	chr1:230375936:G:A	rs148529276	G	A	G	Sox2_MA0143.3	21	0	+	0	0	.
chr1	230392726	230392727	chr1:230392727:G:A	rs141148395	G	A	G	Sox2_MA0143.3	26	0	-	0	0	.
chr1	230510006	230510007	chr1:230510007:A:T	rs189878039	A	T	A	Sox2_MA0143.3	-15	0	-	0	0	.
chr1	230611239	230611240	chr1:230611240:C:G	rs12058420	C	G	G	Sox2_MA0143.3	13	0	+	0	0	.
chr1	230672499	230672500	chr1:230672500:C:T	rs12143647	C	T	C	Sox2_MA0143.3	27	0	+	0	0	.
chr1	230679629	230679630	chr1:230679630:T:C	rs943579	T	C	T	Sox2_MA0143.3	-11	0	+	0	0	.
chr1	230743881	230743882	chr1:230743882:C:G	rs1983900	C	G	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr1	230831527	230831528	chr1:230831528:G:A	rs35419511	G	A	G	Sox2_MA0143.3	-3	0	+	0	0	.
chr1	230849736	230849737	chr1:230849737:G:T	rs77499324	G	T	G	Sox2_MA0143.3	12	0	-	0	0	.
chr1	230849747	230849748	chr1:230849748:G:A	rs74144849	G	A	G	Sox2_MA0143.3	1	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr1	230971829	230971830	chr1:230971830:C:T	rs3924318	C	T	C	Sox2_MA0143.3	9	0	-	0	0	.
chr1	230977047	230977048	chr1:230977048:C:T	rs13374343	C	T	T	Sox2_MA0143.3	-1	0	-	0	0	.
chr1	230987207	230987208	chr1:230987208:G:C	rs75387019	G	C	G	Sox2_MA0143.3	19	0	-	0	0	.
chr1	231013930	231013931	chr1:231013931:T:A	rs12033207	T	A	A	Sox2_MA0143.3	25	0	+	0	0	.
chr1	231077175	231077176	chr1:231077176:G:A	rs56849658	G	A	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr1	231077198	231077199	chr1:231077199:G:A	rs11122224	G	A	G	Sox2_MA0143.3	17	0	+	0	0	.
chr1	231077203	231077204	chr1:231077204:A:G	rs12125991	A	G	G	Sox2_MA0143.3	22	0	+	0	0	.
chr1	231109227	231109228	chr1:231109228:G:A	rs74143551	G	A	A	Sox2_MA0143.3	0	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr1	231187592	231187593	chr1:231187593:A:G	rs16853942	A	G	A	Sox2_MA0143.3	15	0	+	0	0	.
chr1	231333267	231333268	chr1:231333268:G:A	rs183028638	G	A	.	Sox2_MA0143.3	8	0	-	0	0	.
chr1	231395228	231395229	chr1:231395229:T:C	rs76705411	T	C	T	Sox2_MA0143.3	15	0	+	0	0	.
chr1	231411124	231411125	chr1:231411125:A:C	rs2491414	A	C	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr1	231411143	231411144	chr1:231411144:T:C	rs2491415	T	C	T	Sox2_MA0143.3	4	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr1	231420813	231420814	chr1:231420814:G:A	rs918418442	G	A	G	Sox2_MA0143.3	1	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr1	231518789	231518790	chr1:231518790:A:G	rs11576167	A	G	A	Sox2_MA0143.3	11	0	-	0	0	.
chr1	231681162	231681163	chr1:231681163:C:T	rs76251010	C	T	C	Sox2_MA0143.3	26	0	-	0	0	.
chr1	231918824	231918825	chr1:231918825:A:G	rs6687338	A	G	A	Sox2_MA0143.3	-10	0	-	0	0	.
chr1	231924299	231924300	chr1:231924300:C:G	rs200396348	C	G	C	Sox2_MA0143.3	16	0	+	0	0	.
chr1	231924450	231924451	chr1:231924451:C:T	rs142775195	C	T	C	Sox2_MA0143.3	8	0	+	0	0	.
chr1	232038426	232038427	chr1:232038427:T:C	rs9729179	T	C	C	Sox2_MA0143.3	-12	0	-	0	0	.
chr1	232049593	232049594	chr1:232049594:C:G	rs76809207	C	G	C	Sox2_MA0143.3	20	0	+	0	0	.
chr1	232111015	232111016	chr1:232111016:G:A	rs13313024	G	A	A	Sox2_MA0143.3	22	0	+	0	0	.
chr1	232132536	232132537	chr1:232132537:C:T	rs11122430	C	T	T	Sox2_MA0143.3	-1	0	+	0	0	.
chr1	232140459	232140460	chr1:232140460:G:A	rs12078605	G	A	G	Sox2_MA0143.3	16	0	-	0	0	.
chr1	232160569	232160570	chr1:232160570:G:A	rs16856541	G	A	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr1	232196246	232196247	chr1:232196247:A:G	rs12126387	A	G	A	Sox2_MA0143.3	15	0	+	0	0	.
chr1	232307304	232307305	chr1:232307305:G:A	rs16856780	G	A	G	Sox2_MA0143.3	5	1	+	9.019595766176417	2.110840986861197	CCATTGTC
chr1	232307316	232307317	chr1:232307317:T:C	rs55798110	T	C	T	Sox2_MA0143.3	17	0	+	0	0	.
chr1	232333288	232333289	chr1:232333289:G:A	rs11587490	G	A	G	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr1	232355836	232355837	chr1:232355837:T:G	rs12404659	T	G	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr1	232394723	232394724	chr1:232394724:C:T	rs789356	C	T	C	Sox2_MA0143.3	1	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr1	232429137	232429138	chr1:232429138:G:C	rs61823570	G	C	g	Sox2_MA0143.3	1	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr1	232453694	232453695	chr1:232453695:G:A	rs76139782	G	A	G	Sox2_MA0143.3	1	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr1	232566411	232566412	chr1:232566412:G:A	rs2247872	G	A	A	Sox2_MA0143.3	-17	0	-	0	0	.
chr1	232576713	232576714	chr1:232576714:A:G	rs1285675	A	G	A	Sox2_MA0143.3	-1	0	-	0	0	.
chr1	232594250	232594251	chr1:232594251:C:T	rs11808073	C	T	C	Sox2_MA0143.3	-5	0	-	0	0	.
chr1	232600684	232600685	chr1:232600685:T:C	rs141717875	T	C	T	Sox2_MA0143.3	2	1	-	9.613475778572903	3.494828071296623	CCATTGTT
chr1	232632781	232632782	chr1:232632782:C:T	rs572806172	C	T	C	Sox2_MA0143.3	10	0	-	0	0	.
chr1	232641715	232641716	chr1:232641716:C:G	rs1931596	C	G	C	Sox2_MA0143.3	14	0	-	0	0	.
chr1	232749257	232749258	chr1:232749258:T:C	rs2795413	T	C	t	Sox2_MA0143.3	19	0	+	0	0	.
chr1	232929416	232929417	chr1:232929417:G:A	rs9424504	G	A	A	Sox2_MA0143.3	5	1	+	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr1	232945044	232945045	chr1:232945045:C:G	rs9424630	C	G	C	Sox2_MA0143.3	1	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr1	232952063	232952064	chr1:232952064:T:A	rs10797597	T	A	T	Sox2_MA0143.3	-18	0	+	0	0	.
chr1	233079768	233079769	chr1:233079769:C:T	rs6683352	C	T	T	Sox2_MA0143.3	10	0	+	0	0	.
chr1	233191424	233191425	chr1:233191425:A:G	rs12047926	A	G	G	Sox2_MA0143.3	4	1	-	8.864090315184848	1.9553355358696274	CCTTTGTG
chr1	233261520	233261521	chr1:233261521:G:A	rs10489808	G	A	G	Sox2_MA0143.3	23	0	-	0	0	.
chr1	233273951	233273952	chr1:233273952:C:T	rs11587411	C	T	T	Sox2_MA0143.3	0	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr1	233282172	233282173	chr1:233282173:A:C	chr1:233282173:A:C	A	C	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr1	233439983	233439984	chr1:233439984:C:T	rs79673854	C	T	C	Sox2_MA0143.3	12	0	-	0	0	.
chr1	233624171	233624172	chr1:233624172:T:C	rs701213	T	C	C	Sox2_MA0143.3	9	0	-	0	0	.
chr1	233624192	233624193	chr1:233624193:C:T	rs701214	C	T	C	Sox2_MA0143.3	-12	0	-	0	0	.
chr1	233641856	233641857	chr1:233641857:A:G	rs4649344	A	G	A	Sox2_MA0143.3	9	0	-	0	0	.
chr1	233959119	233959120	chr1:233959120:A:G	rs10910315	A	G	A	Sox2_MA0143.3	-5	0	+	0	0	.
chr1	233959129	233959130	chr1:233959130:G:A	rs10910316	G	A	G	Sox2_MA0143.3	5	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr1	234229339	234229340	chr1:234229340:T:G	rs10797533	T	G	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr1	234247561	234247562	chr1:234247562:A:G	rs28548858	A	G	-	Sox2_MA0143.3	-19	0	+	0	0	.
chr1	234247813	234247814	chr1:234247814:C:G	rs12077331	C	G	-	Sox2_MA0143.3	9	0	+	0	0	.
chr1	234248308	234248309	chr1:234248309:C:G	rs111511890	C	G	-	Sox2_MA0143.3	0	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr1	234517652	234517653	chr1:234517653:G:A	rs933792866	G	A	G	Sox2_MA0143.3	8	0	-	0	0	.
chr1	234528307	234528308	chr1:234528308:C:G	rs189549513	C	G	C	Sox2_MA0143.3	10	0	+	0	0	.
chr1	234536049	234536050	chr1:234536050:C:T	rs919984185	C	T	C	Sox2_MA0143.3	8	0	-	0	0	.
chr1	234536059	234536060	chr1:234536060:C:T	rs116029372	C	T	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr1	234553162	234553163	chr1:234553163:C:T	rs72767210	C	T	C	Sox2_MA0143.3	11	0	-	0	0	.
chr1	234570977	234570978	chr1:234570978:A:G	rs875268	A	G	a	Sox2_MA0143.3	27	0	-	0	0	.
chr1	234642817	234642818	chr1:234642818:G:A	rs12116699	G	A	G	Sox2_MA0143.3	0	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr1	234697113	234697114	chr1:234697114:G:A	rs10495350	G	A	A	Sox2_MA0143.3	5	1	+	8.676919043985553	1.7681642646703324	CCATTGTG
chr1	234714459	234714460	chr1:234714460:A:T	rs10910491	A	T	A	Sox2_MA0143.3	9	0	-	0	0	.
chr1	234722312	234722313	chr1:234722313:C:T	chr1:234722313:C:T	C	T	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr1	234722313	234722314	chr1:234722314:A:G	rs7524448	A	G	A	Sox2_MA0143.3	-3	0	+	0	0	.
chr1	234744350	234744351	chr1:234744351:T:G	rs112416744	T	G	T	Sox2_MA0143.3	26	0	-	0	0	.
chr1	234842649	234842650	chr1:234842650:G:A	rs188523191	G	A	G	Sox2_MA0143.3	19	0	+	0	0	.
chr1	234855274	234855275	chr1:234855275:C:T	rs115327709	C	T	C	Sox2_MA0143.3	22	0	-	0	0	.
chr1	234869416	234869417	chr1:234869417:G:A	rs34822243	G	A	G	Sox2_MA0143.3	9	0	+	0	0	.
chr1	234869420	234869421	chr1:234869421:T:C	rs2490457	T	C	C	Sox2_MA0143.3	13	0	+	0	0	.
chr1	234879765	234879766	chr1:234879766:G:A	rs2802957	G	A	G	Sox2_MA0143.3	0	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr1	234896090	234896091	chr1:234896091:T:A	rs35084314	T	A	A	Sox2_MA0143.3	2	1	-	8.676919043985553	8.864090315184848	CCATTGTG
chr1	234911925	234911926	chr1:234911926:G:A	rs967261471	G	A	G	Sox2_MA0143.3	-9	0	+	0	0	.
chr1	234913240	234913241	chr1:234913241:C:T	rs2674005	C	T	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr1	234928025	234928026	chr1:234928026:T:C	rs2802938	T	C	C	Sox2_MA0143.3	25	0	+	0	0	.
chr1	234933707	234933708	chr1:234933708:G:C	rs150256335	G	C	G	Sox2_MA0143.3	11	0	-	0	0	.
chr1	234937482	234937483	chr1:234937483:T:C	rs2673984	T	C	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr1	234957673	234957674	chr1:234957674:C:T	rs573937592	C	T	C	Sox2_MA0143.3	22	0	-	0	0	.
chr1	234957680	234957681	chr1:234957681:C:T	rs874154	C	T	C	Sox2_MA0143.3	15	0	-	0	0	.
chr1	234959157	234959158	chr1:234959158:T:A	rs150764095	T	A	T	Sox2_MA0143.3	24	0	+	0	0	.
chr1	235010198	235010199	chr1:235010199:C:T	rs28458951	C	T	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr1	235096054	235096055	chr1:235096055:C:T	rs67347362	C	T	T	Sox2_MA0143.3	-7	0	-	0	0	.
chr1	235129235	235129236	chr1:235129236:T:A	rs6700050	T	A	T	Sox2_MA0143.3	22	0	+	0	0	.
chr1	235130352	235130353	chr1:235130353:A:C	rs79200059	A	C	A	Sox2_MA0143.3	-14	0	+	0	0	.
chr1	235130365	235130366	chr1:235130366:T:C	rs34305128	T	C	T	Sox2_MA0143.3	-1	0	+	0	0	.
chr1	235138940	235138941	chr1:235138941:T:C	rs4659549	T	C	T	Sox2_MA0143.3	22	0	+	0	0	.
chr1	235138996	235138997	chr1:235138997:C:T	rs74148653	C	T	C	Sox2_MA0143.3	9	0	+	0	0	.
chr1	235297551	235297552	chr1:235297552:C:T	rs11581314	C	T	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr1	235298048	235298049	chr1:235298049:C:T	rs11581782	C	T	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr1	235304617	235304618	chr1:235304618:T:C	rs11583468	T	C	T	Sox2_MA0143.3	15	0	+	0	0	.
chr1	235304624	235304625	chr1:235304625:C:T	rs7553200	C	T	T	Sox2_MA0143.3	22	0	+	0	0	.
chr1	235339931	235339932	chr1:235339932:G:A	rs2803849	G	A	A	Sox2_MA0143.3	9	0	+	0	0	.
chr1	235339940	235339941	chr1:235339941:A:G	rs2789370	A	G	A	Sox2_MA0143.3	18	0	+	0	0	.
chr1	235345377	235345378	chr1:235345378:C:T	rs6671536	C	T	c	Sox2_MA0143.3	21	0	+	0	0	.
chr1	235417066	235417067	chr1:235417067:A:G	rs2153204	A	G	g	Sox2_MA0143.3	15	0	+	0	0	.
chr1	235469150	235469151	chr1:235469151:A:C	chr1:235469151:A:C	A	C	A	Sox2_MA0143.3	-6	0	+	0	0	.
chr1	235504860	235504861	chr1:235504861:T:C	rs696247	T	C	T	Sox2_MA0143.3	3	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr1	235565595	235565596	chr1:235565596:C:T	rs488618	C	T	C	Sox2_MA0143.3	7	1	-	8.676919043985553	3.3675628303222993	CCATTGTG
chr1	235594146	235594147	chr1:235594147:G:A	rs2774325	G	A	G	Sox2_MA0143.3	12	0	-	0	0	.
chr1	235632766	235632767	chr1:235632767:C:A	rs80310561	C	A	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr1	235634366	235634367	chr1:235634367:C:G	rs12031819	C	G	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr1	235639117	235639118	chr1:235639118:C:T	rs7518167	C	T	C	Sox2_MA0143.3	9	0	+	0	0	.
chr1	235639122	235639123	chr1:235639123:C:T	rs7518169	C	T	c	Sox2_MA0143.3	14	0	+	0	0	.
chr1	235651065	235651066	chr1:235651066:G:A	rs191644589	G	A	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr1	235749515	235749516	chr1:235749516:T:C	rs2799441	T	C	T	Sox2_MA0143.3	-9	0	-	0	0	.
chr1	235781993	235781994	chr1:235781994:T:C	rs6696123	T	C	T	Sox2_MA0143.3	9	0	-	0	0	.
chr1	235867340	235867341	chr1:235867341:G:T	rs7548449	G	T	G	Sox2_MA0143.3	10	0	+	0	0	.
chr1	235867354	235867355	chr1:235867355:A:G	rs182635085	A	G	A	Sox2_MA0143.3	24	0	+	0	0	.
chr1	235890364	235890365	chr1:235890365:G:A	rs35431111	G	A	G	Sox2_MA0143.3	-11	0	+	0	0	.
chr1	235932345	235932346	chr1:235932346:C:T	rs10803153	C	T	C	Sox2_MA0143.3	9	0	+	0	0	.
chr1	235940697	235940698	chr1:235940698:T:C	rs16832950	T	C	T	Sox2_MA0143.3	6	1	+	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr1	235998146	235998147	chr1:235998147:T:G	rs575904217	T	G	T	Sox2_MA0143.3	-15	0	+	0	0	.
chr1	236010676	236010677	chr1:236010677:A:G	rs180788197	A	G	A	Sox2_MA0143.3	18	0	+	0	0	.
chr1	236037806	236037807	chr1:236037807:G:A	rs77329930	G	A	G	Sox2_MA0143.3	-2	0	+	0	0	.
chr1	236039358	236039359	chr1:236039359:G:T	rs184586694	G	T	G	Sox2_MA0143.3	-5	0	+	0	0	.
chr1	236084227	236084228	chr1:236084228:T:G	rs2753433	T	G	.	Sox2_MA0143.3	-1	0	-	0	0	.
chr1	236103202	236103203	chr1:236103203:G:C	rs562080425	G	C	G	Sox2_MA0143.3	22	0	+	0	0	.
chr1	236117252	236117253	chr1:236117253:G:C	rs72767412	G	C	G	Sox2_MA0143.3	-16	0	-	0	0	.
chr1	236142489	236142490	chr1:236142490:A:G	rs549965640	A	G	A	Sox2_MA0143.3	4	1	-	9.206767037375712	2.2980122580604916	CCTTTGTC
chr1	236326014	236326015	chr1:236326015:T:C	rs7520804	T	C	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr1	236381049	236381050	chr1:236381050:C:G	rs6700178	C	G	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr1	236424493	236424494	chr1:236424494:A:G	rs607577	A	G	A	Sox2_MA0143.3	23	0	+	0	0	.
chr1	236508703	236508704	chr1:236508704:T:C	rs6689881	T	C	c	Sox2_MA0143.3	-12	0	+	0	0	.
chr1	236520816	236520817	chr1:236520817:G:T	rs77163907	G	T	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr1	236520828	236520829	chr1:236520829:G:A	rs138095053	G	A	G	Sox2_MA0143.3	-5	0	+	0	0	.
chr1	236530367	236530368	chr1:236530368:C:T	rs2794789	C	T	T	Sox2_MA0143.3	21	0	+	0	0	.
chr1	236561560	236561561	chr1:236561561:G:T	rs959393	G	T	T	Sox2_MA0143.3	-18	0	+	0	0	.
chr1	236572638	236572639	chr1:236572639:T:C	rs2853602	T	C	T	Sox2_MA0143.3	24	0	+	0	0	.
chr1	236688834	236688835	chr1:236688835:G:A	rs79277266	G	A	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr1	236688849	236688850	chr1:236688850:A:G	rs74727372	A	G	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr1	236734206	236734207	chr1:236734207:C:T	rs12569148	C	T	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr1	236797144	236797145	chr1:236797145:G:A	rs114507560	G	A	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr1	236825768	236825769	chr1:236825769:G:C	rs12060570	G	C	C	Sox2_MA0143.3	16	0	+	0	0	.
chr1	236825802	236825803	chr1:236825803:A:T	rs12096955	A	T	T	Sox2_MA0143.3	8	0	+	0	0	.
chr1	236870155	236870156	chr1:236870156:T:C	rs12039633	T	C	T	Sox2_MA0143.3	27	0	+	0	0	.
chr1	236889885	236889886	chr1:236889886:C:T	rs10925261	C	T	C	Sox2_MA0143.3	1	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr1	236895897	236895898	chr1:236895898:C:T	rs16834527	C	T	C	Sox2_MA0143.3	9	0	+	0	0	.
chr1	237115473	237115474	chr1:237115474:C:T	rs10925318	C	T	T	Sox2_MA0143.3	20	0	-	0	0	.
chr1	237241817	237241818	chr1:237241818:T:C	rs680081	T	C	T	Sox2_MA0143.3	16	0	+	0	0	.
chr1	237282812	237282813	chr1:237282813:A:G	rs7537963	A	G	A	Sox2_MA0143.3	19	0	-	0	0	.
chr1	237288853	237288854	chr1:237288854:A:G	rs12024073	A	G	A	Sox2_MA0143.3	6	1	-	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr1	237391152	237391153	chr1:237391153:G:A	rs12082285	G	A	A	Sox2_MA0143.3	14	0	+	0	0	.
chr1	237521921	237521922	chr1:237521922:A:G	rs2805432	A	G	G	Sox2_MA0143.3	22	0	+	0	0	.
chr1	237563199	237563200	chr1:237563200:A:G	rs2805475	A	G	G	Sox2_MA0143.3	24	0	-	0	0	.
chr1	237822306	237822307	chr1:237822307:C:G	rs2794838	C	G	C	Sox2_MA0143.3	-5	0	-	0	0	.
chr1	237852486	237852487	chr1:237852487:G:T	rs12081938	G	T	G	Sox2_MA0143.3	27	0	-	0	0	.
chr1	237869193	237869194	chr1:237869194:A:G	rs6696783	A	G	A	Sox2_MA0143.3	-2	0	+	0	0	.
chr1	237930436	237930437	chr1:237930437:G:T	rs578750	G	T	T	Sox2_MA0143.3	-6	0	+	0	0	.
chr1	238136248	238136249	chr1:238136249:T:A	rs12058299	T	A	A	Sox2_MA0143.3	-3	0	-	0	0	.
chr1	238570445	238570446	chr1:238570446:T:C	rs505941	T	C	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr1	238767558	238767559	chr1:238767559:A:G	rs10925760	A	G	A	Sox2_MA0143.3	13	0	-	0	0	.
chr1	238809876	238809877	chr1:238809877:C:G	rs2689159	C	G	G	Sox2_MA0143.3	5	1	-	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr1	239057111	239057112	chr1:239057112:G:C	rs3002294	G	C	G	Sox2_MA0143.3	10	0	+	0	0	.
chr1	239126318	239126319	chr1:239126319:T:A	rs10495438	T	A	T	Sox2_MA0143.3	4	1	+	9.800647049772198	2.8918922704569785	CCTTTGTT
chr1	239179185	239179186	chr1:239179186:G:C	rs7514881	G	C	G	Sox2_MA0143.3	27	0	-	0	0	.
chr1	239306433	239306434	chr1:239306434:T:G	rs10925867	T	G	T	Sox2_MA0143.3	14	0	-	0	0	.
chr1	239367441	239367442	chr1:239367442:A:G	rs1317950	A	G	A	Sox2_MA0143.3	20	0	-	0	0	.
chr1	239512934	239512935	chr1:239512935:T:G	rs1782349	T	G	T	Sox2_MA0143.3	-8	0	+	0	0	.
chr1	239537402	239537403	chr1:239537403:G:A	rs140449531	G	A	G	Sox2_MA0143.3	10	0	-	0	0	.
chr1	239558907	239558908	chr1:239558908:G:A	rs7525710	G	A	G	Sox2_MA0143.3	-14	0	+	0	0	.
chr1	239608675	239608676	chr1:239608676:C:T	rs61836583	C	T	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr1	239726188	239726189	chr1:239726189:A:G	rs12143018	A	G	A	Sox2_MA0143.3	15	0	+	0	0	.
chr1	239808394	239808395	chr1:239808395:C:T	rs535514	C	T	T	Sox2_MA0143.3	9	0	-	0	0	.
chr1	239862944	239862945	chr1:239862945:C:T	rs10802808	C	T	T	Sox2_MA0143.3	-15	0	+	0	0	.
chr1	239862952	239862953	chr1:239862953:A:T	rs10802809	A	T	T	Sox2_MA0143.3	-7	0	+	0	0	.
chr1	239994749	239994750	chr1:239994750:C:T	rs7531172	C	T	t	Sox2_MA0143.3	-8	0	+	0	0	.
chr1	240011533	240011534	chr1:240011534:A:G	rs12058044	A	G	a	Sox2_MA0143.3	18	0	+	0	0	.
chr1	240062908	240062909	chr1:240062909:T:C	rs7525541	T	C	T	Sox2_MA0143.3	-2	0	-	0	0	.
chr1	240065353	240065354	chr1:240065354:A:G	rs10926114	A	G	A	Sox2_MA0143.3	6	1	-	9.613475778572903	2.7047209992576837	CCATTGTT
chr1	240073423	240073424	chr1:240073424:C:T	rs148384009	C	T	C	Sox2_MA0143.3	0	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr1	240100667	240100668	chr1:240100668:T:C	rs73128547	T	C	T	Sox2_MA0143.3	-7	0	+	0	0	.
chr1	240399901	240399902	chr1:240399902:T:A	rs79164752	T	A	T	Sox2_MA0143.3	-12	0	+	0	0	.
chr1	240452922	240452923	chr1:240452923:C:T	rs979898590	C	T	C	Sox2_MA0143.3	12	0	-	0	0	.
chr1	240458087	240458088	chr1:240458088:G:A	rs66965893	G	A	G	Sox2_MA0143.3	22	0	-	0	0	.
chr1	240479866	240479867	chr1:240479867:A:C	rs11578184	A	C	A	Sox2_MA0143.3	-5	0	-	0	0	.
chr1	240595181	240595182	chr1:240595182:G:A	rs61833681	G	A	A	Sox2_MA0143.3	0	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr1	240619057	240619058	chr1:240619058:T:A	rs376712318	T	A	T	Sox2_MA0143.3	20	0	+	0	0	.
chr1	241036655	241036656	chr1:241036656:C:T	rs2500241	C	T	C	Sox2_MA0143.3	15	0	-	0	0	.
chr1	241113655	241113656	chr1:241113656:T:C	rs72632887	T	C	T	Sox2_MA0143.3	24	0	+	0	0	.
chr1	241114798	241114799	chr1:241114799:C:A	chr1:241114799:C:A	C	A	c	Sox2_MA0143.3	-14	0	+	0	0	.
chr1	241125577	241125578	chr1:241125578:G:T	rs4131804	G	T	T	Sox2_MA0143.3	11	0	-	0	0	.
chr1	241171369	241171370	chr1:241171370:T:C	rs60756951	T	C	T	Sox2_MA0143.3	4	1	+	8.676919043985553	1.7681642646703322	CCATTGTG
chr1	241186851	241186852	chr1:241186852:T:A	rs76468507	T	A	T	Sox2_MA0143.3	21	0	-	0	0	.
chr1	241291206	241291207	chr1:241291207:T:C	rs6697953	T	C	T	Sox2_MA0143.3	-13	0	-	0	0	.
chr1	241296595	241296596	chr1:241296596:G:A	rs77878421	G	A	G	Sox2_MA0143.3	17	0	+	0	0	.
chr1	241411566	241411567	chr1:241411567:G:A	rs7529232	G	A	G	Sox2_MA0143.3	0	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr1	241443490	241443491	chr1:241443491:C:T	rs2994969	C	T	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr1	241583051	241583052	chr1:241583052:G:A	rs660741	G	A	A	Sox2_MA0143.3	0	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr1	241583061	241583062	chr1:241583062:A:G	rs143816686	A	G	A	Sox2_MA0143.3	-10	0	-	0	0	.
chr1	241605662	241605663	chr1:241605663:C:A	rs6429282	C	A	A	Sox2_MA0143.3	17	0	-	0	0	.
chr1	241640355	241640356	chr1:241640356:A:G	rs7513451	A	G	-	Sox2_MA0143.3	-2	0	+	0	0	.
chr1	241640369	241640370	chr1:241640370:G:A	rs187475644	G	A	-	Sox2_MA0143.3	12	0	+	0	0	.
chr1	241640371	241640372	chr1:241640372:G:C	rs1227834062	G	C	-	Sox2_MA0143.3	14	0	+	0	0	.
chr1	241707700	241707701	chr1:241707701:T:G	rs529966161	T	G	T	Sox2_MA0143.3	21	0	-	0	0	.
chr1	241707707	241707708	chr1:241707708:C:T	rs12028060	C	T	T	Sox2_MA0143.3	14	0	-	0	0	.
chr1	241747978	241747979	chr1:241747979:C:G	rs3922507	C	G	G	Sox2_MA0143.3	-3	0	-	0	0	.
chr1	241748426	241748427	chr1:241748427:T:C	rs12081277	T	C	C	Sox2_MA0143.3	21	0	-	0	0	.
chr1	241782378	241782379	chr1:241782379:C:A	rs6667348	C	A	A	Sox2_MA0143.3	-15	0	+	0	0	.
chr1	241792218	241792219	chr1:241792219:C:G	rs78895875	C	G	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr1	241845571	241845572	chr1:241845572:A:G	rs12568909	A	G	A	Sox2_MA0143.3	-17	0	-	0	0	.
chr1	241855300	241855301	chr1:241855301:A:T	rs4149889	A	T	A	Sox2_MA0143.3	15	0	-	0	0	.
chr1	241870340	241870341	chr1:241870341:T:C	rs2298931	T	C	T	Sox2_MA0143.3	-11	0	+	0	0	.
chr1	241919100	241919101	chr1:241919101:G:A	rs192486542	G	A	g	Sox2_MA0143.3	-5	0	-	0	0	.
chr1	242000927	242000928	chr1:242000928:C:T	rs72759143	C	T	C	Sox2_MA0143.3	24	0	+	0	0	.
chr1	242206235	242206236	chr1:242206236:T:C	rs1264902703	T	C	T	Sox2_MA0143.3	25	0	+	0	0	.
chr1	242211344	242211345	chr1:242211345:C:G	rs4428869	C	G	c	Sox2_MA0143.3	13	0	-	0	0	.
chr1	242331350	242331351	chr1:242331351:G:A	rs1832892	G	A	A	Sox2_MA0143.3	26	0	-	0	0	.
chr1	242376353	242376354	chr1:242376354:G:A	rs78250230	G	A	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr1	242437064	242437065	chr1:242437065:C:T	rs6668435	C	T	C	Sox2_MA0143.3	27	0	+	0	0	.
chr1	242457163	242457164	chr1:242457164:C:T	rs6700801	C	T	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr1	242675185	242675186	chr1:242675186:C:T	rs4658846	C	T	T	Sox2_MA0143.3	-4	0	-	0	0	.
chr1	242781674	242781675	chr1:242781675:A:C	chr1:242781675:A:C	A	C	A	Sox2_MA0143.3	-19	0	+	0	0	.
chr1	243440622	243440623	chr1:243440623:T:C	rs71652486	T	C	T	Sox2_MA0143.3	16	0	-	0	0	.
chr1	243481773	243481774	chr1:243481774:A:G	rs12125812	A	G	A	Sox2_MA0143.3	-9	0	-	0	0	.
chr1	243731079	243731080	chr1:243731080:C:T	rs755850645	C	T	C	Sox2_MA0143.3	17	0	-	0	0	.
chr1	243734471	243734472	chr1:243734472:C:T	rs897959	C	T	C	Sox2_MA0143.3	18	0	-	0	0	.
chr1	243791349	243791350	chr1:243791350:A:G	rs7553458	A	G	G	Sox2_MA0143.3	4	1	-	8.676919043985553	1.7681642646703322	CCATTGTG
chr1	244065396	244065397	chr1:244065397:T:C	rs2353097	T	C	T	Sox2_MA0143.3	15	0	-	0	0	.
chr1	244065406	244065407	chr1:244065407:C:T	rs147350540	C	T	C	Sox2_MA0143.3	5	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr1	244081239	244081240	chr1:244081240:T:C	rs2454228	T	C	T	Sox2_MA0143.3	24	0	-	0	0	.
chr1	244095382	244095383	chr1:244095383:T:C	rs2015399	T	C	T	Sox2_MA0143.3	27	0	+	0	0	.
chr1	244175358	244175359	chr1:244175359:C:T	rs74153616	C	T	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr1	244187601	244187602	chr1:244187602:C:T	rs74882083	C	T	C	Sox2_MA0143.3	19	0	+	0	0	.
chr1	244216750	244216751	chr1:244216751:A:G	rs12130293	A	G	G	Sox2_MA0143.3	-9	0	+	0	0	.
chr1	244216751	244216752	chr1:244216752:A:G	rs12130294	A	G	A	Sox2_MA0143.3	-8	0	+	0	0	.
chr1	244222873	244222874	chr1:244222874:G:T	rs6686011	G	T	T	Sox2_MA0143.3	-4	0	+	0	0	.
chr1	244248581	244248582	chr1:244248582:T:C	rs10754821	T	C	T	Sox2_MA0143.3	-6	0	+	0	0	.
chr1	244341868	244341869	chr1:244341869:C:G	rs183073323	C	G	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr1	244599812	244599813	chr1:244599813:A:G	rs143953627	A	G	A	Sox2_MA0143.3	-15	0	-	0	0	.
chr1	244678890	244678891	chr1:244678891:A:C	rs183941350	A	C	A	Sox2_MA0143.3	16	0	-	0	0	.
chr1	244729800	244729801	chr1:244729801:T:C	rs4658653	T	C	T	Sox2_MA0143.3	24	0	+	0	0	.
chr1	244815768	244815769	chr1:244815769:A:C	rs67064196	A	C	C	Sox2_MA0143.3	10	0	-	0	0	.
chr1	244835167	244835168	chr1:244835168:C:G	rs1015832956	C	G	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr1	244835533	244835534	chr1:244835534:G:C	rs544388559	G	C	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr1	244835543	244835544	chr1:244835544:G:C	rs940127749	G	C	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr1	244856982	244856983	chr1:244856983:T:C	rs1874393	T	C	T	Sox2_MA0143.3	10	0	+	0	0	.
chr1	244971512	244971513	chr1:244971513:T:G	rs6698137	T	G	T	Sox2_MA0143.3	25	0	+	0	0	.
chr1	245169659	245169660	chr1:245169660:A:G	rs1125021	A	G	a	Sox2_MA0143.3	-20	0	-	0	0	.
chr1	245239761	245239762	chr1:245239762:C:T	rs6686205	C	T	-	Sox2_MA0143.3	-19	0	+	0	0	.
chr1	245392724	245392725	chr1:245392725:T:C	rs1173838	T	C	T	Sox2_MA0143.3	4	1	+	8.864090315184848	1.9553355358696274	CCTTTGTG
chr1	245416950	245416951	chr1:245416951:T:C	rs1069217	T	C	C	Sox2_MA0143.3	4	1	+	8.676919043985553	1.7681642646703322	CCATTGTG
chr1	245438942	245438943	chr1:245438943:G:C	rs969228	G	C	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr1	245449361	245449362	chr1:245449362:T:C	rs55850733	T	C	T	Sox2_MA0143.3	-4	0	-	0	0	.
chr1	245513818	245513819	chr1:245513819:G:A	rs10924220	G	A	G	Sox2_MA0143.3	-2	0	+	0	0	.
chr1	245541207	245541208	chr1:245541208:G:A	rs55899314	G	A	G	Sox2_MA0143.3	27	0	-	0	0	.
chr1	245554831	245554832	chr1:245554832:G:A	rs1771499	G	A	G	Sox2_MA0143.3	13	0	-	0	0	.
chr1	245567263	245567264	chr1:245567264:C:T	rs116182432	C	T	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr1	245585279	245585280	chr1:245585280:A:C	rs748671500	A	C	A	Sox2_MA0143.3	19	0	+	0	0	.
chr1	245587526	245587527	chr1:245587527:T:C	rs12410705	T	C	T	Sox2_MA0143.3	6	1	+	9.613475778572903	2.7047209992576837	CCATTGTT
chr1	245599210	245599211	chr1:245599211:C:T	rs1572894	C	T	T	Sox2_MA0143.3	26	0	-	0	0	.
chr1	245599222	245599223	chr1:245599223:A:G	rs1572893	A	G	A	Sox2_MA0143.3	14	0	-	0	0	.
chr1	245599239	245599240	chr1:245599240:G:A	rs550963140	G	A	G	Sox2_MA0143.3	-3	0	-	0	0	.
chr1	245599240	245599241	chr1:245599241:T:G	rs72762883	T	G	T	Sox2_MA0143.3	-4	0	-	0	0	.
chr1	245599252	245599253	chr1:245599253:A:G	rs1572892	A	G	A	Sox2_MA0143.3	-16	0	-	0	0	.
chr1	245675152	245675153	chr1:245675153:G:A	rs35166037	G	A	G	Sox2_MA0143.3	8	0	+	0	0	.
chr1	245704440	245704441	chr1:245704441:G:A	rs7535506	G	A	G	Sox2_MA0143.3	27	0	+	0	0	.
chr1	245705996	245705997	chr1:245705997:T:C	rs2066239	T	C	C	Sox2_MA0143.3	13	0	-	0	0	.
chr1	245777031	245777032	chr1:245777032:G:A	rs6687221	G	A	A	Sox2_MA0143.3	7	1	-	9.206767037375712	9.800647049772198	CCTTTGTC
chr1	245803451	245803452	chr1:245803452:C:A	rs2791400	C	A	A	Sox2_MA0143.3	5	1	-	9.613475778572903	2.7047209992576837	CCATTGTT
chr1	245803464	245803465	chr1:245803465:C:G	rs115035445	C	G	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr1	245831569	245831570	chr1:245831570:T:C	rs11808632	T	C	T	Sox2_MA0143.3	14	0	-	0	0	.
chr1	245831589	245831590	chr1:245831590:G:A	rs11806942	G	A	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr1	245857334	245857335	chr1:245857335:A:G	rs61830190	A	G	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr1	245997798	245997799	chr1:245997799:T:G	rs35099039	T	G	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr1	246004714	246004715	chr1:246004715:C:T	rs4654186	C	T	T	Sox2_MA0143.3	-5	0	-	0	0	.
chr1	246108085	246108086	chr1:246108086:C:G	rs10802333	C	G	G	Sox2_MA0143.3	26	0	-	0	0	.
chr1	246139543	246139544	chr1:246139544:C:T	rs10157849	C	T	C	Sox2_MA0143.3	12	0	+	0	0	.
chr1	246139690	246139691	chr1:246139691:A:G	rs76107120	A	G	A	Sox2_MA0143.3	22	0	-	0	0	.
chr1	246168859	246168860	chr1:246168860:T:C	rs6664226	T	C	C	Sox2_MA0143.3	26	0	-	0	0	.
chr1	246195886	246195887	chr1:246195887:C:A	rs10924539	C	A	C	Sox2_MA0143.3	12	0	+	0	0	.
chr1	246215062	246215063	chr1:246215063:G:A	rs757266285	G	A	G	Sox2_MA0143.3	16	0	-	0	0	.
chr1	246215068	246215069	chr1:246215069:C:T	rs10802352	C	T	T	Sox2_MA0143.3	10	0	-	0	0	.
chr1	246267908	246267909	chr1:246267909:T:A	rs4654226	T	A	T	Sox2_MA0143.3	25	0	+	0	0	.
chr1	246297503	246297504	chr1:246297504:C:T	rs1538692	C	T	C	Sox2_MA0143.3	16	0	-	0	0	.
chr1	246355880	246355881	chr1:246355881:C:T	rs12118470	C	T	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr1	246407145	246407146	chr1:246407146:C:A	rs6666645	C	A	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr1	246430773	246430774	chr1:246430774:A:C	rs113115345	A	C	A	Sox2_MA0143.3	24	0	-	0	0	.
chr1	246505730	246505731	chr1:246505731:C:T	rs10754520	C	T	C	Sox2_MA0143.3	13	0	-	0	0	.
chr1	246506043	246506044	chr1:246506044:A:G	rs10737790	A	G	A	Sox2_MA0143.3	17	0	-	0	0	.
chr1	246551893	246551894	chr1:246551894:C:T	rs10802426	C	T	T	Sox2_MA0143.3	14	0	+	0	0	.
chr1	246591821	246591822	chr1:246591822:T:C	rs6702823	T	C	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr1	246622145	246622146	chr1:246622146:C:A	rs3124077	C	A	A	Sox2_MA0143.3	22	0	-	0	0	.
chr1	246800889	246800890	chr1:246800890:T:C	rs140260169	T	C	t	Sox2_MA0143.3	24	0	+	0	0	.
chr1	246804750	246804751	chr1:246804751:C:T	rs4926464	C	T	T	Sox2_MA0143.3	11	0	-	0	0	.
chr1	246829014	246829015	chr1:246829015:G:A	rs3007302	G	A	G	Sox2_MA0143.3	27	0	+	0	0	.
chr1	247008031	247008032	chr1:247008032:A:C	rs923145056	A	C	a	Sox2_MA0143.3	26	0	-	0	0	.
chr1	247008033	247008034	chr1:247008034:C:T	rs61852608	C	T	c	Sox2_MA0143.3	24	0	-	0	0	.
chr1	247055188	247055189	chr1:247055189:C:T	rs12130075	C	T	C	Sox2_MA0143.3	22	0	+	0	0	.
chr1	247111102	247111103	chr1:247111103:G:A	rs770669520	G	A	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr1	247211747	247211748	chr1:247211748:A:G	rs4551629	A	G	a	Sox2_MA0143.3	26	0	-	0	0	.
chr1	247281884	247281885	chr1:247281885:G:C	rs12566166	G	C	g	Sox2_MA0143.3	-15	0	-	0	0	.
chr1	247322910	247322911	chr1:247322911:G:A	rs41268345	G	A	G	Sox2_MA0143.3	18	0	+	0	0	.
chr1	247325203	247325204	chr1:247325204:C:T	rs140906617	C	T	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr1	247366935	247366936	chr1:247366936:T:A	rs10737801	T	A	T	Sox2_MA0143.3	16	0	+	0	0	.
chr1	247468787	247468788	chr1:247468788:T:C	rs115456308	T	C	T	Sox2_MA0143.3	9	0	+	0	0	.
chr1	247551120	247551121	chr1:247551121:G:A	rs60379847	G	A	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr1	247712112	247712113	chr1:247712113:A:G	rs2282316	A	G	G	Sox2_MA0143.3	2	1	-	9.206767037375712	2.900948058900136	CCTTTGTC
chr1	248127600	248127601	chr1:248127601:G:A	rs12043363	G	A	g	Sox2_MA0143.3	21	0	+	0	0	.
chr1	248349464	248349465	chr1:248349465:G:T	rs28545014	G	T	G	Sox2_MA0143.3	12	0	-	0	0	.
chr1	248482466	248482467	chr1:248482467:C:G	rs73149426	C	G	.	Sox2_MA0143.3	-19	0	+	0	0	.
chr1	248482501	248482502	chr1:248482502:G:A	rs61833369	G	A	.	Sox2_MA0143.3	16	0	+	0	0	.
chr1	248623695	248623696	chr1:248623696:T:C	rs55985473	T	C	t	Sox2_MA0143.3	-17	0	-	0	0	.
chr1	248773806	248773807	chr1:248773807:T:C	rs6685512	T	C	N	Sox2_MA0143.3	19	0	+	0	0	.
chr1	248779462	248779463	chr1:248779463:A:G	rs12734061	A	G	N	Sox2_MA0143.3	4	1	-	9.206767037375712	2.2980122580604916	CCTTTGTC
chr1	248783087	248783088	chr1:248783088:T:G	rs5024943	T	G	t	Sox2_MA0143.3	7	1	-	3.5547341015215945	9.206767037375712	CCTTTGTA
chr1	248783121	248783122	chr1:248783122:T:C	rs5024942	T	C	N	Sox2_MA0143.3	8	0	-	0	0	.
chr1	248793664	248793665	chr1:248793665:G:T	rs57971147	G	T	g	Sox2_MA0143.3	18	0	-	0	0	.
chr1	248874398	248874399	chr1:248874399:C:G	rs28444731	C	G	C	Sox2_MA0143.3	5	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr1	248874410	248874411	chr1:248874411:C:T	rs6659450	C	T	T	Sox2_MA0143.3	-7	0	-	0	0	.
chr10	267363	267364	chr10:267364:T:C	rs4880567	T	C	T	Sox2_MA0143.3	27	0	-	0	0	.
chr10	269584	269585	chr10:269585:A:T	rs10736957	A	T	T	Sox2_MA0143.3	-2	0	+	0	0	.
chr10	527190	527191	chr10:527191:C:T	rs7906612	C	T	C	Sox2_MA0143.3	-20	0	-	0	0	.
chr10	570368	570369	chr10:570369:T:C	rs4881486	T	C	T	Sox2_MA0143.3	-3	0	-	0	0	.
chr10	664095	664096	chr10:664096:G:A	rs114814095	G	A	-	Sox2_MA0143.3	25	0	-	0	0	.
chr10	664106	664107	chr10:664107:G:A	rs1973083	G	A	-	Sox2_MA0143.3	14	0	-	0	0	.
chr10	683061	683062	chr10:683062:G:A	rs78684926	G	A	.	Sox2_MA0143.3	-4	0	-	0	0	.
chr10	708092	708093	chr10:708093:C:A	rs2265090	C	A	C	Sox2_MA0143.3	24	0	+	0	0	.
chr10	760337	760338	chr10:760338:C:T	rs2094234	C	T	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr10	798489	798490	chr10:798490:G:A	rs2148368	G	A	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr10	979630	979631	chr10:979631:C:T	rs4881547	C	T	C	Sox2_MA0143.3	1	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr10	986627	986628	chr10:986628:A:C	rs11253552	A	C	A	Sox2_MA0143.3	-13	0	+	0	0	.
chr10	1030106	1030107	chr10:1030107:C:T	rs7912673	C	T	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr10	1200583	1200584	chr10:1200584:C:T	rs558590448	C	T	C	Sox2_MA0143.3	26	0	+	0	0	.
chr10	1290292	1290293	chr10:1290293:A:G	rs6560722	A	G	A	Sox2_MA0143.3	26	0	+	0	0	.
chr10	1310015	1310016	chr10:1310016:G:C	rs4880496	G	C	G	Sox2_MA0143.3	22	0	+	0	0	.
chr10	1343427	1343428	chr10:1343428:T:C	rs2805528	T	C	T	Sox2_MA0143.3	-15	0	+	0	0	.
chr10	1343433	1343434	chr10:1343434:T:A	rs111716009	T	A	T	Sox2_MA0143.3	-9	0	+	0	0	.
chr10	1359350	1359351	chr10:1359351:C:T	rs6560726	C	T	T	Sox2_MA0143.3	1	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr10	1396401	1396402	chr10:1396402:A:C	rs12779875	A	C	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr10	1422907	1422908	chr10:1422908:C:A	rs60423315	C	A	c	Sox2_MA0143.3	21	0	-	0	0	.
chr10	1422947	1422948	chr10:1422948:T:C	rs2805544	T	C	c	Sox2_MA0143.3	-19	0	-	0	0	.
chr10	1448787	1448788	chr10:1448788:G:A	rs56368317	G	A	G	Sox2_MA0143.3	8	0	+	0	0	.
chr10	1496720	1496721	chr10:1496721:A:G	rs2820621	A	G	A	Sox2_MA0143.3	17	0	+	0	0	.
chr10	1496726	1496727	chr10:1496727:A:G	rs113981460	A	G	A	Sox2_MA0143.3	23	0	+	0	0	.
chr10	1549685	1549686	chr10:1549686:T:A	rs10903479	T	A	T	Sox2_MA0143.3	-9	0	+	0	0	.
chr10	1549705	1549706	chr10:1549706:A:G	rs11250614	A	G	A	Sox2_MA0143.3	11	0	+	0	0	.
chr10	1627324	1627325	chr10:1627325:G:C	rs1875009	G	C	C	Sox2_MA0143.3	21	0	-	0	0	.
chr10	1631356	1631357	chr10:1631357:G:C	rs17156673	G	C	G	Sox2_MA0143.3	12	0	-	0	0	.
chr10	1644452	1644453	chr10:1644453:G:A	rs78006380	G	A	G	Sox2_MA0143.3	27	0	-	0	0	.
chr10	1659593	1659594	chr10:1659594:C:T	rs10751812	C	T	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr10	1677528	1677529	chr10:1677529:C:G	rs12763765	C	G	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr10	1806068	1806069	chr10:1806069:T:G	rs4880925	T	G	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr10	1946403	1946404	chr10:1946404:G:A	rs7073023	G	A	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr10	1974002	1974003	chr10:1974003:G:A	rs10794808	G	A	G	Sox2_MA0143.3	11	0	+	0	0	.
chr10	2011327	2011328	chr10:2011328:T:C	rs7093471	T	C	C	Sox2_MA0143.3	3	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr10	2048559	2048560	chr10:2048560:G:A	rs28493361	G	A	G	Sox2_MA0143.3	26	0	+	0	0	.
chr10	2049849	2049850	chr10:2049850:T:A	rs116914139	T	A	T	Sox2_MA0143.3	-4	0	+	0	0	.
chr10	2049878	2049879	chr10:2049879:C:T	rs17157575	C	T	T	Sox2_MA0143.3	25	0	+	0	0	.
chr10	2137832	2137833	chr10:2137833:T:G	rs952970	T	G	G	Sox2_MA0143.3	24	0	-	0	0	.
chr10	2229064	2229065	chr10:2229065:T:C	rs10903706	T	C	T	Sox2_MA0143.3	-18	0	-	0	0	.
chr10	2326585	2326586	chr10:2326586:C:T	rs34406307	C	T	C	Sox2_MA0143.3	0	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr10	2439293	2439294	chr10:2439294:C:T	rs10751876	C	T	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr10	2470726	2470727	chr10:2470727:A:G	rs2452213	A	G	G	Sox2_MA0143.3	-11	0	+	0	0	.
chr10	2584993	2584994	chr10:2584994:G:T	rs78789513	G	T	G	Sox2_MA0143.3	18	0	-	0	0	.
chr10	2798830	2798831	chr10:2798831:G:A	rs11251517	G	A	G	Sox2_MA0143.3	18	0	-	0	0	.
chr10	2883949	2883950	chr10:2883950:C:T	rs117315968	C	T	C	Sox2_MA0143.3	18	0	+	0	0	.
chr10	2918092	2918093	chr10:2918093:C:T	rs73579449	C	T	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr10	2918124	2918125	chr10:2918125:C:T	rs10751898	C	T	C	Sox2_MA0143.3	19	0	+	0	0	.
chr10	2950292	2950293	chr10:2950293:C:T	rs74111247	C	T	C	Sox2_MA0143.3	11	0	-	0	0	.
chr10	2950317	2950318	chr10:2950318:G:A	rs74354128	G	A	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr10	2990934	2990935	chr10:2990935:T:A	rs4881046	T	A	T	Sox2_MA0143.3	-1	0	+	0	0	.
chr10	3008572	3008573	chr10:3008573:T:C	rs11251638	T	C	N	Sox2_MA0143.3	-6	0	+	0	0	.
chr10	3032096	3032097	chr10:3032097:T:G	rs4881060	T	G	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr10	3055552	3055553	chr10:3055553:C:T	rs10903949	C	T	C	Sox2_MA0143.3	18	0	+	0	0	.
chr10	3095166	3095167	chr10:3095167:C:T	rs79948861	C	T	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr10	3095194	3095195	chr10:3095195:T:A	rs577465434	T	A	A	Sox2_MA0143.3	16	0	+	0	0	.
chr10	3103271	3103272	chr10:3103272:T:C	rs114006515	T	C	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr10	3119678	3119679	chr10:3119679:C:T	rs7924111	C	T	t	Sox2_MA0143.3	-20	0	+	0	0	.
chr10	3127557	3127558	chr10:3127558:G:C	rs2388565	G	C	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr10	3148660	3148661	chr10:3148661:T:G	rs4881113	T	G	T	Sox2_MA0143.3	-5	0	+	0	0	.
chr10	3148988	3148989	chr10:3148989:T:C	rs4881114	T	C	C	Sox2_MA0143.3	25	0	-	0	0	.
chr10	3149010	3149011	chr10:3149011:A:G	rs4881115	A	G	A	Sox2_MA0143.3	3	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr10	3154149	3154150	chr10:3154150:G:A	rs57504314	G	A	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr10	3157962	3157963	chr10:3157963:G:C	rs9423705	G	C	G	Sox2_MA0143.3	0	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr10	3162641	3162642	chr10:3162642:G:C	rs45496991	G	C	G	Sox2_MA0143.3	18	0	-	0	0	.
chr10	3166319	3166320	chr10:3166320:G:A	rs1127047	G	A	G	Sox2_MA0143.3	-3	0	-	0	0	.
chr10	3166850	3166851	chr10:3166851:T:C	rs76699327	T	C	t	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr10	3235516	3235517	chr10:3235517:C:T	rs35799998	C	T	C	Sox2_MA0143.3	17	0	-	0	0	.
chr10	3240545	3240546	chr10:3240546:A:G	rs11251793	A	G	A	Sox2_MA0143.3	-20	0	+	0	0	.
chr10	3240582	3240583	chr10:3240583:A:C	chr10:3240583:A:C	A	C	A	Sox2_MA0143.3	17	0	+	0	0	.
chr10	3399286	3399287	chr10:3399287:G:T	chr10:3399287:G:T	G	T	G	Sox2_MA0143.3	-16	0	-	0	0	.
chr10	3415095	3415096	chr10:3415096:C:T	rs7901480	C	T	C	Sox2_MA0143.3	10	0	-	0	0	.
chr10	3477958	3477959	chr10:3477959:G:A	rs483881	G	A	A	Sox2_MA0143.3	14	0	-	0	0	.
chr10	3485707	3485708	chr10:3485708:A:G	rs7099538	A	G	A	Sox2_MA0143.3	26	0	+	0	0	.
chr10	3570735	3570736	chr10:3570736:G:A	rs7092497	G	A	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr10	3661445	3661446	chr10:3661446:T:C	rs2397330	T	C	T	Sox2_MA0143.3	15	0	-	0	0	.
chr10	3719308	3719309	chr10:3719309:C:G	chr10:3719309:C:G	C	G	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr10	3719308	3719309	chr10:3719309:C:T	rs17325854	C	T	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr10	3765659	3765660	chr10:3765660:G:A	rs4259743	G	A	G	Sox2_MA0143.3	11	0	+	0	0	.
chr10	3773099	3773100	chr10:3773100:C:T	rs2171302	C	T	T	Sox2_MA0143.3	15	0	-	0	0	.
chr10	3781133	3781134	chr10:3781134:G:A	rs57966882	G	A	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr10	3800128	3800129	chr10:3800129:C:T	rs11252108	C	T	T	Sox2_MA0143.3	9	0	-	0	0	.
chr10	3829129	3829130	chr10:3829130:A:C	rs191630940	A	C	A	Sox2_MA0143.3	13	0	-	0	0	.
chr10	3863690	3863691	chr10:3863691:T:A	rs7901171	T	A	T	Sox2_MA0143.3	9	0	+	0	0	.
chr10	3876447	3876448	chr10:3876448:T:C	rs943029	T	C	T	Sox2_MA0143.3	2	1	-	9.613475778572903	3.494828071296623	CCATTGTT
chr10	3883045	3883046	chr10:3883046:G:A	rs10904120	G	A	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr10	3889832	3889833	chr10:3889833:C:A	rs10904126	C	A	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr10	3960020	3960021	chr10:3960021:T:C	rs56154000	T	C	T	Sox2_MA0143.3	-18	0	+	0	0	.
chr10	3978407	3978408	chr10:3978408:A:G	rs10795113	A	G	G	Sox2_MA0143.3	-5	0	+	0	0	.
chr10	3979093	3979094	chr10:3979094:C:A	rs10904165	C	A	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr10	4013106	4013107	chr10:4013107:C:G	rs117881158	C	G	-	Sox2_MA0143.3	20	0	+	0	0	.
chr10	4054107	4054108	chr10:4054108:T:C	rs2765665	T	C	C	Sox2_MA0143.3	17	0	-	0	0	.
chr10	4093901	4093902	chr10:4093902:T:A	rs10795123	T	A	A	Sox2_MA0143.3	21	0	-	0	0	.
chr10	4095660	4095661	chr10:4095661:G:A	rs79193401	G	A	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr10	4108858	4108859	chr10:4108859:G:A	rs4881291	G	A	G	Sox2_MA0143.3	8	0	-	0	0	.
chr10	4130539	4130540	chr10:4130540:T:G	rs10795138	T	G	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr10	4131465	4131466	chr10:4131466:T:C	rs74114624	T	C	T	Sox2_MA0143.3	22	0	+	0	0	.
chr10	4309687	4309688	chr10:4309688:C:T	rs11252457	C	T	C	Sox2_MA0143.3	12	0	-	0	0	.
chr10	4373101	4373102	chr10:4373102:A:G	rs111971028	A	G	A	Sox2_MA0143.3	-20	0	+	0	0	.
chr10	4405894	4405895	chr10:4405895:G:T	rs76666402	G	T	A	Sox2_MA0143.3	21	0	+	0	0	.
chr10	4470382	4470383	chr10:4470383:C:G	rs11816583	C	G	C	Sox2_MA0143.3	24	0	-	0	0	.
chr10	4472251	4472252	chr10:4472252:G:A	rs10904264	G	A	G	Sox2_MA0143.3	10	0	-	0	0	.
chr10	4513048	4513049	chr10:4513049:C:T	rs112579172	C	T	C	Sox2_MA0143.3	10	0	+	0	0	.
chr10	4569343	4569344	chr10:4569344:A:G	rs7089195	A	G	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr10	4573938	4573939	chr10:4573939:C:T	rs313504	C	T	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr10	4634077	4634078	chr10:4634078:C:T	rs313470	C	T	T	Sox2_MA0143.3	-5	0	-	0	0	.
chr10	4634088	4634089	chr10:4634089:G:C	rs7068449	G	C	G	Sox2_MA0143.3	-16	0	-	0	0	.
chr10	4771018	4771019	chr10:4771019:C:A	rs1901632	C	A	C	Sox2_MA0143.3	17	0	-	0	0	.
chr10	4781126	4781127	chr10:4781127:G:A	rs4880686	G	A	A	Sox2_MA0143.3	0	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr10	4809616	4809617	chr10:4809617:A:G	rs2961617	A	G	G	Sox2_MA0143.3	12	0	+	0	0	.
chr10	4809620	4809621	chr10:4809621:A:G	rs78089731	A	G	A	Sox2_MA0143.3	16	0	+	0	0	.
chr10	4847882	4847883	chr10:4847883:G:A	rs145929706	G	A	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr10	4849547	4849548	chr10:4849548:T:C	rs17133791	T	C	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr10	4849970	4849971	chr10:4849971:G:A	rs17133794	G	A	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr10	4861410	4861411	chr10:4861411:T:C	rs4268414	T	C	C	Sox2_MA0143.3	6	1	+	9.019595766176417	2.110840986861197	CCATTGTC
chr10	4867019	4867020	chr10:4867020:G:A	rs12098333	G	A	G	Sox2_MA0143.3	21	0	-	0	0	.
chr10	5014338	5014339	chr10:5014339:C:T	rs4881375	C	T	C	Sox2_MA0143.3	16	0	-	0	0	.
chr10	5094358	5094359	chr10:5094359:G:T	rs28943578	G	T	g	Sox2_MA0143.3	-19	0	+	0	0	.
chr10	5094386	5094387	chr10:5094387:T:C	rs782813121	T	C	T	Sox2_MA0143.3	9	0	+	0	0	.
chr10	5110051	5110052	chr10:5110052:G:A	rs6601907	G	A	g	Sox2_MA0143.3	-16	0	+	0	0	.
chr10	5137994	5137995	chr10:5137995:G:T	rs2398207	G	T	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr10	5163861	5163862	chr10:5163862:G:A	rs1334739	G	A	.	Sox2_MA0143.3	21	0	+	0	0	.
chr10	5240285	5240286	chr10:5240286:G:A	rs4339944	G	A	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr10	5423865	5423866	chr10:5423866:T:C	rs4881438	T	C	T	Sox2_MA0143.3	6	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr10	5423872	5423873	chr10:5423873:G:C	rs4881439	G	C	A	Sox2_MA0143.3	13	0	+	0	0	.
chr10	5465411	5465412	chr10:5465412:G:T	rs745759285	G	T	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr10	5481640	5481641	chr10:5481641:A:G	rs7072413	A	G	A	Sox2_MA0143.3	14	0	-	0	0	.
chr10	5548411	5548412	chr10:5548412:C:T	rs368127030	C	T	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr10	5562491	5562492	chr10:5562492:G:T	rs76057088	G	T	G	Sox2_MA0143.3	-3	0	-	0	0	.
chr10	5571687	5571688	chr10:5571688:C:T	rs75001931	C	T	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr10	5577983	5577984	chr10:5577984:C:T	rs930997926	C	T	C	Sox2_MA0143.3	0	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr10	5580462	5580463	chr10:5580463:T:C	rs72781967	T	C	T	Sox2_MA0143.3	-15	0	+	0	0	.
chr10	5595064	5595065	chr10:5595065:T:C	rs28973176	T	C	T	Sox2_MA0143.3	3	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr10	5629654	5629655	chr10:5629655:G:A	rs114990517	G	A	N	Sox2_MA0143.3	-16	0	-	0	0	.
chr10	5636029	5636030	chr10:5636030:C:T	rs72772127	C	T	-	Sox2_MA0143.3	-13	0	+	0	0	.
chr10	5810910	5810911	chr10:5810911:T:C	rs1003212306	T	C	T	Sox2_MA0143.3	-7	0	-	0	0	.
chr10	5837675	5837676	chr10:5837676:T:G	rs72774114	T	G	T	Sox2_MA0143.3	12	0	-	0	0	.
chr10	5841344	5841345	chr10:5841345:G:T	rs1106038	G	T	T	Sox2_MA0143.3	-17	0	+	0	0	.
chr10	5856134	5856135	chr10:5856135:G:T	rs12774966	G	T	T	Sox2_MA0143.3	17	0	-	0	0	.
chr10	5856157	5856158	chr10:5856158:A:G	rs12784539	A	G	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr10	5944819	5944820	chr10:5944820:T:A	rs79357413	T	A	T	Sox2_MA0143.3	-20	0	+	0	0	.
chr10	5959732	5959733	chr10:5959733:C:T	rs3136618	C	T	T	Sox2_MA0143.3	9	0	-	0	0	.
chr10	5961752	5961753	chr10:5961753:G:A	rs8177783	G	A	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr10	5961762	5961763	chr10:5961763:T:C	rs41294161	T	C	T	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr10	5962048	5962049	chr10:5962049:T:C	rs8177692	T	C	T	Sox2_MA0143.3	6	1	+	8.676919043985553	1.7681642646703326	CCATTGTG
chr10	5981502	5981503	chr10:5981503:T:C	rs8177614	T	C	T	Sox2_MA0143.3	9	0	-	0	0	.
chr10	6011322	6011323	chr10:6011323:G:A	rs12722604	G	A	G	Sox2_MA0143.3	19	0	-	0	0	.
chr10	6055662	6055663	chr10:6055663:T:C	rs535880719	T	C	-	Sox2_MA0143.3	-18	0	+	0	0	.
chr10	6079321	6079322	chr10:6079322:G:A	rs62626325	G	A	A	Sox2_MA0143.3	-15	0	+	0	0	.
chr10	6079322	6079323	chr10:6079323:T:C	rs62626326	T	C	T	Sox2_MA0143.3	-14	0	+	0	0	.
chr10	6136977	6136978	chr10:6136978:T:C	rs11598494	T	C	T	Sox2_MA0143.3	-19	0	-	0	0	.
chr10	6157690	6157691	chr10:6157691:A:G	rs77536518	A	G	A	Sox2_MA0143.3	-20	0	-	0	0	.
chr10	6188412	6188413	chr10:6188413:C:T	rs60925594	C	T	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr10	6191336	6191337	chr10:6191337:G:A	rs681966	G	A	G	Sox2_MA0143.3	21	0	-	0	0	.
chr10	6203166	6203167	chr10:6203167:C:G	rs548865023	C	G	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr10	6203413	6203414	chr10:6203414:G:C	rs144540346	G	C	G	Sox2_MA0143.3	25	0	+	0	0	.
chr10	6218803	6218804	chr10:6218804:T:C	rs192798787	T	C	T	Sox2_MA0143.3	25	0	+	0	0	.
chr10	6219740	6219741	chr10:6219741:T:C	rs1557111	T	C	T	Sox2_MA0143.3	27	0	-	0	0	.
chr10	6228654	6228655	chr10:6228655:A:T	rs56341765	A	T	A	Sox2_MA0143.3	27	0	+	0	0	.
chr10	6292810	6292811	chr10:6292811:T:C	rs57572880	T	C	t	Sox2_MA0143.3	2	1	-	8.676919043985553	2.5582713367092715	CCATTGTG
chr10	6350044	6350045	chr10:6350045:T:C	rs7090696	T	C	C	Sox2_MA0143.3	27	0	-	0	0	.
chr10	6381085	6381086	chr10:6381086:G:A	rs4520490	G	A	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr10	6564940	6564941	chr10:6564941:C:T	rs148051273	C	T	C	Sox2_MA0143.3	11	0	+	0	0	.
chr10	6755243	6755244	chr10:6755244:G:T	rs1837976	G	T	T	Sox2_MA0143.3	1	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr10	6771393	6771394	chr10:6771394:T:G	rs2249961	T	G	T	Sox2_MA0143.3	2	1	+	9.206767037375712	2.900948058900136	CCTTTGTC
chr10	6830664	6830665	chr10:6830665:C:T	rs35180044	C	T	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr10	6875117	6875118	chr10:6875118:T:A	rs1372800	T	A	A	Sox2_MA0143.3	17	0	+	0	0	.
chr10	6876000	6876001	chr10:6876001:T:C	rs117715792	T	C	T	Sox2_MA0143.3	6	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr10	7123833	7123834	chr10:7123834:A:G	rs2762570	A	G	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr10	7130460	7130461	chr10:7130461:A:G	rs2762562	A	G	A	Sox2_MA0143.3	15	0	+	0	0	.
chr10	7260036	7260037	chr10:7260037:A:G	rs12221209	A	G	A	Sox2_MA0143.3	-9	0	-	0	0	.
chr10	7312721	7312722	chr10:7312722:G:A	rs17334831	G	A	G	Sox2_MA0143.3	17	0	-	0	0	.
chr10	7449937	7449938	chr10:7449938:C:T	rs117127404	C	T	C	Sox2_MA0143.3	0	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr10	7492748	7492749	chr10:7492749:C:T	rs2892444	C	T	C	Sox2_MA0143.3	16	0	+	0	0	.
chr10	7494252	7494253	chr10:7494253:G:T	rs2388138	G	T	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr10	7525638	7525639	chr10:7525639:T:G	rs114110871	T	G	T	Sox2_MA0143.3	14	0	+	0	0	.
chr10	7536419	7536420	chr10:7536420:A:G	rs7923229	A	G	G	Sox2_MA0143.3	15	0	-	0	0	.
chr10	7563968	7563969	chr10:7563969:A:G	rs4749017	A	G	G	Sox2_MA0143.3	12	0	-	0	0	.
chr10	7650016	7650017	chr10:7650017:T:G	rs61834802	T	G	T	Sox2_MA0143.3	25	0	-	0	0	.
chr10	7790887	7790888	chr10:7790888:G:A	rs2778475	G	A	A	Sox2_MA0143.3	-2	0	-	0	0	.
chr10	7857267	7857268	chr10:7857268:C:T	rs10905239	C	T	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr10	7861627	7861628	chr10:7861628:A:G	rs1314661	A	G	G	Sox2_MA0143.3	-12	0	+	0	0	.
chr10	7909033	7909034	chr10:7909034:T:C	rs12219547	T	C	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr10	7928093	7928094	chr10:7928094:T:C	rs79402200	T	C	T	Sox2_MA0143.3	-13	0	-	0	0	.
chr10	7941568	7941569	chr10:7941569:A:G	rs10795578	A	G	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr10	7962618	7962619	chr10:7962619:A:C	rs7922353	A	C	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr10	8017460	8017461	chr10:8017461:G:A	rs60423784	G	A	g	Sox2_MA0143.3	9	0	-	0	0	.
chr10	8042090	8042091	chr10:8042091:C:T	rs55687581	C	T	C	Sox2_MA0143.3	19	0	-	0	0	.
chr10	8086347	8086348	chr10:8086348:T:A	rs794659	T	A	T	Sox2_MA0143.3	2	1	-	8.676919043985553	8.864090315184848	CCATTGTG
chr10	8088472	8088473	chr10:8088473:T:C	rs1778060	T	C	T	Sox2_MA0143.3	-12	0	-	0	0	.
chr10	8116904	8116905	chr10:8116905:C:G	rs17143246	C	G	C	Sox2_MA0143.3	20	0	-	0	0	.
chr10	8193669	8193670	chr10:8193670:C:G	rs533939	C	G	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr10	8306785	8306786	chr10:8306786:G:A	rs112796792	G	A	G	Sox2_MA0143.3	10	0	-	0	0	.
chr10	8406429	8406430	chr10:8406430:C:T	rs10905356	C	T	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr10	8413955	8413956	chr10:8413956:T:C	rs2454057	T	C	T	Sox2_MA0143.3	26	0	+	0	0	.
chr10	8418701	8418702	chr10:8418702:C:T	rs6602301	C	T	C	Sox2_MA0143.3	12	0	+	0	0	.
chr10	8554446	8554447	chr10:8554447:T:G	rs1359576	T	G	T	Sox2_MA0143.3	-7	0	-	0	0	.
chr10	8639852	8639853	chr10:8639853:A:G	rs1031556649	A	G	A	Sox2_MA0143.3	-18	0	-	0	0	.
chr10	8719832	8719833	chr10:8719833:G:A	rs11255869	G	A	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr10	9110741	9110742	chr10:9110742:T:C	rs17364530	T	C	T	Sox2_MA0143.3	2	1	-	9.019595766176417	2.900948058900136	CCATTGTC
chr10	9281247	9281248	chr10:9281248:T:G	rs1149963	T	G	T	Sox2_MA0143.3	-12	0	+	0	0	.
chr10	9449733	9449734	chr10:9449734:C:G	rs140239199	C	G	C	Sox2_MA0143.3	7	1	+	9.206767037375712	8.864090315184848	CCTTTGTC
chr10	9510856	9510857	chr10:9510857:C:A	rs997376354	C	A	C	Sox2_MA0143.3	14	0	+	0	0	.
chr10	9731990	9731991	chr10:9731991:G:T	rs72775313	G	T	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr10	10043200	10043201	chr10:10043201:G:A	rs2657506	G	A	A	Sox2_MA0143.3	12	0	-	0	0	.
chr10	10321229	10321230	chr10:10321230:C:A	rs59289009	C	A	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr10	10394171	10394172	chr10:10394172:T:C	rs9424079	T	C	T	Sox2_MA0143.3	18	0	-	0	0	.
chr10	10463805	10463806	chr10:10463806:C:T	rs1324314	C	T	T	Sox2_MA0143.3	-15	0	+	0	0	.
chr10	10564259	10564260	chr10:10564260:C:T	rs77542540	C	T	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr10	10575358	10575359	chr10:10575359:G:C	rs7908192	G	C	G	Sox2_MA0143.3	-5	0	+	0	0	.
chr10	10607530	10607531	chr10:10607531:T:C	rs10905764	T	C	T	Sox2_MA0143.3	2	1	-	8.676919043985553	2.5582713367092715	CCATTGTG
chr10	10610701	10610702	chr10:10610702:G:A	rs4749972	G	A	A	Sox2_MA0143.3	24	0	-	0	0	.
chr10	10613216	10613217	chr10:10613217:G:C	rs4747870	G	C	C	Sox2_MA0143.3	-12	0	-	0	0	.
chr10	10752946	10752947	chr10:10752947:T:C	rs10905808	T	C	T	Sox2_MA0143.3	-5	0	+	0	0	.
chr10	10826373	10826374	chr10:10826374:T:A	rs191367479	T	A	T	Sox2_MA0143.3	2	1	-	8.676919043985553	8.864090315184848	CCATTGTG
chr10	10911311	10911312	chr10:10911312:C:A	rs114005268	C	A	C	Sox2_MA0143.3	5	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr10	10918615	10918616	chr10:10918616:A:C	chr10:10918616:A:C	A	C	A	Sox2_MA0143.3	12	0	+	0	0	.
chr10	10918626	10918627	chr10:10918627:T:C	chr10:10918627:T:C	T	C	T	Sox2_MA0143.3	23	0	+	0	0	.
chr10	11046957	11046958	chr10:11046958:T:C	rs1291877	T	C	T	Sox2_MA0143.3	-8	0	+	0	0	.
chr10	11110713	11110714	chr10:11110714:T:C	rs78599017	T	C	C	Sox2_MA0143.3	9	0	-	0	0	.
chr10	11163212	11163213	chr10:11163213:C:T	rs666330	C	T	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr10	11163237	11163238	chr10:11163238:C:T	rs886700311	C	T	C	Sox2_MA0143.3	23	0	+	0	0	.
chr10	11164731	11164732	chr10:11164732:A:G	rs541294852	A	G	A	Sox2_MA0143.3	-2	0	+	0	0	.
chr10	11169664	11169665	chr10:11169665:C:A	rs673339	C	A	A	Sox2_MA0143.3	13	0	+	0	0	.
chr10	11239299	11239300	chr10:11239300:A:G	rs10905921	A	G	A	Sox2_MA0143.3	-4	0	-	0	0	.
chr10	11269647	11269648	chr10:11269648:A:G	rs7911526	A	G	A	Sox2_MA0143.3	4	1	-	8.864090315184848	1.9553355358696274	CCTTTGTG
chr10	11355752	11355753	chr10:11355753:C:A	rs12775688	C	A	A	Sox2_MA0143.3	1	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr10	11388037	11388038	chr10:11388038:G:A	rs4747906	G	A	G	Sox2_MA0143.3	13	0	-	0	0	.
chr10	11406858	11406859	chr10:11406859:T:C	rs2455600	T	C	T	Sox2_MA0143.3	23	0	-	0	0	.
chr10	11409013	11409014	chr10:11409014:C:T	rs11257084	C	T	c	Sox2_MA0143.3	-3	0	+	0	0	.
chr10	11409014	11409015	chr10:11409015:C:G	rs11257085	C	G	c	Sox2_MA0143.3	-2	0	+	0	0	.
chr10	11513904	11513905	chr10:11513905:C:A	rs61844562	C	A	C	Sox2_MA0143.3	18	0	+	0	0	.
chr10	11640288	11640289	chr10:11640289:G:A	rs7099997	G	A	A	Sox2_MA0143.3	15	0	+	0	0	.
chr10	11663384	11663385	chr10:11663385:C:T	rs145615215	C	T	C	Sox2_MA0143.3	27	0	-	0	0	.
chr10	11673636	11673637	chr10:11673637:A:G	rs11257236	A	G	A	Sox2_MA0143.3	10	0	+	0	0	.
chr10	11704204	11704205	chr10:11704205:C:T	rs55753605	C	T	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr10	11714411	11714412	chr10:11714412:C:T	rs79094203	C	T	C	Sox2_MA0143.3	5	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr10	11721473	11721474	chr10:11721474:C:T	rs12266200	C	T	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr10	11742012	11742013	chr10:11742013:A:G	rs112790705	A	G	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr10	11745271	11745272	chr10:11745272:A:G	rs1886387	A	G	G	Sox2_MA0143.3	4	1	-	8.676919043985553	1.7681642646703322	CCATTGTG
chr10	11745280	11745281	chr10:11745281:G:A	rs1886388	G	A	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr10	11851971	11851972	chr10:11851972:T:G	rs7079747	T	G	T	Sox2_MA0143.3	4	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr10	11856032	11856033	chr10:11856033:A:G	rs80195148	A	G	A	Sox2_MA0143.3	3	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr10	11881603	11881604	chr10:11881604:C:T	rs145429768	C	T	c	Sox2_MA0143.3	8	0	+	0	0	.
chr10	11883598	11883599	chr10:11883599:A:T	rs11257379	A	T	A	Sox2_MA0143.3	-15	0	-	0	0	.
chr10	11913419	11913420	chr10:11913420:C:A	rs115292195	C	A	C	Sox2_MA0143.3	22	0	-	0	0	.
chr10	12022869	12022870	chr10:12022870:A:G	rs10795919	A	G	A	Sox2_MA0143.3	6	1	-	9.613475778572903	2.7047209992576837	CCATTGTT
chr10	12069466	12069467	chr10:12069467:C:T	rs192874583	C	T	C	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr10	12112833	12112834	chr10:12112834:C:T	rs1701470	C	T	C	Sox2_MA0143.3	1	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr10	12242397	12242398	chr10:12242398:A:T	rs117334547	A	T	A	Sox2_MA0143.3	10	0	+	0	0	.
chr10	12265611	12265612	chr10:12265612:C:T	rs11257654	C	T	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr10	12265742	12265743	chr10:12265743:G:A	rs114406376	G	A	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr10	12265745	12265746	chr10:12265746:C:T	rs1320197	C	T	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr10	12295669	12295670	chr10:12295670:C:G	rs12414902	C	G	C	Sox2_MA0143.3	12	0	+	0	0	.
chr10	12301629	12301630	chr10:12301630:A:G	rs2096396	A	G	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr10	12360394	12360395	chr10:12360395:A:T	rs7909493	A	T	A	Sox2_MA0143.3	26	0	+	0	0	.
chr10	12376689	12376690	chr10:12376690:T:C	rs140718198	T	C	T	Sox2_MA0143.3	-16	0	+	0	0	.
chr10	12545907	12545908	chr10:12545908:G:A	chr10:12545908:G:A	G	A	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr10	12549754	12549755	chr10:12549755:A:G	rs35124590	A	G	A	Sox2_MA0143.3	24	0	-	0	0	.
chr10	12549798	12549799	chr10:12549799:C:T	rs7071971	C	T	C	Sox2_MA0143.3	-20	0	-	0	0	.
chr10	12553147	12553148	chr10:12553148:C:T	rs2895524	C	T	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr10	12612198	12612199	chr10:12612199:A:G	rs7902494	A	G	A	Sox2_MA0143.3	2	1	-	9.800647049772198	3.494828071296623	CCTTTGTT
chr10	12751822	12751823	chr10:12751823:A:G	rs74118567	A	G	a	Sox2_MA0143.3	-5	0	+	0	0	.
chr10	12784984	12784985	chr10:12784985:T:G	rs45609732	T	G	T	Sox2_MA0143.3	-10	0	+	0	0	.
chr10	12807248	12807249	chr10:12807249:G:T	rs11258001	G	T	G	Sox2_MA0143.3	26	0	+	0	0	.
chr10	12818038	12818039	chr10:12818039:A:G	rs1644419	A	G	G	Sox2_MA0143.3	19	0	+	0	0	.
chr10	12818040	12818041	chr10:12818041:G:C	rs1644420	G	C	G	Sox2_MA0143.3	21	0	+	0	0	.
chr10	12907078	12907079	chr10:12907079:G:T	rs12266955	G	T	G	Sox2_MA0143.3	5	1	+	9.019595766176417	2.110840986861197	CCATTGTC
chr10	12922999	12923000	chr10:12923000:T:C	rs17501418	T	C	C	Sox2_MA0143.3	20	0	+	0	0	.
chr10	12946173	12946174	chr10:12946174:T:A	rs56344609	T	A	T	Sox2_MA0143.3	-17	0	-	0	0	.
chr10	13241806	13241807	chr10:13241807:A:G	rs17152990	A	G	A	Sox2_MA0143.3	3	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr10	13271814	13271815	chr10:13271815:A:G	rs570535052	A	G	A	Sox2_MA0143.3	-16	0	+	0	0	.
chr10	13327845	13327846	chr10:13327846:C:T	rs10737070	C	T	t	Sox2_MA0143.3	-5	0	-	0	0	.
chr10	13347286	13347287	chr10:13347287:G:A	rs1161975794	G	A	.	Sox2_MA0143.3	13	0	-	0	0	.
chr10	13347290	13347291	chr10:13347291:C:T	rs117874450	C	T	.	Sox2_MA0143.3	9	0	-	0	0	.
chr10	13438788	13438789	chr10:13438789:A:G	rs4750356	A	G	A	Sox2_MA0143.3	-4	0	-	0	0	.
chr10	13536862	13536863	chr10:13536863:T:C	rs10796090	T	C	T	Sox2_MA0143.3	15	0	-	0	0	.
chr10	13625730	13625731	chr10:13625731:G:T	rs7089227	G	T	g	Sox2_MA0143.3	13	0	-	0	0	.
chr10	13636856	13636857	chr10:13636857:C:T	rs7908023	C	T	T	Sox2_MA0143.3	-8	0	-	0	0	.
chr10	13642704	13642705	chr10:13642705:G:A	rs11258492	G	A	A	Sox2_MA0143.3	-18	0	+	0	0	.
chr10	13665236	13665237	chr10:13665237:G:A	rs4531355	G	A	G	Sox2_MA0143.3	16	0	+	0	0	.
chr10	13690696	13690697	chr10:13690697:G:C	rs191316322	G	C	G	Sox2_MA0143.3	26	0	-	0	0	.
chr10	13700029	13700030	chr10:13700030:A:G	rs78688649	A	G	A	Sox2_MA0143.3	-9	0	-	0	0	.
chr10	13705511	13705512	chr10:13705512:C:T	rs72769526	C	T	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr10	13707414	13707415	chr10:13707415:C:T	chr10:13707415:C:T	C	T	C	Sox2_MA0143.3	26	0	+	0	0	.
chr10	13759268	13759269	chr10:13759269:A:G	rs4424567	A	G	A	Sox2_MA0143.3	-19	0	+	0	0	.
chr10	13775943	13775944	chr10:13775944:G:A	rs2049745	G	A	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr10	13789711	13789712	chr10:13789712:A:G	rs1881584	A	G	A	Sox2_MA0143.3	3	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr10	13799755	13799756	chr10:13799756:A:C	rs77225698	A	C	a	Sox2_MA0143.3	21	0	+	0	0	.
chr10	13834468	13834469	chr10:13834469:G:A	rs10796135	G	A	A	Sox2_MA0143.3	23	0	+	0	0	.
chr10	13860341	13860342	chr10:13860342:T:C	rs61833456	T	C	T	Sox2_MA0143.3	27	0	-	0	0	.
chr10	13882500	13882501	chr10:13882501:T:G	rs141234971	T	G	T	Sox2_MA0143.3	-16	0	-	0	0	.
chr10	13925166	13925167	chr10:13925167:C:G	rs2797860	C	G	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr10	13929375	13929376	chr10:13929376:T:C	rs2797886	T	C	C	Sox2_MA0143.3	8	0	+	0	0	.
chr10	13991728	13991729	chr10:13991729:G:A	rs7903719	G	A	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr10	14005923	14005924	chr10:14005924:C:T	rs1841557	C	T	C	Sox2_MA0143.3	27	0	-	0	0	.
chr10	14010026	14010027	chr10:14010027:A:G	rs10906564	A	G	A	Sox2_MA0143.3	17	0	-	0	0	.
chr10	14010053	14010054	chr10:14010054:C:T	rs2446589	C	T	T	Sox2_MA0143.3	-10	0	-	0	0	.
chr10	14040445	14040446	chr10:14040446:A:G	rs117436915	A	G	A	Sox2_MA0143.3	18	0	+	0	0	.
chr10	14118000	14118001	chr10:14118001:C:T	rs1409747	C	T	C	Sox2_MA0143.3	20	0	+	0	0	.
chr10	14358961	14358962	chr10:14358962:A:C	rs78512518	A	C	A	Sox2_MA0143.3	3	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr10	14379851	14379852	chr10:14379852:C:A	rs648364	C	A	A	Sox2_MA0143.3	-7	0	+	0	0	.
chr10	14392737	14392738	chr10:14392738:T:A	rs113542180	T	A	T	Sox2_MA0143.3	-2	0	+	0	0	.
chr10	14436176	14436177	chr10:14436177:G:A	rs10796190	G	A	A	Sox2_MA0143.3	15	0	-	0	0	.
chr10	14477623	14477624	chr10:14477624:A:G	rs942933	A	G	A	Sox2_MA0143.3	10	0	-	0	0	.
chr10	14499466	14499467	chr10:14499467:C:T	rs7918705	C	T	C	Sox2_MA0143.3	-20	0	-	0	0	.
chr10	14554647	14554648	chr10:14554648:G:A	rs116051448	G	A	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr10	14560490	14560491	chr10:14560491:G:A	rs1026477945	G	A	G	Sox2_MA0143.3	19	0	-	0	0	.
chr10	14565243	14565244	chr10:14565244:C:T	rs114607928	C	T	C	Sox2_MA0143.3	8	0	-	0	0	.
chr10	14575604	14575605	chr10:14575605:G:C	rs7910322	G	C	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr10	14595067	14595068	chr10:14595068:C:T	rs4750537	C	T	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr10	14605779	14605780	chr10:14605780:A:G	rs10732259	A	G	G	Sox2_MA0143.3	7	1	-	9.613475778572903	9.019595766176417	CCATTGTT
chr10	14624221	14624222	chr10:14624222:T:C	rs10906717	T	C	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr10	14625464	14625465	chr10:14625465:C:T	rs56137103	C	T	C	Sox2_MA0143.3	12	0	+	0	0	.
chr10	14691465	14691466	chr10:14691466:G:A	rs3107803	G	A	G	Sox2_MA0143.3	12	0	-	0	0	.
chr10	14703120	14703121	chr10:14703121:C:T	rs4748106	C	T	C	Sox2_MA0143.3	8	0	-	0	0	.
chr10	14703139	14703140	chr10:14703140:A:G	rs55954679	A	G	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr10	14742890	14742891	chr10:14742891:C:A	rs2609811	C	A	A	Sox2_MA0143.3	17	0	-	0	0	.
chr10	14887173	14887174	chr10:14887174:A:G	rs17156020	A	G	A	Sox2_MA0143.3	10	0	-	0	0	.
chr10	14991251	14991252	chr10:14991252:T:C	rs187260758	T	C	-	Sox2_MA0143.3	8	0	-	0	0	.
chr10	15119274	15119275	chr10:15119275:A:C	rs10906832	A	C	C	Sox2_MA0143.3	25	0	-	0	0	.
chr10	15183350	15183351	chr10:15183351:A:G	rs10906851	A	G	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr10	15222447	15222448	chr10:15222448:G:A	rs75602301	G	A	G	Sox2_MA0143.3	11	0	-	0	0	.
chr10	15304126	15304127	chr10:15304127:A:G	rs7089044	A	G	A	Sox2_MA0143.3	-16	0	-	0	0	.
chr10	15344924	15344925	chr10:15344925:G:C	rs17156572	G	C	G	Sox2_MA0143.3	24	0	-	0	0	.
chr10	15344981	15344982	chr10:15344982:C:T	rs143100064	C	T	C	Sox2_MA0143.3	13	0	-	0	0	.
chr10	15764371	15764372	chr10:15764372:C:T	rs11818485	C	T	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr10	16105440	16105441	chr10:16105441:A:G	rs1417097	A	G	G	Sox2_MA0143.3	-5	0	+	0	0	.
chr10	16741674	16741675	chr10:16741675:C:A	rs2124106	C	A	C	Sox2_MA0143.3	25	0	-	0	0	.
chr10	16777585	16777586	chr10:16777586:A:G	rs187070289	A	G	A	Sox2_MA0143.3	-20	0	-	0	0	.
chr10	16777918	16777919	chr10:16777919:C:T	rs79543716	C	T	C	Sox2_MA0143.3	0	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr10	16790478	16790479	chr10:16790479:A:C	rs7912525	A	C	A	Sox2_MA0143.3	-15	0	-	0	0	.
chr10	16835583	16835584	chr10:16835584:G:A	rs117671666	G	A	G	Sox2_MA0143.3	8	0	+	0	0	.
chr10	16884640	16884641	chr10:16884641:G:A	rs11254262	G	A	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr10	16890384	16890385	chr10:16890385:G:A	rs45551835	G	A	G	Sox2_MA0143.3	-3	0	-	0	0	.
chr10	16934618	16934619	chr10:16934619:A:G	rs2883972	A	G	A	Sox2_MA0143.3	-7	0	+	0	0	.
chr10	16993394	16993395	chr10:16993395:A:G	rs3012478	A	G	G	Sox2_MA0143.3	25	0	+	0	0	.
chr10	17006435	17006436	chr10:17006436:G:C	rs55767134	G	C	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr10	17006898	17006899	chr10:17006899:C:T	rs910958221	C	T	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr10	17024186	17024187	chr10:17024187:A:G	rs1158975741	A	G	A	Sox2_MA0143.3	3	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr10	17121081	17121082	chr10:17121082:G:T	rs10795449	G	T	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr10	17190008	17190009	chr10:17190009:C:G	rs61841813	C	G	G	Sox2_MA0143.3	7	1	-	8.864090315184848	9.206767037375712	CCTTTGTG
chr10	17217567	17217568	chr10:17217568:C:T	rs7903137	C	T	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr10	17334463	17334464	chr10:17334464:A:G	rs113272176	A	G	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr10	17353583	17353584	chr10:17353584:A:T	rs45484299	A	T	A	Sox2_MA0143.3	6	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr10	17383824	17383825	chr10:17383825:A:T	rs438665	A	T	A	Sox2_MA0143.3	-6	0	+	0	0	.
chr10	17544609	17544610	chr10:17544610:T:C	rs12255594	T	C	T	Sox2_MA0143.3	25	0	+	0	0	.
chr10	17561206	17561207	chr10:17561207:C:A	rs75619010	C	A	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr10	17788968	17788969	chr10:17788969:G:A	rs144089079	G	A	A	Sox2_MA0143.3	-4	0	+	0	0	.
chr10	17907663	17907664	chr10:17907664:A:T	rs529003	A	T	T	Sox2_MA0143.3	11	0	-	0	0	.
chr10	17987879	17987880	chr10:17987880:C:G	rs12413168	C	G	G	Sox2_MA0143.3	5	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr10	17988673	17988674	chr10:17988674:A:G	rs79053745	A	G	A	Sox2_MA0143.3	16	0	-	0	0	.
chr10	18022019	18022020	chr10:18022020:C:T	rs67552121	C	T	C	Sox2_MA0143.3	13	0	+	0	0	.
chr10	18059618	18059619	chr10:18059619:T:C	rs11595997	T	C	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr10	18059624	18059625	chr10:18059625:G:T	rs11592978	G	T	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr10	18159392	18159393	chr10:18159393:G:A	rs11012838	G	A	A	Sox2_MA0143.3	5	1	+	9.613475778572903	2.7047209992576837	CCATTGTT
chr10	18159408	18159409	chr10:18159409:G:C	rs11012839	G	C	G	Sox2_MA0143.3	21	0	+	0	0	.
chr10	18209231	18209232	chr10:18209232:T:G	rs539314177	T	G	T	Sox2_MA0143.3	13	0	-	0	0	.
chr10	18222988	18222989	chr10:18222989:T:G	rs7896607	T	G	G	Sox2_MA0143.3	2	1	+	9.800647049772198	3.494828071296623	CCTTTGTT
chr10	18261566	18261567	chr10:18261567:G:A	rs61844245	G	A	A	Sox2_MA0143.3	-19	0	+	0	0	.
chr10	18264735	18264736	chr10:18264736:G:T	rs10764373	G	T	G	Sox2_MA0143.3	5	1	+	8.676919043985553	1.7681642646703324	CCATTGTG
chr10	18290932	18290933	chr10:18290933:C:G	rs7083373	C	G	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr10	18334713	18334714	chr10:18334714:A:G	rs78417590	A	G	A	Sox2_MA0143.3	3	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr10	18392236	18392237	chr10:18392237:C:G	rs1012227	C	G	C	Sox2_MA0143.3	9	0	-	0	0	.
chr10	18501774	18501775	chr10:18501775:G:A	rs61839302	G	A	G	Sox2_MA0143.3	25	0	+	0	0	.
chr10	18659424	18659425	chr10:18659425:G:T	rs186161641	G	T	G	Sox2_MA0143.3	24	0	-	0	0	.
chr10	18659426	18659427	chr10:18659427:G:T	chr10:18659427:G:T	G	T	G	Sox2_MA0143.3	22	0	-	0	0	.
chr10	18659432	18659433	chr10:18659433:T:C	rs559143102	T	C	T	Sox2_MA0143.3	16	0	-	0	0	.
chr10	18684897	18684898	chr10:18684898:T:C	rs7084709	T	C	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr10	18693101	18693102	chr10:18693102:G:A	rs4488098	G	A	g	Sox2_MA0143.3	13	0	+	0	0	.
chr10	18723946	18723947	chr10:18723947:C:A	rs12258053	C	A	C	Sox2_MA0143.3	0	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr10	18723960	18723961	chr10:18723961:G:A	rs12413511	G	A	A	Sox2_MA0143.3	14	0	+	0	0	.
chr10	18918516	18918517	chr10:18918517:T:C	rs1887924	T	C	T	Sox2_MA0143.3	-14	0	-	0	0	.
chr10	19334026	19334027	chr10:19334027:T:C	rs7083912	T	C	T	Sox2_MA0143.3	-18	0	+	0	0	.
chr10	19468808	19468809	chr10:19468809:C:G	rs3904902	C	G	C	Sox2_MA0143.3	1	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr10	19654685	19654686	chr10:19654686:T:C	rs1409744	T	C	t	Sox2_MA0143.3	-12	0	+	0	0	.
chr10	19654686	19654687	chr10:19654687:G:A	rs1409743	G	A	G	Sox2_MA0143.3	-11	0	+	0	0	.
chr10	19961684	19961685	chr10:19961685:G:A	rs187418452	G	A	G	Sox2_MA0143.3	19	0	-	0	0	.
chr10	20034995	20034996	chr10:20034996:C:G	rs78019939	C	G	C	Sox2_MA0143.3	23	0	-	0	0	.
chr10	20278069	20278070	chr10:20278070:G:T	rs72795943	G	T	G	Sox2_MA0143.3	20	0	+	0	0	.
chr10	20334812	20334813	chr10:20334813:G:A	rs1412557	G	A	G	Sox2_MA0143.3	19	0	-	0	0	.
chr10	20354339	20354340	chr10:20354340:A:G	rs551544994	A	G	A	Sox2_MA0143.3	9	0	+	0	0	.
chr10	20429056	20429057	chr10:20429057:A:T	rs56394272	A	T	T	Sox2_MA0143.3	-10	0	-	0	0	.
chr10	20617311	20617312	chr10:20617312:C:A	rs146936288	C	A	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr10	20745002	20745003	chr10:20745003:C:T	rs11012309	C	T	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr10	20772566	20772567	chr10:20772567:A:C	rs79065121	A	C	A	Sox2_MA0143.3	4	1	-	8.676919043985553	1.7681642646703322	CCATTGTG
chr10	21115600	21115601	chr10:21115601:A:G	rs11012530	A	G	A	Sox2_MA0143.3	-20	0	+	0	0	.
chr10	21115609	21115610	chr10:21115610:G:A	rs140127572	G	A	G	Sox2_MA0143.3	-11	0	+	0	0	.
chr10	21314831	21314832	chr10:21314832:T:A	rs541418735	T	A	T	Sox2_MA0143.3	-1	0	+	0	0	.
chr10	21337123	21337124	chr10:21337124:T:C	rs1461708361	T	C	T	Sox2_MA0143.3	2	1	+	9.206767037375712	2.900948058900136	CCTTTGTC
chr10	21361062	21361063	chr10:21361063:G:A	rs55953944	G	A	G	Sox2_MA0143.3	25	0	-	0	0	.
chr10	21496175	21496176	chr10:21496176:G:A	chr10:21496176:G:A	G	A	G	Sox2_MA0143.3	18	0	+	0	0	.
chr10	21522944	21522945	chr10:21522945:G:T	rs546715516	G	T	G	Sox2_MA0143.3	22	0	-	0	0	.
chr10	21798144	21798145	chr10:21798145:C:T	rs531764142	C	T	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr10	22055237	22055238	chr10:22055238:A:G	rs4592322	A	G	G	Sox2_MA0143.3	-12	0	+	0	0	.
chr10	22159155	22159156	chr10:22159156:C:T	rs12768091	C	T	t	Sox2_MA0143.3	-14	0	+	0	0	.
chr10	22259406	22259407	chr10:22259407:C:G	rs140395628	C	G	C	Sox2_MA0143.3	20	0	-	0	0	.
chr10	22318502	22318503	chr10:22318503:T:G	rs12241581	T	G	g	Sox2_MA0143.3	26	0	-	0	0	.
chr10	22321250	22321251	chr10:22321251:G:C	rs577461106	G	C	-	Sox2_MA0143.3	14	0	-	0	0	.
chr10	22475866	22475867	chr10:22475867:T:C	rs78881455	T	C	T	Sox2_MA0143.3	-8	0	+	0	0	.
chr10	22554181	22554182	chr10:22554182:C:G	rs12146350	C	G	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr10	22610750	22610751	chr10:22610751:A:C	rs80296405	A	C	A	Sox2_MA0143.3	25	0	-	0	0	.
chr10	22618545	22618546	chr10:22618546:A:C	rs16916117	A	C	A	Sox2_MA0143.3	-4	0	-	0	0	.
chr10	22619964	22619965	chr10:22619965:C:T	rs1326341	C	T	T	Sox2_MA0143.3	-20	0	-	0	0	.
chr10	22622603	22622604	chr10:22622604:T:C	rs779330740	T	C	T	Sox2_MA0143.3	17	0	-	0	0	.
chr10	22622629	22622630	chr10:22622630:T:C	rs111251969	T	C	T	Sox2_MA0143.3	-9	0	-	0	0	.
chr10	22650281	22650282	chr10:22650282:A:C	rs2766001	A	C	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr10	22927952	22927953	chr10:22927953:G:C	rs16916143	G	C	G	Sox2_MA0143.3	12	0	-	0	0	.
chr10	22993806	22993807	chr10:22993807:A:T	rs1382577	A	T	A	Sox2_MA0143.3	18	0	-	0	0	.
chr10	23145973	23145974	chr10:23145974:G:A	rs16923083	G	A	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr10	23517452	23517453	chr10:23517453:A:G	rs983990	A	G	A	Sox2_MA0143.3	25	0	-	0	0	.
chr10	23521221	23521222	chr10:23521222:G:T	rs11013549	G	T	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr10	23612113	23612114	chr10:23612114:G:C	rs10828518	G	C	G	Sox2_MA0143.3	0	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr10	23725920	23725921	chr10:23725921:G:T	rs6482325	G	T	T	Sox2_MA0143.3	24	0	+	0	0	.
chr10	23775558	23775559	chr10:23775559:T:C	rs7082976	T	C	C	Sox2_MA0143.3	25	0	+	0	0	.
chr10	23820898	23820899	chr10:23820899:C:T	rs2065789	C	T	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr10	23913340	23913341	chr10:23913341:G:A	rs17576460	G	A	A	Sox2_MA0143.3	7	1	-	9.206767037375712	9.800647049772198	CCTTTGTC
chr10	23917834	23917835	chr10:23917835:T:C	rs114631617	T	C	T	Sox2_MA0143.3	-4	0	+	0	0	.
chr10	24162325	24162326	chr10:24162326:C:G	rs537845520	C	G	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr10	24168497	24168498	chr10:24168498:G:A	rs114421692	G	A	A	Sox2_MA0143.3	9	0	+	0	0	.
chr10	24168504	24168505	chr10:24168505:G:A	rs79231022	G	A	G	Sox2_MA0143.3	16	0	+	0	0	.
chr10	24207768	24207769	chr10:24207769:C:A	rs147792937	C	A	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr10	24207787	24207788	chr10:24207788:G:T	rs111376927	G	T	G	Sox2_MA0143.3	5	1	+	9.206767037375712	2.298012258060492	CCTTTGTC
chr10	24214411	24214412	chr10:24214412:G:C	rs4550133	G	C	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr10	24215754	24215755	chr10:24215755:C:G	rs4481926	C	G	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr10	24251761	24251762	chr10:24251762:G:T	rs570766905	G	T	G	Sox2_MA0143.3	8	0	+	0	0	.
chr10	24306288	24306289	chr10:24306289:C:T	chr10:24306289:C:T	C	T	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr10	24386100	24386101	chr10:24386101:C:A	rs148863649	C	A	C	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr10	24391209	24391210	chr10:24391210:C:G	rs3858213	C	G	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr10	24412669	24412670	chr10:24412670:T:A	rs1462154607	T	A	t	Sox2_MA0143.3	10	0	+	0	0	.
chr10	24446926	24446927	chr10:24446927:T:C	rs117982560	T	C	T	Sox2_MA0143.3	18	0	+	0	0	.
chr10	24464498	24464499	chr10:24464499:T:C	rs77572951	T	C	T	Sox2_MA0143.3	16	0	+	0	0	.
chr10	24466693	24466694	chr10:24466694:T:G	rs16924796	T	G	T	Sox2_MA0143.3	22	0	-	0	0	.
chr10	24488705	24488706	chr10:24488706:G:A	rs2067887	G	A	A	Sox2_MA0143.3	19	0	+	0	0	.
chr10	24502426	24502427	chr10:24502427:A:G	rs1556405	A	G	A	Sox2_MA0143.3	13	0	+	0	0	.
chr10	24524524	24524525	chr10:24524525:G:A	rs10828663	G	A	G	Sox2_MA0143.3	27	0	+	0	0	.
chr10	24746510	24746511	chr10:24746511:C:T	rs11014222	C	T	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr10	24812092	24812093	chr10:24812093:C:A	rs540319111	C	A	C	Sox2_MA0143.3	7	1	-	8.676919043985553	9.613475778572903	CCATTGTG
chr10	24812093	24812094	chr10:24812094:A:T	rs560756954	A	T	A	Sox2_MA0143.3	6	1	-	8.676919043985553	1.7681642646703326	CCATTGTG
chr10	24905122	24905123	chr10:24905123:A:G	rs117437219	A	G	A	Sox2_MA0143.3	-8	0	+	0	0	.
chr10	24973395	24973396	chr10:24973396:G:A	rs146956652	G	A	G	Sox2_MA0143.3	-16	0	-	0	0	.
chr10	25068443	25068444	chr10:25068444:A:C	rs149914941	A	C	A	Sox2_MA0143.3	17	0	-	0	0	.
chr10	25068464	25068465	chr10:25068465:A:G	rs73608240	A	G	A	Sox2_MA0143.3	-4	0	-	0	0	.
chr10	25082626	25082627	chr10:25082627:T:C	rs12264258	T	C	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr10	25177763	25177764	chr10:25177764:A:C	rs1001948	A	C	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr10	25243041	25243042	chr10:25243042:C:T	rs1334059	C	T	C	Sox2_MA0143.3	10	0	-	0	0	.
chr10	25383387	25383388	chr10:25383388:A:T	rs72798044	A	T	A	Sox2_MA0143.3	-7	0	-	0	0	.
chr10	25383397	25383398	chr10:25383398:C:T	rs1760762	C	T	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr10	25383434	25383435	chr10:25383435:T:A	rs4351726	T	A	T	Sox2_MA0143.3	-8	0	+	0	0	.
chr10	25383458	25383459	chr10:25383459:A:G	rs1754255	A	G	G	Sox2_MA0143.3	16	0	+	0	0	.
chr10	25390808	25390809	chr10:25390809:T:A	rs1760733	T	A	A	Sox2_MA0143.3	18	0	-	0	0	.
chr10	25408991	25408992	chr10:25408992:T:C	rs10764543	T	C	C	Sox2_MA0143.3	21	0	-	0	0	.
chr10	25409018	25409019	chr10:25409019:C:T	rs566761532	C	T	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr10	25507633	25507634	chr10:25507634:G:C	rs146102771	G	C	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr10	25564651	25564652	chr10:25564652:G:C	rs1414042	G	C	C	Sox2_MA0143.3	27	0	+	0	0	.
chr10	25583165	25583166	chr10:25583166:T:C	rs11014629	T	C	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr10	25583169	25583170	chr10:25583170:C:A	rs11014630	C	A	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr10	25604652	25604653	chr10:25604653:C:A	rs1010341115	C	A	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr10	25726273	25726274	chr10:25726274:T:C	rs2442871	T	C	C	Sox2_MA0143.3	17	0	-	0	0	.
chr10	25813173	25813174	chr10:25813174:C:T	rs17737729	C	T	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr10	25813178	25813179	chr10:25813179:T:C	chr10:25813179:T:C	T	C	T	Sox2_MA0143.3	2	1	+	3.5547341015215945	-2.751084876953981	CCTTTGTA
chr10	25813180	25813181	chr10:25813181:T:A	chr10:25813181:T:A	T	A	T	Sox2_MA0143.3	4	1	+	3.5547341015215945	-3.3540206777936254	CCTTTGTA
chr10	25875282	25875283	chr10:25875283:G:A	rs61850080	G	A	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr10	25895767	25895768	chr10:25895768:T:C	rs7896978	T	C	T	Sox2_MA0143.3	-19	0	+	0	0	.
chr10	25896531	25896532	chr10:25896532:G:A	rs7908860	G	A	A	Sox2_MA0143.3	8	0	+	0	0	.
chr10	25896532	25896533	chr10:25896533:A:C	rs12766157	A	C	C	Sox2_MA0143.3	9	0	+	0	0	.
chr10	25960030	25960031	chr10:25960031:A:T	chr10:25960031:A:T	A	T	A	Sox2_MA0143.3	-1	0	-	0	0	.
chr10	26029971	26029972	chr10:26029972:G:A	rs17666162	G	A	G	Sox2_MA0143.3	15	0	+	0	0	.
chr10	26055064	26055065	chr10:26055065:A:C	rs72795848	A	C	A	Sox2_MA0143.3	3	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr10	26164780	26164781	chr10:26164781:A:G	rs79356191	A	G	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr10	26221546	26221547	chr10:26221547:A:G	rs3893052	A	G	A	Sox2_MA0143.3	3	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr10	26349787	26349788	chr10:26349788:G:A	rs59108984	G	A	A	Sox2_MA0143.3	-4	0	+	0	0	.
chr10	26367362	26367363	chr10:26367363:G:A	rs56363377	G	A	G	Sox2_MA0143.3	19	0	+	0	0	.
chr10	26450415	26450416	chr10:26450416:G:A	rs4747562	G	A	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr10	26454000	26454001	chr10:26454001:T:C	rs4518996	T	C	C	Sox2_MA0143.3	12	0	-	0	0	.
chr10	26477681	26477682	chr10:26477682:C:T	rs115657952	C	T	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr10	26499600	26499601	chr10:26499601:T:C	rs12413644	T	C	T	Sox2_MA0143.3	6	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr10	26879879	26879880	chr10:26879880:A:C	chr10:26879880:A:C	A	C	A	Sox2_MA0143.3	-10	0	-	0	0	.
chr10	27153317	27153318	chr10:27153318:G:C	rs788221	G	C	G	Sox2_MA0143.3	19	0	-	0	0	.
chr10	27455124	27455125	chr10:27455125:G:A	rs79824113	G	A	G	Sox2_MA0143.3	-2	0	+	0	0	.
chr10	27500304	27500305	chr10:27500305:G:T	rs12778569	G	T	G	Sox2_MA0143.3	18	0	+	0	0	.
chr10	27608838	27608839	chr10:27608839:C:T	rs78798707	C	T	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr10	27608839	27608840	chr10:27608840:A:G	rs1107307	A	G	G	Sox2_MA0143.3	-11	0	+	0	0	.
chr10	27612440	27612441	chr10:27612441:T:C	rs11015904	T	C	T	Sox2_MA0143.3	11	0	-	0	0	.
chr10	27634282	27634283	chr10:27634283:G:C	rs7095374	G	C	G	Sox2_MA0143.3	1	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr10	27791628	27791629	chr10:27791629:T:A	rs2815494	T	A	T	Sox2_MA0143.3	-16	0	-	0	0	.
chr10	27840457	27840458	chr10:27840458:A:C	rs77841606	A	C	A	Sox2_MA0143.3	18	0	+	0	0	.
chr10	28049250	28049251	chr10:28049251:G:T	rs12268684	G	T	T	Sox2_MA0143.3	14	0	+	0	0	.
chr10	28081073	28081074	chr10:28081074:C:T	rs2069202	C	T	T	Sox2_MA0143.3	19	0	-	0	0	.
chr10	28089424	28089425	chr10:28089425:G:A	rs11006851	G	A	G	Sox2_MA0143.3	26	0	-	0	0	.
chr10	28089462	28089463	chr10:28089463:C:T	rs11006852	C	T	C	Sox2_MA0143.3	-12	0	-	0	0	.
chr10	28092295	28092296	chr10:28092296:T:C	rs4749302	T	C	T	Sox2_MA0143.3	23	0	-	0	0	.
chr10	28156573	28156574	chr10:28156574:T:C	rs2997203	T	C	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr10	28282587	28282588	chr10:28282588:T:C	rs12413470	T	C	T	Sox2_MA0143.3	-14	0	-	0	0	.
chr10	28300135	28300136	chr10:28300136:A:G	rs577156527	A	G	A	Sox2_MA0143.3	-1	0	+	0	0	.
chr10	28449168	28449169	chr10:28449169:T:C	rs6481523	T	C	C	Sox2_MA0143.3	6	1	+	9.206767037375712	2.298012258060492	CCTTTGTC
chr10	28580799	28580800	chr10:28580800:T:C	rs332147	T	C	T	Sox2_MA0143.3	-15	0	+	0	0	.
chr10	28602506	28602507	chr10:28602507:A:G	rs115061170	A	G	A	Sox2_MA0143.3	-19	0	+	0	0	.
chr10	28648416	28648417	chr10:28648417:A:G	rs1961727	A	G	G	Sox2_MA0143.3	6	1	-	9.613475778572903	2.7047209992576837	CCATTGTT
chr10	28663763	28663764	chr10:28663764:C:T	rs7087577	C	T	C	Sox2_MA0143.3	-12	0	-	0	0	.
chr10	28663770	28663771	chr10:28663771:G:A	rs116562093	G	A	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr10	28688080	28688081	chr10:28688081:C:T	rs655766	C	T	C	Sox2_MA0143.3	14	0	+	0	0	.
chr10	28767698	28767699	chr10:28767699:C:A	rs787111	C	A	A	Sox2_MA0143.3	-11	0	-	0	0	.
chr10	28809231	28809232	chr10:28809232:T:C	rs11007252	T	C	T	Sox2_MA0143.3	-14	0	+	0	0	.
chr10	28811941	28811942	chr10:28811942:T:C	rs787332	T	C	T	Sox2_MA0143.3	14	0	-	0	0	.
chr10	28839859	28839860	chr10:28839860:C:G	chr10:28839860:C:G	C	G	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr10	28850665	28850666	chr10:28850666:G:A	rs787328	G	A	G	Sox2_MA0143.3	0	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr10	28850682	28850683	chr10:28850683:A:C	rs75345915	A	C	A	Sox2_MA0143.3	-17	0	-	0	0	.
chr10	28872183	28872184	chr10:28872184:G:A	rs1632622	G	A	a	Sox2_MA0143.3	14	0	+	0	0	.
chr10	28883554	28883555	chr10:28883555:G:A	rs76861731	G	A	g	Sox2_MA0143.3	12	0	+	0	0	.
chr10	28884523	28884524	chr10:28884524:A:G	rs189949417	A	G	a	Sox2_MA0143.3	-7	0	+	0	0	.
chr10	28906674	28906675	chr10:28906675:A:C	rs73609901	A	C	A	Sox2_MA0143.3	10	0	-	0	0	.
chr10	28976014	28976015	chr10:28976015:T:C	rs745975656	T	C	T	Sox2_MA0143.3	8	0	+	0	0	.
chr10	28976015	28976016	chr10:28976016:T:A	rs71489639	T	A	T	Sox2_MA0143.3	9	0	+	0	0	.
chr10	28993372	28993373	chr10:28993373:G:A	rs1248423	G	A	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr10	28997609	28997610	chr10:28997610:A:T	rs11007347	A	T	A	Sox2_MA0143.3	4	1	-	9.800647049772198	2.8918922704569785	CCTTTGTT
chr10	28997975	28997976	chr10:28997976:G:A	rs148368827	G	A	G	Sox2_MA0143.3	-3	0	+	0	0	.
chr10	29008755	29008756	chr10:29008756:C:T	rs2783585	C	T	C	Sox2_MA0143.3	10	0	-	0	0	.
chr10	29127608	29127609	chr10:29127609:G:A	rs2783426	G	A	G	Sox2_MA0143.3	0	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr10	29131792	29131793	chr10:29131793:G:A	rs111241544	G	A	G	Sox2_MA0143.3	24	0	-	0	0	.
chr10	29205810	29205811	chr10:29205811:C:A	rs61839177	C	A	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr10	29255039	29255040	chr10:29255040:G:A	rs147740798	G	A	G	Sox2_MA0143.3	27	0	+	0	0	.
chr10	29288994	29288995	chr10:29288995:G:C	rs2768670	G	C	G	Sox2_MA0143.3	26	0	-	0	0	.
chr10	29304408	29304409	chr10:29304409:A:G	rs7100281	A	G	G	Sox2_MA0143.3	15	0	+	0	0	.
chr10	29353540	29353541	chr10:29353541:A:G	rs74500848	A	G	A	Sox2_MA0143.3	-9	0	-	0	0	.
chr10	29386608	29386609	chr10:29386609:G:C	rs74129224	G	C	C	Sox2_MA0143.3	27	0	-	0	0	.
chr10	29410444	29410445	chr10:29410445:A:G	rs193292627	A	G	A	Sox2_MA0143.3	3	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr10	29449249	29449250	chr10:29449250:C:T	rs6481590	C	T	T	Sox2_MA0143.3	-3	0	+	0	0	.
chr10	29449262	29449263	chr10:29449263:T:C	rs368351654	T	C	T	Sox2_MA0143.3	10	0	+	0	0	.
chr10	29449265	29449266	chr10:29449266:C:A	rs6481591	C	A	C	Sox2_MA0143.3	13	0	+	0	0	.
chr10	29523183	29523184	chr10:29523184:A:C	rs75537421	A	C	A	Sox2_MA0143.3	-11	0	+	0	0	.
chr10	29556467	29556468	chr10:29556468:T:C	rs74129716	T	C	T	Sox2_MA0143.3	-11	0	+	0	0	.
chr10	29556485	29556486	chr10:29556486:G:T	rs74129718	G	T	G	Sox2_MA0143.3	7	1	+	8.864090315184848	9.800647049772198	CCTTTGTG
chr10	29588344	29588345	chr10:29588345:G:A	rs74611473	G	A	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr10	29588368	29588369	chr10:29588369:C:T	rs142654888	C	T	C	Sox2_MA0143.3	9	0	+	0	0	.
chr10	29588385	29588386	chr10:29588386:T:G	rs972042233	T	G	T	Sox2_MA0143.3	26	0	+	0	0	.
chr10	29600295	29600296	chr10:29600296:A:C	rs2505897	A	C	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr10	29648205	29648206	chr10:29648206:C:T	rs17779017	C	T	C	Sox2_MA0143.3	24	0	+	0	0	.
chr10	29658824	29658825	chr10:29658825:G:A	rs1247456	G	A	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr10	29661228	29661229	chr10:29661229:A:G	rs117028914	A	G	A	Sox2_MA0143.3	9	0	-	0	0	.
chr10	29728975	29728976	chr10:29728976:A:G	rs12247281	A	G	A	Sox2_MA0143.3	16	0	-	0	0	.
chr10	29730823	29730824	chr10:29730824:C:G	rs12359760	C	G	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr10	29778666	29778667	chr10:29778667:G:C	rs9645508	G	C	C	Sox2_MA0143.3	12	0	-	0	0	.
chr10	29807731	29807732	chr10:29807732:G:C	chr10:29807732:G:C	G	C	G	Sox2_MA0143.3	1	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr10	29813248	29813249	chr10:29813249:T:C	rs3006540	T	C	C	Sox2_MA0143.3	21	0	+	0	0	.
chr10	29830859	29830860	chr10:29830860:C:T	rs11007767	C	T	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr10	29862301	29862302	chr10:29862302:C:G	rs7091936	C	G	C	Sox2_MA0143.3	14	0	-	0	0	.
chr10	29924603	29924604	chr10:29924604:G:T	rs138858598	G	T	G	Sox2_MA0143.3	0	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr10	29927064	29927065	chr10:29927065:G:A	rs1040153466	G	A	G	Sox2_MA0143.3	26	0	-	0	0	.
chr10	30000156	30000157	chr10:30000157:T:C	rs11595419	T	C	C	Sox2_MA0143.3	26	0	+	0	0	.
chr10	30049312	30049313	chr10:30049313:A:G	rs191399371	A	G	A	Sox2_MA0143.3	13	0	-	0	0	.
chr10	30078546	30078547	chr10:30078547:T:C	rs3847403	T	C	T	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr10	30115349	30115350	chr10:30115350:G:T	rs16931070	G	T	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr10	30131264	30131265	chr10:30131265:G:A	rs3121293	G	A	G	Sox2_MA0143.3	18	0	+	0	0	.
chr10	30141547	30141548	chr10:30141548:C:T	rs7896890	C	T	.	Sox2_MA0143.3	10	0	-	0	0	.
chr10	30304794	30304795	chr10:30304795:T:C	rs11597860	T	C	T	Sox2_MA0143.3	-10	0	-	0	0	.
chr10	30371495	30371496	chr10:30371496:T:C	rs111508104	T	C	.	Sox2_MA0143.3	-6	0	+	0	0	.
chr10	30383426	30383427	chr10:30383427:C:T	rs776416934	C	T	.	Sox2_MA0143.3	-4	0	+	0	0	.
chr10	30502748	30502749	chr10:30502749:C:T	rs75738092	C	T	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr10	30505766	30505767	chr10:30505767:G:A	rs192295558	G	A	G	Sox2_MA0143.3	15	0	-	0	0	.
chr10	30525885	30525886	chr10:30525886:G:A	rs61839715	G	A	G	Sox2_MA0143.3	5	1	+	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr10	30599205	30599206	chr10:30599206:T:C	rs12248774	T	C	C	Sox2_MA0143.3	10	0	+	0	0	.
chr10	30605012	30605013	chr10:30605013:T:C	rs300819	T	C	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr10	30605053	30605054	chr10:30605054:A:T	rs7907925	A	T	A	Sox2_MA0143.3	26	0	+	0	0	.
chr10	30714464	30714465	chr10:30714465:G:A	rs7100740	G	A	g	Sox2_MA0143.3	10	0	+	0	0	.
chr10	30721853	30721854	chr10:30721854:G:A	rs4749600	G	A	g	Sox2_MA0143.3	0	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr10	30723223	30723224	chr10:30723224:C:G	rs11599517	C	G	c	Sox2_MA0143.3	22	0	-	0	0	.
chr10	30726900	30726901	chr10:30726901:G:T	rs28458326	G	T	g	Sox2_MA0143.3	13	0	-	0	0	.
chr10	30726905	30726906	chr10:30726906:C:T	rs148399579	C	T	c	Sox2_MA0143.3	8	0	-	0	0	.
chr10	30938151	30938152	chr10:30938152:C:T	rs74859070	C	T	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr10	31036557	31036558	chr10:31036558:G:A	rs537955582	G	A	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr10	31118384	31118385	chr10:31118385:C:T	rs793097	C	T	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr10	31204207	31204208	chr10:31204208:T:G	rs936572806	T	G	T	Sox2_MA0143.3	-5	0	-	0	0	.
chr10	31584782	31584783	chr10:31584783:G:T	rs76078983	G	T	G	Sox2_MA0143.3	20	0	-	0	0	.
chr10	31646040	31646041	chr10:31646041:G:A	rs76948453	G	A	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr10	31760352	31760353	chr10:31760353:G:A	rs141737059	G	A	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr10	31765233	31765234	chr10:31765234:G:A	rs60673710	G	A	G	Sox2_MA0143.3	14	0	-	0	0	.
chr10	31774084	31774085	chr10:31774085:C:T	rs182828243	C	T	T	Sox2_MA0143.3	25	0	-	0	0	.
chr10	31774457	31774458	chr10:31774458:C:T	rs1042182892	C	T	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr10	31774461	31774462	chr10:31774462:T:C	rs7901745	T	C	t	Sox2_MA0143.3	-20	0	-	0	0	.
chr10	31978057	31978058	chr10:31978058:A:G	rs147427920	A	G	A	Sox2_MA0143.3	25	0	-	0	0	.
chr10	32125245	32125246	chr10:32125246:G:A	rs3006628	G	A	G	Sox2_MA0143.3	13	0	-	0	0	.
chr10	32149497	32149498	chr10:32149498:A:G	rs72784851	A	G	A	Sox2_MA0143.3	23	0	-	0	0	.
chr10	32149499	32149500	chr10:32149500:T:A	rs145765811	T	A	T	Sox2_MA0143.3	21	0	-	0	0	.
chr10	32346509	32346510	chr10:32346510:C:T	rs1387616875	C	T	C	Sox2_MA0143.3	13	0	+	0	0	.
chr10	32346512	32346513	chr10:32346513:G:A	rs368090898	G	A	G	Sox2_MA0143.3	16	0	+	0	0	.
chr10	32401513	32401514	chr10:32401514:C:G	rs2370768	C	G	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr10	32605961	32605962	chr10:32605962:G:A	rs116901814	G	A	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr10	32938331	32938332	chr10:32938332:G:A	rs41299216	G	A	G	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr10	32980468	32980469	chr10:32980469:A:C	rs60724454	A	C	A	Sox2_MA0143.3	-19	0	-	0	0	.
chr10	33032707	33032708	chr10:33032708:T:A	rs80293278	T	A	T	Sox2_MA0143.3	15	0	-	0	0	.
chr10	33032708	33032709	chr10:33032709:G:A	rs77626813	G	A	G	Sox2_MA0143.3	14	0	-	0	0	.
chr10	33032719	33032720	chr10:33032720:A:G	rs117109158	A	G	A	Sox2_MA0143.3	3	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr10	33042082	33042083	chr10:33042083:C:T	rs60990843	C	T	C	Sox2_MA0143.3	0	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr10	33050027	33050028	chr10:33050028:A:G	rs2756026	A	G	G	Sox2_MA0143.3	-14	0	+	0	0	.
chr10	33053399	33053400	chr10:33053400:T:C	rs11009199	T	C	C	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr10	33064914	33064915	chr10:33064915:C:A	rs2666229	C	A	A	Sox2_MA0143.3	-3	0	+	0	0	.
chr10	33086262	33086263	chr10:33086263:A:C	rs2755997	A	C	A	Sox2_MA0143.3	18	0	-	0	0	.
chr10	33131955	33131956	chr10:33131956:A:G	rs72786188	A	G	A	Sox2_MA0143.3	13	0	-	0	0	.
chr10	33138277	33138278	chr10:33138278:G:C	rs10827203	G	C	C	Sox2_MA0143.3	27	0	-	0	0	.
chr10	33138291	33138292	chr10:33138292:A:G	rs11009243	A	G	A	Sox2_MA0143.3	13	0	-	0	0	.
chr10	33197023	33197024	chr10:33197024:C:G	rs113780476	C	G	C	Sox2_MA0143.3	5	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr10	33197033	33197034	chr10:33197034:T:C	rs2474723	T	C	C	Sox2_MA0143.3	-5	0	-	0	0	.
chr10	33233976	33233977	chr10:33233977:T:C	rs113376539	T	C	T	Sox2_MA0143.3	12	0	+	0	0	.
chr10	33235437	33235438	chr10:33235438:C:T	rs75247077	C	T	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr10	33235471	33235472	chr10:33235472:A:C	rs574651191	A	C	A	Sox2_MA0143.3	24	0	+	0	0	.
chr10	33271946	33271947	chr10:33271947:C:T	rs116952037	C	T	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr10	33306614	33306615	chr10:33306615:G:T	rs79624493	G	T	G	Sox2_MA0143.3	-5	0	+	0	0	.
chr10	33340623	33340624	chr10:33340624:T:A	rs11009349	T	A	T	Sox2_MA0143.3	25	0	+	0	0	.
chr10	33413102	33413103	chr10:33413103:G:C	rs2804468	G	C	G	Sox2_MA0143.3	1	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr10	33435209	33435210	chr10:33435210:C:A	rs2785283	C	A	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr10	33519287	33519288	chr10:33519288:C:T	rs2601768	C	T	C	Sox2_MA0143.3	9	0	-	0	0	.
chr10	33550993	33550994	chr10:33550994:C:T	rs531506304	C	T	C	Sox2_MA0143.3	23	0	-	0	0	.
chr10	33554595	33554596	chr10:33554596:A:C	rs2785256	A	C	C	Sox2_MA0143.3	25	0	+	0	0	.
chr10	33659317	33659318	chr10:33659318:C:T	rs7907972	C	T	T	Sox2_MA0143.3	-1	0	-	0	0	.
chr10	33732733	33732734	chr10:33732734:T:C	rs2777523	T	C	T	Sox2_MA0143.3	23	0	+	0	0	.
chr10	33735861	33735862	chr10:33735862:T:A	rs73267245	T	A	T	Sox2_MA0143.3	21	0	-	0	0	.
chr10	33816024	33816025	chr10:33816025:A:G	rs2777532	A	G	A	Sox2_MA0143.3	-10	0	-	0	0	.
chr10	34009134	34009135	chr10:34009135:C:A	rs78039897	C	A	c	Sox2_MA0143.3	24	0	+	0	0	.
chr10	34046732	34046733	chr10:34046733:T:C	rs77423205	T	C	C	Sox2_MA0143.3	8	0	-	0	0	.
chr10	34137577	34137578	chr10:34137578:A:G	rs1571429	A	G	A	Sox2_MA0143.3	2	1	+	9.613475778572903	3.494828071296623	CCATTGTT
chr10	34157383	34157384	chr10:34157384:T:C	rs34624059	T	C	T	Sox2_MA0143.3	-4	0	+	0	0	.
chr10	34163143	34163144	chr10:34163144:C:A	rs2248375	C	A	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr10	34186008	34186009	chr10:34186009:C:T	rs35017014	C	T	C	Sox2_MA0143.3	22	0	+	0	0	.
chr10	34202921	34202922	chr10:34202922:G:A	rs10827337	G	A	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr10	34237196	34237197	chr10:34237197:A:T	rs116049971	A	T	A	Sox2_MA0143.3	-20	0	+	0	0	.
chr10	34237200	34237201	chr10:34237201:A:C	rs116285832	A	C	A	Sox2_MA0143.3	-16	0	+	0	0	.
chr10	34333710	34333711	chr10:34333711:A:G	rs1961978	A	G	G	Sox2_MA0143.3	20	0	-	0	0	.
chr10	34527313	34527314	chr10:34527314:T:G	rs558331395	T	G	T	Sox2_MA0143.3	4	1	+	3.5547341015215945	-3.3540206777936254	CCTTTGTA
chr10	34527901	34527902	chr10:34527902:A:T	rs138359925	A	T	A	Sox2_MA0143.3	-5	0	-	0	0	.
chr10	34535344	34535345	chr10:34535345:A:C	rs607870	A	C	A	Sox2_MA0143.3	15	0	-	0	0	.
chr10	34537491	34537492	chr10:34537492:A:C	rs638053	A	C	C	Sox2_MA0143.3	3	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr10	34577145	34577146	chr10:34577146:A:C	rs2025459	A	C	C	Sox2_MA0143.3	3	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr10	34609554	34609555	chr10:34609555:T:C	rs7098167	T	C	T	Sox2_MA0143.3	-19	0	+	0	0	.
chr10	34655665	34655666	chr10:34655666:T:C	rs7092015	T	C	T	Sox2_MA0143.3	-3	0	+	0	0	.
chr10	34655681	34655682	chr10:34655682:C:T	rs3002030	C	T	T	Sox2_MA0143.3	13	0	+	0	0	.
chr10	34724703	34724704	chr10:34724704:G:A	rs7091786	G	A	A	Sox2_MA0143.3	8	0	-	0	0	.
chr10	34740104	34740105	chr10:34740105:C:G	rs117193979	C	G	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr10	34771251	34771252	chr10:34771252:T:G	rs9418118	T	G	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr10	34802837	34802838	chr10:34802838:G:A	rs10827427	G	A	A	Sox2_MA0143.3	-9	0	-	0	0	.
chr10	34804655	34804656	chr10:34804656:T:C	rs7095518	T	C	T	Sox2_MA0143.3	23	0	+	0	0	.
chr10	34813458	34813459	chr10:34813459:A:G	rs11009955	A	G	A	Sox2_MA0143.3	8	0	+	0	0	.
chr10	34836012	34836013	chr10:34836013:A:T	rs10764010	A	T	T	Sox2_MA0143.3	-10	0	+	0	0	.
chr10	34881631	34881632	chr10:34881632:C:T	rs6481924	C	T	T	Sox2_MA0143.3	9	0	-	0	0	.
chr10	34994288	34994289	chr10:34994289:G:C	rs4934696	G	C	.	Sox2_MA0143.3	-20	0	+	0	0	.
chr10	35004109	35004110	chr10:35004110:G:A	rs74448083	G	A	.	Sox2_MA0143.3	-2	0	+	0	0	.
chr10	35040828	35040829	chr10:35040829:C:T	rs193232191	C	T	C	Sox2_MA0143.3	22	0	-	0	0	.
chr10	35079973	35079974	chr10:35079974:A:C	chr10:35079974:A:C	A	C	A	Sox2_MA0143.3	-16	0	-	0	0	.
chr10	35172109	35172110	chr10:35172110:T:C	rs9665538	T	C	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr10	35352642	35352643	chr10:35352643:G:A	rs2474519	G	A	A	Sox2_MA0143.3	-6	0	-	0	0	.
chr10	35417102	35417103	chr10:35417103:C:G	rs539959058	C	G	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr10	35564416	35564417	chr10:35564417:G:A	rs540777225	G	A	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr10	35676197	35676198	chr10:35676198:A:T	rs4145912	A	T	A	Sox2_MA0143.3	-3	0	+	0	0	.
chr10	35882805	35882806	chr10:35882806:T:C	rs601807	T	C	C	Sox2_MA0143.3	8	0	-	0	0	.
chr10	36023924	36023925	chr10:36023925:C:T	rs74976634	C	T	C	Sox2_MA0143.3	1	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr10	36383624	36383625	chr10:36383625:T:G	rs7911616	T	G	T	Sox2_MA0143.3	-15	0	+	0	0	.
chr10	36555270	36555271	chr10:36555271:G:A	rs74136805	G	A	G	Sox2_MA0143.3	8	0	-	0	0	.
chr10	36638762	36638763	chr10:36638763:G:A	rs3006968	G	A	G	Sox2_MA0143.3	22	0	+	0	0	.
chr10	36887220	36887221	chr10:36887221:A:C	rs1192671	A	C	c	Sox2_MA0143.3	23	0	-	0	0	.
chr10	36889469	36889470	chr10:36889470:C:T	rs77761486	C	T	c	Sox2_MA0143.3	11	0	-	0	0	.
chr10	36944231	36944232	chr10:36944232:G:T	rs1857310	G	T	g	Sox2_MA0143.3	-16	0	+	0	0	.
chr10	36944238	36944239	chr10:36944239:G:A	rs191403477	G	A	g	Sox2_MA0143.3	-9	0	+	0	0	.
chr10	37057267	37057268	chr10:37057268:G:T	rs1711255	G	T	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr10	37704909	37704910	chr10:37704910:G:A	rs1830613	G	A	.	Sox2_MA0143.3	16	0	-	0	0	.
chr10	37704931	37704932	chr10:37704932:T:C	rs12357418	T	C	.	Sox2_MA0143.3	-6	0	-	0	0	.
chr10	37706030	37706031	chr10:37706031:T:C	rs77174182	T	C	.	Sox2_MA0143.3	24	0	-	0	0	.
chr10	38354687	38354688	chr10:38354688:G:A	rs2800552	G	A	.	Sox2_MA0143.3	24	0	-	0	0	.
chr10	38356495	38356496	chr10:38356496:C:T	rs2754494	C	T	.	Sox2_MA0143.3	-2	0	+	0	0	.
chr10	38450965	38450966	chr10:38450966:C:G	rs143214933	C	G	.	Sox2_MA0143.3	5	1	-	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr10	39455966	39455967	chr10:39455967:C:T	rs1248482900	C	T	.	Sox2_MA0143.3	21	0	-	0	0	.
chr10	39455989	39455990	chr10:39455990:C:T	rs36131634	C	T	.	Sox2_MA0143.3	-2	0	-	0	0	.
chr10	39455994	39455995	chr10:39455995:G:A	rs1357553396	G	A	.	Sox2_MA0143.3	-7	0	-	0	0	.
chr10	40371391	40371392	chr10:40371392:G:T	rs1218332579	G	T	.	Sox2_MA0143.3	-1	0	+	0	0	.
chr10	40371431	40371432	chr10:40371432:G:A	rs1374495485	G	A	.	Sox2_MA0143.3	-18	0	+	0	0	.
chr10	42392723	42392724	chr10:42392724:A:G	rs2489697	A	G	N	Sox2_MA0143.3	-17	0	+	0	0	.
chr10	42640750	42640751	chr10:42640751:C:T	rs158383	C	T	C	Sox2_MA0143.3	22	0	-	0	0	.
chr10	42928059	42928060	chr10:42928060:C:A	rs12571598	C	A	C	Sox2_MA0143.3	19	0	+	0	0	.
chr10	42930897	42930898	chr10:42930898:G:A	rs788277	G	A	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr10	42939972	42939973	chr10:42939973:G:A	rs2506027	G	A	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr10	42979245	42979246	chr10:42979246:A:C	rs10900291	A	C	C	Sox2_MA0143.3	25	0	+	0	0	.
chr10	42980270	42980271	chr10:42980271:C:T	rs41295813	C	T	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr10	42980301	42980302	chr10:42980302:G:T	rs141393534	G	T	G	Sox2_MA0143.3	20	0	+	0	0	.
chr10	43000328	43000329	chr10:43000329:A:C	rs73262124	A	C	A	Sox2_MA0143.3	13	0	+	0	0	.
chr10	43253072	43253073	chr10:43253073:C:T	rs75710648	C	T	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr10	43254811	43254812	chr10:43254812:C:T	rs2503853	C	T	C	Sox2_MA0143.3	24	0	-	0	0	.
chr10	43316058	43316059	chr10:43316059:C:A	rs72785230	C	A	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr10	43418301	43418302	chr10:43418302:C:T	rs113032738	C	T	C	Sox2_MA0143.3	11	0	-	0	0	.
chr10	43436809	43436810	chr10:43436810:C:T	rs367828552	C	T	C	Sox2_MA0143.3	27	0	-	0	0	.
chr10	43436833	43436834	chr10:43436834:A:G	rs74506427	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr10	43444498	43444499	chr10:43444499:C:A	rs58723653	C	A	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr10	43595755	43595756	chr10:43595756:T:C	rs117639002	T	C	T	Sox2_MA0143.3	4	1	+	8.864090315184848	1.9553355358696274	CCTTTGTG
chr10	43628025	43628026	chr10:43628026:T:C	rs4415708	T	C	T	Sox2_MA0143.3	11	0	+	0	0	.
chr10	43671856	43671857	chr10:43671857:G:A	rs372492065	G	A	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr10	43781820	43781821	chr10:43781821:T:C	rs78873074	T	C	T	Sox2_MA0143.3	-14	0	-	0	0	.
chr10	43793209	43793210	chr10:43793210:T:G	rs10793497	T	G	.	Sox2_MA0143.3	4	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr10	43799365	43799366	chr10:43799366:G:A	rs6593368	G	A	A	Sox2_MA0143.3	-1	0	-	0	0	.
chr10	43812158	43812159	chr10:43812159:A:G	rs7906426	A	G	A	Sox2_MA0143.3	8	0	+	0	0	.
chr10	43816780	43816781	chr10:43816781:A:T	rs61071701	A	T	A	Sox2_MA0143.3	2	1	+	8.676919043985553	8.864090315184848	CCATTGTG
chr10	43816852	43816853	chr10:43816853:C:T	rs17154467	C	T	C	Sox2_MA0143.3	13	0	+	0	0	.
chr10	43816861	43816862	chr10:43816862:C:T	rs138689576	C	T	T	Sox2_MA0143.3	22	0	+	0	0	.
chr10	43820131	43820132	chr10:43820132:G:A	rs11238723	G	A	A	Sox2_MA0143.3	5	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr10	43825364	43825365	chr10:43825365:C:T	rs2863236	C	T	C	Sox2_MA0143.3	1	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr10	43825368	43825369	chr10:43825369:G:T	rs2863235	G	T	G	Sox2_MA0143.3	5	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr10	43869570	43869571	chr10:43869571:T:G	rs2031513	T	G	T	Sox2_MA0143.3	22	0	+	0	0	.
chr10	43922571	43922572	chr10:43922572:C:T	rs10899950	C	T	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr10	43922575	43922576	chr10:43922576:A:C	rs1254851	A	C	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr10	43938983	43938984	chr10:43938984:C:T	rs1254848	C	T	T	Sox2_MA0143.3	-12	0	-	0	0	.
chr10	43964156	43964157	chr10:43964157:C:T	rs66887775	C	T	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr10	43964537	43964538	chr10:43964538:T:G	rs74138966	T	G	T	Sox2_MA0143.3	-12	0	+	0	0	.
chr10	44030489	44030490	chr10:44030490:C:G	rs10899974	C	G	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr10	44031860	44031861	chr10:44031861:A:C	rs72782973	A	C	A	Sox2_MA0143.3	22	0	-	0	0	.
chr10	44031879	44031880	chr10:44031880:A:G	rs1492710	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr10	44126565	44126566	chr10:44126566:A:G	rs17155274	A	G	G	Sox2_MA0143.3	4	1	-	8.676919043985553	1.7681642646703322	CCATTGTG
chr10	44178379	44178380	chr10:44178380:G:C	rs7099567	G	C	G	Sox2_MA0143.3	0	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr10	44210004	44210005	chr10:44210005:G:T	rs12570720	G	T	G	Sox2_MA0143.3	18	0	-	0	0	.
chr10	44245807	44245808	chr10:44245808:G:A	rs494207	G	A	g	Sox2_MA0143.3	-7	0	+	0	0	.
chr10	44336077	44336078	chr10:44336078:C:T	rs1147887	C	T	C	Sox2_MA0143.3	12	0	-	0	0	.
chr10	44355927	44355928	chr10:44355928:A:G	rs920174	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr10	44357068	44357069	chr10:44357069:C:A	rs17156170	C	A	C	Sox2_MA0143.3	5	1	-	9.019595766176417	2.110840986861197	CCATTGTC
chr10	44419491	44419492	chr10:44419492:A:G	rs12770922	A	G	A	Sox2_MA0143.3	18	0	-	0	0	.
chr10	44463732	44463733	chr10:44463733:A:G	rs4948628	A	G	A	Sox2_MA0143.3	24	0	+	0	0	.
chr10	44477399	44477400	chr10:44477400:A:G	rs1147963	A	G	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr10	44515914	44515915	chr10:44515915:T:C	rs17407080	T	C	C	Sox2_MA0143.3	21	0	-	0	0	.
chr10	44648269	44648270	chr10:44648270:C:T	rs1293629280	C	T	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr10	44666402	44666403	chr10:44666403:A:T	rs78936487	A	T	A	Sox2_MA0143.3	-3	0	-	0	0	.
chr10	44673360	44673361	chr10:44673361:T:C	rs77264703	T	C	T	Sox2_MA0143.3	23	0	-	0	0	.
chr10	44674806	44674807	chr10:44674807:A:G	rs17410452	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr10	44801665	44801666	chr10:44801666:A:G	rs1886597	A	G	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr10	44823072	44823073	chr10:44823073:G:A	rs11239251	G	A	G	Sox2_MA0143.3	14	0	-	0	0	.
chr10	44823076	44823077	chr10:44823077:T:A	rs55873382	T	A	T	Sox2_MA0143.3	10	0	-	0	0	.
chr10	44847348	44847349	chr10:44847349:T:C	rs61267097	T	C	C	Sox2_MA0143.3	10	0	-	0	0	.
chr10	44856184	44856185	chr10:44856185:T:C	rs55855984	T	C	T	Sox2_MA0143.3	-17	0	-	0	0	.
chr10	44856423	44856424	chr10:44856424:G:A	rs7100768	G	A	A	Sox2_MA0143.3	10	0	+	0	0	.
chr10	44874925	44874926	chr10:44874926:G:C	rs61852544	G	C	G	Sox2_MA0143.3	24	0	-	0	0	.
chr10	44914981	44914982	chr10:44914982:A:G	rs4948928	A	G	G	Sox2_MA0143.3	10	0	+	0	0	.
chr10	44932099	44932100	chr10:44932100:G:T	rs12414447	G	T	G	Sox2_MA0143.3	5	1	+	9.019595766176417	2.110840986861197	CCATTGTC
chr10	44949112	44949113	chr10:44949113:T:C	rs17515726	T	C	T	Sox2_MA0143.3	-18	0	-	0	0	.
chr10	44958289	44958290	chr10:44958290:G:A	rs115237782	G	A	G	Sox2_MA0143.3	-3	0	-	0	0	.
chr10	44959491	44959492	chr10:44959492:C:G	rs571552022	C	G	C	Sox2_MA0143.3	21	0	-	0	0	.
chr10	44980331	44980332	chr10:44980332:T:C	rs71494755	T	C	T	Sox2_MA0143.3	27	0	+	0	0	.
chr10	44996683	44996684	chr10:44996684:G:C	rs11239306	G	C	G	Sox2_MA0143.3	25	0	+	0	0	.
chr10	45062343	45062344	chr10:45062344:C:T	rs2185312	C	T	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr10	45279276	45279277	chr10:45279277:G:A	rs1836467	G	A	N	Sox2_MA0143.3	-5	0	+	0	0	.
chr10	45292276	45292277	chr10:45292277:T:C	rs11239417	T	C	C	Sox2_MA0143.3	12	0	+	0	0	.
chr10	45302753	45302754	chr10:45302754:C:T	rs7098434	C	T	T	Sox2_MA0143.3	-19	0	-	0	0	.
chr10	45334316	45334317	chr10:45334317:A:G	rs2099173	A	G	N	Sox2_MA0143.3	-7	0	+	0	0	.
chr10	45346645	45346646	chr10:45346646:T:C	rs111646485	T	C	-	Sox2_MA0143.3	8	0	+	0	0	.
chr10	45369630	45369631	chr10:45369631:T:C	rs7084793	T	C	C	Sox2_MA0143.3	2	1	+	9.800647049772198	3.494828071296623	CCTTTGTT
chr10	45375983	45375984	chr10:45375984:G:A	rs56150414	G	A	A	Sox2_MA0143.3	-9	0	+	0	0	.
chr10	45380531	45380532	chr10:45380532:C:T	rs3824613	C	T	C	Sox2_MA0143.3	17	0	-	0	0	.
chr10	45382450	45382451	chr10:45382451:C:T	rs28395865	C	T	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr10	45426533	45426534	chr10:45426534:A:G	rs3780906	A	G	A	Sox2_MA0143.3	15	0	+	0	0	.
chr10	45471035	45471036	chr10:45471036:A:G	chr10:45471036:A:G	A	G	A	Sox2_MA0143.3	14	0	-	0	0	.
chr10	45482882	45482883	chr10:45482883:C:T	rs71494791	C	T	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr10	45519540	45519541	chr10:45519541:T:C	rs75235500	T	C	T	Sox2_MA0143.3	3	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr10	45549998	45549999	chr10:45549999:G:A	rs75053968	G	A	G	Sox2_MA0143.3	-3	0	-	0	0	.
chr10	45557468	45557469	chr10:45557469:T:C	rs17768548	T	C	T	Sox2_MA0143.3	10	0	+	0	0	.
chr10	45590968	45590969	chr10:45590969:G:T	rs11239570	G	T	G	Sox2_MA0143.3	18	0	+	0	0	.
chr10	45710875	45710876	chr10:45710876:C:T	rs114410128	C	T	.	Sox2_MA0143.3	-10	0	+	0	0	.
chr10	45761846	45761847	chr10:45761847:G:T	rs137878530	G	T	.	Sox2_MA0143.3	14	0	+	0	0	.
chr10	45761859	45761860	chr10:45761860:G:A	rs72798242	G	A	.	Sox2_MA0143.3	27	0	+	0	0	.
chr10	46023501	46023502	chr10:46023502:G:C	rs190192819	G	C	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr10	46023525	46023526	chr10:46023526:G:A	rs138011461	G	A	G	Sox2_MA0143.3	5	1	+	9.613475778572903	2.7047209992576837	CCATTGTT
chr10	46023535	46023536	chr10:46023536:T:C	chr10:46023536:T:C	T	C	T	Sox2_MA0143.3	15	0	+	0	0	.
chr10	46036352	46036353	chr10:46036353:G:A	rs7904463	G	A	A	Sox2_MA0143.3	-2	0	-	0	0	.
chr10	46095473	46095474	chr10:46095474:G:C	chr10:46095474:G:C	G	C	g	Sox2_MA0143.3	-16	0	-	0	0	.
chr10	46250681	46250682	chr10:46250682:A:G	rs2999442	A	G	.	Sox2_MA0143.3	9	0	-	0	0	.
chr10	46250705	46250706	chr10:46250706:A:G	rs5019325	A	G	.	Sox2_MA0143.3	-15	0	-	0	0	.
chr10	46251798	46251799	chr10:46251799:A:G	rs2999439	A	G	.	Sox2_MA0143.3	3	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr10	46254264	46254265	chr10:46254265:G:T	rs111809958	G	T	.	Sox2_MA0143.3	-11	0	+	0	0	.
chr10	46275416	46275417	chr10:46275417:A:G	rs7894140	A	G	.	Sox2_MA0143.3	-13	0	+	0	0	.
chr10	46275425	46275426	chr10:46275426:T:C	rs4451651	T	C	.	Sox2_MA0143.3	-4	0	+	0	0	.
chr10	46307228	46307229	chr10:46307229:G:A	rs148440043	G	A	.	Sox2_MA0143.3	0	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr10	46313528	46313529	chr10:46313529:T:C	rs17769532	T	C	.	Sox2_MA0143.3	27	0	+	0	0	.
chr10	46330038	46330039	chr10:46330039:G:A	rs10906952	G	A	.	Sox2_MA0143.3	-10	0	+	0	0	.
chr10	46330065	46330066	chr10:46330066:C:G	rs7091749	C	G	.	Sox2_MA0143.3	17	0	+	0	0	.
chr10	46458129	46458130	chr10:46458130:A:T	rs4631822	A	T	a	Sox2_MA0143.3	13	0	-	0	0	.
chr10	46521772	46521773	chr10:46521773:A:G	rs72780301	A	G	a	Sox2_MA0143.3	4	1	-	9.800647049772198	2.8918922704569785	CCTTTGTT
chr10	46527822	46527823	chr10:46527823:C:T	rs143876006	C	T	C	Sox2_MA0143.3	7	1	-	8.864090315184848	3.5547341015215945	CCTTTGTG
chr10	46536983	46536984	chr10:46536984:G:A	rs909783267	G	A	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr10	46547410	46547411	chr10:46547411:C:G	rs551864111	C	G	C	Sox2_MA0143.3	7	1	-	8.676919043985553	9.019595766176417	CCATTGTG
chr10	46547780	46547781	chr10:46547781:C:T	rs959553355	C	T	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr10	46596194	46596195	chr10:46596195:G:A	rs28470456	G	A	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr10	47175232	47175233	chr10:47175233:C:T	rs115633512	C	T	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr10	47179972	47179973	chr10:47179973:C:G	rs10888203	C	G	G	Sox2_MA0143.3	1	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr10	47188567	47188568	chr10:47188568:A:G	rs10788711	A	G	A	Sox2_MA0143.3	-5	0	+	0	0	.
chr10	47206882	47206883	chr10:47206883:T:C	rs552607294	T	C	T	Sox2_MA0143.3	-4	0	-	0	0	.
chr10	47241893	47241894	chr10:47241894:T:G	rs9325891	T	G	G	Sox2_MA0143.3	7	1	+	9.613475778572903	8.676919043985553	CCATTGTT
chr10	47306733	47306734	chr10:47306734:G:A	rs11592608	G	A	G	Sox2_MA0143.3	21	0	+	0	0	.
chr10	47307932	47307933	chr10:47307933:C:G	rs2607873	C	G	C	Sox2_MA0143.3	25	0	+	0	0	.
chr10	47413079	47413080	chr10:47413080:T:C	rs7899683	T	C	T	Sox2_MA0143.3	-12	0	+	0	0	.
chr10	47413088	47413089	chr10:47413089:T:C	rs12265468	T	C	T	Sox2_MA0143.3	-3	0	+	0	0	.
chr10	47914958	47914959	chr10:47914959:C:T	rs4511230	C	T	.	Sox2_MA0143.3	18	0	+	0	0	.
chr10	48152790	48152791	chr10:48152791:T:G	rs564164706	T	G	T	Sox2_MA0143.3	19	0	+	0	0	.
chr10	48287842	48287843	chr10:48287843:T:C	rs4838404	T	C	T	Sox2_MA0143.3	-12	0	-	0	0	.
chr10	48452252	48452253	chr10:48452253:C:A	rs10857570	C	A	A	Sox2_MA0143.3	-3	0	-	0	0	.
chr10	48470354	48470355	chr10:48470355:C:T	rs17010496	C	T	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr10	48470355	48470356	chr10:48470356:G:C	chr10:48470356:G:C	G	C	T	Sox2_MA0143.3	-3	0	+	0	0	.
chr10	48476954	48476955	chr10:48476955:T:C	rs10857579	T	C	T	Sox2_MA0143.3	-19	0	+	0	0	.
chr10	48494339	48494340	chr10:48494340:C:T	rs7913593	C	T	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr10	48498595	48498596	chr10:48498596:G:A	rs7898936	G	A	g	Sox2_MA0143.3	22	0	+	0	0	.
chr10	48511173	48511174	chr10:48511174:C:T	rs7910353	C	T	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr10	48520491	48520492	chr10:48520492:C:A	rs60128644	C	A	C	Sox2_MA0143.3	27	0	-	0	0	.
chr10	48527052	48527053	chr10:48527053:A:G	rs11101371	A	G	A	Sox2_MA0143.3	-18	0	-	0	0	.
chr10	48553357	48553358	chr10:48553358:T:C	rs749377	T	C	T	Sox2_MA0143.3	11	0	-	0	0	.
chr10	48656780	48656781	chr10:48656781:C:T	rs74134011	C	T	C	Sox2_MA0143.3	7	1	-	8.864090315184848	3.5547341015215945	CCTTTGTG
chr10	48702553	48702554	chr10:48702554:T:C	rs116999148	T	C	T	Sox2_MA0143.3	-15	0	+	0	0	.
chr10	48736874	48736875	chr10:48736875:C:G	rs7089017	C	G	G	Sox2_MA0143.3	12	0	-	0	0	.
chr10	48779751	48779752	chr10:48779752:G:A	rs10857637	G	A	G	Sox2_MA0143.3	9	0	-	0	0	.
chr10	48819288	48819289	chr10:48819289:A:G	rs17699445	A	G	A	Sox2_MA0143.3	10	0	+	0	0	.
chr10	48830754	48830755	chr10:48830755:A:G	rs3747874	A	G	G	Sox2_MA0143.3	3	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr10	48927333	48927334	chr10:48927334:C:T	rs188073446	C	T	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr10	48937572	48937573	chr10:48937573:C:T	rs112690336	C	T	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr10	49035493	49035494	chr10:49035494:C:T	rs1125517	C	T	C	Sox2_MA0143.3	10	0	+	0	0	.
chr10	49090475	49090476	chr10:49090476:A:G	rs7074818	A	G	G	Sox2_MA0143.3	3	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr10	49090493	49090494	chr10:49090494:G:A	rs12774117	G	A	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr10	49124794	49124795	chr10:49124795:T:C	rs72785068	T	C	T	Sox2_MA0143.3	-18	0	+	0	0	.
chr10	49130317	49130318	chr10:49130318:T:C	rs7100655	T	C	T	Sox2_MA0143.3	14	0	+	0	0	.
chr10	49138395	49138396	chr10:49138396:T:C	rs4838455	T	C	C	Sox2_MA0143.3	23	0	-	0	0	.
chr10	49150148	49150149	chr10:49150149:C:G	rs147511898	C	G	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr10	49169723	49169724	chr10:49169724:G:A	rs2466748	G	A	A	Sox2_MA0143.3	24	0	+	0	0	.
chr10	49184349	49184350	chr10:49184350:A:T	rs11101006	A	T	T	Sox2_MA0143.3	-2	0	-	0	0	.
chr10	49330427	49330428	chr10:49330428:A:G	rs7917742	A	G	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr10	49349527	49349528	chr10:49349528:G:A	rs10745260	G	A	G	Sox2_MA0143.3	20	0	-	0	0	.
chr10	49376895	49376896	chr10:49376896:G:T	rs115686482	G	T	G	Sox2_MA0143.3	17	0	+	0	0	.
chr10	49431670	49431671	chr10:49431671:T:C	rs11812473	T	C	T	Sox2_MA0143.3	20	0	-	0	0	.
chr10	49519242	49519243	chr10:49519243:G:C	rs4253063	G	C	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr10	49533204	49533205	chr10:49533205:A:C	rs1964145	A	C	A	Sox2_MA0143.3	7	1	-	9.800647049772198	8.864090315184848	CCTTTGTT
chr10	49539724	49539725	chr10:49539725:G:T	rs113663657	G	T	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr10	49553517	49553518	chr10:49553518:C:T	rs11101155	C	T	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr10	49600906	49600907	chr10:49600907:G:A	rs577484184	G	A	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr10	49608896	49608897	chr10:49608897:C:T	rs733722	C	T	C	Sox2_MA0143.3	7	1	-	8.676919043985553	3.3675628303222993	CCATTGTG
chr10	49616197	49616198	chr10:49616198:C:A	rs11101182	C	A	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr10	49758128	49758129	chr10:49758129:T:G	rs77983025	T	G	G	Sox2_MA0143.3	13	0	-	0	0	.
chr10	50052192	50052193	chr10:50052193:A:C	rs150196137	A	C	.	Sox2_MA0143.3	14	0	-	0	0	.
chr10	50147619	50147620	chr10:50147620:G:A	rs866410028	G	A	.	Sox2_MA0143.3	1	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr10	50343946	50343947	chr10:50343947:A:G	rs10763354	A	G	G	Sox2_MA0143.3	2	1	+	9.019595766176417	2.900948058900136	CCATTGTC
chr10	50470082	50470083	chr10:50470083:T:C	rs7895767	T	C	T	Sox2_MA0143.3	26	0	+	0	0	.
chr10	50517847	50517848	chr10:50517848:G:A	rs34928652	G	A	G	Sox2_MA0143.3	13	0	-	0	0	.
chr10	50519719	50519720	chr10:50519720:C:T	rs41427847	C	T	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr10	50538373	50538374	chr10:50538374:C:T	rs11006075	C	T	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr10	50539234	50539235	chr10:50539235:T:C	rs1010930	T	C	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr10	50576895	50576896	chr10:50576896:A:T	rs7921226	A	T	A	Sox2_MA0143.3	-19	0	-	0	0	.
chr10	50617411	50617412	chr10:50617412:G:A	rs7080895	G	A	G	Sox2_MA0143.3	10	0	-	0	0	.
chr10	50626118	50626119	chr10:50626119:C:T	rs138286100	C	T	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr10	50679171	50679172	chr10:50679172:A:G	rs60267326	A	G	.	Sox2_MA0143.3	14	0	+	0	0	.
chr10	50852340	50852341	chr10:50852341:G:A	rs10994720	G	A	G	Sox2_MA0143.3	26	0	-	0	0	.
chr10	50882790	50882791	chr10:50882791:G:T	rs965602316	G	T	G	Sox2_MA0143.3	-11	0	+	0	0	.
chr10	50891371	50891372	chr10:50891372:A:G	rs565657552	A	G	A	Sox2_MA0143.3	15	0	-	0	0	.
chr10	51043832	51043833	chr10:51043833:G:A	rs11814118	G	A	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr10	51139504	51139505	chr10:51139505:T:C	rs10822288	T	C	T	Sox2_MA0143.3	13	0	+	0	0	.
chr10	51199538	51199539	chr10:51199539:G:A	rs77832516	G	A	A	Sox2_MA0143.3	21	0	-	0	0	.
chr10	51319435	51319436	chr10:51319436:A:G	rs7907496	A	G	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr10	51347995	51347996	chr10:51347996:G:C	rs1201431	G	C	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr10	51492554	51492555	chr10:51492555:T:C	rs7921499	T	C	T	Sox2_MA0143.3	11	0	+	0	0	.
chr10	51591017	51591018	chr10:51591018:A:G	rs7908596	A	G	A	Sox2_MA0143.3	23	0	-	0	0	.
chr10	51642720	51642721	chr10:51642721:C:A	rs7911086	C	A	C	Sox2_MA0143.3	22	0	-	0	0	.
chr10	51658259	51658260	chr10:51658260:C:T	rs80068640	C	T	C	Sox2_MA0143.3	20	0	-	0	0	.
chr10	51690098	51690099	chr10:51690099:G:A	rs72797357	G	A	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr10	51718952	51718953	chr10:51718953:A:C	rs4400745	A	C	C	Sox2_MA0143.3	14	0	-	0	0	.
chr10	51771264	51771265	chr10:51771265:C:T	rs11819300	C	T	T	Sox2_MA0143.3	-4	0	+	0	0	.
chr10	51893418	51893419	chr10:51893419:C:T	rs7074579	C	T	C	Sox2_MA0143.3	19	0	-	0	0	.
chr10	51897986	51897987	chr10:51897987:C:A	rs528975686	C	A	C	Sox2_MA0143.3	9	0	+	0	0	.
chr10	51964863	51964864	chr10:51964864:A:G	rs7085893	A	G	A	Sox2_MA0143.3	-13	0	+	0	0	.
chr10	52215887	52215888	chr10:52215888:G:C	rs16927970	G	C	C	Sox2_MA0143.3	16	0	-	0	0	.
chr10	52216008	52216009	chr10:52216009:A:G	rs1406476	A	G	G	Sox2_MA0143.3	6	1	-	9.019595766176417	2.110840986861197	CCATTGTC
chr10	52437130	52437131	chr10:52437131:T:C	rs1194715	T	C	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr10	52454297	52454298	chr10:52454298:G:C	chr10:52454298:G:C	G	C	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr10	52518775	52518776	chr10:52518776:A:G	rs1733722	A	G	A	Sox2_MA0143.3	17	0	-	0	0	.
chr10	52518798	52518799	chr10:52518799:C:G	rs1730472	C	G	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr10	52729919	52729920	chr10:52729920:C:T	rs1992526	C	T	C	Sox2_MA0143.3	1	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr10	52785544	52785545	chr10:52785545:G:A	rs10824803	G	A	g	Sox2_MA0143.3	-5	0	-	0	0	.
chr10	52814539	52814540	chr10:52814540:A:C	rs35300563	A	C	A	Sox2_MA0143.3	-11	0	-	0	0	.
chr10	52875363	52875364	chr10:52875364:A:G	rs7920685	A	G	G	Sox2_MA0143.3	23	0	+	0	0	.
chr10	52882148	52882149	chr10:52882149:A:G	rs77086172	A	G	A	Sox2_MA0143.3	25	0	-	0	0	.
chr10	52968223	52968224	chr10:52968224:G:A	rs61844503	G	A	A	Sox2_MA0143.3	-11	0	+	0	0	.
chr10	53030186	53030187	chr10:53030187:C:T	rs2264661	C	T	C	Sox2_MA0143.3	14	0	-	0	0	.
chr10	53090227	53090228	chr10:53090228:A:G	rs7915500	A	G	A	Sox2_MA0143.3	25	0	-	0	0	.
chr10	53138371	53138372	chr10:53138372:A:C	rs12571782	A	C	A	Sox2_MA0143.3	-9	0	+	0	0	.
chr10	53404050	53404051	chr10:53404051:G:A	rs1948669	G	A	A	Sox2_MA0143.3	27	0	-	0	0	.
chr10	53439712	53439713	chr10:53439713:T:C	rs10825023	T	C	C	Sox2_MA0143.3	6	1	+	8.676919043985553	1.7681642646703326	CCATTGTG
chr10	53440727	53440728	chr10:53440728:G:T	rs1487469	G	T	G	Sox2_MA0143.3	5	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr10	53490464	53490465	chr10:53490465:G:A	rs7924289	G	A	A	Sox2_MA0143.3	24	0	-	0	0	.
chr10	53995730	53995731	chr10:53995731:C:T	rs2135720	C	T	C	Sox2_MA0143.3	12	0	+	0	0	.
chr10	54315590	54315591	chr10:54315591:A:G	rs10825302	A	G	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr10	54315601	54315602	chr10:54315602:C:T	rs117772551	C	T	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr10	54315620	54315621	chr10:54315621:A:G	rs10763097	A	G	G	Sox2_MA0143.3	14	0	+	0	0	.
chr10	55080929	55080930	chr10:55080930:A:G	rs1573227	A	G	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr10	55979450	55979451	chr10:55979451:A:C	rs4584499	A	C	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr10	56077670	56077671	chr10:56077671:G:A	rs9416449	G	A	G	Sox2_MA0143.3	9	0	-	0	0	.
chr10	56296763	56296764	chr10:56296764:A:G	rs16908640	A	G	A	Sox2_MA0143.3	-6	0	+	0	0	.
chr10	56296791	56296792	chr10:56296792:G:C	rs16908642	G	C	G	Sox2_MA0143.3	22	0	+	0	0	.
chr10	56317753	56317754	chr10:56317754:C:T	rs73280169	C	T	C	Sox2_MA0143.3	19	0	+	0	0	.
chr10	56359143	56359144	chr10:56359144:C:G	rs2393069	C	G	G	Sox2_MA0143.3	18	0	-	0	0	.
chr10	56361375	56361376	chr10:56361376:C:T	rs16908827	C	T	C	Sox2_MA0143.3	20	0	+	0	0	.
chr10	56361380	56361381	chr10:56361381:G:A	rs190246866	G	A	G	Sox2_MA0143.3	25	0	+	0	0	.
chr10	56634573	56634574	chr10:56634574:A:G	rs10825827	A	G	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr10	56717245	56717246	chr10:56717246:A:T	rs6481230	A	T	A	Sox2_MA0143.3	-9	0	-	0	0	.
chr10	56791703	56791704	chr10:56791704:T:C	rs7073569	T	C	T	Sox2_MA0143.3	-5	0	-	0	0	.
chr10	56862251	56862252	chr10:56862252:A:G	rs12355683	A	G	a	Sox2_MA0143.3	-16	0	+	0	0	.
chr10	56862828	56862829	chr10:56862829:C:T	rs78991903	C	T	c	Sox2_MA0143.3	-5	0	+	0	0	.
chr10	57218402	57218403	chr10:57218403:C:A	rs150377855	C	A	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr10	57535372	57535373	chr10:57535373:G:A	rs7081853	G	A	A	Sox2_MA0143.3	1	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr10	57535392	57535393	chr10:57535393:T:C	rs7070194	T	C	T	Sox2_MA0143.3	-19	0	-	0	0	.
chr10	57557969	57557970	chr10:57557970:C:A	rs10826086	C	A	C	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr10	57743903	57743904	chr10:57743904:A:G	rs74888351	A	G	g	Sox2_MA0143.3	16	0	+	0	0	.
chr10	57816283	57816284	chr10:57816284:C:T	rs7358056	C	T	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr10	57983128	57983129	chr10:57983129:G:A	rs148630182	G	A	G	Sox2_MA0143.3	20	0	+	0	0	.
chr10	58029417	58029418	chr10:58029418:C:T	rs11819380	C	T	T	Sox2_MA0143.3	-16	0	+	0	0	.
chr10	58138612	58138613	chr10:58138613:G:A	rs11006064	G	A	G	Sox2_MA0143.3	15	0	-	0	0	.
chr10	58241019	58241020	chr10:58241020:A:G	rs2590323	A	G	G	Sox2_MA0143.3	-9	0	+	0	0	.
chr10	58254884	58254885	chr10:58254885:G:A	rs2590349	G	A	G	Sox2_MA0143.3	-9	0	+	0	0	.
chr10	58435955	58435956	chr10:58435956:G:T	rs1427219	G	T	T	Sox2_MA0143.3	21	0	+	0	0	.
chr10	58447455	58447456	chr10:58447456:T:C	rs150718843	T	C	T	Sox2_MA0143.3	2	1	+	8.864090315184848	2.5582713367092715	CCTTTGTG
chr10	58476155	58476156	chr10:58476156:A:G	rs143689969	A	G	A	Sox2_MA0143.3	7	1	+	3.5547341015215945	8.864090315184848	CCTTTGTA
chr10	58714643	58714644	chr10:58714644:A:G	rs76112134	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr10	58726877	58726878	chr10:58726878:G:C	rs117783767	G	C	G	Sox2_MA0143.3	-16	0	-	0	0	.
chr10	58796990	58796991	chr10:58796991:G:A	rs2893790	G	A	A	Sox2_MA0143.3	14	0	-	0	0	.
chr10	58839953	58839954	chr10:58839954:A:G	rs79617271	A	G	A	Sox2_MA0143.3	-15	0	-	0	0	.
chr10	58951664	58951665	chr10:58951665:A:G	rs10826256	A	G	G	Sox2_MA0143.3	9	0	-	0	0	.
chr10	59073544	59073545	chr10:59073545:T:C	rs80302597	T	C	T	Sox2_MA0143.3	-7	0	-	0	0	.
chr10	59127228	59127229	chr10:59127229:G:T	chr10:59127229:G:T	G	T	G	Sox2_MA0143.3	5	1	+	9.019595766176417	2.110840986861197	CCATTGTC
chr10	59240841	59240842	chr10:59240842:G:A	rs11006410	G	A	G	Sox2_MA0143.3	13	0	+	0	0	.
chr10	59325568	59325569	chr10:59325569:C:T	rs484974	C	T	T	Sox2_MA0143.3	15	0	-	0	0	.
chr10	59580134	59580135	chr10:59580135:T:C	rs61860854	T	C	T	Sox2_MA0143.3	12	0	+	0	0	.
chr10	59580138	59580139	chr10:59580139:G:A	rs10826320	G	A	G	Sox2_MA0143.3	16	0	+	0	0	.
chr10	59710322	59710323	chr10:59710323:G:T	rs578114447	G	T	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr10	59744231	59744232	chr10:59744232:G:A	rs61861084	G	A	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr10	59794247	59794248	chr10:59794248:A:C	rs2271564	A	C	A	Sox2_MA0143.3	-4	0	-	0	0	.
chr10	59838244	59838245	chr10:59838245:C:T	rs3862859	C	T	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr10	59971190	59971191	chr10:59971191:T:A	rs74155206	T	A	A	Sox2_MA0143.3	18	0	-	0	0	.
chr10	59977668	59977669	chr10:59977669:G:T	rs10761423	G	T	T	Sox2_MA0143.3	24	0	+	0	0	.
chr10	59985814	59985815	chr10:59985815:C:A	rs12219264	C	A	A	Sox2_MA0143.3	-2	0	-	0	0	.
chr10	60258598	60258599	chr10:60258599:G:A	rs76415725	G	A	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr10	60281924	60281925	chr10:60281925:C:G	rs10821710	C	G	G	Sox2_MA0143.3	11	0	-	0	0	.
chr10	60296022	60296023	chr10:60296023:C:T	rs10821713	C	T	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr10	60302927	60302928	chr10:60302928:C:T	rs10740022	C	T	T	Sox2_MA0143.3	27	0	-	0	0	.
chr10	60363906	60363907	chr10:60363907:A:G	rs7917112	A	G	G	Sox2_MA0143.3	21	0	-	0	0	.
chr10	60363930	60363931	chr10:60363931:T:C	rs7902423	T	C	T	Sox2_MA0143.3	-3	0	-	0	0	.
chr10	60623830	60623831	chr10:60623831:A:T	rs10994432	A	T	T	Sox2_MA0143.3	20	0	+	0	0	.
chr10	60630499	60630500	chr10:60630500:A:G	rs2393676	A	G	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr10	60630835	60630836	chr10:60630836:A:G	rs10821807	A	G	A	Sox2_MA0143.3	18	0	-	0	0	.
chr10	60677889	60677890	chr10:60677890:T:C	rs7080822	T	C	T	Sox2_MA0143.3	-15	0	+	0	0	.
chr10	60677927	60677928	chr10:60677928:C:G	rs149459389	C	G	C	Sox2_MA0143.3	23	0	+	0	0	.
chr10	60678151	60678152	chr10:60678152:A:C	rs10509138	A	C	A	Sox2_MA0143.3	-18	0	-	0	0	.
chr10	60801936	60801937	chr10:60801937:C:A	rs2127356	C	A	A	Sox2_MA0143.3	-20	0	+	0	0	.
chr10	60811016	60811017	chr10:60811017:C:T	rs78515175	C	T	C	Sox2_MA0143.3	0	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr10	60820437	60820438	chr10:60820438:A:C	rs112152801	A	C	A	Sox2_MA0143.3	4	1	-	8.676919043985553	1.7681642646703322	CCATTGTG
chr10	60874862	60874863	chr10:60874863:C:T	rs2279942	C	T	T	Sox2_MA0143.3	22	0	-	0	0	.
chr10	61071914	61071915	chr10:61071915:C:G	rs4948270	C	G	C	Sox2_MA0143.3	26	0	+	0	0	.
chr10	61140886	61140887	chr10:61140887:G:A	rs115640383	G	A	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr10	61322662	61322663	chr10:61322663:C:G	rs1915442	C	G	G	Sox2_MA0143.3	-12	0	+	0	0	.
chr10	61346736	61346737	chr10:61346737:C:T	rs1324434762	C	T	C	Sox2_MA0143.3	13	0	+	0	0	.
chr10	61347195	61347196	chr10:61347196:G:A	rs550078342	G	A	G	Sox2_MA0143.3	23	0	-	0	0	.
chr10	61463766	61463767	chr10:61463767:T:C	rs758013414	T	C	T	Sox2_MA0143.3	19	0	-	0	0	.
chr10	61558260	61558261	chr10:61558261:G:C	rs2257189	G	C	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr10	61587933	61587934	chr10:61587934:C:G	rs2245309	C	G	G	Sox2_MA0143.3	-3	0	+	0	0	.
chr10	61641094	61641095	chr10:61641095:C:G	rs1993415	C	G	C	Sox2_MA0143.3	23	0	+	0	0	.
chr10	61758648	61758649	chr10:61758649:G:A	rs116498091	G	A	G	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr10	61793185	61793186	chr10:61793186:C:T	rs1002843976	C	T	C	Sox2_MA0143.3	16	0	-	0	0	.
chr10	61830677	61830678	chr10:61830678:C:T	rs10994942	C	T	C	Sox2_MA0143.3	19	0	-	0	0	.
chr10	61890531	61890532	chr10:61890532:A:T	rs74527239	A	T	A	Sox2_MA0143.3	6	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr10	61941977	61941978	chr10:61941978:T:C	rs75526350	T	C	T	Sox2_MA0143.3	13	0	+	0	0	.
chr10	61970886	61970887	chr10:61970887:T:C	rs34976581	T	C	T	Sox2_MA0143.3	-3	0	-	0	0	.
chr10	62037136	62037137	chr10:62037137:A:G	rs4281440	A	G	G	Sox2_MA0143.3	-16	0	-	0	0	.
chr10	62042978	62042979	chr10:62042979:G:C	rs7083509	G	C	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr10	62048506	62048507	chr10:62048507:C:T	rs2393745	C	T	T	Sox2_MA0143.3	12	0	-	0	0	.
chr10	62056071	62056072	chr10:62056072:C:T	rs10995019	C	T	C	Sox2_MA0143.3	11	0	+	0	0	.
chr10	62057723	62057724	chr10:62057724:C:T	rs149993578	C	T	C	Sox2_MA0143.3	8	0	-	0	0	.
chr10	62102024	62102025	chr10:62102025:G:A	rs9415642	G	A	G	Sox2_MA0143.3	1	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr10	62166474	62166475	chr10:62166475:G:A	rs10995070	G	A	G	Sox2_MA0143.3	25	0	+	0	0	.
chr10	62222159	62222160	chr10:62222160:G:A	rs4979778	G	A	G	Sox2_MA0143.3	8	0	-	0	0	.
chr10	62251022	62251023	chr10:62251023:G:A	rs1013334064	G	A	G	Sox2_MA0143.3	10	0	+	0	0	.
chr10	62326764	62326765	chr10:62326765:G:A	rs7086545	G	A	g	Sox2_MA0143.3	17	0	-	0	0	.
chr10	62472282	62472283	chr10:62472283:T:C	rs1955331	T	C	C	Sox2_MA0143.3	-20	0	-	0	0	.
chr10	62473248	62473249	chr10:62473249:G:A	rs74158922	G	A	G	Sox2_MA0143.3	12	0	+	0	0	.
chr10	62597233	62597234	chr10:62597234:C:T	rs1949359	C	T	C	Sox2_MA0143.3	5	1	-	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr10	62690412	62690413	chr10:62690413:G:A	rs144695446	G	A	G	Sox2_MA0143.3	27	0	-	0	0	.
chr10	62692032	62692033	chr10:62692033:C:T	chr10:62692033:C:T	C	T	C	Sox2_MA0143.3	19	0	-	0	0	.
chr10	62770421	62770422	chr10:62770422:G:T	rs80035273	G	T	G	Sox2_MA0143.3	0	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr10	62819298	62819299	chr10:62819299:C:T	rs61865885	C	T	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr10	62886460	62886461	chr10:62886461:C:T	rs12769822	C	T	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr10	62886461	62886462	chr10:62886462:T:C	rs10995344	T	C	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr10	62886465	62886466	chr10:62886466:T:G	rs74707950	T	G	T	Sox2_MA0143.3	-7	0	-	0	0	.
chr10	62886468	62886469	chr10:62886469:T:C	rs143131649	T	C	T	Sox2_MA0143.3	-10	0	-	0	0	.
chr10	62903892	62903893	chr10:62903893:G:A	rs7908942	G	A	g	Sox2_MA0143.3	13	0	-	0	0	.
chr10	62914069	62914070	chr10:62914070:C:T	rs4746725	C	T	t	Sox2_MA0143.3	0	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr10	62948607	62948608	chr10:62948608:G:A	rs181383544	G	A	-	Sox2_MA0143.3	23	0	-	0	0	.
chr10	63132291	63132292	chr10:63132292:G:T	rs4746974	G	T	G	Sox2_MA0143.3	21	0	+	0	0	.
chr10	63227651	63227652	chr10:63227652:G:A	rs10822149	G	A	G	Sox2_MA0143.3	22	0	+	0	0	.
chr10	63320966	63320967	chr10:63320967:T:C	rs10822156	T	C	T	Sox2_MA0143.3	18	0	-	0	0	.
chr10	63522067	63522068	chr10:63522068:G:A	rs1038768897	G	A	G	Sox2_MA0143.3	14	0	+	0	0	.
chr10	63593813	63593814	chr10:63593814:G:A	rs114425888	G	A	G	Sox2_MA0143.3	-11	0	+	0	0	.
chr10	63614664	63614665	chr10:63614665:C:T	rs77446769	C	T	C	Sox2_MA0143.3	24	0	-	0	0	.
chr10	63667024	63667025	chr10:63667025:G:A	rs36080042	G	A	G	Sox2_MA0143.3	23	0	-	0	0	.
chr10	63667038	63667039	chr10:63667039:G:C	rs76404637	G	C	G	Sox2_MA0143.3	9	0	-	0	0	.
chr10	63670285	63670286	chr10:63670286:C:T	rs141512763	C	T	C	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr10	63672558	63672559	chr10:63672559:T:C	rs1255458	T	C	C	Sox2_MA0143.3	3	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr10	63712258	63712259	chr10:63712259:G:T	rs116541466	G	T	G	Sox2_MA0143.3	0	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr10	63712267	63712268	chr10:63712268:C:A	rs149195485	C	A	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr10	63798387	63798388	chr10:63798388:A:G	rs34957130	A	G	A	Sox2_MA0143.3	15	0	+	0	0	.
chr10	63833800	63833801	chr10:63833801:G:T	rs2140390	G	T	G	Sox2_MA0143.3	5	1	+	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr10	63867130	63867131	chr10:63867131:C:T	rs1916438	C	T	T	Sox2_MA0143.3	5	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr10	63883824	63883825	chr10:63883825:A:G	rs7904765	A	G	A	Sox2_MA0143.3	-8	0	-	0	0	.
chr10	63915194	63915195	chr10:63915195:A:G	rs10822247	A	G	a	Sox2_MA0143.3	-13	0	-	0	0	.
chr10	64060605	64060606	chr10:64060606:T:C	rs193033948	T	C	T	Sox2_MA0143.3	-1	0	+	0	0	.
chr10	64097211	64097212	chr10:64097212:C:G	rs73291480	C	G	C	Sox2_MA0143.3	10	0	-	0	0	.
chr10	64468266	64468267	chr10:64468267:A:T	rs2493361	A	T	A	Sox2_MA0143.3	-5	0	+	0	0	.
chr10	64825755	64825756	chr10:64825756:A:G	rs7898508	A	G	A	Sox2_MA0143.3	21	0	+	0	0	.
chr10	64867892	64867893	chr10:64867893:G:A	rs11593566	G	A	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr10	64867934	64867935	chr10:64867935:G:C	rs1492441	G	C	G	Sox2_MA0143.3	26	0	+	0	0	.
chr10	65034717	65034718	chr10:65034718:A:G	rs7912124	A	G	A	Sox2_MA0143.3	16	0	-	0	0	.
chr10	65159590	65159591	chr10:65159591:T:C	rs12416189	T	C	T	Sox2_MA0143.3	4	1	+	8.864090315184848	1.9553355358696274	CCTTTGTG
chr10	65220221	65220222	chr10:65220222:T:C	rs16921063	T	C	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr10	65276856	65276857	chr10:65276857:C:T	rs971863	C	T	C	Sox2_MA0143.3	26	0	-	0	0	.
chr10	65640117	65640118	chr10:65640118:A:T	rs77596465	A	T	A	Sox2_MA0143.3	18	0	+	0	0	.
chr10	65718704	65718705	chr10:65718705:C:T	rs10740210	C	T	C	Sox2_MA0143.3	27	0	+	0	0	.
chr10	65869703	65869704	chr10:65869704:T:G	rs10822663	T	G	T	Sox2_MA0143.3	26	0	-	0	0	.
chr10	65995934	65995935	chr10:65995935:G:T	rs7088762	G	T	G	Sox2_MA0143.3	5	1	+	8.676919043985553	1.7681642646703324	CCATTGTG
chr10	65995935	65995936	chr10:65995936:T:G	rs77421706	T	G	T	Sox2_MA0143.3	6	1	+	8.676919043985553	1.7681642646703326	CCATTGTG
chr10	66026018	66026019	chr10:66026019:C:T	rs10762025	C	T	T	Sox2_MA0143.3	26	0	+	0	0	.
chr10	66211295	66211296	chr10:66211296:A:G	rs10822750	A	G	A	Sox2_MA0143.3	-15	0	+	0	0	.
chr10	66284083	66284084	chr10:66284084:T:G	rs12569810	T	G	T	Sox2_MA0143.3	12	0	-	0	0	.
chr10	66321768	66321769	chr10:66321769:A:T	rs60721708	A	T	A	Sox2_MA0143.3	-1	0	+	0	0	.
chr10	66569160	66569161	chr10:66569161:G:C	rs7919283	G	C	T	Sox2_MA0143.3	-3	0	-	0	0	.
chr10	66592412	66592413	chr10:66592413:T:G	rs4746600	T	G	T	Sox2_MA0143.3	2	1	+	8.864090315184848	2.5582713367092715	CCTTTGTG
chr10	66640810	66640811	chr10:66640811:A:T	rs2394261	A	T	T	Sox2_MA0143.3	17	0	+	0	0	.
chr10	66719714	66719715	chr10:66719715:G:C	rs1006769062	G	C	G	Sox2_MA0143.3	17	0	+	0	0	.
chr10	66789468	66789469	chr10:66789469:G:C	rs77335551	G	C	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr10	66833923	66833924	chr10:66833924:C:T	rs7911777	C	T	T	Sox2_MA0143.3	-3	0	+	0	0	.
chr10	66848449	66848450	chr10:66848450:T:C	rs7083846	T	C	C	Sox2_MA0143.3	21	0	+	0	0	.
chr10	66853248	66853249	chr10:66853249:G:A	rs10997413	G	A	G	Sox2_MA0143.3	17	0	-	0	0	.
chr10	66853250	66853251	chr10:66853251:A:G	rs10997414	A	G	G	Sox2_MA0143.3	15	0	-	0	0	.
chr10	66853283	66853284	chr10:66853284:C:T	rs10997415	C	T	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr10	66937780	66937781	chr10:66937781:A:T	rs10822946	A	T	A	Sox2_MA0143.3	12	0	+	0	0	.
chr10	66997159	66997160	chr10:66997160:A:G	rs1925611	A	G	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr10	67270089	67270090	chr10:67270090:A:G	rs7085054	A	G	G	Sox2_MA0143.3	3	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr10	67885010	67885011	chr10:67885011:C:A	rs550317521	C	A	C	Sox2_MA0143.3	21	0	-	0	0	.
chr10	67885019	67885020	chr10:67885020:A:G	rs199624804	A	G	A	Sox2_MA0143.3	12	0	-	0	0	.
chr10	68088540	68088541	chr10:68088541:G:A	rs541564	G	A	A	Sox2_MA0143.3	-16	0	+	0	0	.
chr10	68111653	68111654	chr10:68111654:A:T	rs60109489	A	T	A	Sox2_MA0143.3	23	0	-	0	0	.
chr10	68163777	68163778	chr10:68163778:C:T	rs2255381	C	T	T	Sox2_MA0143.3	20	0	-	0	0	.
chr10	68238297	68238298	chr10:68238298:A:C	rs1900005	A	C	A	Sox2_MA0143.3	-13	0	-	0	0	.
chr10	68251596	68251597	chr10:68251597:C:T	rs3858144	C	T	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr10	68330505	68330506	chr10:68330506:T:G	rs16925325	T	G	T	Sox2_MA0143.3	-10	0	+	0	0	.
chr10	68332919	68332920	chr10:68332920:T:C	rs137999074	T	C	T	Sox2_MA0143.3	4	1	+	3.5547341015215945	-3.3540206777936254	CCTTTGTA
chr10	68480686	68480687	chr10:68480687:A:G	rs1969758	A	G	N	Sox2_MA0143.3	26	0	-	0	0	.
chr10	68562741	68562742	chr10:68562742:C:T	rs76342145	C	T	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr10	68724987	68724988	chr10:68724988:G:A	rs1782327	G	A	A	Sox2_MA0143.3	1	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr10	68724988	68724989	chr10:68724989:G:T	rs1694345	G	T	T	Sox2_MA0143.3	0	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr10	68726455	68726456	chr10:68726456:C:T	rs188102318	C	T	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr10	68861329	68861330	chr10:68861330:T:C	rs4320849	T	C	t	Sox2_MA0143.3	-15	0	-	0	0	.
chr10	68900280	68900281	chr10:68900281:C:T	rs76003924	C	T	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr10	69014282	69014283	chr10:69014283:A:T	rs7078237	A	T	A	Sox2_MA0143.3	-12	0	-	0	0	.
chr10	69052282	69052283	chr10:69052283:T:C	rs7900176	T	C	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr10	69085424	69085425	chr10:69085425:A:G	rs4745976	A	G	G	Sox2_MA0143.3	2	1	-	9.800647049772198	3.494828071296623	CCTTTGTT
chr10	69124256	69124257	chr10:69124257:G:A	rs5030909	G	A	G	Sox2_MA0143.3	24	0	-	0	0	.
chr10	69124295	69124296	chr10:69124296:C:T	rs190540813	C	T	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr10	69124300	69124301	chr10:69124301:G:C	rs753711573	G	C	g	Sox2_MA0143.3	-20	0	-	0	0	.
chr10	69147926	69147927	chr10:69147927:T:C	rs35016149	T	C	T	Sox2_MA0143.3	15	0	+	0	0	.
chr10	69222572	69222573	chr10:69222573:C:T	rs138136153	C	T	C	Sox2_MA0143.3	25	0	+	0	0	.
chr10	69234543	69234544	chr10:69234544:T:C	rs10762268	T	C	T	Sox2_MA0143.3	4	1	+	8.676919043985553	1.7681642646703322	CCATTGTG
chr10	69271213	69271214	chr10:69271214:A:G	chr10:69271214:A:G	A	G	A	Sox2_MA0143.3	-9	0	+	0	0	.
chr10	69314571	69314572	chr10:69314572:T:C	rs77577720	T	C	T	Sox2_MA0143.3	17	0	-	0	0	.
chr10	69334723	69334724	chr10:69334724:C:T	rs11819564	C	T	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr10	69352624	69352625	chr10:69352625:C:T	rs150051322	C	T	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr10	69352637	69352638	chr10:69352638:A:G	rs10823350	A	G	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr10	69427321	69427322	chr10:69427322:C:T	rs112880895	C	T	C	Sox2_MA0143.3	15	0	-	0	0	.
chr10	69678028	69678029	chr10:69678029:G:A	rs1993824	G	A	G	Sox2_MA0143.3	25	0	+	0	0	.
chr10	69710544	69710545	chr10:69710545:C:T	rs957522293	C	T	C	Sox2_MA0143.3	19	0	-	0	0	.
chr10	69710583	69710584	chr10:69710584:C:A	rs111760874	C	A	C	Sox2_MA0143.3	5	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr10	69712625	69712626	chr10:69712626:G:A	rs34719291	G	A	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr10	69712668	69712669	chr10:69712669:C:T	rs981696981	C	T	C	Sox2_MA0143.3	26	0	+	0	0	.
chr10	69732938	69732939	chr10:69732939:C:G	rs72803022	C	G	C	Sox2_MA0143.3	25	0	-	0	0	.
chr10	69762671	69762672	chr10:69762672:T:C	rs77549803	T	C	T	Sox2_MA0143.3	2	1	+	8.864090315184848	2.5582713367092715	CCTTTGTG
chr10	69766806	69766807	chr10:69766807:G:A	rs74997133	G	A	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr10	69766844	69766845	chr10:69766845:G:T	rs7393392	G	T	G	Sox2_MA0143.3	20	0	+	0	0	.
chr10	69793162	69793163	chr10:69793163:C:T	rs72803101	C	T	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr10	69838771	69838772	chr10:69838772:A:C	rs7913904	A	C	A	Sox2_MA0143.3	3	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr10	69880882	69880883	chr10:69880883:G:A	rs118132651	G	A	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr10	69900381	69900382	chr10:69900382:G:A	rs3858160	G	A	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr10	69938635	69938636	chr10:69938636:G:A	rs3793822	G	A	G	Sox2_MA0143.3	24	0	-	0	0	.
chr10	69956321	69956322	chr10:69956322:A:G	rs3750776	A	G	A	Sox2_MA0143.3	3	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr10	69957846	69957847	chr10:69957847:C:A	rs76784645	C	A	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr10	69973165	69973166	chr10:69973166:A:T	rs78170049	A	T	A	Sox2_MA0143.3	16	0	+	0	0	.
chr10	70062847	70062848	chr10:70062848:G:C	rs10999111	G	C	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr10	70089524	70089525	chr10:70089525:T:G	rs4746952	T	G	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr10	70140489	70140490	chr10:70140490:C:T	rs6480442	C	T	C	Sox2_MA0143.3	10	0	-	0	0	.
chr10	70194427	70194428	chr10:70194428:G:A	rs75854780	G	A	G	Sox2_MA0143.3	9	0	+	0	0	.
chr10	70233030	70233031	chr10:70233031:C:G	rs4746981	C	G	G	Sox2_MA0143.3	5	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr10	70234611	70234612	chr10:70234612:G:C	rs4746982	G	C	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr10	70254292	70254293	chr10:70254293:C:T	rs74624736	C	T	C	Sox2_MA0143.3	18	0	-	0	0	.
chr10	70274752	70274753	chr10:70274753:G:A	rs12571636	G	A	G	Sox2_MA0143.3	13	0	-	0	0	.
chr10	70278642	70278643	chr10:70278643:G:A	rs868075	G	A	G	Sox2_MA0143.3	17	0	+	0	0	.
chr10	70309275	70309276	chr10:70309276:C:A	rs72809217	C	A	C	Sox2_MA0143.3	26	0	+	0	0	.
chr10	70405252	70405253	chr10:70405253:T:C	rs140066769	T	C	T	Sox2_MA0143.3	-12	0	+	0	0	.
chr10	70441214	70441215	chr10:70441215:C:A	rs35738920	C	A	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr10	70493477	70493478	chr10:70493478:G:A	rs184439306	G	A	G	Sox2_MA0143.3	13	0	-	0	0	.
chr10	70503886	70503887	chr10:70503887:T:C	rs10762386	T	C	C	Sox2_MA0143.3	2	1	+	3.5547341015215945	-2.751084876953981	CCTTTGTA
chr10	70590180	70590181	chr10:70590181:C:T	rs73274451	C	T	C	Sox2_MA0143.3	22	0	+	0	0	.
chr10	70602832	70602833	chr10:70602833:A:G	rs3758563	A	G	G	Sox2_MA0143.3	22	0	+	0	0	.
chr10	70634587	70634588	chr10:70634588:G:A	rs7092734	G	A	G	Sox2_MA0143.3	9	0	-	0	0	.
chr10	70689572	70689573	chr10:70689573:T:C	rs4747074	T	C	T	Sox2_MA0143.3	22	0	+	0	0	.
chr10	70695793	70695794	chr10:70695794:G:A	rs7072645	G	A	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr10	70712015	70712016	chr10:70712016:A:G	rs12777075	A	G	A	Sox2_MA0143.3	4	1	-	8.864090315184848	1.9553355358696274	CCTTTGTG
chr10	70716579	70716580	chr10:70716580:T:C	rs9663577	T	C	C	Sox2_MA0143.3	22	0	+	0	0	.
chr10	70755531	70755532	chr10:70755532:C:T	rs12762984	C	T	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr10	70757839	70757840	chr10:70757840:T:G	rs10999514	T	G	T	Sox2_MA0143.3	-3	0	+	0	0	.
chr10	70757840	70757841	chr10:70757841:C:T	rs10999515	C	T	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr10	70787191	70787192	chr10:70787192:T:C	rs2153376	T	C	T	Sox2_MA0143.3	6	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr10	70983951	70983952	chr10:70983952:C:A	rs911010727	C	A	C	Sox2_MA0143.3	0	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr10	70985575	70985576	chr10:70985576:C:A	rs10999624	C	A	C	Sox2_MA0143.3	1	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr10	70998410	70998411	chr10:70998411:T:C	rs11597069	T	C	T	Sox2_MA0143.3	9	0	+	0	0	.
chr10	71067546	71067547	chr10:71067547:G:A	rs2894133	G	A	g	Sox2_MA0143.3	-6	0	-	0	0	.
chr10	71070507	71070508	chr10:71070508:T:C	rs7897554	T	C	C	Sox2_MA0143.3	8	0	+	0	0	.
chr10	71071592	71071593	chr10:71071593:C:T	rs7093386	C	T	C	Sox2_MA0143.3	23	0	-	0	0	.
chr10	71107111	71107112	chr10:71107112:T:C	rs140544913	T	C	T	Sox2_MA0143.3	-20	0	-	0	0	.
chr10	71137764	71137765	chr10:71137765:A:T	rs10999692	A	T	A	Sox2_MA0143.3	23	0	-	0	0	.
chr10	71142200	71142201	chr10:71142201:G:A	rs10740366	G	A	A	Sox2_MA0143.3	-9	0	+	0	0	.
chr10	71144665	71144666	chr10:71144666:C:A	rs10999694	C	A	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr10	71144706	71144707	chr10:71144707:T:C	rs10999695	T	C	T	Sox2_MA0143.3	23	0	+	0	0	.
chr10	71157632	71157633	chr10:71157633:G:A	rs7075641	G	A	A	Sox2_MA0143.3	-5	0	-	0	0	.
chr10	71243905	71243906	chr10:71243906:A:G	rs78148042	A	G	A	Sox2_MA0143.3	2	1	+	9.613475778572903	3.494828071296623	CCATTGTT
chr10	71271872	71271873	chr10:71271873:G:A	rs10733880	G	A	A	Sox2_MA0143.3	-20	0	+	0	0	.
chr10	71271972	71271973	chr10:71271973:G:A	rs10733881	G	A	G	Sox2_MA0143.3	17	0	+	0	0	.
chr10	71395372	71395373	chr10:71395373:G:A	rs552579402	G	A	G	Sox2_MA0143.3	20	0	+	0	0	.
chr10	71409284	71409285	chr10:71409285:G:A	rs12771051	G	A	G	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr10	71422351	71422352	chr10:71422352:G:A	rs143431631	G	A	G	Sox2_MA0143.3	18	0	+	0	0	.
chr10	71443661	71443662	chr10:71443662:T:C	rs7081038	T	C	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr10	71460735	71460736	chr10:71460736:T:C	rs755579	T	C	C	Sox2_MA0143.3	15	0	+	0	0	.
chr10	71529244	71529245	chr10:71529245:G:A	rs111697491	G	A	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr10	71567665	71567666	chr10:71567666:C:T	rs17635709	C	T	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr10	71576015	71576016	chr10:71576016:G:C	rs35383128	G	C	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr10	71581433	71581434	chr10:71581434:C:A	rs12766154	C	A	C	Sox2_MA0143.3	9	0	-	0	0	.
chr10	71581462	71581463	chr10:71581463:C:T	rs111555772	C	T	C	Sox2_MA0143.3	-20	0	-	0	0	.
chr10	71584831	71584832	chr10:71584832:A:G	rs16929083	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr10	71692574	71692575	chr10:71692575:C:T	rs1227080	C	T	T	Sox2_MA0143.3	-11	0	+	0	0	.
chr10	71697257	71697258	chr10:71697258:T:C	rs10999957	T	C	C	Sox2_MA0143.3	9	0	-	0	0	.
chr10	71705480	71705481	chr10:71705481:G:A	rs75548298	G	A	G	Sox2_MA0143.3	-2	0	+	0	0	.
chr10	71757706	71757707	chr10:71757707:G:A	rs116746342	G	A	A	Sox2_MA0143.3	-2	0	+	0	0	.
chr10	71769537	71769538	chr10:71769538:G:T	rs10823841	G	T	G	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr10	71802390	71802391	chr10:71802391:T:C	rs10823848	T	C	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr10	71857490	71857491	chr10:71857491:G:A	rs12259386	G	A	g	Sox2_MA0143.3	8	0	+	0	0	.
chr10	71911342	71911343	chr10:71911343:G:A	rs184558675	G	A	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr10	71933969	71933970	chr10:71933970:G:A	rs11000101	G	A	G	Sox2_MA0143.3	0	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr10	71958156	71958157	chr10:71958157:C:T	rs11527412	C	T	T	Sox2_MA0143.3	-5	0	+	0	0	.
chr10	71981474	71981475	chr10:71981475:G:A	rs181976592	G	A	G	Sox2_MA0143.3	1	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr10	72031060	72031061	chr10:72031061:G:A	rs1245531	G	A	G	Sox2_MA0143.3	-16	0	-	0	0	.
chr10	72073596	72073597	chr10:72073597:C:T	rs748035	C	T	C	Sox2_MA0143.3	19	0	+	0	0	.
chr10	72243840	72243841	chr10:72243841:C:T	rs186026592	C	T	C	Sox2_MA0143.3	16	0	-	0	0	.
chr10	72355299	72355300	chr10:72355300:A:G	rs78415942	A	G	G	Sox2_MA0143.3	4	1	-	9.206767037375712	2.2980122580604916	CCTTTGTC
chr10	72355320	72355321	chr10:72355321:C:T	rs189887317	C	T	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr10	72712297	72712298	chr10:72712298:A:C	rs186422079	A	C	A	Sox2_MA0143.3	-4	0	+	0	0	.
chr10	72835246	72835247	chr10:72835247:G:A	rs7093820	G	A	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr10	73032779	73032780	chr10:73032780:A:G	rs79452543	A	G	A	Sox2_MA0143.3	-15	0	-	0	0	.
chr10	73041714	73041715	chr10:73041715:T:C	rs80326975	T	C	T	Sox2_MA0143.3	-19	0	+	0	0	.
chr10	73168634	73168635	chr10:73168635:C:T	rs151008315	C	T	c	Sox2_MA0143.3	-9	0	+	0	0	.
chr10	73262311	73262312	chr10:73262312:A:C	rs3998306	A	C	C	Sox2_MA0143.3	16	0	+	0	0	.
chr10	73415213	73415214	chr10:73415214:C:T	rs77046628	C	T	C	Sox2_MA0143.3	10	0	+	0	0	.
chr10	73496388	73496389	chr10:73496389:G:A	rs41313836	G	A	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr10	73643648	73643649	chr10:73643649:C:T	rs114665826	C	T	C	Sox2_MA0143.3	10	0	+	0	0	.
chr10	73650208	73650209	chr10:73650209:T:C	rs9664184	T	C	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr10	73650233	73650234	chr10:73650234:T:C	rs9664186	T	C	t	Sox2_MA0143.3	6	1	+	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr10	73840257	73840258	chr10:73840258:A:G	rs12573092	A	G	G	Sox2_MA0143.3	21	0	-	0	0	.
chr10	73879878	73879879	chr10:73879879:G:A	rs181687971	G	A	G	Sox2_MA0143.3	20	0	-	0	0	.
chr10	73894327	73894328	chr10:73894328:G:A	rs2633309	G	A	a	Sox2_MA0143.3	-6	0	-	0	0	.
chr10	73950271	73950272	chr10:73950272:G:A	rs56215513	G	A	A	Sox2_MA0143.3	19	0	-	0	0	.
chr10	73958521	73958522	chr10:73958522:C:T	rs114520886	C	T	T	Sox2_MA0143.3	-10	0	+	0	0	.
chr10	73958535	73958536	chr10:73958536:T:A	rs11595243	T	A	C	Sox2_MA0143.3	4	1	+	8.676919043985553	1.7681642646703322	CCATTGTG
chr10	74000943	74000944	chr10:74000944:A:G	rs12357316	A	G	A	Sox2_MA0143.3	18	0	-	0	0	.
chr10	74040153	74040154	chr10:74040154:A:G	rs60297489	A	G	A	Sox2_MA0143.3	18	0	+	0	0	.
chr10	74239410	74239411	chr10:74239411:A:G	rs16931294	A	G	A	Sox2_MA0143.3	-16	0	-	0	0	.
chr10	74503502	74503503	chr10:74503503:G:A	rs3862535	G	A	A	Sox2_MA0143.3	-13	0	-	0	0	.
chr10	74593813	74593814	chr10:74593814:A:C	rs114215919	A	C	A	Sox2_MA0143.3	25	0	+	0	0	.
chr10	74609569	74609570	chr10:74609570:A:G	rs148027659	A	G	A	Sox2_MA0143.3	18	0	+	0	0	.
chr10	74753130	74753131	chr10:74753131:C:G	rs11001137	C	G	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr10	74825641	74825642	chr10:74825642:G:A	rs1263617698	G	A	g	Sox2_MA0143.3	1	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr10	74913703	74913704	chr10:74913704:G:T	rs6480764	G	T	T	Sox2_MA0143.3	-1	0	-	0	0	.
chr10	74917640	74917641	chr10:74917641:A:C	rs11001199	A	C	A	Sox2_MA0143.3	-15	0	+	0	0	.
chr10	74917652	74917653	chr10:74917653:A:G	rs754623515	A	G	A	Sox2_MA0143.3	-3	0	+	0	0	.
chr10	74940591	74940592	chr10:74940592:C:T	rs10824248	C	T	T	Sox2_MA0143.3	20	0	+	0	0	.
chr10	74947980	74947981	chr10:74947981:G:A	rs60093579	G	A	A	Sox2_MA0143.3	9	0	-	0	0	.
chr10	74947999	74948000	chr10:74948000:A:G	rs16931866	A	G	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr10	75045065	75045066	chr10:75045066:A:G	rs7901229	A	G	G	Sox2_MA0143.3	23	0	-	0	0	.
chr10	75062501	75062502	chr10:75062502:G:A	rs11001271	G	A	A	Sox2_MA0143.3	1	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr10	75072400	75072401	chr10:75072401:G:A	rs116412334	G	A	A	Sox2_MA0143.3	27	0	-	0	0	.
chr10	75103597	75103598	chr10:75103598:A:G	rs4746263	A	G	g	Sox2_MA0143.3	14	0	+	0	0	.
chr10	75136803	75136804	chr10:75136804:T:C	rs7079694	T	C	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr10	75143807	75143808	chr10:75143808:A:C	rs12247349	A	C	A	Sox2_MA0143.3	-18	0	+	0	0	.
chr10	75198834	75198835	chr10:75198835:G:A	rs78380461	G	A	G	Sox2_MA0143.3	13	0	-	0	0	.
chr10	75211413	75211414	chr10:75211414:T:G	chr10:75211414:T:G	T	G	T	Sox2_MA0143.3	-4	0	+	0	0	.
chr10	75211423	75211424	chr10:75211424:T:C	rs373845289	T	C	T	Sox2_MA0143.3	6	1	+	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr10	75226982	75226983	chr10:75226983:T:C	rs1259498	T	C	t	Sox2_MA0143.3	18	0	+	0	0	.
chr10	75230486	75230487	chr10:75230487:C:T	rs11001335	C	T	C	Sox2_MA0143.3	7	1	+	9.019595766176417	9.613475778572903	CCATTGTC
chr10	75230492	75230493	chr10:75230493:T:C	rs556535157	T	C	T	Sox2_MA0143.3	13	0	+	0	0	.
chr10	75377745	75377746	chr10:75377746:T:C	rs113429919	T	C	T	Sox2_MA0143.3	11	0	+	0	0	.
chr10	75418935	75418936	chr10:75418936:T:G	rs112521425	T	G	T	Sox2_MA0143.3	15	0	+	0	0	.
chr10	75592151	75592152	chr10:75592152:G:T	rs113429983	G	T	G	Sox2_MA0143.3	-3	0	+	0	0	.
chr10	75597344	75597345	chr10:75597345:T:C	rs7911525	T	C	C	Sox2_MA0143.3	23	0	-	0	0	.
chr10	75614878	75614879	chr10:75614879:A:G	rs4532978	A	G	A	Sox2_MA0143.3	10	0	+	0	0	.
chr10	75633159	75633160	chr10:75633160:C:T	rs35537467	C	T	C	Sox2_MA0143.3	1	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr10	75683279	75683280	chr10:75683280:A:G	rs2463955	A	G	G	Sox2_MA0143.3	13	0	-	0	0	.
chr10	75683298	75683299	chr10:75683299:A:T	rs941436209	A	T	A	Sox2_MA0143.3	-6	0	-	0	0	.
chr10	75701136	75701137	chr10:75701137:C:A	rs1162450492	C	A	C	Sox2_MA0143.3	1	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr10	75773187	75773188	chr10:75773188:C:T	rs61860541	C	T	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr10	75803988	75803989	chr10:75803989:G:A	rs369517732	G	A	G	Sox2_MA0143.3	23	0	+	0	0	.
chr10	75862933	75862934	chr10:75862934:G:C	rs1323076	G	C	G	Sox2_MA0143.3	25	0	-	0	0	.
chr10	75880084	75880085	chr10:75880085:G:A	rs6480792	G	A	A	Sox2_MA0143.3	-9	0	+	0	0	.
chr10	75967147	75967148	chr10:75967148:T:C	rs9415141	T	C	T	Sox2_MA0143.3	-19	0	+	0	0	.
chr10	76007478	76007479	chr10:76007479:T:C	rs11001574	T	C	T	Sox2_MA0143.3	-19	0	+	0	0	.
chr10	76022897	76022898	chr10:76022898:C:T	rs10824354	C	T	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr10	76082463	76082464	chr10:76082464:G:C	rs73281587	G	C	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr10	76103157	76103158	chr10:76103158:C:G	rs77522631	C	G	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr10	76150658	76150659	chr10:76150659:C:T	rs138793309	C	T	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr10	76232748	76232749	chr10:76232749:A:G	rs116861773	A	G	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr10	76437327	76437328	chr10:76437328:T:C	rs1873467	T	C	C	Sox2_MA0143.3	-20	0	-	0	0	.
chr10	76467498	76467499	chr10:76467499:A:C	rs12218713	A	C	A	Sox2_MA0143.3	4	1	-	9.206767037375712	2.2980122580604916	CCTTTGTC
chr10	76469994	76469995	chr10:76469995:A:C	rs12570056	A	C	A	Sox2_MA0143.3	13	0	-	0	0	.
chr10	76543800	76543801	chr10:76543801:T:G	chr10:76543801:T:G	T	G	T	Sox2_MA0143.3	-6	0	+	0	0	.
chr10	76632557	76632558	chr10:76632558:A:T	rs140713722	A	T	A	Sox2_MA0143.3	27	0	-	0	0	.
chr10	76632559	76632560	chr10:76632560:A:G	rs7909808	A	G	A	Sox2_MA0143.3	25	0	-	0	0	.
chr10	76650038	76650039	chr10:76650039:G:C	rs11819295	G	C	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr10	76676164	76676165	chr10:76676165:C:G	rs201339805	C	G	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr10	76911370	76911371	chr10:76911371:T:C	rs574011174	T	C	T	Sox2_MA0143.3	-3	0	+	0	0	.
chr10	76937780	76937781	chr10:76937781:C:T	rs7070554	C	T	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr10	77005034	77005035	chr10:77005035:G:A	rs1873691	G	A	A	Sox2_MA0143.3	-8	0	+	0	0	.
chr10	77060810	77060811	chr10:77060811:A:G	rs10824487	A	G	A	Sox2_MA0143.3	16	0	-	0	0	.
chr10	77104932	77104933	chr10:77104933:G:T	rs926732100	G	T	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr10	77156640	77156641	chr10:77156641:C:T	rs562187	C	T	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr10	77229878	77229879	chr10:77229879:T:C	rs2169673	T	C	T	Sox2_MA0143.3	13	0	+	0	0	.
chr10	77266391	77266392	chr10:77266392:C:A	rs74440280	C	A	C	Sox2_MA0143.3	18	0	+	0	0	.
chr10	77315237	77315238	chr10:77315238:C:T	rs672746	C	T	T	Sox2_MA0143.3	5	1	-	9.019595766176417	2.110840986861197	CCATTGTC
chr10	77423072	77423073	chr10:77423073:T:A	rs287187	T	A	A	Sox2_MA0143.3	-3	0	+	0	0	.
chr10	77469849	77469850	chr10:77469850:A:G	rs696211	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr10	77495262	77495263	chr10:77495263:C:G	rs1371458	C	G	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr10	77511869	77511870	chr10:77511870:T:C	rs4979888	T	C	C	Sox2_MA0143.3	12	0	-	0	0	.
chr10	77527394	77527395	chr10:77527395:G:A	rs116995868	G	A	G	Sox2_MA0143.3	18	0	-	0	0	.
chr10	77567472	77567473	chr10:77567473:A:G	rs2670164	A	G	A	Sox2_MA0143.3	-16	0	+	0	0	.
chr10	77594712	77594713	chr10:77594713:A:G	rs2670117	A	G	G	Sox2_MA0143.3	7	1	-	9.613475778572903	9.019595766176417	CCATTGTT
chr10	77651981	77651982	chr10:77651982:G:A	rs1877998	G	A	G	Sox2_MA0143.3	5	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr10	77689906	77689907	chr10:77689907:A:C	rs7098023	A	C	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr10	77813058	77813059	chr10:77813059:T:C	rs145391866	T	C	T	Sox2_MA0143.3	17	0	-	0	0	.
chr10	77840089	77840090	chr10:77840090:A:G	rs1248669	A	G	G	Sox2_MA0143.3	22	0	+	0	0	.
chr10	77852008	77852009	chr10:77852009:A:G	rs1248690	A	G	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr10	77857889	77857890	chr10:77857890:G:A	rs11002317	G	A	G	Sox2_MA0143.3	24	0	-	0	0	.
chr10	77940295	77940296	chr10:77940296:G:T	rs1248890	G	T	T	Sox2_MA0143.3	13	0	-	0	0	.
chr10	78029958	78029959	chr10:78029959:G:T	rs191207560	G	T	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr10	78177404	78177405	chr10:78177405:G:C	rs58180095	G	C	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr10	78215616	78215617	chr10:78215617:C:T	rs115321474	C	T	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr10	78303219	78303220	chr10:78303220:C:T	rs150802471	C	T	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr10	78348534	78348535	chr10:78348535:G:T	rs2670203	G	T	T	Sox2_MA0143.3	-20	0	+	0	0	.
chr10	78410821	78410822	chr10:78410822:T:C	rs71479623	T	C	T	Sox2_MA0143.3	13	0	+	0	0	.
chr10	78435931	78435932	chr10:78435932:G:A	rs12247929	G	A	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr10	78457708	78457709	chr10:78457709:G:A	rs12767022	G	A	G	Sox2_MA0143.3	5	1	+	9.019595766176417	2.110840986861197	CCATTGTC
chr10	78500658	78500659	chr10:78500659:C:T	rs4979824	C	T	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr10	78504561	78504562	chr10:78504562:A:T	rs11002582	A	T	T	Sox2_MA0143.3	2	1	-	8.864090315184848	8.676919043985553	CCTTTGTG
chr10	78685910	78685911	chr10:78685911:G:A	rs473031	G	A	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr10	78717797	78717798	chr10:78717798:C:T	rs1369038	C	T	T	Sox2_MA0143.3	-6	0	-	0	0	.
chr10	78718224	78718225	chr10:78718225:A:T	rs74141365	A	T	A	Sox2_MA0143.3	9	0	+	0	0	.
chr10	78746819	78746820	chr10:78746820:G:A	rs12768216	G	A	g	Sox2_MA0143.3	1	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr10	78792489	78792490	chr10:78792490:A:G	rs11002674	A	G	A	Sox2_MA0143.3	-9	0	+	0	0	.
chr10	78844856	78844857	chr10:78844857:T:C	rs1439777	T	C	C	Sox2_MA0143.3	6	1	+	8.676919043985553	1.7681642646703326	CCATTGTG
chr10	78893099	78893100	chr10:78893100:G:T	rs772841	G	T	G	Sox2_MA0143.3	26	0	-	0	0	.
chr10	78893145	78893146	chr10:78893146:G:A	rs772842	G	A	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr10	78913774	78913775	chr10:78913775:T:G	rs1030525581	T	G	T	Sox2_MA0143.3	26	0	-	0	0	.
chr10	78924467	78924468	chr10:78924468:G:A	rs16936610	G	A	G	Sox2_MA0143.3	-3	0	-	0	0	.
chr10	78985891	78985892	chr10:78985892:G:C	rs745494	G	C	C	Sox2_MA0143.3	24	0	+	0	0	.
chr10	79006964	79006965	chr10:79006965:G:A	rs67515591	G	A	G	Sox2_MA0143.3	17	0	-	0	0	.
chr10	79025400	79025401	chr10:79025401:G:A	rs1399794853	G	A	G	Sox2_MA0143.3	13	0	-	0	0	.
chr10	79025431	79025432	chr10:79025432:G:A	rs138105401	G	A	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr10	79045258	79045259	chr10:79045259:T:C	rs67372909	T	C	T	Sox2_MA0143.3	-5	0	+	0	0	.
chr10	79082716	79082717	chr10:79082717:C:T	rs11812481	C	T	c	Sox2_MA0143.3	15	0	-	0	0	.
chr10	79095665	79095666	chr10:79095666:G:A	rs10762844	G	A	A	Sox2_MA0143.3	-6	0	-	0	0	.
chr10	79129829	79129830	chr10:79129830:T:C	rs74355670	T	C	T	Sox2_MA0143.3	25	0	-	0	0	.
chr10	79129868	79129869	chr10:79129869:G:A	rs113300085	G	A	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr10	79181659	79181660	chr10:79181660:G:C	rs703984	G	C	G	Sox2_MA0143.3	-9	0	+	0	0	.
chr10	79192264	79192265	chr10:79192265:A:G	rs574727498	A	G	A	Sox2_MA0143.3	8	0	+	0	0	.
chr10	79197085	79197086	chr10:79197086:A:G	rs767888913	A	G	A	Sox2_MA0143.3	17	0	+	0	0	.
chr10	79197095	79197096	chr10:79197096:C:T	rs117183622	C	T	C	Sox2_MA0143.3	27	0	+	0	0	.
chr10	79219281	79219282	chr10:79219282:A:G	rs716303	A	G	A	Sox2_MA0143.3	4	1	-	8.864090315184848	1.9553355358696274	CCTTTGTG
chr10	79219663	79219664	chr10:79219664:A:G	rs73302169	A	G	A	Sox2_MA0143.3	-2	0	+	0	0	.
chr10	79236582	79236583	chr10:79236583:C:G	rs140744431	C	G	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr10	79236593	79236594	chr10:79236594:A:C	chr10:79236594:A:C	A	C	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr10	79236593	79236594	chr10:79236594:A:G	rs1313056	A	G	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr10	79243608	79243609	chr10:79243609:C:T	rs532050381	C	T	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr10	79251831	79251832	chr10:79251832:C:T	rs11002892	C	T	c	Sox2_MA0143.3	-10	0	+	0	0	.
chr10	79282092	79282093	chr10:79282093:G:A	rs116987752	G	A	G	Sox2_MA0143.3	14	0	-	0	0	.
chr10	79314490	79314491	chr10:79314491:C:T	rs11002921	C	T	C	Sox2_MA0143.3	9	0	+	0	0	.
chr10	79349701	79349702	chr10:79349702:C:T	rs2233719	C	T	C	Sox2_MA0143.3	11	0	-	0	0	.
chr10	79351519	79351520	chr10:79351520:G:A	rs139864126	G	A	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr10	79381642	79381643	chr10:79381643:T:C	rs4980068	T	C	T	Sox2_MA0143.3	-3	0	-	0	0	.
chr10	79396997	79396998	chr10:79396998:G:A	rs6480936	G	A	G	Sox2_MA0143.3	18	0	+	0	0	.
chr10	79399281	79399282	chr10:79399282:C:T	rs10824749	C	T	C	Sox2_MA0143.3	10	0	-	0	0	.
chr10	79406322	79406323	chr10:79406323:G:A	rs10740506	G	A	G	Sox2_MA0143.3	1	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr10	79451269	79451270	chr10:79451270:G:A	rs56362036	G	A	G	Sox2_MA0143.3	7	1	-	9.206767037375712	9.800647049772198	CCTTTGTC
chr10	79464672	79464673	chr10:79464673:G:A	rs34799261	G	A	A	Sox2_MA0143.3	-18	0	+	0	0	.
chr10	79554011	79554012	chr10:79554012:G:T	rs61860549	G	T	.	Sox2_MA0143.3	-10	0	-	0	0	.
chr10	79589079	79589080	chr10:79589080:C:G	rs61862075	C	G	C	Sox2_MA0143.3	25	0	+	0	0	.
chr10	79630160	79630161	chr10:79630161:G:A	rs1427811	G	A	g	Sox2_MA0143.3	1	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr10	79630179	79630180	chr10:79630180:G:A	rs1427810	G	A	g	Sox2_MA0143.3	-18	0	-	0	0	.
chr10	79666791	79666792	chr10:79666792:T:G	rs1650229	T	G	t	Sox2_MA0143.3	4	1	+	9.800647049772198	2.8918922704569785	CCTTTGTT
chr10	79780775	79780776	chr10:79780776:T:C	rs368492566	T	C	t	Sox2_MA0143.3	-11	0	-	0	0	.
chr10	79921395	79921396	chr10:79921396:G:A	rs878795	G	A	a	Sox2_MA0143.3	-10	0	+	0	0	.
chr10	79944755	79944756	chr10:79944756:A:G	rs2181204	A	G	C	Sox2_MA0143.3	6	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr10	79949518	79949519	chr10:79949519:A:T	rs193153337	A	T	A	Sox2_MA0143.3	16	0	+	0	0	.
chr10	79949522	79949523	chr10:79949523:C:T	rs12219080	C	T	C	Sox2_MA0143.3	20	0	+	0	0	.
chr10	80037098	80037099	chr10:80037099:T:G	rs10749508	T	G	-	Sox2_MA0143.3	8	0	+	0	0	.
chr10	80146105	80146106	chr10:80146106:C:T	rs115960100	C	T	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr10	80157729	80157730	chr10:80157730:T:C	rs1802932	T	C	T	Sox2_MA0143.3	-18	0	+	0	0	.
chr10	80209146	80209147	chr10:80209147:A:G	rs11202112	A	G	a	Sox2_MA0143.3	17	0	+	0	0	.
chr10	80304468	80304469	chr10:80304469:G:A	rs72815305	G	A	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr10	80422539	80422540	chr10:80422540:G:A	rs1870142	G	A	A	Sox2_MA0143.3	-20	0	+	0	0	.
chr10	80449835	80449836	chr10:80449836:A:G	rs11202957	A	G	A	Sox2_MA0143.3	23	0	-	0	0	.
chr10	80450859	80450860	chr10:80450860:C:T	rs10887902	C	T	T	Sox2_MA0143.3	-4	0	+	0	0	.
chr10	80450884	80450885	chr10:80450885:G:A	rs10887903	G	A	A	Sox2_MA0143.3	21	0	+	0	0	.
chr10	80454054	80454055	chr10:80454055:A:T	chr10:80454055:A:T	A	T	A	Sox2_MA0143.3	-13	0	-	0	0	.
chr10	80467386	80467387	chr10:80467387:A:G	rs73305144	A	G	A	Sox2_MA0143.3	24	0	-	0	0	.
chr10	80468240	80468241	chr10:80468241:A:G	rs117685683	A	G	A	Sox2_MA0143.3	2	1	+	9.019595766176417	2.900948058900136	CCATTGTC
chr10	80468242	80468243	chr10:80468243:T:C	rs145895790	T	C	T	Sox2_MA0143.3	4	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr10	80468257	80468258	chr10:80468258:C:T	rs74343381	C	T	C	Sox2_MA0143.3	19	0	+	0	0	.
chr10	80474723	80474724	chr10:80474724:C:T	rs61188968	C	T	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr10	80511457	80511458	chr10:80511458:C:T	rs76325078	C	T	C	Sox2_MA0143.3	8	0	-	0	0	.
chr10	80575452	80575453	chr10:80575453:T:C	rs4547039	T	C	C	Sox2_MA0143.3	19	0	-	0	0	.
chr10	80575488	80575489	chr10:80575489:A:G	rs4291622	A	G	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr10	80586503	80586504	chr10:80586504:T:C	rs139392262	T	C	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr10	80586504	80586505	chr10:80586505:G:T	rs12767850	G	T	G	Sox2_MA0143.3	-14	0	+	0	0	.
chr10	80586523	80586524	chr10:80586524:G:A	rs189765870	G	A	G	Sox2_MA0143.3	5	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr10	80712075	80712076	chr10:80712076:T:C	rs6586155	T	C	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr10	80896036	80896037	chr10:80896037:A:G	rs735687	A	G	G	Sox2_MA0143.3	21	0	+	0	0	.
chr10	80925902	80925903	chr10:80925903:T:C	rs57400544	T	C	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr10	81341782	81341783	chr10:81341783:C:G	rs265516	C	G	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr10	81570702	81570703	chr10:81570703:A:G	rs72816018	A	G	A	Sox2_MA0143.3	27	0	-	0	0	.
chr10	81650266	81650267	chr10:81650267:C:T	rs73307336	C	T	C	Sox2_MA0143.3	0	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr10	81683550	81683551	chr10:81683551:T:C	rs113185518	T	C	T	Sox2_MA0143.3	-7	0	+	0	0	.
chr10	81733764	81733765	chr10:81733765:T:C	rs10748813	T	C	T	Sox2_MA0143.3	19	0	+	0	0	.
chr10	81831185	81831186	chr10:81831186:C:T	rs112935146	C	T	C	Sox2_MA0143.3	15	0	-	0	0	.
chr10	82085082	82085083	chr10:82085083:G:A	rs41412145	G	A	G	Sox2_MA0143.3	12	0	-	0	0	.
chr10	82085128	82085129	chr10:82085129:G:A	rs145041484	G	A	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr10	82372152	82372153	chr10:82372153:A:G	rs11194002	A	G	A	Sox2_MA0143.3	25	0	-	0	0	.
chr10	82389105	82389106	chr10:82389106:C:T	rs4035093	C	T	C	Sox2_MA0143.3	20	0	+	0	0	.
chr10	82415375	82415376	chr10:82415376:G:A	rs73306166	G	A	A	Sox2_MA0143.3	22	0	-	0	0	.
chr10	82420219	82420220	chr10:82420220:A:G	rs17100053	A	G	A	Sox2_MA0143.3	26	0	+	0	0	.
chr10	82465439	82465440	chr10:82465440:G:A	rs146354870	G	A	C	Sox2_MA0143.3	11	0	+	0	0	.
chr10	82582372	82582373	chr10:82582373:A:G	rs643421	A	G	A	Sox2_MA0143.3	-3	0	-	0	0	.
chr10	82652173	82652174	chr10:82652174:C:T	rs74146150	C	T	C	Sox2_MA0143.3	0	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr10	82671672	82671673	chr10:82671673:G:A	rs72829364	G	A	G	Sox2_MA0143.3	12	0	+	0	0	.
chr10	82736447	82736448	chr10:82736448:G:A	rs2644205	G	A	G	Sox2_MA0143.3	15	0	-	0	0	.
chr10	82737603	82737604	chr10:82737604:A:G	rs17682831	A	G	A	Sox2_MA0143.3	3	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr10	82942765	82942766	chr10:82942766:C:G	rs149315431	C	G	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr10	83007171	83007172	chr10:83007172:T:C	rs1923553	T	C	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr10	83013320	83013321	chr10:83013321:T:C	rs7906345	T	C	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr10	83073666	83073667	chr10:83073667:G:C	rs4294518	G	C	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr10	83157973	83157974	chr10:83157974:T:A	rs4933889	T	A	T	Sox2_MA0143.3	-7	0	-	0	0	.
chr10	83517738	83517739	chr10:83517739:G:A	rs4933924	G	A	G	Sox2_MA0143.3	24	0	-	0	0	.
chr10	83517752	83517753	chr10:83517753:C:A	rs1324251	C	A	C	Sox2_MA0143.3	10	0	-	0	0	.
chr10	83523406	83523407	chr10:83523407:G:A	rs79452005	G	A	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr10	83526656	83526657	chr10:83526657:T:C	rs915495	T	C	C	Sox2_MA0143.3	11	0	-	0	0	.
chr10	83539433	83539434	chr10:83539434:T:C	rs1408357	T	C	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr10	83633006	83633007	chr10:83633007:G:A	rs12221180	G	A	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr10	83678325	83678326	chr10:83678326:C:T	rs11199923	C	T	C	Sox2_MA0143.3	14	0	-	0	0	.
chr10	83704232	83704233	chr10:83704233:T:C	rs871956	T	C	T	Sox2_MA0143.3	-1	0	+	0	0	.
chr10	83769675	83769676	chr10:83769676:A:T	rs506621	A	T	T	Sox2_MA0143.3	20	0	-	0	0	.
chr10	83818614	83818615	chr10:83818615:A:C	rs76475667	A	C	A	Sox2_MA0143.3	-18	0	+	0	0	.
chr10	83868082	83868083	chr10:83868083:A:T	rs12240734	A	T	T	Sox2_MA0143.3	-13	0	+	0	0	.
chr10	84027052	84027053	chr10:84027053:T:A	rs10788307	T	A	A	Sox2_MA0143.3	-18	0	-	0	0	.
chr10	84027054	84027055	chr10:84027055:G:C	rs115282097	G	C	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr10	84146345	84146346	chr10:84146346:T:A	rs12412411	T	A	T	Sox2_MA0143.3	-13	0	+	0	0	.
chr10	84189495	84189496	chr10:84189496:G:C	rs12267366	G	C	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr10	84194665	84194666	chr10:84194666:T:C	chr10:84194666:T:C	T	C	T	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr10	84201210	84201211	chr10:84201211:C:G	rs74145717	C	G	G	Sox2_MA0143.3	0	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr10	84214754	84214755	chr10:84214755:C:T	rs41291356	C	T	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr10	84251986	84251987	chr10:84251987:G:T	rs17103281	G	T	G	Sox2_MA0143.3	23	0	-	0	0	.
chr10	84270810	84270811	chr10:84270811:A:G	rs12569977	A	G	A	Sox2_MA0143.3	-18	0	+	0	0	.
chr10	84374888	84374889	chr10:84374889:T:C	rs181441926	T	C	T	Sox2_MA0143.3	-10	0	+	0	0	.
chr10	84392254	84392255	chr10:84392255:G:C	rs2960	G	C	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr10	84452374	84452375	chr10:84452375:G:C	rs7088904	G	C	G	Sox2_MA0143.3	-5	0	+	0	0	.
chr10	84525642	84525643	chr10:84525643:G:A	rs7893839	G	A	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr10	84527427	84527428	chr10:84527428:G:A	rs112133737	G	A	G	Sox2_MA0143.3	5	1	+	9.206767037375712	2.298012258060492	CCTTTGTC
chr10	84535674	84535675	chr10:84535675:C:A	rs12416126	C	A	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr10	84585321	84585322	chr10:84585322:A:G	rs2505768	A	G	G	Sox2_MA0143.3	13	0	-	0	0	.
chr10	84812529	84812530	chr10:84812530:G:A	rs55684809	G	A	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr10	85043349	85043350	chr10:85043350:C:T	rs17293684	C	T	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr10	85148864	85148865	chr10:85148865:C:G	rs11201412	C	G	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr10	85318049	85318050	chr10:85318050:C:T	rs7905269	C	T	C	Sox2_MA0143.3	27	0	+	0	0	.
chr10	85614805	85614806	chr10:85614806:C:T	rs145223482	C	T	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr10	85676590	85676591	chr10:85676591:C:T	rs12255557	C	T	C	Sox2_MA0143.3	10	0	-	0	0	.
chr10	85888172	85888173	chr10:85888173:G:A	rs79210395	G	A	g	Sox2_MA0143.3	20	0	+	0	0	.
chr10	85901757	85901758	chr10:85901758:C:G	rs77508767	C	G	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr10	85955889	85955890	chr10:85955890:G:C	rs77898808	G	C	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr10	86038744	86038745	chr10:86038745:C:T	rs12765150	C	T	T	Sox2_MA0143.3	11	0	+	0	0	.
chr10	86063344	86063345	chr10:86063345:G:A	rs17106242	G	A	G	Sox2_MA0143.3	16	0	-	0	0	.
chr10	86111869	86111870	chr10:86111870:G:A	rs4284352	G	A	G	Sox2_MA0143.3	20	0	+	0	0	.
chr10	86189874	86189875	chr10:86189875:T:C	rs77578102	T	C	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr10	86254692	86254693	chr10:86254693:T:C	rs189579884	T	C	T	Sox2_MA0143.3	-15	0	-	0	0	.
chr10	86262246	86262247	chr10:86262247:G:C	rs144483650	G	C	G	Sox2_MA0143.3	8	0	-	0	0	.
chr10	86270991	86270992	chr10:86270992:G:C	rs75834654	G	C	G	Sox2_MA0143.3	9	0	-	0	0	.
chr10	86297901	86297902	chr10:86297902:A:G	rs7094105	A	G	A	Sox2_MA0143.3	6	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr10	86306881	86306882	chr10:86306882:T:C	rs73338239	T	C	T	Sox2_MA0143.3	6	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr10	86336289	86336290	chr10:86336290:G:C	rs10887578	G	C	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr10	86423823	86423824	chr10:86423824:A:C	chr10:86423824:A:C	A	C	a	Sox2_MA0143.3	-10	0	+	0	0	.
chr10	86423830	86423831	chr10:86423831:T:A	chr10:86423831:T:A	T	A	t	Sox2_MA0143.3	-3	0	+	0	0	.
chr10	86443144	86443145	chr10:86443145:C:A	rs17331221	C	A	C	Sox2_MA0143.3	1	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr10	86585802	86585803	chr10:86585803:A:C	chr10:86585803:A:C	A	C	A	Sox2_MA0143.3	-10	0	+	0	0	.
chr10	86591112	86591113	chr10:86591113:A:T	rs2691072	A	T	T	Sox2_MA0143.3	15	0	+	0	0	.
chr10	86600474	86600475	chr10:86600475:C:T	rs56211920	C	T	c	Sox2_MA0143.3	-7	0	+	0	0	.
chr10	86612195	86612196	chr10:86612196:A:G	rs2803586	A	G	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr10	86658925	86658926	chr10:86658926:C:T	rs2014084	C	T	T	Sox2_MA0143.3	-10	0	-	0	0	.
chr10	86668636	86668637	chr10:86668637:C:A	rs34972863	C	A	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr10	86700402	86700403	chr10:86700403:A:G	rs11202131	A	G	A	Sox2_MA0143.3	26	0	+	0	0	.
chr10	86857306	86857307	chr10:86857307:G:C	rs79185803	G	C	G	Sox2_MA0143.3	13	0	-	0	0	.
chr10	86901441	86901442	chr10:86901442:C:G	rs7905807	C	G	G	Sox2_MA0143.3	13	0	-	0	0	.
chr10	86941134	86941135	chr10:86941135:G:T	rs78594290	G	T	G	Sox2_MA0143.3	8	0	+	0	0	.
chr10	86958218	86958219	chr10:86958219:C:T	rs74150416	C	T	C	Sox2_MA0143.3	21	0	-	0	0	.
chr10	86966130	86966131	chr10:86966131:C:A	rs115225829	C	A	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr10	87053495	87053496	chr10:87053496:C:A	rs17107324	C	A	c	Sox2_MA0143.3	-18	0	-	0	0	.
chr10	87093110	87093111	chr10:87093111:C:A	chr10:87093111:C:A	C	A	C	Sox2_MA0143.3	0	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr10	87404436	87404437	chr10:87404437:A:G	rs12251529	A	G	A	Sox2_MA0143.3	16	0	-	0	0	.
chr10	87505308	87505309	chr10:87505309:G:T	chr10:87505309:G:T	G	T	G	Sox2_MA0143.3	-9	0	+	0	0	.
chr10	87640034	87640035	chr10:87640035:T:A	rs4933451	T	A	A	Sox2_MA0143.3	14	0	+	0	0	.
chr10	87684609	87684610	chr10:87684610:G:A	rs12781358	G	A	g	Sox2_MA0143.3	-8	0	+	0	0	.
chr10	87686174	87686175	chr10:87686175:G:A	rs12265003	G	A	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr10	88100670	88100671	chr10:88100671:G:C	rs7914010	G	C	G	Sox2_MA0143.3	7	1	+	8.864090315184848	9.206767037375712	CCTTTGTG
chr10	88114016	88114017	chr10:88114017:C:T	rs113930464	C	T	C	Sox2_MA0143.3	16	0	+	0	0	.
chr10	88245290	88245291	chr10:88245291:C:T	rs11202691	C	T	C	Sox2_MA0143.3	0	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr10	88255643	88255644	chr10:88255644:C:T	rs955033	C	T	T	Sox2_MA0143.3	26	0	-	0	0	.
chr10	88281536	88281537	chr10:88281537:G:A	rs2872068	G	A	A	Sox2_MA0143.3	16	0	+	0	0	.
chr10	88546618	88546619	chr10:88546619:C:T	rs12249510	C	T	C	Sox2_MA0143.3	14	0	-	0	0	.
chr10	88693933	88693934	chr10:88693934:A:C	rs11202817	A	C	C	Sox2_MA0143.3	4	1	-	8.864090315184848	1.9553355358696274	CCTTTGTG
chr10	88900135	88900136	chr10:88900136:T:C	rs17114024	T	C	T	Sox2_MA0143.3	-12	0	-	0	0	.
chr10	88915559	88915560	chr10:88915560:G:A	rs1561742	G	A	A	Sox2_MA0143.3	-19	0	+	0	0	.
chr10	89116284	89116285	chr10:89116285:T:C	rs72812823	T	C	T	Sox2_MA0143.3	-17	0	-	0	0	.
chr10	89171844	89171845	chr10:89171845:T:C	rs7902290	T	C	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr10	89172286	89172287	chr10:89172287:C:T	rs575147047	C	T	C	Sox2_MA0143.3	1	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr10	89225232	89225233	chr10:89225233:G:A	rs2297472	G	A	G	Sox2_MA0143.3	10	0	-	0	0	.
chr10	89225305	89225306	chr10:89225306:G:C	rs1050297797	G	C	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr10	89234141	89234142	chr10:89234142:G:A	rs61853098	G	A	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr10	89278006	89278007	chr10:89278007:G:A	rs41284122	G	A	G	Sox2_MA0143.3	5	1	+	8.676919043985553	1.7681642646703324	CCATTGTG
chr10	89297600	89297601	chr10:89297601:C:T	rs61853125	C	T	C	Sox2_MA0143.3	14	0	-	0	0	.
chr10	89394321	89394322	chr10:89394322:T:C	rs11203106	T	C	T	Sox2_MA0143.3	24	0	+	0	0	.
chr10	89402919	89402920	chr10:89402920:C:T	rs303210	C	T	C	Sox2_MA0143.3	5	1	-	9.019595766176417	2.110840986861197	CCATTGTC
chr10	89404412	89404413	chr10:89404413:T:C	rs215493	T	C	C	Sox2_MA0143.3	19	0	+	0	0	.
chr10	89473746	89473747	chr10:89473747:A:G	rs992759	A	G	A	Sox2_MA0143.3	14	0	+	0	0	.
chr10	89536446	89536447	chr10:89536447:C:T	rs77097927	C	T	C	Sox2_MA0143.3	-12	0	-	0	0	.
chr10	89556769	89556770	chr10:89556770:A:G	rs116562477	A	G	A	Sox2_MA0143.3	10	0	+	0	0	.
chr10	89701148	89701149	chr10:89701149:A:C	rs111997529	A	C	A	Sox2_MA0143.3	-15	0	-	0	0	.
chr10	89701631	89701632	chr10:89701632:A:G	rs114227809	A	G	A	Sox2_MA0143.3	24	0	+	0	0	.
chr10	89829523	89829524	chr10:89829524:T:G	rs2026555	T	G	G	Sox2_MA0143.3	10	0	-	0	0	.
chr10	89837780	89837781	chr10:89837781:T:G	chr10:89837781:T:G	T	G	T	Sox2_MA0143.3	25	0	+	0	0	.
chr10	89887998	89887999	chr10:89887999:A:G	rs1886412	A	G	A	Sox2_MA0143.3	-4	0	+	0	0	.
chr10	90031698	90031699	chr10:90031699:C:A	rs2419351	C	A	A	Sox2_MA0143.3	11	0	-	0	0	.
chr10	90086064	90086065	chr10:90086065:A:G	rs7095153	A	G	-	Sox2_MA0143.3	-4	0	+	0	0	.
chr10	90139108	90139109	chr10:90139109:A:C	rs2182237	A	C	C	Sox2_MA0143.3	26	0	-	0	0	.
chr10	90278803	90278804	chr10:90278804:C:G	rs1326846	C	G	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr10	90317516	90317517	chr10:90317517:C:A	rs11186122	C	A	A	Sox2_MA0143.3	-1	0	-	0	0	.
chr10	90323257	90323258	chr10:90323258:G:A	rs1326163	G	A	A	Sox2_MA0143.3	11	0	+	0	0	.
chr10	90441070	90441071	chr10:90441071:C:T	rs78162540	C	T	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr10	90453234	90453235	chr10:90453235:C:A	rs2487780	C	A	A	Sox2_MA0143.3	-6	0	-	0	0	.
chr10	90470665	90470666	chr10:90470666:T:A	rs2901027	T	A	T	Sox2_MA0143.3	-12	0	+	0	0	.
chr10	90562561	90562562	chr10:90562562:A:G	rs11186227	A	G	A	Sox2_MA0143.3	-1	0	-	0	0	.
chr10	90614857	90614858	chr10:90614858:G:A	rs1573252	G	A	A	Sox2_MA0143.3	16	0	-	0	0	.
chr10	90816632	90816633	chr10:90816633:T:C	rs11813096	T	C	T	Sox2_MA0143.3	3	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr10	90822669	90822670	chr10:90822670:T:C	rs66795651	T	C	T	Sox2_MA0143.3	2	1	-	9.019595766176417	2.900948058900136	CCATTGTC
chr10	90906079	90906080	chr10:90906080:T:G	rs41286918	T	G	T	Sox2_MA0143.3	-6	0	+	0	0	.
chr10	90911992	90911993	chr10:90911993:C:G	chr10:90911993:C:G	C	G	C	Sox2_MA0143.3	27	0	-	0	0	.
chr10	90961899	90961900	chr10:90961900:T:G	rs7067705	T	G	G	Sox2_MA0143.3	15	0	-	0	0	.
chr10	90970474	90970475	chr10:90970475:C:T	rs11597992	C	T	C	Sox2_MA0143.3	10	0	-	0	0	.
chr10	90970490	90970491	chr10:90970491:C:A	rs7088999	C	A	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr10	90982964	90982965	chr10:90982965:C:T	rs7099639	C	T	T	Sox2_MA0143.3	27	0	+	0	0	.
chr10	90999180	90999181	chr10:90999181:A:T	rs61857869	A	T	A	Sox2_MA0143.3	-1	0	-	0	0	.
chr10	91035983	91035984	chr10:91035984:A:G	rs3892722	A	G	A	Sox2_MA0143.3	13	0	+	0	0	.
chr10	91036053	91036054	chr10:91036054:T:C	rs2002552	T	C	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr10	91048506	91048507	chr10:91048507:T:C	rs2066426	T	C	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr10	91089053	91089054	chr10:91089054:C:T	rs1870189	C	T	T	Sox2_MA0143.3	-8	0	-	0	0	.
chr10	91089062	91089063	chr10:91089063:T:C	rs1870190	T	C	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr10	91284695	91284696	chr10:91284696:G:A	rs181579242	G	A	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr10	91476811	91476812	chr10:91476812:C:T	rs72819217	C	T	C	Sox2_MA0143.3	1	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr10	91587948	91587949	chr10:91587949:T:C	rs12573462	T	C	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr10	91589263	91589264	chr10:91589264:G:A	rs72821229	G	A	G	Sox2_MA0143.3	27	0	-	0	0	.
chr10	91637256	91637257	chr10:91637257:A:G	rs11186638	A	G	A	Sox2_MA0143.3	3	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr10	91684251	91684252	chr10:91684252:G:A	rs7094498	G	A	G	Sox2_MA0143.3	24	0	-	0	0	.
chr10	91684270	91684271	chr10:91684271:C:A	rs112422513	C	A	C	Sox2_MA0143.3	5	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr10	91689723	91689724	chr10:91689724:G:A	rs72821302	G	A	G	Sox2_MA0143.3	22	0	+	0	0	.
chr10	91711671	91711672	chr10:91711672:T:C	rs185221634	T	C	T	Sox2_MA0143.3	-1	0	-	0	0	.
chr10	92291158	92291159	chr10:92291159:C:T	rs546704624	C	T	c	Sox2_MA0143.3	19	0	-	0	0	.
chr10	92291190	92291191	chr10:92291191:C:T	rs1382306142	C	T	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr10	92329514	92329515	chr10:92329515:C:G	rs73318084	C	G	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr10	92387265	92387266	chr10:92387266:C:T	rs2259471	C	T	c	Sox2_MA0143.3	-6	0	-	0	0	.
chr10	92397653	92397654	chr10:92397654:C:G	rs11186973	C	G	C	Sox2_MA0143.3	11	0	+	0	0	.
chr10	92588072	92588073	chr10:92588073:G:A	rs6583826	G	A	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr10	92712436	92712437	chr10:92712437:A:G	rs750074050	A	G	A	Sox2_MA0143.3	19	0	+	0	0	.
chr10	92732958	92732959	chr10:92732959:C:T	rs2497304	C	T	C	Sox2_MA0143.3	26	0	-	0	0	.
chr10	92812267	92812268	chr10:92812268:C:G	rs189756130	C	G	C	Sox2_MA0143.3	26	0	+	0	0	.
chr10	92837179	92837180	chr10:92837180:A:G	chr10:92837180:A:G	A	G	A	Sox2_MA0143.3	-13	0	+	0	0	.
chr10	92892091	92892092	chr10:92892092:C:T	rs10786056	C	T	C	Sox2_MA0143.3	-5	0	-	0	0	.
chr10	92916678	92916679	chr10:92916679:C:T	rs10786061	C	T	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr10	93002582	93002583	chr10:93002583:G:A	rs1409386	G	A	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr10	93081686	93081687	chr10:93081687:A:G	rs76851326	A	G	A	Sox2_MA0143.3	19	0	+	0	0	.
chr10	93106532	93106533	chr10:93106533:C:T	rs2149108	C	T	C	Sox2_MA0143.3	8	0	+	0	0	.
chr10	93116519	93116520	chr10:93116520:G:C	rs376789697	G	C	G	Sox2_MA0143.3	-11	0	+	0	0	.
chr10	93126120	93126121	chr10:93126121:T:C	rs34073388	T	C	T	Sox2_MA0143.3	16	0	-	0	0	.
chr10	93215427	93215428	chr10:93215428:C:T	rs12217975	C	T	C	Sox2_MA0143.3	25	0	+	0	0	.
chr10	93253209	93253210	chr10:93253210:C:T	rs34887972	C	T	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr10	93318146	93318147	chr10:93318147:C:T	rs114773477	C	T	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr10	93437095	93437096	chr10:93437096:A:G	rs2140553	A	G	A	Sox2_MA0143.3	17	0	+	0	0	.
chr10	93438647	93438648	chr10:93438648:A:G	rs561883013	A	G	A	Sox2_MA0143.3	-19	0	-	0	0	.
chr10	93479363	93479364	chr10:93479364:C:T	rs4989680	C	T	C	Sox2_MA0143.3	17	0	+	0	0	.
chr10	93481579	93481580	chr10:93481580:T:C	rs1829930	T	C	C	Sox2_MA0143.3	24	0	-	0	0	.
chr10	93788622	93788623	chr10:93788623:T:C	rs10882335	T	C	C	Sox2_MA0143.3	12	0	-	0	0	.
chr10	93907268	93907269	chr10:93907269:T:C	rs2113956	T	C	T	Sox2_MA0143.3	-6	0	+	0	0	.
chr10	94050174	94050175	chr10:94050175:G:C	rs11187778	G	C	G	Sox2_MA0143.3	26	0	-	0	0	.
chr10	94198573	94198574	chr10:94198574:C:T	rs4545470	C	T	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr10	94242130	94242131	chr10:94242131:A:G	rs17109872	A	G	A	Sox2_MA0143.3	17	0	+	0	0	.
chr10	94623683	94623684	chr10:94623684:C:T	rs1385265085	C	T	c	Sox2_MA0143.3	14	0	+	0	0	.
chr10	94687943	94687944	chr10:94687944:T:C	rs576478468	T	C	-	Sox2_MA0143.3	-17	0	-	0	0	.
chr10	94892562	94892563	chr10:94892563:G:A	rs35013847	G	A	a	Sox2_MA0143.3	9	0	-	0	0	.
chr10	94898751	94898752	chr10:94898752:T:A	rs7895726	T	A	A	Sox2_MA0143.3	9	0	+	0	0	.
chr10	95122744	95122745	chr10:95122745:A:G	rs7921561	A	G	A	Sox2_MA0143.3	2	1	+	9.613475778572903	3.494828071296623	CCATTGTT
chr10	95305971	95305972	chr10:95305972:C:T	rs1427095895	C	T	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr10	95310324	95310325	chr10:95310325:T:C	rs7068868	T	C	C	Sox2_MA0143.3	20	0	-	0	0	.
chr10	95324704	95324705	chr10:95324705:C:T	rs74699804	C	T	C	Sox2_MA0143.3	12	0	-	0	0	.
chr10	95336020	95336021	chr10:95336021:A:G	rs3850692	A	G	G	Sox2_MA0143.3	12	0	+	0	0	.
chr10	95387461	95387462	chr10:95387462:A:G	rs12219964	A	G	A	Sox2_MA0143.3	7	1	-	9.613475778572903	9.019595766176417	CCATTGTT
chr10	95508652	95508653	chr10:95508653:G:C	rs72824561	G	C	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr10	95508894	95508895	chr10:95508895:A:C	rs72824564	A	C	A	Sox2_MA0143.3	12	0	-	0	0	.
chr10	95540011	95540012	chr10:95540012:T:A	rs4244317	T	A	A	Sox2_MA0143.3	19	0	+	0	0	.
chr10	95552747	95552748	chr10:95552748:A:G	rs7092277	A	G	G	Sox2_MA0143.3	17	0	-	0	0	.
chr10	95561231	95561232	chr10:95561232:G:A	rs540511765	G	A	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr10	95568238	95568239	chr10:95568239:C:T	rs146274396	C	T	C	Sox2_MA0143.3	8	0	-	0	0	.
chr10	95568253	95568254	chr10:95568254:C:G	rs10882622	C	G	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr10	95687494	95687495	chr10:95687495:G:A	rs41302727	G	A	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr10	96005450	96005451	chr10:96005451:A:G	rs117561824	A	G	A	Sox2_MA0143.3	-6	0	+	0	0	.
chr10	96043578	96043579	chr10:96043579:C:T	rs190391349	C	T	C	Sox2_MA0143.3	11	0	-	0	0	.
chr10	96072760	96072761	chr10:96072761:T:C	rs4918986	T	C	G	Sox2_MA0143.3	27	0	-	0	0	.
chr10	96222555	96222556	chr10:96222556:G:A	rs587603510	G	A	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr10	96336080	96336081	chr10:96336081:C:T	rs17111707	C	T	T	Sox2_MA0143.3	7	1	+	9.206767037375712	9.800647049772198	CCTTTGTC
chr10	96370920	96370921	chr10:96370921:G:A	rs79505129	G	A	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr10	96408801	96408802	chr10:96408802:A:G	rs7918541	A	G	G	Sox2_MA0143.3	25	0	+	0	0	.
chr10	96453862	96453863	chr10:96453863:A:G	rs4623825	A	G	A	Sox2_MA0143.3	24	0	+	0	0	.
chr10	96556165	96556166	chr10:96556166:G:C	rs11598142	G	C	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr10	96607510	96607511	chr10:96607511:T:C	rs912486	T	C	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr10	96615242	96615243	chr10:96615243:A:C	rs10736114	A	C	T	Sox2_MA0143.3	3	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr10	96748279	96748280	chr10:96748280:A:C	rs7899808	A	C	A	Sox2_MA0143.3	23	0	-	0	0	.
chr10	96748292	96748293	chr10:96748293:C:A	rs61856845	C	A	C	Sox2_MA0143.3	10	0	-	0	0	.
chr10	96748293	96748294	chr10:96748294:G:A	rs74380963	G	A	G	Sox2_MA0143.3	9	0	-	0	0	.
chr10	97053613	97053614	chr10:97053614:A:C	rs12269131	A	C	A	Sox2_MA0143.3	-3	0	-	0	0	.
chr10	97147467	97147468	chr10:97147468:A:G	rs80350117	A	G	A	Sox2_MA0143.3	-3	0	-	0	0	.
chr10	97147655	97147656	chr10:97147656:G:C	rs2784932	G	C	G	Sox2_MA0143.3	7	1	+	8.864090315184848	9.206767037375712	CCTTTGTG
chr10	97158227	97158228	chr10:97158228:T:C	rs17112469	T	C	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr10	97169987	97169988	chr10:97169988:C:T	rs2784914	C	T	C	Sox2_MA0143.3	10	0	+	0	0	.
chr10	97267904	97267905	chr10:97267905:T:C	rs1460564534	T	C	T	Sox2_MA0143.3	7	1	-	3.5547341015215945	8.864090315184848	CCTTTGTA
chr10	97267923	97267924	chr10:97267924:T:C	rs11189081	T	C	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr10	97267961	97267962	chr10:97267962:T:A	rs11189082	T	A	T	Sox2_MA0143.3	21	0	+	0	0	.
chr10	97291193	97291194	chr10:97291194:A:C	rs117610335	A	C	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr10	97319243	97319244	chr10:97319244:A:G	rs1028872290	A	G	A	Sox2_MA0143.3	9	0	+	0	0	.
chr10	97350035	97350036	chr10:97350036:C:T	rs145572433	C	T	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr10	97362420	97362421	chr10:97362421:T:C	rs17112674	T	C	C	Sox2_MA0143.3	2	1	-	8.676919043985553	2.5582713367092715	CCATTGTG
chr10	97365217	97365218	chr10:97365218:G:A	rs7918948	G	A	G	Sox2_MA0143.3	23	0	-	0	0	.
chr10	97383190	97383191	chr10:97383191:A:C	rs6584127	A	C	C	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr10	97465980	97465981	chr10:97465981:T:A	rs2236575	T	A	T	Sox2_MA0143.3	-2	0	-	0	0	.
chr10	97483791	97483792	chr10:97483792:C:G	rs143789502	C	G	C	Sox2_MA0143.3	5	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr10	97594661	97594662	chr10:97594662:T:A	rs7072032	T	A	A	Sox2_MA0143.3	24	0	+	0	0	.
chr10	97606532	97606533	chr10:97606533:G:A	rs11189292	G	A	G	Sox2_MA0143.3	-5	0	+	0	0	.
chr10	97616334	97616335	chr10:97616335:T:C	rs3814555	T	C	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr10	97689879	97689880	chr10:97689880:A:G	rs182912314	A	G	A	Sox2_MA0143.3	-17	0	-	0	0	.
chr10	97689880	97689881	chr10:97689881:C:G	rs143403186	C	G	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr10	97735820	97735821	chr10:97735821:A:G	rs10786367	A	G	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr10	97839867	97839868	chr10:97839868:C:T	rs189863882	C	T	C	Sox2_MA0143.3	0	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr10	97905566	97905567	chr10:97905567:G:T	rs111897630	G	T	G	Sox2_MA0143.3	16	0	+	0	0	.
chr10	97921925	97921926	chr10:97921926:T:C	rs76628883	T	C	T	Sox2_MA0143.3	-5	0	+	0	0	.
chr10	97922792	97922793	chr10:97922793:T:C	rs3844064	T	C	T	Sox2_MA0143.3	-13	0	+	0	0	.
chr10	98012432	98012433	chr10:98012433:T:C	rs565108	T	C	C	Sox2_MA0143.3	9	0	-	0	0	.
chr10	98168203	98168204	chr10:98168204:G:C	rs4919180	G	C	C	Sox2_MA0143.3	5	1	+	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr10	98266058	98266059	chr10:98266059:G:A	rs10748723	G	A	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr10	98392086	98392087	chr10:98392087:T:C	rs7082192	T	C	C	Sox2_MA0143.3	25	0	-	0	0	.
chr10	98409707	98409708	chr10:98409708:C:T	rs7923729	C	T	C	Sox2_MA0143.3	17	0	+	0	0	.
chr10	98409714	98409715	chr10:98409715:C:T	rs9804285	C	T	C	Sox2_MA0143.3	24	0	+	0	0	.
chr10	98568499	98568500	chr10:98568500:T:C	rs671210	T	C	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr10	98599128	98599129	chr10:98599129:C:T	rs11189705	C	T	C	Sox2_MA0143.3	19	0	-	0	0	.
chr10	98608717	98608718	chr10:98608718:A:G	rs74154332	A	G	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr10	98832418	98832419	chr10:98832419:A:G	rs837727	A	G	G	Sox2_MA0143.3	26	0	-	0	0	.
chr10	98924937	98924938	chr10:98924938:C:T	rs1418255	C	T	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr10	98973499	98973500	chr10:98973500:C:A	rs10883234	C	A	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr10	99304612	99304613	chr10:99304613:A:G	rs539779502	A	G	A	Sox2_MA0143.3	-3	0	-	0	0	.
chr10	99337474	99337475	chr10:99337475:T:G	rs7914148	T	G	C	Sox2_MA0143.3	20	0	+	0	0	.
chr10	99521400	99521401	chr10:99521401:C:G	rs10883360	C	G	C	Sox2_MA0143.3	17	0	+	0	0	.
chr10	99535585	99535586	chr10:99535586:C:T	rs549773276	C	T	c	Sox2_MA0143.3	-11	0	+	0	0	.
chr10	99612285	99612286	chr10:99612286:G:A	rs888209	G	A	A	Sox2_MA0143.3	-3	0	-	0	0	.
chr10	99626942	99626943	chr10:99626943:T:A	rs1477144	T	A	t	Sox2_MA0143.3	14	0	+	0	0	.
chr10	99714741	99714742	chr10:99714742:T:C	rs11190255	T	C	T	Sox2_MA0143.3	-12	0	-	0	0	.
chr10	99787567	99787568	chr10:99787568:C:T	rs10748791	C	T	C	Sox2_MA0143.3	24	0	+	0	0	.
chr10	99787570	99787571	chr10:99787571:C:T	rs10748792	C	T	C	Sox2_MA0143.3	27	0	+	0	0	.
chr10	99851235	99851236	chr10:99851236:C:A	rs74923203	C	A	C	Sox2_MA0143.3	10	0	+	0	0	.
chr10	99873157	99873158	chr10:99873158:C:T	rs11190302	C	T	T	Sox2_MA0143.3	22	0	+	0	0	.
chr10	99994399	99994400	chr10:99994400:T:G	rs866862229	T	G	T	Sox2_MA0143.3	-5	0	-	0	0	.
chr10	100167709	100167710	chr10:100167710:C:G	rs187239919	C	G	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr10	100167710	100167711	chr10:100167711:G:A	rs11190408	G	A	G	Sox2_MA0143.3	-3	0	-	0	0	.
chr10	100307918	100307919	chr10:100307919:T:C	rs73341812	T	C	T	Sox2_MA0143.3	24	0	+	0	0	.
chr10	100338590	100338591	chr10:100338591:G:A	rs115710993	G	A	G	Sox2_MA0143.3	16	0	-	0	0	.
chr10	100346583	100346584	chr10:100346584:G:A	chr10:100346584:G:A	G	A	G	Sox2_MA0143.3	-3	0	+	0	0	.
chr10	100346609	100346610	chr10:100346610:T:C	rs670213	T	C	C	Sox2_MA0143.3	23	0	+	0	0	.
chr10	100351288	100351289	chr10:100351289:A:G	rs681278	A	G	A	Sox2_MA0143.3	3	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr10	100355249	100355250	chr10:100355250:G:A	rs3829160	G	A	G	Sox2_MA0143.3	9	0	-	0	0	.
chr10	100359242	100359243	chr10:100359243:C:T	rs55710213	C	T	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr10	100359244	100359245	chr10:100359245:C:T	rs56334587	C	T	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr10	100486367	100486368	chr10:100486368:T:C	rs9419897	T	C	C	Sox2_MA0143.3	24	0	+	0	0	.
chr10	100506977	100506978	chr10:100506978:A:C	rs7080356	A	C	C	Sox2_MA0143.3	18	0	-	0	0	.
chr10	100509424	100509425	chr10:100509425:A:C	rs74562800	A	C	A	Sox2_MA0143.3	-6	0	+	0	0	.
chr10	100509448	100509449	chr10:100509449:A:G	rs3763695	A	G	G	Sox2_MA0143.3	18	0	+	0	0	.
chr10	100532171	100532172	chr10:100532172:G:A	rs191811134	G	A	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr10	100602720	100602721	chr10:100602721:G:A	rs565841653	G	A	G	Sox2_MA0143.3	9	0	+	0	0	.
chr10	100621376	100621377	chr10:100621377:C:A	rs75984076	C	A	C	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr10	100621878	100621879	chr10:100621879:A:G	rs10883514	A	G	A	Sox2_MA0143.3	21	0	-	0	0	.
chr10	100744443	100744444	chr10:100744444:G:T	rs6584397	G	T	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr10	100900015	100900016	chr10:100900016:G:T	rs10786613	G	T	G	Sox2_MA0143.3	25	0	+	0	0	.
chr10	100912164	100912165	chr10:100912165:C:T	rs193022281	C	T	C	Sox2_MA0143.3	26	0	-	0	0	.
chr10	101148664	101148665	chr10:101148665:G:A	rs17365591	G	A	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr10	101158622	101158623	chr10:101158623:A:G	rs11190853	A	G	G	Sox2_MA0143.3	11	0	+	0	0	.
chr10	101219797	101219798	chr10:101219798:C:T	rs35999315	C	T	C	Sox2_MA0143.3	25	0	+	0	0	.
chr10	101263255	101263256	chr10:101263256:T:C	rs12268851	T	C	T	Sox2_MA0143.3	26	0	-	0	0	.
chr10	101555420	101555421	chr10:101555421:G:A	rs4919552	G	A	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr10	101616632	101616633	chr10:101616633:G:A	rs1054124381	G	A	G	Sox2_MA0143.3	17	0	-	0	0	.
chr10	101624888	101624889	chr10:101624889:G:A	rs1010785571	G	A	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr10	101630209	101630210	chr10:101630210:C:T	rs117124546	C	T	C	Sox2_MA0143.3	-5	0	-	0	0	.
chr10	101727613	101727614	chr10:101727614:C:T	rs17114177	C	T	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr10	101798988	101798989	chr10:101798989:G:C	rs114282663	G	C	G	Sox2_MA0143.3	26	0	-	0	0	.
chr10	101907128	101907129	chr10:101907129:C:A	rs10509753	C	A	C	Sox2_MA0143.3	22	0	-	0	0	.
chr10	101995616	101995617	chr10:101995617:A:G	rs72844686	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr10	102118016	102118017	chr10:102118017:C:G	rs35366855	C	G	c	Sox2_MA0143.3	-12	0	-	0	0	.
chr10	102246244	102246245	chr10:102246245:A:T	rs193125251	A	T	A	Sox2_MA0143.3	-13	0	-	0	0	.
chr10	102246248	102246249	chr10:102246249:A:G	rs115742798	A	G	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr10	102354570	102354571	chr10:102354571:T:C	rs3802681	T	C	C	Sox2_MA0143.3	23	0	+	0	0	.
chr10	102361802	102361803	chr10:102361803:T:C	rs755909292	T	C	T	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr10	102392171	102392172	chr10:102392172:C:T	chr10:102392172:C:T	C	T	c	Sox2_MA0143.3	27	0	+	0	0	.
chr10	102511545	102511546	chr10:102511546:G:A	rs10786671	G	A	A	Sox2_MA0143.3	26	0	+	0	0	.
chr10	102593350	102593351	chr10:102593351:A:G	rs193256295	A	G	A	Sox2_MA0143.3	-15	0	+	0	0	.
chr10	102596427	102596428	chr10:102596428:C:G	rs77799815	C	G	C	Sox2_MA0143.3	27	0	-	0	0	.
chr10	102596601	102596602	chr10:102596602:T:C	rs10786689	T	C	C	Sox2_MA0143.3	6	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr10	102596613	102596614	chr10:102596614:T:A	chr10:102596614:T:A	T	A	T	Sox2_MA0143.3	18	0	+	0	0	.
chr10	102604465	102604466	chr10:102604466:A:G	rs74854733	A	G	A	Sox2_MA0143.3	22	0	+	0	0	.
chr10	102652550	102652551	chr10:102652551:C:T	rs10786701	C	T	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr10	102697080	102697081	chr10:102697081:G:A	rs7904396	G	A	G	Sox2_MA0143.3	11	0	-	0	0	.
chr10	102714690	102714691	chr10:102714691:C:T	rs867693287	C	T	C	Sox2_MA0143.3	12	0	-	0	0	.
chr10	102743826	102743827	chr10:102743827:C:T	rs3818708	C	T	c	Sox2_MA0143.3	19	0	-	0	0	.
chr10	102773155	102773156	chr10:102773156:T:C	rs549466	T	C	T	Sox2_MA0143.3	23	0	+	0	0	.
chr10	102816094	102816095	chr10:102816095:C:T	rs14849	C	T	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr10	102816112	102816113	chr10:102816113:A:G	rs6892	A	G	A	Sox2_MA0143.3	12	0	+	0	0	.
chr10	102856905	102856906	chr10:102856906:T:C	rs4409766	T	C	t	Sox2_MA0143.3	19	0	+	0	0	.
chr10	102869707	102869708	chr10:102869708:T:G	rs3740400	T	G	G	Sox2_MA0143.3	14	0	+	0	0	.
chr10	103221409	103221410	chr10:103221410:C:G	rs10786747	C	G	C	Sox2_MA0143.3	1	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr10	103252137	103252138	chr10:103252138:C:T	rs3121271	C	T	C	Sox2_MA0143.3	8	0	+	0	0	.
chr10	103265753	103265754	chr10:103265754:A:G	rs1342031	A	G	A	Sox2_MA0143.3	21	0	+	0	0	.
chr10	103445598	103445599	chr10:103445599:C:T	rs3740478	C	T	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr10	103545243	103545244	chr10:103545244:G:T	rs72848971	G	T	G	Sox2_MA0143.3	21	0	+	0	0	.
chr10	103605531	103605532	chr10:103605532:C:G	rs3781363	C	G	C	Sox2_MA0143.3	16	0	+	0	0	.
chr10	103777730	103777731	chr10:103777731:C:G	rs140083339	C	G	C	Sox2_MA0143.3	0	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr10	103885966	103885967	chr10:103885967:A:G	rs6584579	A	G	A	Sox2_MA0143.3	4	1	-	8.864090315184848	1.9553355358696274	CCTTTGTG
chr10	103928963	103928964	chr10:103928964:T:A	rs7096400	T	A	A	Sox2_MA0143.3	4	1	+	9.206767037375712	2.2980122580604916	CCTTTGTC
chr10	104025740	104025741	chr10:104025741:G:A	rs182458142	G	A	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr10	104039457	104039458	chr10:104039458:G:T	rs2296219	G	T	G	Sox2_MA0143.3	14	0	+	0	0	.
chr10	104050641	104050642	chr10:104050642:T:C	rs805722	T	C	T	Sox2_MA0143.3	-5	0	+	0	0	.
chr10	104080966	104080967	chr10:104080967:A:G	rs529523219	A	G	A	Sox2_MA0143.3	-19	0	+	0	0	.
chr10	104099473	104099474	chr10:104099474:C:T	rs138484823	C	T	C	Sox2_MA0143.3	25	0	-	0	0	.
chr10	104150462	104150463	chr10:104150463:A:G	rs703333	A	G	G	Sox2_MA0143.3	22	0	+	0	0	.
chr10	104290556	104290557	chr10:104290557:T:C	rs11191989	T	C	T	Sox2_MA0143.3	-8	0	-	0	0	.
chr10	104306104	104306105	chr10:104306105:C:T	rs1043325010	C	T	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr10	104331336	104331337	chr10:104331337:G:A	rs276213	G	A	A	Sox2_MA0143.3	-9	0	-	0	0	.
chr10	104514615	104514616	chr10:104514616:T:C	rs4917415	T	C	T	Sox2_MA0143.3	24	0	+	0	0	.
chr10	104686656	104686657	chr10:104686657:T:C	rs915164	T	C	C	Sox2_MA0143.3	19	0	+	0	0	.
chr10	104809494	104809495	chr10:104809495:A:G	rs11192193	A	G	A	Sox2_MA0143.3	-3	0	+	0	0	.
chr10	104875851	104875852	chr10:104875852:T:A	rs4918135	T	A	T	Sox2_MA0143.3	-11	0	-	0	0	.
chr10	104880894	104880895	chr10:104880895:T:C	rs3001931	T	C	C	Sox2_MA0143.3	-12	0	-	0	0	.
chr10	104993206	104993207	chr10:104993207:T:C	rs78161238	T	C	T	Sox2_MA0143.3	-7	0	-	0	0	.
chr10	104993285	104993286	chr10:104993286:C:G	rs73351651	C	G	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr10	105097966	105097967	chr10:105097967:G:T	rs791118	G	T	T	Sox2_MA0143.3	27	0	+	0	0	.
chr10	105135437	105135438	chr10:105135438:G:A	rs4918150	G	A	A	Sox2_MA0143.3	19	0	+	0	0	.
chr10	105648118	105648119	chr10:105648119:A:T	rs918319	A	T	A	Sox2_MA0143.3	13	0	+	0	0	.
chr10	105798130	105798131	chr10:105798131:G:C	rs10509806	G	C	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr10	105973385	105973386	chr10:105973386:T:C	rs17238487	T	C	T	Sox2_MA0143.3	4	1	+	8.676919043985553	1.7681642646703322	CCATTGTG
chr10	105974224	105974225	chr10:105974225:T:G	rs12572674	T	G	T	Sox2_MA0143.3	3	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr10	106254259	106254260	chr10:106254260:C:A	rs11192804	C	A	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr10	107081862	107081863	chr10:107081863:T:C	rs77304155	T	C	T	Sox2_MA0143.3	-8	0	-	0	0	.
chr10	107276058	107276059	chr10:107276059:G:A	rs72818941	G	A	G	Sox2_MA0143.3	9	0	+	0	0	.
chr10	107408437	107408438	chr10:107408438:G:A	rs9651457	G	A	g	Sox2_MA0143.3	17	0	+	0	0	.
chr10	107546478	107546479	chr10:107546479:A:G	rs72825040	A	G	A	Sox2_MA0143.3	-20	0	-	0	0	.
chr10	107656810	107656811	chr10:107656811:G:A	rs12769098	G	A	G	Sox2_MA0143.3	13	0	+	0	0	.
chr10	107719211	107719212	chr10:107719212:T:C	rs2418971	T	C	C	Sox2_MA0143.3	6	1	+	9.613475778572903	2.7047209992576837	CCATTGTT
chr10	107749371	107749372	chr10:107749372:T:G	rs12774964	T	G	T	Sox2_MA0143.3	-20	0	+	0	0	.
chr10	107939863	107939864	chr10:107939864:T:G	rs12249894	T	G	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr10	108159175	108159176	chr10:108159176:T:G	rs11193927	T	G	T	Sox2_MA0143.3	25	0	+	0	0	.
chr10	108204023	108204024	chr10:108204024:T:C	rs7916234	T	C	T	Sox2_MA0143.3	9	0	-	0	0	.
chr10	108363095	108363096	chr10:108363096:G:A	rs10128286	G	A	A	Sox2_MA0143.3	-19	0	+	0	0	.
chr10	108363096	108363097	chr10:108363097:A:T	rs10128527	A	T	A	Sox2_MA0143.3	-18	0	+	0	0	.
chr10	108398410	108398411	chr10:108398411:C:T	rs1571505	C	T	C	Sox2_MA0143.3	17	0	-	0	0	.
chr10	108398447	108398448	chr10:108398448:G:A	rs1571506	G	A	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr10	108419267	108419268	chr10:108419268:G:C	rs11194082	G	C	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr10	108426823	108426824	chr10:108426824:G:C	rs77422266	G	C	G	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr10	108599152	108599153	chr10:108599153:T:G	rs1888903	T	G	T	Sox2_MA0143.3	-17	0	+	0	0	.
chr10	109031305	109031306	chr10:109031306:C:G	rs11194361	C	G	C	Sox2_MA0143.3	0	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr10	109259637	109259638	chr10:109259638:G:A	rs11194520	G	A	G	Sox2_MA0143.3	-3	0	+	0	0	.
chr10	109324406	109324407	chr10:109324407:A:C	rs10450380	A	C	C	Sox2_MA0143.3	9	0	+	0	0	.
chr10	109359810	109359811	chr10:109359811:A:G	rs7919386	A	G	G	Sox2_MA0143.3	25	0	-	0	0	.
chr10	109363028	109363029	chr10:109363029:C:G	rs73358472	C	G	C	Sox2_MA0143.3	27	0	+	0	0	.
chr10	109504505	109504506	chr10:109504506:G:A	rs7088557	G	A	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr10	109573969	109573970	chr10:109573970:A:G	rs10884802	A	G	g	Sox2_MA0143.3	-10	0	+	0	0	.
chr10	109742916	109742917	chr10:109742917:C:A	rs117389454	C	A	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr10	109961641	109961642	chr10:109961642:G:A	rs12247564	G	A	G	Sox2_MA0143.3	9	0	-	0	0	.
chr10	110075901	110075902	chr10:110075902:G:C	rs533928219	G	C	G	Sox2_MA0143.3	-16	0	-	0	0	.
chr10	110152271	110152272	chr10:110152272:G:A	rs56364548	G	A	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr10	110376698	110376699	chr10:110376699:A:C	rs77599767	A	C	C	Sox2_MA0143.3	6	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr10	110393009	110393010	chr10:110393010:C:T	rs56176639	C	T	C	Sox2_MA0143.3	-12	0	-	0	0	.
chr10	110393014	110393015	chr10:110393015:C:A	rs117204637	C	A	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr10	110410010	110410011	chr10:110410011:T:C	rs10787233	T	C	T	Sox2_MA0143.3	6	1	+	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr10	110629071	110629072	chr10:110629072:T:C	rs11195237	T	C	T	Sox2_MA0143.3	27	0	+	0	0	.
chr10	110638136	110638137	chr10:110638137:A:G	rs73353164	A	G	A	Sox2_MA0143.3	26	0	+	0	0	.
chr10	110641907	110641908	chr10:110641908:A:G	rs11591895	A	G	A	Sox2_MA0143.3	-18	0	+	0	0	.
chr10	110705065	110705066	chr10:110705066:C:T	rs11195275	C	T	T	Sox2_MA0143.3	-4	0	+	0	0	.
chr10	110705086	110705087	chr10:110705087:T:G	rs11195276	T	G	T	Sox2_MA0143.3	17	0	+	0	0	.
chr10	110730777	110730778	chr10:110730778:G:A	rs7072857	G	A	G	Sox2_MA0143.3	7	1	+	8.864090315184848	3.5547341015215945	CCTTTGTG
chr10	110759116	110759117	chr10:110759117:G:A	rs77119184	G	A	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr10	110774842	110774843	chr10:110774843:A:T	rs371956439	A	T	A	Sox2_MA0143.3	15	0	+	0	0	.
chr10	110843186	110843187	chr10:110843187:C:T	rs11195352	C	T	C	Sox2_MA0143.3	22	0	-	0	0	.
chr10	110871098	110871099	chr10:110871099:C:A	rs1322997	C	A	A	Sox2_MA0143.3	-5	0	-	0	0	.
chr10	110916371	110916372	chr10:110916372:A:C	rs764898525	A	C	A	Sox2_MA0143.3	-7	0	+	0	0	.
chr10	110920452	110920453	chr10:110920453:T:C	rs199735735	T	C	T	Sox2_MA0143.3	17	0	+	0	0	.
chr10	110932691	110932692	chr10:110932692:G:A	rs140227499	G	A	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr10	110932727	110932728	chr10:110932728:A:C	rs34893229	A	C	A	Sox2_MA0143.3	18	0	+	0	0	.
chr10	111038044	111038045	chr10:111038045:G:A	rs10885079	G	A	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr10	111038064	111038065	chr10:111038065:G:A	rs148473920	G	A	G	Sox2_MA0143.3	14	0	+	0	0	.
chr10	111123620	111123621	chr10:111123621:G:C	rs10437458	G	C	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr10	111127712	111127713	chr10:111127713:C:G	rs12161672	C	G	C	Sox2_MA0143.3	7	1	-	8.676919043985553	9.019595766176417	CCATTGTG
chr10	111130015	111130016	chr10:111130016:A:T	rs112592168	A	T	A	Sox2_MA0143.3	22	0	-	0	0	.
chr10	111207631	111207632	chr10:111207632:A:T	rs1414391	A	T	A	Sox2_MA0143.3	-18	0	-	0	0	.
chr10	111215561	111215562	chr10:111215562:T:G	rs116149876	T	G	T	Sox2_MA0143.3	3	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr10	111247148	111247149	chr10:111247149:C:G	rs4606416	C	G	G	Sox2_MA0143.3	13	0	+	0	0	.
chr10	111468132	111468133	chr10:111468133:C:T	rs61872664	C	T	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr10	111485860	111485861	chr10:111485861:T:G	rs3107358	T	G	G	Sox2_MA0143.3	15	0	-	0	0	.
chr10	111648324	111648325	chr10:111648325:T:C	rs1414878	T	C	T	Sox2_MA0143.3	-6	0	-	0	0	.
chr10	111714784	111714785	chr10:111714785:T:C	rs61871351	T	C	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr10	111786065	111786066	chr10:111786066:A:G	rs11819218	A	G	A	Sox2_MA0143.3	17	0	-	0	0	.
chr10	111822898	111822899	chr10:111822899:A:G	rs73364541	A	G	A	Sox2_MA0143.3	14	0	-	0	0	.
chr10	112080508	112080509	chr10:112080509:G:A	rs148183204	G	A	G	Sox2_MA0143.3	10	0	-	0	0	.
chr10	112230868	112230869	chr10:112230869:G:A	rs116766297	G	A	G	Sox2_MA0143.3	-3	0	+	0	0	.
chr10	112231446	112231447	chr10:112231447:C:T	rs12572492	C	T	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr10	112361991	112361992	chr10:112361992:C:G	rs11195928	C	G	C	Sox2_MA0143.3	11	0	+	0	0	.
chr10	112721532	112721533	chr10:112721533:C:T	rs12783142	C	T	C	Sox2_MA0143.3	26	0	-	0	0	.
chr10	112732164	112732165	chr10:112732165:T:C	rs10885378	T	C	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr10	112741925	112741926	chr10:112741926:A:G	rs7075671	A	G	A	Sox2_MA0143.3	13	0	+	0	0	.
chr10	112750919	112750920	chr10:112750920:A:G	rs185984841	A	G	A	Sox2_MA0143.3	3	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr10	112752493	112752494	chr10:112752494:T:C	rs58584521	T	C	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr10	112783790	112783791	chr10:112783791:C:A	rs113565968	C	A	C	Sox2_MA0143.3	-5	0	-	0	0	.
chr10	112789374	112789375	chr10:112789375:G:C	rs574984721	G	C	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr10	112839275	112839276	chr10:112839276:C:G	rs17746147	C	G	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr10	112842924	112842925	chr10:112842925:C:T	rs78877509	C	T	C	Sox2_MA0143.3	25	0	-	0	0	.
chr10	112912570	112912571	chr10:112912571:T:C	rs59545071	T	C	T	Sox2_MA0143.3	13	0	-	0	0	.
chr10	112933058	112933059	chr10:112933059:T:C	rs10885391	T	C	T	Sox2_MA0143.3	24	0	-	0	0	.
chr10	113061767	113061768	chr10:113061768:A:G	rs61872790	A	G	A	Sox2_MA0143.3	4	1	-	9.206767037375712	2.2980122580604916	CCTTTGTC
chr10	113131727	113131728	chr10:113131728:G:A	rs902910338	G	A	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr10	113132076	113132077	chr10:113132077:C:T	rs149896779	C	T	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr10	113169179	113169180	chr10:113169180:G:A	rs116246608	G	A	G	Sox2_MA0143.3	-9	0	+	0	0	.
chr10	113293320	113293321	chr10:113293321:G:C	rs1124385	G	C	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr10	113311597	113311598	chr10:113311598:T:C	rs550770	T	C	T	Sox2_MA0143.3	15	0	-	0	0	.
chr10	113357413	113357414	chr10:113357414:C:T	rs10885437	C	T	C	Sox2_MA0143.3	17	0	-	0	0	.
chr10	113371048	113371049	chr10:113371049:G:A	rs1031905	G	A	G	Sox2_MA0143.3	0	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr10	113376187	113376188	chr10:113376188:C:A	rs56301484	C	A	C	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr10	113427617	113427618	chr10:113427618:C:T	rs35305725	C	T	C	Sox2_MA0143.3	16	0	-	0	0	.
chr10	113432647	113432648	chr10:113432648:G:A	rs75417712	G	A	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr10	113443545	113443546	chr10:113443546:T:G	rs10885455	T	G	T	Sox2_MA0143.3	23	0	+	0	0	.
chr10	113524279	113524280	chr10:113524280:C:T	chr10:113524280:C:T	C	T	C	Sox2_MA0143.3	14	0	+	0	0	.
chr10	113556060	113556061	chr10:113556061:A:G	rs11575623	A	G	A	Sox2_MA0143.3	-18	0	-	0	0	.
chr10	113560677	113560678	chr10:113560678:C:T	rs11575703	C	T	C	Sox2_MA0143.3	-5	0	-	0	0	.
chr10	113627248	113627249	chr10:113627249:A:C	rs905830428	A	C	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr10	113627252	113627253	chr10:113627253:C:T	rs3127091	C	T	T	Sox2_MA0143.3	-2	0	+	0	0	.
chr10	113692524	113692525	chr10:113692525:G:C	rs112454710	G	C	G	Sox2_MA0143.3	19	0	-	0	0	.
chr10	113780892	113780893	chr10:113780893:C:T	rs3750900	C	T	C	Sox2_MA0143.3	19	0	-	0	0	.
chr10	113789068	113789069	chr10:113789069:A:G	rs11196493	A	G	A	Sox2_MA0143.3	6	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr10	113789211	113789212	chr10:113789212:T:A	rs9663973	T	A	T	Sox2_MA0143.3	12	0	+	0	0	.
chr10	114021872	114021873	chr10:114021873:C:T	rs75704602	C	T	C	Sox2_MA0143.3	14	0	-	0	0	.
chr10	114021877	114021878	chr10:114021878:G:C	rs11196591	G	C	G	Sox2_MA0143.3	9	0	-	0	0	.
chr10	114029777	114029778	chr10:114029778:C:T	rs12355435	C	T	C	Sox2_MA0143.3	0	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr10	114047160	114047161	chr10:114047161:T:C	rs114345878	T	C	T	Sox2_MA0143.3	-15	0	+	0	0	.
chr10	114234616	114234617	chr10:114234617:C:T	rs3930006	C	T	C	Sox2_MA0143.3	24	0	+	0	0	.
chr10	114242036	114242037	chr10:114242037:A:C	rs630051	A	C	C	Sox2_MA0143.3	10	0	+	0	0	.
chr10	114288443	114288444	chr10:114288444:A:C	rs11196683	A	C	A	Sox2_MA0143.3	17	0	-	0	0	.
chr10	114346509	114346510	chr10:114346510:G:A	rs114584860	G	A	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr10	114354262	114354263	chr10:114354263:T:C	rs7922542	T	C	T	Sox2_MA0143.3	-12	0	-	0	0	.
chr10	114372081	114372082	chr10:114372082:C:T	rs10437496	C	T	C	Sox2_MA0143.3	-20	0	-	0	0	.
chr10	114384040	114384041	chr10:114384041:A:G	rs945093	A	G	A	Sox2_MA0143.3	4	1	-	9.206767037375712	2.2980122580604916	CCTTTGTC
chr10	114384042	114384043	chr10:114384043:A:T	rs945094	A	T	T	Sox2_MA0143.3	2	1	-	9.206767037375712	9.019595766176417	CCTTTGTC
chr10	114384390	114384391	chr10:114384391:C:T	rs11597049	C	T	C	Sox2_MA0143.3	0	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr10	114384403	114384404	chr10:114384404:C:G	rs77551098	C	G	C	Sox2_MA0143.3	13	0	+	0	0	.
chr10	114384406	114384407	chr10:114384407:A:C	rs112039988	A	C	A	Sox2_MA0143.3	16	0	+	0	0	.
chr10	114389687	114389688	chr10:114389688:G:T	rs1205222599	G	T	G	Sox2_MA0143.3	14	0	-	0	0	.
chr10	114416784	114416785	chr10:114416785:T:C	rs9665297	T	C	T	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr10	114458968	114458969	chr10:114458969:C:T	rs10749166	C	T	C	Sox2_MA0143.3	16	0	-	0	0	.
chr10	114477370	114477371	chr10:114477371:C:T	rs935154723	C	T	C	Sox2_MA0143.3	26	0	-	0	0	.
chr10	114489703	114489704	chr10:114489704:C:T	rs3802737	C	T	C	Sox2_MA0143.3	17	0	-	0	0	.
chr10	114608752	114608753	chr10:114608753:A:T	rs71484950	A	T	A	Sox2_MA0143.3	-19	0	-	0	0	.
chr10	114612177	114612178	chr10:114612178:A:G	rs4752030	A	G	A	Sox2_MA0143.3	19	0	-	0	0	.
chr10	114613515	114613516	chr10:114613516:C:T	rs2497668	C	T	C	Sox2_MA0143.3	8	0	+	0	0	.
chr10	114616589	114616590	chr10:114616590:G:A	rs186507571	G	A	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr10	114703711	114703712	chr10:114703712:G:A	rs7097805	G	A	G	Sox2_MA0143.3	-9	0	+	0	0	.
chr10	114714497	114714498	chr10:114714498:A:G	rs113927921	A	G	A	Sox2_MA0143.3	-17	0	+	0	0	.
chr10	114811189	114811190	chr10:114811190:A:T	rs73363911	A	T	A	Sox2_MA0143.3	-10	0	-	0	0	.
chr10	115030409	115030410	chr10:115030410:C:T	rs11197031	C	T	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr10	115417588	115417589	chr10:115417589:C:T	rs151090033	C	T	C	Sox2_MA0143.3	9	0	+	0	0	.
chr10	115518162	115518163	chr10:115518163:G:A	rs11197258	G	A	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr10	115604488	115604489	chr10:115604489:A:C	rs11197344	A	C	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr10	115835814	115835815	chr10:115835815:C:T	rs4751569	C	T	C	Sox2_MA0143.3	-12	0	-	0	0	.
chr10	115902449	115902450	chr10:115902450:A:T	rs7067846	A	T	A	Sox2_MA0143.3	22	0	-	0	0	.
chr10	115976161	115976162	chr10:115976162:A:G	rs180705	A	G	A	Sox2_MA0143.3	23	0	+	0	0	.
chr10	116001348	116001349	chr10:116001349:G:A	rs193035543	G	A	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr10	116092958	116092959	chr10:116092959:C:T	rs7070180	C	T	T	Sox2_MA0143.3	-11	0	+	0	0	.
chr10	116156834	116156835	chr10:116156835:T:G	rs12775655	T	G	G	Sox2_MA0143.3	-9	0	+	0	0	.
chr10	116394057	116394058	chr10:116394058:G:C	rs11197656	G	C	G	Sox2_MA0143.3	18	0	+	0	0	.
chr10	116520859	116520860	chr10:116520860:G:A	rs10787706	G	A	A	Sox2_MA0143.3	1	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr10	116596017	116596018	chr10:116596018:A:G	rs2305206	A	G	A	Sox2_MA0143.3	2	1	-	9.800647049772198	3.494828071296623	CCTTTGTT
chr10	116614477	116614478	chr10:116614478:A:G	rs35046109	A	G	a	Sox2_MA0143.3	-10	0	+	0	0	.
chr10	116656381	116656382	chr10:116656382:T:A	rs11197785	T	A	A	Sox2_MA0143.3	-16	0	-	0	0	.
chr10	116658786	116658787	chr10:116658787:T:G	rs880887	T	G	T	Sox2_MA0143.3	20	0	+	0	0	.
chr10	116697374	116697375	chr10:116697375:C:G	rs58568639	C	G	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr10	116741196	116741197	chr10:116741197:G:C	chr10:116741197:G:C	G	C	G	Sox2_MA0143.3	27	0	-	0	0	.
chr10	116907834	116907835	chr10:116907835:A:C	rs2531690	A	C	A	Sox2_MA0143.3	-19	0	+	0	0	.
chr10	117101468	117101469	chr10:117101469:A:G	rs17095683	A	G	A	Sox2_MA0143.3	12	0	+	0	0	.
chr10	117112398	117112399	chr10:117112399:G:T	rs186119635	G	T	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr10	117159585	117159586	chr10:117159586:T:C	rs73387298	T	C	T	Sox2_MA0143.3	11	0	-	0	0	.
chr10	117227237	117227238	chr10:117227238:T:C	rs17095936	T	C	T	Sox2_MA0143.3	12	0	-	0	0	.
chr10	117312724	117312725	chr10:117312725:T:C	rs76033680	T	C	T	Sox2_MA0143.3	-8	0	+	0	0	.
chr10	117324528	117324529	chr10:117324529:T:C	rs2794435	T	C	T	Sox2_MA0143.3	-15	0	-	0	0	.
chr10	117345217	117345218	chr10:117345218:C:T	rs2532795	C	T	T	Sox2_MA0143.3	12	0	-	0	0	.
chr10	117439751	117439752	chr10:117439752:C:G	rs2794426	C	G	G	Sox2_MA0143.3	13	0	+	0	0	.
chr10	117462379	117462380	chr10:117462380:A:G	rs76715364	A	G	C	Sox2_MA0143.3	24	0	+	0	0	.
chr10	117477083	117477084	chr10:117477084:G:A	rs114762425	G	A	G	Sox2_MA0143.3	16	0	+	0	0	.
chr10	117503388	117503389	chr10:117503389:A:G	rs10787774	A	G	G	Sox2_MA0143.3	15	0	+	0	0	.
chr10	117557725	117557726	chr10:117557726:G:A	rs12411900	G	A	G	Sox2_MA0143.3	19	0	-	0	0	.
chr10	117577480	117577481	chr10:117577481:C:A	rs7088735	C	A	C	Sox2_MA0143.3	21	0	+	0	0	.
chr10	117720981	117720982	chr10:117720982:G:C	rs113251393	G	C	G	Sox2_MA0143.3	13	0	+	0	0	.
chr10	117720987	117720988	chr10:117720988:C:T	rs1925274	C	T	C	Sox2_MA0143.3	19	0	+	0	0	.
chr10	117747490	117747491	chr10:117747491:C:T	rs7476731	C	T	C	Sox2_MA0143.3	5	1	-	9.019595766176417	2.110840986861197	CCATTGTC
chr10	117808621	117808622	chr10:117808622:G:A	rs17096846	G	A	G	Sox2_MA0143.3	21	0	-	0	0	.
chr10	117812886	117812887	chr10:117812887:T:C	rs61199055	T	C	T	Sox2_MA0143.3	20	0	+	0	0	.
chr10	117812891	117812892	chr10:117812892:C:T	rs35563099	C	T	C	Sox2_MA0143.3	25	0	+	0	0	.
chr10	117955479	117955480	chr10:117955480:T:C	rs17564300	T	C	T	Sox2_MA0143.3	4	1	+	3.5547341015215945	-3.3540206777936254	CCTTTGTA
chr10	118035221	118035222	chr10:118035222:G:C	rs4751645	G	C	G	Sox2_MA0143.3	-5	0	+	0	0	.
chr10	118295381	118295382	chr10:118295382:A:G	rs4751650	A	G	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr10	118374409	118374410	chr10:118374410:G:T	rs10886226	G	T	G	Sox2_MA0143.3	23	0	-	0	0	.
chr10	118408076	118408077	chr10:118408077:A:G	rs10787829	A	G	A	Sox2_MA0143.3	-4	0	+	0	0	.
chr10	118408090	118408091	chr10:118408091:G:A	rs1246889	G	A	G	Sox2_MA0143.3	10	0	+	0	0	.
chr10	118491610	118491611	chr10:118491611:T:C	rs1996382	T	C	C	Sox2_MA0143.3	7	1	+	9.800647049772198	9.206767037375712	CCTTTGTT
chr10	118504744	118504745	chr10:118504745:G:A	rs1447057486	G	A	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr10	118584264	118584265	chr10:118584265:G:A	rs1766249	G	A	A	Sox2_MA0143.3	8	0	-	0	0	.
chr10	118596944	118596945	chr10:118596945:G:A	rs4440948	G	A	G	Sox2_MA0143.3	5	1	+	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr10	118668004	118668005	chr10:118668005:T:C	rs1312894	T	C	T	Sox2_MA0143.3	4	1	+	8.864090315184848	1.9553355358696274	CCTTTGTG
chr10	118738291	118738292	chr10:118738292:G:A	rs11198583	G	A	G	Sox2_MA0143.3	9	0	-	0	0	.
chr10	118755239	118755240	chr10:118755240:C:G	rs41302721	C	G	C	Sox2_MA0143.3	18	0	-	0	0	.
chr10	118755271	118755272	chr10:118755272:C:T	rs984888234	C	T	c	Sox2_MA0143.3	-14	0	-	0	0	.
chr10	118821392	118821393	chr10:118821393:G:C	rs12784666	G	C	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr10	118866297	118866298	chr10:118866298:T:A	rs148500171	T	A	T	Sox2_MA0143.3	22	0	+	0	0	.
chr10	118873620	118873621	chr10:118873621:C:T	rs7905716	C	T	T	Sox2_MA0143.3	24	0	+	0	0	.
chr10	118918140	118918141	chr10:118918141:C:T	rs2148497	C	T	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr10	118928360	118928361	chr10:118928361:A:G	rs11198674	A	G	G	Sox2_MA0143.3	4	1	-	9.800647049772198	2.8918922704569785	CCTTTGTT
chr10	118965700	118965701	chr10:118965701:G:A	rs11815594	G	A	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr10	118983659	118983660	chr10:118983660:G:A	rs691222	G	A	g	Sox2_MA0143.3	-19	0	+	0	0	.
chr10	119056544	119056545	chr10:119056545:C:T	rs11813452	C	T	C	Sox2_MA0143.3	1	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr10	119085481	119085482	chr10:119085482:G:A	rs12411884	G	A	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr10	119178304	119178305	chr10:119178305:T:C	rs999047989	T	C	T	Sox2_MA0143.3	-18	0	+	0	0	.
chr10	119178315	119178316	chr10:119178316:G:A	rs34364753	G	A	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr10	119178345	119178346	chr10:119178346:T:C	rs559933837	T	C	T	Sox2_MA0143.3	23	0	+	0	0	.
chr10	119218670	119218671	chr10:119218671:A:G	rs17098556	A	G	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr10	119223236	119223237	chr10:119223237:G:A	rs61876596	G	A	G	Sox2_MA0143.3	12	0	+	0	0	.
chr10	119247622	119247623	chr10:119247623:T:C	rs79132747	T	C	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr10	119266073	119266074	chr10:119266074:C:G	rs12357243	C	G	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr10	119308685	119308686	chr10:119308686:C:T	rs2061078	C	T	C	Sox2_MA0143.3	23	0	-	0	0	.
chr10	119313639	119313640	chr10:119313640:G:C	rs1024884407	G	C	G	Sox2_MA0143.3	-5	0	+	0	0	.
chr10	119348011	119348012	chr10:119348012:C:T	rs17676433	C	T	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr10	119356105	119356106	chr10:119356106:C:T	rs12770361	C	T	C	Sox2_MA0143.3	22	0	-	0	0	.
chr10	119383799	119383800	chr10:119383800:C:T	rs74157668	C	T	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr10	119396082	119396083	chr10:119396083:C:T	rs17095980	C	T	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr10	119429953	119429954	chr10:119429954:C:T	rs915122	C	T	T	Sox2_MA0143.3	-3	0	+	0	0	.
chr10	119429967	119429968	chr10:119429968:C:T	rs915121	C	T	C	Sox2_MA0143.3	11	0	+	0	0	.
chr10	119480966	119480967	chr10:119480967:C:T	rs11198958	C	T	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr10	119480980	119480981	chr10:119480981:T:C	rs36097989	T	C	T	Sox2_MA0143.3	7	1	+	9.613475778572903	9.019595766176417	CCATTGTT
chr10	119480982	119480983	chr10:119480983:C:G	rs2039486	C	G	C	Sox2_MA0143.3	9	0	+	0	0	.
chr10	119519057	119519058	chr10:119519058:T:C	rs1974211	T	C	T	Sox2_MA0143.3	3	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr10	119569563	119569564	chr10:119569564:C:A	rs7901599	C	A	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr10	119771207	119771208	chr10:119771208:A:G	rs196200	A	G	A	Sox2_MA0143.3	-9	0	+	0	0	.
chr10	119872859	119872860	chr10:119872860:C:T	rs182534107	C	T	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr10	119968686	119968687	chr10:119968687:C:T	rs11199137	C	T	C	Sox2_MA0143.3	23	0	+	0	0	.
chr10	119981387	119981388	chr10:119981388:G:A	rs12774321	G	A	G	Sox2_MA0143.3	10	0	+	0	0	.
chr10	120006243	120006244	chr10:120006244:G:A	rs76963609	G	A	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr10	120284815	120284816	chr10:120284816:T:C	rs6585604	T	C	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr10	120337239	120337240	chr10:120337240:G:A	rs574485855	G	A	g	Sox2_MA0143.3	24	0	+	0	0	.
chr10	120459480	120459481	chr10:120459481:G:A	rs2148477	G	A	G	Sox2_MA0143.3	21	0	+	0	0	.
chr10	120480366	120480367	chr10:120480367:C:T	rs1326661	C	T	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr10	120508393	120508394	chr10:120508394:G:A	rs17100287	G	A	G	Sox2_MA0143.3	-11	0	+	0	0	.
chr10	120570687	120570688	chr10:120570688:G:T	rs11199412	G	T	G	Sox2_MA0143.3	17	0	-	0	0	.
chr10	120571864	120571865	chr10:120571865:T:G	rs12260111	T	G	T	Sox2_MA0143.3	4	1	+	9.206767037375712	2.2980122580604916	CCTTTGTC
chr10	120599831	120599832	chr10:120599832:C:T	rs9943454	C	T	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr10	120729770	120729771	chr10:120729771:A:C	rs74810237	A	C	A	Sox2_MA0143.3	10	0	-	0	0	.
chr10	120897581	120897582	chr10:120897582:T:C	rs11199633	T	C	C	Sox2_MA0143.3	17	0	+	0	0	.
chr10	120928878	120928879	chr10:120928879:T:C	rs146108087	T	C	T	Sox2_MA0143.3	3	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr10	120931725	120931726	chr10:120931726:C:G	rs12269295	C	G	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr10	121097079	121097080	chr10:121097080:A:G	rs74722911	A	G	.	Sox2_MA0143.3	17	0	-	0	0	.
chr10	121097085	121097086	chr10:121097086:C:T	rs2247812	C	T	.	Sox2_MA0143.3	11	0	-	0	0	.
chr10	121154938	121154939	chr10:121154939:T:C	rs118153430	T	C	T	Sox2_MA0143.3	-17	0	+	0	0	.
chr10	121154952	121154953	chr10:121154953:G:A	rs117165122	G	A	G	Sox2_MA0143.3	-3	0	+	0	0	.
chr10	121263441	121263442	chr10:121263442:G:A	rs11199862	G	A	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr10	121390786	121390787	chr10:121390787:A:G	rs4752549	A	G	G	Sox2_MA0143.3	-11	0	+	0	0	.
chr10	121415023	121415024	chr10:121415024:T:A	rs116905523	T	A	T	Sox2_MA0143.3	21	0	-	0	0	.
chr10	121415048	121415049	chr10:121415049:T:A	rs7094364	T	A	A	Sox2_MA0143.3	-4	0	-	0	0	.
chr10	121426041	121426042	chr10:121426042:G:A	rs11199954	G	A	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr10	121434483	121434484	chr10:121434484:T:C	rs11199964	T	C	T	Sox2_MA0143.3	23	0	+	0	0	.
chr10	121436795	121436796	chr10:121436796:A:G	rs7916940	A	G	A	Sox2_MA0143.3	25	0	-	0	0	.
chr10	121442268	121442269	chr10:121442269:C:T	rs1896423	C	T	C	Sox2_MA0143.3	8	0	+	0	0	.
chr10	121450508	121450509	chr10:121450509:C:T	rs964191188	C	T	C	Sox2_MA0143.3	8	0	+	0	0	.
chr10	121476069	121476070	chr10:121476070:G:A	rs1649160	G	A	G	Sox2_MA0143.3	13	0	-	0	0	.
chr10	121516576	121516577	chr10:121516577:G:A	rs3135761	G	A	G	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr10	121608774	121608775	chr10:121608775:C:G	rs78088943	C	G	C	Sox2_MA0143.3	22	0	+	0	0	.
chr10	121617309	121617310	chr10:121617310:C:T	rs149451274	C	T	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr10	121628707	121628708	chr10:121628708:G:A	rs7902276	G	A	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr10	121631270	121631271	chr10:121631271:T:G	rs1631281	T	G	G	Sox2_MA0143.3	14	0	-	0	0	.
chr10	121696087	121696088	chr10:121696088:A:G	rs10749425	A	G	G	Sox2_MA0143.3	11	0	+	0	0	.
chr10	121732749	121732750	chr10:121732750:A:C	rs11200118	A	C	A	Sox2_MA0143.3	-13	0	+	0	0	.
chr10	121854863	121854864	chr10:121854864:T:C	rs4752610	T	C	C	Sox2_MA0143.3	22	0	+	0	0	.
chr10	121887425	121887426	chr10:121887426:C:T	rs12268872	C	T	C	Sox2_MA0143.3	16	0	-	0	0	.
chr10	121949680	121949681	chr10:121949681:C:A	chr10:121949681:C:A	C	A	C	Sox2_MA0143.3	7	1	-	8.864090315184848	9.800647049772198	CCTTTGTG
chr10	121949680	121949681	chr10:121949681:C:G	rs6585770	C	G	C	Sox2_MA0143.3	7	1	-	8.864090315184848	9.206767037375712	CCTTTGTG
chr10	122028022	122028023	chr10:122028023:G:C	rs34860269	G	C	g	Sox2_MA0143.3	-19	0	+	0	0	.
chr10	122052071	122052072	chr10:122052072:T:C	rs76042909	T	C	C	Sox2_MA0143.3	26	0	-	0	0	.
chr10	122126965	122126966	chr10:122126966:T:C	rs4314996	T	C	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr10	122198790	122198791	chr10:122198791:G:A	rs143185248	G	A	G	Sox2_MA0143.3	19	0	+	0	0	.
chr10	122207504	122207505	chr10:122207505:A:G	rs115746425	A	G	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr10	122256193	122256194	chr10:122256194:C:T	rs10887112	C	T	T	Sox2_MA0143.3	15	0	+	0	0	.
chr10	122257995	122257996	chr10:122257996:G:C	rs911785	G	C	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr10	122261684	122261685	chr10:122261685:A:G	rs7081032	A	G	g	Sox2_MA0143.3	19	0	+	0	0	.
chr10	122261685	122261686	chr10:122261686:G:A	rs7081407	G	A	a	Sox2_MA0143.3	20	0	+	0	0	.
chr10	122274670	122274671	chr10:122274671:G:A	rs35063483	G	A	G	Sox2_MA0143.3	11	0	+	0	0	.
chr10	122301556	122301557	chr10:122301557:G:A	rs74159114	G	A	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr10	122309053	122309054	chr10:122309054:A:G	rs12264658	A	G	A	Sox2_MA0143.3	6	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr10	122346784	122346785	chr10:122346785:G:A	rs11200565	G	A	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr10	122349275	122349276	chr10:122349276:G:C	rs117394777	G	C	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr10	122349282	122349283	chr10:122349283:C:T	rs6585820	C	T	T	Sox2_MA0143.3	-15	0	-	0	0	.
chr10	122375976	122375977	chr10:122375977:G:A	rs114002585	G	A	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr10	122441863	122441864	chr10:122441864:C:A	rs559846762	C	A	C	Sox2_MA0143.3	16	0	+	0	0	.
chr10	122455694	122455695	chr10:122455695:T:C	rs36212733	T	C	T	Sox2_MA0143.3	24	0	-	0	0	.
chr10	122475670	122475671	chr10:122475671:G:A	rs79057333	G	A	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr10	122475709	122475710	chr10:122475710:T:G	rs72834453	T	G	T	Sox2_MA0143.3	22	0	+	0	0	.
chr10	122486485	122486486	chr10:122486486:A:G	rs11200651	A	G	G	Sox2_MA0143.3	-5	0	+	0	0	.
chr10	122486486	122486487	chr10:122486487:C:T	rs111914813	C	T	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr10	122510301	122510302	chr10:122510302:C:G	rs76357476	C	G	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr10	122514154	122514155	chr10:122514155:C:T	rs2293871	C	T	T	Sox2_MA0143.3	-10	0	+	0	0	.
chr10	122558608	122558609	chr10:122558609:G:C	rs7901999	G	C	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr10	122572128	122572129	chr10:122572129:G:T	rs2981800	G	T	g	Sox2_MA0143.3	-12	0	-	0	0	.
chr10	122579861	122579862	chr10:122579862:A:G	rs1969620	A	G	A	Sox2_MA0143.3	-14	0	-	0	0	.
chr10	122638243	122638244	chr10:122638244:A:C	rs76217740	A	C	C	Sox2_MA0143.3	21	0	+	0	0	.
chr10	122646382	122646383	chr10:122646383:G:T	rs17811089	G	T	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr10	122655462	122655463	chr10:122655463:C:T	rs3013178	C	T	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr10	122656896	122656897	chr10:122656897:C:G	chr10:122656897:C:G	C	G	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr10	122845786	122845787	chr10:122845787:C:T	rs76691412	C	T	C	Sox2_MA0143.3	13	0	+	0	0	.
chr10	122849766	122849767	chr10:122849767:T:C	rs2153669	T	C	T	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr10	122969252	122969253	chr10:122969253:A:C	rs2421149	A	C	C	Sox2_MA0143.3	21	0	+	0	0	.
chr10	123230324	123230325	chr10:123230325:T:C	rs149920427	T	C	T	Sox2_MA0143.3	-5	0	+	0	0	.
chr10	123230342	123230343	chr10:123230343:G:A	rs113854227	G	A	G	Sox2_MA0143.3	13	0	+	0	0	.
chr10	123236987	123236988	chr10:123236988:T:C	rs34788081	T	C	C	Sox2_MA0143.3	14	0	+	0	0	.
chr10	123353733	123353734	chr10:123353734:C:T	rs1007821	C	T	T	Sox2_MA0143.3	-1	0	-	0	0	.
chr10	123422894	123422895	chr10:123422895:C:T	rs10902930	C	T	C	Sox2_MA0143.3	-12	0	-	0	0	.
chr10	123465540	123465541	chr10:123465541:C:T	rs845080	C	T	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr10	123478802	123478803	chr10:123478803:G:A	rs2009001	G	A	G	Sox2_MA0143.3	14	0	-	0	0	.
chr10	123583166	123583167	chr10:123583167:A:G	rs2280190	A	G	A	Sox2_MA0143.3	3	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr10	123617903	123617904	chr10:123617904:G:A	rs841016	G	A	G	Sox2_MA0143.3	23	0	-	0	0	.
chr10	123640178	123640179	chr10:123640179:C:G	rs60582947	C	G	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr10	123642271	123642272	chr10:123642272:G:T	rs1238117	G	T	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr10	123648671	123648672	chr10:123648672:C:T	rs12355421	C	T	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr10	123728812	123728813	chr10:123728813:G:A	rs10794560	G	A	G	Sox2_MA0143.3	11	0	+	0	0	.
chr10	123783646	123783647	chr10:123783647:T:C	rs765335	T	C	T	Sox2_MA0143.3	-9	0	-	0	0	.
chr10	123862169	123862170	chr10:123862170:C:T	rs183248985	C	T	C	Sox2_MA0143.3	7	1	-	8.676919043985553	3.3675628303222993	CCATTGTG
chr10	123891276	123891277	chr10:123891277:A:C	rs28513406	A	C	C	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr10	123896033	123896034	chr10:123896034:T:C	rs28687195	T	C	T	Sox2_MA0143.3	27	0	-	0	0	.
chr10	123936711	123936712	chr10:123936712:G:A	rs116201754	G	A	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr10	123940891	123940892	chr10:123940892:C:T	rs28690234	C	T	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr10	123943934	123943935	chr10:123943935:T:C	rs58342121	T	C	T	Sox2_MA0143.3	-9	0	+	0	0	.
chr10	123947001	123947002	chr10:123947002:A:T	rs117391503	A	T	A	Sox2_MA0143.3	-14	0	+	0	0	.
chr10	123952660	123952661	chr10:123952661:G:A	rs1220296847	G	A	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr10	124000809	124000810	chr10:124000810:A:G	rs74642449	A	G	a	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr10	124042997	124042998	chr10:124042998:A:C	rs28707473	A	C	A	Sox2_MA0143.3	17	0	+	0	0	.
chr10	124056644	124056645	chr10:124056645:A:G	rs7899498	A	G	A	Sox2_MA0143.3	-3	0	-	0	0	.
chr10	124063705	124063706	chr10:124063706:A:G	rs4636595	A	G	A	Sox2_MA0143.3	12	0	-	0	0	.
chr10	124088661	124088662	chr10:124088662:C:G	rs4929813	C	G	C	Sox2_MA0143.3	24	0	-	0	0	.
chr10	124118749	124118750	chr10:124118750:G:T	rs969812907	G	T	T	Sox2_MA0143.3	20	0	+	0	0	.
chr10	124131497	124131498	chr10:124131498:G:A	rs36197665	G	A	G	Sox2_MA0143.3	23	0	-	0	0	.
chr10	124132283	124132284	chr10:124132284:C:T	rs926052880	C	T	C	Sox2_MA0143.3	18	0	-	0	0	.
chr10	124153475	124153476	chr10:124153476:G:A	rs941300120	G	A	g	Sox2_MA0143.3	13	0	-	0	0	.
chr10	124161819	124161820	chr10:124161820:G:A	rs1004600121	G	A	g	Sox2_MA0143.3	19	0	-	0	0	.
chr10	124172087	124172088	chr10:124172088:T:G	chr10:124172088:T:G	T	G	T	Sox2_MA0143.3	22	0	+	0	0	.
chr10	124176533	124176534	chr10:124176534:C:T	rs1044849605	C	T	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr10	124258132	124258133	chr10:124258133:T:C	rs10794143	T	C	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr10	124258133	124258134	chr10:124258134:G:C	rs10901742	G	C	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr10	124263236	124263237	chr10:124263237:G:T	rs12219005	G	T	G	Sox2_MA0143.3	17	0	+	0	0	.
chr10	124288669	124288670	chr10:124288670:G:T	rs73374300	G	T	G	Sox2_MA0143.3	-2	0	+	0	0	.
chr10	124304156	124304157	chr10:124304157:G:T	rs7098566	G	T	T	Sox2_MA0143.3	25	0	+	0	0	.
chr10	124308601	124308602	chr10:124308602:G:A	rs4505015	G	A	A	Sox2_MA0143.3	-10	0	+	0	0	.
chr10	124325626	124325627	chr10:124325627:T:G	rs141191810	T	G	T	Sox2_MA0143.3	26	0	+	0	0	.
chr10	124377682	124377683	chr10:124377683:T:C	rs12253870	T	C	C	Sox2_MA0143.3	6	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr10	124403244	124403245	chr10:124403245:A:C	rs2240882	A	C	A	Sox2_MA0143.3	-4	0	+	0	0	.
chr10	124475749	124475750	chr10:124475750:A:G	rs12784000	A	G	G	Sox2_MA0143.3	18	0	+	0	0	.
chr10	124497137	124497138	chr10:124497138:C:T	rs3824809	C	T	T	Sox2_MA0143.3	11	0	-	0	0	.
chr10	124553233	124553234	chr10:124553234:C:A	rs61870228	C	A	C	Sox2_MA0143.3	15	0	-	0	0	.
chr10	124567557	124567558	chr10:124567558:T:C	rs11591888	T	C	T	Sox2_MA0143.3	13	0	+	0	0	.
chr10	124569592	124569593	chr10:124569593:C:T	rs10794152	C	T	C	Sox2_MA0143.3	26	0	+	0	0	.
chr10	124602381	124602382	chr10:124602382:G:A	rs10751598	G	A	G	Sox2_MA0143.3	13	0	+	0	0	.
chr10	124604000	124604001	chr10:124604001:G:T	rs961548718	G	T	G	Sox2_MA0143.3	-9	0	+	0	0	.
chr10	124628381	124628382	chr10:124628382:C:T	rs3781472	C	T	C	Sox2_MA0143.3	22	0	+	0	0	.
chr10	124648620	124648621	chr10:124648621:C:T	rs3781463	C	T	C	Sox2_MA0143.3	11	0	-	0	0	.
chr10	124687235	124687236	chr10:124687236:C:A	rs561142432	C	A	C	Sox2_MA0143.3	10	0	-	0	0	.
chr10	124730212	124730213	chr10:124730213:C:T	rs11245344	C	T	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr10	124730216	124730217	chr10:124730217:T:A	rs74340305	T	A	T	Sox2_MA0143.3	-10	0	-	0	0	.
chr10	124995195	124995196	chr10:124995196:C:T	rs115336872	C	T	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr10	124995196	124995197	chr10:124995197:G:A	rs11245453	G	A	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr10	125001416	125001417	chr10:125001417:T:C	rs371403317	T	C	T	Sox2_MA0143.3	-11	0	-	0	0	.
chr10	125080451	125080452	chr10:125080452:G:A	rs56148630	G	A	G	Sox2_MA0143.3	14	0	-	0	0	.
chr10	125084283	125084284	chr10:125084284:G:A	rs1418265578	G	A	G	Sox2_MA0143.3	1	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr10	125084286	125084287	chr10:125084287:T:C	rs573823340	T	C	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr10	125104228	125104229	chr10:125104229:C:T	rs17643974	C	T	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr10	125104229	125104230	chr10:125104230:G:A	rs112348753	G	A	G	Sox2_MA0143.3	-5	0	+	0	0	.
chr10	125134595	125134596	chr10:125134596:A:G	rs1693623	A	G	A	Sox2_MA0143.3	3	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr10	125155364	125155365	chr10:125155365:T:G	rs12254098	T	G	T	Sox2_MA0143.3	-11	0	-	0	0	.
chr10	125174005	125174006	chr10:125174006:G:A	rs2681922	G	A	A	Sox2_MA0143.3	-14	0	+	0	0	.
chr10	125218600	125218601	chr10:125218601:C:G	rs77631773	C	G	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr10	125246519	125246520	chr10:125246520:C:T	rs4962434	C	T	T	Sox2_MA0143.3	-10	0	-	0	0	.
chr10	125251299	125251300	chr10:125251300:G:A	rs4962437	G	A	A	Sox2_MA0143.3	-13	0	-	0	0	.
chr10	125305188	125305189	chr10:125305189:G:C	rs11244414	G	C	C	Sox2_MA0143.3	14	0	-	0	0	.
chr10	125459554	125459555	chr10:125459555:C:T	rs6597706	C	T	C	Sox2_MA0143.3	25	0	-	0	0	.
chr10	125545608	125545609	chr10:125545609:T:G	rs75379613	T	G	T	Sox2_MA0143.3	24	0	+	0	0	.
chr10	125548609	125548610	chr10:125548610:G:A	rs115693307	G	A	G	Sox2_MA0143.3	13	0	-	0	0	.
chr10	125599502	125599503	chr10:125599503:G:A	rs17153242	G	A	G	Sox2_MA0143.3	12	0	+	0	0	.
chr10	125639931	125639932	chr10:125639932:C:A	rs9422905	C	A	A	Sox2_MA0143.3	14	0	-	0	0	.
chr10	125721712	125721713	chr10:125721713:G:A	rs9804381	G	A	A	Sox2_MA0143.3	17	0	-	0	0	.
chr10	125787222	125787223	chr10:125787223:T:C	rs9633753	T	C	C	Sox2_MA0143.3	23	0	+	0	0	.
chr10	125882690	125882691	chr10:125882691:C:T	rs2366052	C	T	C	Sox2_MA0143.3	5	1	-	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr10	126059402	126059403	chr10:126059403:G:A	rs1278271	G	A	G	Sox2_MA0143.3	-3	0	+	0	0	.
chr10	126061028	126061029	chr10:126061029:G:A	rs1278274	G	A	A	Sox2_MA0143.3	23	0	+	0	0	.
chr10	126063644	126063645	chr10:126063645:C:T	rs150878715	C	T	C	Sox2_MA0143.3	24	0	-	0	0	.
chr10	126085661	126085662	chr10:126085662:A:G	rs1278357	A	G	G	Sox2_MA0143.3	17	0	+	0	0	.
chr10	126222963	126222964	chr10:126222964:A:G	rs10794069	A	G	A	Sox2_MA0143.3	26	0	+	0	0	.
chr10	126242153	126242154	chr10:126242154:A:G	rs11594573	A	G	A	Sox2_MA0143.3	15	0	+	0	0	.
chr10	126254707	126254708	chr10:126254708:G:A	rs4962328	G	A	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr10	126277411	126277412	chr10:126277412:A:G	rs2886686	A	G	A	Sox2_MA0143.3	-18	0	-	0	0	.
chr10	126429195	126429196	chr10:126429196:G:A	rs7099858	G	A	G	Sox2_MA0143.3	9	0	+	0	0	.
chr10	126520630	126520631	chr10:126520631:T:C	rs2366732	T	C	t	Sox2_MA0143.3	20	0	-	0	0	.
chr10	126560484	126560485	chr10:126560485:T:C	rs10794089	T	C	C	Sox2_MA0143.3	24	0	-	0	0	.
chr10	126560495	126560496	chr10:126560496:C:T	rs10794090	C	T	C	Sox2_MA0143.3	13	0	-	0	0	.
chr10	126718556	126718557	chr10:126718557:G:A	rs60985995	G	A	A	Sox2_MA0143.3	-11	0	+	0	0	.
chr10	126867501	126867502	chr10:126867502:C:T	rs116444539	C	T	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr10	126880701	126880702	chr10:126880702:C:T	rs4962376	C	T	T	Sox2_MA0143.3	9	0	-	0	0	.
chr10	126899274	126899275	chr10:126899275:C:A	rs4962641	C	A	C	Sox2_MA0143.3	1	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr10	126908931	126908932	chr10:126908932:C:G	rs139057052	C	G	C	Sox2_MA0143.3	19	0	-	0	0	.
chr10	126958470	126958471	chr10:126958471:T:G	rs1003829682	T	G	T	Sox2_MA0143.3	18	0	-	0	0	.
chr10	126958505	126958506	chr10:126958506:A:G	rs1036025297	A	G	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr10	127003608	127003609	chr10:127003609:C:T	rs143170109	C	T	c	Sox2_MA0143.3	17	0	+	0	0	.
chr10	127012559	127012560	chr10:127012560:G:A	rs138941283	G	A	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr10	127022883	127022884	chr10:127022884:A:G	rs2275535	A	G	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr10	127032071	127032072	chr10:127032072:G:A	rs2275534	G	A	A	Sox2_MA0143.3	-1	0	-	0	0	.
chr10	127162721	127162722	chr10:127162722:C:T	rs1413592	C	T	C	Sox2_MA0143.3	22	0	-	0	0	.
chr10	127162751	127162752	chr10:127162752:A:G	rs1413591	A	G	A	Sox2_MA0143.3	-8	0	-	0	0	.
chr10	127243276	127243277	chr10:127243277:A:C	rs7077776	A	C	A	Sox2_MA0143.3	-10	0	-	0	0	.
chr10	127254579	127254580	chr10:127254580:T:A	rs12570632	T	A	T	Sox2_MA0143.3	6	1	+	8.676919043985553	1.7681642646703326	CCATTGTG
chr10	127259683	127259684	chr10:127259684:T:C	rs75228001	T	C	C	Sox2_MA0143.3	8	0	-	0	0	.
chr10	127279461	127279462	chr10:127279462:A:G	rs12357609	A	G	A	Sox2_MA0143.3	10	0	-	0	0	.
chr10	127298524	127298525	chr10:127298525:C:A	rs57257052	C	A	C	Sox2_MA0143.3	1	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr10	127360333	127360334	chr10:127360334:A:G	rs11017549	A	G	G	Sox2_MA0143.3	9	0	-	0	0	.
chr10	127372804	127372805	chr10:127372805:C:T	rs11017657	C	T	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr10	127389368	127389369	chr10:127389369:A:G	rs1926430	A	G	A	Sox2_MA0143.3	-3	0	-	0	0	.
chr10	127389369	127389370	chr10:127389370:C:T	rs4503444	C	T	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr10	127397562	127397563	chr10:127397563:T:C	rs10829964	T	C	-	Sox2_MA0143.3	-12	0	+	0	0	.
chr10	127402198	127402199	chr10:127402199:T:G	rs10829972	T	G	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr10	127412945	127412946	chr10:127412946:A:G	rs7896279	A	G	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr10	127435375	127435376	chr10:127435376:C:T	rs149913213	C	T	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr10	127463080	127463081	chr10:127463081:A:G	rs4751420	A	G	G	Sox2_MA0143.3	22	0	+	0	0	.
chr10	127463318	127463319	chr10:127463319:A:G	rs10830078	A	G	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr10	127472248	127472249	chr10:127472249:G:A	rs11018129	G	A	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr10	127492856	127492857	chr10:127492857:T:C	rs12244197	T	C	T	Sox2_MA0143.3	-1	0	+	0	0	.
chr10	127549086	127549087	chr10:127549087:T:G	rs7894110	T	G	G	Sox2_MA0143.3	18	0	-	0	0	.
chr10	127587884	127587885	chr10:127587885:G:A	rs79656975	G	A	G	Sox2_MA0143.3	0	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr10	127687810	127687811	chr10:127687811:G:A	rs60812718	G	A	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr10	127713204	127713205	chr10:127713205:C:T	rs11018277	C	T	C	Sox2_MA0143.3	19	0	-	0	0	.
chr10	127736974	127736975	chr10:127736975:C:T	rs72843150	C	T	C	Sox2_MA0143.3	19	0	-	0	0	.
chr10	127857244	127857245	chr10:127857245:C:A	rs56233057	C	A	C	Sox2_MA0143.3	11	0	+	0	0	.
chr10	127866808	127866809	chr10:127866809:G:A	rs11018370	G	A	G	Sox2_MA0143.3	12	0	+	0	0	.
chr10	127903708	127903709	chr10:127903709:T:A	rs142920962	T	A	T	Sox2_MA0143.3	7	1	-	3.5547341015215945	9.800647049772198	CCTTTGTA
chr10	127906344	127906345	chr10:127906345:T:C	rs4751550	T	C	C	Sox2_MA0143.3	21	0	-	0	0	.
chr10	127916967	127916968	chr10:127916968:G:T	rs77730651	G	T	G	Sox2_MA0143.3	15	0	+	0	0	.
chr10	127963421	127963422	chr10:127963422:G:A	rs11018424	G	A	A	Sox2_MA0143.3	15	0	+	0	0	.
chr10	128042223	128042224	chr10:128042224:G:A	rs11016032	G	A	G	Sox2_MA0143.3	27	0	-	0	0	.
chr10	128061143	128061144	chr10:128061144:T:C	rs55962763	T	C	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr10	128061158	128061159	chr10:128061159:G:A	rs4431936	G	A	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr10	128061159	128061160	chr10:128061160:C:A	rs9943415	C	A	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr10	128076970	128076971	chr10:128076971:A:G	rs4304675	A	G	G	Sox2_MA0143.3	16	0	-	0	0	.
chr10	128087117	128087118	chr10:128087118:A:G	rs77099067	A	G	A	Sox2_MA0143.3	-19	0	+	0	0	.
chr10	128289431	128289432	chr10:128289432:G:A	rs61873874	G	A	G	Sox2_MA0143.3	19	0	+	0	0	.
chr10	128412314	128412315	chr10:128412315:G:A	rs140745282	G	A	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr10	128419455	128419456	chr10:128419456:T:C	rs7911827	T	C	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr10	128431578	128431579	chr10:128431579:T:G	rs12782052	T	G	G	Sox2_MA0143.3	9	0	+	0	0	.
chr10	128456722	128456723	chr10:128456723:C:T	rs35874146	C	T	C	Sox2_MA0143.3	24	0	+	0	0	.
chr10	128464140	128464141	chr10:128464141:C:G	rs59454464	C	G	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr10	128473820	128473821	chr10:128473821:A:G	rs12411816	A	G	A	Sox2_MA0143.3	22	0	+	0	0	.
chr10	128479043	128479044	chr10:128479044:A:T	rs76683124	A	T	A	Sox2_MA0143.3	26	0	+	0	0	.
chr10	128487398	128487399	chr10:128487399:C:T	rs1984218	C	T	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr10	128499533	128499534	chr10:128499534:G:A	rs11016280	G	A	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr10	128538416	128538417	chr10:128538417:G:T	rs35526390	G	T	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr10	128560354	128560355	chr10:128560355:C:T	rs1983947	C	T	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr10	128579179	128579180	chr10:128579180:T:C	rs11016344	T	C	T	Sox2_MA0143.3	12	0	+	0	0	.
chr10	128582049	128582050	chr10:128582050:A:C	rs7069198	A	C	C	Sox2_MA0143.3	3	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr10	128628712	128628713	chr10:128628713:G:T	rs10764796	G	T	G	Sox2_MA0143.3	10	0	-	0	0	.
chr10	128714395	128714396	chr10:128714396:C:T	chr10:128714396:C:T	C	T	C	Sox2_MA0143.3	22	0	-	0	0	.
chr10	128733825	128733826	chr10:128733826:C:T	rs7070568	C	T	C	Sox2_MA0143.3	0	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr10	128758997	128758998	chr10:128758998:C:T	rs78337672	C	T	c	Sox2_MA0143.3	-9	0	+	0	0	.
chr10	128808732	128808733	chr10:128808733:T:C	rs7080262	T	C	t	Sox2_MA0143.3	13	0	+	0	0	.
chr10	128813123	128813124	chr10:128813124:C:T	rs7911251	C	T	C	Sox2_MA0143.3	-5	0	-	0	0	.
chr10	128814173	128814174	chr10:128814174:T:C	rs12252560	T	C	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr10	128816885	128816886	chr10:128816886:T:A	rs12358231	T	A	T	Sox2_MA0143.3	-1	0	-	0	0	.
chr10	128854630	128854631	chr10:128854631:G:A	rs753713	G	A	G	Sox2_MA0143.3	-5	0	+	0	0	.
chr10	128854644	128854645	chr10:128854645:G:A	rs753712	G	A	G	Sox2_MA0143.3	9	0	+	0	0	.
chr10	128883538	128883539	chr10:128883539:C:G	rs78747630	C	G	C	Sox2_MA0143.3	23	0	+	0	0	.
chr10	128891838	128891839	chr10:128891839:C:T	rs1324638	C	T	C	Sox2_MA0143.3	25	0	+	0	0	.
chr10	128898624	128898625	chr10:128898625:T:A	rs549678934	T	A	T	Sox2_MA0143.3	20	0	-	0	0	.
chr10	128919750	128919751	chr10:128919751:A:C	rs1026268	A	C	C	Sox2_MA0143.3	7	1	-	9.800647049772198	8.864090315184848	CCTTTGTT
chr10	128927602	128927603	chr10:128927603:C:G	rs1037432	C	G	C	Sox2_MA0143.3	14	0	-	0	0	.
chr10	128965174	128965175	chr10:128965175:A:G	rs888845886	A	G	A	Sox2_MA0143.3	26	0	-	0	0	.
chr10	128976788	128976789	chr10:128976789:A:G	rs73378793	A	G	A	Sox2_MA0143.3	-18	0	-	0	0	.
chr10	128998306	128998307	chr10:128998307:T:C	rs191681507	T	C	T	Sox2_MA0143.3	13	0	+	0	0	.
chr10	129003454	129003455	chr10:129003455:T:C	rs1953025	T	C	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr10	129025071	129025072	chr10:129025072:T:A	rs61177972	T	A	A	Sox2_MA0143.3	-14	0	-	0	0	.
chr10	129026493	129026494	chr10:129026494:G:T	rs74160030	G	T	G	Sox2_MA0143.3	8	0	-	0	0	.
chr10	129026496	129026497	chr10:129026497:C:T	rs72853104	C	T	T	Sox2_MA0143.3	5	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr10	129042533	129042534	chr10:129042534:G:A	rs10764840	G	A	A	Sox2_MA0143.3	-19	0	-	0	0	.
chr10	129061801	129061802	chr10:129061802:G:A	rs77864537	G	A	G	Sox2_MA0143.3	26	0	-	0	0	.
chr10	129070447	129070448	chr10:129070448:T:C	rs12412525	T	C	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr10	129103475	129103476	chr10:129103476:C:G	rs12772671	C	G	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr10	129131778	129131779	chr10:129131779:A:G	rs12247433	A	G	A	Sox2_MA0143.3	4	1	-	3.5547341015215945	-3.3540206777936254	CCTTTGTA
chr10	129133217	129133218	chr10:129133218:C:T	rs12772010	C	T	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr10	129142783	129142784	chr10:129142784:A:G	rs61859368	A	G	A	Sox2_MA0143.3	6	1	-	9.613475778572903	2.7047209992576837	CCATTGTT
chr10	129152613	129152614	chr10:129152614:G:T	rs874549	G	T	G	Sox2_MA0143.3	26	0	+	0	0	.
chr10	129397494	129397495	chr10:129397495:G:T	rs11016778	G	T	G	Sox2_MA0143.3	10	0	-	0	0	.
chr10	129411291	129411292	chr10:129411292:C:T	rs877430	C	T	C	Sox2_MA0143.3	17	0	-	0	0	.
chr10	129432498	129432499	chr10:129432499:C:T	rs75951581	C	T	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr10	129438156	129438157	chr10:129438157:T:A	chr10:129438157:T:A	T	A	T	Sox2_MA0143.3	19	0	-	0	0	.
chr10	129506750	129506751	chr10:129506751:T:C	rs1556658	T	C	C	Sox2_MA0143.3	6	1	+	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr10	129638296	129638297	chr10:129638297:A:G	rs12247354	A	G	A	Sox2_MA0143.3	-8	0	-	0	0	.
chr10	129644330	129644331	chr10:129644331:T:A	rs7894836	T	A	T	Sox2_MA0143.3	-4	0	-	0	0	.
chr10	129709240	129709241	chr10:129709241:T:C	rs4751113	T	C	C	Sox2_MA0143.3	16	0	-	0	0	.
chr10	129743525	129743526	chr10:129743526:A:G	rs59648203	A	G	A	Sox2_MA0143.3	-13	0	+	0	0	.
chr10	129757378	129757379	chr10:129757379:C:T	chr10:129757379:C:T	C	T	C	Sox2_MA0143.3	26	0	+	0	0	.
chr10	129799629	129799630	chr10:129799630:G:C	rs7099877	G	C	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr10	129844707	129844708	chr10:129844708:C:T	rs776257061	C	T	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr10	129902470	129902471	chr10:129902471:C:T	rs11017007	C	T	T	Sox2_MA0143.3	27	0	-	0	0	.
chr10	129911853	129911854	chr10:129911854:G:A	rs140611380	G	A	G	Sox2_MA0143.3	22	0	-	0	0	.
chr10	129934723	129934724	chr10:129934724:T:C	rs1984104	T	C	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr10	129934812	129934813	chr10:129934813:C:T	rs1984103	C	T	C	Sox2_MA0143.3	5	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr10	129934823	129934824	chr10:129934824:G:A	rs138541073	G	A	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr10	129940075	129940076	chr10:129940076:T:C	rs57388715	T	C	T	Sox2_MA0143.3	2	1	-	8.676919043985553	2.5582713367092715	CCATTGTG
chr10	129951869	129951870	chr10:129951870:C:T	rs491299	C	T	C	Sox2_MA0143.3	22	0	+	0	0	.
chr10	129953261	129953262	chr10:129953262:T:G	chr10:129953262:T:G	T	G	T	Sox2_MA0143.3	-5	0	-	0	0	.
chr10	129956443	129956444	chr10:129956444:C:T	rs148077364	C	T	C	Sox2_MA0143.3	22	0	+	0	0	.
chr10	130194723	130194724	chr10:130194724:G:A	rs60024617	G	A	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr10	130205538	130205539	chr10:130205539:G:A	rs10764942	G	A	A	Sox2_MA0143.3	5	1	+	9.613475778572903	2.7047209992576837	CCATTGTT
chr10	130242598	130242599	chr10:130242599:T:C	rs1043892293	T	C	T	Sox2_MA0143.3	4	1	+	8.864090315184848	1.9553355358696274	CCTTTGTG
chr10	130364442	130364443	chr10:130364443:G:A	rs997428436	G	A	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr10	130368301	130368302	chr10:130368302:G:A	rs359112	G	A	A	Sox2_MA0143.3	11	0	+	0	0	.
chr10	130425473	130425474	chr10:130425474:A:C	rs79417789	A	C	C	Sox2_MA0143.3	10	0	+	0	0	.
chr10	130427859	130427860	chr10:130427860:C:G	rs11017249	C	G	C	Sox2_MA0143.3	7	1	-	8.676919043985553	9.019595766176417	CCATTGTG
chr10	130427864	130427865	chr10:130427865:T:C	rs359108	T	C	T	Sox2_MA0143.3	2	1	-	8.676919043985553	2.5582713367092715	CCATTGTG
chr10	130428056	130428057	chr10:130428057:C:G	rs61235448	C	G	C	Sox2_MA0143.3	1	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr10	130474969	130474970	chr10:130474970:G:A	rs74160386	G	A	G	Sox2_MA0143.3	20	0	+	0	0	.
chr10	130479233	130479234	chr10:130479234:T:C	rs74160392	T	C	T	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr10	130480157	130480158	chr10:130480158:C:T	rs408997	C	T	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr10	130480718	130480719	chr10:130480719:C:T	rs763351277	C	T	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr10	130480726	130480727	chr10:130480727:G:C	rs451609	G	C	G	Sox2_MA0143.3	-3	0	+	0	0	.
chr10	130544942	130544943	chr10:130544943:T:C	rs915205	T	C	C	Sox2_MA0143.3	-5	0	-	0	0	.
chr10	130647765	130647766	chr10:130647766:A:G	rs72848811	A	G	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr10	130661606	130661607	chr10:130661607:C:T	rs1702204	C	T	C	Sox2_MA0143.3	-5	0	-	0	0	.
chr10	130715187	130715188	chr10:130715188:A:G	rs12221346	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr10	130739930	130739931	chr10:130739931:G:A	rs1876319	G	A	g	Sox2_MA0143.3	-20	0	-	0	0	.
chr10	130750712	130750713	chr10:130750713:C:G	rs7068090	C	G	C	Sox2_MA0143.3	18	0	-	0	0	.
chr10	130792706	130792707	chr10:130792707:A:G	rs7917491	A	G	G	Sox2_MA0143.3	2	1	-	8.864090315184848	2.5582713367092715	CCTTTGTG
chr10	130804761	130804762	chr10:130804762:T:C	rs1703650	T	C	C	Sox2_MA0143.3	23	0	+	0	0	.
chr10	130806678	130806679	chr10:130806679:T:C	rs1655170	T	C	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr10	130867312	130867313	chr10:130867313:G:A	rs1655144	G	A	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr10	130896062	130896063	chr10:130896063:G:A	rs2397393	G	A	G	Sox2_MA0143.3	22	0	+	0	0	.
chr10	130902937	130902938	chr10:130902938:T:A	rs12357494	T	A	T	Sox2_MA0143.3	-10	0	+	0	0	.
chr10	130913377	130913378	chr10:130913378:A:G	rs1655093	A	G	G	Sox2_MA0143.3	12	0	-	0	0	.
chr10	130924105	130924106	chr10:130924106:C:T	rs5010908	C	T	T	Sox2_MA0143.3	-4	0	-	0	0	.
chr10	130925989	130925990	chr10:130925990:C:T	rs12767330	C	T	c	Sox2_MA0143.3	0	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr10	130936724	130936725	chr10:130936725:C:T	rs1655103	C	T	T	Sox2_MA0143.3	22	0	-	0	0	.
chr10	130969722	130969723	chr10:130969723:C:A	rs7896714	C	A	C	Sox2_MA0143.3	25	0	-	0	0	.
chr10	131004179	131004180	chr10:131004180:C:T	rs369795869	C	T	C	Sox2_MA0143.3	5	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr10	131007015	131007016	chr10:131007016:T:C	rs10829872	T	C	C	Sox2_MA0143.3	4	1	+	3.5547341015215945	-3.3540206777936254	CCTTTGTA
chr10	131013813	131013814	chr10:131013814:T:G	rs11017654	T	G	T	Sox2_MA0143.3	11	0	+	0	0	.
chr10	131017561	131017562	chr10:131017562:G:A	rs7072306	G	A	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr10	131017579	131017580	chr10:131017580:C:T	rs7073330	C	T	C	Sox2_MA0143.3	1	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr10	131047430	131047431	chr10:131047431:T:G	rs1891800	T	G	G	Sox2_MA0143.3	-12	0	+	0	0	.
chr10	131071250	131071251	chr10:131071251:T:G	rs4751314	T	G	T	Sox2_MA0143.3	14	0	-	0	0	.
chr10	131075880	131075881	chr10:131075881:G:A	rs117316278	G	A	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr10	131088792	131088793	chr10:131088793:G:A	rs75923096	G	A	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr10	131096580	131096581	chr10:131096581:A:G	rs7073264	A	G	A	Sox2_MA0143.3	-17	0	-	0	0	.
chr10	131145903	131145904	chr10:131145904:C:T	rs11017755	C	T	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr10	131145936	131145937	chr10:131145937:C:T	rs11017756	C	T	C	Sox2_MA0143.3	23	0	+	0	0	.
chr10	131206044	131206045	chr10:131206045:A:G	rs2918127	A	G	G	Sox2_MA0143.3	14	0	+	0	0	.
chr10	131206046	131206047	chr10:131206047:T:C	rs2944482	T	C	C	Sox2_MA0143.3	16	0	+	0	0	.
chr10	131214923	131214924	chr10:131214924:T:C	rs893507	T	C	T	Sox2_MA0143.3	3	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr10	131219519	131219520	chr10:131219520:G:T	rs72841326	G	T	G	Sox2_MA0143.3	26	0	-	0	0	.
chr10	131245824	131245825	chr10:131245825:G:A	rs2196742	G	A	G	Sox2_MA0143.3	27	0	+	0	0	.
chr10	131270827	131270828	chr10:131270828:C:T	rs184451069	C	T	C	Sox2_MA0143.3	-5	0	-	0	0	.
chr10	131326697	131326698	chr10:131326698:A:G	rs4609515	A	G	A	Sox2_MA0143.3	9	0	-	0	0	.
chr10	131352143	131352144	chr10:131352144:T:C	rs7084372	T	C	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr10	131391907	131391908	chr10:131391908:A:C	rs7079127	A	C	A	Sox2_MA0143.3	14	0	+	0	0	.
chr10	131392139	131392140	chr10:131392140:T:C	rs7083188	T	C	C	Sox2_MA0143.3	15	0	-	0	0	.
chr10	131396146	131396147	chr10:131396147:T:C	rs7893895	T	C	T	Sox2_MA0143.3	10	0	-	0	0	.
chr10	131457357	131457358	chr10:131457358:A:T	rs117694983	A	T	A	Sox2_MA0143.3	-18	0	-	0	0	.
chr10	131516751	131516752	chr10:131516752:C:T	rs4751404	C	T	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr10	131560315	131560316	chr10:131560316:G:A	rs79770400	G	A	A	Sox2_MA0143.3	-10	0	-	0	0	.
chr10	131639165	131639166	chr10:131639166:T:C	rs12572860	T	C	C	Sox2_MA0143.3	18	0	+	0	0	.
chr10	131712833	131712834	chr10:131712834:C:T	rs7075233	C	T	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr10	131790402	131790403	chr10:131790403:A:T	rs7907077	A	T	A	Sox2_MA0143.3	-8	0	+	0	0	.
chr10	131790429	131790430	chr10:131790430:C:T	rs72853779	C	T	C	Sox2_MA0143.3	19	0	+	0	0	.
chr10	131820428	131820429	chr10:131820429:T:C	rs4897798	T	C	T	Sox2_MA0143.3	8	0	+	0	0	.
chr10	131862637	131862638	chr10:131862638:C:T	rs1243036516	C	T	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr10	131862665	131862666	chr10:131862666:T:G	rs1417403877	T	G	t	Sox2_MA0143.3	25	0	+	0	0	.
chr10	131879850	131879851	chr10:131879851:C:G	rs879041584	C	G	G	Sox2_MA0143.3	21	0	-	0	0	.
chr10	131879854	131879855	chr10:131879855:A:G	rs879196825	A	G	G	Sox2_MA0143.3	17	0	-	0	0	.
chr10	131901743	131901744	chr10:131901744:C:T	rs888404270	C	T	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr10	131943614	131943615	chr10:131943615:C:T	rs978856088	C	T	C	Sox2_MA0143.3	-20	0	-	0	0	.
chr10	131975881	131975882	chr10:131975882:C:G	rs3829156	C	G	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr10	132015396	132015397	chr10:132015397:G:A	rs146770969	G	A	G	Sox2_MA0143.3	8	0	-	0	0	.
chr10	132069905	132069906	chr10:132069906:C:T	rs11146144	C	T	C	Sox2_MA0143.3	5	1	-	8.676919043985553	1.7681642646703324	CCATTGTG
chr10	132069921	132069922	chr10:132069922:G:A	rs2026123	G	A	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr10	132151810	132151811	chr10:132151811:C:T	rs61864447	C	T	C	Sox2_MA0143.3	14	0	+	0	0	.
chr10	132154265	132154266	chr10:132154266:A:G	rs6560685	A	G	G	Sox2_MA0143.3	19	0	+	0	0	.
chr10	132158944	132158945	chr10:132158945:G:T	rs71512279	G	T	-	Sox2_MA0143.3	18	0	+	0	0	.
chr10	132165416	132165417	chr10:132165417:C:A	rs758574482	C	A	C	Sox2_MA0143.3	1	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr10	132263434	132263435	chr10:132263435:C:T	rs12769606	C	T	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr10	132278998	132278999	chr10:132278999:C:T	rs7078667	C	T	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr10	132320700	132320701	chr10:132320701:C:T	rs34735249	C	T	T	Sox2_MA0143.3	13	0	+	0	0	.
chr10	132407498	132407499	chr10:132407499:G:A	rs899189622	G	A	G	Sox2_MA0143.3	26	0	+	0	0	.
chr10	132513936	132513937	chr10:132513937:T:A	rs4503455	T	A	A	Sox2_MA0143.3	4	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr10	132572224	132572225	chr10:132572225:C:T	rs183193314	C	T	C	Sox2_MA0143.3	23	0	+	0	0	.
chr10	132585621	132585622	chr10:132585622:A:G	rs2814446	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr10	132603151	132603152	chr10:132603152:G:A	rs35253505	G	A	G	Sox2_MA0143.3	12	0	-	0	0	.
chr10	132794205	132794206	chr10:132794206:A:G	rs2804010	A	G	G	Sox2_MA0143.3	4	1	-	8.676919043985553	1.7681642646703322	CCATTGTG
chr10	132834529	132834530	chr10:132834530:C:T	rs11146535	C	T	C	Sox2_MA0143.3	19	0	-	0	0	.
chr10	132834543	132834544	chr10:132834544:C:T	rs3793688	C	T	C	Sox2_MA0143.3	5	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr10	132883682	132883683	chr10:132883683:C:T	rs188392041	C	T	C	Sox2_MA0143.3	20	0	-	0	0	.
chr10	132883697	132883698	chr10:132883698:C:T	rs150508352	C	T	T	Sox2_MA0143.3	5	1	-	9.019595766176417	2.110840986861197	CCATTGTC
chr10	132895178	132895179	chr10:132895179:G:A	rs4320880	G	A	G	Sox2_MA0143.3	24	0	-	0	0	.
chr10	132904188	132904189	chr10:132904189:C:T	rs115689614	C	T	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr10	132932930	132932931	chr10:132932931:T:C	rs116895640	T	C	T	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr10	132962689	132962690	chr10:132962690:C:T	rs12267935	C	T	T	Sox2_MA0143.3	0	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr10	132986980	132986981	chr10:132986981:G:A	rs75504417	G	A	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr10	133027769	133027770	chr10:133027770:A:G	rs72856809	A	G	A	Sox2_MA0143.3	-1	0	+	0	0	.
chr10	133049660	133049661	chr10:133049661:A:G	rs6537591	A	G	G	Sox2_MA0143.3	20	0	-	0	0	.
chr10	133151790	133151791	chr10:133151791:C:T	rs10857673	C	T	C	Sox2_MA0143.3	17	0	+	0	0	.
chr10	133238743	133238744	chr10:133238744:G:C	rs188701015	G	C	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr10	133254752	133254753	chr10:133254753:T:C	rs3008307	T	C	C	Sox2_MA0143.3	17	0	+	0	0	.
chr10	133273171	133273172	chr10:133273172:A:G	rs3008325	A	G	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr10	133399350	133399351	chr10:133399351:C:G	rs191186311	C	G	c	Sox2_MA0143.3	12	0	+	0	0	.
chr10	133445317	133445318	chr10:133445318:G:A	rs1242288181	G	A	G	Sox2_MA0143.3	27	0	-	0	0	.
chr10	133556500	133556501	chr10:133556501:T:C	rs12257368	T	C	T	Sox2_MA0143.3	4	1	+	8.864090315184848	1.9553355358696274	CCTTTGTG
chr10	133557757	133557758	chr10:133557758:G:C	rs8181294	G	C	G	Sox2_MA0143.3	10	0	+	0	0	.
chr10	133560086	133560087	chr10:133560087:C:T	rs3813873	C	T	T	Sox2_MA0143.3	-8	0	-	0	0	.
chr11	284092	284093	chr11:284093:A:G	rs9734280	A	G	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr11	284093	284094	chr11:284094:G:T	rs78086324	G	T	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr11	288002	288003	chr11:288003:T:G	rs10751645	T	G	G	Sox2_MA0143.3	17	0	-	0	0	.
chr11	288024	288025	chr11:288025:A:G	rs77148875	A	G	A	Sox2_MA0143.3	-5	0	-	0	0	.
chr11	295526	295527	chr11:295527:T:C	rs1060819	T	C	C	Sox2_MA0143.3	3	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr11	322721	322722	chr11:322722:C:T	rs10794307	C	T	c	Sox2_MA0143.3	16	0	-	0	0	.
chr11	368332	368333	chr11:368333:A:G	rs192254656	A	G	A	Sox2_MA0143.3	2	1	+	8.676919043985553	2.5582713367092715	CCATTGTG
chr11	403544	403545	chr11:403545:C:T	rs35828848	C	T	C	Sox2_MA0143.3	0	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr11	409719	409720	chr11:409720:T:G	rs6598024	T	G	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr11	409765	409766	chr11:409766:C:A	rs111715314	C	A	C	Sox2_MA0143.3	27	0	+	0	0	.
chr11	439262	439263	chr11:439263:C:G	rs72848743	C	G	C	Sox2_MA0143.3	17	0	+	0	0	.
chr11	553532	553533	chr11:553533:A:G	rs12360657	A	G	a	Sox2_MA0143.3	20	0	-	0	0	.
chr11	565839	565840	chr11:565840:C:T	rs1056812	C	T	C	Sox2_MA0143.3	17	0	-	0	0	.
chr11	565871	565872	chr11:565872:G:T	rs1610160	G	T	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr11	565872	565873	chr11:565873:G:A	rs3088205	G	A	A	Sox2_MA0143.3	-16	0	-	0	0	.
chr11	566392	566393	chr11:566393:C:G	rs3740650	C	G	C	Sox2_MA0143.3	16	0	-	0	0	.
chr11	595809	595810	chr11:595810:A:G	rs7122021	A	G	A	Sox2_MA0143.3	-7	0	+	0	0	.
chr11	648250	648251	chr11:648251:G:C	rs10794329	G	C	G	Sox2_MA0143.3	25	0	+	0	0	.
chr11	699917	699918	chr11:699918:G:A	rs74464179	G	A	G	Sox2_MA0143.3	24	0	-	0	0	.
chr11	797764	797765	chr11:797765:G:A	rs1020913027	G	A	G	Sox2_MA0143.3	8	0	-	0	0	.
chr11	862666	862667	chr11:862667:G:A	rs114423748	G	A	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr11	863378	863379	chr11:863379:C:T	rs187647589	C	T	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr11	887457	887458	chr11:887458:G:T	rs61869683	G	T	G	Sox2_MA0143.3	7	1	+	8.864090315184848	9.800647049772198	CCTTTGTG
chr11	915395	915396	chr11:915396:G:T	rs145125953	G	T	G	Sox2_MA0143.3	5	1	+	8.676919043985553	1.7681642646703324	CCATTGTG
chr11	934806	934807	chr11:934807:G:A	rs114083447	G	A	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr11	944800	944801	chr11:944801:C:A	rs10902237	C	A	C	Sox2_MA0143.3	19	0	+	0	0	.
chr11	944808	944809	chr11:944809:C:T	rs115522455	C	T	C	Sox2_MA0143.3	27	0	+	0	0	.
chr11	1083580	1083581	chr11:1083581:G:A	rs12416873	G	A	A	Sox2_MA0143.3	15	0	-	0	0	.
chr11	1219774	1219775	chr11:1219775:T:C	rs2672794	T	C	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr11	1221068	1221069	chr11:1221069:T:G	rs12804004	T	G	T	Sox2_MA0143.3	27	0	-	0	0	.
chr11	1363458	1363459	chr11:1363459:T:C	rs72849425	T	C	t	Sox2_MA0143.3	-16	0	+	0	0	.
chr11	1383540	1383541	chr11:1383541:A:C	rs901628043	A	C	a	Sox2_MA0143.3	-3	0	-	0	0	.
chr11	1383541	1383542	chr11:1383542:C:A	rs544605632	C	A	c	Sox2_MA0143.3	-4	0	-	0	0	.
chr11	1391205	1391206	chr11:1391206:A:G	rs61867609	A	G	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr11	1398180	1398181	chr11:1398181:A:G	rs10766599	A	G	A	Sox2_MA0143.3	22	0	+	0	0	.
chr11	1422611	1422612	chr11:1422612:C:T	rs61868968	C	T	c	Sox2_MA0143.3	-12	0	-	0	0	.
chr11	1500457	1500458	chr11:1500458:T:C	rs7128668	T	C	T	Sox2_MA0143.3	-7	0	+	0	0	.
chr11	1500894	1500895	chr11:1500895:C:T	rs74760554	C	T	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr11	1513474	1513475	chr11:1513475:C:T	rs983755248	C	T	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr11	1533364	1533365	chr11:1533365:G:A	rs11032231	G	A	G	Sox2_MA0143.3	15	0	-	0	0	.
chr11	1608712	1608713	chr11:1608713:T:G	rs7108918	T	G	N	Sox2_MA0143.3	-19	0	+	0	0	.
chr11	1608739	1608740	chr11:1608740:C:T	rs34365502	C	T	c	Sox2_MA0143.3	8	0	+	0	0	.
chr11	1612564	1612565	chr11:1612565:G:A	rs10768677	G	A	N	Sox2_MA0143.3	18	0	-	0	0	.
chr11	1612567	1612568	chr11:1612568:C:T	rs78029588	C	T	c	Sox2_MA0143.3	15	0	-	0	0	.
chr11	1632214	1632215	chr11:1632215:C:T	rs902219	C	T	C	Sox2_MA0143.3	25	0	+	0	0	.
chr11	1639319	1639320	chr11:1639320:T:C	rs1396944166	T	C	t	Sox2_MA0143.3	-9	0	-	0	0	.
chr11	1660028	1660029	chr11:1660029:A:G	rs7101671	A	G	N	Sox2_MA0143.3	4	1	-	8.864090315184848	1.9553355358696274	CCTTTGTG
chr11	1685410	1685411	chr11:1685411:T:G	rs28670640	T	G	G	Sox2_MA0143.3	20	0	+	0	0	.
chr11	1695475	1695476	chr11:1695476:G:A	rs73404773	G	A	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr11	1695518	1695519	chr11:1695519:T:C	rs16927507	T	C	T	Sox2_MA0143.3	25	0	+	0	0	.
chr11	1715282	1715283	chr11:1715283:G:A	rs78001600	G	A	G	Sox2_MA0143.3	18	0	-	0	0	.
chr11	1732704	1732705	chr11:1732705:C:T	rs7121544	C	T	C	Sox2_MA0143.3	1	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr11	1783186	1783187	chr11:1783187:C:T	rs16927565	C	T	C	Sox2_MA0143.3	12	0	+	0	0	.
chr11	1783200	1783201	chr11:1783201:T:C	rs1320296	T	C	T	Sox2_MA0143.3	26	0	+	0	0	.
chr11	1801994	1801995	chr11:1801995:G:T	rs10743008	G	T	g	Sox2_MA0143.3	10	0	-	0	0	.
chr11	1870088	1870089	chr11:1870089:C:T	rs61868778	C	T	C	Sox2_MA0143.3	12	0	+	0	0	.
chr11	2119024	2119025	chr11:2119025:A:G	rs7115054	A	G	G	Sox2_MA0143.3	12	0	+	0	0	.
chr11	2133951	2133952	chr11:2133952:C:G	rs113257255	C	G	C	Sox2_MA0143.3	25	0	-	0	0	.
chr11	2134753	2134754	chr11:2134754:C:G	rs3213228	C	G	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr11	2148912	2148913	chr11:2148913:G:A	rs1004446	G	A	A	Sox2_MA0143.3	19	0	-	0	0	.
chr11	2151759	2151760	chr11:2151760:C:G	chr11:2151760:C:G	C	G	C	Sox2_MA0143.3	15	0	+	0	0	.
chr11	2199073	2199074	chr11:2199074:G:A	rs4075003	G	A	G	Sox2_MA0143.3	25	0	+	0	0	.
chr11	2211322	2211323	chr11:2211323:T:G	rs12419620	T	G	T	Sox2_MA0143.3	-12	0	+	0	0	.
chr11	2219984	2219985	chr11:2219985:A:G	rs11606404	A	G	G	Sox2_MA0143.3	25	0	+	0	0	.
chr11	2220041	2220042	chr11:2220042:T:C	rs11021732	T	C	T	Sox2_MA0143.3	-10	0	-	0	0	.
chr11	2336137	2336138	chr11:2336138:C:T	rs74050360	C	T	C	Sox2_MA0143.3	18	0	+	0	0	.
chr11	2347752	2347753	chr11:2347753:G:A	rs800146	G	A	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr11	2448381	2448382	chr11:2448382:G:A	rs537881230	G	A	G	Sox2_MA0143.3	22	0	-	0	0	.
chr11	2472729	2472730	chr11:2472730:A:C	rs11604486	A	C	C	Sox2_MA0143.3	2	1	+	9.019595766176417	2.900948058900136	CCATTGTC
chr11	2472735	2472736	chr11:2472736:A:C	rs11604487	A	C	A	Sox2_MA0143.3	8	0	+	0	0	.
chr11	2519934	2519935	chr11:2519935:T:C	rs11826873	T	C	T	Sox2_MA0143.3	10	0	-	0	0	.
chr11	2519941	2519942	chr11:2519942:A:G	rs72847656	A	G	a	Sox2_MA0143.3	3	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr11	2538696	2538697	chr11:2538697:C:T	rs576308679	C	T	C	Sox2_MA0143.3	25	0	-	0	0	.
chr11	2538715	2538716	chr11:2538716:A:G	rs72847676	A	G	A	Sox2_MA0143.3	6	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr11	2562336	2562337	chr11:2562337:G:C	rs922979530	G	C	G	Sox2_MA0143.3	8	0	-	0	0	.
chr11	2562362	2562363	chr11:2562363:A:C	rs192633340	A	C	A	Sox2_MA0143.3	-18	0	-	0	0	.
chr11	2569720	2569721	chr11:2569721:T:A	rs76003132	T	A	T	Sox2_MA0143.3	16	0	-	0	0	.
chr11	2591443	2591444	chr11:2591444:C:G	rs545007927	C	G	C	Sox2_MA0143.3	10	0	-	0	0	.
chr11	2591466	2591467	chr11:2591467:A:T	rs2283176	A	T	A	Sox2_MA0143.3	-13	0	-	0	0	.
chr11	2593203	2593204	chr11:2593204:G:A	rs143698799	G	A	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr11	2673375	2673376	chr11:2673376:C:A	rs231359	C	A	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr11	2691055	2691056	chr11:2691056:A:G	rs7939976	A	G	A	Sox2_MA0143.3	-13	0	+	0	0	.
chr11	2702373	2702374	chr11:2702374:G:T	rs231841	G	T	T	Sox2_MA0143.3	13	0	+	0	0	.
chr11	2735997	2735998	chr11:2735998:T:G	rs72844254	T	G	T	Sox2_MA0143.3	11	0	-	0	0	.
chr11	2745003	2745004	chr11:2745004:G:A	rs2237877	G	A	G	Sox2_MA0143.3	12	0	-	0	0	.
chr11	2745016	2745017	chr11:2745017:C:T	rs76596198	C	T	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr11	2766573	2766574	chr11:2766574:A:G	rs67004488	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr11	2769977	2769978	chr11:2769978:G:A	rs2237882	G	A	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr11	2770018	2770019	chr11:2770019:C:T	rs540458555	C	T	C	Sox2_MA0143.3	23	0	+	0	0	.
chr11	2833283	2833284	chr11:2833284:C:G	rs234862	C	G	G	Sox2_MA0143.3	7	1	-	8.676919043985553	9.019595766176417	CCATTGTG
chr11	2868197	2868198	chr11:2868198:C:T	rs55688299	C	T	C	Sox2_MA0143.3	0	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr11	2917930	2917931	chr11:2917931:G:A	rs67709661	G	A	G	Sox2_MA0143.3	23	0	-	0	0	.
chr11	2961216	2961217	chr11:2961217:C:T	rs7129174	C	T	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr11	2994341	2994342	chr11:2994342:A:T	rs12276060	A	T	A	Sox2_MA0143.3	-3	0	-	0	0	.
chr11	2995289	2995290	chr11:2995290:G:A	rs739400	G	A	G	Sox2_MA0143.3	13	0	-	0	0	.
chr11	3037471	3037472	chr11:3037472:G:A	rs1025071078	G	A	G	Sox2_MA0143.3	8	0	-	0	0	.
chr11	3037484	3037485	chr11:3037485:G:A	rs139896054	G	A	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr11	3056759	3056760	chr11:3056760:C:T	rs420127	C	T	C	Sox2_MA0143.3	13	0	+	0	0	.
chr11	3130390	3130391	chr11:3130391:G:A	rs75427620	G	A	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr11	3160808	3160809	chr11:3160809:T:C	rs765695837	T	C	T	Sox2_MA0143.3	25	0	-	0	0	.
chr11	3162594	3162595	chr11:3162595:C:T	rs117276483	C	T	C	Sox2_MA0143.3	21	0	+	0	0	.
chr11	3208370	3208371	chr11:3208371:A:G	rs72848245	A	G	A	Sox2_MA0143.3	-16	0	+	0	0	.
chr11	3208391	3208392	chr11:3208392:G:T	rs71478507	G	T	G	Sox2_MA0143.3	5	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr11	3341576	3341577	chr11:3341577:C:T	rs138094938	C	T	T	Sox2_MA0143.3	5	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr11	3341581	3341582	chr11:3341582:G:A	rs149449739	G	A	G	Sox2_MA0143.3	0	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr11	3341587	3341588	chr11:3341588:A:G	rs143886939	A	G	A	Sox2_MA0143.3	3	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr11	3379288	3379289	chr11:3379289:A:G	rs547177795	A	G	A	Sox2_MA0143.3	21	0	-	0	0	.
chr11	3379307	3379308	chr11:3379308:T:C	rs1030359415	T	C	T	Sox2_MA0143.3	2	1	-	9.019595766176417	2.900948058900136	CCATTGTC
chr11	3379318	3379319	chr11:3379319:A:C	rs9667847	A	C	A	Sox2_MA0143.3	-9	0	-	0	0	.
chr11	3397596	3397597	chr11:3397597:G:A	rs61877996	G	A	-	Sox2_MA0143.3	15	0	-	0	0	.
chr11	3478398	3478399	chr11:3478399:C:T	rs11604878	C	T	-	Sox2_MA0143.3	27	0	+	0	0	.
chr11	3499517	3499518	chr11:3499518:C:T	rs11027697	C	T	N	Sox2_MA0143.3	11	0	+	0	0	.
chr11	3511516	3511517	chr11:3511517:C:T	rs7927018	C	T	-	Sox2_MA0143.3	20	0	-	0	0	.
chr11	3591900	3591901	chr11:3591901:C:T	rs2032433	C	T	N	Sox2_MA0143.3	-2	0	-	0	0	.
chr11	3616672	3616673	chr11:3616673:G:T	rs11028523	G	T	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr11	3634848	3634849	chr11:3634849:C:G	rs12422183	C	G	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr11	3701073	3701074	chr11:3701074:T:C	rs685782	T	C	T	Sox2_MA0143.3	-18	0	-	0	0	.
chr11	3723273	3723274	chr11:3723274:G:A	rs61751338	G	A	G	Sox2_MA0143.3	20	0	-	0	0	.
chr11	3854248	3854249	chr11:3854249:G:A	rs112807206	G	A	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr11	3878902	3878903	chr11:3878903:T:C	rs10835232	T	C	C	Sox2_MA0143.3	14	0	+	0	0	.
chr11	3997388	3997389	chr11:3997389:C:T	rs4910590	C	T	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr11	4045213	4045214	chr11:4045214:C:A	chr11:4045214:C:A	C	A	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr11	4095924	4095925	chr11:4095925:T:C	rs1662172	T	C	T	Sox2_MA0143.3	2	1	+	9.800647049772198	3.494828071296623	CCTTTGTT
chr11	4193202	4193203	chr11:4193203:C:T	rs528027264	C	T	C	Sox2_MA0143.3	20	0	-	0	0	.
chr11	4637690	4637691	chr11:4637691:G:C	rs1394715	G	C	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr11	4657968	4657969	chr11:4657969:G:A	rs12286022	G	A	G	Sox2_MA0143.3	27	0	-	0	0	.
chr11	4658941	4658942	chr11:4658942:A:T	rs9651649	A	T	A	Sox2_MA0143.3	7	1	-	9.800647049772198	3.5547341015215945	CCTTTGTT
chr11	4713423	4713424	chr11:4713424:G:C	rs7942954	G	C	G	Sox2_MA0143.3	-5	0	+	0	0	.
chr11	4830124	4830125	chr11:4830125:A:G	rs7934332	A	G	G	Sox2_MA0143.3	14	0	-	0	0	.
chr11	4864317	4864318	chr11:4864318:G:C	rs2196122	G	C	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr11	5287665	5287666	chr11:5287666:G:A	rs11036635	G	A	G	Sox2_MA0143.3	18	0	-	0	0	.
chr11	5361859	5361860	chr11:5361860:G:A	rs2736554	G	A	G	Sox2_MA0143.3	17	0	+	0	0	.
chr11	5382829	5382830	chr11:5382830:A:C	rs2647549	A	C	C	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr11	5383723	5383724	chr11:5383724:G:C	rs2647552	G	C	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr11	5454366	5454367	chr11:5454367:C:T	rs11037503	C	T	C	Sox2_MA0143.3	13	0	-	0	0	.
chr11	5468951	5468952	chr11:5468952:C:T	rs17297010	C	T	C	Sox2_MA0143.3	25	0	-	0	0	.
chr11	5525359	5525360	chr11:5525360:G:C	rs10160673	G	C	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr11	5557112	5557113	chr11:5557113:A:G	rs1541941	A	G	A	Sox2_MA0143.3	-18	0	+	0	0	.
chr11	5643743	5643744	chr11:5643744:T:C	rs7109861	T	C	t	Sox2_MA0143.3	9	0	+	0	0	.
chr11	5680050	5680051	chr11:5680051:G:A	rs3740996	G	A	G	Sox2_MA0143.3	25	0	+	0	0	.
chr11	5685052	5685053	chr11:5685053:A:G	rs16934386	A	G	A	Sox2_MA0143.3	-10	0	-	0	0	.
chr11	5685055	5685056	chr11:5685056:G:C	rs56722724	G	C	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr11	5685061	5685062	chr11:5685062:G:A	rs555308283	G	A	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr11	5685062	5685063	chr11:5685063:C:G	rs186630161	C	G	C	Sox2_MA0143.3	-20	0	-	0	0	.
chr11	5738100	5738101	chr11:5738101:C:T	rs77499372	C	T	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr11	5804242	5804243	chr11:5804243:G:A	rs10769238	G	A	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr11	5910530	5910531	chr11:5910531:T:C	rs2100397	T	C	T	Sox2_MA0143.3	4	1	+	9.206767037375712	2.2980122580604916	CCTTTGTC
chr11	5934771	5934772	chr11:5934772:G:C	rs11039723	G	C	-	Sox2_MA0143.3	-18	0	-	0	0	.
chr11	6012544	6012545	chr11:6012545:G:A	rs11040283	G	A	g	Sox2_MA0143.3	21	0	+	0	0	.
chr11	6067593	6067594	chr11:6067594:G:A	rs7931072	G	A	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr11	6096295	6096296	chr11:6096296:C:T	rs4758385	C	T	T	Sox2_MA0143.3	-18	0	-	0	0	.
chr11	6099904	6099905	chr11:6099905:C:T	rs10839510	C	T	c	Sox2_MA0143.3	19	0	-	0	0	.
chr11	6226078	6226079	chr11:6226079:G:A	rs921288320	G	A	G	Sox2_MA0143.3	26	0	-	0	0	.
chr11	6282195	6282196	chr11:6282196:G:A	rs35315077	G	A	G	Sox2_MA0143.3	-14	0	+	0	0	.
chr11	6285325	6285326	chr11:6285326:T:C	rs193100076	T	C	T	Sox2_MA0143.3	11	0	-	0	0	.
chr11	6390179	6390180	chr11:6390180:G:C	rs368505699	G	C	G	Sox2_MA0143.3	1	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr11	6404451	6404452	chr11:6404452:C:T	rs3937838	C	T	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr11	6411643	6411644	chr11:6411644:C:A	rs79811238	C	A	C	Sox2_MA0143.3	18	0	-	0	0	.
chr11	6443681	6443682	chr11:6443682:C:T	rs10500672	C	T	T	Sox2_MA0143.3	-3	0	+	0	0	.
chr11	6454075	6454076	chr11:6454076:C:T	rs140345752	C	T	C	Sox2_MA0143.3	17	0	-	0	0	.
chr11	6488510	6488511	chr11:6488511:C:G	rs2555163	C	G	G	Sox2_MA0143.3	22	0	+	0	0	.
chr11	6602687	6602688	chr11:6602688:G:A	rs11606458	G	A	G	Sox2_MA0143.3	7	1	-	9.019595766176417	9.613475778572903	CCATTGTC
chr11	6602692	6602693	chr11:6602693:T:C	rs80354404	T	C	T	Sox2_MA0143.3	2	1	-	9.019595766176417	2.900948058900136	CCATTGTC
chr11	6682532	6682533	chr11:6682533:T:G	rs7107519	T	G	G	Sox2_MA0143.3	19	0	-	0	0	.
chr11	6848357	6848358	chr11:6848358:A:C	rs2595443	A	C	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr11	6859310	6859311	chr11:6859311:C:T	rs2595464	C	T	c	Sox2_MA0143.3	-17	0	+	0	0	.
chr11	6859323	6859324	chr11:6859324:T:A	rs2595463	T	A	t	Sox2_MA0143.3	-4	0	+	0	0	.
chr11	7015978	7015979	chr11:7015979:G:A	rs10839689	G	A	A	Sox2_MA0143.3	-20	0	-	0	0	.
chr11	7019508	7019509	chr11:7019509:A:G	rs10769752	A	G	A	Sox2_MA0143.3	15	0	+	0	0	.
chr11	7422821	7422822	chr11:7422822:T:C	rs1320043	T	C	T	Sox2_MA0143.3	10	0	-	0	0	.
chr11	7447820	7447821	chr11:7447821:G:A	rs7110975	G	A	g	Sox2_MA0143.3	-1	0	+	0	0	.
chr11	7487649	7487650	chr11:7487650:C:T	rs11041417	C	T	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr11	7537994	7537995	chr11:7537995:C:G	rs10839799	C	G	C	Sox2_MA0143.3	5	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr11	7572052	7572053	chr11:7572053:G:A	rs374490185	G	A	G	Sox2_MA0143.3	1	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr11	7573610	7573611	chr11:7573611:A:G	rs190743962	A	G	A	Sox2_MA0143.3	15	0	+	0	0	.
chr11	7597721	7597722	chr11:7597722:G:A	rs4758203	G	A	G	Sox2_MA0143.3	-9	0	+	0	0	.
chr11	7641129	7641130	chr11:7641130:C:T	rs10839829	C	T	C	Sox2_MA0143.3	25	0	+	0	0	.
chr11	7669135	7669136	chr11:7669136:C:G	rs7131416	C	G	C	Sox2_MA0143.3	11	0	-	0	0	.
chr11	7669147	7669148	chr11:7669148:A:T	rs574561525	A	T	A	Sox2_MA0143.3	-1	0	-	0	0	.
chr11	7669163	7669164	chr11:7669164:T:G	rs183821192	T	G	T	Sox2_MA0143.3	-17	0	-	0	0	.
chr11	7722871	7722872	chr11:7722872:T:G	rs140321489	T	G	T	Sox2_MA0143.3	3	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr11	7851879	7851880	chr11:7851880:G:A	rs10839887	G	A	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr11	7879538	7879539	chr11:7879539:C:A	rs56003884	C	A	A	Sox2_MA0143.3	-9	0	-	0	0	.
chr11	7893058	7893059	chr11:7893059:T:C	rs12788171	T	C	T	Sox2_MA0143.3	-14	0	+	0	0	.
chr11	7904884	7904885	chr11:7904885:T:C	rs10769848	T	C	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr11	7906301	7906302	chr11:7906302:G:A	chr11:7906302:G:A	G	A	G	Sox2_MA0143.3	8	0	-	0	0	.
chr11	8022373	8022374	chr11:8022374:C:A	rs11606443	C	A	C	Sox2_MA0143.3	0	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr11	8026027	8026028	chr11:8026028:A:G	rs138798276	A	G	A	Sox2_MA0143.3	2	1	+	8.676919043985553	2.5582713367092715	CCATTGTG
chr11	8038512	8038513	chr11:8038513:C:T	rs544828363	C	T	C	Sox2_MA0143.3	8	0	+	0	0	.
chr11	8065367	8065368	chr11:8065368:T:C	rs55961435	T	C	T	Sox2_MA0143.3	9	0	-	0	0	.
chr11	8087867	8087868	chr11:8087868:C:T	rs4623938	C	T	C	Sox2_MA0143.3	27	0	-	0	0	.
chr11	8093685	8093686	chr11:8093686:C:T	rs7948279	C	T	C	Sox2_MA0143.3	18	0	+	0	0	.
chr11	8178365	8178366	chr11:8178366:T:C	rs56275785	T	C	T	Sox2_MA0143.3	12	0	+	0	0	.
chr11	8195605	8195606	chr11:8195606:G:C	rs11041797	G	C	G	Sox2_MA0143.3	19	0	+	0	0	.
chr11	8195606	8195607	chr11:8195607:G:A	rs11041798	G	A	G	Sox2_MA0143.3	20	0	+	0	0	.
chr11	8231305	8231306	chr11:8231306:A:G	rs110419	A	G	A	Sox2_MA0143.3	-11	0	-	0	0	.
chr11	8293948	8293949	chr11:8293949:C:A	rs10160665	C	A	C	Sox2_MA0143.3	17	0	+	0	0	.
chr11	8321298	8321299	chr11:8321299:G:A	rs6578957	G	A	G	Sox2_MA0143.3	20	0	-	0	0	.
chr11	8336340	8336341	chr11:8336341:T:C	rs10769902	T	C	T	Sox2_MA0143.3	2	1	-	9.019595766176417	2.900948058900136	CCATTGTC
chr11	8367218	8367219	chr11:8367219:G:A	rs4491210	G	A	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr11	8383049	8383050	chr11:8383050:G:A	rs77301373	G	A	G	Sox2_MA0143.3	26	0	-	0	0	.
chr11	8545837	8545838	chr11:8545838:C:T	rs11826446	C	T	C	Sox2_MA0143.3	5	1	-	9.613475778572903	2.7047209992576837	CCATTGTT
chr11	8545854	8545855	chr11:8545855:A:C	rs72853474	A	C	A	Sox2_MA0143.3	-12	0	-	0	0	.
chr11	8680594	8680595	chr11:8680595:C:T	rs10840107	C	T	T	Sox2_MA0143.3	-16	0	-	0	0	.
chr11	8681027	8681028	chr11:8681028:C:T	rs117631225	C	T	C	Sox2_MA0143.3	20	0	-	0	0	.
chr11	8745615	8745616	chr11:8745616:C:G	rs78178266	C	G	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr11	8837059	8837060	chr11:8837060:G:A	rs117091554	G	A	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr11	8849213	8849214	chr11:8849214:C:A	rs34152382	C	A	A	Sox2_MA0143.3	-20	0	-	0	0	.
chr11	9003304	9003305	chr11:9003305:G:A	rs66630602	G	A	A	Sox2_MA0143.3	-9	0	-	0	0	.
chr11	9103927	9103928	chr11:9103928:T:C	rs76427695	T	C	T	Sox2_MA0143.3	-10	0	+	0	0	.
chr11	9138975	9138976	chr11:9138976:G:A	rs117344697	G	A	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr11	9261901	9261902	chr11:9261902:C:T	rs7936622	C	T	T	Sox2_MA0143.3	-9	0	-	0	0	.
chr11	9640055	9640056	chr11:9640056:G:A	rs11042454	G	A	G	Sox2_MA0143.3	5	1	+	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr11	9651215	9651216	chr11:9651216:T:C	rs2082807	T	C	C	Sox2_MA0143.3	10	0	+	0	0	.
chr11	9708593	9708594	chr11:9708594:T:G	rs10840291	T	G	T	Sox2_MA0143.3	4	1	+	8.864090315184848	1.9553355358696274	CCTTTGTG
chr11	9711786	9711787	chr11:9711787:G:A	rs1390683	G	A	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr11	9717043	9717044	chr11:9717044:C:T	rs534021042	C	T	C	Sox2_MA0143.3	5	1	-	9.019595766176417	2.110840986861197	CCATTGTC
chr11	9717058	9717059	chr11:9717059:A:C	rs12786236	A	C	A	Sox2_MA0143.3	-10	0	-	0	0	.
chr11	9747515	9747516	chr11:9747516:C:T	rs7113055	C	T	C	Sox2_MA0143.3	19	0	+	0	0	.
chr11	9775332	9775333	chr11:9775333:C:T	rs394315	C	T	T	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr11	9775352	9775353	chr11:9775353:C:T	rs7126913	C	T	C	Sox2_MA0143.3	20	0	+	0	0	.
chr11	9876038	9876039	chr11:9876039:G:A	rs74469856	G	A	A	Sox2_MA0143.3	-15	0	-	0	0	.
chr11	9983496	9983497	chr11:9983497:C:T	rs151168333	C	T	C	Sox2_MA0143.3	19	0	-	0	0	.
chr11	10005995	10005996	chr11:10005996:G:C	rs2896513	G	C	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr11	10247266	10247267	chr11:10247267:C:T	rs7947059	C	T	C	Sox2_MA0143.3	24	0	-	0	0	.
chr11	10298614	10298615	chr11:10298615:G:A	rs61889847	G	A	G	Sox2_MA0143.3	23	0	-	0	0	.
chr11	10333633	10333634	chr11:10333634:G:A	rs7941557	G	A	G	Sox2_MA0143.3	23	0	-	0	0	.
chr11	10352108	10352109	chr11:10352109:G:T	rs950326011	G	T	G	Sox2_MA0143.3	23	0	-	0	0	.
chr11	10408046	10408047	chr11:10408047:C:T	rs75379898	C	T	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr11	10408070	10408071	chr11:10408071:T:C	rs11605983	T	C	C	Sox2_MA0143.3	13	0	+	0	0	.
chr11	10456680	10456681	chr11:10456681:C:T	rs2071020	C	T	C	Sox2_MA0143.3	15	0	-	0	0	.
chr11	10527448	10527449	chr11:10527449:T:C	rs192332760	T	C	T	Sox2_MA0143.3	7	1	-	3.5547341015215945	8.864090315184848	CCTTTGTA
chr11	10641504	10641505	chr11:10641505:C:T	rs7127014	C	T	T	Sox2_MA0143.3	-19	0	+	0	0	.
chr11	10686624	10686625	chr11:10686625:A:G	rs716383	A	G	A	Sox2_MA0143.3	16	0	-	0	0	.
chr11	10693931	10693932	chr11:10693932:A:C	chr11:10693932:A:C	A	C	A	Sox2_MA0143.3	-19	0	-	0	0	.
chr11	10714072	10714073	chr11:10714073:A:C	rs1037031908	A	C	A	Sox2_MA0143.3	-18	0	+	0	0	.
chr11	10742939	10742940	chr11:10742940:C:T	rs12794504	C	T	C	Sox2_MA0143.3	15	0	+	0	0	.
chr11	10809251	10809252	chr11:10809252:C:A	rs996024713	C	A	C	Sox2_MA0143.3	1	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr11	10809272	10809273	chr11:10809273:G:A	rs72854326	G	A	G	Sox2_MA0143.3	22	0	+	0	0	.
chr11	10809275	10809276	chr11:10809276:A:T	rs80165496	A	T	A	Sox2_MA0143.3	25	0	+	0	0	.
chr11	10844191	10844192	chr11:10844192:T:C	rs771374	T	C	C	Sox2_MA0143.3	2	1	-	9.613475778572903	3.494828071296623	CCATTGTT
chr11	10896613	10896614	chr11:10896614:C:T	rs6484537	C	T	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr11	11019526	11019527	chr11:11019527:C:T	rs11043058	C	T	C	Sox2_MA0143.3	13	0	-	0	0	.
chr11	11023663	11023664	chr11:11023664:A:T	rs34501506	A	T	A	Sox2_MA0143.3	-11	0	+	0	0	.
chr11	11039375	11039376	chr11:11039376:T:G	rs10770165	T	G	T	Sox2_MA0143.3	8	0	-	0	0	.
chr11	11108562	11108563	chr11:11108563:C:T	rs11043089	C	T	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr11	11116642	11116643	chr11:11116643:G:A	rs11043102	G	A	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr11	11155778	11155779	chr11:11155779:G:T	rs528575138	G	T	G	Sox2_MA0143.3	23	0	-	0	0	.
chr11	11165330	11165331	chr11:11165331:C:T	rs79094114	C	T	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr11	11186453	11186454	chr11:11186454:G:A	rs543927803	G	A	A	Sox2_MA0143.3	-2	0	-	0	0	.
chr11	11295805	11295806	chr11:11295806:C:T	rs11021763	C	T	T	Sox2_MA0143.3	-10	0	-	0	0	.
chr11	11317305	11317306	chr11:11317306:A:G	rs2632003	A	G	A	Sox2_MA0143.3	-14	0	+	0	0	.
chr11	11358614	11358615	chr11:11358615:C:T	rs141615291	C	T	C	Sox2_MA0143.3	5	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr11	11371720	11371721	chr11:11371721:G:T	rs11021823	G	T	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr11	11381719	11381720	chr11:11381720:C:G	rs12292122	C	G	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr11	11407748	11407749	chr11:11407749:G:A	rs150843423	G	A	G	Sox2_MA0143.3	16	0	-	0	0	.
chr11	11519262	11519263	chr11:11519263:T:C	rs4345960	T	C	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr11	11533867	11533868	chr11:11533868:T:C	rs4243933	T	C	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr11	11537328	11537329	chr11:11537329:C:T	rs4243934	C	T	C	Sox2_MA0143.3	1	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr11	11567238	11567239	chr11:11567239:A:G	rs10765865	A	G	G	Sox2_MA0143.3	-3	0	-	0	0	.
chr11	11567967	11567968	chr11:11567968:C:T	rs185423991	C	T	C	Sox2_MA0143.3	22	0	-	0	0	.
chr11	11568001	11568002	chr11:11568002:T:C	rs118063541	T	C	T	Sox2_MA0143.3	-12	0	-	0	0	.
chr11	11570841	11570842	chr11:11570842:A:G	rs55916244	A	G	A	Sox2_MA0143.3	-6	0	-	0	0	.
chr11	11572896	11572897	chr11:11572897:T:C	rs72853815	T	C	T	Sox2_MA0143.3	2	1	-	9.613475778572903	3.494828071296623	CCATTGTT
chr11	11575463	11575464	chr11:11575464:G:A	rs11602626	G	A	A	Sox2_MA0143.3	-7	0	-	0	0	.
chr11	11582658	11582659	chr11:11582659:C:T	rs11607171	C	T	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr11	11817153	11817154	chr11:11817154:A:T	rs7117323	A	T	T	Sox2_MA0143.3	-11	0	-	0	0	.
chr11	11825198	11825199	chr11:11825199:G:C	rs72854898	G	C	G	Sox2_MA0143.3	11	0	+	0	0	.
chr11	11940741	11940742	chr11:11940742:A:G	rs61871869	A	G	A	Sox2_MA0143.3	-20	0	+	0	0	.
chr11	11993959	11993960	chr11:11993960:A:G	rs140244681	A	G	A	Sox2_MA0143.3	18	0	+	0	0	.
chr11	12004943	12004944	chr11:12004944:G:A	rs116956000	G	A	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr11	12007209	12007210	chr11:12007210:T:A	rs16910349	T	A	T	Sox2_MA0143.3	-20	0	-	0	0	.
chr11	12019464	12019465	chr11:12019465:C:G	rs144610825	C	G	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr11	12019525	12019526	chr11:12019526:C:T	rs113464518	C	T	C	Sox2_MA0143.3	27	0	-	0	0	.
chr11	12118267	12118268	chr11:12118268:C:T	rs7932017	C	T	C	Sox2_MA0143.3	26	0	-	0	0	.
chr11	12118499	12118500	chr11:12118500:A:G	rs10831738	A	G	A	Sox2_MA0143.3	-8	0	+	0	0	.
chr11	12120225	12120226	chr11:12120226:G:T	rs7939041	G	T	T	Sox2_MA0143.3	20	0	+	0	0	.
chr11	12136251	12136252	chr11:12136252:A:C	rs7119131	A	C	A	Sox2_MA0143.3	-4	0	-	0	0	.
chr11	12136266	12136267	chr11:12136267:G:A	rs7102414	G	A	A	Sox2_MA0143.3	-19	0	-	0	0	.
chr11	12150710	12150711	chr11:12150711:C:T	rs7943183	C	T	C	Sox2_MA0143.3	23	0	-	0	0	.
chr11	12150722	12150723	chr11:12150723:T:C	rs9804669	T	C	C	Sox2_MA0143.3	11	0	-	0	0	.
chr11	12184245	12184246	chr11:12184246:T:C	rs901291	T	C	C	Sox2_MA0143.3	4	1	+	9.206767037375712	2.2980122580604916	CCTTTGTC
chr11	12220834	12220835	chr11:12220835:G:A	rs3923360	G	A	A	Sox2_MA0143.3	24	0	+	0	0	.
chr11	12242117	12242118	chr11:12242118:A:G	rs2403615	A	G	G	Sox2_MA0143.3	-2	0	+	0	0	.
chr11	12269749	12269750	chr11:12269750:C:A	rs35712981	C	A	C	Sox2_MA0143.3	5	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr11	12273061	12273062	chr11:12273062:C:A	rs11607178	C	A	C	Sox2_MA0143.3	23	0	-	0	0	.
chr11	12288754	12288755	chr11:12288755:C:T	rs186079763	C	T	c	Sox2_MA0143.3	-18	0	-	0	0	.
chr11	12376944	12376945	chr11:12376945:T:C	rs138391120	T	C	T	Sox2_MA0143.3	6	1	+	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr11	12452550	12452551	chr11:12452551:A:G	rs4756884	A	G	A	Sox2_MA0143.3	8	0	+	0	0	.
chr11	12583585	12583586	chr11:12583586:T:C	rs10831861	T	C	T	Sox2_MA0143.3	11	0	-	0	0	.
chr11	12692677	12692678	chr11:12692678:G:A	rs888681643	G	A	G	Sox2_MA0143.3	20	0	-	0	0	.
chr11	12693978	12693979	chr11:12693979:G:C	rs149284880	G	C	G	Sox2_MA0143.3	8	0	-	0	0	.
chr11	12724809	12724810	chr11:12724810:C:T	chr11:12724810:C:T	C	T	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr11	12773420	12773421	chr11:12773421:C:T	rs111514807	C	T	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr11	12846188	12846189	chr11:12846189:C:T	rs745601666	C	T	C	Sox2_MA0143.3	18	0	+	0	0	.
chr11	12849579	12849580	chr11:12849580:C:T	rs6486066	C	T	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr11	12898337	12898338	chr11:12898338:G:C	rs10500765	G	C	C	Sox2_MA0143.3	27	0	-	0	0	.
chr11	12898361	12898362	chr11:12898362:A:G	rs10500766	A	G	A	Sox2_MA0143.3	3	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr11	12961627	12961628	chr11:12961628:T:C	rs4415741	T	C	T	Sox2_MA0143.3	22	0	+	0	0	.
chr11	13039465	13039466	chr11:13039466:C:T	rs138654835	C	T	T	Sox2_MA0143.3	-10	0	-	0	0	.
chr11	13046691	13046692	chr11:13046692:G:T	rs10766026	G	T	G	Sox2_MA0143.3	-2	0	+	0	0	.
chr11	13073991	13073992	chr11:13073992:G:T	rs10831952	G	T	g	Sox2_MA0143.3	20	0	-	0	0	.
chr11	13076503	13076504	chr11:13076504:A:G	rs10831953	A	G	a	Sox2_MA0143.3	22	0	-	0	0	.
chr11	13077115	13077116	chr11:13077116:T:C	rs184369701	T	C	t	Sox2_MA0143.3	2	1	-	9.019595766176417	2.900948058900136	CCATTGTC
chr11	13098208	13098209	chr11:13098209:T:A	rs1441343	T	A	T	Sox2_MA0143.3	9	0	+	0	0	.
chr11	13111074	13111075	chr11:13111075:A:G	rs12797847	A	G	A	Sox2_MA0143.3	2	1	+	9.019595766176417	2.900948058900136	CCATTGTC
chr11	13111076	13111077	chr11:13111077:T:C	rs58993465	T	C	T	Sox2_MA0143.3	4	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr11	13120903	13120904	chr11:13120904:A:T	rs61878005	A	T	A	Sox2_MA0143.3	2	1	+	9.613475778572903	9.800647049772198	CCATTGTT
chr11	13120927	13120928	chr11:13120928:A:C	rs117780221	A	C	A	Sox2_MA0143.3	26	0	+	0	0	.
chr11	13126742	13126743	chr11:13126743:A:G	rs10831976	A	G	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr11	13140045	13140046	chr11:13140046:C:T	rs61878027	C	T	C	Sox2_MA0143.3	18	0	+	0	0	.
chr11	13250623	13250624	chr11:13250624:A:G	rs1481876	A	G	G	Sox2_MA0143.3	-11	0	+	0	0	.
chr11	13285100	13285101	chr11:13285101:A:G	rs4146387	A	G	G	Sox2_MA0143.3	-11	0	+	0	0	.
chr11	13316084	13316085	chr11:13316085:G:C	rs72869111	G	C	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr11	13369312	13369313	chr11:13369313:T:G	rs11022778	T	G	T	Sox2_MA0143.3	-9	0	+	0	0	.
chr11	13668207	13668208	chr11:13668208:C:T	rs1396283068	C	T	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr11	13781082	13781083	chr11:13781083:G:A	rs310043	G	A	A	Sox2_MA0143.3	-14	0	-	0	0	.
chr11	13874884	13874885	chr11:13874885:A:G	rs1857987	A	G	A	Sox2_MA0143.3	8	0	-	0	0	.
chr11	13889747	13889748	chr11:13889748:C:A	rs4757205	C	A	C	Sox2_MA0143.3	14	0	-	0	0	.
chr11	13929116	13929117	chr11:13929117:C:T	rs17553109	C	T	C	Sox2_MA0143.3	24	0	-	0	0	.
chr11	13940846	13940847	chr11:13940847:C:T	rs534262010	C	T	C	Sox2_MA0143.3	12	0	-	0	0	.
chr11	13955174	13955175	chr11:13955175:C:A	rs2248007	C	A	A	Sox2_MA0143.3	15	0	-	0	0	.
chr11	13961751	13961752	chr11:13961752:G:A	rs7940363	G	A	G	Sox2_MA0143.3	0	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr11	13983785	13983786	chr11:13983786:C:T	rs114995016	C	T	C	Sox2_MA0143.3	16	0	+	0	0	.
chr11	14026932	14026933	chr11:14026933:C:T	rs10832164	C	T	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr11	14042844	14042845	chr11:14042845:A:G	rs11023059	A	G	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr11	14113334	14113335	chr11:14113335:G:T	rs79493505	G	T	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr11	14136933	14136934	chr11:14136934:G:A	rs9919595	G	A	G	Sox2_MA0143.3	5	1	+	9.613475778572903	2.7047209992576837	CCATTGTT
chr11	14176471	14176472	chr11:14176472:A:G	rs11602192	A	G	G	Sox2_MA0143.3	27	0	-	0	0	.
chr11	14220923	14220924	chr11:14220924:T:C	rs7932425	T	C	C	Sox2_MA0143.3	24	0	-	0	0	.
chr11	14578155	14578156	chr11:14578156:T:C	rs149372895	T	C	T	Sox2_MA0143.3	-13	0	+	0	0	.
chr11	15158442	15158443	chr11:15158443:A:G	rs12269858	A	G	A	Sox2_MA0143.3	-17	0	+	0	0	.
chr11	15158537	15158538	chr11:15158538:A:C	rs80305551	A	C	A	Sox2_MA0143.3	25	0	+	0	0	.
chr11	15225339	15225340	chr11:15225340:A:G	rs1714337	A	G	G	Sox2_MA0143.3	2	1	-	9.800647049772198	3.494828071296623	CCTTTGTT
chr11	15256813	15256814	chr11:15256814:A:G	rs114884415	A	G	A	Sox2_MA0143.3	18	0	-	0	0	.
chr11	15256816	15256817	chr11:15256817:C:G	rs10832383	C	G	G	Sox2_MA0143.3	15	0	-	0	0	.
chr11	15275337	15275338	chr11:15275338:A:G	rs143746074	A	G	A	Sox2_MA0143.3	-4	0	+	0	0	.
chr11	15328084	15328085	chr11:15328085:G:A	rs115442764	G	A	G	Sox2_MA0143.3	22	0	+	0	0	.
chr11	15374521	15374522	chr11:15374522:T:A	rs75182940	T	A	T	Sox2_MA0143.3	4	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr11	15484804	15484805	chr11:15484805:G:T	rs7950188	G	T	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr11	15501614	15501615	chr11:15501615:C:T	rs72868214	C	T	C	Sox2_MA0143.3	11	0	+	0	0	.
chr11	15552409	15552410	chr11:15552410:T:G	rs10741679	T	G	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr11	15570774	15570775	chr11:15570775:T:C	rs11023639	T	C	C	Sox2_MA0143.3	13	0	-	0	0	.
chr11	15636934	15636935	chr11:15636935:G:A	rs7481140	G	A	G	Sox2_MA0143.3	-3	0	-	0	0	.
chr11	15637171	15637172	chr11:15637172:T:C	rs10832493	T	C	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr11	15703321	15703322	chr11:15703322:T:C	rs12365254	T	C	T	Sox2_MA0143.3	2	1	-	9.613475778572903	3.494828071296623	CCATTGTT
chr11	15731846	15731847	chr11:15731847:A:G	rs974086	A	G	G	Sox2_MA0143.3	11	0	+	0	0	.
chr11	15769277	15769278	chr11:15769278:A:T	rs16931985	A	T	A	Sox2_MA0143.3	-2	0	-	0	0	.
chr11	15816672	15816673	chr11:15816673:G:T	rs181048267	G	T	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr11	15927315	15927316	chr11:15927316:C:G	rs6486269	C	G	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr11	15970772	15970773	chr11:15970773:A:C	rs11023803	A	C	.	Sox2_MA0143.3	-4	0	-	0	0	.
chr11	16118471	16118472	chr11:16118472:C:T	rs145102612	C	T	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr11	16722881	16722882	chr11:16722882:C:T	rs11024025	C	T	T	Sox2_MA0143.3	-15	0	+	0	0	.
chr11	16739176	16739177	chr11:16739177:T:G	rs11826990	T	G	G	Sox2_MA0143.3	13	0	+	0	0	.
chr11	16771553	16771554	chr11:16771554:C:T	rs35031492	C	T	C	Sox2_MA0143.3	27	0	+	0	0	.
chr11	16783050	16783051	chr11:16783051:C:G	rs74406763	C	G	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr11	16804653	16804654	chr11:16804654:C:T	rs117360265	C	T	C	Sox2_MA0143.3	26	0	+	0	0	.
chr11	16876047	16876048	chr11:16876048:C:A	rs12795133	C	A	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr11	16891319	16891320	chr11:16891320:T:G	rs402838	T	G	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr11	16891323	16891324	chr11:16891324:G:C	rs117633391	G	C	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr11	17014609	17014610	chr11:17014610:A:G	rs35115039	A	G	G	Sox2_MA0143.3	-11	0	+	0	0	.
chr11	17014632	17014633	chr11:17014633:A:C	rs34986803	A	C	C	Sox2_MA0143.3	12	0	+	0	0	.
chr11	17159792	17159793	chr11:17159793:C:T	rs214906	C	T	C	Sox2_MA0143.3	16	0	-	0	0	.
chr11	17219297	17219298	chr11:17219298:G:T	rs61879758	G	T	G	Sox2_MA0143.3	19	0	-	0	0	.
chr11	17314863	17314864	chr11:17314864:C:T	rs11024251	C	T	C	Sox2_MA0143.3	18	0	+	0	0	.
chr11	17440756	17440757	chr11:17440757:A:C	rs2283261	A	C	C	Sox2_MA0143.3	3	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr11	17479283	17479284	chr11:17479284:G:A	rs80306361	G	A	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr11	17480056	17480057	chr11:17480057:G:A	rs73433183	G	A	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr11	17510554	17510555	chr11:17510555:C:T	rs2237964	C	T	C	Sox2_MA0143.3	5	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr11	17533564	17533565	chr11:17533565:T:C	rs2883581	T	C	C	Sox2_MA0143.3	4	1	+	9.206767037375712	2.2980122580604916	CCTTTGTC
chr11	17551587	17551588	chr11:17551588:C:T	rs554231950	C	T	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr11	17551781	17551782	chr11:17551782:G:A	rs10766410	G	A	A	Sox2_MA0143.3	-10	0	+	0	0	.
chr11	17599670	17599671	chr11:17599671:C:T	rs117005078	C	T	C	Sox2_MA0143.3	27	0	-	0	0	.
chr11	17601936	17601937	chr11:17601937:C:T	rs73418086	C	T	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr11	17648745	17648746	chr11:17648746:A:C	rs7107666	A	C	C	Sox2_MA0143.3	14	0	+	0	0	.
chr11	17697022	17697023	chr11:17697023:A:G	rs10766420	A	G	A	Sox2_MA0143.3	23	0	-	0	0	.
chr11	17765762	17765763	chr11:17765763:G:A	rs73424016	G	A	G	Sox2_MA0143.3	-9	0	+	0	0	.
chr11	17765793	17765794	chr11:17765794:G:A	rs138576931	G	A	A	Sox2_MA0143.3	22	0	+	0	0	.
chr11	17770274	17770275	chr11:17770275:T:G	rs7946133	T	G	T	Sox2_MA0143.3	-10	0	-	0	0	.
chr11	17800810	17800811	chr11:17800811:G:A	rs776718298	G	A	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr11	17986828	17986829	chr11:17986829:T:C	rs623143	T	C	T	Sox2_MA0143.3	2	1	+	3.5547341015215945	-2.751084876953981	CCTTTGTA
chr11	18105723	18105724	chr11:18105724:G:T	rs76327995	G	T	G	Sox2_MA0143.3	25	0	+	0	0	.
chr11	18708049	18708050	chr11:18708050:A:G	rs7110914	A	G	A	Sox2_MA0143.3	-10	0	+	0	0	.
chr11	18792230	18792231	chr11:18792231:G:A	rs1012671719	G	A	G	Sox2_MA0143.3	7	1	-	9.206767037375712	9.800647049772198	CCTTTGTC
chr11	18803122	18803123	chr11:18803123:C:G	rs4601750	C	G	C	Sox2_MA0143.3	15	0	-	0	0	.
chr11	18820044	18820045	chr11:18820045:C:T	rs7930561	C	T	T	Sox2_MA0143.3	-2	0	+	0	0	.
chr11	18863912	18863913	chr11:18863913:G:A	rs12787111	G	A	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr11	18866133	18866134	chr11:18866134:T:C	rs1483095	T	C	.	Sox2_MA0143.3	6	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr11	18866203	18866204	chr11:18866204:G:C	rs12225720	G	C	.	Sox2_MA0143.3	8	0	-	0	0	.
chr11	18867893	18867894	chr11:18867894:A:G	rs1384642	A	G	.	Sox2_MA0143.3	8	0	+	0	0	.
chr11	19198360	19198361	chr11:19198361:A:G	rs35236689	A	G	A	Sox2_MA0143.3	-2	0	+	0	0	.
chr11	19454069	19454070	chr11:19454070:C:T	rs999884	C	T	C	Sox2_MA0143.3	-5	0	-	0	0	.
chr11	19481836	19481837	chr11:19481837:T:C	rs12222168	T	C	T	Sox2_MA0143.3	13	0	-	0	0	.
chr11	19526525	19526526	chr11:19526526:A:G	rs7127676	A	G	a	Sox2_MA0143.3	2	1	+	9.613475778572903	3.494828071296623	CCATTGTT
chr11	19552039	19552040	chr11:19552040:C:A	rs11025180	C	A	C	Sox2_MA0143.3	26	0	+	0	0	.
chr11	19597693	19597694	chr11:19597694:G:A	rs7930097	G	A	G	Sox2_MA0143.3	-2	0	+	0	0	.
chr11	19644399	19644400	chr11:19644400:C:T	rs1559662	C	T	C	Sox2_MA0143.3	1	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr11	19706253	19706254	chr11:19706254:C:T	rs10732470	C	T	C	Sox2_MA0143.3	0	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr11	19721703	19721704	chr11:19721704:T:G	rs7118901	T	G	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr11	19730437	19730438	chr11:19730438:T:C	rs78897008	T	C	T	Sox2_MA0143.3	27	0	-	0	0	.
chr11	19754956	19754957	chr11:19754957:A:G	rs10833164	A	G	A	Sox2_MA0143.3	-9	0	+	0	0	.
chr11	19777896	19777897	chr11:19777897:C:T	rs535978213	C	T	C	Sox2_MA0143.3	0	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr11	19839402	19839403	chr11:19839403:C:T	rs7925366	C	T	c	Sox2_MA0143.3	-5	0	-	0	0	.
chr11	19861819	19861820	chr11:19861820:G:A	rs11025298	G	A	G	Sox2_MA0143.3	24	0	-	0	0	.
chr11	19861851	19861852	chr11:19861852:G:C	rs12798177	G	C	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr11	19864816	19864817	chr11:19864817:G:A	rs2014079	G	A	G	Sox2_MA0143.3	-16	0	-	0	0	.
chr11	19872730	19872731	chr11:19872731:G:A	rs2585752	G	A	A	Sox2_MA0143.3	-16	0	+	0	0	.
chr11	20000980	20000981	chr11:20000981:C:A	rs11602997	C	A	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr11	20033341	20033342	chr11:20033342:G:A	rs10833224	G	A	A	Sox2_MA0143.3	-3	0	+	0	0	.
chr11	20065217	20065218	chr11:20065218:T:G	rs1978947	T	G	T	Sox2_MA0143.3	13	0	+	0	0	.
chr11	20070849	20070850	chr11:20070850:T:C	rs11025369	T	C	C	Sox2_MA0143.3	-12	0	-	0	0	.
chr11	20083122	20083123	chr11:20083123:G:A	rs2028570	G	A	A	Sox2_MA0143.3	8	0	-	0	0	.
chr11	20102144	20102145	chr11:20102145:T:C	rs10833243	T	C	T	Sox2_MA0143.3	27	0	+	0	0	.
chr11	20136550	20136551	chr11:20136551:C:T	rs71488732	C	T	C	Sox2_MA0143.3	8	0	+	0	0	.
chr11	20310888	20310889	chr11:20310889:G:A	rs2132964	G	A	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr11	20352078	20352079	chr11:20352079:G:C	rs10741830	G	C	G	Sox2_MA0143.3	-14	0	+	0	0	.
chr11	20438177	20438178	chr11:20438178:A:G	rs112838575	A	G	A	Sox2_MA0143.3	-15	0	-	0	0	.
chr11	20474774	20474775	chr11:20474775:A:G	rs10833332	A	G	A	Sox2_MA0143.3	27	0	-	0	0	.
chr11	20474809	20474810	chr11:20474810:A:T	rs143141420	A	T	A	Sox2_MA0143.3	14	0	-	0	0	.
chr11	20563901	20563902	chr11:20563902:A:T	rs72942359	A	T	A	Sox2_MA0143.3	-5	0	+	0	0	.
chr11	20590027	20590028	chr11:20590028:A:G	rs75190077	A	G	A	Sox2_MA0143.3	-17	0	-	0	0	.
chr11	20631595	20631596	chr11:20631596:A:G	rs180717664	A	G	A	Sox2_MA0143.3	-7	0	-	0	0	.
chr11	20653889	20653890	chr11:20653890:A:T	rs17298474	A	T	A	Sox2_MA0143.3	22	0	-	0	0	.
chr11	20672220	20672221	chr11:20672221:T:C	rs79130134	T	C	T	Sox2_MA0143.3	25	0	-	0	0	.
chr11	20862739	20862740	chr11:20862740:A:G	chr11:20862740:A:G	A	G	-	Sox2_MA0143.3	-19	0	-	0	0	.
chr11	21117037	21117038	chr11:21117038:T:C	rs7130597	T	C	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr11	21421536	21421537	chr11:21421537:T:G	rs1945428	T	G	T	Sox2_MA0143.3	13	0	-	0	0	.
chr11	21541239	21541240	chr11:21541240:T:C	rs4923644	T	C	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr11	21541245	21541246	chr11:21541246:G:A	rs4923645	G	A	G	Sox2_MA0143.3	5	1	+	9.613475778572903	2.7047209992576837	CCATTGTT
chr11	21616916	21616917	chr11:21616917:A:G	rs2032373	A	G	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr11	21635465	21635466	chr11:21635466:C:T	rs4275629	C	T	C	Sox2_MA0143.3	15	0	-	0	0	.
chr11	21729971	21729972	chr11:21729972:G:C	rs12419148	G	C	C	Sox2_MA0143.3	10	0	-	0	0	.
chr11	21752994	21752995	chr11:21752995:C:A	rs187102967	C	A	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr11	21814492	21814493	chr11:21814493:C:T	rs986020692	C	T	C	Sox2_MA0143.3	18	0	-	0	0	.
chr11	21814495	21814496	chr11:21814496:T:C	rs72965369	T	C	T	Sox2_MA0143.3	15	0	-	0	0	.
chr11	21908491	21908492	chr11:21908492:T:C	rs409140	T	C	T	Sox2_MA0143.3	-14	0	+	0	0	.
chr11	21924760	21924761	chr11:21924761:A:G	rs61880355	A	G	A	Sox2_MA0143.3	21	0	+	0	0	.
chr11	21965467	21965468	chr11:21965468:T:G	rs324227	T	G	T	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr11	21965490	21965491	chr11:21965491:G:A	rs4550219	G	A	A	Sox2_MA0143.3	26	0	+	0	0	.
chr11	21969440	21969441	chr11:21969441:G:A	rs11605534	G	A	A	Sox2_MA0143.3	12	0	-	0	0	.
chr11	22079612	22079613	chr11:22079613:T:C	rs4922610	T	C	C	Sox2_MA0143.3	2	1	-	9.019595766176417	2.900948058900136	CCATTGTC
chr11	22130632	22130633	chr11:22130633:A:G	rs80329186	A	G	A	Sox2_MA0143.3	2	1	+	9.019595766176417	2.900948058900136	CCATTGTC
chr11	22340749	22340750	chr11:22340750:C:T	rs1447514	C	T	C	Sox2_MA0143.3	13	0	+	0	0	.
chr11	22431236	22431237	chr11:22431237:C:T	rs76165488	C	T	C	Sox2_MA0143.3	9	0	-	0	0	.
chr11	22625177	22625178	chr11:22625178:C:A	rs146975768	C	A	c	Sox2_MA0143.3	-4	0	-	0	0	.
chr11	22625186	22625187	chr11:22625187:C:A	rs7103674	C	A	c	Sox2_MA0143.3	-13	0	-	0	0	.
chr11	22690430	22690431	chr11:22690431:C:T	rs337475	C	T	T	Sox2_MA0143.3	-6	0	+	0	0	.
chr11	22763136	22763137	chr11:22763137:C:T	rs4362143	C	T	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr11	22832490	22832491	chr11:22832491:G:A	rs149113726	G	A	G	Sox2_MA0143.3	12	0	+	0	0	.
chr11	23020564	23020565	chr11:23020565:G:A	rs76786674	G	A	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr11	23103739	23103740	chr11:23103740:C:T	rs7112320	C	T	T	Sox2_MA0143.3	-19	0	-	0	0	.
chr11	23227169	23227170	chr11:23227170:A:G	rs4922646	A	G	A	Sox2_MA0143.3	22	0	+	0	0	.
chr11	23265018	23265019	chr11:23265019:A:T	rs10767032	A	T	A	Sox2_MA0143.3	22	0	-	0	0	.
chr11	23265054	23265055	chr11:23265055:C:G	rs34346136	C	G	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr11	23367063	23367064	chr11:23367064:A:G	rs61889913	A	G	A	Sox2_MA0143.3	3	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr11	23481006	23481007	chr11:23481007:T:A	rs16911344	T	A	T	Sox2_MA0143.3	3	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr11	23483857	23483858	chr11:23483858:G:A	rs7948893	G	A	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr11	23973339	23973340	chr11:23973340:G:T	rs7938829	G	T	T	Sox2_MA0143.3	-11	0	-	0	0	.
chr11	23979960	23979961	chr11:23979961:A:G	rs117478283	A	G	A	Sox2_MA0143.3	12	0	+	0	0	.
chr11	24044078	24044079	chr11:24044079:G:T	rs72881122	G	T	T	Sox2_MA0143.3	13	0	+	0	0	.
chr11	24069888	24069889	chr11:24069889:C:T	rs4922673	C	T	C	Sox2_MA0143.3	12	0	+	0	0	.
chr11	24069901	24069902	chr11:24069902:G:A	rs2957785	G	A	G	Sox2_MA0143.3	25	0	+	0	0	.
chr11	24156081	24156082	chr11:24156082:G:A	rs12793729	G	A	G	Sox2_MA0143.3	16	0	-	0	0	.
chr11	24377286	24377287	chr11:24377287:G:A	rs1159408	G	A	G	Sox2_MA0143.3	26	0	-	0	0	.
chr11	24588472	24588473	chr11:24588473:C:T	rs1858156	C	T	T	Sox2_MA0143.3	5	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr11	24782266	24782267	chr11:24782267:G:C	rs2631395	G	C	G	Sox2_MA0143.3	14	0	+	0	0	.
chr11	24783915	24783916	chr11:24783916:C:T	rs1471862	C	T	T	Sox2_MA0143.3	15	0	+	0	0	.
chr11	24901281	24901282	chr11:24901282:A:G	rs77011879	A	G	A	Sox2_MA0143.3	6	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr11	25073429	25073430	chr11:25073430:C:T	rs1809016	C	T	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr11	25151482	25151483	chr11:25151483:T:C	rs11028469	T	C	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr11	25212119	25212120	chr11:25212120:C:T	rs577837364	C	T	C	Sox2_MA0143.3	7	1	-	8.864090315184848	3.5547341015215945	CCTTTGTG
chr11	25294070	25294071	chr11:25294071:A:G	rs10834641	A	G	G	Sox2_MA0143.3	-2	0	+	0	0	.
chr11	25297061	25297062	chr11:25297062:T:C	rs12806211	T	C	T	Sox2_MA0143.3	-14	0	+	0	0	.
chr11	25414969	25414970	chr11:25414970:G:T	rs12795552	G	T	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr11	25675036	25675037	chr11:25675037:T:C	rs67069380	T	C	T	Sox2_MA0143.3	15	0	-	0	0	.
chr11	25779500	25779501	chr11:25779501:G:A	rs10834801	G	A	A	Sox2_MA0143.3	16	0	+	0	0	.
chr11	25795126	25795127	chr11:25795127:C:T	rs931524	C	T	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr11	25879388	25879389	chr11:25879389:G:A	rs10834835	G	A	G	Sox2_MA0143.3	24	0	+	0	0	.
chr11	25993671	25993672	chr11:25993672:T:C	rs11029066	T	C	C	Sox2_MA0143.3	15	0	+	0	0	.
chr11	26001742	26001743	chr11:26001743:A:T	rs1826054	A	T	a	Sox2_MA0143.3	6	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr11	26062956	26062957	chr11:26062957:T:C	rs10834904	T	C	T	Sox2_MA0143.3	-19	0	-	0	0	.
chr11	26073984	26073985	chr11:26073985:G:C	rs79994318	G	C	G	Sox2_MA0143.3	24	0	-	0	0	.
chr11	26177965	26177966	chr11:26177966:T:G	rs76571325	T	G	T	Sox2_MA0143.3	-19	0	-	0	0	.
chr11	26297692	26297693	chr11:26297693:G:T	rs117803679	G	T	G	Sox2_MA0143.3	16	0	-	0	0	.
chr11	26325138	26325139	chr11:26325139:A:G	rs10834962	A	G	A	Sox2_MA0143.3	10	0	+	0	0	.
chr11	26329183	26329184	chr11:26329184:T:C	rs7121193	T	C	T	Sox2_MA0143.3	-10	0	-	0	0	.
chr11	26533824	26533825	chr11:26533825:C:T	rs293941	C	T	T	Sox2_MA0143.3	-1	0	-	0	0	.
chr11	26533841	26533842	chr11:26533842:A:G	rs118102367	A	G	A	Sox2_MA0143.3	-18	0	-	0	0	.
chr11	26607954	26607955	chr11:26607955:T:C	rs61878595	T	C	T	Sox2_MA0143.3	4	1	+	9.206767037375712	2.2980122580604916	CCTTTGTC
chr11	26622881	26622882	chr11:26622882:A:G	rs1565760	A	G	A	Sox2_MA0143.3	12	0	-	0	0	.
chr11	26741087	26741088	chr11:26741088:T:A	rs10501064	T	A	T	Sox2_MA0143.3	15	0	-	0	0	.
chr11	26741193	26741194	chr11:26741194:A:T	rs113488357	A	T	a	Sox2_MA0143.3	3	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr11	26768830	26768831	chr11:26768831:A:C	rs10835071	A	C	C	Sox2_MA0143.3	13	0	-	0	0	.
chr11	26976370	26976371	chr11:26976371:T:C	rs10835087	T	C	T	Sox2_MA0143.3	22	0	+	0	0	.
chr11	26984139	26984140	chr11:26984140:T:A	rs11029765	T	A	A	Sox2_MA0143.3	-17	0	+	0	0	.
chr11	27205043	27205044	chr11:27205044:G:T	rs10835128	G	T	G	Sox2_MA0143.3	10	0	+	0	0	.
chr11	27208140	27208141	chr11:27208141:C:A	rs4101118	C	A	C	Sox2_MA0143.3	8	0	-	0	0	.
chr11	27352982	27352983	chr11:27352983:T:C	rs764498690	T	C	T	Sox2_MA0143.3	-10	0	-	0	0	.
chr11	27645983	27645984	chr11:27645984:C:T	rs1519479	C	T	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr11	27710435	27710436	chr11:27710436:G:A	rs7934165	G	A	G	Sox2_MA0143.3	20	0	-	0	0	.
chr11	27726945	27726946	chr11:27726946:C:A	rs17309930	C	A	A	Sox2_MA0143.3	5	1	-	8.676919043985553	1.7681642646703324	CCATTGTG
chr11	27964464	27964465	chr11:27964465:A:G	rs78094834	A	G	A	Sox2_MA0143.3	15	0	+	0	0	.
chr11	27995255	27995256	chr11:27995256:C:T	rs11030180	C	T	T	Sox2_MA0143.3	-18	0	-	0	0	.
chr11	28245152	28245153	chr11:28245153:A:G	rs10835294	A	G	A	Sox2_MA0143.3	3	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr11	28296160	28296161	chr11:28296161:G:T	rs12280551	G	T	G	Sox2_MA0143.3	14	0	+	0	0	.
chr11	28517846	28517847	chr11:28517847:G:A	rs35347860	G	A	G	Sox2_MA0143.3	11	0	-	0	0	.
chr11	28585151	28585152	chr11:28585152:T:C	rs10835360	T	C	C	Sox2_MA0143.3	27	0	+	0	0	.
chr11	28735358	28735359	chr11:28735359:T:C	rs55991240	T	C	T	Sox2_MA0143.3	19	0	+	0	0	.
chr11	28767227	28767228	chr11:28767228:A:G	rs147143347	A	G	A	Sox2_MA0143.3	20	0	-	0	0	.
chr11	28787866	28787867	chr11:28787867:C:A	rs566604997	C	A	C	Sox2_MA0143.3	1	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr11	28842751	28842752	chr11:28842752:T:C	rs1589104	T	C	T	Sox2_MA0143.3	22	0	+	0	0	.
chr11	28885111	28885112	chr11:28885112:G:A	rs6484413	G	A	G	Sox2_MA0143.3	17	0	+	0	0	.
chr11	28970037	28970038	chr11:28970038:A:C	rs34802941	A	C	A	Sox2_MA0143.3	-8	0	+	0	0	.
chr11	28970061	28970062	chr11:28970062:A:G	rs35913250	A	G	A	Sox2_MA0143.3	16	0	+	0	0	.
chr11	29024995	29024996	chr11:29024996:A:G	rs17662858	A	G	A	Sox2_MA0143.3	2	1	+	9.613475778572903	3.494828071296623	CCATTGTT
chr11	29064248	29064249	chr11:29064249:A:T	rs1491800	A	T	T	Sox2_MA0143.3	-2	0	+	0	0	.
chr11	29318574	29318575	chr11:29318575:A:G	rs35556018	A	G	A	Sox2_MA0143.3	-7	0	-	0	0	.
chr11	29518948	29518949	chr11:29518949:T:C	rs369556229	T	C	T	Sox2_MA0143.3	26	0	+	0	0	.
chr11	29568709	29568710	chr11:29568710:G:A	rs61888516	G	A	G	Sox2_MA0143.3	18	0	-	0	0	.
chr11	29584718	29584719	chr11:29584719:T:C	rs326765	T	C	C	Sox2_MA0143.3	10	0	+	0	0	.
chr11	29876433	29876434	chr11:29876434:C:T	rs4922829	C	T	C	Sox2_MA0143.3	22	0	+	0	0	.
chr11	29981145	29981146	chr11:29981146:A:G	rs148891720	A	G	A	Sox2_MA0143.3	-18	0	-	0	0	.
chr11	30151368	30151369	chr11:30151369:A:C	rs1890826	A	C	C	Sox2_MA0143.3	8	0	-	0	0	.
chr11	30203622	30203623	chr11:30203623:G:C	rs1716021	G	C	C	Sox2_MA0143.3	12	0	-	0	0	.
chr11	30259782	30259783	chr11:30259783:G:A	rs6484477	G	A	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr11	30310846	30310847	chr11:30310847:C:T	rs7130017	C	T	C	Sox2_MA0143.3	9	0	+	0	0	.
chr11	30322749	30322750	chr11:30322750:G:T	rs746202605	G	T	G	Sox2_MA0143.3	0	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr11	30380557	30380558	chr11:30380558:T:C	rs487336	T	C	C	Sox2_MA0143.3	15	0	-	0	0	.
chr11	30422613	30422614	chr11:30422614:C:T	rs34041902	C	T	C	Sox2_MA0143.3	5	1	-	8.676919043985553	1.7681642646703324	CCATTGTG
chr11	30521369	30521370	chr11:30521370:C:A	rs77715340	C	A	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr11	30540970	30540971	chr11:30540971:C:T	rs115876500	C	T	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr11	30544824	30544825	chr11:30544825:C:T	rs3781849	C	T	C	Sox2_MA0143.3	24	0	-	0	0	.
chr11	30749958	30749959	chr11:30749959:T:A	rs377154303	T	A	T	Sox2_MA0143.3	-6	0	+	0	0	.
chr11	30749970	30749971	chr11:30749971:T:C	rs370560371	T	C	T	Sox2_MA0143.3	6	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr11	30919636	30919637	chr11:30919637:A:C	rs17331559	A	C	A	Sox2_MA0143.3	-16	0	+	0	0	.
chr11	30984605	30984606	chr11:30984606:T:C	rs116019184	T	C	T	Sox2_MA0143.3	15	0	-	0	0	.
chr11	31005373	31005374	chr11:31005374:C:G	rs985717925	C	G	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr11	31132526	31132527	chr11:31132527:T:A	rs1559778	T	A	t	Sox2_MA0143.3	14	0	-	0	0	.
chr11	31668444	31668445	chr11:31668445:A:G	rs10835800	A	G	A	Sox2_MA0143.3	11	0	-	0	0	.
chr11	31801453	31801454	chr11:31801454:G:C	rs112714525	G	C	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr11	31807695	31807696	chr11:31807696:C:T	rs555977937	C	T	C	Sox2_MA0143.3	12	0	-	0	0	.
chr11	31807789	31807790	chr11:31807790:C:T	rs577716396	C	T	C	Sox2_MA0143.3	24	0	-	0	0	.
chr11	31876336	31876337	chr11:31876337:C:T	rs140066452	C	T	C	Sox2_MA0143.3	14	0	+	0	0	.
chr11	32041473	32041474	chr11:32041474:A:G	rs193052496	A	G	A	Sox2_MA0143.3	-20	0	+	0	0	.
chr11	32041846	32041847	chr11:32041847:C:T	rs11602684	C	T	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr11	32185010	32185011	chr11:32185011:C:G	rs61878835	C	G	c	Sox2_MA0143.3	-15	0	-	0	0	.
chr11	32308068	32308069	chr11:32308069:A:G	rs57402804	A	G	A	Sox2_MA0143.3	8	0	-	0	0	.
chr11	32563166	32563167	chr11:32563167:A:G	rs11607788	A	G	A	Sox2_MA0143.3	-20	0	+	0	0	.
chr11	32588920	32588921	chr11:32588921:G:C	rs11031885	G	C	G	Sox2_MA0143.3	25	0	+	0	0	.
chr11	32862361	32862362	chr11:32862362:T:G	rs11032032	T	G	T	Sox2_MA0143.3	2	1	-	9.019595766176417	2.900948058900136	CCATTGTC
chr11	33056107	33056108	chr11:33056108:G:A	rs11032130	G	A	G	Sox2_MA0143.3	-5	0	+	0	0	.
chr11	33177888	33177889	chr11:33177889:C:G	rs11605077	C	G	G	Sox2_MA0143.3	27	0	-	0	0	.
chr11	33310909	33310910	chr11:33310910:C:G	rs79950843	C	G	C	Sox2_MA0143.3	1	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr11	33690885	33690886	chr11:33690886:C:G	rs76654734	C	G	C	Sox2_MA0143.3	0	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr11	33701276	33701277	chr11:33701277:C:T	rs831616	C	T	C	Sox2_MA0143.3	9	0	-	0	0	.
chr11	33829084	33829085	chr11:33829085:G:A	rs193103934	G	A	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr11	33842751	33842752	chr11:33842752:T:C	rs7925364	T	C	T	Sox2_MA0143.3	2	1	-	9.019595766176417	2.900948058900136	CCATTGTC
chr11	33927408	33927409	chr11:33927409:G:A	rs140377368	G	A	g	Sox2_MA0143.3	27	0	+	0	0	.
chr11	33976933	33976934	chr11:33976934:T:C	rs76061348	T	C	T	Sox2_MA0143.3	-12	0	+	0	0	.
chr11	34049731	34049732	chr11:34049732:A:G	rs12419629	A	G	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr11	34186652	34186653	chr11:34186653:T:C	rs967457	T	C	T	Sox2_MA0143.3	-10	0	-	0	0	.
chr11	34194058	34194059	chr11:34194059:T:C	rs2473904	T	C	T	Sox2_MA0143.3	-7	0	+	0	0	.
chr11	34195187	34195188	chr11:34195188:C:T	rs12278589	C	T	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr11	34263324	34263325	chr11:34263325:G:C	rs117907997	G	C	G	Sox2_MA0143.3	0	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr11	34316794	34316795	chr11:34316795:T:C	rs4755368	T	C	T	Sox2_MA0143.3	25	0	-	0	0	.
chr11	34351073	34351074	chr11:34351074:A:G	rs10836192	A	G	A	Sox2_MA0143.3	4	1	-	9.206767037375712	2.2980122580604916	CCTTTGTC
chr11	34359497	34359498	chr11:34359498:G:A	rs113129344	G	A	G	Sox2_MA0143.3	25	0	-	0	0	.
chr11	34359527	34359528	chr11:34359528:T:C	rs1925369	T	C	C	Sox2_MA0143.3	-5	0	-	0	0	.
chr11	34396322	34396323	chr11:34396323:T:C	rs1157669	T	C	C	Sox2_MA0143.3	3	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr11	34501065	34501066	chr11:34501066:G:A	rs7109462	G	A	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr11	34547032	34547033	chr11:34547033:A:G	rs836117	A	G	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr11	34564249	34564250	chr11:34564250:C:T	rs76838192	C	T	C	Sox2_MA0143.3	15	0	+	0	0	.
chr11	34566488	34566489	chr11:34566489:A:T	rs10732488	A	T	T	Sox2_MA0143.3	-16	0	+	0	0	.
chr11	34890741	34890742	chr11:34890742:T:A	rs2915224	T	A	A	Sox2_MA0143.3	21	0	+	0	0	.
chr11	34907926	34907927	chr11:34907927:T:C	rs2025776	T	C	T	Sox2_MA0143.3	15	0	-	0	0	.
chr11	34911673	34911674	chr11:34911674:C:T	rs7126659	C	T	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr11	34928412	34928413	chr11:34928413:T:G	rs115466527	T	G	T	Sox2_MA0143.3	26	0	+	0	0	.
chr11	34949137	34949138	chr11:34949138:T:C	rs114111934	T	C	T	Sox2_MA0143.3	14	0	+	0	0	.
chr11	35046660	35046661	chr11:35046661:A:G	rs666197	A	G	G	Sox2_MA0143.3	24	0	+	0	0	.
chr11	35058374	35058375	chr11:35058375:T:G	rs2553774	T	G	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr11	35091227	35091228	chr11:35091228:G:A	rs10768112	G	A	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr11	35144418	35144419	chr11:35144419:G:A	rs17445923	G	A	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr11	35176946	35176947	chr11:35176947:C:T	rs151338790	C	T	C	Sox2_MA0143.3	18	0	+	0	0	.
chr11	35190740	35190741	chr11:35190741:A:G	rs7930724	A	G	G	Sox2_MA0143.3	11	0	+	0	0	.
chr11	35231585	35231586	chr11:35231586:C:T	rs10836347	C	T	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr11	35238320	35238321	chr11:35238321:A:T	rs191126106	A	T	A	Sox2_MA0143.3	-16	0	+	0	0	.
chr11	35238334	35238335	chr11:35238335:G:C	rs10742335	G	C	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr11	35238346	35238347	chr11:35238347:C:T	rs11033035	C	T	C	Sox2_MA0143.3	10	0	+	0	0	.
chr11	35241590	35241591	chr11:35241591:A:G	rs4756201	A	G	G	Sox2_MA0143.3	15	0	-	0	0	.
chr11	35249871	35249872	chr11:35249872:G:A	rs10836356	G	A	A	Sox2_MA0143.3	23	0	-	0	0	.
chr11	35311140	35311141	chr11:35311141:T:C	rs117079949	T	C	T	Sox2_MA0143.3	-8	0	-	0	0	.
chr11	35313120	35313121	chr11:35313121:C:T	rs17379710	C	T	C	Sox2_MA0143.3	16	0	+	0	0	.
chr11	35349282	35349283	chr11:35349283:A:G	rs4755398	A	G	A	Sox2_MA0143.3	8	0	-	0	0	.
chr11	35395078	35395079	chr11:35395079:C:T	rs11033110	C	T	C	Sox2_MA0143.3	16	0	-	0	0	.
chr11	35439965	35439966	chr11:35439966:A:G	rs1148935	A	G	A	Sox2_MA0143.3	-5	0	-	0	0	.
chr11	35534470	35534471	chr11:35534471:C:G	rs1173906	C	G	G	Sox2_MA0143.3	5	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr11	35545812	35545813	chr11:35545813:T:C	rs11033170	T	C	T	Sox2_MA0143.3	23	0	+	0	0	.
chr11	35555323	35555324	chr11:35555324:A:G	rs11033177	A	G	A	Sox2_MA0143.3	-7	0	+	0	0	.
chr11	35588582	35588583	chr11:35588583:T:C	rs666311	T	C	C	Sox2_MA0143.3	13	0	-	0	0	.
chr11	35616122	35616123	chr11:35616123:C:T	rs12418696	C	T	C	Sox2_MA0143.3	12	0	-	0	0	.
chr11	35813417	35813418	chr11:35813418:A:G	rs2970318	A	G	.	Sox2_MA0143.3	3	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr11	35849665	35849666	chr11:35849666:A:G	rs632322	A	G	.	Sox2_MA0143.3	-9	0	+	0	0	.
chr11	35906069	35906070	chr11:35906070:C:G	rs530774417	C	G	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr11	35908351	35908352	chr11:35908352:C:G	rs1398474	C	G	G	Sox2_MA0143.3	-5	0	+	0	0	.
chr11	35919554	35919555	chr11:35919555:T:C	rs76386505	T	C	T	Sox2_MA0143.3	-16	0	+	0	0	.
chr11	35919582	35919583	chr11:35919583:T:C	rs12421300	T	C	T	Sox2_MA0143.3	12	0	+	0	0	.
chr11	36031030	36031031	chr11:36031031:C:T	rs141501709	C	T	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr11	36046827	36046828	chr11:36046828:A:G	rs76125704	A	G	A	Sox2_MA0143.3	10	0	+	0	0	.
chr11	36070885	36070886	chr11:36070886:C:T	rs993117407	C	T	C	Sox2_MA0143.3	13	0	+	0	0	.
chr11	36073451	36073452	chr11:36073452:C:T	rs1159805645	C	T	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr11	36128936	36128937	chr11:36128937:A:C	rs7106469	A	C	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr11	36146411	36146412	chr11:36146412:T:C	rs529748823	T	C	T	Sox2_MA0143.3	24	0	+	0	0	.
chr11	36156443	36156444	chr11:36156444:C:T	rs183792417	C	T	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr11	36185905	36185906	chr11:36185906:C:G	rs7125444	C	G	C	Sox2_MA0143.3	15	0	+	0	0	.
chr11	36241387	36241388	chr11:36241388:T:A	rs1526058	T	A	A	Sox2_MA0143.3	3	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr11	36253295	36253296	chr11:36253296:G:A	rs61879278	G	A	G	Sox2_MA0143.3	-12	0	+	0	0	.
chr11	36253323	36253324	chr11:36253324:C:T	rs10742366	C	T	C	Sox2_MA0143.3	16	0	+	0	0	.
chr11	36289306	36289307	chr11:36289307:C:A	rs80169046	C	A	C	Sox2_MA0143.3	20	0	-	0	0	.
chr11	36294371	36294372	chr11:36294372:C:T	rs12796405	C	T	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr11	36315082	36315083	chr11:36315083:T:C	rs17742101	T	C	T	Sox2_MA0143.3	21	0	-	0	0	.
chr11	36315091	36315092	chr11:36315092:T:C	rs72948137	T	C	T	Sox2_MA0143.3	12	0	-	0	0	.
chr11	36318882	36318883	chr11:36318883:A:G	rs80193511	A	G	A	Sox2_MA0143.3	9	0	-	0	0	.
chr11	36361793	36361794	chr11:36361794:T:C	rs146471059	T	C	T	Sox2_MA0143.3	3	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr11	36361807	36361808	chr11:36361808:C:T	rs73443190	C	T	C	Sox2_MA0143.3	17	0	+	0	0	.
chr11	36363685	36363686	chr11:36363686:G:A	rs17615296	G	A	G	Sox2_MA0143.3	0	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr11	36390124	36390125	chr11:36390125:T:C	rs11825083	T	C	T	Sox2_MA0143.3	16	0	-	0	0	.
chr11	36452748	36452749	chr11:36452749:C:T	rs7483893	C	T	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr11	36455256	36455257	chr11:36455257:G:A	rs992922885	G	A	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr11	36463851	36463852	chr11:36463852:T:A	rs12291542	T	A	T	Sox2_MA0143.3	-11	0	-	0	0	.
chr11	36541172	36541173	chr11:36541173:A:G	rs1290684117	A	G	A	Sox2_MA0143.3	-7	0	-	0	0	.
chr11	36937893	36937894	chr11:36937894:A:G	rs7932782	A	G	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr11	36949346	36949347	chr11:36949347:G:A	rs7931014	G	A	A	Sox2_MA0143.3	-14	0	+	0	0	.
chr11	37117962	37117963	chr11:37117963:T:A	rs2126179	T	A	T	Sox2_MA0143.3	23	0	+	0	0	.
chr11	37145357	37145358	chr11:37145358:A:G	rs2169331	A	G	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr11	37275972	37275973	chr11:37275973:A:G	rs1916067	A	G	A	Sox2_MA0143.3	15	0	+	0	0	.
chr11	37532578	37532579	chr11:37532579:T:C	rs11034200	T	C	T	Sox2_MA0143.3	18	0	+	0	0	.
chr11	37709571	37709572	chr11:37709572:C:T	rs59444127	C	T	c	Sox2_MA0143.3	-12	0	+	0	0	.
chr11	37721621	37721622	chr11:37721622:G:A	rs16930562	G	A	G	Sox2_MA0143.3	20	0	-	0	0	.
chr11	37723986	37723987	chr11:37723987:T:C	rs77778538	T	C	T	Sox2_MA0143.3	6	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr11	37724935	37724936	chr11:37724936:G:A	rs76822542	G	A	g	Sox2_MA0143.3	22	0	-	0	0	.
chr11	37786768	37786769	chr11:37786769:C:G	rs7105500	C	G	C	Sox2_MA0143.3	5	1	-	8.676919043985553	1.7681642646703324	CCATTGTG
chr11	37788554	37788555	chr11:37788555:C:G	rs113777909	C	G	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr11	37907604	37907605	chr11:37907605:T:C	rs115659436	T	C	T	Sox2_MA0143.3	26	0	+	0	0	.
chr11	37942386	37942387	chr11:37942387:G:T	rs56385653	G	T	T	Sox2_MA0143.3	23	0	+	0	0	.
chr11	37988368	37988369	chr11:37988369:G:T	rs12277547	G	T	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr11	38422050	38422051	chr11:38422051:G:C	rs16931760	G	C	G	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr11	38569727	38569728	chr11:38569728:C:T	rs75669536	C	T	C	Sox2_MA0143.3	-12	0	-	0	0	.
chr11	38601534	38601535	chr11:38601535:C:T	rs4457724	C	T	T	Sox2_MA0143.3	0	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr11	38819942	38819943	chr11:38819943:T:A	rs10837053	T	A	T	Sox2_MA0143.3	-12	0	-	0	0	.
chr11	39247723	39247724	chr11:39247724:A:G	rs11035177	A	G	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr11	39247743	39247744	chr11:39247744:G:T	rs11035178	G	T	T	Sox2_MA0143.3	13	0	+	0	0	.
chr11	39727683	39727684	chr11:39727684:T:C	rs76177742	T	C	T	Sox2_MA0143.3	21	0	-	0	0	.
chr11	39818486	39818487	chr11:39818487:T:A	rs16933975	T	A	T	Sox2_MA0143.3	20	0	+	0	0	.
chr11	40128740	40128741	chr11:40128741:C:A	rs12577341	C	A	A	Sox2_MA0143.3	-8	0	+	0	0	.
chr11	40276759	40276760	chr11:40276760:T:C	rs16934668	T	C	T	Sox2_MA0143.3	16	0	+	0	0	.
chr11	40531379	40531380	chr11:40531380:C:T	rs1495305	C	T	C	Sox2_MA0143.3	23	0	-	0	0	.
chr11	40593168	40593169	chr11:40593169:C:A	rs11035946	C	A	C	Sox2_MA0143.3	12	0	-	0	0	.
chr11	40925437	40925438	chr11:40925438:C:A	rs12421406	C	A	C	Sox2_MA0143.3	25	0	-	0	0	.
chr11	40925457	40925458	chr11:40925458:C:A	rs12421408	C	A	C	Sox2_MA0143.3	5	1	-	9.613475778572903	2.7047209992576837	CCATTGTT
chr11	41044555	41044556	chr11:41044556:A:G	rs355219	A	G	G	Sox2_MA0143.3	14	0	-	0	0	.
chr11	41059336	41059337	chr11:41059337:A:C	rs355257	A	C	A	Sox2_MA0143.3	-11	0	-	0	0	.
chr11	41486591	41486592	chr11:41486592:T:C	rs1218454015	T	C	T	Sox2_MA0143.3	-2	0	-	0	0	.
chr11	41578621	41578622	chr11:41578622:G:A	rs4755576	G	A	A	Sox2_MA0143.3	-5	0	+	0	0	.
chr11	41705244	41705245	chr11:41705245:T:C	rs11036511	T	C	T	Sox2_MA0143.3	-14	0	-	0	0	.
chr11	41717385	41717386	chr11:41717386:A:T	rs287742	A	T	A	Sox2_MA0143.3	6	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr11	41754398	41754399	chr11:41754399:G:A	rs61877665	G	A	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr11	41973801	41973802	chr11:41973802:T:G	rs17553408	T	G	T	Sox2_MA0143.3	4	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr11	41973821	41973822	chr11:41973822:A:G	rs74695432	A	G	A	Sox2_MA0143.3	24	0	+	0	0	.
chr11	42319529	42319530	chr11:42319530:G:A	rs11603484	G	A	g	Sox2_MA0143.3	-13	0	+	0	0	.
chr11	42410867	42410868	chr11:42410868:T:C	rs4756722	T	C	C	Sox2_MA0143.3	15	0	+	0	0	.
chr11	42411881	42411882	chr11:42411882:T:A	rs35854325	T	A	A	Sox2_MA0143.3	-2	0	-	0	0	.
chr11	42507606	42507607	chr11:42507607:G:A	rs7114505	G	A	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr11	42631290	42631291	chr11:42631291:G:A	rs4128180	G	A	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr11	42670138	42670139	chr11:42670139:T:A	rs112240986	T	A	A	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr11	42670151	42670152	chr11:42670152:A:G	rs4466812	A	G	G	Sox2_MA0143.3	16	0	+	0	0	.
chr11	42773120	42773121	chr11:42773121:C:T	rs75404322	C	T	c	Sox2_MA0143.3	-20	0	+	0	0	.
chr11	42826134	42826135	chr11:42826135:T:A	rs6485359	T	A	T	Sox2_MA0143.3	21	0	-	0	0	.
chr11	42844022	42844023	chr11:42844023:A:G	rs4755666	A	G	G	Sox2_MA0143.3	14	0	+	0	0	.
chr11	42926238	42926239	chr11:42926239:C:T	rs34675564	C	T	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr11	42926252	42926253	chr11:42926253:A:G	rs1038672	A	G	G	Sox2_MA0143.3	12	0	+	0	0	.
chr11	43497433	43497434	chr11:43497434:G:A	rs117157596	G	A	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr11	43538440	43538441	chr11:43538441:C:A	rs10400240	C	A	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr11	43574573	43574574	chr11:43574574:C:G	rs76404889	C	G	C	Sox2_MA0143.3	7	1	+	9.206767037375712	8.864090315184848	CCTTTGTC
chr11	43739239	43739240	chr11:43739240:G:A	rs117272127	G	A	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr11	43810954	43810955	chr11:43810955:G:A	rs10400343	G	A	G	Sox2_MA0143.3	-12	0	+	0	0	.
chr11	43880385	43880386	chr11:43880386:A:G	rs17552136	A	G	A	Sox2_MA0143.3	12	0	-	0	0	.
chr11	43920990	43920991	chr11:43920991:A:G	rs1351084862	A	G	A	Sox2_MA0143.3	-11	0	+	0	0	.
chr11	44136887	44136888	chr11:44136888:A:G	rs4379834	A	G	A	Sox2_MA0143.3	21	0	-	0	0	.
chr11	44267632	44267633	chr11:44267633:C:T	rs75147697	C	T	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr11	44290760	44290761	chr11:44290761:G:A	rs141041624	G	A	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr11	44374385	44374386	chr11:44374386:G:C	rs56307845	G	C	G	Sox2_MA0143.3	12	0	-	0	0	.
chr11	44409313	44409314	chr11:44409314:T:C	rs2902408	T	C	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr11	44450791	44450792	chr11:44450792:G:C	chr11:44450792:G:C	G	C	G	Sox2_MA0143.3	0	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr11	44450791	44450792	chr11:44450792:G:T	rs7119538	G	T	G	Sox2_MA0143.3	0	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr11	44450827	44450828	chr11:44450828:G:A	rs782411	G	A	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr11	44523613	44523614	chr11:44523614:C:T	rs536642799	C	T	C	Sox2_MA0143.3	12	0	-	0	0	.
chr11	44611617	44611618	chr11:44611618:C:T	rs11820017	C	T	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr11	44673733	44673734	chr11:44673734:A:T	rs7483461	A	T	T	Sox2_MA0143.3	4	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr11	44719607	44719608	chr11:44719608:A:C	rs6485569	A	C	A	Sox2_MA0143.3	16	0	+	0	0	.
chr11	44761917	44761918	chr11:44761918:T:C	rs77359752	T	C	T	Sox2_MA0143.3	4	1	+	9.206767037375712	2.2980122580604916	CCTTTGTC
chr11	44766991	44766992	chr11:44766992:C:A	rs4755890	C	A	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr11	44814896	44814897	chr11:44814897:G:A	rs3923246	G	A	G	Sox2_MA0143.3	18	0	-	0	0	.
chr11	44911961	44911962	chr11:44911962:C:G	rs11038204	C	G	C	Sox2_MA0143.3	9	0	+	0	0	.
chr11	44911976	44911977	chr11:44911977:A:G	rs3937802	A	G	a	Sox2_MA0143.3	24	0	+	0	0	.
chr11	44923227	44923228	chr11:44923228:G:A	rs10769097	G	A	G	Sox2_MA0143.3	-11	0	+	0	0	.
chr11	44980150	44980151	chr11:44980151:T:C	rs12271690	T	C	C	Sox2_MA0143.3	-12	0	-	0	0	.
chr11	44981914	44981915	chr11:44981915:C:T	rs11038242	C	T	T	Sox2_MA0143.3	16	0	+	0	0	.
chr11	45027050	45027051	chr11:45027051:C:T	rs12293703	C	T	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr11	45076673	45076674	chr11:45076674:T:C	rs60467122	T	C	T	Sox2_MA0143.3	-8	0	-	0	0	.
chr11	45083489	45083490	chr11:45083490:C:T	rs966905	C	T	T	Sox2_MA0143.3	12	0	+	0	0	.
chr11	45171574	45171575	chr11:45171575:G:T	rs12363718	G	T	G	Sox2_MA0143.3	-3	0	+	0	0	.
chr11	45198890	45198891	chr11:45198891:C:T	rs77175072	C	T	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr11	45287650	45287651	chr11:45287651:G:A	rs7395421	G	A	G	Sox2_MA0143.3	10	0	-	0	0	.
chr11	45367070	45367071	chr11:45367071:A:G	rs2242044	A	G	G	Sox2_MA0143.3	27	0	-	0	0	.
chr11	45367087	45367088	chr11:45367088:G:A	rs142557043	G	A	G	Sox2_MA0143.3	10	0	-	0	0	.
chr11	45374626	45374627	chr11:45374627:A:C	rs76436144	A	C	A	Sox2_MA0143.3	-9	0	-	0	0	.
chr11	45375086	45375087	chr11:45375087:A:G	rs78856578	A	G	A	Sox2_MA0143.3	26	0	-	0	0	.
chr11	45381884	45381885	chr11:45381885:A:G	rs1530872	A	G	A	Sox2_MA0143.3	-9	0	+	0	0	.
chr11	45414629	45414630	chr11:45414630:A:G	rs11602544	A	G	A	Sox2_MA0143.3	17	0	+	0	0	.
chr11	45501431	45501432	chr11:45501432:T:C	rs59517129	T	C	T	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr11	45583538	45583539	chr11:45583539:T:C	rs275590	T	C	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr11	45594001	45594002	chr11:45594002:G:A	rs16938317	G	A	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr11	45604351	45604352	chr11:45604352:G:T	chr11:45604352:G:T	G	T	G	Sox2_MA0143.3	26	0	-	0	0	.
chr11	45605703	45605704	chr11:45605704:C:T	rs145952184	C	T	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr11	45628056	45628057	chr11:45628057:C:A	rs10769156	C	A	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr11	45678246	45678247	chr11:45678247:C:G	rs11038613	C	G	G	Sox2_MA0143.3	-14	0	+	0	0	.
chr11	45678948	45678949	chr11:45678949:G:A	rs10769163	G	A	G	Sox2_MA0143.3	5	1	+	9.206767037375712	2.298012258060492	CCTTTGTC
chr11	45688787	45688788	chr11:45688788:A:G	rs2666894	A	G	A	Sox2_MA0143.3	-11	0	-	0	0	.
chr11	45698712	45698713	chr11:45698713:C:T	rs61884969	C	T	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr11	45745594	45745595	chr11:45745595:C:T	rs2666908	C	T	T	Sox2_MA0143.3	22	0	-	0	0	.
chr11	45791761	45791762	chr11:45791762:A:G	rs11038658	A	G	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr11	45799530	45799531	chr11:45799531:G:A	rs145993286	G	A	G	Sox2_MA0143.3	1	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr11	45805713	45805714	chr11:45805714:T:G	rs546865255	T	G	T	Sox2_MA0143.3	-13	0	-	0	0	.
chr11	45807056	45807057	chr11:45807057:C:A	rs895952681	C	A	C	Sox2_MA0143.3	19	0	+	0	0	.
chr11	45913145	45913146	chr11:45913146:T:G	rs4505038	T	G	T	Sox2_MA0143.3	17	0	-	0	0	.
chr11	45965216	45965217	chr11:45965217:T:C	rs139871532	T	C	T	Sox2_MA0143.3	-9	0	-	0	0	.
chr11	45996587	45996588	chr11:45996588:C:T	rs2959101	C	T	T	Sox2_MA0143.3	16	0	-	0	0	.
chr11	46120613	46120614	chr11:46120614:G:C	rs1044131035	G	C	G	Sox2_MA0143.3	25	0	+	0	0	.
chr11	46159539	46159540	chr11:46159540:C:G	rs9300054	C	G	G	Sox2_MA0143.3	20	0	-	0	0	.
chr11	46261372	46261373	chr11:46261373:C:G	rs7105423	C	G	G	Sox2_MA0143.3	15	0	+	0	0	.
chr11	46295769	46295770	chr11:46295770:C:T	rs542371354	C	T	C	Sox2_MA0143.3	21	0	+	0	0	.
chr11	46299683	46299684	chr11:46299684:C:G	rs11038856	C	G	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr11	46308597	46308598	chr11:46308598:G:C	rs73461899	G	C	G	Sox2_MA0143.3	13	0	+	0	0	.
chr11	46367897	46367898	chr11:46367898:G:C	rs11038876	G	C	G	Sox2_MA0143.3	27	0	-	0	0	.
chr11	46443810	46443811	chr11:46443811:C:T	rs75494138	C	T	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr11	46675737	46675738	chr11:46675738:A:G	chr11:46675738:A:G	A	G	A	Sox2_MA0143.3	10	0	+	0	0	.
chr11	46676717	46676718	chr11:46676718:C:T	rs750392706	C	T	C	Sox2_MA0143.3	13	0	+	0	0	.
chr11	47134578	47134579	chr11:47134579:G:A	rs72901627	G	A	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr11	47156398	47156399	chr11:47156399:A:G	rs540808083	A	G	A	Sox2_MA0143.3	23	0	-	0	0	.
chr11	47164920	47164921	chr11:47164921:C:T	rs145402984	C	T	C	Sox2_MA0143.3	13	0	-	0	0	.
chr11	47249223	47249224	chr11:47249224:C:T	rs3758668	C	T	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr11	47325708	47325709	chr11:47325709:C:T	rs7124958	C	T	C	Sox2_MA0143.3	-12	0	-	0	0	.
chr11	47361723	47361724	chr11:47361724:T:C	rs7105851	T	C	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr11	47485185	47485186	chr11:47485186:T:C	rs573183695	T	C	T	Sox2_MA0143.3	9	0	+	0	0	.
chr11	47515067	47515068	chr11:47515068:T:C	rs143179925	T	C	T	Sox2_MA0143.3	-9	0	-	0	0	.
chr11	47605252	47605253	chr11:47605253:C:A	rs143088995	C	A	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr11	47617457	47617458	chr11:47617458:C:A	rs12099130	C	A	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr11	47667790	47667791	chr11:47667791:C:T	rs10742817	C	T	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr11	47764861	47764862	chr11:47764862:A:G	rs10838760	A	G	A	Sox2_MA0143.3	-12	0	+	0	0	.
chr11	47779075	47779076	chr11:47779076:C:T	rs80090905	C	T	C	Sox2_MA0143.3	11	0	-	0	0	.
chr11	47881330	47881331	chr11:47881331:G:A	rs12364432	G	A	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr11	47921267	47921268	chr11:47921268:A:G	rs73460994	A	G	A	Sox2_MA0143.3	-5	0	+	0	0	.
chr11	47966943	47966944	chr11:47966944:G:A	rs1228000	G	A	A	Sox2_MA0143.3	9	0	+	0	0	.
chr11	47968343	47968344	chr11:47968344:G:A	rs12272781	G	A	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr11	48009087	48009088	chr11:48009088:A:G	rs1228034	A	G	A	Sox2_MA0143.3	4	1	-	8.676919043985553	1.7681642646703322	CCATTGTG
chr11	48054314	48054315	chr11:48054315:T:C	rs150757776	T	C	T	Sox2_MA0143.3	18	0	+	0	0	.
chr11	48096898	48096899	chr11:48096899:G:T	rs114497311	G	T	G	Sox2_MA0143.3	5	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr11	48096909	48096910	chr11:48096910:C:A	rs771692901	C	A	C	Sox2_MA0143.3	16	0	+	0	0	.
chr11	48105600	48105601	chr11:48105601:T:C	rs73466894	T	C	T	Sox2_MA0143.3	2	1	-	9.613475778572903	3.494828071296623	CCATTGTT
chr11	48190270	48190271	chr11:48190271:C:T	rs12577527	C	T	C	Sox2_MA0143.3	23	0	+	0	0	.
chr11	48341610	48341611	chr11:48341611:G:A	rs540086084	G	A	G	Sox2_MA0143.3	20	0	+	0	0	.
chr11	48391358	48391359	chr11:48391359:C:G	rs10838889	C	G	c	Sox2_MA0143.3	-4	0	+	0	0	.
chr11	48533640	48533641	chr11:48533641:C:G	rs12788866	C	G	c	Sox2_MA0143.3	-15	0	-	0	0	.
chr11	49012533	49012534	chr11:49012534:C:T	rs11040222	C	T	.	Sox2_MA0143.3	27	0	+	0	0	.
chr11	49269386	49269387	chr11:49269387:G:A	rs117908995	G	A	g	Sox2_MA0143.3	21	0	-	0	0	.
chr11	49386719	49386720	chr11:49386720:T:C	rs10839274	T	C	T	Sox2_MA0143.3	26	0	+	0	0	.
chr11	49389319	49389320	chr11:49389320:G:A	rs116862517	G	A	G	Sox2_MA0143.3	0	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr11	49405970	49405971	chr11:49405971:C:T	rs563725355	C	T	C	Sox2_MA0143.3	11	0	+	0	0	.
chr11	49850896	49850897	chr11:49850897:T:G	rs7925690	T	G	.	Sox2_MA0143.3	11	0	-	0	0	.
chr11	49889288	49889289	chr11:49889289:T:G	rs1794138	T	G	.	Sox2_MA0143.3	-8	0	-	0	0	.
chr11	50075242	50075243	chr11:50075243:C:T	rs36187379	C	T	c	Sox2_MA0143.3	27	0	+	0	0	.
chr11	52980209	52980210	chr11:52980210:A:T	rs1473822584	A	T	.	Sox2_MA0143.3	-14	0	+	0	0	.
chr11	54844236	54844237	chr11:54844237:A:G	rs34426539	A	G	.	Sox2_MA0143.3	-15	0	-	0	0	.
chr11	54865998	54865999	chr11:54865999:G:C	chr11:54865999:G:C	G	C	.	Sox2_MA0143.3	5	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr11	54947171	54947172	chr11:54947172:C:T	rs1273632686	C	T	.	Sox2_MA0143.3	5	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr11	55735318	55735319	chr11:55735319:G:T	rs12794455	G	T	G	Sox2_MA0143.3	14	0	-	0	0	.
chr11	56040500	56040501	chr11:56040501:G:A	rs2512923	G	A	G	Sox2_MA0143.3	-12	0	+	0	0	.
chr11	56067215	56067216	chr11:56067216:G:A	rs181646998	G	A	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr11	56087853	56087854	chr11:56087854:G:A	rs185955574	G	A	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr11	56176997	56176998	chr11:56176998:G:A	rs4489763	G	A	g	Sox2_MA0143.3	7	1	+	8.676919043985553	3.3675628303222993	CCATTGTG
chr11	56330134	56330135	chr11:56330135:T:C	rs72923568	T	C	T	Sox2_MA0143.3	2	1	-	9.613475778572903	3.494828071296623	CCATTGTT
chr11	56336980	56336981	chr11:56336981:T:G	rs12222334	T	G	T	Sox2_MA0143.3	3	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr11	56533624	56533625	chr11:56533625:A:G	rs13377553	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr11	56850067	56850068	chr11:56850068:G:A	rs560518	G	A	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr11	56916273	56916274	chr11:56916274:G:A	rs1793426	G	A	A	Sox2_MA0143.3	25	0	-	0	0	.
chr11	57101169	57101170	chr11:57101170:T:A	rs17151619	T	A	T	Sox2_MA0143.3	-14	0	-	0	0	.
chr11	57101170	57101171	chr11:57101171:G:A	rs10160364	G	A	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr11	57166364	57166365	chr11:57166365:C:T	rs1941036	C	T	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr11	57204229	57204230	chr11:57204230:A:G	rs61888863	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr11	57204242	57204243	chr11:57204243:G:A	rs11603531	G	A	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr11	57213364	57213365	chr11:57213365:G:A	rs12225155	G	A	G	Sox2_MA0143.3	0	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr11	57213378	57213379	chr11:57213379:T:G	rs74688290	T	G	T	Sox2_MA0143.3	-14	0	-	0	0	.
chr11	57289377	57289378	chr11:57289378:C:T	rs11605053	C	T	C	Sox2_MA0143.3	11	0	-	0	0	.
chr11	57294642	57294643	chr11:57294643:C:T	rs71484437	C	T	C	Sox2_MA0143.3	5	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr11	57381257	57381258	chr11:57381258:G:A	rs10400305	G	A	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr11	57459525	57459526	chr11:57459526:C:T	rs944361049	C	T	C	Sox2_MA0143.3	1	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr11	57568257	57568258	chr11:57568258:G:T	rs560286655	G	T	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr11	57568290	57568291	chr11:57568291:C:G	rs2234401	C	G	C	Sox2_MA0143.3	13	0	+	0	0	.
chr11	57614264	57614265	chr11:57614265:G:A	rs115479407	G	A	G	Sox2_MA0143.3	0	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr11	57633709	57633710	chr11:57633710:G:A	rs1647396	G	A	A	Sox2_MA0143.3	-13	0	-	0	0	.
chr11	57649140	57649141	chr11:57649141:A:G	rs565850450	A	G	A	Sox2_MA0143.3	-18	0	-	0	0	.
chr11	57713863	57713864	chr11:57713864:C:G	rs523985	C	G	C	Sox2_MA0143.3	5	1	-	9.019595766176417	2.110840986861197	CCATTGTC
chr11	57773043	57773044	chr11:57773044:G:A	rs537627	G	A	g	Sox2_MA0143.3	22	0	+	0	0	.
chr11	57778882	57778883	chr11:57778883:C:T	rs1045093395	C	T	C	Sox2_MA0143.3	1	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr11	57936206	57936207	chr11:57936207:C:T	rs77165219	C	T	C	Sox2_MA0143.3	25	0	-	0	0	.
chr11	58057421	58057422	chr11:58057422:T:G	rs2003375	T	G	T	Sox2_MA0143.3	-13	0	+	0	0	.
chr11	58143021	58143022	chr11:58143022:A:G	rs183525692	A	G	a	Sox2_MA0143.3	-18	0	+	0	0	.
chr11	58394655	58394656	chr11:58394656:C:T	rs181932840	C	T	c	Sox2_MA0143.3	-17	0	+	0	0	.
chr11	58394657	58394658	chr11:58394658:C:T	rs12798255	C	T	c	Sox2_MA0143.3	-15	0	+	0	0	.
chr11	58478054	58478055	chr11:58478055:C:G	rs2515341	C	G	C	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr11	58579925	58579926	chr11:58579926:T:G	rs11229533	T	G	T	Sox2_MA0143.3	-14	0	+	0	0	.
chr11	58619925	58619926	chr11:58619926:C:T	rs113311187	C	T	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr11	58844813	58844814	chr11:58844814:C:A	rs12419236	C	A	.	Sox2_MA0143.3	27	0	+	0	0	.
chr11	58913859	58913860	chr11:58913860:A:G	rs11229693	A	G	.	Sox2_MA0143.3	-4	0	-	0	0	.
chr11	58920153	58920154	chr11:58920154:C:A	rs11229695	C	A	.	Sox2_MA0143.3	-15	0	+	0	0	.
chr11	59011821	59011822	chr11:59011822:T:C	rs549248	T	C	.	Sox2_MA0143.3	20	0	-	0	0	.
chr11	59011851	59011852	chr11:59011852:T:C	rs73485216	T	C	.	Sox2_MA0143.3	-10	0	-	0	0	.
chr11	59011855	59011856	chr11:59011856:A:T	rs113105381	A	T	.	Sox2_MA0143.3	-14	0	-	0	0	.
chr11	59173570	59173571	chr11:59173571:A:G	rs897619175	A	G	A	Sox2_MA0143.3	16	0	+	0	0	.
chr11	59192243	59192244	chr11:59192244:G:A	rs151058472	G	A	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr11	59551197	59551198	chr11:59551198:T:C	rs77865378	T	C	.	Sox2_MA0143.3	26	0	-	0	0	.
chr11	59730684	59730685	chr11:59730685:C:T	rs472152	C	T	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr11	60085095	60085096	chr11:60085096:C:T	rs554311	C	T	.	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr11	60085122	60085123	chr11:60085123:C:T	rs12361312	C	T	.	Sox2_MA0143.3	27	0	+	0	0	.
chr11	60193839	60193840	chr11:60193840:C:T	rs895194762	C	T	.	Sox2_MA0143.3	11	0	+	0	0	.
chr11	60334162	60334163	chr11:60334163:T:C	rs142796293	T	C	T	Sox2_MA0143.3	11	0	-	0	0	.
chr11	60334167	60334168	chr11:60334168:A:G	rs555837863	A	G	A	Sox2_MA0143.3	6	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr11	60348221	60348222	chr11:60348222:G:T	rs77904860	G	T	g	Sox2_MA0143.3	10	0	-	0	0	.
chr11	60378348	60378349	chr11:60378349:G:A	rs2233239	G	A	G	Sox2_MA0143.3	25	0	-	0	0	.
chr11	60378384	60378385	chr11:60378385:A:T	rs146395343	A	T	A	Sox2_MA0143.3	-11	0	-	0	0	.
chr11	60379873	60379874	chr11:60379874:C:T	rs1838095	C	T	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr11	60389883	60389884	chr11:60389884:G:A	rs17154896	G	A	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr11	60498564	60498565	chr11:60498565:T:C	rs7928551	T	C	t	Sox2_MA0143.3	11	0	-	0	0	.
chr11	60498585	60498586	chr11:60498586:C:G	rs7939173	C	G	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr11	60684047	60684048	chr11:60684048:G:A	rs11230447	G	A	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr11	60753342	60753343	chr11:60753343:G:C	rs12287807	G	C	C	Sox2_MA0143.3	21	0	-	0	0	.
chr11	60840969	60840970	chr11:60840970:A:G	rs7106391	A	G	A	Sox2_MA0143.3	-7	0	-	0	0	.
chr11	60874851	60874852	chr11:60874852:G:A	rs2074418	G	A	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr11	60915469	60915470	chr11:60915470:A:C	rs72916996	A	C	G	Sox2_MA0143.3	20	0	-	0	0	.
chr11	61020030	61020031	chr11:61020031:A:G	rs117687302	A	G	A	Sox2_MA0143.3	17	0	-	0	0	.
chr11	61083411	61083412	chr11:61083412:C:T	rs115366489	C	T	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr11	61095383	61095384	chr11:61095384:A:T	rs656398	A	T	a	Sox2_MA0143.3	13	0	+	0	0	.
chr11	61119046	61119047	chr11:61119047:T:C	rs79811054	T	C	T	Sox2_MA0143.3	18	0	-	0	0	.
chr11	61127019	61127020	chr11:61127020:G:T	rs2186409	G	T	T	Sox2_MA0143.3	9	0	-	0	0	.
chr11	61143648	61143649	chr11:61143649:T:C	rs10897145	T	C	C	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr11	61149798	61149799	chr11:61149799:G:A	rs181746296	G	A	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr11	61191114	61191115	chr11:61191115:G:A	rs615800	G	A	g	Sox2_MA0143.3	18	0	-	0	0	.
chr11	61295282	61295283	chr11:61295283:G:A	rs183529474	G	A	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr11	61336306	61336307	chr11:61336307:G:A	rs117666757	G	A	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr11	61361525	61361526	chr11:61361526:A:G	rs1336137058	A	G	A	Sox2_MA0143.3	-19	0	-	0	0	.
chr11	61362572	61362573	chr11:61362573:A:C	chr11:61362573:A:C	A	C	A	Sox2_MA0143.3	6	1	-	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr11	61362574	61362575	chr11:61362575:A:G	chr11:61362575:A:G	A	G	A	Sox2_MA0143.3	4	1	-	3.5547341015215945	-3.3540206777936254	CCTTTGTA
chr11	61536330	61536331	chr11:61536331:C:T	rs1794072	C	T	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr11	61568070	61568071	chr11:61568071:C:T	rs973895152	C	T	C	Sox2_MA0143.3	-5	0	-	0	0	.
chr11	61612855	61612856	chr11:61612856:T:A	rs72914277	T	A	A	Sox2_MA0143.3	23	0	+	0	0	.
chr11	61676886	61676887	chr11:61676887:C:A	chr11:61676887:C:A	C	A	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr11	61697201	61697202	chr11:61697202:A:G	rs72918068	A	G	A	Sox2_MA0143.3	-4	0	+	0	0	.
chr11	61756646	61756647	chr11:61756647:G:A	rs198462	G	A	G	Sox2_MA0143.3	21	0	-	0	0	.
chr11	61756683	61756684	chr11:61756684:C:T	rs141178555	C	T	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr11	61769787	61769788	chr11:61769788:G:A	rs76675349	G	A	G	Sox2_MA0143.3	9	0	-	0	0	.
chr11	61791938	61791939	chr11:61791939:G:A	rs781537474	G	A	G	Sox2_MA0143.3	12	0	+	0	0	.
chr11	61851189	61851190	chr11:61851190:C:T	rs540058666	C	T	C	Sox2_MA0143.3	-12	0	-	0	0	.
chr11	61950242	61950243	chr11:61950243:T:C	rs972353	T	C	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr11	61971669	61971670	chr11:61971670:G:C	rs57398279	G	C	g	Sox2_MA0143.3	-18	0	-	0	0	.
chr11	61972222	61972223	chr11:61972223:G:C	rs200120424	G	C	G	Sox2_MA0143.3	15	0	-	0	0	.
chr11	61972223	61972224	chr11:61972224:G:C	rs573594944	G	C	G	Sox2_MA0143.3	14	0	-	0	0	.
chr11	61972254	61972255	chr11:61972255:G:C	rs753997969	G	C	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr11	61996888	61996889	chr11:61996889:G:A	rs7117044	G	A	g	Sox2_MA0143.3	-17	0	+	0	0	.
chr11	61997156	61997157	chr11:61997157:C:G	rs956810865	C	G	c	Sox2_MA0143.3	-14	0	+	0	0	.
chr11	62018775	62018776	chr11:62018776:C:T	rs59934262	C	T	C	Sox2_MA0143.3	25	0	+	0	0	.
chr11	62019440	62019441	chr11:62019441:G:A	rs12422044	G	A	G	Sox2_MA0143.3	8	0	-	0	0	.
chr11	62049790	62049791	chr11:62049791:C:T	rs34848597	C	T	C	Sox2_MA0143.3	24	0	-	0	0	.
chr11	62138901	62138902	chr11:62138902:T:C	rs1675126	T	C	C	Sox2_MA0143.3	2	1	-	9.613475778572903	3.494828071296623	CCATTGTT
chr11	62139391	62139392	chr11:62139392:G:A	rs3781974	G	A	G	Sox2_MA0143.3	-2	0	+	0	0	.
chr11	62152096	62152097	chr11:62152097:G:C	rs117392689	G	C	G	Sox2_MA0143.3	21	0	+	0	0	.
chr11	62180233	62180234	chr11:62180234:A:G	rs12789264	A	G	A	Sox2_MA0143.3	-12	0	+	0	0	.
chr11	62313219	62313220	chr11:62313220:C:T	rs2513039	C	T	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr11	62416790	62416791	chr11:62416791:T:A	rs143317135	T	A	T	Sox2_MA0143.3	-15	0	-	0	0	.
chr11	62433529	62433530	chr11:62433530:T:C	rs17663676	T	C	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr11	62445491	62445492	chr11:62445492:T:A	rs2509986	T	A	T	Sox2_MA0143.3	23	0	-	0	0	.
chr11	62445497	62445498	chr11:62445498:C:T	rs145904570	C	T	C	Sox2_MA0143.3	17	0	-	0	0	.
chr11	62548722	62548723	chr11:62548723:C:G	rs11231138	C	G	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr11	62549064	62549065	chr11:62549065:G:T	rs549940498	G	T	G	Sox2_MA0143.3	26	0	+	0	0	.
chr11	62591797	62591798	chr11:62591798:G:A	rs182182349	G	A	G	Sox2_MA0143.3	16	0	-	0	0	.
chr11	62593143	62593144	chr11:62593144:C:T	rs574932067	C	T	C	Sox2_MA0143.3	18	0	+	0	0	.
chr11	62593564	62593565	chr11:62593565:T:C	rs1058678	T	C	T	Sox2_MA0143.3	-10	0	-	0	0	.
chr11	62601489	62601490	chr11:62601490:C:A	rs371611790	C	A	C	Sox2_MA0143.3	-5	0	-	0	0	.
chr11	63001510	63001511	chr11:63001511:C:A	rs984008563	C	A	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr11	63146652	63146653	chr11:63146653:G:A	rs1939771	G	A	G	Sox2_MA0143.3	7	1	+	8.676919043985553	3.3675628303222993	CCATTGTG
chr11	63165705	63165706	chr11:63165706:G:A	rs993239861	G	A	G	Sox2_MA0143.3	0	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr11	63418874	63418875	chr11:63418875:A:G	rs523493	A	G	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr11	63445857	63445858	chr11:63445858:C:T	rs886170875	C	T	C	Sox2_MA0143.3	12	0	-	0	0	.
chr11	63448902	63448903	chr11:63448903:T:A	rs10501393	T	A	T	Sox2_MA0143.3	4	1	+	8.676919043985553	1.7681642646703322	CCATTGTG
chr11	63508090	63508091	chr11:63508091:C:T	rs10897430	C	T	T	Sox2_MA0143.3	13	0	+	0	0	.
chr11	63561065	63561066	chr11:63561066:G:A	chr11:63561066:G:A	G	A	G	Sox2_MA0143.3	14	0	-	0	0	.
chr11	63561072	63561073	chr11:63561073:C:A	rs112742689	C	A	C	Sox2_MA0143.3	7	1	-	8.864090315184848	9.800647049772198	CCTTTGTG
chr11	63561095	63561096	chr11:63561096:G:A	rs181064776	G	A	G	Sox2_MA0143.3	-16	0	-	0	0	.
chr11	63603570	63603571	chr11:63603571:C:T	rs112205388	C	T	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr11	63766492	63766493	chr11:63766493:G:A	rs61928236	G	A	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr11	63784625	63784626	chr11:63784626:T:C	rs6591821	T	C	T	Sox2_MA0143.3	23	0	-	0	0	.
chr11	63784633	63784634	chr11:63784634:C:G	rs6591822	C	G	C	Sox2_MA0143.3	15	0	-	0	0	.
chr11	63841598	63841599	chr11:63841599:G:C	chr11:63841599:G:C	G	C	G	Sox2_MA0143.3	14	0	+	0	0	.
chr11	63847549	63847550	chr11:63847550:T:C	chr11:63847550:T:C	T	C	T	Sox2_MA0143.3	21	0	-	0	0	.
chr11	63862360	63862361	chr11:63862361:T:G	rs111553771	T	G	T	Sox2_MA0143.3	-14	0	+	0	0	.
chr11	63880051	63880052	chr11:63880052:A:C	rs11231628	A	C	C	Sox2_MA0143.3	25	0	-	0	0	.
chr11	63986677	63986678	chr11:63986678:G:A	rs552834352	G	A	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr11	64185000	64185001	chr11:64185001:G:A	rs1254543727	G	A	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr11	64224328	64224329	chr11:64224329:T:C	rs1059440	T	C	T	Sox2_MA0143.3	2	1	-	8.676919043985553	2.5582713367092715	CCATTGTG
chr11	64301667	64301668	chr11:64301668:C:T	rs7111985	C	T	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr11	64322401	64322402	chr11:64322402:C:T	rs4930702	C	T	C	Sox2_MA0143.3	9	0	+	0	0	.
chr11	64342948	64342949	chr11:64342949:A:C	rs547858488	A	C	A	Sox2_MA0143.3	21	0	-	0	0	.
chr11	64342949	64342950	chr11:64342950:A:T	rs11601860	A	T	A	Sox2_MA0143.3	20	0	-	0	0	.
chr11	64342967	64342968	chr11:64342968:A:G	rs151020179	A	G	A	Sox2_MA0143.3	2	1	-	8.864090315184848	2.5582713367092715	CCTTTGTG
chr11	64342978	64342979	chr11:64342979:A:G	rs373637964	A	G	A	Sox2_MA0143.3	-9	0	-	0	0	.
chr11	64378812	64378813	chr11:64378813:C:T	rs372676552	C	T	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr11	64378816	64378817	chr11:64378817:C:G	rs641168	C	G	C	Sox2_MA0143.3	0	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr11	64386085	64386086	chr11:64386086:A:G	rs620690	A	G	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr11	64448257	64448258	chr11:64448258:T:C	rs12286249	T	C	T	Sox2_MA0143.3	13	0	+	0	0	.
chr11	64489386	64489387	chr11:64489387:C:A	rs17299124	C	A	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr11	64531857	64531858	chr11:64531858:G:A	rs7939462	G	A	G	Sox2_MA0143.3	15	0	-	0	0	.
chr11	64571889	64571890	chr11:64571890:G:A	chr11:64571890:G:A	G	A	G	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr11	64571889	64571890	chr11:64571890:G:C	rs76289299	G	C	G	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr11	64686288	64686289	chr11:64686289:C:T	rs72927012	C	T	C	Sox2_MA0143.3	13	0	-	0	0	.
chr11	64752453	64752454	chr11:64752454:G:C	rs114138772	G	C	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr11	64779130	64779131	chr11:64779131:C:T	rs776138971	C	T	C	Sox2_MA0143.3	1	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr11	64779140	64779141	chr11:64779141:A:C	rs71526478	A	C	A	Sox2_MA0143.3	11	0	+	0	0	.
chr11	64879369	64879370	chr11:64879370:A:G	rs589556	A	G	G	Sox2_MA0143.3	3	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr11	64879387	64879388	chr11:64879388:A:G	rs654580	A	G	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr11	64888884	64888885	chr11:64888885:G:A	rs656982	G	A	G	Sox2_MA0143.3	13	0	+	0	0	.
chr11	65024781	65024782	chr11:65024782:A:G	rs486984	A	G	G	Sox2_MA0143.3	14	0	+	0	0	.
chr11	65112990	65112991	chr11:65112991:G:T	rs116673027	G	T	G	Sox2_MA0143.3	26	0	+	0	0	.
chr11	65260329	65260330	chr11:65260330:A:G	rs71462337	A	G	A	Sox2_MA0143.3	-6	0	+	0	0	.
chr11	65413390	65413391	chr11:65413391:T:G	rs61895450	T	G	t	Sox2_MA0143.3	-19	0	+	0	0	.
chr11	65420502	65420503	chr11:65420503:A:G	rs75505587	A	G	A	Sox2_MA0143.3	2	1	-	8.864090315184848	2.5582713367092715	CCTTTGTG
chr11	65438545	65438546	chr11:65438546:C:T	rs673753	C	T	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr11	65438581	65438582	chr11:65438582:T:C	chr11:65438582:T:C	T	C	T	Sox2_MA0143.3	22	0	+	0	0	.
chr11	65448867	65448868	chr11:65448868:C:T	rs61893773	C	T	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr11	65448868	65448869	chr11:65448869:G:A	rs79464383	G	A	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr11	65494540	65494541	chr11:65494541:T:C	rs144838304	T	C	T	Sox2_MA0143.3	13	0	+	0	0	.
chr11	65497327	65497328	chr11:65497328:G:A	rs1053881244	G	A	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr11	65498983	65498984	chr11:65498984:C:A	rs138307674	C	A	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr11	65616689	65616690	chr11:65616690:C:G	rs150949221	C	G	C	Sox2_MA0143.3	13	0	+	0	0	.
chr11	65640414	65640415	chr11:65640415:C:T	rs61893816	C	T	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr11	65645224	65645225	chr11:65645225:T:C	rs72939178	T	C	T	Sox2_MA0143.3	24	0	+	0	0	.
chr11	65803667	65803668	chr11:65803668:G:T	rs11227304	G	T	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr11	65814338	65814339	chr11:65814339:C:G	rs149441852	C	G	C	Sox2_MA0143.3	14	0	-	0	0	.
chr11	65856047	65856048	chr11:65856048:G:A	rs4621	G	A	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr11	65860154	65860155	chr11:65860155:T:C	rs631101	T	C	T	Sox2_MA0143.3	6	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr11	65984292	65984293	chr11:65984293:C:T	rs503524	C	T	C	Sox2_MA0143.3	-20	0	-	0	0	.
chr11	65989336	65989337	chr11:65989337:T:C	rs538954	T	C	T	Sox2_MA0143.3	-11	0	-	0	0	.
chr11	66075221	66075222	chr11:66075222:C:T	rs4604890	C	T	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr11	66112363	66112364	chr11:66112364:T:C	rs519911	T	C	C	Sox2_MA0143.3	6	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr11	66142020	66142021	chr11:66142021:G:A	rs941311281	G	A	G	Sox2_MA0143.3	17	0	+	0	0	.
chr11	66183353	66183354	chr11:66183354:T:C	rs10896091	T	C	T	Sox2_MA0143.3	10	0	-	0	0	.
chr11	66292829	66292830	chr11:66292830:G:T	rs1938916	G	T	G	Sox2_MA0143.3	-3	0	+	0	0	.
chr11	66297519	66297520	chr11:66297520:G:C	rs479315	G	C	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr11	66299192	66299193	chr11:66299193:A:G	rs4930351	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr11	66348143	66348144	chr11:66348144:C:T	rs758800748	C	T	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr11	66415776	66415777	chr11:66415777:G:A	rs61468422	G	A	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr11	66510587	66510588	chr11:66510588:C:G	rs1791688	C	G	G	Sox2_MA0143.3	13	0	+	0	0	.
chr11	66880611	66880612	chr11:66880612:A:G	rs7103627	A	G	A	Sox2_MA0143.3	10	0	-	0	0	.
chr11	66950496	66950497	chr11:66950497:A:G	rs76964426	A	G	A	Sox2_MA0143.3	11	0	-	0	0	.
chr11	67015122	67015123	chr11:67015123:G:T	rs1253440	G	T	G	Sox2_MA0143.3	1	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr11	67116186	67116187	chr11:67116187:C:T	rs117506904	C	T	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr11	67117741	67117742	chr11:67117742:C:T	rs117538255	C	T	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr11	67242621	67242622	chr11:67242622:A:T	rs80153645	A	T	A	Sox2_MA0143.3	17	0	-	0	0	.
chr11	67259105	67259106	chr11:67259106:G:A	rs112908999	G	A	G	Sox2_MA0143.3	13	0	-	0	0	.
chr11	67276776	67276777	chr11:67276777:T:C	rs143183928	T	C	T	Sox2_MA0143.3	-17	0	+	0	0	.
chr11	67290063	67290064	chr11:67290064:C:T	rs111345048	C	T	C	Sox2_MA0143.3	13	0	+	0	0	.
chr11	67315780	67315781	chr11:67315781:T:C	rs7934433	T	C	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr11	67385268	67385269	chr11:67385269:G:T	rs71457775	G	T	G	Sox2_MA0143.3	5	1	+	9.206767037375712	2.298012258060492	CCTTTGTC
chr11	67410508	67410509	chr11:67410509:A:C	rs529579057	A	C	A	Sox2_MA0143.3	2	1	-	9.206767037375712	2.900948058900136	CCTTTGTC
chr11	67423977	67423978	chr11:67423978:T:C	rs1790747	T	C	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr11	67487698	67487699	chr11:67487699:T:C	rs581525	T	C	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr11	67580690	67580691	chr11:67580691:A:G	rs7945035	A	G	A	Sox2_MA0143.3	-5	0	-	0	0	.
chr11	67626867	67626868	chr11:67626868:C:A	rs149961268	C	A	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr11	67637548	67637549	chr11:67637549:T:C	rs4930462	T	C	A	Sox2_MA0143.3	24	0	-	0	0	.
chr11	67642817	67642818	chr11:67642818:T:C	rs148549665	T	C	T	Sox2_MA0143.3	-15	0	-	0	0	.
chr11	67652856	67652857	chr11:67652857:G:A	rs61894522	G	A	g	Sox2_MA0143.3	-6	0	-	0	0	.
chr11	67727257	67727258	chr11:67727258:G:A	rs12420178	G	A	-	Sox2_MA0143.3	-18	0	-	0	0	.
chr11	67785785	67785786	chr11:67785786:G:A	rs1054647060	G	A	-	Sox2_MA0143.3	7	1	+	8.864090315184848	3.5547341015215945	CCTTTGTG
chr11	67850013	67850014	chr11:67850014:C:T	rs72472200	C	T	-	Sox2_MA0143.3	27	0	+	0	0	.
chr11	67884262	67884263	chr11:67884263:G:A	rs11501524	G	A	-	Sox2_MA0143.3	9	0	-	0	0	.
chr11	67884262	67884263	chr11:67884263:G:C	chr11:67884263:G:C	G	C	-	Sox2_MA0143.3	9	0	-	0	0	.
chr11	67900474	67900475	chr11:67900475:G:A	rs1961725	G	A	-	Sox2_MA0143.3	-10	0	-	0	0	.
chr11	68013561	68013562	chr11:68013562:G:A	rs138593335	G	A	g	Sox2_MA0143.3	-5	0	+	0	0	.
chr11	68013573	68013574	chr11:68013574:C:T	chr11:68013574:C:T	C	T	c	Sox2_MA0143.3	7	1	+	9.206767037375712	9.800647049772198	CCTTTGTC
chr11	68120278	68120279	chr11:68120279:G:A	rs79792945	G	A	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr11	68213864	68213865	chr11:68213865:A:C	rs993170586	A	C	a	Sox2_MA0143.3	-8	0	-	0	0	.
chr11	68219217	68219218	chr11:68219218:T:G	rs4345973	T	G	t	Sox2_MA0143.3	20	0	+	0	0	.
chr11	68309769	68309770	chr11:68309770:T:C	rs312009	T	C	C	Sox2_MA0143.3	16	0	+	0	0	.
chr11	68347452	68347453	chr11:68347453:A:G	rs312782	A	G	G	Sox2_MA0143.3	24	0	-	0	0	.
chr11	68354826	68354827	chr11:68354827:T:G	rs312788	T	G	.	Sox2_MA0143.3	3	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr11	68396556	68396557	chr11:68396557:G:T	rs562926290	G	T	G	Sox2_MA0143.3	1	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr11	68396561	68396562	chr11:68396562:A:G	rs571313686	A	G	A	Sox2_MA0143.3	-4	0	-	0	0	.
chr11	68424877	68424878	chr11:68424878:T:G	rs599083	T	G	T	Sox2_MA0143.3	27	0	+	0	0	.
chr11	68441534	68441535	chr11:68441535:G:A	rs76178575	G	A	g	Sox2_MA0143.3	-20	0	-	0	0	.
chr11	68470493	68470494	chr11:68470494:G:A	rs36032837	G	A	G	Sox2_MA0143.3	-11	0	+	0	0	.
chr11	68504740	68504741	chr11:68504741:A:G	rs536180969	A	G	A	Sox2_MA0143.3	-13	0	+	0	0	.
chr11	68584371	68584372	chr11:68584372:A:T	rs60142486	A	T	A	Sox2_MA0143.3	-12	0	-	0	0	.
chr11	68781254	68781255	chr11:68781255:C:T	rs3829242	C	T	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr11	68915461	68915462	chr11:68915462:G:A	rs34897804	G	A	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr11	68924672	68924673	chr11:68924673:T:C	rs685320	T	C	C	Sox2_MA0143.3	18	0	-	0	0	.
chr11	68948620	68948621	chr11:68948621:C:T	rs11228417	C	T	C	Sox2_MA0143.3	0	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr11	68991464	68991465	chr11:68991465:C:T	rs2602819	C	T	C	Sox2_MA0143.3	13	0	+	0	0	.
chr11	69056354	69056355	chr11:69056355:C:T	rs3018686	C	T	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr11	69135996	69135997	chr11:69135997:G:C	rs10896437	G	C	G	Sox2_MA0143.3	15	0	+	0	0	.
chr11	69168583	69168584	chr11:69168584:C:T	rs78615582	C	T	C	Sox2_MA0143.3	19	0	+	0	0	.
chr11	69178892	69178893	chr11:69178893:G:C	rs4930657	G	C	G	Sox2_MA0143.3	19	0	-	0	0	.
chr11	69179389	69179390	chr11:69179390:A:G	rs12417953	A	G	A	Sox2_MA0143.3	20	0	-	0	0	.
chr11	69211180	69211181	chr11:69211181:G:T	rs4357697	G	T	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr11	69281025	69281026	chr11:69281026:A:G	rs117062896	A	G	A	Sox2_MA0143.3	-15	0	+	0	0	.
chr11	69287947	69287948	chr11:69287948:T:C	rs12275849	T	C	T	Sox2_MA0143.3	4	1	+	8.864090315184848	1.9553355358696274	CCTTTGTG
chr11	69311183	69311184	chr11:69311184:C:T	rs72932105	C	T	C	Sox2_MA0143.3	23	0	-	0	0	.
chr11	69338091	69338092	chr11:69338092:C:A	rs12794313	C	A	C	Sox2_MA0143.3	22	0	+	0	0	.
chr11	69383218	69383219	chr11:69383219:T:A	rs12146485	T	A	T	Sox2_MA0143.3	22	0	+	0	0	.
chr11	69392745	69392746	chr11:69392746:C:A	rs757815980	C	A	C	Sox2_MA0143.3	19	0	+	0	0	.
chr11	69420579	69420580	chr11:69420580:C:G	rs7121817	C	G	C	Sox2_MA0143.3	15	0	+	0	0	.
chr11	69426263	69426264	chr11:69426264:G:A	rs10796817	G	A	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr11	69430782	69430783	chr11:69430783:G:A	rs77645471	G	A	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr11	69488620	69488621	chr11:69488621:C:A	rs117193760	C	A	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr11	69488628	69488629	chr11:69488629:C:T	rs773503568	C	T	c	Sox2_MA0143.3	-11	0	-	0	0	.
chr11	69497470	69497471	chr11:69497471:G:A	rs1430468729	G	A	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr11	69497476	69497477	chr11:69497477:T:C	rs647340	T	C	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr11	69601167	69601168	chr11:69601168:C:T	rs11600406	C	T	C	Sox2_MA0143.3	20	0	+	0	0	.
chr11	69617911	69617912	chr11:69617912:A:T	rs656388	A	T	T	Sox2_MA0143.3	20	0	+	0	0	.
chr11	69628194	69628195	chr11:69628195:A:G	rs1982774	A	G	a	Sox2_MA0143.3	11	0	+	0	0	.
chr11	69642132	69642133	chr11:69642133:G:C	rs3017621	G	C	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr11	69646962	69646963	chr11:69646963:C:T	rs647451	C	T	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr11	69667299	69667300	chr11:69667300:A:G	rs61360017	A	G	.	Sox2_MA0143.3	12	0	-	0	0	.
chr11	69721237	69721238	chr11:69721238:C:A	chr11:69721238:C:A	C	A	C	Sox2_MA0143.3	7	1	-	8.676919043985553	9.613475778572903	CCATTGTG
chr11	69729644	69729645	chr11:69729645:G:A	rs138774536	G	A	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr11	69888334	69888335	chr11:69888335:T:C	rs7950402	T	C	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr11	69890711	69890712	chr11:69890712:G:C	rs28600876	G	C	G	Sox2_MA0143.3	21	0	-	0	0	.
chr11	69956654	69956655	chr11:69956655:T:C	rs3867283	T	C	C	Sox2_MA0143.3	12	0	+	0	0	.
chr11	69966119	69966120	chr11:69966120:A:T	rs35542921	A	T	A	Sox2_MA0143.3	-9	0	-	0	0	.
chr11	69981740	69981741	chr11:69981741:T:C	rs4980706	T	C	C	Sox2_MA0143.3	4	1	+	8.864090315184848	1.9553355358696274	CCTTTGTG
chr11	70000097	70000098	chr11:70000098:T:C	rs7111795	T	C	T	Sox2_MA0143.3	6	1	+	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr11	70017184	70017185	chr11:70017185:C:T	rs990179	C	T	C	Sox2_MA0143.3	14	0	-	0	0	.
chr11	70063875	70063876	chr11:70063876:A:C	rs4980762	A	C	A	Sox2_MA0143.3	-13	0	+	0	0	.
chr11	70066145	70066146	chr11:70066146:A:G	rs75341943	A	G	A	Sox2_MA0143.3	-12	0	+	0	0	.
chr11	70074178	70074179	chr11:70074179:C:T	rs367928486	C	T	C	Sox2_MA0143.3	11	0	-	0	0	.
chr11	70091733	70091734	chr11:70091734:G:C	rs10898153	G	C	G	Sox2_MA0143.3	11	0	+	0	0	.
chr11	70116941	70116942	chr11:70116942:C:T	rs61885477	C	T	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr11	70142465	70142466	chr11:70142466:G:A	rs114487171	G	A	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr11	70279248	70279249	chr11:70279249:T:C	rs895925707	T	C	T	Sox2_MA0143.3	-2	0	+	0	0	.
chr11	70286673	70286674	chr11:70286674:C:T	rs11235739	C	T	T	Sox2_MA0143.3	13	0	+	0	0	.
chr11	70288659	70288660	chr11:70288660:C:T	rs17160762	C	T	C	Sox2_MA0143.3	8	0	+	0	0	.
chr11	70354419	70354420	chr11:70354420:C:G	rs7943276	C	G	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr11	70354422	70354423	chr11:70354423:C:T	rs17853270	C	T	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr11	70371515	70371516	chr11:70371516:C:T	rs73521327	C	T	c	Sox2_MA0143.3	-4	0	+	0	0	.
chr11	70416272	70416273	chr11:70416273:T:G	rs12800598	T	G	T	Sox2_MA0143.3	19	0	+	0	0	.
chr11	70416276	70416277	chr11:70416277:C:T	rs146571859	C	T	G	Sox2_MA0143.3	23	0	+	0	0	.
chr11	70472084	70472085	chr11:70472085:T:A	rs114467567	T	A	T	Sox2_MA0143.3	6	1	+	8.676919043985553	1.7681642646703326	CCATTGTG
chr11	70491680	70491681	chr11:70491681:C:T	rs494197	C	T	C	Sox2_MA0143.3	12	0	-	0	0	.
chr11	70510780	70510781	chr11:70510781:C:G	rs115500453	C	G	C	Sox2_MA0143.3	5	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr11	70545277	70545278	chr11:70545278:C:G	rs77059926	C	G	C	Sox2_MA0143.3	17	0	+	0	0	.
chr11	70604759	70604760	chr11:70604760:T:C	rs55818720	T	C	C	Sox2_MA0143.3	2	1	-	8.676919043985553	2.5582713367092715	CCATTGTG
chr11	70614227	70614228	chr11:70614228:C:T	rs112666956	C	T	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr11	70703293	70703294	chr11:70703294:G:A	chr11:70703294:G:A	G	A	G	Sox2_MA0143.3	-2	0	+	0	0	.
chr11	70703319	70703320	chr11:70703320:T:C	rs2154979	T	C	T	Sox2_MA0143.3	24	0	+	0	0	.
chr11	70927860	70927861	chr11:70927861:G:A	rs7944247	G	A	A	Sox2_MA0143.3	1	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr11	71117421	71117422	chr11:71117422:C:G	rs4608106	C	G	C	Sox2_MA0143.3	1	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr11	71139277	71139278	chr11:71139278:C:T	rs146084223	C	T	C	Sox2_MA0143.3	8	0	-	0	0	.
chr11	71153655	71153656	chr11:71153656:T:C	rs12274841	T	C	C	Sox2_MA0143.3	4	1	+	3.5547341015215945	-3.3540206777936254	CCTTTGTA
chr11	71198239	71198240	chr11:71198240:T:C	rs113120501	T	C	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr11	71237851	71237852	chr11:71237852:T:C	rs57661690	T	C	C	Sox2_MA0143.3	-12	0	-	0	0	.
chr11	71281138	71281139	chr11:71281139:G:A	rs76337826	G	A	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr11	71281153	71281154	chr11:71281154:A:G	rs11828709	A	G	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr11	71342485	71342486	chr11:71342486:C:A	rs7932973	C	A	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr11	71349899	71349900	chr11:71349900:G:T	rs11603444	G	T	G	Sox2_MA0143.3	11	0	-	0	0	.
chr11	71372762	71372763	chr11:71372763:T:C	rs935081	T	C	T	Sox2_MA0143.3	2	1	-	9.019595766176417	2.900948058900136	CCATTGTC
chr11	71374470	71374471	chr11:71374471:A:G	rs1660883	A	G	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr11	71411104	71411105	chr11:71411105:A:T	rs2511277	A	T	T	Sox2_MA0143.3	21	0	+	0	0	.
chr11	71418695	71418696	chr11:71418696:A:G	rs74995878	A	G	A	Sox2_MA0143.3	9	0	-	0	0	.
chr11	71443685	71443686	chr11:71443686:C:T	rs576363566	C	T	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr11	71451811	71451812	chr11:71451812:G:T	rs72954301	G	T	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr11	71451830	71451831	chr11:71451831:A:G	rs59601821	A	G	A	Sox2_MA0143.3	18	0	+	0	0	.
chr11	71458601	71458602	chr11:71458602:A:G	rs2276361	A	G	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr11	71472643	71472644	chr11:71472644:C:A	rs4435028	C	A	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr11	71477797	71477798	chr11:71477798:G:C	rs139779824	G	C	G	Sox2_MA0143.3	11	0	+	0	0	.
chr11	71501960	71501961	chr11:71501961:C:G	rs751389	C	G	G	Sox2_MA0143.3	9	0	+	0	0	.
chr11	71534084	71534085	chr11:71534085:G:A	rs6592186	G	A	-	Sox2_MA0143.3	24	0	+	0	0	.
chr11	71628514	71628515	chr11:71628515:T:C	rs2004160	T	C	c	Sox2_MA0143.3	19	0	-	0	0	.
chr11	71744568	71744569	chr11:71744569:C:T	rs187417187	C	T	-	Sox2_MA0143.3	0	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr11	72000894	72000895	chr11:72000895:T:C	rs1573503	T	C	C	Sox2_MA0143.3	3	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr11	72006826	72006827	chr11:72006827:T:C	rs2735787	T	C	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr11	72139677	72139678	chr11:72139678:C:T	rs1802608	C	T	C	Sox2_MA0143.3	24	0	+	0	0	.
chr11	72141415	72141416	chr11:72141416:T:C	rs77546838	T	C	T	Sox2_MA0143.3	24	0	+	0	0	.
chr11	72511537	72511538	chr11:72511538:A:G	rs61895724	A	G	A	Sox2_MA0143.3	2	1	+	9.613475778572903	3.494828071296623	CCATTGTT
chr11	72564736	72564737	chr11:72564737:C:T	rs7112131	C	T	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr11	72617211	72617212	chr11:72617212:C:T	rs74338241	C	T	C	Sox2_MA0143.3	1	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr11	72639722	72639723	chr11:72639723:C:T	rs527441703	C	T	C	Sox2_MA0143.3	21	0	-	0	0	.
chr11	72653102	72653103	chr11:72653103:G:C	rs11604034	G	C	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr11	72653140	72653141	chr11:72653141:G:A	rs75345748	G	A	G	Sox2_MA0143.3	18	0	+	0	0	.
chr11	72754605	72754606	chr11:72754606:G:A	rs35094163	G	A	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr11	72761290	72761291	chr11:72761291:G:T	rs12287481	G	T	T	Sox2_MA0143.3	-19	0	-	0	0	.
chr11	72816844	72816845	chr11:72816845:C:T	rs201194597	C	T	C	Sox2_MA0143.3	13	0	-	0	0	.
chr11	72971562	72971563	chr11:72971563:T:C	rs148679298	T	C	T	Sox2_MA0143.3	11	0	-	0	0	.
chr11	73182681	73182682	chr11:73182682:C:T	rs114923870	C	T	c	Sox2_MA0143.3	-2	0	-	0	0	.
chr11	73189260	73189261	chr11:73189261:C:T	rs79750124	C	T	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr11	73195153	73195154	chr11:73195154:G:A	rs115442958	G	A	G	Sox2_MA0143.3	10	0	-	0	0	.
chr11	73198247	73198248	chr11:73198248:T:C	rs547920	T	C	T	Sox2_MA0143.3	-5	0	+	0	0	.
chr11	73216073	73216074	chr11:73216074:G:A	rs557451	G	A	A	Sox2_MA0143.3	1	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr11	73237880	73237881	chr11:73237881:C:A	rs949141	C	A	C	Sox2_MA0143.3	11	0	+	0	0	.
chr11	73237886	73237887	chr11:73237887:C:T	rs114472906	C	T	C	Sox2_MA0143.3	17	0	+	0	0	.
chr11	73242297	73242298	chr11:73242298:C:T	rs949140	C	T	T	Sox2_MA0143.3	26	0	+	0	0	.
chr11	73270471	73270472	chr11:73270472:C:T	rs149212229	C	T	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr11	73270499	73270500	chr11:73270500:A:G	rs1416002925	A	G	A	Sox2_MA0143.3	16	0	+	0	0	.
chr11	73295676	73295677	chr11:73295677:A:G	rs74785380	A	G	A	Sox2_MA0143.3	14	0	+	0	0	.
chr11	73412466	73412467	chr11:73412467:C:T	rs73542967	C	T	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr11	73521836	73521837	chr11:73521837:T:G	rs1047639830	T	G	T	Sox2_MA0143.3	-4	0	-	0	0	.
chr11	73538333	73538334	chr11:73538334:C:A	rs1939381	C	A	A	Sox2_MA0143.3	-16	0	-	0	0	.
chr11	73554959	73554960	chr11:73554960:G:A	rs11235803	G	A	G	Sox2_MA0143.3	9	0	-	0	0	.
chr11	73646133	73646134	chr11:73646134:G:A	rs640151	G	A	g	Sox2_MA0143.3	-6	0	-	0	0	.
chr11	73646135	73646136	chr11:73646136:A:C	rs640153	A	C	c	Sox2_MA0143.3	-8	0	-	0	0	.
chr11	73652536	73652537	chr11:73652537:G:A	rs149127415	G	A	G	Sox2_MA0143.3	21	0	-	0	0	.
chr11	73652549	73652550	chr11:73652550:C:G	rs954567415	C	G	C	Sox2_MA0143.3	8	0	-	0	0	.
chr11	73667096	73667097	chr11:73667097:T:C	rs12274970	T	C	t	Sox2_MA0143.3	22	0	-	0	0	.
chr11	73866815	73866816	chr11:73866816:C:T	rs74417199	C	T	C	Sox2_MA0143.3	5	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr11	73869382	73869383	chr11:73869383:A:G	rs72982926	A	G	A	Sox2_MA0143.3	7	1	+	3.5547341015215945	8.864090315184848	CCTTTGTA
chr11	73969580	73969581	chr11:73969581:T:C	rs112858040	T	C	C	Sox2_MA0143.3	17	0	+	0	0	.
chr11	73969581	73969582	chr11:73969582:G:A	rs115599075	G	A	G	Sox2_MA0143.3	18	0	+	0	0	.
chr11	73980224	73980225	chr11:73980225:G:A	rs78360495	G	A	G	Sox2_MA0143.3	-9	0	+	0	0	.
chr11	73996713	73996714	chr11:73996714:A:G	rs635441	A	G	G	Sox2_MA0143.3	14	0	+	0	0	.
chr11	74171100	74171101	chr11:74171101:T:C	chr11:74171101:T:C	T	C	T	Sox2_MA0143.3	16	0	+	0	0	.
chr11	74171214	74171215	chr11:74171215:T:G	rs1726746	T	G	G	Sox2_MA0143.3	12	0	+	0	0	.
chr11	74306972	74306973	chr11:74306973:G:A	rs73550769	G	A	A	Sox2_MA0143.3	23	0	+	0	0	.
chr11	74397208	74397209	chr11:74397209:C:T	rs147267327	C	T	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr11	74447091	74447092	chr11:74447092:T:C	rs141116292	T	C	T	Sox2_MA0143.3	-9	0	-	0	0	.
chr11	74577280	74577281	chr11:74577281:C:G	rs4944048	C	G	G	Sox2_MA0143.3	25	0	+	0	0	.
chr11	74670135	74670136	chr11:74670136:A:G	rs7129492	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr11	74695140	74695141	chr11:74695141:A:G	rs11236217	A	G	A	Sox2_MA0143.3	-3	0	-	0	0	.
chr11	74822333	74822334	chr11:74822334:C:G	rs759460640	C	G	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr11	75152237	75152238	chr11:75152238:T:A	rs2712810	T	A	A	Sox2_MA0143.3	-17	0	-	0	0	.
chr11	75212728	75212729	chr11:75212729:C:T	rs17133831	C	T	T	Sox2_MA0143.3	19	0	-	0	0	.
chr11	75352175	75352176	chr11:75352176:C:T	chr11:75352176:C:T	C	T	c	Sox2_MA0143.3	12	0	+	0	0	.
chr11	75455119	75455120	chr11:75455120:G:A	rs56207324	G	A	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr11	75497305	75497306	chr11:75497306:T:C	rs628972	T	C	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr11	75498638	75498639	chr11:75498639:C:G	rs1540211	C	G	C	Sox2_MA0143.3	5	1	-	9.613475778572903	2.7047209992576837	CCATTGTT
chr11	75512519	75512520	chr11:75512520:G:A	rs1783550	G	A	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr11	75522832	75522833	chr11:75522833:C:T	rs1619612	C	T	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr11	75525030	75525031	chr11:75525031:G:T	rs115258263	G	T	G	Sox2_MA0143.3	16	0	-	0	0	.
chr11	75525031	75525032	chr11:75525032:A:G	rs80235095	A	G	G	Sox2_MA0143.3	15	0	-	0	0	.
chr11	75526177	75526178	chr11:75526178:G:C	rs546306065	G	C	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr11	75526177	75526178	chr11:75526178:G:T	chr11:75526178:G:T	G	T	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr11	75536825	75536826	chr11:75536826:C:G	rs66570634	C	G	G	Sox2_MA0143.3	21	0	+	0	0	.
chr11	75574352	75574353	chr11:75574353:A:G	rs138520359	A	G	A	Sox2_MA0143.3	-3	0	+	0	0	.
chr11	75583151	75583152	chr11:75583152:G:A	rs574522597	G	A	G	Sox2_MA0143.3	-9	0	+	0	0	.
chr11	75597852	75597853	chr11:75597853:A:G	rs895127096	A	G	A	Sox2_MA0143.3	2	1	+	8.676919043985553	2.5582713367092715	CCATTGTG
chr11	76031116	76031117	chr11:76031117:T:C	rs17810603	T	C	T	Sox2_MA0143.3	3	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr11	76178260	76178261	chr11:76178261:T:A	rs9787835	T	A	T	Sox2_MA0143.3	-19	0	-	0	0	.
chr11	76206553	76206554	chr11:76206554:C:T	rs140577461	C	T	c	Sox2_MA0143.3	21	0	-	0	0	.
chr11	76212752	76212753	chr11:76212753:G:C	rs59588493	G	C	G	Sox2_MA0143.3	13	0	+	0	0	.
chr11	76241605	76241606	chr11:76241606:G:A	rs651729	G	A	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr11	76249427	76249428	chr11:76249428:C:A	rs631948	C	A	A	Sox2_MA0143.3	5	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr11	76251163	76251164	chr11:76251164:G:T	rs150813219	G	T	G	Sox2_MA0143.3	-3	0	+	0	0	.
chr11	76258666	76258667	chr11:76258667:T:C	rs183311201	T	C	T	Sox2_MA0143.3	16	0	+	0	0	.
chr11	76262033	76262034	chr11:76262034:T:C	rs603232	T	C	C	Sox2_MA0143.3	15	0	+	0	0	.
chr11	76288550	76288551	chr11:76288551:C:A	rs11236688	C	A	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr11	76323197	76323198	chr11:76323198:C:T	rs2004607	C	T	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr11	76330063	76330064	chr11:76330064:T:C	rs7117609	T	C	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr11	76330097	76330098	chr11:76330098:C:T	rs77160080	C	T	C	Sox2_MA0143.3	19	0	+	0	0	.
chr11	76414285	76414286	chr11:76414286:C:A	rs7927515	C	A	C	Sox2_MA0143.3	18	0	+	0	0	.
chr11	76444238	76444239	chr11:76444239:A:G	rs115279610	A	G	A	Sox2_MA0143.3	22	0	-	0	0	.
chr11	76455634	76455635	chr11:76455635:A:G	rs78131992	A	G	A	Sox2_MA0143.3	6	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr11	76604071	76604072	chr11:76604072:C:G	rs56654030	C	G	G	Sox2_MA0143.3	-16	0	-	0	0	.
chr11	76608491	76608492	chr11:76608492:T:C	rs10899238	T	C	T	Sox2_MA0143.3	-16	0	-	0	0	.
chr11	76624379	76624380	chr11:76624380:C:G	rs11236810	C	G	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr11	76627171	76627172	chr11:76627172:A:C	rs117047079	A	C	A	Sox2_MA0143.3	21	0	-	0	0	.
chr11	76655480	76655481	chr11:76655481:G:A	rs61893515	G	A	G	Sox2_MA0143.3	21	0	-	0	0	.
chr11	76666492	76666493	chr11:76666493:T:C	rs116894477	T	C	T	Sox2_MA0143.3	-14	0	+	0	0	.
chr11	76683161	76683162	chr11:76683162:C:T	rs72936113	C	T	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr11	76702712	76702713	chr11:76702713:G:T	rs7101752	G	T	G	Sox2_MA0143.3	20	0	-	0	0	.
chr11	76764985	76764986	chr11:76764986:C:A	rs12282785	C	A	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr11	76782020	76782021	chr11:76782021:G:A	rs66611299	G	A	G	Sox2_MA0143.3	22	0	-	0	0	.
chr11	76783715	76783716	chr11:76783716:T:C	rs75694075	T	C	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr11	76939312	76939313	chr11:76939313:G:T	rs72639138	G	T	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr11	76977212	76977213	chr11:76977213:G:A	rs7931869	G	A	G	Sox2_MA0143.3	18	0	+	0	0	.
chr11	77081975	77081976	chr11:77081976:A:G	rs10160300	A	G	G	Sox2_MA0143.3	23	0	+	0	0	.
chr11	77300802	77300803	chr11:77300803:C:T	rs1793470	C	T	T	Sox2_MA0143.3	26	0	-	0	0	.
chr11	77396092	77396093	chr11:77396093:C:G	rs688212	C	G	G	Sox2_MA0143.3	5	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr11	77457575	77457576	chr11:77457576:A:C	rs73496868	A	C	A	Sox2_MA0143.3	4	1	-	9.800647049772198	2.8918922704569785	CCTTTGTT
chr11	77457588	77457589	chr11:77457589:G:C	rs3019257	G	C	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr11	77529578	77529579	chr11:77529579:A:T	rs12221551	A	T	A	Sox2_MA0143.3	-3	0	-	0	0	.
chr11	77995149	77995150	chr11:77995150:G:C	rs72941381	G	C	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr11	77995418	77995419	chr11:77995419:T:C	rs7125440	T	C	T	Sox2_MA0143.3	-8	0	-	0	0	.
chr11	78034897	78034898	chr11:78034898:C:A	rs4331134	C	A	c	Sox2_MA0143.3	27	0	+	0	0	.
chr11	78051642	78051643	chr11:78051643:C:A	rs143522845	C	A	C	Sox2_MA0143.3	-5	0	-	0	0	.
chr11	78085092	78085093	chr11:78085093:C:A	rs2154963	C	A	C	Sox2_MA0143.3	7	1	+	9.019595766176417	3.3675628303222993	CCATTGTC
chr11	78101080	78101081	chr11:78101081:G:A	rs493394	G	A	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr11	78214226	78214227	chr11:78214227:T:G	rs2450136	T	G	T	Sox2_MA0143.3	9	0	-	0	0	.
chr11	78215722	78215723	chr11:78215723:A:G	rs1046780	A	G	A	Sox2_MA0143.3	2	1	+	8.676919043985553	2.5582713367092715	CCATTGTG
chr11	78318999	78319000	chr11:78319000:T:C	rs7116611	T	C	T	Sox2_MA0143.3	-3	0	-	0	0	.
chr11	78333169	78333170	chr11:78333170:T:G	rs112555416	T	G	T	Sox2_MA0143.3	-7	0	-	0	0	.
chr11	78340563	78340564	chr11:78340564:T:C	rs10899475	T	C	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr11	78417230	78417231	chr11:78417231:C:T	rs914869203	C	T	C	Sox2_MA0143.3	25	0	+	0	0	.
chr11	78517019	78517020	chr11:78517020:T:C	rs140467290	T	C	T	Sox2_MA0143.3	24	0	-	0	0	.
chr11	78551359	78551360	chr11:78551360:A:C	rs80352643	A	C	A	Sox2_MA0143.3	9	0	-	0	0	.
chr11	78649275	78649276	chr11:78649276:C:T	rs12420296	C	T	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr11	78663868	78663869	chr11:78663869:C:T	rs2051454	C	T	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr11	78667636	78667637	chr11:78667637:T:A	rs79383141	T	A	T	Sox2_MA0143.3	23	0	+	0	0	.
chr11	78787816	78787817	chr11:78787817:A:G	rs1540123	A	G	G	Sox2_MA0143.3	13	0	-	0	0	.
chr11	78801176	78801177	chr11:78801177:T:A	rs473399	T	A	t	Sox2_MA0143.3	-14	0	-	0	0	.
chr11	78810173	78810174	chr11:78810174:C:T	rs370673932	C	T	C	Sox2_MA0143.3	-12	0	-	0	0	.
chr11	79046266	79046267	chr11:79046267:T:C	chr11:79046267:T:C	T	C	T	Sox2_MA0143.3	-18	0	+	0	0	.
chr11	79065146	79065147	chr11:79065147:T:C	rs7130258	T	C	C	Sox2_MA0143.3	6	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr11	79080555	79080556	chr11:79080556:A:G	rs10793357	A	G	G	Sox2_MA0143.3	26	0	+	0	0	.
chr11	79183191	79183192	chr11:79183192:G:A	rs1938823	G	A	A	Sox2_MA0143.3	19	0	-	0	0	.
chr11	79222023	79222024	chr11:79222024:A:G	rs567236	A	G	a	Sox2_MA0143.3	19	0	-	0	0	.
chr11	79236964	79236965	chr11:79236965:G:A	rs489724	G	A	A	Sox2_MA0143.3	-8	0	-	0	0	.
chr11	79269784	79269785	chr11:79269785:G:C	rs73510677	G	C	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr11	79313670	79313671	chr11:79313671:C:T	rs479540	C	T	C	Sox2_MA0143.3	7	1	+	9.019595766176417	9.613475778572903	CCATTGTC
chr11	79313676	79313677	chr11:79313677:T:A	rs7929906	T	A	T	Sox2_MA0143.3	13	0	+	0	0	.
chr11	79354055	79354056	chr11:79354056:C:T	rs530965	C	T	T	Sox2_MA0143.3	1	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr11	79406686	79406687	chr11:79406687:G:A	rs561857693	G	A	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr11	79616442	79616443	chr11:79616443:C:T	rs17138648	C	T	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr11	79911735	79911736	chr11:79911736:A:T	rs681822	A	T	A	Sox2_MA0143.3	19	0	+	0	0	.
chr11	79964547	79964548	chr11:79964548:C:G	rs61884342	C	G	C	Sox2_MA0143.3	12	0	-	0	0	.
chr11	79982347	79982348	chr11:79982348:T:G	rs493589	T	G	T	Sox2_MA0143.3	-4	0	-	0	0	.
chr11	80362586	80362587	chr11:80362587:C:T	rs1351247	C	T	T	Sox2_MA0143.3	-9	0	+	0	0	.
chr11	80368691	80368692	chr11:80368692:G:A	rs533855745	G	A	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr11	80699453	80699454	chr11:80699454:G:A	chr11:80699454:G:A	G	A	G	Sox2_MA0143.3	9	0	-	0	0	.
chr11	80699458	80699459	chr11:80699459:A:G	rs76821714	A	G	A	Sox2_MA0143.3	4	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr11	80746437	80746438	chr11:80746438:A:G	rs11232314	A	G	A	Sox2_MA0143.3	3	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr11	80862277	80862278	chr11:80862278:G:C	rs77996569	G	C	G	Sox2_MA0143.3	10	0	+	0	0	.
chr11	81190942	81190943	chr11:81190943:A:C	rs143679159	A	C	A	Sox2_MA0143.3	22	0	-	0	0	.
chr11	81213949	81213950	chr11:81213950:G:T	rs6591942	G	T	t	Sox2_MA0143.3	-9	0	-	0	0	.
chr11	81220240	81220241	chr11:81220241:T:C	rs17141801	T	C	T	Sox2_MA0143.3	7	1	+	9.800647049772198	9.206767037375712	CCTTTGTT
chr11	81303835	81303836	chr11:81303836:A:G	rs7123367	A	G	A	Sox2_MA0143.3	-13	0	-	0	0	.
chr11	81482254	81482255	chr11:81482255:G:A	rs10501515	G	A	G	Sox2_MA0143.3	13	0	-	0	0	.
chr11	81787832	81787833	chr11:81787833:G:C	rs7936801	G	C	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr11	81792654	81792655	chr11:81792655:A:T	rs73508065	A	T	A	Sox2_MA0143.3	-15	0	+	0	0	.
chr11	81800671	81800672	chr11:81800672:T:C	rs144904161	T	C	T	Sox2_MA0143.3	-9	0	-	0	0	.
chr11	81820916	81820917	chr11:81820917:A:C	rs1573583	A	C	C	Sox2_MA0143.3	11	0	+	0	0	.
chr11	81840600	81840601	chr11:81840601:C:A	rs12284866	C	A	C	Sox2_MA0143.3	25	0	-	0	0	.
chr11	81888480	81888481	chr11:81888481:T:G	rs1540193	T	G	T	Sox2_MA0143.3	22	0	+	0	0	.
chr11	82359936	82359937	chr11:82359937:C:T	rs10897961	C	T	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr11	82693153	82693154	chr11:82693154:G:A	rs6592079	G	A	A	Sox2_MA0143.3	1	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr11	82812780	82812781	chr11:82812781:T:C	rs2511867	T	C	T	Sox2_MA0143.3	4	1	+	3.5547341015215945	-3.3540206777936254	CCTTTGTA
chr11	82908334	82908335	chr11:82908335:C:T	rs75885816	C	T	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr11	82908361	82908362	chr11:82908362:G:A	rs113739524	G	A	G	Sox2_MA0143.3	18	0	+	0	0	.
chr11	83070918	83070919	chr11:83070919:G:A	rs75853224	G	A	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr11	83070920	83070921	chr11:83070921:T:G	rs71465531	T	G	T	Sox2_MA0143.3	-2	0	+	0	0	.
chr11	83220124	83220125	chr11:83220125:A:T	rs637309	A	T	A	Sox2_MA0143.3	17	0	+	0	0	.
chr11	83437115	83437116	chr11:83437116:C:A	rs114068721	C	A	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr11	83444596	83444597	chr11:83444597:A:C	rs2512665	A	C	A	Sox2_MA0143.3	4	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr11	83565200	83565201	chr11:83565201:C:A	rs558104	C	A	C	Sox2_MA0143.3	1	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr11	83565201	83565202	chr11:83565202:A:G	rs683125	A	G	A	Sox2_MA0143.3	2	1	+	8.676919043985553	2.5582713367092715	CCATTGTG
chr11	83694389	83694390	chr11:83694390:C:G	rs9888248	C	G	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr11	83694401	83694402	chr11:83694402:C:T	rs149410722	C	T	C	Sox2_MA0143.3	22	0	+	0	0	.
chr11	83778884	83778885	chr11:83778885:G:A	rs541323138	G	A	G	Sox2_MA0143.3	0	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr11	83918995	83918996	chr11:83918996:A:G	rs72947723	A	G	A	Sox2_MA0143.3	18	0	-	0	0	.
chr11	83921676	83921677	chr11:83921677:T:C	rs2852735	T	C	T	Sox2_MA0143.3	9	0	-	0	0	.
chr11	83979781	83979782	chr11:83979782:A:G	rs2514145	A	G	A	Sox2_MA0143.3	-8	0	-	0	0	.
chr11	83999444	83999445	chr11:83999445:C:T	rs1601091	C	T	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr11	84164735	84164736	chr11:84164736:T:C	rs9787893	T	C	T	Sox2_MA0143.3	27	0	-	0	0	.
chr11	84173967	84173968	chr11:84173968:T:C	rs1793039	T	C	C	Sox2_MA0143.3	2	1	+	9.800647049772198	3.494828071296623	CCTTTGTT
chr11	84183415	84183416	chr11:84183416:G:A	rs7943267	G	A	A	Sox2_MA0143.3	-10	0	+	0	0	.
chr11	84248135	84248136	chr11:84248136:G:A	rs12360734	G	A	G	Sox2_MA0143.3	17	0	-	0	0	.
chr11	84345923	84345924	chr11:84345924:C:T	rs4636699	C	T	C	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr11	84993576	84993577	chr11:84993577:C:T	rs141531305	C	T	C	Sox2_MA0143.3	12	0	+	0	0	.
chr11	85118370	85118371	chr11:85118371:T:C	rs74427247	T	C	T	Sox2_MA0143.3	22	0	+	0	0	.
chr11	85581265	85581266	chr11:85581266:C:T	rs7122887	C	T	T	Sox2_MA0143.3	-17	0	+	0	0	.
chr11	85742772	85742773	chr11:85742773:G:T	rs79641397	G	T	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr11	85751097	85751098	chr11:85751098:T:C	rs688741	T	C	T	Sox2_MA0143.3	-5	0	-	0	0	.
chr11	85769993	85769994	chr11:85769994:G:A	rs11234404	G	A	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr11	85828573	85828574	chr11:85828574:A:G	rs11234429	A	G	G	Sox2_MA0143.3	10	0	-	0	0	.
chr11	85923690	85923691	chr11:85923691:A:C	rs11825598	A	C	C	Sox2_MA0143.3	24	0	+	0	0	.
chr11	85962080	85962081	chr11:85962081:A:G	rs592314	A	G	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr11	85974402	85974403	chr11:85974403:G:C	rs574015523	G	C	G	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr11	86040811	86040812	chr11:86040812:C:A	rs664596	C	A	C	Sox2_MA0143.3	24	0	-	0	0	.
chr11	86040812	86040813	chr11:86040813:G:A	rs4943935	G	A	G	Sox2_MA0143.3	23	0	-	0	0	.
chr11	86040813	86040814	chr11:86040814:G:C	rs4943936	G	C	G	Sox2_MA0143.3	22	0	-	0	0	.
chr11	86040840	86040841	chr11:86040841:A:G	rs664629	A	G	A	Sox2_MA0143.3	-5	0	-	0	0	.
chr11	86043678	86043679	chr11:86043679:G:C	rs17817919	G	C	G	Sox2_MA0143.3	9	0	-	0	0	.
chr11	86068254	86068255	chr11:86068255:T:G	rs2509608	T	G	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr11	86068267	86068268	chr11:86068268:A:G	rs2458500	A	G	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr11	86291584	86291585	chr11:86291585:A:G	rs78105578	A	G	G	Sox2_MA0143.3	3	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr11	86435966	86435967	chr11:86435967:G:T	rs12270530	G	T	T	Sox2_MA0143.3	20	0	-	0	0	.
chr11	86435967	86435968	chr11:86435968:T:G	rs12277432	T	G	G	Sox2_MA0143.3	19	0	-	0	0	.
chr11	86476027	86476028	chr11:86476028:C:A	rs2511083	C	A	A	Sox2_MA0143.3	-20	0	+	0	0	.
chr11	86511666	86511667	chr11:86511667:G:A	rs79030792	G	A	G	Sox2_MA0143.3	24	0	+	0	0	.
chr11	86513032	86513033	chr11:86513033:T:C	rs761385886	T	C	T	Sox2_MA0143.3	22	0	-	0	0	.
chr11	86519597	86519598	chr11:86519598:G:C	rs114350716	G	C	G	Sox2_MA0143.3	21	0	-	0	0	.
chr11	86519622	86519623	chr11:86519623:G:A	rs72953612	G	A	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr11	86578704	86578705	chr11:86578705:C:T	rs78954729	C	T	C	Sox2_MA0143.3	26	0	+	0	0	.
chr11	86592709	86592710	chr11:86592710:C:G	rs116906610	C	G	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr11	86610524	86610525	chr11:86610525:G:T	rs4944602	G	T	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr11	86610533	86610534	chr11:86610534:C:A	rs4944603	C	A	c	Sox2_MA0143.3	-16	0	-	0	0	.
chr11	86665667	86665668	chr11:86665668:G:A	rs507123	G	A	G	Sox2_MA0143.3	27	0	+	0	0	.
chr11	86672465	86672466	chr11:86672466:G:A	rs181718134	G	A	G	Sox2_MA0143.3	-14	0	+	0	0	.
chr11	86672484	86672485	chr11:86672485:G:C	rs147332784	G	C	G	Sox2_MA0143.3	5	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr11	86735440	86735441	chr11:86735441:G:A	rs2512996	G	A	A	Sox2_MA0143.3	-15	0	+	0	0	.
chr11	86750314	86750315	chr11:86750315:A:G	rs1285041222	A	G	A	Sox2_MA0143.3	-7	0	+	0	0	.
chr11	86760916	86760917	chr11:86760917:G:A	rs183716819	G	A	G	Sox2_MA0143.3	0	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr11	86868176	86868177	chr11:86868177:A:G	rs72951618	A	G	G	Sox2_MA0143.3	26	0	-	0	0	.
chr11	86872399	86872400	chr11:86872400:C:G	rs2511883	C	G	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr11	86948481	86948482	chr11:86948482:G:A	rs11234890	G	A	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr11	87030791	87030792	chr11:87030792:A:G	rs11234921	A	G	A	Sox2_MA0143.3	22	0	+	0	0	.
chr11	87036742	87036743	chr11:87036743:T:A	rs2512503	T	A	A	Sox2_MA0143.3	-16	0	+	0	0	.
chr11	87155759	87155760	chr11:87155760:G:A	rs543687	G	A	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr11	87278091	87278092	chr11:87278092:A:C	rs1011301	A	C	C	Sox2_MA0143.3	26	0	+	0	0	.
chr11	87303258	87303259	chr11:87303259:G:A	rs77252567	G	A	G	Sox2_MA0143.3	14	0	+	0	0	.
chr11	87325659	87325660	chr11:87325660:A:G	rs7936013	A	G	A	Sox2_MA0143.3	18	0	-	0	0	.
chr11	87331598	87331599	chr11:87331599:G:C	rs147136988	G	C	G	Sox2_MA0143.3	25	0	-	0	0	.
chr11	87377896	87377897	chr11:87377897:G:A	rs11606026	G	A	G	Sox2_MA0143.3	25	0	+	0	0	.
chr11	87560098	87560099	chr11:87560099:C:T	rs7931500	C	T	T	Sox2_MA0143.3	0	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr11	87719862	87719863	chr11:87719863:C:T	rs116964839	C	T	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr11	87743577	87743578	chr11:87743578:C:G	rs79094606	C	G	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr11	87861280	87861281	chr11:87861281:A:C	rs73528415	A	C	A	Sox2_MA0143.3	21	0	-	0	0	.
chr11	88043334	88043335	chr11:88043335:A:G	rs10765491	A	G	G	Sox2_MA0143.3	27	0	-	0	0	.
chr11	88155230	88155231	chr11:88155231:A:G	rs4753009	A	G	G	Sox2_MA0143.3	27	0	+	0	0	.
chr11	88345599	88345600	chr11:88345600:G:A	rs10830727	G	A	G	Sox2_MA0143.3	21	0	+	0	0	.
chr11	88347387	88347388	chr11:88347388:A:G	rs575730	A	G	G	Sox2_MA0143.3	4	1	-	9.800647049772198	2.8918922704569785	CCTTTGTT
chr11	88431932	88431933	chr11:88431933:G:A	rs533572451	G	A	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr11	88440116	88440117	chr11:88440117:A:G	rs34517536	A	G	A	Sox2_MA0143.3	-14	0	+	0	0	.
chr11	88535532	88535533	chr11:88535533:G:T	rs308896	G	T	G	Sox2_MA0143.3	14	0	+	0	0	.
chr11	88631782	88631783	chr11:88631783:G:A	rs982011	G	A	A	Sox2_MA0143.3	-7	0	+	0	0	.
chr11	88632148	88632149	chr11:88632149:C:T	rs79185820	C	T	C	Sox2_MA0143.3	20	0	+	0	0	.
chr11	88751657	88751658	chr11:88751658:G:C	rs12276517	G	C	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr11	88878514	88878515	chr11:88878515:T:C	rs72643342	T	C	T	Sox2_MA0143.3	18	0	-	0	0	.
chr11	88955661	88955662	chr11:88955662:T:C	rs538955	T	C	t	Sox2_MA0143.3	-13	0	+	0	0	.
chr11	89156456	89156457	chr11:89156457:G:A	rs76124081	G	A	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr11	89490363	89490364	chr11:89490364:A:G	rs1340192855	A	G	A	Sox2_MA0143.3	-20	0	-	0	0	.
chr11	89490884	89490885	chr11:89490885:C:T	rs56326837	C	T	C	Sox2_MA0143.3	5	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr11	89490889	89490890	chr11:89490890:G:A	rs56091966	G	A	G	Sox2_MA0143.3	0	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr11	89491549	89491550	chr11:89491550:G:T	rs2289123	G	T	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr11	89491578	89491579	chr11:89491579:T:C	rs2289122	T	C	T	Sox2_MA0143.3	25	0	+	0	0	.
chr11	89601415	89601416	chr11:89601416:T:C	rs145286391	T	C	t	Sox2_MA0143.3	-4	0	+	0	0	.
chr11	89649531	89649532	chr11:89649532:T:G	rs11018705	T	G	T	Sox2_MA0143.3	17	0	+	0	0	.
chr11	90257111	90257112	chr11:90257112:C:T	rs7358465	C	T	T	Sox2_MA0143.3	-16	0	+	0	0	.
chr11	90519975	90519976	chr11:90519976:T:A	rs4294531	T	A	T	Sox2_MA0143.3	21	0	-	0	0	.
chr11	90596186	90596187	chr11:90596187:C:T	rs597832	C	T	T	Sox2_MA0143.3	12	0	+	0	0	.
chr11	90704723	90704724	chr11:90704724:C:T	rs141196486	C	T	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr11	90745214	90745215	chr11:90745215:A:C	rs7126992	A	C	C	Sox2_MA0143.3	15	0	+	0	0	.
chr11	90758307	90758308	chr11:90758308:C:T	rs10741368	C	T	C	Sox2_MA0143.3	17	0	+	0	0	.
chr11	91134658	91134659	chr11:91134659:G:C	rs11019293	G	C	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr11	91164682	91164683	chr11:91164683:G:A	rs7113267	G	A	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr11	91307814	91307815	chr11:91307815:T:G	rs11019386	T	G	T	Sox2_MA0143.3	-14	0	-	0	0	.
chr11	91418799	91418800	chr11:91418800:G:C	rs582978	G	C	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr11	91433841	91433842	chr11:91433842:C:T	rs75603842	C	T	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr11	91658466	91658467	chr11:91658467:T:C	rs77378275	T	C	T	Sox2_MA0143.3	23	0	+	0	0	.
chr11	91688280	91688281	chr11:91688281:C:G	rs12281404	C	G	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr11	91693593	91693594	chr11:91693594:T:A	rs12417322	T	A	T	Sox2_MA0143.3	7	1	-	3.5547341015215945	9.800647049772198	CCTTTGTA
chr11	91765651	91765652	chr11:91765652:C:T	rs3847516	C	T	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr11	91870881	91870882	chr11:91870882:G:A	rs10830779	G	A	A	Sox2_MA0143.3	15	0	-	0	0	.
chr11	91922165	91922166	chr11:91922166:A:G	rs11019690	A	G	A	Sox2_MA0143.3	-17	0	-	0	0	.
chr11	92035857	92035858	chr11:92035858:G:A	rs74366081	G	A	G	Sox2_MA0143.3	20	0	+	0	0	.
chr11	92046787	92046788	chr11:92046788:T:C	rs11019751	T	C	T	Sox2_MA0143.3	26	0	+	0	0	.
chr11	92125661	92125662	chr11:92125662:T:C	rs7110209	T	C	T	Sox2_MA0143.3	18	0	-	0	0	.
chr11	92190779	92190780	chr11:92190780:A:C	rs11019856	A	C	A	Sox2_MA0143.3	-20	0	-	0	0	.
chr11	92307329	92307330	chr11:92307330:G:C	rs192155727	G	C	G	Sox2_MA0143.3	-5	0	+	0	0	.
chr11	92336166	92336167	chr11:92336167:A:G	rs67996104	A	G	A	Sox2_MA0143.3	19	0	-	0	0	.
chr11	92583705	92583706	chr11:92583706:C:T	rs7951136	C	T	C	Sox2_MA0143.3	0	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr11	92703058	92703059	chr11:92703059:T:C	rs2852397	T	C	T	Sox2_MA0143.3	-19	0	+	0	0	.
chr11	92738457	92738458	chr11:92738458:G:T	rs2852401	G	T	G	Sox2_MA0143.3	20	0	+	0	0	.
chr11	92754328	92754329	chr11:92754329:A:G	rs12270559	A	G	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr11	92766805	92766806	chr11:92766806:T:C	rs10466349	T	C	T	Sox2_MA0143.3	14	0	-	0	0	.
chr11	92803386	92803387	chr11:92803387:A:G	rs3912649	A	G	G	Sox2_MA0143.3	11	0	-	0	0	.
chr11	92891068	92891069	chr11:92891069:C:T	rs187159256	C	T	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr11	92902522	92902523	chr11:92902523:C:T	rs16918252	C	T	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr11	92949853	92949854	chr11:92949854:C:T	rs891209882	C	T	C	Sox2_MA0143.3	26	0	-	0	0	.
chr11	93000671	93000672	chr11:93000672:A:G	chr11:93000672:A:G	A	G	A	Sox2_MA0143.3	-15	0	+	0	0	.
chr11	93229036	93229037	chr11:93229037:T:C	rs547517430	T	C	T	Sox2_MA0143.3	10	0	+	0	0	.
chr11	93250692	93250693	chr11:93250693:A:G	rs7482501	A	G	a	Sox2_MA0143.3	25	0	-	0	0	.
chr11	93478597	93478598	chr11:93478598:A:G	rs7365	A	G	G	Sox2_MA0143.3	18	0	-	0	0	.
chr11	93498309	93498310	chr11:93498310:T:G	rs2658765	T	G	T	Sox2_MA0143.3	17	0	-	0	0	.
chr11	93559788	93559789	chr11:93559789:C:T	rs12791296	C	T	C	Sox2_MA0143.3	13	0	-	0	0	.
chr11	93741965	93741966	chr11:93741966:C:T	rs531188220	C	T	C	Sox2_MA0143.3	26	0	+	0	0	.
chr11	93784344	93784345	chr11:93784345:C:T	rs117654845	C	T	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr11	93848531	93848532	chr11:93848532:G:A	rs1553603	G	A	G	Sox2_MA0143.3	17	0	+	0	0	.
chr11	93922207	93922208	chr11:93922208:T:C	rs80278957	T	C	T	Sox2_MA0143.3	6	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr11	93939919	93939920	chr11:93939920:A:C	rs7940719	A	C	A	Sox2_MA0143.3	-16	0	-	0	0	.
chr11	94017413	94017414	chr11:94017414:G:T	rs2949869	G	T	G	Sox2_MA0143.3	0	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr11	94090068	94090069	chr11:94090069:C:G	rs4753124	C	G	C	Sox2_MA0143.3	21	0	+	0	0	.
chr11	94128736	94128737	chr11:94128737:A:G	chr11:94128737:A:G	A	G	A	Sox2_MA0143.3	-12	0	+	0	0	.
chr11	94129182	94129183	chr11:94129183:C:A	rs146477497	C	A	C	Sox2_MA0143.3	-5	0	-	0	0	.
chr11	94132594	94132595	chr11:94132595:G:C	rs72968800	G	C	G	Sox2_MA0143.3	22	0	+	0	0	.
chr11	94132595	94132596	chr11:94132596:G:A	rs11020655	G	A	G	Sox2_MA0143.3	23	0	+	0	0	.
chr11	94171942	94171943	chr11:94171943:C:T	rs72972518	C	T	C	Sox2_MA0143.3	8	0	+	0	0	.
chr11	94171956	94171957	chr11:94171957:G:A	rs4611169	G	A	A	Sox2_MA0143.3	22	0	+	0	0	.
chr11	94185931	94185932	chr11:94185932:A:G	rs67946813	A	G	A	Sox2_MA0143.3	10	0	+	0	0	.
chr11	94193489	94193490	chr11:94193490:C:T	rs1541301	C	T	T	Sox2_MA0143.3	0	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr11	94194961	94194962	chr11:94194962:G:C	rs1792633	G	C	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr11	94433273	94433274	chr11:94433274:T:C	rs584707	T	C	T	Sox2_MA0143.3	10	0	+	0	0	.
chr11	94669071	94669072	chr11:94669072:C:A	rs75641348	C	A	C	Sox2_MA0143.3	0	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr11	94768130	94768131	chr11:94768131:T:G	rs184472008	T	G	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr11	94768137	94768138	chr11:94768138:G:A	rs547212902	G	A	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr11	94768961	94768962	chr11:94768962:C:G	rs189614158	C	G	C	Sox2_MA0143.3	17	0	-	0	0	.
chr11	94770552	94770553	chr11:94770553:T:C	rs965204	T	C	T	Sox2_MA0143.3	12	0	+	0	0	.
chr11	94802691	94802692	chr11:94802692:T:C	rs3858371	T	C	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr11	94880984	94880985	chr11:94880985:T:C	rs690270	T	C	T	Sox2_MA0143.3	-2	0	+	0	0	.
chr11	94885410	94885411	chr11:94885411:T:C	rs539468	T	C	T	Sox2_MA0143.3	21	0	-	0	0	.
chr11	94885722	94885723	chr11:94885723:C:G	rs542849	C	G	C	Sox2_MA0143.3	5	1	-	8.676919043985553	1.7681642646703324	CCATTGTG
chr11	94886419	94886420	chr11:94886420:A:C	rs2510996	A	C	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr11	95073557	95073558	chr11:95073558:C:T	rs4753652	C	T	C	Sox2_MA0143.3	11	0	+	0	0	.
chr11	95076274	95076275	chr11:95076275:C:T	rs114898618	C	T	C	Sox2_MA0143.3	17	0	+	0	0	.
chr11	95082876	95082877	chr11:95082877:C:A	rs61893670	C	A	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr11	95112610	95112611	chr11:95112611:C:G	rs609236	C	G	C	Sox2_MA0143.3	0	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr11	95123684	95123685	chr11:95123685:C:T	rs72979774	C	T	c	Sox2_MA0143.3	21	0	-	0	0	.
chr11	95267688	95267689	chr11:95267689:G:A	rs7926661	G	A	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr11	95338827	95338828	chr11:95338828:C:T	chr11:95338828:C:T	C	T	C	Sox2_MA0143.3	20	0	-	0	0	.
chr11	95370124	95370125	chr11:95370125:A:T	rs3858382	A	T	A	Sox2_MA0143.3	-9	0	+	0	0	.
chr11	95370148	95370149	chr11:95370149:T:C	rs490509	T	C	C	Sox2_MA0143.3	15	0	+	0	0	.
chr11	95378950	95378951	chr11:95378951:G:A	rs56873637	G	A	G	Sox2_MA0143.3	22	0	-	0	0	.
chr11	95454033	95454034	chr11:95454034:C:T	rs113793344	C	T	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr11	95456041	95456042	chr11:95456042:G:T	rs528798	G	T	T	Sox2_MA0143.3	21	0	+	0	0	.
chr11	95764006	95764007	chr11:95764007:C:T	rs1727149	C	T	C	Sox2_MA0143.3	15	0	-	0	0	.
chr11	95789883	95789884	chr11:95789884:G:A	rs1043244970	G	A	G	Sox2_MA0143.3	10	0	-	0	0	.
chr11	95937256	95937257	chr11:95937257:T:C	rs12295617	T	C	T	Sox2_MA0143.3	-5	0	-	0	0	.
chr11	95968808	95968809	chr11:95968809:G:T	rs926438785	G	T	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr11	95991398	95991399	chr11:95991399:T:C	rs623543	T	C	T	Sox2_MA0143.3	-13	0	+	0	0	.
chr11	96013622	96013623	chr11:96013623:G:A	rs11021389	G	A	G	Sox2_MA0143.3	9	0	-	0	0	.
chr11	96105535	96105536	chr11:96105536:G:A	rs79672147	G	A	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr11	96151667	96151668	chr11:96151668:C:T	rs150645659	C	T	T	Sox2_MA0143.3	0	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr11	96192870	96192871	chr11:96192871:G:A	rs6483488	G	A	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr11	96216917	96216918	chr11:96216918:G:A	rs16923340	G	A	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr11	96228771	96228772	chr11:96228772:T:C	rs182811811	T	C	T	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr11	96254296	96254297	chr11:96254297:C:T	rs997992549	C	T	C	Sox2_MA0143.3	14	0	+	0	0	.
chr11	96266698	96266699	chr11:96266699:T:A	rs11021508	T	A	A	Sox2_MA0143.3	-11	0	-	0	0	.
chr11	96306427	96306428	chr11:96306428:A:T	rs115646211	A	T	T	Sox2_MA0143.3	-10	0	+	0	0	.
chr11	96606889	96606890	chr11:96606890:C:T	rs3019714	C	T	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr11	96762901	96762902	chr11:96762902:C:A	rs76966730	C	A	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr11	96846464	96846465	chr11:96846465:C:A	rs78522700	C	A	C	Sox2_MA0143.3	5	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr11	96907369	96907370	chr11:96907370:T:C	rs2198343	T	C	T	Sox2_MA0143.3	17	0	-	0	0	.
chr11	96944204	96944205	chr11:96944205:T:G	rs79933114	T	G	t	Sox2_MA0143.3	-5	0	-	0	0	.
chr11	96969443	96969444	chr11:96969444:G:A	rs537526	G	A	A	Sox2_MA0143.3	14	0	-	0	0	.
chr11	97202092	97202093	chr11:97202093:T:C	rs1586998	T	C	C	Sox2_MA0143.3	2	1	-	9.019595766176417	2.900948058900136	CCATTGTC
chr11	97461313	97461314	chr11:97461314:G:A	rs189115540	G	A	T	Sox2_MA0143.3	-16	0	+	0	0	.
chr11	97461349	97461350	chr11:97461350:G:C	rs181562206	G	C	G	Sox2_MA0143.3	20	0	+	0	0	.
chr11	97740873	97740874	chr11:97740874:T:C	rs77839304	T	C	T	Sox2_MA0143.3	-18	0	-	0	0	.
chr11	97743632	97743633	chr11:97743633:C:T	rs935386883	C	T	C	Sox2_MA0143.3	0	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr11	97995084	97995085	chr11:97995085:A:C	rs72983367	A	C	A	Sox2_MA0143.3	14	0	-	0	0	.
chr11	98057221	98057222	chr11:98057222:G:A	rs476271	G	A	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr11	98361871	98361872	chr11:98361872:C:A	rs72980619	C	A	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr11	98365412	98365413	chr11:98365413:G:A	rs149256061	G	A	G	Sox2_MA0143.3	-9	0	+	0	0	.
chr11	98672339	98672340	chr11:98672340:C:A	rs1594359	C	A	A	Sox2_MA0143.3	7	1	-	8.864090315184848	9.800647049772198	CCTTTGTG
chr11	98710290	98710291	chr11:98710291:A:G	rs2512856	A	G	A	Sox2_MA0143.3	-3	0	+	0	0	.
chr11	98711253	98711254	chr11:98711254:T:C	rs140219866	T	C	T	Sox2_MA0143.3	10	0	-	0	0	.
chr11	98740644	98740645	chr11:98740645:T:C	rs79811464	T	C	T	Sox2_MA0143.3	-19	0	+	0	0	.
chr11	99160624	99160625	chr11:99160625:T:G	rs11218585	T	G	t	Sox2_MA0143.3	-18	0	-	0	0	.
chr11	99326234	99326235	chr11:99326235:A:G	rs72983722	A	G	A	Sox2_MA0143.3	20	0	+	0	0	.
chr11	99475301	99475302	chr11:99475302:C:T	rs76025329	C	T	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr11	99538481	99538482	chr11:99538482:T:C	rs10790788	T	C	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr11	99594436	99594437	chr11:99594437:G:A	rs10501917	G	A	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr11	99676623	99676624	chr11:99676624:C:T	rs626566	C	T	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr11	99694370	99694371	chr11:99694371:T:A	rs12419474	T	A	N	Sox2_MA0143.3	18	0	-	0	0	.
chr11	99694404	99694405	chr11:99694405:T:C	rs34110385	T	C	t	Sox2_MA0143.3	-16	0	-	0	0	.
chr11	99742455	99742456	chr11:99742456:T:A	rs1398166	T	A	A	Sox2_MA0143.3	14	0	+	0	0	.
chr11	100094134	100094135	chr11:100094135:A:G	rs1004223	A	G	a	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr11	100106111	100106112	chr11:100106112:C:A	rs61908115	C	A	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr11	100338656	100338657	chr11:100338657:G:T	rs567947387	G	T	G	Sox2_MA0143.3	13	0	+	0	0	.
chr11	100470269	100470270	chr11:100470270:C:T	rs116305054	C	T	C	Sox2_MA0143.3	7	1	+	9.019595766176417	9.613475778572903	CCATTGTC
chr11	100510794	100510795	chr11:100510795:T:C	rs10791417	T	C	T	Sox2_MA0143.3	6	1	+	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr11	100525147	100525148	chr11:100525148:A:G	rs76197546	A	G	A	Sox2_MA0143.3	18	0	-	0	0	.
chr11	100637303	100637304	chr11:100637304:A:C	rs4753978	A	C	A	Sox2_MA0143.3	-14	0	-	0	0	.
chr11	100718256	100718257	chr11:100718257:A:G	rs61910475	A	G	A	Sox2_MA0143.3	-19	0	+	0	0	.
chr11	100810479	100810480	chr11:100810480:G:A	rs618291	G	A	a	Sox2_MA0143.3	-6	0	+	0	0	.
chr11	100831553	100831554	chr11:100831554:G:A	chr11:100831554:G:A	G	A	G	Sox2_MA0143.3	-2	0	+	0	0	.
chr11	100909122	100909123	chr11:100909123:T:C	rs78022050	T	C	T	Sox2_MA0143.3	-11	0	+	0	0	.
chr11	101195521	101195522	chr11:101195522:C:T	rs17737180	C	T	T	Sox2_MA0143.3	-13	0	+	0	0	.
chr11	101436730	101436731	chr11:101436731:T:G	rs78275501	T	G	T	Sox2_MA0143.3	-15	0	-	0	0	.
chr11	101521107	101521108	chr11:101521108:C:T	rs10895129	C	T	T	Sox2_MA0143.3	14	0	-	0	0	.
chr11	101558755	101558756	chr11:101558756:A:G	rs1216142270	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr11	101791219	101791220	chr11:101791220:A:G	rs10895198	A	G	a	Sox2_MA0143.3	-11	0	-	0	0	.
chr11	101909395	101909396	chr11:101909396:A:G	rs57783593	A	G	A	Sox2_MA0143.3	-15	0	+	0	0	.
chr11	102109846	102109847	chr11:102109847:T:C	rs3752685	T	C	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr11	102114570	102114571	chr11:102114571:C:T	rs3824930	C	T	C	Sox2_MA0143.3	1	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr11	102120653	102120654	chr11:102120654:C:G	rs10895258	C	G	G	Sox2_MA0143.3	13	0	+	0	0	.
chr11	102120656	102120657	chr11:102120657:A:G	rs111318939	A	G	A	Sox2_MA0143.3	16	0	+	0	0	.
chr11	102186738	102186739	chr11:102186739:A:G	rs58634008	A	G	A	Sox2_MA0143.3	6	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr11	102260502	102260503	chr11:102260503:A:G	rs2604529	A	G	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr11	102439176	102439177	chr11:102439177:T:A	rs113500535	T	A	T	Sox2_MA0143.3	9	0	-	0	0	.
chr11	102452645	102452646	chr11:102452646:A:G	rs10895296	A	G	G	Sox2_MA0143.3	26	0	+	0	0	.
chr11	102593217	102593218	chr11:102593218:C:T	rs750263592	C	T	C	Sox2_MA0143.3	14	0	-	0	0	.
chr11	102593218	102593219	chr11:102593219:A:G	rs1784441	A	G	A	Sox2_MA0143.3	13	0	-	0	0	.
chr11	102613266	102613267	chr11:102613267:G:A	rs1711412	G	A	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr11	102628608	102628609	chr11:102628609:A:G	rs2701967	A	G	A	Sox2_MA0143.3	-8	0	+	0	0	.
chr11	102632605	102632606	chr11:102632606:C:T	rs10895327	C	T	T	Sox2_MA0143.3	-14	0	-	0	0	.
chr11	102728322	102728323	chr11:102728323:T:C	rs10895354	T	C	T	Sox2_MA0143.3	-19	0	+	0	0	.
chr11	102733831	102733832	chr11:102733832:C:T	rs71478596	C	T	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr11	102798677	102798678	chr11:102798678:T:C	rs1144393	T	C	T	Sox2_MA0143.3	19	0	+	0	0	.
chr11	102802682	102802683	chr11:102802683:C:G	rs11225427	C	G	C	Sox2_MA0143.3	27	0	+	0	0	.
chr11	102806397	102806398	chr11:102806398:T:C	rs145541733	T	C	T	Sox2_MA0143.3	-3	0	-	0	0	.
chr11	103420492	103420493	chr11:103420493:T:C	rs683615	T	C	C	Sox2_MA0143.3	8	0	-	0	0	.
chr11	103432553	103432554	chr11:103432554:C:T	rs505677	C	T	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr11	103432557	103432558	chr11:103432558:C:T	rs505672	C	T	C	Sox2_MA0143.3	0	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr11	103432906	103432907	chr11:103432907:G:A	rs603400	G	A	A	Sox2_MA0143.3	-11	0	+	0	0	.
chr11	103450480	103450481	chr11:103450481:A:C	rs77850207	A	C	A	Sox2_MA0143.3	24	0	-	0	0	.
chr11	103512555	103512556	chr11:103512556:G:A	rs11225850	G	A	G	Sox2_MA0143.3	-5	0	+	0	0	.
chr11	103585678	103585679	chr11:103585679:G:C	rs2167342	G	C	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr11	103588377	103588378	chr11:103588378:A:G	rs7941218	A	G	A	Sox2_MA0143.3	-14	0	-	0	0	.
chr11	103594552	103594553	chr11:103594553:G:A	rs11606445	G	A	A	Sox2_MA0143.3	20	0	-	0	0	.
chr11	103602945	103602946	chr11:103602946:C:G	rs58315908	C	G	C	Sox2_MA0143.3	25	0	+	0	0	.
chr11	103603046	103603047	chr11:103603047:T:G	rs7926078	T	G	T	Sox2_MA0143.3	2	1	-	8.676919043985553	2.5582713367092715	CCATTGTG
chr11	103644757	103644758	chr11:103644758:C:T	rs59797443	C	T	C	Sox2_MA0143.3	24	0	-	0	0	.
chr11	103666304	103666305	chr11:103666305:T:C	rs4298874	T	C	T	Sox2_MA0143.3	-19	0	+	0	0	.
chr11	103730387	103730388	chr11:103730388:G:C	rs12289602	G	C	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr11	103870581	103870582	chr11:103870582:G:A	rs477649	G	A	G	Sox2_MA0143.3	26	0	-	0	0	.
chr11	103908296	103908297	chr11:103908297:A:G	rs11226057	A	G	G	Sox2_MA0143.3	4	1	-	8.864090315184848	1.9553355358696274	CCTTTGTG
chr11	104034056	104034057	chr11:104034057:C:T	rs7113370	C	T	C	Sox2_MA0143.3	14	0	+	0	0	.
chr11	104183838	104183839	chr11:104183839:T:C	rs77705443	T	C	C	Sox2_MA0143.3	26	0	-	0	0	.
chr11	104190250	104190251	chr11:104190251:T:C	rs11226217	T	C	T	Sox2_MA0143.3	2	1	-	9.613475778572903	3.494828071296623	CCATTGTT
chr11	104249906	104249907	chr11:104249907:C:T	rs11226250	C	T	T	Sox2_MA0143.3	-12	0	-	0	0	.
chr11	104259560	104259561	chr11:104259561:C:T	rs4755016	C	T	T	Sox2_MA0143.3	13	0	+	0	0	.
chr11	104276273	104276274	chr11:104276274:A:T	rs35226858	A	T	A	Sox2_MA0143.3	-4	0	+	0	0	.
chr11	104332343	104332344	chr11:104332344:C:T	rs7952460	C	T	N	Sox2_MA0143.3	11	0	+	0	0	.
chr11	104378651	104378652	chr11:104378652:A:C	rs11607975	A	C	A	Sox2_MA0143.3	-9	0	-	0	0	.
chr11	104449097	104449098	chr11:104449098:A:C	rs35273172	A	C	A	Sox2_MA0143.3	-8	0	-	0	0	.
chr11	104610095	104610096	chr11:104610096:G:C	rs10895711	G	C	C	Sox2_MA0143.3	0	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr11	104918778	104918779	chr11:104918779:C:T	rs632806	C	T	c	Sox2_MA0143.3	-1	0	-	0	0	.
chr11	104965784	104965785	chr11:104965785:A:G	rs55721600	A	G	g	Sox2_MA0143.3	-12	0	+	0	0	.
chr11	105155794	105155795	chr11:105155795:G:T	rs17378343	G	T	G	Sox2_MA0143.3	11	0	+	0	0	.
chr11	105156480	105156481	chr11:105156481:A:G	rs530682353	A	G	A	Sox2_MA0143.3	8	0	+	0	0	.
chr11	105162822	105162823	chr11:105162823:T:C	rs12804035	T	C	T	Sox2_MA0143.3	-10	0	+	0	0	.
chr11	105168771	105168772	chr11:105168772:A:C	chr11:105168772:A:C	A	C	A	Sox2_MA0143.3	23	0	-	0	0	.
chr11	105177746	105177747	chr11:105177747:A:G	rs72990669	A	G	a	Sox2_MA0143.3	-1	0	+	0	0	.
chr11	105368863	105368864	chr11:105368864:C:T	rs17093789	C	T	C	Sox2_MA0143.3	26	0	-	0	0	.
chr11	105553119	105553120	chr11:105553120:C:T	rs12806006	C	T	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr11	105557386	105557387	chr11:105557387:A:G	rs533555179	A	G	A	Sox2_MA0143.3	4	1	-	3.5547341015215945	-3.3540206777936254	CCTTTGTA
chr11	105693132	105693133	chr11:105693133:A:G	rs10895860	A	G	A	Sox2_MA0143.3	6	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr11	105936489	105936490	chr11:105936490:C:G	rs17391232	C	G	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr11	106190544	106190545	chr11:106190545:C:A	chr11:106190545:C:A	C	A	C	Sox2_MA0143.3	8	0	+	0	0	.
chr11	106190555	106190556	chr11:106190556:C:T	rs4755137	C	T	C	Sox2_MA0143.3	19	0	+	0	0	.
chr11	106305561	106305562	chr11:106305562:T:C	rs10791801	T	C	T	Sox2_MA0143.3	15	0	+	0	0	.
chr11	106498088	106498089	chr11:106498089:C:T	rs75282992	C	T	-	Sox2_MA0143.3	21	0	+	0	0	.
chr11	106577900	106577901	chr11:106577901:A:T	rs4582939	A	T	T	Sox2_MA0143.3	22	0	+	0	0	.
chr11	106708477	106708478	chr11:106708478:C:A	rs12420232	C	A	A	Sox2_MA0143.3	-2	0	-	0	0	.
chr11	106815821	106815822	chr11:106815822:T:C	rs61905201	T	C	T	Sox2_MA0143.3	-7	0	-	0	0	.
chr11	106926738	106926739	chr11:106926739:A:C	rs113813279	A	C	A	Sox2_MA0143.3	14	0	-	0	0	.
chr11	106959897	106959898	chr11:106959898:G:A	rs7109634	G	A	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr11	106961216	106961217	chr11:106961217:T:G	rs11211988	T	G	T	Sox2_MA0143.3	13	0	-	0	0	.
chr11	106961222	106961223	chr11:106961223:A:G	rs143739264	A	G	A	Sox2_MA0143.3	7	1	-	9.800647049772198	9.206767037375712	CCTTTGTT
chr11	106961243	106961244	chr11:106961244:A:C	rs7936117	A	C	A	Sox2_MA0143.3	-14	0	-	0	0	.
chr11	106984160	106984161	chr11:106984161:A:G	rs2510598	A	G	G	Sox2_MA0143.3	17	0	+	0	0	.
chr11	106984162	106984163	chr11:106984163:G:A	rs2510599	G	A	G	Sox2_MA0143.3	19	0	+	0	0	.
chr11	107021002	107021003	chr11:107021003:G:A	rs12271377	G	A	A	Sox2_MA0143.3	23	0	+	0	0	.
chr11	107027296	107027297	chr11:107027297:A:G	rs10789558	A	G	A	Sox2_MA0143.3	12	0	+	0	0	.
chr11	107040897	107040898	chr11:107040898:G:A	rs12806895	G	A	G	Sox2_MA0143.3	10	0	+	0	0	.
chr11	107040898	107040899	chr11:107040899:C:T	rs12806566	C	T	C	Sox2_MA0143.3	11	0	+	0	0	.
chr11	107244248	107244249	chr11:107244249:G:A	rs6588953	G	A	G	Sox2_MA0143.3	9	0	+	0	0	.
chr11	107258182	107258183	chr11:107258183:G:A	rs10789588	G	A	A	Sox2_MA0143.3	1	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr11	107688531	107688532	chr11:107688532:T:A	rs12363338	T	A	T	Sox2_MA0143.3	-7	0	+	0	0	.
chr11	107753165	107753166	chr11:107753166:C:A	rs117753850	C	A	C	Sox2_MA0143.3	1	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr11	107819587	107819588	chr11:107819588:G:A	rs73001557	G	A	G	Sox2_MA0143.3	7	1	-	9.206767037375712	9.800647049772198	CCTTTGTC
chr11	107927347	107927348	chr11:107927348:A:G	rs77104915	A	G	A	Sox2_MA0143.3	6	1	-	9.613475778572903	2.7047209992576837	CCATTGTT
chr11	108069314	108069315	chr11:108069315:A:G	rs4575229	A	G	A	Sox2_MA0143.3	23	0	+	0	0	.
chr11	108467422	108467423	chr11:108467423:G:A	rs147662303	G	A	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr11	108559896	108559897	chr11:108559897:T:G	rs2256083	T	G	T	Sox2_MA0143.3	-8	0	+	0	0	.
chr11	108603085	108603086	chr11:108603086:G:C	rs11212732	G	C	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr11	108966487	108966488	chr11:108966488:G:A	rs2016290	G	A	G	Sox2_MA0143.3	11	0	+	0	0	.
chr11	109043568	109043569	chr11:109043569:G:A	rs78703279	G	A	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr11	109114777	109114778	chr11:109114778:T:C	rs17633211	T	C	T	Sox2_MA0143.3	4	1	+	3.5547341015215945	-3.3540206777936254	CCTTTGTA
chr11	109197621	109197622	chr11:109197622:A:C	rs113925927	A	C	A	Sox2_MA0143.3	-16	0	+	0	0	.
chr11	109501247	109501248	chr11:109501248:A:C	rs141233642	A	C	A	Sox2_MA0143.3	-17	0	-	0	0	.
chr11	109511965	109511966	chr11:109511966:G:T	rs1371330	G	T	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr11	109618848	109618849	chr11:109618849:G:A	rs11213128	G	A	G	Sox2_MA0143.3	25	0	-	0	0	.
chr11	109745813	109745814	chr11:109745814:T:C	rs2002733	T	C	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr11	109751427	109751428	chr11:109751428:T:C	rs2099378	T	C	C	Sox2_MA0143.3	14	0	+	0	0	.
chr11	109993845	109993846	chr11:109993846:A:G	chr11:109993846:A:G	A	G	A	Sox2_MA0143.3	26	0	-	0	0	.
chr11	110069158	110069159	chr11:110069159:A:G	rs61901856	A	G	A	Sox2_MA0143.3	17	0	-	0	0	.
chr11	110075791	110075792	chr11:110075792:G:A	rs7117355	G	A	A	Sox2_MA0143.3	24	0	-	0	0	.
chr11	110308321	110308322	chr11:110308322:G:A	rs78744083	G	A	G	Sox2_MA0143.3	13	0	+	0	0	.
chr11	110460522	110460523	chr11:110460523:C:T	rs12221694	C	T	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr11	110506977	110506978	chr11:110506978:C:T	rs328288	C	T	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr11	110565570	110565571	chr11:110565571:C:T	rs56189858	C	T	C	Sox2_MA0143.3	1	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr11	110606487	110606488	chr11:110606488:C:A	rs326938	C	A	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr11	110735718	110735719	chr11:110735719:T:C	rs11213570	T	C	C	Sox2_MA0143.3	22	0	+	0	0	.
chr11	110795397	110795398	chr11:110795398:C:G	rs78982603	C	G	C	Sox2_MA0143.3	21	0	-	0	0	.
chr11	110883663	110883664	chr11:110883664:T:C	rs73020008	T	C	T	Sox2_MA0143.3	2	1	-	8.676919043985553	2.5582713367092715	CCATTGTG
chr11	111082439	111082440	chr11:111082440:T:C	rs60425346	T	C	T	Sox2_MA0143.3	-3	0	-	0	0	.
chr11	111129588	111129589	chr11:111129589:C:A	rs12278151	C	A	C	Sox2_MA0143.3	-12	0	-	0	0	.
chr11	111344422	111344423	chr11:111344423:T:C	rs11213842	T	C	T	Sox2_MA0143.3	16	0	-	0	0	.
chr11	111391269	111391270	chr11:111391270:A:G	rs1944918	A	G	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr11	111422673	111422674	chr11:111422674:G:A	rs10891264	G	A	G	Sox2_MA0143.3	16	0	+	0	0	.
chr11	111423401	111423402	chr11:111423402:T:A	rs4393359	T	A	A	Sox2_MA0143.3	23	0	+	0	0	.
chr11	111532487	111532488	chr11:111532488:G:A	rs976456893	G	A	G	Sox2_MA0143.3	23	0	-	0	0	.
chr11	111612217	111612218	chr11:111612218:G:T	rs754321495	G	T	G	Sox2_MA0143.3	14	0	+	0	0	.
chr11	111738449	111738450	chr11:111738450:G:A	rs647080	G	A	G	Sox2_MA0143.3	1	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr11	111778138	111778139	chr11:111778139:A:C	rs618031	A	C	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr11	111815545	111815546	chr11:111815546:C:G	rs899148449	C	G	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr11	111819606	111819607	chr11:111819607:A:G	rs1633471	A	G	G	Sox2_MA0143.3	20	0	-	0	0	.
chr11	111937407	111937408	chr11:111937408:G:A	rs57018568	G	A	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr11	111980217	111980218	chr11:111980218:A:T	rs185981704	A	T	A	Sox2_MA0143.3	-12	0	+	0	0	.
chr11	112265854	112265855	chr11:112265855:T:C	rs891360	T	C	T	Sox2_MA0143.3	2	1	-	8.676919043985553	2.5582713367092715	CCATTGTG
chr11	112271188	112271189	chr11:112271189:C:A	rs2564878	C	A	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr11	112349658	112349659	chr11:112349659:T:C	rs10891349	T	C	T	Sox2_MA0143.3	-8	0	+	0	0	.
chr11	112423729	112423730	chr11:112423730:T:C	rs1404797	T	C	T	Sox2_MA0143.3	10	0	+	0	0	.
chr11	112475712	112475713	chr11:112475713:G:A	rs7934741	G	A	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr11	112477960	112477961	chr11:112477961:T:C	rs4937429	T	C	T	Sox2_MA0143.3	-4	0	-	0	0	.
chr11	112514201	112514202	chr11:112514202:G:C	rs151092220	G	C	G	Sox2_MA0143.3	25	0	-	0	0	.
chr11	112525624	112525625	chr11:112525625:G:T	rs147878736	G	T	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr11	112525639	112525640	chr11:112525640:A:C	rs1445464780	A	C	A	Sox2_MA0143.3	2	1	+	9.019595766176417	2.900948058900136	CCATTGTC
chr11	112545533	112545534	chr11:112545534:A:G	chr11:112545534:A:G	A	G	A	Sox2_MA0143.3	26	0	+	0	0	.
chr11	112671319	112671320	chr11:112671320:T:C	rs185143402	T	C	T	Sox2_MA0143.3	25	0	-	0	0	.
chr11	112814930	112814931	chr11:112814931:A:G	rs684590	A	G	A	Sox2_MA0143.3	16	0	-	0	0	.
chr11	112852257	112852258	chr11:112852258:T:C	rs901783876	T	C	T	Sox2_MA0143.3	15	0	-	0	0	.
chr11	112852291	112852292	chr11:112852292:C:T	rs116991279	C	T	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr11	112878471	112878472	chr11:112878472:C:T	rs190030739	C	T	C	Sox2_MA0143.3	19	0	-	0	0	.
chr11	112926935	112926936	chr11:112926936:A:G	rs10891473	A	G	a	Sox2_MA0143.3	-10	0	+	0	0	.
chr11	112956618	112956619	chr11:112956619:G:C	rs528820405	G	C	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr11	113042224	113042225	chr11:113042225:C:T	rs2155645	C	T	C	Sox2_MA0143.3	12	0	+	0	0	.
chr11	113132385	113132386	chr11:113132386:C:T	rs17114942	C	T	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr11	113174005	113174006	chr11:113174006:T:G	rs11214529	T	G	T	Sox2_MA0143.3	4	1	+	9.206767037375712	2.2980122580604916	CCTTTGTC
chr11	113247480	113247481	chr11:113247481:T:A	rs573005493	T	A	T	Sox2_MA0143.3	18	0	+	0	0	.
chr11	113283957	113283958	chr11:113283958:C:G	rs71475102	C	G	C	Sox2_MA0143.3	5	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr11	113289047	113289048	chr11:113289048:G:T	rs10891529	G	T	G	Sox2_MA0143.3	5	1	+	8.676919043985553	1.7681642646703324	CCATTGTG
chr11	113341830	113341831	chr11:113341831:T:C	rs6589372	T	C	T	Sox2_MA0143.3	10	0	+	0	0	.
chr11	113371154	113371155	chr11:113371155:C:T	rs1078	C	T	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr11	113387342	113387343	chr11:113387343:T:C	rs10891545	T	C	T	Sox2_MA0143.3	-6	0	-	0	0	.
chr11	113407760	113407761	chr11:113407761:G:C	rs2234689	G	C	C	Sox2_MA0143.3	5	1	+	9.613475778572903	2.7047209992576837	CCATTGTT
chr11	113503290	113503291	chr11:113503291:G:A	rs10891564	G	A	G	Sox2_MA0143.3	23	0	-	0	0	.
chr11	113565349	113565350	chr11:113565350:A:G	rs7125588	A	G	A	Sox2_MA0143.3	-12	0	+	0	0	.
chr11	113588905	113588906	chr11:113588906:C:T	rs10891573	C	T	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr11	113628838	113628839	chr11:113628839:A:G	rs2076782	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr11	113628860	113628861	chr11:113628861:A:G	rs4502018	A	G	a	Sox2_MA0143.3	-19	0	-	0	0	.
chr11	113635358	113635359	chr11:113635359:G:A	rs1509514	G	A	G	Sox2_MA0143.3	27	0	-	0	0	.
chr11	113683411	113683412	chr11:113683412:C:G	rs7946187	C	G	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr11	113728927	113728928	chr11:113728928:G:A	rs183410163	G	A	G	Sox2_MA0143.3	18	0	-	0	0	.
chr11	113862388	113862389	chr11:113862389:G:T	rs2051675	G	T	G	Sox2_MA0143.3	11	0	-	0	0	.
chr11	113877699	113877700	chr11:113877700:C:G	rs77981412	C	G	C	Sox2_MA0143.3	0	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr11	114061737	114061738	chr11:114061738:A:G	rs2509220	A	G	A	Sox2_MA0143.3	-18	0	+	0	0	.
chr11	114076063	114076064	chr11:114076064:C:T	rs76643243	C	T	C	Sox2_MA0143.3	26	0	-	0	0	.
chr11	114140942	114140943	chr11:114140943:G:A	rs10891630	G	A	A	Sox2_MA0143.3	-14	0	+	0	0	.
chr11	114148217	114148218	chr11:114148218:A:G	rs11214878	A	G	A	Sox2_MA0143.3	-3	0	+	0	0	.
chr11	114149842	114149843	chr11:114149843:T:C	rs115421355	T	C	T	Sox2_MA0143.3	-15	0	+	0	0	.
chr11	114179266	114179267	chr11:114179267:C:T	chr11:114179267:C:T	C	T	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr11	114179267	114179268	chr11:114179268:A:T	rs1399502938	A	T	A	Sox2_MA0143.3	-10	0	-	0	0	.
chr11	114198482	114198483	chr11:114198483:A:G	chr11:114198483:A:G	A	G	A	Sox2_MA0143.3	-18	0	+	0	0	.
chr11	114232819	114232820	chr11:114232820:A:G	rs686501	A	G	G	Sox2_MA0143.3	23	0	+	0	0	.
chr11	114264819	114264820	chr11:114264820:T:G	rs79925152	T	G	T	Sox2_MA0143.3	8	0	-	0	0	.
chr11	114271072	114271073	chr11:114271073:G:A	rs74516396	G	A	g	Sox2_MA0143.3	-12	0	+	0	0	.
chr11	114282782	114282783	chr11:114282783:G:C	rs4936293	G	C	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr11	114317741	114317742	chr11:114317742:C:T	rs949370	C	T	T	Sox2_MA0143.3	-20	0	+	0	0	.
chr11	114400381	114400382	chr11:114400382:C:A	rs370321807	C	A	C	Sox2_MA0143.3	16	0	+	0	0	.
chr11	114530524	114530525	chr11:114530525:A:G	rs7941796	A	G	G	Sox2_MA0143.3	2	1	+	9.613475778572903	3.494828071296623	CCATTGTT
chr11	114570134	114570135	chr11:114570135:C:G	rs11215061	C	G	C	Sox2_MA0143.3	1	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr11	114678223	114678224	chr11:114678224:T:A	rs75038871	T	A	T	Sox2_MA0143.3	23	0	-	0	0	.
chr11	114783124	114783125	chr11:114783125:C:A	rs7108229	C	A	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr11	114799791	114799792	chr11:114799792:C:T	rs11215210	C	T	A	Sox2_MA0143.3	-2	0	-	0	0	.
chr11	114799794	114799795	chr11:114799795:C:T	rs10891758	C	T	T	Sox2_MA0143.3	-5	0	-	0	0	.
chr11	114985289	114985290	chr11:114985290:C:A	rs10891790	C	A	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr11	115088005	115088006	chr11:115088006:T:A	rs76958659	T	A	T	Sox2_MA0143.3	-6	0	-	0	0	.
chr11	115163719	115163720	chr11:115163720:C:T	rs4936320	C	T	C	Sox2_MA0143.3	11	0	-	0	0	.
chr11	115194171	115194172	chr11:115194172:C:G	rs1170043416	C	G	C	Sox2_MA0143.3	0	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr11	115220789	115220790	chr11:115220790:G:A	rs12791813	G	A	G	Sox2_MA0143.3	27	0	+	0	0	.
chr11	115387048	115387049	chr11:115387049:C:G	rs17443832	C	G	C	Sox2_MA0143.3	-12	0	-	0	0	.
chr11	115525780	115525781	chr11:115525781:C:T	rs76309706	C	T	C	Sox2_MA0143.3	5	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr11	115561536	115561537	chr11:115561537:A:G	rs1870675	A	G	G	Sox2_MA0143.3	-9	0	+	0	0	.
chr11	115665491	115665492	chr11:115665492:T:C	rs1784998	T	C	C	Sox2_MA0143.3	19	0	+	0	0	.
chr11	115725085	115725086	chr11:115725086:A:C	rs67688714	A	C	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr11	115725102	115725103	chr11:115725103:C:T	rs67474112	C	T	T	Sox2_MA0143.3	-3	0	+	0	0	.
chr11	115733986	115733987	chr11:115733987:C:T	rs11215671	C	T	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr11	115748103	115748104	chr11:115748104:G:A	rs138173091	G	A	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr11	115917708	115917709	chr11:115917709:C:A	rs1320654	C	A	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr11	115921530	115921531	chr11:115921531:A:T	rs436886	A	T	T	Sox2_MA0143.3	-6	0	+	0	0	.
chr11	116101352	116101353	chr11:116101353:T:C	rs11828640	T	C	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr11	116107553	116107554	chr11:116107554:G:T	rs2217084	G	T	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr11	116134403	116134404	chr11:116134404:T:C	rs548046	T	C	T	Sox2_MA0143.3	-8	0	+	0	0	.
chr11	116176562	116176563	chr11:116176563:C:T	rs117786377	C	T	C	Sox2_MA0143.3	19	0	-	0	0	.
chr11	116207689	116207690	chr11:116207690:G:T	rs2621492	G	T	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr11	116278779	116278780	chr11:116278780:A:G	rs11215872	A	G	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr11	116310617	116310618	chr11:116310618:A:G	rs2033888	A	G	A	Sox2_MA0143.3	7	1	+	3.5547341015215945	8.864090315184848	CCTTTGTA
chr11	116311473	116311474	chr11:116311474:G:A	rs10502217	G	A	G	Sox2_MA0143.3	8	0	-	0	0	.
chr11	116323528	116323529	chr11:116323529:A:G	rs10790135	A	G	A	Sox2_MA0143.3	13	0	-	0	0	.
chr11	116329225	116329226	chr11:116329226:T:C	rs893840	T	C	T	Sox2_MA0143.3	-5	0	-	0	0	.
chr11	116386349	116386350	chr11:116386350:G:A	rs516121	G	A	a	Sox2_MA0143.3	13	0	-	0	0	.
chr11	116428282	116428283	chr11:116428283:G:A	rs12362811	G	A	G	Sox2_MA0143.3	18	0	+	0	0	.
chr11	116428286	116428287	chr11:116428287:C:T	rs12362796	C	T	T	Sox2_MA0143.3	22	0	+	0	0	.
chr11	116446681	116446682	chr11:116446682:C:T	rs556514	C	T	C	Sox2_MA0143.3	9	0	-	0	0	.
chr11	116446687	116446688	chr11:116446688:A:G	rs556550	A	G	A	Sox2_MA0143.3	3	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr11	116453288	116453289	chr11:116453289:G:C	rs78034012	G	C	G	Sox2_MA0143.3	25	0	-	0	0	.
chr11	116462121	116462122	chr11:116462122:C:G	rs190266688	C	G	c	Sox2_MA0143.3	-15	0	-	0	0	.
chr11	116462125	116462126	chr11:116462126:C:T	rs574268362	C	T	c	Sox2_MA0143.3	-19	0	-	0	0	.
chr11	116513862	116513863	chr11:116513863:C:T	rs12361273	C	T	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr11	116539070	116539071	chr11:116539071:C:A	rs951839	C	A	A	Sox2_MA0143.3	0	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr11	116579745	116579746	chr11:116579746:A:G	rs61362984	A	G	G	Sox2_MA0143.3	25	0	-	0	0	.
chr11	116634722	116634723	chr11:116634723:G:A	rs10892001	G	A	G	Sox2_MA0143.3	0	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr11	116642029	116642030	chr11:116642030:G:A	rs116892227	G	A	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr11	116653037	116653038	chr11:116653038:A:T	rs148621492	A	T	A	Sox2_MA0143.3	6	1	-	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr11	116715566	116715567	chr11:116715567:T:C	rs7350481	T	C	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr11	116772038	116772039	chr11:116772039:G:A	rs148028577	G	A	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr11	116791109	116791110	chr11:116791110:T:C	rs2072560	T	C	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr11	116791614	116791615	chr11:116791615:G:T	rs12287066	G	T	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr11	116791635	116791636	chr11:116791636:G:T	rs34282181	G	T	G	Sox2_MA0143.3	5	1	+	9.206767037375712	2.298012258060492	CCTTTGTC
chr11	116830957	116830958	chr11:116830958:T:A	rs2070666	T	A	T	Sox2_MA0143.3	24	0	-	0	0	.
chr11	116837946	116837947	chr11:116837947:T:G	rs12718466	T	G	T	Sox2_MA0143.3	4	1	+	8.676919043985553	1.7681642646703322	CCATTGTG
chr11	116849372	116849373	chr11:116849373:T:C	rs2289893	T	C	C	Sox2_MA0143.3	2	1	-	9.019595766176417	2.900948058900136	CCATTGTC
chr11	116855464	116855465	chr11:116855465:C:T	rs149462130	C	T	C	Sox2_MA0143.3	20	0	-	0	0	.
chr11	116861795	116861796	chr11:116861796:G:T	rs2075292	G	T	T	Sox2_MA0143.3	16	0	-	0	0	.
chr11	116861802	116861803	chr11:116861803:G:A	rs117010832	G	A	G	Sox2_MA0143.3	9	0	-	0	0	.
chr11	116862555	116862556	chr11:116862556:G:A	rs112352791	G	A	G	Sox2_MA0143.3	11	0	+	0	0	.
chr11	116953903	116953904	chr11:116953904:G:A	rs2289890	G	A	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr11	117006442	117006443	chr11:117006443:A:C	rs10790169	A	C	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr11	117054325	117054326	chr11:117054326:G:A	rs723955	G	A	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr11	117060171	117060172	chr11:117060172:A:G	rs4938333	A	G	A	Sox2_MA0143.3	-20	0	-	0	0	.
chr11	117106061	117106062	chr11:117106062:T:C	rs4388921	T	C	c	Sox2_MA0143.3	-3	0	+	0	0	.
chr11	117174231	117174232	chr11:117174232:T:C	rs1050566009	T	C	t	Sox2_MA0143.3	12	0	-	0	0	.
chr11	117361674	117361675	chr11:117361675:A:G	rs17500548	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr11	117379123	117379124	chr11:117379124:G:A	rs1479602675	G	A	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr11	117443557	117443558	chr11:117443558:T:C	chr11:117443558:T:C	T	C	T	Sox2_MA0143.3	11	0	-	0	0	.
chr11	117445604	117445605	chr11:117445605:G:A	rs4936378	G	A	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr11	117453235	117453236	chr11:117453236:C:T	rs7946391	C	T	C	Sox2_MA0143.3	1	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr11	117478685	117478686	chr11:117478686:A:G	rs56057635	A	G	A	Sox2_MA0143.3	20	0	+	0	0	.
chr11	117492710	117492711	chr11:117492711:C:A	rs11216425	C	A	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr11	117530028	117530029	chr11:117530029:C:G	chr11:117530029:C:G	C	G	T	Sox2_MA0143.3	20	0	+	0	0	.
chr11	117530032	117530033	chr11:117530033:C:T	rs376022093	C	T	C	Sox2_MA0143.3	24	0	+	0	0	.
chr11	117537440	117537441	chr11:117537441:G:C	rs473343	G	C	G	Sox2_MA0143.3	0	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr11	117604336	117604337	chr11:117604337:T:A	rs490914	T	A	G	Sox2_MA0143.3	23	0	+	0	0	.
chr11	117699207	117699208	chr11:117699208:T:C	rs17121096	T	C	C	Sox2_MA0143.3	14	0	-	0	0	.
chr11	117699215	117699216	chr11:117699216:A:T	rs56359135	A	T	A	Sox2_MA0143.3	6	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr11	117702253	117702254	chr11:117702254:T:C	rs74660871	T	C	T	Sox2_MA0143.3	-1	0	+	0	0	.
chr11	117723572	117723573	chr11:117723573:G:T	rs76628593	G	T	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr11	117789559	117789560	chr11:117789560:C:G	rs948100	C	G	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr11	117831974	117831975	chr11:117831975:C:T	rs10790212	C	T	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr11	117842133	117842134	chr11:117842134:G:C	rs17596129	G	C	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr11	117842140	117842141	chr11:117842141:G:A	rs1279508167	G	A	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr11	117842275	117842276	chr11:117842276:C:A	rs560521218	C	A	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr11	117857802	117857803	chr11:117857803:C:T	rs77007992	C	T	C	Sox2_MA0143.3	16	0	-	0	0	.
chr11	117862648	117862649	chr11:117862649:A:G	rs11216592	A	G	A	Sox2_MA0143.3	23	0	-	0	0	.
chr11	117875700	117875701	chr11:117875701:A:G	chr11:117875701:A:G	A	G	A	Sox2_MA0143.3	-20	0	-	0	0	.
chr11	117876232	117876233	chr11:117876233:G:T	rs73588911	G	T	G	Sox2_MA0143.3	1	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr11	117907976	117907977	chr11:117907977:C:A	rs146795295	C	A	C	Sox2_MA0143.3	0	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr11	117977413	117977414	chr11:117977414:A:C	rs11216662	A	C	A	Sox2_MA0143.3	10	0	-	0	0	.
chr11	118009310	118009311	chr11:118009311:G:A	rs183220894	G	A	G	Sox2_MA0143.3	13	0	-	0	0	.
chr11	118053439	118053440	chr11:118053440:G:A	rs79944284	G	A	G	Sox2_MA0143.3	0	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr11	118099973	118099974	chr11:118099974:G:A	rs11216748	G	A	A	Sox2_MA0143.3	-4	0	+	0	0	.
chr11	118099980	118099981	chr11:118099981:T:C	rs11216749	T	C	T	Sox2_MA0143.3	3	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr11	118126711	118126712	chr11:118126712:G:A	rs72488012	G	A	g	Sox2_MA0143.3	0	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr11	118126757	118126758	chr11:118126758:A:G	rs79754446	A	G	A	Sox2_MA0143.3	-8	0	-	0	0	.
chr11	118145488	118145489	chr11:118145489:C:T	rs113939995	C	T	C	Sox2_MA0143.3	21	0	-	0	0	.
chr11	118145523	118145524	chr11:118145524:G:A	rs113900551	G	A	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr11	118146718	118146719	chr11:118146719:C:A	rs1793157	C	A	A	Sox2_MA0143.3	9	0	+	0	0	.
chr11	118146729	118146730	chr11:118146730:A:G	rs1786183	A	G	A	Sox2_MA0143.3	20	0	+	0	0	.
chr11	118171890	118171891	chr11:118171891:G:A	rs76248354	G	A	G	Sox2_MA0143.3	-12	0	+	0	0	.
chr11	118171891	118171892	chr11:118171892:T:C	rs79938256	T	C	T	Sox2_MA0143.3	-11	0	+	0	0	.
chr11	118180242	118180243	chr11:118180243:G:A	rs75709684	G	A	G	Sox2_MA0143.3	-14	0	+	0	0	.
chr11	118214546	118214547	chr11:118214547:A:C	rs144246094	A	C	A	Sox2_MA0143.3	-10	0	+	0	0	.
chr11	118264437	118264438	chr11:118264438:C:T	rs73604373	C	T	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr11	118304824	118304825	chr11:118304825:A:G	rs2231441	A	G	A	Sox2_MA0143.3	6	1	-	9.613475778572903	2.7047209992576837	CCATTGTT
chr11	118317560	118317561	chr11:118317561:G:A	rs56754533	G	A	G	Sox2_MA0143.3	8	0	+	0	0	.
chr11	118540708	118540709	chr11:118540709:A:C	rs11216886	A	C	C	Sox2_MA0143.3	21	0	+	0	0	.
chr11	118685374	118685375	chr11:118685375:C:T	rs613377	C	T	t	Sox2_MA0143.3	15	0	+	0	0	.
chr11	118707280	118707281	chr11:118707281:G:A	rs480958	G	A	A	Sox2_MA0143.3	19	0	+	0	0	.
chr11	118856622	118856623	chr11:118856623:G:T	rs11217067	G	T	G	Sox2_MA0143.3	-11	0	+	0	0	.
chr11	118872377	118872378	chr11:118872378:T:A	rs111953774	T	A	T	Sox2_MA0143.3	21	0	+	0	0	.
chr11	118872381	118872382	chr11:118872382:G:C	rs34692987	G	C	G	Sox2_MA0143.3	25	0	+	0	0	.
chr11	118876059	118876060	chr11:118876060:T:G	rs4938576	T	G	T	Sox2_MA0143.3	-6	0	+	0	0	.
chr11	118975755	118975756	chr11:118975756:G:A	rs4938602	G	A	G	Sox2_MA0143.3	19	0	-	0	0	.
chr11	118975771	118975772	chr11:118975772:A:G	rs4938603	A	G	G	Sox2_MA0143.3	3	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr11	119070246	119070247	chr11:119070247:C:G	rs1784302	C	G	C	Sox2_MA0143.3	20	0	-	0	0	.
chr11	119070256	119070257	chr11:119070257:T:C	rs191133267	T	C	T	Sox2_MA0143.3	10	0	-	0	0	.
chr11	119081660	119081661	chr11:119081661:A:G	rs4614	A	G	G	Sox2_MA0143.3	18	0	-	0	0	.
chr11	119320383	119320384	chr11:119320384:C:A	rs944609414	C	A	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr11	119346744	119346745	chr11:119346745:C:T	rs948415	C	T	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr11	119367035	119367036	chr11:119367036:C:T	rs138094362	C	T	C	Sox2_MA0143.3	11	0	-	0	0	.
chr11	119371882	119371883	chr11:119371883:G:A	rs759502299	G	A	G	Sox2_MA0143.3	16	0	+	0	0	.
chr11	119434882	119434883	chr11:119434883:T:C	rs4938652	T	C	T	Sox2_MA0143.3	-18	0	+	0	0	.
chr11	119434900	119434901	chr11:119434901:C:T	rs4938653	C	T	C	Sox2_MA0143.3	0	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr11	119492451	119492452	chr11:119492452:A:G	rs917089178	A	G	A	Sox2_MA0143.3	4	1	-	9.800647049772198	2.8918922704569785	CCTTTGTT
chr11	119506778	119506779	chr11:119506779:G:A	rs7931132	G	A	-	Sox2_MA0143.3	19	0	-	0	0	.
chr11	119515883	119515884	chr11:119515884:C:T	rs672113	C	T	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr11	119515885	119515886	chr11:119515886:C:A	rs78971595	C	A	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr11	119584453	119584454	chr11:119584454:T:C	rs7114739	T	C	C	Sox2_MA0143.3	24	0	+	0	0	.
chr11	119614368	119614369	chr11:119614369:C:G	rs871800	C	G	C	Sox2_MA0143.3	10	0	-	0	0	.
chr11	119727540	119727541	chr11:119727541:T:C	chr11:119727541:T:C	T	C	T	Sox2_MA0143.3	-7	0	-	0	0	.
chr11	119748086	119748087	chr11:119748087:A:G	rs989231436	A	G	A	Sox2_MA0143.3	-4	0	-	0	0	.
chr11	119773181	119773182	chr11:119773182:G:T	rs141341926	G	T	G	Sox2_MA0143.3	0	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr11	119912381	119912382	chr11:119912382:G:C	rs77830985	G	C	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr11	119989741	119989742	chr11:119989742:G:A	rs59415047	G	A	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr11	119994149	119994150	chr11:119994150:C:G	rs115320148	C	G	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr11	119994165	119994166	chr11:119994166:T:C	rs149789332	T	C	T	Sox2_MA0143.3	6	1	+	9.206767037375712	2.298012258060492	CCTTTGTC
chr11	120065079	120065080	chr11:120065080:G:T	rs2034643	G	T	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr11	120080637	120080638	chr11:120080638:G:C	rs11217678	G	C	G	Sox2_MA0143.3	22	0	-	0	0	.
chr11	120096847	120096848	chr11:120096848:T:C	rs613004	T	C	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr11	120122119	120122120	chr11:120122120:T:C	rs142831663	T	C	T	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr11	120184617	120184618	chr11:120184618:C:G	rs73004764	C	G	C	Sox2_MA0143.3	26	0	-	0	0	.
chr11	120184660	120184661	chr11:120184661:T:C	rs12291620	T	C	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr11	120392212	120392213	chr11:120392213:G:A	rs7107211	G	A	G	Sox2_MA0143.3	23	0	+	0	0	.
chr11	120471013	120471014	chr11:120471014:T:C	rs11217879	T	C	T	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr11	120517675	120517676	chr11:120517676:C:T	rs77426942	C	T	C	Sox2_MA0143.3	23	0	-	0	0	.
chr11	120608415	120608416	chr11:120608416:A:G	rs34884722	A	G	A	Sox2_MA0143.3	6	1	-	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr11	120683227	120683228	chr11:120683228:G:T	rs35407634	G	T	G	Sox2_MA0143.3	18	0	-	0	0	.
chr11	120683233	120683234	chr11:120683234:A:G	rs34612914	A	G	G	Sox2_MA0143.3	12	0	-	0	0	.
chr11	120685847	120685848	chr11:120685848:G:T	rs7106140	G	T	T	Sox2_MA0143.3	-9	0	+	0	0	.
chr11	120780466	120780467	chr11:120780467:T:G	rs184799334	T	G	T	Sox2_MA0143.3	-1	0	+	0	0	.
chr11	120863507	120863508	chr11:120863508:G:A	rs370075597	G	A	G	Sox2_MA0143.3	23	0	+	0	0	.
chr11	120884013	120884014	chr11:120884014:G:A	rs78034335	G	A	G	Sox2_MA0143.3	12	0	-	0	0	.
chr11	120909156	120909157	chr11:120909157:G:A	rs78997569	G	A	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr11	120953384	120953385	chr11:120953385:C:T	rs597670	C	T	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr11	121220182	121220183	chr11:121220183:A:G	rs543954	A	G	A	Sox2_MA0143.3	13	0	-	0	0	.
chr11	121356470	121356471	chr11:121356471:G:A	rs12282849	G	A	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr11	121369521	121369522	chr11:121369522:T:A	rs35003739	T	A	T	Sox2_MA0143.3	-9	0	+	0	0	.
chr11	121379270	121379271	chr11:121379271:C:T	rs191290648	C	T	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr11	121389647	121389648	chr11:121389648:T:C	rs662738	T	C	T	Sox2_MA0143.3	-18	0	+	0	0	.
chr11	121389653	121389654	chr11:121389654:G:A	rs770562789	G	A	A	Sox2_MA0143.3	-12	0	+	0	0	.
chr11	121389655	121389656	chr11:121389656:A:G	rs78134852	A	G	A	Sox2_MA0143.3	-10	0	+	0	0	.
chr11	121394048	121394049	chr11:121394049:G:A	rs11605778	G	A	A	Sox2_MA0143.3	24	0	+	0	0	.
chr11	121441744	121441745	chr11:121441745:C:T	rs118092030	C	T	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr11	121482999	121483000	chr11:121483000:G:A	rs117897351	G	A	G	Sox2_MA0143.3	10	0	+	0	0	.
chr11	121514804	121514805	chr11:121514805:A:G	rs141310066	A	G	A	Sox2_MA0143.3	11	0	+	0	0	.
chr11	121531675	121531676	chr11:121531676:T:C	rs11218322	T	C	T	Sox2_MA0143.3	-9	0	+	0	0	.
chr11	121552123	121552124	chr11:121552124:A:G	rs146104492	A	G	A	Sox2_MA0143.3	19	0	+	0	0	.
chr11	121610697	121610698	chr11:121610698:C:T	rs726601	C	T	C	Sox2_MA0143.3	15	0	+	0	0	.
chr11	121655950	121655951	chr11:121655951:G:A	rs57805028	G	A	G	Sox2_MA0143.3	17	0	+	0	0	.
chr11	121703629	121703630	chr11:121703630:C:T	rs616412	C	T	T	Sox2_MA0143.3	-16	0	-	0	0	.
chr11	121801057	121801058	chr11:121801058:G:C	rs79341042	G	C	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr11	122163626	122163627	chr11:122163627:T:G	rs512540	T	G	T	Sox2_MA0143.3	14	0	-	0	0	.
chr11	122165526	122165527	chr11:122165527:A:G	rs79212143	A	G	A	Sox2_MA0143.3	6	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr11	122171242	122171243	chr11:122171243:T:G	rs906288197	T	G	T	Sox2_MA0143.3	6	1	+	8.676919043985553	1.7681642646703326	CCATTGTG
chr11	122175132	122175133	chr11:122175133:C:T	rs12785847	C	T	C	Sox2_MA0143.3	24	0	+	0	0	.
chr11	122320417	122320418	chr11:122320418:C:T	rs757602462	C	T	C	Sox2_MA0143.3	23	0	-	0	0	.
chr11	122343013	122343014	chr11:122343014:G:A	rs12363769	G	A	G	Sox2_MA0143.3	24	0	-	0	0	.
chr11	122394493	122394494	chr11:122394494:A:G	rs685419	A	G	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr11	122629186	122629187	chr11:122629187:A:G	rs11607161	A	G	A	Sox2_MA0143.3	-8	0	+	0	0	.
chr11	122629204	122629205	chr11:122629205:T:C	rs115741963	T	C	T	Sox2_MA0143.3	10	0	+	0	0	.
chr11	122691411	122691412	chr11:122691412:G:A	chr11:122691412:G:A	G	A	G	Sox2_MA0143.3	-11	0	+	0	0	.
chr11	122691431	122691432	chr11:122691432:G:A	rs79977198	G	A	G	Sox2_MA0143.3	9	0	+	0	0	.
chr11	122737995	122737996	chr11:122737996:C:T	rs61910264	C	T	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr11	122813701	122813702	chr11:122813702:T:A	rs113163903	T	A	T	Sox2_MA0143.3	25	0	-	0	0	.
chr11	122873211	122873212	chr11:122873212:T:A	rs11821677	T	A	T	Sox2_MA0143.3	-11	0	-	0	0	.
chr11	122919467	122919468	chr11:122919468:G:A	rs12422101	G	A	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr11	122983725	122983726	chr11:122983726:A:C	rs80253302	A	C	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr11	123070104	123070105	chr11:123070105:T:C	rs3763896	T	C	T	Sox2_MA0143.3	-15	0	-	0	0	.
chr11	123072786	123072787	chr11:123072787:T:C	rs7949414	T	C	C	Sox2_MA0143.3	17	0	+	0	0	.
chr11	123100749	123100750	chr11:123100750:G:A	rs11218981	G	A	A	Sox2_MA0143.3	5	1	+	8.676919043985553	1.7681642646703324	CCATTGTG
chr11	123137075	123137076	chr11:123137076:A:T	rs115029605	A	T	A	Sox2_MA0143.3	23	0	-	0	0	.
chr11	123158836	123158837	chr11:123158837:A:G	rs10400356	A	G	A	Sox2_MA0143.3	-15	0	-	0	0	.
chr11	123483257	123483258	chr11:123483258:G:A	rs139514513	G	A	G	Sox2_MA0143.3	19	0	-	0	0	.
chr11	123483261	123483262	chr11:123483262:A:G	rs978690152	A	G	A	Sox2_MA0143.3	15	0	-	0	0	.
chr11	123491525	123491526	chr11:123491526:T:C	rs115632631	T	C	T	Sox2_MA0143.3	11	0	-	0	0	.
chr11	123546689	123546690	chr11:123546690:T:G	rs73027953	T	G	T	Sox2_MA0143.3	-20	0	-	0	0	.
chr11	123559281	123559282	chr11:123559282:C:G	rs702736	C	G	G	Sox2_MA0143.3	19	0	-	0	0	.
chr11	123575299	123575300	chr11:123575300:C:T	rs11219202	C	T	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr11	123853211	123853212	chr11:123853212:A:G	rs78932563	A	G	A	Sox2_MA0143.3	8	0	-	0	0	.
chr11	123853237	123853238	chr11:123853238:C:T	rs12283877	C	T	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr11	123870373	123870374	chr11:123870374:G:A	rs61908533	G	A	-	Sox2_MA0143.3	-6	0	+	0	0	.
chr11	123883370	123883371	chr11:123883371:A:G	rs61908536	A	G	A	Sox2_MA0143.3	24	0	-	0	0	.
chr11	124126790	124126791	chr11:124126791:A:C	rs10750258	A	C	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr11	124168110	124168111	chr11:124168111:A:G	rs117709744	A	G	A	Sox2_MA0143.3	-10	0	-	0	0	.
chr11	124178992	124178993	chr11:124178993:G:T	rs2508875	G	T	T	Sox2_MA0143.3	-3	0	-	0	0	.
chr11	124193893	124193894	chr11:124193894:C:A	rs76413184	C	A	c	Sox2_MA0143.3	18	0	+	0	0	.
chr11	124193901	124193902	chr11:124193902:G:A	rs11219490	G	A	N	Sox2_MA0143.3	26	0	+	0	0	.
chr11	124194519	124194520	chr11:124194520:C:A	rs2508892	C	A	c	Sox2_MA0143.3	-4	0	-	0	0	.
chr11	124255812	124255813	chr11:124255813:C:T	rs78811786	C	T	C	Sox2_MA0143.3	11	0	-	0	0	.
chr11	124278468	124278469	chr11:124278469:G:A	rs10893196	G	A	.	Sox2_MA0143.3	16	0	+	0	0	.
chr11	124538518	124538519	chr11:124538519:A:G	rs7129642	A	G	A	Sox2_MA0143.3	4	1	-	9.206767037375712	2.2980122580604916	CCTTTGTC
chr11	124567340	124567341	chr11:124567341:T:A	rs10893267	T	A	T	Sox2_MA0143.3	-11	0	-	0	0	.
chr11	124584105	124584106	chr11:124584106:A:C	rs10790706	A	C	C	Sox2_MA0143.3	6	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr11	124754957	124754958	chr11:124754958:T:C	rs6590090	T	C	C	Sox2_MA0143.3	6	1	+	9.019595766176417	2.110840986861197	CCATTGTC
chr11	124811782	124811783	chr11:124811783:A:C	rs594367	A	C	A	Sox2_MA0143.3	22	0	-	0	0	.
chr11	124839524	124839525	chr11:124839525:G:T	rs531366471	G	T	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr11	124898948	124898949	chr11:124898949:C:T	rs567953452	C	T	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr11	124898982	124898983	chr11:124898983:C:T	rs974408304	C	T	C	Sox2_MA0143.3	19	0	+	0	0	.
chr11	124925257	124925258	chr11:124925258:G:T	rs4936958	G	T	G	Sox2_MA0143.3	5	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr11	124936087	124936088	chr11:124936088:A:G	rs6590110	A	G	A	Sox2_MA0143.3	16	0	+	0	0	.
chr11	124953751	124953752	chr11:124953752:T:C	rs7120629	T	C	T	Sox2_MA0143.3	13	0	-	0	0	.
chr11	125072801	125072802	chr11:125072802:C:T	rs11219888	C	T	C	Sox2_MA0143.3	12	0	-	0	0	.
chr11	125088225	125088226	chr11:125088226:A:G	rs3802808	A	G	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr11	125112302	125112303	chr11:125112303:C:T	rs11219906	C	T	C	Sox2_MA0143.3	14	0	-	0	0	.
chr11	125112335	125112336	chr11:125112336:C:T	rs111239441	C	T	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr11	125188284	125188285	chr11:125188285:C:A	rs940501580	C	A	C	Sox2_MA0143.3	25	0	+	0	0	.
chr11	125191957	125191958	chr11:125191958:C:T	rs633662	C	T	C	Sox2_MA0143.3	16	0	-	0	0	.
chr11	125204513	125204514	chr11:125204514:A:G	rs585926	A	G	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr11	125204543	125204544	chr11:125204544:A:G	rs585974	A	G	G	Sox2_MA0143.3	22	0	+	0	0	.
chr11	125224090	125224091	chr11:125224091:G:A	rs765149327	G	A	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr11	125243460	125243461	chr11:125243461:C:T	rs11219984	C	T	C	Sox2_MA0143.3	22	0	+	0	0	.
chr11	125247180	125247181	chr11:125247181:A:G	rs12805092	A	G	A	Sox2_MA0143.3	-18	0	+	0	0	.
chr11	125247211	125247212	chr11:125247212:G:C	rs10893356	G	C	C	Sox2_MA0143.3	13	0	+	0	0	.
chr11	125314990	125314991	chr11:125314991:A:G	rs188845333	A	G	A	Sox2_MA0143.3	11	0	+	0	0	.
chr11	125348784	125348785	chr11:125348785:C:T	rs116783858	C	T	C	Sox2_MA0143.3	1	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr11	125411179	125411180	chr11:125411180:G:C	rs61917823	G	C	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr11	125458031	125458032	chr11:125458032:G:C	rs559094887	G	C	G	Sox2_MA0143.3	9	0	+	0	0	.
chr11	125461742	125461743	chr11:125461743:A:G	rs12223186	A	G	A	Sox2_MA0143.3	27	0	+	0	0	.
chr11	125509462	125509463	chr11:125509463:T:C	rs116572281	T	C	T	Sox2_MA0143.3	-18	0	-	0	0	.
chr11	125515726	125515727	chr11:125515727:C:T	rs11220110	C	T	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr11	125517626	125517627	chr11:125517627:G:A	rs189740772	G	A	G	Sox2_MA0143.3	20	0	+	0	0	.
chr11	125868722	125868723	chr11:125868723:T:G	rs4055940	T	G	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr11	125950338	125950339	chr11:125950339:C:T	rs10893451	C	T	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr11	125951844	125951845	chr11:125951845:A:C	chr11:125951845:A:C	A	C	A	Sox2_MA0143.3	12	0	-	0	0	.
chr11	125951867	125951868	chr11:125951868:C:T	rs12797894	C	T	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr11	125978586	125978587	chr11:125978587:T:C	rs636268	T	C	C	Sox2_MA0143.3	-20	0	-	0	0	.
chr11	126139014	126139015	chr11:126139015:G:A	rs567508	G	A	A	Sox2_MA0143.3	5	1	+	9.613475778572903	2.7047209992576837	CCATTGTT
chr11	126139036	126139037	chr11:126139037:A:G	rs632289	A	G	G	Sox2_MA0143.3	27	0	+	0	0	.
chr11	126166218	126166219	chr11:126166219:G:A	rs17135256	G	A	G	Sox2_MA0143.3	12	0	+	0	0	.
chr11	126281649	126281650	chr11:126281650:G:A	rs904546	G	A	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr11	126336480	126336481	chr11:126336481:G:A	rs240543	G	A	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr11	126367385	126367386	chr11:126367386:G:A	rs60648773	G	A	A	Sox2_MA0143.3	10	0	+	0	0	.
chr11	126403630	126403631	chr11:126403631:C:G	rs570248800	C	G	C	Sox2_MA0143.3	14	0	-	0	0	.
chr11	126416114	126416115	chr11:126416115:G:A	rs12288924	G	A	G	Sox2_MA0143.3	19	0	+	0	0	.
chr11	126422700	126422701	chr11:126422701:A:G	rs4937128	A	G	G	Sox2_MA0143.3	6	1	-	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr11	126475156	126475157	chr11:126475157:G:C	rs75671591	G	C	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr11	126527924	126527925	chr11:126527925:A:G	rs619552	A	G	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr11	126595252	126595253	chr11:126595253:C:T	rs12794212	C	T	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr11	126611544	126611545	chr11:126611545:T:C	rs571911	T	C	T	Sox2_MA0143.3	19	0	+	0	0	.
chr11	126647816	126647817	chr11:126647817:C:T	rs190527430	C	T	C	Sox2_MA0143.3	13	0	+	0	0	.
chr11	126655400	126655401	chr11:126655401:C:T	rs61899057	C	T	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr11	126658043	126658044	chr11:126658044:C:T	chr11:126658044:C:T	C	T	C	Sox2_MA0143.3	18	0	+	0	0	.
chr11	126695585	126695586	chr11:126695586:C:T	rs4937179	C	T	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr11	126839121	126839122	chr11:126839122:C:T	rs939513	C	T	T	Sox2_MA0143.3	-12	0	+	0	0	.
chr11	126851186	126851187	chr11:126851187:T:C	rs7104760	T	C	T	Sox2_MA0143.3	14	0	+	0	0	.
chr11	126905868	126905869	chr11:126905869:C:A	rs73569675	C	A	C	Sox2_MA0143.3	13	0	+	0	0	.
chr11	126926193	126926194	chr11:126926194:G:A	rs76520447	G	A	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr11	126937337	126937338	chr11:126937338:G:A	rs6590236	G	A	A	Sox2_MA0143.3	22	0	+	0	0	.
chr11	127037480	127037481	chr11:127037481:C:T	rs10893618	C	T	C	Sox2_MA0143.3	1	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr11	127052571	127052572	chr11:127052572:C:G	rs56694459	C	G	C	Sox2_MA0143.3	-12	0	-	0	0	.
chr11	127127227	127127228	chr11:127127228:C:T	rs144239858	C	T	C	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr11	127127234	127127235	chr11:127127235:T:C	rs6590245	T	C	T	Sox2_MA0143.3	7	1	+	9.800647049772198	9.206767037375712	CCTTTGTT
chr11	127175456	127175457	chr11:127175457:T:C	rs1944831	T	C	T	Sox2_MA0143.3	6	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr11	127191912	127191913	chr11:127191913:T:C	rs2510706	T	C	T	Sox2_MA0143.3	16	0	+	0	0	.
chr11	127194010	127194011	chr11:127194011:G:A	rs74629938	G	A	G	Sox2_MA0143.3	23	0	-	0	0	.
chr11	127215705	127215706	chr11:127215706:A:G	rs2513439	A	G	G	Sox2_MA0143.3	8	0	+	0	0	.
chr11	127374735	127374736	chr11:127374736:G:A	rs2618200	G	A	g	Sox2_MA0143.3	-8	0	+	0	0	.
chr11	127490350	127490351	chr11:127490351:A:G	rs367699940	A	G	A	Sox2_MA0143.3	2	1	+	9.613475778572903	3.494828071296623	CCATTGTT
chr11	127596108	127596109	chr11:127596109:T:C	rs9787953	T	C	T	Sox2_MA0143.3	-15	0	+	0	0	.
chr11	127866846	127866847	chr11:127866847:A:T	rs974628	A	T	A	Sox2_MA0143.3	-2	0	-	0	0	.
chr11	127902649	127902650	chr11:127902650:C:T	rs78701813	C	T	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr11	128026838	128026839	chr11:128026839:C:T	rs117872452	C	T	C	Sox2_MA0143.3	20	0	-	0	0	.
chr11	128026858	128026859	chr11:128026859:G:A	rs925306731	G	A	G	Sox2_MA0143.3	0	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr11	128026871	128026872	chr11:128026872:C:T	rs1428196779	C	T	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr11	128086656	128086657	chr11:128086657:G:A	rs719013	G	A	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr11	128108845	128108846	chr11:128108846:A:G	rs7949890	A	G	-	Sox2_MA0143.3	-8	0	-	0	0	.
chr11	128193763	128193764	chr11:128193764:C:T	rs1215886	C	T	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr11	128298152	128298153	chr11:128298153:T:A	rs10893842	T	A	T	Sox2_MA0143.3	17	0	-	0	0	.
chr11	128346796	128346797	chr11:128346797:C:T	rs4937323	C	T	C	Sox2_MA0143.3	11	0	+	0	0	.
chr11	128421733	128421734	chr11:128421734:C:G	rs7127295	C	G	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr11	128423974	128423975	chr11:128423975:T:C	rs10750398	T	C	C	Sox2_MA0143.3	15	0	+	0	0	.
chr11	128467631	128467632	chr11:128467632:C:T	rs11221319	C	T	C	Sox2_MA0143.3	23	0	+	0	0	.
chr11	128530735	128530736	chr11:128530736:A:G	rs35656079	A	G	A	Sox2_MA0143.3	-16	0	-	0	0	.
chr11	128566072	128566073	chr11:128566073:G:A	rs115291492	G	A	G	Sox2_MA0143.3	0	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr11	128654192	128654193	chr11:128654193:T:C	rs57801753	T	C	T	Sox2_MA0143.3	4	1	+	8.676919043985553	1.7681642646703322	CCATTGTG
chr11	128688382	128688383	chr11:128688383:G:C	rs11603247	G	C	G	Sox2_MA0143.3	11	0	-	0	0	.
chr11	128741567	128741568	chr11:128741568:C:T	rs74540741	C	T	C	Sox2_MA0143.3	8	0	-	0	0	.
chr11	128741622	128741623	chr11:128741623:G:A	rs644515	G	A	G	Sox2_MA0143.3	27	0	+	0	0	.
chr11	128774845	128774846	chr11:128774846:T:A	rs601627	T	A	T	Sox2_MA0143.3	-10	0	-	0	0	.
chr11	128814800	128814801	chr11:128814801:A:T	rs680916	A	T	T	Sox2_MA0143.3	2	1	-	8.864090315184848	8.676919043985553	CCTTTGTG
chr11	128900577	128900578	chr11:128900578:C:T	rs2846699	C	T	T	Sox2_MA0143.3	-16	0	+	0	0	.
chr11	128900578	128900579	chr11:128900579:A:G	rs2846698	A	G	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr11	128937310	128937311	chr11:128937311:A:G	rs2846689	A	G	A	Sox2_MA0143.3	-17	0	+	0	0	.
chr11	129061659	129061660	chr11:129061660:G:A	rs73013464	G	A	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr11	129089901	129089902	chr11:129089902:C:A	rs10893975	C	A	C	Sox2_MA0143.3	7	1	+	9.206767037375712	3.5547341015215945	CCTTTGTC
chr11	129089940	129089941	chr11:129089941:C:A	rs10790988	C	A	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr11	129143468	129143469	chr11:129143469:C:T	rs182353331	C	T	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr11	129143493	129143494	chr11:129143494:G:A	rs75310467	G	A	G	Sox2_MA0143.3	5	1	+	9.206767037375712	2.298012258060492	CCTTTGTC
chr11	129230081	129230082	chr11:129230082:T:C	rs114405768	T	C	T	Sox2_MA0143.3	-16	0	+	0	0	.
chr11	129252822	129252823	chr11:129252823:C:T	rs7941354	C	T	C	Sox2_MA0143.3	10	0	+	0	0	.
chr11	129261900	129261901	chr11:129261901:A:C	rs11221624	A	C	A	Sox2_MA0143.3	13	0	+	0	0	.
chr11	129291209	129291210	chr11:129291210:C:A	rs10790997	C	A	A	Sox2_MA0143.3	-5	0	-	0	0	.
chr11	129291210	129291211	chr11:129291211:G:A	rs117323181	G	A	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr11	129316274	129316275	chr11:129316275:A:G	rs79129870	A	G	A	Sox2_MA0143.3	-13	0	-	0	0	.
chr11	129372186	129372187	chr11:129372187:G:A	rs11821159	G	A	G	Sox2_MA0143.3	21	0	-	0	0	.
chr11	129435380	129435381	chr11:129435381:A:G	rs112116699	A	G	A	Sox2_MA0143.3	24	0	-	0	0	.
chr11	129727580	129727581	chr11:129727581:T:C	rs692611	T	C	T	Sox2_MA0143.3	16	0	-	0	0	.
chr11	129727730	129727731	chr11:129727731:G:T	rs187631632	G	T	G	Sox2_MA0143.3	0	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr11	129759042	129759043	chr11:129759043:T:C	rs692245	T	C	T	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr11	129866261	129866262	chr11:129866262:T:C	rs10894158	T	C	T	Sox2_MA0143.3	14	0	-	0	0	.
chr11	129931228	129931229	chr11:129931229:T:C	rs2277032	T	C	T	Sox2_MA0143.3	-5	0	+	0	0	.
chr11	129992867	129992868	chr11:129992868:C:G	rs147131193	C	G	C	Sox2_MA0143.3	8	0	+	0	0	.
chr11	130070560	130070561	chr11:130070561:C:T	rs113079288	C	T	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr11	130197330	130197331	chr11:130197331:G:A	rs2324004	G	A	A	Sox2_MA0143.3	-11	0	-	0	0	.
chr11	130203952	130203953	chr11:130203953:C:A	rs73038965	C	A	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr11	130205536	130205537	chr11:130205537:G:A	rs73038977	G	A	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr11	130205538	130205539	chr11:130205539:G:A	rs1786145	G	A	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr11	130319023	130319024	chr11:130319024:T:C	rs17139325	T	C	T	Sox2_MA0143.3	-6	0	-	0	0	.
chr11	130319033	130319034	chr11:130319034:C:A	rs74327585	C	A	A	Sox2_MA0143.3	-16	0	-	0	0	.
chr11	130403890	130403891	chr11:130403891:A:G	rs56152233	A	G	A	Sox2_MA0143.3	-15	0	-	0	0	.
chr11	130439565	130439566	chr11:130439566:C:T	rs10791076	C	T	c	Sox2_MA0143.3	17	0	-	0	0	.
chr11	130452568	130452569	chr11:130452569:G:A	rs11827019	G	A	A	Sox2_MA0143.3	-3	0	+	0	0	.
chr11	130483240	130483241	chr11:130483241:G:T	rs115631959	G	T	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr11	130674976	130674977	chr11:130674977:T:G	rs2951955	T	G	T	Sox2_MA0143.3	25	0	-	0	0	.
chr11	130785633	130785634	chr11:130785634:C:A	chr11:130785634:C:A	C	A	C	Sox2_MA0143.3	19	0	+	0	0	.
chr11	130828073	130828074	chr11:130828074:G:A	rs1032581687	G	A	G	Sox2_MA0143.3	10	0	-	0	0	.
chr11	130868828	130868829	chr11:130868829:T:C	rs12099327	T	C	T	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr11	130894952	130894953	chr11:130894953:A:G	rs1944148	A	G	G	Sox2_MA0143.3	6	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr11	130980381	130980382	chr11:130980382:T:C	rs10750457	T	C	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr11	131064229	131064230	chr11:131064230:G:C	rs4937596	G	C	G	Sox2_MA0143.3	22	0	+	0	0	.
chr11	131073483	131073484	chr11:131073484:T:G	rs1793229	T	G	G	Sox2_MA0143.3	20	0	-	0	0	.
chr11	131259564	131259565	chr11:131259565:C:T	rs11601547	C	T	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr11	131275966	131275967	chr11:131275967:G:C	rs1793762	G	C	G	Sox2_MA0143.3	24	0	-	0	0	.
chr11	131301419	131301420	chr11:131301420:A:G	rs1793812	A	G	A	Sox2_MA0143.3	-20	0	-	0	0	.
chr11	131407469	131407470	chr11:131407470:A:C	rs11222601	A	C	A	Sox2_MA0143.3	6	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr11	131474217	131474218	chr11:131474218:A:G	rs12575010	A	G	g	Sox2_MA0143.3	-8	0	+	0	0	.
chr11	131535088	131535089	chr11:131535089:G:A	rs564356930	G	A	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr11	131537937	131537938	chr11:131537938:T:C	rs385190	T	C	T	Sox2_MA0143.3	-8	0	-	0	0	.
chr11	131537938	131537939	chr11:131537939:C:T	rs385926	C	T	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr11	131615130	131615131	chr11:131615131:G:A	rs7105942	G	A	G	Sox2_MA0143.3	0	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr11	131674718	131674719	chr11:131674719:C:T	rs789538	C	T	T	Sox2_MA0143.3	18	0	+	0	0	.
chr11	131685546	131685547	chr11:131685547:T:C	rs2695827	T	C	C	Sox2_MA0143.3	6	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr11	131696779	131696780	chr11:131696780:C:T	rs186737268	C	T	C	Sox2_MA0143.3	27	0	+	0	0	.
chr11	131762915	131762916	chr11:131762916:C:T	rs77677053	C	T	C	Sox2_MA0143.3	22	0	+	0	0	.
chr11	131767620	131767621	chr11:131767621:G:C	chr11:131767621:G:C	G	C	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr11	131807495	131807496	chr11:131807496:T:C	rs150584302	T	C	T	Sox2_MA0143.3	-4	0	+	0	0	.
chr11	131811245	131811246	chr11:131811246:G:A	rs10894450	G	A	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr11	131819999	131820000	chr11:131820000:T:C	rs57260024	T	C	T	Sox2_MA0143.3	14	0	+	0	0	.
chr11	131833486	131833487	chr11:131833487:A:T	rs7104869	A	T	A	Sox2_MA0143.3	20	0	-	0	0	.
chr11	131884826	131884827	chr11:131884827:C:G	rs572299	C	G	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr11	131894113	131894114	chr11:131894114:A:T	rs7117683	A	T	A	Sox2_MA0143.3	4	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr11	131929630	131929631	chr11:131929631:G:A	rs476378	G	A	G	Sox2_MA0143.3	12	0	+	0	0	.
chr11	132078855	132078856	chr11:132078856:C:T	rs12272413	C	T	C	Sox2_MA0143.3	27	0	+	0	0	.
chr11	132096369	132096370	chr11:132096370:C:T	rs1106363	C	T	C	Sox2_MA0143.3	11	0	-	0	0	.
chr11	132207022	132207023	chr11:132207023:T:C	rs1975612	T	C	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr11	132349951	132349952	chr11:132349952:G:T	rs115892662	G	T	G	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr11	132401639	132401640	chr11:132401640:G:A	rs11223056	G	A	A	Sox2_MA0143.3	15	0	+	0	0	.
chr11	132401939	132401940	chr11:132401940:G:T	rs11223057	G	T	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr11	132402281	132402282	chr11:132402282:T:C	rs140644825	T	C	T	Sox2_MA0143.3	-16	0	-	0	0	.
chr11	132452013	132452014	chr11:132452014:C:T	rs2212482	C	T	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr11	132620647	132620648	chr11:132620648:G:T	rs11223152	G	T	N	Sox2_MA0143.3	13	0	-	0	0	.
chr11	132719439	132719440	chr11:132719440:G:T	rs76348706	G	T	G	Sox2_MA0143.3	17	0	-	0	0	.
chr11	132719476	132719477	chr11:132719477:C:T	rs3018398	C	T	C	Sox2_MA0143.3	-20	0	-	0	0	.
chr11	132789026	132789027	chr11:132789027:C:T	rs34783971	C	T	C	Sox2_MA0143.3	27	0	+	0	0	.
chr11	132832837	132832838	chr11:132832838:C:T	rs7938658	C	T	T	Sox2_MA0143.3	20	0	-	0	0	.
chr11	132910175	132910176	chr11:132910176:G:A	rs749422630	G	A	G	Sox2_MA0143.3	11	0	-	0	0	.
chr11	132910848	132910849	chr11:132910849:A:G	rs2725428	A	G	A	Sox2_MA0143.3	-10	0	+	0	0	.
chr11	132910857	132910858	chr11:132910858:A:G	rs2725429	A	G	A	Sox2_MA0143.3	-1	0	+	0	0	.
chr11	132911927	132911928	chr11:132911928:T:C	rs2725437	T	C	T	Sox2_MA0143.3	-16	0	+	0	0	.
chr11	133192512	133192513	chr11:133192513:G:A	rs7121368	G	A	A	Sox2_MA0143.3	-15	0	+	0	0	.
chr11	133311729	133311730	chr11:133311730:A:G	rs73602412	A	G	A	Sox2_MA0143.3	-3	0	+	0	0	.
chr11	133340122	133340123	chr11:133340123:G:A	rs12416922	G	A	G	Sox2_MA0143.3	14	0	+	0	0	.
chr11	133509874	133509875	chr11:133509875:G:C	rs73025680	G	C	G	Sox2_MA0143.3	10	0	+	0	0	.
chr11	133512347	133512348	chr11:133512348:A:G	rs73025687	A	G	A	Sox2_MA0143.3	4	1	-	3.5547341015215945	-3.3540206777936254	CCTTTGTA
chr11	133621697	133621698	chr11:133621698:A:G	rs4351831	A	G	A	Sox2_MA0143.3	12	0	-	0	0	.
chr11	133621717	133621718	chr11:133621718:C:T	rs149333612	C	T	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr11	133658729	133658730	chr11:133658730:C:T	rs188468992	C	T	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr11	133812654	133812655	chr11:133812655:T:C	rs12797371	T	C	t	Sox2_MA0143.3	-14	0	-	0	0	.
chr11	133812655	133812656	chr11:133812656:A:G	rs12795650	A	G	A	Sox2_MA0143.3	-15	0	-	0	0	.
chr11	133900515	133900516	chr11:133900516:G:C	rs4936211	G	C	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr11	133922840	133922841	chr11:133922841:A:G	rs2027788	A	G	A	Sox2_MA0143.3	22	0	+	0	0	.
chr11	133933382	133933383	chr11:133933383:T:C	rs486560	T	C	T	Sox2_MA0143.3	-7	0	-	0	0	.
chr11	133945915	133945916	chr11:133945916:C:G	rs73596865	C	G	C	Sox2_MA0143.3	12	0	-	0	0	.
chr11	134027069	134027070	chr11:134027070:G:A	rs74380652	G	A	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr11	134120554	134120555	chr11:134120555:A:T	rs12275818	A	T	A	Sox2_MA0143.3	-10	0	+	0	0	.
chr11	134121383	134121384	chr11:134121384:C:T	rs116426391	C	T	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr11	134121409	134121410	chr11:134121410:G:A	rs470500	G	A	A	Sox2_MA0143.3	9	0	+	0	0	.
chr11	134121416	134121417	chr11:134121417:C:A	rs565475275	C	A	C	Sox2_MA0143.3	16	0	+	0	0	.
chr11	134125355	134125356	chr11:134125356:G:C	rs11223703	G	C	G	Sox2_MA0143.3	18	0	-	0	0	.
chr11	134230458	134230459	chr11:134230459:G:A	rs116894974	G	A	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr11	134267680	134267681	chr11:134267681:C:T	rs77813914	C	T	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr11	134397198	134397199	chr11:134397199:A:G	rs746431	A	G	G	Sox2_MA0143.3	6	1	-	8.676919043985553	1.7681642646703326	CCATTGTG
chr11	134433510	134433511	chr11:134433511:A:G	rs6590740	A	G	A	Sox2_MA0143.3	-11	0	-	0	0	.
chr11	134452367	134452368	chr11:134452368:C:T	rs73034335	C	T	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr11	134478026	134478027	chr11:134478027:G:A	rs4592433	G	A	A	Sox2_MA0143.3	-14	0	+	0	0	.
chr11	134478809	134478810	chr11:134478810:A:G	rs11819954	A	G	A	Sox2_MA0143.3	4	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr11	134478819	134478820	chr11:134478820:G:A	rs7938989	G	A	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr11	134478831	134478832	chr11:134478832:C:T	rs60829123	C	T	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr11	134529121	134529122	chr11:134529122:G:A	rs73036397	G	A	g	Sox2_MA0143.3	-20	0	-	0	0	.
chr11	134579884	134579885	chr11:134579885:A:C	rs58123928	A	C	A	Sox2_MA0143.3	10	0	-	0	0	.
chr11	134585034	134585035	chr11:134585035:A:G	rs575015294	A	G	A	Sox2_MA0143.3	4	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr11	134608865	134608866	chr11:134608866:C:T	rs67343751	C	T	T	Sox2_MA0143.3	-13	0	+	0	0	.
chr11	134615604	134615605	chr11:134615605:T:G	rs2000859	T	G	T	Sox2_MA0143.3	20	0	+	0	0	.
chr11	134700192	134700193	chr11:134700193:T:C	rs12224700	T	C	C	Sox2_MA0143.3	25	0	-	0	0	.
chr11	134745531	134745532	chr11:134745532:C:T	rs10791388	C	T	T	Sox2_MA0143.3	-13	0	-	0	0	.
chr11	134835751	134835752	chr11:134835752:A:G	rs2186715	A	G	A	Sox2_MA0143.3	9	0	+	0	0	.
chr11	134846514	134846515	chr11:134846515:T:C	rs2661977	T	C	C	Sox2_MA0143.3	2	1	+	3.5547341015215945	-2.751084876953981	CCTTTGTA
chr11	134851696	134851697	chr11:134851697:T:C	rs925182	T	C	c	Sox2_MA0143.3	10	0	-	0	0	.
chr11	134851915	134851916	chr11:134851916:G:C	rs200035368	G	C	-	Sox2_MA0143.3	16	0	-	0	0	.
chr11	134851990	134851991	chr11:134851991:G:C	rs112948942	G	C	-	Sox2_MA0143.3	16	0	-	0	0	.
chr11	134882270	134882271	chr11:134882271:C:A	rs79941362	C	A	C	Sox2_MA0143.3	24	0	+	0	0	.
chr11	134911729	134911730	chr11:134911730:G:A	rs2169860	G	A	G	Sox2_MA0143.3	1	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr11	134954776	134954777	chr11:134954777:C:T	rs10750585	C	T	T	Sox2_MA0143.3	7	1	+	9.019595766176417	9.613475778572903	CCATTGTC
chr11	134970499	134970500	chr11:134970500:A:T	rs116658034	A	T	a	Sox2_MA0143.3	-10	0	-	0	0	.
chr11	134971911	134971912	chr11:134971912:T:G	rs60227782	T	G	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr11	134974144	134974145	chr11:134974145:A:G	rs77209311	A	G	.	Sox2_MA0143.3	4	1	-	8.864090315184848	1.9553355358696274	CCTTTGTG
chr11	134974168	134974169	chr11:134974169:C:T	rs78801199	C	T	.	Sox2_MA0143.3	-20	0	-	0	0	.
chr11	134994644	134994645	chr11:134994645:A:G	chr11:134994645:A:G	A	G	.	Sox2_MA0143.3	-8	0	-	0	0	.
chr11	135020182	135020183	chr11:135020183:G:A	rs7926411	G	A	g	Sox2_MA0143.3	-9	0	-	0	0	.
chr11	135020187	135020188	chr11:135020188:T:G	rs7941197	T	G	g	Sox2_MA0143.3	-14	0	-	0	0	.
chr11	135029710	135029711	chr11:135029711:C:A	rs7944401	C	A	c	Sox2_MA0143.3	22	0	-	0	0	.
chr11	135070357	135070358	chr11:135070358:C:G	rs11604294	C	G	.	Sox2_MA0143.3	21	0	-	0	0	.
chr12	12232	12233	chr12:12233:G:A	rs369466006	G	A	.	Sox2_MA0143.3	-8	0	+	0	0	.
chr12	43424	43425	chr12:43425:G:A	rs868907973	G	A	.	Sox2_MA0143.3	-20	0	+	0	0	.
chr12	43434	43435	chr12:43435:G:T	rs371720756	G	T	.	Sox2_MA0143.3	-10	0	+	0	0	.
chr12	54049	54050	chr12:54050:C:T	rs901013837	C	T	.	Sox2_MA0143.3	20	0	+	0	0	.
chr12	82452	82453	chr12:82453:G:A	rs11063263	G	A	.	Sox2_MA0143.3	20	0	-	0	0	.
chr12	84144	84145	chr12:84145:G:A	rs77645327	G	A	.	Sox2_MA0143.3	-2	0	+	0	0	.
chr12	84150	84151	chr12:84151:T:C	rs116729883	T	C	.	Sox2_MA0143.3	4	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr12	116532	116533	chr12:116533:G:A	rs9668025	G	A	.	Sox2_MA0143.3	-16	0	-	0	0	.
chr12	146028	146029	chr12:146029:A:C	rs10848445	A	C	A	Sox2_MA0143.3	20	0	+	0	0	.
chr12	187854	187855	chr12:187855:C:T	rs112652074	C	T	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr12	196399	196400	chr12:196400:C:T	rs79352163	C	T	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr12	199796	199797	chr12:199797:T:C	rs186702321	T	C	T	Sox2_MA0143.3	3	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr12	220372	220373	chr12:220373:A:G	rs73038071	A	G	A	Sox2_MA0143.3	2	1	-	8.864090315184848	2.5582713367092715	CCTTTGTG
chr12	232274	232275	chr12:232275:G:T	chr12:232275:G:T	G	T	G	Sox2_MA0143.3	10	0	-	0	0	.
chr12	338330	338331	chr12:338331:T:A	rs7298019	T	A	T	Sox2_MA0143.3	-8	0	-	0	0	.
chr12	402207	402208	chr12:402208:T:C	rs78985787	T	C	T	Sox2_MA0143.3	11	0	-	0	0	.
chr12	473923	473924	chr12:473924:A:G	rs11063140	A	G	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr12	474094	474095	chr12:474095:G:A	rs77487524	G	A	G	Sox2_MA0143.3	-14	0	+	0	0	.
chr12	477561	477562	chr12:477562:G:A	rs577297515	G	A	G	Sox2_MA0143.3	18	0	+	0	0	.
chr12	510383	510384	chr12:510384:A:T	rs76158258	A	T	A	Sox2_MA0143.3	4	1	-	8.676919043985553	1.7681642646703322	CCATTGTG
chr12	523126	523127	chr12:523127:G:T	rs141978315	G	T	G	Sox2_MA0143.3	19	0	+	0	0	.
chr12	572472	572473	chr12:572473:G:T	rs12370021	G	T	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr12	576349	576350	chr12:576350:C:T	chr12:576350:C:T	C	T	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr12	602393	602394	chr12:602394:T:C	rs79700344	T	C	T	Sox2_MA0143.3	-4	0	+	0	0	.
chr12	614735	614736	chr12:614736:G:A	rs10774375	G	A	A	Sox2_MA0143.3	-19	0	-	0	0	.
chr12	647483	647484	chr12:647484:G:C	rs75805666	G	C	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr12	751552	751553	chr12:751553:C:T	rs184476540	C	T	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr12	751581	751582	chr12:751582:A:T	rs72647354	A	T	A	Sox2_MA0143.3	22	0	+	0	0	.
chr12	817554	817555	chr12:817555:A:C	rs61916747	A	C	A	Sox2_MA0143.3	-8	0	+	0	0	.
chr12	823870	823871	chr12:823871:A:C	rs6489750	A	C	C	Sox2_MA0143.3	-5	0	-	0	0	.
chr12	927968	927969	chr12:927969:G:A	rs11571436	G	A	g	Sox2_MA0143.3	19	0	+	0	0	.
chr12	1013753	1013754	chr12:1013754:G:A	rs114191687	G	A	G	Sox2_MA0143.3	-9	0	+	0	0	.
chr12	1162566	1162567	chr12:1162567:T:C	chr12:1162567:T:C	T	C	T	Sox2_MA0143.3	4	1	+	3.5547341015215945	-3.3540206777936254	CCTTTGTA
chr12	1188264	1188265	chr12:1188265:G:C	rs2968900	G	C	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr12	1293925	1293926	chr12:1293926:A:G	rs73029193	A	G	A	Sox2_MA0143.3	-6	0	-	0	0	.
chr12	1369403	1369404	chr12:1369404:G:A	rs11061714	G	A	A	Sox2_MA0143.3	-1	0	+	0	0	.
chr12	1482138	1482139	chr12:1482139:G:C	rs76853879	G	C	G	Sox2_MA0143.3	-3	0	+	0	0	.
chr12	1482215	1482216	chr12:1482216:G:A	rs73601949	G	A	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr12	1482239	1482240	chr12:1482240:G:A	rs10848484	G	A	G	Sox2_MA0143.3	5	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr12	1489255	1489256	chr12:1489256:G:T	rs1445571189	G	T	G	Sox2_MA0143.3	12	0	+	0	0	.
chr12	1500520	1500521	chr12:1500521:G:A	rs10848498	G	A	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr12	1500552	1500553	chr12:1500553:A:G	rs10848499	A	G	G	Sox2_MA0143.3	24	0	+	0	0	.
chr12	1607473	1607474	chr12:1607474:T:G	rs905781813	T	G	T	Sox2_MA0143.3	13	0	-	0	0	.
chr12	1733008	1733009	chr12:1733009:C:A	rs77296739	C	A	C	Sox2_MA0143.3	18	0	-	0	0	.
chr12	1747786	1747787	chr12:1747787:T:G	rs12230440	T	G	T	Sox2_MA0143.3	25	0	+	0	0	.
chr12	1830085	1830086	chr12:1830086:C:A	rs12301312	C	A	A	Sox2_MA0143.3	-7	0	+	0	0	.
chr12	1833585	1833586	chr12:1833586:T:C	rs7303599	T	C	C	Sox2_MA0143.3	10	0	+	0	0	.
chr12	1864217	1864218	chr12:1864218:C:T	rs2108639	C	T	T	Sox2_MA0143.3	-3	0	+	0	0	.
chr12	1915470	1915471	chr12:1915471:T:C	rs2887633	T	C	T	Sox2_MA0143.3	-7	0	-	0	0	.
chr12	1938046	1938047	chr12:1938047:T:C	rs2470406	T	C	T	Sox2_MA0143.3	-14	0	-	0	0	.
chr12	2068604	2068605	chr12:2068605:A:G	rs4765884	A	G	A	Sox2_MA0143.3	-18	0	+	0	0	.
chr12	2117532	2117533	chr12:2117533:A:C	rs10848617	A	C	C	Sox2_MA0143.3	6	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr12	2189881	2189882	chr12:2189882:C:T	rs2283288	C	T	C	Sox2_MA0143.3	15	0	-	0	0	.
chr12	2209340	2209341	chr12:2209341:G:A	rs562483195	G	A	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr12	2244869	2244870	chr12:2244870:A:G	rs78833529	A	G	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr12	2346948	2346949	chr12:2346949:G:T	rs2238070	G	T	G	Sox2_MA0143.3	5	1	+	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr12	2353634	2353635	chr12:2353635:T:G	rs11833358	T	G	G	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr12	2359130	2359131	chr12:2359131:A:G	rs2239057	A	G	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr12	2359151	2359152	chr12:2359152:T:C	rs2239058	T	C	C	Sox2_MA0143.3	20	0	+	0	0	.
chr12	2450831	2450832	chr12:2450832:G:A	rs4765685	G	A	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr12	2496590	2496591	chr12:2496591:A:G	rs12310992	A	G	A	Sox2_MA0143.3	-18	0	+	0	0	.
chr12	2616939	2616940	chr12:2616940:C:A	rs758562	C	A	C	Sox2_MA0143.3	25	0	-	0	0	.
chr12	2627384	2627385	chr12:2627385:A:G	rs12813847	A	G	A	Sox2_MA0143.3	21	0	+	0	0	.
chr12	2641407	2641408	chr12:2641408:G:A	rs74057307	G	A	G	Sox2_MA0143.3	22	0	+	0	0	.
chr12	2643353	2643354	chr12:2643354:T:G	rs10848678	T	G	G	Sox2_MA0143.3	26	0	+	0	0	.
chr12	2647828	2647829	chr12:2647829:C:A	rs216032	C	A	A	Sox2_MA0143.3	-12	0	-	0	0	.
chr12	2652359	2652360	chr12:2652360:G:A	rs73247415	G	A	A	Sox2_MA0143.3	24	0	+	0	0	.
chr12	2769954	2769955	chr12:2769955:A:G	rs73242845	A	G	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr12	2776962	2776963	chr12:2776963:C:T	rs4409904	C	T	C	Sox2_MA0143.3	22	0	-	0	0	.
chr12	2844917	2844918	chr12:2844918:T:C	rs7958378	T	C	C	Sox2_MA0143.3	2	1	-	9.019595766176417	2.900948058900136	CCATTGTC
chr12	2878407	2878408	chr12:2878408:A:G	rs1860434	A	G	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr12	3000880	3000881	chr12:3000881:C:T	rs11062450	C	T	C	Sox2_MA0143.3	22	0	-	0	0	.
chr12	3002464	3002465	chr12:3002465:C:T	rs143624606	C	T	C	Sox2_MA0143.3	18	0	-	0	0	.
chr12	3084730	3084731	chr12:3084731:G:A	rs10774112	G	A	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr12	3091309	3091310	chr12:3091310:A:G	rs12820322	A	G	G	Sox2_MA0143.3	14	0	-	0	0	.
chr12	3091327	3091328	chr12:3091328:C:T	rs12819603	C	T	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr12	3125970	3125971	chr12:3125971:C:A	rs7314280	C	A	C	Sox2_MA0143.3	18	0	+	0	0	.
chr12	3170968	3170969	chr12:3170969:C:T	rs922471954	C	T	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr12	3201168	3201169	chr12:3201169:C:T	rs740777	C	T	C	Sox2_MA0143.3	10	0	+	0	0	.
chr12	3202015	3202016	chr12:3202016:C:T	rs73047986	C	T	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr12	3247221	3247222	chr12:3247222:A:G	rs562127	A	G	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr12	3255528	3255529	chr12:3255529:C:T	rs1860385	C	T	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr12	3255569	3255570	chr12:3255570:C:T	rs76805954	C	T	C	Sox2_MA0143.3	25	0	+	0	0	.
chr12	3255906	3255907	chr12:3255907:G:A	rs614616	G	A	G	Sox2_MA0143.3	14	0	+	0	0	.
chr12	3258008	3258009	chr12:3258009:C:G	rs78917540	C	G	C	Sox2_MA0143.3	7	1	-	8.676919043985553	9.019595766176417	CCATTGTG
chr12	3278530	3278531	chr12:3278531:T:C	rs16930370	T	C	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr12	3295938	3295939	chr12:3295939:C:T	rs1006696	C	T	C	Sox2_MA0143.3	15	0	+	0	0	.
chr12	3342306	3342307	chr12:3342307:G:A	rs117132364	G	A	G	Sox2_MA0143.3	22	0	-	0	0	.
chr12	3527349	3527350	chr12:3527350:C:T	rs151024390	C	T	C	Sox2_MA0143.3	23	0	-	0	0	.
chr12	3557383	3557384	chr12:3557384:A:G	rs9668853	A	G	G	Sox2_MA0143.3	21	0	-	0	0	.
chr12	3570387	3570388	chr12:3570388:A:G	rs17769811	A	G	A	Sox2_MA0143.3	6	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr12	3580035	3580036	chr12:3580036:T:A	rs4765740	T	A	T	Sox2_MA0143.3	-13	0	+	0	0	.
chr12	3599529	3599530	chr12:3599530:G:T	rs11609678	G	T	T	Sox2_MA0143.3	-16	0	-	0	0	.
chr12	3600338	3600339	chr12:3600339:T:C	rs115622579	T	C	T	Sox2_MA0143.3	15	0	-	0	0	.
chr12	3616800	3616801	chr12:3616801:C:T	rs4766147	C	T	T	Sox2_MA0143.3	-3	0	-	0	0	.
chr12	3641528	3641529	chr12:3641529:G:A	rs74055946	G	A	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr12	3679362	3679363	chr12:3679363:T:C	rs11062760	T	C	T	Sox2_MA0143.3	12	0	+	0	0	.
chr12	3682477	3682478	chr12:3682478:T:C	rs56012913	T	C	T	Sox2_MA0143.3	-8	0	+	0	0	.
chr12	3731567	3731568	chr12:3731568:G:A	rs241965	G	A	G	Sox2_MA0143.3	-3	0	+	0	0	.
chr12	3874068	3874069	chr12:3874069:C:A	rs10774178	C	A	C	Sox2_MA0143.3	8	0	-	0	0	.
chr12	3883144	3883145	chr12:3883145:C:A	rs10774180	C	A	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr12	3884871	3884872	chr12:3884872:T:C	rs7297639	T	C	C	Sox2_MA0143.3	15	0	-	0	0	.
chr12	3884872	3884873	chr12:3884873:A:T	rs7294495	A	T	A	Sox2_MA0143.3	14	0	-	0	0	.
chr12	3966060	3966061	chr12:3966061:T:C	rs16930958	T	C	C	Sox2_MA0143.3	23	0	-	0	0	.
chr12	3968446	3968447	chr12:3968447:G:A	rs2159361	G	A	A	Sox2_MA0143.3	1	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr12	3972122	3972123	chr12:3972123:A:G	rs12815553	A	G	a	Sox2_MA0143.3	-11	0	+	0	0	.
chr12	3972128	3972129	chr12:3972129:G:A	rs35402862	G	A	G	Sox2_MA0143.3	-5	0	+	0	0	.
chr12	3972129	3972130	chr12:3972130:G:A	rs12813456	G	A	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr12	4052530	4052531	chr12:4052531:G:A	rs2724243	G	A	A	Sox2_MA0143.3	19	0	-	0	0	.
chr12	4147614	4147615	chr12:4147615:T:C	rs7137733	T	C	T	Sox2_MA0143.3	9	0	-	0	0	.
chr12	4194568	4194569	chr12:4194569:T:C	rs10849011	T	C	T	Sox2_MA0143.3	26	0	-	0	0	.
chr12	4194569	4194570	chr12:4194570:C:T	rs10849012	C	T	C	Sox2_MA0143.3	25	0	-	0	0	.
chr12	4250856	4250857	chr12:4250857:G:A	rs74058821	G	A	G	Sox2_MA0143.3	11	0	+	0	0	.
chr12	4286907	4286908	chr12:4286908:C:T	rs577131674	C	T	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr12	4415540	4415541	chr12:4415541:T:C	rs79917873	T	C	c	Sox2_MA0143.3	-13	0	+	0	0	.
chr12	4649621	4649622	chr12:4649622:A:G	rs2270134	A	G	A	Sox2_MA0143.3	-2	0	-	0	0	.
chr12	4766448	4766449	chr12:4766449:G:T	rs766506	G	T	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr12	4817447	4817448	chr12:4817448:T:A	rs765498	T	A	T	Sox2_MA0143.3	-4	0	+	0	0	.
chr12	4819684	4819685	chr12:4819685:C:T	rs1043080938	C	T	c	Sox2_MA0143.3	16	0	-	0	0	.
chr12	4912874	4912875	chr12:4912875:G:A	rs4766310	G	A	A	Sox2_MA0143.3	1	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr12	5210374	5210375	chr12:5210375:G:T	rs4765808	G	T	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr12	5305413	5305414	chr12:5305414:G:T	rs11063610	G	T	G	Sox2_MA0143.3	14	0	-	0	0	.
chr12	5329117	5329118	chr12:5329118:C:T	rs78520164	C	T	C	Sox2_MA0143.3	14	0	-	0	0	.
chr12	5374926	5374927	chr12:5374927:G:A	rs11063637	G	A	G	Sox2_MA0143.3	9	0	+	0	0	.
chr12	5441690	5441691	chr12:5441691:A:C	chr12:5441691:A:C	A	C	A	Sox2_MA0143.3	-5	0	+	0	0	.
chr12	5441692	5441693	chr12:5441693:C:A	rs76329779	C	A	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr12	5441719	5441720	chr12:5441720:C:T	rs7312789	C	T	T	Sox2_MA0143.3	24	0	+	0	0	.
chr12	5442376	5442377	chr12:5442377:T:G	rs74056353	T	G	T	Sox2_MA0143.3	25	0	+	0	0	.
chr12	5457978	5457979	chr12:5457979:T:C	rs11063688	T	C	C	Sox2_MA0143.3	4	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr12	5457979	5457980	chr12:5457980:G:A	rs11063689	G	A	G	Sox2_MA0143.3	5	1	+	9.019595766176417	2.110840986861197	CCATTGTC
chr12	5513657	5513658	chr12:5513658:T:C	rs74768663	T	C	T	Sox2_MA0143.3	-4	0	-	0	0	.
chr12	5587779	5587780	chr12:5587780:C:T	rs182614469	C	T	C	Sox2_MA0143.3	17	0	+	0	0	.
chr12	5637433	5637434	chr12:5637434:G:A	rs9943783	G	A	G	Sox2_MA0143.3	5	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr12	5665394	5665395	chr12:5665395:C:T	rs251776	C	T	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr12	5666080	5666081	chr12:5666081:C:T	rs2361589	C	T	T	Sox2_MA0143.3	-12	0	-	0	0	.
chr12	5882755	5882756	chr12:5882756:T:G	rs34584056	T	G	T	Sox2_MA0143.3	8	0	+	0	0	.
chr12	5962844	5962845	chr12:5962845:G:A	rs10849364	G	A	A	Sox2_MA0143.3	25	0	-	0	0	.
chr12	6025820	6025821	chr12:6025821:C:A	rs56068059	C	A	C	Sox2_MA0143.3	21	0	-	0	0	.
chr12	6039388	6039389	chr12:6039389:A:G	rs11614912	A	G	A	Sox2_MA0143.3	23	0	+	0	0	.
chr12	6072468	6072469	chr12:6072469:G:A	rs55907031	G	A	G	Sox2_MA0143.3	0	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr12	6072486	6072487	chr12:6072487:C:T	rs185148953	C	T	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr12	6089556	6089557	chr12:6089557:C:T	rs2109119	C	T	C	Sox2_MA0143.3	1	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr12	6092027	6092028	chr12:6092028:A:G	rs2239139	A	G	a	Sox2_MA0143.3	14	0	-	0	0	.
chr12	6116915	6116916	chr12:6116916:A:G	rs74407311	A	G	A	Sox2_MA0143.3	-15	0	-	0	0	.
chr12	6184388	6184389	chr12:6184389:C:T	rs12302533	C	T	C	Sox2_MA0143.3	16	0	+	0	0	.
chr12	6187889	6187890	chr12:6187890:C:T	rs7295083	C	T	C	Sox2_MA0143.3	25	0	-	0	0	.
chr12	6197921	6197922	chr12:6197922:C:T	rs150649902	C	T	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr12	6222175	6222176	chr12:6222176:G:A	rs117868098	G	A	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr12	6229470	6229471	chr12:6229471:C:T	rs740839	C	T	T	Sox2_MA0143.3	-18	0	+	0	0	.
chr12	6229499	6229500	chr12:6229500:C:G	rs11568255	C	G	C	Sox2_MA0143.3	11	0	+	0	0	.
chr12	6236032	6236033	chr12:6236033:C:T	rs3181300	C	T	C	Sox2_MA0143.3	15	0	+	0	0	.
chr12	6292137	6292138	chr12:6292138:A:C	rs61918206	A	C	A	Sox2_MA0143.3	27	0	+	0	0	.
chr12	6324025	6324026	chr12:6324026:T:C	rs74059206	T	C	C	Sox2_MA0143.3	11	0	-	0	0	.
chr12	6324035	6324036	chr12:6324036:G:T	rs3782719	G	T	G	Sox2_MA0143.3	1	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr12	6339948	6339949	chr12:6339949:C:T	rs4149576	C	T	C	Sox2_MA0143.3	17	0	+	0	0	.
chr12	6341778	6341779	chr12:6341779:T:C	rs767455	T	C	T	Sox2_MA0143.3	22	0	+	0	0	.
chr12	6381149	6381150	chr12:6381150:A:C	rs11831244	A	C	C	Sox2_MA0143.3	6	1	-	9.019595766176417	2.110840986861197	CCATTGTC
chr12	6393575	6393576	chr12:6393576:G:A	rs11616188	G	A	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr12	6434972	6434973	chr12:6434973:G:T	rs60237390	G	T	g	Sox2_MA0143.3	1	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr12	6444693	6444694	chr12:6444694:A:G	rs3136551	A	G	G	Sox2_MA0143.3	9	0	+	0	0	.
chr12	6461654	6461655	chr12:6461655:T:G	rs2534711	T	G	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr12	6464582	6464583	chr12:6464583:C:T	rs2534717	C	T	T	Sox2_MA0143.3	-2	0	+	0	0	.
chr12	6495938	6495939	chr12:6495939:C:A	rs7960757	C	A	A	Sox2_MA0143.3	1	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr12	6526400	6526401	chr12:6526401:A:T	rs7311174	A	T	T	Sox2_MA0143.3	-7	0	+	0	0	.
chr12	6544595	6544596	chr12:6544596:G:A	rs10849487	G	A	G	Sox2_MA0143.3	18	0	-	0	0	.
chr12	6569385	6569386	chr12:6569386:C:T	rs7979239	C	T	C	Sox2_MA0143.3	1	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr12	6632649	6632650	chr12:6632650:T:C	rs4376959	T	C	T	Sox2_MA0143.3	-7	0	+	0	0	.
chr12	6754038	6754039	chr12:6754039:C:A	rs61580221	C	A	C	Sox2_MA0143.3	-12	0	-	0	0	.
chr12	6869380	6869381	chr12:6869381:G:T	rs150585849	G	T	G	Sox2_MA0143.3	0	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr12	6923492	6923493	chr12:6923493:G:A	rs148043196	G	A	G	Sox2_MA0143.3	9	0	+	0	0	.
chr12	6925995	6925996	chr12:6925996:T:G	chr12:6925996:T:G	T	G	T	Sox2_MA0143.3	-5	0	+	0	0	.
chr12	6960456	6960457	chr12:6960457:T:C	rs759052	T	C	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr12	6960490	6960491	chr12:6960491:G:A	rs759053	G	A	G	Sox2_MA0143.3	19	0	+	0	0	.
chr12	6962512	6962513	chr12:6962513:C:G	rs77787701	C	G	C	Sox2_MA0143.3	15	0	-	0	0	.
chr12	7049175	7049176	chr12:7049176:T:C	rs7398633	T	C	T	Sox2_MA0143.3	8	0	+	0	0	.
chr12	7090353	7090354	chr12:7090354:A:G	rs4332595	A	G	A	Sox2_MA0143.3	6	1	-	8.676919043985553	1.7681642646703326	CCATTGTG
chr12	7090356	7090357	chr12:7090357:A:G	rs4505141	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr12	7103683	7103684	chr12:7103684:C:T	rs6487298	C	T	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr12	7190087	7190088	chr12:7190088:G:A	rs542096066	G	A	G	Sox2_MA0143.3	10	0	+	0	0	.
chr12	7263076	7263077	chr12:7263077:T:C	rs2198061	T	C	C	Sox2_MA0143.3	23	0	-	0	0	.
chr12	7640477	7640478	chr12:7640478:T:A	rs572779565	T	A	T	Sox2_MA0143.3	12	0	+	0	0	.
chr12	7758366	7758367	chr12:7758367:G:T	rs78224908	G	T	T	Sox2_MA0143.3	19	0	+	0	0	.
chr12	8077392	8077393	chr12:8077393:G:C	rs767119	G	C	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr12	8162614	8162615	chr12:8162615:T:C	rs7299681	T	C	.	Sox2_MA0143.3	-1	0	+	0	0	.
chr12	8162617	8162618	chr12:8162618:T:C	rs7299683	T	C	.	Sox2_MA0143.3	2	1	+	9.206767037375712	2.900948058900136	CCTTTGTC
chr12	8236059	8236060	chr12:8236060:G:A	rs2953202	G	A	.	Sox2_MA0143.3	-15	0	+	0	0	.
chr12	8272148	8272149	chr12:8272149:G:C	rs17729229	G	C	g	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr12	8391933	8391934	chr12:8391934:C:T	rs201964319	C	T	.	Sox2_MA0143.3	-6	0	-	0	0	.
chr12	8398048	8398049	chr12:8398049:G:A	rs750370567	G	A	.	Sox2_MA0143.3	22	0	-	0	0	.
chr12	8675896	8675897	chr12:8675897:C:A	rs56247214	C	A	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr12	8697162	8697163	chr12:8697163:C:G	rs1048852995	C	G	C	Sox2_MA0143.3	-20	0	-	0	0	.
chr12	8890755	8890756	chr12:8890756:G:T	rs10771167	G	T	G	Sox2_MA0143.3	19	0	-	0	0	.
chr12	8890759	8890760	chr12:8890760:G:T	rs11047839	G	T	G	Sox2_MA0143.3	15	0	-	0	0	.
chr12	9025955	9025956	chr12:9025956:G:A	rs35377225	G	A	G	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr12	9075271	9075272	chr12:9075272:T:A	rs1805681	T	A	T	Sox2_MA0143.3	-8	0	-	0	0	.
chr12	9121797	9121798	chr12:9121798:C:T	rs7302725	C	T	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr12	9224052	9224053	chr12:9224053:C:T	rs2217228	C	T	c	Sox2_MA0143.3	26	0	+	0	0	.
chr12	9253692	9253693	chr12:9253693:C:G	rs7974378	C	G	G	Sox2_MA0143.3	-16	0	-	0	0	.
chr12	9320046	9320047	chr12:9320047:G:A	rs4271437	G	A	g	Sox2_MA0143.3	22	0	-	0	0	.
chr12	9331784	9331785	chr12:9331785:C:T	rs11050267	C	T	c	Sox2_MA0143.3	-9	0	-	0	0	.
chr12	9333128	9333129	chr12:9333129:G:A	rs7959473	G	A	g	Sox2_MA0143.3	-4	0	-	0	0	.
chr12	9364448	9364449	chr12:9364449:G:A	rs12296616	G	A	g	Sox2_MA0143.3	-18	0	+	0	0	.
chr12	9390972	9390973	chr12:9390973:G:A	rs7138857	G	A	-	Sox2_MA0143.3	-9	0	+	0	0	.
chr12	9415757	9415758	chr12:9415758:A:C	rs61916768	A	C	.	Sox2_MA0143.3	-13	0	+	0	0	.
chr12	9433994	9433995	chr12:9433995:G:C	rs61914695	G	C	G	Sox2_MA0143.3	13	0	+	0	0	.
chr12	9471645	9471646	chr12:9471646:A:C	rs10843860	A	C	.	Sox2_MA0143.3	-6	0	-	0	0	.
chr12	9642949	9642950	chr12:9642950:C:G	rs538158876	C	G	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr12	9660582	9660583	chr12:9660583:C:A	rs7311421	C	A	C	Sox2_MA0143.3	20	0	+	0	0	.
chr12	9717685	9717686	chr12:9717686:T:C	rs10772074	T	C	C	Sox2_MA0143.3	23	0	+	0	0	.
chr12	9732209	9732210	chr12:9732210:C:T	rs10161013	C	T	C	Sox2_MA0143.3	5	1	-	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr12	9752082	9752083	chr12:9752083:A:C	rs2401398	A	C	A	Sox2_MA0143.3	-14	0	-	0	0	.
chr12	9819126	9819127	chr12:9819127:A:C	rs10844866	A	C	C	Sox2_MA0143.3	4	1	-	8.864090315184848	1.9553355358696274	CCTTTGTG
chr12	10026887	10026888	chr12:10026888:T:A	rs7300492	T	A	A	Sox2_MA0143.3	19	0	-	0	0	.
chr12	10093805	10093806	chr12:10093806:C:G	rs7962246	C	G	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr12	10093831	10093832	chr12:10093832:C:T	rs7962341	C	T	T	Sox2_MA0143.3	22	0	+	0	0	.
chr12	10101643	10101644	chr12:10101644:C:T	rs11053585	C	T	T	Sox2_MA0143.3	-2	0	-	0	0	.
chr12	10215665	10215666	chr12:10215666:A:T	rs11833542	A	T	T	Sox2_MA0143.3	-9	0	+	0	0	.
chr12	10227831	10227832	chr12:10227832:T:G	rs7966224	T	G	T	Sox2_MA0143.3	-9	0	+	0	0	.
chr12	10249890	10249891	chr12:10249891:C:G	rs1382266	C	G	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr12	10272610	10272611	chr12:10272611:G:A	rs4764369	G	A	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr12	10285510	10285511	chr12:10285511:T:C	rs74060304	T	C	T	Sox2_MA0143.3	-12	0	+	0	0	.
chr12	10331657	10331658	chr12:10331658:T:G	rs2617154	T	G	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr12	10364071	10364072	chr12:10364072:T:C	rs894392307	T	C	T	Sox2_MA0143.3	11	0	-	0	0	.
chr12	10365500	10365501	chr12:10365501:T:G	rs7310643	T	G	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr12	10618435	10618436	chr12:10618436:T:C	rs114958528	T	C	T	Sox2_MA0143.3	-8	0	-	0	0	.
chr12	10618439	10618440	chr12:10618440:A:G	rs10845185	A	G	A	Sox2_MA0143.3	-12	0	-	0	0	.
chr12	10636569	10636570	chr12:10636570:A:G	rs3782672	A	G	A	Sox2_MA0143.3	24	0	-	0	0	.
chr12	10830298	10830299	chr12:10830299:C:G	rs10772365	C	G	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr12	10942315	10942316	chr12:10942316:G:T	chr12:10942316:G:T	G	T	G	Sox2_MA0143.3	20	0	+	0	0	.
chr12	10983054	10983055	chr12:10983055:G:A	rs78400021	G	A	G	Sox2_MA0143.3	-9	0	+	0	0	.
chr12	11017175	11017176	chr12:11017176:G:A	rs73047121	G	A	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr12	11071016	11071017	chr12:11071017:C:T	rs73045543	C	T	c	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr12	11071506	11071507	chr12:11071507:G:T	rs1839569	G	T	g	Sox2_MA0143.3	-7	0	-	0	0	.
chr12	11202415	11202416	chr12:11202416:T:C	rs1304839	T	C	T	Sox2_MA0143.3	6	1	+	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr12	11228656	11228657	chr12:11228657:C:A	rs1249034947	C	A	C	Sox2_MA0143.3	11	0	-	0	0	.
chr12	11344919	11344920	chr12:11344920:T:C	rs7977399	T	C	C	Sox2_MA0143.3	14	0	+	0	0	.
chr12	11458356	11458357	chr12:11458357:G:T	rs2416781	G	T	G	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr12	11483303	11483304	chr12:11483304:G:A	rs115117843	G	A	G	Sox2_MA0143.3	-12	0	+	0	0	.
chr12	11554296	11554297	chr12:11554297:C:T	rs7975331	C	T	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr12	11649189	11649190	chr12:11649190:G:A	rs932221793	G	A	G	Sox2_MA0143.3	1	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr12	11661912	11661913	chr12:11661913:A:G	rs34826165	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr12	11729913	11729914	chr12:11729914:A:C	rs147781712	A	C	a	Sox2_MA0143.3	25	0	-	0	0	.
chr12	11730272	11730273	chr12:11730273:G:T	rs77392136	G	T	G	Sox2_MA0143.3	26	0	+	0	0	.
chr12	11758492	11758493	chr12:11758493:A:G	rs114327160	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr12	11789487	11789488	chr12:11789488:C:A	rs17210671	C	A	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr12	11855965	11855966	chr12:11855966:G:T	rs80046954	G	T	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr12	11973659	11973660	chr12:11973660:C:T	rs10845433	C	T	T	Sox2_MA0143.3	-5	0	+	0	0	.
chr12	12011344	12011345	chr12:12011345:T:G	rs111289803	T	G	T	Sox2_MA0143.3	-18	0	+	0	0	.
chr12	12022512	12022513	chr12:12022513:T:C	rs11614162	T	C	T	Sox2_MA0143.3	-16	0	-	0	0	.
chr12	12022616	12022617	chr12:12022617:A:G	rs11613729	A	G	G	Sox2_MA0143.3	12	0	-	0	0	.
chr12	12057182	12057183	chr12:12057183:C:T	rs10845465	C	T	C	Sox2_MA0143.3	17	0	-	0	0	.
chr12	12057187	12057188	chr12:12057188:C:T	rs10845466	C	T	T	Sox2_MA0143.3	12	0	-	0	0	.
chr12	12239424	12239425	chr12:12239425:C:T	rs7134001	C	T	T	Sox2_MA0143.3	-9	0	-	0	0	.
chr12	12284014	12284015	chr12:12284015:G:A	rs10772546	G	A	G	Sox2_MA0143.3	1	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr12	12333560	12333561	chr12:12333561:G:C	rs777229846	G	C	G	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr12	12343051	12343052	chr12:12343052:A:G	rs189054747	A	G	A	Sox2_MA0143.3	16	0	-	0	0	.
chr12	12351249	12351250	chr12:12351250:A:G	rs35190429	A	G	A	Sox2_MA0143.3	17	0	-	0	0	.
chr12	12380559	12380560	chr12:12380560:T:C	rs11054864	T	C	t	Sox2_MA0143.3	-19	0	+	0	0	.
chr12	12417206	12417207	chr12:12417207:T:A	rs10845533	T	A	A	Sox2_MA0143.3	8	0	+	0	0	.
chr12	12425505	12425506	chr12:12425506:C:T	rs10845538	C	T	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr12	12502508	12502509	chr12:12502509:C:T	rs7972902	C	T	T	Sox2_MA0143.3	11	0	+	0	0	.
chr12	12564287	12564288	chr12:12564288:A:G	rs7301308	A	G	A	Sox2_MA0143.3	-3	0	+	0	0	.
chr12	12695900	12695901	chr12:12695901:G:A	rs77818894	G	A	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr12	12718747	12718748	chr12:12718748:T:C	rs3093731	T	C	T	Sox2_MA0143.3	-19	0	+	0	0	.
chr12	12758600	12758601	chr12:12758601:A:G	rs73283160	A	G	a	Sox2_MA0143.3	-13	0	-	0	0	.
chr12	12819897	12819898	chr12:12819898:A:G	rs145022535	A	G	A	Sox2_MA0143.3	-14	0	+	0	0	.
chr12	12881648	12881649	chr12:12881649:A:T	rs112613507	A	T	A	Sox2_MA0143.3	21	0	+	0	0	.
chr12	12881650	12881651	chr12:12881651:T:C	rs11615974	T	C	T	Sox2_MA0143.3	23	0	+	0	0	.
chr12	12938721	12938722	chr12:12938722:C:A	rs1291349	C	A	C	Sox2_MA0143.3	23	0	-	0	0	.
chr12	12999463	12999464	chr12:12999464:A:G	rs137912570	A	G	A	Sox2_MA0143.3	19	0	-	0	0	.
chr12	13041480	13041481	chr12:13041481:G:A	rs553312796	G	A	g	Sox2_MA0143.3	18	0	-	0	0	.
chr12	13050182	13050183	chr12:13050183:T:C	rs7956640	T	C	C	Sox2_MA0143.3	24	0	+	0	0	.
chr12	13051341	13051342	chr12:13051342:C:G	rs950671	C	G	C	Sox2_MA0143.3	5	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr12	13117569	13117570	chr12:13117570:C:T	rs11055247	C	T	C	Sox2_MA0143.3	18	0	+	0	0	.
chr12	13173926	13173927	chr12:13173927:T:C	rs4519177	T	C	T	Sox2_MA0143.3	-14	0	+	0	0	.
chr12	13238356	13238357	chr12:13238357:G:A	rs3925523	G	A	A	Sox2_MA0143.3	-2	0	-	0	0	.
chr12	13252253	13252254	chr12:13252254:A:G	rs10845725	A	G	A	Sox2_MA0143.3	7	1	+	3.5547341015215945	8.864090315184848	CCTTTGTA
chr12	13255972	13255973	chr12:13255973:G:C	rs116126238	G	C	G	Sox2_MA0143.3	9	0	-	0	0	.
chr12	13255973	13255974	chr12:13255974:G:A	rs542007972	G	A	G	Sox2_MA0143.3	8	0	-	0	0	.
chr12	13386974	13386975	chr12:13386975:T:A	rs12827919	T	A	A	Sox2_MA0143.3	18	0	-	0	0	.
chr12	13387006	13387007	chr12:13387007:C:G	rs12822220	C	G	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr12	13387153	13387154	chr12:13387154:T:C	rs12809457	T	C	C	Sox2_MA0143.3	25	0	+	0	0	.
chr12	13427837	13427838	chr12:13427838:T:C	rs11614237	T	C	T	Sox2_MA0143.3	-20	0	-	0	0	.
chr12	13539096	13539097	chr12:13539097:C:G	rs12580557	C	G	c	Sox2_MA0143.3	24	0	-	0	0	.
chr12	13544882	13544883	chr12:13544883:G:C	rs11055517	G	C	C	Sox2_MA0143.3	18	0	+	0	0	.
chr12	13566637	13566638	chr12:13566638:T:G	rs1806192	T	G	T	Sox2_MA0143.3	25	0	+	0	0	.
chr12	13571231	13571232	chr12:13571232:G:A	rs202076051	G	A	G	Sox2_MA0143.3	21	0	-	0	0	.
chr12	13592251	13592252	chr12:13592252:A:G	rs888149	A	G	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr12	13629949	13629950	chr12:13629950:T:C	rs11055553	T	C	T	Sox2_MA0143.3	4	1	+	3.5547341015215945	-3.3540206777936254	CCTTTGTA
chr12	13786906	13786907	chr12:13786907:C:T	rs11055616	C	T	C	Sox2_MA0143.3	22	0	-	0	0	.
chr12	13852160	13852161	chr12:13852161:C:A	rs2193513	C	A	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr12	13960780	13960781	chr12:13960781:G:A	rs219934	G	A	g	Sox2_MA0143.3	19	0	-	0	0	.
chr12	13961854	13961855	chr12:13961855:C:T	rs61912019	C	T	C	Sox2_MA0143.3	25	0	-	0	0	.
chr12	13961867	13961868	chr12:13961868:T:C	rs17221245	T	C	C	Sox2_MA0143.3	12	0	-	0	0	.
chr12	14127425	14127426	chr12:14127426:T:C	rs61536930	T	C	T	Sox2_MA0143.3	9	0	+	0	0	.
chr12	14245487	14245488	chr12:14245488:C:T	rs12099580	C	T	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr12	14251346	14251347	chr12:14251347:G:A	rs10772757	G	A	A	Sox2_MA0143.3	-15	0	+	0	0	.
chr12	14261258	14261259	chr12:14261259:A:G	rs189586808	A	G	A	Sox2_MA0143.3	24	0	+	0	0	.
chr12	14373445	14373446	chr12:14373446:A:G	rs114215108	A	G	A	Sox2_MA0143.3	3	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr12	14410372	14410373	chr12:14410373:C:T	rs34834211	C	T	C	Sox2_MA0143.3	17	0	+	0	0	.
chr12	14844511	14844512	chr12:14844512:G:A	rs3887182	G	A	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr12	14937657	14937658	chr12:14937658:A:G	rs3748295	A	G	a	Sox2_MA0143.3	-10	0	-	0	0	.
chr12	15117230	15117231	chr12:15117231:C:G	rs11056358	C	G	G	Sox2_MA0143.3	5	1	-	8.676919043985553	1.7681642646703324	CCATTGTG
chr12	15169733	15169734	chr12:15169734:T:C	rs7961224	T	C	T	Sox2_MA0143.3	-20	0	-	0	0	.
chr12	15179845	15179846	chr12:15179846:C:T	rs36039131	C	T	C	Sox2_MA0143.3	10	0	-	0	0	.
chr12	15515128	15515129	chr12:15515129:C:T	rs1861598	C	T	T	Sox2_MA0143.3	-8	0	+	0	0	.
chr12	15676548	15676549	chr12:15676549:C:A	rs4480592	C	A	C	Sox2_MA0143.3	7	1	+	9.206767037375712	3.5547341015215945	CCTTTGTC
chr12	15978007	15978008	chr12:15978008:C:T	rs1450966	C	T	c	Sox2_MA0143.3	-4	0	+	0	0	.
chr12	16070212	16070213	chr12:16070213:C:T	rs1026405	C	T	G	Sox2_MA0143.3	25	0	-	0	0	.
chr12	16118585	16118586	chr12:16118586:G:A	rs1526980	G	A	A	Sox2_MA0143.3	-17	0	+	0	0	.
chr12	16118758	16118759	chr12:16118759:T:A	rs183985618	T	A	T	Sox2_MA0143.3	-12	0	+	0	0	.
chr12	16198395	16198396	chr12:16198396:C:T	rs3843666	C	T	C	Sox2_MA0143.3	22	0	-	0	0	.
chr12	16225907	16225908	chr12:16225908:C:T	rs1405519	C	T	C	Sox2_MA0143.3	5	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr12	16329605	16329606	chr12:16329606:A:G	rs34685194	A	G	A	Sox2_MA0143.3	9	0	+	0	0	.
chr12	16345162	16345163	chr12:16345163:A:G	rs10846332	A	G	a	Sox2_MA0143.3	14	0	-	0	0	.
chr12	16359193	16359194	chr12:16359194:G:A	rs4149195	G	A	A	Sox2_MA0143.3	-9	0	-	0	0	.
chr12	16386682	16386683	chr12:16386683:A:T	rs7960412	A	T	A	Sox2_MA0143.3	-18	0	+	0	0	.
chr12	16475078	16475079	chr12:16475079:G:T	rs34389	G	T	T	Sox2_MA0143.3	10	0	-	0	0	.
chr12	16514187	16514188	chr12:16514188:C:T	rs533839562	C	T	C	Sox2_MA0143.3	0	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr12	16531886	16531887	chr12:16531887:G:A	rs10161264	G	A	G	Sox2_MA0143.3	-14	0	+	0	0	.
chr12	16599111	16599112	chr12:16599112:C:T	rs553746501	C	T	C	Sox2_MA0143.3	5	1	-	8.676919043985553	1.7681642646703324	CCATTGTG
chr12	16940131	16940132	chr12:16940132:A:G	rs749214056	A	G	A	Sox2_MA0143.3	21	0	+	0	0	.
chr12	17059946	17059947	chr12:17059947:G:A	rs10744146	G	A	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr12	17208254	17208255	chr12:17208255:C:T	rs79554352	C	T	C	Sox2_MA0143.3	20	0	+	0	0	.
chr12	17438131	17438132	chr12:17438132:A:T	rs1163945	A	T	T	Sox2_MA0143.3	-14	0	+	0	0	.
chr12	17478162	17478163	chr12:17478163:C:T	rs12813692	C	T	c	Sox2_MA0143.3	-14	0	+	0	0	.
chr12	17589132	17589133	chr12:17589133:C:G	rs1183666	C	G	C	Sox2_MA0143.3	14	0	-	0	0	.
chr12	17589151	17589152	chr12:17589152:A:G	rs73339934	A	G	A	Sox2_MA0143.3	-5	0	-	0	0	.
chr12	17619194	17619195	chr12:17619195:C:T	rs1370226	C	T	T	Sox2_MA0143.3	-8	0	-	0	0	.
chr12	17930127	17930128	chr12:17930128:C:A	rs10734675	C	A	A	Sox2_MA0143.3	26	0	+	0	0	.
chr12	18072524	18072525	chr12:18072525:G:A	rs11043832	G	A	A	Sox2_MA0143.3	-8	0	-	0	0	.
chr12	18258077	18258078	chr12:18258078:C:A	rs146536804	C	A	C	Sox2_MA0143.3	14	0	-	0	0	.
chr12	18264557	18264558	chr12:18264558:T:C	rs11043985	T	C	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr12	18484227	18484228	chr12:18484228:T:C	rs1374670	T	C	T	Sox2_MA0143.3	-9	0	-	0	0	.
chr12	18602458	18602459	chr12:18602459:T:C	rs12823518	T	C	t	Sox2_MA0143.3	8	0	-	0	0	.
chr12	18651252	18651253	chr12:18651253:G:C	rs10734679	G	C	C	Sox2_MA0143.3	22	0	+	0	0	.
chr12	18688180	18688181	chr12:18688181:G:A	rs10505830	G	A	G	Sox2_MA0143.3	12	0	+	0	0	.
chr12	18753568	18753569	chr12:18753569:C:A	rs114608398	C	A	C	Sox2_MA0143.3	0	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr12	18783004	18783005	chr12:18783005:G:C	rs79079876	G	C	G	Sox2_MA0143.3	13	0	-	0	0	.
chr12	18920338	18920339	chr12:18920339:T:C	rs569316113	T	C	T	Sox2_MA0143.3	-10	0	+	0	0	.
chr12	18943273	18943274	chr12:18943274:C:T	rs4763513	C	T	C	Sox2_MA0143.3	19	0	+	0	0	.
chr12	19018472	19018473	chr12:19018473:T:G	rs56031230	T	G	T	Sox2_MA0143.3	10	0	+	0	0	.
chr12	19030309	19030310	chr12:19030310:G:A	rs780429051	G	A	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr12	19036531	19036532	chr12:19036532:G:T	rs16915284	G	T	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr12	19037604	19037605	chr12:19037605:A:G	rs873408	A	G	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr12	19191992	19191993	chr12:19191993:G:T	rs12818330	G	T	G	Sox2_MA0143.3	12	0	-	0	0	.
chr12	19198657	19198658	chr12:19198658:T:A	rs78468792	T	A	T	Sox2_MA0143.3	18	0	-	0	0	.
chr12	19299367	19299368	chr12:19299368:A:T	rs704160	A	T	A	Sox2_MA0143.3	-9	0	-	0	0	.
chr12	19394478	19394479	chr12:19394479:A:T	rs74064467	A	T	A	Sox2_MA0143.3	-15	0	+	0	0	.
chr12	19394501	19394502	chr12:19394502:C:T	rs57017190	C	T	T	Sox2_MA0143.3	8	0	+	0	0	.
chr12	19540081	19540082	chr12:19540082:A:G	rs16915601	A	G	A	Sox2_MA0143.3	-16	0	+	0	0	.
chr12	19549130	19549131	chr12:19549131:C:T	rs57804110	C	T	T	Sox2_MA0143.3	-19	0	+	0	0	.
chr12	19549164	19549165	chr12:19549165:A:T	rs61919024	A	T	T	Sox2_MA0143.3	15	0	+	0	0	.
chr12	19659781	19659782	chr12:19659782:T:C	rs75208791	T	C	T	Sox2_MA0143.3	-18	0	+	0	0	.
chr12	19778014	19778015	chr12:19778015:C:T	rs2177985	C	T	C	Sox2_MA0143.3	0	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr12	19938166	19938167	chr12:19938167:C:A	rs4762903	C	A	A	Sox2_MA0143.3	-19	0	-	0	0	.
chr12	20125331	20125332	chr12:20125332:T:C	rs7964046	T	C	C	Sox2_MA0143.3	27	0	+	0	0	.
chr12	20194468	20194469	chr12:20194469:C:T	rs7307541	C	T	C	Sox2_MA0143.3	19	0	+	0	0	.
chr12	20212305	20212306	chr12:20212306:G:A	rs138584595	G	A	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr12	20212756	20212757	chr12:20212757:A:T	rs77805805	A	T	A	Sox2_MA0143.3	16	0	-	0	0	.
chr12	20235232	20235233	chr12:20235233:A:G	rs274989	A	G	G	Sox2_MA0143.3	23	0	+	0	0	.
chr12	20264546	20264547	chr12:20264547:C:A	rs4762941	C	A	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr12	20305289	20305290	chr12:20305290:A:G	rs11045157	A	G	A	Sox2_MA0143.3	-4	0	+	0	0	.
chr12	20373691	20373692	chr12:20373692:G:A	rs10743366	G	A	A	Sox2_MA0143.3	-16	0	-	0	0	.
chr12	20447377	20447378	chr12:20447378:A:G	rs7962446	A	G	A	Sox2_MA0143.3	7	1	+	3.5547341015215945	8.864090315184848	CCTTTGTA
chr12	20731003	20731004	chr12:20731004:G:A	rs12296191	G	A	A	Sox2_MA0143.3	-15	0	-	0	0	.
chr12	20822473	20822474	chr12:20822474:A:G	rs61921619	A	G	a	Sox2_MA0143.3	9	0	-	0	0	.
chr12	21233908	21233909	chr12:21233909:T:C	rs11513225	T	C	T	Sox2_MA0143.3	-4	0	-	0	0	.
chr12	21305725	21305726	chr12:21305726:T:C	rs11838023	T	C	T	Sox2_MA0143.3	-7	0	+	0	0	.
chr12	21395140	21395141	chr12:21395141:A:G	rs10841804	A	G	A	Sox2_MA0143.3	4	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr12	21416795	21416796	chr12:21416796:A:G	rs10770806	A	G	G	Sox2_MA0143.3	15	0	-	0	0	.
chr12	21528884	21528885	chr12:21528885:A:G	rs2306178	A	G	A	Sox2_MA0143.3	9	0	+	0	0	.
chr12	21563120	21563121	chr12:21563121:A:C	rs1473422	A	C	A	Sox2_MA0143.3	3	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr12	21642837	21642838	chr12:21642838:A:T	rs114899517	A	T	A	Sox2_MA0143.3	-3	0	-	0	0	.
chr12	21657899	21657900	chr12:21657900:G:A	rs138560021	G	A	G	Sox2_MA0143.3	7	1	+	8.676919043985553	3.3675628303222993	CCATTGTG
chr12	21657911	21657912	chr12:21657912:G:C	rs186949375	G	C	G	Sox2_MA0143.3	19	0	+	0	0	.
chr12	21771601	21771602	chr12:21771602:T:C	rs767351726	T	C	T	Sox2_MA0143.3	14	0	-	0	0	.
chr12	21818754	21818755	chr12:21818755:A:G	rs74070304	A	G	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr12	22038369	22038370	chr12:22038370:A:G	rs12319232	A	G	G	Sox2_MA0143.3	16	0	+	0	0	.
chr12	22082142	22082143	chr12:22082143:T:G	rs2277390	T	G	T	Sox2_MA0143.3	-2	0	+	0	0	.
chr12	22131076	22131077	chr12:22131077:T:A	rs6487285	T	A	A	Sox2_MA0143.3	7	1	+	9.613475778572903	3.3675628303222993	CCATTGTT
chr12	22254802	22254803	chr12:22254803:C:G	rs11612801	C	G	C	Sox2_MA0143.3	8	0	+	0	0	.
chr12	22268429	22268430	chr12:22268430:T:C	rs36114533	T	C	T	Sox2_MA0143.3	-14	0	-	0	0	.
chr12	22312494	22312495	chr12:22312495:A:G	rs76709546	A	G	A	Sox2_MA0143.3	-6	0	+	0	0	.
chr12	22625091	22625092	chr12:22625092:A:C	chr12:22625092:A:C	A	C	A	Sox2_MA0143.3	22	0	+	0	0	.
chr12	22657061	22657062	chr12:22657062:T:G	rs61921419	T	G	T	Sox2_MA0143.3	14	0	+	0	0	.
chr12	22947392	22947393	chr12:22947393:C:T	rs1496564	C	T	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr12	23585477	23585478	chr12:23585478:G:A	rs1479456	G	A	A	Sox2_MA0143.3	27	0	-	0	0	.
chr12	24133583	24133584	chr12:24133584:G:T	rs535614861	G	T	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr12	24230370	24230371	chr12:24230371:C:T	rs11047322	C	T	T	Sox2_MA0143.3	-4	0	-	0	0	.
chr12	24280641	24280642	chr12:24280642:G:A	rs488353	G	A	G	Sox2_MA0143.3	12	0	-	0	0	.
chr12	24299776	24299777	chr12:24299777:G:A	rs11047358	G	A	G	Sox2_MA0143.3	21	0	-	0	0	.
chr12	24460812	24460813	chr12:24460813:C:T	rs1396200	C	T	T	Sox2_MA0143.3	-5	0	+	0	0	.
chr12	24500737	24500738	chr12:24500738:C:T	rs4963767	C	T	C	Sox2_MA0143.3	23	0	+	0	0	.
chr12	24562690	24562691	chr12:24562691:A:C	chr12:24562691:A:C	A	C	a	Sox2_MA0143.3	-19	0	-	0	0	.
chr12	24747721	24747722	chr12:24747722:A:T	rs35851813	A	T	T	Sox2_MA0143.3	-3	0	-	0	0	.
chr12	24750475	24750476	chr12:24750476:T:A	rs75893942	T	A	T	Sox2_MA0143.3	25	0	-	0	0	.
chr12	24755202	24755203	chr12:24755203:G:A	rs116310584	G	A	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr12	24755459	24755460	chr12:24755460:T:C	rs6487412	T	C	T	Sox2_MA0143.3	17	0	+	0	0	.
chr12	24815134	24815135	chr12:24815135:T:C	rs1054279	T	C	T	Sox2_MA0143.3	4	1	+	9.206767037375712	2.2980122580604916	CCTTTGTC
chr12	24815814	24815815	chr12:24815815:A:G	rs4453321	A	G	A	Sox2_MA0143.3	-13	0	-	0	0	.
chr12	24822668	24822669	chr12:24822669:A:G	rs10771128	A	G	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr12	24889523	24889524	chr12:24889524:T:A	rs12817139	T	A	T	Sox2_MA0143.3	15	0	+	0	0	.
chr12	24947980	24947981	chr12:24947981:A:G	rs138999441	A	G	a	Sox2_MA0143.3	-9	0	-	0	0	.
chr12	24970264	24970265	chr12:24970265:G:A	rs74762946	G	A	g	Sox2_MA0143.3	23	0	+	0	0	.
chr12	25071739	25071740	chr12:25071740:T:G	rs10842457	T	G	T	Sox2_MA0143.3	22	0	+	0	0	.
chr12	25104494	25104495	chr12:25104495:C:T	rs7316187	C	T	C	Sox2_MA0143.3	23	0	-	0	0	.
chr12	25186908	25186909	chr12:25186909:A:G	rs11047880	A	G	A	Sox2_MA0143.3	21	0	+	0	0	.
chr12	25189695	25189696	chr12:25189696:A:C	rs11047885	A	C	C	Sox2_MA0143.3	12	0	-	0	0	.
chr12	25251908	25251909	chr12:25251909:C:G	rs150940108	C	G	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr12	25299297	25299298	chr12:25299298:T:C	rs10771198	T	C	T	Sox2_MA0143.3	-4	0	+	0	0	.
chr12	25303584	25303585	chr12:25303585:C:A	rs59307134	C	A	C	Sox2_MA0143.3	24	0	-	0	0	.
chr12	25420304	25420305	chr12:25420305:G:A	rs2340378	G	A	A	Sox2_MA0143.3	-16	0	+	0	0	.
chr12	25440798	25440799	chr12:25440799:G:A	rs2171844	G	A	A	Sox2_MA0143.3	19	0	-	0	0	.
chr12	25459800	25459801	chr12:25459801:A:G	rs148599512	A	G	A	Sox2_MA0143.3	18	0	-	0	0	.
chr12	25493397	25493398	chr12:25493398:T:C	rs7302125	T	C	C	Sox2_MA0143.3	10	0	-	0	0	.
chr12	25506280	25506281	chr12:25506281:G:A	rs10219694	G	A	A	Sox2_MA0143.3	0	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr12	25617976	25617977	chr12:25617977:G:A	rs1877145	G	A	a	Sox2_MA0143.3	7	1	+	8.676919043985553	3.3675628303222993	CCATTGTG
chr12	25694232	25694233	chr12:25694233:T:G	rs535481859	T	G	T	Sox2_MA0143.3	-19	0	+	0	0	.
chr12	25843893	25843894	chr12:25843894:C:T	rs706498	C	T	C	Sox2_MA0143.3	0	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr12	25856012	25856013	chr12:25856013:G:C	rs1042897612	G	C	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr12	25908528	25908529	chr12:25908529:G:A	rs4963931	G	A	G	Sox2_MA0143.3	10	0	+	0	0	.
chr12	25957550	25957551	chr12:25957551:A:C	rs4963944	A	C	A	Sox2_MA0143.3	-9	0	-	0	0	.
chr12	26007369	26007370	chr12:26007370:C:T	rs2132317	C	T	C	Sox2_MA0143.3	23	0	+	0	0	.
chr12	26027961	26027962	chr12:26027962:A:G	rs73079027	A	G	A	Sox2_MA0143.3	-20	0	-	0	0	.
chr12	26072080	26072081	chr12:26072081:T:G	rs1513129	T	G	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr12	26119890	26119891	chr12:26119891:T:G	rs10842678	T	G	T	Sox2_MA0143.3	16	0	+	0	0	.
chr12	26219817	26219818	chr12:26219818:T:G	rs73090814	T	G	T	Sox2_MA0143.3	-9	0	+	0	0	.
chr12	26246895	26246896	chr12:26246896:C:T	rs16930376	C	T	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr12	26256466	26256467	chr12:26256467:T:C	rs11616178	T	C	T	Sox2_MA0143.3	-11	0	+	0	0	.
chr12	26282729	26282730	chr12:26282730:G:A	rs76485737	G	A	G	Sox2_MA0143.3	12	0	+	0	0	.
chr12	26426036	26426037	chr12:26426037:A:T	rs12227450	A	T	A	Sox2_MA0143.3	-9	0	-	0	0	.
chr12	26523702	26523703	chr12:26523703:A:T	rs12372554	A	T	T	Sox2_MA0143.3	2	1	-	3.5547341015215945	3.3675628303222993	CCTTTGTA
chr12	26572270	26572271	chr12:26572271:A:G	rs28457244	A	G	A	Sox2_MA0143.3	25	0	+	0	0	.
chr12	26629365	26629366	chr12:26629366:C:T	rs545661838	C	T	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr12	26648783	26648784	chr12:26648784:G:A	rs925284769	G	A	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr12	26704791	26704792	chr12:26704792:A:G	rs10771295	A	G	A	Sox2_MA0143.3	-14	0	-	0	0	.
chr12	26789929	26789930	chr12:26789930:C:T	rs61920587	C	T	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr12	26820771	26820772	chr12:26820772:C:T	rs182780779	C	T	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr12	26833588	26833589	chr12:26833589:A:G	rs57911398	A	G	G	Sox2_MA0143.3	9	0	-	0	0	.
chr12	26833590	26833591	chr12:26833591:C:T	chr12:26833591:C:T	C	T	C	Sox2_MA0143.3	7	1	-	8.676919043985553	3.3675628303222993	CCATTGTG
chr12	26857611	26857612	chr12:26857612:A:G	rs11048748	A	G	A	Sox2_MA0143.3	18	0	-	0	0	.
chr12	26896397	26896398	chr12:26896398:C:G	rs12425210	C	G	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr12	26919218	26919219	chr12:26919219:A:T	rs4353353	A	T	A	Sox2_MA0143.3	23	0	-	0	0	.
chr12	27056866	27056867	chr12:27056867:G:A	rs116904075	G	A	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr12	27158548	27158549	chr12:27158549:G:A	rs841603	G	A	G	Sox2_MA0143.3	8	0	-	0	0	.
chr12	27191135	27191136	chr12:27191136:C:T	rs11048908	C	T	C	Sox2_MA0143.3	14	0	+	0	0	.
chr12	27255844	27255845	chr12:27255845:T:C	rs10771327	T	C	T	Sox2_MA0143.3	4	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr12	27330905	27330906	chr12:27330906:G:C	rs7137588	G	C	G	Sox2_MA0143.3	24	0	-	0	0	.
chr12	27330923	27330924	chr12:27330924:A:G	rs11048972	A	G	A	Sox2_MA0143.3	6	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr12	27332185	27332186	chr12:27332186:A:C	rs759728427	A	C	A	Sox2_MA0143.3	-18	0	-	0	0	.
chr12	27437668	27437669	chr12:27437669:C:T	rs2061722	C	T	T	Sox2_MA0143.3	-14	0	-	0	0	.
chr12	27505972	27505973	chr12:27505973:A:T	rs79605091	A	T	A	Sox2_MA0143.3	4	1	-	9.800647049772198	2.8918922704569785	CCTTTGTT
chr12	27534610	27534611	chr12:27534611:T:C	rs749189066	T	C	T	Sox2_MA0143.3	-17	0	-	0	0	.
chr12	27552721	27552722	chr12:27552722:A:C	rs142497078	A	C	A	Sox2_MA0143.3	11	0	-	0	0	.
chr12	27564887	27564888	chr12:27564888:A:G	chr12:27564888:A:G	A	G	A	Sox2_MA0143.3	-5	0	+	0	0	.
chr12	27610971	27610972	chr12:27610972:G:A	rs28406053	G	A	A	Sox2_MA0143.3	-10	0	+	0	0	.
chr12	27635852	27635853	chr12:27635853:T:C	rs1972680	T	C	C	Sox2_MA0143.3	27	0	+	0	0	.
chr12	27711783	27711784	chr12:27711784:A:G	rs7311141	A	G	A	Sox2_MA0143.3	-18	0	+	0	0	.
chr12	27782534	27782535	chr12:27782535:C:G	rs3751234	C	G	C	Sox2_MA0143.3	27	0	-	0	0	.
chr12	27808606	27808607	chr12:27808607:G:T	rs6487638	G	T	T	Sox2_MA0143.3	11	0	+	0	0	.
chr12	27834082	27834083	chr12:27834083:C:T	rs4931544	C	T	T	Sox2_MA0143.3	1	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr12	27834095	27834096	chr12:27834096:G:A	rs78213465	G	A	G	Sox2_MA0143.3	14	0	+	0	0	.
chr12	27976444	27976445	chr12:27976445:A:G	rs3912168	A	G	G	Sox2_MA0143.3	-11	0	+	0	0	.
chr12	28040648	28040649	chr12:28040649:A:G	rs10843074	A	G	A	Sox2_MA0143.3	4	1	-	3.5547341015215945	-3.3540206777936254	CCTTTGTA
chr12	28061155	28061156	chr12:28061156:T:C	rs1554986	T	C	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr12	28192461	28192462	chr12:28192462:G:A	rs12372073	G	A	A	Sox2_MA0143.3	5	1	+	9.206767037375712	2.298012258060492	CCTTTGTC
chr12	28344964	28344965	chr12:28344965:C:A	rs11049545	C	A	a	Sox2_MA0143.3	27	0	+	0	0	.
chr12	28564712	28564713	chr12:28564713:A:G	rs11049716	A	G	G	Sox2_MA0143.3	27	0	+	0	0	.
chr12	28569537	28569538	chr12:28569538:G:A	rs867028213	G	A	G	Sox2_MA0143.3	21	0	-	0	0	.
chr12	28655160	28655161	chr12:28655161:A:G	rs11049770	A	G	A	Sox2_MA0143.3	-5	0	+	0	0	.
chr12	28788462	28788463	chr12:28788463:A:G	rs4931094	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr12	28817717	28817718	chr12:28817718:C:T	rs309019	C	T	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr12	29026620	29026621	chr12:29026621:G:A	rs12831851	G	A	C	Sox2_MA0143.3	27	0	-	0	0	.
chr12	29026652	29026653	chr12:29026653:A:T	rs10771466	A	T	T	Sox2_MA0143.3	-5	0	-	0	0	.
chr12	29112857	29112858	chr12:29112858:G:A	rs56014476	G	A	G	Sox2_MA0143.3	24	0	-	0	0	.
chr12	29134075	29134076	chr12:29134076:G:A	rs7309171	G	A	G	Sox2_MA0143.3	9	0	-	0	0	.
chr12	29347078	29347079	chr12:29347079:T:A	rs12817578	T	A	T	Sox2_MA0143.3	-14	0	+	0	0	.
chr12	29416404	29416405	chr12:29416405:T:C	rs6487823	T	C	C	Sox2_MA0143.3	14	0	-	0	0	.
chr12	29543579	29543580	chr12:29543580:G:T	rs57816450	G	T	G	Sox2_MA0143.3	27	0	+	0	0	.
chr12	29690281	29690282	chr12:29690282:C:T	rs2219763	C	T	T	Sox2_MA0143.3	24	0	+	0	0	.
chr12	29768801	29768802	chr12:29768802:A:G	rs4931216	A	G	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr12	29889587	29889588	chr12:29889588:T:C	rs6487855	T	C	C	Sox2_MA0143.3	17	0	-	0	0	.
chr12	30111099	30111100	chr12:30111100:A:G	rs115551573	A	G	A	Sox2_MA0143.3	13	0	+	0	0	.
chr12	30111109	30111110	chr12:30111110:A:G	rs11833720	A	G	A	Sox2_MA0143.3	23	0	+	0	0	.
chr12	30136559	30136560	chr12:30136560:C:T	rs1385563	C	T	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr12	30157515	30157516	chr12:30157516:C:G	rs113044502	C	G	C	Sox2_MA0143.3	9	0	+	0	0	.
chr12	30219232	30219233	chr12:30219233:C:A	rs2351225	C	A	C	Sox2_MA0143.3	0	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr12	30384255	30384256	chr12:30384256:T:A	rs354109	T	A	T	Sox2_MA0143.3	7	1	+	9.800647049772198	3.5547341015215945	CCTTTGTT
chr12	30416553	30416554	chr12:30416554:T:C	rs7973114	T	C	T	Sox2_MA0143.3	3	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr12	30571032	30571033	chr12:30571033:T:C	rs1682421	T	C	C	Sox2_MA0143.3	2	1	-	9.613475778572903	3.494828071296623	CCATTGTT
chr12	30733500	30733501	chr12:30733501:G:A	rs11613738	G	A	A	Sox2_MA0143.3	-14	0	-	0	0	.
chr12	30795144	30795145	chr12:30795145:C:G	chr12:30795145:C:G	C	G	C	Sox2_MA0143.3	17	0	+	0	0	.
chr12	30796882	30796883	chr12:30796883:G:T	rs73279658	G	T	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr12	30807389	30807390	chr12:30807390:G:A	rs144108671	G	A	g	Sox2_MA0143.3	-3	0	-	0	0	.
chr12	30807395	30807396	chr12:30807396:G:C	chr12:30807396:G:C	G	C	g	Sox2_MA0143.3	-9	0	-	0	0	.
chr12	30807403	30807404	chr12:30807404:C:T	rs139984252	C	T	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr12	30807406	30807407	chr12:30807407:C:T	rs141484627	C	T	C	Sox2_MA0143.3	-20	0	-	0	0	.
chr12	30819806	30819807	chr12:30819807:T:C	rs1385523	T	C	C	Sox2_MA0143.3	2	1	-	9.613475778572903	3.494828071296623	CCATTGTT
chr12	30943688	30943689	chr12:30943689:C:G	rs113684841	C	G	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr12	30993124	30993125	chr12:30993125:G:A	rs35073	G	A	G	Sox2_MA0143.3	13	0	-	0	0	.
chr12	31103879	31103880	chr12:31103880:C:G	rs114737963	C	G	C	Sox2_MA0143.3	8	0	+	0	0	.
chr12	31206190	31206191	chr12:31206191:C:T	rs12810278	C	T	.	Sox2_MA0143.3	7	1	+	9.206767037375712	9.800647049772198	CCTTTGTC
chr12	31207705	31207706	chr12:31207706:G:A	rs7960884	G	A	.	Sox2_MA0143.3	8	0	-	0	0	.
chr12	31207998	31207999	chr12:31207999:C:T	rs573443637	C	T	.	Sox2_MA0143.3	17	0	-	0	0	.
chr12	31207999	31208000	chr12:31208000:A:G	rs7960946	A	G	.	Sox2_MA0143.3	16	0	-	0	0	.
chr12	31221043	31221044	chr12:31221044:C:T	rs11051334	C	T	.	Sox2_MA0143.3	-3	0	-	0	0	.
chr12	31238212	31238213	chr12:31238213:C:T	rs56951463	C	T	C	Sox2_MA0143.3	7	1	-	8.864090315184848	3.5547341015215945	CCTTTGTG
chr12	31258116	31258117	chr12:31258117:T:C	rs12828682	T	C	t	Sox2_MA0143.3	-2	0	-	0	0	.
chr12	31403192	31403193	chr12:31403193:A:C	rs708198	A	C	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr12	31436912	31436913	chr12:31436913:C:A	rs80151082	C	A	C	Sox2_MA0143.3	19	0	+	0	0	.
chr12	31517443	31517444	chr12:31517444:A:G	rs12818749	A	G	A	Sox2_MA0143.3	26	0	+	0	0	.
chr12	31556141	31556142	chr12:31556142:C:T	rs2352048	C	T	C	Sox2_MA0143.3	14	0	-	0	0	.
chr12	31556167	31556168	chr12:31556168:T:C	rs1259400	T	C	C	Sox2_MA0143.3	-12	0	-	0	0	.
chr12	31573934	31573935	chr12:31573935:T:C	rs1677154	T	C	G	Sox2_MA0143.3	15	0	-	0	0	.
chr12	31608480	31608481	chr12:31608481:A:G	rs1716210	A	G	G	Sox2_MA0143.3	9	0	+	0	0	.
chr12	31749362	31749363	chr12:31749363:C:G	rs78430408	C	G	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr12	31750836	31750837	chr12:31750837:G:A	rs11051558	G	A	G	Sox2_MA0143.3	-11	0	+	0	0	.
chr12	31752195	31752196	chr12:31752196:G:C	rs140583551	G	C	G	Sox2_MA0143.3	-11	0	+	0	0	.
chr12	31868555	31868556	chr12:31868556:G:A	rs7963885	G	A	G	Sox2_MA0143.3	-14	0	+	0	0	.
chr12	31886779	31886780	chr12:31886780:T:G	rs1797782	T	G	G	Sox2_MA0143.3	10	0	+	0	0	.
chr12	31917770	31917771	chr12:31917771:A:T	rs10431281	A	T	A	Sox2_MA0143.3	-15	0	+	0	0	.
chr12	31922665	31922666	chr12:31922666:G:A	rs11051677	G	A	G	Sox2_MA0143.3	1	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr12	31922676	31922677	chr12:31922677:G:A	rs11051678	G	A	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr12	31922680	31922681	chr12:31922681:C:T	rs11051679	C	T	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr12	31923020	31923021	chr12:31923021:C:A	rs116619823	C	A	C	Sox2_MA0143.3	5	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr12	31923118	31923119	chr12:31923119:G:A	rs74388515	G	A	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr12	31923160	31923161	chr12:31923161:T:A	rs4459399	T	A	T	Sox2_MA0143.3	22	0	+	0	0	.
chr12	31923801	31923802	chr12:31923802:T:C	rs1259769	T	C	T	Sox2_MA0143.3	6	1	+	9.019595766176417	2.110840986861197	CCATTGTC
chr12	31959475	31959476	chr12:31959476:C:G	rs550787184	C	G	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr12	31959477	31959478	chr12:31959478:T:C	rs770171213	T	C	T	Sox2_MA0143.3	-5	0	+	0	0	.
chr12	32030585	32030586	chr12:32030586:G:A	rs10047611	G	A	G	Sox2_MA0143.3	-9	0	+	0	0	.
chr12	32033933	32033934	chr12:32033934:T:G	rs4931599	T	G	T	Sox2_MA0143.3	26	0	-	0	0	.
chr12	32048215	32048216	chr12:32048216:G:A	rs1716947	G	A	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr12	32048232	32048233	chr12:32048233:A:G	rs1798595	A	G	A	Sox2_MA0143.3	9	0	+	0	0	.
chr12	32054498	32054499	chr12:32054499:A:G	rs1798589	A	G	G	Sox2_MA0143.3	-16	0	-	0	0	.
chr12	32054575	32054576	chr12:32054576:G:T	rs11051760	G	T	g	Sox2_MA0143.3	-11	0	+	0	0	.
chr12	32093274	32093275	chr12:32093275:T:C	rs1798616	T	C	T	Sox2_MA0143.3	22	0	-	0	0	.
chr12	32125025	32125026	chr12:32125026:A:G	rs1798612	A	G	G	Sox2_MA0143.3	7	1	+	3.5547341015215945	8.864090315184848	CCTTTGTA
chr12	32125027	32125028	chr12:32125028:A:G	rs1798611	A	G	G	Sox2_MA0143.3	9	0	+	0	0	.
chr12	32140035	32140036	chr12:32140036:C:A	rs57434126	C	A	C	Sox2_MA0143.3	15	0	+	0	0	.
chr12	32140141	32140142	chr12:32140142:T:G	rs565327215	T	G	T	Sox2_MA0143.3	26	0	+	0	0	.
chr12	32284696	32284697	chr12:32284697:A:G	rs814243	A	G	A	Sox2_MA0143.3	19	0	-	0	0	.
chr12	32312172	32312173	chr12:32312173:G:T	rs7972212	G	T	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr12	32312173	32312174	chr12:32312174:C:T	rs7972023	C	T	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr12	32566838	32566839	chr12:32566839:C:G	rs11052079	C	G	C	Sox2_MA0143.3	25	0	+	0	0	.
chr12	32574497	32574498	chr12:32574498:A:G	rs11052085	A	G	A	Sox2_MA0143.3	-15	0	+	0	0	.
chr12	32574524	32574525	chr12:32574525:G:A	rs7313539	G	A	A	Sox2_MA0143.3	12	0	+	0	0	.
chr12	32647356	32647357	chr12:32647357:A:C	rs1880557	A	C	C	Sox2_MA0143.3	4	1	-	8.864090315184848	1.9553355358696274	CCTTTGTG
chr12	32785517	32785518	chr12:32785518:A:G	rs10844349	A	G	A	Sox2_MA0143.3	-4	0	-	0	0	.
chr12	32809584	32809585	chr12:32809585:G:T	rs1114702	G	T	T	Sox2_MA0143.3	9	0	-	0	0	.
chr12	32921535	32921536	chr12:32921536:C:T	rs6488106	C	T	C	Sox2_MA0143.3	25	0	-	0	0	.
chr12	32929339	32929340	chr12:32929340:G:A	rs112184194	G	A	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr12	32929395	32929396	chr12:32929396:C:G	rs55833453	C	G	C	Sox2_MA0143.3	15	0	-	0	0	.
chr12	33047562	33047563	chr12:33047563:G:A	rs10844437	G	A	G	Sox2_MA0143.3	24	0	+	0	0	.
chr12	33265225	33265226	chr12:33265226:C:T	rs10772058	C	T	C	Sox2_MA0143.3	7	1	-	8.864090315184848	3.5547341015215945	CCTTTGTG
chr12	33581847	33581848	chr12:33581848:A:G	rs2218650	A	G	G	Sox2_MA0143.3	20	0	-	0	0	.
chr12	33940210	33940211	chr12:33940211:A:G	rs73309466	A	G	A	Sox2_MA0143.3	3	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr12	34404164	34404165	chr12:34404165:C:T	rs74077607	C	T	.	Sox2_MA0143.3	-13	0	-	0	0	.
chr12	34404441	34404442	chr12:34404442:G:A	rs150525689	G	A	.	Sox2_MA0143.3	0	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr12	34404456	34404457	chr12:34404457:G:T	rs74077617	G	T	.	Sox2_MA0143.3	-15	0	-	0	0	.
chr12	34524688	34524689	chr12:34524689:T:C	rs9739504	T	C	.	Sox2_MA0143.3	15	0	-	0	0	.
chr12	36010840	36010841	chr12:36010841:T:A	rs1244473230	T	A	.	Sox2_MA0143.3	-16	0	+	0	0	.
chr12	37543756	37543757	chr12:37543757:G:A	rs140622258	G	A	.	Sox2_MA0143.3	14	0	+	0	0	.
chr12	37543763	37543764	chr12:37543764:G:A	rs182101255	G	A	.	Sox2_MA0143.3	21	0	+	0	0	.
chr12	37598820	37598821	chr12:37598821:G:C	rs2387447	G	C	.	Sox2_MA0143.3	-14	0	+	0	0	.
chr12	38053861	38053862	chr12:38053862:G:C	rs73268182	G	C	.	Sox2_MA0143.3	27	0	-	0	0	.
chr12	38053898	38053899	chr12:38053899:A:G	rs116001685	A	G	.	Sox2_MA0143.3	-10	0	-	0	0	.
chr12	38138628	38138629	chr12:38138629:C:G	rs10785494	C	G	c	Sox2_MA0143.3	-3	0	+	0	0	.
chr12	38144528	38144529	chr12:38144529:G:A	rs11182457	G	A	g	Sox2_MA0143.3	19	0	+	0	0	.
chr12	38144535	38144536	chr12:38144536:A:G	rs559525652	A	G	a	Sox2_MA0143.3	26	0	+	0	0	.
chr12	38368338	38368339	chr12:38368339:G:A	rs7976308	G	A	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr12	38374892	38374893	chr12:38374893:A:G	rs10880983	A	G	A	Sox2_MA0143.3	2	1	+	8.676919043985553	2.5582713367092715	CCATTGTG
chr12	38870214	38870215	chr12:38870215:T:G	rs1033219983	T	G	T	Sox2_MA0143.3	6	1	+	8.676919043985553	1.7681642646703326	CCATTGTG
chr12	38906737	38906738	chr12:38906738:C:G	rs779660230	C	G	C	Sox2_MA0143.3	15	0	+	0	0	.
chr12	39173982	39173983	chr12:39173983:G:A	rs73084857	G	A	G	Sox2_MA0143.3	-14	0	+	0	0	.
chr12	39239805	39239806	chr12:39239806:G:C	rs75888021	G	C	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr12	39397898	39397899	chr12:39397899:G:A	rs188167562	G	A	G	Sox2_MA0143.3	1	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr12	39438732	39438733	chr12:39438733:A:G	rs79873478	A	G	A	Sox2_MA0143.3	-11	0	-	0	0	.
chr12	39724446	39724447	chr12:39724447:A:G	rs4388963	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr12	39805130	39805131	chr12:39805131:C:A	rs10877474	C	A	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr12	40011428	40011429	chr12:40011429:T:C	rs28370767	T	C	T	Sox2_MA0143.3	4	1	+	9.800647049772198	2.8918922704569785	CCTTTGTT
chr12	40011450	40011451	chr12:40011451:T:C	rs11174728	T	C	T	Sox2_MA0143.3	26	0	+	0	0	.
chr12	40017315	40017316	chr12:40017316:T:C	rs1482283	T	C	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr12	40188901	40188902	chr12:40188902:G:A	rs55993200	G	A	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr12	40281249	40281250	chr12:40281250:A:G	rs11175845	A	G	A	Sox2_MA0143.3	2	1	+	8.676919043985553	2.5582713367092715	CCATTGTG
chr12	40332125	40332126	chr12:40332126:A:G	rs10878386	A	G	A	Sox2_MA0143.3	-12	0	+	0	0	.
chr12	40474964	40474965	chr12:40474965:A:G	rs1444222	A	G	G	Sox2_MA0143.3	6	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr12	40478286	40478287	chr12:40478287:C:T	rs11176808	C	T	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr12	40668396	40668397	chr12:40668397:C:T	rs76192176	C	T	C	Sox2_MA0143.3	-12	0	-	0	0	.
chr12	40671551	40671552	chr12:40671552:T:A	rs11177713	T	A	A	Sox2_MA0143.3	-20	0	-	0	0	.
chr12	40853460	40853461	chr12:40853461:A:G	rs7312428	A	G	A	Sox2_MA0143.3	-11	0	+	0	0	.
chr12	40893988	40893989	chr12:40893989:C:G	rs10879335	C	G	G	Sox2_MA0143.3	21	0	+	0	0	.
chr12	40901744	40901745	chr12:40901745:A:G	rs4768318	A	G	A	Sox2_MA0143.3	-16	0	-	0	0	.
chr12	40917567	40917568	chr12:40917568:T:G	rs11179040	T	G	T	Sox2_MA0143.3	-4	0	+	0	0	.
chr12	40929047	40929048	chr12:40929048:C:T	rs79314888	C	T	C	Sox2_MA0143.3	10	0	+	0	0	.
chr12	41201786	41201787	chr12:41201787:C:T	rs1431107	C	T	T	Sox2_MA0143.3	19	0	-	0	0	.
chr12	41259603	41259604	chr12:41259604:A:C	rs11180507	A	C	C	Sox2_MA0143.3	15	0	+	0	0	.
chr12	41334663	41334664	chr12:41334664:G:A	rs117264624	G	A	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr12	41470800	41470801	chr12:41470801:C:T	rs2608715	C	T	C	Sox2_MA0143.3	24	0	-	0	0	.
chr12	41615300	41615301	chr12:41615301:G:C	rs287035	G	C	G	Sox2_MA0143.3	23	0	-	0	0	.
chr12	41627844	41627845	chr12:41627845:G:C	rs3847986	G	C	G	Sox2_MA0143.3	16	0	-	0	0	.
chr12	41932972	41932973	chr12:41932973:T:C	rs140064685	T	C	T	Sox2_MA0143.3	3	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr12	42081635	42081636	chr12:42081636:T:G	rs7957213	T	G	t	Sox2_MA0143.3	9	0	+	0	0	.
chr12	42169271	42169272	chr12:42169272:T:C	rs11181359	T	C	T	Sox2_MA0143.3	-9	0	-	0	0	.
chr12	42173997	42173998	chr12:42173998:C:T	rs11181364	C	T	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr12	42181150	42181151	chr12:42181151:G:C	rs1683196	G	C	G	Sox2_MA0143.3	-5	0	+	0	0	.
chr12	42460402	42460403	chr12:42460403:A:G	rs3747562	A	G	G	Sox2_MA0143.3	20	0	+	0	0	.
chr12	42539771	42539772	chr12:42539772:G:A	rs12309460	G	A	G	Sox2_MA0143.3	7	1	+	8.864090315184848	3.5547341015215945	CCTTTGTG
chr12	42607733	42607734	chr12:42607734:C:A	rs2406864	C	A	C	Sox2_MA0143.3	24	0	-	0	0	.
chr12	42739935	42739936	chr12:42739936:G:A	rs1000413	G	A	G	Sox2_MA0143.3	19	0	-	0	0	.
chr12	42790167	42790168	chr12:42790168:T:C	rs2678132	T	C	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr12	42790526	42790527	chr12:42790527:C:T	rs2731003	C	T	C	Sox2_MA0143.3	12	0	-	0	0	.
chr12	42821526	42821527	chr12:42821527:C:T	rs10785378	C	T	T	Sox2_MA0143.3	8	0	+	0	0	.
chr12	42859611	42859612	chr12:42859612:T:G	rs1520832	T	G	G	Sox2_MA0143.3	14	0	+	0	0	.
chr12	42985740	42985741	chr12:42985741:G:A	rs79829416	G	A	G	Sox2_MA0143.3	-3	0	-	0	0	.
chr12	43094890	43094891	chr12:43094891:T:C	rs954950	T	C	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr12	43180627	43180628	chr12:43180628:A:C	rs61926436	A	C	A	Sox2_MA0143.3	26	0	+	0	0	.
chr12	43228194	43228195	chr12:43228195:G:A	rs11181953	G	A	G	Sox2_MA0143.3	11	0	-	0	0	.
chr12	43368064	43368065	chr12:43368065:C:T	rs10880472	C	T	C	Sox2_MA0143.3	25	0	+	0	0	.
chr12	43549728	43549729	chr12:43549729:A:G	rs275633	A	G	G	Sox2_MA0143.3	17	0	+	0	0	.
chr12	43675918	43675919	chr12:43675919:T:G	rs189778636	T	G	T	Sox2_MA0143.3	11	0	-	0	0	.
chr12	43717734	43717735	chr12:43717735:T:C	rs10880551	T	C	T	Sox2_MA0143.3	-7	0	+	0	0	.
chr12	43759545	43759546	chr12:43759546:C:T	rs547329673	C	T	C	Sox2_MA0143.3	24	0	-	0	0	.
chr12	43904613	43904614	chr12:43904614:G:A	rs4488262	G	A	A	Sox2_MA0143.3	5	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr12	43970101	43970102	chr12:43970102:A:G	rs116796240	A	G	A	Sox2_MA0143.3	9	0	+	0	0	.
chr12	44344055	44344056	chr12:44344056:G:C	chr12:44344056:G:C	G	C	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr12	44421262	44421263	chr12:44421263:C:T	rs11612521	C	T	C	Sox2_MA0143.3	5	1	-	8.676919043985553	1.7681642646703324	CCATTGTG
chr12	44523980	44523981	chr12:44523981:C:G	rs80174374	C	G	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr12	44523982	44523983	chr12:44523983:C:A	rs60837979	C	A	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr12	44654482	44654483	chr12:44654483:C:A	rs111518601	C	A	C	Sox2_MA0143.3	12	0	+	0	0	.
chr12	44655149	44655150	chr12:44655150:C:T	rs1452260	C	T	T	Sox2_MA0143.3	-5	0	-	0	0	.
chr12	44675347	44675348	chr12:44675348:G:C	rs180744619	G	C	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr12	44876327	44876328	chr12:44876328:G:A	rs530626524	G	A	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr12	44931112	44931113	chr12:44931113:T:G	rs372281	T	G	T	Sox2_MA0143.3	9	0	-	0	0	.
chr12	44931114	44931115	chr12:44931115:T:C	rs116540049	T	C	T	Sox2_MA0143.3	7	1	-	3.5547341015215945	8.864090315184848	CCTTTGTA
chr12	44996916	44996917	chr12:44996917:C:T	rs10880723	C	T	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr12	45034997	45034998	chr12:45034998:T:C	rs114547297	T	C	T	Sox2_MA0143.3	23	0	+	0	0	.
chr12	45232779	45232780	chr12:45232780:C:G	rs57314223	C	G	C	Sox2_MA0143.3	27	0	+	0	0	.
chr12	45276333	45276334	chr12:45276334:G:C	rs10467095	G	C	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr12	45309921	45309922	chr12:45309922:G:C	rs17095721	G	C	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr12	45408837	45408838	chr12:45408838:T:A	rs11183017	T	A	T	Sox2_MA0143.3	-18	0	+	0	0	.
chr12	45431733	45431734	chr12:45431734:G:A	rs1027108783	G	A	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr12	45689933	45689934	chr12:45689934:G:T	rs7138683	G	T	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr12	45912505	45912506	chr12:45912506:G:A	rs11183234	G	A	G	Sox2_MA0143.3	18	0	+	0	0	.
chr12	45967347	45967348	chr12:45967348:A:T	rs117507015	A	T	A	Sox2_MA0143.3	11	0	+	0	0	.
chr12	46152546	46152547	chr12:46152547:T:A	rs77932408	T	A	T	Sox2_MA0143.3	3	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr12	46219610	46219611	chr12:46219611:T:C	rs6582623	T	C	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr12	46269654	46269655	chr12:46269655:C:T	rs886366522	C	T	C	Sox2_MA0143.3	14	0	+	0	0	.
chr12	46349562	46349563	chr12:46349563:G:C	rs12368989	G	C	G	Sox2_MA0143.3	8	0	-	0	0	.
chr12	46369497	46369498	chr12:46369498:C:T	rs61406609	C	T	C	Sox2_MA0143.3	26	0	-	0	0	.
chr12	46399443	46399444	chr12:46399444:T:C	rs6582643	T	C	C	Sox2_MA0143.3	13	0	-	0	0	.
chr12	46462311	46462312	chr12:46462312:G:A	rs6582658	G	A	G	Sox2_MA0143.3	14	0	-	0	0	.
chr12	46491741	46491742	chr12:46491742:G:T	rs7132144	G	T	G	Sox2_MA0143.3	27	0	+	0	0	.
chr12	46495016	46495017	chr12:46495017:T:A	rs79128500	T	A	T	Sox2_MA0143.3	10	0	+	0	0	.
chr12	46498552	46498553	chr12:46498553:G:T	rs59521025	G	T	T	Sox2_MA0143.3	-16	0	+	0	0	.
chr12	46603821	46603822	chr12:46603822:C:T	chr12:46603822:C:T	C	T	C	Sox2_MA0143.3	1	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr12	46603846	46603847	chr12:46603847:A:T	rs7308386	A	T	A	Sox2_MA0143.3	26	0	+	0	0	.
chr12	46723276	46723277	chr12:46723277:C:T	rs2287467	C	T	T	Sox2_MA0143.3	-1	0	-	0	0	.
chr12	46736256	46736257	chr12:46736257:C:T	rs2111772	C	T	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr12	46772168	46772169	chr12:46772169:G:C	rs17097220	G	C	G	Sox2_MA0143.3	13	0	+	0	0	.
chr12	46999163	46999164	chr12:46999164:C:G	rs76975502	C	G	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr12	47034932	47034933	chr12:47034933:G:A	rs117481936	G	A	G	Sox2_MA0143.3	22	0	-	0	0	.
chr12	47068711	47068712	chr12:47068712:C:T	rs1017746310	C	T	C	Sox2_MA0143.3	12	0	+	0	0	.
chr12	47073234	47073235	chr12:47073235:C:T	rs7979883	C	T	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr12	47189284	47189285	chr12:47189285:G:A	rs77536037	G	A	G	Sox2_MA0143.3	22	0	+	0	0	.
chr12	47190503	47190504	chr12:47190504:G:A	rs10748464	G	A	A	Sox2_MA0143.3	19	0	+	0	0	.
chr12	47245742	47245743	chr12:47245743:T:C	rs11610206	T	C	t	Sox2_MA0143.3	-17	0	+	0	0	.
chr12	47272188	47272189	chr12:47272189:G:A	rs1017679761	G	A	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr12	47277095	47277096	chr12:47277096:A:G	rs140162431	A	G	A	Sox2_MA0143.3	-20	0	+	0	0	.
chr12	47316928	47316929	chr12:47316929:C:T	rs74917912	C	T	C	Sox2_MA0143.3	0	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr12	47396629	47396630	chr12:47396630:C:T	chr12:47396630:C:T	C	T	C	Sox2_MA0143.3	7	1	-	8.864090315184848	3.5547341015215945	CCTTTGTG
chr12	47637279	47637280	chr12:47637280:A:G	rs73102120	A	G	A	Sox2_MA0143.3	-3	0	-	0	0	.
chr12	47706342	47706343	chr12:47706343:G:A	rs771873160	G	A	G	Sox2_MA0143.3	-2	0	+	0	0	.
chr12	47715821	47715822	chr12:47715822:C:A	rs115925067	C	A	T	Sox2_MA0143.3	12	0	+	0	0	.
chr12	47764362	47764363	chr12:47764363:A:G	rs75464001	A	G	G	Sox2_MA0143.3	-12	0	+	0	0	.
chr12	47811020	47811021	chr12:47811021:A:G	rs7316233	A	G	A	Sox2_MA0143.3	4	1	-	8.676919043985553	1.7681642646703322	CCATTGTG
chr12	47819936	47819937	chr12:47819937:C:G	rs113736796	C	G	-	Sox2_MA0143.3	26	0	-	0	0	.
chr12	47902181	47902182	chr12:47902182:T:C	rs10083198	T	C	T	Sox2_MA0143.3	20	0	+	0	0	.
chr12	47967740	47967741	chr12:47967741:G:A	rs7307880	G	A	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr12	47991911	47991912	chr12:47991912:G:A	rs76002385	G	A	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr12	47997873	47997874	chr12:47997874:T:A	rs34392760	T	A	T	Sox2_MA0143.3	-4	0	+	0	0	.
chr12	48010870	48010871	chr12:48010871:G:C	rs9651981	G	C	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr12	48010908	48010909	chr12:48010909:G:A	rs9651993	G	A	g	Sox2_MA0143.3	22	0	+	0	0	.
chr12	48025276	48025277	chr12:48025277:A:G	rs11168361	A	G	A	Sox2_MA0143.3	16	0	-	0	0	.
chr12	48121318	48121319	chr12:48121319:A:G	rs60679254	A	G	A	Sox2_MA0143.3	-13	0	-	0	0	.
chr12	48185871	48185872	chr12:48185872:C:T	rs113003733	C	T	C	Sox2_MA0143.3	12	0	+	0	0	.
chr12	48185881	48185882	chr12:48185882:G:T	rs7487682	G	T	G	Sox2_MA0143.3	22	0	+	0	0	.
chr12	48186350	48186351	chr12:48186351:G:A	rs74432603	G	A	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr12	48380722	48380723	chr12:48380723:G:A	rs73102613	G	A	g	Sox2_MA0143.3	-20	0	-	0	0	.
chr12	48535831	48535832	chr12:48535832:T:C	rs7962421	T	C	T	Sox2_MA0143.3	24	0	+	0	0	.
chr12	48618676	48618677	chr12:48618677:A:G	rs115681680	A	G	A	Sox2_MA0143.3	-17	0	+	0	0	.
chr12	48677461	48677462	chr12:48677462:T:C	rs9332441	T	C	T	Sox2_MA0143.3	22	0	-	0	0	.
chr12	48681959	48681960	chr12:48681960:G:C	rs1017100209	G	C	G	Sox2_MA0143.3	5	1	+	9.206767037375712	2.298012258060492	CCTTTGTC
chr12	48681961	48681962	chr12:48681962:C:T	rs1429329604	C	T	C	Sox2_MA0143.3	7	1	+	9.206767037375712	9.800647049772198	CCTTTGTC
chr12	48805211	48805212	chr12:48805212:G:C	rs57970809	G	C	G	Sox2_MA0143.3	27	0	-	0	0	.
chr12	48818371	48818372	chr12:48818372:T:C	rs1001794598	T	C	T	Sox2_MA0143.3	-14	0	+	0	0	.
chr12	48884045	48884046	chr12:48884046:G:A	rs11168773	G	A	G	Sox2_MA0143.3	11	0	+	0	0	.
chr12	49092088	49092089	chr12:49092089:C:T	rs556205565	C	T	C	Sox2_MA0143.3	11	0	-	0	0	.
chr12	49110306	49110307	chr12:49110307:T:C	rs558007016	T	C	T	Sox2_MA0143.3	27	0	+	0	0	.
chr12	49293594	49293595	chr12:49293595:G:A	rs7486836	G	A	G	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr12	49293594	49293595	chr12:49293595:G:C	chr12:49293595:G:C	G	C	G	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr12	49341647	49341648	chr12:49341648:C:G	rs61110708	C	G	C	Sox2_MA0143.3	12	0	+	0	0	.
chr12	49367809	49367810	chr12:49367810:A:G	rs187463535	A	G	A	Sox2_MA0143.3	25	0	-	0	0	.
chr12	49368795	49368796	chr12:49368796:C:G	rs74784091	C	G	C	Sox2_MA0143.3	12	0	+	0	0	.
chr12	49378011	49378012	chr12:49378012:A:G	rs116590402	A	G	A	Sox2_MA0143.3	20	0	-	0	0	.
chr12	49420062	49420063	chr12:49420063:A:G	rs11837194	A	G	A	Sox2_MA0143.3	16	0	-	0	0	.
chr12	49535006	49535007	chr12:49535007:A:G	rs80011486	A	G	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr12	49548213	49548214	chr12:49548214:T:C	rs12321819	T	C	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr12	49625938	49625939	chr12:49625939:A:G	rs76702280	A	G	A	Sox2_MA0143.3	-9	0	+	0	0	.
chr12	49644785	49644786	chr12:49644786:C:T	rs74425229	C	T	C	Sox2_MA0143.3	27	0	+	0	0	.
chr12	49644953	49644954	chr12:49644954:A:G	rs146609932	A	G	A	Sox2_MA0143.3	9	0	+	0	0	.
chr12	49664620	49664621	chr12:49664621:G:A	rs150491359	G	A	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr12	49697422	49697423	chr12:49697423:T:G	rs79248495	T	G	T	Sox2_MA0143.3	-14	0	-	0	0	.
chr12	49808921	49808922	chr12:49808922:C:G	rs114225221	C	G	C	Sox2_MA0143.3	25	0	-	0	0	.
chr12	49808927	49808928	chr12:49808928:G:A	rs897059	G	A	G	Sox2_MA0143.3	19	0	-	0	0	.
chr12	49812673	49812674	chr12:49812674:C:T	rs139238497	C	T	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr12	49841616	49841617	chr12:49841617:C:T	rs77610178	C	T	C	Sox2_MA0143.3	25	0	+	0	0	.
chr12	49859131	49859132	chr12:49859132:G:A	rs7954572	G	A	A	Sox2_MA0143.3	25	0	-	0	0	.
chr12	49894702	49894703	chr12:49894703:G:A	rs12370694	G	A	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr12	49942854	49942855	chr12:49942855:T:G	rs416959	T	G	T	Sox2_MA0143.3	25	0	-	0	0	.
chr12	49945168	49945169	chr12:49945169:A:C	rs399023	A	C	A	Sox2_MA0143.3	8	0	+	0	0	.
chr12	49963070	49963071	chr12:49963071:A:G	rs74091167	A	G	A	Sox2_MA0143.3	8	0	+	0	0	.
chr12	49998634	49998635	chr12:49998635:C:T	rs116143726	C	T	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr12	50073860	50073861	chr12:50073861:G:T	rs706792	G	T	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr12	50088427	50088428	chr12:50088428:T:C	rs646782	T	C	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr12	50127057	50127058	chr12:50127058:G:A	rs7306213	G	A	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr12	50336674	50336675	chr12:50336675:C:T	rs7134595	C	T	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr12	50370816	50370817	chr12:50370817:C:T	rs74487572	C	T	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr12	50505847	50505848	chr12:50505848:T:G	rs80297575	T	G	T	Sox2_MA0143.3	2	1	+	9.206767037375712	2.900948058900136	CCTTTGTC
chr12	50580007	50580008	chr12:50580008:C:A	rs139462329	C	A	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr12	50912119	50912120	chr12:50912120:G:A	rs2111958	G	A	G	Sox2_MA0143.3	1	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr12	50912139	50912140	chr12:50912140:G:A	rs11169612	G	A	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr12	50923100	50923101	chr12:50923101:G:A	chr12:50923101:G:A	G	A	G	Sox2_MA0143.3	13	0	-	0	0	.
chr12	50934934	50934935	chr12:50934935:G:A	rs75430982	G	A	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr12	50999538	50999539	chr12:50999539:G:A	rs60886362	G	A	G	Sox2_MA0143.3	8	0	-	0	0	.
chr12	51237231	51237232	chr12:51237232:C:A	rs10735833	C	A	A	Sox2_MA0143.3	-7	0	-	0	0	.
chr12	51239903	51239904	chr12:51239904:G:T	rs79218506	G	T	G	Sox2_MA0143.3	10	0	+	0	0	.
chr12	51239904	51239905	chr12:51239905:A:T	rs78474497	A	T	A	Sox2_MA0143.3	11	0	+	0	0	.
chr12	51327130	51327131	chr12:51327131:C:T	rs17860387	C	T	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr12	51345863	51345864	chr12:51345864:C:G	rs17860287	C	G	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr12	51442640	51442641	chr12:51442641:G:A	rs7964740	G	A	A	Sox2_MA0143.3	9	0	+	0	0	.
chr12	51539505	51539506	chr12:51539506:G:A	rs7488902	G	A	G	Sox2_MA0143.3	21	0	-	0	0	.
chr12	51827998	51827999	chr12:51827999:T:C	rs566306	T	C	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr12	51828044	51828045	chr12:51828045:C:G	rs570541187	C	G	C	Sox2_MA0143.3	26	0	+	0	0	.
chr12	51863975	51863976	chr12:51863976:T:G	chr12:51863976:T:G	T	G	t	Sox2_MA0143.3	7	1	+	9.800647049772198	8.864090315184848	CCTTTGTT
chr12	51871997	51871998	chr12:51871998:A:G	rs750304	A	G	A	Sox2_MA0143.3	25	0	-	0	0	.
chr12	51874568	51874569	chr12:51874569:A:G	rs4606526	A	G	G	Sox2_MA0143.3	19	0	-	0	0	.
chr12	51885098	51885099	chr12:51885099:G:A	rs140526678	G	A	G	Sox2_MA0143.3	21	0	+	0	0	.
chr12	51926891	51926892	chr12:51926892:T:C	rs706825	T	C	T	Sox2_MA0143.3	-1	0	-	0	0	.
chr12	51946175	51946176	chr12:51946176:T:C	rs56161355	T	C	t	Sox2_MA0143.3	-10	0	+	0	0	.
chr12	52030821	52030822	chr12:52030822:G:A	rs2701113	G	A	A	Sox2_MA0143.3	-13	0	-	0	0	.
chr12	52041959	52041960	chr12:52041960:C:T	rs117513332	C	T	C	Sox2_MA0143.3	11	0	+	0	0	.
chr12	52056695	52056696	chr12:52056696:T:C	rs45510498	T	C	T	Sox2_MA0143.3	-2	0	+	0	0	.
chr12	52061016	52061017	chr12:52061017:C:T	rs61915173	C	T	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr12	52146148	52146149	chr12:52146149:T:A	rs10876237	T	A	A	Sox2_MA0143.3	13	0	-	0	0	.
chr12	52150629	52150630	chr12:52150630:A:G	rs138865294	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr12	52182952	52182953	chr12:52182953:G:A	rs10783495	G	A	A	Sox2_MA0143.3	11	0	+	0	0	.
chr12	52212776	52212777	chr12:52212777:C:T	rs71453275	C	T	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr12	52217666	52217667	chr12:52217667:G:C	rs10876246	G	C	G	Sox2_MA0143.3	8	0	-	0	0	.
chr12	52264118	52264119	chr12:52264119:G:T	rs2608013	G	T	T	Sox2_MA0143.3	16	0	+	0	0	.
chr12	52267119	52267120	chr12:52267120:C:T	rs2857686	C	T	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr12	52287497	52287498	chr12:52287498:T:C	rs4761785	T	C	t	Sox2_MA0143.3	-4	0	-	0	0	.
chr12	52315247	52315248	chr12:52315248:T:C	rs3741721	T	C	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr12	52347035	52347036	chr12:52347036:G:A	rs147943337	G	A	G	Sox2_MA0143.3	20	0	-	0	0	.
chr12	52348363	52348364	chr12:52348364:C:T	rs1732311	C	T	C	Sox2_MA0143.3	12	0	+	0	0	.
chr12	52423016	52423017	chr12:52423017:C:G	rs298106	C	G	C	Sox2_MA0143.3	1	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr12	52429151	52429152	chr12:52429152:T:C	rs1614460	T	C	C	Sox2_MA0143.3	-20	0	-	0	0	.
chr12	52436597	52436598	chr12:52436598:C:A	rs141410118	C	A	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr12	52441928	52441929	chr12:52441929:C:T	rs80204237	C	T	T	Sox2_MA0143.3	7	1	+	9.206767037375712	9.800647049772198	CCTTTGTC
chr12	52480370	52480371	chr12:52480371:T:G	rs864932	T	G	g	Sox2_MA0143.3	-19	0	+	0	0	.
chr12	52494370	52494371	chr12:52494371:A:T	rs3809180	A	T	T	Sox2_MA0143.3	6	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr12	52535767	52535768	chr12:52535768:G:A	rs659695	G	A	G	Sox2_MA0143.3	26	0	+	0	0	.
chr12	52579784	52579785	chr12:52579785:T:C	rs34462175	T	C	T	Sox2_MA0143.3	27	0	-	0	0	.
chr12	52581428	52581429	chr12:52581429:G:A	rs74095158	G	A	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr12	52582435	52582436	chr12:52582436:G:A	rs74095161	G	A	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr12	52585150	52585151	chr12:52585151:G:A	rs11170182	G	A	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr12	52634341	52634342	chr12:52634342:G:T	rs58791739	G	T	G	Sox2_MA0143.3	5	1	+	9.206767037375712	2.298012258060492	CCTTTGTC
chr12	52649851	52649852	chr12:52649852:G:A	chr12:52649852:G:A	G	A	g	Sox2_MA0143.3	9	0	-	0	0	.
chr12	52649851	52649852	chr12:52649852:G:T	rs632952	G	T	g	Sox2_MA0143.3	9	0	-	0	0	.
chr12	52667655	52667656	chr12:52667656:T:C	rs7314699	T	C	t	Sox2_MA0143.3	-15	0	+	0	0	.
chr12	52667697	52667698	chr12:52667698:A:G	rs17117840	A	G	a	Sox2_MA0143.3	27	0	+	0	0	.
chr12	52684655	52684656	chr12:52684656:G:A	rs60431391	G	A	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr12	52739227	52739228	chr12:52739228:T:C	rs4564385	T	C	C	Sox2_MA0143.3	25	0	-	0	0	.
chr12	52740140	52740141	chr12:52740141:A:G	rs34850088	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr12	52802092	52802093	chr12:52802093:T:C	rs10876349	T	C	T	Sox2_MA0143.3	-10	0	-	0	0	.
chr12	52829015	52829016	chr12:52829016:G:T	rs56360506	G	T	G	Sox2_MA0143.3	1	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr12	52836786	52836787	chr12:52836787:G:A	rs73106418	G	A	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr12	52870840	52870841	chr12:52870841:A:G	rs114553853	A	G	A	Sox2_MA0143.3	16	0	-	0	0	.
chr12	52872941	52872942	chr12:52872942:C:T	rs35125059	C	T	C	Sox2_MA0143.3	16	0	+	0	0	.
chr12	52875991	52875992	chr12:52875992:A:C	rs2682309	A	C	g	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr12	52876012	52876013	chr12:52876013:C:T	rs2682308	C	T	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr12	52885174	52885175	chr12:52885175:T:C	rs2682332	T	C	T	Sox2_MA0143.3	4	1	+	9.800647049772198	2.8918922704569785	CCTTTGTT
chr12	52892267	52892268	chr12:52892268:T:C	rs2131161	T	C	c	Sox2_MA0143.3	-4	0	-	0	0	.
chr12	52904156	52904157	chr12:52904157:A:T	rs927855966	A	T	A	Sox2_MA0143.3	6	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr12	52925854	52925855	chr12:52925855:A:T	rs61927926	A	T	A	Sox2_MA0143.3	-6	0	-	0	0	.
chr12	53039892	53039893	chr12:53039893:T:C	rs74502990	T	C	T	Sox2_MA0143.3	-17	0	+	0	0	.
chr12	53039924	53039925	chr12:53039925:C:G	rs1356993	C	G	C	Sox2_MA0143.3	15	0	+	0	0	.
chr12	53043122	53043123	chr12:53043123:A:G	rs4919727	A	G	A	Sox2_MA0143.3	15	0	+	0	0	.
chr12	53063833	53063834	chr12:53063834:C:T	rs12816417	C	T	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr12	53106231	53106232	chr12:53106232:G:A	rs7308602	G	A	A	Sox2_MA0143.3	23	0	+	0	0	.
chr12	53241650	53241651	chr12:53241651:G:A	rs34745537	G	A	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr12	53299893	53299894	chr12:53299894:A:C	chr12:53299894:A:C	A	C	A	Sox2_MA0143.3	-2	0	-	0	0	.
chr12	53379081	53379082	chr12:53379082:C:T	rs73311395	C	T	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr12	53570348	53570349	chr12:53570349:G:T	rs1247955	G	T	G	Sox2_MA0143.3	26	0	-	0	0	.
chr12	53746390	53746391	chr12:53746391:G:T	rs988335382	G	T	G	Sox2_MA0143.3	0	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr12	53757068	53757069	chr12:53757069:A:G	rs559320759	A	G	A	Sox2_MA0143.3	-13	0	-	0	0	.
chr12	53770495	53770496	chr12:53770496:T:C	chr12:53770496:T:C	T	C	T	Sox2_MA0143.3	25	0	-	0	0	.
chr12	53936656	53936657	chr12:53936657:G:T	rs1992563	G	T	G	Sox2_MA0143.3	-3	0	+	0	0	.
chr12	54032151	54032152	chr12:54032152:G:A	chr12:54032152:G:A	G	A	G	Sox2_MA0143.3	19	0	+	0	0	.
chr12	54034915	54034916	chr12:54034916:C:T	rs61921796	C	T	C	Sox2_MA0143.3	10	0	+	0	0	.
chr12	54075808	54075809	chr12:54075809:A:G	rs12310961	A	G	A	Sox2_MA0143.3	24	0	-	0	0	.
chr12	54142749	54142750	chr12:54142750:C:G	rs1872636	C	G	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr12	54159997	54159998	chr12:54159998:G:C	rs145209321	G	C	G	Sox2_MA0143.3	26	0	-	0	0	.
chr12	54164281	54164282	chr12:54164282:T:C	rs75607648	T	C	T	Sox2_MA0143.3	-1	0	-	0	0	.
chr12	54281142	54281143	chr12:54281143:C:T	rs117050488	C	T	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr12	54301690	54301691	chr12:54301691:C:T	chr12:54301691:C:T	C	T	C	Sox2_MA0143.3	7	1	+	9.206767037375712	9.800647049772198	CCTTTGTC
chr12	54338265	54338266	chr12:54338266:A:G	rs73314650	A	G	A	Sox2_MA0143.3	-17	0	+	0	0	.
chr12	54428196	54428197	chr12:54428197:G:A	rs1422570809	G	A	G	Sox2_MA0143.3	8	0	+	0	0	.
chr12	54433053	54433054	chr12:54433054:A:T	rs56690242	A	T	A	Sox2_MA0143.3	-11	0	-	0	0	.
chr12	54530361	54530362	chr12:54530362:C:T	rs34174834	C	T	C	Sox2_MA0143.3	23	0	-	0	0	.
chr12	54530395	54530396	chr12:54530396:G:A	rs12829100	G	A	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr12	54577562	54577563	chr12:54577563:C:G	rs1249951	C	G	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr12	54675413	54675414	chr12:54675414:A:G	rs1145014	A	G	G	Sox2_MA0143.3	-5	0	+	0	0	.
chr12	54684800	54684801	chr12:54684801:G:A	rs7296919	G	A	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr12	54829927	54829928	chr12:54829928:T:C	rs10876622	T	C	T	Sox2_MA0143.3	-13	0	+	0	0	.
chr12	54858417	54858418	chr12:54858418:C:T	rs1948139	C	T	T	Sox2_MA0143.3	-7	0	+	0	0	.
chr12	54878399	54878400	chr12:54878400:A:C	rs2887909	A	C	A	Sox2_MA0143.3	2	1	+	9.019595766176417	2.900948058900136	CCATTGTC
chr12	54942107	54942108	chr12:54942108:G:T	rs58685285	G	T	G	Sox2_MA0143.3	5	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr12	54948584	54948585	chr12:54948585:T:G	rs2264358	T	G	C	Sox2_MA0143.3	24	0	+	0	0	.
chr12	54998648	54998649	chr12:54998649:T:C	rs34835334	T	C	T	Sox2_MA0143.3	15	0	+	0	0	.
chr12	55072024	55072025	chr12:55072025:A:C	rs11838017	A	C	C	Sox2_MA0143.3	13	0	+	0	0	.
chr12	55193955	55193956	chr12:55193956:G:A	rs776427672	G	A	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr12	55319821	55319822	chr12:55319822:A:G	rs7974512	A	G	a	Sox2_MA0143.3	4	1	-	8.676919043985553	1.7681642646703322	CCATTGTG
chr12	55364886	55364887	chr12:55364887:A:G	rs7972297	A	G	-	Sox2_MA0143.3	21	0	-	0	0	.
chr12	55499978	55499979	chr12:55499979:T:C	rs11171508	T	C	t	Sox2_MA0143.3	18	0	+	0	0	.
chr12	55501753	55501754	chr12:55501754:C:T	rs7304684	C	T	c	Sox2_MA0143.3	-19	0	-	0	0	.
chr12	55548673	55548674	chr12:55548674:C:A	rs76126658	C	A	c	Sox2_MA0143.3	22	0	+	0	0	.
chr12	55662371	55662372	chr12:55662372:T:C	rs10876848	T	C	T	Sox2_MA0143.3	8	0	-	0	0	.
chr12	55721800	55721801	chr12:55721801:C:T	rs3138142	C	T	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr12	55746242	55746243	chr12:55746243:C:A	rs11829536	C	A	C	Sox2_MA0143.3	20	0	+	0	0	.
chr12	55804984	55804985	chr12:55804985:C:T	rs367866057	C	T	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr12	55839733	55839734	chr12:55839734:G:A	rs2291267	G	A	G	Sox2_MA0143.3	18	0	-	0	0	.
chr12	56040361	56040362	chr12:56040362:G:A	rs78865465	G	A	G	Sox2_MA0143.3	8	0	-	0	0	.
chr12	56162507	56162508	chr12:56162508:G:A	rs569980958	G	A	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr12	56224059	56224060	chr12:56224060:T:C	rs77394186	T	C	T	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr12	56224872	56224873	chr12:56224873:T:C	rs1355557059	T	C	T	Sox2_MA0143.3	3	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr12	56338888	56338889	chr12:56338889:G:A	rs1004438267	G	A	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr12	56350306	56350307	chr12:56350307:A:C	rs4759016	A	C	A	Sox2_MA0143.3	11	0	+	0	0	.
chr12	56684162	56684163	chr12:56684163:T:C	rs185099362	T	C	T	Sox2_MA0143.3	-8	0	-	0	0	.
chr12	56757719	56757720	chr12:56757720:A:C	rs77874486	A	C	A	Sox2_MA0143.3	8	0	+	0	0	.
chr12	56879208	56879209	chr12:56879209:G:A	rs9668268	G	A	-	Sox2_MA0143.3	14	0	+	0	0	.
chr12	56939440	56939441	chr12:56939441:A:T	rs1813813	A	T	A	Sox2_MA0143.3	19	0	-	0	0	.
chr12	56952594	56952595	chr12:56952595:G:A	rs901069	G	A	A	Sox2_MA0143.3	13	0	+	0	0	.
chr12	56957143	56957144	chr12:56957144:G:A	rs11172074	G	A	G	Sox2_MA0143.3	-5	0	+	0	0	.
chr12	57006474	57006475	chr12:57006475:G:C	chr12:57006475:G:C	G	C	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr12	57165282	57165283	chr12:57165283:C:T	rs117687310	C	T	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr12	57209166	57209167	chr12:57209167:C:G	rs142667784	C	G	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr12	57211018	57211019	chr12:57211019:A:G	rs1800164	A	G	A	Sox2_MA0143.3	25	0	-	0	0	.
chr12	57226470	57226471	chr12:57226471:G:A	rs11612551	G	A	G	Sox2_MA0143.3	8	0	+	0	0	.
chr12	57372608	57372609	chr12:57372609:G:C	rs4760254	G	C	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr12	57462709	57462710	chr12:57462710:A:G	rs78179158	A	G	A	Sox2_MA0143.3	12	0	+	0	0	.
chr12	57477771	57477772	chr12:57477772:A:G	rs3825080	A	G	A	Sox2_MA0143.3	2	1	+	9.019595766176417	2.900948058900136	CCATTGTC
chr12	57611898	57611899	chr12:57611899:G:A	rs60586224	G	A	G	Sox2_MA0143.3	15	0	-	0	0	.
chr12	57733617	57733618	chr12:57733618:G:A	rs111830825	G	A	G	Sox2_MA0143.3	24	0	+	0	0	.
chr12	57752992	57752993	chr12:57752993:C:A	rs3211607	C	A	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr12	57795459	57795460	chr12:57795460:A:G	rs117496119	A	G	A	Sox2_MA0143.3	23	0	-	0	0	.
chr12	57803447	57803448	chr12:57803448:G:T	rs60780489	G	T	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr12	57846629	57846630	chr12:57846630:G:C	rs7979384	G	C	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr12	58034293	58034294	chr12:58034294:G:C	rs10783866	G	C	G	Sox2_MA0143.3	16	0	+	0	0	.
chr12	58127774	58127775	chr12:58127775:T:G	rs12422573	T	G	T	Sox2_MA0143.3	-11	0	-	0	0	.
chr12	58413046	58413047	chr12:58413047:G:C	rs11172593	G	C	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr12	58444537	58444538	chr12:58444538:G:A	rs7963610	G	A	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr12	58502501	58502502	chr12:58502502:C:A	rs3913075	C	A	C	Sox2_MA0143.3	-5	0	-	0	0	.
chr12	58502510	58502511	chr12:58502511:G:T	rs980636049	G	T	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr12	58503293	58503294	chr12:58503294:A:G	rs11172637	A	G	A	Sox2_MA0143.3	13	0	-	0	0	.
chr12	58539468	58539469	chr12:58539469:G:A	rs3847744	G	A	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr12	58564852	58564853	chr12:58564853:A:G	rs10747812	A	G	G	Sox2_MA0143.3	24	0	+	0	0	.
chr12	58742119	58742120	chr12:58742120:T:C	rs1840681	T	C	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr12	58852120	58852121	chr12:58852121:G:A	rs12367116	G	A	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr12	59533268	59533269	chr12:59533269:A:G	rs12427401	A	G	-	Sox2_MA0143.3	-10	0	+	0	0	.
chr12	59570684	59570685	chr12:59570685:C:T	rs2132871	C	T	C	Sox2_MA0143.3	14	0	+	0	0	.
chr12	59578696	59578697	chr12:59578697:A:C	rs4760292	A	C	C	Sox2_MA0143.3	18	0	-	0	0	.
chr12	59733169	59733170	chr12:59733170:G:C	rs2711676	G	C	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr12	59808436	59808437	chr12:59808437:A:G	rs10437957	A	G	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr12	59874861	59874862	chr12:59874862:G:C	rs9645804	G	C	G	Sox2_MA0143.3	1	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr12	60156437	60156438	chr12:60156438:G:T	rs10784029	G	T	G	Sox2_MA0143.3	7	1	+	8.676919043985553	9.613475778572903	CCATTGTG
chr12	60415622	60415623	chr12:60415623:C:A	rs1857730	C	A	A	Sox2_MA0143.3	1	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr12	60494304	60494305	chr12:60494305:A:G	rs77883114	A	G	G	Sox2_MA0143.3	-16	0	-	0	0	.
chr12	60685406	60685407	chr12:60685407:C:T	rs114220313	C	T	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr12	60685415	60685416	chr12:60685416:T:C	rs79013108	T	C	T	Sox2_MA0143.3	-1	0	+	0	0	.
chr12	60685440	60685441	chr12:60685441:G:A	rs398549	G	A	G	Sox2_MA0143.3	24	0	+	0	0	.
chr12	60685441	60685442	chr12:60685442:C:T	rs369238	C	T	C	Sox2_MA0143.3	25	0	+	0	0	.
chr12	60835037	60835038	chr12:60835038:A:G	rs117015849	A	G	A	Sox2_MA0143.3	-20	0	-	0	0	.
chr12	61166256	61166257	chr12:61166257:C:T	rs7979862	C	T	T	Sox2_MA0143.3	19	0	-	0	0	.
chr12	61333897	61333898	chr12:61333898:T:C	rs4024193	T	C	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr12	61467520	61467521	chr12:61467521:C:A	rs11174029	C	A	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr12	61467555	61467556	chr12:61467556:C:T	rs11174030	C	T	C	Sox2_MA0143.3	17	0	+	0	0	.
chr12	62051936	62051937	chr12:62051937:A:G	rs928216592	A	G	A	Sox2_MA0143.3	-7	0	+	0	0	.
chr12	62105355	62105356	chr12:62105356:T:C	rs17713954	T	C	T	Sox2_MA0143.3	3	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr12	62257317	62257318	chr12:62257318:T:C	rs10747954	T	C	C	Sox2_MA0143.3	13	0	+	0	0	.
chr12	62375896	62375897	chr12:62375897:G:C	chr12:62375897:G:C	G	C	G	Sox2_MA0143.3	5	1	+	9.613475778572903	2.7047209992576837	CCATTGTT
chr12	62379340	62379341	chr12:62379341:A:G	rs56277058	A	G	A	Sox2_MA0143.3	-9	0	-	0	0	.
chr12	62481906	62481907	chr12:62481907:A:G	rs73139098	A	G	A	Sox2_MA0143.3	10	0	-	0	0	.
chr12	62523034	62523035	chr12:62523035:A:G	rs79122786	A	G	A	Sox2_MA0143.3	19	0	+	0	0	.
chr12	62603788	62603789	chr12:62603789:C:T	rs766127565	C	T	C	Sox2_MA0143.3	15	0	-	0	0	.
chr12	62635917	62635918	chr12:62635918:T:G	rs79406471	T	G	T	Sox2_MA0143.3	-20	0	-	0	0	.
chr12	62653897	62653898	chr12:62653898:C:T	rs10877904	C	T	C	Sox2_MA0143.3	15	0	+	0	0	.
chr12	62701648	62701649	chr12:62701649:C:T	rs11174607	C	T	C	Sox2_MA0143.3	15	0	-	0	0	.
chr12	62720713	62720714	chr12:62720714:T:C	rs77777493	T	C	T	Sox2_MA0143.3	13	0	-	0	0	.
chr12	62720729	62720730	chr12:62720730:T:C	rs342171	T	C	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr12	62783953	62783954	chr12:62783954:G:A	rs546913975	G	A	G	Sox2_MA0143.3	23	0	-	0	0	.
chr12	62783994	62783995	chr12:62783995:G:T	rs78613237	G	T	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr12	62783995	62783996	chr12:62783996:C:T	rs79546352	C	T	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr12	63349906	63349907	chr12:63349907:A:G	rs699623	A	G	G	Sox2_MA0143.3	24	0	-	0	0	.
chr12	63420417	63420418	chr12:63420418:A:T	rs557955	A	T	T	Sox2_MA0143.3	14	0	-	0	0	.
chr12	63423076	63423077	chr12:63423077:C:T	rs11174966	C	T	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr12	63474646	63474647	chr12:63474647:T:C	rs1733696	T	C	T	Sox2_MA0143.3	26	0	-	0	0	.
chr12	63474651	63474652	chr12:63474652:G:A	rs494931	G	A	G	Sox2_MA0143.3	21	0	-	0	0	.
chr12	63584615	63584616	chr12:63584616:C:G	rs7976364	C	G	G	Sox2_MA0143.3	23	0	+	0	0	.
chr12	63655967	63655968	chr12:63655968:C:T	rs61935160	C	T	C	Sox2_MA0143.3	16	0	+	0	0	.
chr12	63714172	63714173	chr12:63714173:T:A	rs2175709	T	A	A	Sox2_MA0143.3	26	0	+	0	0	.
chr12	63845789	63845790	chr12:63845790:A:G	rs111862365	A	G	A	Sox2_MA0143.3	6	1	-	9.019595766176417	2.110840986861197	CCATTGTC
chr12	63931873	63931874	chr12:63931874:G:A	rs11175211	G	A	G	Sox2_MA0143.3	-16	0	-	0	0	.
chr12	63978903	63978904	chr12:63978904:T:C	rs35228936	T	C	T	Sox2_MA0143.3	-12	0	+	0	0	.
chr12	63978910	63978911	chr12:63978911:G:T	rs770272943	G	T	G	Sox2_MA0143.3	-5	0	+	0	0	.
chr12	64006200	64006201	chr12:64006201:T:C	chr12:64006201:T:C	T	C	T	Sox2_MA0143.3	-20	0	-	0	0	.
chr12	64035413	64035414	chr12:64035414:G:A	rs1456046	G	A	G	Sox2_MA0143.3	21	0	+	0	0	.
chr12	64056614	64056615	chr12:64056615:C:A	rs1162788	C	A	A	Sox2_MA0143.3	-18	0	+	0	0	.
chr12	64320723	64320724	chr12:64320724:G:T	rs11175339	G	T	T	Sox2_MA0143.3	18	0	+	0	0	.
chr12	64333050	64333051	chr12:64333051:G:A	rs1025355082	G	A	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr12	64390017	64390018	chr12:64390018:G:T	rs11175376	G	T	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr12	64404142	64404143	chr12:64404143:T:C	rs7961632	T	C	T	Sox2_MA0143.3	3	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr12	64473608	64473609	chr12:64473609:G:A	rs573807159	G	A	G	Sox2_MA0143.3	7	1	+	8.676919043985553	3.3675628303222993	CCATTGTG
chr12	64549441	64549442	chr12:64549442:T:A	rs7970071	T	A	T	Sox2_MA0143.3	14	0	+	0	0	.
chr12	64619170	64619171	chr12:64619171:A:T	rs117458648	A	T	A	Sox2_MA0143.3	21	0	+	0	0	.
chr12	64648049	64648050	chr12:64648050:G:A	rs11175500	G	A	A	Sox2_MA0143.3	19	0	+	0	0	.
chr12	64891164	64891165	chr12:64891165:A:G	rs114924474	A	G	A	Sox2_MA0143.3	-16	0	+	0	0	.
chr12	64900784	64900785	chr12:64900785:G:A	rs79756910	G	A	G	Sox2_MA0143.3	18	0	-	0	0	.
chr12	64992564	64992565	chr12:64992565:T:C	rs3741739	T	C	T	Sox2_MA0143.3	-12	0	+	0	0	.
chr12	65093835	65093836	chr12:65093836:A:G	rs59756710	A	G	A	Sox2_MA0143.3	-9	0	+	0	0	.
chr12	65152893	65152894	chr12:65152894:A:G	rs1391742	A	G	A	Sox2_MA0143.3	-14	0	+	0	0	.
chr12	65612501	65612502	chr12:65612502:G:A	rs80111982	G	A	G	Sox2_MA0143.3	10	0	+	0	0	.
chr12	65720697	65720698	chr12:65720698:G:A	rs10784490	G	A	A	Sox2_MA0143.3	-8	0	+	0	0	.
chr12	65963219	65963220	chr12:65963220:T:C	rs57800850	T	C	T	Sox2_MA0143.3	-9	0	+	0	0	.
chr12	66107635	66107636	chr12:66107636:G:A	rs113647203	G	A	G	Sox2_MA0143.3	7	1	-	9.019595766176417	9.613475778572903	CCATTGTC
chr12	66107649	66107650	chr12:66107650:T:G	rs541891776	T	G	T	Sox2_MA0143.3	-7	0	-	0	0	.
chr12	66240127	66240128	chr12:66240128:A:G	rs1152912	A	G	a	Sox2_MA0143.3	-8	0	-	0	0	.
chr12	66273096	66273097	chr12:66273097:T:A	rs7959802	T	A	A	Sox2_MA0143.3	20	0	-	0	0	.
chr12	66273112	66273113	chr12:66273113:A:G	rs7972934	A	G	A	Sox2_MA0143.3	4	1	-	3.5547341015215945	-3.3540206777936254	CCTTTGTA
chr12	66388631	66388632	chr12:66388632:A:G	rs2088170	A	G	A	Sox2_MA0143.3	-3	0	-	0	0	.
chr12	66461919	66461920	chr12:66461920:A:G	rs10219665	A	G	A	Sox2_MA0143.3	6	1	-	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr12	66590190	66590191	chr12:66590191:A:T	rs7958527	A	T	T	Sox2_MA0143.3	-4	0	-	0	0	.
chr12	66627767	66627768	chr12:66627768:G:T	rs56244804	G	T	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr12	66654632	66654633	chr12:66654633:A:G	rs73128817	A	G	A	Sox2_MA0143.3	9	0	-	0	0	.
chr12	66740393	66740394	chr12:66740394:C:G	rs2127535	C	G	C	Sox2_MA0143.3	21	0	-	0	0	.
chr12	66860113	66860114	chr12:66860114:C:T	rs11176459	C	T	T	Sox2_MA0143.3	-16	0	+	0	0	.
chr12	66951609	66951610	chr12:66951610:C:G	rs12819288	C	G	G	Sox2_MA0143.3	12	0	-	0	0	.
chr12	67042964	67042965	chr12:67042965:A:G	rs1008948	A	G	A	Sox2_MA0143.3	27	0	-	0	0	.
chr12	67057002	67057003	chr12:67057003:G:A	rs61917787	G	A	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr12	67103640	67103641	chr12:67103641:G:A	rs114403114	G	A	G	Sox2_MA0143.3	8	0	+	0	0	.
chr12	67137454	67137455	chr12:67137455:C:A	rs73320950	C	A	C	Sox2_MA0143.3	5	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr12	67237463	67237464	chr12:67237464:T:C	rs1252436	T	C	C	Sox2_MA0143.3	6	1	+	9.206767037375712	2.298012258060492	CCTTTGTC
chr12	67277018	67277019	chr12:67277019:A:G	rs189325764	A	G	G	Sox2_MA0143.3	3	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr12	67356078	67356079	chr12:67356079:C:T	rs1033816061	C	T	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr12	67411167	67411168	chr12:67411168:C:T	rs3970791	C	T	C	Sox2_MA0143.3	9	0	+	0	0	.
chr12	67650138	67650139	chr12:67650139:A:C	rs188476944	A	C	A	Sox2_MA0143.3	-1	0	-	0	0	.
chr12	67672251	67672252	chr12:67672252:C:T	rs1871564	C	T	C	Sox2_MA0143.3	17	0	-	0	0	.
chr12	67701526	67701527	chr12:67701527:T:G	rs12825787	T	G	T	Sox2_MA0143.3	-13	0	+	0	0	.
chr12	67701539	67701540	chr12:67701540:C:T	rs11835149	C	T	C	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr12	67725583	67725584	chr12:67725584:C:T	rs10878648	C	T	C	Sox2_MA0143.3	27	0	-	0	0	.
chr12	67748588	67748589	chr12:67748589:G:T	rs4913359	G	T	G	Sox2_MA0143.3	1	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr12	67750969	67750970	chr12:67750970:A:G	rs74721765	A	G	A	Sox2_MA0143.3	26	0	-	0	0	.
chr12	67911948	67911949	chr12:67911949:A:C	rs11176942	A	C	A	Sox2_MA0143.3	14	0	-	0	0	.
chr12	67981845	67981846	chr12:67981846:T:C	rs11176992	T	C	T	Sox2_MA0143.3	-13	0	+	0	0	.
chr12	67982422	67982423	chr12:67982423:C:T	rs4141137	C	T	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr12	68001603	68001604	chr12:68001604:G:A	rs118114411	G	A	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr12	68038090	68038091	chr12:68038091:C:G	rs11177017	C	G	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr12	68106458	68106459	chr12:68106459:C:T	rs1005048	C	T	C	Sox2_MA0143.3	23	0	+	0	0	.
chr12	68148760	68148761	chr12:68148761:G:A	rs11177072	G	A	G	Sox2_MA0143.3	27	0	+	0	0	.
chr12	68200995	68200996	chr12:68200996:G:T	rs4913419	G	T	T	Sox2_MA0143.3	12	0	-	0	0	.
chr12	68271717	68271718	chr12:68271718:T:C	rs80279761	T	C	T	Sox2_MA0143.3	25	0	+	0	0	.
chr12	68329337	68329338	chr12:68329338:C:G	rs10878808	C	G	C	Sox2_MA0143.3	16	0	+	0	0	.
chr12	68392216	68392217	chr12:68392217:C:T	rs435629	C	T	T	Sox2_MA0143.3	10	0	-	0	0	.
chr12	68482438	68482439	chr12:68482439:T:A	rs76763720	T	A	T	Sox2_MA0143.3	23	0	+	0	0	.
chr12	68484467	68484468	chr12:68484468:A:C	rs1160190	A	C	-	Sox2_MA0143.3	-13	0	-	0	0	.
chr12	68634393	68634394	chr12:68634394:G:A	rs187470566	G	A	g	Sox2_MA0143.3	1	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr12	68686606	68686607	chr12:68686607:G:A	rs76966231	G	A	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr12	68686614	68686615	chr12:68686615:G:A	chr12:68686615:G:A	G	A	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr12	68810796	68810797	chr12:68810797:A:G	rs182429573	A	G	A	Sox2_MA0143.3	-6	0	+	0	0	.
chr12	68856767	68856768	chr12:68856768:C:T	rs3741598	C	T	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr12	68880917	68880918	chr12:68880918:C:T	rs116998035	C	T	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr12	69000299	69000300	chr12:69000300:G:A	rs1908676	G	A	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr12	69058664	69058665	chr12:69058665:T:C	rs73152729	T	C	T	Sox2_MA0143.3	-2	0	+	0	0	.
chr12	69151671	69151672	chr12:69151672:G:A	rs117787389	G	A	G	Sox2_MA0143.3	-2	0	+	0	0	.
chr12	69254243	69254244	chr12:69254244:C:T	rs560482803	C	T	C	Sox2_MA0143.3	1	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr12	69357774	69357775	chr12:69357775:A:G	rs562905741	A	G	A	Sox2_MA0143.3	4	1	-	3.5547341015215945	-3.3540206777936254	CCTTTGTA
chr12	69555617	69555618	chr12:69555618:G:A	rs968452335	G	A	G	Sox2_MA0143.3	21	0	-	0	0	.
chr12	69555619	69555620	chr12:69555620:G:A	rs4761243	G	A	g	Sox2_MA0143.3	19	0	-	0	0	.
chr12	69570090	69570091	chr12:69570091:C:A	rs497758	C	A	A	Sox2_MA0143.3	1	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr12	69630307	69630308	chr12:69630308:A:T	rs710744	A	T	A	Sox2_MA0143.3	22	0	+	0	0	.
chr12	69648820	69648821	chr12:69648821:C:G	rs4761253	C	G	C	Sox2_MA0143.3	0	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr12	69648846	69648847	chr12:69648847:G:A	rs11613497	G	A	G	Sox2_MA0143.3	26	0	+	0	0	.
chr12	69690355	69690356	chr12:69690356:T:G	rs775420	T	G	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr12	69714435	69714436	chr12:69714436:G:A	rs61928142	G	A	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr12	69841014	69841015	chr12:69841015:T:C	rs6581907	T	C	T	Sox2_MA0143.3	15	0	-	0	0	.
chr12	69896751	69896752	chr12:69896752:C:G	rs10879033	C	G	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr12	69898208	69898209	chr12:69898209:G:A	rs187198561	G	A	G	Sox2_MA0143.3	24	0	-	0	0	.
chr12	69908486	69908487	chr12:69908487:G:A	rs148175631	G	A	G	Sox2_MA0143.3	8	0	-	0	0	.
chr12	69910982	69910983	chr12:69910983:C:T	rs74101388	C	T	C	Sox2_MA0143.3	22	0	-	0	0	.
chr12	69919382	69919383	chr12:69919383:G:A	rs1152970	G	A	G	Sox2_MA0143.3	10	0	-	0	0	.
chr12	69919392	69919393	chr12:69919393:G:A	rs10879055	G	A	G	Sox2_MA0143.3	0	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr12	69952267	69952268	chr12:69952268:A:G	rs76314993	A	G	A	Sox2_MA0143.3	6	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr12	70049612	70049613	chr12:70049613:C:T	rs7960335	C	T	C	Sox2_MA0143.3	18	0	-	0	0	.
chr12	70053098	70053099	chr12:70053099:T:G	chr12:70053099:T:G	T	G	T	Sox2_MA0143.3	-17	0	-	0	0	.
chr12	70101177	70101178	chr12:70101178:G:A	rs61929271	G	A	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr12	70145639	70145640	chr12:70145640:T:A	rs7958131	T	A	T	Sox2_MA0143.3	-15	0	-	0	0	.
chr12	70367746	70367747	chr12:70367747:A:C	rs183733206	A	C	A	Sox2_MA0143.3	17	0	+	0	0	.
chr12	70369387	70369388	chr12:70369388:A:C	rs2172869	A	C	A	Sox2_MA0143.3	-13	0	+	0	0	.
chr12	70396040	70396041	chr12:70396041:G:T	rs787937	G	T	G	Sox2_MA0143.3	20	0	-	0	0	.
chr12	70398996	70398997	chr12:70398997:C:T	rs12582436	C	T	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr12	70429109	70429110	chr12:70429110:A:G	rs145888663	A	G	A	Sox2_MA0143.3	-4	0	+	0	0	.
chr12	70434674	70434675	chr12:70434675:C:T	rs10784846	C	T	C	Sox2_MA0143.3	12	0	+	0	0	.
chr12	70717826	70717827	chr12:70717827:A:G	rs11178377	A	G	A	Sox2_MA0143.3	-9	0	-	0	0	.
chr12	70824747	70824748	chr12:70824748:T:C	rs907755	T	C	T	Sox2_MA0143.3	21	0	+	0	0	.
chr12	70852715	70852716	chr12:70852716:C:G	rs7961271	C	G	G	Sox2_MA0143.3	0	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr12	70948515	70948516	chr12:70948516:G:A	rs34475547	G	A	A	Sox2_MA0143.3	-10	0	+	0	0	.
chr12	71024566	71024567	chr12:71024567:A:G	rs1913196	A	G	A	Sox2_MA0143.3	26	0	-	0	0	.
chr12	71069763	71069764	chr12:71069764:G:A	rs11178583	G	A	G	Sox2_MA0143.3	25	0	-	0	0	.
chr12	71163871	71163872	chr12:71163872:C:T	rs7302609	C	T	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr12	71163873	71163874	chr12:71163874:C:T	rs74102110	C	T	C	Sox2_MA0143.3	0	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr12	71250379	71250380	chr12:71250380:C:T	rs11178702	C	T	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr12	71524745	71524746	chr12:71524746:G:A	rs74662384	G	A	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr12	71525084	71525085	chr12:71525085:C:A	rs118086634	C	A	C	Sox2_MA0143.3	0	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr12	71536538	71536539	chr12:71536539:T:C	rs55992737	T	C	T	Sox2_MA0143.3	17	0	+	0	0	.
chr12	71780336	71780337	chr12:71780337:T:C	rs11830831	T	C	T	Sox2_MA0143.3	-20	0	+	0	0	.
chr12	71780372	71780373	chr12:71780373:T:C	rs328756	T	C	T	Sox2_MA0143.3	16	0	+	0	0	.
chr12	72072670	72072671	chr12:72072671:A:C	rs115268012	A	C	A	Sox2_MA0143.3	15	0	-	0	0	.
chr12	72606478	72606479	chr12:72606479:G:A	rs1347196	G	A	A	Sox2_MA0143.3	26	0	+	0	0	.
chr12	72754266	72754267	chr12:72754267:A:G	rs376841160	A	G	A	Sox2_MA0143.3	-14	0	+	0	0	.
chr12	72825746	72825747	chr12:72825747:A:G	rs10784994	A	G	A	Sox2_MA0143.3	8	0	-	0	0	.
chr12	73105437	73105438	chr12:73105438:A:T	rs67082071	A	T	T	Sox2_MA0143.3	3	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr12	73266225	73266226	chr12:73266226:A:G	rs66493228	A	G	A	Sox2_MA0143.3	17	0	+	0	0	.
chr12	73266459	73266460	chr12:73266460:G:A	rs7314746	G	A	A	Sox2_MA0143.3	-1	0	+	0	0	.
chr12	73424727	73424728	chr12:73424728:C:T	rs10879599	C	T	C	Sox2_MA0143.3	20	0	-	0	0	.
chr12	73460314	73460315	chr12:73460315:A:G	rs2176880	A	G	A	Sox2_MA0143.3	-16	0	+	0	0	.
chr12	73645462	73645463	chr12:73645463:C:A	rs1156727	C	A	A	Sox2_MA0143.3	23	0	-	0	0	.
chr12	73863682	73863683	chr12:73863683:T:C	rs111755252	T	C	T	Sox2_MA0143.3	6	1	+	9.206767037375712	2.298012258060492	CCTTTGTC
chr12	73863684	73863685	chr12:73863685:A:G	rs73170230	A	G	A	Sox2_MA0143.3	8	0	+	0	0	.
chr12	74018903	74018904	chr12:74018904:T:G	rs12426724	T	G	G	Sox2_MA0143.3	13	0	+	0	0	.
chr12	74292738	74292739	chr12:74292739:A:G	rs73350831	A	G	A	Sox2_MA0143.3	23	0	-	0	0	.
chr12	74538327	74538328	chr12:74538328:C:T	rs373071202	C	T	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr12	74817540	74817541	chr12:74817541:T:C	rs150401989	T	C	T	Sox2_MA0143.3	-16	0	+	0	0	.
chr12	74846366	74846367	chr12:74846367:A:G	rs11180251	A	G	G	Sox2_MA0143.3	9	0	-	0	0	.
chr12	75390992	75390993	chr12:75390993:C:T	rs7978856	C	T	C	Sox2_MA0143.3	11	0	+	0	0	.
chr12	75391003	75391004	chr12:75391004:C:T	rs1293623758	C	T	C	Sox2_MA0143.3	22	0	+	0	0	.
chr12	75433167	75433168	chr12:75433168:A:G	rs11180510	A	G	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr12	75438287	75438288	chr12:75438288:T:A	rs11180517	T	A	T	Sox2_MA0143.3	-15	0	+	0	0	.
chr12	75484970	75484971	chr12:75484971:A:G	rs10879922	A	G	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr12	75589809	75589810	chr12:75589810:C:T	rs10879935	C	T	C	Sox2_MA0143.3	16	0	+	0	0	.
chr12	75630533	75630534	chr12:75630534:A:G	rs7962276	A	G	A	Sox2_MA0143.3	20	0	-	0	0	.
chr12	75711072	75711073	chr12:75711073:A:C	rs12812846	A	C	A	Sox2_MA0143.3	24	0	-	0	0	.
chr12	75714533	75714534	chr12:75714534:G:A	rs6582297	G	A	A	Sox2_MA0143.3	-19	0	+	0	0	.
chr12	75714549	75714550	chr12:75714550:C:T	rs75162752	C	T	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr12	75722813	75722814	chr12:75722814:C:T	rs73371369	C	T	t	Sox2_MA0143.3	-4	0	+	0	0	.
chr12	75722833	75722834	chr12:75722834:G:A	rs757518790	G	A	g	Sox2_MA0143.3	16	0	+	0	0	.
chr12	75751532	75751533	chr12:75751533:C:T	rs1389482	C	T	T	Sox2_MA0143.3	-14	0	+	0	0	.
chr12	75844873	75844874	chr12:75844874:A:G	rs7309074	A	G	G	Sox2_MA0143.3	24	0	-	0	0	.
chr12	75859417	75859418	chr12:75859418:T:C	rs2701612	T	C	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr12	75877736	75877737	chr12:75877737:A:T	rs3926586	A	T	T	Sox2_MA0143.3	-12	0	-	0	0	.
chr12	76283827	76283828	chr12:76283828:C:T	rs11106425	C	T	T	Sox2_MA0143.3	-10	0	+	0	0	.
chr12	76291565	76291566	chr12:76291566:C:A	chr12:76291566:C:A	C	A	C	Sox2_MA0143.3	12	0	+	0	0	.
chr12	76413269	76413270	chr12:76413270:A:T	rs35295266	A	T	A	Sox2_MA0143.3	-6	0	+	0	0	.
chr12	76591519	76591520	chr12:76591520:C:T	rs142727313	C	T	C	Sox2_MA0143.3	23	0	+	0	0	.
chr12	76621714	76621715	chr12:76621715:T:C	rs1553943	T	C	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr12	76621722	76621723	chr12:76621723:G:C	chr12:76621723:G:C	G	C	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr12	76681258	76681259	chr12:76681259:C:G	rs12303120	C	G	C	Sox2_MA0143.3	22	0	+	0	0	.
chr12	77063067	77063068	chr12:77063068:C:T	rs542346424	C	T	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr12	77063092	77063093	chr12:77063093:G:A	chr12:77063093:G:A	G	A	G	Sox2_MA0143.3	10	0	+	0	0	.
chr12	77070638	77070639	chr12:77070639:A:G	rs310862	A	G	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr12	77161546	77161547	chr12:77161547:A:G	rs12823431	A	G	A	Sox2_MA0143.3	8	0	-	0	0	.
chr12	77257217	77257218	chr12:77257218:C:G	rs11104494	C	G	C	Sox2_MA0143.3	19	0	+	0	0	.
chr12	77294215	77294216	chr12:77294216:A:G	rs1716535	A	G	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr12	77339811	77339812	chr12:77339812:C:G	rs12297357	C	G	C	Sox2_MA0143.3	19	0	-	0	0	.
chr12	77349875	77349876	chr12:77349876:G:A	rs17043415	G	A	G	Sox2_MA0143.3	25	0	+	0	0	.
chr12	77372550	77372551	chr12:77372551:T:C	rs1405543	T	C	C	Sox2_MA0143.3	4	1	+	9.206767037375712	2.2980122580604916	CCTTTGTC
chr12	77494511	77494512	chr12:77494512:A:C	rs4761383	A	C	A	Sox2_MA0143.3	9	0	-	0	0	.
chr12	77549372	77549373	chr12:77549373:C:A	rs696421	C	A	A	Sox2_MA0143.3	-10	0	-	0	0	.
chr12	77549377	77549378	chr12:77549378:C:A	rs12816243	C	A	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr12	77585069	77585070	chr12:77585070:A:G	rs696447	A	G	A	Sox2_MA0143.3	2	1	+	9.613475778572903	3.494828071296623	CCATTGTT
chr12	77667666	77667667	chr12:77667667:C:T	rs11106195	C	T	C	Sox2_MA0143.3	25	0	-	0	0	.
chr12	77694973	77694974	chr12:77694974:G:A	rs117772237	G	A	G	Sox2_MA0143.3	25	0	-	0	0	.
chr12	77723196	77723197	chr12:77723197:A:G	rs1527793	A	G	A	Sox2_MA0143.3	-18	0	-	0	0	.
chr12	77995579	77995580	chr12:77995580:G:A	rs17044677	G	A	G	Sox2_MA0143.3	25	0	+	0	0	.
chr12	78062971	78062972	chr12:78062972:A:G	rs141048439	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr12	78063890	78063891	chr12:78063891:T:C	rs300412	T	C	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr12	78103000	78103001	chr12:78103001:G:A	rs7957819	G	A	G	Sox2_MA0143.3	5	1	+	9.019595766176417	2.110840986861197	CCATTGTC
chr12	78193881	78193882	chr12:78193882:A:G	rs300504	A	G	a	Sox2_MA0143.3	-3	0	+	0	0	.
chr12	78194602	78194603	chr12:78194603:A:T	rs300500	A	T	a	Sox2_MA0143.3	-6	0	+	0	0	.
chr12	78258064	78258065	chr12:78258065:A:G	rs7962123	A	G	G	Sox2_MA0143.3	-14	0	+	0	0	.
chr12	78789160	78789161	chr12:78789161:A:G	rs35701235	A	G	A	Sox2_MA0143.3	-13	0	+	0	0	.
chr12	78802657	78802658	chr12:78802658:A:G	chr12:78802658:A:G	A	G	A	Sox2_MA0143.3	-20	0	+	0	0	.
chr12	78802701	78802702	chr12:78802702:T:C	rs12831061	T	C	C	Sox2_MA0143.3	24	0	+	0	0	.
chr12	78951800	78951801	chr12:78951801:A:G	rs17046098	A	G	G	Sox2_MA0143.3	10	0	+	0	0	.
chr12	78964115	78964116	chr12:78964116:A:G	rs17204658	A	G	A	Sox2_MA0143.3	23	0	-	0	0	.
chr12	79274622	79274623	chr12:79274623:G:C	rs189541720	G	C	G	Sox2_MA0143.3	10	0	-	0	0	.
chr12	79323187	79323188	chr12:79323188:C:T	rs116692510	C	T	C	Sox2_MA0143.3	24	0	-	0	0	.
chr12	79400777	79400778	chr12:79400778:G:T	rs7138514	G	T	T	Sox2_MA0143.3	22	0	+	0	0	.
chr12	80157697	80157698	chr12:80157698:C:G	rs1919591	C	G	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr12	80268993	80268994	chr12:80268994:C:G	rs115405839	C	G	C	Sox2_MA0143.3	1	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr12	80352611	80352612	chr12:80352612:A:G	rs138737576	A	G	A	Sox2_MA0143.3	-9	0	+	0	0	.
chr12	80707797	80707798	chr12:80707798:G:A	rs147184101	G	A	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr12	80864859	80864860	chr12:80864860:C:T	rs1920995	C	T	T	Sox2_MA0143.3	8	0	+	0	0	.
chr12	81086566	81086567	chr12:81086567:A:G	rs17008008	A	G	A	Sox2_MA0143.3	-8	0	-	0	0	.
chr12	81200938	81200939	chr12:81200939:T:C	rs10746184	T	C	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr12	81205647	81205648	chr12:81205648:T:C	rs78750229	T	C	T	Sox2_MA0143.3	-19	0	+	0	0	.
chr12	81208669	81208670	chr12:81208670:A:G	rs1921035	A	G	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr12	81223192	81223193	chr12:81223193:C:T	rs1921065	C	T	T	Sox2_MA0143.3	-13	0	+	0	0	.
chr12	81224808	81224809	chr12:81224809:C:T	rs1921067	C	T	C	Sox2_MA0143.3	13	0	+	0	0	.
chr12	81224945	81224946	chr12:81224946:C:G	rs1921068	C	G	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr12	81758710	81758711	chr12:81758711:G:A	rs181968757	G	A	G	Sox2_MA0143.3	12	0	+	0	0	.
chr12	81759631	81759632	chr12:81759632:G:C	rs548537807	G	C	G	Sox2_MA0143.3	23	0	-	0	0	.
chr12	81759633	81759634	chr12:81759634:C:A	rs567258840	C	A	C	Sox2_MA0143.3	21	0	-	0	0	.
chr12	81779471	81779472	chr12:81779472:T:A	rs11613196	T	A	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr12	81790639	81790640	chr12:81790640:T:C	rs7954438	T	C	C	Sox2_MA0143.3	2	1	+	8.864090315184848	2.5582713367092715	CCTTTGTG
chr12	81824994	81824995	chr12:81824995:G:A	rs74595259	G	A	G	Sox2_MA0143.3	11	0	-	0	0	.
chr12	81909497	81909498	chr12:81909498:G:A	rs4100198	G	A	A	Sox2_MA0143.3	0	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr12	82102893	82102894	chr12:82102894:G:A	rs79719968	G	A	A	Sox2_MA0143.3	-17	0	+	0	0	.
chr12	82102906	82102907	chr12:82102907:C:A	rs76214218	C	A	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr12	82106969	82106970	chr12:82106970:C:T	rs4309227	C	T	C	Sox2_MA0143.3	26	0	+	0	0	.
chr12	82277534	82277535	chr12:82277535:C:T	rs11115240	C	T	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr12	82412443	82412444	chr12:82412444:T:C	rs143557016	T	C	T	Sox2_MA0143.3	14	0	+	0	0	.
chr12	82425358	82425359	chr12:82425359:A:G	rs4411333	A	G	A	Sox2_MA0143.3	18	0	+	0	0	.
chr12	82426552	82426553	chr12:82426553:C:T	rs553819872	C	T	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr12	82625715	82625716	chr12:82625716:C:T	rs11115323	C	T	T	Sox2_MA0143.3	-1	0	-	0	0	.
chr12	82652174	82652175	chr12:82652175:C:A	rs10506877	C	A	A	Sox2_MA0143.3	16	0	-	0	0	.
chr12	82775152	82775153	chr12:82775153:T:G	rs10047600	T	G	T	Sox2_MA0143.3	17	0	+	0	0	.
chr12	82931750	82931751	chr12:82931751:G:A	rs10746261	G	A	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr12	83001083	83001084	chr12:83001084:C:T	rs10746263	C	T	T	Sox2_MA0143.3	20	0	-	0	0	.
chr12	83092263	83092264	chr12:83092264:C:G	rs59795570	C	G	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr12	83384639	83384640	chr12:83384640:G:C	rs61930933	G	C	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr12	83613454	83613455	chr12:83613455:A:G	rs990646	A	G	G	Sox2_MA0143.3	2	1	+	9.613475778572903	3.494828071296623	CCATTGTT
chr12	83826767	83826768	chr12:83826768:G:A	rs1599260	G	A	A	Sox2_MA0143.3	10	0	+	0	0	.
chr12	84475564	84475565	chr12:84475565:G:C	rs67571403	G	C	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr12	84507175	84507176	chr12:84507176:G:C	rs979879	G	C	G	Sox2_MA0143.3	8	0	-	0	0	.
chr12	84734200	84734201	chr12:84734201:G:A	rs12319548	G	A	G	Sox2_MA0143.3	21	0	-	0	0	.
chr12	84786439	84786440	chr12:84786440:G:A	rs1452236	G	A	A	Sox2_MA0143.3	-13	0	-	0	0	.
chr12	84910638	84910639	chr12:84910639:T:C	rs112643518	T	C	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr12	85016587	85016588	chr12:85016588:T:G	rs887740424	T	G	T	Sox2_MA0143.3	25	0	-	0	0	.
chr12	85041655	85041656	chr12:85041656:A:G	rs1852148	A	G	G	Sox2_MA0143.3	-16	0	-	0	0	.
chr12	85179020	85179021	chr12:85179021:G:T	rs12823090	G	T	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr12	85641744	85641745	chr12:85641745:G:A	rs11835161	G	A	A	Sox2_MA0143.3	17	0	+	0	0	.
chr12	85691120	85691121	chr12:85691121:A:G	rs4897839	A	G	A	Sox2_MA0143.3	12	0	-	0	0	.
chr12	85751180	85751181	chr12:85751181:A:G	rs61930016	A	G	A	Sox2_MA0143.3	3	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr12	85849503	85849504	chr12:85849504:A:G	rs7957170	A	G	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr12	85867855	85867856	chr12:85867856:C:G	rs61930878	C	G	C	Sox2_MA0143.3	8	0	+	0	0	.
chr12	86015468	86015469	chr12:86015469:A:T	rs73187675	A	T	A	Sox2_MA0143.3	-11	0	+	0	0	.
chr12	86555460	86555461	chr12:86555461:G:C	rs144671853	G	C	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr12	86671379	86671380	chr12:86671380:T:G	rs994288	T	G	T	Sox2_MA0143.3	12	0	-	0	0	.
chr12	86934146	86934147	chr12:86934147:A:T	rs10858531	A	T	A	Sox2_MA0143.3	12	0	+	0	0	.
chr12	86950532	86950533	chr12:86950533:C:T	rs35395565	C	T	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr12	87127638	87127639	chr12:87127639:G:C	rs148990788	G	C	G	Sox2_MA0143.3	23	0	-	0	0	.
chr12	87323670	87323671	chr12:87323671:C:T	rs190580663	C	T	C	Sox2_MA0143.3	20	0	+	0	0	.
chr12	87432740	87432741	chr12:87432741:G:A	rs11537484	G	A	G	Sox2_MA0143.3	27	0	-	0	0	.
chr12	87451520	87451521	chr12:87451521:A:T	rs11104491	A	T	A	Sox2_MA0143.3	-18	0	-	0	0	.
chr12	87662021	87662022	chr12:87662022:T:C	rs78446050	T	C	T	Sox2_MA0143.3	-6	0	-	0	0	.
chr12	87750180	87750181	chr12:87750181:G:C	rs73200863	G	C	.	Sox2_MA0143.3	-12	0	-	0	0	.
chr12	87756873	87756874	chr12:87756874:T:C	rs2669116	T	C	.	Sox2_MA0143.3	-19	0	-	0	0	.
chr12	87821032	87821033	chr12:87821033:C:T	rs11104626	C	T	C	Sox2_MA0143.3	19	0	+	0	0	.
chr12	88039137	88039138	chr12:88039138:A:G	rs56720919	A	G	A	Sox2_MA0143.3	22	0	+	0	0	.
chr12	88167578	88167579	chr12:88167579:G:A	rs7953323	G	A	G	Sox2_MA0143.3	15	0	+	0	0	.
chr12	88227773	88227774	chr12:88227774:A:G	rs10858689	A	G	A	Sox2_MA0143.3	-2	0	-	0	0	.
chr12	88449106	88449107	chr12:88449107:T:C	rs143188656	T	C	T	Sox2_MA0143.3	25	0	-	0	0	.
chr12	88580977	88580978	chr12:88580978:A:T	rs869408	A	T	a	Sox2_MA0143.3	26	0	+	0	0	.
chr12	88763951	88763952	chr12:88763952:C:T	rs11105047	C	T	C	Sox2_MA0143.3	12	0	+	0	0	.
chr12	88897836	88897837	chr12:88897837:T:G	chr12:88897837:T:G	T	G	T	Sox2_MA0143.3	27	0	-	0	0	.
chr12	88971527	88971528	chr12:88971528:A:G	rs10858809	A	G	A	Sox2_MA0143.3	22	0	+	0	0	.
chr12	89064777	89064778	chr12:89064778:G:C	rs74490964	G	C	G	Sox2_MA0143.3	1	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr12	89065185	89065186	chr12:89065186:C:T	rs77743473	C	T	C	Sox2_MA0143.3	1	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr12	89181634	89181635	chr12:89181635:A:C	chr12:89181635:A:C	A	C	A	Sox2_MA0143.3	8	0	+	0	0	.
chr12	89230501	89230502	chr12:89230502:C:T	rs963921	C	T	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr12	89345974	89345975	chr12:89345975:A:G	rs543673918	A	G	A	Sox2_MA0143.3	15	0	-	0	0	.
chr12	89346008	89346009	chr12:89346009:A:G	rs143446148	A	G	A	Sox2_MA0143.3	-19	0	-	0	0	.
chr12	89346517	89346518	chr12:89346518:G:T	rs549789748	G	T	G	Sox2_MA0143.3	7	1	+	8.864090315184848	9.800647049772198	CCTTTGTG
chr12	89349939	89349940	chr12:89349940:G:T	rs560760322	G	T	G	Sox2_MA0143.3	-3	0	-	0	0	.
chr12	89350036	89350037	chr12:89350037:T:C	rs111655193	T	C	T	Sox2_MA0143.3	9	0	+	0	0	.
chr12	89350043	89350044	chr12:89350044:T:C	rs78601602	T	C	T	Sox2_MA0143.3	16	0	+	0	0	.
chr12	89350047	89350048	chr12:89350048:T:A	rs76651047	T	A	T	Sox2_MA0143.3	20	0	+	0	0	.
chr12	89353327	89353328	chr12:89353328:C:A	rs185392462	C	A	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr12	89353348	89353349	chr12:89353349:C:T	chr12:89353349:C:T	C	T	C	Sox2_MA0143.3	17	0	+	0	0	.
chr12	89353674	89353675	chr12:89353675:C:T	rs145732560	C	T	C	Sox2_MA0143.3	23	0	+	0	0	.
chr12	89353675	89353676	chr12:89353676:G:C	rs774321685	G	C	G	Sox2_MA0143.3	24	0	+	0	0	.
chr12	89373029	89373030	chr12:89373030:G:T	rs11105267	G	T	T	Sox2_MA0143.3	-2	0	+	0	0	.
chr12	89390207	89390208	chr12:89390208:C:T	rs797266	C	T	C	Sox2_MA0143.3	11	0	-	0	0	.
chr12	89645624	89645625	chr12:89645625:A:G	rs78239950	A	G	A	Sox2_MA0143.3	22	0	-	0	0	.
chr12	89848588	89848589	chr12:89848589:T:G	rs75994090	T	G	T	Sox2_MA0143.3	-10	0	+	0	0	.
chr12	89943268	89943269	chr12:89943269:A:C	rs4842697	A	C	A	Sox2_MA0143.3	13	0	+	0	0	.
chr12	89950917	89950918	chr12:89950918:A:G	rs7294671	A	G	A	Sox2_MA0143.3	3	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr12	89966285	89966286	chr12:89966286:A:G	rs10745520	A	G	G	Sox2_MA0143.3	22	0	+	0	0	.
chr12	90057273	90057274	chr12:90057274:A:G	rs10858947	A	G	A	Sox2_MA0143.3	-2	0	-	0	0	.
chr12	90133889	90133890	chr12:90133890:A:G	rs542071097	A	G	A	Sox2_MA0143.3	23	0	-	0	0	.
chr12	90150440	90150441	chr12:90150441:G:T	rs7135764	G	T	T	Sox2_MA0143.3	-1	0	-	0	0	.
chr12	90250058	90250059	chr12:90250059:A:G	rs11105550	A	G	A	Sox2_MA0143.3	6	1	-	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr12	90282066	90282067	chr12:90282067:T:G	rs1909552	T	G	G	Sox2_MA0143.3	4	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr12	90282068	90282069	chr12:90282069:T:C	rs7977623	T	C	T	Sox2_MA0143.3	6	1	+	9.613475778572903	2.7047209992576837	CCATTGTT
chr12	90617757	90617758	chr12:90617758:G:A	rs2723931	G	A	A	Sox2_MA0143.3	-9	0	-	0	0	.
chr12	90875712	90875713	chr12:90875713:A:G	rs10745537	A	G	G	Sox2_MA0143.3	14	0	+	0	0	.
chr12	90959738	90959739	chr12:90959739:G:C	rs956491402	G	C	G	Sox2_MA0143.3	26	0	-	0	0	.
chr12	91099057	91099058	chr12:91099058:C:A	rs720529	C	A	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr12	91172222	91172223	chr12:91172223:T:C	chr12:91172223:T:C	T	C	T	Sox2_MA0143.3	26	0	-	0	0	.
chr12	91172258	91172259	chr12:91172259:C:T	rs3138187	C	T	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr12	91240936	91240937	chr12:91240937:T:C	rs76803703	T	C	T	Sox2_MA0143.3	11	0	+	0	0	.
chr12	91261375	91261376	chr12:91261376:G:A	rs826772	G	A	G	Sox2_MA0143.3	19	0	-	0	0	.
chr12	91367447	91367448	chr12:91367448:A:C	rs545983762	A	C	A	Sox2_MA0143.3	-17	0	-	0	0	.
chr12	91370136	91370137	chr12:91370137:A:G	rs11106114	A	G	a	Sox2_MA0143.3	-1	0	-	0	0	.
chr12	91524735	91524736	chr12:91524736:C:G	rs989525	C	G	G	Sox2_MA0143.3	21	0	-	0	0	.
chr12	91609330	91609331	chr12:91609331:G:A	rs2130401	G	A	A	Sox2_MA0143.3	-18	0	+	0	0	.
chr12	91715748	91715749	chr12:91715749:A:G	rs1994885	A	G	G	Sox2_MA0143.3	18	0	-	0	0	.
chr12	91797688	91797689	chr12:91797689:A:G	rs7960822	A	G	G	Sox2_MA0143.3	-12	0	+	0	0	.
chr12	91813651	91813652	chr12:91813652:C:T	rs138623865	C	T	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr12	91871759	91871760	chr12:91871760:A:C	rs4603346	A	C	C	Sox2_MA0143.3	17	0	-	0	0	.
chr12	91903127	91903128	chr12:91903128:G:C	rs4842795	G	C	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr12	91903144	91903145	chr12:91903145:C:T	rs55847141	C	T	C	Sox2_MA0143.3	0	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr12	91914450	91914451	chr12:91914451:T:C	rs4503583	T	C	T	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr12	91952276	91952277	chr12:91952277:G:A	rs12423676	G	A	G	Sox2_MA0143.3	19	0	+	0	0	.
chr12	92030896	92030897	chr12:92030897:C:G	rs903066	C	G	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr12	92032342	92032343	chr12:92032343:A:G	rs73370801	A	G	G	Sox2_MA0143.3	-14	0	+	0	0	.
chr12	92032357	92032358	chr12:92032358:C:G	rs146399220	C	G	C	Sox2_MA0143.3	1	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr12	92105275	92105276	chr12:92105276:T:C	rs2934166	T	C	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr12	92112070	92112071	chr12:92112071:G:A	rs77234948	G	A	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr12	92112071	92112072	chr12:92112072:T:C	rs7953529	T	C	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr12	92115316	92115317	chr12:92115317:G:A	rs709236	G	A	A	Sox2_MA0143.3	0	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr12	92123686	92123687	chr12:92123687:C:T	rs11106432	C	T	C	Sox2_MA0143.3	16	0	-	0	0	.
chr12	92137831	92137832	chr12:92137832:T:G	rs790575	T	G	T	Sox2_MA0143.3	-4	0	-	0	0	.
chr12	92145063	92145064	chr12:92145064:G:A	rs28399535	G	A	G	Sox2_MA0143.3	-11	0	+	0	0	.
chr12	92145958	92145959	chr12:92145959:A:T	rs764462999	A	T	A	Sox2_MA0143.3	13	0	+	0	0	.
chr12	92176248	92176249	chr12:92176249:T:G	rs17020068	T	G	T	Sox2_MA0143.3	24	0	-	0	0	.
chr12	92185215	92185216	chr12:92185216:C:A	rs11106456	C	A	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr12	92294996	92294997	chr12:92294997:C:G	rs184451943	C	G	C	Sox2_MA0143.3	0	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr12	92302504	92302505	chr12:92302505:T:C	rs428413	T	C	T	Sox2_MA0143.3	7	1	-	3.5547341015215945	8.864090315184848	CCTTTGTA
chr12	92303684	92303685	chr12:92303685:G:A	rs56273347	G	A	G	Sox2_MA0143.3	22	0	+	0	0	.
chr12	92406203	92406204	chr12:92406204:T:A	rs447178	T	A	T	Sox2_MA0143.3	20	0	-	0	0	.
chr12	92406233	92406234	chr12:92406234:T:C	rs373660	T	C	T	Sox2_MA0143.3	-10	0	-	0	0	.
chr12	92421892	92421893	chr12:92421893:C:T	rs4760390	C	T	c	Sox2_MA0143.3	-4	0	-	0	0	.
chr12	92430296	92430297	chr12:92430297:T:A	rs12578643	T	A	T	Sox2_MA0143.3	-5	0	+	0	0	.
chr12	92468586	92468587	chr12:92468587:C:A	rs1695068	C	A	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr12	92526180	92526181	chr12:92526181:A:G	rs10492342	A	G	A	Sox2_MA0143.3	-12	0	+	0	0	.
chr12	92547805	92547806	chr12:92547806:G:A	rs1484154	G	A	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr12	92595714	92595715	chr12:92595715:C:T	rs17662568	C	T	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr12	92600403	92600404	chr12:92600404:A:G	rs1961763	A	G	G	Sox2_MA0143.3	6	1	-	9.613475778572903	2.7047209992576837	CCATTGTT
chr12	92621729	92621730	chr12:92621730:G:A	rs10777417	G	A	G	Sox2_MA0143.3	14	0	-	0	0	.
chr12	92690277	92690278	chr12:92690278:G:A	rs3843636	G	A	G	Sox2_MA0143.3	19	0	-	0	0	.
chr12	92717549	92717550	chr12:92717550:T:C	rs74875727	T	C	T	Sox2_MA0143.3	12	0	-	0	0	.
chr12	92894430	92894431	chr12:92894431:T:C	rs7488592	T	C	t	Sox2_MA0143.3	-11	0	+	0	0	.
chr12	92912410	92912411	chr12:92912411:C:T	rs190391910	C	T	T	Sox2_MA0143.3	17	0	-	0	0	.
chr12	92943156	92943157	chr12:92943157:A:G	rs192014583	A	G	A	Sox2_MA0143.3	16	0	+	0	0	.
chr12	92953857	92953858	chr12:92953858:A:G	rs4418851	A	G	A	Sox2_MA0143.3	3	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr12	93008661	93008662	chr12:93008662:T:C	rs144779459	T	C	T	Sox2_MA0143.3	2	1	-	8.676919043985553	2.5582713367092715	CCATTGTG
chr12	93135285	93135286	chr12:93135286:T:G	rs11106869	T	G	T	Sox2_MA0143.3	-4	0	-	0	0	.
chr12	93220271	93220272	chr12:93220272:G:C	rs2060355	G	C	G	Sox2_MA0143.3	22	0	+	0	0	.
chr12	93237981	93237982	chr12:93237982:A:G	rs7303498	A	G	A	Sox2_MA0143.3	4	1	-	9.800647049772198	2.8918922704569785	CCTTTGTT
chr12	93279759	93279760	chr12:93279760:G:C	rs6538404	G	C	G	Sox2_MA0143.3	5	1	+	9.613475778572903	2.7047209992576837	CCATTGTT
chr12	93358616	93358617	chr12:93358617:C:T	rs73223234	C	T	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr12	93453868	93453869	chr12:93453869:C:T	rs79329130	C	T	c	Sox2_MA0143.3	1	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr12	93467696	93467697	chr12:93467697:T:G	rs2290880	T	G	T	Sox2_MA0143.3	13	0	+	0	0	.
chr12	93467740	93467741	chr12:93467741:C:T	rs144799422	C	T	C	Sox2_MA0143.3	1	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr12	93543603	93543604	chr12:93543604:A:G	rs112712191	A	G	A	Sox2_MA0143.3	14	0	-	0	0	.
chr12	93669027	93669028	chr12:93669028:C:T	rs4761738	C	T	C	Sox2_MA0143.3	19	0	-	0	0	.
chr12	93741975	93741976	chr12:93741976:G:T	rs55943016	G	T	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr12	93785490	93785491	chr12:93785491:T:C	rs115077333	T	C	t	Sox2_MA0143.3	2	1	+	3.5547341015215945	-2.751084876953981	CCTTTGTA
chr12	93794780	93794781	chr12:93794781:T:A	rs11107189	T	A	T	Sox2_MA0143.3	9	0	+	0	0	.
chr12	93849141	93849142	chr12:93849142:C:T	rs10859601	C	T	C	Sox2_MA0143.3	0	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr12	93991481	93991482	chr12:93991482:A:G	rs2971590	A	G	G	Sox2_MA0143.3	-11	0	+	0	0	.
chr12	94101207	94101208	chr12:94101208:A:G	rs146554779	A	G	A	Sox2_MA0143.3	-16	0	+	0	0	.
chr12	94101243	94101244	chr12:94101244:C:T	rs73220744	C	T	C	Sox2_MA0143.3	20	0	+	0	0	.
chr12	94102314	94102315	chr12:94102315:T:C	rs1313728111	T	C	T	Sox2_MA0143.3	17	0	-	0	0	.
chr12	94102339	94102340	chr12:94102340:T:C	rs11107404	T	C	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr12	94102347	94102348	chr12:94102348:C:T	rs11107405	C	T	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr12	94151001	94151002	chr12:94151002:C:G	rs116659635	C	G	C	Sox2_MA0143.3	10	0	+	0	0	.
chr12	94153758	94153759	chr12:94153759:G:A	rs10745676	G	A	G	Sox2_MA0143.3	20	0	+	0	0	.
chr12	94171325	94171326	chr12:94171326:T:C	rs55881272	T	C	T	Sox2_MA0143.3	21	0	-	0	0	.
chr12	94188145	94188146	chr12:94188146:A:G	rs12316859	A	G	A	Sox2_MA0143.3	3	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr12	94255168	94255169	chr12:94255169:T:C	rs2291326	T	C	T	Sox2_MA0143.3	24	0	+	0	0	.
chr12	94534300	94534301	chr12:94534301:C:T	rs7301219	C	T	T	Sox2_MA0143.3	5	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr12	94590705	94590706	chr12:94590706:A:G	rs12426569	A	G	A	Sox2_MA0143.3	17	0	+	0	0	.
chr12	94596557	94596558	chr12:94596558:A:T	rs67970379	A	T	A	Sox2_MA0143.3	23	0	+	0	0	.
chr12	94690151	94690152	chr12:94690152:G:A	rs2366630	G	A	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr12	94707153	94707154	chr12:94707154:C:A	rs7967373	C	A	C	Sox2_MA0143.3	26	0	-	0	0	.
chr12	94731030	94731031	chr12:94731031:A:G	rs7304978	A	G	G	Sox2_MA0143.3	24	0	-	0	0	.
chr12	94750073	94750074	chr12:94750074:C:A	rs79507597	C	A	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr12	94761687	94761688	chr12:94761688:A:G	rs79157024	A	G	A	Sox2_MA0143.3	-18	0	-	0	0	.
chr12	94822991	94822992	chr12:94822992:T:C	rs2366802	T	C	C	Sox2_MA0143.3	20	0	-	0	0	.
chr12	94858096	94858097	chr12:94858097:T:C	rs10777639	T	C	T	Sox2_MA0143.3	-13	0	-	0	0	.
chr12	94942560	94942561	chr12:94942561:A:G	rs11831109	A	G	G	Sox2_MA0143.3	17	0	+	0	0	.
chr12	94948785	94948786	chr12:94948786:G:C	rs75358012	G	C	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr12	95052511	95052512	chr12:95052512:A:G	rs933899	A	G	A	Sox2_MA0143.3	24	0	+	0	0	.
chr12	95212776	95212777	chr12:95212777:C:G	rs75963908	C	G	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr12	95217300	95217301	chr12:95217301:C:T	rs529184977	C	T	C	Sox2_MA0143.3	1	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr12	95217373	95217374	chr12:95217374:C:A	rs79350049	C	A	C	Sox2_MA0143.3	21	0	-	0	0	.
chr12	95217408	95217409	chr12:95217409:T:C	rs6538618	T	C	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr12	95230563	95230564	chr12:95230564:G:A	rs11107943	G	A	G	Sox2_MA0143.3	12	0	+	0	0	.
chr12	95334791	95334792	chr12:95334792:G:A	rs2658680	G	A	A	Sox2_MA0143.3	-16	0	+	0	0	.
chr12	95410915	95410916	chr12:95410916:A:G	rs12814561	A	G	A	Sox2_MA0143.3	-18	0	+	0	0	.
chr12	95484775	95484776	chr12:95484776:T:A	rs7978914	T	A	T	Sox2_MA0143.3	-6	0	+	0	0	.
chr12	95523179	95523180	chr12:95523180:T:C	rs301001	T	C	C	Sox2_MA0143.3	15	0	-	0	0	.
chr12	95523190	95523191	chr12:95523191:A:G	rs301000	A	G	A	Sox2_MA0143.3	4	1	-	8.864090315184848	1.9553355358696274	CCTTTGTG
chr12	95622998	95622999	chr12:95622999:T:A	rs66507304	T	A	t	Sox2_MA0143.3	27	0	+	0	0	.
chr12	95623053	95623054	chr12:95623054:A:G	rs73369436	A	G	a	Sox2_MA0143.3	-7	0	-	0	0	.
chr12	95634096	95634097	chr12:95634097:T:C	rs10859915	T	C	T	Sox2_MA0143.3	-20	0	-	0	0	.
chr12	95767806	95767807	chr12:95767807:T:C	rs11108246	T	C	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr12	95788691	95788692	chr12:95788692:G:A	rs12307075	G	A	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr12	95791533	95791534	chr12:95791534:G:A	rs7139030	G	A	G	Sox2_MA0143.3	22	0	-	0	0	.
chr12	95805901	95805902	chr12:95805902:A:G	rs11108276	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr12	95805917	95805918	chr12:95805918:C:T	rs114516515	C	T	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr12	95943863	95943864	chr12:95943864:G:A	rs7956351	G	A	G	Sox2_MA0143.3	14	0	+	0	0	.
chr12	95988475	95988476	chr12:95988476:G:T	rs11108366	G	T	G	Sox2_MA0143.3	5	1	+	9.019595766176417	2.110840986861197	CCATTGTC
chr12	96052437	96052438	chr12:96052438:C:A	rs12579486	C	A	C	Sox2_MA0143.3	5	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr12	96071035	96071036	chr12:96071036:T:C	rs560537636	T	C	T	Sox2_MA0143.3	6	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr12	96214903	96214904	chr12:96214904:T:A	rs184217584	T	A	T	Sox2_MA0143.3	22	0	+	0	0	.
chr12	96222272	96222273	chr12:96222273:T:C	rs1030137	T	C	t	Sox2_MA0143.3	21	0	-	0	0	.
chr12	96236546	96236547	chr12:96236547:C:T	rs142684266	C	T	C	Sox2_MA0143.3	15	0	+	0	0	.
chr12	96343715	96343716	chr12:96343716:A:G	rs12319114	A	G	A	Sox2_MA0143.3	-10	0	-	0	0	.
chr12	96399581	96399582	chr12:96399582:A:C	rs996797900	A	C	A	Sox2_MA0143.3	-16	0	+	0	0	.
chr12	96399611	96399612	chr12:96399612:G:A	rs7136208	G	A	G	Sox2_MA0143.3	14	0	+	0	0	.
chr12	96427440	96427441	chr12:96427441:C:T	rs145971628	C	T	C	Sox2_MA0143.3	9	0	-	0	0	.
chr12	96437147	96437148	chr12:96437148:A:G	rs78062193	A	G	A	Sox2_MA0143.3	-20	0	+	0	0	.
chr12	96452580	96452581	chr12:96452581:T:C	rs11108514	T	C	C	Sox2_MA0143.3	14	0	-	0	0	.
chr12	96510279	96510280	chr12:96510280:G:A	rs11108558	G	A	G	Sox2_MA0143.3	0	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr12	96517222	96517223	chr12:96517223:A:G	rs11108563	A	G	A	Sox2_MA0143.3	23	0	+	0	0	.
chr12	96670015	96670016	chr12:96670016:C:G	rs1421408	C	G	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr12	96811559	96811560	chr12:96811560:T:C	rs6538743	T	C	T	Sox2_MA0143.3	4	1	+	3.5547341015215945	-3.3540206777936254	CCTTTGTA
chr12	96981096	96981097	chr12:96981097:G:C	rs7975768	G	C	G	Sox2_MA0143.3	0	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr12	97075905	97075906	chr12:97075906:A:C	rs7979480	A	C	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr12	97075913	97075914	chr12:97075914:A:T	rs7979483	A	T	A	Sox2_MA0143.3	-2	0	+	0	0	.
chr12	97119621	97119622	chr12:97119622:A:G	rs17751083	A	G	A	Sox2_MA0143.3	18	0	-	0	0	.
chr12	97288800	97288801	chr12:97288801:G:C	rs118044927	G	C	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr12	97378766	97378767	chr12:97378767:C:T	rs73238061	C	T	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr12	97512277	97512278	chr12:97512278:C:T	rs763414568	C	T	C	Sox2_MA0143.3	14	0	+	0	0	.
chr12	97642962	97642963	chr12:97642963:C:T	rs117317827	C	T	C	Sox2_MA0143.3	23	0	-	0	0	.
chr12	98059048	98059049	chr12:98059049:C:A	rs117391417	C	A	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr12	98183129	98183130	chr12:98183130:T:C	rs10507100	T	C	T	Sox2_MA0143.3	25	0	-	0	0	.
chr12	98345580	98345581	chr12:98345581:A:G	rs11109446	A	G	G	Sox2_MA0143.3	6	1	-	8.676919043985553	1.7681642646703326	CCATTGTG
chr12	98397100	98397101	chr12:98397101:C:A	rs6538869	C	A	A	Sox2_MA0143.3	-5	0	-	0	0	.
chr12	98399524	98399525	chr12:98399525:A:G	rs7136644	A	G	G	Sox2_MA0143.3	26	0	-	0	0	.
chr12	98466063	98466064	chr12:98466064:C:T	rs829896	C	T	C	Sox2_MA0143.3	0	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr12	98491282	98491283	chr12:98491283:G:C	rs76827986	G	C	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr12	98750468	98750469	chr12:98750469:G:A	rs7311164	G	A	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr12	98808451	98808452	chr12:98808452:A:G	rs762746380	A	G	A	Sox2_MA0143.3	4	1	-	9.800647049772198	2.8918922704569785	CCTTTGTT
chr12	98938820	98938821	chr12:98938821:T:C	rs12313609	T	C	T	Sox2_MA0143.3	-18	0	-	0	0	.
chr12	99064503	99064504	chr12:99064504:G:A	rs7957290	G	A	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr12	99389059	99389060	chr12:99389060:C:A	rs4341626	C	A	A	Sox2_MA0143.3	-2	0	-	0	0	.
chr12	99454204	99454205	chr12:99454205:A:C	rs10860442	A	C	A	Sox2_MA0143.3	-11	0	+	0	0	.
chr12	99506612	99506613	chr12:99506613:T:C	rs75501573	T	C	T	Sox2_MA0143.3	26	0	-	0	0	.
chr12	99514789	99514790	chr12:99514790:T:G	rs17471508	T	G	T	Sox2_MA0143.3	10	0	+	0	0	.
chr12	99648261	99648262	chr12:99648262:C:G	rs11109968	C	G	C	Sox2_MA0143.3	16	0	-	0	0	.
chr12	99648384	99648385	chr12:99648385:A:G	rs11109969	A	G	G	Sox2_MA0143.3	3	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr12	100020565	100020566	chr12:100020566:G:T	rs116517438	G	T	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr12	100268848	100268849	chr12:100268849:A:T	rs10860570	A	T	A	Sox2_MA0143.3	17	0	+	0	0	.
chr12	100268858	100268859	chr12:100268859:A:G	rs11110324	A	G	A	Sox2_MA0143.3	27	0	+	0	0	.
chr12	100554885	100554886	chr12:100554886:A:C	rs1371012996	A	C	A	Sox2_MA0143.3	24	0	+	0	0	.
chr12	100715585	100715586	chr12:100715586:A:G	rs11110487	A	G	A	Sox2_MA0143.3	6	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr12	100833669	100833670	chr12:100833670:C:A	rs11110545	C	A	C	Sox2_MA0143.3	7	1	+	9.206767037375712	3.5547341015215945	CCTTTGTC
chr12	100833675	100833676	chr12:100833676:A:T	rs11611770	A	T	A	Sox2_MA0143.3	13	0	+	0	0	.
chr12	100928374	100928375	chr12:100928375:T:C	rs75684058	T	C	T	Sox2_MA0143.3	-12	0	+	0	0	.
chr12	101210304	101210305	chr12:101210305:G:T	chr12:101210305:G:T	G	T	G	Sox2_MA0143.3	0	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr12	101279846	101279847	chr12:101279847:C:T	rs73376737	C	T	C	Sox2_MA0143.3	25	0	+	0	0	.
chr12	101538776	101538777	chr12:101538777:C:A	rs143528340	C	A	C	Sox2_MA0143.3	-20	0	-	0	0	.
chr12	101616415	101616416	chr12:101616416:C:A	rs78548778	C	A	C	Sox2_MA0143.3	24	0	+	0	0	.
chr12	101629105	101629106	chr12:101629106:T:C	rs2293465	T	C	T	Sox2_MA0143.3	3	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr12	101699695	101699696	chr12:101699696:T:C	rs11110968	T	C	T	Sox2_MA0143.3	-19	0	+	0	0	.
chr12	101857694	101857695	chr12:101857695:C:T	rs10860798	C	T	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr12	101867035	101867036	chr12:101867036:G:A	rs10778153	G	A	G	Sox2_MA0143.3	20	0	-	0	0	.
chr12	101941351	101941352	chr12:101941352:A:G	rs4764852	A	G	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr12	101993878	101993879	chr12:101993879:T:C	rs191543685	T	C	T	Sox2_MA0143.3	20	0	+	0	0	.
chr12	102119374	102119375	chr12:102119375:A:G	rs116539016	A	G	A	Sox2_MA0143.3	12	0	+	0	0	.
chr12	102151784	102151785	chr12:102151785:A:G	rs55772007	A	G	G	Sox2_MA0143.3	27	0	-	0	0	.
chr12	102406295	102406296	chr12:102406296:G:A	rs5742691	G	A	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr12	102510740	102510741	chr12:102510741:A:G	rs855221	A	G	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr12	102535646	102535647	chr12:102535647:G:A	rs2245763	G	A	g	Sox2_MA0143.3	-9	0	-	0	0	.
chr12	102666460	102666461	chr12:102666461:C:T	rs12228583	C	T	c	Sox2_MA0143.3	7	1	+	9.206767037375712	9.800647049772198	CCTTTGTC
chr12	102756762	102756763	chr12:102756763:G:A	rs77828545	G	A	G	Sox2_MA0143.3	25	0	-	0	0	.
chr12	102769772	102769773	chr12:102769773:G:T	rs76591298	G	T	G	Sox2_MA0143.3	-3	0	-	0	0	.
chr12	102769779	102769780	chr12:102769780:G:A	rs538750169	G	A	G	Sox2_MA0143.3	26	0	-	0	0	.
chr12	103401646	103401647	chr12:103401647:C:T	rs117838745	C	T	C	Sox2_MA0143.3	9	0	-	0	0	.
chr12	103401652	103401653	chr12:103401653:A:T	rs200782771	A	T	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr12	103710448	103710449	chr12:103710449:C:T	rs11111722	C	T	C	Sox2_MA0143.3	24	0	+	0	0	.
chr12	103772750	103772751	chr12:103772751:C:A	rs3087891	C	A	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr12	103796144	103796145	chr12:103796145:A:C	rs10861104	A	C	A	Sox2_MA0143.3	13	0	+	0	0	.
chr12	103839987	103839988	chr12:103839988:C:T	rs7968124	C	T	C	Sox2_MA0143.3	26	0	-	0	0	.
chr12	103966152	103966153	chr12:103966153:T:A	rs4135039	T	A	T	Sox2_MA0143.3	19	0	-	0	0	.
chr12	103966153	103966154	chr12:103966154:C:G	rs322102	C	G	C	Sox2_MA0143.3	18	0	-	0	0	.
chr12	104140424	104140425	chr12:104140425:C:T	rs77833398	C	T	C	Sox2_MA0143.3	5	1	-	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr12	104216491	104216492	chr12:104216492:T:A	rs150618269	T	A	T	Sox2_MA0143.3	-8	0	+	0	0	.
chr12	104264281	104264282	chr12:104264282:G:A	rs10778311	G	A	G	Sox2_MA0143.3	1	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr12	104288749	104288750	chr12:104288750:C:G	rs35009941	C	G	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr12	104288788	104288789	chr12:104288789:G:C	rs764185102	G	C	G	Sox2_MA0143.3	21	0	+	0	0	.
chr12	104459813	104459814	chr12:104459814:A:G	rs3751321	A	G	G	Sox2_MA0143.3	16	0	+	0	0	.
chr12	104467715	104467716	chr12:104467716:G:T	rs4964797	G	T	T	Sox2_MA0143.3	-15	0	-	0	0	.
chr12	104544948	104544949	chr12:104544949:T:C	rs1795867	T	C	t	Sox2_MA0143.3	27	0	+	0	0	.
chr12	104563351	104563352	chr12:104563352:G:A	rs7133778	G	A	A	Sox2_MA0143.3	16	0	+	0	0	.
chr12	104597117	104597118	chr12:104597118:G:C	rs994574711	G	C	G	Sox2_MA0143.3	26	0	+	0	0	.
chr12	104624272	104624273	chr12:104624273:G:A	rs11112137	G	A	G	Sox2_MA0143.3	14	0	-	0	0	.
chr12	104657445	104657446	chr12:104657446:G:A	rs768600115	G	A	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr12	104741415	104741416	chr12:104741416:T:C	rs10861275	T	C	T	Sox2_MA0143.3	20	0	-	0	0	.
chr12	104960217	104960218	chr12:104960218:A:T	rs74535175	A	T	A	Sox2_MA0143.3	14	0	-	0	0	.
chr12	105037429	105037430	chr12:105037430:G:A	rs4964314	G	A	G	Sox2_MA0143.3	19	0	+	0	0	.
chr12	105053701	105053702	chr12:105053702:T:A	rs4144467	T	A	A	Sox2_MA0143.3	18	0	+	0	0	.
chr12	105084172	105084173	chr12:105084173:C:T	rs11112362	C	T	T	Sox2_MA0143.3	-2	0	-	0	0	.
chr12	105221097	105221098	chr12:105221098:T:C	rs114600215	T	C	T	Sox2_MA0143.3	20	0	-	0	0	.
chr12	105233305	105233306	chr12:105233306:A:G	rs1196781	A	G	G	Sox2_MA0143.3	6	1	-	9.613475778572903	2.7047209992576837	CCATTGTT
chr12	105273006	105273007	chr12:105273007:T:C	rs56043130	T	C	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr12	105274881	105274882	chr12:105274882:G:A	rs12580027	G	A	G	Sox2_MA0143.3	22	0	-	0	0	.
chr12	105382861	105382862	chr12:105382862:A:C	rs1291280550	A	C	A	Sox2_MA0143.3	11	0	+	0	0	.
chr12	105492577	105492578	chr12:105492578:G:A	rs1526851	G	A	G	Sox2_MA0143.3	25	0	-	0	0	.
chr12	105492616	105492617	chr12:105492617:G:A	rs114911136	G	A	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr12	105532603	105532604	chr12:105532604:G:A	rs77998180	G	A	G	Sox2_MA0143.3	-3	0	+	0	0	.
chr12	105622318	105622319	chr12:105622319:T:C	rs17037359	T	C	T	Sox2_MA0143.3	14	0	-	0	0	.
chr12	105680125	105680126	chr12:105680126:A:G	rs4284495	A	G	A	Sox2_MA0143.3	15	0	+	0	0	.
chr12	105706099	105706100	chr12:105706100:A:G	rs17037459	A	G	A	Sox2_MA0143.3	21	0	-	0	0	.
chr12	105840715	105840716	chr12:105840716:A:G	rs4964421	A	G	A	Sox2_MA0143.3	15	0	-	0	0	.
chr12	105939780	105939781	chr12:105939781:A:C	rs7967359	A	C	C	Sox2_MA0143.3	26	0	-	0	0	.
chr12	106015916	106015917	chr12:106015917:C:T	rs2468218	C	T	.	Sox2_MA0143.3	-11	0	+	0	0	.
chr12	106052209	106052210	chr12:106052210:G:A	rs2374584	G	A	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr12	106205945	106205946	chr12:106205946:G:A	rs2649717	G	A	A	Sox2_MA0143.3	-14	0	+	0	0	.
chr12	106255445	106255446	chr12:106255446:C:T	rs61942136	C	T	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr12	106271796	106271797	chr12:106271797:G:A	rs60199608	G	A	G	Sox2_MA0143.3	-14	0	+	0	0	.
chr12	106287010	106287011	chr12:106287011:T:C	rs73197506	T	C	C	Sox2_MA0143.3	-5	0	-	0	0	.
chr12	106585969	106585970	chr12:106585970:T:C	rs4964471	T	C	C	Sox2_MA0143.3	16	0	+	0	0	.
chr12	106633763	106633764	chr12:106633764:T:C	rs180717204	T	C	t	Sox2_MA0143.3	10	0	-	0	0	.
chr12	106865691	106865692	chr12:106865692:T:C	rs7977247	T	C	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr12	106867635	106867636	chr12:106867636:A:G	rs809285	A	G	G	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr12	106947885	106947886	chr12:106947886:T:G	rs10778517	T	G	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr12	106955307	106955308	chr12:106955308:G:T	rs146456815	G	T	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr12	107278088	107278089	chr12:107278089:A:G	rs11113250	A	G	G	Sox2_MA0143.3	23	0	-	0	0	.
chr12	107278119	107278120	chr12:107278120:A:G	rs17578815	A	G	A	Sox2_MA0143.3	-8	0	-	0	0	.
chr12	107329939	107329940	chr12:107329940:G:A	rs10861724	G	A	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr12	107378078	107378079	chr12:107378079:A:T	rs10861731	A	T	A	Sox2_MA0143.3	-15	0	+	0	0	.
chr12	107392514	107392515	chr12:107392515:C:A	rs80090472	C	A	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr12	107561142	107561143	chr12:107561143:C:T	rs7485036	C	T	T	Sox2_MA0143.3	1	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr12	107610043	107610044	chr12:107610044:C:T	rs760415369	C	T	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr12	107651514	107651515	chr12:107651515:T:C	rs2241186	T	C	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr12	107774928	107774929	chr12:107774929:G:A	rs61938581	G	A	G	Sox2_MA0143.3	22	0	+	0	0	.
chr12	107782355	107782356	chr12:107782356:G:A	rs11113475	G	A	G	Sox2_MA0143.3	1	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr12	107801064	107801065	chr12:107801065:T:C	rs61938589	T	C	C	Sox2_MA0143.3	10	0	-	0	0	.
chr12	107820958	107820959	chr12:107820959:T:G	rs11113515	T	G	T	Sox2_MA0143.3	-12	0	-	0	0	.
chr12	107827554	107827555	chr12:107827555:C:T	rs7965932	C	T	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr12	107885149	107885150	chr12:107885150:T:A	rs11113566	T	A	T	Sox2_MA0143.3	-1	0	+	0	0	.
chr12	107956412	107956413	chr12:107956413:G:A	rs4301829	G	A	G	Sox2_MA0143.3	27	0	-	0	0	.
chr12	108055253	108055254	chr12:108055254:G:C	rs7134131	G	C	G	Sox2_MA0143.3	23	0	-	0	0	.
chr12	108065707	108065708	chr12:108065708:T:C	rs73195594	T	C	T	Sox2_MA0143.3	9	0	-	0	0	.
chr12	108208633	108208634	chr12:108208634:A:T	rs1426356	A	T	G	Sox2_MA0143.3	17	0	-	0	0	.
chr12	108250411	108250412	chr12:108250412:T:C	rs9739493	T	C	C	Sox2_MA0143.3	19	0	+	0	0	.
chr12	108254607	108254608	chr12:108254608:C:A	rs11113787	C	A	A	Sox2_MA0143.3	18	0	-	0	0	.
chr12	108257385	108257386	chr12:108257386:A:T	rs12422804	A	T	T	Sox2_MA0143.3	-17	0	-	0	0	.
chr12	108268647	108268648	chr12:108268648:T:G	rs1365307	T	G	G	Sox2_MA0143.3	4	1	+	9.206767037375712	2.2980122580604916	CCTTTGTC
chr12	108332059	108332060	chr12:108332060:A:G	rs11113824	A	G	A	Sox2_MA0143.3	15	0	-	0	0	.
chr12	108357351	108357352	chr12:108357352:C:G	rs10507229	C	G	C	Sox2_MA0143.3	17	0	-	0	0	.
chr12	108361564	108361565	chr12:108361565:T:C	rs803560	T	C	T	Sox2_MA0143.3	20	0	-	0	0	.
chr12	108362659	108362660	chr12:108362660:T:C	rs6539426	T	C	T	Sox2_MA0143.3	3	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr12	108409751	108409752	chr12:108409752:T:C	rs2673745	T	C	T	Sox2_MA0143.3	22	0	-	0	0	.
chr12	108519760	108519761	chr12:108519761:A:G	rs34263583	A	G	G	Sox2_MA0143.3	17	0	-	0	0	.
chr12	108563163	108563164	chr12:108563164:C:T	rs181567741	C	T	C	Sox2_MA0143.3	10	0	-	0	0	.
chr12	108589689	108589690	chr12:108589690:G:A	rs7298618	G	A	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr12	108622632	108622633	chr12:108622633:G:A	rs1005333468	G	A	G	Sox2_MA0143.3	18	0	-	0	0	.
chr12	108642824	108642825	chr12:108642825:A:G	rs12581716	A	G	A	Sox2_MA0143.3	22	0	+	0	0	.
chr12	108643983	108643984	chr12:108643984:C:T	rs117852159	C	T	C	Sox2_MA0143.3	19	0	-	0	0	.
chr12	108644012	108644013	chr12:108644013:G:A	rs10861955	G	A	A	Sox2_MA0143.3	-10	0	-	0	0	.
chr12	108667754	108667755	chr12:108667755:T:G	rs1079088	T	G	T	Sox2_MA0143.3	-11	0	+	0	0	.
chr12	108691826	108691827	chr12:108691827:C:G	chr12:108691827:C:G	C	G	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr12	108691944	108691945	chr12:108691945:C:A	chr12:108691945:C:A	C	A	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr12	108723601	108723602	chr12:108723602:C:A	rs12582815	C	A	A	Sox2_MA0143.3	20	0	-	0	0	.
chr12	108723637	108723638	chr12:108723638:T:C	rs996777750	T	C	T	Sox2_MA0143.3	-16	0	-	0	0	.
chr12	108741203	108741204	chr12:108741204:A:G	rs7959539	A	G	G	Sox2_MA0143.3	6	1	-	8.676919043985553	1.7681642646703326	CCATTGTG
chr12	108807337	108807338	chr12:108807338:A:G	rs143277327	A	G	A	Sox2_MA0143.3	3	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr12	108923258	108923259	chr12:108923259:A:C	rs12580021	A	C	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr12	108968054	108968055	chr12:108968055:T:C	rs149383872	T	C	t	Sox2_MA0143.3	10	0	+	0	0	.
chr12	109098753	109098754	chr12:109098754:A:C	rs3219211	A	C	A	Sox2_MA0143.3	20	0	-	0	0	.
chr12	109115974	109115975	chr12:109115975:C:T	rs73195473	C	T	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr12	109115999	109116000	chr12:109116000:T:A	rs760787052	T	A	T	Sox2_MA0143.3	22	0	+	0	0	.
chr12	109289834	109289835	chr12:109289835:T:C	rs4766588	T	C	T	Sox2_MA0143.3	-19	0	-	0	0	.
chr12	109293978	109293979	chr12:109293979:A:G	rs12422904	A	G	A	Sox2_MA0143.3	-5	0	+	0	0	.
chr12	109411261	109411262	chr12:109411262:C:A	rs188793330	C	A	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr12	109626568	109626569	chr12:109626569:C:G	rs563950028	C	G	C	Sox2_MA0143.3	26	0	-	0	0	.
chr12	109720815	109720816	chr12:109720816:T:C	rs11831476	T	C	C	Sox2_MA0143.3	10	0	-	0	0	.
chr12	109732494	109732495	chr12:109732495:C:T	rs11612440	C	T	C	Sox2_MA0143.3	23	0	+	0	0	.
chr12	109838273	109838274	chr12:109838274:A:T	rs7139451	A	T	T	Sox2_MA0143.3	2	1	-	8.864090315184848	8.676919043985553	CCTTTGTG
chr12	109845454	109845455	chr12:109845455:T:C	rs113848314	T	C	T	Sox2_MA0143.3	12	0	-	0	0	.
chr12	109926127	109926128	chr12:109926128:G:A	rs187784403	G	A	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr12	110039820	110039821	chr12:110039821:C:T	rs11608607	C	T	C	Sox2_MA0143.3	21	0	-	0	0	.
chr12	110079786	110079787	chr12:110079787:C:T	rs1424328690	C	T	C	Sox2_MA0143.3	1	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr12	110079796	110079797	chr12:110079797:C:G	rs11064958	C	G	C	Sox2_MA0143.3	14	0	-	0	0	.
chr12	110100327	110100328	chr12:110100328:C:T	rs575415748	C	T	C	Sox2_MA0143.3	13	0	+	0	0	.
chr12	110245638	110245639	chr12:110245639:T:C	rs140898366	T	C	T	Sox2_MA0143.3	8	0	+	0	0	.
chr12	110301609	110301610	chr12:110301610:G:T	rs140592518	G	T	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr12	110314368	110314369	chr12:110314369:G:A	rs116048960	G	A	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr12	110367276	110367277	chr12:110367277:G:C	rs145798258	G	C	G	Sox2_MA0143.3	1	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr12	110643878	110643879	chr12:110643879:C:T	rs924754507	C	T	C	Sox2_MA0143.3	10	0	+	0	0	.
chr12	110700134	110700135	chr12:110700135:G:A	rs73194023	G	A	G	Sox2_MA0143.3	1	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr12	110816903	110816904	chr12:110816904:T:C	rs117378411	T	C	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr12	110849921	110849922	chr12:110849922:T:C	rs2283348	T	C	T	Sox2_MA0143.3	-19	0	-	0	0	.
chr12	110972004	110972005	chr12:110972005:G:A	rs145208636	G	A	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr12	110988595	110988596	chr12:110988596:A:G	rs186194989	A	G	A	Sox2_MA0143.3	24	0	-	0	0	.
chr12	111036515	111036516	chr12:111036516:A:G	rs76518476	A	G	A	Sox2_MA0143.3	25	0	+	0	0	.
chr12	111056669	111056670	chr12:111056670:G:A	rs77374753	G	A	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr12	111173948	111173949	chr12:111173949:G:T	rs11837864	G	T	G	Sox2_MA0143.3	8	0	-	0	0	.
chr12	111221269	111221270	chr12:111221270:T:C	rs4766556	T	C	C	Sox2_MA0143.3	4	1	+	8.676919043985553	1.7681642646703322	CCATTGTG
chr12	111221291	111221292	chr12:111221292:T:C	rs10774615	T	C	C	Sox2_MA0143.3	26	0	+	0	0	.
chr12	111340838	111340839	chr12:111340839:T:C	rs112955501	T	C	T	Sox2_MA0143.3	-2	0	+	0	0	.
chr12	111413460	111413461	chr12:111413461:T:A	rs12297345	T	A	T	Sox2_MA0143.3	12	0	+	0	0	.
chr12	111443526	111443527	chr12:111443527:G:T	rs28615162	G	T	T	Sox2_MA0143.3	-2	0	+	0	0	.
chr12	111722515	111722516	chr12:111722516:A:G	rs1299543323	A	G	-	Sox2_MA0143.3	-15	0	-	0	0	.
chr12	111792414	111792415	chr12:111792415:C:T	rs76977743	C	T	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr12	111868360	111868361	chr12:111868361:G:T	rs11066054	G	T	G	Sox2_MA0143.3	13	0	-	0	0	.
chr12	111938185	111938186	chr12:111938186:A:C	rs3752630	A	C	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr12	112154016	112154017	chr12:112154017:T:C	rs60549974	T	C	T	Sox2_MA0143.3	22	0	+	0	0	.
chr12	112170608	112170609	chr12:112170609:G:A	rs144887240	G	A	A	Sox2_MA0143.3	-13	0	+	0	0	.
chr12	112182841	112182842	chr12:112182842:T:A	rs186261481	T	A	T	Sox2_MA0143.3	12	0	-	0	0	.
chr12	112587856	112587857	chr12:112587857:G:A	rs11614063	G	A	G	Sox2_MA0143.3	0	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr12	112741172	112741173	chr12:112741173:A:C	rs767103	A	C	C	Sox2_MA0143.3	4	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr12	112774565	112774566	chr12:112774566:G:C	rs2107109	G	C	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr12	112906822	112906823	chr12:112906823:G:A	rs111889842	G	A	G	Sox2_MA0143.3	15	0	-	0	0	.
chr12	112906838	112906839	chr12:112906839:G:A	rs570110762	G	A	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr12	112930443	112930444	chr12:112930444:C:A	rs7298184	C	A	A	Sox2_MA0143.3	14	0	+	0	0	.
chr12	112991523	112991524	chr12:112991524:G:A	rs7975318	G	A	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr12	113000028	113000029	chr12:113000029:G:C	rs7958523	G	C	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr12	113041860	113041861	chr12:113041861:T:C	rs10850123	T	C	t	Sox2_MA0143.3	-5	0	-	0	0	.
chr12	113206405	113206406	chr12:113206406:T:C	rs61943562	T	C	C	Sox2_MA0143.3	8	0	+	0	0	.
chr12	113241918	113241919	chr12:113241919:A:G	rs1252573491	A	G	A	Sox2_MA0143.3	-5	0	+	0	0	.
chr12	113286708	113286709	chr12:113286709:C:T	rs61072681	C	T	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr12	113299057	113299058	chr12:113299058:G:T	rs61932102	G	T	T	Sox2_MA0143.3	-14	0	-	0	0	.
chr12	113397054	113397055	chr12:113397055:A:G	rs73194894	A	G	A	Sox2_MA0143.3	2	1	+	9.019595766176417	2.900948058900136	CCATTGTC
chr12	113422356	113422357	chr12:113422357:A:G	rs7295347	A	G	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr12	113537335	113537336	chr12:113537336:T:A	rs933876	T	A	A	Sox2_MA0143.3	18	0	+	0	0	.
chr12	113767053	113767054	chr12:113767054:T:G	rs12227022	T	G	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr12	113831180	113831181	chr12:113831181:C:T	rs116590798	C	T	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr12	113857769	113857770	chr12:113857770:A:G	rs1569072	A	G	G	Sox2_MA0143.3	-3	0	-	0	0	.
chr12	113862635	113862636	chr12:113862636:G:C	rs10850228	G	C	C	Sox2_MA0143.3	26	0	+	0	0	.
chr12	113990671	113990672	chr12:113990672:C:T	rs7137785	C	T	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr12	114125698	114125699	chr12:114125699:G:A	rs61930838	G	A	G	Sox2_MA0143.3	24	0	-	0	0	.
chr12	114251973	114251974	chr12:114251974:T:C	rs10850297	T	C	C	Sox2_MA0143.3	4	1	+	8.676919043985553	1.7681642646703322	CCATTGTG
chr12	114368729	114368730	chr12:114368730:T:C	rs1895584	T	C	T	Sox2_MA0143.3	-19	0	+	0	0	.
chr12	114410036	114410037	chr12:114410037:C:A	rs61931003	C	A	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr12	114420014	114420015	chr12:114420015:G:A	rs2686565	G	A	G	Sox2_MA0143.3	14	0	+	0	0	.
chr12	114420018	114420019	chr12:114420019:T:C	rs4536277	T	C	T	Sox2_MA0143.3	18	0	+	0	0	.
chr12	114530803	114530804	chr12:114530804:C:T	rs11610783	C	T	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr12	114628571	114628572	chr12:114628572:A:G	rs144695154	A	G	A	Sox2_MA0143.3	-8	0	+	0	0	.
chr12	114641986	114641987	chr12:114641987:G:T	rs7298119	G	T	G	Sox2_MA0143.3	14	0	+	0	0	.
chr12	114656454	114656455	chr12:114656455:A:G	rs11067228	A	G	A	Sox2_MA0143.3	2	1	+	9.613475778572903	3.494828071296623	CCATTGTT
chr12	114698432	114698433	chr12:114698433:C:T	rs118157504	C	T	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr12	114742521	114742522	chr12:114742522:C:T	rs7301447	C	T	C	Sox2_MA0143.3	19	0	-	0	0	.
chr12	115011799	115011800	chr12:115011800:G:A	rs7957465	G	A	A	Sox2_MA0143.3	25	0	+	0	0	.
chr12	115062885	115062886	chr12:115062886:T:A	rs35506	T	A	A	Sox2_MA0143.3	6	1	+	9.613475778572903	2.7047209992576837	CCATTGTT
chr12	115104516	115104517	chr12:115104517:C:T	rs77042120	C	T	C	Sox2_MA0143.3	1	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr12	115139186	115139187	chr12:115139187:C:T	rs12426749	C	T	C	Sox2_MA0143.3	12	0	-	0	0	.
chr12	115205297	115205298	chr12:115205298:T:A	rs7301922	T	A	T	Sox2_MA0143.3	20	0	+	0	0	.
chr12	115236689	115236690	chr12:115236690:T:C	rs2052736	T	C	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr12	115349774	115349775	chr12:115349775:C:T	rs10850487	C	T	T	Sox2_MA0143.3	0	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr12	115354778	115354779	chr12:115354779:C:T	rs7956939	C	T	C	Sox2_MA0143.3	20	0	-	0	0	.
chr12	115508150	115508151	chr12:115508151:G:C	rs117851726	G	C	G	Sox2_MA0143.3	17	0	+	0	0	.
chr12	115512102	115512103	chr12:115512103:C:G	rs1995170	C	G	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr12	115554948	115554949	chr12:115554949:T:G	rs1976344	T	G	G	Sox2_MA0143.3	6	1	+	9.613475778572903	2.7047209992576837	CCATTGTT
chr12	115606113	115606114	chr12:115606114:T:G	rs7972925	T	G	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr12	115671226	115671227	chr12:115671227:G:A	rs7309807	G	A	A	Sox2_MA0143.3	-13	0	+	0	0	.
chr12	115691322	115691323	chr12:115691323:G:T	chr12:115691323:G:T	G	T	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr12	115800031	115800032	chr12:115800032:A:G	rs796668	A	G	G	Sox2_MA0143.3	12	0	-	0	0	.
chr12	115813430	115813431	chr12:115813431:C:T	rs697863	C	T	T	Sox2_MA0143.3	20	0	+	0	0	.
chr12	115822998	115822999	chr12:115822999:A:G	rs80338611	A	G	A	Sox2_MA0143.3	27	0	-	0	0	.
chr12	115834461	115834462	chr12:115834462:G:A	rs16946348	G	A	G	Sox2_MA0143.3	19	0	-	0	0	.
chr12	115909654	115909655	chr12:115909655:G:A	rs7299716	G	A	a	Sox2_MA0143.3	23	0	+	0	0	.
chr12	115946041	115946042	chr12:115946042:T:C	rs12230824	T	C	T	Sox2_MA0143.3	-13	0	+	0	0	.
chr12	116054078	116054079	chr12:116054079:T:C	chr12:116054079:T:C	T	C	T	Sox2_MA0143.3	3	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr12	116123874	116123875	chr12:116123875:C:T	rs147399484	C	T	c	Sox2_MA0143.3	17	0	-	0	0	.
chr12	116480598	116480599	chr12:116480599:T:C	rs12830663	T	C	T	Sox2_MA0143.3	2	1	-	8.676919043985553	2.5582713367092715	CCATTGTG
chr12	116521454	116521455	chr12:116521455:C:T	rs570666916	C	T	C	Sox2_MA0143.3	26	0	-	0	0	.
chr12	116537580	116537581	chr12:116537581:A:G	rs11609872	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr12	116540364	116540365	chr12:116540365:A:G	rs190354538	A	G	A	Sox2_MA0143.3	14	0	-	0	0	.
chr12	116540375	116540376	chr12:116540376:A:G	rs76089293	A	G	A	Sox2_MA0143.3	3	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr12	116562390	116562391	chr12:116562391:G:A	rs8181768	G	A	A	Sox2_MA0143.3	-19	0	-	0	0	.
chr12	116571829	116571830	chr12:116571830:C:T	rs11615308	C	T	C	Sox2_MA0143.3	8	0	+	0	0	.
chr12	116602163	116602164	chr12:116602164:C:G	rs77983747	C	G	C	Sox2_MA0143.3	1	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr12	116624722	116624723	chr12:116624723:C:T	rs79011921	C	T	T	Sox2_MA0143.3	15	0	+	0	0	.
chr12	116759920	116759921	chr12:116759921:T:A	rs145932622	T	A	T	Sox2_MA0143.3	-9	0	+	0	0	.
chr12	116808635	116808636	chr12:116808636:A:G	rs74571812	A	G	A	Sox2_MA0143.3	26	0	-	0	0	.
chr12	116894564	116894565	chr12:116894565:A:T	rs7312900	A	T	T	Sox2_MA0143.3	-20	0	+	0	0	.
chr12	116970409	116970410	chr12:116970410:G:A	rs7954824	G	A	A	Sox2_MA0143.3	-11	0	+	0	0	.
chr12	116987168	116987169	chr12:116987169:C:T	rs7137752	C	T	C	Sox2_MA0143.3	24	0	+	0	0	.
chr12	117169234	117169235	chr12:117169235:A:T	rs11068385	A	T	T	Sox2_MA0143.3	-15	0	-	0	0	.
chr12	117225444	117225445	chr12:117225445:G:A	rs877995	G	A	G	Sox2_MA0143.3	8	0	+	0	0	.
chr12	117309635	117309636	chr12:117309636:G:C	rs10850809	G	C	G	Sox2_MA0143.3	24	0	-	0	0	.
chr12	117494375	117494376	chr12:117494376:A:G	rs56005605	A	G	G	Sox2_MA0143.3	19	0	-	0	0	.
chr12	117577399	117577400	chr12:117577400:C:T	rs816199	C	T	T	Sox2_MA0143.3	18	0	-	0	0	.
chr12	117641512	117641513	chr12:117641513:T:C	rs7968512	T	C	T	Sox2_MA0143.3	9	0	+	0	0	.
chr12	117718272	117718273	chr12:117718273:A:T	rs11068645	A	T	A	Sox2_MA0143.3	24	0	-	0	0	.
chr12	117738516	117738517	chr12:117738517:G:C	rs4767605	G	C	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr12	117790978	117790979	chr12:117790979:C:T	rs4767622	C	T	T	Sox2_MA0143.3	-9	0	-	0	0	.
chr12	117811276	117811277	chr12:117811277:C:A	rs112767679	C	A	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr12	117869787	117869788	chr12:117869788:C:T	rs2592297	C	T	T	Sox2_MA0143.3	0	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr12	117976457	117976458	chr12:117976458:C:T	rs74379043	C	T	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr12	117984087	117984088	chr12:117984088:G:T	rs11834975	G	T	G	Sox2_MA0143.3	11	0	-	0	0	.
chr12	118052702	118052703	chr12:118052703:C:T	rs59687507	C	T	C	Sox2_MA0143.3	0	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr12	118085393	118085394	chr12:118085394:G:A	rs7486649	G	A	g	Sox2_MA0143.3	-9	0	+	0	0	.
chr12	118090051	118090052	chr12:118090052:C:G	rs34898170	C	G	C	Sox2_MA0143.3	-5	0	-	0	0	.
chr12	118194216	118194217	chr12:118194217:T:G	rs17512198	T	G	T	Sox2_MA0143.3	22	0	+	0	0	.
chr12	118335454	118335455	chr12:118335455:G:A	rs74239262	G	A	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr12	118536578	118536579	chr12:118536579:G:A	rs143688134	G	A	G	Sox2_MA0143.3	10	0	-	0	0	.
chr12	118537167	118537168	chr12:118537168:G:T	rs79065652	G	T	G	Sox2_MA0143.3	19	0	-	0	0	.
chr12	118625339	118625340	chr12:118625340:T:A	rs1879412	T	A	T	Sox2_MA0143.3	13	0	-	0	0	.
chr12	118683675	118683676	chr12:118683676:T:C	rs7296420	T	C	T	Sox2_MA0143.3	-20	0	-	0	0	.
chr12	118741409	118741410	chr12:118741410:T:C	rs75922818	T	C	T	Sox2_MA0143.3	27	0	+	0	0	.
chr12	118774476	118774477	chr12:118774477:C:T	rs569932093	C	T	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr12	118980188	118980189	chr12:118980189:C:G	rs12309729	C	G	C	Sox2_MA0143.3	21	0	+	0	0	.
chr12	119071794	119071795	chr12:119071795:T:C	rs78503010	T	C	T	Sox2_MA0143.3	16	0	-	0	0	.
chr12	119071827	119071828	chr12:119071828:C:G	rs955182	C	G	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr12	119080778	119080779	chr12:119080779:C:G	rs1525956	C	G	C	Sox2_MA0143.3	8	0	-	0	0	.
chr12	119148144	119148145	chr12:119148145:A:G	rs2555277	A	G	G	Sox2_MA0143.3	12	0	+	0	0	.
chr12	119327341	119327342	chr12:119327342:A:G	rs4438100	A	G	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr12	119415586	119415587	chr12:119415587:T:C	rs12320164	T	C	T	Sox2_MA0143.3	-17	0	-	0	0	.
chr12	119513667	119513668	chr12:119513668:C:T	rs137874186	C	T	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr12	119545207	119545208	chr12:119545208:T:A	rs1483736769	T	A	T	Sox2_MA0143.3	-12	0	+	0	0	.
chr12	119613444	119613445	chr12:119613445:G:A	rs142690684	G	A	G	Sox2_MA0143.3	17	0	-	0	0	.
chr12	119613463	119613464	chr12:119613464:A:G	rs2893796	A	G	A	Sox2_MA0143.3	-2	0	-	0	0	.
chr12	119935935	119935936	chr12:119935936:G:T	rs12301306	G	T	G	Sox2_MA0143.3	19	0	-	0	0	.
chr12	120012180	120012181	chr12:120012181:G:T	rs12312294	G	T	G	Sox2_MA0143.3	26	0	+	0	0	.
chr12	120180304	120180305	chr12:120180305:C:T	rs9651914	C	T	C	Sox2_MA0143.3	23	0	+	0	0	.
chr12	120244984	120244985	chr12:120244985:G:A	rs1151831	G	A	G	Sox2_MA0143.3	18	0	+	0	0	.
chr12	120246104	120246105	chr12:120246105:G:A	rs7966099	G	A	g	Sox2_MA0143.3	14	0	-	0	0	.
chr12	120291472	120291473	chr12:120291473:C:T	rs1055864001	C	T	C	Sox2_MA0143.3	14	0	-	0	0	.
chr12	120291486	120291487	chr12:120291487:G:C	chr12:120291487:G:C	G	C	G	Sox2_MA0143.3	0	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr12	120365979	120365980	chr12:120365980:C:T	rs2238160	C	T	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr12	120368902	120368903	chr12:120368903:C:G	rs11065094	C	G	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr12	120397848	120397849	chr12:120397849:G:T	rs1031386626	G	T	G	Sox2_MA0143.3	22	0	-	0	0	.
chr12	120586315	120586316	chr12:120586316:C:T	rs61945910	C	T	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr12	120684409	120684410	chr12:120684410:C:T	rs894591104	C	T	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr12	120693926	120693927	chr12:120693927:T:C	chr12:120693927:T:C	T	C	T	Sox2_MA0143.3	-2	0	+	0	0	.
chr12	120718692	120718693	chr12:120718693:G:A	rs34030695	G	A	G	Sox2_MA0143.3	16	0	+	0	0	.
chr12	120740410	120740411	chr12:120740411:C:A	rs189117855	C	A	C	Sox2_MA0143.3	22	0	+	0	0	.
chr12	120890958	120890959	chr12:120890959:G:A	rs7298639	G	A	G	Sox2_MA0143.3	23	0	-	0	0	.
chr12	120899375	120899376	chr12:120899376:T:C	rs2701178	T	C	T	Sox2_MA0143.3	16	0	-	0	0	.
chr12	120939690	120939691	chr12:120939691:G:C	rs10849822	G	C	G	Sox2_MA0143.3	-11	0	+	0	0	.
chr12	121000160	121000161	chr12:121000161:T:C	rs11065389	T	C	T	Sox2_MA0143.3	-9	0	+	0	0	.
chr12	121005312	121005313	chr12:121005313:A:G	rs1169314	A	G	A	Sox2_MA0143.3	10	0	-	0	0	.
chr12	121102542	121102543	chr12:121102543:C:T	rs1796421	C	T	C	Sox2_MA0143.3	7	1	-	8.676919043985553	3.3675628303222993	CCATTGTG
chr12	121102563	121102564	chr12:121102564:T:G	rs1794897	T	G	T	Sox2_MA0143.3	-14	0	-	0	0	.
chr12	121110545	121110546	chr12:121110546:G:C	rs146785905	G	C	G	Sox2_MA0143.3	23	0	-	0	0	.
chr12	121121505	121121506	chr12:121121506:G:A	rs11065440	G	A	G	Sox2_MA0143.3	7	1	+	8.676919043985553	3.3675628303222993	CCATTGTG
chr12	121132132	121132133	chr12:121132133:A:C	rs494986	A	C	A	Sox2_MA0143.3	-15	0	+	0	0	.
chr12	121203821	121203822	chr12:121203822:G:A	rs1169722	G	A	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr12	121211066	121211067	chr12:121211067:C:G	rs2686387	C	G	G	Sox2_MA0143.3	15	0	+	0	0	.
chr12	121223884	121223885	chr12:121223885:C:T	rs11065495	C	T	C	Sox2_MA0143.3	20	0	-	0	0	.
chr12	121414326	121414327	chr12:121414327:G:A	rs11065564	G	A	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr12	121535411	121535412	chr12:121535412:G:A	rs28520411	G	A	G	Sox2_MA0143.3	11	0	-	0	0	.
chr12	121537897	121537898	chr12:121537898:C:T	rs1363290201	C	T	C	Sox2_MA0143.3	-20	0	-	0	0	.
chr12	121568204	121568205	chr12:121568205:G:A	rs28841332	G	A	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr12	121590817	121590818	chr12:121590818:G:A	rs4981002	G	A	G	Sox2_MA0143.3	-12	0	+	0	0	.
chr12	121693561	121693562	chr12:121693562:G:A	rs2954112	G	A	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr12	121767959	121767960	chr12:121767960:T:C	rs28656299	T	C	C	Sox2_MA0143.3	-12	0	-	0	0	.
chr12	121787388	121787389	chr12:121787389:C:T	rs115852415	C	T	C	Sox2_MA0143.3	27	0	+	0	0	.
chr12	121800343	121800344	chr12:121800344:G:C	chr12:121800344:G:C	G	C	G	Sox2_MA0143.3	14	0	-	0	0	.
chr12	121800371	121800372	chr12:121800372:C:T	rs140394366	C	T	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr12	121965531	121965532	chr12:121965532:T:C	rs60620185	T	C	T	Sox2_MA0143.3	14	0	-	0	0	.
chr12	122015171	122015172	chr12:122015172:C:T	rs6486792	C	T	T	Sox2_MA0143.3	20	0	-	0	0	.
chr12	122063659	122063660	chr12:122063660:C:T	rs73417634	C	T	T	Sox2_MA0143.3	23	0	-	0	0	.
chr12	122077068	122077069	chr12:122077069:G:C	rs4128124	G	C	G	Sox2_MA0143.3	27	0	+	0	0	.
chr12	122122211	122122212	chr12:122122212:A:G	rs28683032	A	G	G	Sox2_MA0143.3	-12	0	+	0	0	.
chr12	122122970	122122971	chr12:122122971:C:T	rs12299752	C	T	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr12	122123160	122123161	chr12:122123161:G:A	rs141021291	G	A	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr12	122131246	122131247	chr12:122131247:A:C	rs1432455109	A	C	A	Sox2_MA0143.3	-5	0	+	0	0	.
chr12	122223529	122223530	chr12:122223530:T:A	rs12816499	T	A	T	Sox2_MA0143.3	-13	0	-	0	0	.
chr12	122226006	122226007	chr12:122226007:G:C	rs202028496	G	C	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr12	122226034	122226035	chr12:122226035:G:A	rs1290150	G	A	G	Sox2_MA0143.3	24	0	+	0	0	.
chr12	122282273	122282274	chr12:122282274:C:T	rs76882667	C	T	A	Sox2_MA0143.3	-7	0	+	0	0	.
chr12	122359753	122359754	chr12:122359754:G:A	rs61140498	G	A	G	Sox2_MA0143.3	7	1	-	9.019595766176417	9.613475778572903	CCATTGTC
chr12	122503032	122503033	chr12:122503033:G:C	rs80054969	G	C	G	Sox2_MA0143.3	21	0	-	0	0	.
chr12	122526970	122526971	chr12:122526971:G:C	rs1275341045	G	C	G	Sox2_MA0143.3	1	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr12	122526980	122526981	chr12:122526981:C:G	rs192347049	C	G	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr12	122647276	122647277	chr12:122647277:C:A	rs7954006	C	A	A	Sox2_MA0143.3	5	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr12	122659641	122659642	chr12:122659642:A:G	rs78440611	A	G	A	Sox2_MA0143.3	25	0	-	0	0	.
chr12	122871369	122871370	chr12:122871370:G:A	rs142670389	G	A	g	Sox2_MA0143.3	-2	0	+	0	0	.
chr12	122872646	122872647	chr12:122872647:G:A	rs117317121	G	A	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr12	122877028	122877029	chr12:122877029:A:G	rs79176129	A	G	A	Sox2_MA0143.3	26	0	-	0	0	.
chr12	122943025	122943026	chr12:122943026:A:G	rs11060881	A	G	A	Sox2_MA0143.3	2	1	-	8.864090315184848	2.5582713367092715	CCTTTGTG
chr12	123110516	123110517	chr12:123110517:G:A	rs12423255	G	A	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr12	123152293	123152294	chr12:123152294:A:G	rs1790108	A	G	G	Sox2_MA0143.3	18	0	-	0	0	.
chr12	123235037	123235038	chr12:123235038:G:C	rs4759409	G	C	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr12	123250933	123250934	chr12:123250934:T:G	rs186926579	T	G	T	Sox2_MA0143.3	20	0	+	0	0	.
chr12	123273687	123273688	chr12:123273688:C:G	rs7953929	C	G	C	Sox2_MA0143.3	21	0	+	0	0	.
chr12	123281889	123281890	chr12:123281890:A:G	rs10444439	A	G	G	Sox2_MA0143.3	-5	0	+	0	0	.
chr12	123413821	123413822	chr12:123413822:G:C	rs28817269	G	C	g	Sox2_MA0143.3	26	0	-	0	0	.
chr12	123645580	123645581	chr12:123645581:T:C	rs2292702	T	C	T	Sox2_MA0143.3	13	0	+	0	0	.
chr12	123712786	123712787	chr12:123712787:C:T	rs556352070	C	T	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr12	123723946	123723947	chr12:123723947:C:T	rs117637145	C	T	c	Sox2_MA0143.3	-6	0	-	0	0	.
chr12	123816352	123816353	chr12:123816353:G:C	rs113688028	G	C	G	Sox2_MA0143.3	24	0	-	0	0	.
chr12	123845892	123845893	chr12:123845893:G:A	rs4930728	G	A	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr12	123906947	123906948	chr12:123906948:C:T	rs34587940	C	T	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr12	123941925	123941926	chr12:123941926:G:A	rs7980102	G	A	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr12	123942678	123942679	chr12:123942679:A:G	rs114614909	A	G	A	Sox2_MA0143.3	25	0	-	0	0	.
chr12	123945466	123945467	chr12:123945467:A:G	rs6488911	A	G	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr12	123973972	123973973	chr12:123973973:C:T	rs1041263065	C	T	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr12	123974203	123974204	chr12:123974204:C:T	rs180753014	C	T	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr12	124054092	124054093	chr12:124054093:A:G	rs559568814	A	G	A	Sox2_MA0143.3	-15	0	-	0	0	.
chr12	124077255	124077256	chr12:124077256:C:T	rs825461	C	T	c	Sox2_MA0143.3	23	0	-	0	0	.
chr12	124106838	124106839	chr12:124106839:A:G	rs825490	A	G	A	Sox2_MA0143.3	-10	0	-	0	0	.
chr12	124123706	124123707	chr12:124123707:A:G	rs73221471	A	G	A	Sox2_MA0143.3	8	0	-	0	0	.
chr12	124123708	124123709	chr12:124123709:A:G	rs139728021	A	G	A	Sox2_MA0143.3	6	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr12	124150566	124150567	chr12:124150567:T:C	rs10744167	T	C	T	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr12	124171747	124171748	chr12:124171748:G:A	rs76907596	G	A	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr12	124238674	124238675	chr12:124238675:C:T	rs79133148	C	T	C	Sox2_MA0143.3	0	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr12	124292623	124292624	chr12:124292624:C:A	rs7294926	C	A	A	Sox2_MA0143.3	1	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr12	124293611	124293612	chr12:124293612:G:A	rs191425088	G	A	G	Sox2_MA0143.3	21	0	+	0	0	.
chr12	124321988	124321989	chr12:124321989:G:A	rs77695745	G	A	G	Sox2_MA0143.3	12	0	+	0	0	.
chr12	124393021	124393022	chr12:124393022:G:A	rs745945910	G	A	.	Sox2_MA0143.3	22	0	-	0	0	.
chr12	124393063	124393064	chr12:124393064:A:G	rs951976	A	G	.	Sox2_MA0143.3	-20	0	-	0	0	.
chr12	124448091	124448092	chr12:124448092:A:G	rs55856606	A	G	G	Sox2_MA0143.3	22	0	+	0	0	.
chr12	124508183	124508184	chr12:124508184:C:G	rs191490493	C	G	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr12	124513214	124513215	chr12:124513215:T:C	rs7300677	T	C	T	Sox2_MA0143.3	17	0	-	0	0	.
chr12	124579712	124579713	chr12:124579713:T:G	rs696841	T	G	T	Sox2_MA0143.3	6	1	+	9.019595766176417	2.110840986861197	CCATTGTC
chr12	124581562	124581563	chr12:124581563:C:T	rs79656174	C	T	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr12	124631220	124631221	chr12:124631221:A:G	rs2141104	A	G	A	Sox2_MA0143.3	4	1	-	3.5547341015215945	-3.3540206777936254	CCTTTGTA
chr12	124695032	124695033	chr12:124695033:C:T	rs10773100	C	T	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr12	124727308	124727309	chr12:124727309:T:C	rs117489190	T	C	T	Sox2_MA0143.3	22	0	-	0	0	.
chr12	124727345	124727346	chr12:124727346:G:C	rs188796301	G	C	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr12	124732842	124732843	chr12:124732843:G:A	rs548625715	G	A	G	Sox2_MA0143.3	15	0	-	0	0	.
chr12	124854340	124854341	chr12:124854341:C:G	rs4765626	C	G	G	Sox2_MA0143.3	25	0	+	0	0	.
chr12	124873749	124873750	chr12:124873750:T:G	rs11057875	T	G	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr12	124916859	124916860	chr12:124916860:A:G	rs116316421	A	G	A	Sox2_MA0143.3	3	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr12	124917067	124917068	chr12:124917068:A:C	rs182855960	A	C	A	Sox2_MA0143.3	26	0	-	0	0	.
chr12	124917093	124917094	chr12:124917094:G:A	rs111790165	G	A	G	Sox2_MA0143.3	0	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr12	124917403	124917404	chr12:124917404:G:C	rs1027143635	G	C	G	Sox2_MA0143.3	17	0	-	0	0	.
chr12	124956812	124956813	chr12:124956813:T:C	rs10773127	T	C	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr12	124966940	124966941	chr12:124966941:C:T	rs35364982	C	T	T	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr12	125003252	125003253	chr12:125003253:C:T	rs114679705	C	T	C	Sox2_MA0143.3	16	0	+	0	0	.
chr12	125003253	125003254	chr12:125003254:C:G	rs11057976	C	G	C	Sox2_MA0143.3	17	0	+	0	0	.
chr12	125105808	125105809	chr12:125105809:C:T	rs76353490	C	T	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr12	125289559	125289560	chr12:125289560:A:C	rs73233340	A	C	A	Sox2_MA0143.3	6	1	-	9.019595766176417	2.110840986861197	CCATTGTC
chr12	125312202	125312203	chr12:125312203:G:A	rs34515519	G	A	G	Sox2_MA0143.3	21	0	+	0	0	.
chr12	125329840	125329841	chr12:125329841:C:T	rs2291929	C	T	T	Sox2_MA0143.3	13	0	-	0	0	.
chr12	125374460	125374461	chr12:125374461:A:G	rs325086	A	G	A	Sox2_MA0143.3	13	0	+	0	0	.
chr12	125486820	125486821	chr12:125486821:G:A	rs4765043	G	A	A	Sox2_MA0143.3	-18	0	+	0	0	.
chr12	125712211	125712212	chr12:125712212:C:T	rs10846955	C	T	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr12	125740866	125740867	chr12:125740867:C:A	rs11058314	C	A	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr12	125833277	125833278	chr12:125833278:G:T	rs2345779	G	T	G	Sox2_MA0143.3	5	1	+	9.613475778572903	2.7047209992576837	CCATTGTT
chr12	125856310	125856311	chr12:125856311:T:C	rs11832944	T	C	T	Sox2_MA0143.3	2	1	-	8.676919043985553	2.5582713367092715	CCATTGTG
chr12	125907906	125907907	chr12:125907907:G:T	rs12427418	G	T	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr12	126271034	126271035	chr12:126271035:C:T	rs7308181	C	T	C	Sox2_MA0143.3	21	0	+	0	0	.
chr12	126384183	126384184	chr12:126384184:C:T	rs77781481	C	T	C	Sox2_MA0143.3	21	0	+	0	0	.
chr12	126419752	126419753	chr12:126419753:T:A	rs17500894	T	A	T	Sox2_MA0143.3	-13	0	-	0	0	.
chr12	126727213	126727214	chr12:126727214:A:G	rs144825635	A	G	A	Sox2_MA0143.3	6	1	-	9.613475778572903	2.7047209992576837	CCATTGTT
chr12	126874294	126874295	chr12:126874295:G:A	rs1166235	G	A	A	Sox2_MA0143.3	10	0	+	0	0	.
chr12	126901083	126901084	chr12:126901084:A:C	chr12:126901084:A:C	A	C	a	Sox2_MA0143.3	25	0	+	0	0	.
chr12	126952392	126952393	chr12:126952393:G:A	rs12582678	G	A	G	Sox2_MA0143.3	12	0	-	0	0	.
chr12	127007142	127007143	chr12:127007143:C:T	rs11058908	C	T	c	Sox2_MA0143.3	-13	0	+	0	0	.
chr12	127118502	127118503	chr12:127118503:A:G	rs12306064	A	G	A	Sox2_MA0143.3	3	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr12	127120068	127120069	chr12:127120069:A:G	rs2248246	A	G	G	Sox2_MA0143.3	-11	0	+	0	0	.
chr12	127144918	127144919	chr12:127144919:T:C	rs2569804	T	C	T	Sox2_MA0143.3	4	1	+	9.800647049772198	2.8918922704569785	CCTTTGTT
chr12	127168654	127168655	chr12:127168655:A:G	rs4765131	A	G	A	Sox2_MA0143.3	-6	0	-	0	0	.
chr12	127276236	127276237	chr12:127276237:C:T	rs906731	C	T	T	Sox2_MA0143.3	-18	0	-	0	0	.
chr12	127285287	127285288	chr12:127285288:G:A	rs1224098670	G	A	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr12	127429022	127429023	chr12:127429023:T:A	rs1038513	T	A	T	Sox2_MA0143.3	-14	0	+	0	0	.
chr12	127594896	127594897	chr12:127594897:C:T	rs1690088	C	T	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr12	127640110	127640111	chr12:127640111:T:A	rs73230573	T	A	T	Sox2_MA0143.3	22	0	+	0	0	.
chr12	127679165	127679166	chr12:127679166:C:T	rs117572354	C	T	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr12	127786316	127786317	chr12:127786317:C:T	rs115843754	C	T	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr12	127819760	127819761	chr12:127819761:C:T	rs73420013	C	T	C	Sox2_MA0143.3	26	0	-	0	0	.
chr12	127854101	127854102	chr12:127854102:T:G	rs10773437	T	G	G	Sox2_MA0143.3	11	0	+	0	0	.
chr12	127894131	127894132	chr12:127894132:G:A	rs79183360	G	A	G	Sox2_MA0143.3	27	0	+	0	0	.
chr12	128026418	128026419	chr12:128026419:C:T	rs1852878	C	T	c	Sox2_MA0143.3	-1	0	-	0	0	.
chr12	128029582	128029583	chr12:128029583:C:T	rs1852880	C	T	T	Sox2_MA0143.3	-4	0	+	0	0	.
chr12	128055791	128055792	chr12:128055792:G:A	rs547451818	G	A	G	Sox2_MA0143.3	24	0	-	0	0	.
chr12	128055800	128055801	chr12:128055801:G:C	rs6489229	G	C	G	Sox2_MA0143.3	15	0	-	0	0	.
chr12	128077880	128077881	chr12:128077881:A:G	rs9795802	A	G	A	Sox2_MA0143.3	6	1	-	9.019595766176417	2.110840986861197	CCATTGTC
chr12	128090016	128090017	chr12:128090017:C:T	rs10773485	C	T	C	Sox2_MA0143.3	22	0	+	0	0	.
chr12	128165572	128165573	chr12:128165573:A:T	rs61939538	A	T	A	Sox2_MA0143.3	6	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr12	128298220	128298221	chr12:128298221:G:A	rs1193371	G	A	A	Sox2_MA0143.3	11	0	+	0	0	.
chr12	128382181	128382182	chr12:128382182:C:T	rs149766577	C	T	C	Sox2_MA0143.3	20	0	+	0	0	.
chr12	128384175	128384176	chr12:128384176:T:C	rs151280762	T	C	T	Sox2_MA0143.3	22	0	-	0	0	.
chr12	128421601	128421602	chr12:128421602:G:A	rs7966957	G	A	A	Sox2_MA0143.3	-3	0	-	0	0	.
chr12	128421615	128421616	chr12:128421616:C:A	rs77820016	C	A	A	Sox2_MA0143.3	-17	0	-	0	0	.
chr12	128449704	128449705	chr12:128449705:G:A	rs11059698	G	A	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr12	128458526	128458527	chr12:128458527:G:A	rs141668266	G	A	g	Sox2_MA0143.3	11	0	+	0	0	.
chr12	128612001	128612002	chr12:128612002:G:A	rs1532103	G	A	A	Sox2_MA0143.3	13	0	-	0	0	.
chr12	128650310	128650311	chr12:128650311:A:G	rs74612343	A	G	A	Sox2_MA0143.3	21	0	+	0	0	.
chr12	128697523	128697524	chr12:128697524:G:A	rs883054	G	A	A	Sox2_MA0143.3	11	0	-	0	0	.
chr12	128702883	128702884	chr12:128702884:G:T	rs7302992	G	T	G	Sox2_MA0143.3	8	0	-	0	0	.
chr12	128741448	128741449	chr12:128741449:C:A	rs59297323	C	A	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr12	128798603	128798604	chr12:128798604:T:C	rs7960920	T	C	T	Sox2_MA0143.3	24	0	-	0	0	.
chr12	128810335	128810336	chr12:128810336:A:C	rs10773579	A	C	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr12	128813671	128813672	chr12:128813672:G:A	rs184675623	G	A	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr12	128818308	128818309	chr12:128818309:G:C	rs993281766	G	C	G	Sox2_MA0143.3	-11	0	+	0	0	.
chr12	128818321	128818322	chr12:128818322:A:T	rs12321643	A	T	A	Sox2_MA0143.3	2	1	+	9.019595766176417	9.206767037375712	CCATTGTC
chr12	128818324	128818325	chr12:128818325:G:C	rs56290671	G	C	G	Sox2_MA0143.3	5	1	+	9.019595766176417	2.110840986861197	CCATTGTC
chr12	128939878	128939879	chr12:128939879:A:G	rs527990293	A	G	a	Sox2_MA0143.3	13	0	-	0	0	.
chr12	128945670	128945671	chr12:128945671:A:G	rs61945047	A	G	a	Sox2_MA0143.3	21	0	+	0	0	.
chr12	128946065	128946066	chr12:128946066:T:G	rs75991751	T	G	g	Sox2_MA0143.3	-17	0	-	0	0	.
chr12	128992340	128992341	chr12:128992341:G:A	rs11060059	G	A	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr12	129151161	129151162	chr12:129151162:G:A	rs12303223	G	A	G	Sox2_MA0143.3	13	0	+	0	0	.
chr12	129151165	129151166	chr12:129151166:G:A	rs10847784	G	A	G	Sox2_MA0143.3	17	0	+	0	0	.
chr12	129153019	129153020	chr12:129153020:C:G	rs74899892	C	G	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr12	129184378	129184379	chr12:129184379:C:A	rs11608618	C	A	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr12	129208870	129208871	chr12:129208871:G:A	rs7970426	G	A	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr12	129270145	129270146	chr12:129270146:G:A	rs80238251	G	A	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr12	129292298	129292299	chr12:129292299:G:C	rs10773630	G	C	G	Sox2_MA0143.3	18	0	-	0	0	.
chr12	129369114	129369115	chr12:129369115:C:T	rs11060283	C	T	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr12	129372976	129372977	chr12:129372977:G:A	rs78279607	G	A	G	Sox2_MA0143.3	27	0	-	0	0	.
chr12	129495347	129495348	chr12:129495348:G:T	rs1388903	G	T	G	Sox2_MA0143.3	1	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr12	129550503	129550504	chr12:129550504:T:G	rs12229381	T	G	T	Sox2_MA0143.3	20	0	+	0	0	.
chr12	129607642	129607643	chr12:129607643:T:A	rs74433251	T	A	T	Sox2_MA0143.3	-18	0	-	0	0	.
chr12	129657944	129657945	chr12:129657945:G:T	rs616903	G	T	G	Sox2_MA0143.3	25	0	+	0	0	.
chr12	129676155	129676156	chr12:129676156:G:A	rs142386984	G	A	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr12	129726548	129726549	chr12:129726549:G:T	rs61945202	G	T	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr12	129734908	129734909	chr12:129734909:C:G	rs7136543	C	G	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr12	129809575	129809576	chr12:129809576:T:A	rs7953819	T	A	T	Sox2_MA0143.3	-18	0	+	0	0	.
chr12	129937868	129937869	chr12:129937869:T:C	rs867567	T	C	T	Sox2_MA0143.3	20	0	-	0	0	.
chr12	130013324	130013325	chr12:130013325:C:A	rs72488107	C	A	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr12	130086440	130086441	chr12:130086441:G:T	rs79777049	G	T	t	Sox2_MA0143.3	-15	0	+	0	0	.
chr12	130429596	130429597	chr12:130429597:A:G	rs12321985	A	G	G	Sox2_MA0143.3	18	0	-	0	0	.
chr12	130441887	130441888	chr12:130441888:C:T	rs143237813	C	T	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr12	130561272	130561273	chr12:130561273:T:A	rs10744468	T	A	T	Sox2_MA0143.3	6	1	+	9.206767037375712	2.298012258060492	CCTTTGTC
chr12	130651685	130651686	chr12:130651686:C:T	rs71448218	C	T	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr12	130752921	130752922	chr12:130752922:C:T	rs2695914	C	T	t	Sox2_MA0143.3	17	0	+	0	0	.
chr12	130752929	130752930	chr12:130752930:C:A	rs2695913	C	A	c	Sox2_MA0143.3	25	0	+	0	0	.
chr12	130790938	130790939	chr12:130790939:G:A	rs13155	G	A	A	Sox2_MA0143.3	22	0	-	0	0	.
chr12	130803746	130803747	chr12:130803747:T:C	rs2037789	T	C	T	Sox2_MA0143.3	-18	0	-	0	0	.
chr12	130826377	130826378	chr12:130826378:C:A	rs763504649	C	A	C	Sox2_MA0143.3	24	0	+	0	0	.
chr12	130826378	130826379	chr12:130826379:G:A	rs184986733	G	A	G	Sox2_MA0143.3	25	0	+	0	0	.
chr12	130872491	130872492	chr12:130872492:G:A	rs906359601	G	A	G	Sox2_MA0143.3	9	0	+	0	0	.
chr12	130985947	130985948	chr12:130985948:C:T	rs375118068	C	T	C	Sox2_MA0143.3	0	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr12	131007137	131007138	chr12:131007138:G:T	rs4759826	G	T	T	Sox2_MA0143.3	9	0	-	0	0	.
chr12	131035157	131035158	chr12:131035158:C:G	rs10848271	C	G	C	Sox2_MA0143.3	25	0	+	0	0	.
chr12	131042755	131042756	chr12:131042756:G:T	rs12370258	G	T	G	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr12	131057488	131057489	chr12:131057489:G:A	rs111683404	G	A	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr12	131082619	131082620	chr12:131082620:A:G	rs35248862	A	G	A	Sox2_MA0143.3	14	0	-	0	0	.
chr12	131099861	131099862	chr12:131099862:A:G	rs1727353	A	G	G	Sox2_MA0143.3	-5	0	+	0	0	.
chr12	131100992	131100993	chr12:131100993:G:A	rs1725804	G	A	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr12	131104030	131104031	chr12:131104031:T:C	rs536337690	T	C	T	Sox2_MA0143.3	-17	0	+	0	0	.
chr12	131120897	131120898	chr12:131120898:C:T	rs11610576	C	T	C	Sox2_MA0143.3	16	0	+	0	0	.
chr12	131143386	131143387	chr12:131143387:A:G	rs4759851	A	G	A	Sox2_MA0143.3	2	1	+	9.019595766176417	2.900948058900136	CCATTGTC
chr12	131143411	131143412	chr12:131143412:G:A	rs11061345	G	A	A	Sox2_MA0143.3	27	0	+	0	0	.
chr12	131273508	131273509	chr12:131273509:G:T	rs115889994	G	T	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr12	131293888	131293889	chr12:131293889:A:G	rs374516675	A	G	-	Sox2_MA0143.3	-16	0	+	0	0	.
chr12	131341069	131341070	chr12:131341070:G:A	rs186431884	G	A	g	Sox2_MA0143.3	23	0	-	0	0	.
chr12	131384533	131384534	chr12:131384534:T:C	rs7958729	T	C	t	Sox2_MA0143.3	9	0	+	0	0	.
chr12	131390801	131390802	chr12:131390802:G:A	rs73153764	G	A	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr12	131429908	131429909	chr12:131429909:A:C	rs11061526	A	C	A	Sox2_MA0143.3	13	0	+	0	0	.
chr12	131479792	131479793	chr12:131479793:T:G	rs141224517	T	G	T	Sox2_MA0143.3	-14	0	-	0	0	.
chr12	131486009	131486010	chr12:131486010:A:G	rs11061559	A	G	a	Sox2_MA0143.3	-4	0	+	0	0	.
chr12	131486023	131486024	chr12:131486024:C:G	rs10848403	C	G	C	Sox2_MA0143.3	10	0	+	0	0	.
chr12	131488813	131488814	chr12:131488814:G:T	rs10848405	G	T	T	Sox2_MA0143.3	23	0	+	0	0	.
chr12	131574966	131574967	chr12:131574967:A:G	rs10751698	A	G	G	Sox2_MA0143.3	16	0	+	0	0	.
chr12	131597292	131597293	chr12:131597293:A:G	rs7485158	A	G	A	Sox2_MA0143.3	20	0	+	0	0	.
chr12	131616093	131616094	chr12:131616094:A:C	rs12825741	A	C	A	Sox2_MA0143.3	10	0	+	0	0	.
chr12	131625002	131625003	chr12:131625003:A:G	rs7305502	A	G	A	Sox2_MA0143.3	-9	0	+	0	0	.
chr12	131640947	131640948	chr12:131640948:C:A	rs74923546	C	A	C	Sox2_MA0143.3	5	1	-	9.019595766176417	2.110840986861197	CCATTGTC
chr12	131640958	131640959	chr12:131640959:G:A	rs10794473	G	A	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr12	131678798	131678799	chr12:131678799:C:T	rs76587326	C	T	C	Sox2_MA0143.3	25	0	-	0	0	.
chr12	131709184	131709185	chr12:131709185:T:C	rs35189217	T	C	T	Sox2_MA0143.3	26	0	-	0	0	.
chr12	131804346	131804347	chr12:131804347:T:A	rs114519591	T	A	T	Sox2_MA0143.3	-12	0	+	0	0	.
chr12	131830706	131830707	chr12:131830707:C:G	rs1031626415	C	G	c	Sox2_MA0143.3	14	0	+	0	0	.
chr12	131868127	131868128	chr12:131868128:C:A	rs60510169	C	A	C	Sox2_MA0143.3	21	0	+	0	0	.
chr12	131943317	131943318	chr12:131943318:C:T	chr12:131943318:C:T	C	T	C	Sox2_MA0143.3	10	0	-	0	0	.
chr12	132049819	132049820	chr12:132049820:C:G	rs117461847	C	G	G	Sox2_MA0143.3	17	0	+	0	0	.
chr12	132120360	132120361	chr12:132120361:T:C	rs12303787	T	C	C	Sox2_MA0143.3	10	0	-	0	0	.
chr12	132227359	132227360	chr12:132227360:C:T	rs923363521	C	T	c	Sox2_MA0143.3	-17	0	-	0	0	.
chr12	132250822	132250823	chr12:132250823:C:T	rs113737828	C	T	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr12	132309747	132309748	chr12:132309748:A:G	rs28520797	A	G	G	Sox2_MA0143.3	2	1	+	8.676919043985553	2.5582713367092715	CCATTGTG
chr12	132356592	132356593	chr12:132356593:C:T	rs141905080	C	T	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr12	132361206	132361207	chr12:132361207:G:T	rs28483478	G	T	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr12	132374741	132374742	chr12:132374742:G:A	rs118103572	G	A	G	Sox2_MA0143.3	18	0	-	0	0	.
chr12	132381903	132381904	chr12:132381904:A:G	rs28607602	A	G	-	Sox2_MA0143.3	9	0	-	0	0	.
chr12	132427691	132427692	chr12:132427692:A:G	rs28566046	A	G	g	Sox2_MA0143.3	12	0	-	0	0	.
chr12	132427702	132427703	chr12:132427703:G:A	rs28698526	G	A	g	Sox2_MA0143.3	1	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr12	132444096	132444097	chr12:132444097:G:A	rs12314373	G	A	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr12	132480517	132480518	chr12:132480518:C:T	rs61951157	C	T	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr12	132485880	132485881	chr12:132485881:G:A	rs1921533	G	A	G	Sox2_MA0143.3	20	0	+	0	0	.
chr12	132493707	132493708	chr12:132493708:C:T	rs11614914	C	T	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr12	132583568	132583569	chr12:132583569:T:G	rs754047403	T	G	G	Sox2_MA0143.3	22	0	-	0	0	.
chr12	132609086	132609087	chr12:132609087:A:G	rs2323973	A	G	g	Sox2_MA0143.3	6	1	-	8.676919043985553	1.7681642646703326	CCATTGTG
chr12	132635003	132635004	chr12:132635004:C:T	rs5745001	C	T	T	Sox2_MA0143.3	19	0	-	0	0	.
chr12	132635010	132635011	chr12:132635011:G:C	rs5745000	G	C	C	Sox2_MA0143.3	12	0	-	0	0	.
chr12	132658745	132658746	chr12:132658746:T:G	rs5744873	T	G	G	Sox2_MA0143.3	3	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr12	132818711	132818712	chr12:132818712:A:G	rs57166543	A	G	A	Sox2_MA0143.3	4	1	-	3.5547341015215945	-3.3540206777936254	CCTTTGTA
chr12	132886499	132886500	chr12:132886500:C:A	rs7136785	C	A	T	Sox2_MA0143.3	23	0	-	0	0	.
chr12	132949511	132949512	chr12:132949512:C:T	rs376612803	C	T	C	Sox2_MA0143.3	0	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr12	133037432	133037433	chr12:133037433:G:A	rs10870574	G	A	G	Sox2_MA0143.3	13	0	-	0	0	.
chr12	133130698	133130699	chr12:133130699:C:T	rs73162464	C	T	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr12	133181513	133181514	chr12:133181514:G:A	rs11147282	G	A	G	Sox2_MA0143.3	5	1	+	9.613475778572903	2.7047209992576837	CCATTGTT
chr12	133181533	133181534	chr12:133181534:T:A	rs75364316	T	A	t	Sox2_MA0143.3	25	0	+	0	0	.
chr13	17022398	17022399	chr13:17022399:C:A	rs1372531393	C	A	.	Sox2_MA0143.3	-2	0	+	0	0	.
chr13	17328284	17328285	chr13:17328285:C:T	rs1259736258	C	T	.	Sox2_MA0143.3	1	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr13	18259425	18259426	chr13:18259426:A:G	rs9578028	A	G	.	Sox2_MA0143.3	2	1	-	3.5547341015215945	-2.751084876953981	CCTTTGTA
chr13	18836798	18836799	chr13:18836799:A:G	rs9510119	A	G	.	Sox2_MA0143.3	4	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr13	18837489	18837490	chr13:18837490:G:A	rs11840641	G	A	.	Sox2_MA0143.3	22	0	-	0	0	.
chr13	18837514	18837515	chr13:18837515:G:A	rs1312745567	G	A	.	Sox2_MA0143.3	-3	0	-	0	0	.
chr13	18837520	18837521	chr13:18837521:A:G	rs7334168	A	G	.	Sox2_MA0143.3	-9	0	-	0	0	.
chr13	18952806	18952807	chr13:18952807:T:C	rs13378194	T	C	.	Sox2_MA0143.3	27	0	+	0	0	.
chr13	19011813	19011814	chr13:19011814:A:G	rs4769321	A	G	G	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr13	19057327	19057328	chr13:19057328:A:G	rs2343711	A	G	A	Sox2_MA0143.3	-10	0	-	0	0	.
chr13	19059725	19059726	chr13:19059726:A:G	rs73427835	A	G	A	Sox2_MA0143.3	-19	0	+	0	0	.
chr13	19059766	19059767	chr13:19059767:T:C	rs9511356	T	C	T	Sox2_MA0143.3	22	0	+	0	0	.
chr13	19076992	19076993	chr13:19076993:G:A	rs7986712	G	A	A	Sox2_MA0143.3	5	1	+	9.613475778572903	2.7047209992576837	CCATTGTT
chr13	19110872	19110873	chr13:19110873:A:G	rs60129707	A	G	A	Sox2_MA0143.3	4	1	-	9.800647049772198	2.8918922704569785	CCTTTGTT
chr13	19141671	19141672	chr13:19141672:A:G	rs9319222	A	G	G	Sox2_MA0143.3	10	0	-	0	0	.
chr13	19150965	19150966	chr13:19150966:A:G	rs147828257	A	G	A	Sox2_MA0143.3	3	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr13	19170707	19170708	chr13:19170708:A:G	rs638773	A	G	A	Sox2_MA0143.3	19	0	+	0	0	.
chr13	19171762	19171763	chr13:19171763:A:G	rs9507552	A	G	A	Sox2_MA0143.3	-14	0	-	0	0	.
chr13	19188522	19188523	chr13:19188523:C:T	rs2774489	C	T	c	Sox2_MA0143.3	0	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr13	19862390	19862391	chr13:19862391:C:A	rs968269132	C	A	C	Sox2_MA0143.3	12	0	-	0	0	.
chr13	20120616	20120617	chr13:20120617:A:C	chr13:20120617:A:C	A	C	A	Sox2_MA0143.3	-5	0	-	0	0	.
chr13	20406130	20406131	chr13:20406131:A:G	rs566588526	A	G	A	Sox2_MA0143.3	6	1	-	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr13	20460952	20460953	chr13:20460953:A:G	rs9509229	A	G	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr13	20526562	20526563	chr13:20526563:G:A	rs17554278	G	A	A	Sox2_MA0143.3	25	0	+	0	0	.
chr13	20728207	20728208	chr13:20728208:C:T	rs2922799	C	T	C	Sox2_MA0143.3	11	0	+	0	0	.
chr13	20795842	20795843	chr13:20795843:T:C	rs2763002	T	C	T	Sox2_MA0143.3	26	0	+	0	0	.
chr13	20939924	20939925	chr13:20939925:C:T	chr13:20939925:C:T	C	T	C	Sox2_MA0143.3	23	0	-	0	0	.
chr13	20969538	20969539	chr13:20969539:G:A	rs629090	G	A	G	Sox2_MA0143.3	18	0	-	0	0	.
chr13	20969545	20969546	chr13:20969546:C:A	rs7326823	C	A	C	Sox2_MA0143.3	11	0	-	0	0	.
chr13	21043866	21043867	chr13:21043867:C:A	rs17061778	C	A	C	Sox2_MA0143.3	0	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr13	21107481	21107482	chr13:21107482:A:T	rs7983740	A	T	A	Sox2_MA0143.3	-16	0	-	0	0	.
chr13	21115589	21115590	chr13:21115590:G:A	rs7987628	G	A	A	Sox2_MA0143.3	11	0	-	0	0	.
chr13	21115860	21115861	chr13:21115861:G:A	rs74686907	G	A	A	Sox2_MA0143.3	-2	0	+	0	0	.
chr13	21139834	21139835	chr13:21139835:G:C	chr13:21139835:G:C	G	C	G	Sox2_MA0143.3	18	0	+	0	0	.
chr13	21242924	21242925	chr13:21242925:C:A	rs146288549	C	A	c	Sox2_MA0143.3	-18	0	+	0	0	.
chr13	21327476	21327477	chr13:21327477:C:G	rs4770134	C	G	G	Sox2_MA0143.3	24	0	-	0	0	.
chr13	21344631	21344632	chr13:21344632:C:T	rs7337694	C	T	C	Sox2_MA0143.3	27	0	+	0	0	.
chr13	21657580	21657581	chr13:21657581:C:A	rs9509830	C	A	C	Sox2_MA0143.3	12	0	-	0	0	.
chr13	21657584	21657585	chr13:21657585:G:T	rs263927	G	T	T	Sox2_MA0143.3	8	0	-	0	0	.
chr13	21681027	21681028	chr13:21681028:C:T	rs3818460	C	T	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr13	21730076	21730077	chr13:21730077:C:T	rs670821	C	T	C	Sox2_MA0143.3	10	0	-	0	0	.
chr13	21740006	21740007	chr13:21740007:T:C	rs9506725	T	C	T	Sox2_MA0143.3	15	0	+	0	0	.
chr13	21841472	21841473	chr13:21841473:C:T	rs9506741	C	T	T	Sox2_MA0143.3	14	0	-	0	0	.
chr13	21880442	21880443	chr13:21880443:G:A	rs4770215	G	A	G	Sox2_MA0143.3	0	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr13	21880726	21880727	chr13:21880727:G:T	rs17072999	G	T	G	Sox2_MA0143.3	-11	0	+	0	0	.
chr13	21883983	21883984	chr13:21883984:T:G	rs73162305	T	G	T	Sox2_MA0143.3	-2	0	+	0	0	.
chr13	21908644	21908645	chr13:21908645:C:T	rs9316605	C	T	T	Sox2_MA0143.3	-18	0	+	0	0	.
chr13	21926389	21926390	chr13:21926390:T:C	rs4769180	T	C	T	Sox2_MA0143.3	8	0	-	0	0	.
chr13	22017181	22017182	chr13:22017182:C:T	rs73164473	C	T	C	Sox2_MA0143.3	-5	0	-	0	0	.
chr13	22114914	22114915	chr13:22114915:T:G	rs115292969	T	G	t	Sox2_MA0143.3	-4	0	+	0	0	.
chr13	22200888	22200889	chr13:22200889:C:G	rs17379813	C	G	C	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr13	22210206	22210207	chr13:22210207:A:T	rs57646239	A	T	A	Sox2_MA0143.3	-8	0	+	0	0	.
chr13	22642334	22642335	chr13:22642335:G:T	rs17077287	G	T	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr13	22647208	22647209	chr13:22647209:T:G	rs17319068	T	G	T	Sox2_MA0143.3	-3	0	-	0	0	.
chr13	22703878	22703879	chr13:22703879:A:G	rs314875	A	G	A	Sox2_MA0143.3	23	0	-	0	0	.
chr13	22703989	22703990	chr13:22703990:C:A	rs17320705	C	A	C	Sox2_MA0143.3	21	0	+	0	0	.
chr13	22735382	22735383	chr13:22735383:T:A	rs183011293	T	A	T	Sox2_MA0143.3	-19	0	+	0	0	.
chr13	22792782	22792783	chr13:22792783:G:A	rs1322281383	G	A	G	Sox2_MA0143.3	19	0	-	0	0	.
chr13	22848733	22848734	chr13:22848734:A:G	rs111742106	A	G	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr13	22894198	22894199	chr13:22894199:A:G	rs2104560	A	G	G	Sox2_MA0143.3	20	0	+	0	0	.
chr13	23038505	23038506	chr13:23038506:G:A	rs1170698	G	A	A	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr13	23069810	23069811	chr13:23069811:A:G	rs547730642	A	G	A	Sox2_MA0143.3	13	0	-	0	0	.
chr13	23087167	23087168	chr13:23087168:C:G	rs4770387	C	G	C	Sox2_MA0143.3	5	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr13	23156145	23156146	chr13:23156146:T:C	rs9510603	T	C	-	Sox2_MA0143.3	-17	0	-	0	0	.
chr13	23158059	23158060	chr13:23158060:C:T	rs727081	C	T	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr13	23221824	23221825	chr13:23221825:C:G	rs61946662	C	G	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr13	23433643	23433644	chr13:23433644:C:T	rs73154650	C	T	C	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr13	23461783	23461784	chr13:23461784:G:A	rs75661462	G	A	G	Sox2_MA0143.3	0	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr13	23461796	23461797	chr13:23461797:C:T	rs1999547	C	T	T	Sox2_MA0143.3	-13	0	-	0	0	.
chr13	23471245	23471246	chr13:23471246:G:A	rs74434951	G	A	G	Sox2_MA0143.3	11	0	-	0	0	.
chr13	23509788	23509789	chr13:23509789:T:G	rs7993136	T	G	T	Sox2_MA0143.3	6	1	+	8.676919043985553	1.7681642646703326	CCATTGTG
chr13	23519799	23519800	chr13:23519800:A:T	rs7332482	A	T	T	Sox2_MA0143.3	-7	0	-	0	0	.
chr13	23632488	23632489	chr13:23632489:A:G	rs9553022	A	G	A	Sox2_MA0143.3	2	1	+	9.613475778572903	3.494828071296623	CCATTGTT
chr13	23667067	23667068	chr13:23667068:T:G	rs4454820	T	G	-	Sox2_MA0143.3	21	0	+	0	0	.
chr13	23695559	23695560	chr13:23695560:A:C	rs9580734	A	C	A	Sox2_MA0143.3	-17	0	-	0	0	.
chr13	23723317	23723318	chr13:23723318:G:A	rs61946392	G	A	G	Sox2_MA0143.3	20	0	+	0	0	.
chr13	23807040	23807041	chr13:23807041:A:C	rs77005467	A	C	A	Sox2_MA0143.3	10	0	-	0	0	.
chr13	23841738	23841739	chr13:23841739:T:C	rs9551013	T	C	T	Sox2_MA0143.3	15	0	+	0	0	.
chr13	23899891	23899892	chr13:23899892:C:T	rs9553093	C	T	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr13	23958382	23958383	chr13:23958383:G:A	rs1886796	G	A	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr13	23986693	23986694	chr13:23986694:G:A	rs77971723	G	A	A	Sox2_MA0143.3	9	0	+	0	0	.
chr13	23988810	23988811	chr13:23988811:G:C	rs2810696	G	C	C	Sox2_MA0143.3	13	0	+	0	0	.
chr13	24012443	24012444	chr13:24012444:T:C	rs9510993	T	C	T	Sox2_MA0143.3	26	0	-	0	0	.
chr13	24040258	24040259	chr13:24040259:A:G	rs746798	A	G	A	Sox2_MA0143.3	22	0	-	0	0	.
chr13	24042397	24042398	chr13:24042398:T:C	rs9507225	T	C	T	Sox2_MA0143.3	18	0	+	0	0	.
chr13	24045287	24045288	chr13:24045288:G:A	rs6490860	G	A	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr13	24053268	24053269	chr13:24053269:G:T	rs9511022	G	T	G	Sox2_MA0143.3	16	0	-	0	0	.
chr13	24127178	24127179	chr13:24127179:A:G	rs9553191	A	G	A	Sox2_MA0143.3	6	1	-	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr13	24143005	24143006	chr13:24143006:C:T	rs9553201	C	T	C	Sox2_MA0143.3	17	0	-	0	0	.
chr13	24144610	24144611	chr13:24144611:G:A	rs6490875	G	A	A	Sox2_MA0143.3	-8	0	+	0	0	.
chr13	24146300	24146301	chr13:24146301:C:G	rs7335680	C	G	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr13	24149026	24149027	chr13:24149027:G:A	chr13:24149027:G:A	G	A	G	Sox2_MA0143.3	1	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr13	24149732	24149733	chr13:24149733:G:A	rs7994865	G	A	G	Sox2_MA0143.3	13	0	-	0	0	.
chr13	24149756	24149757	chr13:24149757:C:T	rs113208653	C	T	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr13	24192130	24192131	chr13:24192131:C:G	rs9507266	C	G	G	Sox2_MA0143.3	9	0	+	0	0	.
chr13	24193341	24193342	chr13:24193342:T:C	rs111253824	T	C	T	Sox2_MA0143.3	-7	0	-	0	0	.
chr13	24233621	24233622	chr13:24233622:A:G	rs1220599	A	G	A	Sox2_MA0143.3	-17	0	-	0	0	.
chr13	24276888	24276889	chr13:24276889:A:T	rs8002758	A	T	A	Sox2_MA0143.3	12	0	+	0	0	.
chr13	24292165	24292166	chr13:24292166:A:G	rs17080603	A	G	A	Sox2_MA0143.3	13	0	+	0	0	.
chr13	24357996	24357997	chr13:24357997:A:G	rs56069023	A	G	-	Sox2_MA0143.3	15	0	+	0	0	.
chr13	24496644	24496645	chr13:24496645:G:A	rs9507357	G	A	.	Sox2_MA0143.3	12	0	-	0	0	.
chr13	24515434	24515435	chr13:24515435:A:C	rs9511309	A	C	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr13	24651698	24651699	chr13:24651699:T:C	rs9553395	T	C	T	Sox2_MA0143.3	3	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr13	24675921	24675922	chr13:24675922:G:A	rs11842336	G	A	G	Sox2_MA0143.3	19	0	+	0	0	.
chr13	24798838	24798839	chr13:24798839:A:T	rs7991614	A	T	T	Sox2_MA0143.3	-12	0	-	0	0	.
chr13	24864331	24864332	chr13:24864332:A:G	rs9511481	A	G	A	Sox2_MA0143.3	17	0	-	0	0	.
chr13	25026355	25026356	chr13:25026356:C:T	rs79926283	C	T	.	Sox2_MA0143.3	-9	0	-	0	0	.
chr13	25026356	25026357	chr13:25026357:A:G	rs74040908	A	G	.	Sox2_MA0143.3	-10	0	-	0	0	.
chr13	25114982	25114983	chr13:25114983:A:T	rs2994899	A	T	T	Sox2_MA0143.3	-11	0	-	0	0	.
chr13	25165993	25165994	chr13:25165994:C:G	rs73479448	C	G	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr13	25180557	25180558	chr13:25180558:C:T	rs878205	C	T	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr13	25209848	25209849	chr13:25209849:C:G	rs9507481	C	G	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr13	25358289	25358290	chr13:25358290:C:T	rs58681281	C	T	C	Sox2_MA0143.3	12	0	-	0	0	.
chr13	25432004	25432005	chr13:25432005:T:C	rs4280098	T	C	T	Sox2_MA0143.3	9	0	+	0	0	.
chr13	25544652	25544653	chr13:25544653:G:A	rs9578885	G	A	G	Sox2_MA0143.3	20	0	-	0	0	.
chr13	25973086	25973087	chr13:25973087:A:T	rs9319262	A	T	T	Sox2_MA0143.3	-5	0	+	0	0	.
chr13	25977273	25977274	chr13:25977274:A:T	rs201069460	A	T	A	Sox2_MA0143.3	18	0	-	0	0	.
chr13	25977411	25977412	chr13:25977412:G:A	rs560595769	G	A	G	Sox2_MA0143.3	0	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr13	26017017	26017018	chr13:26017018:T:C	rs4770899	T	C	C	Sox2_MA0143.3	23	0	+	0	0	.
chr13	26037688	26037689	chr13:26037689:G:A	rs9512057	G	A	A	Sox2_MA0143.3	-14	0	+	0	0	.
chr13	26257579	26257580	chr13:26257580:A:G	rs9512166	A	G	G	Sox2_MA0143.3	23	0	+	0	0	.
chr13	26326085	26326086	chr13:26326086:T:G	rs1175724	T	G	G	Sox2_MA0143.3	4	1	+	9.206767037375712	2.2980122580604916	CCTTTGTC
chr13	26501333	26501334	chr13:26501334:G:A	rs772289636	G	A	G	Sox2_MA0143.3	-9	0	+	0	0	.
chr13	26505054	26505055	chr13:26505055:A:T	rs493475	A	T	A	Sox2_MA0143.3	21	0	-	0	0	.
chr13	26509293	26509294	chr13:26509294:T:C	rs2065453	T	C	T	Sox2_MA0143.3	3	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr13	26542248	26542249	chr13:26542249:T:C	rs144996847	T	C	T	Sox2_MA0143.3	2	1	+	9.800647049772198	3.494828071296623	CCTTTGTT
chr13	26561874	26561875	chr13:26561875:G:C	rs73484918	G	C	G	Sox2_MA0143.3	22	0	+	0	0	.
chr13	26600374	26600375	chr13:26600375:G:A	rs74411818	G	A	G	Sox2_MA0143.3	9	0	+	0	0	.
chr13	26818129	26818130	chr13:26818130:A:G	rs9581749	A	G	A	Sox2_MA0143.3	2	1	+	9.019595766176417	2.900948058900136	CCATTGTC
chr13	26847483	26847484	chr13:26847484:A:G	rs7991717	A	G	A	Sox2_MA0143.3	-14	0	-	0	0	.
chr13	26853106	26853107	chr13:26853107:T:C	rs9507807	T	C	C	Sox2_MA0143.3	2	1	-	8.676919043985553	2.5582713367092715	CCATTGTG
chr13	26900028	26900029	chr13:26900029:A:G	rs75211651	A	G	A	Sox2_MA0143.3	9	0	-	0	0	.
chr13	26968119	26968120	chr13:26968120:C:T	rs571705307	C	T	C	Sox2_MA0143.3	0	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr13	26968138	26968139	chr13:26968139:C:A	rs3897233	C	A	A	Sox2_MA0143.3	19	0	+	0	0	.
chr13	26969643	26969644	chr13:26969644:A:G	rs73154075	A	G	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr13	27008936	27008937	chr13:27008937:C:T	rs7337170	C	T	C	Sox2_MA0143.3	22	0	+	0	0	.
chr13	27252730	27252731	chr13:27252731:A:G	rs3094291	A	G	A	Sox2_MA0143.3	3	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr13	27264172	27264173	chr13:27264173:T:C	rs986947987	T	C	T	Sox2_MA0143.3	21	0	-	0	0	.
chr13	27340936	27340937	chr13:27340937:C:T	rs9581833	C	T	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr13	27409229	27409230	chr13:27409230:G:T	rs9652090	G	T	G	Sox2_MA0143.3	1	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr13	27425418	27425419	chr13:27425419:A:G	rs1045059675	A	G	A	Sox2_MA0143.3	25	0	+	0	0	.
chr13	27591095	27591096	chr13:27591096:G:A	rs9512757	G	A	G	Sox2_MA0143.3	20	0	-	0	0	.
chr13	27599856	27599857	chr13:27599857:T:C	rs74624407	T	C	T	Sox2_MA0143.3	13	0	-	0	0	.
chr13	27611252	27611253	chr13:27611253:T:A	rs571354	T	A	A	Sox2_MA0143.3	22	0	-	0	0	.
chr13	27621119	27621120	chr13:27621120:G:A	rs2232665	G	A	G	Sox2_MA0143.3	21	0	-	0	0	.
chr13	27642922	27642923	chr13:27642923:A:C	rs1218952	A	C	A	Sox2_MA0143.3	7	1	-	9.800647049772198	8.864090315184848	CCTTTGTT
chr13	27708816	27708817	chr13:27708817:G:A	rs913093	G	A	G	Sox2_MA0143.3	1	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr13	27728792	27728793	chr13:27728793:G:T	rs9512838	G	T	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr13	27776300	27776301	chr13:27776301:C:T	rs9581910	C	T	C	Sox2_MA0143.3	1	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr13	27803001	27803002	chr13:27803002:A:G	rs927848	A	G	g	Sox2_MA0143.3	17	0	-	0	0	.
chr13	27845982	27845983	chr13:27845983:A:C	rs142892912	A	C	a	Sox2_MA0143.3	-8	0	-	0	0	.
chr13	27902773	27902774	chr13:27902774:G:A	rs11618581	G	A	a	Sox2_MA0143.3	14	0	-	0	0	.
chr13	27918267	27918268	chr13:27918268:G:A	rs61944004	G	A	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr13	27921981	27921982	chr13:27921982:T:C	rs4002828	T	C	C	Sox2_MA0143.3	-12	0	-	0	0	.
chr13	28001013	28001014	chr13:28001014:T:C	rs2481951	T	C	T	Sox2_MA0143.3	-18	0	+	0	0	.
chr13	28031530	28031531	chr13:28031531:T:C	rs74653167	T	C	T	Sox2_MA0143.3	13	0	-	0	0	.
chr13	28036786	28036787	chr13:28036787:G:C	rs2504232	G	C	G	Sox2_MA0143.3	11	0	-	0	0	.
chr13	28463756	28463757	chr13:28463757:C:T	rs76054588	C	T	C	Sox2_MA0143.3	11	0	-	0	0	.
chr13	28531490	28531491	chr13:28531491:G:C	rs192139036	G	C	G	Sox2_MA0143.3	22	0	+	0	0	.
chr13	28561156	28561157	chr13:28561157:A:C	rs1538925	A	C	A	Sox2_MA0143.3	14	0	-	0	0	.
chr13	28563228	28563229	chr13:28563229:C:G	rs9551494	C	G	C	Sox2_MA0143.3	-5	0	-	0	0	.
chr13	28567233	28567234	chr13:28567234:T:A	rs77422021	T	A	T	Sox2_MA0143.3	22	0	+	0	0	.
chr13	28585250	28585251	chr13:28585251:T:C	rs1538920	T	C	T	Sox2_MA0143.3	7	1	-	3.5547341015215945	8.864090315184848	CCTTTGTA
chr13	28585729	28585730	chr13:28585730:C:T	rs151092994	C	T	C	Sox2_MA0143.3	27	0	-	0	0	.
chr13	28778277	28778278	chr13:28778278:T:C	rs947249	T	C	t	Sox2_MA0143.3	-11	0	-	0	0	.
chr13	28794465	28794466	chr13:28794466:C:A	rs78741672	C	A	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr13	28794472	28794473	chr13:28794473:G:A	rs76125167	G	A	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr13	28885594	28885595	chr13:28885595:G:A	rs76498370	G	A	A	Sox2_MA0143.3	-13	0	+	0	0	.
chr13	28963833	28963834	chr13:28963834:C:G	rs118155935	C	G	C	Sox2_MA0143.3	18	0	-	0	0	.
chr13	28963857	28963858	chr13:28963858:A:T	rs595628	A	T	T	Sox2_MA0143.3	-6	0	-	0	0	.
chr13	29490926	29490927	chr13:29490927:C:G	rs7324443	C	G	C	Sox2_MA0143.3	11	0	-	0	0	.
chr13	29510726	29510727	chr13:29510727:C:T	rs61948792	C	T	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr13	29587708	29587709	chr13:29587709:C:G	rs73154453	C	G	C	Sox2_MA0143.3	23	0	-	0	0	.
chr13	29744382	29744383	chr13:29744383:T:C	rs11618461	T	C	T	Sox2_MA0143.3	-15	0	-	0	0	.
chr13	29852215	29852216	chr13:29852216:G:A	rs2388247	G	A	A	Sox2_MA0143.3	-14	0	+	0	0	.
chr13	29854996	29854997	chr13:29854997:T:A	rs278043	T	A	A	Sox2_MA0143.3	-15	0	+	0	0	.
chr13	29868703	29868704	chr13:29868704:C:A	rs35546383	C	A	C	Sox2_MA0143.3	13	0	+	0	0	.
chr13	29875470	29875471	chr13:29875471:G:T	rs1033930	G	T	T	Sox2_MA0143.3	18	0	-	0	0	.
chr13	29909589	29909590	chr13:29909590:A:G	rs74582378	A	G	a	Sox2_MA0143.3	26	0	-	0	0	.
chr13	29917860	29917861	chr13:29917861:C:T	rs4141775	C	T	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr13	29920158	29920159	chr13:29920159:T:C	rs7997649	T	C	C	Sox2_MA0143.3	22	0	-	0	0	.
chr13	29924347	29924348	chr13:29924348:A:G	rs927731	A	G	G	Sox2_MA0143.3	17	0	+	0	0	.
chr13	30004131	30004132	chr13:30004132:C:T	rs35831078	C	T	T	Sox2_MA0143.3	22	0	+	0	0	.
chr13	30047831	30047832	chr13:30047832:C:G	rs1041578	C	G	G	Sox2_MA0143.3	24	0	-	0	0	.
chr13	30079365	30079366	chr13:30079366:G:C	rs489080	G	C	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr13	30110644	30110645	chr13:30110645:C:T	rs78780023	C	T	T	Sox2_MA0143.3	-15	0	+	0	0	.
chr13	30111783	30111784	chr13:30111784:G:A	rs604081	G	A	A	Sox2_MA0143.3	-9	0	-	0	0	.
chr13	30145911	30145912	chr13:30145912:A:T	rs77613014	A	T	A	Sox2_MA0143.3	-17	0	+	0	0	.
chr13	30145931	30145932	chr13:30145932:T:G	rs142678549	T	G	t	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr13	30182691	30182692	chr13:30182692:T:A	rs73163438	T	A	T	Sox2_MA0143.3	-5	0	+	0	0	.
chr13	30301004	30301005	chr13:30301005:C:T	rs7338931	C	T	C	Sox2_MA0143.3	21	0	-	0	0	.
chr13	30324078	30324079	chr13:30324079:T:C	rs202102	T	C	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr13	30388614	30388615	chr13:30388615:A:G	rs2388538	A	G	A	Sox2_MA0143.3	-1	0	+	0	0	.
chr13	30436206	30436207	chr13:30436207:C:G	rs7998275	C	G	C	Sox2_MA0143.3	1	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr13	30465671	30465672	chr13:30465672:C:T	rs1449579772	C	T	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr13	30465672	30465673	chr13:30465673:C:G	rs914748300	C	G	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr13	30560574	30560575	chr13:30560575:G:A	rs1556429	G	A	A	Sox2_MA0143.3	26	0	-	0	0	.
chr13	30560603	30560604	chr13:30560604:G:A	rs7982514	G	A	A	Sox2_MA0143.3	-3	0	-	0	0	.
chr13	30654589	30654590	chr13:30654590:A:T	rs79047998	A	T	A	Sox2_MA0143.3	24	0	-	0	0	.
chr13	30713237	30713238	chr13:30713238:G:A	rs143900424	G	A	G	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr13	30729878	30729879	chr13:30729879:A:G	rs67961424	A	G	A	Sox2_MA0143.3	-1	0	+	0	0	.
chr13	30792143	30792144	chr13:30792144:C:G	rs11842141	C	G	C	Sox2_MA0143.3	0	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr13	30797599	30797600	chr13:30797600:G:A	rs12872037	G	A	G	Sox2_MA0143.3	12	0	-	0	0	.
chr13	30832999	30833000	chr13:30833000:C:A	rs74330588	C	A	C	Sox2_MA0143.3	12	0	+	0	0	.
chr13	30833019	30833020	chr13:30833020:C:T	rs529662856	C	T	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr13	30833362	30833363	chr13:30833363:C:T	rs78501862	C	T	c	Sox2_MA0143.3	17	0	-	0	0	.
chr13	30865311	30865312	chr13:30865312:A:G	rs71436411	A	G	A	Sox2_MA0143.3	21	0	+	0	0	.
chr13	30871752	30871753	chr13:30871753:G:A	rs17599197	G	A	G	Sox2_MA0143.3	11	0	+	0	0	.
chr13	30871754	30871755	chr13:30871755:G:A	rs114938307	G	A	G	Sox2_MA0143.3	13	0	+	0	0	.
chr13	30895527	30895528	chr13:30895528:C:T	rs17534004	C	T	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr13	31050606	31050607	chr13:31050607:A:G	rs17537328	A	G	A	Sox2_MA0143.3	-1	0	+	0	0	.
chr13	31061884	31061885	chr13:31061885:G:C	chr13:31061885:G:C	G	C	G	Sox2_MA0143.3	-3	0	-	0	0	.
chr13	31125350	31125351	chr13:31125351:G:T	rs61948636	G	T	G	Sox2_MA0143.3	11	0	-	0	0	.
chr13	31172684	31172685	chr13:31172685:C:A	chr13:31172685:C:A	C	A	C	Sox2_MA0143.3	24	0	+	0	0	.
chr13	31192534	31192535	chr13:31192535:T:C	rs4941785	T	C	T	Sox2_MA0143.3	27	0	-	0	0	.
chr13	31380923	31380924	chr13:31380924:T:A	rs9546525	T	A	a	Sox2_MA0143.3	13	0	-	0	0	.
chr13	31380925	31380926	chr13:31380926:C:G	rs148073770	C	G	c	Sox2_MA0143.3	11	0	-	0	0	.
chr13	31381443	31381444	chr13:31381444:T:C	rs2872422	T	C	c	Sox2_MA0143.3	18	0	+	0	0	.
chr13	31485251	31485252	chr13:31485252:C:T	chr13:31485252:C:T	C	T	C	Sox2_MA0143.3	26	0	+	0	0	.
chr13	31876753	31876754	chr13:31876754:G:A	rs350	G	A	A	Sox2_MA0143.3	-9	0	+	0	0	.
chr13	31891058	31891059	chr13:31891059:C:A	rs77378140	C	A	C	Sox2_MA0143.3	13	0	+	0	0	.
chr13	32315141	32315142	chr13:32315142:T:A	chr13:32315142:T:A	T	A	T	Sox2_MA0143.3	16	0	-	0	0	.
chr13	32385396	32385397	chr13:32385397:A:G	rs542551	A	G	A	Sox2_MA0143.3	-15	0	+	0	0	.
chr13	32428569	32428570	chr13:32428570:C:T	rs77988625	C	T	C	Sox2_MA0143.3	27	0	+	0	0	.
chr13	32491305	32491306	chr13:32491306:T:G	rs9595630	T	G	T	Sox2_MA0143.3	-9	0	-	0	0	.
chr13	32589260	32589261	chr13:32589261:A:G	rs1355261750	A	G	A	Sox2_MA0143.3	-10	0	+	0	0	.
chr13	32639064	32639065	chr13:32639065:C:T	rs76846343	C	T	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr13	32663943	32663944	chr13:32663944:T:C	rs9591230	T	C	C	Sox2_MA0143.3	24	0	+	0	0	.
chr13	32721801	32721802	chr13:32721802:A:G	rs13378700	A	G	G	Sox2_MA0143.3	-3	0	-	0	0	.
chr13	32878515	32878516	chr13:32878516:A:G	rs7328932	A	G	A	Sox2_MA0143.3	-3	0	-	0	0	.
chr13	32894872	32894873	chr13:32894873:T:A	rs6561628	T	A	A	Sox2_MA0143.3	2	1	-	8.676919043985553	8.864090315184848	CCATTGTG
chr13	32939883	32939884	chr13:32939884:G:A	rs4943019	G	A	A	Sox2_MA0143.3	-2	0	+	0	0	.
chr13	33006944	33006945	chr13:33006945:G:A	rs74317369	G	A	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr13	33057219	33057220	chr13:33057220:A:G	rs990360154	A	G	A	Sox2_MA0143.3	7	1	+	3.5547341015215945	8.864090315184848	CCTTTGTA
chr13	33072390	33072391	chr13:33072391:G:T	rs111755518	G	T	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr13	33167790	33167791	chr13:33167791:G:A	rs2296393	G	A	G	Sox2_MA0143.3	13	0	-	0	0	.
chr13	33167820	33167821	chr13:33167821:G:A	rs2296392	G	A	A	Sox2_MA0143.3	-17	0	-	0	0	.
chr13	33167880	33167881	chr13:33167881:T:C	rs2296390	T	C	T	Sox2_MA0143.3	12	0	-	0	0	.
chr13	33308031	33308032	chr13:33308032:A:G	rs982668687	A	G	A	Sox2_MA0143.3	8	0	-	0	0	.
chr13	33358984	33358985	chr13:33358985:A:G	rs151332680	A	G	A	Sox2_MA0143.3	11	0	+	0	0	.
chr13	33363032	33363033	chr13:33363033:C:A	rs17719530	C	A	C	Sox2_MA0143.3	0	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr13	33641039	33641040	chr13:33641040:T:C	rs77839862	T	C	T	Sox2_MA0143.3	25	0	-	0	0	.
chr13	33675237	33675238	chr13:33675238:G:C	rs6562005	G	C	G	Sox2_MA0143.3	7	1	-	9.206767037375712	8.864090315184848	CCTTTGTC
chr13	33725095	33725096	chr13:33725096:A:G	rs6562039	A	G	A	Sox2_MA0143.3	9	0	+	0	0	.
chr13	33725558	33725559	chr13:33725559:C:T	rs74806419	C	T	C	Sox2_MA0143.3	7	1	-	8.864090315184848	3.5547341015215945	CCTTTGTG
chr13	33725579	33725580	chr13:33725580:G:A	rs79409528	G	A	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr13	33730311	33730312	chr13:33730312:A:C	rs9538478	A	C	A	Sox2_MA0143.3	6	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr13	33738467	33738468	chr13:33738468:A:G	rs9538504	A	G	G	Sox2_MA0143.3	6	1	-	9.613475778572903	2.7047209992576837	CCATTGTT
chr13	33846403	33846404	chr13:33846404:G:A	rs79497045	G	A	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr13	33927791	33927792	chr13:33927792:C:T	chr13:33927792:C:T	C	T	C	Sox2_MA0143.3	16	0	-	0	0	.
chr13	33937964	33937965	chr13:33937965:A:G	rs987976694	A	G	a	Sox2_MA0143.3	-5	0	+	0	0	.
chr13	34029026	34029027	chr13:34029027:G:C	rs1887832	G	C	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr13	34153770	34153771	chr13:34153771:G:A	rs9539875	G	A	A	Sox2_MA0143.3	19	0	-	0	0	.
chr13	34408434	34408435	chr13:34408435:C:A	chr13:34408435:C:A	C	A	C	Sox2_MA0143.3	1	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr13	34469522	34469523	chr13:34469523:T:C	rs17081337	T	C	T	Sox2_MA0143.3	10	0	+	0	0	.
chr13	34506744	34506745	chr13:34506745:C:A	rs73475884	C	A	C	Sox2_MA0143.3	0	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr13	34553845	34553846	chr13:34553846:C:T	rs1410950	C	T	C	Sox2_MA0143.3	15	0	+	0	0	.
chr13	34555769	34555770	chr13:34555770:C:A	rs1980911	C	A	A	Sox2_MA0143.3	5	1	-	9.613475778572903	2.7047209992576837	CCATTGTT
chr13	34701440	34701441	chr13:34701441:C:T	rs12018953	C	T	T	Sox2_MA0143.3	-16	0	-	0	0	.
chr13	34779527	34779528	chr13:34779528:C:A	rs968665	C	A	A	Sox2_MA0143.3	-15	0	-	0	0	.
chr13	34816479	34816480	chr13:34816480:T:C	rs1323951	T	C	T	Sox2_MA0143.3	-18	0	-	0	0	.
chr13	34827324	34827325	chr13:34827325:T:G	rs9599701	T	G	t	Sox2_MA0143.3	20	0	-	0	0	.
chr13	34931740	34931741	chr13:34931741:C:A	rs73488109	C	A	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr13	35470791	35470792	chr13:35470792:C:T	chr13:35470792:C:T	C	T	C	Sox2_MA0143.3	14	0	-	0	0	.
chr13	35573331	35573332	chr13:35573332:A:G	rs10507424	A	G	A	Sox2_MA0143.3	-12	0	-	0	0	.
chr13	35708304	35708305	chr13:35708305:G:A	rs56665961	G	A	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr13	35709715	35709716	chr13:35709716:G:A	rs2147673	G	A	G	Sox2_MA0143.3	15	0	+	0	0	.
chr13	35731922	35731923	chr13:35731923:T:C	rs9574453	T	C	T	Sox2_MA0143.3	9	0	-	0	0	.
chr13	35838719	35838720	chr13:35838720:T:C	rs80200573	T	C	T	Sox2_MA0143.3	-16	0	+	0	0	.
chr13	35947750	35947751	chr13:35947751:G:T	rs9545871	G	T	T	Sox2_MA0143.3	20	0	+	0	0	.
chr13	35995536	35995537	chr13:35995537:A:G	rs17185689	A	G	A	Sox2_MA0143.3	21	0	+	0	0	.
chr13	36147769	36147770	chr13:36147770:A:G	rs10781722	A	G	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr13	36162580	36162581	chr13:36162581:G:A	rs7322211	G	A	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr13	36255824	36255825	chr13:36255825:C:T	rs748985	C	T	C	Sox2_MA0143.3	20	0	+	0	0	.
chr13	36430578	36430579	chr13:36430579:G:C	rs3814805	G	C	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr13	36778380	36778381	chr13:36778381:A:G	rs11616636	A	G	g	Sox2_MA0143.3	-2	0	-	0	0	.
chr13	36839406	36839407	chr13:36839407:A:C	rs7982338	A	C	A	Sox2_MA0143.3	-5	0	+	0	0	.
chr13	36839419	36839420	chr13:36839420:C:T	rs7981675	C	T	C	Sox2_MA0143.3	8	0	+	0	0	.
chr13	36883152	36883153	chr13:36883153:T:C	rs9566168	T	C	T	Sox2_MA0143.3	3	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr13	36945518	36945519	chr13:36945519:C:A	rs75691554	C	A	C	Sox2_MA0143.3	22	0	+	0	0	.
chr13	37196741	37196742	chr13:37196742:A:G	rs9547741	A	G	.	Sox2_MA0143.3	-14	0	+	0	0	.
chr13	37307190	37307191	chr13:37307191:T:G	rs9547785	T	G	G	Sox2_MA0143.3	-2	0	+	0	0	.
chr13	37307235	37307236	chr13:37307236:T:C	chr13:37307236:T:C	T	C	T	Sox2_MA0143.3	-12	0	+	0	0	.
chr13	37526625	37526626	chr13:37526626:G:A	rs12429236	G	A	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr13	37526669	37526670	chr13:37526670:T:C	rs17255466	T	C	T	Sox2_MA0143.3	24	0	+	0	0	.
chr13	37545000	37545001	chr13:37545001:C:G	rs540978663	C	G	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr13	37657346	37657347	chr13:37657347:T:C	rs138763558	T	C	T	Sox2_MA0143.3	16	0	-	0	0	.
chr13	37681861	37681862	chr13:37681862:C:A	rs1470065615	C	A	C	Sox2_MA0143.3	9	0	-	0	0	.
chr13	37681890	37681891	chr13:37681891:A:G	rs149562802	A	G	A	Sox2_MA0143.3	-20	0	-	0	0	.
chr13	37937182	37937183	chr13:37937183:A:G	rs1337603	A	G	A	Sox2_MA0143.3	-6	0	+	0	0	.
chr13	37974129	37974130	chr13:37974130:G:A	rs9603292	G	A	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr13	38008856	38008857	chr13:38008857:C:G	rs113982010	C	G	C	Sox2_MA0143.3	11	0	+	0	0	.
chr13	38014164	38014165	chr13:38014165:G:A	rs2323668	G	A	A	Sox2_MA0143.3	-4	0	+	0	0	.
chr13	38602472	38602473	chr13:38602473:C:T	rs17058288	C	T	T	Sox2_MA0143.3	-1	0	+	0	0	.
chr13	38763924	38763925	chr13:38763925:A:G	rs9532275	A	G	A	Sox2_MA0143.3	6	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr13	38803699	38803700	chr13:38803700:T:C	rs3884530	T	C	T	Sox2_MA0143.3	26	0	+	0	0	.
chr13	38822003	38822004	chr13:38822004:T:C	chr13:38822004:T:C	T	C	T	Sox2_MA0143.3	-20	0	+	0	0	.
chr13	38822250	38822251	chr13:38822251:G:A	rs544185297	G	A	G	Sox2_MA0143.3	17	0	-	0	0	.
chr13	38868568	38868569	chr13:38868569:G:A	rs4943613	G	A	A	Sox2_MA0143.3	-11	0	+	0	0	.
chr13	38947029	38947030	chr13:38947030:T:C	rs11839336	T	C	c	Sox2_MA0143.3	6	1	+	9.019595766176417	2.110840986861197	CCATTGTC
chr13	38990923	38990924	chr13:38990924:C:A	rs9576674	C	A	c	Sox2_MA0143.3	-19	0	+	0	0	.
chr13	39036485	39036486	chr13:39036486:C:A	rs560257369	C	A	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr13	39103201	39103202	chr13:39103202:C:T	rs1853971	C	T	T	Sox2_MA0143.3	18	0	+	0	0	.
chr13	39129323	39129324	chr13:39129324:G:A	rs7984252	G	A	A	Sox2_MA0143.3	16	0	-	0	0	.
chr13	39263428	39263429	chr13:39263429:T:C	rs1930813	T	C	C	Sox2_MA0143.3	11	0	+	0	0	.
chr13	39307413	39307414	chr13:39307414:G:A	rs987847	G	A	A	Sox2_MA0143.3	23	0	+	0	0	.
chr13	39350732	39350733	chr13:39350733:G:A	rs147354360	G	A	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr13	39392205	39392206	chr13:39392206:T:C	rs9576784	T	C	T	Sox2_MA0143.3	-11	0	-	0	0	.
chr13	39527191	39527192	chr13:39527192:A:T	rs1885763	A	T	A	Sox2_MA0143.3	19	0	+	0	0	.
chr13	39542655	39542656	chr13:39542656:C:G	rs73466823	C	G	C	Sox2_MA0143.3	17	0	+	0	0	.
chr13	39552390	39552391	chr13:39552391:T:A	rs978135	T	A	A	Sox2_MA0143.3	-4	0	+	0	0	.
chr13	39655790	39655791	chr13:39655791:A:G	rs149055210	A	G	A	Sox2_MA0143.3	3	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr13	39693008	39693009	chr13:39693009:T:C	rs9576887	T	C	T	Sox2_MA0143.3	-13	0	+	0	0	.
chr13	39786616	39786617	chr13:39786617:A:C	rs4303351	A	C	C	Sox2_MA0143.3	2	1	-	3.5547341015215945	-2.751084876953981	CCTTTGTA
chr13	39820875	39820876	chr13:39820876:G:C	rs12865501	G	C	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr13	39900689	39900690	chr13:39900690:T:C	rs753676	T	C	T	Sox2_MA0143.3	18	0	+	0	0	.
chr13	39908872	39908873	chr13:39908873:A:G	chr13:39908873:A:G	A	G	A	Sox2_MA0143.3	4	1	-	3.5547341015215945	-3.3540206777936254	CCTTTGTA
chr13	39969355	39969356	chr13:39969356:T:C	rs9549021	T	C	T	Sox2_MA0143.3	24	0	-	0	0	.
chr13	40030464	40030465	chr13:40030465:T:C	rs277270	T	C	T	Sox2_MA0143.3	-15	0	+	0	0	.
chr13	40074497	40074498	chr13:40074498:T:G	rs116106913	T	G	T	Sox2_MA0143.3	6	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr13	40082384	40082385	chr13:40082385:T:C	rs9315753	T	C	t	Sox2_MA0143.3	-10	0	-	0	0	.
chr13	40116256	40116257	chr13:40116257:A:C	rs1000762213	A	C	A	Sox2_MA0143.3	13	0	-	0	0	.
chr13	40132853	40132854	chr13:40132854:C:T	rs12872985	C	T	T	Sox2_MA0143.3	-12	0	-	0	0	.
chr13	40191757	40191758	chr13:40191758:C:T	rs79389713	C	T	C	Sox2_MA0143.3	25	0	+	0	0	.
chr13	40213664	40213665	chr13:40213665:C:T	rs77507114	C	T	C	Sox2_MA0143.3	21	0	+	0	0	.
chr13	40223920	40223921	chr13:40223921:G:A	rs9315764	G	A	G	Sox2_MA0143.3	26	0	+	0	0	.
chr13	40251602	40251603	chr13:40251603:A:G	rs73185561	A	G	A	Sox2_MA0143.3	4	1	-	9.800647049772198	2.8918922704569785	CCTTTGTT
chr13	40292059	40292060	chr13:40292060:T:C	rs11616421	T	C	T	Sox2_MA0143.3	21	0	-	0	0	.
chr13	40293827	40293828	chr13:40293828:A:G	rs4444213	A	G	A	Sox2_MA0143.3	26	0	-	0	0	.
chr13	40342288	40342289	chr13:40342289:G:A	rs141786792	G	A	A	Sox2_MA0143.3	-1	0	-	0	0	.
chr13	40353488	40353489	chr13:40353489:A:T	rs118009130	A	T	A	Sox2_MA0143.3	8	0	+	0	0	.
chr13	40445694	40445695	chr13:40445695:C:T	rs4943782	C	T	C	Sox2_MA0143.3	10	0	+	0	0	.
chr13	40453707	40453708	chr13:40453708:T:A	rs7324749	T	A	T	Sox2_MA0143.3	-10	0	+	0	0	.
chr13	40470165	40470166	chr13:40470166:T:C	rs2755223	T	C	T	Sox2_MA0143.3	13	0	+	0	0	.
chr13	40586073	40586074	chr13:40586074:G:A	rs17811138	G	A	G	Sox2_MA0143.3	1	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr13	40771065	40771066	chr13:40771066:G:A	rs1017191960	G	A	.	Sox2_MA0143.3	19	0	-	0	0	.
chr13	40874858	40874859	chr13:40874859:C:G	rs9594445	C	G	G	Sox2_MA0143.3	17	0	+	0	0	.
chr13	40986566	40986567	chr13:40986567:T:C	rs10507488	T	C	T	Sox2_MA0143.3	3	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr13	41019725	41019726	chr13:41019726:G:A	rs542513951	G	A	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr13	41216046	41216047	chr13:41216047:T:C	rs148528835	T	C	T	Sox2_MA0143.3	-18	0	+	0	0	.
chr13	41350655	41350656	chr13:41350656:C:T	rs60085073	C	T	C	Sox2_MA0143.3	24	0	-	0	0	.
chr13	41352716	41352717	chr13:41352717:C:T	rs8000452	C	T	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr13	41361703	41361704	chr13:41361704:C:T	rs4942042	C	T	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr13	41503637	41503638	chr13:41503638:T:G	rs1179957	T	G	G	Sox2_MA0143.3	-12	0	+	0	0	.
chr13	41564028	41564029	chr13:41564029:C:T	rs12867333	C	T	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr13	41651555	41651556	chr13:41651556:T:C	rs9594604	T	C	T	Sox2_MA0143.3	3	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr13	41767950	41767951	chr13:41767951:C:T	rs73183372	C	T	C	Sox2_MA0143.3	13	0	-	0	0	.
chr13	41775345	41775346	chr13:41775346:T:C	rs7999970	T	C	T	Sox2_MA0143.3	-16	0	+	0	0	.
chr13	41782259	41782260	chr13:41782260:T:C	rs78891511	T	C	T	Sox2_MA0143.3	-3	0	-	0	0	.
chr13	42022881	42022882	chr13:42022882:T:C	rs7332210	T	C	T	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr13	42022918	42022919	chr13:42022919:T:C	rs7332244	T	C	C	Sox2_MA0143.3	2	1	+	9.800647049772198	3.494828071296623	CCTTTGTT
chr13	42073910	42073911	chr13:42073911:T:G	rs2166622	T	G	G	Sox2_MA0143.3	18	0	-	0	0	.
chr13	42152607	42152608	chr13:42152608:A:C	rs9533017	A	C	C	Sox2_MA0143.3	13	0	+	0	0	.
chr13	42152837	42152838	chr13:42152838:C:T	rs9590671	C	T	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr13	42267168	42267169	chr13:42267169:C:G	rs912098	C	G	C	Sox2_MA0143.3	22	0	+	0	0	.
chr13	42277363	42277364	chr13:42277364:A:G	rs140170565	A	G	A	Sox2_MA0143.3	3	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr13	42283829	42283830	chr13:42283830:G:A	rs375087646	G	A	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr13	42720655	42720656	chr13:42720656:G:A	rs2296115	G	A	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr13	42947901	42947902	chr13:42947902:G:A	rs12427475	G	A	G	Sox2_MA0143.3	-14	0	+	0	0	.
chr13	43026091	43026092	chr13:43026092:G:A	rs57870706	G	A	A	Sox2_MA0143.3	-12	0	+	0	0	.
chr13	43026105	43026106	chr13:43026106:A:G	rs74060453	A	G	A	Sox2_MA0143.3	2	1	+	9.613475778572903	3.494828071296623	CCATTGTT
chr13	43054996	43054997	chr13:43054997:C:A	rs73473966	C	A	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr13	43122795	43122796	chr13:43122796:T:C	rs150836310	T	C	T	Sox2_MA0143.3	20	0	+	0	0	.
chr13	43127028	43127029	chr13:43127029:C:T	rs2762199	C	T	T	Sox2_MA0143.3	-1	0	+	0	0	.
chr13	43159320	43159321	chr13:43159321:C:T	rs7337103	C	T	g	Sox2_MA0143.3	-8	0	-	0	0	.
chr13	43186603	43186604	chr13:43186604:C:A	rs6561108	C	A	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr13	43192444	43192445	chr13:43192445:C:T	rs9533421	C	T	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr13	43213894	43213895	chr13:43213895:C:T	rs1044753	C	T	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr13	43213899	43213900	chr13:43213900:T:G	rs703206	T	G	T	Sox2_MA0143.3	-9	0	-	0	0	.
chr13	43270370	43270371	chr13:43270371:C:T	rs748851823	C	T	C	Sox2_MA0143.3	5	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr13	43389873	43389874	chr13:43389874:T:G	chr13:43389874:T:G	T	G	T	Sox2_MA0143.3	-4	0	-	0	0	.
chr13	43441443	43441444	chr13:43441444:A:G	rs13378681	A	G	A	Sox2_MA0143.3	25	0	-	0	0	.
chr13	43488502	43488503	chr13:43488503:C:A	rs115017037	C	A	C	Sox2_MA0143.3	8	0	-	0	0	.
chr13	43488522	43488523	chr13:43488523:G:A	rs4942233	G	A	A	Sox2_MA0143.3	-12	0	-	0	0	.
chr13	43597316	43597317	chr13:43597317:C:T	rs17460665	C	T	C	Sox2_MA0143.3	24	0	-	0	0	.
chr13	43597358	43597359	chr13:43597359:A:G	rs9594979	A	G	A	Sox2_MA0143.3	-18	0	-	0	0	.
chr13	43671267	43671268	chr13:43671268:C:A	rs61335261	C	A	C	Sox2_MA0143.3	23	0	+	0	0	.
chr13	43766546	43766547	chr13:43766547:T:C	rs9525839	T	C	T	Sox2_MA0143.3	-16	0	-	0	0	.
chr13	43915537	43915538	chr13:43915538:G:T	rs11147932	G	T	G	Sox2_MA0143.3	5	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr13	43948046	43948047	chr13:43948047:A:G	rs1596758	A	G	G	Sox2_MA0143.3	-11	0	+	0	0	.
chr13	44014180	44014181	chr13:44014181:C:T	rs78506915	C	T	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr13	44025148	44025149	chr13:44025149:G:A	rs7322803	G	A	G	Sox2_MA0143.3	5	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr13	44025158	44025159	chr13:44025159:T:A	rs7323862	T	A	A	Sox2_MA0143.3	15	0	+	0	0	.
chr13	44079354	44079355	chr13:44079355:A:G	rs75485200	A	G	A	Sox2_MA0143.3	24	0	-	0	0	.
chr13	44105097	44105098	chr13:44105098:A:G	rs9525913	A	G	A	Sox2_MA0143.3	4	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr13	44198078	44198079	chr13:44198079:C:T	rs75191728	C	T	C	Sox2_MA0143.3	7	1	-	8.864090315184848	3.5547341015215945	CCTTTGTG
chr13	44213234	44213235	chr13:44213235:C:T	rs2244519	C	T	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr13	44224829	44224830	chr13:44224830:A:G	rs566843399	A	G	A	Sox2_MA0143.3	25	0	-	0	0	.
chr13	44232494	44232495	chr13:44232495:G:A	rs7998447	G	A	G	Sox2_MA0143.3	8	0	-	0	0	.
chr13	44390586	44390587	chr13:44390587:C:T	rs2281848	C	T	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr13	44404030	44404031	chr13:44404031:C:A	rs9525954	C	A	A	Sox2_MA0143.3	9	0	+	0	0	.
chr13	44429021	44429022	chr13:44429022:A:C	rs73463677	A	C	A	Sox2_MA0143.3	19	0	-	0	0	.
chr13	44471924	44471925	chr13:44471925:G:A	rs560072608	G	A	G	Sox2_MA0143.3	13	0	+	0	0	.
chr13	44661003	44661004	chr13:44661004:C:T	rs10219924	C	T	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr13	44698929	44698930	chr13:44698930:A:G	rs74456995	A	G	A	Sox2_MA0143.3	20	0	+	0	0	.
chr13	44745407	44745408	chr13:44745408:G:A	rs1339589620	G	A	G	Sox2_MA0143.3	-2	0	+	0	0	.
chr13	44768814	44768815	chr13:44768815:A:G	rs1337672	A	G	G	Sox2_MA0143.3	3	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr13	44813064	44813065	chr13:44813065:C:T	rs2786708	C	T	T	Sox2_MA0143.3	24	0	+	0	0	.
chr13	44842053	44842054	chr13:44842054:C:T	rs116194518	C	T	c	Sox2_MA0143.3	-9	0	+	0	0	.
chr13	44857868	44857869	chr13:44857869:T:C	rs9567489	T	C	T	Sox2_MA0143.3	2	1	-	9.019595766176417	2.900948058900136	CCATTGTC
chr13	44879489	44879490	chr13:44879490:T:C	rs10492744	T	C	C	Sox2_MA0143.3	20	0	+	0	0	.
chr13	44879766	44879767	chr13:44879767:G:T	chr13:44879767:G:T	G	T	G	Sox2_MA0143.3	10	0	+	0	0	.
chr13	44897553	44897554	chr13:44897554:G:A	rs9534002	G	A	G	Sox2_MA0143.3	19	0	-	0	0	.
chr13	44921639	44921640	chr13:44921640:G:A	rs34242390	G	A	G	Sox2_MA0143.3	-3	0	+	0	0	.
chr13	45056729	45056730	chr13:45056730:G:A	rs77567520	G	A	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr13	45193922	45193923	chr13:45193923:G:A	rs533478138	G	A	G	Sox2_MA0143.3	1	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr13	45206735	45206736	chr13:45206736:A:T	rs17066516	A	T	A	Sox2_MA0143.3	19	0	+	0	0	.
chr13	45311877	45311878	chr13:45311878:A:C	chr13:45311878:A:C	A	C	a	Sox2_MA0143.3	2	1	-	9.206767037375712	2.900948058900136	CCTTTGTC
chr13	45332368	45332369	chr13:45332369:T:C	rs78321034	T	C	T	Sox2_MA0143.3	-16	0	+	0	0	.
chr13	45441832	45441833	chr13:45441833:C:T	rs184634332	C	T	.	Sox2_MA0143.3	16	0	-	0	0	.
chr13	45441856	45441857	chr13:45441857:G:A	rs75045891	G	A	.	Sox2_MA0143.3	-8	0	-	0	0	.
chr13	45441859	45441860	chr13:45441860:T:G	rs116020254	T	G	.	Sox2_MA0143.3	-11	0	-	0	0	.
chr13	45500932	45500933	chr13:45500933:C:T	rs116852124	C	T	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr13	45500951	45500952	chr13:45500952:C:G	chr13:45500952:C:G	C	G	C	Sox2_MA0143.3	17	0	+	0	0	.
chr13	45705456	45705457	chr13:45705457:G:A	rs766880880	G	A	G	Sox2_MA0143.3	15	0	+	0	0	.
chr13	45792238	45792239	chr13:45792239:C:T	rs76418596	C	T	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr13	45796296	45796297	chr13:45796297:A:T	rs9595382	A	T	A	Sox2_MA0143.3	2	1	+	9.019595766176417	9.206767037375712	CCATTGTC
chr13	45919098	45919099	chr13:45919099:G:C	rs2806906	G	C	C	Sox2_MA0143.3	19	0	+	0	0	.
chr13	45941469	45941470	chr13:45941470:T:C	rs2075427	T	C	T	Sox2_MA0143.3	17	0	-	0	0	.
chr13	46160552	46160553	chr13:46160553:T:C	rs79012506	T	C	T	Sox2_MA0143.3	-17	0	-	0	0	.
chr13	46230288	46230289	chr13:46230289:C:A	rs605811	C	A	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr13	46259400	46259401	chr13:46259401:G:A	rs958545	G	A	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr13	46367835	46367836	chr13:46367836:T:C	rs117404938	T	C	T	Sox2_MA0143.3	23	0	+	0	0	.
chr13	46390086	46390087	chr13:46390087:G:A	rs1380713098	G	A	G	Sox2_MA0143.3	-3	0	+	0	0	.
chr13	46467883	46467884	chr13:46467884:A:G	rs12372825	A	G	N	Sox2_MA0143.3	-20	0	+	0	0	.
chr13	46469175	46469176	chr13:46469176:G:C	rs12430984	G	C	g	Sox2_MA0143.3	13	0	+	0	0	.
chr13	46517022	46517023	chr13:46517023:C:T	rs113473164	C	T	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr13	46664581	46664582	chr13:46664582:C:A	rs9590974	C	A	C	Sox2_MA0143.3	15	0	-	0	0	.
chr13	46667153	46667154	chr13:46667154:C:T	rs7986508	C	T	C	Sox2_MA0143.3	7	1	-	8.676919043985553	3.3675628303222993	CCATTGTG
chr13	46672599	46672600	chr13:46672600:C:T	rs115111549	C	T	C	Sox2_MA0143.3	22	0	+	0	0	.
chr13	46748611	46748612	chr13:46748612:C:T	rs7990115	C	T	C	Sox2_MA0143.3	0	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr13	46753428	46753429	chr13:46753429:G:A	rs150032669	G	A	G	Sox2_MA0143.3	14	0	-	0	0	.
chr13	46900070	46900071	chr13:46900071:G:A	rs73175539	G	A	G	Sox2_MA0143.3	10	0	+	0	0	.
chr13	47038340	47038341	chr13:47038341:G:A	rs139765309	G	A	g	Sox2_MA0143.3	19	0	-	0	0	.
chr13	47111608	47111609	chr13:47111609:A:G	rs186987688	A	G	A	Sox2_MA0143.3	-13	0	-	0	0	.
chr13	47175700	47175701	chr13:47175701:T:G	rs61951579	T	G	T	Sox2_MA0143.3	7	1	-	3.5547341015215945	9.206767037375712	CCTTTGTA
chr13	47338380	47338381	chr13:47338381:A:G	rs9534600	A	G	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr13	47419534	47419535	chr13:47419535:A:G	rs73180365	A	G	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr13	47433682	47433683	chr13:47433683:C:T	rs9595687	C	T	c	Sox2_MA0143.3	-12	0	+	0	0	.
chr13	47548473	47548474	chr13:47548474:T:G	rs79175523	T	G	T	Sox2_MA0143.3	13	0	+	0	0	.
chr13	47651315	47651316	chr13:47651316:C:A	rs1326479	C	A	C	Sox2_MA0143.3	5	1	-	9.613475778572903	2.7047209992576837	CCATTGTT
chr13	47697325	47697326	chr13:47697326:T:A	rs7324902	T	A	A	Sox2_MA0143.3	-17	0	-	0	0	.
chr13	47707604	47707605	chr13:47707605:G:C	rs9534755	G	C	C	Sox2_MA0143.3	19	0	-	0	0	.
chr13	47726279	47726280	chr13:47726280:T:C	rs17337616	T	C	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr13	47846082	47846083	chr13:47846083:A:G	rs9567933	A	G	G	Sox2_MA0143.3	7	1	-	9.800647049772198	9.206767037375712	CCTTTGTT
chr13	47904155	47904156	chr13:47904156:A:G	rs9595806	A	G	A	Sox2_MA0143.3	3	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr13	47904165	47904166	chr13:47904166:G:A	rs73187730	G	A	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr13	47933556	47933557	chr13:47933557:T:C	rs76215289	T	C	T	Sox2_MA0143.3	22	0	-	0	0	.
chr13	48038932	48038933	chr13:48038933:C:T	rs9567983	C	T	C	Sox2_MA0143.3	26	0	+	0	0	.
chr13	48092001	48092002	chr13:48092002:C:T	rs7990099	C	T	T	Sox2_MA0143.3	7	1	-	8.676919043985553	3.3675628303222993	CCATTGTG
chr13	48112944	48112945	chr13:48112945:A:G	rs9568000	A	G	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr13	48112949	48112950	chr13:48112950:G:C	rs79206356	G	C	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr13	48233639	48233640	chr13:48233640:T:A	rs190973047	T	A	T	Sox2_MA0143.3	-1	0	+	0	0	.
chr13	48235835	48235836	chr13:48235836:A:T	rs778360093	A	T	A	Sox2_MA0143.3	-18	0	+	0	0	.
chr13	48235876	48235877	chr13:48235877:T:G	rs117938735	T	G	T	Sox2_MA0143.3	23	0	+	0	0	.
chr13	48633345	48633346	chr13:48633346:G:A	rs1326697	G	A	G	Sox2_MA0143.3	-12	0	+	0	0	.
chr13	48737312	48737313	chr13:48737313:G:A	rs9526493	G	A	A	Sox2_MA0143.3	11	0	+	0	0	.
chr13	48816889	48816890	chr13:48816890:G:C	rs564394519	G	C	G	Sox2_MA0143.3	13	0	-	0	0	.
chr13	48885403	48885404	chr13:48885404:C:T	rs1834735	C	T	C	Sox2_MA0143.3	24	0	+	0	0	.
chr13	48965975	48965976	chr13:48965976:C:T	rs144558472	C	T	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr13	49024052	49024053	chr13:49024053:G:A	rs4942798	G	A	G	Sox2_MA0143.3	21	0	-	0	0	.
chr13	49110687	49110688	chr13:49110688:G:A	rs147331793	G	A	G	Sox2_MA0143.3	7	1	+	8.676919043985553	3.3675628303222993	CCATTGTG
chr13	49308768	49308769	chr13:49308769:C:A	rs193260175	C	A	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr13	49308776	49308777	chr13:49308777:G:A	rs41284774	G	A	G	Sox2_MA0143.3	5	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr13	49497137	49497138	chr13:49497138:T:C	rs1002138503	T	C	T	Sox2_MA0143.3	-18	0	-	0	0	.
chr13	49528235	49528236	chr13:49528236:T:A	rs9535254	T	A	T	Sox2_MA0143.3	7	1	-	3.5547341015215945	9.800647049772198	CCTTTGTA
chr13	49540844	49540845	chr13:49540845:T:A	rs2296502	T	A	T	Sox2_MA0143.3	-11	0	-	0	0	.
chr13	49552245	49552246	chr13:49552246:G:A	rs2274278	G	A	A	Sox2_MA0143.3	13	0	+	0	0	.
chr13	49560557	49560558	chr13:49560558:T:C	rs9535262	T	C	C	Sox2_MA0143.3	-12	0	-	0	0	.
chr13	49594828	49594829	chr13:49594829:C:T	rs4942851	C	T	C	Sox2_MA0143.3	22	0	-	0	0	.
chr13	49791462	49791463	chr13:49791463:T:A	rs77369521	T	A	T	Sox2_MA0143.3	21	0	-	0	0	.
chr13	49836887	49836888	chr13:49836888:G:T	rs529818559	G	T	G	Sox2_MA0143.3	22	0	+	0	0	.
chr13	49848267	49848268	chr13:49848268:T:C	rs9526608	T	C	C	Sox2_MA0143.3	14	0	-	0	0	.
chr13	49858810	49858811	chr13:49858811:C:T	rs927483	C	T	T	Sox2_MA0143.3	-2	0	+	0	0	.
chr13	49998198	49998199	chr13:49998199:C:T	rs1001758007	C	T	C	Sox2_MA0143.3	14	0	-	0	0	.
chr13	49998216	49998217	chr13:49998217:C:A	rs143486270	C	A	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr13	50030480	50030481	chr13:50030481:A:T	rs2740536	A	T	T	Sox2_MA0143.3	7	1	-	9.613475778572903	3.3675628303222993	CCATTGTT
chr13	50116609	50116610	chr13:50116610:G:A	rs79964374	G	A	G	Sox2_MA0143.3	17	0	-	0	0	.
chr13	50192103	50192104	chr13:50192104:G:A	rs1359613	G	A	A	Sox2_MA0143.3	-13	0	+	0	0	.
chr13	50222005	50222006	chr13:50222006:A:G	rs2066654	A	G	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr13	50233347	50233348	chr13:50233348:A:G	rs9562953	A	G	A	Sox2_MA0143.3	-12	0	-	0	0	.
chr13	50276734	50276735	chr13:50276735:G:A	rs806330	G	A	A	Sox2_MA0143.3	13	0	+	0	0	.
chr13	50339737	50339738	chr13:50339738:T:A	rs12853498	T	A	T	Sox2_MA0143.3	-2	0	-	0	0	.
chr13	50556972	50556973	chr13:50556973:G:A	rs1149825	G	A	g	Sox2_MA0143.3	-10	0	+	0	0	.
chr13	50670932	50670933	chr13:50670933:T:G	rs59935083	T	G	T	Sox2_MA0143.3	11	0	-	0	0	.
chr13	50678429	50678430	chr13:50678430:A:G	rs61074977	A	G	A	Sox2_MA0143.3	14	0	+	0	0	.
chr13	50732824	50732825	chr13:50732825:T:G	rs2812242	T	G	T	Sox2_MA0143.3	23	0	+	0	0	.
chr13	50756288	50756289	chr13:50756289:C:T	rs572849	C	T	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr13	50868044	50868045	chr13:50868045:A:G	rs665354	A	G	A	Sox2_MA0143.3	6	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr13	50901984	50901985	chr13:50901985:A:G	rs74998667	A	G	A	Sox2_MA0143.3	25	0	+	0	0	.
chr13	50964839	50964840	chr13:50964840:A:G	rs7318931	A	G	A	Sox2_MA0143.3	24	0	+	0	0	.
chr13	50977720	50977721	chr13:50977721:G:T	rs79893918	G	T	G	Sox2_MA0143.3	-5	0	+	0	0	.
chr13	50993624	50993625	chr13:50993625:C:T	rs61962230	C	T	C	Sox2_MA0143.3	14	0	+	0	0	.
chr13	51001934	51001935	chr13:51001935:T:C	rs746618165	T	C	T	Sox2_MA0143.3	-4	0	+	0	0	.
chr13	51033692	51033693	chr13:51033693:G:A	rs114338214	G	A	g	Sox2_MA0143.3	-9	0	+	0	0	.
chr13	51116247	51116248	chr13:51116248:G:A	rs8002769	G	A	A	Sox2_MA0143.3	11	0	-	0	0	.
chr13	51223256	51223257	chr13:51223257:G:C	rs9568554	G	C	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr13	51240390	51240391	chr13:51240391:T:G	rs6561625	T	G	T	Sox2_MA0143.3	-4	0	-	0	0	.
chr13	51300036	51300037	chr13:51300037:C:T	rs9596495	C	T	C	Sox2_MA0143.3	14	0	+	0	0	.
chr13	51357016	51357017	chr13:51357017:G:A	rs10454626	G	A	A	Sox2_MA0143.3	-19	0	-	0	0	.
chr13	51504545	51504546	chr13:51504546:G:A	rs9535701	G	A	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr13	51519437	51519438	chr13:51519438:G:T	rs1537464	G	T	G	Sox2_MA0143.3	17	0	-	0	0	.
chr13	51525364	51525365	chr13:51525365:T:A	rs183745539	T	A	T	Sox2_MA0143.3	-13	0	+	0	0	.
chr13	51633351	51633352	chr13:51633352:C:A	rs9535722	C	A	C	Sox2_MA0143.3	15	0	+	0	0	.
chr13	51771500	51771501	chr13:51771501:G:C	rs2296028	G	C	G	Sox2_MA0143.3	15	0	-	0	0	.
chr13	51815293	51815294	chr13:51815294:A:G	rs150063336	A	G	A	Sox2_MA0143.3	9	0	+	0	0	.
chr13	51865993	51865994	chr13:51865994:A:G	rs1054515	A	G	A	Sox2_MA0143.3	-5	0	-	0	0	.
chr13	52125697	52125698	chr13:52125698:G:A	rs9568713	G	A	G	Sox2_MA0143.3	15	0	-	0	0	.
chr13	52349536	52349537	chr13:52349537:A:G	rs61957976	A	G	G	Sox2_MA0143.3	17	0	+	0	0	.
chr13	52599388	52599389	chr13:52599389:G:A	rs9536183	G	A	g	Sox2_MA0143.3	-10	0	+	0	0	.
chr13	52689130	52689131	chr13:52689131:C:T	rs1036452	C	T	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr13	52758216	52758217	chr13:52758217:T:C	rs9316585	T	C	A	Sox2_MA0143.3	6	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr13	52766138	52766139	chr13:52766139:T:G	rs9568759	T	G	T	Sox2_MA0143.3	-12	0	+	0	0	.
chr13	52880352	52880353	chr13:52880353:A:G	rs7981516	A	G	A	Sox2_MA0143.3	-4	0	+	0	0	.
chr13	52940963	52940964	chr13:52940964:G:A	rs79941128	G	A	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr13	53039913	53039914	chr13:53039914:G:C	rs73480913	G	C	G	Sox2_MA0143.3	22	0	-	0	0	.
chr13	53079974	53079975	chr13:53079975:G:A	rs75783087	G	A	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr13	53161228	53161229	chr13:53161229:G:A	rs2806929	G	A	G	Sox2_MA0143.3	21	0	+	0	0	.
chr13	53240846	53240847	chr13:53240847:G:T	rs150503913	G	T	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr13	53327974	53327975	chr13:53327975:A:G	rs9536394	A	G	A	Sox2_MA0143.3	-2	0	+	0	0	.
chr13	53327998	53327999	chr13:53327999:G:A	rs9536395	G	A	G	Sox2_MA0143.3	22	0	+	0	0	.
chr13	53408534	53408535	chr13:53408535:A:G	rs894842	A	G	A	Sox2_MA0143.3	24	0	-	0	0	.
chr13	53500511	53500512	chr13:53500512:A:G	rs9536439	A	G	A	Sox2_MA0143.3	7	1	+	3.5547341015215945	8.864090315184848	CCTTTGTA
chr13	53537039	53537040	chr13:53537040:C:A	rs1927850	C	A	A	Sox2_MA0143.3	-17	0	+	0	0	.
chr13	53788456	53788457	chr13:53788457:A:G	rs9527135	A	G	A	Sox2_MA0143.3	-8	0	+	0	0	.
chr13	53788488	53788489	chr13:53788489:A:G	rs9568925	A	G	A	Sox2_MA0143.3	24	0	+	0	0	.
chr13	53856084	53856085	chr13:53856085:T:C	rs9568946	T	C	T	Sox2_MA0143.3	12	0	-	0	0	.
chr13	54029522	54029523	chr13:54029523:A:T	rs55657808	A	T	A	Sox2_MA0143.3	-15	0	-	0	0	.
chr13	54078611	54078612	chr13:54078612:C:G	rs7329099	C	G	C	Sox2_MA0143.3	0	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr13	54311301	54311302	chr13:54311302:C:A	rs4884962	C	A	A	Sox2_MA0143.3	11	0	-	0	0	.
chr13	54323487	54323488	chr13:54323488:G:A	rs9591581	G	A	A	Sox2_MA0143.3	24	0	-	0	0	.
chr13	54373619	54373620	chr13:54373620:G:C	rs9536695	G	C	G	Sox2_MA0143.3	1	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr13	54586132	54586133	chr13:54586133:A:G	rs7994187	A	G	A	Sox2_MA0143.3	-8	0	+	0	0	.
chr13	54677947	54677948	chr13:54677948:C:A	rs9536814	C	A	A	Sox2_MA0143.3	19	0	-	0	0	.
chr13	54706031	54706032	chr13:54706032:C:T	rs73193786	C	T	c	Sox2_MA0143.3	-3	0	-	0	0	.
chr13	55553092	55553093	chr13:55553093:A:T	rs570561	A	T	T	Sox2_MA0143.3	-7	0	-	0	0	.
chr13	55576727	55576728	chr13:55576728:A:G	rs667915	A	G	G	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr13	55576749	55576750	chr13:55576750:T:C	rs667958	T	C	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr13	55739599	55739600	chr13:55739600:C:A	rs4884246	C	A	C	Sox2_MA0143.3	18	0	-	0	0	.
chr13	56192347	56192348	chr13:56192348:A:G	rs1512649	A	G	G	Sox2_MA0143.3	4	1	-	3.5547341015215945	-3.3540206777936254	CCTTTGTA
chr13	57095474	57095475	chr13:57095475:A:T	rs61961129	A	T	A	Sox2_MA0143.3	22	0	-	0	0	.
chr13	57182885	57182886	chr13:57182886:T:G	rs4884276	T	G	T	Sox2_MA0143.3	-3	0	-	0	0	.
chr13	57825473	57825474	chr13:57825474:C:A	rs9569759	C	A	A	Sox2_MA0143.3	27	0	-	0	0	.
chr13	58051950	58051951	chr13:58051951:G:A	rs639423	G	A	G	Sox2_MA0143.3	16	0	-	0	0	.
chr13	58081211	58081212	chr13:58081212:A:G	rs541453	A	G	A	Sox2_MA0143.3	-9	0	+	0	0	.
chr13	58093505	58093506	chr13:58093506:G:C	rs115359931	G	C	G	Sox2_MA0143.3	1	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr13	58516908	58516909	chr13:58516909:T:C	rs2183493	T	C	C	Sox2_MA0143.3	4	1	+	8.864090315184848	1.9553355358696274	CCTTTGTG
chr13	58516930	58516931	chr13:58516931:G:A	rs2183492	G	A	A	Sox2_MA0143.3	26	0	+	0	0	.
chr13	58579150	58579151	chr13:58579151:C:T	rs9597782	C	T	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr13	58598515	58598516	chr13:58598516:T:G	rs9538136	T	G	T	Sox2_MA0143.3	-8	0	-	0	0	.
chr13	58823757	58823758	chr13:58823758:A:G	rs9527900	A	G	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr13	59145729	59145730	chr13:59145730:G:A	rs7984602	G	A	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr13	59223997	59223998	chr13:59223998:A:G	rs9538338	A	G	A	Sox2_MA0143.3	-14	0	+	0	0	.
chr13	59319641	59319642	chr13:59319642:A:G	rs9591981	A	G	A	Sox2_MA0143.3	-20	0	-	0	0	.
chr13	59355801	59355802	chr13:59355802:G:A	rs10220135	G	A	G	Sox2_MA0143.3	17	0	-	0	0	.
chr13	59476344	59476345	chr13:59476345:G:A	rs73545627	G	A	G	Sox2_MA0143.3	18	0	-	0	0	.
chr13	59479921	59479922	chr13:59479922:C:A	rs12584470	C	A	C	Sox2_MA0143.3	-5	0	-	0	0	.
chr13	59532829	59532830	chr13:59532830:T:G	rs7995937	T	G	T	Sox2_MA0143.3	17	0	-	0	0	.
chr13	59585906	59585907	chr13:59585907:A:G	rs595315	A	G	G	Sox2_MA0143.3	24	0	-	0	0	.
chr13	59585930	59585931	chr13:59585931:G:A	rs506806	G	A	G	Sox2_MA0143.3	0	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr13	59630854	59630855	chr13:59630855:T:C	rs343134	T	C	T	Sox2_MA0143.3	22	0	+	0	0	.
chr13	59633615	59633616	chr13:59633616:T:C	rs343136	T	C	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr13	59766543	59766544	chr13:59766544:T:C	rs9528037	T	C	T	Sox2_MA0143.3	3	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr13	59847084	59847085	chr13:59847085:A:T	rs341504	A	T	A	Sox2_MA0143.3	13	0	-	0	0	.
chr13	59950345	59950346	chr13:59950346:A:T	rs73545333	A	T	a	Sox2_MA0143.3	-13	0	+	0	0	.
chr13	60028076	60028077	chr13:60028077:A:C	rs183923623	A	C	A	Sox2_MA0143.3	19	0	+	0	0	.
chr13	60114834	60114835	chr13:60114835:T:C	rs190868206	T	C	T	Sox2_MA0143.3	-1	0	-	0	0	.
chr13	60134743	60134744	chr13:60134744:A:G	rs80121081	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr13	60149146	60149147	chr13:60149147:A:G	rs7982258	A	G	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr13	60279548	60279549	chr13:60279549:A:C	rs9570288	A	C	C	Sox2_MA0143.3	2	1	+	8.676919043985553	2.5582713367092715	CCATTGTG
chr13	60311655	60311656	chr13:60311656:G:A	rs79467185	G	A	G	Sox2_MA0143.3	-16	0	-	0	0	.
chr13	60327614	60327615	chr13:60327615:A:G	chr13:60327615:A:G	A	G	A	Sox2_MA0143.3	-16	0	+	0	0	.
chr13	60331403	60331404	chr13:60331404:T:C	rs78647512	T	C	T	Sox2_MA0143.3	-1	0	+	0	0	.
chr13	60591614	60591615	chr13:60591615:T:C	rs79508458	T	C	T	Sox2_MA0143.3	-19	0	+	0	0	.
chr13	60591798	60591799	chr13:60591799:C:T	rs11148504	C	T	T	Sox2_MA0143.3	1	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr13	60679318	60679319	chr13:60679319:A:G	rs4886253	A	G	G	Sox2_MA0143.3	19	0	-	0	0	.
chr13	60857399	60857400	chr13:60857400:T:G	rs301678	T	G	G	Sox2_MA0143.3	18	0	+	0	0	.
chr13	61111123	61111124	chr13:61111124:G:A	rs76033288	G	A	G	Sox2_MA0143.3	1	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr13	61247113	61247114	chr13:61247114:A:G	rs2323225	A	G	A	Sox2_MA0143.3	-6	0	+	0	0	.
chr13	61381844	61381845	chr13:61381845:C:T	rs9539143	C	T	T	Sox2_MA0143.3	7	1	-	8.676919043985553	3.3675628303222993	CCATTGTG
chr13	61408111	61408112	chr13:61408112:A:G	rs11843302	A	G	A	Sox2_MA0143.3	-10	0	+	0	0	.
chr13	61558446	61558447	chr13:61558447:C:G	rs7322929	C	G	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr13	61776966	61776967	chr13:61776967:A:G	rs9539302	A	G	A	Sox2_MA0143.3	-2	0	+	0	0	.
chr13	61778731	61778732	chr13:61778732:C:T	rs9528397	C	T	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr13	61973511	61973512	chr13:61973512:C:T	rs9539377	C	T	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr13	63046174	63046175	chr13:63046175:A:C	rs78884310	A	C	a	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr13	63066046	63066047	chr13:63066047:G:A	rs79815842	G	A	G	Sox2_MA0143.3	14	0	-	0	0	.
chr13	63209059	63209060	chr13:63209060:A:G	rs9592248	A	G	A	Sox2_MA0143.3	3	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr13	63351834	63351835	chr13:63351835:T:A	rs12584238	T	A	T	Sox2_MA0143.3	-4	0	-	0	0	.
chr13	63433784	63433785	chr13:63433785:A:G	rs597714	A	G	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr13	63545013	63545014	chr13:63545014:C:A	rs9539805	C	A	C	Sox2_MA0143.3	21	0	-	0	0	.
chr13	63575205	63575206	chr13:63575206:A:G	rs1602447	A	G	A	Sox2_MA0143.3	24	0	+	0	0	.
chr13	63738118	63738119	chr13:63738119:T:G	rs9805255	T	G	N	Sox2_MA0143.3	21	0	+	0	0	.
chr13	63738774	63738775	chr13:63738775:C:T	rs117062473	C	T	c	Sox2_MA0143.3	11	0	-	0	0	.
chr13	63739993	63739994	chr13:63739994:T:C	rs9571019	T	C	t	Sox2_MA0143.3	2	1	+	8.864090315184848	2.5582713367092715	CCTTTGTG
chr13	63740647	63740648	chr13:63740648:G:T	rs573133499	G	T	g	Sox2_MA0143.3	-11	0	+	0	0	.
chr13	63740668	63740669	chr13:63740669:C:G	rs149452018	C	G	c	Sox2_MA0143.3	10	0	+	0	0	.
chr13	63843497	63843498	chr13:63843498:G:T	rs61958601	G	T	.	Sox2_MA0143.3	1	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr13	63860172	63860173	chr13:63860173:A:C	rs61958606	A	C	A	Sox2_MA0143.3	24	0	+	0	0	.
chr13	64159045	64159046	chr13:64159046:A:G	rs73503209	A	G	A	Sox2_MA0143.3	19	0	-	0	0	.
chr13	64195286	64195287	chr13:64195287:A:G	rs4466967	A	G	G	Sox2_MA0143.3	2	1	+	8.676919043985553	2.5582713367092715	CCATTGTG
chr13	64195287	64195288	chr13:64195288:T:G	rs4274321	T	G	G	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr13	64300353	64300354	chr13:64300354:T:A	rs9598768	T	A	T	Sox2_MA0143.3	14	0	-	0	0	.
chr13	64368459	64368460	chr13:64368460:T:A	rs9598778	T	A	A	Sox2_MA0143.3	27	0	-	0	0	.
chr13	64394121	64394122	chr13:64394122:A:G	rs1487247	A	G	A	Sox2_MA0143.3	4	1	-	8.676919043985553	1.7681642646703322	CCATTGTG
chr13	64411047	64411048	chr13:64411048:A:C	rs9540079	A	C	C	Sox2_MA0143.3	10	0	-	0	0	.
chr13	64442001	64442002	chr13:64442002:C:T	rs41367248	C	T	C	Sox2_MA0143.3	9	0	+	0	0	.
chr13	64936255	64936256	chr13:64936256:A:G	rs9592377	A	G	A	Sox2_MA0143.3	6	1	-	9.019595766176417	2.110840986861197	CCATTGTC
chr13	64991799	64991800	chr13:64991800:A:G	rs12429635	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr13	64992858	64992859	chr13:64992859:G:C	rs79948182	G	C	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr13	65293186	65293187	chr13:65293187:G:A	rs9571341	G	A	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr13	65750063	65750064	chr13:65750064:A:G	rs9540542	A	G	A	Sox2_MA0143.3	-16	0	+	0	0	.
chr13	66072256	66072257	chr13:66072257:C:T	rs9599064	C	T	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr13	66099010	66099011	chr13:66099011:C:T	rs9540636	C	T	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr13	66177625	66177626	chr13:66177626:T:G	rs9317579	T	G	G	Sox2_MA0143.3	23	0	-	0	0	.
chr13	66328596	66328597	chr13:66328597:G:A	rs17081131	G	A	G	Sox2_MA0143.3	17	0	+	0	0	.
chr13	66546819	66546820	chr13:66546820:G:A	rs9540802	G	A	A	Sox2_MA0143.3	23	0	+	0	0	.
chr13	66755782	66755783	chr13:66755783:T:G	rs9571646	T	G	T	Sox2_MA0143.3	14	0	-	0	0	.
chr13	66781485	66781486	chr13:66781486:G:A	rs912192	G	A	A	Sox2_MA0143.3	-17	0	-	0	0	.
chr13	66965337	66965338	chr13:66965338:C:T	rs61266462	C	T	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr13	67127543	67127544	chr13:67127544:C:A	rs17589160	C	A	c	Sox2_MA0143.3	26	0	-	0	0	.
chr13	67130577	67130578	chr13:67130578:A:G	chr13:67130578:A:G	A	G	A	Sox2_MA0143.3	3	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr13	67215878	67215879	chr13:67215879:T:C	rs12584315	T	C	T	Sox2_MA0143.3	-5	0	-	0	0	.
chr13	67226802	67226803	chr13:67226803:G:A	rs9571740	G	A	G	Sox2_MA0143.3	5	1	+	9.019595766176417	2.110840986861197	CCATTGTC
chr13	67324257	67324258	chr13:67324258:T:G	rs3013578	T	G	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr13	68262162	68262163	chr13:68262163:A:C	rs1261707	A	C	A	Sox2_MA0143.3	-14	0	+	0	0	.
chr13	68382061	68382062	chr13:68382062:G:T	rs9571895	G	T	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr13	68394047	68394048	chr13:68394048:T:G	rs7995590	T	G	T	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr13	68406161	68406162	chr13:68406162:G:A	rs9564453	G	A	A	Sox2_MA0143.3	-20	0	+	0	0	.
chr13	68872553	68872554	chr13:68872554:G:T	chr13:68872554:G:T	G	T	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr13	68885453	68885454	chr13:68885454:C:T	rs2492538	C	T	T	Sox2_MA0143.3	-12	0	-	0	0	.
chr13	68983538	68983539	chr13:68983539:A:G	rs9564513	A	G	A	Sox2_MA0143.3	-14	0	+	0	0	.
chr13	69109992	69109993	chr13:69109993:G:A	rs9529513	G	A	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr13	69363696	69363697	chr13:69363697:A:C	rs2225722	A	C	A	Sox2_MA0143.3	-9	0	-	0	0	.
chr13	69537701	69537702	chr13:69537702:A:C	chr13:69537702:A:C	A	C	A	Sox2_MA0143.3	13	0	-	0	0	.
chr13	69684484	69684485	chr13:69684485:C:T	rs75630916	C	T	C	Sox2_MA0143.3	27	0	-	0	0	.
chr13	69857334	69857335	chr13:69857335:C:T	rs138583257	C	T	C	Sox2_MA0143.3	1	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr13	69947653	69947654	chr13:69947654:C:T	rs2210454	C	T	T	Sox2_MA0143.3	11	0	+	0	0	.
chr13	70032080	70032081	chr13:70032081:C:T	rs1441578	C	T	T	Sox2_MA0143.3	27	0	+	0	0	.
chr13	70297865	70297866	chr13:70297866:T:G	rs76338107	T	G	T	Sox2_MA0143.3	18	0	-	0	0	.
chr13	70386206	70386207	chr13:70386207:A:G	rs76731858	A	G	A	Sox2_MA0143.3	4	1	-	8.676919043985553	1.7681642646703322	CCATTGTG
chr13	70432464	70432465	chr13:70432465:G:A	rs9542313	G	A	A	Sox2_MA0143.3	-12	0	+	0	0	.
chr13	70672547	70672548	chr13:70672548:G:A	rs143417140	G	A	G	Sox2_MA0143.3	-9	0	+	0	0	.
chr13	71015823	71015824	chr13:71015824:C:T	rs1701806	C	T	T	Sox2_MA0143.3	-14	0	-	0	0	.
chr13	71287422	71287423	chr13:71287423:T:C	rs12584330	T	C	T	Sox2_MA0143.3	24	0	+	0	0	.
chr13	71290615	71290616	chr13:71290616:T:G	rs9318002	T	G	G	Sox2_MA0143.3	9	0	-	0	0	.
chr13	71540255	71540256	chr13:71540256:G:A	rs17088321	G	A	G	Sox2_MA0143.3	27	0	-	0	0	.
chr13	71621808	71621809	chr13:71621809:C:T	rs118185911	C	T	C	Sox2_MA0143.3	22	0	+	0	0	.
chr13	72044188	72044189	chr13:72044189:G:T	rs9318053	G	T	G	Sox2_MA0143.3	14	0	+	0	0	.
chr13	72063069	72063070	chr13:72063070:A:G	rs9592820	A	G	A	Sox2_MA0143.3	4	1	-	9.206767037375712	2.2980122580604916	CCTTTGTC
chr13	72073054	72073055	chr13:72073055:G:A	rs9542844	G	A	G	Sox2_MA0143.3	22	0	-	0	0	.
chr13	72120860	72120861	chr13:72120861:C:G	rs1467667	C	G	C	Sox2_MA0143.3	5	1	-	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr13	72143076	72143077	chr13:72143077:T:A	rs9572896	T	A	T	Sox2_MA0143.3	2	1	+	3.5547341015215945	3.3675628303222993	CCTTTGTA
chr13	72182014	72182015	chr13:72182015:C:T	rs75735794	C	T	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr13	72199996	72199997	chr13:72199997:G:A	rs7322998	G	A	G	Sox2_MA0143.3	19	0	+	0	0	.
chr13	72249721	72249722	chr13:72249722:C:T	rs61970669	C	T	C	Sox2_MA0143.3	16	0	-	0	0	.
chr13	72304183	72304184	chr13:72304184:C:T	rs75712050	C	T	T	Sox2_MA0143.3	-12	0	-	0	0	.
chr13	72391245	72391246	chr13:72391246:A:C	rs114146900	A	C	G	Sox2_MA0143.3	27	0	+	0	0	.
chr13	72407455	72407456	chr13:72407456:C:G	rs9529999	C	G	c	Sox2_MA0143.3	-15	0	+	0	0	.
chr13	72412504	72412505	chr13:72412505:A:G	rs9542940	A	G	G	Sox2_MA0143.3	2	1	+	9.613475778572903	3.494828071296623	CCATTGTT
chr13	72473111	72473112	chr13:72473112:A:G	rs9542963	A	G	G	Sox2_MA0143.3	-3	0	+	0	0	.
chr13	72474391	72474392	chr13:72474392:G:C	rs981481357	G	C	G	Sox2_MA0143.3	1	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr13	72514301	72514302	chr13:72514302:C:T	rs139077657	C	T	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr13	72626238	72626239	chr13:72626239:C:A	rs12866028	C	A	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr13	72653945	72653946	chr13:72653946:C:T	rs9530059	C	T	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr13	72677366	72677367	chr13:72677367:G:A	rs9318105	G	A	G	Sox2_MA0143.3	8	0	-	0	0	.
chr13	72959803	72959804	chr13:72959804:C:T	rs9543183	C	T	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr13	73000255	73000256	chr13:73000256:A:G	rs925022388	A	G	A	Sox2_MA0143.3	-13	0	+	0	0	.
chr13	73000275	73000276	chr13:73000276:C:G	rs1029092	C	G	C	Sox2_MA0143.3	7	1	+	9.206767037375712	8.864090315184848	CCTTTGTC
chr13	73045530	73045531	chr13:73045531:G:T	rs79587636	G	T	G	Sox2_MA0143.3	23	0	+	0	0	.
chr13	73138036	73138037	chr13:73138037:C:T	rs12873808	C	T	T	Sox2_MA0143.3	-16	0	+	0	0	.
chr13	73168779	73168780	chr13:73168780:A:T	rs17089937	A	T	A	Sox2_MA0143.3	27	0	-	0	0	.
chr13	73194502	73194503	chr13:73194503:C:T	rs9318143	C	T	C	Sox2_MA0143.3	22	0	-	0	0	.
chr13	73201718	73201719	chr13:73201719:G:C	rs77899072	G	C	G	Sox2_MA0143.3	1	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr13	73201724	73201725	chr13:73201725:A:T	rs9543263	A	T	A	Sox2_MA0143.3	-5	0	-	0	0	.
chr13	73216550	73216551	chr13:73216551:A:G	rs937144845	A	G	A	Sox2_MA0143.3	3	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr13	73228533	73228534	chr13:73228534:A:G	rs9543280	A	G	A	Sox2_MA0143.3	16	0	+	0	0	.
chr13	73259270	73259271	chr13:73259271:A:G	rs1050032544	A	G	A	Sox2_MA0143.3	-6	0	-	0	0	.
chr13	73326467	73326468	chr13:73326468:G:A	rs9600114	G	A	G	Sox2_MA0143.3	27	0	-	0	0	.
chr13	73423385	73423386	chr13:73423386:T:G	rs9573191	T	G	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr13	73482353	73482354	chr13:73482354:C:T	rs12869212	C	T	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr13	73780871	73780872	chr13:73780872:C:T	rs9318216	C	T	T	Sox2_MA0143.3	-16	0	-	0	0	.
chr13	73828930	73828931	chr13:73828931:T:C	rs111488815	T	C	T	Sox2_MA0143.3	3	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr13	73971750	73971751	chr13:73971751:T:C	rs28405082	T	C	C	Sox2_MA0143.3	11	0	-	0	0	.
chr13	73986125	73986126	chr13:73986126:T:A	rs7983164	T	A	A	Sox2_MA0143.3	12	0	-	0	0	.
chr13	73986132	73986133	chr13:73986133:C:T	rs115878049	C	T	T	Sox2_MA0143.3	5	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr13	74005721	74005722	chr13:74005722:C:T	rs13378952	C	T	C	Sox2_MA0143.3	5	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr13	74005743	74005744	chr13:74005744:T:C	rs9565067	T	C	T	Sox2_MA0143.3	-17	0	-	0	0	.
chr13	74027093	74027094	chr13:74027094:C:A	rs1324917	C	A	C	Sox2_MA0143.3	20	0	-	0	0	.
chr13	74084366	74084367	chr13:74084367:T:G	rs9543524	T	G	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr13	74135975	74135976	chr13:74135976:T:C	rs1406210970	T	C	T	Sox2_MA0143.3	-20	0	-	0	0	.
chr13	74174933	74174934	chr13:74174934:A:G	rs1337042	A	G	G	Sox2_MA0143.3	18	0	-	0	0	.
chr13	74306734	74306735	chr13:74306735:A:G	rs141492850	A	G	A	Sox2_MA0143.3	11	0	-	0	0	.
chr13	74420728	74420729	chr13:74420729:G:C	rs4885190	G	C	G	Sox2_MA0143.3	18	0	-	0	0	.
chr13	74451339	74451340	chr13:74451340:C:A	rs4885192	C	A	C	Sox2_MA0143.3	20	0	-	0	0	.
chr13	74476183	74476184	chr13:74476184:G:A	rs112121623	G	A	A	Sox2_MA0143.3	-7	0	-	0	0	.
chr13	74476438	74476439	chr13:74476439:T:A	rs1931921	T	A	A	Sox2_MA0143.3	-17	0	+	0	0	.
chr13	74478436	74478437	chr13:74478437:C:G	rs9573393	C	G	G	Sox2_MA0143.3	13	0	-	0	0	.
chr13	74784226	74784227	chr13:74784227:G:A	rs943601	G	A	G	Sox2_MA0143.3	0	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr13	74795719	74795720	chr13:74795720:A:T	rs9318304	A	T	A	Sox2_MA0143.3	17	0	+	0	0	.
chr13	74859380	74859381	chr13:74859381:A:C	rs2028931	A	C	C	Sox2_MA0143.3	22	0	-	0	0	.
chr13	75196089	75196090	chr13:75196090:A:C	rs118140257	A	C	A	Sox2_MA0143.3	-13	0	+	0	0	.
chr13	75380045	75380046	chr13:75380046:C:A	rs7991823	C	A	C	Sox2_MA0143.3	0	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr13	75414222	75414223	chr13:75414223:T:A	rs7321494	T	A	A	Sox2_MA0143.3	27	0	-	0	0	.
chr13	75461279	75461280	chr13:75461280:G:C	rs9573548	G	C	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr13	75468487	75468488	chr13:75468488:C:T	rs9543937	C	T	C	Sox2_MA0143.3	-20	0	-	0	0	.
chr13	75486823	75486824	chr13:75486824:G:A	rs74094413	G	A	G	Sox2_MA0143.3	1	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr13	75486837	75486838	chr13:75486838:G:C	rs554843386	G	C	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr13	75724965	75724966	chr13:75724966:C:T	rs76785286	C	T	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr13	75908093	75908094	chr13:75908094:C:T	rs2120065	C	T	T	Sox2_MA0143.3	15	0	-	0	0	.
chr13	76039446	76039447	chr13:76039447:A:G	rs73215684	A	G	A	Sox2_MA0143.3	24	0	-	0	0	.
chr13	76159948	76159949	chr13:76159949:A:G	rs12050008	A	G	A	Sox2_MA0143.3	3	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr13	76215563	76215564	chr13:76215564:G:A	rs9573814	G	A	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr13	76215643	76215644	chr13:76215644:G:A	rs9573815	G	A	A	Sox2_MA0143.3	20	0	-	0	0	.
chr13	76215679	76215680	chr13:76215680:A:G	rs73226187	A	G	A	Sox2_MA0143.3	-16	0	-	0	0	.
chr13	76227989	76227990	chr13:76227990:G:A	rs73539387	G	A	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr13	76498174	76498175	chr13:76498175:C:G	rs436442	C	G	C	Sox2_MA0143.3	1	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr13	76570918	76570919	chr13:76570919:A:C	rs7987165	A	C	A	Sox2_MA0143.3	12	0	-	0	0	.
chr13	76610580	76610581	chr13:76610581:G:A	rs9573891	G	A	G	Sox2_MA0143.3	23	0	-	0	0	.
chr13	76865381	76865382	chr13:76865382:A:G	rs1539467	A	G	G	Sox2_MA0143.3	19	0	+	0	0	.
chr13	76885085	76885086	chr13:76885086:G:A	rs41287030	G	A	G	Sox2_MA0143.3	7	1	-	9.206767037375712	9.800647049772198	CCTTTGTC
chr13	76926753	76926754	chr13:76926754:C:G	rs661400	C	G	G	Sox2_MA0143.3	5	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr13	76944388	76944389	chr13:76944389:T:C	rs146927281	T	C	T	Sox2_MA0143.3	-12	0	-	0	0	.
chr13	76991321	76991322	chr13:76991322:G:C	rs9573970	G	C	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr13	77291336	77291337	chr13:77291337:C:T	rs188158022	C	T	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr13	77565853	77565854	chr13:77565854:A:T	rs34469540	A	T	A	Sox2_MA0143.3	-15	0	+	0	0	.
chr13	77606635	77606636	chr13:77606636:C:T	rs2274015	C	T	C	Sox2_MA0143.3	19	0	-	0	0	.
chr13	77981850	77981851	chr13:77981851:T:G	rs7318232	T	G	t	Sox2_MA0143.3	-3	0	+	0	0	.
chr13	78033097	78033098	chr13:78033098:T:C	rs73233133	T	C	T	Sox2_MA0143.3	-11	0	+	0	0	.
chr13	78046234	78046235	chr13:78046235:C:T	rs2585528	C	T	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr13	78067440	78067441	chr13:78067441:A:T	rs17068814	A	T	A	Sox2_MA0143.3	-15	0	+	0	0	.
chr13	78086220	78086221	chr13:78086221:C:T	rs2775136	C	T	T	Sox2_MA0143.3	-15	0	-	0	0	.
chr13	78188126	78188127	chr13:78188127:C:T	rs9530758	C	T	C	Sox2_MA0143.3	12	0	-	0	0	.
chr13	78538035	78538036	chr13:78538036:A:G	rs12858977	A	G	A	Sox2_MA0143.3	-7	0	-	0	0	.
chr13	78744076	78744077	chr13:78744077:A:C	rs2255186	A	C	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr13	78786941	78786942	chr13:78786942:A:G	rs4885577	A	G	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr13	78844089	78844090	chr13:78844090:G:A	rs113129111	G	A	G	Sox2_MA0143.3	14	0	+	0	0	.
chr13	79018326	79018327	chr13:79018327:G:A	rs1596033	G	A	G	Sox2_MA0143.3	8	0	+	0	0	.
chr13	79141235	79141236	chr13:79141236:T:C	rs150657466	T	C	T	Sox2_MA0143.3	-10	0	+	0	0	.
chr13	79282986	79282987	chr13:79282987:T:C	rs943710	T	C	T	Sox2_MA0143.3	-14	0	-	0	0	.
chr13	79282989	79282990	chr13:79282990:C:T	rs943709	C	T	T	Sox2_MA0143.3	-17	0	-	0	0	.
chr13	79407044	79407045	chr13:79407045:T:A	rs2296287	T	A	T	Sox2_MA0143.3	-8	0	-	0	0	.
chr13	79525643	79525644	chr13:79525644:G:A	rs991936422	G	A	G	Sox2_MA0143.3	19	0	-	0	0	.
chr13	79617681	79617682	chr13:79617682:C:G	rs9545154	C	G	C	Sox2_MA0143.3	0	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr13	79775925	79775926	chr13:79775926:C:A	rs74099693	C	A	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr13	79791919	79791920	chr13:79791920:G:A	rs143025356	G	A	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr13	79869377	79869378	chr13:79869378:T:G	rs9545244	T	G	T	Sox2_MA0143.3	-11	0	-	0	0	.
chr13	80103422	80103423	chr13:80103423:T:A	rs1327313	T	A	T	Sox2_MA0143.3	-8	0	+	0	0	.
chr13	80175659	80175660	chr13:80175660:G:C	rs649698	G	C	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr13	80182777	80182778	chr13:80182778:G:A	rs7320754	G	A	G	Sox2_MA0143.3	-16	0	-	0	0	.
chr13	80213813	80213814	chr13:80213814:A:T	rs12583009	A	T	A	Sox2_MA0143.3	12	0	+	0	0	.
chr13	80523366	80523367	chr13:80523367:C:G	rs138057498	C	G	C	Sox2_MA0143.3	16	0	+	0	0	.
chr13	80689043	80689044	chr13:80689044:G:T	rs2104214	G	T	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr13	80717069	80717070	chr13:80717070:C:A	rs970535760	C	A	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr13	80813437	80813438	chr13:80813438:G:A	rs12867108	G	A	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr13	80813443	80813444	chr13:80813444:C:T	rs9593484	C	T	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr13	80879455	80879456	chr13:80879456:G:A	rs2503392	G	A	A	Sox2_MA0143.3	-3	0	-	0	0	.
chr13	80991767	80991768	chr13:80991768:T:C	rs4885745	T	C	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr13	81224339	81224340	chr13:81224340:T:C	rs60802930	T	C	T	Sox2_MA0143.3	-13	0	+	0	0	.
chr13	81339798	81339799	chr13:81339799:A:G	rs1146981	A	G	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr13	81400642	81400643	chr13:81400643:A:G	chr13:81400643:A:G	A	G	A	Sox2_MA0143.3	21	0	-	0	0	.
chr13	81792216	81792217	chr13:81792217:C:T	rs450868	C	T	C	Sox2_MA0143.3	26	0	+	0	0	.
chr13	81872777	81872778	chr13:81872778:T:C	rs9545903	T	C	T	Sox2_MA0143.3	-6	0	-	0	0	.
chr13	81874423	81874424	chr13:81874424:G:C	rs9601746	G	C	G	Sox2_MA0143.3	1	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr13	81968046	81968047	chr13:81968047:A:G	rs9545935	A	G	A	Sox2_MA0143.3	-19	0	+	0	0	.
chr13	82425927	82425928	chr13:82425928:T:A	rs76496253	T	A	T	Sox2_MA0143.3	-10	0	-	0	0	.
chr13	82655010	82655011	chr13:82655011:C:A	rs9318894	C	A	C	Sox2_MA0143.3	25	0	-	0	0	.
chr13	82657682	82657683	chr13:82657683:G:C	rs75696239	G	C	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr13	82677524	82677525	chr13:82677525:A:G	rs58317419	A	G	A	Sox2_MA0143.3	-9	0	+	0	0	.
chr13	82817211	82817212	chr13:82817212:T:G	rs61961333	T	G	T	Sox2_MA0143.3	20	0	-	0	0	.
chr13	82884696	82884697	chr13:82884697:G:A	rs1118131	G	A	A	Sox2_MA0143.3	24	0	+	0	0	.
chr13	83186926	83186927	chr13:83186927:G:A	rs9546318	G	A	G	Sox2_MA0143.3	17	0	+	0	0	.
chr13	83400165	83400166	chr13:83400166:C:T	rs189794408	C	T	C	Sox2_MA0143.3	21	0	-	0	0	.
chr13	83584851	83584852	chr13:83584852:G:A	rs73252463	G	A	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr13	83845421	83845422	chr13:83845422:T:C	rs79043647	T	C	T	Sox2_MA0143.3	-8	0	-	0	0	.
chr13	84207330	84207331	chr13:84207331:C:G	rs2774062	C	G	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr13	84310247	84310248	chr13:84310248:T:A	rs9602442	T	A	A	Sox2_MA0143.3	-3	0	+	0	0	.
chr13	84455463	84455464	chr13:84455464:A:C	rs12584867	A	C	C	Sox2_MA0143.3	27	0	+	0	0	.
chr13	85249254	85249255	chr13:85249255:A:T	rs2479707	A	T	A	Sox2_MA0143.3	-5	0	+	0	0	.
chr13	85269292	85269293	chr13:85269293:C:T	rs2497416	C	T	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr13	85712664	85712665	chr13:85712665:A:T	rs1556770	A	T	A	Sox2_MA0143.3	3	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr13	85982126	85982127	chr13:85982127:G:A	rs4576964	G	A	A	Sox2_MA0143.3	-6	0	-	0	0	.
chr13	86087813	86087814	chr13:86087814:T:A	rs74102184	T	A	T	Sox2_MA0143.3	-19	0	+	0	0	.
chr13	86087906	86087907	chr13:86087907:C:T	rs9547497	C	T	T	Sox2_MA0143.3	-20	0	+	0	0	.
chr13	86357988	86357989	chr13:86357989:A:G	rs28669170	A	G	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr13	86438234	86438235	chr13:86438235:T:G	rs9519268	T	G	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr13	86585791	86585792	chr13:86585792:G:A	rs7993301	G	A	G	Sox2_MA0143.3	19	0	-	0	0	.
chr13	86722050	86722051	chr13:86722051:A:G	rs9515843	A	G	A	Sox2_MA0143.3	20	0	+	0	0	.
chr13	86788823	86788824	chr13:86788824:G:C	rs7333973	G	C	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr13	86923133	86923134	chr13:86923134:G:A	rs34795217	G	A	G	Sox2_MA0143.3	1	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr13	87053200	87053201	chr13:87053201:C:T	rs9516366	C	T	C	Sox2_MA0143.3	14	0	+	0	0	.
chr13	88002294	88002295	chr13:88002295:T:A	rs2083697	T	A	T	Sox2_MA0143.3	22	0	+	0	0	.
chr13	88017248	88017249	chr13:88017249:A:G	rs7984609	A	G	A	Sox2_MA0143.3	-13	0	-	0	0	.
chr13	88463467	88463468	chr13:88463468:C:T	rs338701	C	T	T	Sox2_MA0143.3	-20	0	+	0	0	.
chr13	89450791	89450792	chr13:89450792:C:T	rs9522567	C	T	T	Sox2_MA0143.3	25	0	+	0	0	.
chr13	89458295	89458296	chr13:89458296:A:G	rs951126999	A	G	A	Sox2_MA0143.3	13	0	+	0	0	.
chr13	89496645	89496646	chr13:89496646:T:C	rs17395268	T	C	T	Sox2_MA0143.3	11	0	-	0	0	.
chr13	89551250	89551251	chr13:89551251:C:T	rs9301583	C	T	C	Sox2_MA0143.3	27	0	-	0	0	.
chr13	89932625	89932626	chr13:89932626:G:A	rs11069953	G	A	G	Sox2_MA0143.3	-2	0	+	0	0	.
chr13	90067301	90067302	chr13:90067302:A:G	rs77191234	A	G	A	Sox2_MA0143.3	8	0	+	0	0	.
chr13	90341122	90341123	chr13:90341123:C:T	rs9522936	C	T	C	Sox2_MA0143.3	15	0	-	0	0	.
chr13	90968695	90968696	chr13:90968696:T:C	rs9523214	T	C	T	Sox2_MA0143.3	22	0	+	0	0	.
chr13	91079393	91079394	chr13:91079394:G:A	rs1903167	G	A	A	Sox2_MA0143.3	-18	0	-	0	0	.
chr13	91155393	91155394	chr13:91155394:G:C	rs287500	G	C	C	Sox2_MA0143.3	20	0	+	0	0	.
chr13	91243923	91243924	chr13:91243924:A:G	rs115617751	A	G	A	Sox2_MA0143.3	26	0	+	0	0	.
chr13	91348928	91348929	chr13:91348929:G:T	rs867659937	G	T	G	Sox2_MA0143.3	17	0	-	0	0	.
chr13	91348964	91348965	chr13:91348965:T:C	rs948931300	T	C	T	Sox2_MA0143.3	-19	0	-	0	0	.
chr13	91366797	91366798	chr13:91366798:G:T	rs79793616	G	T	G	Sox2_MA0143.3	8	0	-	0	0	.
chr13	91498441	91498442	chr13:91498442:C:T	rs7999520	C	T	T	Sox2_MA0143.3	5	1	-	8.676919043985553	1.7681642646703324	CCATTGTG
chr13	91572964	91572965	chr13:91572965:C:T	rs76882186	C	T	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr13	91652927	91652928	chr13:91652928:C:G	rs9589322	C	G	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr13	91654010	91654011	chr13:91654011:C:T	rs72643220	C	T	C	Sox2_MA0143.3	0	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr13	91654016	91654017	chr13:91654017:T:C	rs16946409	T	C	C	Sox2_MA0143.3	6	1	+	9.613475778572903	2.7047209992576837	CCATTGTT
chr13	91669277	91669278	chr13:91669278:A:G	rs6492560	A	G	G	Sox2_MA0143.3	19	0	-	0	0	.
chr13	91709377	91709378	chr13:91709378:C:G	rs150566816	C	G	C	Sox2_MA0143.3	1	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr13	91722117	91722118	chr13:91722118:A:G	rs383194	A	G	A	Sox2_MA0143.3	6	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr13	91917504	91917505	chr13:91917505:G:C	rs9523447	G	C	N	Sox2_MA0143.3	-3	0	-	0	0	.
chr13	92224786	92224787	chr13:92224787:C:T	rs151073267	C	T	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr13	92224813	92224814	chr13:92224814:A:G	rs59410447	A	G	A	Sox2_MA0143.3	24	0	+	0	0	.
chr13	92345821	92345822	chr13:92345822:C:G	rs7325768	C	G	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr13	92775535	92775536	chr13:92775536:C:G	rs7994061	C	G	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr13	92901930	92901931	chr13:92901931:C:T	rs1360819	C	T	C	Sox2_MA0143.3	18	0	+	0	0	.
chr13	92911676	92911677	chr13:92911677:A:G	rs9523828	A	G	A	Sox2_MA0143.3	15	0	+	0	0	.
chr13	93206781	93206782	chr13:93206782:C:T	rs9516193	C	T	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr13	93317124	93317125	chr13:93317125:T:C	rs7320857	T	C	T	Sox2_MA0143.3	27	0	+	0	0	.
chr13	93327517	93327518	chr13:93327518:T:C	rs7992679	T	C	C	Sox2_MA0143.3	25	0	-	0	0	.
chr13	93432607	93432608	chr13:93432608:G:A	rs74108531	G	A	g	Sox2_MA0143.3	-2	0	-	0	0	.
chr13	94256902	94256903	chr13:94256903:A:G	rs728572	A	G	A	Sox2_MA0143.3	18	0	+	0	0	.
chr13	94302955	94302956	chr13:94302956:A:G	rs185706043	A	G	A	Sox2_MA0143.3	10	0	-	0	0	.
chr13	94706992	94706993	chr13:94706993:G:T	rs150707223	G	T	G	Sox2_MA0143.3	11	0	-	0	0	.
chr13	94992571	94992572	chr13:94992572:G:A	rs11618784	G	A	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr13	95152342	95152343	chr13:95152343:T:C	rs775880247	T	C	T	Sox2_MA0143.3	13	0	+	0	0	.
chr13	95153861	95153862	chr13:95153862:G:A	rs1050002080	G	A	G	Sox2_MA0143.3	25	0	-	0	0	.
chr13	95260589	95260590	chr13:95260590:G:A	rs17268275	G	A	G	Sox2_MA0143.3	10	0	-	0	0	.
chr13	95354392	95354393	chr13:95354393:T:C	rs34080759	T	C	T	Sox2_MA0143.3	4	1	+	8.676919043985553	1.7681642646703322	CCATTGTG
chr13	95364605	95364606	chr13:95364606:T:C	rs11070123	T	C	T	Sox2_MA0143.3	-10	0	+	0	0	.
chr13	95397684	95397685	chr13:95397685:C:T	rs55981153	C	T	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr13	95406427	95406428	chr13:95406428:G:A	rs1538336	G	A	A	Sox2_MA0143.3	14	0	-	0	0	.
chr13	95434225	95434226	chr13:95434226:C:T	rs7333503	C	T	T	Sox2_MA0143.3	14	0	-	0	0	.
chr13	95505505	95505506	chr13:95505506:C:T	rs17189775	C	T	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr13	95531882	95531883	chr13:95531883:T:G	rs7982853	T	G	T	Sox2_MA0143.3	21	0	-	0	0	.
chr13	95553732	95553733	chr13:95553733:G:A	rs1220966516	G	A	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr13	95554809	95554810	chr13:95554810:T:C	rs77414127	T	C	T	Sox2_MA0143.3	6	1	+	8.676919043985553	1.7681642646703326	CCATTGTG
chr13	95565251	95565252	chr13:95565252:C:T	rs75232468	C	T	C	Sox2_MA0143.3	27	0	+	0	0	.
chr13	96157962	96157963	chr13:96157963:G:A	rs7330650	G	A	G	Sox2_MA0143.3	14	0	-	0	0	.
chr13	96338198	96338199	chr13:96338199:A:G	rs11842501	A	G	A	Sox2_MA0143.3	23	0	-	0	0	.
chr13	96733817	96733818	chr13:96733818:G:A	rs1924582	G	A	G	Sox2_MA0143.3	13	0	+	0	0	.
chr13	96770915	96770916	chr13:96770916:G:A	rs36099717	G	A	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr13	97006002	97006003	chr13:97006003:T:C	rs79365429	T	C	T	Sox2_MA0143.3	19	0	-	0	0	.
chr13	97116831	97116832	chr13:97116832:T:C	rs117717698	T	C	T	Sox2_MA0143.3	24	0	+	0	0	.
chr13	97224409	97224410	chr13:97224410:G:A	rs181998114	G	A	G	Sox2_MA0143.3	21	0	-	0	0	.
chr13	97224434	97224435	chr13:97224435:C:T	rs72637444	C	T	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr13	97288532	97288533	chr13:97288533:G:A	rs759826046	G	A	G	Sox2_MA0143.3	27	0	-	0	0	.
chr13	97296175	97296176	chr13:97296176:A:C	rs116802084	A	C	A	Sox2_MA0143.3	25	0	+	0	0	.
chr13	97329450	97329451	chr13:97329451:C:G	rs61972768	C	G	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr13	97329463	97329464	chr13:97329464:G:C	rs61972769	G	C	C	Sox2_MA0143.3	7	1	+	8.676919043985553	9.019595766176417	CCATTGTG
chr13	97360838	97360839	chr13:97360839:T:C	rs7318956	T	C	T	Sox2_MA0143.3	-20	0	-	0	0	.
chr13	97361409	97361410	chr13:97361410:G:A	rs74106939	G	A	G	Sox2_MA0143.3	23	0	-	0	0	.
chr13	97477455	97477456	chr13:97477456:A:T	rs1467693	A	T	T	Sox2_MA0143.3	23	0	-	0	0	.
chr13	97573229	97573230	chr13:97573230:G:A	rs60276769	G	A	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr13	97683999	97684000	chr13:97684000:T:C	rs80046398	T	C	T	Sox2_MA0143.3	-13	0	+	0	0	.
chr13	97719996	97719997	chr13:97719997:G:C	rs7328072	G	C	G	Sox2_MA0143.3	0	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr13	97875517	97875518	chr13:97875518:G:A	rs73552546	G	A	A	Sox2_MA0143.3	21	0	+	0	0	.
chr13	98044758	98044759	chr13:98044759:C:G	rs11842705	C	G	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr13	98054537	98054538	chr13:98054538:C:T	rs6491398	C	T	T	Sox2_MA0143.3	11	0	-	0	0	.
chr13	98054547	98054548	chr13:98054548:G:A	rs74108129	G	A	G	Sox2_MA0143.3	1	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr13	98153112	98153113	chr13:98153113:G:T	rs78624974	G	T	T	Sox2_MA0143.3	22	0	+	0	0	.
chr13	98214694	98214695	chr13:98214695:C:T	rs9554450	C	T	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr13	98226553	98226554	chr13:98226554:A:G	rs8002043	A	G	A	Sox2_MA0143.3	20	0	+	0	0	.
chr13	98232963	98232964	chr13:98232964:A:G	rs9513376	A	G	A	Sox2_MA0143.3	-4	0	+	0	0	.
chr13	98252534	98252535	chr13:98252535:G:A	rs188198481	G	A	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr13	98260871	98260872	chr13:98260872:A:C	rs9517237	A	C	A	Sox2_MA0143.3	-6	0	-	0	0	.
chr13	98275960	98275961	chr13:98275961:C:T	rs36120981	C	T	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr13	98313595	98313596	chr13:98313596:A:G	rs9517254	A	G	A	Sox2_MA0143.3	12	0	+	0	0	.
chr13	98368704	98368705	chr13:98368705:C:G	rs9556940	C	G	C	Sox2_MA0143.3	21	0	+	0	0	.
chr13	98437509	98437510	chr13:98437510:A:G	rs9584847	A	G	A	Sox2_MA0143.3	11	0	-	0	0	.
chr13	98478755	98478756	chr13:98478756:T:C	rs79025709	T	C	T	Sox2_MA0143.3	-5	0	+	0	0	.
chr13	98531804	98531805	chr13:98531805:G:A	rs9517338	G	A	G	Sox2_MA0143.3	12	0	-	0	0	.
chr13	98563436	98563437	chr13:98563437:G:A	rs187875193	G	A	G	Sox2_MA0143.3	25	0	-	0	0	.
chr13	98574996	98574997	chr13:98574997:T:G	rs7989979	T	G	T	Sox2_MA0143.3	-18	0	-	0	0	.
chr13	98579523	98579524	chr13:98579524:T:A	rs113991378	T	A	T	Sox2_MA0143.3	7	1	+	9.613475778572903	3.3675628303222993	CCATTGTT
chr13	98599645	98599646	chr13:98599646:G:T	rs4772106	G	T	G	Sox2_MA0143.3	0	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr13	98653793	98653794	chr13:98653794:T:C	rs140791089	T	C	T	Sox2_MA0143.3	-14	0	+	0	0	.
chr13	98658536	98658537	chr13:98658537:A:G	rs9557003	A	G	G	Sox2_MA0143.3	2	1	-	9.800647049772198	3.494828071296623	CCTTTGTT
chr13	98707048	98707049	chr13:98707049:C:G	rs1782672	C	G	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr13	98772482	98772483	chr13:98772483:C:T	rs185171501	C	T	c	Sox2_MA0143.3	27	0	-	0	0	.
chr13	98772492	98772493	chr13:98772493:G:A	rs76440251	G	A	G	Sox2_MA0143.3	17	0	-	0	0	.
chr13	98775961	98775962	chr13:98775962:T:C	rs111680224	T	C	C	Sox2_MA0143.3	2	1	-	8.676919043985553	2.5582713367092715	CCATTGTG
chr13	98921566	98921567	chr13:98921567:C:T	rs4772157	C	T	T	Sox2_MA0143.3	23	0	+	0	0	.
chr13	98975889	98975890	chr13:98975890:A:C	rs961017792	A	C	A	Sox2_MA0143.3	17	0	-	0	0	.
chr13	98988439	98988440	chr13:98988440:T:C	rs9517528	T	C	T	Sox2_MA0143.3	26	0	-	0	0	.
chr13	99004010	99004011	chr13:99004011:C:A	rs12869795	C	A	C	Sox2_MA0143.3	25	0	+	0	0	.
chr13	99215709	99215710	chr13:99215710:C:A	rs187110183	C	A	C	Sox2_MA0143.3	0	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr13	99339965	99339966	chr13:99339966:G:A	rs139223843	G	A	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr13	99359226	99359227	chr13:99359227:G:A	chr13:99359227:G:A	G	A	G	Sox2_MA0143.3	24	0	-	0	0	.
chr13	99381634	99381635	chr13:99381635:G:A	rs7317555	G	A	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr13	99465023	99465024	chr13:99465024:C:T	rs4393428	C	T	C	Sox2_MA0143.3	18	0	+	0	0	.
chr13	99546215	99546216	chr13:99546216:G:C	rs7987474	G	C	G	Sox2_MA0143.3	13	0	-	0	0	.
chr13	99610563	99610564	chr13:99610564:G:A	rs2763937	G	A	A	Sox2_MA0143.3	0	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr13	99634844	99634845	chr13:99634845:G:A	rs9517808	G	A	G	Sox2_MA0143.3	9	0	-	0	0	.
chr13	99650747	99650748	chr13:99650748:C:G	rs59120090	C	G	C	Sox2_MA0143.3	11	0	+	0	0	.
chr13	99686907	99686908	chr13:99686908:A:T	rs4400905	A	T	A	Sox2_MA0143.3	-6	0	+	0	0	.
chr13	99804169	99804170	chr13:99804170:A:G	rs754004	A	G	G	Sox2_MA0143.3	2	1	-	8.864090315184848	2.5582713367092715	CCTTTGTG
chr13	99859749	99859750	chr13:99859750:T:C	rs17658053	T	C	T	Sox2_MA0143.3	18	0	-	0	0	.
chr13	99860920	99860921	chr13:99860921:G:A	rs9557319	G	A	G	Sox2_MA0143.3	-12	0	+	0	0	.
chr13	99926328	99926329	chr13:99926329:G:C	rs115540143	G	C	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr13	99980161	99980162	chr13:99980162:C:T	rs144113743	C	T	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr13	100089129	100089130	chr13:100089130:T:G	rs753799002	T	G	T	Sox2_MA0143.3	-6	0	-	0	0	.
chr13	100089143	100089144	chr13:100089144:A:G	rs117397004	A	G	A	Sox2_MA0143.3	-20	0	-	0	0	.
chr13	100197002	100197003	chr13:100197003:A:G	rs2039677	A	G	A	Sox2_MA0143.3	23	0	+	0	0	.
chr13	100392749	100392750	chr13:100392750:A:G	rs998410423	A	G	A	Sox2_MA0143.3	18	0	+	0	0	.
chr13	100462831	100462832	chr13:100462832:A:G	rs11069396	A	G	A	Sox2_MA0143.3	13	0	+	0	0	.
chr13	100589473	100589474	chr13:100589474:T:G	rs11843314	T	G	T	Sox2_MA0143.3	-18	0	-	0	0	.
chr13	100639423	100639424	chr13:100639424:A:G	rs182049057	A	G	A	Sox2_MA0143.3	-2	0	+	0	0	.
chr13	100695011	100695012	chr13:100695012:C:A	rs190998450	C	A	C	Sox2_MA0143.3	12	0	-	0	0	.
chr13	100695020	100695021	chr13:100695021:A:G	rs766674533	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr13	100772482	100772483	chr13:100772483:A:T	rs938527	A	T	t	Sox2_MA0143.3	7	1	+	3.5547341015215945	9.800647049772198	CCTTTGTA
chr13	100790492	100790493	chr13:100790493:G:A	rs9554728	G	A	G	Sox2_MA0143.3	16	0	-	0	0	.
chr13	100800610	100800611	chr13:100800611:C:T	rs74633378	C	T	C	Sox2_MA0143.3	12	0	-	0	0	.
chr13	100809272	100809273	chr13:100809273:C:A	rs55894608	C	A	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr13	100854884	100854885	chr13:100854885:G:T	rs7337388	G	T	T	Sox2_MA0143.3	-16	0	+	0	0	.
chr13	100875276	100875277	chr13:100875277:T:G	rs1007849442	T	G	T	Sox2_MA0143.3	-8	0	+	0	0	.
chr13	100981969	100981970	chr13:100981970:G:C	rs76941131	G	C	G	Sox2_MA0143.3	23	0	+	0	0	.
chr13	101017345	101017346	chr13:101017346:T:G	rs1980806	T	G	T	Sox2_MA0143.3	7	1	+	9.613475778572903	8.676919043985553	CCATTGTT
chr13	101150921	101150922	chr13:101150922:A:T	rs6491600	A	T	A	Sox2_MA0143.3	26	0	-	0	0	.
chr13	101176918	101176919	chr13:101176919:C:T	rs12020054	C	T	T	Sox2_MA0143.3	23	0	+	0	0	.
chr13	101203046	101203047	chr13:101203047:T:C	rs7329882	T	C	T	Sox2_MA0143.3	3	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr13	101211192	101211193	chr13:101211193:A:G	rs2181789	A	G	G	Sox2_MA0143.3	12	0	-	0	0	.
chr13	101314814	101314815	chr13:101314815:T:C	rs504050	T	C	T	Sox2_MA0143.3	-5	0	-	0	0	.
chr13	101366945	101366946	chr13:101366946:A:G	rs7999688	A	G	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr13	101382300	101382301	chr13:101382301:G:A	rs9554778	G	A	G	Sox2_MA0143.3	17	0	+	0	0	.
chr13	101382300	101382301	chr13:101382301:G:C	chr13:101382301:G:C	G	C	G	Sox2_MA0143.3	17	0	+	0	0	.
chr13	101383755	101383756	chr13:101383756:C:T	rs1572592	C	T	T	Sox2_MA0143.3	26	0	+	0	0	.
chr13	101624737	101624738	chr13:101624738:A:G	rs919492920	A	G	A	Sox2_MA0143.3	-6	0	+	0	0	.
chr13	101624764	101624765	chr13:101624765:G:A	rs142246593	G	A	G	Sox2_MA0143.3	21	0	+	0	0	.
chr13	101855898	101855899	chr13:101855899:A:G	rs11619533	A	G	A	Sox2_MA0143.3	23	0	+	0	0	.
chr13	101863966	101863967	chr13:101863967:G:A	rs3918326	G	A	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr13	102036181	102036182	chr13:102036182:A:G	rs76726420	A	G	A	Sox2_MA0143.3	-17	0	+	0	0	.
chr13	102066816	102066817	chr13:102066817:C:G	rs79110766	C	G	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr13	102096874	102096875	chr13:102096875:G:T	rs12856166	G	T	N	Sox2_MA0143.3	-17	0	-	0	0	.
chr13	102121227	102121228	chr13:102121228:C:T	rs4771419	C	T	C	Sox2_MA0143.3	-5	0	-	0	0	.
chr13	102168545	102168546	chr13:102168546:G:C	rs509193	G	C	C	Sox2_MA0143.3	-12	0	-	0	0	.
chr13	102177066	102177067	chr13:102177067:C:T	rs7995765	C	T	T	Sox2_MA0143.3	-18	0	-	0	0	.
chr13	102192168	102192169	chr13:102192169:T:G	rs113911142	T	G	T	Sox2_MA0143.3	-18	0	-	0	0	.
chr13	102203140	102203141	chr13:102203141:C:T	rs655067	C	T	T	Sox2_MA0143.3	-10	0	+	0	0	.
chr13	102333548	102333549	chr13:102333549:T:A	rs9582572	T	A	T	Sox2_MA0143.3	23	0	-	0	0	.
chr13	102457464	102457465	chr13:102457465:G:A	rs562664041	G	A	G	Sox2_MA0143.3	1	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr13	102457466	102457467	chr13:102457467:A:G	rs576094128	A	G	A	Sox2_MA0143.3	-1	0	-	0	0	.
chr13	102596308	102596309	chr13:102596309:G:A	chr13:102596309:G:A	G	A	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr13	102643880	102643881	chr13:102643881:G:A	rs925055433	G	A	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr13	102643892	102643893	chr13:102643893:A:G	rs680840	A	G	A	Sox2_MA0143.3	-7	0	+	0	0	.
chr13	102655009	102655010	chr13:102655010:G:A	rs677179	G	A	A	Sox2_MA0143.3	-4	0	+	0	0	.
chr13	102812816	102812817	chr13:102812817:G:A	rs61966024	G	A	G	Sox2_MA0143.3	21	0	-	0	0	.
chr13	102828041	102828042	chr13:102828042:T:C	rs16960590	T	C	T	Sox2_MA0143.3	2	1	-	8.676919043985553	2.5582713367092715	CCATTGTG
chr13	102935808	102935809	chr13:102935809:G:A	rs16960780	G	A	G	Sox2_MA0143.3	-3	0	+	0	0	.
chr13	102948269	102948270	chr13:102948270:A:T	rs74109941	A	T	A	Sox2_MA0143.3	-5	0	-	0	0	.
chr13	103056127	103056128	chr13:103056128:T:C	rs7324008	T	C	T	Sox2_MA0143.3	17	0	+	0	0	.
chr13	103285221	103285222	chr13:103285222:C:T	rs11618565	C	T	C	Sox2_MA0143.3	1	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr13	103373923	103373924	chr13:103373924:A:C	rs9582694	A	C	C	Sox2_MA0143.3	20	0	+	0	0	.
chr13	103452025	103452026	chr13:103452026:G:A	rs2065550	G	A	G	Sox2_MA0143.3	24	0	-	0	0	.
chr13	103510262	103510263	chr13:103510263:C:T	rs76880831	C	T	C	Sox2_MA0143.3	0	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr13	103592830	103592831	chr13:103592831:A:G	rs2026355	A	G	A	Sox2_MA0143.3	-10	0	+	0	0	.
chr13	103615822	103615823	chr13:103615823:T:C	rs13378814	T	C	T	Sox2_MA0143.3	25	0	+	0	0	.
chr13	103990177	103990178	chr13:103990178:C:G	rs190356480	C	G	C	Sox2_MA0143.3	11	0	+	0	0	.
chr13	104101068	104101069	chr13:104101069:A:T	rs954940	A	T	A	Sox2_MA0143.3	22	0	-	0	0	.
chr13	104111241	104111242	chr13:104111242:A:G	rs77996879	A	G	A	Sox2_MA0143.3	4	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr13	104132979	104132980	chr13:104132980:G:A	rs7332734	G	A	G	Sox2_MA0143.3	12	0	+	0	0	.
chr13	104195918	104195919	chr13:104195919:C:G	rs17370150	C	G	C	Sox2_MA0143.3	1	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr13	104239497	104239498	chr13:104239498:A:G	rs74885820	A	G	A	Sox2_MA0143.3	6	1	-	9.613475778572903	2.7047209992576837	CCATTGTT
chr13	104561251	104561252	chr13:104561252:A:G	rs1019982	A	G	A	Sox2_MA0143.3	-2	0	-	0	0	.
chr13	104817469	104817470	chr13:104817470:G:A	rs751570861	G	A	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr13	104967342	104967343	chr13:104967343:T:G	rs7996230	T	G	T	Sox2_MA0143.3	-15	0	+	0	0	.
chr13	105048981	105048982	chr13:105048982:A:C	rs9582930	A	C	A	Sox2_MA0143.3	17	0	+	0	0	.
chr13	105084028	105084029	chr13:105084029:A:G	rs78605323	A	G	A	Sox2_MA0143.3	-10	0	-	0	0	.
chr13	105135864	105135865	chr13:105135865:T:C	rs72653223	T	C	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr13	105255650	105255651	chr13:105255651:A:G	rs7337397	A	G	A	Sox2_MA0143.3	-8	0	+	0	0	.
chr13	105255653	105255654	chr13:105255654:G:A	rs16966186	G	A	g	Sox2_MA0143.3	-5	0	+	0	0	.
chr13	105335089	105335090	chr13:105335090:G:A	rs1408603	G	A	A	Sox2_MA0143.3	-12	0	-	0	0	.
chr13	105395211	105395212	chr13:105395212:C:A	rs1575633	C	A	C	Sox2_MA0143.3	1	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr13	105434397	105434398	chr13:105434398:C:G	rs9586853	C	G	G	Sox2_MA0143.3	7	1	-	8.676919043985553	9.019595766176417	CCATTGTG
chr13	105501486	105501487	chr13:105501487:G:A	rs9301034	G	A	G	Sox2_MA0143.3	-9	0	+	0	0	.
chr13	105665250	105665251	chr13:105665251:C:G	rs72659838	C	G	C	Sox2_MA0143.3	14	0	-	0	0	.
chr13	105721258	105721259	chr13:105721259:G:A	rs80264444	G	A	G	Sox2_MA0143.3	-3	0	-	0	0	.
chr13	105721270	105721271	chr13:105721271:G:A	rs9583032	G	A	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr13	105872637	105872638	chr13:105872638:A:G	rs9519816	A	G	G	Sox2_MA0143.3	27	0	-	0	0	.
chr13	106050283	106050284	chr13:106050284:A:G	rs9558671	A	G	A	Sox2_MA0143.3	4	1	-	3.5547341015215945	-3.3540206777936254	CCTTTGTA
chr13	106057265	106057266	chr13:106057266:C:T	rs7331381	C	T	C	Sox2_MA0143.3	19	0	+	0	0	.
chr13	106083976	106083977	chr13:106083977:A:G	rs192910022	A	G	A	Sox2_MA0143.3	9	0	-	0	0	.
chr13	106083984	106083985	chr13:106083985:G:A	rs117451676	G	A	G	Sox2_MA0143.3	1	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr13	106098962	106098963	chr13:106098963:C:T	rs541521486	C	T	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr13	106128908	106128909	chr13:106128909:C:T	rs1867109	C	T	C	Sox2_MA0143.3	18	0	+	0	0	.
chr13	106213203	106213204	chr13:106213204:G:A	rs7981244	G	A	G	Sox2_MA0143.3	13	0	+	0	0	.
chr13	106401091	106401092	chr13:106401092:A:T	rs1824720	A	T	A	Sox2_MA0143.3	14	0	+	0	0	.
chr13	106401095	106401096	chr13:106401096:T:C	rs61965279	T	C	T	Sox2_MA0143.3	18	0	+	0	0	.
chr13	106475994	106475995	chr13:106475995:G:A	rs1020659487	G	A	G	Sox2_MA0143.3	9	0	+	0	0	.
chr13	106476010	106476011	chr13:106476011:A:G	rs1077734	A	G	G	Sox2_MA0143.3	25	0	+	0	0	.
chr13	106562056	106562057	chr13:106562057:C:T	chr13:106562057:C:T	C	T	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr13	106590065	106590066	chr13:106590066:C:T	rs9520108	C	T	C	Sox2_MA0143.3	24	0	+	0	0	.
chr13	106630077	106630078	chr13:106630078:A:C	rs9514558	A	C	A	Sox2_MA0143.3	-16	0	-	0	0	.
chr13	106630924	106630925	chr13:106630925:C:G	rs3783055	C	G	N	Sox2_MA0143.3	14	0	-	0	0	.
chr13	106681849	106681850	chr13:106681850:C:A	rs995864	C	A	C	Sox2_MA0143.3	26	0	-	0	0	.
chr13	106712777	106712778	chr13:106712778:A:C	chr13:106712778:A:C	A	C	A	Sox2_MA0143.3	19	0	-	0	0	.
chr13	106714612	106714613	chr13:106714613:C:T	rs9555266	C	T	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr13	106866547	106866548	chr13:106866548:C:T	rs74113717	C	T	c	Sox2_MA0143.3	-8	0	-	0	0	.
chr13	106919802	106919803	chr13:106919803:A:T	rs74113744	A	T	A	Sox2_MA0143.3	18	0	+	0	0	.
chr13	107130744	107130745	chr13:107130745:C:G	rs4772853	C	G	C	Sox2_MA0143.3	26	0	+	0	0	.
chr13	107198467	107198468	chr13:107198468:G:A	rs12874556	G	A	G	Sox2_MA0143.3	-14	0	+	0	0	.
chr13	107215728	107215729	chr13:107215729:A:G	rs6492041	A	G	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr13	107271497	107271498	chr13:107271498:C:G	rs75312685	C	G	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr13	107290083	107290084	chr13:107290084:C:T	rs9558996	C	T	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr13	107293777	107293778	chr13:107293778:T:C	rs17367926	T	C	T	Sox2_MA0143.3	3	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr13	107330150	107330151	chr13:107330151:T:C	rs72650545	T	C	T	Sox2_MA0143.3	-3	0	+	0	0	.
chr13	107573073	107573074	chr13:107573074:T:G	rs2476782	T	G	T	Sox2_MA0143.3	-12	0	+	0	0	.
chr13	107596264	107596265	chr13:107596265:A:G	rs7990348	A	G	A	Sox2_MA0143.3	23	0	+	0	0	.
chr13	107843461	107843462	chr13:107843462:G:T	rs1509092	G	T	G	Sox2_MA0143.3	11	0	+	0	0	.
chr13	107964142	107964143	chr13:107964143:C:T	rs1876723	C	T	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr13	108020343	108020344	chr13:108020344:G:A	rs9514797	G	A	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr13	108060216	108060217	chr13:108060217:A:C	rs74117407	A	C	A	Sox2_MA0143.3	4	1	-	8.676919043985553	1.7681642646703322	CCATTGTG
chr13	108083198	108083199	chr13:108083199:G:T	rs16971838	G	T	G	Sox2_MA0143.3	23	0	+	0	0	.
chr13	108214260	108214261	chr13:108214261:C:T	rs3093742	C	T	T	Sox2_MA0143.3	-9	0	-	0	0	.
chr13	108419994	108419995	chr13:108419995:G:A	rs79676352	G	A	G	Sox2_MA0143.3	17	0	-	0	0	.
chr13	108419996	108419997	chr13:108419997:G:A	rs75722552	G	A	G	Sox2_MA0143.3	15	0	-	0	0	.
chr13	108495248	108495249	chr13:108495249:A:T	rs74115520	A	T	A	Sox2_MA0143.3	-4	0	+	0	0	.
chr13	108760290	108760291	chr13:108760291:G:A	rs9521010	G	A	G	Sox2_MA0143.3	-12	0	+	0	0	.
chr13	108786197	108786198	chr13:108786198:G:T	rs116537517	G	T	G	Sox2_MA0143.3	-3	0	+	0	0	.
chr13	108945467	108945468	chr13:108945468:A:G	rs113158252	A	G	A	Sox2_MA0143.3	-12	0	-	0	0	.
chr13	109072857	109072858	chr13:109072858:T:C	rs9301348	T	C	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr13	109155680	109155681	chr13:109155681:A:G	rs912323	A	G	G	Sox2_MA0143.3	10	0	-	0	0	.
chr13	109257472	109257473	chr13:109257473:A:G	rs635293	A	G	G	Sox2_MA0143.3	24	0	-	0	0	.
chr13	109275589	109275590	chr13:109275590:G:A	rs79617880	G	A	G	Sox2_MA0143.3	-16	0	-	0	0	.
chr13	109288514	109288515	chr13:109288515:T:C	rs4287436	T	C	c	Sox2_MA0143.3	12	0	-	0	0	.
chr13	109357344	109357345	chr13:109357345:T:G	rs55890934	T	G	T	Sox2_MA0143.3	17	0	+	0	0	.
chr13	109357848	109357849	chr13:109357849:G:A	rs944809057	G	A	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr13	109380195	109380196	chr13:109380196:G:A	rs2149201	G	A	A	Sox2_MA0143.3	-9	0	+	0	0	.
chr13	109474699	109474700	chr13:109474700:T:G	rs59963558	T	G	T	Sox2_MA0143.3	14	0	-	0	0	.
chr13	109512344	109512345	chr13:109512345:A:G	rs142510392	A	G	A	Sox2_MA0143.3	12	0	+	0	0	.
chr13	109610353	109610354	chr13:109610354:T:C	rs1001681	T	C	T	Sox2_MA0143.3	-7	0	-	0	0	.
chr13	109684931	109684932	chr13:109684932:G:C	rs1032765090	G	C	G	Sox2_MA0143.3	12	0	-	0	0	.
chr13	109718916	109718917	chr13:109718917:A:C	rs1411552	A	C	C	Sox2_MA0143.3	8	0	+	0	0	.
chr13	109723283	109723284	chr13:109723284:G:A	rs571137192	G	A	G	Sox2_MA0143.3	10	0	-	0	0	.
chr13	109729279	109729280	chr13:109729280:G:C	rs140022066	G	C	G	Sox2_MA0143.3	0	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr13	109732325	109732326	chr13:109732326:G:T	rs141916392	G	T	G	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr13	109740668	109740669	chr13:109740669:C:T	rs1550039	C	T	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr13	109794273	109794274	chr13:109794274:G:T	rs74123756	G	T	G	Sox2_MA0143.3	-12	0	+	0	0	.
chr13	109875055	109875056	chr13:109875056:A:G	rs336252	A	G	A	Sox2_MA0143.3	17	0	-	0	0	.
chr13	109875060	109875061	chr13:109875061:C:T	rs7986742	C	T	T	Sox2_MA0143.3	12	0	-	0	0	.
chr13	109943455	109943456	chr13:109943456:C:T	rs7982038	C	T	t	Sox2_MA0143.3	-3	0	-	0	0	.
chr13	109999896	109999897	chr13:109999897:A:G	rs10450818	A	G	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr13	110006558	110006559	chr13:110006559:A:G	rs75029846	A	G	A	Sox2_MA0143.3	18	0	-	0	0	.
chr13	110093066	110093067	chr13:110093067:C:A	rs60825883	C	A	c	Sox2_MA0143.3	11	0	+	0	0	.
chr13	110123535	110123536	chr13:110123536:C:T	rs577578547	C	T	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr13	110157515	110157516	chr13:110157516:G:A	rs9521624	G	A	G	Sox2_MA0143.3	7	1	-	9.206767037375712	9.800647049772198	CCTTTGTC
chr13	110157537	110157538	chr13:110157538:G:T	rs61964963	G	T	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr13	110180848	110180849	chr13:110180849:T:C	rs9515161	T	C	C	Sox2_MA0143.3	17	0	-	0	0	.
chr13	110221208	110221209	chr13:110221209:G:C	rs675605	G	C	G	Sox2_MA0143.3	19	0	-	0	0	.
chr13	110234246	110234247	chr13:110234247:C:T	rs923946	C	T	C	Sox2_MA0143.3	20	0	-	0	0	.
chr13	110234250	110234251	chr13:110234251:C:G	rs923945	C	G	C	Sox2_MA0143.3	16	0	-	0	0	.
chr13	110234269	110234270	chr13:110234270:G:A	rs149030506	G	A	G	Sox2_MA0143.3	-3	0	-	0	0	.
chr13	110300739	110300740	chr13:110300740:G:A	rs9515182	G	A	A	Sox2_MA0143.3	20	0	-	0	0	.
chr13	110303009	110303010	chr13:110303010:C:A	rs56201566	C	A	C	Sox2_MA0143.3	27	0	-	0	0	.
chr13	110334284	110334285	chr13:110334285:G:A	rs7330054	G	A	G	Sox2_MA0143.3	-3	0	+	0	0	.
chr13	110419736	110419737	chr13:110419737:A:G	rs34762491	A	G	A	Sox2_MA0143.3	17	0	-	0	0	.
chr13	110421362	110421363	chr13:110421363:C:T	rs9521755	C	T	T	Sox2_MA0143.3	-17	0	+	0	0	.
chr13	110448735	110448736	chr13:110448736:A:T	rs2391827	A	T	T	Sox2_MA0143.3	-9	0	-	0	0	.
chr13	110454576	110454577	chr13:110454577:C:T	rs56089941	C	T	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr13	110454603	110454604	chr13:110454604:G:A	rs568700432	G	A	G	Sox2_MA0143.3	20	0	+	0	0	.
chr13	110466600	110466601	chr13:110466601:C:T	rs7995370	C	T	C	Sox2_MA0143.3	26	0	-	0	0	.
chr13	110491407	110491408	chr13:110491408:T:C	rs413756	T	C	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr13	110509896	110509897	chr13:110509897:A:G	rs74124664	A	G	A	Sox2_MA0143.3	19	0	+	0	0	.
chr13	110509904	110509905	chr13:110509905:G:A	rs9559833	G	A	G	Sox2_MA0143.3	27	0	+	0	0	.
chr13	110515870	110515871	chr13:110515871:C:T	rs11617144	C	T	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr13	110520890	110520891	chr13:110520891:G:A	rs75239002	G	A	G	Sox2_MA0143.3	13	0	-	0	0	.
chr13	110564677	110564678	chr13:110564678:A:T	rs392473	A	T	A	Sox2_MA0143.3	20	0	-	0	0	.
chr13	110584418	110584419	chr13:110584419:G:A	rs4771695	G	A	G	Sox2_MA0143.3	21	0	+	0	0	.
chr13	110594263	110594264	chr13:110594264:A:G	rs7339015	A	G	G	Sox2_MA0143.3	4	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr13	110624843	110624844	chr13:110624844:G:C	rs4771700	G	C	C	Sox2_MA0143.3	12	0	+	0	0	.
chr13	110700520	110700521	chr13:110700521:C:T	chr13:110700521:C:T	C	T	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr13	110701762	110701763	chr13:110701763:T:C	rs9555724	T	C	T	Sox2_MA0143.3	-1	0	-	0	0	.
chr13	110712487	110712488	chr13:110712488:G:A	rs1323273997	G	A	G	Sox2_MA0143.3	1	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr13	110712847	110712848	chr13:110712848:T:C	rs144466308	T	C	T	Sox2_MA0143.3	-7	0	+	0	0	.
chr13	110767124	110767125	chr13:110767125:G:A	rs142783675	G	A	G	Sox2_MA0143.3	10	0	-	0	0	.
chr13	110888151	110888152	chr13:110888152:C:T	rs9583545	C	T	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr13	110914996	110914997	chr13:110914997:A:G	rs953197654	A	G	A	Sox2_MA0143.3	21	0	-	0	0	.
chr13	110915003	110915004	chr13:110915004:G:A	rs987350124	G	A	G	Sox2_MA0143.3	14	0	-	0	0	.
chr13	110915017	110915018	chr13:110915018:G:A	rs4773273	G	A	G	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr13	110915037	110915038	chr13:110915038:T:C	rs4773274	T	C	T	Sox2_MA0143.3	-20	0	-	0	0	.
chr13	110943530	110943531	chr13:110943531:A:G	rs7318697	A	G	.	Sox2_MA0143.3	8	0	-	0	0	.
chr13	110977084	110977085	chr13:110977085:T:C	rs7336325	T	C	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr13	110978705	110978706	chr13:110978706:T:C	rs117109488	T	C	T	Sox2_MA0143.3	-6	0	+	0	0	.
chr13	111027671	111027672	chr13:111027672:C:G	rs71440097	C	G	C	Sox2_MA0143.3	25	0	+	0	0	.
chr13	111059209	111059210	chr13:111059210:C:T	rs9583576	C	T	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr13	111059211	111059212	chr13:111059212:T:G	rs9588349	T	G	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr13	111059239	111059240	chr13:111059240:T:C	rs11839732	T	C	T	Sox2_MA0143.3	24	0	+	0	0	.
chr13	111143074	111143075	chr13:111143075:G:C	rs7337260	G	C	C	Sox2_MA0143.3	1	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr13	111286411	111286412	chr13:111286412:A:G	rs151019551	A	G	A	Sox2_MA0143.3	-10	0	+	0	0	.
chr13	111339940	111339941	chr13:111339941:C:T	rs2253707	C	T	C	Sox2_MA0143.3	1	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr13	111339966	111339967	chr13:111339967:A:G	rs2253706	A	G	A	Sox2_MA0143.3	27	0	+	0	0	.
chr13	111370904	111370905	chr13:111370905:G:A	rs76598374	G	A	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr13	111385184	111385185	chr13:111385185:G:A	rs74127899	G	A	g	Sox2_MA0143.3	19	0	-	0	0	.
chr13	111396309	111396310	chr13:111396310:T:C	rs2528767	T	C	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr13	111397843	111397844	chr13:111397844:C:T	rs9560053	C	T	C	Sox2_MA0143.3	19	0	+	0	0	.
chr13	111418591	111418592	chr13:111418592:T:C	rs2528744	T	C	C	Sox2_MA0143.3	2	1	+	9.800647049772198	3.494828071296623	CCTTTGTT
chr13	111451081	111451082	chr13:111451082:G:C	rs9301509	G	C	C	Sox2_MA0143.3	14	0	-	0	0	.
chr13	111473191	111473192	chr13:111473192:G:T	rs11843993	G	T	G	Sox2_MA0143.3	-2	0	+	0	0	.
chr13	111492583	111492584	chr13:111492584:G:C	rs2770237	G	C	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr13	111493673	111493674	chr13:111493674:G:A	rs116867803	G	A	G	Sox2_MA0143.3	17	0	+	0	0	.
chr13	111507425	111507426	chr13:111507426:T:C	rs1163857	T	C	C	Sox2_MA0143.3	8	0	+	0	0	.
chr13	111509281	111509282	chr13:111509282:C:T	rs117795290	C	T	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr13	111515825	111515826	chr13:111515826:T:C	rs6492369	T	C	C	Sox2_MA0143.3	27	0	+	0	0	.
chr13	111657919	111657920	chr13:111657920:G:A	rs4771770	G	A	A	Sox2_MA0143.3	-8	0	-	0	0	.
chr13	111668483	111668484	chr13:111668484:C:T	rs78308970	C	T	C	Sox2_MA0143.3	12	0	-	0	0	.
chr13	111668497	111668498	chr13:111668498:C:T	rs78174377	C	T	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr13	111846454	111846455	chr13:111846455:A:G	rs977148201	A	G	.	Sox2_MA0143.3	-15	0	+	0	0	.
chr13	111874068	111874069	chr13:111874069:T:G	rs4907649	T	G	G	Sox2_MA0143.3	9	0	-	0	0	.
chr13	111896375	111896376	chr13:111896376:G:A	rs7992153	G	A	G	Sox2_MA0143.3	18	0	-	0	0	.
chr13	111947143	111947144	chr13:111947144:C:T	rs9550222	C	T	T	Sox2_MA0143.3	24	0	+	0	0	.
chr13	111953822	111953823	chr13:111953823:C:T	rs1886189	C	T	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr13	111953827	111953828	chr13:111953828:G:C	rs1886188	G	C	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr13	111958705	111958706	chr13:111958706:G:T	rs6577020	G	T	G	Sox2_MA0143.3	0	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr13	111981544	111981545	chr13:111981545:C:T	rs9549350	C	T	c	Sox2_MA0143.3	-14	0	-	0	0	.
chr13	112059138	112059139	chr13:112059139:C:T	rs530487	C	T	T	Sox2_MA0143.3	-13	0	+	0	0	.
chr13	112154349	112154350	chr13:112154350:G:A	rs76644110	G	A	G	Sox2_MA0143.3	0	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr13	112154926	112154927	chr13:112154927:G:A	rs7334693	G	A	G	Sox2_MA0143.3	10	0	-	0	0	.
chr13	112154954	112154955	chr13:112154955:T:C	rs1550190	T	C	T	Sox2_MA0143.3	-18	0	-	0	0	.
chr13	112188712	112188713	chr13:112188713:G:C	rs4533164	G	C	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr13	112198358	112198359	chr13:112198359:T:G	rs4907674	T	G	T	Sox2_MA0143.3	8	0	-	0	0	.
chr13	112224395	112224396	chr13:112224396:C:T	rs280821	C	T	c	Sox2_MA0143.3	1	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr13	112353361	112353362	chr13:112353362:G:A	rs7982274	G	A	G	Sox2_MA0143.3	19	0	-	0	0	.
chr13	112353371	112353372	chr13:112353372:G:C	rs419974	G	C	C	Sox2_MA0143.3	9	0	-	0	0	.
chr13	112624747	112624748	chr13:112624748:G:A	rs80141241	G	A	g	Sox2_MA0143.3	-11	0	+	0	0	.
chr13	112624772	112624773	chr13:112624773:G:A	rs61962896	G	A	g	Sox2_MA0143.3	14	0	+	0	0	.
chr13	112665828	112665829	chr13:112665829:G:A	rs61961100	G	A	g	Sox2_MA0143.3	23	0	+	0	0	.
chr13	112688597	112688598	chr13:112688598:C:T	rs59334250	C	T	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr13	112736046	112736047	chr13:112736047:G:A	rs71446626	G	A	g	Sox2_MA0143.3	11	0	+	0	0	.
chr13	112741504	112741505	chr13:112741505:T:C	rs1756076	T	C	T	Sox2_MA0143.3	-12	0	-	0	0	.
chr13	112744904	112744905	chr13:112744905:A:G	rs416703	A	G	G	Sox2_MA0143.3	4	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr13	112771650	112771651	chr13:112771651:T:C	rs748364	T	C	T	Sox2_MA0143.3	-7	0	+	0	0	.
chr13	112875468	112875469	chr13:112875469:A:G	rs4907556	A	G	A	Sox2_MA0143.3	-4	0	+	0	0	.
chr13	112877909	112877910	chr13:112877910:C:T	rs2297801	C	T	C	Sox2_MA0143.3	16	0	+	0	0	.
chr13	112880755	112880756	chr13:112880756:T:A	rs143255671	T	A	T	Sox2_MA0143.3	-8	0	-	0	0	.
chr13	112891862	112891863	chr13:112891863:C:T	rs112804424	C	T	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr13	112952832	112952833	chr13:112952833:G:A	rs3011479	G	A	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr13	112959402	112959403	chr13:112959403:G:A	rs149853356	G	A	G	Sox2_MA0143.3	21	0	+	0	0	.
chr13	113001836	113001837	chr13:113001837:T:C	rs146407914	T	C	T	Sox2_MA0143.3	-8	0	+	0	0	.
chr13	113002354	113002355	chr13:113002355:A:G	rs148630804	A	G	A	Sox2_MA0143.3	25	0	+	0	0	.
chr13	113002427	113002428	chr13:113002428:C:T	rs55735944	C	T	C	Sox2_MA0143.3	27	0	-	0	0	.
chr13	113007677	113007678	chr13:113007678:G:C	rs190399749	G	C	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr13	113084488	113084489	chr13:113084489:A:G	rs1755693	A	G	a	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr13	113127530	113127531	chr13:113127531:G:A	chr13:113127531:G:A	G	A	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr13	113190744	113190745	chr13:113190745:T:C	rs556990	T	C	T	Sox2_MA0143.3	-1	0	-	0	0	.
chr13	113226930	113226931	chr13:113226931:G:T	rs138560093	G	T	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr13	113282464	113282465	chr13:113282465:G:A	rs4907603	G	A	G	Sox2_MA0143.3	12	0	-	0	0	.
chr13	113398154	113398155	chr13:113398155:G:A	rs9549763	G	A	A	Sox2_MA0143.3	-9	0	+	0	0	.
chr13	113405011	113405012	chr13:113405012:C:T	rs73571474	C	T	C	Sox2_MA0143.3	10	0	+	0	0	.
chr13	113445336	113445337	chr13:113445337:C:T	rs772050309	C	T	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr13	113460542	113460543	chr13:113460543:T:C	rs7985737	T	C	C	Sox2_MA0143.3	9	0	-	0	0	.
chr13	113469035	113469036	chr13:113469036:G:A	rs77515878	G	A	G	Sox2_MA0143.3	15	0	-	0	0	.
chr13	113489863	113489864	chr13:113489864:C:T	rs3814807	C	T	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr13	113500941	113500942	chr13:113500942:A:G	rs2260111	A	G	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr13	113540648	113540649	chr13:113540649:C:G	rs11618109	C	G	.	Sox2_MA0143.3	12	0	+	0	0	.
chr13	113544481	113544482	chr13:113544482:C:T	rs58483544	C	T	.	Sox2_MA0143.3	-7	0	+	0	0	.
chr13	113544936	113544937	chr13:113544937:C:T	rs2259238	C	T	.	Sox2_MA0143.3	21	0	+	0	0	.
chr13	113546862	113546863	chr13:113546863:G:A	rs75506779	G	A	.	Sox2_MA0143.3	19	0	+	0	0	.
chr13	113563140	113563141	chr13:113563141:C:G	rs7333085	C	G	G	Sox2_MA0143.3	25	0	-	0	0	.
chr13	113563154	113563155	chr13:113563155:G:A	rs9604157	G	A	A	Sox2_MA0143.3	11	0	-	0	0	.
chr13	113616599	113616600	chr13:113616600:G:T	rs936841813	G	T	G	Sox2_MA0143.3	8	0	+	0	0	.
chr13	113636817	113636818	chr13:113636818:G:T	rs368609697	G	T	G	Sox2_MA0143.3	20	0	-	0	0	.
chr13	113666887	113666888	chr13:113666888:T:A	rs79220224	T	A	A	Sox2_MA0143.3	27	0	+	0	0	.
chr13	113741598	113741599	chr13:113741599:A:G	rs148207426	A	G	a	Sox2_MA0143.3	2	1	+	8.676919043985553	2.5582713367092715	CCATTGTG
chr13	113784624	113784625	chr13:113784625:G:A	rs7399809	G	A	A	Sox2_MA0143.3	11	0	+	0	0	.
chr13	113786554	113786555	chr13:113786555:A:C	rs61966740	A	C	c	Sox2_MA0143.3	18	0	+	0	0	.
chr13	113796827	113796828	chr13:113796828:A:T	rs554445776	A	T	A	Sox2_MA0143.3	-14	0	+	0	0	.
chr13	113808107	113808108	chr13:113808108:A:G	rs560137886	A	G	A	Sox2_MA0143.3	3	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr13	113808108	113808109	chr13:113808109:T:C	rs7400003	T	C	C	Sox2_MA0143.3	2	1	-	9.613475778572903	3.494828071296623	CCATTGTT
chr13	113808109	113808110	chr13:113808110:G:A	rs9604512	G	A	A	Sox2_MA0143.3	1	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr13	113882479	113882480	chr13:113882480:C:T	rs559741673	C	T	C	Sox2_MA0143.3	20	0	-	0	0	.
chr13	113882480	113882481	chr13:113882481:G:A	rs7490083	G	A	G	Sox2_MA0143.3	19	0	-	0	0	.
chr13	113883046	113883047	chr13:113883047:G:A	rs188116891	G	A	G	Sox2_MA0143.3	15	0	+	0	0	.
chr13	113916330	113916331	chr13:113916331:G:T	rs7320154	G	T	G	Sox2_MA0143.3	17	0	-	0	0	.
chr13	113934247	113934248	chr13:113934248:A:C	rs9604542	A	C	C	Sox2_MA0143.3	3	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr13	113935654	113935655	chr13:113935655:C:T	rs113366916	C	T	c	Sox2_MA0143.3	-17	0	+	0	0	.
chr13	113935659	113935660	chr13:113935660:T:G	rs527546310	T	G	t	Sox2_MA0143.3	-12	0	+	0	0	.
chr13	113935692	113935693	chr13:113935693:C:T	rs28613440	C	T	t	Sox2_MA0143.3	21	0	+	0	0	.
chr13	113954671	113954672	chr13:113954672:G:A	rs937028759	G	A	g	Sox2_MA0143.3	13	0	-	0	0	.
chr13	113972117	113972118	chr13:113972118:A:C	rs898106837	A	C	A	Sox2_MA0143.3	-6	0	-	0	0	.
chr13	113998617	113998618	chr13:113998618:C:T	rs144169702	C	T	c	Sox2_MA0143.3	26	0	-	0	0	.
chr13	113998656	113998657	chr13:113998657:C:T	rs114715062	C	T	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr13	114007711	114007712	chr13:114007712:A:G	rs61971856	A	G	A	Sox2_MA0143.3	13	0	+	0	0	.
chr13	114046854	114046855	chr13:114046855:T:C	rs9525352	T	C	C	Sox2_MA0143.3	13	0	-	0	0	.
chr13	114082220	114082221	chr13:114082221:A:C	rs7989453	A	C	c	Sox2_MA0143.3	25	0	-	0	0	.
chr13	114276679	114276680	chr13:114276680:A:G	rs7991266	A	G	A	Sox2_MA0143.3	2	1	-	9.206767037375712	2.900948058900136	CCTTTGTC
chr14	16056532	16056533	chr14:16056533:G:C	rs1415066153	G	C	.	Sox2_MA0143.3	9	0	+	0	0	.
chr14	18646226	18646227	chr14:18646227:G:T	rs760176754	G	T	g	Sox2_MA0143.3	25	0	+	0	0	.
chr14	20144305	20144306	chr14:20144306:A:G	rs10131326	A	G	.	Sox2_MA0143.3	-4	0	+	0	0	.
chr14	20294615	20294616	chr14:20294616:G:T	rs10147548	G	T	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr14	20318950	20318951	chr14:20318951:A:C	rs28436942	A	C	C	Sox2_MA0143.3	3	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr14	20426173	20426174	chr14:20426174:C:T	rs1713451	C	T	C	Sox2_MA0143.3	23	0	-	0	0	.
chr14	20430282	20430283	chr14:20430283:C:T	rs11160645	C	T	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr14	20655782	20655783	chr14:20655783:A:T	rs189877085	A	T	A	Sox2_MA0143.3	-7	0	-	0	0	.
chr14	20673374	20673375	chr14:20673375:A:G	rs10136265	A	G	A	Sox2_MA0143.3	-6	0	+	0	0	.
chr14	20676639	20676640	chr14:20676640:C:G	rs10498273	C	G	C	Sox2_MA0143.3	24	0	-	0	0	.
chr14	20684735	20684736	chr14:20684736:T:C	rs117978329	T	C	T	Sox2_MA0143.3	19	0	+	0	0	.
chr14	20732683	20732684	chr14:20732684:A:G	rs60473234	A	G	G	Sox2_MA0143.3	22	0	+	0	0	.
chr14	20768791	20768792	chr14:20768792:C:G	rs764056	C	G	C	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr14	20782686	20782687	chr14:20782687:G:T	rs11622942	G	T	G	Sox2_MA0143.3	23	0	+	0	0	.
chr14	20794692	20794693	chr14:20794693:G:A	rs1957340	G	A	A	Sox2_MA0143.3	9	0	-	0	0	.
chr14	20826716	20826717	chr14:20826717:G:C	rs12590482	G	C	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr14	20998621	20998622	chr14:20998622:C:T	rs945352	C	T	C	Sox2_MA0143.3	13	0	+	0	0	.
chr14	21030894	21030895	chr14:21030895:G:A	rs1243459	G	A	A	Sox2_MA0143.3	11	0	+	0	0	.
chr14	21105100	21105101	chr14:21105101:G:A	rs4982409	G	A	A	Sox2_MA0143.3	10	0	-	0	0	.
chr14	21106417	21106418	chr14:21106418:A:T	rs56003716	A	T	A	Sox2_MA0143.3	11	0	-	0	0	.
chr14	21455841	21455842	chr14:21455842:C:T	rs192383699	C	T	C	Sox2_MA0143.3	19	0	-	0	0	.
chr14	21533812	21533813	chr14:21533813:C:T	rs2293702	C	T	C	Sox2_MA0143.3	-12	0	-	0	0	.
chr14	21704116	21704117	chr14:21704117:G:T	rs970315374	G	T	G	Sox2_MA0143.3	13	0	-	0	0	.
chr14	21704124	21704125	chr14:21704125:C:G	rs75952234	C	G	C	Sox2_MA0143.3	5	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr14	21866676	21866677	chr14:21866677:C:G	rs79455966	C	G	C	Sox2_MA0143.3	18	0	+	0	0	.
chr14	21914147	21914148	chr14:21914148:A:T	rs117040372	A	T	A	Sox2_MA0143.3	-14	0	+	0	0	.
chr14	21999446	21999447	chr14:21999447:A:G	rs55719414	A	G	A	Sox2_MA0143.3	-5	0	-	0	0	.
chr14	22172859	22172860	chr14:22172860:G:A	rs12434270	G	A	A	Sox2_MA0143.3	-18	0	+	0	0	.
chr14	22172892	22172893	chr14:22172893:G:T	rs12895135	G	T	G	Sox2_MA0143.3	15	0	+	0	0	.
chr14	22266388	22266389	chr14:22266389:G:A	rs6572346	G	A	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr14	22329351	22329352	chr14:22329352:T:C	rs17793833	T	C	C	Sox2_MA0143.3	12	0	-	0	0	.
chr14	22333610	22333611	chr14:22333611:G:A	rs28641040	G	A	G	Sox2_MA0143.3	12	0	+	0	0	.
chr14	22375499	22375500	chr14:22375500:T:G	chr14:22375500:T:G	T	G	T	Sox2_MA0143.3	-5	0	-	0	0	.
chr14	22389120	22389121	chr14:22389121:C:T	rs4982624	C	T	C	Sox2_MA0143.3	10	0	+	0	0	.
chr14	22389399	22389400	chr14:22389400:G:A	rs79545116	G	A	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr14	22427838	22427839	chr14:22427839:G:A	rs991595075	G	A	G	Sox2_MA0143.3	27	0	-	0	0	.
chr14	22427876	22427877	chr14:22427877:C:T	rs201162757	C	T	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr14	22429700	22429701	chr14:22429701:A:G	rs3811234	A	G	G	Sox2_MA0143.3	4	1	-	3.5547341015215945	-3.3540206777936254	CCTTTGTA
chr14	22506109	22506110	chr14:22506110:A:G	rs199804072	A	G	A	Sox2_MA0143.3	-10	0	+	0	0	.
chr14	22506121	22506122	chr14:22506122:A:G	rs3751468	A	G	G	Sox2_MA0143.3	2	1	+	9.613475778572903	3.494828071296623	CCATTGTT
chr14	22518290	22518291	chr14:22518291:C:T	rs2204993	C	T	C	Sox2_MA0143.3	1	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr14	22524577	22524578	chr14:22524578:A:C	rs227016	A	C	C	Sox2_MA0143.3	11	0	-	0	0	.
chr14	22526783	22526784	chr14:22526784:C:A	rs74038935	C	A	C	Sox2_MA0143.3	11	0	+	0	0	.
chr14	22537963	22537964	chr14:22537964:A:G	rs1154158	A	G	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr14	22557149	22557150	chr14:22557150:C:G	rs12888408	C	G	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr14	22578965	22578966	chr14:22578966:G:A	rs10145997	G	A	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr14	22645312	22645313	chr14:22645313:G:A	rs1681576	G	A	G	Sox2_MA0143.3	26	0	-	0	0	.
chr14	22748985	22748986	chr14:22748986:G:A	rs61974172	G	A	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr14	22808525	22808526	chr14:22808526:A:G	rs7146300	A	G	G	Sox2_MA0143.3	13	0	-	0	0	.
chr14	22808548	22808549	chr14:22808549:G:A	rs7144397	G	A	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr14	22836704	22836705	chr14:22836705:A:G	chr14:22836705:A:G	A	G	A	Sox2_MA0143.3	26	0	-	0	0	.
chr14	22849173	22849174	chr14:22849174:G:A	rs17879549	G	A	A	Sox2_MA0143.3	-11	0	-	0	0	.
chr14	22887310	22887311	chr14:22887311:G:A	rs45439396	G	A	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr14	22949826	22949827	chr14:22949827:C:T	rs2145542	C	T	C	Sox2_MA0143.3	9	0	-	0	0	.
chr14	23080075	23080076	chr14:23080076:G:A	rs3751501	G	A	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr14	23187671	23187672	chr14:23187672:C:A	rs761875	C	A	C	Sox2_MA0143.3	5	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr14	23261165	23261166	chr14:23261166:A:G	rs72488269	A	G	a	Sox2_MA0143.3	14	0	-	0	0	.
chr14	23412934	23412935	chr14:23412935:T:C	rs2284651	T	C	c	Sox2_MA0143.3	11	0	-	0	0	.
chr14	23448486	23448487	chr14:23448487:A:G	rs911390	A	G	A	Sox2_MA0143.3	-8	0	-	0	0	.
chr14	23514298	23514299	chr14:23514299:A:T	rs76595695	A	T	A	Sox2_MA0143.3	8	0	-	0	0	.
chr14	23547156	23547157	chr14:23547157:A:G	rs7145877	A	G	A	Sox2_MA0143.3	3	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr14	23649441	23649442	chr14:23649442:G:C	rs58518059	G	C	G	Sox2_MA0143.3	-14	0	+	0	0	.
chr14	23719396	23719397	chr14:23719397:C:T	rs10135915	C	T	C	Sox2_MA0143.3	24	0	+	0	0	.
chr14	23865797	23865798	chr14:23865798:T:C	rs182661385	T	C	T	Sox2_MA0143.3	27	0	+	0	0	.
chr14	23953156	23953157	chr14:23953157:A:G	rs10141091	A	G	G	Sox2_MA0143.3	8	0	+	0	0	.
chr14	24013091	24013092	chr14:24013092:G:A	rs578153809	G	A	-	Sox2_MA0143.3	14	0	-	0	0	.
chr14	24141714	24141715	chr14:24141715:C:T	rs1400021561	C	T	c	Sox2_MA0143.3	-13	0	+	0	0	.
chr14	24141748	24141749	chr14:24141749:A:T	rs528263724	A	T	a	Sox2_MA0143.3	21	0	+	0	0	.
chr14	24154981	24154982	chr14:24154982:G:A	rs11622031	G	A	G	Sox2_MA0143.3	23	0	+	0	0	.
chr14	24252806	24252807	chr14:24252807:A:G	rs1950494	A	G	G	Sox2_MA0143.3	19	0	+	0	0	.
chr14	24336617	24336618	chr14:24336618:C:T	rs3181251	C	T	C	Sox2_MA0143.3	14	0	-	0	0	.
chr14	24337593	24337594	chr14:24337594:G:C	rs1950501	G	C	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr14	24407857	24407858	chr14:24407858:A:G	rs77367832	A	G	A	Sox2_MA0143.3	2	1	+	8.676919043985553	2.5582713367092715	CCATTGTG
chr14	24425803	24425804	chr14:24425804:C:G	rs11845606	C	G	C	Sox2_MA0143.3	1	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr14	24439953	24439954	chr14:24439954:T:C	rs537217822	T	C	T	Sox2_MA0143.3	2	1	-	9.613475778572903	3.494828071296623	CCATTGTT
chr14	24644777	24644778	chr14:24644778:C:T	rs8013593	C	T	C	Sox2_MA0143.3	5	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr14	24662253	24662254	chr14:24662254:C:T	rs724023	C	T	T	Sox2_MA0143.3	-10	0	+	0	0	.
chr14	24689739	24689740	chr14:24689740:C:T	rs12435208	C	T	T	Sox2_MA0143.3	-17	0	-	0	0	.
chr14	24742014	24742015	chr14:24742015:C:T	rs10147455	C	T	C	Sox2_MA0143.3	0	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr14	24809449	24809450	chr14:24809450:T:G	rs17200568	T	G	T	Sox2_MA0143.3	8	0	+	0	0	.
chr14	24858335	24858336	chr14:24858336:A:G	rs854329	A	G	A	Sox2_MA0143.3	-11	0	-	0	0	.
chr14	24894704	24894705	chr14:24894705:T:C	rs1241598	T	C	C	Sox2_MA0143.3	13	0	-	0	0	.
chr14	24897957	24897958	chr14:24897958:T:A	rs12879796	T	A	A	Sox2_MA0143.3	-13	0	-	0	0	.
chr14	24938885	24938886	chr14:24938886:C:T	rs17109336	C	T	C	Sox2_MA0143.3	1	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr14	25056615	25056616	chr14:25056616:T:C	rs8004614	T	C	T	Sox2_MA0143.3	15	0	-	0	0	.
chr14	25104135	25104136	chr14:25104136:G:T	rs8019648	G	T	T	Sox2_MA0143.3	-11	0	+	0	0	.
chr14	25104136	25104137	chr14:25104137:G:T	rs77929902	G	T	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr14	25252931	25252932	chr14:25252932:C:T	rs760136857	C	T	C	Sox2_MA0143.3	17	0	+	0	0	.
chr14	25254341	25254342	chr14:25254342:A:G	rs7142193	A	G	A	Sox2_MA0143.3	-11	0	-	0	0	.
chr14	25312407	25312408	chr14:25312408:A:C	rs1241131	A	C	A	Sox2_MA0143.3	4	1	-	8.676919043985553	1.7681642646703322	CCATTGTG
chr14	25376370	25376371	chr14:25376371:G:A	rs1885121	G	A	A	Sox2_MA0143.3	-8	0	+	0	0	.
chr14	25661153	25661154	chr14:25661154:T:A	rs12432441	T	A	A	Sox2_MA0143.3	19	0	+	0	0	.
chr14	25832602	25832603	chr14:25832603:T:C	rs61982219	T	C	T	Sox2_MA0143.3	4	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr14	26129006	26129007	chr14:26129007:G:A	rs8181962	G	A	G	Sox2_MA0143.3	27	0	+	0	0	.
chr14	26171727	26171728	chr14:26171728:C:T	rs8007742	C	T	C	Sox2_MA0143.3	14	0	-	0	0	.
chr14	26248964	26248965	chr14:26248965:T:C	rs2224343	T	C	T	Sox2_MA0143.3	13	0	-	0	0	.
chr14	26286988	26286989	chr14:26286989:T:C	rs190913212	T	C	T	Sox2_MA0143.3	15	0	+	0	0	.
chr14	26377366	26377367	chr14:26377367:G:C	rs79890948	G	C	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr14	26400783	26400784	chr14:26400784:C:T	rs12893488	C	T	C	Sox2_MA0143.3	23	0	+	0	0	.
chr14	26553210	26553211	chr14:26553211:C:G	chr14:26553211:C:G	C	G	C	Sox2_MA0143.3	18	0	-	0	0	.
chr14	26605693	26605694	chr14:26605694:A:T	rs28402818	A	T	A	Sox2_MA0143.3	-6	0	+	0	0	.
chr14	26636625	26636626	chr14:26636626:T:G	rs1955816	T	G	T	Sox2_MA0143.3	-18	0	-	0	0	.
chr14	26765786	26765787	chr14:26765787:C:T	chr14:26765787:C:T	C	T	C	Sox2_MA0143.3	7	1	+	9.206767037375712	9.800647049772198	CCTTTGTC
chr14	26926793	26926794	chr14:26926794:C:T	rs7144507	C	T	C	Sox2_MA0143.3	22	0	-	0	0	.
chr14	27203796	27203797	chr14:27203797:G:A	rs140673324	G	A	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr14	27243146	27243147	chr14:27243147:G:A	rs1500439	G	A	A	Sox2_MA0143.3	21	0	-	0	0	.
chr14	27316955	27316956	chr14:27316956:T:C	rs1245794	T	C	C	Sox2_MA0143.3	10	0	+	0	0	.
chr14	27390527	27390528	chr14:27390528:C:T	rs4983242	C	T	C	Sox2_MA0143.3	5	1	-	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr14	27715662	27715663	chr14:27715663:T:C	rs1954527	T	C	T	Sox2_MA0143.3	2	1	-	9.019595766176417	2.900948058900136	CCATTGTC
chr14	27904004	27904005	chr14:27904005:T:C	rs10133545	T	C	T	Sox2_MA0143.3	18	0	+	0	0	.
chr14	27929282	27929283	chr14:27929283:C:A	rs17113237	C	A	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr14	28263331	28263332	chr14:28263332:G:T	rs28611269	G	T	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr14	28272174	28272175	chr14:28272175:T:G	rs2093992	T	G	G	Sox2_MA0143.3	22	0	+	0	0	.
chr14	28392074	28392075	chr14:28392075:G:A	rs10137562	G	A	A	Sox2_MA0143.3	26	0	+	0	0	.
chr14	28621773	28621774	chr14:28621774:T:A	rs10133204	T	A	T	Sox2_MA0143.3	-7	0	-	0	0	.
chr14	28766177	28766178	chr14:28766178:T:C	rs186650892	T	C	T	Sox2_MA0143.3	14	0	-	0	0	.
chr14	29216121	29216122	chr14:29216122:G:A	rs974471	G	A	A	Sox2_MA0143.3	16	0	-	0	0	.
chr14	29216149	29216150	chr14:29216150:C:T	rs76827779	C	T	C	Sox2_MA0143.3	-12	0	-	0	0	.
chr14	29339616	29339617	chr14:29339617:T:C	rs1391400275	T	C	T	Sox2_MA0143.3	7	1	-	3.5547341015215945	8.864090315184848	CCTTTGTA
chr14	29558531	29558532	chr14:29558532:G:A	rs911821	G	A	G	Sox2_MA0143.3	14	0	-	0	0	.
chr14	29655428	29655429	chr14:29655429:T:C	rs17115153	T	C	T	Sox2_MA0143.3	2	1	+	9.800647049772198	3.494828071296623	CCTTTGTT
chr14	29741986	29741987	chr14:29741987:A:G	rs190441661	A	G	A	Sox2_MA0143.3	11	0	+	0	0	.
chr14	29847735	29847736	chr14:29847736:T:C	rs10134670	T	C	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr14	29998029	29998030	chr14:29998030:C:T	rs1440987	C	T	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr14	30083877	30083878	chr14:30083878:T:C	rs225841	T	C	T	Sox2_MA0143.3	25	0	+	0	0	.
chr14	30228343	30228344	chr14:30228344:A:T	rs116242849	A	T	A	Sox2_MA0143.3	-14	0	-	0	0	.
chr14	30228440	30228441	chr14:30228441:T:C	rs9322851	T	C	T	Sox2_MA0143.3	3	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr14	30293423	30293424	chr14:30293424:G:A	rs34420038	G	A	G	Sox2_MA0143.3	27	0	+	0	0	.
chr14	30610776	30610777	chr14:30610777:T:C	rs229238	T	C	T	Sox2_MA0143.3	4	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr14	30610791	30610792	chr14:30610792:G:C	rs6571355	G	C	G	Sox2_MA0143.3	19	0	+	0	0	.
chr14	30756847	30756848	chr14:30756848:A:G	rs179550	A	G	G	Sox2_MA0143.3	15	0	-	0	0	.
chr14	30970671	30970672	chr14:30970672:C:G	rs4340230	C	G	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr14	30972430	30972431	chr14:30972431:C:T	rs56240895	C	T	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr14	31024246	31024247	chr14:31024247:T:C	rs144815797	T	C	T	Sox2_MA0143.3	-13	0	-	0	0	.
chr14	31069179	31069180	chr14:31069180:G:A	rs74877958	G	A	G	Sox2_MA0143.3	8	0	-	0	0	.
chr14	31207242	31207243	chr14:31207243:C:T	rs541354872	C	T	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr14	31241057	31241058	chr14:31241058:T:C	rs11626839	T	C	C	Sox2_MA0143.3	8	0	+	0	0	.
chr14	31426068	31426069	chr14:31426069:T:C	rs41496248	T	C	T	Sox2_MA0143.3	26	0	+	0	0	.
chr14	31458415	31458416	chr14:31458416:A:G	rs17097907	A	G	A	Sox2_MA0143.3	12	0	+	0	0	.
chr14	31597129	31597130	chr14:31597130:A:G	rs67468105	A	G	A	Sox2_MA0143.3	-11	0	+	0	0	.
chr14	31696450	31696451	chr14:31696451:C:T	rs12878022	C	T	C	Sox2_MA0143.3	17	0	+	0	0	.
chr14	31752116	31752117	chr14:31752117:G:A	rs67399055	G	A	g	Sox2_MA0143.3	-18	0	+	0	0	.
chr14	31785347	31785348	chr14:31785348:C:T	rs8009012	C	T	C	Sox2_MA0143.3	19	0	-	0	0	.
chr14	31788398	31788399	chr14:31788399:C:A	rs75915629	C	A	C	Sox2_MA0143.3	7	1	+	9.019595766176417	3.3675628303222993	CCATTGTC
chr14	31881164	31881165	chr14:31881165:G:A	rs10141540	G	A	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr14	31936461	31936462	chr14:31936462:G:A	rs2027098	G	A	A	Sox2_MA0143.3	-4	0	+	0	0	.
chr14	31961793	31961794	chr14:31961794:T:C	rs55830546	T	C	T	Sox2_MA0143.3	23	0	-	0	0	.
chr14	32027650	32027651	chr14:32027651:C:T	chr14:32027651:C:T	C	T	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr14	32078517	32078518	chr14:32078518:C:T	rs7152059	C	T	T	Sox2_MA0143.3	13	0	+	0	0	.
chr14	32303845	32303846	chr14:32303846:C:T	rs10872861	C	T	T	Sox2_MA0143.3	8	0	-	0	0	.
chr14	32333087	32333088	chr14:32333088:A:G	rs7151016	A	G	A	Sox2_MA0143.3	-20	0	+	0	0	.
chr14	32348716	32348717	chr14:32348717:T:C	rs7148036	T	C	t	Sox2_MA0143.3	4	1	+	8.676919043985553	1.7681642646703322	CCATTGTG
chr14	32414888	32414889	chr14:32414889:A:C	rs941742	A	C	A	Sox2_MA0143.3	-6	0	+	0	0	.
chr14	32507012	32507013	chr14:32507013:C:T	rs17412357	C	T	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr14	32508594	32508595	chr14:32508595:A:G	rs1001755752	A	G	A	Sox2_MA0143.3	10	0	-	0	0	.
chr14	32535434	32535435	chr14:32535435:A:G	rs3742925	A	G	A	Sox2_MA0143.3	-14	0	-	0	0	.
chr14	32545582	32545583	chr14:32545583:C:T	rs773613382	C	T	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr14	32584192	32584193	chr14:32584193:A:G	rs7145886	A	G	G	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr14	32614674	32614675	chr14:32614675:A:G	rs4981992	A	G	A	Sox2_MA0143.3	19	0	+	0	0	.
chr14	32644160	32644161	chr14:32644161:A:T	rs1033678	A	T	T	Sox2_MA0143.3	26	0	-	0	0	.
chr14	32695226	32695227	chr14:32695227:G:A	rs7156205	G	A	A	Sox2_MA0143.3	14	0	+	0	0	.
chr14	32902934	32902935	chr14:32902935:G:A	rs766299	G	A	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr14	32964696	32964697	chr14:32964697:G:A	rs2748836	G	A	A	Sox2_MA0143.3	-13	0	-	0	0	.
chr14	33068809	33068810	chr14:33068810:G:A	rs56345158	G	A	A	Sox2_MA0143.3	16	0	-	0	0	.
chr14	33068834	33068835	chr14:33068835:G:A	rs10146236	G	A	A	Sox2_MA0143.3	-9	0	-	0	0	.
chr14	33308195	33308196	chr14:33308196:G:A	rs4555053	G	A	G	Sox2_MA0143.3	25	0	-	0	0	.
chr14	33348682	33348683	chr14:33348683:A:G	rs1478574687	A	G	A	Sox2_MA0143.3	22	0	+	0	0	.
chr14	33510037	33510038	chr14:33510038:A:G	rs139840206	A	G	A	Sox2_MA0143.3	25	0	-	0	0	.
chr14	33553626	33553627	chr14:33553627:T:C	rs10142154	T	C	T	Sox2_MA0143.3	19	0	+	0	0	.
chr14	33642437	33642438	chr14:33642438:G:C	chr14:33642438:G:C	G	C	G	Sox2_MA0143.3	16	0	-	0	0	.
chr14	33718270	33718271	chr14:33718271:A:G	rs6571610	A	G	G	Sox2_MA0143.3	-2	0	+	0	0	.
chr14	33836876	33836877	chr14:33836877:C:G	rs10130665	C	G	G	Sox2_MA0143.3	5	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr14	33838513	33838514	chr14:33838514:T:C	rs9322929	T	C	T	Sox2_MA0143.3	12	0	-	0	0	.
chr14	34022025	34022026	chr14:34022026:T:C	rs34912702	T	C	T	Sox2_MA0143.3	14	0	+	0	0	.
chr14	34030471	34030472	chr14:34030472:A:G	rs553578253	A	G	A	Sox2_MA0143.3	-7	0	-	0	0	.
chr14	34080389	34080390	chr14:34080390:A:T	rs1482545	A	T	A	Sox2_MA0143.3	16	0	-	0	0	.
chr14	34081175	34081176	chr14:34081176:C:G	rs4981219	C	G	G	Sox2_MA0143.3	-16	0	-	0	0	.
chr14	34099895	34099896	chr14:34099896:C:T	rs28502494	C	T	T	Sox2_MA0143.3	-19	0	+	0	0	.
chr14	34131221	34131222	chr14:34131222:G:A	rs78817937	G	A	G	Sox2_MA0143.3	5	1	+	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr14	34184089	34184090	chr14:34184090:C:T	rs10148562	C	T	C	Sox2_MA0143.3	15	0	-	0	0	.
chr14	34237112	34237113	chr14:34237113:C:T	rs1888100	C	T	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr14	34250988	34250989	chr14:34250989:A:G	rs9805973	A	G	G	Sox2_MA0143.3	10	0	+	0	0	.
chr14	34256683	34256684	chr14:34256684:T:A	rs10143917	T	A	T	Sox2_MA0143.3	2	1	-	9.019595766176417	9.206767037375712	CCATTGTC
chr14	34302789	34302790	chr14:34302790:G:C	rs145927046	G	C	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr14	34348713	34348714	chr14:34348714:G:C	rs114894190	G	C	g	Sox2_MA0143.3	1	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr14	34375169	34375170	chr14:34375170:T:C	rs1958589	T	C	T	Sox2_MA0143.3	2	1	-	8.676919043985553	2.5582713367092715	CCATTGTG
chr14	34379760	34379761	chr14:34379761:G:A	rs962688556	G	A	G	Sox2_MA0143.3	14	0	-	0	0	.
chr14	34379770	34379771	chr14:34379771:A:T	rs10150318	A	T	T	Sox2_MA0143.3	4	1	-	9.206767037375712	2.2980122580604916	CCTTTGTC
chr14	34379771	34379772	chr14:34379772:A:G	rs12436932	A	G	A	Sox2_MA0143.3	3	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr14	34379791	34379792	chr14:34379792:C:T	rs79957866	C	T	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr14	34491518	34491519	chr14:34491519:C:G	rs28475493	C	G	C	Sox2_MA0143.3	23	0	+	0	0	.
chr14	34497462	34497463	chr14:34497463:T:A	rs10137076	T	A	T	Sox2_MA0143.3	-17	0	+	0	0	.
chr14	34505509	34505510	chr14:34505510:C:A	rs7148589	C	A	A	Sox2_MA0143.3	14	0	-	0	0	.
chr14	34663480	34663481	chr14:34663481:T:G	rs8009551	T	G	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr14	34781942	34781943	chr14:34781943:G:C	rs76124700	G	C	G	Sox2_MA0143.3	24	0	+	0	0	.
chr14	34861686	34861687	chr14:34861687:G:A	rs1200414	G	A	G	Sox2_MA0143.3	22	0	-	0	0	.
chr14	34875172	34875173	chr14:34875173:C:T	rs748391346	C	T	C	Sox2_MA0143.3	11	0	-	0	0	.
chr14	35061363	35061364	chr14:35061364:T:G	rs192127535	T	G	t	Sox2_MA0143.3	23	0	-	0	0	.
chr14	35337256	35337257	chr14:35337257:G:A	rs28436727	G	A	G	Sox2_MA0143.3	-16	0	-	0	0	.
chr14	35342307	35342308	chr14:35342308:G:A	rs116232289	G	A	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr14	35360907	35360908	chr14:35360908:G:T	rs10140922	G	T	G	Sox2_MA0143.3	22	0	+	0	0	.
chr14	35385157	35385158	chr14:35385158:G:C	rs34150541	G	C	G	Sox2_MA0143.3	5	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr14	35389449	35389450	chr14:35389450:C:T	rs73242919	C	T	C	Sox2_MA0143.3	9	0	-	0	0	.
chr14	35406564	35406565	chr14:35406565:G:T	rs7157810	G	T	G	Sox2_MA0143.3	11	0	+	0	0	.
chr14	35530663	35530664	chr14:35530664:G:A	rs1958258	G	A	G	Sox2_MA0143.3	0	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr14	35578790	35578791	chr14:35578791:T:C	rs4982292	T	C	T	Sox2_MA0143.3	-19	0	-	0	0	.
chr14	35993026	35993027	chr14:35993027:G:C	rs150224844	G	C	G	Sox2_MA0143.3	24	0	-	0	0	.
chr14	36238972	36238973	chr14:36238973:T:C	rs1766147	T	C	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr14	36239018	36239019	chr14:36239019:G:A	rs1766148	G	A	G	Sox2_MA0143.3	5	1	+	9.613475778572903	2.7047209992576837	CCATTGTT
chr14	36707935	36707936	chr14:36707936:G:A	rs181572828	G	A	G	Sox2_MA0143.3	9	0	-	0	0	.
chr14	36771385	36771386	chr14:36771386:G:A	rs712329	G	A	A	Sox2_MA0143.3	-19	0	+	0	0	.
chr14	37019084	37019085	chr14:37019085:G:A	rs10140373	G	A	A	Sox2_MA0143.3	-8	0	-	0	0	.
chr14	37038929	37038930	chr14:37038930:T:C	rs1467486	T	C	C	Sox2_MA0143.3	20	0	-	0	0	.
chr14	37048122	37048123	chr14:37048123:T:C	rs75700775	T	C	T	Sox2_MA0143.3	21	0	+	0	0	.
chr14	37131524	37131525	chr14:37131525:C:T	rs117496866	C	T	C	Sox2_MA0143.3	25	0	+	0	0	.
chr14	37240461	37240462	chr14:37240462:G:A	rs149217672	G	A	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr14	37772854	37772855	chr14:37772855:A:C	rs61977138	A	C	A	Sox2_MA0143.3	-4	0	-	0	0	.
chr14	37874524	37874525	chr14:37874525:C:T	rs1330324080	C	T	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr14	37874545	37874546	chr14:37874546:A:T	rs79701036	A	T	A	Sox2_MA0143.3	17	0	+	0	0	.
chr14	38117553	38117554	chr14:38117554:G:T	rs7148351	G	T	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr14	38319692	38319693	chr14:38319693:T:C	rs13353118	T	C	T	Sox2_MA0143.3	-20	0	+	0	0	.
chr14	38705510	38705511	chr14:38705511:G:A	rs12586775	G	A	A	Sox2_MA0143.3	22	0	+	0	0	.
chr14	38866745	38866746	chr14:38866746:C:T	rs8004103	C	T	T	Sox2_MA0143.3	7	1	-	8.864090315184848	3.5547341015215945	CCTTTGTG
chr14	38867779	38867780	chr14:38867780:G:A	rs2064958	G	A	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr14	38881004	38881005	chr14:38881005:T:C	rs1157404794	T	C	T	Sox2_MA0143.3	22	0	+	0	0	.
chr14	38899151	38899152	chr14:38899152:G:A	rs17401680	G	A	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr14	39115110	39115111	chr14:39115111:C:A	rs78040070	C	A	C	Sox2_MA0143.3	0	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr14	39169423	39169424	chr14:39169424:T:G	rs4143954	T	G	T	Sox2_MA0143.3	12	0	+	0	0	.
chr14	39175113	39175114	chr14:39175114:A:G	rs546463276	A	G	A	Sox2_MA0143.3	6	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr14	39175136	39175137	chr14:39175137:C:A	rs189895920	C	A	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr14	39265895	39265896	chr14:39265896:A:C	rs17109079	A	C	A	Sox2_MA0143.3	4	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr14	39265899	39265900	chr14:39265900:G:C	rs12587713	G	C	G	Sox2_MA0143.3	0	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr14	39291893	39291894	chr14:39291894:A:G	rs117225577	A	G	A	Sox2_MA0143.3	-1	0	-	0	0	.
chr14	39348823	39348824	chr14:39348824:A:G	rs1140952	A	G	A	Sox2_MA0143.3	-9	0	+	0	0	.
chr14	39396559	39396560	chr14:39396560:G:T	rs2274395	G	T	G	Sox2_MA0143.3	-3	0	-	0	0	.
chr14	39396571	39396572	chr14:39396572:T:A	rs61611234	T	A	T	Sox2_MA0143.3	-15	0	-	0	0	.
chr14	39441964	39441965	chr14:39441965:C:A	rs910371	C	A	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr14	39447530	39447531	chr14:39447531:A:C	rs10083310	A	C	A	Sox2_MA0143.3	11	0	+	0	0	.
chr14	39873741	39873742	chr14:39873742:G:A	rs112569498	G	A	G	Sox2_MA0143.3	13	0	-	0	0	.
chr14	39878152	39878153	chr14:39878153:G:A	rs1957197	G	A	A	Sox2_MA0143.3	-17	0	+	0	0	.
chr14	39878176	39878177	chr14:39878177:T:C	rs1957196	T	C	T	Sox2_MA0143.3	7	1	+	9.613475778572903	9.019595766176417	CCATTGTT
chr14	39894395	39894396	chr14:39894396:C:T	rs8005921	C	T	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr14	39981135	39981136	chr14:39981136:A:G	rs12323591	A	G	G	Sox2_MA0143.3	9	0	+	0	0	.
chr14	40055300	40055301	chr14:40055301:C:G	rs17110201	C	G	T	Sox2_MA0143.3	-18	0	-	0	0	.
chr14	40055300	40055301	chr14:40055301:C:T	chr14:40055301:C:T	C	T	T	Sox2_MA0143.3	-18	0	-	0	0	.
chr14	40130033	40130034	chr14:40130034:T:C	rs75657507	T	C	T	Sox2_MA0143.3	6	1	+	9.613475778572903	2.7047209992576837	CCATTGTT
chr14	40418047	40418048	chr14:40418048:T:C	rs7142594	T	C	C	Sox2_MA0143.3	7	1	+	9.613475778572903	9.019595766176417	CCATTGTT
chr14	40490634	40490635	chr14:40490635:G:A	rs73300401	G	A	G	Sox2_MA0143.3	-12	0	+	0	0	.
chr14	40694662	40694663	chr14:40694663:T:C	rs7149438	T	C	c	Sox2_MA0143.3	-18	0	-	0	0	.
chr14	40734910	40734911	chr14:40734911:G:C	rs1349122	G	C	C	Sox2_MA0143.3	5	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr14	41030633	41030634	chr14:41030634:A:G	rs12885616	A	G	A	Sox2_MA0143.3	3	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr14	41037804	41037805	chr14:41037805:C:T	rs75137829	C	T	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr14	41060922	41060923	chr14:41060923:G:T	rs2799785	G	T	G	Sox2_MA0143.3	0	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr14	41070536	41070537	chr14:41070537:A:G	rs4420438	A	G	A	Sox2_MA0143.3	19	0	+	0	0	.
chr14	41411523	41411524	chr14:41411524:G:A	rs7143605	G	A	A	Sox2_MA0143.3	-18	0	+	0	0	.
chr14	41825585	41825586	chr14:41825586:C:G	rs8006828	C	G	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr14	41900901	41900902	chr14:41900902:G:A	chr14:41900902:G:A	G	A	G	Sox2_MA0143.3	-9	0	+	0	0	.
chr14	42109918	42109919	chr14:42109919:T:A	rs1763255	T	A	t	Sox2_MA0143.3	-5	0	+	0	0	.
chr14	42113398	42113399	chr14:42113399:A:C	rs1684713	A	C	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr14	42174768	42174769	chr14:42174769:G:T	rs61991046	G	T	G	Sox2_MA0143.3	1	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr14	42174776	42174777	chr14:42174777:G:A	rs61991047	G	A	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr14	42274234	42274235	chr14:42274235:G:T	rs2415721	G	T	G	Sox2_MA0143.3	21	0	-	0	0	.
chr14	42379405	42379406	chr14:42379406:C:T	rs2626834	C	T	T	Sox2_MA0143.3	-18	0	-	0	0	.
chr14	42475303	42475304	chr14:42475304:C:T	rs12323415	C	T	C	Sox2_MA0143.3	22	0	-	0	0	.
chr14	42569263	42569264	chr14:42569264:G:C	rs12898123	G	C	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr14	42734715	42734716	chr14:42734716:T:G	rs10145477	T	G	T	Sox2_MA0143.3	25	0	+	0	0	.
chr14	43059102	43059103	chr14:43059103:G:A	rs117348140	G	A	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr14	43143160	43143161	chr14:43143161:G:T	rs35592289	G	T	G	Sox2_MA0143.3	23	0	-	0	0	.
chr14	43407691	43407692	chr14:43407692:G:T	rs974953	G	T	G	Sox2_MA0143.3	24	0	+	0	0	.
chr14	43434219	43434220	chr14:43434220:T:C	rs2172638	T	C	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr14	44109205	44109206	chr14:44109206:C:T	rs35630300	C	T	C	Sox2_MA0143.3	14	0	-	0	0	.
chr14	44455857	44455858	chr14:44455858:T:C	rs72687023	T	C	T	Sox2_MA0143.3	2	1	-	9.613475778572903	3.494828071296623	CCATTGTT
chr14	44700591	44700592	chr14:44700592:G:T	rs117089295	G	T	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr14	44701995	44701996	chr14:44701996:G:A	rs1345980	G	A	G	Sox2_MA0143.3	16	0	-	0	0	.
chr14	44964650	44964651	chr14:44964651:G:A	rs73346351	G	A	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr14	45038411	45038412	chr14:45038412:G:A	rs60891427	G	A	A	Sox2_MA0143.3	-19	0	-	0	0	.
chr14	45135648	45135649	chr14:45135649:T:C	rs149907045	T	C	T	Sox2_MA0143.3	21	0	+	0	0	.
chr14	45150585	45150586	chr14:45150586:C:T	rs77142566	C	T	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr14	45839108	45839109	chr14:45839109:G:A	rs114649849	G	A	G	Sox2_MA0143.3	18	0	+	0	0	.
chr14	45878359	45878360	chr14:45878360:C:A	rs60275600	C	A	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr14	45916520	45916521	chr14:45916521:T:C	rs72621076	T	C	T	Sox2_MA0143.3	20	0	-	0	0	.
chr14	46195645	46195646	chr14:46195646:A:G	rs858868	A	G	G	Sox2_MA0143.3	13	0	-	0	0	.
chr14	46405747	46405748	chr14:46405748:C:T	rs144742422	C	T	C	Sox2_MA0143.3	0	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr14	46501100	46501101	chr14:46501101:T:C	rs1494092	T	C	T	Sox2_MA0143.3	-19	0	-	0	0	.
chr14	46907998	46907999	chr14:46907999:G:T	rs3007113	G	T	T	Sox2_MA0143.3	-7	0	+	0	0	.
chr14	47112059	47112060	chr14:47112060:G:T	rs12588192	G	T	T	Sox2_MA0143.3	1	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr14	47227021	47227022	chr14:47227022:G:A	rs74675056	G	A	G	Sox2_MA0143.3	-9	0	+	0	0	.
chr14	47263079	47263080	chr14:47263080:G:A	rs17118256	G	A	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr14	47286608	47286609	chr14:47286609:T:C	rs72680299	T	C	C	Sox2_MA0143.3	19	0	+	0	0	.
chr14	48173907	48173908	chr14:48173908:T:C	rs41320346	T	C	T	Sox2_MA0143.3	-17	0	-	0	0	.
chr14	48584239	48584240	chr14:48584240:C:T	rs2416180	C	T	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr14	48645031	48645032	chr14:48645032:C:A	rs56242697	C	A	A	Sox2_MA0143.3	-16	0	+	0	0	.
chr14	48747890	48747891	chr14:48747891:G:A	rs25395	G	A	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr14	48850163	48850164	chr14:48850164:G:A	rs4566066	G	A	G	Sox2_MA0143.3	1	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr14	49014842	49014843	chr14:49014843:G:A	rs10150131	G	A	G	Sox2_MA0143.3	23	0	+	0	0	.
chr14	49042068	49042069	chr14:49042069:C:A	rs1956096	C	A	A	Sox2_MA0143.3	17	0	-	0	0	.
chr14	49150857	49150858	chr14:49150858:C:T	rs74048489	C	T	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr14	49261593	49261594	chr14:49261594:G:A	rs4898616	G	A	G	Sox2_MA0143.3	12	0	+	0	0	.
chr14	49315615	49315616	chr14:49315616:G:A	rs7140387	G	A	A	Sox2_MA0143.3	8	0	-	0	0	.
chr14	49403337	49403338	chr14:49403338:G:A	rs141071182	G	A	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr14	49527431	49527432	chr14:49527432:C:T	rs12892104	C	T	C	Sox2_MA0143.3	-20	0	-	0	0	.
chr14	49552022	49552023	chr14:49552023:G:T	rs4900927	G	T	T	Sox2_MA0143.3	7	1	+	8.864090315184848	9.800647049772198	CCTTTGTG
chr14	49621366	49621367	chr14:49621367:G:T	rs140584714	G	T	G	Sox2_MA0143.3	-3	0	-	0	0	.
chr14	49633565	49633566	chr14:49633566:A:T	rs144077436	A	T	A	Sox2_MA0143.3	26	0	-	0	0	.
chr14	49884723	49884724	chr14:49884724:T:A	rs3100920	T	A	T	Sox2_MA0143.3	12	0	+	0	0	.
chr14	49934385	49934386	chr14:49934386:T:C	rs1884625	T	C	T	Sox2_MA0143.3	24	0	+	0	0	.
chr14	49988644	49988645	chr14:49988645:A:C	rs10131496	A	C	A	Sox2_MA0143.3	3	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr14	50028024	50028025	chr14:50028025:A:G	rs12437060	A	G	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr14	50092144	50092145	chr14:50092145:T:C	rs999693	T	C	C	Sox2_MA0143.3	22	0	-	0	0	.
chr14	50117103	50117104	chr14:50117104:T:C	rs76978190	T	C	T	Sox2_MA0143.3	13	0	+	0	0	.
chr14	50200583	50200584	chr14:50200584:T:C	rs1026293454	T	C	T	Sox2_MA0143.3	-19	0	-	0	0	.
chr14	50215418	50215419	chr14:50215419:C:G	rs117294554	C	G	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr14	50231604	50231605	chr14:50231605:G:T	rs900874195	G	T	G	Sox2_MA0143.3	11	0	+	0	0	.
chr14	50231611	50231612	chr14:50231612:G:A	rs1161716113	G	A	G	Sox2_MA0143.3	18	0	+	0	0	.
chr14	50389662	50389663	chr14:50389663:T:C	rs73277671	T	C	T	Sox2_MA0143.3	-11	0	-	0	0	.
chr14	50530012	50530013	chr14:50530013:G:C	rs2883948	G	C	G	Sox2_MA0143.3	8	0	-	0	0	.
chr14	50533176	50533177	chr14:50533177:C:T	rs117456725	C	T	C	Sox2_MA0143.3	0	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr14	50658337	50658338	chr14:50658338:G:C	rs115349896	G	C	G	Sox2_MA0143.3	0	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr14	50667290	50667291	chr14:50667291:C:A	rs10135282	C	A	C	Sox2_MA0143.3	12	0	-	0	0	.
chr14	50667319	50667320	chr14:50667320:C:G	rs45479904	C	G	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr14	50675886	50675887	chr14:50675887:G:A	rs7147956	G	A	G	Sox2_MA0143.3	5	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr14	50704535	50704536	chr14:50704536:C:G	rs12878510	C	G	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr14	50783964	50783965	chr14:50783965:G:A	rs79197422	G	A	G	Sox2_MA0143.3	11	0	-	0	0	.
chr14	50830401	50830402	chr14:50830402:C:A	rs1046017837	C	A	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr14	50830424	50830425	chr14:50830425:C:G	rs185012890	C	G	C	Sox2_MA0143.3	12	0	+	0	0	.
chr14	50860310	50860311	chr14:50860311:G:A	chr14:50860311:G:A	G	A	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr14	50920673	50920674	chr14:50920674:G:C	chr14:50920674:G:C	G	C	G	Sox2_MA0143.3	11	0	+	0	0	.
chr14	50924537	50924538	chr14:50924538:A:G	rs6572711	A	G	G	Sox2_MA0143.3	2	1	-	8.864090315184848	2.5582713367092715	CCTTTGTG
chr14	50985193	50985194	chr14:50985194:T:A	rs1959533	T	A	T	Sox2_MA0143.3	-17	0	-	0	0	.
chr14	51003419	51003420	chr14:51003420:T:G	rs10483606	T	G	T	Sox2_MA0143.3	19	0	+	0	0	.
chr14	51035611	51035612	chr14:51035612:C:T	rs78326232	C	T	C	Sox2_MA0143.3	-5	0	-	0	0	.
chr14	51083916	51083917	chr14:51083917:G:C	rs72687170	G	C	G	Sox2_MA0143.3	24	0	+	0	0	.
chr14	51262768	51262769	chr14:51262769:A:G	rs4566067	A	G	G	Sox2_MA0143.3	20	0	+	0	0	.
chr14	51278149	51278150	chr14:51278150:A:G	rs72622442	A	G	G	Sox2_MA0143.3	13	0	-	0	0	.
chr14	51395290	51395291	chr14:51395291:C:T	chr14:51395291:C:T	C	T	C	Sox2_MA0143.3	12	0	+	0	0	.
chr14	51395299	51395300	chr14:51395300:G:T	rs143705731	G	T	G	Sox2_MA0143.3	21	0	+	0	0	.
chr14	51444499	51444500	chr14:51444500:A:G	rs7146882	A	G	A	Sox2_MA0143.3	2	1	+	9.613475778572903	3.494828071296623	CCATTGTT
chr14	51458088	51458089	chr14:51458089:T:A	rs8015513	T	A	T	Sox2_MA0143.3	-10	0	+	0	0	.
chr14	51458111	51458112	chr14:51458112:A:C	rs17252441	A	C	A	Sox2_MA0143.3	13	0	+	0	0	.
chr14	51517472	51517473	chr14:51517473:A:G	rs17124067	A	G	A	Sox2_MA0143.3	25	0	+	0	0	.
chr14	51519967	51519968	chr14:51519968:T:C	rs1950917	T	C	T	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr14	51556046	51556047	chr14:51556047:T:C	rs17586050	T	C	T	Sox2_MA0143.3	-19	0	+	0	0	.
chr14	51566217	51566218	chr14:51566218:A:G	rs61969803	A	G	A	Sox2_MA0143.3	6	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr14	51634512	51634513	chr14:51634513:G:C	rs17589730	G	C	g	Sox2_MA0143.3	-13	0	+	0	0	.
chr14	51718420	51718421	chr14:51718421:G:A	rs881472	G	A	A	Sox2_MA0143.3	24	0	-	0	0	.
chr14	51758077	51758078	chr14:51758078:C:A	rs61970664	C	A	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr14	51758078	51758079	chr14:51758079:C:T	rs72474168	C	T	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr14	51758152	51758153	chr14:51758153:T:C	rs3923816	T	C	T	Sox2_MA0143.3	6	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr14	51866399	51866400	chr14:51866400:G:A	rs8005555	G	A	A	Sox2_MA0143.3	5	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr14	51873955	51873956	chr14:51873956:G:A	rs34468044	G	A	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr14	51873958	51873959	chr14:51873959:A:G	rs79706126	A	G	A	Sox2_MA0143.3	-20	0	-	0	0	.
chr14	51996434	51996435	chr14:51996435:C:T	rs1253682	C	T	T	Sox2_MA0143.3	23	0	+	0	0	.
chr14	52021140	52021141	chr14:52021141:C:T	rs568566958	C	T	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr14	52026094	52026095	chr14:52026095:T:A	rs141482866	T	A	T	Sox2_MA0143.3	-14	0	+	0	0	.
chr14	52031509	52031510	chr14:52031510:C:T	rs12878555	C	T	C	Sox2_MA0143.3	13	0	-	0	0	.
chr14	52032319	52032320	chr14:52032320:G:A	rs941622	G	A	G	Sox2_MA0143.3	1	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr14	52052092	52052093	chr14:52052093:G:A	rs730532	G	A	A	Sox2_MA0143.3	-16	0	+	0	0	.
chr14	52075348	52075349	chr14:52075349:C:T	rs12897646	C	T	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr14	52081403	52081404	chr14:52081404:C:A	rs941626	C	A	A	Sox2_MA0143.3	5	1	-	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr14	52112335	52112336	chr14:52112336:T:C	rs71422055	T	C	T	Sox2_MA0143.3	13	0	-	0	0	.
chr14	52172058	52172059	chr14:52172059:C:T	rs148845853	C	T	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr14	52172098	52172099	chr14:52172099:G:T	rs35016963	G	T	G	Sox2_MA0143.3	25	0	+	0	0	.
chr14	52221226	52221227	chr14:52221227:C:T	rs150292814	C	T	C	Sox2_MA0143.3	11	0	-	0	0	.
chr14	52241308	52241309	chr14:52241309:C:T	rs58662169	C	T	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr14	52378247	52378248	chr14:52378248:A:G	rs7151722	A	G	A	Sox2_MA0143.3	-4	0	+	0	0	.
chr14	52392070	52392071	chr14:52392071:C:T	rs187478236	C	T	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr14	52400877	52400878	chr14:52400878:C:T	rs1353409	C	T	T	Sox2_MA0143.3	14	0	-	0	0	.
chr14	52596544	52596545	chr14:52596545:C:A	rs113791958	C	A	c	Sox2_MA0143.3	-16	0	-	0	0	.
chr14	52609851	52609852	chr14:52609852:A:G	rs117790841	A	G	A	Sox2_MA0143.3	-2	0	-	0	0	.
chr14	52686452	52686453	chr14:52686453:C:T	rs35800716	C	T	C	Sox2_MA0143.3	12	0	-	0	0	.
chr14	52691607	52691608	chr14:52691608:C:T	rs2357804	C	T	C	Sox2_MA0143.3	17	0	+	0	0	.
chr14	52710873	52710874	chr14:52710874:A:G	rs79376380	A	G	A	Sox2_MA0143.3	24	0	-	0	0	.
chr14	52988638	52988639	chr14:52988639:G:C	rs8009372	G	C	G	Sox2_MA0143.3	11	0	-	0	0	.
chr14	53015934	53015935	chr14:53015935:A:C	rs62005730	A	C	a	Sox2_MA0143.3	-5	0	+	0	0	.
chr14	53041300	53041301	chr14:53041301:T:C	rs17126073	T	C	T	Sox2_MA0143.3	27	0	-	0	0	.
chr14	53143503	53143504	chr14:53143504:T:C	rs10145557	T	C	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr14	53146987	53146988	chr14:53146988:C:T	rs10873068	C	T	T	Sox2_MA0143.3	13	0	-	0	0	.
chr14	53154488	53154489	chr14:53154489:G:A	rs996264	G	A	G	Sox2_MA0143.3	-3	0	+	0	0	.
chr14	53182042	53182043	chr14:53182043:A:G	rs79384599	A	G	A	Sox2_MA0143.3	-14	0	-	0	0	.
chr14	53233622	53233623	chr14:53233623:C:T	rs11157957	C	T	C	Sox2_MA0143.3	-20	0	-	0	0	.
chr14	53237645	53237646	chr14:53237646:T:G	rs143563739	T	G	T	Sox2_MA0143.3	-2	0	-	0	0	.
chr14	53238416	53238417	chr14:53238417:C:T	rs1966526	C	T	T	Sox2_MA0143.3	18	0	+	0	0	.
chr14	53356875	53356876	chr14:53356876:G:A	rs1262210	G	A	A	Sox2_MA0143.3	-1	0	-	0	0	.
chr14	53385584	53385585	chr14:53385585:G:A	rs6572907	G	A	A	Sox2_MA0143.3	12	0	-	0	0	.
chr14	53473981	53473982	chr14:53473982:G:A	rs1954308	G	A	A	Sox2_MA0143.3	-18	0	+	0	0	.
chr14	53679011	53679012	chr14:53679012:A:T	rs17126757	A	T	A	Sox2_MA0143.3	-16	0	+	0	0	.
chr14	53747292	53747293	chr14:53747293:C:T	rs1888345	C	T	C	Sox2_MA0143.3	5	1	-	9.613475778572903	2.7047209992576837	CCATTGTT
chr14	53768487	53768488	chr14:53768488:C:A	chr14:53768488:C:A	C	A	C	Sox2_MA0143.3	17	0	-	0	0	.
chr14	53768488	53768489	chr14:53768489:A:C	chr14:53768489:A:C	A	C	A	Sox2_MA0143.3	16	0	-	0	0	.
chr14	53888474	53888475	chr14:53888475:G:C	rs17127031	G	C	G	Sox2_MA0143.3	-12	0	+	0	0	.
chr14	53963966	53963967	chr14:53963967:G:T	rs28662470	G	T	G	Sox2_MA0143.3	9	0	-	0	0	.
chr14	54084785	54084786	chr14:54084786:T:A	rs11621397	T	A	T	Sox2_MA0143.3	-2	0	+	0	0	.
chr14	54114561	54114562	chr14:54114562:C:A	rs927498	C	A	C	Sox2_MA0143.3	25	0	-	0	0	.
chr14	54204460	54204461	chr14:54204461:G:C	rs4898832	G	C	-	Sox2_MA0143.3	-20	0	-	0	0	.
chr14	54310720	54310721	chr14:54310721:C:T	rs4508354	C	T	C	Sox2_MA0143.3	23	0	-	0	0	.
chr14	54328444	54328445	chr14:54328445:C:T	rs10151748	C	T	T	Sox2_MA0143.3	-17	0	+	0	0	.
chr14	54347331	54347332	chr14:54347332:G:A	rs117908503	G	A	G	Sox2_MA0143.3	9	0	-	0	0	.
chr14	54353994	54353995	chr14:54353995:A:C	rs61985444	A	C	A	Sox2_MA0143.3	8	0	-	0	0	.
chr14	54368827	54368828	chr14:54368828:A:G	rs4901508	A	G	A	Sox2_MA0143.3	-6	0	+	0	0	.
chr14	54600706	54600707	chr14:54600707:G:T	rs139953814	G	T	G	Sox2_MA0143.3	18	0	+	0	0	.
chr14	54606413	54606414	chr14:54606414:T:C	rs936066031	T	C	T	Sox2_MA0143.3	-20	0	+	0	0	.
chr14	54606425	54606426	chr14:54606426:C:T	rs17253494	C	T	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr14	54743118	54743119	chr14:54743119:C:T	rs17127863	C	T	C	Sox2_MA0143.3	24	0	+	0	0	.
chr14	54775526	54775527	chr14:54775527:T:G	rs17127934	T	G	T	Sox2_MA0143.3	19	0	+	0	0	.
chr14	54797142	54797143	chr14:54797143:T:C	rs7148657	T	C	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr14	54814262	54814263	chr14:54814263:G:T	rs7161374	G	T	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr14	54840085	54840086	chr14:54840086:C:A	rs7142517	C	A	C	Sox2_MA0143.3	10	0	+	0	0	.
chr14	55052184	55052185	chr14:55052185:C:A	chr14:55052185:C:A	C	A	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr14	55052184	55052185	chr14:55052185:C:T	rs61975399	C	T	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr14	55078103	55078104	chr14:55078104:G:A	rs72716646	G	A	G	Sox2_MA0143.3	24	0	-	0	0	.
chr14	55102164	55102165	chr14:55102165:T:C	rs116423396	T	C	T	Sox2_MA0143.3	16	0	+	0	0	.
chr14	55120578	55120579	chr14:55120579:T:C	rs61508494	T	C	C	Sox2_MA0143.3	14	0	+	0	0	.
chr14	55328486	55328487	chr14:55328487:C:T	rs76510038	C	T	C	Sox2_MA0143.3	20	0	-	0	0	.
chr14	55546465	55546466	chr14:55546466:T:C	rs4901588	T	C	T	Sox2_MA0143.3	18	0	-	0	0	.
chr14	55588727	55588728	chr14:55588728:C:T	rs4901592	C	T	C	Sox2_MA0143.3	16	0	+	0	0	.
chr14	55699319	55699320	chr14:55699320:C:T	rs76205307	C	T	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr14	55707756	55707757	chr14:55707757:A:G	rs1169759462	A	G	A	Sox2_MA0143.3	-5	0	-	0	0	.
chr14	55712400	55712401	chr14:55712401:G:A	rs28537145	G	A	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr14	55740646	55740647	chr14:55740647:C:T	rs7150381	C	T	T	Sox2_MA0143.3	-7	0	-	0	0	.
chr14	55745412	55745413	chr14:55745413:C:T	rs4901598	C	T	T	Sox2_MA0143.3	17	0	+	0	0	.
chr14	55756002	55756003	chr14:55756003:A:G	rs10149261	A	G	G	Sox2_MA0143.3	14	0	+	0	0	.
chr14	55846190	55846191	chr14:55846191:G:A	rs999817	G	A	A	Sox2_MA0143.3	23	0	-	0	0	.
chr14	55885244	55885245	chr14:55885245:A:G	rs72723589	A	G	A	Sox2_MA0143.3	8	0	+	0	0	.
chr14	55913897	55913898	chr14:55913898:A:G	rs143815104	A	G	A	Sox2_MA0143.3	-6	0	-	0	0	.
chr14	55913908	55913909	chr14:55913909:G:A	rs117533436	G	A	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr14	55913910	55913911	chr14:55913911:C:T	rs75309282	C	T	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr14	55938355	55938356	chr14:55938356:T:A	rs74461128	T	A	T	Sox2_MA0143.3	3	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr14	55979438	55979439	chr14:55979439:T:A	rs1188176	T	A	.	Sox2_MA0143.3	-15	0	-	0	0	.
chr14	56026277	56026278	chr14:56026278:T:C	rs1756626	T	C	C	Sox2_MA0143.3	8	0	+	0	0	.
chr14	56042795	56042796	chr14:56042796:G:A	rs241537	G	A	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr14	56051201	56051202	chr14:56051202:C:T	rs74051993	C	T	T	Sox2_MA0143.3	7	1	+	9.206767037375712	9.800647049772198	CCTTTGTC
chr14	56150832	56150833	chr14:56150833:C:T	rs113328011	C	T	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr14	56224414	56224415	chr14:56224415:A:C	rs7161103	A	C	A	Sox2_MA0143.3	-4	0	+	0	0	.
chr14	56224433	56224434	chr14:56224434:C:T	rs7161274	C	T	C	Sox2_MA0143.3	15	0	+	0	0	.
chr14	56312225	56312226	chr14:56312226:G:A	rs4901667	G	A	G	Sox2_MA0143.3	16	0	+	0	0	.
chr14	56341087	56341088	chr14:56341088:T:C	rs60143651	T	C	G	Sox2_MA0143.3	19	0	+	0	0	.
chr14	56341088	56341089	chr14:56341089:T:C	rs80174816	T	C	T	Sox2_MA0143.3	20	0	+	0	0	.
chr14	56420285	56420286	chr14:56420286:A:G	rs1189139	A	G	G	Sox2_MA0143.3	4	1	-	8.676919043985553	1.7681642646703322	CCATTGTG
chr14	56555655	56555656	chr14:56555656:G:T	rs2345149	G	T	T	Sox2_MA0143.3	10	0	+	0	0	.
chr14	56585792	56585793	chr14:56585793:G:T	rs3737171	G	T	G	Sox2_MA0143.3	11	0	+	0	0	.
chr14	56666659	56666660	chr14:56666660:G:A	rs115855240	G	A	G	Sox2_MA0143.3	9	0	+	0	0	.
chr14	56666752	56666753	chr14:56666753:G:A	rs74359389	G	A	G	Sox2_MA0143.3	5	1	+	8.676919043985553	1.7681642646703324	CCATTGTG
chr14	56666978	56666979	chr14:56666979:T:C	rs4901711	T	C	T	Sox2_MA0143.3	4	1	+	9.800647049772198	2.8918922704569785	CCTTTGTT
chr14	56678049	56678050	chr14:56678050:G:C	rs4901729	G	C	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr14	56714497	56714498	chr14:56714498:T:A	rs17092000	T	A	T	Sox2_MA0143.3	2	1	-	9.613475778572903	9.800647049772198	CCATTGTT
chr14	57061134	57061135	chr14:57061135:T:C	rs76334930	T	C	T	Sox2_MA0143.3	25	0	-	0	0	.
chr14	57089127	57089128	chr14:57089128:C:G	rs6573116	C	G	G	Sox2_MA0143.3	13	0	+	0	0	.
chr14	57119978	57119979	chr14:57119979:C:T	rs2154209	C	T	T	Sox2_MA0143.3	23	0	+	0	0	.
chr14	57150435	57150436	chr14:57150436:C:T	rs117332043	C	T	C	Sox2_MA0143.3	27	0	-	0	0	.
chr14	57390443	57390444	chr14:57390444:G:C	rs11158159	G	C	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr14	57390843	57390844	chr14:57390844:C:T	rs187977558	C	T	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr14	57390862	57390863	chr14:57390863:C:T	chr14:57390863:C:T	C	T	c	Sox2_MA0143.3	10	0	+	0	0	.
chr14	57464725	57464726	chr14:57464726:G:T	rs1152537	G	T	G	Sox2_MA0143.3	17	0	-	0	0	.
chr14	57501450	57501451	chr14:57501451:A:G	rs545698921	A	G	A	Sox2_MA0143.3	-15	0	-	0	0	.
chr14	57501536	57501537	chr14:57501537:T:C	rs8006896	T	C	T	Sox2_MA0143.3	18	0	-	0	0	.
chr14	57821096	57821097	chr14:57821097:T:C	rs8020751	T	C	T	Sox2_MA0143.3	18	0	+	0	0	.
chr14	57840266	57840267	chr14:57840267:T:C	rs2068171	T	C	T	Sox2_MA0143.3	-15	0	-	0	0	.
chr14	57945252	57945253	chr14:57945253:G:A	rs7145496	G	A	A	Sox2_MA0143.3	0	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr14	58138131	58138132	chr14:58138132:A:C	rs11626667	A	C	A	Sox2_MA0143.3	-2	0	-	0	0	.
chr14	58327282	58327283	chr14:58327283:G:A	rs2145598	G	A	G	Sox2_MA0143.3	-16	0	-	0	0	.
chr14	58607417	58607418	chr14:58607418:A:C	rs160459	A	C	C	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr14	58628566	58628567	chr14:58628567:G:T	rs160468	G	T	G	Sox2_MA0143.3	27	0	-	0	0	.
chr14	58664097	58664098	chr14:58664098:G:A	rs172669	G	A	G	Sox2_MA0143.3	5	1	+	9.613475778572903	2.7047209992576837	CCATTGTT
chr14	58702720	58702721	chr14:58702721:T:C	rs170175	T	C	T	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr14	58741718	58741719	chr14:58741719:G:A	rs8020436	G	A	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr14	58807448	58807449	chr14:58807449:G:A	rs11158216	G	A	G	Sox2_MA0143.3	26	0	-	0	0	.
chr14	58866748	58866749	chr14:58866749:C:G	rs367717	C	G	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr14	58871873	58871874	chr14:58871874:G:C	rs10483706	G	C	G	Sox2_MA0143.3	14	0	+	0	0	.
chr14	59015921	59015922	chr14:59015922:T:G	rs7146482	T	G	G	Sox2_MA0143.3	21	0	+	0	0	.
chr14	59046831	59046832	chr14:59046832:C:T	rs17833572	C	T	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr14	59091935	59091936	chr14:59091936:T:C	rs117219682	T	C	T	Sox2_MA0143.3	4	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr14	59107913	59107914	chr14:59107914:T:C	rs8019986	T	C	C	Sox2_MA0143.3	21	0	-	0	0	.
chr14	59148529	59148530	chr14:59148530:T:A	rs774818785	T	A	T	Sox2_MA0143.3	-7	0	+	0	0	.
chr14	59198051	59198052	chr14:59198052:A:G	rs1252917	A	G	A	Sox2_MA0143.3	-20	0	+	0	0	.
chr14	59251811	59251812	chr14:59251812:A:C	rs17255451	A	C	A	Sox2_MA0143.3	3	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr14	59278371	59278372	chr14:59278372:C:T	rs78622893	C	T	C	Sox2_MA0143.3	10	0	-	0	0	.
chr14	59313174	59313175	chr14:59313175:A:C	rs1052965299	A	C	A	Sox2_MA0143.3	-13	0	-	0	0	.
chr14	59346642	59346643	chr14:59346643:A:G	rs1536619	A	G	A	Sox2_MA0143.3	8	0	-	0	0	.
chr14	59407194	59407195	chr14:59407195:C:T	rs55840745	C	T	T	Sox2_MA0143.3	14	0	-	0	0	.
chr14	59424783	59424784	chr14:59424784:G:C	rs914267550	G	C	G	Sox2_MA0143.3	1	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr14	59424787	59424788	chr14:59424788:T:C	rs17093317	T	C	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr14	59485007	59485008	chr14:59485008:A:G	rs369613111	A	G	A	Sox2_MA0143.3	4	1	-	8.864090315184848	1.9553355358696274	CCTTTGTG
chr14	59509285	59509286	chr14:59509286:C:G	rs12896753	C	G	C	Sox2_MA0143.3	24	0	-	0	0	.
chr14	59547406	59547407	chr14:59547407:C:T	rs1118478	C	T	C	Sox2_MA0143.3	16	0	-	0	0	.
chr14	59547415	59547416	chr14:59547416:A:T	rs3899646	A	T	A	Sox2_MA0143.3	7	1	-	9.800647049772198	3.5547341015215945	CCTTTGTT
chr14	59699595	59699596	chr14:59699596:C:T	rs9652350	C	T	C	Sox2_MA0143.3	25	0	-	0	0	.
chr14	59918162	59918163	chr14:59918163:C:T	rs8015360	C	T	T	Sox2_MA0143.3	25	0	-	0	0	.
chr14	60217273	60217274	chr14:60217274:G:A	rs7145915	G	A	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr14	60329200	60329201	chr14:60329201:T:C	rs1456022673	T	C	T	Sox2_MA0143.3	25	0	+	0	0	.
chr14	60647690	60647691	chr14:60647691:C:T	rs74380077	C	T	C	Sox2_MA0143.3	-20	0	-	0	0	.
chr14	60822400	60822401	chr14:60822401:G:C	rs8004671	G	C	G	Sox2_MA0143.3	22	0	+	0	0	.
chr14	61144606	61144607	chr14:61144607:C:T	rs56003979	C	T	c	Sox2_MA0143.3	16	0	-	0	0	.
chr14	61148137	61148138	chr14:61148138:C:T	rs77107128	C	T	C	Sox2_MA0143.3	18	0	+	0	0	.
chr14	61156981	61156982	chr14:61156982:A:G	rs10134540	A	G	G	Sox2_MA0143.3	9	0	-	0	0	.
chr14	61178258	61178259	chr14:61178259:G:T	rs56132967	G	T	T	Sox2_MA0143.3	10	0	+	0	0	.
chr14	61179519	61179520	chr14:61179520:C:T	rs188358206	C	T	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr14	61240125	61240126	chr14:61240126:C:G	rs2185446	C	G	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr14	61240126	61240127	chr14:61240127:G:A	rs2185447	G	A	A	Sox2_MA0143.3	-6	0	+	0	0	.
chr14	61319885	61319886	chr14:61319886:T:C	rs10873140	T	C	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr14	61322473	61322474	chr14:61322474:G:A	rs79204130	G	A	G	Sox2_MA0143.3	-12	0	+	0	0	.
chr14	61322511	61322512	chr14:61322512:C:T	rs1386456827	C	T	C	Sox2_MA0143.3	26	0	+	0	0	.
chr14	61344349	61344350	chr14:61344350:C:T	rs117843492	C	T	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr14	61356495	61356496	chr14:61356496:A:G	rs17098255	A	G	A	Sox2_MA0143.3	19	0	-	0	0	.
chr14	61416966	61416967	chr14:61416967:G:C	rs12434139	G	C	G	Sox2_MA0143.3	12	0	+	0	0	.
chr14	61425472	61425473	chr14:61425473:A:G	rs7159151	A	G	A	Sox2_MA0143.3	-14	0	+	0	0	.
chr14	61428297	61428298	chr14:61428298:G:T	rs117588109	G	T	G	Sox2_MA0143.3	5	1	+	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr14	61462812	61462813	chr14:61462813:G:A	rs17098411	G	A	G	Sox2_MA0143.3	5	1	+	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr14	61466240	61466241	chr14:61466241:G:A	rs78799703	G	A	G	Sox2_MA0143.3	-3	0	-	0	0	.
chr14	61477703	61477704	chr14:61477704:A:G	rs77899560	A	G	A	Sox2_MA0143.3	26	0	+	0	0	.
chr14	61554201	61554202	chr14:61554202:T:G	rs17098810	T	G	G	Sox2_MA0143.3	3	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr14	61556545	61556546	chr14:61556546:A:C	rs2251244	A	C	A	Sox2_MA0143.3	4	1	-	8.676919043985553	1.7681642646703322	CCATTGTG
chr14	61570578	61570579	chr14:61570579:C:A	rs798792	C	A	A	Sox2_MA0143.3	-17	0	-	0	0	.
chr14	61578764	61578765	chr14:61578765:T:C	rs34839478	T	C	T	Sox2_MA0143.3	2	1	-	9.613475778572903	3.494828071296623	CCATTGTT
chr14	61616690	61616691	chr14:61616691:A:C	rs74439810	A	C	A	Sox2_MA0143.3	20	0	-	0	0	.
chr14	61671984	61671985	chr14:61671985:T:G	rs112303964	T	G	T	Sox2_MA0143.3	9	0	-	0	0	.
chr14	61730579	61730580	chr14:61730580:G:A	rs12434438	G	A	G	Sox2_MA0143.3	-12	0	+	0	0	.
chr14	61750054	61750055	chr14:61750055:C:T	rs73317111	C	T	C	Sox2_MA0143.3	10	0	+	0	0	.
chr14	62080750	62080751	chr14:62080751:G:A	rs7148330	G	A	G	Sox2_MA0143.3	11	0	-	0	0	.
chr14	62163305	62163306	chr14:62163306:T:A	rs17736002	T	A	T	Sox2_MA0143.3	-17	0	-	0	0	.
chr14	62289698	62289699	chr14:62289699:C:G	rs74057432	C	G	c	Sox2_MA0143.3	27	0	+	0	0	.
chr14	62428885	62428886	chr14:62428886:A:G	rs2354918	A	G	A	Sox2_MA0143.3	23	0	-	0	0	.
chr14	62428886	62428887	chr14:62428887:C:T	rs2354919	C	T	T	Sox2_MA0143.3	22	0	-	0	0	.
chr14	62442893	62442894	chr14:62442894:A:T	rs73261352	A	T	A	Sox2_MA0143.3	17	0	+	0	0	.
chr14	62691857	62691858	chr14:62691858:T:C	rs115980980	T	C	T	Sox2_MA0143.3	-16	0	-	0	0	.
chr14	62692864	62692865	chr14:62692865:G:C	chr14:62692865:G:C	G	C	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr14	62921787	62921788	chr14:62921788:C:G	rs1956025	C	G	G	Sox2_MA0143.3	5	1	-	8.676919043985553	1.7681642646703324	CCATTGTG
chr14	63072195	63072196	chr14:63072196:A:C	chr14:63072196:A:C	A	C	A	Sox2_MA0143.3	15	0	+	0	0	.
chr14	63285158	63285159	chr14:63285159:G:A	rs1357335235	G	A	G	Sox2_MA0143.3	-9	0	+	0	0	.
chr14	63286225	63286226	chr14:63286226:A:G	rs8006388	A	G	G	Sox2_MA0143.3	21	0	-	0	0	.
chr14	63470926	63470927	chr14:63470927:C:T	rs17101225	C	T	C	Sox2_MA0143.3	15	0	-	0	0	.
chr14	63513940	63513941	chr14:63513941:T:G	rs61983977	T	G	T	Sox2_MA0143.3	-1	0	-	0	0	.
chr14	63656198	63656199	chr14:63656199:C:T	rs76211718	C	T	c	Sox2_MA0143.3	-15	0	+	0	0	.
chr14	63910045	63910046	chr14:63910046:T:C	rs11158520	T	C	T	Sox2_MA0143.3	6	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr14	63910053	63910054	chr14:63910054:G:A	rs8010385	G	A	G	Sox2_MA0143.3	14	0	+	0	0	.
chr14	64084836	64084837	chr14:64084837:G:A	rs1255954	G	A	G	Sox2_MA0143.3	19	0	-	0	0	.
chr14	64296880	64296881	chr14:64296881:G:A	rs10483774	G	A	G	Sox2_MA0143.3	7	1	-	9.019595766176417	9.613475778572903	CCATTGTC
chr14	64438442	64438443	chr14:64438443:C:T	rs140405444	C	T	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr14	64658830	64658831	chr14:64658831:T:C	rs7154142	T	C	T	Sox2_MA0143.3	6	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr14	64682508	64682509	chr14:64682509:A:C	rs4902307	A	C	A	Sox2_MA0143.3	4	1	-	9.206767037375712	2.2980122580604916	CCTTTGTC
chr14	64707120	64707121	chr14:64707121:C:T	rs229662	C	T	C	Sox2_MA0143.3	9	0	+	0	0	.
chr14	64708675	64708676	chr14:64708676:A:G	rs74999772	A	G	A	Sox2_MA0143.3	2	1	-	3.5547341015215945	-2.751084876953981	CCTTTGTA
chr14	64758962	64758963	chr14:64758963:G:A	rs74058211	G	A	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr14	64774509	64774510	chr14:64774510:A:G	rs229592	A	G	G	Sox2_MA0143.3	4	1	-	8.676919043985553	1.7681642646703322	CCATTGTG
chr14	64881439	64881440	chr14:64881440:C:A	rs1122339	C	A	A	Sox2_MA0143.3	-19	0	+	0	0	.
chr14	64949024	64949025	chr14:64949025:C:T	rs57319601	C	T	C	Sox2_MA0143.3	23	0	+	0	0	.
chr14	65096308	65096309	chr14:65096309:T:C	rs57911949	T	C	T	Sox2_MA0143.3	2	1	-	9.019595766176417	2.900948058900136	CCATTGTC
chr14	65208467	65208468	chr14:65208468:C:G	rs113914872	C	G	C	Sox2_MA0143.3	-5	0	-	0	0	.
chr14	65218377	65218378	chr14:65218378:T:C	rs60242721	T	C	T	Sox2_MA0143.3	-15	0	-	0	0	.
chr14	65253860	65253861	chr14:65253861:G:A	rs76734026	G	A	G	Sox2_MA0143.3	17	0	-	0	0	.
chr14	65659511	65659512	chr14:65659512:A:G	rs1998035	A	G	A	Sox2_MA0143.3	-16	0	+	0	0	.
chr14	65745652	65745653	chr14:65745653:A:G	rs7147231	A	G	G	Sox2_MA0143.3	16	0	+	0	0	.
chr14	65752798	65752799	chr14:65752799:G:A	rs10483785	G	A	G	Sox2_MA0143.3	23	0	+	0	0	.
chr14	65846848	65846849	chr14:65846849:A:G	rs66485814	A	G	A	Sox2_MA0143.3	12	0	-	0	0	.
chr14	66003630	66003631	chr14:66003631:A:G	rs11850442	A	G	A	Sox2_MA0143.3	8	0	+	0	0	.
chr14	66003646	66003647	chr14:66003647:A:G	rs1147440	A	G	A	Sox2_MA0143.3	24	0	+	0	0	.
chr14	66086964	66086965	chr14:66086965:G:A	rs17827524	G	A	G	Sox2_MA0143.3	17	0	-	0	0	.
chr14	66224651	66224652	chr14:66224652:A:G	rs8021972	A	G	G	Sox2_MA0143.3	13	0	+	0	0	.
chr14	66249183	66249184	chr14:66249184:G:A	rs76390071	G	A	G	Sox2_MA0143.3	11	0	-	0	0	.
chr14	66395146	66395147	chr14:66395147:A:C	rs8007262	A	C	C	Sox2_MA0143.3	6	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr14	67068811	67068812	chr14:67068812:A:G	rs77302186	A	G	G	Sox2_MA0143.3	9	0	-	0	0	.
chr14	67241714	67241715	chr14:67241715:A:G	rs374891096	A	G	A	Sox2_MA0143.3	-15	0	+	0	0	.
chr14	67427465	67427466	chr14:67427466:C:G	rs17104305	C	G	C	Sox2_MA0143.3	1	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr14	67430953	67430954	chr14:67430954:A:G	rs10146483	A	G	A	Sox2_MA0143.3	17	0	+	0	0	.
chr14	67517304	67517305	chr14:67517305:C:T	rs750388425	C	T	C	Sox2_MA0143.3	24	0	-	0	0	.
chr14	67517342	67517343	chr14:67517343:C:G	rs17104389	C	G	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr14	67633958	67633959	chr14:67633959:T:C	rs12436474	T	C	T	Sox2_MA0143.3	19	0	+	0	0	.
chr14	67720045	67720046	chr14:67720046:C:A	rs75509977	C	A	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr14	67767083	67767084	chr14:67767084:A:T	rs117573691	A	T	A	Sox2_MA0143.3	9	0	-	0	0	.
chr14	67819193	67819194	chr14:67819194:C:G	rs12882171	C	G	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr14	68172249	68172250	chr14:68172250:T:A	rs1555942	T	A	A	Sox2_MA0143.3	21	0	+	0	0	.
chr14	68268492	68268493	chr14:68268493:G:T	rs188540236	G	T	G	Sox2_MA0143.3	16	0	+	0	0	.
chr14	68363040	68363041	chr14:68363041:C:A	rs79905734	C	A	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr14	68506472	68506473	chr14:68506473:A:G	rs55642017	A	G	A	Sox2_MA0143.3	-3	0	-	0	0	.
chr14	68506700	68506701	chr14:68506701:G:A	rs79549278	G	A	G	Sox2_MA0143.3	17	0	-	0	0	.
chr14	68506737	68506738	chr14:68506738:G:A	rs71423313	G	A	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr14	68513211	68513212	chr14:68513212:A:G	rs1541390	A	G	A	Sox2_MA0143.3	3	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr14	68565141	68565142	chr14:68565142:C:T	rs74867326	C	T	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr14	68565142	68565143	chr14:68565143:G:A	rs1468280	G	A	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr14	68565150	68565151	chr14:68565151:T:A	rs12588940	T	A	T	Sox2_MA0143.3	-16	0	-	0	0	.
chr14	68586479	68586480	chr14:68586480:A:G	rs8008333	A	G	A	Sox2_MA0143.3	-7	0	-	0	0	.
chr14	68596459	68596460	chr14:68596460:G:A	rs72729538	G	A	G	Sox2_MA0143.3	13	0	-	0	0	.
chr14	68605385	68605386	chr14:68605386:T:G	rs10137147	T	G	T	Sox2_MA0143.3	15	0	-	0	0	.
chr14	68616396	68616397	chr14:68616397:A:T	chr14:68616397:A:T	A	T	A	Sox2_MA0143.3	-11	0	+	0	0	.
chr14	68626919	68626920	chr14:68626920:T:A	rs8007479	T	A	T	Sox2_MA0143.3	6	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr14	68626925	68626926	chr14:68626926:C:T	rs76495834	C	T	C	Sox2_MA0143.3	12	0	+	0	0	.
chr14	68675672	68675673	chr14:68675673:A:G	rs4902630	A	G	A	Sox2_MA0143.3	12	0	+	0	0	.
chr14	68680622	68680623	chr14:68680623:A:C	rs528789496	A	C	A	Sox2_MA0143.3	-15	0	+	0	0	.
chr14	68682562	68682563	chr14:68682563:T:C	rs76615693	T	C	T	Sox2_MA0143.3	20	0	-	0	0	.
chr14	68683011	68683012	chr14:68683012:C:G	chr14:68683012:C:G	C	G	C	Sox2_MA0143.3	11	0	-	0	0	.
chr14	68683024	68683025	chr14:68683025:C:A	rs550878404	C	A	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr14	68696737	68696738	chr14:68696738:A:G	rs12886919	A	G	G	Sox2_MA0143.3	23	0	+	0	0	.
chr14	68712259	68712260	chr14:68712260:G:A	rs9646162	G	A	G	Sox2_MA0143.3	-12	0	+	0	0	.
chr14	68723445	68723446	chr14:68723446:G:A	rs17835428	G	A	G	Sox2_MA0143.3	22	0	+	0	0	.
chr14	68724127	68724128	chr14:68724128:C:T	rs10131812	C	T	G	Sox2_MA0143.3	15	0	+	0	0	.
chr14	68736108	68736109	chr14:68736109:T:C	rs7144216	T	C	T	Sox2_MA0143.3	-13	0	-	0	0	.
chr14	68774737	68774738	chr14:68774738:C:T	rs74375704	C	T	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr14	68782137	68782138	chr14:68782138:T:G	rs72731551	T	G	T	Sox2_MA0143.3	-9	0	+	0	0	.
chr14	68811082	68811083	chr14:68811083:G:T	rs10139199	G	T	N	Sox2_MA0143.3	15	0	+	0	0	.
chr14	68863121	68863122	chr14:68863122:T:C	rs440317	T	C	t	Sox2_MA0143.3	2	1	-	9.613475778572903	3.494828071296623	CCATTGTT
chr14	68863249	68863250	chr14:68863250:G:A	chr14:68863250:G:A	G	A	g	Sox2_MA0143.3	5	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr14	68900323	68900324	chr14:68900324:C:T	rs61985079	C	T	C	Sox2_MA0143.3	19	0	+	0	0	.
chr14	68924661	68924662	chr14:68924662:A:G	rs74494843	A	G	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr14	68933490	68933491	chr14:68933491:T:C	rs59245623	T	C	T	Sox2_MA0143.3	2	1	+	9.800647049772198	3.494828071296623	CCTTTGTT
chr14	68970513	68970514	chr14:68970514:A:G	rs8009158	A	G	A	Sox2_MA0143.3	3	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr14	69018127	69018128	chr14:69018128:A:G	rs72718241	A	G	A	Sox2_MA0143.3	23	0	-	0	0	.
chr14	69042048	69042049	chr14:69042049:G:T	rs560581647	G	T	G	Sox2_MA0143.3	1	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr14	69050776	69050777	chr14:69050777:G:A	rs10135971	G	A	G	Sox2_MA0143.3	10	0	+	0	0	.
chr14	69060306	69060307	chr14:69060307:A:G	rs75183997	A	G	A	Sox2_MA0143.3	-11	0	-	0	0	.
chr14	69062778	69062779	chr14:69062779:C:G	rs28527397	C	G	C	Sox2_MA0143.3	21	0	+	0	0	.
chr14	69094475	69094476	chr14:69094476:A:G	rs2001355	A	G	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr14	69191346	69191347	chr14:69191347:T:G	rs185981201	T	G	T	Sox2_MA0143.3	-9	0	+	0	0	.
chr14	69236440	69236441	chr14:69236441:A:G	rs3211166	A	G	A	Sox2_MA0143.3	16	0	+	0	0	.
chr14	69249720	69249721	chr14:69249721:C:T	rs12431706	C	T	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr14	69286144	69286145	chr14:69286145:T:C	rs1017568522	T	C	T	Sox2_MA0143.3	18	0	-	0	0	.
chr14	69291544	69291545	chr14:69291545:T:A	rs867402	T	A	T	Sox2_MA0143.3	-15	0	-	0	0	.
chr14	69376718	69376719	chr14:69376719:G:A	rs144358945	G	A	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr14	69468880	69468881	chr14:69468881:C:T	rs77751205	C	T	C	Sox2_MA0143.3	15	0	+	0	0	.
chr14	69685345	69685346	chr14:69685346:A:T	rs567716627	A	T	A	Sox2_MA0143.3	19	0	+	0	0	.
chr14	69725898	69725899	chr14:69725899:T:C	rs57346352	T	C	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr14	69774662	69774663	chr14:69774663:A:C	rs11628646	A	C	C	Sox2_MA0143.3	23	0	+	0	0	.
chr14	69796930	69796931	chr14:69796931:C:T	rs4646285	C	T	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr14	69815215	69815216	chr14:69815216:C:T	rs11628546	C	T	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr14	69816997	69816998	chr14:69816998:G:A	rs13313365	G	A	G	Sox2_MA0143.3	22	0	-	0	0	.
chr14	69820448	69820449	chr14:69820449:T:C	rs10134740	T	C	C	Sox2_MA0143.3	8	0	-	0	0	.
chr14	69885513	69885514	chr14:69885514:T:C	rs879069493	T	C	-	Sox2_MA0143.3	11	0	+	0	0	.
chr14	69888129	69888130	chr14:69888130:G:A	rs77925255	G	A	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr14	69964020	69964021	chr14:69964021:G:A	rs78044097	G	A	G	Sox2_MA0143.3	22	0	+	0	0	.
chr14	70002190	70002191	chr14:70002191:G:C	rs1459704	G	C	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr14	70025045	70025046	chr14:70025046:G:T	rs72729808	G	T	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr14	70074451	70074452	chr14:70074452:A:G	rs12436004	A	G	A	Sox2_MA0143.3	16	0	+	0	0	.
chr14	70118300	70118301	chr14:70118301:T:C	rs10147945	T	C	T	Sox2_MA0143.3	-13	0	-	0	0	.
chr14	70130633	70130634	chr14:70130634:C:T	rs11158836	C	T	C	Sox2_MA0143.3	16	0	-	0	0	.
chr14	70177579	70177580	chr14:70177580:G:A	rs12884224	G	A	G	Sox2_MA0143.3	15	0	-	0	0	.
chr14	70177580	70177581	chr14:70177581:C:A	rs12883951	C	A	C	Sox2_MA0143.3	14	0	-	0	0	.
chr14	70230084	70230085	chr14:70230085:A:G	rs147133960	A	G	A	Sox2_MA0143.3	27	0	+	0	0	.
chr14	70343851	70343852	chr14:70343852:G:A	rs34767236	G	A	G	Sox2_MA0143.3	12	0	-	0	0	.
chr14	70367101	70367102	chr14:70367102:C:G	rs1044527	C	G	C	Sox2_MA0143.3	16	0	-	0	0	.
chr14	70561535	70561536	chr14:70561536:A:G	rs4899360	A	G	A	Sox2_MA0143.3	-3	0	-	0	0	.
chr14	70567434	70567435	chr14:70567435:G:A	rs79733659	G	A	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr14	70585390	70585391	chr14:70585391:C:T	rs2153113	C	T	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr14	70701570	70701571	chr14:70701571:A:G	rs80002302	A	G	A	Sox2_MA0143.3	-20	0	-	0	0	.
chr14	70782512	70782513	chr14:70782513:C:T	rs10141804	C	T	C	Sox2_MA0143.3	5	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr14	70878733	70878734	chr14:70878734:T:A	rs58846294	T	A	T	Sox2_MA0143.3	18	0	-	0	0	.
chr14	71021936	71021937	chr14:71021937:G:A	rs7153237	G	A	A	Sox2_MA0143.3	-13	0	+	0	0	.
chr14	71138649	71138650	chr14:71138650:T:C	rs7147788	T	C	T	Sox2_MA0143.3	6	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr14	71322228	71322229	chr14:71322229:C:T	rs12884929	C	T	T	Sox2_MA0143.3	7	1	+	9.019595766176417	9.613475778572903	CCATTGTC
chr14	71497688	71497689	chr14:71497689:G:C	rs61989379	G	C	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr14	71532489	71532490	chr14:71532490:C:T	rs374600512	C	T	C	Sox2_MA0143.3	19	0	+	0	0	.
chr14	71536158	71536159	chr14:71536159:T:C	rs138142801	T	C	T	Sox2_MA0143.3	12	0	-	0	0	.
chr14	71592833	71592834	chr14:71592834:G:A	rs3784064	G	A	A	Sox2_MA0143.3	-11	0	+	0	0	.
chr14	71606252	71606253	chr14:71606253:A:G	rs10136590	A	G	A	Sox2_MA0143.3	3	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr14	71780404	71780405	chr14:71780405:G:T	rs7152273	G	T	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr14	71813539	71813540	chr14:71813540:C:T	rs1205090	C	T	T	Sox2_MA0143.3	24	0	-	0	0	.
chr14	71883494	71883495	chr14:71883495:C:T	rs10138587	C	T	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr14	71883495	71883496	chr14:71883496:G:T	rs36428	G	T	T	Sox2_MA0143.3	-2	0	+	0	0	.
chr14	72129736	72129737	chr14:72129737:G:A	rs2238258	G	A	G	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr14	72164894	72164895	chr14:72164895:G:C	rs149671	G	C	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr14	72318729	72318730	chr14:72318730:G:T	rs847352	G	T	T	Sox2_MA0143.3	-1	0	+	0	0	.
chr14	72318755	72318756	chr14:72318756:A:T	rs2239251	A	T	A	Sox2_MA0143.3	25	0	+	0	0	.
chr14	72405227	72405228	chr14:72405228:T:A	rs10134133	T	A	A	Sox2_MA0143.3	-3	0	+	0	0	.
chr14	72560291	72560292	chr14:72560292:G:A	rs11621387	G	A	A	Sox2_MA0143.3	-10	0	+	0	0	.
chr14	72614107	72614108	chr14:72614108:C:T	rs149286694	C	T	C	Sox2_MA0143.3	9	0	+	0	0	.
chr14	72633940	72633941	chr14:72633941:T:C	rs17180845	T	C	T	Sox2_MA0143.3	-18	0	-	0	0	.
chr14	72689026	72689027	chr14:72689027:T:C	rs2526941	T	C	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr14	72700135	72700136	chr14:72700136:C:T	rs12434793	C	T	T	Sox2_MA0143.3	7	1	-	8.676919043985553	3.3675628303222993	CCATTGTG
chr14	72715344	72715345	chr14:72715345:C:G	chr14:72715345:C:G	C	G	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr14	72781372	72781373	chr14:72781373:T:C	rs12437188	T	C	T	Sox2_MA0143.3	12	0	-	0	0	.
chr14	72781403	72781404	chr14:72781404:T:C	rs906554110	T	C	T	Sox2_MA0143.3	-19	0	-	0	0	.
chr14	72788786	72788787	chr14:72788787:T:C	rs55702801	T	C	T	Sox2_MA0143.3	-7	0	-	0	0	.
chr14	72794591	72794592	chr14:72794592:A:T	rs76383364	A	T	A	Sox2_MA0143.3	-4	0	+	0	0	.
chr14	72798850	72798851	chr14:72798851:C:T	rs11623819	C	T	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr14	72802009	72802010	chr14:72802010:G:A	rs12889886	G	A	G	Sox2_MA0143.3	10	0	-	0	0	.
chr14	72813149	72813150	chr14:72813150:T:C	rs2109795	T	C	C	Sox2_MA0143.3	19	0	+	0	0	.
chr14	72838188	72838189	chr14:72838189:G:A	rs145605559	G	A	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr14	72871488	72871489	chr14:72871489:C:G	rs10145776	C	G	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr14	72877006	72877007	chr14:72877007:C:T	rs982972	C	T	C	Sox2_MA0143.3	1	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr14	72915913	72915914	chr14:72915914:T:A	rs72732487	T	A	T	Sox2_MA0143.3	-18	0	+	0	0	.
chr14	72936224	72936225	chr14:72936225:C:G	rs12892806	C	G	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr14	73065967	73065968	chr14:73065968:A:G	rs2806047	A	G	A	Sox2_MA0143.3	25	0	+	0	0	.
chr14	73112672	73112673	chr14:73112673:C:G	rs165936	C	G	C	Sox2_MA0143.3	18	0	+	0	0	.
chr14	73243987	73243988	chr14:73243988:A:C	rs1008245	A	C	a	Sox2_MA0143.3	18	0	-	0	0	.
chr14	73244025	73244026	chr14:73244026:G:A	rs177406	G	A	-	Sox2_MA0143.3	-20	0	-	0	0	.
chr14	73258082	73258083	chr14:73258083:T:C	rs17126411	T	C	T	Sox2_MA0143.3	-2	0	+	0	0	.
chr14	73274477	73274478	chr14:73274478:T:C	rs1047849	T	C	T	Sox2_MA0143.3	23	0	-	0	0	.
chr14	73424556	73424557	chr14:73424557:C:T	rs758110	C	T	T	Sox2_MA0143.3	24	0	-	0	0	.
chr14	73464901	73464902	chr14:73464902:G:A	rs11625005	G	A	.	Sox2_MA0143.3	-15	0	+	0	0	.
chr14	73477793	73477794	chr14:73477794:T:C	rs75663906	T	C	C	Sox2_MA0143.3	10	0	-	0	0	.
chr14	73724436	73724437	chr14:73724437:G:A	rs139670636	G	A	G	Sox2_MA0143.3	25	0	+	0	0	.
chr14	73823800	73823801	chr14:73823801:G:C	rs35968618	G	C	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr14	73836691	73836692	chr14:73836692:A:G	rs72625702	A	G	A	Sox2_MA0143.3	-2	0	-	0	0	.
chr14	73875709	73875710	chr14:73875710:T:C	rs17093474	T	C	t	Sox2_MA0143.3	7	1	+	9.613475778572903	9.019595766176417	CCATTGTT
chr14	74009092	74009093	chr14:74009093:T:C	rs10151810	T	C	C	Sox2_MA0143.3	21	0	+	0	0	.
chr14	74009320	74009321	chr14:74009321:A:T	rs62005075	A	T	A	Sox2_MA0143.3	21	0	+	0	0	.
chr14	74062729	74062730	chr14:74062730:A:G	rs75646425	A	G	A	Sox2_MA0143.3	8	0	+	0	0	.
chr14	74249799	74249800	chr14:74249800:A:G	rs10139627	A	G	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr14	74294754	74294755	chr14:74294755:A:G	rs61486287	A	G	a	Sox2_MA0143.3	27	0	-	0	0	.
chr14	74294771	74294772	chr14:74294772:G:A	rs59461095	G	A	A	Sox2_MA0143.3	10	0	-	0	0	.
chr14	74300424	74300425	chr14:74300425:G:A	rs7158118	G	A	G	Sox2_MA0143.3	10	0	-	0	0	.
chr14	74327177	74327178	chr14:74327178:G:A	rs72730121	G	A	A	Sox2_MA0143.3	-8	0	-	0	0	.
chr14	74389705	74389706	chr14:74389706:T:C	rs917418	T	C	C	Sox2_MA0143.3	11	0	-	0	0	.
chr14	74442679	74442680	chr14:74442680:G:C	rs60147521	G	C	G	Sox2_MA0143.3	8	0	-	0	0	.
chr14	74442707	74442708	chr14:74442708:G:A	rs56992115	G	A	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr14	74460088	74460089	chr14:74460089:T:C	rs17100386	T	C	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr14	74467917	74467918	chr14:74467918:T:C	rs17100414	T	C	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr14	74491916	74491917	chr14:74491917:C:T	rs8015894	C	T	C	Sox2_MA0143.3	23	0	+	0	0	.
chr14	74551727	74551728	chr14:74551728:A:G	rs11625990	A	G	A	Sox2_MA0143.3	22	0	+	0	0	.
chr14	74573838	74573839	chr14:74573839:G:A	rs79903399	G	A	G	Sox2_MA0143.3	7	1	+	8.864090315184848	3.5547341015215945	CCTTTGTG
chr14	74580176	74580177	chr14:74580177:A:G	rs61980912	A	G	A	Sox2_MA0143.3	21	0	-	0	0	.
chr14	74606244	74606245	chr14:74606245:G:C	rs61980922	G	C	G	Sox2_MA0143.3	-2	0	+	0	0	.
chr14	74606250	74606251	chr14:74606251:T:G	rs61980923	T	G	T	Sox2_MA0143.3	4	1	+	9.800647049772198	2.8918922704569785	CCTTTGTT
chr14	74861098	74861099	chr14:74861099:C:T	rs146337997	C	T	C	Sox2_MA0143.3	25	0	-	0	0	.
chr14	74861104	74861105	chr14:74861105:T:C	rs144219649	T	C	T	Sox2_MA0143.3	19	0	-	0	0	.
chr14	74888374	74888375	chr14:74888375:G:A	rs948414053	G	A	G	Sox2_MA0143.3	26	0	-	0	0	.
chr14	75132943	75132944	chr14:75132944:A:G	rs3742771	A	G	A	Sox2_MA0143.3	18	0	-	0	0	.
chr14	75160615	75160616	chr14:75160616:T:A	rs175422	T	A	T	Sox2_MA0143.3	26	0	-	0	0	.
chr14	75203731	75203732	chr14:75203732:A:C	rs6574211	A	C	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr14	75259523	75259524	chr14:75259524:A:C	rs149925043	A	C	A	Sox2_MA0143.3	23	0	+	0	0	.
chr14	75272940	75272941	chr14:75272941:T:C	rs8013789	T	C	C	Sox2_MA0143.3	17	0	+	0	0	.
chr14	75283401	75283402	chr14:75283402:G:A	rs4645873	G	A	A	Sox2_MA0143.3	9	0	+	0	0	.
chr14	75283401	75283402	chr14:75283402:G:C	chr14:75283402:G:C	G	C	A	Sox2_MA0143.3	9	0	+	0	0	.
chr14	75301979	75301980	chr14:75301980:C:T	rs1044709291	C	T	C	Sox2_MA0143.3	25	0	+	0	0	.
chr14	75317564	75317565	chr14:75317565:G:T	rs760247	G	T	G	Sox2_MA0143.3	24	0	+	0	0	.
chr14	75330215	75330216	chr14:75330216:C:G	rs74504985	C	G	C	Sox2_MA0143.3	13	0	+	0	0	.
chr14	75330446	75330447	chr14:75330447:A:C	rs7149458	A	C	A	Sox2_MA0143.3	25	0	-	0	0	.
chr14	75395339	75395340	chr14:75395340:C:T	rs12589392	C	T	C	Sox2_MA0143.3	11	0	+	0	0	.
chr14	75431640	75431641	chr14:75431641:A:T	rs11627913	A	T	A	Sox2_MA0143.3	-20	0	+	0	0	.
chr14	75552766	75552767	chr14:75552767:C:A	rs77186335	C	A	C	Sox2_MA0143.3	5	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr14	75794846	75794847	chr14:75794847:A:T	rs146860862	A	T	a	Sox2_MA0143.3	-3	0	+	0	0	.
chr14	75803803	75803804	chr14:75803804:A:G	rs77518129	A	G	A	Sox2_MA0143.3	-12	0	+	0	0	.
chr14	75823577	75823578	chr14:75823578:C:G	rs117190460	C	G	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr14	75849721	75849722	chr14:75849722:G:T	rs110480	G	T	T	Sox2_MA0143.3	-4	0	-	0	0	.
chr14	75861543	75861544	chr14:75861544:T:C	rs61980817	T	C	T	Sox2_MA0143.3	23	0	-	0	0	.
chr14	75912097	75912098	chr14:75912098:C:T	chr14:75912098:C:T	C	T	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr14	75941206	75941207	chr14:75941207:T:C	chr14:75941207:T:C	T	C	T	Sox2_MA0143.3	-17	0	+	0	0	.
chr14	76041115	76041116	chr14:76041116:A:G	rs17183866	A	G	A	Sox2_MA0143.3	-8	0	+	0	0	.
chr14	76053311	76053312	chr14:76053312:A:G	rs11159165	A	G	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr14	76084002	76084003	chr14:76084003:C:T	rs997237	C	T	C	Sox2_MA0143.3	18	0	+	0	0	.
chr14	76089044	76089045	chr14:76089045:C:G	rs77416831	C	G	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr14	76121501	76121502	chr14:76121502:G:A	rs11626830	G	A	A	Sox2_MA0143.3	21	0	-	0	0	.
chr14	76205760	76205761	chr14:76205761:A:C	rs60135001	A	C	A	Sox2_MA0143.3	-19	0	-	0	0	.
chr14	76260358	76260359	chr14:76260359:C:T	rs10132822	C	T	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr14	76289931	76289932	chr14:76289932:G:A	rs75530114	G	A	G	Sox2_MA0143.3	8	0	-	0	0	.
chr14	76294243	76294244	chr14:76294244:C:T	rs73308685	C	T	C	Sox2_MA0143.3	27	0	-	0	0	.
chr14	76294244	76294245	chr14:76294245:C:T	rs1375891625	C	T	C	Sox2_MA0143.3	26	0	-	0	0	.
chr14	76339395	76339396	chr14:76339396:A:G	rs7146132	A	G	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr14	76353136	76353137	chr14:76353137:C:T	rs71429953	C	T	C	Sox2_MA0143.3	1	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr14	76366415	76366416	chr14:76366416:A:G	rs57285266	A	G	A	Sox2_MA0143.3	3	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr14	76396563	76396564	chr14:76396564:T:C	rs4903407	T	C	C	Sox2_MA0143.3	26	0	-	0	0	.
chr14	76504335	76504336	chr14:76504336:C:T	rs28615161	C	T	C	Sox2_MA0143.3	12	0	+	0	0	.
chr14	76593246	76593247	chr14:76593247:C:T	rs12147436	C	T	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr14	76631423	76631424	chr14:76631424:C:T	rs1642832	C	T	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr14	76712206	76712207	chr14:76712207:G:A	rs67128002	G	A	A	Sox2_MA0143.3	18	0	-	0	0	.
chr14	76728010	76728011	chr14:76728011:T:G	rs76173564	T	G	T	Sox2_MA0143.3	-20	0	-	0	0	.
chr14	76753859	76753860	chr14:76753860:T:C	rs6574324	T	C	T	Sox2_MA0143.3	-7	0	-	0	0	.
chr14	76899126	76899127	chr14:76899127:T:C	rs76386502	T	C	T	Sox2_MA0143.3	12	0	-	0	0	.
chr14	76958527	76958528	chr14:76958528:C:A	rs116052751	C	A	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr14	76985540	76985541	chr14:76985541:C:T	rs72721394	C	T	C	Sox2_MA0143.3	11	0	+	0	0	.
chr14	77050620	77050621	chr14:77050621:A:C	rs205808	A	C	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr14	77064634	77064635	chr14:77064635:G:A	rs75535732	G	A	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr14	77094890	77094891	chr14:77094891:C:T	rs115727965	C	T	C	Sox2_MA0143.3	18	0	-	0	0	.
chr14	77152618	77152619	chr14:77152619:A:C	rs7159372	A	C	A	Sox2_MA0143.3	-11	0	-	0	0	.
chr14	77197751	77197752	chr14:77197752:C:T	rs2661823	C	T	T	Sox2_MA0143.3	24	0	+	0	0	.
chr14	77239067	77239068	chr14:77239068:A:C	rs2287379	A	C	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr14	77282017	77282018	chr14:77282018:A:G	rs77071473	A	G	A	Sox2_MA0143.3	10	0	-	0	0	.
chr14	77303647	77303648	chr14:77303648:T:C	rs149165821	T	C	T	Sox2_MA0143.3	-13	0	+	0	0	.
chr14	77407227	77407228	chr14:77407228:C:T	rs35881785	C	T	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr14	77433821	77433822	chr14:77433822:C:T	rs34835605	C	T	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr14	77638553	77638554	chr14:77638554:G:A	rs8017748	G	A	A	Sox2_MA0143.3	-9	0	+	0	0	.
chr14	77645289	77645290	chr14:77645290:G:A	rs12586560	G	A	A	Sox2_MA0143.3	0	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr14	77763565	77763566	chr14:77763566:T:C	rs9323651	T	C	T	Sox2_MA0143.3	-8	0	-	0	0	.
chr14	77842848	77842849	chr14:77842849:C:T	rs2364740	C	T	C	Sox2_MA0143.3	14	0	+	0	0	.
chr14	77948731	77948732	chr14:77948732:C:G	rs8022929	C	G	C	Sox2_MA0143.3	19	0	+	0	0	.
chr14	77978949	77978950	chr14:77978950:G:A	rs4296191	G	A	G	Sox2_MA0143.3	12	0	-	0	0	.
chr14	78127498	78127499	chr14:78127499:C:G	rs177141	C	G	G	Sox2_MA0143.3	22	0	-	0	0	.
chr14	78174490	78174491	chr14:78174491:T:C	rs78726763	T	C	T	Sox2_MA0143.3	3	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr14	78182214	78182215	chr14:78182215:G:A	rs862327	G	A	A	Sox2_MA0143.3	0	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr14	78185852	78185853	chr14:78185853:T:C	rs1569326	T	C	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr14	78502017	78502018	chr14:78502018:A:G	rs55764557	A	G	G	Sox2_MA0143.3	11	0	-	0	0	.
chr14	78596746	78596747	chr14:78596747:C:A	chr14:78596747:C:A	C	A	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr14	78705416	78705417	chr14:78705417:G:A	rs56325306	G	A	G	Sox2_MA0143.3	16	0	-	0	0	.
chr14	78825624	78825625	chr14:78825625:G:A	rs55821066	G	A	G	Sox2_MA0143.3	9	0	-	0	0	.
chr14	78893255	78893256	chr14:78893256:C:T	chr14:78893256:C:T	C	T	C	Sox2_MA0143.3	22	0	+	0	0	.
chr14	78917688	78917689	chr14:78917689:G:A	rs154376	G	A	G	Sox2_MA0143.3	-11	0	+	0	0	.
chr14	78985839	78985840	chr14:78985840:A:G	rs78261576	A	G	A	Sox2_MA0143.3	23	0	+	0	0	.
chr14	79098704	79098705	chr14:79098705:A:G	rs11846325	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr14	79346697	79346698	chr14:79346698:T:C	rs117626347	T	C	T	Sox2_MA0143.3	14	0	+	0	0	.
chr14	79408856	79408857	chr14:79408857:C:A	rs4903855	C	A	A	Sox2_MA0143.3	-15	0	+	0	0	.
chr14	79729934	79729935	chr14:79729935:T:C	rs76806262	T	C	T	Sox2_MA0143.3	-10	0	-	0	0	.
chr14	79736582	79736583	chr14:79736583:G:T	rs2110432	G	T	T	Sox2_MA0143.3	0	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr14	79830076	79830077	chr14:79830077:A:C	rs2293824	A	C	A	Sox2_MA0143.3	-13	0	+	0	0	.
chr14	80120797	80120798	chr14:80120798:T:C	rs10220309	T	C	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr14	80311076	80311077	chr14:80311077:A:C	rs761053866	A	C	A	Sox2_MA0143.3	27	0	+	0	0	.
chr14	80356562	80356563	chr14:80356563:A:C	rs56977215	A	C	A	Sox2_MA0143.3	-16	0	+	0	0	.
chr14	80364924	80364925	chr14:80364925:A:C	rs2115802	A	C	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr14	80394478	80394479	chr14:80394479:C:T	rs3922176	C	T	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr14	80619007	80619008	chr14:80619008:C:T	rs8003492	C	T	T	Sox2_MA0143.3	-20	0	+	0	0	.
chr14	80619030	80619031	chr14:80619031:T:A	rs141090802	T	A	T	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr14	80638537	80638538	chr14:80638538:A:C	rs8012237	A	C	C	Sox2_MA0143.3	23	0	+	0	0	.
chr14	80692892	80692893	chr14:80692893:T:G	rs72690954	T	G	T	Sox2_MA0143.3	-11	0	-	0	0	.
chr14	80705354	80705355	chr14:80705355:G:A	rs12588374	G	A	G	Sox2_MA0143.3	23	0	+	0	0	.
chr14	80769466	80769467	chr14:80769467:C:G	rs327470	C	G	C	Sox2_MA0143.3	0	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr14	80912300	80912301	chr14:80912301:C:T	rs185039997	C	T	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr14	80941959	80941960	chr14:80941960:T:G	rs3742720	T	G	T	Sox2_MA0143.3	-19	0	+	0	0	.
chr14	80941982	80941983	chr14:80941983:T:C	rs80211943	T	C	T	Sox2_MA0143.3	4	1	+	3.5547341015215945	-3.3540206777936254	CCTTTGTA
chr14	80942000	80942001	chr14:80942001:G:C	rs1049574339	G	C	G	Sox2_MA0143.3	22	0	+	0	0	.
chr14	81003247	81003248	chr14:81003248:G:C	rs7152373	G	C	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr14	81029997	81029998	chr14:81029998:A:G	rs10143800	A	G	A	Sox2_MA0143.3	4	1	-	8.864090315184848	1.9553355358696274	CCTTTGTG
chr14	81246184	81246185	chr14:81246185:C:T	rs117240846	C	T	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr14	81386504	81386505	chr14:81386505:A:G	rs1003258	A	G	.	Sox2_MA0143.3	26	0	-	0	0	.
chr14	81589374	81589375	chr14:81589375:G:T	rs7152521	G	T	G	Sox2_MA0143.3	12	0	+	0	0	.
chr14	81649557	81649558	chr14:81649558:C:G	rs113415797	C	G	C	Sox2_MA0143.3	9	0	+	0	0	.
chr14	81685168	81685169	chr14:81685169:C:G	rs56246919	C	G	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr14	81802154	81802155	chr14:81802155:C:T	rs4904032	C	T	C	Sox2_MA0143.3	0	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr14	82180456	82180457	chr14:82180457:C:T	rs17587834	C	T	C	Sox2_MA0143.3	13	0	-	0	0	.
chr14	82528198	82528199	chr14:82528199:A:G	rs2888255	A	G	G	Sox2_MA0143.3	16	0	-	0	0	.
chr14	82549524	82549525	chr14:82549525:T:C	rs17117038	T	C	T	Sox2_MA0143.3	13	0	+	0	0	.
chr14	82666544	82666545	chr14:82666545:A:T	rs1756356	A	T	A	Sox2_MA0143.3	6	1	-	9.019595766176417	2.110840986861197	CCATTGTC
chr14	82740766	82740767	chr14:82740767:A:T	rs1438272	A	T	A	Sox2_MA0143.3	-3	0	-	0	0	.
chr14	82954448	82954449	chr14:82954449:G:A	rs12590492	G	A	G	Sox2_MA0143.3	26	0	+	0	0	.
chr14	83343287	83343288	chr14:83343288:G:T	rs192223472	G	T	G	Sox2_MA0143.3	-12	0	+	0	0	.
chr14	83861664	83861665	chr14:83861665:T:G	rs4904142	T	G	T	Sox2_MA0143.3	-4	0	+	0	0	.
chr14	84042296	84042297	chr14:84042297:C:T	rs17729686	C	T	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr14	84299418	84299419	chr14:84299419:T:C	rs8009583	T	C	T	Sox2_MA0143.3	27	0	-	0	0	.
chr14	84399185	84399186	chr14:84399186:G:C	rs368206765	G	C	G	Sox2_MA0143.3	9	0	-	0	0	.
chr14	84572226	84572227	chr14:84572227:A:G	rs17796137	A	G	A	Sox2_MA0143.3	-8	0	-	0	0	.
chr14	84572231	84572232	chr14:84572232:G:A	rs2922635	G	A	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr14	84630802	84630803	chr14:84630803:T:C	rs17258171	T	C	C	Sox2_MA0143.3	12	0	-	0	0	.
chr14	84657885	84657886	chr14:84657886:A:G	rs1383776	A	G	A	Sox2_MA0143.3	2	1	-	8.864090315184848	2.5582713367092715	CCTTTGTG
chr14	84708844	84708845	chr14:84708845:G:A	rs1564526	G	A	G	Sox2_MA0143.3	17	0	+	0	0	.
chr14	85042277	85042278	chr14:85042278:T:C	rs17740194	T	C	T	Sox2_MA0143.3	2	1	-	9.613475778572903	3.494828071296623	CCATTGTT
chr14	85125563	85125564	chr14:85125564:T:C	rs1456515594	T	C	T	Sox2_MA0143.3	-16	0	+	0	0	.
chr14	85147006	85147007	chr14:85147007:C:T	rs1986620	C	T	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr14	85154154	85154155	chr14:85154155:A:G	rs10498580	A	G	A	Sox2_MA0143.3	-12	0	-	0	0	.
chr14	85453943	85453944	chr14:85453944:T:G	rs79381148	T	G	T	Sox2_MA0143.3	17	0	+	0	0	.
chr14	85512892	85512893	chr14:85512893:A:G	rs6574828	A	G	A	Sox2_MA0143.3	3	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr14	85520065	85520066	chr14:85520066:T:A	rs17710381	T	A	T	Sox2_MA0143.3	-8	0	-	0	0	.
chr14	85530202	85530203	chr14:85530203:G:T	rs150485276	G	T	G	Sox2_MA0143.3	11	0	+	0	0	.
chr14	85538985	85538986	chr14:85538986:G:A	rs144252521	G	A	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr14	85541786	85541787	chr14:85541787:G:A	rs115321687	G	A	G	Sox2_MA0143.3	8	0	+	0	0	.
chr14	85603284	85603285	chr14:85603285:G:A	rs9323769	G	A	g	Sox2_MA0143.3	-4	0	+	0	0	.
chr14	85813240	85813241	chr14:85813241:C:A	rs1951818	C	A	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr14	85893338	85893339	chr14:85893339:G:C	rs78097224	G	C	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr14	86094574	86094575	chr14:86094575:A:G	rs542563464	A	G	A	Sox2_MA0143.3	24	0	-	0	0	.
chr14	86300422	86300423	chr14:86300423:G:A	rs12890313	G	A	A	Sox2_MA0143.3	-8	0	-	0	0	.
chr14	86624173	86624174	chr14:86624174:G:C	rs7143247	G	C	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr14	86654717	86654718	chr14:86654718:A:T	rs112997198	A	T	A	Sox2_MA0143.3	21	0	+	0	0	.
chr14	86732264	86732265	chr14:86732265:T:C	rs56055505	T	C	T	Sox2_MA0143.3	19	0	-	0	0	.
chr14	86906039	86906040	chr14:86906040:A:G	rs4904352	A	G	G	Sox2_MA0143.3	10	0	-	0	0	.
chr14	86915657	86915658	chr14:86915658:C:G	rs17202751	C	G	C	Sox2_MA0143.3	1	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr14	87075369	87075370	chr14:87075370:T:C	rs8018896	T	C	T	Sox2_MA0143.3	-1	0	-	0	0	.
chr14	87183871	87183872	chr14:87183872:A:G	rs12890747	A	G	A	Sox2_MA0143.3	25	0	+	0	0	.
chr14	87474931	87474932	chr14:87474932:A:T	rs60860316	A	T	A	Sox2_MA0143.3	-15	0	+	0	0	.
chr14	87497541	87497542	chr14:87497542:A:G	rs10147514	A	G	G	Sox2_MA0143.3	27	0	+	0	0	.
chr14	87640726	87640727	chr14:87640727:G:A	rs8012254	G	A	A	Sox2_MA0143.3	9	0	-	0	0	.
chr14	87725848	87725849	chr14:87725849:T:C	rs1954066	T	C	T	Sox2_MA0143.3	4	1	+	9.800647049772198	2.8918922704569785	CCTTTGTT
chr14	87829636	87829637	chr14:87829637:C:T	rs61975613	C	T	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr14	87883719	87883720	chr14:87883720:G:A	rs1450708	G	A	A	Sox2_MA0143.3	-5	0	+	0	0	.
chr14	87895092	87895093	chr14:87895093:C:T	rs7152339	C	T	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr14	87993187	87993188	chr14:87993188:G:A	rs370990058	G	A	G	Sox2_MA0143.3	27	0	+	0	0	.
chr14	88109797	88109798	chr14:88109798:T:G	rs4301957	T	G	T	Sox2_MA0143.3	8	0	-	0	0	.
chr14	88130504	88130505	chr14:88130505:C:T	rs73320420	C	T	C	Sox2_MA0143.3	16	0	-	0	0	.
chr14	88194709	88194710	chr14:88194710:T:C	rs17124236	T	C	T	Sox2_MA0143.3	-16	0	-	0	0	.
chr14	88230504	88230505	chr14:88230505:C:T	rs6574999	C	T	T	Sox2_MA0143.3	-7	0	-	0	0	.
chr14	88234155	88234156	chr14:88234156:T:C	rs776819472	T	C	T	Sox2_MA0143.3	-16	0	+	0	0	.
chr14	88234173	88234174	chr14:88234174:T:C	rs11159849	T	C	T	Sox2_MA0143.3	2	1	+	9.800647049772198	3.494828071296623	CCTTTGTT
chr14	88333262	88333263	chr14:88333263:C:A	rs10141646	C	A	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr14	88360496	88360497	chr14:88360497:C:A	rs12586714	C	A	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr14	88604274	88604275	chr14:88604275:A:G	rs34947405	A	G	A	Sox2_MA0143.3	2	1	+	8.676919043985553	2.5582713367092715	CCATTGTG
chr14	88618509	88618510	chr14:88618510:G:A	rs28489684	G	A	G	Sox2_MA0143.3	27	0	-	0	0	.
chr14	88950026	88950027	chr14:88950027:G:A	rs10132345	G	A	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr14	89196546	89196547	chr14:89196547:C:T	rs10148147	C	T	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr14	89232484	89232485	chr14:89232485:C:T	rs12590871	C	T	C	Sox2_MA0143.3	22	0	-	0	0	.
chr14	89232511	89232512	chr14:89232512:G:A	rs778563887	G	A	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr14	89270902	89270903	chr14:89270903:C:T	rs189454497	C	T	T	Sox2_MA0143.3	12	0	-	0	0	.
chr14	89277815	89277816	chr14:89277816:T:C	rs76113866	T	C	T	Sox2_MA0143.3	25	0	-	0	0	.
chr14	89286621	89286622	chr14:89286622:A:C	rs9671408	A	C	C	Sox2_MA0143.3	-12	0	-	0	0	.
chr14	89287528	89287529	chr14:89287529:A:G	rs6575053	A	G	A	Sox2_MA0143.3	2	1	+	9.019595766176417	2.900948058900136	CCATTGTC
chr14	89325647	89325648	chr14:89325648:G:T	rs72701662	G	T	T	Sox2_MA0143.3	-13	0	+	0	0	.
chr14	89331724	89331725	chr14:89331725:T:C	rs60007302	T	C	T	Sox2_MA0143.3	25	0	-	0	0	.
chr14	89331735	89331736	chr14:89331736:T:C	rs8020090	T	C	T	Sox2_MA0143.3	14	0	-	0	0	.
chr14	89450922	89450923	chr14:89450923:A:G	rs34864187	A	G	G	Sox2_MA0143.3	3	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr14	89451314	89451315	chr14:89451315:A:G	rs80144595	A	G	A	Sox2_MA0143.3	-2	0	-	0	0	.
chr14	89464162	89464163	chr14:89464163:G:T	rs10083415	G	T	G	Sox2_MA0143.3	24	0	-	0	0	.
chr14	89493948	89493949	chr14:89493949:T:C	rs77010618	T	C	-	Sox2_MA0143.3	19	0	+	0	0	.
chr14	89721323	89721324	chr14:89721324:A:G	rs183358325	A	G	A	Sox2_MA0143.3	14	0	+	0	0	.
chr14	89810377	89810378	chr14:89810378:T:C	rs1111761	T	C	t	Sox2_MA0143.3	9	0	+	0	0	.
chr14	89831224	89831225	chr14:89831225:A:T	rs8016724	A	T	A	Sox2_MA0143.3	12	0	-	0	0	.
chr14	89872293	89872294	chr14:89872294:G:A	rs117884592	G	A	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr14	89956544	89956545	chr14:89956545:T:C	rs563588606	T	C	T	Sox2_MA0143.3	-6	0	+	0	0	.
chr14	89956573	89956574	chr14:89956574:G:T	rs28365053	G	T	A	Sox2_MA0143.3	23	0	+	0	0	.
chr14	89973188	89973189	chr14:89973189:C:A	rs35787421	C	A	A	Sox2_MA0143.3	-16	0	+	0	0	.
chr14	90077634	90077635	chr14:90077635:C:T	rs1286910	C	T	C	Sox2_MA0143.3	15	0	+	0	0	.
chr14	90088413	90088414	chr14:90088414:C:A	rs1023603351	C	A	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr14	90089636	90089637	chr14:90089637:A:G	rs56039212	A	G	A	Sox2_MA0143.3	-4	0	-	0	0	.
chr14	90164091	90164092	chr14:90164092:G:A	rs75916306	G	A	G	Sox2_MA0143.3	5	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr14	90170713	90170714	chr14:90170714:A:G	rs2151752	A	G	A	Sox2_MA0143.3	25	0	+	0	0	.
chr14	90290415	90290416	chr14:90290416:A:T	rs3742671	A	T	A	Sox2_MA0143.3	-10	0	-	0	0	.
chr14	90300820	90300821	chr14:90300821:G:T	rs57011283	G	T	G	Sox2_MA0143.3	27	0	-	0	0	.
chr14	90300830	90300831	chr14:90300831:T:C	rs59444150	T	C	C	Sox2_MA0143.3	17	0	-	0	0	.
chr14	90300862	90300863	chr14:90300863:G:A	rs545052176	G	A	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr14	90355456	90355457	chr14:90355457:C:T	rs4904679	C	T	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr14	90375991	90375992	chr14:90375992:T:C	rs111516069	T	C	T	Sox2_MA0143.3	25	0	+	0	0	.
chr14	90378400	90378401	chr14:90378401:A:T	rs191420006	A	T	A	Sox2_MA0143.3	-3	0	+	0	0	.
chr14	90417673	90417674	chr14:90417674:C:A	rs2098254	C	A	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr14	90423749	90423750	chr14:90423750:G:A	rs57936970	G	A	G	Sox2_MA0143.3	25	0	+	0	0	.
chr14	90449021	90449022	chr14:90449022:T:C	rs732171	T	C	T	Sox2_MA0143.3	2	1	+	9.206767037375712	2.900948058900136	CCTTTGTC
chr14	90449601	90449602	chr14:90449602:A:G	rs741099	A	G	A	Sox2_MA0143.3	2	1	-	9.800647049772198	3.494828071296623	CCTTTGTT
chr14	90454611	90454612	chr14:90454612:C:T	rs188065058	C	T	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr14	90455942	90455943	chr14:90455943:T:C	rs741102	T	C	T	Sox2_MA0143.3	2	1	-	9.019595766176417	2.900948058900136	CCATTGTC
chr14	90455959	90455960	chr14:90455960:C:T	rs12433543	C	T	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr14	90505726	90505727	chr14:90505727:T:C	rs17126831	T	C	C	Sox2_MA0143.3	13	0	+	0	0	.
chr14	90513734	90513735	chr14:90513735:C:T	rs770616650	C	T	C	Sox2_MA0143.3	25	0	-	0	0	.
chr14	90558449	90558450	chr14:90558450:G:A	rs150880390	G	A	G	Sox2_MA0143.3	16	0	-	0	0	.
chr14	90560878	90560879	chr14:90560879:C:T	rs11620666	C	T	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr14	90560887	90560888	chr14:90560888:G:T	rs11620738	G	T	G	Sox2_MA0143.3	7	1	+	8.864090315184848	9.800647049772198	CCTTTGTG
chr14	90607226	90607227	chr14:90607227:T:C	rs76456082	T	C	T	Sox2_MA0143.3	16	0	-	0	0	.
chr14	90612965	90612966	chr14:90612966:C:T	rs7145137	C	T	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr14	90621608	90621609	chr14:90621609:G:A	rs4904711	G	A	G	Sox2_MA0143.3	17	0	-	0	0	.
chr14	90630464	90630465	chr14:90630465:C:T	rs11627815	C	T	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr14	90675083	90675084	chr14:90675084:A:G	rs12894664	A	G	G	Sox2_MA0143.3	9	0	-	0	0	.
chr14	90732958	90732959	chr14:90732959:C:G	rs74084314	C	G	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr14	90796814	90796815	chr14:90796815:C:T	rs11629240	C	T	C	Sox2_MA0143.3	10	0	+	0	0	.
chr14	90801521	90801522	chr14:90801522:A:G	rs1286328	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr14	90969360	90969361	chr14:90969361:C:T	rs3783832	C	T	T	Sox2_MA0143.3	-20	0	+	0	0	.
chr14	90980039	90980040	chr14:90980040:T:C	rs1286077	T	C	C	Sox2_MA0143.3	-5	0	-	0	0	.
chr14	91124643	91124644	chr14:91124644:A:G	rs4900070	A	G	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr14	91171096	91171097	chr14:91171097:C:G	rs568728875	C	G	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr14	91171354	91171355	chr14:91171355:G:A	rs555108874	G	A	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr14	91269647	91269648	chr14:91269648:G:C	rs117604919	G	C	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr14	91285209	91285210	chr14:91285210:A:G	rs115153931	A	G	A	Sox2_MA0143.3	-4	0	-	0	0	.
chr14	91332333	91332334	chr14:91332334:C:T	rs967134342	C	T	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr14	91405587	91405588	chr14:91405588:C:A	rs1285831	C	A	C	Sox2_MA0143.3	8	0	-	0	0	.
chr14	91408480	91408481	chr14:91408481:G:C	rs77555856	G	C	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr14	91413745	91413746	chr14:91413746:G:A	rs11851555	G	A	G	Sox2_MA0143.3	13	0	-	0	0	.
chr14	91413767	91413768	chr14:91413768:A:G	rs11851474	A	G	A	Sox2_MA0143.3	-9	0	-	0	0	.
chr14	91413773	91413774	chr14:91413774:G:A	rs116895974	G	A	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr14	91417579	91417580	chr14:91417580:T:C	chr14:91417580:T:C	T	C	T	Sox2_MA0143.3	27	0	-	0	0	.
chr14	91417622	91417623	chr14:91417623:G:T	rs3742654	G	T	G	Sox2_MA0143.3	-16	0	-	0	0	.
chr14	91417828	91417829	chr14:91417829:C:T	chr14:91417829:C:T	C	T	c	Sox2_MA0143.3	-10	0	-	0	0	.
chr14	91425934	91425935	chr14:91425935:C:G	rs148468941	C	G	C	Sox2_MA0143.3	12	0	+	0	0	.
chr14	91575611	91575612	chr14:91575612:C:G	rs1704612	C	G	C	Sox2_MA0143.3	5	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr14	91731699	91731700	chr14:91731700:A:G	rs10162471	A	G	A	Sox2_MA0143.3	-3	0	+	0	0	.
chr14	91866128	91866129	chr14:91866129:A:G	rs116222190	A	G	A	Sox2_MA0143.3	-4	0	+	0	0	.
chr14	91927965	91927966	chr14:91927966:G:A	rs2430373	G	A	G	Sox2_MA0143.3	16	0	-	0	0	.
chr14	92033663	92033664	chr14:92033664:T:C	rs7160034	T	C	T	Sox2_MA0143.3	-2	0	-	0	0	.
chr14	92039570	92039571	chr14:92039571:T:A	rs17127898	T	A	T	Sox2_MA0143.3	-9	0	+	0	0	.
chr14	92245077	92245078	chr14:92245078:C:T	rs61977761	C	T	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr14	92353513	92353514	chr14:92353514:T:C	rs75215137	T	C	T	Sox2_MA0143.3	4	1	+	9.206767037375712	2.2980122580604916	CCTTTGTC
chr14	92425597	92425598	chr14:92425598:C:T	rs10431740	C	T	C	Sox2_MA0143.3	22	0	+	0	0	.
chr14	92453159	92453160	chr14:92453160:C:G	rs7149030	C	G	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr14	92482063	92482064	chr14:92482064:G:T	rs2149055	G	T	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr14	92526991	92526992	chr14:92526992:A:C	rs7160605	A	C	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr14	92565062	92565063	chr14:92565063:C:T	rs943668	C	T	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr14	92565068	92565069	chr14:92565069:T:C	rs8018809	T	C	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr14	92655379	92655380	chr14:92655380:A:G	rs61992602	A	G	-	Sox2_MA0143.3	3	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr14	92704647	92704648	chr14:92704648:C:T	rs9791	C	T	C	Sox2_MA0143.3	21	0	-	0	0	.
chr14	92724437	92724438	chr14:92724438:G:A	rs3783932	G	A	G	Sox2_MA0143.3	16	0	+	0	0	.
chr14	92775587	92775588	chr14:92775588:C:T	rs79207347	C	T	C	Sox2_MA0143.3	19	0	-	0	0	.
chr14	92775593	92775594	chr14:92775594:A:C	rs144700770	A	C	A	Sox2_MA0143.3	13	0	-	0	0	.
chr14	92775597	92775598	chr14:92775598:A:G	rs138372989	A	G	A	Sox2_MA0143.3	9	0	-	0	0	.
chr14	92937802	92937803	chr14:92937803:C:T	rs2281512	C	T	C	Sox2_MA0143.3	19	0	+	0	0	.
chr14	92959050	92959051	chr14:92959051:C:T	rs564185627	C	T	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr14	93009598	93009599	chr14:93009599:T:C	chr14:93009599:T:C	T	C	T	Sox2_MA0143.3	-6	0	-	0	0	.
chr14	93010160	93010161	chr14:93010161:G:A	rs7141085	G	A	G	Sox2_MA0143.3	16	0	-	0	0	.
chr14	93015865	93015866	chr14:93015866:T:C	rs3783905	T	C	T	Sox2_MA0143.3	4	1	+	9.206767037375712	2.2980122580604916	CCTTTGTC
chr14	93019443	93019444	chr14:93019444:C:G	rs76805139	C	G	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr14	93019481	93019482	chr14:93019482:A:G	chr14:93019482:A:G	A	G	A	Sox2_MA0143.3	20	0	+	0	0	.
chr14	93037193	93037194	chr14:93037194:C:T	rs79950451	C	T	C	Sox2_MA0143.3	10	0	-	0	0	.
chr14	93048534	93048535	chr14:93048535:A:G	rs1740592	A	G	G	Sox2_MA0143.3	9	0	+	0	0	.
chr14	93050098	93050099	chr14:93050099:G:A	rs59208530	G	A	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr14	93050102	93050103	chr14:93050103:G:A	rs182777131	G	A	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr14	93062867	93062868	chr14:93062868:A:C	rs1740691	A	C	C	Sox2_MA0143.3	10	0	-	0	0	.
chr14	93074315	93074316	chr14:93074316:C:T	rs77300966	C	T	C	Sox2_MA0143.3	19	0	-	0	0	.
chr14	93077828	93077829	chr14:93077829:C:T	rs1740689	C	T	T	Sox2_MA0143.3	26	0	+	0	0	.
chr14	93104558	93104559	chr14:93104559:C:T	chr14:93104559:C:T	C	T	C	Sox2_MA0143.3	-20	0	-	0	0	.
chr14	93156952	93156953	chr14:93156953:G:A	rs12432447	G	A	G	Sox2_MA0143.3	14	0	+	0	0	.
chr14	93208199	93208200	chr14:93208200:G:T	rs80003055	G	T	G	Sox2_MA0143.3	18	0	-	0	0	.
chr14	93303875	93303876	chr14:93303876:A:C	rs10129515	A	C	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr14	93333641	93333642	chr14:93333642:A:G	rs71429792	A	G	A	Sox2_MA0143.3	2	1	-	9.800647049772198	3.494828071296623	CCTTTGTT
chr14	93333829	93333830	chr14:93333830:T:C	rs7155081	T	C	T	Sox2_MA0143.3	9	0	+	0	0	.
chr14	93490236	93490237	chr14:93490237:C:T	rs12434250	C	T	C	Sox2_MA0143.3	18	0	+	0	0	.
chr14	93490237	93490238	chr14:93490238:C:T	rs12434251	C	T	C	Sox2_MA0143.3	19	0	+	0	0	.
chr14	93490243	93490244	chr14:93490244:G:A	rs28506855	G	A	G	Sox2_MA0143.3	25	0	+	0	0	.
chr14	93510276	93510277	chr14:93510277:A:G	rs2146509	A	G	A	Sox2_MA0143.3	-11	0	+	0	0	.
chr14	93721485	93721486	chr14:93721486:C:T	rs1887197	C	T	C	Sox2_MA0143.3	14	0	+	0	0	.
chr14	93735323	93735324	chr14:93735324:C:T	rs12432999	C	T	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr14	93744317	93744318	chr14:93744318:T:C	rs11160138	T	C	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr14	93744325	93744326	chr14:93744326:C:A	rs11160139	C	A	A	Sox2_MA0143.3	-6	0	+	0	0	.
chr14	93753386	93753387	chr14:93753387:C:T	rs4905085	C	T	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr14	93758031	93758032	chr14:93758032:A:C	rs7140229	A	C	C	Sox2_MA0143.3	26	0	+	0	0	.
chr14	93778656	93778657	chr14:93778657:C:T	rs115454434	C	T	C	Sox2_MA0143.3	12	0	+	0	0	.
chr14	93790655	93790656	chr14:93790656:T:C	rs941707	T	C	T	Sox2_MA0143.3	4	1	+	8.864090315184848	1.9553355358696274	CCTTTGTG
chr14	93850226	93850227	chr14:93850227:T:A	rs76554275	T	A	T	Sox2_MA0143.3	3	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr14	93904152	93904153	chr14:93904153:T:C	rs371867398	T	C	T	Sox2_MA0143.3	2	1	-	9.019595766176417	2.900948058900136	CCATTGTC
chr14	93940574	93940575	chr14:93940575:C:A	rs140178334	C	A	C	Sox2_MA0143.3	18	0	+	0	0	.
chr14	93956276	93956277	chr14:93956277:A:T	rs941483	A	T	A	Sox2_MA0143.3	23	0	-	0	0	.
chr14	93967240	93967241	chr14:93967241:T:C	rs4900208	T	C	C	Sox2_MA0143.3	6	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr14	93981167	93981168	chr14:93981168:C:T	rs764433779	C	T	C	Sox2_MA0143.3	26	0	-	0	0	.
chr14	93985027	93985028	chr14:93985028:A:G	rs113391426	A	G	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr14	93985032	93985033	chr14:93985033:G:T	rs192049179	G	T	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr14	94001831	94001832	chr14:94001832:A:G	rs118003358	A	G	A	Sox2_MA0143.3	4	1	-	9.206767037375712	2.2980122580604916	CCTTTGTC
chr14	94028642	94028643	chr14:94028643:A:G	rs8023082	A	G	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr14	94037035	94037036	chr14:94037036:G:A	rs11624273	G	A	G	Sox2_MA0143.3	24	0	-	0	0	.
chr14	94056136	94056137	chr14:94056137:A:C	rs10142741	A	C	A	Sox2_MA0143.3	-20	0	-	0	0	.
chr14	94080536	94080537	chr14:94080537:C:G	rs942370991	C	G	C	Sox2_MA0143.3	16	0	-	0	0	.
chr14	94132545	94132546	chr14:94132546:T:C	rs899470083	T	C	.	Sox2_MA0143.3	-19	0	+	0	0	.
chr14	94143591	94143592	chr14:94143592:T:G	rs1254820479	T	G	T	Sox2_MA0143.3	15	0	+	0	0	.
chr14	94146038	94146039	chr14:94146039:C:G	rs10149390	C	G	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr14	94146050	94146051	chr14:94146051:T:A	rs8019520	T	A	T	Sox2_MA0143.3	-19	0	-	0	0	.
chr14	94182066	94182067	chr14:94182067:C:T	rs11160163	C	T	C	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr14	94325263	94325264	chr14:94325264:T:A	rs6575415	T	A	T	Sox2_MA0143.3	21	0	+	0	0	.
chr14	94344825	94344826	chr14:94344826:T:C	rs1815228	T	C	-	Sox2_MA0143.3	-10	0	+	0	0	.
chr14	94357479	94357480	chr14:94357480:T:C	rs2736898	T	C	T	Sox2_MA0143.3	-6	0	+	0	0	.
chr14	94363585	94363586	chr14:94363586:G:A	rs56045385	G	A	-	Sox2_MA0143.3	1	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr14	94378505	94378506	chr14:94378506:T:G	rs1303	T	G	T	Sox2_MA0143.3	22	0	-	0	0	.
chr14	94423573	94423574	chr14:94423574:C:T	rs7151244	C	T	T	Sox2_MA0143.3	25	0	-	0	0	.
chr14	94423594	94423595	chr14:94423595:A:C	rs7151095	A	C	C	Sox2_MA0143.3	4	1	-	8.676919043985553	1.7681642646703322	CCATTGTG
chr14	94426571	94426572	chr14:94426572:A:C	rs12895440	A	C	A	Sox2_MA0143.3	24	0	-	0	0	.
chr14	94426575	94426576	chr14:94426576:G:A	rs56019583	G	A	G	Sox2_MA0143.3	20	0	-	0	0	.
chr14	94461296	94461297	chr14:94461297:A:G	rs76860132	A	G	A	Sox2_MA0143.3	-4	0	+	0	0	.
chr14	94470626	94470627	chr14:94470627:T:C	rs8014978	T	C	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr14	94561506	94561507	chr14:94561507:C:T	rs882731	C	T	C	Sox2_MA0143.3	11	0	-	0	0	.
chr14	94570255	94570256	chr14:94570256:A:G	rs1007148	A	G	A	Sox2_MA0143.3	3	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr14	94572030	94572031	chr14:94572031:C:T	rs10149354	C	T	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr14	94575140	94575141	chr14:94575141:G:A	rs1955652	G	A	A	Sox2_MA0143.3	7	1	+	8.864090315184848	3.5547341015215945	CCTTTGTG
chr14	94586195	94586196	chr14:94586196:G:T	rs2069961	G	T	G	Sox2_MA0143.3	12	0	-	0	0	.
chr14	94595583	94595584	chr14:94595584:C:T	rs77082886	C	T	C	Sox2_MA0143.3	24	0	+	0	0	.
chr14	94634437	94634438	chr14:94634438:G:A	rs12885659	G	A	G	Sox2_MA0143.3	-5	0	+	0	0	.
chr14	94639239	94639240	chr14:94639240:T:C	rs10150203	T	C	C	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr14	94676607	94676608	chr14:94676608:G:A	rs559211505	G	A	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr14	94676627	94676628	chr14:94676628:G:C	rs11850126	G	C	C	Sox2_MA0143.3	14	0	+	0	0	.
chr14	94676807	94676808	chr14:94676808:T:C	rs11846256	T	C	T	Sox2_MA0143.3	-4	0	+	0	0	.
chr14	94729342	94729343	chr14:94729343:A:C	rs17091360	A	C	A	Sox2_MA0143.3	12	0	+	0	0	.
chr14	94748438	94748439	chr14:94748439:T:C	rs7157500	T	C	C	Sox2_MA0143.3	-12	0	-	0	0	.
chr14	94814254	94814255	chr14:94814255:T:G	rs10147231	T	G	T	Sox2_MA0143.3	6	1	+	9.613475778572903	2.7047209992576837	CCATTGTT
chr14	95052875	95052876	chr14:95052876:A:G	rs2353730	A	G	G	Sox2_MA0143.3	19	0	+	0	0	.
chr14	95056496	95056497	chr14:95056497:G:A	rs11621737	G	A	G	Sox2_MA0143.3	21	0	-	0	0	.
chr14	95144310	95144311	chr14:95144311:T:G	rs78987194	T	G	T	Sox2_MA0143.3	-10	0	+	0	0	.
chr14	95157819	95157820	chr14:95157820:G:A	rs1467223453	G	A	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr14	95157820	95157821	chr14:95157821:A:C	chr14:95157821:A:C	A	C	A	Sox2_MA0143.3	-7	0	+	0	0	.
chr14	95157834	95157835	chr14:95157835:T:C	chr14:95157835:T:C	T	C	T	Sox2_MA0143.3	7	1	+	9.613475778572903	9.019595766176417	CCATTGTT
chr14	95157852	95157853	chr14:95157853:C:T	rs768363243	C	T	C	Sox2_MA0143.3	25	0	+	0	0	.
chr14	95197814	95197815	chr14:95197815:T:C	rs28645288	T	C	T	Sox2_MA0143.3	-13	0	+	0	0	.
chr14	95199519	95199520	chr14:95199520:C:T	rs1187626	C	T	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr14	95208885	95208886	chr14:95208886:A:G	rs10147447	A	G	A	Sox2_MA0143.3	18	0	+	0	0	.
chr14	95225609	95225610	chr14:95225610:C:A	rs78443435	C	A	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr14	95260803	95260804	chr14:95260804:A:G	rs117793900	A	G	A	Sox2_MA0143.3	11	0	+	0	0	.
chr14	95288484	95288485	chr14:95288485:A:G	rs116973276	A	G	A	Sox2_MA0143.3	-6	0	-	0	0	.
chr14	95307773	95307774	chr14:95307774:T:C	rs75723318	T	C	T	Sox2_MA0143.3	-18	0	+	0	0	.
chr14	95310791	95310792	chr14:95310792:C:T	rs1433480411	C	T	C	Sox2_MA0143.3	11	0	-	0	0	.
chr14	95340415	95340416	chr14:95340416:G:A	rs4905293	G	A	G	Sox2_MA0143.3	25	0	-	0	0	.
chr14	95340532	95340533	chr14:95340533:G:A	rs79960119	G	A	G	Sox2_MA0143.3	8	0	-	0	0	.
chr14	95346784	95346785	chr14:95346785:G:A	rs575572913	G	A	G	Sox2_MA0143.3	17	0	-	0	0	.
chr14	95346820	95346821	chr14:95346821:G:A	rs4489935	G	A	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr14	95374134	95374135	chr14:95374135:A:G	rs377295846	A	G	A	Sox2_MA0143.3	-1	0	-	0	0	.
chr14	95374138	95374139	chr14:95374139:C:A	rs1187716	C	A	A	Sox2_MA0143.3	-5	0	-	0	0	.
chr14	95385103	95385104	chr14:95385104:G:A	rs3889417	G	A	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr14	95405566	95405567	chr14:95405567:T:G	rs17828361	T	G	T	Sox2_MA0143.3	10	0	-	0	0	.
chr14	95427227	95427228	chr14:95427228:C:T	rs116753543	C	T	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr14	95434414	95434415	chr14:95434415:A:G	rs7153892	A	G	A	Sox2_MA0143.3	-19	0	-	0	0	.
chr14	95463862	95463863	chr14:95463863:C:A	rs3783290	C	A	A	Sox2_MA0143.3	11	0	+	0	0	.
chr14	95468948	95468949	chr14:95468949:G:A	rs74080782	G	A	A	Sox2_MA0143.3	-10	0	+	0	0	.
chr14	95471323	95471324	chr14:95471324:G:C	rs8015793	G	C	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr14	95495505	95495506	chr14:95495506:T:C	rs6575515	T	C	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr14	95495507	95495508	chr14:95495508:G:T	rs6575516	G	T	T	Sox2_MA0143.3	-15	0	-	0	0	.
chr14	95496947	95496948	chr14:95496948:T:C	rs150505944	T	C	T	Sox2_MA0143.3	9	0	+	0	0	.
chr14	95497152	95497153	chr14:95497153:C:A	rs35898659	C	A	C	Sox2_MA0143.3	23	0	-	0	0	.
chr14	95512467	95512468	chr14:95512468:G:C	rs8008011	G	C	C	Sox2_MA0143.3	1	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr14	95513117	95513118	chr14:95513118:G:A	rs179153	G	A	A	Sox2_MA0143.3	-18	0	+	0	0	.
chr14	95524273	95524274	chr14:95524274:T:C	rs179139	T	C	C	Sox2_MA0143.3	23	0	+	0	0	.
chr14	95527048	95527049	chr14:95527049:A:C	rs12431494	A	C	A	Sox2_MA0143.3	-4	0	-	0	0	.
chr14	95669519	95669520	chr14:95669520:C:T	rs1748965	C	T	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr14	95681449	95681450	chr14:95681450:C:G	rs78778698	C	G	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr14	95921043	95921044	chr14:95921044:G:A	rs184971397	G	A	G	Sox2_MA0143.3	-11	0	+	0	0	.
chr14	95959442	95959443	chr14:95959443:G:A	rs1122359	G	A	G	Sox2_MA0143.3	13	0	+	0	0	.
chr14	95979763	95979764	chr14:95979764:C:T	rs7142065	C	T	C	Sox2_MA0143.3	17	0	-	0	0	.
chr14	96055997	96055998	chr14:96055998:A:G	rs11849028	A	G	A	Sox2_MA0143.3	14	0	+	0	0	.
chr14	96097955	96097956	chr14:96097956:G:T	rs4905430	G	T	G	Sox2_MA0143.3	5	1	+	9.206767037375712	2.298012258060492	CCTTTGTC
chr14	96146271	96146272	chr14:96146272:G:A	rs72704813	G	A	G	Sox2_MA0143.3	5	1	+	9.613475778572903	2.7047209992576837	CCATTGTT
chr14	96149478	96149479	chr14:96149479:C:T	rs75313630	C	T	C	Sox2_MA0143.3	1	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr14	96191851	96191852	chr14:96191852:G:A	rs2001646	G	A	G	Sox2_MA0143.3	10	0	+	0	0	.
chr14	96191866	96191867	chr14:96191867:G:A	rs11847463	G	A	G	Sox2_MA0143.3	25	0	+	0	0	.
chr14	96192256	96192257	chr14:96192257:C:G	rs78987249	C	G	C	Sox2_MA0143.3	7	1	-	8.864090315184848	9.206767037375712	CCTTTGTG
chr14	96192258	96192259	chr14:96192259:C:T	rs59375265	C	T	C	Sox2_MA0143.3	5	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr14	96192280	96192281	chr14:96192281:G:T	rs116889083	G	T	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr14	96224991	96224992	chr14:96224992:G:A	rs77416637	G	A	G	Sox2_MA0143.3	-9	0	+	0	0	.
chr14	96262415	96262416	chr14:96262416:A:G	rs12050217	A	G	A	Sox2_MA0143.3	16	0	-	0	0	.
chr14	96262432	96262433	chr14:96262433:C:G	rs76210574	C	G	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr14	96363895	96363896	chr14:96363896:A:T	chr14:96363896:A:T	A	T	A	Sox2_MA0143.3	8	0	+	0	0	.
chr14	96459645	96459646	chr14:96459646:T:C	rs7140770	T	C	C	Sox2_MA0143.3	27	0	+	0	0	.
chr14	96468587	96468588	chr14:96468588:C:A	rs60811930	C	A	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr14	96501252	96501253	chr14:96501253:C:T	rs149077193	C	T	C	Sox2_MA0143.3	15	0	+	0	0	.
chr14	96593507	96593508	chr14:96593508:G:A	rs61983078	G	A	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr14	96593512	96593513	chr14:96593513:T:C	rs61983079	T	C	T	Sox2_MA0143.3	4	1	+	3.5547341015215945	-3.3540206777936254	CCTTTGTA
chr14	96624650	96624651	chr14:96624651:A:G	rs17094214	A	G	A	Sox2_MA0143.3	4	1	-	9.206767037375712	2.2980122580604916	CCTTTGTC
chr14	96707055	96707056	chr14:96707056:T:C	rs12890486	T	C	T	Sox2_MA0143.3	-19	0	+	0	0	.
chr14	96748855	96748856	chr14:96748856:A:C	rs55831245	A	C	A	Sox2_MA0143.3	26	0	-	0	0	.
chr14	96855351	96855352	chr14:96855352:C:T	rs2230532	C	T	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr14	96863812	96863813	chr14:96863813:T:C	rs12882853	T	C	C	Sox2_MA0143.3	27	0	+	0	0	.
chr14	96898898	96898899	chr14:96898899:A:C	rs4905565	A	C	C	Sox2_MA0143.3	11	0	-	0	0	.
chr14	96986306	96986307	chr14:96986307:T:C	rs74076840	T	C	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr14	97061517	97061518	chr14:97061518:C:T	rs17094897	C	T	C	Sox2_MA0143.3	-5	0	-	0	0	.
chr14	97362268	97362269	chr14:97362269:A:G	rs7155213	A	G	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr14	97393936	97393937	chr14:97393937:G:C	rs7156384	G	C	G	Sox2_MA0143.3	13	0	+	0	0	.
chr14	97416963	97416964	chr14:97416964:A:G	rs11624413	A	G	A	Sox2_MA0143.3	-20	0	+	0	0	.
chr14	97772634	97772635	chr14:97772635:A:G	rs113185007	A	G	A	Sox2_MA0143.3	-9	0	-	0	0	.
chr14	97789356	97789357	chr14:97789357:A:T	rs36118640	A	T	A	Sox2_MA0143.3	18	0	+	0	0	.
chr14	97793599	97793600	chr14:97793600:T:C	rs76216900	T	C	T	Sox2_MA0143.3	-3	0	+	0	0	.
chr14	97931141	97931142	chr14:97931142:C:G	rs12588117	C	G	C	Sox2_MA0143.3	9	0	+	0	0	.
chr14	97949128	97949129	chr14:97949129:A:G	rs12588317	A	G	A	Sox2_MA0143.3	10	0	+	0	0	.
chr14	98015082	98015083	chr14:98015083:T:C	rs9323979	T	C	T	Sox2_MA0143.3	13	0	+	0	0	.
chr14	98015088	98015089	chr14:98015089:T:G	rs9323980	T	G	T	Sox2_MA0143.3	19	0	+	0	0	.
chr14	98173481	98173482	chr14:98173482:G:A	rs562052494	G	A	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr14	98228302	98228303	chr14:98228303:A:T	rs1954556	A	T	A	Sox2_MA0143.3	-6	0	+	0	0	.
chr14	98270287	98270288	chr14:98270288:T:A	rs7154141	T	A	T	Sox2_MA0143.3	-7	0	+	0	0	.
chr14	98345340	98345341	chr14:98345341:T:C	rs4905673	T	C	T	Sox2_MA0143.3	25	0	+	0	0	.
chr14	98345829	98345830	chr14:98345830:A:C	rs8016542	A	C	A	Sox2_MA0143.3	2	1	-	9.206767037375712	2.900948058900136	CCTTTGTC
chr14	98350620	98350621	chr14:98350621:G:A	rs10139290	G	A	G	Sox2_MA0143.3	-14	0	+	0	0	.
chr14	98416390	98416391	chr14:98416391:G:T	rs76663139	G	T	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr14	98416391	98416392	chr14:98416392:A:T	rs74415430	A	T	A	Sox2_MA0143.3	-2	0	-	0	0	.
chr14	98477231	98477232	chr14:98477232:C:T	rs8021007	C	T	T	Sox2_MA0143.3	25	0	-	0	0	.
chr14	98494678	98494679	chr14:98494679:G:A	rs118076011	G	A	G	Sox2_MA0143.3	24	0	+	0	0	.
chr14	98548794	98548795	chr14:98548795:G:A	rs11845429	G	A	A	Sox2_MA0143.3	5	1	+	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr14	98586425	98586426	chr14:98586426:G:A	rs73401572	G	A	A	Sox2_MA0143.3	-1	0	-	0	0	.
chr14	98586437	98586438	chr14:98586438:A:G	rs74078053	A	G	A	Sox2_MA0143.3	-13	0	-	0	0	.
chr14	98634188	98634189	chr14:98634189:G:A	rs8012851	G	A	G	Sox2_MA0143.3	1	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr14	98829082	98829083	chr14:98829083:G:A	rs145442547	G	A	G	Sox2_MA0143.3	1	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr14	98896472	98896473	chr14:98896473:G:T	rs55770721	G	T	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr14	98909356	98909357	chr14:98909357:T:G	rs7141982	T	G	T	Sox2_MA0143.3	2	1	-	9.019595766176417	2.900948058900136	CCATTGTC
chr14	98909360	98909361	chr14:98909361:A:C	rs7140559	A	C	A	Sox2_MA0143.3	-2	0	-	0	0	.
chr14	99014886	99014887	chr14:99014887:A:G	rs10137107	A	G	A	Sox2_MA0143.3	8	0	-	0	0	.
chr14	99015599	99015600	chr14:99015600:C:G	rs77091692	C	G	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr14	99015635	99015636	chr14:99015636:C:T	rs11624936	C	T	C	Sox2_MA0143.3	23	0	+	0	0	.
chr14	99025365	99025366	chr14:99025366:G:C	rs11844359	G	C	G	Sox2_MA0143.3	18	0	-	0	0	.
chr14	99048959	99048960	chr14:99048960:G:A	rs1257581	G	A	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr14	99048962	99048963	chr14:99048963:G:A	rs78461420	G	A	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr14	99099145	99099146	chr14:99099146:C:T	rs28548282	C	T	T	Sox2_MA0143.3	16	0	-	0	0	.
chr14	99182156	99182157	chr14:99182157:C:A	rs17098348	C	A	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr14	99245820	99245821	chr14:99245821:C:G	rs538379010	C	G	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr14	99261253	99261254	chr14:99261254:A:G	rs10147094	A	G	A	Sox2_MA0143.3	17	0	+	0	0	.
chr14	99261254	99261255	chr14:99261255:A:G	rs7152245	A	G	A	Sox2_MA0143.3	18	0	+	0	0	.
chr14	99293859	99293860	chr14:99293860:G:C	rs7159452	G	C	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr14	99319220	99319221	chr14:99319221:T:G	rs72702686	T	G	T	Sox2_MA0143.3	-6	0	-	0	0	.
chr14	99422823	99422824	chr14:99422824:C:T	rs56055510	C	T	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr14	99431341	99431342	chr14:99431342:C:T	rs916772759	C	T	C	Sox2_MA0143.3	0	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr14	99539675	99539676	chr14:99539676:T:C	rs7147933	T	C	C	Sox2_MA0143.3	2	1	-	8.676919043985553	2.5582713367092715	CCATTGTG
chr14	99571158	99571159	chr14:99571159:T:C	rs2400753	T	C	C	Sox2_MA0143.3	-20	0	-	0	0	.
chr14	99571159	99571160	chr14:99571160:G:A	rs2400754	G	A	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr14	99581753	99581754	chr14:99581754:T:C	rs941556	T	C	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr14	99754177	99754178	chr14:99754178:T:C	rs28485894	T	C	T	Sox2_MA0143.3	7	1	+	9.800647049772198	9.206767037375712	CCTTTGTT
chr14	99754193	99754194	chr14:99754194:C:G	rs58375254	C	G	C	Sox2_MA0143.3	23	0	+	0	0	.
chr14	99779798	99779799	chr14:99779799:C:G	rs2146239	C	G	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr14	99779826	99779827	chr14:99779827:C:T	rs114875879	C	T	C	Sox2_MA0143.3	16	0	+	0	0	.
chr14	99865538	99865539	chr14:99865539:T:C	rs11160553	T	C	T	Sox2_MA0143.3	23	0	-	0	0	.
chr14	99880630	99880631	chr14:99880631:G:A	rs1191113	G	A	G	Sox2_MA0143.3	11	0	+	0	0	.
chr14	99931980	99931981	chr14:99931981:C:T	rs7157261	C	T	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr14	99939419	99939420	chr14:99939420:C:T	rs2236282	C	T	T	Sox2_MA0143.3	21	0	-	0	0	.
chr14	100040118	100040119	chr14:100040119:G:A	rs79446734	G	A	G	Sox2_MA0143.3	7	1	+	8.864090315184848	3.5547341015215945	CCTTTGTG
chr14	100115405	100115406	chr14:100115406:G:C	rs12435526	G	C	G	Sox2_MA0143.3	-5	0	+	0	0	.
chr14	100146755	100146756	chr14:100146756:C:T	rs2236317	C	T	C	Sox2_MA0143.3	-20	0	-	0	0	.
chr14	100155322	100155323	chr14:100155323:C:T	rs142798233	C	T	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr14	100199678	100199679	chr14:100199679:G:A	rs185955928	G	A	g	Sox2_MA0143.3	-10	0	-	0	0	.
chr14	100285287	100285288	chr14:100285288:T:C	rs11850670	T	C	c	Sox2_MA0143.3	6	1	+	9.206767037375712	2.298012258060492	CCTTTGTC
chr14	100301731	100301732	chr14:100301732:G:T	rs8019885	G	T	T	Sox2_MA0143.3	23	0	+	0	0	.
chr14	100348506	100348507	chr14:100348507:C:G	chr14:100348507:C:G	C	G	C	Sox2_MA0143.3	18	0	-	0	0	.
chr14	100391185	100391186	chr14:100391186:A:G	rs8005949	A	G	G	Sox2_MA0143.3	15	0	+	0	0	.
chr14	100544392	100544393	chr14:100544393:T:C	rs11628341	T	C	C	Sox2_MA0143.3	13	0	-	0	0	.
chr14	100594933	100594934	chr14:100594934:C:T	rs4905978	C	T	C	Sox2_MA0143.3	0	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr14	100613521	100613522	chr14:100613522:T:C	rs1190881	T	C	C	Sox2_MA0143.3	8	0	+	0	0	.
chr14	100613536	100613537	chr14:100613537:C:T	rs12882635	C	T	C	Sox2_MA0143.3	23	0	+	0	0	.
chr14	100617605	100617606	chr14:100617606:G:A	rs375569126	G	A	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr14	100617620	100617621	chr14:100617621:C:A	rs911324	C	A	C	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr14	100624823	100624824	chr14:100624824:T:C	rs117159658	T	C	T	Sox2_MA0143.3	3	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr14	100628844	100628845	chr14:100628845:G:C	rs1190895	G	C	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr14	100672669	100672670	chr14:100672670:T:C	rs12892787	T	C	T	Sox2_MA0143.3	15	0	+	0	0	.
chr14	100680534	100680535	chr14:100680535:T:G	rs548590000	T	G	T	Sox2_MA0143.3	-16	0	+	0	0	.
chr14	100726479	100726480	chr14:100726480:C:T	rs28362567	C	T	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr14	100736656	100736657	chr14:100736657:C:T	rs77474161	C	T	C	Sox2_MA0143.3	25	0	+	0	0	.
chr14	100755604	100755605	chr14:100755605:T:C	rs4906007	T	C	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr14	100767667	100767668	chr14:100767668:G:A	rs58540528	G	A	G	Sox2_MA0143.3	-9	0	+	0	0	.
chr14	100804987	100804988	chr14:100804988:A:T	rs11623549	A	T	A	Sox2_MA0143.3	25	0	-	0	0	.
chr14	100827190	100827191	chr14:100827191:A:C	rs10134980	A	C	C	Sox2_MA0143.3	8	0	+	0	0	.
chr14	100892667	100892668	chr14:100892668:C:T	rs79902510	C	T	C	Sox2_MA0143.3	8	0	-	0	0	.
chr14	100898927	100898928	chr14:100898928:C:A	rs2180386	C	A	A	Sox2_MA0143.3	-12	0	+	0	0	.
chr14	100945615	100945616	chr14:100945616:A:G	rs12433065	A	G	A	Sox2_MA0143.3	4	1	-	9.800647049772198	2.8918922704569785	CCTTTGTT
chr14	101007744	101007745	chr14:101007745:G:A	rs1337880871	G	A	G	Sox2_MA0143.3	18	0	-	0	0	.
chr14	101024854	101024855	chr14:101024855:C:T	rs375378221	C	T	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr14	101024891	101024892	chr14:101024892:C:T	rs74080300	C	T	T	Sox2_MA0143.3	26	0	+	0	0	.
chr14	101037783	101037784	chr14:101037784:T:C	rs74479777	T	C	T	Sox2_MA0143.3	-7	0	-	0	0	.
chr14	101046634	101046635	chr14:101046635:C:T	rs11160618	C	T	C	Sox2_MA0143.3	0	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr14	101046636	101046637	chr14:101046637:A:G	rs10140057	A	G	G	Sox2_MA0143.3	2	1	+	9.019595766176417	2.900948058900136	CCATTGTC
chr14	101076854	101076855	chr14:101076855:T:C	chr14:101076855:T:C	T	C	T	Sox2_MA0143.3	13	0	-	0	0	.
chr14	101095446	101095447	chr14:101095447:G:T	rs10142111	G	T	G	Sox2_MA0143.3	0	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr14	101116738	101116739	chr14:101116739:C:T	rs1556702	C	T	T	Sox2_MA0143.3	-17	0	+	0	0	.
chr14	101116758	101116759	chr14:101116759:T:C	rs1556701	T	C	T	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr14	101121291	101121292	chr14:101121292:C:T	rs72702946	C	T	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr14	101125582	101125583	chr14:101125583:G:A	rs72702956	G	A	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr14	101187142	101187143	chr14:101187143:A:G	rs17099978	A	G	G	Sox2_MA0143.3	26	0	+	0	0	.
chr14	101189482	101189483	chr14:101189483:G:A	rs72702992	G	A	G	Sox2_MA0143.3	0	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr14	101219051	101219052	chr14:101219052:C:T	rs4906076	C	T	T	Sox2_MA0143.3	11	0	+	0	0	.
chr14	101222110	101222111	chr14:101222111:C:T	rs57672161	C	T	T	Sox2_MA0143.3	20	0	+	0	0	.
chr14	101234552	101234553	chr14:101234553:T:C	rs7155934	T	C	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr14	101238939	101238940	chr14:101238940:C:T	rs72704953	C	T	C	Sox2_MA0143.3	25	0	-	0	0	.
chr14	101241311	101241312	chr14:101241312:T:G	rs58933977	T	G	T	Sox2_MA0143.3	13	0	-	0	0	.
chr14	101294280	101294281	chr14:101294281:A:G	rs2401013	A	G	A	Sox2_MA0143.3	12	0	-	0	0	.
chr14	101406948	101406949	chr14:101406949:C:G	rs7155059	C	G	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr14	101438952	101438953	chr14:101438953:G:A	rs7158860	G	A	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr14	101497048	101497049	chr14:101497049:A:G	rs1889364	A	G	G	Sox2_MA0143.3	7	1	+	3.5547341015215945	8.864090315184848	CCTTTGTA
chr14	101513807	101513808	chr14:101513808:T:C	rs8017914	T	C	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr14	101624685	101624686	chr14:101624686:A:G	rs75889769	A	G	A	Sox2_MA0143.3	-4	0	-	0	0	.
chr14	101628224	101628225	chr14:101628225:G:C	rs78822966	G	C	G	Sox2_MA0143.3	1	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr14	101713858	101713859	chr14:101713859:G:C	rs72715607	G	C	g	Sox2_MA0143.3	0	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr14	101739579	101739580	chr14:101739580:C:A	rs74379514	C	A	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr14	101877386	101877387	chr14:101877387:G:A	rs144335763	G	A	g	Sox2_MA0143.3	25	0	+	0	0	.
chr14	101881695	101881696	chr14:101881696:T:C	rs1677991	T	C	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr14	101924874	101924875	chr14:101924875:C:A	rs58553858	C	A	C	Sox2_MA0143.3	1	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr14	101945510	101945511	chr14:101945511:G:C	rs10873529	G	C	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr14	101945568	101945569	chr14:101945569:A:C	rs2474676	A	C	C	Sox2_MA0143.3	14	0	+	0	0	.
chr14	101951174	101951175	chr14:101951175:A:G	rs2448239	A	G	A	Sox2_MA0143.3	3	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr14	101965282	101965283	chr14:101965283:C:T	rs143851548	C	T	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr14	102048097	102048098	chr14:102048098:T:G	rs2273656	T	G	T	Sox2_MA0143.3	6	1	+	9.613475778572903	2.7047209992576837	CCATTGTT
chr14	102086509	102086510	chr14:102086510:A:G	rs1046147673	A	G	A	Sox2_MA0143.3	16	0	-	0	0	.
chr14	102086518	102086519	chr14:102086519:G:A	rs36112665	G	A	G	Sox2_MA0143.3	7	1	-	9.206767037375712	9.800647049772198	CCTTTGTC
chr14	102086524	102086525	chr14:102086525:G:A	rs569008168	G	A	G	Sox2_MA0143.3	1	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr14	102116779	102116780	chr14:102116780:G:A	rs745313	G	A	G	Sox2_MA0143.3	0	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr14	102125533	102125534	chr14:102125534:T:C	rs75289074	T	C	T	Sox2_MA0143.3	-11	0	-	0	0	.
chr14	102180787	102180788	chr14:102180788:G:A	rs6575897	G	A	A	Sox2_MA0143.3	8	0	+	0	0	.
chr14	102207240	102207241	chr14:102207241:C:A	rs66808900	C	A	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr14	102278726	102278727	chr14:102278727:G:C	rs78824306	G	C	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr14	102279169	102279170	chr14:102279170:G:A	rs36045249	G	A	G	Sox2_MA0143.3	11	0	-	0	0	.
chr14	102279188	102279189	chr14:102279189:T:C	rs61992537	T	C	T	Sox2_MA0143.3	-8	0	-	0	0	.
chr14	102344646	102344647	chr14:102344647:T:C	rs1028212930	T	C	C	Sox2_MA0143.3	21	0	+	0	0	.
chr14	102438133	102438134	chr14:102438134:C:T	rs373163345	C	T	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr14	102438749	102438750	chr14:102438750:G:C	rs1190547	G	C	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr14	102438772	102438773	chr14:102438773:G:C	rs11624563	G	C	G	Sox2_MA0143.3	17	0	+	0	0	.
chr14	102466109	102466110	chr14:102466110:T:C	rs4906205	T	C	C	Sox2_MA0143.3	3	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr14	102479391	102479392	chr14:102479392:C:T	rs80191831	C	T	C	Sox2_MA0143.3	7	1	-	8.864090315184848	3.5547341015215945	CCTTTGTG
chr14	102499413	102499414	chr14:102499414:G:A	rs963528651	G	A	G	Sox2_MA0143.3	-2	0	+	0	0	.
chr14	102540181	102540182	chr14:102540182:C:T	rs12434755	C	T	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr14	102540205	102540206	chr14:102540206:T:C	rs35443066	T	C	T	Sox2_MA0143.3	9	0	+	0	0	.
chr14	102594127	102594128	chr14:102594128:G:A	rs3825565	G	A	.	Sox2_MA0143.3	12	0	-	0	0	.
chr14	102693608	102693609	chr14:102693609:G:A	rs79325152	G	A	a	Sox2_MA0143.3	11	0	-	0	0	.
chr14	102741634	102741635	chr14:102741635:A:G	rs114035531	A	G	a	Sox2_MA0143.3	12	0	+	0	0	.
chr14	102868904	102868905	chr14:102868905:T:C	rs28372031	T	C	C	Sox2_MA0143.3	11	0	+	0	0	.
chr14	102872746	102872747	chr14:102872747:A:G	rs147565097	A	G	A	Sox2_MA0143.3	4	1	-	8.676919043985553	1.7681642646703322	CCATTGTG
chr14	102895679	102895680	chr14:102895680:A:C	rs4906269	A	C	A	Sox2_MA0143.3	10	0	+	0	0	.
chr14	102901370	102901371	chr14:102901371:C:T	rs3783386	C	T	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr14	102949079	102949080	chr14:102949080:G:A	rs75830236	G	A	G	Sox2_MA0143.3	26	0	-	0	0	.
chr14	102987050	102987051	chr14:102987051:A:T	rs185904805	A	T	A	Sox2_MA0143.3	-10	0	-	0	0	.
chr14	102987055	102987056	chr14:102987056:T:C	rs34644161	T	C	T	Sox2_MA0143.3	-15	0	-	0	0	.
chr14	103018487	103018488	chr14:103018488:T:C	rs751837	T	C	C	Sox2_MA0143.3	-12	0	-	0	0	.
chr14	103074758	103074759	chr14:103074759:G:C	rs7149952	G	C	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr14	103138837	103138838	chr14:103138838:G:A	rs8176378	G	A	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr14	103144478	103144479	chr14:103144479:T:C	rs8007179	T	C	C	Sox2_MA0143.3	6	1	+	9.206767037375712	2.298012258060492	CCTTTGTC
chr14	103158890	103158891	chr14:103158891:C:T	rs56007379	C	T	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr14	103165890	103165891	chr14:103165891:C:T	rs11160720	C	T	C	Sox2_MA0143.3	21	0	-	0	0	.
chr14	103222147	103222148	chr14:103222148:C:T	rs116907517	C	T	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr14	103256651	103256652	chr14:103256652:G:T	rs6575964	G	T	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr14	103267149	103267150	chr14:103267150:C:T	rs117249924	C	T	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr14	103268224	103268225	chr14:103268225:C:T	rs146731434	C	T	C	Sox2_MA0143.3	26	0	-	0	0	.
chr14	103361964	103361965	chr14:103361965:G:A	rs117681988	G	A	G	Sox2_MA0143.3	11	0	-	0	0	.
chr14	103384751	103384752	chr14:103384752:A:C	rs10146340	A	C	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr14	103417174	103417175	chr14:103417175:A:G	rs12892062	A	G	A	Sox2_MA0143.3	11	0	-	0	0	.
chr14	103486694	103486695	chr14:103486695:T:C	rs17617941	T	C	T	Sox2_MA0143.3	27	0	+	0	0	.
chr14	103561932	103561933	chr14:103561933:T:C	rs7148456	T	C	T	Sox2_MA0143.3	2	1	-	8.676919043985553	2.5582713367092715	CCATTGTG
chr14	103562355	103562356	chr14:103562356:G:A	rs899888106	G	A	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr14	103569181	103569182	chr14:103569182:A:G	rs35772097	A	G	A	Sox2_MA0143.3	27	0	-	0	0	.
chr14	103606203	103606204	chr14:103606204:A:G	rs4383078	A	G	a	Sox2_MA0143.3	14	0	-	0	0	.
chr14	103679193	103679194	chr14:103679194:G:A	rs8003289	G	A	A	Sox2_MA0143.3	-7	0	+	0	0	.
chr14	103739473	103739474	chr14:103739474:C:A	rs730114	C	A	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr14	103739516	103739517	chr14:103739517:G:A	rs140139798	G	A	A	Sox2_MA0143.3	25	0	+	0	0	.
chr14	103836457	103836458	chr14:103836458:C:T	rs79556714	C	T	C	Sox2_MA0143.3	7	1	-	8.864090315184848	3.5547341015215945	CCTTTGTG
chr14	103855688	103855689	chr14:103855689:A:G	rs3861678	A	G	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr14	103910301	103910302	chr14:103910302:G:A	chr14:103910302:G:A	G	A	G	Sox2_MA0143.3	24	0	+	0	0	.
chr14	104012402	104012403	chr14:104012403:C:T	rs11160778	C	T	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr14	104088783	104088784	chr14:104088784:G:A	rs78757355	G	A	G	Sox2_MA0143.3	-2	0	+	0	0	.
chr14	104118657	104118658	chr14:104118658:T:C	rs1771007	T	C	T	Sox2_MA0143.3	6	1	+	8.676919043985553	1.7681642646703326	CCATTGTG
chr14	104196195	104196196	chr14:104196196:G:A	rs7148194	G	A	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr14	104252360	104252361	chr14:104252361:G:A	rs4073859	G	A	G	Sox2_MA0143.3	11	0	+	0	0	.
chr14	104284796	104284797	chr14:104284797:G:A	rs72704060	G	A	G	Sox2_MA0143.3	10	0	+	0	0	.
chr14	104284805	104284806	chr14:104284806:A:G	rs4993272	A	G	G	Sox2_MA0143.3	19	0	+	0	0	.
chr14	104292720	104292721	chr14:104292721:A:G	rs73366127	A	G	G	Sox2_MA0143.3	18	0	+	0	0	.
chr14	104343790	104343791	chr14:104343791:G:A	rs192882616	G	A	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr14	104364282	104364283	chr14:104364283:C:T	rs4622449	C	T	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr14	104384296	104384297	chr14:104384297:G:A	rs141004187	G	A	G	Sox2_MA0143.3	11	0	+	0	0	.
chr14	104388227	104388228	chr14:104388228:C:G	rs116646817	C	G	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr14	104390029	104390030	chr14:104390030:A:T	rs114931905	A	T	A	Sox2_MA0143.3	-13	0	+	0	0	.
chr14	104390037	104390038	chr14:104390038:T:C	rs925422058	T	C	T	Sox2_MA0143.3	-5	0	+	0	0	.
chr14	104396454	104396455	chr14:104396455:G:A	rs115292978	G	A	G	Sox2_MA0143.3	-5	0	+	0	0	.
chr14	104462328	104462329	chr14:104462329:A:G	rs141901927	A	G	A	Sox2_MA0143.3	9	0	+	0	0	.
chr14	104463616	104463617	chr14:104463617:C:A	rs28797843	C	A	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr14	104528669	104528670	chr14:104528670:T:C	rs10147802	T	C	N	Sox2_MA0143.3	-16	0	+	0	0	.
chr14	104547588	104547589	chr14:104547589:T:C	rs67776435	T	C	N	Sox2_MA0143.3	26	0	-	0	0	.
chr14	104547592	104547593	chr14:104547593:A:G	rs66488742	A	G	N	Sox2_MA0143.3	22	0	-	0	0	.
chr14	104547598	104547599	chr14:104547599:T:C	rs139611563	T	C	t	Sox2_MA0143.3	16	0	-	0	0	.
chr14	104547628	104547629	chr14:104547629:A:C	rs68185009	A	C	a	Sox2_MA0143.3	-14	0	-	0	0	.
chr14	104549576	104549577	chr14:104549577:A:G	rs28538818	A	G	N	Sox2_MA0143.3	4	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr14	104644213	104644214	chr14:104644214:T:C	rs10147051	T	C	T	Sox2_MA0143.3	-16	0	-	0	0	.
chr14	104650492	104650493	chr14:104650493:C:T	rs112695218	C	T	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr14	104684512	104684513	chr14:104684513:A:G	rs79132383	A	G	A	Sox2_MA0143.3	-16	0	-	0	0	.
chr14	104695716	104695717	chr14:104695717:T:C	rs4326984	T	C	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr14	104716553	104716554	chr14:104716554:G:A	rs80022508	G	A	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr14	104726347	104726348	chr14:104726348:G:A	rs72715972	G	A	G	Sox2_MA0143.3	5	1	+	9.206767037375712	2.298012258060492	CCTTTGTC
chr14	104732272	104732273	chr14:104732273:C:A	rs141594802	C	A	C	Sox2_MA0143.3	25	0	+	0	0	.
chr14	104818813	104818814	chr14:104818814:C:T	rs147377707	C	T	C	Sox2_MA0143.3	21	0	+	0	0	.
chr14	104820305	104820306	chr14:104820306:G:A	rs117725127	G	A	G	Sox2_MA0143.3	11	0	-	0	0	.
chr14	104836412	104836413	chr14:104836413:T:C	rs112768215	T	C	t	Sox2_MA0143.3	-19	0	-	0	0	.
chr14	104857446	104857447	chr14:104857447:T:C	rs775375838	T	C	T	Sox2_MA0143.3	3	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr14	104916359	104916360	chr14:104916360:A:T	rs2083540	A	T	A	Sox2_MA0143.3	23	0	+	0	0	.
chr14	104970566	104970567	chr14:104970567:G:A	rs56190325	G	A	G	Sox2_MA0143.3	10	0	+	0	0	.
chr14	104989539	104989540	chr14:104989540:C:G	rs2241866	C	G	C	Sox2_MA0143.3	19	0	+	0	0	.
chr14	104995354	104995355	chr14:104995355:C:T	rs80326298	C	T	C	Sox2_MA0143.3	13	0	+	0	0	.
chr14	105021133	105021134	chr14:105021134:G:T	rs910085866	G	T	G	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr14	105023227	105023228	chr14:105023228:C:T	rs28675197	C	T	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr14	105033814	105033815	chr14:105033815:G:A	rs4359377	G	A	G	Sox2_MA0143.3	0	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr14	105033826	105033827	chr14:105033827:C:G	rs141054753	C	G	C	Sox2_MA0143.3	-12	0	-	0	0	.
chr14	105087193	105087194	chr14:105087194:G:A	rs184908497	G	A	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr14	105087212	105087213	chr14:105087213:T:C	rs1018890390	T	C	T	Sox2_MA0143.3	2	1	+	9.800647049772198	3.494828071296623	CCTTTGTT
chr14	105091586	105091587	chr14:105091587:G:A	rs145724691	G	A	G	Sox2_MA0143.3	0	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr14	105093442	105093443	chr14:105093443:G:A	rs991514979	G	A	-	Sox2_MA0143.3	-13	0	+	0	0	.
chr14	105097181	105097182	chr14:105097182:T:C	rs7155121	T	C	T	Sox2_MA0143.3	17	0	+	0	0	.
chr14	105149310	105149311	chr14:105149311:C:T	rs9972231	C	T	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr14	105163246	105163247	chr14:105163247:C:G	rs11160836	C	G	N	Sox2_MA0143.3	16	0	+	0	0	.
chr14	105183399	105183400	chr14:105183400:G:A	rs1003635	G	A	A	Sox2_MA0143.3	-3	0	-	0	0	.
chr14	105214076	105214077	chr14:105214077:G:A	rs7147888	G	A	G	Sox2_MA0143.3	27	0	+	0	0	.
chr14	105219527	105219528	chr14:105219528:T:C	rs8020454	T	C	C	Sox2_MA0143.3	10	0	-	0	0	.
chr14	105288057	105288058	chr14:105288058:C:T	rs150050193	C	T	C	Sox2_MA0143.3	-12	0	-	0	0	.
chr14	105370875	105370876	chr14:105370876:C:T	rs8008801	C	T	T	Sox2_MA0143.3	18	0	+	0	0	.
chr14	105390009	105390010	chr14:105390010:A:G	chr14:105390010:A:G	A	G	A	Sox2_MA0143.3	17	0	+	0	0	.
chr14	105400300	105400301	chr14:105400301:C:T	rs74541291	C	T	C	Sox2_MA0143.3	12	0	+	0	0	.
chr14	105476322	105476323	chr14:105476323:C:T	rs78427968	C	T	C	Sox2_MA0143.3	-12	0	-	0	0	.
chr14	105481358	105481359	chr14:105481359:C:T	rs587620989	C	T	C	Sox2_MA0143.3	9	0	+	0	0	.
chr14	105498611	105498612	chr14:105498612:C:T	rs587623462	C	T	.	Sox2_MA0143.3	13	0	+	0	0	.
chr14	105624940	105624941	chr14:105624941:T:C	chr14:105624941:T:C	T	C	.	Sox2_MA0143.3	4	1	+	9.800647049772198	2.8918922704569785	CCTTTGTT
chr14	105669322	105669323	chr14:105669323:G:C	rs112613784	G	C	.	Sox2_MA0143.3	12	0	+	0	0	.
chr14	105731344	105731345	chr14:105731345:G:T	rs72713382	G	T	.	Sox2_MA0143.3	-14	0	+	0	0	.
chr14	105733976	105733977	chr14:105733977:A:G	rs112184033	A	G	.	Sox2_MA0143.3	8	0	-	0	0	.
chr14	105733993	105733994	chr14:105733994:C:T	rs1348350549	C	T	.	Sox2_MA0143.3	-9	0	-	0	0	.
chr14	105793419	105793420	chr14:105793420:C:A	rs79574199	C	A	.	Sox2_MA0143.3	12	0	-	0	0	.
chr14	105803394	105803395	chr14:105803395:G:C	rs12434980	G	C	.	Sox2_MA0143.3	-10	0	-	0	0	.
chr14	105863194	105863195	chr14:105863195:T:A	rs372554181	T	A	.	Sox2_MA0143.3	-19	0	-	0	0	.
chr14	105863272	105863273	chr14:105863273:A:C	chr14:105863273:A:C	A	C	.	Sox2_MA0143.3	-5	0	-	0	0	.
chr14	105863279	105863280	chr14:105863280:T:G	rs377097987	T	G	.	Sox2_MA0143.3	-12	0	-	0	0	.
chr14	105884337	105884338	chr14:105884338:G:T	rs112659340	G	T	.	Sox2_MA0143.3	20	0	-	0	0	.
chr14	105889417	105889418	chr14:105889418:G:A	rs3829420	G	A	.	Sox2_MA0143.3	22	0	+	0	0	.
chr14	105942985	105942986	chr14:105942986:A:G	rs12587941	A	G	.	Sox2_MA0143.3	-12	0	+	0	0	.
chr14	106005238	106005239	chr14:106005239:A:C	rs34874585	A	C	.	Sox2_MA0143.3	-20	0	+	0	0	.
chr14	106115911	106115912	chr14:106115912:G:A	rs2077170	G	A	.	Sox2_MA0143.3	8	0	-	0	0	.
chr14	106141478	106141479	chr14:106141479:T:C	rs10438255	T	C	.	Sox2_MA0143.3	15	0	+	0	0	.
chr14	106209708	106209709	chr14:106209709:C:G	rs72695968	C	G	.	Sox2_MA0143.3	-20	0	+	0	0	.
chr14	106226584	106226585	chr14:106226585:T:C	rs57625585	T	C	.	Sox2_MA0143.3	6	1	+	8.676919043985553	1.7681642646703326	CCATTGTG
chr14	106226590	106226591	chr14:106226591:G:T	rs28687347	G	T	.	Sox2_MA0143.3	12	0	+	0	0	.
chr14	106579882	106579883	chr14:106579883:G:C	rs117293055	G	C	g	Sox2_MA0143.3	-18	0	+	0	0	.
chr14	106592659	106592660	chr14:106592660:G:A	rs8012872	G	A	a	Sox2_MA0143.3	0	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr14	106592661	106592662	chr14:106592662:C:T	rs2427705	C	T	t	Sox2_MA0143.3	-2	0	-	0	0	.
chr14	106600829	106600830	chr14:106600830:A:C	rs10149481	A	C	c	Sox2_MA0143.3	3	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr14	106674686	106674687	chr14:106674687:C:T	chr14:106674687:C:T	C	T	N	Sox2_MA0143.3	12	0	-	0	0	.
chr14	106674693	106674694	chr14:106674694:C:T	chr14:106674694:C:T	C	T	N	Sox2_MA0143.3	5	1	-	8.676919043985553	1.7681642646703324	CCATTGTG
chr14	106674998	106674999	chr14:106674999:G:A	rs2439626	G	A	-	Sox2_MA0143.3	0	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr14	106675000	106675001	chr14:106675001:C:T	rs199841570	C	T	-	Sox2_MA0143.3	-2	0	-	0	0	.
chr14	106712734	106712735	chr14:106712735:C:T	rs28534968	C	T	.	Sox2_MA0143.3	10	0	+	0	0	.
chr14	106834004	106834005	chr14:106834005:A:C	rs7157302	A	C	.	Sox2_MA0143.3	-11	0	+	0	0	.
chr15	17074033	17074034	chr15:17074034:A:G	rs1283426998	A	G	.	Sox2_MA0143.3	9	0	+	0	0	.
chr15	20023989	20023990	chr15:20023990:G:A	rs77564768	G	A	g	Sox2_MA0143.3	10	0	-	0	0	.
chr15	20263358	20263359	chr15:20263359:T:C	rs2123302	T	C	N	Sox2_MA0143.3	6	1	+	9.019595766176417	2.110840986861197	CCATTGTC
chr15	20272461	20272462	chr15:20272462:G:C	rs2044975	G	C	g	Sox2_MA0143.3	9	0	+	0	0	.
chr15	20283963	20283964	chr15:20283964:G:A	rs12438958	G	A	g	Sox2_MA0143.3	-16	0	+	0	0	.
chr15	20350981	20350982	chr15:20350982:G:A	rs904845	G	A	g	Sox2_MA0143.3	-13	0	-	0	0	.
chr15	20360572	20360573	chr15:20360573:T:C	rs6599966	T	C	t	Sox2_MA0143.3	-20	0	-	0	0	.
chr15	20587300	20587301	chr15:20587301:G:T	rs200108008	G	T	g	Sox2_MA0143.3	15	0	-	0	0	.
chr15	20593735	20593736	chr15:20593736:G:A	rs775801147	G	A	g	Sox2_MA0143.3	-1	0	+	0	0	.
chr15	20651315	20651316	chr15:20651316:T:G	rs71468610	T	G	.	Sox2_MA0143.3	2	1	+	9.800647049772198	3.494828071296623	CCTTTGTT
chr15	21015272	21015273	chr15:21015273:G:T	chr15:21015273:G:T	G	T	g	Sox2_MA0143.3	21	0	+	0	0	.
chr15	21019184	21019185	chr15:21019185:G:A	rs10152952	G	A	g	Sox2_MA0143.3	8	0	+	0	0	.
chr15	21259099	21259100	chr15:21259100:C:T	rs4984174	C	T	.	Sox2_MA0143.3	-7	0	-	0	0	.
chr15	21268451	21268452	chr15:21268452:G:C	rs4096280	G	C	C	Sox2_MA0143.3	0	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr15	22222028	22222029	chr15:22222029:G:A	rs112980531	G	A	g	Sox2_MA0143.3	-8	0	+	0	0	.
chr15	22227827	22227828	chr15:22227828:T:C	rs28610485	T	C	N	Sox2_MA0143.3	7	1	+	9.800647049772198	9.206767037375712	CCTTTGTT
chr15	22228710	22228711	chr15:22228711:G:C	rs74006615	G	C	N	Sox2_MA0143.3	-20	0	+	0	0	.
chr15	22228720	22228721	chr15:22228721:C:A	rs1307018294	C	A	c	Sox2_MA0143.3	-10	0	+	0	0	.
chr15	22241103	22241104	chr15:22241104:G:T	rs4779381	G	T	T	Sox2_MA0143.3	-15	0	-	0	0	.
chr15	22269435	22269436	chr15:22269436:G:C	rs540818669	G	C	G	Sox2_MA0143.3	19	0	+	0	0	.
chr15	22283179	22283180	chr15:22283180:T:C	rs57926734	T	C	T	Sox2_MA0143.3	6	1	+	9.613475778572903	2.7047209992576837	CCATTGTT
chr15	22815964	22815965	chr15:22815965:C:G	rs8027218	C	G	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr15	22919247	22919248	chr15:22919248:C:T	rs12443254	C	T	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr15	22925400	22925401	chr15:22925401:C:T	rs60506149	C	T	C	Sox2_MA0143.3	17	0	-	0	0	.
chr15	22956570	22956571	chr15:22956571:T:C	rs115753104	T	C	T	Sox2_MA0143.3	21	0	-	0	0	.
chr15	22996178	22996179	chr15:22996179:G:A	rs765763	G	A	G	Sox2_MA0143.3	15	0	+	0	0	.
chr15	23022555	23022556	chr15:23022556:A:G	rs77791421	A	G	a	Sox2_MA0143.3	-8	0	-	0	0	.
chr15	23072608	23072609	chr15:23072609:T:C	rs7494922	T	C	t	Sox2_MA0143.3	10	0	-	0	0	.
chr15	24055426	24055427	chr15:24055427:G:A	rs12907766	G	A	A	Sox2_MA0143.3	-7	0	-	0	0	.
chr15	24189145	24189146	chr15:24189146:G:A	rs62189481	G	A	-	Sox2_MA0143.3	-20	0	+	0	0	.
chr15	24248043	24248044	chr15:24248044:C:A	rs34254686	C	A	c	Sox2_MA0143.3	-1	0	-	0	0	.
chr15	24657974	24657975	chr15:24657975:C:G	rs35088883	C	G	C	Sox2_MA0143.3	0	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr15	24773153	24773154	chr15:24773154:G:T	rs151094509	G	T	G	Sox2_MA0143.3	10	0	+	0	0	.
chr15	24801828	24801829	chr15:24801829:C:T	rs12910496	C	T	T	Sox2_MA0143.3	-3	0	+	0	0	.
chr15	24801995	24801996	chr15:24801996:C:G	rs12910798	C	G	G	Sox2_MA0143.3	25	0	-	0	0	.
chr15	24859234	24859235	chr15:24859235:G:T	rs4906923	G	T	G	Sox2_MA0143.3	-14	0	+	0	0	.
chr15	25066212	25066213	chr15:25066213:A:T	rs11631691	A	T	A	Sox2_MA0143.3	-11	0	+	0	0	.
chr15	25066222	25066223	chr15:25066223:G:A	rs113885124	G	A	A	Sox2_MA0143.3	-1	0	+	0	0	.
chr15	25180133	25180134	chr15:25180134:A:G	rs2739842	A	G	G	Sox2_MA0143.3	23	0	+	0	0	.
chr15	25343309	25343310	chr15:25343310:A:G	rs73364198	A	G	A	Sox2_MA0143.3	6	1	-	9.613475778572903	2.7047209992576837	CCATTGTT
chr15	25432327	25432328	chr15:25432328:T:G	rs6576423	T	G	T	Sox2_MA0143.3	27	0	-	0	0	.
chr15	25532714	25532715	chr15:25532715:G:A	rs146441903	G	A	G	Sox2_MA0143.3	22	0	+	0	0	.
chr15	25543266	25543267	chr15:25543267:G:C	rs73371742	G	C	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr15	25612709	25612710	chr15:25612710:T:C	rs1976075	T	C	T	Sox2_MA0143.3	18	0	-	0	0	.
chr15	25643382	25643383	chr15:25643383:C:T	rs115649884	C	T	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr15	25644417	25644418	chr15:25644418:G:C	rs7173479	G	C	C	Sox2_MA0143.3	20	0	-	0	0	.
chr15	25649510	25649511	chr15:25649511:C:T	rs6576443	C	T	T	Sox2_MA0143.3	8	0	+	0	0	.
chr15	25685425	25685426	chr15:25685426:G:A	rs8025743	G	A	A	Sox2_MA0143.3	18	0	+	0	0	.
chr15	25759134	25759135	chr15:25759135:G:A	rs55814476	G	A	G	Sox2_MA0143.3	18	0	+	0	0	.
chr15	25764772	25764773	chr15:25764773:C:T	rs12437962	C	T	C	Sox2_MA0143.3	5	1	-	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr15	25794824	25794825	chr15:25794825:G:A	rs12591364	G	A	G	Sox2_MA0143.3	15	0	-	0	0	.
chr15	25806967	25806968	chr15:25806968:G:C	rs12437514	G	C	C	Sox2_MA0143.3	5	1	+	8.676919043985553	1.7681642646703324	CCATTGTG
chr15	25839049	25839050	chr15:25839050:G:A	rs2044314	G	A	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr15	25846834	25846835	chr15:25846835:T:C	rs144523525	T	C	T	Sox2_MA0143.3	23	0	+	0	0	.
chr15	25849147	25849148	chr15:25849148:G:A	rs60801086	G	A	G	Sox2_MA0143.3	9	0	-	0	0	.
chr15	25906918	25906919	chr15:25906919:T:C	rs8028085	T	C	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr15	25947411	25947412	chr15:25947412:C:T	rs55893708	C	T	T	Sox2_MA0143.3	-17	0	-	0	0	.
chr15	25958338	25958339	chr15:25958339:C:T	rs2036890	C	T	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr15	26003847	26003848	chr15:26003848:T:C	rs12903700	T	C	C	Sox2_MA0143.3	20	0	+	0	0	.
chr15	26007745	26007746	chr15:26007746:T:C	rs56031062	T	C	T	Sox2_MA0143.3	2	1	+	9.800647049772198	3.494828071296623	CCTTTGTT
chr15	26023592	26023593	chr15:26023593:C:T	rs56379107	C	T	C	Sox2_MA0143.3	-12	0	-	0	0	.
chr15	26051231	26051232	chr15:26051232:C:T	rs117316849	C	T	C	Sox2_MA0143.3	26	0	-	0	0	.
chr15	26051248	26051249	chr15:26051249:G:A	rs3915026	G	A	G	Sox2_MA0143.3	9	0	-	0	0	.
chr15	26051256	26051257	chr15:26051257:G:T	rs545966771	G	T	G	Sox2_MA0143.3	1	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr15	26128994	26128995	chr15:26128995:C:G	rs504441	C	G	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr15	26156305	26156306	chr15:26156306:T:C	rs11853169	T	C	C	Sox2_MA0143.3	21	0	-	0	0	.
chr15	26206072	26206073	chr15:26206073:C:G	rs78798252	C	G	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr15	26767520	26767521	chr15:26767521:C:T	rs12437535	C	T	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr15	26775725	26775726	chr15:26775726:G:A	rs8038663	G	A	A	Sox2_MA0143.3	26	0	-	0	0	.
chr15	26775732	26775733	chr15:26775733:A:T	rs11858484	A	T	A	Sox2_MA0143.3	19	0	-	0	0	.
chr15	26996529	26996530	chr15:26996530:T:G	rs140026783	T	G	T	Sox2_MA0143.3	-14	0	+	0	0	.
chr15	27064474	27064475	chr15:27064475:A:G	rs878920	A	G	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr15	27086324	27086325	chr15:27086325:C:T	rs11634228	C	T	c	Sox2_MA0143.3	13	0	-	0	0	.
chr15	27137374	27137375	chr15:27137375:A:G	rs208173	A	G	A	Sox2_MA0143.3	-12	0	-	0	0	.
chr15	27137381	27137382	chr15:27137382:C:T	rs208172	C	T	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr15	27239246	27239247	chr15:27239247:C:T	rs34753675	C	T	T	Sox2_MA0143.3	-9	0	+	0	0	.
chr15	27288918	27288919	chr15:27288919:C:T	rs896806815	C	T	C	Sox2_MA0143.3	13	0	+	0	0	.
chr15	27412665	27412666	chr15:27412666:C:A	rs62003767	C	A	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr15	27492052	27492053	chr15:27492053:T:C	rs8042002	T	C	T	Sox2_MA0143.3	11	0	+	0	0	.
chr15	27592793	27592794	chr15:27592794:G:T	rs2035184	G	T	G	Sox2_MA0143.3	19	0	-	0	0	.
chr15	27694807	27694808	chr15:27694808:C:T	rs150175516	C	T	C	Sox2_MA0143.3	15	0	+	0	0	.
chr15	27879070	27879071	chr15:27879071:C:T	rs56677348	C	T	T	Sox2_MA0143.3	13	0	+	0	0	.
chr15	27899877	27899878	chr15:27899878:T:C	rs2871886	T	C	T	Sox2_MA0143.3	-8	0	-	0	0	.
chr15	27935053	27935054	chr15:27935054:G:A	rs2703954	G	A	G	Sox2_MA0143.3	14	0	-	0	0	.
chr15	27993372	27993373	chr15:27993373:A:G	rs12595216	A	G	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr15	28023843	28023844	chr15:28023844:C:A	rs749846	C	A	C	Sox2_MA0143.3	21	0	-	0	0	.
chr15	28023861	28023862	chr15:28023862:A:C	rs3794606	A	C	C	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr15	28058381	28058382	chr15:28058382:A:C	rs72712681	A	C	C	Sox2_MA0143.3	10	0	+	0	0	.
chr15	28123711	28123712	chr15:28123712:G:A	rs6497273	G	A	G	Sox2_MA0143.3	25	0	-	0	0	.
chr15	28832869	28832870	chr15:28832870:G:C	rs12439862	G	C	.	Sox2_MA0143.3	0	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr15	28849404	28849405	chr15:28849405:T:C	rs8031002	T	C	.	Sox2_MA0143.3	-10	0	+	0	0	.
chr15	28863650	28863651	chr15:28863651:C:T	rs149041627	C	T	.	Sox2_MA0143.3	9	0	-	0	0	.
chr15	28900591	28900592	chr15:28900592:G:A	rs139099950	G	A	A	Sox2_MA0143.3	-19	0	+	0	0	.
chr15	28902824	28902825	chr15:28902825:T:G	rs4073318	T	G	T	Sox2_MA0143.3	-16	0	+	0	0	.
chr15	28902840	28902841	chr15:28902841:C:G	rs144583617	C	G	G	Sox2_MA0143.3	0	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr15	28922498	28922499	chr15:28922499:C:G	rs55817275	C	G	A	Sox2_MA0143.3	1	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr15	28922506	28922507	chr15:28922507:C:T	rs12915865	C	T	c	Sox2_MA0143.3	9	0	+	0	0	.
chr15	28922507	28922508	chr15:28922508:G:A	rs7179002	G	A	G	Sox2_MA0143.3	10	0	+	0	0	.
chr15	28994735	28994736	chr15:28994736:G:A	rs4995091	G	A	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr15	29047663	29047664	chr15:29047664:T:G	rs964568491	T	G	T	Sox2_MA0143.3	11	0	+	0	0	.
chr15	29088505	29088506	chr15:29088506:G:A	rs74692388	G	A	G	Sox2_MA0143.3	12	0	+	0	0	.
chr15	29108175	29108176	chr15:29108176:C:T	rs2279483	C	T	C	Sox2_MA0143.3	19	0	+	0	0	.
chr15	29183183	29183184	chr15:29183184:C:A	rs530335757	C	A	C	Sox2_MA0143.3	24	0	-	0	0	.
chr15	29383089	29383090	chr15:29383090:C:T	rs8031615	C	T	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr15	29386713	29386714	chr15:29386714:A:G	rs8041543	A	G	G	Sox2_MA0143.3	4	1	-	8.676919043985553	1.7681642646703322	CCATTGTG
chr15	29445663	29445664	chr15:29445664:T:C	rs540178658	T	C	t	Sox2_MA0143.3	3	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr15	29458921	29458922	chr15:29458922:T:C	rs568956	T	C	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr15	29524659	29524660	chr15:29524660:G:A	rs66635026	G	A	A	Sox2_MA0143.3	-16	0	-	0	0	.
chr15	29567166	29567167	chr15:29567167:T:A	rs77241922	T	A	T	Sox2_MA0143.3	22	0	-	0	0	.
chr15	29612131	29612132	chr15:29612132:G:A	rs115002414	G	A	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr15	29711879	29711880	chr15:29711880:A:G	rs12902476	A	G	A	Sox2_MA0143.3	-16	0	-	0	0	.
chr15	29917623	29917624	chr15:29917624:C:G	rs76215974	C	G	C	Sox2_MA0143.3	8	0	-	0	0	.
chr15	29942370	29942371	chr15:29942371:C:T	rs144831159	C	T	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr15	30194548	30194549	chr15:30194549:C:G	rs905264	C	G	.	Sox2_MA0143.3	-1	0	-	0	0	.
chr15	30196203	30196204	chr15:30196204:G:T	rs536130172	G	T	.	Sox2_MA0143.3	-16	0	-	0	0	.
chr15	30889249	30889250	chr15:30889250:T:C	rs148020636	T	C	T	Sox2_MA0143.3	-6	0	-	0	0	.
chr15	30959444	30959445	chr15:30959445:G:C	rs2959054	G	C	G	Sox2_MA0143.3	23	0	+	0	0	.
chr15	31060779	31060780	chr15:31060780:C:T	rs12902840	C	T	C	Sox2_MA0143.3	16	0	-	0	0	.
chr15	31081523	31081524	chr15:31081524:T:C	rs4779504	T	C	T	Sox2_MA0143.3	3	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr15	31088808	31088809	chr15:31088809:A:G	rs34633661	A	G	A	Sox2_MA0143.3	-15	0	+	0	0	.
chr15	31101878	31101879	chr15:31101879:C:T	rs11070811	C	T	C	Sox2_MA0143.3	25	0	-	0	0	.
chr15	31157791	31157792	chr15:31157792:C:A	rs11631001	C	A	.	Sox2_MA0143.3	12	0	-	0	0	.
chr15	31199996	31199997	chr15:31199997:C:G	rs74013323	C	G	C	Sox2_MA0143.3	25	0	+	0	0	.
chr15	31215852	31215853	chr15:31215853:G:A	rs62037863	G	A	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr15	31216967	31216968	chr15:31216968:G:A	rs28631253	G	A	G	Sox2_MA0143.3	1	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr15	31242092	31242093	chr15:31242093:G:T	rs2061210	G	T	G	Sox2_MA0143.3	17	0	-	0	0	.
chr15	31242116	31242117	chr15:31242117:G:C	rs117989497	G	C	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr15	31249871	31249872	chr15:31249872:C:T	rs75576656	C	T	C	Sox2_MA0143.3	19	0	-	0	0	.
chr15	31257419	31257420	chr15:31257420:T:G	rs76028451	T	G	T	Sox2_MA0143.3	4	1	+	3.5547341015215945	-3.3540206777936254	CCTTTGTA
chr15	31310416	31310417	chr15:31310417:C:A	rs12595077	C	A	c	Sox2_MA0143.3	-5	0	+	0	0	.
chr15	31358121	31358122	chr15:31358122:G:C	rs78178305	G	C	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr15	31360993	31360994	chr15:31360994:G:A	rs576029448	G	A	G	Sox2_MA0143.3	24	0	+	0	0	.
chr15	31369799	31369800	chr15:31369800:A:G	rs751135868	A	G	A	Sox2_MA0143.3	-10	0	+	0	0	.
chr15	31394988	31394989	chr15:31394989:G:C	rs115076268	G	C	g	Sox2_MA0143.3	15	0	+	0	0	.
chr15	31435179	31435180	chr15:31435180:C:T	rs911465037	C	T	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr15	31435191	31435192	chr15:31435192:G:A	rs116398014	G	A	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr15	31459182	31459183	chr15:31459183:G:A	rs34560370	G	A	G	Sox2_MA0143.3	15	0	+	0	0	.
chr15	31463923	31463924	chr15:31463924:C:T	rs67699697	C	T	C	Sox2_MA0143.3	10	0	-	0	0	.
chr15	31478118	31478119	chr15:31478119:A:T	rs77903189	A	T	a	Sox2_MA0143.3	-20	0	+	0	0	.
chr15	31480541	31480542	chr15:31480542:G:A	rs111997554	G	A	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr15	31500236	31500237	chr15:31500237:C:T	rs80233534	C	T	C	Sox2_MA0143.3	24	0	-	0	0	.
chr15	31500266	31500267	chr15:31500267:C:A	chr15:31500267:C:A	C	A	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr15	31515381	31515382	chr15:31515382:G:A	rs1459200	G	A	A	Sox2_MA0143.3	-5	0	+	0	0	.
chr15	31515409	31515410	chr15:31515410:C:T	rs1459201	C	T	T	Sox2_MA0143.3	23	0	+	0	0	.
chr15	31516910	31516911	chr15:31516911:T:C	rs114517545	T	C	T	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr15	31540258	31540259	chr15:31540259:C:G	rs34786324	C	G	C	Sox2_MA0143.3	23	0	-	0	0	.
chr15	31825831	31825832	chr15:31825832:G:A	rs4779926	G	A	G	Sox2_MA0143.3	1	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr15	31846514	31846515	chr15:31846515:A:G	rs7165744	A	G	A	Sox2_MA0143.3	-14	0	-	0	0	.
chr15	32033472	32033473	chr15:32033473:A:G	rs883473	A	G	A	Sox2_MA0143.3	12	0	+	0	0	.
chr15	32033689	32033690	chr15:32033690:C:T	rs193217670	C	T	C	Sox2_MA0143.3	27	0	-	0	0	.
chr15	32148521	32148522	chr15:32148522:A:G	rs192509886	A	G	A	Sox2_MA0143.3	-17	0	+	0	0	.
chr15	32670412	32670413	chr15:32670413:A:G	rs76567818	A	G	A	Sox2_MA0143.3	-18	0	+	0	0	.
chr15	32670440	32670441	chr15:32670441:T:C	rs8041254	T	C	T	Sox2_MA0143.3	10	0	+	0	0	.
chr15	32699511	32699512	chr15:32699512:C:G	rs16969344	C	G	C	Sox2_MA0143.3	17	0	-	0	0	.
chr15	32700909	32700910	chr15:32700910:C:T	rs16969681	C	T	C	Sox2_MA0143.3	15	0	-	0	0	.
chr15	32715599	32715600	chr15:32715600:C:A	rs1534597	C	A	A	Sox2_MA0143.3	17	0	-	0	0	.
chr15	32774125	32774126	chr15:32774126:G:A	rs16958710	G	A	G	Sox2_MA0143.3	13	0	+	0	0	.
chr15	32795192	32795193	chr15:32795193:C:G	rs28625085	C	G	C	Sox2_MA0143.3	10	0	-	0	0	.
chr15	32866830	32866831	chr15:32866831:T:C	rs28600268	T	C	T	Sox2_MA0143.3	3	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr15	32920562	32920563	chr15:32920563:T:C	rs11635965	T	C	T	Sox2_MA0143.3	17	0	-	0	0	.
chr15	32929161	32929162	chr15:32929162:G:C	rs11633554	G	C	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr15	33083667	33083668	chr15:33083668:C:G	rs8031590	C	G	C	Sox2_MA0143.3	23	0	+	0	0	.
chr15	33103577	33103578	chr15:33103578:G:C	rs345783	G	C	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr15	33110949	33110950	chr15:33110950:C:T	rs345765	C	T	T	Sox2_MA0143.3	8	0	+	0	0	.
chr15	33115270	33115271	chr15:33115271:G:A	rs11072234	G	A	G	Sox2_MA0143.3	9	0	-	0	0	.
chr15	33131770	33131771	chr15:33131771:A:G	rs190265207	A	G	A	Sox2_MA0143.3	-8	0	-	0	0	.
chr15	33136178	33136179	chr15:33136179:G:C	rs145932720	G	C	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr15	33144113	33144114	chr15:33144114:T:C	rs2444976	T	C	T	Sox2_MA0143.3	15	0	+	0	0	.
chr15	33150330	33150331	chr15:33150331:C:T	rs117605322	C	T	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr15	33158616	33158617	chr15:33158617:G:A	rs374864775	G	A	G	Sox2_MA0143.3	11	0	+	0	0	.
chr15	33242492	33242493	chr15:33242493:C:T	rs16967369	C	T	T	Sox2_MA0143.3	-10	0	-	0	0	.
chr15	33347766	33347767	chr15:33347767:C:A	rs7183038	C	A	a	Sox2_MA0143.3	25	0	+	0	0	.
chr15	33384072	33384073	chr15:33384073:G:A	rs2339269	G	A	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr15	33509744	33509745	chr15:33509745:T:C	rs7165389	T	C	C	Sox2_MA0143.3	8	0	+	0	0	.
chr15	33548301	33548302	chr15:33548302:A:G	rs79617702	A	G	A	Sox2_MA0143.3	-12	0	+	0	0	.
chr15	33679674	33679675	chr15:33679675:C:T	rs28408314	C	T	C	Sox2_MA0143.3	5	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr15	33965229	33965230	chr15:33965230:C:A	rs9972474	C	A	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr15	33990729	33990730	chr15:33990730:C:T	rs16958529	C	T	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr15	34019683	34019684	chr15:34019684:A:T	rs2632110	A	T	T	Sox2_MA0143.3	8	0	+	0	0	.
chr15	34066123	34066124	chr15:34066124:T:C	rs541098	T	C	T	Sox2_MA0143.3	-13	0	+	0	0	.
chr15	34123045	34123046	chr15:34123046:G:A	rs192404071	G	A	G	Sox2_MA0143.3	24	0	+	0	0	.
chr15	34214567	34214568	chr15:34214568:A:G	rs8036323	A	G	G	Sox2_MA0143.3	10	0	-	0	0	.
chr15	34367347	34367348	chr15:34367348:G:T	rs2270612	G	T	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr15	34690376	34690377	chr15:34690377:A:G	rs8031068	A	G	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr15	34753305	34753306	chr15:34753306:G:A	rs36084466	G	A	G	Sox2_MA0143.3	22	0	-	0	0	.
chr15	34814099	34814100	chr15:34814100:T:C	rs79302467	T	C	T	Sox2_MA0143.3	-10	0	-	0	0	.
chr15	34987198	34987199	chr15:34987199:C:G	rs116667957	C	G	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr15	34987777	34987778	chr15:34987778:C:G	rs184911639	C	G	C	Sox2_MA0143.3	27	0	-	0	0	.
chr15	35020624	35020625	chr15:35020625:T:C	rs4924470	T	C	C	Sox2_MA0143.3	21	0	-	0	0	.
chr15	35158077	35158078	chr15:35158078:T:G	rs11073086	T	G	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr15	35166335	35166336	chr15:35166336:G:C	rs4924584	G	C	C	Sox2_MA0143.3	27	0	-	0	0	.
chr15	35293602	35293603	chr15:35293603:T:C	rs764942959	T	C	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr15	35613977	35613978	chr15:35613978:C:T	rs11073105	C	T	T	Sox2_MA0143.3	1	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr15	35706126	35706127	chr15:35706127:A:G	rs1498583	A	G	A	Sox2_MA0143.3	-14	0	-	0	0	.
chr15	35830855	35830856	chr15:35830856:C:T	rs2646775	C	T	T	Sox2_MA0143.3	-5	0	+	0	0	.
chr15	35852947	35852948	chr15:35852948:T:C	rs147735639	T	C	T	Sox2_MA0143.3	14	0	-	0	0	.
chr15	35852957	35852958	chr15:35852958:A:G	rs2683102	A	G	A	Sox2_MA0143.3	4	1	-	3.5547341015215945	-3.3540206777936254	CCTTTGTA
chr15	35956777	35956778	chr15:35956778:C:A	rs1397255	C	A	C	Sox2_MA0143.3	7	1	-	8.676919043985553	9.613475778572903	CCATTGTG
chr15	36099638	36099639	chr15:36099639:T:C	rs77211547	T	C	T	Sox2_MA0143.3	11	0	-	0	0	.
chr15	36099644	36099645	chr15:36099645:C:A	rs11636565	C	A	C	Sox2_MA0143.3	5	1	-	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr15	36134178	36134179	chr15:36134179:C:G	rs4143929	C	G	C	Sox2_MA0143.3	26	0	+	0	0	.
chr15	36185159	36185160	chr15:36185160:C:T	rs1435695	C	T	T	Sox2_MA0143.3	-2	0	+	0	0	.
chr15	36526951	36526952	chr15:36526952:C:G	rs8042165	C	G	G	Sox2_MA0143.3	23	0	-	0	0	.
chr15	36806503	36806504	chr15:36806504:A:G	rs77584544	A	G	G	Sox2_MA0143.3	19	0	+	0	0	.
chr15	36886323	36886324	chr15:36886324:G:A	rs7173770	G	A	A	Sox2_MA0143.3	25	0	-	0	0	.
chr15	36912432	36912433	chr15:36912433:C:T	rs74958344	C	T	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr15	36917616	36917617	chr15:36917617:T:C	rs10518916	T	C	T	Sox2_MA0143.3	17	0	-	0	0	.
chr15	36964991	36964992	chr15:36964992:C:T	rs12592636	C	T	C	Sox2_MA0143.3	0	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr15	37092082	37092083	chr15:37092083:A:G	rs2701523	A	G	A	Sox2_MA0143.3	15	0	-	0	0	.
chr15	37097140	37097141	chr15:37097141:G:A	rs80249975	G	A	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr15	37107184	37107185	chr15:37107185:C:A	rs115293671	C	A	C	Sox2_MA0143.3	10	0	-	0	0	.
chr15	37199065	37199066	chr15:37199066:G:A	rs62047767	G	A	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr15	37359379	37359380	chr15:37359380:G:C	rs80109054	G	C	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr15	37362660	37362661	chr15:37362661:A:G	rs10451007	A	G	A	Sox2_MA0143.3	26	0	-	0	0	.
chr15	37362678	37362679	chr15:37362679:A:T	rs11854708	A	T	T	Sox2_MA0143.3	8	0	-	0	0	.
chr15	37773128	37773129	chr15:37773129:C:T	rs1498422	C	T	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr15	37854087	37854088	chr15:37854088:C:G	rs12438154	C	G	G	Sox2_MA0143.3	9	0	+	0	0	.
chr15	37866852	37866853	chr15:37866853:C:T	rs16923	C	T	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr15	37898452	37898453	chr15:37898453:G:T	rs10852009	G	T	T	Sox2_MA0143.3	5	1	+	9.206767037375712	2.298012258060492	CCTTTGTC
chr15	37978568	37978569	chr15:37978569:T:C	rs12443080	T	C	C	Sox2_MA0143.3	11	0	+	0	0	.
chr15	38072665	38072666	chr15:38072666:C:T	rs182519773	C	T	C	Sox2_MA0143.3	14	0	-	0	0	.
chr15	38076873	38076874	chr15:38076874:C:G	rs7163684	C	G	G	Sox2_MA0143.3	-5	0	+	0	0	.
chr15	38224945	38224946	chr15:38224946:A:G	rs17647739	A	G	A	Sox2_MA0143.3	6	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr15	38253811	38253812	chr15:38253812:G:A	rs566645747	G	A	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr15	38294459	38294460	chr15:38294460:G:T	rs3933169	G	T	T	Sox2_MA0143.3	8	0	+	0	0	.
chr15	38444828	38444829	chr15:38444829:T:C	rs6495972	T	C	C	Sox2_MA0143.3	16	0	+	0	0	.
chr15	38549708	38549709	chr15:38549709:T:G	rs149677326	T	G	T	Sox2_MA0143.3	12	0	+	0	0	.
chr15	38605974	38605975	chr15:38605975:A:G	rs16967099	A	G	G	Sox2_MA0143.3	23	0	-	0	0	.
chr15	38606016	38606017	chr15:38606017:C:T	rs555626538	C	T	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr15	38618024	38618025	chr15:38618025:T:A	rs117807093	T	A	T	Sox2_MA0143.3	-16	0	+	0	0	.
chr15	38702560	38702561	chr15:38702561:A:G	chr15:38702561:A:G	A	G	a	Sox2_MA0143.3	17	0	-	0	0	.
chr15	38951255	38951256	chr15:38951256:A:G	rs1433895	A	G	A	Sox2_MA0143.3	9	0	-	0	0	.
chr15	38991747	38991748	chr15:38991748:G:A	rs114776735	G	A	G	Sox2_MA0143.3	16	0	-	0	0	.
chr15	38991777	38991778	chr15:38991778:C:T	rs10851375	C	T	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr15	38996399	38996400	chr15:38996400:A:C	rs11070167	A	C	A	Sox2_MA0143.3	-8	0	-	0	0	.
chr15	39019427	39019428	chr15:39019428:A:G	rs1460800	A	G	G	Sox2_MA0143.3	17	0	-	0	0	.
chr15	39030220	39030221	chr15:39030221:A:G	rs10851378	A	G	A	Sox2_MA0143.3	8	0	-	0	0	.
chr15	39099502	39099503	chr15:39099503:G:A	rs35064685	G	A	G	Sox2_MA0143.3	7	1	+	8.676919043985553	3.3675628303222993	CCATTGTG
chr15	39144842	39144843	chr15:39144843:G:A	rs58833181	G	A	G	Sox2_MA0143.3	21	0	-	0	0	.
chr15	39181151	39181152	chr15:39181152:G:A	rs138590746	G	A	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr15	39181290	39181291	chr15:39181291:C:T	rs1374197772	C	T	C	Sox2_MA0143.3	10	0	-	0	0	.
chr15	39248376	39248377	chr15:39248377:A:G	rs156791	A	G	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr15	39269614	39269615	chr15:39269615:T:G	rs156800	T	G	G	Sox2_MA0143.3	12	0	-	0	0	.
chr15	39305091	39305092	chr15:39305092:C:T	rs3892720	C	T	C	Sox2_MA0143.3	15	0	-	0	0	.
chr15	39358370	39358371	chr15:39358371:G:C	rs16968920	G	C	G	Sox2_MA0143.3	-3	0	+	0	0	.
chr15	39395249	39395250	chr15:39395250:G:T	rs77600492	G	T	G	Sox2_MA0143.3	9	0	-	0	0	.
chr15	39454315	39454316	chr15:39454316:T:C	rs74866128	T	C	T	Sox2_MA0143.3	2	1	+	8.864090315184848	2.5582713367092715	CCTTTGTG
chr15	39550212	39550213	chr15:39550213:G:A	rs72725041	G	A	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr15	39583663	39583664	chr15:39583664:C:T	rs112782285	C	T	C	Sox2_MA0143.3	17	0	-	0	0	.
chr15	39592465	39592466	chr15:39592466:G:A	rs45461294	G	A	A	Sox2_MA0143.3	13	0	-	0	0	.
chr15	39616777	39616778	chr15:39616778:G:A	rs149981629	G	A	G	Sox2_MA0143.3	21	0	-	0	0	.
chr15	39631331	39631332	chr15:39631332:T:G	rs16969451	T	G	G	Sox2_MA0143.3	10	0	-	0	0	.
chr15	39704829	39704830	chr15:39704830:A:G	rs768663	A	G	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr15	39716785	39716786	chr15:39716786:C:A	rs117187944	C	A	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr15	39823718	39823719	chr15:39823719:A:C	rs275721	A	C	C	Sox2_MA0143.3	21	0	+	0	0	.
chr15	39831147	39831148	chr15:39831148:T:C	rs17718330	T	C	T	Sox2_MA0143.3	2	1	-	9.613475778572903	3.494828071296623	CCATTGTT
chr15	39961953	39961954	chr15:39961954:A:G	rs510949	A	G	G	Sox2_MA0143.3	4	1	-	8.864090315184848	1.9553355358696274	CCTTTGTG
chr15	39983732	39983733	chr15:39983733:C:T	rs138522495	C	T	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr15	39984769	39984770	chr15:39984770:C:T	rs117148677	C	T	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr15	40038674	40038675	chr15:40038675:C:T	rs3986354	C	T	C	Sox2_MA0143.3	9	0	+	0	0	.
chr15	40060413	40060414	chr15:40060414:A:T	rs4924414	A	T	A	Sox2_MA0143.3	-9	0	+	0	0	.
chr15	40069229	40069230	chr15:40069230:C:T	rs142393413	C	T	C	Sox2_MA0143.3	21	0	-	0	0	.
chr15	40074507	40074508	chr15:40074508:G:T	rs4924416	G	T	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr15	40079176	40079177	chr15:40079177:C:G	rs16970321	C	G	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr15	40081866	40081867	chr15:40081867:G:A	rs185731664	G	A	g	Sox2_MA0143.3	-17	0	+	0	0	.
chr15	40091577	40091578	chr15:40091578:A:C	rs3743129	A	C	A	Sox2_MA0143.3	3	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr15	40162194	40162195	chr15:40162195:A:G	rs77502813	A	G	A	Sox2_MA0143.3	21	0	-	0	0	.
chr15	40243219	40243220	chr15:40243220:A:G	rs12443488	A	G	A	Sox2_MA0143.3	4	1	-	9.800647049772198	2.8918922704569785	CCTTTGTT
chr15	40278651	40278652	chr15:40278652:G:C	rs113563765	G	C	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr15	40290891	40290892	chr15:40290892:A:G	rs2412506	A	G	G	Sox2_MA0143.3	21	0	+	0	0	.
chr15	40327541	40327542	chr15:40327542:T:G	rs1077476	T	G	T	Sox2_MA0143.3	18	0	-	0	0	.
chr15	40332549	40332550	chr15:40332550:A:G	rs76448349	A	G	A	Sox2_MA0143.3	-4	0	+	0	0	.
chr15	40332572	40332573	chr15:40332573:C:G	rs4924454	C	G	G	Sox2_MA0143.3	19	0	+	0	0	.
chr15	40495791	40495792	chr15:40495792:G:A	rs74441045	G	A	G	Sox2_MA0143.3	25	0	+	0	0	.
chr15	40582921	40582922	chr15:40582922:G:A	rs145217234	G	A	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr15	40593856	40593857	chr15:40593857:G:A	rs754845444	G	A	G	Sox2_MA0143.3	10	0	-	0	0	.
chr15	40842896	40842897	chr15:40842897:C:G	rs931492747	C	G	c	Sox2_MA0143.3	-11	0	+	0	0	.
chr15	40844244	40844245	chr15:40844245:C:T	rs60442578	C	T	c	Sox2_MA0143.3	-4	0	+	0	0	.
chr15	40983356	40983357	chr15:40983357:A:G	rs528144481	A	G	A	Sox2_MA0143.3	4	1	-	3.5547341015215945	-3.3540206777936254	CCTTTGTA
chr15	40998662	40998663	chr15:40998663:T:C	rs7162992	T	C	T	Sox2_MA0143.3	-16	0	-	0	0	.
chr15	41134052	41134053	chr15:41134053:A:G	rs57393155	A	G	G	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr15	41249956	41249957	chr15:41249957:C:T	rs76907022	C	T	C	Sox2_MA0143.3	16	0	+	0	0	.
chr15	41284339	41284340	chr15:41284340:G:A	rs11633799	G	A	G	Sox2_MA0143.3	-11	0	+	0	0	.
chr15	41294599	41294600	chr15:41294600:A:G	rs7163649	A	G	G	Sox2_MA0143.3	24	0	+	0	0	.
chr15	41417144	41417145	chr15:41417145:A:G	rs564516997	A	G	A	Sox2_MA0143.3	18	0	+	0	0	.
chr15	41417147	41417148	chr15:41417148:G:A	rs1364237487	G	A	G	Sox2_MA0143.3	21	0	+	0	0	.
chr15	41498261	41498262	chr15:41498262:C:T	rs1757460	C	T	C	Sox2_MA0143.3	27	0	-	0	0	.
chr15	41543878	41543879	chr15:41543879:A:T	rs144213744	A	T	A	Sox2_MA0143.3	-13	0	-	0	0	.
chr15	41562016	41562017	chr15:41562017:A:C	chr15:41562017:A:C	A	C	A	Sox2_MA0143.3	14	0	-	0	0	.
chr15	41773780	41773781	chr15:41773781:C:T	rs117622984	C	T	C	Sox2_MA0143.3	22	0	-	0	0	.
chr15	41842324	41842325	chr15:41842325:C:T	rs1648833	C	T	C	Sox2_MA0143.3	14	0	-	0	0	.
chr15	41857307	41857308	chr15:41857308:G:C	rs12442525	G	C	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr15	41909140	41909141	chr15:41909141:A:G	rs1704389	A	G	G	Sox2_MA0143.3	26	0	+	0	0	.
chr15	41921306	41921307	chr15:41921307:C:T	rs114367575	C	T	c	Sox2_MA0143.3	-8	0	-	0	0	.
chr15	41942066	41942067	chr15:41942067:T:G	rs2665213	T	G	T	Sox2_MA0143.3	3	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr15	41947206	41947207	chr15:41947207:T:C	rs1614170	T	C	C	Sox2_MA0143.3	27	0	-	0	0	.
chr15	41951602	41951603	chr15:41951603:G:A	rs1704405	G	A	A	Sox2_MA0143.3	-6	0	+	0	0	.
chr15	42041949	42041950	chr15:42041950:C:T	rs1712431	C	T	C	Sox2_MA0143.3	11	0	-	0	0	.
chr15	42043278	42043279	chr15:42043279:G:A	rs1712434	G	A	A	Sox2_MA0143.3	20	0	+	0	0	.
chr15	42069400	42069401	chr15:42069401:G:A	rs755599	G	A	G	Sox2_MA0143.3	20	0	-	0	0	.
chr15	42069659	42069660	chr15:42069660:C:T	rs183831142	C	T	C	Sox2_MA0143.3	27	0	-	0	0	.
chr15	42087853	42087854	chr15:42087854:A:G	rs76354757	A	G	A	Sox2_MA0143.3	-5	0	+	0	0	.
chr15	42093418	42093419	chr15:42093419:G:A	rs7162019	G	A	A	Sox2_MA0143.3	12	0	-	0	0	.
chr15	42121685	42121686	chr15:42121686:G:C	rs776715	G	C	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr15	42121711	42121712	chr15:42121712:G:A	rs776714	G	A	A	Sox2_MA0143.3	17	0	+	0	0	.
chr15	42123779	42123780	chr15:42123780:A:C	rs12912374	A	C	A	Sox2_MA0143.3	6	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr15	42143844	42143845	chr15:42143845:G:A	rs681264	G	A	G	Sox2_MA0143.3	13	0	-	0	0	.
chr15	42143870	42143871	chr15:42143871:C:T	rs77217281	C	T	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr15	42148622	42148623	chr15:42148623:C:T	rs75592276	C	T	C	Sox2_MA0143.3	24	0	-	0	0	.
chr15	42363789	42363790	chr15:42363790:C:T	rs728509	C	T	T	Sox2_MA0143.3	24	0	-	0	0	.
chr15	42691957	42691958	chr15:42691958:C:G	rs201643568	C	G	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr15	42728091	42728092	chr15:42728092:C:G	rs112759032	C	G	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr15	42921042	42921043	chr15:42921043:C:T	rs148961704	C	T	C	Sox2_MA0143.3	10	0	-	0	0	.
chr15	43250503	43250504	chr15:43250504:T:A	rs825735	T	A	T	Sox2_MA0143.3	24	0	-	0	0	.
chr15	43271038	43271039	chr15:43271039:T:C	rs1814323	T	C	T	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr15	43516258	43516259	chr15:43516259:G:A	rs151149590	G	A	G	Sox2_MA0143.3	24	0	+	0	0	.
chr15	43517125	43517126	chr15:43517126:C:G	rs150149143	C	G	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr15	43592934	43592935	chr15:43592935:C:T	rs149445565	C	T	C	Sox2_MA0143.3	10	0	+	0	0	.
chr15	43622174	43622175	chr15:43622175:T:C	rs8038068	T	C	T	Sox2_MA0143.3	4	1	+	3.5547341015215945	-3.3540206777936254	CCTTTGTA
chr15	43791430	43791431	chr15:43791431:C:G	rs115553516	C	G	C	Sox2_MA0143.3	0	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr15	44546648	44546649	chr15:44546649:T:C	rs74592528	T	C	T	Sox2_MA0143.3	2	1	-	9.019595766176417	2.900948058900136	CCATTGTC
chr15	44670485	44670486	chr15:44670486:C:T	rs117096146	C	T	C	Sox2_MA0143.3	9	0	+	0	0	.
chr15	44710502	44710503	chr15:44710503:T:C	rs78335029	T	C	T	Sox2_MA0143.3	-18	0	+	0	0	.
chr15	44710534	44710535	chr15:44710535:T:C	rs3759876	T	C	T	Sox2_MA0143.3	14	0	+	0	0	.
chr15	44725644	44725645	chr15:44725645:T:C	rs77161700	T	C	T	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr15	45022395	45022396	chr15:45022396:C:G	rs3759890	C	G	g	Sox2_MA0143.3	20	0	-	0	0	.
chr15	45023115	45023116	chr15:45023116:G:A	rs142954900	G	A	g	Sox2_MA0143.3	21	0	-	0	0	.
chr15	45048813	45048814	chr15:45048814:T:C	rs1425581239	T	C	N	Sox2_MA0143.3	22	0	-	0	0	.
chr15	45073563	45073564	chr15:45073564:T:C	rs1042097	T	C	N	Sox2_MA0143.3	20	0	-	0	0	.
chr15	45105794	45105795	chr15:45105795:C:T	rs138353181	C	T	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr15	45179290	45179291	chr15:45179291:C:T	rs1648307	C	T	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr15	45179315	45179316	chr15:45179316:C:G	rs531020913	C	G	C	Sox2_MA0143.3	18	0	+	0	0	.
chr15	45198572	45198573	chr15:45198573:A:G	rs75620472	A	G	A	Sox2_MA0143.3	-18	0	+	0	0	.
chr15	45198574	45198575	chr15:45198575:C:T	rs12323957	C	T	c	Sox2_MA0143.3	-16	0	+	0	0	.
chr15	45198578	45198579	chr15:45198579:C:T	rs181519418	C	T	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr15	45200378	45200379	chr15:45200379:A:G	rs188634829	A	G	A	Sox2_MA0143.3	-19	0	+	0	0	.
chr15	45200407	45200408	chr15:45200408:C:T	rs184259195	C	T	C	Sox2_MA0143.3	10	0	+	0	0	.
chr15	45200410	45200411	chr15:45200411:A:G	rs988843093	A	G	A	Sox2_MA0143.3	13	0	+	0	0	.
chr15	45200417	45200418	chr15:45200418:T:C	rs917822614	T	C	T	Sox2_MA0143.3	20	0	+	0	0	.
chr15	45201234	45201235	chr15:45201235:T:C	chr15:45201235:T:C	T	C	T	Sox2_MA0143.3	2	1	-	9.613475778572903	3.494828071296623	CCATTGTT
chr15	45201240	45201241	chr15:45201241:G:T	rs534166588	G	T	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr15	45201249	45201250	chr15:45201250:C:G	rs2458239	C	G	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr15	45234514	45234515	chr15:45234515:C:T	rs12904265	C	T	C	Sox2_MA0143.3	21	0	-	0	0	.
chr15	45241775	45241776	chr15:45241776:T:C	rs28897155	T	C	C	Sox2_MA0143.3	-12	0	-	0	0	.
chr15	45242523	45242524	chr15:45242524:A:C	rs4775831	A	C	C	Sox2_MA0143.3	22	0	-	0	0	.
chr15	45249283	45249284	chr15:45249284:G:A	rs114560015	G	A	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr15	45346932	45346933	chr15:45346933:C:T	rs11852800	C	T	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr15	45384703	45384704	chr15:45384704:T:A	rs66939267	T	A	T	Sox2_MA0143.3	-11	0	+	0	0	.
chr15	45540751	45540752	chr15:45540752:C:T	rs73416491	C	T	C	Sox2_MA0143.3	16	0	+	0	0	.
chr15	45642546	45642547	chr15:45642547:A:T	rs629466	A	T	T	Sox2_MA0143.3	13	0	+	0	0	.
chr15	45802429	45802430	chr15:45802430:C:A	rs747106566	C	A	C	Sox2_MA0143.3	20	0	+	0	0	.
chr15	45923956	45923957	chr15:45923957:T:C	rs11855962	T	C	C	Sox2_MA0143.3	22	0	+	0	0	.
chr15	46226187	46226188	chr15:46226188:C:T	rs17648704	C	T	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr15	46251726	46251727	chr15:46251727:A:G	rs1821475	A	G	A	Sox2_MA0143.3	-4	0	-	0	0	.
chr15	46486947	46486948	chr15:46486948:A:C	chr15:46486948:A:C	A	C	A	Sox2_MA0143.3	16	0	+	0	0	.
chr15	46556371	46556372	chr15:46556372:C:T	rs2163524	C	T	C	Sox2_MA0143.3	14	0	+	0	0	.
chr15	46574545	46574546	chr15:46574546:A:T	rs1400419	A	T	A	Sox2_MA0143.3	-13	0	-	0	0	.
chr15	46652455	46652456	chr15:46652456:C:T	rs7183405	C	T	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr15	46925139	46925140	chr15:46925140:C:T	rs72727792	C	T	C	Sox2_MA0143.3	10	0	-	0	0	.
chr15	47265857	47265858	chr15:47265858:C:T	rs149759580	C	T	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr15	47305425	47305426	chr15:47305426:C:T	rs17358764	C	T	C	Sox2_MA0143.3	15	0	+	0	0	.
chr15	47356610	47356611	chr15:47356611:A:G	rs1496922	A	G	G	Sox2_MA0143.3	-16	0	-	0	0	.
chr15	47470922	47470923	chr15:47470923:C:T	rs73388934	C	T	T	Sox2_MA0143.3	15	0	+	0	0	.
chr15	47474465	47474466	chr15:47474466:T:C	rs56342217	T	C	t	Sox2_MA0143.3	-4	0	-	0	0	.
chr15	47588180	47588181	chr15:47588181:G:T	rs28703303	G	T	G	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr15	47929420	47929421	chr15:47929421:C:T	rs75020864	C	T	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr15	47955273	47955274	chr15:47955274:T:C	rs1377678	T	C	T	Sox2_MA0143.3	-7	0	-	0	0	.
chr15	48066925	48066926	chr15:48066926:G:A	rs145951002	G	A	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr15	48178313	48178314	chr15:48178314:G:A	rs751579900	G	A	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr15	48297783	48297784	chr15:48297784:A:G	rs17350938	A	G	A	Sox2_MA0143.3	21	0	+	0	0	.
chr15	48318341	48318342	chr15:48318342:T:C	rs74014506	T	C	C	Sox2_MA0143.3	8	0	+	0	0	.
chr15	48394112	48394113	chr15:48394113:C:T	rs8042740	C	T	T	Sox2_MA0143.3	-18	0	-	0	0	.
chr15	48406734	48406735	chr15:48406735:C:T	rs73390270	C	T	T	Sox2_MA0143.3	19	0	-	0	0	.
chr15	48460347	48460348	chr15:48460348:G:A	rs115751161	G	A	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr15	48506550	48506551	chr15:48506551:T:C	chr15:48506551:T:C	T	C	T	Sox2_MA0143.3	-2	0	-	0	0	.
chr15	48666765	48666766	chr15:48666766:C:T	rs73398311	C	T	c	Sox2_MA0143.3	-3	0	-	0	0	.
chr15	48861395	48861396	chr15:48861396:T:G	rs76622101	T	G	T	Sox2_MA0143.3	-13	0	+	0	0	.
chr15	48915032	48915033	chr15:48915033:C:T	rs72739902	C	T	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr15	48929683	48929684	chr15:48929684:G:A	rs2413922	G	A	A	Sox2_MA0143.3	-16	0	-	0	0	.
chr15	48975502	48975503	chr15:48975503:C:T	rs73404227	C	T	C	Sox2_MA0143.3	17	0	+	0	0	.
chr15	49084426	49084427	chr15:49084427:T:C	chr15:49084427:T:C	T	C	T	Sox2_MA0143.3	6	1	+	9.206767037375712	2.298012258060492	CCTTTGTC
chr15	49084426	49084427	chr15:49084427:T:G	rs77468143	T	G	T	Sox2_MA0143.3	6	1	+	9.206767037375712	2.298012258060492	CCTTTGTC
chr15	49131525	49131526	chr15:49131526:G:T	rs600863	G	T	G	Sox2_MA0143.3	18	0	+	0	0	.
chr15	49444708	49444709	chr15:49444709:G:T	rs12594154	G	T	T	Sox2_MA0143.3	19	0	+	0	0	.
chr15	49529634	49529635	chr15:49529635:C:T	rs8029561	C	T	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr15	49543424	49543425	chr15:49543425:T:C	rs4775814	T	C	T	Sox2_MA0143.3	15	0	+	0	0	.
chr15	49543435	49543436	chr15:49543436:T:C	rs72729180	T	C	t	Sox2_MA0143.3	26	0	+	0	0	.
chr15	49708074	49708075	chr15:49708075:C:T	rs7180421	C	T	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr15	49829022	49829023	chr15:49829023:A:G	rs1337576574	A	G	A	Sox2_MA0143.3	8	0	+	0	0	.
chr15	49832915	49832916	chr15:49832916:C:T	rs965751611	C	T	C	Sox2_MA0143.3	18	0	-	0	0	.
chr15	49845449	49845450	chr15:49845450:C:T	rs11070732	C	T	T	Sox2_MA0143.3	-9	0	-	0	0	.
chr15	49896097	49896098	chr15:49896098:A:G	rs77203976	A	G	A	Sox2_MA0143.3	-19	0	-	0	0	.
chr15	49902649	49902650	chr15:49902650:G:C	rs937170	G	C	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr15	49926756	49926757	chr15:49926757:C:A	rs4632079	C	A	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr15	49982443	49982444	chr15:49982444:T:G	rs113821015	T	G	T	Sox2_MA0143.3	-9	0	-	0	0	.
chr15	50058486	50058487	chr15:50058487:C:T	rs11070743	C	T	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr15	50058488	50058489	chr15:50058489:T:A	rs10162988	T	A	A	Sox2_MA0143.3	-17	0	-	0	0	.
chr15	50106799	50106800	chr15:50106800:G:A	rs28416764	G	A	G	Sox2_MA0143.3	17	0	+	0	0	.
chr15	50124353	50124354	chr15:50124354:C:T	rs8038609	C	T	C	Sox2_MA0143.3	15	0	+	0	0	.
chr15	50136774	50136775	chr15:50136775:G:A	rs8037555	G	A	G	Sox2_MA0143.3	27	0	+	0	0	.
chr15	50145529	50145530	chr15:50145530:C:T	rs142252819	C	T	c	Sox2_MA0143.3	25	0	-	0	0	.
chr15	50150599	50150600	chr15:50150600:G:C	rs75898505	G	C	G	Sox2_MA0143.3	0	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr15	50314554	50314555	chr15:50314555:C:G	rs11638319	C	G	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr15	50318893	50318894	chr15:50318894:G:C	rs73399285	G	C	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr15	50354508	50354509	chr15:50354509:C:G	chr15:50354509:C:G	C	G	C	Sox2_MA0143.3	14	0	-	0	0	.
chr15	50354523	50354524	chr15:50354524:G:A	rs538964833	G	A	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr15	50354532	50354533	chr15:50354533:C:A	chr15:50354533:C:A	C	A	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr15	50392222	50392223	chr15:50392223:G:A	rs75302388	G	A	A	Sox2_MA0143.3	24	0	+	0	0	.
chr15	50735326	50735327	chr15:50735327:C:T	rs11855370	C	T	C	Sox2_MA0143.3	17	0	+	0	0	.
chr15	50816075	50816076	chr15:50816076:G:A	rs4775905	G	A	G	Sox2_MA0143.3	8	0	+	0	0	.
chr15	50881149	50881150	chr15:50881150:G:A	rs757841118	G	A	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr15	51004363	51004364	chr15:51004364:A:G	rs118060423	A	G	A	Sox2_MA0143.3	3	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr15	51095917	51095918	chr15:51095918:A:G	rs4598846	A	G	G	Sox2_MA0143.3	-5	0	+	0	0	.
chr15	51223857	51223858	chr15:51223858:C:A	rs2899472	C	A	C	Sox2_MA0143.3	0	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr15	51223871	51223872	chr15:51223872:G:T	rs189205482	G	T	G	Sox2_MA0143.3	14	0	+	0	0	.
chr15	51261079	51261080	chr15:51261080:C:T	rs28520437	C	T	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr15	51261080	51261081	chr15:51261081:G:A	rs76084537	G	A	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr15	51614139	51614140	chr15:51614140:C:T	rs2124878	C	T	C	Sox2_MA0143.3	13	0	-	0	0	.
chr15	51906111	51906112	chr15:51906112:G:A	rs947720734	G	A	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr15	52011093	52011094	chr15:52011094:T:C	rs138957319	T	C	T	Sox2_MA0143.3	22	0	+	0	0	.
chr15	52011974	52011975	chr15:52011975:C:G	rs148611695	C	G	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr15	52019510	52019511	chr15:52019511:C:T	rs1401981034	C	T	-	Sox2_MA0143.3	19	0	-	0	0	.
chr15	52019512	52019513	chr15:52019513:G:A	rs1231247643	G	A	-	Sox2_MA0143.3	17	0	-	0	0	.
chr15	52050474	52050475	chr15:52050475:A:G	rs376038866	A	G	A	Sox2_MA0143.3	17	0	+	0	0	.
chr15	52077530	52077531	chr15:52077531:T:C	rs2414128	T	C	C	Sox2_MA0143.3	26	0	-	0	0	.
chr15	52137575	52137576	chr15:52137576:C:T	rs10518677	C	T	C	Sox2_MA0143.3	5	1	-	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr15	52140072	52140073	chr15:52140073:G:A	rs76726496	G	A	G	Sox2_MA0143.3	21	0	-	0	0	.
chr15	52171295	52171296	chr15:52171296:A:G	rs17612796	A	G	A	Sox2_MA0143.3	20	0	+	0	0	.
chr15	52185012	52185013	chr15:52185013:C:T	rs4776015	C	T	T	Sox2_MA0143.3	-5	0	-	0	0	.
chr15	52186274	52186275	chr15:52186275:A:T	rs12907074	A	T	T	Sox2_MA0143.3	22	0	-	0	0	.
chr15	52244215	52244216	chr15:52244216:C:T	rs10152377	C	T	T	Sox2_MA0143.3	11	0	-	0	0	.
chr15	52251417	52251418	chr15:52251418:G:T	rs72734946	G	T	G	Sox2_MA0143.3	0	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr15	52281322	52281323	chr15:52281323:A:C	rs8040562	A	C	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr15	52486713	52486714	chr15:52486714:G:A	rs11853114	G	A	A	Sox2_MA0143.3	0	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr15	52528779	52528780	chr15:52528780:C:T	chr15:52528780:C:T	C	T	C	Sox2_MA0143.3	1	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr15	52558268	52558269	chr15:52558269:C:T	rs78642752	C	T	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr15	52568042	52568043	chr15:52568043:C:G	rs185951854	C	G	C	Sox2_MA0143.3	16	0	-	0	0	.
chr15	52568074	52568075	chr15:52568075:T:C	rs1724610	T	C	T	Sox2_MA0143.3	-16	0	-	0	0	.
chr15	52649913	52649914	chr15:52649914:G:A	rs10851521	G	A	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr15	52695505	52695506	chr15:52695506:C:T	rs8043101	C	T	C	Sox2_MA0143.3	20	0	+	0	0	.
chr15	52944355	52944356	chr15:52944356:G:A	rs28633650	G	A	G	Sox2_MA0143.3	9	0	-	0	0	.
chr15	53029934	53029935	chr15:53029935:T:A	rs2639680	T	A	T	Sox2_MA0143.3	-8	0	+	0	0	.
chr15	53029950	53029951	chr15:53029951:A:G	rs2651512	A	G	A	Sox2_MA0143.3	8	0	+	0	0	.
chr15	53129355	53129356	chr15:53129356:C:A	rs543018	C	A	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr15	53142758	53142759	chr15:53142759:G:A	rs72728988	G	A	G	Sox2_MA0143.3	5	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr15	53142766	53142767	chr15:53142767:C:T	rs72728989	C	T	C	Sox2_MA0143.3	13	0	+	0	0	.
chr15	53196505	53196506	chr15:53196506:C:T	rs192100018	C	T	C	Sox2_MA0143.3	7	1	-	8.676919043985553	3.3675628303222993	CCATTGTG
chr15	53427138	53427139	chr15:53427139:A:G	rs10431760	A	G	a	Sox2_MA0143.3	4	1	-	8.676919043985553	1.7681642646703322	CCATTGTG
chr15	53454732	53454733	chr15:53454733:C:A	rs12439545	C	A	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr15	53455627	53455628	chr15:53455628:A:T	rs603719	A	T	A	Sox2_MA0143.3	-12	0	+	0	0	.
chr15	53521130	53521131	chr15:53521131:T:C	rs546942	T	C	C	Sox2_MA0143.3	15	0	-	0	0	.
chr15	53521727	53521728	chr15:53521728:T:G	rs2414241	T	G	T	Sox2_MA0143.3	2	1	-	9.613475778572903	3.494828071296623	CCATTGTT
chr15	53569932	53569933	chr15:53569933:T:C	rs575505829	T	C	T	Sox2_MA0143.3	25	0	+	0	0	.
chr15	53639738	53639739	chr15:53639739:G:A	rs16966350	G	A	A	Sox2_MA0143.3	26	0	+	0	0	.
chr15	53758505	53758506	chr15:53758506:G:A	rs1107729	G	A	A	Sox2_MA0143.3	17	0	-	0	0	.
chr15	53758518	53758519	chr15:53758519:A:G	rs758752730	A	G	A	Sox2_MA0143.3	4	1	-	9.206767037375712	2.2980122580604916	CCTTTGTC
chr15	53758680	53758681	chr15:53758681:G:T	rs1107730	G	T	T	Sox2_MA0143.3	-7	0	-	0	0	.
chr15	53808894	53808895	chr15:53808895:A:T	rs481581	A	T	A	Sox2_MA0143.3	-17	0	+	0	0	.
chr15	53875678	53875679	chr15:53875679:C:A	rs9672427	C	A	C	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr15	53972611	53972612	chr15:53972612:A:G	rs993203151	A	G	A	Sox2_MA0143.3	3	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr15	53991479	53991480	chr15:53991480:A:C	rs2725596	A	C	A	Sox2_MA0143.3	-10	0	+	0	0	.
chr15	54099112	54099113	chr15:54099113:A:T	rs1864416	A	T	T	Sox2_MA0143.3	24	0	-	0	0	.
chr15	54210874	54210875	chr15:54210875:G:A	rs8038935	G	A	A	Sox2_MA0143.3	22	0	+	0	0	.
chr15	54404060	54404061	chr15:54404061:T:C	rs11635907	T	C	T	Sox2_MA0143.3	25	0	-	0	0	.
chr15	54518969	54518970	chr15:54518970:G:A	rs77027669	G	A	A	Sox2_MA0143.3	15	0	+	0	0	.
chr15	54559746	54559747	chr15:54559747:A:G	rs8032415	A	G	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr15	54599617	54599618	chr15:54599618:G:A	rs2414327	G	A	A	Sox2_MA0143.3	11	0	+	0	0	.
chr15	54790335	54790336	chr15:54790336:C:T	rs1566564	C	T	T	Sox2_MA0143.3	1	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr15	54844136	54844137	chr15:54844137:C:T	rs1915203	C	T	T	Sox2_MA0143.3	-3	0	+	0	0	.
chr15	55234681	55234682	chr15:55234682:T:A	rs142810797	T	A	T	Sox2_MA0143.3	-6	0	+	0	0	.
chr15	55343440	55343441	chr15:55343441:G:T	rs111910646	G	T	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr15	55552492	55552493	chr15:55552493:G:A	rs116949583	G	A	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr15	55741865	55741866	chr15:55741866:C:A	rs75316690	C	A	C	Sox2_MA0143.3	22	0	+	0	0	.
chr15	55791934	55791935	chr15:55791935:G:T	rs73412224	G	T	G	Sox2_MA0143.3	-16	0	-	0	0	.
chr15	55870964	55870965	chr15:55870965:C:T	rs66857236	C	T	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr15	56208931	56208932	chr15:56208932:A:T	rs75804032	A	T	A	Sox2_MA0143.3	-5	0	-	0	0	.
chr15	56208935	56208936	chr15:56208936:T:C	rs76712141	T	C	T	Sox2_MA0143.3	-9	0	-	0	0	.
chr15	56232527	56232528	chr15:56232528:T:C	rs58033458	T	C	T	Sox2_MA0143.3	22	0	+	0	0	.
chr15	56291861	56291862	chr15:56291862:T:C	rs2465973	T	C	T	Sox2_MA0143.3	15	0	-	0	0	.
chr15	56737222	56737223	chr15:56737223:A:T	rs147071122	A	T	A	Sox2_MA0143.3	-16	0	+	0	0	.
chr15	56770419	56770420	chr15:56770420:G:T	rs28575268	G	T	G	Sox2_MA0143.3	0	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr15	56821934	56821935	chr15:56821935:T:A	rs1028034823	T	A	T	Sox2_MA0143.3	9	0	-	0	0	.
chr15	56821942	56821943	chr15:56821943:G:A	chr15:56821943:G:A	G	A	G	Sox2_MA0143.3	1	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr15	56844760	56844761	chr15:56844761:C:A	rs12437714	C	A	C	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr15	56910719	56910720	chr15:56910720:T:C	rs12904784	T	C	T	Sox2_MA0143.3	8	0	+	0	0	.
chr15	57025869	57025870	chr15:57025870:A:G	rs76616229	A	G	A	Sox2_MA0143.3	23	0	+	0	0	.
chr15	57173167	57173168	chr15:57173168:T:G	rs7165729	T	G	T	Sox2_MA0143.3	8	0	+	0	0	.
chr15	57184105	57184106	chr15:57184106:C:G	rs9806657	C	G	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr15	57377427	57377428	chr15:57377428:A:G	rs75683540	A	G	A	Sox2_MA0143.3	3	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr15	57377661	57377662	chr15:57377662:T:C	rs114011135	T	C	T	Sox2_MA0143.3	6	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr15	57382850	57382851	chr15:57382851:C:A	rs28507951	C	A	C	Sox2_MA0143.3	26	0	-	0	0	.
chr15	57388342	57388343	chr15:57388343:T:C	rs1293396504	T	C	T	Sox2_MA0143.3	-1	0	+	0	0	.
chr15	57460521	57460522	chr15:57460522:A:T	rs61998128	A	T	A	Sox2_MA0143.3	8	0	-	0	0	.
chr15	57473043	57473044	chr15:57473044:G:C	rs75451877	G	C	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr15	57497201	57497202	chr15:57497202:C:A	rs1236352582	C	A	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr15	57510946	57510947	chr15:57510947:C:G	rs16977553	C	G	C	Sox2_MA0143.3	17	0	-	0	0	.
chr15	57571225	57571226	chr15:57571226:A:T	rs2932200	A	T	A	Sox2_MA0143.3	-11	0	-	0	0	.
chr15	57580506	57580507	chr15:57580507:C:T	rs17239937	C	T	C	Sox2_MA0143.3	11	0	+	0	0	.
chr15	57587271	57587272	chr15:57587272:G:A	rs1908199	G	A	G	Sox2_MA0143.3	-12	0	+	0	0	.
chr15	57681355	57681356	chr15:57681356:A:G	rs4774281	A	G	A	Sox2_MA0143.3	12	0	+	0	0	.
chr15	57703739	57703740	chr15:57703740:T:G	rs72745576	T	G	T	Sox2_MA0143.3	-1	0	+	0	0	.
chr15	57826161	57826162	chr15:57826162:G:C	rs1346123	G	C	C	Sox2_MA0143.3	16	0	+	0	0	.
chr15	57849464	57849465	chr15:57849465:T:G	rs146547433	T	G	T	Sox2_MA0143.3	-18	0	-	0	0	.
chr15	57923873	57923874	chr15:57923874:C:G	rs148335537	C	G	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr15	57923873	57923874	chr15:57923874:C:T	chr15:57923874:C:T	C	T	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr15	58113722	58113723	chr15:58113723:A:G	rs145974178	A	G	A	Sox2_MA0143.3	3	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr15	58186750	58186751	chr15:58186751:T:C	rs2077737	T	C	T	Sox2_MA0143.3	-20	0	+	0	0	.
chr15	58188083	58188084	chr15:58188084:C:G	rs4775021	C	G	C	Sox2_MA0143.3	16	0	+	0	0	.
chr15	58240530	58240531	chr15:58240531:T:C	rs16939960	T	C	T	Sox2_MA0143.3	11	0	+	0	0	.
chr15	58240540	58240541	chr15:58240541:G:C	rs11637278	G	C	G	Sox2_MA0143.3	21	0	+	0	0	.
chr15	58248184	58248185	chr15:58248185:A:G	rs935211	A	G	G	Sox2_MA0143.3	4	1	-	8.676919043985553	1.7681642646703322	CCATTGTG
chr15	58248202	58248203	chr15:58248203:C:T	rs74796208	C	T	T	Sox2_MA0143.3	-14	0	-	0	0	.
chr15	58264862	58264863	chr15:58264863:A:G	rs17821159	A	G	A	Sox2_MA0143.3	8	0	-	0	0	.
chr15	58332670	58332671	chr15:58332671:T:C	rs75831782	T	C	T	Sox2_MA0143.3	-15	0	-	0	0	.
chr15	58332921	58332922	chr15:58332922:T:G	rs1444940	T	G	T	Sox2_MA0143.3	-17	0	+	0	0	.
chr15	58346379	58346380	chr15:58346380:C:T	rs371097739	C	T	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr15	58383919	58383920	chr15:58383920:G:A	rs16940147	G	A	A	Sox2_MA0143.3	8	0	-	0	0	.
chr15	58389077	58389078	chr15:58389078:G:T	rs41502046	G	T	G	Sox2_MA0143.3	1	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr15	58406999	58407000	chr15:58407000:T:G	rs60808669	T	G	T	Sox2_MA0143.3	-1	0	+	0	0	.
chr15	58424447	58424448	chr15:58424448:C:G	rs12914524	C	G	C	Sox2_MA0143.3	9	0	-	0	0	.
chr15	58466348	58466349	chr15:58466349:G:A	rs12595191	G	A	A	Sox2_MA0143.3	12	0	+	0	0	.
chr15	58469836	58469837	chr15:58469837:G:A	rs183818879	G	A	G	Sox2_MA0143.3	-16	0	-	0	0	.
chr15	58475525	58475526	chr15:58475526:C:T	rs147021683	C	T	C	Sox2_MA0143.3	25	0	-	0	0	.
chr15	58475710	58475711	chr15:58475711:G:T	rs114604477	G	T	G	Sox2_MA0143.3	19	0	-	0	0	.
chr15	58516163	58516164	chr15:58516164:G:A	rs115700291	G	A	G	Sox2_MA0143.3	22	0	+	0	0	.
chr15	58517606	58517607	chr15:58517607:T:G	rs1979178	T	G	T	Sox2_MA0143.3	3	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr15	58520854	58520855	chr15:58520855:A:G	rs181776535	A	G	A	Sox2_MA0143.3	15	0	-	0	0	.
chr15	58526583	58526584	chr15:58526584:G:A	rs9652472	G	A	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr15	58535996	58535997	chr15:58535997:A:G	rs148076190	A	G	A	Sox2_MA0143.3	-8	0	+	0	0	.
chr15	58536017	58536018	chr15:58536018:G:T	rs11857019	G	T	T	Sox2_MA0143.3	13	0	+	0	0	.
chr15	58545757	58545758	chr15:58545758:A:G	rs6082	A	G	A	Sox2_MA0143.3	-1	0	+	0	0	.
chr15	58568437	58568438	chr15:58568438:T:C	rs150184166	T	C	T	Sox2_MA0143.3	15	0	-	0	0	.
chr15	58573324	58573325	chr15:58573325:C:T	rs149742371	C	T	C	Sox2_MA0143.3	20	0	+	0	0	.
chr15	58669148	58669149	chr15:58669149:T:C	rs8035960	T	C	t	Sox2_MA0143.3	-20	0	-	0	0	.
chr15	58783003	58783004	chr15:58783004:T:C	rs596094	T	C	c	Sox2_MA0143.3	3	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr15	58882339	58882340	chr15:58882340:G:T	rs7179456	G	T	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr15	58911415	58911416	chr15:58911416:T:C	rs10518992	T	C	T	Sox2_MA0143.3	-16	0	-	0	0	.
chr15	58987548	58987549	chr15:58987549:C:G	rs116750621	C	G	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr15	59171757	59171758	chr15:59171758:A:G	rs2306789	A	G	G	Sox2_MA0143.3	4	1	-	9.206767037375712	2.2980122580604916	CCTTTGTC
chr15	59225036	59225037	chr15:59225037:T:C	rs4775135	T	C	T	Sox2_MA0143.3	-4	0	+	0	0	.
chr15	59237375	59237376	chr15:59237376:C:T	rs8038705	C	T	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr15	59265318	59265319	chr15:59265319:C:A	rs7166002	C	A	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr15	59294409	59294410	chr15:59294410:T:C	rs117726217	T	C	T	Sox2_MA0143.3	15	0	-	0	0	.
chr15	59549685	59549686	chr15:59549686:G:A	rs67915343	G	A	A	Sox2_MA0143.3	-8	0	+	0	0	.
chr15	59573534	59573535	chr15:59573535:T:C	rs58112445	T	C	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr15	59834790	59834791	chr15:59834791:T:A	rs11632455	T	A	T	Sox2_MA0143.3	-15	0	-	0	0	.
chr15	59873093	59873094	chr15:59873094:T:A	rs4396479	T	A	T	Sox2_MA0143.3	-4	0	+	0	0	.
chr15	59966503	59966504	chr15:59966504:G:A	rs73421200	G	A	G	Sox2_MA0143.3	26	0	-	0	0	.
chr15	60007369	60007370	chr15:60007370:A:T	rs76727568	A	T	A	Sox2_MA0143.3	-5	0	-	0	0	.
chr15	60054642	60054643	chr15:60054643:A:G	rs182519690	A	G	A	Sox2_MA0143.3	-19	0	-	0	0	.
chr15	60067132	60067133	chr15:60067133:G:A	rs335800	G	A	G	Sox2_MA0143.3	27	0	+	0	0	.
chr15	60071100	60071101	chr15:60071101:C:T	rs990192529	C	T	c	Sox2_MA0143.3	5	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr15	60077741	60077742	chr15:60077742:G:A	rs11071501	G	A	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr15	60153114	60153115	chr15:60153115:A:G	rs73433264	A	G	A	Sox2_MA0143.3	2	1	+	8.676919043985553	2.5582713367092715	CCATTGTG
chr15	60159439	60159440	chr15:60159440:T:G	rs7177039	T	G	G	Sox2_MA0143.3	8	0	+	0	0	.
chr15	60260924	60260925	chr15:60260925:A:C	rs117614521	A	C	A	Sox2_MA0143.3	-1	0	-	0	0	.
chr15	60383492	60383493	chr15:60383493:T:C	rs17303041	T	C	T	Sox2_MA0143.3	17	0	-	0	0	.
chr15	60391259	60391260	chr15:60391260:C:G	rs540586215	C	G	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr15	60394270	60394271	chr15:60394271:A:G	rs1042581208	A	G	A	Sox2_MA0143.3	8	0	-	0	0	.
chr15	60395476	60395477	chr15:60395477:G:T	rs3940746	G	T	G	Sox2_MA0143.3	8	0	-	0	0	.
chr15	60510397	60510398	chr15:60510398:A:G	rs8028860	A	G	A	Sox2_MA0143.3	18	0	+	0	0	.
chr15	60586604	60586605	chr15:60586605:G:A	rs76263497	G	A	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr15	60649863	60649864	chr15:60649864:G:A	rs78725260	G	A	G	Sox2_MA0143.3	19	0	+	0	0	.
chr15	60704461	60704462	chr15:60704462:A:G	rs553184275	A	G	A	Sox2_MA0143.3	13	0	-	0	0	.
chr15	60704466	60704467	chr15:60704467:A:C	rs188269033	A	C	A	Sox2_MA0143.3	8	0	-	0	0	.
chr15	60706647	60706648	chr15:60706648:A:C	rs13329238	A	C	G	Sox2_MA0143.3	-12	0	+	0	0	.
chr15	60840447	60840448	chr15:60840448:T:C	rs111579293	T	C	T	Sox2_MA0143.3	23	0	-	0	0	.
chr15	60840452	60840453	chr15:60840453:A:G	rs1224251	A	G	A	Sox2_MA0143.3	18	0	-	0	0	.
chr15	60865888	60865889	chr15:60865889:C:T	rs7177996	C	T	T	Sox2_MA0143.3	-2	0	+	0	0	.
chr15	60883918	60883919	chr15:60883919:C:T	rs8039990	C	T	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr15	60884028	60884029	chr15:60884029:G:C	rs8040450	G	C	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr15	60969877	60969878	chr15:60969878:C:G	rs1523528	C	G	G	Sox2_MA0143.3	18	0	+	0	0	.
chr15	61057720	61057721	chr15:61057721:G:A	rs8037669	G	A	A	Sox2_MA0143.3	-5	0	+	0	0	.
chr15	61155757	61155758	chr15:61155758:T:C	rs142237644	T	C	T	Sox2_MA0143.3	9	0	-	0	0	.
chr15	61155772	61155773	chr15:61155773:G:T	rs79671947	G	T	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr15	61159109	61159110	chr15:61159110:T:C	rs114082317	T	C	T	Sox2_MA0143.3	-17	0	+	0	0	.
chr15	61159136	61159137	chr15:61159137:C:T	rs730754	C	T	T	Sox2_MA0143.3	10	0	+	0	0	.
chr15	61433517	61433518	chr15:61433518:C:A	rs79562589	C	A	C	Sox2_MA0143.3	1	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr15	61533483	61533484	chr15:61533484:C:T	rs7171338	C	T	C	Sox2_MA0143.3	0	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr15	61640889	61640890	chr15:61640890:C:T	rs4304962	C	T	T	Sox2_MA0143.3	-14	0	+	0	0	.
chr15	61640914	61640915	chr15:61640915:A:G	rs4511472	A	G	G	Sox2_MA0143.3	11	0	+	0	0	.
chr15	61683247	61683248	chr15:61683248:C:T	rs2254185	C	T	c	Sox2_MA0143.3	21	0	-	0	0	.
chr15	61702981	61702982	chr15:61702982:C:T	rs77196641	C	T	C	Sox2_MA0143.3	8	0	+	0	0	.
chr15	61812127	61812128	chr15:61812128:G:T	rs73426771	G	T	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr15	62052883	62052884	chr15:62052884:G:A	rs4372632	G	A	A	Sox2_MA0143.3	0	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr15	62083233	62083234	chr15:62083234:A:G	rs11636682	A	G	G	Sox2_MA0143.3	8	0	+	0	0	.
chr15	62254063	62254064	chr15:62254064:G:A	rs2611794	G	A	-	Sox2_MA0143.3	-12	0	-	0	0	.
chr15	62342061	62342062	chr15:62342062:G:C	rs35636114	G	C	G	Sox2_MA0143.3	25	0	-	0	0	.
chr15	62439756	62439757	chr15:62439757:T:C	rs376259570	T	C	T	Sox2_MA0143.3	-14	0	+	0	0	.
chr15	62444631	62444632	chr15:62444632:C:T	rs533357785	C	T	C	Sox2_MA0143.3	20	0	-	0	0	.
chr15	62444645	62444646	chr15:62444646:A:G	rs140288840	A	G	A	Sox2_MA0143.3	6	1	-	9.613475778572903	2.7047209992576837	CCATTGTT
chr15	62444645	62444646	chr15:62444646:A:T	chr15:62444646:A:T	A	T	A	Sox2_MA0143.3	6	1	-	9.613475778572903	2.7047209992576837	CCATTGTT
chr15	62444661	62444662	chr15:62444662:T:C	chr15:62444662:T:C	T	C	T	Sox2_MA0143.3	-10	0	-	0	0	.
chr15	62465657	62465658	chr15:62465658:A:G	rs17205757	A	G	A	Sox2_MA0143.3	3	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr15	62524846	62524847	chr15:62524847:A:G	rs7171486	A	G	G	Sox2_MA0143.3	25	0	+	0	0	.
chr15	62650224	62650225	chr15:62650225:T:G	rs78380253	T	G	T	Sox2_MA0143.3	10	0	+	0	0	.
chr15	62742349	62742350	chr15:62742350:C:T	rs118062369	C	T	C	Sox2_MA0143.3	5	1	-	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr15	62802308	62802309	chr15:62802309:A:G	rs4412927	A	G	A	Sox2_MA0143.3	-16	0	+	0	0	.
chr15	62834584	62834585	chr15:62834585:C:T	rs16945848	C	T	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr15	62834606	62834607	chr15:62834607:G:T	rs10519180	G	T	T	Sox2_MA0143.3	13	0	+	0	0	.
chr15	62836315	62836316	chr15:62836316:C:G	rs77978434	C	G	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr15	62906988	62906989	chr15:62906989:T:C	rs4362340	T	C	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr15	62934843	62934844	chr15:62934844:G:A	rs62007107	G	A	G	Sox2_MA0143.3	22	0	-	0	0	.
chr15	62942825	62942826	chr15:62942826:C:T	rs149387381	C	T	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr15	62949258	62949259	chr15:62949259:A:G	rs8029658	A	G	G	Sox2_MA0143.3	6	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr15	62972979	62972980	chr15:62972980:T:G	rs12708475	T	G	T	Sox2_MA0143.3	-16	0	+	0	0	.
chr15	62973008	62973009	chr15:62973009:G:A	rs57942809	G	A	A	Sox2_MA0143.3	13	0	+	0	0	.
chr15	62983525	62983526	chr15:62983526:A:G	rs4774463	A	G	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr15	62983543	62983544	chr15:62983544:C:T	rs1844291	C	T	C	Sox2_MA0143.3	10	0	+	0	0	.
chr15	62994932	62994933	chr15:62994933:G:C	rs74020953	G	C	G	Sox2_MA0143.3	19	0	+	0	0	.
chr15	63048873	63048874	chr15:63048874:C:A	rs11856618	C	A	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr15	63056171	63056172	chr15:63056172:T:C	rs72743223	T	C	T	Sox2_MA0143.3	2	1	+	3.5547341015215945	-2.751084876953981	CCTTTGTA
chr15	63056185	63056186	chr15:63056186:A:G	rs115383642	A	G	A	Sox2_MA0143.3	16	0	+	0	0	.
chr15	63056195	63056196	chr15:63056196:G:A	rs7166724	G	A	G	Sox2_MA0143.3	26	0	+	0	0	.
chr15	63063671	63063672	chr15:63063672:C:G	rs8042050	C	G	G	Sox2_MA0143.3	22	0	+	0	0	.
chr15	63094972	63094973	chr15:63094973:T:G	rs116963079	T	G	T	Sox2_MA0143.3	-14	0	+	0	0	.
chr15	63231655	63231656	chr15:63231656:G:C	rs13313493	G	C	G	Sox2_MA0143.3	0	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr15	63244075	63244076	chr15:63244076:T:A	rs35703701	T	A	T	Sox2_MA0143.3	19	0	-	0	0	.
chr15	63372875	63372876	chr15:63372876:C:T	rs115395900	C	T	C	Sox2_MA0143.3	14	0	+	0	0	.
chr15	63382270	63382271	chr15:63382271:G:C	rs941426345	G	C	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr15	63382288	63382289	chr15:63382289:C:G	rs899941050	C	G	C	Sox2_MA0143.3	1	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr15	63441550	63441551	chr15:63441551:G:A	rs117414794	G	A	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr15	63487552	63487553	chr15:63487553:T:C	rs11634587	T	C	T	Sox2_MA0143.3	25	0	-	0	0	.
chr15	63492455	63492456	chr15:63492456:T:G	rs28459128	T	G	T	Sox2_MA0143.3	-12	0	-	0	0	.
chr15	63505019	63505020	chr15:63505020:C:G	rs867544804	C	G	c	Sox2_MA0143.3	11	0	+	0	0	.
chr15	63513917	63513918	chr15:63513918:G:T	rs6494408	G	T	T	Sox2_MA0143.3	1	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr15	63553547	63553548	chr15:63553548:T:C	rs149865781	T	C	T	Sox2_MA0143.3	-12	0	+	0	0	.
chr15	63587035	63587036	chr15:63587036:T:C	rs28531781	T	C	C	Sox2_MA0143.3	-12	0	-	0	0	.
chr15	63595913	63595914	chr15:63595914:C:T	rs11852815	C	T	T	Sox2_MA0143.3	-7	0	-	0	0	.
chr15	63599649	63599650	chr15:63599650:C:T	rs117895308	C	T	C	Sox2_MA0143.3	5	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr15	63633441	63633442	chr15:63633442:C:T	rs7170198	C	T	T	Sox2_MA0143.3	15	0	+	0	0	.
chr15	63633518	63633519	chr15:63633519:A:G	rs62012831	A	G	a	Sox2_MA0143.3	3	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr15	63806749	63806750	chr15:63806750:T:C	rs114059611	T	C	T	Sox2_MA0143.3	16	0	+	0	0	.
chr15	63831091	63831092	chr15:63831092:T:C	rs77357604	T	C	T	Sox2_MA0143.3	3	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr15	63834288	63834289	chr15:63834289:G:A	rs61385516	G	A	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr15	63972840	63972841	chr15:63972841:G:A	rs4776697	G	A	A	Sox2_MA0143.3	9	0	-	0	0	.
chr15	63994021	63994022	chr15:63994022:G:A	rs28544905	G	A	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr15	63997936	63997937	chr15:63997937:T:C	rs7167478	T	C	T	Sox2_MA0143.3	24	0	-	0	0	.
chr15	64009933	64009934	chr15:64009934:A:G	rs62021502	A	G	A	Sox2_MA0143.3	12	0	-	0	0	.
chr15	64011095	64011096	chr15:64011096:G:A	rs74933518	G	A	G	Sox2_MA0143.3	0	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr15	64137443	64137444	chr15:64137444:G:A	rs72755099	G	A	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr15	64141958	64141959	chr15:64141959:A:G	rs7176549	A	G	G	Sox2_MA0143.3	-2	0	+	0	0	.
chr15	64147332	64147333	chr15:64147333:G:C	rs11635627	G	C	G	Sox2_MA0143.3	19	0	+	0	0	.
chr15	64412356	64412357	chr15:64412357:G:A	rs923318217	G	A	G	Sox2_MA0143.3	22	0	+	0	0	.
chr15	64527780	64527781	chr15:64527781:A:G	rs1562448	A	G	A	Sox2_MA0143.3	11	0	-	0	0	.
chr15	64527806	64527807	chr15:64527807:A:G	rs116199118	A	G	A	Sox2_MA0143.3	-15	0	-	0	0	.
chr15	64634821	64634822	chr15:64634822:A:G	rs1442396088	A	G	A	Sox2_MA0143.3	25	0	-	0	0	.
chr15	64634851	64634852	chr15:64634852:A:G	rs10519272	A	G	A	Sox2_MA0143.3	-5	0	-	0	0	.
chr15	64634971	64634972	chr15:64634972:C:T	rs10519273	C	T	C	Sox2_MA0143.3	1	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr15	64703323	64703324	chr15:64703324:C:A	chr15:64703324:C:A	C	A	C	Sox2_MA0143.3	11	0	-	0	0	.
chr15	64855511	64855512	chr15:64855512:A:C	rs832879	A	C	C	Sox2_MA0143.3	27	0	+	0	0	.
chr15	64863654	64863655	chr15:64863655:G:A	rs114843097	G	A	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr15	64883474	64883475	chr15:64883475:C:T	rs11633431	C	T	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr15	64883482	64883483	chr15:64883483:C:T	rs565657114	C	T	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr15	64893684	64893685	chr15:64893685:G:T	rs1684032	G	T	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr15	65062853	65062854	chr15:65062854:G:A	rs555521848	G	A	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr15	65086496	65086497	chr15:65086497:C:T	rs916573022	C	T	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr15	65312244	65312245	chr15:65312245:A:G	rs112901075	A	G	A	Sox2_MA0143.3	-13	0	+	0	0	.
chr15	65352171	65352172	chr15:65352172:T:A	rs590275	T	A	T	Sox2_MA0143.3	7	1	+	9.800647049772198	3.5547341015215945	CCTTTGTT
chr15	65410703	65410704	chr15:65410704:C:T	rs145142327	C	T	C	Sox2_MA0143.3	24	0	-	0	0	.
chr15	65516571	65516572	chr15:65516572:T:C	rs74718834	T	C	T	Sox2_MA0143.3	19	0	-	0	0	.
chr15	65530768	65530769	chr15:65530769:A:C	chr15:65530769:A:C	A	C	a	Sox2_MA0143.3	-20	0	+	0	0	.
chr15	65530799	65530800	chr15:65530800:G:T	rs1027713733	G	T	g	Sox2_MA0143.3	11	0	+	0	0	.
chr15	65731005	65731006	chr15:65731006:G:A	rs79387696	G	A	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr15	65781101	65781102	chr15:65781102:G:T	rs72741279	G	T	G	Sox2_MA0143.3	13	0	-	0	0	.
chr15	66090197	66090198	chr15:66090198:C:T	rs140878933	C	T	C	Sox2_MA0143.3	25	0	-	0	0	.
chr15	66100557	66100558	chr15:66100558:T:C	rs28406928	T	C	T	Sox2_MA0143.3	16	0	-	0	0	.
chr15	66138306	66138307	chr15:66138307:T:C	rs16949548	T	C	C	Sox2_MA0143.3	19	0	-	0	0	.
chr15	66151964	66151965	chr15:66151965:G:C	rs7163450	G	C	G	Sox2_MA0143.3	-16	0	-	0	0	.
chr15	66193277	66193278	chr15:66193278:C:A	rs4776286	C	A	A	Sox2_MA0143.3	1	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr15	66197199	66197200	chr15:66197200:T:C	rs4776759	T	C	C	Sox2_MA0143.3	3	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr15	66230019	66230020	chr15:66230020:G:A	rs12915138	G	A	G	Sox2_MA0143.3	26	0	-	0	0	.
chr15	66230045	66230046	chr15:66230046:G:A	rs33998102	G	A	G	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr15	66233916	66233917	chr15:66233917:C:T	rs7181304	C	T	C	Sox2_MA0143.3	11	0	+	0	0	.
chr15	66260309	66260310	chr15:66260310:T:C	rs11071877	T	C	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr15	66329007	66329008	chr15:66329008:A:G	rs17258507	A	G	A	Sox2_MA0143.3	-15	0	+	0	0	.
chr15	66402092	66402093	chr15:66402093:A:G	rs16949879	A	G	A	Sox2_MA0143.3	-8	0	+	0	0	.
chr15	66556599	66556600	chr15:66556600:C:T	rs12437980	C	T	C	Sox2_MA0143.3	12	0	-	0	0	.
chr15	66567165	66567166	chr15:66567166:C:T	rs180932023	C	T	C	Sox2_MA0143.3	21	0	+	0	0	.
chr15	66567167	66567168	chr15:66567168:G:T	rs186229824	G	T	G	Sox2_MA0143.3	23	0	+	0	0	.
chr15	66657661	66657662	chr15:66657662:C:T	rs115244680	C	T	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr15	66717737	66717738	chr15:66717738:A:G	rs12907408	A	G	A	Sox2_MA0143.3	14	0	-	0	0	.
chr15	66723321	66723322	chr15:66723322:A:G	rs16953584	A	G	A	Sox2_MA0143.3	-1	0	-	0	0	.
chr15	66746248	66746249	chr15:66746249:C:A	rs56728509	C	A	C	Sox2_MA0143.3	0	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr15	66751812	66751813	chr15:66751813:C:A	rs376525902	C	A	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr15	66751850	66751851	chr15:66751851:G:A	rs190340185	G	A	G	Sox2_MA0143.3	21	0	+	0	0	.
chr15	66792674	66792675	chr15:66792675:A:G	rs4300586	A	G	A	Sox2_MA0143.3	-5	0	+	0	0	.
chr15	66795764	66795765	chr15:66795765:C:T	rs76074179	C	T	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr15	66796351	66796352	chr15:66796352:C:T	rs4390544	C	T	T	Sox2_MA0143.3	22	0	-	0	0	.
chr15	66808294	66808295	chr15:66808295:T:G	rs35351616	T	G	G	Sox2_MA0143.3	-12	0	+	0	0	.
chr15	66821286	66821287	chr15:66821287:A:G	rs7495343	A	G	G	Sox2_MA0143.3	3	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr15	66859527	66859528	chr15:66859528:G:A	rs7495340	G	A	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr15	66888260	66888261	chr15:66888261:G:A	rs2447300	G	A	G	Sox2_MA0143.3	18	0	-	0	0	.
chr15	66911260	66911261	chr15:66911261:G:T	rs149491399	G	T	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr15	67005779	67005780	chr15:67005780:A:G	rs8023844	A	G	A	Sox2_MA0143.3	8	0	-	0	0	.
chr15	67009606	67009607	chr15:67009607:C:G	rs418492	C	G	C	Sox2_MA0143.3	15	0	-	0	0	.
chr15	67039044	67039045	chr15:67039045:C:A	rs8023420	C	A	T	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr15	67074184	67074185	chr15:67074185:G:A	rs545657671	G	A	G	Sox2_MA0143.3	17	0	-	0	0	.
chr15	67089001	67089002	chr15:67089002:C:T	rs4776884	C	T	C	Sox2_MA0143.3	23	0	+	0	0	.
chr15	67089002	67089003	chr15:67089003:A:G	rs4776885	A	G	A	Sox2_MA0143.3	24	0	+	0	0	.
chr15	67091920	67091921	chr15:67091921:C:T	rs4776888	C	T	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr15	67142009	67142010	chr15:67142010:A:C	rs12915039	A	C	A	Sox2_MA0143.3	23	0	-	0	0	.
chr15	67162114	67162115	chr15:67162115:G:T	rs576959898	G	T	G	Sox2_MA0143.3	9	0	+	0	0	.
chr15	67174680	67174681	chr15:67174681:G:C	rs537056315	G	C	G	Sox2_MA0143.3	26	0	+	0	0	.
chr15	67176779	67176780	chr15:67176780:G:A	rs3784679	G	A	G	Sox2_MA0143.3	21	0	-	0	0	.
chr15	67176789	67176790	chr15:67176790:G:T	rs3784680	G	T	G	Sox2_MA0143.3	11	0	-	0	0	.
chr15	67200117	67200118	chr15:67200118:A:G	rs146970923	A	G	A	Sox2_MA0143.3	27	0	+	0	0	.
chr15	67240534	67240535	chr15:67240535:T:C	rs150656760	T	C	T	Sox2_MA0143.3	27	0	-	0	0	.
chr15	67335882	67335883	chr15:67335883:T:G	rs72745452	T	G	T	Sox2_MA0143.3	-4	0	+	0	0	.
chr15	67477967	67477968	chr15:67477968:A:C	rs8026627	A	C	A	Sox2_MA0143.3	22	0	+	0	0	.
chr15	67502247	67502248	chr15:67502248:C:A	rs74445400	C	A	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr15	67521730	67521731	chr15:67521731:C:T	rs1383259415	C	T	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr15	67521753	67521754	chr15:67521754:C:T	rs528864905	C	T	C	Sox2_MA0143.3	15	0	+	0	0	.
chr15	67558762	67558763	chr15:67558763:C:G	rs34819968	C	G	C	Sox2_MA0143.3	25	0	+	0	0	.
chr15	67691731	67691732	chr15:67691732:G:A	rs138926989	G	A	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr15	67736022	67736023	chr15:67736023:G:A	rs9888652	G	A	A	Sox2_MA0143.3	-18	0	+	0	0	.
chr15	67777521	67777522	chr15:67777522:A:G	rs75283379	A	G	A	Sox2_MA0143.3	14	0	+	0	0	.
chr15	67802783	67802784	chr15:67802784:G:A	rs1026733	G	A	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr15	67821167	67821168	chr15:67821168:C:T	rs77990599	C	T	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr15	67821168	67821169	chr15:67821169:C:A	rs558923257	C	A	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr15	67835778	67835779	chr15:67835779:C:G	rs12898654	C	G	G	Sox2_MA0143.3	26	0	-	0	0	.
chr15	67878777	67878778	chr15:67878778:T:C	rs338361	T	C	C	Sox2_MA0143.3	11	0	-	0	0	.
chr15	67923153	67923154	chr15:67923154:A:G	rs10152788	A	G	A	Sox2_MA0143.3	-10	0	+	0	0	.
chr15	67984512	67984513	chr15:67984513:C:A	rs7402193	C	A	C	Sox2_MA0143.3	0	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr15	68052508	68052509	chr15:68052509:A:G	rs80131134	A	G	A	Sox2_MA0143.3	6	1	-	9.019595766176417	2.110840986861197	CCATTGTC
chr15	68157412	68157413	chr15:68157413:G:T	rs12905763	G	T	T	Sox2_MA0143.3	15	0	+	0	0	.
chr15	68214933	68214934	chr15:68214934:G:A	rs10431808	G	A	A	Sox2_MA0143.3	14	0	-	0	0	.
chr15	68214956	68214957	chr15:68214957:A:G	rs8042358	A	G	A	Sox2_MA0143.3	-9	0	-	0	0	.
chr15	68224872	68224873	chr15:68224873:A:G	rs8040883	A	G	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr15	68256713	68256714	chr15:68256714:C:T	rs1369791586	C	T	C	Sox2_MA0143.3	25	0	-	0	0	.
chr15	68315963	68315964	chr15:68315964:C:T	rs74667645	C	T	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr15	68338678	68338679	chr15:68338679:T:C	rs7179545	T	C	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr15	68382089	68382090	chr15:68382090:C:T	rs73431891	C	T	T	Sox2_MA0143.3	-13	0	+	0	0	.
chr15	68386489	68386490	chr15:68386490:G:A	rs74898005	G	A	G	Sox2_MA0143.3	7	1	+	8.864090315184848	3.5547341015215945	CCTTTGTG
chr15	68417989	68417990	chr15:68417990:A:G	rs4299097	A	G	A	Sox2_MA0143.3	3	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr15	68419130	68419131	chr15:68419131:G:T	rs8024010	G	T	T	Sox2_MA0143.3	-15	0	+	0	0	.
chr15	68421694	68421695	chr15:68421695:C:T	rs4402499	C	T	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr15	68487806	68487807	chr15:68487807:T:A	rs734635	T	A	A	Sox2_MA0143.3	-16	0	+	0	0	.
chr15	68509026	68509027	chr15:68509027:T:G	rs150920181	T	G	T	Sox2_MA0143.3	8	0	+	0	0	.
chr15	68553029	68553030	chr15:68553030:G:A	rs144617292	G	A	G	Sox2_MA0143.3	19	0	-	0	0	.
chr15	68554249	68554250	chr15:68554250:A:G	rs6494754	A	G	G	Sox2_MA0143.3	-14	0	+	0	0	.
chr15	68588821	68588822	chr15:68588822:A:G	rs34481026	A	G	A	Sox2_MA0143.3	-2	0	-	0	0	.
chr15	68616562	68616563	chr15:68616563:G:T	rs74020256	G	T	G	Sox2_MA0143.3	-5	0	+	0	0	.
chr15	68640737	68640738	chr15:68640738:C:T	rs8023980	C	T	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr15	68747227	68747228	chr15:68747228:G:A	rs12913909	G	A	g	Sox2_MA0143.3	12	0	+	0	0	.
chr15	68803157	68803158	chr15:68803158:C:T	rs2958403	C	T	T	Sox2_MA0143.3	-14	0	+	0	0	.
chr15	69094858	69094859	chr15:69094859:C:T	rs11072066	C	T	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr15	69105685	69105686	chr15:69105686:G:A	rs1392635	G	A	G	Sox2_MA0143.3	1	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr15	69142636	69142637	chr15:69142637:C:A	rs76062497	C	A	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr15	69150735	69150736	chr15:69150736:C:T	rs7173098	C	T	T	Sox2_MA0143.3	-19	0	+	0	0	.
chr15	69272003	69272004	chr15:69272004:C:T	rs6545	C	T	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr15	69352574	69352575	chr15:69352575:C:T	rs2102266	C	T	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr15	69383629	69383630	chr15:69383630:G:C	rs111946757	G	C	-	Sox2_MA0143.3	25	0	+	0	0	.
chr15	69488073	69488074	chr15:69488074:T:C	rs12440154	T	C	T	Sox2_MA0143.3	21	0	-	0	0	.
chr15	69500058	69500059	chr15:69500059:C:T	rs759085843	C	T	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr15	69607647	69607648	chr15:69607648:G:A	rs7497413	G	A	g	Sox2_MA0143.3	12	0	+	0	0	.
chr15	69663459	69663460	chr15:69663460:C:T	rs9920305	C	T	T	Sox2_MA0143.3	27	0	+	0	0	.
chr15	69665633	69665634	chr15:69665634:C:T	rs1341323525	C	T	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr15	69665648	69665649	chr15:69665649:G:A	rs114248662	G	A	G	Sox2_MA0143.3	-2	0	+	0	0	.
chr15	69810351	69810352	chr15:69810352:C:T	rs16953777	C	T	C	Sox2_MA0143.3	20	0	-	0	0	.
chr15	69853929	69853930	chr15:69853930:C:T	rs570600174	C	T	C	Sox2_MA0143.3	1	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr15	69994871	69994872	chr15:69994872:A:G	rs56284408	A	G	A	Sox2_MA0143.3	3	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr15	70028845	70028846	chr15:70028846:G:A	rs4777222	G	A	G	Sox2_MA0143.3	19	0	+	0	0	.
chr15	70069061	70069062	chr15:70069062:C:T	rs78233088	C	T	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr15	70090483	70090484	chr15:70090484:C:T	rs182735398	C	T	C	Sox2_MA0143.3	9	0	+	0	0	.
chr15	70181227	70181228	chr15:70181228:C:T	rs117536849	C	T	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr15	70181677	70181678	chr15:70181678:T:G	rs7181003	T	G	T	Sox2_MA0143.3	-1	0	+	0	0	.
chr15	70185776	70185777	chr15:70185777:C:T	rs12437565	C	T	T	Sox2_MA0143.3	23	0	-	0	0	.
chr15	70215678	70215679	chr15:70215679:C:T	rs7182363	C	T	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr15	70231703	70231704	chr15:70231704:G:A	rs2415083	G	A	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr15	70255717	70255718	chr15:70255718:G:A	chr15:70255718:G:A	G	A	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr15	70286442	70286443	chr15:70286443:A:G	rs9744287	A	G	G	Sox2_MA0143.3	4	1	-	9.800647049772198	2.8918922704569785	CCTTTGTT
chr15	70308429	70308430	chr15:70308430:T:C	rs73433362	T	C	C	Sox2_MA0143.3	3	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr15	70308434	70308435	chr15:70308435:A:T	rs112300270	A	T	A	Sox2_MA0143.3	8	0	+	0	0	.
chr15	70308444	70308445	chr15:70308445:G:A	chr15:70308445:G:A	G	A	G	Sox2_MA0143.3	18	0	+	0	0	.
chr15	70321035	70321036	chr15:70321036:C:G	rs7171430	C	G	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr15	70322126	70322127	chr15:70322127:A:G	rs116889522	A	G	A	Sox2_MA0143.3	22	0	+	0	0	.
chr15	70362825	70362826	chr15:70362826:A:G	rs35974209	A	G	G	Sox2_MA0143.3	2	1	-	8.864090315184848	2.5582713367092715	CCTTTGTG
chr15	70367895	70367896	chr15:70367896:C:A	rs12591775	C	A	C	Sox2_MA0143.3	14	0	-	0	0	.
chr15	70373314	70373315	chr15:70373315:T:C	rs4544203	T	C	T	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr15	70416716	70416717	chr15:70416717:C:G	rs12437801	C	G	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr15	70424047	70424048	chr15:70424048:C:T	rs117073438	C	T	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr15	70440610	70440611	chr15:70440611:T:G	chr15:70440611:T:G	T	G	T	Sox2_MA0143.3	-5	0	+	0	0	.
chr15	70440614	70440615	chr15:70440615:G:A	rs7174946	G	A	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr15	70496781	70496782	chr15:70496782:G:A	rs12441701	G	A	A	Sox2_MA0143.3	-20	0	+	0	0	.
chr15	70509016	70509017	chr15:70509017:G:A	rs190410324	G	A	G	Sox2_MA0143.3	1	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr15	70534197	70534198	chr15:70534198:T:G	rs7175565	T	G	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr15	70603086	70603087	chr15:70603087:C:A	rs74023342	C	A	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr15	70610478	70610479	chr15:70610479:T:C	rs114365334	T	C	T	Sox2_MA0143.3	20	0	-	0	0	.
chr15	70614184	70614185	chr15:70614185:C:T	rs146108624	C	T	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr15	70633177	70633178	chr15:70633178:A:C	rs62016882	A	C	A	Sox2_MA0143.3	21	0	-	0	0	.
chr15	70644008	70644009	chr15:70644009:G:A	chr15:70644009:G:A	G	A	G	Sox2_MA0143.3	14	0	+	0	0	.
chr15	70902322	70902323	chr15:70902323:G:A	rs1313572807	G	A	G	Sox2_MA0143.3	12	0	+	0	0	.
chr15	71213237	71213238	chr15:71213238:G:T	rs74751475	G	T	G	Sox2_MA0143.3	-9	0	+	0	0	.
chr15	71218957	71218958	chr15:71218958:A:G	rs76358560	A	G	A	Sox2_MA0143.3	-13	0	-	0	0	.
chr15	71239183	71239184	chr15:71239184:G:A	rs12912547	G	A	G	Sox2_MA0143.3	1	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr15	71239195	71239196	chr15:71239196:G:A	rs2063827	G	A	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr15	71248659	71248660	chr15:71248660:G:C	rs72759647	G	C	G	Sox2_MA0143.3	13	0	-	0	0	.
chr15	71272908	71272909	chr15:71272909:A:G	rs28883571	A	G	A	Sox2_MA0143.3	-17	0	+	0	0	.
chr15	71272919	71272920	chr15:71272920:G:A	rs2415113	G	A	A	Sox2_MA0143.3	-6	0	+	0	0	.
chr15	71311910	71311911	chr15:71311911:G:A	rs10851838	G	A	G	Sox2_MA0143.3	20	0	+	0	0	.
chr15	71387740	71387741	chr15:71387741:G:T	rs8033889	G	T	T	Sox2_MA0143.3	-9	0	-	0	0	.
chr15	71411889	71411890	chr15:71411890:T:G	rs1038921156	T	G	T	Sox2_MA0143.3	9	0	+	0	0	.
chr15	71433675	71433676	chr15:71433676:G:T	rs62017913	G	T	G	Sox2_MA0143.3	13	0	-	0	0	.
chr15	71455004	71455005	chr15:71455005:T:C	rs76843732	T	C	T	Sox2_MA0143.3	-16	0	+	0	0	.
chr15	71541466	71541467	chr15:71541467:T:C	rs55829501	T	C	T	Sox2_MA0143.3	4	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr15	71549288	71549289	chr15:71549289:G:A	rs58280030	G	A	A	Sox2_MA0143.3	25	0	+	0	0	.
chr15	71552178	71552179	chr15:71552179:G:A	rs62022765	G	A	A	Sox2_MA0143.3	20	0	+	0	0	.
chr15	71610496	71610497	chr15:71610497:A:G	rs4777417	A	G	G	Sox2_MA0143.3	6	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr15	71629918	71629919	chr15:71629919:G:A	rs750126324	G	A	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr15	71653311	71653312	chr15:71653312:G:C	rs1875413	G	C	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr15	71679739	71679740	chr15:71679740:C:T	rs7172239	C	T	C	Sox2_MA0143.3	25	0	+	0	0	.
chr15	71716187	71716188	chr15:71716188:A:T	rs8037397	A	T	A	Sox2_MA0143.3	13	0	+	0	0	.
chr15	71780217	71780218	chr15:71780218:C:T	rs1054260	C	T	C	Sox2_MA0143.3	19	0	+	0	0	.
chr15	71780849	71780850	chr15:71780850:G:A	rs17811309	G	A	G	Sox2_MA0143.3	0	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr15	71971710	71971711	chr15:71971711:A:G	rs11858354	A	G	A	Sox2_MA0143.3	23	0	+	0	0	.
chr15	72200072	72200073	chr15:72200073:C:T	rs1048591236	C	T	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr15	72229160	72229161	chr15:72229161:G:A	rs8192355	G	A	G	Sox2_MA0143.3	1	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr15	72229161	72229162	chr15:72229162:G:A	rs8192354	G	A	A	Sox2_MA0143.3	0	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr15	72474341	72474342	chr15:72474342:A:G	rs187106179	A	G	A	Sox2_MA0143.3	25	0	+	0	0	.
chr15	72736726	72736727	chr15:72736727:G:C	rs117852179	G	C	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr15	72865627	72865628	chr15:72865628:C:G	rs141981033	C	G	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr15	72866213	72866214	chr15:72866214:G:A	rs4777564	G	A	A	Sox2_MA0143.3	27	0	+	0	0	.
chr15	73232031	73232032	chr15:73232032:G:A	rs1714532	G	A	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr15	73252944	73252945	chr15:73252945:A:C	rs35450875	A	C	a	Sox2_MA0143.3	-3	0	+	0	0	.
chr15	73327655	73327656	chr15:73327656:T:C	rs494493	T	C	C	Sox2_MA0143.3	11	0	+	0	0	.
chr15	73334861	73334862	chr15:73334862:T:C	rs542259	T	C	C	Sox2_MA0143.3	14	0	+	0	0	.
chr15	73763981	73763982	chr15:73763982:G:A	rs7171779	G	A	G	Sox2_MA0143.3	7	1	-	9.019595766176417	9.613475778572903	CCATTGTC
chr15	73800574	73800575	chr15:73800575:C:G	rs4886622	C	G	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr15	73800586	73800587	chr15:73800587:C:T	rs4886623	C	T	T	Sox2_MA0143.3	-13	0	-	0	0	.
chr15	73833897	73833898	chr15:73833898:G:A	rs12904100	G	A	G	Sox2_MA0143.3	9	0	-	0	0	.
chr15	73849663	73849664	chr15:73849664:T:C	rs71399764	T	C	T	Sox2_MA0143.3	19	0	+	0	0	.
chr15	73858593	73858594	chr15:73858594:C:T	rs78920162	C	T	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr15	73867128	73867129	chr15:73867129:A:G	rs1377064	A	G	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr15	73896584	73896585	chr15:73896585:T:G	rs67962220	T	G	T	Sox2_MA0143.3	13	0	-	0	0	.
chr15	73910500	73910501	chr15:73910501:A:C	rs8035434	A	C	C	Sox2_MA0143.3	18	0	-	0	0	.
chr15	73939236	73939237	chr15:73939237:G:A	chr15:73939237:G:A	G	A	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr15	74040865	74040866	chr15:74040866:A:G	chr15:74040866:A:G	A	G	A	Sox2_MA0143.3	15	0	-	0	0	.
chr15	74040894	74040895	chr15:74040895:C:T	rs137986145	C	T	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr15	74214137	74214138	chr15:74214138:C:T	rs62003661	C	T	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr15	74216019	74216020	chr15:74216020:G:A	rs187278621	G	A	G	Sox2_MA0143.3	26	0	-	0	0	.
chr15	74224085	74224086	chr15:74224086:G:A	rs748608	G	A	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr15	74301283	74301284	chr15:74301284:C:G	chr15:74301284:C:G	C	G	C	Sox2_MA0143.3	18	0	-	0	0	.
chr15	74348305	74348306	chr15:74348306:G:C	rs6495096	G	C	C	Sox2_MA0143.3	25	0	+	0	0	.
chr15	74384456	74384457	chr15:74384457:C:A	rs116662488	C	A	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr15	74401549	74401550	chr15:74401550:T:C	rs77114142	T	C	T	Sox2_MA0143.3	4	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr15	74453436	74453437	chr15:74453437:G:C	rs7169985	G	C	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr15	74605489	74605490	chr15:74605490:C:T	rs562145065	C	T	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr15	74740105	74740106	chr15:74740106:C:T	rs11632706	C	T	T	Sox2_MA0143.3	-16	0	-	0	0	.
chr15	74760478	74760479	chr15:74760479:G:A	rs11072502	G	A	A	Sox2_MA0143.3	-18	0	-	0	0	.
chr15	74762524	74762525	chr15:74762525:G:C	rs11072507	G	C	G	Sox2_MA0143.3	8	0	-	0	0	.
chr15	74762550	74762551	chr15:74762551:G:T	chr15:74762551:G:T	G	T	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr15	74773302	74773303	chr15:74773303:G:C	rs4886410	G	C	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr15	74827869	74827870	chr15:74827870:C:G	rs3935077	C	G	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr15	74837252	74837253	chr15:74837253:G:A	rs2290573	G	A	G	Sox2_MA0143.3	15	0	-	0	0	.
chr15	74840139	74840140	chr15:74840140:T:C	rs72730515	T	C	T	Sox2_MA0143.3	-15	0	-	0	0	.
chr15	74985828	74985829	chr15:74985829:T:C	rs7172565	T	C	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr15	75036113	75036114	chr15:75036114:A:C	rs541512206	A	C	A	Sox2_MA0143.3	-4	0	-	0	0	.
chr15	75164760	75164761	chr15:75164761:C:T	rs11630707	C	T	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr15	75360579	75360580	chr15:75360580:G:A	rs368664368	G	A	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr15	75436189	75436190	chr15:75436190:C:G	rs4486847	C	G	G	Sox2_MA0143.3	9	0	-	0	0	.
chr15	75523416	75523417	chr15:75523417:T:C	rs11636031	T	C	C	Sox2_MA0143.3	6	1	+	9.206767037375712	2.298012258060492	CCTTTGTC
chr15	75639787	75639788	chr15:75639788:G:T	rs13737	G	T	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr15	75672772	75672773	chr15:75672773:A:G	rs192369507	A	G	A	Sox2_MA0143.3	-19	0	-	0	0	.
chr15	75677728	75677729	chr15:75677729:C:T	rs8023621	C	T	C	Sox2_MA0143.3	27	0	+	0	0	.
chr15	75687440	75687441	chr15:75687441:G:T	rs8030131	G	T	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr15	75831713	75831714	chr15:75831714:C:T	rs75207658	C	T	C	Sox2_MA0143.3	0	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr15	75843899	75843900	chr15:75843900:C:T	chr15:75843900:C:T	C	T	.	Sox2_MA0143.3	20	0	-	0	0	.
chr15	75843909	75843910	chr15:75843910:C:T	rs934963121	C	T	.	Sox2_MA0143.3	10	0	-	0	0	.
chr15	75863251	75863252	chr15:75863252:C:T	rs78890153	C	T	C	Sox2_MA0143.3	15	0	+	0	0	.
chr15	75922626	75922627	chr15:75922627:G:C	rs1347083392	G	C	G	Sox2_MA0143.3	-16	0	-	0	0	.
chr15	75927819	75927820	chr15:75927820:T:C	rs17427842	T	C	T	Sox2_MA0143.3	4	1	+	9.800647049772198	2.8918922704569785	CCTTTGTT
chr15	76155561	76155562	chr15:76155562:G:A	rs1018098	G	A	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr15	76253679	76253680	chr15:76253680:C:T	rs2247488	C	T	T	Sox2_MA0143.3	-4	0	-	0	0	.
chr15	76398264	76398265	chr15:76398265:G:A	rs12907805	G	A	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr15	76443749	76443750	chr15:76443750:T:G	rs206205	T	G	T	Sox2_MA0143.3	19	0	+	0	0	.
chr15	76578349	76578350	chr15:76578350:T:C	rs537467827	T	C	T	Sox2_MA0143.3	13	0	-	0	0	.
chr15	76617391	76617392	chr15:76617392:C:T	rs79334510	C	T	C	Sox2_MA0143.3	7	1	+	9.206767037375712	9.800647049772198	CCTTTGTC
chr15	76649019	76649020	chr15:76649020:C:T	rs12914196	C	T	C	Sox2_MA0143.3	18	0	+	0	0	.
chr15	76932078	76932079	chr15:76932079:C:A	rs533780439	C	A	c	Sox2_MA0143.3	-18	0	-	0	0	.
chr15	76973643	76973644	chr15:76973644:G:A	rs141082432	G	A	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr15	77027689	77027690	chr15:77027690:C:A	rs553472557	C	A	C	Sox2_MA0143.3	13	0	+	0	0	.
chr15	77034224	77034225	chr15:77034225:A:G	rs113262942	A	G	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr15	77180528	77180529	chr15:77180529:G:A	rs10519162	G	A	A	Sox2_MA0143.3	-10	0	-	0	0	.
chr15	77201532	77201533	chr15:77201533:T:C	rs12914128	T	C	t	Sox2_MA0143.3	-9	0	+	0	0	.
chr15	77415973	77415974	chr15:77415974:A:C	rs16968829	A	C	A	Sox2_MA0143.3	14	0	+	0	0	.
chr15	77482711	77482712	chr15:77482712:A:G	rs188908756	A	G	A	Sox2_MA0143.3	-5	0	+	0	0	.
chr15	77482715	77482716	chr15:77482716:C:T	rs758078531	C	T	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr15	77496478	77496479	chr15:77496479:A:G	rs34918566	A	G	G	Sox2_MA0143.3	15	0	+	0	0	.
chr15	77514784	77514785	chr15:77514785:C:T	rs12911649	C	T	T	Sox2_MA0143.3	-20	0	-	0	0	.
chr15	77623762	77623763	chr15:77623763:T:C	rs16969013	T	C	C	Sox2_MA0143.3	7	1	+	9.800647049772198	9.206767037375712	CCTTTGTT
chr15	77624004	77624005	chr15:77624005:T:C	rs61079432	T	C	T	Sox2_MA0143.3	2	1	+	8.864090315184848	2.5582713367092715	CCTTTGTG
chr15	77822278	77822279	chr15:77822279:G:A	rs76629929	G	A	G	Sox2_MA0143.3	11	0	+	0	0	.
chr15	77832270	77832271	chr15:77832271:A:G	rs75220273	A	G	A	Sox2_MA0143.3	-17	0	+	0	0	.
chr15	77832580	77832581	chr15:77832581:G:A	rs4886928	G	A	A	Sox2_MA0143.3	23	0	-	0	0	.
chr15	77863205	77863206	chr15:77863206:A:G	rs7165969	A	G	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr15	77942363	77942364	chr15:77942364:T:C	rs112653919	T	C	t	Sox2_MA0143.3	2	1	-	9.019595766176417	2.900948058900136	CCATTGTC
chr15	77986421	77986422	chr15:77986422:C:T	rs60497311	C	T	-	Sox2_MA0143.3	-12	0	+	0	0	.
chr15	77986444	77986445	chr15:77986445:T:C	rs113573506	T	C	-	Sox2_MA0143.3	11	0	+	0	0	.
chr15	78035606	78035607	chr15:78035607:T:C	rs561333397	T	C	T	Sox2_MA0143.3	-20	0	-	0	0	.
chr15	78086362	78086363	chr15:78086363:A:T	rs4887008	A	T	T	Sox2_MA0143.3	11	0	+	0	0	.
chr15	78146675	78146676	chr15:78146676:T:C	rs12903696	T	C	T	Sox2_MA0143.3	6	1	+	8.676919043985553	1.7681642646703326	CCATTGTG
chr15	78157088	78157089	chr15:78157089:A:G	rs62009337	A	G	.	Sox2_MA0143.3	26	0	-	0	0	.
chr15	78172858	78172859	chr15:78172859:G:A	rs116941007	G	A	G	Sox2_MA0143.3	-14	0	+	0	0	.
chr15	78202013	78202014	chr15:78202014:G:A	rs2139442	G	A	G	Sox2_MA0143.3	18	0	-	0	0	.
chr15	78225704	78225705	chr15:78225705:T:C	rs4887018	T	C	T	Sox2_MA0143.3	13	0	-	0	0	.
chr15	78239190	78239191	chr15:78239191:T:C	rs1969341	T	C	C	Sox2_MA0143.3	27	0	-	0	0	.
chr15	78242204	78242205	chr15:78242205:G:A	rs1010388	G	A	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr15	78242205	78242206	chr15:78242206:G:A	rs116133438	G	A	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr15	78260689	78260690	chr15:78260690:A:G	rs12900109	A	G	A	Sox2_MA0143.3	19	0	-	0	0	.
chr15	78264465	78264466	chr15:78264466:T:A	chr15:78264466:T:A	T	A	T	Sox2_MA0143.3	-17	0	+	0	0	.
chr15	78312824	78312825	chr15:78312825:C:T	rs75248695	C	T	C	Sox2_MA0143.3	9	0	+	0	0	.
chr15	78541487	78541488	chr15:78541488:C:G	rs4243083	C	G	G	Sox2_MA0143.3	-5	0	+	0	0	.
chr15	78695343	78695344	chr15:78695344:T:C	rs62010552	T	C	T	Sox2_MA0143.3	18	0	+	0	0	.
chr15	78713236	78713237	chr15:78713237:G:A	rs11634628	G	A	A	Sox2_MA0143.3	26	0	+	0	0	.
chr15	78764957	78764958	chr15:78764958:T:C	rs140280485	T	C	T	Sox2_MA0143.3	-19	0	-	0	0	.
chr15	78851136	78851137	chr15:78851137:A:G	rs4461041	A	G	a	Sox2_MA0143.3	10	0	-	0	0	.
chr15	78864640	78864641	chr15:78864641:T:C	rs62011052	T	C	T	Sox2_MA0143.3	19	0	-	0	0	.
chr15	79060349	79060350	chr15:79060350:A:G	rs11634225	A	G	A	Sox2_MA0143.3	-6	0	+	0	0	.
chr15	79148554	79148555	chr15:79148555:C:T	rs35382567	C	T	C	Sox2_MA0143.3	18	0	+	0	0	.
chr15	79210026	79210027	chr15:79210027:G:C	rs28494584	G	C	g	Sox2_MA0143.3	-5	0	+	0	0	.
chr15	79296367	79296368	chr15:79296368:C:T	rs59734296	C	T	C	Sox2_MA0143.3	8	0	+	0	0	.
chr15	79364180	79364181	chr15:79364181:T:G	rs62025981	T	G	T	Sox2_MA0143.3	-10	0	-	0	0	.
chr15	79370891	79370892	chr15:79370892:T:C	rs28430783	T	C	T	Sox2_MA0143.3	9	0	+	0	0	.
chr15	79372535	79372536	chr15:79372536:C:T	rs28562205	C	T	C	Sox2_MA0143.3	22	0	-	0	0	.
chr15	79419047	79419048	chr15:79419048:A:G	rs769765	A	G	A	Sox2_MA0143.3	-17	0	-	0	0	.
chr15	79465331	79465332	chr15:79465332:C:T	rs17265800	C	T	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr15	79572865	79572866	chr15:79572866:C:T	rs1337559	C	T	T	Sox2_MA0143.3	12	0	+	0	0	.
chr15	79635201	79635202	chr15:79635202:C:T	rs7176681	C	T	T	Sox2_MA0143.3	-2	0	+	0	0	.
chr15	79902137	79902138	chr15:79902138:T:C	rs2163005	T	C	T	Sox2_MA0143.3	22	0	+	0	0	.
chr15	79915998	79915999	chr15:79915999:G:A	rs11631272	G	A	A	Sox2_MA0143.3	11	0	-	0	0	.
chr15	79920483	79920484	chr15:79920484:T:C	rs1055947	T	C	T	Sox2_MA0143.3	12	0	-	0	0	.
chr15	80026056	80026057	chr15:80026057:A:T	rs7165414	A	T	A	Sox2_MA0143.3	-7	0	+	0	0	.
chr15	80042341	80042342	chr15:80042342:A:G	rs67879751	A	G	A	Sox2_MA0143.3	7	1	-	9.613475778572903	9.019595766176417	CCATTGTT
chr15	80201913	80201914	chr15:80201914:G:A	rs11637194	G	A	G	Sox2_MA0143.3	11	0	+	0	0	.
chr15	80231952	80231953	chr15:80231953:G:A	rs75034781	G	A	G	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr15	80233697	80233698	chr15:80233698:C:T	rs4778769	C	T	C	Sox2_MA0143.3	24	0	-	0	0	.
chr15	80239749	80239750	chr15:80239750:T:C	rs11072888	T	C	C	Sox2_MA0143.3	4	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr15	80280943	80280944	chr15:80280944:G:A	rs112655555	G	A	G	Sox2_MA0143.3	15	0	+	0	0	.
chr15	80290095	80290096	chr15:80290096:A:T	rs12908997	A	T	A	Sox2_MA0143.3	-17	0	+	0	0	.
chr15	80317864	80317865	chr15:80317865:G:A	rs63090460	G	A	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr15	80404426	80404427	chr15:80404427:G:T	rs186548199	G	T	G	Sox2_MA0143.3	27	0	+	0	0	.
chr15	80455212	80455213	chr15:80455213:A:G	rs16972151	A	G	A	Sox2_MA0143.3	22	0	+	0	0	.
chr15	80455545	80455546	chr15:80455546:C:T	rs116814485	C	T	C	Sox2_MA0143.3	9	0	-	0	0	.
chr15	80507814	80507815	chr15:80507815:A:G	rs11072921	A	G	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr15	80562295	80562296	chr15:80562296:A:G	rs35525613	A	G	A	Sox2_MA0143.3	11	0	-	0	0	.
chr15	80599411	80599412	chr15:80599412:G:A	rs6495512	G	A	A	Sox2_MA0143.3	-20	0	-	0	0	.
chr15	80627102	80627103	chr15:80627103:A:C	rs28735057	A	C	A	Sox2_MA0143.3	20	0	+	0	0	.
chr15	80638449	80638450	chr15:80638450:A:C	rs55716724	A	C	A	Sox2_MA0143.3	25	0	-	0	0	.
chr15	80699105	80699106	chr15:80699106:T:C	rs34994596	T	C	T	Sox2_MA0143.3	3	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr15	80925800	80925801	chr15:80925801:C:T	rs372889829	C	T	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr15	80954367	80954368	chr15:80954368:G:A	rs114999316	G	A	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr15	80959686	80959687	chr15:80959687:A:G	rs60065485	A	G	A	Sox2_MA0143.3	-10	0	+	0	0	.
chr15	80966408	80966409	chr15:80966409:A:G	rs74787527	A	G	A	Sox2_MA0143.3	2	1	-	3.5547341015215945	-2.751084876953981	CCTTTGTA
chr15	80971295	80971296	chr15:80971296:C:T	rs7178551	C	T	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr15	80985440	80985441	chr15:80985441:T:C	rs1265783855	T	C	T	Sox2_MA0143.3	18	0	-	0	0	.
chr15	81000420	81000421	chr15:81000421:G:A	rs56246246	G	A	G	Sox2_MA0143.3	23	0	-	0	0	.
chr15	81000463	81000464	chr15:81000464:C:A	rs548999525	C	A	C	Sox2_MA0143.3	-20	0	-	0	0	.
chr15	81075208	81075209	chr15:81075209:G:C	rs11072981	G	C	G	Sox2_MA0143.3	20	0	-	0	0	.
chr15	81093210	81093211	chr15:81093211:T:G	rs2683260	T	G	G	Sox2_MA0143.3	24	0	-	0	0	.
chr15	81097578	81097579	chr15:81097579:A:G	rs76651690	A	G	A	Sox2_MA0143.3	-9	0	+	0	0	.
chr15	81113582	81113583	chr15:81113583:G:A	rs75964790	G	A	G	Sox2_MA0143.3	21	0	-	0	0	.
chr15	81156035	81156036	chr15:81156036:T:C	rs59892671	T	C	T	Sox2_MA0143.3	20	0	-	0	0	.
chr15	81169569	81169570	chr15:81169570:A:G	rs80013245	A	G	G	Sox2_MA0143.3	9	0	-	0	0	.
chr15	81253347	81253348	chr15:81253348:A:G	rs61683069	A	G	A	Sox2_MA0143.3	-2	0	+	0	0	.
chr15	81265295	81265296	chr15:81265296:T:G	chr15:81265296:T:G	T	G	T	Sox2_MA0143.3	21	0	+	0	0	.
chr15	81272536	81272537	chr15:81272537:G:A	rs11633218	G	A	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr15	81275540	81275541	chr15:81275541:T:G	rs66500340	T	G	T	Sox2_MA0143.3	9	0	-	0	0	.
chr15	81282046	81282047	chr15:81282047:A:C	rs8040740	A	C	A	Sox2_MA0143.3	-5	0	+	0	0	.
chr15	81298923	81298924	chr15:81298924:C:T	rs11857713	C	T	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr15	81304058	81304059	chr15:81304059:C:T	rs11634770	C	T	C	Sox2_MA0143.3	24	0	+	0	0	.
chr15	81356659	81356660	chr15:81356660:T:C	rs7167034	T	C	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr15	81410511	81410512	chr15:81410512:C:G	rs12101997	C	G	C	Sox2_MA0143.3	0	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr15	81412349	81412350	chr15:81412350:T:C	rs148807148	T	C	T	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr15	81437275	81437276	chr15:81437276:C:T	rs145389947	C	T	C	Sox2_MA0143.3	21	0	+	0	0	.
chr15	81707057	81707058	chr15:81707058:C:A	rs140273975	C	A	c	Sox2_MA0143.3	-20	0	+	0	0	.
chr15	81782018	81782019	chr15:81782019:G:A	rs11636416	G	A	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr15	81794978	81794979	chr15:81794979:C:T	rs4277310	C	T	T	Sox2_MA0143.3	15	0	-	0	0	.
chr15	81983632	81983633	chr15:81983633:G:A	rs7177796	G	A	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr15	82045745	82045746	chr15:82045746:C:G	rs775331068	C	G	C	Sox2_MA0143.3	27	0	-	0	0	.
chr15	82047422	82047423	chr15:82047423:C:T	rs186291544	C	T	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr15	82102976	82102977	chr15:82102977:A:G	chr15:82102977:A:G	A	G	A	Sox2_MA0143.3	-13	0	+	0	0	.
chr15	82102976	82102977	chr15:82102977:A:T	rs2665119	A	T	A	Sox2_MA0143.3	-13	0	+	0	0	.
chr15	82113299	82113300	chr15:82113300:T:C	rs2654210	T	C	T	Sox2_MA0143.3	18	0	-	0	0	.
chr15	82298535	82298536	chr15:82298536:C:G	rs1397650395	C	G	c	Sox2_MA0143.3	11	0	+	0	0	.
chr15	82304372	82304373	chr15:82304373:T:C	rs5025735	T	C	t	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr15	82381796	82381797	chr15:82381797:G:A	rs1474762800	G	A	N	Sox2_MA0143.3	-6	0	-	0	0	.
chr15	82384771	82384772	chr15:82384772:A:G	rs3865042	A	G	N	Sox2_MA0143.3	14	0	-	0	0	.
chr15	82502632	82502633	chr15:82502633:G:T	rs771644950	G	T	G	Sox2_MA0143.3	23	0	+	0	0	.
chr15	82534105	82534106	chr15:82534106:T:C	rs958513	T	C	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr15	82537999	82538000	chr15:82538000:C:G	rs1651959	C	G	C	Sox2_MA0143.3	26	0	-	0	0	.
chr15	82570735	82570736	chr15:82570736:A:C	rs783543	A	C	A	Sox2_MA0143.3	-12	0	-	0	0	.
chr15	82646813	82646814	chr15:82646814:G:A	rs114600259	G	A	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr15	82646838	82646839	chr15:82646839:C:A	rs587690773	C	A	C	Sox2_MA0143.3	15	0	+	0	0	.
chr15	82674019	82674020	chr15:82674020:A:G	rs4779046	A	G	G	Sox2_MA0143.3	-14	0	+	0	0	.
chr15	82878273	82878274	chr15:82878274:T:C	rs2667384	T	C	T	Sox2_MA0143.3	2	1	-	9.613475778572903	3.494828071296623	CCATTGTT
chr15	83026353	83026354	chr15:83026354:C:T	rs11858162	C	T	C	Sox2_MA0143.3	-20	0	-	0	0	.
chr15	83100242	83100243	chr15:83100243:T:C	rs67988460	T	C	T	Sox2_MA0143.3	6	1	+	9.613475778572903	2.7047209992576837	CCATTGTT
chr15	83155157	83155158	chr15:83155158:A:C	rs8038486	A	C	C	Sox2_MA0143.3	8	0	+	0	0	.
chr15	83165571	83165572	chr15:83165572:C:G	rs28567531	C	G	C	Sox2_MA0143.3	17	0	+	0	0	.
chr15	83200391	83200392	chr15:83200392:G:A	rs28479708	G	A	G	Sox2_MA0143.3	10	0	-	0	0	.
chr15	83208306	83208307	chr15:83208307:G:C	chr15:83208307:G:C	G	C	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr15	83711523	83711524	chr15:83711524:T:C	rs57372822	T	C	T	Sox2_MA0143.3	6	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr15	84058200	84058201	chr15:84058201:G:A	rs62026490	G	A	G	Sox2_MA0143.3	11	0	-	0	0	.
chr15	84500405	84500406	chr15:84500406:C:T	rs1460008064	C	T	.	Sox2_MA0143.3	-18	0	+	0	0	.
chr15	84570508	84570509	chr15:84570509:C:G	rs79424432	C	G	g	Sox2_MA0143.3	-16	0	+	0	0	.
chr15	84600497	84600498	chr15:84600498:G:T	rs1031189359	G	T	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr15	84600513	84600514	chr15:84600514:C:T	chr15:84600514:C:T	C	T	C	Sox2_MA0143.3	-20	0	-	0	0	.
chr15	84657522	84657523	chr15:84657523:G:T	rs2292462	G	T	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr15	84817810	84817811	chr15:84817811:T:G	rs7179643	T	G	G	Sox2_MA0143.3	23	0	-	0	0	.
chr15	84828669	84828670	chr15:84828670:T:C	rs117559848	T	C	T	Sox2_MA0143.3	-17	0	+	0	0	.
chr15	84828712	84828713	chr15:84828713:G:T	rs7183401	G	T	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr15	84828727	84828728	chr15:84828728:C:T	rs75783811	C	T	C	Sox2_MA0143.3	0	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr15	84836312	84836313	chr15:84836313:T:C	rs7164817	T	C	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr15	84866708	84866709	chr15:84866709:A:C	rs7182119	A	C	A	Sox2_MA0143.3	7	1	+	3.5547341015215945	9.206767037375712	CCTTTGTA
chr15	84942832	84942833	chr15:84942833:G:T	rs28396854	G	T	G	Sox2_MA0143.3	18	0	-	0	0	.
chr15	84951135	84951136	chr15:84951136:C:T	rs377168225	C	T	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr15	84959880	84959881	chr15:84959881:G:A	rs71397834	G	A	G	Sox2_MA0143.3	20	0	+	0	0	.
chr15	84970413	84970414	chr15:84970414:A:C	rs35619798	A	C	a	Sox2_MA0143.3	-8	0	+	0	0	.
chr15	85076016	85076017	chr15:85076017:C:T	rs11631548	C	T	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr15	85105209	85105210	chr15:85105210:G:C	rs11073939	G	C	C	Sox2_MA0143.3	23	0	+	0	0	.
chr15	85282591	85282592	chr15:85282592:G:A	rs12443155	G	A	a	Sox2_MA0143.3	27	0	+	0	0	.
chr15	85345065	85345066	chr15:85345066:C:T	rs537949893	C	T	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr15	85395923	85395924	chr15:85395924:T:A	rs28440013	T	A	T	Sox2_MA0143.3	25	0	-	0	0	.
chr15	85443577	85443578	chr15:85443578:G:A	rs74743550	G	A	G	Sox2_MA0143.3	14	0	-	0	0	.
chr15	85453965	85453966	chr15:85453966:A:G	rs8027605	A	G	A	Sox2_MA0143.3	18	0	-	0	0	.
chr15	85493416	85493417	chr15:85493417:C:T	rs7169429	C	T	T	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr15	85501983	85501984	chr15:85501984:G:A	rs7163958	G	A	A	Sox2_MA0143.3	19	0	+	0	0	.
chr15	85536225	85536226	chr15:85536226:T:C	rs7173944	T	C	T	Sox2_MA0143.3	8	0	-	0	0	.
chr15	85550541	85550542	chr15:85550542:C:T	rs78803399	C	T	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr15	85585485	85585486	chr15:85585486:C:T	rs10520595	C	T	C	Sox2_MA0143.3	11	0	-	0	0	.
chr15	85597559	85597560	chr15:85597560:G:A	rs17633749	G	A	g	Sox2_MA0143.3	-8	0	+	0	0	.
chr15	85597560	85597561	chr15:85597561:C:G	rs115261427	C	G	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr15	85636519	85636520	chr15:85636520:G:C	rs191307335	G	C	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr15	85689809	85689810	chr15:85689810:C:T	rs139765638	C	T	C	Sox2_MA0143.3	0	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr15	85702536	85702537	chr15:85702537:C:T	rs144603053	C	T	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr15	85702583	85702584	chr15:85702584:G:A	rs12437886	G	A	G	Sox2_MA0143.3	7	1	+	8.676919043985553	3.3675628303222993	CCATTGTG
chr15	85751328	85751329	chr15:85751329:T:G	rs556882653	T	G	T	Sox2_MA0143.3	-1	0	+	0	0	.
chr15	85752157	85752158	chr15:85752158:C:T	rs117647357	C	T	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr15	85752198	85752199	chr15:85752199:T:C	rs946355036	T	C	T	Sox2_MA0143.3	21	0	+	0	0	.
chr15	85759411	85759412	chr15:85759412:T:C	rs2554	T	C	T	Sox2_MA0143.3	11	0	+	0	0	.
chr15	85786196	85786197	chr15:85786197:C:T	rs2542607	C	T	C	Sox2_MA0143.3	20	0	+	0	0	.
chr15	85788896	85788897	chr15:85788897:C:T	rs16944522	C	T	C	Sox2_MA0143.3	9	0	-	0	0	.
chr15	85793915	85793916	chr15:85793916:G:A	rs151099230	G	A	G	Sox2_MA0143.3	27	0	-	0	0	.
chr15	85805637	85805638	chr15:85805638:T:C	rs62022964	T	C	T	Sox2_MA0143.3	27	0	-	0	0	.
chr15	85831353	85831354	chr15:85831354:A:G	rs17641851	A	G	A	Sox2_MA0143.3	9	0	-	0	0	.
chr15	85854460	85854461	chr15:85854461:C:G	rs770064451	C	G	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr15	85859060	85859061	chr15:85859061:C:T	rs112480582	C	T	C	Sox2_MA0143.3	8	0	-	0	0	.
chr15	85890347	85890348	chr15:85890348:T:G	rs11073596	T	G	T	Sox2_MA0143.3	4	1	+	3.5547341015215945	-3.3540206777936254	CCTTTGTA
chr15	86162309	86162310	chr15:86162310:C:G	rs567591386	C	G	C	Sox2_MA0143.3	19	0	+	0	0	.
chr15	86164489	86164490	chr15:86164490:C:A	chr15:86164490:C:A	C	A	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr15	86164490	86164491	chr15:86164491:G:T	rs16948824	G	T	T	Sox2_MA0143.3	-11	0	+	0	0	.
chr15	86164500	86164501	chr15:86164501:C:T	rs118062949	C	T	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr15	86201687	86201688	chr15:86201688:A:T	rs34683341	A	T	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr15	86201688	86201689	chr15:86201689:T:G	rs55881397	T	G	T	Sox2_MA0143.3	2	1	-	8.676919043985553	2.5582713367092715	CCATTGTG
chr15	86263439	86263440	chr15:86263440:C:G	rs4887217	C	G	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr15	86327664	86327665	chr15:86327665:G:A	rs183571993	G	A	G	Sox2_MA0143.3	16	0	+	0	0	.
chr15	86816231	86816232	chr15:86816232:T:C	rs12439345	T	C	T	Sox2_MA0143.3	9	0	-	0	0	.
chr15	86837939	86837940	chr15:86837940:T:C	rs76591130	T	C	T	Sox2_MA0143.3	21	0	+	0	0	.
chr15	86866246	86866247	chr15:86866247:G:A	rs112579357	G	A	A	Sox2_MA0143.3	-1	0	-	0	0	.
chr15	86877215	86877216	chr15:86877216:G:A	chr15:86877216:G:A	G	A	G	Sox2_MA0143.3	25	0	-	0	0	.
chr15	86878371	86878372	chr15:86878372:G:A	rs62032641	G	A	G	Sox2_MA0143.3	5	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr15	86894667	86894668	chr15:86894668:A:G	rs12441511	A	G	G	Sox2_MA0143.3	2	1	-	8.864090315184848	2.5582713367092715	CCTTTGTG
chr15	86963804	86963805	chr15:86963805:G:A	rs2594340	G	A	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr15	86968960	86968961	chr15:86968961:G:A	rs1433447	G	A	A	Sox2_MA0143.3	11	0	-	0	0	.
chr15	86988379	86988380	chr15:86988380:G:T	rs1560778	G	T	G	Sox2_MA0143.3	7	1	+	8.864090315184848	9.800647049772198	CCTTTGTG
chr15	87188229	87188230	chr15:87188230:T:A	rs12438170	T	A	a	Sox2_MA0143.3	7	1	+	9.613475778572903	3.3675628303222993	CCATTGTT
chr15	87212362	87212363	chr15:87212363:G:A	rs3913351	G	A	A	Sox2_MA0143.3	-6	0	+	0	0	.
chr15	87212372	87212373	chr15:87212373:T:G	rs142393151	T	G	G	Sox2_MA0143.3	4	1	+	9.800647049772198	2.8918922704569785	CCTTTGTT
chr15	87274315	87274316	chr15:87274316:G:T	rs12909748	G	T	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr15	87281353	87281354	chr15:87281354:A:C	rs62033610	A	C	A	Sox2_MA0143.3	19	0	+	0	0	.
chr15	87735379	87735380	chr15:87735380:A:C	rs28711119	A	C	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr15	87737239	87737240	chr15:87737240:A:C	rs146319947	A	C	A	Sox2_MA0143.3	8	0	-	0	0	.
chr15	87971623	87971624	chr15:87971624:G:C	rs28735437	G	C	G	Sox2_MA0143.3	9	0	+	0	0	.
chr15	87973951	87973952	chr15:87973952:C:T	rs147519176	C	T	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr15	88076756	88076757	chr15:88076757:G:C	rs188392921	G	C	G	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr15	88132256	88132257	chr15:88132257:C:G	rs10163123	C	G	C	Sox2_MA0143.3	19	0	-	0	0	.
chr15	88245513	88245514	chr15:88245514:G:A	rs7182602	G	A	G	Sox2_MA0143.3	-16	0	-	0	0	.
chr15	88252683	88252684	chr15:88252684:G:A	rs78118637	G	A	G	Sox2_MA0143.3	26	0	+	0	0	.
chr15	88367142	88367143	chr15:88367143:G:A	rs12914709	G	A	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr15	88385306	88385307	chr15:88385307:G:A	rs1392677193	G	A	G	Sox2_MA0143.3	16	0	+	0	0	.
chr15	88626626	88626627	chr15:88626627:A:G	rs8027765	A	G	G	Sox2_MA0143.3	20	0	+	0	0	.
chr15	88637072	88637073	chr15:88637073:T:G	rs6496514	T	G	G	Sox2_MA0143.3	13	0	+	0	0	.
chr15	88639234	88639235	chr15:88639235:C:T	rs62023331	C	T	T	Sox2_MA0143.3	11	0	-	0	0	.
chr15	88649523	88649524	chr15:88649524:G:T	rs141782141	G	T	G	Sox2_MA0143.3	24	0	-	0	0	.
chr15	88649564	88649565	chr15:88649565:A:T	rs115462491	A	T	A	Sox2_MA0143.3	-17	0	-	0	0	.
chr15	88659678	88659679	chr15:88659679:C:T	rs185527492	C	T	C	Sox2_MA0143.3	10	0	+	0	0	.
chr15	88699900	88699901	chr15:88699901:G:A	rs73460929	G	A	G	Sox2_MA0143.3	17	0	+	0	0	.
chr15	88841716	88841717	chr15:88841717:C:T	rs74952262	C	T	C	Sox2_MA0143.3	22	0	+	0	0	.
chr15	88912973	88912974	chr15:88912974:C:T	rs192944573	C	T	C	Sox2_MA0143.3	1	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr15	88914091	88914092	chr15:88914092:C:T	rs78576823	C	T	C	Sox2_MA0143.3	1	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr15	89070179	89070180	chr15:89070180:A:G	rs12437650	A	G	A	Sox2_MA0143.3	12	0	-	0	0	.
chr15	89109320	89109321	chr15:89109321:G:A	rs293385	G	A	A	Sox2_MA0143.3	13	0	+	0	0	.
chr15	89167698	89167699	chr15:89167699:T:A	chr15:89167699:T:A	T	A	T	Sox2_MA0143.3	-12	0	-	0	0	.
chr15	89370025	89370026	chr15:89370026:C:T	rs143590968	C	T	C	Sox2_MA0143.3	17	0	+	0	0	.
chr15	89396218	89396219	chr15:89396219:G:T	rs62022631	G	T	G	Sox2_MA0143.3	26	0	+	0	0	.
chr15	89400105	89400106	chr15:89400106:C:T	rs150299	C	T	C	Sox2_MA0143.3	24	0	+	0	0	.
chr15	89421399	89421400	chr15:89421400:A:G	rs12899578	A	G	A	Sox2_MA0143.3	3	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr15	89459906	89459907	chr15:89459907:G:A	rs117785224	G	A	G	Sox2_MA0143.3	5	1	+	9.613475778572903	2.7047209992576837	CCATTGTT
chr15	89504030	89504031	chr15:89504031:G:A	rs62023067	G	A	G	Sox2_MA0143.3	17	0	-	0	0	.
chr15	89505196	89505197	chr15:89505197:T:C	rs8031036	T	C	C	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr15	89556700	89556701	chr15:89556701:A:G	rs16943330	A	G	G	Sox2_MA0143.3	-3	0	+	0	0	.
chr15	89556847	89556848	chr15:89556848:G:T	rs1343236838	G	T	G	Sox2_MA0143.3	21	0	+	0	0	.
chr15	89631039	89631040	chr15:89631040:G:A	rs8029913	G	A	A	Sox2_MA0143.3	-20	0	+	0	0	.
chr15	89646443	89646444	chr15:89646444:G:A	rs148642238	G	A	G	Sox2_MA0143.3	15	0	+	0	0	.
chr15	89704557	89704558	chr15:89704558:A:G	rs76362274	A	G	A	Sox2_MA0143.3	-19	0	+	0	0	.
chr15	89802103	89802104	chr15:89802104:G:A	rs2007084	G	A	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr15	89811248	89811249	chr15:89811249:C:T	rs12441282	C	T	C	Sox2_MA0143.3	19	0	+	0	0	.
chr15	89899907	89899908	chr15:89899908:T:C	rs3853638	T	C	T	Sox2_MA0143.3	2	1	-	8.676919043985553	2.5582713367092715	CCATTGTG
chr15	89907996	89907997	chr15:89907997:T:G	rs986688715	T	G	T	Sox2_MA0143.3	-4	0	-	0	0	.
chr15	89947137	89947138	chr15:89947138:T:A	rs3913880	T	A	T	Sox2_MA0143.3	25	0	-	0	0	.
chr15	90035220	90035221	chr15:90035221:G:A	rs4932276	G	A	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr15	90062096	90062097	chr15:90062097:G:A	rs984078789	G	A	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr15	90101838	90101839	chr15:90101839:G:A	rs1415517553	G	A	G	Sox2_MA0143.3	5	1	+	9.206767037375712	2.298012258060492	CCTTTGTC
chr15	90102171	90102172	chr15:90102172:C:T	rs149712510	C	T	C	Sox2_MA0143.3	26	0	+	0	0	.
chr15	90108649	90108650	chr15:90108650:C:G	rs11637880	C	G	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr15	90152199	90152200	chr15:90152200:C:A	rs12905919	C	A	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr15	90161273	90161274	chr15:90161274:A:G	rs17245269	A	G	A	Sox2_MA0143.3	13	0	-	0	0	.
chr15	90161293	90161294	chr15:90161294:G:T	chr15:90161294:G:T	G	T	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr15	90175652	90175653	chr15:90175653:G:A	rs12591277	G	A	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr15	90345878	90345879	chr15:90345879:C:T	rs7183944	C	T	C	Sox2_MA0143.3	0	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr15	90364967	90364968	chr15:90364968:C:T	rs2601163	C	T	C	Sox2_MA0143.3	12	0	+	0	0	.
chr15	90553554	90553555	chr15:90553555:A:C	rs149322872	A	C	A	Sox2_MA0143.3	-6	0	+	0	0	.
chr15	90563834	90563835	chr15:90563835:T:C	rs8024734	T	C	C	Sox2_MA0143.3	9	0	+	0	0	.
chr15	90564561	90564562	chr15:90564562:A:C	rs16944572	A	C	A	Sox2_MA0143.3	-11	0	-	0	0	.
chr15	90571502	90571503	chr15:90571503:T:G	rs7180053	T	G	G	Sox2_MA0143.3	25	0	-	0	0	.
chr15	90571515	90571516	chr15:90571516:C:T	rs118011960	C	T	C	Sox2_MA0143.3	12	0	-	0	0	.
chr15	90583999	90584000	chr15:90584000:C:T	rs75378962	C	T	C	Sox2_MA0143.3	23	0	+	0	0	.
chr15	90584081	90584082	chr15:90584082:C:T	rs12438950	C	T	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr15	90816409	90816410	chr15:90816410:T:A	rs16944884	T	A	T	Sox2_MA0143.3	-17	0	+	0	0	.
chr15	90818643	90818644	chr15:90818644:C:T	rs9282618	C	T	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr15	90821934	90821935	chr15:90821935:T:C	rs372098	T	C	T	Sox2_MA0143.3	6	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr15	90821938	90821939	chr15:90821939:T:C	rs372088	T	C	C	Sox2_MA0143.3	10	0	+	0	0	.
chr15	90838686	90838687	chr15:90838687:G:A	rs4932368	G	A	G	Sox2_MA0143.3	-14	0	+	0	0	.
chr15	90838708	90838709	chr15:90838709:G:A	rs16944909	G	A	T	Sox2_MA0143.3	8	0	+	0	0	.
chr15	90885358	90885359	chr15:90885359:T:G	rs7183988	T	G	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr15	90933167	90933168	chr15:90933168:C:T	rs7166987	C	T	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr15	90933168	90933169	chr15:90933169:G:T	rs75937020	G	T	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr15	90954284	90954285	chr15:90954285:A:G	rs3743452	A	G	A	Sox2_MA0143.3	15	0	-	0	0	.
chr15	90956097	90956098	chr15:90956098:C:T	rs1550638	C	T	T	Sox2_MA0143.3	19	0	+	0	0	.
chr15	90956582	90956583	chr15:90956583:G:A	rs8041774	G	A	A	Sox2_MA0143.3	11	0	+	0	0	.
chr15	91051724	91051725	chr15:91051725:C:T	rs6496755	C	T	c	Sox2_MA0143.3	-5	0	+	0	0	.
chr15	91125411	91125412	chr15:91125412:G:C	rs17594201	G	C	G	Sox2_MA0143.3	-11	0	+	0	0	.
chr15	91157873	91157874	chr15:91157874:T:C	rs2892181	T	C	T	Sox2_MA0143.3	27	0	+	0	0	.
chr15	91225169	91225170	chr15:91225170:G:A	rs11630131	G	A	G	Sox2_MA0143.3	20	0	+	0	0	.
chr15	91357394	91357395	chr15:91357395:A:G	rs10520694	A	G	A	Sox2_MA0143.3	20	0	-	0	0	.
chr15	91426304	91426305	chr15:91426305:C:A	rs4244890	C	A	A	Sox2_MA0143.3	-5	0	+	0	0	.
chr15	91470151	91470152	chr15:91470152:A:G	rs62028018	A	G	G	Sox2_MA0143.3	4	1	-	8.676919043985553	1.7681642646703322	CCATTGTG
chr15	91470159	91470160	chr15:91470160:C:T	rs36094120	C	T	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr15	91499931	91499932	chr15:91499932:C:T	rs72754251	C	T	T	Sox2_MA0143.3	-7	0	-	0	0	.
chr15	91499942	91499943	chr15:91499943:T:C	rs4932498	T	C	T	Sox2_MA0143.3	-18	0	-	0	0	.
chr15	91500206	91500207	chr15:91500207:C:T	rs72754253	C	T	T	Sox2_MA0143.3	-11	0	+	0	0	.
chr15	91500231	91500232	chr15:91500232:A:T	rs72754255	A	T	T	Sox2_MA0143.3	14	0	+	0	0	.
chr15	91620566	91620567	chr15:91620567:C:T	rs4932505	C	T	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr15	91664415	91664416	chr15:91664416:A:G	rs7402098	A	G	A	Sox2_MA0143.3	-14	0	-	0	0	.
chr15	91857883	91857884	chr15:91857884:C:T	rs144498589	C	T	C	Sox2_MA0143.3	17	0	-	0	0	.
chr15	91860666	91860667	chr15:91860667:G:A	rs189507672	G	A	G	Sox2_MA0143.3	10	0	-	0	0	.
chr15	91947628	91947629	chr15:91947629:T:G	rs72754006	T	G	T	Sox2_MA0143.3	14	0	+	0	0	.
chr15	91968568	91968569	chr15:91968569:C:A	rs1356417	C	A	C	Sox2_MA0143.3	5	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr15	92026726	92026727	chr15:92026727:G:A	rs7181178	G	A	G	Sox2_MA0143.3	25	0	-	0	0	.
chr15	92070225	92070226	chr15:92070226:A:G	rs11074039	A	G	A	Sox2_MA0143.3	17	0	+	0	0	.
chr15	92102140	92102141	chr15:92102141:G:A	rs4984338	G	A	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr15	92112926	92112927	chr15:92112927:T:C	rs207958	T	C	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr15	92145750	92145751	chr15:92145751:C:T	rs886914	C	T	T	Sox2_MA0143.3	19	0	-	0	0	.
chr15	92153793	92153794	chr15:92153794:A:G	rs112275133	A	G	A	Sox2_MA0143.3	22	0	-	0	0	.
chr15	92153819	92153820	chr15:92153820:C:T	rs56066897	C	T	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr15	92171065	92171066	chr15:92171066:G:T	rs1165	G	T	G	Sox2_MA0143.3	10	0	+	0	0	.
chr15	92196460	92196461	chr15:92196461:T:C	rs4778038	T	C	T	Sox2_MA0143.3	10	0	+	0	0	.
chr15	92305941	92305942	chr15:92305942:C:T	rs12592793	C	T	T	Sox2_MA0143.3	-16	0	-	0	0	.
chr15	92363891	92363892	chr15:92363892:C:T	rs12900979	C	T	C	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr15	92377690	92377691	chr15:92377691:C:T	rs2101436	C	T	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr15	92392075	92392076	chr15:92392076:C:A	rs3759918	C	A	C	Sox2_MA0143.3	5	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr15	92395857	92395858	chr15:92395858:G:T	rs34744002	G	T	G	Sox2_MA0143.3	27	0	+	0	0	.
chr15	92409402	92409403	chr15:92409403:G:A	rs7176813	G	A	A	Sox2_MA0143.3	-16	0	+	0	0	.
chr15	92436815	92436816	chr15:92436816:C:A	rs11634070	C	A	A	Sox2_MA0143.3	-7	0	-	0	0	.
chr15	92458951	92458952	chr15:92458952:C:T	rs4777987	C	T	T	Sox2_MA0143.3	-18	0	-	0	0	.
chr15	92459213	92459214	chr15:92459214:A:G	rs4777988	A	G	-	Sox2_MA0143.3	-5	0	+	0	0	.
chr15	92519202	92519203	chr15:92519203:G:A	rs13379768	G	A	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr15	92519957	92519958	chr15:92519958:C:A	rs150377047	C	A	C	Sox2_MA0143.3	-12	0	-	0	0	.
chr15	92624298	92624299	chr15:92624299:T:C	rs189370781	T	C	T	Sox2_MA0143.3	-6	0	+	0	0	.
chr15	92624323	92624324	chr15:92624324:C:T	rs75956219	C	T	C	Sox2_MA0143.3	19	0	+	0	0	.
chr15	92624569	92624570	chr15:92624570:T:G	rs12917341	T	G	T	Sox2_MA0143.3	-13	0	+	0	0	.
chr15	92657166	92657167	chr15:92657167:A:G	rs426221	A	G	G	Sox2_MA0143.3	18	0	+	0	0	.
chr15	92669567	92669568	chr15:92669568:G:C	rs172263	G	C	.	Sox2_MA0143.3	16	0	+	0	0	.
chr15	92725925	92725926	chr15:92725926:G:C	rs8041556	G	C	c	Sox2_MA0143.3	13	0	-	0	0	.
chr15	92821813	92821814	chr15:92821814:A:G	rs151283899	A	G	A	Sox2_MA0143.3	10	0	+	0	0	.
chr15	92848255	92848256	chr15:92848256:C:T	rs8029902	C	T	T	Sox2_MA0143.3	-11	0	+	0	0	.
chr15	92883652	92883653	chr15:92883653:A:G	rs189700219	A	G	A	Sox2_MA0143.3	12	0	-	0	0	.
chr15	93025708	93025709	chr15:93025709:G:A	rs117000079	G	A	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr15	93062369	93062370	chr15:93062370:T:C	rs2293598	T	C	T	Sox2_MA0143.3	-9	0	-	0	0	.
chr15	93071910	93071911	chr15:93071911:A:G	chr15:93071911:A:G	A	G	A	Sox2_MA0143.3	-12	0	-	0	0	.
chr15	93119457	93119458	chr15:93119458:G:A	rs12438339	G	A	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr15	93152886	93152887	chr15:93152887:C:G	rs28610257	C	G	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr15	93255741	93255742	chr15:93255742:T:C	rs8038082	T	C	T	Sox2_MA0143.3	2	1	-	9.019595766176417	2.900948058900136	CCATTGTC
chr15	93302454	93302455	chr15:93302455:C:T	rs10083699	C	T	T	Sox2_MA0143.3	7	1	+	9.206767037375712	9.800647049772198	CCTTTGTC
chr15	93312927	93312928	chr15:93312928:G:T	rs114807127	G	T	G	Sox2_MA0143.3	15	0	-	0	0	.
chr15	93326390	93326391	chr15:93326391:G:C	rs1384738	G	C	a	Sox2_MA0143.3	24	0	+	0	0	.
chr15	93332185	93332186	chr15:93332186:G:A	rs1483315	G	A	A	Sox2_MA0143.3	-5	0	-	0	0	.
chr15	93338499	93338500	chr15:93338500:C:T	rs8034782	C	T	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr15	93338511	93338512	chr15:93338512:C:A	rs12148301	C	A	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr15	93348047	93348048	chr15:93348048:T:C	rs9972589	T	C	T	Sox2_MA0143.3	-8	0	+	0	0	.
chr15	93411302	93411303	chr15:93411303:A:C	rs9920873	A	C	A	Sox2_MA0143.3	17	0	+	0	0	.
chr15	93524611	93524612	chr15:93524612:A:G	rs11074195	A	G	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr15	93569185	93569186	chr15:93569186:A:T	rs11636465	A	T	A	Sox2_MA0143.3	-14	0	+	0	0	.
chr15	93684818	93684819	chr15:93684819:G:A	rs4444289	G	A	A	Sox2_MA0143.3	-11	0	+	0	0	.
chr15	93763998	93763999	chr15:93763999:G:C	rs7177347	G	C	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr15	93819720	93819721	chr15:93819721:T:A	rs7182465	T	A	A	Sox2_MA0143.3	20	0	+	0	0	.
chr15	93982758	93982759	chr15:93982759:C:G	rs79344848	C	G	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr15	93985003	93985004	chr15:93985004:T:C	rs1383004	T	C	C	Sox2_MA0143.3	22	0	+	0	0	.
chr15	94042243	94042244	chr15:94042244:A:G	rs77253794	A	G	A	Sox2_MA0143.3	3	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr15	94134942	94134943	chr15:94134943:T:C	rs77698158	T	C	T	Sox2_MA0143.3	13	0	+	0	0	.
chr15	94157788	94157789	chr15:94157789:C:T	rs58406321	C	T	C	Sox2_MA0143.3	12	0	+	0	0	.
chr15	94262828	94262829	chr15:94262829:G:C	rs6497193	G	C	C	Sox2_MA0143.3	0	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr15	94499133	94499134	chr15:94499134:A:C	rs62017700	A	C	a	Sox2_MA0143.3	14	0	+	0	0	.
chr15	94564401	94564402	chr15:94564402:A:G	rs966641	A	G	A	Sox2_MA0143.3	23	0	-	0	0	.
chr15	94844963	94844964	chr15:94844964:G:A	rs1194824475	G	A	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr15	94845237	94845238	chr15:94845238:A:C	rs11073394	A	C	A	Sox2_MA0143.3	-17	0	-	0	0	.
chr15	95018128	95018129	chr15:95018129:C:G	rs73455877	C	G	C	Sox2_MA0143.3	23	0	-	0	0	.
chr15	95396421	95396422	chr15:95396422:G:T	rs11858528	G	T	T	Sox2_MA0143.3	-5	0	-	0	0	.
chr15	95442230	95442231	chr15:95442231:T:C	rs7166727	T	C	C	Sox2_MA0143.3	-12	0	-	0	0	.
chr15	95469793	95469794	chr15:95469794:G:A	rs12899367	G	A	G	Sox2_MA0143.3	25	0	+	0	0	.
chr15	96011055	96011056	chr15:96011056:C:T	rs16975951	C	T	T	Sox2_MA0143.3	-7	0	+	0	0	.
chr15	96019361	96019362	chr15:96019362:C:T	rs115881554	C	T	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr15	96038801	96038802	chr15:96038802:T:A	rs62009468	T	A	T	Sox2_MA0143.3	6	1	+	8.676919043985553	1.7681642646703326	CCATTGTG
chr15	96038818	96038819	chr15:96038819:T:G	rs141022198	T	G	T	Sox2_MA0143.3	23	0	+	0	0	.
chr15	96047900	96047901	chr15:96047901:C:T	rs76410120	C	T	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr15	96123702	96123703	chr15:96123703:G:C	rs61505227	G	C	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr15	96171101	96171102	chr15:96171102:C:G	chr15:96171102:C:G	C	G	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr15	96203170	96203171	chr15:96203171:C:T	rs1107227	C	T	C	Sox2_MA0143.3	15	0	-	0	0	.
chr15	96232438	96232439	chr15:96232439:C:T	rs7167466	C	T	C	Sox2_MA0143.3	15	0	-	0	0	.
chr15	96275180	96275181	chr15:96275181:A:G	rs116255328	A	G	A	Sox2_MA0143.3	-12	0	+	0	0	.
chr15	96309156	96309157	chr15:96309157:G:A	rs57751619	G	A	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr15	96327587	96327588	chr15:96327588:A:G	rs3743462	A	G	A	Sox2_MA0143.3	8	0	-	0	0	.
chr15	96354936	96354937	chr15:96354937:T:C	rs12907625	T	C	T	Sox2_MA0143.3	3	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr15	96406841	96406842	chr15:96406842:G:T	rs2028197	G	T	G	Sox2_MA0143.3	0	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr15	96413342	96413343	chr15:96413343:G:A	rs11633033	G	A	G	Sox2_MA0143.3	13	0	+	0	0	.
chr15	96463410	96463411	chr15:96463411:G:A	rs11856825	G	A	G	Sox2_MA0143.3	27	0	-	0	0	.
chr15	97013467	97013468	chr15:97013468:G:A	rs2670914	G	A	A	Sox2_MA0143.3	25	0	-	0	0	.
chr15	97068054	97068055	chr15:97068055:C:T	rs7182371	C	T	T	Sox2_MA0143.3	-14	0	+	0	0	.
chr15	97370726	97370727	chr15:97370727:T:C	rs73466159	T	C	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr15	97792279	97792280	chr15:97792280:T:G	rs72769137	T	G	T	Sox2_MA0143.3	25	0	-	0	0	.
chr15	97817727	97817728	chr15:97817728:C:T	rs114377367	C	T	C	Sox2_MA0143.3	-5	0	-	0	0	.
chr15	97959068	97959069	chr15:97959069:G:T	rs78587666	G	T	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr15	98012591	98012592	chr15:98012592:T:C	rs11533749	T	C	T	Sox2_MA0143.3	4	1	+	8.676919043985553	1.7681642646703322	CCATTGTG
chr15	98070484	98070485	chr15:98070485:T:A	rs113073509	T	A	T	Sox2_MA0143.3	22	0	-	0	0	.
chr15	98103605	98103606	chr15:98103606:C:T	rs28714608	C	T	C	Sox2_MA0143.3	18	0	+	0	0	.
chr15	98155622	98155623	chr15:98155623:C:T	rs55869720	C	T	C	Sox2_MA0143.3	20	0	-	0	0	.
chr15	98234141	98234142	chr15:98234142:A:G	rs1442815	A	G	G	Sox2_MA0143.3	20	0	-	0	0	.
chr15	98253630	98253631	chr15:98253631:C:T	rs1867157	C	T	T	Sox2_MA0143.3	-10	0	+	0	0	.
chr15	98296771	98296772	chr15:98296772:G:A	rs114904060	G	A	A	Sox2_MA0143.3	-14	0	-	0	0	.
chr15	98351704	98351705	chr15:98351705:T:C	rs28469538	T	C	C	Sox2_MA0143.3	18	0	-	0	0	.
chr15	98360053	98360054	chr15:98360054:T:G	rs28396575	T	G	T	Sox2_MA0143.3	21	0	+	0	0	.
chr15	98382452	98382453	chr15:98382453:G:A	rs12902712	G	A	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr15	98408702	98408703	chr15:98408703:A:G	rs6598504	A	G	g	Sox2_MA0143.3	4	1	-	8.676919043985553	1.7681642646703322	CCATTGTG
chr15	98413773	98413774	chr15:98413774:T:C	rs7183449	T	C	.	Sox2_MA0143.3	-6	0	-	0	0	.
chr15	98442554	98442555	chr15:98442555:C:T	rs57205158	C	T	.	Sox2_MA0143.3	8	0	-	0	0	.
chr15	98591194	98591195	chr15:98591195:T:C	rs80280442	T	C	T	Sox2_MA0143.3	17	0	+	0	0	.
chr15	98650795	98650796	chr15:98650796:C:G	rs772864318	C	G	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr15	98710260	98710261	chr15:98710261:C:T	rs77763178	C	T	C	Sox2_MA0143.3	5	1	-	8.676919043985553	1.7681642646703324	CCATTGTG
chr15	98723296	98723297	chr15:98723297:T:C	rs1543106	T	C	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr15	98734663	98734664	chr15:98734664:A:G	rs45557931	A	G	A	Sox2_MA0143.3	-9	0	+	0	0	.
chr15	98769216	98769217	chr15:98769217:C:T	rs60146747	C	T	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr15	98823179	98823180	chr15:98823180:A:G	rs79826452	A	G	A	Sox2_MA0143.3	-15	0	-	0	0	.
chr15	98858695	98858696	chr15:98858696:C:T	rs111535560	C	T	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr15	98901458	98901459	chr15:98901459:G:C	rs56346220	G	C	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr15	98903717	98903718	chr15:98903718:C:G	rs28708678	C	G	C	Sox2_MA0143.3	7	1	-	8.864090315184848	9.206767037375712	CCTTTGTG
chr15	98911133	98911134	chr15:98911134:A:G	rs2715415	A	G	A	Sox2_MA0143.3	-14	0	-	0	0	.
chr15	98960682	98960683	chr15:98960683:C:T	rs367863292	C	T	C	Sox2_MA0143.3	-12	0	-	0	0	.
chr15	99017729	99017730	chr15:99017730:A:G	rs11247053	A	G	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr15	99019777	99019778	chr15:99019778:C:T	rs561932931	C	T	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr15	99064313	99064314	chr15:99064314:G:A	rs260092	G	A	G	Sox2_MA0143.3	12	0	-	0	0	.
chr15	99065514	99065515	chr15:99065515:G:A	rs174274	G	A	A	Sox2_MA0143.3	-12	0	-	0	0	.
chr15	99075987	99075988	chr15:99075988:A:T	rs72754897	A	T	A	Sox2_MA0143.3	-9	0	-	0	0	.
chr15	99134822	99134823	chr15:99134823:A:G	rs3210942	A	G	G	Sox2_MA0143.3	-12	0	+	0	0	.
chr15	99182346	99182347	chr15:99182347:G:T	rs1424562595	G	T	G	Sox2_MA0143.3	15	0	-	0	0	.
chr15	99202357	99202358	chr15:99202358:T:C	rs2623178	T	C	T	Sox2_MA0143.3	3	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr15	99202371	99202372	chr15:99202372:G:A	rs2602037	G	A	G	Sox2_MA0143.3	17	0	+	0	0	.
chr15	99252362	99252363	chr15:99252363:C:T	rs77139689	C	T	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr15	99282828	99282829	chr15:99282829:A:T	rs35103557	A	T	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr15	99295540	99295541	chr15:99295541:C:G	rs34583616	C	G	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr15	99334157	99334158	chr15:99334158:C:T	rs7177149	C	T	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr15	99410373	99410374	chr15:99410374:A:G	rs74035717	A	G	G	Sox2_MA0143.3	3	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr15	99436915	99436916	chr15:99436916:T:C	rs28393358	T	C	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr15	99474279	99474280	chr15:99474280:T:C	rs7165608	T	C	t	Sox2_MA0143.3	-5	0	-	0	0	.
chr15	99482608	99482609	chr15:99482609:G:T	rs146985072	G	T	G	Sox2_MA0143.3	27	0	-	0	0	.
chr15	99564384	99564385	chr15:99564385:T:C	rs74033745	T	C	T	Sox2_MA0143.3	-13	0	+	0	0	.
chr15	99629285	99629286	chr15:99629286:G:A	rs112032286	G	A	G	Sox2_MA0143.3	8	0	-	0	0	.
chr15	99703466	99703467	chr15:99703467:G:A	rs3730281	G	A	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr15	99708851	99708852	chr15:99708852:T:C	rs167805	T	C	T	Sox2_MA0143.3	9	0	-	0	0	.
chr15	99732208	99732209	chr15:99732209:T:C	rs6422004	T	C	T	Sox2_MA0143.3	9	0	+	0	0	.
chr15	99741538	99741539	chr15:99741539:G:T	rs1470922	G	T	G	Sox2_MA0143.3	5	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr15	99764095	99764096	chr15:99764096:G:A	rs2958973	G	A	A	Sox2_MA0143.3	5	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr15	99777270	99777271	chr15:99777271:T:C	rs8038388	T	C	T	Sox2_MA0143.3	24	0	+	0	0	.
chr15	99820512	99820513	chr15:99820513:G:C	rs56096943	G	C	G	Sox2_MA0143.3	8	0	+	0	0	.
chr15	99855602	99855603	chr15:99855603:A:G	rs111297028	A	G	A	Sox2_MA0143.3	2	1	+	8.676919043985553	2.5582713367092715	CCATTGTG
chr15	99907917	99907918	chr15:99907918:G:A	rs34250263	G	A	G	Sox2_MA0143.3	23	0	-	0	0	.
chr15	99928744	99928745	chr15:99928745:T:A	rs145739620	T	A	T	Sox2_MA0143.3	-19	0	-	0	0	.
chr15	99956530	99956531	chr15:99956531:G:A	rs8030132	G	A	A	Sox2_MA0143.3	11	0	+	0	0	.
chr15	99957003	99957004	chr15:99957004:A:G	rs12442286	A	G	C	Sox2_MA0143.3	3	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr15	99957236	99957237	chr15:99957237:C:T	rs74564871	C	T	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr15	99978355	99978356	chr15:99978356:G:C	rs111525734	G	C	G	Sox2_MA0143.3	26	0	-	0	0	.
chr15	99978362	99978363	chr15:99978363:C:G	rs7164441	C	G	G	Sox2_MA0143.3	19	0	-	0	0	.
chr15	100010120	100010121	chr15:100010121:T:C	rs2727152	T	C	T	Sox2_MA0143.3	-4	0	+	0	0	.
chr15	100030102	100030103	chr15:100030103:T:G	rs2727175	T	G	T	Sox2_MA0143.3	13	0	+	0	0	.
chr15	100094684	100094685	chr15:100094685:A:G	rs58082560	A	G	A	Sox2_MA0143.3	23	0	-	0	0	.
chr15	100094712	100094713	chr15:100094713:C:T	rs11247149	C	T	T	Sox2_MA0143.3	-5	0	-	0	0	.
chr15	100105668	100105669	chr15:100105669:T:C	rs74037367	T	C	T	Sox2_MA0143.3	17	0	+	0	0	.
chr15	100109393	100109394	chr15:100109394:C:T	rs13379647	C	T	T	Sox2_MA0143.3	14	0	-	0	0	.
chr15	100109676	100109677	chr15:100109677:G:A	rs35123872	G	A	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr15	100119243	100119244	chr15:100119244:G:A	rs1552100	G	A	g	Sox2_MA0143.3	-14	0	+	0	0	.
chr15	100127110	100127111	chr15:100127111:G:A	rs12438787	G	A	G	Sox2_MA0143.3	12	0	-	0	0	.
chr15	100127141	100127142	chr15:100127142:G:A	rs113591466	G	A	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr15	100205788	100205789	chr15:100205789:C:A	rs4572372	C	A	A	Sox2_MA0143.3	26	0	-	0	0	.
chr15	100215423	100215424	chr15:100215424:G:A	rs74037561	G	A	g	Sox2_MA0143.3	17	0	+	0	0	.
chr15	100261236	100261237	chr15:100261237:A:G	rs4965612	A	G	G	Sox2_MA0143.3	18	0	-	0	0	.
chr15	100263978	100263979	chr15:100263979:G:A	rs28583454	G	A	G	Sox2_MA0143.3	23	0	-	0	0	.
chr15	100267395	100267396	chr15:100267396:T:C	rs4641723	T	C	T	Sox2_MA0143.3	-17	0	+	0	0	.
chr15	100304730	100304731	chr15:100304731:G:A	rs11247182	G	A	A	Sox2_MA0143.3	15	0	+	0	0	.
chr15	100317281	100317282	chr15:100317282:T:C	rs59193298	T	C	T	Sox2_MA0143.3	2	1	-	9.019595766176417	2.900948058900136	CCATTGTC
chr15	100410408	100410409	chr15:100410409:T:G	rs2011450	T	G	T	Sox2_MA0143.3	-7	0	-	0	0	.
chr15	100664147	100664148	chr15:100664148:G:A	rs567979574	G	A	G	Sox2_MA0143.3	13	0	+	0	0	.
chr15	100684568	100684569	chr15:100684569:T:C	rs111905748	T	C	T	Sox2_MA0143.3	23	0	-	0	0	.
chr15	100689074	100689075	chr15:100689075:C:T	rs1689952	C	T	c	Sox2_MA0143.3	19	0	+	0	0	.
chr15	100717194	100717195	chr15:100717195:C:T	rs766884151	C	T	c	Sox2_MA0143.3	13	0	-	0	0	.
chr15	100725352	100725353	chr15:100725353:C:T	rs72763026	C	T	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr15	100725514	100725515	chr15:100725515:G:C	rs59503020	G	C	G	Sox2_MA0143.3	14	0	-	0	0	.
chr15	100727490	100727491	chr15:100727491:C:A	rs79747895	C	A	C	Sox2_MA0143.3	17	0	+	0	0	.
chr15	100737163	100737164	chr15:100737164:A:G	rs114843438	A	G	A	Sox2_MA0143.3	-4	0	+	0	0	.
chr15	100765807	100765808	chr15:100765808:C:G	rs894316	C	G	G	Sox2_MA0143.3	21	0	+	0	0	.
chr15	100769775	100769776	chr15:100769776:T:C	rs7174311	T	C	T	Sox2_MA0143.3	21	0	-	0	0	.
chr15	100782785	100782786	chr15:100782786:C:T	rs12909939	C	T	C	Sox2_MA0143.3	10	0	-	0	0	.
chr15	100809762	100809763	chr15:100809763:T:C	rs35206288	T	C	T	Sox2_MA0143.3	2	1	-	9.019595766176417	2.900948058900136	CCATTGTC
chr15	100910018	100910019	chr15:100910019:G:T	rs4646688	G	T	T	Sox2_MA0143.3	5	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr15	101056440	101056441	chr15:101056441:A:G	rs11247257	A	G	A	Sox2_MA0143.3	15	0	-	0	0	.
chr15	101058153	101058154	chr15:101058154:G:A	rs11247259	G	A	G	Sox2_MA0143.3	-14	0	+	0	0	.
chr15	101087305	101087306	chr15:101087306:G:T	rs566557307	G	T	G	Sox2_MA0143.3	18	0	-	0	0	.
chr15	101091789	101091790	chr15:101091790:T:C	rs187990333	T	C	T	Sox2_MA0143.3	12	0	+	0	0	.
chr15	101127858	101127859	chr15:101127859:A:C	chr15:101127859:A:C	A	C	A	Sox2_MA0143.3	23	0	-	0	0	.
chr15	101127875	101127876	chr15:101127876:A:G	rs114043584	A	G	a	Sox2_MA0143.3	6	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr15	101178196	101178197	chr15:101178197:T:A	rs141305214	T	A	T	Sox2_MA0143.3	-15	0	-	0	0	.
chr15	101191632	101191633	chr15:101191633:A:G	rs4489986	A	G	A	Sox2_MA0143.3	-18	0	-	0	0	.
chr15	101243086	101243087	chr15:101243087:C:T	rs12324414	C	T	T	Sox2_MA0143.3	17	0	-	0	0	.
chr15	101258262	101258263	chr15:101258263:C:T	rs118132065	C	T	C	Sox2_MA0143.3	19	0	-	0	0	.
chr15	101258297	101258298	chr15:101258298:C:A	chr15:101258298:C:A	C	A	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr15	101273711	101273712	chr15:101273712:C:T	rs4965814	C	T	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr15	101288717	101288718	chr15:101288718:A:C	rs8027101	A	C	A	Sox2_MA0143.3	-18	0	+	0	0	.
chr15	101334557	101334558	chr15:101334558:A:G	rs12916087	A	G	A	Sox2_MA0143.3	21	0	-	0	0	.
chr15	101366983	101366984	chr15:101366984:A:G	rs756559	A	G	G	Sox2_MA0143.3	15	0	-	0	0	.
chr15	101369241	101369242	chr15:101369242:A:G	rs2955968	A	G	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr15	101388642	101388643	chr15:101388643:T:C	rs7168748	T	C	C	Sox2_MA0143.3	14	0	-	0	0	.
chr15	101405487	101405488	chr15:101405488:G:A	rs118016611	G	A	G	Sox2_MA0143.3	24	0	+	0	0	.
chr15	101475053	101475054	chr15:101475054:G:A	rs7183705	G	A	A	Sox2_MA0143.3	18	0	-	0	0	.
chr15	101482128	101482129	chr15:101482129:T:C	rs8043067	T	C	T	Sox2_MA0143.3	3	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr15	101545038	101545039	chr15:101545039:T:G	rs11247304	T	G	T	Sox2_MA0143.3	6	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr15	101561554	101561555	chr15:101561555:A:G	rs8038697	A	G	G	Sox2_MA0143.3	2	1	-	9.800647049772198	3.494828071296623	CCTTTGTT
chr15	101607276	101607277	chr15:101607277:C:T	rs111596460	C	T	C	Sox2_MA0143.3	16	0	+	0	0	.
chr15	101965682	101965683	chr15:101965683:T:C	rs866295521	T	C	t	Sox2_MA0143.3	17	0	+	0	0	.
chr16	65658	65659	chr16:65659:C:A	rs2562148	C	A	A	Sox2_MA0143.3	24	0	-	0	0	.
chr16	76662	76663	chr16:76663:G:T	rs139616835	G	T	g	Sox2_MA0143.3	0	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr16	229117	229118	chr16:229118:C:G	rs11863890	C	G	C	Sox2_MA0143.3	11	0	-	0	0	.
chr16	229145	229146	chr16:229146:G:T	rs74527341	G	T	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr16	236982	236983	chr16:236983:T:C	rs8051485	T	C	t	Sox2_MA0143.3	-15	0	+	0	0	.
chr16	292770	292771	chr16:292771:C:T	rs12928131	C	T	C	Sox2_MA0143.3	22	0	-	0	0	.
chr16	316991	316992	chr16:316992:G:A	rs553689304	G	A	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr16	325899	325900	chr16:325900:A:G	rs9925273	A	G	g	Sox2_MA0143.3	-7	0	-	0	0	.
chr16	379104	379105	chr16:379105:C:G	rs193146955	C	G	C	Sox2_MA0143.3	8	0	-	0	0	.
chr16	379128	379129	chr16:379129:C:T	rs11648403	C	T	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr16	397365	397366	chr16:397366:C:T	rs150899971	C	T	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr16	399933	399934	chr16:399934:T:C	rs11863625	T	C	T	Sox2_MA0143.3	15	0	+	0	0	.
chr16	411696	411697	chr16:411697:C:T	rs4984667	C	T	C	Sox2_MA0143.3	23	0	+	0	0	.
chr16	425951	425952	chr16:425952:C:T	rs578216225	C	T	-	Sox2_MA0143.3	-7	0	+	0	0	.
chr16	483464	483465	chr16:483465:C:G	rs7191283	C	G	C	Sox2_MA0143.3	5	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr16	497457	497458	chr16:497458:T:C	rs8052313	T	C	t	Sox2_MA0143.3	4	1	+	8.864090315184848	1.9553355358696274	CCTTTGTG
chr16	605261	605262	chr16:605262:T:G	rs4984902	T	G	T	Sox2_MA0143.3	8	0	+	0	0	.
chr16	632249	632250	chr16:632250:C:T	rs2269558	C	T	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr16	645286	645287	chr16:645287:T:C	rs1810458	T	C	C	Sox2_MA0143.3	27	0	+	0	0	.
chr16	645697	645698	chr16:645698:C:T	rs72767895	C	T	c	Sox2_MA0143.3	20	0	-	0	0	.
chr16	685793	685794	chr16:685794:A:G	rs11640115	A	G	A	Sox2_MA0143.3	3	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr16	731361	731362	chr16:731362:G:A	rs74502802	G	A	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr16	737737	737738	chr16:737738:G:C	rs12597563	G	C	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr16	766463	766464	chr16:766464:A:G	rs73491255	A	G	A	Sox2_MA0143.3	7	1	-	9.800647049772198	9.206767037375712	CCTTTGTT
chr16	797206	797207	chr16:797207:T:G	rs34969047	T	G	G	Sox2_MA0143.3	6	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr16	893533	893534	chr16:893534:C:A	rs4984708	C	A	C	Sox2_MA0143.3	-5	0	-	0	0	.
chr16	914059	914060	chr16:914060:G:A	rs73497289	G	A	G	Sox2_MA0143.3	16	0	+	0	0	.
chr16	927861	927862	chr16:927862:C:T	rs73499246	C	T	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr16	933291	933292	chr16:933292:C:T	rs6600236	C	T	C	Sox2_MA0143.3	12	0	+	0	0	.
chr16	970935	970936	chr16:970936:C:A	rs957845435	C	A	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr16	974784	974785	chr16:974785:C:T	rs79840158	C	T	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr16	974815	974816	chr16:974816:G:A	rs115171725	G	A	G	Sox2_MA0143.3	18	0	+	0	0	.
chr16	991088	991089	chr16:991089:G:A	rs900303780	G	A	G	Sox2_MA0143.3	19	0	+	0	0	.
chr16	1049026	1049027	chr16:1049027:C:T	rs116187390	C	T	C	Sox2_MA0143.3	21	0	-	0	0	.
chr16	1049047	1049048	chr16:1049048:G:C	rs113865727	G	C	G	Sox2_MA0143.3	0	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr16	1055603	1055604	chr16:1055604:A:G	rs4989482	A	G	G	Sox2_MA0143.3	3	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr16	1071433	1071434	chr16:1071434:C:A	rs579797	C	A	A	Sox2_MA0143.3	17	0	-	0	0	.
chr16	1074273	1074274	chr16:1074274:A:T	rs618976	A	T	t	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr16	1105244	1105245	chr16:1105245:C:T	rs117191176	C	T	C	Sox2_MA0143.3	23	0	+	0	0	.
chr16	1146631	1146632	chr16:1146632:C:T	rs60425066	C	T	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr16	1161244	1161245	chr16:1161245:C:T	rs72775426	C	T	C	Sox2_MA0143.3	14	0	+	0	0	.
chr16	1318515	1318516	chr16:1318516:C:T	rs8062227	C	T	c	Sox2_MA0143.3	24	0	+	0	0	.
chr16	1323591	1323592	chr16:1323592:G:T	rs11248868	G	T	N	Sox2_MA0143.3	16	0	+	0	0	.
chr16	1326890	1326891	chr16:1326891:C:T	rs1061621	C	T	c	Sox2_MA0143.3	-6	0	+	0	0	.
chr16	1409332	1409333	chr16:1409333:T:C	rs113426248	T	C	T	Sox2_MA0143.3	-19	0	+	0	0	.
chr16	1436145	1436146	chr16:1436146:G:A	rs77434805	G	A	G	Sox2_MA0143.3	10	0	-	0	0	.
chr16	1485867	1485868	chr16:1485868:G:A	rs116372477	G	A	G	Sox2_MA0143.3	21	0	+	0	0	.
chr16	1491459	1491460	chr16:1491460:C:T	rs2745106	C	T	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr16	1551765	1551766	chr16:1551766:T:C	rs2281230	T	C	T	Sox2_MA0143.3	-16	0	-	0	0	.
chr16	1613718	1613719	chr16:1613719:C:T	chr16:1613719:C:T	C	T	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr16	1637703	1637704	chr16:1637704:A:G	rs17135453	A	G	A	Sox2_MA0143.3	9	0	-	0	0	.
chr16	1681304	1681305	chr16:1681305:G:T	rs2235488	G	T	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr16	1707616	1707617	chr16:1707617:A:G	rs11860440	A	G	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr16	1758112	1758113	chr16:1758113:T:C	rs766323687	T	C	T	Sox2_MA0143.3	15	0	+	0	0	.
chr16	1820131	1820132	chr16:1820132:G:A	rs55786131	G	A	G	Sox2_MA0143.3	26	0	-	0	0	.
chr16	1820145	1820146	chr16:1820146:C:G	rs56309238	C	G	G	Sox2_MA0143.3	12	0	-	0	0	.
chr16	1827270	1827271	chr16:1827271:G:A	rs150059885	G	A	G	Sox2_MA0143.3	17	0	+	0	0	.
chr16	1854543	1854544	chr16:1854544:T:G	rs11643972	T	G	G	Sox2_MA0143.3	3	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr16	1854554	1854555	chr16:1854555:T:C	rs11643973	T	C	C	Sox2_MA0143.3	14	0	+	0	0	.
chr16	1922893	1922894	chr16:1922894:T:G	rs1742403	T	G	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr16	1941012	1941013	chr16:1941013:G:A	rs111845910	G	A	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr16	1985413	1985414	chr16:1985414:G:C	rs2072684	G	C	C	Sox2_MA0143.3	16	0	+	0	0	.
chr16	2015860	2015861	chr16:2015861:C:T	rs72633263	C	T	C	Sox2_MA0143.3	1	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr16	2015876	2015877	chr16:2015877:T:C	rs4786978	T	C	C	Sox2_MA0143.3	17	0	+	0	0	.
chr16	2092081	2092082	chr16:2092082:C:G	rs201509188	C	G	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr16	2140691	2140692	chr16:2140692:G:C	rs258280	G	C	C	Sox2_MA0143.3	0	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr16	2143569	2143570	chr16:2143570:G:A	chr16:2143570:G:A	G	A	G	Sox2_MA0143.3	7	1	-	9.206767037375712	9.800647049772198	CCTTTGTC
chr16	2226662	2226663	chr16:2226663:T:C	rs30985	T	C	C	Sox2_MA0143.3	16	0	+	0	0	.
chr16	2323925	2323926	chr16:2323926:T:A	rs45466895	T	A	A	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr16	2679932	2679933	chr16:2679933:G:C	rs112436312	G	C	N	Sox2_MA0143.3	-19	0	-	0	0	.
chr16	2690839	2690840	chr16:2690840:A:G	rs11644881	A	G	N	Sox2_MA0143.3	11	0	+	0	0	.
chr16	2771761	2771762	chr16:2771762:C:G	rs1058855	C	G	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr16	2835922	2835923	chr16:2835923:C:G	rs8046328	C	G	G	Sox2_MA0143.3	7	1	+	9.019595766176417	8.676919043985553	CCATTGTC
chr16	2915517	2915518	chr16:2915518:A:G	rs8054735	A	G	A	Sox2_MA0143.3	-15	0	+	0	0	.
chr16	2962744	2962745	chr16:2962745:T:C	rs757275	T	C	C	Sox2_MA0143.3	6	1	+	8.676919043985553	1.7681642646703326	CCATTGTG
chr16	3065270	3065271	chr16:3065271:T:C	rs45499297	T	C	t	Sox2_MA0143.3	14	0	+	0	0	.
chr16	3160353	3160354	chr16:3160354:C:G	rs373447889	C	G	C	Sox2_MA0143.3	10	0	-	0	0	.
chr16	3189814	3189815	chr16:3189815:T:C	rs2238391	T	C	T	Sox2_MA0143.3	-1	0	-	0	0	.
chr16	3226776	3226777	chr16:3226777:T:C	rs750724293	T	C	T	Sox2_MA0143.3	19	0	-	0	0	.
chr16	3285832	3285833	chr16:3285833:A:G	rs74003348	A	G	A	Sox2_MA0143.3	-4	0	+	0	0	.
chr16	3373647	3373648	chr16:3373648:T:G	rs37800	T	G	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr16	3456774	3456775	chr16:3456775:G:A	rs12448488	G	A	A	Sox2_MA0143.3	-14	0	-	0	0	.
chr16	3459664	3459665	chr16:3459665:T:G	rs39730	T	G	t	Sox2_MA0143.3	20	0	-	0	0	.
chr16	3464840	3464841	chr16:3464841:G:A	rs40447	G	A	A	Sox2_MA0143.3	12	0	-	0	0	.
chr16	3473001	3473002	chr16:3473002:C:T	rs250633	C	T	T	Sox2_MA0143.3	12	0	+	0	0	.
chr16	3547074	3547075	chr16:3547075:C:T	rs79766268	C	T	C	Sox2_MA0143.3	27	0	-	0	0	.
chr16	3579022	3579023	chr16:3579023:G:A	rs538909229	G	A	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr16	3656744	3656745	chr16:3656745:G:A	rs139615062	G	A	G	Sox2_MA0143.3	21	0	+	0	0	.
chr16	3761990	3761991	chr16:3761991:T:C	rs74424240	T	C	T	Sox2_MA0143.3	-12	0	-	0	0	.
chr16	3764020	3764021	chr16:3764021:A:G	rs111592811	A	G	A	Sox2_MA0143.3	6	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr16	3820195	3820196	chr16:3820196:C:A	rs1006605549	C	A	C	Sox2_MA0143.3	1	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr16	3820203	3820204	chr16:3820204:G:T	rs368488283	G	T	G	Sox2_MA0143.3	9	0	+	0	0	.
chr16	3823640	3823641	chr16:3823641:A:C	rs1296720	A	C	A	Sox2_MA0143.3	4	1	-	8.864090315184848	1.9553355358696274	CCTTTGTG
chr16	4012624	4012625	chr16:4012625:C:G	rs72762775	C	G	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr16	4053518	4053519	chr16:4053519:G:T	rs114722199	G	T	G	Sox2_MA0143.3	23	0	-	0	0	.
chr16	4215398	4215399	chr16:4215399:T:C	rs62037571	T	C	T	Sox2_MA0143.3	21	0	-	0	0	.
chr16	4273121	4273122	chr16:4273122:C:T	rs1053392415	C	T	c	Sox2_MA0143.3	-15	0	-	0	0	.
chr16	4284060	4284061	chr16:4284061:A:G	rs115115085	A	G	A	Sox2_MA0143.3	17	0	+	0	0	.
chr16	4318609	4318610	chr16:4318610:C:T	rs772293209	C	T	C	Sox2_MA0143.3	16	0	-	0	0	.
chr16	4327654	4327655	chr16:4327655:A:G	rs13337483	A	G	G	Sox2_MA0143.3	14	0	+	0	0	.
chr16	4345077	4345078	chr16:4345078:G:A	rs150686642	G	A	G	Sox2_MA0143.3	27	0	-	0	0	.
chr16	4358265	4358266	chr16:4358266:A:G	rs12448148	A	G	A	Sox2_MA0143.3	4	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr16	4359094	4359095	chr16:4359095:T:C	rs76494979	T	C	T	Sox2_MA0143.3	14	0	-	0	0	.
chr16	4379206	4379207	chr16:4379207:G:A	rs997541543	G	A	G	Sox2_MA0143.3	16	0	-	0	0	.
chr16	4384196	4384197	chr16:4384197:T:C	rs758045	T	C	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr16	4452512	4452513	chr16:4452513:C:T	rs6500606	C	T	T	Sox2_MA0143.3	12	0	+	0	0	.
chr16	4474238	4474239	chr16:4474239:A:C	rs879715734	A	C	A	Sox2_MA0143.3	2	1	+	9.019595766176417	2.900948058900136	CCATTGTC
chr16	4488112	4488113	chr16:4488113:G:A	rs4238849	G	A	G	Sox2_MA0143.3	22	0	+	0	0	.
chr16	4516054	4516055	chr16:4516055:A:G	rs184669726	A	G	A	Sox2_MA0143.3	23	0	-	0	0	.
chr16	4534404	4534405	chr16:4534405:C:T	rs4786519	C	T	C	Sox2_MA0143.3	21	0	-	0	0	.
chr16	4651071	4651072	chr16:4651072:A:G	rs2011819	A	G	G	Sox2_MA0143.3	23	0	-	0	0	.
chr16	4673901	4673902	chr16:4673902:C:T	rs112391144	C	T	C	Sox2_MA0143.3	10	0	-	0	0	.
chr16	4743656	4743657	chr16:4743657:T:C	rs2305657	T	C	C	Sox2_MA0143.3	18	0	-	0	0	.
chr16	4798994	4798995	chr16:4798995:T:C	rs56196587	T	C	C	Sox2_MA0143.3	-5	0	-	0	0	.
chr16	4845593	4845594	chr16:4845594:G:C	rs549776723	G	C	G	Sox2_MA0143.3	12	0	-	0	0	.
chr16	4859621	4859622	chr16:4859622:A:G	rs17770918	A	G	A	Sox2_MA0143.3	10	0	-	0	0	.
chr16	4859630	4859631	chr16:4859631:G:C	rs7184401	G	C	G	Sox2_MA0143.3	1	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr16	4859639	4859640	chr16:4859640:C:T	rs7185773	C	T	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr16	4866874	4866875	chr16:4866875:T:G	rs17771215	T	G	T	Sox2_MA0143.3	2	1	-	9.019595766176417	2.900948058900136	CCATTGTC
chr16	4882996	4882997	chr16:4882997:T:C	rs74003535	T	C	T	Sox2_MA0143.3	24	0	+	0	0	.
chr16	4904710	4904711	chr16:4904711:A:T	rs62036153	A	T	A	Sox2_MA0143.3	10	0	-	0	0	.
chr16	4948405	4948406	chr16:4948406:T:C	rs9940283	T	C	T	Sox2_MA0143.3	20	0	-	0	0	.
chr16	4948415	4948416	chr16:4948416:T:C	rs2908656	T	C	T	Sox2_MA0143.3	10	0	-	0	0	.
chr16	4995489	4995490	chr16:4995490:G:A	rs2972268	G	A	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr16	4995551	4995552	chr16:4995552:T:C	rs2972269	T	C	C	Sox2_MA0143.3	13	0	+	0	0	.
chr16	5030889	5030890	chr16:5030890:G:A	rs34742205	G	A	G	Sox2_MA0143.3	5	1	+	9.206767037375712	2.298012258060492	CCTTTGTC
chr16	5090909	5090910	chr16:5090910:G:A	rs148344593	G	A	G	Sox2_MA0143.3	8	0	+	0	0	.
chr16	5147235	5147236	chr16:5147236:C:A	rs4786004	C	A	C	Sox2_MA0143.3	1	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr16	5194273	5194274	chr16:5194274:C:T	rs7206605	C	T	C	Sox2_MA0143.3	15	0	-	0	0	.
chr16	5194274	5194275	chr16:5194275:A:G	rs7184446	A	G	A	Sox2_MA0143.3	14	0	-	0	0	.
chr16	5206570	5206571	chr16:5206571:A:G	rs79452806	A	G	A	Sox2_MA0143.3	3	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr16	5225569	5225570	chr16:5225570:A:G	rs11859463	A	G	G	Sox2_MA0143.3	24	0	-	0	0	.
chr16	5528222	5528223	chr16:5528223:A:G	rs2342434	A	G	A	Sox2_MA0143.3	-3	0	+	0	0	.
chr16	5541529	5541530	chr16:5541530:C:G	rs1825686	C	G	C	Sox2_MA0143.3	5	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr16	5573311	5573312	chr16:5573312:A:G	rs7200301	A	G	A	Sox2_MA0143.3	4	1	-	8.864090315184848	1.9553355358696274	CCTTTGTG
chr16	5580571	5580572	chr16:5580572:T:C	rs1039178249	T	C	T	Sox2_MA0143.3	-17	0	+	0	0	.
chr16	5580592	5580593	chr16:5580593:T:C	rs76887986	T	C	T	Sox2_MA0143.3	4	1	+	8.864090315184848	1.9553355358696274	CCTTTGTG
chr16	5865653	5865654	chr16:5865654:T:C	chr16:5865654:T:C	T	C	T	Sox2_MA0143.3	-12	0	+	0	0	.
chr16	5867204	5867205	chr16:5867205:C:T	rs9922403	C	T	C	Sox2_MA0143.3	17	0	+	0	0	.
chr16	5974121	5974122	chr16:5974122:A:G	rs887268	A	G	A	Sox2_MA0143.3	-8	0	+	0	0	.
chr16	6032928	6032929	chr16:6032929:A:G	rs12932768	A	G	A	Sox2_MA0143.3	17	0	+	0	0	.
chr16	6048293	6048294	chr16:6048294:A:G	rs12928867	A	G	A	Sox2_MA0143.3	26	0	+	0	0	.
chr16	6058009	6058010	chr16:6058010:C:T	rs72772827	C	T	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr16	6068416	6068417	chr16:6068417:T:C	rs9936231	T	C	C	Sox2_MA0143.3	-20	0	-	0	0	.
chr16	6081786	6081787	chr16:6081787:T:A	rs8052082	T	A	A	Sox2_MA0143.3	-11	0	+	0	0	.
chr16	6122771	6122772	chr16:6122772:G:A	rs4786084	G	A	A	Sox2_MA0143.3	27	0	+	0	0	.
chr16	6132334	6132335	chr16:6132335:C:A	rs62015666	C	A	C	Sox2_MA0143.3	9	0	+	0	0	.
chr16	6160981	6160982	chr16:6160982:C:T	rs12920365	C	T	T	Sox2_MA0143.3	13	0	-	0	0	.
chr16	6193944	6193945	chr16:6193945:C:T	rs117674363	C	T	c	Sox2_MA0143.3	-14	0	+	0	0	.
chr16	6251116	6251117	chr16:6251117:T:C	rs17139685	T	C	C	Sox2_MA0143.3	20	0	+	0	0	.
chr16	6398729	6398730	chr16:6398730:T:C	rs62016246	T	C	C	Sox2_MA0143.3	21	0	+	0	0	.
chr16	6407840	6407841	chr16:6407841:G:C	rs12921216	G	C	G	Sox2_MA0143.3	-11	0	+	0	0	.
chr16	6481427	6481428	chr16:6481428:C:T	rs878012	C	T	C	Sox2_MA0143.3	11	0	-	0	0	.
chr16	6485101	6485102	chr16:6485102:G:T	rs62016815	G	T	G	Sox2_MA0143.3	27	0	+	0	0	.
chr16	6499158	6499159	chr16:6499159:C:A	rs12445385	C	A	C	Sox2_MA0143.3	26	0	+	0	0	.
chr16	6499887	6499888	chr16:6499888:G:C	rs17442167	G	C	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr16	6663672	6663673	chr16:6663673:T:C	rs8057978	T	C	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr16	6663678	6663679	chr16:6663679:A:G	rs12926459	A	G	A	Sox2_MA0143.3	-4	0	+	0	0	.
chr16	6663678	6663679	chr16:6663679:A:T	chr16:6663679:A:T	A	T	A	Sox2_MA0143.3	-4	0	+	0	0	.
chr16	6663707	6663708	chr16:6663708:T:C	rs12325531	T	C	C	Sox2_MA0143.3	25	0	+	0	0	.
chr16	6686656	6686657	chr16:6686657:A:T	rs12325269	A	T	A	Sox2_MA0143.3	10	0	-	0	0	.
chr16	6853158	6853159	chr16:6853159:C:G	rs56081887	C	G	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr16	6891575	6891576	chr16:6891576:A:G	rs117032834	A	G	A	Sox2_MA0143.3	-20	0	+	0	0	.
chr16	6891616	6891617	chr16:6891617:G:C	chr16:6891617:G:C	G	C	G	Sox2_MA0143.3	21	0	+	0	0	.
chr16	6917914	6917915	chr16:6917915:A:G	rs72772242	A	G	A	Sox2_MA0143.3	-11	0	-	0	0	.
chr16	6928315	6928316	chr16:6928316:C:G	rs6500879	C	G	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr16	6964691	6964692	chr16:6964692:T:A	rs8058271	T	A	A	Sox2_MA0143.3	10	0	-	0	0	.
chr16	7052425	7052426	chr16:7052426:G:T	rs12920426	G	T	T	Sox2_MA0143.3	-15	0	-	0	0	.
chr16	7089090	7089091	chr16:7089091:T:C	rs11866738	T	C	T	Sox2_MA0143.3	-15	0	+	0	0	.
chr16	7147981	7147982	chr16:7147982:C:T	rs76054188	C	T	C	Sox2_MA0143.3	24	0	-	0	0	.
chr16	7209735	7209736	chr16:7209736:G:A	rs181072806	G	A	G	Sox2_MA0143.3	10	0	+	0	0	.
chr16	7219033	7219034	chr16:7219034:A:G	rs2141904	A	G	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr16	7219049	7219050	chr16:7219050:C:T	rs117114574	C	T	C	Sox2_MA0143.3	0	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr16	7219069	7219070	chr16:7219070:G:C	rs75981637	G	C	G	Sox2_MA0143.3	20	0	+	0	0	.
chr16	7306301	7306302	chr16:7306302:T:G	rs6500945	T	G	T	Sox2_MA0143.3	16	0	-	0	0	.
chr16	7310121	7310122	chr16:7310122:C:A	rs117186704	C	A	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr16	7310130	7310131	chr16:7310131:T:C	rs4479249	T	C	T	Sox2_MA0143.3	-20	0	-	0	0	.
chr16	7585403	7585404	chr16:7585404:G:A	rs1507007	G	A	G	Sox2_MA0143.3	-14	0	+	0	0	.
chr16	7706442	7706443	chr16:7706443:G:A	rs3785189	G	A	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr16	7750833	7750834	chr16:7750834:C:G	rs79022954	C	G	C	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr16	7851489	7851490	chr16:7851490:G:A	rs10852691	G	A	A	Sox2_MA0143.3	21	0	+	0	0	.
chr16	7964682	7964683	chr16:7964683:T:C	rs1395592	T	C	C	Sox2_MA0143.3	3	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr16	7992714	7992715	chr16:7992715:A:G	rs4787103	A	G	A	Sox2_MA0143.3	16	0	+	0	0	.
chr16	8072655	8072656	chr16:8072656:T:C	rs12920666	T	C	C	Sox2_MA0143.3	16	0	+	0	0	.
chr16	8130403	8130404	chr16:8130404:A:C	rs9930672	A	C	C	Sox2_MA0143.3	20	0	-	0	0	.
chr16	8229178	8229179	chr16:8229179:T:G	rs9928879	T	G	G	Sox2_MA0143.3	8	0	-	0	0	.
chr16	8229432	8229433	chr16:8229433:A:G	rs74005969	A	G	A	Sox2_MA0143.3	-13	0	+	0	0	.
chr16	8376744	8376745	chr16:8376745:G:C	rs4787192	G	C	G	Sox2_MA0143.3	25	0	+	0	0	.
chr16	8500609	8500610	chr16:8500610:T:G	rs55692205	T	G	G	Sox2_MA0143.3	20	0	-	0	0	.
chr16	8522928	8522929	chr16:8522929:T:C	rs967744501	T	C	T	Sox2_MA0143.3	-7	0	+	0	0	.
chr16	8547698	8547699	chr16:8547699:C:T	rs4786261	C	T	T	Sox2_MA0143.3	19	0	-	0	0	.
chr16	8547725	8547726	chr16:8547726:G:A	rs4787251	G	A	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr16	8552739	8552740	chr16:8552740:G:C	rs9928649	G	C	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr16	8559553	8559554	chr16:8559554:C:G	rs9635561	C	G	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr16	8620728	8620729	chr16:8620729:C:T	rs72766448	C	T	C	Sox2_MA0143.3	10	0	+	0	0	.
chr16	8668308	8668309	chr16:8668309:G:A	rs1641099	G	A	A	Sox2_MA0143.3	0	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr16	8675768	8675769	chr16:8675769:G:A	rs1730961	G	A	G	Sox2_MA0143.3	27	0	-	0	0	.
chr16	8675775	8675776	chr16:8675776:G:A	rs1730960	G	A	G	Sox2_MA0143.3	20	0	-	0	0	.
chr16	8678459	8678460	chr16:8678460:A:T	rs77068082	A	T	A	Sox2_MA0143.3	18	0	-	0	0	.
chr16	8736095	8736096	chr16:8736096:T:G	rs1731086	T	G	G	Sox2_MA0143.3	-16	0	-	0	0	.
chr16	8743983	8743984	chr16:8743984:G:T	rs1641007	G	T	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr16	8752270	8752271	chr16:8752271:T:A	rs9673401	T	A	T	Sox2_MA0143.3	-16	0	+	0	0	.
chr16	8755598	8755599	chr16:8755599:A:T	rs1273425	A	T	T	Sox2_MA0143.3	19	0	-	0	0	.
chr16	8792270	8792271	chr16:8792271:G:A	rs3743813	G	A	G	Sox2_MA0143.3	0	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr16	8828951	8828952	chr16:8828952:T:C	rs7196465	T	C	T	Sox2_MA0143.3	-15	0	+	0	0	.
chr16	8830788	8830789	chr16:8830789:G:C	rs8057390	G	C	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr16	8853178	8853179	chr16:8853179:T:C	rs1058967	T	C	C	Sox2_MA0143.3	18	0	-	0	0	.
chr16	8853413	8853414	chr16:8853414:C:T	rs146972299	C	T	C	Sox2_MA0143.3	13	0	-	0	0	.
chr16	8853424	8853425	chr16:8853425:T:C	rs1058927	T	C	T	Sox2_MA0143.3	2	1	-	9.613475778572903	3.494828071296623	CCATTGTT
chr16	8859458	8859459	chr16:8859459:T:C	rs146547878	T	C	T	Sox2_MA0143.3	3	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr16	8859466	8859467	chr16:8859467:T:A	rs78715761	T	A	T	Sox2_MA0143.3	11	0	+	0	0	.
chr16	8866459	8866460	chr16:8866460:G:C	rs77448541	G	C	G	Sox2_MA0143.3	18	0	+	0	0	.
chr16	8866467	8866468	chr16:8866468:G:A	rs138031402	G	A	G	Sox2_MA0143.3	26	0	+	0	0	.
chr16	8866642	8866643	chr16:8866643:C:T	rs77122936	C	T	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr16	8888457	8888458	chr16:8888458:A:T	rs1223027630	A	T	A	Sox2_MA0143.3	13	0	+	0	0	.
chr16	8964601	8964602	chr16:8964602:G:T	rs1600194	G	T	T	Sox2_MA0143.3	0	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr16	8964611	8964612	chr16:8964612:T:C	rs145975438	T	C	T	Sox2_MA0143.3	-10	0	-	0	0	.
chr16	9092600	9092601	chr16:9092601:G:A	rs1047011561	G	A	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr16	9093012	9093013	chr16:9093013:C:G	rs201780846	C	G	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr16	9152951	9152952	chr16:9152952:T:G	rs2941360	T	G	T	Sox2_MA0143.3	23	0	-	0	0	.
chr16	9152974	9152975	chr16:9152975:G:T	rs12929404	G	T	G	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr16	9185563	9185564	chr16:9185564:G:C	rs34519722	G	C	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr16	9188080	9188081	chr16:9188081:C:G	rs907027	C	G	C	Sox2_MA0143.3	7	1	+	9.206767037375712	8.864090315184848	CCTTTGTC
chr16	9192760	9192761	chr16:9192761:C:G	rs62031576	C	G	C	Sox2_MA0143.3	14	0	-	0	0	.
chr16	9236313	9236314	chr16:9236314:C:T	rs11640826	C	T	A	Sox2_MA0143.3	14	0	-	0	0	.
chr16	9244855	9244856	chr16:9244856:G:A	rs2965923	G	A	A	Sox2_MA0143.3	21	0	+	0	0	.
chr16	9258670	9258671	chr16:9258671:A:G	rs13339238	A	G	A	Sox2_MA0143.3	25	0	-	0	0	.
chr16	9258686	9258687	chr16:9258687:T:C	rs2941353	T	C	C	Sox2_MA0143.3	9	0	-	0	0	.
chr16	9258692	9258693	chr16:9258693:A:G	rs2965900	A	G	A	Sox2_MA0143.3	3	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr16	9393364	9393365	chr16:9393365:A:T	rs12444389	A	T	A	Sox2_MA0143.3	20	0	-	0	0	.
chr16	9403805	9403806	chr16:9403806:C:T	rs1975271	C	T	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr16	9422782	9422783	chr16:9422783:C:T	rs249277	C	T	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr16	9484396	9484397	chr16:9484397:A:G	rs4780443	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr16	9561999	9562000	chr16:9562000:A:G	rs8054142	A	G	A	Sox2_MA0143.3	14	0	+	0	0	.
chr16	9598428	9598429	chr16:9598429:C:T	rs118019061	C	T	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr16	9661040	9661041	chr16:9661041:C:A	rs7186415	C	A	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr16	9706639	9706640	chr16:9706640:T:A	rs4780573	T	A	T	Sox2_MA0143.3	16	0	+	0	0	.
chr16	9966937	9966938	chr16:9966938:T:A	rs7190175	T	A	A	Sox2_MA0143.3	-14	0	-	0	0	.
chr16	9972163	9972164	chr16:9972164:A:G	rs12932206	A	G	A	Sox2_MA0143.3	-19	0	-	0	0	.
chr16	10099164	10099165	chr16:10099165:G:A	rs56186846	G	A	A	Sox2_MA0143.3	10	0	-	0	0	.
chr16	10121556	10121557	chr16:10121557:A:G	rs2352756	A	G	A	Sox2_MA0143.3	3	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr16	10121562	10121563	chr16:10121563:T:C	rs2352757	T	C	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr16	10122032	10122033	chr16:10122033:C:G	rs35032885	C	G	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr16	10171512	10171513	chr16:10171513:A:C	rs1070505	A	C	A	Sox2_MA0143.3	24	0	-	0	0	.
chr16	10201153	10201154	chr16:10201154:C:T	rs17671830	C	T	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr16	10252654	10252655	chr16:10252655:G:C	rs6497829	G	C	G	Sox2_MA0143.3	-14	0	+	0	0	.
chr16	10258881	10258882	chr16:10258882:A:G	rs2162695	A	G	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr16	10313353	10313354	chr16:10313354:G:A	rs73504900	G	A	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr16	10313372	10313373	chr16:10313373:C:T	rs115310319	C	T	C	Sox2_MA0143.3	-20	0	-	0	0	.
chr16	10318835	10318836	chr16:10318836:C:A	rs10153121	C	A	C	Sox2_MA0143.3	20	0	-	0	0	.
chr16	10386969	10386970	chr16:10386970:G:C	rs148483466	G	C	G	Sox2_MA0143.3	9	0	-	0	0	.
chr16	10386988	10386989	chr16:10386989:T:C	rs7195621	T	C	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr16	10468515	10468516	chr16:10468516:G:T	rs117559300	G	T	G	Sox2_MA0143.3	18	0	+	0	0	.
chr16	10473063	10473064	chr16:10473064:G:C	rs2883308	G	C	G	Sox2_MA0143.3	25	0	-	0	0	.
chr16	10576956	10576957	chr16:10576957:C:T	rs183444755	C	T	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr16	10581159	10581160	chr16:10581160:C:A	rs148554121	C	A	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr16	10581196	10581197	chr16:10581197:T:G	rs539833449	T	G	T	Sox2_MA0143.3	18	0	+	0	0	.
chr16	10638461	10638462	chr16:10638462:T:C	rs7203029	T	C	T	Sox2_MA0143.3	-6	0	-	0	0	.
chr16	10668267	10668268	chr16:10668268:C:T	rs9927815	C	T	T	Sox2_MA0143.3	19	0	+	0	0	.
chr16	10668523	10668524	chr16:10668524:A:G	rs2541507	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr16	10668658	10668659	chr16:10668659:T:A	rs77060003	T	A	T	Sox2_MA0143.3	14	0	-	0	0	.
chr16	10746049	10746050	chr16:10746050:A:G	rs74594895	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr16	10746063	10746064	chr16:10746064:G:A	rs80245801	G	A	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr16	10746989	10746990	chr16:10746990:C:G	rs4780323	C	G	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr16	10755299	10755300	chr16:10755300:A:G	rs114446494	A	G	A	Sox2_MA0143.3	27	0	+	0	0	.
chr16	10788774	10788775	chr16:10788775:C:G	rs1830370	C	G	C	Sox2_MA0143.3	17	0	+	0	0	.
chr16	10941101	10941102	chr16:10941102:A:G	rs4781025	A	G	A	Sox2_MA0143.3	27	0	-	0	0	.
chr16	10981157	10981158	chr16:10981158:T:G	rs77753443	T	G	T	Sox2_MA0143.3	3	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr16	11076189	11076190	chr16:11076190:A:G	rs16958021	A	G	A	Sox2_MA0143.3	2	1	+	8.676919043985553	2.5582713367092715	CCATTGTG
chr16	11090386	11090387	chr16:11090387:T:C	rs79508981	T	C	T	Sox2_MA0143.3	-7	0	+	0	0	.
chr16	11100913	11100914	chr16:11100914:C:T	rs12927355	C	T	T	Sox2_MA0143.3	27	0	+	0	0	.
chr16	11114767	11114768	chr16:11114768:G:A	rs79936856	G	A	G	Sox2_MA0143.3	11	0	-	0	0	.
chr16	11147201	11147202	chr16:11147202:G:C	rs7186336	G	C	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr16	11194553	11194554	chr16:11194554:A:C	rs248842	A	C	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr16	11194570	11194571	chr16:11194571:T:G	rs248843	T	G	T	Sox2_MA0143.3	16	0	+	0	0	.
chr16	11234255	11234256	chr16:11234256:A:G	rs6498175	A	G	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr16	11268782	11268783	chr16:11268783:G:A	rs56069754	G	A	G	Sox2_MA0143.3	19	0	+	0	0	.
chr16	11286812	11286813	chr16:11286813:C:G	rs12922733	C	G	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr16	11320302	11320303	chr16:11320303:T:C	rs4315353	T	C	C	Sox2_MA0143.3	6	1	+	9.613475778572903	2.7047209992576837	CCATTGTT
chr16	11342132	11342133	chr16:11342133:T:C	rs6498184	T	C	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr16	11350015	11350016	chr16:11350016:G:T	rs36090551	G	T	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr16	11354176	11354177	chr16:11354177:C:T	rs537825139	C	T	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr16	11363347	11363348	chr16:11363348:A:C	rs74665161	A	C	A	Sox2_MA0143.3	-20	0	+	0	0	.
chr16	11367729	11367730	chr16:11367730:A:G	rs548031682	A	G	a	Sox2_MA0143.3	9	0	-	0	0	.
chr16	11384625	11384626	chr16:11384626:G:C	rs4325585	G	C	C	Sox2_MA0143.3	25	0	+	0	0	.
chr16	11389135	11389136	chr16:11389136:A:G	rs4447447	A	G	G	Sox2_MA0143.3	12	0	+	0	0	.
chr16	11391479	11391480	chr16:11391480:A:G	rs9927082	A	G	G	Sox2_MA0143.3	4	1	-	9.800647049772198	2.8918922704569785	CCTTTGTT
chr16	11391498	11391499	chr16:11391499:C:G	rs9936969	C	G	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr16	11392170	11392171	chr16:11392171:A:G	rs11862560	A	G	G	Sox2_MA0143.3	22	0	-	0	0	.
chr16	11392176	11392177	chr16:11392177:T:A	rs11644919	T	A	T	Sox2_MA0143.3	16	0	-	0	0	.
chr16	11392188	11392189	chr16:11392189:A:C	rs11862562	A	C	C	Sox2_MA0143.3	4	1	-	8.676919043985553	1.7681642646703322	CCATTGTG
chr16	11410573	11410574	chr16:11410574:C:A	rs7194272	C	A	C	Sox2_MA0143.3	20	0	-	0	0	.
chr16	11506606	11506607	chr16:11506607:C:A	rs8048362	C	A	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr16	11529418	11529419	chr16:11529419:G:C	rs72779121	G	C	G	Sox2_MA0143.3	24	0	+	0	0	.
chr16	11562383	11562384	chr16:11562384:C:T	rs141256629	C	T	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr16	11618610	11618611	chr16:11618611:C:G	rs2903972	C	G	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr16	11632470	11632471	chr16:11632471:G:C	rs145182458	G	C	g	Sox2_MA0143.3	-6	0	-	0	0	.
chr16	11635520	11635521	chr16:11635521:G:A	chr16:11635521:G:A	G	A	g	Sox2_MA0143.3	17	0	+	0	0	.
chr16	11651905	11651906	chr16:11651906:G:C	rs67188401	G	C	g	Sox2_MA0143.3	-5	0	-	0	0	.
chr16	11666268	11666269	chr16:11666269:C:A	rs117397656	C	A	C	Sox2_MA0143.3	8	0	-	0	0	.
chr16	11671551	11671552	chr16:11671552:A:G	rs8191285	A	G	G	Sox2_MA0143.3	6	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr16	11674857	11674858	chr16:11674858:C:T	rs8191315	C	T	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr16	11675117	11675118	chr16:11675118:C:A	rs8191319	C	A	C	Sox2_MA0143.3	25	0	-	0	0	.
chr16	11683367	11683368	chr16:11683368:C:T	rs16958548	C	T	C	Sox2_MA0143.3	1	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr16	11686772	11686773	chr16:11686773:G:T	rs8057398	G	T	T	Sox2_MA0143.3	20	0	+	0	0	.
chr16	11731255	11731256	chr16:11731256:A:G	rs1583001	A	G	G	Sox2_MA0143.3	8	0	-	0	0	.
chr16	11795202	11795203	chr16:11795203:T:C	rs8053548	T	C	T	Sox2_MA0143.3	6	1	+	8.676919043985553	1.7681642646703326	CCATTGTG
chr16	11826088	11826089	chr16:11826089:C:G	rs4429311	C	G	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr16	11826101	11826102	chr16:11826102:C:A	rs4493057	C	A	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr16	11867213	11867214	chr16:11867214:C:G	rs142248558	C	G	c	Sox2_MA0143.3	22	0	+	0	0	.
chr16	11914655	11914656	chr16:11914656:G:A	rs33621	G	A	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr16	11941702	11941703	chr16:11941703:C:T	rs575253429	C	T	C	Sox2_MA0143.3	19	0	-	0	0	.
chr16	12035996	12035997	chr16:12035997:C:T	rs192867992	C	T	C	Sox2_MA0143.3	1	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr16	12038817	12038818	chr16:12038818:A:C	rs2541582	A	C	A	Sox2_MA0143.3	14	0	-	0	0	.
chr16	12038823	12038824	chr16:12038824:C:T	rs146331686	C	T	c	Sox2_MA0143.3	8	0	-	0	0	.
chr16	12039613	12039614	chr16:12039614:A:G	rs2257492	A	G	G	Sox2_MA0143.3	10	0	+	0	0	.
chr16	12082262	12082263	chr16:12082263:C:T	rs9939383	C	T	C	Sox2_MA0143.3	12	0	+	0	0	.
chr16	12092291	12092292	chr16:12092292:A:G	rs74008678	A	G	G	Sox2_MA0143.3	22	0	-	0	0	.
chr16	12112312	12112313	chr16:12112313:C:T	rs7190611	C	T	C	Sox2_MA0143.3	23	0	-	0	0	.
chr16	12157824	12157825	chr16:12157825:G:C	rs59543877	G	C	G	Sox2_MA0143.3	5	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr16	12174540	12174541	chr16:12174541:C:T	rs9788917	C	T	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr16	12215717	12215718	chr16:12215718:C:A	rs12930378	C	A	A	Sox2_MA0143.3	-14	0	+	0	0	.
chr16	12232022	12232023	chr16:12232023:T:C	rs78226497	T	C	T	Sox2_MA0143.3	20	0	+	0	0	.
chr16	12311325	12311326	chr16:12311326:T:C	rs176717	T	C	T	Sox2_MA0143.3	-19	0	-	0	0	.
chr16	12344992	12344993	chr16:12344993:G:T	rs16959263	G	T	G	Sox2_MA0143.3	12	0	+	0	0	.
chr16	12362644	12362645	chr16:12362645:G:C	rs74008991	G	C	G	Sox2_MA0143.3	5	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr16	12385671	12385672	chr16:12385672:A:G	rs57062904	A	G	G	Sox2_MA0143.3	4	1	-	9.800647049772198	2.8918922704569785	CCTTTGTT
chr16	12470805	12470806	chr16:12470806:A:G	rs6498308	A	G	G	Sox2_MA0143.3	10	0	-	0	0	.
chr16	12502783	12502784	chr16:12502784:C:T	rs11075085	C	T	C	Sox2_MA0143.3	10	0	+	0	0	.
chr16	12502785	12502786	chr16:12502786:G:A	rs9927994	G	A	A	Sox2_MA0143.3	12	0	+	0	0	.
chr16	12545347	12545348	chr16:12545348:G:T	rs3830063	G	T	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr16	12560102	12560103	chr16:12560103:A:G	rs2042914	A	G	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr16	12577882	12577883	chr16:12577883:A:T	rs11644680	A	T	A	Sox2_MA0143.3	7	1	-	9.613475778572903	3.3675628303222993	CCATTGTT
chr16	12577888	12577889	chr16:12577889:G:A	rs11649393	G	A	G	Sox2_MA0143.3	1	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr16	12577906	12577907	chr16:12577907:A:C	rs11644685	A	C	A	Sox2_MA0143.3	-17	0	-	0	0	.
chr16	12583121	12583122	chr16:12583122:C:T	rs12929040	C	T	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr16	12583125	12583126	chr16:12583126:T:C	rs890903	T	C	T	Sox2_MA0143.3	-13	0	+	0	0	.
chr16	12584862	12584863	chr16:12584863:C:A	rs55779468	C	A	C	Sox2_MA0143.3	19	0	+	0	0	.
chr16	12591526	12591527	chr16:12591527:A:T	rs4781281	A	T	A	Sox2_MA0143.3	21	0	-	0	0	.
chr16	12592710	12592711	chr16:12592711:A:G	rs7198531	A	G	A	Sox2_MA0143.3	-13	0	-	0	0	.
chr16	12597795	12597796	chr16:12597796:C:T	rs4781292	C	T	T	Sox2_MA0143.3	-9	0	+	0	0	.
chr16	12617070	12617071	chr16:12617071:G:A	rs12708760	G	A	A	Sox2_MA0143.3	-4	0	-	0	0	.
chr16	12617076	12617077	chr16:12617077:G:C	rs12708761	G	C	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr16	12655743	12655744	chr16:12655744:C:A	rs74011931	C	A	A	Sox2_MA0143.3	-17	0	-	0	0	.
chr16	12677873	12677874	chr16:12677874:T:C	rs779668249	T	C	T	Sox2_MA0143.3	-12	0	+	0	0	.
chr16	12940674	12940675	chr16:12940675:A:G	rs74896783	A	G	A	Sox2_MA0143.3	-9	0	+	0	0	.
chr16	13031078	13031079	chr16:13031079:G:A	rs4780493	G	A	A	Sox2_MA0143.3	17	0	-	0	0	.
chr16	13098859	13098860	chr16:13098860:C:T	rs115086804	C	T	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr16	13479142	13479143	chr16:13479143:C:T	rs60853255	C	T	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr16	13492063	13492064	chr16:13492064:C:A	rs28501162	C	A	C	Sox2_MA0143.3	12	0	+	0	0	.
chr16	13522228	13522229	chr16:13522229:A:G	rs928962	A	G	a	Sox2_MA0143.3	2	1	+	8.676919043985553	2.5582713367092715	CCATTGTG
chr16	13782425	13782426	chr16:13782426:G:A	rs9921964	G	A	A	Sox2_MA0143.3	27	0	-	0	0	.
chr16	13910406	13910407	chr16:13910407:T:C	rs74009234	T	C	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr16	13946424	13946425	chr16:13946425:T:C	rs3136215	T	C	T	Sox2_MA0143.3	2	1	-	8.676919043985553	2.5582713367092715	CCATTGTG
chr16	14037075	14037076	chr16:14037076:C:G	rs12919705	C	G	C	Sox2_MA0143.3	22	0	+	0	0	.
chr16	14071019	14071020	chr16:14071020:A:C	chr16:14071020:A:C	A	C	G	Sox2_MA0143.3	11	0	+	0	0	.
chr16	14071970	14071971	chr16:14071971:A:G	rs576880172	A	G	A	Sox2_MA0143.3	-19	0	+	0	0	.
chr16	14364851	14364852	chr16:14364852:A:C	rs79669859	A	C	A	Sox2_MA0143.3	-10	0	-	0	0	.
chr16	14399493	14399494	chr16:14399494:C:T	rs117742719	C	T	C	Sox2_MA0143.3	-20	0	-	0	0	.
chr16	14427858	14427859	chr16:14427859:C:A	rs143495361	C	A	C	Sox2_MA0143.3	5	1	-	9.019595766176417	2.110840986861197	CCATTGTC
chr16	14445491	14445492	chr16:14445492:G:A	rs16963746	G	A	G	Sox2_MA0143.3	0	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr16	14932722	14932723	chr16:14932723:G:A	rs1356172663	G	A	.	Sox2_MA0143.3	19	0	-	0	0	.
chr16	14964249	14964250	chr16:14964250:A:G	rs7189885	A	G	.	Sox2_MA0143.3	-13	0	+	0	0	.
chr16	14988137	14988138	chr16:14988138:G:A	rs71374758	G	A	G	Sox2_MA0143.3	23	0	-	0	0	.
chr16	15024353	15024354	chr16:15024354:T:C	rs7194585	T	C	.	Sox2_MA0143.3	8	0	+	0	0	.
chr16	15222784	15222785	chr16:15222785:A:C	rs4491524	A	C	.	Sox2_MA0143.3	23	0	-	0	0	.
chr16	15499915	15499916	chr16:15499916:A:T	rs153787	A	T	A	Sox2_MA0143.3	-12	0	-	0	0	.
chr16	15702118	15702119	chr16:15702119:G:T	rs34493374	G	T	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr16	15794478	15794479	chr16:15794479:T:C	rs6498576	T	C	C	Sox2_MA0143.3	11	0	-	0	0	.
chr16	15826644	15826645	chr16:15826645:C:T	rs7184472	C	T	c	Sox2_MA0143.3	13	0	-	0	0	.
chr16	15925906	15925907	chr16:15925907:C:G	rs6498587	C	G	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr16	15996943	15996944	chr16:15996944:G:T	rs17579503	G	T	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr16	16001768	16001769	chr16:16001769:A:C	rs16967173	A	C	A	Sox2_MA0143.3	-8	0	+	0	0	.
chr16	16001779	16001780	chr16:16001780:T:G	rs4781708	T	G	T	Sox2_MA0143.3	3	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr16	16012318	16012319	chr16:16012319:C:T	rs62029842	C	T	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr16	16015036	16015037	chr16:16015037:G:A	rs1967120	G	A	A	Sox2_MA0143.3	-6	0	+	0	0	.
chr16	16118659	16118660	chr16:16118660:A:G	rs4148376	A	G	a	Sox2_MA0143.3	9	0	-	0	0	.
chr16	16183803	16183804	chr16:16183804:G:A	rs73524048	G	A	A	Sox2_MA0143.3	0	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr16	16635518	16635519	chr16:16635519:C:T	rs28632106	C	T	-	Sox2_MA0143.3	11	0	+	0	0	.
chr16	16915808	16915809	chr16:16915809:G:T	rs4238653	G	T	T	Sox2_MA0143.3	23	0	+	0	0	.
chr16	16934200	16934201	chr16:16934201:A:G	rs7190989	A	G	A	Sox2_MA0143.3	-3	0	+	0	0	.
chr16	17038817	17038818	chr16:17038818:T:C	rs66949811	T	C	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr16	17038819	17038820	chr16:17038820:G:C	rs1342076896	G	C	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr16	17070395	17070396	chr16:17070396:C:G	rs150302113	C	G	C	Sox2_MA0143.3	12	0	-	0	0	.
chr16	17126701	17126702	chr16:17126702:T:A	rs9939115	T	A	T	Sox2_MA0143.3	18	0	+	0	0	.
chr16	17194357	17194358	chr16:17194358:C:G	rs561859246	C	G	c	Sox2_MA0143.3	20	0	-	0	0	.
chr16	17271729	17271730	chr16:17271730:G:C	chr16:17271730:G:C	G	C	G	Sox2_MA0143.3	26	0	+	0	0	.
chr16	17305103	17305104	chr16:17305104:T:C	rs144081221	T	C	T	Sox2_MA0143.3	12	0	-	0	0	.
chr16	17321928	17321929	chr16:17321929:G:A	rs9925059	G	A	A	Sox2_MA0143.3	18	0	-	0	0	.
chr16	17354877	17354878	chr16:17354878:A:G	rs113839139	A	G	A	Sox2_MA0143.3	-17	0	-	0	0	.
chr16	17377954	17377955	chr16:17377955:C:T	rs753072782	C	T	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr16	17481207	17481208	chr16:17481208:C:T	rs12923427	C	T	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr16	17562753	17562754	chr16:17562754:T:C	rs12446811	T	C	C	Sox2_MA0143.3	11	0	+	0	0	.
chr16	17574546	17574547	chr16:17574547:A:G	rs57430189	A	G	G	Sox2_MA0143.3	3	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr16	17633789	17633790	chr16:17633790:T:C	rs988322755	T	C	T	Sox2_MA0143.3	18	0	+	0	0	.
chr16	17747348	17747349	chr16:17747349:C:T	rs66489454	C	T	T	Sox2_MA0143.3	5	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr16	17748540	17748541	chr16:17748541:G:A	rs12598358	G	A	A	Sox2_MA0143.3	-4	0	-	0	0	.
chr16	17853544	17853545	chr16:17853545:C:T	rs73535589	C	T	C	Sox2_MA0143.3	13	0	+	0	0	.
chr16	17872560	17872561	chr16:17872561:T:C	rs60499301	T	C	T	Sox2_MA0143.3	19	0	+	0	0	.
chr16	17972785	17972786	chr16:17972786:C:T	rs142796465	C	T	C	Sox2_MA0143.3	1	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr16	18005060	18005061	chr16:18005061:G:A	rs28714685	G	A	G	Sox2_MA0143.3	22	0	-	0	0	.
chr16	18005073	18005074	chr16:18005074:G:A	rs28392742	G	A	G	Sox2_MA0143.3	9	0	-	0	0	.
chr16	18062655	18062656	chr16:18062656:C:T	rs2158152	C	T	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr16	18918206	18918207	chr16:18918207:G:C	rs35083749	G	C	-	Sox2_MA0143.3	-14	0	+	0	0	.
chr16	18989477	18989478	chr16:18989478:T:C	rs56052301	T	C	t	Sox2_MA0143.3	2	1	+	3.5547341015215945	-2.751084876953981	CCTTTGTA
chr16	18999417	18999418	chr16:18999418:C:G	rs4780774	C	G	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr16	19072226	19072227	chr16:19072227:C:T	rs9673167	C	T	C	Sox2_MA0143.3	18	0	+	0	0	.
chr16	19135860	19135861	chr16:19135861:G:A	rs56349873	G	A	G	Sox2_MA0143.3	10	0	+	0	0	.
chr16	19366490	19366491	chr16:19366491:G:A	rs7194009	G	A	G	Sox2_MA0143.3	16	0	+	0	0	.
chr16	19389380	19389381	chr16:19389381:G:T	rs1375448558	G	T	G	Sox2_MA0143.3	0	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr16	19389381	19389382	chr16:19389382:T:G	rs115130820	T	G	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr16	19389391	19389392	chr16:19389392:G:T	rs62023737	G	T	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr16	19396623	19396624	chr16:19396624:C:T	rs2105840	C	T	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr16	19396771	19396772	chr16:19396772:C:T	rs138921392	C	T	C	Sox2_MA0143.3	24	0	-	0	0	.
chr16	19396795	19396796	chr16:19396796:G:A	rs12597979	G	A	G	Sox2_MA0143.3	0	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr16	19475001	19475002	chr16:19475002:C:T	rs28687478	C	T	C	Sox2_MA0143.3	9	0	-	0	0	.
chr16	19590004	19590005	chr16:19590005:C:T	rs226866	C	T	T	Sox2_MA0143.3	26	0	-	0	0	.
chr16	19590044	19590045	chr16:19590045:G:A	rs11860182	G	A	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr16	19607628	19607629	chr16:19607629:T:C	rs226897	T	C	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr16	19653699	19653700	chr16:19653700:C:T	rs72767592	C	T	c	Sox2_MA0143.3	-17	0	+	0	0	.
chr16	19696178	19696179	chr16:19696179:C:T	rs116281589	C	T	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr16	19833346	19833347	chr16:19833347:G:A	rs1292636	G	A	A	Sox2_MA0143.3	-12	0	-	0	0	.
chr16	19847583	19847584	chr16:19847584:T:C	rs72769587	T	C	T	Sox2_MA0143.3	2	1	+	8.864090315184848	2.5582713367092715	CCTTTGTG
chr16	19917415	19917416	chr16:19917416:T:C	rs7190781	T	C	C	Sox2_MA0143.3	15	0	-	0	0	.
chr16	20325268	20325269	chr16:20325269:C:T	rs8046269	C	T	T	Sox2_MA0143.3	-15	0	+	0	0	.
chr16	20576384	20576385	chr16:20576385:G:A	rs77507530	G	A	-	Sox2_MA0143.3	13	0	-	0	0	.
chr16	20707616	20707617	chr16:20707617:G:A	rs3848252	G	A	g	Sox2_MA0143.3	-5	0	+	0	0	.
chr16	20747416	20747417	chr16:20747417:A:C	rs28718891	A	C	A	Sox2_MA0143.3	27	0	+	0	0	.
chr16	21101696	21101697	chr16:21101697:G:A	rs8047480	G	A	G	Sox2_MA0143.3	7	1	-	9.019595766176417	9.613475778572903	CCATTGTC
chr16	21134049	21134050	chr16:21134050:C:G	rs375278670	C	G	C	Sox2_MA0143.3	23	0	-	0	0	.
chr16	21245360	21245361	chr16:21245361:C:G	rs8062610	C	G	G	Sox2_MA0143.3	11	0	-	0	0	.
chr16	21280369	21280370	chr16:21280370:A:G	rs8060552	A	G	A	Sox2_MA0143.3	-11	0	+	0	0	.
chr16	21607837	21607838	chr16:21607838:A:G	rs76787767	A	G	A	Sox2_MA0143.3	21	0	+	0	0	.
chr16	21661387	21661388	chr16:21661388:A:T	rs142945684	A	T	A	Sox2_MA0143.3	13	0	-	0	0	.
chr16	21694690	21694691	chr16:21694691:T:C	rs215889	T	C	T	Sox2_MA0143.3	-9	0	-	0	0	.
chr16	21937566	21937567	chr16:21937567:A:T	chr16:21937567:A:T	A	T	.	Sox2_MA0143.3	26	0	+	0	0	.
chr16	22081225	22081226	chr16:22081226:A:G	rs62047199	A	G	G	Sox2_MA0143.3	16	0	+	0	0	.
chr16	22210128	22210129	chr16:22210129:C:T	rs183204894	C	T	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr16	22273378	22273379	chr16:22273379:T:G	rs9888860	T	G	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr16	22321466	22321467	chr16:22321467:T:G	chr16:22321467:T:G	T	G	T	Sox2_MA0143.3	-4	0	+	0	0	.
chr16	22623334	22623335	chr16:22623335:G:A	rs112119543	G	A	G	Sox2_MA0143.3	15	0	+	0	0	.
chr16	22670467	22670468	chr16:22670468:A:G	rs770298070	A	G	A	Sox2_MA0143.3	23	0	+	0	0	.
chr16	22840154	22840155	chr16:22840155:G:A	rs2238482	G	A	G	Sox2_MA0143.3	1	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr16	22859990	22859991	chr16:22859991:G:A	rs11641723	G	A	A	Sox2_MA0143.3	-19	0	+	0	0	.
chr16	22899949	22899950	chr16:22899950:A:G	rs985252	A	G	G	Sox2_MA0143.3	19	0	+	0	0	.
chr16	22951280	22951281	chr16:22951281:A:G	rs16974689	A	G	G	Sox2_MA0143.3	2	1	+	9.019595766176417	2.900948058900136	CCATTGTC
chr16	22967199	22967200	chr16:22967200:A:C	rs74990	A	C	C	Sox2_MA0143.3	24	0	+	0	0	.
chr16	23002823	23002824	chr16:23002824:A:G	rs12919262	A	G	A	Sox2_MA0143.3	16	0	-	0	0	.
chr16	23019938	23019939	chr16:23019939:A:G	rs8044188	A	G	G	Sox2_MA0143.3	13	0	-	0	0	.
chr16	23131951	23131952	chr16:23131952:C:T	rs79887012	C	T	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr16	23132554	23132555	chr16:23132555:A:G	rs2269738	A	G	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr16	23219471	23219472	chr16:23219472:C:G	rs9928041	C	G	C	Sox2_MA0143.3	21	0	-	0	0	.
chr16	23223619	23223620	chr16:23223620:C:G	rs7206022	C	G	C	Sox2_MA0143.3	13	0	+	0	0	.
chr16	23258970	23258971	chr16:23258971:C:T	rs9939129	C	T	C	Sox2_MA0143.3	20	0	-	0	0	.
chr16	23280122	23280123	chr16:23280123:T:C	rs2023667	T	C	C	Sox2_MA0143.3	-12	0	-	0	0	.
chr16	23280124	23280125	chr16:23280125:C:T	rs2023668	C	T	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr16	23495618	23495619	chr16:23495619:G:A	rs722069	G	A	G	Sox2_MA0143.3	16	0	-	0	0	.
chr16	23567812	23567813	chr16:23567813:A:G	rs75636406	A	G	A	Sox2_MA0143.3	2	1	+	9.613475778572903	3.494828071296623	CCATTGTT
chr16	23803772	23803773	chr16:23803773:C:A	rs76638370	C	A	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr16	23834474	23834475	chr16:23834475:C:T	rs3760106	C	T	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr16	23837245	23837246	chr16:23837246:A:C	rs890005157	A	C	A	Sox2_MA0143.3	-17	0	-	0	0	.
chr16	23934663	23934664	chr16:23934664:T:G	rs195989	T	G	G	Sox2_MA0143.3	25	0	+	0	0	.
chr16	23975382	23975383	chr16:23975383:C:T	rs117187685	C	T	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr16	24007541	24007542	chr16:24007542:A:G	rs4788423	A	G	A	Sox2_MA0143.3	-20	0	+	0	0	.
chr16	24118863	24118864	chr16:24118864:G:A	rs9937112	G	A	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr16	24152966	24152967	chr16:24152967:T:G	rs408882	T	G	T	Sox2_MA0143.3	10	0	+	0	0	.
chr16	24297786	24297787	chr16:24297787:T:C	rs1557809	T	C	T	Sox2_MA0143.3	-7	0	+	0	0	.
chr16	24306980	24306981	chr16:24306981:T:A	rs9926669	T	A	A	Sox2_MA0143.3	19	0	-	0	0	.
chr16	24309118	24309119	chr16:24309119:A:G	rs9921785	A	G	A	Sox2_MA0143.3	-1	0	+	0	0	.
chr16	24423965	24423966	chr16:24423966:C:T	rs2057709	C	T	C	Sox2_MA0143.3	-20	0	-	0	0	.
chr16	24485355	24485356	chr16:24485356:T:C	rs2560917	T	C	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr16	24576888	24576889	chr16:24576889:C:A	rs9933532	C	A	C	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr16	24812374	24812375	chr16:24812375:A:T	rs12597237	A	T	T	Sox2_MA0143.3	24	0	-	0	0	.
chr16	24991513	24991514	chr16:24991514:C:T	rs28497324	C	T	C	Sox2_MA0143.3	25	0	-	0	0	.
chr16	25014935	25014936	chr16:25014936:T:C	rs149621950	T	C	T	Sox2_MA0143.3	2	1	-	9.019595766176417	2.900948058900136	CCATTGTC
chr16	25014951	25014952	chr16:25014952:C:T	chr16:25014952:C:T	C	T	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr16	25031658	25031659	chr16:25031659:A:C	rs189265931	A	C	A	Sox2_MA0143.3	15	0	+	0	0	.
chr16	25031661	25031662	chr16:25031662:A:G	rs28591601	A	G	G	Sox2_MA0143.3	18	0	+	0	0	.
chr16	25092727	25092728	chr16:25092728:A:G	rs905910750	A	G	a	Sox2_MA0143.3	-7	0	+	0	0	.
chr16	25225507	25225508	chr16:25225508:G:A	rs1039416127	G	A	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr16	25694174	25694175	chr16:25694175:T:C	rs8045338	T	C	t	Sox2_MA0143.3	2	1	+	9.206767037375712	2.900948058900136	CCTTTGTC
chr16	25714315	25714316	chr16:25714316:C:G	rs142329036	C	G	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr16	25850752	25850753	chr16:25850753:A:G	rs67100199	A	G	A	Sox2_MA0143.3	8	0	-	0	0	.
chr16	26084952	26084953	chr16:26084953:T:C	rs28498170	T	C	C	Sox2_MA0143.3	16	0	+	0	0	.
chr16	26130497	26130498	chr16:26130498:G:A	rs4544246	G	A	A	Sox2_MA0143.3	15	0	-	0	0	.
chr16	26281684	26281685	chr16:26281685:A:C	rs1895551	A	C	A	Sox2_MA0143.3	-6	0	-	0	0	.
chr16	26497643	26497644	chr16:26497644:A:G	rs1423087	A	G	G	Sox2_MA0143.3	25	0	+	0	0	.
chr16	26663966	26663967	chr16:26663967:C:G	rs1557684	C	G	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr16	26698701	26698702	chr16:26698702:C:G	rs321450	C	G	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr16	26718025	26718026	chr16:26718026:T:C	rs117857928	T	C	T	Sox2_MA0143.3	-4	0	+	0	0	.
chr16	26842803	26842804	chr16:26842804:T:C	rs195867	T	C	T	Sox2_MA0143.3	8	0	+	0	0	.
chr16	26889224	26889225	chr16:26889225:T:G	rs9302446	T	G	T	Sox2_MA0143.3	-15	0	-	0	0	.
chr16	26905499	26905500	chr16:26905500:G:A	chr16:26905500:G:A	G	A	G	Sox2_MA0143.3	25	0	+	0	0	.
chr16	26996275	26996276	chr16:26996276:G:A	rs62029856	G	A	G	Sox2_MA0143.3	27	0	+	0	0	.
chr16	27021621	27021622	chr16:27021622:A:G	rs9936862	A	G	G	Sox2_MA0143.3	12	0	+	0	0	.
chr16	27032747	27032748	chr16:27032748:A:G	rs11074836	A	G	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr16	27155261	27155262	chr16:27155262:G:A	rs72796420	G	A	G	Sox2_MA0143.3	24	0	-	0	0	.
chr16	27236995	27236996	chr16:27236996:T:C	rs114307515	T	C	C	Sox2_MA0143.3	-5	0	-	0	0	.
chr16	27272358	27272359	chr16:27272359:G:A	rs889620765	G	A	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr16	27283926	27283927	chr16:27283927:G:C	rs572601731	G	C	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr16	27311521	27311522	chr16:27311522:C:T	rs117654266	C	T	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr16	27317796	27317797	chr16:27317797:G:A	rs7190969	G	A	A	Sox2_MA0143.3	19	0	+	0	0	.
chr16	27323248	27323249	chr16:27323249:A:G	rs142606947	A	G	A	Sox2_MA0143.3	12	0	-	0	0	.
chr16	27323280	27323281	chr16:27323281:C:T	rs566291178	C	T	C	Sox2_MA0143.3	-20	0	-	0	0	.
chr16	27403056	27403057	chr16:27403057:T:G	rs6498021	T	G	G	Sox2_MA0143.3	2	1	-	9.613475778572903	3.494828071296623	CCATTGTT
chr16	27422092	27422093	chr16:27422093:C:T	rs76678990	C	T	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr16	27445291	27445292	chr16:27445292:G:C	rs963154	G	C	C	Sox2_MA0143.3	26	0	+	0	0	.
chr16	27703264	27703265	chr16:27703265:G:C	rs734652	G	C	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr16	27787487	27787488	chr16:27787488:A:G	rs17706237	A	G	A	Sox2_MA0143.3	3	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr16	27816059	27816060	chr16:27816060:G:A	rs1363749	G	A	A	Sox2_MA0143.3	-13	0	+	0	0	.
chr16	27816686	27816687	chr16:27816687:G:A	rs4787994	G	A	G	Sox2_MA0143.3	25	0	-	0	0	.
chr16	27839805	27839806	chr16:27839806:T:C	rs1645347	T	C	T	Sox2_MA0143.3	12	0	-	0	0	.
chr16	28003087	28003088	chr16:28003088:A:G	rs12922026	A	G	G	Sox2_MA0143.3	6	1	-	9.019595766176417	2.110840986861197	CCATTGTC
chr16	28105630	28105631	chr16:28105631:A:G	rs205361	A	G	A	Sox2_MA0143.3	10	0	-	0	0	.
chr16	28125266	28125267	chr16:28125267:C:A	rs33045	C	A	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr16	28205352	28205353	chr16:28205353:T:C	rs9927626	T	C	T	Sox2_MA0143.3	3	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr16	28278363	28278364	chr16:28278364:C:A	rs149738934	C	A	C	Sox2_MA0143.3	15	0	+	0	0	.
chr16	28495106	28495107	chr16:28495107:C:T	rs151233	C	T	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr16	28519965	28519966	chr16:28519966:A:G	rs4787458	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr16	28527054	28527055	chr16:28527055:A:G	rs910490283	A	G	A	Sox2_MA0143.3	25	0	-	0	0	.
chr16	28609235	28609236	chr16:28609236:C:T	rs35837227	C	T	.	Sox2_MA0143.3	-1	0	+	0	0	.
chr16	28609250	28609251	chr16:28609251:C:T	rs750155	C	T	.	Sox2_MA0143.3	14	0	+	0	0	.
chr16	28614756	28614757	chr16:28614757:T:C	rs72483420	T	C	.	Sox2_MA0143.3	12	0	+	0	0	.
chr16	28846263	28846264	chr16:28846264:G:A	rs751421456	G	A	G	Sox2_MA0143.3	7	1	+	8.676919043985553	3.3675628303222993	CCATTGTG
chr16	28902704	28902705	chr16:28902705:G:A	rs41292394	G	A	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr16	28937682	28937683	chr16:28937683:G:A	chr16:28937683:G:A	G	A	G	Sox2_MA0143.3	-3	0	-	0	0	.
chr16	28974270	28974271	chr16:28974271:G:T	rs145807109	G	T	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr16	28990687	28990688	chr16:28990688:A:G	rs1802141	A	G	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr16	29121543	29121544	chr16:29121544:A:G	rs2252609	A	G	.	Sox2_MA0143.3	-4	0	+	0	0	.
chr16	29257021	29257022	chr16:29257022:A:G	rs35784751	A	G	N	Sox2_MA0143.3	9	0	-	0	0	.
chr16	29285399	29285400	chr16:29285400:G:C	rs11862473	G	C	.	Sox2_MA0143.3	15	0	+	0	0	.
chr16	29285439	29285440	chr16:29285440:C:A	rs193259947	C	A	.	Sox2_MA0143.3	0	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr16	29290645	29290646	chr16:29290646:A:G	rs76369024	A	G	.	Sox2_MA0143.3	22	0	+	0	0	.
chr16	29297659	29297660	chr16:29297660:T:C	rs7195442	T	C	.	Sox2_MA0143.3	-14	0	-	0	0	.
chr16	29297663	29297664	chr16:29297664:G:T	rs7185580	G	T	.	Sox2_MA0143.3	-18	0	-	0	0	.
chr16	29307297	29307298	chr16:29307298:G:A	rs871887	G	A	.	Sox2_MA0143.3	-16	0	+	0	0	.
chr16	29317085	29317086	chr16:29317086:G:A	rs189182462	G	A	.	Sox2_MA0143.3	-12	0	+	0	0	.
chr16	29317108	29317109	chr16:29317109:A:G	rs749809	A	G	.	Sox2_MA0143.3	11	0	+	0	0	.
chr16	29321804	29321805	chr16:29321805:A:C	rs114464874	A	C	.	Sox2_MA0143.3	-3	0	+	0	0	.
chr16	29679717	29679718	chr16:29679718:G:C	rs185546402	G	C	.	Sox2_MA0143.3	1	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr16	29807988	29807989	chr16:29807989:C:T	rs754007157	C	T	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr16	29822626	29822627	chr16:29822627:T:C	rs910806311	T	C	t	Sox2_MA0143.3	12	0	-	0	0	.
chr16	29848563	29848564	chr16:29848564:C:T	rs1559414	C	T	c	Sox2_MA0143.3	26	0	-	0	0	.
chr16	29892070	29892071	chr16:29892071:T:C	rs74017645	T	C	T	Sox2_MA0143.3	-5	0	-	0	0	.
chr16	29976198	29976199	chr16:29976199:A:T	rs114091285	A	T	A	Sox2_MA0143.3	-10	0	+	0	0	.
chr16	30122056	30122057	chr16:30122057:C:T	rs139021825	C	T	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr16	30308985	30308986	chr16:30308986:G:T	rs4471699	G	T	.	Sox2_MA0143.3	-20	0	+	0	0	.
chr16	30355442	30355443	chr16:30355443:G:A	rs79312082	G	A	G	Sox2_MA0143.3	11	0	-	0	0	.
chr16	30355444	30355445	chr16:30355445:A:C	rs539166813	A	C	A	Sox2_MA0143.3	9	0	-	0	0	.
chr16	30383604	30383605	chr16:30383605:G:A	rs117267704	G	A	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr16	30490287	30490288	chr16:30490288:C:T	rs34499019	C	T	c	Sox2_MA0143.3	-11	0	+	0	0	.
chr16	30585270	30585271	chr16:30585271:G:T	rs145414236	G	T	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr16	30651347	30651348	chr16:30651348:G:A	chr16:30651348:G:A	G	A	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr16	30713830	30713831	chr16:30713831:G:A	rs80323213	G	A	G	Sox2_MA0143.3	5	1	+	9.206767037375712	2.298012258060492	CCTTTGTC
chr16	30875460	30875461	chr16:30875461:C:T	rs111799366	C	T	C	Sox2_MA0143.3	1	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr16	30875466	30875467	chr16:30875467:C:T	rs1003029117	C	T	C	Sox2_MA0143.3	7	1	+	9.206767037375712	9.800647049772198	CCTTTGTC
chr16	30922054	30922055	chr16:30922055:C:T	rs189601154	C	T	C	Sox2_MA0143.3	8	0	+	0	0	.
chr16	30922753	30922754	chr16:30922754:G:A	rs3813020	G	A	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr16	30923102	30923103	chr16:30923103:G:A	rs781444708	G	A	G	Sox2_MA0143.3	14	0	+	0	0	.
chr16	31073262	31073263	chr16:31073263:A:G	rs182435006	A	G	A	Sox2_MA0143.3	-9	0	-	0	0	.
chr16	31090999	31091000	chr16:31091000:C:T	rs7294	C	T	C	Sox2_MA0143.3	13	0	+	0	0	.
chr16	31147325	31147326	chr16:31147326:C:T	rs28385574	C	T	C	Sox2_MA0143.3	1	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr16	31349570	31349571	chr16:31349571:A:G	rs56392848	A	G	g	Sox2_MA0143.3	8	0	+	0	0	.
chr16	31386320	31386321	chr16:31386321:T:C	rs17839495	T	C	T	Sox2_MA0143.3	-16	0	+	0	0	.
chr16	31510686	31510687	chr16:31510687:C:G	rs35884660	C	G	c	Sox2_MA0143.3	9	0	-	0	0	.
chr16	31695842	31695843	chr16:31695843:T:C	rs933334756	T	C	t	Sox2_MA0143.3	27	0	-	0	0	.
chr16	31696918	31696919	chr16:31696919:A:T	rs2157970	A	T	t	Sox2_MA0143.3	25	0	-	0	0	.
chr16	31713238	31713239	chr16:31713239:C:A	chr16:31713239:C:A	C	A	c	Sox2_MA0143.3	-20	0	+	0	0	.
chr16	31713264	31713265	chr16:31713265:T:A	chr16:31713265:T:A	T	A	t	Sox2_MA0143.3	6	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr16	31869660	31869661	chr16:31869661:A:C	chr16:31869661:A:C	A	C	.	Sox2_MA0143.3	12	0	-	0	0	.
chr16	31869676	31869677	chr16:31869677:T:G	chr16:31869677:T:G	T	G	.	Sox2_MA0143.3	-4	0	-	0	0	.
chr16	33734835	33734836	chr16:33734836:T:C	rs10153068	T	C	.	Sox2_MA0143.3	23	0	+	0	0	.
chr16	34149069	34149070	chr16:34149070:C:T	rs6607270	C	T	.	Sox2_MA0143.3	-20	0	+	0	0	.
chr16	34277722	34277723	chr16:34277723:G:A	rs1033665550	G	A	.	Sox2_MA0143.3	10	0	+	0	0	.
chr16	35150204	35150205	chr16:35150205:T:G	rs79500347	T	G	.	Sox2_MA0143.3	6	1	+	8.676919043985553	1.7681642646703326	CCATTGTG
chr16	35169938	35169939	chr16:35169939:G:T	rs117927739	G	T	.	Sox2_MA0143.3	-9	0	+	0	0	.
chr16	35195720	35195721	chr16:35195721:G:A	rs34732322	G	A	.	Sox2_MA0143.3	-4	0	-	0	0	.
chr16	35555999	35556000	chr16:35556000:A:G	rs11860567	A	G	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr16	35574337	35574338	chr16:35574338:C:T	rs750986192	C	T	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr16	35696604	35696605	chr16:35696605:A:T	rs11865836	A	T	t	Sox2_MA0143.3	-5	0	-	0	0	.
chr16	35739154	35739155	chr16:35739155:A:T	rs11862759	A	T	A	Sox2_MA0143.3	12	0	-	0	0	.
chr16	38267599	38267600	chr16:38267600:G:A	rs1299245628	G	A	.	Sox2_MA0143.3	24	0	-	0	0	.
chr16	46711449	46711450	chr16:46711450:G:T	rs559999886	G	T	G	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr16	46859001	46859002	chr16:46859002:G:T	rs7196375	G	T	G	Sox2_MA0143.3	25	0	+	0	0	.
chr16	47130199	47130200	chr16:47130200:C:T	rs150307191	C	T	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr16	48137092	48137093	chr16:48137093:G:C	rs193213955	G	C	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr16	48245180	48245181	chr16:48245181:C:G	rs60431412	C	G	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr16	48385045	48385046	chr16:48385046:G:A	rs191324932	G	A	G	Sox2_MA0143.3	24	0	-	0	0	.
chr16	48458660	48458661	chr16:48458661:T:C	rs111784002	T	C	.	Sox2_MA0143.3	6	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr16	48470452	48470453	chr16:48470453:G:T	rs2173715	G	T	.	Sox2_MA0143.3	-2	0	+	0	0	.
chr16	48523444	48523445	chr16:48523445:C:T	rs12443672	C	T	C	Sox2_MA0143.3	19	0	+	0	0	.
chr16	48559867	48559868	chr16:48559868:A:G	rs871902	A	G	A	Sox2_MA0143.3	20	0	-	0	0	.
chr16	48789779	48789780	chr16:48789780:G:A	rs10521178	G	A	G	Sox2_MA0143.3	9	0	-	0	0	.
chr16	48834057	48834058	chr16:48834058:G:C	rs17762140	G	C	G	Sox2_MA0143.3	16	0	-	0	0	.
chr16	48895060	48895061	chr16:48895061:T:G	rs2355648	T	G	G	Sox2_MA0143.3	14	0	-	0	0	.
chr16	48906330	48906331	chr16:48906331:A:G	rs114465532	A	G	A	Sox2_MA0143.3	10	0	-	0	0	.
chr16	48920324	48920325	chr16:48920325:G:T	rs74385671	G	T	G	Sox2_MA0143.3	23	0	+	0	0	.
chr16	48939455	48939456	chr16:48939456:C:A	rs8049034	C	A	C	Sox2_MA0143.3	8	0	+	0	0	.
chr16	49403222	49403223	chr16:49403223:T:G	rs111908586	T	G	T	Sox2_MA0143.3	-7	0	-	0	0	.
chr16	49439229	49439230	chr16:49439230:G:A	rs112203389	G	A	G	Sox2_MA0143.3	-3	0	-	0	0	.
chr16	49474079	49474080	chr16:49474080:G:C	rs7200635	G	C	c	Sox2_MA0143.3	-6	0	-	0	0	.
chr16	49510847	49510848	chr16:49510848:C:T	rs12924422	C	T	C	Sox2_MA0143.3	16	0	-	0	0	.
chr16	49510878	49510879	chr16:49510879:C:A	rs147652439	C	A	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr16	49531524	49531525	chr16:49531525:G:A	rs76131523	G	A	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr16	49547349	49547350	chr16:49547350:T:C	rs7189293	T	C	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr16	49640528	49640529	chr16:49640529:T:C	rs12444893	T	C	T	Sox2_MA0143.3	-5	0	-	0	0	.
chr16	49703650	49703651	chr16:49703651:C:T	rs113531885	C	T	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr16	49733655	49733656	chr16:49733656:G:A	rs7404616	G	A	G	Sox2_MA0143.3	17	0	-	0	0	.
chr16	49763962	49763963	chr16:49763963:C:T	rs13336163	C	T	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr16	49780611	49780612	chr16:49780612:A:G	rs9922183	A	G	G	Sox2_MA0143.3	24	0	-	0	0	.
chr16	49843190	49843191	chr16:49843191:A:G	rs2160565	A	G	A	Sox2_MA0143.3	11	0	-	0	0	.
chr16	49850015	49850016	chr16:49850016:T:A	rs34294937	T	A	T	Sox2_MA0143.3	-5	0	+	0	0	.
chr16	49896800	49896801	chr16:49896801:A:G	rs73578153	A	G	A	Sox2_MA0143.3	7	1	-	9.800647049772198	9.206767037375712	CCTTTGTT
chr16	49922005	49922006	chr16:49922006:G:A	rs11861018	G	A	G	Sox2_MA0143.3	7	1	+	8.676919043985553	3.3675628303222993	CCATTGTG
chr16	49938749	49938750	chr16:49938750:G:A	rs141959682	G	A	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr16	49948262	49948263	chr16:49948263:C:T	rs7191565	C	T	T	Sox2_MA0143.3	16	0	-	0	0	.
chr16	49958182	49958183	chr16:49958183:G:C	rs139753831	G	C	G	Sox2_MA0143.3	1	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr16	49958188	49958189	chr16:49958189:G:C	chr16:49958189:G:C	G	C	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr16	50059326	50059327	chr16:50059327:G:A	rs12599260	G	A	G	Sox2_MA0143.3	5	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr16	50060703	50060704	chr16:50060704:T:G	rs8048108	T	G	G	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr16	50060716	50060717	chr16:50060717:A:C	rs112138584	A	C	A	Sox2_MA0143.3	16	0	+	0	0	.
chr16	50248316	50248317	chr16:50248317:T:A	rs11076524	T	A	T	Sox2_MA0143.3	11	0	-	0	0	.
chr16	50248340	50248341	chr16:50248341:G:A	rs8043721	G	A	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr16	50273002	50273003	chr16:50273003:G:T	rs16948353	G	T	G	Sox2_MA0143.3	25	0	+	0	0	.
chr16	50277645	50277646	chr16:50277646:T:C	rs962455621	T	C	T	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr16	50308935	50308936	chr16:50308936:C:G	rs2302681	C	G	G	Sox2_MA0143.3	8	0	+	0	0	.
chr16	50355095	50355096	chr16:50355096:G:A	rs77225728	G	A	G	Sox2_MA0143.3	12	0	-	0	0	.
chr16	50403118	50403119	chr16:50403119:C:T	rs4027481	C	T	C	Sox2_MA0143.3	14	0	+	0	0	.
chr16	50407568	50407569	chr16:50407569:A:G	rs71384561	A	G	A	Sox2_MA0143.3	16	0	+	0	0	.
chr16	50439531	50439532	chr16:50439532:G:A	rs8064097	G	A	A	Sox2_MA0143.3	-20	0	-	0	0	.
chr16	50446297	50446298	chr16:50446298:C:G	rs541556865	C	G	C	Sox2_MA0143.3	22	0	+	0	0	.
chr16	50449454	50449455	chr16:50449455:C:T	rs12923053	C	T	C	Sox2_MA0143.3	9	0	-	0	0	.
chr16	50449455	50449456	chr16:50449456:G:A	rs4505320	G	A	G	Sox2_MA0143.3	8	0	-	0	0	.
chr16	50523884	50523885	chr16:50523885:G:A	rs144629229	G	A	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr16	50696366	50696367	chr16:50696367:G:A	chr16:50696367:G:A	G	A	G	Sox2_MA0143.3	23	0	-	0	0	.
chr16	50712282	50712283	chr16:50712283:G:A	rs104895464	G	A	G	Sox2_MA0143.3	24	0	+	0	0	.
chr16	50820547	50820548	chr16:50820548:A:G	rs16948878	A	G	A	Sox2_MA0143.3	7	1	+	3.5547341015215945	8.864090315184848	CCTTTGTA
chr16	50857431	50857432	chr16:50857432:T:C	rs6500343	T	C	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr16	50862075	50862076	chr16:50862076:C:A	rs12928855	C	A	C	Sox2_MA0143.3	26	0	-	0	0	.
chr16	50884003	50884004	chr16:50884004:C:G	rs1553020	C	G	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr16	51166272	51166273	chr16:51166273:G:A	rs77199405	G	A	G	Sox2_MA0143.3	8	0	-	0	0	.
chr16	51225813	51225814	chr16:51225814:T:C	rs4445901	T	C	C	Sox2_MA0143.3	26	0	-	0	0	.
chr16	51329348	51329349	chr16:51329349:C:A	rs16949691	C	A	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr16	51343788	51343789	chr16:51343789:C:G	rs1420988	C	G	c	Sox2_MA0143.3	1	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr16	51359408	51359409	chr16:51359409:C:G	rs187646839	C	G	C	Sox2_MA0143.3	13	0	+	0	0	.
chr16	51404365	51404366	chr16:51404366:G:A	rs62038919	G	A	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr16	51491519	51491520	chr16:51491520:A:G	rs4783817	A	G	A	Sox2_MA0143.3	3	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr16	51563125	51563126	chr16:51563126:A:G	rs8062350	A	G	G	Sox2_MA0143.3	8	0	+	0	0	.
chr16	51607475	51607476	chr16:51607476:T:G	rs115913403	T	G	T	Sox2_MA0143.3	25	0	-	0	0	.
chr16	51650997	51650998	chr16:51650998:C:G	chr16:51650998:C:G	C	G	C	Sox2_MA0143.3	23	0	+	0	0	.
chr16	51820156	51820157	chr16:51820157:T:C	rs11861489	T	C	C	Sox2_MA0143.3	6	1	+	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr16	51914971	51914972	chr16:51914972:A:G	rs573615210	A	G	A	Sox2_MA0143.3	-1	0	+	0	0	.
chr16	52070012	52070013	chr16:52070013:G:A	rs187133770	G	A	G	Sox2_MA0143.3	21	0	-	0	0	.
chr16	52070037	52070038	chr16:52070038:A:G	rs74969715	A	G	A	Sox2_MA0143.3	-4	0	-	0	0	.
chr16	52181259	52181260	chr16:52181260:C:T	rs2540702	C	T	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr16	52369003	52369004	chr16:52369004:G:A	rs12932054	G	A	T	Sox2_MA0143.3	18	0	+	0	0	.
chr16	52369010	52369011	chr16:52369011:T:C	rs1006693391	T	C	T	Sox2_MA0143.3	25	0	+	0	0	.
chr16	52435880	52435881	chr16:52435881:C:T	rs11641100	C	T	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr16	52498589	52498590	chr16:52498590:G:T	rs2077653	G	T	G	Sox2_MA0143.3	14	0	+	0	0	.
chr16	52549230	52549231	chr16:52549231:C:T	rs4784226	C	T	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr16	52629948	52629949	chr16:52629949:G:A	rs9940048	G	A	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr16	52674289	52674290	chr16:52674290:A:G	rs12931327	A	G	A	Sox2_MA0143.3	11	0	+	0	0	.
chr16	52747231	52747232	chr16:52747232:C:A	rs4784250	C	A	A	Sox2_MA0143.3	-4	0	-	0	0	.
chr16	52806107	52806108	chr16:52806108:C:T	rs145910625	C	T	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr16	52861949	52861950	chr16:52861950:C:A	rs74018518	C	A	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr16	52887922	52887923	chr16:52887923:G:C	rs9938453	G	C	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr16	52953191	52953192	chr16:52953192:T:C	rs1978339	T	C	T	Sox2_MA0143.3	-13	0	+	0	0	.
chr16	53022543	53022544	chr16:53022544:C:T	rs541261351	C	T	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr16	53090209	53090210	chr16:53090210:A:G	chr16:53090210:A:G	A	G	A	Sox2_MA0143.3	-11	0	-	0	0	.
chr16	53100102	53100103	chr16:53100103:T:G	rs975287714	T	G	T	Sox2_MA0143.3	14	0	+	0	0	.
chr16	53449463	53449464	chr16:53449464:A:G	rs4783811	A	G	G	Sox2_MA0143.3	24	0	+	0	0	.
chr16	53550752	53550753	chr16:53550753:T:C	rs115812859	T	C	T	Sox2_MA0143.3	10	0	-	0	0	.
chr16	53598673	53598674	chr16:53598674:T:C	rs16952347	T	C	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr16	53768581	53768582	chr16:53768582:C:T	rs11642015	C	T	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr16	53844951	53844952	chr16:53844952:C:T	rs111441373	C	T	C	Sox2_MA0143.3	25	0	-	0	0	.
chr16	53924562	53924563	chr16:53924563:A:G	rs11860076	A	G	a	Sox2_MA0143.3	23	0	+	0	0	.
chr16	54098026	54098027	chr16:54098027:G:T	rs62034139	G	T	G	Sox2_MA0143.3	27	0	-	0	0	.
chr16	54118135	54118136	chr16:54118136:A:T	rs11076023	A	T	T	Sox2_MA0143.3	-4	0	+	0	0	.
chr16	54200245	54200246	chr16:54200246:A:G	rs2001579	A	G	G	Sox2_MA0143.3	7	1	+	3.5547341015215945	8.864090315184848	CCTTTGTA
chr16	54210633	54210634	chr16:54210634:G:A	rs113206996	G	A	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr16	54249300	54249301	chr16:54249301:C:A	rs72811799	C	A	C	Sox2_MA0143.3	21	0	-	0	0	.
chr16	54355792	54355793	chr16:54355793:G:A	rs68053547	G	A	G	Sox2_MA0143.3	17	0	-	0	0	.
chr16	54430305	54430306	chr16:54430306:G:T	rs7189231	G	T	T	Sox2_MA0143.3	-6	0	-	0	0	.
chr16	54446906	54446907	chr16:54446907:C:T	rs541221435	C	T	C	Sox2_MA0143.3	21	0	+	0	0	.
chr16	54584213	54584214	chr16:54584214:T:A	rs11488926	T	A	t	Sox2_MA0143.3	23	0	+	0	0	.
chr16	54648151	54648152	chr16:54648152:G:A	rs28539243	G	A	A	Sox2_MA0143.3	21	0	-	0	0	.
chr16	54750388	54750389	chr16:54750389:T:C	rs1477084	T	C	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr16	54884631	54884632	chr16:54884632:C:G	rs185251976	C	G	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr16	54946021	54946022	chr16:54946022:C:T	rs138774008	C	T	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr16	54987273	54987274	chr16:54987274:C:T	rs7197090	C	T	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr16	54987315	54987316	chr16:54987316:G:A	rs61306765	G	A	G	Sox2_MA0143.3	25	0	+	0	0	.
chr16	55033543	55033544	chr16:55033544:A:G	rs923220	A	G	G	Sox2_MA0143.3	4	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr16	55100359	55100360	chr16:55100360:C:G	rs74022936	C	G	G	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr16	55131183	55131184	chr16:55131184:G:C	rs35727693	G	C	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr16	55275718	55275719	chr16:55275719:A:G	rs8051914	A	G	A	Sox2_MA0143.3	23	0	-	0	0	.
chr16	55421401	55421402	chr16:55421402:T:G	rs74019066	T	G	T	Sox2_MA0143.3	-20	0	-	0	0	.
chr16	55454143	55454144	chr16:55454144:G:A	rs539612174	G	A	G	Sox2_MA0143.3	15	0	-	0	0	.
chr16	55466618	55466619	chr16:55466619:A:C	rs34138000	A	C	C	Sox2_MA0143.3	25	0	+	0	0	.
chr16	55492963	55492964	chr16:55492964:G:A	rs243844	G	A	G	Sox2_MA0143.3	19	0	-	0	0	.
chr16	55510295	55510296	chr16:55510296:T:C	rs578190107	T	C	T	Sox2_MA0143.3	27	0	+	0	0	.
chr16	55625545	55625546	chr16:55625546:G:T	rs4479219	G	T	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr16	55628484	55628485	chr16:55628485:C:A	rs28873831	C	A	C	Sox2_MA0143.3	10	0	-	0	0	.
chr16	55668400	55668401	chr16:55668401:T:C	rs59187393	T	C	T	Sox2_MA0143.3	4	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr16	55749554	55749555	chr16:55749555:C:T	rs550603608	C	T	c	Sox2_MA0143.3	-17	0	-	0	0	.
chr16	55814383	55814384	chr16:55814384:C:A	rs3893204	C	A	-	Sox2_MA0143.3	-12	0	-	0	0	.
chr16	55828214	55828215	chr16:55828215:G:T	rs28533671	G	T	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr16	55839496	55839497	chr16:55839497:A:C	rs4783907	A	C	C	Sox2_MA0143.3	-5	0	-	0	0	.
chr16	55843001	55843002	chr16:55843002:G:A	rs59151405	G	A	G	Sox2_MA0143.3	7	1	+	8.864090315184848	3.5547341015215945	CCTTTGTG
chr16	55912445	55912446	chr16:55912446:G:C	rs8061441	G	C	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr16	55912845	55912846	chr16:55912846:G:A	rs55889290	G	A	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr16	55942889	55942890	chr16:55942890:A:G	rs6499807	A	G	G	Sox2_MA0143.3	6	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr16	55971554	55971555	chr16:55971555:G:A	rs7188041	G	A	G	Sox2_MA0143.3	13	0	-	0	0	.
chr16	56056515	56056516	chr16:56056516:T:C	rs7198661	T	C	C	Sox2_MA0143.3	20	0	-	0	0	.
chr16	56195968	56195969	chr16:56195969:T:C	rs72814429	T	C	T	Sox2_MA0143.3	-14	0	-	0	0	.
chr16	56212257	56212258	chr16:56212258:C:T	rs11647381	C	T	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr16	56212279	56212280	chr16:56212280:G:T	rs11647097	G	T	G	Sox2_MA0143.3	10	0	+	0	0	.
chr16	56246341	56246342	chr16:56246342:A:T	rs141676084	A	T	A	Sox2_MA0143.3	-3	0	-	0	0	.
chr16	56258951	56258952	chr16:56258952:A:C	rs148863302	A	C	A	Sox2_MA0143.3	-15	0	+	0	0	.
chr16	56339309	56339310	chr16:56339310:G:A	rs2617841	G	A	A	Sox2_MA0143.3	13	0	-	0	0	.
chr16	56450386	56450387	chr16:56450387:A:G	rs78298146	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr16	56605524	56605525	chr16:56605525:A:T	rs528023215	A	T	A	Sox2_MA0143.3	19	0	-	0	0	.
chr16	56677496	56677497	chr16:56677497:C:G	rs4783949	C	G	c	Sox2_MA0143.3	-17	0	+	0	0	.
chr16	56687860	56687861	chr16:56687861:A:T	rs74024338	A	T	A	Sox2_MA0143.3	8	0	-	0	0	.
chr16	56783619	56783620	chr16:56783620:C:T	rs1305742050	C	T	C	Sox2_MA0143.3	27	0	+	0	0	.
chr16	56910874	56910875	chr16:56910875:T:C	rs2099107	T	C	C	Sox2_MA0143.3	17	0	+	0	0	.
chr16	57004249	57004250	chr16:57004250:A:G	rs289708	A	G	N	Sox2_MA0143.3	-19	0	+	0	0	.
chr16	57018071	57018072	chr16:57018072:C:A	rs16965070	C	A	t	Sox2_MA0143.3	-17	0	-	0	0	.
chr16	57084367	57084368	chr16:57084368:C:G	rs149156437	C	G	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr16	57116107	57116108	chr16:57116108:C:T	rs118074426	C	T	C	Sox2_MA0143.3	1	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr16	57132065	57132066	chr16:57132066:G:A	rs16966632	G	A	A	Sox2_MA0143.3	15	0	+	0	0	.
chr16	57132625	57132626	chr16:57132626:A:T	rs11861384	A	T	A	Sox2_MA0143.3	-13	0	-	0	0	.
chr16	57186372	57186373	chr16:57186373:C:G	rs532163334	C	G	C	Sox2_MA0143.3	24	0	-	0	0	.
chr16	57186384	57186385	chr16:57186385:C:T	rs532577746	C	T	C	Sox2_MA0143.3	12	0	-	0	0	.
chr16	57194555	57194556	chr16:57194556:C:T	rs140359404	C	T	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr16	57283430	57283431	chr16:57283431:G:A	rs117331777	G	A	G	Sox2_MA0143.3	23	0	-	0	0	.
chr16	57319852	57319853	chr16:57319853:T:C	rs12924770	T	C	T	Sox2_MA0143.3	22	0	-	0	0	.
chr16	57336413	57336414	chr16:57336414:C:T	rs13334305	C	T	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr16	57378217	57378218	chr16:57378218:C:A	rs719695	C	A	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr16	57384863	57384864	chr16:57384864:G:A	rs41444650	G	A	G	Sox2_MA0143.3	16	0	+	0	0	.
chr16	57422785	57422786	chr16:57422786:A:G	rs66608459	A	G	a	Sox2_MA0143.3	19	0	-	0	0	.
chr16	57570381	57570382	chr16:57570382:C:T	rs372649343	C	T	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr16	57591946	57591947	chr16:57591947:G:A	rs55893070	G	A	A	Sox2_MA0143.3	27	0	+	0	0	.
chr16	57602392	57602393	chr16:57602393:C:T	rs8062400	C	T	C	Sox2_MA0143.3	11	0	-	0	0	.
chr16	57618220	57618221	chr16:57618221:C:T	rs13331403	C	T	C	Sox2_MA0143.3	1	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr16	57619527	57619528	chr16:57619528:C:T	rs34315510	C	T	C	Sox2_MA0143.3	0	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr16	57631269	57631270	chr16:57631270:A:G	rs13337416	A	G	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr16	57631270	57631271	chr16:57631271:A:C	rs13337417	A	C	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr16	57631724	57631725	chr16:57631725:C:T	rs75560689	C	T	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr16	57676626	57676627	chr16:57676627:G:T	rs66853547	G	T	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr16	57724819	57724820	chr16:57724820:C:A	rs2923144	C	A	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr16	57725931	57725932	chr16:57725932:C:T	rs4784008	C	T	C	Sox2_MA0143.3	21	0	+	0	0	.
chr16	57788821	57788822	chr16:57788822:C:T	rs74022044	C	T	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr16	57788858	57788859	chr16:57788859:T:C	rs112182711	T	C	T	Sox2_MA0143.3	22	0	+	0	0	.
chr16	57825076	57825077	chr16:57825077:A:C	rs2911347	A	C	A	Sox2_MA0143.3	-11	0	-	0	0	.
chr16	57867358	57867359	chr16:57867359:G:A	rs150172751	G	A	G	Sox2_MA0143.3	26	0	-	0	0	.
chr16	57990388	57990389	chr16:57990389:T:G	rs8062138	T	G	G	Sox2_MA0143.3	3	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr16	57991493	57991494	chr16:57991494:A:G	rs4784876	A	G	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr16	58119739	58119740	chr16:58119740:T:C	rs55901487	T	C	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr16	58177461	58177462	chr16:58177462:T:G	rs1820244	T	G	T	Sox2_MA0143.3	25	0	-	0	0	.
chr16	58195530	58195531	chr16:58195531:A:C	rs2550365	A	C	C	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr16	58206830	58206831	chr16:58206831:G:T	rs8063767	G	T	G	Sox2_MA0143.3	5	1	+	9.206767037375712	2.298012258060492	CCTTTGTC
chr16	58206831	58206832	chr16:58206832:T:C	rs8049422	T	C	T	Sox2_MA0143.3	6	1	+	9.206767037375712	2.298012258060492	CCTTTGTC
chr16	58222465	58222466	chr16:58222466:C:T	rs2550380	C	T	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr16	58279508	58279509	chr16:58279509:C:G	rs7200123	C	G	C	Sox2_MA0143.3	0	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr16	58338521	58338522	chr16:58338522:G:C	chr16:58338522:G:C	G	C	G	Sox2_MA0143.3	23	0	-	0	0	.
chr16	58459559	58459560	chr16:58459560:A:G	rs115047991	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr16	58459567	58459568	chr16:58459568:A:G	rs76273503	A	G	A	Sox2_MA0143.3	-5	0	-	0	0	.
chr16	58495368	58495369	chr16:58495369:T:C	rs144305468	T	C	T	Sox2_MA0143.3	6	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr16	58500205	58500206	chr16:58500206:T:G	rs552928706	T	G	T	Sox2_MA0143.3	4	1	+	9.800647049772198	2.8918922704569785	CCTTTGTT
chr16	58511319	58511320	chr16:58511320:G:A	rs191210714	G	A	G	Sox2_MA0143.3	13	0	+	0	0	.
chr16	58534212	58534213	chr16:58534213:A:G	rs16960223	A	G	A	Sox2_MA0143.3	16	0	-	0	0	.
chr16	58676954	58676955	chr16:58676955:C:T	rs575702459	C	T	C	Sox2_MA0143.3	16	0	+	0	0	.
chr16	58727996	58727997	chr16:58727997:T:C	rs257620	T	C	T	Sox2_MA0143.3	-10	0	-	0	0	.
chr16	58736567	58736568	chr16:58736568:T:C	rs1657177	T	C	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr16	58936982	58936983	chr16:58936983:C:T	rs7191883	C	T	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr16	58937360	58937361	chr16:58937361:T:A	rs62064985	T	A	T	Sox2_MA0143.3	-12	0	+	0	0	.
chr16	58937374	58937375	chr16:58937375:T:C	rs8056321	T	C	c	Sox2_MA0143.3	2	1	+	9.800647049772198	3.494828071296623	CCTTTGTT
chr16	58947564	58947565	chr16:58947565:A:T	rs36081964	A	T	A	Sox2_MA0143.3	27	0	+	0	0	.
chr16	59040391	59040392	chr16:59040392:A:T	rs56296440	A	T	A	Sox2_MA0143.3	-4	0	+	0	0	.
chr16	59211059	59211060	chr16:59211060:A:T	chr16:59211060:A:T	A	T	A	Sox2_MA0143.3	6	1	-	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr16	59280409	59280410	chr16:59280410:T:G	rs7189817	T	G	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr16	59287106	59287107	chr16:59287107:G:A	rs13331315	G	A	G	Sox2_MA0143.3	21	0	+	0	0	.
chr16	59329168	59329169	chr16:59329169:T:C	rs17185988	T	C	T	Sox2_MA0143.3	-5	0	+	0	0	.
chr16	59478648	59478649	chr16:59478649:C:A	rs72794325	C	A	C	Sox2_MA0143.3	0	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr16	59510346	59510347	chr16:59510347:G:A	rs8055032	G	A	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr16	59686720	59686721	chr16:59686721:G:A	rs6500059	G	A	A	Sox2_MA0143.3	14	0	+	0	0	.
chr16	59808103	59808104	chr16:59808104:G:A	rs11643555	G	A	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr16	59808133	59808134	chr16:59808134:A:G	rs9940224	A	G	A	Sox2_MA0143.3	15	0	+	0	0	.
chr16	60189228	60189229	chr16:60189229:T:A	rs1411503023	T	A	T	Sox2_MA0143.3	-6	0	+	0	0	.
chr16	60302079	60302080	chr16:60302080:T:C	rs993647	T	C	C	Sox2_MA0143.3	13	0	+	0	0	.
chr16	60337990	60337991	chr16:60337991:C:G	rs8047907	C	G	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr16	60465707	60465708	chr16:60465708:A:G	rs73560073	A	G	A	Sox2_MA0143.3	-11	0	-	0	0	.
chr16	60655171	60655172	chr16:60655172:G:C	rs28683737	G	C	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr16	60740068	60740069	chr16:60740069:C:T	rs8052136	C	T	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr16	60764907	60764908	chr16:60764908:G:A	rs35270449	G	A	G	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr16	60764910	60764911	chr16:60764911:A:T	rs7186652	A	T	A	Sox2_MA0143.3	-3	0	-	0	0	.
chr16	60883907	60883908	chr16:60883908:C:G	rs7192523	C	G	G	Sox2_MA0143.3	22	0	+	0	0	.
chr16	61040611	61040612	chr16:61040612:T:C	rs16962937	T	C	T	Sox2_MA0143.3	15	0	-	0	0	.
chr16	61467342	61467343	chr16:61467343:C:T	rs12446237	C	T	C	Sox2_MA0143.3	19	0	-	0	0	.
chr16	61605813	61605814	chr16:61605814:A:C	rs11866491	A	C	A	Sox2_MA0143.3	24	0	+	0	0	.
chr16	61964500	61964501	chr16:61964501:G:A	rs9932925	G	A	A	Sox2_MA0143.3	19	0	-	0	0	.
chr16	62038651	62038652	chr16:62038652:G:A	rs72787517	G	A	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr16	62446023	62446024	chr16:62446024:A:G	rs4346220	A	G	A	Sox2_MA0143.3	-9	0	-	0	0	.
chr16	62463599	62463600	chr16:62463600:G:A	rs12445173	G	A	g	Sox2_MA0143.3	14	0	-	0	0	.
chr16	62597288	62597289	chr16:62597289:G:A	rs3011245	G	A	G	Sox2_MA0143.3	26	0	-	0	0	.
chr16	62639540	62639541	chr16:62639541:A:T	rs288606	A	T	A	Sox2_MA0143.3	-20	0	-	0	0	.
chr16	63313009	63313010	chr16:63313010:T:G	rs191620023	T	G	T	Sox2_MA0143.3	4	1	+	8.676919043985553	1.7681642646703322	CCATTGTG
chr16	63452137	63452138	chr16:63452138:A:G	rs13338335	A	G	A	Sox2_MA0143.3	17	0	-	0	0	.
chr16	63531099	63531100	chr16:63531100:C:G	rs1364167	C	G	G	Sox2_MA0143.3	16	0	-	0	0	.
chr16	63613093	63613094	chr16:63613094:A:G	rs1345861	A	G	A	Sox2_MA0143.3	4	1	-	8.676919043985553	1.7681642646703322	CCATTGTG
chr16	63665606	63665607	chr16:63665607:C:T	rs6498915	C	T	T	Sox2_MA0143.3	23	0	+	0	0	.
chr16	64011650	64011651	chr16:64011651:C:A	rs77930139	C	A	C	Sox2_MA0143.3	0	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr16	64092567	64092568	chr16:64092568:T:A	rs1458575	T	A	T	Sox2_MA0143.3	-3	0	+	0	0	.
chr16	64138252	64138253	chr16:64138253:T:C	rs1023886	T	C	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr16	64319775	64319776	chr16:64319776:A:G	rs1437141	A	G	A	Sox2_MA0143.3	-10	0	-	0	0	.
chr16	64361748	64361749	chr16:64361749:C:A	rs1437163	C	A	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr16	64365625	64365626	chr16:64365626:C:A	rs741596	C	A	C	Sox2_MA0143.3	12	0	+	0	0	.
chr16	64365636	64365637	chr16:64365637:C:T	rs741597	C	T	C	Sox2_MA0143.3	23	0	+	0	0	.
chr16	64421730	64421731	chr16:64421731:A:G	rs1370237	A	G	A	Sox2_MA0143.3	23	0	-	0	0	.
chr16	64435007	64435008	chr16:64435008:A:G	rs62041620	A	G	A	Sox2_MA0143.3	-20	0	+	0	0	.
chr16	64490049	64490050	chr16:64490050:A:G	rs13337190	A	G	G	Sox2_MA0143.3	20	0	-	0	0	.
chr16	64615361	64615362	chr16:64615362:A:G	rs72786846	A	G	a	Sox2_MA0143.3	-5	0	-	0	0	.
chr16	64711863	64711864	chr16:64711864:G:C	rs7200661	G	C	G	Sox2_MA0143.3	1	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr16	64739339	64739340	chr16:64739340:C:T	rs231075	C	T	T	Sox2_MA0143.3	-12	0	-	0	0	.
chr16	64820884	64820885	chr16:64820885:G:T	rs17495513	G	T	T	Sox2_MA0143.3	-4	0	+	0	0	.
chr16	64989677	64989678	chr16:64989678:G:T	rs35198	G	T	G	Sox2_MA0143.3	20	0	+	0	0	.
chr16	65059475	65059476	chr16:65059476:C:T	rs7204729	C	T	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr16	65099162	65099163	chr16:65099163:T:C	rs4967868	T	C	T	Sox2_MA0143.3	23	0	+	0	0	.
chr16	65253484	65253485	chr16:65253485:G:A	rs12923125	G	A	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr16	65281899	65281900	chr16:65281900:A:G	rs8045789	A	G	A	Sox2_MA0143.3	4	1	-	3.5547341015215945	-3.3540206777936254	CCTTTGTA
chr16	65281902	65281903	chr16:65281903:G:T	rs11866973	G	T	G	Sox2_MA0143.3	1	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr16	65320005	65320006	chr16:65320006:C:A	rs1465454	C	A	C	Sox2_MA0143.3	26	0	-	0	0	.
chr16	65323830	65323831	chr16:65323831:G:C	rs72778833	G	C	g	Sox2_MA0143.3	0	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr16	65430009	65430010	chr16:65430010:A:G	rs702112	A	G	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr16	65454211	65454212	chr16:65454212:G:C	rs4785827	G	C	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr16	65493176	65493177	chr16:65493177:G:T	rs142938933	G	T	G	Sox2_MA0143.3	18	0	-	0	0	.
chr16	65511196	65511197	chr16:65511197:G:T	chr16:65511197:G:T	G	T	G	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr16	65511197	65511198	chr16:65511198:A:T	chr16:65511198:A:T	A	T	A	Sox2_MA0143.3	-1	0	-	0	0	.
chr16	65670982	65670983	chr16:65670983:G:A	rs17443158	G	A	G	Sox2_MA0143.3	0	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr16	65838653	65838654	chr16:65838654:C:T	rs12162046	C	T	T	Sox2_MA0143.3	0	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr16	65860041	65860042	chr16:65860042:G:A	rs11642073	G	A	G	Sox2_MA0143.3	17	0	+	0	0	.
chr16	65890015	65890016	chr16:65890016:T:C	rs10500531	T	C	t	Sox2_MA0143.3	-4	0	+	0	0	.
chr16	66120659	66120660	chr16:66120660:T:C	rs112190577	T	C	T	Sox2_MA0143.3	16	0	+	0	0	.
chr16	66230809	66230810	chr16:66230810:C:T	rs74023965	C	T	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr16	66263561	66263562	chr16:66263562:G:A	rs181865303	G	A	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr16	66271995	66271996	chr16:66271996:C:T	rs4785812	C	T	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr16	66278767	66278768	chr16:66278768:A:T	rs183730737	A	T	A	Sox2_MA0143.3	26	0	+	0	0	.
chr16	66348080	66348081	chr16:66348081:C:A	rs12596005	C	A	C	Sox2_MA0143.3	1	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr16	66382871	66382872	chr16:66382872:G:A	rs140606241	G	A	G	Sox2_MA0143.3	18	0	+	0	0	.
chr16	66400283	66400284	chr16:66400284:T:C	rs6499081	T	C	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr16	66413206	66413207	chr16:66413207:G:A	rs12926733	G	A	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr16	66425997	66425998	chr16:66425998:T:C	rs34285678	T	C	T	Sox2_MA0143.3	12	0	+	0	0	.
chr16	66458210	66458211	chr16:66458211:A:G	rs117667318	A	G	A	Sox2_MA0143.3	18	0	+	0	0	.
chr16	66478800	66478801	chr16:66478801:G:A	rs57842924	G	A	G	Sox2_MA0143.3	-9	0	+	0	0	.
chr16	66513367	66513368	chr16:66513368:A:C	rs2241618	A	C	A	Sox2_MA0143.3	2	1	-	9.800647049772198	3.494828071296623	CCTTTGTT
chr16	66513370	66513371	chr16:66513371:T:C	rs115565666	T	C	T	Sox2_MA0143.3	-1	0	-	0	0	.
chr16	66525330	66525331	chr16:66525331:T:C	rs138450128	T	C	T	Sox2_MA0143.3	3	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr16	66690262	66690263	chr16:66690263:G:A	chr16:66690263:G:A	G	A	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr16	66751378	66751379	chr16:66751379:G:C	rs376435463	G	C	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr16	66974892	66974893	chr16:66974893:T:C	rs12448417	T	C	t	Sox2_MA0143.3	17	0	+	0	0	.
chr16	67428364	67428365	chr16:67428365:C:T	rs74962334	C	T	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr16	67804108	67804109	chr16:67804109:A:G	rs141523304	A	G	A	Sox2_MA0143.3	2	1	-	3.5547341015215945	-2.751084876953981	CCTTTGTA
chr16	67806317	67806318	chr16:67806318:G:A	rs145391816	G	A	G	Sox2_MA0143.3	17	0	+	0	0	.
chr16	67845496	67845497	chr16:67845497:G:A	rs3809630	G	A	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr16	67872090	67872091	chr16:67872091:G:A	rs76649027	G	A	G	Sox2_MA0143.3	23	0	-	0	0	.
chr16	67894138	67894139	chr16:67894139:G:A	rs16942887	G	A	G	Sox2_MA0143.3	-9	0	+	0	0	.
chr16	67951517	67951518	chr16:67951518:A:C	rs947664952	A	C	A	Sox2_MA0143.3	-17	0	-	0	0	.
chr16	68040621	68040622	chr16:68040622:A:G	rs1024885855	A	G	A	Sox2_MA0143.3	-8	0	-	0	0	.
chr16	68048623	68048624	chr16:68048624:A:G	rs12445533	A	G	A	Sox2_MA0143.3	-15	0	+	0	0	.
chr16	68094200	68094201	chr16:68094201:A:G	rs12599178	A	G	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr16	68237357	68237358	chr16:68237358:C:G	rs117571960	C	G	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr16	68268081	68268082	chr16:68268082:A:C	rs2863980	A	C	C	Sox2_MA0143.3	26	0	+	0	0	.
chr16	68325504	68325505	chr16:68325505:G:C	rs4783620	G	C	g	Sox2_MA0143.3	9	0	-	0	0	.
chr16	68332051	68332052	chr16:68332052:C:T	rs4783553	C	T	T	Sox2_MA0143.3	21	0	+	0	0	.
chr16	68344418	68344419	chr16:68344419:C:T	rs34598145	C	T	C	Sox2_MA0143.3	25	0	+	0	0	.
chr16	68425532	68425533	chr16:68425533:C:T	rs1862755	C	T	C	Sox2_MA0143.3	5	1	-	9.019595766176417	2.110840986861197	CCATTGTC
chr16	68539314	68539315	chr16:68539315:C:G	rs1055502117	C	G	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr16	68539324	68539325	chr16:68539325:C:T	rs181520167	C	T	C	Sox2_MA0143.3	7	1	+	9.019595766176417	9.613475778572903	CCATTGTC
chr16	68539328	68539329	chr16:68539329:C:G	rs1439561514	C	G	C	Sox2_MA0143.3	11	0	+	0	0	.
chr16	68557252	68557253	chr16:68557253:T:A	rs1728784	T	A	A	Sox2_MA0143.3	-20	0	-	0	0	.
chr16	68785103	68785104	chr16:68785104:C:T	rs1981871	C	T	C	Sox2_MA0143.3	25	0	+	0	0	.
chr16	68885093	68885094	chr16:68885094:T:C	rs79565258	T	C	T	Sox2_MA0143.3	-20	0	-	0	0	.
chr16	69189073	69189074	chr16:69189074:G:A	rs111841318	G	A	G	Sox2_MA0143.3	1	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr16	69287106	69287107	chr16:69287107:T:C	rs559964719	T	C	T	Sox2_MA0143.3	-11	0	+	0	0	.
chr16	69309726	69309727	chr16:69309727:A:G	rs73562900	A	G	A	Sox2_MA0143.3	23	0	+	0	0	.
chr16	69332032	69332033	chr16:69332033:G:A	rs72795275	G	A	G	Sox2_MA0143.3	1	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr16	69366303	69366304	chr16:69366304:T:G	rs35124791	T	G	T	Sox2_MA0143.3	2	1	-	8.676919043985553	2.5582713367092715	CCATTGTG
chr16	69437095	69437096	chr16:69437096:T:C	rs56735557	T	C	T	Sox2_MA0143.3	-3	0	+	0	0	.
chr16	69577678	69577679	chr16:69577679:A:G	rs11075728	A	G	A	Sox2_MA0143.3	-20	0	-	0	0	.
chr16	69687470	69687471	chr16:69687471:T:C	rs9888993	T	C	T	Sox2_MA0143.3	-9	0	+	0	0	.
chr16	69687511	69687512	chr16:69687512:G:A	rs9889219	G	A	A	Sox2_MA0143.3	23	0	+	0	0	.
chr16	69714965	69714966	chr16:69714966:G:A	rs1131341	G	A	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr16	69719012	69719013	chr16:69719013:T:C	rs2917676	T	C	C	Sox2_MA0143.3	8	0	-	0	0	.
chr16	69721185	69721186	chr16:69721186:C:T	rs139106688	C	T	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr16	69721186	69721187	chr16:69721187:G:A	rs118176310	G	A	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr16	69742473	69742474	chr16:69742474:T:A	rs1075935	T	A	T	Sox2_MA0143.3	-18	0	-	0	0	.
chr16	69796752	69796753	chr16:69796753:A:G	rs6499256	A	G	A	Sox2_MA0143.3	-18	0	+	0	0	.
chr16	69867202	69867203	chr16:69867203:T:A	rs4985450	T	A	A	Sox2_MA0143.3	21	0	-	0	0	.
chr16	69890315	69890316	chr16:69890316:A:G	rs75109048	A	G	A	Sox2_MA0143.3	-3	0	+	0	0	.
chr16	69929451	69929452	chr16:69929452:G:A	rs1566452	G	A	G	Sox2_MA0143.3	14	0	-	0	0	.
chr16	69954469	69954470	chr16:69954470:T:C	rs2549097	T	C	.	Sox2_MA0143.3	-3	0	+	0	0	.
chr16	70161654	70161655	chr16:70161655:C:T	rs11643801	C	T	C	Sox2_MA0143.3	19	0	+	0	0	.
chr16	70162156	70162157	chr16:70162157:C:G	rs867415545	C	G	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr16	70529367	70529368	chr16:70529368:A:G	rs11075766	A	G	A	Sox2_MA0143.3	9	0	-	0	0	.
chr16	70648955	70648956	chr16:70648956:C:T	rs28393835	C	T	C	Sox2_MA0143.3	12	0	+	0	0	.
chr16	70693489	70693490	chr16:70693490:G:A	chr16:70693490:G:A	G	A	G	Sox2_MA0143.3	7	1	+	8.864090315184848	3.5547341015215945	CCTTTGTG
chr16	70695752	70695753	chr16:70695753:G:A	rs186365617	G	A	G	Sox2_MA0143.3	8	0	-	0	0	.
chr16	70697398	70697399	chr16:70697399:G:A	rs2242126	G	A	G	Sox2_MA0143.3	24	0	-	0	0	.
chr16	70697424	70697425	chr16:70697425:A:G	rs9924014	A	G	A	Sox2_MA0143.3	-2	0	-	0	0	.
chr16	70697440	70697441	chr16:70697441:T:C	rs9934869	T	C	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr16	70703265	70703266	chr16:70703266:G:T	rs761751730	G	T	G	Sox2_MA0143.3	27	0	-	0	0	.
chr16	70703294	70703295	chr16:70703295:C:T	rs16970439	C	T	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr16	70713465	70713466	chr16:70713466:G:A	rs79489174	G	A	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr16	70731224	70731225	chr16:70731225:G:A	rs60028268	G	A	A	Sox2_MA0143.3	-17	0	-	0	0	.
chr16	70738283	70738284	chr16:70738284:G:A	rs12449025	G	A	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr16	70741055	70741056	chr16:70741056:G:A	rs78423816	G	A	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr16	70800584	70800585	chr16:70800585:G:A	rs187033924	G	A	G	Sox2_MA0143.3	14	0	+	0	0	.
chr16	70800586	70800587	chr16:70800587:A:G	rs191071147	A	G	A	Sox2_MA0143.3	16	0	+	0	0	.
chr16	70864863	70864864	chr16:70864864:G:A	rs9936587	G	A	G	Sox2_MA0143.3	16	0	+	0	0	.
chr16	70967135	70967136	chr16:70967136:G:C	rs55899247	G	C	G	Sox2_MA0143.3	7	1	-	9.206767037375712	8.864090315184848	CCTTTGTC
chr16	71116485	71116486	chr16:71116486:A:C	rs11075869	A	C	.	Sox2_MA0143.3	23	0	+	0	0	.
chr16	71242162	71242163	chr16:71242163:G:T	rs12051098	G	T	T	Sox2_MA0143.3	-7	0	-	0	0	.
chr16	71242163	71242164	chr16:71242164:A:C	rs12051093	A	C	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr16	71294182	71294183	chr16:71294183:G:C	rs12708910	G	C	G	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr16	71294193	71294194	chr16:71294194:C:A	rs3114640	C	A	A	Sox2_MA0143.3	-11	0	-	0	0	.
chr16	71347975	71347976	chr16:71347976:C:T	rs12933065	C	T	T	Sox2_MA0143.3	5	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr16	71440770	71440771	chr16:71440771:T:C	rs76004808	T	C	T	Sox2_MA0143.3	-8	0	-	0	0	.
chr16	71499927	71499928	chr16:71499928:C:T	rs62056191	C	T	C	Sox2_MA0143.3	24	0	-	0	0	.
chr16	71499968	71499969	chr16:71499969:C:T	rs1028926564	C	T	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr16	71505086	71505087	chr16:71505087:G:A	rs74026831	G	A	G	Sox2_MA0143.3	0	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr16	71566633	71566634	chr16:71566634:C:A	rs3794689	C	A	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr16	71640978	71640979	chr16:71640979:C:G	rs2303225	C	G	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr16	71783266	71783267	chr16:71783267:A:C	rs11866795	A	C	A	Sox2_MA0143.3	-17	0	+	0	0	.
chr16	72001689	72001690	chr16:72001690:A:C	rs1025068	A	C	c	Sox2_MA0143.3	-7	0	+	0	0	.
chr16	72017469	72017470	chr16:72017470:A:G	rs2278027	A	G	G	Sox2_MA0143.3	-2	0	+	0	0	.
chr16	72084135	72084136	chr16:72084136:T:C	rs140223256	T	C	T	Sox2_MA0143.3	-3	0	+	0	0	.
chr16	72084165	72084166	chr16:72084166:T:C	rs13334681	T	C	T	Sox2_MA0143.3	27	0	+	0	0	.
chr16	72108695	72108696	chr16:72108696:C:A	rs9925763	C	A	C	Sox2_MA0143.3	27	0	+	0	0	.
chr16	72123818	72123819	chr16:72123819:C:T	rs11075922	C	T	C	Sox2_MA0143.3	21	0	-	0	0	.
chr16	72190225	72190226	chr16:72190226:A:G	rs190861368	A	G	A	Sox2_MA0143.3	26	0	+	0	0	.
chr16	72202779	72202780	chr16:72202780:T:A	rs16970707	T	A	T	Sox2_MA0143.3	4	1	+	9.800647049772198	2.8918922704569785	CCTTTGTT
chr16	72427837	72427838	chr16:72427838:G:T	rs573574085	G	T	G	Sox2_MA0143.3	0	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr16	72500705	72500706	chr16:72500706:C:G	rs16970974	C	G	C	Sox2_MA0143.3	10	0	+	0	0	.
chr16	72764656	72764657	chr16:72764657:G:C	rs190374049	G	C	G	Sox2_MA0143.3	17	0	+	0	0	.
chr16	72908428	72908429	chr16:72908429:C:T	rs75395117	C	T	C	Sox2_MA0143.3	8	0	-	0	0	.
chr16	72912176	72912177	chr16:72912177:G:C	rs55919245	G	C	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr16	72974330	72974331	chr16:72974331:C:T	rs12325562	C	T	C	Sox2_MA0143.3	12	0	-	0	0	.
chr16	72974348	72974349	chr16:72974349:A:C	rs12325558	A	C	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr16	72974357	72974358	chr16:72974358:G:A	rs4140672	G	A	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr16	73011325	73011326	chr16:73011326:T:C	rs6499606	T	C	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr16	73016676	73016677	chr16:73016677:C:G	rs11860416	C	G	C	Sox2_MA0143.3	21	0	+	0	0	.
chr16	73091331	73091332	chr16:73091332:T:C	rs9926271	T	C	C	Sox2_MA0143.3	17	0	-	0	0	.
chr16	73148293	73148294	chr16:73148294:C:G	rs7192374	C	G	G	Sox2_MA0143.3	13	0	+	0	0	.
chr16	73170713	73170714	chr16:73170714:A:T	rs748954790	A	T	A	Sox2_MA0143.3	12	0	-	0	0	.
chr16	73268814	73268815	chr16:73268815:C:T	rs189337796	C	T	C	Sox2_MA0143.3	22	0	-	0	0	.
chr16	73304506	73304507	chr16:73304507:G:A	rs16971691	G	A	G	Sox2_MA0143.3	11	0	+	0	0	.
chr16	73326486	73326487	chr16:73326487:C:G	rs12716891	C	G	G	Sox2_MA0143.3	27	0	-	0	0	.
chr16	73334587	73334588	chr16:73334588:C:G	rs542351376	C	G	C	Sox2_MA0143.3	20	0	+	0	0	.
chr16	73344974	73344975	chr16:73344975:G:T	rs12935542	G	T	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr16	73383814	73383815	chr16:73383815:C:A	rs527827784	C	A	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr16	73385827	73385828	chr16:73385828:G:T	rs8063372	G	T	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr16	73393536	73393537	chr16:73393537:C:T	rs9930953	C	T	T	Sox2_MA0143.3	-7	0	-	0	0	.
chr16	73398755	73398756	chr16:73398756:G:C	rs2052578	G	C	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr16	73399568	73399569	chr16:73399569:T:A	rs150634850	T	A	T	Sox2_MA0143.3	-11	0	-	0	0	.
chr16	73434016	73434017	chr16:73434017:C:T	rs1423726	C	T	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr16	73438894	73438895	chr16:73438895:G:A	rs34088745	G	A	G	Sox2_MA0143.3	23	0	-	0	0	.
chr16	73438920	73438921	chr16:73438921:A:T	rs8057001	A	T	A	Sox2_MA0143.3	-3	0	-	0	0	.
chr16	73483917	73483918	chr16:73483918:C:T	rs141836445	C	T	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr16	73568675	73568676	chr16:73568676:C:T	rs137871707	C	T	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr16	73651910	73651911	chr16:73651911:A:C	rs1904831	A	C	C	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr16	73921602	73921603	chr16:73921603:A:T	rs72787307	A	T	a	Sox2_MA0143.3	15	0	+	0	0	.
chr16	73997193	73997194	chr16:73997194:C:T	rs143365223	C	T	C	Sox2_MA0143.3	9	0	+	0	0	.
chr16	74090977	74090978	chr16:74090978:G:A	rs7500608	G	A	A	Sox2_MA0143.3	7	1	-	9.019595766176417	9.613475778572903	CCATTGTC
chr16	74192321	74192322	chr16:74192322:T:C	rs807293	T	C	T	Sox2_MA0143.3	19	0	-	0	0	.
chr16	74192354	74192355	chr16:74192355:C:G	rs4636933	C	G	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr16	74238318	74238319	chr16:74238319:A:G	rs78361281	A	G	A	Sox2_MA0143.3	-7	0	-	0	0	.
chr16	74238830	74238831	chr16:74238831:A:C	rs11649339	A	C	A	Sox2_MA0143.3	9	0	+	0	0	.
chr16	74418172	74418173	chr16:74418173:G:A	rs62056016	G	A	.	Sox2_MA0143.3	-14	0	-	0	0	.
chr16	74502089	74502090	chr16:74502090:C:T	rs74409136	C	T	C	Sox2_MA0143.3	17	0	+	0	0	.
chr16	74724511	74724512	chr16:74724512:T:G	rs1214497832	T	G	T	Sox2_MA0143.3	-17	0	+	0	0	.
chr16	74743649	74743650	chr16:74743650:G:A	rs72792761	G	A	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr16	74766555	74766556	chr16:74766556:C:G	rs28475834	C	G	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr16	74805312	74805313	chr16:74805313:A:G	rs12599967	A	G	A	Sox2_MA0143.3	20	0	+	0	0	.
chr16	74843636	74843637	chr16:74843637:G:A	rs112940278	G	A	G	Sox2_MA0143.3	-5	0	+	0	0	.
chr16	74852122	74852123	chr16:74852123:A:G	rs113818233	A	G	A	Sox2_MA0143.3	-20	0	-	0	0	.
chr16	74868949	74868950	chr16:74868950:A:G	rs72796678	A	G	A	Sox2_MA0143.3	17	0	+	0	0	.
chr16	74888879	74888880	chr16:74888880:T:C	rs11641435	T	C	T	Sox2_MA0143.3	6	1	+	9.206767037375712	2.298012258060492	CCTTTGTC
chr16	74992322	74992323	chr16:74992323:C:A	rs189631151	C	A	C	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr16	74999016	74999017	chr16:74999017:G:A	rs532758812	G	A	G	Sox2_MA0143.3	-5	0	+	0	0	.
chr16	74999034	74999035	chr16:74999035:G:C	rs1024675760	G	C	G	Sox2_MA0143.3	13	0	+	0	0	.
chr16	75043163	75043164	chr16:75043164:A:G	rs140145869	A	G	A	Sox2_MA0143.3	18	0	+	0	0	.
chr16	75065409	75065410	chr16:75065410:G:A	rs943427971	G	A	g	Sox2_MA0143.3	-14	0	+	0	0	.
chr16	75088468	75088469	chr16:75088469:A:C	rs117321138	A	C	A	Sox2_MA0143.3	10	0	+	0	0	.
chr16	75182064	75182065	chr16:75182065:C:A	rs56178552	C	A	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr16	75222352	75222353	chr16:75222353:A:G	rs8057145	A	G	a	Sox2_MA0143.3	-2	0	-	0	0	.
chr16	75238130	75238131	chr16:75238131:G:A	rs730367	G	A	G	Sox2_MA0143.3	23	0	-	0	0	.
chr16	75244942	75244943	chr16:75244943:G:C	rs2870472	G	C	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr16	75256043	75256044	chr16:75256044:G:A	rs147424513	G	A	A	Sox2_MA0143.3	16	0	+	0	0	.
chr16	75296755	75296756	chr16:75296756:C:A	rs954585764	C	A	C	Sox2_MA0143.3	22	0	-	0	0	.
chr16	75309298	75309299	chr16:75309299:G:C	rs4536500	G	C	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr16	75440719	75440720	chr16:75440720:C:T	rs7200053	C	T	C	Sox2_MA0143.3	23	0	+	0	0	.
chr16	75472673	75472674	chr16:75472674:G:C	rs37605	G	C	G	Sox2_MA0143.3	-16	0	-	0	0	.
chr16	75495678	75495679	chr16:75495679:G:A	rs78216861	G	A	G	Sox2_MA0143.3	22	0	-	0	0	.
chr16	75533483	75533484	chr16:75533484:C:T	rs58673511	C	T	C	Sox2_MA0143.3	21	0	+	0	0	.
chr16	75535905	75535906	chr16:75535906:G:A	rs2641803	G	A	G	Sox2_MA0143.3	8	0	-	0	0	.
chr16	75535916	75535917	chr16:75535917:C:A	rs2550884	C	A	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr16	75545334	75545335	chr16:75545335:A:T	rs2738801	A	T	A	Sox2_MA0143.3	-10	0	-	0	0	.
chr16	75589470	75589471	chr16:75589471:T:C	rs373445261	T	C	T	Sox2_MA0143.3	-15	0	+	0	0	.
chr16	75732974	75732975	chr16:75732975:A:G	rs117657830	A	G	A	Sox2_MA0143.3	17	0	-	0	0	.
chr16	75733800	75733801	chr16:75733801:C:G	rs75793199	C	G	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr16	75733865	75733866	chr16:75733866:T:C	rs76838143	T	C	T	Sox2_MA0143.3	24	0	+	0	0	.
chr16	75976699	75976700	chr16:75976700:C:T	rs6564298	C	T	T	Sox2_MA0143.3	-16	0	+	0	0	.
chr16	76059403	76059404	chr16:76059404:T:C	rs2432615	T	C	c	Sox2_MA0143.3	17	0	+	0	0	.
chr16	76202213	76202214	chr16:76202214:C:G	rs11149879	C	G	C	Sox2_MA0143.3	18	0	-	0	0	.
chr16	76265274	76265275	chr16:76265275:C:G	rs77315606	C	G	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr16	76419335	76419336	chr16:76419336:C:T	rs4243118	C	T	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr16	76436173	76436174	chr16:76436174:G:T	rs28833619	G	T	G	Sox2_MA0143.3	27	0	-	0	0	.
chr16	76598620	76598621	chr16:76598621:G:A	rs12930547	G	A	A	Sox2_MA0143.3	19	0	+	0	0	.
chr16	77189282	77189283	chr16:77189283:T:C	rs7185889	T	C	T	Sox2_MA0143.3	24	0	-	0	0	.
chr16	77299661	77299662	chr16:77299662:A:G	rs62044016	A	G	A	Sox2_MA0143.3	-13	0	-	0	0	.
chr16	77308671	77308672	chr16:77308672:A:C	rs10514413	A	C	A	Sox2_MA0143.3	6	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr16	77330656	77330657	chr16:77330657:C:T	rs6564426	C	T	C	Sox2_MA0143.3	16	0	-	0	0	.
chr16	77359174	77359175	chr16:77359175:C:G	rs891134	C	G	C	Sox2_MA0143.3	1	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr16	77405114	77405115	chr16:77405115:T:C	rs17688279	T	C	T	Sox2_MA0143.3	-7	0	-	0	0	.
chr16	77471139	77471140	chr16:77471140:G:A	rs4888635	G	A	G	Sox2_MA0143.3	7	1	+	8.864090315184848	3.5547341015215945	CCTTTGTG
chr16	77520569	77520570	chr16:77520570:A:G	rs1389522	A	G	G	Sox2_MA0143.3	9	0	-	0	0	.
chr16	77539503	77539504	chr16:77539504:T:C	rs11861969	T	C	T	Sox2_MA0143.3	-20	0	-	0	0	.
chr16	77549106	77549107	chr16:77549107:C:T	rs11642459	C	T	C	Sox2_MA0143.3	0	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr16	77580075	77580076	chr16:77580076:C:G	rs17772265	C	G	C	Sox2_MA0143.3	15	0	+	0	0	.
chr16	77603338	77603339	chr16:77603339:A:G	rs62046616	A	G	A	Sox2_MA0143.3	-8	0	-	0	0	.
chr16	77681142	77681143	chr16:77681143:T:C	rs9930144	T	C	T	Sox2_MA0143.3	17	0	-	0	0	.
chr16	77749610	77749611	chr16:77749611:G:T	rs4888670	G	T	T	Sox2_MA0143.3	-20	0	-	0	0	.
chr16	77834110	77834111	chr16:77834111:C:A	rs17774303	C	A	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr16	77937490	77937491	chr16:77937491:A:C	rs12928323	A	C	-	Sox2_MA0143.3	-8	0	+	0	0	.
chr16	77961511	77961512	chr16:77961512:G:A	rs531747972	G	A	G	Sox2_MA0143.3	23	0	+	0	0	.
chr16	78045697	78045698	chr16:78045698:G:A	rs67453771	G	A	g	Sox2_MA0143.3	13	0	-	0	0	.
chr16	78063076	78063077	chr16:78063077:A:C	rs12921704	A	C	c	Sox2_MA0143.3	-20	0	-	0	0	.
chr16	78063520	78063521	chr16:78063521:C:T	rs11646788	C	T	t	Sox2_MA0143.3	-17	0	+	0	0	.
chr16	78123212	78123213	chr16:78123213:A:T	rs140060915	A	T	A	Sox2_MA0143.3	-19	0	+	0	0	.
chr16	78168349	78168350	chr16:78168350:C:T	rs61747282	C	T	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr16	78184900	78184901	chr16:78184901:G:C	rs62033986	G	C	G	Sox2_MA0143.3	12	0	-	0	0	.
chr16	78199500	78199501	chr16:78199501:G:A	rs7192037	G	A	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr16	78216338	78216339	chr16:78216339:T:A	rs16947294	T	A	T	Sox2_MA0143.3	-6	0	+	0	0	.
chr16	78222144	78222145	chr16:78222145:G:A	rs13333436	G	A	G	Sox2_MA0143.3	0	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr16	78288760	78288761	chr16:78288761:A:G	rs11643583	A	G	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr16	78322325	78322326	chr16:78322326:C:G	rs62034372	C	G	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr16	78329482	78329483	chr16:78329483:C:T	rs8048594	C	T	T	Sox2_MA0143.3	-18	0	+	0	0	.
chr16	78368104	78368105	chr16:78368105:T:G	rs12917864	T	G	T	Sox2_MA0143.3	-2	0	+	0	0	.
chr16	78371392	78371393	chr16:78371393:A:G	rs72796037	A	G	A	Sox2_MA0143.3	8	0	+	0	0	.
chr16	78438538	78438539	chr16:78438539:G:A	rs9923680	G	A	G	Sox2_MA0143.3	8	0	+	0	0	.
chr16	78485882	78485883	chr16:78485883:G:A	rs2667577	G	A	A	Sox2_MA0143.3	7	1	-	9.206767037375712	9.800647049772198	CCTTTGTC
chr16	78492011	78492012	chr16:78492012:A:G	rs7192666	A	G	A	Sox2_MA0143.3	17	0	-	0	0	.
chr16	78597155	78597156	chr16:78597156:G:C	rs117134253	G	C	G	Sox2_MA0143.3	5	1	+	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr16	78633606	78633607	chr16:78633607:A:G	rs937103860	A	G	A	Sox2_MA0143.3	6	1	-	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr16	78648483	78648484	chr16:78648484:A:G	rs75530233	A	G	A	Sox2_MA0143.3	3	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr16	78665298	78665299	chr16:78665299:T:A	rs114468900	T	A	T	Sox2_MA0143.3	-20	0	+	0	0	.
chr16	78667797	78667798	chr16:78667798:C:T	rs17722137	C	T	C	Sox2_MA0143.3	21	0	+	0	0	.
chr16	78763185	78763186	chr16:78763186:G:A	rs4888844	G	A	A	Sox2_MA0143.3	14	0	+	0	0	.
chr16	78778246	78778247	chr16:78778247:G:C	rs17709285	G	C	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr16	78778254	78778255	chr16:78778255:T:G	rs74534224	T	G	T	Sox2_MA0143.3	2	1	+	8.864090315184848	2.5582713367092715	CCTTTGTG
chr16	78778272	78778273	chr16:78778273:A:G	rs185025651	A	G	A	Sox2_MA0143.3	20	0	+	0	0	.
chr16	78794631	78794632	chr16:78794632:C:G	rs764201359	C	G	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr16	78794647	78794648	chr16:78794648:C:T	rs9936415	C	T	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr16	78887225	78887226	chr16:78887226:C:G	rs75003906	C	G	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr16	78897122	78897123	chr16:78897123:G:A	rs12449222	G	A	G	Sox2_MA0143.3	14	0	+	0	0	.
chr16	78925342	78925343	chr16:78925343:A:G	rs59283096	A	G	A	Sox2_MA0143.3	15	0	-	0	0	.
chr16	78950406	78950407	chr16:78950407:C:G	rs1995547	C	G	C	Sox2_MA0143.3	22	0	+	0	0	.
chr16	78957093	78957094	chr16:78957094:G:T	rs17635971	G	T	G	Sox2_MA0143.3	26	0	+	0	0	.
chr16	78958644	78958645	chr16:78958645:A:G	rs10871358	A	G	A	Sox2_MA0143.3	7	1	-	9.800647049772198	9.206767037375712	CCTTTGTT
chr16	78988607	78988608	chr16:78988608:C:G	rs76656501	C	G	C	Sox2_MA0143.3	14	0	+	0	0	.
chr16	79001248	79001249	chr16:79001249:C:T	rs12598330	C	T	C	Sox2_MA0143.3	17	0	-	0	0	.
chr16	79001278	79001279	chr16:79001279:C:G	rs79706011	C	G	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr16	79006885	79006886	chr16:79006886:G:C	rs76923134	G	C	G	Sox2_MA0143.3	5	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr16	79006972	79006973	chr16:79006973:T:C	rs34982954	T	C	T	Sox2_MA0143.3	-8	0	+	0	0	.
chr16	79006987	79006988	chr16:79006988:C:T	rs12598700	C	T	C	Sox2_MA0143.3	7	1	+	9.206767037375712	9.800647049772198	CCTTTGTC
chr16	79015279	79015280	chr16:79015280:G:T	rs2550724	G	T	T	Sox2_MA0143.3	-8	0	-	0	0	.
chr16	79015382	79015383	chr16:79015383:C:A	rs9921664	C	A	A	Sox2_MA0143.3	-7	0	+	0	0	.
chr16	79028238	79028239	chr16:79028239:A:G	rs2656648	A	G	a	Sox2_MA0143.3	-20	0	+	0	0	.
chr16	79028245	79028246	chr16:79028246:A:G	rs7187331	A	G	g	Sox2_MA0143.3	-13	0	+	0	0	.
chr16	79029419	79029420	chr16:79029420:G:C	rs1862839	G	C	c	Sox2_MA0143.3	15	0	+	0	0	.
chr16	79068318	79068319	chr16:79068319:A:C	rs73570893	A	C	A	Sox2_MA0143.3	-11	0	+	0	0	.
chr16	79090434	79090435	chr16:79090435:C:G	rs35740112	C	G	C	Sox2_MA0143.3	25	0	-	0	0	.
chr16	79128918	79128919	chr16:79128919:T:C	rs8054312	T	C	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr16	79164831	79164832	chr16:79164832:C:G	rs16949745	C	G	C	Sox2_MA0143.3	20	0	+	0	0	.
chr16	79169292	79169293	chr16:79169293:T:C	rs1116525	T	C	C	Sox2_MA0143.3	14	0	-	0	0	.
chr16	79210198	79210199	chr16:79210199:T:A	rs11150144	T	A	A	Sox2_MA0143.3	3	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr16	79218426	79218427	chr16:79218427:C:T	rs270421	C	T	T	Sox2_MA0143.3	-20	0	+	0	0	.
chr16	79262388	79262389	chr16:79262389:A:C	rs79305185	A	C	A	Sox2_MA0143.3	2	1	-	9.206767037375712	2.900948058900136	CCTTTGTC
chr16	79262579	79262580	chr16:79262580:C:G	rs270436	C	G	G	Sox2_MA0143.3	5	1	-	9.019595766176417	2.110840986861197	CCATTGTC
chr16	79262771	79262772	chr16:79262772:C:G	rs270435	C	G	C	Sox2_MA0143.3	20	0	+	0	0	.
chr16	79310615	79310616	chr16:79310616:G:C	rs12600246	G	C	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr16	79415828	79415829	chr16:79415829:A:G	rs4499248	A	G	G	Sox2_MA0143.3	6	1	-	9.613475778572903	2.7047209992576837	CCATTGTT
chr16	79489395	79489396	chr16:79489396:T:A	rs2549502	T	A	A	Sox2_MA0143.3	23	0	+	0	0	.
chr16	79528243	79528244	chr16:79528244:C:T	rs10514459	C	T	T	Sox2_MA0143.3	-18	0	+	0	0	.
chr16	79542923	79542924	chr16:79542924:T:A	rs250138	T	A	T	Sox2_MA0143.3	-16	0	+	0	0	.
chr16	79645327	79645328	chr16:79645328:C:A	rs77316533	C	A	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr16	79647600	79647601	chr16:79647601:C:T	rs78559137	C	T	G	Sox2_MA0143.3	27	0	+	0	0	.
chr16	79659363	79659364	chr16:79659364:T:C	rs55862943	T	C	T	Sox2_MA0143.3	-20	0	+	0	0	.
chr16	79713957	79713958	chr16:79713958:A:G	rs73575083	A	G	A	Sox2_MA0143.3	3	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr16	79723860	79723861	chr16:79723861:G:A	rs62043341	G	A	G	Sox2_MA0143.3	22	0	+	0	0	.
chr16	79758166	79758167	chr16:79758167:G:T	rs9921624	G	T	G	Sox2_MA0143.3	26	0	-	0	0	.
chr16	79766699	79766700	chr16:79766700:T:C	rs4614737	T	C	T	Sox2_MA0143.3	3	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr16	79792591	79792592	chr16:79792592:T:G	rs4888047	T	G	T	Sox2_MA0143.3	24	0	+	0	0	.
chr16	79801950	79801951	chr16:79801951:T:C	rs74037488	T	C	T	Sox2_MA0143.3	-18	0	+	0	0	.
chr16	79959609	79959610	chr16:79959610:G:T	rs4889058	G	T	T	Sox2_MA0143.3	-3	0	-	0	0	.
chr16	79963742	79963743	chr16:79963743:T:G	rs16951797	T	G	G	Sox2_MA0143.3	10	0	+	0	0	.
chr16	79981443	79981444	chr16:79981444:C:G	rs4438317	C	G	G	Sox2_MA0143.3	25	0	-	0	0	.
chr16	79989943	79989944	chr16:79989944:A:G	rs10514476	A	G	A	Sox2_MA0143.3	-4	0	+	0	0	.
chr16	79989971	79989972	chr16:79989972:A:G	rs12926895	A	G	A	Sox2_MA0143.3	24	0	+	0	0	.
chr16	79994671	79994672	chr16:79994672:A:G	rs567203417	A	G	A	Sox2_MA0143.3	-12	0	+	0	0	.
chr16	80041781	80041782	chr16:80041782:A:C	rs74385653	A	C	A	Sox2_MA0143.3	-5	0	-	0	0	.
chr16	80190171	80190172	chr16:80190172:G:A	rs62049509	G	A	G	Sox2_MA0143.3	1	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr16	80198846	80198847	chr16:80198847:A:C	rs4889119	A	C	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr16	80261103	80261104	chr16:80261104:G:T	rs7189930	G	T	T	Sox2_MA0143.3	17	0	-	0	0	.
chr16	80274788	80274789	chr16:80274789:C:A	chr16:80274789:C:A	C	A	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr16	80274793	80274794	chr16:80274794:C:T	rs145865076	C	T	T	Sox2_MA0143.3	-3	0	+	0	0	.
chr16	80323413	80323414	chr16:80323414:C:G	rs186142902	C	G	C	Sox2_MA0143.3	16	0	+	0	0	.
chr16	80381861	80381862	chr16:80381862:C:T	rs1484031	C	T	C	Sox2_MA0143.3	17	0	-	0	0	.
chr16	80390486	80390487	chr16:80390487:T:C	rs12599282	T	C	T	Sox2_MA0143.3	-5	0	+	0	0	.
chr16	80390974	80390975	chr16:80390975:G:C	rs573255403	G	C	G	Sox2_MA0143.3	13	0	-	0	0	.
chr16	80391007	80391008	chr16:80391008:G:A	rs1106156	G	A	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr16	80466554	80466555	chr16:80466555:G:A	rs576774274	G	A	G	Sox2_MA0143.3	24	0	-	0	0	.
chr16	80466557	80466558	chr16:80466558:G:A	rs72820465	G	A	G	Sox2_MA0143.3	21	0	-	0	0	.
chr16	80466607	80466608	chr16:80466608:A:C	rs4396552	A	C	A	Sox2_MA0143.3	-20	0	+	0	0	.
chr16	80466621	80466622	chr16:80466622:T:G	rs4552040	T	G	T	Sox2_MA0143.3	-6	0	+	0	0	.
chr16	80466622	80466623	chr16:80466623:C:G	rs747117632	C	G	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr16	80466646	80466647	chr16:80466647:C:A	rs117328736	C	A	C	Sox2_MA0143.3	19	0	+	0	0	.
chr16	80466648	80466649	chr16:80466649:T:C	rs117824233	T	C	A	Sox2_MA0143.3	21	0	+	0	0	.
chr16	80554395	80554396	chr16:80554396:A:C	rs75011855	A	C	A	Sox2_MA0143.3	27	0	-	0	0	.
chr16	80570502	80570503	chr16:80570503:G:A	rs12924695	G	A	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr16	80574392	80574393	chr16:80574393:A:G	rs117488691	A	G	A	Sox2_MA0143.3	3	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr16	80583575	80583576	chr16:80583576:A:C	rs4547350	A	C	C	Sox2_MA0143.3	21	0	-	0	0	.
chr16	80583612	80583613	chr16:80583613:C:T	rs193092388	C	T	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr16	80583923	80583924	chr16:80583924:G:A	rs79926899	G	A	a	Sox2_MA0143.3	0	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr16	80586756	80586757	chr16:80586757:G:C	rs78257078	G	C	g	Sox2_MA0143.3	10	0	-	0	0	.
chr16	80602322	80602323	chr16:80602323:A:T	rs12932528	A	T	A	Sox2_MA0143.3	-15	0	-	0	0	.
chr16	80610238	80610239	chr16:80610239:G:C	rs77863998	G	C	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr16	80610475	80610476	chr16:80610476:C:T	rs7404848	C	T	T	Sox2_MA0143.3	-5	0	-	0	0	.
chr16	80639991	80639992	chr16:80639992:G:T	rs67421214	G	T	G	Sox2_MA0143.3	1	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr16	80712362	80712363	chr16:80712363:G:C	rs34405003	G	C	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr16	80718762	80718763	chr16:80718763:G:A	rs114332020	G	A	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr16	80803222	80803223	chr16:80803223:T:C	rs117035243	T	C	T	Sox2_MA0143.3	-1	0	+	0	0	.
chr16	80810105	80810106	chr16:80810106:T:C	rs74030467	T	C	T	Sox2_MA0143.3	-17	0	-	0	0	.
chr16	80825001	80825002	chr16:80825002:C:T	rs930275916	C	T	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr16	80825011	80825012	chr16:80825012:G:C	rs138370006	G	C	G	Sox2_MA0143.3	5	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr16	80841445	80841446	chr16:80841446:T:C	rs112418011	T	C	T	Sox2_MA0143.3	2	1	-	9.019595766176417	2.900948058900136	CCATTGTC
chr16	80927762	80927763	chr16:80927763:A:G	rs2161295	A	G	A	Sox2_MA0143.3	8	0	-	0	0	.
chr16	80930508	80930509	chr16:80930509:A:G	rs7185654	A	G	G	Sox2_MA0143.3	2	1	+	9.613475778572903	3.494828071296623	CCATTGTT
chr16	80938381	80938382	chr16:80938382:G:T	rs8054657	G	T	T	Sox2_MA0143.3	-8	0	-	0	0	.
chr16	80948435	80948436	chr16:80948436:C:T	rs140705116	C	T	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr16	80968879	80968880	chr16:80968880:A:G	rs35538366	A	G	A	Sox2_MA0143.3	-3	0	-	0	0	.
chr16	80994054	80994055	chr16:80994055:A:C	rs2602452	A	C	C	Sox2_MA0143.3	19	0	-	0	0	.
chr16	80994079	80994080	chr16:80994080:T:C	rs9939934	T	C	T	Sox2_MA0143.3	-6	0	-	0	0	.
chr16	81029931	81029932	chr16:81029932:C:T	rs7199631	C	T	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr16	81041800	81041801	chr16:81041801:A:G	rs71400136	A	G	A	Sox2_MA0143.3	2	1	-	8.864090315184848	2.5582713367092715	CCTTTGTG
chr16	81094600	81094601	chr16:81094601:G:T	rs6420421	G	T	T	Sox2_MA0143.3	25	0	+	0	0	.
chr16	81096888	81096889	chr16:81096889:A:G	rs8059692	A	G	G	Sox2_MA0143.3	8	0	-	0	0	.
chr16	81127276	81127277	chr16:81127277:G:A	rs34080377	G	A	G	Sox2_MA0143.3	7	1	+	8.864090315184848	3.5547341015215945	CCTTTGTG
chr16	81127358	81127359	chr16:81127359:C:T	rs138866204	C	T	C	Sox2_MA0143.3	26	0	+	0	0	.
chr16	81127359	81127360	chr16:81127360:G:T	rs35916084	G	T	G	Sox2_MA0143.3	27	0	+	0	0	.
chr16	81141089	81141090	chr16:81141090:A:G	rs74030547	A	G	A	Sox2_MA0143.3	16	0	-	0	0	.
chr16	81141092	81141093	chr16:81141093:A:G	rs12924312	A	G	G	Sox2_MA0143.3	13	0	-	0	0	.
chr16	81142487	81142488	chr16:81142488:T:C	rs140105099	T	C	-	Sox2_MA0143.3	20	0	+	0	0	.
chr16	81220849	81220850	chr16:81220850:G:A	rs10871407	G	A	G	Sox2_MA0143.3	14	0	+	0	0	.
chr16	81272658	81272659	chr16:81272659:A:C	rs4888133	A	C	a	Sox2_MA0143.3	2	1	-	3.5547341015215945	-2.751084876953981	CCTTTGTA
chr16	81333543	81333544	chr16:81333544:A:G	rs1035573	A	G	G	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr16	81389345	81389346	chr16:81389346:T:C	rs8062805	T	C	T	Sox2_MA0143.3	18	0	+	0	0	.
chr16	81431767	81431768	chr16:81431768:G:A	rs112471536	G	A	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr16	81443232	81443233	chr16:81443233:A:C	rs138294437	A	C	A	Sox2_MA0143.3	21	0	-	0	0	.
chr16	81443268	81443269	chr16:81443269:G:C	rs7193107	G	C	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr16	81448732	81448733	chr16:81448733:A:T	rs77318465	A	T	A	Sox2_MA0143.3	6	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr16	81448833	81448834	chr16:81448834:G:A	chr16:81448834:G:A	G	A	G	Sox2_MA0143.3	14	0	+	0	0	.
chr16	81456538	81456539	chr16:81456539:A:T	rs77700579	A	T	T	Sox2_MA0143.3	-5	0	+	0	0	.
chr16	81464101	81464102	chr16:81464102:T:C	rs2317240	T	C	T	Sox2_MA0143.3	11	0	+	0	0	.
chr16	81480014	81480015	chr16:81480015:A:T	rs2966080	A	T	A	Sox2_MA0143.3	-13	0	-	0	0	.
chr16	81492696	81492697	chr16:81492697:G:A	rs7193307	G	A	G	Sox2_MA0143.3	24	0	-	0	0	.
chr16	81493699	81493700	chr16:81493700:G:A	rs146814148	G	A	G	Sox2_MA0143.3	0	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr16	81560968	81560969	chr16:81560969:T:G	rs2317415	T	G	T	Sox2_MA0143.3	27	0	+	0	0	.
chr16	81568723	81568724	chr16:81568724:G:A	rs1298627121	G	A	G	Sox2_MA0143.3	1	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr16	81583191	81583192	chr16:81583192:A:G	rs115469173	A	G	A	Sox2_MA0143.3	-19	0	+	0	0	.
chr16	81647287	81647288	chr16:81647288:A:G	rs4888161	A	G	A	Sox2_MA0143.3	6	1	-	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr16	81655576	81655577	chr16:81655577:G:T	rs62043836	G	T	G	Sox2_MA0143.3	24	0	-	0	0	.
chr16	81692978	81692979	chr16:81692979:A:C	rs11642818	A	C	A	Sox2_MA0143.3	-7	0	+	0	0	.
chr16	81698221	81698222	chr16:81698222:C:T	rs4888166	C	T	c	Sox2_MA0143.3	-15	0	+	0	0	.
chr16	81698263	81698264	chr16:81698264:A:G	rs4889367	A	G	A	Sox2_MA0143.3	27	0	+	0	0	.
chr16	81842193	81842194	chr16:81842194:G:T	rs12600081	G	T	G	Sox2_MA0143.3	1	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr16	81842194	81842195	chr16:81842195:G:A	rs12600082	G	A	G	Sox2_MA0143.3	0	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr16	81854297	81854298	chr16:81854298:A:G	rs4072831	A	G	G	Sox2_MA0143.3	26	0	+	0	0	.
chr16	81875462	81875463	chr16:81875463:C:T	rs9940420	C	T	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr16	81881663	81881664	chr16:81881664:A:G	rs4889423	A	G	A	Sox2_MA0143.3	-12	0	+	0	0	.
chr16	81895921	81895922	chr16:81895922:C:G	rs13333716	C	G	C	Sox2_MA0143.3	10	0	+	0	0	.
chr16	81901660	81901661	chr16:81901661:C:A	chr16:81901661:C:A	C	A	C	Sox2_MA0143.3	19	0	+	0	0	.
chr16	81902565	81902566	chr16:81902566:T:A	rs4889437	T	A	a	Sox2_MA0143.3	6	1	+	9.613475778572903	2.7047209992576837	CCATTGTT
chr16	81923683	81923684	chr16:81923684:C:A	rs1296173553	C	A	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr16	81942358	81942359	chr16:81942359:T:G	rs16956034	T	G	T	Sox2_MA0143.3	-20	0	-	0	0	.
chr16	82062404	82062405	chr16:82062405:C:T	rs75930182	C	T	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr16	82108247	82108248	chr16:82108248:C:A	rs368951454	C	A	C	Sox2_MA0143.3	20	0	-	0	0	.
chr16	82136911	82136912	chr16:82136912:C:T	rs13330853	C	T	T	Sox2_MA0143.3	14	0	-	0	0	.
chr16	82170632	82170633	chr16:82170633:C:T	rs115221715	C	T	C	Sox2_MA0143.3	1	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr16	82188001	82188002	chr16:82188002:C:G	rs10514534	C	G	C	Sox2_MA0143.3	5	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr16	82188022	82188023	chr16:82188023:A:G	rs2911407	A	G	A	Sox2_MA0143.3	-16	0	-	0	0	.
chr16	82200130	82200131	chr16:82200131:A:G	rs2967396	A	G	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr16	82281102	82281103	chr16:82281103:G:A	rs12919173	G	A	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr16	82350793	82350794	chr16:82350794:G:A	rs1844714	G	A	A	Sox2_MA0143.3	17	0	+	0	0	.
chr16	82460947	82460948	chr16:82460948:G:A	rs9923305	G	A	A	Sox2_MA0143.3	-1	0	+	0	0	.
chr16	82460969	82460970	chr16:82460970:G:C	rs4783044	G	C	G	Sox2_MA0143.3	21	0	+	0	0	.
chr16	82503215	82503216	chr16:82503216:G:A	rs999569	G	A	G	Sox2_MA0143.3	7	1	+	8.676919043985553	3.3675628303222993	CCATTGTG
chr16	82539962	82539963	chr16:82539963:T:A	rs8182204	T	A	A	Sox2_MA0143.3	-8	0	-	0	0	.
chr16	82539965	82539966	chr16:82539966:C:G	rs8182180	C	G	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr16	82544441	82544442	chr16:82544442:C:T	rs17243500	C	T	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr16	82546791	82546792	chr16:82546792:C:G	rs11863621	C	G	C	Sox2_MA0143.3	5	1	-	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr16	82579544	82579545	chr16:82579545:A:G	rs3852715	A	G	A	Sox2_MA0143.3	-15	0	-	0	0	.
chr16	82612488	82612489	chr16:82612489:A:C	rs3852724	A	C	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr16	82654831	82654832	chr16:82654832:A:G	rs11864864	A	G	A	Sox2_MA0143.3	-2	0	-	0	0	.
chr16	82657948	82657949	chr16:82657949:A:G	rs76382045	A	G	A	Sox2_MA0143.3	16	0	-	0	0	.
chr16	82657958	82657959	chr16:82657959:A:G	rs3910222	A	G	G	Sox2_MA0143.3	6	1	-	9.613475778572903	2.7047209992576837	CCATTGTT
chr16	82663987	82663988	chr16:82663988:T:C	rs8182105	T	C	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr16	82677263	82677264	chr16:82677264:C:T	rs1564029	C	T	C	Sox2_MA0143.3	23	0	+	0	0	.
chr16	82700740	82700741	chr16:82700741:A:G	rs11860763	A	G	G	Sox2_MA0143.3	4	1	-	8.864090315184848	1.9553355358696274	CCTTTGTG
chr16	82700758	82700759	chr16:82700759:T:C	rs9788842	T	C	T	Sox2_MA0143.3	-14	0	-	0	0	.
chr16	82769866	82769867	chr16:82769867:G:A	rs1075796	G	A	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr16	82793174	82793175	chr16:82793175:C:T	rs4783274	C	T	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr16	82867763	82867764	chr16:82867764:T:A	rs9319576	T	A	A	Sox2_MA0143.3	16	0	-	0	0	.
chr16	82867771	82867772	chr16:82867772:C:T	rs72790103	C	T	c	Sox2_MA0143.3	8	0	-	0	0	.
chr16	82952918	82952919	chr16:82952919:C:G	rs117472693	C	G	C	Sox2_MA0143.3	11	0	-	0	0	.
chr16	83036025	83036026	chr16:83036026:A:G	rs4329910	A	G	A	Sox2_MA0143.3	27	0	-	0	0	.
chr16	83100569	83100570	chr16:83100570:A:G	rs72798333	A	G	A	Sox2_MA0143.3	3	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr16	83154146	83154147	chr16:83154147:C:T	rs7194770	C	T	T	Sox2_MA0143.3	-11	0	+	0	0	.
chr16	83156423	83156424	chr16:83156424:T:G	rs77876646	T	G	T	Sox2_MA0143.3	27	0	-	0	0	.
chr16	83308475	83308476	chr16:83308476:T:C	rs6420380	T	C	T	Sox2_MA0143.3	23	0	-	0	0	.
chr16	83373243	83373244	chr16:83373244:G:A	rs12444914	G	A	G	Sox2_MA0143.3	15	0	-	0	0	.
chr16	83424855	83424856	chr16:83424856:C:G	chr16:83424856:C:G	C	G	C	Sox2_MA0143.3	1	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr16	83445541	83445542	chr16:83445542:G:A	rs12446118	G	A	A	Sox2_MA0143.3	17	0	-	0	0	.
chr16	83678829	83678830	chr16:83678830:A:G	rs3784943	A	G	A	Sox2_MA0143.3	9	0	-	0	0	.
chr16	83691286	83691287	chr16:83691287:A:G	rs6563969	A	G	A	Sox2_MA0143.3	8	0	-	0	0	.
chr16	83714490	83714491	chr16:83714491:G:A	rs72797282	G	A	G	Sox2_MA0143.3	11	0	-	0	0	.
chr16	83714516	83714517	chr16:83714517:A:G	rs254325	A	G	A	Sox2_MA0143.3	-15	0	-	0	0	.
chr16	83744747	83744748	chr16:83744748:C:T	rs56233754	C	T	C	Sox2_MA0143.3	23	0	+	0	0	.
chr16	83749228	83749229	chr16:83749229:A:C	rs187602	A	C	A	Sox2_MA0143.3	14	0	+	0	0	.
chr16	83769291	83769292	chr16:83769292:T:A	rs78245379	T	A	T	Sox2_MA0143.3	-18	0	-	0	0	.
chr16	83858907	83858908	chr16:83858908:G:A	rs7200581	G	A	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr16	83900119	83900120	chr16:83900120:C:T	rs138557781	C	T	C	Sox2_MA0143.3	27	0	-	0	0	.
chr16	83900128	83900129	chr16:83900129:C:T	rs112192905	C	T	C	Sox2_MA0143.3	18	0	-	0	0	.
chr16	83915900	83915901	chr16:83915901:T:C	rs1127382	T	C	C	Sox2_MA0143.3	6	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr16	83936277	83936278	chr16:83936278:G:A	rs9889086	G	A	a	Sox2_MA0143.3	15	0	-	0	0	.
chr16	83949064	83949065	chr16:83949065:G:A	rs2432561	G	A	g	Sox2_MA0143.3	22	0	+	0	0	.
chr16	83954392	83954393	chr16:83954393:C:T	rs907034	C	T	C	Sox2_MA0143.3	18	0	+	0	0	.
chr16	83963550	83963551	chr16:83963551:C:G	rs62045921	C	G	C	Sox2_MA0143.3	24	0	+	0	0	.
chr16	83995663	83995664	chr16:83995664:C:T	rs79108045	C	T	C	Sox2_MA0143.3	0	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr16	84034826	84034827	chr16:84034827:T:C	rs11639584	T	C	T	Sox2_MA0143.3	6	1	+	9.206767037375712	2.298012258060492	CCTTTGTC
chr16	84081046	84081047	chr16:84081047:T:G	rs12929729	T	G	G	Sox2_MA0143.3	18	0	-	0	0	.
chr16	84090300	84090301	chr16:84090301:C:T	rs3785021	C	T	c	Sox2_MA0143.3	23	0	-	0	0	.
chr16	84175400	84175401	chr16:84175401:A:T	rs114472191	A	T	A	Sox2_MA0143.3	10	0	-	0	0	.
chr16	84193612	84193613	chr16:84193613:G:T	rs970713402	G	T	G	Sox2_MA0143.3	25	0	+	0	0	.
chr16	84197239	84197240	chr16:84197240:T:G	rs74336734	T	G	t	Sox2_MA0143.3	8	0	+	0	0	.
chr16	84252255	84252256	chr16:84252256:C:A	rs7190826	C	A	C	Sox2_MA0143.3	24	0	+	0	0	.
chr16	84265177	84265178	chr16:84265178:A:T	rs244855	A	T	A	Sox2_MA0143.3	-3	0	-	0	0	.
chr16	84283777	84283778	chr16:84283778:T:G	rs13330884	T	G	T	Sox2_MA0143.3	-14	0	+	0	0	.
chr16	84302107	84302108	chr16:84302108:A:C	rs244833	A	C	A	Sox2_MA0143.3	6	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr16	84357546	84357547	chr16:84357547:C:T	rs569248378	C	T	T	Sox2_MA0143.3	-12	0	+	0	0	.
chr16	84367243	84367244	chr16:84367244:C:T	rs8063863	C	T	C	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr16	84397174	84397175	chr16:84397175:T:C	rs9929758	T	C	T	Sox2_MA0143.3	9	0	+	0	0	.
chr16	84416498	84416499	chr16:84416499:T:G	rs62050869	T	G	T	Sox2_MA0143.3	17	0	-	0	0	.
chr16	84443213	84443214	chr16:84443214:G:A	rs117095627	G	A	G	Sox2_MA0143.3	0	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr16	84461694	84461695	chr16:84461695:C:G	rs12931468	C	G	C	Sox2_MA0143.3	1	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr16	84507274	84507275	chr16:84507275:T:C	rs16974000	T	C	t	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr16	84507275	84507276	chr16:84507276:T:C	rs148207631	T	C	T	Sox2_MA0143.3	4	1	+	8.676919043985553	1.7681642646703322	CCATTGTG
chr16	84508265	84508266	chr16:84508266:G:C	rs8054207	G	C	G	Sox2_MA0143.3	22	0	-	0	0	.
chr16	84508286	84508287	chr16:84508287:G:A	rs11149667	G	A	G	Sox2_MA0143.3	1	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr16	84515066	84515067	chr16:84515067:C:T	rs931075	C	T	C	Sox2_MA0143.3	19	0	+	0	0	.
chr16	84531888	84531889	chr16:84531889:A:G	rs429995	A	G	A	Sox2_MA0143.3	8	0	+	0	0	.
chr16	84532135	84532136	chr16:84532136:T:G	rs13330564	T	G	T	Sox2_MA0143.3	-14	0	-	0	0	.
chr16	84543584	84543585	chr16:84543585:T:A	rs62048653	T	A	T	Sox2_MA0143.3	16	0	-	0	0	.
chr16	84558975	84558976	chr16:84558976:C:T	rs62050681	C	T	C	Sox2_MA0143.3	11	0	-	0	0	.
chr16	84566988	84566989	chr16:84566989:T:C	rs12929880	T	C	T	Sox2_MA0143.3	-19	0	-	0	0	.
chr16	84597661	84597662	chr16:84597662:T:C	rs2018540	T	C	T	Sox2_MA0143.3	23	0	-	0	0	.
chr16	84597665	84597666	chr16:84597666:G:C	rs56136433	G	C	G	Sox2_MA0143.3	19	0	-	0	0	.
chr16	84597693	84597694	chr16:84597694:A:G	rs934166	A	G	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr16	84603071	84603072	chr16:84603072:T:C	rs12149119	T	C	T	Sox2_MA0143.3	10	0	-	0	0	.
chr16	84684432	84684433	chr16:84684433:C:G	rs9888964	C	G	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr16	84719533	84719534	chr16:84719534:G:C	rs16974437	G	C	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr16	84738927	84738928	chr16:84738928:G:A	rs36081182	G	A	A	Sox2_MA0143.3	-13	0	+	0	0	.
chr16	84742714	84742715	chr16:84742715:G:A	rs114692598	G	A	G	Sox2_MA0143.3	-11	0	+	0	0	.
chr16	84742736	84742737	chr16:84742737:G:C	rs115065800	G	C	G	Sox2_MA0143.3	11	0	+	0	0	.
chr16	84822356	84822357	chr16:84822357:A:G	rs8057998	A	G	G	Sox2_MA0143.3	8	0	+	0	0	.
chr16	84882280	84882281	chr16:84882281:T:C	rs2646104	T	C	T	Sox2_MA0143.3	-10	0	-	0	0	.
chr16	84922804	84922805	chr16:84922805:C:G	rs2641675	C	G	C	Sox2_MA0143.3	20	0	+	0	0	.
chr16	84940629	84940630	chr16:84940630:G:C	rs9939014	G	C	G	Sox2_MA0143.3	7	1	-	9.206767037375712	8.864090315184848	CCTTTGTC
chr16	84952911	84952912	chr16:84952912:G:C	rs141441114	G	C	G	Sox2_MA0143.3	-16	0	-	0	0	.
chr16	85003967	85003968	chr16:85003968:C:G	rs34776984	C	G	C	Sox2_MA0143.3	27	0	-	0	0	.
chr16	85016853	85016854	chr16:85016854:G:A	rs74563620	G	A	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr16	85056633	85056634	chr16:85056634:G:C	rs9939449	G	C	G	Sox2_MA0143.3	-9	0	+	0	0	.
chr16	85056650	85056651	chr16:85056651:C:T	rs62049872	C	T	C	Sox2_MA0143.3	8	0	+	0	0	.
chr16	85124084	85124085	chr16:85124085:G:A	rs112316511	G	A	G	Sox2_MA0143.3	22	0	-	0	0	.
chr16	85127480	85127481	chr16:85127481:C:T	rs79712541	C	T	C	Sox2_MA0143.3	11	0	-	0	0	.
chr16	85167874	85167875	chr16:85167875:T:A	rs111988170	T	A	T	Sox2_MA0143.3	-19	0	+	0	0	.
chr16	85190844	85190845	chr16:85190845:T:G	rs11866796	T	G	T	Sox2_MA0143.3	-16	0	-	0	0	.
chr16	85234913	85234914	chr16:85234914:T:C	rs181926639	T	C	T	Sox2_MA0143.3	-17	0	-	0	0	.
chr16	85258869	85258870	chr16:85258870:A:G	rs9922374	A	G	G	Sox2_MA0143.3	2	1	+	9.613475778572903	3.494828071296623	CCATTGTT
chr16	85287539	85287540	chr16:85287540:C:T	rs117751858	C	T	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr16	85288985	85288986	chr16:85288986:C:G	rs12443900	C	G	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr16	85290163	85290164	chr16:85290164:G:A	rs72807761	G	A	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr16	85290679	85290680	chr16:85290680:C:G	rs34771532	C	G	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr16	85291334	85291335	chr16:85291335:G:A	rs773041713	G	A	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr16	85309823	85309824	chr16:85309824:G:A	rs148575451	G	A	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr16	85309847	85309848	chr16:85309848:G:A	chr16:85309848:G:A	G	A	G	Sox2_MA0143.3	11	0	+	0	0	.
chr16	85328637	85328638	chr16:85328638:A:G	rs2966839	A	G	G	Sox2_MA0143.3	-9	0	+	0	0	.
chr16	85330491	85330492	chr16:85330492:T:C	rs10871292	T	C	C	Sox2_MA0143.3	3	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr16	85330492	85330493	chr16:85330493:T:C	rs10871293	T	C	T	Sox2_MA0143.3	4	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr16	85336277	85336278	chr16:85336278:C:T	rs113113760	C	T	C	Sox2_MA0143.3	8	0	+	0	0	.
chr16	85395428	85395429	chr16:85395429:C:A	chr16:85395429:C:A	C	A	C	Sox2_MA0143.3	8	0	-	0	0	.
chr16	85453332	85453333	chr16:85453333:G:C	rs1385035	G	C	G	Sox2_MA0143.3	25	0	-	0	0	.
chr16	85453373	85453374	chr16:85453374:C:A	rs1385036	C	A	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr16	85476587	85476588	chr16:85476588:C:T	rs12918171	C	T	T	Sox2_MA0143.3	24	0	+	0	0	.
chr16	85520846	85520847	chr16:85520847:G:C	rs1029383443	G	C	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr16	85527446	85527447	chr16:85527447:A:G	rs10863206	A	G	A	Sox2_MA0143.3	6	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr16	85530966	85530967	chr16:85530967:T:G	rs7195591	T	G	G	Sox2_MA0143.3	24	0	+	0	0	.
chr16	85553347	85553348	chr16:85553348:G:T	rs561754922	G	T	G	Sox2_MA0143.3	23	0	-	0	0	.
chr16	85588780	85588781	chr16:85588781:G:C	rs76831558	G	C	G	Sox2_MA0143.3	12	0	+	0	0	.
chr16	85632519	85632520	chr16:85632520:A:G	rs8056287	A	G	A	Sox2_MA0143.3	3	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr16	85696594	85696595	chr16:85696595:A:G	rs6540028	A	G	A	Sox2_MA0143.3	9	0	-	0	0	.
chr16	85812755	85812756	chr16:85812756:G:A	rs141517016	G	A	G	Sox2_MA0143.3	1	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr16	85833432	85833433	chr16:85833433:G:A	rs7195961	G	A	G	Sox2_MA0143.3	23	0	+	0	0	.
chr16	85969586	85969587	chr16:85969587:C:T	rs9940596	C	T	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr16	85971923	85971924	chr16:85971924:A:G	rs12925306	A	G	A	Sox2_MA0143.3	7	1	+	3.5547341015215945	8.864090315184848	CCTTTGTA
chr16	85971941	85971942	chr16:85971942:A:G	rs4843878	A	G	a	Sox2_MA0143.3	25	0	+	0	0	.
chr16	86042738	86042739	chr16:86042739:G:T	rs1568389	G	T	T	Sox2_MA0143.3	-6	0	+	0	0	.
chr16	86044030	86044031	chr16:86044031:G:A	rs4843335	G	A	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr16	86044258	86044259	chr16:86044259:C:G	rs375124088	C	G	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr16	86067266	86067267	chr16:86067267:A:C	rs9937643	A	C	C	Sox2_MA0143.3	20	0	+	0	0	.
chr16	86083393	86083394	chr16:86083394:C:T	rs55837270	C	T	C	Sox2_MA0143.3	26	0	-	0	0	.
chr16	86084258	86084259	chr16:86084259:T:A	rs6540254	T	A	A	Sox2_MA0143.3	17	0	-	0	0	.
chr16	86084289	86084290	chr16:86084290:C:T	rs7498296	C	T	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr16	86086300	86086301	chr16:86086301:T:C	rs4843902	T	C	T	Sox2_MA0143.3	9	0	+	0	0	.
chr16	86088680	86088681	chr16:86088681:A:G	rs28376425	A	G	A	Sox2_MA0143.3	3	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr16	86101898	86101899	chr16:86101899:T:G	rs8055308	T	G	G	Sox2_MA0143.3	6	1	+	9.206767037375712	2.298012258060492	CCTTTGTC
chr16	86101917	86101918	chr16:86101918:G:T	rs75352685	G	T	G	Sox2_MA0143.3	25	0	+	0	0	.
chr16	86116227	86116228	chr16:86116228:C:T	rs74034283	C	T	C	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr16	86153927	86153928	chr16:86153928:G:T	rs2047397	G	T	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr16	86181530	86181531	chr16:86181531:C:T	rs11640208	C	T	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr16	86206021	86206022	chr16:86206022:A:T	rs79749738	A	T	A	Sox2_MA0143.3	23	0	+	0	0	.
chr16	86227105	86227106	chr16:86227106:C:T	rs11648297	C	T	C	Sox2_MA0143.3	1	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr16	86227114	86227115	chr16:86227115:T:C	rs17833133	T	C	T	Sox2_MA0143.3	10	0	+	0	0	.
chr16	86240904	86240905	chr16:86240905:T:C	chr16:86240905:T:C	T	C	T	Sox2_MA0143.3	3	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr16	86243106	86243107	chr16:86243107:T:A	rs34934359	T	A	T	Sox2_MA0143.3	18	0	+	0	0	.
chr16	86247930	86247931	chr16:86247931:A:G	rs1032596	A	G	A	Sox2_MA0143.3	-15	0	-	0	0	.
chr16	86253143	86253144	chr16:86253144:G:A	rs1704491	G	A	G	Sox2_MA0143.3	22	0	+	0	0	.
chr16	86274007	86274008	chr16:86274008:A:C	rs76515677	A	C	A	Sox2_MA0143.3	-19	0	+	0	0	.
chr16	86306474	86306475	chr16:86306475:C:T	rs2665315	C	T	T	Sox2_MA0143.3	7	1	-	8.676919043985553	3.3675628303222993	CCATTGTG
chr16	86341219	86341220	chr16:86341220:C:A	rs117746047	C	A	C	Sox2_MA0143.3	5	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr16	86347399	86347400	chr16:86347400:C:G	rs2451861	C	G	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr16	86377635	86377636	chr16:86377636:G:A	rs62052940	G	A	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr16	86394311	86394312	chr16:86394312:G:C	rs3111607	G	C	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr16	86405767	86405768	chr16:86405768:G:A	rs12935509	G	A	G	Sox2_MA0143.3	23	0	-	0	0	.
chr16	86462472	86462473	chr16:86462473:T:C	rs1417408596	T	C	T	Sox2_MA0143.3	-3	0	+	0	0	.
chr16	86477841	86477842	chr16:86477842:G:C	rs13336977	G	C	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr16	86477877	86477878	chr16:86477878:G:C	rs889594	G	C	G	Sox2_MA0143.3	18	0	+	0	0	.
chr16	86516986	86516987	chr16:86516987:G:A	rs77016339	G	A	G	Sox2_MA0143.3	22	0	-	0	0	.
chr16	86520417	86520418	chr16:86520418:T:G	rs6540308	T	G	T	Sox2_MA0143.3	23	0	+	0	0	.
chr16	86526089	86526090	chr16:86526090:A:G	rs774491244	A	G	a	Sox2_MA0143.3	2	1	-	9.206767037375712	2.900948058900136	CCTTTGTC
chr16	86540828	86540829	chr16:86540829:C:G	rs79171950	C	G	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr16	86554173	86554174	chr16:86554174:C:G	rs181173527	C	G	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr16	86554215	86554216	chr16:86554216:C:T	rs115642303	C	T	C	Sox2_MA0143.3	22	0	+	0	0	.
chr16	86575090	86575091	chr16:86575091:G:C	rs11861341	G	C	G	Sox2_MA0143.3	12	0	-	0	0	.
chr16	86583279	86583280	chr16:86583280:G:A	rs12711457	G	A	A	Sox2_MA0143.3	1	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr16	86593655	86593656	chr16:86593656:C:T	rs1424017	C	T	T	Sox2_MA0143.3	18	0	+	0	0	.
chr16	86607228	86607229	chr16:86607229:A:G	rs12711459	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr16	86664662	86664663	chr16:86664663:G:A	rs75215708	G	A	G	Sox2_MA0143.3	15	0	+	0	0	.
chr16	86668551	86668552	chr16:86668552:C:T	rs7186373	C	T	C	Sox2_MA0143.3	7	1	+	9.019595766176417	9.613475778572903	CCATTGTC
chr16	86732150	86732151	chr16:86732151:C:T	rs75133568	C	T	c	Sox2_MA0143.3	5	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr16	86783934	86783935	chr16:86783935:T:C	rs531893524	T	C	T	Sox2_MA0143.3	13	0	-	0	0	.
chr16	86793881	86793882	chr16:86793882:G:T	rs13332515	G	T	G	Sox2_MA0143.3	11	0	-	0	0	.
chr16	86796923	86796924	chr16:86796924:T:C	rs7404980	T	C	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr16	86818881	86818882	chr16:86818882:C:T	rs72808457	C	T	C	Sox2_MA0143.3	10	0	+	0	0	.
chr16	86855082	86855083	chr16:86855083:T:C	rs578124425	T	C	T	Sox2_MA0143.3	-13	0	+	0	0	.
chr16	86855335	86855336	chr16:86855336:G:A	rs78842047	G	A	G	Sox2_MA0143.3	8	0	-	0	0	.
chr16	86868456	86868457	chr16:86868457:T:G	rs114419279	T	G	T	Sox2_MA0143.3	23	0	+	0	0	.
chr16	86868578	86868579	chr16:86868579:A:G	rs116564584	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr16	86879280	86879281	chr16:86879281:A:G	rs12149188	A	G	A	Sox2_MA0143.3	-8	0	+	0	0	.
chr16	86887923	86887924	chr16:86887924:C:T	rs11641193	C	T	C	Sox2_MA0143.3	25	0	-	0	0	.
chr16	86895722	86895723	chr16:86895723:A:G	rs7186606	A	G	A	Sox2_MA0143.3	24	0	-	0	0	.
chr16	86919470	86919471	chr16:86919471:T:C	rs8045520	T	C	T	Sox2_MA0143.3	-16	0	+	0	0	.
chr16	86951993	86951994	chr16:86951994:C:T	rs75092194	C	T	C	Sox2_MA0143.3	26	0	-	0	0	.
chr16	86988162	86988163	chr16:86988163:C:T	rs145209184	C	T	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr16	87017718	87017719	chr16:87017719:C:G	rs16942492	C	G	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr16	87045933	87045934	chr16:87045934:A:T	rs4378618	A	T	A	Sox2_MA0143.3	-13	0	-	0	0	.
chr16	87142265	87142266	chr16:87142266:G:C	rs116962691	G	C	G	Sox2_MA0143.3	21	0	+	0	0	.
chr16	87150759	87150760	chr16:87150760:G:A	rs11865182	G	A	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr16	87154104	87154105	chr16:87154105:T:C	rs3844495	T	C	C	Sox2_MA0143.3	23	0	-	0	0	.
chr16	87186629	87186630	chr16:87186630:C:T	rs78252350	C	T	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr16	87186659	87186660	chr16:87186660:T:C	rs74037599	T	C	T	Sox2_MA0143.3	13	0	+	0	0	.
chr16	87204931	87204932	chr16:87204932:G:C	rs9939467	G	C	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr16	87239736	87239737	chr16:87239737:G:C	rs142865979	G	C	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr16	87319044	87319045	chr16:87319045:A:G	rs79302402	A	G	A	Sox2_MA0143.3	-3	0	-	0	0	.
chr16	87396632	87396633	chr16:87396633:C:T	rs7204722	C	T	T	Sox2_MA0143.3	15	0	-	0	0	.
chr16	87397037	87397038	chr16:87397038:G:A	rs116843035	G	A	G	Sox2_MA0143.3	12	0	+	0	0	.
chr16	87458220	87458221	chr16:87458221:G:A	rs4075226	G	A	G	Sox2_MA0143.3	8	0	-	0	0	.
chr16	87476111	87476112	chr16:87476112:G:A	rs35808515	G	A	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr16	87480987	87480988	chr16:87480988:C:T	rs12103004	C	T	T	Sox2_MA0143.3	-17	0	-	0	0	.
chr16	87487861	87487862	chr16:87487862:C:T	rs551591588	C	T	C	Sox2_MA0143.3	26	0	-	0	0	.
chr16	87491130	87491131	chr16:87491131:T:C	chr16:87491131:T:C	T	C	T	Sox2_MA0143.3	-4	0	-	0	0	.
chr16	87506853	87506854	chr16:87506854:G:T	rs568444081	G	T	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr16	87525577	87525578	chr16:87525578:A:G	chr16:87525578:A:G	A	G	a	Sox2_MA0143.3	-5	0	+	0	0	.
chr16	87540385	87540386	chr16:87540386:T:A	rs112177215	T	A	T	Sox2_MA0143.3	20	0	+	0	0	.
chr16	87546263	87546264	chr16:87546264:A:G	rs4081947	A	G	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr16	87570591	87570592	chr16:87570592:G:A	rs16943052	G	A	G	Sox2_MA0143.3	27	0	+	0	0	.
chr16	87582503	87582504	chr16:87582504:G:A	rs550449314	G	A	G	Sox2_MA0143.3	12	0	-	0	0	.
chr16	87582530	87582531	chr16:87582531:G:C	rs115670574	G	C	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr16	87654007	87654008	chr16:87654008:T:C	rs9940076	T	C	T	Sox2_MA0143.3	4	1	+	8.676919043985553	1.7681642646703322	CCATTGTG
chr16	87657863	87657864	chr16:87657864:C:A	rs188496167	C	A	C	Sox2_MA0143.3	27	0	-	0	0	.
chr16	87682801	87682802	chr16:87682802:T:A	rs28524800	T	A	A	Sox2_MA0143.3	3	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr16	87704012	87704013	chr16:87704013:G:A	rs1469454	G	A	G	Sox2_MA0143.3	8	0	-	0	0	.
chr16	87704021	87704022	chr16:87704022:C:G	rs36047817	C	G	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr16	87706642	87706643	chr16:87706643:C:G	chr16:87706643:C:G	C	G	-	Sox2_MA0143.3	-17	0	-	0	0	.
chr16	87709069	87709070	chr16:87709070:C:T	rs60515490	C	T	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr16	87712775	87712776	chr16:87712776:C:T	rs1274549828	C	T	C	Sox2_MA0143.3	12	0	-	0	0	.
chr16	87712806	87712807	chr16:87712807:C:T	rs11859475	C	T	T	Sox2_MA0143.3	-19	0	-	0	0	.
chr16	87716625	87716626	chr16:87716626:G:T	rs62055570	G	T	G	Sox2_MA0143.3	16	0	+	0	0	.
chr16	87725590	87725591	chr16:87725591:T:G	rs72812203	T	G	T	Sox2_MA0143.3	-20	0	-	0	0	.
chr16	87815296	87815297	chr16:87815297:T:C	rs9921866	T	C	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr16	87820730	87820731	chr16:87820731:A:G	rs12598848	A	G	a	Sox2_MA0143.3	19	0	-	0	0	.
chr16	87854349	87854350	chr16:87854350:A:G	rs116639166	A	G	A	Sox2_MA0143.3	3	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr16	87870619	87870620	chr16:87870620:G:A	rs33988046	G	A	G	Sox2_MA0143.3	18	0	+	0	0	.
chr16	87871796	87871797	chr16:87871797:A:G	rs7192381	A	G	A	Sox2_MA0143.3	9	0	-	0	0	.
chr16	87954354	87954355	chr16:87954355:T:G	rs72628302	T	G	t	Sox2_MA0143.3	2	1	+	9.800647049772198	3.494828071296623	CCTTTGTT
chr16	87956737	87956738	chr16:87956738:G:A	rs143832724	G	A	g	Sox2_MA0143.3	-20	0	+	0	0	.
chr16	87956745	87956746	chr16:87956746:C:T	rs116853472	C	T	c	Sox2_MA0143.3	-12	0	+	0	0	.
chr16	87972220	87972221	chr16:87972221:A:G	rs11647195	A	G	g	Sox2_MA0143.3	-15	0	+	0	0	.
chr16	88034978	88034979	chr16:88034979:G:T	rs144823855	G	T	a	Sox2_MA0143.3	-19	0	+	0	0	.
chr16	88039373	88039374	chr16:88039374:C:T	rs1234703392	C	T	C	Sox2_MA0143.3	20	0	+	0	0	.
chr16	88056561	88056562	chr16:88056562:C:T	rs9930033	C	T	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr16	88075620	88075621	chr16:88075621:T:C	rs12927165	T	C	C	Sox2_MA0143.3	19	0	+	0	0	.
chr16	88113372	88113373	chr16:88113373:T:C	rs7498963	T	C	-	Sox2_MA0143.3	-11	0	+	0	0	.
chr16	88128597	88128598	chr16:88128598:T:C	rs7500124	T	C	-	Sox2_MA0143.3	26	0	+	0	0	.
chr16	88189293	88189294	chr16:88189294:T:C	rs7500976	T	C	-	Sox2_MA0143.3	13	0	-	0	0	.
chr16	88195638	88195639	chr16:88195639:G:A	rs116204477	G	A	-	Sox2_MA0143.3	27	0	-	0	0	.
chr16	88241038	88241039	chr16:88241039:T:A	chr16:88241039:T:A	T	A	-	Sox2_MA0143.3	4	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr16	88245860	88245861	chr16:88245861:G:T	chr16:88245861:G:T	G	T	-	Sox2_MA0143.3	19	0	-	0	0	.
chr16	88245868	88245869	chr16:88245869:C:T	rs756059892	C	T	-	Sox2_MA0143.3	11	0	-	0	0	.
chr16	88245897	88245898	chr16:88245898:G:A	rs72820543	G	A	-	Sox2_MA0143.3	-18	0	-	0	0	.
chr16	88248894	88248895	chr16:88248895:G:C	rs13339222	G	C	-	Sox2_MA0143.3	27	0	+	0	0	.
chr16	88264663	88264664	chr16:88264664:G:A	rs11864838	G	A	-	Sox2_MA0143.3	-6	0	+	0	0	.
chr16	88264691	88264692	chr16:88264692:A:G	rs373024345	A	G	-	Sox2_MA0143.3	22	0	+	0	0	.
chr16	88300557	88300558	chr16:88300558:G:C	rs570485124	G	C	G	Sox2_MA0143.3	26	0	-	0	0	.
chr16	88307311	88307312	chr16:88307312:C:T	rs8050917	C	T	C	Sox2_MA0143.3	19	0	-	0	0	.
chr16	88307312	88307313	chr16:88307313:G:A	rs112828826	G	A	G	Sox2_MA0143.3	18	0	-	0	0	.
chr16	88307314	88307315	chr16:88307315:T:C	rs6603048	T	C	T	Sox2_MA0143.3	16	0	-	0	0	.
chr16	88308824	88308825	chr16:88308825:C:A	rs10445189	C	A	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr16	88331862	88331863	chr16:88331863:T:C	rs13335621	T	C	T	Sox2_MA0143.3	15	0	+	0	0	.
chr16	88351570	88351571	chr16:88351571:G:C	rs77905370	G	C	g	Sox2_MA0143.3	23	0	-	0	0	.
chr16	88485017	88485018	chr16:88485018:C:G	rs16966535	C	G	c	Sox2_MA0143.3	-20	0	+	0	0	.
chr16	88485056	88485057	chr16:88485057:T:C	rs3859027	T	C	C	Sox2_MA0143.3	19	0	+	0	0	.
chr16	88529340	88529341	chr16:88529341:A:G	rs9302772	A	G	A	Sox2_MA0143.3	-18	0	+	0	0	.
chr16	88549811	88549812	chr16:88549812:G:A	rs547789852	G	A	G	Sox2_MA0143.3	8	0	-	0	0	.
chr16	88570430	88570431	chr16:88570431:G:C	rs79241464	G	C	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr16	88570434	88570435	chr16:88570435:T:C	chr16:88570435:T:C	T	C	t	Sox2_MA0143.3	-18	0	-	0	0	.
chr16	88570434	88570435	chr16:88570435:T:G	rs923669812	T	G	t	Sox2_MA0143.3	-18	0	-	0	0	.
chr16	88580371	88580372	chr16:88580372:A:G	rs7199736	A	G	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr16	88583177	88583178	chr16:88583178:T:C	rs4782499	T	C	T	Sox2_MA0143.3	20	0	+	0	0	.
chr16	88614446	88614447	chr16:88614447:A:T	rs4782380	A	T	A	Sox2_MA0143.3	-17	0	+	0	0	.
chr16	88644473	88644474	chr16:88644474:T:C	rs3794622	T	C	C	Sox2_MA0143.3	15	0	-	0	0	.
chr16	88644479	88644480	chr16:88644480:G:T	rs3794623	G	T	G	Sox2_MA0143.3	9	0	-	0	0	.
chr16	88665329	88665330	chr16:88665330:T:G	rs8064137	T	G	T	Sox2_MA0143.3	20	0	+	0	0	.
chr16	88681996	88681997	chr16:88681997:C:G	rs375544747	C	G	C	Sox2_MA0143.3	0	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr16	88703725	88703726	chr16:88703726:C:T	rs1021465437	C	T	C	Sox2_MA0143.3	16	0	-	0	0	.
chr16	88706987	88706988	chr16:88706988:G:A	rs2340973	G	A	A	Sox2_MA0143.3	26	0	+	0	0	.
chr16	88723578	88723579	chr16:88723579:G:C	rs75836451	G	C	G	Sox2_MA0143.3	16	0	-	0	0	.
chr16	88744624	88744625	chr16:88744625:T:C	rs4782405	T	C	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr16	88756338	88756339	chr16:88756339:T:C	rs11076713	T	C	C	Sox2_MA0143.3	23	0	-	0	0	.
chr16	88756373	88756374	chr16:88756374:A:G	rs9932392	A	G	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr16	88768796	88768797	chr16:88768797:C:T	rs561911363	C	T	G	Sox2_MA0143.3	14	0	-	0	0	.
chr16	88768820	88768821	chr16:88768821:C:T	rs149194020	C	T	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr16	88768828	88768829	chr16:88768829:C:T	rs183376953	C	T	c	Sox2_MA0143.3	-18	0	-	0	0	.
chr16	88792721	88792722	chr16:88792722:C:G	rs74035825	C	G	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr16	88800611	88800612	chr16:88800612:G:A	chr16:88800612:G:A	G	A	G	Sox2_MA0143.3	16	0	-	0	0	.
chr16	88813827	88813828	chr16:88813828:T:C	rs1135364	T	C	C	Sox2_MA0143.3	26	0	-	0	0	.
chr16	88996324	88996325	chr16:88996325:C:T	rs10852633	C	T	C	Sox2_MA0143.3	18	0	-	0	0	.
chr16	89080560	89080561	chr16:89080561:T:C	rs9936336	T	C	t	Sox2_MA0143.3	-2	0	+	0	0	.
chr16	89114730	89114731	chr16:89114731:T:G	rs3743982	T	G	G	Sox2_MA0143.3	19	0	-	0	0	.
chr16	89134403	89134404	chr16:89134404:G:A	rs11076768	G	A	A	Sox2_MA0143.3	-16	0	-	0	0	.
chr16	89144380	89144381	chr16:89144381:G:A	rs571844620	G	A	G	Sox2_MA0143.3	26	0	+	0	0	.
chr16	89198072	89198073	chr16:89198073:C:T	rs117296012	C	T	C	Sox2_MA0143.3	16	0	-	0	0	.
chr16	89271117	89271118	chr16:89271118:G:A	rs56276510	G	A	g	Sox2_MA0143.3	-10	0	+	0	0	.
chr16	89328401	89328402	chr16:89328402:C:T	rs3114895	C	T	T	Sox2_MA0143.3	27	0	-	0	0	.
chr16	89565556	89565557	chr16:89565557:G:C	rs115956055	G	C	C	Sox2_MA0143.3	25	0	+	0	0	.
chr16	89581423	89581424	chr16:89581424:C:T	rs181817626	C	T	C	Sox2_MA0143.3	27	0	+	0	0	.
chr16	89624049	89624050	chr16:89624050:C:T	rs114757283	C	T	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr16	89806818	89806819	chr16:89806819:T:C	rs9940552	T	C	c	Sox2_MA0143.3	-8	0	+	0	0	.
chr16	89903153	89903154	chr16:89903154:G:A	rs8059306	G	A	G	Sox2_MA0143.3	24	0	+	0	0	.
chr16	89923043	89923044	chr16:89923044:G:A	rs7186815	G	A	G	Sox2_MA0143.3	-11	0	+	0	0	.
chr16	89926204	89926205	chr16:89926205:G:T	rs111398992	G	T	g	Sox2_MA0143.3	-7	0	+	0	0	.
chr16	89929381	89929382	chr16:89929382:A:G	rs12325120	A	G	-	Sox2_MA0143.3	25	0	+	0	0	.
chr16	90040116	90040117	chr16:90040117:T:C	rs4785767	T	C	T	Sox2_MA0143.3	13	0	-	0	0	.
chr16	90081954	90081955	chr16:90081955:A:G	rs75811316	A	G	.	Sox2_MA0143.3	20	0	+	0	0	.
chr16	90083513	90083514	chr16:90083514:A:G	rs12446019	A	G	.	Sox2_MA0143.3	-7	0	+	0	0	.
chr16	90093347	90093348	chr16:90093348:G:T	rs4785618	G	T	.	Sox2_MA0143.3	-5	0	-	0	0	.
chr17	195575	195576	chr17:195576:T:C	rs1108857	T	C	.	Sox2_MA0143.3	-2	0	+	0	0	.
chr17	224097	224098	chr17:224098:T:A	rs35147390	T	A	T	Sox2_MA0143.3	6	1	+	9.019595766176417	2.110840986861197	CCATTGTC
chr17	253179	253180	chr17:253180:C:T	rs7217222	C	T	C	Sox2_MA0143.3	9	0	-	0	0	.
chr17	261238	261239	chr17:261239:C:T	rs8073479	C	T	C	Sox2_MA0143.3	24	0	-	0	0	.
chr17	267126	267127	chr17:267127:G:A	rs540907687	G	A	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr17	311644	311645	chr17:311645:A:G	rs9905262	A	G	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr17	313748	313749	chr17:313749:G:C	rs73284676	G	C	G	Sox2_MA0143.3	16	0	-	0	0	.
chr17	402836	402837	chr17:402837:A:G	rs28380314	A	G	A	Sox2_MA0143.3	-20	0	-	0	0	.
chr17	410456	410457	chr17:410457:C:T	rs374291590	C	T	C	Sox2_MA0143.3	24	0	-	0	0	.
chr17	572539	572540	chr17:572540:T:C	rs12938729	T	C	-	Sox2_MA0143.3	27	0	-	0	0	.
chr17	598569	598570	chr17:598570:G:A	rs189492311	G	A	-	Sox2_MA0143.3	-6	0	+	0	0	.
chr17	611439	611440	chr17:611440:C:A	rs9916848	C	A	a	Sox2_MA0143.3	-6	0	-	0	0	.
chr17	653882	653883	chr17:653883:G:A	rs2543775	G	A	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr17	691419	691420	chr17:691420:G:A	rs114734178	G	A	G	Sox2_MA0143.3	20	0	-	0	0	.
chr17	694999	695000	chr17:695000:T:C	rs410157	T	C	C	Sox2_MA0143.3	10	0	+	0	0	.
chr17	716641	716642	chr17:716642:C:T	rs1227030	C	T	C	Sox2_MA0143.3	14	0	+	0	0	.
chr17	719256	719257	chr17:719257:C:A	rs461521	C	A	A	Sox2_MA0143.3	8	0	+	0	0	.
chr17	754489	754490	chr17:754490:G:A	rs3087833	G	A	G	Sox2_MA0143.3	1	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr17	756416	756417	chr17:756417:A:G	rs67509541	A	G	A	Sox2_MA0143.3	-18	0	-	0	0	.
chr17	794966	794967	chr17:794967:C:T	rs35581316	C	T	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr17	806556	806557	chr17:806557:C:T	rs12950366	C	T	T	Sox2_MA0143.3	14	0	+	0	0	.
chr17	846574	846575	chr17:846575:T:A	rs8071387	T	A	T	Sox2_MA0143.3	-13	0	-	0	0	.
chr17	846814	846815	chr17:846815:T:C	rs8071817	T	C	T	Sox2_MA0143.3	16	0	-	0	0	.
chr17	879658	879659	chr17:879659:G:T	rs7222487	G	T	T	Sox2_MA0143.3	25	0	-	0	0	.
chr17	916057	916058	chr17:916058:C:A	chr17:916058:C:A	C	A	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr17	918282	918283	chr17:918283:A:G	rs76401817	A	G	A	Sox2_MA0143.3	-10	0	+	0	0	.
chr17	998079	998080	chr17:998080:C:T	rs333655	C	T	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr17	1025935	1025936	chr17:1025936:C:T	rs2586257	C	T	C	Sox2_MA0143.3	5	1	-	9.019595766176417	2.110840986861197	CCATTGTC
chr17	1034341	1034342	chr17:1034342:A:G	rs72814004	A	G	A	Sox2_MA0143.3	20	0	-	0	0	.
chr17	1039613	1039614	chr17:1039614:G:C	rs527940616	G	C	G	Sox2_MA0143.3	13	0	-	0	0	.
chr17	1046692	1046693	chr17:1046693:G:A	rs2260053	G	A	G	Sox2_MA0143.3	18	0	-	0	0	.
chr17	1046699	1046700	chr17:1046700:C:T	rs62069675	C	T	T	Sox2_MA0143.3	11	0	-	0	0	.
chr17	1050215	1050216	chr17:1050216:C:T	rs2257540	C	T	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr17	1055871	1055872	chr17:1055872:T:C	rs192983529	T	C	T	Sox2_MA0143.3	11	0	-	0	0	.
chr17	1121189	1121190	chr17:1121190:A:C	rs7207980	A	C	C	Sox2_MA0143.3	11	0	-	0	0	.
chr17	1126769	1126770	chr17:1126770:C:G	rs560304579	C	G	C	Sox2_MA0143.3	1	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr17	1167766	1167767	chr17:1167767:T:G	rs9891415	T	G	t	Sox2_MA0143.3	4	1	+	9.800647049772198	2.8918922704569785	CCTTTGTT
chr17	1179788	1179789	chr17:1179789:A:G	rs62070499	A	G	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr17	1256976	1256977	chr17:1256977:C:A	rs4790319	C	A	C	Sox2_MA0143.3	-5	0	-	0	0	.
chr17	1330340	1330341	chr17:1330341:T:C	rs902966	T	C	T	Sox2_MA0143.3	-10	0	+	0	0	.
chr17	1333661	1333662	chr17:1333662:T:A	rs16945230	T	A	T	Sox2_MA0143.3	13	0	+	0	0	.
chr17	1385508	1385509	chr17:1385509:T:C	rs76601672	T	C	T	Sox2_MA0143.3	3	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr17	1398774	1398775	chr17:1398775:A:G	rs183688658	A	G	A	Sox2_MA0143.3	20	0	-	0	0	.
chr17	1399177	1399178	chr17:1399178:G:A	rs12452627	G	A	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr17	1399504	1399505	chr17:1399505:C:T	rs4790360	C	T	T	Sox2_MA0143.3	-3	0	+	0	0	.
chr17	1399516	1399517	chr17:1399517:G:A	rs1197315794	G	A	G	Sox2_MA0143.3	9	0	+	0	0	.
chr17	1405925	1405926	chr17:1405926:G:A	rs75693322	G	A	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr17	1460032	1460033	chr17:1460033:A:G	rs7504032	A	G	A	Sox2_MA0143.3	11	0	+	0	0	.
chr17	1481984	1481985	chr17:1481985:T:C	rs11078461	T	C	C	Sox2_MA0143.3	13	0	+	0	0	.
chr17	1493564	1493565	chr17:1493565:C:T	rs575849794	C	T	C	Sox2_MA0143.3	16	0	-	0	0	.
chr17	1520271	1520272	chr17:1520272:A:G	rs15362	A	G	G	Sox2_MA0143.3	14	0	-	0	0	.
chr17	1575165	1575166	chr17:1575166:G:A	rs2280457	G	A	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr17	1575202	1575203	chr17:1575203:C:T	rs1057123	C	T	T	Sox2_MA0143.3	20	0	+	0	0	.
chr17	1576446	1576447	chr17:1576447:A:G	rs6502794	A	G	G	Sox2_MA0143.3	17	0	-	0	0	.
chr17	1752519	1752520	chr17:1752520:C:G	rs560901429	C	G	C	Sox2_MA0143.3	25	0	+	0	0	.
chr17	1779717	1779718	chr17:1779718:G:A	rs11062	G	A	A	Sox2_MA0143.3	27	0	-	0	0	.
chr17	1779748	1779749	chr17:1779749:C:T	rs12951668	C	T	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr17	1792678	1792679	chr17:1792679:C:T	rs6502965	C	T	C	Sox2_MA0143.3	18	0	-	0	0	.
chr17	1865282	1865283	chr17:1865283:G:A	rs11078676	G	A	g	Sox2_MA0143.3	11	0	+	0	0	.
chr17	1873572	1873573	chr17:1873573:C:A	rs9901624	C	A	N	Sox2_MA0143.3	-5	0	+	0	0	.
chr17	1995505	1995506	chr17:1995506:C:A	rs12938667	C	A	C	Sox2_MA0143.3	0	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr17	2029021	2029022	chr17:2029022:A:C	rs7207864	A	C	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr17	2029034	2029035	chr17:2029035:T:C	rs56049826	T	C	T	Sox2_MA0143.3	3	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr17	2075189	2075190	chr17:2075190:T:C	rs9901671	T	C	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr17	2079692	2079693	chr17:2079693:G:T	rs116458948	G	T	G	Sox2_MA0143.3	26	0	-	0	0	.
chr17	2123672	2123673	chr17:2123673:A:G	rs77216542	A	G	A	Sox2_MA0143.3	23	0	-	0	0	.
chr17	2182303	2182304	chr17:2182304:G:A	rs7214741	G	A	A	Sox2_MA0143.3	-7	0	+	0	0	.
chr17	2236359	2236360	chr17:2236360:C:G	rs2273984	C	G	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr17	2319030	2319031	chr17:2319031:C:T	rs8081273	C	T	T	Sox2_MA0143.3	14	0	+	0	0	.
chr17	2385012	2385013	chr17:2385013:G:T	rs889905245	G	T	G	Sox2_MA0143.3	12	0	-	0	0	.
chr17	2408691	2408692	chr17:2408692:C:T	rs8069356	C	T	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr17	2419481	2419482	chr17:2419482:T:C	rs1056321	T	C	T	Sox2_MA0143.3	4	1	+	8.864090315184848	1.9553355358696274	CCTTTGTG
chr17	2675353	2675354	chr17:2675354:G:T	rs4790353	G	T	T	Sox2_MA0143.3	14	0	-	0	0	.
chr17	2874713	2874714	chr17:2874714:A:G	rs72819268	A	G	A	Sox2_MA0143.3	-16	0	-	0	0	.
chr17	2931460	2931461	chr17:2931461:G:A	rs28729707	G	A	G	Sox2_MA0143.3	-12	0	+	0	0	.
chr17	2940703	2940704	chr17:2940704:A:G	rs2317467	A	G	G	Sox2_MA0143.3	-2	0	+	0	0	.
chr17	2959849	2959850	chr17:2959850:T:G	rs8070330	T	G	G	Sox2_MA0143.3	13	0	+	0	0	.
chr17	2959857	2959858	chr17:2959858:T:G	rs9901627	T	G	G	Sox2_MA0143.3	21	0	+	0	0	.
chr17	2978427	2978428	chr17:2978428:C:T	rs62091999	C	T	C	Sox2_MA0143.3	20	0	-	0	0	.
chr17	2978432	2978433	chr17:2978433:G:A	rs6502657	G	A	A	Sox2_MA0143.3	15	0	-	0	0	.
chr17	3003783	3003784	chr17:3003784:G:C	rs559316902	G	C	g	Sox2_MA0143.3	16	0	-	0	0	.
chr17	3003788	3003789	chr17:3003789:G:A	rs747452953	G	A	G	Sox2_MA0143.3	11	0	-	0	0	.
chr17	3289398	3289399	chr17:3289399:T:G	rs1894302	T	G	T	Sox2_MA0143.3	-4	0	+	0	0	.
chr17	3492831	3492832	chr17:3492832:G:A	rs2035938	G	A	G	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr17	3496400	3496401	chr17:3496401:C:T	rs11868193	C	T	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr17	3668586	3668587	chr17:3668587:T:C	rs115412026	T	C	C	Sox2_MA0143.3	24	0	-	0	0	.
chr17	3872069	3872070	chr17:3872070:G:A	rs72825471	G	A	G	Sox2_MA0143.3	23	0	-	0	0	.
chr17	3872090	3872091	chr17:3872091:T:C	rs11078470	T	C	T	Sox2_MA0143.3	2	1	-	8.676919043985553	2.5582713367092715	CCATTGTG
chr17	3911423	3911424	chr17:3911424:C:T	rs12946584	C	T	C	Sox2_MA0143.3	18	0	-	0	0	.
chr17	3911431	3911432	chr17:3911432:G:C	rs73971717	G	C	G	Sox2_MA0143.3	10	0	-	0	0	.
chr17	4001761	4001762	chr17:4001762:A:G	rs79348521	A	G	A	Sox2_MA0143.3	26	0	-	0	0	.
chr17	4023476	4023477	chr17:4023477:T:C	rs3765	T	C	t	Sox2_MA0143.3	14	0	-	0	0	.
chr17	4054690	4054691	chr17:4054691:C:G	rs781849	C	G	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr17	4186900	4186901	chr17:4186901:G:A	rs34188453	G	A	G	Sox2_MA0143.3	25	0	-	0	0	.
chr17	4186906	4186907	chr17:4186907:A:G	rs78871641	A	G	A	Sox2_MA0143.3	19	0	-	0	0	.
chr17	4251130	4251131	chr17:4251131:T:G	rs11078490	T	G	g	Sox2_MA0143.3	22	0	-	0	0	.
chr17	4328788	4328789	chr17:4328789:C:A	rs4790613	C	A	A	Sox2_MA0143.3	13	0	-	0	0	.
chr17	4433466	4433467	chr17:4433467:T:C	rs9896511	T	C	C	Sox2_MA0143.3	9	0	+	0	0	.
chr17	4446886	4446887	chr17:4446887:T:C	rs2047233	T	C	C	Sox2_MA0143.3	3	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr17	4479568	4479569	chr17:4479569:G:C	rs333131	G	C	G	Sox2_MA0143.3	8	0	+	0	0	.
chr17	4482207	4482208	chr17:4482208:C:T	rs12952341	C	T	C	Sox2_MA0143.3	13	0	-	0	0	.
chr17	4521669	4521670	chr17:4521670:G:A	rs9916478	G	A	A	Sox2_MA0143.3	25	0	+	0	0	.
chr17	4534271	4534272	chr17:4534272:A:T	rs78555253	A	T	A	Sox2_MA0143.3	15	0	-	0	0	.
chr17	4534328	4534329	chr17:4534329:G:T	rs369407413	G	T	g	Sox2_MA0143.3	-13	0	-	0	0	.
chr17	4534333	4534334	chr17:4534334:G:A	rs149722380	G	A	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr17	4603258	4603259	chr17:4603259:G:T	rs8076149	G	T	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr17	4643263	4643264	chr17:4643264:A:G	rs9894225	A	G	A	Sox2_MA0143.3	-8	0	-	0	0	.
chr17	4648997	4648998	chr17:4648998:T:G	rs568607230	T	G	T	Sox2_MA0143.3	16	0	+	0	0	.
chr17	4682949	4682950	chr17:4682950:G:C	rs370267840	G	C	G	Sox2_MA0143.3	22	0	+	0	0	.
chr17	4708803	4708804	chr17:4708804:A:G	rs145467113	A	G	A	Sox2_MA0143.3	27	0	-	0	0	.
chr17	4710256	4710257	chr17:4710257:C:T	rs540921543	C	T	C	Sox2_MA0143.3	23	0	-	0	0	.
chr17	4730749	4730750	chr17:4730750:T:C	rs75046533	T	C	T	Sox2_MA0143.3	3	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr17	4893360	4893361	chr17:4893361:T:C	rs2302320	T	C	T	Sox2_MA0143.3	-11	0	+	0	0	.
chr17	4939288	4939289	chr17:4939289:G:T	rs537470013	G	T	G	Sox2_MA0143.3	10	0	-	0	0	.
chr17	4947824	4947825	chr17:4947825:C:T	chr17:4947825:C:T	C	T	C	Sox2_MA0143.3	24	0	-	0	0	.
chr17	4952926	4952927	chr17:4952927:C:T	rs372561412	C	T	T	Sox2_MA0143.3	26	0	-	0	0	.
chr17	5111297	5111298	chr17:5111298:G:A	rs116603413	G	A	G	Sox2_MA0143.3	11	0	+	0	0	.
chr17	5127535	5127536	chr17:5127536:C:T	rs114149414	C	T	C	Sox2_MA0143.3	14	0	-	0	0	.
chr17	5128730	5128731	chr17:5128731:A:G	rs2071457	A	G	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr17	5239870	5239871	chr17:5239871:C:T	rs10438724	C	T	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr17	5308105	5308106	chr17:5308106:A:G	rs115993580	A	G	A	Sox2_MA0143.3	6	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr17	5469486	5469487	chr17:5469487:C:G	rs9907058	C	G	G	Sox2_MA0143.3	-3	0	+	0	0	.
chr17	5509040	5509041	chr17:5509041:C:T	rs8079034	C	T	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr17	5536927	5536928	chr17:5536928:T:C	rs11657249	T	C	C	Sox2_MA0143.3	27	0	-	0	0	.
chr17	5587735	5587736	chr17:5587736:C:G	rs183028584	C	G	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr17	5673952	5673953	chr17:5673953:G:A	rs78798320	G	A	G	Sox2_MA0143.3	9	0	-	0	0	.
chr17	5705745	5705746	chr17:5705746:G:A	rs112551263	G	A	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr17	5770236	5770237	chr17:5770237:C:T	chr17:5770237:C:T	C	T	C	Sox2_MA0143.3	27	0	+	0	0	.
chr17	5789606	5789607	chr17:5789607:C:T	rs141239498	C	T	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr17	5789630	5789631	chr17:5789631:A:C	rs8081807	A	C	C	Sox2_MA0143.3	13	0	+	0	0	.
chr17	5866612	5866613	chr17:5866613:C:T	rs17766220	C	T	C	Sox2_MA0143.3	11	0	+	0	0	.
chr17	5871733	5871734	chr17:5871734:T:C	rs34096040	T	C	C	Sox2_MA0143.3	20	0	-	0	0	.
chr17	5906052	5906053	chr17:5906053:G:C	rs74702959	G	C	G	Sox2_MA0143.3	1	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr17	5939474	5939475	chr17:5939475:T:C	rs17825455	T	C	T	Sox2_MA0143.3	6	1	+	9.019595766176417	2.110840986861197	CCATTGTC
chr17	6003297	6003298	chr17:6003298:T:C	rs12937377	T	C	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr17	6003308	6003309	chr17:6003309:A:G	rs12947424	A	G	G	Sox2_MA0143.3	-2	0	+	0	0	.
chr17	6057816	6057817	chr17:6057817:A:G	rs7213594	A	G	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr17	6091633	6091634	chr17:6091634:T:C	rs73974665	T	C	T	Sox2_MA0143.3	22	0	+	0	0	.
chr17	6097271	6097272	chr17:6097272:G:A	rs7213280	G	A	G	Sox2_MA0143.3	24	0	+	0	0	.
chr17	6143180	6143181	chr17:6143181:T:G	rs79566685	T	G	T	Sox2_MA0143.3	3	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr17	6155054	6155055	chr17:6155055:G:A	rs77112221	G	A	G	Sox2_MA0143.3	9	0	-	0	0	.
chr17	6160076	6160077	chr17:6160077:C:T	rs78793456	C	T	C	Sox2_MA0143.3	1	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr17	6186804	6186805	chr17:6186805:A:G	rs9891509	A	G	g	Sox2_MA0143.3	16	0	-	0	0	.
chr17	6254069	6254070	chr17:6254070:G:T	rs4796313	G	T	G	Sox2_MA0143.3	22	0	+	0	0	.
chr17	6382047	6382048	chr17:6382048:T:C	rs9893316	T	C	t	Sox2_MA0143.3	-15	0	+	0	0	.
chr17	6383826	6383827	chr17:6383827:A:G	rs8070923	A	G	A	Sox2_MA0143.3	15	0	+	0	0	.
chr17	6407995	6407996	chr17:6407996:C:A	rs4796484	C	A	c	Sox2_MA0143.3	-19	0	-	0	0	.
chr17	6454696	6454697	chr17:6454697:G:A	rs4796331	G	A	G	Sox2_MA0143.3	23	0	-	0	0	.
chr17	6454706	6454707	chr17:6454707:G:A	rs1470145101	G	A	G	Sox2_MA0143.3	13	0	-	0	0	.
chr17	6494452	6494453	chr17:6494453:A:G	rs4541125	A	G	A	Sox2_MA0143.3	3	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr17	6499131	6499132	chr17:6499132:A:G	rs34677202	A	G	a	Sox2_MA0143.3	18	0	-	0	0	.
chr17	6499487	6499488	chr17:6499488:G:T	rs114957688	G	T	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr17	6517230	6517231	chr17:6517231:C:T	rs7218891	C	T	T	Sox2_MA0143.3	5	1	-	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr17	6536206	6536207	chr17:6536207:T:C	rs1808939	T	C	t	Sox2_MA0143.3	2	1	-	9.019595766176417	2.900948058900136	CCATTGTC
chr17	6552455	6552456	chr17:6552456:A:C	chr17:6552456:A:C	A	C	A	Sox2_MA0143.3	-8	0	-	0	0	.
chr17	6553748	6553749	chr17:6553749:G:A	rs1867273	G	A	G	Sox2_MA0143.3	26	0	+	0	0	.
chr17	6559754	6559755	chr17:6559755:A:G	rs930514	A	G	G	Sox2_MA0143.3	22	0	-	0	0	.
chr17	6571483	6571484	chr17:6571484:C:G	rs8064565	C	G	G	Sox2_MA0143.3	11	0	+	0	0	.
chr17	6641144	6641145	chr17:6641145:G:A	rs34720503	G	A	G	Sox2_MA0143.3	8	0	-	0	0	.
chr17	6671301	6671302	chr17:6671302:C:T	rs12937298	C	T	c	Sox2_MA0143.3	-10	0	+	0	0	.
chr17	6790146	6790147	chr17:6790147:G:A	rs1509122	G	A	A	Sox2_MA0143.3	-8	0	-	0	0	.
chr17	6842516	6842517	chr17:6842517:A:G	rs11657303	A	G	G	Sox2_MA0143.3	2	1	-	9.800647049772198	3.494828071296623	CCTTTGTT
chr17	6842524	6842525	chr17:6842525:T:C	rs11658237	T	C	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr17	6936551	6936552	chr17:6936552:C:T	rs188002707	C	T	C	Sox2_MA0143.3	11	0	+	0	0	.
chr17	7015242	7015243	chr17:7015243:G:A	rs770304863	G	A	G	Sox2_MA0143.3	-12	0	+	0	0	.
chr17	7117187	7117188	chr17:7117188:T:C	rs12951306	T	C	C	Sox2_MA0143.3	18	0	-	0	0	.
chr17	7229236	7229237	chr17:7229237:C:T	rs222837	C	T	T	Sox2_MA0143.3	13	0	-	0	0	.
chr17	7258833	7258834	chr17:7258834:C:T	chr17:7258834:C:T	C	T	C	Sox2_MA0143.3	23	0	+	0	0	.
chr17	7330237	7330238	chr17:7330238:G:A	rs138476467	G	A	G	Sox2_MA0143.3	10	0	-	0	0	.
chr17	7330255	7330256	chr17:7330256:C:A	rs555562314	C	A	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr17	7346550	7346551	chr17:7346551:G:T	rs11657406	G	T	G	Sox2_MA0143.3	18	0	-	0	0	.
chr17	7404216	7404217	chr17:7404217:A:C	chr17:7404217:A:C	A	C	A	Sox2_MA0143.3	-5	0	+	0	0	.
chr17	7492229	7492230	chr17:7492230:A:G	rs7217258	A	G	A	Sox2_MA0143.3	-12	0	+	0	0	.
chr17	7587468	7587469	chr17:7587469:C:G	rs147742866	C	G	C	Sox2_MA0143.3	15	0	+	0	0	.
chr17	7587479	7587480	chr17:7587480:G:A	rs16956808	G	A	G	Sox2_MA0143.3	26	0	+	0	0	.
chr17	7641661	7641662	chr17:7641662:T:G	rs1642806	T	G	T	Sox2_MA0143.3	21	0	+	0	0	.
chr17	7646824	7646825	chr17:7646825:T:C	rs1641521	T	C	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr17	7657516	7657517	chr17:7657517:T:G	rs1050541	T	G	T	Sox2_MA0143.3	25	0	+	0	0	.
chr17	7705014	7705015	chr17:7705015:A:G	rs143425452	A	G	A	Sox2_MA0143.3	-8	0	-	0	0	.
chr17	7712328	7712329	chr17:7712329:G:A	rs115535656	G	A	G	Sox2_MA0143.3	1	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr17	7717073	7717074	chr17:7717074:T:A	rs780126732	T	A	T	Sox2_MA0143.3	12	0	+	0	0	.
chr17	7766551	7766552	chr17:7766552:G:T	rs17733320	G	T	G	Sox2_MA0143.3	10	0	-	0	0	.
chr17	7802091	7802092	chr17:7802092:G:T	rs8073332	G	T	G	Sox2_MA0143.3	25	0	-	0	0	.
chr17	7931233	7931234	chr17:7931234:T:G	rs117866415	T	G	T	Sox2_MA0143.3	-17	0	+	0	0	.
chr17	8028972	8028973	chr17:8028973:C:T	rs60893558	C	T	C	Sox2_MA0143.3	22	0	+	0	0	.
chr17	8036449	8036450	chr17:8036450:G:A	rs8072331	G	A	A	Sox2_MA0143.3	-2	0	+	0	0	.
chr17	8056443	8056444	chr17:8056444:G:A	rs189070065	G	A	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr17	8071282	8071283	chr17:8071283:G:A	rs4534913	G	A	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr17	8117818	8117819	chr17:8117819:G:T	rs115656439	G	T	G	Sox2_MA0143.3	-12	0	+	0	0	.
chr17	8176553	8176554	chr17:8176554:T:G	chr17:8176554:T:G	T	G	.	Sox2_MA0143.3	-19	0	+	0	0	.
chr17	8176571	8176572	chr17:8176572:C:A	rs530658792	C	A	.	Sox2_MA0143.3	-1	0	+	0	0	.
chr17	8249554	8249555	chr17:8249555:C:G	rs545659066	C	G	C	Sox2_MA0143.3	0	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr17	8362457	8362458	chr17:8362458:A:G	rs4792792	A	G	A	Sox2_MA0143.3	10	0	-	0	0	.
chr17	8395674	8395675	chr17:8395675:A:G	rs6503113	A	G	A	Sox2_MA0143.3	25	0	-	0	0	.
chr17	8470810	8470811	chr17:8470811:C:T	rs141063953	C	T	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr17	8476498	8476499	chr17:8476499:T:G	rs2132101	T	G	G	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr17	8514802	8514803	chr17:8514803:G:A	rs141943432	G	A	G	Sox2_MA0143.3	27	0	-	0	0	.
chr17	8571476	8571477	chr17:8571477:C:T	rs72845200	C	T	C	Sox2_MA0143.3	0	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr17	8746310	8746311	chr17:8746311:G:T	rs7208890	G	T	T	Sox2_MA0143.3	0	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr17	8746319	8746320	chr17:8746320:A:C	rs78296832	A	C	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr17	8784532	8784533	chr17:8784533:G:A	rs1553072	G	A	G	Sox2_MA0143.3	-2	0	+	0	0	.
chr17	8792172	8792173	chr17:8792173:C:T	rs111499354	C	T	T	Sox2_MA0143.3	-12	0	-	0	0	.
chr17	8837981	8837982	chr17:8837982:G:C	rs193109348	G	C	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr17	8861601	8861602	chr17:8861602:A:G	rs11652783	A	G	A	Sox2_MA0143.3	20	0	+	0	0	.
chr17	8875653	8875654	chr17:8875654:G:A	rs17808142	G	A	G	Sox2_MA0143.3	7	1	-	9.206767037375712	9.800647049772198	CCTTTGTC
chr17	8914167	8914168	chr17:8914168:T:C	rs61758027	T	C	T	Sox2_MA0143.3	22	0	+	0	0	.
chr17	9003522	9003523	chr17:9003523:C:T	rs563285124	C	T	c	Sox2_MA0143.3	9	0	+	0	0	.
chr17	9072027	9072028	chr17:9072028:G:T	rs955393	G	T	G	Sox2_MA0143.3	24	0	+	0	0	.
chr17	9106966	9106967	chr17:9106967:T:C	rs9893230	T	C	C	Sox2_MA0143.3	23	0	+	0	0	.
chr17	9195261	9195262	chr17:9195262:G:A	rs3888089	G	A	g	Sox2_MA0143.3	-13	0	+	0	0	.
chr17	9203288	9203289	chr17:9203289:T:C	rs16958034	T	C	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr17	9289792	9289793	chr17:9289793:C:A	rs78967846	C	A	C	Sox2_MA0143.3	19	0	-	0	0	.
chr17	9371295	9371296	chr17:9371296:C:T	rs946961844	C	T	C	Sox2_MA0143.3	24	0	+	0	0	.
chr17	9388984	9388985	chr17:9388985:G:A	rs16958233	G	A	G	Sox2_MA0143.3	5	1	+	9.613475778572903	2.7047209992576837	CCATTGTT
chr17	9509641	9509642	chr17:9509642:G:T	rs62066197	G	T	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr17	9519740	9519741	chr17:9519741:C:T	rs139982755	C	T	C	Sox2_MA0143.3	13	0	-	0	0	.
chr17	9519811	9519812	chr17:9519812:C:T	rs543615556	C	T	C	Sox2_MA0143.3	0	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr17	9591543	9591544	chr17:9591544:C:T	rs34162768	C	T	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr17	9612459	9612460	chr17:9612460:G:A	rs6503235	G	A	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr17	9685132	9685133	chr17:9685133:T:G	rs8066941	T	G	T	Sox2_MA0143.3	2	1	-	9.613475778572903	3.494828071296623	CCATTGTT
chr17	9685137	9685138	chr17:9685138:G:A	rs8079769	G	A	G	Sox2_MA0143.3	-3	0	-	0	0	.
chr17	9789699	9789700	chr17:9789700:T:C	rs11657355	T	C	T	Sox2_MA0143.3	20	0	-	0	0	.
chr17	9789730	9789731	chr17:9789731:G:A	rs11078818	G	A	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr17	9837922	9837923	chr17:9837923:T:C	rs1402656	T	C	C	Sox2_MA0143.3	4	1	+	8.676919043985553	1.7681642646703322	CCATTGTG
chr17	9837924	9837925	chr17:9837925:T:A	rs73974304	T	A	T	Sox2_MA0143.3	6	1	+	8.676919043985553	1.7681642646703326	CCATTGTG
chr17	9841921	9841922	chr17:9841922:C:G	rs9905842	C	G	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr17	9876451	9876452	chr17:9876452:G:A	rs9911768	G	A	G	Sox2_MA0143.3	19	0	-	0	0	.
chr17	9878691	9878692	chr17:9878692:G:A	rs76194458	G	A	G	Sox2_MA0143.3	27	0	-	0	0	.
chr17	9878710	9878711	chr17:9878711:G:A	rs62066054	G	A	G	Sox2_MA0143.3	8	0	-	0	0	.
chr17	9965453	9965454	chr17:9965454:A:C	rs4534887	A	C	C	Sox2_MA0143.3	10	0	-	0	0	.
chr17	9965463	9965464	chr17:9965464:G:A	rs4479284	G	A	A	Sox2_MA0143.3	0	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr17	10047576	10047577	chr17:10047577:A:G	chr17:10047577:A:G	A	G	A	Sox2_MA0143.3	-4	0	-	0	0	.
chr17	10065527	10065528	chr17:10065528:T:C	rs9912213	T	C	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr17	10086491	10086492	chr17:10086492:G:C	rs73974416	G	C	G	Sox2_MA0143.3	18	0	+	0	0	.
chr17	10100569	10100570	chr17:10100570:T:G	rs118012628	T	G	T	Sox2_MA0143.3	23	0	+	0	0	.
chr17	10116640	10116641	chr17:10116641:C:T	rs73273878	C	T	c	Sox2_MA0143.3	5	1	-	9.019595766176417	2.110840986861197	CCATTGTC
chr17	10121980	10121981	chr17:10121981:G:A	rs3764429	G	A	G	Sox2_MA0143.3	20	0	-	0	0	.
chr17	10151898	10151899	chr17:10151899:C:T	rs79666361	C	T	C	Sox2_MA0143.3	1	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr17	10199208	10199209	chr17:10199209:C:G	rs148165696	C	G	C	Sox2_MA0143.3	-20	0	-	0	0	.
chr17	10205819	10205820	chr17:10205820:A:G	rs55933076	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr17	10205834	10205835	chr17:10205835:C:A	rs114672750	C	A	C	Sox2_MA0143.3	-12	0	-	0	0	.
chr17	10318638	10318639	chr17:10318639:A:G	rs2074870	A	G	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr17	10457089	10457090	chr17:10457090:C:T	rs60195042	C	T	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr17	10641098	10641099	chr17:10641099:G:T	rs876657	G	T	T	Sox2_MA0143.3	15	0	+	0	0	.
chr17	10646234	10646235	chr17:10646235:C:A	rs2239932	C	A	C	Sox2_MA0143.3	5	1	-	8.676919043985553	1.7681642646703324	CCATTGTG
chr17	10673478	10673479	chr17:10673479:C:T	rs192135714	C	T	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr17	10748343	10748344	chr17:10748344:G:A	rs78327043	G	A	G	Sox2_MA0143.3	17	0	+	0	0	.
chr17	10755447	10755448	chr17:10755448:G:A	rs7211233	G	A	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr17	10779425	10779426	chr17:10779426:A:C	rs9913343	A	C	C	Sox2_MA0143.3	16	0	+	0	0	.
chr17	10789275	10789276	chr17:10789276:A:G	rs9894468	A	G	A	Sox2_MA0143.3	8	0	-	0	0	.
chr17	10845741	10845742	chr17:10845742:A:G	rs35379100	A	G	A	Sox2_MA0143.3	9	0	-	0	0	.
chr17	11019637	11019638	chr17:11019638:C:T	rs75520202	C	T	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr17	11024280	11024281	chr17:11024281:A:G	rs8078061	A	G	A	Sox2_MA0143.3	-9	0	-	0	0	.
chr17	11473944	11473945	chr17:11473945:C:T	rs2321891	C	T	T	Sox2_MA0143.3	-7	0	+	0	0	.
chr17	11489178	11489179	chr17:11489179:G:A	rs2969214	G	A	G	Sox2_MA0143.3	10	0	+	0	0	.
chr17	11511921	11511922	chr17:11511922:C:T	rs17701052	C	T	C	Sox2_MA0143.3	21	0	-	0	0	.
chr17	11596522	11596523	chr17:11596523:A:C	rs3809729	A	C	A	Sox2_MA0143.3	21	0	+	0	0	.
chr17	11899300	11899301	chr17:11899301:T:C	rs73298453	T	C	T	Sox2_MA0143.3	-3	0	+	0	0	.
chr17	11944604	11944605	chr17:11944605:A:G	rs4792201	A	G	A	Sox2_MA0143.3	9	0	+	0	0	.
chr17	12056501	12056502	chr17:12056502:C:T	rs12939944	C	T	C	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr17	12181011	12181012	chr17:12181012:G:A	rs7210691	G	A	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr17	12463955	12463956	chr17:12463956:A:G	rs4643365	A	G	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr17	12520072	12520073	chr17:12520073:G:A	rs73289380	G	A	G	Sox2_MA0143.3	1	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr17	12523406	12523407	chr17:12523407:T:C	rs237349	T	C	T	Sox2_MA0143.3	9	0	-	0	0	.
chr17	12523435	12523436	chr17:12523436:T:C	rs237348	T	C	C	Sox2_MA0143.3	-20	0	-	0	0	.
chr17	12616553	12616554	chr17:12616554:T:C	rs2176664	T	C	T	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr17	12671546	12671547	chr17:12671547:C:T	rs16946408	C	T	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr17	12679375	12679376	chr17:12679376:T:G	rs11657108	T	G	T	Sox2_MA0143.3	16	0	-	0	0	.
chr17	12874393	12874394	chr17:12874394:A:T	rs57561236	A	T	A	Sox2_MA0143.3	27	0	-	0	0	.
chr17	12898177	12898178	chr17:12898178:A:G	rs11652958	A	G	A	Sox2_MA0143.3	24	0	+	0	0	.
chr17	12902101	12902102	chr17:12902102:G:A	rs73294298	G	A	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr17	12911336	12911337	chr17:12911337:C:T	rs4791519	C	T	T	Sox2_MA0143.3	25	0	-	0	0	.
chr17	12960071	12960072	chr17:12960072:C:T	rs10445248	C	T	T	Sox2_MA0143.3	19	0	-	0	0	.
chr17	12976675	12976676	chr17:12976676:T:A	rs3785713	T	A	A	Sox2_MA0143.3	-10	0	-	0	0	.
chr17	13185032	13185033	chr17:13185033:G:A	rs9909519	G	A	G	Sox2_MA0143.3	1	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr17	13240905	13240906	chr17:13240906:T:C	rs528983749	T	C	T	Sox2_MA0143.3	16	0	-	0	0	.
chr17	13287929	13287930	chr17:13287930:C:A	rs2079019	C	A	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr17	13346947	13346948	chr17:13346948:A:T	rs2521898	A	T	T	Sox2_MA0143.3	22	0	+	0	0	.
chr17	13372605	13372606	chr17:13372606:C:T	rs774141258	C	T	C	Sox2_MA0143.3	12	0	+	0	0	.
chr17	13399343	13399344	chr17:13399344:C:T	rs73978803	C	T	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr17	13421289	13421290	chr17:13421290:T:G	rs7213966	T	G	T	Sox2_MA0143.3	-14	0	+	0	0	.
chr17	13472084	13472085	chr17:13472085:G:A	rs758201	G	A	G	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr17	13473975	13473976	chr17:13473976:G:A	rs11078160	G	A	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr17	13561882	13561883	chr17:13561883:C:A	rs115719006	C	A	C	Sox2_MA0143.3	5	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr17	13636086	13636087	chr17:13636087:A:G	rs117890083	A	G	A	Sox2_MA0143.3	-4	0	-	0	0	.
chr17	13667993	13667994	chr17:13667994:C:T	rs78368252	C	T	T	Sox2_MA0143.3	-2	0	-	0	0	.
chr17	13728258	13728259	chr17:13728259:T:C	rs9915497	T	C	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr17	13844534	13844535	chr17:13844535:A:G	rs6502305	A	G	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr17	13924116	13924117	chr17:13924117:G:T	rs60317181	G	T	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr17	13932718	13932719	chr17:13932719:A:G	rs11078211	A	G	G	Sox2_MA0143.3	-5	0	+	0	0	.
chr17	13947777	13947778	chr17:13947778:G:A	rs61318810	G	A	G	Sox2_MA0143.3	27	0	-	0	0	.
chr17	14014818	14014819	chr17:14014819:C:T	rs35209188	C	T	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr17	14197250	14197251	chr17:14197251:C:T	rs79287727	C	T	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr17	14206365	14206366	chr17:14206366:A:G	rs3785662	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr17	14231304	14231305	chr17:14231305:A:T	rs2529624	A	T	A	Sox2_MA0143.3	4	1	-	9.206767037375712	2.2980122580604916	CCTTTGTC
chr17	14286204	14286205	chr17:14286205:C:A	rs7216720	C	A	C	Sox2_MA0143.3	18	0	-	0	0	.
chr17	14330834	14330835	chr17:14330835:C:T	chr17:14330835:C:T	C	T	C	Sox2_MA0143.3	22	0	+	0	0	.
chr17	14339652	14339653	chr17:14339653:A:T	rs75869928	A	T	A	Sox2_MA0143.3	-18	0	-	0	0	.
chr17	14340122	14340123	chr17:14340123:G:T	rs9894280	G	T	T	Sox2_MA0143.3	10	0	-	0	0	.
chr17	14340125	14340126	chr17:14340126:C:G	rs9893855	C	G	G	Sox2_MA0143.3	7	1	-	8.864090315184848	9.206767037375712	CCTTTGTG
chr17	14389377	14389378	chr17:14389378:T:C	rs3912261	T	C	T	Sox2_MA0143.3	21	0	+	0	0	.
chr17	14506439	14506440	chr17:14506440:T:G	rs597805	T	G	T	Sox2_MA0143.3	8	0	+	0	0	.
chr17	14593719	14593720	chr17:14593720:C:T	rs73271031	C	T	C	Sox2_MA0143.3	24	0	-	0	0	.
chr17	14594045	14594046	chr17:14594046:C:T	rs7226120	C	T	T	Sox2_MA0143.3	-14	0	-	0	0	.
chr17	14827885	14827886	chr17:14827886:G:A	rs7215329	G	A	G	Sox2_MA0143.3	11	0	+	0	0	.
chr17	14926597	14926598	chr17:14926598:C:T	rs16950619	C	T	C	Sox2_MA0143.3	24	0	-	0	0	.
chr17	14938025	14938026	chr17:14938026:A:C	rs146662911	A	C	A	Sox2_MA0143.3	12	0	-	0	0	.
chr17	15077441	15077442	chr17:15077442:G:A	rs9907293	G	A	G	Sox2_MA0143.3	21	0	+	0	0	.
chr17	15090683	15090684	chr17:15090684:T:C	rs11078278	T	C	C	Sox2_MA0143.3	23	0	-	0	0	.
chr17	15091936	15091937	chr17:15091937:G:A	rs143781257	G	A	G	Sox2_MA0143.3	1	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr17	15108910	15108911	chr17:15108911:T:C	rs35758181	T	C	T	Sox2_MA0143.3	11	0	-	0	0	.
chr17	15156228	15156229	chr17:15156229:G:T	rs147690627	G	T	G	Sox2_MA0143.3	10	0	-	0	0	.
chr17	15180328	15180329	chr17:15180329:G:A	rs75485152	G	A	A	Sox2_MA0143.3	11	0	+	0	0	.
chr17	15244905	15244906	chr17:15244906:A:G	rs230916	A	G	A	Sox2_MA0143.3	22	0	-	0	0	.
chr17	15244938	15244939	chr17:15244939:T:C	rs230915	T	C	T	Sox2_MA0143.3	-11	0	-	0	0	.
chr17	15265808	15265809	chr17:15265809:C:A	chr17:15265809:C:A	C	A	C	Sox2_MA0143.3	12	0	+	0	0	.
chr17	15332548	15332549	chr17:15332549:C:T	rs12452683	C	T	c	Sox2_MA0143.3	19	0	-	0	0	.
chr17	15332560	15332561	chr17:15332561:G:A	rs1380184	G	A	A	Sox2_MA0143.3	7	1	-	9.019595766176417	9.613475778572903	CCATTGTC
chr17	15389846	15389847	chr17:15389847:G:T	rs917518	G	T	T	Sox2_MA0143.3	-16	0	+	0	0	.
chr17	15392773	15392774	chr17:15392774:G:T	rs12449941	G	T	G	Sox2_MA0143.3	8	0	+	0	0	.
chr17	15418746	15418747	chr17:15418747:G:A	rs8078304	G	A	G	Sox2_MA0143.3	16	0	-	0	0	.
chr17	15441714	15441715	chr17:15441715:G:A	rs12941020	G	A	G	Sox2_MA0143.3	-3	0	-	0	0	.
chr17	15470602	15470603	chr17:15470603:C:T	rs4791622	C	T	C	Sox2_MA0143.3	17	0	-	0	0	.
chr17	15480355	15480356	chr17:15480356:A:G	rs7219850	A	G	G	Sox2_MA0143.3	21	0	+	0	0	.
chr17	15700484	15700485	chr17:15700485:A:G	rs144866168	A	G	a	Sox2_MA0143.3	14	0	+	0	0	.
chr17	15897099	15897100	chr17:15897100:C:G	rs859234	C	G	N	Sox2_MA0143.3	5	1	-	9.613475778572903	2.7047209992576837	CCATTGTT
chr17	15921173	15921174	chr17:15921174:T:G	rs181065704	T	G	T	Sox2_MA0143.3	-10	0	-	0	0	.
chr17	15972706	15972707	chr17:15972707:C:A	rs78804732	C	A	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr17	16000287	16000288	chr17:16000288:C:A	rs758853	C	A	C	Sox2_MA0143.3	1	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr17	16273735	16273736	chr17:16273736:C:G	rs7219038	C	G	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr17	16321560	16321561	chr17:16321561:A:C	rs12948905	A	C	a	Sox2_MA0143.3	-6	0	+	0	0	.
chr17	16325917	16325918	chr17:16325918:A:G	rs15739	A	G	A	Sox2_MA0143.3	15	0	-	0	0	.
chr17	16416634	16416635	chr17:16416635:C:T	rs79269225	C	T	c	Sox2_MA0143.3	-8	0	-	0	0	.
chr17	16430912	16430913	chr17:16430913:C:T	rs12938124	C	T	.	Sox2_MA0143.3	21	0	+	0	0	.
chr17	16569000	16569001	chr17:16569001:A:G	rs145057251	A	G	A	Sox2_MA0143.3	11	0	-	0	0	.
chr17	16653158	16653159	chr17:16653159:A:G	rs7221518	A	G	.	Sox2_MA0143.3	-6	0	+	0	0	.
chr17	16870433	16870434	chr17:16870434:A:G	rs899795	A	G	a	Sox2_MA0143.3	-5	0	+	0	0	.
chr17	16907644	16907645	chr17:16907645:A:G	rs11658549	A	G	A	Sox2_MA0143.3	23	0	-	0	0	.
chr17	16921140	16921141	chr17:16921141:C:G	rs73980222	C	G	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr17	16932738	16932739	chr17:16932739:C:T	rs3751988	C	T	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr17	16934903	16934904	chr17:16934904:C:T	rs3829584	C	T	C	Sox2_MA0143.3	12	0	-	0	0	.
chr17	17005051	17005052	chr17:17005052:T:C	rs28624345	T	C	N	Sox2_MA0143.3	-17	0	-	0	0	.
chr17	17042319	17042320	chr17:17042320:G:T	rs1342496080	G	T	g	Sox2_MA0143.3	-4	0	+	0	0	.
chr17	17114646	17114647	chr17:17114647:G:A	rs4985733	G	A	G	Sox2_MA0143.3	18	0	+	0	0	.
chr17	17154467	17154468	chr17:17154468:C:A	rs3744132	C	A	C	Sox2_MA0143.3	26	0	+	0	0	.
chr17	17188948	17188949	chr17:17188949:C:T	rs34976658	C	T	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr17	17244310	17244311	chr17:17244311:C:T	rs1708628	C	T	T	Sox2_MA0143.3	-14	0	-	0	0	.
chr17	17313772	17313773	chr17:17313773:C:G	rs12948357	C	G	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr17	17313773	17313774	chr17:17313774:A:G	rs9898993	A	G	G	Sox2_MA0143.3	-3	0	+	0	0	.
chr17	17315610	17315611	chr17:17315611:G:A	rs7217503	G	A	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr17	17319766	17319767	chr17:17319767:A:G	rs9904396	A	G	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr17	17344301	17344302	chr17:17344302:A:G	rs17726924	A	G	A	Sox2_MA0143.3	2	1	+	9.613475778572903	3.494828071296623	CCATTGTT
chr17	17416751	17416752	chr17:17416752:G:A	rs16961663	G	A	G	Sox2_MA0143.3	1	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr17	17440401	17440402	chr17:17440402:G:A	rs77899281	G	A	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr17	17506738	17506739	chr17:17506739:A:G	rs4646409	A	G	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr17	17572252	17572253	chr17:17572253:T:C	rs729974	T	C	C	Sox2_MA0143.3	6	1	+	9.206767037375712	2.298012258060492	CCTTTGTC
chr17	17609980	17609981	chr17:17609981:T:C	rs12937187	T	C	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr17	17660704	17660705	chr17:17660705:G:C	rs4924807	G	C	G	Sox2_MA0143.3	17	0	-	0	0	.
chr17	17670354	17670355	chr17:17670355:T:C	rs9907322	T	C	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr17	17685982	17685983	chr17:17685983:G:A	chr17:17685983:G:A	G	A	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr17	17750877	17750878	chr17:17750878:G:T	rs73981049	G	T	G	Sox2_MA0143.3	20	0	+	0	0	.
chr17	17754163	17754164	chr17:17754164:C:T	rs11651383	C	T	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr17	17771652	17771653	chr17:17771653:T:C	rs55767800	T	C	T	Sox2_MA0143.3	3	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr17	17790263	17790264	chr17:17790264:A:C	rs112331986	A	C	A	Sox2_MA0143.3	-18	0	+	0	0	.
chr17	17836643	17836644	chr17:17836644:G:A	rs3785497	G	A	G	Sox2_MA0143.3	10	0	-	0	0	.
chr17	17837191	17837192	chr17:17837192:A:G	rs545484767	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr17	17851611	17851612	chr17:17851612:G:A	rs77431985	G	A	G	Sox2_MA0143.3	19	0	-	0	0	.
chr17	17858891	17858892	chr17:17858892:A:G	rs117718998	A	G	A	Sox2_MA0143.3	26	0	+	0	0	.
chr17	17869114	17869115	chr17:17869115:C:A	rs74912104	C	A	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr17	17921259	17921260	chr17:17921260:A:C	rs78692119	A	C	A	Sox2_MA0143.3	7	1	-	9.800647049772198	8.864090315184848	CCTTTGTT
chr17	17937508	17937509	chr17:17937509:G:T	rs11078406	G	T	G	Sox2_MA0143.3	9	0	-	0	0	.
chr17	17937974	17937975	chr17:17937975:G:A	rs8078368	G	A	G	Sox2_MA0143.3	24	0	-	0	0	.
chr17	18043615	18043616	chr17:18043616:C:G	rs61746093	C	G	C	Sox2_MA0143.3	10	0	+	0	0	.
chr17	18064082	18064083	chr17:18064083:G:A	rs2955371	G	A	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr17	18123251	18123252	chr17:18123252:C:T	rs854789	C	T	T	Sox2_MA0143.3	-5	0	-	0	0	.
chr17	18164089	18164090	chr17:18164090:A:G	rs854804	A	G	G	Sox2_MA0143.3	15	0	+	0	0	.
chr17	18224757	18224758	chr17:18224758:A:G	rs950550489	A	G	A	Sox2_MA0143.3	9	0	+	0	0	.
chr17	18225451	18225452	chr17:18225452:G:A	rs554671511	G	A	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr17	18259947	18259948	chr17:18259948:C:T	rs28364628	C	T	C	Sox2_MA0143.3	26	0	-	0	0	.
chr17	18259962	18259963	chr17:18259963:C:T	rs548405687	C	T	C	Sox2_MA0143.3	11	0	-	0	0	.
chr17	18362167	18362168	chr17:18362168:A:G	rs921204842	A	G	a	Sox2_MA0143.3	24	0	-	0	0	.
chr17	18464063	18464064	chr17:18464064:G:C	rs4924758	G	C	g	Sox2_MA0143.3	-11	0	+	0	0	.
chr17	18695254	18695255	chr17:18695255:C:T	rs8070109	C	T	.	Sox2_MA0143.3	0	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr17	18756240	18756241	chr17:18756241:T:C	rs147772607	T	C	T	Sox2_MA0143.3	12	0	+	0	0	.
chr17	18867831	18867832	chr17:18867832:G:A	rs9912713	G	A	A	Sox2_MA0143.3	-14	0	+	0	0	.
chr17	18867854	18867855	chr17:18867855:G:A	rs11653729	G	A	G	Sox2_MA0143.3	9	0	+	0	0	.
chr17	18981275	18981276	chr17:18981276:C:T	rs142760836	C	T	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr17	19239875	19239876	chr17:19239876:T:C	chr17:19239876:T:C	T	C	t	Sox2_MA0143.3	3	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr17	19306634	19306635	chr17:19306635:C:T	rs868126848	C	T	C	Sox2_MA0143.3	12	0	-	0	0	.
chr17	19310432	19310433	chr17:19310433:A:G	rs7214247	A	G	A	Sox2_MA0143.3	6	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr17	19384105	19384106	chr17:19384106:G:C	rs1054206	G	C	G	Sox2_MA0143.3	10	0	-	0	0	.
chr17	19397917	19397918	chr17:19397918:A:G	rs1912013	A	G	G	Sox2_MA0143.3	22	0	+	0	0	.
chr17	19434871	19434872	chr17:19434872:G:T	rs2386316	G	T	T	Sox2_MA0143.3	15	0	-	0	0	.
chr17	19476259	19476260	chr17:19476260:G:T	rs568998229	G	T	g	Sox2_MA0143.3	-20	0	-	0	0	.
chr17	19560029	19560030	chr17:19560030:G:A	rs2289669	G	A	G	Sox2_MA0143.3	20	0	-	0	0	.
chr17	19619741	19619742	chr17:19619742:C:T	rs968012	C	T	C	Sox2_MA0143.3	20	0	+	0	0	.
chr17	19727788	19727789	chr17:19727789:C:T	rs567541327	C	T	C	Sox2_MA0143.3	19	0	+	0	0	.
chr17	19734226	19734227	chr17:19734227:C:A	rs12948881	C	A	C	Sox2_MA0143.3	-5	0	-	0	0	.
chr17	19734237	19734238	chr17:19734238:G:A	rs11650088	G	A	g	Sox2_MA0143.3	-16	0	-	0	0	.
chr17	19753040	19753041	chr17:19753041:G:A	rs930995895	G	A	G	Sox2_MA0143.3	14	0	-	0	0	.
chr17	20087676	20087677	chr17:20087677:T:C	rs7208635	T	C	C	Sox2_MA0143.3	24	0	-	0	0	.
chr17	20098002	20098003	chr17:20098003:T:C	rs9944451	T	C	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr17	20103986	20103987	chr17:20103987:G:A	rs138407299	G	A	G	Sox2_MA0143.3	21	0	+	0	0	.
chr17	20155196	20155197	chr17:20155197:C:T	rs10438824	C	T	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr17	20261937	20261938	chr17:20261938:C:T	rs2526466	C	T	.	Sox2_MA0143.3	-20	0	+	0	0	.
chr17	20535319	20535320	chr17:20535320:T:C	rs7210869	T	C	t	Sox2_MA0143.3	19	0	+	0	0	.
chr17	20553558	20553559	chr17:20553559:C:A	rs73309127	C	A	.	Sox2_MA0143.3	-3	0	+	0	0	.
chr17	20572459	20572460	chr17:20572460:C:A	rs71371196	C	A	.	Sox2_MA0143.3	25	0	-	0	0	.
chr17	20993172	20993173	chr17:20993173:G:A	rs1485538125	G	A	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr17	21007555	21007556	chr17:21007556:A:T	rs8079468	A	T	A	Sox2_MA0143.3	12	0	+	0	0	.
chr17	21010970	21010971	chr17:21010971:G:C	rs10512422	G	C	G	Sox2_MA0143.3	22	0	-	0	0	.
chr17	21011321	21011322	chr17:21011322:G:A	rs2291035	G	A	G	Sox2_MA0143.3	11	0	-	0	0	.
chr17	21025640	21025641	chr17:21025641:A:C	rs1115509	A	C	C	Sox2_MA0143.3	7	1	-	9.613475778572903	8.676919043985553	CCATTGTT
chr17	21027706	21027707	chr17:21027707:G:A	rs11652224	G	A	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr17	21034623	21034624	chr17:21034624:T:C	rs115864171	T	C	T	Sox2_MA0143.3	26	0	+	0	0	.
chr17	21126632	21126633	chr17:21126633:T:G	rs59311375	T	G	T	Sox2_MA0143.3	-20	0	+	0	0	.
chr17	21172880	21172881	chr17:21172881:C:G	rs16962250	C	G	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr17	21219008	21219009	chr17:21219009:A:G	rs731870	A	G	A	Sox2_MA0143.3	26	0	+	0	0	.
chr17	21307641	21307642	chr17:21307642:T:C	rs9911949	T	C	c	Sox2_MA0143.3	4	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr17	21337261	21337262	chr17:21337262:C:T	rs578082125	C	T	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr17	21365270	21365271	chr17:21365271:C:T	rs8078135	C	T	T	Sox2_MA0143.3	-1	0	-	0	0	.
chr17	21371066	21371067	chr17:21371067:C:A	rs78776846	C	A	A	Sox2_MA0143.3	5	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr17	21381360	21381361	chr17:21381361:T:A	rs4488509	T	A	A	Sox2_MA0143.3	20	0	+	0	0	.
chr17	21402190	21402191	chr17:21402191:C:T	rs55845097	C	T	c	Sox2_MA0143.3	0	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr17	21402214	21402215	chr17:21402215:G:C	rs4021065	G	C	N	Sox2_MA0143.3	24	0	+	0	0	.
chr17	21428886	21428887	chr17:21428887:T:C	rs202084591	T	C	T	Sox2_MA0143.3	13	0	+	0	0	.
chr17	21449916	21449917	chr17:21449917:G:T	rs73980030	G	T	G	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr17	21449935	21449936	chr17:21449936:A:G	rs77565626	A	G	A	Sox2_MA0143.3	-19	0	-	0	0	.
chr17	21522011	21522012	chr17:21522012:A:G	rs12453531	A	G	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr17	21574573	21574574	chr17:21574574:T:C	rs186809521	T	C	t	Sox2_MA0143.3	2	1	-	9.613475778572903	3.494828071296623	CCATTGTT
chr17	21676152	21676153	chr17:21676153:G:A	rs1296373651	G	A	.	Sox2_MA0143.3	-14	0	+	0	0	.
chr17	21676157	21676158	chr17:21676158:C:T	rs1372456865	C	T	.	Sox2_MA0143.3	-9	0	+	0	0	.
chr17	21678666	21678667	chr17:21678667:G:C	rs1392755898	G	C	.	Sox2_MA0143.3	-3	0	+	0	0	.
chr17	21689606	21689607	chr17:21689607:C:T	rs1291248091	C	T	.	Sox2_MA0143.3	19	0	+	0	0	.
chr17	21702020	21702021	chr17:21702021:T:C	rs1213927531	T	C	.	Sox2_MA0143.3	-15	0	+	0	0	.
chr17	22132118	22132119	chr17:22132119:A:C	rs80109279	A	C	.	Sox2_MA0143.3	-15	0	+	0	0	.
chr17	22140909	22140910	chr17:22140910:T:C	rs372812030	T	C	.	Sox2_MA0143.3	13	0	+	0	0	.
chr17	22140913	22140914	chr17:22140914:T:A	rs374766679	T	A	.	Sox2_MA0143.3	17	0	+	0	0	.
chr17	22236537	22236538	chr17:22236538:G:T	rs72479797	G	T	.	Sox2_MA0143.3	17	0	-	0	0	.
chr17	22689710	22689711	chr17:22689711:C:G	rs12325997	C	G	c	Sox2_MA0143.3	-6	0	-	0	0	.
chr17	27084016	27084017	chr17:27084017:G:A	rs144431010	G	A	g	Sox2_MA0143.3	-18	0	+	0	0	.
chr17	27155140	27155141	chr17:27155141:C:T	rs2313511	C	T	c	Sox2_MA0143.3	25	0	-	0	0	.
chr17	27206794	27206795	chr17:27206795:G:T	rs57979236	G	T	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr17	27293554	27293555	chr17:27293555:A:G	rs1875043	A	G	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr17	27544923	27544924	chr17:27544924:T:C	rs2948528	T	C	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr17	27604610	27604611	chr17:27604611:G:T	rs2289567	G	T	G	Sox2_MA0143.3	23	0	+	0	0	.
chr17	27655148	27655149	chr17:27655149:A:G	rs1354065715	A	G	A	Sox2_MA0143.3	16	0	-	0	0	.
chr17	27662349	27662350	chr17:27662350:C:T	rs112233246	C	T	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr17	27736214	27736215	chr17:27736215:C:A	rs9913455	C	A	C	Sox2_MA0143.3	25	0	-	0	0	.
chr17	27755700	27755701	chr17:27755701:G:A	rs28944232	G	A	G	Sox2_MA0143.3	8	0	+	0	0	.
chr17	27780228	27780229	chr17:27780229:T:C	rs28999375	T	C	T	Sox2_MA0143.3	-2	0	-	0	0	.
chr17	27817712	27817713	chr17:27817713:C:T	rs1014025	C	T	T	Sox2_MA0143.3	-3	0	+	0	0	.
chr17	27946580	27946581	chr17:27946581:G:A	rs740645	G	A	A	Sox2_MA0143.3	-13	0	-	0	0	.
chr17	27965665	27965666	chr17:27965666:C:T	rs75218558	C	T	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr17	27980211	27980212	chr17:27980212:C:A	rs1241893742	C	A	C	Sox2_MA0143.3	5	1	-	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr17	28274106	28274107	chr17:28274107:T:G	rs2006933	T	G	t	Sox2_MA0143.3	-3	0	-	0	0	.
chr17	28336233	28336234	chr17:28336234:C:T	rs75976962	C	T	C	Sox2_MA0143.3	1	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr17	28364298	28364299	chr17:28364299:A:G	rs9910163	A	G	G	Sox2_MA0143.3	-3	0	-	0	0	.
chr17	28488309	28488310	chr17:28488310:G:A	rs1990288	G	A	G	Sox2_MA0143.3	5	1	+	9.019595766176417	2.110840986861197	CCATTGTC
chr17	28745284	28745285	chr17:28745285:G:T	rs141742125	G	T	G	Sox2_MA0143.3	12	0	+	0	0	.
chr17	28763722	28763723	chr17:28763723:C:G	rs11650282	C	G	G	Sox2_MA0143.3	9	0	-	0	0	.
chr17	28912357	28912358	chr17:28912358:G:C	rs4795475	G	C	G	Sox2_MA0143.3	16	0	-	0	0	.
chr17	28950609	28950610	chr17:28950610:G:A	chr17:28950610:G:A	G	A	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr17	28968410	28968411	chr17:28968411:G:A	rs773848903	G	A	G	Sox2_MA0143.3	5	1	+	9.206767037375712	2.298012258060492	CCTTTGTC
chr17	28968412	28968413	chr17:28968413:C:T	rs116294447	C	T	C	Sox2_MA0143.3	7	1	+	9.206767037375712	9.800647049772198	CCTTTGTC
chr17	28992151	28992152	chr17:28992152:C:A	rs12452815	C	A	.	Sox2_MA0143.3	-20	0	+	0	0	.
chr17	29006455	29006456	chr17:29006456:A:G	rs149183914	A	G	A	Sox2_MA0143.3	21	0	-	0	0	.
chr17	29122947	29122948	chr17:29122948:G:A	rs73988918	G	A	G	Sox2_MA0143.3	17	0	-	0	0	.
chr17	29122957	29122958	chr17:29122958:T:C	rs882729	T	C	C	Sox2_MA0143.3	7	1	-	3.5547341015215945	8.864090315184848	CCTTTGTA
chr17	29158611	29158612	chr17:29158612:G:A	chr17:29158612:G:A	G	A	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr17	29379531	29379532	chr17:29379532:A:T	rs12449415	A	T	A	Sox2_MA0143.3	21	0	+	0	0	.
chr17	29446168	29446169	chr17:29446169:G:C	rs141395557	G	C	g	Sox2_MA0143.3	14	0	+	0	0	.
chr17	29494486	29494487	chr17:29494487:A:C	rs144661708	A	C	A	Sox2_MA0143.3	27	0	-	0	0	.
chr17	29567184	29567185	chr17:29567185:C:G	rs947334312	C	G	C	Sox2_MA0143.3	17	0	+	0	0	.
chr17	29584606	29584607	chr17:29584607:C:T	rs192362805	C	T	C	Sox2_MA0143.3	27	0	+	0	0	.
chr17	29683609	29683610	chr17:29683610:T:G	rs7501472	T	G	T	Sox2_MA0143.3	-16	0	-	0	0	.
chr17	29713384	29713385	chr17:29713385:C:T	rs3102562	C	T	T	Sox2_MA0143.3	19	0	-	0	0	.
chr17	29727129	29727130	chr17:29727130:C:T	rs137973678	C	T	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr17	29850173	29850174	chr17:29850174:C:T	rs79586058	C	T	C	Sox2_MA0143.3	5	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr17	30101683	30101684	chr17:30101684:G:A	rs370192497	G	A	g	Sox2_MA0143.3	24	0	-	0	0	.
chr17	30470038	30470039	chr17:30470039:A:T	rs8078761	A	T	T	Sox2_MA0143.3	26	0	+	0	0	.
chr17	30555258	30555259	chr17:30555259:T:C	rs113517811	T	C	t	Sox2_MA0143.3	14	0	+	0	0	.
chr17	30710111	30710112	chr17:30710112:G:A	rs112823937	G	A	.	Sox2_MA0143.3	-17	0	+	0	0	.
chr17	30822533	30822534	chr17:30822534:G:C	rs55638872	G	C	.	Sox2_MA0143.3	16	0	-	0	0	.
chr17	31136558	31136559	chr17:31136559:A:G	rs12939969	A	G	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr17	31215710	31215711	chr17:31215711:G:T	rs9914217	G	T	G	Sox2_MA0143.3	8	0	+	0	0	.
chr17	31274398	31274399	chr17:31274399:A:C	rs113359320	A	C	A	Sox2_MA0143.3	-10	0	-	0	0	.
chr17	31416532	31416533	chr17:31416533:C:T	rs11657064	C	T	C	Sox2_MA0143.3	12	0	+	0	0	.
chr17	31418962	31418963	chr17:31418963:G:A	rs7406402	G	A	a	Sox2_MA0143.3	25	0	+	0	0	.
chr17	31434749	31434750	chr17:31434750:C:T	rs34436312	C	T	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr17	31475615	31475616	chr17:31475616:G:A	rs370268423	G	A	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr17	31476880	31476881	chr17:31476881:G:A	rs11867423	G	A	G	Sox2_MA0143.3	14	0	-	0	0	.
chr17	31671982	31671983	chr17:31671983:A:G	rs7219254	A	G	A	Sox2_MA0143.3	12	0	-	0	0	.
chr17	31674815	31674816	chr17:31674816:T:C	rs9893718	T	C	T	Sox2_MA0143.3	-13	0	+	0	0	.
chr17	31675636	31675637	chr17:31675637:A:T	rs12943215	A	T	A	Sox2_MA0143.3	17	0	+	0	0	.
chr17	31675637	31675638	chr17:31675638:C:T	rs368308	C	T	T	Sox2_MA0143.3	18	0	+	0	0	.
chr17	31677737	31677738	chr17:31677738:C:T	rs34777874	C	T	C	Sox2_MA0143.3	0	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr17	31677748	31677749	chr17:31677749:C:A	rs35834526	C	A	C	Sox2_MA0143.3	11	0	+	0	0	.
chr17	31694301	31694302	chr17:31694302:G:A	rs315499	G	A	A	Sox2_MA0143.3	10	0	+	0	0	.
chr17	31696194	31696195	chr17:31696195:C:T	rs1003598885	C	T	C	Sox2_MA0143.3	27	0	-	0	0	.
chr17	31722308	31722309	chr17:31722309:C:A	rs35846884	C	A	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr17	31729740	31729741	chr17:31729741:A:G	rs9903277	A	G	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr17	31738469	31738470	chr17:31738470:G:A	rs9890482	G	A	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr17	31792147	31792148	chr17:31792148:G:A	rs28756859	G	A	G	Sox2_MA0143.3	-9	0	+	0	0	.
chr17	32106069	32106070	chr17:32106070:A:C	rs72825761	A	C	.	Sox2_MA0143.3	19	0	+	0	0	.
chr17	32119099	32119100	chr17:32119100:G:C	rs7224932	G	C	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr17	32119101	32119102	chr17:32119102:C:G	rs543217336	C	G	C	Sox2_MA0143.3	1	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr17	32141733	32141734	chr17:32141734:C:G	rs115067417	C	G	C	Sox2_MA0143.3	10	0	+	0	0	.
chr17	32227930	32227931	chr17:32227931:A:G	rs7225527	A	G	A	Sox2_MA0143.3	16	0	+	0	0	.
chr17	32382694	32382695	chr17:32382695:C:T	rs117628426	C	T	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr17	32461947	32461948	chr17:32461948:G:A	rs9913984	G	A	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr17	32486487	32486488	chr17:32486488:C:T	rs370068242	C	T	C	Sox2_MA0143.3	14	0	-	0	0	.
chr17	32516591	32516592	chr17:32516592:G:A	rs11651743	G	A	G	Sox2_MA0143.3	25	0	+	0	0	.
chr17	32519451	32519452	chr17:32519452:A:C	chr17:32519452:A:C	A	C	A	Sox2_MA0143.3	-9	0	-	0	0	.
chr17	32521004	32521005	chr17:32521005:T:C	rs62062462	T	C	T	Sox2_MA0143.3	7	1	+	9.800647049772198	9.206767037375712	CCTTTGTT
chr17	32733248	32733249	chr17:32733249:C:T	rs6505309	C	T	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr17	32904636	32904637	chr17:32904637:A:G	rs9910534	A	G	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr17	33073596	33073597	chr17:33073597:G:C	rs9893346	G	C	G	Sox2_MA0143.3	25	0	-	0	0	.
chr17	33227514	33227515	chr17:33227515:G:A	rs319748	G	A	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr17	33310526	33310527	chr17:33310527:G:A	rs79260661	G	A	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr17	33367059	33367060	chr17:33367060:G:A	rs16968253	G	A	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr17	33483304	33483305	chr17:33483305:A:G	rs12452051	A	G	G	Sox2_MA0143.3	16	0	-	0	0	.
chr17	33520831	33520832	chr17:33520832:G:A	rs76925476	G	A	G	Sox2_MA0143.3	13	0	-	0	0	.
chr17	33544234	33544235	chr17:33544235:G:T	rs9915789	G	T	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr17	33551900	33551901	chr17:33551901:A:C	rs4795805	A	C	C	Sox2_MA0143.3	26	0	-	0	0	.
chr17	33675025	33675026	chr17:33675026:A:G	rs3103662	A	G	G	Sox2_MA0143.3	-16	0	-	0	0	.
chr17	33676821	33676822	chr17:33676822:T:C	rs7222632	T	C	T	Sox2_MA0143.3	-13	0	+	0	0	.
chr17	33793554	33793555	chr17:33793555:G:A	rs59208184	G	A	G	Sox2_MA0143.3	19	0	+	0	0	.
chr17	33862756	33862757	chr17:33862757:G:T	rs55783993	G	T	g	Sox2_MA0143.3	0	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr17	33920565	33920566	chr17:33920566:C:G	rs4794977	C	G	G	Sox2_MA0143.3	17	0	-	0	0	.
chr17	33921949	33921950	chr17:33921950:T:A	rs17783755	T	A	A	Sox2_MA0143.3	8	0	-	0	0	.
chr17	33930212	33930213	chr17:33930213:C:T	rs12452988	C	T	T	Sox2_MA0143.3	-13	0	+	0	0	.
chr17	33937917	33937918	chr17:33937918:G:T	rs9906069	G	T	G	Sox2_MA0143.3	9	0	+	0	0	.
chr17	33973359	33973360	chr17:33973360:C:T	rs902560	C	T	T	Sox2_MA0143.3	-13	0	+	0	0	.
chr17	33979712	33979713	chr17:33979713:A:G	rs1360948	A	G	G	Sox2_MA0143.3	13	0	+	0	0	.
chr17	34011716	34011717	chr17:34011717:A:C	rs56406346	A	C	A	Sox2_MA0143.3	-13	0	-	0	0	.
chr17	34172887	34172888	chr17:34172888:T:G	rs4795882	T	G	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr17	34235921	34235922	chr17:34235922:C:T	rs11868941	C	T	C	Sox2_MA0143.3	15	0	+	0	0	.
chr17	34239003	34239004	chr17:34239004:C:T	rs951553072	C	T	C	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr17	34292072	34292073	chr17:34292073:C:T	rs66536365	C	T	C	Sox2_MA0143.3	15	0	-	0	0	.
chr17	34292090	34292091	chr17:34292091:T:C	rs4795905	T	C	T	Sox2_MA0143.3	-3	0	-	0	0	.
chr17	34292354	34292355	chr17:34292355:C:A	rs184983166	C	A	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr17	34313189	34313190	chr17:34313190:G:A	rs12602687	G	A	A	Sox2_MA0143.3	-19	0	-	0	0	.
chr17	34313334	34313335	chr17:34313335:G:A	rs12602722	G	A	A	Sox2_MA0143.3	15	0	+	0	0	.
chr17	34349929	34349930	chr17:34349930:C:T	rs140976744	C	T	C	Sox2_MA0143.3	11	0	-	0	0	.
chr17	34360208	34360209	chr17:34360209:T:G	rs3136681	T	G	T	Sox2_MA0143.3	18	0	-	0	0	.
chr17	34400797	34400798	chr17:34400798:G:A	chr17:34400798:G:A	G	A	G	Sox2_MA0143.3	23	0	-	0	0	.
chr17	34400833	34400834	chr17:34400834:T:C	rs212480	T	C	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr17	34445452	34445453	chr17:34445453:T:C	rs4795924	T	C	T	Sox2_MA0143.3	24	0	-	0	0	.
chr17	34646121	34646122	chr17:34646122:T:C	rs72817901	T	C	C	Sox2_MA0143.3	21	0	+	0	0	.
chr17	34686493	34686494	chr17:34686494:A:T	rs4795969	A	T	T	Sox2_MA0143.3	-5	0	-	0	0	.
chr17	34699969	34699970	chr17:34699970:G:A	rs4795982	G	A	A	Sox2_MA0143.3	8	0	+	0	0	.
chr17	34721041	34721042	chr17:34721042:T:C	rs4795989	T	C	T	Sox2_MA0143.3	-2	0	+	0	0	.
chr17	34734104	34734105	chr17:34734105:G:A	rs117236437	G	A	G	Sox2_MA0143.3	20	0	-	0	0	.
chr17	34754570	34754571	chr17:34754571:C:T	rs11655495	C	T	C	Sox2_MA0143.3	12	0	+	0	0	.
chr17	34754609	34754610	chr17:34754610:G:A	rs4796000	G	A	A	Sox2_MA0143.3	8	0	+	0	0	.
chr17	34863775	34863776	chr17:34863776:T:C	rs370697319	T	C	t	Sox2_MA0143.3	-16	0	-	0	0	.
chr17	35079825	35079826	chr17:35079826:C:G	rs78417760	C	G	C	Sox2_MA0143.3	17	0	-	0	0	.
chr17	35080620	35080621	chr17:35080621:T:C	rs118074685	T	C	T	Sox2_MA0143.3	-3	0	-	0	0	.
chr17	35095195	35095196	chr17:35095196:T:A	rs9908653	T	A	T	Sox2_MA0143.3	16	0	+	0	0	.
chr17	35100586	35100587	chr17:35100587:G:A	rs12947947	G	A	G	Sox2_MA0143.3	26	0	-	0	0	.
chr17	35116313	35116314	chr17:35116314:G:A	rs140062175	G	A	g	Sox2_MA0143.3	-7	0	-	0	0	.
chr17	35177696	35177697	chr17:35177697:T:C	rs77782351	T	C	T	Sox2_MA0143.3	21	0	-	0	0	.
chr17	35177719	35177720	chr17:35177720:A:G	rs986043767	A	G	A	Sox2_MA0143.3	-2	0	-	0	0	.
chr17	35232967	35232968	chr17:35232968:C:T	rs34701040	C	T	T	Sox2_MA0143.3	-9	0	+	0	0	.
chr17	35244526	35244527	chr17:35244527:G:A	rs11080327	G	A	A	Sox2_MA0143.3	20	0	+	0	0	.
chr17	35274820	35274821	chr17:35274821:C:G	rs749451265	C	G	c	Sox2_MA0143.3	1	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr17	35274825	35274826	chr17:35274826:T:C	rs772117	T	C	c	Sox2_MA0143.3	6	1	+	9.019595766176417	2.110840986861197	CCATTGTC
chr17	35313942	35313943	chr17:35313943:C:G	rs79707369	C	G	C	Sox2_MA0143.3	5	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr17	35404485	35404486	chr17:35404486:C:T	rs12944887	C	T	.	Sox2_MA0143.3	16	0	+	0	0	.
chr17	35433108	35433109	chr17:35433109:G:C	rs7220663	G	C	G	Sox2_MA0143.3	1	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr17	35453324	35453325	chr17:35453325:G:A	rs141222853	G	A	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr17	35586959	35586960	chr17:35586960:A:G	chr17:35586960:A:G	A	G	A	Sox2_MA0143.3	2	1	+	9.019595766176417	2.900948058900136	CCATTGTC
chr17	35586969	35586970	chr17:35586970:C:T	rs28384428	C	T	C	Sox2_MA0143.3	12	0	+	0	0	.
chr17	35596926	35596927	chr17:35596927:T:G	rs225298	T	G	G	Sox2_MA0143.3	-12	0	+	0	0	.
chr17	35715448	35715449	chr17:35715449:G:A	rs9904187	G	A	G	Sox2_MA0143.3	14	0	-	0	0	.
chr17	35764652	35764653	chr17:35764653:T:C	chr17:35764653:T:C	T	C	T	Sox2_MA0143.3	18	0	+	0	0	.
chr17	35898872	35898873	chr17:35898873:G:C	rs1165462503	G	C	G	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr17	35969408	35969409	chr17:35969409:G:A	rs192651861	G	A	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr17	35985544	35985545	chr17:35985545:G:A	rs72830000	G	A	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr17	36079547	36079548	chr17:36079548:A:G	rs11651881	A	G	G	Sox2_MA0143.3	25	0	+	0	0	.
chr17	36125444	36125445	chr17:36125445:G:T	rs8073447	G	T	T	Sox2_MA0143.3	-20	0	+	0	0	.
chr17	36131858	36131859	chr17:36131859:G:T	rs2158115	G	T	G	Sox2_MA0143.3	8	0	+	0	0	.
chr17	36147095	36147096	chr17:36147096:A:G	rs2106883	A	G	A	Sox2_MA0143.3	12	0	+	0	0	.
chr17	36650809	36650810	chr17:36650810:T:C	rs73280703	T	C	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr17	36663597	36663598	chr17:36663598:C:T	rs76606302	C	T	C	Sox2_MA0143.3	17	0	+	0	0	.
chr17	36703010	36703011	chr17:36703011:G:A	rs6607339	G	A	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr17	36750366	36750367	chr17:36750367:G:T	rs60207231	G	T	T	Sox2_MA0143.3	19	0	+	0	0	.
chr17	36777539	36777540	chr17:36777540:T:C	rs7359578	T	C	T	Sox2_MA0143.3	27	0	-	0	0	.
chr17	36888751	36888752	chr17:36888752:G:C	rs7223375	G	C	G	Sox2_MA0143.3	0	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr17	36936352	36936353	chr17:36936353:C:G	rs75798013	C	G	G	Sox2_MA0143.3	25	0	-	0	0	.
chr17	37086602	37086603	chr17:37086603:C:T	rs12451927	C	T	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr17	37278378	37278379	chr17:37278379:C:T	rs2255527	C	T	C	Sox2_MA0143.3	17	0	+	0	0	.
chr17	37358506	37358507	chr17:37358507:G:C	chr17:37358507:G:C	G	C	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr17	37491125	37491126	chr17:37491126:C:T	rs1163359543	C	T	C	Sox2_MA0143.3	13	0	-	0	0	.
chr17	37514725	37514726	chr17:37514726:C:T	rs72828293	C	T	C	Sox2_MA0143.3	25	0	+	0	0	.
chr17	37640265	37640266	chr17:37640266:A:G	rs73293897	A	G	A	Sox2_MA0143.3	24	0	-	0	0	.
chr17	37672421	37672422	chr17:37672422:C:A	rs3094521	C	A	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr17	37682070	37682071	chr17:37682071:G:A	rs6607285	G	A	G	Sox2_MA0143.3	-2	0	+	0	0	.
chr17	37714970	37714971	chr17:37714971:A:G	rs11649743	A	G	G	Sox2_MA0143.3	12	0	+	0	0	.
chr17	37742061	37742062	chr17:37742062:C:T	rs184810088	C	T	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr17	37742092	37742093	chr17:37742093:C:T	rs188722403	C	T	C	Sox2_MA0143.3	15	0	+	0	0	.
chr17	38295890	38295891	chr17:38295891:G:T	rs71384211	G	T	g	Sox2_MA0143.3	8	0	+	0	0	.
chr17	38409162	38409163	chr17:38409163:A:T	rs6503574	A	T	T	Sox2_MA0143.3	-16	0	-	0	0	.
chr17	38416143	38416144	chr17:38416144:T:A	rs78615691	T	A	T	Sox2_MA0143.3	-10	0	+	0	0	.
chr17	38474673	38474674	chr17:38474674:T:A	rs11649863	T	A	T	Sox2_MA0143.3	8	0	+	0	0	.
chr17	38512718	38512719	chr17:38512719:C:T	rs60811562	C	T	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr17	38601881	38601882	chr17:38601882:G:A	rs767066572	G	A	G	Sox2_MA0143.3	-16	0	-	0	0	.
chr17	38606013	38606014	chr17:38606014:G:T	rs1270595404	G	T	G	Sox2_MA0143.3	25	0	-	0	0	.
chr17	38606030	38606031	chr17:38606031:T:C	rs1033742373	T	C	G	Sox2_MA0143.3	8	0	-	0	0	.
chr17	38606057	38606058	chr17:38606058:G:A	rs1311789714	G	A	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr17	38628807	38628808	chr17:38628808:C:T	rs117967023	C	T	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr17	38657788	38657789	chr17:38657789:G:T	rs192145462	G	T	G	Sox2_MA0143.3	5	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr17	38835850	38835851	chr17:38835851:G:A	rs8068270	G	A	G	Sox2_MA0143.3	22	0	+	0	0	.
chr17	38864678	38864679	chr17:38864679:G:A	rs35799865	G	A	g	Sox2_MA0143.3	-5	0	+	0	0	.
chr17	38885589	38885590	chr17:38885590:C:T	rs894328393	C	T	C	Sox2_MA0143.3	13	0	-	0	0	.
chr17	38898826	38898827	chr17:38898827:G:A	rs146656928	G	A	G	Sox2_MA0143.3	27	0	-	0	0	.
chr17	38899362	38899363	chr17:38899363:A:G	rs150386076	A	G	G	Sox2_MA0143.3	2	1	+	9.613475778572903	3.494828071296623	CCATTGTT
chr17	39052117	39052118	chr17:39052118:A:C	rs4795336	A	C	A	Sox2_MA0143.3	-14	0	-	0	0	.
chr17	39197787	39197788	chr17:39197788:C:T	rs562587990	C	T	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr17	39201139	39201140	chr17:39201140:A:G	rs183732775	A	G	A	Sox2_MA0143.3	-3	0	-	0	0	.
chr17	39247725	39247726	chr17:39247726:C:T	rs3964723	C	T	T	Sox2_MA0143.3	-14	0	+	0	0	.
chr17	39461590	39461591	chr17:39461591:G:A	chr17:39461591:G:A	G	A	G	Sox2_MA0143.3	13	0	-	0	0	.
chr17	39461591	39461592	chr17:39461592:C:A	chr17:39461592:C:A	C	A	C	Sox2_MA0143.3	12	0	-	0	0	.
chr17	39552587	39552588	chr17:39552588:T:C	rs7503377	T	C	C	Sox2_MA0143.3	16	0	+	0	0	.
chr17	39579867	39579868	chr17:39579868:C:T	rs72827140	C	T	C	Sox2_MA0143.3	11	0	-	0	0	.
chr17	39670890	39670891	chr17:39670891:C:T	rs113202383	C	T	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr17	39758094	39758095	chr17:39758095:T:A	chr17:39758095:T:A	T	A	T	Sox2_MA0143.3	20	0	-	0	0	.
chr17	39763097	39763098	chr17:39763098:A:G	rs67919571	A	G	A	Sox2_MA0143.3	-19	0	-	0	0	.
chr17	39814649	39814650	chr17:39814650:C:T	rs12952146	C	T	C	Sox2_MA0143.3	10	0	-	0	0	.
chr17	39835377	39835378	chr17:39835378:T:C	rs28449671	T	C	C	Sox2_MA0143.3	27	0	-	0	0	.
chr17	39896953	39896954	chr17:39896954:C:G	rs12453507	C	G	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr17	39913817	39913818	chr17:39913818:C:T	rs7216558	C	T	C	Sox2_MA0143.3	13	0	+	0	0	.
chr17	39980779	39980780	chr17:39980780:A:G	rs3859189	A	G	A	Sox2_MA0143.3	17	0	+	0	0	.
chr17	40061045	40061046	chr17:40061046:A:G	rs72834798	A	G	A	Sox2_MA0143.3	19	0	+	0	0	.
chr17	40068244	40068245	chr17:40068245:G:T	rs8078399	G	T	G	Sox2_MA0143.3	0	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr17	40073177	40073178	chr17:40073178:T:C	rs9892030	T	C	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr17	40073210	40073211	chr17:40073211:G:A	rs115243007	G	A	G	Sox2_MA0143.3	20	0	+	0	0	.
chr17	40101349	40101350	chr17:40101350:A:C	rs564024615	A	C	A	Sox2_MA0143.3	17	0	+	0	0	.
chr17	40117307	40117308	chr17:40117308:A:G	rs57234044	A	G	a	Sox2_MA0143.3	3	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr17	40311737	40311738	chr17:40311738:G:A	rs575874152	G	A	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr17	40484739	40484740	chr17:40484740:A:G	rs2290206	A	G	A	Sox2_MA0143.3	15	0	+	0	0	.
chr17	40568194	40568195	chr17:40568195:C:G	rs62066596	C	G	C	Sox2_MA0143.3	19	0	-	0	0	.
chr17	40647799	40647800	chr17:40647800:C:T	rs577564995	C	T	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr17	40841347	40841348	chr17:40841348:T:C	rs2469837	T	C	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr17	40870454	40870455	chr17:40870455:C:T	rs80230813	C	T	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr17	40937231	40937232	chr17:40937232:T:C	rs12952672	T	C	T	Sox2_MA0143.3	-13	0	+	0	0	.
chr17	40937252	40937253	chr17:40937253:G:A	rs1042654196	G	A	G	Sox2_MA0143.3	8	0	+	0	0	.
chr17	40952693	40952694	chr17:40952694:C:T	rs193078887	C	T	C	Sox2_MA0143.3	7	1	+	9.019595766176417	9.613475778572903	CCATTGTC
chr17	40990722	40990723	chr17:40990723:C:T	rs12453930	C	T	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr17	41062053	41062054	chr17:41062054:T:C	rs76228597	T	C	T	Sox2_MA0143.3	-16	0	+	0	0	.
chr17	41062060	41062061	chr17:41062061:A:G	rs74421445	A	G	A	Sox2_MA0143.3	-9	0	+	0	0	.
chr17	41340674	41340675	chr17:41340675:C:A	rs17656288	C	A	C	Sox2_MA0143.3	5	1	-	9.019595766176417	2.110840986861197	CCATTGTC
chr17	41340679	41340680	chr17:41340680:G:A	rs7221284	G	A	G	Sox2_MA0143.3	0	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr17	41417460	41417461	chr17:41417461:A:G	rs16966801	A	G	G	Sox2_MA0143.3	3	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr17	41529200	41529201	chr17:41529201:C:G	rs4616333	C	G	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr17	41535536	41535537	chr17:41535537:G:A	rs963478	G	A	G	Sox2_MA0143.3	24	0	-	0	0	.
chr17	41548952	41548953	chr17:41548953:A:G	rs1004625185	A	G	A	Sox2_MA0143.3	11	0	+	0	0	.
chr17	41548962	41548963	chr17:41548963:T:A	rs143751152	T	A	T	Sox2_MA0143.3	21	0	+	0	0	.
chr17	41579830	41579831	chr17:41579831:A:C	rs1840549	A	C	A	Sox2_MA0143.3	10	0	+	0	0	.
chr17	41637021	41637022	chr17:41637022:A:G	rs115545999	A	G	A	Sox2_MA0143.3	25	0	-	0	0	.
chr17	41687885	41687886	chr17:41687886:G:C	rs1311899923	G	C	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr17	41691388	41691389	chr17:41691389:A:G	rs111552916	A	G	A	Sox2_MA0143.3	-16	0	-	0	0	.
chr17	41705368	41705369	chr17:41705369:A:T	rs7215317	A	T	T	Sox2_MA0143.3	21	0	+	0	0	.
chr17	41712000	41712001	chr17:41712001:A:G	rs11658099	A	G	A	Sox2_MA0143.3	-20	0	-	0	0	.
chr17	41746481	41746482	chr17:41746482:G:A	rs4408592	G	A	G	Sox2_MA0143.3	15	0	-	0	0	.
chr17	41916132	41916133	chr17:41916133:G:C	rs35729326	G	C	G	Sox2_MA0143.3	23	0	-	0	0	.
chr17	41966068	41966069	chr17:41966069:C:T	rs3924432	C	T	C	Sox2_MA0143.3	15	0	-	0	0	.
chr17	41967543	41967544	chr17:41967544:C:T	rs57119058	C	T	C	Sox2_MA0143.3	15	0	+	0	0	.
chr17	42116397	42116398	chr17:42116398:A:G	rs4796771	A	G	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr17	42156212	42156213	chr17:42156213:T:C	rs74577647	T	C	T	Sox2_MA0143.3	-5	0	+	0	0	.
chr17	42185328	42185329	chr17:42185329:A:G	rs9902709	A	G	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr17	42300661	42300662	chr17:42300662:C:T	rs1367620915	C	T	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr17	42320249	42320250	chr17:42320250:G:A	rs370059164	G	A	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr17	42329510	42329511	chr17:42329511:G:C	rs2293152	G	C	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr17	42390191	42390192	chr17:42390192:G:C	rs4796793	G	C	C	Sox2_MA0143.3	0	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr17	42538099	42538100	chr17:42538100:G:C	rs4792923	G	C	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr17	42656050	42656051	chr17:42656051:G:A	rs12943352	G	A	A	Sox2_MA0143.3	16	0	-	0	0	.
chr17	42763147	42763148	chr17:42763148:T:G	rs9914640	T	G	T	Sox2_MA0143.3	11	0	+	0	0	.
chr17	43135127	43135128	chr17:43135128:T:C	rs1554063	T	C	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr17	43140305	43140306	chr17:43140306:T:C	rs1135214	T	C	t	Sox2_MA0143.3	6	1	+	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr17	43309221	43309222	chr17:43309222:A:G	rs4792987	A	G	a	Sox2_MA0143.3	2	1	+	9.019595766176417	2.900948058900136	CCATTGTC
chr17	43316063	43316064	chr17:43316064:T:C	chr17:43316064:T:C	T	C	t	Sox2_MA0143.3	11	0	-	0	0	.
chr17	43316081	43316082	chr17:43316082:A:G	rs1386749	A	G	t	Sox2_MA0143.3	-7	0	-	0	0	.
chr17	43316083	43316084	chr17:43316084:T:C	rs113613557	T	C	t	Sox2_MA0143.3	-9	0	-	0	0	.
chr17	43330685	43330686	chr17:43330686:G:A	rs35788301	G	A	g	Sox2_MA0143.3	-16	0	+	0	0	.
chr17	43334881	43334882	chr17:43334882:A:C	rs4793227	A	C	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr17	43359226	43359227	chr17:43359227:A:T	rs4793237	A	T	T	Sox2_MA0143.3	-3	0	-	0	0	.
chr17	43469428	43469429	chr17:43469429:G:C	rs1415222800	G	C	G	Sox2_MA0143.3	10	0	+	0	0	.
chr17	43482233	43482234	chr17:43482234:T:G	chr17:43482234:T:G	T	G	T	Sox2_MA0143.3	-6	0	-	0	0	.
chr17	43525489	43525490	chr17:43525490:T:G	rs9907813	T	G	G	Sox2_MA0143.3	-3	0	+	0	0	.
chr17	43525496	43525497	chr17:43525497:T:C	rs9907819	T	C	C	Sox2_MA0143.3	4	1	+	3.5547341015215945	-3.3540206777936254	CCTTTGTA
chr17	43528808	43528809	chr17:43528809:G:T	rs112942514	G	T	G	Sox2_MA0143.3	21	0	+	0	0	.
chr17	43573797	43573798	chr17:43573798:G:A	rs9915660	G	A	A	Sox2_MA0143.3	8	0	-	0	0	.
chr17	43592251	43592252	chr17:43592252:G:C	rs73987538	G	C	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr17	43610241	43610242	chr17:43610242:A:G	rs2880540	A	G	A	Sox2_MA0143.3	13	0	-	0	0	.
chr17	43632898	43632899	chr17:43632899:A:G	rs9890545	A	G	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr17	43665132	43665133	chr17:43665133:G:A	rs4793012	G	A	G	Sox2_MA0143.3	7	1	+	8.864090315184848	3.5547341015215945	CCTTTGTG
chr17	43669999	43670000	chr17:43670000:G:A	rs532474449	G	A	G	Sox2_MA0143.3	27	0	-	0	0	.
chr17	43720997	43720998	chr17:43720998:C:T	rs145888953	C	T	C	Sox2_MA0143.3	22	0	-	0	0	.
chr17	43732944	43732945	chr17:43732945:G:A	rs8071941	G	A	A	Sox2_MA0143.3	-1	0	-	0	0	.
chr17	43760291	43760292	chr17:43760292:T:C	rs2023794	T	C	T	Sox2_MA0143.3	7	1	+	9.613475778572903	9.019595766176417	CCATTGTT
chr17	43944270	43944271	chr17:43944271:C:G	rs546384619	C	G	C	Sox2_MA0143.3	12	0	-	0	0	.
chr17	44012375	44012376	chr17:44012376:G:C	rs72822640	G	C	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr17	44024603	44024604	chr17:44024604:G:A	rs62078878	G	A	G	Sox2_MA0143.3	7	1	+	8.676919043985553	3.3675628303222993	CCATTGTG
chr17	44069285	44069286	chr17:44069286:C:T	rs62078913	C	T	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr17	44070714	44070715	chr17:44070715:G:A	rs562824533	G	A	G	Sox2_MA0143.3	0	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr17	44141888	44141889	chr17:44141889:A:G	chr17:44141889:A:G	A	G	A	Sox2_MA0143.3	16	0	+	0	0	.
chr17	44141898	44141899	chr17:44141899:G:A	rs74635090	G	A	G	Sox2_MA0143.3	26	0	+	0	0	.
chr17	44192318	44192319	chr17:44192319:G:A	rs73316162	G	A	G	Sox2_MA0143.3	9	0	-	0	0	.
chr17	44199257	44199258	chr17:44199258:G:A	rs1044559043	G	A	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr17	44363268	44363269	chr17:44363269:G:A	rs139816223	G	A	G	Sox2_MA0143.3	20	0	-	0	0	.
chr17	44363294	44363295	chr17:44363295:G:A	rs537424344	G	A	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr17	44367329	44367330	chr17:44367330:C:G	rs114938216	C	G	C	Sox2_MA0143.3	14	0	+	0	0	.
chr17	44533820	44533821	chr17:44533821:C:G	rs35392505	C	G	C	Sox2_MA0143.3	12	0	+	0	0	.
chr17	44594123	44594124	chr17:44594124:A:G	rs35064996	A	G	A	Sox2_MA0143.3	-19	0	+	0	0	.
chr17	44624627	44624628	chr17:44624628:A:G	rs11657034	A	G	G	Sox2_MA0143.3	19	0	-	0	0	.
chr17	44821066	44821067	chr17:44821067:T:C	rs142661862	T	C	T	Sox2_MA0143.3	-17	0	+	0	0	.
chr17	44821110	44821111	chr17:44821111:G:C	rs75240846	G	C	G	Sox2_MA0143.3	27	0	+	0	0	.
chr17	44828172	44828173	chr17:44828173:C:T	rs75081829	C	T	C	Sox2_MA0143.3	5	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr17	44877858	44877859	chr17:44877859:C:T	rs11652831	C	T	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr17	44946798	44946799	chr17:44946799:A:G	rs139296776	A	G	A	Sox2_MA0143.3	-19	0	-	0	0	.
chr17	44981299	44981300	chr17:44981300:A:G	rs60167456	A	G	A	Sox2_MA0143.3	2	1	-	3.5547341015215945	-2.751084876953981	CCTTTGTA
chr17	45023197	45023198	chr17:45023198:C:G	rs7220212	C	G	C	Sox2_MA0143.3	5	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr17	45038802	45038803	chr17:45038803:C:T	rs902435743	C	T	-	Sox2_MA0143.3	-7	0	-	0	0	.
chr17	45061629	45061630	chr17:45061630:T:C	rs183422777	T	C	T	Sox2_MA0143.3	20	0	+	0	0	.
chr17	45095480	45095481	chr17:45095481:T:C	rs11871043	T	C	C	Sox2_MA0143.3	9	0	+	0	0	.
chr17	45095904	45095905	chr17:45095905:T:C	rs2301597	T	C	T	Sox2_MA0143.3	-17	0	+	0	0	.
chr17	45128020	45128021	chr17:45128021:C:T	rs150108850	C	T	C	Sox2_MA0143.3	22	0	-	0	0	.
chr17	45171497	45171498	chr17:45171498:A:G	rs73984341	A	G	A	Sox2_MA0143.3	22	0	-	0	0	.
chr17	45171878	45171879	chr17:45171879:G:T	rs78420531	G	T	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr17	45172808	45172809	chr17:45172809:C:G	rs550225531	C	G	c	Sox2_MA0143.3	15	0	-	0	0	.
chr17	45183926	45183927	chr17:45183927:C:T	rs956681868	C	T	C	Sox2_MA0143.3	26	0	+	0	0	.
chr17	45228937	45228938	chr17:45228938:C:G	rs11079492	C	G	C	Sox2_MA0143.3	1	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr17	45248538	45248539	chr17:45248539:C:T	rs74625254	C	T	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr17	45263263	45263264	chr17:45263264:C:T	rs1047841	C	T	C	Sox2_MA0143.3	13	0	-	0	0	.
chr17	45332286	45332287	chr17:45332287:G:T	rs35457051	G	T	G	Sox2_MA0143.3	26	0	+	0	0	.
chr17	45361063	45361064	chr17:45361064:A:G	rs12945838	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr17	45365033	45365034	chr17:45365034:G:A	rs138480559	G	A	G	Sox2_MA0143.3	10	0	-	0	0	.
chr17	45402381	45402382	chr17:45402382:T:C	rs55793500	T	C	.	Sox2_MA0143.3	19	0	-	0	0	.
chr17	45464260	45464261	chr17:45464261:C:A	rs2139890	C	A	C	Sox2_MA0143.3	0	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr17	45576449	45576450	chr17:45576450:C:T	rs2696653	C	T	.	Sox2_MA0143.3	-5	0	-	0	0	.
chr17	45654529	45654530	chr17:45654530:C:T	rs241035	C	T	C	Sox2_MA0143.3	11	0	+	0	0	.
chr17	45702257	45702258	chr17:45702258:C:T	rs1526128	C	T	C	Sox2_MA0143.3	22	0	+	0	0	.
chr17	45715528	45715529	chr17:45715529:T:G	rs1568951	T	G	G	Sox2_MA0143.3	7	1	+	9.613475778572903	8.676919043985553	CCATTGTT
chr17	45715529	45715530	chr17:45715530:T:C	rs1568950	T	C	C	Sox2_MA0143.3	8	0	+	0	0	.
chr17	45716060	45716061	chr17:45716061:C:A	rs1105568	C	A	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr17	45745959	45745960	chr17:45745960:A:G	rs75643244	A	G	G	Sox2_MA0143.3	16	0	+	0	0	.
chr17	45851583	45851584	chr17:45851584:C:G	rs73313152	C	G	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr17	45859966	45859967	chr17:45859967:T:G	rs62054844	T	G	G	Sox2_MA0143.3	-3	0	+	0	0	.
chr17	45863983	45863984	chr17:45863984:C:T	rs62055461	C	T	C	Sox2_MA0143.3	17	0	+	0	0	.
chr17	45874350	45874351	chr17:45874351:G:A	rs2055794	G	A	A	Sox2_MA0143.3	25	0	+	0	0	.
chr17	45882551	45882552	chr17:45882552:T:A	rs2019822	T	A	A	Sox2_MA0143.3	3	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr17	45918565	45918566	chr17:45918566:C:G	rs8076152	C	G	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr17	45967618	45967619	chr17:45967619:A:G	rs17572147	A	G	G	Sox2_MA0143.3	-3	0	-	0	0	.
chr17	45992401	45992402	chr17:45992402:A:G	rs74759276	A	G	A	Sox2_MA0143.3	-4	0	-	0	0	.
chr17	46031539	46031540	chr17:46031540:A:G	rs34579536	A	G	G	Sox2_MA0143.3	3	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr17	46100905	46100906	chr17:46100906:C:T	rs17576779	C	T	C	Sox2_MA0143.3	27	0	-	0	0	.
chr17	46100942	46100943	chr17:46100943:C:T	rs920877473	C	T	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr17	46114116	46114117	chr17:46114117:A:G	rs11653367	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr17	46143983	46143984	chr17:46143984:G:A	rs2532307	G	A	A	Sox2_MA0143.3	-3	0	-	0	0	.
chr17	46191780	46191781	chr17:46191781:G:A	rs77560892	G	A	G	Sox2_MA0143.3	14	0	-	0	0	.
chr17	46193975	46193976	chr17:46193976:C:G	rs532250265	C	G	C	Sox2_MA0143.3	9	0	+	0	0	.
chr17	46248386	46248387	chr17:46248387:T:C	rs374589706	T	C	T	Sox2_MA0143.3	6	1	+	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr17	46289144	46289145	chr17:46289145:C:A	rs2957298	C	A	.	Sox2_MA0143.3	23	0	+	0	0	.
chr17	46734568	46734569	chr17:46734569:G:A	rs117545992	G	A	G	Sox2_MA0143.3	8	0	-	0	0	.
chr17	46771573	46771574	chr17:46771574:C:A	rs528610604	C	A	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr17	46776505	46776506	chr17:46776506:G:A	rs199520	G	A	G	Sox2_MA0143.3	21	0	+	0	0	.
chr17	46803625	46803626	chr17:46803626:C:T	rs114578142	C	T	C	Sox2_MA0143.3	12	0	-	0	0	.
chr17	46916913	46916914	chr17:46916914:C:T	rs1623402	C	T	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr17	46930265	46930266	chr17:46930266:A:G	rs11655668	A	G	G	Sox2_MA0143.3	6	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr17	46940278	46940279	chr17:46940279:T:C	rs4968286	T	C	T	Sox2_MA0143.3	10	0	+	0	0	.
chr17	46943582	46943583	chr17:46943583:C:T	rs74780658	C	T	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr17	46943595	46943596	chr17:46943596:G:T	rs146130832	G	T	G	Sox2_MA0143.3	5	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr17	46989719	46989720	chr17:46989720:C:T	rs6504640	C	T	.	Sox2_MA0143.3	13	0	-	0	0	.
chr17	47241085	47241086	chr17:47241086:C:A	rs16969966	C	A	C	Sox2_MA0143.3	16	0	-	0	0	.
chr17	47291335	47291336	chr17:47291336:A:G	rs1276036024	A	G	A	Sox2_MA0143.3	-9	0	+	0	0	.
chr17	47324764	47324765	chr17:47324765:C:T	rs181167491	C	T	C	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr17	47423583	47423584	chr17:47423584:G:C	rs569849420	G	C	-	Sox2_MA0143.3	12	0	+	0	0	.
chr17	47776599	47776600	chr17:47776600:A:C	rs4793646	A	C	A	Sox2_MA0143.3	14	0	-	0	0	.
chr17	47804579	47804580	chr17:47804580:T:G	rs55977020	T	G	T	Sox2_MA0143.3	3	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr17	47938602	47938603	chr17:47938603:T:C	rs3764396	T	C	T	Sox2_MA0143.3	4	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr17	47995298	47995299	chr17:47995299:G:A	rs2597166	G	A	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr17	47995313	47995314	chr17:47995314:A:G	rs141608552	A	G	A	Sox2_MA0143.3	2	1	+	9.613475778572903	3.494828071296623	CCATTGTT
chr17	47995335	47995336	chr17:47995336:A:G	rs1181770782	A	G	A	Sox2_MA0143.3	24	0	+	0	0	.
chr17	48052067	48052068	chr17:48052068:C:T	rs568598577	C	T	C	Sox2_MA0143.3	15	0	+	0	0	.
chr17	48111057	48111058	chr17:48111058:C:T	rs77028374	C	T	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr17	48160627	48160628	chr17:48160628:A:G	rs12947089	A	G	A	Sox2_MA0143.3	14	0	-	0	0	.
chr17	48194418	48194419	chr17:48194419:G:A	rs80075676	G	A	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr17	48294987	48294988	chr17:48294988:T:C	rs16954904	T	C	T	Sox2_MA0143.3	-8	0	-	0	0	.
chr17	48478382	48478383	chr17:48478383:T:C	rs16957364	T	C	T	Sox2_MA0143.3	3	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr17	48500653	48500654	chr17:48500654:G:A	rs60681913	G	A	G	Sox2_MA0143.3	-12	0	+	0	0	.
chr17	48510968	48510969	chr17:48510969:C:T	rs2036764	C	T	C	Sox2_MA0143.3	23	0	-	0	0	.
chr17	48542525	48542526	chr17:48542526:T:C	rs116109572	T	C	T	Sox2_MA0143.3	18	0	+	0	0	.
chr17	48568651	48568652	chr17:48568652:G:C	rs7502015	G	C	C	Sox2_MA0143.3	19	0	-	0	0	.
chr17	48865318	48865319	chr17:48865319:G:A	rs11657868	G	A	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr17	49078329	49078330	chr17:49078330:C:T	rs11868092	C	T	T	Sox2_MA0143.3	-20	0	-	0	0	.
chr17	49435401	49435402	chr17:49435402:G:C	rs74884324	G	C	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr17	49438287	49438288	chr17:49438288:G:T	rs1000727995	G	T	G	Sox2_MA0143.3	27	0	+	0	0	.
chr17	49459611	49459612	chr17:49459612:G:A	rs114967392	G	A	G	Sox2_MA0143.3	27	0	-	0	0	.
chr17	49459638	49459639	chr17:49459639:G:C	rs9906836	G	C	G	Sox2_MA0143.3	0	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr17	49489223	49489224	chr17:49489224:C:A	rs2537710	C	A	a	Sox2_MA0143.3	14	0	+	0	0	.
chr17	49496053	49496054	chr17:49496054:G:A	rs113488827	G	A	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr17	49550570	49550571	chr17:49550571:T:C	rs117265533	T	C	T	Sox2_MA0143.3	11	0	+	0	0	.
chr17	49566229	49566230	chr17:49566230:A:T	rs556064615	A	T	A	Sox2_MA0143.3	26	0	-	0	0	.
chr17	49681687	49681688	chr17:49681688:G:A	rs76146216	G	A	G	Sox2_MA0143.3	26	0	-	0	0	.
chr17	49697861	49697862	chr17:49697862:C:A	rs4997224	C	A	A	Sox2_MA0143.3	22	0	-	0	0	.
chr17	49705502	49705503	chr17:49705503:G:T	rs75764946	G	T	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr17	49816191	49816192	chr17:49816192:G:A	rs763394117	G	A	G	Sox2_MA0143.3	-3	0	+	0	0	.
chr17	49910557	49910558	chr17:49910558:T:C	rs271638	T	C	C	Sox2_MA0143.3	10	0	+	0	0	.
chr17	49938818	49938819	chr17:49938819:A:G	rs172033	A	G	A	Sox2_MA0143.3	18	0	-	0	0	.
chr17	49970138	49970139	chr17:49970139:C:T	rs1811329	C	T	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr17	49987776	49987777	chr17:49987777:G:A	rs16948563	G	A	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr17	50021215	50021216	chr17:50021216:G:A	rs181668330	G	A	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr17	50026745	50026746	chr17:50026746:A:G	rs11653741	A	G	A	Sox2_MA0143.3	14	0	-	0	0	.
chr17	50026770	50026771	chr17:50026771:C:G	rs1863504	C	G	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr17	50027863	50027864	chr17:50027864:C:T	chr17:50027864:C:T	C	T	C	Sox2_MA0143.3	23	0	-	0	0	.
chr17	50051713	50051714	chr17:50051714:C:T	rs73330511	C	T	C	Sox2_MA0143.3	22	0	+	0	0	.
chr17	50081836	50081837	chr17:50081837:A:G	rs875511	A	G	A	Sox2_MA0143.3	10	0	+	0	0	.
chr17	50097072	50097073	chr17:50097073:T:C	rs7216539	T	C	C	Sox2_MA0143.3	6	1	+	9.206767037375712	2.298012258060492	CCTTTGTC
chr17	50115036	50115037	chr17:50115037:G:A	rs186208588	G	A	G	Sox2_MA0143.3	11	0	+	0	0	.
chr17	50115048	50115049	chr17:50115049:C:T	rs933550444	C	T	C	Sox2_MA0143.3	23	0	+	0	0	.
chr17	50181138	50181139	chr17:50181139:C:T	rs113502904	C	T	C	Sox2_MA0143.3	5	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr17	50195793	50195794	chr17:50195794:A:C	rs2586494	A	C	C	Sox2_MA0143.3	13	0	-	0	0	.
chr17	50196077	50196078	chr17:50196078:T:C	rs2734281	T	C	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr17	50196102	50196103	chr17:50196103:T:C	rs2141279	T	C	C	Sox2_MA0143.3	23	0	+	0	0	.
chr17	50210272	50210273	chr17:50210273:T:C	rs115748937	T	C	T	Sox2_MA0143.3	-13	0	+	0	0	.
chr17	50364635	50364636	chr17:50364636:G:A	rs8070257	G	A	G	Sox2_MA0143.3	5	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr17	50399202	50399203	chr17:50399203:C:T	rs12449309	C	T	C	Sox2_MA0143.3	13	0	-	0	0	.
chr17	50448779	50448780	chr17:50448780:G:A	rs979772390	G	A	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr17	50479420	50479421	chr17:50479421:A:T	rs546251962	A	T	A	Sox2_MA0143.3	6	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr17	50550972	50550973	chr17:50550973:C:T	rs770847509	C	T	C	Sox2_MA0143.3	11	0	-	0	0	.
chr17	50560341	50560342	chr17:50560342:A:G	rs75408545	A	G	A	Sox2_MA0143.3	4	1	-	9.206767037375712	2.2980122580604916	CCTTTGTC
chr17	50629820	50629821	chr17:50629821:T:C	rs757420	T	C	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr17	50636206	50636207	chr17:50636207:T:G	rs4148405	T	G	G	Sox2_MA0143.3	3	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr17	50647167	50647168	chr17:50647168:T:C	rs9893660	T	C	C	Sox2_MA0143.3	6	1	+	8.676919043985553	1.7681642646703326	CCATTGTG
chr17	50691124	50691125	chr17:50691125:A:G	rs1051640	A	G	A	Sox2_MA0143.3	-13	0	-	0	0	.
chr17	50832246	50832247	chr17:50832247:C:A	rs4533326	C	A	A	Sox2_MA0143.3	-18	0	+	0	0	.
chr17	50835126	50835127	chr17:50835127:G:T	rs148567141	G	T	G	Sox2_MA0143.3	17	0	-	0	0	.
chr17	50865224	50865225	chr17:50865225:A:G	rs76008726	A	G	A	Sox2_MA0143.3	2	1	-	9.206767037375712	2.900948058900136	CCTTTGTC
chr17	50918165	50918166	chr17:50918166:A:G	rs8072423	A	G	a	Sox2_MA0143.3	-7	0	-	0	0	.
chr17	51140255	51140256	chr17:51140256:A:C	rs9303575	A	C	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr17	51151283	51151284	chr17:51151284:G:T	rs12937424	G	T	g	Sox2_MA0143.3	1	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr17	51153880	51153881	chr17:51153881:A:T	rs143076142	A	T	A	Sox2_MA0143.3	27	0	+	0	0	.
chr17	51399392	51399393	chr17:51399393:C:G	rs12944659	C	G	A	Sox2_MA0143.3	15	0	-	0	0	.
chr17	51435084	51435085	chr17:51435085:C:T	rs35590639	C	T	T	Sox2_MA0143.3	-7	0	+	0	0	.
chr17	51438177	51438178	chr17:51438178:T:C	rs3886570	T	C	T	Sox2_MA0143.3	2	1	+	9.800647049772198	3.494828071296623	CCTTTGTT
chr17	51714626	51714627	chr17:51714627:C:A	rs11650892	C	A	C	Sox2_MA0143.3	26	0	-	0	0	.
chr17	51818969	51818970	chr17:51818970:C:T	rs74412058	C	T	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr17	51933458	51933459	chr17:51933459:G:A	rs203094	G	A	G	Sox2_MA0143.3	11	0	-	0	0	.
chr17	52695542	52695543	chr17:52695543:T:C	rs1343952	T	C	T	Sox2_MA0143.3	-18	0	+	0	0	.
chr17	52882799	52882800	chr17:52882800:T:C	rs56334548	T	C	T	Sox2_MA0143.3	11	0	+	0	0	.
chr17	52969037	52969038	chr17:52969038:G:C	rs9303612	G	C	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr17	53273041	53273042	chr17:53273042:A:G	rs1521450	A	G	A	Sox2_MA0143.3	14	0	-	0	0	.
chr17	53317152	53317153	chr17:53317153:C:T	rs806909	C	T	T	Sox2_MA0143.3	8	0	+	0	0	.
chr17	53435141	53435142	chr17:53435142:A:T	rs140719261	A	T	A	Sox2_MA0143.3	8	0	-	0	0	.
chr17	53797777	53797778	chr17:53797778:A:G	rs9916674	A	G	G	Sox2_MA0143.3	7	1	-	9.613475778572903	9.019595766176417	CCATTGTT
chr17	53822900	53822901	chr17:53822901:G:A	rs12939320	G	A	G	Sox2_MA0143.3	20	0	-	0	0	.
chr17	53822903	53822904	chr17:53822904:G:A	rs7215075	G	A	G	Sox2_MA0143.3	17	0	-	0	0	.
chr17	53822906	53822907	chr17:53822907:C:T	rs113521969	C	T	C	Sox2_MA0143.3	14	0	-	0	0	.
chr17	54031729	54031730	chr17:54031730:C:A	rs9901363	C	A	A	Sox2_MA0143.3	1	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr17	54351382	54351383	chr17:54351383:A:G	rs871777	A	G	A	Sox2_MA0143.3	23	0	-	0	0	.
chr17	54372478	54372479	chr17:54372479:T:G	rs11868003	T	G	T	Sox2_MA0143.3	7	1	+	9.800647049772198	8.864090315184848	CCTTTGTT
chr17	54477725	54477726	chr17:54477726:G:A	rs7217289	G	A	G	Sox2_MA0143.3	22	0	+	0	0	.
chr17	54509000	54509001	chr17:54509001:G:T	rs72834491	G	T	G	Sox2_MA0143.3	-14	0	+	0	0	.
chr17	54789415	54789416	chr17:54789416:T:G	rs2907629	T	G	T	Sox2_MA0143.3	6	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr17	54789422	54789423	chr17:54789423:T:G	rs2907630	T	G	T	Sox2_MA0143.3	13	0	+	0	0	.
chr17	54792184	54792185	chr17:54792185:A:G	rs11079129	A	G	A	Sox2_MA0143.3	-5	0	-	0	0	.
chr17	54906879	54906880	chr17:54906880:T:C	rs75358646	T	C	T	Sox2_MA0143.3	4	1	+	9.800647049772198	2.8918922704569785	CCTTTGTT
chr17	54945504	54945505	chr17:54945505:G:T	rs12936375	G	T	T	Sox2_MA0143.3	-11	0	+	0	0	.
chr17	54967457	54967458	chr17:54967458:C:T	rs76564047	C	T	C	Sox2_MA0143.3	12	0	-	0	0	.
chr17	54968961	54968962	chr17:54968962:A:C	chr17:54968962:A:C	A	C	A	Sox2_MA0143.3	-5	0	+	0	0	.
chr17	55016603	55016604	chr17:55016604:G:C	rs2787501	G	C	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr17	55116359	55116360	chr17:55116360:A:G	rs11869357	A	G	A	Sox2_MA0143.3	6	1	-	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr17	55116780	55116781	chr17:55116781:C:T	rs244354	C	T	T	Sox2_MA0143.3	12	0	+	0	0	.
chr17	55175657	55175658	chr17:55175658:C:T	rs1601297	C	T	T	Sox2_MA0143.3	12	0	-	0	0	.
chr17	55277433	55277434	chr17:55277434:C:A	rs7218159	C	A	T	Sox2_MA0143.3	24	0	-	0	0	.
chr17	55296421	55296422	chr17:55296422:C:T	rs141413025	C	T	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr17	55318246	55318247	chr17:55318247:C:T	rs538792912	C	T	C	Sox2_MA0143.3	11	0	-	0	0	.
chr17	55568824	55568825	chr17:55568825:C:A	rs16968954	C	A	C	Sox2_MA0143.3	-12	0	-	0	0	.
chr17	55571087	55571088	chr17:55571088:T:C	rs77281251	T	C	T	Sox2_MA0143.3	-4	0	+	0	0	.
chr17	55588974	55588975	chr17:55588975:A:G	rs16956088	A	G	A	Sox2_MA0143.3	26	0	-	0	0	.
chr17	55588986	55588987	chr17:55588987:G:A	rs17819647	G	A	G	Sox2_MA0143.3	14	0	-	0	0	.
chr17	55633124	55633125	chr17:55633125:C:T	chr17:55633125:C:T	C	T	C	Sox2_MA0143.3	22	0	+	0	0	.
chr17	55808847	55808848	chr17:55808848:C:T	rs12941753	C	T	C	Sox2_MA0143.3	-12	0	-	0	0	.
chr17	55830973	55830974	chr17:55830974:C:T	rs2198520	C	T	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr17	56083809	56083810	chr17:56083810:G:T	rs17820956	G	T	G	Sox2_MA0143.3	5	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr17	56153555	56153556	chr17:56153556:C:A	rs9906210	C	A	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr17	56478957	56478958	chr17:56478958:G:T	rs115250472	G	T	G	Sox2_MA0143.3	-16	0	-	0	0	.
chr17	56479528	56479529	chr17:56479529:G:C	rs17820450	G	C	G	Sox2_MA0143.3	1	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr17	56626113	56626114	chr17:56626114:C:T	rs4794653	C	T	C	Sox2_MA0143.3	26	0	+	0	0	.
chr17	56662153	56662154	chr17:56662154:T:C	rs16957584	T	C	T	Sox2_MA0143.3	2	1	-	9.613475778572903	3.494828071296623	CCATTGTT
chr17	56708674	56708675	chr17:56708675:T:C	rs227709	T	C	C	Sox2_MA0143.3	16	0	-	0	0	.
chr17	56708708	56708709	chr17:56708709:C:A	rs62075156	C	A	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr17	56784964	56784965	chr17:56784965:T:C	rs11872062	T	C	T	Sox2_MA0143.3	-9	0	+	0	0	.
chr17	56881978	56881979	chr17:56881979:C:T	rs62072716	C	T	T	Sox2_MA0143.3	7	1	+	9.019595766176417	9.613475778572903	CCATTGTC
chr17	56986997	56986998	chr17:56986998:T:G	rs7209525	T	G	T	Sox2_MA0143.3	4	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr17	57016583	57016584	chr17:57016584:A:C	rs78132683	A	C	A	Sox2_MA0143.3	15	0	-	0	0	.
chr17	57040260	57040261	chr17:57040261:C:A	rs2332850	C	A	C	Sox2_MA0143.3	27	0	+	0	0	.
chr17	57091041	57091042	chr17:57091042:G:A	rs72843424	G	A	G	Sox2_MA0143.3	-3	0	+	0	0	.
chr17	57097724	57097725	chr17:57097725:C:T	rs113300398	C	T	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr17	57121058	57121059	chr17:57121059:C:T	rs6967	C	T	T	Sox2_MA0143.3	-13	0	-	0	0	.
chr17	57211012	57211013	chr17:57211013:C:T	rs62057990	C	T	C	Sox2_MA0143.3	18	0	-	0	0	.
chr17	57341832	57341833	chr17:57341833:C:A	rs74567975	C	A	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr17	57357651	57357652	chr17:57357652:C:T	rs792379	C	T	C	Sox2_MA0143.3	12	0	+	0	0	.
chr17	57407551	57407552	chr17:57407552:C:A	rs62060395	C	A	C	Sox2_MA0143.3	0	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr17	57407569	57407570	chr17:57407570:C:T	rs148836588	C	T	C	Sox2_MA0143.3	18	0	+	0	0	.
chr17	57420387	57420388	chr17:57420388:C:G	rs9901780	C	G	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr17	57430224	57430225	chr17:57430225:T:C	rs11652711	T	C	T	Sox2_MA0143.3	-17	0	+	0	0	.
chr17	57454268	57454269	chr17:57454269:G:A	rs720237	G	A	G	Sox2_MA0143.3	15	0	-	0	0	.
chr17	57454280	57454281	chr17:57454281:A:G	rs720238	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr17	57455417	57455418	chr17:57455418:A:G	rs146492686	A	G	A	Sox2_MA0143.3	8	0	+	0	0	.
chr17	57459223	57459224	chr17:57459224:G:C	rs16958441	G	C	G	Sox2_MA0143.3	5	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr17	57490271	57490272	chr17:57490272:C:T	rs2332932	C	T	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr17	57565473	57565474	chr17:57565474:G:A	rs62058106	G	A	G	Sox2_MA0143.3	20	0	+	0	0	.
chr17	57576927	57576928	chr17:57576928:C:T	rs9899228	C	T	T	Sox2_MA0143.3	5	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr17	57653275	57653276	chr17:57653276:T:G	rs12952205	T	G	T	Sox2_MA0143.3	-2	0	-	0	0	.
chr17	57668549	57668550	chr17:57668550:G:A	rs547530860	G	A	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr17	57717507	57717508	chr17:57717508:C:T	rs6503829	C	T	T	Sox2_MA0143.3	8	0	-	0	0	.
chr17	57746190	57746191	chr17:57746191:C:T	rs8077059	C	T	C	Sox2_MA0143.3	5	1	-	8.676919043985553	1.7681642646703324	CCATTGTG
chr17	57755468	57755469	chr17:57755469:T:C	rs7207338	T	C	T	Sox2_MA0143.3	-16	0	+	0	0	.
chr17	57772705	57772706	chr17:57772706:T:C	rs9891768	T	C	T	Sox2_MA0143.3	-20	0	-	0	0	.
chr17	57776131	57776132	chr17:57776132:T:C	rs2685486	T	C	C	Sox2_MA0143.3	3	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr17	57776132	57776133	chr17:57776133:T:C	rs55857700	T	C	C	Sox2_MA0143.3	4	1	+	3.5547341015215945	-3.3540206777936254	CCTTTGTA
chr17	57850410	57850411	chr17:57850411:G:A	rs73992323	G	A	G	Sox2_MA0143.3	14	0	-	0	0	.
chr17	57850439	57850440	chr17:57850440:C:T	rs77771777	C	T	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr17	57888662	57888663	chr17:57888663:G:A	rs527648616	G	A	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr17	57949369	57949370	chr17:57949370:C:G	rs530237859	C	G	C	Sox2_MA0143.3	21	0	+	0	0	.
chr17	57983431	57983432	chr17:57983432:C:T	rs35869410	C	T	C	Sox2_MA0143.3	7	1	-	8.676919043985553	3.3675628303222993	CCATTGTG
chr17	57987939	57987940	chr17:57987940:G:A	rs565632247	G	A	G	Sox2_MA0143.3	15	0	-	0	0	.
chr17	57987974	57987975	chr17:57987975:A:G	rs571167211	A	G	A	Sox2_MA0143.3	-20	0	-	0	0	.
chr17	58082803	58082804	chr17:58082804:G:T	rs192106815	G	T	g	Sox2_MA0143.3	25	0	-	0	0	.
chr17	58084411	58084412	chr17:58084412:T:G	rs187040181	T	G	t	Sox2_MA0143.3	-13	0	+	0	0	.
chr17	58089137	58089138	chr17:58089138:T:C	rs16942662	T	C	t	Sox2_MA0143.3	13	0	+	0	0	.
chr17	58113131	58113132	chr17:58113132:A:G	rs114862413	A	G	A	Sox2_MA0143.3	13	0	+	0	0	.
chr17	58114373	58114374	chr17:58114374:G:A	rs181226	G	A	G	Sox2_MA0143.3	9	0	+	0	0	.
chr17	58122178	58122179	chr17:58122179:A:G	rs75604770	A	G	A	Sox2_MA0143.3	23	0	+	0	0	.
chr17	58250214	58250215	chr17:58250215:G:A	rs142368326	G	A	G	Sox2_MA0143.3	15	0	+	0	0	.
chr17	58250889	58250890	chr17:58250890:T:A	rs8178340	T	A	T	Sox2_MA0143.3	-14	0	-	0	0	.
chr17	58281522	58281523	chr17:58281523:A:G	rs2243828	A	G	A	Sox2_MA0143.3	18	0	+	0	0	.
chr17	58291463	58291464	chr17:58291464:A:C	rs11871743	A	C	a	Sox2_MA0143.3	-13	0	-	0	0	.
chr17	58295709	58295710	chr17:58295710:T:C	rs16942914	T	C	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr17	58298844	58298845	chr17:58298845:C:T	rs34770605	C	T	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr17	58305150	58305151	chr17:58305151:C:T	rs11867412	C	T	C	Sox2_MA0143.3	0	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr17	58323691	58323692	chr17:58323692:T:C	rs62084582	T	C	T	Sox2_MA0143.3	-16	0	+	0	0	.
chr17	58336126	58336127	chr17:58336127:G:A	rs1017976256	G	A	G	Sox2_MA0143.3	14	0	-	0	0	.
chr17	58338436	58338437	chr17:58338437:C:T	rs367950661	C	T	C	Sox2_MA0143.3	9	0	+	0	0	.
chr17	58366183	58366184	chr17:58366184:G:A	rs2526371	G	A	A	Sox2_MA0143.3	-10	0	-	0	0	.
chr17	58394933	58394934	chr17:58394934:G:A	rs7216856	G	A	G	Sox2_MA0143.3	0	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr17	58528116	58528117	chr17:58528117:G:A	rs115179582	G	A	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr17	58699786	58699787	chr17:58699787:T:C	rs405684	T	C	c	Sox2_MA0143.3	-12	0	+	0	0	.
chr17	58786545	58786546	chr17:58786546:C:A	rs760783624	C	A	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr17	58911967	58911968	chr17:58911968:T:G	rs117327491	T	G	T	Sox2_MA0143.3	22	0	-	0	0	.
chr17	59152354	59152355	chr17:59152355:G:A	rs7502947	G	A	A	Sox2_MA0143.3	12	0	-	0	0	.
chr17	59334489	59334490	chr17:59334490:A:G	rs11079371	A	G	A	Sox2_MA0143.3	2	1	+	8.676919043985553	2.5582713367092715	CCATTGTG
chr17	59334503	59334504	chr17:59334504:G:A	rs11079372	G	A	G	Sox2_MA0143.3	16	0	+	0	0	.
chr17	59426755	59426756	chr17:59426756:T:C	rs73996448	T	C	T	Sox2_MA0143.3	17	0	+	0	0	.
chr17	59678218	59678219	chr17:59678219:A:G	rs6503933	A	G	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr17	59685509	59685510	chr17:59685510:T:C	rs2271303	T	C	T	Sox2_MA0143.3	-3	0	+	0	0	.
chr17	59818858	59818859	chr17:59818859:T:A	rs2333617	T	A	A	Sox2_MA0143.3	-18	0	+	0	0	.
chr17	60008168	60008169	chr17:60008169:T:C	rs746542756	T	C	.	Sox2_MA0143.3	23	0	-	0	0	.
chr17	60040067	60040068	chr17:60040068:T:C	rs16943973	T	C	t	Sox2_MA0143.3	-8	0	-	0	0	.
chr17	60249686	60249687	chr17:60249687:A:G	rs78812326	A	G	A	Sox2_MA0143.3	14	0	+	0	0	.
chr17	60329056	60329057	chr17:60329057:C:G	rs7221837	C	G	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr17	60565439	60565440	chr17:60565440:G:A	rs1197060	G	A	A	Sox2_MA0143.3	-11	0	+	0	0	.
chr17	60602844	60602845	chr17:60602845:T:A	rs114726824	T	A	T	Sox2_MA0143.3	-12	0	-	0	0	.
chr17	60744096	60744097	chr17:60744097:G:C	rs73334334	G	C	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr17	60799057	60799058	chr17:60799058:C:A	rs1322020765	C	A	C	Sox2_MA0143.3	21	0	+	0	0	.
chr17	60928229	60928230	chr17:60928230:T:G	rs9894263	T	G	T	Sox2_MA0143.3	22	0	+	0	0	.
chr17	60940451	60940452	chr17:60940452:T:A	rs7225581	T	A	A	Sox2_MA0143.3	2	1	+	9.800647049772198	9.613475778572903	CCTTTGTT
chr17	61010189	61010190	chr17:61010190:G:A	rs114392055	G	A	G	Sox2_MA0143.3	5	1	+	9.613475778572903	2.7047209992576837	CCATTGTT
chr17	61099520	61099521	chr17:61099521:A:T	rs112559795	A	T	T	Sox2_MA0143.3	7	1	+	3.5547341015215945	9.800647049772198	CCTTTGTA
chr17	61179488	61179489	chr17:61179489:A:G	rs919836923	A	G	A	Sox2_MA0143.3	-13	0	+	0	0	.
chr17	61250926	61250927	chr17:61250927:G:T	rs748008780	G	T	G	Sox2_MA0143.3	-3	0	+	0	0	.
chr17	61295564	61295565	chr17:61295565:T:C	rs7222004	T	C	C	Sox2_MA0143.3	7	1	+	9.800647049772198	9.206767037375712	CCTTTGTT
chr17	61381356	61381357	chr17:61381357:G:A	rs552176288	G	A	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr17	61426226	61426227	chr17:61426227:G:A	rs879577924	G	A	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr17	61426256	61426257	chr17:61426257:G:C	rs138762960	G	C	G	Sox2_MA0143.3	22	0	+	0	0	.
chr17	61758615	61758616	chr17:61758616:G:A	rs2024188	G	A	G	Sox2_MA0143.3	21	0	-	0	0	.
chr17	61898010	61898011	chr17:61898011:T:C	rs8081917	T	C	C	Sox2_MA0143.3	23	0	-	0	0	.
chr17	62017953	62017954	chr17:62017954:G:A	rs60053512	G	A	G	Sox2_MA0143.3	1	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr17	62095211	62095212	chr17:62095212:C:T	rs11869921	C	T	c	Sox2_MA0143.3	5	1	-	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr17	62540747	62540748	chr17:62540748:A:G	rs2465444	A	G	A	Sox2_MA0143.3	-7	0	+	0	0	.
chr17	62658404	62658405	chr17:62658405:T:C	rs2460301	T	C	C	Sox2_MA0143.3	25	0	-	0	0	.
chr17	62694277	62694278	chr17:62694278:C:A	rs117955114	C	A	C	Sox2_MA0143.3	-20	0	-	0	0	.
chr17	62743366	62743367	chr17:62743367:G:A	rs2041281	G	A	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr17	62768208	62768209	chr17:62768209:T:C	rs12452648	T	C	C	Sox2_MA0143.3	25	0	+	0	0	.
chr17	62791187	62791188	chr17:62791188:G:A	rs184550378	G	A	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr17	62801789	62801790	chr17:62801790:T:C	rs115345052	T	C	T	Sox2_MA0143.3	-1	0	+	0	0	.
chr17	62805039	62805040	chr17:62805040:A:G	rs9901698	A	G	G	Sox2_MA0143.3	18	0	-	0	0	.
chr17	62911311	62911312	chr17:62911312:A:G	rs183397405	A	G	A	Sox2_MA0143.3	4	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr17	62918789	62918790	chr17:62918790:A:T	rs62076574	A	T	T	Sox2_MA0143.3	18	0	-	0	0	.
chr17	62922125	62922126	chr17:62922126:G:A	rs114986240	G	A	G	Sox2_MA0143.3	25	0	+	0	0	.
chr17	63423487	63423488	chr17:63423488:A:G	rs56739066	A	G	A	Sox2_MA0143.3	13	0	-	0	0	.
chr17	63498987	63498988	chr17:63498988:C:T	rs4968650	C	T	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr17	63699177	63699178	chr17:63699178:G:C	rs3817181	G	C	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr17	63700310	63700311	chr17:63700311:C:A	rs184846571	C	A	c	Sox2_MA0143.3	23	0	+	0	0	.
chr17	63764427	63764428	chr17:63764428:T:A	rs3744293	T	A	A	Sox2_MA0143.3	7	1	+	9.800647049772198	3.5547341015215945	CCTTTGTT
chr17	63787426	63787427	chr17:63787427:T:C	rs9747164	T	C	T	Sox2_MA0143.3	25	0	+	0	0	.
chr17	63840657	63840658	chr17:63840658:T:G	rs115308886	T	G	T	Sox2_MA0143.3	2	1	+	9.800647049772198	3.494828071296623	CCTTTGTT
chr17	63930137	63930138	chr17:63930138:A:G	rs2070776	A	G	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr17	64003971	64003972	chr17:64003972:G:A	rs116131669	G	A	G	Sox2_MA0143.3	8	0	-	0	0	.
chr17	64016802	64016803	chr17:64016803:T:C	rs147262020	T	C	T	Sox2_MA0143.3	24	0	-	0	0	.
chr17	64082186	64082187	chr17:64082187:A:G	rs566525894	A	G	A	Sox2_MA0143.3	-16	0	-	0	0	.
chr17	64084370	64084371	chr17:64084371:A:T	rs4968608	A	T	T	Sox2_MA0143.3	-6	0	+	0	0	.
chr17	64084392	64084393	chr17:64084393:C:T	rs186029634	C	T	C	Sox2_MA0143.3	16	0	+	0	0	.
chr17	64085654	64085655	chr17:64085655:C:T	rs880069	C	T	C	Sox2_MA0143.3	25	0	+	0	0	.
chr17	64157855	64157856	chr17:64157856:G:T	rs149462359	G	T	G	Sox2_MA0143.3	14	0	-	0	0	.
chr17	64190451	64190452	chr17:64190452:C:G	rs1010939	C	G	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr17	64221758	64221759	chr17:64221759:G:A	rs114012284	G	A	A	Sox2_MA0143.3	1	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr17	64257604	64257605	chr17:64257605:C:T	rs34313633	C	T	C	Sox2_MA0143.3	19	0	+	0	0	.
chr17	64259489	64259490	chr17:64259490:T:C	chr17:64259490:T:C	T	C	T	Sox2_MA0143.3	21	0	-	0	0	.
chr17	64282727	64282728	chr17:64282728:T:C	rs4968715	T	C	C	Sox2_MA0143.3	22	0	-	0	0	.
chr17	64328705	64328706	chr17:64328706:G:A	rs533339939	G	A	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr17	64332225	64332226	chr17:64332226:C:G	rs4968721	C	G	G	Sox2_MA0143.3	-11	0	+	0	0	.
chr17	64339545	64339546	chr17:64339546:C:T	rs4968621	C	T	T	Sox2_MA0143.3	10	0	-	0	0	.
chr17	64357607	64357608	chr17:64357608:G:A	rs1012744509	G	A	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr17	64388312	64388313	chr17:64388313:C:G	rs73345170	C	G	C	Sox2_MA0143.3	21	0	-	0	0	.
chr17	64492359	64492360	chr17:64492360:A:G	rs8078621	A	G	G	Sox2_MA0143.3	19	0	-	0	0	.
chr17	64500023	64500024	chr17:64500024:G:C	chr17:64500024:G:C	G	C	G	Sox2_MA0143.3	16	0	+	0	0	.
chr17	64503830	64503831	chr17:64503831:G:T	chr17:64503831:G:T	G	T	G	Sox2_MA0143.3	24	0	-	0	0	.
chr17	64505500	64505501	chr17:64505501:C:G	rs185090348	C	G	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr17	64636012	64636013	chr17:64636013:G:A	rs78978657	G	A	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr17	64639018	64639019	chr17:64639019:C:A	rs80319692	C	A	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr17	64694398	64694399	chr17:64694399:G:A	rs180690210	G	A	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr17	64742514	64742515	chr17:64742515:T:C	rs35203882	T	C	.	Sox2_MA0143.3	-4	0	+	0	0	.
chr17	64929737	64929738	chr17:64929738:G:A	rs62072096	G	A	.	Sox2_MA0143.3	-14	0	-	0	0	.
chr17	65076741	65076742	chr17:65076742:A:T	rs2869082	A	T	A	Sox2_MA0143.3	-6	0	+	0	0	.
chr17	65131986	65131987	chr17:65131987:G:T	rs12325705	G	T	G	Sox2_MA0143.3	1	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr17	65156553	65156554	chr17:65156554:G:A	rs745541158	G	A	G	Sox2_MA0143.3	25	0	-	0	0	.
chr17	65182360	65182361	chr17:65182361:C:T	rs4791226	C	T	C	Sox2_MA0143.3	9	0	+	0	0	.
chr17	65271561	65271562	chr17:65271562:T:C	rs1274110370	T	C	T	Sox2_MA0143.3	-3	0	+	0	0	.
chr17	65287566	65287567	chr17:65287567:C:A	rs139387067	C	A	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr17	65328307	65328308	chr17:65328308:T:G	rs41318946	T	G	T	Sox2_MA0143.3	4	1	+	9.800647049772198	2.8918922704569785	CCTTTGTT
chr17	65556115	65556116	chr17:65556116:A:G	rs8079123	A	G	G	Sox2_MA0143.3	24	0	-	0	0	.
chr17	65565473	65565474	chr17:65565474:G:T	rs757558	G	T	G	Sox2_MA0143.3	14	0	+	0	0	.
chr17	65785172	65785173	chr17:65785173:T:G	chr17:65785173:T:G	T	G	T	Sox2_MA0143.3	-9	0	+	0	0	.
chr17	65866648	65866649	chr17:65866649:T:G	rs7209112	T	G	G	Sox2_MA0143.3	17	0	-	0	0	.
chr17	66021848	66021849	chr17:66021849:T:C	rs11654440	T	C	t	Sox2_MA0143.3	3	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr17	66054527	66054528	chr17:66054528:C:T	rs10853074	C	T	C	Sox2_MA0143.3	20	0	-	0	0	.
chr17	66054528	66054529	chr17:66054529:T:C	rs10853075	T	C	T	Sox2_MA0143.3	19	0	-	0	0	.
chr17	66215018	66215019	chr17:66215019:A:G	rs8178859	A	G	A	Sox2_MA0143.3	-5	0	+	0	0	.
chr17	66282286	66282287	chr17:66282287:G:A	rs113382405	G	A	G	Sox2_MA0143.3	27	0	+	0	0	.
chr17	66331287	66331288	chr17:66331288:T:C	rs4790913	T	C	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr17	66416881	66416882	chr17:66416882:A:G	rs77351475	A	G	A	Sox2_MA0143.3	-8	0	+	0	0	.
chr17	66509643	66509644	chr17:66509644:G:A	rs9903655	G	A	A	Sox2_MA0143.3	7	1	+	8.676919043985553	3.3675628303222993	CCATTGTG
chr17	66509661	66509662	chr17:66509662:G:A	rs228878	G	A	G	Sox2_MA0143.3	25	0	+	0	0	.
chr17	66580807	66580808	chr17:66580808:G:A	rs58268902	G	A	g	Sox2_MA0143.3	-10	0	+	0	0	.
chr17	66580828	66580829	chr17:66580829:G:A	rs11657921	G	A	G	Sox2_MA0143.3	11	0	+	0	0	.
chr17	66646804	66646805	chr17:66646805:A:G	rs1115679	A	G	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr17	66720507	66720508	chr17:66720508:T:C	rs16960114	T	C	T	Sox2_MA0143.3	4	1	+	8.864090315184848	1.9553355358696274	CCTTTGTG
chr17	66728495	66728496	chr17:66728496:G:C	rs7215972	G	C	C	Sox2_MA0143.3	14	0	+	0	0	.
chr17	66805767	66805768	chr17:66805768:C:T	rs57197682	C	T	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr17	66827089	66827090	chr17:66827090:G:A	rs56710483	G	A	g	Sox2_MA0143.3	-9	0	-	0	0	.
chr17	66844647	66844648	chr17:66844648:G:T	rs74411697	G	T	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr17	66989770	66989771	chr17:66989771:G:A	rs62072224	G	A	G	Sox2_MA0143.3	20	0	+	0	0	.
chr17	67201041	67201042	chr17:67201042:A:G	rs7218955	A	G	G	Sox2_MA0143.3	6	1	-	8.676919043985553	1.7681642646703326	CCATTGTG
chr17	67258060	67258061	chr17:67258061:G:T	rs150627343	G	T	G	Sox2_MA0143.3	22	0	-	0	0	.
chr17	67258061	67258062	chr17:67258062:C:T	rs139176879	C	T	C	Sox2_MA0143.3	21	0	-	0	0	.
chr17	67258087	67258088	chr17:67258088:A:C	rs145303148	A	C	A	Sox2_MA0143.3	-5	0	-	0	0	.
chr17	67260360	67260361	chr17:67260361:G:A	rs28703779	G	A	G	Sox2_MA0143.3	20	0	-	0	0	.
chr17	67450229	67450230	chr17:67450230:G:A	rs2949946	G	A	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr17	67469168	67469169	chr17:67469169:G:A	rs72845145	G	A	G	Sox2_MA0143.3	27	0	+	0	0	.
chr17	67474318	67474319	chr17:67474319:G:A	rs576113663	G	A	G	Sox2_MA0143.3	19	0	-	0	0	.
chr17	67542385	67542386	chr17:67542386:G:C	rs2706691	G	C	C	Sox2_MA0143.3	21	0	+	0	0	.
chr17	67572626	67572627	chr17:67572627:C:T	rs16960991	C	T	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr17	67588534	67588535	chr17:67588535:T:C	rs8071439	T	C	T	Sox2_MA0143.3	17	0	+	0	0	.
chr17	67690037	67690038	chr17:67690038:C:T	rs2934577	C	T	T	Sox2_MA0143.3	-7	0	+	0	0	.
chr17	67830744	67830745	chr17:67830745:A:G	rs12602556	A	G	A	Sox2_MA0143.3	-6	0	+	0	0	.
chr17	67922690	67922691	chr17:67922691:A:G	rs12600941	A	G	A	Sox2_MA0143.3	11	0	-	0	0	.
chr17	68053413	68053414	chr17:68053414:T:C	rs1412004087	T	C	T	Sox2_MA0143.3	2	1	-	9.613475778572903	3.494828071296623	CCATTGTT
chr17	68053414	68053415	chr17:68053415:G:A	rs7503810	G	A	G	Sox2_MA0143.3	1	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr17	68054970	68054971	chr17:68054971:G:T	rs542600573	G	T	-	Sox2_MA0143.3	8	0	+	0	0	.
chr17	68100086	68100087	chr17:68100087:G:A	rs139547546	G	A	A	Sox2_MA0143.3	-8	0	+	0	0	.
chr17	68168529	68168530	chr17:68168530:A:G	rs4968923	A	G	G	Sox2_MA0143.3	-5	0	+	0	0	.
chr17	68168531	68168532	chr17:68168532:A:G	rs4968924	A	G	A	Sox2_MA0143.3	-3	0	+	0	0	.
chr17	68208471	68208472	chr17:68208472:T:C	rs137868326	T	C	T	Sox2_MA0143.3	10	0	+	0	0	.
chr17	68227210	68227211	chr17:68227211:G:A	rs4078628	G	A	G	Sox2_MA0143.3	21	0	+	0	0	.
chr17	68392417	68392418	chr17:68392418:T:C	rs57873715	T	C	T	Sox2_MA0143.3	-12	0	-	0	0	.
chr17	68393350	68393351	chr17:68393351:C:T	rs78388256	C	T	C	Sox2_MA0143.3	8	0	+	0	0	.
chr17	68401555	68401556	chr17:68401556:G:T	rs746981186	G	T	G	Sox2_MA0143.3	7	1	+	8.864090315184848	9.800647049772198	CCTTTGTG
chr17	68457799	68457800	chr17:68457800:C:A	rs62085937	C	A	C	Sox2_MA0143.3	22	0	-	0	0	.
chr17	68457800	68457801	chr17:68457801:G:A	rs9893957	G	A	G	Sox2_MA0143.3	21	0	-	0	0	.
chr17	68512101	68512102	chr17:68512102:C:A	rs8080306	C	A	A	Sox2_MA0143.3	13	0	-	0	0	.
chr17	68567665	68567666	chr17:68567666:T:C	rs67717905	T	C	T	Sox2_MA0143.3	-19	0	+	0	0	.
chr17	68579831	68579832	chr17:68579832:A:T	rs193135916	A	T	A	Sox2_MA0143.3	-18	0	+	0	0	.
chr17	68657198	68657199	chr17:68657199:T:C	rs16973176	T	C	T	Sox2_MA0143.3	-3	0	-	0	0	.
chr17	68689615	68689616	chr17:68689616:G:A	rs79618182	G	A	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr17	68778451	68778452	chr17:68778452:A:T	rs935138	A	T	A	Sox2_MA0143.3	14	0	-	0	0	.
chr17	68784253	68784254	chr17:68784254:T:C	rs755424	T	C	T	Sox2_MA0143.3	21	0	-	0	0	.
chr17	68808463	68808464	chr17:68808464:C:G	rs73357092	C	G	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr17	68813322	68813323	chr17:68813323:C:G	rs919644412	C	G	C	Sox2_MA0143.3	17	0	-	0	0	.
chr17	69009553	69009554	chr17:69009554:C:T	rs58844770	C	T	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr17	69084988	69084989	chr17:69084989:T:A	rs62082718	T	A	T	Sox2_MA0143.3	17	0	-	0	0	.
chr17	69085019	69085020	chr17:69085020:G:A	rs62082719	G	A	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr17	69090582	69090583	chr17:69090583:T:C	rs1860120	T	C	C	Sox2_MA0143.3	19	0	+	0	0	.
chr17	69250900	69250901	chr17:69250901:A:C	rs7208451	A	C	A	Sox2_MA0143.3	-5	0	+	0	0	.
chr17	69779541	69779542	chr17:69779542:G:A	rs2214636	G	A	A	Sox2_MA0143.3	-5	0	+	0	0	.
chr17	69779542	69779543	chr17:69779543:T:C	rs2214635	T	C	T	Sox2_MA0143.3	-4	0	+	0	0	.
chr17	69977270	69977271	chr17:69977271:A:C	rs16974737	A	C	A	Sox2_MA0143.3	-16	0	-	0	0	.
chr17	70185042	70185043	chr17:70185043:C:G	rs62081383	C	G	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr17	70322344	70322345	chr17:70322345:T:C	rs312742	T	C	C	Sox2_MA0143.3	15	0	+	0	0	.
chr17	70577736	70577737	chr17:70577737:A:C	rs12602288	A	C	A	Sox2_MA0143.3	19	0	+	0	0	.
chr17	70609821	70609822	chr17:70609822:T:G	rs78123369	T	G	T	Sox2_MA0143.3	-11	0	-	0	0	.
chr17	70622585	70622586	chr17:70622586:G:T	rs78643277	G	T	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr17	70739550	70739551	chr17:70739551:G:C	rs7220992	G	C	C	Sox2_MA0143.3	16	0	-	0	0	.
chr17	70792189	70792190	chr17:70792190:T:C	rs111928408	T	C	T	Sox2_MA0143.3	7	1	+	9.800647049772198	9.206767037375712	CCTTTGTT
chr17	71439184	71439185	chr17:71439185:C:G	rs148060794	C	G	C	Sox2_MA0143.3	27	0	-	0	0	.
chr17	71475631	71475632	chr17:71475632:T:A	rs12940634	T	A	T	Sox2_MA0143.3	-18	0	+	0	0	.
chr17	71519472	71519473	chr17:71519473:A:G	rs17226067	A	G	A	Sox2_MA0143.3	-5	0	-	0	0	.
chr17	72049416	72049417	chr17:72049417:C:T	rs62070089	C	T	c	Sox2_MA0143.3	-12	0	+	0	0	.
chr17	72054761	72054762	chr17:72054762:T:C	rs79084187	T	C	T	Sox2_MA0143.3	-5	0	+	0	0	.
chr17	72070149	72070150	chr17:72070150:T:C	rs8064641	T	C	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr17	72107099	72107100	chr17:72107100:T:A	rs17826532	T	A	T	Sox2_MA0143.3	24	0	+	0	0	.
chr17	72276402	72276403	chr17:72276403:G:A	rs60342627	G	A	G	Sox2_MA0143.3	8	0	+	0	0	.
chr17	72313201	72313202	chr17:72313202:G:A	rs12948738	G	A	G	Sox2_MA0143.3	27	0	+	0	0	.
chr17	72333713	72333714	chr17:72333714:A:G	rs7221478	A	G	G	Sox2_MA0143.3	4	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr17	72386552	72386553	chr17:72386553:T:C	rs4793439	T	C	C	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr17	72421629	72421630	chr17:72421630:C:A	rs78632779	C	A	C	Sox2_MA0143.3	11	0	+	0	0	.
chr17	72430525	72430526	chr17:72430526:G:A	rs741403	G	A	A	Sox2_MA0143.3	8	0	-	0	0	.
chr17	72503375	72503376	chr17:72503376:T:C	rs1177963	T	C	C	Sox2_MA0143.3	21	0	+	0	0	.
chr17	72551322	72551323	chr17:72551323:G:A	rs8079629	G	A	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr17	72561079	72561080	chr17:72561080:G:A	rs187612147	G	A	G	Sox2_MA0143.3	14	0	-	0	0	.
chr17	72617015	72617016	chr17:72617016:T:C	rs9889692	T	C	C	Sox2_MA0143.3	21	0	+	0	0	.
chr17	72623207	72623208	chr17:72623208:G:A	rs116956401	G	A	G	Sox2_MA0143.3	13	0	+	0	0	.
chr17	72649306	72649307	chr17:72649307:A:G	rs3924958	A	G	A	Sox2_MA0143.3	19	0	-	0	0	.
chr17	72715534	72715535	chr17:72715535:A:C	rs2567501	A	C	C	Sox2_MA0143.3	12	0	-	0	0	.
chr17	72715546	72715547	chr17:72715547:G:A	rs79349440	G	A	G	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr17	72716409	72716410	chr17:72716410:C:T	rs16977351	C	T	C	Sox2_MA0143.3	10	0	-	0	0	.
chr17	72759453	72759454	chr17:72759454:A:C	rs2713974	A	C	A	Sox2_MA0143.3	-14	0	-	0	0	.
chr17	72759692	72759693	chr17:72759693:G:A	rs962571	G	A	A	Sox2_MA0143.3	25	0	-	0	0	.
chr17	72786023	72786024	chr17:72786024:G:A	rs9907286	G	A	G	Sox2_MA0143.3	20	0	-	0	0	.
chr17	72822669	72822670	chr17:72822670:G:A	rs1367800	G	A	G	Sox2_MA0143.3	10	0	-	0	0	.
chr17	72851028	72851029	chr17:72851029:C:G	rs11653124	C	G	C	Sox2_MA0143.3	-12	0	-	0	0	.
chr17	72913315	72913316	chr17:72913316:G:A	rs3606	G	A	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr17	72977399	72977400	chr17:72977400:A:C	rs73349343	A	C	A	Sox2_MA0143.3	11	0	-	0	0	.
chr17	72977685	72977686	chr17:72977686:C:T	rs78403997	C	T	C	Sox2_MA0143.3	27	0	-	0	0	.
chr17	73048991	73048992	chr17:73048992:G:A	rs9914201	G	A	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr17	73085677	73085678	chr17:73085678:G:A	rs9944402	G	A	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr17	73119554	73119555	chr17:73119555:G:T	rs8076982	G	T	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr17	73122382	73122383	chr17:73122383:A:G	rs149687445	A	G	A	Sox2_MA0143.3	12	0	-	0	0	.
chr17	73208143	73208144	chr17:73208144:C:T	rs76058650	C	T	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr17	73250956	73250957	chr17:73250957:G:C	rs191238396	G	C	G	Sox2_MA0143.3	-5	0	+	0	0	.
chr17	73267857	73267858	chr17:73267858:C:T	rs12600484	C	T	C	Sox2_MA0143.3	20	0	+	0	0	.
chr17	73369934	73369935	chr17:73369935:A:T	rs112715409	A	T	A	Sox2_MA0143.3	-7	0	+	0	0	.
chr17	73375309	73375310	chr17:73375310:T:C	rs28718872	T	C	C	Sox2_MA0143.3	2	1	-	9.613475778572903	3.494828071296623	CCATTGTT
chr17	73397112	73397113	chr17:73397113:T:G	rs111432885	T	G	T	Sox2_MA0143.3	-16	0	-	0	0	.
chr17	73501589	73501590	chr17:73501590:A:G	rs2410774	A	G	A	Sox2_MA0143.3	20	0	-	0	0	.
chr17	73508455	73508456	chr17:73508456:A:G	rs9897755	A	G	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr17	73514352	73514353	chr17:73514353:C:T	rs34476406	C	T	C	Sox2_MA0143.3	0	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr17	73640442	73640443	chr17:73640443:G:T	rs4789236	G	T	T	Sox2_MA0143.3	20	0	-	0	0	.
chr17	73686276	73686277	chr17:73686277:G:A	rs323408	G	A	A	Sox2_MA0143.3	-15	0	-	0	0	.
chr17	73787326	73787327	chr17:73787327:C:T	rs139422632	C	T	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr17	73813515	73813516	chr17:73813516:G:A	rs7213934	G	A	G	Sox2_MA0143.3	11	0	-	0	0	.
chr17	73907916	73907917	chr17:73907917:T:C	rs60230959	T	C	T	Sox2_MA0143.3	2	1	-	8.676919043985553	2.5582713367092715	CCATTGTG
chr17	73932722	73932723	chr17:73932723:G:A	rs67098955	G	A	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr17	73948094	73948095	chr17:73948095:A:G	rs76712617	A	G	A	Sox2_MA0143.3	17	0	+	0	0	.
chr17	74070484	74070485	chr17:74070485:T:C	rs2125169	T	C	T	Sox2_MA0143.3	3	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr17	74071374	74071375	chr17:74071375:G:T	rs116469568	G	T	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr17	74115579	74115580	chr17:74115580:A:G	rs34789959	A	G	A	Sox2_MA0143.3	3	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr17	74115600	74115601	chr17:74115601:A:G	rs35756186	A	G	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr17	74131153	74131154	chr17:74131154:G:A	rs72844080	G	A	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr17	74149928	74149929	chr17:74149929:T:C	rs3935106	T	C	C	Sox2_MA0143.3	17	0	+	0	0	.
chr17	74168162	74168163	chr17:74168163:A:G	rs9896396	A	G	G	Sox2_MA0143.3	26	0	-	0	0	.
chr17	74198937	74198938	chr17:74198938:G:C	rs72848244	G	C	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr17	74204096	74204097	chr17:74204097:C:G	rs142951724	C	G	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr17	74204099	74204100	chr17:74204100:C:G	rs146153501	C	G	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr17	74250658	74250659	chr17:74250659:A:G	rs7225791	A	G	G	Sox2_MA0143.3	17	0	+	0	0	.
chr17	74250667	74250668	chr17:74250668:C:T	rs7225236	C	T	c	Sox2_MA0143.3	26	0	+	0	0	.
chr17	74253089	74253090	chr17:74253090:C:A	rs9899862	C	A	C	Sox2_MA0143.3	21	0	+	0	0	.
chr17	74309548	74309549	chr17:74309549:T:C	rs2290956	T	C	G	Sox2_MA0143.3	21	0	-	0	0	.
chr17	74330837	74330838	chr17:74330838:G:A	rs1551856	G	A	A	Sox2_MA0143.3	20	0	+	0	0	.
chr17	74346909	74346910	chr17:74346910:G:A	rs9783802	G	A	G	Sox2_MA0143.3	13	0	+	0	0	.
chr17	74356317	74356318	chr17:74356318:G:A	rs77811367	G	A	G	Sox2_MA0143.3	15	0	-	0	0	.
chr17	74444241	74444242	chr17:74444242:G:A	rs2706530	G	A	A	Sox2_MA0143.3	19	0	-	0	0	.
chr17	74457571	74457572	chr17:74457572:G:A	rs148000518	G	A	G	Sox2_MA0143.3	13	0	+	0	0	.
chr17	74481245	74481246	chr17:74481246:A:G	rs1879967	A	G	G	Sox2_MA0143.3	2	1	+	9.613475778572903	3.494828071296623	CCATTGTT
chr17	74488284	74488285	chr17:74488285:C:G	rs4589592	C	G	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr17	74489608	74489609	chr17:74489609:T:C	rs4789064	T	C	T	Sox2_MA0143.3	3	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr17	74512516	74512517	chr17:74512517:C:T	rs905705	C	T	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr17	74541039	74541040	chr17:74541040:C:A	rs1532800	C	A	C	Sox2_MA0143.3	23	0	-	0	0	.
chr17	74577428	74577429	chr17:74577429:G:A	rs1719472	G	A	A	Sox2_MA0143.3	-9	0	+	0	0	.
chr17	74603278	74603279	chr17:74603279:G:A	rs513643	G	A	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr17	74654757	74654758	chr17:74654758:G:A	rs7210201	G	A	G	Sox2_MA0143.3	-12	0	+	0	0	.
chr17	74704803	74704804	chr17:74704804:A:G	rs35489971	A	G	G	Sox2_MA0143.3	6	1	-	9.019595766176417	2.110840986861197	CCATTGTC
chr17	74744112	74744113	chr17:74744113:G:C	rs9912220	G	C	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr17	74745723	74745724	chr17:74745724:G:A	rs149201208	G	A	G	Sox2_MA0143.3	26	0	-	0	0	.
chr17	74788792	74788793	chr17:74788793:G:A	rs2016126	G	A	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr17	74872667	74872668	chr17:74872668:C:T	rs1007209516	C	T	C	Sox2_MA0143.3	14	0	+	0	0	.
chr17	74987792	74987793	chr17:74987793:A:C	rs7222918	A	C	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr17	75013245	75013246	chr17:75013246:A:G	rs553421334	A	G	A	Sox2_MA0143.3	2	1	+	9.019595766176417	2.900948058900136	CCATTGTC
chr17	75033055	75033056	chr17:75033056:C:T	rs116075492	C	T	C	Sox2_MA0143.3	-5	0	-	0	0	.
chr17	75098888	75098889	chr17:75098889:G:A	rs9905873	G	A	G	Sox2_MA0143.3	27	0	+	0	0	.
chr17	75131943	75131944	chr17:75131944:A:G	rs774104495	A	G	A	Sox2_MA0143.3	-2	0	+	0	0	.
chr17	75132054	75132055	chr17:75132055:A:G	rs4789143	A	G	A	Sox2_MA0143.3	-11	0	-	0	0	.
chr17	75153431	75153432	chr17:75153432:G:A	rs747029109	G	A	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr17	75153665	75153666	chr17:75153666:G:A	chr17:75153666:G:A	G	A	G	Sox2_MA0143.3	18	0	+	0	0	.
chr17	75154205	75154206	chr17:75154206:G:C	rs555822087	G	C	g	Sox2_MA0143.3	-15	0	-	0	0	.
chr17	75181835	75181836	chr17:75181836:C:G	rs550131784	C	G	c	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr17	75256644	75256645	chr17:75256645:C:T	rs34996752	C	T	c	Sox2_MA0143.3	-5	0	+	0	0	.
chr17	75278099	75278100	chr17:75278100:T:C	rs2306217	T	C	C	Sox2_MA0143.3	21	0	+	0	0	.
chr17	75393364	75393365	chr17:75393365:A:G	rs4788890	A	G	A	Sox2_MA0143.3	-20	0	-	0	0	.
chr17	75581455	75581456	chr17:75581456:C:T	rs73364292	C	T	C	Sox2_MA0143.3	25	0	+	0	0	.
chr17	75587850	75587851	chr17:75587851:T:C	rs707711	T	C	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr17	75655173	75655174	chr17:75655174:C:T	rs820212	C	T	C	Sox2_MA0143.3	12	0	+	0	0	.
chr17	75679946	75679947	chr17:75679947:G:A	rs754297330	G	A	G	Sox2_MA0143.3	20	0	+	0	0	.
chr17	75768933	75768934	chr17:75768934:A:G	rs72860362	A	G	A	Sox2_MA0143.3	-19	0	-	0	0	.
chr17	75778789	75778790	chr17:75778790:G:A	rs199824594	G	A	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr17	75779011	75779012	chr17:75779012:C:T	rs375253689	C	T	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr17	75830038	75830039	chr17:75830039:C:T	rs35628234	C	T	C	Sox2_MA0143.3	14	0	-	0	0	.
chr17	75869464	75869465	chr17:75869465:G:A	rs117566988	G	A	G	Sox2_MA0143.3	-2	0	+	0	0	.
chr17	75869989	75869990	chr17:75869990:C:T	rs72860389	C	T	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr17	75906148	75906149	chr17:75906149:A:G	rs180757365	A	G	A	Sox2_MA0143.3	-17	0	-	0	0	.
chr17	75906345	75906346	chr17:75906346:C:T	rs78360511	C	T	C	Sox2_MA0143.3	25	0	+	0	0	.
chr17	76087947	76087948	chr17:76087948:C:T	rs2243486	C	T	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr17	76088260	76088261	chr17:76088261:A:G	rs58653485	A	G	A	Sox2_MA0143.3	-18	0	-	0	0	.
chr17	76121023	76121024	chr17:76121024:T:G	rs141733814	T	G	T	Sox2_MA0143.3	27	0	-	0	0	.
chr17	76160124	76160125	chr17:76160125:A:T	rs571693281	A	T	A	Sox2_MA0143.3	-11	0	+	0	0	.
chr17	76199069	76199070	chr17:76199070:C:T	rs8067947	C	T	T	Sox2_MA0143.3	-9	0	-	0	0	.
chr17	76208275	76208276	chr17:76208276:A:G	rs12453112	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr17	76240884	76240885	chr17:76240885:G:A	rs112660155	G	A	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr17	76253312	76253313	chr17:76253313:G:C	rs4789261	G	C	G	Sox2_MA0143.3	22	0	-	0	0	.
chr17	76257063	76257064	chr17:76257064:G:A	rs9903283	G	A	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr17	76315169	76315170	chr17:76315170:T:C	rs73996321	T	C	T	Sox2_MA0143.3	13	0	-	0	0	.
chr17	76382386	76382387	chr17:76382387:G:T	rs146487180	G	T	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr17	76385928	76385929	chr17:76385929:C:T	rs191370072	C	T	C	Sox2_MA0143.3	10	0	+	0	0	.
chr17	76427640	76427641	chr17:76427641:C:T	rs190790579	C	T	C	Sox2_MA0143.3	25	0	+	0	0	.
chr17	76481537	76481538	chr17:76481538:C:T	rs12943385	C	T	C	Sox2_MA0143.3	17	0	+	0	0	.
chr17	76492435	76492436	chr17:76492436:A:G	rs77254335	A	G	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr17	76516250	76516251	chr17:76516251:G:T	rs8073452	G	T	G	Sox2_MA0143.3	17	0	+	0	0	.
chr17	76516253	76516254	chr17:76516254:T:G	rs56896612	T	G	-	Sox2_MA0143.3	20	0	+	0	0	.
chr17	76546545	76546546	chr17:76546546:A:C	rs12944601	A	C	C	Sox2_MA0143.3	17	0	-	0	0	.
chr17	76546562	76546563	chr17:76546563:G:C	rs114437911	G	C	G	Sox2_MA0143.3	0	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr17	76570049	76570050	chr17:76570050:C:T	rs78084209	C	T	C	Sox2_MA0143.3	0	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr17	76570052	76570053	chr17:76570053:T:C	rs12601644	T	C	T	Sox2_MA0143.3	3	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr17	76579498	76579499	chr17:76579499:G:A	rs117058309	G	A	G	Sox2_MA0143.3	10	0	+	0	0	.
chr17	76585528	76585529	chr17:76585529:G:T	rs113818908	G	T	G	Sox2_MA0143.3	1	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr17	76585532	76585533	chr17:76585533:C:G	rs145005410	C	G	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr17	76637166	76637167	chr17:76637167:A:G	rs62085072	A	G	A	Sox2_MA0143.3	-3	0	+	0	0	.
chr17	76643728	76643729	chr17:76643729:A:G	rs28372699	A	G	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr17	76656468	76656469	chr17:76656469:A:G	rs4789340	A	G	A	Sox2_MA0143.3	11	0	+	0	0	.
chr17	76671724	76671725	chr17:76671725:A:C	rs9910053	A	C	C	Sox2_MA0143.3	22	0	+	0	0	.
chr17	76688515	76688516	chr17:76688516:C:T	rs4788942	C	T	T	Sox2_MA0143.3	9	0	-	0	0	.
chr17	76706421	76706422	chr17:76706422:A:G	rs72490463	A	G	G	Sox2_MA0143.3	9	0	-	0	0	.
chr17	76736742	76736743	chr17:76736743:C:T	rs576861200	C	T	C	Sox2_MA0143.3	14	0	+	0	0	.
chr17	76736753	76736754	chr17:76736754:C:T	rs763059673	C	T	C	Sox2_MA0143.3	25	0	+	0	0	.
chr17	76995528	76995529	chr17:76995529:G:A	rs4789396	G	A	g	Sox2_MA0143.3	-13	0	+	0	0	.
chr17	76995980	76995981	chr17:76995981:G:A	rs186394753	G	A	g	Sox2_MA0143.3	-8	0	+	0	0	.
chr17	76995989	76995990	chr17:76995990:C:T	rs9916056	C	T	c	Sox2_MA0143.3	1	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr17	77074716	77074717	chr17:77074717:T:G	rs894573	T	G	T	Sox2_MA0143.3	2	1	+	3.5547341015215945	-2.751084876953981	CCTTTGTA
chr17	77147229	77147230	chr17:77147230:G:A	rs117277075	G	A	G	Sox2_MA0143.3	26	0	+	0	0	.
chr17	77228301	77228302	chr17:77228302:C:T	rs11869401	C	T	C	Sox2_MA0143.3	24	0	-	0	0	.
chr17	77287973	77287974	chr17:77287974:G:A	rs138270732	G	A	G	Sox2_MA0143.3	-14	0	+	0	0	.
chr17	77295610	77295611	chr17:77295611:C:T	rs72880520	C	T	C	Sox2_MA0143.3	7	1	-	8.864090315184848	3.5547341015215945	CCTTTGTG
chr17	77352088	77352089	chr17:77352089:A:G	rs11650316	A	G	A	Sox2_MA0143.3	-8	0	-	0	0	.
chr17	77353104	77353105	chr17:77353105:G:A	rs58965067	G	A	G	Sox2_MA0143.3	23	0	-	0	0	.
chr17	77355151	77355152	chr17:77355152:G:A	rs28633701	G	A	G	Sox2_MA0143.3	5	1	+	8.676919043985553	1.7681642646703324	CCATTGTG
chr17	77375613	77375614	chr17:77375614:G:C	rs112387373	G	C	G	Sox2_MA0143.3	0	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr17	77391921	77391922	chr17:77391922:G:A	rs417734	G	A	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr17	77404986	77404987	chr17:77404987:C:T	rs550440665	C	T	C	Sox2_MA0143.3	11	0	+	0	0	.
chr17	77409777	77409778	chr17:77409778:C:T	rs1403828261	C	T	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr17	77424827	77424828	chr17:77424828:T:G	chr17:77424828:T:G	T	G	T	Sox2_MA0143.3	26	0	+	0	0	.
chr17	77496342	77496343	chr17:77496343:G:A	rs114131750	G	A	G	Sox2_MA0143.3	23	0	-	0	0	.
chr17	77497946	77497947	chr17:77497947:G:T	rs563849186	G	T	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr17	77535077	77535078	chr17:77535078:T:C	rs12600934	T	C	T	Sox2_MA0143.3	10	0	-	0	0	.
chr17	77546925	77546926	chr17:77546926:A:G	rs77237969	A	G	G	Sox2_MA0143.3	23	0	-	0	0	.
chr17	77546934	77546935	chr17:77546935:G:C	rs143678549	G	C	G	Sox2_MA0143.3	14	0	-	0	0	.
chr17	77558217	77558218	chr17:77558218:A:C	rs2411123	A	C	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr17	77606899	77606900	chr17:77606900:C:T	rs113211660	C	T	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr17	77607020	77607021	chr17:77607021:G:A	rs4789470	G	A	G	Sox2_MA0143.3	-12	0	+	0	0	.
chr17	77607047	77607048	chr17:77607048:C:T	rs4789471	C	T	C	Sox2_MA0143.3	15	0	+	0	0	.
chr17	77610858	77610859	chr17:77610859:G:A	rs189127154	G	A	G	Sox2_MA0143.3	14	0	+	0	0	.
chr17	77615533	77615534	chr17:77615534:C:T	rs12949359	C	T	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr17	77615852	77615853	chr17:77615853:A:G	rs16970364	A	G	A	Sox2_MA0143.3	-11	0	+	0	0	.
chr17	77696469	77696470	chr17:77696470:A:C	rs561252936	A	C	A	Sox2_MA0143.3	16	0	-	0	0	.
chr17	77755147	77755148	chr17:77755148:C:T	rs875188	C	T	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr17	77783113	77783114	chr17:77783114:C:T	rs11654468	C	T	C	Sox2_MA0143.3	25	0	-	0	0	.
chr17	77783120	77783121	chr17:77783121:C:G	rs56011944	C	G	C	Sox2_MA0143.3	18	0	-	0	0	.
chr17	77822840	77822841	chr17:77822841:A:G	rs77358175	A	G	G	Sox2_MA0143.3	22	0	-	0	0	.
chr17	77822857	77822858	chr17:77822858:C:G	rs5023591	C	G	G	Sox2_MA0143.3	5	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr17	77848775	77848776	chr17:77848776:C:A	rs12602654	C	A	C	Sox2_MA0143.3	25	0	+	0	0	.
chr17	77942346	77942347	chr17:77942347:T:A	rs186708463	T	A	T	Sox2_MA0143.3	-6	0	-	0	0	.
chr17	77942585	77942586	chr17:77942586:C:T	rs137940059	C	T	C	Sox2_MA0143.3	12	0	-	0	0	.
chr17	77942614	77942615	chr17:77942615:C:T	rs78859263	C	T	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr17	77959323	77959324	chr17:77959324:C:T	rs530733482	C	T	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr17	78010944	78010945	chr17:78010945:G:A	rs551919317	G	A	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr17	78021311	78021312	chr17:78021312:G:A	rs144501789	G	A	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr17	78088002	78088003	chr17:78088003:A:G	rs77923355	A	G	A	Sox2_MA0143.3	13	0	-	0	0	.
chr17	78107602	78107603	chr17:78107603:G:C	rs1048591	G	C	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr17	78111311	78111312	chr17:78111312:A:G	rs16970842	A	G	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr17	78133141	78133142	chr17:78133142:G:A	rs190820706	G	A	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr17	78206530	78206531	chr17:78206531:C:T	rs12452036	C	T	T	Sox2_MA0143.3	21	0	-	0	0	.
chr17	78240872	78240873	chr17:78240873:A:C	rs7211218	A	C	C	Sox2_MA0143.3	22	0	+	0	0	.
chr17	78290590	78290591	chr17:78290591:G:A	rs12603274	G	A	G	Sox2_MA0143.3	17	0	-	0	0	.
chr17	78300848	78300849	chr17:78300849:C:T	rs55687609	C	T	C	Sox2_MA0143.3	14	0	+	0	0	.
chr17	78307886	78307887	chr17:78307887:C:T	rs34337761	C	T	C	Sox2_MA0143.3	17	0	-	0	0	.
chr17	78322462	78322463	chr17:78322463:G:A	rs6501196	G	A	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr17	78326472	78326473	chr17:78326473:C:T	rs11651398	C	T	C	Sox2_MA0143.3	7	1	+	9.019595766176417	9.613475778572903	CCATTGTC
chr17	78329598	78329599	chr17:78329599:C:T	rs986687550	C	T	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr17	78329611	78329612	chr17:78329612:T:C	rs78761165	T	C	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr17	78359893	78359894	chr17:78359894:G:T	rs192803725	G	T	G	Sox2_MA0143.3	-16	0	-	0	0	.
chr17	78364456	78364457	chr17:78364457:A:G	rs4969170	A	G	A	Sox2_MA0143.3	21	0	+	0	0	.
chr17	78365093	78365094	chr17:78365094:G:C	rs75599905	G	C	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr17	78422292	78422293	chr17:78422293:T:C	rs572427833	T	C	T	Sox2_MA0143.3	-7	0	-	0	0	.
chr17	78428860	78428861	chr17:78428861:T:C	rs691113	T	C	T	Sox2_MA0143.3	18	0	+	0	0	.
chr17	78538666	78538667	chr17:78538667:C:A	rs8071221	C	A	A	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr17	78600218	78600219	chr17:78600219:T:A	rs62073845	T	A	T	Sox2_MA0143.3	-4	0	-	0	0	.
chr17	78664967	78664968	chr17:78664968:G:A	rs35498712	G	A	G	Sox2_MA0143.3	21	0	+	0	0	.
chr17	78666378	78666379	chr17:78666379:C:T	rs114004029	C	T	C	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr17	78698017	78698018	chr17:78698018:C:T	rs113094786	C	T	c	Sox2_MA0143.3	-3	0	+	0	0	.
chr17	78717216	78717217	chr17:78717217:A:G	rs12950520	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr17	78717227	78717228	chr17:78717228:C:T	rs1477802558	C	T	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr17	78717233	78717234	chr17:78717234:G:T	rs12951261	G	T	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr17	78717335	78717336	chr17:78717336:G:A	rs552631870	G	A	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr17	78717553	78717554	chr17:78717554:T:C	chr17:78717554:T:C	T	C	T	Sox2_MA0143.3	21	0	-	0	0	.
chr17	78803752	78803753	chr17:78803753:C:A	rs3744797	C	A	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr17	78889034	78889035	chr17:78889035:T:C	rs2003241	T	C	C	Sox2_MA0143.3	-12	0	-	0	0	.
chr17	78892914	78892915	chr17:78892915:G:T	rs11077401	G	T	G	Sox2_MA0143.3	14	0	-	0	0	.
chr17	78930532	78930533	chr17:78930533:T:C	rs62074411	T	C	C	Sox2_MA0143.3	22	0	-	0	0	.
chr17	78930572	78930573	chr17:78930573:C:T	rs56022304	C	T	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr17	78930574	78930575	chr17:78930575:G:A	rs9916052	G	A	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr17	78974907	78974908	chr17:78974908:G:A	rs151313350	G	A	G	Sox2_MA0143.3	17	0	+	0	0	.
chr17	79053238	79053239	chr17:79053239:C:A	rs75242795	C	A	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr17	79074593	79074594	chr17:79074594:C:A	rs56200816	C	A	A	Sox2_MA0143.3	5	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr17	79082755	79082756	chr17:79082756:A:G	rs60799306	A	G	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr17	79149349	79149350	chr17:79149350:G:T	rs12451762	G	T	G	Sox2_MA0143.3	18	0	-	0	0	.
chr17	79436656	79436657	chr17:79436657:T:C	rs11871318	T	C	t	Sox2_MA0143.3	21	0	-	0	0	.
chr17	79442939	79442940	chr17:79442940:C:G	rs117307761	C	G	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr17	79464377	79464378	chr17:79464378:G:A	rs144692344	G	A	G	Sox2_MA0143.3	23	0	+	0	0	.
chr17	79573275	79573276	chr17:79573276:A:G	rs36192442	A	G	a	Sox2_MA0143.3	13	0	-	0	0	.
chr17	79575322	79575323	chr17:79575323:G:C	rs36150004	G	C	G	Sox2_MA0143.3	24	0	-	0	0	.
chr17	79596566	79596567	chr17:79596567:G:T	rs9906644	G	T	G	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr17	79684671	79684672	chr17:79684672:G:A	rs4591175	G	A	a	Sox2_MA0143.3	10	0	+	0	0	.
chr17	79778595	79778596	chr17:79778596:G:A	rs111795035	G	A	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr17	79825544	79825545	chr17:79825545:A:G	rs35986327	A	G	A	Sox2_MA0143.3	9	0	-	0	0	.
chr17	79905999	79906000	chr17:79906000:A:G	rs80080171	A	G	G	Sox2_MA0143.3	21	0	-	0	0	.
chr17	79906039	79906040	chr17:79906040:G:A	rs75459259	G	A	A	Sox2_MA0143.3	-19	0	-	0	0	.
chr17	80036577	80036578	chr17:80036578:C:A	chr17:80036578:C:A	C	A	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr17	80036910	80036911	chr17:80036911:C:T	rs3752040	C	T	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr17	80036911	80036912	chr17:80036912:C:T	rs187049659	C	T	C	Sox2_MA0143.3	0	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr17	80061400	80061401	chr17:80061401:T:G	rs62074551	T	G	t	Sox2_MA0143.3	3	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr17	80102560	80102561	chr17:80102561:A:C	rs55751636	A	C	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr17	80126390	80126391	chr17:80126391:G:A	rs111915806	G	A	g	Sox2_MA0143.3	-11	0	+	0	0	.
chr17	80128717	80128718	chr17:80128718:C:T	rs12451471	C	T	c	Sox2_MA0143.3	7	1	+	9.206767037375712	9.800647049772198	CCTTTGTC
chr17	80149828	80149829	chr17:80149829:G:A	rs117099101	G	A	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr17	80164396	80164397	chr17:80164397:G:A	rs8065486	G	A	A	Sox2_MA0143.3	25	0	-	0	0	.
chr17	80180560	80180561	chr17:80180561:T:C	rs6565642	T	C	T	Sox2_MA0143.3	12	0	-	0	0	.
chr17	80278036	80278037	chr17:80278037:A:G	rs373638772	A	G	A	Sox2_MA0143.3	-10	0	+	0	0	.
chr17	80278054	80278055	chr17:80278055:C:G	rs9896523	C	G	G	Sox2_MA0143.3	8	0	+	0	0	.
chr17	80308225	80308226	chr17:80308226:G:A	rs61327219	G	A	G	Sox2_MA0143.3	11	0	+	0	0	.
chr17	80308233	80308234	chr17:80308234:C:T	rs61118700	C	T	T	Sox2_MA0143.3	19	0	+	0	0	.
chr17	80340559	80340560	chr17:80340560:C:T	rs67262798	C	T	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr17	80349019	80349020	chr17:80349020:C:G	rs7224493	C	G	G	Sox2_MA0143.3	9	0	-	0	0	.
chr17	80413706	80413707	chr17:80413707:C:T	rs4310923	C	T	C	Sox2_MA0143.3	19	0	+	0	0	.
chr17	80435903	80435904	chr17:80435904:T:C	rs7212185	T	C	C	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr17	80487218	80487219	chr17:80487219:A:G	rs118134255	A	G	A	Sox2_MA0143.3	16	0	+	0	0	.
chr17	80527261	80527262	chr17:80527262:C:A	rs9891376	C	A	C	Sox2_MA0143.3	27	0	-	0	0	.
chr17	80527300	80527301	chr17:80527301:T:C	rs6565694	T	C	T	Sox2_MA0143.3	-12	0	-	0	0	.
chr17	80565793	80565794	chr17:80565794:T:A	rs7210150	T	A	A	Sox2_MA0143.3	-12	0	-	0	0	.
chr17	80674326	80674327	chr17:80674327:A:G	rs11150738	A	G	A	Sox2_MA0143.3	14	0	+	0	0	.
chr17	80686425	80686426	chr17:80686426:G:A	rs7216337	G	A	a	Sox2_MA0143.3	-4	0	+	0	0	.
chr17	80703104	80703105	chr17:80703105:T:C	rs4062178	T	C	t	Sox2_MA0143.3	-17	0	+	0	0	.
chr17	80741766	80741767	chr17:80741767:C:T	rs4889786	C	T	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr17	80758360	80758361	chr17:80758361:T:G	rs149912653	T	G	T	Sox2_MA0143.3	-17	0	+	0	0	.
chr17	80763549	80763550	chr17:80763550:T:C	rs9913009	T	C	T	Sox2_MA0143.3	26	0	-	0	0	.
chr17	80773984	80773985	chr17:80773985:G:T	rs58119287	G	T	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr17	80802200	80802201	chr17:80802201:A:C	rs60087410	A	C	C	Sox2_MA0143.3	19	0	-	0	0	.
chr17	80808539	80808540	chr17:80808540:G:A	rs734338	G	A	A	Sox2_MA0143.3	27	0	+	0	0	.
chr17	80815703	80815704	chr17:80815704:T:G	rs894634862	T	G	T	Sox2_MA0143.3	-5	0	-	0	0	.
chr17	80863045	80863046	chr17:80863046:A:G	rs2063785	A	G	A	Sox2_MA0143.3	2	1	+	8.676919043985553	2.5582713367092715	CCATTGTG
chr17	80898844	80898845	chr17:80898845:T:C	rs4969224	T	C	C	Sox2_MA0143.3	13	0	+	0	0	.
chr17	80920713	80920714	chr17:80920714:G:A	rs9897968	G	A	G	Sox2_MA0143.3	12	0	+	0	0	.
chr17	80942475	80942476	chr17:80942476:C:T	rs28672712	C	T	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr17	80942855	80942856	chr17:80942856:G:A	rs1046292059	G	A	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr17	81011118	81011119	chr17:81011119:G:A	rs74004831	G	A	G	Sox2_MA0143.3	16	0	-	0	0	.
chr17	81066009	81066010	chr17:81066010:C:T	rs76714681	C	T	C	Sox2_MA0143.3	16	0	+	0	0	.
chr17	81076672	81076673	chr17:81076673:A:G	rs4969373	A	G	A	Sox2_MA0143.3	27	0	-	0	0	.
chr17	81102975	81102976	chr17:81102976:G:A	rs4969386	G	A	G	Sox2_MA0143.3	24	0	+	0	0	.
chr17	81117302	81117303	chr17:81117303:G:T	rs8071392	G	T	T	Sox2_MA0143.3	-9	0	-	0	0	.
chr17	81150998	81150999	chr17:81150999:T:C	rs12937783	T	C	T	Sox2_MA0143.3	23	0	+	0	0	.
chr17	81267720	81267721	chr17:81267721:A:G	rs7223939	A	G	A	Sox2_MA0143.3	-2	0	-	0	0	.
chr17	81315354	81315355	chr17:81315355:G:A	rs56148530	G	A	G	Sox2_MA0143.3	-16	0	-	0	0	.
chr17	81346283	81346284	chr17:81346284:G:C	rs558760328	G	C	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr17	81346301	81346302	chr17:81346302:G:A	rs570699187	G	A	G	Sox2_MA0143.3	11	0	+	0	0	.
chr17	81346306	81346307	chr17:81346307:C:G	rs538191961	C	G	C	Sox2_MA0143.3	16	0	+	0	0	.
chr17	81374035	81374036	chr17:81374036:C:T	rs55932926	C	T	C	Sox2_MA0143.3	18	0	-	0	0	.
chr17	81397546	81397547	chr17:81397547:C:T	rs782071320	C	T	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr17	81402851	81402852	chr17:81402852:G:C	rs180828985	G	C	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr17	81459389	81459390	chr17:81459390:A:G	rs4969272	A	G	A	Sox2_MA0143.3	-2	0	-	0	0	.
chr17	81459405	81459406	chr17:81459406:C:T	rs1334436722	C	T	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr17	81509454	81509455	chr17:81509455:A:G	rs189171306	A	G	A	Sox2_MA0143.3	4	1	-	3.5547341015215945	-3.3540206777936254	CCTTTGTA
chr17	81513659	81513660	chr17:81513660:T:C	rs11657440	T	C	C	Sox2_MA0143.3	2	1	-	9.019595766176417	2.900948058900136	CCATTGTC
chr17	81584519	81584520	chr17:81584520:T:C	rs79459378	T	C	T	Sox2_MA0143.3	17	0	-	0	0	.
chr17	81720656	81720657	chr17:81720657:G:A	rs62077221	G	A	A	Sox2_MA0143.3	-13	0	+	0	0	.
chr17	81720658	81720659	chr17:81720659:T:A	rs114512848	T	A	T	Sox2_MA0143.3	-11	0	+	0	0	.
chr17	82095589	82095590	chr17:82095590:T:C	rs62078745	T	C	T	Sox2_MA0143.3	18	0	-	0	0	.
chr17	82097799	82097800	chr17:82097800:G:A	chr17:82097800:G:A	G	A	G	Sox2_MA0143.3	5	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr17	82099222	82099223	chr17:82099223:C:T	rs7209621	C	T	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr17	82105649	82105650	chr17:82105650:G:A	rs8065606	G	A	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr17	82163398	82163399	chr17:82163399:A:G	rs34448080	A	G	G	Sox2_MA0143.3	4	1	-	9.800647049772198	2.8918922704569785	CCTTTGTT
chr17	82221270	82221271	chr17:82221271:A:C	rs12601558	A	C	A	Sox2_MA0143.3	7	1	-	9.800647049772198	8.864090315184848	CCTTTGTT
chr17	82228170	82228171	chr17:82228171:C:G	rs75888222	C	G	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr17	82272480	82272481	chr17:82272481:G:A	rs117777876	G	A	G	Sox2_MA0143.3	23	0	+	0	0	.
chr17	82272834	82272835	chr17:82272835:T:C	rs746208526	T	C	T	Sox2_MA0143.3	22	0	+	0	0	.
chr17	82277186	82277187	chr17:82277187:C:T	rs113441289	C	T	C	Sox2_MA0143.3	-20	0	-	0	0	.
chr17	82288604	82288605	chr17:82288605:T:C	rs59015389	T	C	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr17	82345050	82345051	chr17:82345051:G:A	rs4261600	G	A	A	Sox2_MA0143.3	-14	0	-	0	0	.
chr17	82380186	82380187	chr17:82380187:G:A	rs112998556	G	A	G	Sox2_MA0143.3	19	0	+	0	0	.
chr17	82458694	82458695	chr17:82458695:C:A	rs1171988945	C	A	C	Sox2_MA0143.3	23	0	-	0	0	.
chr17	82458730	82458731	chr17:82458731:G:A	rs545519571	G	A	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr17	82493334	82493335	chr17:82493335:A:G	rs376581351	A	G	A	Sox2_MA0143.3	16	0	+	0	0	.
chr17	82498323	82498324	chr17:82498324:A:C	rs74344757	A	C	N	Sox2_MA0143.3	-8	0	+	0	0	.
chr17	82498342	82498343	chr17:82498343:G:T	rs78882069	G	T	N	Sox2_MA0143.3	11	0	+	0	0	.
chr17	82521130	82521131	chr17:82521131:G:C	rs190054380	G	C	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr17	82522105	82522106	chr17:82522106:G:A	rs2171211	G	A	G	Sox2_MA0143.3	-16	0	-	0	0	.
chr17	82533668	82533669	chr17:82533669:A:G	rs28794323	A	G	G	Sox2_MA0143.3	4	1	-	8.676919043985553	1.7681642646703322	CCATTGTG
chr17	82587279	82587280	chr17:82587280:A:G	rs6502124	A	G	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr17	82777473	82777474	chr17:82777474:C:G	rs11869106	C	G	C	Sox2_MA0143.3	10	0	-	0	0	.
chr17	82833929	82833930	chr17:82833930:A:G	rs113051447	A	G	A	Sox2_MA0143.3	15	0	-	0	0	.
chr17	82838564	82838565	chr17:82838565:A:G	rs932208174	A	G	A	Sox2_MA0143.3	-16	0	+	0	0	.
chr17	82846408	82846409	chr17:82846409:G:A	rs12945348	G	A	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr17	82846437	82846438	chr17:82846438:C:T	rs9912486	C	T	C	Sox2_MA0143.3	10	0	+	0	0	.
chr17	82848125	82848126	chr17:82848126:T:C	rs111938175	T	C	T	Sox2_MA0143.3	-18	0	+	0	0	.
chr17	82875457	82875458	chr17:82875458:T:C	rs6502010	T	C	C	Sox2_MA0143.3	8	0	+	0	0	.
chr17	82883112	82883113	chr17:82883113:C:T	rs9747334	C	T	C	Sox2_MA0143.3	11	0	+	0	0	.
chr17	82957839	82957840	chr17:82957840:A:C	rs67082360	A	C	A	Sox2_MA0143.3	12	0	+	0	0	.
chr17	82967328	82967329	chr17:82967329:A:C	rs9909026	A	C	a	Sox2_MA0143.3	25	0	-	0	0	.
chr17	82977130	82977131	chr17:82977131:G:C	rs62077887	G	C	G	Sox2_MA0143.3	0	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr17	83001121	83001122	chr17:83001122:T:C	rs12601298	T	C	T	Sox2_MA0143.3	13	0	-	0	0	.
chr17	83007501	83007502	chr17:83007502:A:T	rs751409	A	T	A	Sox2_MA0143.3	23	0	+	0	0	.
chr17	83037917	83037918	chr17:83037918:T:C	rs62073384	T	C	.	Sox2_MA0143.3	-2	0	+	0	0	.
chr17	83068882	83068883	chr17:83068883:A:G	rs1477217633	A	G	A	Sox2_MA0143.3	6	1	-	9.019595766176417	2.110840986861197	CCATTGTC
chr17	83099102	83099103	chr17:83099103:G:T	rs141398133	G	T	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr17	83145068	83145069	chr17:83145069:C:T	rs527410181	C	T	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr17	83145095	83145096	chr17:83145096:G:A	rs147505280	G	A	g	Sox2_MA0143.3	24	0	+	0	0	.
chr17	83148934	83148935	chr17:83148935:C:T	rs1451486785	C	T	C	Sox2_MA0143.3	27	0	+	0	0	.
chr17	83150293	83150294	chr17:83150294:C:G	rs9747138	C	G	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr17	83150294	83150295	chr17:83150295:C:T	rs9747139	C	T	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr17	83156224	83156225	chr17:83156225:T:G	rs9675054	T	G	A	Sox2_MA0143.3	2	1	-	9.019595766176417	2.900948058900136	CCATTGTC
chr17	83182605	83182606	chr17:83182606:T:C	rs377341289	T	C	T	Sox2_MA0143.3	-3	0	+	0	0	.
chr18	94422	94423	chr18:94423:G:T	rs554231397	G	T	.	Sox2_MA0143.3	-13	0	+	0	0	.
chr18	105652	105653	chr18:105653:A:G	chr18:105653:A:G	A	G	.	Sox2_MA0143.3	-20	0	+	0	0	.
chr18	109303	109304	chr18:109304:C:G	rs137913739	C	G	.	Sox2_MA0143.3	12	0	-	0	0	.
chr18	334741	334742	chr18:334742:C:T	rs2305027	C	T	C	Sox2_MA0143.3	1	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr18	334757	334758	chr18:334758:T:C	rs2305026	T	C	C	Sox2_MA0143.3	17	0	+	0	0	.
chr18	348264	348265	chr18:348265:T:C	rs8085115	T	C	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr18	362522	362523	chr18:362523:T:C	rs117504199	T	C	T	Sox2_MA0143.3	3	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr18	372040	372041	chr18:372041:C:T	rs12967313	C	T	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr18	377745	377746	chr18:377746:T:G	rs4798111	T	G	T	Sox2_MA0143.3	25	0	+	0	0	.
chr18	403144	403145	chr18:403145:C:T	rs62087993	C	T	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr18	413462	413463	chr18:413463:C:A	rs7226704	C	A	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr18	421333	421334	chr18:421334:A:G	rs2846651	A	G	A	Sox2_MA0143.3	-17	0	+	0	0	.
chr18	421365	421366	chr18:421366:C:A	rs2621179	C	A	A	Sox2_MA0143.3	15	0	+	0	0	.
chr18	463008	463009	chr18:463009:A:G	rs2621173	A	G	A	Sox2_MA0143.3	-20	0	-	0	0	.
chr18	492193	492194	chr18:492194:T:C	rs1351376	T	C	c	Sox2_MA0143.3	-18	0	-	0	0	.
chr18	515604	515605	chr18:515605:G:A	rs56152366	G	A	G	Sox2_MA0143.3	-11	0	+	0	0	.
chr18	515615	515616	chr18:515616:C:A	rs36031691	C	A	C	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr18	523831	523832	chr18:523832:C:T	rs601697	C	T	T	Sox2_MA0143.3	-13	0	-	0	0	.
chr18	577771	577772	chr18:577772:T:A	rs190947591	T	A	T	Sox2_MA0143.3	15	0	+	0	0	.
chr18	597853	597854	chr18:597854:T:C	rs115542274	T	C	T	Sox2_MA0143.3	-9	0	+	0	0	.
chr18	598141	598142	chr18:598142:T:G	rs1005732567	T	G	T	Sox2_MA0143.3	-5	0	-	0	0	.
chr18	625819	625820	chr18:625820:G:A	rs482080	G	A	A	Sox2_MA0143.3	16	0	-	0	0	.
chr18	682334	682335	chr18:682335:C:A	rs143987220	C	A	C	Sox2_MA0143.3	20	0	-	0	0	.
chr18	745005	745006	chr18:745006:C:T	rs188031497	C	T	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr18	811573	811574	chr18:811574:C:T	rs112328437	C	T	T	Sox2_MA0143.3	12	0	-	0	0	.
chr18	811592	811593	chr18:811593:T:C	rs563946534	T	C	T	Sox2_MA0143.3	-7	0	-	0	0	.
chr18	832669	832670	chr18:832670:C:G	rs116303795	C	G	C	Sox2_MA0143.3	-20	0	-	0	0	.
chr18	845371	845372	chr18:845372:A:G	rs115823347	A	G	A	Sox2_MA0143.3	-5	0	-	0	0	.
chr18	895553	895554	chr18:895554:G:A	rs10775442	G	A	A	Sox2_MA0143.3	-19	0	+	0	0	.
chr18	904653	904654	chr18:904654:A:G	rs143687129	A	G	A	Sox2_MA0143.3	-7	0	-	0	0	.
chr18	1048514	1048515	chr18:1048515:C:T	rs12966215	C	T	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr18	1549849	1549850	chr18:1549850:T:C	rs2080741	T	C	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr18	1549894	1549895	chr18:1549895:A:T	rs11664408	A	T	A	Sox2_MA0143.3	25	0	+	0	0	.
chr18	1550044	1550045	chr18:1550045:T:C	rs8089941	T	C	C	Sox2_MA0143.3	13	0	+	0	0	.
chr18	1595501	1595502	chr18:1595502:G:A	rs11659184	G	A	g	Sox2_MA0143.3	15	0	+	0	0	.
chr18	1784670	1784671	chr18:1784671:A:G	rs72865528	A	G	A	Sox2_MA0143.3	16	0	-	0	0	.
chr18	1846785	1846786	chr18:1846786:C:T	rs76148320	C	T	C	Sox2_MA0143.3	0	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr18	1933976	1933977	chr18:1933977:T:C	rs201880279	T	C	T	Sox2_MA0143.3	-10	0	-	0	0	.
chr18	1934773	1934774	chr18:1934774:A:C	rs35025454	A	C	A	Sox2_MA0143.3	12	0	+	0	0	.
chr18	1934778	1934779	chr18:1934779:C:T	rs6505969	C	T	T	Sox2_MA0143.3	17	0	+	0	0	.
chr18	1954338	1954339	chr18:1954339:T:C	rs1115889	T	C	T	Sox2_MA0143.3	-2	0	+	0	0	.
chr18	2096748	2096749	chr18:2096749:C:T	rs58011708	C	T	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr18	2096767	2096768	chr18:2096768:A:G	rs11662013	A	G	A	Sox2_MA0143.3	12	0	+	0	0	.
chr18	2239799	2239800	chr18:2239800:C:T	rs568822	C	T	T	Sox2_MA0143.3	8	0	+	0	0	.
chr18	2257123	2257124	chr18:2257124:A:G	rs75440890	A	G	A	Sox2_MA0143.3	2	1	+	9.613475778572903	3.494828071296623	CCATTGTT
chr18	2264262	2264263	chr18:2264263:A:G	rs12955130	A	G	A	Sox2_MA0143.3	-5	0	-	0	0	.
chr18	2293411	2293412	chr18:2293412:A:T	rs140535127	A	T	A	Sox2_MA0143.3	18	0	+	0	0	.
chr18	2419228	2419229	chr18:2419229:G:T	rs12607550	G	T	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr18	2513936	2513937	chr18:2513937:G:A	rs11665217	G	A	G	Sox2_MA0143.3	9	0	-	0	0	.
chr18	2518697	2518698	chr18:2518698:C:T	rs3810071	C	T	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr18	2518723	2518724	chr18:2518724:A:G	rs2677886	A	G	A	Sox2_MA0143.3	13	0	+	0	0	.
chr18	2518730	2518731	chr18:2518731:G:A	rs2644169	G	A	G	Sox2_MA0143.3	20	0	+	0	0	.
chr18	2538545	2538546	chr18:2538546:C:A	rs2347279	C	A	C	Sox2_MA0143.3	5	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr18	2555922	2555923	chr18:2555923:A:G	rs2677878	A	G	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr18	2590764	2590765	chr18:2590765:A:G	rs8093338	A	G	A	Sox2_MA0143.3	26	0	+	0	0	.
chr18	2617496	2617497	chr18:2617497:G:A	rs4798006	G	A	G	Sox2_MA0143.3	25	0	-	0	0	.
chr18	2633706	2633707	chr18:2633707:C:T	rs2347810	C	T	T	Sox2_MA0143.3	-5	0	+	0	0	.
chr18	2636320	2636321	chr18:2636321:C:T	rs72634381	C	T	C	Sox2_MA0143.3	8	0	+	0	0	.
chr18	2641610	2641611	chr18:2641611:T:C	rs148783206	T	C	T	Sox2_MA0143.3	-20	0	+	0	0	.
chr18	2641621	2641622	chr18:2641622:T:C	rs11660695	T	C	T	Sox2_MA0143.3	-9	0	+	0	0	.
chr18	2643699	2643700	chr18:2643700:T:C	rs79441652	T	C	T	Sox2_MA0143.3	-17	0	-	0	0	.
chr18	2654848	2654849	chr18:2654849:G:A	rs111495043	G	A	G	Sox2_MA0143.3	14	0	-	0	0	.
chr18	2682167	2682168	chr18:2682168:T:G	rs12954085	T	G	t	Sox2_MA0143.3	-13	0	+	0	0	.
chr18	2888330	2888331	chr18:2888331:C:G	rs35508544	C	G	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr18	2915220	2915221	chr18:2915221:A:G	rs3745013	A	G	A	Sox2_MA0143.3	4	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr18	2961034	2961035	chr18:2961035:T:A	rs652587	T	A	A	Sox2_MA0143.3	-15	0	+	0	0	.
chr18	2983307	2983308	chr18:2983308:C:T	rs8094920	C	T	C	Sox2_MA0143.3	20	0	+	0	0	.
chr18	3032885	3032886	chr18:3032886:C:T	rs79267867	C	T	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr18	3059508	3059509	chr18:3059509:T:C	rs9963424	T	C	T	Sox2_MA0143.3	-11	0	-	0	0	.
chr18	3121453	3121454	chr18:3121454:A:G	rs58564720	A	G	a	Sox2_MA0143.3	4	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr18	3126577	3126578	chr18:3126578:A:G	rs28622195	A	G	a	Sox2_MA0143.3	8	0	-	0	0	.
chr18	3297454	3297455	chr18:3297455:G:C	rs114666590	G	C	G	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr18	3321040	3321041	chr18:3321041:T:C	rs1791118	T	C	T	Sox2_MA0143.3	13	0	+	0	0	.
chr18	3382400	3382401	chr18:3382401:C:T	rs12604343	C	T	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr18	3424359	3424360	chr18:3424360:C:T	rs12455470	C	T	T	Sox2_MA0143.3	-13	0	-	0	0	.
chr18	3446729	3446730	chr18:3446730:T:C	rs141119451	T	C	T	Sox2_MA0143.3	-6	0	-	0	0	.
chr18	3447538	3447539	chr18:3447539:G:C	chr18:3447539:G:C	G	C	G	Sox2_MA0143.3	10	0	+	0	0	.
chr18	3450205	3450206	chr18:3450206:A:T	rs7233448	A	T	A	Sox2_MA0143.3	11	0	-	0	0	.
chr18	3461225	3461226	chr18:3461226:T:C	rs11873061	T	C	T	Sox2_MA0143.3	7	1	+	9.613475778572903	9.019595766176417	CCATTGTT
chr18	3481361	3481362	chr18:3481362:T:C	rs3900800	T	C	T	Sox2_MA0143.3	-12	0	+	0	0	.
chr18	3576174	3576175	chr18:3576175:A:C	rs3862169	A	C	a	Sox2_MA0143.3	-9	0	-	0	0	.
chr18	3613332	3613333	chr18:3613333:C:T	rs1791377	C	T	T	Sox2_MA0143.3	-13	0	-	0	0	.
chr18	3722965	3722966	chr18:3722966:A:G	rs35011214	A	G	A	Sox2_MA0143.3	-14	0	-	0	0	.
chr18	3748285	3748286	chr18:3748286:C:T	rs11659558	C	T	t	Sox2_MA0143.3	10	0	+	0	0	.
chr18	3758803	3758804	chr18:3758804:C:G	rs938387079	C	G	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr18	3794118	3794119	chr18:3794119:T:C	rs4797125	T	C	T	Sox2_MA0143.3	-19	0	+	0	0	.
chr18	3862627	3862628	chr18:3862628:G:C	rs7242609	G	C	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr18	3862632	3862633	chr18:3862633:T:C	rs11660051	T	C	T	Sox2_MA0143.3	-12	0	-	0	0	.
chr18	3932559	3932560	chr18:3932560:G:C	rs113743889	G	C	G	Sox2_MA0143.3	18	0	-	0	0	.
chr18	3985007	3985008	chr18:3985008:A:C	rs9303936	A	C	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr18	4078015	4078016	chr18:4078016:T:A	rs4797143	T	A	T	Sox2_MA0143.3	-10	0	-	0	0	.
chr18	4106682	4106683	chr18:4106683:A:G	rs1470354290	A	G	A	Sox2_MA0143.3	-14	0	+	0	0	.
chr18	4106711	4106712	chr18:4106712:A:G	rs59201120	A	G	A	Sox2_MA0143.3	15	0	+	0	0	.
chr18	4125021	4125022	chr18:4125022:T:A	rs4798174	T	A	T	Sox2_MA0143.3	8	0	-	0	0	.
chr18	4125707	4125708	chr18:4125708:C:G	rs8084562	C	G	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr18	4179259	4179260	chr18:4179260:T:C	rs4798192	T	C	T	Sox2_MA0143.3	3	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr18	4179281	4179282	chr18:4179282:G:A	rs4798193	G	A	A	Sox2_MA0143.3	25	0	+	0	0	.
chr18	4182757	4182758	chr18:4182758:G:A	rs9959484	G	A	A	Sox2_MA0143.3	24	0	-	0	0	.
chr18	4242539	4242540	chr18:4242540:G:A	rs11665220	G	A	G	Sox2_MA0143.3	19	0	-	0	0	.
chr18	4435531	4435532	chr18:4435532:A:G	rs280999	A	G	A	Sox2_MA0143.3	7	1	-	9.800647049772198	9.206767037375712	CCTTTGTT
chr18	4482762	4482763	chr18:4482763:G:A	rs1251940	G	A	G	Sox2_MA0143.3	20	0	-	0	0	.
chr18	4495136	4495137	chr18:4495137:G:A	rs1039657	G	A	A	Sox2_MA0143.3	-18	0	-	0	0	.
chr18	4544381	4544382	chr18:4544382:C:A	rs74885324	C	A	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr18	4640555	4640556	chr18:4640556:G:C	rs9955367	G	C	G	Sox2_MA0143.3	22	0	+	0	0	.
chr18	4759190	4759191	chr18:4759191:T:C	rs8097886	T	C	T	Sox2_MA0143.3	13	0	+	0	0	.
chr18	4889292	4889293	chr18:4889293:T:G	rs148589821	T	G	T	Sox2_MA0143.3	-17	0	+	0	0	.
chr18	5103612	5103613	chr18:5103613:G:C	rs292378	G	C	C	Sox2_MA0143.3	12	0	+	0	0	.
chr18	5144551	5144552	chr18:5144552:T:C	rs996928	T	C	T	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr18	5240850	5240851	chr18:5240851:A:G	rs68113757	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr18	5316702	5316703	chr18:5316703:G:A	rs11665528	G	A	A	Sox2_MA0143.3	14	0	-	0	0	.
chr18	5389033	5389034	chr18:5389034:A:C	rs142773617	A	C	A	Sox2_MA0143.3	14	0	-	0	0	.
chr18	5425135	5425136	chr18:5425136:A:G	rs75011343	A	G	A	Sox2_MA0143.3	25	0	-	0	0	.
chr18	5462392	5462393	chr18:5462393:T:A	rs192403593	T	A	T	Sox2_MA0143.3	20	0	-	0	0	.
chr18	5477709	5477710	chr18:5477710:T:G	rs68175238	T	G	T	Sox2_MA0143.3	17	0	-	0	0	.
chr18	5508052	5508053	chr18:5508053:A:G	rs118004778	A	G	A	Sox2_MA0143.3	17	0	-	0	0	.
chr18	5530796	5530797	chr18:5530797:C:T	rs34292654	C	T	C	Sox2_MA0143.3	10	0	+	0	0	.
chr18	5556697	5556698	chr18:5556698:G:A	rs2186912	G	A	G	Sox2_MA0143.3	7	1	+	8.676919043985553	3.3675628303222993	CCATTGTG
chr18	5556707	5556708	chr18:5556708:G:A	rs1274594962	G	A	G	Sox2_MA0143.3	17	0	+	0	0	.
chr18	5559341	5559342	chr18:5559342:G:C	rs1941002	G	C	G	Sox2_MA0143.3	7	1	-	9.206767037375712	8.864090315184848	CCTTTGTC
chr18	5577047	5577048	chr18:5577048:T:C	rs8085771	T	C	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr18	5577258	5577259	chr18:5577259:T:C	rs11876037	T	C	C	Sox2_MA0143.3	23	0	-	0	0	.
chr18	5693934	5693935	chr18:5693935:A:C	rs12605411	A	C	C	Sox2_MA0143.3	9	0	+	0	0	.
chr18	5693952	5693953	chr18:5693953:C:G	rs34820556	C	G	C	Sox2_MA0143.3	27	0	+	0	0	.
chr18	5840255	5840256	chr18:5840256:A:G	rs11081216	A	G	A	Sox2_MA0143.3	-8	0	+	0	0	.
chr18	5895074	5895075	chr18:5895075:C:A	rs112367039	C	A	c	Sox2_MA0143.3	10	0	-	0	0	.
chr18	5895075	5895076	chr18:5895076:G:A	rs776359924	G	A	G	Sox2_MA0143.3	9	0	-	0	0	.
chr18	5948903	5948904	chr18:5948904:T:C	rs8085884	T	C	T	Sox2_MA0143.3	-5	0	-	0	0	.
chr18	5955554	5955555	chr18:5955555:A:G	rs719153	A	G	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr18	5983703	5983704	chr18:5983704:T:C	rs189949247	T	C	T	Sox2_MA0143.3	2	1	-	8.676919043985553	2.5582713367092715	CCATTGTG
chr18	6270981	6270982	chr18:6270982:A:T	rs11873568	A	T	.	Sox2_MA0143.3	26	0	-	0	0	.
chr18	6271020	6271021	chr18:6271021:G:A	rs576758458	G	A	.	Sox2_MA0143.3	-13	0	-	0	0	.
chr18	6565028	6565029	chr18:6565029:T:C	rs4297786	T	C	C	Sox2_MA0143.3	18	0	+	0	0	.
chr18	6605759	6605760	chr18:6605760:C:T	rs55956406	C	T	C	Sox2_MA0143.3	22	0	-	0	0	.
chr18	6623592	6623593	chr18:6623593:T:A	rs73393308	T	A	A	Sox2_MA0143.3	-7	0	+	0	0	.
chr18	6633582	6633583	chr18:6633583:A:G	rs1941505	A	G	A	Sox2_MA0143.3	-14	0	-	0	0	.
chr18	6646446	6646447	chr18:6646447:C:T	rs9953211	C	T	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr18	6646462	6646463	chr18:6646463:T:C	rs62081431	T	C	T	Sox2_MA0143.3	2	1	+	9.206767037375712	2.900948058900136	CCTTTGTC
chr18	6661771	6661772	chr18:6661772:A:G	rs1080202	A	G	A	Sox2_MA0143.3	4	1	-	9.800647049772198	2.8918922704569785	CCTTTGTT
chr18	6731655	6731656	chr18:6731656:A:G	rs4798487	A	G	G	Sox2_MA0143.3	20	0	+	0	0	.
chr18	6856093	6856094	chr18:6856094:G:C	rs72883092	G	C	G	Sox2_MA0143.3	1	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr18	6886939	6886940	chr18:6886940:A:C	chr18:6886940:A:C	A	C	A	Sox2_MA0143.3	16	0	-	0	0	.
chr18	6921268	6921269	chr18:6921269:T:C	rs1431380	T	C	C	Sox2_MA0143.3	10	0	+	0	0	.
chr18	6923291	6923292	chr18:6923292:A:G	rs566352	A	G	A	Sox2_MA0143.3	-20	0	-	0	0	.
chr18	6963903	6963904	chr18:6963904:C:A	rs575166861	C	A	C	Sox2_MA0143.3	11	0	+	0	0	.
chr18	7064551	7064552	chr18:7064552:A:G	rs116598430	A	G	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr18	7064594	7064595	chr18:7064595:T:C	rs1344197077	T	C	T	Sox2_MA0143.3	26	0	+	0	0	.
chr18	7070642	7070643	chr18:7070643:T:C	rs7240767	T	C	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr18	7094665	7094666	chr18:7094666:T:C	rs2045782	T	C	T	Sox2_MA0143.3	11	0	-	0	0	.
chr18	7116633	7116634	chr18:7116634:C:T	rs12957742	C	T	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr18	7221730	7221731	chr18:7221731:A:G	rs2007808	A	G	G	Sox2_MA0143.3	23	0	+	0	0	.
chr18	7229108	7229109	chr18:7229109:G:A	rs62082838	G	A	G	Sox2_MA0143.3	-14	0	+	0	0	.
chr18	7263772	7263773	chr18:7263773:C:G	rs1421044	C	G	G	Sox2_MA0143.3	22	0	-	0	0	.
chr18	7415261	7415262	chr18:7415262:T:C	rs7241477	T	C	C	Sox2_MA0143.3	-5	0	-	0	0	.
chr18	7772744	7772745	chr18:7772745:C:A	rs867902	C	A	C	Sox2_MA0143.3	5	1	-	9.019595766176417	2.110840986861197	CCATTGTC
chr18	7991715	7991716	chr18:7991716:T:G	rs12454014	T	G	G	Sox2_MA0143.3	25	0	-	0	0	.
chr18	8220449	8220450	chr18:8220450:T:C	rs12954218	T	C	T	Sox2_MA0143.3	-11	0	-	0	0	.
chr18	8232983	8232984	chr18:8232984:G:C	rs8092455	G	C	C	Sox2_MA0143.3	9	0	-	0	0	.
chr18	8334016	8334017	chr18:8334017:T:C	rs101210	T	C	T	Sox2_MA0143.3	22	0	-	0	0	.
chr18	8341611	8341612	chr18:8341612:A:G	rs595649	A	G	A	Sox2_MA0143.3	-4	0	+	0	0	.
chr18	8468118	8468119	chr18:8468119:A:G	rs55687536	A	G	A	Sox2_MA0143.3	4	1	-	9.800647049772198	2.8918922704569785	CCTTTGTT
chr18	8491622	8491623	chr18:8491623:G:T	rs8083849	G	T	T	Sox2_MA0143.3	9	0	-	0	0	.
chr18	8517091	8517092	chr18:8517092:G:T	rs7244952	G	T	T	Sox2_MA0143.3	27	0	-	0	0	.
chr18	8583738	8583739	chr18:8583739:A:G	rs34583596	A	G	a	Sox2_MA0143.3	18	0	+	0	0	.
chr18	8639707	8639708	chr18:8639708:T:C	rs28613225	T	C	T	Sox2_MA0143.3	20	0	-	0	0	.
chr18	8662444	8662445	chr18:8662445:T:G	chr18:8662445:T:G	T	G	T	Sox2_MA0143.3	-10	0	+	0	0	.
chr18	8689853	8689854	chr18:8689854:C:T	rs16953985	C	T	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr18	8707323	8707324	chr18:8707324:G:A	rs476851	G	A	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr18	8707354	8707355	chr18:8707355:C:T	rs78564115	C	T	C	Sox2_MA0143.3	13	0	+	0	0	.
chr18	8740331	8740332	chr18:8740332:G:A	rs688573	G	A	G	Sox2_MA0143.3	26	0	-	0	0	.
chr18	8770518	8770519	chr18:8770519:C:T	rs497084	C	T	T	Sox2_MA0143.3	-14	0	+	0	0	.
chr18	8770524	8770525	chr18:8770525:C:T	rs72936077	C	T	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr18	8780547	8780548	chr18:8780548:A:G	rs75812417	A	G	A	Sox2_MA0143.3	22	0	-	0	0	.
chr18	8789532	8789533	chr18:8789533:T:A	rs62086592	T	A	T	Sox2_MA0143.3	10	0	+	0	0	.
chr18	8856730	8856731	chr18:8856731:T:G	rs12957267	T	G	T	Sox2_MA0143.3	25	0	+	0	0	.
chr18	8883390	8883391	chr18:8883391:A:T	rs75602544	A	T	A	Sox2_MA0143.3	25	0	-	0	0	.
chr18	8899227	8899228	chr18:8899228:A:G	rs55666749	A	G	A	Sox2_MA0143.3	27	0	-	0	0	.
chr18	8899242	8899243	chr18:8899243:C:T	rs55892808	C	T	C	Sox2_MA0143.3	12	0	-	0	0	.
chr18	8911518	8911519	chr18:8911519:A:G	rs55808322	A	G	A	Sox2_MA0143.3	24	0	-	0	0	.
chr18	8995537	8995538	chr18:8995538:T:A	rs67217398	T	A	T	Sox2_MA0143.3	-5	0	+	0	0	.
chr18	9093005	9093006	chr18:9093006:C:T	rs759749014	C	T	C	Sox2_MA0143.3	18	0	+	0	0	.
chr18	9097858	9097859	chr18:9097859:G:A	rs72942538	G	A	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr18	9136515	9136516	chr18:9136516:T:C	rs555312794	T	C	T	Sox2_MA0143.3	3	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr18	9406248	9406249	chr18:9406249:A:G	rs4797367	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr18	9434460	9434461	chr18:9434461:C:T	rs1023928000	C	T	C	Sox2_MA0143.3	1	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr18	9665478	9665479	chr18:9665479:A:G	rs6506679	A	G	G	Sox2_MA0143.3	-14	0	+	0	0	.
chr18	9680407	9680408	chr18:9680408:T:G	rs1295086050	T	G	T	Sox2_MA0143.3	-6	0	-	0	0	.
chr18	9685356	9685357	chr18:9685357:C:T	rs7240605	C	T	C	Sox2_MA0143.3	10	0	+	0	0	.
chr18	9692071	9692072	chr18:9692072:A:G	rs72955994	A	G	A	Sox2_MA0143.3	3	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr18	9704759	9704760	chr18:9704760:A:C	rs59136011	A	C	A	Sox2_MA0143.3	10	0	+	0	0	.
chr18	9755804	9755805	chr18:9755805:C:T	rs568849488	C	T	C	Sox2_MA0143.3	20	0	-	0	0	.
chr18	9755837	9755838	chr18:9755838:G:A	rs11661634	G	A	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr18	9764518	9764519	chr18:9764519:C:T	rs11665156	C	T	C	Sox2_MA0143.3	24	0	-	0	0	.
chr18	9765713	9765714	chr18:9765714:A:T	rs10502392	A	T	T	Sox2_MA0143.3	17	0	-	0	0	.
chr18	9772002	9772003	chr18:9772003:T:G	rs191087194	T	G	T	Sox2_MA0143.3	-13	0	+	0	0	.
chr18	9837015	9837016	chr18:9837016:G:A	rs72477244	G	A	G	Sox2_MA0143.3	-16	0	-	0	0	.
chr18	9855989	9855990	chr18:9855990:G:T	rs62624499	G	T	G	Sox2_MA0143.3	10	0	-	0	0	.
chr18	9869867	9869868	chr18:9869868:T:C	rs9304048	T	C	T	Sox2_MA0143.3	3	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr18	9891590	9891591	chr18:9891591:T:C	rs16955826	T	C	T	Sox2_MA0143.3	-9	0	+	0	0	.
chr18	10020684	10020685	chr18:10020685:A:G	rs666481	A	G	G	Sox2_MA0143.3	4	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr18	10085968	10085969	chr18:10085969:C:T	rs667048	C	T	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr18	10135864	10135865	chr18:10135865:A:C	rs604136	A	C	C	Sox2_MA0143.3	3	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr18	10160447	10160448	chr18:10160448:A:T	rs13381170	A	T	A	Sox2_MA0143.3	6	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr18	10245928	10245929	chr18:10245929:A:C	rs12457062	A	C	A	Sox2_MA0143.3	24	0	+	0	0	.
chr18	10245931	10245932	chr18:10245932:T:C	rs8090792	T	C	C	Sox2_MA0143.3	27	0	+	0	0	.
chr18	10288259	10288260	chr18:10288260:A:G	rs206490	A	G	A	Sox2_MA0143.3	16	0	-	0	0	.
chr18	10295511	10295512	chr18:10295512:G:T	rs206473	G	T	T	Sox2_MA0143.3	11	0	+	0	0	.
chr18	10297209	10297210	chr18:10297210:G:T	rs72957584	G	T	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr18	10297416	10297417	chr18:10297417:A:G	rs11660488	A	G	G	Sox2_MA0143.3	21	0	-	0	0	.
chr18	10330648	10330649	chr18:10330649:G:C	rs206615	G	C	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr18	10350609	10350610	chr18:10350610:T:C	rs206436	T	C	t	Sox2_MA0143.3	-14	0	-	0	0	.
chr18	10374578	10374579	chr18:10374579:G:A	rs8082909	G	A	G	Sox2_MA0143.3	26	0	-	0	0	.
chr18	10379235	10379236	chr18:10379236:A:G	rs206570	A	G	A	Sox2_MA0143.3	-1	0	-	0	0	.
chr18	10387066	10387067	chr18:10387067:G:A	rs2869452	G	A	G	Sox2_MA0143.3	17	0	+	0	0	.
chr18	10387070	10387071	chr18:10387071:T:A	rs113725986	T	A	T	Sox2_MA0143.3	21	0	+	0	0	.
chr18	10421022	10421023	chr18:10421023:C:T	rs77739187	C	T	C	Sox2_MA0143.3	16	0	-	0	0	.
chr18	10429424	10429425	chr18:10429425:T:C	rs10468666	T	C	T	Sox2_MA0143.3	25	0	+	0	0	.
chr18	10447043	10447044	chr18:10447044:A:G	rs2847351	A	G	A	Sox2_MA0143.3	6	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr18	10490927	10490928	chr18:10490928:C:T	rs553703314	C	T	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr18	10490930	10490931	chr18:10490931:C:T	rs961760	C	T	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr18	10744274	10744275	chr18:10744275:T:C	rs150286626	T	C	T	Sox2_MA0143.3	3	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr18	10833817	10833818	chr18:10833818:C:T	rs74526947	C	T	C	Sox2_MA0143.3	15	0	+	0	0	.
chr18	10843730	10843731	chr18:10843731:T:C	rs1728030	T	C	T	Sox2_MA0143.3	-15	0	-	0	0	.
chr18	10971986	10971987	chr18:10971987:T:C	rs264242	T	C	T	Sox2_MA0143.3	22	0	-	0	0	.
chr18	11044737	11044738	chr18:11044738:C:T	rs2660248	C	T	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr18	11046201	11046202	chr18:11046202:C:A	rs72872240	C	A	C	Sox2_MA0143.3	0	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr18	11049356	11049357	chr18:11049357:G:T	rs34326063	G	T	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr18	11051233	11051234	chr18:11051234:C:T	rs7240828	C	T	T	Sox2_MA0143.3	21	0	-	0	0	.
chr18	11055930	11055931	chr18:11055931:T:G	rs2625375	T	G	T	Sox2_MA0143.3	12	0	-	0	0	.
chr18	11176068	11176069	chr18:11176069:T:G	rs1542836	T	G	T	Sox2_MA0143.3	17	0	+	0	0	.
chr18	11176380	11176381	chr18:11176381:C:T	rs9951358	C	T	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr18	11179565	11179566	chr18:11179566:T:C	rs113785349	T	C	T	Sox2_MA0143.3	2	1	+	8.864090315184848	2.5582713367092715	CCTTTGTG
chr18	11253823	11253824	chr18:11253824:C:A	rs4797514	C	A	C	Sox2_MA0143.3	22	0	-	0	0	.
chr18	11292053	11292054	chr18:11292054:C:G	chr18:11292054:C:G	C	G	C	Sox2_MA0143.3	15	0	-	0	0	.
chr18	11378480	11378481	chr18:11378481:A:G	rs6505645	A	G	G	Sox2_MA0143.3	-12	0	+	0	0	.
chr18	11499210	11499211	chr18:11499211:C:T	rs72875558	C	T	.	Sox2_MA0143.3	-8	0	+	0	0	.
chr18	11499237	11499238	chr18:11499238:A:G	rs72875561	A	G	.	Sox2_MA0143.3	19	0	+	0	0	.
chr18	11679590	11679591	chr18:11679591:G:A	rs56392464	G	A	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr18	11680542	11680543	chr18:11680543:C:A	rs1031589448	C	A	c	Sox2_MA0143.3	-14	0	+	0	0	.
chr18	11760869	11760870	chr18:11760870:T:C	rs77058384	T	C	t	Sox2_MA0143.3	24	0	+	0	0	.
chr18	11796267	11796268	chr18:11796268:A:G	rs116989726	A	G	A	Sox2_MA0143.3	7	1	-	9.800647049772198	9.206767037375712	CCTTTGTT
chr18	11859352	11859353	chr18:11859353:G:A	rs8192487	G	A	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr18	11872875	11872876	chr18:11872876:C:T	rs9954486	C	T	C	Sox2_MA0143.3	0	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr18	11872892	11872893	chr18:11872893:A:G	rs12456112	A	G	G	Sox2_MA0143.3	17	0	+	0	0	.
chr18	11947820	11947821	chr18:11947821:C:T	rs150203468	C	T	C	Sox2_MA0143.3	5	1	-	9.019595766176417	2.110840986861197	CCATTGTC
chr18	11983073	11983074	chr18:11983074:G:A	rs662383	G	A	g	Sox2_MA0143.3	-11	0	+	0	0	.
chr18	11987272	11987273	chr18:11987273:C:T	rs7506045	C	T	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr18	12005933	12005934	chr18:12005934:A:G	rs3786296	A	G	A	Sox2_MA0143.3	16	0	+	0	0	.
chr18	12006252	12006253	chr18:12006253:C:T	rs3786291	C	T	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr18	12041258	12041259	chr18:12041259:A:T	rs12958278	A	T	A	Sox2_MA0143.3	20	0	-	0	0	.
chr18	12062985	12062986	chr18:12062986:A:G	rs11875970	A	G	A	Sox2_MA0143.3	18	0	-	0	0	.
chr18	12073686	12073687	chr18:12073687:C:T	rs75381528	C	T	.	Sox2_MA0143.3	20	0	-	0	0	.
chr18	12073687	12073688	chr18:12073688:A:G	rs76892988	A	G	.	Sox2_MA0143.3	19	0	-	0	0	.
chr18	12092364	12092365	chr18:12092365:C:A	rs13381564	C	A	.	Sox2_MA0143.3	9	0	-	0	0	.
chr18	12274104	12274105	chr18:12274105:G:T	rs11545881	G	T	g	Sox2_MA0143.3	24	0	+	0	0	.
chr18	12283078	12283079	chr18:12283079:G:T	rs72871508	G	T	g	Sox2_MA0143.3	-8	0	+	0	0	.
chr18	12283547	12283548	chr18:12283548:A:G	rs7229921	A	G	a	Sox2_MA0143.3	11	0	-	0	0	.
chr18	12317669	12317670	chr18:12317670:T:C	rs8099636	T	C	N	Sox2_MA0143.3	-9	0	+	0	0	.
chr18	12317690	12317691	chr18:12317691:T:C	rs9284396	T	C	N	Sox2_MA0143.3	12	0	+	0	0	.
chr18	12338470	12338471	chr18:12338471:C:T	rs11080571	C	T	C	Sox2_MA0143.3	18	0	-	0	0	.
chr18	12365515	12365516	chr18:12365516:C:T	rs3786260	C	T	C	Sox2_MA0143.3	14	0	-	0	0	.
chr18	12415811	12415812	chr18:12415812:C:T	rs73401980	C	T	C	Sox2_MA0143.3	17	0	+	0	0	.
chr18	12455692	12455693	chr18:12455693:C:A	rs145936738	C	A	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr18	12630957	12630958	chr18:12630958:G:A	rs12604541	G	A	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr18	12701326	12701327	chr18:12701327:A:C	rs45596833	A	C	A	Sox2_MA0143.3	21	0	+	0	0	.
chr18	12703322	12703323	chr18:12703323:G:C	rs530487428	G	C	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr18	12745280	12745281	chr18:12745281:T:G	rs370629980	T	G	T	Sox2_MA0143.3	23	0	+	0	0	.
chr18	12747235	12747236	chr18:12747236:C:T	rs2847249	C	T	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr18	12758355	12758356	chr18:12758356:A:T	rs2155735	A	T	A	Sox2_MA0143.3	13	0	-	0	0	.
chr18	12933472	12933473	chr18:12933473:T:G	rs11080613	T	G	T	Sox2_MA0143.3	-9	0	+	0	0	.
chr18	12977945	12977946	chr18:12977946:A:G	rs72636758	A	G	A	Sox2_MA0143.3	25	0	-	0	0	.
chr18	13138170	13138171	chr18:13138171:T:C	rs72877635	T	C	T	Sox2_MA0143.3	13	0	-	0	0	.
chr18	13255295	13255296	chr18:13255296:A:G	rs1462766123	A	G	A	Sox2_MA0143.3	6	1	-	9.019595766176417	2.110840986861197	CCATTGTC
chr18	13280590	13280591	chr18:13280591:C:T	rs375228157	C	T	c	Sox2_MA0143.3	17	0	-	0	0	.
chr18	13281865	13281866	chr18:13281866:C:T	rs4797757	C	T	T	Sox2_MA0143.3	24	0	+	0	0	.
chr18	13313747	13313748	chr18:13313748:C:T	rs9303783	C	T	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr18	13318946	13318947	chr18:13318947:C:T	rs112198661	C	T	C	Sox2_MA0143.3	9	0	+	0	0	.
chr18	13337559	13337560	chr18:13337560:A:T	rs1225	A	T	A	Sox2_MA0143.3	-13	0	-	0	0	.
chr18	13359439	13359440	chr18:13359440:A:G	rs145371099	A	G	A	Sox2_MA0143.3	15	0	-	0	0	.
chr18	13379202	13379203	chr18:13379203:C:A	rs56198436	C	A	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr18	13460078	13460079	chr18:13460079:T:C	rs59719495	T	C	T	Sox2_MA0143.3	20	0	-	0	0	.
chr18	13483401	13483402	chr18:13483402:A:G	rs77677357	A	G	A	Sox2_MA0143.3	9	0	+	0	0	.
chr18	13500583	13500584	chr18:13500584:A:G	rs1424844961	A	G	A	Sox2_MA0143.3	9	0	+	0	0	.
chr18	13500681	13500682	chr18:13500682:A:G	rs142109724	A	G	A	Sox2_MA0143.3	3	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr18	13500691	13500692	chr18:13500692:T:C	rs940809845	T	C	T	Sox2_MA0143.3	-7	0	-	0	0	.
chr18	13500986	13500987	chr18:13500987:C:T	rs6505817	C	T	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr18	13531143	13531144	chr18:13531144:T:C	rs11873920	T	C	T	Sox2_MA0143.3	25	0	-	0	0	.
chr18	13611307	13611308	chr18:13611308:A:G	rs910077973	A	G	A	Sox2_MA0143.3	17	0	-	0	0	.
chr18	13727966	13727967	chr18:13727967:A:G	rs7244404	A	G	A	Sox2_MA0143.3	18	0	+	0	0	.
chr18	13824785	13824786	chr18:13824786:G:T	rs74334445	G	T	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr18	13826088	13826089	chr18:13826089:C:T	rs17848292	C	T	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr18	13916792	13916793	chr18:13916793:C:T	rs139682011	C	T	C	Sox2_MA0143.3	5	1	-	9.019595766176417	2.110840986861197	CCATTGTC
chr18	14093049	14093050	chr18:14093050:T:C	rs56001344	T	C	t	Sox2_MA0143.3	-12	0	-	0	0	.
chr18	14132428	14132429	chr18:14132429:T:C	rs956859542	T	C	-	Sox2_MA0143.3	10	0	-	0	0	.
chr18	14827250	14827251	chr18:14827251:G:A	rs537587503	G	A	g	Sox2_MA0143.3	-20	0	-	0	0	.
chr18	14856504	14856505	chr18:14856505:G:A	rs375475724	G	A	g	Sox2_MA0143.3	-8	0	-	0	0	.
chr18	14878191	14878192	chr18:14878192:G:A	rs786050	G	A	.	Sox2_MA0143.3	-12	0	+	0	0	.
chr18	14942150	14942151	chr18:14942151:G:A	rs2460072	G	A	.	Sox2_MA0143.3	16	0	-	0	0	.
chr18	14947862	14947863	chr18:14947863:A:G	rs786046	A	G	.	Sox2_MA0143.3	-20	0	+	0	0	.
chr18	14985824	14985825	chr18:14985825:G:C	rs145214392	G	C	.	Sox2_MA0143.3	-16	0	+	0	0	.
chr18	14986956	14986957	chr18:14986957:A:T	rs3877190	A	T	.	Sox2_MA0143.3	17	0	-	0	0	.
chr18	15410057	15410058	chr18:15410058:A:C	rs7228298	A	C	.	Sox2_MA0143.3	-19	0	+	0	0	.
chr18	21502912	21502913	chr18:21502913:G:A	rs1004173661	G	A	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr18	21759556	21759557	chr18:21759557:A:T	rs535859020	A	T	T	Sox2_MA0143.3	18	0	+	0	0	.
chr18	21933984	21933985	chr18:21933985:G:A	rs77806725	G	A	G	Sox2_MA0143.3	24	0	+	0	0	.
chr18	22084136	22084137	chr18:22084137:G:A	rs9953528	G	A	A	Sox2_MA0143.3	-12	0	+	0	0	.
chr18	22247581	22247582	chr18:22247582:A:G	rs12327009	A	G	A	Sox2_MA0143.3	-14	0	+	0	0	.
chr18	22286638	22286639	chr18:22286639:G:A	rs8086214	G	A	G	Sox2_MA0143.3	10	0	-	0	0	.
chr18	22468039	22468040	chr18:22468040:A:G	chr18:22468040:A:G	A	G	A	Sox2_MA0143.3	22	0	-	0	0	.
chr18	22526125	22526126	chr18:22526126:G:A	rs615620	G	A	A	Sox2_MA0143.3	-1	0	-	0	0	.
chr18	22549640	22549641	chr18:22549641:C:T	rs112131928	C	T	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr18	22561982	22561983	chr18:22561983:G:C	rs7228012	G	C	G	Sox2_MA0143.3	26	0	-	0	0	.
chr18	22964379	22964380	chr18:22964380:T:G	rs1902921	T	G	T	Sox2_MA0143.3	27	0	+	0	0	.
chr18	23032647	23032648	chr18:23032648:T:C	rs112070902	T	C	T	Sox2_MA0143.3	-10	0	+	0	0	.
chr18	23032668	23032669	chr18:23032669:A:G	rs6507455	A	G	G	Sox2_MA0143.3	11	0	+	0	0	.
chr18	23087630	23087631	chr18:23087631:G:A	rs12965742	G	A	G	Sox2_MA0143.3	23	0	+	0	0	.
chr18	23101388	23101389	chr18:23101389:A:G	rs60048129	A	G	G	Sox2_MA0143.3	4	1	-	8.676919043985553	1.7681642646703322	CCATTGTG
chr18	23121461	23121462	chr18:23121462:A:G	rs11663717	A	G	-	Sox2_MA0143.3	-20	0	-	0	0	.
chr18	23151965	23151966	chr18:23151966:A:G	rs4239436	A	G	A	Sox2_MA0143.3	6	1	-	8.676919043985553	1.7681642646703326	CCATTGTG
chr18	23282374	23282375	chr18:23282375:G:A	rs73404515	G	A	G	Sox2_MA0143.3	20	0	+	0	0	.
chr18	23312079	23312080	chr18:23312080:C:A	rs12373366	C	A	C	Sox2_MA0143.3	21	0	+	0	0	.
chr18	23339609	23339610	chr18:23339610:A:C	rs9807593	A	C	A	Sox2_MA0143.3	-19	0	-	0	0	.
chr18	23357006	23357007	chr18:23357007:A:G	rs555654574	A	G	A	Sox2_MA0143.3	24	0	-	0	0	.
chr18	23574307	23574308	chr18:23574308:T:C	rs529697295	T	C	T	Sox2_MA0143.3	14	0	-	0	0	.
chr18	23619088	23619089	chr18:23619089:T:C	rs7227518	T	C	T	Sox2_MA0143.3	-11	0	-	0	0	.
chr18	23825588	23825589	chr18:23825589:A:G	rs8098244	A	G	G	Sox2_MA0143.3	6	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr18	23891803	23891804	chr18:23891804:C:T	rs1786044	C	T	T	Sox2_MA0143.3	-12	0	+	0	0	.
chr18	23994393	23994394	chr18:23994394:T:C	rs16940404	T	C	T	Sox2_MA0143.3	22	0	+	0	0	.
chr18	23994494	23994495	chr18:23994495:A:G	rs8089140	A	G	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr18	24021927	24021928	chr18:24021928:T:G	chr18:24021928:T:G	T	G	T	Sox2_MA0143.3	-12	0	-	0	0	.
chr18	24108264	24108265	chr18:24108265:A:G	rs9304430	A	G	A	Sox2_MA0143.3	25	0	+	0	0	.
chr18	24169650	24169651	chr18:24169651:G:A	rs9635963	G	A	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr18	24188415	24188416	chr18:24188416:G:A	rs17797779	G	A	G	Sox2_MA0143.3	8	0	-	0	0	.
chr18	24199549	24199550	chr18:24199550:C:T	rs61449388	C	T	C	Sox2_MA0143.3	20	0	-	0	0	.
chr18	24208331	24208332	chr18:24208332:G:A	rs6508259	G	A	G	Sox2_MA0143.3	19	0	-	0	0	.
chr18	24216193	24216194	chr18:24216194:G:A	rs8087879	G	A	A	Sox2_MA0143.3	-1	0	+	0	0	.
chr18	24228638	24228639	chr18:24228639:G:A	rs76322847	G	A	G	Sox2_MA0143.3	11	0	-	0	0	.
chr18	24273620	24273621	chr18:24273621:A:G	rs117315247	A	G	A	Sox2_MA0143.3	20	0	+	0	0	.
chr18	24357273	24357274	chr18:24357274:G:A	rs1030111	G	A	A	Sox2_MA0143.3	-17	0	+	0	0	.
chr18	24397244	24397245	chr18:24397245:T:A	rs371078715	T	A	T	Sox2_MA0143.3	-10	0	+	0	0	.
chr18	24397271	24397272	chr18:24397272:T:C	rs758475851	T	C	T	Sox2_MA0143.3	17	0	+	0	0	.
chr18	24414413	24414414	chr18:24414414:T:C	rs534604274	T	C	T	Sox2_MA0143.3	9	0	-	0	0	.
chr18	24500957	24500958	chr18:24500958:G:A	rs73400257	G	A	G	Sox2_MA0143.3	-14	0	+	0	0	.
chr18	24510938	24510939	chr18:24510939:G:A	rs2111661	G	A	G	Sox2_MA0143.3	1	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr18	24517927	24517928	chr18:24517928:A:G	rs637668	A	G	G	Sox2_MA0143.3	12	0	-	0	0	.
chr18	24561703	24561704	chr18:24561704:C:T	rs60044168	C	T	C	Sox2_MA0143.3	10	0	+	0	0	.
chr18	24589459	24589460	chr18:24589460:T:C	rs9304469	T	C	T	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr18	24602288	24602289	chr18:24602289:T:C	rs116290016	T	C	T	Sox2_MA0143.3	11	0	+	0	0	.
chr18	24694933	24694934	chr18:24694934:A:G	rs1668071	A	G	A	Sox2_MA0143.3	-15	0	+	0	0	.
chr18	24811977	24811978	chr18:24811978:C:G	rs16941013	C	G	C	Sox2_MA0143.3	0	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr18	24861447	24861448	chr18:24861448:C:G	rs7239472	C	G	G	Sox2_MA0143.3	11	0	+	0	0	.
chr18	24861448	24861449	chr18:24861449:T:A	rs7244206	T	A	A	Sox2_MA0143.3	12	0	+	0	0	.
chr18	24866134	24866135	chr18:24866135:A:C	rs4800604	A	C	A	Sox2_MA0143.3	26	0	-	0	0	.
chr18	24877659	24877660	chr18:24877660:G:A	rs117781334	G	A	G	Sox2_MA0143.3	-5	0	+	0	0	.
chr18	24880820	24880821	chr18:24880821:A:G	rs12964517	A	G	A	Sox2_MA0143.3	-15	0	-	0	0	.
chr18	25112291	25112292	chr18:25112292:C:T	rs4423504	C	T	T	Sox2_MA0143.3	-7	0	-	0	0	.
chr18	25115367	25115368	chr18:25115368:A:G	rs4132769	A	G	A	Sox2_MA0143.3	10	0	+	0	0	.
chr18	25153863	25153864	chr18:25153864:C:G	rs4377227	C	G	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr18	25613372	25613373	chr18:25613373:C:T	rs273756	C	T	C	Sox2_MA0143.3	8	0	-	0	0	.
chr18	25706835	25706836	chr18:25706836:C:T	rs1962672	C	T	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr18	25827993	25827994	chr18:25827994:T:G	rs997242	T	G	G	Sox2_MA0143.3	12	0	+	0	0	.
chr18	25861194	25861195	chr18:25861195:T:C	rs8098773	T	C	C	Sox2_MA0143.3	16	0	-	0	0	.
chr18	25902712	25902713	chr18:25902713:C:A	rs4800235	C	A	C	Sox2_MA0143.3	23	0	-	0	0	.
chr18	25990732	25990733	chr18:25990733:G:A	rs7240105	G	A	G	Sox2_MA0143.3	12	0	+	0	0	.
chr18	26018195	26018196	chr18:26018196:A:T	rs607404	A	T	A	Sox2_MA0143.3	9	0	-	0	0	.
chr18	26083400	26083401	chr18:26083401:T:C	rs56813627	T	C	T	Sox2_MA0143.3	13	0	-	0	0	.
chr18	26083427	26083428	chr18:26083428:T:G	rs11877974	T	G	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr18	26386302	26386303	chr18:26386303:G:A	rs9958336	G	A	G	Sox2_MA0143.3	25	0	+	0	0	.
chr18	26481404	26481405	chr18:26481405:C:A	rs143485997	C	A	G	Sox2_MA0143.3	14	0	-	0	0	.
chr18	26548463	26548464	chr18:26548464:C:T	chr18:26548464:C:T	C	T	C	Sox2_MA0143.3	13	0	+	0	0	.
chr18	26630766	26630767	chr18:26630767:T:G	rs533289	T	G	G	Sox2_MA0143.3	-11	0	+	0	0	.
chr18	26649980	26649981	chr18:26649981:G:A	rs8094879	G	A	G	Sox2_MA0143.3	8	0	+	0	0	.
chr18	26655749	26655750	chr18:26655750:T:C	rs1051480558	T	C	T	Sox2_MA0143.3	17	0	-	0	0	.
chr18	26656594	26656595	chr18:26656595:C:A	rs538589715	C	A	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr18	26683760	26683761	chr18:26683761:G:A	rs562562	G	A	A	Sox2_MA0143.3	21	0	-	0	0	.
chr18	26711965	26711966	chr18:26711966:C:T	rs1817000	C	T	C	Sox2_MA0143.3	22	0	+	0	0	.
chr18	26724427	26724428	chr18:26724428:C:T	rs470930	C	T	T	Sox2_MA0143.3	18	0	+	0	0	.
chr18	26740361	26740362	chr18:26740362:C:T	rs535796	C	T	T	Sox2_MA0143.3	-6	0	-	0	0	.
chr18	26801793	26801794	chr18:26801794:G:C	rs495970	G	C	G	Sox2_MA0143.3	19	0	-	0	0	.
chr18	26803954	26803955	chr18:26803955:A:G	rs2339219	A	G	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr18	26812644	26812645	chr18:26812645:G:C	rs581441	G	C	G	Sox2_MA0143.3	14	0	+	0	0	.
chr18	26899597	26899598	chr18:26899598:A:G	rs630285	A	G	A	Sox2_MA0143.3	-11	0	+	0	0	.
chr18	26901307	26901308	chr18:26901308:A:G	rs17621185	A	G	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr18	26919352	26919353	chr18:26919353:G:A	rs190166	G	A	A	Sox2_MA0143.3	7	1	+	8.864090315184848	3.5547341015215945	CCTTTGTG
chr18	27023888	27023889	chr18:27023889:T:A	rs71353424	T	A	T	Sox2_MA0143.3	2	1	+	3.5547341015215945	3.3675628303222993	CCTTTGTA
chr18	27095541	27095542	chr18:27095542:A:G	rs9952135	A	G	A	Sox2_MA0143.3	16	0	+	0	0	.
chr18	27500708	27500709	chr18:27500709:C:T	rs74460424	C	T	C	Sox2_MA0143.3	25	0	+	0	0	.
chr18	27500720	27500721	chr18:27500721:A:G	rs76513968	A	G	G	Sox2_MA0143.3	3	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr18	27599430	27599431	chr18:27599431:G:T	rs1362728	G	T	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr18	27599450	27599451	chr18:27599451:G:A	rs77947625	G	A	G	Sox2_MA0143.3	7	1	+	8.864090315184848	3.5547341015215945	CCTTTGTG
chr18	27599452	27599453	chr18:27599453:A:G	rs59226519	A	G	A	Sox2_MA0143.3	9	0	+	0	0	.
chr18	27609369	27609370	chr18:27609370:A:G	rs75211460	A	G	A	Sox2_MA0143.3	4	1	-	3.5547341015215945	-3.3540206777936254	CCTTTGTA
chr18	27646052	27646053	chr18:27646053:T:A	rs28678698	T	A	A	Sox2_MA0143.3	-6	0	+	0	0	.
chr18	27705005	27705006	chr18:27705006:T:A	rs72890855	T	A	a	Sox2_MA0143.3	27	0	-	0	0	.
chr18	27714368	27714369	chr18:27714369:G:A	rs8089423	G	A	G	Sox2_MA0143.3	1	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr18	27749942	27749943	chr18:27749943:G:A	rs28722913	G	A	G	Sox2_MA0143.3	-16	0	-	0	0	.
chr18	27762385	27762386	chr18:27762386:G:A	rs77128701	G	A	G	Sox2_MA0143.3	18	0	+	0	0	.
chr18	27861406	27861407	chr18:27861407:A:C	rs59245344	A	C	A	Sox2_MA0143.3	23	0	+	0	0	.
chr18	27901808	27901809	chr18:27901809:A:G	rs12956070	A	G	A	Sox2_MA0143.3	-5	0	-	0	0	.
chr18	27901817	27901818	chr18:27901818:A:G	rs11564334	A	G	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr18	27903967	27903968	chr18:27903968:G:A	rs12968545	G	A	g	Sox2_MA0143.3	-6	0	-	0	0	.
chr18	28073898	28073899	chr18:28073899:G:A	rs17494339	G	A	G	Sox2_MA0143.3	21	0	-	0	0	.
chr18	28110319	28110320	chr18:28110320:C:G	rs11564388	C	G	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr18	28110361	28110362	chr18:28110362:G:A	rs188528759	G	A	G	Sox2_MA0143.3	23	0	+	0	0	.
chr18	28284783	28284784	chr18:28284784:A:C	rs12608255	A	C	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr18	28342007	28342008	chr18:28342008:C:T	rs11083270	C	T	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr18	28411231	28411232	chr18:28411232:G:A	rs10502509	G	A	G	Sox2_MA0143.3	17	0	+	0	0	.
chr18	28729582	28729583	chr18:28729583:T:G	rs981478797	T	G	T	Sox2_MA0143.3	24	0	+	0	0	.
chr18	28789474	28789475	chr18:28789475:A:G	rs111910580	A	G	A	Sox2_MA0143.3	9	0	+	0	0	.
chr18	29148045	29148046	chr18:29148046:T:C	rs774497316	T	C	T	Sox2_MA0143.3	-11	0	+	0	0	.
chr18	29148078	29148079	chr18:29148079:C:T	rs73416173	C	T	T	Sox2_MA0143.3	22	0	+	0	0	.
chr18	29251909	29251910	chr18:29251910:T:C	rs11873072	T	C	C	Sox2_MA0143.3	4	1	+	8.864090315184848	1.9553355358696274	CCTTTGTG
chr18	29507350	29507351	chr18:29507351:T:C	rs78045782	T	C	T	Sox2_MA0143.3	14	0	+	0	0	.
chr18	29523035	29523036	chr18:29523036:T:C	rs67332669	T	C	T	Sox2_MA0143.3	-15	0	+	0	0	.
chr18	29841899	29841900	chr18:29841900:G:A	rs117669587	G	A	G	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr18	30060061	30060062	chr18:30060062:G:A	rs553408251	G	A	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr18	30631906	30631907	chr18:30631907:T:C	rs2419373	T	C	T	Sox2_MA0143.3	15	0	+	0	0	.
chr18	30814060	30814061	chr18:30814061:A:C	rs2000803	A	C	A	Sox2_MA0143.3	-11	0	-	0	0	.
chr18	31242142	31242143	chr18:31242143:C:G	rs113991051	C	G	C	Sox2_MA0143.3	20	0	+	0	0	.
chr18	31269193	31269194	chr18:31269194:G:A	chr18:31269194:G:A	G	A	G	Sox2_MA0143.3	1	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr18	31269193	31269194	chr18:31269194:G:C	rs16961588	G	C	G	Sox2_MA0143.3	1	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr18	31416024	31416025	chr18:31416025:A:C	rs7230418	A	C	C	Sox2_MA0143.3	3	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr18	31581401	31581402	chr18:31581402:T:C	rs2420813	T	C	T	Sox2_MA0143.3	6	1	+	9.206767037375712	2.298012258060492	CCTTTGTC
chr18	31679976	31679977	chr18:31679977:A:G	rs7240561	A	G	A	Sox2_MA0143.3	20	0	-	0	0	.
chr18	31954862	31954863	chr18:31954863:T:G	rs12326193	T	G	t	Sox2_MA0143.3	-10	0	+	0	0	.
chr18	31957695	31957696	chr18:31957696:G:C	rs4344833	G	C	C	Sox2_MA0143.3	18	0	-	0	0	.
chr18	32041009	32041010	chr18:32041010:C:G	rs72934872	C	G	c	Sox2_MA0143.3	20	0	+	0	0	.
chr18	32093591	32093592	chr18:32093592:C:T	rs28574941	C	T	-	Sox2_MA0143.3	23	0	+	0	0	.
chr18	32118229	32118230	chr18:32118230:T:C	rs7229437	T	C	T	Sox2_MA0143.3	-14	0	+	0	0	.
chr18	32249378	32249379	chr18:32249379:C:T	rs11662069	C	T	t	Sox2_MA0143.3	20	0	+	0	0	.
chr18	32270332	32270333	chr18:32270333:G:A	rs6506966	G	A	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr18	32329824	32329825	chr18:32329825:G:A	rs1661817	G	A	G	Sox2_MA0143.3	18	0	+	0	0	.
chr18	32424778	32424779	chr18:32424779:A:G	rs76911361	A	G	A	Sox2_MA0143.3	-9	0	+	0	0	.
chr18	32549009	32549010	chr18:32549010:A:G	rs144778958	A	G	A	Sox2_MA0143.3	20	0	-	0	0	.
chr18	32576586	32576587	chr18:32576587:C:T	rs144440193	C	T	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr18	32576618	32576619	chr18:32576619:A:G	rs59288996	A	G	A	Sox2_MA0143.3	14	0	+	0	0	.
chr18	32727910	32727911	chr18:32727911:G:A	rs10502606	G	A	g	Sox2_MA0143.3	-20	0	+	0	0	.
chr18	32881213	32881214	chr18:32881214:T:C	rs8090702	T	C	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr18	32882511	32882512	chr18:32882512:T:C	rs75285446	T	C	T	Sox2_MA0143.3	7	1	-	3.5547341015215945	8.864090315184848	CCTTTGTA
chr18	33035407	33035408	chr18:33035408:C:A	rs73415473	C	A	C	Sox2_MA0143.3	11	0	-	0	0	.
chr18	33145803	33145804	chr18:33145804:A:G	rs271500	A	G	G	Sox2_MA0143.3	-5	0	+	0	0	.
chr18	33459826	33459827	chr18:33459827:G:C	rs11081812	G	C	G	Sox2_MA0143.3	0	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr18	33647246	33647247	chr18:33647247:G:T	rs12456504	G	T	G	Sox2_MA0143.3	20	0	+	0	0	.
chr18	34697786	34697787	chr18:34697787:G:A	rs141154819	G	A	G	Sox2_MA0143.3	10	0	+	0	0	.
chr18	34697799	34697800	chr18:34697800:C:G	rs16965776	C	G	C	Sox2_MA0143.3	23	0	+	0	0	.
chr18	34734272	34734273	chr18:34734273:G:A	rs1842410	G	A	G	Sox2_MA0143.3	-3	0	-	0	0	.
chr18	34781047	34781048	chr18:34781048:G:C	rs7236971	G	C	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr18	34848915	34848916	chr18:34848916:G:A	rs77060598	G	A	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr18	34957099	34957100	chr18:34957100:T:C	rs606322	T	C	C	Sox2_MA0143.3	14	0	-	0	0	.
chr18	34979487	34979488	chr18:34979488:A:G	rs900851129	A	G	A	Sox2_MA0143.3	15	0	+	0	0	.
chr18	35000751	35000752	chr18:35000752:A:T	rs77048453	A	T	A	Sox2_MA0143.3	25	0	-	0	0	.
chr18	35006152	35006153	chr18:35006153:C:A	rs78719144	C	A	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr18	35090049	35090050	chr18:35090050:A:G	rs28845240	A	G	A	Sox2_MA0143.3	-12	0	-	0	0	.
chr18	35090056	35090057	chr18:35090057:T:C	rs476348	T	C	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr18	35462472	35462473	chr18:35462473:G:C	rs12962513	G	C	C	Sox2_MA0143.3	21	0	+	0	0	.
chr18	35579520	35579521	chr18:35579521:G:A	rs495050	G	A	G	Sox2_MA0143.3	22	0	-	0	0	.
chr18	35730151	35730152	chr18:35730152:C:T	rs116135624	C	T	C	Sox2_MA0143.3	16	0	+	0	0	.
chr18	35798226	35798227	chr18:35798227:T:C	rs12606157	T	C	T	Sox2_MA0143.3	-17	0	-	0	0	.
chr18	35852883	35852884	chr18:35852884:T:C	rs7243571	T	C	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr18	35852916	35852917	chr18:35852917:C:T	rs28414221	C	T	C	Sox2_MA0143.3	0	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr18	35852918	35852919	chr18:35852919:A:G	rs79151494	A	G	A	Sox2_MA0143.3	2	1	+	9.019595766176417	2.900948058900136	CCATTGTC
chr18	35863609	35863610	chr18:35863610:C:T	rs62100755	C	T	T	Sox2_MA0143.3	-20	0	+	0	0	.
chr18	35934259	35934260	chr18:35934260:A:G	rs72889071	A	G	A	Sox2_MA0143.3	18	0	+	0	0	.
chr18	36068093	36068094	chr18:36068094:G:T	rs149227628	G	T	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr18	36129679	36129680	chr18:36129680:T:C	chr18:36129680:T:C	T	C	T	Sox2_MA0143.3	10	0	-	0	0	.
chr18	36129700	36129701	chr18:36129701:T:G	rs1631346	T	G	t	Sox2_MA0143.3	-11	0	-	0	0	.
chr18	36149907	36149908	chr18:36149908:A:G	rs1785910	A	G	G	Sox2_MA0143.3	-2	0	+	0	0	.
chr18	36189864	36189865	chr18:36189865:A:G	rs68078867	A	G	A	Sox2_MA0143.3	-16	0	+	0	0	.
chr18	36213615	36213616	chr18:36213616:A:G	rs140206674	A	G	A	Sox2_MA0143.3	-2	0	-	0	0	.
chr18	36346670	36346671	chr18:36346671:T:C	rs12326939	T	C	T	Sox2_MA0143.3	17	0	+	0	0	.
chr18	36398575	36398576	chr18:36398576:C:G	rs12606914	C	G	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr18	36401465	36401466	chr18:36401466:T:C	chr18:36401466:T:C	T	C	T	Sox2_MA0143.3	-15	0	+	0	0	.
chr18	36424909	36424910	chr18:36424910:C:T	rs114034871	C	T	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr18	36532872	36532873	chr18:36532873:A:G	rs12457657	A	G	A	Sox2_MA0143.3	15	0	+	0	0	.
chr18	36580572	36580573	chr18:36580573:C:G	rs74866978	C	G	C	Sox2_MA0143.3	5	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr18	36629269	36629270	chr18:36629270:G:A	rs184525674	G	A	G	Sox2_MA0143.3	12	0	+	0	0	.
chr18	36775615	36775616	chr18:36775616:T:G	rs17567496	T	G	T	Sox2_MA0143.3	7	1	+	9.613475778572903	8.676919043985553	CCATTGTT
chr18	37303118	37303119	chr18:37303119:T:G	rs11081997	T	G	T	Sox2_MA0143.3	17	0	+	0	0	.
chr18	37392573	37392574	chr18:37392574:A:G	rs604277	A	G	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr18	37450285	37450286	chr18:37450286:T:C	rs914090429	T	C	T	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr18	37450980	37450981	chr18:37450981:G:A	rs28501509	G	A	G	Sox2_MA0143.3	-11	0	+	0	0	.
chr18	37450989	37450990	chr18:37450990:C:T	rs78271015	C	T	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr18	37525022	37525023	chr18:37525023:T:G	rs73947546	T	G	T	Sox2_MA0143.3	2	1	+	9.800647049772198	3.494828071296623	CCTTTGTT
chr18	37854643	37854644	chr18:37854644:C:G	rs60205208	C	G	C	Sox2_MA0143.3	19	0	+	0	0	.
chr18	37958795	37958796	chr18:37958796:G:A	rs62081359	G	A	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr18	38053146	38053147	chr18:38053147:G:A	rs56085859	G	A	G	Sox2_MA0143.3	20	0	-	0	0	.
chr18	38268610	38268611	chr18:38268611:C:G	rs9961471	C	G	c	Sox2_MA0143.3	22	0	-	0	0	.
chr18	38395034	38395035	chr18:38395035:T:C	rs1196599	T	C	T	Sox2_MA0143.3	-14	0	-	0	0	.
chr18	38413456	38413457	chr18:38413457:A:G	rs1196596	A	G	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr18	38580052	38580053	chr18:38580053:A:C	rs7227273	A	C	c	Sox2_MA0143.3	-17	0	+	0	0	.
chr18	38600721	38600722	chr18:38600722:A:G	rs28701674	A	G	A	Sox2_MA0143.3	-18	0	+	0	0	.
chr18	39193267	39193268	chr18:39193268:A:G	rs79859108	A	G	A	Sox2_MA0143.3	-2	0	-	0	0	.
chr18	39234345	39234346	chr18:39234346:C:T	rs35928062	C	T	t	Sox2_MA0143.3	25	0	+	0	0	.
chr18	39352246	39352247	chr18:39352247:T:A	rs35208442	T	A	T	Sox2_MA0143.3	8	0	-	0	0	.
chr18	39359307	39359308	chr18:39359308:G:T	rs12959513	G	T	G	Sox2_MA0143.3	8	0	-	0	0	.
chr18	39679872	39679873	chr18:39679873:A:G	rs478003	A	G	A	Sox2_MA0143.3	24	0	+	0	0	.
chr18	40040438	40040439	chr18:40040439:T:C	rs12606953	T	C	T	Sox2_MA0143.3	24	0	+	0	0	.
chr18	40180128	40180129	chr18:40180129:G:T	rs72899187	G	T	G	Sox2_MA0143.3	26	0	+	0	0	.
chr18	40216117	40216118	chr18:40216118:T:C	rs9952910	T	C	C	Sox2_MA0143.3	10	0	+	0	0	.
chr18	40360430	40360431	chr18:40360431:A:G	rs9952030	A	G	A	Sox2_MA0143.3	-6	0	-	0	0	.
chr18	40414159	40414160	chr18:40414160:T:C	rs9967462	T	C	T	Sox2_MA0143.3	23	0	+	0	0	.
chr18	40448013	40448014	chr18:40448014:G:C	rs16973405	G	C	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr18	40578167	40578168	chr18:40578168:A:C	rs12963111	A	C	A	Sox2_MA0143.3	4	1	-	9.800647049772198	2.8918922704569785	CCTTTGTT
chr18	41071266	41071267	chr18:41071267:T:C	rs72906870	T	C	T	Sox2_MA0143.3	-3	0	-	0	0	.
chr18	41075434	41075435	chr18:41075435:G:A	rs117381066	G	A	G	Sox2_MA0143.3	5	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr18	41333366	41333367	chr18:41333367:G:C	rs1496842	G	C	G	Sox2_MA0143.3	7	1	-	9.019595766176417	8.676919043985553	CCATTGTC
chr18	41361037	41361038	chr18:41361038:T:A	rs76917053	T	A	T	Sox2_MA0143.3	-7	0	+	0	0	.
chr18	41714700	41714701	chr18:41714701:A:G	rs17656030	A	G	A	Sox2_MA0143.3	15	0	-	0	0	.
chr18	41730705	41730706	chr18:41730706:T:C	rs117881495	T	C	T	Sox2_MA0143.3	4	1	+	9.800647049772198	2.8918922704569785	CCTTTGTT
chr18	41923335	41923336	chr18:41923336:C:A	rs73448558	C	A	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr18	41951173	41951174	chr18:41951174:A:G	rs1944967	A	G	G	Sox2_MA0143.3	25	0	-	0	0	.
chr18	42147317	42147318	chr18:42147318:G:T	rs533429	G	T	G	Sox2_MA0143.3	0	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr18	42193004	42193005	chr18:42193005:A:G	rs77369057	A	G	A	Sox2_MA0143.3	-15	0	+	0	0	.
chr18	42193015	42193016	chr18:42193016:C:G	rs12458631	C	G	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr18	42243045	42243046	chr18:42243046:G:T	rs6507465	G	T	T	Sox2_MA0143.3	25	0	+	0	0	.
chr18	42262684	42262685	chr18:42262685:C:A	rs72899317	C	A	c	Sox2_MA0143.3	0	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr18	42275209	42275210	chr18:42275210:A:C	rs1026596	A	C	C	Sox2_MA0143.3	23	0	-	0	0	.
chr18	42348902	42348903	chr18:42348903:C:T	rs77311365	C	T	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr18	42418071	42418072	chr18:42418072:A:C	rs437823	A	C	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr18	42437951	42437952	chr18:42437952:A:T	rs346212	A	T	A	Sox2_MA0143.3	4	1	-	9.800647049772198	2.8918922704569785	CCTTTGTT
chr18	42446521	42446522	chr18:42446522:G:A	rs140460751	G	A	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr18	42572097	42572098	chr18:42572098:A:G	rs9951066	A	G	A	Sox2_MA0143.3	-13	0	-	0	0	.
chr18	42615173	42615174	chr18:42615174:T:G	rs55843226	T	G	T	Sox2_MA0143.3	-6	0	+	0	0	.
chr18	43362830	43362831	chr18:43362831:A:G	rs8091251	A	G	A	Sox2_MA0143.3	18	0	+	0	0	.
chr18	43588216	43588217	chr18:43588217:A:T	rs2884606	A	T	C	Sox2_MA0143.3	19	0	-	0	0	.
chr18	44464623	44464624	chr18:44464624:C:T	rs9967515	C	T	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr18	44474909	44474910	chr18:44474910:C:T	rs56266408	C	T	T	Sox2_MA0143.3	9	0	-	0	0	.
chr18	44723160	44723161	chr18:44723161:C:G	rs186566478	C	G	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr18	44737738	44737739	chr18:44737739:C:T	rs9304312	C	T	C	Sox2_MA0143.3	21	0	+	0	0	.
chr18	44791104	44791105	chr18:44791105:A:G	rs1545723	A	G	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr18	44826830	44826831	chr18:44826831:A:C	chr18:44826831:A:C	A	C	A	Sox2_MA0143.3	-18	0	-	0	0	.
chr18	44938765	44938766	chr18:44938766:T:G	rs374199109	T	G	T	Sox2_MA0143.3	-5	0	-	0	0	.
chr18	45017056	45017057	chr18:45017057:T:C	rs547590311	T	C	T	Sox2_MA0143.3	25	0	+	0	0	.
chr18	45044243	45044244	chr18:45044244:A:T	rs3861813	A	T	T	Sox2_MA0143.3	18	0	+	0	0	.
chr18	45222415	45222416	chr18:45222416:G:A	rs12605615	G	A	A	Sox2_MA0143.3	-2	0	-	0	0	.
chr18	45233141	45233142	chr18:45233142:A:G	rs72904662	A	G	A	Sox2_MA0143.3	-2	0	-	0	0	.
chr18	45255444	45255445	chr18:45255445:G:A	rs193063495	G	A	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr18	45268575	45268576	chr18:45268576:A:C	rs8088202	A	C	A	Sox2_MA0143.3	24	0	+	0	0	.
chr18	45454402	45454403	chr18:45454403:G:A	rs6507619	G	A	G	Sox2_MA0143.3	-2	0	+	0	0	.
chr18	45469527	45469528	chr18:45469528:G:A	rs2852286	G	A	A	Sox2_MA0143.3	17	0	+	0	0	.
chr18	45564676	45564677	chr18:45564677:T:C	rs13382004	T	C	T	Sox2_MA0143.3	-17	0	-	0	0	.
chr18	45589379	45589380	chr18:45589380:A:C	rs2002108	A	C	a	Sox2_MA0143.3	-17	0	+	0	0	.
chr18	45660274	45660275	chr18:45660275:C:T	rs12051997	C	T	T	Sox2_MA0143.3	5	1	-	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr18	45660296	45660297	chr18:45660297:T:C	rs16978438	T	C	T	Sox2_MA0143.3	-17	0	-	0	0	.
chr18	45677695	45677696	chr18:45677696:C:T	rs116288805	C	T	c	Sox2_MA0143.3	-2	0	-	0	0	.
chr18	45691307	45691308	chr18:45691308:C:T	rs7244593	C	T	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr18	45703703	45703704	chr18:45703704:C:T	rs116838092	C	T	C	Sox2_MA0143.3	9	0	+	0	0	.
chr18	45736144	45736145	chr18:45736145:T:C	rs3819177	T	C	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr18	45755727	45755728	chr18:45755728:T:C	rs9953451	T	C	T	Sox2_MA0143.3	-18	0	-	0	0	.
chr18	45827834	45827835	chr18:45827835:T:C	rs73953903	T	C	T	Sox2_MA0143.3	20	0	-	0	0	.
chr18	45827869	45827870	chr18:45827870:T:C	rs146517261	T	C	T	Sox2_MA0143.3	-15	0	-	0	0	.
chr18	45836004	45836005	chr18:45836005:G:A	rs568806	G	A	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr18	45982135	45982136	chr18:45982136:C:A	rs590694	C	A	A	Sox2_MA0143.3	1	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr18	46182471	46182472	chr18:46182472:G:A	rs548533052	G	A	G	Sox2_MA0143.3	22	0	+	0	0	.
chr18	46261832	46261833	chr18:46261833:T:G	rs116083622	T	G	T	Sox2_MA0143.3	23	0	+	0	0	.
chr18	46261906	46261907	chr18:46261907:T:C	rs59904633	T	C	C	Sox2_MA0143.3	27	0	+	0	0	.
chr18	46264481	46264482	chr18:46264482:G:A	rs139249539	G	A	G	Sox2_MA0143.3	11	0	+	0	0	.
chr18	46291201	46291202	chr18:46291202:A:T	rs1108876	A	T	A	Sox2_MA0143.3	2	1	+	9.019595766176417	9.206767037375712	CCATTGTC
chr18	46359326	46359327	chr18:46359327:A:G	rs2364834	A	G	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr18	46534616	46534617	chr18:46534617:C:T	rs9967253	C	T	T	Sox2_MA0143.3	19	0	+	0	0	.
chr18	46538726	46538727	chr18:46538727:T:C	rs12956234	T	C	T	Sox2_MA0143.3	15	0	+	0	0	.
chr18	46548887	46548888	chr18:46548888:T:C	rs4133965	T	C	C	Sox2_MA0143.3	9	0	+	0	0	.
chr18	46623148	46623149	chr18:46623149:T:G	rs328188	T	G	T	Sox2_MA0143.3	6	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr18	46722167	46722168	chr18:46722168:G:T	rs77120706	G	T	G	Sox2_MA0143.3	26	0	-	0	0	.
chr18	46768856	46768857	chr18:46768857:A:T	rs16940060	A	T	T	Sox2_MA0143.3	3	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr18	46867502	46867503	chr18:46867503:T:C	rs149951315	T	C	T	Sox2_MA0143.3	-20	0	+	0	0	.
chr18	47142045	47142046	chr18:47142046:T:C	rs2635045	T	C	C	Sox2_MA0143.3	15	0	+	0	0	.
chr18	47307126	47307127	chr18:47307127:G:A	rs1434518	G	A	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr18	47345916	47345917	chr18:47345917:A:G	rs7238740	A	G	G	Sox2_MA0143.3	16	0	+	0	0	.
chr18	47409765	47409766	chr18:47409766:A:C	rs4539677	A	C	A	Sox2_MA0143.3	3	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr18	47413829	47413830	chr18:47413830:A:G	rs12457729	A	G	A	Sox2_MA0143.3	23	0	+	0	0	.
chr18	47452817	47452818	chr18:47452818:C:A	rs78580676	C	A	C	Sox2_MA0143.3	13	0	+	0	0	.
chr18	47521527	47521528	chr18:47521528:T:C	rs4939843	T	C	T	Sox2_MA0143.3	20	0	-	0	0	.
chr18	47601456	47601457	chr18:47601457:A:G	rs77197591	A	G	G	Sox2_MA0143.3	22	0	-	0	0	.
chr18	47605405	47605406	chr18:47605406:G:C	rs59718457	G	C	G	Sox2_MA0143.3	-11	0	+	0	0	.
chr18	47605428	47605429	chr18:47605429:T:C	rs11665292	T	C	T	Sox2_MA0143.3	12	0	+	0	0	.
chr18	47605440	47605441	chr18:47605441:G:C	rs11661889	G	C	G	Sox2_MA0143.3	24	0	+	0	0	.
chr18	47613559	47613560	chr18:47613560:T:G	rs9948649	T	G	G	Sox2_MA0143.3	11	0	+	0	0	.
chr18	47621411	47621412	chr18:47621412:C:T	rs59898253	C	T	C	Sox2_MA0143.3	27	0	+	0	0	.
chr18	47686851	47686852	chr18:47686852:C:T	rs12605401	C	T	C	Sox2_MA0143.3	12	0	-	0	0	.
chr18	47726709	47726710	chr18:47726710:C:T	rs2653624	C	T	T	Sox2_MA0143.3	-8	0	+	0	0	.
chr18	47771347	47771348	chr18:47771348:G:T	rs73441708	G	T	G	Sox2_MA0143.3	7	1	+	8.864090315184848	9.800647049772198	CCTTTGTG
chr18	47771770	47771771	chr18:47771771:G:A	rs80185804	G	A	G	Sox2_MA0143.3	0	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr18	47877111	47877112	chr18:47877112:T:C	rs1631576	T	C	t	Sox2_MA0143.3	3	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr18	47899284	47899285	chr18:47899285:C:A	rs17741998	C	A	C	Sox2_MA0143.3	24	0	-	0	0	.
chr18	47929967	47929968	chr18:47929968:G:A	rs75214334	G	A	G	Sox2_MA0143.3	10	0	-	0	0	.
chr18	47929993	47929994	chr18:47929994:A:G	rs80077982	A	G	a	Sox2_MA0143.3	-16	0	-	0	0	.
chr18	47987055	47987056	chr18:47987056:T:C	rs12959163	T	C	C	Sox2_MA0143.3	4	1	+	3.5547341015215945	-3.3540206777936254	CCTTTGTA
chr18	47996317	47996318	chr18:47996318:G:A	rs73445924	G	A	G	Sox2_MA0143.3	-3	0	-	0	0	.
chr18	48013433	48013434	chr18:48013434:C:T	rs138520536	C	T	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr18	48013434	48013435	chr18:48013435:G:A	rs7506168	G	A	A	Sox2_MA0143.3	-15	0	+	0	0	.
chr18	48019852	48019853	chr18:48019853:A:G	rs7228052	A	G	G	Sox2_MA0143.3	4	1	-	8.864090315184848	1.9553355358696274	CCTTTGTG
chr18	48059183	48059184	chr18:48059184:G:A	rs75215008	G	A	G	Sox2_MA0143.3	5	1	+	9.206767037375712	2.298012258060492	CCTTTGTC
chr18	48065553	48065554	chr18:48065554:G:A	rs139641438	G	A	G	Sox2_MA0143.3	27	0	-	0	0	.
chr18	48152969	48152970	chr18:48152970:T:A	rs35034982	T	A	T	Sox2_MA0143.3	10	0	-	0	0	.
chr18	48184506	48184507	chr18:48184507:C:A	rs12956321	C	A	C	Sox2_MA0143.3	27	0	+	0	0	.
chr18	48184889	48184890	chr18:48184890:A:G	rs140056598	A	G	A	Sox2_MA0143.3	-12	0	-	0	0	.
chr18	48201941	48201942	chr18:48201942:G:C	rs8097111	G	C	G	Sox2_MA0143.3	15	0	+	0	0	.
chr18	48226477	48226478	chr18:48226478:G:A	rs73433342	G	A	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr18	48252700	48252701	chr18:48252701:A:C	rs34153400	A	C	A	Sox2_MA0143.3	-6	0	-	0	0	.
chr18	48267422	48267423	chr18:48267423:G:A	rs772820430	G	A	T	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr18	48294237	48294238	chr18:48294238:A:G	rs7245161	A	G	A	Sox2_MA0143.3	4	1	-	8.676919043985553	1.7681642646703322	CCATTGTG
chr18	48304983	48304984	chr18:48304984:C:G	rs4940351	C	G	A	Sox2_MA0143.3	-4	0	+	0	0	.
chr18	48442044	48442045	chr18:48442045:G:T	rs7245195	G	T	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr18	48590356	48590357	chr18:48590357:C:T	rs111477910	C	T	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr18	48695898	48695899	chr18:48695899:G:T	rs73445589	G	T	G	Sox2_MA0143.3	8	0	+	0	0	.
chr18	48704479	48704480	chr18:48704480:C:T	rs79024316	C	T	C	Sox2_MA0143.3	13	0	-	0	0	.
chr18	48712280	48712281	chr18:48712281:C:T	rs113078829	C	T	T	Sox2_MA0143.3	12	0	-	0	0	.
chr18	48714339	48714340	chr18:48714340:A:C	rs9947954	A	C	C	Sox2_MA0143.3	6	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr18	48714364	48714365	chr18:48714365:C:T	rs76477629	C	T	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr18	48764928	48764929	chr18:48764929:A:G	rs75937431	A	G	A	Sox2_MA0143.3	11	0	-	0	0	.
chr18	48798737	48798738	chr18:48798738:T:G	rs4939813	T	G	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr18	48819201	48819202	chr18:48819202:C:G	rs183253351	C	G	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr18	48823423	48823424	chr18:48823424:T:C	rs4939818	T	C	T	Sox2_MA0143.3	-4	0	+	0	0	.
chr18	48824574	48824575	chr18:48824575:G:C	rs4939565	G	C	G	Sox2_MA0143.3	-2	0	+	0	0	.
chr18	48827213	48827214	chr18:48827214:C:T	rs9954676	C	T	T	Sox2_MA0143.3	-7	0	-	0	0	.
chr18	48923261	48923262	chr18:48923262:A:G	rs79704305	A	G	A	Sox2_MA0143.3	-16	0	+	0	0	.
chr18	48955770	48955771	chr18:48955771:C:T	rs2337144	C	T	T	Sox2_MA0143.3	-14	0	-	0	0	.
chr18	48972921	48972922	chr18:48972922:C:T	rs6507881	C	T	T	Sox2_MA0143.3	-16	0	+	0	0	.
chr18	48982973	48982974	chr18:48982974:T:G	rs537280604	T	G	T	Sox2_MA0143.3	-3	0	+	0	0	.
chr18	48983934	48983935	chr18:48983935:G:A	rs12960829	G	A	G	Sox2_MA0143.3	22	0	+	0	0	.
chr18	49061283	49061284	chr18:49061284:G:A	rs1787200	G	A	G	Sox2_MA0143.3	14	0	-	0	0	.
chr18	49167449	49167450	chr18:49167450:T:G	rs12970381	T	G	T	Sox2_MA0143.3	-8	0	+	0	0	.
chr18	49186419	49186420	chr18:49186420:C:T	rs1942998	C	T	T	Sox2_MA0143.3	-16	0	+	0	0	.
chr18	49186457	49186458	chr18:49186458:T:C	rs1942999	T	C	T	Sox2_MA0143.3	22	0	+	0	0	.
chr18	49273603	49273604	chr18:49273604:T:C	rs768627521	T	C	T	Sox2_MA0143.3	15	0	+	0	0	.
chr18	49431739	49431740	chr18:49431740:C:T	rs78292281	C	T	C	Sox2_MA0143.3	12	0	-	0	0	.
chr18	49519238	49519239	chr18:49519239:G:T	rs373957208	G	T	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr18	49571204	49571205	chr18:49571205:T:C	rs74538801	T	C	T	Sox2_MA0143.3	3	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr18	49625214	49625215	chr18:49625215:A:C	rs75855984	A	C	A	Sox2_MA0143.3	-2	0	-	0	0	.
chr18	49650034	49650035	chr18:49650035:G:A	rs7237871	G	A	a	Sox2_MA0143.3	17	0	-	0	0	.
chr18	49669367	49669368	chr18:49669368:G:A	rs146977559	G	A	G	Sox2_MA0143.3	12	0	-	0	0	.
chr18	49669394	49669395	chr18:49669395:G:A	rs35971015	G	A	A	Sox2_MA0143.3	-15	0	-	0	0	.
chr18	49674898	49674899	chr18:49674899:C:A	rs12454370	C	A	A	Sox2_MA0143.3	-19	0	-	0	0	.
chr18	49750327	49750328	chr18:49750328:A:G	rs11876667	A	G	G	Sox2_MA0143.3	26	0	+	0	0	.
chr18	49755093	49755094	chr18:49755094:T:G	rs8090922	T	G	G	Sox2_MA0143.3	24	0	+	0	0	.
chr18	49786622	49786623	chr18:49786623:A:G	rs542021	A	G	A	Sox2_MA0143.3	25	0	+	0	0	.
chr18	49813872	49813873	chr18:49813873:C:T	rs187089525	C	T	C	Sox2_MA0143.3	19	0	+	0	0	.
chr18	49833877	49833878	chr18:49833878:G:A	rs632263	G	A	A	Sox2_MA0143.3	8	0	+	0	0	.
chr18	49843416	49843417	chr18:49843417:G:A	rs143558993	G	A	G	Sox2_MA0143.3	27	0	-	0	0	.
chr18	49921487	49921488	chr18:49921488:A:C	rs116871032	A	C	A	Sox2_MA0143.3	7	1	-	9.613475778572903	8.676919043985553	CCATTGTT
chr18	49938638	49938639	chr18:49938639:A:C	rs1787598	A	C	C	Sox2_MA0143.3	14	0	+	0	0	.
chr18	49945921	49945922	chr18:49945922:C:T	rs2954238	C	T	T	Sox2_MA0143.3	0	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr18	49955518	49955519	chr18:49955519:A:G	chr18:49955519:A:G	A	G	A	Sox2_MA0143.3	14	0	-	0	0	.
chr18	49988962	49988963	chr18:49988963:A:G	rs57559574	A	G	G	Sox2_MA0143.3	-3	0	-	0	0	.
chr18	49988967	49988968	chr18:49988968:C:T	rs145958878	C	T	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr18	50089813	50089814	chr18:50089814:G:T	rs58233451	G	T	G	Sox2_MA0143.3	7	1	+	8.864090315184848	9.800647049772198	CCTTTGTG
chr18	50127542	50127543	chr18:50127543:G:A	rs11665048	G	A	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr18	50128667	50128668	chr18:50128668:G:A	rs116726484	G	A	G	Sox2_MA0143.3	0	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr18	50159068	50159069	chr18:50159069:G:C	rs183569864	G	C	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr18	50359857	50359858	chr18:50359858:A:G	rs6507987	A	G	A	Sox2_MA0143.3	8	0	+	0	0	.
chr18	50460883	50460884	chr18:50460884:T:C	rs8090515	T	C	C	Sox2_MA0143.3	16	0	-	0	0	.
chr18	50478370	50478371	chr18:50478371:G:T	rs2919790	G	T	T	Sox2_MA0143.3	-20	0	+	0	0	.
chr18	50479206	50479207	chr18:50479207:C:T	rs9950621	C	T	C	Sox2_MA0143.3	1	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr18	50492582	50492583	chr18:50492583:T:C	rs4452041	T	C	T	Sox2_MA0143.3	-5	0	+	0	0	.
chr18	50507579	50507580	chr18:50507580:C:T	rs78395866	C	T	C	Sox2_MA0143.3	0	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr18	50528191	50528192	chr18:50528192:G:A	rs79221070	G	A	G	Sox2_MA0143.3	9	0	-	0	0	.
chr18	50560209	50560210	chr18:50560210:C:T	rs190769648	C	T	c	Sox2_MA0143.3	-9	0	-	0	0	.
chr18	50589872	50589873	chr18:50589873:G:A	rs1437653	G	A	G	Sox2_MA0143.3	10	0	+	0	0	.
chr18	50662706	50662707	chr18:50662707:A:G	rs7240766	A	G	G	Sox2_MA0143.3	23	0	+	0	0	.
chr18	50675092	50675093	chr18:50675093:G:A	rs751114	G	A	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr18	50677289	50677290	chr18:50677290:G:A	rs8096347	G	A	G	Sox2_MA0143.3	0	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr18	50707214	50707215	chr18:50707215:G:A	rs10221320	G	A	G	Sox2_MA0143.3	13	0	-	0	0	.
chr18	50743147	50743148	chr18:50743148:T:A	rs192354167	T	A	T	Sox2_MA0143.3	-19	0	-	0	0	.
chr18	50752091	50752092	chr18:50752092:A:G	rs2019056	A	G	G	Sox2_MA0143.3	6	1	-	9.019595766176417	2.110840986861197	CCATTGTC
chr18	50808154	50808155	chr18:50808155:A:G	rs78337009	A	G	A	Sox2_MA0143.3	-19	0	+	0	0	.
chr18	50823012	50823013	chr18:50823013:G:A	rs9959521	G	A	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr18	51051411	51051412	chr18:51051412:G:C	rs7229678	G	C	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr18	51152615	51152616	chr18:51152616:A:C	rs16952856	A	C	A	Sox2_MA0143.3	20	0	+	0	0	.
chr18	51212766	51212767	chr18:51212767:C:T	rs11875629	C	T	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr18	51227855	51227856	chr18:51227856:G:A	rs992293288	G	A	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr18	51236298	51236299	chr18:51236299:C:T	rs147781775	C	T	C	Sox2_MA0143.3	17	0	-	0	0	.
chr18	51278373	51278374	chr18:51278374:G:T	rs73962908	G	T	G	Sox2_MA0143.3	20	0	-	0	0	.
chr18	51288104	51288105	chr18:51288105:C:A	rs11875194	C	A	C	Sox2_MA0143.3	12	0	+	0	0	.
chr18	51330955	51330956	chr18:51330956:A:G	rs17812359	A	G	A	Sox2_MA0143.3	3	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr18	51372138	51372139	chr18:51372139:T:C	rs17737656	T	C	T	Sox2_MA0143.3	-9	0	-	0	0	.
chr18	51491889	51491890	chr18:51491890:T:C	rs79410002	T	C	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr18	51624881	51624882	chr18:51624882:T:C	rs11660053	T	C	T	Sox2_MA0143.3	4	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr18	51739531	51739532	chr18:51739532:T:A	rs1394360	T	A	A	Sox2_MA0143.3	7	1	+	9.800647049772198	3.5547341015215945	CCTTTGTT
chr18	51953038	51953039	chr18:51953039:G:T	rs12709757	G	T	G	Sox2_MA0143.3	23	0	+	0	0	.
chr18	51953039	51953040	chr18:51953040:C:T	rs77134118	C	T	C	Sox2_MA0143.3	24	0	+	0	0	.
chr18	52108466	52108467	chr18:52108467:T:C	rs6508126	T	C	C	Sox2_MA0143.3	26	0	-	0	0	.
chr18	52387294	52387295	chr18:52387295:G:C	rs72916967	G	C	G	Sox2_MA0143.3	15	0	-	0	0	.
chr18	52440610	52440611	chr18:52440611:T:C	rs78820564	T	C	T	Sox2_MA0143.3	-20	0	-	0	0	.
chr18	52504749	52504750	chr18:52504750:G:T	rs1144050	G	T	T	Sox2_MA0143.3	-6	0	+	0	0	.
chr18	52684509	52684510	chr18:52684510:C:T	rs12962177	C	T	C	Sox2_MA0143.3	15	0	+	0	0	.
chr18	52720301	52720302	chr18:52720302:G:A	rs79654258	G	A	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr18	52748513	52748514	chr18:52748514:G:T	rs4452042	G	T	G	Sox2_MA0143.3	5	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr18	52759027	52759028	chr18:52759028:C:T	rs768048	C	T	T	Sox2_MA0143.3	1	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr18	52809542	52809543	chr18:52809543:G:T	rs12967780	G	T	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr18	52910572	52910573	chr18:52910573:T:A	rs137857033	T	A	T	Sox2_MA0143.3	-18	0	+	0	0	.
chr18	53021128	53021129	chr18:53021129:G:T	rs9807185	G	T	G	Sox2_MA0143.3	10	0	-	0	0	.
chr18	53021158	53021159	chr18:53021159:G:A	rs7504773	G	A	A	Sox2_MA0143.3	-20	0	-	0	0	.
chr18	54109322	54109323	chr18:54109323:C:T	rs150676756	C	T	T	Sox2_MA0143.3	-10	0	-	0	0	.
chr18	54139357	54139358	chr18:54139358:C:T	rs56374512	C	T	C	Sox2_MA0143.3	12	0	+	0	0	.
chr18	54148016	54148017	chr18:54148017:G:C	rs1259936	G	C	C	Sox2_MA0143.3	26	0	+	0	0	.
chr18	54223320	54223321	chr18:54223321:C:G	rs80242986	C	G	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr18	54247345	54247346	chr18:54247346:A:C	rs983129298	A	C	A	Sox2_MA0143.3	27	0	+	0	0	.
chr18	54254037	54254038	chr18:54254038:A:C	rs3017289	A	C	C	Sox2_MA0143.3	20	0	+	0	0	.
chr18	54387112	54387113	chr18:54387113:T:C	rs12967754	T	C	C	Sox2_MA0143.3	14	0	+	0	0	.
chr18	54388910	54388911	chr18:54388911:A:C	rs940310	A	C	A	Sox2_MA0143.3	10	0	-	0	0	.
chr18	54532064	54532065	chr18:54532065:G:A	rs12960472	G	A	G	Sox2_MA0143.3	8	0	-	0	0	.
chr18	54737177	54737178	chr18:54737178:A:G	rs28434600	A	G	A	Sox2_MA0143.3	-16	0	-	0	0	.
chr18	54790095	54790096	chr18:54790096:G:T	rs192666077	G	T	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr18	54790096	54790097	chr18:54790097:G:A	rs185591737	G	A	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr18	54950401	54950402	chr18:54950402:C:T	rs113770629	C	T	C	Sox2_MA0143.3	10	0	-	0	0	.
chr18	54958715	54958716	chr18:54958716:C:T	rs2282585	C	T	T	Sox2_MA0143.3	-18	0	+	0	0	.
chr18	55264264	55264265	chr18:55264265:C:T	chr18:55264265:C:T	C	T	C	Sox2_MA0143.3	15	0	-	0	0	.
chr18	55264531	55264532	chr18:55264532:A:T	rs1261134	A	T	T	Sox2_MA0143.3	13	0	-	0	0	.
chr18	55510438	55510439	chr18:55510439:T:C	rs9957668	T	C	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr18	55597111	55597112	chr18:55597112:A:G	rs596668	A	G	G	Sox2_MA0143.3	18	0	+	0	0	.
chr18	55774876	55774877	chr18:55774877:G:C	rs2306164	G	C	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr18	55774885	55774886	chr18:55774886:T:C	rs3816653	T	C	T	Sox2_MA0143.3	-4	0	+	0	0	.
chr18	55781727	55781728	chr18:55781728:T:C	rs1398349003	T	C	T	Sox2_MA0143.3	14	0	+	0	0	.
chr18	55867233	55867234	chr18:55867234:G:C	rs7234284	G	C	g	Sox2_MA0143.3	12	0	-	0	0	.
chr18	55919488	55919489	chr18:55919489:T:C	rs56154930	T	C	T	Sox2_MA0143.3	24	0	+	0	0	.
chr18	55999546	55999547	chr18:55999547:A:T	rs2646954	A	T	T	Sox2_MA0143.3	-20	0	-	0	0	.
chr18	56173113	56173114	chr18:56173114:C:A	rs1944347	C	A	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr18	56188628	56188629	chr18:56188629:A:G	rs1945734	A	G	A	Sox2_MA0143.3	2	1	-	9.800647049772198	3.494828071296623	CCTTTGTT
chr18	56190819	56190820	chr18:56190820:C:T	rs1789570	C	T	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr18	56323898	56323899	chr18:56323899:T:G	rs150822162	T	G	T	Sox2_MA0143.3	-20	0	-	0	0	.
chr18	56449862	56449863	chr18:56449863:T:C	rs12456800	T	C	C	Sox2_MA0143.3	2	1	-	9.019595766176417	2.900948058900136	CCATTGTC
chr18	56637495	56637496	chr18:56637496:G:A	rs8083576	G	A	G	Sox2_MA0143.3	25	0	-	0	0	.
chr18	57005016	57005017	chr18:57005017:A:G	rs188165002	A	G	A	Sox2_MA0143.3	8	0	+	0	0	.
chr18	57050540	57050541	chr18:57050541:C:G	rs75892687	C	G	C	Sox2_MA0143.3	9	0	+	0	0	.
chr18	57129083	57129084	chr18:57129084:C:A	rs7242741	C	A	C	Sox2_MA0143.3	26	0	-	0	0	.
chr18	57143849	57143850	chr18:57143850:T:G	rs4075822	T	G	G	Sox2_MA0143.3	6	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr18	57471204	57471205	chr18:57471205:A:G	rs652003	A	G	A	Sox2_MA0143.3	-3	0	+	0	0	.
chr18	57727975	57727976	chr18:57727976:G:A	rs566462135	G	A	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr18	57749262	57749263	chr18:57749263:C:A	rs952400	C	A	C	Sox2_MA0143.3	9	0	-	0	0	.
chr18	57819228	57819229	chr18:57819229:C:T	rs2663840	C	T	T	Sox2_MA0143.3	-17	0	-	0	0	.
chr18	57916207	57916208	chr18:57916208:C:T	rs8098212	C	T	C	Sox2_MA0143.3	7	1	+	9.206767037375712	9.800647049772198	CCTTTGTC
chr18	57916219	57916220	chr18:57916220:T:C	rs8085297	T	C	T	Sox2_MA0143.3	19	0	+	0	0	.
chr18	57981445	57981446	chr18:57981446:G:A	rs78073450	G	A	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr18	57992421	57992422	chr18:57992422:G:A	rs9955776	G	A	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr18	58053742	58053743	chr18:58053743:T:C	rs9989576	T	C	T	Sox2_MA0143.3	4	1	+	8.676919043985553	1.7681642646703322	CCATTGTG
chr18	58097454	58097455	chr18:58097455:T:G	rs115367567	T	G	T	Sox2_MA0143.3	25	0	-	0	0	.
chr18	58101762	58101763	chr18:58101763:T:C	rs1787771	T	C	C	Sox2_MA0143.3	2	1	+	9.206767037375712	2.900948058900136	CCTTTGTC
chr18	58104193	58104194	chr18:58104194:T:C	rs894800	T	C	T	Sox2_MA0143.3	21	0	-	0	0	.
chr18	58115172	58115173	chr18:58115173:C:T	rs149648095	C	T	C	Sox2_MA0143.3	15	0	+	0	0	.
chr18	58135459	58135460	chr18:58135460:G:C	rs111416974	G	C	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr18	58153988	58153989	chr18:58153989:C:G	rs77057770	C	G	c	Sox2_MA0143.3	19	0	+	0	0	.
chr18	58171770	58171771	chr18:58171771:T:G	rs8094453	T	G	T	Sox2_MA0143.3	17	0	-	0	0	.
chr18	58178075	58178076	chr18:58178076:T:C	rs77600165	T	C	T	Sox2_MA0143.3	-5	0	-	0	0	.
chr18	58201998	58201999	chr18:58201999:C:G	rs4940657	C	G	C	Sox2_MA0143.3	27	0	+	0	0	.
chr18	58277876	58277877	chr18:58277877:A:G	rs12605388	A	G	G	Sox2_MA0143.3	21	0	+	0	0	.
chr18	58316298	58316299	chr18:58316299:C:A	rs13339710	C	A	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr18	58385883	58385884	chr18:58385884:A:C	rs8087212	A	C	A	Sox2_MA0143.3	2	1	+	9.019595766176417	2.900948058900136	CCATTGTC
chr18	58388164	58388165	chr18:58388165:C:A	rs9956242	C	A	C	Sox2_MA0143.3	1	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr18	58389269	58389270	chr18:58389270:G:A	rs2277718	G	A	G	Sox2_MA0143.3	8	0	+	0	0	.
chr18	58442626	58442627	chr18:58442627:C:A	rs8099014	C	A	C	Sox2_MA0143.3	8	0	+	0	0	.
chr18	58466863	58466864	chr18:58466864:T:C	rs4940394	T	C	C	Sox2_MA0143.3	22	0	+	0	0	.
chr18	58482660	58482661	chr18:58482661:A:G	rs9948045	A	G	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr18	58482688	58482689	chr18:58482689:C:G	rs7231641	C	G	G	Sox2_MA0143.3	27	0	+	0	0	.
chr18	58505050	58505051	chr18:58505051:C:T	rs7240339	C	T	C	Sox2_MA0143.3	0	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr18	58591135	58591136	chr18:58591136:C:A	rs6566985	C	A	C	Sox2_MA0143.3	16	0	+	0	0	.
chr18	58612841	58612842	chr18:58612842:G:A	rs148296664	G	A	G	Sox2_MA0143.3	20	0	-	0	0	.
chr18	58618675	58618676	chr18:58618676:C:A	rs78478708	C	A	C	Sox2_MA0143.3	24	0	-	0	0	.
chr18	58640482	58640483	chr18:58640483:A:G	rs75745697	A	G	A	Sox2_MA0143.3	-7	0	+	0	0	.
chr18	58764387	58764388	chr18:58764388:C:A	chr18:58764388:C:A	C	A	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr18	58764422	58764423	chr18:58764423:G:A	rs138524789	G	A	G	Sox2_MA0143.3	12	0	+	0	0	.
chr18	58787924	58787925	chr18:58787925:G:A	rs4940755	G	A	A	Sox2_MA0143.3	-11	0	+	0	0	.
chr18	58789584	58789585	chr18:58789585:C:T	rs117952596	C	T	C	Sox2_MA0143.3	24	0	+	0	0	.
chr18	58805329	58805330	chr18:58805330:C:T	rs61572424	C	T	C	Sox2_MA0143.3	1	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr18	58814019	58814020	chr18:58814020:T:C	rs6567022	T	C	T	Sox2_MA0143.3	-13	0	+	0	0	.
chr18	58860306	58860307	chr18:58860307:C:T	rs907774356	C	T	C	Sox2_MA0143.3	9	0	-	0	0	.
chr18	58863664	58863665	chr18:58863665:G:A	rs541455978	G	A	G	Sox2_MA0143.3	22	0	-	0	0	.
chr18	58992031	58992032	chr18:58992032:G:A	rs17834781	G	A	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr18	58995827	58995828	chr18:58995828:C:T	rs114759273	C	T	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr18	59019568	59019569	chr18:59019569:G:A	rs17756883	G	A	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr18	59125192	59125193	chr18:59125193:G:A	rs11874338	G	A	A	Sox2_MA0143.3	7	1	+	8.864090315184848	3.5547341015215945	CCTTTGTG
chr18	59140721	59140722	chr18:59140722:A:G	rs114402393	A	G	A	Sox2_MA0143.3	-9	0	+	0	0	.
chr18	59165542	59165543	chr18:59165543:G:A	rs10503023	G	A	G	Sox2_MA0143.3	10	0	-	0	0	.
chr18	59276206	59276207	chr18:59276207:A:G	rs500959	A	G	A	Sox2_MA0143.3	-18	0	+	0	0	.
chr18	59276225	59276226	chr18:59276226:C:T	rs144215159	C	T	C	Sox2_MA0143.3	1	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr18	59276251	59276252	chr18:59276252:C:T	rs77759734	C	T	C	Sox2_MA0143.3	27	0	+	0	0	.
chr18	59373209	59373210	chr18:59373210:A:G	rs9948377	A	G	G	Sox2_MA0143.3	13	0	+	0	0	.
chr18	59392551	59392552	chr18:59392552:A:G	rs9953205	A	G	G	Sox2_MA0143.3	21	0	-	0	0	.
chr18	59458833	59458834	chr18:59458834:C:T	rs10469221	C	T	T	Sox2_MA0143.3	11	0	+	0	0	.
chr18	59467064	59467065	chr18:59467065:C:A	rs600795	C	A	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr18	59516852	59516853	chr18:59516853:C:G	rs143836636	C	G	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr18	59547733	59547734	chr18:59547734:T:C	rs76545143	T	C	T	Sox2_MA0143.3	-4	0	-	0	0	.
chr18	59547735	59547736	chr18:59547736:T:A	rs35324693	T	A	A	Sox2_MA0143.3	-6	0	-	0	0	.
chr18	59552313	59552314	chr18:59552314:T:C	rs7233289	T	C	T	Sox2_MA0143.3	-18	0	+	0	0	.
chr18	59552318	59552319	chr18:59552319:C:A	rs79493913	C	A	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr18	59606157	59606158	chr18:59606158:A:T	rs17780683	A	T	A	Sox2_MA0143.3	18	0	-	0	0	.
chr18	59640821	59640822	chr18:59640822:A:G	rs10445538	A	G	G	Sox2_MA0143.3	6	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr18	59731542	59731543	chr18:59731543:C:T	rs1629874	C	T	T	Sox2_MA0143.3	11	0	+	0	0	.
chr18	59788743	59788744	chr18:59788744:A:C	rs1791302	A	C	A	Sox2_MA0143.3	26	0	+	0	0	.
chr18	59810758	59810759	chr18:59810759:C:T	rs4940906	C	T	T	Sox2_MA0143.3	-7	0	+	0	0	.
chr18	59882134	59882135	chr18:59882135:C:T	rs74655143	C	T	C	Sox2_MA0143.3	15	0	+	0	0	.
chr18	59886351	59886352	chr18:59886352:A:G	rs6567127	A	G	G	Sox2_MA0143.3	25	0	-	0	0	.
chr18	59886413	59886414	chr18:59886414:T:C	rs9947122	T	C	T	Sox2_MA0143.3	-15	0	-	0	0	.
chr18	59897313	59897314	chr18:59897314:A:C	rs4349252	A	C	A	Sox2_MA0143.3	13	0	+	0	0	.
chr18	59899317	59899318	chr18:59899318:G:A	rs142239829	G	A	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr18	59909485	59909486	chr18:59909486:C:T	rs4127458	C	T	C	Sox2_MA0143.3	17	0	-	0	0	.
chr18	60189996	60189997	chr18:60189997:T:A	rs484094	T	A	T	Sox2_MA0143.3	-2	0	+	0	0	.
chr18	60202356	60202357	chr18:60202357:C:T	rs9947301	C	T	C	Sox2_MA0143.3	18	0	+	0	0	.
chr18	60258587	60258588	chr18:60258588:C:T	rs8086325	C	T	T	Sox2_MA0143.3	26	0	+	0	0	.
chr18	60319255	60319256	chr18:60319256:G:C	rs72990614	G	C	G	Sox2_MA0143.3	18	0	+	0	0	.
chr18	60466749	60466750	chr18:60466750:G:A	rs117899621	G	A	G	Sox2_MA0143.3	1	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr18	60691711	60691712	chr18:60691712:C:G	rs4940493	C	G	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr18	61065170	61065171	chr18:61065171:A:G	rs1030065142	A	G	A	Sox2_MA0143.3	-7	0	+	0	0	.
chr18	61583236	61583237	chr18:61583237:C:T	rs17068569	C	T	.	Sox2_MA0143.3	-6	0	+	0	0	.
chr18	61784990	61784991	chr18:61784991:C:A	rs10460121	C	A	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr18	61888830	61888831	chr18:61888831:C:T	rs146252723	C	T	C	Sox2_MA0143.3	22	0	-	0	0	.
chr18	61888839	61888840	chr18:61888840:T:C	rs138644071	T	C	T	Sox2_MA0143.3	13	0	-	0	0	.
chr18	61973055	61973056	chr18:61973056:G:A	rs72629877	G	A	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr18	62069645	62069646	chr18:62069646:A:G	rs12454220	A	G	A	Sox2_MA0143.3	16	0	-	0	0	.
chr18	62183452	62183453	chr18:62183453:T:C	rs17716559	T	C	C	Sox2_MA0143.3	4	1	+	3.5547341015215945	-3.3540206777936254	CCTTTGTA
chr18	62333191	62333192	chr18:62333192:C:T	rs7235256	C	T	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr18	62341700	62341701	chr18:62341701:T:A	rs11872145	T	A	T	Sox2_MA0143.3	6	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr18	62346884	62346885	chr18:62346885:G:A	rs17720953	G	A	G	Sox2_MA0143.3	15	0	+	0	0	.
chr18	62361528	62361529	chr18:62361529:G:A	rs8099222	G	A	G	Sox2_MA0143.3	8	0	-	0	0	.
chr18	62439252	62439253	chr18:62439253:A:G	rs7228522	A	G	G	Sox2_MA0143.3	12	0	+	0	0	.
chr18	62441803	62441804	chr18:62441804:A:G	rs8095034	A	G	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr18	62499678	62499679	chr18:62499679:G:A	rs56918794	G	A	G	Sox2_MA0143.3	18	0	-	0	0	.
chr18	62499903	62499904	chr18:62499904:G:A	rs11152347	G	A	G	Sox2_MA0143.3	20	0	+	0	0	.
chr18	62656020	62656021	chr18:62656021:T:C	rs306229	T	C	C	Sox2_MA0143.3	-12	0	-	0	0	.
chr18	62720370	62720371	chr18:62720371:G:A	rs34326632	G	A	A	Sox2_MA0143.3	12	0	-	0	0	.
chr18	62741311	62741312	chr18:62741312:A:C	rs1345895041	A	C	A	Sox2_MA0143.3	-15	0	-	0	0	.
chr18	62982194	62982195	chr18:62982195:A:C	rs12968799	A	C	A	Sox2_MA0143.3	9	0	+	0	0	.
chr18	63114366	63114367	chr18:63114367:T:C	rs2448806	T	C	T	Sox2_MA0143.3	-3	0	+	0	0	.
chr18	63140211	63140212	chr18:63140212:G:T	rs9962963	G	T	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr18	63240693	63240694	chr18:63240694:C:T	rs4941189	C	T	C	Sox2_MA0143.3	7	1	+	9.206767037375712	9.800647049772198	CCTTTGTC
chr18	63254175	63254176	chr18:63254176:G:C	rs74843171	G	C	G	Sox2_MA0143.3	26	0	-	0	0	.
chr18	63258927	63258928	chr18:63258928:A:C	rs12457893	A	C	A	Sox2_MA0143.3	9	0	+	0	0	.
chr18	63311352	63311353	chr18:63311353:G:T	rs12458289	G	T	G	Sox2_MA0143.3	9	0	+	0	0	.
chr18	63344589	63344590	chr18:63344590:G:T	rs35585697	G	T	G	Sox2_MA0143.3	12	0	-	0	0	.
chr18	63365906	63365907	chr18:63365907:C:T	rs553251378	C	T	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr18	63410931	63410932	chr18:63410932:G:T	rs1019704875	G	T	G	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr18	63765964	63765965	chr18:63765965:G:A	rs8090034	G	A	A	Sox2_MA0143.3	-18	0	+	0	0	.
chr18	63891421	63891422	chr18:63891422:C:G	rs6095	C	G	C	Sox2_MA0143.3	26	0	-	0	0	.
chr18	63997866	63997867	chr18:63997867:G:A	rs188632421	G	A	G	Sox2_MA0143.3	0	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr18	64244683	64244684	chr18:64244684:C:T	rs58575680	C	T	T	Sox2_MA0143.3	7	1	-	8.676919043985553	3.3675628303222993	CCATTGTG
chr18	64244703	64244704	chr18:64244704:A:G	rs57587542	A	G	A	Sox2_MA0143.3	-13	0	-	0	0	.
chr18	64271394	64271395	chr18:64271395:A:C	rs73470792	A	C	A	Sox2_MA0143.3	12	0	-	0	0	.
chr18	64271426	64271427	chr18:64271427:G:A	rs78130106	G	A	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr18	64437321	64437322	chr18:64437322:G:A	rs2959470	G	A	A	Sox2_MA0143.3	-10	0	-	0	0	.
chr18	64664137	64664138	chr18:64664138:A:G	rs11151133	A	G	A	Sox2_MA0143.3	-16	0	-	0	0	.
chr18	64754295	64754296	chr18:64754296:C:T	rs11662726	C	T	C	Sox2_MA0143.3	22	0	-	0	0	.
chr18	64846991	64846992	chr18:64846992:C:G	rs1660261	C	G	G	Sox2_MA0143.3	16	0	+	0	0	.
chr18	65122396	65122397	chr18:65122397:C:T	rs1279359218	C	T	C	Sox2_MA0143.3	24	0	+	0	0	.
chr18	65226633	65226634	chr18:65226634:T:C	rs17179730	T	C	T	Sox2_MA0143.3	-15	0	-	0	0	.
chr18	65280078	65280079	chr18:65280079:A:G	rs682165	A	G	A	Sox2_MA0143.3	2	1	+	9.613475778572903	3.494828071296623	CCATTGTT
chr18	65280094	65280095	chr18:65280095:A:G	rs577092165	A	G	A	Sox2_MA0143.3	18	0	+	0	0	.
chr18	65490995	65490996	chr18:65490996:T:C	rs10871586	T	C	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr18	65529200	65529201	chr18:65529201:C:T	rs78175944	C	T	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr18	65605743	65605744	chr18:65605744:T:C	rs1018856792	T	C	-	Sox2_MA0143.3	10	0	+	0	0	.
chr18	65671958	65671959	chr18:65671959:G:A	rs9748337	G	A	G	Sox2_MA0143.3	24	0	-	0	0	.
chr18	65725659	65725660	chr18:65725660:C:A	rs17781554	C	A	A	Sox2_MA0143.3	13	0	+	0	0	.
chr18	65831378	65831379	chr18:65831379:A:T	rs72944014	A	T	A	Sox2_MA0143.3	-2	0	-	0	0	.
chr18	66055908	66055909	chr18:66055909:A:C	rs8086037	A	C	A	Sox2_MA0143.3	-18	0	-	0	0	.
chr18	66410978	66410979	chr18:66410979:T:A	rs12957941	T	A	T	Sox2_MA0143.3	23	0	-	0	0	.
chr18	66616469	66616470	chr18:66616470:G:A	rs146642675	G	A	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr18	66616471	66616472	chr18:66616472:C:T	rs2155896	C	T	T	Sox2_MA0143.3	-17	0	+	0	0	.
chr18	66773448	66773449	chr18:66773449:C:G	rs9962564	C	G	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr18	66773487	66773488	chr18:66773488:T:G	rs78985669	T	G	T	Sox2_MA0143.3	25	0	+	0	0	.
chr18	67151638	67151639	chr18:67151639:C:A	rs113059467	C	A	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr18	67232544	67232545	chr18:67232545:A:G	rs9954929	A	G	G	Sox2_MA0143.3	15	0	-	0	0	.
chr18	67232572	67232573	chr18:67232573:T:C	rs74550872	T	C	T	Sox2_MA0143.3	-13	0	-	0	0	.
chr18	67305727	67305728	chr18:67305728:T:C	rs11661587	T	C	T	Sox2_MA0143.3	-19	0	-	0	0	.
chr18	67609917	67609918	chr18:67609918:C:T	rs12965858	C	T	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr18	67718496	67718497	chr18:67718497:A:G	rs150125641	A	G	A	Sox2_MA0143.3	2	1	+	9.019595766176417	2.900948058900136	CCATTGTC
chr18	67731938	67731939	chr18:67731939:A:G	rs55754359	A	G	G	Sox2_MA0143.3	2	1	+	8.676919043985553	2.5582713367092715	CCATTGTG
chr18	67894637	67894638	chr18:67894638:A:G	rs17773289	A	G	A	Sox2_MA0143.3	-12	0	-	0	0	.
chr18	67980405	67980406	chr18:67980406:T:C	rs7234758	T	C	T	Sox2_MA0143.3	7	1	-	3.5547341015215945	8.864090315184848	CCTTTGTA
chr18	68051957	68051958	chr18:68051958:C:T	rs66495142	C	T	C	Sox2_MA0143.3	24	0	+	0	0	.
chr18	68083151	68083152	chr18:68083152:A:G	rs8093264	A	G	a	Sox2_MA0143.3	14	0	+	0	0	.
chr18	68121476	68121477	chr18:68121477:A:C	rs936299717	A	C	A	Sox2_MA0143.3	-16	0	-	0	0	.
chr18	68125370	68125371	chr18:68125371:G:A	rs17200448	G	A	G	Sox2_MA0143.3	1	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr18	68178250	68178251	chr18:68178251:A:C	rs554039439	A	C	A	Sox2_MA0143.3	22	0	-	0	0	.
chr18	68178264	68178265	chr18:68178265:T:C	rs17792178	T	C	T	Sox2_MA0143.3	8	0	-	0	0	.
chr18	68377127	68377128	chr18:68377128:A:G	rs9957744	A	G	A	Sox2_MA0143.3	-17	0	+	0	0	.
chr18	68418811	68418812	chr18:68418812:T:G	rs1554220	T	G	T	Sox2_MA0143.3	3	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr18	69021086	69021087	chr18:69021087:A:C	rs55744737	A	C	A	Sox2_MA0143.3	4	1	-	8.864090315184848	1.9553355358696274	CCTTTGTG
chr18	69216134	69216135	chr18:69216135:C:T	rs583991	C	T	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr18	69397074	69397075	chr18:69397075:T:C	rs4524027	T	C	T	Sox2_MA0143.3	21	0	+	0	0	.
chr18	69494895	69494896	chr18:69494896:A:G	rs189264897	A	G	a	Sox2_MA0143.3	27	0	+	0	0	.
chr18	69534680	69534681	chr18:69534681:T:C	rs1442669	T	C	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr18	69621655	69621656	chr18:69621656:A:G	rs9949417	A	G	A	Sox2_MA0143.3	-13	0	-	0	0	.
chr18	69628704	69628705	chr18:69628705:C:A	rs114661663	C	A	C	Sox2_MA0143.3	1	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr18	69655917	69655918	chr18:69655918:G:A	rs9954832	G	A	G	Sox2_MA0143.3	23	0	-	0	0	.
chr18	69659315	69659316	chr18:69659316:A:G	rs75749156	A	G	A	Sox2_MA0143.3	25	0	-	0	0	.
chr18	69753356	69753357	chr18:69753357:T:C	rs12953961	T	C	C	Sox2_MA0143.3	21	0	-	0	0	.
chr18	70047058	70047059	chr18:70047059:A:G	rs17082007	A	G	A	Sox2_MA0143.3	18	0	-	0	0	.
chr18	70047070	70047071	chr18:70047071:A:C	rs150521764	A	C	A	Sox2_MA0143.3	6	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr18	70047086	70047087	chr18:70047087:A:G	rs2043501	A	G	A	Sox2_MA0143.3	-10	0	-	0	0	.
chr18	70219836	70219837	chr18:70219837:T:C	rs10871666	T	C	T	Sox2_MA0143.3	-4	0	+	0	0	.
chr18	70243300	70243301	chr18:70243301:C:T	rs17082295	C	T	C	Sox2_MA0143.3	26	0	+	0	0	.
chr18	70243379	70243380	chr18:70243380:T:C	rs184092860	T	C	T	Sox2_MA0143.3	2	1	-	9.019595766176417	2.900948058900136	CCATTGTC
chr18	70256365	70256366	chr18:70256366:C:G	rs8089197	C	G	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr18	70304461	70304462	chr18:70304462:C:G	rs9950023	C	G	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr18	70353286	70353287	chr18:70353287:A:G	rs8089922	A	G	A	Sox2_MA0143.3	-11	0	+	0	0	.
chr18	70361268	70361269	chr18:70361269:T:C	rs2581712	T	C	T	Sox2_MA0143.3	4	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr18	70361279	70361280	chr18:70361280:G:A	rs2711402	G	A	G	Sox2_MA0143.3	15	0	+	0	0	.
chr18	70381972	70381973	chr18:70381973:T:C	rs2581680	T	C	t	Sox2_MA0143.3	-2	0	+	0	0	.
chr18	71037041	71037042	chr18:71037042:A:G	rs11660978	A	G	A	Sox2_MA0143.3	-4	0	-	0	0	.
chr18	71238118	71238119	chr18:71238119:T:A	rs8095484	T	A	T	Sox2_MA0143.3	17	0	+	0	0	.
chr18	71377357	71377358	chr18:71377358:C:A	rs12957838	C	A	C	Sox2_MA0143.3	21	0	+	0	0	.
chr18	71583250	71583251	chr18:71583251:A:T	rs1942361	A	T	A	Sox2_MA0143.3	22	0	+	0	0	.
chr18	72375398	72375399	chr18:72375399:G:A	rs7506364	G	A	G	Sox2_MA0143.3	1	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr18	72400968	72400969	chr18:72400969:A:G	rs9956455	A	G	A	Sox2_MA0143.3	8	0	-	0	0	.
chr18	72540104	72540105	chr18:72540105:A:G	rs658995	A	G	G	Sox2_MA0143.3	15	0	+	0	0	.
chr18	72752187	72752188	chr18:72752188:T:A	rs72962352	T	A	T	Sox2_MA0143.3	18	0	-	0	0	.
chr18	72755512	72755513	chr18:72755513:C:G	rs11877047	C	G	C	Sox2_MA0143.3	14	0	+	0	0	.
chr18	72768685	72768686	chr18:72768686:C:T	rs12968355	C	T	T	Sox2_MA0143.3	5	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr18	72942751	72942752	chr18:72942752:T:C	rs12959769	T	C	C	Sox2_MA0143.3	24	0	-	0	0	.
chr18	73118674	73118675	chr18:73118675:A:G	rs35558304	A	G	A	Sox2_MA0143.3	-20	0	+	0	0	.
chr18	73355407	73355408	chr18:73355408:A:G	rs8084151	A	G	A	Sox2_MA0143.3	-8	0	-	0	0	.
chr18	73403599	73403600	chr18:73403600:T:C	rs9947437	T	C	T	Sox2_MA0143.3	-1	0	+	0	0	.
chr18	73403620	73403621	chr18:73403621:T:C	rs9947510	T	C	T	Sox2_MA0143.3	20	0	+	0	0	.
chr18	73406986	73406987	chr18:73406987:C:T	rs4371252	C	T	C	Sox2_MA0143.3	25	0	-	0	0	.
chr18	73406996	73406997	chr18:73406997:G:T	rs4497785	G	T	T	Sox2_MA0143.3	15	0	-	0	0	.
chr18	73509540	73509541	chr18:73509541:C:T	rs55986066	C	T	C	Sox2_MA0143.3	5	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr18	73509611	73509612	chr18:73509612:T:C	rs9646591	T	C	T	Sox2_MA0143.3	-13	0	-	0	0	.
chr18	73615885	73615886	chr18:73615886:T:C	rs4892118	T	C	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr18	73661553	73661554	chr18:73661554:C:T	rs9949886	C	T	T	Sox2_MA0143.3	24	0	+	0	0	.
chr18	73663612	73663613	chr18:73663613:C:G	rs17830956	C	G	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr18	73739300	73739301	chr18:73739301:T:C	rs17766128	T	C	T	Sox2_MA0143.3	-2	0	+	0	0	.
chr18	73745425	73745426	chr18:73745426:T:A	rs12454955	T	A	T	Sox2_MA0143.3	-19	0	-	0	0	.
chr18	73759689	73759690	chr18:73759690:C:G	rs117215625	C	G	C	Sox2_MA0143.3	1	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr18	73910173	73910174	chr18:73910174:G:A	rs2163311	G	A	A	Sox2_MA0143.3	-12	0	-	0	0	.
chr18	73926943	73926944	chr18:73926944:C:T	rs58805143	C	T	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr18	73996502	73996503	chr18:73996503:A:C	rs2702581	A	C	A	Sox2_MA0143.3	26	0	-	0	0	.
chr18	74002182	74002183	chr18:74002183:T:C	rs2702616	T	C	C	Sox2_MA0143.3	3	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr18	74197857	74197858	chr18:74197858:C:T	rs948798	C	T	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr18	74256487	74256488	chr18:74256488:A:G	rs8091176	A	G	A	Sox2_MA0143.3	17	0	-	0	0	.
chr18	74256490	74256491	chr18:74256491:G:C	rs78999753	G	C	G	Sox2_MA0143.3	14	0	-	0	0	.
chr18	74257265	74257266	chr18:74257266:G:A	rs8096066	G	A	G	Sox2_MA0143.3	24	0	+	0	0	.
chr18	74327011	74327012	chr18:74327012:C:T	rs11659327	C	T	C	Sox2_MA0143.3	18	0	-	0	0	.
chr18	74370098	74370099	chr18:74370099:T:C	rs9319902	T	C	C	Sox2_MA0143.3	18	0	+	0	0	.
chr18	74374330	74374331	chr18:74374331:A:C	rs72967845	A	C	A	Sox2_MA0143.3	-5	0	-	0	0	.
chr18	74374345	74374346	chr18:74374346:G:A	rs12962451	G	A	g	Sox2_MA0143.3	-20	0	-	0	0	.
chr18	74389890	74389891	chr18:74389891:T:C	rs12959382	T	C	T	Sox2_MA0143.3	-10	0	-	0	0	.
chr18	74395162	74395163	chr18:74395163:T:G	rs17089188	T	G	G	Sox2_MA0143.3	6	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr18	74437278	74437279	chr18:74437279:G:A	rs17809342	G	A	G	Sox2_MA0143.3	1	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr18	74448501	74448502	chr18:74448502:T:C	rs11661135	T	C	T	Sox2_MA0143.3	-18	0	-	0	0	.
chr18	74480562	74480563	chr18:74480563:C:T	rs77368100	C	T	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr18	74565524	74565525	chr18:74565525:T:C	rs7506936	T	C	T	Sox2_MA0143.3	14	0	-	0	0	.
chr18	74594805	74594806	chr18:74594806:T:C	rs7506112	T	C	T	Sox2_MA0143.3	11	0	-	0	0	.
chr18	74794237	74794238	chr18:74794238:G:A	rs17243808	G	A	A	Sox2_MA0143.3	-18	0	+	0	0	.
chr18	74804587	74804588	chr18:74804588:T:C	rs17244039	T	C	T	Sox2_MA0143.3	-10	0	-	0	0	.
chr18	74941008	74941009	chr18:74941009:G:A	rs2930547	G	A	G	Sox2_MA0143.3	16	0	+	0	0	.
chr18	74976381	74976382	chr18:74976382:G:A	rs62089927	G	A	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr18	75075312	75075313	chr18:75075313:C:T	rs41416645	C	T	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr18	75083722	75083723	chr18:75083723:T:G	rs976665	T	G	G	Sox2_MA0143.3	24	0	+	0	0	.
chr18	75087441	75087442	chr18:75087442:C:T	rs183369856	C	T	C	Sox2_MA0143.3	10	0	+	0	0	.
chr18	75107446	75107447	chr18:75107447:G:A	rs10871567	G	A	A	Sox2_MA0143.3	21	0	-	0	0	.
chr18	75109207	75109208	chr18:75109208:C:T	rs17056358	C	T	C	Sox2_MA0143.3	1	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr18	75123358	75123359	chr18:75123359:G:A	rs8096959	G	A	A	Sox2_MA0143.3	-10	0	-	0	0	.
chr18	75125458	75125459	chr18:75125459:A:G	rs117686931	A	G	A	Sox2_MA0143.3	17	0	-	0	0	.
chr18	75127883	75127884	chr18:75127884:C:T	rs117559767	C	T	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr18	75168200	75168201	chr18:75168201:G:C	rs146172234	G	C	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr18	75171067	75171068	chr18:75171068:G:A	rs76673849	G	A	G	Sox2_MA0143.3	24	0	+	0	0	.
chr18	75173274	75173275	chr18:75173275:T:C	rs182942663	T	C	T	Sox2_MA0143.3	10	0	-	0	0	.
chr18	75183631	75183632	chr18:75183632:C:T	rs143219378	C	T	c	Sox2_MA0143.3	16	0	+	0	0	.
chr18	75214122	75214123	chr18:75214123:G:A	rs2639993	G	A	A	Sox2_MA0143.3	-6	0	+	0	0	.
chr18	75214155	75214156	chr18:75214156:C:T	rs149591960	C	T	C	Sox2_MA0143.3	27	0	+	0	0	.
chr18	75353203	75353204	chr18:75353204:G:T	rs11877033	G	T	T	Sox2_MA0143.3	20	0	-	0	0	.
chr18	75479132	75479133	chr18:75479133:C:T	rs999058640	C	T	C	Sox2_MA0143.3	7	1	+	9.019595766176417	9.613475778572903	CCATTGTC
chr18	75502792	75502793	chr18:75502793:G:A	rs118015022	G	A	G	Sox2_MA0143.3	9	0	-	0	0	.
chr18	75752918	75752919	chr18:75752919:T:C	rs8098310	T	C	T	Sox2_MA0143.3	-5	0	+	0	0	.
chr18	75753212	75753213	chr18:75753213:G:A	rs2105738	G	A	G	Sox2_MA0143.3	16	0	-	0	0	.
chr18	76218568	76218569	chr18:76218569:G:T	rs143045664	G	T	G	Sox2_MA0143.3	13	0	-	0	0	.
chr18	76398980	76398981	chr18:76398981:C:T	rs772978784	C	T	C	Sox2_MA0143.3	10	0	-	0	0	.
chr18	76451078	76451079	chr18:76451079:G:A	rs758215442	G	A	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr18	76491460	76491461	chr18:76491461:T:C	rs867088192	T	C	T	Sox2_MA0143.3	9	0	+	0	0	.
chr18	76492397	76492398	chr18:76492398:G:C	rs35399883	G	C	G	Sox2_MA0143.3	9	0	+	0	0	.
chr18	76493258	76493259	chr18:76493259:G:A	chr18:76493259:G:A	G	A	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr18	76527816	76527817	chr18:76527817:C:T	rs80245430	C	T	C	Sox2_MA0143.3	1	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr18	76554936	76554937	chr18:76554937:C:T	rs77855611	C	T	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr18	76554943	76554944	chr18:76554944:G:C	rs369913884	G	C	G	Sox2_MA0143.3	-3	0	+	0	0	.
chr18	76570044	76570045	chr18:76570045:G:A	rs77974419	G	A	G	Sox2_MA0143.3	27	0	+	0	0	.
chr18	76570315	76570316	chr18:76570316:C:A	rs8087677	C	A	C	Sox2_MA0143.3	8	0	+	0	0	.
chr18	76590885	76590886	chr18:76590886:C:T	rs8086005	C	T	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr18	76603327	76603328	chr18:76603328:C:T	rs117674758	C	T	g	Sox2_MA0143.3	18	0	+	0	0	.
chr18	76613953	76613954	chr18:76613954:C:G	rs73978415	C	G	g	Sox2_MA0143.3	23	0	-	0	0	.
chr18	76613954	76613955	chr18:76613955:G:A	rs73978416	G	A	g	Sox2_MA0143.3	22	0	-	0	0	.
chr18	76731184	76731185	chr18:76731185:C:G	rs61639880	C	G	c	Sox2_MA0143.3	7	1	+	9.019595766176417	8.676919043985553	CCATTGTC
chr18	76752645	76752646	chr18:76752646:C:T	rs7239085	C	T	T	Sox2_MA0143.3	-19	0	+	0	0	.
chr18	76823363	76823364	chr18:76823364:C:T	rs149068973	C	T	-	Sox2_MA0143.3	-9	0	+	0	0	.
chr18	76823371	76823372	chr18:76823372:G:A	rs9962905	G	A	-	Sox2_MA0143.3	-1	0	+	0	0	.
chr18	76870915	76870916	chr18:76870916:A:G	rs146139709	A	G	A	Sox2_MA0143.3	-11	0	-	0	0	.
chr18	76914598	76914599	chr18:76914599:C:T	rs890050444	C	T	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr18	76979994	76979995	chr18:76979995:T:C	rs1048871	T	C	T	Sox2_MA0143.3	-19	0	-	0	0	.
chr18	77002326	77002327	chr18:77002327:G:A	rs3794846	G	A	G	Sox2_MA0143.3	8	0	+	0	0	.
chr18	77042673	77042674	chr18:77042674:G:C	rs533895113	G	C	G	Sox2_MA0143.3	18	0	-	0	0	.
chr18	77061855	77061856	chr18:77061856:A:T	rs79091172	A	T	A	Sox2_MA0143.3	-18	0	+	0	0	.
chr18	77061896	77061897	chr18:77061897:T:C	rs12458282	T	C	C	Sox2_MA0143.3	23	0	+	0	0	.
chr18	77069089	77069090	chr18:77069090:C:G	rs570526272	C	G	C	Sox2_MA0143.3	13	0	+	0	0	.
chr18	77074266	77074267	chr18:77074267:A:G	rs557659	A	G	G	Sox2_MA0143.3	4	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr18	77089134	77089135	chr18:77089135:G:C	rs1667913	G	C	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr18	77103898	77103899	chr18:77103899:T:C	rs4890893	T	C	T	Sox2_MA0143.3	24	0	-	0	0	.
chr18	77103914	77103915	chr18:77103915:G:A	rs80214540	G	A	A	Sox2_MA0143.3	8	0	-	0	0	.
chr18	77132559	77132560	chr18:77132560:C:G	rs531524833	C	G	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr18	77135990	77135991	chr18:77135991:G:A	rs58719262	G	A	G	Sox2_MA0143.3	9	0	+	0	0	.
chr18	77141970	77141971	chr18:77141971:T:G	rs1667957	T	G	T	Sox2_MA0143.3	-9	0	-	0	0	.
chr18	77645316	77645317	chr18:77645317:T:C	rs72982552	T	C	T	Sox2_MA0143.3	-5	0	-	0	0	.
chr18	77677115	77677116	chr18:77677116:T:C	rs56387381	T	C	T	Sox2_MA0143.3	16	0	+	0	0	.
chr18	77720429	77720430	chr18:77720430:C:T	rs1024116	C	T	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr18	77936655	77936656	chr18:77936656:C:T	rs8099653	C	T	C	Sox2_MA0143.3	27	0	+	0	0	.
chr18	78016142	78016143	chr18:78016143:T:C	rs6506835	T	C	C	Sox2_MA0143.3	24	0	-	0	0	.
chr18	78071800	78071801	chr18:78071801:T:A	rs113544972	T	A	T	Sox2_MA0143.3	-13	0	+	0	0	.
chr18	78071847	78071848	chr18:78071848:C:T	rs4799153	C	T	T	Sox2_MA0143.3	20	0	+	0	0	.
chr18	78124210	78124211	chr18:78124211:C:T	rs12953766	C	T	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr18	78124224	78124225	chr18:78124225:A:G	rs12960970	A	G	A	Sox2_MA0143.3	13	0	+	0	0	.
chr18	78365726	78365727	chr18:78365727:T:A	rs73487885	T	A	T	Sox2_MA0143.3	11	0	+	0	0	.
chr18	78403635	78403636	chr18:78403636:C:T	rs28618247	C	T	C	Sox2_MA0143.3	19	0	-	0	0	.
chr18	78510348	78510349	chr18:78510349:C:T	rs185750	C	T	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr18	78574421	78574422	chr18:78574422:A:G	rs56218205	A	G	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr18	78623079	78623080	chr18:78623080:G:A	rs116880165	G	A	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr18	78649048	78649049	chr18:78649049:G:A	rs4799186	G	A	g	Sox2_MA0143.3	14	0	+	0	0	.
chr18	78658198	78658199	chr18:78658199:T:C	rs2931068	T	C	C	Sox2_MA0143.3	17	0	+	0	0	.
chr18	78675048	78675049	chr18:78675049:T:C	rs12604399	T	C	T	Sox2_MA0143.3	3	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr18	78683801	78683802	chr18:78683802:C:T	rs77305355	C	T	C	Sox2_MA0143.3	26	0	+	0	0	.
chr18	78689301	78689302	chr18:78689302:C:T	rs12970956	C	T	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr18	78717890	78717891	chr18:78717891:C:T	chr18:78717891:C:T	C	T	C	Sox2_MA0143.3	16	0	-	0	0	.
chr18	78731787	78731788	chr18:78731788:G:A	rs150020616	G	A	G	Sox2_MA0143.3	24	0	-	0	0	.
chr18	78751717	78751718	chr18:78751718:G:A	rs13381083	G	A	G	Sox2_MA0143.3	10	0	+	0	0	.
chr18	78767269	78767270	chr18:78767270:G:A	rs8097632	G	A	A	Sox2_MA0143.3	17	0	-	0	0	.
chr18	78800024	78800025	chr18:78800025:T:C	rs4799206	T	C	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr18	78820310	78820311	chr18:78820311:A:G	rs73971293	A	G	A	Sox2_MA0143.3	22	0	-	0	0	.
chr18	78820334	78820335	chr18:78820335:C:T	rs111384286	C	T	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr18	78861001	78861002	chr18:78861002:G:A	rs113417939	G	A	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr18	78928156	78928157	chr18:78928157:A:G	rs78206508	A	G	A	Sox2_MA0143.3	-9	0	+	0	0	.
chr18	78935777	78935778	chr18:78935778:A:G	rs557820855	A	G	A	Sox2_MA0143.3	3	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr18	78949854	78949855	chr18:78949855:G:A	rs147410741	G	A	G	Sox2_MA0143.3	11	0	-	0	0	.
chr18	78959667	78959668	chr18:78959668:G:A	rs75973670	G	A	G	Sox2_MA0143.3	8	0	+	0	0	.
chr18	78979695	78979696	chr18:78979696:G:A	rs185531661	G	A	-	Sox2_MA0143.3	0	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr18	79157854	79157855	chr18:79157855:A:G	rs7504736	A	G	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr18	79312122	79312123	chr18:79312123:A:G	rs4798900	A	G	G	Sox2_MA0143.3	3	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr18	79323689	79323690	chr18:79323690:T:A	rs12456527	T	A	T	Sox2_MA0143.3	22	0	+	0	0	.
chr18	79372005	79372006	chr18:79372006:G:T	rs35755749	G	T	G	Sox2_MA0143.3	14	0	-	0	0	.
chr18	79372015	79372016	chr18:79372016:A:G	rs7226407	A	G	G	Sox2_MA0143.3	4	1	-	9.800647049772198	2.8918922704569785	CCTTTGTT
chr18	79387471	79387472	chr18:79387472:C:T	rs9954562	C	T	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr18	79479774	79479775	chr18:79479775:G:A	rs117383241	G	A	G	Sox2_MA0143.3	-2	0	+	0	0	.
chr18	79485312	79485313	chr18:79485313:C:T	rs191303406	C	T	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr18	79485313	79485314	chr18:79485314:G:A	rs938852455	G	A	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr18	79485472	79485473	chr18:79485473:A:C	chr18:79485473:A:C	A	C	A	Sox2_MA0143.3	24	0	-	0	0	.
chr18	79485488	79485489	chr18:79485489:G:A	rs80040510	G	A	g	Sox2_MA0143.3	8	0	-	0	0	.
chr18	79485508	79485509	chr18:79485509:G:A	rs183369920	G	A	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr18	79495738	79495739	chr18:79495739:A:G	rs113310686	A	G	A	Sox2_MA0143.3	17	0	+	0	0	.
chr18	79504679	79504680	chr18:79504680:C:G	rs1660146	C	G	G	Sox2_MA0143.3	1	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr18	79507021	79507022	chr18:79507022:G:A	rs140983706	G	A	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr18	79523134	79523135	chr18:79523135:A:G	rs78063199	A	G	G	Sox2_MA0143.3	4	1	-	8.864090315184848	1.9553355358696274	CCTTTGTG
chr18	79523135	79523136	chr18:79523136:A:G	rs75352804	A	G	G	Sox2_MA0143.3	3	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr18	79523143	79523144	chr18:79523144:G:A	rs148294447	G	A	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr18	79555923	79555924	chr18:79555924:A:G	rs427046	A	G	G	Sox2_MA0143.3	15	0	-	0	0	.
chr18	79555924	79555925	chr18:79555925:A:C	rs9989590	A	C	A	Sox2_MA0143.3	14	0	-	0	0	.
chr18	79584722	79584723	chr18:79584723:T:C	rs576196	T	C	C	Sox2_MA0143.3	14	0	+	0	0	.
chr18	79590824	79590825	chr18:79590825:C:T	rs143939243	C	T	C	Sox2_MA0143.3	17	0	+	0	0	.
chr18	79599684	79599685	chr18:79599685:C:T	rs190707359	C	T	C	Sox2_MA0143.3	21	0	+	0	0	.
chr18	79657227	79657228	chr18:79657228:T:G	rs79972592	T	G	T	Sox2_MA0143.3	8	0	-	0	0	.
chr18	79689073	79689074	chr18:79689074:A:G	rs643782	A	G	A	Sox2_MA0143.3	-20	0	+	0	0	.
chr18	79691402	79691403	chr18:79691403:G:A	rs2169247	G	A	g	Sox2_MA0143.3	-2	0	+	0	0	.
chr18	79691404	79691405	chr18:79691405:C:T	chr18:79691405:C:T	C	T	C	Sox2_MA0143.3	0	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr18	79691431	79691432	chr18:79691432:C:T	rs2169248	C	T	C	Sox2_MA0143.3	27	0	+	0	0	.
chr18	79698216	79698217	chr18:79698217:C:A	rs141414048	C	A	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr18	79698253	79698254	chr18:79698254:G:A	rs753902177	G	A	G	Sox2_MA0143.3	22	0	+	0	0	.
chr18	79741316	79741317	chr18:79741317:G:A	rs571096	G	A	G	Sox2_MA0143.3	24	0	-	0	0	.
chr18	79776943	79776944	chr18:79776944:G:A	rs147218483	G	A	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr18	79779700	79779701	chr18:79779701:G:A	rs191495635	G	A	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr18	79781951	79781952	chr18:79781952:G:A	rs112564950	G	A	G	Sox2_MA0143.3	19	0	-	0	0	.
chr18	79781976	79781977	chr18:79781977:T:G	rs616362	T	G	T	Sox2_MA0143.3	-6	0	-	0	0	.
chr18	79831758	79831759	chr18:79831759:T:C	rs12605916	T	C	T	Sox2_MA0143.3	4	1	+	9.206767037375712	2.2980122580604916	CCTTTGTC
chr18	79856702	79856703	chr18:79856703:C:T	rs980427802	C	T	C	Sox2_MA0143.3	10	0	-	0	0	.
chr18	79875552	79875553	chr18:79875553:G:A	rs62103232	G	A	g	Sox2_MA0143.3	20	0	+	0	0	.
chr18	79875571	79875572	chr18:79875572:A:G	rs62103233	A	G	g	Sox2_MA0143.3	-4	0	-	0	0	.
chr18	79878967	79878968	chr18:79878968:G:A	rs28410029	G	A	G	Sox2_MA0143.3	7	1	-	9.019595766176417	9.613475778572903	CCATTGTC
chr18	79900014	79900015	chr18:79900015:T:C	rs737504	T	C	T	Sox2_MA0143.3	-3	0	+	0	0	.
chr18	79900030	79900031	chr18:79900031:G:C	rs72982245	G	C	G	Sox2_MA0143.3	13	0	+	0	0	.
chr18	79965365	79965366	chr18:79965366:A:G	rs57333397	A	G	A	Sox2_MA0143.3	-2	0	-	0	0	.
chr18	80064422	80064423	chr18:80064423:A:C	rs11664651	A	C	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr18	80176483	80176484	chr18:80176484:C:G	rs4799140	C	G	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr18	80191352	80191353	chr18:80191353:C:A	rs34299914	C	A	C	Sox2_MA0143.3	13	0	+	0	0	.
chr19	80869	80870	chr19:80870:T:C	rs78152317	T	C	T	Sox2_MA0143.3	-6	0	+	0	0	.
chr19	321873	321874	chr19:321874:T:C	rs12462719	T	C	C	Sox2_MA0143.3	2	1	-	9.019595766176417	2.900948058900136	CCATTGTC
chr19	372347	372348	chr19:372348:C:G	rs34140649	C	G	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr19	372874	372875	chr19:372875:C:T	rs2303813	C	T	C	Sox2_MA0143.3	19	0	-	0	0	.
chr19	418400	418401	chr19:418401:G:A	rs1045693584	G	A	G	Sox2_MA0143.3	27	0	-	0	0	.
chr19	418435	418436	chr19:418436:C:T	rs12610828	C	T	T	Sox2_MA0143.3	-8	0	-	0	0	.
chr19	435445	435446	chr19:435446:C:A	rs558969472	C	A	C	Sox2_MA0143.3	20	0	-	0	0	.
chr19	460015	460016	chr19:460016:T:C	rs376083347	T	C	t	Sox2_MA0143.3	25	0	-	0	0	.
chr19	460024	460025	chr19:460025:A:G	rs11669451	A	G	N	Sox2_MA0143.3	16	0	-	0	0	.
chr19	460026	460027	chr19:460027:G:A	rs11672759	G	A	N	Sox2_MA0143.3	14	0	-	0	0	.
chr19	460048	460049	chr19:460049:C:T	rs11667874	C	T	N	Sox2_MA0143.3	-8	0	-	0	0	.
chr19	485928	485929	chr19:485929:G:A	rs12611288	G	A	G	Sox2_MA0143.3	12	0	+	0	0	.
chr19	532652	532653	chr19:532653:C:T	rs774538437	C	T	C	Sox2_MA0143.3	24	0	-	0	0	.
chr19	532681	532682	chr19:532682:G:T	rs572183534	G	T	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr19	532682	532683	chr19:532683:A:C	rs537496597	A	C	A	Sox2_MA0143.3	-6	0	-	0	0	.
chr19	547554	547555	chr19:547555:G:A	rs2070796	G	A	G	Sox2_MA0143.3	26	0	+	0	0	.
chr19	568188	568189	chr19:568189:C:T	rs12978365	C	T	c	Sox2_MA0143.3	-6	0	+	0	0	.
chr19	571769	571770	chr19:571770:C:T	rs55706133	C	T	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr19	576465	576466	chr19:576466:A:C	rs72972182	A	C	A	Sox2_MA0143.3	8	0	+	0	0	.
chr19	586781	586782	chr19:586782:C:T	rs12609737	C	T	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr19	607315	607316	chr19:607316:G:A	rs56070065	G	A	G	Sox2_MA0143.3	16	0	+	0	0	.
chr19	629437	629438	chr19:629438:G:C	rs2283576	G	C	G	Sox2_MA0143.3	0	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr19	633411	633412	chr19:633412:C:T	rs113781054	C	T	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr19	675680	675681	chr19:675681:G:A	rs35083191	G	A	g	Sox2_MA0143.3	-15	0	-	0	0	.
chr19	710885	710886	chr19:710886:G:A	rs11878916	G	A	g	Sox2_MA0143.3	-4	0	-	0	0	.
chr19	718365	718366	chr19:718366:A:G	rs752216110	A	G	a	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr19	719030	719031	chr19:719031:C:A	rs145617179	C	A	c	Sox2_MA0143.3	18	0	-	0	0	.
chr19	799445	799446	chr19:799446:A:C	chr19:799446:A:C	A	C	A	Sox2_MA0143.3	-2	0	-	0	0	.
chr19	840838	840839	chr19:840839:T:C	rs2074638	T	C	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr19	859213	859214	chr19:859214:C:A	rs1683564	C	A	C	Sox2_MA0143.3	20	0	-	0	0	.
chr19	925256	925257	chr19:925257:G:A	rs192221920	G	A	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr19	925269	925270	chr19:925270:A:C	rs111683433	A	C	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr19	971932	971933	chr19:971933:A:G	rs1051504	A	G	a	Sox2_MA0143.3	-1	0	-	0	0	.
chr19	1053299	1053300	chr19:1053300:C:T	rs3829687	C	T	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr19	1101921	1101922	chr19:1101922:G:A	rs36207556	G	A	G	Sox2_MA0143.3	11	0	-	0	0	.
chr19	1154610	1154611	chr19:1154611:C:T	rs141837990	C	T	C	Sox2_MA0143.3	18	0	+	0	0	.
chr19	1167157	1167158	chr19:1167158:C:T	rs57813069	C	T	C	Sox2_MA0143.3	18	0	-	0	0	.
chr19	1167158	1167159	chr19:1167159:A:G	rs4807624	A	G	G	Sox2_MA0143.3	17	0	-	0	0	.
chr19	1189540	1189541	chr19:1189541:C:G	rs9304883	C	G	C	Sox2_MA0143.3	20	0	+	0	0	.
chr19	1246636	1246637	chr19:1246637:G:A	rs10410720	G	A	A	Sox2_MA0143.3	-14	0	+	0	0	.
chr19	1249472	1249473	chr19:1249473:T:C	rs189868505	T	C	T	Sox2_MA0143.3	-12	0	-	0	0	.
chr19	1249564	1249565	chr19:1249565:G:C	rs1051353519	G	C	G	Sox2_MA0143.3	5	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr19	1250907	1250908	chr19:1250908:C:T	rs979012249	C	T	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr19	1252380	1252381	chr19:1252381:C:T	rs192074851	C	T	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr19	1284573	1284574	chr19:1284574:G:C	rs146151728	G	C	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr19	1325445	1325446	chr19:1325446:T:G	rs549202413	T	G	T	Sox2_MA0143.3	-16	0	-	0	0	.
chr19	1354714	1354715	chr19:1354715:G:A	rs544466193	G	A	G	Sox2_MA0143.3	19	0	-	0	0	.
chr19	1378011	1378012	chr19:1378012:C:G	rs116900972	C	G	C	Sox2_MA0143.3	16	0	+	0	0	.
chr19	1383513	1383514	chr19:1383514:A:G	chr19:1383514:A:G	A	G	A	Sox2_MA0143.3	-11	0	+	0	0	.
chr19	1383528	1383529	chr19:1383529:T:C	rs180738789	T	C	T	Sox2_MA0143.3	4	1	+	3.5547341015215945	-3.3540206777936254	CCTTTGTA
chr19	1383542	1383543	chr19:1383543:G:A	rs757490115	G	A	G	Sox2_MA0143.3	18	0	+	0	0	.
chr19	1383548	1383549	chr19:1383549:C:T	rs565915855	C	T	C	Sox2_MA0143.3	24	0	+	0	0	.
chr19	1383550	1383551	chr19:1383551:G:C	rs117758624	G	C	G	Sox2_MA0143.3	26	0	+	0	0	.
chr19	1394865	1394866	chr19:1394866:T:C	rs73515054	T	C	C	Sox2_MA0143.3	6	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr19	1394869	1394870	chr19:1394870:G:C	rs73920452	G	C	G	Sox2_MA0143.3	10	0	+	0	0	.
chr19	1452052	1452053	chr19:1452053:C:T	rs569272711	C	T	C	Sox2_MA0143.3	11	0	-	0	0	.
chr19	1490664	1490665	chr19:1490665:T:C	rs67782512	T	C	T	Sox2_MA0143.3	23	0	+	0	0	.
chr19	1490779	1490780	chr19:1490780:A:G	rs540356198	A	G	A	Sox2_MA0143.3	-14	0	+	0	0	.
chr19	1491113	1491114	chr19:1491114:G:A	rs544155967	G	A	G	Sox2_MA0143.3	14	0	+	0	0	.
chr19	1567248	1567249	chr19:1567249:G:C	rs1033152683	G	C	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr19	1572404	1572405	chr19:1572405:T:C	rs11673088	T	C	T	Sox2_MA0143.3	3	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr19	1592287	1592288	chr19:1592288:T:C	rs932697833	T	C	T	Sox2_MA0143.3	-7	0	-	0	0	.
chr19	1657281	1657282	chr19:1657282:G:A	rs1541499	G	A	A	Sox2_MA0143.3	-14	0	-	0	0	.
chr19	1658257	1658258	chr19:1658258:A:C	rs67127215	A	C	A	Sox2_MA0143.3	9	0	+	0	0	.
chr19	1742934	1742935	chr19:1742935:A:C	rs55712566	A	C	C	Sox2_MA0143.3	14	0	-	0	0	.
chr19	1805715	1805716	chr19:1805716:G:A	rs568693665	G	A	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr19	1812745	1812746	chr19:1812746:G:T	rs1047681571	G	T	G	Sox2_MA0143.3	-3	0	-	0	0	.
chr19	1852692	1852693	chr19:1852693:C:T	rs3746041	C	T	C	Sox2_MA0143.3	5	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr19	1853137	1853138	chr19:1853138:C:T	rs57634896	C	T	C	Sox2_MA0143.3	13	0	-	0	0	.
chr19	1874308	1874309	chr19:1874309:T:C	rs11878502	T	C	T	Sox2_MA0143.3	-14	0	-	0	0	.
chr19	1986520	1986521	chr19:1986521:G:A	rs7253519	G	A	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr19	1986553	1986554	chr19:1986554:C:T	rs145760224	C	T	C	Sox2_MA0143.3	17	0	+	0	0	.
chr19	2019603	2019604	chr19:2019604:T:A	rs117884869	T	A	t	Sox2_MA0143.3	-3	0	+	0	0	.
chr19	2042745	2042746	chr19:2042746:C:T	rs72981432	C	T	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr19	2042746	2042747	chr19:2042747:G:A	rs75160224	G	A	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr19	2058815	2058816	chr19:2058816:T:C	rs10423642	T	C	T	Sox2_MA0143.3	3	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr19	2289531	2289532	chr19:2289532:T:G	rs28463184	T	G	T	Sox2_MA0143.3	-6	0	+	0	0	.
chr19	2289536	2289537	chr19:2289537:C:T	rs985568616	C	T	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr19	2289555	2289556	chr19:2289556:G:A	rs139475767	G	A	G	Sox2_MA0143.3	18	0	+	0	0	.
chr19	2316369	2316370	chr19:2316370:C:T	rs112062973	C	T	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr19	2341302	2341303	chr19:2341303:G:A	rs147464402	G	A	G	Sox2_MA0143.3	9	0	+	0	0	.
chr19	2426209	2426210	chr19:2426210:G:C	rs78609089	G	C	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr19	2449238	2449239	chr19:2449239:C:T	rs74473284	C	T	C	Sox2_MA0143.3	12	0	+	0	0	.
chr19	2475276	2475277	chr19:2475277:C:G	rs796073189	C	G	C	Sox2_MA0143.3	5	1	-	9.613475778572903	2.7047209992576837	CCATTGTT
chr19	2475290	2475291	chr19:2475291:A:C	rs3783492	A	C	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr19	2548184	2548185	chr19:2548185:T:A	rs7258136	T	A	A	Sox2_MA0143.3	-11	0	-	0	0	.
chr19	2605014	2605015	chr19:2605015:T:A	rs75711640	T	A	t	Sox2_MA0143.3	-19	0	-	0	0	.
chr19	2618880	2618881	chr19:2618881:G:T	rs10417469	G	T	G	Sox2_MA0143.3	5	1	+	8.676919043985553	1.7681642646703324	CCATTGTG
chr19	2711317	2711318	chr19:2711318:G:C	rs72980733	G	C	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr19	2711319	2711320	chr19:2711320:C:T	rs3944030	C	T	C	Sox2_MA0143.3	1	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr19	2723496	2723497	chr19:2723497:T:C	rs56380238	T	C	T	Sox2_MA0143.3	2	1	+	8.864090315184848	2.5582713367092715	CCTTTGTG
chr19	2732742	2732743	chr19:2732743:G:A	rs9160	G	A	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr19	2775951	2775952	chr19:2775952:C:T	rs115240418	C	T	C	Sox2_MA0143.3	23	0	-	0	0	.
chr19	2887691	2887692	chr19:2887692:G:C	rs7259875	G	C	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr19	3028573	3028574	chr19:3028574:C:T	rs117117014	C	T	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr19	3118208	3118209	chr19:3118209:G:C	rs308048	G	C	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr19	3184084	3184085	chr19:3184085:C:T	rs562257	C	T	T	Sox2_MA0143.3	-12	0	+	0	0	.
chr19	3185078	3185079	chr19:3185079:C:T	rs732137	C	T	C	Sox2_MA0143.3	10	0	-	0	0	.
chr19	3222857	3222858	chr19:3222858:A:G	rs426633	A	G	G	Sox2_MA0143.3	15	0	-	0	0	.
chr19	3224612	3224613	chr19:3224613:C:T	chr19:3224613:C:T	C	T	-	Sox2_MA0143.3	18	0	+	0	0	.
chr19	3268786	3268787	chr19:3268787:A:G	rs312933	A	G	G	Sox2_MA0143.3	6	1	-	9.019595766176417	2.110840986861197	CCATTGTC
chr19	3348146	3348147	chr19:3348147:G:A	rs74921015	G	A	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr19	3369989	3369990	chr19:3369990:C:G	rs75694930	C	G	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr19	3479280	3479281	chr19:3479281:T:G	rs1227599334	T	G	T	Sox2_MA0143.3	26	0	-	0	0	.
chr19	3556342	3556343	chr19:3556343:C:A	chr19:3556343:C:A	C	A	G	Sox2_MA0143.3	15	0	-	0	0	.
chr19	3556342	3556343	chr19:3556343:C:G	rs1638542	C	G	G	Sox2_MA0143.3	15	0	-	0	0	.
chr19	3577479	3577480	chr19:3577480:C:T	rs35682312	C	T	T	Sox2_MA0143.3	19	0	+	0	0	.
chr19	3581099	3581100	chr19:3581100:T:C	rs10425077	T	C	-	Sox2_MA0143.3	18	0	+	0	0	.
chr19	3581102	3581103	chr19:3581103:A:C	rs12977678	A	C	-	Sox2_MA0143.3	21	0	+	0	0	.
chr19	3670946	3670947	chr19:3670947:A:C	rs542016314	A	C	A	Sox2_MA0143.3	2	1	-	8.864090315184848	2.5582713367092715	CCTTTGTG
chr19	3719823	3719824	chr19:3719824:C:T	rs59641871	C	T	C	Sox2_MA0143.3	18	0	-	0	0	.
chr19	3763330	3763331	chr19:3763331:G:A	rs73531455	G	A	G	Sox2_MA0143.3	14	0	+	0	0	.
chr19	3840158	3840159	chr19:3840159:C:T	rs12461613	C	T	c	Sox2_MA0143.3	-9	0	-	0	0	.
chr19	4031811	4031812	chr19:4031812:C:T	rs2379623	C	T	C	Sox2_MA0143.3	26	0	-	0	0	.
chr19	4077767	4077768	chr19:4077768:C:T	rs77828924	C	T	C	Sox2_MA0143.3	18	0	-	0	0	.
chr19	4077791	4077792	chr19:4077792:G:T	rs111551407	G	T	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr19	4182373	4182374	chr19:4182374:C:T	rs114987740	C	T	C	Sox2_MA0143.3	12	0	+	0	0	.
chr19	4268371	4268372	chr19:4268372:A:G	rs78572506	A	G	A	Sox2_MA0143.3	-5	0	+	0	0	.
chr19	4279515	4279516	chr19:4279516:A:G	rs535770284	A	G	A	Sox2_MA0143.3	-19	0	-	0	0	.
chr19	4392717	4392718	chr19:4392718:G:A	rs9973266	G	A	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr19	4415508	4415509	chr19:4415509:C:T	rs243357	C	T	c	Sox2_MA0143.3	-8	0	-	0	0	.
chr19	4415509	4415510	chr19:4415510:G:A	rs559788533	G	A	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr19	4575475	4575476	chr19:4575476:A:G	rs181978327	A	G	A	Sox2_MA0143.3	22	0	-	0	0	.
chr19	4612366	4612367	chr19:4612367:G:A	rs73531977	G	A	g	Sox2_MA0143.3	26	0	-	0	0	.
chr19	4806692	4806693	chr19:4806693:T:G	rs62113939	T	G	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr19	4813076	4813077	chr19:4813077:G:A	rs114066007	G	A	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr19	4813080	4813081	chr19:4813081:T:A	rs143303426	T	A	T	Sox2_MA0143.3	-15	0	+	0	0	.
chr19	4912312	4912313	chr19:4912313:A:G	rs3786943	A	G	A	Sox2_MA0143.3	15	0	+	0	0	.
chr19	4969463	4969464	chr19:4969464:C:A	chr19:4969464:C:A	C	A	C	Sox2_MA0143.3	5	1	-	9.019595766176417	2.110840986861197	CCATTGTC
chr19	4976821	4976822	chr19:4976822:T:C	rs573891165	T	C	T	Sox2_MA0143.3	14	0	+	0	0	.
chr19	4992106	4992107	chr19:4992107:G:A	rs75118439	G	A	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr19	5013819	5013820	chr19:5013820:T:C	rs12459464	T	C	T	Sox2_MA0143.3	-6	0	+	0	0	.
chr19	5032769	5032770	chr19:5032770:C:T	rs565864761	C	T	C	Sox2_MA0143.3	21	0	+	0	0	.
chr19	5052703	5052704	chr19:5052704:C:T	chr19:5052704:C:T	C	T	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr19	5226061	5226062	chr19:5226062:G:A	rs112343585	G	A	G	Sox2_MA0143.3	17	0	+	0	0	.
chr19	5239101	5239102	chr19:5239102:A:G	rs36155090	A	G	A	Sox2_MA0143.3	26	0	-	0	0	.
chr19	5240380	5240381	chr19:5240381:C:T	rs3746130	C	T	C	Sox2_MA0143.3	5	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr19	5260662	5260663	chr19:5260663:G:A	rs28450931	G	A	G	Sox2_MA0143.3	24	0	-	0	0	.
chr19	5319869	5319870	chr19:5319870:C:T	rs77440484	C	T	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr19	5331041	5331042	chr19:5331042:T:G	rs7257373	T	G	G	Sox2_MA0143.3	23	0	-	0	0	.
chr19	5346013	5346014	chr19:5346014:T:C	rs909533178	T	C	T	Sox2_MA0143.3	18	0	-	0	0	.
chr19	5420773	5420774	chr19:5420774:T:C	rs900672	T	C	T	Sox2_MA0143.3	-20	0	+	0	0	.
chr19	5494998	5494999	chr19:5494999:T:C	rs12972112	T	C	C	Sox2_MA0143.3	2	1	-	8.676919043985553	2.5582713367092715	CCATTGTG
chr19	5823685	5823686	chr19:5823686:C:T	rs909003239	C	T	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr19	5823689	5823690	chr19:5823690:C:T	rs991771700	C	T	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr19	5910178	5910179	chr19:5910179:T:C	rs73539613	T	C	T	Sox2_MA0143.3	9	0	-	0	0	.
chr19	5937227	5937228	chr19:5937228:G:C	rs149852544	G	C	G	Sox2_MA0143.3	1	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr19	5953752	5953753	chr19:5953753:C:G	rs561507000	C	G	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr19	6057286	6057287	chr19:6057287:G:A	rs147378553	G	A	G	Sox2_MA0143.3	24	0	-	0	0	.
chr19	6204231	6204232	chr19:6204232:G:A	rs76404092	G	A	A	Sox2_MA0143.3	-15	0	-	0	0	.
chr19	6214854	6214855	chr19:6214855:G:A	rs3827013	G	A	G	Sox2_MA0143.3	-14	0	+	0	0	.
chr19	6373278	6373279	chr19:6373279:G:A	rs191173299	G	A	g	Sox2_MA0143.3	23	0	-	0	0	.
chr19	6373301	6373302	chr19:6373302:G:C	rs182200160	G	C	g	Sox2_MA0143.3	0	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr19	6489802	6489803	chr19:6489803:A:G	rs371164	A	G	a	Sox2_MA0143.3	4	1	-	3.5547341015215945	-3.3540206777936254	CCTTTGTA
chr19	6645166	6645167	chr19:6645167:A:G	rs392751	A	G	a	Sox2_MA0143.3	4	1	-	8.864090315184848	1.9553355358696274	CCTTTGTG
chr19	6678103	6678104	chr19:6678104:G:A	rs344556	G	A	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr19	6743159	6743160	chr19:6743160:A:C	chr19:6743160:A:C	A	C	A	Sox2_MA0143.3	-13	0	-	0	0	.
chr19	6803555	6803556	chr19:6803556:A:G	rs13345037	A	G	A	Sox2_MA0143.3	6	1	-	9.019595766176417	2.110840986861197	CCATTGTC
chr19	6842656	6842657	chr19:6842657:G:A	rs75586891	G	A	-	Sox2_MA0143.3	-18	0	-	0	0	.
chr19	6867307	6867308	chr19:6867308:C:A	rs113191510	C	A	c	Sox2_MA0143.3	-5	0	-	0	0	.
chr19	6879531	6879532	chr19:6879532:G:T	rs12610529	G	T	G	Sox2_MA0143.3	9	0	-	0	0	.
chr19	6947926	6947927	chr19:6947927:A:G	rs571934190	A	G	A	Sox2_MA0143.3	17	0	-	0	0	.
chr19	6984915	6984916	chr19:6984916:T:C	rs34752448	T	C	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr19	7135280	7135281	chr19:7135281:A:G	rs12610022	A	G	G	Sox2_MA0143.3	9	0	-	0	0	.
chr19	7182741	7182742	chr19:7182742:T:A	rs8108622	T	A	A	Sox2_MA0143.3	4	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr19	7254811	7254812	chr19:7254812:G:A	rs145501390	G	A	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr19	7262557	7262558	chr19:7262558:T:C	rs7258382	T	C	C	Sox2_MA0143.3	18	0	-	0	0	.
chr19	7433674	7433675	chr19:7433675:G:C	rs141756417	G	C	G	Sox2_MA0143.3	27	0	-	0	0	.
chr19	7448746	7448747	chr19:7448747:G:C	rs12609999	G	C	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr19	7450004	7450005	chr19:7450005:T:G	rs28428813	T	G	T	Sox2_MA0143.3	19	0	+	0	0	.
chr19	7489125	7489126	chr19:7489126:C:T	rs115226150	C	T	C	Sox2_MA0143.3	8	0	+	0	0	.
chr19	7506511	7506512	chr19:7506512:A:G	rs144370133	A	G	A	Sox2_MA0143.3	-16	0	+	0	0	.
chr19	7546065	7546066	chr19:7546066:A:G	rs11881687	A	G	A	Sox2_MA0143.3	-17	0	-	0	0	.
chr19	7562754	7562755	chr19:7562755:A:G	rs545013	A	G	G	Sox2_MA0143.3	25	0	+	0	0	.
chr19	7678934	7678935	chr19:7678935:A:G	rs72996468	A	G	A	Sox2_MA0143.3	12	0	-	0	0	.
chr19	7743792	7743793	chr19:7743793:A:G	rs73493971	A	G	a	Sox2_MA0143.3	22	0	-	0	0	.
chr19	7762852	7762853	chr19:7762853:G:A	rs76634109	G	A	g	Sox2_MA0143.3	-19	0	-	0	0	.
chr19	7800024	7800025	chr19:7800025:C:T	chr19:7800025:C:T	C	T	-	Sox2_MA0143.3	20	0	-	0	0	.
chr19	7801077	7801078	chr19:7801078:G:T	rs2335800	G	T	a	Sox2_MA0143.3	26	0	-	0	0	.
chr19	7944125	7944126	chr19:7944126:T:C	rs552771054	T	C	T	Sox2_MA0143.3	13	0	-	0	0	.
chr19	7944130	7944131	chr19:7944131:T:C	rs11669069	T	C	T	Sox2_MA0143.3	8	0	-	0	0	.
chr19	8125865	8125866	chr19:8125866:T:C	rs35988441	T	C	T	Sox2_MA0143.3	-16	0	-	0	0	.
chr19	8268816	8268817	chr19:8268817:C:G	rs8110758	C	G	-	Sox2_MA0143.3	1	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr19	8307859	8307860	chr19:8307860:C:T	rs180797395	C	T	C	Sox2_MA0143.3	16	0	-	0	0	.
chr19	8307867	8307868	chr19:8307868:T:G	chr19:8307868:T:G	T	G	T	Sox2_MA0143.3	8	0	-	0	0	.
chr19	8309666	8309667	chr19:8309667:G:A	rs112699451	G	A	G	Sox2_MA0143.3	5	1	+	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr19	8309688	8309689	chr19:8309689:G:T	rs76255172	G	T	T	Sox2_MA0143.3	27	0	+	0	0	.
chr19	8324635	8324636	chr19:8324636:C:T	rs1019757	C	T	C	Sox2_MA0143.3	23	0	+	0	0	.
chr19	8390427	8390428	chr19:8390428:G:A	rs2913976	G	A	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr19	8422068	8422069	chr19:8422069:C:T	rs10469477	C	T	C	Sox2_MA0143.3	24	0	+	0	0	.
chr19	8488572	8488573	chr19:8488573:G:A	rs78149642	G	A	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr19	8505871	8505872	chr19:8505872:A:C	rs2967570	A	C	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr19	8505889	8505890	chr19:8505890:G:T	chr19:8505890:G:T	G	T	G	Sox2_MA0143.3	16	0	+	0	0	.
chr19	8505896	8505897	chr19:8505897:T:C	rs776088159	T	C	T	Sox2_MA0143.3	23	0	+	0	0	.
chr19	8526034	8526035	chr19:8526035:G:A	rs10422681	G	A	G	Sox2_MA0143.3	13	0	+	0	0	.
chr19	8683391	8683392	chr19:8683392:C:T	rs4804325	C	T	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr19	8791439	8791440	chr19:8791440:C:T	rs140313254	C	T	c	Sox2_MA0143.3	27	0	+	0	0	.
chr19	9000582	9000583	chr19:9000583:G:C	rs1609455	G	C	G	Sox2_MA0143.3	22	0	-	0	0	.
chr19	9171701	9171702	chr19:9171702:G:A	rs7257452	G	A	.	Sox2_MA0143.3	25	0	+	0	0	.
chr19	9283020	9283021	chr19:9283021:G:C	rs8104518	G	C	N	Sox2_MA0143.3	-3	0	-	0	0	.
chr19	9322293	9322294	chr19:9322294:C:A	rs143196420	C	A	C	Sox2_MA0143.3	0	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr19	9362552	9362553	chr19:9362553:T:G	rs2278406	T	G	T	Sox2_MA0143.3	-1	0	+	0	0	.
chr19	9597009	9597010	chr19:9597010:A:C	rs10406764	A	C	C	Sox2_MA0143.3	-20	0	-	0	0	.
chr19	9621775	9621776	chr19:9621776:C:T	rs7258760	C	T	C	Sox2_MA0143.3	24	0	-	0	0	.
chr19	9727878	9727879	chr19:9727879:G:C	rs139695121	G	C	G	Sox2_MA0143.3	20	0	+	0	0	.
chr19	9883447	9883448	chr19:9883448:G:A	chr19:9883448:G:A	G	A	G	Sox2_MA0143.3	-5	0	+	0	0	.
chr19	9883447	9883448	chr19:9883448:G:C	rs12986253	G	C	G	Sox2_MA0143.3	-5	0	+	0	0	.
chr19	10004747	10004748	chr19:10004748:G:A	rs889126	G	A	G	Sox2_MA0143.3	21	0	-	0	0	.
chr19	10067386	10067387	chr19:10067387:G:T	rs55761331	G	T	g	Sox2_MA0143.3	20	0	-	0	0	.
chr19	10145109	10145110	chr19:10145110:G:A	rs10412529	G	A	G	Sox2_MA0143.3	21	0	-	0	0	.
chr19	10230078	10230079	chr19:10230079:G:A	rs112557438	G	A	G	Sox2_MA0143.3	0	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr19	10231492	10231493	chr19:10231493:C:A	rs945614381	C	A	C	Sox2_MA0143.3	11	0	+	0	0	.
chr19	10231496	10231497	chr19:10231497:C:G	rs60797392	C	G	-	Sox2_MA0143.3	15	0	+	0	0	.
chr19	10231498	10231499	chr19:10231499:C:A	rs552041385	C	A	-	Sox2_MA0143.3	17	0	+	0	0	.
chr19	10236355	10236356	chr19:10236356:C:T	rs8105174	C	T	c	Sox2_MA0143.3	18	0	-	0	0	.
chr19	10238648	10238649	chr19:10238649:T:A	rs2017213	T	A	t	Sox2_MA0143.3	25	0	-	0	0	.
chr19	10257175	10257176	chr19:10257176:T:G	rs73015182	T	G	t	Sox2_MA0143.3	-4	0	+	0	0	.
chr19	10269605	10269606	chr19:10269606:T:G	rs5030387	T	G	T	Sox2_MA0143.3	22	0	+	0	0	.
chr19	10286561	10286562	chr19:10286562:C:T	rs281437	C	T	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr19	10318443	10318444	chr19:10318444:T:C	rs281427	T	C	C	Sox2_MA0143.3	22	0	+	0	0	.
chr19	10602307	10602308	chr19:10602308:A:G	chr19:10602308:A:G	A	G	A	Sox2_MA0143.3	13	0	-	0	0	.
chr19	10602335	10602336	chr19:10602336:C:A	rs530594630	C	A	c	Sox2_MA0143.3	-15	0	-	0	0	.
chr19	10616362	10616363	chr19:10616363:T:A	rs74761821	T	A	T	Sox2_MA0143.3	13	0	-	0	0	.
chr19	10654690	10654691	chr19:10654691:T:C	rs80257701	T	C	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr19	10797400	10797401	chr19:10797401:C:T	rs147668465	C	T	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr19	10891902	10891903	chr19:10891903:A:G	rs7254708	A	G	G	Sox2_MA0143.3	-3	0	-	0	0	.
chr19	10891908	10891909	chr19:10891909:G:A	rs143554559	G	A	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr19	11005482	11005483	chr19:11005483:G:A	rs17001079	G	A	A	Sox2_MA0143.3	-18	0	+	0	0	.
chr19	11035176	11035177	chr19:11035177:G:A	rs77858807	G	A	G	Sox2_MA0143.3	20	0	-	0	0	.
chr19	11052885	11052886	chr19:11052886:C:T	rs1529729	C	T	T	Sox2_MA0143.3	1	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr19	11137749	11137750	chr19:11137750:T:G	rs8110515	T	G	T	Sox2_MA0143.3	8	0	-	0	0	.
chr19	11137825	11137826	chr19:11137826:C:T	rs8107304	C	T	C	Sox2_MA0143.3	11	0	-	0	0	.
chr19	11139661	11139662	chr19:11139662:T:C	rs377507190	T	C	T	Sox2_MA0143.3	4	1	+	9.800647049772198	2.8918922704569785	CCTTTGTT
chr19	11179735	11179736	chr19:11179736:G:A	rs116653612	G	A	G	Sox2_MA0143.3	10	0	-	0	0	.
chr19	11239811	11239812	chr19:11239812:C:T	rs2278426	C	T	C	Sox2_MA0143.3	12	0	-	0	0	.
chr19	11280110	11280111	chr19:11280111:C:T	rs192673060	C	T	C	Sox2_MA0143.3	14	0	+	0	0	.
chr19	11280120	11280121	chr19:11280121:A:G	rs73925157	A	G	A	Sox2_MA0143.3	24	0	+	0	0	.
chr19	11383268	11383269	chr19:11383269:G:C	rs112978768	G	C	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr19	11447236	11447237	chr19:11447237:T:C	rs160840	T	C	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr19	11457525	11457526	chr19:11457526:C:T	rs77930778	C	T	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr19	11831799	11831800	chr19:11831800:A:C	rs394416	A	C	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr19	11848747	11848748	chr19:11848748:A:G	rs939537359	A	G	A	Sox2_MA0143.3	-20	0	+	0	0	.
chr19	11848748	11848749	chr19:11848749:T:C	rs76055312	T	C	T	Sox2_MA0143.3	-19	0	+	0	0	.
chr19	11964256	11964257	chr19:11964257:G:C	rs13343452	G	C	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr19	12059688	12059689	chr19:12059689:T:G	rs539810807	T	G	T	Sox2_MA0143.3	14	0	-	0	0	.
chr19	12059721	12059722	chr19:12059722:C:T	chr19:12059722:C:T	C	T	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr19	12145542	12145543	chr19:12145543:T:G	rs12972621	T	G	T	Sox2_MA0143.3	25	0	-	0	0	.
chr19	12289521	12289522	chr19:12289522:T:C	rs114343263	T	C	-	Sox2_MA0143.3	2	1	+	3.5547341015215945	-2.751084876953981	CCTTTGTA
chr19	12440972	12440973	chr19:12440973:C:T	rs1351020665	C	T	-	Sox2_MA0143.3	14	0	-	0	0	.
chr19	12440974	12440975	chr19:12440975:A:C	rs3745658	A	C	-	Sox2_MA0143.3	12	0	-	0	0	.
chr19	12440985	12440986	chr19:12440986:G:C	rs563908480	G	C	-	Sox2_MA0143.3	1	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr19	12451329	12451330	chr19:12451330:T:G	rs6511808	T	G	G	Sox2_MA0143.3	9	0	-	0	0	.
chr19	12495379	12495380	chr19:12495380:C:G	rs542372389	C	G	C	Sox2_MA0143.3	27	0	-	0	0	.
chr19	12495408	12495409	chr19:12495409:G:A	rs78741819	G	A	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr19	12655555	12655556	chr19:12655556:G:A	rs8107642	G	A	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr19	12784577	12784578	chr19:12784578:C:T	rs1183173918	C	T	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr19	12838918	12838919	chr19:12838919:G:C	rs73503474	G	C	G	Sox2_MA0143.3	20	0	+	0	0	.
chr19	12864499	12864500	chr19:12864500:T:C	rs73925233	T	C	T	Sox2_MA0143.3	-14	0	+	0	0	.
chr19	12881764	12881765	chr19:12881765:G:T	rs7249143	G	T	T	Sox2_MA0143.3	-3	0	+	0	0	.
chr19	12883325	12883326	chr19:12883326:T:C	rs12609744	T	C	T	Sox2_MA0143.3	2	1	+	3.5547341015215945	-2.751084876953981	CCTTTGTA
chr19	13021400	13021401	chr19:13021401:G:T	rs77569445	G	T	G	Sox2_MA0143.3	11	0	+	0	0	.
chr19	13039039	13039040	chr19:13039040:T:C	rs75413320	T	C	T	Sox2_MA0143.3	-12	0	-	0	0	.
chr19	13091624	13091625	chr19:13091625:G:A	rs534241504	G	A	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr19	13102462	13102463	chr19:13102463:T:C	rs138326911	T	C	T	Sox2_MA0143.3	9	0	-	0	0	.
chr19	13131210	13131211	chr19:13131211:A:G	rs4926210	A	G	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr19	13156370	13156371	chr19:13156371:G:T	rs892020	G	T	G	Sox2_MA0143.3	25	0	-	0	0	.
chr19	13209552	13209553	chr19:13209553:C:A	rs151061233	C	A	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr19	13328200	13328201	chr19:13328201:C:G	rs10404089	C	G	G	Sox2_MA0143.3	26	0	-	0	0	.
chr19	13354186	13354187	chr19:13354187:A:C	rs4926278	A	C	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr19	13429773	13429774	chr19:13429774:C:T	rs34684360	C	T	c	Sox2_MA0143.3	-5	0	-	0	0	.
chr19	13526906	13526907	chr19:13526907:G:T	rs5827198	G	T	G	Sox2_MA0143.3	23	0	-	0	0	.
chr19	13554880	13554881	chr19:13554881:A:T	rs61307586	A	T	A	Sox2_MA0143.3	-11	0	-	0	0	.
chr19	13558033	13558034	chr19:13558034:A:T	rs7259751	A	T	T	Sox2_MA0143.3	2	1	-	8.864090315184848	8.676919043985553	CCTTTGTG
chr19	13692355	13692356	chr19:13692356:G:A	rs7258177	G	A	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr19	13692357	13692358	chr19:13692358:G:A	chr19:13692358:G:A	G	A	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr19	13721449	13721450	chr19:13721450:G:A	rs534936563	G	A	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr19	13851365	13851366	chr19:13851366:C:T	rs117223564	C	T	C	Sox2_MA0143.3	22	0	-	0	0	.
chr19	13851402	13851403	chr19:13851403:T:A	rs577422228	T	A	T	Sox2_MA0143.3	-15	0	-	0	0	.
chr19	13864299	13864300	chr19:13864300:C:T	rs570265418	C	T	C	Sox2_MA0143.3	23	0	+	0	0	.
chr19	13882643	13882644	chr19:13882644:C:T	rs2242130	C	T	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr19	13926931	13926932	chr19:13926932:A:C	rs750581	A	C	C	Sox2_MA0143.3	4	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr19	13926954	13926955	chr19:13926955:C:T	rs750580	C	T	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr19	14035245	14035246	chr19:14035246:T:C	rs6511906	T	C	C	Sox2_MA0143.3	2	1	+	9.206767037375712	2.900948058900136	CCTTTGTC
chr19	14035247	14035248	chr19:14035248:T:C	rs6511907	T	C	C	Sox2_MA0143.3	4	1	+	9.206767037375712	2.2980122580604916	CCTTTGTC
chr19	14166488	14166489	chr19:14166489:T:C	rs78760577	T	C	T	Sox2_MA0143.3	-8	0	-	0	0	.
chr19	14196298	14196299	chr19:14196299:A:G	rs60107824	A	G	A	Sox2_MA0143.3	27	0	-	0	0	.
chr19	14200441	14200442	chr19:14200442:G:A	rs181103685	G	A	G	Sox2_MA0143.3	-5	0	+	0	0	.
chr19	14363388	14363389	chr19:14363389:C:T	rs186205867	C	T	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr19	14383838	14383839	chr19:14383839:G:A	rs9917022	G	A	A	Sox2_MA0143.3	1	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr19	14427807	14427808	chr19:14427808:T:C	rs8103484	T	C	C	Sox2_MA0143.3	16	0	+	0	0	.
chr19	14498398	14498399	chr19:14498399:A:G	rs7254715	A	G	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr19	14627703	14627704	chr19:14627704:A:T	rs13339747	A	T	.	Sox2_MA0143.3	20	0	+	0	0	.
chr19	14648223	14648224	chr19:14648224:C:A	rs4808849	C	A	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr19	14689029	14689030	chr19:14689030:T:C	rs74512965	T	C	T	Sox2_MA0143.3	-14	0	+	0	0	.
chr19	14699849	14699850	chr19:14699850:A:G	rs62125493	A	G	A	Sox2_MA0143.3	9	0	+	0	0	.
chr19	14731563	14731564	chr19:14731564:C:T	rs2524368	C	T	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr19	14733892	14733893	chr19:14733893:C:T	rs2214472	C	T	C	Sox2_MA0143.3	5	1	-	9.613475778572903	2.7047209992576837	CCATTGTT
chr19	14775060	14775061	chr19:14775061:G:A	rs59670438	G	A	G	Sox2_MA0143.3	27	0	+	0	0	.
chr19	14831183	14831184	chr19:14831184:T:C	rs8109791	T	C	.	Sox2_MA0143.3	16	0	-	0	0	.
chr19	14954751	14954752	chr19:14954752:A:G	rs16980150	A	G	A	Sox2_MA0143.3	4	1	-	3.5547341015215945	-3.3540206777936254	CCTTTGTA
chr19	14969439	14969440	chr19:14969440:T:A	rs62113279	T	A	T	Sox2_MA0143.3	-11	0	-	0	0	.
chr19	14973257	14973258	chr19:14973258:C:T	rs3761099	C	T	C	Sox2_MA0143.3	16	0	-	0	0	.
chr19	14979381	14979382	chr19:14979382:A:C	rs1007505	A	C	a	Sox2_MA0143.3	-8	0	-	0	0	.
chr19	15098211	15098212	chr19:15098212:G:A	rs75532352	G	A	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr19	15098231	15098232	chr19:15098232:T:G	rs10221448	T	G	T	Sox2_MA0143.3	7	1	+	9.800647049772198	8.864090315184848	CCTTTGTT
chr19	15125230	15125231	chr19:15125231:G:A	rs143826939	G	A	G	Sox2_MA0143.3	14	0	+	0	0	.
chr19	15150011	15150012	chr19:15150012:G:C	rs56248468	G	C	G	Sox2_MA0143.3	-9	0	+	0	0	.
chr19	15266193	15266194	chr19:15266194:C:T	rs186596993	C	T	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr19	15297532	15297533	chr19:15297533:C:T	rs117438644	C	T	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr19	15478516	15478517	chr19:15478517:C:T	rs959117	C	T	c	Sox2_MA0143.3	5	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr19	15644581	15644582	chr19:15644582:G:C	rs2077080	G	C	C	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr19	15681431	15681432	chr19:15681432:T:C	rs77494139	T	C	C	Sox2_MA0143.3	20	0	-	0	0	.
chr19	15724287	15724288	chr19:15724288:G:T	rs7252197	G	T	-	Sox2_MA0143.3	8	0	-	0	0	.
chr19	15810743	15810744	chr19:15810744:A:G	rs76681337	A	G	A	Sox2_MA0143.3	15	0	+	0	0	.
chr19	15829415	15829416	chr19:15829416:G:C	rs11085994	G	C	g	Sox2_MA0143.3	12	0	-	0	0	.
chr19	15829860	15829861	chr19:15829861:C:T	rs4808389	C	T	-	Sox2_MA0143.3	-19	0	-	0	0	.
chr19	15836222	15836223	chr19:15836223:C:T	rs183578109	C	T	C	Sox2_MA0143.3	7	1	-	8.864090315184848	3.5547341015215945	CCTTTGTG
chr19	15836365	15836366	chr19:15836366:T:C	rs61308817	T	C	T	Sox2_MA0143.3	17	0	-	0	0	.
chr19	15837639	15837640	chr19:15837640:A:C	rs58430653	A	C	a	Sox2_MA0143.3	-8	0	-	0	0	.
chr19	16018705	16018706	chr19:16018706:T:C	rs8100133	T	C	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr19	16018719	16018720	chr19:16018720:C:T	rs10421374	C	T	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr19	16031178	16031179	chr19:16031179:A:G	rs1076262	A	G	G	Sox2_MA0143.3	9	0	-	0	0	.
chr19	16060456	16060457	chr19:16060457:A:G	rs8103615	A	G	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr19	16098386	16098387	chr19:16098387:C:G	rs76498125	C	G	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr19	16124558	16124559	chr19:16124559:G:A	rs58672212	G	A	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr19	16209978	16209979	chr19:16209979:T:C	rs6512091	T	C	C	Sox2_MA0143.3	14	0	+	0	0	.
chr19	16217117	16217118	chr19:16217118:G:A	rs285273	G	A	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr19	16221522	16221523	chr19:16221523:A:G	rs34434086	A	G	G	Sox2_MA0143.3	22	0	-	0	0	.
chr19	16296964	16296965	chr19:16296965:A:G	rs8104380	A	G	G	Sox2_MA0143.3	-2	0	+	0	0	.
chr19	16334625	16334626	chr19:16334626:T:G	rs61380623	T	G	T	Sox2_MA0143.3	-1	0	+	0	0	.
chr19	16447954	16447955	chr19:16447955:C:A	rs7256818	C	A	A	Sox2_MA0143.3	25	0	-	0	0	.
chr19	16449875	16449876	chr19:16449876:T:C	rs768399854	T	C	T	Sox2_MA0143.3	15	0	-	0	0	.
chr19	16588119	16588120	chr19:16588120:C:T	rs76391588	C	T	C	Sox2_MA0143.3	20	0	+	0	0	.
chr19	16779030	16779031	chr19:16779031:C:T	rs115420786	C	T	C	Sox2_MA0143.3	12	0	+	0	0	.
chr19	16814861	16814862	chr19:16814862:A:G	rs773890	A	G	A	Sox2_MA0143.3	2	1	+	8.676919043985553	2.5582713367092715	CCATTGTG
chr19	16849244	16849245	chr19:16849245:G:A	rs11879590	G	A	G	Sox2_MA0143.3	19	0	-	0	0	.
chr19	16998614	16998615	chr19:16998615:G:A	rs76961229	G	A	G	Sox2_MA0143.3	14	0	-	0	0	.
chr19	17024192	17024193	chr19:17024193:C:T	rs62126014	C	T	C	Sox2_MA0143.3	9	0	-	0	0	.
chr19	17026761	17026762	chr19:17026762:C:A	rs564519135	C	A	c	Sox2_MA0143.3	17	0	+	0	0	.
chr19	17113715	17113716	chr19:17113716:C:T	rs78352768	C	T	C	Sox2_MA0143.3	18	0	-	0	0	.
chr19	17205482	17205483	chr19:17205483:A:T	rs534975936	A	T	A	Sox2_MA0143.3	2	1	+	9.019595766176417	9.206767037375712	CCATTGTC
chr19	17244503	17244504	chr19:17244504:G:A	rs118043155	G	A	G	Sox2_MA0143.3	10	0	-	0	0	.
chr19	17291049	17291050	chr19:17291050:G:A	rs61494113	G	A	G	Sox2_MA0143.3	7	1	-	9.206767037375712	9.800647049772198	CCTTTGTC
chr19	17302137	17302138	chr19:17302138:T:C	rs35371421	T	C	C	Sox2_MA0143.3	25	0	+	0	0	.
chr19	17309424	17309425	chr19:17309425:G:A	rs752114883	G	A	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr19	17326685	17326686	chr19:17326686:G:A	rs951559821	G	A	G	Sox2_MA0143.3	0	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr19	17378427	17378428	chr19:17378428:A:G	rs117153043	A	G	G	Sox2_MA0143.3	19	0	+	0	0	.
chr19	17394386	17394387	chr19:17394387:T:G	rs11666304	T	G	T	Sox2_MA0143.3	6	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr19	17479326	17479327	chr19:17479327:A:G	rs369086407	A	G	a	Sox2_MA0143.3	-7	0	-	0	0	.
chr19	17508063	17508064	chr19:17508064:C:T	rs56990906	C	T	C	Sox2_MA0143.3	-20	0	-	0	0	.
chr19	17574323	17574324	chr19:17574324:T:C	rs4399659	T	C	T	Sox2_MA0143.3	11	0	+	0	0	.
chr19	17703980	17703981	chr19:17703981:T:C	rs11881134	T	C	T	Sox2_MA0143.3	-5	0	-	0	0	.
chr19	17750046	17750047	chr19:17750047:C:T	rs372698472	C	T	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr19	17797784	17797785	chr19:17797785:G:T	rs62123687	G	T	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr19	17864141	17864142	chr19:17864142:C:T	rs73922736	C	T	C	Sox2_MA0143.3	1	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr19	17949086	17949087	chr19:17949087:G:C	rs972999982	G	C	G	Sox2_MA0143.3	16	0	+	0	0	.
chr19	18053832	18053833	chr19:18053833:T:C	rs4808741	T	C	T	Sox2_MA0143.3	-8	0	-	0	0	.
chr19	18242468	18242469	chr19:18242469:C:T	rs79484355	C	T	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr19	18251909	18251910	chr19:18251910:G:A	rs77194252	G	A	G	Sox2_MA0143.3	27	0	-	0	0	.
chr19	18251922	18251923	chr19:18251923:A:G	rs111324274	A	G	G	Sox2_MA0143.3	14	0	-	0	0	.
chr19	18251930	18251931	chr19:18251931:A:G	rs56154436	A	G	A	Sox2_MA0143.3	6	1	-	9.019595766176417	2.110840986861197	CCATTGTC
chr19	18275252	18275253	chr19:18275253:G:A	rs10416600	G	A	A	Sox2_MA0143.3	-13	0	+	0	0	.
chr19	18322364	18322365	chr19:18322365:T:C	rs1035365	T	C	T	Sox2_MA0143.3	9	0	-	0	0	.
chr19	18385761	18385762	chr19:18385762:C:T	rs57573498	C	T	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr19	18500734	18500735	chr19:18500735:C:T	rs7249760	C	T	T	Sox2_MA0143.3	8	0	+	0	0	.
chr19	18580552	18580553	chr19:18580553:G:A	rs2079016	G	A	G	Sox2_MA0143.3	24	0	-	0	0	.
chr19	18592962	18592963	chr19:18592963:C:T	rs7252198	C	T	T	Sox2_MA0143.3	21	0	+	0	0	.
chr19	18606453	18606454	chr19:18606454:C:T	rs113093604	C	T	C	Sox2_MA0143.3	26	0	+	0	0	.
chr19	18610681	18610682	chr19:18610682:G:A	rs4808828	G	A	G	Sox2_MA0143.3	22	0	-	0	0	.
chr19	18725089	18725090	chr19:18725090:A:T	rs73537962	A	T	A	Sox2_MA0143.3	27	0	+	0	0	.
chr19	18726648	18726649	chr19:18726649:T:C	rs11881199	T	C	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr19	18757243	18757244	chr19:18757244:G:A	rs145375808	G	A	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr19	18757267	18757268	chr19:18757268:G:T	rs569574995	G	T	G	Sox2_MA0143.3	17	0	+	0	0	.
chr19	18782307	18782308	chr19:18782308:G:A	rs76936388	G	A	G	Sox2_MA0143.3	15	0	+	0	0	.
chr19	18795798	18795799	chr19:18795799:G:C	rs75778434	G	C	G	Sox2_MA0143.3	11	0	+	0	0	.
chr19	18941211	18941212	chr19:18941212:G:C	rs867746392	G	C	-	Sox2_MA0143.3	20	0	+	0	0	.
chr19	18941217	18941218	chr19:18941218:G:A	chr19:18941218:G:A	G	A	-	Sox2_MA0143.3	26	0	+	0	0	.
chr19	18949628	18949629	chr19:18949629:A:G	rs149888496	A	G	A	Sox2_MA0143.3	18	0	-	0	0	.
chr19	18969779	18969780	chr19:18969780:C:T	rs115887303	C	T	C	Sox2_MA0143.3	16	0	+	0	0	.
chr19	19033223	19033224	chr19:19033224:T:C	rs546767934	T	C	T	Sox2_MA0143.3	22	0	+	0	0	.
chr19	19113237	19113238	chr19:19113238:G:T	chr19:19113238:G:T	G	T	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr19	19143361	19143362	chr19:19143362:C:T	rs16995922	C	T	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr19	19192001	19192002	chr19:19192002:C:T	rs756224003	C	T	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr19	19192015	19192016	chr19:19192016:C:T	rs923649060	C	T	C	Sox2_MA0143.3	0	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr19	19275205	19275206	chr19:19275206:A:G	rs8103496	A	G	G	Sox2_MA0143.3	9	0	-	0	0	.
chr19	19367212	19367213	chr19:19367213:G:T	rs2905426	G	T	G	Sox2_MA0143.3	13	0	-	0	0	.
chr19	19367213	19367214	chr19:19367214:G:T	rs2905427	G	T	G	Sox2_MA0143.3	12	0	-	0	0	.
chr19	19367241	19367242	chr19:19367242:C:T	rs2965201	C	T	T	Sox2_MA0143.3	-16	0	-	0	0	.
chr19	19421094	19421095	chr19:19421095:C:T	rs74589577	C	T	C	Sox2_MA0143.3	9	0	-	0	0	.
chr19	19421100	19421101	chr19:19421101:A:G	rs11668386	A	G	A	Sox2_MA0143.3	3	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr19	19502571	19502572	chr19:19502572:G:A	rs892022	G	A	G	Sox2_MA0143.3	9	0	+	0	0	.
chr19	19549713	19549714	chr19:19549714:G:T	rs144661354	G	T	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr19	19578354	19578355	chr19:19578355:T:C	rs10412176	T	C	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr19	19578381	19578382	chr19:19578382:C:T	rs117316432	C	T	C	Sox2_MA0143.3	13	0	+	0	0	.
chr19	19652825	19652826	chr19:19652826:C:T	rs2288865	C	T	C	Sox2_MA0143.3	-5	0	-	0	0	.
chr19	19684750	19684751	chr19:19684751:C:A	rs7247433	C	A	A	Sox2_MA0143.3	-4	0	+	0	0	.
chr19	19750070	19750071	chr19:19750071:G:A	rs12976458	G	A	g	Sox2_MA0143.3	-7	0	+	0	0	.
chr19	19900939	19900940	chr19:19900940:T:G	chr19:19900940:T:G	T	G	-	Sox2_MA0143.3	-1	0	+	0	0	.
chr19	19900943	19900944	chr19:19900944:T:C	chr19:19900944:T:C	T	C	-	Sox2_MA0143.3	3	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr19	19900951	19900952	chr19:19900952:C:T	rs115942353	C	T	-	Sox2_MA0143.3	11	0	+	0	0	.
chr19	19900967	19900968	chr19:19900968:C:T	rs116238751	C	T	-	Sox2_MA0143.3	27	0	+	0	0	.
chr19	19958906	19958907	chr19:19958907:G:T	rs149819125	G	T	g	Sox2_MA0143.3	-20	0	-	0	0	.
chr19	20103718	20103719	chr19:20103719:G:A	rs1654265	G	A	.	Sox2_MA0143.3	-12	0	-	0	0	.
chr19	20166250	20166251	chr19:20166251:G:C	rs72998628	G	C	.	Sox2_MA0143.3	-10	0	+	0	0	.
chr19	20166250	20166251	chr19:20166251:G:T	chr19:20166251:G:T	G	T	.	Sox2_MA0143.3	-10	0	+	0	0	.
chr19	20167235	20167236	chr19:20167236:C:T	chr19:20167236:C:T	C	T	.	Sox2_MA0143.3	27	0	+	0	0	.
chr19	20238457	20238458	chr19:20238458:G:A	rs540703759	G	A	g	Sox2_MA0143.3	-19	0	-	0	0	.
chr19	20279604	20279605	chr19:20279605:C:G	rs148205996	C	G	.	Sox2_MA0143.3	7	1	+	9.019595766176417	8.676919043985553	CCATTGTC
chr19	20279679	20279680	chr19:20279680:G:A	rs12459395	G	A	.	Sox2_MA0143.3	13	0	+	0	0	.
chr19	20279680	20279681	chr19:20279681:G:C	rs36016750	G	C	.	Sox2_MA0143.3	14	0	+	0	0	.
chr19	20358089	20358090	chr19:20358090:A:G	rs8112271	A	G	.	Sox2_MA0143.3	6	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr19	20424932	20424933	chr19:20424933:A:G	rs116097091	A	G	.	Sox2_MA0143.3	3	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr19	20561506	20561507	chr19:20561507:G:T	rs12984601	G	T	.	Sox2_MA0143.3	22	0	-	0	0	.
chr19	20561532	20561533	chr19:20561533:G:C	rs1426699650	G	C	.	Sox2_MA0143.3	-4	0	-	0	0	.
chr19	20661554	20661555	chr19:20661555:T:C	rs7253399	T	C	.	Sox2_MA0143.3	21	0	-	0	0	.
chr19	20661585	20661586	chr19:20661586:A:G	rs10413287	A	G	.	Sox2_MA0143.3	-10	0	-	0	0	.
chr19	20747636	20747637	chr19:20747637:C:G	rs59417151	C	G	-	Sox2_MA0143.3	1	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr19	20775362	20775363	chr19:20775363:C:A	rs7247446	C	A	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr19	20858004	20858005	chr19:20858005:T:C	rs35932444	T	C	T	Sox2_MA0143.3	6	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr19	20897662	20897663	chr19:20897663:A:C	rs73007061	A	C	-	Sox2_MA0143.3	-19	0	-	0	0	.
chr19	20910939	20910940	chr19:20910940:A:G	rs77507705	A	G	A	Sox2_MA0143.3	-11	0	-	0	0	.
chr19	20923242	20923243	chr19:20923243:G:A	chr19:20923243:G:A	G	A	G	Sox2_MA0143.3	-9	0	+	0	0	.
chr19	20999922	20999923	chr19:20999923:T:G	rs563261304	T	G	T	Sox2_MA0143.3	-10	0	+	0	0	.
chr19	20999952	20999953	chr19:20999953:T:C	rs58002329	T	C	C	Sox2_MA0143.3	20	0	+	0	0	.
chr19	21142051	21142052	chr19:21142052:A:G	chr19:21142052:A:G	A	G	A	Sox2_MA0143.3	17	0	+	0	0	.
chr19	21142053	21142054	chr19:21142054:C:T	chr19:21142054:C:T	C	T	C	Sox2_MA0143.3	19	0	+	0	0	.
chr19	21147032	21147033	chr19:21147033:T:C	rs7250987	T	C	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr19	21294600	21294601	chr19:21294601:T:G	rs1781872	T	G	t	Sox2_MA0143.3	3	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr19	21323510	21323511	chr19:21323511:T:C	rs489613	T	C	.	Sox2_MA0143.3	-13	0	+	0	0	.
chr19	21329379	21329380	chr19:21329380:C:T	rs1188778088	C	T	.	Sox2_MA0143.3	-20	0	-	0	0	.
chr19	21397120	21397121	chr19:21397121:T:G	rs576049999	T	G	.	Sox2_MA0143.3	-10	0	+	0	0	.
chr19	21451382	21451383	chr19:21451383:C:T	rs8102655	C	T	C	Sox2_MA0143.3	13	0	+	0	0	.
chr19	21474818	21474819	chr19:21474819:G:A	rs538041612	G	A	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr19	21474853	21474854	chr19:21474854:T:C	rs1027586	T	C	T	Sox2_MA0143.3	15	0	+	0	0	.
chr19	21474857	21474858	chr19:21474858:A:C	rs182086947	A	C	A	Sox2_MA0143.3	19	0	+	0	0	.
chr19	21500832	21500833	chr19:21500833:T:A	rs1021722	T	A	T	Sox2_MA0143.3	26	0	+	0	0	.
chr19	21505670	21505671	chr19:21505671:C:A	rs62108288	C	A	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr19	21505692	21505693	chr19:21505693:C:T	rs73017722	C	T	C	Sox2_MA0143.3	16	0	+	0	0	.
chr19	21513711	21513712	chr19:21513712:A:G	rs2650830	A	G	A	Sox2_MA0143.3	-19	0	+	0	0	.
chr19	21563577	21563578	chr19:21563578:C:T	rs55771551	C	T	.	Sox2_MA0143.3	-2	0	-	0	0	.
chr19	21568645	21568646	chr19:21568646:T:C	rs10854050	T	C	.	Sox2_MA0143.3	3	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr19	21569206	21569207	chr19:21569207:A:G	rs4808279	A	G	.	Sox2_MA0143.3	25	0	-	0	0	.
chr19	21569220	21569221	chr19:21569221:C:G	rs73025877	C	G	.	Sox2_MA0143.3	11	0	-	0	0	.
chr19	21570368	21570369	chr19:21570369:A:G	rs73929332	A	G	.	Sox2_MA0143.3	25	0	-	0	0	.
chr19	21570399	21570400	chr19:21570400:A:C	rs77547293	A	C	.	Sox2_MA0143.3	-6	0	-	0	0	.
chr19	21600055	21600056	chr19:21600056:G:T	rs57879343	G	T	.	Sox2_MA0143.3	18	0	+	0	0	.
chr19	21622165	21622166	chr19:21622166:A:G	rs7255865	A	G	.	Sox2_MA0143.3	-15	0	-	0	0	.
chr19	21750739	21750740	chr19:21750740:G:A	rs140100893	G	A	.	Sox2_MA0143.3	-18	0	+	0	0	.
chr19	21877648	21877649	chr19:21877649:T:C	rs111306349	T	C	t	Sox2_MA0143.3	11	0	+	0	0	.
chr19	22492615	22492616	chr19:22492616:C:A	rs1230313	C	A	a	Sox2_MA0143.3	25	0	+	0	0	.
chr19	22520417	22520418	chr19:22520418:T:C	rs1216105	T	C	c	Sox2_MA0143.3	14	0	-	0	0	.
chr19	22619580	22619581	chr19:22619581:A:G	rs10403670	A	G	.	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr19	22917828	22917829	chr19:22917829:A:G	rs59356390	A	G	.	Sox2_MA0143.3	25	0	-	0	0	.
chr19	22935596	22935597	chr19:22935597:T:C	rs289362	T	C	.	Sox2_MA0143.3	14	0	+	0	0	.
chr19	23049682	23049683	chr19:23049683:T:A	rs2927368	T	A	-	Sox2_MA0143.3	22	0	+	0	0	.
chr19	23117012	23117013	chr19:23117013:G:T	rs62122971	G	T	-	Sox2_MA0143.3	-13	0	+	0	0	.
chr19	23117024	23117025	chr19:23117025:G:C	rs370563059	G	C	-	Sox2_MA0143.3	-1	0	+	0	0	.
chr19	23247429	23247430	chr19:23247430:T:C	rs10410902	T	C	-	Sox2_MA0143.3	24	0	-	0	0	.
chr19	23250384	23250385	chr19:23250385:A:G	rs567543804	A	G	-	Sox2_MA0143.3	8	0	-	0	0	.
chr19	23315139	23315140	chr19:23315140:C:G	rs7245954	C	G	-	Sox2_MA0143.3	-16	0	+	0	0	.
chr19	23385624	23385625	chr19:23385625:G:A	rs55876416	G	A	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr19	23385625	23385626	chr19:23385626:T:C	rs12978950	T	C	A	Sox2_MA0143.3	-9	0	-	0	0	.
chr19	23395462	23395463	chr19:23395463:G:A	rs967236617	G	A	G	Sox2_MA0143.3	13	0	-	0	0	.
chr19	23507738	23507739	chr19:23507739:A:C	rs2364165	A	C	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr19	23571422	23571423	chr19:23571423:A:C	rs8111474	A	C	a	Sox2_MA0143.3	17	0	+	0	0	.
chr19	23687191	23687192	chr19:23687192:A:C	rs888803210	A	C	A	Sox2_MA0143.3	-10	0	-	0	0	.
chr19	23774507	23774508	chr19:23774508:G:T	rs7508695	G	T	T	Sox2_MA0143.3	-18	0	+	0	0	.
chr19	23774521	23774522	chr19:23774522:G:C	rs7508696	G	C	g	Sox2_MA0143.3	-4	0	+	0	0	.
chr19	23774958	23774959	chr19:23774959:A:G	rs6511540	A	G	A	Sox2_MA0143.3	-1	0	+	0	0	.
chr19	23774959	23774960	chr19:23774960:C:T	rs6511541	C	T	T	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr19	23776305	23776306	chr19:23776306:C:T	rs8106810	C	T	T	Sox2_MA0143.3	-1	0	+	0	0	.
chr19	23817647	23817648	chr19:23817648:G:A	rs117613729	G	A	g	Sox2_MA0143.3	-5	0	-	0	0	.
chr19	23872740	23872741	chr19:23872741:G:T	rs148467455	G	T	g	Sox2_MA0143.3	0	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr19	24033461	24033462	chr19:24033462:T:C	rs181893032	T	C	T	Sox2_MA0143.3	6	1	+	9.206767037375712	2.298012258060492	CCTTTGTC
chr19	24049734	24049735	chr19:24049735:C:T	rs62113759	C	T	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr19	24192697	24192698	chr19:24192698:A:T	rs58437852	A	T	.	Sox2_MA0143.3	-13	0	+	0	0	.
chr19	24231661	24231662	chr19:24231662:T:A	rs1852407	T	A	.	Sox2_MA0143.3	16	0	+	0	0	.
chr19	27241669	27241670	chr19:27241670:A:G	rs200653047	A	G	.	Sox2_MA0143.3	-7	0	+	0	0	.
chr19	27352142	27352143	chr19:27352143:G:A	rs78006382	G	A	.	Sox2_MA0143.3	-20	0	-	0	0	.
chr19	27356408	27356409	chr19:27356409:A:G	rs57084680	A	G	.	Sox2_MA0143.3	-10	0	-	0	0	.
chr19	27392638	27392639	chr19:27392639:G:T	rs113040402	G	T	.	Sox2_MA0143.3	-19	0	-	0	0	.
chr19	27682896	27682897	chr19:27682897:G:A	rs73016678	G	A	.	Sox2_MA0143.3	17	0	-	0	0	.
chr19	27805271	27805272	chr19:27805272:T:C	rs11084680	T	C	t	Sox2_MA0143.3	-7	0	-	0	0	.
chr19	27805681	27805682	chr19:27805682:A:C	rs4530273	A	C	c	Sox2_MA0143.3	-10	0	-	0	0	.
chr19	27894892	27894893	chr19:27894893:C:G	rs6510399	C	G	C	Sox2_MA0143.3	11	0	-	0	0	.
chr19	27900166	27900167	chr19:27900167:C:G	rs17687812	C	G	C	Sox2_MA0143.3	14	0	-	0	0	.
chr19	27945032	27945033	chr19:27945033:A:C	rs537660265	A	C	a	Sox2_MA0143.3	18	0	+	0	0	.
chr19	28026183	28026184	chr19:28026184:A:G	rs10407395	A	G	A	Sox2_MA0143.3	17	0	-	0	0	.
chr19	28096626	28096627	chr19:28096627:A:G	rs9973221	A	G	A	Sox2_MA0143.3	20	0	-	0	0	.
chr19	28187780	28187781	chr19:28187781:G:A	rs79955216	G	A	G	Sox2_MA0143.3	11	0	-	0	0	.
chr19	28242464	28242465	chr19:28242465:A:G	rs7249972	A	G	G	Sox2_MA0143.3	19	0	-	0	0	.
chr19	28301440	28301441	chr19:28301441:C:T	rs62117316	C	T	C	Sox2_MA0143.3	14	0	-	0	0	.
chr19	28316161	28316162	chr19:28316162:G:A	rs12151045	G	A	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr19	28411351	28411352	chr19:28411352:A:C	rs10407317	A	C	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr19	28414753	28414754	chr19:28414754:C:T	rs4806388	C	T	T	Sox2_MA0143.3	24	0	+	0	0	.
chr19	28417683	28417684	chr19:28417684:C:T	rs62105513	C	T	C	Sox2_MA0143.3	21	0	+	0	0	.
chr19	28475377	28475378	chr19:28475378:A:G	rs6508872	A	G	A	Sox2_MA0143.3	9	0	-	0	0	.
chr19	28489981	28489982	chr19:28489982:C:T	rs758345	C	T	T	Sox2_MA0143.3	27	0	+	0	0	.
chr19	28497283	28497284	chr19:28497284:A:T	rs73012840	A	T	A	Sox2_MA0143.3	8	0	-	0	0	.
chr19	28549957	28549958	chr19:28549958:G:A	rs11666297	G	A	A	Sox2_MA0143.3	-7	0	+	0	0	.
chr19	28549987	28549988	chr19:28549988:A:G	rs117571108	A	G	A	Sox2_MA0143.3	23	0	+	0	0	.
chr19	28754300	28754301	chr19:28754301:T:G	rs12609841	T	G	G	Sox2_MA0143.3	8	0	+	0	0	.
chr19	28880270	28880271	chr19:28880271:A:G	rs116358993	A	G	A	Sox2_MA0143.3	9	0	+	0	0	.
chr19	28908172	28908173	chr19:28908173:C:T	rs34194008	C	T	C	Sox2_MA0143.3	18	0	-	0	0	.
chr19	28926222	28926223	chr19:28926223:A:G	rs4258733	A	G	G	Sox2_MA0143.3	20	0	-	0	0	.
chr19	29086322	29086323	chr19:29086323:G:A	rs17716275	G	A	G	Sox2_MA0143.3	15	0	+	0	0	.
chr19	29278655	29278656	chr19:29278656:T:C	rs10407731	T	C	C	Sox2_MA0143.3	2	1	+	9.800647049772198	3.494828071296623	CCTTTGTT
chr19	29291753	29291754	chr19:29291754:T:C	rs10425709	T	C	C	Sox2_MA0143.3	-20	0	-	0	0	.
chr19	29302169	29302170	chr19:29302170:G:A	rs8102600	G	A	G	Sox2_MA0143.3	0	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr19	29334306	29334307	chr19:29334307:G:A	rs1122022	G	A	G	Sox2_MA0143.3	1	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr19	29408767	29408768	chr19:29408768:G:A	rs12460899	G	A	G	Sox2_MA0143.3	-14	0	+	0	0	.
chr19	29482704	29482705	chr19:29482705:C:T	rs4805421	C	T	C	Sox2_MA0143.3	23	0	+	0	0	.
chr19	29507232	29507233	chr19:29507233:G:A	rs150087919	G	A	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr19	29509376	29509377	chr19:29509377:T:G	rs75710947	T	G	T	Sox2_MA0143.3	22	0	-	0	0	.
chr19	29509737	29509738	chr19:29509738:T:C	rs11879059	T	C	C	Sox2_MA0143.3	3	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr19	29548855	29548856	chr19:29548856:A:G	rs538772223	A	G	A	Sox2_MA0143.3	25	0	-	0	0	.
chr19	29561040	29561041	chr19:29561041:A:G	rs140569923	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr19	29584312	29584313	chr19:29584313:A:T	rs57126483	A	T	T	Sox2_MA0143.3	-6	0	-	0	0	.
chr19	29672538	29672539	chr19:29672539:G:A	rs73024199	G	A	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr19	29683157	29683158	chr19:29683158:C:A	rs16963125	C	A	C	Sox2_MA0143.3	16	0	-	0	0	.
chr19	29723120	29723121	chr19:29723121:C:T	rs34716192	C	T	C	Sox2_MA0143.3	21	0	-	0	0	.
chr19	29724505	29724506	chr19:29724506:C:T	rs78201215	C	T	C	Sox2_MA0143.3	-20	0	-	0	0	.
chr19	29760062	29760063	chr19:29760063:T:G	rs4805474	T	G	G	Sox2_MA0143.3	6	1	+	8.676919043985553	1.7681642646703326	CCATTGTG
chr19	29764919	29764920	chr19:29764920:G:A	rs144704386	G	A	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr19	29828842	29828843	chr19:29828843:A:G	rs8103402	A	G	A	Sox2_MA0143.3	10	0	-	0	0	.
chr19	29856286	29856287	chr19:29856287:G:C	rs139336895	G	C	G	Sox2_MA0143.3	1	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr19	29861981	29861982	chr19:29861982:C:T	rs67728770	C	T	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr19	29924411	29924412	chr19:29924412:T:C	rs334996	T	C	c	Sox2_MA0143.3	3	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr19	29941294	29941295	chr19:29941295:G:A	rs58563661	G	A	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr19	30064933	30064934	chr19:30064934:C:T	rs745633	C	T	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr19	30194599	30194600	chr19:30194600:G:A	rs10418548	G	A	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr19	30293692	30293693	chr19:30293693:G:A	rs553240049	G	A	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr19	30330396	30330397	chr19:30330397:A:G	rs1347168	A	G	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr19	30362744	30362745	chr19:30362745:C:T	rs113356685	C	T	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr19	30443227	30443228	chr19:30443228:C:T	rs62103362	C	T	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr19	30501731	30501732	chr19:30501732:A:C	rs1004046	A	C	C	Sox2_MA0143.3	17	0	-	0	0	.
chr19	30506512	30506513	chr19:30506513:C:G	rs12461746	C	G	G	Sox2_MA0143.3	-12	0	+	0	0	.
chr19	30694302	30694303	chr19:30694303:T:C	rs16964543	T	C	C	Sox2_MA0143.3	-12	0	-	0	0	.
chr19	30731955	30731956	chr19:30731956:G:C	rs4805608	G	C	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr19	30786940	30786941	chr19:30786941:G:T	rs77430464	G	T	g	Sox2_MA0143.3	-15	0	-	0	0	.
chr19	30850663	30850664	chr19:30850664:T:C	rs10409390	T	C	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr19	30926688	30926689	chr19:30926689:G:A	rs139056768	G	A	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr19	31020147	31020148	chr19:31020148:A:G	rs276728	A	G	G	Sox2_MA0143.3	10	0	+	0	0	.
chr19	31054500	31054501	chr19:31054501:C:T	rs539096267	C	T	c	Sox2_MA0143.3	21	0	+	0	0	.
chr19	31057576	31057577	chr19:31057577:C:T	rs77807677	C	T	C	Sox2_MA0143.3	15	0	-	0	0	.
chr19	31144405	31144406	chr19:31144406:A:G	rs4805644	A	G	A	Sox2_MA0143.3	4	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr19	31209933	31209934	chr19:31209934:A:G	rs10420755	A	G	G	Sox2_MA0143.3	3	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr19	31224159	31224160	chr19:31224160:C:T	rs4804957	C	T	C	Sox2_MA0143.3	10	0	+	0	0	.
chr19	31308247	31308248	chr19:31308248:C:A	rs7245738	C	A	A	Sox2_MA0143.3	15	0	-	0	0	.
chr19	31337581	31337582	chr19:31337582:A:G	rs8110978	A	G	G	Sox2_MA0143.3	19	0	+	0	0	.
chr19	31338379	31338380	chr19:31338380:T:C	rs3760828	T	C	T	Sox2_MA0143.3	12	0	-	0	0	.
chr19	31338384	31338385	chr19:31338385:C:T	rs559639247	C	T	C	Sox2_MA0143.3	7	1	-	8.864090315184848	3.5547341015215945	CCTTTGTG
chr19	31465970	31465971	chr19:31465971:C:T	rs67398703	C	T	c	Sox2_MA0143.3	-12	0	-	0	0	.
chr19	31501542	31501543	chr19:31501543:G:A	rs918584	G	A	G	Sox2_MA0143.3	21	0	+	0	0	.
chr19	31505881	31505882	chr19:31505882:G:A	rs11878635	G	A	G	Sox2_MA0143.3	1	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr19	31532312	31532313	chr19:31532313:G:T	rs570186374	G	T	G	Sox2_MA0143.3	9	0	-	0	0	.
chr19	31536276	31536277	chr19:31536277:C:T	rs73561077	C	T	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr19	31545935	31545936	chr19:31545936:C:T	rs2194199	C	T	C	Sox2_MA0143.3	13	0	+	0	0	.
chr19	31838559	31838560	chr19:31838560:G:A	rs774364105	G	A	G	Sox2_MA0143.3	-9	0	+	0	0	.
chr19	31955297	31955298	chr19:31955298:A:G	rs55793252	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr19	32023668	32023669	chr19:32023669:G:C	rs60471605	G	C	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr19	32037313	32037314	chr19:32037314:A:T	rs180879135	A	T	A	Sox2_MA0143.3	-7	0	-	0	0	.
chr19	32046787	32046788	chr19:32046788:G:A	rs2240663	G	A	A	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr19	32053698	32053699	chr19:32053699:G:T	rs189183715	G	T	G	Sox2_MA0143.3	15	0	+	0	0	.
chr19	32079259	32079260	chr19:32079260:C:T	rs73571117	C	T	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr19	32099037	32099038	chr19:32099038:G:T	rs75072533	G	T	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr19	32185194	32185195	chr19:32185195:A:T	rs12978283	A	T	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr19	32201959	32201960	chr19:32201960:C:A	rs57996593	C	A	C	Sox2_MA0143.3	10	0	-	0	0	.
chr19	32201986	32201987	chr19:32201987:T:C	rs116828697	T	C	T	Sox2_MA0143.3	-17	0	-	0	0	.
chr19	32343820	32343821	chr19:32343821:A:G	rs73565309	A	G	A	Sox2_MA0143.3	15	0	-	0	0	.
chr19	32565687	32565688	chr19:32565688:T:C	rs7259049	T	C	T	Sox2_MA0143.3	16	0	+	0	0	.
chr19	32565688	32565689	chr19:32565689:G:A	rs117163825	G	A	G	Sox2_MA0143.3	17	0	+	0	0	.
chr19	32629358	32629359	chr19:32629359:T:C	rs4805786	T	C	T	Sox2_MA0143.3	-12	0	-	0	0	.
chr19	32631781	32631782	chr19:32631782:G:A	rs79731708	G	A	G	Sox2_MA0143.3	-9	0	+	0	0	.
chr19	32631817	32631818	chr19:32631818:T:C	rs145349747	T	C	T	Sox2_MA0143.3	27	0	+	0	0	.
chr19	32677505	32677506	chr19:32677506:C:T	rs259293	C	T	T	Sox2_MA0143.3	20	0	-	0	0	.
chr19	32691712	32691713	chr19:32691713:G:A	rs567024905	G	A	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr19	32793343	32793344	chr19:32793344:G:A	rs74834050	G	A	G	Sox2_MA0143.3	13	0	+	0	0	.
chr19	32811916	32811917	chr19:32811917:C:T	rs11670513	C	T	T	Sox2_MA0143.3	27	0	-	0	0	.
chr19	32847814	32847815	chr19:32847815:C:T	rs9749157	C	T	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr19	32871354	32871355	chr19:32871355:A:G	rs6510302	A	G	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr19	32874279	32874280	chr19:32874280:T:C	rs9304839	T	C	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr19	32877386	32877387	chr19:32877387:C:T	rs11670695	C	T	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr19	32878704	32878705	chr19:32878705:C:A	rs11671966	C	A	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr19	32977503	32977504	chr19:32977504:C:A	rs35310199	C	A	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr19	32977530	32977531	chr19:32977531:C:G	rs545797133	C	G	C	Sox2_MA0143.3	20	0	+	0	0	.
chr19	33070178	33070179	chr19:33070179:G:A	rs77013370	G	A	G	Sox2_MA0143.3	26	0	-	0	0	.
chr19	33172282	33172283	chr19:33172283:T:G	rs10422125	T	G	T	Sox2_MA0143.3	-7	0	+	0	0	.
chr19	33195345	33195346	chr19:33195346:C:T	rs551910720	C	T	C	Sox2_MA0143.3	0	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr19	33273811	33273812	chr19:33273812:A:G	rs10420798	A	G	A	Sox2_MA0143.3	-8	0	+	0	0	.
chr19	33273816	33273817	chr19:33273817:C:T	rs11672621	C	T	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr19	33273819	33273820	chr19:33273820:C:G	rs11672623	C	G	A	Sox2_MA0143.3	0	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr19	33278106	33278107	chr19:33278107:G:A	rs11084721	G	A	A	Sox2_MA0143.3	9	0	-	0	0	.
chr19	33291283	33291284	chr19:33291284:A:T	rs73926294	A	T	A	Sox2_MA0143.3	-17	0	-	0	0	.
chr19	33295348	33295349	chr19:33295349:C:T	rs149002152	C	T	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr19	33296134	33296135	chr19:33296135:G:A	rs8101436	G	A	A	Sox2_MA0143.3	16	0	-	0	0	.
chr19	33304595	33304596	chr19:33304596:G:C	rs62126641	G	C	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr19	33322869	33322870	chr19:33322870:G:A	rs10402014	G	A	A	Sox2_MA0143.3	14	0	-	0	0	.
chr19	33395738	33395739	chr19:33395739:A:G	rs7258863	A	G	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr19	33398093	33398094	chr19:33398094:G:A	rs889140	G	A	A	Sox2_MA0143.3	-11	0	-	0	0	.
chr19	33408871	33408872	chr19:33408872:C:T	rs8100424	C	T	T	Sox2_MA0143.3	-2	0	-	0	0	.
chr19	33420798	33420799	chr19:33420799:T:C	rs57457691	T	C	C	Sox2_MA0143.3	26	0	-	0	0	.
chr19	33438722	33438723	chr19:33438723:C:T	rs73035067	C	T	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr19	33439437	33439438	chr19:33439438:C:T	rs73035072	C	T	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr19	33447893	33447894	chr19:33447894:C:T	rs7258937	C	T	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr19	33453049	33453050	chr19:33453050:G:A	rs80129593	G	A	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr19	33453058	33453059	chr19:33453059:C:T	rs11668923	C	T	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr19	33471670	33471671	chr19:33471671:A:T	rs117524293	A	T	A	Sox2_MA0143.3	-20	0	-	0	0	.
chr19	33503808	33503809	chr19:33503809:G:A	rs55662095	G	A	G	Sox2_MA0143.3	22	0	-	0	0	.
chr19	33518825	33518826	chr19:33518826:G:A	rs33838	G	A	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr19	33520990	33520991	chr19:33520991:A:T	rs76034044	A	T	A	Sox2_MA0143.3	-8	0	+	0	0	.
chr19	33580963	33580964	chr19:33580964:G:A	rs118033350	G	A	G	Sox2_MA0143.3	-9	0	+	0	0	.
chr19	33689845	33689846	chr19:33689846:T:C	rs73033152	T	C	T	Sox2_MA0143.3	-14	0	-	0	0	.
chr19	33723824	33723825	chr19:33723825:G:T	rs17227533	G	T	T	Sox2_MA0143.3	-1	0	+	0	0	.
chr19	33759294	33759295	chr19:33759295:A:C	rs11084750	A	C	A	Sox2_MA0143.3	-7	0	-	0	0	.
chr19	33797135	33797136	chr19:33797136:G:C	rs7259858	G	C	G	Sox2_MA0143.3	19	0	-	0	0	.
chr19	33797140	33797141	chr19:33797141:T:G	chr19:33797141:T:G	T	G	C	Sox2_MA0143.3	14	0	-	0	0	.
chr19	33820746	33820747	chr19:33820747:G:A	rs34115117	G	A	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr19	33868428	33868429	chr19:33868429:C:A	rs8103074	C	A	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr19	33873217	33873218	chr19:33873218:A:G	rs7247921	A	G	G	Sox2_MA0143.3	22	0	-	0	0	.
chr19	34254159	34254160	chr19:34254160:T:C	rs185583631	T	C	T	Sox2_MA0143.3	8	0	-	0	0	.
chr19	34254179	34254180	chr19:34254180:T:C	chr19:34254180:T:C	T	C	T	Sox2_MA0143.3	-12	0	-	0	0	.
chr19	34296287	34296288	chr19:34296288:C:T	rs1993114	C	T	C	Sox2_MA0143.3	1	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr19	34537488	34537489	chr19:34537489:A:C	rs118101088	A	C	A	Sox2_MA0143.3	17	0	+	0	0	.
chr19	34589674	34589675	chr19:34589675:C:T	rs11671693	C	T	C	Sox2_MA0143.3	0	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr19	34663376	34663377	chr19:34663377:A:G	rs149511866	A	G	A	Sox2_MA0143.3	-4	0	-	0	0	.
chr19	34676567	34676568	chr19:34676568:T:C	rs115971260	T	C	T	Sox2_MA0143.3	-14	0	-	0	0	.
chr19	34733916	34733917	chr19:34733917:T:C	rs8111475	T	C	T	Sox2_MA0143.3	-11	0	+	0	0	.
chr19	34785612	34785613	chr19:34785613:T:A	rs17626324	T	A	T	Sox2_MA0143.3	25	0	+	0	0	.
chr19	34807442	34807443	chr19:34807443:T:G	rs11084787	T	G	T	Sox2_MA0143.3	-10	0	-	0	0	.
chr19	34825462	34825463	chr19:34825463:C:G	rs918448	C	G	c	Sox2_MA0143.3	-1	0	-	0	0	.
chr19	34943333	34943334	chr19:34943334:A:G	rs1811	A	G	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr19	34943533	34943534	chr19:34943534:G:A	rs8100497	G	A	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr19	34979594	34979595	chr19:34979595:C:T	rs142375688	C	T	C	Sox2_MA0143.3	9	0	-	0	0	.
chr19	34995110	34995111	chr19:34995111:T:G	rs7253477	T	G	T	Sox2_MA0143.3	13	0	+	0	0	.
chr19	35001499	35001500	chr19:35001500:G:A	rs185505678	G	A	A	Sox2_MA0143.3	-3	0	+	0	0	.
chr19	35069045	35069046	chr19:35069046:G:T	rs1688026	G	T	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr19	35074102	35074103	chr19:35074103:C:T	rs8103371	C	T	C	Sox2_MA0143.3	9	0	-	0	0	.
chr19	35233065	35233066	chr19:35233066:A:G	rs118186466	A	G	A	Sox2_MA0143.3	22	0	+	0	0	.
chr19	35240508	35240509	chr19:35240509:C:G	rs773832830	C	G	c	Sox2_MA0143.3	24	0	+	0	0	.
chr19	35292054	35292055	chr19:35292055:C:T	rs2301599	C	T	C	Sox2_MA0143.3	19	0	+	0	0	.
chr19	35449818	35449819	chr19:35449819:G:C	rs117215242	G	C	G	Sox2_MA0143.3	13	0	+	0	0	.
chr19	35501540	35501541	chr19:35501541:C:T	rs75529181	C	T	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr19	35513059	35513060	chr19:35513060:T:C	rs7247001	T	C	t	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr19	35745218	35745219	chr19:35745219:A:G	rs231597	A	G	G	Sox2_MA0143.3	17	0	-	0	0	.
chr19	35774083	35774084	chr19:35774084:G:C	rs807484	G	C	C	Sox2_MA0143.3	5	1	+	9.019595766176417	2.110840986861197	CCATTGTC
chr19	35827180	35827181	chr19:35827181:T:C	rs35677801	T	C	T	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr19	35859570	35859571	chr19:35859571:C:G	chr19:35859571:C:G	C	G	C	Sox2_MA0143.3	11	0	+	0	0	.
chr19	35954028	35954029	chr19:35954029:G:A	rs57250854	G	A	G	Sox2_MA0143.3	26	0	+	0	0	.
chr19	36052510	36052511	chr19:36052511:T:G	rs7250448	T	G	G	Sox2_MA0143.3	9	0	+	0	0	.
chr19	36140437	36140438	chr19:36140438:C:G	rs533276256	C	G	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr19	36157331	36157332	chr19:36157332:A:C	rs575728	A	C	A	Sox2_MA0143.3	-2	0	-	0	0	.
chr19	36164028	36164029	chr19:36164029:G:A	rs62113079	G	A	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr19	36347137	36347138	chr19:36347138:T:G	rs55825342	T	G	T	Sox2_MA0143.3	22	0	+	0	0	.
chr19	36719626	36719627	chr19:36719627:A:G	rs3108200	A	G	A	Sox2_MA0143.3	-20	0	+	0	0	.
chr19	36772090	36772091	chr19:36772091:G:A	rs35127048	G	A	G	Sox2_MA0143.3	26	0	-	0	0	.
chr19	36916948	36916949	chr19:36916949:T:C	rs10424415	T	C	T	Sox2_MA0143.3	-11	0	+	0	0	.
chr19	37010015	37010016	chr19:37010016:G:A	rs703530	G	A	A	Sox2_MA0143.3	9	0	+	0	0	.
chr19	37015259	37015260	chr19:37015260:C:T	rs10401561	C	T	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr19	37064217	37064218	chr19:37064218:T:C	rs10407265	T	C	T	Sox2_MA0143.3	4	1	+	3.5547341015215945	-3.3540206777936254	CCTTTGTA
chr19	37469300	37469301	chr19:37469301:C:T	rs561251259	C	T	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr19	37469302	37469303	chr19:37469303:G:A	rs760887094	G	A	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr19	37469314	37469315	chr19:37469315:G:A	rs368374018	G	A	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr19	37719233	37719234	chr19:37719234:C:T	rs73039009	C	T	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr19	37719599	37719600	chr19:37719600:G:A	rs201855861	G	A	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr19	37719609	37719610	chr19:37719610:T:G	rs2972437	T	G	G	Sox2_MA0143.3	6	1	+	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr19	37817898	37817899	chr19:37817899:C:T	rs1302871517	C	T	c	Sox2_MA0143.3	-11	0	+	0	0	.
chr19	37864489	37864490	chr19:37864490:G:C	rs4803536	G	C	C	Sox2_MA0143.3	1	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr19	37900685	37900686	chr19:37900686:A:C	rs75927060	A	C	A	Sox2_MA0143.3	-3	0	-	0	0	.
chr19	37932276	37932277	chr19:37932277:G:A	rs62112287	G	A	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr19	37969013	37969014	chr19:37969014:A:G	rs1643466	A	G	A	Sox2_MA0143.3	3	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr19	37978443	37978444	chr19:37978444:C:A	rs833898	C	A	A	Sox2_MA0143.3	12	0	-	0	0	.
chr19	38003765	38003766	chr19:38003766:G:A	rs144196689	G	A	G	Sox2_MA0143.3	27	0	+	0	0	.
chr19	38188976	38188977	chr19:38188977:C:A	rs568255954	C	A	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr19	38216348	38216349	chr19:38216349:G:A	rs2278431	G	A	G	Sox2_MA0143.3	-14	0	+	0	0	.
chr19	38223055	38223056	chr19:38223056:A:G	rs2278435	A	G	A	Sox2_MA0143.3	12	0	-	0	0	.
chr19	38228475	38228476	chr19:38228476:G:A	rs546883318	G	A	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr19	38228488	38228489	chr19:38228489:C:G	rs535104765	C	G	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr19	38228513	38228514	chr19:38228514:T:C	rs974528608	T	C	T	Sox2_MA0143.3	23	0	+	0	0	.
chr19	38230115	38230116	chr19:38230116:G:C	rs143944138	G	C	G	Sox2_MA0143.3	-12	0	+	0	0	.
chr19	38417961	38417962	chr19:38417962:G:A	rs80129558	G	A	G	Sox2_MA0143.3	18	0	-	0	0	.
chr19	38417962	38417963	chr19:38417963:A:C	rs77888589	A	C	A	Sox2_MA0143.3	17	0	-	0	0	.
chr19	38429733	38429734	chr19:38429734:A:G	rs139319841	A	G	A	Sox2_MA0143.3	27	0	-	0	0	.
chr19	38429741	38429742	chr19:38429742:C:A	rs2043299	C	A	A	Sox2_MA0143.3	19	0	-	0	0	.
chr19	38429753	38429754	chr19:38429754:T:C	rs16972591	T	C	C	Sox2_MA0143.3	7	1	-	3.5547341015215945	8.864090315184848	CCTTTGTA
chr19	38529919	38529920	chr19:38529920:T:G	rs74716784	T	G	G	Sox2_MA0143.3	-3	0	+	0	0	.
chr19	38539147	38539148	chr19:38539148:C:G	rs2459631	C	G	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr19	38656139	38656140	chr19:38656140:G:C	rs55876653	G	C	G	Sox2_MA0143.3	26	0	+	0	0	.
chr19	38676411	38676412	chr19:38676412:G:A	rs78049720	G	A	G	Sox2_MA0143.3	27	0	+	0	0	.
chr19	38733632	38733633	chr19:38733633:G:A	rs369714213	G	A	G	Sox2_MA0143.3	16	0	-	0	0	.
chr19	38802654	38802655	chr19:38802655:C:A	rs12461466	C	A	C	Sox2_MA0143.3	19	0	-	0	0	.
chr19	38835708	38835709	chr19:38835709:G:A	rs55797435	G	A	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr19	38838639	38838640	chr19:38838640:T:A	rs745951413	T	A	T	Sox2_MA0143.3	18	0	+	0	0	.
chr19	38962591	38962592	chr19:38962592:A:G	rs12151267	A	G	A	Sox2_MA0143.3	20	0	+	0	0	.
chr19	38988994	38988995	chr19:38988995:C:T	rs78158925	C	T	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr19	39001205	39001206	chr19:39001206:A:G	rs73049875	A	G	A	Sox2_MA0143.3	18	0	+	0	0	.
chr19	39036776	39036777	chr19:39036777:C:G	rs10853724	C	G	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr19	39038391	39038392	chr19:39038392:T:C	rs369269509	T	C	T	Sox2_MA0143.3	26	0	+	0	0	.
chr19	39053422	39053423	chr19:39053423:G:C	rs137897977	G	C	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr19	39053427	39053428	chr19:39053428:G:A	rs75316533	G	A	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr19	39056319	39056320	chr19:39056320:C:T	rs10409280	C	T	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr19	39167550	39167551	chr19:39167551:C:T	rs1005207460	C	T	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr19	39202847	39202848	chr19:39202848:T:C	rs191932264	T	C	T	Sox2_MA0143.3	-2	0	-	0	0	.
chr19	39258536	39258537	chr19:39258537:G:A	rs140241622	G	A	G	Sox2_MA0143.3	17	0	+	0	0	.
chr19	39326431	39326432	chr19:39326432:G:A	rs75368110	G	A	G	Sox2_MA0143.3	-3	0	+	0	0	.
chr19	39326459	39326460	chr19:39326460:A:G	rs194016	A	G	G	Sox2_MA0143.3	25	0	+	0	0	.
chr19	39335629	39335630	chr19:39335630:G:A	rs114932974	G	A	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr19	39335669	39335670	chr19:39335670:A:T	rs41275744	A	T	A	Sox2_MA0143.3	24	0	+	0	0	.
chr19	39401808	39401809	chr19:39401809:A:G	rs116920205	A	G	A	Sox2_MA0143.3	27	0	-	0	0	.
chr19	39533621	39533622	chr19:39533622:A:G	rs11879944	A	G	A	Sox2_MA0143.3	22	0	+	0	0	.
chr19	39563585	39563586	chr19:39563586:C:T	rs117794399	C	T	-	Sox2_MA0143.3	24	0	+	0	0	.
chr19	39587790	39587791	chr19:39587791:T:C	rs17641650	T	C	-	Sox2_MA0143.3	-5	0	+	0	0	.
chr19	39587820	39587821	chr19:39587821:G:A	rs10404254	G	A	-	Sox2_MA0143.3	25	0	+	0	0	.
chr19	39704225	39704226	chr19:39704226:C:T	rs2286757	C	T	-	Sox2_MA0143.3	-20	0	-	0	0	.
chr19	39735216	39735217	chr19:39735217:G:T	rs372081	G	T	-	Sox2_MA0143.3	18	0	-	0	0	.
chr19	39848452	39848453	chr19:39848453:A:G	rs3760928	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr19	39941819	39941820	chr19:39941820:A:G	rs1357445933	A	G	.	Sox2_MA0143.3	4	1	-	8.676919043985553	1.7681642646703322	CCATTGTG
chr19	39968989	39968990	chr19:39968990:A:G	rs234364	A	G	.	Sox2_MA0143.3	-1	0	+	0	0	.
chr19	39984090	39984091	chr19:39984091:C:T	rs10417013	C	T	C	Sox2_MA0143.3	11	0	+	0	0	.
chr19	40121043	40121044	chr19:40121044:C:T	rs1327186	C	T	T	Sox2_MA0143.3	22	0	-	0	0	.
chr19	40121044	40121045	chr19:40121045:T:G	rs1327187	T	G	G	Sox2_MA0143.3	21	0	-	0	0	.
chr19	40121064	40121065	chr19:40121065:G:A	rs1327188	G	A	G	Sox2_MA0143.3	1	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr19	40264713	40264714	chr19:40264714:C:T	rs73933232	C	T	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr19	40266673	40266674	chr19:40266674:A:G	rs4558508	A	G	G	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr19	40296588	40296589	chr19:40296589:C:T	rs74365370	C	T	C	Sox2_MA0143.3	22	0	+	0	0	.
chr19	40378252	40378253	chr19:40378253:G:A	rs4635	G	A	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr19	40384932	40384933	chr19:40384933:C:T	rs73046355	C	T	c	Sox2_MA0143.3	-19	0	+	0	0	.
chr19	40392497	40392498	chr19:40392498:G:A	rs79834333	G	A	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr19	40463405	40463406	chr19:40463406:C:T	rs111862117	C	T	C	Sox2_MA0143.3	5	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr19	40584283	40584284	chr19:40584284:C:T	rs410101	C	T	T	Sox2_MA0143.3	0	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr19	40600778	40600779	chr19:40600779:C:T	rs561862315	C	T	C	Sox2_MA0143.3	14	0	+	0	0	.
chr19	40605938	40605939	chr19:40605939:C:T	rs118158487	C	T	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr19	40606049	40606050	chr19:40606050:T:C	rs192817364	T	C	T	Sox2_MA0143.3	11	0	+	0	0	.
chr19	40642891	40642892	chr19:40642892:G:C	rs10408947	G	C	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr19	40647106	40647107	chr19:40647107:A:T	rs117034257	A	T	-	Sox2_MA0143.3	-20	0	-	0	0	.
chr19	40751326	40751327	chr19:40751327:A:T	chr19:40751327:A:T	A	T	A	Sox2_MA0143.3	14	0	-	0	0	.
chr19	40764149	40764150	chr19:40764150:T:G	rs17713068	T	G	T	Sox2_MA0143.3	3	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr19	40777348	40777349	chr19:40777349:G:C	rs368147663	G	C	G	Sox2_MA0143.3	8	0	+	0	0	.
chr19	40814069	40814070	chr19:40814070:C:T	rs113614917	C	T	C	Sox2_MA0143.3	0	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr19	40814074	40814075	chr19:40814075:G:A	rs140817220	G	A	G	Sox2_MA0143.3	5	1	+	9.206767037375712	2.298012258060492	CCTTTGTC
chr19	40821880	40821881	chr19:40821881:T:C	rs56185718	T	C	T	Sox2_MA0143.3	25	0	+	0	0	.
chr19	40827345	40827346	chr19:40827346:C:T	rs2644890	C	T	c	Sox2_MA0143.3	-17	0	-	0	0	.
chr19	40829893	40829894	chr19:40829894:C:T	rs74719953	C	T	c	Sox2_MA0143.3	0	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr19	40875404	40875405	chr19:40875405:A:G	rs73048976	A	G	a	Sox2_MA0143.3	15	0	-	0	0	.
chr19	40875428	40875429	chr19:40875429:G:A	rs56097499	G	A	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr19	41025691	41025692	chr19:41025692:C:G	rs35930845	C	G	C	Sox2_MA0143.3	13	0	-	0	0	.
chr19	41028009	41028010	chr19:41028010:G:A	rs34855348	G	A	g	Sox2_MA0143.3	1	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr19	41144664	41144665	chr19:41144665:G:A	rs115386805	G	A	.	Sox2_MA0143.3	-19	0	+	0	0	.
chr19	41144675	41144676	chr19:41144676:T:C	rs190308941	T	C	.	Sox2_MA0143.3	-8	0	+	0	0	.
chr19	41160466	41160467	chr19:41160467:G:A	rs1709123	G	A	.	Sox2_MA0143.3	-15	0	-	0	0	.
chr19	41167391	41167392	chr19:41167392:T:C	rs73043210	T	C	.	Sox2_MA0143.3	18	0	-	0	0	.
chr19	41262331	41262332	chr19:41262332:G:A	rs765751631	G	A	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr19	41263119	41263120	chr19:41263120:A:T	rs3760660	A	T	T	Sox2_MA0143.3	-13	0	+	0	0	.
chr19	41314307	41314308	chr19:41314308:G:A	rs12980839	G	A	A	Sox2_MA0143.3	-3	0	-	0	0	.
chr19	41414859	41414860	chr19:41414860:T:C	rs10409485	T	C	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr19	41416446	41416447	chr19:41416447:A:G	rs4803468	A	G	g	Sox2_MA0143.3	3	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr19	41545992	41545993	chr19:41545993:C:T	rs75257030	C	T	-	Sox2_MA0143.3	-12	0	+	0	0	.
chr19	41600324	41600325	chr19:41600325:A:G	rs112932048	A	G	-	Sox2_MA0143.3	-20	0	-	0	0	.
chr19	41603135	41603136	chr19:41603136:C:A	rs78331856	C	A	-	Sox2_MA0143.3	-8	0	-	0	0	.
chr19	41695577	41695578	chr19:41695578:T:C	rs12461373	T	C	t	Sox2_MA0143.3	2	1	-	9.019595766176417	2.900948058900136	CCATTGTC
chr19	41885212	41885213	chr19:41885213:A:T	rs882520	A	T	A	Sox2_MA0143.3	19	0	+	0	0	.
chr19	41910269	41910270	chr19:41910270:A:G	rs10403081	A	G	A	Sox2_MA0143.3	23	0	+	0	0	.
chr19	41918183	41918184	chr19:41918184:C:T	rs73550639	C	T	C	Sox2_MA0143.3	19	0	+	0	0	.
chr19	42133380	42133381	chr19:42133381:A:G	rs147084967	A	G	A	Sox2_MA0143.3	-4	0	-	0	0	.
chr19	42172328	42172329	chr19:42172329:T:C	rs1195296	T	C	C	Sox2_MA0143.3	14	0	+	0	0	.
chr19	42185559	42185560	chr19:42185560:G:A	rs114204850	G	A	g	Sox2_MA0143.3	-16	0	+	0	0	.
chr19	42285501	42285502	chr19:42285502:A:G	rs184531955	A	G	A	Sox2_MA0143.3	-7	0	+	0	0	.
chr19	42450515	42450516	chr19:42450516:C:T	rs576218277	C	T	c	Sox2_MA0143.3	-17	0	+	0	0	.
chr19	42550307	42550308	chr19:42550308:A:G	rs10411458	A	G	G	Sox2_MA0143.3	23	0	-	0	0	.
chr19	42683901	42683902	chr19:42683902:C:T	rs11881890	C	T	T	Sox2_MA0143.3	-15	0	+	0	0	.
chr19	42683927	42683928	chr19:42683928:C:A	rs11881891	C	A	A	Sox2_MA0143.3	11	0	+	0	0	.
chr19	42736121	42736122	chr19:42736122:G:T	rs151239845	G	T	g	Sox2_MA0143.3	16	0	+	0	0	.
chr19	42785351	42785352	chr19:42785352:C:G	rs28677940	C	G	-	Sox2_MA0143.3	21	0	-	0	0	.
chr19	42824167	42824168	chr19:42824168:G:A	chr19:42824168:G:A	G	A	g	Sox2_MA0143.3	17	0	+	0	0	.
chr19	42830751	42830752	chr19:42830752:C:G	rs115800410	C	G	-	Sox2_MA0143.3	-16	0	-	0	0	.
chr19	42865129	42865130	chr19:42865130:G:A	rs144362385	G	A	N	Sox2_MA0143.3	14	0	-	0	0	.
chr19	42875286	42875287	chr19:42875287:A:G	rs1197713500	A	G	a	Sox2_MA0143.3	-8	0	+	0	0	.
chr19	42927188	42927189	chr19:42927189:C:T	rs60808133	C	T	.	Sox2_MA0143.3	15	0	+	0	0	.
chr19	42934459	42934460	chr19:42934460:T:C	rs115658055	T	C	.	Sox2_MA0143.3	20	0	+	0	0	.
chr19	42992461	42992462	chr19:42992462:C:T	rs9789336	C	T	.	Sox2_MA0143.3	27	0	+	0	0	.
chr19	43060130	43060131	chr19:43060131:A:G	rs4029175	A	G	.	Sox2_MA0143.3	19	0	-	0	0	.
chr19	43078291	43078292	chr19:43078292:A:G	rs148150713	A	G	.	Sox2_MA0143.3	13	0	+	0	0	.
chr19	43182193	43182194	chr19:43182194:A:T	rs2190838	A	T	.	Sox2_MA0143.3	-4	0	+	0	0	.
chr19	43183210	43183211	chr19:43183211:A:G	rs73050284	A	G	.	Sox2_MA0143.3	-8	0	-	0	0	.
chr19	43201907	43201908	chr19:43201908:T:G	rs28742135	T	G	.	Sox2_MA0143.3	4	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr19	43201908	43201909	chr19:43201909:G:T	rs28681583	G	T	.	Sox2_MA0143.3	5	1	+	9.019595766176417	2.110840986861197	CCATTGTC
chr19	43202933	43202934	chr19:43202934:G:A	rs10410296	G	A	.	Sox2_MA0143.3	-7	0	+	0	0	.
chr19	43204092	43204093	chr19:43204093:G:C	rs3170216	G	C	.	Sox2_MA0143.3	-14	0	+	0	0	.
chr19	43265828	43265829	chr19:43265829:A:C	rs34637286	A	C	.	Sox2_MA0143.3	-10	0	-	0	0	.
chr19	43301316	43301317	chr19:43301317:G:A	rs62113680	G	A	.	Sox2_MA0143.3	-19	0	-	0	0	.
chr19	43341909	43341910	chr19:43341910:G:A	rs12609644	G	A	.	Sox2_MA0143.3	1	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr19	43417908	43417909	chr19:43417909:A:G	rs3816438	A	G	A	Sox2_MA0143.3	9	0	+	0	0	.
chr19	43430229	43430230	chr19:43430230:T:C	rs2682574	T	C	t	Sox2_MA0143.3	9	0	-	0	0	.
chr19	43430239	43430240	chr19:43430240:C:T	rs567133422	C	T	c	Sox2_MA0143.3	-1	0	-	0	0	.
chr19	43546078	43546079	chr19:43546079:G:T	rs2307184	G	T	G	Sox2_MA0143.3	-12	0	+	0	0	.
chr19	43623959	43623960	chr19:43623960:A:T	chr19:43623960:A:T	A	T	A	Sox2_MA0143.3	-11	0	+	0	0	.
chr19	43636862	43636863	chr19:43636863:T:C	rs400058	T	C	T	Sox2_MA0143.3	-15	0	-	0	0	.
chr19	43679545	43679546	chr19:43679546:G:C	rs382465	G	C	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr19	43694731	43694732	chr19:43694732:G:A	rs346061	G	A	A	Sox2_MA0143.3	-1	0	+	0	0	.
chr19	43796423	43796424	chr19:43796424:C:T	rs11083725	C	T	T	Sox2_MA0143.3	-17	0	+	0	0	.
chr19	43804426	43804427	chr19:43804427:A:G	rs75658751	A	G	A	Sox2_MA0143.3	-15	0	+	0	0	.
chr19	43807065	43807066	chr19:43807066:C:T	rs10423679	C	T	C	Sox2_MA0143.3	17	0	+	0	0	.
chr19	43934213	43934214	chr19:43934214:T:C	rs444816	T	C	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr19	43935661	43935662	chr19:43935662:T:C	chr19:43935662:T:C	T	C	T	Sox2_MA0143.3	-15	0	+	0	0	.
chr19	43935751	43935752	chr19:43935752:G:A	rs183685938	G	A	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr19	44173079	44173080	chr19:44173080:A:G	rs12459795	A	G	A	Sox2_MA0143.3	7	1	+	3.5547341015215945	8.864090315184848	CCTTTGTA
chr19	44274251	44274252	chr19:44274252:A:C	rs1233428	A	C	C	Sox2_MA0143.3	3	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr19	44346400	44346401	chr19:44346401:G:A	rs2356881	G	A	G	Sox2_MA0143.3	5	1	+	9.613475778572903	2.7047209992576837	CCATTGTT
chr19	44499214	44499215	chr19:44499215:A:C	rs892596	A	C	A	Sox2_MA0143.3	-14	0	+	0	0	.
chr19	44500492	44500493	chr19:44500493:G:A	rs113511478	G	A	G	Sox2_MA0143.3	19	0	-	0	0	.
chr19	44607001	44607002	chr19:44607002:G:A	rs846886	G	A	G	Sox2_MA0143.3	5	1	+	8.676919043985553	1.7681642646703324	CCATTGTG
chr19	44685244	44685245	chr19:44685245:T:C	rs537892644	T	C	t	Sox2_MA0143.3	27	0	-	0	0	.
chr19	44691967	44691968	chr19:44691968:A:C	rs75077269	A	C	A	Sox2_MA0143.3	6	1	-	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr19	44800320	44800321	chr19:44800321:G:C	rs748913	G	C	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr19	44806582	44806583	chr19:44806583:C:T	rs78510728	C	T	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr19	44869096	44869097	chr19:44869097:T:G	rs8104483	T	G	T	Sox2_MA0143.3	15	0	-	0	0	.
chr19	44892456	44892457	chr19:44892457:T:C	rs157581	T	C	.	Sox2_MA0143.3	-16	0	-	0	0	.
chr19	44927159	44927160	chr19:44927160:T:C	rs11878790	T	C	T	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr19	45092997	45092998	chr19:45092998:C:T	rs982664225	C	T	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr19	45093022	45093023	chr19:45093023:A:C	rs4608431	A	C	A	Sox2_MA0143.3	17	0	+	0	0	.
chr19	45095088	45095089	chr19:45095089:C:G	rs35862522	C	G	C	Sox2_MA0143.3	12	0	-	0	0	.
chr19	45113685	45113686	chr19:45113686:C:T	rs7257566	C	T	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr19	45113723	45113724	chr19:45113724:G:A	rs35836101	G	A	G	Sox2_MA0143.3	19	0	+	0	0	.
chr19	45140698	45140699	chr19:45140699:C:T	rs116863911	C	T	C	Sox2_MA0143.3	13	0	-	0	0	.
chr19	45173105	45173106	chr19:45173106:T:A	rs28555639	T	A	T	Sox2_MA0143.3	2	1	-	9.019595766176417	9.206767037375712	CCATTGTC
chr19	45180189	45180190	chr19:45180190:T:A	rs6509200	T	A	A	Sox2_MA0143.3	6	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr19	45187516	45187517	chr19:45187517:A:G	rs12462536	A	G	G	Sox2_MA0143.3	11	0	+	0	0	.
chr19	45322689	45322690	chr19:45322690:G:A	rs17875641	G	A	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr19	45407413	45407414	chr19:45407414:A:G	rs1046282	A	G	A	Sox2_MA0143.3	-3	0	+	0	0	.
chr19	45456366	45456367	chr19:45456367:A:T	rs142299722	A	T	A	Sox2_MA0143.3	6	1	-	9.019595766176417	2.110840986861197	CCATTGTC
chr19	45456369	45456370	chr19:45456370:A:G	rs145942063	A	G	A	Sox2_MA0143.3	3	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr19	45465539	45465540	chr19:45465540:T:C	rs3760845	T	C	C	Sox2_MA0143.3	3	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr19	45468387	45468388	chr19:45468388:C:A	rs1450827658	C	A	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr19	45577117	45577118	chr19:45577118:G:A	rs1079270	G	A	G	Sox2_MA0143.3	22	0	-	0	0	.
chr19	45646302	45646303	chr19:45646303:C:T	chr19:45646303:C:T	C	T	G	Sox2_MA0143.3	15	0	-	0	0	.
chr19	45767628	45767629	chr19:45767629:G:T	chr19:45767629:G:T	G	T	G	Sox2_MA0143.3	-16	0	-	0	0	.
chr19	45886344	45886345	chr19:45886345:T:G	rs56821477	T	G	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr19	46008750	46008751	chr19:46008751:G:A	rs75305031	G	A	G	Sox2_MA0143.3	23	0	+	0	0	.
chr19	46078304	46078305	chr19:46078305:G:C	rs150472498	G	C	G	Sox2_MA0143.3	-3	0	-	0	0	.
chr19	46327820	46327821	chr19:46327821:G:C	rs73940674	G	C	A	Sox2_MA0143.3	18	0	-	0	0	.
chr19	46375191	46375192	chr19:46375192:T:G	rs10415461	T	G	T	Sox2_MA0143.3	14	0	+	0	0	.
chr19	46472332	46472333	chr19:46472333:T:G	rs8108681	T	G	T	Sox2_MA0143.3	-18	0	-	0	0	.
chr19	46494459	46494460	chr19:46494460:C:T	chr19:46494460:C:T	C	T	C	Sox2_MA0143.3	5	1	-	8.676919043985553	1.7681642646703324	CCATTGTG
chr19	46558273	46558274	chr19:46558274:C:T	rs8106965	C	T	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr19	46616095	46616096	chr19:46616096:A:C	rs10424535	A	C	c	Sox2_MA0143.3	-4	0	+	0	0	.
chr19	46764947	46764948	chr19:46764948:G:A	rs73060716	G	A	G	Sox2_MA0143.3	16	0	+	0	0	.
chr19	46796242	46796243	chr19:46796243:A:G	rs114996002	A	G	A	Sox2_MA0143.3	4	1	-	9.206767037375712	2.2980122580604916	CCTTTGTC
chr19	46861295	46861296	chr19:46861296:C:A	rs555737531	C	A	C	Sox2_MA0143.3	19	0	-	0	0	.
chr19	46879120	46879121	chr19:46879121:G:T	rs111808422	G	T	G	Sox2_MA0143.3	20	0	+	0	0	.
chr19	46951561	46951562	chr19:46951562:T:C	rs77138297	T	C	T	Sox2_MA0143.3	7	1	+	9.613475778572903	9.019595766176417	CCATTGTT
chr19	46991575	46991576	chr19:46991576:A:G	rs139368410	A	G	A	Sox2_MA0143.3	2	1	+	8.676919043985553	2.5582713367092715	CCATTGTG
chr19	47054712	47054713	chr19:47054713:A:G	rs112551143	A	G	g	Sox2_MA0143.3	21	0	+	0	0	.
chr19	47109498	47109499	chr19:47109499:G:A	rs186320157	G	A	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr19	47157876	47157877	chr19:47157877:G:C	rs1077336	G	C	G	Sox2_MA0143.3	10	0	+	0	0	.
chr19	47157877	47157878	chr19:47157878:C:G	rs188694580	C	G	C	Sox2_MA0143.3	11	0	+	0	0	.
chr19	47176087	47176088	chr19:47176088:T:C	rs953000505	T	C	T	Sox2_MA0143.3	-11	0	-	0	0	.
chr19	47230670	47230671	chr19:47230671:C:T	rs1017678801	C	T	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr19	47258285	47258286	chr19:47258286:T:C	rs2302985	T	C	T	Sox2_MA0143.3	-14	0	+	0	0	.
chr19	47275788	47275789	chr19:47275789:G:A	rs73061379	G	A	G	Sox2_MA0143.3	14	0	+	0	0	.
chr19	47275791	47275792	chr19:47275792:C:G	rs187090614	C	G	C	Sox2_MA0143.3	17	0	+	0	0	.
chr19	47305624	47305625	chr19:47305625:C:T	rs183839537	C	T	C	Sox2_MA0143.3	0	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr19	47361174	47361175	chr19:47361175:C:T	rs76610720	C	T	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr19	47466490	47466491	chr19:47466491:C:T	rs830131	C	T	T	Sox2_MA0143.3	-11	0	-	0	0	.
chr19	47523650	47523651	chr19:47523651:G:A	rs140333327	G	A	g	Sox2_MA0143.3	14	0	-	0	0	.
chr19	47573463	47573464	chr19:47573464:C:A	rs2974249	C	A	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr19	47610103	47610104	chr19:47610104:C:A	rs953066688	C	A	C	Sox2_MA0143.3	-5	0	-	0	0	.
chr19	47610115	47610116	chr19:47610116:G:T	rs531158626	G	T	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr19	47616008	47616009	chr19:47616009:T:C	rs112588716	T	C	T	Sox2_MA0143.3	3	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr19	47667236	47667237	chr19:47667237:G:C	rs11083888	G	C	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr19	47744924	47744925	chr19:47744925:A:G	rs2334291	A	G	A	Sox2_MA0143.3	14	0	+	0	0	.
chr19	47776643	47776644	chr19:47776644:C:T	rs11670990	C	T	T	Sox2_MA0143.3	13	0	+	0	0	.
chr19	47950290	47950291	chr19:47950291:G:A	rs1252749927	G	A	-	Sox2_MA0143.3	-11	0	+	0	0	.
chr19	48000686	48000687	chr19:48000687:T:C	rs77751759	T	C	t	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr19	48002210	48002211	chr19:48002211:A:G	rs7257199	A	G	a	Sox2_MA0143.3	-2	0	-	0	0	.
chr19	48086563	48086564	chr19:48086564:A:G	rs382588	A	G	A	Sox2_MA0143.3	-7	0	-	0	0	.
chr19	48095565	48095566	chr19:48095566:A:G	rs156631	A	G	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr19	48096137	48096138	chr19:48096138:A:G	rs1864105	A	G	G	Sox2_MA0143.3	21	0	-	0	0	.
chr19	48124004	48124005	chr19:48124005:G:A	rs156633	G	A	A	Sox2_MA0143.3	16	0	-	0	0	.
chr19	48259423	48259424	chr19:48259424:C:T	rs10408571	C	T	T	Sox2_MA0143.3	8	0	-	0	0	.
chr19	48417580	48417581	chr19:48417581:C:T	rs535760444	C	T	C	Sox2_MA0143.3	27	0	+	0	0	.
chr19	48445720	48445721	chr19:48445721:C:A	rs1643488	C	A	A	Sox2_MA0143.3	5	1	-	9.019595766176417	2.110840986861197	CCATTGTC
chr19	48445721	48445722	chr19:48445722:A:G	rs1799279	A	G	A	Sox2_MA0143.3	4	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr19	48537827	48537828	chr19:48537828:A:G	rs77853708	A	G	A	Sox2_MA0143.3	-14	0	+	0	0	.
chr19	48661181	48661182	chr19:48661182:G:A	rs143096418	G	A	G	Sox2_MA0143.3	17	0	+	0	0	.
chr19	48668335	48668336	chr19:48668336:T:C	rs10414737	T	C	T	Sox2_MA0143.3	20	0	+	0	0	.
chr19	48725226	48725227	chr19:48725227:C:G	chr19:48725227:C:G	C	G	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr19	48746981	48746982	chr19:48746982:C:T	rs838144	C	T	T	Sox2_MA0143.3	-12	0	-	0	0	.
chr19	48796569	48796570	chr19:48796570:C:T	rs35829476	C	T	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr19	48867326	48867327	chr19:48867327:T:A	rs114624057	T	A	T	Sox2_MA0143.3	21	0	-	0	0	.
chr19	48867351	48867352	chr19:48867352:G:T	rs4801778	G	T	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr19	48872398	48872399	chr19:48872399:C:T	rs901239937	C	T	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr19	48872399	48872400	chr19:48872400:C:G	rs773490550	C	G	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr19	48872418	48872419	chr19:48872419:T:C	rs638050	T	C	C	Sox2_MA0143.3	12	0	+	0	0	.
chr19	49037008	49037009	chr19:49037009:G:A	rs12460801	G	A	a	Sox2_MA0143.3	-17	0	+	0	0	.
chr19	49037047	49037048	chr19:49037048:A:C	rs112449679	A	C	c	Sox2_MA0143.3	22	0	+	0	0	.
chr19	49081794	49081795	chr19:49081795:T:G	rs4802549	T	G	G	Sox2_MA0143.3	12	0	-	0	0	.
chr19	49147213	49147214	chr19:49147214:T:G	rs11670142	T	G	T	Sox2_MA0143.3	21	0	+	0	0	.
chr19	49198722	49198723	chr19:49198723:G:A	rs1175804	G	A	G	Sox2_MA0143.3	10	0	+	0	0	.
chr19	49201171	49201172	chr19:49201172:G:A	rs12981989	G	A	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr19	49231853	49231854	chr19:49231854:A:T	rs56758737	A	T	A	Sox2_MA0143.3	-18	0	+	0	0	.
chr19	49335757	49335758	chr19:49335758:T:C	rs354021	T	C	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr19	49368936	49368937	chr19:49368937:C:T	rs57073172	C	T	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr19	49491862	49491863	chr19:49491863:A:G	rs116432725	A	G	A	Sox2_MA0143.3	2	1	+	9.613475778572903	3.494828071296623	CCATTGTT
chr19	49516171	49516172	chr19:49516172:C:T	chr19:49516172:C:T	C	T	C	Sox2_MA0143.3	7	1	-	8.864090315184848	3.5547341015215945	CCTTTGTG
chr19	49555036	49555037	chr19:49555037:G:A	chr19:49555037:G:A	G	A	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr19	49660172	49660173	chr19:49660173:C:T	rs114450521	C	T	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr19	49718663	49718664	chr19:49718664:T:C	rs117118320	T	C	T	Sox2_MA0143.3	19	0	+	0	0	.
chr19	49765793	49765794	chr19:49765794:C:G	rs58026265	C	G	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr19	49765805	49765806	chr19:49765806:A:C	rs137986638	A	C	A	Sox2_MA0143.3	11	0	+	0	0	.
chr19	49839871	49839872	chr19:49839872:T:C	rs921470	T	C	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr19	49850794	49850795	chr19:49850795:T:C	rs1461561909	T	C	T	Sox2_MA0143.3	3	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr19	49858649	49858650	chr19:49858650:C:T	rs34436456	C	T	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr19	49869609	49869610	chr19:49869610:G:A	rs3745483	G	A	G	Sox2_MA0143.3	10	0	-	0	0	.
chr19	49871777	49871778	chr19:49871778:T:C	rs2290774	T	C	C	Sox2_MA0143.3	26	0	+	0	0	.
chr19	49929274	49929275	chr19:49929275:T:C	rs557627402	T	C	T	Sox2_MA0143.3	-19	0	+	0	0	.
chr19	49929292	49929293	chr19:49929293:C:T	rs941794936	C	T	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr19	49929311	49929312	chr19:49929312:G:T	rs926814312	G	T	G	Sox2_MA0143.3	18	0	+	0	0	.
chr19	49980283	49980284	chr19:49980284:C:T	rs16981612	C	T	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr19	49988862	49988863	chr19:49988863:C:T	rs7254964	C	T	C	Sox2_MA0143.3	24	0	-	0	0	.
chr19	49988866	49988867	chr19:49988867:C:T	rs28604969	C	T	C	Sox2_MA0143.3	20	0	-	0	0	.
chr19	50133873	50133874	chr19:50133874:C:A	rs1471331723	C	A	-	Sox2_MA0143.3	-16	0	-	0	0	.
chr19	50203268	50203269	chr19:50203269:C:A	rs117546260	C	A	C	Sox2_MA0143.3	24	0	-	0	0	.
chr19	50203278	50203279	chr19:50203279:C:T	rs770363014	C	T	C	Sox2_MA0143.3	14	0	-	0	0	.
chr19	50215103	50215104	chr19:50215104:C:G	rs73060995	C	G	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr19	50237068	50237069	chr19:50237069:G:A	rs10416769	G	A	G	Sox2_MA0143.3	15	0	+	0	0	.
chr19	50300993	50300994	chr19:50300994:G:A	rs117143947	G	A	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr19	50355366	50355367	chr19:50355367:C:G	rs114883131	C	G	C	Sox2_MA0143.3	0	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr19	50418772	50418773	chr19:50418773:G:A	rs77779859	G	A	G	Sox2_MA0143.3	23	0	-	0	0	.
chr19	50418776	50418777	chr19:50418777:T:C	rs180713559	T	C	T	Sox2_MA0143.3	19	0	-	0	0	.
chr19	50423484	50423485	chr19:50423485:A:G	rs3745516	A	G	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr19	50604971	50604972	chr19:50604972:T:C	rs12974641	T	C	-	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr19	50638125	50638126	chr19:50638126:G:A	rs139003155	G	A	G	Sox2_MA0143.3	15	0	-	0	0	.
chr19	50785348	50785349	chr19:50785349:T:C	rs56840371	T	C	t	Sox2_MA0143.3	-17	0	+	0	0	.
chr19	50830417	50830418	chr19:50830418:A:G	rs7246740	A	G	A	Sox2_MA0143.3	16	0	-	0	0	.
chr19	50854663	50854664	chr19:50854664:G:A	rs4802754	G	A	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr19	50860191	50860192	chr19:50860192:A:G	rs1058274	A	G	a	Sox2_MA0143.3	-20	0	+	0	0	.
chr19	50992050	50992051	chr19:50992051:T:C	rs2659071	T	C	T	Sox2_MA0143.3	-7	0	+	0	0	.
chr19	51030032	51030033	chr19:51030033:C:T	rs113977308	C	T	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr19	51035304	51035305	chr19:51035305:G:T	rs3760739	G	T	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr19	51074714	51074715	chr19:51074715:G:A	rs189227889	G	A	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr19	51092878	51092879	chr19:51092879:G:A	rs2691273	G	A	A	Sox2_MA0143.3	18	0	+	0	0	.
chr19	51093683	51093684	chr19:51093684:A:G	rs16988904	A	G	A	Sox2_MA0143.3	-3	0	+	0	0	.
chr19	51111897	51111898	chr19:51111898:G:A	rs17801525	G	A	a	Sox2_MA0143.3	23	0	+	0	0	.
chr19	51167085	51167086	chr19:51167086:T:G	rs1328252023	T	G	T	Sox2_MA0143.3	-17	0	-	0	0	.
chr19	51174133	51174134	chr19:51174134:G:A	rs76206169	G	A	A	Sox2_MA0143.3	-9	0	-	0	0	.
chr19	51258963	51258964	chr19:51258964:C:T	rs55744949	C	T	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr19	51275697	51275698	chr19:51275698:G:C	rs12975233	G	C	.	Sox2_MA0143.3	23	0	-	0	0	.
chr19	51363786	51363787	chr19:51363787:T:A	rs12609464	T	A	T	Sox2_MA0143.3	15	0	-	0	0	.
chr19	51363790	51363791	chr19:51363791:G:A	rs1968242	G	A	G	Sox2_MA0143.3	11	0	-	0	0	.
chr19	51363915	51363916	chr19:51363916:A:T	rs4802791	A	T	A	Sox2_MA0143.3	-4	0	-	0	0	.
chr19	51393003	51393004	chr19:51393004:C:T	rs7250926	C	T	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr19	51395113	51395114	chr19:51395114:A:G	rs73562126	A	G	A	Sox2_MA0143.3	-14	0	+	0	0	.
chr19	51530317	51530318	chr19:51530318:T:C	rs2305771	T	C	N	Sox2_MA0143.3	-18	0	-	0	0	.
chr19	51592187	51592188	chr19:51592188:G:A	rs7259649	G	A	A	Sox2_MA0143.3	9	0	-	0	0	.
chr19	51655458	51655459	chr19:51655459:A:G	rs8105064	A	G	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr19	51665810	51665811	chr19:51665811:A:G	rs28613314	A	G	A	Sox2_MA0143.3	15	0	+	0	0	.
chr19	51680630	51680631	chr19:51680631:T:C	rs10407039	T	C	C	Sox2_MA0143.3	4	1	+	9.206767037375712	2.2980122580604916	CCTTTGTC
chr19	51752735	51752736	chr19:51752736:A:C	rs12610918	A	C	.	Sox2_MA0143.3	-8	0	-	0	0	.
chr19	51804780	51804781	chr19:51804781:T:C	rs7259815	T	C	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr19	51806381	51806382	chr19:51806382:A:G	rs7248607	A	G	A	Sox2_MA0143.3	26	0	+	0	0	.
chr19	51811685	51811686	chr19:51811686:G:A	rs62108952	G	A	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr19	52026734	52026735	chr19:52026735:G:A	rs62107522	G	A	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr19	52026753	52026754	chr19:52026754:G:A	rs111662714	G	A	G	Sox2_MA0143.3	9	0	+	0	0	.
chr19	52049165	52049166	chr19:52049166:C:T	rs79443764	C	T	C	Sox2_MA0143.3	5	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr19	52170387	52170388	chr19:52170388:T:C	rs113853143	T	C	T	Sox2_MA0143.3	17	0	+	0	0	.
chr19	52217803	52217804	chr19:52217804:A:G	rs10419304	A	G	A	Sox2_MA0143.3	3	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr19	52297215	52297216	chr19:52297216:C:G	rs560421543	C	G	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr19	52297545	52297546	chr19:52297546:A:G	rs3810122	A	G	A	Sox2_MA0143.3	-20	0	+	0	0	.
chr19	52336314	52336315	chr19:52336315:A:G	rs1540745	A	G	A	Sox2_MA0143.3	16	0	+	0	0	.
chr19	52369985	52369986	chr19:52369986:C:T	rs73581129	C	T	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr19	52397914	52397915	chr19:52397915:C:T	rs73586045	C	T	C	Sox2_MA0143.3	1	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr19	52397924	52397925	chr19:52397925:G:A	rs149601041	G	A	A	Sox2_MA0143.3	11	0	+	0	0	.
chr19	52410598	52410599	chr19:52410599:C:T	rs111231903	C	T	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr19	52453615	52453616	chr19:52453616:C:T	rs541678443	C	T	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr19	52453631	52453632	chr19:52453632:G:C	chr19:52453632:G:C	G	C	G	Sox2_MA0143.3	15	0	+	0	0	.
chr19	52505737	52505738	chr19:52505738:G:A	rs400278	G	A	A	Sox2_MA0143.3	15	0	+	0	0	.
chr19	52749372	52749373	chr19:52749373:T:C	rs1072750	T	C	N	Sox2_MA0143.3	27	0	+	0	0	.
chr19	52753797	52753798	chr19:52753798:G:A	rs10426967	G	A	N	Sox2_MA0143.3	-19	0	+	0	0	.
chr19	52760859	52760860	chr19:52760860:A:T	rs11882045	A	T	a	Sox2_MA0143.3	14	0	-	0	0	.
chr19	52779511	52779512	chr19:52779512:G:C	rs10417598	G	C	N	Sox2_MA0143.3	15	0	-	0	0	.
chr19	52829685	52829686	chr19:52829686:G:C	rs10403721	G	C	N	Sox2_MA0143.3	10	0	+	0	0	.
chr19	52855635	52855636	chr19:52855636:A:G	rs6509698	A	G	N	Sox2_MA0143.3	-6	0	-	0	0	.
chr19	52896853	52896854	chr19:52896854:G:C	rs11669971	G	C	N	Sox2_MA0143.3	-14	0	-	0	0	.
chr19	52962381	52962382	chr19:52962382:G:C	rs77803298	G	C	g	Sox2_MA0143.3	-8	0	-	0	0	.
chr19	53113686	53113687	chr19:53113687:A:G	rs77281116	A	G	A	Sox2_MA0143.3	4	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr19	53255025	53255026	chr19:53255026:G:C	rs183311070	G	C	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr19	53286637	53286638	chr19:53286638:A:G	rs7249558	A	G	N	Sox2_MA0143.3	27	0	-	0	0	.
chr19	53374393	53374394	chr19:53374394:T:C	rs8101761	T	C	t	Sox2_MA0143.3	-7	0	+	0	0	.
chr19	53436711	53436712	chr19:53436712:C:T	rs12609110	C	T	c	Sox2_MA0143.3	11	0	+	0	0	.
chr19	53463007	53463008	chr19:53463008:G:C	rs2617718	G	C	N	Sox2_MA0143.3	18	0	-	0	0	.
chr19	53472279	53472280	chr19:53472280:G:A	rs73938803	G	A	g	Sox2_MA0143.3	25	0	+	0	0	.
chr19	53622024	53622025	chr19:53622025:A:G	rs59716235	A	G	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr19	53652693	53652694	chr19:53652694:A:G	rs79790285	A	G	A	Sox2_MA0143.3	-20	0	+	0	0	.
chr19	53701979	53701980	chr19:53701980:A:G	rs1865046	A	G	A	Sox2_MA0143.3	19	0	+	0	0	.
chr19	53724031	53724032	chr19:53724032:G:A	rs4803168	G	A	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr19	53781434	53781435	chr19:53781435:G:T	rs4599029	G	T	G	Sox2_MA0143.3	-14	0	+	0	0	.
chr19	53842506	53842507	chr19:53842507:A:T	rs142919166	A	T	A	Sox2_MA0143.3	21	0	+	0	0	.
chr19	53881285	53881286	chr19:53881286:G:A	rs2545047	G	A	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr19	53881290	53881291	chr19:53881291:G:A	rs2545048	G	A	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr19	54043933	54043934	chr19:54043934:C:T	rs76057368	C	T	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr19	54100127	54100128	chr19:54100128:T:C	rs10410390	T	C	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr19	54141433	54141434	chr19:54141434:G:A	rs36635	G	A	A	Sox2_MA0143.3	5	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr19	54173408	54173409	chr19:54173409:C:G	rs653560	C	G	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr19	54179149	54179150	chr19:54179150:C:T	rs2278499	C	T	T	Sox2_MA0143.3	12	0	-	0	0	.
chr19	54247293	54247294	chr19:54247294:G:A	rs79016353	G	A	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr19	54252793	54252794	chr19:54252794:T:C	rs434755	T	C	G	Sox2_MA0143.3	3	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr19	54274965	54274966	chr19:54274966:C:T	rs187615519	C	T	t	Sox2_MA0143.3	20	0	+	0	0	.
chr19	54303326	54303327	chr19:54303327:A:C	rs1761456	A	C	c	Sox2_MA0143.3	-9	0	+	0	0	.
chr19	54309395	54309396	chr19:54309396:C:T	rs1761464	C	T	c	Sox2_MA0143.3	-16	0	-	0	0	.
chr19	54312262	54312263	chr19:54312263:C:T	rs1761463	C	T	c	Sox2_MA0143.3	-20	0	+	0	0	.
chr19	54325350	54325351	chr19:54325351:C:T	rs1000900974	C	T	C	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr19	54325892	54325893	chr19:54325893:A:G	rs12979085	A	G	G	Sox2_MA0143.3	12	0	+	0	0	.
chr19	54336699	54336700	chr19:54336700:A:C	rs55684444	A	C	A	Sox2_MA0143.3	13	0	-	0	0	.
chr19	54348248	54348249	chr19:54348249:A:G	rs4806748	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr19	54348257	54348258	chr19:54348258:T:C	rs4806749	T	C	T	Sox2_MA0143.3	-6	0	-	0	0	.
chr19	54420382	54420383	chr19:54420383:C:T	chr19:54420383:C:T	C	T	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr19	54420458	54420459	chr19:54420459:G:A	rs113682778	G	A	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr19	54420616	54420617	chr19:54420617:T:C	rs34969264	T	C	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr19	54491872	54491873	chr19:54491873:G:A	rs8111398	G	A	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr19	54532592	54532593	chr19:54532593:A:G	rs17606773	A	G	G	Sox2_MA0143.3	-2	0	+	0	0	.
chr19	54598417	54598418	chr19:54598418:C:A	rs7255954	C	A	a	Sox2_MA0143.3	11	0	-	0	0	.
chr19	54726775	54726776	chr19:54726776:G:T	rs62131757	G	T	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr19	54739971	54739972	chr19:54739972:T:C	rs643236	T	C	.	Sox2_MA0143.3	9	0	-	0	0	.
chr19	54771160	54771161	chr19:54771161:C:A	rs112698509	C	A	.	Sox2_MA0143.3	-10	0	-	0	0	.
chr19	54771170	54771171	chr19:54771171:C:T	rs111380462	C	T	.	Sox2_MA0143.3	-20	0	-	0	0	.
chr19	54893554	54893555	chr19:54893555:C:G	rs77345998	C	G	C	Sox2_MA0143.3	5	1	-	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr19	54905518	54905519	chr19:54905519:A:G	rs116074542	A	G	A	Sox2_MA0143.3	-11	0	-	0	0	.
chr19	55141782	55141783	chr19:55141783:G:A	rs7359930	G	A	G	Sox2_MA0143.3	23	0	-	0	0	.
chr19	55149711	55149712	chr19:55149712:T:C	rs62126322	T	C	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr19	55257737	55257738	chr19:55257738:T:C	rs375567724	T	C	t	Sox2_MA0143.3	-10	0	+	0	0	.
chr19	55260015	55260016	chr19:55260016:G:A	rs147539159	G	A	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr19	55343020	55343021	chr19:55343021:G:A	rs12610863	G	A	G	Sox2_MA0143.3	14	0	+	0	0	.
chr19	55389730	55389731	chr19:55389731:T:C	rs10425596	T	C	T	Sox2_MA0143.3	4	1	+	9.206767037375712	2.2980122580604916	CCTTTGTC
chr19	55503389	55503390	chr19:55503390:C:G	rs62130163	C	G	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr19	55544069	55544070	chr19:55544070:A:G	rs694398	A	G	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr19	55581352	55581353	chr19:55581353:C:T	rs1079083	C	T	T	Sox2_MA0143.3	-16	0	+	0	0	.
chr19	55600189	55600190	chr19:55600190:G:C	chr19:55600190:G:C	G	C	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr19	55600206	55600207	chr19:55600207:C:T	rs113205831	C	T	C	Sox2_MA0143.3	11	0	+	0	0	.
chr19	55603721	55603722	chr19:55603722:A:C	rs1344618576	A	C	A	Sox2_MA0143.3	-5	0	-	0	0	.
chr19	55648404	55648405	chr19:55648405:C:T	rs572326690	C	T	c	Sox2_MA0143.3	17	0	-	0	0	.
chr19	55708878	55708879	chr19:55708879:C:G	rs2287832	C	G	C	Sox2_MA0143.3	1	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr19	55892838	55892839	chr19:55892839:G:A	rs193232939	G	A	g	Sox2_MA0143.3	18	0	-	0	0	.
chr19	56107505	56107506	chr19:56107506:T:C	rs538212	T	C	t	Sox2_MA0143.3	12	0	-	0	0	.
chr19	56141748	56141749	chr19:56141749:C:T	rs182897556	C	T	C	Sox2_MA0143.3	9	0	-	0	0	.
chr19	56167357	56167358	chr19:56167358:A:G	rs148507023	A	G	A	Sox2_MA0143.3	25	0	-	0	0	.
chr19	56276316	56276317	chr19:56276317:C:T	rs11672079	C	T	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr19	56276320	56276321	chr19:56276321:C:T	rs11672081	C	T	C	Sox2_MA0143.3	0	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr19	56404350	56404351	chr19:56404351:G:A	rs550139986	G	A	G	Sox2_MA0143.3	7	1	+	8.864090315184848	3.5547341015215945	CCTTTGTG
chr19	56404362	56404363	chr19:56404363:C:G	rs367599155	C	G	C	Sox2_MA0143.3	19	0	+	0	0	.
chr19	56475802	56475803	chr19:56475803:G:T	rs7251105	G	T	g	Sox2_MA0143.3	-3	0	+	0	0	.
chr19	56596860	56596861	chr19:56596861:G:A	rs1548865	G	A	A	Sox2_MA0143.3	26	0	-	0	0	.
chr19	56597547	56597548	chr19:56597548:G:T	rs76415578	G	T	G	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr19	56667698	56667699	chr19:56667699:T:C	rs79416593	T	C	T	Sox2_MA0143.3	-12	0	+	0	0	.
chr19	56671492	56671493	chr19:56671493:G:A	rs62130951	G	A	G	Sox2_MA0143.3	22	0	-	0	0	.
chr19	56671528	56671529	chr19:56671529:G:A	rs62130952	G	A	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr19	56673376	56673377	chr19:56673377:C:G	rs10084136	C	G	t	Sox2_MA0143.3	-15	0	-	0	0	.
chr19	56718735	56718736	chr19:56718736:A:T	rs4801369	A	T	a	Sox2_MA0143.3	-15	0	-	0	0	.
chr19	56920064	56920065	chr19:56920065:A:C	rs75253812	A	C	A	Sox2_MA0143.3	14	0	+	0	0	.
chr19	56987267	56987268	chr19:56987268:G:A	rs540600733	G	A	g	Sox2_MA0143.3	-8	0	+	0	0	.
chr19	57076258	57076259	chr19:57076259:T:C	rs11673420	T	C	T	Sox2_MA0143.3	2	1	+	9.800647049772198	3.494828071296623	CCTTTGTT
chr19	57106180	57106181	chr19:57106181:A:C	rs76041435	A	C	a	Sox2_MA0143.3	16	0	-	0	0	.
chr19	57114979	57114980	chr19:57114980:A:G	rs10423919	A	G	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr19	57166040	57166041	chr19:57166041:T:C	rs4801203	T	C	T	Sox2_MA0143.3	9	0	-	0	0	.
chr19	57224711	57224712	chr19:57224712:C:G	rs4801446	C	G	G	Sox2_MA0143.3	24	0	+	0	0	.
chr19	57235454	57235455	chr19:57235455:G:A	rs35582299	G	A	G	Sox2_MA0143.3	18	0	+	0	0	.
chr19	57270282	57270283	chr19:57270283:C:G	rs55836057	C	G	C	Sox2_MA0143.3	0	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr19	57280155	57280156	chr19:57280156:G:A	rs554040310	G	A	G	Sox2_MA0143.3	24	0	+	0	0	.
chr19	57326649	57326650	chr19:57326650:C:G	rs6510057	C	G	C	Sox2_MA0143.3	12	0	+	0	0	.
chr19	57363654	57363655	chr19:57363655:C:T	rs940237790	C	T	C	Sox2_MA0143.3	16	0	+	0	0	.
chr19	57390053	57390054	chr19:57390054:G:T	rs75599624	G	T	G	Sox2_MA0143.3	8	0	+	0	0	.
chr19	57660371	57660372	chr19:57660372:G:C	rs73064570	G	C	g	Sox2_MA0143.3	-11	0	-	0	0	.
chr19	57671155	57671156	chr19:57671156:C:T	rs11879391	C	T	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr19	57712459	57712460	chr19:57712460:C:G	rs34039676	C	G	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr19	57768896	57768897	chr19:57768897:C:T	rs77850476	C	T	C	Sox2_MA0143.3	0	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr19	57805120	57805121	chr19:57805121:G:A	rs28368973	G	A	.	Sox2_MA0143.3	16	0	-	0	0	.
chr19	57830233	57830234	chr19:57830234:G:A	rs145840189	G	A	.	Sox2_MA0143.3	27	0	-	0	0	.
chr19	57847175	57847176	chr19:57847176:G:C	rs2007552	G	C	.	Sox2_MA0143.3	22	0	-	0	0	.
chr19	58002527	58002528	chr19:58002528:G:A	rs529045494	G	A	G	Sox2_MA0143.3	10	0	-	0	0	.
chr19	58002788	58002789	chr19:58002789:G:A	rs578218695	G	A	G	Sox2_MA0143.3	8	0	-	0	0	.
chr19	58002814	58002815	chr19:58002815:T:C	rs9304808	T	C	T	Sox2_MA0143.3	-18	0	-	0	0	.
chr19	58011165	58011166	chr19:58011166:G:A	rs4801246	G	A	A	Sox2_MA0143.3	24	0	+	0	0	.
chr19	58148307	58148308	chr19:58148308:A:G	rs75046869	A	G	-	Sox2_MA0143.3	13	0	+	0	0	.
chr19	58153633	58153634	chr19:58153634:G:C	rs157375	G	C	G	Sox2_MA0143.3	25	0	+	0	0	.
chr19	58154448	58154449	chr19:58154449:G:A	rs79955355	G	A	G	Sox2_MA0143.3	-9	0	+	0	0	.
chr19	58154449	58154450	chr19:58154450:C:A	rs35511051	C	A	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr19	58183417	58183418	chr19:58183418:G:A	rs552904927	G	A	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr19	58278978	58278979	chr19:58278979:C:T	rs537407412	C	T	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr19	58278991	58278992	chr19:58278992:G:T	rs955559943	G	T	G	Sox2_MA0143.3	10	0	+	0	0	.
chr19	58278992	58278993	chr19:58278993:C:A	rs11666156	C	A	C	Sox2_MA0143.3	11	0	+	0	0	.
chr19	58326895	58326896	chr19:58326896:C:T	rs113019525	C	T	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr19	58326902	58326903	chr19:58326903:C:A	rs533515559	C	A	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr19	58440929	58440930	chr19:58440930:C:T	rs75196460	C	T	C	Sox2_MA0143.3	8	0	+	0	0	.
chr19	58456869	58456870	chr19:58456870:C:T	rs140339914	C	T	.	Sox2_MA0143.3	8	0	-	0	0	.
chr19	58492462	58492463	chr19:58492463:C:T	rs11669127	C	T	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr19	58511619	58511620	chr19:58511620:C:T	rs145284710	C	T	c	Sox2_MA0143.3	-8	0	-	0	0	.
chr19	58560652	58560653	chr19:58560653:G:A	rs73068321	G	A	G	Sox2_MA0143.3	22	0	+	0	0	.
chr19	58568702	58568703	chr19:58568703:G:C	rs78397785	G	C	.	Sox2_MA0143.3	-17	0	-	0	0	.
chr19	58606350	58606351	chr19:58606351:G:A	rs149328585	G	A	.	Sox2_MA0143.3	7	1	-	9.019595766176417	9.613475778572903	CCATTGTC
chr19	58606361	58606362	chr19:58606362:C:T	rs144587467	C	T	.	Sox2_MA0143.3	-4	0	-	0	0	.
chr19	58606367	58606368	chr19:58606368:G:A	rs148456899	G	A	.	Sox2_MA0143.3	-10	0	-	0	0	.
chr2	18505	18506	chr2:18506:T:C	rs13400442	T	C	.	Sox2_MA0143.3	-19	0	+	0	0	.
chr2	153223	153224	chr2:153224:G:A	rs74854229	G	A	g	Sox2_MA0143.3	1	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr2	309421	309422	chr2:309422:C:A	rs35977976	C	A	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr2	309439	309440	chr2:309440:C:T	rs149784642	C	T	C	Sox2_MA0143.3	1	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr2	437018	437019	chr2:437019:A:G	rs62104177	A	G	A	Sox2_MA0143.3	-9	0	+	0	0	.
chr2	461255	461256	chr2:461256:G:T	rs11685454	G	T	G	Sox2_MA0143.3	14	0	+	0	0	.
chr2	470697	470698	chr2:470698:A:C	rs7601276	A	C	A	Sox2_MA0143.3	-10	0	-	0	0	.
chr2	471215	471216	chr2:471216:T:C	rs9677639	T	C	-	Sox2_MA0143.3	-1	0	+	0	0	.
chr2	504766	504767	chr2:504767:T:C	rs17041279	T	C	T	Sox2_MA0143.3	13	0	+	0	0	.
chr2	556823	556824	chr2:556824:T:C	rs56355782	T	C	C	Sox2_MA0143.3	14	0	+	0	0	.
chr2	617896	617897	chr2:617897:G:A	rs4241320	G	A	G	Sox2_MA0143.3	11	0	-	0	0	.
chr2	655221	655222	chr2:655222:G:A	rs13029479	G	A	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr2	674206	674207	chr2:674207:G:A	rs143412215	G	A	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr2	680660	680661	chr2:680661:T:C	rs10185517	T	C	C	Sox2_MA0143.3	8	0	+	0	0	.
chr2	746492	746493	chr2:746493:A:C	rs4854368	A	C	A	Sox2_MA0143.3	6	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr2	774468	774469	chr2:774469:T:C	rs7562792	T	C	C	Sox2_MA0143.3	25	0	-	0	0	.
chr2	855208	855209	chr2:855209:G:A	rs4854402	G	A	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr2	866229	866230	chr2:866230:T:C	rs4993012	T	C	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr2	866244	866245	chr2:866245:C:A	rs6727750	C	A	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr2	866819	866820	chr2:866820:C:A	rs4854284	C	A	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr2	883125	883126	chr2:883126:G:T	rs12714429	G	T	G	Sox2_MA0143.3	26	0	+	0	0	.
chr2	886377	886378	chr2:886378:G:A	rs4854417	G	A	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr2	890584	890585	chr2:890585:T:A	rs149474476	T	A	t	Sox2_MA0143.3	6	1	+	9.613475778572903	2.7047209992576837	CCATTGTT
chr2	1053924	1053925	chr2:1053925:C:T	rs113338806	C	T	C	Sox2_MA0143.3	20	0	+	0	0	.
chr2	1124610	1124611	chr2:1124611:A:G	chr2:1124611:A:G	A	G	A	Sox2_MA0143.3	-16	0	+	0	0	.
chr2	1155996	1155997	chr2:1155997:C:A	rs12714395	C	A	A	Sox2_MA0143.3	20	0	-	0	0	.
chr2	1220408	1220409	chr2:1220409:C:T	rs568358257	C	T	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr2	1230483	1230484	chr2:1230484:C:T	rs7567477	C	T	C	Sox2_MA0143.3	19	0	+	0	0	.
chr2	1423334	1423335	chr2:1423335:G:A	rs9678469	G	A	A	Sox2_MA0143.3	-2	0	-	0	0	.
chr2	1483017	1483018	chr2:1483018:T:C	rs74332671	T	C	T	Sox2_MA0143.3	2	1	-	9.613475778572903	3.494828071296623	CCATTGTT
chr2	1484334	1484335	chr2:1484335:T:C	rs28910607	T	C	C	Sox2_MA0143.3	21	0	+	0	0	.
chr2	1488280	1488281	chr2:1488281:A:G	rs28911485	A	G	A	Sox2_MA0143.3	6	1	-	9.019595766176417	2.110840986861197	CCATTGTC
chr2	1488296	1488297	chr2:1488297:A:G	rs938327	A	G	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr2	1537790	1537791	chr2:1537791:T:G	rs72776278	T	G	-	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr2	1542300	1542301	chr2:1542301:G:A	rs28915684	G	A	G	Sox2_MA0143.3	-9	0	+	0	0	.
chr2	1554388	1554389	chr2:1554389:A:G	rs6744743	A	G	A	Sox2_MA0143.3	18	0	-	0	0	.
chr2	1573803	1573804	chr2:1573804:A:G	rs13388687	A	G	A	Sox2_MA0143.3	-18	0	-	0	0	.
chr2	1736863	1736864	chr2:1736864:T:G	rs13012078	T	G	T	Sox2_MA0143.3	16	0	-	0	0	.
chr2	1743984	1743985	chr2:1743985:G:A	rs531397929	G	A	G	Sox2_MA0143.3	8	0	-	0	0	.
chr2	1744053	1744054	chr2:1744054:A:G	rs73182756	A	G	G	Sox2_MA0143.3	7	1	-	9.800647049772198	9.206767037375712	CCTTTGTT
chr2	1782427	1782428	chr2:1782428:G:A	rs6759577	G	A	G	Sox2_MA0143.3	20	0	-	0	0	.
chr2	1802664	1802665	chr2:1802665:A:G	rs1208482445	A	G	A	Sox2_MA0143.3	4	1	-	3.5547341015215945	-3.3540206777936254	CCTTTGTA
chr2	1803674	1803675	chr2:1803675:C:T	rs78242941	C	T	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr2	1819039	1819040	chr2:1819040:T:C	rs7595248	T	C	C	Sox2_MA0143.3	25	0	-	0	0	.
chr2	1948803	1948804	chr2:1948804:C:T	rs919718	C	T	C	Sox2_MA0143.3	1	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr2	1982321	1982322	chr2:1982322:T:A	rs10187245	T	A	A	Sox2_MA0143.3	13	0	+	0	0	.
chr2	1990556	1990557	chr2:1990557:T:G	rs114818184	T	G	T	Sox2_MA0143.3	-10	0	+	0	0	.
chr2	1990953	1990954	chr2:1990954:C:T	rs113513870	C	T	T	Sox2_MA0143.3	-11	0	+	0	0	.
chr2	2012600	2012601	chr2:2012601:A:G	rs80153251	A	G	A	Sox2_MA0143.3	12	0	-	0	0	.
chr2	2057476	2057477	chr2:2057477:C:T	rs115990997	C	T	C	Sox2_MA0143.3	19	0	+	0	0	.
chr2	2401157	2401158	chr2:2401158:G:A	rs4381808	G	A	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr2	2460810	2460811	chr2:2460811:T:C	rs823546	T	C	C	Sox2_MA0143.3	24	0	+	0	0	.
chr2	2472909	2472910	chr2:2472910:C:T	rs13009488	C	T	T	Sox2_MA0143.3	13	0	-	0	0	.
chr2	2483907	2483908	chr2:2483908:T:C	rs6739131	T	C	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr2	2517778	2517779	chr2:2517779:A:C	rs908357	A	C	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr2	2518633	2518634	chr2:2518634:T:C	rs7572759	T	C	T	Sox2_MA0143.3	-1	0	-	0	0	.
chr2	2524769	2524770	chr2:2524770:T:C	rs62104316	T	C	T	Sox2_MA0143.3	-14	0	+	0	0	.
chr2	2525349	2525350	chr2:2525350:G:A	rs4853930	G	A	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr2	2529715	2529716	chr2:2529716:C:G	rs11676482	C	G	G	Sox2_MA0143.3	15	0	+	0	0	.
chr2	2546997	2546998	chr2:2546998:A:G	rs6750616	A	G	G	Sox2_MA0143.3	17	0	-	0	0	.
chr2	2547027	2547028	chr2:2547028:C:T	rs116147149	C	T	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr2	2564409	2564410	chr2:2564410:G:A	rs6715098	G	A	G	Sox2_MA0143.3	16	0	-	0	0	.
chr2	2564441	2564442	chr2:2564442:C:T	rs566561785	C	T	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr2	2564442	2564443	chr2:2564443:G:A	rs72771202	G	A	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr2	2578293	2578294	chr2:2578294:A:G	rs116301865	A	G	A	Sox2_MA0143.3	-5	0	+	0	0	.
chr2	2601037	2601038	chr2:2601038:G:C	rs10192503	G	C	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr2	2605199	2605200	chr2:2605200:T:G	rs4853904	T	G	G	Sox2_MA0143.3	4	1	+	8.676919043985553	1.7681642646703322	CCATTGTG
chr2	2612412	2612413	chr2:2612413:A:C	rs6548080	A	C	A	Sox2_MA0143.3	-7	0	-	0	0	.
chr2	2620266	2620267	chr2:2620267:C:T	rs74550043	C	T	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr2	2708953	2708954	chr2:2708954:T:C	rs7589818	T	C	T	Sox2_MA0143.3	2	1	+	9.800647049772198	3.494828071296623	CCTTTGTT
chr2	2769791	2769792	chr2:2769792:G:A	rs72774998	G	A	G	Sox2_MA0143.3	0	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr2	2836062	2836063	chr2:2836063:G:A	rs10194478	G	A	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr2	2961124	2961125	chr2:2961125:G:A	rs116230685	G	A	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr2	3010421	3010422	chr2:3010422:T:C	rs112831197	T	C	T	Sox2_MA0143.3	17	0	+	0	0	.
chr2	3024816	3024817	chr2:3024817:A:C	rs28718907	A	C	A	Sox2_MA0143.3	14	0	+	0	0	.
chr2	3024824	3024825	chr2:3024825:A:T	rs28608978	A	T	T	Sox2_MA0143.3	22	0	+	0	0	.
chr2	3034902	3034903	chr2:3034903:A:G	rs62119777	A	G	A	Sox2_MA0143.3	4	1	-	8.864090315184848	1.9553355358696274	CCTTTGTG
chr2	3041059	3041060	chr2:3041060:T:C	rs56799760	T	C	C	Sox2_MA0143.3	9	0	-	0	0	.
chr2	3101005	3101006	chr2:3101006:G:A	rs2368685	G	A	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr2	3101022	3101023	chr2:3101023:G:C	rs2368686	G	C	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr2	3108888	3108889	chr2:3108889:C:A	rs77090896	C	A	C	Sox2_MA0143.3	13	0	-	0	0	.
chr2	3197645	3197646	chr2:3197646:G:A	rs7563563	G	A	G	Sox2_MA0143.3	22	0	-	0	0	.
chr2	3210050	3210051	chr2:3210051:A:G	rs4854106	A	G	G	Sox2_MA0143.3	24	0	-	0	0	.
chr2	3223254	3223255	chr2:3223255:G:A	rs72763767	G	A	G	Sox2_MA0143.3	-3	0	-	0	0	.
chr2	3363252	3363253	chr2:3363253:C:T	rs59475246	C	T	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr2	3486502	3486503	chr2:3486503:T:G	rs13019831	T	G	G	Sox2_MA0143.3	24	0	+	0	0	.
chr2	3550383	3550384	chr2:3550384:T:C	rs10186193	T	C	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr2	3550794	3550795	chr2:3550795:C:T	rs138940735	C	T	C	Sox2_MA0143.3	-12	0	-	0	0	.
chr2	3550976	3550977	chr2:3550977:G:A	rs6730125	G	A	G	Sox2_MA0143.3	21	0	-	0	0	.
chr2	3550977	3550978	chr2:3550978:G:A	rs6730126	G	A	G	Sox2_MA0143.3	20	0	-	0	0	.
chr2	3558816	3558817	chr2:3558817:A:G	rs192700931	A	G	A	Sox2_MA0143.3	19	0	-	0	0	.
chr2	3558845	3558846	chr2:3558846:G:C	rs11538545	G	C	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr2	3612063	3612064	chr2:3612064:T:C	rs184785110	T	C	T	Sox2_MA0143.3	19	0	-	0	0	.
chr2	3626057	3626058	chr2:3626058:G:A	rs10170348	G	A	G	Sox2_MA0143.3	-11	0	+	0	0	.
chr2	3652452	3652453	chr2:3652453:G:A	rs115397616	G	A	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr2	3674659	3674660	chr2:3674660:T:C	rs12711967	T	C	C	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr2	3727824	3727825	chr2:3727825:A:G	rs796619036	A	G	A	Sox2_MA0143.3	11	0	+	0	0	.
chr2	3746932	3746933	chr2:3746933:C:T	rs357976	C	T	C	Sox2_MA0143.3	14	0	-	0	0	.
chr2	3805355	3805356	chr2:3805356:G:A	rs111424890	G	A	G	Sox2_MA0143.3	1	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr2	4090400	4090401	chr2:4090401:T:G	rs6759055	T	G	T	Sox2_MA0143.3	-8	0	+	0	0	.
chr2	4151751	4151752	chr2:4151752:C:T	rs1401330	C	T	C	Sox2_MA0143.3	24	0	-	0	0	.
chr2	4381495	4381496	chr2:4381496:G:A	rs112620424	G	A	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr2	4381502	4381503	chr2:4381503:A:G	rs59036826	A	G	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr2	4828901	4828902	chr2:4828902:G:A	rs553551342	G	A	G	Sox2_MA0143.3	7	1	-	9.019595766176417	9.613475778572903	CCATTGTC
chr2	4828902	4828903	chr2:4828903:A:G	rs12478998	A	G	G	Sox2_MA0143.3	6	1	-	9.019595766176417	2.110840986861197	CCATTGTC
chr2	4903957	4903958	chr2:4903958:G:A	rs7603132	G	A	G	Sox2_MA0143.3	19	0	-	0	0	.
chr2	4904190	4904191	chr2:4904191:C:T	rs7577823	C	T	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr2	4955663	4955664	chr2:4955664:C:A	rs75433541	C	A	C	Sox2_MA0143.3	5	1	-	9.019595766176417	2.110840986861197	CCATTGTC
chr2	5086855	5086856	chr2:5086856:A:G	rs1453780	A	G	A	Sox2_MA0143.3	3	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr2	5114051	5114052	chr2:5114052:T:G	rs6761134	T	G	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr2	5692009	5692010	chr2:5692010:C:T	rs151305167	C	T	C	Sox2_MA0143.3	18	0	-	0	0	.
chr2	5692035	5692036	chr2:5692036:G:A	chr2:5692036:G:A	G	A	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr2	5763743	5763744	chr2:5763744:G:A	rs1429245	G	A	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr2	5819412	5819413	chr2:5819413:A:G	rs1429234	A	G	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr2	5935549	5935550	chr2:5935550:G:A	rs4669966	G	A	G	Sox2_MA0143.3	9	0	+	0	0	.
chr2	5954682	5954683	chr2:5954683:A:G	rs56211642	A	G	G	Sox2_MA0143.3	-14	0	+	0	0	.
chr2	6008650	6008651	chr2:6008651:C:A	rs2693838	C	A	A	Sox2_MA0143.3	24	0	-	0	0	.
chr2	6054598	6054599	chr2:6054599:A:G	rs2609115	A	G	G	Sox2_MA0143.3	-5	0	+	0	0	.
chr2	6081293	6081294	chr2:6081294:C:T	chr2:6081294:C:T	C	T	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr2	6237408	6237409	chr2:6237409:C:T	rs6731694	C	T	C	Sox2_MA0143.3	11	0	-	0	0	.
chr2	6237409	6237410	chr2:6237410:A:G	rs6431776	A	G	G	Sox2_MA0143.3	10	0	-	0	0	.
chr2	6237424	6237425	chr2:6237425:T:C	rs13005294	T	C	T	Sox2_MA0143.3	-5	0	-	0	0	.
chr2	6237604	6237605	chr2:6237605:A:G	rs6431778	A	G	G	Sox2_MA0143.3	12	0	-	0	0	.
chr2	6263495	6263496	chr2:6263496:G:T	rs13405316	G	T	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr2	6266685	6266686	chr2:6266686:A:G	rs12993257	A	G	A	Sox2_MA0143.3	-2	0	-	0	0	.
chr2	6343375	6343376	chr2:6343376:T:C	rs76115163	T	C	T	Sox2_MA0143.3	23	0	-	0	0	.
chr2	6445282	6445283	chr2:6445283:C:T	rs306188	C	T	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr2	6525437	6525438	chr2:6525438:A:G	rs13018243	A	G	A	Sox2_MA0143.3	23	0	+	0	0	.
chr2	6526912	6526913	chr2:6526913:T:G	rs13014353	T	G	T	Sox2_MA0143.3	-13	0	+	0	0	.
chr2	6526913	6526914	chr2:6526914:A:T	rs13008796	A	T	A	Sox2_MA0143.3	-12	0	+	0	0	.
chr2	6606287	6606288	chr2:6606288:G:A	rs148092744	G	A	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr2	6676886	6676887	chr2:6676887:T:C	rs75476645	T	C	T	Sox2_MA0143.3	13	0	+	0	0	.
chr2	6694818	6694819	chr2:6694819:G:A	rs10929447	G	A	G	Sox2_MA0143.3	14	0	-	0	0	.
chr2	6750970	6750971	chr2:6750971:T:C	rs186946801	T	C	T	Sox2_MA0143.3	16	0	-	0	0	.
chr2	6781326	6781327	chr2:6781327:C:T	rs142266729	C	T	C	Sox2_MA0143.3	13	0	-	0	0	.
chr2	6782651	6782652	chr2:6782652:C:T	rs11683777	C	T	C	Sox2_MA0143.3	0	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr2	6917660	6917661	chr2:6917661:G:C	rs182920261	G	C	G	Sox2_MA0143.3	20	0	+	0	0	.
chr2	6925388	6925389	chr2:6925389:G:T	rs771288	G	T	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr2	6986437	6986438	chr2:6986438:G:A	rs700943	G	A	C	Sox2_MA0143.3	10	0	+	0	0	.
chr2	7027659	7027660	chr2:7027660:G:A	rs2280337	G	A	a	Sox2_MA0143.3	-18	0	+	0	0	.
chr2	7027673	7027674	chr2:7027674:T:A	rs2037325	T	A	t	Sox2_MA0143.3	-4	0	+	0	0	.
chr2	7034586	7034587	chr2:7034587:T:C	rs441241	T	C	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr2	7034613	7034614	chr2:7034614:G:A	rs12476778	G	A	G	Sox2_MA0143.3	12	0	+	0	0	.
chr2	7049528	7049529	chr2:7049529:T:G	rs309291	T	G	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr2	7109446	7109447	chr2:7109447:G:A	rs6746186	G	A	G	Sox2_MA0143.3	12	0	+	0	0	.
chr2	7180809	7180810	chr2:7180810:C:A	rs1283362776	C	A	C	Sox2_MA0143.3	0	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr2	7188610	7188611	chr2:7188611:T:A	rs114582712	T	A	T	Sox2_MA0143.3	9	0	-	0	0	.
chr2	7431272	7431273	chr2:7431273:G:A	rs749749129	G	A	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr2	7594699	7594700	chr2:7594700:T:C	rs7596755	T	C	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr2	7693541	7693542	chr2:7693542:G:C	rs700949	G	C	G	Sox2_MA0143.3	1	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr2	7725217	7725218	chr2:7725218:A:G	rs56162325	A	G	A	Sox2_MA0143.3	21	0	-	0	0	.
chr2	7736999	7737000	chr2:7737000:G:A	rs1656168	G	A	G	Sox2_MA0143.3	19	0	-	0	0	.
chr2	7738775	7738776	chr2:7738776:A:G	rs700945	A	G	a	Sox2_MA0143.3	14	0	-	0	0	.
chr2	7836201	7836202	chr2:7836202:C:A	rs16866483	C	A	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr2	7836960	7836961	chr2:7836961:T:C	rs28698084	T	C	T	Sox2_MA0143.3	-15	0	+	0	0	.
chr2	7836979	7836980	chr2:7836980:T:C	rs798418	T	C	T	Sox2_MA0143.3	4	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr2	7950511	7950512	chr2:7950512:C:T	rs148778449	C	T	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr2	8008634	8008635	chr2:8008635:G:A	rs13426351	G	A	G	Sox2_MA0143.3	1	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr2	8046343	8046344	chr2:8046344:G:A	rs6748904	G	A	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr2	8097296	8097297	chr2:8097297:C:T	rs146878403	C	T	C	Sox2_MA0143.3	7	1	-	8.864090315184848	3.5547341015215945	CCTTTGTG
chr2	8115752	8115753	chr2:8115753:G:A	rs12617836	G	A	G	Sox2_MA0143.3	10	0	+	0	0	.
chr2	8150588	8150589	chr2:8150589:C:T	rs11695288	C	T	T	Sox2_MA0143.3	14	0	-	0	0	.
chr2	8154613	8154614	chr2:8154614:C:T	rs528757757	C	T	C	Sox2_MA0143.3	20	0	-	0	0	.
chr2	8154647	8154648	chr2:8154648:G:A	rs181136	G	A	A	Sox2_MA0143.3	-14	0	-	0	0	.
chr2	8205100	8205101	chr2:8205101:A:G	rs7577544	A	G	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr2	8233142	8233143	chr2:8233143:T:C	rs1034381	T	C	t	Sox2_MA0143.3	-17	0	+	0	0	.
chr2	8301094	8301095	chr2:8301095:T:C	rs3097287	T	C	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr2	8306246	8306247	chr2:8306247:A:G	rs4315494	A	G	A	Sox2_MA0143.3	-17	0	-	0	0	.
chr2	8335532	8335533	chr2:8335533:C:G	rs2562002	C	G	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr2	8362672	8362673	chr2:8362673:A:T	rs3102942	A	T	T	Sox2_MA0143.3	-6	0	+	0	0	.
chr2	8396147	8396148	chr2:8396148:C:T	rs28733815	C	T	C	Sox2_MA0143.3	19	0	-	0	0	.
chr2	8409779	8409780	chr2:8409780:A:G	rs6744484	A	G	A	Sox2_MA0143.3	12	0	-	0	0	.
chr2	8412825	8412826	chr2:8412826:A:G	chr2:8412826:A:G	A	G	A	Sox2_MA0143.3	15	0	+	0	0	.
chr2	8450451	8450452	chr2:8450452:G:A	rs111918294	G	A	G	Sox2_MA0143.3	9	0	+	0	0	.
chr2	8469950	8469951	chr2:8469951:A:G	rs6431941	A	G	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr2	8477052	8477053	chr2:8477053:G:A	rs79227092	G	A	G	Sox2_MA0143.3	16	0	-	0	0	.
chr2	8488142	8488143	chr2:8488143:G:A	rs138343344	G	A	G	Sox2_MA0143.3	-5	0	+	0	0	.
chr2	8526069	8526070	chr2:8526070:A:G	rs60015971	A	G	A	Sox2_MA0143.3	-11	0	-	0	0	.
chr2	8548664	8548665	chr2:8548665:T:C	rs7590197	T	C	T	Sox2_MA0143.3	-8	0	+	0	0	.
chr2	8571194	8571195	chr2:8571195:G:A	rs11675623	G	A	g	Sox2_MA0143.3	-7	0	+	0	0	.
chr2	8581728	8581729	chr2:8581729:C:T	rs150910413	C	T	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr2	8612817	8612818	chr2:8612818:C:T	rs12692365	C	T	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr2	8631326	8631327	chr2:8631327:C:G	rs62105498	C	G	C	Sox2_MA0143.3	7	1	+	9.206767037375712	8.864090315184848	CCTTTGTC
chr2	8646437	8646438	chr2:8646438:C:T	rs3856451	C	T	C	Sox2_MA0143.3	17	0	+	0	0	.
chr2	8675605	8675606	chr2:8675606:G:A	rs6737440	G	A	A	Sox2_MA0143.3	-18	0	-	0	0	.
chr2	8677209	8677210	chr2:8677210:G:A	rs544940745	G	A	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr2	8677240	8677241	chr2:8677241:C:A	rs1403221317	C	A	C	Sox2_MA0143.3	18	0	+	0	0	.
chr2	8797889	8797890	chr2:8797890:C:G	rs7602942	C	G	C	Sox2_MA0143.3	9	0	-	0	0	.
chr2	8836998	8836999	chr2:8836999:C:G	rs147344413	C	G	C	Sox2_MA0143.3	16	0	-	0	0	.
chr2	9004208	9004209	chr2:9004209:G:A	rs62119999	G	A	A	Sox2_MA0143.3	23	0	-	0	0	.
chr2	9004240	9004241	chr2:9004241:G:A	rs1057160454	G	A	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr2	9033353	9033354	chr2:9033354:C:T	rs965254	C	T	C	Sox2_MA0143.3	-20	0	-	0	0	.
chr2	9050325	9050326	chr2:9050326:C:A	rs78379243	C	A	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr2	9153696	9153697	chr2:9153697:A:G	rs558823074	A	G	A	Sox2_MA0143.3	-6	0	+	0	0	.
chr2	9170805	9170806	chr2:9170806:T:G	rs1427212354	T	G	T	Sox2_MA0143.3	2	1	+	3.5547341015215945	-2.751084876953981	CCTTTGTA
chr2	9206996	9206997	chr2:9206997:C:G	rs939648242	C	G	c	Sox2_MA0143.3	15	0	+	0	0	.
chr2	9210201	9210202	chr2:9210202:G:A	rs186416392	G	A	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr2	9218272	9218273	chr2:9218273:A:G	rs10195639	A	G	G	Sox2_MA0143.3	8	0	+	0	0	.
chr2	9245838	9245839	chr2:9245839:T:C	rs11678445	T	C	T	Sox2_MA0143.3	23	0	+	0	0	.
chr2	9262975	9262976	chr2:9262976:C:A	rs79486305	C	A	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr2	9306622	9306623	chr2:9306623:T:C	rs28575639	T	C	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr2	9318051	9318052	chr2:9318052:A:G	rs13414373	A	G	a	Sox2_MA0143.3	-15	0	+	0	0	.
chr2	9594807	9594808	chr2:9594808:T:C	rs116458725	T	C	T	Sox2_MA0143.3	-8	0	-	0	0	.
chr2	9631481	9631482	chr2:9631482:C:T	rs951870367	C	T	C	Sox2_MA0143.3	23	0	-	0	0	.
chr2	9631490	9631491	chr2:9631491:T:C	rs10203320	T	C	T	Sox2_MA0143.3	14	0	-	0	0	.
chr2	9675469	9675470	chr2:9675470:G:C	rs4669414	G	C	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr2	9696147	9696148	chr2:9696148:T:C	rs62117984	T	C	T	Sox2_MA0143.3	-15	0	-	0	0	.
chr2	9699961	9699962	chr2:9699962:C:A	rs12475613	C	A	C	Sox2_MA0143.3	0	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr2	9707931	9707932	chr2:9707932:G:A	rs137946941	G	A	G	Sox2_MA0143.3	-3	0	+	0	0	.
chr2	9736419	9736420	chr2:9736420:C:G	rs4669446	C	G	G	Sox2_MA0143.3	-14	0	+	0	0	.
chr2	9753572	9753573	chr2:9753573:G:C	rs67071207	G	C	G	Sox2_MA0143.3	14	0	+	0	0	.
chr2	9758997	9758998	chr2:9758998:G:A	rs16867150	G	A	G	Sox2_MA0143.3	26	0	+	0	0	.
chr2	9778242	9778243	chr2:9778243:C:T	rs59950713	C	T	-	Sox2_MA0143.3	17	0	-	0	0	.
chr2	9832820	9832821	chr2:9832821:A:G	rs114425126	A	G	A	Sox2_MA0143.3	2	1	+	8.676919043985553	2.5582713367092715	CCATTGTG
chr2	9846032	9846033	chr2:9846033:C:T	rs287987	C	T	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr2	9883923	9883924	chr2:9883924:C:G	rs12468621	C	G	C	Sox2_MA0143.3	1	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr2	9883929	9883930	chr2:9883930:G:T	rs12476490	G	T	G	Sox2_MA0143.3	7	1	+	8.864090315184848	9.800647049772198	CCTTTGTG
chr2	9892167	9892168	chr2:9892168:G:A	rs450643	G	A	A	Sox2_MA0143.3	-1	0	+	0	0	.
chr2	9897643	9897644	chr2:9897644:T:G	rs183670021	T	G	T	Sox2_MA0143.3	20	0	+	0	0	.
chr2	9940424	9940425	chr2:9940425:C:T	rs6721644	C	T	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr2	9953715	9953716	chr2:9953716:C:T	rs112118012	C	T	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr2	10121908	10121909	chr2:10121909:C:T	rs72542775	C	T	C	Sox2_MA0143.3	5	1	-	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr2	10125681	10125682	chr2:10125682:C:A	rs7577887	C	A	A	Sox2_MA0143.3	18	0	-	0	0	.
chr2	10125684	10125685	chr2:10125685:G:A	rs7603436	G	A	A	Sox2_MA0143.3	15	0	-	0	0	.
chr2	10151151	10151152	chr2:10151152:A:G	rs2160190	A	G	G	Sox2_MA0143.3	3	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr2	10220896	10220897	chr2:10220897:A:C	rs11676328	A	C	A	Sox2_MA0143.3	25	0	-	0	0	.
chr2	10236887	10236888	chr2:10236888:G:C	rs2357471	G	C	G	Sox2_MA0143.3	26	0	+	0	0	.
chr2	10376248	10376249	chr2:10376249:T:C	rs77449089	T	C	T	Sox2_MA0143.3	6	1	+	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr2	10411260	10411261	chr2:10411261:A:G	rs3771124	A	G	G	Sox2_MA0143.3	19	0	-	0	0	.
chr2	10476584	10476585	chr2:10476585:T:G	rs73180511	T	G	G	Sox2_MA0143.3	15	0	+	0	0	.
chr2	10477345	10477346	chr2:10477346:A:G	rs73180515	A	G	A	Sox2_MA0143.3	18	0	-	0	0	.
chr2	10514840	10514841	chr2:10514841:C:T	rs116337919	C	T	C	Sox2_MA0143.3	22	0	+	0	0	.
chr2	10765464	10765465	chr2:10765465:G:A	rs72777378	G	A	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr2	10772321	10772322	chr2:10772322:C:A	rs16856614	C	A	C	Sox2_MA0143.3	17	0	-	0	0	.
chr2	10778082	10778083	chr2:10778083:C:T	rs10929699	C	T	c	Sox2_MA0143.3	26	0	+	0	0	.
chr2	10810538	10810539	chr2:10810539:T:C	rs1489613	T	C	T	Sox2_MA0143.3	-10	0	+	0	0	.
chr2	10814889	10814890	chr2:10814890:C:A	rs866688410	C	A	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr2	10891661	10891662	chr2:10891662:A:G	rs1882646	A	G	A	Sox2_MA0143.3	26	0	+	0	0	.
chr2	10909755	10909756	chr2:10909756:C:G	rs73184557	C	G	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr2	10932759	10932760	chr2:10932760:A:C	chr2:10932760:A:C	A	C	A	Sox2_MA0143.3	-5	0	+	0	0	.
chr2	10944452	10944453	chr2:10944453:A:T	rs12052930	A	T	A	Sox2_MA0143.3	21	0	-	0	0	.
chr2	10971019	10971020	chr2:10971020:C:A	rs12611688	C	A	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr2	10977123	10977124	chr2:10977124:G:A	rs72781487	G	A	G	Sox2_MA0143.3	5	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr2	11004512	11004513	chr2:11004513:T:A	rs17366006	T	A	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr2	11021417	11021418	chr2:11021418:A:G	rs11903722	A	G	A	Sox2_MA0143.3	-15	0	+	0	0	.
chr2	11099487	11099488	chr2:11099488:G:C	rs78970649	G	C	G	Sox2_MA0143.3	5	1	+	9.019595766176417	2.110840986861197	CCATTGTC
chr2	11099491	11099492	chr2:11099492:C:T	rs62120103	C	T	C	Sox2_MA0143.3	9	0	+	0	0	.
chr2	11110371	11110372	chr2:11110372:T:C	rs10167253	T	C	T	Sox2_MA0143.3	7	1	-	3.5547341015215945	8.864090315184848	CCTTTGTA
chr2	11128372	11128373	chr2:11128373:C:A	rs73187678	C	A	C	Sox2_MA0143.3	25	0	+	0	0	.
chr2	11129809	11129810	chr2:11129810:C:T	rs73917322	C	T	c	Sox2_MA0143.3	20	0	-	0	0	.
chr2	11228539	11228540	chr2:11228540:T:C	rs13393192	T	C	C	Sox2_MA0143.3	8	0	-	0	0	.
chr2	11391763	11391764	chr2:11391764:G:T	rs6714502	G	T	T	Sox2_MA0143.3	-1	0	+	0	0	.
chr2	11392046	11392047	chr2:11392047:G:A	chr2:11392047:G:A	G	A	G	Sox2_MA0143.3	-5	0	+	0	0	.
chr2	11435386	11435387	chr2:11435387:A:G	rs374310205	A	G	A	Sox2_MA0143.3	-18	0	+	0	0	.
chr2	11466789	11466790	chr2:11466790:A:G	rs80057977	A	G	A	Sox2_MA0143.3	-17	0	+	0	0	.
chr2	11473850	11473851	chr2:11473851:A:G	rs73917220	A	G	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr2	11479547	11479548	chr2:11479548:A:G	rs4669730	A	G	A	Sox2_MA0143.3	-14	0	-	0	0	.
chr2	11532855	11532856	chr2:11532856:A:C	rs371449538	A	C	A	Sox2_MA0143.3	12	0	+	0	0	.
chr2	11585191	11585192	chr2:11585192:A:G	rs116549799	A	G	A	Sox2_MA0143.3	11	0	-	0	0	.
chr2	11677347	11677348	chr2:11677348:C:A	rs80226034	C	A	C	Sox2_MA0143.3	25	0	-	0	0	.
chr2	11691140	11691141	chr2:11691141:G:C	rs111438945	G	C	G	Sox2_MA0143.3	5	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr2	11746630	11746631	chr2:11746631:G:A	chr2:11746631:G:A	G	A	G	Sox2_MA0143.3	18	0	-	0	0	.
chr2	11746632	11746633	chr2:11746633:T:G	chr2:11746633:T:G	T	G	T	Sox2_MA0143.3	16	0	-	0	0	.
chr2	11762334	11762335	chr2:11762335:G:A	chr2:11762335:G:A	G	A	G	Sox2_MA0143.3	26	0	-	0	0	.
chr2	11829129	11829130	chr2:11829130:G:C	rs72775824	G	C	G	Sox2_MA0143.3	-9	0	+	0	0	.
chr2	11863774	11863775	chr2:11863775:C:G	rs540638543	C	G	C	Sox2_MA0143.3	12	0	+	0	0	.
chr2	11866063	11866064	chr2:11866064:G:C	rs57283582	G	C	C	Sox2_MA0143.3	5	1	+	9.206767037375712	2.298012258060492	CCTTTGTC
chr2	11892002	11892003	chr2:11892003:C:G	rs28505930	C	G	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr2	11892009	11892010	chr2:11892010:C:A	rs7587240	C	A	C	Sox2_MA0143.3	0	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr2	12007049	12007050	chr2:12007050:G:C	rs12692450	G	C	.	Sox2_MA0143.3	1	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr2	12007067	12007068	chr2:12007068:G:C	rs55819742	G	C	.	Sox2_MA0143.3	-17	0	-	0	0	.
chr2	12033174	12033175	chr2:12033175:A:G	rs4600620	A	G	.	Sox2_MA0143.3	-13	0	+	0	0	.
chr2	12079440	12079441	chr2:12079441:A:G	rs62113831	A	G	A	Sox2_MA0143.3	6	1	-	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr2	12142486	12142487	chr2:12142487:G:A	rs12692465	G	A	A	Sox2_MA0143.3	26	0	-	0	0	.
chr2	12161263	12161264	chr2:12161264:C:T	rs114043364	C	T	C	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr2	12288071	12288072	chr2:12288072:G:A	rs34568220	G	A	G	Sox2_MA0143.3	12	0	-	0	0	.
chr2	12318878	12318879	chr2:12318879:T:C	rs574601656	T	C	T	Sox2_MA0143.3	-6	0	+	0	0	.
chr2	12318887	12318888	chr2:12318888:T:C	rs1022206472	T	C	T	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr2	12347657	12347658	chr2:12347658:T:C	rs1453500	T	C	T	Sox2_MA0143.3	-1	0	+	0	0	.
chr2	12367986	12367987	chr2:12367987:T:C	rs62115664	T	C	T	Sox2_MA0143.3	17	0	+	0	0	.
chr2	12383113	12383114	chr2:12383114:C:T	rs59696056	C	T	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr2	12419889	12419890	chr2:12419890:G:T	rs573951635	G	T	G	Sox2_MA0143.3	12	0	+	0	0	.
chr2	12516151	12516152	chr2:12516152:G:A	rs62126677	G	A	G	Sox2_MA0143.3	19	0	+	0	0	.
chr2	12589972	12589973	chr2:12589973:C:G	rs75741858	C	G	C	Sox2_MA0143.3	27	0	+	0	0	.
chr2	12651719	12651720	chr2:12651720:A:G	rs79864440	A	G	A	Sox2_MA0143.3	-7	0	+	0	0	.
chr2	12676751	12676752	chr2:12676752:T:C	rs62124716	T	C	T	Sox2_MA0143.3	-18	0	+	0	0	.
chr2	12718975	12718976	chr2:12718976:T:C	chr2:12718976:T:C	T	C	T	Sox2_MA0143.3	-15	0	+	0	0	.
chr2	12718992	12718993	chr2:12718993:A:C	chr2:12718993:A:C	A	C	A	Sox2_MA0143.3	2	1	+	9.613475778572903	3.494828071296623	CCATTGTT
chr2	12719075	12719076	chr2:12719076:T:C	chr2:12719076:T:C	T	C	T	Sox2_MA0143.3	-14	0	-	0	0	.
chr2	12733429	12733430	chr2:12733430:G:A	rs11902337	G	A	G	Sox2_MA0143.3	8	0	-	0	0	.
chr2	12757346	12757347	chr2:12757347:C:T	rs73914133	C	T	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr2	12868493	12868494	chr2:12868494:C:T	rs62124483	C	T	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr2	13489196	13489197	chr2:13489197:T:G	rs4633902	T	G	t	Sox2_MA0143.3	6	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr2	13512605	13512606	chr2:13512606:T:C	rs12999397	T	C	C	Sox2_MA0143.3	20	0	+	0	0	.
chr2	13538314	13538315	chr2:13538315:T:C	rs7587379	T	C	T	Sox2_MA0143.3	22	0	+	0	0	.
chr2	13592542	13592543	chr2:13592543:C:T	rs72773683	C	T	T	Sox2_MA0143.3	-7	0	-	0	0	.
chr2	13651946	13651947	chr2:13651947:C:T	rs1510829	C	T	T	Sox2_MA0143.3	-1	0	+	0	0	.
chr2	13676777	13676778	chr2:13676778:C:T	rs1567510	C	T	c	Sox2_MA0143.3	14	0	-	0	0	.
chr2	13710481	13710482	chr2:13710482:C:A	rs12999435	C	A	C	Sox2_MA0143.3	1	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr2	13714805	13714806	chr2:13714806:G:A	rs576386297	G	A	A	Sox2_MA0143.3	-18	0	+	0	0	.
chr2	14121138	14121139	chr2:14121139:T:C	rs113401514	T	C	T	Sox2_MA0143.3	4	1	+	9.206767037375712	2.2980122580604916	CCTTTGTC
chr2	14165861	14165862	chr2:14165862:T:C	rs2380559	T	C	C	Sox2_MA0143.3	2	1	-	8.676919043985553	2.5582713367092715	CCATTGTG
chr2	14232366	14232367	chr2:14232367:T:C	rs1016122	T	C	T	Sox2_MA0143.3	15	0	-	0	0	.
chr2	14340888	14340889	chr2:14340889:C:A	rs4510188	C	A	C	Sox2_MA0143.3	11	0	+	0	0	.
chr2	14423534	14423535	chr2:14423535:A:C	rs13012229	A	C	C	Sox2_MA0143.3	18	0	+	0	0	.
chr2	14423538	14423539	chr2:14423539:C:T	rs79204149	C	T	C	Sox2_MA0143.3	22	0	+	0	0	.
chr2	14713345	14713346	chr2:14713346:C:T	chr2:14713346:C:T	C	T	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr2	14737755	14737756	chr2:14737756:T:C	rs2714242	T	C	C	Sox2_MA0143.3	17	0	-	0	0	.
chr2	14756661	14756662	chr2:14756662:G:T	rs1865455	G	T	G	Sox2_MA0143.3	7	1	+	8.864090315184848	9.800647049772198	CCTTTGTG
chr2	14884969	14884970	chr2:14884970:G:A	rs4670032	G	A	G	Sox2_MA0143.3	11	0	-	0	0	.
chr2	14925103	14925104	chr2:14925104:T:C	rs10180134	T	C	T	Sox2_MA0143.3	9	0	-	0	0	.
chr2	14930769	14930770	chr2:14930770:G:C	rs1996539	G	C	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr2	14990926	14990927	chr2:14990927:G:C	rs6746909	G	C	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr2	15138436	15138437	chr2:15138437:A:G	rs11688502	A	G	A	Sox2_MA0143.3	18	0	-	0	0	.
chr2	15142446	15142447	chr2:15142447:C:T	rs2193908	C	T	C	Sox2_MA0143.3	22	0	-	0	0	.
chr2	15241408	15241409	chr2:15241409:G:A	rs11681691	G	A	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr2	15378691	15378692	chr2:15378692:G:T	rs763356	G	T	T	Sox2_MA0143.3	25	0	-	0	0	.
chr2	15378713	15378714	chr2:15378714:A:G	rs763355	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr2	15438718	15438719	chr2:15438719:G:A	rs115274635	G	A	A	Sox2_MA0143.3	25	0	-	0	0	.
chr2	15522046	15522047	chr2:15522047:C:T	rs4668919	C	T	C	Sox2_MA0143.3	8	0	-	0	0	.
chr2	15570537	15570538	chr2:15570538:C:T	rs114977455	C	T	C	Sox2_MA0143.3	12	0	+	0	0	.
chr2	15574833	15574834	chr2:15574834:C:T	rs6750232	C	T	T	Sox2_MA0143.3	8	0	+	0	0	.
chr2	15672984	15672985	chr2:15672985:C:T	rs7557240	C	T	c	Sox2_MA0143.3	8	0	+	0	0	.
chr2	15681526	15681527	chr2:15681527:A:T	rs746032426	A	T	A	Sox2_MA0143.3	-13	0	-	0	0	.
chr2	15712722	15712723	chr2:15712723:T:C	rs16862954	T	C	T	Sox2_MA0143.3	3	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr2	15712723	15712724	chr2:15712724:T:C	rs111315219	T	C	T	Sox2_MA0143.3	4	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr2	15780387	15780388	chr2:15780388:C:T	rs72784908	C	T	C	Sox2_MA0143.3	27	0	+	0	0	.
chr2	15782320	15782321	chr2:15782321:C:T	rs60082005	C	T	C	Sox2_MA0143.3	-5	0	-	0	0	.
chr2	15802986	15802987	chr2:15802987:C:A	rs77335975	C	A	C	Sox2_MA0143.3	7	1	+	9.206767037375712	3.5547341015215945	CCTTTGTC
chr2	15818670	15818671	chr2:15818671:G:A	rs4471862	G	A	G	Sox2_MA0143.3	14	0	+	0	0	.
chr2	15818678	15818679	chr2:15818679:T:C	rs2380694	T	C	C	Sox2_MA0143.3	22	0	+	0	0	.
chr2	15825774	15825775	chr2:15825775:T:C	rs11900348	T	C	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr2	15920697	15920698	chr2:15920698:A:C	rs7608490	A	C	A	Sox2_MA0143.3	10	0	-	0	0	.
chr2	15947627	15947628	chr2:15947628:G:A	chr2:15947628:G:A	G	A	G	Sox2_MA0143.3	22	0	-	0	0	.
chr2	15973767	15973768	chr2:15973768:C:T	rs62116685	C	T	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr2	15973802	15973803	chr2:15973803:G:C	rs77155244	G	C	G	Sox2_MA0143.3	19	0	+	0	0	.
chr2	16019850	16019851	chr2:16019851:C:T	rs6727185	C	T	C	Sox2_MA0143.3	1	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr2	16030517	16030518	chr2:16030518:C:T	rs542018125	C	T	c	Sox2_MA0143.3	-16	0	+	0	0	.
chr2	16070176	16070177	chr2:16070177:A:G	rs143958757	A	G	A	Sox2_MA0143.3	-7	0	+	0	0	.
chr2	16070188	16070189	chr2:16070189:G:A	rs193217123	G	A	G	Sox2_MA0143.3	5	1	+	9.019595766176417	2.110840986861197	CCATTGTC
chr2	16070424	16070425	chr2:16070425:G:A	rs7569935	G	A	A	Sox2_MA0143.3	-7	0	+	0	0	.
chr2	16185151	16185152	chr2:16185152:C:G	rs11096716	C	G	G	Sox2_MA0143.3	20	0	+	0	0	.
chr2	16317393	16317394	chr2:16317394:T:C	rs114532313	T	C	T	Sox2_MA0143.3	-5	0	-	0	0	.
chr2	16317406	16317407	chr2:16317407:T:A	rs139646686	T	A	T	Sox2_MA0143.3	-18	0	-	0	0	.
chr2	16325746	16325747	chr2:16325747:C:T	rs113292416	C	T	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr2	16365013	16365014	chr2:16365014:A:G	rs13385414	A	G	A	Sox2_MA0143.3	23	0	+	0	0	.
chr2	16424085	16424086	chr2:16424086:G:A	rs1001129	G	A	A	Sox2_MA0143.3	13	0	-	0	0	.
chr2	16439168	16439169	chr2:16439169:C:A	rs6753768	C	A	A	Sox2_MA0143.3	11	0	+	0	0	.
chr2	16616390	16616391	chr2:16616391:C:T	rs12615415	C	T	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr2	16630764	16630765	chr2:16630765:A:C	rs11096685	A	C	A	Sox2_MA0143.3	27	0	-	0	0	.
chr2	16656072	16656073	chr2:16656073:G:A	rs72777956	G	A	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr2	16717922	16717923	chr2:16717923:G:A	rs798364	G	A	A	Sox2_MA0143.3	12	0	+	0	0	.
chr2	17303200	17303201	chr2:17303201:A:G	rs16983495	A	G	A	Sox2_MA0143.3	14	0	-	0	0	.
chr2	17303221	17303222	chr2:17303222:A:G	rs1040268	A	G	A	Sox2_MA0143.3	-7	0	-	0	0	.
chr2	17309905	17309906	chr2:17309906:A:T	rs112958938	A	T	A	Sox2_MA0143.3	7	1	+	3.5547341015215945	9.800647049772198	CCTTTGTA
chr2	17430470	17430471	chr2:17430471:T:C	rs147698583	T	C	T	Sox2_MA0143.3	26	0	-	0	0	.
chr2	17430485	17430486	chr2:17430486:T:C	rs1543196	T	C	T	Sox2_MA0143.3	11	0	-	0	0	.
chr2	17506961	17506962	chr2:17506962:G:A	rs75276793	G	A	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr2	17540240	17540241	chr2:17540241:C:T	rs192006462	C	T	C	Sox2_MA0143.3	23	0	-	0	0	.
chr2	17558070	17558071	chr2:17558071:G:A	rs62131503	G	A	G	Sox2_MA0143.3	18	0	-	0	0	.
chr2	17558083	17558084	chr2:17558084:C:T	rs149298584	C	T	C	Sox2_MA0143.3	5	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr2	17593238	17593239	chr2:17593239:T:C	rs79555391	T	C	T	Sox2_MA0143.3	20	0	-	0	0	.
chr2	17607522	17607523	chr2:17607523:G:C	rs62132144	G	C	G	Sox2_MA0143.3	12	0	+	0	0	.
chr2	18023631	18023632	chr2:18023632:C:A	rs2709990	C	A	C	Sox2_MA0143.3	22	0	-	0	0	.
chr2	18023671	18023672	chr2:18023672:T:C	rs2732924	T	C	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr2	18210390	18210391	chr2:18210391:G:T	rs140479222	G	T	G	Sox2_MA0143.3	5	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr2	18266678	18266679	chr2:18266679:G:A	rs6754763	G	A	A	Sox2_MA0143.3	21	0	-	0	0	.
chr2	18266702	18266703	chr2:18266703:C:T	rs117782272	C	T	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr2	18356865	18356866	chr2:18356866:C:T	rs6706705	C	T	C	Sox2_MA0143.3	1	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr2	18363088	18363089	chr2:18363089:C:T	rs13405944	C	T	C	Sox2_MA0143.3	26	0	+	0	0	.
chr2	18370366	18370367	chr2:18370367:C:T	rs11096533	C	T	T	Sox2_MA0143.3	25	0	-	0	0	.
chr2	18445013	18445014	chr2:18445014:T:C	rs13393878	T	C	C	Sox2_MA0143.3	6	1	+	8.676919043985553	1.7681642646703326	CCATTGTG
chr2	18480591	18480592	chr2:18480592:T:C	rs2345718	T	C	C	Sox2_MA0143.3	25	0	-	0	0	.
chr2	18498422	18498423	chr2:18498423:C:A	rs6709127	C	A	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr2	18684351	18684352	chr2:18684352:G:A	chr2:18684352:G:A	G	A	G	Sox2_MA0143.3	-3	0	-	0	0	.
chr2	18685014	18685015	chr2:18685015:A:G	rs6711174	A	G	A	Sox2_MA0143.3	-16	0	-	0	0	.
chr2	18702726	18702727	chr2:18702727:T:C	rs11096556	T	C	T	Sox2_MA0143.3	3	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr2	18763125	18763126	chr2:18763126:A:G	rs6740996	A	G	A	Sox2_MA0143.3	-13	0	+	0	0	.
chr2	18790687	18790688	chr2:18790688:T:C	rs56350710	T	C	C	Sox2_MA0143.3	4	1	+	9.206767037375712	2.2980122580604916	CCTTTGTC
chr2	18836944	18836945	chr2:18836945:C:T	rs1109635	C	T	C	Sox2_MA0143.3	21	0	+	0	0	.
chr2	19130211	19130212	chr2:19130212:T:A	rs150962866	T	A	T	Sox2_MA0143.3	27	0	+	0	0	.
chr2	19256740	19256741	chr2:19256741:A:G	rs851385	A	G	A	Sox2_MA0143.3	6	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr2	19344527	19344528	chr2:19344528:T:C	rs571268671	T	C	T	Sox2_MA0143.3	3	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr2	19367668	19367669	chr2:19367669:C:A	rs12467434	C	A	C	Sox2_MA0143.3	5	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr2	19425048	19425049	chr2:19425049:T:C	rs75247594	T	C	T	Sox2_MA0143.3	10	0	+	0	0	.
chr2	19489546	19489547	chr2:19489547:G:A	rs824446	G	A	A	Sox2_MA0143.3	19	0	-	0	0	.
chr2	19541395	19541396	chr2:19541396:T:G	chr2:19541396:T:G	T	G	T	Sox2_MA0143.3	-4	0	+	0	0	.
chr2	19580543	19580544	chr2:19580544:T:C	rs11096601	T	C	C	Sox2_MA0143.3	6	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr2	19612086	19612087	chr2:19612087:G:A	chr2:19612087:G:A	G	A	G	Sox2_MA0143.3	1	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr2	19655155	19655156	chr2:19655156:C:T	rs34585988	C	T	C	Sox2_MA0143.3	5	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr2	19901794	19901795	chr2:19901795:G:A	rs138784198	G	A	G	Sox2_MA0143.3	5	1	+	9.613475778572903	2.7047209992576837	CCATTGTT
chr2	19947681	19947682	chr2:19947682:A:G	rs74925017	A	G	A	Sox2_MA0143.3	18	0	-	0	0	.
chr2	19955772	19955773	chr2:19955773:G:A	rs13406648	G	A	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr2	19955783	19955784	chr2:19955784:A:T	rs6719397	A	T	A	Sox2_MA0143.3	-20	0	-	0	0	.
chr2	20049720	20049721	chr2:20049721:G:A	rs113054353	G	A	G	Sox2_MA0143.3	19	0	+	0	0	.
chr2	20068155	20068156	chr2:20068156:A:G	rs112271586	A	G	A	Sox2_MA0143.3	-5	0	+	0	0	.
chr2	20074451	20074452	chr2:20074452:C:G	rs72781258	C	G	C	Sox2_MA0143.3	8	0	-	0	0	.
chr2	20126657	20126658	chr2:20126658:A:T	rs3947817	A	T	A	Sox2_MA0143.3	-6	0	+	0	0	.
chr2	20144249	20144250	chr2:20144250:T:C	rs6531213	T	C	T	Sox2_MA0143.3	-6	0	+	0	0	.
chr2	20144266	20144267	chr2:20144267:T:C	rs7601441	T	C	T	Sox2_MA0143.3	11	0	+	0	0	.
chr2	20146889	20146890	chr2:20146890:G:A	rs981396	G	A	G	Sox2_MA0143.3	5	1	+	9.019595766176417	2.110840986861197	CCATTGTC
chr2	20179906	20179907	chr2:20179907:G:A	rs370740184	G	A	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr2	20179908	20179909	chr2:20179909:A:C	rs961515763	A	C	A	Sox2_MA0143.3	-8	0	-	0	0	.
chr2	20186437	20186438	chr2:20186438:G:C	rs555532148	G	C	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr2	20193288	20193289	chr2:20193289:A:G	rs74591651	A	G	A	Sox2_MA0143.3	-11	0	-	0	0	.
chr2	20351493	20351494	chr2:20351494:A:G	rs79168280	A	G	a	Sox2_MA0143.3	-7	0	-	0	0	.
chr2	20366698	20366699	chr2:20366699:T:C	rs542024349	T	C	T	Sox2_MA0143.3	23	0	+	0	0	.
chr2	20372332	20372333	chr2:20372333:T:C	rs4666383	T	C	T	Sox2_MA0143.3	21	0	-	0	0	.
chr2	20469975	20469976	chr2:20469976:A:G	rs12988451	A	G	G	Sox2_MA0143.3	-11	0	+	0	0	.
chr2	20514702	20514703	chr2:20514703:C:A	rs56021214	C	A	a	Sox2_MA0143.3	5	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr2	20555098	20555099	chr2:20555099:G:A	rs56253627	G	A	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr2	20575155	20575156	chr2:20575156:C:A	rs138382118	C	A	C	Sox2_MA0143.3	20	0	-	0	0	.
chr2	20579921	20579922	chr2:20579922:A:G	rs150972574	A	G	A	Sox2_MA0143.3	-7	0	-	0	0	.
chr2	20584461	20584462	chr2:20584462:T:C	rs374270187	T	C	T	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr2	20593497	20593498	chr2:20593498:G:A	rs78058386	G	A	G	Sox2_MA0143.3	-5	0	+	0	0	.
chr2	20601687	20601688	chr2:20601688:G:A	rs10204992	G	A	G	Sox2_MA0143.3	21	0	+	0	0	.
chr2	20644083	20644084	chr2:20644084:C:G	rs13425638	C	G	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr2	20652919	20652920	chr2:20652920:C:A	rs146043317	C	A	C	Sox2_MA0143.3	26	0	-	0	0	.
chr2	20655415	20655416	chr2:20655416:A:G	rs4666453	A	G	A	Sox2_MA0143.3	-15	0	-	0	0	.
chr2	20705284	20705285	chr2:20705285:T:C	rs1872059	T	C	C	Sox2_MA0143.3	6	1	+	9.206767037375712	2.298012258060492	CCTTTGTC
chr2	20805497	20805498	chr2:20805498:G:C	rs114254739	G	C	G	Sox2_MA0143.3	11	0	-	0	0	.
chr2	20838182	20838183	chr2:20838183:A:G	rs139338445	A	G	A	Sox2_MA0143.3	3	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr2	21108312	21108313	chr2:21108313:T:C	rs2195597	T	C	T	Sox2_MA0143.3	-14	0	+	0	0	.
chr2	21226014	21226015	chr2:21226015:C:T	rs13412147	C	T	C	Sox2_MA0143.3	13	0	-	0	0	.
chr2	21256240	21256241	chr2:21256241:T:C	rs116609675	T	C	T	Sox2_MA0143.3	6	1	+	9.613475778572903	2.7047209992576837	CCATTGTT
chr2	21260682	21260683	chr2:21260683:G:T	rs1397400	G	T	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr2	21423301	21423302	chr2:21423302:A:G	rs34073712	A	G	A	Sox2_MA0143.3	3	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr2	21716065	21716066	chr2:21716066:C:T	rs180904157	C	T	C	Sox2_MA0143.3	22	0	-	0	0	.
chr2	21716094	21716095	chr2:21716095:T:C	rs11127161	T	C	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr2	21716096	21716097	chr2:21716097:C:G	rs11676890	C	G	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr2	21943534	21943535	chr2:21943535:T:C	rs7601702	T	C	T	Sox2_MA0143.3	2	1	-	8.676919043985553	2.5582713367092715	CCATTGTG
chr2	22017828	22017829	chr2:22017829:C:T	rs373676147	C	T	C	Sox2_MA0143.3	10	0	-	0	0	.
chr2	22449765	22449766	chr2:22449766:C:T	rs116218683	C	T	C	Sox2_MA0143.3	22	0	-	0	0	.
chr2	22453214	22453215	chr2:22453215:C:T	rs17043800	C	T	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr2	22463142	22463143	chr2:22463143:G:A	rs1509374	G	A	G	Sox2_MA0143.3	17	0	-	0	0	.
chr2	22620845	22620846	chr2:22620846:T:C	rs13023128	T	C	t	Sox2_MA0143.3	-5	0	+	0	0	.
chr2	22855252	22855253	chr2:22855253:C:A	rs73919883	C	A	C	Sox2_MA0143.3	9	0	-	0	0	.
chr2	22855304	22855305	chr2:22855305:T:C	rs4665527	T	C	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr2	22890541	22890542	chr2:22890542:T:G	chr2:22890542:T:G	T	G	T	Sox2_MA0143.3	24	0	-	0	0	.
chr2	22912593	22912594	chr2:22912594:A:G	rs2339703	A	G	G	Sox2_MA0143.3	2	1	-	9.800647049772198	3.494828071296623	CCTTTGTT
chr2	23107589	23107590	chr2:23107590:A:G	rs76376087	A	G	A	Sox2_MA0143.3	15	0	-	0	0	.
chr2	23107593	23107594	chr2:23107594:G:C	rs78749130	G	C	G	Sox2_MA0143.3	11	0	-	0	0	.
chr2	23213446	23213447	chr2:23213447:G:C	rs77828008	G	C	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr2	23220528	23220529	chr2:23220529:C:A	rs56123404	C	A	C	Sox2_MA0143.3	11	0	+	0	0	.
chr2	23238715	23238716	chr2:23238716:C:T	rs34400623	C	T	C	Sox2_MA0143.3	5	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr2	23419958	23419959	chr2:23419959:T:C	rs78482199	T	C	T	Sox2_MA0143.3	23	0	-	0	0	.
chr2	23421209	23421210	chr2:23421210:T:G	rs62126851	T	G	T	Sox2_MA0143.3	17	0	-	0	0	.
chr2	23488030	23488031	chr2:23488031:A:T	rs10206465	A	T	A	Sox2_MA0143.3	18	0	-	0	0	.
chr2	23502207	23502208	chr2:23502208:A:G	rs72848083	A	G	A	Sox2_MA0143.3	-16	0	-	0	0	.
chr2	23545699	23545700	chr2:23545700:G:A	rs113810923	G	A	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr2	23563639	23563640	chr2:23563640:A:G	rs968850711	A	G	A	Sox2_MA0143.3	-12	0	+	0	0	.
chr2	23563740	23563741	chr2:23563741:T:C	rs12478906	T	C	C	Sox2_MA0143.3	10	0	-	0	0	.
chr2	23563769	23563770	chr2:23563770:C:T	rs141437395	C	T	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr2	23563770	23563771	chr2:23563771:G:A	rs73919759	G	A	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr2	23753453	23753454	chr2:23753454:G:A	rs718138	G	A	A	Sox2_MA0143.3	0	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr2	23757827	23757828	chr2:23757828:T:C	rs116791512	T	C	t	Sox2_MA0143.3	3	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr2	23912163	23912164	chr2:23912164:A:G	rs12616257	A	G	G	Sox2_MA0143.3	8	0	-	0	0	.
chr2	23939832	23939833	chr2:23939833:G:A	rs115721531	G	A	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr2	23988679	23988680	chr2:23988680:T:C	rs12616250	T	C	T	Sox2_MA0143.3	6	1	+	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr2	24012952	24012953	chr2:24012953:G:A	rs369086609	G	A	G	Sox2_MA0143.3	10	0	-	0	0	.
chr2	24015828	24015829	chr2:24015829:C:T	rs111478522	C	T	-	Sox2_MA0143.3	-4	0	+	0	0	.
chr2	24027152	24027153	chr2:24027153:G:A	rs4665652	G	A	G	Sox2_MA0143.3	1	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr2	24050729	24050730	chr2:24050730:T:C	rs3769668	T	C	T	Sox2_MA0143.3	6	1	+	9.019595766176417	2.110840986861197	CCATTGTC
chr2	24253519	24253520	chr2:24253520:T:C	rs148869366	T	C	T	Sox2_MA0143.3	4	1	+	9.206767037375712	2.2980122580604916	CCTTTGTC
chr2	24400363	24400364	chr2:24400364:C:T	rs76728956	C	T	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr2	24766788	24766789	chr2:24766789:G:A	rs143137414	G	A	G	Sox2_MA0143.3	16	0	-	0	0	.
chr2	24832198	24832199	chr2:24832199:C:T	rs755640426	C	T	C	Sox2_MA0143.3	-12	0	-	0	0	.
chr2	24848917	24848918	chr2:24848918:G:C	rs79990615	G	C	G	Sox2_MA0143.3	1	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr2	24886934	24886935	chr2:24886935:C:T	rs9631061	C	T	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr2	24913996	24913997	chr2:24913997:T:A	rs10203386	T	A	t	Sox2_MA0143.3	4	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr2	24921457	24921458	chr2:24921458:A:G	rs77816629	A	G	A	Sox2_MA0143.3	2	1	+	9.613475778572903	3.494828071296623	CCATTGTT
chr2	24970038	24970039	chr2:24970039:C:A	rs56784950	C	A	A	Sox2_MA0143.3	-3	0	+	0	0	.
chr2	24993427	24993428	chr2:24993428:C:G	rs1561447	C	G	C	Sox2_MA0143.3	-20	0	-	0	0	.
chr2	25031865	25031866	chr2:25031866:T:G	rs6734834	T	G	T	Sox2_MA0143.3	26	0	+	0	0	.
chr2	25210193	25210194	chr2:25210194:C:T	rs549275390	C	T	C	Sox2_MA0143.3	12	0	+	0	0	.
chr2	25365147	25365148	chr2:25365148:C:A	rs35210809	C	A	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr2	25372324	25372325	chr2:25372325:T:C	rs1010658	T	C	C	Sox2_MA0143.3	2	1	-	9.613475778572903	3.494828071296623	CCATTGTT
chr2	25372334	25372335	chr2:25372335:G:T	rs143670184	G	T	G	Sox2_MA0143.3	0	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr2	25400720	25400721	chr2:25400721:T:C	rs1369704	T	C	T	Sox2_MA0143.3	22	0	-	0	0	.
chr2	25492396	25492397	chr2:25492397:T:C	rs59653785	T	C	T	Sox2_MA0143.3	10	0	-	0	0	.
chr2	25672698	25672699	chr2:25672699:A:C	rs563751107	A	C	A	Sox2_MA0143.3	26	0	+	0	0	.
chr2	25954607	25954608	chr2:25954608:T:C	rs80353079	T	C	C	Sox2_MA0143.3	6	1	+	9.019595766176417	2.110840986861197	CCATTGTC
chr2	26009222	26009223	chr2:26009223:C:T	rs368171084	C	T	C	Sox2_MA0143.3	5	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr2	26044076	26044077	chr2:26044077:A:G	rs1550381	A	G	a	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr2	26071008	26071009	chr2:26071009:T:C	rs6546736	T	C	T	Sox2_MA0143.3	2	1	-	9.019595766176417	2.900948058900136	CCATTGTC
chr2	26324932	26324933	chr2:26324933:C:T	rs56146105	C	T	C	Sox2_MA0143.3	-20	0	-	0	0	.
chr2	26453885	26453886	chr2:26453886:C:T	rs11684070	C	T	C	Sox2_MA0143.3	24	0	+	0	0	.
chr2	26455627	26455628	chr2:26455628:C:A	rs11126491	C	A	A	Sox2_MA0143.3	5	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr2	26455647	26455648	chr2:26455648:C:G	rs149544609	C	G	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr2	26497731	26497732	chr2:26497732:A:C	rs6547064	A	C	C	Sox2_MA0143.3	6	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr2	26497741	26497742	chr2:26497742:G:A	rs6547065	G	A	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr2	26517755	26517756	chr2:26517756:T:C	rs4665332	T	C	T	Sox2_MA0143.3	2	1	-	9.613475778572903	3.494828071296623	CCATTGTT
chr2	26616895	26616896	chr2:26616896:G:A	rs10201737	G	A	G	Sox2_MA0143.3	24	0	-	0	0	.
chr2	26642777	26642778	chr2:26642778:C:A	rs1275928	C	A	C	Sox2_MA0143.3	21	0	+	0	0	.
chr2	26663654	26663655	chr2:26663655:G:A	rs1731227	G	A	g	Sox2_MA0143.3	-14	0	+	0	0	.
chr2	26698994	26698995	chr2:26698995:T:A	rs115939675	T	A	T	Sox2_MA0143.3	2	1	-	9.613475778572903	9.800647049772198	CCATTGTT
chr2	26720768	26720769	chr2:26720769:G:A	rs78637252	G	A	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr2	26724224	26724225	chr2:26724225:T:C	rs35486562	T	C	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr2	26826849	26826850	chr2:26826850:C:T	rs12995609	C	T	C	Sox2_MA0143.3	8	0	+	0	0	.
chr2	26985998	26985999	chr2:26985999:T:A	rs1866655	T	A	T	Sox2_MA0143.3	7	1	+	9.800647049772198	3.5547341015215945	CCTTTGTT
chr2	27071170	27071171	chr2:27071171:C:T	rs1401239422	C	T	C	Sox2_MA0143.3	27	0	-	0	0	.
chr2	27071205	27071206	chr2:27071206:T:C	rs78936443	T	C	T	Sox2_MA0143.3	-8	0	-	0	0	.
chr2	27134977	27134978	chr2:27134978:C:A	rs185416041	C	A	C	Sox2_MA0143.3	5	1	-	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr2	27171641	27171642	chr2:27171642:T:C	rs143740473	T	C	T	Sox2_MA0143.3	-5	0	+	0	0	.
chr2	27238099	27238100	chr2:27238100:A:G	rs1141313	A	G	G	Sox2_MA0143.3	16	0	+	0	0	.
chr2	27387008	27387009	chr2:27387009:G:A	rs184559318	G	A	G	Sox2_MA0143.3	8	0	-	0	0	.
chr2	27508072	27508073	chr2:27508073:T:C	rs1260326	T	C	C	Sox2_MA0143.3	25	0	-	0	0	.
chr2	27543609	27543610	chr2:27543610:C:T	rs115134309	C	T	C	Sox2_MA0143.3	21	0	+	0	0	.
chr2	27628252	27628253	chr2:27628253:T:C	rs12615690	T	C	c	Sox2_MA0143.3	13	0	-	0	0	.
chr2	27729538	27729539	chr2:27729539:C:T	rs12994085	C	T	C	Sox2_MA0143.3	23	0	-	0	0	.
chr2	28096266	28096267	chr2:28096267:A:G	rs3863	A	G	A	Sox2_MA0143.3	10	0	+	0	0	.
chr2	28160819	28160820	chr2:28160820:T:G	rs56104185	T	G	T	Sox2_MA0143.3	18	0	-	0	0	.
chr2	28181994	28181995	chr2:28181995:A:G	rs74943580	A	G	A	Sox2_MA0143.3	3	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr2	28201604	28201605	chr2:28201605:C:T	rs17709034	C	T	C	Sox2_MA0143.3	23	0	+	0	0	.
chr2	28254427	28254428	chr2:28254428:C:T	rs11127141	C	T	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr2	28276456	28276457	chr2:28276457:G:A	rs76683099	G	A	G	Sox2_MA0143.3	10	0	+	0	0	.
chr2	28276457	28276458	chr2:28276458:C:T	rs114574084	C	T	C	Sox2_MA0143.3	11	0	+	0	0	.
chr2	28312193	28312194	chr2:28312194:A:G	rs4666053	A	G	A	Sox2_MA0143.3	2	1	+	8.676919043985553	2.5582713367092715	CCATTGTG
chr2	28359521	28359522	chr2:28359522:A:G	rs138909462	A	G	A	Sox2_MA0143.3	19	0	+	0	0	.
chr2	28403584	28403585	chr2:28403585:C:A	rs762888689	C	A	C	Sox2_MA0143.3	21	0	-	0	0	.
chr2	28488888	28488889	chr2:28488889:C:T	rs76871738	C	T	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr2	28488898	28488899	chr2:28488899:T:C	rs11680308	T	C	T	Sox2_MA0143.3	6	1	+	8.676919043985553	1.7681642646703326	CCATTGTG
chr2	28511548	28511549	chr2:28511549:T:A	rs34821748	T	A	a	Sox2_MA0143.3	12	0	+	0	0	.
chr2	28543386	28543387	chr2:28543387:T:C	rs11127164	T	C	T	Sox2_MA0143.3	-4	0	-	0	0	.
chr2	28557378	28557379	chr2:28557379:A:G	rs114868246	A	G	A	Sox2_MA0143.3	2	1	+	8.676919043985553	2.5582713367092715	CCATTGTG
chr2	28570481	28570482	chr2:28570482:A:C	rs1609257	A	C	C	Sox2_MA0143.3	23	0	-	0	0	.
chr2	28570489	28570490	chr2:28570490:A:G	rs2338442	A	G	A	Sox2_MA0143.3	15	0	-	0	0	.
chr2	28573510	28573511	chr2:28573511:A:G	rs13409024	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr2	28586686	28586687	chr2:28586687:T:C	rs72791696	T	C	T	Sox2_MA0143.3	13	0	+	0	0	.
chr2	28622623	28622624	chr2:28622624:C:G	rs11127180	C	G	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr2	28624938	28624939	chr2:28624939:C:G	rs11127181	C	G	G	Sox2_MA0143.3	0	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr2	28630203	28630204	chr2:28630204:T:C	rs4641898	T	C	C	Sox2_MA0143.3	4	1	+	8.676919043985553	1.7681642646703322	CCATTGTG
chr2	28633328	28633329	chr2:28633329:A:G	rs3752900	A	G	G	Sox2_MA0143.3	24	0	+	0	0	.
chr2	28644732	28644733	chr2:28644733:T:C	rs55860656	T	C	T	Sox2_MA0143.3	-13	0	-	0	0	.
chr2	28671600	28671601	chr2:28671601:G:A	rs4666113	G	A	A	Sox2_MA0143.3	-16	0	+	0	0	.
chr2	28682943	28682944	chr2:28682944:C:T	rs17007170	C	T	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr2	28803414	28803415	chr2:28803415:T:C	rs138970777	T	C	T	Sox2_MA0143.3	20	0	-	0	0	.
chr2	28928168	28928169	chr2:28928169:C:T	rs11677283	C	T	C	Sox2_MA0143.3	12	0	+	0	0	.
chr2	29015564	29015565	chr2:29015565:C:T	rs891891859	C	T	T	Sox2_MA0143.3	-16	0	+	0	0	.
chr2	29020047	29020048	chr2:29020048:T:G	rs73922944	T	G	T	Sox2_MA0143.3	-11	0	-	0	0	.
chr2	29062219	29062220	chr2:29062220:G:A	rs74992908	G	A	G	Sox2_MA0143.3	0	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr2	29075505	29075506	chr2:29075506:C:T	rs7583117	C	T	T	Sox2_MA0143.3	-9	0	+	0	0	.
chr2	29283508	29283509	chr2:29283509:C:T	rs10208218	C	T	T	Sox2_MA0143.3	-1	0	-	0	0	.
chr2	29291084	29291085	chr2:29291085:A:T	rs10197126	A	T	A	Sox2_MA0143.3	-10	0	-	0	0	.
chr2	29373900	29373901	chr2:29373901:G:C	rs17008005	G	C	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr2	29398762	29398763	chr2:29398763:A:G	rs10204724	A	G	A	Sox2_MA0143.3	-6	0	-	0	0	.
chr2	29448010	29448011	chr2:29448011:T:C	rs4497832	T	C	T	Sox2_MA0143.3	-10	0	-	0	0	.
chr2	29527818	29527819	chr2:29527819:C:A	rs55869806	C	A	C	Sox2_MA0143.3	19	0	+	0	0	.
chr2	29595405	29595406	chr2:29595406:T:C	rs6547959	T	C	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr2	29611799	29611800	chr2:29611800:T:C	rs139723898	T	C	T	Sox2_MA0143.3	-4	0	+	0	0	.
chr2	29621445	29621446	chr2:29621446:C:T	rs72862862	C	T	C	Sox2_MA0143.3	19	0	+	0	0	.
chr2	29719832	29719833	chr2:29719833:A:G	rs2541199	A	G	G	Sox2_MA0143.3	8	0	-	0	0	.
chr2	29804638	29804639	chr2:29804639:A:C	rs4666276	A	C	A	Sox2_MA0143.3	20	0	+	0	0	.
chr2	29871970	29871971	chr2:29871971:C:A	rs75758876	C	A	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr2	29895344	29895345	chr2:29895345:G:A	rs5018731	G	A	G	Sox2_MA0143.3	24	0	-	0	0	.
chr2	29896278	29896279	chr2:29896279:T:C	rs6725447	T	C	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr2	29908451	29908452	chr2:29908452:G:A	rs115417380	G	A	G	Sox2_MA0143.3	21	0	+	0	0	.
chr2	30097730	30097731	chr2:30097731:C:T	rs4952097	C	T	T	Sox2_MA0143.3	22	0	+	0	0	.
chr2	30234775	30234776	chr2:30234776:C:T	rs75731730	C	T	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr2	30249401	30249402	chr2:30249402:G:A	rs872260	G	A	G	Sox2_MA0143.3	23	0	+	0	0	.
chr2	30250399	30250400	chr2:30250400:A:G	rs34097147	A	G	A	Sox2_MA0143.3	26	0	+	0	0	.
chr2	30263499	30263500	chr2:30263500:A:T	rs77627525	A	T	A	Sox2_MA0143.3	-7	0	+	0	0	.
chr2	30264331	30264332	chr2:30264332:A:G	rs9309678	A	G	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr2	30290780	30290781	chr2:30290781:T:C	rs73925116	T	C	T	Sox2_MA0143.3	9	0	-	0	0	.
chr2	30334882	30334883	chr2:30334883:A:G	rs7604316	A	G	G	Sox2_MA0143.3	2	1	+	8.676919043985553	2.5582713367092715	CCATTGTG
chr2	30372898	30372899	chr2:30372899:A:G	rs12988612	A	G	A	Sox2_MA0143.3	2	1	+	9.613475778572903	3.494828071296623	CCATTGTT
chr2	30383064	30383065	chr2:30383065:G:A	rs188280899	G	A	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr2	30500031	30500032	chr2:30500032:A:G	rs75547092	A	G	A	Sox2_MA0143.3	-16	0	+	0	0	.
chr2	30507894	30507895	chr2:30507895:T:A	rs113874134	T	A	T	Sox2_MA0143.3	-10	0	-	0	0	.
chr2	30516469	30516470	chr2:30516470:C:T	rs10180872	C	T	c	Sox2_MA0143.3	14	0	+	0	0	.
chr2	30518325	30518326	chr2:30518326:T:C	rs1252644	T	C	T	Sox2_MA0143.3	21	0	-	0	0	.
chr2	30583432	30583433	chr2:30583433:C:T	rs13388031	C	T	C	Sox2_MA0143.3	19	0	+	0	0	.
chr2	30609020	30609021	chr2:30609021:A:G	rs4952162	A	G	A	Sox2_MA0143.3	24	0	-	0	0	.
chr2	30649197	30649198	chr2:30649198:T:G	rs7583600	T	G	T	Sox2_MA0143.3	23	0	-	0	0	.
chr2	30665419	30665420	chr2:30665420:C:T	rs4952172	C	T	C	Sox2_MA0143.3	23	0	+	0	0	.
chr2	30701914	30701915	chr2:30701915:G:C	rs562282593	G	C	G	Sox2_MA0143.3	-9	0	+	0	0	.
chr2	30701983	30701984	chr2:30701984:G:T	rs2609942	G	T	T	Sox2_MA0143.3	8	0	+	0	0	.
chr2	30702769	30702770	chr2:30702770:G:A	chr2:30702770:G:A	G	A	G	Sox2_MA0143.3	-2	0	+	0	0	.
chr2	30736695	30736696	chr2:30736696:G:T	rs72867120	G	T	G	Sox2_MA0143.3	16	0	+	0	0	.
chr2	30746185	30746186	chr2:30746186:T:G	rs181641239	T	G	T	Sox2_MA0143.3	20	0	-	0	0	.
chr2	30761423	30761424	chr2:30761424:C:G	rs11679542	C	G	C	Sox2_MA0143.3	0	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr2	30763778	30763779	chr2:30763779:C:T	rs17324662	C	T	C	Sox2_MA0143.3	-12	0	-	0	0	.
chr2	30798660	30798661	chr2:30798661:T:G	chr2:30798661:T:G	T	G	T	Sox2_MA0143.3	17	0	-	0	0	.
chr2	30881084	30881085	chr2:30881085:G:C	rs10197968	G	C	G	Sox2_MA0143.3	5	1	+	9.206767037375712	2.298012258060492	CCTTTGTC
chr2	30881105	30881106	chr2:30881106:C:T	rs78172345	C	T	C	Sox2_MA0143.3	26	0	+	0	0	.
chr2	30914512	30914513	chr2:30914513:G:C	rs114306677	G	C	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr2	30979755	30979756	chr2:30979756:G:C	rs77662495	G	C	G	Sox2_MA0143.3	20	0	+	0	0	.
chr2	31162107	31162108	chr2:31162108:T:C	rs17010778	T	C	T	Sox2_MA0143.3	4	1	+	8.676919043985553	1.7681642646703322	CCATTGTG
chr2	31163390	31163391	chr2:31163391:C:T	rs550362687	C	T	C	Sox2_MA0143.3	24	0	+	0	0	.
chr2	31187561	31187562	chr2:31187562:C:T	rs56373046	C	T	C	Sox2_MA0143.3	14	0	-	0	0	.
chr2	31199029	31199030	chr2:31199030:A:G	rs11894727	A	G	A	Sox2_MA0143.3	-3	0	+	0	0	.
chr2	31199847	31199848	chr2:31199848:T:C	rs17010998	T	C	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr2	31199867	31199868	chr2:31199868:G:T	rs17010999	G	T	T	Sox2_MA0143.3	12	0	+	0	0	.
chr2	31214805	31214806	chr2:31214806:C:T	rs80256378	C	T	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr2	31231678	31231679	chr2:31231679:C:T	rs605832	C	T	T	Sox2_MA0143.3	-7	0	-	0	0	.
chr2	31286132	31286133	chr2:31286133:G:A	rs77781418	G	A	G	Sox2_MA0143.3	14	0	-	0	0	.
chr2	31287306	31287307	chr2:31287307:A:G	rs4951977	A	G	G	Sox2_MA0143.3	3	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr2	31324371	31324372	chr2:31324372:G:A	rs207424	G	A	A	Sox2_MA0143.3	25	0	-	0	0	.
chr2	31327313	31327314	chr2:31327314:G:A	rs12478111	G	A	G	Sox2_MA0143.3	17	0	-	0	0	.
chr2	31327761	31327762	chr2:31327762:A:G	rs207428	A	G	A	Sox2_MA0143.3	22	0	-	0	0	.
chr2	31329167	31329168	chr2:31329168:C:A	rs10164462	C	A	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr2	31347202	31347203	chr2:31347203:A:G	rs1366811	A	G	A	Sox2_MA0143.3	-15	0	+	0	0	.
chr2	31355006	31355007	chr2:31355007:A:G	rs56166245	A	G	A	Sox2_MA0143.3	10	0	-	0	0	.
chr2	31355013	31355014	chr2:31355014:A:C	rs10174527	A	C	A	Sox2_MA0143.3	3	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr2	31360589	31360590	chr2:31360590:T:A	rs57418374	T	A	A	Sox2_MA0143.3	-3	0	+	0	0	.
chr2	31375618	31375619	chr2:31375619:T:C	rs2070294	T	C	T	Sox2_MA0143.3	14	0	+	0	0	.
chr2	31474814	31474815	chr2:31474815:T:C	rs58967340	T	C	T	Sox2_MA0143.3	-20	0	-	0	0	.
chr2	31521896	31521897	chr2:31521897:G:C	rs12997020	G	C	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr2	31654349	31654350	chr2:31654350:C:G	rs72794663	C	G	C	Sox2_MA0143.3	17	0	-	0	0	.
chr2	31875989	31875990	chr2:31875990:T:C	rs1272585	T	C	T	Sox2_MA0143.3	3	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr2	32011562	32011563	chr2:32011563:T:C	rs147967147	T	C	T	Sox2_MA0143.3	9	0	+	0	0	.
chr2	32278190	32278191	chr2:32278191:C:G	rs564046880	C	G	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr2	32580984	32580985	chr2:32580985:C:G	rs62136344	C	G	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr2	32628583	32628584	chr2:32628584:A:G	rs113547951	A	G	A	Sox2_MA0143.3	12	0	-	0	0	.
chr2	32628588	32628589	chr2:32628589:G:A	rs6711579	G	A	A	Sox2_MA0143.3	7	1	-	9.019595766176417	9.613475778572903	CCATTGTC
chr2	32761367	32761368	chr2:32761368:T:C	rs55782356	T	C	T	Sox2_MA0143.3	25	0	+	0	0	.
chr2	32849045	32849046	chr2:32849046:T:C	rs72789809	T	C	T	Sox2_MA0143.3	6	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr2	32925864	32925865	chr2:32925865:A:G	rs897509	A	G	A	Sox2_MA0143.3	23	0	-	0	0	.
chr2	33039008	33039009	chr2:33039009:C:G	rs17396752	C	G	C	Sox2_MA0143.3	16	0	+	0	0	.
chr2	33059542	33059543	chr2:33059543:T:C	rs17324902	T	C	T	Sox2_MA0143.3	16	0	-	0	0	.
chr2	33059553	33059554	chr2:33059554:C:T	rs75707909	C	T	C	Sox2_MA0143.3	5	1	-	9.613475778572903	2.7047209992576837	CCATTGTT
chr2	33287515	33287516	chr2:33287516:G:T	rs11124313	G	T	G	Sox2_MA0143.3	0	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr2	33297110	33297111	chr2:33297111:G:T	rs17038524	G	T	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr2	33657675	33657676	chr2:33657676:A:T	chr2:33657676:A:T	A	T	a	Sox2_MA0143.3	2	1	+	9.613475778572903	9.800647049772198	CCATTGTT
chr2	33749305	33749306	chr2:33749306:C:G	rs6745119	C	G	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr2	33788398	33788399	chr2:33788399:T:C	rs78540501	T	C	T	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr2	33918999	33919000	chr2:33919000:A:G	rs13400706	A	G	G	Sox2_MA0143.3	4	1	-	8.676919043985553	1.7681642646703322	CCATTGTG
chr2	33953607	33953608	chr2:33953608:G:C	rs7607204	G	C	G	Sox2_MA0143.3	5	1	+	9.019595766176417	2.110840986861197	CCATTGTC
chr2	33958688	33958689	chr2:33958689:T:G	rs13421785	T	G	G	Sox2_MA0143.3	8	0	-	0	0	.
chr2	34191727	34191728	chr2:34191728:C:T	rs17014846	C	T	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr2	34217285	34217286	chr2:34217286:C:A	rs945067116	C	A	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr2	34230044	34230045	chr2:34230045:T:A	rs7595827	T	A	A	Sox2_MA0143.3	-17	0	+	0	0	.
chr2	34363236	34363237	chr2:34363237:T:C	rs1347302	T	C	C	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr2	34364931	34364932	chr2:34364932:C:T	rs10495818	C	T	C	Sox2_MA0143.3	21	0	-	0	0	.
chr2	34474932	34474933	chr2:34474933:T:C	rs7608523	T	C	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr2	34567301	34567302	chr2:34567302:C:G	rs72790811	C	G	C	Sox2_MA0143.3	1	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr2	34747849	34747850	chr2:34747850:G:A	rs3108092	G	A	G	Sox2_MA0143.3	1	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr2	34868225	34868226	chr2:34868226:T:G	rs7600259	T	G	T	Sox2_MA0143.3	9	0	+	0	0	.
chr2	34972514	34972515	chr2:34972515:G:C	rs61220543	G	C	G	Sox2_MA0143.3	5	1	+	9.613475778572903	2.7047209992576837	CCATTGTT
chr2	35112876	35112877	chr2:35112877:C:T	rs185291943	C	T	C	Sox2_MA0143.3	15	0	+	0	0	.
chr2	35329477	35329478	chr2:35329478:A:G	rs192351680	A	G	A	Sox2_MA0143.3	21	0	-	0	0	.
chr2	35415406	35415407	chr2:35415407:A:G	rs66955879	A	G	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr2	35428691	35428692	chr2:35428692:G:T	rs72789743	G	T	G	Sox2_MA0143.3	16	0	-	0	0	.
chr2	35468652	35468653	chr2:35468653:C:T	rs2719096	C	T	T	Sox2_MA0143.3	-5	0	-	0	0	.
chr2	35575363	35575364	chr2:35575364:G:A	rs114681710	G	A	G	Sox2_MA0143.3	14	0	-	0	0	.
chr2	35819134	35819135	chr2:35819135:C:T	rs62149099	C	T	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr2	35864358	35864359	chr2:35864359:C:G	rs11899449	C	G	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr2	35871149	35871150	chr2:35871150:T:G	rs13388598	T	G	G	Sox2_MA0143.3	-5	0	+	0	0	.
chr2	35871795	35871796	chr2:35871796:A:C	rs148532417	A	C	A	Sox2_MA0143.3	21	0	+	0	0	.
chr2	35906498	35906499	chr2:35906499:A:G	rs2968592	A	G	A	Sox2_MA0143.3	6	1	-	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr2	36333827	36333828	chr2:36333828:A:G	rs78851440	A	G	A	Sox2_MA0143.3	11	0	+	0	0	.
chr2	36389029	36389030	chr2:36389030:C:T	rs3770943	C	T	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr2	36389032	36389033	chr2:36389033:T:C	rs3770942	T	C	T	Sox2_MA0143.3	-7	0	+	0	0	.
chr2	36412335	36412336	chr2:36412336:A:G	rs79277126	A	G	A	Sox2_MA0143.3	-16	0	-	0	0	.
chr2	36422868	36422869	chr2:36422869:T:C	rs3770901	T	C	T	Sox2_MA0143.3	6	1	+	9.019595766176417	2.110840986861197	CCATTGTC
chr2	36437754	36437755	chr2:36437755:A:T	rs17018790	A	T	A	Sox2_MA0143.3	-10	0	-	0	0	.
chr2	36456564	36456565	chr2:36456565:G:A	rs1017154	G	A	A	Sox2_MA0143.3	-13	0	+	0	0	.
chr2	36673742	36673743	chr2:36673743:G:C	rs17019437	G	C	G	Sox2_MA0143.3	10	0	-	0	0	.
chr2	36676622	36676623	chr2:36676623:A:G	rs2192889	A	G	A	Sox2_MA0143.3	16	0	+	0	0	.
chr2	36807869	36807870	chr2:36807870:A:G	rs4670171	A	G	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr2	36859260	36859261	chr2:36859261:T:C	rs79936484	T	C	t	Sox2_MA0143.3	11	0	-	0	0	.
chr2	36859276	36859277	chr2:36859277:A:G	rs2691121	A	G	g	Sox2_MA0143.3	-5	0	-	0	0	.
chr2	36941905	36941906	chr2:36941906:G:A	rs10193295	G	A	A	Sox2_MA0143.3	-20	0	+	0	0	.
chr2	37134768	37134769	chr2:37134769:G:A	rs147982105	G	A	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr2	37191476	37191477	chr2:37191477:T:G	rs72792809	T	G	T	Sox2_MA0143.3	-1	0	+	0	0	.
chr2	37191477	37191478	chr2:37191478:C:T	rs72792810	C	T	C	Sox2_MA0143.3	0	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr2	37301334	37301335	chr2:37301335:C:T	rs6730503	C	T	T	Sox2_MA0143.3	21	0	-	0	0	.
chr2	37377625	37377626	chr2:37377626:G:A	rs4233922	G	A	A	Sox2_MA0143.3	13	0	-	0	0	.
chr2	37381029	37381030	chr2:37381030:A:G	rs12470795	A	G	a	Sox2_MA0143.3	-19	0	+	0	0	.
chr2	37524328	37524329	chr2:37524329:C:G	rs115367456	C	G	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr2	37587683	37587684	chr2:37587684:T:G	rs10490284	T	G	T	Sox2_MA0143.3	6	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr2	37671839	37671840	chr2:37671840:A:C	rs575253023	A	C	A	Sox2_MA0143.3	17	0	-	0	0	.
chr2	37671884	37671885	chr2:37671885:C:T	rs977768321	C	T	C	Sox2_MA0143.3	23	0	+	0	0	.
chr2	37713486	37713487	chr2:37713487:C:G	rs28876725	C	G	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr2	37713770	37713771	chr2:37713771:T:C	rs13398089	T	C	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr2	37713795	37713796	chr2:37713796:A:G	rs13410102	A	G	A	Sox2_MA0143.3	22	0	+	0	0	.
chr2	37740585	37740586	chr2:37740586:G:A	rs61498998	G	A	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr2	37768674	37768675	chr2:37768675:A:G	rs147651035	A	G	A	Sox2_MA0143.3	27	0	-	0	0	.
chr2	37832978	37832979	chr2:37832979:T:C	rs72876566	T	C	T	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr2	37843632	37843633	chr2:37843633:T:C	rs2565619	T	C	T	Sox2_MA0143.3	12	0	-	0	0	.
chr2	37843633	37843634	chr2:37843634:A:G	rs2565620	A	G	A	Sox2_MA0143.3	11	0	-	0	0	.
chr2	37909604	37909605	chr2:37909605:T:A	rs1430029	T	A	A	Sox2_MA0143.3	-14	0	-	0	0	.
chr2	37930880	37930881	chr2:37930881:G:A	rs181627727	G	A	G	Sox2_MA0143.3	19	0	-	0	0	.
chr2	38039852	38039853	chr2:38039853:G:T	rs336030	G	T	G	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr2	38076698	38076699	chr2:38076699:C:T	rs750033373	C	T	C	Sox2_MA0143.3	26	0	-	0	0	.
chr2	38078308	38078309	chr2:38078309:A:G	rs162557	A	G	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr2	38109079	38109080	chr2:38109080:G:A	rs11886662	G	A	G	Sox2_MA0143.3	5	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr2	38131053	38131054	chr2:38131054:A:T	rs149778960	A	T	A	Sox2_MA0143.3	-4	0	-	0	0	.
chr2	38218636	38218637	chr2:38218637:C:A	rs10183112	C	A	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr2	38222866	38222867	chr2:38222867:A:G	rs4670244	A	G	G	Sox2_MA0143.3	11	0	-	0	0	.
chr2	38417736	38417737	chr2:38417737:A:T	rs77299092	A	T	A	Sox2_MA0143.3	-2	0	+	0	0	.
chr2	38751446	38751447	chr2:38751447:G:A	rs551693239	G	A	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr2	38752002	38752003	chr2:38752003:G:C	rs187599888	G	C	G	Sox2_MA0143.3	11	0	-	0	0	.
chr2	38922917	38922918	chr2:38922918:T:G	rs6738069	T	G	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr2	38981800	38981801	chr2:38981801:A:G	rs1043800	A	G	A	Sox2_MA0143.3	6	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr2	39121276	39121277	chr2:39121277:C:T	rs757185531	C	T	C	Sox2_MA0143.3	0	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr2	39161337	39161338	chr2:39161338:C:T	rs61141933	C	T	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr2	39229809	39229810	chr2:39229810:T:A	rs143804403	T	A	T	Sox2_MA0143.3	-8	0	-	0	0	.
chr2	39266143	39266144	chr2:39266144:A:C	rs3770670	A	C	C	Sox2_MA0143.3	25	0	+	0	0	.
chr2	39302994	39302995	chr2:39302995:C:T	rs3770664	C	T	T	Sox2_MA0143.3	-17	0	-	0	0	.
chr2	39435339	39435340	chr2:39435340:T:C	rs73924016	T	C	T	Sox2_MA0143.3	27	0	+	0	0	.
chr2	39468060	39468061	chr2:39468061:G:A	rs140891783	G	A	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr2	39516734	39516735	chr2:39516735:T:C	rs734663	T	C	T	Sox2_MA0143.3	16	0	+	0	0	.
chr2	39522169	39522170	chr2:39522170:C:T	rs6741839	C	T	C	Sox2_MA0143.3	23	0	+	0	0	.
chr2	39582190	39582191	chr2:39582191:A:G	rs780354759	A	G	A	Sox2_MA0143.3	-20	0	-	0	0	.
chr2	39625482	39625483	chr2:39625483:A:G	rs12472275	A	G	G	Sox2_MA0143.3	23	0	+	0	0	.
chr2	39642584	39642585	chr2:39642585:C:T	rs760540782	C	T	C	Sox2_MA0143.3	10	0	-	0	0	.
chr2	39665232	39665233	chr2:39665233:A:C	rs12989245	A	C	A	Sox2_MA0143.3	-10	0	-	0	0	.
chr2	39665236	39665237	chr2:39665237:C:G	rs12712652	C	G	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr2	39696258	39696259	chr2:39696259:G:T	chr2:39696259:G:T	G	T	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr2	39696936	39696937	chr2:39696937:C:A	rs191157810	C	A	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr2	39696939	39696940	chr2:39696940:C:A	rs564044452	C	A	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr2	39851474	39851475	chr2:39851475:T:C	rs115751124	T	C	t	Sox2_MA0143.3	-20	0	+	0	0	.
chr2	39923243	39923244	chr2:39923244:T:A	rs771862592	T	A	T	Sox2_MA0143.3	24	0	-	0	0	.
chr2	39939455	39939456	chr2:39939456:T:C	rs737589	T	C	T	Sox2_MA0143.3	-15	0	+	0	0	.
chr2	39982069	39982070	chr2:39982070:C:T	rs77463248	C	T	C	Sox2_MA0143.3	17	0	-	0	0	.
chr2	39996959	39996960	chr2:39996960:A:T	rs183306218	A	T	A	Sox2_MA0143.3	-12	0	+	0	0	.
chr2	40033144	40033145	chr2:40033145:C:G	rs73924733	C	G	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr2	40100751	40100752	chr2:40100752:C:G	rs10183831	C	G	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr2	40159973	40159974	chr2:40159974:C:G	rs445972	C	G	C	Sox2_MA0143.3	12	0	+	0	0	.
chr2	40168151	40168152	chr2:40168152:A:C	rs379556	A	C	A	Sox2_MA0143.3	10	0	-	0	0	.
chr2	40242538	40242539	chr2:40242539:C:A	rs443236	C	A	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr2	40242564	40242565	chr2:40242565:G:C	rs371909	G	C	T	Sox2_MA0143.3	18	0	+	0	0	.
chr2	40283400	40283401	chr2:40283401:C:T	rs114589275	C	T	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr2	40304572	40304573	chr2:40304573:T:C	rs116135671	T	C	T	Sox2_MA0143.3	-14	0	+	0	0	.
chr2	40353777	40353778	chr2:40353778:A:C	rs11690171	A	C	A	Sox2_MA0143.3	10	0	-	0	0	.
chr2	40363713	40363714	chr2:40363714:T:G	chr2:40363714:T:G	T	G	T	Sox2_MA0143.3	13	0	+	0	0	.
chr2	40400571	40400572	chr2:40400572:A:G	rs6544336	A	G	A	Sox2_MA0143.3	25	0	+	0	0	.
chr2	40403507	40403508	chr2:40403508:G:C	rs147942572	G	C	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr2	40418398	40418399	chr2:40418399:C:A	rs12105764	C	A	A	Sox2_MA0143.3	-19	0	-	0	0	.
chr2	40551148	40551149	chr2:40551149:T:G	rs7561779	T	G	G	Sox2_MA0143.3	18	0	+	0	0	.
chr2	40556635	40556636	chr2:40556636:A:C	rs17026180	A	C	A	Sox2_MA0143.3	12	0	+	0	0	.
chr2	40666349	40666350	chr2:40666350:T:G	rs2110786	T	G	T	Sox2_MA0143.3	4	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr2	40675289	40675290	chr2:40675290:C:T	rs551891829	C	T	C	Sox2_MA0143.3	-5	0	-	0	0	.
chr2	40886795	40886796	chr2:40886796:T:C	rs62141417	T	C	C	Sox2_MA0143.3	12	0	+	0	0	.
chr2	40898068	40898069	chr2:40898069:A:G	rs207600	A	G	G	Sox2_MA0143.3	24	0	-	0	0	.
chr2	41020605	41020606	chr2:41020606:C:A	rs35261648	C	A	A	Sox2_MA0143.3	-17	0	-	0	0	.
chr2	41095855	41095856	chr2:41095856:G:A	rs11124784	G	A	G	Sox2_MA0143.3	21	0	+	0	0	.
chr2	41210606	41210607	chr2:41210607:C:T	rs1318697	C	T	T	Sox2_MA0143.3	8	0	+	0	0	.
chr2	41320081	41320082	chr2:41320082:C:T	rs1508111	C	T	T	Sox2_MA0143.3	-19	0	+	0	0	.
chr2	41400212	41400213	chr2:41400213:T:C	rs75254843	T	C	T	Sox2_MA0143.3	21	0	-	0	0	.
chr2	41461003	41461004	chr2:41461004:C:A	rs13393138	C	A	C	Sox2_MA0143.3	5	1	-	9.613475778572903	2.7047209992576837	CCATTGTT
chr2	41613149	41613150	chr2:41613150:G:A	rs1805227	G	A	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr2	41621895	41621896	chr2:41621896:G:A	rs72799018	G	A	G	Sox2_MA0143.3	19	0	+	0	0	.
chr2	41649326	41649327	chr2:41649327:G:C	rs17028245	G	C	G	Sox2_MA0143.3	1	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr2	41671273	41671274	chr2:41671274:G:C	rs2374322	G	C	G	Sox2_MA0143.3	16	0	+	0	0	.
chr2	41691838	41691839	chr2:41691839:G:C	rs76361115	G	C	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr2	41737675	41737676	chr2:41737676:T:C	rs34524045	T	C	T	Sox2_MA0143.3	-17	0	-	0	0	.
chr2	41850516	41850517	chr2:41850517:T:C	rs10180866	T	C	C	Sox2_MA0143.3	4	1	+	8.676919043985553	1.7681642646703322	CCATTGTG
chr2	41867248	41867249	chr2:41867249:A:C	rs73930128	A	C	A	Sox2_MA0143.3	11	0	-	0	0	.
chr2	41893302	41893303	chr2:41893303:G:A	rs2374379	G	A	G	Sox2_MA0143.3	15	0	+	0	0	.
chr2	41902454	41902455	chr2:41902455:A:C	rs4952534	A	C	A	Sox2_MA0143.3	26	0	-	0	0	.
chr2	41905624	41905625	chr2:41905625:T:G	rs80065253	T	G	T	Sox2_MA0143.3	23	0	-	0	0	.
chr2	41906201	41906202	chr2:41906202:C:G	rs4283462	C	G	G	Sox2_MA0143.3	12	0	-	0	0	.
chr2	41909996	41909997	chr2:41909997:G:A	rs7583772	G	A	G	Sox2_MA0143.3	20	0	+	0	0	.
chr2	41925878	41925879	chr2:41925879:G:A	rs4952546	G	A	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr2	41967066	41967067	chr2:41967067:A:G	rs72975490	A	G	A	Sox2_MA0143.3	-19	0	+	0	0	.
chr2	41967070	41967071	chr2:41967071:C:T	rs573121434	C	T	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr2	41991038	41991039	chr2:41991039:C:T	rs61597439	C	T	C	Sox2_MA0143.3	20	0	+	0	0	.
chr2	41991040	41991041	chr2:41991041:G:C	rs76192397	G	C	G	Sox2_MA0143.3	22	0	+	0	0	.
chr2	42036580	42036581	chr2:42036581:C:G	rs4952573	C	G	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr2	42086305	42086306	chr2:42086306:T:C	rs17029180	T	C	C	Sox2_MA0143.3	26	0	+	0	0	.
chr2	42099804	42099805	chr2:42099805:T:C	rs13383933	T	C	T	Sox2_MA0143.3	3	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr2	42105021	42105022	chr2:42105022:C:T	rs569462204	C	T	C	Sox2_MA0143.3	22	0	+	0	0	.
chr2	42116842	42116843	chr2:42116843:T:C	rs2261045	T	C	C	Sox2_MA0143.3	7	1	-	3.5547341015215945	8.864090315184848	CCTTTGTA
chr2	42141795	42141796	chr2:42141796:G:C	rs543142566	G	C	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr2	42193150	42193151	chr2:42193151:A:G	rs79724583	A	G	A	Sox2_MA0143.3	2	1	+	8.676919043985553	2.5582713367092715	CCATTGTG
chr2	42193161	42193162	chr2:42193162:A:T	rs10173107	A	T	A	Sox2_MA0143.3	13	0	+	0	0	.
chr2	42210496	42210497	chr2:42210497:C:A	rs76913555	C	A	C	Sox2_MA0143.3	19	0	+	0	0	.
chr2	42231499	42231500	chr2:42231500:A:C	rs10182302	A	C	c	Sox2_MA0143.3	-12	0	+	0	0	.
chr2	42252733	42252734	chr2:42252734:A:C	rs2374405	A	C	A	Sox2_MA0143.3	2	1	+	9.019595766176417	2.900948058900136	CCATTGTC
chr2	42351002	42351003	chr2:42351003:A:G	rs3088290	A	G	A	Sox2_MA0143.3	22	0	-	0	0	.
chr2	42351008	42351009	chr2:42351009:A:G	rs8162	A	G	A	Sox2_MA0143.3	16	0	-	0	0	.
chr2	42368521	42368522	chr2:42368522:G:A	rs59890734	G	A	G	Sox2_MA0143.3	15	0	+	0	0	.
chr2	42465481	42465482	chr2:42465482:G:A	rs112952987	G	A	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr2	42567859	42567860	chr2:42567860:C:T	rs115193466	C	T	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr2	42586106	42586107	chr2:42586107:T:G	rs6734957	T	G	G	Sox2_MA0143.3	3	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr2	42623799	42623800	chr2:42623800:C:A	rs2103339	C	A	C	Sox2_MA0143.3	7	1	+	9.019595766176417	3.3675628303222993	CCATTGTC
chr2	42668001	42668002	chr2:42668002:G:A	rs111475409	G	A	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr2	42723012	42723013	chr2:42723013:C:T	rs1340003135	C	T	C	Sox2_MA0143.3	14	0	-	0	0	.
chr2	42723044	42723045	chr2:42723045:C:T	rs62144300	C	T	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr2	42831980	42831981	chr2:42831981:C:G	rs2119016	C	G	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr2	42845479	42845480	chr2:42845480:A:T	rs79012785	A	T	A	Sox2_MA0143.3	-7	0	+	0	0	.
chr2	42855758	42855759	chr2:42855759:G:A	rs7582737	G	A	G	Sox2_MA0143.3	19	0	-	0	0	.
chr2	42917992	42917993	chr2:42917993:G:A	rs10172548	G	A	G	Sox2_MA0143.3	7	1	+	8.864090315184848	3.5547341015215945	CCTTTGTG
chr2	42924867	42924868	chr2:42924868:C:T	rs190541750	C	T	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr2	42928351	42928352	chr2:42928352:C:G	rs192477297	C	G	C	Sox2_MA0143.3	21	0	-	0	0	.
chr2	42929833	42929834	chr2:42929834:T:C	rs17030206	T	C	T	Sox2_MA0143.3	6	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr2	42959662	42959663	chr2:42959663:G:A	rs115530824	G	A	G	Sox2_MA0143.3	-11	0	+	0	0	.
chr2	42972086	42972087	chr2:42972087:C:T	rs10176222	C	T	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr2	42976527	42976528	chr2:42976528:G:T	rs73923061	G	T	G	Sox2_MA0143.3	26	0	-	0	0	.
chr2	42979237	42979238	chr2:42979238:G:A	rs141880679	G	A	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr2	42984239	42984240	chr2:42984240:G:A	rs744701	G	A	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr2	42984242	42984243	chr2:42984243:A:C	rs744700	A	C	A	Sox2_MA0143.3	-13	0	-	0	0	.
chr2	43000671	43000672	chr2:43000672:G:C	chr2:43000672:G:C	G	C	G	Sox2_MA0143.3	0	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr2	43014564	43014565	chr2:43014565:A:G	rs76568400	A	G	A	Sox2_MA0143.3	-4	0	-	0	0	.
chr2	43021969	43021970	chr2:43021970:C:A	rs55683835	C	A	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr2	43074622	43074623	chr2:43074623:A:G	rs7591954	A	G	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr2	43079089	43079090	chr2:43079090:C:T	rs71420034	C	T	C	Sox2_MA0143.3	18	0	+	0	0	.
chr2	43084420	43084421	chr2:43084421:T:C	rs79931708	T	C	T	Sox2_MA0143.3	-5	0	+	0	0	.
chr2	43091569	43091570	chr2:43091570:A:G	rs7562946	A	G	A	Sox2_MA0143.3	12	0	-	0	0	.
chr2	43100893	43100894	chr2:43100894:G:A	rs144742865	G	A	G	Sox2_MA0143.3	10	0	+	0	0	.
chr2	43101031	43101032	chr2:43101032:A:C	rs892483323	A	C	A	Sox2_MA0143.3	-10	0	-	0	0	.
chr2	43137504	43137505	chr2:43137505:T:C	rs4518007	T	C	C	Sox2_MA0143.3	6	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr2	43137505	43137506	chr2:43137506:G:T	chr2:43137506:G:T	G	T	G	Sox2_MA0143.3	7	1	+	8.864090315184848	9.800647049772198	CCTTTGTG
chr2	43213084	43213085	chr2:43213085:G:C	rs76033569	G	C	G	Sox2_MA0143.3	0	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr2	43281853	43281854	chr2:43281854:C:T	rs13405568	C	T	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr2	43336952	43336953	chr2:43336953:C:G	rs7606622	C	G	C	Sox2_MA0143.3	12	0	+	0	0	.
chr2	43407936	43407937	chr2:43407937:G:C	rs6544655	G	C	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr2	43417416	43417417	chr2:43417417:C:T	rs10186921	C	T	T	Sox2_MA0143.3	1	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr2	43419028	43419029	chr2:43419029:T:A	rs12477432	T	A	A	Sox2_MA0143.3	23	0	-	0	0	.
chr2	43423715	43423716	chr2:43423716:T:C	rs13390794	T	C	T	Sox2_MA0143.3	-4	0	+	0	0	.
chr2	43748690	43748691	chr2:43748691:C:T	rs2060174	C	T	C	Sox2_MA0143.3	1	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr2	43820390	43820391	chr2:43820391:C:T	rs4148189	C	T	T	Sox2_MA0143.3	-12	0	-	0	0	.
chr2	43876097	43876098	chr2:43876098:T:C	rs17606027	T	C	t	Sox2_MA0143.3	4	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr2	44044341	44044342	chr2:44044342:C:T	rs76452508	C	T	C	Sox2_MA0143.3	14	0	+	0	0	.
chr2	44055532	44055533	chr2:44055533:T:C	rs62135478	T	C	T	Sox2_MA0143.3	2	1	-	8.676919043985553	2.5582713367092715	CCATTGTG
chr2	44097552	44097553	chr2:44097553:G:A	rs2167977	G	A	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr2	44125903	44125904	chr2:44125904:A:G	rs1037474	A	G	A	Sox2_MA0143.3	9	0	+	0	0	.
chr2	44136767	44136768	chr2:44136768:T:C	rs35580886	T	C	T	Sox2_MA0143.3	15	0	-	0	0	.
chr2	44278045	44278046	chr2:44278046:T:G	rs713447	T	G	G	Sox2_MA0143.3	27	0	+	0	0	.
chr2	44289142	44289143	chr2:44289143:A:G	rs6715202	A	G	A	Sox2_MA0143.3	2	1	+	9.613475778572903	3.494828071296623	CCATTGTT
chr2	44434077	44434078	chr2:44434078:G:C	rs1067361	G	C	C	Sox2_MA0143.3	7	1	+	8.864090315184848	9.206767037375712	CCTTTGTG
chr2	44498700	44498701	chr2:44498701:C:T	rs76883991	C	T	C	Sox2_MA0143.3	5	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr2	44510520	44510521	chr2:44510521:A:G	rs1223163	A	G	A	Sox2_MA0143.3	-7	0	+	0	0	.
chr2	44582509	44582510	chr2:44582510:T:C	rs17032393	T	C	T	Sox2_MA0143.3	25	0	+	0	0	.
chr2	44716017	44716018	chr2:44716018:T:C	rs190126889	T	C	T	Sox2_MA0143.3	-13	0	-	0	0	.
chr2	44718510	44718511	chr2:44718511:C:A	rs372165472	C	A	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr2	44772360	44772361	chr2:44772361:T:G	rs113912827	T	G	T	Sox2_MA0143.3	22	0	+	0	0	.
chr2	44798446	44798447	chr2:44798447:A:C	rs60436112	A	C	C	Sox2_MA0143.3	11	0	+	0	0	.
chr2	44801727	44801728	chr2:44801728:C:T	rs62134187	C	T	C	Sox2_MA0143.3	7	1	+	9.206767037375712	9.800647049772198	CCTTTGTC
chr2	44818324	44818325	chr2:44818325:T:C	rs6748486	T	C	T	Sox2_MA0143.3	26	0	+	0	0	.
chr2	44923915	44923916	chr2:44923916:T:C	rs511704	T	C	T	Sox2_MA0143.3	6	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr2	44934921	44934922	chr2:44934922:C:T	rs115101817	C	T	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr2	44952295	44952296	chr2:44952296:C:A	rs962323939	C	A	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr2	44964184	44964185	chr2:44964185:C:A	rs10191589	C	A	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr2	44977799	44977800	chr2:44977800:G:T	rs11690627	G	T	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr2	45120702	45120703	chr2:45120703:C:T	rs72799925	C	T	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr2	45120703	45120704	chr2:45120704:A:G	rs6737012	A	G	G	Sox2_MA0143.3	-11	0	+	0	0	.
chr2	45130952	45130953	chr2:45130953:C:G	rs13002446	C	G	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr2	45238659	45238660	chr2:45238660:G:A	rs869183	G	A	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr2	45241700	45241701	chr2:45241701:G:C	rs10490352	G	C	G	Sox2_MA0143.3	23	0	+	0	0	.
chr2	45276029	45276030	chr2:45276030:C:T	rs17320892	C	T	C	Sox2_MA0143.3	19	0	-	0	0	.
chr2	45334445	45334446	chr2:45334446:G:C	rs60039087	G	C	G	Sox2_MA0143.3	11	0	+	0	0	.
chr2	45337636	45337637	chr2:45337637:T:G	chr2:45337637:T:G	T	G	T	Sox2_MA0143.3	15	0	-	0	0	.
chr2	45337658	45337659	chr2:45337659:T:G	rs13430405	T	G	T	Sox2_MA0143.3	-7	0	-	0	0	.
chr2	45337663	45337664	chr2:45337664:G:A	rs10196925	G	A	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr2	45344508	45344509	chr2:45344509:T:C	rs13029877	T	C	T	Sox2_MA0143.3	-15	0	-	0	0	.
chr2	45348586	45348587	chr2:45348587:T:C	rs3911086	T	C	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr2	45364978	45364979	chr2:45364979:C:T	rs114587148	C	T	C	Sox2_MA0143.3	15	0	-	0	0	.
chr2	45459402	45459403	chr2:45459403:A:G	rs116807526	A	G	A	Sox2_MA0143.3	13	0	+	0	0	.
chr2	45459410	45459411	chr2:45459411:C:G	rs115833962	C	G	C	Sox2_MA0143.3	21	0	+	0	0	.
chr2	45540978	45540979	chr2:45540979:G:T	rs62128583	G	T	G	Sox2_MA0143.3	5	1	+	9.206767037375712	2.298012258060492	CCTTTGTC
chr2	45549059	45549060	chr2:45549060:A:G	rs17394541	A	G	G	Sox2_MA0143.3	-3	0	-	0	0	.
chr2	45617574	45617575	chr2:45617575:G:A	rs10209296	G	A	G	Sox2_MA0143.3	-9	0	+	0	0	.
chr2	45656457	45656458	chr2:45656458:G:C	rs588969	G	C	G	Sox2_MA0143.3	0	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr2	45709042	45709043	chr2:45709043:A:C	rs72884472	A	C	A	Sox2_MA0143.3	-5	0	-	0	0	.
chr2	45715223	45715224	chr2:45715224:C:T	rs7606454	C	T	C	Sox2_MA0143.3	25	0	-	0	0	.
chr2	45717145	45717146	chr2:45717146:C:T	rs1522985	C	T	C	Sox2_MA0143.3	0	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr2	45717160	45717161	chr2:45717161:C:A	rs144312340	C	A	C	Sox2_MA0143.3	15	0	+	0	0	.
chr2	45771582	45771583	chr2:45771583:A:C	rs4952770	A	C	C	Sox2_MA0143.3	9	0	+	0	0	.
chr2	45793869	45793870	chr2:45793870:A:G	rs12476798	A	G	A	Sox2_MA0143.3	3	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr2	45849075	45849076	chr2:45849076:C:T	rs79021606	C	T	C	Sox2_MA0143.3	10	0	-	0	0	.
chr2	45860803	45860804	chr2:45860804:C:A	rs78393986	C	A	C	Sox2_MA0143.3	14	0	+	0	0	.
chr2	45860812	45860813	chr2:45860813:C:T	rs1992933	C	T	C	Sox2_MA0143.3	23	0	+	0	0	.
chr2	45964336	45964337	chr2:45964337:T:C	rs12996305	T	C	T	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr2	45984795	45984796	chr2:45984796:T:C	rs2595213	T	C	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr2	46012784	46012785	chr2:46012785:G:A	rs56350372	G	A	A	Sox2_MA0143.3	9	0	+	0	0	.
chr2	46012795	46012796	chr2:46012796:A:T	rs35442838	A	T	T	Sox2_MA0143.3	20	0	+	0	0	.
chr2	46029526	46029527	chr2:46029527:T:C	rs6544868	T	C	C	Sox2_MA0143.3	2	1	+	8.864090315184848	2.5582713367092715	CCTTTGTG
chr2	46048608	46048609	chr2:46048609:C:A	rs67704642	C	A	A	Sox2_MA0143.3	10	0	+	0	0	.
chr2	46063216	46063217	chr2:46063217:A:T	rs62129016	A	T	A	Sox2_MA0143.3	13	0	-	0	0	.
chr2	46102160	46102161	chr2:46102161:C:A	rs4953316	C	A	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr2	46120056	46120057	chr2:46120057:A:T	rs17034581	A	T	A	Sox2_MA0143.3	24	0	+	0	0	.
chr2	46143293	46143294	chr2:46143294:G:A	rs114429863	G	A	G	Sox2_MA0143.3	14	0	+	0	0	.
chr2	46185812	46185813	chr2:46185813:A:G	rs41305590	A	G	A	Sox2_MA0143.3	-20	0	-	0	0	.
chr2	46225137	46225138	chr2:46225138:G:T	rs4952809	G	T	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr2	46284799	46284800	chr2:46284800:C:T	rs1000531	C	T	T	Sox2_MA0143.3	17	0	+	0	0	.
chr2	46300400	46300401	chr2:46300401:G:C	rs1867782	G	C	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr2	46311654	46311655	chr2:46311655:G:A	rs17034950	G	A	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr2	46314234	46314235	chr2:46314235:G:A	rs57841627	G	A	G	Sox2_MA0143.3	16	0	+	0	0	.
chr2	46367408	46367409	chr2:46367409:G:C	rs79724280	G	C	G	Sox2_MA0143.3	-2	0	+	0	0	.
chr2	46369293	46369294	chr2:46369294:G:A	rs1374749	G	A	A	Sox2_MA0143.3	24	0	-	0	0	.
chr2	46404289	46404290	chr2:46404290:T:C	rs4952823	T	C	T	Sox2_MA0143.3	12	0	-	0	0	.
chr2	46404943	46404944	chr2:46404944:C:T	rs9677412	C	T	T	Sox2_MA0143.3	23	0	+	0	0	.
chr2	46490155	46490156	chr2:46490156:C:T	rs60656270	C	T	C	Sox2_MA0143.3	-5	0	-	0	0	.
chr2	46490950	46490951	chr2:46490951:G:A	rs12986653	G	A	G	Sox2_MA0143.3	18	0	+	0	0	.
chr2	46492116	46492117	chr2:46492117:T:G	rs78970459	T	G	T	Sox2_MA0143.3	-2	0	-	0	0	.
chr2	46494100	46494101	chr2:46494101:C:T	rs13007688	C	T	C	Sox2_MA0143.3	26	0	-	0	0	.
chr2	46508147	46508148	chr2:46508148:G:A	rs62134696	G	A	G	Sox2_MA0143.3	10	0	+	0	0	.
chr2	46538595	46538596	chr2:46538596:T:A	rs949031250	T	A	T	Sox2_MA0143.3	-14	0	+	0	0	.
chr2	46547763	46547764	chr2:46547764:C:T	rs116735098	C	T	C	Sox2_MA0143.3	1	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr2	46564709	46564710	chr2:46564710:G:A	rs62134759	G	A	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr2	46573557	46573558	chr2:46573558:T:C	rs7557785	T	C	T	Sox2_MA0143.3	-7	0	+	0	0	.
chr2	46618709	46618710	chr2:46618710:A:G	rs2122715	A	G	A	Sox2_MA0143.3	18	0	+	0	0	.
chr2	46664025	46664026	chr2:46664026:G:C	rs991861	G	C	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr2	46666192	46666193	chr2:46666193:C:T	rs1563406	C	T	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr2	46770462	46770463	chr2:46770463:A:G	rs991559	A	G	A	Sox2_MA0143.3	-12	0	+	0	0	.
chr2	46817137	46817138	chr2:46817138:C:T	rs2289930	C	T	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr2	46955600	46955601	chr2:46955601:A:C	rs6544942	A	C	A	Sox2_MA0143.3	25	0	-	0	0	.
chr2	46955624	46955625	chr2:46955625:G:A	rs1036295	G	A	A	Sox2_MA0143.3	1	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr2	46978781	46978782	chr2:46978782:C:T	rs149360779	C	T	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr2	47029662	47029663	chr2:47029663:G:C	rs7602479	G	C	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr2	47033283	47033284	chr2:47033284:C:T	rs76953621	C	T	C	Sox2_MA0143.3	18	0	+	0	0	.
chr2	47058712	47058713	chr2:47058713:T:G	rs150031101	T	G	T	Sox2_MA0143.3	10	0	-	0	0	.
chr2	47070087	47070088	chr2:47070088:G:A	rs75399165	G	A	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr2	47079154	47079155	chr2:47079155:C:T	rs6714382	C	T	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr2	47119428	47119429	chr2:47119429:C:G	rs1404771	C	G	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr2	47175989	47175990	chr2:47175990:G:T	rs878665	G	T	G	Sox2_MA0143.3	18	0	-	0	0	.
chr2	47198870	47198871	chr2:47198871:C:A	rs6747816	C	A	A	Sox2_MA0143.3	21	0	+	0	0	.
chr2	47220371	47220372	chr2:47220372:G:T	rs11899830	G	T	T	Sox2_MA0143.3	11	0	+	0	0	.
chr2	47271411	47271412	chr2:47271412:T:C	rs145294230	T	C	T	Sox2_MA0143.3	9	0	+	0	0	.
chr2	47345223	47345224	chr2:47345224:G:C	rs17036526	G	C	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr2	47489042	47489043	chr2:47489043:C:A	rs75340640	C	A	C	Sox2_MA0143.3	22	0	-	0	0	.
chr2	47581714	47581715	chr2:47581715:T:C	rs115477902	T	C	T	Sox2_MA0143.3	-19	0	-	0	0	.
chr2	47623937	47623938	chr2:47623938:G:A	rs10209127	G	A	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr2	47645263	47645264	chr2:47645264:C:A	rs12712995	C	A	C	Sox2_MA0143.3	0	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr2	47689735	47689736	chr2:47689736:C:A	rs77932182	C	A	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr2	47725091	47725092	chr2:47725092:T:C	rs797689	T	C	C	Sox2_MA0143.3	4	1	+	3.5547341015215945	-3.3540206777936254	CCTTTGTA
chr2	47986564	47986565	chr2:47986565:C:T	rs75172353	C	T	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr2	48111482	48111483	chr2:48111483:T:G	rs13384445	T	G	T	Sox2_MA0143.3	8	0	-	0	0	.
chr2	48111895	48111896	chr2:48111896:C:T	rs77751336	C	T	C	Sox2_MA0143.3	-12	0	-	0	0	.
chr2	48111902	48111903	chr2:48111903:C:T	rs73927942	C	T	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr2	48112173	48112174	chr2:48112174:C:T	rs183321268	C	T	G	Sox2_MA0143.3	27	0	+	0	0	.
chr2	48168346	48168347	chr2:48168347:A:G	rs6733558	A	G	A	Sox2_MA0143.3	22	0	-	0	0	.
chr2	48313591	48313592	chr2:48313592:C:T	rs62138807	C	T	C	Sox2_MA0143.3	23	0	+	0	0	.
chr2	48320162	48320163	chr2:48320163:A:T	rs11684517	A	T	A	Sox2_MA0143.3	27	0	+	0	0	.
chr2	48329549	48329550	chr2:48329550:G:A	rs72818502	G	A	G	Sox2_MA0143.3	14	0	-	0	0	.
chr2	48396042	48396043	chr2:48396043:G:C	rs149832454	G	C	g	Sox2_MA0143.3	22	0	+	0	0	.
chr2	48396044	48396045	chr2:48396045:C:T	rs12328506	C	T	t	Sox2_MA0143.3	24	0	+	0	0	.
chr2	48398299	48398300	chr2:48398300:T:C	rs78208531	T	C	t	Sox2_MA0143.3	-14	0	-	0	0	.
chr2	48443862	48443863	chr2:48443863:A:G	rs76984715	A	G	A	Sox2_MA0143.3	11	0	-	0	0	.
chr2	48443879	48443880	chr2:48443880:G:T	rs76874430	G	T	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr2	48585983	48585984	chr2:48585984:G:A	chr2:48585984:G:A	G	A	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr2	48707578	48707579	chr2:48707579:G:T	rs188496537	G	T	G	Sox2_MA0143.3	10	0	+	0	0	.
chr2	48888363	48888364	chr2:48888364:T:C	rs78963998	T	C	t	Sox2_MA0143.3	24	0	+	0	0	.
chr2	48893965	48893966	chr2:48893966:G:C	rs34849254	G	C	G	Sox2_MA0143.3	21	0	-	0	0	.
chr2	48902815	48902816	chr2:48902816:A:G	rs62161791	A	G	A	Sox2_MA0143.3	26	0	+	0	0	.
chr2	48985059	48985060	chr2:48985060:C:G	rs3788986	C	G	C	Sox2_MA0143.3	-20	0	-	0	0	.
chr2	49066936	49066937	chr2:49066937:T:C	rs13003970	T	C	T	Sox2_MA0143.3	-19	0	+	0	0	.
chr2	49066975	49066976	chr2:49066976:C:G	rs13027322	C	G	G	Sox2_MA0143.3	20	0	+	0	0	.
chr2	49081862	49081863	chr2:49081863:C:T	rs35697787	C	T	T	Sox2_MA0143.3	21	0	+	0	0	.
chr2	49111193	49111194	chr2:49111194:C:G	rs960038	C	G	G	Sox2_MA0143.3	21	0	-	0	0	.
chr2	49346232	49346233	chr2:49346233:G:C	rs9789491	G	C	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr2	49472608	49472609	chr2:49472609:C:T	rs13005255	C	T	T	Sox2_MA0143.3	27	0	+	0	0	.
chr2	49548091	49548092	chr2:49548092:G:A	chr2:49548092:G:A	G	A	G	Sox2_MA0143.3	21	0	-	0	0	.
chr2	49792245	49792246	chr2:49792246:T:A	rs10190275	T	A	T	Sox2_MA0143.3	14	0	-	0	0	.
chr2	49858826	49858827	chr2:49858827:A:G	rs1363047	A	G	A	Sox2_MA0143.3	25	0	-	0	0	.
chr2	49883192	49883193	chr2:49883193:G:A	rs138593927	G	A	G	Sox2_MA0143.3	18	0	-	0	0	.
chr2	49983105	49983106	chr2:49983106:G:C	rs7569617	G	C	G	Sox2_MA0143.3	-14	0	+	0	0	.
chr2	50000725	50000726	chr2:50000726:T:C	rs10495991	T	C	C	Sox2_MA0143.3	7	1	-	3.5547341015215945	8.864090315184848	CCTTTGTA
chr2	50335698	50335699	chr2:50335699:T:C	rs17040471	T	C	T	Sox2_MA0143.3	-19	0	-	0	0	.
chr2	50371188	50371189	chr2:50371189:T:C	rs12465806	T	C	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr2	50430938	50430939	chr2:50430939:C:T	rs6743117	C	T	C	Sox2_MA0143.3	14	0	-	0	0	.
chr2	50720373	50720374	chr2:50720374:C:G	rs858942	C	G	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr2	51014084	51014085	chr2:51014085:G:A	rs17041192	G	A	G	Sox2_MA0143.3	22	0	-	0	0	.
chr2	51026109	51026110	chr2:51026110:A:G	rs75809661	A	G	A	Sox2_MA0143.3	15	0	-	0	0	.
chr2	51160352	51160353	chr2:51160353:C:G	rs2353307	C	G	G	Sox2_MA0143.3	18	0	+	0	0	.
chr2	51162104	51162105	chr2:51162105:G:C	rs12476987	G	C	G	Sox2_MA0143.3	10	0	+	0	0	.
chr2	51252208	51252209	chr2:51252209:C:T	rs2098444	C	T	C	Sox2_MA0143.3	25	0	-	0	0	.
chr2	51352407	51352408	chr2:51352408:C:T	rs1541583	C	T	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr2	51491309	51491310	chr2:51491310:A:G	rs13006788	A	G	a	Sox2_MA0143.3	4	1	-	8.864090315184848	1.9553355358696274	CCTTTGTG
chr2	51505665	51505666	chr2:51505666:G:A	rs28957968	G	A	N	Sox2_MA0143.3	17	0	-	0	0	.
chr2	51516959	51516960	chr2:51516960:G:A	rs13027868	G	A	a	Sox2_MA0143.3	13	0	+	0	0	.
chr2	51615272	51615273	chr2:51615273:G:A	rs1606979	G	A	G	Sox2_MA0143.3	12	0	-	0	0	.
chr2	51673946	51673947	chr2:51673947:G:A	rs1400104	G	A	A	Sox2_MA0143.3	13	0	-	0	0	.
chr2	52000515	52000516	chr2:52000516:A:T	rs12476894	A	T	A	Sox2_MA0143.3	-18	0	-	0	0	.
chr2	52210216	52210217	chr2:52210217:A:T	rs4028077	A	T	A	Sox2_MA0143.3	-3	0	+	0	0	.
chr2	52307050	52307051	chr2:52307051:G:T	rs12616416	G	T	T	Sox2_MA0143.3	25	0	+	0	0	.
chr2	52431658	52431659	chr2:52431659:A:T	rs12713202	A	T	T	Sox2_MA0143.3	9	0	-	0	0	.
chr2	52431662	52431663	chr2:52431663:C:A	rs12713203	C	A	A	Sox2_MA0143.3	5	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr2	52470569	52470570	chr2:52470570:A:G	rs55688901	A	G	a	Sox2_MA0143.3	20	0	-	0	0	.
chr2	52470606	52470607	chr2:52470607:T:C	rs4971829	T	C	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr2	52811327	52811328	chr2:52811328:C:A	rs7575309	C	A	c	Sox2_MA0143.3	26	0	+	0	0	.
chr2	52894837	52894838	chr2:52894838:G:A	rs62138249	G	A	G	Sox2_MA0143.3	-12	0	+	0	0	.
chr2	52962501	52962502	chr2:52962502:C:T	rs62140326	C	T	C	Sox2_MA0143.3	19	0	+	0	0	.
chr2	52970049	52970050	chr2:52970050:A:G	rs11885376	A	G	A	Sox2_MA0143.3	-2	0	-	0	0	.
chr2	53001398	53001399	chr2:53001399:G:C	rs72795321	G	C	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr2	53021576	53021577	chr2:53021577:A:C	rs79287976	A	C	A	Sox2_MA0143.3	-18	0	+	0	0	.
chr2	53021615	53021616	chr2:53021616:G:T	rs997258837	G	T	G	Sox2_MA0143.3	21	0	+	0	0	.
chr2	53028644	53028645	chr2:53028645:G:T	rs6719459	G	T	T	Sox2_MA0143.3	20	0	-	0	0	.
chr2	53104743	53104744	chr2:53104744:C:T	rs75130543	C	T	C	Sox2_MA0143.3	-12	0	-	0	0	.
chr2	53150602	53150603	chr2:53150603:T:C	rs12617928	T	C	T	Sox2_MA0143.3	12	0	-	0	0	.
chr2	53185313	53185314	chr2:53185314:C:T	rs4672248	C	T	T	Sox2_MA0143.3	-12	0	+	0	0	.
chr2	53309728	53309729	chr2:53309729:A:T	rs2161782	A	T	a	Sox2_MA0143.3	15	0	-	0	0	.
chr2	53313555	53313556	chr2:53313556:A:C	rs11895925	A	C	A	Sox2_MA0143.3	13	0	-	0	0	.
chr2	53347402	53347403	chr2:53347403:G:C	rs77831059	G	C	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr2	53431601	53431602	chr2:53431602:A:T	rs6754509	A	T	A	Sox2_MA0143.3	20	0	-	0	0	.
chr2	53456171	53456172	chr2:53456172:C:G	rs35090707	C	G	G	Sox2_MA0143.3	25	0	-	0	0	.
chr2	53460084	53460085	chr2:53460085:G:A	rs2357356	G	A	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr2	53473486	53473487	chr2:53473487:T:C	rs184252424	T	C	T	Sox2_MA0143.3	-4	0	-	0	0	.
chr2	53491089	53491090	chr2:53491090:A:G	rs6733742	A	G	G	Sox2_MA0143.3	10	0	-	0	0	.
chr2	53604934	53604935	chr2:53604935:C:T	rs2357490	C	T	A	Sox2_MA0143.3	-11	0	-	0	0	.
chr2	53627426	53627427	chr2:53627427:T:C	rs774894872	T	C	T	Sox2_MA0143.3	-9	0	-	0	0	.
chr2	53756881	53756882	chr2:53756882:T:C	rs78657753	T	C	T	Sox2_MA0143.3	-10	0	+	0	0	.
chr2	53865846	53865847	chr2:53865847:C:T	rs805379	C	T	T	Sox2_MA0143.3	8	0	-	0	0	.
chr2	53877766	53877767	chr2:53877767:T:C	rs763963675	T	C	T	Sox2_MA0143.3	-20	0	+	0	0	.
chr2	53878872	53878873	chr2:53878873:C:A	rs805394	C	A	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr2	53961854	53961855	chr2:53961855:A:G	rs552118182	A	G	A	Sox2_MA0143.3	-15	0	-	0	0	.
chr2	54116435	54116436	chr2:54116436:T:C	rs551631211	T	C	T	Sox2_MA0143.3	-19	0	-	0	0	.
chr2	54265533	54265534	chr2:54265534:C:T	rs843682	C	T	T	Sox2_MA0143.3	-10	0	-	0	0	.
chr2	54331876	54331877	chr2:54331877:C:T	rs843667	C	T	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr2	54366694	54366695	chr2:54366695:C:G	rs35123043	C	G	C	Sox2_MA0143.3	10	0	-	0	0	.
chr2	54570118	54570119	chr2:54570119:T:A	rs76470560	T	A	T	Sox2_MA0143.3	-15	0	+	0	0	.
chr2	54572617	54572618	chr2:54572618:C:T	rs116699466	C	T	C	Sox2_MA0143.3	1	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr2	54596298	54596299	chr2:54596299:C:T	rs753208694	C	T	c	Sox2_MA0143.3	-8	0	-	0	0	.
chr2	54619767	54619768	chr2:54619768:C:T	rs184270713	C	T	C	Sox2_MA0143.3	27	0	+	0	0	.
chr2	54670057	54670058	chr2:54670058:A:T	rs57638221	A	T	A	Sox2_MA0143.3	-15	0	-	0	0	.
chr2	54673761	54673762	chr2:54673762:C:G	rs142874192	C	G	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr2	54701517	54701518	chr2:54701518:A:G	rs354212	A	G	A	Sox2_MA0143.3	-11	0	-	0	0	.
chr2	54857382	54857383	chr2:54857383:T:C	chr2:54857383:T:C	T	C	T	Sox2_MA0143.3	-18	0	-	0	0	.
chr2	54967451	54967452	chr2:54967452:C:T	rs72910860	C	T	C	Sox2_MA0143.3	25	0	-	0	0	.
chr2	55004378	55004379	chr2:55004379:G:A	rs34378852	G	A	G	Sox2_MA0143.3	-16	0	-	0	0	.
chr2	55048191	55048192	chr2:55048192:G:A	rs12473538	G	A	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr2	55056248	55056249	chr2:55056249:C:T	rs72912597	C	T	T	Sox2_MA0143.3	26	0	+	0	0	.
chr2	55093036	55093037	chr2:55093037:T:C	rs6705567	T	C	t	Sox2_MA0143.3	18	0	+	0	0	.
chr2	55102416	55102417	chr2:55102417:A:C	rs1223826347	A	C	A	Sox2_MA0143.3	27	0	-	0	0	.
chr2	55116051	55116052	chr2:55116052:C:T	rs960869791	C	T	C	Sox2_MA0143.3	17	0	+	0	0	.
chr2	55166782	55166783	chr2:55166783:G:A	rs76502416	G	A	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr2	55310960	55310961	chr2:55310961:A:G	rs6746287	A	G	G	Sox2_MA0143.3	-16	0	-	0	0	.
chr2	55403876	55403877	chr2:55403877:T:C	rs6721972	T	C	T	Sox2_MA0143.3	3	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr2	55453303	55453304	chr2:55453304:A:G	rs60312537	A	G	A	Sox2_MA0143.3	-6	0	+	0	0	.
chr2	55518753	55518754	chr2:55518754:T:C	rs115528032	T	C	T	Sox2_MA0143.3	2	1	-	8.676919043985553	2.5582713367092715	CCATTGTG
chr2	55569701	55569702	chr2:55569702:G:A	rs13027803	G	A	G	Sox2_MA0143.3	10	0	+	0	0	.
chr2	55585884	55585885	chr2:55585885:C:G	rs75368071	C	G	C	Sox2_MA0143.3	0	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr2	55616593	55616594	chr2:55616594:G:A	rs150318495	G	A	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr2	55718408	55718409	chr2:55718409:T:C	rs142097450	T	C	T	Sox2_MA0143.3	-9	0	+	0	0	.
chr2	55773429	55773430	chr2:55773430:G:C	rs4672072	G	C	-	Sox2_MA0143.3	18	0	+	0	0	.
chr2	55936366	55936367	chr2:55936367:C:A	rs4560150	C	A	A	Sox2_MA0143.3	12	0	-	0	0	.
chr2	55958736	55958737	chr2:55958737:A:C	rs17279030	A	C	A	Sox2_MA0143.3	16	0	+	0	0	.
chr2	56077757	56077758	chr2:56077758:T:C	rs76246634	T	C	T	Sox2_MA0143.3	11	0	+	0	0	.
chr2	56127828	56127829	chr2:56127829:C:T	rs1023713	C	T	T	Sox2_MA0143.3	-16	0	+	0	0	.
chr2	56183409	56183410	chr2:56183410:C:G	rs7591637	C	G	G	Sox2_MA0143.3	7	1	-	8.864090315184848	9.206767037375712	CCTTTGTG
chr2	56211053	56211054	chr2:56211054:T:C	rs6749100	T	C	T	Sox2_MA0143.3	-10	0	+	0	0	.
chr2	56237498	56237499	chr2:56237499:A:G	rs10490397	A	G	A	Sox2_MA0143.3	-14	0	+	0	0	.
chr2	56266627	56266628	chr2:56266628:A:G	rs13025817	A	G	A	Sox2_MA0143.3	12	0	+	0	0	.
chr2	56334129	56334130	chr2:56334130:T:C	rs1990759	T	C	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr2	56348583	56348584	chr2:56348584:C:T	rs76035512	C	T	C	Sox2_MA0143.3	16	0	-	0	0	.
chr2	56372218	56372219	chr2:56372219:A:G	rs11694209	A	G	A	Sox2_MA0143.3	-13	0	+	0	0	.
chr2	56483271	56483272	chr2:56483272:T:C	rs6753780	T	C	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr2	56532827	56532828	chr2:56532828:G:C	rs1304898	G	C	C	Sox2_MA0143.3	10	0	+	0	0	.
chr2	56534482	56534483	chr2:56534483:G:T	rs62161643	G	T	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr2	56534490	56534491	chr2:56534491:A:G	rs4671282	A	G	G	Sox2_MA0143.3	2	1	+	9.019595766176417	2.900948058900136	CCATTGTC
chr2	56739575	56739576	chr2:56739576:C:T	rs978567	C	T	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr2	56972633	56972634	chr2:56972634:A:T	rs75692238	A	T	A	Sox2_MA0143.3	-18	0	-	0	0	.
chr2	57012529	57012530	chr2:57012530:G:A	rs35461737	G	A	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr2	57170287	57170288	chr2:57170288:T:C	rs6545627	T	C	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr2	57501168	57501169	chr2:57501169:T:A	rs2243837	T	A	A	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr2	57501358	57501359	chr2:57501359:C:T	rs2243842	C	T	C	Sox2_MA0143.3	15	0	+	0	0	.
chr2	57534629	57534630	chr2:57534630:C:T	rs78109218	C	T	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr2	57692701	57692702	chr2:57692702:G:C	rs137873961	G	C	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr2	57890790	57890791	chr2:57890791:C:G	rs2678914	C	G	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr2	57890827	57890828	chr2:57890828:C:G	rs12328047	C	G	C	Sox2_MA0143.3	20	0	+	0	0	.
chr2	57944151	57944152	chr2:57944152:A:G	rs1518394	A	G	A	Sox2_MA0143.3	8	0	+	0	0	.
chr2	58048366	58048367	chr2:58048367:C:T	rs148034795	C	T	C	Sox2_MA0143.3	0	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr2	58112441	58112442	chr2:58112442:A:T	rs10203887	A	T	A	Sox2_MA0143.3	23	0	+	0	0	.
chr2	58425302	58425303	chr2:58425303:A:T	rs10179027	A	T	T	Sox2_MA0143.3	26	0	-	0	0	.
chr2	58460759	58460760	chr2:58460760:G:A	rs17399306	G	A	G	Sox2_MA0143.3	-2	0	+	0	0	.
chr2	58674374	58674375	chr2:58674375:C:T	rs6545696	C	T	T	Sox2_MA0143.3	25	0	+	0	0	.
chr2	58709834	58709835	chr2:58709835:C:T	rs10211534	C	T	C	Sox2_MA0143.3	16	0	-	0	0	.
chr2	58921974	58921975	chr2:58921975:T:A	rs6545708	T	A	T	Sox2_MA0143.3	6	1	+	8.676919043985553	1.7681642646703326	CCATTGTG
chr2	58923841	58923842	chr2:58923842:T:C	rs73931772	T	C	T	Sox2_MA0143.3	-5	0	+	0	0	.
chr2	58923845	58923846	chr2:58923846:T:C	rs76040012	T	C	T	Sox2_MA0143.3	-1	0	+	0	0	.
chr2	59387858	59387859	chr2:59387859:T:C	rs11125792	T	C	T	Sox2_MA0143.3	-20	0	+	0	0	.
chr2	59414128	59414129	chr2:59414129:T:C	rs76963088	T	C	T	Sox2_MA0143.3	14	0	+	0	0	.
chr2	59458689	59458690	chr2:59458690:G:A	rs17050179	G	A	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr2	59735060	59735061	chr2:59735061:C:G	rs57412655	C	G	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr2	59749503	59749504	chr2:59749504:G:A	rs17050408	G	A	G	Sox2_MA0143.3	19	0	-	0	0	.
chr2	60045475	60045476	chr2:60045476:T:C	rs13021024	T	C	T	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr2	60056213	60056214	chr2:60056214:T:A	rs60432528	T	A	T	Sox2_MA0143.3	-6	0	-	0	0	.
chr2	60215379	60215380	chr2:60215380:G:A	rs17010888	G	A	A	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr2	60259018	60259019	chr2:60259019:A:G	rs1553935	A	G	A	Sox2_MA0143.3	27	0	+	0	0	.
chr2	60295526	60295527	chr2:60295527:T:C	rs7578291	T	C	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr2	60318058	60318059	chr2:60318059:A:G	rs117213068	A	G	A	Sox2_MA0143.3	-7	0	-	0	0	.
chr2	60366868	60366869	chr2:60366869:G:A	rs77980704	G	A	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr2	60434868	60434869	chr2:60434869:A:G	rs56180823	A	G	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr2	60545650	60545651	chr2:60545651:G:A	rs572345648	G	A	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr2	60597496	60597497	chr2:60597497:C:A	rs114358219	C	A	C	Sox2_MA0143.3	15	0	+	0	0	.
chr2	60614456	60614457	chr2:60614457:C:T	rs35800834	C	T	C	Sox2_MA0143.3	5	1	-	9.019595766176417	2.110840986861197	CCATTGTC
chr2	60614476	60614477	chr2:60614477:G:A	rs35891239	G	A	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr2	60706157	60706158	chr2:60706158:C:T	rs7580487	C	T	T	Sox2_MA0143.3	16	0	-	0	0	.
chr2	60756080	60756081	chr2:60756081:C:T	rs17538113	C	T	C	Sox2_MA0143.3	12	0	-	0	0	.
chr2	60759714	60759715	chr2:60759715:C:G	rs62149378	C	G	C	Sox2_MA0143.3	0	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr2	60813886	60813887	chr2:60813887:A:G	rs9989783	A	G	a	Sox2_MA0143.3	-7	0	-	0	0	.
chr2	60885038	60885039	chr2:60885039:A:T	rs78958792	A	T	A	Sox2_MA0143.3	-6	0	-	0	0	.
chr2	61141396	61141397	chr2:61141397:T:G	rs1177274	T	G	G	Sox2_MA0143.3	20	0	+	0	0	.
chr2	61144342	61144343	chr2:61144343:A:G	rs1177275	A	G	A	Sox2_MA0143.3	26	0	+	0	0	.
chr2	61242600	61242601	chr2:61242601:T:G	rs142694014	T	G	T	Sox2_MA0143.3	9	0	-	0	0	.
chr2	61392347	61392348	chr2:61392348:G:A	rs72813590	G	A	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr2	61660851	61660852	chr2:61660852:G:A	rs74687022	G	A	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr2	61676155	61676156	chr2:61676156:A:G	rs7563064	A	G	A	Sox2_MA0143.3	-6	0	-	0	0	.
chr2	61695773	61695774	chr2:61695774:A:C	rs7595206	A	C	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr2	61759425	61759426	chr2:61759426:T:C	chr2:61759426:T:C	T	C	T	Sox2_MA0143.3	19	0	+	0	0	.
chr2	61762622	61762623	chr2:61762623:C:T	rs114487507	C	T	C	Sox2_MA0143.3	17	0	-	0	0	.
chr2	61978806	61978807	chr2:61978807:C:T	rs758064660	C	T	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr2	62118343	62118344	chr2:62118344:T:G	rs557875344	T	G	T	Sox2_MA0143.3	18	0	-	0	0	.
chr2	62154338	62154339	chr2:62154339:T:C	rs3943540	T	C	C	Sox2_MA0143.3	14	0	+	0	0	.
chr2	62204997	62204998	chr2:62204998:G:A	rs7605321	G	A	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr2	62307357	62307358	chr2:62307358:T:C	rs4672499	T	C	T	Sox2_MA0143.3	-6	0	+	0	0	.
chr2	62311545	62311546	chr2:62311546:T:C	rs11683263	T	C	C	Sox2_MA0143.3	23	0	-	0	0	.
chr2	62443363	62443364	chr2:62443364:C:T	rs12467796	C	T	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr2	62452373	62452374	chr2:62452374:G:A	rs76503615	G	A	G	Sox2_MA0143.3	16	0	+	0	0	.
chr2	62456410	62456411	chr2:62456411:G:C	rs6740094	G	C	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr2	62459408	62459409	chr2:62459409:G:A	rs77016514	G	A	G	Sox2_MA0143.3	17	0	+	0	0	.
chr2	62578941	62578942	chr2:62578942:C:T	rs62179979	C	T	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr2	62589883	62589884	chr2:62589884:G:C	rs17576670	G	C	G	Sox2_MA0143.3	21	0	-	0	0	.
chr2	62589909	62589910	chr2:62589910:C:G	rs17517427	C	G	C	Sox2_MA0143.3	-5	0	-	0	0	.
chr2	62662642	62662643	chr2:62662643:C:A	rs12617665	C	A	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr2	62774640	62774641	chr2:62774641:C:T	rs143398974	C	T	C	Sox2_MA0143.3	25	0	-	0	0	.
chr2	62793834	62793835	chr2:62793835:A:G	rs12989754	A	G	A	Sox2_MA0143.3	3	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr2	63334979	63334980	chr2:63334980:A:G	rs13021852	A	G	A	Sox2_MA0143.3	2	1	-	9.206767037375712	2.900948058900136	CCTTTGTC
chr2	63424861	63424862	chr2:63424862:G:A	rs10209490	G	A	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr2	63615264	63615265	chr2:63615265:C:T	rs72806058	C	T	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr2	63645344	63645345	chr2:63645345:C:T	rs262479	C	T	T	Sox2_MA0143.3	-2	0	+	0	0	.
chr2	63676232	63676233	chr2:63676233:C:T	rs262528	C	T	T	Sox2_MA0143.3	-6	0	-	0	0	.
chr2	63992176	63992177	chr2:63992177:T:C	rs6716322	T	C	t	Sox2_MA0143.3	14	0	-	0	0	.
chr2	64064645	64064646	chr2:64064646:T:C	rs329483	T	C	T	Sox2_MA0143.3	-9	0	+	0	0	.
chr2	64094688	64094689	chr2:64094689:A:G	rs3731962	A	G	G	Sox2_MA0143.3	8	0	-	0	0	.
chr2	64152696	64152697	chr2:64152697:G:T	rs34212947	G	T	A	Sox2_MA0143.3	24	0	-	0	0	.
chr2	64211628	64211629	chr2:64211629:A:T	rs538848008	A	T	A	Sox2_MA0143.3	-15	0	-	0	0	.
chr2	64223481	64223482	chr2:64223482:G:A	rs1001742656	G	A	G	Sox2_MA0143.3	20	0	+	0	0	.
chr2	64322737	64322738	chr2:64322738:C:T	rs737471	C	T	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr2	64322771	64322772	chr2:64322772:T:A	rs737470	T	A	A	Sox2_MA0143.3	24	0	+	0	0	.
chr2	64383158	64383159	chr2:64383159:T:C	rs2114433	T	C	T	Sox2_MA0143.3	-18	0	-	0	0	.
chr2	64410093	64410094	chr2:64410094:A:G	rs868985	A	G	A	Sox2_MA0143.3	-19	0	+	0	0	.
chr2	64486207	64486208	chr2:64486208:C:T	rs147910495	C	T	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr2	64489984	64489985	chr2:64489985:G:A	rs12477656	G	A	G	Sox2_MA0143.3	17	0	-	0	0	.
chr2	64607624	64607625	chr2:64607625:G:T	rs557823577	G	T	G	Sox2_MA0143.3	14	0	-	0	0	.
chr2	64654295	64654296	chr2:64654296:T:G	rs556274850	T	G	T	Sox2_MA0143.3	8	0	-	0	0	.
chr2	64655912	64655913	chr2:64655913:C:T	rs143091859	C	T	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr2	64782190	64782191	chr2:64782191:G:A	rs7579244	G	A	G	Sox2_MA0143.3	25	0	-	0	0	.
chr2	64793342	64793343	chr2:64793343:C:T	rs17029430	C	T	T	Sox2_MA0143.3	0	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr2	64823933	64823934	chr2:64823934:C:T	rs9750002	C	T	C	Sox2_MA0143.3	27	0	-	0	0	.
chr2	64857550	64857551	chr2:64857551:T:G	rs10205241	T	G	T	Sox2_MA0143.3	-1	0	+	0	0	.
chr2	64858289	64858290	chr2:64858290:A:C	rs12613499	A	C	A	Sox2_MA0143.3	-4	0	+	0	0	.
chr2	64866753	64866754	chr2:64866754:C:A	rs1861851	C	A	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr2	64975539	64975540	chr2:64975540:A:G	rs113002913	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr2	64988681	64988682	chr2:64988682:C:G	rs549908251	C	G	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr2	65053214	65053215	chr2:65053215:C:T	rs13033002	C	T	C	Sox2_MA0143.3	12	0	-	0	0	.
chr2	65082042	65082043	chr2:65082043:A:G	rs35001546	A	G	A	Sox2_MA0143.3	4	1	-	9.800647049772198	2.8918922704569785	CCTTTGTT
chr2	65130833	65130834	chr2:65130834:C:T	rs116234424	C	T	C	Sox2_MA0143.3	10	0	+	0	0	.
chr2	65130845	65130846	chr2:65130846:C:T	rs987441698	C	T	C	Sox2_MA0143.3	22	0	+	0	0	.
chr2	65133924	65133925	chr2:65133925:C:A	rs1420186	C	A	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr2	65320083	65320084	chr2:65320084:A:G	rs573947488	A	G	A	Sox2_MA0143.3	2	1	-	3.5547341015215945	-2.751084876953981	CCTTTGTA
chr2	65354065	65354066	chr2:65354066:A:G	rs11695373	A	G	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr2	65369522	65369523	chr2:65369523:A:G	rs906577	A	G	G	Sox2_MA0143.3	12	0	-	0	0	.
chr2	65379856	65379857	chr2:65379857:A:C	rs268139	A	C	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr2	65405640	65405641	chr2:65405641:G:C	rs13023210	G	C	G	Sox2_MA0143.3	12	0	-	0	0	.
chr2	65531220	65531221	chr2:65531221:A:G	rs3845816	A	G	A	Sox2_MA0143.3	4	1	-	3.5547341015215945	-3.3540206777936254	CCTTTGTA
chr2	65730553	65730554	chr2:65730554:G:A	rs3815605	G	A	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr2	65844230	65844231	chr2:65844231:G:T	rs6751687	G	T	T	Sox2_MA0143.3	24	0	+	0	0	.
chr2	65857061	65857062	chr2:65857062:A:G	rs3845822	A	G	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr2	65935277	65935278	chr2:65935278:T:C	rs7598978	T	C	t	Sox2_MA0143.3	-15	0	-	0	0	.
chr2	66082681	66082682	chr2:66082682:T:A	rs12994313	T	A	T	Sox2_MA0143.3	20	0	+	0	0	.
chr2	66305999	66306000	chr2:66306000:C:T	chr2:66306000:C:T	C	T	C	Sox2_MA0143.3	1	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr2	66434136	66434137	chr2:66434137:G:A	rs192914082	G	A	G	Sox2_MA0143.3	7	1	-	9.206767037375712	9.800647049772198	CCTTTGTC
chr2	66497929	66497930	chr2:66497930:T:C	rs62144050	T	C	T	Sox2_MA0143.3	3	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr2	66497937	66497938	chr2:66497938:C:G	rs12995572	C	G	C	Sox2_MA0143.3	11	0	+	0	0	.
chr2	66573434	66573435	chr2:66573435:C:T	rs72897246	C	T	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr2	66585759	66585760	chr2:66585760:G:A	rs17032269	G	A	A	Sox2_MA0143.3	8	0	-	0	0	.
chr2	66683285	66683286	chr2:66683286:T:C	rs17679655	T	C	C	Sox2_MA0143.3	26	0	-	0	0	.
chr2	66683303	66683304	chr2:66683304:T:G	rs17032428	T	G	T	Sox2_MA0143.3	8	0	-	0	0	.
chr2	66686891	66686892	chr2:66686892:G:A	rs17628565	G	A	A	Sox2_MA0143.3	7	1	+	8.864090315184848	3.5547341015215945	CCTTTGTG
chr2	66718259	66718260	chr2:66718260:T:G	rs6720542	T	G	T	Sox2_MA0143.3	-3	0	+	0	0	.
chr2	66960377	66960378	chr2:66960378:C:G	rs11126105	C	G	C	Sox2_MA0143.3	11	0	-	0	0	.
chr2	67180511	67180512	chr2:67180512:A:G	rs6744324	A	G	A	Sox2_MA0143.3	-3	0	+	0	0	.
chr2	67240705	67240706	chr2:67240706:A:G	rs6546289	A	G	G	Sox2_MA0143.3	9	0	+	0	0	.
chr2	67269303	67269304	chr2:67269304:G:A	rs2062203	G	A	G	Sox2_MA0143.3	0	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr2	67514637	67514638	chr2:67514638:T:G	rs79084309	T	G	T	Sox2_MA0143.3	3	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr2	67514659	67514660	chr2:67514660:C:T	rs1402440	C	T	C	Sox2_MA0143.3	25	0	+	0	0	.
chr2	67568067	67568068	chr2:67568068:G:A	rs2270342	G	A	G	Sox2_MA0143.3	0	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr2	67573099	67573100	chr2:67573100:G:A	rs6760771	G	A	G	Sox2_MA0143.3	0	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr2	67573132	67573133	chr2:67573133:G:C	rs13005138	G	C	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr2	67579645	67579646	chr2:67579646:G:T	rs10176335	G	T	G	Sox2_MA0143.3	11	0	-	0	0	.
chr2	67619360	67619361	chr2:67619361:T:G	rs369397681	T	G	T	Sox2_MA0143.3	23	0	-	0	0	.
chr2	67670575	67670576	chr2:67670576:C:T	rs12478802	C	T	T	Sox2_MA0143.3	21	0	-	0	0	.
chr2	67880170	67880171	chr2:67880171:C:T	rs76397327	C	T	C	Sox2_MA0143.3	15	0	-	0	0	.
chr2	67894202	67894203	chr2:67894203:G:A	rs1976469	G	A	G	Sox2_MA0143.3	18	0	-	0	0	.
chr2	67917522	67917523	chr2:67917523:T:C	rs72900989	T	C	T	Sox2_MA0143.3	-19	0	-	0	0	.
chr2	67938063	67938064	chr2:67938064:A:G	rs6726612	A	G	A	Sox2_MA0143.3	12	0	+	0	0	.
chr2	68063165	68063166	chr2:68063166:A:G	chr2:68063166:A:G	A	G	A	Sox2_MA0143.3	-12	0	+	0	0	.
chr2	68253732	68253733	chr2:68253733:T:A	rs112731373	T	A	A	Sox2_MA0143.3	19	0	+	0	0	.
chr2	68375726	68375727	chr2:68375727:A:G	rs7605863	A	G	A	Sox2_MA0143.3	24	0	+	0	0	.
chr2	68394691	68394692	chr2:68394692:T:C	rs1155426	T	C	C	Sox2_MA0143.3	15	0	-	0	0	.
chr2	68394709	68394710	chr2:68394710:G:T	rs13010285	G	T	T	Sox2_MA0143.3	-3	0	-	0	0	.
chr2	68424267	68424268	chr2:68424268:T:C	rs7571403	T	C	C	Sox2_MA0143.3	2	1	-	9.613475778572903	3.494828071296623	CCATTGTT
chr2	68648198	68648199	chr2:68648199:A:G	rs147017338	A	G	A	Sox2_MA0143.3	3	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr2	68756335	68756336	chr2:68756336:A:T	rs10202051	A	T	T	Sox2_MA0143.3	8	0	-	0	0	.
chr2	68769656	68769657	chr2:68769657:G:T	rs6757505	G	T	T	Sox2_MA0143.3	-13	0	-	0	0	.
chr2	68806578	68806579	chr2:68806579:A:C	rs137975645	A	C	A	Sox2_MA0143.3	26	0	-	0	0	.
chr2	68806584	68806585	chr2:68806585:C:T	rs78196889	C	T	C	Sox2_MA0143.3	20	0	-	0	0	.
chr2	68818177	68818178	chr2:68818178:A:G	rs58475093	A	G	A	Sox2_MA0143.3	6	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr2	68854672	68854673	chr2:68854673:C:A	rs55797332	C	A	C	Sox2_MA0143.3	15	0	+	0	0	.
chr2	68880577	68880578	chr2:68880578:G:A	rs12987243	G	A	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr2	68889894	68889895	chr2:68889895:G:C	rs17569541	G	C	G	Sox2_MA0143.3	14	0	-	0	0	.
chr2	68943724	68943725	chr2:68943725:C:T	rs12620517	C	T	T	Sox2_MA0143.3	-5	0	+	0	0	.
chr2	68973706	68973707	chr2:68973707:C:T	rs80248075	C	T	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr2	68979104	68979105	chr2:68979105:G:A	rs13427279	G	A	G	Sox2_MA0143.3	-3	0	-	0	0	.
chr2	69012708	69012709	chr2:69012709:T:C	rs28365972	T	C	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr2	69012997	69012998	chr2:69012998:C:T	rs532221673	C	T	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr2	69046369	69046370	chr2:69046370:G:A	rs72895464	G	A	G	Sox2_MA0143.3	7	1	+	8.676919043985553	3.3675628303222993	CCATTGTG
chr2	69086296	69086297	chr2:69086297:G:A	rs13400665	G	A	G	Sox2_MA0143.3	7	1	-	9.206767037375712	9.800647049772198	CCTTTGTC
chr2	69087898	69087899	chr2:69087899:T:C	rs67487575	T	C	T	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr2	69088207	69088208	chr2:69088208:C:T	rs77719691	C	T	C	Sox2_MA0143.3	20	0	+	0	0	.
chr2	69090297	69090298	chr2:69090298:A:G	rs7586231	A	G	G	Sox2_MA0143.3	20	0	+	0	0	.
chr2	69157528	69157529	chr2:69157529:T:C	rs12713673	T	C	C	Sox2_MA0143.3	7	1	+	9.613475778572903	9.019595766176417	CCATTGTT
chr2	69160260	69160261	chr2:69160261:C:T	chr2:69160261:C:T	C	T	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr2	69178330	69178331	chr2:69178331:G:A	rs372455393	G	A	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr2	69216861	69216862	chr2:69216862:A:G	rs11692547	A	G	A	Sox2_MA0143.3	-15	0	+	0	0	.
chr2	69309850	69309851	chr2:69309851:G:A	rs79394687	G	A	G	Sox2_MA0143.3	26	0	+	0	0	.
chr2	69436172	69436173	chr2:69436173:G:A	rs4284873	G	A	g	Sox2_MA0143.3	0	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr2	69660886	69660887	chr2:69660887:G:A	rs1396800	G	A	A	Sox2_MA0143.3	10	0	-	0	0	.
chr2	69686069	69686070	chr2:69686070:G:A	rs72899494	G	A	A	Sox2_MA0143.3	-19	0	+	0	0	.
chr2	69701867	69701868	chr2:69701868:G:A	rs6724451	G	A	G	Sox2_MA0143.3	16	0	+	0	0	.
chr2	69766139	69766140	chr2:69766140:A:G	rs112726493	A	G	A	Sox2_MA0143.3	-2	0	-	0	0	.
chr2	69782818	69782819	chr2:69782819:C:T	rs6745943	C	T	C	Sox2_MA0143.3	19	0	+	0	0	.
chr2	69802177	69802178	chr2:69802178:A:G	rs3771542	A	G	G	Sox2_MA0143.3	26	0	+	0	0	.
chr2	69829402	69829403	chr2:69829403:G:A	rs182460622	G	A	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr2	69936301	69936302	chr2:69936302:T:G	rs11126251	T	G	G	Sox2_MA0143.3	6	1	+	8.676919043985553	1.7681642646703326	CCATTGTG
chr2	69954185	69954186	chr2:69954186:T:G	rs11126253	T	G	T	Sox2_MA0143.3	27	0	+	0	0	.
chr2	70010528	70010529	chr2:70010529:C:A	rs566763749	C	A	C	Sox2_MA0143.3	16	0	-	0	0	.
chr2	70095236	70095237	chr2:70095237:G:A	rs148323980	G	A	G	Sox2_MA0143.3	-5	0	+	0	0	.
chr2	70123261	70123262	chr2:70123262:C:A	rs115564003	C	A	C	Sox2_MA0143.3	17	0	-	0	0	.
chr2	70123281	70123282	chr2:70123282:A:G	rs368646911	A	G	A	Sox2_MA0143.3	-3	0	-	0	0	.
chr2	70123291	70123292	chr2:70123292:C:T	rs555244635	C	T	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr2	70123497	70123498	chr2:70123498:G:T	rs537659815	G	T	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr2	70142021	70142022	chr2:70142022:A:C	rs11692018	A	C	C	Sox2_MA0143.3	10	0	-	0	0	.
chr2	70143279	70143280	chr2:70143280:T:C	rs61406309	T	C	T	Sox2_MA0143.3	25	0	-	0	0	.
chr2	70144896	70144897	chr2:70144897:G:A	rs6720799	G	A	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr2	70491887	70491888	chr2:70491888:C:G	rs3755380	C	G	G	Sox2_MA0143.3	19	0	-	0	0	.
chr2	70641017	70641018	chr2:70641018:C:G	rs17697491	C	G	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr2	70641646	70641647	chr2:70641647:C:T	rs4852692	C	T	T	Sox2_MA0143.3	22	0	+	0	0	.
chr2	70667368	70667369	chr2:70667369:C:A	rs75880195	C	A	C	Sox2_MA0143.3	5	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr2	70675369	70675370	chr2:70675370:C:T	rs75139347	C	T	C	Sox2_MA0143.3	5	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr2	70695454	70695455	chr2:70695455:C:A	rs113441954	C	A	C	Sox2_MA0143.3	27	0	+	0	0	.
chr2	70704206	70704207	chr2:70704207:G:A	rs2287095	G	A	A	Sox2_MA0143.3	1	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr2	70738025	70738026	chr2:70738026:A:C	rs4852705	A	C	C	Sox2_MA0143.3	3	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr2	70752057	70752058	chr2:70752058:G:A	rs17717177	G	A	G	Sox2_MA0143.3	14	0	+	0	0	.
chr2	70854736	70854737	chr2:70854737:C:T	rs11688317	C	T	C	Sox2_MA0143.3	8	0	-	0	0	.
chr2	70919943	70919944	chr2:70919944:G:C	rs782308037	G	C	G	Sox2_MA0143.3	5	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr2	70919954	70919955	chr2:70919955:A:G	chr2:70919955:A:G	A	G	A	Sox2_MA0143.3	16	0	+	0	0	.
chr2	70919961	70919962	chr2:70919962:A:C	chr2:70919962:A:C	A	C	A	Sox2_MA0143.3	23	0	+	0	0	.
chr2	70978110	70978111	chr2:70978111:C:T	rs72897993	C	T	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr2	70978176	70978177	chr2:70978177:T:C	rs73937092	T	C	T	Sox2_MA0143.3	-5	0	-	0	0	.
chr2	71128480	71128481	chr2:71128481:A:C	rs112553984	A	C	.	Sox2_MA0143.3	24	0	-	0	0	.
chr2	71150499	71150500	chr2:71150500:A:T	rs357742	A	T	.	Sox2_MA0143.3	17	0	-	0	0	.
chr2	71155189	71155190	chr2:71155190:G:T	rs142152301	G	T	.	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr2	71244325	71244326	chr2:71244326:T:C	rs1870385	T	C	T	Sox2_MA0143.3	-14	0	-	0	0	.
chr2	71467048	71467049	chr2:71467049:C:A	rs1215974697	C	A	C	Sox2_MA0143.3	0	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr2	71482937	71482938	chr2:71482938:G:T	rs10187354	G	T	G	Sox2_MA0143.3	27	0	+	0	0	.
chr2	71506185	71506186	chr2:71506186:G:A	rs11681784	G	A	G	Sox2_MA0143.3	20	0	-	0	0	.
chr2	71506451	71506452	chr2:71506452:C:T	rs12469262	C	T	C	Sox2_MA0143.3	5	1	-	9.019595766176417	2.110840986861197	CCATTGTC
chr2	71549518	71549519	chr2:71549519:T:G	rs114007258	T	G	T	Sox2_MA0143.3	-1	0	-	0	0	.
chr2	71668130	71668131	chr2:71668131:G:C	rs17430216	G	C	G	Sox2_MA0143.3	-14	0	+	0	0	.
chr2	71693516	71693517	chr2:71693517:A:G	rs2114810	A	G	G	Sox2_MA0143.3	6	1	-	8.676919043985553	1.7681642646703326	CCATTGTG
chr2	71695970	71695971	chr2:71695971:T:C	rs10176088	T	C	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr2	71695991	71695992	chr2:71695992:A:G	rs144016609	A	G	A	Sox2_MA0143.3	2	1	+	8.676919043985553	2.5582713367092715	CCATTGTG
chr2	71696003	71696004	chr2:71696004:T:C	rs115776595	T	C	T	Sox2_MA0143.3	14	0	+	0	0	.
chr2	71778454	71778455	chr2:71778455:C:T	rs6754058	C	T	C	Sox2_MA0143.3	27	0	-	0	0	.
chr2	71806516	71806517	chr2:71806517:T:C	rs6725219	T	C	T	Sox2_MA0143.3	16	0	-	0	0	.
chr2	71858882	71858883	chr2:71858883:T:G	rs56173451	T	G	T	Sox2_MA0143.3	3	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr2	71863880	71863881	chr2:71863881:C:T	rs7584979	C	T	C	Sox2_MA0143.3	20	0	+	0	0	.
chr2	71907698	71907699	chr2:71907699:C:T	rs11695632	C	T	C	Sox2_MA0143.3	1	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr2	71940005	71940006	chr2:71940006:T:C	rs12052842	T	C	T	Sox2_MA0143.3	12	0	+	0	0	.
chr2	71992345	71992346	chr2:71992346:C:A	rs17007663	C	A	C	Sox2_MA0143.3	15	0	-	0	0	.
chr2	72007927	72007928	chr2:72007928:T:C	rs3860462	T	C	C	Sox2_MA0143.3	25	0	+	0	0	.
chr2	72161219	72161220	chr2:72161220:T:G	rs56775600	T	G	G	Sox2_MA0143.3	8	0	-	0	0	.
chr2	72182667	72182668	chr2:72182668:C:T	rs142375515	C	T	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr2	72292672	72292673	chr2:72292673:C:T	rs62149275	C	T	C	Sox2_MA0143.3	15	0	+	0	0	.
chr2	72539268	72539269	chr2:72539269:C:G	chr2:72539269:C:G	C	G	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr2	72539354	72539355	chr2:72539355:T:C	rs77980675	T	C	T	Sox2_MA0143.3	17	0	-	0	0	.
chr2	72762528	72762529	chr2:72762529:G:A	rs35666345	G	A	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr2	72859640	72859641	chr2:72859641:T:C	rs12479094	T	C	T	Sox2_MA0143.3	16	0	+	0	0	.
chr2	72862605	72862606	chr2:72862606:C:G	rs139917073	C	G	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr2	72862871	72862872	chr2:72862872:A:G	rs4852902	A	G	G	Sox2_MA0143.3	27	0	-	0	0	.
chr2	72862897	72862898	chr2:72862898:G:A	rs759054229	G	A	G	Sox2_MA0143.3	1	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr2	73044697	73044698	chr2:73044698:G:A	rs112256271	G	A	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr2	73214077	73214078	chr2:73214078:C:T	rs116572706	C	T	C	Sox2_MA0143.3	19	0	-	0	0	.
chr2	73727997	73727998	chr2:73727998:G:C	rs35528262	G	C	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr2	73746749	73746750	chr2:73746750:A:G	rs11126416	A	G	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr2	73890402	73890403	chr2:73890403:C:G	rs7600291	C	G	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr2	73908252	73908253	chr2:73908253:G:A	rs756127	G	A	G	Sox2_MA0143.3	12	0	+	0	0	.
chr2	73985401	73985402	chr2:73985402:C:G	rs191976078	C	G	-	Sox2_MA0143.3	-3	0	-	0	0	.
chr2	74011421	74011422	chr2:74011422:A:G	rs78591423	A	G	A	Sox2_MA0143.3	-13	0	-	0	0	.
chr2	74195066	74195067	chr2:74195067:T:A	rs828858	T	A	T	Sox2_MA0143.3	24	0	+	0	0	.
chr2	74288030	74288031	chr2:74288031:G:A	rs7560244	G	A	G	Sox2_MA0143.3	14	0	-	0	0	.
chr2	74350129	74350130	chr2:74350130:A:C	chr2:74350130:A:C	A	C	A	Sox2_MA0143.3	-19	0	-	0	0	.
chr2	74425728	74425729	chr2:74425729:G:C	rs199822193	G	C	G	Sox2_MA0143.3	14	0	+	0	0	.
chr2	74587870	74587871	chr2:74587871:A:G	rs74662947	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr2	74587885	74587886	chr2:74587886:G:A	chr2:74587886:G:A	G	A	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr2	74620327	74620328	chr2:74620328:A:G	rs363697	A	G	A	Sox2_MA0143.3	-5	0	-	0	0	.
chr2	74682637	74682638	chr2:74682638:T:C	rs6716578	T	C	T	Sox2_MA0143.3	26	0	+	0	0	.
chr2	74693843	74693844	chr2:74693844:G:A	rs205646	G	A	A	Sox2_MA0143.3	25	0	+	0	0	.
chr2	74875048	74875049	chr2:74875049:A:G	rs1869340	A	G	A	Sox2_MA0143.3	-18	0	+	0	0	.
chr2	74908991	74908992	chr2:74908992:G:A	chr2:74908992:G:A	G	A	G	Sox2_MA0143.3	17	0	-	0	0	.
chr2	74908994	74908995	chr2:74908995:T:C	rs140431886	T	C	T	Sox2_MA0143.3	14	0	-	0	0	.
chr2	74935081	74935082	chr2:74935082:C:G	rs11904112	C	G	G	Sox2_MA0143.3	15	0	+	0	0	.
chr2	75021772	75021773	chr2:75021773:C:T	rs116631008	C	T	C	Sox2_MA0143.3	7	1	+	9.019595766176417	9.613475778572903	CCATTGTC
chr2	75021782	75021783	chr2:75021783:A:G	rs112349432	A	G	A	Sox2_MA0143.3	17	0	+	0	0	.
chr2	75056664	75056665	chr2:75056665:C:G	rs17010702	C	G	C	Sox2_MA0143.3	0	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr2	75224696	75224697	chr2:75224697:G:T	rs7598278	G	T	T	Sox2_MA0143.3	27	0	+	0	0	.
chr2	75247167	75247168	chr2:75247168:T:A	rs17010950	T	A	T	Sox2_MA0143.3	-18	0	+	0	0	.
chr2	75292985	75292986	chr2:75292986:C:T	rs28535423	C	T	C	Sox2_MA0143.3	22	0	-	0	0	.
chr2	75312305	75312306	chr2:75312306:A:T	rs6749175	A	T	A	Sox2_MA0143.3	-2	0	+	0	0	.
chr2	75335372	75335373	chr2:75335373:C:T	rs11681817	C	T	C	Sox2_MA0143.3	-5	0	-	0	0	.
chr2	75336289	75336290	chr2:75336290:T:C	rs76714847	T	C	T	Sox2_MA0143.3	22	0	+	0	0	.
chr2	75425325	75425326	chr2:75425326:T:C	rs6708385	T	C	C	Sox2_MA0143.3	-12	0	-	0	0	.
chr2	75439513	75439514	chr2:75439514:C:T	rs11889063	C	T	T	Sox2_MA0143.3	18	0	-	0	0	.
chr2	75466842	75466843	chr2:75466843:T:C	rs113140356	T	C	T	Sox2_MA0143.3	-2	0	+	0	0	.
chr2	75569823	75569824	chr2:75569824:C:T	rs17677380	C	T	C	Sox2_MA0143.3	-5	0	-	0	0	.
chr2	75606390	75606391	chr2:75606391:C:T	rs35644534	C	T	C	Sox2_MA0143.3	19	0	-	0	0	.
chr2	75921178	75921179	chr2:75921179:T:C	rs80307277	T	C	T	Sox2_MA0143.3	23	0	-	0	0	.
chr2	75921213	75921214	chr2:75921214:A:G	rs60108883	A	G	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr2	75921501	75921502	chr2:75921502:C:G	rs10193720	C	G	C	Sox2_MA0143.3	21	0	+	0	0	.
chr2	75946424	75946425	chr2:75946425:C:A	chr2:75946425:C:A	C	A	C	Sox2_MA0143.3	15	0	+	0	0	.
chr2	75960269	75960270	chr2:75960270:G:A	rs73936872	G	A	A	Sox2_MA0143.3	-11	0	+	0	0	.
chr2	76009731	76009732	chr2:76009732:T:C	rs17012004	T	C	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr2	76088678	76088679	chr2:76088679:T:C	rs375530	T	C	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr2	76129225	76129226	chr2:76129226:C:T	rs35191290	C	T	T	Sox2_MA0143.3	-11	0	-	0	0	.
chr2	76162208	76162209	chr2:76162209:A:G	rs35787624	A	G	A	Sox2_MA0143.3	-3	0	-	0	0	.
chr2	76203579	76203580	chr2:76203580:T:C	rs1404088	T	C	C	Sox2_MA0143.3	9	0	+	0	0	.
chr2	76295336	76295337	chr2:76295337:G:A	rs13397174	G	A	A	Sox2_MA0143.3	12	0	-	0	0	.
chr2	76403309	76403310	chr2:76403310:C:T	rs11683883	C	T	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr2	76406373	76406374	chr2:76406374:C:T	rs148180302	C	T	C	Sox2_MA0143.3	21	0	-	0	0	.
chr2	76406404	76406405	chr2:76406405:C:G	rs1519894	C	G	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr2	76421866	76421867	chr2:76421867:T:C	rs12614728	T	C	T	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr2	76421911	76421912	chr2:76421912:C:A	rs1607639	C	A	C	Sox2_MA0143.3	17	0	+	0	0	.
chr2	76478939	76478940	chr2:76478940:A:G	rs6745935	A	G	A	Sox2_MA0143.3	-20	0	+	0	0	.
chr2	76584711	76584712	chr2:76584712:A:C	rs72913709	A	C	A	Sox2_MA0143.3	-6	0	+	0	0	.
chr2	76811330	76811331	chr2:76811331:A:T	rs6547100	A	T	T	Sox2_MA0143.3	20	0	+	0	0	.
chr2	77035840	77035841	chr2:77035841:C:T	rs1446693	C	T	T	Sox2_MA0143.3	7	1	-	8.676919043985553	3.3675628303222993	CCATTGTG
chr2	77085976	77085977	chr2:77085977:A:G	rs73940295	A	G	A	Sox2_MA0143.3	-7	0	-	0	0	.
chr2	77320090	77320091	chr2:77320091:G:C	rs558881992	G	C	G	Sox2_MA0143.3	16	0	+	0	0	.
chr2	77385408	77385409	chr2:77385409:G:A	rs415838	G	A	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr2	77514755	77514756	chr2:77514756:C:T	rs66637022	C	T	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr2	78146296	78146297	chr2:78146297:G:A	rs146570757	G	A	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr2	78330344	78330345	chr2:78330345:C:T	rs941019	C	T	T	Sox2_MA0143.3	1	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr2	78546938	78546939	chr2:78546939:C:G	rs116358403	C	G	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr2	78788083	78788084	chr2:78788084:C:T	rs138489660	C	T	C	Sox2_MA0143.3	24	0	-	0	0	.
chr2	78812228	78812229	chr2:78812229:G:A	rs896530	G	A	A	Sox2_MA0143.3	5	1	+	9.206767037375712	2.298012258060492	CCTTTGTC
chr2	78910329	78910330	chr2:78910330:G:T	rs536095364	G	T	G	Sox2_MA0143.3	10	0	+	0	0	.
chr2	78910339	78910340	chr2:78910340:C:T	rs190836649	C	T	C	Sox2_MA0143.3	20	0	+	0	0	.
chr2	78967541	78967542	chr2:78967542:C:G	rs11693972	C	G	C	Sox2_MA0143.3	27	0	+	0	0	.
chr2	78977868	78977869	chr2:78977869:G:T	chr2:78977869:G:T	G	T	G	Sox2_MA0143.3	5	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr2	78977876	78977877	chr2:78977877:G:A	rs79012270	G	A	G	Sox2_MA0143.3	13	0	+	0	0	.
chr2	78978545	78978546	chr2:78978546:T:C	rs12618775	T	C	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr2	78979843	78979844	chr2:78979844:T:C	rs541407576	T	C	T	Sox2_MA0143.3	14	0	-	0	0	.
chr2	79010491	79010492	chr2:79010492:G:A	rs895757	G	A	A	Sox2_MA0143.3	12	0	-	0	0	.
chr2	79084358	79084359	chr2:79084359:A:C	rs7609379	A	C	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr2	79261573	79261574	chr2:79261574:C:G	rs1434183	C	G	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr2	79716512	79716513	chr2:79716513:G:A	rs78743945	G	A	G	Sox2_MA0143.3	18	0	+	0	0	.
chr2	79717560	79717561	chr2:79717561:A:G	rs74441130	A	G	A	Sox2_MA0143.3	-15	0	+	0	0	.
chr2	79717592	79717593	chr2:79717593:C:T	rs17017693	C	T	C	Sox2_MA0143.3	17	0	+	0	0	.
chr2	79789391	79789392	chr2:79789392:A:G	rs7599937	A	G	G	Sox2_MA0143.3	24	0	-	0	0	.
chr2	79790404	79790405	chr2:79790405:G:T	rs12996687	G	T	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr2	79901726	79901727	chr2:79901727:A:G	rs74670716	A	G	A	Sox2_MA0143.3	-5	0	+	0	0	.
chr2	79946266	79946267	chr2:79946267:T:C	rs10208230	T	C	T	Sox2_MA0143.3	15	0	-	0	0	.
chr2	80012092	80012093	chr2:80012093:G:A	rs378633	G	A	G	Sox2_MA0143.3	-14	0	+	0	0	.
chr2	80091314	80091315	chr2:80091315:A:G	rs59802931	A	G	A	Sox2_MA0143.3	2	1	+	9.019595766176417	2.900948058900136	CCATTGTC
chr2	80255868	80255869	chr2:80255869:C:T	rs116064249	C	T	C	Sox2_MA0143.3	18	0	+	0	0	.
chr2	80460185	80460186	chr2:80460186:C:G	rs60145087	C	G	C	Sox2_MA0143.3	8	0	+	0	0	.
chr2	80568314	80568315	chr2:80568315:G:A	rs3770322	G	A	G	Sox2_MA0143.3	21	0	-	0	0	.
chr2	80589281	80589282	chr2:80589282:G:A	rs771466133	G	A	G	Sox2_MA0143.3	20	0	+	0	0	.
chr2	80590023	80590024	chr2:80590024:A:G	rs2287514	A	G	A	Sox2_MA0143.3	2	1	+	9.613475778572903	3.494828071296623	CCATTGTT
chr2	80688356	80688357	chr2:80688357:A:G	rs4852590	A	G	A	Sox2_MA0143.3	-14	0	+	0	0	.
chr2	80757655	80757656	chr2:80757656:G:A	rs6547330	G	A	G	Sox2_MA0143.3	11	0	-	0	0	.
chr2	80887965	80887966	chr2:80887966:G:A	chr2:80887966:G:A	G	A	G	Sox2_MA0143.3	18	0	-	0	0	.
chr2	80926528	80926529	chr2:80926529:T:G	rs1907778	T	G	T	Sox2_MA0143.3	3	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr2	81075978	81075979	chr2:81075979:G:A	rs2862439	G	A	G	Sox2_MA0143.3	12	0	+	0	0	.
chr2	81324315	81324316	chr2:81324316:G:A	rs75588823	G	A	G	Sox2_MA0143.3	25	0	-	0	0	.
chr2	82093302	82093303	chr2:82093303:A:G	rs2902297	A	G	G	Sox2_MA0143.3	21	0	-	0	0	.
chr2	82998113	82998114	chr2:82998114:G:C	rs17022913	G	C	G	Sox2_MA0143.3	-9	0	+	0	0	.
chr2	83055131	83055132	chr2:83055132:C:T	rs2863064	C	T	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr2	83055553	83055554	chr2:83055554:C:T	rs114409075	C	T	C	Sox2_MA0143.3	0	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr2	83069998	83069999	chr2:83069999:T:A	rs79895895	T	A	T	Sox2_MA0143.3	-20	0	+	0	0	.
chr2	83209870	83209871	chr2:83209871:A:G	rs6737504	A	G	A	Sox2_MA0143.3	-10	0	-	0	0	.
chr2	83283286	83283287	chr2:83283287:G:T	rs6723476	G	T	T	Sox2_MA0143.3	21	0	+	0	0	.
chr2	83283742	83283743	chr2:83283743:A:C	rs6547477	A	C	A	Sox2_MA0143.3	4	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr2	83565568	83565569	chr2:83565569:A:G	rs75696535	A	G	A	Sox2_MA0143.3	-2	0	-	0	0	.
chr2	83808468	83808469	chr2:83808469:T:C	rs10180201	T	C	T	Sox2_MA0143.3	-11	0	-	0	0	.
chr2	84303066	84303067	chr2:84303067:C:A	rs11893126	C	A	A	Sox2_MA0143.3	-7	0	-	0	0	.
chr2	84317507	84317508	chr2:84317508:T:C	rs10209961	T	C	T	Sox2_MA0143.3	-6	0	-	0	0	.
chr2	84373645	84373646	chr2:84373646:A:G	rs1455003	A	G	a	Sox2_MA0143.3	-8	0	+	0	0	.
chr2	84674992	84674993	chr2:84674993:C:T	rs13407694	C	T	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr2	84677922	84677923	chr2:84677923:T:C	chr2:84677923:T:C	T	C	T	Sox2_MA0143.3	-1	0	-	0	0	.
chr2	84763532	84763533	chr2:84763533:A:G	rs12471680	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr2	84780033	84780034	chr2:84780034:G:T	rs1192377	G	T	T	Sox2_MA0143.3	10	0	+	0	0	.
chr2	84823363	84823364	chr2:84823364:G:A	rs11674022	G	A	A	Sox2_MA0143.3	21	0	-	0	0	.
chr2	84888746	84888747	chr2:84888747:A:T	rs917466985	A	T	A	Sox2_MA0143.3	6	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr2	84907097	84907098	chr2:84907098:G:T	chr2:84907098:G:T	G	T	g	Sox2_MA0143.3	17	0	-	0	0	.
chr2	84908874	84908875	chr2:84908875:G:A	rs7562211	G	A	g	Sox2_MA0143.3	-16	0	-	0	0	.
chr2	84916281	84916282	chr2:84916282:A:T	rs9678007	A	T	a	Sox2_MA0143.3	17	0	+	0	0	.
chr2	84924998	84924999	chr2:84924999:C:T	rs891087772	C	T	c	Sox2_MA0143.3	-18	0	-	0	0	.
chr2	84939786	84939787	chr2:84939787:G:C	chr2:84939787:G:C	G	C	g	Sox2_MA0143.3	-14	0	+	0	0	.
chr2	85133977	85133978	chr2:85133978:T:C	chr2:85133978:T:C	T	C	T	Sox2_MA0143.3	-18	0	+	0	0	.
chr2	85133977	85133978	chr2:85133978:T:G	rs116356120	T	G	T	Sox2_MA0143.3	-18	0	+	0	0	.
chr2	85244335	85244336	chr2:85244336:T:C	rs7566763	T	C	T	Sox2_MA0143.3	22	0	+	0	0	.
chr2	85266595	85266596	chr2:85266596:C:T	rs181559208	C	T	C	Sox2_MA0143.3	1	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr2	85266605	85266606	chr2:85266606:C:T	rs111242271	C	T	C	Sox2_MA0143.3	11	0	+	0	0	.
chr2	85277580	85277581	chr2:85277581:G:A	rs908300	G	A	G	Sox2_MA0143.3	-3	0	+	0	0	.
chr2	85315041	85315042	chr2:85315042:C:T	rs111484718	C	T	C	Sox2_MA0143.3	7	1	-	8.864090315184848	3.5547341015215945	CCTTTGTG
chr2	85437762	85437763	chr2:85437763:G:T	rs370196321	G	T	G	Sox2_MA0143.3	14	0	-	0	0	.
chr2	85455975	85455976	chr2:85455976:G:A	rs17026352	G	A	G	Sox2_MA0143.3	1	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr2	85501484	85501485	chr2:85501485:T:C	rs77427278	T	C	T	Sox2_MA0143.3	10	0	-	0	0	.
chr2	85590619	85590620	chr2:85590620:G:A	rs77946478	G	A	G	Sox2_MA0143.3	13	0	-	0	0	.
chr2	85663169	85663170	chr2:85663170:T:C	rs2118177	T	C	C	Sox2_MA0143.3	26	0	+	0	0	.
chr2	85731691	85731692	chr2:85731692:C:T	rs77910984	C	T	C	Sox2_MA0143.3	0	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr2	85750813	85750814	chr2:85750814:G:A	rs115090099	G	A	G	Sox2_MA0143.3	27	0	-	0	0	.
chr2	85765579	85765580	chr2:85765580:C:T	rs115153832	C	T	C	Sox2_MA0143.3	11	0	-	0	0	.
chr2	85765953	85765954	chr2:85765954:T:C	rs12475263	T	C	T	Sox2_MA0143.3	20	0	+	0	0	.
chr2	85778426	85778427	chr2:85778427:G:A	rs10192235	G	A	G	Sox2_MA0143.3	1	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr2	85810791	85810792	chr2:85810792:C:T	rs78862122	C	T	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr2	85828822	85828823	chr2:85828823:C:T	rs17431365	C	T	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr2	85859272	85859273	chr2:85859273:G:C	rs12478916	G	C	G	Sox2_MA0143.3	19	0	-	0	0	.
chr2	85872182	85872183	chr2:85872183:C:T	rs186403770	C	T	T	Sox2_MA0143.3	-13	0	-	0	0	.
chr2	85916019	85916020	chr2:85916020:C:T	rs2577786	C	T	C	Sox2_MA0143.3	18	0	-	0	0	.
chr2	85926731	85926732	chr2:85926732:C:T	rs2164878	C	T	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr2	85930604	85930605	chr2:85930605:C:T	rs12616165	C	T	C	Sox2_MA0143.3	-5	0	-	0	0	.
chr2	85942828	85942829	chr2:85942829:T:C	rs2366957	T	C	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr2	85942865	85942866	chr2:85942866:T:C	rs2366958	T	C	T	Sox2_MA0143.3	21	0	+	0	0	.
chr2	85944039	85944040	chr2:85944040:G:T	rs57339071	G	T	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr2	86026457	86026458	chr2:86026458:T:C	rs10173155	T	C	C	Sox2_MA0143.3	8	0	+	0	0	.
chr2	86036675	86036676	chr2:86036676:G:A	rs529184671	G	A	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr2	86062312	86062313	chr2:86062313:C:T	rs59947468	C	T	T	Sox2_MA0143.3	20	0	-	0	0	.
chr2	86135950	86135951	chr2:86135951:A:G	rs3770069	A	G	a	Sox2_MA0143.3	12	0	+	0	0	.
chr2	86172760	86172761	chr2:86172761:T:G	rs7609008	T	G	T	Sox2_MA0143.3	14	0	+	0	0	.
chr2	86195251	86195252	chr2:86195252:G:A	rs78761588	G	A	G	Sox2_MA0143.3	14	0	+	0	0	.
chr2	86195895	86195896	chr2:86195896:C:T	rs4422155	C	T	T	Sox2_MA0143.3	23	0	+	0	0	.
chr2	86327501	86327502	chr2:86327502:C:G	rs11127029	C	G	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr2	86331623	86331624	chr2:86331624:G:C	rs80252539	G	C	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr2	86339137	86339138	chr2:86339138:G:T	rs11883808	G	T	g	Sox2_MA0143.3	1	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr2	86413603	86413604	chr2:86413604:A:G	rs6737677	A	G	A	Sox2_MA0143.3	-18	0	-	0	0	.
chr2	86481688	86481689	chr2:86481689:T:G	rs556629598	T	G	T	Sox2_MA0143.3	23	0	-	0	0	.
chr2	86735119	86735120	chr2:86735120:C:A	rs1380531330	C	A	C	Sox2_MA0143.3	11	0	+	0	0	.
chr2	86785582	86785583	chr2:86785583:C:T	rs7563485	C	T	T	Sox2_MA0143.3	11	0	+	0	0	.
chr2	86793877	86793878	chr2:86793878:G:A	rs4366909	G	A	G	Sox2_MA0143.3	-3	0	+	0	0	.
chr2	86815701	86815702	chr2:86815702:T:C	rs35555413	T	C	T	Sox2_MA0143.3	-10	0	-	0	0	.
chr2	86829681	86829682	chr2:86829682:A:G	rs4240205	A	G	g	Sox2_MA0143.3	-9	0	+	0	0	.
chr2	87076937	87076938	chr2:87076938:A:G	rs139242763	A	G	.	Sox2_MA0143.3	3	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr2	87076952	87076953	chr2:87076953:T:C	rs1379529527	T	C	.	Sox2_MA0143.3	-12	0	-	0	0	.
chr2	87284278	87284279	chr2:87284279:A:G	rs6757497	A	G	A	Sox2_MA0143.3	20	0	+	0	0	.
chr2	87312650	87312651	chr2:87312651:C:T	rs115112383	C	T	C	Sox2_MA0143.3	9	0	+	0	0	.
chr2	88014825	88014826	chr2:88014826:G:A	rs6748129	G	A	G	Sox2_MA0143.3	-5	0	+	0	0	.
chr2	88014851	88014852	chr2:88014852:T:C	rs77467917	T	C	T	Sox2_MA0143.3	21	0	+	0	0	.
chr2	88092498	88092499	chr2:88092499:C:T	rs10170645	C	T	C	Sox2_MA0143.3	9	0	-	0	0	.
chr2	88095254	88095255	chr2:88095255:G:C	rs2919884	G	C	G	Sox2_MA0143.3	15	0	-	0	0	.
chr2	88130071	88130072	chr2:88130072:T:C	rs2970903	T	C	T	Sox2_MA0143.3	-16	0	+	0	0	.
chr2	88209801	88209802	chr2:88209802:T:C	rs13019346	T	C	T	Sox2_MA0143.3	23	0	-	0	0	.
chr2	88222900	88222901	chr2:88222901:C:T	rs12997713	C	T	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr2	88439197	88439198	chr2:88439198:C:T	rs543702393	C	T	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr2	88443822	88443823	chr2:88443823:G:T	rs528027498	G	T	G	Sox2_MA0143.3	17	0	-	0	0	.
chr2	88629357	88629358	chr2:88629358:G:T	rs7605713	G	T	T	Sox2_MA0143.3	-10	0	+	0	0	.
chr2	88654927	88654928	chr2:88654928:G:T	rs112557984	G	T	G	Sox2_MA0143.3	0	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr2	88654947	88654948	chr2:88654948:A:C	rs931806558	A	C	A	Sox2_MA0143.3	-20	0	-	0	0	.
chr2	88698747	88698748	chr2:88698748:T:C	rs17037571	T	C	N	Sox2_MA0143.3	-15	0	+	0	0	.
chr2	88740236	88740237	chr2:88740237:G:A	rs73954322	G	A	a	Sox2_MA0143.3	-12	0	+	0	0	.
chr2	88740267	88740268	chr2:88740268:C:T	rs114281451	C	T	c	Sox2_MA0143.3	19	0	+	0	0	.
chr2	88855533	88855534	chr2:88855534:T:G	rs232233	T	G	T	Sox2_MA0143.3	-4	0	-	0	0	.
chr2	88866080	88866081	chr2:88866081:T:C	rs534680194	T	C	t	Sox2_MA0143.3	26	0	+	0	0	.
chr2	88880720	88880721	chr2:88880721:G:C	rs115374471	G	C	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr2	89205278	89205279	chr2:89205279:A:G	rs182569410	A	G	a	Sox2_MA0143.3	2	1	+	9.613475778572903	3.494828071296623	CCATTGTT
chr2	89765330	89765331	chr2:89765331:C:A	rs1352343285	C	A	.	Sox2_MA0143.3	-1	0	-	0	0	.
chr2	89767185	89767186	chr2:89767186:C:A	rs71235047	C	A	.	Sox2_MA0143.3	5	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr2	89767191	89767192	chr2:89767192:G:T	rs1245221516	G	T	.	Sox2_MA0143.3	-1	0	-	0	0	.
chr2	89767196	89767197	chr2:89767197:T:C	rs1340021919	T	C	.	Sox2_MA0143.3	-6	0	-	0	0	.
chr2	91445899	91445900	chr2:91445900:C:A	rs1195899071	C	A	c	Sox2_MA0143.3	15	0	-	0	0	.
chr2	91445961	91445962	chr2:91445962:T:C	rs490421	T	C	t	Sox2_MA0143.3	18	0	+	0	0	.
chr2	91590280	91590281	chr2:91590281:C:A	rs1478918713	C	A	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr2	91733884	91733885	chr2:91733885:C:T	rs79951632	C	T	.	Sox2_MA0143.3	-7	0	+	0	0	.
chr2	92072752	92072753	chr2:92072753:C:T	rs28429086	C	T	.	Sox2_MA0143.3	-2	0	+	0	0	.
chr2	94963292	94963293	chr2:94963293:T:G	rs10172167	T	G	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr2	95074354	95074355	chr2:95074355:T:G	rs7585473	T	G	G	Sox2_MA0143.3	4	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr2	95207558	95207559	chr2:95207559:C:G	rs531901186	C	G	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr2	95207573	95207574	chr2:95207574:C:T	rs560697301	C	T	C	Sox2_MA0143.3	1	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr2	95261640	95261641	chr2:95261641:G:C	rs76373641	G	C	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr2	95311163	95311164	chr2:95311164:C:T	rs11164122	C	T	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr2	95526877	95526878	chr2:95526878:G:A	rs112632507	G	A	g	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr2	95663838	95663839	chr2:95663839:C:G	rs180686549	C	G	.	Sox2_MA0143.3	-10	0	-	0	0	.
chr2	96131635	96131636	chr2:96131636:C:T	rs79380558	C	T	C	Sox2_MA0143.3	25	0	+	0	0	.
chr2	96209428	96209429	chr2:96209429:G:A	rs185981173	G	A	G	Sox2_MA0143.3	8	0	+	0	0	.
chr2	96215857	96215858	chr2:96215858:A:T	rs7579709	A	T	T	Sox2_MA0143.3	16	0	-	0	0	.
chr2	96374255	96374256	chr2:96374256:C:G	rs373331303	C	G	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr2	96394625	96394626	chr2:96394626:A:G	rs75247620	A	G	A	Sox2_MA0143.3	-4	0	+	0	0	.
chr2	96394627	96394628	chr2:96394628:G:A	rs62153922	G	A	G	Sox2_MA0143.3	-2	0	+	0	0	.
chr2	96857468	96857469	chr2:96857469:G:A	rs75285891	G	A	G	Sox2_MA0143.3	11	0	-	0	0	.
chr2	96867196	96867197	chr2:96867197:G:T	rs78257260	G	T	G	Sox2_MA0143.3	-16	0	-	0	0	.
chr2	96868961	96868962	chr2:96868962:A:T	rs986108969	A	T	A	Sox2_MA0143.3	14	0	-	0	0	.
chr2	96903381	96903382	chr2:96903382:C:T	rs62152902	C	T	C	Sox2_MA0143.3	9	0	+	0	0	.
chr2	96962493	96962494	chr2:96962494:C:T	rs4586672	C	T	T	Sox2_MA0143.3	5	1	-	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr2	96977838	96977839	chr2:96977839:T:C	rs1796048	T	C	T	Sox2_MA0143.3	19	0	+	0	0	.
chr2	97673216	97673217	chr2:97673217:C:T	rs115130079	C	T	c	Sox2_MA0143.3	13	0	+	0	0	.
chr2	97707025	97707026	chr2:97707026:G:A	rs879707399	G	A	G	Sox2_MA0143.3	7	1	-	9.019595766176417	9.613475778572903	CCATTGTC
chr2	97716394	97716395	chr2:97716395:G:A	rs72951131	G	A	A	Sox2_MA0143.3	-11	0	-	0	0	.
chr2	97767429	97767430	chr2:97767430:G:C	rs2121271	G	C	G	Sox2_MA0143.3	1	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr2	97931172	97931173	chr2:97931173:C:T	rs9784011	C	T	T	Sox2_MA0143.3	5	1	-	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr2	97993648	97993649	chr2:97993649:C:G	rs78806208	C	G	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr2	97993649	97993650	chr2:97993650:A:C	rs7578638	A	C	A	Sox2_MA0143.3	-16	0	-	0	0	.
chr2	98083424	98083425	chr2:98083425:C:T	rs6756742	C	T	C	Sox2_MA0143.3	1	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr2	98187850	98187851	chr2:98187851:G:A	rs1466156	G	A	G	Sox2_MA0143.3	0	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr2	98212454	98212455	chr2:98212455:T:C	rs17492872	T	C	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr2	98356836	98356837	chr2:98356837:A:C	rs62156295	A	C	-	Sox2_MA0143.3	-13	0	+	0	0	.
chr2	98373236	98373237	chr2:98373237:A:C	rs3769754	A	C	a	Sox2_MA0143.3	-5	0	-	0	0	.
chr2	98461836	98461837	chr2:98461837:G:A	rs76262293	G	A	G	Sox2_MA0143.3	13	0	+	0	0	.
chr2	98731453	98731454	chr2:98731454:G:A	rs7420869	G	A	G	Sox2_MA0143.3	23	0	-	0	0	.
chr2	98731456	98731457	chr2:98731457:C:A	rs369165851	C	A	C	Sox2_MA0143.3	20	0	-	0	0	.
chr2	98731467	98731468	chr2:98731468:C:T	chr2:98731468:C:T	C	T	C	Sox2_MA0143.3	9	0	-	0	0	.
chr2	98731479	98731480	chr2:98731480:C:T	rs141803663	C	T	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr2	98883848	98883849	chr2:98883849:C:T	rs113859496	C	T	C	Sox2_MA0143.3	5	1	-	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr2	98944943	98944944	chr2:98944944:G:A	rs781270342	G	A	.	Sox2_MA0143.3	-11	0	+	0	0	.
chr2	99178767	99178768	chr2:99178768:G:T	rs13000731	G	T	G	Sox2_MA0143.3	5	1	+	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr2	99326359	99326360	chr2:99326360:T:C	rs72954284	T	C	T	Sox2_MA0143.3	-20	0	-	0	0	.
chr2	99420129	99420130	chr2:99420130:G:T	rs17763718	G	T	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr2	99475162	99475163	chr2:99475163:G:C	rs6713792	G	C	C	Sox2_MA0143.3	9	0	-	0	0	.
chr2	99572418	99572419	chr2:99572419:C:T	rs150146115	C	T	C	Sox2_MA0143.3	10	0	+	0	0	.
chr2	99595419	99595420	chr2:99595420:A:G	rs4851213	A	G	G	Sox2_MA0143.3	12	0	+	0	0	.
chr2	99701873	99701874	chr2:99701874:G:A	rs55740634	G	A	A	Sox2_MA0143.3	19	0	-	0	0	.
chr2	99821903	99821904	chr2:99821904:G:C	rs116040282	G	C	G	Sox2_MA0143.3	12	0	-	0	0	.
chr2	99859748	99859749	chr2:99859749:T:C	rs17023236	T	C	T	Sox2_MA0143.3	24	0	+	0	0	.
chr2	100129255	100129256	chr2:100129256:C:T	rs72819180	C	T	C	Sox2_MA0143.3	14	0	-	0	0	.
chr2	100174118	100174119	chr2:100174119:C:T	rs10185510	C	T	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr2	100183178	100183179	chr2:100183179:C:G	rs112492763	C	G	C	Sox2_MA0143.3	19	0	+	0	0	.
chr2	100190051	100190052	chr2:100190052:T:C	rs6712515	T	C	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr2	100265988	100265989	chr2:100265989:C:T	rs12467008	C	T	T	Sox2_MA0143.3	-17	0	-	0	0	.
chr2	100291255	100291256	chr2:100291256:G:A	rs7575849	G	A	G	Sox2_MA0143.3	1	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr2	100291261	100291262	chr2:100291262:T:G	rs79560895	T	G	T	Sox2_MA0143.3	-5	0	-	0	0	.
chr2	100337728	100337729	chr2:100337729:C:A	rs4851299	C	A	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr2	100458861	100458862	chr2:100458862:G:C	rs58999675	G	C	G	Sox2_MA0143.3	-9	0	+	0	0	.
chr2	100580842	100580843	chr2:100580843:C:T	rs146710150	C	T	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr2	100606942	100606943	chr2:100606943:C:T	rs4851346	C	T	C	Sox2_MA0143.3	16	0	-	0	0	.
chr2	100619595	100619596	chr2:100619596:C:T	rs4851353	C	T	C	Sox2_MA0143.3	23	0	+	0	0	.
chr2	100630682	100630683	chr2:100630683:T:C	rs10191620	T	C	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr2	100631914	100631915	chr2:100631915:A:G	rs6738852	A	G	G	Sox2_MA0143.3	12	0	+	0	0	.
chr2	100644491	100644492	chr2:100644492:C:T	rs72971714	C	T	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr2	100645539	100645540	chr2:100645540:A:G	rs10153606	A	G	A	Sox2_MA0143.3	3	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr2	100742465	100742466	chr2:100742466:C:T	rs138056190	C	T	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr2	100742495	100742496	chr2:100742496:G:A	rs141733884	G	A	G	Sox2_MA0143.3	20	0	+	0	0	.
chr2	100754011	100754012	chr2:100754012:C:T	rs12465343	C	T	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr2	100755148	100755149	chr2:100755149:C:T	rs151220640	C	T	C	Sox2_MA0143.3	12	0	-	0	0	.
chr2	100796918	100796919	chr2:100796919:A:C	rs11694387	A	C	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr2	100853707	100853708	chr2:100853708:C:T	rs79277104	C	T	C	Sox2_MA0143.3	26	0	-	0	0	.
chr2	100925105	100925106	chr2:100925106:C:T	rs199718837	C	T	C	Sox2_MA0143.3	9	0	+	0	0	.
chr2	100969021	100969022	chr2:100969022:T:C	rs4851393	T	C	t	Sox2_MA0143.3	-2	0	+	0	0	.
chr2	101026380	101026381	chr2:101026381:G:T	rs12474501	G	T	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr2	101127824	101127825	chr2:101127825:G:A	rs1345034	G	A	G	Sox2_MA0143.3	-14	0	+	0	0	.
chr2	101152311	101152312	chr2:101152312:G:C	rs2241872	G	C	C	Sox2_MA0143.3	27	0	-	0	0	.
chr2	101152336	101152337	chr2:101152337:A:G	rs116791966	A	G	A	Sox2_MA0143.3	2	1	-	9.800647049772198	3.494828071296623	CCTTTGTT
chr2	101163151	101163152	chr2:101163152:C:T	rs34180737	C	T	C	Sox2_MA0143.3	11	0	-	0	0	.
chr2	101234382	101234383	chr2:101234383:C:T	rs1192801	C	T	T	Sox2_MA0143.3	-12	0	+	0	0	.
chr2	101246312	101246313	chr2:101246313:A:C	rs4850963	A	C	A	Sox2_MA0143.3	-9	0	+	0	0	.
chr2	101341832	101341833	chr2:101341833:G:A	rs4851422	G	A	A	Sox2_MA0143.3	-5	0	-	0	0	.
chr2	101412465	101412466	chr2:101412466:A:G	rs11686870	A	G	A	Sox2_MA0143.3	9	0	+	0	0	.
chr2	101415217	101415218	chr2:101415218:G:A	rs1107975	G	A	G	Sox2_MA0143.3	13	0	+	0	0	.
chr2	101446849	101446850	chr2:101446850:A:G	rs7587439	A	G	A	Sox2_MA0143.3	-19	0	-	0	0	.
chr2	101551553	101551554	chr2:101551554:T:C	rs6543074	T	C	C	Sox2_MA0143.3	20	0	-	0	0	.
chr2	101551945	101551946	chr2:101551946:A:C	rs6543075	A	C	A	Sox2_MA0143.3	4	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr2	101563049	101563050	chr2:101563050:A:G	rs17025806	A	G	G	Sox2_MA0143.3	13	0	-	0	0	.
chr2	101625574	101625575	chr2:101625575:T:C	rs115232861	T	C	T	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr2	101630573	101630574	chr2:101630574:G:C	rs906839	G	C	G	Sox2_MA0143.3	16	0	-	0	0	.
chr2	101679564	101679565	chr2:101679565:C:G	rs62155148	C	G	C	Sox2_MA0143.3	16	0	+	0	0	.
chr2	101679565	101679566	chr2:101679566:A:G	rs1025132399	A	G	A	Sox2_MA0143.3	17	0	+	0	0	.
chr2	101711196	101711197	chr2:101711197:A:T	rs62155716	A	T	A	Sox2_MA0143.3	23	0	-	0	0	.
chr2	101754955	101754956	chr2:101754956:T:C	chr2:101754956:T:C	T	C	T	Sox2_MA0143.3	-1	0	-	0	0	.
chr2	101763774	101763775	chr2:101763775:C:T	rs56336235	C	T	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr2	101767188	101767189	chr2:101767189:G:A	rs901815974	G	A	G	Sox2_MA0143.3	23	0	-	0	0	.
chr2	101767224	101767225	chr2:101767225:A:G	rs574182215	A	G	A	Sox2_MA0143.3	-13	0	-	0	0	.
chr2	101822373	101822374	chr2:101822374:A:T	rs875565	A	T	A	Sox2_MA0143.3	20	0	+	0	0	.
chr2	101966186	101966187	chr2:101966187:A:G	rs1005193	A	G	G	Sox2_MA0143.3	-9	0	+	0	0	.
chr2	102032796	102032797	chr2:102032797:C:T	rs570607897	C	T	c	Sox2_MA0143.3	-1	0	-	0	0	.
chr2	102094969	102094970	chr2:102094970:G:A	rs547119879	G	A	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr2	102102643	102102644	chr2:102102644:C:T	rs72996520	C	T	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr2	102261570	102261571	chr2:102261571:T:C	rs145536809	T	C	T	Sox2_MA0143.3	2	1	+	8.864090315184848	2.5582713367092715	CCTTTGTG
chr2	102419318	102419319	chr2:102419319:T:C	rs2293224	T	C	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr2	102500823	102500824	chr2:102500824:G:A	rs6741235	G	A	G	Sox2_MA0143.3	-14	0	+	0	0	.
chr2	102508997	102508998	chr2:102508998:A:G	rs6739301	A	G	G	Sox2_MA0143.3	18	0	+	0	0	.
chr2	102509006	102509007	chr2:102509007:T:C	rs6742381	T	C	C	Sox2_MA0143.3	27	0	+	0	0	.
chr2	102521420	102521421	chr2:102521421:C:G	rs4851612	C	G	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr2	102707070	102707071	chr2:102707071:A:C	rs34986119	A	C	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr2	102801244	102801245	chr2:102801245:A:G	rs2732816	A	G	G	Sox2_MA0143.3	18	0	+	0	0	.
chr2	103241628	103241629	chr2:103241629:A:G	rs74377984	A	G	A	Sox2_MA0143.3	16	0	-	0	0	.
chr2	103890111	103890112	chr2:103890112:C:T	rs77408703	C	T	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr2	103964044	103964045	chr2:103964045:C:T	rs12613775	C	T	C	Sox2_MA0143.3	18	0	+	0	0	.
chr2	104165121	104165122	chr2:104165122:T:C	rs12712184	T	C	.	Sox2_MA0143.3	21	0	-	0	0	.
chr2	104304428	104304429	chr2:104304429:A:G	rs13418480	A	G	G	Sox2_MA0143.3	19	0	+	0	0	.
chr2	104379341	104379342	chr2:104379342:C:T	rs4851692	C	T	T	Sox2_MA0143.3	15	0	+	0	0	.
chr2	104522644	104522645	chr2:104522645:C:T	rs62149693	C	T	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr2	104661221	104661222	chr2:104661222:C:G	rs72943454	C	G	G	Sox2_MA0143.3	13	0	+	0	0	.
chr2	104761461	104761462	chr2:104761462:A:G	rs2889326	A	G	G	Sox2_MA0143.3	8	0	-	0	0	.
chr2	104853405	104853406	chr2:104853406:A:G	rs6723328	A	G	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr2	104867400	104867401	chr2:104867401:A:G	rs892534368	A	G	A	Sox2_MA0143.3	-7	0	-	0	0	.
chr2	105104812	105104813	chr2:105104813:G:A	rs58343733	G	A	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr2	105161830	105161831	chr2:105161831:A:T	rs7583476	A	T	A	Sox2_MA0143.3	-3	0	+	0	0	.
chr2	105200899	105200900	chr2:105200900:C:T	rs59035810	C	T	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr2	105293101	105293102	chr2:105293102:G:A	rs2576746	G	A	G	Sox2_MA0143.3	7	1	-	9.019595766176417	9.613475778572903	CCATTGTC
chr2	105308912	105308913	chr2:105308913:G:A	rs1043754323	G	A	G	Sox2_MA0143.3	-11	0	+	0	0	.
chr2	105380628	105380629	chr2:105380629:T:C	rs34840777	T	C	T	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr2	105478984	105478985	chr2:105478985:G:A	rs114911290	G	A	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr2	105490538	105490539	chr2:105490539:C:T	rs11896170	C	T	T	Sox2_MA0143.3	-3	0	-	0	0	.
chr2	105503185	105503186	chr2:105503186:A:T	rs6723659	A	T	A	Sox2_MA0143.3	-2	0	-	0	0	.
chr2	105544378	105544379	chr2:105544379:C:G	rs11676548	C	G	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr2	105554346	105554347	chr2:105554347:G:A	rs17031232	G	A	G	Sox2_MA0143.3	10	0	-	0	0	.
chr2	105554368	105554369	chr2:105554369:T:C	rs17188560	T	C	T	Sox2_MA0143.3	-12	0	-	0	0	.
chr2	105568297	105568298	chr2:105568298:C:T	rs141445327	C	T	C	Sox2_MA0143.3	24	0	-	0	0	.
chr2	105604341	105604342	chr2:105604342:A:G	rs7576878	A	G	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr2	105611577	105611578	chr2:105611578:C:T	rs59608691	C	T	C	Sox2_MA0143.3	21	0	-	0	0	.
chr2	105629234	105629235	chr2:105629235:C:T	rs4851817	C	T	C	Sox2_MA0143.3	13	0	+	0	0	.
chr2	105641567	105641568	chr2:105641568:C:T	rs4851079	C	T	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr2	105641594	105641595	chr2:105641595:G:A	rs116164315	G	A	G	Sox2_MA0143.3	10	0	+	0	0	.
chr2	105644675	105644676	chr2:105644676:T:C	rs4851822	T	C	T	Sox2_MA0143.3	12	0	-	0	0	.
chr2	105669929	105669930	chr2:105669930:T:A	rs72933717	T	A	T	Sox2_MA0143.3	4	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr2	105674486	105674487	chr2:105674487:G:A	rs187117483	G	A	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr2	105674563	105674564	chr2:105674564:C:T	rs183293839	C	T	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr2	105721150	105721151	chr2:105721151:T:C	rs10188876	T	C	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr2	105732379	105732380	chr2:105732380:A:G	rs146440214	A	G	A	Sox2_MA0143.3	-15	0	-	0	0	.
chr2	105760624	105760625	chr2:105760625:G:A	rs1986015	G	A	G	Sox2_MA0143.3	16	0	+	0	0	.
chr2	105760625	105760626	chr2:105760626:G:C	rs2134082	G	C	G	Sox2_MA0143.3	17	0	+	0	0	.
chr2	105771591	105771592	chr2:105771592:A:C	rs10173137	A	C	A	Sox2_MA0143.3	-18	0	+	0	0	.
chr2	105771858	105771859	chr2:105771859:A:G	rs555547992	A	G	A	Sox2_MA0143.3	18	0	+	0	0	.
chr2	105781166	105781167	chr2:105781167:A:G	rs1897169	A	G	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr2	105822761	105822762	chr2:105822762:A:G	rs4851871	A	G	A	Sox2_MA0143.3	23	0	-	0	0	.
chr2	105836603	105836604	chr2:105836604:C:T	rs13429270	C	T	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr2	105869300	105869301	chr2:105869301:G:A	chr2:105869301:G:A	G	A	G	Sox2_MA0143.3	12	0	-	0	0	.
chr2	105949104	105949105	chr2:105949105:G:A	rs11684755	G	A	G	Sox2_MA0143.3	-3	0	-	0	0	.
chr2	106005139	106005140	chr2:106005140:A:G	rs1669510	A	G	A	Sox2_MA0143.3	25	0	+	0	0	.
chr2	106027350	106027351	chr2:106027351:T:C	rs1647692	T	C	C	Sox2_MA0143.3	-5	0	-	0	0	.
chr2	106062298	106062299	chr2:106062299:G:A	rs7557880	G	A	G	Sox2_MA0143.3	11	0	-	0	0	.
chr2	106165213	106165214	chr2:106165214:C:A	rs1025869	C	A	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr2	106190945	106190946	chr2:106190946:A:C	rs76308548	A	C	a	Sox2_MA0143.3	-5	0	-	0	0	.
chr2	106272653	106272654	chr2:106272654:T:C	rs7566900	T	C	C	Sox2_MA0143.3	25	0	+	0	0	.
chr2	106272735	106272736	chr2:106272736:C:T	rs55759094	C	T	C	Sox2_MA0143.3	23	0	+	0	0	.
chr2	106353714	106353715	chr2:106353715:G:A	rs12614415	G	A	g	Sox2_MA0143.3	5	1	+	8.676919043985553	1.7681642646703324	CCATTGTG
chr2	106511088	106511089	chr2:106511089:T:A	rs148308041	T	A	t	Sox2_MA0143.3	-5	0	+	0	0	.
chr2	106511089	106511090	chr2:106511090:C:G	rs7584087	C	G	c	Sox2_MA0143.3	-4	0	+	0	0	.
chr2	106602283	106602284	chr2:106602284:C:T	rs1117161	C	T	c	Sox2_MA0143.3	-11	0	+	0	0	.
chr2	106639316	106639317	chr2:106639317:C:T	rs6705060	C	T	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr2	106671749	106671750	chr2:106671750:C:T	rs143078067	C	T	T	Sox2_MA0143.3	-7	0	+	0	0	.
chr2	106826904	106826905	chr2:106826905:A:G	rs145254794	A	G	A	Sox2_MA0143.3	-8	0	+	0	0	.
chr2	106826912	106826913	chr2:106826913:C:A	rs12622433	C	A	C	Sox2_MA0143.3	0	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr2	106832531	106832532	chr2:106832532:C:T	rs12623034	C	T	C	Sox2_MA0143.3	12	0	+	0	0	.
chr2	106887687	106887688	chr2:106887688:T:C	rs62155555	T	C	T	Sox2_MA0143.3	23	0	+	0	0	.
chr2	107002687	107002688	chr2:107002688:T:C	rs1019036	T	C	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr2	107151985	107151986	chr2:107151986:C:T	rs4300823	C	T	T	Sox2_MA0143.3	20	0	+	0	0	.
chr2	107151986	107151987	chr2:107151987:C:G	rs11683370	C	G	C	Sox2_MA0143.3	21	0	+	0	0	.
chr2	107216229	107216230	chr2:107216230:G:A	rs2377843	G	A	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr2	107264123	107264124	chr2:107264124:A:T	rs6713136	A	T	T	Sox2_MA0143.3	-12	0	+	0	0	.
chr2	107299843	107299844	chr2:107299844:A:G	rs2191583	A	G	g	Sox2_MA0143.3	23	0	+	0	0	.
chr2	107326182	107326183	chr2:107326183:A:G	rs112754343	A	G	A	Sox2_MA0143.3	17	0	+	0	0	.
chr2	107389104	107389105	chr2:107389105:C:A	rs35885705	C	A	A	Sox2_MA0143.3	25	0	-	0	0	.
chr2	107395272	107395273	chr2:107395273:G:C	rs144224074	G	C	G	Sox2_MA0143.3	5	1	+	9.019595766176417	2.110840986861197	CCATTGTC
chr2	107551343	107551344	chr2:107551344:T:C	rs12468034	T	C	T	Sox2_MA0143.3	12	0	+	0	0	.
chr2	107594973	107594974	chr2:107594974:C:T	rs62158804	C	T	C	Sox2_MA0143.3	10	0	-	0	0	.
chr2	107717805	107717806	chr2:107717806:C:G	chr2:107717806:C:G	C	G	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr2	107987045	107987046	chr2:107987046:C:T	rs4676168	C	T	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr2	108060168	108060169	chr2:108060169:A:T	rs7592142	A	T	T	Sox2_MA0143.3	-18	0	+	0	0	.
chr2	108060175	108060176	chr2:108060176:C:G	rs7565759	C	G	G	Sox2_MA0143.3	-11	0	+	0	0	.
chr2	108116008	108116009	chr2:108116009:C:G	rs75141653	C	G	C	Sox2_MA0143.3	7	1	-	8.864090315184848	9.206767037375712	CCTTTGTG
chr2	108146421	108146422	chr2:108146422:A:G	rs1000173	A	G	A	Sox2_MA0143.3	14	0	-	0	0	.
chr2	108189788	108189789	chr2:108189789:A:G	rs13414687	A	G	A	Sox2_MA0143.3	-5	0	+	0	0	.
chr2	108555004	108555005	chr2:108555005:C:A	rs9631040	C	A	a	Sox2_MA0143.3	-20	0	+	0	0	.
chr2	108580790	108580791	chr2:108580791:C:T	rs1866187	C	T	C	Sox2_MA0143.3	25	0	+	0	0	.
chr2	108662043	108662044	chr2:108662044:G:A	rs12619855	G	A	G	Sox2_MA0143.3	15	0	-	0	0	.
chr2	108699683	108699684	chr2:108699684:G:T	rs185511753	G	T	G	Sox2_MA0143.3	21	0	-	0	0	.
chr2	108893695	108893696	chr2:108893696:C:T	rs6747261	C	T	C	Sox2_MA0143.3	18	0	-	0	0	.
chr2	108950988	108950989	chr2:108950989:A:G	rs260699	A	G	A	Sox2_MA0143.3	12	0	+	0	0	.
chr2	108985507	108985508	chr2:108985508:T:C	rs532478698	T	C	T	Sox2_MA0143.3	19	0	-	0	0	.
chr2	108993579	108993580	chr2:108993580:A:G	rs260682	A	G	A	Sox2_MA0143.3	-12	0	+	0	0	.
chr2	109057982	109057983	chr2:109057983:T:C	rs417163	T	C	C	Sox2_MA0143.3	6	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr2	109139751	109139752	chr2:109139752:A:G	rs961115536	A	G	A	Sox2_MA0143.3	26	0	-	0	0	.
chr2	109187560	109187561	chr2:109187561:C:T	rs1560385	C	T	T	Sox2_MA0143.3	26	0	+	0	0	.
chr2	109218119	109218120	chr2:109218120:C:T	rs59435356	C	T	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr2	109226664	109226665	chr2:109226665:A:G	rs17035199	A	G	A	Sox2_MA0143.3	-12	0	+	0	0	.
chr2	109242878	109242879	chr2:109242879:G:A	rs1306096163	G	A	G	Sox2_MA0143.3	1	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr2	109242888	109242889	chr2:109242889:A:G	rs58346821	A	G	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr2	109244206	109244207	chr2:109244207:T:C	rs13395838	T	C	T	Sox2_MA0143.3	-8	0	-	0	0	.
chr2	109261217	109261218	chr2:109261218:A:G	rs187295649	A	G	A	Sox2_MA0143.3	21	0	+	0	0	.
chr2	109261221	109261222	chr2:109261222:C:T	rs76592711	C	T	C	Sox2_MA0143.3	25	0	+	0	0	.
chr2	109267240	109267241	chr2:109267241:A:C	rs11123735	A	C	C	Sox2_MA0143.3	14	0	-	0	0	.
chr2	109289332	109289333	chr2:109289333:A:G	rs11691871	A	G	A	Sox2_MA0143.3	8	0	-	0	0	.
chr2	109305608	109305609	chr2:109305609:A:G	rs7589719	A	G	G	Sox2_MA0143.3	6	1	-	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr2	109337327	109337328	chr2:109337328:C:T	rs140820656	C	T	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr2	109355950	109355951	chr2:109355951:C:T	rs7605935	C	T	C	Sox2_MA0143.3	0	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr2	109385294	109385295	chr2:109385295:G:C	rs6542819	G	C	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr2	109458945	109458946	chr2:109458946:G:A	rs7424652	G	A	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr2	109546298	109546299	chr2:109546299:G:A	rs77718365	G	A	G	Sox2_MA0143.3	16	0	-	0	0	.
chr2	109546316	109546317	chr2:109546317:G:A	rs77142995	G	A	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr2	109546327	109546328	chr2:109546328:C:T	rs766980896	C	T	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr2	109547090	109547091	chr2:109547091:C:T	rs72824785	C	T	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr2	109575433	109575434	chr2:109575434:A:T	rs78662481	A	T	A	Sox2_MA0143.3	14	0	-	0	0	.
chr2	109699048	109699049	chr2:109699049:A:C	rs139373194	A	C	.	Sox2_MA0143.3	21	0	+	0	0	.
chr2	110213449	110213450	chr2:110213450:A:C	rs1509415	A	C	C	Sox2_MA0143.3	14	0	+	0	0	.
chr2	110689002	110689003	chr2:110689003:C:T	chr2:110689003:C:T	C	T	C	Sox2_MA0143.3	19	0	-	0	0	.
chr2	110689003	110689004	chr2:110689004:C:G	chr2:110689004:C:G	C	G	C	Sox2_MA0143.3	18	0	-	0	0	.
chr2	110959417	110959418	chr2:110959418:G:A	rs3827548	G	A	G	Sox2_MA0143.3	21	0	+	0	0	.
chr2	110992343	110992344	chr2:110992344:A:C	rs3789095	A	C	C	Sox2_MA0143.3	13	0	+	0	0	.
chr2	111255094	111255095	chr2:111255095:C:A	rs57874285	C	A	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr2	111255104	111255105	chr2:111255105:C:A	rs57707030	C	A	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr2	111419045	111419046	chr2:111419046:C:G	rs143496984	C	G	C	Sox2_MA0143.3	20	0	-	0	0	.
chr2	111507263	111507264	chr2:111507264:C:A	rs74921454	C	A	C	Sox2_MA0143.3	1	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr2	111522641	111522642	chr2:111522642:C:A	rs113701162	C	A	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr2	111522646	111522647	chr2:111522647:G:A	rs114474170	G	A	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr2	111662367	111662368	chr2:111662368:G:T	rs55877608	G	T	G	Sox2_MA0143.3	16	0	+	0	0	.
chr2	111689253	111689254	chr2:111689254:C:A	rs12999970	C	A	C	Sox2_MA0143.3	5	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr2	111709554	111709555	chr2:111709555:A:G	rs7559932	A	G	G	Sox2_MA0143.3	6	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr2	111893827	111893828	chr2:111893828:C:T	rs4535048	C	T	-	Sox2_MA0143.3	-3	0	-	0	0	.
chr2	111939312	111939313	chr2:111939313:C:T	rs184472407	C	T	C	Sox2_MA0143.3	0	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr2	111976139	111976140	chr2:111976140:G:A	rs68087924	G	A	g	Sox2_MA0143.3	-19	0	-	0	0	.
chr2	111986682	111986683	chr2:111986683:C:T	rs10207726	C	T	C	Sox2_MA0143.3	13	0	+	0	0	.
chr2	111995442	111995443	chr2:111995443:A:G	rs77702371	A	G	A	Sox2_MA0143.3	-7	0	+	0	0	.
chr2	112011096	112011097	chr2:112011097:T:G	rs184916886	T	G	T	Sox2_MA0143.3	11	0	+	0	0	.
chr2	112031780	112031781	chr2:112031781:G:C	rs778313339	G	C	G	Sox2_MA0143.3	5	1	+	9.613475778572903	2.7047209992576837	CCATTGTT
chr2	112151897	112151898	chr2:112151898:G:T	rs78016864	G	T	G	Sox2_MA0143.3	21	0	-	0	0	.
chr2	112167329	112167330	chr2:112167330:T:C	rs10189625	T	C	C	Sox2_MA0143.3	18	0	-	0	0	.
chr2	112192135	112192136	chr2:112192136:G:A	rs12620553	G	A	A	Sox2_MA0143.3	13	0	+	0	0	.
chr2	112220547	112220548	chr2:112220548:G:A	rs139894800	G	A	G	Sox2_MA0143.3	17	0	+	0	0	.
chr2	112434542	112434543	chr2:112434543:G:A	rs115357775	G	A	.	Sox2_MA0143.3	-13	0	-	0	0	.
chr2	112627336	112627337	chr2:112627337:G:A	rs114444130	G	A	G	Sox2_MA0143.3	11	0	-	0	0	.
chr2	112642782	112642783	chr2:112642783:C:T	rs148793068	C	T	C	Sox2_MA0143.3	14	0	+	0	0	.
chr2	112712810	112712811	chr2:112712811:C:A	rs72950328	C	A	C	Sox2_MA0143.3	18	0	-	0	0	.
chr2	112719064	112719065	chr2:112719065:G:A	rs4849114	G	A	g	Sox2_MA0143.3	-7	0	+	0	0	.
chr2	112842748	112842749	chr2:112842749:T:C	rs13013349	T	C	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr2	112848379	112848380	chr2:112848380:C:T	rs4447608	C	T	C	Sox2_MA0143.3	8	0	+	0	0	.
chr2	112907239	112907240	chr2:112907240:T:C	rs10173180	T	C	t	Sox2_MA0143.3	13	0	-	0	0	.
chr2	112952775	112952776	chr2:112952776:G:A	rs6747618	G	A	N	Sox2_MA0143.3	22	0	+	0	0	.
chr2	112969304	112969305	chr2:112969305:G:C	rs17607787	G	C	g	Sox2_MA0143.3	26	0	-	0	0	.
chr2	113028252	113028253	chr2:113028253:C:T	rs184119089	C	T	c	Sox2_MA0143.3	-10	0	-	0	0	.
chr2	113053479	113053480	chr2:113053480:A:G	rs11123158	A	G	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr2	113075196	113075197	chr2:113075197:C:T	rs138974369	C	T	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr2	113134946	113134947	chr2:113134947:G:A	rs4252042	G	A	G	Sox2_MA0143.3	10	0	+	0	0	.
chr2	113156692	113156693	chr2:113156693:G:T	rs6739871	G	T	G	Sox2_MA0143.3	24	0	+	0	0	.
chr2	113165405	113165406	chr2:113165406:T:C	rs1867761	T	C	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr2	113169233	113169234	chr2:113169234:C:T	rs374811693	C	T	C	Sox2_MA0143.3	26	0	+	0	0	.
chr2	113175222	113175223	chr2:113175223:T:C	rs12711762	T	C	C	Sox2_MA0143.3	9	0	+	0	0	.
chr2	113175233	113175234	chr2:113175234:C:G	rs12711763	C	G	C	Sox2_MA0143.3	20	0	+	0	0	.
chr2	113226359	113226360	chr2:113226360:T:C	rs3748915	T	C	T	Sox2_MA0143.3	-6	0	-	0	0	.
chr2	113240407	113240408	chr2:113240408:A:G	rs73955181	A	G	A	Sox2_MA0143.3	10	0	+	0	0	.
chr2	113282566	113282567	chr2:113282567:G:A	rs12999288	G	A	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr2	113305986	113305987	chr2:113305987:G:A	rs183214885	G	A	G	Sox2_MA0143.3	23	0	+	0	0	.
chr2	113357259	113357260	chr2:113357260:T:G	rs111526512	T	G	.	Sox2_MA0143.3	8	0	-	0	0	.
chr2	113390405	113390406	chr2:113390406:G:A	rs147319857	G	A	.	Sox2_MA0143.3	19	0	+	0	0	.
chr2	113499810	113499811	chr2:113499811:C:T	rs144904377	C	T	.	Sox2_MA0143.3	26	0	-	0	0	.
chr2	113499823	113499824	chr2:113499824:A:G	rs76067948	A	G	.	Sox2_MA0143.3	13	0	-	0	0	.
chr2	113583802	113583803	chr2:113583803:A:G	rs28580044	A	G	N	Sox2_MA0143.3	15	0	-	0	0	.
chr2	113583804	113583805	chr2:113583805:C:G	rs111952003	C	G	-	Sox2_MA0143.3	13	0	-	0	0	.
chr2	113635138	113635139	chr2:113635139:C:T	rs793078	C	T	c	Sox2_MA0143.3	20	0	-	0	0	.
chr2	113701643	113701644	chr2:113701644:G:A	rs72944659	G	A	G	Sox2_MA0143.3	19	0	-	0	0	.
chr2	113840368	113840369	chr2:113840369:C:T	rs35893878	C	T	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr2	113863668	113863669	chr2:113863669:A:G	rs73957403	A	G	A	Sox2_MA0143.3	17	0	-	0	0	.
chr2	113867844	113867845	chr2:113867845:T:C	rs34767335	T	C	t	Sox2_MA0143.3	2	1	-	8.676919043985553	2.5582713367092715	CCATTGTG
chr2	113873942	113873943	chr2:113873943:C:T	rs3748998	C	T	T	Sox2_MA0143.3	-17	0	+	0	0	.
chr2	113873974	113873975	chr2:113873975:T:C	rs79816258	T	C	T	Sox2_MA0143.3	15	0	+	0	0	.
chr2	113876716	113876717	chr2:113876717:T:C	rs1220814197	T	C	T	Sox2_MA0143.3	-8	0	-	0	0	.
chr2	114002060	114002061	chr2:114002061:G:A	rs115061750	G	A	G	Sox2_MA0143.3	1	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr2	114201481	114201482	chr2:114201482:C:T	rs7557572	C	T	C	Sox2_MA0143.3	12	0	+	0	0	.
chr2	114489579	114489580	chr2:114489580:G:A	rs17048427	G	A	G	Sox2_MA0143.3	15	0	+	0	0	.
chr2	114667532	114667533	chr2:114667533:G:A	rs12995656	G	A	G	Sox2_MA0143.3	-3	0	-	0	0	.
chr2	115086083	115086084	chr2:115086084:A:G	rs10205094	A	G	G	Sox2_MA0143.3	-2	0	+	0	0	.
chr2	115358069	115358070	chr2:115358070:G:A	rs1021984138	G	A	G	Sox2_MA0143.3	-12	0	+	0	0	.
chr2	115503504	115503505	chr2:115503505:C:T	rs2166906	C	T	T	Sox2_MA0143.3	-3	0	-	0	0	.
chr2	115583017	115583018	chr2:115583018:C:T	rs76275077	C	T	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr2	115593294	115593295	chr2:115593295:G:A	rs76691335	G	A	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr2	115880744	115880745	chr2:115880745:G:A	rs272035	G	A	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr2	115984998	115984999	chr2:115984999:G:T	rs28869816	G	T	G	Sox2_MA0143.3	7	1	+	8.864090315184848	9.800647049772198	CCTTTGTG
chr2	116142397	116142398	chr2:116142398:A:G	rs11692927	A	G	A	Sox2_MA0143.3	3	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr2	116487332	116487333	chr2:116487333:C:A	rs13020795	C	A	C	Sox2_MA0143.3	1	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr2	117057068	117057069	chr2:117057069:G:A	rs9646903	G	A	G	Sox2_MA0143.3	10	0	-	0	0	.
chr2	117128588	117128589	chr2:117128589:A:G	rs542728125	A	G	A	Sox2_MA0143.3	-8	0	+	0	0	.
chr2	117420499	117420500	chr2:117420500:A:T	rs2901595	A	T	A	Sox2_MA0143.3	18	0	+	0	0	.
chr2	117422233	117422234	chr2:117422234:A:G	rs190775840	A	G	A	Sox2_MA0143.3	9	0	+	0	0	.
chr2	117538695	117538696	chr2:117538696:A:C	rs7571568	A	C	A	Sox2_MA0143.3	15	0	-	0	0	.
chr2	117617682	117617683	chr2:117617683:A:G	rs13426722	A	G	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr2	117618087	117618088	chr2:117618088:T:C	rs17047176	T	C	T	Sox2_MA0143.3	-9	0	-	0	0	.
chr2	117664204	117664205	chr2:117664205:T:C	rs563544797	T	C	t	Sox2_MA0143.3	-7	0	-	0	0	.
chr2	117679921	117679922	chr2:117679922:A:G	rs35985264	A	G	A	Sox2_MA0143.3	7	1	-	9.800647049772198	9.206767037375712	CCTTTGTT
chr2	117714725	117714726	chr2:117714726:C:T	rs145813826	C	T	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr2	117714763	117714764	chr2:117714764:G:T	rs17047315	G	T	G	Sox2_MA0143.3	24	0	+	0	0	.
chr2	118078448	118078449	chr2:118078449:C:G	rs7566605	C	G	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr2	118186191	118186192	chr2:118186192:C:T	rs72952782	C	T	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr2	118186224	118186225	chr2:118186225:T:A	rs146789202	T	A	T	Sox2_MA0143.3	15	0	+	0	0	.
chr2	118186227	118186228	chr2:118186228:C:T	rs72952784	C	T	C	Sox2_MA0143.3	18	0	+	0	0	.
chr2	118186378	118186379	chr2:118186379:G:A	rs1172325833	G	A	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr2	118251811	118251812	chr2:118251812:G:A	rs7604243	G	A	G	Sox2_MA0143.3	-16	0	-	0	0	.
chr2	118285432	118285433	chr2:118285433:C:T	rs2422240	C	T	T	Sox2_MA0143.3	7	1	+	9.019595766176417	9.613475778572903	CCATTGTC
chr2	118436035	118436036	chr2:118436036:C:T	rs62162153	C	T	T	Sox2_MA0143.3	22	0	-	0	0	.
chr2	118593378	118593379	chr2:118593379:C:T	rs145471072	C	T	C	Sox2_MA0143.3	1	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr2	118705729	118705730	chr2:118705730:A:C	rs460442	A	C	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr2	118707558	118707559	chr2:118707559:T:C	rs461402	T	C	t	Sox2_MA0143.3	25	0	-	0	0	.
chr2	118731806	118731807	chr2:118731807:C:T	rs332071	C	T	C	Sox2_MA0143.3	26	0	-	0	0	.
chr2	118804719	118804720	chr2:118804720:T:A	rs4241151	T	A	A	Sox2_MA0143.3	14	0	-	0	0	.
chr2	118893337	118893338	chr2:118893338:T:C	rs10187538	T	C	C	Sox2_MA0143.3	27	0	+	0	0	.
chr2	118905051	118905052	chr2:118905052:T:G	rs10460475	T	G	G	Sox2_MA0143.3	6	1	+	9.019595766176417	2.110840986861197	CCATTGTC
chr2	118973611	118973612	chr2:118973612:T:C	rs4849743	T	C	T	Sox2_MA0143.3	2	1	+	9.800647049772198	3.494828071296623	CCTTTGTT
chr2	118991900	118991901	chr2:118991901:T:G	rs2304708	T	G	G	Sox2_MA0143.3	4	1	+	9.800647049772198	2.8918922704569785	CCTTTGTT
chr2	119078679	119078680	chr2:119078680:A:G	rs114026193	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr2	119110386	119110387	chr2:119110387:A:G	rs895402	A	G	A	Sox2_MA0143.3	-15	0	-	0	0	.
chr2	119127960	119127961	chr2:119127961:G:A	rs1027974366	G	A	G	Sox2_MA0143.3	10	0	-	0	0	.
chr2	119210348	119210349	chr2:119210349:T:G	rs6754664	T	G	T	Sox2_MA0143.3	17	0	-	0	0	.
chr2	119259205	119259206	chr2:119259206:G:A	rs73948631	G	A	A	Sox2_MA0143.3	10	0	+	0	0	.
chr2	119259438	119259439	chr2:119259439:A:G	rs938527039	A	G	A	Sox2_MA0143.3	-5	0	+	0	0	.
chr2	119284315	119284316	chr2:119284316:C:T	rs72840948	C	T	C	Sox2_MA0143.3	16	0	-	0	0	.
chr2	119315360	119315361	chr2:119315361:T:G	rs72829473	T	G	T	Sox2_MA0143.3	11	0	-	0	0	.
chr2	119315390	119315391	chr2:119315391:C:T	rs78051724	C	T	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr2	119372684	119372685	chr2:119372685:T:C	rs2289947	T	C	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr2	119392208	119392209	chr2:119392209:G:C	rs9308776	G	C	G	Sox2_MA0143.3	0	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr2	119394021	119394022	chr2:119394022:C:A	rs112995043	C	A	C	Sox2_MA0143.3	14	0	-	0	0	.
chr2	119486013	119486014	chr2:119486014:G:C	rs891116680	G	C	G	Sox2_MA0143.3	-11	0	+	0	0	.
chr2	119492694	119492695	chr2:119492695:C:T	rs62158528	C	T	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr2	119518509	119518510	chr2:119518510:C:T	rs11689041	C	T	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr2	119608852	119608853	chr2:119608853:T:C	rs34210676	T	C	T	Sox2_MA0143.3	24	0	-	0	0	.
chr2	119638660	119638661	chr2:119638661:A:T	rs939772	A	T	A	Sox2_MA0143.3	21	0	+	0	0	.
chr2	119651774	119651775	chr2:119651775:C:T	rs1521911	C	T	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr2	120251233	120251234	chr2:120251234:A:G	rs1329158636	A	G	A	Sox2_MA0143.3	-6	0	-	0	0	.
chr2	120260960	120260961	chr2:120260961:A:G	rs11893187	A	G	g	Sox2_MA0143.3	-11	0	-	0	0	.
chr2	120269194	120269195	chr2:120269195:T:C	rs62168279	T	C	T	Sox2_MA0143.3	22	0	+	0	0	.
chr2	120279000	120279001	chr2:120279001:C:T	rs72843017	C	T	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr2	120323045	120323046	chr2:120323046:G:A	rs35047149	G	A	g	Sox2_MA0143.3	-14	0	+	0	0	.
chr2	120367454	120367455	chr2:120367455:A:G	rs12471301	A	G	G	Sox2_MA0143.3	4	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr2	120399356	120399357	chr2:120399357:C:T	rs73949121	C	T	C	Sox2_MA0143.3	19	0	+	0	0	.
chr2	120439764	120439765	chr2:120439765:C:A	rs4300832	C	A	A	Sox2_MA0143.3	15	0	-	0	0	.
chr2	120467626	120467627	chr2:120467627:C:T	chr2:120467627:C:T	C	T	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr2	120472019	120472020	chr2:120472020:C:T	rs13410508	C	T	T	Sox2_MA0143.3	-4	0	-	0	0	.
chr2	120503833	120503834	chr2:120503834:G:A	rs115426727	G	A	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr2	120566145	120566146	chr2:120566146:G:A	rs113626045	G	A	G	Sox2_MA0143.3	15	0	-	0	0	.
chr2	120575352	120575353	chr2:120575353:C:T	rs35911321	C	T	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr2	120590035	120590036	chr2:120590036:G:C	rs11688682	G	C	G	Sox2_MA0143.3	25	0	+	0	0	.
chr2	120590426	120590427	chr2:120590427:C:T	rs984910188	C	T	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr2	120619709	120619710	chr2:120619710:C:G	rs6742498	C	G	C	Sox2_MA0143.3	11	0	-	0	0	.
chr2	120620506	120620507	chr2:120620507:T:A	rs2068251	T	A	A	Sox2_MA0143.3	-2	0	-	0	0	.
chr2	120642043	120642044	chr2:120642044:G:C	rs151109342	G	C	G	Sox2_MA0143.3	23	0	+	0	0	.
chr2	120677819	120677820	chr2:120677820:G:T	rs139796560	G	T	G	Sox2_MA0143.3	13	0	-	0	0	.
chr2	120706438	120706439	chr2:120706439:G:A	rs17050332	G	A	g	Sox2_MA0143.3	-9	0	+	0	0	.
chr2	120707285	120707286	chr2:120707286:G:A	rs13387840	G	A	g	Sox2_MA0143.3	-16	0	-	0	0	.
chr2	120824802	120824803	chr2:120824803:A:G	rs56198827	A	G	A	Sox2_MA0143.3	4	1	-	9.206767037375712	2.2980122580604916	CCTTTGTC
chr2	120826031	120826032	chr2:120826032:G:A	rs11898103	G	A	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr2	120859681	120859682	chr2:120859682:C:T	rs4848642	C	T	T	Sox2_MA0143.3	-12	0	-	0	0	.
chr2	120875289	120875290	chr2:120875290:G:A	rs55751863	G	A	G	Sox2_MA0143.3	1	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr2	121045179	121045180	chr2:121045180:G:A	rs730309	G	A	G	Sox2_MA0143.3	-5	0	+	0	0	.
chr2	121097316	121097317	chr2:121097317:C:A	rs12474368	C	A	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr2	121097331	121097332	chr2:121097332:A:T	rs12466272	A	T	T	Sox2_MA0143.3	13	0	+	0	0	.
chr2	121118928	121118929	chr2:121118929:A:G	rs17005873	A	G	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr2	121118972	121118973	chr2:121118973:C:T	rs59908749	C	T	C	Sox2_MA0143.3	25	0	+	0	0	.
chr2	121142944	121142945	chr2:121142945:C:T	rs72843428	C	T	C	Sox2_MA0143.3	24	0	-	0	0	.
chr2	121152221	121152222	chr2:121152222:C:T	rs6724707	C	T	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr2	121171871	121171872	chr2:121171872:C:T	rs79826670	C	T	C	Sox2_MA0143.3	24	0	+	0	0	.
chr2	121186754	121186755	chr2:121186755:A:G	rs11900914	A	G	G	Sox2_MA0143.3	10	0	-	0	0	.
chr2	121317194	121317195	chr2:121317195:G:A	rs2713202	G	A	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr2	121480195	121480196	chr2:121480196:T:C	rs12616602	T	C	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr2	121529985	121529986	chr2:121529986:G:A	rs931695524	G	A	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr2	121539912	121539913	chr2:121539913:C:T	rs13395495	C	T	T	Sox2_MA0143.3	15	0	-	0	0	.
chr2	121602700	121602701	chr2:121602701:T:C	rs7595166	T	C	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr2	121614115	121614116	chr2:121614116:A:C	rs287787	A	C	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr2	121635357	121635358	chr2:121635358:C:T	rs116757679	C	T	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr2	121719380	121719381	chr2:121719381:A:C	rs58340905	A	C	C	Sox2_MA0143.3	17	0	-	0	0	.
chr2	121828655	121828656	chr2:121828656:C:T	rs6541806	C	T	C	Sox2_MA0143.3	14	0	-	0	0	.
chr2	121861033	121861034	chr2:121861034:T:G	rs72830891	T	G	G	Sox2_MA0143.3	3	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr2	121908069	121908070	chr2:121908070:C:T	rs72833045	C	T	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr2	121908078	121908079	chr2:121908079:A:T	rs62152453	A	T	T	Sox2_MA0143.3	-2	0	+	0	0	.
chr2	122055634	122055635	chr2:122055635:G:A	rs10187171	G	A	A	Sox2_MA0143.3	25	0	+	0	0	.
chr2	122064490	122064491	chr2:122064491:A:C	chr2:122064491:A:C	A	C	A	Sox2_MA0143.3	-16	0	+	0	0	.
chr2	122064491	122064492	chr2:122064492:A:G	rs148306180	A	G	A	Sox2_MA0143.3	-15	0	+	0	0	.
chr2	122162070	122162071	chr2:122162071:G:A	rs6758507	G	A	A	Sox2_MA0143.3	20	0	-	0	0	.
chr2	122575046	122575047	chr2:122575047:C:G	rs79250915	C	G	-	Sox2_MA0143.3	-1	0	+	0	0	.
chr2	122596748	122596749	chr2:122596749:T:C	rs11895636	T	C	T	Sox2_MA0143.3	22	0	+	0	0	.
chr2	122623082	122623083	chr2:122623083:G:A	rs62167028	G	A	G	Sox2_MA0143.3	25	0	+	0	0	.
chr2	122755179	122755180	chr2:122755180:G:A	rs537659277	G	A	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr2	122808444	122808445	chr2:122808445:T:C	rs294671	T	C	T	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr2	122808932	122808933	chr2:122808933:C:G	rs145077743	C	G	C	Sox2_MA0143.3	20	0	-	0	0	.
chr2	122816844	122816845	chr2:122816845:C:T	rs2663180	C	T	T	Sox2_MA0143.3	16	0	-	0	0	.
chr2	123080606	123080607	chr2:123080607:G:C	rs2135888	G	C	C	Sox2_MA0143.3	18	0	+	0	0	.
chr2	123132317	123132318	chr2:123132318:G:A	rs7585942	G	A	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr2	123503102	123503103	chr2:123503103:C:T	rs2419972	C	T	C	Sox2_MA0143.3	23	0	-	0	0	.
chr2	123529668	123529669	chr2:123529669:C:A	rs2419967	C	A	A	Sox2_MA0143.3	1	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr2	123654913	123654914	chr2:123654914:C:T	rs1047236150	C	T	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr2	123682799	123682800	chr2:123682800:C:T	rs150884960	C	T	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr2	123826236	123826237	chr2:123826237:T:G	rs10198263	T	G	T	Sox2_MA0143.3	14	0	-	0	0	.
chr2	123907918	123907919	chr2:123907919:C:T	rs116660903	C	T	C	Sox2_MA0143.3	27	0	-	0	0	.
chr2	123907923	123907924	chr2:123907924:A:G	rs112660465	A	G	A	Sox2_MA0143.3	22	0	-	0	0	.
chr2	123941077	123941078	chr2:123941078:A:T	rs1214124	A	T	A	Sox2_MA0143.3	2	1	+	8.676919043985553	8.864090315184848	CCATTGTG
chr2	124027412	124027413	chr2:124027413:G:A	rs114223405	G	A	G	Sox2_MA0143.3	14	0	-	0	0	.
chr2	124046403	124046404	chr2:124046404:C:T	rs139273637	C	T	C	Sox2_MA0143.3	18	0	+	0	0	.
chr2	124110864	124110865	chr2:124110865:G:T	rs1036608	G	T	T	Sox2_MA0143.3	8	0	-	0	0	.
chr2	124285194	124285195	chr2:124285195:G:A	chr2:124285195:G:A	G	A	G	Sox2_MA0143.3	-5	0	+	0	0	.
chr2	124304850	124304851	chr2:124304851:A:G	rs866613280	A	G	A	Sox2_MA0143.3	22	0	+	0	0	.
chr2	124317455	124317456	chr2:124317456:G:A	rs115808489	G	A	G	Sox2_MA0143.3	16	0	-	0	0	.
chr2	124369244	124369245	chr2:124369245:A:G	rs779982	A	G	A	Sox2_MA0143.3	9	0	+	0	0	.
chr2	124523252	124523253	chr2:124523253:A:T	rs882950	A	T	T	Sox2_MA0143.3	-15	0	-	0	0	.
chr2	124551515	124551516	chr2:124551516:G:A	rs10185849	G	A	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr2	124607860	124607861	chr2:124607861:G:C	rs12466900	G	C	G	Sox2_MA0143.3	20	0	+	0	0	.
chr2	124632144	124632145	chr2:124632145:A:G	rs113085279	A	G	G	Sox2_MA0143.3	22	0	+	0	0	.
chr2	124634066	124634067	chr2:124634067:G:A	rs7573251	G	A	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr2	124995754	124995755	chr2:124995755:G:T	rs2421354	G	T	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr2	125082194	125082195	chr2:125082195:C:A	rs34895303	C	A	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr2	125340069	125340070	chr2:125340070:G:A	rs13022129	G	A	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr2	125747433	125747434	chr2:125747434:G:A	rs2901494	G	A	G	Sox2_MA0143.3	-12	0	+	0	0	.
chr2	125787390	125787391	chr2:125787391:G:C	rs114234679	G	C	G	Sox2_MA0143.3	13	0	-	0	0	.
chr2	125998331	125998332	chr2:125998332:T:G	rs1012905259	T	G	T	Sox2_MA0143.3	-9	0	+	0	0	.
chr2	126507374	126507375	chr2:126507375:T:A	rs7606965	T	A	T	Sox2_MA0143.3	10	0	+	0	0	.
chr2	126586569	126586570	chr2:126586570:G:T	rs10204012	G	T	G	Sox2_MA0143.3	-9	0	+	0	0	.
chr2	126586588	126586589	chr2:126586589:C:T	rs79797370	C	T	C	Sox2_MA0143.3	10	0	+	0	0	.
chr2	126655524	126655525	chr2:126655525:A:G	rs28387081	A	G	A	Sox2_MA0143.3	10	0	-	0	0	.
chr2	126676953	126676954	chr2:126676954:G:A	rs28369987	G	A	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr2	126700152	126700153	chr2:126700153:C:T	rs57619813	C	T	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr2	126700173	126700174	chr2:126700174:T:G	rs770475770	T	G	T	Sox2_MA0143.3	19	0	+	0	0	.
chr2	126731605	126731606	chr2:126731606:G:A	rs778142586	G	A	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr2	126748545	126748546	chr2:126748546:G:A	rs115402211	G	A	G	Sox2_MA0143.3	5	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr2	126769238	126769239	chr2:126769239:A:G	rs72976002	A	G	A	Sox2_MA0143.3	11	0	-	0	0	.
chr2	126773031	126773032	chr2:126773032:G:T	rs10928986	G	T	T	Sox2_MA0143.3	8	0	+	0	0	.
chr2	126789481	126789482	chr2:126789482:A:G	rs4366850	A	G	A	Sox2_MA0143.3	11	0	-	0	0	.
chr2	126791398	126791399	chr2:126791399:C:T	rs142474918	C	T	C	Sox2_MA0143.3	20	0	+	0	0	.
chr2	126831647	126831648	chr2:126831648:C:T	rs150780089	C	T	C	Sox2_MA0143.3	26	0	-	0	0	.
chr2	126834941	126834942	chr2:126834942:A:C	rs56349541	A	C	A	Sox2_MA0143.3	27	0	-	0	0	.
chr2	126859831	126859832	chr2:126859832:G:T	rs78847536	G	T	G	Sox2_MA0143.3	15	0	-	0	0	.
chr2	127080538	127080539	chr2:127080539:C:T	rs55769487	C	T	c	Sox2_MA0143.3	27	0	-	0	0	.
chr2	127082121	127082122	chr2:127082122:C:T	rs148981230	C	T	C	Sox2_MA0143.3	10	0	-	0	0	.
chr2	127100559	127100560	chr2:127100560:C:T	rs12618318	C	T	C	Sox2_MA0143.3	15	0	+	0	0	.
chr2	127144659	127144660	chr2:127144660:A:C	rs140688077	A	C	A	Sox2_MA0143.3	11	0	+	0	0	.
chr2	127146186	127146187	chr2:127146187:G:A	rs1983089	G	A	G	Sox2_MA0143.3	10	0	+	0	0	.
chr2	127146190	127146191	chr2:127146191:C:T	rs185583176	C	T	C	Sox2_MA0143.3	14	0	+	0	0	.
chr2	127160671	127160672	chr2:127160672:A:T	rs4663107	A	T	A	Sox2_MA0143.3	2	1	+	9.613475778572903	9.800647049772198	CCATTGTT
chr2	127194150	127194151	chr2:127194151:C:T	rs1002003957	C	T	C	Sox2_MA0143.3	25	0	+	0	0	.
chr2	127292054	127292055	chr2:127292055:T:C	rs4150407	T	C	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr2	127427992	127427993	chr2:127427993:C:T	rs2069931	C	T	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr2	127437810	127437811	chr2:127437811:G:A	rs6754999	G	A	G	Sox2_MA0143.3	15	0	-	0	0	.
chr2	127516476	127516477	chr2:127516477:T:C	rs546577926	T	C	C	Sox2_MA0143.3	16	0	-	0	0	.
chr2	127552769	127552770	chr2:127552770:G:A	rs77252086	G	A	G	Sox2_MA0143.3	-16	0	-	0	0	.
chr2	127582974	127582975	chr2:127582975:G:T	rs7602565	G	T	G	Sox2_MA0143.3	18	0	-	0	0	.
chr2	127582995	127582996	chr2:127582996:G:T	rs146660224	G	T	G	Sox2_MA0143.3	-3	0	-	0	0	.
chr2	127584649	127584650	chr2:127584650:T:C	rs77901993	T	C	T	Sox2_MA0143.3	13	0	-	0	0	.
chr2	127644166	127644167	chr2:127644167:A:G	rs6745343	A	G	A	Sox2_MA0143.3	7	1	-	9.800647049772198	9.206767037375712	CCTTTGTT
chr2	127644179	127644180	chr2:127644180:C:G	rs79149594	C	G	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr2	127652023	127652024	chr2:127652024:C:T	rs932123050	C	T	C	Sox2_MA0143.3	24	0	-	0	0	.
chr2	127652024	127652025	chr2:127652025:G:A	rs73954681	G	A	G	Sox2_MA0143.3	23	0	-	0	0	.
chr2	127656041	127656042	chr2:127656042:T:C	rs13394267	T	C	T	Sox2_MA0143.3	26	0	-	0	0	.
chr2	127664250	127664251	chr2:127664251:C:T	rs114827188	C	T	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr2	127664254	127664255	chr2:127664255:G:A	rs79110686	G	A	G	Sox2_MA0143.3	-12	0	+	0	0	.
chr2	127672240	127672241	chr2:127672241:T:C	rs147769511	T	C	T	Sox2_MA0143.3	2	1	-	9.613475778572903	3.494828071296623	CCATTGTT
chr2	127691326	127691327	chr2:127691327:T:C	rs6754610	T	C	C	Sox2_MA0143.3	10	0	-	0	0	.
chr2	127698789	127698790	chr2:127698790:G:A	rs66748015	G	A	g	Sox2_MA0143.3	-12	0	-	0	0	.
chr2	127722317	127722318	chr2:127722318:A:G	rs2405211	A	G	A	Sox2_MA0143.3	-15	0	-	0	0	.
chr2	127811281	127811282	chr2:127811282:C:T	rs546665961	C	T	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr2	127811291	127811292	chr2:127811292:G:A	rs566496420	G	A	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr2	127811320	127811321	chr2:127811321:C:T	rs535173856	C	T	C	Sox2_MA0143.3	25	0	+	0	0	.
chr2	127820623	127820624	chr2:127820624:G:A	rs4485514	G	A	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr2	127830139	127830140	chr2:127830140:C:T	rs74629747	C	T	C	Sox2_MA0143.3	0	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr2	128057984	128057985	chr2:128057985:C:T	rs71420822	C	T	C	Sox2_MA0143.3	-5	0	-	0	0	.
chr2	128058246	128058247	chr2:128058247:C:T	rs34129146	C	T	C	Sox2_MA0143.3	1	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr2	128237290	128237291	chr2:128237291:T:C	rs80000468	T	C	T	Sox2_MA0143.3	26	0	-	0	0	.
chr2	128263212	128263213	chr2:128263213:C:T	rs140078547	C	T	C	Sox2_MA0143.3	22	0	+	0	0	.
chr2	128306204	128306205	chr2:128306205:G:A	rs534491358	G	A	G	Sox2_MA0143.3	13	0	+	0	0	.
chr2	128396686	128396687	chr2:128396687:A:T	rs181725836	A	T	A	Sox2_MA0143.3	18	0	-	0	0	.
chr2	128410996	128410997	chr2:128410997:T:A	rs56173406	T	A	T	Sox2_MA0143.3	2	1	+	8.864090315184848	8.676919043985553	CCTTTGTG
chr2	128426416	128426417	chr2:128426417:C:T	rs66487805	C	T	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr2	128453545	128453546	chr2:128453546:C:T	rs4662822	C	T	T	Sox2_MA0143.3	14	0	+	0	0	.
chr2	128454645	128454646	chr2:128454646:A:G	rs13400362	A	G	A	Sox2_MA0143.3	13	0	-	0	0	.
chr2	128533227	128533228	chr2:128533228:C:T	rs113711639	C	T	C	Sox2_MA0143.3	8	0	+	0	0	.
chr2	128557958	128557959	chr2:128557959:G:A	rs2218014	G	A	G	Sox2_MA0143.3	1	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr2	128563514	128563515	chr2:128563515:C:T	rs78494791	C	T	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr2	128579700	128579701	chr2:128579701:A:G	rs10496670	A	G	A	Sox2_MA0143.3	24	0	+	0	0	.
chr2	128603494	128603495	chr2:128603495:G:A	rs73956801	G	A	G	Sox2_MA0143.3	19	0	+	0	0	.
chr2	128621469	128621470	chr2:128621470:A:G	rs116306896	A	G	A	Sox2_MA0143.3	-12	0	+	0	0	.
chr2	128633667	128633668	chr2:128633668:A:G	rs75454406	A	G	A	Sox2_MA0143.3	22	0	+	0	0	.
chr2	128694182	128694183	chr2:128694183:A:G	rs3845650	A	G	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr2	128706846	128706847	chr2:128706847:G:A	rs55905742	G	A	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr2	128753303	128753304	chr2:128753304:G:T	rs1317825	G	T	G	Sox2_MA0143.3	14	0	+	0	0	.
chr2	128771969	128771970	chr2:128771970:C:T	rs4662839	C	T	C	Sox2_MA0143.3	1	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr2	128805568	128805569	chr2:128805569:A:G	rs1898779	A	G	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr2	128813064	128813065	chr2:128813065:A:T	rs1317888	A	T	T	Sox2_MA0143.3	-9	0	-	0	0	.
chr2	128834161	128834162	chr2:128834162:C:T	rs34499171	C	T	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr2	128834197	128834198	chr2:128834198:G:A	rs6431034	G	A	A	Sox2_MA0143.3	24	0	+	0	0	.
chr2	128938914	128938915	chr2:128938915:T:G	rs1446648	T	G	T	Sox2_MA0143.3	25	0	-	0	0	.
chr2	129004840	129004841	chr2:129004841:G:A	rs80265110	G	A	A	Sox2_MA0143.3	14	0	+	0	0	.
chr2	129068838	129068839	chr2:129068839:A:C	rs11692464	A	C	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr2	129074762	129074763	chr2:129074763:C:A	rs79162774	C	A	C	Sox2_MA0143.3	5	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr2	129106842	129106843	chr2:129106843:G:A	rs56009990	G	A	A	Sox2_MA0143.3	26	0	+	0	0	.
chr2	129169403	129169404	chr2:129169404:A:C	rs1850828	A	C	A	Sox2_MA0143.3	16	0	+	0	0	.
chr2	129193155	129193156	chr2:129193156:A:G	rs58940217	A	G	A	Sox2_MA0143.3	-8	0	-	0	0	.
chr2	129290009	129290010	chr2:129290010:T:C	rs837856	T	C	T	Sox2_MA0143.3	-7	0	-	0	0	.
chr2	129318763	129318764	chr2:129318764:A:G	rs2083583	A	G	a	Sox2_MA0143.3	-12	0	+	0	0	.
chr2	129318771	129318772	chr2:129318772:G:A	rs2083584	G	A	g	Sox2_MA0143.3	-4	0	+	0	0	.
chr2	129318783	129318784	chr2:129318784:G:A	rs60099071	G	A	G	Sox2_MA0143.3	8	0	+	0	0	.
chr2	129324146	129324147	chr2:129324147:G:A	rs7601792	G	A	G	Sox2_MA0143.3	11	0	-	0	0	.
chr2	129432462	129432463	chr2:129432463:C:T	rs11685820	C	T	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr2	129465371	129465372	chr2:129465372:G:A	rs13394376	G	A	A	Sox2_MA0143.3	-13	0	+	0	0	.
chr2	129481694	129481695	chr2:129481695:T:C	rs62157324	T	C	T	Sox2_MA0143.3	6	1	+	8.676919043985553	1.7681642646703326	CCATTGTG
chr2	129499856	129499857	chr2:129499857:A:G	rs146090012	A	G	A	Sox2_MA0143.3	4	1	-	9.800647049772198	2.8918922704569785	CCTTTGTT
chr2	129635924	129635925	chr2:129635925:G:A	rs72853123	G	A	A	Sox2_MA0143.3	-19	0	+	0	0	.
chr2	129679864	129679865	chr2:129679865:A:C	rs4662658	A	C	C	Sox2_MA0143.3	12	0	-	0	0	.
chr2	129722621	129722622	chr2:129722622:C:G	rs6431105	C	G	C	Sox2_MA0143.3	9	0	+	0	0	.
chr2	129776707	129776708	chr2:129776708:T:C	rs7578253	T	C	C	Sox2_MA0143.3	24	0	+	0	0	.
chr2	129781893	129781894	chr2:129781894:A:G	rs3924460	A	G	a	Sox2_MA0143.3	13	0	+	0	0	.
chr2	129828813	129828814	chr2:129828814:G:A	rs2464991	G	A	A	Sox2_MA0143.3	-16	0	+	0	0	.
chr2	129875016	129875017	chr2:129875017:T:C	rs72985356	T	C	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr2	129907280	129907281	chr2:129907281:G:A	rs62156636	G	A	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr2	129921769	129921770	chr2:129921770:C:T	rs114262258	C	T	g	Sox2_MA0143.3	-15	0	-	0	0	.
chr2	130026227	130026228	chr2:130026228:T:A	rs11688565	T	A	.	Sox2_MA0143.3	17	0	-	0	0	.
chr2	130189463	130189464	chr2:130189464:A:G	rs13029827	A	G	.	Sox2_MA0143.3	-5	0	-	0	0	.
chr2	130195051	130195052	chr2:130195052:T:G	rs3863906	T	G	.	Sox2_MA0143.3	2	1	-	9.019595766176417	2.900948058900136	CCATTGTC
chr2	130241290	130241291	chr2:130241291:C:T	rs11885771	C	T	.	Sox2_MA0143.3	-16	0	+	0	0	.
chr2	130302972	130302973	chr2:130302973:G:A	rs11890495	G	A	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr2	130307880	130307881	chr2:130307881:T:C	rs10188300	T	C	C	Sox2_MA0143.3	3	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr2	130798485	130798486	chr2:130798486:G:A	chr2:130798486:G:A	G	A	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr2	130827563	130827564	chr2:130827564:A:G	rs2253155	A	G	A	Sox2_MA0143.3	2	1	+	9.613475778572903	3.494828071296623	CCATTGTT
chr2	130827581	130827582	chr2:130827582:C:T	rs575689920	C	T	C	Sox2_MA0143.3	20	0	+	0	0	.
chr2	130838930	130838931	chr2:130838931:C:G	rs12472354	C	G	C	Sox2_MA0143.3	0	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr2	130871160	130871161	chr2:130871161:C:A	rs114225037	C	A	C	Sox2_MA0143.3	9	0	-	0	0	.
chr2	130997614	130997615	chr2:130997615:A:G	rs11895351	A	G	A	Sox2_MA0143.3	13	0	+	0	0	.
chr2	131106678	131106679	chr2:131106679:T:G	rs147262766	T	G	T	Sox2_MA0143.3	-18	0	+	0	0	.
chr2	131404456	131404457	chr2:131404457:C:T	rs74982236	C	T	C	Sox2_MA0143.3	18	0	+	0	0	.
chr2	131413719	131413720	chr2:131413720:G:A	rs76282939	G	A	G	Sox2_MA0143.3	14	0	+	0	0	.
chr2	131451542	131451543	chr2:131451543:C:T	rs12478777	C	T	.	Sox2_MA0143.3	18	0	+	0	0	.
chr2	131482724	131482725	chr2:131482725:C:T	rs138292408	C	T	C	Sox2_MA0143.3	22	0	+	0	0	.
chr2	131485255	131485256	chr2:131485256:T:C	rs34939027	T	C	T	Sox2_MA0143.3	25	0	+	0	0	.
chr2	131493313	131493314	chr2:131493314:T:C	rs12691979	T	C	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr2	131536593	131536594	chr2:131536594:C:T	rs1231537019	C	T	.	Sox2_MA0143.3	-5	0	+	0	0	.
chr2	131813963	131813964	chr2:131813964:A:T	rs35089952	A	T	.	Sox2_MA0143.3	14	0	+	0	0	.
chr2	131817326	131817327	chr2:131817327:G:A	rs7425984	G	A	.	Sox2_MA0143.3	15	0	-	0	0	.
chr2	131835114	131835115	chr2:131835115:C:T	rs6753766	C	T	c	Sox2_MA0143.3	24	0	+	0	0	.
chr2	131930801	131930802	chr2:131930802:T:C	rs1290976	T	C	-	Sox2_MA0143.3	-12	0	+	0	0	.
chr2	132254537	132254538	chr2:132254538:T:C	rs13382851	T	C	.	Sox2_MA0143.3	-13	0	-	0	0	.
chr2	132267986	132267987	chr2:132267987:G:C	rs951898890	G	C	.	Sox2_MA0143.3	22	0	+	0	0	.
chr2	132440080	132440081	chr2:132440081:T:C	rs114220581	T	C	T	Sox2_MA0143.3	-9	0	-	0	0	.
chr2	132543050	132543051	chr2:132543051:T:C	rs3115031	T	C	T	Sox2_MA0143.3	23	0	+	0	0	.
chr2	132555757	132555758	chr2:132555758:G:A	rs4521100	G	A	G	Sox2_MA0143.3	22	0	-	0	0	.
chr2	132561462	132561463	chr2:132561463:T:C	rs3109143	T	C	C	Sox2_MA0143.3	6	1	+	9.206767037375712	2.298012258060492	CCTTTGTC
chr2	132564086	132564087	chr2:132564087:A:G	rs73957926	A	G	A	Sox2_MA0143.3	16	0	+	0	0	.
chr2	132565345	132565346	chr2:132565346:C:T	rs12624113	C	T	C	Sox2_MA0143.3	0	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr2	132627270	132627271	chr2:132627271:G:T	rs148194736	G	T	G	Sox2_MA0143.3	1	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr2	132697553	132697554	chr2:132697554:T:G	rs7591904	T	G	T	Sox2_MA0143.3	-4	0	+	0	0	.
chr2	132731827	132731828	chr2:132731828:A:G	rs17397142	A	G	A	Sox2_MA0143.3	-5	0	-	0	0	.
chr2	132768044	132768045	chr2:132768045:G:C	rs57643329	G	C	G	Sox2_MA0143.3	1	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr2	133135299	133135300	chr2:133135300:A:C	rs4954030	A	C	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr2	133284987	133284988	chr2:133284988:C:T	rs62180003	C	T	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr2	133306151	133306152	chr2:133306152:T:C	rs61334934	T	C	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr2	133359280	133359281	chr2:133359281:G:A	rs1865582	G	A	A	Sox2_MA0143.3	18	0	+	0	0	.
chr2	133435641	133435642	chr2:133435642:T:C	rs72846355	T	C	T	Sox2_MA0143.3	15	0	-	0	0	.
chr2	133497550	133497551	chr2:133497551:T:C	rs181644292	T	C	T	Sox2_MA0143.3	2	1	-	9.019595766176417	2.900948058900136	CCATTGTC
chr2	133519810	133519811	chr2:133519811:A:G	rs7569514	A	G	A	Sox2_MA0143.3	25	0	+	0	0	.
chr2	133683474	133683475	chr2:133683475:A:T	rs1901442	A	T	A	Sox2_MA0143.3	6	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr2	133768540	133768541	chr2:133768541:C:T	rs373305221	C	T	C	Sox2_MA0143.3	1	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr2	133787358	133787359	chr2:133787359:A:G	rs16829419	A	G	A	Sox2_MA0143.3	-7	0	-	0	0	.
chr2	133819906	133819907	chr2:133819907:A:T	rs17821087	A	T	A	Sox2_MA0143.3	-14	0	+	0	0	.
chr2	133878445	133878446	chr2:133878446:A:T	rs10188653	A	T	A	Sox2_MA0143.3	-5	0	-	0	0	.
chr2	133990069	133990070	chr2:133990070:T:C	rs114685528	T	C	C	Sox2_MA0143.3	2	1	-	9.019595766176417	2.900948058900136	CCATTGTC
chr2	134087513	134087514	chr2:134087514:T:C	rs764686	T	C	T	Sox2_MA0143.3	-6	0	-	0	0	.
chr2	134107624	134107625	chr2:134107625:T:C	rs1996589	T	C	C	Sox2_MA0143.3	14	0	-	0	0	.
chr2	134133975	134133976	chr2:134133976:A:G	rs192696605	A	G	A	Sox2_MA0143.3	3	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr2	134200369	134200370	chr2:134200370:T:C	rs28470737	T	C	T	Sox2_MA0143.3	14	0	+	0	0	.
chr2	134206320	134206321	chr2:134206321:A:G	rs1257168	A	G	G	Sox2_MA0143.3	18	0	-	0	0	.
chr2	134220564	134220565	chr2:134220565:C:A	rs73958170	C	A	C	Sox2_MA0143.3	10	0	+	0	0	.
chr2	134261986	134261987	chr2:134261987:C:G	rs62165735	C	G	C	Sox2_MA0143.3	1	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr2	134263128	134263129	chr2:134263129:A:G	rs3791268	A	G	G	Sox2_MA0143.3	18	0	-	0	0	.
chr2	134295014	134295015	chr2:134295015:A:C	rs4954127	A	C	C	Sox2_MA0143.3	17	0	+	0	0	.
chr2	134296486	134296487	chr2:134296487:A:G	rs2166736	A	G	A	Sox2_MA0143.3	24	0	+	0	0	.
chr2	134301920	134301921	chr2:134301921:C:A	rs16830372	C	A	A	Sox2_MA0143.3	24	0	+	0	0	.
chr2	134327545	134327546	chr2:134327546:T:C	rs11884948	T	C	T	Sox2_MA0143.3	-4	0	-	0	0	.
chr2	134401881	134401882	chr2:134401882:C:T	rs11884032	C	T	T	Sox2_MA0143.3	1	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr2	134461819	134461820	chr2:134461820:G:A	rs880109	G	A	G	Sox2_MA0143.3	17	0	-	0	0	.
chr2	134499363	134499364	chr2:134499364:A:G	rs17787563	A	G	G	Sox2_MA0143.3	23	0	+	0	0	.
chr2	134510683	134510684	chr2:134510684:C:T	rs749460	C	T	T	Sox2_MA0143.3	-10	0	-	0	0	.
chr2	134558533	134558534	chr2:134558534:G:A	rs1186541388	G	A	G	Sox2_MA0143.3	-12	0	+	0	0	.
chr2	134573181	134573182	chr2:134573182:G:C	rs12472186	G	C	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr2	134579620	134579621	chr2:134579621:G:T	rs17732597	G	T	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr2	134837996	134837997	chr2:134837997:T:C	rs16831109	T	C	T	Sox2_MA0143.3	-20	0	-	0	0	.
chr2	134870503	134870504	chr2:134870504:G:A	rs78930209	G	A	G	Sox2_MA0143.3	19	0	+	0	0	.
chr2	135043657	135043658	chr2:135043658:C:T	rs4954217	C	T	C	Sox2_MA0143.3	22	0	-	0	0	.
chr2	135095799	135095800	chr2:135095800:A:G	rs62170163	A	G	a	Sox2_MA0143.3	21	0	+	0	0	.
chr2	135403521	135403522	chr2:135403522:C:G	rs6709525	C	G	T	Sox2_MA0143.3	19	0	+	0	0	.
chr2	135728400	135728401	chr2:135728401:T:C	rs724326	T	C	T	Sox2_MA0143.3	-6	0	-	0	0	.
chr2	135782512	135782513	chr2:135782513:A:G	rs10496737	A	G	A	Sox2_MA0143.3	-8	0	-	0	0	.
chr2	135803986	135803987	chr2:135803987:G:A	rs2304371	G	A	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr2	135961357	135961358	chr2:135961358:T:C	rs116756668	T	C	T	Sox2_MA0143.3	3	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr2	135962773	135962774	chr2:135962774:G:T	rs3768998	G	T	G	Sox2_MA0143.3	27	0	-	0	0	.
chr2	136008380	136008381	chr2:136008381:T:C	rs309137	T	C	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr2	136025598	136025599	chr2:136025599:A:G	rs6714750	A	G	G	Sox2_MA0143.3	16	0	-	0	0	.
chr2	136052835	136052836	chr2:136052836:A:G	rs10496740	A	G	A	Sox2_MA0143.3	-18	0	-	0	0	.
chr2	136062505	136062506	chr2:136062506:C:T	rs11681248	C	T	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr2	136112302	136112303	chr2:136112303:G:A	rs2734871	G	A	A	Sox2_MA0143.3	-11	0	-	0	0	.
chr2	136119601	136119602	chr2:136119602:A:G	rs17848047	A	G	A	Sox2_MA0143.3	-16	0	+	0	0	.
chr2	136183383	136183384	chr2:136183384:G:A	rs16833240	G	A	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr2	136192812	136192813	chr2:136192813:G:A	rs6734803	G	A	G	Sox2_MA0143.3	17	0	-	0	0	.
chr2	136236175	136236176	chr2:136236176:C:T	rs10171574	C	T	C	Sox2_MA0143.3	27	0	-	0	0	.
chr2	136255624	136255625	chr2:136255625:A:G	rs9677195	A	G	A	Sox2_MA0143.3	3	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr2	136255647	136255648	chr2:136255648:A:G	rs35588901	A	G	A	Sox2_MA0143.3	-20	0	-	0	0	.
chr2	136301725	136301726	chr2:136301726:T:A	rs7587739	T	A	T	Sox2_MA0143.3	-18	0	+	0	0	.
chr2	136301740	136301741	chr2:136301741:T:C	rs77520910	T	C	T	Sox2_MA0143.3	-3	0	+	0	0	.
chr2	136324096	136324097	chr2:136324097:C:T	rs68190334	C	T	C	Sox2_MA0143.3	12	0	+	0	0	.
chr2	136326103	136326104	chr2:136326104:C:T	rs7602029	C	T	C	Sox2_MA0143.3	0	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr2	136326105	136326106	chr2:136326106:A:G	rs72847678	A	G	A	Sox2_MA0143.3	2	1	+	9.613475778572903	3.494828071296623	CCATTGTT
chr2	136359091	136359092	chr2:136359092:A:G	rs11679485	A	G	G	Sox2_MA0143.3	-3	0	-	0	0	.
chr2	137076287	137076288	chr2:137076288:G:A	rs62171246	G	A	-	Sox2_MA0143.3	1	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr2	137187302	137187303	chr2:137187303:A:C	rs13028427	A	C	A	Sox2_MA0143.3	6	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr2	137211990	137211991	chr2:137211991:A:C	rs10185044	A	C	A	Sox2_MA0143.3	13	0	-	0	0	.
chr2	137515306	137515307	chr2:137515307:G:A	rs115656177	G	A	A	Sox2_MA0143.3	-9	0	+	0	0	.
chr2	137587946	137587947	chr2:137587947:A:T	rs116540276	A	T	A	Sox2_MA0143.3	2	1	-	3.5547341015215945	3.3675628303222993	CCTTTGTA
chr2	137673926	137673927	chr2:137673927:C:T	rs1446227	C	T	C	Sox2_MA0143.3	27	0	-	0	0	.
chr2	137757662	137757663	chr2:137757663:A:G	rs554830050	A	G	A	Sox2_MA0143.3	2	1	+	9.613475778572903	3.494828071296623	CCATTGTT
chr2	137824726	137824727	chr2:137824727:C:T	rs4954543	C	T	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr2	137873585	137873586	chr2:137873586:T:C	rs17641865	T	C	T	Sox2_MA0143.3	-18	0	-	0	0	.
chr2	137874116	137874117	chr2:137874117:T:C	rs10928634	T	C	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr2	137964328	137964329	chr2:137964329:C:A	chr2:137964329:C:A	C	A	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr2	137964344	137964345	chr2:137964345:G:A	rs60444277	G	A	G	Sox2_MA0143.3	8	0	+	0	0	.
chr2	137987573	137987574	chr2:137987574:G:A	rs1349992	G	A	G	Sox2_MA0143.3	23	0	-	0	0	.
chr2	138262477	138262478	chr2:138262478:C:T	rs4954889	C	T	C	Sox2_MA0143.3	0	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr2	138274696	138274697	chr2:138274697:C:T	rs12478040	C	T	T	Sox2_MA0143.3	10	0	-	0	0	.
chr2	138365869	138365870	chr2:138365870:A:T	rs78059387	A	T	A	Sox2_MA0143.3	-16	0	+	0	0	.
chr2	138448353	138448354	chr2:138448354:T:C	rs4596033	T	C	T	Sox2_MA0143.3	-2	0	+	0	0	.
chr2	138503041	138503042	chr2:138503042:C:G	rs80058430	C	G	C	Sox2_MA0143.3	27	0	+	0	0	.
chr2	138724523	138724524	chr2:138724524:A:G	rs12691955	A	G	G	Sox2_MA0143.3	20	0	+	0	0	.
chr2	138761953	138761954	chr2:138761954:C:T	rs6430804	C	T	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr2	138860911	138860912	chr2:138860912:C:T	rs10165556	C	T	C	Sox2_MA0143.3	0	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr2	138866791	138866792	chr2:138866792:C:T	rs1351917	C	T	T	Sox2_MA0143.3	-9	0	+	0	0	.
chr2	138975484	138975485	chr2:138975485:A:T	rs6718034	A	T	T	Sox2_MA0143.3	26	0	-	0	0	.
chr2	139312166	139312167	chr2:139312167:A:G	rs4954763	A	G	A	Sox2_MA0143.3	16	0	+	0	0	.
chr2	139656504	139656505	chr2:139656505:T:A	rs67432173	T	A	T	Sox2_MA0143.3	18	0	+	0	0	.
chr2	139721493	139721494	chr2:139721494:G:A	rs76265929	G	A	G	Sox2_MA0143.3	-2	0	+	0	0	.
chr2	139787321	139787322	chr2:139787322:G:A	rs12987762	G	A	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr2	139805648	139805649	chr2:139805649:C:T	rs72896158	C	T	C	Sox2_MA0143.3	16	0	-	0	0	.
chr2	139865351	139865352	chr2:139865352:G:A	rs71413801	G	A	g	Sox2_MA0143.3	11	0	-	0	0	.
chr2	140015870	140015871	chr2:140015871:G:A	rs2049657	G	A	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr2	140308985	140308986	chr2:140308986:T:G	rs35000420	T	G	T	Sox2_MA0143.3	-6	0	+	0	0	.
chr2	140535894	140535895	chr2:140535895:C:G	rs6751750	C	G	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr2	140654819	140654820	chr2:140654820:C:T	rs76376181	C	T	A	Sox2_MA0143.3	-14	0	-	0	0	.
chr2	140759679	140759680	chr2:140759680:G:A	rs76160229	G	A	G	Sox2_MA0143.3	14	0	+	0	0	.
chr2	141021132	141021133	chr2:141021133:G:A	rs1525599	G	A	A	Sox2_MA0143.3	1	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr2	141021839	141021840	chr2:141021840:A:T	rs62173681	A	T	A	Sox2_MA0143.3	12	0	-	0	0	.
chr2	141041527	141041528	chr2:141041528:C:T	rs75492063	C	T	C	Sox2_MA0143.3	8	0	+	0	0	.
chr2	141041542	141041543	chr2:141041543:T:C	rs7599024	T	C	T	Sox2_MA0143.3	23	0	+	0	0	.
chr2	141137167	141137168	chr2:141137168:G:C	rs74467300	G	C	G	Sox2_MA0143.3	21	0	+	0	0	.
chr2	141385024	141385025	chr2:141385025:A:T	rs76424853	A	T	T	Sox2_MA0143.3	-1	0	+	0	0	.
chr2	141417927	141417928	chr2:141417928:C:T	rs62167982	C	T	T	Sox2_MA0143.3	-13	0	-	0	0	.
chr2	141463165	141463166	chr2:141463166:G:A	rs4605311	G	A	G	Sox2_MA0143.3	23	0	+	0	0	.
chr2	141479565	141479566	chr2:141479566:C:T	rs10204413	C	T	T	Sox2_MA0143.3	-1	0	+	0	0	.
chr2	141479588	141479589	chr2:141479589:T:C	rs10169745	T	C	T	Sox2_MA0143.3	22	0	+	0	0	.
chr2	141497062	141497063	chr2:141497063:T:G	rs13411463	T	G	T	Sox2_MA0143.3	14	0	-	0	0	.
chr2	142127722	142127723	chr2:142127723:T:C	rs1449486	T	C	c	Sox2_MA0143.3	8	0	+	0	0	.
chr2	142796333	142796334	chr2:142796334:G:A	rs147650995	G	A	G	Sox2_MA0143.3	12	0	-	0	0	.
chr2	142880448	142880449	chr2:142880449:T:C	rs73002098	T	C	T	Sox2_MA0143.3	22	0	+	0	0	.
chr2	142900162	142900163	chr2:142900163:G:A	rs4662306	G	A	g	Sox2_MA0143.3	14	0	-	0	0	.
chr2	142973674	142973675	chr2:142973675:T:C	rs6710765	T	C	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr2	142980549	142980550	chr2:142980550:G:A	rs62169913	G	A	G	Sox2_MA0143.3	15	0	-	0	0	.
chr2	143235368	143235369	chr2:143235369:C:G	rs6430014	C	G	G	Sox2_MA0143.3	20	0	-	0	0	.
chr2	143262145	143262146	chr2:143262146:A:G	rs968180866	A	G	A	Sox2_MA0143.3	-16	0	-	0	0	.
chr2	143295868	143295869	chr2:143295869:T:A	rs7601485	T	A	T	Sox2_MA0143.3	25	0	-	0	0	.
chr2	143529402	143529403	chr2:143529403:C:T	rs35016690	C	T	C	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr2	144134236	144134237	chr2:144134237:G:A	rs145657966	G	A	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr2	144230641	144230642	chr2:144230642:A:G	rs371184925	A	G	A	Sox2_MA0143.3	-10	0	+	0	0	.
chr2	144237759	144237760	chr2:144237760:C:T	rs77001246	C	T	C	Sox2_MA0143.3	26	0	+	0	0	.
chr2	144262236	144262237	chr2:144262237:G:A	rs77037167	G	A	G	Sox2_MA0143.3	0	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr2	144290471	144290472	chr2:144290472:T:C	rs139400353	T	C	T	Sox2_MA0143.3	11	0	+	0	0	.
chr2	144495161	144495162	chr2:144495162:T:G	rs6761789	T	G	T	Sox2_MA0143.3	-13	0	+	0	0	.
chr2	144523022	144523023	chr2:144523023:T:C	rs76412875	T	C	T	Sox2_MA0143.3	2	1	-	9.019595766176417	2.900948058900136	CCATTGTC
chr2	144523039	144523040	chr2:144523040:G:C	chr2:144523040:G:C	G	C	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr2	144530773	144530774	chr2:144530774:A:G	rs16823835	A	G	A	Sox2_MA0143.3	-11	0	-	0	0	.
chr2	144533410	144533411	chr2:144533411:A:G	rs4662375	A	G	G	Sox2_MA0143.3	2	1	-	9.800647049772198	3.494828071296623	CCTTTGTT
chr2	144745262	144745263	chr2:144745263:A:C	rs73963933	A	C	A	Sox2_MA0143.3	-14	0	-	0	0	.
chr2	144831035	144831036	chr2:144831036:A:G	rs13396130	A	G	A	Sox2_MA0143.3	13	0	-	0	0	.
chr2	144990778	144990779	chr2:144990779:A:G	rs13427617	A	G	A	Sox2_MA0143.3	-3	0	-	0	0	.
chr2	144998692	144998693	chr2:144998693:C:G	rs786244	C	G	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr2	145026774	145026775	chr2:145026775:G:A	rs2246245	G	A	A	Sox2_MA0143.3	-3	0	-	0	0	.
chr2	145049621	145049622	chr2:145049622:G:T	rs147793134	G	T	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr2	145157253	145157254	chr2:145157254:C:G	rs73962252	C	G	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr2	145320222	145320223	chr2:145320223:T:C	rs6722986	T	C	T	Sox2_MA0143.3	23	0	-	0	0	.
chr2	145381389	145381390	chr2:145381390:T:A	rs58110512	T	A	T	Sox2_MA0143.3	-16	0	-	0	0	.
chr2	145594467	145594468	chr2:145594468:A:C	rs7577837	A	C	C	Sox2_MA0143.3	7	1	-	9.800647049772198	8.864090315184848	CCTTTGTT
chr2	145597887	145597888	chr2:145597888:T:C	rs4662248	T	C	T	Sox2_MA0143.3	9	0	+	0	0	.
chr2	145752540	145752541	chr2:145752541:G:A	rs970146550	G	A	G	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr2	145759242	145759243	chr2:145759243:G:A	rs1437711	G	A	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr2	146243291	146243292	chr2:146243292:G:A	rs12464658	G	A	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr2	146579111	146579112	chr2:146579112:T:C	rs12615433	T	C	T	Sox2_MA0143.3	17	0	-	0	0	.
chr2	147033274	147033275	chr2:147033275:G:A	rs147250883	G	A	G	Sox2_MA0143.3	0	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr2	147125311	147125312	chr2:147125312:A:G	rs2264202	A	G	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr2	147182105	147182106	chr2:147182106:G:C	rs79972611	G	C	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr2	147550601	147550602	chr2:147550602:A:G	rs10208724	A	G	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr2	147560952	147560953	chr2:147560953:T:C	rs12464146	T	C	T	Sox2_MA0143.3	-18	0	-	0	0	.
chr2	147647336	147647337	chr2:147647337:C:A	rs73011961	C	A	C	Sox2_MA0143.3	8	0	-	0	0	.
chr2	147746245	147746246	chr2:147746246:T:G	rs4641882	T	G	T	Sox2_MA0143.3	11	0	-	0	0	.
chr2	147981503	147981504	chr2:147981504:G:C	rs73005154	G	C	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr2	148032160	148032161	chr2:148032161:G:T	rs11896010	G	T	G	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr2	148113263	148113264	chr2:148113264:T:C	rs113931321	T	C	T	Sox2_MA0143.3	26	0	+	0	0	.
chr2	148282433	148282434	chr2:148282434:T:C	rs73013057	T	C	T	Sox2_MA0143.3	-9	0	+	0	0	.
chr2	148336445	148336446	chr2:148336446:G:A	rs77522137	G	A	G	Sox2_MA0143.3	0	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr2	148568077	148568078	chr2:148568078:T:C	rs16828908	T	C	C	Sox2_MA0143.3	27	0	-	0	0	.
chr2	148659435	148659436	chr2:148659436:T:C	rs35148120	T	C	T	Sox2_MA0143.3	-19	0	-	0	0	.
chr2	148832735	148832736	chr2:148832736:T:G	rs944181903	T	G	T	Sox2_MA0143.3	-20	0	-	0	0	.
chr2	148885286	148885287	chr2:148885287:A:G	rs11894928	A	G	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr2	149019171	149019172	chr2:149019172:T:C	rs373920169	T	C	C	Sox2_MA0143.3	2	1	+	9.206767037375712	2.900948058900136	CCTTTGTC
chr2	149119490	149119491	chr2:149119491:C:T	rs114756382	C	T	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr2	149119513	149119514	chr2:149119514:G:C	rs16826575	G	C	G	Sox2_MA0143.3	5	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr2	149200328	149200329	chr2:149200329:C:T	rs10180648	C	T	C	Sox2_MA0143.3	14	0	+	0	0	.
chr2	149258926	149258927	chr2:149258927:G:A	rs72860940	G	A	G	Sox2_MA0143.3	24	0	+	0	0	.
chr2	149289817	149289818	chr2:149289818:T:C	rs76175921	T	C	T	Sox2_MA0143.3	-4	0	-	0	0	.
chr2	149442262	149442263	chr2:149442263:C:T	rs16826989	C	T	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr2	149490716	149490717	chr2:149490717:C:T	rs73966858	C	T	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr2	149585663	149585664	chr2:149585664:C:T	rs4233805	C	T	c	Sox2_MA0143.3	24	0	+	0	0	.
chr2	149653336	149653337	chr2:149653337:T:C	rs13030023	T	C	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr2	149748834	149748835	chr2:149748835:C:T	rs1641389	C	T	T	Sox2_MA0143.3	13	0	-	0	0	.
chr2	149902148	149902149	chr2:149902149:T:C	rs4013122	T	C	T	Sox2_MA0143.3	16	0	-	0	0	.
chr2	150064171	150064172	chr2:150064172:C:A	rs330618	C	A	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr2	150064576	150064577	chr2:150064577:A:G	rs330616	A	G	G	Sox2_MA0143.3	20	0	-	0	0	.
chr2	150097888	150097889	chr2:150097889:C:T	rs34392447	C	T	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr2	150168866	150168867	chr2:150168867:C:A	rs1374158	C	A	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr2	150182850	150182851	chr2:150182851:A:G	rs77163034	A	G	A	Sox2_MA0143.3	-12	0	+	0	0	.
chr2	150182888	150182889	chr2:150182889:C:T	rs140733158	C	T	C	Sox2_MA0143.3	26	0	+	0	0	.
chr2	150276537	150276538	chr2:150276538:C:A	rs145048421	C	A	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr2	150321246	150321247	chr2:150321247:G:A	rs74749038	G	A	A	Sox2_MA0143.3	11	0	-	0	0	.
chr2	150477506	150477507	chr2:150477507:C:G	rs13405196	C	G	C	Sox2_MA0143.3	1	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr2	150697395	150697396	chr2:150697396:C:T	rs13385759	C	T	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr2	150697807	150697808	chr2:150697808:C:T	rs79842849	C	T	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr2	150888696	150888697	chr2:150888697:T:C	rs4664202	T	C	T	Sox2_MA0143.3	-17	0	+	0	0	.
chr2	151040300	151040301	chr2:151040301:T:C	rs112368437	T	C	T	Sox2_MA0143.3	10	0	-	0	0	.
chr2	151334294	151334295	chr2:151334295:G:T	rs551780184	G	T	G	Sox2_MA0143.3	15	0	+	0	0	.
chr2	151409046	151409047	chr2:151409047:G:A	rs62169378	G	A	g	Sox2_MA0143.3	-1	0	+	0	0	.
chr2	151637703	151637704	chr2:151637704:A:G	rs59655785	A	G	G	Sox2_MA0143.3	-3	0	+	0	0	.
chr2	151729678	151729679	chr2:151729679:T:C	rs77846253	T	C	T	Sox2_MA0143.3	-3	0	-	0	0	.
chr2	151766717	151766718	chr2:151766718:C:A	rs79853758	C	A	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr2	151771362	151771363	chr2:151771363:T:A	rs558670163	T	A	T	Sox2_MA0143.3	9	0	+	0	0	.
chr2	151771566	151771567	chr2:151771567:C:A	chr2:151771567:C:A	C	A	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr2	151849803	151849804	chr2:151849804:T:G	rs6433680	T	G	T	Sox2_MA0143.3	24	0	+	0	0	.
chr2	152004746	152004747	chr2:152004747:A:G	rs115877416	A	G	A	Sox2_MA0143.3	3	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr2	152190068	152190069	chr2:152190069:G:A	rs150513139	G	A	G	Sox2_MA0143.3	20	0	+	0	0	.
chr2	152247459	152247460	chr2:152247460:T:A	chr2:152247460:T:A	T	A	T	Sox2_MA0143.3	6	1	+	9.206767037375712	2.298012258060492	CCTTTGTC
chr2	152335876	152335877	chr2:152335877:C:T	chr2:152335877:C:T	C	T	.	Sox2_MA0143.3	24	0	+	0	0	.
chr2	152348523	152348524	chr2:152348524:C:T	rs34424354	C	T	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr2	152348554	152348555	chr2:152348555:T:C	rs13401202	T	C	T	Sox2_MA0143.3	20	0	+	0	0	.
chr2	152370688	152370689	chr2:152370689:G:A	rs76381704	G	A	G	Sox2_MA0143.3	10	0	+	0	0	.
chr2	152413385	152413386	chr2:152413386:A:G	rs144755008	A	G	A	Sox2_MA0143.3	21	0	-	0	0	.
chr2	152415933	152415934	chr2:152415934:T:C	rs16831068	T	C	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr2	152421730	152421731	chr2:152421731:T:G	rs566402069	T	G	T	Sox2_MA0143.3	6	1	+	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr2	152422203	152422204	chr2:152422204:T:C	rs75167791	T	C	T	Sox2_MA0143.3	-13	0	-	0	0	.
chr2	152432539	152432540	chr2:152432540:T:C	rs75166890	T	C	T	Sox2_MA0143.3	14	0	+	0	0	.
chr2	152452758	152452759	chr2:152452759:G:C	rs114875179	G	C	G	Sox2_MA0143.3	8	0	+	0	0	.
chr2	152466643	152466644	chr2:152466644:A:C	rs1878632	A	C	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr2	152491042	152491043	chr2:152491043:G:A	rs187311475	G	A	G	Sox2_MA0143.3	18	0	+	0	0	.
chr2	152535186	152535187	chr2:152535187:A:G	rs60309166	A	G	A	Sox2_MA0143.3	10	0	+	0	0	.
chr2	152537232	152537233	chr2:152537233:C:T	rs2577182	C	T	C	Sox2_MA0143.3	24	0	-	0	0	.
chr2	152537251	152537252	chr2:152537252:C:G	rs2577181	C	G	G	Sox2_MA0143.3	5	1	-	8.676919043985553	1.7681642646703324	CCATTGTG
chr2	152542982	152542983	chr2:152542983:A:C	rs12614414	A	C	A	Sox2_MA0143.3	-7	0	-	0	0	.
chr2	152553213	152553214	chr2:152553214:A:G	rs6705986	A	G	A	Sox2_MA0143.3	-12	0	-	0	0	.
chr2	152561389	152561390	chr2:152561390:A:G	rs145332338	A	G	A	Sox2_MA0143.3	-15	0	+	0	0	.
chr2	152580638	152580639	chr2:152580639:G:C	rs16831413	G	C	G	Sox2_MA0143.3	20	0	+	0	0	.
chr2	152623342	152623343	chr2:152623343:G:A	rs6434128	G	A	G	Sox2_MA0143.3	13	0	+	0	0	.
chr2	152635245	152635246	chr2:152635246:G:A	rs11694512	G	A	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr2	152647727	152647728	chr2:152647728:C:T	rs890258030	C	T	C	Sox2_MA0143.3	0	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr2	152790739	152790740	chr2:152790740:G:A	rs10931290	G	A	G	Sox2_MA0143.3	12	0	-	0	0	.
chr2	152827009	152827010	chr2:152827010:A:G	rs12621161	A	G	G	Sox2_MA0143.3	20	0	-	0	0	.
chr2	152876336	152876337	chr2:152876337:A:G	rs12464366	A	G	A	Sox2_MA0143.3	-2	0	+	0	0	.
chr2	153074422	153074423	chr2:153074423:A:G	rs1119762	A	G	G	Sox2_MA0143.3	4	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr2	153099231	153099232	chr2:153099232:A:C	rs62179580	A	C	A	Sox2_MA0143.3	-5	0	+	0	0	.
chr2	153197029	153197030	chr2:153197030:G:A	rs6729853	G	A	A	Sox2_MA0143.3	-9	0	-	0	0	.
chr2	153348924	153348925	chr2:153348925:G:C	rs1921774	G	C	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr2	153461780	153461781	chr2:153461781:C:A	rs11692573	C	A	A	Sox2_MA0143.3	11	0	-	0	0	.
chr2	153476362	153476363	chr2:153476363:T:C	rs60565585	T	C	T	Sox2_MA0143.3	13	0	+	0	0	.
chr2	153567447	153567448	chr2:153567448:G:A	rs766767	G	A	g	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr2	153584638	153584639	chr2:153584639:T:C	rs575118984	T	C	T	Sox2_MA0143.3	27	0	-	0	0	.
chr2	153881124	153881125	chr2:153881125:G:A	rs1444684	G	A	A	Sox2_MA0143.3	18	0	+	0	0	.
chr2	154089512	154089513	chr2:154089513:G:T	rs7587580	G	T	G	Sox2_MA0143.3	8	0	+	0	0	.
chr2	154120888	154120889	chr2:154120889:T:G	rs147631038	T	G	T	Sox2_MA0143.3	-11	0	+	0	0	.
chr2	154365707	154365708	chr2:154365708:A:G	rs17838576	A	G	G	Sox2_MA0143.3	-3	0	+	0	0	.
chr2	154722266	154722267	chr2:154722267:A:G	rs3106651	A	G	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr2	154739474	154739475	chr2:154739475:C:T	rs115100820	C	T	C	Sox2_MA0143.3	-20	0	-	0	0	.
chr2	154952455	154952456	chr2:154952456:G:C	rs190112659	G	C	G	Sox2_MA0143.3	10	0	-	0	0	.
chr2	155404797	155404798	chr2:155404798:A:C	rs1601527	A	C	C	Sox2_MA0143.3	17	0	+	0	0	.
chr2	155404800	155404801	chr2:155404801:A:G	rs192127313	A	G	a	Sox2_MA0143.3	20	0	+	0	0	.
chr2	155819227	155819228	chr2:155819228:T:C	rs1607362	T	C	C	Sox2_MA0143.3	4	1	+	8.864090315184848	1.9553355358696274	CCTTTGTG
chr2	155949549	155949550	chr2:155949550:A:C	rs144108977	A	C	A	Sox2_MA0143.3	6	1	-	9.613475778572903	2.7047209992576837	CCATTGTT
chr2	156190720	156190721	chr2:156190721:T:C	rs75843043	T	C	T	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr2	156216853	156216854	chr2:156216854:G:C	rs4664203	G	C	G	Sox2_MA0143.3	27	0	-	0	0	.
chr2	156332695	156332696	chr2:156332696:C:G	chr2:156332696:C:G	C	G	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr2	156332723	156332724	chr2:156332724:G:C	chr2:156332724:G:C	G	C	G	Sox2_MA0143.3	20	0	+	0	0	.
chr2	156342414	156342415	chr2:156342415:G:A	rs1209186855	G	A	G	Sox2_MA0143.3	-2	0	+	0	0	.
chr2	156380466	156380467	chr2:156380467:C:T	rs79853719	C	T	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr2	156380468	156380469	chr2:156380469:C:T	rs78734358	C	T	C	Sox2_MA0143.3	-5	0	-	0	0	.
chr2	156455449	156455450	chr2:156455450:A:T	rs116332317	A	T	A	Sox2_MA0143.3	23	0	+	0	0	.
chr2	156460951	156460952	chr2:156460952:T:C	rs548516	T	C	T	Sox2_MA0143.3	16	0	+	0	0	.
chr2	157193104	157193105	chr2:157193105:A:C	rs77977860	A	C	A	Sox2_MA0143.3	-14	0	-	0	0	.
chr2	157497600	157497601	chr2:157497601:T:C	rs6721154	T	C	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr2	157784610	157784611	chr2:157784611:G:A	rs62175460	G	A	G	Sox2_MA0143.3	25	0	+	0	0	.
chr2	157785523	157785524	chr2:157785524:G:A	rs73023347	G	A	G	Sox2_MA0143.3	1	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr2	157834050	157834051	chr2:157834051:T:C	rs28637949	T	C	T	Sox2_MA0143.3	7	1	-	3.5547341015215945	8.864090315184848	CCTTTGTA
chr2	157878354	157878355	chr2:157878355:T:A	rs1812399	T	A	T	Sox2_MA0143.3	-11	0	-	0	0	.
chr2	157949925	157949926	chr2:157949926:G:A	rs7566184	G	A	A	Sox2_MA0143.3	5	1	+	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr2	157971552	157971553	chr2:157971553:T:A	rs6750852	T	A	A	Sox2_MA0143.3	-11	0	+	0	0	.
chr2	158099916	158099917	chr2:158099917:T:C	rs114722978	T	C	T	Sox2_MA0143.3	-14	0	+	0	0	.
chr2	158099941	158099942	chr2:158099942:A:G	rs371495952	A	G	A	Sox2_MA0143.3	11	0	+	0	0	.
chr2	158099955	158099956	chr2:158099956:C:T	rs76195130	C	T	C	Sox2_MA0143.3	25	0	+	0	0	.
chr2	158099957	158099958	chr2:158099958:A:G	rs6746349	A	G	G	Sox2_MA0143.3	27	0	+	0	0	.
chr2	158303369	158303370	chr2:158303370:T:C	rs4422120	T	C	T	Sox2_MA0143.3	22	0	+	0	0	.
chr2	158381005	158381006	chr2:158381006:T:C	rs76037969	T	C	T	Sox2_MA0143.3	24	0	-	0	0	.
chr2	158512923	158512924	chr2:158512924:C:T	rs145194898	C	T	C	Sox2_MA0143.3	1	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr2	158647244	158647245	chr2:158647245:G:A	rs2711068	G	A	g	Sox2_MA0143.3	13	0	+	0	0	.
chr2	158647245	158647246	chr2:158647246:G:C	rs2711067	G	C	G	Sox2_MA0143.3	14	0	+	0	0	.
chr2	158649887	158649888	chr2:158649888:G:A	rs2711065	G	A	A	Sox2_MA0143.3	-13	0	+	0	0	.
chr2	158716055	158716056	chr2:158716056:C:T	rs6745896	C	T	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr2	158731374	158731375	chr2:158731375:C:T	rs56111100	C	T	C	Sox2_MA0143.3	23	0	-	0	0	.
chr2	158739586	158739587	chr2:158739587:C:A	rs74809546	C	A	C	Sox2_MA0143.3	14	0	-	0	0	.
chr2	158739601	158739602	chr2:158739602:C:A	rs115752472	C	A	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr2	158745599	158745600	chr2:158745600:C:A	rs75955346	C	A	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr2	158746678	158746679	chr2:158746679:A:G	rs16843299	A	G	A	Sox2_MA0143.3	-18	0	+	0	0	.
chr2	158868538	158868539	chr2:158868539:T:G	rs11684095	T	G	t	Sox2_MA0143.3	2	1	+	3.5547341015215945	-2.751084876953981	CCTTTGTA
chr2	159056190	159056191	chr2:159056191:A:G	rs34834895	A	G	A	Sox2_MA0143.3	4	1	-	8.864090315184848	1.9553355358696274	CCTTTGTG
chr2	159089209	159089210	chr2:159089210:C:T	rs34163930	C	T	T	Sox2_MA0143.3	-5	0	-	0	0	.
chr2	159185481	159185482	chr2:159185482:C:T	rs17494000	C	T	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr2	159185488	159185489	chr2:159185489:C:A	chr2:159185489:C:A	C	A	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr2	159185761	159185762	chr2:159185762:G:A	rs78921157	G	A	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr2	159204917	159204918	chr2:159204918:A:G	rs4233678	A	G	G	Sox2_MA0143.3	14	0	+	0	0	.
chr2	159285365	159285366	chr2:159285366:T:C	rs12469406	T	C	T	Sox2_MA0143.3	-8	0	+	0	0	.
chr2	159285394	159285395	chr2:159285395:C:T	rs6718625	C	T	T	Sox2_MA0143.3	21	0	+	0	0	.
chr2	159300905	159300906	chr2:159300906:G:A	rs6758637	G	A	G	Sox2_MA0143.3	21	0	-	0	0	.
chr2	159609129	159609130	chr2:159609130:A:C	rs73010636	A	C	A	Sox2_MA0143.3	4	1	-	8.864090315184848	1.9553355358696274	CCTTTGTG
chr2	159711077	159711078	chr2:159711078:G:T	rs1006192	G	T	G	Sox2_MA0143.3	27	0	-	0	0	.
chr2	159712529	159712530	chr2:159712530:G:T	rs556693167	G	T	G	Sox2_MA0143.3	-9	0	+	0	0	.
chr2	159712555	159712556	chr2:159712556:C:G	rs117626556	C	G	C	Sox2_MA0143.3	17	0	+	0	0	.
chr2	159738953	159738954	chr2:159738954:T:C	rs2357530	T	C	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr2	159905276	159905277	chr2:159905277:G:T	rs6748819	G	T	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr2	160010547	160010548	chr2:160010548:G:A	rs2667011	G	A	A	Sox2_MA0143.3	25	0	+	0	0	.
chr2	160058037	160058038	chr2:160058038:T:C	rs11901391	T	C	T	Sox2_MA0143.3	22	0	+	0	0	.
chr2	160180809	160180810	chr2:160180810:G:A	rs34997211	G	A	G	Sox2_MA0143.3	11	0	-	0	0	.
chr2	160255323	160255324	chr2:160255324:G:T	rs144310559	G	T	A	Sox2_MA0143.3	-11	0	-	0	0	.
chr2	160270506	160270507	chr2:160270507:G:A	rs112727731	G	A	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr2	160270515	160270516	chr2:160270516:A:T	rs77074496	A	T	A	Sox2_MA0143.3	-10	0	+	0	0	.
chr2	160293682	160293683	chr2:160293683:T:C	rs918845136	T	C	T	Sox2_MA0143.3	26	0	+	0	0	.
chr2	160309070	160309071	chr2:160309071:C:T	rs79054495	C	T	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr2	160318181	160318182	chr2:160318182:C:T	rs1430	C	T	c	Sox2_MA0143.3	-20	0	+	0	0	.
chr2	160324395	160324396	chr2:160324396:G:A	rs371835628	G	A	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr2	160363614	160363615	chr2:160363615:A:C	rs6755940	A	C	A	Sox2_MA0143.3	15	0	-	0	0	.
chr2	160407426	160407427	chr2:160407427:C:T	rs577168998	C	T	C	Sox2_MA0143.3	18	0	+	0	0	.
chr2	160419866	160419867	chr2:160419867:G:A	rs7424771	G	A	G	Sox2_MA0143.3	1	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr2	160500068	160500069	chr2:160500069:C:A	rs139148899	C	A	C	Sox2_MA0143.3	27	0	+	0	0	.
chr2	160522532	160522533	chr2:160522533:C:T	rs79527921	C	T	C	Sox2_MA0143.3	15	0	+	0	0	.
chr2	160736945	160736946	chr2:160736946:A:G	rs146667793	A	G	A	Sox2_MA0143.3	3	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr2	160912296	160912297	chr2:160912297:G:C	rs1022334	G	C	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr2	160912941	160912942	chr2:160912942:C:T	rs1516098	C	T	T	Sox2_MA0143.3	-4	0	-	0	0	.
chr2	160928694	160928695	chr2:160928695:C:T	rs1710625	C	T	T	Sox2_MA0143.3	-20	0	+	0	0	.
chr2	160970066	160970067	chr2:160970067:C:T	rs76674486	C	T	C	Sox2_MA0143.3	1	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr2	160994682	160994683	chr2:160994683:C:T	rs774615503	C	T	C	Sox2_MA0143.3	-12	0	-	0	0	.
chr2	161063714	161063715	chr2:161063715:C:T	rs536984256	C	T	C	Sox2_MA0143.3	18	0	-	0	0	.
chr2	161085202	161085203	chr2:161085203:T:C	rs13429707	T	C	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr2	161137018	161137019	chr2:161137019:A:G	rs73013291	A	G	A	Sox2_MA0143.3	21	0	-	0	0	.
chr2	161137024	161137025	chr2:161137025:G:A	rs115052720	G	A	G	Sox2_MA0143.3	15	0	-	0	0	.
chr2	161137210	161137211	chr2:161137211:G:A	rs58125002	G	A	G	Sox2_MA0143.3	14	0	+	0	0	.
chr2	161413263	161413264	chr2:161413264:G:T	rs62188139	G	T	G	Sox2_MA0143.3	-12	0	+	0	0	.
chr2	161418335	161418336	chr2:161418336:G:C	rs116175783	G	C	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr2	161426957	161426958	chr2:161426958:G:A	rs56152608	G	A	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr2	161966268	161966269	chr2:161966269:A:C	rs11901687	A	C	A	Sox2_MA0143.3	-15	0	-	0	0	.
chr2	162073411	162073412	chr2:162073412:C:T	rs17575	C	T	C	Sox2_MA0143.3	11	0	+	0	0	.
chr2	162093032	162093033	chr2:162093033:T:A	chr2:162093033:T:A	T	A	T	Sox2_MA0143.3	14	0	+	0	0	.
chr2	162100899	162100900	chr2:162100900:C:T	rs72870425	C	T	C	Sox2_MA0143.3	16	0	+	0	0	.
chr2	162114140	162114141	chr2:162114141:G:T	rs2080713	G	T	G	Sox2_MA0143.3	9	0	-	0	0	.
chr2	162118992	162118993	chr2:162118993:G:T	rs10171915	G	T	G	Sox2_MA0143.3	23	0	-	0	0	.
chr2	162232495	162232496	chr2:162232496:G:T	rs35701596	G	T	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr2	162865411	162865412	chr2:162865412:G:A	rs10168652	G	A	-	Sox2_MA0143.3	-1	0	+	0	0	.
chr2	162982991	162982992	chr2:162982992:T:C	rs6741514	T	C	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr2	162989828	162989829	chr2:162989829:A:G	rs7563268	A	G	A	Sox2_MA0143.3	9	0	+	0	0	.
chr2	162993534	162993535	chr2:162993535:T:C	rs74680571	T	C	T	Sox2_MA0143.3	21	0	+	0	0	.
chr2	163077743	163077744	chr2:163077744:C:T	rs11883494	C	T	T	Sox2_MA0143.3	5	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr2	163205923	163205924	chr2:163205924:C:T	rs2036524	C	T	T	Sox2_MA0143.3	-4	0	-	0	0	.
chr2	163708452	163708453	chr2:163708453:T:C	rs16848818	T	C	T	Sox2_MA0143.3	9	0	-	0	0	.
chr2	163828651	163828652	chr2:163828652:G:T	rs149677661	G	T	G	Sox2_MA0143.3	-9	0	+	0	0	.
chr2	164303368	164303369	chr2:164303369:T:C	rs34320362	T	C	T	Sox2_MA0143.3	9	0	-	0	0	.
chr2	164523250	164523251	chr2:164523251:A:C	rs13027325	A	C	A	Sox2_MA0143.3	18	0	-	0	0	.
chr2	164761545	164761546	chr2:164761546:G:A	rs355834	G	A	A	Sox2_MA0143.3	12	0	-	0	0	.
chr2	164793857	164793858	chr2:164793858:G:A	rs11901922	G	A	G	Sox2_MA0143.3	18	0	+	0	0	.
chr2	164840871	164840872	chr2:164840872:A:G	rs545028153	A	G	A	Sox2_MA0143.3	11	0	+	0	0	.
chr2	164846302	164846303	chr2:164846303:G:A	rs355823	G	A	G	Sox2_MA0143.3	23	0	-	0	0	.
chr2	164882717	164882718	chr2:164882718:G:A	rs180852790	G	A	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr2	164882725	164882726	chr2:164882726:T:C	rs17437914	T	C	T	Sox2_MA0143.3	-11	0	+	0	0	.
chr2	164935221	164935222	chr2:164935222:T:C	rs3067	T	C	T	Sox2_MA0143.3	10	0	+	0	0	.
chr2	165142090	165142091	chr2:165142091:C:G	rs78969510	C	G	C	Sox2_MA0143.3	11	0	-	0	0	.
chr2	165162110	165162111	chr2:165162111:A:G	rs978151068	A	G	A	Sox2_MA0143.3	2	1	-	8.864090315184848	2.5582713367092715	CCTTTGTG
chr2	165258441	165258442	chr2:165258442:G:A	rs2892943	G	A	g	Sox2_MA0143.3	19	0	+	0	0	.
chr2	165320869	165320870	chr2:165320870:C:G	rs11674103	C	G	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr2	165350831	165350832	chr2:165350832:C:T	rs16850454	C	T	C	Sox2_MA0143.3	16	0	-	0	0	.
chr2	165369502	165369503	chr2:165369503:C:T	rs1368236	C	T	C	Sox2_MA0143.3	22	0	+	0	0	.
chr2	165401430	165401431	chr2:165401431:A:G	rs6705474	A	G	A	Sox2_MA0143.3	4	1	-	8.864090315184848	1.9553355358696274	CCTTTGTG
chr2	165435016	165435017	chr2:165435017:A:T	rs1006296611	A	T	A	Sox2_MA0143.3	8	0	+	0	0	.
chr2	165470377	165470378	chr2:165470378:G:A	rs10497261	G	A	A	Sox2_MA0143.3	0	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr2	165568141	165568142	chr2:165568142:T:C	rs921683	T	C	T	Sox2_MA0143.3	-5	0	+	0	0	.
chr2	165837974	165837975	chr2:165837975:G:A	rs1432275	G	A	G	Sox2_MA0143.3	23	0	-	0	0	.
chr2	165837975	165837976	chr2:165837976:C:T	rs1432276	C	T	C	Sox2_MA0143.3	22	0	-	0	0	.
chr2	165838007	165838008	chr2:165838008:T:C	rs58562881	T	C	T	Sox2_MA0143.3	-10	0	-	0	0	.
chr2	165838017	165838018	chr2:165838018:C:A	rs16851124	C	A	C	Sox2_MA0143.3	-20	0	-	0	0	.
chr2	166067302	166067303	chr2:166067303:A:G	rs10208454	A	G	A	Sox2_MA0143.3	21	0	-	0	0	.
chr2	166084288	166084289	chr2:166084289:T:C	rs60055328	T	C	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr2	166084318	166084319	chr2:166084319:A:G	rs10497280	A	G	A	Sox2_MA0143.3	16	0	+	0	0	.
chr2	166091145	166091146	chr2:166091146:A:C	rs114688154	A	C	A	Sox2_MA0143.3	-17	0	-	0	0	.
chr2	166314895	166314896	chr2:166314896:T:G	rs6718791	T	G	G	Sox2_MA0143.3	-9	0	+	0	0	.
chr2	166410620	166410621	chr2:166410621:G:C	rs13027893	G	C	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr2	166411328	166411329	chr2:166411329:A:T	rs112697228	A	T	A	Sox2_MA0143.3	12	0	+	0	0	.
chr2	166436521	166436522	chr2:166436522:T:C	rs4476364	T	C	T	Sox2_MA0143.3	2	1	-	9.019595766176417	2.900948058900136	CCATTGTC
chr2	166499743	166499744	chr2:166499744:A:G	rs12479266	A	G	A	Sox2_MA0143.3	2	1	-	3.5547341015215945	-2.751084876953981	CCTTTGTA
chr2	166592642	166592643	chr2:166592643:T:C	rs56836235	T	C	T	Sox2_MA0143.3	22	0	+	0	0	.
chr2	166793026	166793027	chr2:166793027:T:C	rs12993796	T	C	t	Sox2_MA0143.3	6	1	+	8.676919043985553	1.7681642646703326	CCATTGTG
chr2	166795952	166795953	chr2:166795953:G:A	rs2390485	G	A	A	Sox2_MA0143.3	26	0	+	0	0	.
chr2	167040670	167040671	chr2:167040671:C:T	rs78583295	C	T	G	Sox2_MA0143.3	18	0	+	0	0	.
chr2	167103526	167103527	chr2:167103527:T:A	rs749791404	T	A	T	Sox2_MA0143.3	3	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr2	167143004	167143005	chr2:167143005:G:A	rs143927842	G	A	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr2	167259258	167259259	chr2:167259259:G:C	rs16853344	G	C	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr2	167259286	167259287	chr2:167259287:G:C	rs75758327	G	C	G	Sox2_MA0143.3	13	0	+	0	0	.
chr2	167287393	167287394	chr2:167287394:G:A	rs60988732	G	A	G	Sox2_MA0143.3	1	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr2	167290087	167290088	chr2:167290088:G:A	rs141229148	G	A	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr2	167290125	167290126	chr2:167290126:A:C	rs77440040	A	C	A	Sox2_MA0143.3	20	0	+	0	0	.
chr2	167651884	167651885	chr2:167651885:A:C	rs16854016	A	C	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr2	167681840	167681841	chr2:167681841:T:G	rs2029084	T	G	T	Sox2_MA0143.3	2	1	+	9.206767037375712	2.900948058900136	CCTTTGTC
chr2	167688265	167688266	chr2:167688266:A:C	rs7605048	A	C	A	Sox2_MA0143.3	13	0	+	0	0	.
chr2	167701635	167701636	chr2:167701636:T:C	rs6718232	T	C	T	Sox2_MA0143.3	2	1	+	9.800647049772198	3.494828071296623	CCTTTGTT
chr2	167713947	167713948	chr2:167713948:T:C	rs13412132	T	C	T	Sox2_MA0143.3	16	0	-	0	0	.
chr2	167758658	167758659	chr2:167758659:C:T	rs10930283	C	T	C	Sox2_MA0143.3	21	0	+	0	0	.
chr2	167901541	167901542	chr2:167901542:C:G	rs4553785	C	G	G	Sox2_MA0143.3	5	1	-	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr2	167980696	167980697	chr2:167980697:G:A	rs6734516	G	A	A	Sox2_MA0143.3	11	0	+	0	0	.
chr2	168029683	168029684	chr2:168029684:G:C	rs4667548	G	C	G	Sox2_MA0143.3	1	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr2	168035907	168035908	chr2:168035908:C:T	rs9789702	C	T	C	Sox2_MA0143.3	18	0	-	0	0	.
chr2	168119659	168119660	chr2:168119660:C:T	rs7603464	C	T	C	Sox2_MA0143.3	19	0	-	0	0	.
chr2	168132832	168132833	chr2:168132833:T:C	rs3769412	T	C	T	Sox2_MA0143.3	10	0	+	0	0	.
chr2	168153054	168153055	chr2:168153055:A:G	rs10170500	A	G	A	Sox2_MA0143.3	12	0	+	0	0	.
chr2	168166965	168166966	chr2:168166966:A:G	rs13022764	A	G	A	Sox2_MA0143.3	4	1	-	9.800647049772198	2.8918922704569785	CCTTTGTT
chr2	168179790	168179791	chr2:168179791:G:A	rs10183957	G	A	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr2	168221251	168221252	chr2:168221252:G:A	rs772884269	G	A	G	Sox2_MA0143.3	15	0	+	0	0	.
chr2	168295157	168295158	chr2:168295158:A:T	rs56285833	A	T	A	Sox2_MA0143.3	11	0	+	0	0	.
chr2	168346886	168346887	chr2:168346887:G:A	rs538354529	G	A	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr2	168405814	168405815	chr2:168405815:A:G	rs12618834	A	G	A	Sox2_MA0143.3	-17	0	-	0	0	.
chr2	168438640	168438641	chr2:168438641:A:G	rs2601094	A	G	A	Sox2_MA0143.3	-2	0	+	0	0	.
chr2	168494736	168494737	chr2:168494737:G:C	rs72873095	G	C	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr2	168520104	168520105	chr2:168520105:T:G	rs112802295	T	G	T	Sox2_MA0143.3	-13	0	+	0	0	.
chr2	168520110	168520111	chr2:168520111:A:G	rs10175250	A	G	A	Sox2_MA0143.3	-7	0	+	0	0	.
chr2	168613711	168613712	chr2:168613712:A:G	rs144783876	A	G	A	Sox2_MA0143.3	2	1	+	9.613475778572903	3.494828071296623	CCATTGTT
chr2	168644422	168644423	chr2:168644423:G:T	rs1863147	G	T	T	Sox2_MA0143.3	-2	0	-	0	0	.
chr2	168666535	168666536	chr2:168666536:T:G	rs4668097	T	G	g	Sox2_MA0143.3	10	0	+	0	0	.
chr2	168705672	168705673	chr2:168705673:G:A	rs183020078	G	A	G	Sox2_MA0143.3	14	0	+	0	0	.
chr2	168913738	168913739	chr2:168913739:G:A	rs75578260	G	A	G	Sox2_MA0143.3	0	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr2	168961863	168961864	chr2:168961864:G:T	chr2:168961864:G:T	G	T	G	Sox2_MA0143.3	27	0	+	0	0	.
chr2	169036812	169036813	chr2:169036813:C:A	rs143627656	C	A	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr2	169083257	169083258	chr2:169083258:G:T	rs573176029	G	T	G	Sox2_MA0143.3	18	0	+	0	0	.
chr2	169112712	169112713	chr2:169112713:T:C	rs62172561	T	C	T	Sox2_MA0143.3	17	0	+	0	0	.
chr2	169173289	169173290	chr2:169173290:T:C	rs17848190	T	C	T	Sox2_MA0143.3	11	0	+	0	0	.
chr2	169193093	169193094	chr2:169193094:C:T	rs3821125	C	T	T	Sox2_MA0143.3	-5	0	-	0	0	.
chr2	169197731	169197732	chr2:169197732:G:A	rs16856596	G	A	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr2	169476731	169476732	chr2:169476732:C:A	rs12615227	C	A	C	Sox2_MA0143.3	15	0	+	0	0	.
chr2	169478085	169478086	chr2:169478086:C:T	rs76545704	C	T	C	Sox2_MA0143.3	25	0	-	0	0	.
chr2	169505414	169505415	chr2:169505415:C:G	rs1024976159	C	G	-	Sox2_MA0143.3	1	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr2	169511927	169511928	chr2:169511928:C:T	rs3769771	C	T	C	Sox2_MA0143.3	1	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr2	169703313	169703314	chr2:169703314:G:T	rs1374466	G	T	T	Sox2_MA0143.3	-2	0	-	0	0	.
chr2	169726261	169726262	chr2:169726262:C:T	rs59224076	C	T	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr2	169767249	169767250	chr2:169767250:A:G	rs36124041	A	G	A	Sox2_MA0143.3	-11	0	-	0	0	.
chr2	169789855	169789856	chr2:169789856:T:A	rs184597664	T	A	T	Sox2_MA0143.3	-19	0	-	0	0	.
chr2	169794320	169794321	chr2:169794321:A:T	rs1005755	A	T	A	Sox2_MA0143.3	-6	0	+	0	0	.
chr2	169815955	169815956	chr2:169815956:G:C	rs115193235	G	C	G	Sox2_MA0143.3	23	0	+	0	0	.
chr2	169819216	169819217	chr2:169819217:A:C	rs150920627	A	C	A	Sox2_MA0143.3	22	0	-	0	0	.
chr2	169819254	169819255	chr2:169819255:C:T	rs3769769	C	T	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr2	169965667	169965668	chr2:169965668:A:G	rs138684577	A	G	A	Sox2_MA0143.3	6	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr2	169966687	169966688	chr2:169966688:A:G	rs13019671	A	G	G	Sox2_MA0143.3	25	0	-	0	0	.
chr2	170010877	170010878	chr2:170010878:A:G	rs73019523	A	G	A	Sox2_MA0143.3	6	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr2	170076513	170076514	chr2:170076514:G:C	rs10930397	G	C	C	Sox2_MA0143.3	11	0	+	0	0	.
chr2	170110827	170110828	chr2:170110828:G:C	rs10208548	G	C	G	Sox2_MA0143.3	0	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr2	170141610	170141611	chr2:170141611:C:T	rs4668205	C	T	C	Sox2_MA0143.3	18	0	-	0	0	.
chr2	170170166	170170167	chr2:170170167:T:A	rs7572650	T	A	T	Sox2_MA0143.3	22	0	+	0	0	.
chr2	170176990	170176991	chr2:170176991:T:C	rs1035629	T	C	T	Sox2_MA0143.3	-7	0	-	0	0	.
chr2	170214573	170214574	chr2:170214574:G:A	chr2:170214574:G:A	G	A	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr2	170492240	170492241	chr2:170492241:T:C	rs11895735	T	C	C	Sox2_MA0143.3	26	0	+	0	0	.
chr2	170505331	170505332	chr2:170505332:G:A	rs78202288	G	A	G	Sox2_MA0143.3	22	0	-	0	0	.
chr2	170741096	170741097	chr2:170741097:C:T	rs10188135	C	T	C	Sox2_MA0143.3	22	0	+	0	0	.
chr2	170743373	170743374	chr2:170743374:A:G	rs4668307	A	G	A	Sox2_MA0143.3	-9	0	+	0	0	.
chr2	170747669	170747670	chr2:170747670:C:G	rs12472397	C	G	C	Sox2_MA0143.3	13	0	+	0	0	.
chr2	170815536	170815537	chr2:170815537:A:G	rs45484595	A	G	A	Sox2_MA0143.3	23	0	+	0	0	.
chr2	170973496	170973497	chr2:170973497:A:C	rs148188964	A	C	A	Sox2_MA0143.3	-1	0	+	0	0	.
chr2	170973516	170973517	chr2:170973517:G:T	chr2:170973517:G:T	G	T	G	Sox2_MA0143.3	19	0	+	0	0	.
chr2	171043302	171043303	chr2:171043303:C:A	rs7584937	C	A	A	Sox2_MA0143.3	25	0	-	0	0	.
chr2	171086847	171086848	chr2:171086848:C:T	rs13010307	C	T	T	Sox2_MA0143.3	25	0	-	0	0	.
chr2	171086892	171086893	chr2:171086893:T:C	chr2:171086893:T:C	T	C	T	Sox2_MA0143.3	-20	0	-	0	0	.
chr2	171105861	171105862	chr2:171105862:C:T	rs55869271	C	T	C	Sox2_MA0143.3	7	1	-	8.864090315184848	3.5547341015215945	CCTTTGTG
chr2	171499506	171499507	chr2:171499507:G:T	chr2:171499507:G:T	G	T	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr2	171512889	171512890	chr2:171512890:T:C	rs10490603	T	C	T	Sox2_MA0143.3	-16	0	-	0	0	.
chr2	171521696	171521697	chr2:171521697:C:G	rs1558938	C	G	C	Sox2_MA0143.3	1	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr2	171562533	171562534	chr2:171562534:T:A	rs139229860	T	A	T	Sox2_MA0143.3	19	0	+	0	0	.
chr2	171596421	171596422	chr2:171596422:T:C	rs11689637	T	C	T	Sox2_MA0143.3	-6	0	-	0	0	.
chr2	171753152	171753153	chr2:171753153:A:G	rs546155592	A	G	A	Sox2_MA0143.3	-10	0	+	0	0	.
chr2	171838076	171838077	chr2:171838077:C:T	rs3821093	C	T	T	Sox2_MA0143.3	21	0	-	0	0	.
chr2	171858890	171858891	chr2:171858891:T:C	rs1105265	T	C	T	Sox2_MA0143.3	13	0	+	0	0	.
chr2	171923575	171923576	chr2:171923576:T:C	rs6758494	T	C	C	Sox2_MA0143.3	3	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr2	172000255	172000256	chr2:172000256:T:C	rs188242710	T	C	T	Sox2_MA0143.3	-14	0	+	0	0	.
chr2	172013646	172013647	chr2:172013647:C:G	rs6704590	C	G	C	Sox2_MA0143.3	5	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr2	172132608	172132609	chr2:172132609:C:T	rs11675761	C	T	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr2	172242552	172242553	chr2:172242553:G:A	rs72894808	G	A	A	Sox2_MA0143.3	-3	0	-	0	0	.
chr2	172251034	172251035	chr2:172251035:G:A	rs114833739	G	A	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr2	172262616	172262617	chr2:172262617:A:T	rs4294971	A	T	T	Sox2_MA0143.3	13	0	+	0	0	.
chr2	172329668	172329669	chr2:172329669:T:G	rs73018829	T	G	G	Sox2_MA0143.3	17	0	+	0	0	.
chr2	172333446	172333447	chr2:172333447:T:C	rs7425380	T	C	C	Sox2_MA0143.3	19	0	-	0	0	.
chr2	172435132	172435133	chr2:172435133:A:G	rs7567159	A	G	A	Sox2_MA0143.3	-6	0	+	0	0	.
chr2	172461517	172461518	chr2:172461518:C:T	rs13430568	C	T	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr2	172508461	172508462	chr2:172508462:A:G	rs1574257	A	G	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr2	172587427	172587428	chr2:172587428:T:C	rs11902810	T	C	C	Sox2_MA0143.3	4	1	+	8.864090315184848	1.9553355358696274	CCTTTGTG
chr2	172631469	172631470	chr2:172631470:T:C	rs148861912	T	C	T	Sox2_MA0143.3	25	0	+	0	0	.
chr2	172726125	172726126	chr2:172726126:A:C	rs6733278	A	C	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr2	172737076	172737077	chr2:172737077:A:G	rs7604177	A	G	A	Sox2_MA0143.3	-5	0	+	0	0	.
chr2	172991209	172991210	chr2:172991210:G:T	rs112515784	G	T	G	Sox2_MA0143.3	18	0	-	0	0	.
chr2	173218938	173218939	chr2:173218939:T:G	rs79338045	T	G	T	Sox2_MA0143.3	24	0	-	0	0	.
chr2	173245256	173245257	chr2:173245257:C:T	rs11901931	C	T	T	Sox2_MA0143.3	22	0	+	0	0	.
chr2	173286170	173286171	chr2:173286171:G:A	rs6705700	G	A	G	Sox2_MA0143.3	21	0	+	0	0	.
chr2	173546302	173546303	chr2:173546303:T:C	rs2358264	T	C	T	Sox2_MA0143.3	-3	0	-	0	0	.
chr2	173593380	173593381	chr2:173593381:C:A	rs60005612	C	A	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr2	174264179	174264180	chr2:174264180:A:T	rs1324766159	A	T	A	Sox2_MA0143.3	9	0	+	0	0	.
chr2	174275876	174275877	chr2:174275877:T:C	rs11675378	T	C	T	Sox2_MA0143.3	-3	0	+	0	0	.
chr2	174311018	174311019	chr2:174311019:G:A	rs13002825	G	A	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr2	174338042	174338043	chr2:174338043:C:G	rs193296279	C	G	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr2	174389555	174389556	chr2:174389556:G:C	rs10180988	G	C	c	Sox2_MA0143.3	0	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr2	174531690	174531691	chr2:174531691:T:A	rs13418471	T	A	t	Sox2_MA0143.3	11	0	-	0	0	.
chr2	174531696	174531697	chr2:174531697:C:T	rs75341755	C	T	c	Sox2_MA0143.3	5	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr2	174681912	174681913	chr2:174681913:C:G	rs149657377	C	G	G	Sox2_MA0143.3	12	0	+	0	0	.
chr2	174835898	174835899	chr2:174835899:G:A	rs535883248	G	A	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr2	174931783	174931784	chr2:174931784:T:C	rs147213435	T	C	T	Sox2_MA0143.3	-17	0	-	0	0	.
chr2	174972603	174972604	chr2:174972604:G:A	chr2:174972604:G:A	G	A	G	Sox2_MA0143.3	24	0	-	0	0	.
chr2	174972631	174972632	chr2:174972632:T:A	rs139103470	T	A	T	Sox2_MA0143.3	-4	0	-	0	0	.
chr2	174985702	174985703	chr2:174985703:C:T	rs114554232	C	T	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr2	175028604	175028605	chr2:175028605:T:C	rs1150186	T	C	c	Sox2_MA0143.3	-13	0	-	0	0	.
chr2	176001574	176001575	chr2:176001575:A:G	rs6707314	A	G	A	Sox2_MA0143.3	10	0	-	0	0	.
chr2	176097547	176097548	chr2:176097548:C:T	rs113800658	C	T	C	Sox2_MA0143.3	5	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr2	176114667	176114668	chr2:176114668:G:A	rs6709104	G	A	G	Sox2_MA0143.3	1	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr2	176151086	176151087	chr2:176151087:C:T	rs13418078	C	T	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr2	176151100	176151101	chr2:176151101:C:A	rs13418085	C	A	C	Sox2_MA0143.3	11	0	+	0	0	.
chr2	176177798	176177799	chr2:176177799:T:C	rs7600360	T	C	T	Sox2_MA0143.3	-8	0	+	0	0	.
chr2	176212317	176212318	chr2:176212318:C:T	rs16863623	C	T	C	Sox2_MA0143.3	1	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr2	176246690	176246691	chr2:176246691:A:G	rs1524082	A	G	G	Sox2_MA0143.3	27	0	+	0	0	.
chr2	176435694	176435695	chr2:176435695:C:A	rs115964604	C	A	G	Sox2_MA0143.3	10	0	+	0	0	.
chr2	176436035	176436036	chr2:176436036:G:C	rs7579439	G	C	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr2	176522362	176522363	chr2:176522363:G:A	rs36097946	G	A	G	Sox2_MA0143.3	26	0	-	0	0	.
chr2	176717600	176717601	chr2:176717601:G:A	rs2362869	G	A	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr2	176734672	176734673	chr2:176734673:A:G	rs61370766	A	G	G	Sox2_MA0143.3	6	1	-	8.676919043985553	1.7681642646703326	CCATTGTG
chr2	176751487	176751488	chr2:176751488:A:G	rs4893916	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr2	176814136	176814137	chr2:176814137:T:A	rs16864475	T	A	T	Sox2_MA0143.3	7	1	+	9.613475778572903	3.3675628303222993	CCATTGTT
chr2	176814139	176814140	chr2:176814140:A:G	rs17670224	A	G	A	Sox2_MA0143.3	10	0	+	0	0	.
chr2	176906395	176906396	chr2:176906396:C:T	rs1358296	C	T	T	Sox2_MA0143.3	-8	0	+	0	0	.
chr2	177000208	177000209	chr2:177000209:G:A	rs6433631	G	A	A	Sox2_MA0143.3	14	0	-	0	0	.
chr2	177038694	177038695	chr2:177038695:A:C	rs6729234	A	C	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr2	177052772	177052773	chr2:177052773:C:T	rs17631330	C	T	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr2	177292121	177292122	chr2:177292122:A:G	rs2706158	A	G	G	Sox2_MA0143.3	7	1	-	9.613475778572903	9.019595766176417	CCATTGTT
chr2	177634220	177634221	chr2:177634221:A:C	rs61570618	A	C	A	Sox2_MA0143.3	20	0	+	0	0	.
chr2	177670254	177670255	chr2:177670255:C:G	rs7605493	C	G	C	Sox2_MA0143.3	21	0	-	0	0	.
chr2	177676075	177676076	chr2:177676076:A:C	rs3770018	A	C	C	Sox2_MA0143.3	4	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr2	177680463	177680464	chr2:177680464:T:C	rs73042850	T	C	T	Sox2_MA0143.3	-13	0	+	0	0	.
chr2	177763821	177763822	chr2:177763822:G:C	rs111720489	G	C	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr2	177798008	177798009	chr2:177798009:C:G	rs77368725	C	G	C	Sox2_MA0143.3	17	0	+	0	0	.
chr2	177831282	177831283	chr2:177831283:A:T	rs3770051	A	T	A	Sox2_MA0143.3	-3	0	+	0	0	.
chr2	177906188	177906189	chr2:177906189:G:A	rs780246096	G	A	G	Sox2_MA0143.3	22	0	-	0	0	.
chr2	177906200	177906201	chr2:177906201:G:A	rs75857132	G	A	A	Sox2_MA0143.3	10	0	-	0	0	.
chr2	177906228	177906229	chr2:177906229:A:C	rs2695097	A	C	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr2	177917437	177917438	chr2:177917438:C:A	rs35305315	C	A	c	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr2	178143709	178143710	chr2:178143710:T:C	rs334071	T	C	T	Sox2_MA0143.3	-16	0	+	0	0	.
chr2	178188740	178188741	chr2:178188741:A:G	rs186736	A	G	G	Sox2_MA0143.3	12	0	-	0	0	.
chr2	178206395	178206396	chr2:178206396:G:A	rs76806666	G	A	G	Sox2_MA0143.3	8	0	-	0	0	.
chr2	178284766	178284767	chr2:178284767:T:C	rs77831770	T	C	T	Sox2_MA0143.3	9	0	-	0	0	.
chr2	178284794	178284795	chr2:178284795:T:C	rs7599683	T	C	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr2	178371320	178371321	chr2:178371321:T:C	rs1434094	T	C	C	Sox2_MA0143.3	10	0	+	0	0	.
chr2	178423106	178423107	chr2:178423107:T:C	rs2114582	T	C	A	Sox2_MA0143.3	8	0	+	0	0	.
chr2	178451488	178451489	chr2:178451489:G:A	rs114119504	G	A	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr2	178451528	178451529	chr2:178451529:G:A	rs116368316	G	A	G	Sox2_MA0143.3	21	0	+	0	0	.
chr2	178451727	178451728	chr2:178451728:C:T	rs886055210	C	T	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr2	178451746	178451747	chr2:178451747:T:A	rs74435413	T	A	T	Sox2_MA0143.3	17	0	+	0	0	.
chr2	178512552	178512553	chr2:178512553:G:A	rs8179648	G	A	G	Sox2_MA0143.3	20	0	-	0	0	.
chr2	178718589	178718590	chr2:178718590:G:A	rs72648978	G	A	G	Sox2_MA0143.3	1	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr2	178825505	178825506	chr2:178825506:C:T	rs6433735	C	T	T	Sox2_MA0143.3	8	0	-	0	0	.
chr2	178829410	178829411	chr2:178829411:A:G	chr2:178829411:A:G	A	G	A	Sox2_MA0143.3	-14	0	-	0	0	.
chr2	178854627	178854628	chr2:178854628:T:C	rs16866568	T	C	T	Sox2_MA0143.3	25	0	-	0	0	.
chr2	178859434	178859435	chr2:178859435:C:G	rs76615398	C	G	C	Sox2_MA0143.3	16	0	-	0	0	.
chr2	178883301	178883302	chr2:178883302:A:C	rs62177296	A	C	A	Sox2_MA0143.3	2	1	-	8.864090315184848	2.5582713367092715	CCTTTGTG
chr2	179008412	179008413	chr2:179008413:C:T	rs2886806	C	T	c	Sox2_MA0143.3	-20	0	+	0	0	.
chr2	179044730	179044731	chr2:179044731:C:G	rs340340	C	G	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr2	179044739	179044740	chr2:179044740:C:T	rs17362972	C	T	C	Sox2_MA0143.3	-12	0	-	0	0	.
chr2	179072819	179072820	chr2:179072820:A:C	rs6712648	A	C	A	Sox2_MA0143.3	6	1	-	8.676919043985553	1.7681642646703326	CCATTGTG
chr2	179184015	179184016	chr2:179184016:T:C	rs13022632	T	C	T	Sox2_MA0143.3	-14	0	-	0	0	.
chr2	179250337	179250338	chr2:179250338:T:C	rs6707081	T	C	C	Sox2_MA0143.3	11	0	-	0	0	.
chr2	179250348	179250349	chr2:179250349:G:T	rs75915527	G	T	G	Sox2_MA0143.3	0	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr2	179263851	179263852	chr2:179263852:C:T	rs10204985	C	T	C	Sox2_MA0143.3	9	0	+	0	0	.
chr2	179263992	179263993	chr2:179263993:C:T	rs554015078	C	T	C	Sox2_MA0143.3	14	0	-	0	0	.
chr2	179264001	179264002	chr2:179264002:C:G	chr2:179264002:C:G	C	G	C	Sox2_MA0143.3	5	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr2	179264006	179264007	chr2:179264007:G:A	rs77100570	G	A	G	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr2	179299640	179299641	chr2:179299641:C:G	rs1421873689	C	G	C	Sox2_MA0143.3	25	0	+	0	0	.
chr2	179308053	179308054	chr2:179308054:T:C	rs6735828	T	C	t	Sox2_MA0143.3	-10	0	+	0	0	.
chr2	179361448	179361449	chr2:179361449:A:G	rs34133036	A	G	A	Sox2_MA0143.3	14	0	+	0	0	.
chr2	179420439	179420440	chr2:179420440:A:T	rs72962302	A	T	A	Sox2_MA0143.3	6	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr2	179487606	179487607	chr2:179487607:G:A	rs17747468	G	A	G	Sox2_MA0143.3	19	0	-	0	0	.
chr2	179521475	179521476	chr2:179521476:C:A	rs10195725	C	A	A	Sox2_MA0143.3	-9	0	+	0	0	.
chr2	179521488	179521489	chr2:179521489:T:C	rs1829283	T	C	C	Sox2_MA0143.3	4	1	+	8.676919043985553	1.7681642646703322	CCATTGTG
chr2	179804806	179804807	chr2:179804807:C:T	rs7570985	C	T	T	Sox2_MA0143.3	-9	0	+	0	0	.
chr2	179983760	179983761	chr2:179983761:C:A	rs3845702	C	A	A	Sox2_MA0143.3	21	0	-	0	0	.
chr2	179983801	179983802	chr2:179983802:A:G	rs17174884	A	G	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr2	180057084	180057085	chr2:180057085:T:C	rs2678932	T	C	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr2	180057327	180057328	chr2:180057328:A:G	rs74614656	A	G	A	Sox2_MA0143.3	-20	0	-	0	0	.
chr2	180359904	180359905	chr2:180359905:G:A	rs112629755	G	A	G	Sox2_MA0143.3	25	0	+	0	0	.
chr2	180370698	180370699	chr2:180370699:T:G	rs6759225	T	G	T	Sox2_MA0143.3	13	0	-	0	0	.
chr2	180370700	180370701	chr2:180370701:C:T	chr2:180370701:C:T	C	T	C	Sox2_MA0143.3	11	0	-	0	0	.
chr2	180482575	180482576	chr2:180482576:A:G	rs7571602	A	G	G	Sox2_MA0143.3	4	1	-	8.864090315184848	1.9553355358696274	CCTTTGTG
chr2	180559799	180559800	chr2:180559800:A:C	rs11889207	A	C	A	Sox2_MA0143.3	21	0	-	0	0	.
chr2	180607475	180607476	chr2:180607476:C:T	rs17364345	C	T	C	Sox2_MA0143.3	14	0	+	0	0	.
chr2	180743670	180743671	chr2:180743671:A:C	rs16823637	A	C	A	Sox2_MA0143.3	7	1	+	3.5547341015215945	9.206767037375712	CCTTTGTA
chr2	180743687	180743688	chr2:180743688:T:C	rs77000181	T	C	T	Sox2_MA0143.3	24	0	+	0	0	.
chr2	180762022	180762023	chr2:180762023:C:T	rs6433860	C	T	C	Sox2_MA0143.3	7	1	+	9.019595766176417	9.613475778572903	CCATTGTC
chr2	180777154	180777155	chr2:180777155:A:G	rs35432699	A	G	a	Sox2_MA0143.3	14	0	-	0	0	.
chr2	180927563	180927564	chr2:180927564:G:T	rs67952832	G	T	G	Sox2_MA0143.3	9	0	-	0	0	.
chr2	180979453	180979454	chr2:180979454:T:C	rs10168243	T	C	T	Sox2_MA0143.3	-19	0	+	0	0	.
chr2	181104823	181104824	chr2:181104824:A:T	chr2:181104824:A:T	A	T	A	Sox2_MA0143.3	-3	0	+	0	0	.
chr2	181197339	181197340	chr2:181197340:C:T	rs4233791	C	T	c	Sox2_MA0143.3	27	0	-	0	0	.
chr2	181371219	181371220	chr2:181371220:A:C	rs16867421	A	C	A	Sox2_MA0143.3	4	1	-	9.800647049772198	2.8918922704569785	CCTTTGTT
chr2	181426905	181426906	chr2:181426906:G:C	rs143947584	G	C	G	Sox2_MA0143.3	23	0	+	0	0	.
chr2	181680830	181680831	chr2:181680831:G:C	rs113270379	G	C	g	Sox2_MA0143.3	-19	0	+	0	0	.
chr2	181805935	181805936	chr2:181805936:G:C	rs10183937	G	C	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr2	181861411	181861412	chr2:181861412:C:T	chr2:181861412:C:T	C	T	C	Sox2_MA0143.3	5	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr2	181924616	181924617	chr2:181924617:C:G	rs80021230	C	G	C	Sox2_MA0143.3	13	0	-	0	0	.
chr2	181924641	181924642	chr2:181924642:C:A	rs77270380	C	A	C	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr2	181953927	181953928	chr2:181953928:A:T	rs76573126	A	T	A	Sox2_MA0143.3	26	0	-	0	0	.
chr2	181991720	181991721	chr2:181991721:C:T	rs187040468	C	T	C	Sox2_MA0143.3	19	0	+	0	0	.
chr2	182096721	182096722	chr2:182096722:G:C	rs1400004	G	C	G	Sox2_MA0143.3	23	0	+	0	0	.
chr2	182186721	182186722	chr2:182186722:T:C	rs10930991	T	C	T	Sox2_MA0143.3	-3	0	+	0	0	.
chr2	182207701	182207702	chr2:182207702:G:A	rs12477696	G	A	A	Sox2_MA0143.3	-5	0	-	0	0	.
chr2	182244986	182244987	chr2:182244987:G:T	rs1864851	G	T	T	Sox2_MA0143.3	-10	0	-	0	0	.
chr2	182317724	182317725	chr2:182317725:G:A	rs73038191	G	A	G	Sox2_MA0143.3	8	0	-	0	0	.
chr2	182381456	182381457	chr2:182381457:G:C	rs75753961	G	C	G	Sox2_MA0143.3	-3	0	+	0	0	.
chr2	182477997	182477998	chr2:182477998:G:A	rs10206152	G	A	A	Sox2_MA0143.3	9	0	-	0	0	.
chr2	182528663	182528664	chr2:182528664:C:T	rs557083611	C	T	C	Sox2_MA0143.3	22	0	+	0	0	.
chr2	182667389	182667390	chr2:182667390:T:C	rs115808389	T	C	T	Sox2_MA0143.3	26	0	-	0	0	.
chr2	182784972	182784973	chr2:182784973:C:T	rs288311	C	T	T	Sox2_MA0143.3	-4	0	+	0	0	.
chr2	182920851	182920852	chr2:182920852:C:T	rs4334455	C	T	T	Sox2_MA0143.3	-11	0	-	0	0	.
chr2	183222919	183222920	chr2:183222920:T:C	rs6717880	T	C	T	Sox2_MA0143.3	-3	0	+	0	0	.
chr2	183261256	183261257	chr2:183261257:A:G	rs1979359	A	G	G	Sox2_MA0143.3	19	0	-	0	0	.
chr2	183475396	183475397	chr2:183475397:T:C	rs549301757	T	C	T	Sox2_MA0143.3	-8	0	-	0	0	.
chr2	183487001	183487002	chr2:183487002:C:T	rs73977904	C	T	C	Sox2_MA0143.3	27	0	+	0	0	.
chr2	183579641	183579642	chr2:183579642:T:C	rs1950038	T	C	T	Sox2_MA0143.3	19	0	-	0	0	.
chr2	184342470	184342471	chr2:184342471:G:A	rs1455888	G	A	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr2	184534185	184534186	chr2:184534186:A:G	rs77785660	A	G	A	Sox2_MA0143.3	4	1	-	8.676919043985553	1.7681642646703322	CCATTGTG
chr2	184546072	184546073	chr2:184546073:A:G	rs6434087	A	G	A	Sox2_MA0143.3	21	0	+	0	0	.
chr2	184905186	184905187	chr2:184905187:T:C	rs151243306	T	C	T	Sox2_MA0143.3	2	1	+	9.206767037375712	2.900948058900136	CCTTTGTC
chr2	185313873	185313874	chr2:185313874:G:A	rs1075143	G	A	A	Sox2_MA0143.3	-4	0	-	0	0	.
chr2	185568066	185568067	chr2:185568067:A:G	rs771004606	A	G	A	Sox2_MA0143.3	6	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr2	185668768	185668769	chr2:185668769:T:C	rs1116941	T	C	T	Sox2_MA0143.3	-9	0	+	0	0	.
chr2	186188438	186188439	chr2:186188439:C:A	rs72905615	C	A	C	Sox2_MA0143.3	0	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr2	186194692	186194693	chr2:186194693:A:T	rs6726048	A	T	T	Sox2_MA0143.3	25	0	-	0	0	.
chr2	186439717	186439718	chr2:186439718:C:A	rs6712627	C	A	C	Sox2_MA0143.3	13	0	-	0	0	.
chr2	186570037	186570038	chr2:186570038:T:C	rs72903109	T	C	T	Sox2_MA0143.3	2	1	-	8.676919043985553	2.5582713367092715	CCATTGTG
chr2	186570038	186570039	chr2:186570039:G:C	rs72903112	G	C	G	Sox2_MA0143.3	1	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr2	186590839	186590840	chr2:186590840:C:T	rs141907735	C	T	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr2	186975267	186975268	chr2:186975268:T:C	rs13007449	T	C	T	Sox2_MA0143.3	-13	0	-	0	0	.
chr2	186981616	186981617	chr2:186981617:C:G	rs10460380	C	G	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr2	187075282	187075283	chr2:187075283:A:G	rs75796941	A	G	A	Sox2_MA0143.3	25	0	-	0	0	.
chr2	187075293	187075294	chr2:187075294:T:C	rs80201670	T	C	T	Sox2_MA0143.3	14	0	-	0	0	.
chr2	187117720	187117721	chr2:187117721:C:T	rs116337875	C	T	A	Sox2_MA0143.3	19	0	+	0	0	.
chr2	187169340	187169341	chr2:187169341:G:A	rs72899263	G	A	G	Sox2_MA0143.3	10	0	-	0	0	.
chr2	187424316	187424317	chr2:187424317:G:A	rs73981576	G	A	G	Sox2_MA0143.3	5	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr2	187424328	187424329	chr2:187424329:C:A	rs75561293	C	A	C	Sox2_MA0143.3	17	0	+	0	0	.
chr2	187556371	187556372	chr2:187556372:T:C	rs145763517	T	C	-	Sox2_MA0143.3	13	0	+	0	0	.
chr2	187923284	187923285	chr2:187923285:A:G	rs185030598	A	G	A	Sox2_MA0143.3	-20	0	+	0	0	.
chr2	187994874	187994875	chr2:187994875:G:A	rs75163956	G	A	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr2	188106172	188106173	chr2:188106173:C:A	rs1583765	C	A	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr2	188316523	188316524	chr2:188316524:G:A	rs12619948	G	A	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr2	188326852	188326853	chr2:188326853:G:T	rs890143681	G	T	G	Sox2_MA0143.3	5	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr2	188415877	188415878	chr2:188415878:C:G	rs4381754	C	G	C	Sox2_MA0143.3	0	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr2	188415902	188415903	chr2:188415903:A:G	rs4476318	A	G	A	Sox2_MA0143.3	25	0	+	0	0	.
chr2	188577398	188577399	chr2:188577399:A:G	rs78943328	A	G	A	Sox2_MA0143.3	26	0	-	0	0	.
chr2	188938097	188938098	chr2:188938098:C:T	rs6434303	C	T	T	Sox2_MA0143.3	-3	0	-	0	0	.
chr2	188969235	188969236	chr2:188969236:T:C	rs6434305	T	C	T	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr2	189016178	189016179	chr2:189016179:G:A	rs62181745	G	A	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr2	189110348	189110349	chr2:189110349:A:G	rs76511879	A	G	A	Sox2_MA0143.3	2	1	+	9.019595766176417	2.900948058900136	CCATTGTC
chr2	189147449	189147450	chr2:189147450:C:G	rs2351627	C	G	C	Sox2_MA0143.3	5	1	-	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr2	189284881	189284882	chr2:189284882:T:C	rs79003073	T	C	T	Sox2_MA0143.3	20	0	+	0	0	.
chr2	189304490	189304491	chr2:189304491:G:C	rs116019473	G	C	G	Sox2_MA0143.3	20	0	-	0	0	.
chr2	189350954	189350955	chr2:189350955:A:G	rs78861577	A	G	A	Sox2_MA0143.3	-11	0	-	0	0	.
chr2	189370084	189370085	chr2:189370085:A:T	rs72914141	A	T	A	Sox2_MA0143.3	-1	0	-	0	0	.
chr2	189552978	189552979	chr2:189552979:T:C	rs73047709	T	C	T	Sox2_MA0143.3	3	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr2	189934212	189934213	chr2:189934213:T:C	rs6761221	T	C	T	Sox2_MA0143.3	-16	0	+	0	0	.
chr2	189943597	189943598	chr2:189943598:G:T	rs11883483	G	T	G	Sox2_MA0143.3	5	1	+	9.019595766176417	2.110840986861197	CCATTGTC
chr2	190064876	190064877	chr2:190064877:C:T	rs139220828	C	T	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr2	190089132	190089133	chr2:190089133:C:T	chr2:190089133:C:T	C	T	C	Sox2_MA0143.3	18	0	+	0	0	.
chr2	190137540	190137541	chr2:190137541:C:A	rs4531957	C	A	C	Sox2_MA0143.3	-5	0	-	0	0	.
chr2	190408814	190408815	chr2:190408815:C:T	rs371325367	C	T	t	Sox2_MA0143.3	20	0	-	0	0	.
chr2	190465297	190465298	chr2:190465298:T:C	rs10209340	T	C	T	Sox2_MA0143.3	-8	0	+	0	0	.
chr2	190578828	190578829	chr2:190578829:A:G	rs189841833	A	G	A	Sox2_MA0143.3	11	0	-	0	0	.
chr2	190665183	190665184	chr2:190665184:G:A	rs10194854	G	A	G	Sox2_MA0143.3	22	0	+	0	0	.
chr2	190669135	190669136	chr2:190669136:C:T	rs11895262	C	T	C	Sox2_MA0143.3	5	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr2	190683138	190683139	chr2:190683139:C:G	rs57780226	C	G	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr2	190834319	190834320	chr2:190834320:T:C	rs16832990	T	C	T	Sox2_MA0143.3	17	0	+	0	0	.
chr2	190837569	190837570	chr2:190837570:G:A	rs184977404	G	A	G	Sox2_MA0143.3	22	0	+	0	0	.
chr2	190845342	190845343	chr2:190845343:A:G	rs6756669	A	G	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr2	190890065	190890066	chr2:190890066:T:C	rs11894259	T	C	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr2	191014651	191014652	chr2:191014652:A:T	rs45447499	A	T	A	Sox2_MA0143.3	12	0	+	0	0	.
chr2	191028360	191028361	chr2:191028361:A:C	rs3024912	A	C	A	Sox2_MA0143.3	4	1	-	8.864090315184848	1.9553355358696274	CCTTTGTG
chr2	191050946	191050947	chr2:191050947:T:A	rs1400654	T	A	T	Sox2_MA0143.3	-7	0	+	0	0	.
chr2	191105152	191105153	chr2:191105153:G:C	rs10181656	G	C	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr2	191165664	191165665	chr2:191165665:C:T	rs1869624	C	T	T	Sox2_MA0143.3	-14	0	+	0	0	.
chr2	191165971	191165972	chr2:191165972:A:C	rs1011755479	A	C	A	Sox2_MA0143.3	-13	0	-	0	0	.
chr2	191166491	191166492	chr2:191166492:T:G	rs143988145	T	G	T	Sox2_MA0143.3	-14	0	-	0	0	.
chr2	191219577	191219578	chr2:191219578:A:T	rs111384558	A	T	A	Sox2_MA0143.3	17	0	-	0	0	.
chr2	191245728	191245729	chr2:191245729:C:T	chr2:191245729:C:T	C	T	C	Sox2_MA0143.3	23	0	+	0	0	.
chr2	191246170	191246171	chr2:191246171:C:A	rs369382384	C	A	C	Sox2_MA0143.3	8	0	+	0	0	.
chr2	191246187	191246188	chr2:191246188:G:A	chr2:191246188:G:A	G	A	G	Sox2_MA0143.3	25	0	+	0	0	.
chr2	191302020	191302021	chr2:191302021:T:C	rs1973067	T	C	T	Sox2_MA0143.3	-1	0	+	0	0	.
chr2	191401462	191401463	chr2:191401463:C:A	chr2:191401463:C:A	C	A	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr2	191436857	191436858	chr2:191436858:C:T	rs2138915	C	T	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr2	191436888	191436889	chr2:191436889:T:G	chr2:191436889:T:G	T	G	T	Sox2_MA0143.3	12	0	+	0	0	.
chr2	191436892	191436893	chr2:191436893:C:T	rs573548933	C	T	C	Sox2_MA0143.3	16	0	+	0	0	.
chr2	191501822	191501823	chr2:191501823:C:T	rs9288183	C	T	T	Sox2_MA0143.3	-16	0	+	0	0	.
chr2	191522572	191522573	chr2:191522573:T:C	rs13433014	T	C	T	Sox2_MA0143.3	3	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr2	191565596	191565597	chr2:191565597:C:G	rs79264109	C	G	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr2	191570537	191570538	chr2:191570538:G:A	rs4640333	G	A	A	Sox2_MA0143.3	9	0	+	0	0	.
chr2	191701893	191701894	chr2:191701894:A:G	rs912696105	A	G	A	Sox2_MA0143.3	-13	0	+	0	0	.
chr2	191703300	191703301	chr2:191703301:G:A	rs113162162	G	A	G	Sox2_MA0143.3	9	0	+	0	0	.
chr2	191861351	191861352	chr2:191861352:T:A	rs62179957	T	A	T	Sox2_MA0143.3	23	0	-	0	0	.
chr2	191901216	191901217	chr2:191901217:G:A	rs114532534	G	A	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr2	192124464	192124465	chr2:192124465:G:T	rs1806647	G	T	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr2	192124468	192124469	chr2:192124469:T:C	rs72918164	T	C	T	Sox2_MA0143.3	-12	0	-	0	0	.
chr2	192291744	192291745	chr2:192291745:C:T	rs1596877	C	T	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr2	192585611	192585612	chr2:192585612:A:G	rs185756308	A	G	A	Sox2_MA0143.3	2	1	-	3.5547341015215945	-2.751084876953981	CCTTTGTA
chr2	192775925	192775926	chr2:192775926:G:A	rs1439650	G	A	A	Sox2_MA0143.3	26	0	-	0	0	.
chr2	195114886	195114887	chr2:195114887:T:C	rs62196781	T	C	T	Sox2_MA0143.3	-1	0	-	0	0	.
chr2	195319100	195319101	chr2:195319101:A:T	rs4341957	A	T	T	Sox2_MA0143.3	20	0	-	0	0	.
chr2	195319107	195319108	chr2:195319108:T:C	rs55766017	T	C	T	Sox2_MA0143.3	13	0	-	0	0	.
chr2	195395565	195395566	chr2:195395566:C:T	rs16840070	C	T	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr2	195468633	195468634	chr2:195468634:G:A	rs4850619	G	A	G	Sox2_MA0143.3	5	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr2	195565735	195565736	chr2:195565736:C:T	rs72927801	C	T	C	Sox2_MA0143.3	23	0	+	0	0	.
chr2	195967687	195967688	chr2:195967688:G:A	rs114674438	G	A	G	Sox2_MA0143.3	20	0	+	0	0	.
chr2	196131564	196131565	chr2:196131565:T:C	rs534177800	T	C	T	Sox2_MA0143.3	26	0	-	0	0	.
chr2	196155733	196155734	chr2:196155734:A:G	rs16845888	A	G	A	Sox2_MA0143.3	14	0	-	0	0	.
chr2	196160258	196160259	chr2:196160259:G:C	rs75885050	G	C	G	Sox2_MA0143.3	15	0	-	0	0	.
chr2	196165861	196165862	chr2:196165862:T:A	rs16846171	T	A	T	Sox2_MA0143.3	-12	0	+	0	0	.
chr2	196182368	196182369	chr2:196182369:T:C	rs1869791	T	C	C	Sox2_MA0143.3	3	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr2	196184442	196184443	chr2:196184443:A:G	rs11682419	A	G	g	Sox2_MA0143.3	-4	0	-	0	0	.
chr2	196319596	196319597	chr2:196319597:C:T	rs1531111	C	T	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr2	196912864	196912865	chr2:196912865:C:T	rs12693800	C	T	T	Sox2_MA0143.3	-14	0	-	0	0	.
chr2	196927735	196927736	chr2:196927736:A:T	rs569333413	A	T	a	Sox2_MA0143.3	-11	0	-	0	0	.
chr2	196988069	196988070	chr2:196988070:A:C	rs75088057	A	C	A	Sox2_MA0143.3	25	0	+	0	0	.
chr2	197128232	197128233	chr2:197128233:T:A	rs112898008	T	A	T	Sox2_MA0143.3	2	1	-	8.676919043985553	8.864090315184848	CCATTGTG
chr2	197141949	197141950	chr2:197141950:A:C	chr2:197141950:A:C	A	C	A	Sox2_MA0143.3	-16	0	+	0	0	.
chr2	197239092	197239093	chr2:197239093:C:T	rs7604929	C	T	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr2	197255771	197255772	chr2:197255772:C:T	rs776005068	C	T	C	Sox2_MA0143.3	25	0	-	0	0	.
chr2	197296470	197296471	chr2:197296471:A:G	rs2195510	A	G	G	Sox2_MA0143.3	3	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr2	197311843	197311844	chr2:197311844:C:T	rs149828981	C	T	C	Sox2_MA0143.3	12	0	-	0	0	.
chr2	197364272	197364273	chr2:197364273:G:A	rs788014	G	A	A	Sox2_MA0143.3	27	0	+	0	0	.
chr2	197521450	197521451	chr2:197521451:C:T	rs9973444	C	T	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr2	197670953	197670954	chr2:197670954:T:C	rs4286272	T	C	C	Sox2_MA0143.3	4	1	+	3.5547341015215945	-3.3540206777936254	CCTTTGTA
chr2	197670954	197670955	chr2:197670955:G:A	rs75415672	G	A	A	Sox2_MA0143.3	5	1	+	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr2	197869705	197869706	chr2:197869706:A:G	rs144476143	A	G	A	Sox2_MA0143.3	-5	0	-	0	0	.
chr2	197978934	197978935	chr2:197978935:C:T	rs61184128	C	T	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr2	198053799	198053800	chr2:198053800:C:A	rs57603546	C	A	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr2	198055863	198055864	chr2:198055864:C:T	rs575210700	C	T	C	Sox2_MA0143.3	19	0	-	0	0	.
chr2	198080766	198080767	chr2:198080767:T:A	rs16827456	T	A	T	Sox2_MA0143.3	-11	0	+	0	0	.
chr2	198143998	198143999	chr2:198143999:C:T	rs16827918	C	T	T	Sox2_MA0143.3	-11	0	+	0	0	.
chr2	198162465	198162466	chr2:198162466:T:C	rs62277919	T	C	T	Sox2_MA0143.3	14	0	-	0	0	.
chr2	198337580	198337581	chr2:198337581:G:C	rs17382200	G	C	G	Sox2_MA0143.3	12	0	+	0	0	.
chr2	198385428	198385429	chr2:198385429:C:A	rs55813626	C	A	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr2	198693000	198693001	chr2:198693001:C:T	rs17826222	C	T	C	Sox2_MA0143.3	26	0	+	0	0	.
chr2	198873775	198873776	chr2:198873776:A:G	rs77695424	A	G	A	Sox2_MA0143.3	17	0	-	0	0	.
chr2	198968221	198968222	chr2:198968222:A:G	rs75784545	A	G	A	Sox2_MA0143.3	-8	0	+	0	0	.
chr2	199125383	199125384	chr2:199125384:A:G	rs1451488	A	G	A	Sox2_MA0143.3	6	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr2	199329547	199329548	chr2:199329548:C:T	rs2121378	C	T	T	Sox2_MA0143.3	-15	0	-	0	0	.
chr2	199424428	199424429	chr2:199424429:A:G	rs13400686	A	G	A	Sox2_MA0143.3	-10	0	-	0	0	.
chr2	199581978	199581979	chr2:199581979:A:C	rs1049374448	A	C	A	Sox2_MA0143.3	12	0	+	0	0	.
chr2	199707782	199707783	chr2:199707783:C:T	rs1038500007	C	T	C	Sox2_MA0143.3	18	0	+	0	0	.
chr2	199716605	199716606	chr2:199716606:A:G	rs13009877	A	G	A	Sox2_MA0143.3	4	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr2	199717877	199717878	chr2:199717878:A:G	rs1357584	A	G	G	Sox2_MA0143.3	21	0	-	0	0	.
chr2	199778770	199778771	chr2:199778771:T:C	rs7578914	T	C	T	Sox2_MA0143.3	2	1	+	8.864090315184848	2.5582713367092715	CCTTTGTG
chr2	199799146	199799147	chr2:199799147:A:G	rs77624902	A	G	A	Sox2_MA0143.3	11	0	-	0	0	.
chr2	199922995	199922996	chr2:199922996:T:C	rs281759	T	C	T	Sox2_MA0143.3	22	0	+	0	0	.
chr2	199929060	199929061	chr2:199929061:T:C	rs16832051	T	C	T	Sox2_MA0143.3	17	0	-	0	0	.
chr2	200050165	200050166	chr2:200050166:C:T	rs144358675	C	T	C	Sox2_MA0143.3	23	0	-	0	0	.
chr2	200126197	200126198	chr2:200126198:A:C	rs138091192	A	C	A	Sox2_MA0143.3	12	0	+	0	0	.
chr2	200219798	200219799	chr2:200219799:G:T	rs56328455	G	T	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr2	200480151	200480152	chr2:200480152:G:A	rs115008954	G	A	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr2	200496964	200496965	chr2:200496965:G:T	rs12693915	G	T	g	Sox2_MA0143.3	-10	0	+	0	0	.
chr2	200585010	200585011	chr2:200585011:C:G	rs2072034	C	G	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr2	200648671	200648672	chr2:200648672:T:C	rs113366024	T	C	T	Sox2_MA0143.3	8	0	+	0	0	.
chr2	200667901	200667902	chr2:200667902:A:T	rs2715905	A	T	T	Sox2_MA0143.3	-10	0	-	0	0	.
chr2	200688714	200688715	chr2:200688715:T:G	rs4674325	T	G	T	Sox2_MA0143.3	6	1	+	8.676919043985553	1.7681642646703326	CCATTGTG
chr2	200694253	200694254	chr2:200694254:C:G	rs869134	C	G	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr2	200751666	200751667	chr2:200751667:C:A	rs2348125	C	A	A	Sox2_MA0143.3	-20	0	+	0	0	.
chr2	200762358	200762359	chr2:200762359:G:T	rs73991105	G	T	G	Sox2_MA0143.3	13	0	-	0	0	.
chr2	200766669	200766670	chr2:200766670:G:A	rs16834415	G	A	g	Sox2_MA0143.3	10	0	+	0	0	.
chr2	201124167	201124168	chr2:201124168:G:T	rs115210821	G	T	G	Sox2_MA0143.3	-12	0	+	0	0	.
chr2	201130915	201130916	chr2:201130916:T:G	rs79959919	T	G	T	Sox2_MA0143.3	4	1	+	3.5547341015215945	-3.3540206777936254	CCTTTGTA
chr2	201130922	201130923	chr2:201130923:A:G	rs186042810	A	G	A	Sox2_MA0143.3	11	0	+	0	0	.
chr2	201239246	201239247	chr2:201239247:A:C	rs7575657	A	C	-	Sox2_MA0143.3	2	1	+	9.019595766176417	2.900948058900136	CCATTGTC
chr2	201254548	201254549	chr2:201254549:A:C	rs3754935	A	C	A	Sox2_MA0143.3	27	0	-	0	0	.
chr2	201261984	201261985	chr2:201261985:A:G	rs7568770	A	G	G	Sox2_MA0143.3	15	0	+	0	0	.
chr2	201357197	201357198	chr2:201357198:C:T	rs2110684	C	T	C	Sox2_MA0143.3	17	0	-	0	0	.
chr2	201407308	201407309	chr2:201407309:T:A	rs11691865	T	A	T	Sox2_MA0143.3	2	1	-	9.613475778572903	9.800647049772198	CCATTGTT
chr2	201520469	201520470	chr2:201520470:T:A	rs76625755	T	A	T	Sox2_MA0143.3	15	0	-	0	0	.
chr2	201656355	201656356	chr2:201656356:C:T	rs763070629	C	T	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr2	201890452	201890453	chr2:201890453:A:G	rs12052900	A	G	A	Sox2_MA0143.3	-8	0	+	0	0	.
chr2	201977393	201977394	chr2:201977394:G:A	rs13026642	G	A	A	Sox2_MA0143.3	19	0	-	0	0	.
chr2	201984931	201984932	chr2:201984932:G:A	rs759422	G	A	G	Sox2_MA0143.3	-5	0	+	0	0	.
chr2	202007488	202007489	chr2:202007489:A:G	rs6734893	A	G	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr2	202091096	202091097	chr2:202091097:G:A	rs1568534	G	A	G	Sox2_MA0143.3	-2	0	+	0	0	.
chr2	202099656	202099657	chr2:202099657:G:A	rs2882486	G	A	A	Sox2_MA0143.3	24	0	+	0	0	.
chr2	202144648	202144649	chr2:202144649:T:C	rs2049192	T	C	T	Sox2_MA0143.3	4	1	+	3.5547341015215945	-3.3540206777936254	CCTTTGTA
chr2	202222005	202222006	chr2:202222006:G:C	rs4675272	G	C	G	Sox2_MA0143.3	1	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr2	202273165	202273166	chr2:202273166:A:T	rs77018809	A	T	t	Sox2_MA0143.3	24	0	-	0	0	.
chr2	202408835	202408836	chr2:202408836:A:G	rs7583801	A	G	a	Sox2_MA0143.3	-3	0	-	0	0	.
chr2	202408837	202408838	chr2:202408838:A:G	rs12469580	A	G	A	Sox2_MA0143.3	-5	0	-	0	0	.
chr2	202663255	202663256	chr2:202663256:T:C	rs7569317	T	C	T	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr2	202680220	202680221	chr2:202680221:C:T	rs13430645	C	T	C	Sox2_MA0143.3	27	0	+	0	0	.
chr2	202823582	202823583	chr2:202823583:C:T	rs62194668	C	T	.	Sox2_MA0143.3	1	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr2	202848556	202848557	chr2:202848557:C:A	rs72934715	C	A	c	Sox2_MA0143.3	-18	0	-	0	0	.
chr2	203175482	203175483	chr2:203175483:G:A	rs7600392	G	A	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr2	203191290	203191291	chr2:203191291:T:C	rs775880894	T	C	-	Sox2_MA0143.3	-5	0	-	0	0	.
chr2	203328077	203328078	chr2:203328078:A:G	rs923364734	A	G	A	Sox2_MA0143.3	3	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr2	203328086	203328087	chr2:203328087:G:A	chr2:203328087:G:A	G	A	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr2	203535858	203535859	chr2:203535859:C:T	rs78614776	C	T	c	Sox2_MA0143.3	-15	0	+	0	0	.
chr2	203603876	203603877	chr2:203603877:G:A	rs4485546	G	A	A	Sox2_MA0143.3	13	0	-	0	0	.
chr2	203708668	203708669	chr2:203708669:C:G	rs35988305	C	G	G	Sox2_MA0143.3	19	0	+	0	0	.
chr2	203759050	203759051	chr2:203759051:A:T	rs532333226	A	T	A	Sox2_MA0143.3	-8	0	+	0	0	.
chr2	203779786	203779787	chr2:203779787:C:T	rs114064378	C	T	T	Sox2_MA0143.3	-11	0	-	0	0	.
chr2	203880439	203880440	chr2:203880440:T:C	rs11571298	T	C	C	Sox2_MA0143.3	23	0	-	0	0	.
chr2	203946899	203946900	chr2:203946900:G:C	rs4522587	G	C	G	Sox2_MA0143.3	22	0	+	0	0	.
chr2	204073672	204073673	chr2:204073673:C:T	rs1559933	C	T	C	Sox2_MA0143.3	-12	0	-	0	0	.
chr2	204162924	204162925	chr2:204162925:A:T	rs4675426	A	T	T	Sox2_MA0143.3	-3	0	-	0	0	.
chr2	204301204	204301205	chr2:204301205:T:G	rs6743776	T	G	T	Sox2_MA0143.3	-4	0	+	0	0	.
chr2	204515099	204515100	chr2:204515100:A:G	rs12104992	A	G	A	Sox2_MA0143.3	16	0	-	0	0	.
chr2	204594640	204594641	chr2:204594641:C:T	rs189615478	C	T	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr2	204758288	204758289	chr2:204758289:C:T	rs80143942	C	T	C	Sox2_MA0143.3	25	0	-	0	0	.
chr2	204758332	204758333	chr2:204758333:G:A	rs1011817	G	A	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr2	204794380	204794381	chr2:204794381:C:T	rs6715642	C	T	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr2	204957664	204957665	chr2:204957665:C:T	rs76380141	C	T	.	Sox2_MA0143.3	-12	0	+	0	0	.
chr2	204984910	204984911	chr2:204984911:C:A	rs77803211	C	A	C	Sox2_MA0143.3	19	0	+	0	0	.
chr2	205198573	205198574	chr2:205198574:G:A	rs11681930	G	A	G	Sox2_MA0143.3	18	0	-	0	0	.
chr2	205273349	205273350	chr2:205273350:G:A	rs10197562	G	A	A	Sox2_MA0143.3	-3	0	+	0	0	.
chr2	205453296	205453297	chr2:205453297:G:C	rs149280878	G	C	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr2	205615628	205615629	chr2:205615629:C:A	rs80119103	C	A	C	Sox2_MA0143.3	24	0	-	0	0	.
chr2	205615668	205615669	chr2:205615669:C:T	rs17682782	C	T	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr2	205699078	205699079	chr2:205699079:C:T	rs1020467722	C	T	C	Sox2_MA0143.3	25	0	+	0	0	.
chr2	205707903	205707904	chr2:205707904:A:G	rs849550	A	G	A	Sox2_MA0143.3	27	0	-	0	0	.
chr2	205721742	205721743	chr2:205721743:C:A	rs849540	C	A	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr2	205771286	205771287	chr2:205771287:G:A	rs140966728	G	A	G	Sox2_MA0143.3	15	0	+	0	0	.
chr2	205801322	205801323	chr2:205801323:C:T	rs76121689	C	T	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr2	205869541	205869542	chr2:205869542:A:G	rs71427802	A	G	A	Sox2_MA0143.3	-9	0	+	0	0	.
chr2	205964281	205964282	chr2:205964282:A:G	rs1861720	A	G	G	Sox2_MA0143.3	6	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr2	205969193	205969194	chr2:205969194:G:A	rs4675577	G	A	g	Sox2_MA0143.3	-17	0	+	0	0	.
chr2	205975243	205975244	chr2:205975244:C:T	rs13390276	C	T	T	Sox2_MA0143.3	-18	0	-	0	0	.
chr2	206122638	206122639	chr2:206122639:A:G	rs76005083	A	G	A	Sox2_MA0143.3	12	0	-	0	0	.
chr2	206193628	206193629	chr2:206193629:T:C	rs72944886	T	C	T	Sox2_MA0143.3	22	0	-	0	0	.
chr2	206202454	206202455	chr2:206202455:G:A	rs17223039	G	A	G	Sox2_MA0143.3	-12	0	+	0	0	.
chr2	206217979	206217980	chr2:206217980:T:C	rs76854079	T	C	T	Sox2_MA0143.3	-5	0	-	0	0	.
chr2	206219336	206219337	chr2:206219337:C:T	rs76429321	C	T	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr2	206273754	206273755	chr2:206273755:A:G	rs6758398	A	G	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr2	206364023	206364024	chr2:206364024:G:C	chr2:206364024:G:C	G	C	G	Sox2_MA0143.3	-14	0	+	0	0	.
chr2	206408537	206408538	chr2:206408538:T:A	rs62195933	T	A	t	Sox2_MA0143.3	11	0	-	0	0	.
chr2	206648058	206648059	chr2:206648059:G:A	rs6722977	G	A	A	Sox2_MA0143.3	-18	0	-	0	0	.
chr2	206800661	206800662	chr2:206800662:G:T	rs78449302	G	T	.	Sox2_MA0143.3	27	0	-	0	0	.
chr2	206800691	206800692	chr2:206800692:C:A	rs370447673	C	A	.	Sox2_MA0143.3	-3	0	-	0	0	.
chr2	206948847	206948848	chr2:206948848:A:C	rs993022	A	C	A	Sox2_MA0143.3	23	0	-	0	0	.
chr2	207090752	207090753	chr2:207090753:G:A	rs1271272	G	A	G	Sox2_MA0143.3	26	0	-	0	0	.
chr2	207111229	207111230	chr2:207111230:G:A	rs2244786	G	A	A	Sox2_MA0143.3	-15	0	+	0	0	.
chr2	207155539	207155540	chr2:207155540:A:G	rs62188627	A	G	A	Sox2_MA0143.3	-11	0	-	0	0	.
chr2	207155905	207155906	chr2:207155906:G:A	rs6435364	G	A	G	Sox2_MA0143.3	25	0	+	0	0	.
chr2	207166832	207166833	chr2:207166833:C:T	rs1364395595	C	T	C	Sox2_MA0143.3	25	0	-	0	0	.
chr2	207166856	207166857	chr2:207166857:G:A	rs893278962	G	A	G	Sox2_MA0143.3	1	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr2	207176514	207176515	chr2:207176515:A:G	rs16839361	A	G	A	Sox2_MA0143.3	-12	0	+	0	0	.
chr2	207304831	207304832	chr2:207304832:A:T	rs2216781	A	T	T	Sox2_MA0143.3	-13	0	+	0	0	.
chr2	207304867	207304868	chr2:207304868:G:T	rs16839580	G	T	G	Sox2_MA0143.3	23	0	+	0	0	.
chr2	207470785	207470786	chr2:207470786:C:T	rs4142221	C	T	C	Sox2_MA0143.3	7	1	+	9.019595766176417	9.613475778572903	CCATTGTC
chr2	207472708	207472709	chr2:207472709:C:T	rs78701191	C	T	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr2	207488287	207488288	chr2:207488288:C:T	rs918846	C	T	C	Sox2_MA0143.3	27	0	-	0	0	.
chr2	207491065	207491066	chr2:207491066:T:G	rs918843	T	G	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr2	207491084	207491085	chr2:207491085:T:C	rs11694965	T	C	T	Sox2_MA0143.3	6	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr2	207624515	207624516	chr2:207624516:A:C	rs1417909682	A	C	A	Sox2_MA0143.3	-14	0	+	0	0	.
chr2	207624883	207624884	chr2:207624884:A:T	rs150597618	A	T	A	Sox2_MA0143.3	-2	0	-	0	0	.
chr2	207810662	207810663	chr2:207810663:G:A	rs553563495	G	A	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr2	207840366	207840367	chr2:207840367:C:A	rs7574706	C	A	.	Sox2_MA0143.3	0	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr2	207848130	207848131	chr2:207848131:A:G	rs2127685	A	G	G	Sox2_MA0143.3	4	1	-	9.800647049772198	2.8918922704569785	CCTTTGTT
chr2	207870381	207870382	chr2:207870382:C:T	rs10932212	C	T	C	Sox2_MA0143.3	26	0	+	0	0	.
chr2	207902240	207902241	chr2:207902241:C:T	rs7563348	C	T	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr2	207902260	207902261	chr2:207902261:T:C	rs7577449	T	C	T	Sox2_MA0143.3	17	0	+	0	0	.
chr2	208000905	208000906	chr2:208000906:G:A	rs529096705	G	A	G	Sox2_MA0143.3	9	0	-	0	0	.
chr2	208000906	208000907	chr2:208000907:A:G	rs548744383	A	G	A	Sox2_MA0143.3	8	0	-	0	0	.
chr2	208033819	208033820	chr2:208033820:A:T	rs13005382	A	T	T	Sox2_MA0143.3	-16	0	+	0	0	.
chr2	208125453	208125454	chr2:208125454:G:C	rs74881867	G	C	G	Sox2_MA0143.3	1	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr2	208135419	208135420	chr2:208135420:G:A	rs4289171	G	A	G	Sox2_MA0143.3	15	0	+	0	0	.
chr2	208151126	208151127	chr2:208151127:T:C	rs796265	T	C	G	Sox2_MA0143.3	4	1	+	8.676919043985553	1.7681642646703322	CCATTGTG
chr2	208183120	208183121	chr2:208183121:A:C	rs185041061	A	C	A	Sox2_MA0143.3	4	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr2	208269300	208269301	chr2:208269301:A:G	rs7564882	A	G	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr2	208269310	208269311	chr2:208269311:T:C	rs7605498	T	C	t	Sox2_MA0143.3	3	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr2	208359111	208359112	chr2:208359112:G:A	rs546773432	G	A	G	Sox2_MA0143.3	21	0	-	0	0	.
chr2	208363922	208363923	chr2:208363923:A:G	rs28885800	A	G	G	Sox2_MA0143.3	9	0	+	0	0	.
chr2	208424057	208424058	chr2:208424058:G:A	rs10172822	G	A	G	Sox2_MA0143.3	0	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr2	208828115	208828116	chr2:208828116:T:A	rs75357650	T	A	T	Sox2_MA0143.3	-7	0	+	0	0	.
chr2	208983712	208983713	chr2:208983713:C:A	rs73058267	C	A	C	Sox2_MA0143.3	25	0	-	0	0	.
chr2	208983739	208983740	chr2:208983740:A:G	rs539097018	A	G	A	Sox2_MA0143.3	-2	0	-	0	0	.
chr2	209141255	209141256	chr2:209141256:G:A	rs17676441	G	A	G	Sox2_MA0143.3	18	0	+	0	0	.
chr2	209172649	209172650	chr2:209172650:A:G	rs10168962	A	G	A	Sox2_MA0143.3	-1	0	-	0	0	.
chr2	209209670	209209671	chr2:209209671:G:T	rs16842610	G	T	G	Sox2_MA0143.3	27	0	-	0	0	.
chr2	209209675	209209676	chr2:209209676:G:A	rs551065924	G	A	G	Sox2_MA0143.3	22	0	-	0	0	.
chr2	209261913	209261914	chr2:209261914:T:A	rs12471306	T	A	A	Sox2_MA0143.3	-14	0	+	0	0	.
chr2	209296414	209296415	chr2:209296415:C:T	rs73006151	C	T	C	Sox2_MA0143.3	15	0	+	0	0	.
chr2	209426138	209426139	chr2:209426139:A:G	rs7595691	A	G	A	Sox2_MA0143.3	13	0	+	0	0	.
chr2	209488322	209488323	chr2:209488323:A:G	rs115045676	A	G	A	Sox2_MA0143.3	4	1	-	8.864090315184848	1.9553355358696274	CCTTTGTG
chr2	209579320	209579321	chr2:209579321:C:A	rs16843177	C	A	C	Sox2_MA0143.3	-5	0	-	0	0	.
chr2	209865121	209865122	chr2:209865122:C:G	rs145138420	C	G	C	Sox2_MA0143.3	24	0	+	0	0	.
chr2	210005443	210005444	chr2:210005444:C:T	rs112020963	C	T	C	Sox2_MA0143.3	5	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr2	210304789	210304790	chr2:210304790:C:G	rs118095529	C	G	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr2	210363979	210363980	chr2:210363980:T:G	rs78744606	T	G	T	Sox2_MA0143.3	18	0	-	0	0	.
chr2	210503633	210503634	chr2:210503634:C:G	rs3845634	C	G	G	Sox2_MA0143.3	7	1	+	9.206767037375712	8.864090315184848	CCTTTGTC
chr2	210763086	210763087	chr2:210763087:A:G	rs116210822	A	G	A	Sox2_MA0143.3	-11	0	+	0	0	.
chr2	210814605	210814606	chr2:210814606:C:G	rs12328193	C	G	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr2	210899292	210899293	chr2:210899293:C:A	rs60761085	C	A	A	Sox2_MA0143.3	-9	0	+	0	0	.
chr2	211401561	211401562	chr2:211401562:A:G	rs556879935	A	G	A	Sox2_MA0143.3	20	0	+	0	0	.
chr2	211407888	211407889	chr2:211407889:G:A	rs3791697	G	A	A	Sox2_MA0143.3	-15	0	-	0	0	.
chr2	211455384	211455385	chr2:211455385:G:A	rs147707112	G	A	G	Sox2_MA0143.3	7	1	-	9.019595766176417	9.613475778572903	CCATTGTC
chr2	211455385	211455386	chr2:211455386:A:T	rs13386439	A	T	A	Sox2_MA0143.3	6	1	-	9.019595766176417	2.110840986861197	CCATTGTC
chr2	211509722	211509723	chr2:211509723:A:G	rs1851187	A	G	A	Sox2_MA0143.3	-18	0	-	0	0	.
chr2	211720339	211720340	chr2:211720340:G:C	rs6435664	G	C	C	Sox2_MA0143.3	5	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr2	211822765	211822766	chr2:211822766:G:A	rs16846873	G	A	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr2	211822777	211822778	chr2:211822778:A:C	rs67623637	A	C	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr2	211831273	211831274	chr2:211831274:C:T	rs10932402	C	T	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr2	211923263	211923264	chr2:211923264:A:G	rs10172967	A	G	A	Sox2_MA0143.3	14	0	-	0	0	.
chr2	212073500	212073501	chr2:212073501:A:G	rs76077803	A	G	A	Sox2_MA0143.3	24	0	+	0	0	.
chr2	212300181	212300182	chr2:212300182:A:C	rs1857795	A	C	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr2	212385336	212385337	chr2:212385337:G:C	rs12477300	G	C	G	Sox2_MA0143.3	1	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr2	212388513	212388514	chr2:212388514:A:T	rs6723528	A	T	T	Sox2_MA0143.3	23	0	-	0	0	.
chr2	212452346	212452347	chr2:212452347:C:A	rs6710782	C	A	C	Sox2_MA0143.3	0	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr2	212857829	212857830	chr2:212857830:T:C	rs4480940	T	C	T	Sox2_MA0143.3	12	0	-	0	0	.
chr2	212881271	212881272	chr2:212881272:A:G	rs11904012	A	G	a	Sox2_MA0143.3	-1	0	+	0	0	.
chr2	212906610	212906611	chr2:212906611:T:C	rs4672662	T	C	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr2	212906614	212906615	chr2:212906615:C:G	rs10170031	C	G	C	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr2	213105491	213105492	chr2:213105492:C:T	rs73077283	C	T	C	Sox2_MA0143.3	12	0	+	0	0	.
chr2	213224556	213224557	chr2:213224557:T:C	rs7600041	T	C	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr2	213239054	213239055	chr2:213239055:C:T	rs10497997	C	T	C	Sox2_MA0143.3	15	0	-	0	0	.
chr2	213239067	213239068	chr2:213239068:T:A	rs185786906	T	A	T	Sox2_MA0143.3	2	1	-	9.019595766176417	9.206767037375712	CCATTGTC
chr2	213827635	213827636	chr2:213827636:T:G	rs2556326	T	G	T	Sox2_MA0143.3	19	0	+	0	0	.
chr2	214103719	214103720	chr2:214103720:T:G	rs16851487	T	G	G	Sox2_MA0143.3	-3	0	-	0	0	.
chr2	214329093	214329094	chr2:214329094:C:T	rs533689854	C	T	C	Sox2_MA0143.3	13	0	-	0	0	.
chr2	214541400	214541401	chr2:214541401:T:C	rs11904475	T	C	C	Sox2_MA0143.3	6	1	+	9.019595766176417	2.110840986861197	CCATTGTC
chr2	214637275	214637276	chr2:214637276:C:A	rs4672720	C	A	C	Sox2_MA0143.3	11	0	+	0	0	.
chr2	214718728	214718729	chr2:214718729:A:G	rs13415265	A	G	A	Sox2_MA0143.3	-3	0	-	0	0	.
chr2	214892052	214892053	chr2:214892053:A:G	rs11902136	A	G	A	Sox2_MA0143.3	-15	0	-	0	0	.
chr2	215002422	215002423	chr2:215002423:A:G	rs145089991	A	G	A	Sox2_MA0143.3	16	0	-	0	0	.
chr2	215280084	215280085	chr2:215280085:C:T	rs7579065	C	T	C	Sox2_MA0143.3	1	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr2	215353993	215353994	chr2:215353994:C:T	rs6706415	C	T	C	Sox2_MA0143.3	18	0	+	0	0	.
chr2	215363727	215363728	chr2:215363728:G:A	rs546972158	G	A	g	Sox2_MA0143.3	13	0	-	0	0	.
chr2	215365596	215365597	chr2:215365597:A:G	rs963815872	A	G	A	Sox2_MA0143.3	-15	0	+	0	0	.
chr2	215432136	215432137	chr2:215432137:G:A	rs7567647	G	A	A	Sox2_MA0143.3	27	0	-	0	0	.
chr2	215434826	215434827	chr2:215434827:G:A	rs2577290	G	A	G	Sox2_MA0143.3	21	0	+	0	0	.
chr2	215434827	215434828	chr2:215434828:C:A	rs2692234	C	A	C	Sox2_MA0143.3	22	0	+	0	0	.
chr2	215598444	215598445	chr2:215598445:G:C	rs142959074	G	C	G	Sox2_MA0143.3	22	0	+	0	0	.
chr2	215653908	215653909	chr2:215653909:C:G	rs10187569	C	G	C	Sox2_MA0143.3	23	0	+	0	0	.
chr2	215669511	215669512	chr2:215669512:A:G	rs869140	A	G	A	Sox2_MA0143.3	-12	0	-	0	0	.
chr2	215693099	215693100	chr2:215693100:A:G	rs186203324	A	G	A	Sox2_MA0143.3	-19	0	+	0	0	.
chr2	215693117	215693118	chr2:215693118:G:A	rs77233673	G	A	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr2	215745332	215745333	chr2:215745333:T:C	rs76455880	T	C	T	Sox2_MA0143.3	26	0	+	0	0	.
chr2	215856094	215856095	chr2:215856095:A:T	rs4076919	A	T	A	Sox2_MA0143.3	-9	0	+	0	0	.
chr2	216006482	216006483	chr2:216006483:G:A	rs115408525	G	A	G	Sox2_MA0143.3	17	0	+	0	0	.
chr2	216029528	216029529	chr2:216029529:C:G	rs112289571	C	G	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr2	216114956	216114957	chr2:216114957:G:C	rs41297752	G	C	G	Sox2_MA0143.3	9	0	-	0	0	.
chr2	216199640	216199641	chr2:216199641:G:A	rs7573191	G	A	A	Sox2_MA0143.3	20	0	+	0	0	.
chr2	216306991	216306992	chr2:216306992:A:G	rs147191645	A	G	A	Sox2_MA0143.3	-16	0	+	0	0	.
chr2	216322017	216322018	chr2:216322018:T:C	rs6728666	T	C	C	Sox2_MA0143.3	16	0	+	0	0	.
chr2	216343619	216343620	chr2:216343620:T:C	rs4674079	T	C	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr2	216408698	216408699	chr2:216408699:A:G	rs544932308	A	G	A	Sox2_MA0143.3	4	1	-	8.864090315184848	1.9553355358696274	CCTTTGTG
chr2	216417488	216417489	chr2:216417489:C:G	rs2449774	C	G	C	Sox2_MA0143.3	12	0	+	0	0	.
chr2	216498987	216498988	chr2:216498988:C:G	rs151229729	C	G	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr2	216617471	216617472	chr2:216617472:C:T	rs112606693	C	T	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr2	216635778	216635779	chr2:216635779:G:A	rs1234444608	G	A	G	Sox2_MA0143.3	13	0	-	0	0	.
chr2	216776227	216776228	chr2:216776228:G:A	rs143749794	G	A	G	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr2	216782359	216782360	chr2:216782360:A:G	rs10168542	A	G	A	Sox2_MA0143.3	-10	0	-	0	0	.
chr2	216873576	216873577	chr2:216873577:T:A	rs12993812	T	A	T	Sox2_MA0143.3	10	0	-	0	0	.
chr2	216880911	216880912	chr2:216880912:C:T	rs115698814	C	T	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr2	216880922	216880923	chr2:216880923:C:G	rs149428631	C	G	C	Sox2_MA0143.3	1	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr2	216941673	216941674	chr2:216941674:C:T	rs2253540	C	T	T	Sox2_MA0143.3	24	0	+	0	0	.
chr2	216991380	216991381	chr2:216991381:T:C	rs75047916	T	C	T	Sox2_MA0143.3	-1	0	+	0	0	.
chr2	216991737	216991738	chr2:216991738:C:T	rs2542196	C	T	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr2	217046780	217046781	chr2:217046781:G:A	rs6708579	G	A	A	Sox2_MA0143.3	-3	0	+	0	0	.
chr2	217071361	217071362	chr2:217071362:G:C	rs34422916	G	C	C	Sox2_MA0143.3	19	0	+	0	0	.
chr2	217071366	217071367	chr2:217071367:T:G	rs73992709	T	G	T	Sox2_MA0143.3	24	0	+	0	0	.
chr2	217075384	217075385	chr2:217075385:G:A	rs139963454	G	A	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr2	217225784	217225785	chr2:217225785:T:A	rs113778920	T	A	T	Sox2_MA0143.3	27	0	+	0	0	.
chr2	217374702	217374703	chr2:217374703:A:G	rs714862	A	G	A	Sox2_MA0143.3	14	0	+	0	0	.
chr2	217409976	217409977	chr2:217409977:T:C	rs11674838	T	C	C	Sox2_MA0143.3	19	0	+	0	0	.
chr2	217418579	217418580	chr2:217418580:T:G	rs13395110	T	G	T	Sox2_MA0143.3	2	1	-	9.613475778572903	3.494828071296623	CCATTGTT
chr2	217421375	217421376	chr2:217421376:C:T	rs11678088	C	T	T	Sox2_MA0143.3	-16	0	+	0	0	.
chr2	217558513	217558514	chr2:217558514:T:C	rs13007483	T	C	T	Sox2_MA0143.3	-19	0	+	0	0	.
chr2	217558856	217558857	chr2:217558857:A:G	rs12185655	A	G	G	Sox2_MA0143.3	2	1	+	8.676919043985553	2.5582713367092715	CCATTGTG
chr2	217574119	217574120	chr2:217574120:C:T	rs6714500	C	T	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr2	217611952	217611953	chr2:217611953:G:A	rs141403300	G	A	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr2	217628206	217628207	chr2:217628207:C:A	rs79590139	C	A	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr2	217672270	217672271	chr2:217672271:T:A	rs1430124	T	A	A	Sox2_MA0143.3	2	1	+	8.864090315184848	8.676919043985553	CCTTTGTG
chr2	217672285	217672286	chr2:217672286:C:T	rs1430123	C	T	c	Sox2_MA0143.3	17	0	+	0	0	.
chr2	217706466	217706467	chr2:217706467:A:G	rs7560170	A	G	A	Sox2_MA0143.3	-17	0	-	0	0	.
chr2	217719221	217719222	chr2:217719222:C:T	rs7562385	C	T	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr2	217729519	217729520	chr2:217729520:T:C	rs77663501	T	C	C	Sox2_MA0143.3	6	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr2	217733687	217733688	chr2:217733688:G:A	rs144307409	G	A	G	Sox2_MA0143.3	1	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr2	217747733	217747734	chr2:217747734:G:A	rs10932729	G	A	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr2	217802648	217802649	chr2:217802649:T:C	rs3791979	T	C	C	Sox2_MA0143.3	12	0	-	0	0	.
chr2	217807933	217807934	chr2:217807934:C:T	rs2241451	C	T	C	Sox2_MA0143.3	27	0	-	0	0	.
chr2	217836320	217836321	chr2:217836321:G:A	rs191960782	G	A	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr2	217843891	217843892	chr2:217843892:T:G	rs73074375	T	G	T	Sox2_MA0143.3	12	0	+	0	0	.
chr2	217846716	217846717	chr2:217846717:A:G	rs58343915	A	G	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr2	217847014	217847015	chr2:217847015:C:A	rs987338	C	A	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr2	217856449	217856450	chr2:217856450:T:C	rs117021595	T	C	T	Sox2_MA0143.3	-10	0	+	0	0	.
chr2	217902450	217902451	chr2:217902451:C:G	rs3791937	C	G	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr2	217947649	217947650	chr2:217947650:G:A	rs191759874	G	A	G	Sox2_MA0143.3	20	0	-	0	0	.
chr2	217954774	217954775	chr2:217954775:C:T	rs3791892	C	T	T	Sox2_MA0143.3	-16	0	+	0	0	.
chr2	217954803	217954804	chr2:217954804:C:T	rs3791891	C	T	T	Sox2_MA0143.3	13	0	+	0	0	.
chr2	217957930	217957931	chr2:217957931:T:A	rs560798620	T	A	T	Sox2_MA0143.3	11	0	-	0	0	.
chr2	218039297	218039298	chr2:218039298:T:C	rs58842998	T	C	T	Sox2_MA0143.3	2	1	-	9.613475778572903	3.494828071296623	CCATTGTT
chr2	218199667	218199668	chr2:218199668:T:A	rs10932761	T	A	T	Sox2_MA0143.3	22	0	+	0	0	.
chr2	218216187	218216188	chr2:218216188:G:A	rs79221228	G	A	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr2	218259045	218259046	chr2:218259046:A:G	rs10203642	A	G	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr2	218281736	218281737	chr2:218281737:G:C	rs77010107	G	C	G	Sox2_MA0143.3	0	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr2	218406959	218406960	chr2:218406960:C:T	rs116156085	C	T	C	Sox2_MA0143.3	8	0	+	0	0	.
chr2	218419078	218419079	chr2:218419079:A:T	rs148806615	A	T	A	Sox2_MA0143.3	19	0	-	0	0	.
chr2	218419092	218419093	chr2:218419093:C:A	chr2:218419093:C:A	C	A	C	Sox2_MA0143.3	5	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr2	218745994	218745995	chr2:218745995:A:T	rs142558929	A	T	A	Sox2_MA0143.3	2	1	+	9.613475778572903	9.800647049772198	CCATTGTT
chr2	218746004	218746005	chr2:218746005:C:T	rs11898059	C	T	C	Sox2_MA0143.3	12	0	+	0	0	.
chr2	218813697	218813698	chr2:218813698:C:T	rs691066	C	T	T	Sox2_MA0143.3	-18	0	+	0	0	.
chr2	218833280	218833281	chr2:218833281:A:G	rs6731254	A	G	G	Sox2_MA0143.3	3	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr2	218847097	218847098	chr2:218847098:C:T	rs145568476	C	T	-	Sox2_MA0143.3	18	0	-	0	0	.
chr2	218915332	218915333	chr2:218915333:T:C	rs143781674	T	C	T	Sox2_MA0143.3	-8	0	+	0	0	.
chr2	218953442	218953443	chr2:218953443:A:G	rs114892362	A	G	A	Sox2_MA0143.3	-5	0	+	0	0	.
chr2	219199647	219199648	chr2:219199648:C:T	rs149163833	C	T	C	Sox2_MA0143.3	16	0	+	0	0	.
chr2	219200827	219200828	chr2:219200828:G:C	rs114672818	G	C	a	Sox2_MA0143.3	0	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr2	219200827	219200828	chr2:219200828:G:T	chr2:219200828:G:T	G	T	a	Sox2_MA0143.3	0	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr2	219200843	219200844	chr2:219200844:G:A	rs759008951	G	A	g	Sox2_MA0143.3	-16	0	-	0	0	.
chr2	219200845	219200846	chr2:219200846:G:A	rs188942335	G	A	g	Sox2_MA0143.3	-18	0	-	0	0	.
chr2	219277240	219277241	chr2:219277241:A:T	rs4674372	A	T	A	Sox2_MA0143.3	9	0	+	0	0	.
chr2	219362945	219362946	chr2:219362946:G:C	rs12475692	G	C	G	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr2	219433808	219433809	chr2:219433809:T:G	chr2:219433809:T:G	T	G	T	Sox2_MA0143.3	-13	0	-	0	0	.
chr2	219469356	219469357	chr2:219469357:C:T	rs200872790	C	T	c	Sox2_MA0143.3	-19	0	-	0	0	.
chr2	219538227	219538228	chr2:219538228:C:T	rs1077661	C	T	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr2	219538230	219538231	chr2:219538231:C:T	rs563202355	C	T	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr2	219624939	219624940	chr2:219624940:T:G	rs114311839	T	G	T	Sox2_MA0143.3	2	1	+	8.864090315184848	2.5582713367092715	CCTTTGTG
chr2	219644932	219644933	chr2:219644933:C:T	rs35155682	C	T	T	Sox2_MA0143.3	-13	0	-	0	0	.
chr2	219699176	219699177	chr2:219699177:G:C	rs35003948	G	C	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr2	219857043	219857044	chr2:219857044:G:A	chr2:219857044:G:A	G	A	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr2	219857049	219857050	chr2:219857050:G:C	chr2:219857050:G:C	G	C	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr2	219896228	219896229	chr2:219896229:T:C	rs10469778	T	C	T	Sox2_MA0143.3	-15	0	+	0	0	.
chr2	219968500	219968501	chr2:219968501:G:A	rs10221578	G	A	A	Sox2_MA0143.3	5	1	+	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr2	219973351	219973352	chr2:219973352:A:G	rs7606516	A	G	A	Sox2_MA0143.3	-15	0	+	0	0	.
chr2	219976744	219976745	chr2:219976745:A:G	rs34877863	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr2	219985176	219985177	chr2:219985177:C:T	rs12694496	C	T	C	Sox2_MA0143.3	15	0	+	0	0	.
chr2	220070498	220070499	chr2:220070499:T:C	rs13034544	T	C	T	Sox2_MA0143.3	-11	0	+	0	0	.
chr2	220122216	220122217	chr2:220122217:T:C	rs4467258	T	C	C	Sox2_MA0143.3	21	0	+	0	0	.
chr2	220127888	220127889	chr2:220127889:G:C	rs4364011	G	C	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr2	220183070	220183071	chr2:220183071:T:C	rs6711809	T	C	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr2	220212822	220212823	chr2:220212823:C:T	rs6750498	C	T	C	Sox2_MA0143.3	5	1	-	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr2	220935955	220935956	chr2:220935956:G:T	rs190436492	G	T	G	Sox2_MA0143.3	-14	0	+	0	0	.
chr2	220962121	220962122	chr2:220962122:T:A	rs66491629	T	A	T	Sox2_MA0143.3	23	0	-	0	0	.
chr2	220963031	220963032	chr2:220963032:C:T	rs13022935	C	T	T	Sox2_MA0143.3	-9	0	-	0	0	.
chr2	221040464	221040465	chr2:221040465:C:T	rs12471062	C	T	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr2	221048921	221048922	chr2:221048922:C:T	rs7420360	C	T	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr2	221360333	221360334	chr2:221360334:A:C	rs1430232	A	C	A	Sox2_MA0143.3	23	0	+	0	0	.
chr2	221486067	221486068	chr2:221486068:C:T	rs13012429	C	T	C	Sox2_MA0143.3	0	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr2	221501770	221501771	chr2:221501771:C:T	rs149612976	C	T	C	Sox2_MA0143.3	22	0	-	0	0	.
chr2	221505055	221505056	chr2:221505056:T:C	rs13035425	T	C	T	Sox2_MA0143.3	-15	0	-	0	0	.
chr2	221555369	221555370	chr2:221555370:C:A	rs142531322	C	A	C	Sox2_MA0143.3	27	0	+	0	0	.
chr2	221618138	221618139	chr2:221618139:A:G	rs928195560	A	G	A	Sox2_MA0143.3	-10	0	-	0	0	.
chr2	221636293	221636294	chr2:221636294:T:G	rs1914950	T	G	G	Sox2_MA0143.3	16	0	+	0	0	.
chr2	221831360	221831361	chr2:221831361:T:G	chr2:221831361:T:G	T	G	T	Sox2_MA0143.3	-17	0	-	0	0	.
chr2	221884433	221884434	chr2:221884434:G:T	rs77012407	G	T	G	Sox2_MA0143.3	8	0	+	0	0	.
chr2	221982120	221982121	chr2:221982121:G:C	rs16863256	G	C	G	Sox2_MA0143.3	15	0	+	0	0	.
chr2	222085957	222085958	chr2:222085958:G:A	rs348998	G	A	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr2	222095203	222095204	chr2:222095204:A:G	rs349014	A	G	G	Sox2_MA0143.3	21	0	-	0	0	.
chr2	222227226	222227227	chr2:222227227:G:A	rs16863533	G	A	G	Sox2_MA0143.3	11	0	+	0	0	.
chr2	222241799	222241800	chr2:222241800:A:G	rs11679619	A	G	A	Sox2_MA0143.3	4	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr2	222241806	222241807	chr2:222241807:G:A	rs12053273	G	A	G	Sox2_MA0143.3	-3	0	-	0	0	.
chr2	222295773	222295774	chr2:222295774:C:T	rs45441600	C	T	C	Sox2_MA0143.3	0	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr2	222426918	222426919	chr2:222426919:C:G	chr2:222426919:C:G	C	G	C	Sox2_MA0143.3	22	0	+	0	0	.
chr2	222441369	222441370	chr2:222441370:G:T	rs77817995	G	T	G	Sox2_MA0143.3	1	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr2	222670737	222670738	chr2:222670738:A:G	rs10169223	A	G	A	Sox2_MA0143.3	-1	0	+	0	0	.
chr2	222709826	222709827	chr2:222709827:A:G	rs142300173	A	G	A	Sox2_MA0143.3	20	0	-	0	0	.
chr2	222742351	222742352	chr2:222742352:T:A	rs7580804	T	A	T	Sox2_MA0143.3	13	0	+	0	0	.
chr2	222756791	222756792	chr2:222756792:G:A	rs870998	G	A	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr2	222756807	222756808	chr2:222756808:C:T	rs977758223	C	T	C	Sox2_MA0143.3	8	0	+	0	0	.
chr2	222806846	222806847	chr2:222806847:C:T	rs2084182	C	T	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr2	222860265	222860266	chr2:222860266:A:T	rs61416407	A	T	A	Sox2_MA0143.3	23	0	-	0	0	.
chr2	222899847	222899848	chr2:222899848:C:G	rs13034896	C	G	C	Sox2_MA0143.3	10	0	+	0	0	.
chr2	222965823	222965824	chr2:222965824:G:T	rs112021420	G	T	G	Sox2_MA0143.3	8	0	+	0	0	.
chr2	222985376	222985377	chr2:222985377:C:G	rs62185069	C	G	G	Sox2_MA0143.3	-16	0	-	0	0	.
chr2	223008981	223008982	chr2:223008982:A:G	rs10200334	A	G	G	Sox2_MA0143.3	22	0	+	0	0	.
chr2	223036937	223036938	chr2:223036938:T:G	rs1837494	T	G	T	Sox2_MA0143.3	22	0	+	0	0	.
chr2	223047138	223047139	chr2:223047139:T:A	rs4674737	T	A	T	Sox2_MA0143.3	12	0	-	0	0	.
chr2	223315785	223315786	chr2:223315786:G:A	rs1517629	G	A	G	Sox2_MA0143.3	13	0	+	0	0	.
chr2	223315790	223315791	chr2:223315791:G:T	rs1517630	G	T	G	Sox2_MA0143.3	18	0	+	0	0	.
chr2	223465012	223465013	chr2:223465013:A:C	rs77165745	A	C	A	Sox2_MA0143.3	-11	0	+	0	0	.
chr2	223469131	223469132	chr2:223469132:A:G	rs1371541	A	G	A	Sox2_MA0143.3	14	0	+	0	0	.
chr2	223478904	223478905	chr2:223478905:A:T	rs4674785	A	T	T	Sox2_MA0143.3	-5	0	+	0	0	.
chr2	223500560	223500561	chr2:223500561:C:T	rs75705402	C	T	C	Sox2_MA0143.3	18	0	-	0	0	.
chr2	223647975	223647976	chr2:223647976:T:A	rs17239967	T	A	T	Sox2_MA0143.3	25	0	+	0	0	.
chr2	223768079	223768080	chr2:223768080:C:T	rs77492075	C	T	C	Sox2_MA0143.3	25	0	-	0	0	.
chr2	223776379	223776380	chr2:223776380:C:T	rs28711800	C	T	C	Sox2_MA0143.3	25	0	-	0	0	.
chr2	223832491	223832492	chr2:223832492:A:G	rs17244479	A	G	A	Sox2_MA0143.3	11	0	-	0	0	.
chr2	223832516	223832517	chr2:223832517:T:C	rs562980993	T	C	T	Sox2_MA0143.3	-14	0	-	0	0	.
chr2	224007702	224007703	chr2:224007703:C:T	rs75965372	C	T	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr2	224039406	224039407	chr2:224039407:C:T	rs576117524	C	T	c	Sox2_MA0143.3	12	0	+	0	0	.
chr2	224039413	224039414	chr2:224039414:C:T	rs184349359	C	T	c	Sox2_MA0143.3	19	0	+	0	0	.
chr2	224086929	224086930	chr2:224086930:C:G	rs10498158	C	G	G	Sox2_MA0143.3	5	1	-	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr2	224261330	224261331	chr2:224261331:T:C	rs10174003	T	C	T	Sox2_MA0143.3	16	0	+	0	0	.
chr2	224287847	224287848	chr2:224287848:T:C	rs1861985	T	C	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr2	224329045	224329046	chr2:224329046:T:A	rs1301052903	T	A	C	Sox2_MA0143.3	25	0	-	0	0	.
chr2	224444656	224444657	chr2:224444657:A:G	rs2710598	A	G	A	Sox2_MA0143.3	-17	0	-	0	0	.
chr2	224658967	224658968	chr2:224658968:T:G	rs11903959	T	G	T	Sox2_MA0143.3	-17	0	-	0	0	.
chr2	224800475	224800476	chr2:224800476:C:T	rs6717059	C	T	T	Sox2_MA0143.3	-8	0	+	0	0	.
chr2	224838107	224838108	chr2:224838108:A:C	rs16866215	A	C	A	Sox2_MA0143.3	-3	0	-	0	0	.
chr2	224884439	224884440	chr2:224884440:C:T	rs6750856	C	T	T	Sox2_MA0143.3	0	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr2	224925170	224925171	chr2:224925171:C:T	rs6716445	C	T	T	Sox2_MA0143.3	0	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr2	225002234	225002235	chr2:225002235:G:T	rs149755026	G	T	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr2	225002612	225002613	chr2:225002613:T:C	rs12478364	T	C	C	Sox2_MA0143.3	13	0	-	0	0	.
chr2	225002630	225002631	chr2:225002631:G:A	rs12474176	G	A	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr2	225289903	225289904	chr2:225289904:T:C	rs11682061	T	C	T	Sox2_MA0143.3	4	1	+	3.5547341015215945	-3.3540206777936254	CCTTTGTA
chr2	225367817	225367818	chr2:225367818:T:A	rs1028176	T	A	A	Sox2_MA0143.3	-9	0	+	0	0	.
chr2	225367847	225367848	chr2:225367848:T:G	rs1028175	T	G	G	Sox2_MA0143.3	21	0	+	0	0	.
chr2	225415080	225415081	chr2:225415081:A:C	rs16866585	A	C	A	Sox2_MA0143.3	-4	0	-	0	0	.
chr2	225415776	225415777	chr2:225415777:T:C	rs961651	T	C	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr2	225649662	225649663	chr2:225649663:C:T	rs7562523	C	T	C	Sox2_MA0143.3	8	0	+	0	0	.
chr2	225820641	225820642	chr2:225820642:T:A	rs1446459	T	A	A	Sox2_MA0143.3	13	0	-	0	0	.
chr2	225889880	225889881	chr2:225889881:A:C	rs12694684	A	C	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr2	225949185	225949186	chr2:225949186:T:C	rs1589153	T	C	C	Sox2_MA0143.3	10	0	-	0	0	.
chr2	226001244	226001245	chr2:226001245:A:G	rs908719	A	G	G	Sox2_MA0143.3	3	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr2	226084891	226084892	chr2:226084892:G:A	rs2204176	G	A	A	Sox2_MA0143.3	-7	0	+	0	0	.
chr2	226084906	226084907	chr2:226084907:T:A	rs2204177	T	A	T	Sox2_MA0143.3	8	0	+	0	0	.
chr2	226117491	226117492	chr2:226117492:A:G	rs1522805	A	G	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr2	226180738	226180739	chr2:226180739:C:T	rs79748111	C	T	C	Sox2_MA0143.3	15	0	+	0	0	.
chr2	226274230	226274231	chr2:226274231:G:A	rs1399625	G	A	G	Sox2_MA0143.3	8	0	+	0	0	.
chr2	226275312	226275313	chr2:226275313:C:T	rs2673130	C	T	C	Sox2_MA0143.3	15	0	+	0	0	.
chr2	226439933	226439934	chr2:226439934:C:T	rs13002287	C	T	C	Sox2_MA0143.3	24	0	-	0	0	.
chr2	226442762	226442763	chr2:226442763:G:A	rs11901094	G	A	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr2	226450231	226450232	chr2:226450232:G:T	rs566442799	G	T	G	Sox2_MA0143.3	8	0	-	0	0	.
chr2	226524370	226524371	chr2:226524371:C:T	rs73992179	C	T	C	Sox2_MA0143.3	-5	0	-	0	0	.
chr2	226650401	226650402	chr2:226650402:G:A	rs555202800	G	A	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr2	226759296	226759297	chr2:226759297:G:A	rs16822615	G	A	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr2	226792443	226792444	chr2:226792444:A:T	rs145974855	A	T	A	Sox2_MA0143.3	6	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr2	226843179	226843180	chr2:226843180:A:G	rs111276880	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr2	226904151	226904152	chr2:226904152:G:A	rs12622456	G	A	A	Sox2_MA0143.3	8	0	+	0	0	.
chr2	226970740	226970741	chr2:226970741:G:T	chr2:226970741:G:T	G	T	G	Sox2_MA0143.3	-2	0	+	0	0	.
chr2	227031935	227031936	chr2:227031936:C:G	rs13423714	C	G	C	Sox2_MA0143.3	14	0	+	0	0	.
chr2	227188424	227188425	chr2:227188425:A:G	rs566513197	A	G	A	Sox2_MA0143.3	20	0	+	0	0	.
chr2	227214653	227214654	chr2:227214654:C:T	rs77340490	C	T	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr2	227235657	227235658	chr2:227235658:T:C	rs11889232	T	C	C	Sox2_MA0143.3	22	0	+	0	0	.
chr2	227238006	227238007	chr2:227238007:G:C	rs13424243	G	C	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr2	227329853	227329854	chr2:227329854:G:A	rs6706656	G	A	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr2	227388892	227388893	chr2:227388893:G:A	rs4075150	G	A	g	Sox2_MA0143.3	-8	0	+	0	0	.
chr2	227388919	227388920	chr2:227388920:C:T	rs148996505	C	T	c	Sox2_MA0143.3	19	0	+	0	0	.
chr2	227388922	227388923	chr2:227388923:G:A	chr2:227388923:G:A	G	A	g	Sox2_MA0143.3	22	0	+	0	0	.
chr2	227390856	227390857	chr2:227390857:T:C	rs73090187	T	C	t	Sox2_MA0143.3	16	0	+	0	0	.
chr2	227392736	227392737	chr2:227392737:T:C	rs6713514	T	C	T	Sox2_MA0143.3	3	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr2	227428890	227428891	chr2:227428891:T:C	rs73994613	T	C	T	Sox2_MA0143.3	-15	0	-	0	0	.
chr2	227472986	227472987	chr2:227472987:G:A	rs868693869	G	A	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr2	227503500	227503501	chr2:227503501:A:G	rs73083407	A	G	A	Sox2_MA0143.3	-14	0	+	0	0	.
chr2	227649465	227649466	chr2:227649466:C:T	rs12694740	C	T	T	Sox2_MA0143.3	5	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr2	227672681	227672682	chr2:227672682:C:A	rs13383658	C	A	C	Sox2_MA0143.3	13	0	-	0	0	.
chr2	227705595	227705596	chr2:227705596:A:G	rs114770463	A	G	A	Sox2_MA0143.3	-8	0	-	0	0	.
chr2	227756584	227756585	chr2:227756585:C:T	rs1911137	C	T	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr2	227766503	227766504	chr2:227766504:C:T	rs115047214	C	T	C	Sox2_MA0143.3	17	0	-	0	0	.
chr2	227772396	227772397	chr2:227772397:C:T	rs4458204	C	T	C	Sox2_MA0143.3	20	0	-	0	0	.
chr2	227840004	227840005	chr2:227840005:T:C	rs7423358	T	C	C	Sox2_MA0143.3	3	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr2	227884535	227884536	chr2:227884536:C:A	rs149167576	C	A	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr2	227884561	227884562	chr2:227884562:G:T	rs13405511	G	T	G	Sox2_MA0143.3	14	0	+	0	0	.
chr2	227934079	227934080	chr2:227934080:T:G	rs1721373	T	G	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr2	227940438	227940439	chr2:227940439:G:C	rs1814971	G	C	G	Sox2_MA0143.3	17	0	+	0	0	.
chr2	228018253	228018254	chr2:228018254:T:C	rs3828161	T	C	T	Sox2_MA0143.3	-17	0	+	0	0	.
chr2	228079565	228079566	chr2:228079566:C:T	rs13409615	C	T	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr2	228426826	228426827	chr2:228426827:G:A	rs6436789	G	A	A	Sox2_MA0143.3	-7	0	-	0	0	.
chr2	228519769	228519770	chr2:228519770:A:G	rs111626941	A	G	A	Sox2_MA0143.3	18	0	+	0	0	.
chr2	228576329	228576330	chr2:228576330:C:T	rs141523579	C	T	c	Sox2_MA0143.3	0	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr2	228769177	228769178	chr2:228769178:A:C	rs13409670	A	C	A	Sox2_MA0143.3	-6	0	-	0	0	.
chr2	228799335	228799336	chr2:228799336:G:A	rs114572985	G	A	G	Sox2_MA0143.3	9	0	-	0	0	.
chr2	228875262	228875263	chr2:228875263:C:G	rs187195025	C	G	C	Sox2_MA0143.3	27	0	-	0	0	.
chr2	228875308	228875309	chr2:228875309:C:T	chr2:228875309:C:T	C	T	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr2	228917090	228917091	chr2:228917091:G:C	rs62193778	G	C	G	Sox2_MA0143.3	26	0	-	0	0	.
chr2	228992197	228992198	chr2:228992198:C:T	rs4973140	C	T	T	Sox2_MA0143.3	-5	0	+	0	0	.
chr2	229054360	229054361	chr2:229054361:C:T	rs12612162	C	T	T	Sox2_MA0143.3	21	0	-	0	0	.
chr2	229054385	229054386	chr2:229054386:C:T	rs60550348	C	T	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr2	229128038	229128039	chr2:229128039:G:A	rs1419949	G	A	A	Sox2_MA0143.3	20	0	+	0	0	.
chr2	229344471	229344472	chr2:229344472:T:C	rs142644951	T	C	T	Sox2_MA0143.3	2	1	-	9.613475778572903	3.494828071296623	CCATTGTT
chr2	229475681	229475682	chr2:229475682:G:A	rs6715897	G	A	A	Sox2_MA0143.3	-5	0	+	0	0	.
chr2	229484824	229484825	chr2:229484825:A:G	rs79390017	A	G	A	Sox2_MA0143.3	-8	0	+	0	0	.
chr2	229519648	229519649	chr2:229519649:C:A	rs11695055	C	A	C	Sox2_MA0143.3	7	1	+	9.206767037375712	3.5547341015215945	CCTTTGTC
chr2	229597667	229597668	chr2:229597668:A:G	rs2075256	A	G	A	Sox2_MA0143.3	17	0	+	0	0	.
chr2	229597677	229597678	chr2:229597678:G:C	rs2075257	G	C	G	Sox2_MA0143.3	27	0	+	0	0	.
chr2	229714065	229714066	chr2:229714066:C:G	rs569288494	C	G	C	Sox2_MA0143.3	7	1	+	9.019595766176417	8.676919043985553	CCATTGTC
chr2	229982373	229982374	chr2:229982374:C:T	rs35392774	C	T	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr2	230219555	230219556	chr2:230219556:C:T	rs74733828	C	T	C	Sox2_MA0143.3	20	0	-	0	0	.
chr2	230219579	230219580	chr2:230219580:A:G	rs6756352	A	G	A	Sox2_MA0143.3	-4	0	-	0	0	.
chr2	230219585	230219586	chr2:230219586:G:A	rs11679983	G	A	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr2	230318605	230318606	chr2:230318606:G:A	rs720977	G	A	a	Sox2_MA0143.3	18	0	-	0	0	.
chr2	230356376	230356377	chr2:230356377:C:G	rs4972948	C	G	C	Sox2_MA0143.3	21	0	-	0	0	.
chr2	230405993	230405994	chr2:230405994:G:A	rs78067315	G	A	G	Sox2_MA0143.3	1	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr2	230563099	230563100	chr2:230563100:T:C	rs60947998	T	C	.	Sox2_MA0143.3	-15	0	-	0	0	.
chr2	230582135	230582136	chr2:230582136:C:T	rs10167135	C	T	.	Sox2_MA0143.3	15	0	+	0	0	.
chr2	230582873	230582874	chr2:230582874:C:G	rs11676418	C	G	.	Sox2_MA0143.3	5	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr2	230582888	230582889	chr2:230582889:T:C	rs11682332	T	C	.	Sox2_MA0143.3	-10	0	-	0	0	.
chr2	230593877	230593878	chr2:230593878:T:C	rs11691353	T	C	C	Sox2_MA0143.3	11	0	+	0	0	.
chr2	230601095	230601096	chr2:230601096:T:C	rs1173175	T	C	C	Sox2_MA0143.3	2	1	-	8.676919043985553	2.5582713367092715	CCATTGTG
chr2	230628709	230628710	chr2:230628710:C:T	rs11885648	C	T	T	Sox2_MA0143.3	-18	0	-	0	0	.
chr2	230665005	230665006	chr2:230665006:C:T	rs562044971	C	T	C	Sox2_MA0143.3	16	0	+	0	0	.
chr2	230665006	230665007	chr2:230665007:G:A	rs114350822	G	A	g	Sox2_MA0143.3	17	0	+	0	0	.
chr2	230675875	230675876	chr2:230675876:C:T	rs10193165	C	T	C	Sox2_MA0143.3	12	0	+	0	0	.
chr2	230778855	230778856	chr2:230778856:T:C	chr2:230778856:T:C	T	C	T	Sox2_MA0143.3	-5	0	-	0	0	.
chr2	230788663	230788664	chr2:230788664:T:C	rs62193640	T	C	T	Sox2_MA0143.3	22	0	+	0	0	.
chr2	230794452	230794453	chr2:230794453:T:C	rs62193643	T	C	T	Sox2_MA0143.3	23	0	+	0	0	.
chr2	230794679	230794680	chr2:230794680:C:T	rs75224085	C	T	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr2	230794718	230794719	chr2:230794719:G:T	rs57329393	G	T	G	Sox2_MA0143.3	21	0	+	0	0	.
chr2	230796875	230796876	chr2:230796876:G:A	rs62193646	G	A	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr2	230849799	230849800	chr2:230849800:T:C	rs6735423	T	C	C	Sox2_MA0143.3	11	0	-	0	0	.
chr2	230905675	230905676	chr2:230905676:C:A	rs756838839	C	A	C	Sox2_MA0143.3	-5	0	-	0	0	.
chr2	230906351	230906352	chr2:230906352:A:T	rs79966088	A	T	A	Sox2_MA0143.3	19	0	+	0	0	.
chr2	230932124	230932125	chr2:230932125:C:T	rs192044570	C	T	C	Sox2_MA0143.3	23	0	-	0	0	.
chr2	230941947	230941948	chr2:230941948:T:C	rs141980940	T	C	T	Sox2_MA0143.3	2	1	+	9.800647049772198	3.494828071296623	CCTTTGTT
chr2	230945534	230945535	chr2:230945535:T:C	rs149090539	T	C	T	Sox2_MA0143.3	-14	0	-	0	0	.
chr2	230948020	230948021	chr2:230948021:C:G	rs996562481	C	G	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr2	231179939	231179940	chr2:231179940:G:A	rs6724181	G	A	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr2	231179969	231179970	chr2:231179970:A:C	rs6755467	A	C	C	Sox2_MA0143.3	10	0	+	0	0	.
chr2	231212667	231212668	chr2:231212668:G:T	rs17440635	G	T	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr2	231270300	231270301	chr2:231270301:G:C	rs75445705	G	C	G	Sox2_MA0143.3	7	1	+	8.864090315184848	9.206767037375712	CCTTTGTG
chr2	231314943	231314944	chr2:231314944:A:G	rs6714129	A	G	g	Sox2_MA0143.3	-3	0	+	0	0	.
chr2	231409937	231409938	chr2:231409938:A:G	rs62198976	A	G	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr2	231425960	231425961	chr2:231425961:G:C	rs12614600	G	C	C	Sox2_MA0143.3	7	1	+	8.864090315184848	9.206767037375712	CCTTTGTG
chr2	231426608	231426609	chr2:231426609:A:G	rs4973396	A	G	A	Sox2_MA0143.3	17	0	+	0	0	.
chr2	231436236	231436237	chr2:231436237:G:T	rs12995240	G	T	G	Sox2_MA0143.3	0	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr2	231436958	231436959	chr2:231436959:G:A	rs7563453	G	A	A	Sox2_MA0143.3	14	0	-	0	0	.
chr2	231480420	231480421	chr2:231480421:C:A	rs72989536	C	A	C	Sox2_MA0143.3	13	0	+	0	0	.
chr2	231482122	231482123	chr2:231482123:C:T	rs72989538	C	T	C	Sox2_MA0143.3	7	1	-	8.864090315184848	3.5547341015215945	CCTTTGTG
chr2	231513519	231513520	chr2:231513520:T:C	rs6750795	T	C	T	Sox2_MA0143.3	-20	0	+	0	0	.
chr2	231514080	231514081	chr2:231514081:C:T	rs28685161	C	T	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr2	231521929	231521930	chr2:231521930:A:T	rs4973437	A	T	A	Sox2_MA0143.3	21	0	-	0	0	.
chr2	231572098	231572099	chr2:231572099:G:A	rs62199036	G	A	G	Sox2_MA0143.3	21	0	+	0	0	.
chr2	231638949	231638950	chr2:231638950:T:G	rs34398955	T	G	T	Sox2_MA0143.3	17	0	+	0	0	.
chr2	231662316	231662317	chr2:231662317:G:T	chr2:231662317:G:T	G	T	G	Sox2_MA0143.3	-14	0	+	0	0	.
chr2	231662323	231662324	chr2:231662324:C:T	rs541706361	C	T	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr2	231681227	231681228	chr2:231681228:C:G	rs770764153	C	G	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr2	231699137	231699138	chr2:231699138:C:T	rs35029218	C	T	C	Sox2_MA0143.3	1	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr2	231708415	231708416	chr2:231708416:C:A	rs1018412730	C	A	C	Sox2_MA0143.3	14	0	+	0	0	.
chr2	231714524	231714525	chr2:231714525:C:A	rs115293873	C	A	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr2	231714538	231714539	chr2:231714539:C:A	rs779725571	C	A	C	Sox2_MA0143.3	0	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr2	231803114	231803115	chr2:231803115:A:G	rs72998808	A	G	A	Sox2_MA0143.3	4	1	-	8.864090315184848	1.9553355358696274	CCTTTGTG
chr2	231914414	231914415	chr2:231914415:C:G	rs2580854	C	G	G	Sox2_MA0143.3	14	0	+	0	0	.
chr2	232073185	232073186	chr2:232073186:G:A	rs3116244	G	A	G	Sox2_MA0143.3	14	0	+	0	0	.
chr2	232229265	232229266	chr2:232229266:G:T	rs59245529	G	T	G	Sox2_MA0143.3	19	0	+	0	0	.
chr2	232259817	232259818	chr2:232259818:C:T	rs146508139	C	T	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr2	232311655	232311656	chr2:232311656:T:A	rs10933388	T	A	A	Sox2_MA0143.3	9	0	+	0	0	.
chr2	232316207	232316208	chr2:232316208:T:C	rs867120039	T	C	T	Sox2_MA0143.3	12	0	+	0	0	.
chr2	232318566	232318567	chr2:232318567:A:G	rs11678040	A	G	A	Sox2_MA0143.3	2	1	-	9.800647049772198	3.494828071296623	CCTTTGTT
chr2	232337833	232337834	chr2:232337834:C:T	rs3885848	C	T	T	Sox2_MA0143.3	7	1	+	9.206767037375712	9.800647049772198	CCTTTGTC
chr2	232362638	232362639	chr2:232362639:T:C	rs78131396	T	C	T	Sox2_MA0143.3	12	0	-	0	0	.
chr2	232370191	232370192	chr2:232370192:T:C	rs189960283	T	C	T	Sox2_MA0143.3	-12	0	+	0	0	.
chr2	232370197	232370198	chr2:232370198:C:T	rs2678533	C	T	c	Sox2_MA0143.3	-6	0	+	0	0	.
chr2	232370198	232370199	chr2:232370199:T:G	rs2678534	T	G	G	Sox2_MA0143.3	-5	0	+	0	0	.
chr2	232389341	232389342	chr2:232389342:C:T	rs73002000	C	T	C	Sox2_MA0143.3	11	0	+	0	0	.
chr2	232401910	232401911	chr2:232401911:G:A	rs763137317	G	A	G	Sox2_MA0143.3	-5	0	+	0	0	.
chr2	232457575	232457576	chr2:232457576:C:T	rs139371546	C	T	C	Sox2_MA0143.3	24	0	+	0	0	.
chr2	232557679	232557680	chr2:232557680:G:A	rs1190439	G	A	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr2	232563069	232563070	chr2:232563070:C:T	rs62191570	C	T	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr2	232563072	232563073	chr2:232563073:G:A	rs1656400	G	A	A	Sox2_MA0143.3	-5	0	+	0	0	.
chr2	232563092	232563093	chr2:232563093:C:T	rs1656399	C	T	T	Sox2_MA0143.3	15	0	+	0	0	.
chr2	232563871	232563872	chr2:232563872:G:A	rs1729252	G	A	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr2	232624664	232624665	chr2:232624665:G:C	rs75407123	G	C	G	Sox2_MA0143.3	22	0	-	0	0	.
chr2	232637953	232637954	chr2:232637954:A:G	rs77399214	A	G	A	Sox2_MA0143.3	27	0	+	0	0	.
chr2	232641588	232641589	chr2:232641589:G:A	rs6741190	G	A	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr2	232759052	232759053	chr2:232759053:C:A	rs1515961	C	A	A	Sox2_MA0143.3	-14	0	+	0	0	.
chr2	232872391	232872392	chr2:232872392:G:A	rs116953396	G	A	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr2	232878652	232878653	chr2:232878653:C:T	rs778370	C	T	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr2	232925764	232925765	chr2:232925765:A:G	rs2880986	A	G	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr2	232925771	232925772	chr2:232925772:C:G	rs11675082	C	G	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr2	232925811	232925812	chr2:232925812:T:A	rs2675952	T	A	A	Sox2_MA0143.3	27	0	+	0	0	.
chr2	232976280	232976281	chr2:232976281:T:C	rs938570	T	C	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr2	233048644	233048645	chr2:233048645:G:A	rs28574597	G	A	G	Sox2_MA0143.3	13	0	+	0	0	.
chr2	233080306	233080307	chr2:233080307:C:G	rs4246650	C	G	G	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr2	233133397	233133398	chr2:233133398:G:T	rs10933434	G	T	G	Sox2_MA0143.3	0	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr2	233139304	233139305	chr2:233139305:T:C	rs886975487	T	C	T	Sox2_MA0143.3	14	0	-	0	0	.
chr2	233151718	233151719	chr2:233151719:C:G	rs36171197	C	G	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr2	233153590	233153591	chr2:233153591:A:G	rs139326470	A	G	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr2	233290890	233290891	chr2:233290891:G:T	rs6431262	G	T	T	Sox2_MA0143.3	5	1	+	9.019595766176417	2.110840986861197	CCATTGTC
chr2	233326111	233326112	chr2:233326112:G:A	rs3792098	G	A	G	Sox2_MA0143.3	26	0	-	0	0	.
chr2	233473695	233473696	chr2:233473696:G:T	rs535838747	G	T	G	Sox2_MA0143.3	23	0	+	0	0	.
chr2	233515983	233515984	chr2:233515984:T:C	rs2602388	T	C	T	Sox2_MA0143.3	17	0	+	0	0	.
chr2	233711886	233711887	chr2:233711887:T:C	rs28898595	T	C	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr2	233796742	233796743	chr2:233796743:A:G	rs741160	A	G	A	Sox2_MA0143.3	-6	0	+	0	0	.
chr2	233832111	233832112	chr2:233832112:A:G	rs213547	A	G	G	Sox2_MA0143.3	-12	0	+	0	0	.
chr2	233832229	233832230	chr2:233832230:T:C	rs756291765	T	C	T	Sox2_MA0143.3	-5	0	-	0	0	.
chr2	233859326	233859327	chr2:233859327:C:T	rs7567475	C	T	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr2	233992689	233992690	chr2:233992690:G:A	rs28948672	G	A	G	Sox2_MA0143.3	17	0	-	0	0	.
chr2	234025541	234025542	chr2:234025542:A:G	rs663924	A	G	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr2	234102304	234102305	chr2:234102305:A:T	rs75743485	A	T	A	Sox2_MA0143.3	10	0	+	0	0	.
chr2	234135919	234135920	chr2:234135920:C:T	rs114387195	C	T	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr2	234137817	234137818	chr2:234137818:A:T	rs369267974	A	T	A	Sox2_MA0143.3	6	1	-	8.676919043985553	1.7681642646703326	CCATTGTG
chr2	234156790	234156791	chr2:234156791:G:T	chr2:234156791:G:T	G	T	G	Sox2_MA0143.3	9	0	-	0	0	.
chr2	234191872	234191873	chr2:234191873:T:C	rs62184335	T	C	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr2	234224267	234224268	chr2:234224268:T:C	rs1356660	T	C	T	Sox2_MA0143.3	-4	0	+	0	0	.
chr2	234233055	234233056	chr2:234233056:C:A	rs113461182	C	A	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr2	234250096	234250097	chr2:234250097:G:A	rs2176651	G	A	A	Sox2_MA0143.3	9	0	-	0	0	.
chr2	234285729	234285730	chr2:234285730:G:A	rs76990258	G	A	G	Sox2_MA0143.3	5	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr2	234287225	234287226	chr2:234287226:C:A	rs4663123	C	A	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr2	234287254	234287255	chr2:234287255:C:A	rs4663124	C	A	A	Sox2_MA0143.3	17	0	+	0	0	.
chr2	234287792	234287793	chr2:234287793:G:A	rs79502755	G	A	g	Sox2_MA0143.3	-5	0	-	0	0	.
chr2	234291270	234291271	chr2:234291271:T:C	rs78525864	T	C	T	Sox2_MA0143.3	10	0	-	0	0	.
chr2	234304981	234304982	chr2:234304982:C:T	rs6722693	C	T	C	Sox2_MA0143.3	18	0	-	0	0	.
chr2	234326821	234326822	chr2:234326822:T:C	rs6431253	T	C	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr2	234333316	234333317	chr2:234333317:G:A	rs772783	G	A	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr2	234333325	234333326	chr2:234333326:C:G	rs772782	C	G	C	Sox2_MA0143.3	1	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr2	234344143	234344144	chr2:234344144:T:C	rs1876716	T	C	C	Sox2_MA0143.3	25	0	+	0	0	.
chr2	234381267	234381268	chr2:234381268:C:T	rs111393546	C	T	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr2	234457729	234457730	chr2:234457730:A:G	rs150473769	A	G	A	Sox2_MA0143.3	-15	0	-	0	0	.
chr2	234459668	234459669	chr2:234459669:G:C	rs113939183	G	C	G	Sox2_MA0143.3	27	0	-	0	0	.
chr2	234459680	234459681	chr2:234459681:G:A	rs7595565	G	A	G	Sox2_MA0143.3	15	0	-	0	0	.
chr2	234497273	234497274	chr2:234497274:G:T	rs191784069	G	T	G	Sox2_MA0143.3	14	0	-	0	0	.
chr2	234497292	234497293	chr2:234497293:G:T	rs556291717	G	T	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr2	234544100	234544101	chr2:234544101:G:A	rs72977513	G	A	A	Sox2_MA0143.3	7	1	-	9.206767037375712	9.800647049772198	CCTTTGTC
chr2	234572306	234572307	chr2:234572307:T:C	rs72979564	T	C	T	Sox2_MA0143.3	-6	0	-	0	0	.
chr2	234607242	234607243	chr2:234607243:T:A	rs10929043	T	A	A	Sox2_MA0143.3	6	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr2	234608434	234608435	chr2:234608435:A:C	rs1917946	A	C	C	Sox2_MA0143.3	11	0	-	0	0	.
chr2	234609096	234609097	chr2:234609097:A:G	rs868062	A	G	A	Sox2_MA0143.3	9	0	+	0	0	.
chr2	234785918	234785919	chr2:234785919:C:T	rs6739330	C	T	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr2	234788905	234788906	chr2:234788906:G:A	rs12994606	G	A	G	Sox2_MA0143.3	-3	0	-	0	0	.
chr2	234913202	234913203	chr2:234913203:A:G	rs76249264	A	G	a	Sox2_MA0143.3	22	0	+	0	0	.
chr2	234932671	234932672	chr2:234932672:G:A	rs77994513	G	A	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr2	234960916	234960917	chr2:234960917:A:G	rs10168235	A	G	G	Sox2_MA0143.3	8	0	+	0	0	.
chr2	234970292	234970293	chr2:234970293:C:A	rs13032747	C	A	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr2	235053147	235053148	chr2:235053148:G:A	rs112644556	G	A	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr2	235078518	235078519	chr2:235078519:G:T	rs56379740	G	T	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr2	235141459	235141460	chr2:235141460:T:C	rs62187475	T	C	T	Sox2_MA0143.3	2	1	-	9.019595766176417	2.900948058900136	CCATTGTC
chr2	235158841	235158842	chr2:235158842:C:T	rs3924659	C	T	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr2	235160422	235160423	chr2:235160423:G:A	rs7590732	G	A	A	Sox2_MA0143.3	20	0	+	0	0	.
chr2	235160423	235160424	chr2:235160424:A:G	rs7578742	A	G	A	Sox2_MA0143.3	21	0	+	0	0	.
chr2	235194479	235194480	chr2:235194480:A:G	rs1864716	A	G	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr2	235238703	235238704	chr2:235238704:C:G	rs143496444	C	G	C	Sox2_MA0143.3	13	0	+	0	0	.
chr2	235263437	235263438	chr2:235263438:C:A	rs9973558	C	A	C	Sox2_MA0143.3	17	0	-	0	0	.
chr2	235271440	235271441	chr2:235271441:T:C	rs11902474	T	C	C	Sox2_MA0143.3	14	0	+	0	0	.
chr2	235299422	235299423	chr2:235299423:C:T	rs11691751	C	T	T	Sox2_MA0143.3	-17	0	-	0	0	.
chr2	235483563	235483564	chr2:235483564:A:C	rs6431377	A	C	C	Sox2_MA0143.3	-20	0	-	0	0	.
chr2	235507600	235507601	chr2:235507601:G:A	rs885539	G	A	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr2	235520437	235520438	chr2:235520438:C:T	rs4663603	C	T	T	Sox2_MA0143.3	-9	0	+	0	0	.
chr2	235597968	235597969	chr2:235597969:C:T	rs73122409	C	T	-	Sox2_MA0143.3	13	0	+	0	0	.
chr2	235666705	235666706	chr2:235666706:A:G	rs10929144	A	G	G	Sox2_MA0143.3	7	1	-	9.800647049772198	9.206767037375712	CCTTTGTT
chr2	235807598	235807599	chr2:235807599:A:G	rs556380041	A	G	A	Sox2_MA0143.3	-6	0	+	0	0	.
chr2	235844136	235844137	chr2:235844137:A:C	rs78756147	A	C	A	Sox2_MA0143.3	18	0	+	0	0	.
chr2	235901114	235901115	chr2:235901115:A:G	rs12328959	A	G	A	Sox2_MA0143.3	-10	0	+	0	0	.
chr2	235917142	235917143	chr2:235917143:T:A	rs12986802	T	A	A	Sox2_MA0143.3	15	0	+	0	0	.
chr2	235917736	235917737	chr2:235917737:G:T	rs992208379	G	T	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr2	235983690	235983691	chr2:235983691:A:G	rs35149945	A	G	A	Sox2_MA0143.3	2	1	+	8.676919043985553	2.5582713367092715	CCATTGTG
chr2	236011219	236011220	chr2:236011220:G:C	rs13394046	G	C	G	Sox2_MA0143.3	5	1	+	8.676919043985553	1.7681642646703324	CCATTGTG
chr2	236085346	236085347	chr2:236085347:A:G	chr2:236085347:A:G	A	G	A	Sox2_MA0143.3	-8	0	+	0	0	.
chr2	236085351	236085352	chr2:236085352:C:T	rs3768935	C	T	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr2	236090161	236090162	chr2:236090162:T:A	chr2:236090162:T:A	T	A	T	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr2	236164582	236164583	chr2:236164583:C:G	rs925993030	C	G	C	Sox2_MA0143.3	0	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr2	236164605	236164606	chr2:236164606:G:A	rs75119007	G	A	G	Sox2_MA0143.3	23	0	+	0	0	.
chr2	236176819	236176820	chr2:236176820:T:A	rs6719343	T	A	A	Sox2_MA0143.3	27	0	+	0	0	.
chr2	236179992	236179993	chr2:236179993:A:T	rs563010171	A	T	A	Sox2_MA0143.3	3	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr2	236211460	236211461	chr2:236211461:T:C	rs1000688964	T	C	T	Sox2_MA0143.3	27	0	+	0	0	.
chr2	236488900	236488901	chr2:236488901:T:C	rs60508202	T	C	T	Sox2_MA0143.3	-13	0	-	0	0	.
chr2	236551666	236551667	chr2:236551667:A:C	rs7579691	A	C	A	Sox2_MA0143.3	-13	0	-	0	0	.
chr2	236612912	236612913	chr2:236612913:G:A	rs78286890	G	A	G	Sox2_MA0143.3	11	0	-	0	0	.
chr2	236626418	236626419	chr2:236626419:C:T	rs74571727	C	T	C	Sox2_MA0143.3	18	0	-	0	0	.
chr2	236660247	236660248	chr2:236660248:T:G	rs147989932	T	G	T	Sox2_MA0143.3	-3	0	+	0	0	.
chr2	236664394	236664395	chr2:236664395:A:G	rs2720134	A	G	A	Sox2_MA0143.3	4	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr2	236670144	236670145	chr2:236670145:A:G	rs115845973	A	G	A	Sox2_MA0143.3	17	0	-	0	0	.
chr2	236693878	236693879	chr2:236693879:T:C	rs2600772	T	C	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr2	236704204	236704205	chr2:236704205:G:A	rs2720157	G	A	G	Sox2_MA0143.3	14	0	-	0	0	.
chr2	236729157	236729158	chr2:236729158:G:A	rs117634443	G	A	g	Sox2_MA0143.3	18	0	+	0	0	.
chr2	236735927	236735928	chr2:236735928:T:C	rs10183167	T	C	C	Sox2_MA0143.3	15	0	+	0	0	.
chr2	236769408	236769409	chr2:236769409:T:C	rs719649	T	C	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr2	236772742	236772743	chr2:236772743:T:C	rs60060546	T	C	T	Sox2_MA0143.3	4	1	+	9.206767037375712	2.2980122580604916	CCTTTGTC
chr2	236777360	236777361	chr2:236777361:A:C	rs72975189	A	C	A	Sox2_MA0143.3	-1	0	-	0	0	.
chr2	236899045	236899046	chr2:236899046:T:C	rs11678932	T	C	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr2	236928604	236928605	chr2:236928605:C:T	rs62185272	C	T	C	Sox2_MA0143.3	18	0	+	0	0	.
chr2	236933535	236933536	chr2:236933536:C:T	rs113049439	C	T	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr2	236966031	236966032	chr2:236966032:G:A	rs55900692	G	A	G	Sox2_MA0143.3	12	0	+	0	0	.
chr2	236981614	236981615	chr2:236981615:C:G	rs1814419	C	G	G	Sox2_MA0143.3	10	0	+	0	0	.
chr2	237035995	237035996	chr2:237035996:T:C	rs13399005	T	C	T	Sox2_MA0143.3	-13	0	+	0	0	.
chr2	237044378	237044379	chr2:237044379:A:G	rs74420568	A	G	A	Sox2_MA0143.3	-16	0	-	0	0	.
chr2	237148629	237148630	chr2:237148630:T:C	rs10202006	T	C	T	Sox2_MA0143.3	2	1	+	8.864090315184848	2.5582713367092715	CCTTTGTG
chr2	237208673	237208674	chr2:237208674:T:C	rs62184783	T	C	C	Sox2_MA0143.3	6	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr2	237208692	237208693	chr2:237208693:C:T	rs73089850	C	T	C	Sox2_MA0143.3	25	0	+	0	0	.
chr2	237296839	237296840	chr2:237296840:C:T	rs6752876	C	T	C	Sox2_MA0143.3	9	0	-	0	0	.
chr2	237341858	237341859	chr2:237341859:C:T	rs55635726	C	T	C	Sox2_MA0143.3	27	0	+	0	0	.
chr2	237359073	237359074	chr2:237359074:C:T	rs2646254	C	T	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr2	237451049	237451050	chr2:237451050:T:C	rs143211708	T	C	T	Sox2_MA0143.3	-16	0	+	0	0	.
chr2	237489538	237489539	chr2:237489539:G:A	rs6713555	G	A	G	Sox2_MA0143.3	27	0	-	0	0	.
chr2	237489733	237489734	chr2:237489734:C:T	rs776016242	C	T	C	Sox2_MA0143.3	9	0	+	0	0	.
chr2	237541380	237541381	chr2:237541381:G:C	rs114258947	G	C	G	Sox2_MA0143.3	10	0	-	0	0	.
chr2	237549890	237549891	chr2:237549891:A:T	rs7608561	A	T	a	Sox2_MA0143.3	11	0	+	0	0	.
chr2	237578123	237578124	chr2:237578124:A:G	rs11542159	A	G	G	Sox2_MA0143.3	-14	0	+	0	0	.
chr2	237580062	237580063	chr2:237580063:G:A	rs79389721	G	A	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr2	237614048	237614049	chr2:237614049:A:G	rs4273179	A	G	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr2	237614496	237614497	chr2:237614497:C:T	rs78291483	C	T	C	Sox2_MA0143.3	13	0	+	0	0	.
chr2	237647451	237647452	chr2:237647452:A:G	rs7596620	A	G	A	Sox2_MA0143.3	24	0	+	0	0	.
chr2	237700354	237700355	chr2:237700355:T:C	rs77147178	T	C	T	Sox2_MA0143.3	2	1	+	8.864090315184848	2.5582713367092715	CCTTTGTG
chr2	237733297	237733298	chr2:237733298:C:T	chr2:237733298:C:T	C	T	C	Sox2_MA0143.3	0	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr2	237733319	237733320	chr2:237733320:G:A	rs3754721	G	A	A	Sox2_MA0143.3	22	0	+	0	0	.
chr2	237739500	237739501	chr2:237739501:C:G	rs3769072	C	G	G	Sox2_MA0143.3	16	0	-	0	0	.
chr2	237742341	237742342	chr2:237742342:C:T	rs76819298	C	T	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr2	237742342	237742343	chr2:237742343:G:A	rs11693524	G	A	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr2	237751419	237751420	chr2:237751420:A:G	rs77180638	A	G	A	Sox2_MA0143.3	-14	0	-	0	0	.
chr2	237775324	237775325	chr2:237775325:C:G	rs10176913	C	G	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr2	237874018	237874019	chr2:237874019:G:A	rs538972046	G	A	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr2	237882155	237882156	chr2:237882156:C:T	rs73092517	C	T	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr2	237883360	237883361	chr2:237883361:A:G	rs11898345	A	G	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr2	237889109	237889110	chr2:237889110:C:G	rs139226678	C	G	C	Sox2_MA0143.3	10	0	+	0	0	.
chr2	237894835	237894836	chr2:237894836:A:G	rs11675972	A	G	G	Sox2_MA0143.3	3	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr2	238033263	238033264	chr2:238033264:A:G	rs4663279	A	G	A	Sox2_MA0143.3	-14	0	-	0	0	.
chr2	238090721	238090722	chr2:238090722:G:C	rs114733728	G	C	G	Sox2_MA0143.3	-11	0	+	0	0	.
chr2	238121047	238121048	chr2:238121048:G:T	rs112014260	G	T	G	Sox2_MA0143.3	7	1	+	8.864090315184848	9.800647049772198	CCTTTGTG
chr2	238157705	238157706	chr2:238157706:G:A	rs77169642	G	A	G	Sox2_MA0143.3	7	1	-	9.206767037375712	9.800647049772198	CCTTTGTC
chr2	238175462	238175463	chr2:238175463:C:A	rs13001876	C	A	C	Sox2_MA0143.3	5	1	-	8.676919043985553	1.7681642646703324	CCATTGTG
chr2	238175477	238175478	chr2:238175478:C:T	rs6726348	C	T	T	Sox2_MA0143.3	-10	0	-	0	0	.
chr2	238241003	238241004	chr2:238241004:C:G	rs1374385	C	G	G	Sox2_MA0143.3	0	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr2	238243084	238243085	chr2:238243085:G:A	rs1665281	G	A	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr2	238290403	238290404	chr2:238290404:A:C	rs111934460	A	C	A	Sox2_MA0143.3	-4	0	+	0	0	.
chr2	238294726	238294727	chr2:238294727:T:C	rs4459687	T	C	C	Sox2_MA0143.3	27	0	+	0	0	.
chr2	238340407	238340408	chr2:238340408:G:A	rs61221372	G	A	G	Sox2_MA0143.3	22	0	+	0	0	.
chr2	238350696	238350697	chr2:238350697:C:T	rs6706967	C	T	T	Sox2_MA0143.3	-16	0	-	0	0	.
chr2	238361561	238361562	chr2:238361562:A:G	rs4663883	A	G	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr2	238419877	238419878	chr2:238419878:G:T	rs484968	G	T	T	Sox2_MA0143.3	26	0	+	0	0	.
chr2	238487616	238487617	chr2:238487617:A:C	rs78386137	A	C	A	Sox2_MA0143.3	-17	0	-	0	0	.
chr2	238500431	238500432	chr2:238500432:C:T	rs115561054	C	T	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr2	238504530	238504531	chr2:238504531:T:C	rs12692222	T	C	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr2	238514309	238514310	chr2:238514310:C:A	rs303039	C	A	c	Sox2_MA0143.3	-20	0	+	0	0	.
chr2	238514351	238514352	chr2:238514352:T:C	rs72994950	T	C	t	Sox2_MA0143.3	22	0	+	0	0	.
chr2	238529273	238529274	chr2:238529274:G:A	rs145224375	G	A	G	Sox2_MA0143.3	14	0	+	0	0	.
chr2	238529284	238529285	chr2:238529285:C:T	rs56373856	C	T	T	Sox2_MA0143.3	25	0	+	0	0	.
chr2	238593383	238593384	chr2:238593384:C:T	rs4663927	C	T	C	Sox2_MA0143.3	15	0	+	0	0	.
chr2	238594126	238594127	chr2:238594127:G:A	rs6431607	G	A	A	Sox2_MA0143.3	-1	0	+	0	0	.
chr2	238627390	238627391	chr2:238627391:C:A	rs79573534	C	A	A	Sox2_MA0143.3	0	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr2	238645034	238645035	chr2:238645035:G:A	rs12616199	G	A	G	Sox2_MA0143.3	14	0	-	0	0	.
chr2	238652555	238652556	chr2:238652556:T:G	rs62189886	T	G	T	Sox2_MA0143.3	-19	0	-	0	0	.
chr2	238657784	238657785	chr2:238657785:T:C	rs907111	T	C	T	Sox2_MA0143.3	6	1	+	9.019595766176417	2.110840986861197	CCATTGTC
chr2	238659512	238659513	chr2:238659513:A:C	rs1810139	A	C	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr2	238659521	238659522	chr2:238659522:T:C	rs1810140	T	C	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr2	238692126	238692127	chr2:238692127:A:G	rs78516801	A	G	A	Sox2_MA0143.3	14	0	-	0	0	.
chr2	238787614	238787615	chr2:238787615:A:G	rs182401844	A	G	A	Sox2_MA0143.3	3	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr2	238869388	238869389	chr2:238869389:C:T	rs151001562	C	T	C	Sox2_MA0143.3	9	0	+	0	0	.
chr2	238873005	238873006	chr2:238873006:G:A	rs141407058	G	A	G	Sox2_MA0143.3	7	1	-	9.019595766176417	9.613475778572903	CCATTGTC
chr2	238893746	238893747	chr2:238893747:T:A	rs1004589866	T	A	T	Sox2_MA0143.3	14	0	+	0	0	.
chr2	238920886	238920887	chr2:238920887:G:C	rs76904661	G	C	G	Sox2_MA0143.3	27	0	-	0	0	.
chr2	238920931	238920932	chr2:238920932:G:C	rs112153005	G	C	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr2	238925957	238925958	chr2:238925958:C:T	rs183137933	C	T	C	Sox2_MA0143.3	21	0	+	0	0	.
chr2	238938165	238938166	chr2:238938166:C:T	rs66988254	C	T	C	Sox2_MA0143.3	24	0	-	0	0	.
chr2	238940686	238940687	chr2:238940687:G:A	rs6740945	G	A	g	Sox2_MA0143.3	-18	0	-	0	0	.
chr2	238941804	238941805	chr2:238941805:G:C	rs115138436	G	C	G	Sox2_MA0143.3	9	0	-	0	0	.
chr2	238941805	238941806	chr2:238941806:G:A	rs61184912	G	A	G	Sox2_MA0143.3	8	0	-	0	0	.
chr2	238968258	238968259	chr2:238968259:T:C	rs4241230	T	C	T	Sox2_MA0143.3	10	0	-	0	0	.
chr2	238973940	238973941	chr2:238973941:C:T	rs4591363	C	T	T	Sox2_MA0143.3	11	0	-	0	0	.
chr2	238974301	238974302	chr2:238974302:T:G	chr2:238974302:T:G	T	G	T	Sox2_MA0143.3	7	1	-	3.5547341015215945	9.206767037375712	CCTTTGTA
chr2	238995985	238995986	chr2:238995986:C:T	rs10174345	C	T	T	Sox2_MA0143.3	-12	0	-	0	0	.
chr2	239021555	239021556	chr2:239021556:C:T	rs113452364	C	T	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr2	239085346	239085347	chr2:239085347:A:T	rs12233096	A	T	T	Sox2_MA0143.3	-4	0	+	0	0	.
chr2	239097099	239097100	chr2:239097100:C:T	rs77969718	C	T	C	Sox2_MA0143.3	16	0	-	0	0	.
chr2	239097127	239097128	chr2:239097128:G:A	rs986025256	G	A	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr2	239099591	239099592	chr2:239099592:T:C	rs3791396	T	C	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr2	239127657	239127658	chr2:239127658:G:T	chr2:239127658:G:T	G	T	G	Sox2_MA0143.3	1	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr2	239182258	239182259	chr2:239182259:C:T	rs3791542	C	T	C	Sox2_MA0143.3	24	0	+	0	0	.
chr2	239205379	239205380	chr2:239205380:G:T	rs528213	G	T	G	Sox2_MA0143.3	1	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr2	239230715	239230716	chr2:239230716:A:G	rs765958083	A	G	A	Sox2_MA0143.3	-11	0	-	0	0	.
chr2	239245343	239245344	chr2:239245344:C:T	rs13391448	C	T	C	Sox2_MA0143.3	-12	0	-	0	0	.
chr2	239265630	239265631	chr2:239265631:G:C	rs10195501	G	C	G	Sox2_MA0143.3	-16	0	-	0	0	.
chr2	239283799	239283800	chr2:239283800:C:G	rs62182100	C	G	C	Sox2_MA0143.3	5	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr2	239291903	239291904	chr2:239291904:G:T	rs114926264	G	T	G	Sox2_MA0143.3	9	0	+	0	0	.
chr2	239317252	239317253	chr2:239317253:G:C	chr2:239317253:G:C	G	C	G	Sox2_MA0143.3	-12	0	+	0	0	.
chr2	239326434	239326435	chr2:239326435:G:C	rs74604604	G	C	G	Sox2_MA0143.3	23	0	-	0	0	.
chr2	239371106	239371107	chr2:239371107:T:C	rs62182155	T	C	T	Sox2_MA0143.3	-4	0	+	0	0	.
chr2	239377520	239377521	chr2:239377521:A:G	rs13026316	A	G	A	Sox2_MA0143.3	17	0	-	0	0	.
chr2	239393418	239393419	chr2:239393419:T:C	rs78015172	T	C	T	Sox2_MA0143.3	-1	0	+	0	0	.
chr2	239400648	239400649	chr2:239400649:G:A	rs1046514202	G	A	g	Sox2_MA0143.3	11	0	-	0	0	.
chr2	239401580	239401581	chr2:239401581:C:T	rs1709852	C	T	C	Sox2_MA0143.3	7	1	-	8.676919043985553	3.3675628303222993	CCATTGTG
chr2	239401596	239401597	chr2:239401597:C:G	rs73106726	C	G	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr2	239452749	239452750	chr2:239452750:C:G	rs11889278	C	G	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr2	239496186	239496187	chr2:239496187:C:T	rs6751525	C	T	T	Sox2_MA0143.3	-20	0	-	0	0	.
chr2	239500363	239500364	chr2:239500364:C:T	rs915490726	C	T	C	Sox2_MA0143.3	0	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr2	239522136	239522137	chr2:239522137:C:T	rs11677786	C	T	C	Sox2_MA0143.3	-20	0	-	0	0	.
chr2	239522358	239522359	chr2:239522359:G:T	rs6706785	G	T	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr2	239551359	239551360	chr2:239551360:C:G	rs1684272	C	G	T	Sox2_MA0143.3	17	0	-	0	0	.
chr2	239575470	239575471	chr2:239575471:G:C	rs6757246	G	C	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr2	239575493	239575494	chr2:239575494:C:G	rs77783689	C	G	C	Sox2_MA0143.3	7	1	+	9.019595766176417	8.676919043985553	CCATTGTC
chr2	239601558	239601559	chr2:239601559:C:T	rs7600600	C	T	T	Sox2_MA0143.3	-10	0	+	0	0	.
chr2	239609186	239609187	chr2:239609187:G:T	rs4852097	G	T	T	Sox2_MA0143.3	-13	0	+	0	0	.
chr2	239612129	239612130	chr2:239612130:T:C	rs1437734	T	C	C	Sox2_MA0143.3	27	0	-	0	0	.
chr2	239612172	239612173	chr2:239612173:A:G	rs186739958	A	G	A	Sox2_MA0143.3	-16	0	-	0	0	.
chr2	239624642	239624643	chr2:239624643:T:A	rs10189314	T	A	T	Sox2_MA0143.3	-9	0	+	0	0	.
chr2	239627405	239627406	chr2:239627406:A:G	rs10221832	A	G	A	Sox2_MA0143.3	18	0	+	0	0	.
chr2	239630255	239630256	chr2:239630256:G:T	rs545117382	G	T	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr2	239685686	239685687	chr2:239685687:G:A	rs55774589	G	A	G	Sox2_MA0143.3	10	0	+	0	0	.
chr2	239699720	239699721	chr2:239699721:A:G	rs111306905	A	G	A	Sox2_MA0143.3	16	0	-	0	0	.
chr2	239699739	239699740	chr2:239699740:G:A	rs2164804	G	A	G	Sox2_MA0143.3	-3	0	-	0	0	.
chr2	239711380	239711381	chr2:239711381:T:C	rs7426027	T	C	t	Sox2_MA0143.3	9	0	+	0	0	.
chr2	239711416	239711417	chr2:239711417:C:A	rs10201805	C	A	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr2	239734960	239734961	chr2:239734961:G:A	rs901688193	G	A	G	Sox2_MA0143.3	10	0	+	0	0	.
chr2	239762365	239762366	chr2:239762366:T:C	rs6743754	T	C	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr2	239762924	239762925	chr2:239762925:G:A	rs6543576	G	A	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr2	239768763	239768764	chr2:239768764:G:A	rs6543579	G	A	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr2	239773863	239773864	chr2:239773864:G:A	rs73008287	G	A	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr2	239775914	239775915	chr2:239775915:G:T	rs74654345	G	T	G	Sox2_MA0143.3	17	0	-	0	0	.
chr2	239782290	239782291	chr2:239782291:C:T	rs7566489	C	T	-	Sox2_MA0143.3	-8	0	+	0	0	.
chr2	239806734	239806735	chr2:239806735:G:A	rs113409086	G	A	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr2	239814479	239814480	chr2:239814480:T:C	rs13000485	T	C	C	Sox2_MA0143.3	22	0	-	0	0	.
chr2	239817530	239817531	chr2:239817531:T:C	rs4852139	T	C	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr2	239831231	239831232	chr2:239831232:A:G	rs188286271	A	G	A	Sox2_MA0143.3	2	1	+	9.613475778572903	3.494828071296623	CCATTGTT
chr2	239847208	239847209	chr2:239847209:C:T	chr2:239847209:C:T	C	T	C	Sox2_MA0143.3	12	0	-	0	0	.
chr2	239933379	239933380	chr2:239933380:A:G	rs11890367	A	G	a	Sox2_MA0143.3	24	0	-	0	0	.
chr2	239939363	239939364	chr2:239939364:G:A	rs79230834	G	A	G	Sox2_MA0143.3	23	0	-	0	0	.
chr2	239948286	239948287	chr2:239948287:C:T	rs78437465	C	T	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr2	239979227	239979228	chr2:239979228:C:G	rs77126660	C	G	C	Sox2_MA0143.3	13	0	+	0	0	.
chr2	240001946	240001947	chr2:240001947:C:T	rs2369088	C	T	T	Sox2_MA0143.3	-5	0	+	0	0	.
chr2	240109730	240109731	chr2:240109731:A:G	rs4854029	A	G	G	Sox2_MA0143.3	22	0	+	0	0	.
chr2	240127841	240127842	chr2:240127842:C:T	rs2887263	C	T	T	Sox2_MA0143.3	-15	0	-	0	0	.
chr2	240130019	240130020	chr2:240130020:C:G	rs115716357	C	G	C	Sox2_MA0143.3	25	0	-	0	0	.
chr2	240155184	240155185	chr2:240155185:T:C	rs903757	T	C	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr2	240179355	240179356	chr2:240179356:A:G	rs62184671	A	G	G	Sox2_MA0143.3	9	0	+	0	0	.
chr2	240184185	240184186	chr2:240184186:C:T	rs7597331	C	T	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr2	240192028	240192029	chr2:240192029:T:C	rs35605021	T	C	T	Sox2_MA0143.3	-19	0	-	0	0	.
chr2	240194619	240194620	chr2:240194620:A:G	rs67949567	A	G	G	Sox2_MA0143.3	20	0	+	0	0	.
chr2	240203745	240203746	chr2:240203746:T:C	rs187421886	T	C	T	Sox2_MA0143.3	9	0	+	0	0	.
chr2	240223318	240223319	chr2:240223319:A:G	rs7598043	A	G	A	Sox2_MA0143.3	2	1	+	8.676919043985553	2.5582713367092715	CCATTGTG
chr2	240228495	240228496	chr2:240228496:A:G	rs7420256	A	G	A	Sox2_MA0143.3	26	0	-	0	0	.
chr2	240263107	240263108	chr2:240263108:G:A	rs112015072	G	A	G	Sox2_MA0143.3	-2	0	+	0	0	.
chr2	240280956	240280957	chr2:240280957:A:G	rs4854023	A	G	A	Sox2_MA0143.3	-7	0	-	0	0	.
chr2	240392789	240392790	chr2:240392790:A:C	rs1318523	A	C	A	Sox2_MA0143.3	-4	0	+	0	0	.
chr2	240497860	240497861	chr2:240497861:G:A	rs73104100	G	A	A	Sox2_MA0143.3	-12	0	-	0	0	.
chr2	240523940	240523941	chr2:240523941:C:A	rs36085481	C	A	C	Sox2_MA0143.3	23	0	+	0	0	.
chr2	240540091	240540092	chr2:240540092:C:G	rs114070862	C	G	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr2	240552027	240552028	chr2:240552028:G:A	rs6724224	G	A	A	Sox2_MA0143.3	12	0	+	0	0	.
chr2	240561549	240561550	chr2:240561550:T:C	rs77298443	T	C	T	Sox2_MA0143.3	-11	0	+	0	0	.
chr2	240570294	240570295	chr2:240570295:C:T	rs6730107	C	T	C	Sox2_MA0143.3	14	0	+	0	0	.
chr2	240601673	240601674	chr2:240601674:G:A	rs3749168	G	A	A	Sox2_MA0143.3	-13	0	+	0	0	.
chr2	240601711	240601712	chr2:240601712:A:T	rs73003705	A	T	A	Sox2_MA0143.3	25	0	+	0	0	.
chr2	240796434	240796435	chr2:240796435:G:T	rs553265326	G	T	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr2	240863682	240863683	chr2:240863683:A:G	rs11686679	A	G	A	Sox2_MA0143.3	-20	0	-	0	0	.
chr2	240869945	240869946	chr2:240869946:C:T	rs78377431	C	T	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr2	240972598	240972599	chr2:240972599:T:C	rs11898539	T	C	T	Sox2_MA0143.3	-18	0	+	0	0	.
chr2	240975591	240975592	chr2:240975592:C:T	rs55951434	C	T	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr2	241010127	241010128	chr2:241010128:G:A	rs75855935	G	A	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr2	241010149	241010150	chr2:241010150:G:A	rs539082199	G	A	G	Sox2_MA0143.3	15	0	+	0	0	.
chr2	241019367	241019368	chr2:241019368:A:G	chr2:241019368:A:G	A	G	A	Sox2_MA0143.3	-8	0	-	0	0	.
chr2	241032410	241032411	chr2:241032411:A:G	rs2058061	A	G	G	Sox2_MA0143.3	2	1	+	9.613475778572903	3.494828071296623	CCATTGTT
chr2	241082326	241082327	chr2:241082327:G:T	rs2108485	G	T	T	Sox2_MA0143.3	0	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr2	241088990	241088991	chr2:241088991:G:A	rs62187373	G	A	A	Sox2_MA0143.3	-20	0	+	0	0	.
chr2	241112143	241112144	chr2:241112144:G:A	rs16843288	G	A	G	Sox2_MA0143.3	9	0	-	0	0	.
chr2	241142362	241142363	chr2:241142363:T:A	rs2074829	T	A	A	Sox2_MA0143.3	23	0	-	0	0	.
chr2	241142377	241142378	chr2:241142378:G:C	rs2074830	G	C	G	Sox2_MA0143.3	8	0	-	0	0	.
chr2	241170178	241170179	chr2:241170179:A:G	rs10185639	A	G	G	Sox2_MA0143.3	3	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr2	241223943	241223944	chr2:241223944:G:A	rs7590653	G	A	C	Sox2_MA0143.3	-12	0	-	0	0	.
chr2	241229560	241229561	chr2:241229561:T:C	rs15129	T	C	C	Sox2_MA0143.3	18	0	+	0	0	.
chr2	241300811	241300812	chr2:241300812:C:T	rs73116332	C	T	C	Sox2_MA0143.3	8	0	-	0	0	.
chr2	241414408	241414409	chr2:241414409:G:A	rs16843650	G	A	G	Sox2_MA0143.3	17	0	+	0	0	.
chr2	241552812	241552813	chr2:241552813:G:A	rs62191729	G	A	G	Sox2_MA0143.3	-11	0	+	0	0	.
chr2	241558435	241558436	chr2:241558436:A:G	rs56103920	A	G	A	Sox2_MA0143.3	22	0	-	0	0	.
chr2	241665673	241665674	chr2:241665674:G:A	rs34412996	G	A	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr2	241733345	241733346	chr2:241733346:C:A	rs71430378	C	A	A	Sox2_MA0143.3	11	0	-	0	0	.
chr2	241762398	241762399	chr2:241762399:C:T	rs1106416	C	T	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr2	241774073	241774074	chr2:241774074:A:G	rs111950820	A	G	A	Sox2_MA0143.3	-6	0	+	0	0	.
chr2	241774097	241774098	chr2:241774098:T:C	rs115381489	T	C	T	Sox2_MA0143.3	18	0	+	0	0	.
chr2	241778279	241778280	chr2:241778280:G:A	rs77111076	G	A	G	Sox2_MA0143.3	0	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr2	241822218	241822219	chr2:241822219:G:A	rs4441512	G	A	A	Sox2_MA0143.3	-16	0	-	0	0	.
chr2	241829563	241829564	chr2:241829564:A:G	rs11676038	A	G	-	Sox2_MA0143.3	-20	0	+	0	0	.
chr2	241854910	241854911	chr2:241854911:T:C	rs7565639	T	C	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr2	241892232	241892233	chr2:241892233:C:G	rs7576716	C	G	.	Sox2_MA0143.3	-19	0	-	0	0	.
chr2	241899323	241899324	chr2:241899324:C:T	rs78389167	C	T	.	Sox2_MA0143.3	-18	0	+	0	0	.
chr2	241903049	241903050	chr2:241903050:C:T	rs112433513	C	T	.	Sox2_MA0143.3	0	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr2	241907582	241907583	chr2:241907583:A:G	rs7575012	A	G	.	Sox2_MA0143.3	-3	0	+	0	0	.
chr2	241924046	241924047	chr2:241924047:G:A	rs79318235	G	A	.	Sox2_MA0143.3	-16	0	+	0	0	.
chr2	241981604	241981605	chr2:241981605:A:G	rs13427724	A	G	.	Sox2_MA0143.3	6	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr2	241989223	241989224	chr2:241989224:G:A	rs13411493	G	A	.	Sox2_MA0143.3	-10	0	+	0	0	.
chr2	241996956	241996957	chr2:241996957:G:T	rs7596765	G	T	.	Sox2_MA0143.3	-1	0	+	0	0	.
chr2	241997577	241997578	chr2:241997578:T:C	rs75516578	T	C	.	Sox2_MA0143.3	-8	0	+	0	0	.
chr20	256410	256411	chr20:256411:G:C	rs375084	G	C	G	Sox2_MA0143.3	8	0	-	0	0	.
chr20	329385	329386	chr20:329386:G:C	rs13043818	G	C	A	Sox2_MA0143.3	20	0	+	0	0	.
chr20	330645	330646	chr20:330646:C:T	rs742608	C	T	T	Sox2_MA0143.3	15	0	+	0	0	.
chr20	375358	375359	chr20:375359:T:G	rs6084236	T	G	t	Sox2_MA0143.3	-10	0	+	0	0	.
chr20	459798	459799	chr20:459799:C:T	rs150207	C	T	T	Sox2_MA0143.3	-8	0	-	0	0	.
chr20	572624	572625	chr20:572625:G:A	rs8122732	G	A	G	Sox2_MA0143.3	14	0	+	0	0	.
chr20	653976	653977	chr20:653977:C:T	rs12481467	C	T	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr20	667663	667664	chr20:667664:T:C	rs114485246	T	C	T	Sox2_MA0143.3	20	0	-	0	0	.
chr20	705069	705070	chr20:705070:C:A	rs11907301	C	A	C	Sox2_MA0143.3	13	0	+	0	0	.
chr20	709619	709620	chr20:709620:T:C	rs148261235	T	C	T	Sox2_MA0143.3	-17	0	+	0	0	.
chr20	710111	710112	chr20:710112:C:T	rs1030366543	C	T	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr20	728353	728354	chr20:728354:G:T	rs143443104	G	T	G	Sox2_MA0143.3	27	0	-	0	0	.
chr20	728370	728371	chr20:728371:G:A	rs112465128	G	A	G	Sox2_MA0143.3	10	0	-	0	0	.
chr20	783194	783195	chr20:783195:A:G	rs6085880	A	G	a	Sox2_MA0143.3	21	0	+	0	0	.
chr20	798716	798717	chr20:798717:C:T	rs6077172	C	T	c	Sox2_MA0143.3	22	0	+	0	0	.
chr20	826033	826034	chr20:826034:T:C	rs672385	T	C	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr20	903426	903427	chr20:903427:G:A	rs6133576	G	A	A	Sox2_MA0143.3	5	1	+	9.019595766176417	2.110840986861197	CCATTGTC
chr20	904632	904633	chr20:904633:C:A	rs76910480	C	A	C	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr20	914307	914308	chr20:914308:G:A	rs11087800	G	A	A	Sox2_MA0143.3	-9	0	-	0	0	.
chr20	932391	932392	chr20:932392:G:T	rs6118267	G	T	G	Sox2_MA0143.3	12	0	-	0	0	.
chr20	949916	949917	chr20:949917:T:C	rs530652	T	C	C	Sox2_MA0143.3	13	0	+	0	0	.
chr20	1021398	1021399	chr20:1021399:C:A	rs2207321	C	A	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr20	1130970	1130971	chr20:1130971:T:C	rs2143226	T	C	T	Sox2_MA0143.3	18	0	-	0	0	.
chr20	1301366	1301367	chr20:1301367:G:A	rs76794623	G	A	G	Sox2_MA0143.3	-9	0	+	0	0	.
chr20	1337171	1337172	chr20:1337172:C:T	rs6104943	C	T	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr20	1337185	1337186	chr20:1337186:T:G	rs1051543180	T	G	T	Sox2_MA0143.3	-20	0	-	0	0	.
chr20	1345356	1345357	chr20:1345357:A:G	rs6134656	A	G	A	Sox2_MA0143.3	-1	0	-	0	0	.
chr20	1370863	1370864	chr20:1370864:G:C	rs141671591	G	C	G	Sox2_MA0143.3	25	0	-	0	0	.
chr20	1388710	1388711	chr20:1388711:C:T	rs533112637	C	T	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr20	1400381	1400382	chr20:1400382:A:T	rs59681252	A	T	A	Sox2_MA0143.3	18	0	-	0	0	.
chr20	1400740	1400741	chr20:1400741:T:C	rs142095093	T	C	T	Sox2_MA0143.3	-16	0	-	0	0	.
chr20	1402680	1402681	chr20:1402681:T:C	rs4814223	T	C	C	Sox2_MA0143.3	12	0	+	0	0	.
chr20	1409602	1409603	chr20:1409603:A:G	rs6514392	A	G	G	Sox2_MA0143.3	6	1	-	9.019595766176417	2.110840986861197	CCATTGTC
chr20	1416966	1416967	chr20:1416967:G:A	rs78117881	G	A	G	Sox2_MA0143.3	5	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr20	1418606	1418607	chr20:1418607:C:T	rs6105110	C	T	T	Sox2_MA0143.3	21	0	-	0	0	.
chr20	1516976	1516977	chr20:1516977:T:C	rs8182997	T	C	T	Sox2_MA0143.3	8	0	+	0	0	.
chr20	1564821	1564822	chr20:1564822:T:C	rs2253693	T	C	C	Sox2_MA0143.3	25	0	+	0	0	.
chr20	1578325	1578326	chr20:1578326:C:T	rs146841337	C	T	.	Sox2_MA0143.3	-8	0	-	0	0	.
chr20	1651069	1651070	chr20:1651070:A:G	rs4410351	A	G	A	Sox2_MA0143.3	22	0	-	0	0	.
chr20	1733448	1733449	chr20:1733449:A:T	rs202457	A	T	-	Sox2_MA0143.3	-14	0	-	0	0	.
chr20	1758067	1758068	chr20:1758068:C:T	rs57207776	C	T	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr20	1777541	1777542	chr20:1777542:T:C	rs6135958	T	C	T	Sox2_MA0143.3	27	0	-	0	0	.
chr20	1811879	1811880	chr20:1811880:A:C	chr20:1811880:A:C	A	C	A	Sox2_MA0143.3	-5	0	+	0	0	.
chr20	1811885	1811886	chr20:1811886:C:G	chr20:1811886:C:G	C	G	C	Sox2_MA0143.3	1	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr20	1876744	1876745	chr20:1876745:G:A	rs191062636	G	A	G	Sox2_MA0143.3	12	0	-	0	0	.
chr20	1876766	1876767	chr20:1876767:G:A	rs35726302	G	A	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr20	1884229	1884230	chr20:1884230:G:A	rs62192689	G	A	g	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr20	1890135	1890136	chr20:1890136:A:G	rs12625334	A	G	A	Sox2_MA0143.3	22	0	-	0	0	.
chr20	1913333	1913334	chr20:1913334:G:C	rs4813324	G	C	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr20	1913339	1913340	chr20:1913340:C:G	rs4813325	C	G	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr20	1934257	1934258	chr20:1934258:C:T	chr20:1934258:C:T	C	T	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr20	1964979	1964980	chr20:1964980:G:A	rs910075	G	A	A	Sox2_MA0143.3	-6	0	+	0	0	.
chr20	2118824	2118825	chr20:2118825:A:G	rs1052626688	A	G	A	Sox2_MA0143.3	20	0	+	0	0	.
chr20	2119004	2119005	chr20:2119005:C:T	rs992225681	C	T	C	Sox2_MA0143.3	11	0	+	0	0	.
chr20	2164717	2164718	chr20:2164718:T:C	rs6035735	T	C	T	Sox2_MA0143.3	18	0	-	0	0	.
chr20	2165933	2165934	chr20:2165934:A:G	rs6113074	A	G	A	Sox2_MA0143.3	3	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr20	2176483	2176484	chr20:2176484:G:A	rs6137228	G	A	A	Sox2_MA0143.3	-5	0	-	0	0	.
chr20	2231026	2231027	chr20:2231027:C:T	rs4815056	C	T	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr20	2330012	2330013	chr20:2330013:T:C	rs6048207	T	C	C	Sox2_MA0143.3	13	0	-	0	0	.
chr20	2330017	2330018	chr20:2330018:A:G	rs6048208	A	G	A	Sox2_MA0143.3	8	0	-	0	0	.
chr20	2330040	2330041	chr20:2330041:C:T	rs214822	C	T	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr20	2477513	2477514	chr20:2477514:T:C	rs4815266	T	C	C	Sox2_MA0143.3	6	1	+	9.206767037375712	2.298012258060492	CCTTTGTC
chr20	2498551	2498552	chr20:2498552:A:G	rs1547063	A	G	a	Sox2_MA0143.3	4	1	-	9.800647049772198	2.8918922704569785	CCTTTGTT
chr20	2544774	2544775	chr20:2544775:A:G	rs2422778	A	G	G	Sox2_MA0143.3	4	1	-	9.800647049772198	2.8918922704569785	CCTTTGTT
chr20	2559358	2559359	chr20:2559359:G:A	rs2325889	G	A	A	Sox2_MA0143.3	19	0	+	0	0	.
chr20	2704732	2704733	chr20:2704733:G:A	rs78545541	G	A	G	Sox2_MA0143.3	9	0	+	0	0	.
chr20	2774841	2774842	chr20:2774842:T:C	rs6138892	T	C	T	Sox2_MA0143.3	6	1	+	9.206767037375712	2.298012258060492	CCTTTGTC
chr20	2801086	2801087	chr20:2801087:A:G	rs73584044	A	G	A	Sox2_MA0143.3	26	0	+	0	0	.
chr20	2923217	2923218	chr20:2923218:A:G	rs74597783	A	G	A	Sox2_MA0143.3	14	0	-	0	0	.
chr20	2940876	2940877	chr20:2940877:T:A	rs6084208	T	A	T	Sox2_MA0143.3	3	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr20	2973781	2973782	chr20:2973782:A:G	rs113052763	A	G	A	Sox2_MA0143.3	-11	0	-	0	0	.
chr20	2985105	2985106	chr20:2985106:T:G	rs116852959	T	G	T	Sox2_MA0143.3	-9	0	-	0	0	.
chr20	3052528	3052529	chr20:3052529:T:C	rs2326054	T	C	T	Sox2_MA0143.3	2	1	-	9.019595766176417	2.900948058900136	CCATTGTC
chr20	3067461	3067462	chr20:3067462:T:G	rs80026968	T	G	T	Sox2_MA0143.3	3	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr20	3067890	3067891	chr20:3067891:G:A	rs11697250	G	A	A	Sox2_MA0143.3	13	0	-	0	0	.
chr20	3069746	3069747	chr20:3069747:T:C	rs3761248	T	C	T	Sox2_MA0143.3	13	0	-	0	0	.
chr20	3095503	3095504	chr20:3095504:C:T	rs73890851	C	T	C	Sox2_MA0143.3	7	1	+	9.206767037375712	9.800647049772198	CCTTTGTC
chr20	3169219	3169220	chr20:3169220:C:T	rs112399729	C	T	C	Sox2_MA0143.3	26	0	+	0	0	.
chr20	3204476	3204477	chr20:3204477:A:T	rs11697186	A	T	A	Sox2_MA0143.3	4	1	-	8.864090315184848	1.9553355358696274	CCTTTGTG
chr20	3204479	3204480	chr20:3204480:G:C	rs74787085	G	C	G	Sox2_MA0143.3	1	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr20	3204484	3204485	chr20:3204485:A:T	rs374433462	A	T	A	Sox2_MA0143.3	-4	0	-	0	0	.
chr20	3223559	3223560	chr20:3223560:A:G	rs147032627	A	G	A	Sox2_MA0143.3	-9	0	+	0	0	.
chr20	3223584	3223585	chr20:3223585:G:A	rs13830	G	A	G	Sox2_MA0143.3	16	0	+	0	0	.
chr20	3315392	3315393	chr20:3315393:T:C	rs2236114	T	C	T	Sox2_MA0143.3	-3	0	+	0	0	.
chr20	3380950	3380951	chr20:3380951:G:C	rs79286462	G	C	G	Sox2_MA0143.3	-3	0	+	0	0	.
chr20	3407297	3407298	chr20:3407298:T:C	rs575410136	T	C	T	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr20	3710924	3710925	chr20:3710925:A:T	rs73608191	A	T	A	Sox2_MA0143.3	-18	0	-	0	0	.
chr20	3885507	3885508	chr20:3885508:T:C	rs6116078	T	C	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr20	3933654	3933655	chr20:3933655:G:A	rs17286349	G	A	T	Sox2_MA0143.3	7	1	-	9.206767037375712	9.800647049772198	CCTTTGTC
chr20	3965176	3965177	chr20:3965177:T:C	rs6052196	T	C	C	Sox2_MA0143.3	9	0	-	0	0	.
chr20	4011468	4011469	chr20:4011469:T:A	rs966671903	T	A	T	Sox2_MA0143.3	-13	0	-	0	0	.
chr20	4014785	4014786	chr20:4014786:T:A	rs7270276	T	A	T	Sox2_MA0143.3	15	0	-	0	0	.
chr20	4014786	4014787	chr20:4014787:C:G	rs7261214	C	G	C	Sox2_MA0143.3	14	0	-	0	0	.
chr20	4037515	4037516	chr20:4037516:G:T	rs62212691	G	T	-	Sox2_MA0143.3	1	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr20	4060313	4060314	chr20:4060314:C:G	rs56044933	C	G	.	Sox2_MA0143.3	11	0	-	0	0	.
chr20	4062638	4062639	chr20:4062639:G:A	rs6076598	G	A	G	Sox2_MA0143.3	15	0	-	0	0	.
chr20	4083611	4083612	chr20:4083612:C:T	rs6133082	C	T	C	Sox2_MA0143.3	24	0	+	0	0	.
chr20	4085233	4085234	chr20:4085234:T:C	rs73072675	T	C	T	Sox2_MA0143.3	25	0	-	0	0	.
chr20	4167120	4167121	chr20:4167121:A:G	rs145102901	A	G	A	Sox2_MA0143.3	3	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr20	4171898	4171899	chr20:4171899:A:C	rs6139348	A	C	C	Sox2_MA0143.3	2	1	-	8.864090315184848	2.5582713367092715	CCTTTGTG
chr20	4216056	4216057	chr20:4216057:A:G	rs910951	A	G	A	Sox2_MA0143.3	-13	0	+	0	0	.
chr20	4220482	4220483	chr20:4220483:T:A	rs709023	T	A	T	Sox2_MA0143.3	-6	0	-	0	0	.
chr20	4246876	4246877	chr20:4246877:G:A	rs946189	G	A	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr20	4260423	4260424	chr20:4260424:G:A	rs73610173	G	A	A	Sox2_MA0143.3	22	0	-	0	0	.
chr20	4263252	4263253	chr20:4263253:C:T	rs73610175	C	T	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr20	4301427	4301428	chr20:4301428:C:T	rs6084692	C	T	C	Sox2_MA0143.3	18	0	+	0	0	.
chr20	4333333	4333334	chr20:4333334:C:T	rs10211838	C	T	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr20	4371494	4371495	chr20:4371495:C:G	rs537688735	C	G	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr20	4513042	4513043	chr20:4513043:C:T	rs73893468	C	T	T	Sox2_MA0143.3	11	0	-	0	0	.
chr20	4569413	4569414	chr20:4569414:T:C	rs6037879	T	C	T	Sox2_MA0143.3	-20	0	-	0	0	.
chr20	4618880	4618881	chr20:4618881:A:G	chr20:4618881:A:G	A	G	A	Sox2_MA0143.3	25	0	-	0	0	.
chr20	4720429	4720430	chr20:4720430:C:T	rs62199386	C	T	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr20	4744201	4744202	chr20:4744202:A:C	rs6052815	A	C	A	Sox2_MA0143.3	-12	0	-	0	0	.
chr20	4748930	4748931	chr20:4748931:G:A	rs6037949	G	A	G	Sox2_MA0143.3	-3	0	+	0	0	.
chr20	4761752	4761753	chr20:4761753:A:G	rs6052854	A	G	G	Sox2_MA0143.3	-12	0	+	0	0	.
chr20	4813543	4813544	chr20:4813544:A:G	rs115710634	A	G	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr20	4819390	4819391	chr20:4819391:C:T	rs2423046	C	T	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr20	4873284	4873285	chr20:4873285:C:T	rs56848176	C	T	C	Sox2_MA0143.3	25	0	-	0	0	.
chr20	4904636	4904637	chr20:4904637:G:A	rs1002557178	G	A	g	Sox2_MA0143.3	-19	0	-	0	0	.
chr20	4911112	4911113	chr20:4911113:A:G	rs6133175	A	G	A	Sox2_MA0143.3	-4	0	+	0	0	.
chr20	4986294	4986295	chr20:4986295:G:A	rs4813726	G	A	G	Sox2_MA0143.3	22	0	-	0	0	.
chr20	4995158	4995159	chr20:4995159:G:T	rs6053024	G	T	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr20	4997383	4997384	chr20:4997384:A:G	rs76540348	A	G	A	Sox2_MA0143.3	7	1	+	3.5547341015215945	8.864090315184848	CCTTTGTA
chr20	4998475	4998476	chr20:4998476:C:T	rs111733329	C	T	C	Sox2_MA0143.3	7	1	-	8.864090315184848	3.5547341015215945	CCTTTGTG
chr20	4998484	4998485	chr20:4998485:C:T	rs11699437	C	T	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr20	5074491	5074492	chr20:5074492:A:G	rs418062	A	G	G	Sox2_MA0143.3	-2	0	+	0	0	.
chr20	5090382	5090383	chr20:5090383:G:A	rs1550699	G	A	G	Sox2_MA0143.3	7	1	-	9.206767037375712	9.800647049772198	CCTTTGTC
chr20	5092074	5092075	chr20:5092075:G:T	rs6038067	G	T	T	Sox2_MA0143.3	-18	0	+	0	0	.
chr20	5171273	5171274	chr20:5171274:A:G	rs17785258	A	G	A	Sox2_MA0143.3	-8	0	+	0	0	.
chr20	5192195	5192196	chr20:5192196:G:A	rs150430322	G	A	G	Sox2_MA0143.3	8	0	+	0	0	.
chr20	5192302	5192303	chr20:5192303:G:C	rs34915502	G	C	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr20	5213134	5213135	chr20:5213135:A:G	rs10439597	A	G	A	Sox2_MA0143.3	-17	0	-	0	0	.
chr20	5504387	5504388	chr20:5504388:C:G	rs2423106	C	G	G	Sox2_MA0143.3	-3	0	+	0	0	.
chr20	5526689	5526690	chr20:5526690:A:G	rs6116822	A	G	G	Sox2_MA0143.3	21	0	+	0	0	.
chr20	5539737	5539738	chr20:5539738:G:C	rs74773776	G	C	G	Sox2_MA0143.3	21	0	+	0	0	.
chr20	5570387	5570388	chr20:5570388:G:C	rs1056244	G	C	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr20	5646577	5646578	chr20:5646578:T:C	rs142653852	T	C	T	Sox2_MA0143.3	-20	0	+	0	0	.
chr20	5688089	5688090	chr20:5688090:T:C	rs931973	T	C	T	Sox2_MA0143.3	-10	0	+	0	0	.
chr20	5732580	5732581	chr20:5732581:T:C	rs1001561924	T	C	T	Sox2_MA0143.3	9	0	-	0	0	.
chr20	5736395	5736396	chr20:5736396:C:T	rs77652201	C	T	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr20	5787165	5787166	chr20:5787166:G:A	rs6053692	G	A	G	Sox2_MA0143.3	25	0	-	0	0	.
chr20	5819406	5819407	chr20:5819407:A:G	rs8183987	A	G	A	Sox2_MA0143.3	-7	0	+	0	0	.
chr20	5828167	5828168	chr20:5828168:A:G	rs1294717	A	G	A	Sox2_MA0143.3	-17	0	+	0	0	.
chr20	5878311	5878312	chr20:5878312:T:C	rs6085308	T	C	T	Sox2_MA0143.3	-1	0	+	0	0	.
chr20	5918901	5918902	chr20:5918902:G:C	rs760854910	G	C	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr20	5980044	5980045	chr20:5980045:T:C	rs236106	T	C	C	Sox2_MA0143.3	18	0	+	0	0	.
chr20	6004730	6004731	chr20:6004731:G:T	rs6417628	G	T	T	Sox2_MA0143.3	1	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr20	6004746	6004747	chr20:6004747:A:G	rs6053824	A	G	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr20	6061640	6061641	chr20:6061641:C:G	rs566778160	C	G	C	Sox2_MA0143.3	19	0	+	0	0	.
chr20	6074390	6074391	chr20:6074391:G:A	rs6117065	G	A	A	Sox2_MA0143.3	27	0	-	0	0	.
chr20	6142804	6142805	chr20:6142805:G:C	rs6117095	G	C	G	Sox2_MA0143.3	0	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr20	6390598	6390599	chr20:6390599:G:C	rs2209762	G	C	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr20	6394510	6394511	chr20:6394511:G:T	rs2876020	G	T	G	Sox2_MA0143.3	12	0	+	0	0	.
chr20	6401307	6401308	chr20:6401308:G:C	rs11087729	G	C	G	Sox2_MA0143.3	23	0	-	0	0	.
chr20	6415410	6415411	chr20:6415411:G:C	rs77999966	G	C	G	Sox2_MA0143.3	16	0	-	0	0	.
chr20	6416644	6416645	chr20:6416645:A:G	rs2423159	A	G	A	Sox2_MA0143.3	4	1	-	8.676919043985553	1.7681642646703322	CCATTGTG
chr20	6476592	6476593	chr20:6476593:C:T	rs62200001	C	T	T	Sox2_MA0143.3	-11	0	+	0	0	.
chr20	6476613	6476614	chr20:6476614:C:T	rs6117282	C	T	C	Sox2_MA0143.3	10	0	+	0	0	.
chr20	6519814	6519815	chr20:6519815:C:T	rs6085589	C	T	T	Sox2_MA0143.3	16	0	+	0	0	.
chr20	6561986	6561987	chr20:6561987:C:T	rs1407031	C	T	c	Sox2_MA0143.3	-15	0	+	0	0	.
chr20	6588126	6588127	chr20:6588127:G:A	rs6133334	G	A	.	Sox2_MA0143.3	5	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr20	6659141	6659142	chr20:6659142:G:A	rs62198798	G	A	G	Sox2_MA0143.3	-16	0	-	0	0	.
chr20	6691175	6691176	chr20:6691176:A:G	rs6054463	A	G	G	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr20	6703402	6703403	chr20:6703403:A:C	rs62194886	A	C	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr20	6714273	6714274	chr20:6714274:C:T	rs12106163	C	T	C	Sox2_MA0143.3	17	0	-	0	0	.
chr20	6714678	6714679	chr20:6714679:G:T	chr20:6714679:G:T	G	T	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr20	6768092	6768093	chr20:6768093:G:A	rs115405923	G	A	G	Sox2_MA0143.3	13	0	-	0	0	.
chr20	6786706	6786707	chr20:6786707:C:T	rs57667344	C	T	C	Sox2_MA0143.3	17	0	+	0	0	.
chr20	6829676	6829677	chr20:6829677:A:G	rs190587394	A	G	A	Sox2_MA0143.3	27	0	+	0	0	.
chr20	6845414	6845415	chr20:6845415:C:A	rs6038619	C	A	C	Sox2_MA0143.3	27	0	+	0	0	.
chr20	6886269	6886270	chr20:6886270:G:T	rs1883717	G	T	G	Sox2_MA0143.3	0	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr20	6941960	6941961	chr20:6941961:C:G	rs13044273	C	G	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr20	7122682	7122683	chr20:7122683:T:A	rs185748976	T	A	T	Sox2_MA0143.3	8	0	-	0	0	.
chr20	7463416	7463417	chr20:7463417:C:A	rs2326929	C	A	c	Sox2_MA0143.3	17	0	-	0	0	.
chr20	7670725	7670726	chr20:7670726:T:C	rs6117913	T	C	t	Sox2_MA0143.3	-11	0	+	0	0	.
chr20	7704223	7704224	chr20:7704224:A:G	rs76988760	A	G	A	Sox2_MA0143.3	-3	0	+	0	0	.
chr20	7736641	7736642	chr20:7736642:C:T	rs180910531	C	T	T	Sox2_MA0143.3	-10	0	-	0	0	.
chr20	7851703	7851704	chr20:7851704:C:A	rs74183537	C	A	C	Sox2_MA0143.3	15	0	-	0	0	.
chr20	7851732	7851733	chr20:7851733:G:A	rs6077276	G	A	A	Sox2_MA0143.3	-14	0	-	0	0	.
chr20	7860014	7860015	chr20:7860015:G:A	rs6117968	G	A	A	Sox2_MA0143.3	25	0	+	0	0	.
chr20	8061775	8061776	chr20:8061776:C:T	rs6039021	C	T	T	Sox2_MA0143.3	-1	0	+	0	0	.
chr20	8073904	8073905	chr20:8073905:C:T	rs6140524	C	T	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr20	8105166	8105167	chr20:8105167:A:G	rs1079909	A	G	G	Sox2_MA0143.3	-5	0	+	0	0	.
chr20	8214073	8214074	chr20:8214074:C:T	rs73897318	C	T	T	Sox2_MA0143.3	10	0	-	0	0	.
chr20	8214080	8214081	chr20:8214081:A:G	rs548107088	A	G	A	Sox2_MA0143.3	3	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr20	8218999	8219000	chr20:8219000:G:A	rs75462360	G	A	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr20	8344770	8344771	chr20:8344771:G:T	rs2745787	G	T	T	Sox2_MA0143.3	-11	0	-	0	0	.
chr20	8425054	8425055	chr20:8425055:A:G	rs1775196	A	G	A	Sox2_MA0143.3	11	0	-	0	0	.
chr20	8425076	8425077	chr20:8425077:G:A	rs1703636	G	A	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr20	8430074	8430075	chr20:8430075:A:G	rs771945	A	G	G	Sox2_MA0143.3	-16	0	-	0	0	.
chr20	8435339	8435340	chr20:8435340:G:A	rs771939	G	A	A	Sox2_MA0143.3	17	0	-	0	0	.
chr20	8528297	8528298	chr20:8528298:A:G	rs62197643	A	G	A	Sox2_MA0143.3	21	0	-	0	0	.
chr20	8542273	8542274	chr20:8542274:A:C	rs3817879	A	C	A	Sox2_MA0143.3	13	0	+	0	0	.
chr20	8646255	8646256	chr20:8646256:C:T	rs1018443	C	T	T	Sox2_MA0143.3	15	0	+	0	0	.
chr20	8828457	8828458	chr20:8828458:G:A	rs6077430	G	A	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr20	8832861	8832862	chr20:8832862:A:G	rs6516410	A	G	A	Sox2_MA0143.3	3	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr20	8834932	8834933	chr20:8834933:G:T	rs6118346	G	T	G	Sox2_MA0143.3	5	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr20	8964451	8964452	chr20:8964452:A:C	rs67308886	A	C	A	Sox2_MA0143.3	24	0	-	0	0	.
chr20	9028758	9028759	chr20:9028759:A:C	rs6108236	A	C	C	Sox2_MA0143.3	4	1	-	9.800647049772198	2.8918922704569785	CCTTTGTT
chr20	9036800	9036801	chr20:9036801:A:T	rs6108238	A	T	A	Sox2_MA0143.3	14	0	+	0	0	.
chr20	9051731	9051732	chr20:9051732:G:T	rs6108246	G	T	T	Sox2_MA0143.3	-6	0	-	0	0	.
chr20	9053120	9053121	chr20:9053121:T:C	rs6140848	T	C	C	Sox2_MA0143.3	19	0	+	0	0	.
chr20	9416482	9416483	chr20:9416483:C:A	rs3787307	C	A	A	Sox2_MA0143.3	-4	0	+	0	0	.
chr20	9519150	9519151	chr20:9519151:A:G	rs2206385	A	G	A	Sox2_MA0143.3	27	0	-	0	0	.
chr20	9689121	9689122	chr20:9689122:G:A	rs34088221	G	A	G	Sox2_MA0143.3	20	0	+	0	0	.
chr20	9719713	9719714	chr20:9719714:T:C	rs67894580	T	C	T	Sox2_MA0143.3	15	0	+	0	0	.
chr20	9789097	9789098	chr20:9789098:G:A	rs1883545	G	A	G	Sox2_MA0143.3	-12	0	+	0	0	.
chr20	9878301	9878302	chr20:9878302:T:A	rs73898633	T	A	T	Sox2_MA0143.3	-6	0	-	0	0	.
chr20	9930285	9930286	chr20:9930286:T:C	rs6087067	T	C	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr20	10125755	10125756	chr20:10125756:T:C	rs522172	T	C	C	Sox2_MA0143.3	-12	0	-	0	0	.
chr20	10125780	10125781	chr20:10125781:C:A	rs598563	C	A	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr20	10135737	10135738	chr20:10135738:A:G	rs79117221	A	G	A	Sox2_MA0143.3	17	0	-	0	0	.
chr20	10169985	10169986	chr20:10169986:T:C	rs6039750	T	C	T	Sox2_MA0143.3	16	0	-	0	0	.
chr20	10216812	10216813	chr20:10216813:A:T	rs6077690	A	T	A	Sox2_MA0143.3	16	0	-	0	0	.
chr20	10253882	10253883	chr20:10253883:G:A	rs76607862	G	A	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr20	10329800	10329801	chr20:10329801:A:G	rs362614	A	G	A	Sox2_MA0143.3	6	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr20	10370731	10370732	chr20:10370732:C:T	rs6032859	C	T	T	Sox2_MA0143.3	13	0	+	0	0	.
chr20	10487953	10487954	chr20:10487954:A:G	rs668965	A	G	A	Sox2_MA0143.3	10	0	+	0	0	.
chr20	10541369	10541370	chr20:10541370:A:G	rs541874557	A	G	A	Sox2_MA0143.3	-11	0	+	0	0	.
chr20	10633786	10633787	chr20:10633787:A:G	rs2143619	A	G	G	Sox2_MA0143.3	21	0	-	0	0	.
chr20	10640524	10640525	chr20:10640525:C:A	rs79656997	C	A	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr20	10667062	10667063	chr20:10667063:A:G	rs906789160	A	G	A	Sox2_MA0143.3	-3	0	-	0	0	.
chr20	10667294	10667295	chr20:10667295:C:T	rs147713631	C	T	C	Sox2_MA0143.3	18	0	+	0	0	.
chr20	10667302	10667303	chr20:10667303:A:G	rs3790163	A	G	G	Sox2_MA0143.3	26	0	+	0	0	.
chr20	10762375	10762376	chr20:10762376:T:G	rs6108695	T	G	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr20	10857779	10857780	chr20:10857780:T:C	rs73896403	T	C	T	Sox2_MA0143.3	-15	0	+	0	0	.
chr20	10870625	10870626	chr20:10870626:G:A	rs6131127	G	A	G	Sox2_MA0143.3	11	0	-	0	0	.
chr20	11080276	11080277	chr20:11080277:G:A	rs77790871	G	A	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr20	11144156	11144157	chr20:11144157:C:G	rs6134136	C	G	G	Sox2_MA0143.3	24	0	+	0	0	.
chr20	11218980	11218981	chr20:11218981:A:G	rs6033061	A	G	G	Sox2_MA0143.3	12	0	-	0	0	.
chr20	11266301	11266302	chr20:11266302:A:G	rs7269444	A	G	A	Sox2_MA0143.3	27	0	+	0	0	.
chr20	11271452	11271453	chr20:11271453:C:T	rs74748693	C	T	C	Sox2_MA0143.3	27	0	+	0	0	.
chr20	11300657	11300658	chr20:11300658:A:G	rs4813052	A	G	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr20	11379337	11379338	chr20:11379338:A:C	rs8122050	A	C	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr20	11394317	11394318	chr20:11394318:C:T	rs6078164	C	T	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr20	11447916	11447917	chr20:11447917:C:T	rs4239707	C	T	C	Sox2_MA0143.3	10	0	+	0	0	.
chr20	11451770	11451771	chr20:11451771:T:C	rs117926495	T	C	T	Sox2_MA0143.3	15	0	-	0	0	.
chr20	11451791	11451792	chr20:11451792:G:A	rs553841958	G	A	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr20	11646335	11646336	chr20:11646336:G:C	rs6078275	G	C	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr20	11738898	11738899	chr20:11738899:A:C	rs2423600	A	C	C	Sox2_MA0143.3	13	0	-	0	0	.
chr20	11776104	11776105	chr20:11776105:C:T	rs2670439	C	T	C	Sox2_MA0143.3	0	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr20	11776118	11776119	chr20:11776119:A:G	rs6040877	A	G	G	Sox2_MA0143.3	14	0	+	0	0	.
chr20	11861535	11861536	chr20:11861536:G:A	rs6131275	G	A	G	Sox2_MA0143.3	0	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr20	11912350	11912351	chr20:11912351:A:G	rs554853508	A	G	A	Sox2_MA0143.3	-7	0	-	0	0	.
chr20	11992578	11992579	chr20:11992579:G:C	rs56411315	G	C	G	Sox2_MA0143.3	1	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr20	11992597	11992598	chr20:11992598:C:T	rs17262364	C	T	T	Sox2_MA0143.3	-18	0	-	0	0	.
chr20	12210845	12210846	chr20:12210846:T:C	rs2064686	T	C	T	Sox2_MA0143.3	11	0	-	0	0	.
chr20	12246598	12246599	chr20:12246599:T:G	rs6041224	T	G	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr20	12917207	12917208	chr20:12917208:T:C	rs149383	T	C	T	Sox2_MA0143.3	22	0	+	0	0	.
chr20	12925589	12925590	chr20:12925590:C:T	rs113911165	C	T	C	Sox2_MA0143.3	0	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr20	12937036	12937037	chr20:12937037:A:G	rs145460712	A	G	A	Sox2_MA0143.3	8	0	+	0	0	.
chr20	12966045	12966046	chr20:12966046:G:A	rs115104437	G	A	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr20	12966087	12966088	chr20:12966088:G:A	rs187807360	G	A	G	Sox2_MA0143.3	22	0	+	0	0	.
chr20	13013546	13013547	chr20:13013547:T:C	rs139318384	T	C	T	Sox2_MA0143.3	15	0	+	0	0	.
chr20	13119981	13119982	chr20:13119982:C:T	rs6078922	C	T	T	Sox2_MA0143.3	-4	0	+	0	0	.
chr20	13214762	13214763	chr20:13214763:T:G	rs6131452	T	G	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr20	13249724	13249725	chr20:13249725:C:A	rs73261066	C	A	A	Sox2_MA0143.3	-6	0	-	0	0	.
chr20	13559316	13559317	chr20:13559317:C:A	rs2070306	C	A	A	Sox2_MA0143.3	18	0	-	0	0	.
chr20	13649904	13649905	chr20:13649905:A:G	rs35875212	A	G	A	Sox2_MA0143.3	15	0	-	0	0	.
chr20	13718177	13718178	chr20:13718178:C:T	rs926937789	C	T	C	Sox2_MA0143.3	23	0	+	0	0	.
chr20	13842460	13842461	chr20:13842461:C:G	rs117390089	C	G	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr20	14020181	14020182	chr20:14020182:C:T	rs12481175	C	T	T	Sox2_MA0143.3	-1	0	+	0	0	.
chr20	14154314	14154315	chr20:14154315:G:A	rs574150770	G	A	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr20	14154328	14154329	chr20:14154329:G:A	rs6042556	G	A	A	Sox2_MA0143.3	-15	0	-	0	0	.
chr20	14334725	14334726	chr20:14334726:T:C	rs16994493	T	C	T	Sox2_MA0143.3	-12	0	+	0	0	.
chr20	14494386	14494387	chr20:14494387:G:A	rs426611	G	A	A	Sox2_MA0143.3	-8	0	+	0	0	.
chr20	14494393	14494394	chr20:14494394:A:G	rs34202312	A	G	A	Sox2_MA0143.3	-1	0	+	0	0	.
chr20	14649798	14649799	chr20:14649799:A:G	rs8119230	A	G	A	Sox2_MA0143.3	-9	0	+	0	0	.
chr20	14764968	14764969	chr20:14764969:G:A	rs78019035	G	A	A	Sox2_MA0143.3	18	0	-	0	0	.
chr20	14778380	14778381	chr20:14778381:G:C	rs6110427	G	C	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr20	14801037	14801038	chr20:14801038:T:C	rs6135263	T	C	T	Sox2_MA0143.3	-8	0	-	0	0	.
chr20	14825111	14825112	chr20:14825112:G:A	rs76237261	G	A	G	Sox2_MA0143.3	22	0	+	0	0	.
chr20	14860418	14860419	chr20:14860419:G:A	rs6135282	G	A	G	Sox2_MA0143.3	18	0	+	0	0	.
chr20	14865347	14865348	chr20:14865348:C:T	rs117493239	C	T	C	Sox2_MA0143.3	12	0	+	0	0	.
chr20	14979743	14979744	chr20:14979744:T:C	rs2423895	T	C	T	Sox2_MA0143.3	-1	0	+	0	0	.
chr20	15071070	15071071	chr20:15071071:T:G	rs6043082	T	G	T	Sox2_MA0143.3	-13	0	-	0	0	.
chr20	15100669	15100670	chr20:15100670:A:G	rs6074840	A	G	A	Sox2_MA0143.3	7	1	+	3.5547341015215945	8.864090315184848	CCTTTGTA
chr20	15119637	15119638	chr20:15119638:A:G	rs6074844	A	G	A	Sox2_MA0143.3	-7	0	+	0	0	.
chr20	15180032	15180033	chr20:15180033:G:A	rs78143647	G	A	G	Sox2_MA0143.3	5	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr20	15248839	15248840	chr20:15248840:A:T	rs2021914	A	T	T	Sox2_MA0143.3	-13	0	+	0	0	.
chr20	15450871	15450872	chr20:15450872:T:C	rs78719581	T	C	T	Sox2_MA0143.3	3	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr20	15523451	15523452	chr20:15523452:C:T	rs1233777	C	T	T	Sox2_MA0143.3	-3	0	-	0	0	.
chr20	15628646	15628647	chr20:15628647:G:C	rs2193028	G	C	G	Sox2_MA0143.3	13	0	-	0	0	.
chr20	15642221	15642222	chr20:15642222:G:C	rs62196466	G	C	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr20	15652093	15652094	chr20:15652094:C:T	rs457392	C	T	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr20	15654350	15654351	chr20:15654351:G:A	rs16996284	G	A	A	Sox2_MA0143.3	5	1	+	9.019595766176417	2.110840986861197	CCATTGTC
chr20	15702578	15702579	chr20:15702579:A:G	rs6043462	A	G	G	Sox2_MA0143.3	9	0	+	0	0	.
chr20	15740316	15740317	chr20:15740317:A:G	rs13036467	A	G	A	Sox2_MA0143.3	3	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr20	15795539	15795540	chr20:15795540:C:T	rs6131709	C	T	T	Sox2_MA0143.3	24	0	+	0	0	.
chr20	15817581	15817582	chr20:15817582:G:A	rs148249600	G	A	G	Sox2_MA0143.3	18	0	+	0	0	.
chr20	15820954	15820955	chr20:15820955:T:C	rs12480713	T	C	C	Sox2_MA0143.3	16	0	-	0	0	.
chr20	15979187	15979188	chr20:15979188:T:C	rs6080070	T	C	C	Sox2_MA0143.3	24	0	-	0	0	.
chr20	16043998	16043999	chr20:16043999:G:T	rs775128	G	T	G	Sox2_MA0143.3	0	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr20	16052539	16052540	chr20:16052540:C:T	rs1225891	C	T	C	Sox2_MA0143.3	19	0	-	0	0	.
chr20	16058687	16058688	chr20:16058688:G:A	rs73898364	G	A	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr20	16064167	16064168	chr20:16064168:G:C	rs59633327	G	C	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr20	16144192	16144193	chr20:16144193:A:C	rs11698744	A	C	A	Sox2_MA0143.3	-2	0	-	0	0	.
chr20	16438599	16438600	chr20:16438600:T:C	rs12624346	T	C	T	Sox2_MA0143.3	16	0	-	0	0	.
chr20	16610877	16610878	chr20:16610878:G:A	rs6135809	G	A	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr20	16624364	16624365	chr20:16624365:T:C	rs6080335	T	C	T	Sox2_MA0143.3	16	0	+	0	0	.
chr20	16662560	16662561	chr20:16662561:A:T	rs1885574	A	T	A	Sox2_MA0143.3	-13	0	-	0	0	.
chr20	16695677	16695678	chr20:16695678:A:T	rs17747058	A	T	A	Sox2_MA0143.3	-11	0	-	0	0	.
chr20	16911815	16911816	chr20:16911816:C:A	rs6075142	C	A	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr20	17026764	17026765	chr20:17026765:T:C	rs34381147	T	C	T	Sox2_MA0143.3	12	0	+	0	0	.
chr20	17083723	17083724	chr20:17083724:T:G	rs56816227	T	G	T	Sox2_MA0143.3	26	0	-	0	0	.
chr20	17083743	17083744	chr20:17083744:A:G	rs6044612	A	G	A	Sox2_MA0143.3	6	1	-	8.676919043985553	1.7681642646703326	CCATTGTG
chr20	17094470	17094471	chr20:17094471:A:G	rs4239722	A	G	G	Sox2_MA0143.3	22	0	+	0	0	.
chr20	17358899	17358900	chr20:17358900:A:T	rs3920552	A	T	A	Sox2_MA0143.3	26	0	-	0	0	.
chr20	17467229	17467230	chr20:17467230:A:G	rs956347	A	G	A	Sox2_MA0143.3	-8	0	+	0	0	.
chr20	17542274	17542275	chr20:17542275:G:T	rs201931	G	T	T	Sox2_MA0143.3	1	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr20	17570781	17570782	chr20:17570782:C:T	rs2236249	C	T	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr20	17588853	17588854	chr20:17588854:A:G	rs4814627	A	G	G	Sox2_MA0143.3	4	1	-	9.206767037375712	2.2980122580604916	CCTTTGTC
chr20	17656087	17656088	chr20:17656088:G:C	rs12329608	G	C	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr20	17710444	17710445	chr20:17710445:C:T	rs35792437	C	T	C	Sox2_MA0143.3	26	0	-	0	0	.
chr20	17750621	17750622	chr20:17750622:G:C	rs6131995	G	C	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr20	17750640	17750641	chr20:17750641:C:A	rs74181980	C	A	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr20	17776082	17776083	chr20:17776083:T:G	rs2745832	T	G	T	Sox2_MA0143.3	2	1	-	8.676919043985553	2.5582713367092715	CCATTGTG
chr20	17783808	17783809	chr20:17783809:C:G	rs13037998	C	G	G	Sox2_MA0143.3	19	0	-	0	0	.
chr20	17783827	17783828	chr20:17783828:G:T	rs4560197	G	T	G	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr20	17808555	17808556	chr20:17808556:T:C	rs7265687	T	C	C	Sox2_MA0143.3	4	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr20	17808567	17808568	chr20:17808568:G:A	rs115844227	G	A	G	Sox2_MA0143.3	16	0	+	0	0	.
chr20	17808575	17808576	chr20:17808576:T:C	rs2143544	T	C	C	Sox2_MA0143.3	24	0	+	0	0	.
chr20	17913038	17913039	chr20:17913039:C:T	rs75333627	C	T	T	Sox2_MA0143.3	15	0	+	0	0	.
chr20	17925845	17925846	chr20:17925846:T:C	rs74171655	T	C	T	Sox2_MA0143.3	-15	0	+	0	0	.
chr20	17928778	17928779	chr20:17928779:C:T	rs11696646	C	T	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr20	17965442	17965443	chr20:17965443:A:G	rs6111761	A	G	G	Sox2_MA0143.3	9	0	-	0	0	.
chr20	17972418	17972419	chr20:17972419:A:C	rs8121099	A	C	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr20	18001826	18001827	chr20:18001827:A:G	rs181072429	A	G	A	Sox2_MA0143.3	12	0	-	0	0	.
chr20	18034968	18034969	chr20:18034969:C:G	rs6045154	C	G	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr20	18139563	18139564	chr20:18139564:A:G	rs6045213	A	G	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr20	18144083	18144084	chr20:18144084:G:C	rs145943440	G	C	G	Sox2_MA0143.3	19	0	+	0	0	.
chr20	18192942	18192943	chr20:18192943:C:A	rs6105886	C	A	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr20	18221919	18221920	chr20:18221920:G:T	rs8126104	G	T	G	Sox2_MA0143.3	0	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr20	18436676	18436677	chr20:18436677:A:G	rs2424193	A	G	A	Sox2_MA0143.3	-4	0	-	0	0	.
chr20	18436863	18436864	chr20:18436864:A:G	rs6075341	A	G	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr20	18439649	18439650	chr20:18439650:C:T	rs55694441	C	T	C	Sox2_MA0143.3	22	0	-	0	0	.
chr20	18493921	18493922	chr20:18493922:C:G	rs17734238	C	G	.	Sox2_MA0143.3	9	0	-	0	0	.
chr20	18496697	18496698	chr20:18496698:T:C	chr20:18496698:T:C	T	C	T	Sox2_MA0143.3	12	0	+	0	0	.
chr20	18702718	18702719	chr20:18702719:A:G	rs6035105	A	G	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr20	18889259	18889260	chr20:18889260:G:A	rs6136555	G	A	G	Sox2_MA0143.3	22	0	-	0	0	.
chr20	18992524	18992525	chr20:18992525:A:C	rs6075447	A	C	c	Sox2_MA0143.3	-10	0	+	0	0	.
chr20	18992539	18992540	chr20:18992540:G:A	rs6136592	G	A	g	Sox2_MA0143.3	5	1	+	9.613475778572903	2.7047209992576837	CCATTGTT
chr20	18999200	18999201	chr20:18999201:G:A	rs73601869	G	A	G	Sox2_MA0143.3	23	0	-	0	0	.
chr20	18999212	18999213	chr20:18999213:A:T	rs77584231	A	T	A	Sox2_MA0143.3	11	0	-	0	0	.
chr20	19006348	19006349	chr20:19006349:T:A	rs2876505	T	A	A	Sox2_MA0143.3	-1	0	-	0	0	.
chr20	19006509	19006510	chr20:19006510:T:C	rs6035189	T	C	C	Sox2_MA0143.3	14	0	-	0	0	.
chr20	19015480	19015481	chr20:19015481:C:T	rs8119947	C	T	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr20	19015483	19015484	chr20:19015484:G:A	rs11698294	G	A	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr20	19075235	19075236	chr20:19075236:C:A	rs772385618	C	A	C	Sox2_MA0143.3	21	0	+	0	0	.
chr20	19075526	19075527	chr20:19075527:C:T	rs73603599	C	T	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr20	19075570	19075571	chr20:19075571:C:T	rs116563020	C	T	C	Sox2_MA0143.3	25	0	+	0	0	.
chr20	19211034	19211035	chr20:19211035:T:G	rs4141981	T	G	T	Sox2_MA0143.3	-19	0	-	0	0	.
chr20	19268281	19268282	chr20:19268282:C:T	rs75107372	C	T	C	Sox2_MA0143.3	12	0	+	0	0	.
chr20	19363236	19363237	chr20:19363237:C:T	rs74837560	C	T	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr20	19411901	19411902	chr20:19411902:A:G	rs143845869	A	G	A	Sox2_MA0143.3	16	0	+	0	0	.
chr20	19465688	19465689	chr20:19465689:G:T	rs77955724	G	T	G	Sox2_MA0143.3	-5	0	+	0	0	.
chr20	19675346	19675347	chr20:19675347:T:A	rs3790287	T	A	T	Sox2_MA0143.3	-20	0	-	0	0	.
chr20	19737442	19737443	chr20:19737443:G:A	rs808689	G	A	A	Sox2_MA0143.3	-8	0	+	0	0	.
chr20	19748705	19748706	chr20:19748706:A:G	rs808707	A	G	A	Sox2_MA0143.3	15	0	-	0	0	.
chr20	19748721	19748722	chr20:19748722:G:A	rs808708	G	A	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr20	19784615	19784616	chr20:19784616:G:A	rs530382110	G	A	G	Sox2_MA0143.3	22	0	+	0	0	.
chr20	19886488	19886489	chr20:19886489:C:T	rs59276130	C	T	C	Sox2_MA0143.3	14	0	+	0	0	.
chr20	19887756	19887757	chr20:19887757:G:A	rs36065585	G	A	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr20	19935707	19935708	chr20:19935708:G:A	rs2424250	G	A	A	Sox2_MA0143.3	-5	0	-	0	0	.
chr20	19935716	19935717	chr20:19935717:T:G	rs760012349	T	G	T	Sox2_MA0143.3	-14	0	-	0	0	.
chr20	19952625	19952626	chr20:19952626:G:A	rs6106162	G	A	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr20	19976891	19976892	chr20:19976892:T:C	rs140617967	T	C	T	Sox2_MA0143.3	18	0	-	0	0	.
chr20	20300020	20300021	chr20:20300021:G:A	rs76437497	G	A	G	Sox2_MA0143.3	-16	0	-	0	0	.
chr20	20331693	20331694	chr20:20331694:T:C	rs6035607	T	C	T	Sox2_MA0143.3	-15	0	+	0	0	.
chr20	20331704	20331705	chr20:20331705:T:G	rs2424351	T	G	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr20	20364421	20364422	chr20:20364422:G:A	rs11908073	G	A	G	Sox2_MA0143.3	11	0	-	0	0	.
chr20	20367690	20367691	chr20:20367691:C:T	rs114684347	C	T	c	Sox2_MA0143.3	25	0	+	0	0	.
chr20	20408253	20408254	chr20:20408254:G:C	rs6035621	G	C	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr20	20442789	20442790	chr20:20442790:C:T	rs183853586	C	T	T	Sox2_MA0143.3	-15	0	-	0	0	.
chr20	20519412	20519413	chr20:20519413:A:C	rs906594747	A	C	A	Sox2_MA0143.3	15	0	+	0	0	.
chr20	20731817	20731818	chr20:20731818:C:T	rs141144318	C	T	C	Sox2_MA0143.3	1	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr20	20823469	20823470	chr20:20823470:G:A	rs111753014	G	A	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr20	20849968	20849969	chr20:20849969:T:C	rs1326395	T	C	T	Sox2_MA0143.3	10	0	+	0	0	.
chr20	21006869	21006870	chr20:21006870:T:C	rs6082278	T	C	T	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr20	21189948	21189949	chr20:21189949:G:T	rs1444424287	G	T	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr20	21202428	21202429	chr20:21202429:A:G	rs781709893	A	G	A	Sox2_MA0143.3	-15	0	-	0	0	.
chr20	21240665	21240666	chr20:21240666:A:G	rs6035817	A	G	G	Sox2_MA0143.3	3	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr20	21554778	21554779	chr20:21554779:A:G	rs73129824	A	G	A	Sox2_MA0143.3	4	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr20	21827170	21827171	chr20:21827171:G:A	rs145333591	G	A	G	Sox2_MA0143.3	-9	0	+	0	0	.
chr20	22372013	22372014	chr20:22372014:G:T	rs116960385	G	T	G	Sox2_MA0143.3	21	0	-	0	0	.
chr20	22375513	22375514	chr20:22375514:G:A	rs199803	G	A	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr20	22533967	22533968	chr20:22533968:G:A	rs6048168	G	A	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr20	22533982	22533983	chr20:22533983:C:T	rs6048169	C	T	C	Sox2_MA0143.3	8	0	+	0	0	.
chr20	22691913	22691914	chr20:22691914:G:A	rs6137727	G	A	A	Sox2_MA0143.3	-3	0	-	0	0	.
chr20	22728130	22728131	chr20:22728131:G:A	rs4999222	G	A	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr20	22762660	22762661	chr20:22762661:C:T	rs4815142	C	T	C	Sox2_MA0143.3	25	0	-	0	0	.
chr20	22770783	22770784	chr20:22770784:C:T	rs2143902	C	T	C	Sox2_MA0143.3	9	0	+	0	0	.
chr20	22810165	22810166	chr20:22810166:C:T	rs74741501	C	T	C	Sox2_MA0143.3	13	0	-	0	0	.
chr20	22890856	22890857	chr20:22890857:A:C	rs139167119	A	C	A	Sox2_MA0143.3	16	0	+	0	0	.
chr20	22909664	22909665	chr20:22909665:G:A	rs4815156	G	A	A	Sox2_MA0143.3	10	0	+	0	0	.
chr20	23015005	23015006	chr20:23015006:C:T	rs6082975	C	T	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr20	23025640	23025641	chr20:23025641:G:A	rs2092634	G	A	G	Sox2_MA0143.3	8	0	-	0	0	.
chr20	23030830	23030831	chr20:23030831:A:G	rs11696134	A	G	G	Sox2_MA0143.3	-11	0	+	0	0	.
chr20	23060943	23060944	chr20:23060944:T:C	rs73309897	T	C	T	Sox2_MA0143.3	-2	0	+	0	0	.
chr20	23063720	23063721	chr20:23063721:A:G	rs6048526	A	G	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr20	23065076	23065077	chr20:23065077:G:T	rs16984890	G	T	G	Sox2_MA0143.3	-3	0	+	0	0	.
chr20	23097219	23097220	chr20:23097220:T:C	rs844811	T	C	C	Sox2_MA0143.3	2	1	-	8.676919043985553	2.5582713367092715	CCATTGTG
chr20	23102890	23102891	chr20:23102891:C:T	rs6137826	C	T	C	Sox2_MA0143.3	15	0	-	0	0	.
chr20	23109303	23109304	chr20:23109304:C:A	rs75751821	C	A	C	Sox2_MA0143.3	12	0	+	0	0	.
chr20	23135717	23135718	chr20:23135718:T:G	rs55903421	T	G	T	Sox2_MA0143.3	-20	0	+	0	0	.
chr20	23147023	23147024	chr20:23147024:G:A	rs6132569	G	A	G	Sox2_MA0143.3	23	0	+	0	0	.
chr20	23178981	23178982	chr20:23178982:T:C	rs1572710	T	C	T	Sox2_MA0143.3	2	1	-	9.613475778572903	3.494828071296623	CCATTGTT
chr20	23225277	23225278	chr20:23225278:C:T	rs7272365	C	T	C	Sox2_MA0143.3	16	0	-	0	0	.
chr20	23225632	23225633	chr20:23225633:A:G	rs148596161	A	G	C	Sox2_MA0143.3	14	0	-	0	0	.
chr20	23232019	23232020	chr20:23232020:C:G	rs181000687	C	G	C	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr20	23258723	23258724	chr20:23258724:G:T	rs10485643	G	T	G	Sox2_MA0143.3	19	0	+	0	0	.
chr20	23283407	23283408	chr20:23283408:A:G	rs6036361	A	G	G	Sox2_MA0143.3	3	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr20	23351111	23351112	chr20:23351112:T:C	chr20:23351112:T:C	T	C	T	Sox2_MA0143.3	-16	0	+	0	0	.
chr20	23351122	23351123	chr20:23351123:C:T	rs57205142	C	T	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr20	23351165	23351166	chr20:23351166:C:T	rs1024297644	C	T	C	Sox2_MA0143.3	10	0	+	0	0	.
chr20	23391875	23391876	chr20:23391876:A:G	rs6137927	A	G	A	Sox2_MA0143.3	-11	0	-	0	0	.
chr20	23446737	23446738	chr20:23446738:C:G	rs79594720	C	G	C	Sox2_MA0143.3	9	0	-	0	0	.
chr20	23446761	23446762	chr20:23446762:A:G	rs1076776	A	G	A	Sox2_MA0143.3	-15	0	-	0	0	.
chr20	23496129	23496130	chr20:23496130:A:G	rs2983291	A	G	A	Sox2_MA0143.3	15	0	+	0	0	.
chr20	23508734	23508735	chr20:23508735:T:C	rs6048844	T	C	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr20	23508915	23508916	chr20:23508916:G:A	rs6036436	G	A	g	Sox2_MA0143.3	-7	0	+	0	0	.
chr20	23536922	23536923	chr20:23536923:G:C	rs41304816	G	C	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr20	23607489	23607490	chr20:23607490:C:T	rs13043266	C	T	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr20	23629624	23629625	chr20:23629625:C:T	rs13038305	C	T	C	Sox2_MA0143.3	7	1	-	8.864090315184848	3.5547341015215945	CCTTTGTG
chr20	23684554	23684555	chr20:23684555:G:A	rs76782803	G	A	G	Sox2_MA0143.3	19	0	+	0	0	.
chr20	23690711	23690712	chr20:23690712:C:T	rs113609445	C	T	C	Sox2_MA0143.3	21	0	+	0	0	.
chr20	23746487	23746488	chr20:23746488:T:C	rs6049063	T	C	t	Sox2_MA0143.3	27	0	+	0	0	.
chr20	23832980	23832981	chr20:23832981:G:A	rs8184710	G	A	G	Sox2_MA0143.3	25	0	-	0	0	.
chr20	23835878	23835879	chr20:23835879:A:G	rs6076138	A	G	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr20	23876025	23876026	chr20:23876026:T:C	rs4813509	T	C	C	Sox2_MA0143.3	18	0	-	0	0	.
chr20	23947943	23947944	chr20:23947944:T:C	rs116162831	T	C	T	Sox2_MA0143.3	6	1	+	8.676919043985553	1.7681642646703326	CCATTGTG
chr20	23957686	23957687	chr20:23957687:C:T	rs2145969	C	T	T	Sox2_MA0143.3	9	0	+	0	0	.
chr20	23973912	23973913	chr20:23973913:T:C	rs6049276	T	C	T	Sox2_MA0143.3	-8	0	-	0	0	.
chr20	23989406	23989407	chr20:23989407:G:T	rs59100765	G	T	g	Sox2_MA0143.3	-3	0	-	0	0	.
chr20	24024620	24024621	chr20:24024621:C:T	rs6036615	C	T	T	Sox2_MA0143.3	-6	0	-	0	0	.
chr20	24024621	24024622	chr20:24024622:A:G	rs6036616	A	G	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr20	24096844	24096845	chr20:24096845:T:C	rs6049390	T	C	C	Sox2_MA0143.3	7	1	+	9.613475778572903	9.019595766176417	CCATTGTT
chr20	24109212	24109213	chr20:24109213:G:A	rs79315307	G	A	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr20	24152085	24152086	chr20:24152086:C:G	rs182092963	C	G	C	Sox2_MA0143.3	21	0	-	0	0	.
chr20	24373743	24373744	chr20:24373744:T:A	rs184156367	T	A	T	Sox2_MA0143.3	-10	0	-	0	0	.
chr20	24406510	24406511	chr20:24406511:C:T	rs34808015	C	T	T	Sox2_MA0143.3	27	0	+	0	0	.
chr20	24440366	24440367	chr20:24440367:A:C	rs2206644	A	C	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr20	24565606	24565607	chr20:24565607:A:G	rs1980823	A	G	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr20	24576160	24576161	chr20:24576161:T:C	rs17250061	T	C	T	Sox2_MA0143.3	17	0	-	0	0	.
chr20	24583680	24583681	chr20:24583681:G:A	rs6138332	G	A	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr20	24665953	24665954	chr20:24665954:G:C	rs141129007	G	C	C	Sox2_MA0143.3	14	0	+	0	0	.
chr20	24681032	24681033	chr20:24681033:C:T	rs73106703	C	T	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr20	24682065	24682066	chr20:24682066:G:C	rs6114821	G	C	G	Sox2_MA0143.3	20	0	+	0	0	.
chr20	24682066	24682067	chr20:24682067:C:A	rs6106923	C	A	C	Sox2_MA0143.3	21	0	+	0	0	.
chr20	24682100	24682101	chr20:24682101:T:C	rs6083579	T	C	T	Sox2_MA0143.3	-3	0	+	0	0	.
chr20	24682123	24682124	chr20:24682124:C:G	rs12626171	C	G	C	Sox2_MA0143.3	20	0	+	0	0	.
chr20	24682124	24682125	chr20:24682125:A:C	rs12626161	A	C	A	Sox2_MA0143.3	21	0	+	0	0	.
chr20	24696343	24696344	chr20:24696344:G:A	rs112270330	G	A	G	Sox2_MA0143.3	20	0	-	0	0	.
chr20	24702410	24702411	chr20:24702411:C:G	rs73106770	C	G	C	Sox2_MA0143.3	12	0	-	0	0	.
chr20	24722371	24722372	chr20:24722372:T:G	rs8117631	T	G	T	Sox2_MA0143.3	13	0	+	0	0	.
chr20	24722385	24722386	chr20:24722386:G:A	rs35449981	G	A	G	Sox2_MA0143.3	27	0	+	0	0	.
chr20	24723424	24723425	chr20:24723425:A:G	rs114410117	A	G	A	Sox2_MA0143.3	24	0	+	0	0	.
chr20	24736728	24736729	chr20:24736729:C:T	rs7260865	C	T	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr20	24794910	24794911	chr20:24794911:A:G	rs85804	A	G	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr20	24883077	24883078	chr20:24883078:C:T	rs6083659	C	T	C	Sox2_MA0143.3	24	0	+	0	0	.
chr20	24897169	24897170	chr20:24897170:T:C	rs6050099	T	C	T	Sox2_MA0143.3	25	0	+	0	0	.
chr20	24934863	24934864	chr20:24934864:A:G	rs6036986	A	G	a	Sox2_MA0143.3	-11	0	+	0	0	.
chr20	25085096	25085097	chr20:25085097:C:G	rs4815369	C	G	G	Sox2_MA0143.3	23	0	-	0	0	.
chr20	25241926	25241927	chr20:25241927:C:T	rs6132820	C	T	c	Sox2_MA0143.3	-20	0	+	0	0	.
chr20	25343773	25343774	chr20:25343774:A:G	rs8125868	A	G	G	Sox2_MA0143.3	7	1	-	9.800647049772198	9.206767037375712	CCTTTGTT
chr20	25501320	25501321	chr20:25501321:C:G	rs117226672	C	G	C	Sox2_MA0143.3	8	0	-	0	0	.
chr20	25502979	25502980	chr20:25502980:A:G	rs374701	A	G	G	Sox2_MA0143.3	14	0	-	0	0	.
chr20	25512428	25512429	chr20:25512429:T:G	rs56243008	T	G	T	Sox2_MA0143.3	-12	0	-	0	0	.
chr20	25514598	25514599	chr20:25514599:A:G	rs447808	A	G	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr20	25525945	25525946	chr20:25525946:T:C	rs402120	T	C	C	Sox2_MA0143.3	4	1	+	9.800647049772198	2.8918922704569785	CCTTTGTT
chr20	25579784	25579785	chr20:25579785:A:C	rs73337394	A	C	C	Sox2_MA0143.3	4	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr20	25579807	25579808	chr20:25579808:C:T	rs1888037	C	T	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr20	25694965	25694966	chr20:25694966:T:C	rs4815445	T	C	C	Sox2_MA0143.3	19	0	+	0	0	.
chr20	25719672	25719673	chr20:25719673:T:C	rs4815450	T	C	C	Sox2_MA0143.3	3	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr20	25855652	25855653	chr20:25855653:C:T	rs6037250	C	T	.	Sox2_MA0143.3	25	0	+	0	0	.
chr20	25868867	25868868	chr20:25868868:C:T	rs2096281	C	T	.	Sox2_MA0143.3	-1	0	-	0	0	.
chr20	25979370	25979371	chr20:25979371:T:C	rs4813596	T	C	.	Sox2_MA0143.3	-6	0	-	0	0	.
chr20	25984502	25984503	chr20:25984503:A:G	rs6107121	A	G	.	Sox2_MA0143.3	17	0	+	0	0	.
chr20	25987506	25987507	chr20:25987507:T:G	rs34982694	T	G	.	Sox2_MA0143.3	-4	0	-	0	0	.
chr20	25987514	25987515	chr20:25987515:C:G	rs536267546	C	G	.	Sox2_MA0143.3	-12	0	-	0	0	.
chr20	25990348	25990349	chr20:25990349:T:C	rs61091356	T	C	.	Sox2_MA0143.3	20	0	+	0	0	.
chr20	26372433	26372434	chr20:26372434:T:C	chr20:26372434:T:C	T	C	.	Sox2_MA0143.3	27	0	+	0	0	.
chr20	28730409	28730410	chr20:28730410:G:T	rs1254426658	G	T	.	Sox2_MA0143.3	-16	0	-	0	0	.
chr20	28841458	28841459	chr20:28841459:A:T	rs1275745909	A	T	.	Sox2_MA0143.3	-1	0	+	0	0	.
chr20	28871610	28871611	chr20:28871611:G:T	rs879137094	G	T	.	Sox2_MA0143.3	-20	0	-	0	0	.
chr20	28872289	28872290	chr20:28872290:T:C	rs1472301048	T	C	.	Sox2_MA0143.3	-15	0	-	0	0	.
chr20	29114410	29114411	chr20:29114411:C:T	rs1420627233	C	T	.	Sox2_MA0143.3	7	1	+	9.206767037375712	9.800647049772198	CCTTTGTC
chr20	29206037	29206038	chr20:29206038:A:G	rs879248423	A	G	.	Sox2_MA0143.3	12	0	+	0	0	.
chr20	29298214	29298215	chr20:29298215:A:G	rs1397475067	A	G	.	Sox2_MA0143.3	-11	0	-	0	0	.
chr20	29298223	29298224	chr20:29298224:C:A	rs1253909476	C	A	.	Sox2_MA0143.3	-20	0	-	0	0	.
chr20	29303624	29303625	chr20:29303625:T:C	chr20:29303625:T:C	T	C	.	Sox2_MA0143.3	-13	0	+	0	0	.
chr20	29303624	29303625	chr20:29303625:T:G	rs1479426704	T	G	.	Sox2_MA0143.3	-13	0	+	0	0	.
chr20	29303662	29303663	chr20:29303663:C:G	rs1288626352	C	G	.	Sox2_MA0143.3	25	0	+	0	0	.
chr20	29327507	29327508	chr20:29327508:T:C	rs1367021219	T	C	.	Sox2_MA0143.3	25	0	+	0	0	.
chr20	29350130	29350131	chr20:29350131:G:A	rs1258661078	G	A	.	Sox2_MA0143.3	-13	0	+	0	0	.
chr20	29408424	29408425	chr20:29408425:G:T	rs1486282637	G	T	.	Sox2_MA0143.3	-11	0	-	0	0	.
chr20	29408864	29408865	chr20:29408865:G:T	rs1372933687	G	T	.	Sox2_MA0143.3	-7	0	+	0	0	.
chr20	29471866	29471867	chr20:29471867:C:T	rs36194988	C	T	.	Sox2_MA0143.3	-19	0	-	0	0	.
chr20	29876511	29876512	chr20:29876512:G:A	rs1460358818	G	A	.	Sox2_MA0143.3	-7	0	+	0	0	.
chr20	30167882	30167883	chr20:30167883:T:C	rs1474259122	T	C	.	Sox2_MA0143.3	25	0	-	0	0	.
chr20	30281112	30281113	chr20:30281113:A:G	rs66625798	A	G	.	Sox2_MA0143.3	17	0	+	0	0	.
chr20	30285080	30285081	chr20:30285081:C:A	rs6057242	C	A	.	Sox2_MA0143.3	-1	0	+	0	0	.
chr20	30336407	30336408	chr20:30336408:C:T	rs150554510	C	T	.	Sox2_MA0143.3	14	0	-	0	0	.
chr20	30347576	30347577	chr20:30347577:G:T	rs148372330	G	T	.	Sox2_MA0143.3	-1	0	-	0	0	.
chr20	30486312	30486313	chr20:30486313:C:A	chr20:30486313:C:A	C	A	.	Sox2_MA0143.3	-11	0	-	0	0	.
chr20	30813192	30813193	chr20:30813193:C:T	rs1443176494	C	T	.	Sox2_MA0143.3	12	0	-	0	0	.
chr20	30813200	30813201	chr20:30813201:A:T	chr20:30813201:A:T	A	T	.	Sox2_MA0143.3	4	1	-	9.206767037375712	2.2980122580604916	CCTTTGTC
chr20	30813203	30813204	chr20:30813204:G:A	rs1354207808	G	A	.	Sox2_MA0143.3	1	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr20	30813208	30813209	chr20:30813209:T:C	rs1326919626	T	C	.	Sox2_MA0143.3	-4	0	-	0	0	.
chr20	30815509	30815510	chr20:30815510:T:G	rs1225581655	T	G	.	Sox2_MA0143.3	-10	0	+	0	0	.
chr20	30846849	30846850	chr20:30846850:A:G	rs1382815593	A	G	.	Sox2_MA0143.3	27	0	+	0	0	.
chr20	30912817	30912818	chr20:30912818:G:A	rs1431621656	G	A	.	Sox2_MA0143.3	20	0	-	0	0	.
chr20	31062027	31062028	chr20:31062028:T:C	chr20:31062028:T:C	T	C	.	Sox2_MA0143.3	12	0	-	0	0	.
chr20	31062033	31062034	chr20:31062034:A:G	rs1264175895	A	G	.	Sox2_MA0143.3	6	1	-	9.613475778572903	2.7047209992576837	CCATTGTT
chr20	31062122	31062123	chr20:31062123:T:A	rs1218100437	T	A	.	Sox2_MA0143.3	-3	0	-	0	0	.
chr20	31535463	31535464	chr20:31535464:A:G	rs7271374	A	G	A	Sox2_MA0143.3	2	1	-	8.864090315184848	2.5582713367092715	CCTTTGTG
chr20	31603140	31603141	chr20:31603141:G:A	rs6060249	G	A	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr20	31671010	31671011	chr20:31671011:T:C	rs10439608	T	C	C	Sox2_MA0143.3	25	0	-	0	0	.
chr20	31712418	31712419	chr20:31712419:A:G	rs6060857	A	G	A	Sox2_MA0143.3	22	0	-	0	0	.
chr20	31841354	31841355	chr20:31841355:T:C	rs17093661	T	C	C	Sox2_MA0143.3	22	0	-	0	0	.
chr20	31860142	31860143	chr20:31860143:G:A	rs79322987	G	A	G	Sox2_MA0143.3	8	0	-	0	0	.
chr20	31935659	31935660	chr20:31935660:G:A	rs77701891	G	A	G	Sox2_MA0143.3	22	0	+	0	0	.
chr20	32035736	32035737	chr20:32035737:A:G	rs6121319	A	G	A	Sox2_MA0143.3	-20	0	+	0	0	.
chr20	32155492	32155493	chr20:32155493:G:C	chr20:32155493:G:C	G	C	G	Sox2_MA0143.3	22	0	+	0	0	.
chr20	32207719	32207720	chr20:32207720:T:G	rs1205296727	T	G	T	Sox2_MA0143.3	-5	0	+	0	0	.
chr20	32216731	32216732	chr20:32216732:G:C	rs139014980	G	C	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr20	32249498	32249499	chr20:32249499:C:T	rs114055327	C	T	C	Sox2_MA0143.3	26	0	+	0	0	.
chr20	32510073	32510074	chr20:32510074:T:C	rs293566	T	C	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr20	32537073	32537074	chr20:32537074:G:A	rs563080548	G	A	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr20	32537109	32537110	chr20:32537110:C:T	chr20:32537110:C:T	C	T	C	Sox2_MA0143.3	23	0	+	0	0	.
chr20	32564752	32564753	chr20:32564753:G:A	rs17123396	G	A	G	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr20	32577215	32577216	chr20:32577216:G:A	rs911526	G	A	A	Sox2_MA0143.3	5	1	+	8.676919043985553	1.7681642646703324	CCATTGTG
chr20	32581802	32581803	chr20:32581803:G:T	rs116974108	G	T	G	Sox2_MA0143.3	1	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr20	32624110	32624111	chr20:32624111:C:T	rs73107842	C	T	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr20	32713445	32713446	chr20:32713446:C:T	rs28523897	C	T	T	Sox2_MA0143.3	-17	0	-	0	0	.
chr20	32764090	32764091	chr20:32764091:T:C	rs59507494	T	C	T	Sox2_MA0143.3	4	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr20	32790160	32790161	chr20:32790161:T:C	rs143163007	T	C	T	Sox2_MA0143.3	-17	0	+	0	0	.
chr20	32791858	32791859	chr20:32791859:C:T	rs910084	C	T	C	Sox2_MA0143.3	22	0	-	0	0	.
chr20	32891639	32891640	chr20:32891640:G:A	rs34524376	G	A	G	Sox2_MA0143.3	-2	0	+	0	0	.
chr20	32963754	32963755	chr20:32963755:C:T	rs146734465	C	T	c	Sox2_MA0143.3	11	0	+	0	0	.
chr20	32988214	32988215	chr20:32988215:G:A	rs144772132	G	A	G	Sox2_MA0143.3	-9	0	+	0	0	.
chr20	33130862	33130863	chr20:33130863:C:T	rs145001879	C	T	C	Sox2_MA0143.3	17	0	-	0	0	.
chr20	33148303	33148304	chr20:33148304:C:G	rs6120122	C	G	C	Sox2_MA0143.3	1	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr20	33356474	33356475	chr20:33356475:T:C	rs557464599	T	C	T	Sox2_MA0143.3	2	1	-	8.676919043985553	2.5582713367092715	CCATTGTG
chr20	33416137	33416138	chr20:33416138:C:T	rs6088214	C	T	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr20	33589272	33589273	chr20:33589273:T:C	rs6120316	T	C	T	Sox2_MA0143.3	-17	0	+	0	0	.
chr20	33602954	33602955	chr20:33602955:G:A	rs73119184	G	A	G	Sox2_MA0143.3	24	0	-	0	0	.
chr20	33649747	33649748	chr20:33649748:C:T	rs550329392	C	T	C	Sox2_MA0143.3	13	0	-	0	0	.
chr20	33654826	33654827	chr20:33654827:T:C	rs911144	T	C	T	Sox2_MA0143.3	2	1	-	8.676919043985553	2.5582713367092715	CCATTGTG
chr20	33790753	33790754	chr20:33790754:G:A	rs2747564	G	A	G	Sox2_MA0143.3	19	0	-	0	0	.
chr20	33914593	33914594	chr20:33914594:C:G	rs62209645	C	G	C	Sox2_MA0143.3	17	0	+	0	0	.
chr20	33915935	33915936	chr20:33915936:G:A	chr20:33915936:G:A	G	A	G	Sox2_MA0143.3	10	0	+	0	0	.
chr20	33926579	33926580	chr20:33926580:C:T	rs6142047	C	T	C	Sox2_MA0143.3	11	0	+	0	0	.
chr20	34122903	34122904	chr20:34122904:G:A	rs4911409	G	A	G	Sox2_MA0143.3	11	0	+	0	0	.
chr20	34165000	34165001	chr20:34165001:T:C	rs6120548	T	C	T	Sox2_MA0143.3	-13	0	-	0	0	.
chr20	34255073	34255074	chr20:34255074:C:T	rs80149300	C	T	C	Sox2_MA0143.3	24	0	+	0	0	.
chr20	34301794	34301795	chr20:34301795:C:T	rs114745639	C	T	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr20	35115803	35115804	chr20:35115804:C:T	rs3746429	C	T	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr20	35166359	35166360	chr20:35166360:G:C	rs1389514811	G	C	G	Sox2_MA0143.3	5	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr20	35263228	35263229	chr20:35263229:G:C	rs73105297	G	C	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr20	35303200	35303201	chr20:35303201:G:A	rs3764732	G	A	G	Sox2_MA0143.3	-16	0	-	0	0	.
chr20	35408629	35408630	chr20:35408630:T:C	rs6087703	T	C	T	Sox2_MA0143.3	-2	0	-	0	0	.
chr20	35559008	35559009	chr20:35559009:T:C	rs8120157	T	C	T	Sox2_MA0143.3	-1	0	-	0	0	.
chr20	35559015	35559016	chr20:35559016:C:T	rs769228913	C	T	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr20	35664279	35664280	chr20:35664280:C:T	rs190053105	C	T	C	Sox2_MA0143.3	25	0	-	0	0	.
chr20	35664648	35664649	chr20:35664649:G:C	rs547113795	G	C	G	Sox2_MA0143.3	10	0	+	0	0	.
chr20	35735875	35735876	chr20:35735876:T:C	rs11906171	T	C	T	Sox2_MA0143.3	14	0	-	0	0	.
chr20	35769290	35769291	chr20:35769291:G:A	rs930571057	G	A	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr20	35934137	35934138	chr20:35934138:C:T	rs6060696	C	T	T	Sox2_MA0143.3	13	0	+	0	0	.
chr20	35951978	35951979	chr20:35951979:A:G	rs115590419	A	G	A	Sox2_MA0143.3	17	0	+	0	0	.
chr20	36018992	36018993	chr20:36018993:A:G	rs6060755	A	G	A	Sox2_MA0143.3	-17	0	+	0	0	.
chr20	36408040	36408041	chr20:36408041:A:G	rs4603833	A	G	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr20	36538682	36538683	chr20:36538683:A:G	rs57900015	A	G	G	Sox2_MA0143.3	25	0	-	0	0	.
chr20	36543125	36543126	chr20:36543126:T:A	rs78736363	T	A	T	Sox2_MA0143.3	13	0	-	0	0	.
chr20	36574257	36574258	chr20:36574258:C:T	rs185814553	C	T	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr20	36592409	36592410	chr20:36592410:G:A	rs6101373	G	A	A	Sox2_MA0143.3	-9	0	+	0	0	.
chr20	36733735	36733736	chr20:36733736:C:T	rs6101995	C	T	C	Sox2_MA0143.3	15	0	-	0	0	.
chr20	36836822	36836823	chr20:36836823:T:C	rs187366352	T	C	T	Sox2_MA0143.3	-18	0	+	0	0	.
chr20	36836833	36836834	chr20:36836834:T:C	rs191906463	T	C	T	Sox2_MA0143.3	-7	0	+	0	0	.
chr20	36854472	36854473	chr20:36854473:G:T	rs142423161	G	T	G	Sox2_MA0143.3	17	0	-	0	0	.
chr20	36896958	36896959	chr20:36896959:A:G	rs1291142	A	G	A	Sox2_MA0143.3	22	0	+	0	0	.
chr20	36958167	36958168	chr20:36958168:T:A	rs6103006	T	A	A	Sox2_MA0143.3	-17	0	-	0	0	.
chr20	37192697	37192698	chr20:37192698:T:C	rs11698554	T	C	T	Sox2_MA0143.3	22	0	-	0	0	.
chr20	37192709	37192710	chr20:37192710:T:C	rs112415560	T	C	T	Sox2_MA0143.3	10	0	-	0	0	.
chr20	37195693	37195694	chr20:37195694:G:A	rs79088585	G	A	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr20	37237587	37237588	chr20:37237588:G:A	rs1016163	G	A	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr20	37243689	37243690	chr20:37243690:T:C	rs1001351	T	C	T	Sox2_MA0143.3	-2	0	-	0	0	.
chr20	37315150	37315151	chr20:37315151:A:G	rs6094271	A	G	A	Sox2_MA0143.3	-16	0	+	0	0	.
chr20	37316834	37316835	chr20:37316835:C:G	rs1043415	C	G	G	Sox2_MA0143.3	-12	0	+	0	0	.
chr20	37352357	37352358	chr20:37352358:C:G	rs6017962	C	G	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr20	37352924	37352925	chr20:37352925:C:T	rs1547837	C	T	C	Sox2_MA0143.3	18	0	+	0	0	.
chr20	37409070	37409071	chr20:37409071:G:A	rs6018348	G	A	.	Sox2_MA0143.3	11	0	+	0	0	.
chr20	37411457	37411458	chr20:37411458:G:A	rs186601808	G	A	.	Sox2_MA0143.3	5	1	+	9.206767037375712	2.298012258060492	CCTTTGTC
chr20	37413042	37413043	chr20:37413043:C:G	rs73299338	C	G	.	Sox2_MA0143.3	8	0	+	0	0	.
chr20	37469970	37469971	chr20:37469971:T:C	rs35184878	T	C	T	Sox2_MA0143.3	8	0	+	0	0	.
chr20	37572991	37572992	chr20:37572992:C:G	rs6019476	C	G	G	Sox2_MA0143.3	15	0	+	0	0	.
chr20	37590749	37590750	chr20:37590750:A:G	rs6066956	A	G	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr20	37939766	37939767	chr20:37939767:C:T	rs375467186	C	T	C	Sox2_MA0143.3	17	0	+	0	0	.
chr20	38054075	38054076	chr20:38054076:G:A	rs6068623	G	A	G	Sox2_MA0143.3	-16	0	-	0	0	.
chr20	38063118	38063119	chr20:38063119:T:A	rs143733384	T	A	T	Sox2_MA0143.3	9	0	+	0	0	.
chr20	38063178	38063179	chr20:38063179:C:T	rs6068657	C	T	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr20	38064463	38064464	chr20:38064464:C:T	rs143947653	C	T	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr20	38110587	38110588	chr20:38110588:T:C	rs6023069	T	C	C	Sox2_MA0143.3	15	0	-	0	0	.
chr20	38139583	38139584	chr20:38139584:C:T	rs2229470	C	T	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr20	38144642	38144643	chr20:38144643:T:A	rs45554738	T	A	T	Sox2_MA0143.3	17	0	+	0	0	.
chr20	38158584	38158585	chr20:38158585:A:G	rs2284882	A	G	A	Sox2_MA0143.3	26	0	+	0	0	.
chr20	38170609	38170610	chr20:38170610:C:T	rs13045359	C	T	T	Sox2_MA0143.3	17	0	-	0	0	.
chr20	38170617	38170618	chr20:38170618:A:T	rs13045958	A	T	T	Sox2_MA0143.3	9	0	-	0	0	.
chr20	38173914	38173915	chr20:38173915:T:C	rs573473449	T	C	T	Sox2_MA0143.3	-17	0	+	0	0	.
chr20	38173926	38173927	chr20:38173927:C:T	rs75319666	C	T	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr20	38173943	38173944	chr20:38173944:T:C	rs6023676	T	C	C	Sox2_MA0143.3	12	0	+	0	0	.
chr20	38216553	38216554	chr20:38216554:C:T	rs12480600	C	T	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr20	38226846	38226847	chr20:38226847:G:A	rs2179429	G	A	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr20	38249633	38249634	chr20:38249634:C:T	rs1046769799	C	T	C	Sox2_MA0143.3	22	0	+	0	0	.
chr20	38253813	38253814	chr20:38253814:G:T	rs3994	G	T	g	Sox2_MA0143.3	-8	0	+	0	0	.
chr20	38355269	38355270	chr20:38355270:C:G	rs2232590	C	G	C	Sox2_MA0143.3	19	0	+	0	0	.
chr20	38452184	38452185	chr20:38452185:C:T	rs17685602	C	T	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr20	38613186	38613187	chr20:38613187:G:A	rs13038820	G	A	G	Sox2_MA0143.3	25	0	+	0	0	.
chr20	38631701	38631702	chr20:38631702:A:G	rs1037748063	A	G	A	Sox2_MA0143.3	-3	0	-	0	0	.
chr20	38654330	38654331	chr20:38654331:A:G	rs6070933	A	G	A	Sox2_MA0143.3	-17	0	-	0	0	.
chr20	38694539	38694540	chr20:38694540:C:T	rs6027331	C	T	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr20	38725626	38725627	chr20:38725627:C:A	rs115218183	C	A	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr20	38750438	38750439	chr20:38750439:G:A	rs62202464	G	A	g	Sox2_MA0143.3	19	0	+	0	0	.
chr20	38889908	38889909	chr20:38889909:G:A	rs2294557	G	A	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr20	38889921	38889922	chr20:38889922:A:G	rs909866	A	G	A	Sox2_MA0143.3	9	0	+	0	0	.
chr20	38922291	38922292	chr20:38922292:G:A	rs10392	G	A	G	Sox2_MA0143.3	7	1	+	8.676919043985553	3.3675628303222993	CCATTGTG
chr20	39091044	39091045	chr20:39091045:A:G	rs115203377	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr20	39214125	39214126	chr20:39214126:G:T	rs4812364	G	T	A	Sox2_MA0143.3	27	0	-	0	0	.
chr20	39312319	39312320	chr20:39312320:C:T	rs118107149	C	T	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr20	39329971	39329972	chr20:39329972:G:A	rs932553	G	A	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr20	39607409	39607410	chr20:39607410:A:G	rs57756096	A	G	A	Sox2_MA0143.3	2	1	+	9.613475778572903	3.494828071296623	CCATTGTT
chr20	39638920	39638921	chr20:39638921:T:C	rs294414	T	C	T	Sox2_MA0143.3	-9	0	+	0	0	.
chr20	39638952	39638953	chr20:39638953:G:A	rs6101636	G	A	G	Sox2_MA0143.3	23	0	+	0	0	.
chr20	39676954	39676955	chr20:39676955:C:T	rs744785	C	T	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr20	39825933	39825934	chr20:39825934:A:C	rs17801258	A	C	A	Sox2_MA0143.3	15	0	-	0	0	.
chr20	39851318	39851319	chr20:39851319:A:G	rs12480556	A	G	A	Sox2_MA0143.3	-20	0	+	0	0	.
chr20	39851320	39851321	chr20:39851321:C:A	rs211831	C	A	A	Sox2_MA0143.3	-18	0	+	0	0	.
chr20	39862512	39862513	chr20:39862513:C:T	rs6071834	C	T	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr20	39874165	39874166	chr20:39874166:G:C	rs6071842	G	C	G	Sox2_MA0143.3	22	0	+	0	0	.
chr20	39910774	39910775	chr20:39910775:G:C	rs8125192	G	C	G	Sox2_MA0143.3	26	0	-	0	0	.
chr20	40253912	40253913	chr20:40253913:C:G	rs6028981	C	G	G	Sox2_MA0143.3	13	0	-	0	0	.
chr20	40263131	40263132	chr20:40263132:T:G	rs6016305	T	G	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr20	40266275	40266276	chr20:40266276:T:C	rs5009525	T	C	T	Sox2_MA0143.3	2	1	-	8.676919043985553	2.5582713367092715	CCATTGTG
chr20	40266282	40266283	chr20:40266283:G:A	chr20:40266283:G:A	G	A	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr20	40450128	40450129	chr20:40450129:C:T	rs11906712	C	T	C	Sox2_MA0143.3	10	0	-	0	0	.
chr20	40663867	40663868	chr20:40663868:T:C	chr20:40663868:T:C	T	C	T	Sox2_MA0143.3	9	0	-	0	0	.
chr20	40688979	40688980	chr20:40688980:G:A	rs565077274	G	A	g	Sox2_MA0143.3	-16	0	+	0	0	.
chr20	40689677	40689678	chr20:40689678:C:T	rs546259036	C	T	C	Sox2_MA0143.3	17	0	+	0	0	.
chr20	40699540	40699541	chr20:40699541:A:G	rs6102098	A	G	A	Sox2_MA0143.3	27	0	-	0	0	.
chr20	40766790	40766791	chr20:40766791:G:C	rs6102141	G	C	c	Sox2_MA0143.3	-4	0	+	0	0	.
chr20	40772058	40772059	chr20:40772059:C:A	rs35879186	C	A	c	Sox2_MA0143.3	17	0	-	0	0	.
chr20	40797657	40797658	chr20:40797658:A:G	rs146060232	A	G	A	Sox2_MA0143.3	-3	0	-	0	0	.
chr20	40865363	40865364	chr20:40865364:G:A	rs62208614	G	A	g	Sox2_MA0143.3	-14	0	+	0	0	.
chr20	40892879	40892880	chr20:40892880:C:T	rs73303020	C	T	C	Sox2_MA0143.3	-20	0	-	0	0	.
chr20	40945993	40945994	chr20:40945994:C:T	rs76145785	C	T	C	Sox2_MA0143.3	27	0	+	0	0	.
chr20	41029595	41029596	chr20:41029596:C:T	chr20:41029596:C:T	C	T	C	Sox2_MA0143.3	10	0	+	0	0	.
chr20	41136677	41136678	chr20:41136678:A:T	chr20:41136678:A:T	A	T	A	Sox2_MA0143.3	12	0	-	0	0	.
chr20	41136696	41136697	chr20:41136697:G:A	rs34959262	G	A	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr20	41179128	41179129	chr20:41179129:G:A	rs2235363	G	A	G	Sox2_MA0143.3	20	0	-	0	0	.
chr20	41232431	41232432	chr20:41232432:G:A	rs994725672	G	A	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr20	41300967	41300968	chr20:41300968:G:A	rs4812491	G	A	G	Sox2_MA0143.3	25	0	-	0	0	.
chr20	41334234	41334235	chr20:41334235:T:C	rs6513716	T	C	T	Sox2_MA0143.3	2	1	-	9.613475778572903	3.494828071296623	CCATTGTT
chr20	41334350	41334351	chr20:41334351:A:C	rs6016547	A	C	A	Sox2_MA0143.3	4	1	-	3.5547341015215945	-3.3540206777936254	CCTTTGTA
chr20	41388029	41388030	chr20:41388030:A:G	rs7270793	A	G	A	Sox2_MA0143.3	12	0	-	0	0	.
chr20	41391203	41391204	chr20:41391204:C:T	rs6102398	C	T	C	Sox2_MA0143.3	20	0	-	0	0	.
chr20	41411811	41411812	chr20:41411812:G:A	rs2294577	G	A	A	Sox2_MA0143.3	19	0	-	0	0	.
chr20	41425672	41425673	chr20:41425673:G:C	rs9941768	G	C	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr20	41483259	41483260	chr20:41483260:G:A	rs2143228	G	A	A	Sox2_MA0143.3	-13	0	+	0	0	.
chr20	41497469	41497470	chr20:41497470:C:T	chr20:41497470:C:T	C	T	C	Sox2_MA0143.3	0	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr20	41499933	41499934	chr20:41499934:G:A	rs2294562	G	A	G	Sox2_MA0143.3	12	0	+	0	0	.
chr20	41580260	41580261	chr20:41580261:G:C	rs78420563	G	C	G	Sox2_MA0143.3	21	0	+	0	0	.
chr20	41586380	41586381	chr20:41586381:C:T	rs117867097	C	T	C	Sox2_MA0143.3	9	0	+	0	0	.
chr20	41618545	41618546	chr20:41618546:G:A	rs549262220	G	A	G	Sox2_MA0143.3	-14	0	+	0	0	.
chr20	41618571	41618572	chr20:41618572:T:C	rs965100271	T	C	T	Sox2_MA0143.3	12	0	+	0	0	.
chr20	41693120	41693121	chr20:41693121:G:C	rs997738850	G	C	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr20	41693150	41693151	chr20:41693151:C:G	rs73907198	C	G	G	Sox2_MA0143.3	22	0	+	0	0	.
chr20	42191703	42191704	chr20:42191704:C:T	rs111956108	C	T	C	Sox2_MA0143.3	16	0	-	0	0	.
chr20	42191727	42191728	chr20:42191728:G:A	rs188090549	G	A	A	Sox2_MA0143.3	-8	0	-	0	0	.
chr20	42369754	42369755	chr20:42369755:G:C	rs6072703	G	C	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr20	42379867	42379868	chr20:42379868:G:A	rs78570746	G	A	G	Sox2_MA0143.3	24	0	-	0	0	.
chr20	42391686	42391687	chr20:42391687:A:G	rs16986829	A	G	G	Sox2_MA0143.3	13	0	-	0	0	.
chr20	42391707	42391708	chr20:42391708:C:T	rs3091536	C	T	T	Sox2_MA0143.3	-8	0	-	0	0	.
chr20	42492651	42492652	chr20:42492652:G:A	rs6030282	G	A	A	Sox2_MA0143.3	19	0	+	0	0	.
chr20	42583272	42583273	chr20:42583273:A:G	rs17747544	A	G	G	Sox2_MA0143.3	13	0	-	0	0	.
chr20	42612211	42612212	chr20:42612212:C:T	rs6102947	C	T	T	Sox2_MA0143.3	11	0	+	0	0	.
chr20	42938680	42938681	chr20:42938681:C:T	rs145285533	C	T	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr20	43136849	43136850	chr20:43136850:C:T	rs6065579	C	T	C	Sox2_MA0143.3	26	0	-	0	0	.
chr20	43268807	43268808	chr20:43268808:A:G	rs117535798	A	G	A	Sox2_MA0143.3	19	0	-	0	0	.
chr20	43268834	43268835	chr20:43268835:A:G	rs6103217	A	G	A	Sox2_MA0143.3	-8	0	-	0	0	.
chr20	43273613	43273614	chr20:43273614:C:T	rs6030749	C	T	T	Sox2_MA0143.3	-17	0	-	0	0	.
chr20	43334249	43334250	chr20:43334250:G:A	rs113035915	G	A	G	Sox2_MA0143.3	23	0	+	0	0	.
chr20	43379272	43379273	chr20:43379273:T:A	rs16988006	T	A	T	Sox2_MA0143.3	2	1	-	9.019595766176417	9.206767037375712	CCATTGTC
chr20	43457113	43457114	chr20:43457114:A:T	rs78357563	A	T	A	Sox2_MA0143.3	20	0	-	0	0	.
chr20	43457884	43457885	chr20:43457885:G:A	rs189897540	G	A	G	Sox2_MA0143.3	-9	0	+	0	0	.
chr20	43457896	43457897	chr20:43457897:T:C	rs568488963	T	C	T	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr20	43457899	43457900	chr20:43457900:T:C	rs529720695	T	C	T	Sox2_MA0143.3	6	1	+	8.676919043985553	1.7681642646703326	CCATTGTG
chr20	43525631	43525632	chr20:43525632:A:G	rs6030939	A	G	A	Sox2_MA0143.3	19	0	+	0	0	.
chr20	43551931	43551932	chr20:43551932:T:A	rs138523972	T	A	T	Sox2_MA0143.3	18	0	+	0	0	.
chr20	43565967	43565968	chr20:43565968:G:A	rs6065626	G	A	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr20	43568125	43568126	chr20:43568126:G:A	rs116901202	G	A	G	Sox2_MA0143.3	0	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr20	43725520	43725521	chr20:43725521:C:T	rs144519980	C	T	C	Sox2_MA0143.3	23	0	-	0	0	.
chr20	43725532	43725533	chr20:43725533:G:A	rs62224670	G	A	G	Sox2_MA0143.3	11	0	-	0	0	.
chr20	43799675	43799676	chr20:43799676:G:A	rs148924512	G	A	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr20	43821830	43821831	chr20:43821831:A:G	rs6093885	A	G	A	Sox2_MA0143.3	-18	0	+	0	0	.
chr20	43840401	43840402	chr20:43840402:C:G	rs2143561	C	G	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr20	43922998	43922999	chr20:43922999:C:T	rs73908111	C	T	C	Sox2_MA0143.3	27	0	-	0	0	.
chr20	43954382	43954383	chr20:43954383:C:T	rs11086912	C	T	T	Sox2_MA0143.3	-10	0	+	0	0	.
chr20	44065389	44065390	chr20:44065390:A:C	rs4812779	A	C	C	Sox2_MA0143.3	14	0	-	0	0	.
chr20	44091496	44091497	chr20:44091497:C:T	rs4441533	C	T	C	Sox2_MA0143.3	24	0	-	0	0	.
chr20	44103359	44103360	chr20:44103360:A:T	rs6073326	A	T	T	Sox2_MA0143.3	-17	0	-	0	0	.
chr20	44107320	44107321	chr20:44107321:C:G	rs4378864	C	G	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr20	44172101	44172102	chr20:44172102:G:A	rs12624928	G	A	A	Sox2_MA0143.3	15	0	-	0	0	.
chr20	44175112	44175113	chr20:44175113:T:C	rs6124628	T	C	C	Sox2_MA0143.3	27	0	+	0	0	.
chr20	44181554	44181555	chr20:44181555:C:G	rs6017285	C	G	C	Sox2_MA0143.3	0	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr20	44184727	44184728	chr20:44184728:C:G	rs4812793	C	G	t	Sox2_MA0143.3	-15	0	+	0	0	.
chr20	44247793	44247794	chr20:44247794:T:G	rs34164558	T	G	G	Sox2_MA0143.3	26	0	-	0	0	.
chr20	44338753	44338754	chr20:44338754:G:A	rs6073412	G	A	G	Sox2_MA0143.3	19	0	+	0	0	.
chr20	44406519	44406520	chr20:44406520:G:C	rs3212184	G	C	C	Sox2_MA0143.3	8	0	+	0	0	.
chr20	44408008	44408009	chr20:44408009:A:G	rs8121034	A	G	A	Sox2_MA0143.3	19	0	-	0	0	.
chr20	44413489	44413490	chr20:44413490:C:G	rs13041396	C	G	C	Sox2_MA0143.3	0	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr20	44429455	44429456	chr20:44429456:C:G	rs3746575	C	G	G	Sox2_MA0143.3	23	0	-	0	0	.
chr20	44521667	44521668	chr20:44521668:G:A	rs6103759	G	A	G	Sox2_MA0143.3	24	0	-	0	0	.
chr20	44824200	44824201	chr20:44824201:T:G	rs77457575	T	G	T	Sox2_MA0143.3	-19	0	+	0	0	.
chr20	44969490	44969491	chr20:44969491:C:T	rs76489820	C	T	C	Sox2_MA0143.3	10	0	+	0	0	.
chr20	44970401	44970402	chr20:44970402:C:T	rs117802554	C	T	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr20	45036348	45036349	chr20:45036349:G:A	rs1073256	G	A	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr20	45049641	45049642	chr20:45049642:T:C	rs2299977	T	C	T	Sox2_MA0143.3	24	0	-	0	0	.
chr20	45067120	45067121	chr20:45067121:T:C	rs6073622	T	C	T	Sox2_MA0143.3	16	0	+	0	0	.
chr20	45319552	45319553	chr20:45319553:C:T	rs6017542	C	T	C	Sox2_MA0143.3	0	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr20	45345930	45345931	chr20:45345931:G:C	rs2251577	G	C	G	Sox2_MA0143.3	18	0	-	0	0	.
chr20	45359739	45359740	chr20:45359740:A:G	rs2743403	A	G	G	Sox2_MA0143.3	2	1	-	9.800647049772198	3.494828071296623	CCTTTGTT
chr20	45360588	45360589	chr20:45360589:C:A	rs2741433	C	A	A	Sox2_MA0143.3	5	1	-	8.676919043985553	1.7681642646703324	CCATTGTG
chr20	45360589	45360590	chr20:45360590:A:C	rs2743408	A	C	C	Sox2_MA0143.3	4	1	-	8.676919043985553	1.7681642646703322	CCATTGTG
chr20	45387461	45387462	chr20:45387462:A:G	rs2263763	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr20	45408224	45408225	chr20:45408225:C:T	rs11541733	C	T	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr20	45415798	45415799	chr20:45415799:G:T	rs557527732	G	T	G	Sox2_MA0143.3	0	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr20	45444290	45444291	chr20:45444291:A:G	rs73303836	A	G	G	Sox2_MA0143.3	3	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr20	45448488	45448489	chr20:45448489:G:C	rs3746592	G	C	C	Sox2_MA0143.3	19	0	-	0	0	.
chr20	45470696	45470697	chr20:45470697:A:C	rs1997745	A	C	C	Sox2_MA0143.3	14	0	-	0	0	.
chr20	45470722	45470723	chr20:45470723:C:T	rs537549782	C	T	C	Sox2_MA0143.3	-12	0	-	0	0	.
chr20	45485638	45485639	chr20:45485639:C:T	rs6032226	C	T	c	Sox2_MA0143.3	-1	0	-	0	0	.
chr20	45503566	45503567	chr20:45503567:C:T	rs12481603	C	T	c	Sox2_MA0143.3	0	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr20	45564583	45564584	chr20:45564584:C:G	rs57700915	C	G	G	Sox2_MA0143.3	5	1	-	9.019595766176417	2.110840986861197	CCATTGTC
chr20	45609789	45609790	chr20:45609790:G:T	rs2425713	G	T	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr20	45621847	45621848	chr20:45621848:C:G	rs6104249	C	G	C	Sox2_MA0143.3	1	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr20	45737067	45737068	chr20:45737068:T:C	rs422583	T	C	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr20	45829893	45829894	chr20:45829894:C:A	rs2742654	C	A	A	Sox2_MA0143.3	-11	0	+	0	0	.
chr20	45829931	45829932	chr20:45829932:T:A	rs8116061	T	A	A	Sox2_MA0143.3	27	0	+	0	0	.
chr20	45934206	45934207	chr20:45934207:G:C	rs536103110	G	C	G	Sox2_MA0143.3	8	0	-	0	0	.
chr20	45935029	45935030	chr20:45935030:G:C	rs908475951	G	C	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr20	46016513	46016514	chr20:46016514:T:C	rs9509	T	C	C	Sox2_MA0143.3	4	1	+	9.800647049772198	2.8918922704569785	CCTTTGTT
chr20	46089887	46089888	chr20:46089888:A:C	rs934125971	A	C	a	Sox2_MA0143.3	22	0	-	0	0	.
chr20	46126736	46126737	chr20:46126737:G:C	rs41282788	G	C	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr20	46130498	46130499	chr20:46130499:G:A	rs11086999	G	A	G	Sox2_MA0143.3	24	0	-	0	0	.
chr20	46130521	46130522	chr20:46130522:G:A	rs2143698	G	A	G	Sox2_MA0143.3	1	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr20	46130526	46130527	chr20:46130527:G:A	rs2143699	G	A	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr20	46145813	46145814	chr20:46145814:C:T	rs753221	C	T	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr20	46178003	46178004	chr20:46178004:G:A	rs34603854	G	A	G	Sox2_MA0143.3	13	0	-	0	0	.
chr20	46201165	46201166	chr20:46201166:G:C	rs116751021	G	C	G	Sox2_MA0143.3	12	0	-	0	0	.
chr20	46205581	46205582	chr20:46205582:T:G	rs2425777	T	G	T	Sox2_MA0143.3	25	0	-	0	0	.
chr20	46214827	46214828	chr20:46214828:C:G	rs917211247	C	G	C	Sox2_MA0143.3	26	0	+	0	0	.
chr20	46341981	46341982	chr20:46341982:T:C	rs1885172	T	C	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr20	46405560	46405561	chr20:46405561:G:A	rs761334676	G	A	g	Sox2_MA0143.3	-13	0	-	0	0	.
chr20	46449334	46449335	chr20:46449335:G:A	rs460869	G	A	A	Sox2_MA0143.3	-11	0	+	0	0	.
chr20	46544738	46544739	chr20:46544739:A:G	rs75703557	A	G	A	Sox2_MA0143.3	18	0	+	0	0	.
chr20	46547914	46547915	chr20:46547915:G:A	rs6017911	G	A	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr20	46560473	46560474	chr20:46560474:T:G	rs910063	T	G	T	Sox2_MA0143.3	25	0	-	0	0	.
chr20	46562385	46562386	chr20:46562386:G:A	rs73132208	G	A	G	Sox2_MA0143.3	11	0	+	0	0	.
chr20	46574172	46574173	chr20:46574173:C:T	rs16991552	C	T	C	Sox2_MA0143.3	26	0	-	0	0	.
chr20	46720077	46720078	chr20:46720078:T:C	rs2143044	T	C	C	Sox2_MA0143.3	25	0	+	0	0	.
chr20	46831683	46831684	chr20:46831684:G:A	rs6066084	G	A	A	Sox2_MA0143.3	-12	0	+	0	0	.
chr20	46843378	46843379	chr20:46843379:G:A	rs2184102	G	A	G	Sox2_MA0143.3	16	0	-	0	0	.
chr20	46979783	46979784	chr20:46979784:C:T	rs541425331	C	T	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr20	47118974	47118975	chr20:47118975:G:T	rs73624604	G	T	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr20	47146905	47146906	chr20:47146906:C:T	chr20:47146906:C:T	C	T	C	Sox2_MA0143.3	23	0	-	0	0	.
chr20	47175763	47175764	chr20:47175764:A:G	rs6018320	A	G	A	Sox2_MA0143.3	9	0	+	0	0	.
chr20	47181686	47181687	chr20:47181687:A:G	rs6018325	A	G	A	Sox2_MA0143.3	-7	0	+	0	0	.
chr20	47193333	47193334	chr20:47193334:T:C	rs13039233	T	C	C	Sox2_MA0143.3	18	0	+	0	0	.
chr20	47247002	47247003	chr20:47247003:G:C	rs6063089	G	C	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr20	47336529	47336530	chr20:47336530:C:T	rs561293931	C	T	C	Sox2_MA0143.3	14	0	+	0	0	.
chr20	47429626	47429627	chr20:47429627:T:C	rs80170475	T	C	T	Sox2_MA0143.3	3	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr20	47479713	47479714	chr20:47479714:C:G	rs12480081	C	G	C	Sox2_MA0143.3	1	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr20	47664165	47664166	chr20:47664166:C:T	rs10048853	C	T	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr20	47682591	47682592	chr20:47682592:T:C	rs34911493	T	C	T	Sox2_MA0143.3	26	0	+	0	0	.
chr20	47711089	47711090	chr20:47711090:G:C	rs114494524	G	C	G	Sox2_MA0143.3	0	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr20	47757538	47757539	chr20:47757539:T:C	rs55887620	T	C	T	Sox2_MA0143.3	21	0	-	0	0	.
chr20	47761016	47761017	chr20:47761017:G:A	rs1591169	G	A	A	Sox2_MA0143.3	25	0	+	0	0	.
chr20	47842268	47842269	chr20:47842269:C:A	rs6122623	C	A	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr20	47878604	47878605	chr20:47878605:C:A	rs73305220	C	A	C	Sox2_MA0143.3	0	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr20	47878605	47878606	chr20:47878606:C:G	rs544336787	C	G	C	Sox2_MA0143.3	1	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr20	47904982	47904983	chr20:47904983:C:G	rs6063172	C	G	C	Sox2_MA0143.3	26	0	+	0	0	.
chr20	47913250	47913251	chr20:47913251:T:C	rs2426036	T	C	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr20	47956157	47956158	chr20:47956158:C:T	rs73913251	C	T	C	Sox2_MA0143.3	17	0	-	0	0	.
chr20	47992952	47992953	chr20:47992953:G:C	rs12479809	G	C	G	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr20	48019357	48019358	chr20:48019358:A:T	rs1812700	A	T	T	Sox2_MA0143.3	20	0	+	0	0	.
chr20	48065010	48065011	chr20:48065011:G:A	rs74901006	G	A	g	Sox2_MA0143.3	-6	0	+	0	0	.
chr20	48150747	48150748	chr20:48150748:T:C	rs11698870	T	C	T	Sox2_MA0143.3	-2	0	+	0	0	.
chr20	48174946	48174947	chr20:48174947:G:A	rs228228	G	A	A	Sox2_MA0143.3	-17	0	-	0	0	.
chr20	48223920	48223921	chr20:48223921:G:A	rs6018983	G	A	G	Sox2_MA0143.3	15	0	+	0	0	.
chr20	48238785	48238786	chr20:48238786:G:A	rs139105187	G	A	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr20	48295540	48295541	chr20:48295541:A:G	rs115038463	A	G	a	Sox2_MA0143.3	-14	0	+	0	0	.
chr20	48400081	48400082	chr20:48400082:G:C	rs6012413	G	C	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr20	48400087	48400088	chr20:48400088:C:T	rs6012414	C	T	C	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr20	48425500	48425501	chr20:48425501:C:T	rs28523935	C	T	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr20	48461213	48461214	chr20:48461214:C:T	rs4458263	C	T	C	Sox2_MA0143.3	12	0	+	0	0	.
chr20	48461224	48461225	chr20:48461225:C:G	rs4519592	C	G	G	Sox2_MA0143.3	23	0	+	0	0	.
chr20	48520984	48520985	chr20:48520985:A:T	rs6125363	A	T	T	Sox2_MA0143.3	-8	0	+	0	0	.
chr20	48523295	48523296	chr20:48523296:C:T	chr20:48523296:C:T	C	T	C	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr20	48579692	48579693	chr20:48579693:T:C	rs6122700	T	C	C	Sox2_MA0143.3	13	0	-	0	0	.
chr20	48579828	48579829	chr20:48579829:A:G	rs6125386	A	G	T	Sox2_MA0143.3	-7	0	-	0	0	.
chr20	48609473	48609474	chr20:48609474:T:C	rs4810831	T	C	C	Sox2_MA0143.3	4	1	+	9.800647049772198	2.8918922704569785	CCTTTGTT
chr20	48616658	48616659	chr20:48616659:C:T	rs186936175	C	T	T	Sox2_MA0143.3	-18	0	+	0	0	.
chr20	48616662	48616663	chr20:48616663:C:G	rs6063293	C	G	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr20	48621039	48621040	chr20:48621040:G:T	rs138353843	G	T	G	Sox2_MA0143.3	10	0	+	0	0	.
chr20	48629588	48629589	chr20:48629589:G:A	rs3936193	G	A	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr20	48658880	48658881	chr20:48658881:A:G	rs55889922	A	G	G	Sox2_MA0143.3	17	0	-	0	0	.
chr20	48684837	48684838	chr20:48684838:G:A	rs34939089	G	A	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr20	48699042	48699043	chr20:48699043:A:G	rs761272	A	G	G	Sox2_MA0143.3	4	1	-	9.800647049772198	2.8918922704569785	CCTTTGTT
chr20	48705336	48705337	chr20:48705337:G:C	rs149676717	G	C	G	Sox2_MA0143.3	10	0	-	0	0	.
chr20	48705364	48705365	chr20:48705365:A:G	rs73150028	A	G	A	Sox2_MA0143.3	-18	0	-	0	0	.
chr20	48747167	48747168	chr20:48747168:G:C	rs149010895	G	C	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr20	48751453	48751454	chr20:48751454:T:C	rs4810872	T	C	T	Sox2_MA0143.3	-19	0	-	0	0	.
chr20	48752909	48752910	chr20:48752910:A:G	rs1883744	A	G	A	Sox2_MA0143.3	19	0	-	0	0	.
chr20	48809588	48809589	chr20:48809589:T:G	rs16994152	T	G	T	Sox2_MA0143.3	-11	0	+	0	0	.
chr20	48929277	48929278	chr20:48929278:C:T	rs1045797191	C	T	C	Sox2_MA0143.3	1	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr20	48930371	48930372	chr20:48930372:G:A	rs111838756	G	A	G	Sox2_MA0143.3	-11	0	+	0	0	.
chr20	49032316	49032317	chr20:49032317:C:T	rs1022687	C	T	T	Sox2_MA0143.3	15	0	-	0	0	.
chr20	49096525	49096526	chr20:49096526:C:T	rs17632	C	T	T	Sox2_MA0143.3	-6	0	-	0	0	.
chr20	49104554	49104555	chr20:49104555:A:G	rs911412	A	G	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr20	49230060	49230061	chr20:49230061:G:T	rs6019703	G	T	G	Sox2_MA0143.3	-9	0	+	0	0	.
chr20	49257467	49257468	chr20:49257468:A:G	rs3021	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr20	49282522	49282523	chr20:49282523:T:C	rs238198	T	C	T	Sox2_MA0143.3	8	0	+	0	0	.
chr20	49348101	49348102	chr20:49348102:T:C	rs146563276	T	C	T	Sox2_MA0143.3	-3	0	-	0	0	.
chr20	49384701	49384702	chr20:49384702:C:T	rs114751921	C	T	C	Sox2_MA0143.3	17	0	-	0	0	.
chr20	49384705	49384706	chr20:49384706:C:T	rs149955703	C	T	C	Sox2_MA0143.3	13	0	-	0	0	.
chr20	49387088	49387089	chr20:49387089:A:G	rs62209162	A	G	A	Sox2_MA0143.3	-14	0	-	0	0	.
chr20	49398943	49398944	chr20:49398944:C:T	rs6012653	C	T	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr20	49567995	49567996	chr20:49567996:G:A	rs1370116369	G	A	G	Sox2_MA0143.3	-9	0	+	0	0	.
chr20	49568019	49568020	chr20:49568020:G:A	rs200232468	G	A	G	Sox2_MA0143.3	15	0	+	0	0	.
chr20	49568022	49568023	chr20:49568023:G:T	rs116939356	G	T	G	Sox2_MA0143.3	18	0	+	0	0	.
chr20	49595113	49595114	chr20:49595114:G:C	rs483729	G	C	C	Sox2_MA0143.3	12	0	-	0	0	.
chr20	49612354	49612355	chr20:49612355:G:T	rs564509302	G	T	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr20	49616008	49616009	chr20:49616009:T:A	rs34668407	T	A	T	Sox2_MA0143.3	-8	0	+	0	0	.
chr20	49699850	49699851	chr20:49699851:A:G	rs4810978	A	G	G	Sox2_MA0143.3	9	0	-	0	0	.
chr20	49733806	49733807	chr20:49733807:G:A	rs6095633	G	A	G	Sox2_MA0143.3	11	0	+	0	0	.
chr20	49733880	49733881	chr20:49733881:G:A	rs74866141	G	A	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr20	49743352	49743353	chr20:49743353:G:A	rs73267157	G	A	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr20	49776273	49776274	chr20:49776274:T:C	rs147616131	T	C	T	Sox2_MA0143.3	9	0	-	0	0	.
chr20	49810810	49810811	chr20:49810811:C:T	rs1576207	C	T	c	Sox2_MA0143.3	22	0	+	0	0	.
chr20	49848281	49848282	chr20:49848282:G:T	rs6020085	G	T	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr20	49867703	49867704	chr20:49867704:G:A	rs2281223	G	A	G	Sox2_MA0143.3	16	0	+	0	0	.
chr20	49871956	49871957	chr20:49871957:T:C	rs2281222	T	C	T	Sox2_MA0143.3	-6	0	+	0	0	.
chr20	49969017	49969018	chr20:49969018:G:A	rs11696444	G	A	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr20	50014102	50014103	chr20:50014103:T:C	rs113303417	T	C	T	Sox2_MA0143.3	21	0	-	0	0	.
chr20	50025798	50025799	chr20:50025799:T:C	rs6067324	T	C	t	Sox2_MA0143.3	14	0	+	0	0	.
chr20	50027112	50027113	chr20:50027113:T:C	rs1555317	T	C	C	Sox2_MA0143.3	2	1	-	9.613475778572903	3.494828071296623	CCATTGTT
chr20	50028149	50028150	chr20:50028150:T:A	rs8119515	T	A	T	Sox2_MA0143.3	3	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr20	50078092	50078093	chr20:50078093:C:T	rs78825320	C	T	C	Sox2_MA0143.3	14	0	+	0	0	.
chr20	50169424	50169425	chr20:50169425:G:A	rs150918901	G	A	G	Sox2_MA0143.3	10	0	+	0	0	.
chr20	50243219	50243220	chr20:50243220:G:C	rs6063492	G	C	C	Sox2_MA0143.3	21	0	-	0	0	.
chr20	50267657	50267658	chr20:50267658:A:G	rs62208621	A	G	A	Sox2_MA0143.3	18	0	-	0	0	.
chr20	50306880	50306881	chr20:50306881:T:G	rs6067399	T	G	T	Sox2_MA0143.3	3	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr20	50394963	50394964	chr20:50394964:T:C	rs4811058	T	C	C	Sox2_MA0143.3	20	0	-	0	0	.
chr20	50413239	50413240	chr20:50413240:G:C	rs1054544835	G	C	G	Sox2_MA0143.3	16	0	+	0	0	.
chr20	50434779	50434780	chr20:50434780:C:T	rs6095935	C	T	C	Sox2_MA0143.3	18	0	-	0	0	.
chr20	50506895	50506896	chr20:50506896:G:A	rs6095985	G	A	G	Sox2_MA0143.3	1	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr20	50510744	50510745	chr20:50510745:A:C	rs6067471	A	C	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr20	50551413	50551414	chr20:50551414:A:G	rs16995291	A	G	A	Sox2_MA0143.3	3	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr20	50581789	50581790	chr20:50581790:G:A	rs2426164	G	A	A	Sox2_MA0143.3	24	0	+	0	0	.
chr20	50642214	50642215	chr20:50642215:G:T	rs6020661	G	T	T	Sox2_MA0143.3	-7	0	+	0	0	.
chr20	50688460	50688461	chr20:50688461:A:G	rs6067512	A	G	A	Sox2_MA0143.3	-1	0	+	0	0	.
chr20	50701816	50701817	chr20:50701817:C:T	rs6122965	C	T	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr20	50738977	50738978	chr20:50738978:T:C	rs6020718	T	C	C	Sox2_MA0143.3	3	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr20	50744882	50744883	chr20:50744883:G:T	rs112125733	G	T	G	Sox2_MA0143.3	-3	0	+	0	0	.
chr20	50746644	50746645	chr20:50746645:G:T	rs2064278	G	T	G	Sox2_MA0143.3	10	0	-	0	0	.
chr20	50843768	50843769	chr20:50843769:A:G	rs73127473	A	G	A	Sox2_MA0143.3	-16	0	+	0	0	.
chr20	50872982	50872983	chr20:50872983:G:A	rs6096137	G	A	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr20	50895369	50895370	chr20:50895370:G:C	rs6091233	G	C	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr20	50929831	50929832	chr20:50929832:T:C	rs73263700	T	C	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr20	51071109	51071110	chr20:51071110:T:C	rs11086320	T	C	T	Sox2_MA0143.3	-19	0	+	0	0	.
chr20	51092836	51092837	chr20:51092837:G:A	rs6067640	G	A	A	Sox2_MA0143.3	-3	0	+	0	0	.
chr20	51092857	51092858	chr20:51092858:G:C	rs8122529	G	C	C	Sox2_MA0143.3	18	0	+	0	0	.
chr20	51096382	51096383	chr20:51096383:C:A	rs1570010	C	A	A	Sox2_MA0143.3	-11	0	+	0	0	.
chr20	51127924	51127925	chr20:51127925:C:A	rs34085766	C	A	C	Sox2_MA0143.3	1	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr20	51144379	51144380	chr20:51144380:T:C	rs230031	T	C	T	Sox2_MA0143.3	3	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr20	51166334	51166335	chr20:51166335:A:G	rs13039220	A	G	A	Sox2_MA0143.3	-17	0	+	0	0	.
chr20	51197194	51197195	chr20:51197195:A:C	rs537341105	A	C	A	Sox2_MA0143.3	-8	0	+	0	0	.
chr20	51259013	51259014	chr20:51259014:A:G	rs115612190	A	G	a	Sox2_MA0143.3	-7	0	+	0	0	.
chr20	51259035	51259036	chr20:51259036:C:T	rs1031002643	C	T	C	Sox2_MA0143.3	15	0	+	0	0	.
chr20	51328014	51328015	chr20:51328015:G:A	rs55893176	G	A	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr20	51372203	51372204	chr20:51372204:G:A	rs1035541133	G	A	G	Sox2_MA0143.3	-3	0	+	0	0	.
chr20	51377451	51377452	chr20:51377452:C:T	rs6021158	C	T	T	Sox2_MA0143.3	-8	0	-	0	0	.
chr20	51400490	51400491	chr20:51400491:A:G	rs1416183923	A	G	A	Sox2_MA0143.3	-5	0	-	0	0	.
chr20	51423548	51423549	chr20:51423549:A:G	rs6067766	A	G	A	Sox2_MA0143.3	-20	0	-	0	0	.
chr20	51437652	51437653	chr20:51437653:G:A	rs880324	G	A	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr20	51446503	51446504	chr20:51446504:G:A	rs73269951	G	A	G	Sox2_MA0143.3	15	0	-	0	0	.
chr20	51484693	51484694	chr20:51484694:T:C	rs775680790	T	C	T	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr20	51554584	51554585	chr20:51554585:G:A	rs6096471	G	A	T	Sox2_MA0143.3	20	0	+	0	0	.
chr20	51639567	51639568	chr20:51639568:T:C	rs2426334	T	C	C	Sox2_MA0143.3	13	0	-	0	0	.
chr20	51697028	51697029	chr20:51697029:G:C	rs13044013	G	C	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr20	51703408	51703409	chr20:51703409:A:C	rs2181875	A	C	A	Sox2_MA0143.3	-15	0	-	0	0	.
chr20	51710674	51710675	chr20:51710675:T:C	rs6067908	T	C	T	Sox2_MA0143.3	13	0	-	0	0	.
chr20	51711724	51711725	chr20:51711725:T:C	rs192575491	T	C	T	Sox2_MA0143.3	-18	0	-	0	0	.
chr20	51733152	51733153	chr20:51733153:C:T	rs73135659	C	T	C	Sox2_MA0143.3	0	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr20	51768281	51768282	chr20:51768282:A:G	rs3746416	A	G	c	Sox2_MA0143.3	-6	0	-	0	0	.
chr20	51958782	51958783	chr20:51958783:G:A	rs17730522	G	A	g	Sox2_MA0143.3	-12	0	-	0	0	.
chr20	52048674	52048675	chr20:52048675:C:T	rs73281721	C	T	T	Sox2_MA0143.3	-9	0	+	0	0	.
chr20	52349904	52349905	chr20:52349905:A:G	rs6096895	A	G	A	Sox2_MA0143.3	12	0	-	0	0	.
chr20	52465983	52465984	chr20:52465984:T:C	rs7274379	T	C	t	Sox2_MA0143.3	11	0	+	0	0	.
chr20	52540702	52540703	chr20:52540703:A:C	rs1884003	A	C	A	Sox2_MA0143.3	-11	0	+	0	0	.
chr20	52540709	52540710	chr20:52540710:C:T	rs1884004	C	T	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr20	52552420	52552421	chr20:52552421:A:C	rs6063823	A	C	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr20	52676384	52676385	chr20:52676385:C:T	rs6022039	C	T	T	Sox2_MA0143.3	24	0	+	0	0	.
chr20	52748150	52748151	chr20:52748151:T:G	rs6022070	T	G	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr20	52770710	52770711	chr20:52770711:A:G	rs6013520	A	G	A	Sox2_MA0143.3	-7	0	+	0	0	.
chr20	52824919	52824920	chr20:52824920:G:A	rs6063882	G	A	A	Sox2_MA0143.3	-20	0	-	0	0	.
chr20	52926791	52926792	chr20:52926792:A:G	rs189635071	A	G	A	Sox2_MA0143.3	-4	0	+	0	0	.
chr20	52938301	52938302	chr20:52938302:T:C	rs78596521	T	C	T	Sox2_MA0143.3	-20	0	+	0	0	.
chr20	53021346	53021347	chr20:53021347:A:G	rs6022220	A	G	G	Sox2_MA0143.3	9	0	-	0	0	.
chr20	53082236	53082237	chr20:53082237:C:G	rs563737390	C	G	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr20	53088564	53088565	chr20:53088565:G:A	rs1936962	G	A	G	Sox2_MA0143.3	10	0	+	0	0	.
chr20	53174731	53174732	chr20:53174732:T:C	rs1293392	T	C	C	Sox2_MA0143.3	-5	0	-	0	0	.
chr20	53181336	53181337	chr20:53181337:A:C	rs62208268	A	C	A	Sox2_MA0143.3	-16	0	-	0	0	.
chr20	53271117	53271118	chr20:53271118:C:T	rs6126805	C	T	C	Sox2_MA0143.3	22	0	+	0	0	.
chr20	53302953	53302954	chr20:53302954:A:G	rs138605335	A	G	A	Sox2_MA0143.3	18	0	-	0	0	.
chr20	53346362	53346363	chr20:53346363:A:G	chr20:53346363:A:G	A	G	A	Sox2_MA0143.3	-14	0	-	0	0	.
chr20	53346363	53346364	chr20:53346364:C:T	rs6512880	C	T	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr20	53446156	53446157	chr20:53446157:G:T	chr20:53446157:G:T	G	T	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr20	53522378	53522379	chr20:53522379:A:C	rs2766641	A	C	C	Sox2_MA0143.3	27	0	+	0	0	.
chr20	53522783	53522784	chr20:53522784:G:A	rs58552634	G	A	G	Sox2_MA0143.3	16	0	+	0	0	.
chr20	53579657	53579658	chr20:53579658:C:T	rs116542165	C	T	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr20	53603961	53603962	chr20:53603962:C:T	rs138921852	C	T	c	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr20	53630066	53630067	chr20:53630067:C:T	rs6068595	C	T	c	Sox2_MA0143.3	-20	0	-	0	0	.
chr20	53679171	53679172	chr20:53679172:G:T	rs73134227	G	T	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr20	53693528	53693529	chr20:53693529:T:A	rs6022672	T	A	A	Sox2_MA0143.3	-7	0	+	0	0	.
chr20	53792468	53792469	chr20:53792469:A:G	rs4811466	A	G	G	Sox2_MA0143.3	2	1	+	8.676919043985553	2.5582713367092715	CCATTGTG
chr20	53810033	53810034	chr20:53810034:A:T	rs4811472	A	T	A	Sox2_MA0143.3	-19	0	+	0	0	.
chr20	53827245	53827246	chr20:53827246:A:C	rs73622255	A	C	A	Sox2_MA0143.3	-17	0	-	0	0	.
chr20	53828308	53828309	chr20:53828309:C:T	rs75770999	C	T	T	Sox2_MA0143.3	21	0	+	0	0	.
chr20	53922987	53922988	chr20:53922988:G:A	rs12480193	G	A	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr20	53929036	53929037	chr20:53929037:G:A	rs6068727	G	A	g	Sox2_MA0143.3	-17	0	+	0	0	.
chr20	53942309	53942310	chr20:53942310:A:G	rs2286306	A	G	A	Sox2_MA0143.3	8	0	-	0	0	.
chr20	53961678	53961679	chr20:53961679:T:C	rs184446447	T	C	T	Sox2_MA0143.3	-13	0	-	0	0	.
chr20	54160229	54160230	chr20:54160230:G:T	rs751089	G	T	G	Sox2_MA0143.3	1	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr20	54171473	54171474	chr20:54171474:A:G	rs6022999	A	G	A	Sox2_MA0143.3	-15	0	+	0	0	.
chr20	54202282	54202283	chr20:54202283:G:C	rs3950043	G	C	G	Sox2_MA0143.3	22	0	+	0	0	.
chr20	54347453	54347454	chr20:54347454:G:C	rs1293145	G	C	C	Sox2_MA0143.3	11	0	+	0	0	.
chr20	54474428	54474429	chr20:54474429:T:C	rs13040866	T	C	T	Sox2_MA0143.3	2	1	+	8.864090315184848	2.5582713367092715	CCTTTGTG
chr20	54479290	54479291	chr20:54479291:C:T	rs6098006	C	T	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr20	54983622	54983623	chr20:54983623:C:G	rs1034095	C	G	G	Sox2_MA0143.3	5	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr20	55166994	55166995	chr20:55166995:G:T	rs1571170	G	T	G	Sox2_MA0143.3	10	0	-	0	0	.
chr20	55469392	55469393	chr20:55469393:T:C	rs2426581	T	C	T	Sox2_MA0143.3	3	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr20	55790714	55790715	chr20:55790715:C:T	rs116912396	C	T	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr20	55831854	55831855	chr20:55831855:C:A	rs6098844	C	A	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr20	55879967	55879968	chr20:55879968:G:A	rs6069447	G	A	G	Sox2_MA0143.3	-3	0	-	0	0	.
chr20	56004402	56004403	chr20:56004403:C:A	rs6014573	C	A	A	Sox2_MA0143.3	27	0	+	0	0	.
chr20	56164127	56164128	chr20:56164128:C:G	rs1004114	C	G	C	Sox2_MA0143.3	14	0	-	0	0	.
chr20	56234823	56234824	chr20:56234824:A:G	rs6127687	A	G	a	Sox2_MA0143.3	13	0	-	0	0	.
chr20	56324910	56324911	chr20:56324911:T:G	rs16979781	T	G	G	Sox2_MA0143.3	8	0	-	0	0	.
chr20	56358370	56358371	chr20:56358371:C:G	rs142384665	C	G	C	Sox2_MA0143.3	1	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr20	56369011	56369012	chr20:56369012:G:A	rs6024836	G	A	A	Sox2_MA0143.3	23	0	+	0	0	.
chr20	56596270	56596271	chr20:56596271:A:T	rs6024982	A	T	T	Sox2_MA0143.3	-14	0	+	0	0	.
chr20	56715474	56715475	chr20:56715475:T:C	rs2426640	T	C	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr20	56728570	56728571	chr20:56728571:G:T	rs373685667	G	T	G	Sox2_MA0143.3	-9	0	+	0	0	.
chr20	56737721	56737722	chr20:56737722:G:T	rs6064444	G	T	G	Sox2_MA0143.3	10	0	-	0	0	.
chr20	56778887	56778888	chr20:56778888:C:T	rs139984649	C	T	C	Sox2_MA0143.3	21	0	+	0	0	.
chr20	56779005	56779006	chr20:56779006:A:G	rs117427125	A	G	A	Sox2_MA0143.3	-16	0	+	0	0	.
chr20	56792228	56792229	chr20:56792229:C:T	rs2426687	C	T	T	Sox2_MA0143.3	7	1	+	9.206767037375712	9.800647049772198	CCTTTGTC
chr20	56802791	56802792	chr20:56802792:C:T	rs6064448	C	T	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr20	56875049	56875050	chr20:56875050:C:A	rs572825096	C	A	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr20	56900392	56900393	chr20:56900393:C:T	rs398548	C	T	T	Sox2_MA0143.3	-19	0	-	0	0	.
chr20	56962755	56962756	chr20:56962756:T:C	rs6069938	T	C	T	Sox2_MA0143.3	-12	0	+	0	0	.
chr20	57013732	57013733	chr20:57013733:C:T	rs115871395	C	T	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr20	57013762	57013763	chr20:57013763:A:T	rs1276342	A	T	A	Sox2_MA0143.3	11	0	+	0	0	.
chr20	57068431	57068432	chr20:57068432:T:C	rs6099431	T	C	T	Sox2_MA0143.3	-20	0	-	0	0	.
chr20	57109164	57109165	chr20:57109165:C:T	rs889173270	C	T	C	Sox2_MA0143.3	12	0	-	0	0	.
chr20	57127671	57127672	chr20:57127672:A:G	rs11697721	A	G	A	Sox2_MA0143.3	-20	0	-	0	0	.
chr20	57138135	57138136	chr20:57138136:C:G	rs6099478	C	G	-	Sox2_MA0143.3	20	0	-	0	0	.
chr20	57148803	57148804	chr20:57148804:T:C	rs6014941	T	C	C	Sox2_MA0143.3	26	0	-	0	0	.
chr20	57168013	57168014	chr20:57168014:C:T	rs12479545	C	T	C	Sox2_MA0143.3	9	0	-	0	0	.
chr20	57168031	57168032	chr20:57168032:T:G	rs1051455787	T	G	T	Sox2_MA0143.3	-9	0	-	0	0	.
chr20	57194780	57194781	chr20:57194781:C:A	chr20:57194781:C:A	C	A	C	Sox2_MA0143.3	-20	0	-	0	0	.
chr20	57229555	57229556	chr20:57229556:A:C	rs2180781	A	C	C	Sox2_MA0143.3	3	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr20	57290025	57290026	chr20:57290026:G:T	rs73284481	G	T	G	Sox2_MA0143.3	22	0	+	0	0	.
chr20	57309977	57309978	chr20:57309978:G:C	rs6064526	G	C	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr20	57399099	57399100	chr20:57399100:A:C	rs112835766	A	C	A	Sox2_MA0143.3	-1	0	-	0	0	.
chr20	57405690	57405691	chr20:57405691:G:A	rs73917118	G	A	G	Sox2_MA0143.3	-11	0	+	0	0	.
chr20	57435841	57435842	chr20:57435842:T:C	rs377226314	T	C	t	Sox2_MA0143.3	-14	0	-	0	0	.
chr20	57437617	57437618	chr20:57437618:C:T	rs2426729	C	T	c	Sox2_MA0143.3	13	0	-	0	0	.
chr20	57439431	57439432	chr20:57439432:C:T	rs144868236	C	T	c	Sox2_MA0143.3	15	0	+	0	0	.
chr20	57467809	57467810	chr20:57467810:C:T	rs6064552	C	T	C	Sox2_MA0143.3	17	0	+	0	0	.
chr20	57476331	57476332	chr20:57476332:C:T	rs2182971	C	T	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr20	57476332	57476333	chr20:57476333:A:G	rs879918	A	G	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr20	57491807	57491808	chr20:57491808:A:G	rs71329747	A	G	A	Sox2_MA0143.3	-1	0	-	0	0	.
chr20	57513370	57513371	chr20:57513371:A:G	rs73915857	A	G	A	Sox2_MA0143.3	19	0	-	0	0	.
chr20	57586678	57586679	chr20:57586679:G:A	rs4300899	G	A	a	Sox2_MA0143.3	27	0	-	0	0	.
chr20	57604877	57604878	chr20:57604878:C:T	rs56345209	C	T	C	Sox2_MA0143.3	12	0	+	0	0	.
chr20	57613932	57613933	chr20:57613933:A:G	rs2865395	A	G	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr20	57647143	57647144	chr20:57647144:A:G	rs73915230	A	G	A	Sox2_MA0143.3	-6	0	-	0	0	.
chr20	57655377	57655378	chr20:57655378:C:T	rs11699563	C	T	c	Sox2_MA0143.3	18	0	+	0	0	.
chr20	57685941	57685942	chr20:57685942:A:G	rs157103	A	G	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr20	57750297	57750298	chr20:57750298:C:T	rs6099739	C	T	C	Sox2_MA0143.3	23	0	-	0	0	.
chr20	57757676	57757677	chr20:57757677:G:C	rs73616234	G	C	G	Sox2_MA0143.3	-2	0	+	0	0	.
chr20	57760684	57760685	chr20:57760685:A:G	rs967990	A	G	G	Sox2_MA0143.3	17	0	-	0	0	.
chr20	57782077	57782078	chr20:57782078:G:C	rs77120120	G	C	G	Sox2_MA0143.3	11	0	-	0	0	.
chr20	57782107	57782108	chr20:57782108:T:C	rs911154	T	C	T	Sox2_MA0143.3	-19	0	-	0	0	.
chr20	57826949	57826950	chr20:57826950:C:T	rs6025805	C	T	C	Sox2_MA0143.3	26	0	+	0	0	.
chr20	57840525	57840526	chr20:57840526:A:G	rs4810106	A	G	G	Sox2_MA0143.3	2	1	-	9.206767037375712	2.900948058900136	CCTTTGTC
chr20	57888679	57888680	chr20:57888680:T:C	rs58657090	T	C	T	Sox2_MA0143.3	-16	0	-	0	0	.
chr20	57888683	57888684	chr20:57888684:C:A	rs76336956	C	A	C	Sox2_MA0143.3	-20	0	-	0	0	.
chr20	57899560	57899561	chr20:57899561:A:G	rs6025878	A	G	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr20	57958619	57958620	chr20:57958620:G:A	rs6092572	G	A	G	Sox2_MA0143.3	-9	0	+	0	0	.
chr20	57974228	57974229	chr20:57974229:G:A	rs6025947	G	A	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr20	57975570	57975571	chr20:57975571:G:C	rs66601115	G	C	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr20	57995864	57995865	chr20:57995865:G:A	rs145066506	G	A	G	Sox2_MA0143.3	1	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr20	58029536	58029537	chr20:58029537:T:G	rs34566167	T	G	T	Sox2_MA0143.3	-13	0	+	0	0	.
chr20	58036438	58036439	chr20:58036439:C:T	rs10153988	C	T	T	Sox2_MA0143.3	24	0	-	0	0	.
chr20	58036467	58036468	chr20:58036468:T:C	rs79939946	T	C	T	Sox2_MA0143.3	-5	0	-	0	0	.
chr20	58039761	58039762	chr20:58039762:A:G	rs150434959	A	G	A	Sox2_MA0143.3	-5	0	+	0	0	.
chr20	58055159	58055160	chr20:58055160:C:T	rs58317340	C	T	C	Sox2_MA0143.3	24	0	-	0	0	.
chr20	58055177	58055178	chr20:58055178:A:G	rs77777397	A	G	A	Sox2_MA0143.3	6	1	-	9.613475778572903	2.7047209992576837	CCATTGTT
chr20	58072054	58072055	chr20:58072055:T:C	rs6015180	T	C	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr20	58087415	58087416	chr20:58087416:G:A	rs117823779	G	A	g	Sox2_MA0143.3	-7	0	-	0	0	.
chr20	58087423	58087424	chr20:58087424:C:A	rs77612279	C	A	c	Sox2_MA0143.3	-15	0	-	0	0	.
chr20	58220332	58220333	chr20:58220333:G:A	rs550913	G	A	A	Sox2_MA0143.3	17	0	+	0	0	.
chr20	58236679	58236680	chr20:58236680:C:T	rs137926837	C	T	C	Sox2_MA0143.3	7	1	-	8.864090315184848	3.5547341015215945	CCTTTGTG
chr20	58269247	58269248	chr20:58269248:A:C	rs6128297	A	C	-	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr20	58322039	58322040	chr20:58322040:C:A	rs6100023	C	A	C	Sox2_MA0143.3	22	0	-	0	0	.
chr20	58570144	58570145	chr20:58570145:G:C	rs6026366	G	C	G	Sox2_MA0143.3	1	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr20	58606113	58606114	chr20:58606114:G:A	rs58144193	G	A	G	Sox2_MA0143.3	25	0	-	0	0	.
chr20	58608674	58608675	chr20:58608675:G:A	rs742926	G	A	A	Sox2_MA0143.3	-10	0	+	0	0	.
chr20	58644472	58644473	chr20:58644473:T:C	rs74399916	T	C	T	Sox2_MA0143.3	-4	0	+	0	0	.
chr20	58644489	58644490	chr20:58644490:A:G	rs6026421	A	G	G	Sox2_MA0143.3	13	0	+	0	0	.
chr20	58717038	58717039	chr20:58717039:T:A	rs113777984	T	A	T	Sox2_MA0143.3	20	0	-	0	0	.
chr20	58717060	58717061	chr20:58717061:G:A	rs60847866	G	A	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr20	58717066	58717067	chr20:58717067:A:C	rs79929625	A	C	A	Sox2_MA0143.3	-8	0	-	0	0	.
chr20	58746364	58746365	chr20:58746365:C:G	rs12625683	C	G	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr20	58751245	58751246	chr20:58751246:G:T	rs6100189	G	T	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr20	58819572	58819573	chr20:58819573:C:G	rs6070625	C	G	G	Sox2_MA0143.3	9	0	+	0	0	.
chr20	58819837	58819838	chr20:58819838:G:A	rs13042402	G	A	G	Sox2_MA0143.3	10	0	+	0	0	.
chr20	58911924	58911925	chr20:58911925:C:T	rs234627	C	T	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr20	58965921	58965922	chr20:58965922:G:C	rs13041230	G	C	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr20	58981104	58981105	chr20:58981105:G:C	rs577557265	G	C	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr20	58981105	58981106	chr20:58981106:C:T	rs545112347	C	T	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr20	58994804	58994805	chr20:58994805:C:G	rs1043219	C	G	C	Sox2_MA0143.3	13	0	-	0	0	.
chr20	59126564	59126565	chr20:59126565:T:C	rs6015443	T	C	T	Sox2_MA0143.3	-3	0	+	0	0	.
chr20	59150076	59150077	chr20:59150077:C:T	rs60627375	C	T	C	Sox2_MA0143.3	21	0	-	0	0	.
chr20	59159697	59159698	chr20:59159698:G:A	rs1535271	G	A	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr20	59204706	59204707	chr20:59204707:A:G	rs1369236	A	G	A	Sox2_MA0143.3	-17	0	-	0	0	.
chr20	59297829	59297830	chr20:59297830:C:T	rs260743	C	T	T	Sox2_MA0143.3	22	0	-	0	0	.
chr20	59314883	59314884	chr20:59314884:A:G	rs197179	A	G	A	Sox2_MA0143.3	27	0	+	0	0	.
chr20	59351087	59351088	chr20:59351088:A:T	rs543587100	A	T	A	Sox2_MA0143.3	6	1	-	8.676919043985553	1.7681642646703326	CCATTGTG
chr20	59416944	59416945	chr20:59416945:A:C	rs187989	A	C	C	Sox2_MA0143.3	6	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr20	59431461	59431462	chr20:59431462:C:T	rs271985	C	T	C	Sox2_MA0143.3	18	0	+	0	0	.
chr20	59457713	59457714	chr20:59457714:T:C	rs271974	T	C	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr20	59461106	59461107	chr20:59461107:A:G	rs271970	A	G	G	Sox2_MA0143.3	16	0	-	0	0	.
chr20	59606643	59606644	chr20:59606644:C:T	rs6026995	C	T	C	Sox2_MA0143.3	0	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr20	59644770	59644771	chr20:59644771:G:A	rs921322299	G	A	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr20	59678915	59678916	chr20:59678916:A:G	rs730274	A	G	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr20	59833539	59833540	chr20:59833540:T:C	rs544125283	T	C	T	Sox2_MA0143.3	11	0	-	0	0	.
chr20	59841611	59841612	chr20:59841612:T:G	rs6064846	T	G	T	Sox2_MA0143.3	12	0	-	0	0	.
chr20	60008151	60008152	chr20:60008152:A:G	rs168982	A	G	G	Sox2_MA0143.3	20	0	-	0	0	.
chr20	60011598	60011599	chr20:60011599:C:T	rs73131342	C	T	T	Sox2_MA0143.3	9	0	+	0	0	.
chr20	60021348	60021349	chr20:60021349:A:G	rs12625838	A	G	A	Sox2_MA0143.3	-7	0	+	0	0	.
chr20	60049356	60049357	chr20:60049357:G:C	rs2025049	G	C	G	Sox2_MA0143.3	5	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr20	60096896	60096897	chr20:60096897:C:T	rs1331842	C	T	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr20	60108102	60108103	chr20:60108103:G:C	rs6027310	G	C	g	Sox2_MA0143.3	27	0	-	0	0	.
chr20	60239369	60239370	chr20:60239370:T:C	rs1535028	T	C	t	Sox2_MA0143.3	-10	0	+	0	0	.
chr20	60239406	60239407	chr20:60239407:G:A	rs73139344	G	A	A	Sox2_MA0143.3	27	0	+	0	0	.
chr20	60246243	60246244	chr20:60246244:T:A	rs116601312	T	A	T	Sox2_MA0143.3	-15	0	-	0	0	.
chr20	60261928	60261929	chr20:60261929:T:A	rs6015700	T	A	A	Sox2_MA0143.3	7	1	+	9.800647049772198	3.5547341015215945	CCTTTGTT
chr20	60411043	60411044	chr20:60411044:G:T	rs1371065	G	T	G	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr20	60426657	60426658	chr20:60426658:G:C	chr20:60426658:G:C	G	C	G	Sox2_MA0143.3	12	0	+	0	0	.
chr20	60511603	60511604	chr20:60511604:G:C	rs6015768	G	C	G	Sox2_MA0143.3	-16	0	-	0	0	.
chr20	60693815	60693816	chr20:60693816:A:C	rs6101024	A	C	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr20	60693837	60693838	chr20:60693838:G:T	rs6092982	G	T	G	Sox2_MA0143.3	9	0	+	0	0	.
chr20	60780335	60780336	chr20:60780336:G:C	rs140079596	G	C	G	Sox2_MA0143.3	5	1	+	8.676919043985553	1.7681642646703324	CCATTGTG
chr20	60780343	60780344	chr20:60780344:C:G	rs80107843	C	G	C	Sox2_MA0143.3	13	0	+	0	0	.
chr20	60877725	60877726	chr20:60877726:G:A	rs4812226	G	A	A	Sox2_MA0143.3	-10	0	+	0	0	.
chr20	60921537	60921538	chr20:60921538:G:A	rs11906366	G	A	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr20	61020875	61020876	chr20:61020876:T:C	rs73305489	T	C	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr20	61030809	61030810	chr20:61030810:G:A	rs4459788	G	A	G	Sox2_MA0143.3	14	0	+	0	0	.
chr20	61090795	61090796	chr20:61090796:T:C	rs76130485	T	C	C	Sox2_MA0143.3	6	1	+	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr20	61090796	61090797	chr20:61090797:A:G	rs79132797	A	G	A	Sox2_MA0143.3	7	1	+	3.5547341015215945	8.864090315184848	CCTTTGTA
chr20	61105492	61105493	chr20:61105493:C:T	rs74617985	C	T	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr20	61124100	61124101	chr20:61124101:A:G	rs6071500	A	G	G	Sox2_MA0143.3	15	0	-	0	0	.
chr20	61124125	61124126	chr20:61124126:T:C	rs7267967	T	C	T	Sox2_MA0143.3	-10	0	-	0	0	.
chr20	61124133	61124134	chr20:61124134:A:G	rs6071501	A	G	A	Sox2_MA0143.3	-18	0	-	0	0	.
chr20	61169161	61169162	chr20:61169162:A:C	rs1117971	A	C	C	Sox2_MA0143.3	26	0	+	0	0	.
chr20	61199201	61199202	chr20:61199202:G:A	rs57122246	G	A	G	Sox2_MA0143.3	0	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr20	61216285	61216286	chr20:61216286:C:G	rs6129077	C	G	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr20	61227004	61227005	chr20:61227005:C:T	rs2426999	C	T	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr20	61254790	61254791	chr20:61254791:C:T	rs3752252	C	T	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr20	61291592	61291593	chr20:61291593:G:A	rs6124080	G	A	G	Sox2_MA0143.3	-12	0	+	0	0	.
chr20	61337423	61337424	chr20:61337424:C:A	rs60828599	C	A	C	Sox2_MA0143.3	21	0	-	0	0	.
chr20	61379916	61379917	chr20:61379917:C:G	rs6061237	C	G	G	Sox2_MA0143.3	-12	0	+	0	0	.
chr20	61404370	61404371	chr20:61404371:C:T	rs76294338	C	T	C	Sox2_MA0143.3	22	0	-	0	0	.
chr20	61436934	61436935	chr20:61436935:T:C	rs6089626	T	C	T	Sox2_MA0143.3	-6	0	-	0	0	.
chr20	61461432	61461433	chr20:61461433:A:G	rs113991705	A	G	A	Sox2_MA0143.3	-4	0	+	0	0	.
chr20	61509135	61509136	chr20:61509136:C:T	rs76836358	C	T	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr20	61627626	61627627	chr20:61627627:G:C	rs73144464	G	C	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr20	61634318	61634319	chr20:61634319:C:T	rs6061682	C	T	C	Sox2_MA0143.3	23	0	-	0	0	.
chr20	61706095	61706096	chr20:61706096:A:G	rs6121768	A	G	A	Sox2_MA0143.3	25	0	+	0	0	.
chr20	61724554	61724555	chr20:61724555:A:G	rs6142838	A	G	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr20	61740649	61740650	chr20:61740650:G:A	rs16985539	G	A	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr20	61769797	61769798	chr20:61769798:G:A	rs79364060	G	A	G	Sox2_MA0143.3	20	0	+	0	0	.
chr20	61786521	61786522	chr20:61786522:C:G	rs962207419	C	G	C	Sox2_MA0143.3	13	0	+	0	0	.
chr20	61802075	61802076	chr20:61802076:C:T	rs8114557	C	T	C	Sox2_MA0143.3	8	0	+	0	0	.
chr20	61928382	61928383	chr20:61928383:G:A	rs142995081	G	A	G	Sox2_MA0143.3	10	0	+	0	0	.
chr20	61936154	61936155	chr20:61936155:A:C	rs62205053	A	C	A	Sox2_MA0143.3	19	0	-	0	0	.
chr20	61962367	61962368	chr20:61962368:T:G	rs6121859	T	G	T	Sox2_MA0143.3	-18	0	+	0	0	.
chr20	62054958	62054959	chr20:62054959:C:T	rs11699193	C	T	C	Sox2_MA0143.3	19	0	+	0	0	.
chr20	62057633	62057634	chr20:62057634:C:T	rs1980706	C	T	T	Sox2_MA0143.3	25	0	-	0	0	.
chr20	62198433	62198434	chr20:62198434:G:A	rs74669216	G	A	g	Sox2_MA0143.3	27	0	+	0	0	.
chr20	62236908	62236909	chr20:62236909:C:T	rs978044721	C	T	C	Sox2_MA0143.3	21	0	+	0	0	.
chr20	62286854	62286855	chr20:62286855:G:A	rs145762195	G	A	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr20	62350509	62350510	chr20:62350510:A:C	chr20:62350510:A:C	A	C	A	Sox2_MA0143.3	21	0	+	0	0	.
chr20	62377723	62377724	chr20:62377724:C:G	rs79070000	C	G	C	Sox2_MA0143.3	25	0	-	0	0	.
chr20	62386712	62386713	chr20:62386713:A:G	rs2427306	A	G	G	Sox2_MA0143.3	20	0	-	0	0	.
chr20	62411240	62411241	chr20:62411241:A:G	rs1570022	A	G	G	Sox2_MA0143.3	24	0	+	0	0	.
chr20	62484903	62484904	chr20:62484904:T:C	rs6061560	T	C	T	Sox2_MA0143.3	23	0	+	0	0	.
chr20	62540670	62540671	chr20:62540671:T:C	rs4074878	T	C	c	Sox2_MA0143.3	4	1	+	8.676919043985553	1.7681642646703322	CCATTGTG
chr20	62610444	62610445	chr20:62610445:C:T	rs28723603	C	T	C	Sox2_MA0143.3	23	0	+	0	0	.
chr20	62636567	62636568	chr20:62636568:A:T	rs577765895	A	T	A	Sox2_MA0143.3	18	0	-	0	0	.
chr20	62636576	62636577	chr20:62636577:G:A	rs150574607	G	A	G	Sox2_MA0143.3	9	0	-	0	0	.
chr20	62667198	62667199	chr20:62667199:C:T	rs183681572	C	T	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr20	62667382	62667383	chr20:62667383:T:C	rs2275326	T	C	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr20	62667405	62667406	chr20:62667406:G:A	rs138954836	G	A	G	Sox2_MA0143.3	7	1	+	8.864090315184848	3.5547341015215945	CCTTTGTG
chr20	62673847	62673848	chr20:62673848:C:G	rs13037524	C	G	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr20	62830192	62830193	chr20:62830193:G:T	rs2294992	G	T	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr20	62838616	62838617	chr20:62838617:A:G	rs117657687	A	G	A	Sox2_MA0143.3	-7	0	-	0	0	.
chr20	62937464	62937465	chr20:62937465:C:T	rs6011489	C	T	C	Sox2_MA0143.3	16	0	+	0	0	.
chr20	62954281	62954282	chr20:62954282:C:T	rs150215537	C	T	C	Sox2_MA0143.3	26	0	-	0	0	.
chr20	62974110	62974111	chr20:62974111:G:A	rs67795969	G	A	g	Sox2_MA0143.3	23	0	+	0	0	.
chr20	63031800	63031801	chr20:63031801:T:G	rs4997812	T	G	G	Sox2_MA0143.3	3	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr20	63031801	63031802	chr20:63031802:T:G	rs4997813	T	G	G	Sox2_MA0143.3	4	1	+	9.800647049772198	2.8918922704569785	CCTTTGTT
chr20	63033872	63033873	chr20:63033873:A:G	rs2314131	A	G	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr20	63060615	63060616	chr20:63060616:C:T	rs1006573	C	T	C	Sox2_MA0143.3	10	0	+	0	0	.
chr20	63079535	63079536	chr20:63079536:T:C	rs62206573	T	C	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr20	63079800	63079801	chr20:63079801:T:C	rs74721148	T	C	T	Sox2_MA0143.3	15	0	-	0	0	.
chr20	63079828	63079829	chr20:63079829:A:G	rs79515916	A	G	A	Sox2_MA0143.3	-13	0	-	0	0	.
chr20	63082301	63082302	chr20:63082302:G:C	rs1018368654	G	C	G	Sox2_MA0143.3	14	0	-	0	0	.
chr20	63087797	63087798	chr20:63087798:C:A	rs79652951	C	A	C	Sox2_MA0143.3	18	0	+	0	0	.
chr20	63096451	63096452	chr20:63096452:G:A	rs73312531	G	A	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr20	63103499	63103500	chr20:63103500:G:A	chr20:63103500:G:A	G	A	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr20	63103526	63103527	chr20:63103527:G:A	rs113149575	G	A	G	Sox2_MA0143.3	19	0	+	0	0	.
chr20	63115990	63115991	chr20:63115991:G:A	rs6122093	G	A	G	Sox2_MA0143.3	1	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr20	63178911	63178912	chr20:63178912:C:T	rs67543816	C	T	C	Sox2_MA0143.3	22	0	-	0	0	.
chr20	63207038	63207039	chr20:63207039:G:A	rs149718066	G	A	G	Sox2_MA0143.3	12	0	+	0	0	.
chr20	63253613	63253614	chr20:63253614:T:G	rs1014233791	T	G	T	Sox2_MA0143.3	-13	0	+	0	0	.
chr20	63253618	63253619	chr20:63253619:A:T	rs2295539	A	T	T	Sox2_MA0143.3	-8	0	+	0	0	.
chr20	63253648	63253649	chr20:63253649:G:A	rs572197835	G	A	G	Sox2_MA0143.3	22	0	+	0	0	.
chr20	63291107	63291108	chr20:63291108:G:A	rs73329155	G	A	g	Sox2_MA0143.3	8	0	+	0	0	.
chr20	63314556	63314557	chr20:63314557:T:C	rs911067	T	C	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr20	63374211	63374212	chr20:63374212:C:T	rs116920489	C	T	c	Sox2_MA0143.3	-11	0	-	0	0	.
chr20	63380830	63380831	chr20:63380831:C:T	rs911049	C	T	C	Sox2_MA0143.3	10	0	-	0	0	.
chr20	63437550	63437551	chr20:63437551:C:T	rs6062934	C	T	T	Sox2_MA0143.3	-2	0	+	0	0	.
chr20	63483260	63483261	chr20:63483261:C:T	rs117561364	C	T	c	Sox2_MA0143.3	18	0	+	0	0	.
chr20	63494448	63494449	chr20:63494449:A:T	rs55845303	A	T	A	Sox2_MA0143.3	12	0	-	0	0	.
chr20	63519120	63519121	chr20:63519121:C:T	rs564475956	C	T	c	Sox2_MA0143.3	-6	0	-	0	0	.
chr20	63521080	63521081	chr20:63521081:C:T	chr20:63521081:C:T	C	T	c	Sox2_MA0143.3	-14	0	+	0	0	.
chr20	63580803	63580804	chr20:63580804:C:T	rs115890998	C	T	C	Sox2_MA0143.3	22	0	-	0	0	.
chr20	63588325	63588326	chr20:63588326:C:T	rs6089929	C	T	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr20	63615795	63615796	chr20:63615796:C:T	rs79241193	C	T	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr20	63675194	63675195	chr20:63675195:A:G	rs6011023	A	G	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr20	63687502	63687503	chr20:63687503:G:C	rs6062490	G	C	C	Sox2_MA0143.3	22	0	+	0	0	.
chr20	63696913	63696914	chr20:63696914:C:T	rs2257440	C	T	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr20	63730384	63730385	chr20:63730385:G:A	rs2427530	G	A	G	Sox2_MA0143.3	15	0	+	0	0	.
chr20	63784339	63784340	chr20:63784340:T:C	rs6089995	T	C	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr20	63809383	63809384	chr20:63809384:C:T	rs6011139	C	T	C	Sox2_MA0143.3	17	0	-	0	0	.
chr20	63823838	63823839	chr20:63823839:C:A	rs4809366	C	A	C	Sox2_MA0143.3	0	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr20	63850212	63850213	chr20:63850213:C:T	rs139444856	C	T	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr20	63861418	63861419	chr20:63861419:C:G	rs6011193	C	G	.	Sox2_MA0143.3	25	0	-	0	0	.
chr20	63863726	63863727	chr20:63863727:G:A	rs111614579	G	A	G	Sox2_MA0143.3	0	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr20	63979202	63979203	chr20:63979203:G:T	rs116165844	G	T	G	Sox2_MA0143.3	25	0	-	0	0	.
chr20	63979244	63979245	chr20:63979245:A:T	rs748239791	A	T	A	Sox2_MA0143.3	-17	0	-	0	0	.
chr20	64020008	64020009	chr20:64020009:G:A	rs13037583	G	A	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr20	64139274	64139275	chr20:64139275:T:C	rs1008143	T	C	T	Sox2_MA0143.3	9	0	+	0	0	.
chr20	64147225	64147226	chr20:64147226:C:T	rs113740661	C	T	C	Sox2_MA0143.3	24	0	+	0	0	.
chr20	64151444	64151445	chr20:64151445:A:G	rs6062654	A	G	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr20	64155877	64155878	chr20:64155878:G:T	rs500151	G	T	T	Sox2_MA0143.3	16	0	+	0	0	.
chr20	64160731	64160732	chr20:64160732:G:A	rs114192273	G	A	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr20	64162204	64162205	chr20:64162205:G:A	rs76012137	G	A	G	Sox2_MA0143.3	13	0	+	0	0	.
chr20	64162217	64162218	chr20:64162218:G:A	rs150949236	G	A	G	Sox2_MA0143.3	26	0	+	0	0	.
chr20	64164453	64164454	chr20:64164454:C:T	rs772583444	C	T	C	Sox2_MA0143.3	13	0	-	0	0	.
chr20	64215083	64215084	chr20:64215084:T:C	rs35478345	T	C	T	Sox2_MA0143.3	-1	0	-	0	0	.
chr21	5236921	5236922	chr21:5236922:C:G	rs1426095921	C	G	.	Sox2_MA0143.3	-14	0	-	0	0	.
chr21	7289594	7289595	chr21:7289595:G:A	rs1441497916	G	A	.	Sox2_MA0143.3	-15	0	+	0	0	.
chr21	7289957	7289958	chr21:7289958:T:C	rs1286403867	T	C	.	Sox2_MA0143.3	6	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr21	7290108	7290109	chr21:7290109:A:G	rs1469157426	A	G	.	Sox2_MA0143.3	-12	0	+	0	0	.
chr21	8763932	8763933	chr21:8763933:A:C	rs1398614385	A	C	.	Sox2_MA0143.3	-3	0	+	0	0	.
chr21	8989314	8989315	chr21:8989315:G:A	rs76786836	G	A	.	Sox2_MA0143.3	-11	0	-	0	0	.
chr21	8995249	8995250	chr21:8995250:G:A	rs75577515	G	A	.	Sox2_MA0143.3	-13	0	+	0	0	.
chr21	9001915	9001916	chr21:9001916:C:T	rs77477417	C	T	.	Sox2_MA0143.3	-5	0	+	0	0	.
chr21	9025694	9025695	chr21:9025695:G:C	chr21:9025695:G:C	G	C	g	Sox2_MA0143.3	5	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr21	9663555	9663556	chr21:9663556:C:T	rs1425773801	C	T	.	Sox2_MA0143.3	26	0	-	0	0	.
chr21	9695998	9695999	chr21:9695999:C:G	rs1475290232	C	G	.	Sox2_MA0143.3	25	0	-	0	0	.
chr21	9795375	9795376	chr21:9795376:C:G	rs1993085	C	G	.	Sox2_MA0143.3	1	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr21	9941907	9941908	chr21:9941908:T:C	rs75321973	T	C	T	Sox2_MA0143.3	3	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr21	10327740	10327741	chr21:10327741:G:A	rs8131139	G	A	.	Sox2_MA0143.3	22	0	+	0	0	.
chr21	10417136	10417137	chr21:10417137:T:A	rs10433158	T	A	T	Sox2_MA0143.3	15	0	+	0	0	.
chr21	10576247	10576248	chr21:10576248:C:T	rs7276701	C	T	c	Sox2_MA0143.3	-6	0	+	0	0	.
chr21	10598830	10598831	chr21:10598831:A:G	rs9325345	A	G	-	Sox2_MA0143.3	20	0	+	0	0	.
chr21	10663710	10663711	chr21:10663711:C:T	rs28460337	C	T	.	Sox2_MA0143.3	-19	0	+	0	0	.
chr21	10755637	10755638	chr21:10755638:A:T	rs80092997	A	T	.	Sox2_MA0143.3	-1	0	+	0	0	.
chr21	10755638	10755639	chr21:10755639:C:T	rs28879699	C	T	.	Sox2_MA0143.3	0	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr21	10758690	10758691	chr21:10758691:T:G	rs28821589	T	G	.	Sox2_MA0143.3	-16	0	-	0	0	.
chr21	10785713	10785714	chr21:10785714:G:T	chr21:10785714:G:T	G	T	.	Sox2_MA0143.3	8	0	+	0	0	.
chr21	13409376	13409377	chr21:13409377:C:A	chr21:13409377:C:A	C	A	.	Sox2_MA0143.3	-20	0	+	0	0	.
chr21	13448086	13448087	chr21:13448087:A:G	rs468843	A	G	.	Sox2_MA0143.3	-19	0	-	0	0	.
chr21	13539379	13539380	chr21:13539380:C:T	rs11702153	C	T	.	Sox2_MA0143.3	-18	0	+	0	0	.
chr21	13860096	13860097	chr21:13860097:C:T	rs143148772	C	T	.	Sox2_MA0143.3	27	0	-	0	0	.
chr21	13889095	13889096	chr21:13889096:C:A	rs76746077	C	A	.	Sox2_MA0143.3	14	0	+	0	0	.
chr21	14027448	14027449	chr21:14027449:G:A	rs185247976	G	A	N	Sox2_MA0143.3	16	0	+	0	0	.
chr21	14080531	14080532	chr21:14080532:G:C	rs35823367	G	C	g	Sox2_MA0143.3	-6	0	-	0	0	.
chr21	14092454	14092455	chr21:14092455:G:A	rs62208573	G	A	-	Sox2_MA0143.3	0	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr21	14092474	14092475	chr21:14092475:G:A	rs62208574	G	A	-	Sox2_MA0143.3	-20	0	-	0	0	.
chr21	14102365	14102366	chr21:14102366:T:C	rs2187275	T	C	c	Sox2_MA0143.3	-10	0	+	0	0	.
chr21	14102398	14102399	chr21:14102399:T:G	rs2187276	T	G	g	Sox2_MA0143.3	23	0	+	0	0	.
chr21	14103537	14103538	chr21:14103538:C:T	rs62208629	C	T	c	Sox2_MA0143.3	23	0	-	0	0	.
chr21	14361998	14361999	chr21:14361999:T:C	rs2822630	T	C	T	Sox2_MA0143.3	3	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr21	14382727	14382728	chr21:14382728:C:T	rs1207937884	C	T	c	Sox2_MA0143.3	15	0	-	0	0	.
chr21	14382728	14382729	chr21:14382729:C:T	rs55983630	C	T	c	Sox2_MA0143.3	14	0	-	0	0	.
chr21	14383826	14383827	chr21:14383827:A:G	rs1253688230	A	G	a	Sox2_MA0143.3	20	0	+	0	0	.
chr21	14482905	14482906	chr21:14482906:C:T	rs2822690	C	T	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr21	14523727	14523728	chr21:14523728:G:T	rs9984947	G	T	G	Sox2_MA0143.3	13	0	-	0	0	.
chr21	14545239	14545240	chr21:14545240:A:T	rs7277560	A	T	A	Sox2_MA0143.3	2	1	+	9.613475778572903	9.800647049772198	CCATTGTT
chr21	14576667	14576668	chr21:14576668:A:G	rs2822777	A	G	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr21	14673750	14673751	chr21:14673751:C:T	rs2045586	C	T	T	Sox2_MA0143.3	-3	0	-	0	0	.
chr21	14681857	14681858	chr21:14681858:G:C	rs995045	G	C	C	Sox2_MA0143.3	-5	0	-	0	0	.
chr21	14686923	14686924	chr21:14686924:C:G	rs117431622	C	G	C	Sox2_MA0143.3	5	1	-	9.613475778572903	2.7047209992576837	CCATTGTT
chr21	14830014	14830015	chr21:14830015:T:C	rs2822954	T	C	T	Sox2_MA0143.3	2	1	-	8.676919043985553	2.5582713367092715	CCATTGTG
chr21	14963147	14963148	chr21:14963148:T:C	rs10482863	T	C	T	Sox2_MA0143.3	-9	0	+	0	0	.
chr21	14987509	14987510	chr21:14987510:G:T	rs1475570	G	T	T	Sox2_MA0143.3	-6	0	+	0	0	.
chr21	15063935	15063936	chr21:15063936:C:T	rs73338822	C	T	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr21	15088763	15088764	chr21:15088764:T:C	rs116470330	T	C	T	Sox2_MA0143.3	16	0	-	0	0	.
chr21	15438157	15438158	chr21:15438158:T:C	rs114162544	T	C	T	Sox2_MA0143.3	-12	0	+	0	0	.
chr21	15559898	15559899	chr21:15559899:A:T	rs6517486	A	T	T	Sox2_MA0143.3	-5	0	-	0	0	.
chr21	15560695	15560696	chr21:15560696:T:C	rs8129285	T	C	C	Sox2_MA0143.3	4	1	+	9.206767037375712	2.2980122580604916	CCTTTGTC
chr21	15604786	15604787	chr21:15604787:C:G	rs73343627	C	G	C	Sox2_MA0143.3	1	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr21	16012317	16012318	chr21:16012318:C:T	rs12483563	C	T	C	Sox2_MA0143.3	23	0	+	0	0	.
chr21	16118023	16118024	chr21:16118024:C:T	rs189767355	C	T	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr21	16259314	16259315	chr21:16259315:T:G	rs1389073	T	G	T	Sox2_MA0143.3	-13	0	+	0	0	.
chr21	16259342	16259343	chr21:16259343:T:A	rs1389072	T	A	T	Sox2_MA0143.3	15	0	+	0	0	.
chr21	16280535	16280536	chr21:16280536:C:T	rs116037291	C	T	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr21	16456484	16456485	chr21:16456485:C:G	rs2155619	C	G	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr21	16561988	16561989	chr21:16561989:G:T	rs62222220	G	T	G	Sox2_MA0143.3	27	0	+	0	0	.
chr21	16606532	16606533	chr21:16606533:C:A	rs116909445	C	A	C	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr21	16748097	16748098	chr21:16748098:C:T	rs75158968	C	T	C	Sox2_MA0143.3	9	0	-	0	0	.
chr21	16806771	16806772	chr21:16806772:T:G	rs34810597	T	G	T	Sox2_MA0143.3	-8	0	-	0	0	.
chr21	17085509	17085510	chr21:17085510:A:G	rs2824226	A	G	A	Sox2_MA0143.3	6	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr21	17185766	17185767	chr21:17185767:C:T	chr21:17185767:C:T	C	T	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr21	17251140	17251141	chr21:17251141:C:T	rs181836457	C	T	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr21	17419548	17419549	chr21:17419549:C:G	rs80267658	C	G	C	Sox2_MA0143.3	0	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr21	17419572	17419573	chr21:17419573:A:G	rs1493100	A	G	A	Sox2_MA0143.3	24	0	+	0	0	.
chr21	17427428	17427429	chr21:17427429:C:T	rs13050588	C	T	C	Sox2_MA0143.3	0	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr21	17447034	17447035	chr21:17447035:C:G	rs2824303	C	G	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr21	17671838	17671839	chr21:17671839:G:A	rs73200553	G	A	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr21	17693137	17693138	chr21:17693138:A:G	rs2824447	A	G	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr21	17693157	17693158	chr21:17693158:G:A	rs79157460	G	A	G	Sox2_MA0143.3	10	0	+	0	0	.
chr21	17782248	17782249	chr21:17782249:T:C	rs243588	T	C	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr21	17964921	17964922	chr21:17964922:C:T	rs1394740	C	T	C	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr21	17964943	17964944	chr21:17964944:A:G	rs197523	A	G	A	Sox2_MA0143.3	22	0	+	0	0	.
chr21	17989994	17989995	chr21:17989995:C:T	rs150210	C	T	C	Sox2_MA0143.3	10	0	+	0	0	.
chr21	17990089	17990090	chr21:17990090:G:A	rs158012	G	A	G	Sox2_MA0143.3	20	0	+	0	0	.
chr21	18006728	18006729	chr21:18006729:G:A	rs13049303	G	A	A	Sox2_MA0143.3	-19	0	+	0	0	.
chr21	18102925	18102926	chr21:18102926:G:A	rs969578	G	A	G	Sox2_MA0143.3	22	0	-	0	0	.
chr21	18102965	18102966	chr21:18102966:T:C	rs969579	T	C	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr21	18392131	18392132	chr21:18392132:C:T	rs68017657	C	T	T	Sox2_MA0143.3	-14	0	+	0	0	.
chr21	18453744	18453745	chr21:18453745:C:A	rs77213481	C	A	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr21	18454562	18454563	chr21:18454563:G:T	rs1029945812	G	T	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr21	18489188	18489189	chr21:18489189:A:G	rs1735753	A	G	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr21	18673065	18673066	chr21:18673066:C:T	rs56335085	C	T	T	Sox2_MA0143.3	26	0	+	0	0	.
chr21	18725109	18725110	chr21:18725110:C:T	rs2825046	C	T	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr21	18839532	18839533	chr21:18839533:G:T	rs12626702	G	T	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr21	18840407	18840408	chr21:18840408:A:T	rs2212864	A	T	T	Sox2_MA0143.3	8	0	+	0	0	.
chr21	18877785	18877786	chr21:18877786:T:C	rs9637060	T	C	T	Sox2_MA0143.3	-4	0	-	0	0	.
chr21	18918921	18918922	chr21:18918922:G:A	rs117209879	G	A	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr21	19047676	19047677	chr21:19047677:T:A	rs12482051	T	A	T	Sox2_MA0143.3	-10	0	-	0	0	.
chr21	19197877	19197878	chr21:19197878:A:T	rs2226412	A	T	T	Sox2_MA0143.3	-8	0	-	0	0	.
chr21	20110544	20110545	chr21:20110545:C:T	rs67758328	C	T	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr21	20530148	20530149	chr21:20530149:C:T	rs2826352	C	T	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr21	20574592	20574593	chr21:20574593:G:A	rs1257293961	G	A	G	Sox2_MA0143.3	26	0	+	0	0	.
chr21	20646408	20646409	chr21:20646409:C:A	rs2897773	C	A	C	Sox2_MA0143.3	17	0	+	0	0	.
chr21	20852056	20852057	chr21:20852057:T:G	rs9305977	T	G	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr21	21076511	21076512	chr21:21076512:C:T	rs146452218	C	T	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr21	21122773	21122774	chr21:21122774:T:G	chr21:21122774:T:G	T	G	T	Sox2_MA0143.3	-4	0	+	0	0	.
chr21	21122778	21122779	chr21:21122779:C:G	chr21:21122779:C:G	C	G	C	Sox2_MA0143.3	1	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr21	21362088	21362089	chr21:21362089:T:C	rs232496	T	C	T	Sox2_MA0143.3	4	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr21	21457310	21457311	chr21:21457311:T:C	rs4586719	T	C	t	Sox2_MA0143.3	14	0	-	0	0	.
chr21	21457311	21457312	chr21:21457312:G:A	rs13051144	G	A	G	Sox2_MA0143.3	13	0	-	0	0	.
chr21	21612614	21612615	chr21:21612615:C:A	rs967337398	C	A	C	Sox2_MA0143.3	23	0	+	0	0	.
chr21	21987494	21987495	chr21:21987495:T:C	rs2827188	T	C	T	Sox2_MA0143.3	20	0	-	0	0	.
chr21	22289702	22289703	chr21:22289703:C:T	rs2827347	C	T	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr21	22293149	22293150	chr21:22293150:T:G	rs717978	T	G	T	Sox2_MA0143.3	-19	0	-	0	0	.
chr21	22575255	22575256	chr21:22575256:G:T	rs1405763	G	T	G	Sox2_MA0143.3	0	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr21	22618438	22618439	chr21:22618439:G:A	rs8127505	G	A	G	Sox2_MA0143.3	17	0	-	0	0	.
chr21	23162981	23162982	chr21:23162982:A:G	rs188571267	A	G	A	Sox2_MA0143.3	-4	0	+	0	0	.
chr21	23299252	23299253	chr21:23299253:T:C	rs7276238	T	C	T	Sox2_MA0143.3	-14	0	+	0	0	.
chr21	23488741	23488742	chr21:23488742:A:T	rs2257105	A	T	T	Sox2_MA0143.3	-5	0	+	0	0	.
chr21	23645725	23645726	chr21:23645726:G:A	rs204398	G	A	G	Sox2_MA0143.3	23	0	+	0	0	.
chr21	23859000	23859001	chr21:23859001:G:A	rs117410326	G	A	G	Sox2_MA0143.3	11	0	-	0	0	.
chr21	23859024	23859025	chr21:23859025:C:T	rs2828558	C	T	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr21	24123600	24123601	chr21:24123601:T:C	rs2828844	T	C	t	Sox2_MA0143.3	18	0	-	0	0	.
chr21	24134043	24134044	chr21:24134044:A:T	rs2828848	A	T	T	Sox2_MA0143.3	25	0	+	0	0	.
chr21	24189255	24189256	chr21:24189256:T:C	rs1910621	T	C	T	Sox2_MA0143.3	4	1	+	8.676919043985553	1.7681642646703322	CCATTGTG
chr21	24197296	24197297	chr21:24197297:C:T	rs2828906	C	T	C	Sox2_MA0143.3	12	0	+	0	0	.
chr21	24637126	24637127	chr21:24637127:G:A	rs7348963	G	A	N	Sox2_MA0143.3	-11	0	+	0	0	.
chr21	24758327	24758328	chr21:24758328:A:T	rs73898826	A	T	A	Sox2_MA0143.3	17	0	+	0	0	.
chr21	24896609	24896610	chr21:24896610:G:A	rs11087936	G	A	A	Sox2_MA0143.3	9	0	-	0	0	.
chr21	25014130	25014131	chr21:25014131:C:G	rs2829508	C	G	C	Sox2_MA0143.3	15	0	-	0	0	.
chr21	25056825	25056826	chr21:25056826:A:T	rs140273078	A	T	A	Sox2_MA0143.3	26	0	-	0	0	.
chr21	25179294	25179295	chr21:25179295:T:C	rs2829607	T	C	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr21	25191228	25191229	chr21:25191229:C:A	rs2829619	C	A	A	Sox2_MA0143.3	5	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr21	25445628	25445629	chr21:25445629:C:G	rs28884314	C	G	C	Sox2_MA0143.3	27	0	+	0	0	.
chr21	25450534	25450535	chr21:25450535:G:C	rs7283105	G	C	G	Sox2_MA0143.3	25	0	+	0	0	.
chr21	25564005	25564006	chr21:25564006:A:G	rs113558557	A	G	A	Sox2_MA0143.3	19	0	-	0	0	.
chr21	25593318	25593319	chr21:25593319:T:C	rs2829810	T	C	T	Sox2_MA0143.3	18	0	-	0	0	.
chr21	25593326	25593327	chr21:25593327:A:G	rs74468704	A	G	A	Sox2_MA0143.3	10	0	-	0	0	.
chr21	25649290	25649291	chr21:25649291:T:A	rs8126538	T	A	A	Sox2_MA0143.3	-20	0	-	0	0	.
chr21	25664878	25664879	chr21:25664879:A:G	rs2409148	A	G	A	Sox2_MA0143.3	-14	0	+	0	0	.
chr21	25837699	25837700	chr21:25837700:C:T	rs149080920	C	T	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr21	25870257	25870258	chr21:25870258:A:T	rs56117618	A	T	T	Sox2_MA0143.3	2	1	-	3.5547341015215945	3.3675628303222993	CCTTTGTA
chr21	25888498	25888499	chr21:25888499:A:G	rs1876064	A	G	G	Sox2_MA0143.3	19	0	-	0	0	.
chr21	25998248	25998249	chr21:25998249:A:T	rs150716231	A	T	A	Sox2_MA0143.3	-9	0	+	0	0	.
chr21	25998318	25998319	chr21:25998319:T:C	rs139128431	T	C	T	Sox2_MA0143.3	27	0	+	0	0	.
chr21	26079120	26079121	chr21:26079121:A:T	rs2830043	A	T	A	Sox2_MA0143.3	20	0	-	0	0	.
chr21	26128824	26128825	chr21:26128825:T:C	rs2830073	T	C	T	Sox2_MA0143.3	20	0	+	0	0	.
chr21	26140452	26140453	chr21:26140453:G:A	rs139015867	G	A	G	Sox2_MA0143.3	-16	0	-	0	0	.
chr21	26195137	26195138	chr21:26195138:T:C	rs116805360	T	C	T	Sox2_MA0143.3	26	0	-	0	0	.
chr21	26195161	26195162	chr21:26195162:A:G	rs114921032	A	G	A	Sox2_MA0143.3	2	1	-	9.206767037375712	2.900948058900136	CCTTTGTC
chr21	26235606	26235607	chr21:26235607:T:C	chr21:26235607:T:C	T	C	T	Sox2_MA0143.3	-16	0	+	0	0	.
chr21	26366087	26366088	chr21:26366088:C:T	rs62219377	C	T	T	Sox2_MA0143.3	22	0	+	0	0	.
chr21	26518011	26518012	chr21:26518012:G:A	rs369515	G	A	G	Sox2_MA0143.3	-3	0	+	0	0	.
chr21	26528985	26528986	chr21:26528986:C:T	rs73180806	C	T	C	Sox2_MA0143.3	21	0	-	0	0	.
chr21	26573481	26573482	chr21:26573482:C:T	rs11909726	C	T	C	Sox2_MA0143.3	12	0	-	0	0	.
chr21	26674787	26674788	chr21:26674788:G:T	rs226291	G	T	G	Sox2_MA0143.3	20	0	-	0	0	.
chr21	26717611	26717612	chr21:26717612:T:C	rs2830432	T	C	T	Sox2_MA0143.3	-17	0	+	0	0	.
chr21	26763340	26763341	chr21:26763341:C:T	rs73183702	C	T	C	Sox2_MA0143.3	-20	0	-	0	0	.
chr21	26795770	26795771	chr21:26795771:A:G	rs2830531	A	G	A	Sox2_MA0143.3	9	0	-	0	0	.
chr21	26810307	26810308	chr21:26810308:A:C	rs455317	A	C	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr21	26810346	26810347	chr21:26810347:C:T	rs7279842	C	T	C	Sox2_MA0143.3	27	0	+	0	0	.
chr21	26846609	26846610	chr21:26846610:G:A	rs903524327	G	A	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr21	26963854	26963855	chr21:26963855:A:G	rs9636791	A	G	A	Sox2_MA0143.3	11	0	+	0	0	.
chr21	26999309	26999310	chr21:26999310:G:A	rs77335564	G	A	G	Sox2_MA0143.3	1	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr21	27105629	27105630	chr21:27105630:C:T	rs9977974	C	T	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr21	27111041	27111042	chr21:27111042:C:T	rs2830701	C	T	T	Sox2_MA0143.3	9	0	-	0	0	.
chr21	27202335	27202336	chr21:27202336:A:G	rs914132	A	G	A	Sox2_MA0143.3	8	0	-	0	0	.
chr21	27206440	27206441	chr21:27206441:T:G	rs12626327	T	G	T	Sox2_MA0143.3	-7	0	-	0	0	.
chr21	27206453	27206454	chr21:27206454:G:C	rs7279088	G	C	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr21	27215505	27215506	chr21:27215506:T:C	rs9981303	T	C	T	Sox2_MA0143.3	-16	0	+	0	0	.
chr21	27364055	27364056	chr21:27364056:A:G	rs34495779	A	G	A	Sox2_MA0143.3	2	1	+	9.613475778572903	3.494828071296623	CCATTGTT
chr21	27552601	27552602	chr21:27552602:C:G	rs4817179	C	G	G	Sox2_MA0143.3	24	0	+	0	0	.
chr21	27719389	27719390	chr21:27719390:A:G	rs79573136	A	G	A	Sox2_MA0143.3	-6	0	-	0	0	.
chr21	27894494	27894495	chr21:27894495:G:T	rs2831235	G	T	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr21	27949253	27949254	chr21:27949254:A:G	rs144530109	A	G	a	Sox2_MA0143.3	21	0	-	0	0	.
chr21	28007608	28007609	chr21:28007609:T:A	rs1964798	T	A	T	Sox2_MA0143.3	-18	0	+	0	0	.
chr21	28039704	28039705	chr21:28039705:G:C	rs112608443	G	C	g	Sox2_MA0143.3	22	0	-	0	0	.
chr21	28177260	28177261	chr21:28177261:T:C	rs17678121	T	C	c	Sox2_MA0143.3	6	1	+	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr21	28334002	28334003	chr21:28334003:G:A	rs115601741	G	A	G	Sox2_MA0143.3	26	0	+	0	0	.
chr21	28419986	28419987	chr21:28419987:A:G	rs2831792	A	G	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr21	28517227	28517228	chr21:28517228:G:A	rs185255129	G	A	A	Sox2_MA0143.3	-2	0	-	0	0	.
chr21	28550067	28550068	chr21:28550068:G:T	rs977689	G	T	T	Sox2_MA0143.3	-14	0	-	0	0	.
chr21	28600124	28600125	chr21:28600125:T:C	rs9980124	T	C	T	Sox2_MA0143.3	-7	0	-	0	0	.
chr21	28656696	28656697	chr21:28656697:C:G	rs60543880	C	G	C	Sox2_MA0143.3	16	0	-	0	0	.
chr21	28684187	28684188	chr21:28684188:T:C	rs75977629	T	C	T	Sox2_MA0143.3	18	0	+	0	0	.
chr21	28762011	28762012	chr21:28762012:T:C	rs2832061	T	C	T	Sox2_MA0143.3	-6	0	+	0	0	.
chr21	28776575	28776576	chr21:28776576:G:A	rs144625650	G	A	g	Sox2_MA0143.3	25	0	-	0	0	.
chr21	28776604	28776605	chr21:28776605:A:G	rs59861227	A	G	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr21	28850149	28850150	chr21:28850150:A:G	rs8128470	A	G	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr21	28858379	28858380	chr21:28858380:A:T	rs7282257	A	T	T	Sox2_MA0143.3	-12	0	+	0	0	.
chr21	28922092	28922093	chr21:28922093:C:G	rs2256280	C	G	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr21	29059408	29059409	chr21:29059409:A:G	rs2243521	A	G	A	Sox2_MA0143.3	-12	0	+	0	0	.
chr21	29092717	29092718	chr21:29092718:C:T	rs3746845	C	T	T	Sox2_MA0143.3	-9	0	-	0	0	.
chr21	29100115	29100116	chr21:29100116:T:G	rs750866250	T	G	T	Sox2_MA0143.3	-11	0	+	0	0	.
chr21	29181869	29181870	chr21:29181870:T:G	rs147451073	T	G	T	Sox2_MA0143.3	-10	0	+	0	0	.
chr21	29181906	29181907	chr21:29181907:T:C	chr21:29181907:T:C	T	C	T	Sox2_MA0143.3	27	0	+	0	0	.
chr21	29257964	29257965	chr21:29257965:C:T	rs111263782	C	T	C	Sox2_MA0143.3	22	0	+	0	0	.
chr21	29299533	29299534	chr21:29299534:G:T	rs75489207	G	T	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr21	29373293	29373294	chr21:29373294:C:T	rs16984019	C	T	C	Sox2_MA0143.3	26	0	-	0	0	.
chr21	29373294	29373295	chr21:29373295:G:A	rs17750460	G	A	G	Sox2_MA0143.3	25	0	-	0	0	.
chr21	29961736	29961737	chr21:29961737:T:C	chr21:29961737:T:C	T	C	T	Sox2_MA0143.3	-13	0	+	0	0	.
chr21	30004343	30004344	chr21:30004344:C:A	rs17203484	C	A	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr21	30102923	30102924	chr21:30102924:T:C	rs2832618	T	C	T	Sox2_MA0143.3	-19	0	+	0	0	.
chr21	30312549	30312550	chr21:30312550:A:G	rs13051859	A	G	A	Sox2_MA0143.3	23	0	+	0	0	.
chr21	30714743	30714744	chr21:30714744:G:A	rs2833020	G	A	A	Sox2_MA0143.3	-11	0	-	0	0	.
chr21	30881193	30881194	chr21:30881194:A:T	rs9636845	A	T	A	Sox2_MA0143.3	17	0	-	0	0	.
chr21	30957054	30957055	chr21:30957055:T:A	rs9978875	T	A	.	Sox2_MA0143.3	-4	0	+	0	0	.
chr21	31062446	31062447	chr21:31062447:C:T	rs2070405	C	T	T	Sox2_MA0143.3	-17	0	-	0	0	.
chr21	31099228	31099229	chr21:31099229:A:C	rs138311782	A	C	A	Sox2_MA0143.3	-8	0	+	0	0	.
chr21	31115598	31115599	chr21:31115599:C:T	rs2833272	C	T	C	Sox2_MA0143.3	10	0	+	0	0	.
chr21	31132644	31132645	chr21:31132645:T:C	rs116257503	T	C	T	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr21	31133230	31133231	chr21:31133231:G:A	rs115342460	G	A	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr21	31316387	31316388	chr21:31316388:C:G	rs845966	C	G	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr21	31355016	31355017	chr21:31355017:G:T	rs185988711	G	T	G	Sox2_MA0143.3	5	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr21	31387933	31387934	chr21:31387934:C:T	rs11909747	C	T	C	Sox2_MA0143.3	19	0	-	0	0	.
chr21	31484535	31484536	chr21:31484536:G:A	rs1557279	G	A	A	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr21	31486439	31486440	chr21:31486440:C:T	rs8127508	C	T	C	Sox2_MA0143.3	14	0	-	0	0	.
chr21	31500409	31500410	chr21:31500410:T:G	rs557849591	T	G	T	Sox2_MA0143.3	-20	0	+	0	0	.
chr21	31672094	31672095	chr21:31672095:A:G	rs73201506	A	G	A	Sox2_MA0143.3	7	1	-	9.800647049772198	9.206767037375712	CCTTTGTT
chr21	31732493	31732494	chr21:31732494:G:T	rs754116247	G	T	G	Sox2_MA0143.3	10	0	-	0	0	.
chr21	31732517	31732518	chr21:31732518:C:T	chr21:31732518:C:T	C	T	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr21	31876390	31876391	chr21:31876391:A:G	rs2833546	A	G	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr21	31896207	31896208	chr21:31896208:C:G	rs138293809	C	G	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr21	31896209	31896210	chr21:31896210:A:G	rs142660043	A	G	A	Sox2_MA0143.3	-5	0	+	0	0	.
chr21	31909432	31909433	chr21:31909433:T:C	rs116696178	T	C	T	Sox2_MA0143.3	-10	0	+	0	0	.
chr21	31909439	31909440	chr21:31909440:C:T	rs114601777	C	T	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr21	31909442	31909443	chr21:31909443:C:A	rs34037768	C	A	A	Sox2_MA0143.3	0	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr21	31994233	31994234	chr21:31994234:A:G	rs9978615	A	G	G	Sox2_MA0143.3	8	0	+	0	0	.
chr21	32073758	32073759	chr21:32073759:A:T	rs2012993	A	T	T	Sox2_MA0143.3	-4	0	+	0	0	.
chr21	32147137	32147138	chr21:32147138:C:T	rs1041744	C	T	C	Sox2_MA0143.3	7	1	+	9.019595766176417	9.613475778572903	CCATTGTC
chr21	32191984	32191985	chr21:32191985:C:T	rs12483069	C	T	C	Sox2_MA0143.3	26	0	-	0	0	.
chr21	32192400	32192401	chr21:32192401:C:T	rs78098177	C	T	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr21	32192408	32192409	chr21:32192409:T:G	rs2833716	T	G	T	Sox2_MA0143.3	-8	0	+	0	0	.
chr21	32193297	32193298	chr21:32193298:G:A	rs79454212	G	A	G	Sox2_MA0143.3	1	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr21	32256443	32256444	chr21:32256444:A:G	rs2070374	A	G	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr21	32278388	32278389	chr21:32278389:A:G	rs368613094	A	G	A	Sox2_MA0143.3	-20	0	+	0	0	.
chr21	32383889	32383890	chr21:32383890:G:T	rs2833796	G	T	G	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr21	32409821	32409822	chr21:32409822:T:C	rs9981025	T	C	T	Sox2_MA0143.3	21	0	+	0	0	.
chr21	32449315	32449316	chr21:32449316:G:A	rs9983567	G	A	A	Sox2_MA0143.3	7	1	+	8.676919043985553	3.3675628303222993	CCATTGTG
chr21	32470482	32470483	chr21:32470483:G:A	rs7276504	G	A	-	Sox2_MA0143.3	-15	0	+	0	0	.
chr21	32490935	32490936	chr21:32490936:C:T	rs1892654	C	T	C	Sox2_MA0143.3	12	0	+	0	0	.
chr21	32544854	32544855	chr21:32544855:T:G	rs2833875	T	G	T	Sox2_MA0143.3	17	0	-	0	0	.
chr21	32549948	32549949	chr21:32549949:C:T	rs2833882	C	T	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr21	32898827	32898828	chr21:32898828:G:C	rs2833997	G	C	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr21	32977700	32977701	chr21:32977701:C:T	rs192639418	C	T	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr21	32978454	32978455	chr21:32978455:G:T	rs111501449	G	T	G	Sox2_MA0143.3	11	0	-	0	0	.
chr21	33079018	33079019	chr21:33079019:C:A	rs574859271	C	A	C	Sox2_MA0143.3	22	0	-	0	0	.
chr21	33200485	33200486	chr21:33200486:G:A	rs2834136	G	A	G	Sox2_MA0143.3	-11	0	+	0	0	.
chr21	33204614	33204615	chr21:33204615:A:G	rs35266960	A	G	a	Sox2_MA0143.3	-9	0	+	0	0	.
chr21	33208727	33208728	chr21:33208728:C:T	rs2186355	C	T	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr21	33212238	33212239	chr21:33212239:T:C	rs11088242	T	C	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr21	33237290	33237291	chr21:33237291:T:G	rs1137779	T	G	G	Sox2_MA0143.3	6	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr21	33253107	33253108	chr21:33253108:A:G	rs2236758	A	G	G	Sox2_MA0143.3	-9	0	+	0	0	.
chr21	33332137	33332138	chr21:33332138:G:A	rs16990552	G	A	A	Sox2_MA0143.3	-20	0	+	0	0	.
chr21	33379914	33379915	chr21:33379915:G:A	rs115690345	G	A	A	Sox2_MA0143.3	-12	0	-	0	0	.
chr21	33473093	33473094	chr21:33473094:C:G	rs4817574	C	G	G	Sox2_MA0143.3	20	0	-	0	0	.
chr21	33482010	33482011	chr21:33482011:G:A	rs146642406	G	A	G	Sox2_MA0143.3	-16	0	-	0	0	.
chr21	33827575	33827576	chr21:33827576:A:G	rs2834268	A	G	A	Sox2_MA0143.3	3	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr21	33847696	33847697	chr21:33847697:C:T	rs2834278	C	T	C	Sox2_MA0143.3	25	0	-	0	0	.
chr21	33916253	33916254	chr21:33916254:C:T	rs2239565	C	T	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr21	33948697	33948698	chr21:33948698:G:T	rs141144874	G	T	g	Sox2_MA0143.3	-1	0	+	0	0	.
chr21	34067413	34067414	chr21:34067414:G:A	rs13047864	G	A	G	Sox2_MA0143.3	12	0	+	0	0	.
chr21	34074984	34074985	chr21:34074985:T:C	rs1056041776	T	C	T	Sox2_MA0143.3	23	0	+	0	0	.
chr21	34128996	34128997	chr21:34128997:C:T	rs7276927	C	T	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr21	34129031	34129032	chr21:34129032:C:T	rs547238675	C	T	C	Sox2_MA0143.3	22	0	+	0	0	.
chr21	34195685	34195686	chr21:34195686:C:G	rs79728480	C	G	C	Sox2_MA0143.3	0	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr21	34278989	34278990	chr21:34278990:T:C	rs8132042	T	C	T	Sox2_MA0143.3	26	0	-	0	0	.
chr21	34340012	34340013	chr21:34340013:T:C	rs2834458	T	C	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr21	34340021	34340022	chr21:34340022:C:T	rs12626741	C	T	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr21	34545568	34545569	chr21:34545569:A:G	rs544790645	A	G	A	Sox2_MA0143.3	-8	0	+	0	0	.
chr21	34553178	34553179	chr21:34553179:A:G	rs2247992	A	G	A	Sox2_MA0143.3	23	0	-	0	0	.
chr21	34596752	34596753	chr21:34596753:G:A	rs117825137	G	A	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr21	34684862	34684863	chr21:34684863:C:A	rs2834576	C	A	A	Sox2_MA0143.3	16	0	-	0	0	.
chr21	34696097	34696098	chr21:34696098:G:A	rs972618218	G	A	G	Sox2_MA0143.3	-12	0	+	0	0	.
chr21	34755768	34755769	chr21:34755769:G:A	rs7278642	G	A	G	Sox2_MA0143.3	1	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr21	34771709	34771710	chr21:34771710:C:T	rs73362806	C	T	C	Sox2_MA0143.3	18	0	-	0	0	.
chr21	34837352	34837353	chr21:34837353:G:A	rs2834649	G	A	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr21	34902350	34902351	chr21:34902351:A:G	rs7283379	A	G	A	Sox2_MA0143.3	26	0	-	0	0	.
chr21	34910523	34910524	chr21:34910524:T:C	rs73373771	T	C	T	Sox2_MA0143.3	13	0	+	0	0	.
chr21	34934421	34934422	chr21:34934422:T:G	rs2834678	T	G	G	Sox2_MA0143.3	26	0	-	0	0	.
chr21	34937001	34937002	chr21:34937002:G:A	rs77171147	G	A	G	Sox2_MA0143.3	11	0	-	0	0	.
chr21	34969775	34969776	chr21:34969776:C:A	rs66816131	C	A	A	Sox2_MA0143.3	5	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr21	34983306	34983307	chr21:34983307:A:G	rs1044534179	A	G	A	Sox2_MA0143.3	4	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr21	34983308	34983309	chr21:34983309:T:C	rs149419080	T	C	T	Sox2_MA0143.3	2	1	-	9.019595766176417	2.900948058900136	CCATTGTC
chr21	34987061	34987062	chr21:34987062:C:T	rs1228006813	C	T	C	Sox2_MA0143.3	17	0	-	0	0	.
chr21	34987094	34987095	chr21:34987095:G:A	rs2834716	G	A	G	Sox2_MA0143.3	-16	0	-	0	0	.
chr21	35007573	35007574	chr21:35007574:C:G	rs11700551	C	G	C	Sox2_MA0143.3	14	0	+	0	0	.
chr21	35034252	35034253	chr21:35034253:T:C	rs9980210	T	C	T	Sox2_MA0143.3	3	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr21	35046303	35046304	chr21:35046304:T:C	rs9978978	T	C	T	Sox2_MA0143.3	-12	0	-	0	0	.
chr21	35064871	35064872	chr21:35064872:G:A	rs2834746	G	A	G	Sox2_MA0143.3	21	0	-	0	0	.
chr21	35073241	35073242	chr21:35073242:C:T	rs7280540	C	T	c	Sox2_MA0143.3	15	0	+	0	0	.
chr21	35085098	35085099	chr21:35085099:T:A	rs150254706	T	A	T	Sox2_MA0143.3	-12	0	-	0	0	.
chr21	35135733	35135734	chr21:35135734:A:C	rs2007324	A	C	C	Sox2_MA0143.3	11	0	+	0	0	.
chr21	35147724	35147725	chr21:35147725:T:C	rs9305562	T	C	T	Sox2_MA0143.3	16	0	-	0	0	.
chr21	35575616	35575617	chr21:35575617:A:G	rs144536767	A	G	G	Sox2_MA0143.3	20	0	-	0	0	.
chr21	35598715	35598716	chr21:35598716:A:G	rs2835025	A	G	G	Sox2_MA0143.3	14	0	+	0	0	.
chr21	35628357	35628358	chr21:35628358:G:A	rs2835049	G	A	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr21	35745570	35745571	chr21:35745571:C:A	rs2835118	C	A	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr21	35834090	35834091	chr21:35834091:G:A	rs74276113	G	A	G	Sox2_MA0143.3	1	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr21	36010928	36010929	chr21:36010929:C:A	rs7277791	C	A	C	Sox2_MA0143.3	0	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr21	36047346	36047347	chr21:36047347:C:A	rs2835252	C	A	c	Sox2_MA0143.3	13	0	-	0	0	.
chr21	36080620	36080621	chr21:36080621:T:C	rs2835272	T	C	T	Sox2_MA0143.3	12	0	-	0	0	.
chr21	36098036	36098037	chr21:36098037:C:T	rs11088335	C	T	C	Sox2_MA0143.3	17	0	+	0	0	.
chr21	36104631	36104632	chr21:36104632:C:T	rs116961035	C	T	C	Sox2_MA0143.3	16	0	+	0	0	.
chr21	36124774	36124775	chr21:36124775:C:T	rs35420403	C	T	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr21	36157322	36157323	chr21:36157323:A:C	rs13047908	A	C	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr21	36239593	36239594	chr21:36239594:G:A	rs2845756	G	A	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr21	36247941	36247942	chr21:36247942:T:G	rs2239571	T	G	T	Sox2_MA0143.3	-3	0	+	0	0	.
chr21	36268665	36268666	chr21:36268666:C:T	rs35889693	C	T	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr21	36307165	36307166	chr21:36307166:T:C	rs147298524	T	C	T	Sox2_MA0143.3	-8	0	-	0	0	.
chr21	36309420	36309421	chr21:36309421:A:C	rs181596491	A	C	A	Sox2_MA0143.3	2	1	+	9.019595766176417	2.900948058900136	CCATTGTC
chr21	36475190	36475191	chr21:36475191:G:A	rs219752	G	A	G	Sox2_MA0143.3	0	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr21	36483461	36483462	chr21:36483462:G:A	rs9636632	G	A	A	Sox2_MA0143.3	11	0	+	0	0	.
chr21	36579805	36579806	chr21:36579806:C:A	rs432706	C	A	C	Sox2_MA0143.3	20	0	-	0	0	.
chr21	36589277	36589278	chr21:36589278:T:C	rs182834564	T	C	T	Sox2_MA0143.3	3	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr21	36636156	36636157	chr21:36636157:C:T	rs6517369	C	T	T	Sox2_MA0143.3	-12	0	-	0	0	.
chr21	36636164	36636165	chr21:36636165:G:A	rs6517370	G	A	A	Sox2_MA0143.3	-20	0	-	0	0	.
chr21	36638033	36638034	chr21:36638034:C:T	rs1008434	C	T	T	Sox2_MA0143.3	-2	0	-	0	0	.
chr21	36703324	36703325	chr21:36703325:A:T	rs875225	A	T	T	Sox2_MA0143.3	12	0	+	0	0	.
chr21	36703339	36703340	chr21:36703340:T:C	rs915753	T	C	T	Sox2_MA0143.3	27	0	+	0	0	.
chr21	36791020	36791021	chr21:36791021:T:C	rs8132225	T	C	C	Sox2_MA0143.3	4	1	+	9.800647049772198	2.8918922704569785	CCTTTGTT
chr21	36861597	36861598	chr21:36861598:T:C	rs59639440	T	C	C	Sox2_MA0143.3	24	0	+	0	0	.
chr21	36873517	36873518	chr21:36873518:T:C	rs12627285	T	C	T	Sox2_MA0143.3	-16	0	+	0	0	.
chr21	36889576	36889577	chr21:36889577:G:A	rs114672451	G	A	G	Sox2_MA0143.3	21	0	-	0	0	.
chr21	36965564	36965565	chr21:36965565:G:T	rs73901979	G	T	G	Sox2_MA0143.3	-3	0	-	0	0	.
chr21	37073667	37073668	chr21:37073668:C:T	rs75566647	C	T	C	Sox2_MA0143.3	8	0	+	0	0	.
chr21	37159309	37159310	chr21:37159310:G:A	chr21:37159310:G:A	G	A	G	Sox2_MA0143.3	-5	0	+	0	0	.
chr21	37245329	37245330	chr21:37245330:C:T	rs1888465	C	T	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr21	37258558	37258559	chr21:37258559:T:C	rs764156	T	C	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr21	37282922	37282923	chr21:37282923:C:T	rs181173166	C	T	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr21	37368891	37368892	chr21:37368892:A:T	chr21:37368892:A:T	A	T	A	Sox2_MA0143.3	-5	0	+	0	0	.
chr21	37536804	37536805	chr21:37536805:T:C	rs9984811	T	C	T	Sox2_MA0143.3	17	0	-	0	0	.
chr21	37593174	37593175	chr21:37593175:C:G	rs12482516	C	G	G	Sox2_MA0143.3	-3	0	+	0	0	.
chr21	37711006	37711007	chr21:37711007:G:A	rs2835907	G	A	G	Sox2_MA0143.3	27	0	-	0	0	.
chr21	37763990	37763991	chr21:37763991:T:C	rs13052260	T	C	T	Sox2_MA0143.3	24	0	+	0	0	.
chr21	37763993	37763994	chr21:37763994:C:T	rs13051441	C	T	t	Sox2_MA0143.3	27	0	+	0	0	.
chr21	37819595	37819596	chr21:37819596:A:C	rs2835988	A	C	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr21	37868613	37868614	chr21:37868614:G:A	rs57558558	G	A	G	Sox2_MA0143.3	23	0	-	0	0	.
chr21	37879298	37879299	chr21:37879299:T:C	rs928765	T	C	C	Sox2_MA0143.3	26	0	-	0	0	.
chr21	37880397	37880398	chr21:37880398:G:A	rs3787862	G	A	A	Sox2_MA0143.3	12	0	-	0	0	.
chr21	37889687	37889688	chr21:37889688:T:A	rs60745813	T	A	T	Sox2_MA0143.3	6	1	+	9.206767037375712	2.298012258060492	CCTTTGTC
chr21	37969256	37969257	chr21:37969257:C:T	rs2836072	C	T	T	Sox2_MA0143.3	10	0	-	0	0	.
chr21	38077819	38077820	chr21:38077820:G:A	rs772971738	G	A	A	Sox2_MA0143.3	-4	0	-	0	0	.
chr21	38170879	38170880	chr21:38170880:A:G	rs2836178	A	G	A	Sox2_MA0143.3	6	1	-	8.676919043985553	1.7681642646703326	CCATTGTG
chr21	38170888	38170889	chr21:38170889:C:G	rs8129599	C	G	G	Sox2_MA0143.3	-3	0	-	0	0	.
chr21	38224156	38224157	chr21:38224157:G:C	rs11908824	G	C	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr21	38267196	38267197	chr21:38267197:C:T	rs745320244	C	T	c	Sox2_MA0143.3	-2	0	+	0	0	.
chr21	38267197	38267198	chr21:38267198:G:A	rs1281409214	G	A	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr21	38277170	38277171	chr21:38277171:C:T	rs1041721	C	T	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr21	38277971	38277972	chr21:38277972:A:G	rs61544021	A	G	A	Sox2_MA0143.3	-13	0	-	0	0	.
chr21	38357044	38357045	chr21:38357045:C:G	rs113343388	C	G	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr21	38388838	38388839	chr21:38388839:G:T	rs77216355	G	T	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr21	38423279	38423280	chr21:38423280:T:G	rs3746880	T	G	T	Sox2_MA0143.3	24	0	-	0	0	.
chr21	38424380	38424381	chr21:38424381:G:A	rs77720721	G	A	G	Sox2_MA0143.3	26	0	+	0	0	.
chr21	38444787	38444788	chr21:38444788:G:T	rs73215924	G	T	G	Sox2_MA0143.3	24	0	-	0	0	.
chr21	38444898	38444899	chr21:38444899:C:T	rs2836406	C	T	C	Sox2_MA0143.3	19	0	+	0	0	.
chr21	38460200	38460201	chr21:38460201:G:A	rs541241228	G	A	G	Sox2_MA0143.3	-16	0	-	0	0	.
chr21	38486286	38486287	chr21:38486287:G:A	rs11700443	G	A	G	Sox2_MA0143.3	7	1	+	8.676919043985553	3.3675628303222993	CCATTGTG
chr21	38532139	38532140	chr21:38532140:C:T	rs1888473	C	T	T	Sox2_MA0143.3	13	0	-	0	0	.
chr21	38596557	38596558	chr21:38596558:G:A	rs2836550	G	A	G	Sox2_MA0143.3	17	0	+	0	0	.
chr21	38646714	38646715	chr21:38646715:A:G	rs2836591	A	G	G	Sox2_MA0143.3	22	0	-	0	0	.
chr21	38679522	38679523	chr21:38679523:A:G	rs2836619	A	G	A	Sox2_MA0143.3	-19	0	+	0	0	.
chr21	38679567	38679568	chr21:38679568:T:C	rs566580910	T	C	T	Sox2_MA0143.3	26	0	+	0	0	.
chr21	38767931	38767932	chr21:38767932:A:G	rs2836678	A	G	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr21	38770929	38770930	chr21:38770930:T:C	rs2156422	T	C	T	Sox2_MA0143.3	23	0	-	0	0	.
chr21	38788150	38788151	chr21:38788151:G:C	rs76706821	G	C	G	Sox2_MA0143.3	20	0	-	0	0	.
chr21	38788678	38788679	chr21:38788679:A:G	rs115531256	A	G	A	Sox2_MA0143.3	-9	0	-	0	0	.
chr21	38800571	38800572	chr21:38800572:A:G	rs8133056	A	G	A	Sox2_MA0143.3	-4	0	+	0	0	.
chr21	38808473	38808474	chr21:38808474:G:A	rs548863871	G	A	G	Sox2_MA0143.3	-9	0	+	0	0	.
chr21	38809841	38809842	chr21:38809842:A:G	rs1209954	A	G	G	Sox2_MA0143.3	2	1	+	8.676919043985553	2.5582713367092715	CCATTGTG
chr21	38853028	38853029	chr21:38853029:G:A	rs460475	G	A	G	Sox2_MA0143.3	24	0	+	0	0	.
chr21	38853240	38853241	chr21:38853241:A:G	rs140173148	A	G	A	Sox2_MA0143.3	-2	0	-	0	0	.
chr21	38860509	38860510	chr21:38860510:C:T	rs465214	C	T	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr21	38873530	38873531	chr21:38873531:C:T	rs387721	C	T	T	Sox2_MA0143.3	17	0	+	0	0	.
chr21	38906852	38906853	chr21:38906853:C:T	rs11910555	C	T	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr21	38922099	38922100	chr21:38922100:A:G	rs2836757	A	G	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr21	38971068	38971069	chr21:38971069:T:A	rs9982800	T	A	T	Sox2_MA0143.3	9	0	-	0	0	.
chr21	38982320	38982321	chr21:38982321:C:T	rs146493190	C	T	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr21	38982553	38982554	chr21:38982554:G:A	rs11088461	G	A	G	Sox2_MA0143.3	7	1	-	9.019595766176417	9.613475778572903	CCATTGTC
chr21	38989264	38989265	chr21:38989265:G:A	rs17461543	G	A	G	Sox2_MA0143.3	25	0	-	0	0	.
chr21	38992728	38992729	chr21:38992729:C:G	rs2836814	C	G	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr21	39000781	39000782	chr21:39000782:G:A	rs116957546	G	A	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr21	39008896	39008897	chr21:39008897:C:T	rs2836824	C	T	T	Sox2_MA0143.3	-2	0	-	0	0	.
chr21	39034354	39034355	chr21:39034355:T:C	rs185906295	T	C	T	Sox2_MA0143.3	-1	0	-	0	0	.
chr21	39077902	39077903	chr21:39077903:G:A	rs74641112	G	A	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr21	39083005	39083006	chr21:39083006:C:T	rs114461527	C	T	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr21	39087605	39087606	chr21:39087606:G:C	rs35819975	G	C	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr21	39138326	39138327	chr21:39138327:A:G	chr21:39138327:A:G	A	G	A	Sox2_MA0143.3	15	0	+	0	0	.
chr21	39220302	39220303	chr21:39220303:A:G	rs8128118	A	G	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr21	39294344	39294345	chr21:39294345:T:C	rs2836978	T	C	T	Sox2_MA0143.3	15	0	-	0	0	.
chr21	39456010	39456011	chr21:39456011:C:T	rs75689259	C	T	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr21	39556005	39556006	chr21:39556006:C:A	rs2837075	C	A	C	Sox2_MA0143.3	5	1	-	8.676919043985553	1.7681642646703324	CCATTGTG
chr21	39572283	39572284	chr21:39572284:G:C	rs599377	G	C	C	Sox2_MA0143.3	20	0	+	0	0	.
chr21	39644122	39644123	chr21:39644123:G:A	rs490561	G	A	A	Sox2_MA0143.3	-11	0	+	0	0	.
chr21	39665871	39665872	chr21:39665872:A:G	rs4818066	A	G	a	Sox2_MA0143.3	-13	0	+	0	0	.
chr21	39681581	39681582	chr21:39681582:C:T	rs2837115	C	T	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr21	39738645	39738646	chr21:39738646:G:C	rs528412440	G	C	G	Sox2_MA0143.3	15	0	-	0	0	.
chr21	39738658	39738659	chr21:39738659:A:C	rs185852121	A	C	A	Sox2_MA0143.3	2	1	-	9.206767037375712	2.900948058900136	CCTTTGTC
chr21	39746417	39746418	chr21:39746418:G:A	rs61040557	G	A	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr21	39923747	39923748	chr21:39923748:A:G	rs1888504	A	G	A	Sox2_MA0143.3	17	0	-	0	0	.
chr21	39925947	39925948	chr21:39925948:G:A	rs2037920	G	A	G	Sox2_MA0143.3	22	0	+	0	0	.
chr21	39952388	39952389	chr21:39952389:T:G	rs73217368	T	G	T	Sox2_MA0143.3	-16	0	-	0	0	.
chr21	40012009	40012010	chr21:40012010:T:C	rs73221333	T	C	T	Sox2_MA0143.3	6	1	+	8.676919043985553	1.7681642646703326	CCATTGTG
chr21	40028686	40028687	chr21:40028687:A:G	rs35449546	A	G	A	Sox2_MA0143.3	23	0	+	0	0	.
chr21	40048277	40048278	chr21:40048278:T:G	rs117732927	T	G	T	Sox2_MA0143.3	-13	0	+	0	0	.
chr21	40102816	40102817	chr21:40102817:A:G	rs9647186	A	G	A	Sox2_MA0143.3	-18	0	+	0	0	.
chr21	40155322	40155323	chr21:40155323:C:T	rs2837463	C	T	T	Sox2_MA0143.3	-15	0	-	0	0	.
chr21	40165449	40165450	chr21:40165450:T:C	rs2205143	T	C	T	Sox2_MA0143.3	-14	0	-	0	0	.
chr21	40178644	40178645	chr21:40178645:G:C	rs74770328	G	C	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr21	40312162	40312163	chr21:40312163:C:T	rs34336407	C	T	G	Sox2_MA0143.3	14	0	+	0	0	.
chr21	40413530	40413531	chr21:40413531:T:G	rs150679894	T	G	T	Sox2_MA0143.3	3	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr21	40495338	40495339	chr21:40495339:T:G	rs2410252	T	G	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr21	41028991	41028992	chr21:41028992:T:C	rs9305717	T	C	C	Sox2_MA0143.3	9	0	+	0	0	.
chr21	41063654	41063655	chr21:41063655:A:G	rs2837919	A	G	A	Sox2_MA0143.3	10	0	-	0	0	.
chr21	41148206	41148207	chr21:41148207:T:C	rs9980363	T	C	T	Sox2_MA0143.3	17	0	-	0	0	.
chr21	41234914	41234915	chr21:41234915:C:T	rs28582493	C	T	C	Sox2_MA0143.3	18	0	+	0	0	.
chr21	41329397	41329398	chr21:41329398:G:A	rs2410418	G	A	G	Sox2_MA0143.3	27	0	+	0	0	.
chr21	41396630	41396631	chr21:41396631:A:T	rs534502922	A	T	A	Sox2_MA0143.3	12	0	-	0	0	.
chr21	41396633	41396634	chr21:41396634:T:C	rs57151183	T	C	T	Sox2_MA0143.3	9	0	-	0	0	.
chr21	41421126	41421127	chr21:41421127:G:A	rs143720309	G	A	G	Sox2_MA0143.3	10	0	-	0	0	.
chr21	41437794	41437795	chr21:41437795:T:C	rs467692	T	C	T	Sox2_MA0143.3	-4	0	+	0	0	.
chr21	41466108	41466109	chr21:41466109:G:A	rs374981614	G	A	G	Sox2_MA0143.3	13	0	+	0	0	.
chr21	41466210	41466211	chr21:41466211:A:T	rs73905370	A	T	A	Sox2_MA0143.3	-6	0	-	0	0	.
chr21	41466270	41466271	chr21:41466271:G:A	rs55896064	G	A	G	Sox2_MA0143.3	8	0	-	0	0	.
chr21	41605715	41605716	chr21:41605716:T:C	rs6586241	T	C	C	Sox2_MA0143.3	25	0	-	0	0	.
chr21	41609166	41609167	chr21:41609167:T:C	rs12626987	T	C	C	Sox2_MA0143.3	23	0	-	0	0	.
chr21	41612584	41612585	chr21:41612585:G:A	rs76873316	G	A	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr21	41702538	41702539	chr21:41702539:T:A	rs35818176	T	A	A	Sox2_MA0143.3	-4	0	-	0	0	.
chr21	41710545	41710546	chr21:41710546:T:C	rs13048836	T	C	C	Sox2_MA0143.3	-20	0	-	0	0	.
chr21	41712584	41712585	chr21:41712585:G:C	rs62214242	G	C	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr21	41715384	41715385	chr21:41715385:G:C	rs4919931	G	C	C	Sox2_MA0143.3	5	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr21	41734922	41734923	chr21:41734923:G:C	rs2838110	G	C	G	Sox2_MA0143.3	21	0	+	0	0	.
chr21	41756159	41756160	chr21:41756160:A:G	rs56165021	A	G	G	Sox2_MA0143.3	17	0	+	0	0	.
chr21	41771500	41771501	chr21:41771501:T:C	rs4377411	T	C	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr21	41798703	41798704	chr21:41798704:G:T	rs1054756	G	T	G	Sox2_MA0143.3	0	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr21	41799690	41799691	chr21:41799691:T:C	rs13046204	T	C	T	Sox2_MA0143.3	9	0	+	0	0	.
chr21	41834600	41834601	chr21:41834601:C:T	rs4920074	C	T	c	Sox2_MA0143.3	-14	0	-	0	0	.
chr21	41846733	41846734	chr21:41846734:T:C	rs4920056	T	C	T	Sox2_MA0143.3	2	1	-	9.613475778572903	3.494828071296623	CCATTGTT
chr21	41898933	41898934	chr21:41898934:C:T	rs9984905	C	T	T	Sox2_MA0143.3	27	0	-	0	0	.
chr21	41899725	41899726	chr21:41899726:A:G	rs2839419	A	G	G	Sox2_MA0143.3	-3	0	-	0	0	.
chr21	41926584	41926585	chr21:41926585:G:A	rs193253532	G	A	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr21	41926595	41926596	chr21:41926596:A:C	rs140466968	A	C	A	Sox2_MA0143.3	-7	0	+	0	0	.
chr21	41964454	41964455	chr21:41964455:C:A	rs34366247	C	A	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr21	42038199	42038200	chr21:42038200:C:T	rs138641538	C	T	C	Sox2_MA0143.3	22	0	+	0	0	.
chr21	42092716	42092717	chr21:42092717:A:G	rs220306	A	G	G	Sox2_MA0143.3	-3	0	+	0	0	.
chr21	42095063	42095064	chr21:42095064:C:G	chr21:42095064:C:G	C	G	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr21	42157122	42157123	chr21:42157123:A:G	rs576828347	A	G	A	Sox2_MA0143.3	-14	0	-	0	0	.
chr21	42168420	42168421	chr21:42168421:C:A	rs468703	C	A	A	Sox2_MA0143.3	1	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr21	42207700	42207701	chr21:42207701:C:T	rs7278922	C	T	C	Sox2_MA0143.3	10	0	+	0	0	.
chr21	42239719	42239720	chr21:42239720:T:C	rs225448	T	C	T	Sox2_MA0143.3	8	0	+	0	0	.
chr21	42263630	42263631	chr21:42263631:C:T	rs117046649	C	T	C	Sox2_MA0143.3	10	0	+	0	0	.
chr21	42277765	42277766	chr21:42277766:G:A	rs113143598	G	A	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr21	42298422	42298423	chr21:42298423:G:A	rs139775553	G	A	G	Sox2_MA0143.3	8	0	+	0	0	.
chr21	42312717	42312718	chr21:42312718:C:A	rs2236705	C	A	C	Sox2_MA0143.3	20	0	-	0	0	.
chr21	42315530	42315531	chr21:42315531:G:C	rs77436142	G	C	G	Sox2_MA0143.3	5	1	+	9.206767037375712	2.298012258060492	CCTTTGTC
chr21	42321486	42321487	chr21:42321487:T:C	rs225414	T	C	T	Sox2_MA0143.3	4	1	+	9.206767037375712	2.2980122580604916	CCTTTGTC
chr21	42324251	42324252	chr21:42324252:T:C	rs225416	T	C	C	Sox2_MA0143.3	19	0	-	0	0	.
chr21	42374665	42374666	chr21:42374666:G:A	rs28653693	G	A	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr21	42471453	42471454	chr21:42471454:G:A	rs530989665	G	A	G	Sox2_MA0143.3	25	0	-	0	0	.
chr21	42482393	42482394	chr21:42482394:C:A	rs192637389	C	A	C	Sox2_MA0143.3	26	0	+	0	0	.
chr21	42520865	42520866	chr21:42520866:A:G	rs13046480	A	G	G	Sox2_MA0143.3	14	0	-	0	0	.
chr21	42567439	42567440	chr21:42567440:T:A	rs2839554	T	A	T	Sox2_MA0143.3	-3	0	+	0	0	.
chr21	42567792	42567793	chr21:42567793:G:A	rs28525581	G	A	A	Sox2_MA0143.3	5	1	+	9.019595766176417	2.110840986861197	CCATTGTC
chr21	42582638	42582639	chr21:42582639:A:G	rs368955	A	G	A	Sox2_MA0143.3	10	0	-	0	0	.
chr21	42605477	42605478	chr21:42605478:A:G	rs143811938	A	G	a	Sox2_MA0143.3	15	0	-	0	0	.
chr21	42619486	42619487	chr21:42619487:C:T	rs366994	C	T	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr21	42634586	42634587	chr21:42634587:C:T	rs57700638	C	T	T	Sox2_MA0143.3	-13	0	+	0	0	.
chr21	42635935	42635936	chr21:42635936:T:C	rs422649	T	C	C	Sox2_MA0143.3	19	0	+	0	0	.
chr21	42635937	42635938	chr21:42635938:C:A	rs440604	C	A	A	Sox2_MA0143.3	21	0	+	0	0	.
chr21	42654601	42654602	chr21:42654602:A:G	rs9981388	A	G	A	Sox2_MA0143.3	13	0	+	0	0	.
chr21	42657126	42657127	chr21:42657127:G:A	rs2269127	G	A	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr21	42661595	42661596	chr21:42661596:A:G	rs62215376	A	G	a	Sox2_MA0143.3	2	1	+	8.676919043985553	2.5582713367092715	CCATTGTG
chr21	42680944	42680945	chr21:42680945:A:G	rs149736955	A	G	A	Sox2_MA0143.3	-5	0	+	0	0	.
chr21	42680968	42680969	chr21:42680969:T:C	rs2251273	T	C	C	Sox2_MA0143.3	19	0	+	0	0	.
chr21	42724533	42724534	chr21:42724534:T:C	rs2269152	T	C	C	Sox2_MA0143.3	16	0	+	0	0	.
chr21	42724541	42724542	chr21:42724542:C:T	rs575769210	C	T	C	Sox2_MA0143.3	24	0	+	0	0	.
chr21	42725796	42725797	chr21:42725797:A:G	rs8130944	A	G	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr21	42725805	42725806	chr21:42725806:T:C	rs2284966	T	C	T	Sox2_MA0143.3	-8	0	+	0	0	.
chr21	42738153	42738154	chr21:42738154:T:C	rs62213385	T	C	C	Sox2_MA0143.3	10	0	+	0	0	.
chr21	42738154	42738155	chr21:42738155:G:A	rs182891200	G	A	G	Sox2_MA0143.3	11	0	+	0	0	.
chr21	42777724	42777725	chr21:42777725:G:C	rs528373527	G	C	G	Sox2_MA0143.3	-3	0	-	0	0	.
chr21	42802708	42802709	chr21:42802709:A:G	rs138469847	A	G	A	Sox2_MA0143.3	27	0	-	0	0	.
chr21	42845474	42845475	chr21:42845475:G:A	rs111345321	G	A	G	Sox2_MA0143.3	8	0	+	0	0	.
chr21	42845491	42845492	chr21:42845492:C:T	rs6586249	C	T	C	Sox2_MA0143.3	25	0	+	0	0	.
chr21	42892296	42892297	chr21:42892297:T:C	rs34467158	T	C	T	Sox2_MA0143.3	27	0	-	0	0	.
chr21	42892343	42892344	chr21:42892344:C:T	rs1045080768	C	T	C	Sox2_MA0143.3	-20	0	-	0	0	.
chr21	42925416	42925417	chr21:42925417:G:A	rs61734233	G	A	G	Sox2_MA0143.3	9	0	+	0	0	.
chr21	43046067	43046068	chr21:43046068:G:T	rs114211529	G	T	G	Sox2_MA0143.3	18	0	+	0	0	.
chr21	43194716	43194717	chr21:43194717:G:A	rs186121859	G	A	.	Sox2_MA0143.3	15	0	+	0	0	.
chr21	43206628	43206629	chr21:43206629:C:T	rs75732647	C	T	.	Sox2_MA0143.3	-19	0	-	0	0	.
chr21	43271045	43271046	chr21:43271046:A:G	rs8129786	A	G	.	Sox2_MA0143.3	-5	0	-	0	0	.
chr21	43365008	43365009	chr21:43365009:G:A	rs539072	G	A	.	Sox2_MA0143.3	-11	0	+	0	0	.
chr21	43663543	43663544	chr21:43663544:A:G	rs9983670	A	G	a	Sox2_MA0143.3	-11	0	+	0	0	.
chr21	43669995	43669996	chr21:43669996:G:A	rs2838344	G	A	G	Sox2_MA0143.3	16	0	+	0	0	.
chr21	43698819	43698820	chr21:43698820:G:C	rs11700909	G	C	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr21	43761610	43761611	chr21:43761611:T:C	rs3211247	T	C	T	Sox2_MA0143.3	12	0	+	0	0	.
chr21	43768396	43768397	chr21:43768397:G:A	rs74451301	G	A	G	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr21	43768402	43768403	chr21:43768403:G:A	rs375509663	G	A	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr21	43783434	43783435	chr21:43783435:C:T	rs114337383	C	T	c	Sox2_MA0143.3	12	0	-	0	0	.
chr21	43783439	43783440	chr21:43783440:G:A	rs76533027	G	A	g	Sox2_MA0143.3	7	1	-	9.206767037375712	9.800647049772198	CCTTTGTC
chr21	43786627	43786628	chr21:43786628:C:T	rs62229234	C	T	-	Sox2_MA0143.3	-19	0	+	0	0	.
chr21	43812512	43812513	chr21:43812513:C:T	rs1048179336	C	T	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr21	43815470	43815471	chr21:43815471:G:A	rs68106965	G	A	G	Sox2_MA0143.3	9	0	-	0	0	.
chr21	43873679	43873680	chr21:43873680:A:G	rs9637232	A	G	A	Sox2_MA0143.3	24	0	-	0	0	.
chr21	43906034	43906035	chr21:43906035:G:T	rs2838429	G	T	g	Sox2_MA0143.3	-20	0	+	0	0	.
chr21	43966677	43966678	chr21:43966678:T:C	rs6518340	T	C	C	Sox2_MA0143.3	2	1	+	9.800647049772198	3.494828071296623	CCTTTGTT
chr21	43971870	43971871	chr21:43971871:T:C	rs9976628	T	C	C	Sox2_MA0143.3	4	1	+	8.864090315184848	1.9553355358696274	CCTTTGTG
chr21	44054240	44054241	chr21:44054241:G:A	rs1042119374	G	A	G	Sox2_MA0143.3	22	0	+	0	0	.
chr21	44055607	44055608	chr21:44055608:G:C	rs9306172	G	C	C	Sox2_MA0143.3	23	0	-	0	0	.
chr21	44067299	44067300	chr21:44067300:G:C	rs2838481	G	C	G	Sox2_MA0143.3	27	0	-	0	0	.
chr21	44067334	44067335	chr21:44067335:G:A	rs77729562	G	A	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr21	44253813	44253814	chr21:44253814:C:T	chr21:44253814:C:T	C	T	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr21	44288092	44288093	chr21:44288093:T:C	rs2073609	T	C	T	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr21	44303500	44303501	chr21:44303501:C:T	rs2838544	C	T	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr21	44303520	44303521	chr21:44303521:C:G	rs9979367	C	G	G	Sox2_MA0143.3	1	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr21	44303534	44303535	chr21:44303535:C:T	rs9979369	C	T	c	Sox2_MA0143.3	15	0	+	0	0	.
chr21	44365594	44365595	chr21:44365595:T:C	rs2838555	T	C	G	Sox2_MA0143.3	11	0	+	0	0	.
chr21	44400312	44400313	chr21:44400313:C:T	rs35288229	C	T	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr21	44530666	44530667	chr21:44530667:G:A	rs8133141	G	A	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr21	44531234	44531235	chr21:44531235:T:C	rs2838583	T	C	C	Sox2_MA0143.3	23	0	-	0	0	.
chr21	44552708	44552709	chr21:44552709:C:T	rs146660912	C	T	C	Sox2_MA0143.3	26	0	+	0	0	.
chr21	44559452	44559453	chr21:44559453:G:A	rs117347650	G	A	G	Sox2_MA0143.3	17	0	+	0	0	.
chr21	44598436	44598437	chr21:44598437:A:G	rs77318280	A	G	A	Sox2_MA0143.3	-19	0	+	0	0	.
chr21	44603731	44603732	chr21:44603732:C:T	rs415753	C	T	c	Sox2_MA0143.3	-16	0	+	0	0	.
chr21	44603750	44603751	chr21:44603751:T:G	rs392686	T	G	T	Sox2_MA0143.3	3	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr21	44619403	44619404	chr21:44619404:T:A	rs233268	T	A	A	Sox2_MA0143.3	2	1	+	3.5547341015215945	3.3675628303222993	CCTTTGTA
chr21	44619421	44619422	chr21:44619422:C:G	rs58081688	C	G	C	Sox2_MA0143.3	20	0	+	0	0	.
chr21	44626512	44626513	chr21:44626513:C:T	rs762435	C	T	C	Sox2_MA0143.3	1	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr21	44629215	44629216	chr21:44629216:G:A	rs1076849	G	A	A	Sox2_MA0143.3	12	0	-	0	0	.
chr21	44639826	44639827	chr21:44639827:A:G	rs1827518	A	G	G	Sox2_MA0143.3	24	0	+	0	0	.
chr21	44659611	44659612	chr21:44659612:C:T	rs112720679	C	T	C	Sox2_MA0143.3	23	0	+	0	0	.
chr21	44704877	44704878	chr21:44704878:G:A	rs2838654	G	A	g	Sox2_MA0143.3	23	0	-	0	0	.
chr21	44765485	44765486	chr21:44765486:A:G	rs74360465	A	G	A	Sox2_MA0143.3	6	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr21	44806870	44806871	chr21:44806871:A:G	rs1051331	A	G	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr21	44841295	44841296	chr21:44841296:A:G	rs235259	A	G	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr21	44929580	44929581	chr21:44929581:C:T	rs1721	C	T	T	Sox2_MA0143.3	-16	0	+	0	0	.
chr21	44929599	44929600	chr21:44929600:T:C	rs62214473	T	C	T	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr21	44933329	44933330	chr21:44933330:C:T	rs73226622	C	T	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr21	44958994	44958995	chr21:44958995:G:A	rs79659350	G	A	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr21	44959025	44959026	chr21:44959026:G:A	rs76410874	G	A	G	Sox2_MA0143.3	11	0	+	0	0	.
chr21	44988445	44988446	chr21:44988446:T:C	rs914208	T	C	T	Sox2_MA0143.3	6	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr21	45079232	45079233	chr21:45079233:A:T	rs980373909	A	T	A	Sox2_MA0143.3	-9	0	-	0	0	.
chr21	45079242	45079243	chr21:45079243:A:G	rs12483312	A	G	A	Sox2_MA0143.3	-19	0	-	0	0	.
chr21	45150896	45150897	chr21:45150897:A:G	rs192848610	A	G	A	Sox2_MA0143.3	16	0	-	0	0	.
chr21	45159193	45159194	chr21:45159194:G:A	rs12185823	G	A	G	Sox2_MA0143.3	22	0	-	0	0	.
chr21	45162375	45162376	chr21:45162376:C:T	rs978166602	C	T	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr21	45228119	45228120	chr21:45228120:G:T	rs77438163	G	T	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr21	45228125	45228126	chr21:45228126:C:T	rs34806772	C	T	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr21	45257756	45257757	chr21:45257757:C:T	rs113381496	C	T	C	Sox2_MA0143.3	25	0	+	0	0	.
chr21	45261859	45261860	chr21:45261860:C:T	rs3673	C	T	T	Sox2_MA0143.3	-17	0	+	0	0	.
chr21	45305197	45305198	chr21:45305198:C:T	rs73910626	C	T	T	Sox2_MA0143.3	-6	0	-	0	0	.
chr21	45326355	45326356	chr21:45326356:A:C	rs535904539	A	C	A	Sox2_MA0143.3	6	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr21	45333407	45333408	chr21:45333408:G:T	rs9967982	G	T	G	Sox2_MA0143.3	17	0	-	0	0	.
chr21	45367418	45367419	chr21:45367419:A:G	rs8130794	A	G	G	Sox2_MA0143.3	12	0	-	0	0	.
chr21	45420425	45420426	chr21:45420426:G:T	rs73378964	G	T	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr21	45430611	45430612	chr21:45430612:G:A	rs79144954	G	A	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr21	45432644	45432645	chr21:45432645:G:A	rs11908976	G	A	G	Sox2_MA0143.3	12	0	-	0	0	.
chr21	45433344	45433345	chr21:45433345:T:C	rs7283026	T	C	C	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr21	45436394	45436395	chr21:45436395:G:A	rs112836219	G	A	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr21	45478995	45478996	chr21:45478996:T:C	rs116349681	T	C	T	Sox2_MA0143.3	26	0	-	0	0	.
chr21	45560712	45560713	chr21:45560713:C:T	rs2838961	C	T	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr21	45739671	45739672	chr21:45739672:A:G	rs13051489	A	G	-	Sox2_MA0143.3	-2	0	+	0	0	.
chr21	45819944	45819945	chr21:45819945:A:G	rs8129118	A	G	G	Sox2_MA0143.3	17	0	+	0	0	.
chr21	45848113	45848114	chr21:45848114:G:A	rs114219057	G	A	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr21	45860086	45860087	chr21:45860087:A:G	rs2839020	A	G	G	Sox2_MA0143.3	18	0	+	0	0	.
chr21	45876466	45876467	chr21:45876467:T:C	rs2839033	T	C	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr21	45885262	45885263	chr21:45885263:A:G	rs2330327	A	G	C	Sox2_MA0143.3	2	1	+	9.019595766176417	2.900948058900136	CCATTGTC
chr21	45885481	45885482	chr21:45885482:C:T	rs11702552	C	T	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr21	45889374	45889375	chr21:45889375:T:C	rs76078627	T	C	T	Sox2_MA0143.3	-16	0	+	0	0	.
chr21	45896769	45896770	chr21:45896770:C:T	rs36178797	C	T	-	Sox2_MA0143.3	-19	0	+	0	0	.
chr21	45913631	45913632	chr21:45913632:T:C	rs426594	T	C	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr21	45953163	45953164	chr21:45953164:G:A	rs7281153	G	A	A	Sox2_MA0143.3	-10	0	-	0	0	.
chr21	45963775	45963776	chr21:45963776:T:C	rs11700929	T	C	T	Sox2_MA0143.3	13	0	-	0	0	.
chr21	46046791	46046792	chr21:46046792:G:C	rs11089042	G	C	G	Sox2_MA0143.3	0	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr21	46058894	46058895	chr21:46058895:G:A	rs59359349	G	A	G	Sox2_MA0143.3	24	0	-	0	0	.
chr21	46061567	46061568	chr21:46061568:C:G	rs8131641	C	G	C	Sox2_MA0143.3	15	0	+	0	0	.
chr21	46092143	46092144	chr21:46092144:C:T	rs185122716	C	T	.	Sox2_MA0143.3	0	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr21	46092154	46092155	chr21:46092155:C:T	rs572606432	C	T	.	Sox2_MA0143.3	11	0	+	0	0	.
chr21	46093029	46093030	chr21:46093030:C:T	rs113729774	C	T	.	Sox2_MA0143.3	26	0	+	0	0	.
chr21	46151294	46151295	chr21:46151295:T:C	rs17004505	T	C	t	Sox2_MA0143.3	11	0	-	0	0	.
chr21	46289959	46289960	chr21:46289960:C:G	rs9798621	C	G	c	Sox2_MA0143.3	0	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr21	46289982	46289983	chr21:46289983:G:A	rs9798614	G	A	g	Sox2_MA0143.3	23	0	+	0	0	.
chr21	46289997	46289998	chr21:46289998:G:A	rs201331685	G	A	g	Sox2_MA0143.3	-10	0	+	0	0	.
chr21	46416936	46416937	chr21:46416937:A:G	rs13340001	A	G	G	Sox2_MA0143.3	26	0	+	0	0	.
chr21	46420614	46420615	chr21:46420615:A:G	rs56096475	A	G	A	Sox2_MA0143.3	3	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr21	46447404	46447405	chr21:46447405:G:A	rs2839265	G	A	G	Sox2_MA0143.3	8	0	+	0	0	.
chr21	46504055	46504056	chr21:46504056:C:G	rs2839298	C	G	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr21	46515513	46515514	chr21:46515514:G:A	rs150870200	G	A	G	Sox2_MA0143.3	-14	0	+	0	0	.
chr21	46561964	46561965	chr21:46561965:T:C	rs2839326	T	C	t	Sox2_MA0143.3	6	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr21	46571002	46571003	chr21:46571003:T:A	rs117450955	T	A	T	Sox2_MA0143.3	-16	0	-	0	0	.
chr21	46610552	46610553	chr21:46610553:A:G	rs9982863	A	G	A	Sox2_MA0143.3	-8	0	+	0	0	.
chr21	46621579	46621580	chr21:46621580:G:T	rs76053783	G	T	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr22	10961474	10961475	chr22:10961475:C:T	rs1233170934	C	T	.	Sox2_MA0143.3	-17	0	+	0	0	.
chr22	10961489	10961490	chr22:10961490:T:C	rs1465490222	T	C	.	Sox2_MA0143.3	-2	0	+	0	0	.
chr22	11034987	11034988	chr22:11034988:G:A	rs879016636	G	A	.	Sox2_MA0143.3	-2	0	+	0	0	.
chr22	11253416	11253417	chr22:11253417:T:C	rs1167434102	T	C	.	Sox2_MA0143.3	9	0	-	0	0	.
chr22	11253443	11253444	chr22:11253444:G:A	rs1338911963	G	A	.	Sox2_MA0143.3	-18	0	-	0	0	.
chr22	11574247	11574248	chr22:11574248:G:A	rs1474004342	G	A	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr22	15665738	15665739	chr22:15665739:G:A	rs199781812	G	A	.	Sox2_MA0143.3	14	0	+	0	0	.
chr22	15665751	15665752	chr22:15665752:G:C	rs72485236	G	C	.	Sox2_MA0143.3	27	0	+	0	0	.
chr22	15814766	15814767	chr22:15814767:T:A	rs10854490	T	A	T	Sox2_MA0143.3	-13	0	-	0	0	.
chr22	16132676	16132677	chr22:16132677:C:G	rs1313934302	C	G	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr22	16398153	16398154	chr22:16398154:T:C	rs9606197	T	C	.	Sox2_MA0143.3	15	0	-	0	0	.
chr22	16609648	16609649	chr22:16609649:C:A	rs1047424418	C	A	.	Sox2_MA0143.3	-18	0	+	0	0	.
chr22	16659132	16659133	chr22:16659133:G:C	rs11703273	G	C	.	Sox2_MA0143.3	-6	0	+	0	0	.
chr22	16695487	16695488	chr22:16695488:C:G	rs2529881	C	G	.	Sox2_MA0143.3	-3	0	+	0	0	.
chr22	16774774	16774775	chr22:16774775:C:A	rs73380113	C	A	.	Sox2_MA0143.3	24	0	+	0	0	.
chr22	16824886	16824887	chr22:16824887:G:A	rs9606478	G	A	.	Sox2_MA0143.3	17	0	-	0	0	.
chr22	16857034	16857035	chr22:16857035:C:T	rs190815208	C	T	.	Sox2_MA0143.3	-3	0	-	0	0	.
chr22	16973187	16973188	chr22:16973188:T:C	rs28663120	T	C	t	Sox2_MA0143.3	-19	0	+	0	0	.
chr22	17008655	17008656	chr22:17008656:C:T	rs5746961	C	T	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr22	17058734	17058735	chr22:17058735:C:G	rs1054946	C	G	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr22	17086286	17086287	chr22:17086287:G:A	rs5748859	G	A	G	Sox2_MA0143.3	14	0	-	0	0	.
chr22	17087322	17087323	chr22:17087323:C:T	rs9606606	C	T	C	Sox2_MA0143.3	17	0	-	0	0	.
chr22	17143324	17143325	chr22:17143325:G:A	rs2302522	G	A	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr22	17153159	17153160	chr22:17153160:A:G	rs5994180	A	G	A	Sox2_MA0143.3	3	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr22	17188578	17188579	chr22:17188579:T:C	rs9617966	T	C	T	Sox2_MA0143.3	18	0	+	0	0	.
chr22	17194433	17194434	chr22:17194434:C:T	rs5748937	C	T	C	Sox2_MA0143.3	20	0	+	0	0	.
chr22	17220977	17220978	chr22:17220978:C:T	rs57991508	C	T	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr22	17220979	17220980	chr22:17220980:C:T	rs1807520	C	T	T	Sox2_MA0143.3	-20	0	-	0	0	.
chr22	17243276	17243277	chr22:17243277:G:A	rs16982239	G	A	g	Sox2_MA0143.3	25	0	+	0	0	.
chr22	17257384	17257385	chr22:17257385:C:T	rs569915961	C	T	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr22	17359900	17359901	chr22:17359901:T:C	rs4413243	T	C	T	Sox2_MA0143.3	12	0	+	0	0	.
chr22	17437369	17437370	chr22:17437370:G:A	rs5746379	G	A	G	Sox2_MA0143.3	24	0	+	0	0	.
chr22	17439491	17439492	chr22:17439492:A:G	rs4819589	A	G	G	Sox2_MA0143.3	6	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr22	17446829	17446830	chr22:17446830:G:A	rs60403458	G	A	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr22	17467402	17467403	chr22:17467403:T:C	rs66735877	T	C	C	Sox2_MA0143.3	11	0	-	0	0	.
chr22	17494446	17494447	chr22:17494447:T:C	rs17741183	T	C	T	Sox2_MA0143.3	23	0	-	0	0	.
chr22	17511819	17511820	chr22:17511820:G:A	rs5747211	G	A	G	Sox2_MA0143.3	17	0	-	0	0	.
chr22	17518536	17518537	chr22:17518537:T:G	rs78914	T	G	G	Sox2_MA0143.3	12	0	+	0	0	.
chr22	17562915	17562916	chr22:17562916:A:G	rs76266686	A	G	A	Sox2_MA0143.3	22	0	+	0	0	.
chr22	17592496	17592497	chr22:17592497:T:C	rs3532	T	C	T	Sox2_MA0143.3	-6	0	+	0	0	.
chr22	17613898	17613899	chr22:17613899:A:G	rs5746443	A	G	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr22	17672644	17672645	chr22:17672645:G:A	rs73378703	G	A	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr22	17832301	17832302	chr22:17832302:G:A	rs5992874	G	A	G	Sox2_MA0143.3	16	0	-	0	0	.
chr22	17842774	17842775	chr22:17842775:T:C	rs61626259	T	C	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr22	17881812	17881813	chr22:17881813:C:G	rs2165971	C	G	G	Sox2_MA0143.3	5	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr22	17897866	17897867	chr22:17897867:C:T	chr22:17897867:C:T	C	T	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr22	17924973	17924974	chr22:17924974:C:T	rs75328607	C	T	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr22	17943532	17943533	chr22:17943533:T:C	rs400509	T	C	T	Sox2_MA0143.3	24	0	-	0	0	.
chr22	17964064	17964065	chr22:17964065:A:G	rs445583	A	G	A	Sox2_MA0143.3	14	0	-	0	0	.
chr22	18056889	18056890	chr22:18056890:A:G	rs455550	A	G	A	Sox2_MA0143.3	14	0	+	0	0	.
chr22	18077205	18077206	chr22:18077206:A:C	rs465941	A	C	A	Sox2_MA0143.3	15	0	+	0	0	.
chr22	18122090	18122091	chr22:18122091:C:T	rs114040112	C	T	.	Sox2_MA0143.3	13	0	-	0	0	.
chr22	18133640	18133641	chr22:18133641:A:G	rs80131763	A	G	.	Sox2_MA0143.3	6	1	-	8.676919043985553	1.7681642646703326	CCATTGTG
chr22	18859594	18859595	chr22:18859595:G:T	rs551253422	G	T	g	Sox2_MA0143.3	0	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr22	18955902	18955903	chr22:18955903:G:A	rs182948896	G	A	N	Sox2_MA0143.3	25	0	-	0	0	.
chr22	19004607	19004608	chr22:19004608:C:T	rs5993462	C	T	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr22	19011335	19011336	chr22:19011336:G:A	rs116131290	G	A	G	Sox2_MA0143.3	15	0	-	0	0	.
chr22	19018692	19018693	chr22:19018693:A:G	rs2003007	A	G	A	Sox2_MA0143.3	10	0	+	0	0	.
chr22	19018701	19018702	chr22:19018702:T:G	rs2904555	T	G	T	Sox2_MA0143.3	19	0	+	0	0	.
chr22	19039363	19039364	chr22:19039364:C:A	rs5992353	C	A	A	Sox2_MA0143.3	13	0	-	0	0	.
chr22	19052932	19052933	chr22:19052933:C:T	rs11912290	C	T	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr22	19059889	19059890	chr22:19059890:G:A	rs113450749	G	A	G	Sox2_MA0143.3	-14	0	+	0	0	.
chr22	19087239	19087240	chr22:19087240:T:C	rs2238755	T	C	T	Sox2_MA0143.3	12	0	-	0	0	.
chr22	19322170	19322171	chr22:19322171:T:C	rs11089270	T	C	T	Sox2_MA0143.3	17	0	-	0	0	.
chr22	19389405	19389406	chr22:19389406:A:T	rs5748172	A	T	T	Sox2_MA0143.3	-3	0	-	0	0	.
chr22	19411533	19411534	chr22:19411534:G:A	rs12165774	G	A	G	Sox2_MA0143.3	15	0	-	0	0	.
chr22	19479430	19479431	chr22:19479431:G:C	rs111370721	G	C	G	Sox2_MA0143.3	5	1	+	9.019595766176417	2.110840986861197	CCATTGTC
chr22	19479447	19479448	chr22:19479448:A:G	chr22:19479448:A:G	A	G	A	Sox2_MA0143.3	22	0	+	0	0	.
chr22	19518007	19518008	chr22:19518008:C:T	rs13447284	C	T	C	Sox2_MA0143.3	21	0	+	0	0	.
chr22	19544221	19544222	chr22:19544222:C:T	rs113119118	C	T	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr22	19632221	19632222	chr22:19632222:C:T	rs5992452	C	T	T	Sox2_MA0143.3	-11	0	+	0	0	.
chr22	19632294	19632295	chr22:19632295:A:G	chr22:19632295:A:G	A	G	A	Sox2_MA0143.3	-13	0	+	0	0	.
chr22	19632311	19632312	chr22:19632312:T:A	rs58754097	T	A	T	Sox2_MA0143.3	4	1	+	9.206767037375712	2.2980122580604916	CCTTTGTC
chr22	19632324	19632325	chr22:19632325:G:A	rs73162682	G	A	G	Sox2_MA0143.3	17	0	+	0	0	.
chr22	19669763	19669764	chr22:19669764:A:G	rs149388748	A	G	A	Sox2_MA0143.3	20	0	+	0	0	.
chr22	19680586	19680587	chr22:19680587:A:G	rs9605004	A	G	A	Sox2_MA0143.3	2	1	+	8.676919043985553	2.5582713367092715	CCATTGTG
chr22	19769848	19769849	chr22:19769849:G:A	rs2238775	G	A	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr22	19876069	19876070	chr22:19876070:T:C	rs16984299	T	C	T	Sox2_MA0143.3	-3	0	+	0	0	.
chr22	19876090	19876091	chr22:19876091:G:A	rs34207608	G	A	g	Sox2_MA0143.3	18	0	+	0	0	.
chr22	19965866	19965867	chr22:19965867:G:A	rs9332368	G	A	G	Sox2_MA0143.3	20	0	-	0	0	.
chr22	19967323	19967324	chr22:19967324:G:A	rs4646318	G	A	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr22	20011439	20011440	chr22:20011440:T:G	rs73877106	T	G	T	Sox2_MA0143.3	-4	0	+	0	0	.
chr22	20029921	20029922	chr22:20029922:T:C	rs2531708	T	C	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr22	20081648	20081649	chr22:20081649:A:G	rs9606235	A	G	G	Sox2_MA0143.3	26	0	+	0	0	.
chr22	20112367	20112368	chr22:20112368:C:G	rs1048659	C	G	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr22	20271366	20271367	chr22:20271367:C:T	rs9617868	C	T	C	Sox2_MA0143.3	20	0	+	0	0	.
chr22	20280426	20280427	chr22:20280427:C:T	rs146722609	C	T	.	Sox2_MA0143.3	-8	0	-	0	0	.
chr22	20317474	20317475	chr22:20317475:C:A	rs112276926	C	A	C	Sox2_MA0143.3	-20	0	-	0	0	.
chr22	20419189	20419190	chr22:20419190:G:C	rs58803203	G	C	C	Sox2_MA0143.3	11	0	-	0	0	.
chr22	20430620	20430621	chr22:20430621:T:G	rs879193	T	G	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr22	20430621	20430622	chr22:20430622:T:A	rs56935344	T	A	A	Sox2_MA0143.3	-5	0	+	0	0	.
chr22	20463816	20463817	chr22:20463817:G:A	rs98399	G	A	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr22	20535979	20535980	chr22:20535980:G:A	rs5757755	G	A	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr22	20544035	20544036	chr22:20544036:T:C	rs4821947	T	C	C	Sox2_MA0143.3	8	0	+	0	0	.
chr22	20552166	20552167	chr22:20552167:C:T	rs28681662	C	T	C	Sox2_MA0143.3	23	0	-	0	0	.
chr22	20552184	20552185	chr22:20552185:C:T	rs113966201	C	T	C	Sox2_MA0143.3	5	1	-	9.613475778572903	2.7047209992576837	CCATTGTT
chr22	20552189	20552190	chr22:20552190:G:T	rs149687761	G	T	G	Sox2_MA0143.3	0	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr22	20649485	20649486	chr22:20649486:G:A	rs187042957	G	A	g	Sox2_MA0143.3	-4	0	+	0	0	.
chr22	20745189	20745190	chr22:20745190:A:G	rs2072514	A	G	a	Sox2_MA0143.3	8	0	-	0	0	.
chr22	20772566	20772567	chr22:20772567:T:C	rs75132902	T	C	T	Sox2_MA0143.3	-6	0	-	0	0	.
chr22	20845606	20845607	chr22:20845607:G:A	rs5760985	G	A	G	Sox2_MA0143.3	11	0	-	0	0	.
chr22	20853317	20853318	chr22:20853318:C:A	rs165707	C	A	C	Sox2_MA0143.3	26	0	-	0	0	.
chr22	20885867	20885868	chr22:20885868:C:T	rs150028394	C	T	C	Sox2_MA0143.3	19	0	+	0	0	.
chr22	20906225	20906226	chr22:20906226:C:T	rs74859622	C	T	C	Sox2_MA0143.3	13	0	+	0	0	.
chr22	20920710	20920711	chr22:20920711:T:A	rs77555485	T	A	T	Sox2_MA0143.3	-16	0	+	0	0	.
chr22	20920740	20920741	chr22:20920741:C:T	rs4822687	C	T	C	Sox2_MA0143.3	14	0	+	0	0	.
chr22	20963372	20963373	chr22:20963373:A:G	rs5761551	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr22	20969068	20969069	chr22:20969069:T:C	rs756878	T	C	T	Sox2_MA0143.3	-15	0	+	0	0	.
chr22	20969080	20969081	chr22:20969081:C:T	rs730351	C	T	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr22	20997379	20997380	chr22:20997380:C:T	rs56224700	C	T	C	Sox2_MA0143.3	14	0	+	0	0	.
chr22	21447071	21447072	chr22:21447072:A:G	rs1011118423	A	G	a	Sox2_MA0143.3	25	0	+	0	0	.
chr22	21557926	21557927	chr22:21557927:C:A	rs12168746	C	A	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr22	21630154	21630155	chr22:21630155:G:T	chr22:21630155:G:T	G	T	G	Sox2_MA0143.3	22	0	+	0	0	.
chr22	21630158	21630159	chr22:21630159:G:C	rs927566541	G	C	G	Sox2_MA0143.3	26	0	+	0	0	.
chr22	21701254	21701255	chr22:21701255:G:C	rs1471148492	G	C	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr22	21735800	21735801	chr22:21735801:T:C	rs1432481800	T	C	-	Sox2_MA0143.3	17	0	+	0	0	.
chr22	21964381	21964382	chr22:21964382:A:G	rs1018458663	A	G	A	Sox2_MA0143.3	-16	0	+	0	0	.
chr22	22043372	22043373	chr22:22043373:G:A	rs9622750	G	A	g	Sox2_MA0143.3	22	0	-	0	0	.
chr22	22045497	22045498	chr22:22045498:T:A	rs4821655	T	A	t	Sox2_MA0143.3	25	0	-	0	0	.
chr22	22045517	22045518	chr22:22045518:C:T	rs4820285	C	T	t	Sox2_MA0143.3	5	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr22	22058459	22058460	chr22:22058460:C:T	rs117796778	C	T	c	Sox2_MA0143.3	23	0	+	0	0	.
chr22	22113494	22113495	chr22:22113495:C:T	rs5756895	C	T	.	Sox2_MA0143.3	-15	0	+	0	0	.
chr22	22131255	22131256	chr22:22131256:A:C	chr22:22131256:A:C	A	C	.	Sox2_MA0143.3	-17	0	-	0	0	.
chr22	22224597	22224598	chr22:22224598:C:G	rs8142651	C	G	.	Sox2_MA0143.3	-11	0	-	0	0	.
chr22	22348157	22348158	chr22:22348158:C:A	rs112049143	C	A	.	Sox2_MA0143.3	11	0	-	0	0	.
chr22	22366836	22366837	chr22:22366837:G:A	rs7288914	G	A	.	Sox2_MA0143.3	-12	0	+	0	0	.
chr22	22386738	22386739	chr22:22386739:C:T	rs391850	C	T	.	Sox2_MA0143.3	17	0	+	0	0	.
chr22	22453457	22453458	chr22:22453458:C:T	rs9607889	C	T	N	Sox2_MA0143.3	27	0	-	0	0	.
chr22	22554429	22554430	chr22:22554430:C:T	rs2266981	C	T	-	Sox2_MA0143.3	13	0	+	0	0	.
chr22	22557584	22557585	chr22:22557585:A:G	rs8136728	A	G	a	Sox2_MA0143.3	20	0	-	0	0	.
chr22	22658210	22658211	chr22:22658211:G:A	rs11912421	G	A	.	Sox2_MA0143.3	-6	0	-	0	0	.
chr22	22668472	22668473	chr22:22668473:G:A	rs406876	G	A	.	Sox2_MA0143.3	-2	0	+	0	0	.
chr22	22774379	22774380	chr22:22774380:G:C	rs1445957736	G	C	.	Sox2_MA0143.3	-13	0	+	0	0	.
chr22	22794645	22794646	chr22:22794646:A:G	rs5759475	A	G	.	Sox2_MA0143.3	3	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr22	22798753	22798754	chr22:22798754:G:A	rs6003310	G	A	.	Sox2_MA0143.3	-17	0	-	0	0	.
chr22	22810048	22810049	chr22:22810049:C:T	rs147698896	C	T	.	Sox2_MA0143.3	-17	0	+	0	0	.
chr22	22814200	22814201	chr22:22814201:G:A	rs73162988	G	A	.	Sox2_MA0143.3	-12	0	-	0	0	.
chr22	22848613	22848614	chr22:22848614:G:A	rs77666712	G	A	.	Sox2_MA0143.3	-18	0	+	0	0	.
chr22	22865963	22865964	chr22:22865964:T:C	rs543184353	T	C	.	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr22	22871256	22871257	chr22:22871257:C:T	rs144198587	C	T	.	Sox2_MA0143.3	-2	0	-	0	0	.
chr22	22945962	22945963	chr22:22945963:C:T	rs5996420	C	T	T	Sox2_MA0143.3	24	0	-	0	0	.
chr22	22954004	22954005	chr22:22954005:G:A	rs7284782	G	A	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr22	22968446	22968447	chr22:22968447:G:A	rs9608058	G	A	G	Sox2_MA0143.3	-16	0	-	0	0	.
chr22	23076651	23076652	chr22:23076652:A:G	rs5751575	A	G	A	Sox2_MA0143.3	-16	0	+	0	0	.
chr22	23111205	23111206	chr22:23111206:C:G	rs142238209	C	G	C	Sox2_MA0143.3	9	0	+	0	0	.
chr22	23142724	23142725	chr22:23142725:A:C	rs79862190	A	C	A	Sox2_MA0143.3	6	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr22	23162470	23162471	chr22:23162471:T:C	rs5751593	T	C	T	Sox2_MA0143.3	-10	0	+	0	0	.
chr22	23205042	23205043	chr22:23205043:T:G	rs6003552	T	G	T	Sox2_MA0143.3	-3	0	+	0	0	.
chr22	23247295	23247296	chr22:23247296:C:G	rs5996505	C	G	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr22	23287414	23287415	chr22:23287415:A:T	rs7292656	A	T	T	Sox2_MA0143.3	-5	0	+	0	0	.
chr22	23292183	23292184	chr22:23292184:T:C	rs529526663	T	C	T	Sox2_MA0143.3	23	0	-	0	0	.
chr22	23318792	23318793	chr22:23318793:G:A	rs13057338	G	A	-	Sox2_MA0143.3	7	1	-	9.206767037375712	9.800647049772198	CCTTTGTC
chr22	23398565	23398566	chr22:23398566:A:G	rs2077052	A	G	N	Sox2_MA0143.3	-11	0	+	0	0	.
chr22	23403154	23403155	chr22:23403155:G:A	rs1017566167	G	A	g	Sox2_MA0143.3	-15	0	+	0	0	.
chr22	23500333	23500334	chr22:23500334:G:T	rs9608153	G	T	-	Sox2_MA0143.3	21	0	-	0	0	.
chr22	23500352	23500353	chr22:23500353:T:C	rs131346	T	C	-	Sox2_MA0143.3	2	1	-	9.019595766176417	2.900948058900136	CCATTGTC
chr22	23533368	23533369	chr22:23533369:G:C	rs77691903	G	C	G	Sox2_MA0143.3	25	0	-	0	0	.
chr22	23534382	23534383	chr22:23534383:T:C	rs73878932	T	C	T	Sox2_MA0143.3	16	0	+	0	0	.
chr22	23538625	23538626	chr22:23538626:T:C	rs131397	T	C	C	Sox2_MA0143.3	3	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr22	23605164	23605165	chr22:23605165:A:G	rs2154592	A	G	.	Sox2_MA0143.3	-16	0	+	0	0	.
chr22	23654275	23654276	chr22:23654276:A:G	rs6519460	A	G	a	Sox2_MA0143.3	-18	0	+	0	0	.
chr22	23680443	23680444	chr22:23680444:C:T	rs738785	C	T	.	Sox2_MA0143.3	22	0	+	0	0	.
chr22	23685460	23685461	chr22:23685461:A:C	rs1539768	A	C	.	Sox2_MA0143.3	7	1	-	9.613475778572903	8.676919043985553	CCATTGTT
chr22	23685462	23685463	chr22:23685463:C:G	rs1539769	C	G	.	Sox2_MA0143.3	5	1	-	9.613475778572903	2.7047209992576837	CCATTGTT
chr22	23746136	23746137	chr22:23746137:G:A	rs5759986	G	A	G	Sox2_MA0143.3	23	0	-	0	0	.
chr22	23791180	23791181	chr22:23791181:C:G	rs2073388	C	G	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr22	23822033	23822034	chr22:23822034:G:T	rs9612468	G	T	G	Sox2_MA0143.3	5	1	+	9.206767037375712	2.298012258060492	CCTTTGTC
chr22	23846005	23846006	chr22:23846006:C:G	rs59315374	C	G	G	Sox2_MA0143.3	5	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr22	23879217	23879218	chr22:23879218:G:C	rs9612496	G	C	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr22	23892746	23892747	chr22:23892747:A:G	rs12485068	A	G	A	Sox2_MA0143.3	8	0	+	0	0	.
chr22	23892747	23892748	chr22:23892748:T:C	rs12483884	T	C	C	Sox2_MA0143.3	9	0	+	0	0	.
chr22	23896982	23896983	chr22:23896983:A:G	rs115050560	A	G	A	Sox2_MA0143.3	-20	0	-	0	0	.
chr22	23922207	23922208	chr22:23922208:C:T	rs6003959	C	T	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr22	23925350	23925351	chr22:23925351:C:T	rs5760122	C	T	T	Sox2_MA0143.3	-1	0	+	0	0	.
chr22	23939609	23939610	chr22:23939610:C:A	rs958887864	C	A	C	Sox2_MA0143.3	5	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr22	23996456	23996457	chr22:23996457:G:A	rs412377	G	A	A	Sox2_MA0143.3	0	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr22	24191849	24191850	chr22:24191850:T:C	rs732811	T	C	T	Sox2_MA0143.3	-11	0	+	0	0	.
chr22	24338954	24338955	chr22:24338955:A:T	rs149489184	A	T	A	Sox2_MA0143.3	-15	0	-	0	0	.
chr22	24367507	24367508	chr22:24367508:T:C	rs5760368	T	C	c	Sox2_MA0143.3	-3	0	+	0	0	.
chr22	24389763	24389764	chr22:24389764:G:C	rs1055073	G	C	C	Sox2_MA0143.3	14	0	+	0	0	.
chr22	24703450	24703451	chr22:24703451:C:T	rs75434210	C	T	c	Sox2_MA0143.3	-15	0	+	0	0	.
chr22	24776149	24776150	chr22:24776150:C:G	rs5760643	C	G	c	Sox2_MA0143.3	-16	0	-	0	0	.
chr22	24994697	24994698	chr22:24994698:C:T	rs150943877	C	T	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr22	25050910	25050911	chr22:25050911:A:T	rs9306404	A	T	T	Sox2_MA0143.3	21	0	-	0	0	.
chr22	25053772	25053773	chr22:25053773:T:C	rs9612842	T	C	T	Sox2_MA0143.3	-20	0	-	0	0	.
chr22	25063064	25063065	chr22:25063065:T:C	rs73157997	T	C	T	Sox2_MA0143.3	24	0	+	0	0	.
chr22	25085247	25085248	chr22:25085248:A:G	rs6004430	A	G	A	Sox2_MA0143.3	2	1	+	9.613475778572903	3.494828071296623	CCATTGTT
chr22	25098776	25098777	chr22:25098777:C:T	rs1883278	C	T	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr22	25115162	25115163	chr22:25115163:A:G	rs760738	A	G	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr22	25143871	25143872	chr22:25143872:G:A	rs5996836	G	A	A	Sox2_MA0143.3	17	0	+	0	0	.
chr22	25415352	25415353	chr22:25415353:T:C	rs713774	T	C	N	Sox2_MA0143.3	23	0	+	0	0	.
chr22	25437850	25437851	chr22:25437851:T:A	rs610620	T	A	-	Sox2_MA0143.3	2	1	-	8.676919043985553	8.864090315184848	CCATTGTG
chr22	25527242	25527243	chr22:25527243:A:G	rs2103528	A	G	A	Sox2_MA0143.3	22	0	-	0	0	.
chr22	25712424	25712425	chr22:25712425:G:A	rs148223190	G	A	t	Sox2_MA0143.3	0	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr22	25782147	25782148	chr22:25782148:T:G	rs902209866	T	G	-	Sox2_MA0143.3	-10	0	+	0	0	.
chr22	25801707	25801708	chr22:25801708:C:G	rs116883690	C	G	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr22	26171325	26171326	chr22:26171326:C:A	rs186168694	C	A	C	Sox2_MA0143.3	13	0	-	0	0	.
chr22	26228188	26228189	chr22:26228189:C:T	rs9624998	C	T	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr22	26245114	26245115	chr22:26245115:G:A	rs5752291	G	A	G	Sox2_MA0143.3	26	0	+	0	0	.
chr22	26463557	26463558	chr22:26463558:A:C	rs5761542	A	C	A	Sox2_MA0143.3	6	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr22	26653154	26653155	chr22:26653155:A:G	rs16982554	A	G	A	Sox2_MA0143.3	-11	0	-	0	0	.
chr22	26665387	26665388	chr22:26665388:A:G	rs116383611	A	G	A	Sox2_MA0143.3	7	1	+	3.5547341015215945	8.864090315184848	CCTTTGTA
chr22	26672628	26672629	chr22:26672629:G:A	rs5761671	G	A	A	Sox2_MA0143.3	15	0	+	0	0	.
chr22	26745062	26745063	chr22:26745063:G:A	rs5997120	G	A	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr22	26756944	26756945	chr22:26756945:C:A	chr22:26756945:C:A	C	A	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr22	26796496	26796497	chr22:26796497:C:T	rs55926625	C	T	C	Sox2_MA0143.3	0	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr22	26836216	26836217	chr22:26836217:C:T	rs116177232	C	T	C	Sox2_MA0143.3	7	1	-	8.676919043985553	3.3675628303222993	CCATTGTG
chr22	26848721	26848722	chr22:26848722:G:A	rs2213770	G	A	G	Sox2_MA0143.3	10	0	+	0	0	.
chr22	26853388	26853389	chr22:26853389:G:A	rs136541	G	A	A	Sox2_MA0143.3	18	0	-	0	0	.
chr22	26949424	26949425	chr22:26949425:C:T	rs5761858	C	T	T	Sox2_MA0143.3	-5	0	+	0	0	.
chr22	26953135	26953136	chr22:26953136:G:A	rs966558	G	A	A	Sox2_MA0143.3	-7	0	+	0	0	.
chr22	26953152	26953153	chr22:26953153:T:G	rs966559	T	G	T	Sox2_MA0143.3	10	0	+	0	0	.
chr22	26973503	26973504	chr22:26973504:G:T	rs9608546	G	T	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr22	26973507	26973508	chr22:26973508:G:A	rs9608547	G	A	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr22	27090759	27090760	chr22:27090760:A:G	rs9608575	A	G	A	Sox2_MA0143.3	-16	0	+	0	0	.
chr22	27152313	27152314	chr22:27152314:G:A	rs35028684	G	A	G	Sox2_MA0143.3	15	0	+	0	0	.
chr22	27225189	27225190	chr22:27225190:G:A	rs535842	G	A	A	Sox2_MA0143.3	-13	0	-	0	0	.
chr22	27279274	27279275	chr22:27279275:C:A	rs9625196	C	A	C	Sox2_MA0143.3	22	0	+	0	0	.
chr22	27279276	27279277	chr22:27279277:A:T	rs134812	A	T	A	Sox2_MA0143.3	24	0	+	0	0	.
chr22	27346656	27346657	chr22:27346657:C:T	rs553327	C	T	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr22	27406469	27406470	chr22:27406470:A:G	rs16984531	A	G	A	Sox2_MA0143.3	4	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr22	27443499	27443500	chr22:27443500:G:A	rs718706	G	A	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr22	27468478	27468479	chr22:27468479:C:T	rs5762172	C	T	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr22	27468509	27468510	chr22:27468510:C:A	rs5762173	C	A	C	Sox2_MA0143.3	15	0	+	0	0	.
chr22	27497345	27497346	chr22:27497346:A:G	rs7289476	A	G	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr22	27513144	27513145	chr22:27513145:A:G	rs5762222	A	G	G	Sox2_MA0143.3	2	1	-	9.800647049772198	3.494828071296623	CCTTTGTT
chr22	27557952	27557953	chr22:27557953:T:C	rs4822909	T	C	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr22	27623948	27623949	chr22:27623949:C:T	rs5762282	C	T	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr22	27637049	27637050	chr22:27637050:A:G	rs17468634	A	G	A	Sox2_MA0143.3	-14	0	-	0	0	.
chr22	27671524	27671525	chr22:27671525:G:A	rs78260427	G	A	G	Sox2_MA0143.3	12	0	-	0	0	.
chr22	27679881	27679882	chr22:27679882:T:G	rs715559	T	G	T	Sox2_MA0143.3	20	0	+	0	0	.
chr22	27719357	27719358	chr22:27719358:A:T	rs4822932	A	T	T	Sox2_MA0143.3	22	0	-	0	0	.
chr22	27794425	27794426	chr22:27794426:A:T	rs5762358	A	T	A	Sox2_MA0143.3	-6	0	-	0	0	.
chr22	27916026	27916027	chr22:27916027:A:G	rs138700994	A	G	A	Sox2_MA0143.3	-6	0	-	0	0	.
chr22	27985848	27985849	chr22:27985849:A:G	rs138639	A	G	A	Sox2_MA0143.3	16	0	-	0	0	.
chr22	28009302	28009303	chr22:28009303:A:G	rs138664	A	G	A	Sox2_MA0143.3	22	0	-	0	0	.
chr22	28009316	28009317	chr22:28009317:A:T	rs142449408	A	T	A	Sox2_MA0143.3	8	0	-	0	0	.
chr22	28171372	28171373	chr22:28171373:C:T	rs35286067	C	T	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr22	28233724	28233725	chr22:28233725:C:T	rs16986177	C	T	T	Sox2_MA0143.3	-11	0	-	0	0	.
chr22	28712123	28712124	chr22:28712124:A:C	rs16986640	A	C	A	Sox2_MA0143.3	-7	0	+	0	0	.
chr22	28886213	28886214	chr22:28886214:T:G	rs565057646	T	G	T	Sox2_MA0143.3	-20	0	-	0	0	.
chr22	28892650	28892651	chr22:28892651:A:G	rs738457	A	G	A	Sox2_MA0143.3	2	1	+	8.676919043985553	2.5582713367092715	CCATTGTG
chr22	28999980	28999981	chr22:28999981:A:G	rs10483152	A	G	A	Sox2_MA0143.3	16	0	+	0	0	.
chr22	29103333	29103334	chr22:29103334:T:A	rs766372881	T	A	T	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr22	29140102	29140103	chr22:29140103:C:T	rs9625720	C	T	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr22	29158541	29158542	chr22:29158542:A:G	rs132295	A	G	G	Sox2_MA0143.3	17	0	-	0	0	.
chr22	29164286	29164287	chr22:29164287:G:A	rs76812119	G	A	g	Sox2_MA0143.3	8	0	+	0	0	.
chr22	29167478	29167479	chr22:29167479:C:T	rs139543538	C	T	c	Sox2_MA0143.3	-18	0	+	0	0	.
chr22	29167523	29167524	chr22:29167524:C:T	rs115324634	C	T	c	Sox2_MA0143.3	27	0	+	0	0	.
chr22	29209233	29209234	chr22:29209234:G:A	rs190285035	G	A	G	Sox2_MA0143.3	-2	0	+	0	0	.
chr22	29209254	29209255	chr22:29209255:T:G	chr22:29209255:T:G	T	G	T	Sox2_MA0143.3	19	0	+	0	0	.
chr22	29268601	29268602	chr22:29268602:G:T	rs535706908	G	T	G	Sox2_MA0143.3	-5	0	+	0	0	.
chr22	29268620	29268621	chr22:29268621:T:G	chr22:29268621:T:G	T	G	T	Sox2_MA0143.3	14	0	+	0	0	.
chr22	29287568	29287569	chr22:29287569:A:T	rs72547435	A	T	A	Sox2_MA0143.3	25	0	+	0	0	.
chr22	29359841	29359842	chr22:29359842:G:A	rs143484030	G	A	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr22	29369392	29369393	chr22:29369393:A:T	rs2267133	A	T	T	Sox2_MA0143.3	15	0	+	0	0	.
chr22	29393031	29393032	chr22:29393032:T:C	rs5752907	T	C	C	Sox2_MA0143.3	9	0	-	0	0	.
chr22	29409172	29409173	chr22:29409173:C:T	rs71329479	C	T	c	Sox2_MA0143.3	0	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr22	29440936	29440937	chr22:29440937:T:C	rs5763240	T	C	c	Sox2_MA0143.3	19	0	+	0	0	.
chr22	29531608	29531609	chr22:29531609:C:T	rs9613940	C	T	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr22	29558603	29558604	chr22:29558604:G:A	rs469230	G	A	G	Sox2_MA0143.3	18	0	-	0	0	.
chr22	29585132	29585133	chr22:29585133:G:A	rs61056759	G	A	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr22	29677579	29677580	chr22:29677580:C:A	rs2348688	C	A	A	Sox2_MA0143.3	-11	0	+	0	0	.
chr22	29732375	29732376	chr22:29732376:A:G	rs1264523668	A	G	A	Sox2_MA0143.3	27	0	-	0	0	.
chr22	29732390	29732391	chr22:29732391:C:T	rs140101	C	T	C	Sox2_MA0143.3	12	0	-	0	0	.
chr22	29734125	29734126	chr22:29734126:A:T	rs140105	A	T	T	Sox2_MA0143.3	18	0	-	0	0	.
chr22	29880082	29880083	chr22:29880083:C:G	rs76165510	C	G	C	Sox2_MA0143.3	19	0	-	0	0	.
chr22	30062424	30062425	chr22:30062425:G:A	rs193481	G	A	-	Sox2_MA0143.3	24	0	-	0	0	.
chr22	30150255	30150256	chr22:30150256:C:T	rs9620953	C	T	c	Sox2_MA0143.3	13	0	+	0	0	.
chr22	30196497	30196498	chr22:30196498:C:G	rs713875	C	G	C	Sox2_MA0143.3	18	0	-	0	0	.
chr22	30205933	30205934	chr22:30205934:T:C	rs1263578473	T	C	T	Sox2_MA0143.3	6	1	+	9.206767037375712	2.298012258060492	CCTTTGTC
chr22	30223705	30223706	chr22:30223706:G:T	rs17728983	G	T	G	Sox2_MA0143.3	7	1	+	8.864090315184848	9.800647049772198	CCTTTGTG
chr22	30309587	30309588	chr22:30309588:G:A	rs144428830	G	A	G	Sox2_MA0143.3	0	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr22	30311582	30311583	chr22:30311583:T:A	chr22:30311583:T:A	T	A	T	Sox2_MA0143.3	-9	0	-	0	0	.
chr22	30354807	30354808	chr22:30354808:C:T	rs948079256	C	T	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr22	30427208	30427209	chr22:30427209:T:C	rs5753130	T	C	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr22	30445279	30445280	chr22:30445280:C:T	rs5997649	C	T	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr22	30445322	30445323	chr22:30445323:G:A	rs559866602	G	A	G	Sox2_MA0143.3	24	0	+	0	0	.
chr22	30534170	30534171	chr22:30534171:T:C	rs2899151	T	C	C	Sox2_MA0143.3	15	0	-	0	0	.
chr22	30592074	30592075	chr22:30592075:T:C	chr22:30592075:T:C	T	C	T	Sox2_MA0143.3	-1	0	-	0	0	.
chr22	30607058	30607059	chr22:30607059:A:G	rs374830083	A	G	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr22	30607081	30607082	chr22:30607082:C:T	rs5753231	C	T	C	Sox2_MA0143.3	10	0	+	0	0	.
chr22	30717836	30717837	chr22:30717837:A:G	rs76424491	A	G	A	Sox2_MA0143.3	6	1	-	9.019595766176417	2.110840986861197	CCATTGTC
chr22	30717840	30717841	chr22:30717841:T:C	rs11089471	T	C	T	Sox2_MA0143.3	2	1	-	9.019595766176417	2.900948058900136	CCATTGTC
chr22	30805818	30805819	chr22:30805819:G:A	rs136258	G	A	G	Sox2_MA0143.3	7	1	-	9.206767037375712	9.800647049772198	CCTTTGTC
chr22	30806387	30806388	chr22:30806388:T:A	rs80062159	T	A	T	Sox2_MA0143.3	8	0	-	0	0	.
chr22	30831385	30831386	chr22:30831386:A:G	rs5753336	A	G	A	Sox2_MA0143.3	2	1	+	8.676919043985553	2.5582713367092715	CCATTGTG
chr22	30841506	30841507	chr22:30841507:G:T	rs190493512	G	T	G	Sox2_MA0143.3	5	1	+	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr22	30872141	30872142	chr22:30872142:G:A	rs5994353	G	A	A	Sox2_MA0143.3	-9	0	+	0	0	.
chr22	30944311	30944312	chr22:30944312:A:G	rs11089484	A	G	G	Sox2_MA0143.3	16	0	-	0	0	.
chr22	30968802	30968803	chr22:30968803:C:T	rs866879953	C	T	C	Sox2_MA0143.3	27	0	+	0	0	.
chr22	31053249	31053250	chr22:31053250:G:T	rs76627409	G	T	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr22	31614165	31614166	chr22:31614166:A:G	rs139147200	A	G	A	Sox2_MA0143.3	15	0	-	0	0	.
chr22	31625839	31625840	chr22:31625840:G:A	rs374284783	G	A	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr22	31625849	31625850	chr22:31625850:C:T	rs11556539	C	T	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr22	31628993	31628994	chr22:31628994:A:G	rs11703808	A	G	A	Sox2_MA0143.3	7	1	-	9.613475778572903	9.019595766176417	CCATTGTT
chr22	31748746	31748747	chr22:31748747:C:T	rs140260976	C	T	C	Sox2_MA0143.3	15	0	-	0	0	.
chr22	31802486	31802487	chr22:31802487:G:A	rs16989498	G	A	G	Sox2_MA0143.3	17	0	-	0	0	.
chr22	31865985	31865986	chr22:31865986:A:C	rs140833380	A	C	A	Sox2_MA0143.3	-18	0	-	0	0	.
chr22	31917946	31917947	chr22:31917947:C:T	rs5753818	C	T	T	Sox2_MA0143.3	23	0	-	0	0	.
chr22	31939429	31939430	chr22:31939430:G:A	rs9609389	G	A	G	Sox2_MA0143.3	5	1	+	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr22	31945970	31945971	chr22:31945971:A:G	rs7291050	A	G	A	Sox2_MA0143.3	3	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr22	31947520	31947521	chr22:31947521:A:G	rs188311886	A	G	A	Sox2_MA0143.3	3	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr22	32020240	32020241	chr22:32020241:G:A	rs74924328	G	A	A	Sox2_MA0143.3	-18	0	-	0	0	.
chr22	32029994	32029995	chr22:32029995:T:C	rs79592563	T	C	C	Sox2_MA0143.3	27	0	-	0	0	.
chr22	32043006	32043007	chr22:32043007:G:A	rs111361054	G	A	G	Sox2_MA0143.3	14	0	+	0	0	.
chr22	32073464	32073465	chr22:32073465:C:T	rs117517889	C	T	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr22	32221074	32221075	chr22:32221075:G:A	rs5998317	G	A	A	Sox2_MA0143.3	-16	0	+	0	0	.
chr22	32378942	32378943	chr22:32378943:C:T	rs73166393	C	T	.	Sox2_MA0143.3	16	0	-	0	0	.
chr22	32378943	32378944	chr22:32378944:G:A	rs8139992	G	A	.	Sox2_MA0143.3	15	0	-	0	0	.
chr22	32378956	32378957	chr22:32378957:T:C	rs9621435	T	C	.	Sox2_MA0143.3	2	1	-	9.019595766176417	2.900948058900136	CCATTGTC
chr22	32378972	32378973	chr22:32378973:G:T	rs5749414	G	T	.	Sox2_MA0143.3	-14	0	-	0	0	.
chr22	32411639	32411640	chr22:32411640:C:T	rs77840988	C	T	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr22	32487356	32487357	chr22:32487357:A:G	rs4821066	A	G	G	Sox2_MA0143.3	2	1	-	9.800647049772198	3.494828071296623	CCTTTGTT
chr22	32539580	32539581	chr22:32539581:C:T	rs5754139	C	T	C	Sox2_MA0143.3	14	0	-	0	0	.
chr22	32543113	32543114	chr22:32543114:G:A	rs77723561	G	A	G	Sox2_MA0143.3	7	1	+	8.864090315184848	3.5547341015215945	CCTTTGTG
chr22	32557271	32557272	chr22:32557272:A:G	rs2710385	A	G	A	Sox2_MA0143.3	3	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr22	32583000	32583001	chr22:32583001:G:A	rs4821077	G	A	G	Sox2_MA0143.3	5	1	+	9.206767037375712	2.298012258060492	CCTTTGTC
chr22	32622194	32622195	chr22:32622195:A:G	rs572126974	A	G	A	Sox2_MA0143.3	4	1	-	8.864090315184848	1.9553355358696274	CCTTTGTG
chr22	32653418	32653419	chr22:32653419:G:C	rs4821081	G	C	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr22	32661950	32661951	chr22:32661951:A:G	rs12166565	A	G	A	Sox2_MA0143.3	-3	0	-	0	0	.
chr22	32764392	32764393	chr22:32764393:C:T	rs73156473	C	T	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr22	32764410	32764411	chr22:32764411:C:T	rs3788504	C	T	C	Sox2_MA0143.3	15	0	+	0	0	.
chr22	32789177	32789178	chr22:32789178:A:C	rs763892899	A	C	A	Sox2_MA0143.3	-11	0	-	0	0	.
chr22	32842760	32842761	chr22:32842761:G:A	rs114121977	G	A	G	Sox2_MA0143.3	13	0	-	0	0	.
chr22	32856236	32856237	chr22:32856237:C:G	rs1427376	C	G	C	Sox2_MA0143.3	12	0	+	0	0	.
chr22	32861334	32861335	chr22:32861335:T:C	rs1427384	T	C	C	Sox2_MA0143.3	12	0	+	0	0	.
chr22	32987504	32987505	chr22:32987505:G:C	rs241714	G	C	C	Sox2_MA0143.3	10	0	-	0	0	.
chr22	33112331	33112332	chr22:33112332:A:G	rs137304	A	G	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr22	33190630	33190631	chr22:33190631:A:G	rs5994691	A	G	A	Sox2_MA0143.3	3	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr22	33190633	33190634	chr22:33190634:G:A	rs5994692	G	A	G	Sox2_MA0143.3	0	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr22	33389124	33389125	chr22:33389125:A:G	rs5998904	A	G	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr22	33544220	33544221	chr22:33544221:A:G	rs929879157	A	G	A	Sox2_MA0143.3	19	0	+	0	0	.
chr22	33578267	33578268	chr22:33578268:T:C	rs5749633	T	C	T	Sox2_MA0143.3	-19	0	+	0	0	.
chr22	33652266	33652267	chr22:33652267:T:G	rs9609853	T	G	T	Sox2_MA0143.3	-6	0	-	0	0	.
chr22	33710758	33710759	chr22:33710759:G:A	rs6518838	G	A	A	Sox2_MA0143.3	-20	0	-	0	0	.
chr22	33723911	33723912	chr22:33723912:C:T	rs239316	C	T	T	Sox2_MA0143.3	5	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr22	33825202	33825203	chr22:33825203:G:A	rs62227786	G	A	G	Sox2_MA0143.3	-9	0	+	0	0	.
chr22	33873337	33873338	chr22:33873338:C:T	rs55929802	C	T	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr22	33874174	33874175	chr22:33874175:A:G	rs16985375	A	G	A	Sox2_MA0143.3	8	0	+	0	0	.
chr22	33986981	33986982	chr22:33986982:C:T	rs36099916	C	T	T	Sox2_MA0143.3	-8	0	-	0	0	.
chr22	34225258	34225259	chr22:34225259:A:T	rs762852	A	T	T	Sox2_MA0143.3	18	0	-	0	0	.
chr22	34297861	34297862	chr22:34297862:A:G	rs5994896	A	G	A	Sox2_MA0143.3	-9	0	+	0	0	.
chr22	34332595	34332596	chr22:34332596:G:C	rs398878	G	C	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr22	34344712	34344713	chr22:34344713:A:C	rs738959	A	C	A	Sox2_MA0143.3	-13	0	+	0	0	.
chr22	34427196	34427197	chr22:34427197:T:G	rs67124616	T	G	T	Sox2_MA0143.3	-5	0	-	0	0	.
chr22	34538355	34538356	chr22:34538356:T:C	rs2413241	T	C	T	Sox2_MA0143.3	-12	0	+	0	0	.
chr22	34633828	34633829	chr22:34633829:G:A	rs738253	G	A	A	Sox2_MA0143.3	8	0	-	0	0	.
chr22	34668928	34668929	chr22:34668929:C:T	rs4630867	C	T	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr22	34761007	34761008	chr22:34761008:A:T	rs137259	A	T	A	Sox2_MA0143.3	6	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr22	34822335	34822336	chr22:34822336:A:C	rs4821312	A	C	A	Sox2_MA0143.3	-11	0	+	0	0	.
chr22	34866673	34866674	chr22:34866674:G:C	rs5995024	G	C	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr22	35158543	35158544	chr22:35158544:C:A	rs116973367	C	A	c	Sox2_MA0143.3	-18	0	+	0	0	.
chr22	35158588	35158589	chr22:35158589:G:A	rs134277	G	A	g	Sox2_MA0143.3	27	0	+	0	0	.
chr22	35171382	35171383	chr22:35171383:G:T	rs134367	G	T	G	Sox2_MA0143.3	10	0	-	0	0	.
chr22	35171394	35171395	chr22:35171395:G:A	rs134368	G	A	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr22	35171395	35171396	chr22:35171396:T:G	rs134369	T	G	G	Sox2_MA0143.3	-3	0	-	0	0	.
chr22	35250867	35250868	chr22:35250868:A:C	rs1543302	A	C	A	Sox2_MA0143.3	20	0	-	0	0	.
chr22	35351122	35351123	chr22:35351123:G:A	chr22:35351123:G:A	G	A	G	Sox2_MA0143.3	0	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr22	35358088	35358089	chr22:35358089:C:T	rs79453165	C	T	C	Sox2_MA0143.3	10	0	-	0	0	.
chr22	35358118	35358119	chr22:35358119:G:A	rs5750102	G	A	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr22	35379285	35379286	chr22:35379286:C:T	chr22:35379286:C:T	C	T	c	Sox2_MA0143.3	-10	0	+	0	0	.
chr22	35465214	35465215	chr22:35465215:T:A	rs28652751	T	A	A	Sox2_MA0143.3	-18	0	-	0	0	.
chr22	35523741	35523742	chr22:35523742:G:A	rs5995114	G	A	G	Sox2_MA0143.3	14	0	+	0	0	.
chr22	35523742	35523743	chr22:35523743:T:C	rs73883442	T	C	t	Sox2_MA0143.3	15	0	+	0	0	.
chr22	35586752	35586753	chr22:35586753:G:A	rs932332	G	A	A	Sox2_MA0143.3	22	0	+	0	0	.
chr22	35620424	35620425	chr22:35620425:T:C	rs1997882	T	C	C	Sox2_MA0143.3	20	0	+	0	0	.
chr22	35621178	35621179	chr22:35621179:T:G	rs73405618	T	G	T	Sox2_MA0143.3	8	0	+	0	0	.
chr22	35641030	35641031	chr22:35641031:C:T	rs5755807	C	T	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr22	35849367	35849368	chr22:35849368:T:A	rs74484641	T	A	T	Sox2_MA0143.3	-19	0	+	0	0	.
chr22	36098161	36098162	chr22:36098162:T:G	rs68086407	T	G	-	Sox2_MA0143.3	20	0	+	0	0	.
chr22	36180501	36180502	chr22:36180502:T:C	rs13053532	T	C	t	Sox2_MA0143.3	18	0	-	0	0	.
chr22	36188664	36188665	chr22:36188665:A:G	rs132697	A	G	a	Sox2_MA0143.3	10	0	-	0	0	.
chr22	36218953	36218954	chr22:36218954:C:A	rs11704302	C	A	C	Sox2_MA0143.3	0	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr22	36267955	36267956	chr22:36267956:G:A	rs2012928	G	A	a	Sox2_MA0143.3	-19	0	+	0	0	.
chr22	36274962	36274963	chr22:36274963:A:G	rs9622367	A	G	a	Sox2_MA0143.3	9	0	-	0	0	.
chr22	36278041	36278042	chr22:36278042:G:A	rs73405713	G	A	G	Sox2_MA0143.3	0	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr22	36369957	36369958	chr22:36369958:T:C	rs933224	T	C	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr22	36420543	36420544	chr22:36420544:A:G	rs78959759	A	G	A	Sox2_MA0143.3	3	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr22	36435939	36435940	chr22:36435940:C:T	rs79341722	C	T	C	Sox2_MA0143.3	11	0	-	0	0	.
chr22	36489551	36489552	chr22:36489552:A:G	rs2281084	A	G	G	Sox2_MA0143.3	2	1	+	8.676919043985553	2.5582713367092715	CCATTGTG
chr22	36492018	36492019	chr22:36492019:C:T	rs5756214	C	T	T	Sox2_MA0143.3	7	1	-	8.864090315184848	3.5547341015215945	CCTTTGTG
chr22	36562572	36562573	chr22:36562573:G:A	rs9619613	G	A	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr22	36574319	36574320	chr22:36574320:C:T	rs544948456	C	T	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr22	36581971	36581972	chr22:36581972:T:G	rs9622420	T	G	T	Sox2_MA0143.3	-5	0	+	0	0	.
chr22	36763305	36763306	chr22:36763306:G:A	rs3926888	G	A	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr22	36763348	36763349	chr22:36763349:C:T	rs1475995	C	T	c	Sox2_MA0143.3	23	0	+	0	0	.
chr22	36772593	36772594	chr22:36772594:A:G	rs4821523	A	G	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr22	36798839	36798840	chr22:36798840:A:G	rs2413422	A	G	A	Sox2_MA0143.3	9	0	+	0	0	.
chr22	36816491	36816492	chr22:36816492:A:C	rs762920	A	C	C	Sox2_MA0143.3	2	1	-	9.800647049772198	3.494828071296623	CCTTTGTT
chr22	36833413	36833414	chr22:36833414:A:G	rs73884071	A	G	A	Sox2_MA0143.3	12	0	-	0	0	.
chr22	36875388	36875389	chr22:36875389:C:A	rs4821552	C	A	C	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr22	36927547	36927548	chr22:36927548:C:A	rs6000492	C	A	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr22	36951264	36951265	chr22:36951265:T:G	rs5756422	T	G	-	Sox2_MA0143.3	6	1	+	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr22	36952679	36952680	chr22:36952680:C:A	rs8138449	C	A	A	Sox2_MA0143.3	20	0	+	0	0	.
chr22	37043660	37043661	chr22:37043661:G:C	rs7285681	G	C	G	Sox2_MA0143.3	10	0	-	0	0	.
chr22	37051427	37051428	chr22:37051428:C:T	rs12160438	C	T	T	Sox2_MA0143.3	19	0	-	0	0	.
chr22	37108116	37108117	chr22:37108117:A:C	rs228913	A	C	C	Sox2_MA0143.3	23	0	-	0	0	.
chr22	37148057	37148058	chr22:37148058:A:C	rs146101806	A	C	A	Sox2_MA0143.3	19	0	-	0	0	.
chr22	37148066	37148067	chr22:37148067:A:G	rs12160547	A	G	G	Sox2_MA0143.3	10	0	-	0	0	.
chr22	37178810	37178811	chr22:37178811:G:C	rs145603784	G	C	G	Sox2_MA0143.3	10	0	-	0	0	.
chr22	37178946	37178947	chr22:37178947:C:T	rs5995393	C	T	C	Sox2_MA0143.3	0	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr22	37179936	37179937	chr22:37179937:G:A	rs4821595	G	A	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr22	37210363	37210364	chr22:37210364:G:A	rs35685849	G	A	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr22	37210375	37210376	chr22:37210376:C:G	rs143709230	C	G	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr22	37257516	37257517	chr22:37257517:T:C	rs62235107	T	C	T	Sox2_MA0143.3	4	1	+	8.676919043985553	1.7681642646703322	CCATTGTG
chr22	37289697	37289698	chr22:37289698:G:A	rs5756595	G	A	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr22	37491471	37491472	chr22:37491472:G:C	rs9622628	G	C	g	Sox2_MA0143.3	1	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr22	37500801	37500802	chr22:37500802:A:G	rs742153	A	G	G	Sox2_MA0143.3	17	0	-	0	0	.
chr22	37513007	37513008	chr22:37513008:A:G	rs738299	A	G	A	Sox2_MA0143.3	-16	0	+	0	0	.
chr22	37547424	37547425	chr22:37547425:C:G	rs12166327	C	G	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr22	37589950	37589951	chr22:37589951:A:G	rs115097647	A	G	G	Sox2_MA0143.3	-14	0	+	0	0	.
chr22	37589958	37589959	chr22:37589959:G:A	rs190350602	G	A	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr22	37592170	37592171	chr22:37592171:C:T	rs80242198	C	T	C	Sox2_MA0143.3	18	0	-	0	0	.
chr22	37689467	37689468	chr22:37689468:A:G	rs762990	A	G	G	Sox2_MA0143.3	25	0	+	0	0	.
chr22	37863752	37863753	chr22:37863753:A:G	chr22:37863753:A:G	A	G	A	Sox2_MA0143.3	-10	0	-	0	0	.
chr22	38127057	38127058	chr22:38127058:T:C	rs3827354	T	C	C	Sox2_MA0143.3	21	0	+	0	0	.
chr22	38167289	38167290	chr22:38167290:C:G	rs132984	C	G	G	Sox2_MA0143.3	27	0	-	0	0	.
chr22	38170323	38170324	chr22:38170324:C:T	rs132991	C	T	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr22	38172998	38172999	chr22:38172999:A:G	rs738322	A	G	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr22	38199232	38199233	chr22:38199233:C:T	rs5756968	C	T	T	Sox2_MA0143.3	20	0	+	0	0	.
chr22	38268782	38268783	chr22:38268783:G:A	rs5995562	G	A	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr22	38316969	38316970	chr22:38316970:C:T	rs567093492	C	T	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr22	38316994	38316995	chr22:38316995:G:C	chr22:38316995:G:C	G	C	G	Sox2_MA0143.3	14	0	+	0	0	.
chr22	38316999	38317000	chr22:38317000:G:A	rs771748513	G	A	G	Sox2_MA0143.3	19	0	+	0	0	.
chr22	38354913	38354914	chr22:38354914:A:G	rs575033011	A	G	A	Sox2_MA0143.3	7	1	-	9.800647049772198	9.206767037375712	CCTTTGTT
chr22	38458965	38458966	chr22:38458966:C:T	rs196069	C	T	C	Sox2_MA0143.3	20	0	-	0	0	.
chr22	38463054	38463055	chr22:38463055:T:C	rs138411	T	C	T	Sox2_MA0143.3	-11	0	+	0	0	.
chr22	38656356	38656357	chr22:38656357:C:T	rs879748413	C	T	C	Sox2_MA0143.3	10	0	-	0	0	.
chr22	38656359	38656360	chr22:38656360:A:G	rs146138698	A	G	A	Sox2_MA0143.3	7	1	-	9.613475778572903	9.019595766176417	CCATTGTT
chr22	38712627	38712628	chr22:38712628:C:T	rs16999281	C	T	c	Sox2_MA0143.3	-5	0	+	0	0	.
chr22	38754096	38754097	chr22:38754097:A:G	chr22:38754097:A:G	A	G	.	Sox2_MA0143.3	12	0	-	0	0	.
chr22	38776280	38776281	chr22:38776281:C:T	rs4821823	C	T	C	Sox2_MA0143.3	21	0	+	0	0	.
chr22	38776334	38776335	chr22:38776335:A:T	rs4821824	A	T	A	Sox2_MA0143.3	-17	0	-	0	0	.
chr22	38797922	38797923	chr22:38797923:C:A	rs6001228	C	A	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr22	38824554	38824555	chr22:38824555:C:T	rs77400816	C	T	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr22	38864788	38864789	chr22:38864789:G:A	rs41280841	G	A	G	Sox2_MA0143.3	0	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr22	38874111	38874112	chr22:38874112:G:A	rs115660277	G	A	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr22	38973811	38973812	chr22:38973812:G:C	rs2076108	G	C	g	Sox2_MA0143.3	17	0	+	0	0	.
chr22	39046375	39046376	chr22:39046376:C:G	rs4820364	C	G	N	Sox2_MA0143.3	-11	0	-	0	0	.
chr22	39129675	39129676	chr22:39129676:T:A	rs967532057	T	A	T	Sox2_MA0143.3	-12	0	+	0	0	.
chr22	39165896	39165897	chr22:39165897:G:A	rs9611103	G	A	-	Sox2_MA0143.3	-12	0	-	0	0	.
chr22	39165898	39165899	chr22:39165899:T:C	rs5757504	T	C	-	Sox2_MA0143.3	-14	0	-	0	0	.
chr22	39191634	39191635	chr22:39191635:T:A	rs5757514	T	A	A	Sox2_MA0143.3	15	0	-	0	0	.
chr22	39234003	39234004	chr22:39234004:G:A	rs9611124	G	A	G	Sox2_MA0143.3	-16	0	-	0	0	.
chr22	39234510	39234511	chr22:39234511:G:A	rs112414624	G	A	G	Sox2_MA0143.3	27	0	-	0	0	.
chr22	39234521	39234522	chr22:39234522:C:T	rs144254032	C	T	C	Sox2_MA0143.3	16	0	-	0	0	.
chr22	39292260	39292261	chr22:39292261:G:A	rs576055166	G	A	G	Sox2_MA0143.3	-11	0	+	0	0	.
chr22	39292291	39292292	chr22:39292292:T:C	rs922935394	T	C	T	Sox2_MA0143.3	20	0	+	0	0	.
chr22	39292911	39292912	chr22:39292912:G:T	rs79861214	G	T	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr22	39301787	39301788	chr22:39301788:C:T	rs137610	C	T	T	Sox2_MA0143.3	-9	0	+	0	0	.
chr22	39310630	39310631	chr22:39310631:C:T	rs115642855	C	T	C	Sox2_MA0143.3	13	0	+	0	0	.
chr22	39521747	39521748	chr22:39521748:G:T	rs114210419	G	T	G	Sox2_MA0143.3	21	0	+	0	0	.
chr22	39523242	39523243	chr22:39523243:G:A	rs77780294	G	A	G	Sox2_MA0143.3	19	0	-	0	0	.
chr22	39577520	39577521	chr22:39577521:G:A	rs132567	G	A	A	Sox2_MA0143.3	-16	0	+	0	0	.
chr22	39706453	39706454	chr22:39706454:G:C	rs5750872	G	C	G	Sox2_MA0143.3	26	0	-	0	0	.
chr22	39710779	39710780	chr22:39710780:G:A	rs11704591	G	A	A	Sox2_MA0143.3	-11	0	-	0	0	.
chr22	39721391	39721392	chr22:39721392:G:A	rs10427663	G	A	A	Sox2_MA0143.3	13	0	+	0	0	.
chr22	39967283	39967284	chr22:39967284:A:G	rs930999708	A	G	A	Sox2_MA0143.3	-3	0	-	0	0	.
chr22	39967295	39967296	chr22:39967296:G:A	rs1046834155	G	A	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr22	40196704	40196705	chr22:40196705:A:T	rs188520357	A	T	A	Sox2_MA0143.3	23	0	+	0	0	.
chr22	40217068	40217069	chr22:40217069:A:G	rs138023	A	G	G	Sox2_MA0143.3	25	0	+	0	0	.
chr22	40236042	40236043	chr22:40236043:A:C	rs4821935	A	C	C	Sox2_MA0143.3	6	1	-	9.613475778572903	2.7047209992576837	CCATTGTT
chr22	40236067	40236068	chr22:40236068:T:C	rs183091721	T	C	T	Sox2_MA0143.3	-19	0	-	0	0	.
chr22	40340467	40340468	chr22:40340468:G:A	rs12484697	G	A	A	Sox2_MA0143.3	25	0	+	0	0	.
chr22	40449593	40449594	chr22:40449594:C:T	rs17001917	C	T	C	Sox2_MA0143.3	16	0	-	0	0	.
chr22	40499805	40499806	chr22:40499806:C:A	rs73167098	C	A	A	Sox2_MA0143.3	-20	0	+	0	0	.
chr22	40511673	40511674	chr22:40511674:A:G	rs768377804	A	G	A	Sox2_MA0143.3	8	0	-	0	0	.
chr22	40594218	40594219	chr22:40594219:G:A	rs181387000	G	A	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr22	41057679	41057680	chr22:41057680:C:G	rs5995988	C	G	C	Sox2_MA0143.3	14	0	-	0	0	.
chr22	41091626	41091627	chr22:41091627:A:G	rs576917353	A	G	A	Sox2_MA0143.3	-7	0	+	0	0	.
chr22	41091629	41091630	chr22:41091630:T:C	chr22:41091630:T:C	T	C	T	Sox2_MA0143.3	-4	0	+	0	0	.
chr22	41248069	41248070	chr22:41248070:C:T	rs1983631	C	T	T	Sox2_MA0143.3	-8	0	-	0	0	.
chr22	41249080	41249081	chr22:41249081:A:G	rs139499	A	G	a	Sox2_MA0143.3	-10	0	-	0	0	.
chr22	41305894	41305895	chr22:41305895:A:G	rs190863614	A	G	A	Sox2_MA0143.3	-6	0	+	0	0	.
chr22	41326859	41326860	chr22:41326860:T:C	rs3927	T	C	T	Sox2_MA0143.3	3	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr22	41333289	41333290	chr22:41333290:T:G	rs2235845	T	G	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr22	41468695	41468696	chr22:41468696:G:C	rs112844862	G	C	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr22	41468736	41468737	chr22:41468737:G:A	rs183050754	G	A	G	Sox2_MA0143.3	25	0	+	0	0	.
chr22	41508739	41508740	chr22:41508740:G:A	rs551503744	G	A	G	Sox2_MA0143.3	5	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr22	41565826	41565827	chr22:41565827:T:C	rs9611613	T	C	t	Sox2_MA0143.3	23	0	+	0	0	.
chr22	41740925	41740926	chr22:41740926:T:C	rs8141103	T	C	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr22	41908751	41908752	chr22:41908752:C:T	rs9611691	C	T	C	Sox2_MA0143.3	22	0	+	0	0	.
chr22	41940778	41940779	chr22:41940779:C:T	rs12483944	C	T	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr22	41966555	41966556	chr22:41966556:A:G	rs4822075	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr22	41966646	41966647	chr22:41966647:G:C	rs75674686	G	C	G	Sox2_MA0143.3	-12	0	+	0	0	.
chr22	41966651	41966652	chr22:41966652:G:A	rs73885875	G	A	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr22	41977643	41977644	chr22:41977644:C:T	rs739293	C	T	T	Sox2_MA0143.3	13	0	+	0	0	.
chr22	42085003	42085004	chr22:42085004:G:A	rs188838003	G	A	G	Sox2_MA0143.3	1	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr22	42115545	42115546	chr22:42115546:T:C	rs2839710	T	C	C	Sox2_MA0143.3	9	0	-	0	0	.
chr22	42261559	42261560	chr22:42261560:T:G	rs134873	T	G	T	Sox2_MA0143.3	-11	0	+	0	0	.
chr22	42293991	42293992	chr22:42293992:T:A	rs5758700	T	A	T	Sox2_MA0143.3	-6	0	-	0	0	.
chr22	42314069	42314070	chr22:42314070:C:T	rs116488881	C	T	C	Sox2_MA0143.3	17	0	+	0	0	.
chr22	42340390	42340391	chr22:42340391:C:A	rs73886046	C	A	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr22	42585342	42585343	chr22:42585343:C:T	rs137087	C	T	T	Sox2_MA0143.3	-11	0	+	0	0	.
chr22	42644723	42644724	chr22:42644724:A:T	rs564225981	A	T	A	Sox2_MA0143.3	-15	0	+	0	0	.
chr22	42649872	42649873	chr22:42649873:G:A	rs115879497	G	A	G	Sox2_MA0143.3	18	0	+	0	0	.
chr22	42670920	42670921	chr22:42670921:A:G	rs140811667	A	G	A	Sox2_MA0143.3	21	0	-	0	0	.
chr22	42684784	42684785	chr22:42684785:T:G	rs140725954	T	G	T	Sox2_MA0143.3	-4	0	-	0	0	.
chr22	42684785	42684786	chr22:42684786:G:A	rs130371	G	A	A	Sox2_MA0143.3	-5	0	-	0	0	.
chr22	42702764	42702765	chr22:42702765:C:A	rs5751343	C	A	-	Sox2_MA0143.3	-17	0	-	0	0	.
chr22	42752314	42752315	chr22:42752315:G:C	rs78812795	G	C	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr22	42829959	42829960	chr22:42829960:T:C	rs75865036	T	C	T	Sox2_MA0143.3	3	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr22	42830592	42830593	chr22:42830593:C:A	rs5758965	C	A	C	Sox2_MA0143.3	14	0	-	0	0	.
chr22	42839971	42839972	chr22:42839972:C:T	rs9611930	C	T	C	Sox2_MA0143.3	18	0	-	0	0	.
chr22	42870240	42870241	chr22:42870241:G:A	rs753086	G	A	G	Sox2_MA0143.3	-3	0	-	0	0	.
chr22	42924278	42924279	chr22:42924279:T:G	rs5759039	T	G	G	Sox2_MA0143.3	19	0	+	0	0	.
chr22	42972043	42972044	chr22:42972044:A:G	rs5751406	A	G	G	Sox2_MA0143.3	4	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr22	43007017	43007018	chr22:43007018:T:C	rs4822246	T	C	T	Sox2_MA0143.3	11	0	+	0	0	.
chr22	43007030	43007031	chr22:43007031:A:C	rs181681173	A	C	A	Sox2_MA0143.3	24	0	+	0	0	.
chr22	43038958	43038959	chr22:43038959:T:C	rs74529689	T	C	t	Sox2_MA0143.3	25	0	-	0	0	.
chr22	43104191	43104192	chr22:43104192:C:A	rs56144211	C	A	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr22	43104205	43104206	chr22:43104206:G:T	rs5759167	G	T	G	Sox2_MA0143.3	8	0	+	0	0	.
chr22	43152733	43152734	chr22:43152734:G:A	rs537347112	G	A	G	Sox2_MA0143.3	17	0	+	0	0	.
chr22	43154142	43154143	chr22:43154143:T:C	rs5759197	T	C	C	Sox2_MA0143.3	23	0	-	0	0	.
chr22	43171272	43171273	chr22:43171273:C:A	rs62232065	C	A	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr22	43184045	43184046	chr22:43184046:T:C	rs1323534013	T	C	T	Sox2_MA0143.3	-20	0	+	0	0	.
chr22	43184058	43184059	chr22:43184059:C:T	rs743808	C	T	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr22	43184170	43184171	chr22:43184171:C:T	rs35670575	C	T	C	Sox2_MA0143.3	23	0	-	0	0	.
chr22	43184213	43184214	chr22:43184214:T:C	rs10427835	T	C	T	Sox2_MA0143.3	-20	0	-	0	0	.
chr22	43188274	43188275	chr22:43188275:T:G	rs138958	T	G	T	Sox2_MA0143.3	-10	0	-	0	0	.
chr22	43275848	43275849	chr22:43275849:A:G	rs116754302	A	G	A	Sox2_MA0143.3	14	0	-	0	0	.
chr22	43288512	43288513	chr22:43288513:T:A	rs4822273	T	A	g	Sox2_MA0143.3	-20	0	+	0	0	.
chr22	43292326	43292327	chr22:43292327:C:G	rs73424026	C	G	C	Sox2_MA0143.3	5	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr22	43292333	43292334	chr22:43292334:C:T	rs112953652	C	T	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr22	43292497	43292498	chr22:43292498:T:C	rs75327112	T	C	T	Sox2_MA0143.3	15	0	-	0	0	.
chr22	43293674	43293675	chr22:43293675:T:C	rs115628961	T	C	T	Sox2_MA0143.3	-11	0	-	0	0	.
chr22	43308045	43308046	chr22:43308046:A:C	rs9623807	A	C	A	Sox2_MA0143.3	23	0	-	0	0	.
chr22	43365861	43365862	chr22:43365862:A:G	rs761743	A	G	G	Sox2_MA0143.3	-3	0	-	0	0	.
chr22	43393262	43393263	chr22:43393263:C:G	rs2015868	C	G	G	Sox2_MA0143.3	26	0	+	0	0	.
chr22	43414838	43414839	chr22:43414839:T:C	rs12485150	T	C	C	Sox2_MA0143.3	17	0	+	0	0	.
chr22	43460745	43460746	chr22:43460746:T:C	rs34401744	T	C	T	Sox2_MA0143.3	8	0	+	0	0	.
chr22	43485813	43485814	chr22:43485814:T:C	rs28517761	T	C	C	Sox2_MA0143.3	-5	0	-	0	0	.
chr22	43554402	43554403	chr22:43554403:T:C	rs75578490	T	C	T	Sox2_MA0143.3	11	0	+	0	0	.
chr22	43624295	43624296	chr22:43624296:C:T	rs6006512	C	T	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr22	43827185	43827186	chr22:43827186:T:C	rs4149444	T	C	T	Sox2_MA0143.3	4	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr22	43878814	43878815	chr22:43878815:C:A	rs73176448	C	A	C	Sox2_MA0143.3	25	0	-	0	0	.
chr22	43878847	43878848	chr22:43878848:G:T	rs60398060	G	T	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr22	43896174	43896175	chr22:43896175:G:T	rs2213726	G	T	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr22	44026755	44026756	chr22:44026756:G:C	rs146623589	G	C	g	Sox2_MA0143.3	5	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr22	44026757	44026758	chr22:44026758:T:C	rs11914048	T	C	t	Sox2_MA0143.3	7	1	+	9.800647049772198	9.206767037375712	CCTTTGTT
chr22	44072185	44072186	chr22:44072186:C:A	rs9625980	C	A	C	Sox2_MA0143.3	15	0	+	0	0	.
chr22	44087399	44087400	chr22:44087400:T:G	rs910014	T	G	T	Sox2_MA0143.3	-4	0	+	0	0	.
chr22	44151790	44151791	chr22:44151791:G:A	rs148374847	G	A	G	Sox2_MA0143.3	13	0	+	0	0	.
chr22	44198595	44198596	chr22:44198596:T:C	rs139151	T	C	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr22	44203855	44203856	chr22:44203856:G:C	rs73163853	G	C	G	Sox2_MA0143.3	-9	0	+	0	0	.
chr22	44222823	44222824	chr22:44222824:C:T	rs139244	C	T	T	Sox2_MA0143.3	-19	0	+	0	0	.
chr22	44229585	44229586	chr22:44229586:G:A	rs9614379	G	A	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr22	44229617	44229618	chr22:44229618:T:C	rs139261	T	C	C	Sox2_MA0143.3	14	0	+	0	0	.
chr22	44243010	44243011	chr22:44243011:C:T	rs75703674	C	T	T	Sox2_MA0143.3	-13	0	+	0	0	.
chr22	44243019	44243020	chr22:44243020:C:T	rs74405208	C	T	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr22	44271275	44271276	chr22:44271276:C:A	rs135415	C	A	C	Sox2_MA0143.3	16	0	+	0	0	.
chr22	44271896	44271897	chr22:44271897:G:A	rs139863889	G	A	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr22	44276138	44276139	chr22:44276139:A:C	rs135406	A	C	A	Sox2_MA0143.3	-4	0	-	0	0	.
chr22	44311835	44311836	chr22:44311836:T:G	rs6519840	T	G	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr22	44325783	44325784	chr22:44325784:C:A	rs75073425	C	A	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr22	44394770	44394771	chr22:44394771:G:T	rs62228652	G	T	G	Sox2_MA0143.3	25	0	-	0	0	.
chr22	44397419	44397420	chr22:44397420:T:G	rs117822775	T	G	T	Sox2_MA0143.3	-8	0	+	0	0	.
chr22	44418299	44418300	chr22:44418300:A:G	rs135945	A	G	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr22	44421742	44421743	chr22:44421743:C:T	rs135954	C	T	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr22	44440626	44440627	chr22:44440627:T:C	rs73416719	T	C	T	Sox2_MA0143.3	2	1	-	9.613475778572903	3.494828071296623	CCATTGTT
chr22	44442691	44442692	chr22:44442692:A:C	rs2252296	A	C	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr22	44449992	44449993	chr22:44449993:G:A	rs117189147	G	A	G	Sox2_MA0143.3	26	0	+	0	0	.
chr22	44498284	44498285	chr22:44498285:C:T	rs1056296157	C	T	c	Sox2_MA0143.3	-7	0	+	0	0	.
chr22	44532723	44532724	chr22:44532724:T:C	rs75204238	T	C	T	Sox2_MA0143.3	-4	0	+	0	0	.
chr22	44536369	44536370	chr22:44536370:G:A	rs62228389	G	A	G	Sox2_MA0143.3	-11	0	+	0	0	.
chr22	44537233	44537234	chr22:44537234:G:T	rs11704450	G	T	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr22	44537312	44537313	chr22:44537313:A:C	rs114484251	A	C	A	Sox2_MA0143.3	14	0	-	0	0	.
chr22	44539350	44539351	chr22:44539351:A:G	rs4140639	A	G	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr22	44558576	44558577	chr22:44558577:A:G	rs73889506	A	G	A	Sox2_MA0143.3	-4	0	+	0	0	.
chr22	44593519	44593520	chr22:44593520:G:T	rs760757	G	T	T	Sox2_MA0143.3	1	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr22	44618029	44618030	chr22:44618030:G:C	rs9614844	G	C	C	Sox2_MA0143.3	26	0	-	0	0	.
chr22	44640334	44640335	chr22:44640335:C:T	rs113515735	C	T	c	Sox2_MA0143.3	25	0	-	0	0	.
chr22	44680570	44680571	chr22:44680571:C:T	rs9614876	C	T	c	Sox2_MA0143.3	-6	0	+	0	0	.
chr22	44860425	44860426	chr22:44860426:G:C	rs557315567	G	C	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr22	44860443	44860444	chr22:44860444:G:C	rs112470882	G	C	G	Sox2_MA0143.3	17	0	+	0	0	.
chr22	44956942	44956943	chr22:44956943:C:A	rs73422552	C	A	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr22	45000460	45000461	chr22:45000461:C:T	rs16993265	C	T	C	Sox2_MA0143.3	20	0	-	0	0	.
chr22	45157599	45157600	chr22:45157600:A:G	rs7293135	A	G	A	Sox2_MA0143.3	23	0	-	0	0	.
chr22	45197596	45197597	chr22:45197597:G:A	rs76054837	G	A	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr22	45225273	45225274	chr22:45225274:G:A	rs142396679	G	A	G	Sox2_MA0143.3	0	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr22	45225287	45225288	chr22:45225288:G:C	rs9615068	G	C	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr22	45240144	45240145	chr22:45240145:C:A	rs183686311	C	A	C	Sox2_MA0143.3	13	0	-	0	0	.
chr22	45329510	45329511	chr22:45329511:T:C	rs742013	T	C	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr22	45483102	45483103	chr22:45483103:G:A	rs5765397	G	A	A	Sox2_MA0143.3	23	0	-	0	0	.
chr22	45501790	45501791	chr22:45501791:G:A	rs62224998	G	A	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr22	45647623	45647624	chr22:45647624:C:T	rs148694919	C	T	C	Sox2_MA0143.3	15	0	-	0	0	.
chr22	45649012	45649013	chr22:45649013:G:C	rs134849	G	C	C	Sox2_MA0143.3	13	0	-	0	0	.
chr22	45650596	45650597	chr22:45650597:A:G	rs134850	A	G	G	Sox2_MA0143.3	6	1	-	8.676919043985553	1.7681642646703326	CCATTGTG
chr22	45830791	45830792	chr22:45830792:C:T	rs80031504	C	T	C	Sox2_MA0143.3	13	0	+	0	0	.
chr22	45842637	45842638	chr22:45842638:G:A	rs13055814	G	A	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr22	45905086	45905087	chr22:45905087:A:G	rs9330797	A	G	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr22	45907762	45907763	chr22:45907763:A:G	rs9330818	A	G	G	Sox2_MA0143.3	22	0	-	0	0	.
chr22	45943378	45943379	chr22:45943379:G:A	rs73888715	G	A	G	Sox2_MA0143.3	18	0	+	0	0	.
chr22	46013897	46013898	chr22:46013898:C:T	rs769874065	C	T	C	Sox2_MA0143.3	1	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr22	46021012	46021013	chr22:46021013:T:G	rs28573881	T	G	T	Sox2_MA0143.3	-1	0	-	0	0	.
chr22	46061582	46061583	chr22:46061583:T:C	rs936091549	T	C	T	Sox2_MA0143.3	-20	0	+	0	0	.
chr22	46067439	46067440	chr22:46067440:A:G	rs142613343	A	G	A	Sox2_MA0143.3	-10	0	-	0	0	.
chr22	46072015	46072016	chr22:46072016:G:A	rs1018552292	G	A	g	Sox2_MA0143.3	-16	0	+	0	0	.
chr22	46099413	46099414	chr22:46099414:C:T	rs742901	C	T	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr22	46104301	46104302	chr22:46104302:A:G	rs150764669	A	G	A	Sox2_MA0143.3	-20	0	+	0	0	.
chr22	46109195	46109196	chr22:46109196:G:C	rs569720462	G	C	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr22	46122129	46122130	chr22:46122130:C:T	rs76432727	C	T	C	Sox2_MA0143.3	14	0	+	0	0	.
chr22	46196270	46196271	chr22:46196271:T:C	rs59842914	T	C	T	Sox2_MA0143.3	-2	0	+	0	0	.
chr22	46241032	46241033	chr22:46241033:C:T	rs41329344	C	T	C	Sox2_MA0143.3	23	0	-	0	0	.
chr22	46256084	46256085	chr22:46256085:A:G	rs56017104	A	G	A	Sox2_MA0143.3	6	1	-	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr22	46290065	46290066	chr22:46290066:G:A	rs6008538	G	A	A	Sox2_MA0143.3	18	0	+	0	0	.
chr22	46345709	46345710	chr22:46345710:C:T	rs140051	C	T	T	Sox2_MA0143.3	9	0	+	0	0	.
chr22	46358467	46358468	chr22:46358468:A:G	rs12165329	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr22	46358476	46358477	chr22:46358477:C:T	rs576705720	C	T	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr22	46368275	46368276	chr22:46368276:C:A	rs9627426	C	A	A	Sox2_MA0143.3	16	0	-	0	0	.
chr22	46418773	46418774	chr22:46418774:C:T	rs6008817	C	T	T	Sox2_MA0143.3	-12	0	-	0	0	.
chr22	46421423	46421424	chr22:46421424:A:G	rs16995232	A	G	A	Sox2_MA0143.3	24	0	-	0	0	.
chr22	46424672	46424673	chr22:46424673:T:C	rs6008821	T	C	T	Sox2_MA0143.3	17	0	+	0	0	.
chr22	46443814	46443815	chr22:46443815:C:T	rs115291354	C	T	C	Sox2_MA0143.3	23	0	+	0	0	.
chr22	46443996	46443997	chr22:46443997:C:T	rs73177086	C	T	C	Sox2_MA0143.3	15	0	-	0	0	.
chr22	46572158	46572159	chr22:46572159:T:C	rs2049935	T	C	C	Sox2_MA0143.3	6	1	+	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr22	46585982	46585983	chr22:46585983:T:C	rs76839260	T	C	T	Sox2_MA0143.3	4	1	+	9.206767037375712	2.2980122580604916	CCTTTGTC
chr22	46614512	46614513	chr22:46614513:C:T	chr22:46614513:C:T	C	T	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr22	46652226	46652227	chr22:46652227:G:A	rs6007950	G	A	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr22	46652873	46652874	chr22:46652874:T:G	rs2542022	T	G	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr22	46652894	46652895	chr22:46652895:A:G	rs5767318	A	G	A	Sox2_MA0143.3	20	0	+	0	0	.
chr22	46660658	46660659	chr22:46660659:A:G	rs2748335	A	G	A	Sox2_MA0143.3	13	0	+	0	0	.
chr22	46694198	46694199	chr22:46694199:G:A	rs16868	G	A	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr22	46731177	46731178	chr22:46731178:C:T	rs9616114	C	T	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr22	46735499	46735500	chr22:46735500:G:C	rs5769125	G	C	G	Sox2_MA0143.3	26	0	-	0	0	.
chr22	46735530	46735531	chr22:46735531:G:A	rs190092146	G	A	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr22	46754386	46754387	chr22:46754387:T:A	rs75151336	T	A	A	Sox2_MA0143.3	2	1	+	9.206767037375712	9.019595766176417	CCTTTGTC
chr22	46828857	46828858	chr22:46828858:G:C	rs74657749	G	C	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr22	46898638	46898639	chr22:46898639:C:A	rs762649	C	A	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr22	46900515	46900516	chr22:46900516:G:A	rs6007993	G	A	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr22	46916659	46916660	chr22:46916660:G:A	rs73478595	G	A	G	Sox2_MA0143.3	5	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr22	46948312	46948313	chr22:46948313:T:C	rs136068	T	C	t	Sox2_MA0143.3	27	0	+	0	0	.
chr22	46973763	46973764	chr22:46973764:T:C	rs136110	T	C	T	Sox2_MA0143.3	-9	0	+	0	0	.
chr22	47006751	47006752	chr22:47006752:G:T	rs185835608	G	T	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr22	47023619	47023620	chr22:47023620:A:G	rs131941	A	G	A	Sox2_MA0143.3	9	0	-	0	0	.
chr22	47033506	47033507	chr22:47033507:C:T	rs9626932	C	T	C	Sox2_MA0143.3	13	0	-	0	0	.
chr22	47045662	47045663	chr22:47045663:T:C	rs4480	T	C	C	Sox2_MA0143.3	24	0	+	0	0	.
chr22	47046163	47046164	chr22:47046164:A:C	rs131905	A	C	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr22	47062127	47062128	chr22:47062128:T:C	rs73170411	T	C	T	Sox2_MA0143.3	-10	0	+	0	0	.
chr22	47063516	47063517	chr22:47063517:T:C	rs35128011	T	C	C	Sox2_MA0143.3	22	0	+	0	0	.
chr22	47169433	47169434	chr22:47169434:G:A	rs1276139112	G	A	G	Sox2_MA0143.3	12	0	-	0	0	.
chr22	47392685	47392686	chr22:47392686:G:C	rs9615517	G	C	G	Sox2_MA0143.3	7	1	+	8.864090315184848	9.206767037375712	CCTTTGTG
chr22	47439783	47439784	chr22:47439784:G:A	rs374317625	G	A	G	Sox2_MA0143.3	-3	0	+	0	0	.
chr22	47645568	47645569	chr22:47645569:T:C	rs75456041	T	C	T	Sox2_MA0143.3	-6	0	-	0	0	.
chr22	47650139	47650140	chr22:47650140:A:G	rs5767881	A	G	A	Sox2_MA0143.3	3	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr22	47650154	47650155	chr22:47650155:G:A	rs79703620	G	A	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr22	47673219	47673220	chr22:47673220:C:A	rs1858751	C	A	C	Sox2_MA0143.3	16	0	+	0	0	.
chr22	47809790	47809791	chr22:47809791:C:T	rs73176728	C	T	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr22	47818501	47818502	chr22:47818502:T:C	rs6008406	T	C	T	Sox2_MA0143.3	-16	0	+	0	0	.
chr22	47818537	47818538	chr22:47818538:C:T	rs9615648	C	T	c	Sox2_MA0143.3	20	0	+	0	0	.
chr22	47826314	47826315	chr22:47826315:C:T	rs4823704	C	T	C	Sox2_MA0143.3	25	0	-	0	0	.
chr22	47850648	47850649	chr22:47850649:A:G	rs738745	A	G	A	Sox2_MA0143.3	13	0	-	0	0	.
chr22	47856737	47856738	chr22:47856738:G:A	rs11703500	G	A	G	Sox2_MA0143.3	27	0	+	0	0	.
chr22	47919799	47919800	chr22:47919800:T:C	rs5766941	T	C	C	Sox2_MA0143.3	18	0	+	0	0	.
chr22	47938369	47938370	chr22:47938370:T:C	rs5768202	T	C	C	Sox2_MA0143.3	11	0	+	0	0	.
chr22	47970946	47970947	chr22:47970947:C:T	rs9615244	C	T	C	Sox2_MA0143.3	13	0	-	0	0	.
chr22	47997554	47997555	chr22:47997555:G:A	rs135354	G	A	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr22	48061322	48061323	chr22:48061323:T:G	rs5768311	T	G	t	Sox2_MA0143.3	-6	0	-	0	0	.
chr22	48101836	48101837	chr22:48101837:A:G	rs6007800	A	G	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr22	48114378	48114379	chr22:48114379:T:C	rs16998380	T	C	C	Sox2_MA0143.3	13	0	+	0	0	.
chr22	48125616	48125617	chr22:48125617:G:A	rs117068343	G	A	g	Sox2_MA0143.3	27	0	-	0	0	.
chr22	48195204	48195205	chr22:48195205:A:T	rs133529	A	T	T	Sox2_MA0143.3	16	0	+	0	0	.
chr22	48209551	48209552	chr22:48209552:T:C	rs9615795	T	C	T	Sox2_MA0143.3	22	0	-	0	0	.
chr22	48253636	48253637	chr22:48253637:T:G	rs125954	T	G	G	Sox2_MA0143.3	22	0	-	0	0	.
chr22	48256184	48256185	chr22:48256185:T:G	rs1004689	T	G	T	Sox2_MA0143.3	9	0	-	0	0	.
chr22	48272350	48272351	chr22:48272351:G:A	rs133591	G	A	g	Sox2_MA0143.3	-13	0	+	0	0	.
chr22	48298985	48298986	chr22:48298986:G:T	rs117744013	G	T	G	Sox2_MA0143.3	24	0	-	0	0	.
chr22	48300884	48300885	chr22:48300885:A:C	rs926235	A	C	A	Sox2_MA0143.3	-6	0	+	0	0	.
chr22	48310703	48310704	chr22:48310704:G:A	rs133629	G	A	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr22	48333857	48333858	chr22:48333858:G:A	rs34134485	G	A	G	Sox2_MA0143.3	-16	0	-	0	0	.
chr22	48351662	48351663	chr22:48351663:C:A	chr22:48351663:C:A	C	A	C	Sox2_MA0143.3	-20	0	-	0	0	.
chr22	48486792	48486793	chr22:48486793:C:T	rs5768672	C	T	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr22	48499961	48499962	chr22:48499962:C:T	rs16999282	C	T	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr22	48517935	48517936	chr22:48517936:C:T	rs758814193	C	T	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr22	48536355	48536356	chr22:48536356:C:G	rs62223632	C	G	C	Sox2_MA0143.3	7	1	+	9.206767037375712	8.864090315184848	CCTTTGTC
chr22	48600802	48600803	chr22:48600803:C:G	rs28606415	C	G	C	Sox2_MA0143.3	17	0	+	0	0	.
chr22	48604096	48604097	chr22:48604097:A:G	rs28719105	A	G	G	Sox2_MA0143.3	-14	0	+	0	0	.
chr22	48608773	48608774	chr22:48608774:T:C	rs28633774	T	C	T	Sox2_MA0143.3	4	1	+	9.206767037375712	2.2980122580604916	CCTTTGTC
chr22	48630479	48630480	chr22:48630480:G:A	rs11705206	G	A	G	Sox2_MA0143.3	22	0	+	0	0	.
chr22	48669211	48669212	chr22:48669212:C:T	rs9617418	C	T	C	Sox2_MA0143.3	14	0	+	0	0	.
chr22	48701497	48701498	chr22:48701498:A:G	rs132226	A	G	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr22	48701498	48701499	chr22:48701499:A:C	rs132227	A	C	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr22	48702964	48702965	chr22:48702965:G:A	rs567079429	G	A	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr22	48710971	48710972	chr22:48710972:A:G	rs132243	A	G	A	Sox2_MA0143.3	-3	0	-	0	0	.
chr22	48720681	48720682	chr22:48720682:A:G	rs6010603	A	G	A	Sox2_MA0143.3	25	0	-	0	0	.
chr22	48723082	48723083	chr22:48723083:A:C	rs132255	A	C	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr22	48756868	48756869	chr22:48756869:T:C	rs59193375	T	C	T	Sox2_MA0143.3	19	0	-	0	0	.
chr22	48789248	48789249	chr22:48789249:A:G	rs2157303	A	G	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr22	48827483	48827484	chr22:48827484:T:C	rs6587316	T	C	C	Sox2_MA0143.3	9	0	-	0	0	.
chr22	48827496	48827497	chr22:48827497:G:A	rs7284388	G	A	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr22	48838176	48838177	chr22:48838177:T:G	rs28394478	T	G	T	Sox2_MA0143.3	4	1	+	8.676919043985553	1.7681642646703322	CCATTGTG
chr22	48929713	48929714	chr22:48929714:C:T	rs17000064	C	T	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr22	48930902	48930903	chr22:48930903:G:T	rs73431814	G	T	G	Sox2_MA0143.3	12	0	+	0	0	.
chr22	48939252	48939253	chr22:48939253:C:T	rs76018071	C	T	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr22	48958243	48958244	chr22:48958244:T:G	rs5770497	T	G	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr22	48968432	48968433	chr22:48968433:A:G	rs13054888	A	G	a	Sox2_MA0143.3	-4	0	-	0	0	.
chr22	48974986	48974987	chr22:48974987:C:T	rs181875346	C	T	c	Sox2_MA0143.3	19	0	-	0	0	.
chr22	48975021	48975022	chr22:48975022:C:G	rs9628100	C	G	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr22	48984897	48984898	chr22:48984898:G:A	rs9616350	G	A	G	Sox2_MA0143.3	23	0	+	0	0	.
chr22	49010548	49010549	chr22:49010549:G:C	rs9616220	G	C	G	Sox2_MA0143.3	22	0	-	0	0	.
chr22	49071847	49071848	chr22:49071848:A:T	rs5769867	A	T	A	Sox2_MA0143.3	-1	0	+	0	0	.
chr22	49076208	49076209	chr22:49076209:A:C	rs7289623	A	C	A	Sox2_MA0143.3	-4	0	-	0	0	.
chr22	49076214	49076215	chr22:49076215:A:C	rs13054283	A	C	A	Sox2_MA0143.3	-10	0	-	0	0	.
chr22	49076221	49076222	chr22:49076222:C:G	rs5769394	C	G	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr22	49161714	49161715	chr22:49161715:G:A	rs71316518	G	A	G	Sox2_MA0143.3	-11	0	+	0	0	.
chr22	49163672	49163673	chr22:49163673:C:A	rs9647315	C	A	C	Sox2_MA0143.3	17	0	-	0	0	.
chr22	49229143	49229144	chr22:49229144:T:C	rs6009556	T	C	t	Sox2_MA0143.3	-11	0	-	0	0	.
chr22	49255850	49255851	chr22:49255851:C:T	rs2858641	C	T	c	Sox2_MA0143.3	24	0	-	0	0	.
chr22	49348975	49348976	chr22:49348976:C:T	rs554095738	C	T	c	Sox2_MA0143.3	-15	0	-	0	0	.
chr22	49396566	49396567	chr22:49396567:T:C	rs5769625	T	C	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr22	49404344	49404345	chr22:49404345:G:A	rs900138224	G	A	G	Sox2_MA0143.3	23	0	-	0	0	.
chr22	49404361	49404362	chr22:49404362:A:G	rs4823934	A	G	G	Sox2_MA0143.3	6	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr22	49413797	49413798	chr22:49413798:T:A	rs6009241	T	A	A	Sox2_MA0143.3	8	0	+	0	0	.
chr22	49432268	49432269	chr22:49432269:A:G	rs6009251	A	G	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr22	49538741	49538742	chr22:49538742:A:G	rs135767	A	G	G	Sox2_MA0143.3	-3	0	-	0	0	.
chr22	49619453	49619454	chr22:49619454:G:A	chr22:49619454:G:A	G	A	G	Sox2_MA0143.3	1	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr22	49624396	49624397	chr22:49624397:G:A	rs763128	G	A	G	Sox2_MA0143.3	-11	0	+	0	0	.
chr22	49624420	49624421	chr22:49624421:A:G	rs2011097	A	G	G	Sox2_MA0143.3	13	0	+	0	0	.
chr22	49628108	49628109	chr22:49628109:C:T	rs5769709	C	T	C	Sox2_MA0143.3	26	0	-	0	0	.
chr22	49628324	49628325	chr22:49628325:G:A	rs11705461	G	A	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr22	49628565	49628566	chr22:49628566:C:G	rs6009789	C	G	C	Sox2_MA0143.3	5	1	-	9.019595766176417	2.110840986861197	CCATTGTC
chr22	49661505	49661506	chr22:49661506:T:C	rs35011366	T	C	t	Sox2_MA0143.3	-6	0	-	0	0	.
chr22	49688898	49688899	chr22:49688899:C:T	rs73179158	C	T	C	Sox2_MA0143.3	17	0	-	0	0	.
chr22	49734781	49734782	chr22:49734782:C:T	rs139800	C	T	T	Sox2_MA0143.3	-7	0	-	0	0	.
chr22	49758580	49758581	chr22:49758581:T:C	rs139836	T	C	T	Sox2_MA0143.3	-19	0	-	0	0	.
chr22	49817646	49817647	chr22:49817647:G:A	rs138872	G	A	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr22	49849037	49849038	chr22:49849038:G:A	rs12106611	G	A	G	Sox2_MA0143.3	11	0	-	0	0	.
chr22	49849059	49849060	chr22:49849060:G:A	rs537798957	G	A	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr22	49867255	49867256	chr22:49867256:G:A	rs2295407	G	A	G	Sox2_MA0143.3	15	0	+	0	0	.
chr22	49880644	49880645	chr22:49880645:A:G	rs73443906	A	G	A	Sox2_MA0143.3	17	0	+	0	0	.
chr22	49933767	49933768	chr22:49933768:G:T	rs79206784	G	T	G	Sox2_MA0143.3	12	0	+	0	0	.
chr22	49933774	49933775	chr22:49933775:A:G	rs113582292	A	G	A	Sox2_MA0143.3	19	0	+	0	0	.
chr22	50026066	50026067	chr22:50026067:G:A	rs137888	G	A	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr22	50119976	50119977	chr22:50119977:C:T	rs715619	C	T	T	Sox2_MA0143.3	16	0	+	0	0	.
chr22	50216458	50216459	chr22:50216459:G:C	rs2038049	G	C	G	Sox2_MA0143.3	26	0	-	0	0	.
chr22	50271826	50271827	chr22:50271827:G:A	rs576671698	G	A	G	Sox2_MA0143.3	14	0	+	0	0	.
chr22	50307620	50307621	chr22:50307621:C:G	rs958604976	C	G	-	Sox2_MA0143.3	-17	0	+	0	0	.
chr22	50326424	50326425	chr22:50326425:C:A	rs140933791	C	A	C	Sox2_MA0143.3	25	0	+	0	0	.
chr22	50400272	50400273	chr22:50400273:T:C	rs9616944	T	C	c	Sox2_MA0143.3	3	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr22	50463104	50463105	chr22:50463105:A:G	rs5771039	A	G	G	Sox2_MA0143.3	20	0	-	0	0	.
chr22	50532566	50532567	chr22:50532567:C:T	rs74795169	C	T	C	Sox2_MA0143.3	10	0	+	0	0	.
chr22	50578923	50578924	chr22:50578924:T:C	rs5770917	T	C	T	Sox2_MA0143.3	22	0	+	0	0	.
chr22	50602465	50602466	chr22:50602466:G:A	rs73445578	G	A	G	Sox2_MA0143.3	26	0	-	0	0	.
chr22	50724960	50724961	chr22:50724961:G:A	rs182459402	G	A	G	Sox2_MA0143.3	23	0	+	0	0	.
chr22	50729606	50729607	chr22:50729607:G:A	rs563134354	G	A	G	Sox2_MA0143.3	26	0	+	0	0	.
chr22	50739661	50739662	chr22:50739662:G:A	rs2285395	G	A	a	Sox2_MA0143.3	-17	0	+	0	0	.
chr22	50775330	50775331	chr22:50775331:G:C	rs141103268	G	C	g	Sox2_MA0143.3	-10	0	-	0	0	.
chr3	73211	73212	chr3:73212:C:G	rs12631152	C	G	C	Sox2_MA0143.3	14	0	+	0	0	.
chr3	99433	99434	chr3:99434:G:C	rs7628020	G	C	G	Sox2_MA0143.3	21	0	-	0	0	.
chr3	111260	111261	chr3:111261:C:G	rs181703511	C	G	C	Sox2_MA0143.3	5	1	-	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr3	129284	129285	chr3:129285:T:G	rs1400180	T	G	T	Sox2_MA0143.3	4	1	+	3.5547341015215945	-3.3540206777936254	CCTTTGTA
chr3	354543	354544	chr3:354544:G:T	rs961631816	G	T	G	Sox2_MA0143.3	14	0	+	0	0	.
chr3	375259	375260	chr3:375260:G:A	rs3773383	G	A	G	Sox2_MA0143.3	1	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr3	514345	514346	chr3:514346:A:G	rs116362054	A	G	A	Sox2_MA0143.3	-15	0	-	0	0	.
chr3	546894	546895	chr3:546895:G:C	rs6764684	G	C	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr3	618122	618123	chr3:618123:A:G	rs149448530	A	G	A	Sox2_MA0143.3	6	1	-	9.613475778572903	2.7047209992576837	CCATTGTT
chr3	707258	707259	chr3:707259:C:T	rs2729183	C	T	C	Sox2_MA0143.3	26	0	-	0	0	.
chr3	1030119	1030120	chr3:1030120:T:C	rs9843255	T	C	T	Sox2_MA0143.3	27	0	+	0	0	.
chr3	1124224	1124225	chr3:1124225:G:C	rs55692314	G	C	C	Sox2_MA0143.3	5	1	+	9.206767037375712	2.298012258060492	CCTTTGTC
chr3	1272343	1272344	chr3:1272344:C:G	rs17036955	C	G	C	Sox2_MA0143.3	27	0	-	0	0	.
chr3	1280386	1280387	chr3:1280387:T:A	rs3821434	T	A	T	Sox2_MA0143.3	-15	0	+	0	0	.
chr3	1294833	1294834	chr3:1294834:T:C	rs11717482	T	C	T	Sox2_MA0143.3	19	0	+	0	0	.
chr3	1515348	1515349	chr3:1515349:A:C	rs9837455	A	C	C	Sox2_MA0143.3	16	0	+	0	0	.
chr3	1531464	1531465	chr3:1531465:C:G	rs73001650	C	G	G	Sox2_MA0143.3	5	1	-	9.019595766176417	2.110840986861197	CCATTGTC
chr3	1534204	1534205	chr3:1534205:T:G	rs1969290	T	G	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr3	1600193	1600194	chr3:1600194:G:T	rs9872668	G	T	T	Sox2_MA0143.3	18	0	+	0	0	.
chr3	1618174	1618175	chr3:1618175:G:C	rs1976025	G	C	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr3	1963009	1963010	chr3:1963010:T:A	rs115864661	T	A	T	Sox2_MA0143.3	-3	0	+	0	0	.
chr3	2106708	2106709	chr3:2106709:G:A	rs2729003	G	A	A	Sox2_MA0143.3	-7	0	+	0	0	.
chr3	2180866	2180867	chr3:2180867:T:C	rs35395656	T	C	C	Sox2_MA0143.3	20	0	+	0	0	.
chr3	2188827	2188828	chr3:2188828:A:G	rs76804888	A	G	A	Sox2_MA0143.3	3	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr3	2269190	2269191	chr3:2269191:G:C	rs11129074	G	C	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr3	2386313	2386314	chr3:2386314:A:G	rs66906407	A	G	G	Sox2_MA0143.3	18	0	+	0	0	.
chr3	2685786	2685787	chr3:2685787:C:A	rs6807274	C	A	A	Sox2_MA0143.3	24	0	+	0	0	.
chr3	2706342	2706343	chr3:2706343:T:C	rs2675300	T	C	T	Sox2_MA0143.3	24	0	+	0	0	.
chr3	2877059	2877060	chr3:2877060:T:C	rs7651306	T	C	c	Sox2_MA0143.3	6	1	+	9.613475778572903	2.7047209992576837	CCATTGTT
chr3	3038561	3038562	chr3:3038562:A:T	rs77680079	A	T	A	Sox2_MA0143.3	-7	0	+	0	0	.
chr3	3038824	3038825	chr3:3038825:C:T	rs7648232	C	T	T	Sox2_MA0143.3	-3	0	-	0	0	.
chr3	3392577	3392578	chr3:3392578:C:G	rs1396432	C	G	G	Sox2_MA0143.3	5	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr3	3799078	3799079	chr3:3799079:G:A	rs972815695	G	A	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr3	3799080	3799081	chr3:3799081:A:C	rs11705993	A	C	A	Sox2_MA0143.3	-14	0	+	0	0	.
chr3	3833751	3833752	chr3:3833752:G:A	rs6802168	G	A	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr3	3907037	3907038	chr3:3907038:A:G	rs9850979	A	G	G	Sox2_MA0143.3	9	0	-	0	0	.
chr3	4069114	4069115	chr3:4069115:G:A	rs711676	G	A	G	Sox2_MA0143.3	10	0	+	0	0	.
chr3	4097976	4097977	chr3:4097977:C:G	rs73129164	C	G	G	Sox2_MA0143.3	13	0	-	0	0	.
chr3	4224585	4224586	chr3:4224586:G:C	rs13089862	G	C	C	Sox2_MA0143.3	27	0	-	0	0	.
chr3	4224612	4224613	chr3:4224613:G:T	rs313688	G	T	G	Sox2_MA0143.3	0	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr3	4340972	4340973	chr3:4340973:T:C	rs62259857	T	C	T	Sox2_MA0143.3	-20	0	+	0	0	.
chr3	4340990	4340991	chr3:4340991:A:T	rs9847079	A	T	A	Sox2_MA0143.3	-2	0	+	0	0	.
chr3	4341012	4341013	chr3:4341013:C:T	rs73016213	C	T	c	Sox2_MA0143.3	20	0	+	0	0	.
chr3	4356186	4356187	chr3:4356187:T:C	rs373253240	T	C	T	Sox2_MA0143.3	-15	0	-	0	0	.
chr3	4395612	4395613	chr3:4395613:C:T	rs794186	C	T	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr3	4448828	4448829	chr3:4448829:G:A	rs711635	G	A	A	Sox2_MA0143.3	-14	0	-	0	0	.
chr3	4475003	4475004	chr3:4475004:A:C	rs899112234	A	C	A	Sox2_MA0143.3	13	0	-	0	0	.
chr3	4476691	4476692	chr3:4476692:A:G	chr3:4476692:A:G	A	G	A	Sox2_MA0143.3	6	1	-	9.613475778572903	2.7047209992576837	CCATTGTT
chr3	4531429	4531430	chr3:4531430:G:C	rs75684840	G	C	G	Sox2_MA0143.3	18	0	+	0	0	.
chr3	4534339	4534340	chr3:4534340:T:A	rs76336723	T	A	T	Sox2_MA0143.3	20	0	+	0	0	.
chr3	4546615	4546616	chr3:4546616:C:T	rs13068939	C	T	C	Sox2_MA0143.3	0	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr3	4552460	4552461	chr3:4552461:A:C	rs11720179	A	C	A	Sox2_MA0143.3	11	0	-	0	0	.
chr3	4553197	4553198	chr3:4553198:G:A	rs11130059	G	A	G	Sox2_MA0143.3	11	0	-	0	0	.
chr3	4571089	4571090	chr3:4571090:A:C	rs75321780	A	C	A	Sox2_MA0143.3	-3	0	+	0	0	.
chr3	4721771	4721772	chr3:4721772:A:C	rs9311399	A	C	C	Sox2_MA0143.3	26	0	-	0	0	.
chr3	4744743	4744744	chr3:4744744:T:A	rs4684441	T	A	T	Sox2_MA0143.3	20	0	+	0	0	.
chr3	4865838	4865839	chr3:4865839:A:G	rs2099836	A	G	A	Sox2_MA0143.3	13	0	-	0	0	.
chr3	4885623	4885624	chr3:4885624:A:G	rs6794077	A	G	G	Sox2_MA0143.3	14	0	-	0	0	.
chr3	4990263	4990264	chr3:4990264:A:G	rs73106081	A	G	A	Sox2_MA0143.3	-10	0	-	0	0	.
chr3	5014818	5014819	chr3:5014819:G:A	rs78298270	G	A	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr3	5021957	5021958	chr3:5021958:C:A	rs940923915	C	A	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr3	5079915	5079916	chr3:5079916:T:C	rs73095961	T	C	T	Sox2_MA0143.3	10	0	+	0	0	.
chr3	5083083	5083084	chr3:5083084:C:T	rs7637629	C	T	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr3	5098678	5098679	chr3:5098679:C:T	rs2671758	C	T	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr3	5105358	5105359	chr3:5105359:T:C	rs2600100	T	C	C	Sox2_MA0143.3	20	0	-	0	0	.
chr3	5123083	5123084	chr3:5123084:A:G	rs6772815	A	G	G	Sox2_MA0143.3	27	0	+	0	0	.
chr3	5333350	5333351	chr3:5333351:A:G	rs7616898	A	G	G	Sox2_MA0143.3	3	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr3	5439046	5439047	chr3:5439047:G:C	rs17746680	G	C	G	Sox2_MA0143.3	5	1	+	9.206767037375712	2.298012258060492	CCTTTGTC
chr3	5555357	5555358	chr3:5555358:C:G	rs2323236	C	G	G	Sox2_MA0143.3	19	0	+	0	0	.
chr3	5613375	5613376	chr3:5613376:A:G	rs17818811	A	G	A	Sox2_MA0143.3	-4	0	+	0	0	.
chr3	5650491	5650492	chr3:5650492:C:G	rs12715489	C	G	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr3	5720680	5720681	chr3:5720681:C:G	rs78942055	C	G	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr3	5720696	5720697	chr3:5720697:C:T	rs148829206	C	T	C	Sox2_MA0143.3	0	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr3	5735534	5735535	chr3:5735535:C:T	rs1452713	C	T	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr3	5785103	5785104	chr3:5785104:A:G	rs11710225	A	G	A	Sox2_MA0143.3	13	0	-	0	0	.
chr3	5846816	5846817	chr3:5846817:T:C	rs76342709	T	C	C	Sox2_MA0143.3	9	0	-	0	0	.
chr3	5846833	5846834	chr3:5846834:G:A	rs1159474	G	A	A	Sox2_MA0143.3	-8	0	-	0	0	.
chr3	5891007	5891008	chr3:5891008:C:G	rs892823	C	G	C	Sox2_MA0143.3	1	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr3	5988022	5988023	chr3:5988023:C:T	rs4686011	C	T	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr3	5999872	5999873	chr3:5999873:A:G	rs28489958	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr3	6009997	6009998	chr3:6009998:T:G	rs57763348	T	G	T	Sox2_MA0143.3	16	0	+	0	0	.
chr3	6051495	6051496	chr3:6051496:T:G	rs6443019	T	G	T	Sox2_MA0143.3	-9	0	-	0	0	.
chr3	6080613	6080614	chr3:6080614:A:G	rs1156715284	A	G	A	Sox2_MA0143.3	14	0	+	0	0	.
chr3	6455418	6455419	chr3:6455419:A:G	rs7618839	A	G	G	Sox2_MA0143.3	6	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr3	6680737	6680738	chr3:6680738:C:G	rs17045703	C	G	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr3	6866847	6866848	chr3:6866848:G:A	rs342026	G	A	A	Sox2_MA0143.3	11	0	+	0	0	.
chr3	7058738	7058739	chr3:7058739:A:C	rs2221115	A	C	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr3	7447588	7447589	chr3:7447589:A:G	rs6777966	A	G	A	Sox2_MA0143.3	19	0	+	0	0	.
chr3	7519938	7519939	chr3:7519939:C:A	rs140102642	C	A	C	Sox2_MA0143.3	0	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr3	7519946	7519947	chr3:7519947:T:G	chr3:7519947:T:G	T	G	T	Sox2_MA0143.3	8	0	+	0	0	.
chr3	7519958	7519959	chr3:7519959:G:A	rs115861218	G	A	G	Sox2_MA0143.3	20	0	+	0	0	.
chr3	7712599	7712600	chr3:7712600:G:T	rs1036574	G	T	G	Sox2_MA0143.3	5	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr3	7734730	7734731	chr3:7734731:A:G	rs1847434	A	G	G	Sox2_MA0143.3	20	0	+	0	0	.
chr3	7865835	7865836	chr3:7865836:A:G	rs1386986	A	G	A	Sox2_MA0143.3	-10	0	-	0	0	.
chr3	7872560	7872561	chr3:7872561:G:A	rs2054885	G	A	G	Sox2_MA0143.3	25	0	-	0	0	.
chr3	7897606	7897607	chr3:7897607:A:C	rs3914959	A	C	C	Sox2_MA0143.3	4	1	-	8.676919043985553	1.7681642646703322	CCATTGTG
chr3	7897607	7897608	chr3:7897608:A:C	rs3914960	A	C	C	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr3	8139010	8139011	chr3:8139011:C:T	rs377092	C	T	C	Sox2_MA0143.3	16	0	-	0	0	.
chr3	8139085	8139086	chr3:8139086:C:T	rs394471	C	T	T	Sox2_MA0143.3	18	0	-	0	0	.
chr3	8173902	8173903	chr3:8173903:T:G	rs113701736	T	G	T	Sox2_MA0143.3	-17	0	+	0	0	.
chr3	8173911	8173912	chr3:8173912:T:C	rs56372709	T	C	T	Sox2_MA0143.3	-8	0	+	0	0	.
chr3	8273826	8273827	chr3:8273827:A:G	rs1873074	A	G	A	Sox2_MA0143.3	-2	0	-	0	0	.
chr3	8286199	8286200	chr3:8286200:A:G	rs11709567	A	G	A	Sox2_MA0143.3	23	0	+	0	0	.
chr3	8338030	8338031	chr3:8338031:G:A	rs4684591	G	A	T	Sox2_MA0143.3	7	1	-	9.206767037375712	9.800647049772198	CCTTTGTC
chr3	8456728	8456729	chr3:8456729:G:A	rs111389357	G	A	G	Sox2_MA0143.3	18	0	+	0	0	.
chr3	8503791	8503792	chr3:8503792:C:A	rs17049214	C	A	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr3	8507198	8507199	chr3:8507199:T:C	rs931686	T	C	C	Sox2_MA0143.3	11	0	+	0	0	.
chr3	8519965	8519966	chr3:8519966:T:A	rs73130034	T	A	A	Sox2_MA0143.3	12	0	+	0	0	.
chr3	8540736	8540737	chr3:8540737:G:A	rs13323913	G	A	A	Sox2_MA0143.3	-2	0	-	0	0	.
chr3	8571592	8571593	chr3:8571593:C:G	rs1667464	C	G	G	Sox2_MA0143.3	-16	0	-	0	0	.
chr3	8573764	8573765	chr3:8573765:A:G	rs73024306	A	G	A	Sox2_MA0143.3	19	0	+	0	0	.
chr3	8578375	8578376	chr3:8578376:A:G	rs7635151	A	G	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr3	8597463	8597464	chr3:8597464:C:A	rs415926	C	A	C	Sox2_MA0143.3	23	0	-	0	0	.
chr3	8597465	8597466	chr3:8597466:G:A	rs415925	G	A	A	Sox2_MA0143.3	21	0	-	0	0	.
chr3	8611482	8611483	chr3:8611483:A:G	rs9312026	A	G	A	Sox2_MA0143.3	2	1	+	9.613475778572903	3.494828071296623	CCATTGTT
chr3	8619550	8619551	chr3:8619551:T:A	rs184859525	T	A	T	Sox2_MA0143.3	-13	0	-	0	0	.
chr3	8648534	8648535	chr3:8648535:G:A	rs926147	G	A	A	Sox2_MA0143.3	14	0	+	0	0	.
chr3	8661592	8661593	chr3:8661593:C:T	rs12638942	C	T	C	Sox2_MA0143.3	10	0	-	0	0	.
chr3	8679974	8679975	chr3:8679975:C:A	rs151325028	C	A	-	Sox2_MA0143.3	-18	0	-	0	0	.
chr3	8764053	8764054	chr3:8764054:T:C	rs7652281	T	C	T	Sox2_MA0143.3	-11	0	-	0	0	.
chr3	9009278	9009279	chr3:9009279:T:A	rs932145	T	A	A	Sox2_MA0143.3	27	0	-	0	0	.
chr3	9056738	9056739	chr3:9056739:G:A	rs2664098	G	A	A	Sox2_MA0143.3	-6	0	+	0	0	.
chr3	9102603	9102604	chr3:9102604:C:T	rs73017408	C	T	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr3	9102693	9102694	chr3:9102694:A:T	rs115852038	A	T	A	Sox2_MA0143.3	18	0	+	0	0	.
chr3	9122011	9122012	chr3:9122012:A:G	rs6443224	A	G	G	Sox2_MA0143.3	4	1	-	9.206767037375712	2.2980122580604916	CCTTTGTC
chr3	9122021	9122022	chr3:9122022:T:G	rs6443225	T	G	T	Sox2_MA0143.3	-6	0	-	0	0	.
chr3	9142361	9142362	chr3:9142362:A:G	rs191931551	A	G	A	Sox2_MA0143.3	-19	0	+	0	0	.
chr3	9168537	9168538	chr3:9168538:C:T	rs116721676	C	T	C	Sox2_MA0143.3	20	0	+	0	0	.
chr3	9169475	9169476	chr3:9169476:A:G	rs1186287	A	G	A	Sox2_MA0143.3	16	0	-	0	0	.
chr3	9169682	9169683	chr3:9169683:A:G	rs986120	A	G	G	Sox2_MA0143.3	20	0	-	0	0	.
chr3	9193650	9193651	chr3:9193651:G:C	rs71314330	G	C	G	Sox2_MA0143.3	9	0	-	0	0	.
chr3	9308482	9308483	chr3:9308483:C:A	rs17050220	C	A	A	Sox2_MA0143.3	23	0	-	0	0	.
chr3	9316931	9316932	chr3:9316932:G:T	rs3852050	G	T	G	Sox2_MA0143.3	8	0	-	0	0	.
chr3	9333462	9333463	chr3:9333463:C:T	rs2600169	C	T	C	Sox2_MA0143.3	17	0	+	0	0	.
chr3	9353700	9353701	chr3:9353701:C:T	rs2596924	C	T	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr3	9369660	9369661	chr3:9369661:A:G	rs9862626	A	G	A	Sox2_MA0143.3	18	0	+	0	0	.
chr3	9676950	9676951	chr3:9676951:C:T	rs1460801331	C	T	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr3	9676951	9676952	chr3:9676952:G:A	rs75938917	G	A	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr3	9677018	9677019	chr3:9677019:A:G	rs77905579	A	G	A	Sox2_MA0143.3	-9	0	-	0	0	.
chr3	9792853	9792854	chr3:9792854:G:A	rs41278549	G	A	G	Sox2_MA0143.3	15	0	-	0	0	.
chr3	9793519	9793520	chr3:9793520:C:A	rs1345381594	C	A	C	Sox2_MA0143.3	7	1	+	9.206767037375712	3.5547341015215945	CCTTTGTC
chr3	9815829	9815830	chr3:9815830:A:G	rs7652460	A	G	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr3	9851653	9851654	chr3:9851654:C:T	rs73116195	C	T	c	Sox2_MA0143.3	25	0	-	0	0	.
chr3	9875969	9875970	chr3:9875970:G:A	rs462378	G	A	A	Sox2_MA0143.3	21	0	-	0	0	.
chr3	9890742	9890743	chr3:9890743:G:C	rs138937423	G	C	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr3	9898143	9898144	chr3:9898144:G:A	rs12053867	G	A	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr3	9927643	9927644	chr3:9927644:A:G	rs7627880	A	G	A	Sox2_MA0143.3	-14	0	-	0	0	.
chr3	10104523	10104524	chr3:10104524:T:A	rs185053200	T	A	T	Sox2_MA0143.3	6	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr3	10116160	10116161	chr3:10116161:C:T	rs73117474	C	T	C	Sox2_MA0143.3	22	0	+	0	0	.
chr3	10136175	10136176	chr3:10136176:C:G	rs112594161	C	G	C	Sox2_MA0143.3	-5	0	-	0	0	.
chr3	10154657	10154658	chr3:10154658:A:G	rs908203966	A	G	A	Sox2_MA0143.3	-11	0	+	0	0	.
chr3	10245432	10245433	chr3:10245433:G:A	rs242723	G	A	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr3	10300151	10300152	chr3:10300152:T:C	rs40608	T	C	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr3	10312745	10312746	chr3:10312746:T:G	rs200402471	T	G	T	Sox2_MA0143.3	-7	0	-	0	0	.
chr3	10322578	10322579	chr3:10322579:A:C	rs9861455	A	C	a	Sox2_MA0143.3	-9	0	-	0	0	.
chr3	10344687	10344688	chr3:10344688:C:T	rs373685799	C	T	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr3	10377450	10377451	chr3:10377451:A:C	rs540772030	A	C	A	Sox2_MA0143.3	12	0	-	0	0	.
chr3	10387265	10387266	chr3:10387266:C:T	rs145175642	C	T	C	Sox2_MA0143.3	20	0	+	0	0	.
chr3	10420142	10420143	chr3:10420143:G:A	rs954386447	G	A	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr3	10432763	10432764	chr3:10432764:C:T	rs34854	C	T	T	Sox2_MA0143.3	12	0	-	0	0	.
chr3	10468602	10468603	chr3:10468603:A:G	rs17032939	A	G	A	Sox2_MA0143.3	17	0	+	0	0	.
chr3	10483411	10483412	chr3:10483412:A:G	rs735931	A	G	G	Sox2_MA0143.3	12	0	-	0	0	.
chr3	10499125	10499126	chr3:10499126:A:T	rs7644121	A	T	A	Sox2_MA0143.3	4	1	-	8.864090315184848	1.9553355358696274	CCTTTGTG
chr3	10517101	10517102	chr3:10517102:T:C	rs74501630	T	C	T	Sox2_MA0143.3	-18	0	-	0	0	.
chr3	10549822	10549823	chr3:10549823:G:C	rs11720603	G	C	C	Sox2_MA0143.3	27	0	-	0	0	.
chr3	10553407	10553408	chr3:10553408:T:C	rs1009398193	T	C	T	Sox2_MA0143.3	18	0	-	0	0	.
chr3	10553870	10553871	chr3:10553871:T:C	rs570601663	T	C	T	Sox2_MA0143.3	3	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr3	10553879	10553880	chr3:10553880:A:G	rs750422	A	G	A	Sox2_MA0143.3	12	0	+	0	0	.
chr3	10570654	10570655	chr3:10570655:C:T	rs34017583	C	T	T	Sox2_MA0143.3	-6	0	-	0	0	.
chr3	10618082	10618083	chr3:10618083:C:T	rs930273	C	T	T	Sox2_MA0143.3	-20	0	+	0	0	.
chr3	10618125	10618126	chr3:10618126:G:A	rs2013114	G	A	G	Sox2_MA0143.3	23	0	+	0	0	.
chr3	10620510	10620511	chr3:10620511:G:A	rs77305647	G	A	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr3	10632622	10632623	chr3:10632623:C:T	rs1560921	C	T	T	Sox2_MA0143.3	23	0	-	0	0	.
chr3	10647939	10647940	chr3:10647940:C:A	rs7355964	C	A	C	Sox2_MA0143.3	-5	0	-	0	0	.
chr3	10648373	10648374	chr3:10648374:C:A	rs67933777	C	A	A	Sox2_MA0143.3	-1	0	+	0	0	.
chr3	10697153	10697154	chr3:10697154:T:C	rs2571211	T	C	T	Sox2_MA0143.3	4	1	+	8.676919043985553	1.7681642646703322	CCATTGTG
chr3	10738017	10738018	chr3:10738018:G:C	rs350661	G	C	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr3	10739629	10739630	chr3:10739630:G:A	rs4630924	G	A	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr3	10776235	10776236	chr3:10776236:T:A	rs77840613	T	A	T	Sox2_MA0143.3	-11	0	+	0	0	.
chr3	10776240	10776241	chr3:10776241:C:T	rs9808955	C	T	T	Sox2_MA0143.3	-6	0	+	0	0	.
chr3	10783456	10783457	chr3:10783457:C:T	rs971196	C	T	C	Sox2_MA0143.3	25	0	+	0	0	.
chr3	10901386	10901387	chr3:10901387:C:T	rs73037928	C	T	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr3	10916057	10916058	chr3:10916058:G:A	rs3774086	G	A	G	Sox2_MA0143.3	19	0	-	0	0	.
chr3	10927779	10927780	chr3:10927780:C:T	rs13319764	C	T	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr3	10934558	10934559	chr3:10934559:C:T	rs7648448	C	T	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr3	10934569	10934570	chr3:10934570:G:A	rs3774074	G	A	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr3	10977714	10977715	chr3:10977715:A:C	rs56362190	A	C	A	Sox2_MA0143.3	-5	0	+	0	0	.
chr3	11127458	11127459	chr3:11127459:T:C	rs4684759	T	C	T	Sox2_MA0143.3	-8	0	+	0	0	.
chr3	11174876	11174877	chr3:11174877:T:A	rs60240806	T	A	T	Sox2_MA0143.3	21	0	+	0	0	.
chr3	11367327	11367328	chr3:11367328:T:C	rs140325730	T	C	T	Sox2_MA0143.3	-1	0	+	0	0	.
chr3	11371279	11371280	chr3:11371280:A:G	rs9653970	A	G	A	Sox2_MA0143.3	17	0	-	0	0	.
chr3	11446070	11446071	chr3:11446071:C:A	rs140134677	C	A	C	Sox2_MA0143.3	8	0	+	0	0	.
chr3	11470489	11470490	chr3:11470490:C:T	rs142326077	C	T	C	Sox2_MA0143.3	1	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr3	11470500	11470501	chr3:11470501:G:A	rs6773963	G	A	G	Sox2_MA0143.3	12	0	+	0	0	.
chr3	11547298	11547299	chr3:11547299:C:T	rs2443701	C	T	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr3	11588777	11588778	chr3:11588778:G:T	rs12633841	G	T	G	Sox2_MA0143.3	8	0	-	0	0	.
chr3	11591411	11591412	chr3:11591412:C:A	rs535380771	C	A	C	Sox2_MA0143.3	27	0	+	0	0	.
chr3	11591574	11591575	chr3:11591575:C:T	rs565138119	C	T	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr3	11592504	11592505	chr3:11592505:C:T	rs17034742	C	T	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr3	11608089	11608090	chr3:11608090:C:A	rs73814923	C	A	C	Sox2_MA0143.3	15	0	-	0	0	.
chr3	11614365	11614366	chr3:11614366:C:T	rs61521214	C	T	C	Sox2_MA0143.3	14	0	+	0	0	.
chr3	11614372	11614373	chr3:11614373:C:T	rs57564733	C	T	C	Sox2_MA0143.3	21	0	+	0	0	.
chr3	11635952	11635953	chr3:11635953:A:T	rs11128561	A	T	A	Sox2_MA0143.3	8	0	-	0	0	.
chr3	11651803	11651804	chr3:11651804:T:A	rs17034981	T	A	T	Sox2_MA0143.3	4	1	+	9.800647049772198	2.8918922704569785	CCTTTGTT
chr3	11661307	11661308	chr3:11661308:A:G	rs17035032	A	G	G	Sox2_MA0143.3	25	0	-	0	0	.
chr3	11670286	11670287	chr3:11670287:C:T	rs10510405	C	T	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr3	11717879	11717880	chr3:11717880:A:C	rs6790369	A	C	A	Sox2_MA0143.3	3	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr3	11717893	11717894	chr3:11717894:A:G	rs1979799	A	G	A	Sox2_MA0143.3	-11	0	-	0	0	.
chr3	11755725	11755726	chr3:11755726:C:G	rs76949482	C	G	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr3	11799428	11799429	chr3:11799429:A:G	rs1846206	A	G	A	Sox2_MA0143.3	-17	0	+	0	0	.
chr3	11799454	11799455	chr3:11799455:C:T	rs1846205	C	T	C	Sox2_MA0143.3	9	0	+	0	0	.
chr3	11818178	11818179	chr3:11818179:G:C	rs2133061	G	C	C	Sox2_MA0143.3	15	0	+	0	0	.
chr3	11916578	11916579	chr3:11916579:C:T	rs550301462	C	T	C	Sox2_MA0143.3	27	0	+	0	0	.
chr3	11927673	11927674	chr3:11927674:C:G	rs303838	C	G	C	Sox2_MA0143.3	24	0	-	0	0	.
chr3	12244127	12244128	chr3:12244128:A:G	rs11929414	A	G	A	Sox2_MA0143.3	-9	0	+	0	0	.
chr3	12333891	12333892	chr3:12333892:T:C	rs1122648	T	C	t	Sox2_MA0143.3	-7	0	+	0	0	.
chr3	12466064	12466065	chr3:12466065:C:T	rs1699348	C	T	c	Sox2_MA0143.3	-16	0	-	0	0	.
chr3	12480071	12480072	chr3:12480072:G:A	rs796291	G	A	G	Sox2_MA0143.3	20	0	-	0	0	.
chr3	12480094	12480095	chr3:12480095:C:T	rs113502199	C	T	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr3	12511006	12511007	chr3:12511007:A:G	rs299659	A	G	a	Sox2_MA0143.3	-17	0	+	0	0	.
chr3	12556983	12556984	chr3:12556984:C:T	rs114199079	C	T	C	Sox2_MA0143.3	26	0	-	0	0	.
chr3	12556990	12556991	chr3:12556991:A:C	chr3:12556991:A:C	A	C	A	Sox2_MA0143.3	19	0	-	0	0	.
chr3	12557009	12557010	chr3:12557010:G:T	rs1016010509	G	T	G	Sox2_MA0143.3	0	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr3	12557029	12557030	chr3:12557030:C:T	rs370905105	C	T	C	Sox2_MA0143.3	-20	0	-	0	0	.
chr3	12662663	12662664	chr3:12662664:C:T	rs10460973	C	T	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr3	12679584	12679585	chr3:12679585:T:C	rs143063088	T	C	C	Sox2_MA0143.3	3	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr3	12752337	12752338	chr3:12752338:C:T	rs73812893	C	T	C	Sox2_MA0143.3	11	0	-	0	0	.
chr3	12752361	12752362	chr3:12752362:A:G	rs11915269	A	G	A	Sox2_MA0143.3	-13	0	-	0	0	.
chr3	12810856	12810857	chr3:12810857:G:T	rs78918296	G	T	G	Sox2_MA0143.3	15	0	+	0	0	.
chr3	12900828	12900829	chr3:12900829:T:C	rs3773309	T	C	T	Sox2_MA0143.3	25	0	+	0	0	.
chr3	12921944	12921945	chr3:12921945:T:A	rs2252275	T	A	A	Sox2_MA0143.3	-15	0	-	0	0	.
chr3	12945077	12945078	chr3:12945078:G:A	rs118109116	G	A	G	Sox2_MA0143.3	21	0	+	0	0	.
chr3	12960900	12960901	chr3:12960901:C:T	rs2596897	C	T	C	Sox2_MA0143.3	1	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr3	12973822	12973823	chr3:12973823:T:C	rs2196013	T	C	T	Sox2_MA0143.3	12	0	+	0	0	.
chr3	12973825	12973826	chr3:12973826:G:T	chr3:12973826:G:T	G	T	G	Sox2_MA0143.3	15	0	+	0	0	.
chr3	12999685	12999686	chr3:12999686:A:C	rs559622372	A	C	A	Sox2_MA0143.3	-16	0	+	0	0	.
chr3	13011273	13011274	chr3:13011274:G:A	rs17775004	G	A	A	Sox2_MA0143.3	25	0	-	0	0	.
chr3	13014075	13014076	chr3:13014076:T:C	rs458459	T	C	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr3	13040384	13040385	chr3:13040385:T:C	rs4684901	T	C	C	Sox2_MA0143.3	17	0	+	0	0	.
chr3	13044785	13044786	chr3:13044786:G:A	rs12496214	G	A	G	Sox2_MA0143.3	-2	0	+	0	0	.
chr3	13153606	13153607	chr3:13153607:A:G	rs93201	A	G	A	Sox2_MA0143.3	26	0	-	0	0	.
chr3	13177472	13177473	chr3:13177473:T:C	rs165266	T	C	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr3	13216989	13216990	chr3:13216990:C:T	rs12632077	C	T	C	Sox2_MA0143.3	19	0	-	0	0	.
chr3	13224986	13224987	chr3:13224987:C:T	rs60969883	C	T	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr3	13236136	13236137	chr3:13236137:A:G	rs530922	A	G	A	Sox2_MA0143.3	16	0	+	0	0	.
chr3	13292616	13292617	chr3:13292617:G:A	rs7636814	G	A	G	Sox2_MA0143.3	7	1	+	8.676919043985553	3.3675628303222993	CCATTGTG
chr3	13292624	13292625	chr3:13292625:A:G	rs73016868	A	G	A	Sox2_MA0143.3	15	0	+	0	0	.
chr3	13309366	13309367	chr3:13309367:C:T	rs544884	C	T	C	Sox2_MA0143.3	13	0	-	0	0	.
chr3	13364202	13364203	chr3:13364203:G:A	rs17038100	G	A	G	Sox2_MA0143.3	20	0	-	0	0	.
chr3	13367739	13367740	chr3:13367740:G:A	rs6442375	G	A	T	Sox2_MA0143.3	-8	0	+	0	0	.
chr3	13385832	13385833	chr3:13385833:T:C	rs73150015	T	C	T	Sox2_MA0143.3	11	0	-	0	0	.
chr3	13401399	13401400	chr3:13401400:C:T	rs73132587	C	T	C	Sox2_MA0143.3	21	0	-	0	0	.
chr3	13526446	13526447	chr3:13526447:G:T	rs115388905	G	T	G	Sox2_MA0143.3	1	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr3	13538653	13538654	chr3:13538654:T:G	rs4684942	T	G	G	Sox2_MA0143.3	2	1	-	9.019595766176417	2.900948058900136	CCATTGTC
chr3	13553570	13553571	chr3:13553571:G:A	rs111252589	G	A	G	Sox2_MA0143.3	-11	0	+	0	0	.
chr3	13574375	13574376	chr3:13574376:G:A	rs140552288	G	A	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr3	13619468	13619469	chr3:13619469:G:T	rs9857050	G	T	T	Sox2_MA0143.3	19	0	+	0	0	.
chr3	13653895	13653896	chr3:13653896:C:T	rs74984895	C	T	C	Sox2_MA0143.3	19	0	+	0	0	.
chr3	13699228	13699229	chr3:13699229:G:A	chr3:13699229:G:A	G	A	G	Sox2_MA0143.3	-3	0	+	0	0	.
chr3	13700740	13700741	chr3:13700741:A:C	rs3856821	A	C	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr3	13702359	13702360	chr3:13702360:T:C	rs55833505	T	C	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr3	13709519	13709520	chr3:13709520:G:A	rs111796649	G	A	G	Sox2_MA0143.3	18	0	+	0	0	.
chr3	13787421	13787422	chr3:13787422:G:A	rs75933758	G	A	G	Sox2_MA0143.3	12	0	-	0	0	.
chr3	13793228	13793229	chr3:13793229:C:T	rs78548410	C	T	C	Sox2_MA0143.3	19	0	-	0	0	.
chr3	13793262	13793263	chr3:13793263:A:G	rs6765016	A	G	A	Sox2_MA0143.3	-15	0	-	0	0	.
chr3	13878856	13878857	chr3:13878857:T:C	rs1345552675	T	C	T	Sox2_MA0143.3	11	0	-	0	0	.
chr3	13879096	13879097	chr3:13879097:G:T	rs73151668	G	T	G	Sox2_MA0143.3	7	1	+	8.864090315184848	9.800647049772198	CCTTTGTG
chr3	14003180	14003181	chr3:14003181:A:G	rs6778884	A	G	a	Sox2_MA0143.3	2	1	+	8.676919043985553	2.5582713367092715	CCATTGTG
chr3	14122783	14122784	chr3:14122784:C:G	rs2607763	C	G	C	Sox2_MA0143.3	21	0	-	0	0	.
chr3	14133761	14133762	chr3:14133762:T:C	rs2340917	T	C	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr3	14154438	14154439	chr3:14154439:C:A	rs78804891	C	A	C	Sox2_MA0143.3	14	0	-	0	0	.
chr3	14230195	14230196	chr3:14230196:G:A	rs6797452	G	A	A	Sox2_MA0143.3	9	0	+	0	0	.
chr3	14230203	14230204	chr3:14230204:T:G	rs9857542	T	G	T	Sox2_MA0143.3	17	0	+	0	0	.
chr3	14250002	14250003	chr3:14250003:G:A	rs7626720	G	A	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr3	14253048	14253049	chr3:14253049:T:C	rs2170454	T	C	C	Sox2_MA0143.3	27	0	-	0	0	.
chr3	14313260	14313261	chr3:14313261:T:G	rs900191	T	G	G	Sox2_MA0143.3	16	0	-	0	0	.
chr3	14314768	14314769	chr3:14314769:C:T	rs7641658	C	T	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr3	14319539	14319540	chr3:14319540:T:G	rs73817724	T	G	G	Sox2_MA0143.3	24	0	-	0	0	.
chr3	14333634	14333635	chr3:14333635:G:A	rs746776161	G	A	G	Sox2_MA0143.3	20	0	-	0	0	.
chr3	14386601	14386602	chr3:14386602:C:T	rs115627159	C	T	c	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr3	14386622	14386623	chr3:14386623:C:T	rs4684214	C	T	T	Sox2_MA0143.3	21	0	+	0	0	.
chr3	14406006	14406007	chr3:14406007:G:A	rs115294902	G	A	g	Sox2_MA0143.3	-1	0	+	0	0	.
chr3	14422790	14422791	chr3:14422791:C:T	rs111405663	C	T	C	Sox2_MA0143.3	20	0	+	0	0	.
chr3	14504267	14504268	chr3:14504268:A:G	rs6800512	A	G	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr3	14514666	14514667	chr3:14514667:G:A	rs4684228	G	A	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr3	14673671	14673672	chr3:14673672:C:G	rs17040110	C	G	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr3	14674863	14674864	chr3:14674864:G:A	rs2975	G	A	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr3	14677968	14677969	chr3:14677969:G:C	rs12691218	G	C	G	Sox2_MA0143.3	9	0	+	0	0	.
chr3	14705904	14705905	chr3:14705905:C:T	rs9811756	C	T	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr3	14765842	14765843	chr3:14765843:G:A	rs1017476676	G	A	G	Sox2_MA0143.3	22	0	-	0	0	.
chr3	14765867	14765868	chr3:14765868:T:C	rs11128719	T	C	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr3	14765868	14765869	chr3:14765869:C:T	rs539639975	C	T	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr3	14778144	14778145	chr3:14778145:A:G	rs13072398	A	G	A	Sox2_MA0143.3	23	0	-	0	0	.
chr3	14786606	14786607	chr3:14786607:C:T	rs1687288	C	T	C	Sox2_MA0143.3	27	0	-	0	0	.
chr3	14787773	14787774	chr3:14787774:T:C	rs13080265	T	C	T	Sox2_MA0143.3	-9	0	+	0	0	.
chr3	14877652	14877653	chr3:14877653:T:G	chr3:14877653:T:G	T	G	T	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr3	14991344	14991345	chr3:14991345:C:T	rs144104498	C	T	C	Sox2_MA0143.3	25	0	-	0	0	.
chr3	15266732	15266733	chr3:15266733:A:G	rs3773469	A	G	A	Sox2_MA0143.3	-11	0	+	0	0	.
chr3	15308650	15308651	chr3:15308651:T:C	rs76437062	T	C	T	Sox2_MA0143.3	14	0	-	0	0	.
chr3	15310457	15310458	chr3:15310458:C:T	rs6793635	C	T	T	Sox2_MA0143.3	0	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr3	15500227	15500228	chr3:15500228:G:A	rs10155040	G	A	G	Sox2_MA0143.3	5	1	+	9.206767037375712	2.298012258060492	CCTTTGTC
chr3	15519207	15519208	chr3:15519208:T:C	rs114071457	T	C	T	Sox2_MA0143.3	23	0	+	0	0	.
chr3	15522192	15522193	chr3:15522193:C:T	rs3806659	C	T	C	Sox2_MA0143.3	1	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr3	15522895	15522896	chr3:15522896:G:A	rs73033057	G	A	G	Sox2_MA0143.3	1	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr3	15601816	15601817	chr3:15601817:C:T	rs114567021	C	T	C	Sox2_MA0143.3	18	0	+	0	0	.
chr3	15636336	15636337	chr3:15636337:C:T	rs182506400	C	T	C	Sox2_MA0143.3	14	0	-	0	0	.
chr3	15636359	15636360	chr3:15636360:G:A	rs741748	G	A	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr3	15636437	15636438	chr3:15636438:C:A	rs186747656	C	A	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr3	15713477	15713478	chr3:15713478:C:T	rs79599089	C	T	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr3	15754289	15754290	chr3:15754290:T:G	rs76711703	T	G	T	Sox2_MA0143.3	18	0	+	0	0	.
chr3	15815957	15815958	chr3:15815958:A:G	rs2166760	A	G	A	Sox2_MA0143.3	21	0	-	0	0	.
chr3	15819793	15819794	chr3:15819794:C:T	rs76204907	C	T	C	Sox2_MA0143.3	5	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr3	15983069	15983070	chr3:15983070:A:G	rs80050698	A	G	A	Sox2_MA0143.3	-12	0	+	0	0	.
chr3	16054558	16054559	chr3:16054559:A:G	rs897204	A	G	G	Sox2_MA0143.3	15	0	-	0	0	.
chr3	16056232	16056233	chr3:16056233:G:T	rs6442573	G	T	G	Sox2_MA0143.3	12	0	+	0	0	.
chr3	16056233	16056234	chr3:16056234:G:T	rs6442574	G	T	G	Sox2_MA0143.3	13	0	+	0	0	.
chr3	16074461	16074462	chr3:16074462:A:G	rs2346289	A	G	G	Sox2_MA0143.3	16	0	-	0	0	.
chr3	16086096	16086097	chr3:16086097:G:C	rs187402018	G	C	G	Sox2_MA0143.3	13	0	-	0	0	.
chr3	16086109	16086110	chr3:16086110:G:C	rs112121658	G	C	G	Sox2_MA0143.3	0	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr3	16144112	16144113	chr3:16144113:T:C	rs1827763	T	C	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr3	16148917	16148918	chr3:16148918:G:C	rs2657585	G	C	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr3	16174797	16174798	chr3:16174798:G:A	rs59893869	G	A	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr3	16204182	16204183	chr3:16204183:C:T	rs6804329	C	T	C	Sox2_MA0143.3	9	0	+	0	0	.
chr3	16204188	16204189	chr3:16204189:C:T	chr3:16204189:C:T	C	T	C	Sox2_MA0143.3	15	0	+	0	0	.
chr3	16237042	16237043	chr3:16237043:G:A	rs113823850	G	A	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr3	16239302	16239303	chr3:16239303:G:A	rs75728589	G	A	G	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr3	16304280	16304281	chr3:16304281:G:C	rs189763180	G	C	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr3	16320621	16320622	chr3:16320622:G:T	rs478483	G	T	T	Sox2_MA0143.3	12	0	-	0	0	.
chr3	16370023	16370024	chr3:16370024:T:C	rs17042188	T	C	T	Sox2_MA0143.3	20	0	-	0	0	.
chr3	16384541	16384542	chr3:16384542:T:C	rs59930398	T	C	T	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr3	16521616	16521617	chr3:16521617:C:G	chr3:16521617:C:G	C	G	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr3	16554279	16554280	chr3:16554280:G:C	rs74608231	G	C	G	Sox2_MA0143.3	-14	0	+	0	0	.
chr3	16601139	16601140	chr3:16601140:A:C	rs555437101	A	C	A	Sox2_MA0143.3	17	0	+	0	0	.
chr3	16771254	16771255	chr3:16771255:C:G	rs11917182	C	G	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr3	16771263	16771264	chr3:16771264:T:C	rs2218736	T	C	T	Sox2_MA0143.3	3	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr3	16801665	16801666	chr3:16801666:T:C	rs17042753	T	C	T	Sox2_MA0143.3	-8	0	+	0	0	.
chr3	16886566	16886567	chr3:16886567:T:A	rs1992381	T	A	T	Sox2_MA0143.3	-8	0	+	0	0	.
chr3	16886592	16886593	chr3:16886593:G:A	rs1992382	G	A	A	Sox2_MA0143.3	18	0	+	0	0	.
chr3	16901568	16901569	chr3:16901569:A:G	rs79763738	A	G	A	Sox2_MA0143.3	11	0	+	0	0	.
chr3	16940190	16940191	chr3:16940191:G:T	rs4685405	G	T	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr3	17116492	17116493	chr3:17116493:C:A	rs115488029	C	A	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr3	17173947	17173948	chr3:17173948:T:C	rs2733482	T	C	T	Sox2_MA0143.3	-18	0	-	0	0	.
chr3	17276945	17276946	chr3:17276946:A:C	rs2733485	A	C	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr3	17431853	17431854	chr3:17431854:A:G	rs9864494	A	G	G	Sox2_MA0143.3	17	0	-	0	0	.
chr3	17516674	17516675	chr3:17516675:C:A	rs78633307	C	A	C	Sox2_MA0143.3	10	0	+	0	0	.
chr3	17747737	17747738	chr3:17747738:G:C	rs778410522	G	C	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr3	17891571	17891572	chr3:17891572:G:A	rs9819634	G	A	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr3	18223655	18223656	chr3:18223656:T:C	rs751640306	T	C	T	Sox2_MA0143.3	21	0	+	0	0	.
chr3	18344740	18344741	chr3:18344741:A:T	rs62238529	A	T	A	Sox2_MA0143.3	-2	0	-	0	0	.
chr3	18386957	18386958	chr3:18386958:C:T	rs13321420	C	T	T	Sox2_MA0143.3	19	0	-	0	0	.
chr3	18535715	18535716	chr3:18535716:G:A	rs1828729	G	A	A	Sox2_MA0143.3	1	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr3	18565589	18565590	chr3:18565590:A:T	rs184520680	A	T	A	Sox2_MA0143.3	6	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr3	18633151	18633152	chr3:18633152:A:C	rs4619804	A	C	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr3	18633187	18633188	chr3:18633188:A:G	rs77639843	A	G	A	Sox2_MA0143.3	17	0	+	0	0	.
chr3	18776473	18776474	chr3:18776474:G:C	rs6806297	G	C	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr3	18784176	18784177	chr3:18784177:T:A	rs4073490	T	A	T	Sox2_MA0143.3	-12	0	-	0	0	.
chr3	18795065	18795066	chr3:18795066:G:A	rs9857553	G	A	G	Sox2_MA0143.3	-3	0	-	0	0	.
chr3	19147010	19147011	chr3:19147011:T:A	rs557907624	T	A	T	Sox2_MA0143.3	12	0	-	0	0	.
chr3	19267132	19267133	chr3:19267133:A:T	rs574970804	A	T	A	Sox2_MA0143.3	14	0	-	0	0	.
chr3	19486747	19486748	chr3:19486748:T:C	rs35640367	T	C	T	Sox2_MA0143.3	22	0	+	0	0	.
chr3	19507488	19507489	chr3:19507489:G:A	chr3:19507489:G:A	G	A	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr3	19757797	19757798	chr3:19757798:T:G	rs4858093	T	G	T	Sox2_MA0143.3	21	0	+	0	0	.
chr3	19894286	19894287	chr3:19894287:T:C	rs62279125	T	C	T	Sox2_MA0143.3	9	0	+	0	0	.
chr3	19946900	19946901	chr3:19946901:G:A	rs78836763	G	A	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr3	20055023	20055024	chr3:20055024:C:T	rs77510832	C	T	C	Sox2_MA0143.3	0	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr3	20107710	20107711	chr3:20107711:A:G	rs9828701	A	G	a	Sox2_MA0143.3	-6	0	+	0	0	.
chr3	20256487	20256488	chr3:20256488:G:T	rs11928793	G	T	G	Sox2_MA0143.3	5	1	+	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr3	20256506	20256507	chr3:20256507:T:C	rs11708800	T	C	T	Sox2_MA0143.3	24	0	+	0	0	.
chr3	20523584	20523585	chr3:20523585:G:A	rs74814098	G	A	G	Sox2_MA0143.3	12	0	+	0	0	.
chr3	20711875	20711876	chr3:20711876:T:C	rs75065326	T	C	T	Sox2_MA0143.3	2	1	+	9.800647049772198	3.494828071296623	CCTTTGTT
chr3	20838169	20838170	chr3:20838170:T:A	rs981694	T	A	T	Sox2_MA0143.3	18	0	+	0	0	.
chr3	20917720	20917721	chr3:20917721:C:T	rs79165492	C	T	C	Sox2_MA0143.3	24	0	-	0	0	.
chr3	20990988	20990989	chr3:20990989:T:C	rs35574796	T	C	T	Sox2_MA0143.3	-14	0	+	0	0	.
chr3	21044665	21044666	chr3:21044666:C:T	rs924224	C	T	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr3	21124695	21124696	chr3:21124696:G:C	rs10780007	G	C	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr3	21223952	21223953	chr3:21223953:T:C	rs9831773	T	C	T	Sox2_MA0143.3	-1	0	+	0	0	.
chr3	21229550	21229551	chr3:21229551:A:T	rs1347636	A	T	T	Sox2_MA0143.3	-5	0	+	0	0	.
chr3	21273700	21273701	chr3:21273701:C:T	rs4045949	C	T	T	Sox2_MA0143.3	-19	0	-	0	0	.
chr3	21303038	21303039	chr3:21303039:C:G	rs648168	C	G	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr3	21331599	21331600	chr3:21331600:A:G	rs2661387	A	G	A	Sox2_MA0143.3	9	0	+	0	0	.
chr3	21487804	21487805	chr3:21487805:T:C	rs7617195	T	C	T	Sox2_MA0143.3	8	0	+	0	0	.
chr3	21628119	21628120	chr3:21628120:C:G	chr3:21628120:C:G	C	G	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr3	21645760	21645761	chr3:21645761:A:G	rs13080106	A	G	A	Sox2_MA0143.3	4	1	-	9.206767037375712	2.2980122580604916	CCTTTGTC
chr3	21673002	21673003	chr3:21673003:G:T	rs9850039	G	T	G	Sox2_MA0143.3	19	0	+	0	0	.
chr3	21730564	21730565	chr3:21730565:T:C	rs12489188	T	C	T	Sox2_MA0143.3	26	0	-	0	0	.
chr3	21750714	21750715	chr3:21750715:C:T	rs541807353	C	T	C	Sox2_MA0143.3	22	0	-	0	0	.
chr3	21789844	21789845	chr3:21789845:A:C	rs3933112	A	C	A	Sox2_MA0143.3	-1	0	+	0	0	.
chr3	21795934	21795935	chr3:21795935:G:A	rs1606851	G	A	A	Sox2_MA0143.3	0	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr3	21795953	21795954	chr3:21795954:G:C	rs564460291	G	C	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr3	21808583	21808584	chr3:21808584:G:A	rs62239199	G	A	G	Sox2_MA0143.3	11	0	+	0	0	.
chr3	21826472	21826473	chr3:21826473:G:T	rs146452373	G	T	T	Sox2_MA0143.3	23	0	-	0	0	.
chr3	21860642	21860643	chr3:21860643:T:C	rs73052612	T	C	t	Sox2_MA0143.3	6	1	+	9.019595766176417	2.110840986861197	CCATTGTC
chr3	21918891	21918892	chr3:21918892:C:T	rs1352136	C	T	T	Sox2_MA0143.3	9	0	+	0	0	.
chr3	21942971	21942972	chr3:21942972:C:T	rs77058765	C	T	C	Sox2_MA0143.3	24	0	-	0	0	.
chr3	22015649	22015650	chr3:22015650:G:T	rs190491	G	T	G	Sox2_MA0143.3	16	0	-	0	0	.
chr3	22016320	22016321	chr3:22016321:A:G	rs1383091	A	G	A	Sox2_MA0143.3	19	0	-	0	0	.
chr3	22016323	22016324	chr3:22016324:T:C	rs13083345	T	C	T	Sox2_MA0143.3	16	0	-	0	0	.
chr3	22016339	22016340	chr3:22016340:G:A	rs28638460	G	A	G	Sox2_MA0143.3	0	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr3	22063902	22063903	chr3:22063903:C:G	rs779168	C	G	G	Sox2_MA0143.3	22	0	+	0	0	.
chr3	22782889	22782890	chr3:22782890:A:T	rs552225	A	T	A	Sox2_MA0143.3	-20	0	+	0	0	.
chr3	22810577	22810578	chr3:22810578:C:A	rs159223	C	A	A	Sox2_MA0143.3	-19	0	+	0	0	.
chr3	22904654	22904655	chr3:22904655:A:G	rs6550714	A	G	G	Sox2_MA0143.3	10	0	-	0	0	.
chr3	22904680	22904681	chr3:22904681:T:C	rs698224	T	C	T	Sox2_MA0143.3	-16	0	-	0	0	.
chr3	23099916	23099917	chr3:23099917:A:G	rs4558781	A	G	G	Sox2_MA0143.3	27	0	+	0	0	.
chr3	23188807	23188808	chr3:23188808:C:T	rs6550743	C	T	C	Sox2_MA0143.3	23	0	-	0	0	.
chr3	23207577	23207578	chr3:23207578:A:C	rs4858483	A	C	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr3	23431061	23431062	chr3:23431062:A:G	rs76202993	A	G	A	Sox2_MA0143.3	3	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr3	23624060	23624061	chr3:23624061:A:G	rs73038898	A	G	A	Sox2_MA0143.3	27	0	+	0	0	.
chr3	23626750	23626751	chr3:23626751:T:C	rs9879425	T	C	T	Sox2_MA0143.3	26	0	+	0	0	.
chr3	23657138	23657139	chr3:23657139:T:C	rs11928874	T	C	T	Sox2_MA0143.3	15	0	-	0	0	.
chr3	23669649	23669650	chr3:23669650:A:C	rs28569360	A	C	C	Sox2_MA0143.3	27	0	-	0	0	.
chr3	23704477	23704478	chr3:23704478:C:G	rs9819064	C	G	C	Sox2_MA0143.3	0	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr3	23751604	23751605	chr3:23751605:A:C	chr3:23751605:A:C	A	C	A	Sox2_MA0143.3	-16	0	+	0	0	.
chr3	23751626	23751627	chr3:23751627:T:C	rs1473350599	T	C	T	Sox2_MA0143.3	6	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr3	23751696	23751697	chr3:23751697:G:C	rs77108833	G	C	G	Sox2_MA0143.3	25	0	+	0	0	.
chr3	23775263	23775264	chr3:23775264:C:A	rs76298329	C	A	C	Sox2_MA0143.3	11	0	+	0	0	.
chr3	23810106	23810107	chr3:23810107:A:G	rs367675478	A	G	A	Sox2_MA0143.3	-8	0	+	0	0	.
chr3	23810409	23810410	chr3:23810410:G:T	rs115008405	G	T	G	Sox2_MA0143.3	16	0	+	0	0	.
chr3	23859580	23859581	chr3:23859581:C:G	rs145056652	C	G	C	Sox2_MA0143.3	0	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr3	24181818	24181819	chr3:24181819:C:T	rs2596617	C	T	T	Sox2_MA0143.3	22	0	+	0	0	.
chr3	24199955	24199956	chr3:24199956:T:A	rs72619924	T	A	T	Sox2_MA0143.3	17	0	-	0	0	.
chr3	24199969	24199970	chr3:24199970:A:G	rs79947603	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr3	24213025	24213026	chr3:24213026:C:T	rs7632417	C	T	T	Sox2_MA0143.3	19	0	-	0	0	.
chr3	24213058	24213059	chr3:24213059:C:T	rs746875	C	T	T	Sox2_MA0143.3	-14	0	-	0	0	.
chr3	24254789	24254790	chr3:24254790:C:T	rs73148311	C	T	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr3	24370364	24370365	chr3:24370365:T:C	rs1505289	T	C	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr3	24373085	24373086	chr3:24373086:C:T	rs78144519	C	T	C	Sox2_MA0143.3	13	0	+	0	0	.
chr3	24383884	24383885	chr3:24383885:C:T	rs12495379	C	T	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr3	24488161	24488162	chr3:24488162:A:G	rs6805614	A	G	A	Sox2_MA0143.3	-5	0	+	0	0	.
chr3	24493609	24493610	chr3:24493610:A:G	rs62230464	A	G	A	Sox2_MA0143.3	18	0	-	0	0	.
chr3	24590227	24590228	chr3:24590228:A:G	rs9830855	A	G	A	Sox2_MA0143.3	13	0	+	0	0	.
chr3	24598844	24598845	chr3:24598845:T:C	rs78643160	T	C	T	Sox2_MA0143.3	23	0	-	0	0	.
chr3	24640391	24640392	chr3:24640392:G:A	rs9817530	G	A	A	Sox2_MA0143.3	24	0	-	0	0	.
chr3	24640416	24640417	chr3:24640417:G:A	rs138343523	G	A	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr3	24661242	24661243	chr3:24661243:T:G	rs13433753	T	G	T	Sox2_MA0143.3	23	0	+	0	0	.
chr3	24683391	24683392	chr3:24683392:A:G	rs4858630	A	G	A	Sox2_MA0143.3	9	0	-	0	0	.
chr3	24683411	24683412	chr3:24683412:T:C	rs115110602	T	C	T	Sox2_MA0143.3	-11	0	-	0	0	.
chr3	24684128	24684129	chr3:24684129:A:T	rs9825348	A	T	T	Sox2_MA0143.3	2	1	-	9.800647049772198	9.613475778572903	CCTTTGTT
chr3	24851064	24851065	chr3:24851065:G:C	rs73152442	G	C	G	Sox2_MA0143.3	23	0	-	0	0	.
chr3	24937650	24937651	chr3:24937651:C:T	rs2363530	C	T	T	Sox2_MA0143.3	-7	0	-	0	0	.
chr3	24951619	24951620	chr3:24951620:G:C	rs35306981	G	C	G	Sox2_MA0143.3	18	0	+	0	0	.
chr3	24994988	24994989	chr3:24994989:A:G	rs71311519	A	G	A	Sox2_MA0143.3	13	0	+	0	0	.
chr3	25034099	25034100	chr3:25034100:T:C	rs1846556	T	C	T	Sox2_MA0143.3	-11	0	-	0	0	.
chr3	25074207	25074208	chr3:25074208:A:C	rs62228543	A	C	A	Sox2_MA0143.3	-18	0	-	0	0	.
chr3	25287639	25287640	chr3:25287640:A:C	rs2885837	A	C	A	Sox2_MA0143.3	-20	0	+	0	0	.
chr3	25295481	25295482	chr3:25295482:A:G	rs77558726	A	G	A	Sox2_MA0143.3	-8	0	+	0	0	.
chr3	25295499	25295500	chr3:25295500:T:C	rs73154975	T	C	T	Sox2_MA0143.3	10	0	+	0	0	.
chr3	25324652	25324653	chr3:25324653:C:G	rs322666	C	G	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr3	25476730	25476731	chr3:25476731:A:G	rs17016484	A	G	G	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr3	25509117	25509118	chr3:25509118:C:G	rs1153588	C	G	G	Sox2_MA0143.3	12	0	-	0	0	.
chr3	25561170	25561171	chr3:25561171:T:C	rs7610831	T	C	T	Sox2_MA0143.3	17	0	+	0	0	.
chr3	25563107	25563108	chr3:25563108:C:T	rs17016773	C	T	C	Sox2_MA0143.3	23	0	-	0	0	.
chr3	25563150	25563151	chr3:25563151:A:G	rs13081182	A	G	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr3	25748288	25748289	chr3:25748289:A:T	rs2101478	A	T	A	Sox2_MA0143.3	6	1	-	9.613475778572903	2.7047209992576837	CCATTGTT
chr3	25834011	25834012	chr3:25834012:T:C	rs10212393	T	C	T	Sox2_MA0143.3	4	1	+	9.206767037375712	2.2980122580604916	CCTTTGTC
chr3	25904538	25904539	chr3:25904539:T:G	rs9874424	T	G	G	Sox2_MA0143.3	22	0	-	0	0	.
chr3	25962200	25962201	chr3:25962201:A:G	rs6808210	A	G	A	Sox2_MA0143.3	22	0	-	0	0	.
chr3	26083141	26083142	chr3:26083142:T:G	rs9851319	T	G	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr3	26708538	26708539	chr3:26708539:G:T	rs59667942	G	T	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr3	26708545	26708546	chr3:26708546:T:C	rs6551131	T	C	C	Sox2_MA0143.3	3	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr3	26752624	26752625	chr3:26752625:G:C	rs139394025	G	C	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr3	26768177	26768178	chr3:26768178:A:G	rs73061367	A	G	G	Sox2_MA0143.3	9	0	+	0	0	.
chr3	26768195	26768196	chr3:26768196:A:G	rs73061370	A	G	G	Sox2_MA0143.3	27	0	+	0	0	.
chr3	27206836	27206837	chr3:27206837:C:T	rs9844682	C	T	C	Sox2_MA0143.3	15	0	-	0	0	.
chr3	27349986	27349987	chr3:27349987:A:G	rs76283277	A	G	A	Sox2_MA0143.3	-4	0	-	0	0	.
chr3	27506775	27506776	chr3:27506776:C:A	rs3856675	C	A	C	Sox2_MA0143.3	21	0	+	0	0	.
chr3	27521121	27521122	chr3:27521122:A:G	rs2643825	A	G	A	Sox2_MA0143.3	8	0	-	0	0	.
chr3	27533272	27533273	chr3:27533273:C:T	rs114692947	C	T	c	Sox2_MA0143.3	-17	0	-	0	0	.
chr3	27548858	27548859	chr3:27548859:C:T	rs56798637	C	T	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr3	27597650	27597651	chr3:27597651:A:G	rs9855458	A	G	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr3	27628212	27628213	chr3:27628213:C:T	rs57657217	C	T	T	Sox2_MA0143.3	11	0	-	0	0	.
chr3	27656324	27656325	chr3:27656325:G:T	rs2077631	G	T	G	Sox2_MA0143.3	0	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr3	27659392	27659393	chr3:27659393:C:T	chr3:27659393:C:T	C	T	C	Sox2_MA0143.3	23	0	-	0	0	.
chr3	27715124	27715125	chr3:27715125:A:C	rs372829864	A	C	A	Sox2_MA0143.3	-15	0	-	0	0	.
chr3	27730473	27730474	chr3:27730474:C:T	rs78239937	C	T	C	Sox2_MA0143.3	8	0	+	0	0	.
chr3	27730485	27730486	chr3:27730486:T:C	rs9868726	T	C	C	Sox2_MA0143.3	20	0	+	0	0	.
chr3	27794430	27794431	chr3:27794431:T:C	rs4350881	T	C	C	Sox2_MA0143.3	11	0	+	0	0	.
chr3	27794435	27794436	chr3:27794436:T:C	rs2887945	T	C	C	Sox2_MA0143.3	16	0	+	0	0	.
chr3	28023214	28023215	chr3:28023215:T:C	rs17020847	T	C	C	Sox2_MA0143.3	14	0	+	0	0	.
chr3	28234794	28234795	chr3:28234795:A:G	rs11717202	A	G	G	Sox2_MA0143.3	20	0	+	0	0	.
chr3	28444438	28444439	chr3:28444439:T:C	rs537336129	T	C	T	Sox2_MA0143.3	-10	0	-	0	0	.
chr3	28589632	28589633	chr3:28589633:T:C	rs4521182	T	C	T	Sox2_MA0143.3	-4	0	+	0	0	.
chr3	28589663	28589664	chr3:28589664:G:A	rs4356777	G	A	A	Sox2_MA0143.3	27	0	+	0	0	.
chr3	28761602	28761603	chr3:28761603:C:T	rs1903586	C	T	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr3	28868342	28868343	chr3:28868343:G:A	rs9833538	G	A	A	Sox2_MA0143.3	20	0	+	0	0	.
chr3	29057619	29057620	chr3:29057620:T:A	rs635146	T	A	T	Sox2_MA0143.3	-10	0	+	0	0	.
chr3	29171634	29171635	chr3:29171635:C:G	rs149639079	C	G	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr3	29171966	29171967	chr3:29171967:T:C	chr3:29171967:T:C	T	C	T	Sox2_MA0143.3	4	1	+	8.676919043985553	1.7681642646703322	CCATTGTG
chr3	29172128	29172129	chr3:29172129:G:A	rs9857637	G	A	A	Sox2_MA0143.3	-2	0	-	0	0	.
chr3	29178778	29178779	chr3:29178779:C:T	rs77720953	C	T	C	Sox2_MA0143.3	14	0	+	0	0	.
chr3	29363073	29363074	chr3:29363074:G:C	rs6784537	G	C	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr3	29397008	29397009	chr3:29397009:C:T	rs7642033	C	T	t	Sox2_MA0143.3	0	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr3	29451946	29451947	chr3:29451947:C:T	rs7632124	C	T	C	Sox2_MA0143.3	11	0	+	0	0	.
chr3	29451951	29451952	chr3:29451952:A:G	rs1946825	A	G	A	Sox2_MA0143.3	16	0	+	0	0	.
chr3	29618567	29618568	chr3:29618568:T:C	rs111978465	T	C	T	Sox2_MA0143.3	-14	0	+	0	0	.
chr3	29655210	29655211	chr3:29655211:G:A	rs151134109	G	A	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr3	29695667	29695668	chr3:29695668:A:C	rs562274176	A	C	A	Sox2_MA0143.3	23	0	+	0	0	.
chr3	29751778	29751779	chr3:29751779:G:A	rs1595900	G	A	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr3	29799953	29799954	chr3:29799954:A:C	rs6784690	A	C	C	Sox2_MA0143.3	9	0	+	0	0	.
chr3	29972896	29972897	chr3:29972897:G:A	rs12492165	G	A	G	Sox2_MA0143.3	-3	0	+	0	0	.
chr3	29972921	29972922	chr3:29972922:C:G	chr3:29972922:C:G	C	G	C	Sox2_MA0143.3	22	0	+	0	0	.
chr3	30013033	30013034	chr3:30013034:T:G	rs79074545	T	G	T	Sox2_MA0143.3	26	0	-	0	0	.
chr3	30013041	30013042	chr3:30013042:A:G	rs4504136	A	G	A	Sox2_MA0143.3	18	0	-	0	0	.
chr3	30043433	30043434	chr3:30043434:C:T	rs113280227	C	T	C	Sox2_MA0143.3	18	0	-	0	0	.
chr3	30043443	30043444	chr3:30043444:G:A	rs79790474	G	A	G	Sox2_MA0143.3	8	0	-	0	0	.
chr3	30043460	30043461	chr3:30043461:C:T	rs76729498	C	T	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr3	30125048	30125049	chr3:30125049:G:A	rs28748108	G	A	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr3	30125062	30125063	chr3:30125063:T:A	rs13069632	T	A	T	Sox2_MA0143.3	-15	0	-	0	0	.
chr3	30140607	30140608	chr3:30140608:C:T	rs76908165	C	T	C	Sox2_MA0143.3	16	0	-	0	0	.
chr3	30162845	30162846	chr3:30162846:C:T	rs78826701	C	T	C	Sox2_MA0143.3	5	1	-	8.676919043985553	1.7681642646703324	CCATTGTG
chr3	30167606	30167607	chr3:30167607:T:C	rs111769813	T	C	T	Sox2_MA0143.3	-19	0	+	0	0	.
chr3	30215961	30215962	chr3:30215962:C:A	rs2082595	C	A	C	Sox2_MA0143.3	20	0	-	0	0	.
chr3	30215995	30215996	chr3:30215996:T:C	rs568876824	T	C	T	Sox2_MA0143.3	-14	0	-	0	0	.
chr3	30231934	30231935	chr3:30231935:C:G	rs74647317	C	G	c	Sox2_MA0143.3	-18	0	-	0	0	.
chr3	30287200	30287201	chr3:30287201:T:C	rs7651821	T	C	C	Sox2_MA0143.3	8	0	+	0	0	.
chr3	30287205	30287206	chr3:30287206:C:A	rs78706229	C	A	C	Sox2_MA0143.3	13	0	+	0	0	.
chr3	30315934	30315935	chr3:30315935:T:G	rs7632716	T	G	T	Sox2_MA0143.3	4	1	+	8.676919043985553	1.7681642646703322	CCATTGTG
chr3	30315944	30315945	chr3:30315945:G:A	rs1390297	G	A	A	Sox2_MA0143.3	14	0	+	0	0	.
chr3	30428434	30428435	chr3:30428435:A:G	rs6549991	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr3	30441309	30441310	chr3:30441310:G:T	rs113472527	G	T	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr3	30498741	30498742	chr3:30498742:A:T	rs56276908	A	T	A	Sox2_MA0143.3	-9	0	-	0	0	.
chr3	30498742	30498743	chr3:30498743:C:T	rs55813384	C	T	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr3	30586716	30586717	chr3:30586717:T:G	rs78435385	T	G	T	Sox2_MA0143.3	16	0	-	0	0	.
chr3	30648837	30648838	chr3:30648838:C:A	rs891594	C	A	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr3	30744892	30744893	chr3:30744893:G:A	rs6550011	G	A	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr3	30747749	30747750	chr3:30747750:C:T	rs73056874	C	T	C	Sox2_MA0143.3	11	0	+	0	0	.
chr3	30770994	30770995	chr3:30770995:G:A	rs9854881	G	A	A	Sox2_MA0143.3	26	0	-	0	0	.
chr3	30855587	30855588	chr3:30855588:T:C	rs62233361	T	C	C	Sox2_MA0143.3	2	1	-	9.613475778572903	3.494828071296623	CCATTGTT
chr3	30886836	30886837	chr3:30886837:G:T	rs55644344	G	T	G	Sox2_MA0143.3	7	1	-	9.019595766176417	3.3675628303222993	CCATTGTC
chr3	30996634	30996635	chr3:30996635:A:G	rs558415789	A	G	A	Sox2_MA0143.3	6	1	-	9.613475778572903	2.7047209992576837	CCATTGTT
chr3	31010055	31010056	chr3:31010056:C:T	rs9870926	C	T	C	Sox2_MA0143.3	8	0	-	0	0	.
chr3	31025959	31025960	chr3:31025960:C:T	rs294314	C	T	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr3	31172196	31172197	chr3:31172197:A:G	rs9852012	A	G	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr3	31221281	31221282	chr3:31221282:C:G	rs7632816	C	G	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr3	31354609	31354610	chr3:31354610:A:G	rs74684828	A	G	A	Sox2_MA0143.3	-20	0	-	0	0	.
chr3	31409994	31409995	chr3:31409995:G:A	rs74596308	G	A	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr3	31442937	31442938	chr3:31442938:G:C	rs1495171	G	C	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr3	31443909	31443910	chr3:31443910:G:T	rs9879046	G	T	.	Sox2_MA0143.3	18	0	-	0	0	.
chr3	31443927	31443928	chr3:31443928:G:C	rs9879056	G	C	.	Sox2_MA0143.3	0	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr3	31693688	31693689	chr3:31693689:A:T	rs4485757	A	T	A	Sox2_MA0143.3	12	0	+	0	0	.
chr3	31716992	31716993	chr3:31716993:T:C	rs3792546	T	C	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr3	31824668	31824669	chr3:31824669:C:T	rs77506788	C	T	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr3	31879154	31879155	chr3:31879155:T:C	rs4955114	T	C	T	Sox2_MA0143.3	7	1	-	3.5547341015215945	8.864090315184848	CCTTTGTA
chr3	31883821	31883822	chr3:31883822:C:A	rs144831336	C	A	C	Sox2_MA0143.3	23	0	-	0	0	.
chr3	31978866	31978867	chr3:31978867:A:G	rs182678849	A	G	A	Sox2_MA0143.3	17	0	-	0	0	.
chr3	32077756	32077757	chr3:32077757:G:A	rs78501806	G	A	G	Sox2_MA0143.3	7	1	+	8.864090315184848	3.5547341015215945	CCTTTGTG
chr3	32097794	32097795	chr3:32097795:A:C	rs9862938	A	C	a	Sox2_MA0143.3	-20	0	-	0	0	.
chr3	32105586	32105587	chr3:32105587:G:A	rs532875168	G	A	G	Sox2_MA0143.3	20	0	-	0	0	.
chr3	32166414	32166415	chr3:32166415:T:C	rs6788436	T	C	T	Sox2_MA0143.3	-11	0	+	0	0	.
chr3	32180752	32180753	chr3:32180753:G:A	rs13079729	G	A	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr3	32208697	32208698	chr3:32208698:T:C	rs9870048	T	C	C	Sox2_MA0143.3	6	1	+	9.206767037375712	2.298012258060492	CCTTTGTC
chr3	32311529	32311530	chr3:32311530:C:T	rs79939979	C	T	C	Sox2_MA0143.3	10	0	+	0	0	.
chr3	32311544	32311545	chr3:32311545:C:T	rs374048772	C	T	C	Sox2_MA0143.3	25	0	+	0	0	.
chr3	32385758	32385759	chr3:32385759:C:T	rs55796052	C	T	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr3	32410204	32410205	chr3:32410205:C:A	rs17029405	C	A	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr3	32436331	32436332	chr3:32436332:G:A	rs347142	G	A	A	Sox2_MA0143.3	-14	0	-	0	0	.
chr3	32443417	32443418	chr3:32443418:T:A	rs164222	T	A	A	Sox2_MA0143.3	-6	0	+	0	0	.
chr3	32460408	32460409	chr3:32460409:T:C	rs80258271	T	C	T	Sox2_MA0143.3	4	1	+	8.864090315184848	1.9553355358696274	CCTTTGTG
chr3	32466249	32466250	chr3:32466250:A:G	rs375706	A	G	G	Sox2_MA0143.3	25	0	+	0	0	.
chr3	32522991	32522992	chr3:32522992:A:G	rs164219	A	G	G	Sox2_MA0143.3	26	0	-	0	0	.
chr3	32703622	32703623	chr3:32703623:A:G	rs9852462	A	G	G	Sox2_MA0143.3	8	0	-	0	0	.
chr3	32797278	32797279	chr3:32797279:T:A	rs114634632	T	A	t	Sox2_MA0143.3	-10	0	+	0	0	.
chr3	32859358	32859359	chr3:32859359:A:G	rs148860340	A	G	A	Sox2_MA0143.3	18	0	+	0	0	.
chr3	33002846	33002847	chr3:33002847:T:C	rs9828592	T	C	T	Sox2_MA0143.3	14	0	-	0	0	.
chr3	33046777	33046778	chr3:33046778:A:G	rs62250473	A	G	G	Sox2_MA0143.3	-12	0	+	0	0	.
chr3	33046779	33046780	chr3:33046780:A:G	rs62250474	A	G	A	Sox2_MA0143.3	-10	0	+	0	0	.
chr3	33046815	33046816	chr3:33046816:G:A	rs75970876	G	A	G	Sox2_MA0143.3	26	0	+	0	0	.
chr3	33231985	33231986	chr3:33231986:T:C	rs4678787	T	C	T	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr3	33391815	33391816	chr3:33391816:A:G	rs4678954	A	G	A	Sox2_MA0143.3	-3	0	+	0	0	.
chr3	33429153	33429154	chr3:33429154:A:G	rs7623887	A	G	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr3	33437876	33437877	chr3:33437877:G:A	rs116273184	G	A	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr3	33446467	33446468	chr3:33446468:C:T	rs113018542	C	T	C	Sox2_MA0143.3	12	0	+	0	0	.
chr3	33725512	33725513	chr3:33725513:A:C	rs9830766	A	C	C	Sox2_MA0143.3	4	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr3	33856405	33856406	chr3:33856406:A:G	rs9834071	A	G	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr3	33921908	33921909	chr3:33921909:G:A	rs72861543	G	A	G	Sox2_MA0143.3	15	0	-	0	0	.
chr3	33921935	33921936	chr3:33921936:G:T	rs9848590	G	T	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr3	33932334	33932335	chr3:33932335:G:A	rs13090094	G	A	G	Sox2_MA0143.3	21	0	+	0	0	.
chr3	33937151	33937152	chr3:33937152:A:C	rs7627371	A	C	C	Sox2_MA0143.3	7	1	+	3.5547341015215945	9.206767037375712	CCTTTGTA
chr3	33937152	33937153	chr3:33937153:T:C	rs566794638	T	C	T	Sox2_MA0143.3	8	0	+	0	0	.
chr3	34193459	34193460	chr3:34193460:T:C	rs72619966	T	C	T	Sox2_MA0143.3	-2	0	+	0	0	.
chr3	34208618	34208619	chr3:34208619:A:C	rs11714393	A	C	A	Sox2_MA0143.3	8	0	-	0	0	.
chr3	34263161	34263162	chr3:34263162:T:C	rs7432860	T	C	t	Sox2_MA0143.3	-19	0	-	0	0	.
chr3	34521224	34521225	chr3:34521225:T:C	rs12495509	T	C	C	Sox2_MA0143.3	23	0	+	0	0	.
chr3	34679456	34679457	chr3:34679457:G:A	rs13060690	G	A	G	Sox2_MA0143.3	11	0	+	0	0	.
chr3	34682772	34682773	chr3:34682773:A:G	rs1851058	A	G	A	Sox2_MA0143.3	-3	0	+	0	0	.
chr3	34803800	34803801	chr3:34803801:T:C	rs77679137	T	C	T	Sox2_MA0143.3	-8	0	+	0	0	.
chr3	34803801	34803802	chr3:34803802:G:A	rs60116723	G	A	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr3	34838322	34838323	chr3:34838323:A:G	rs1522972	A	G	G	Sox2_MA0143.3	2	1	+	9.613475778572903	3.494828071296623	CCATTGTT
chr3	34998121	34998122	chr3:34998122:C:T	rs1478846	C	T	C	Sox2_MA0143.3	18	0	+	0	0	.
chr3	35200467	35200468	chr3:35200468:A:G	rs59101793	A	G	A	Sox2_MA0143.3	2	1	-	9.206767037375712	2.900948058900136	CCTTTGTC
chr3	35492085	35492086	chr3:35492086:C:T	rs870776	C	T	T	Sox2_MA0143.3	23	0	-	0	0	.
chr3	35649658	35649659	chr3:35649659:G:A	rs12496573	G	A	G	Sox2_MA0143.3	19	0	-	0	0	.
chr3	35654468	35654469	chr3:35654469:C:T	rs11129660	C	T	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr3	35677354	35677355	chr3:35677355:G:T	rs4678793	G	T	T	Sox2_MA0143.3	-18	0	+	0	0	.
chr3	35709824	35709825	chr3:35709825:C:A	rs7636725	C	A	A	Sox2_MA0143.3	-17	0	+	0	0	.
chr3	35709864	35709865	chr3:35709865:C:T	rs35005052	C	T	C	Sox2_MA0143.3	23	0	+	0	0	.
chr3	35758449	35758450	chr3:35758450:C:T	rs6550369	C	T	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr3	35881896	35881897	chr3:35881897:C:T	rs75121047	C	T	C	Sox2_MA0143.3	18	0	+	0	0	.
chr3	35986488	35986489	chr3:35986489:T:A	rs4234251	T	A	A	Sox2_MA0143.3	-13	0	+	0	0	.
chr3	36193611	36193612	chr3:36193612:C:T	rs79051597	C	T	C	Sox2_MA0143.3	18	0	-	0	0	.
chr3	36373174	36373175	chr3:36373175:T:C	rs73052235	T	C	T	Sox2_MA0143.3	-1	0	-	0	0	.
chr3	36447125	36447126	chr3:36447126:G:A	rs4352335	G	A	G	Sox2_MA0143.3	24	0	-	0	0	.
chr3	36454021	36454022	chr3:36454022:T:C	rs149297088	T	C	T	Sox2_MA0143.3	22	0	+	0	0	.
chr3	36482713	36482714	chr3:36482714:C:T	rs1456074	C	T	T	Sox2_MA0143.3	26	0	-	0	0	.
chr3	36515232	36515233	chr3:36515233:T:C	rs6797696	T	C	C	Sox2_MA0143.3	2	1	-	9.613475778572903	3.494828071296623	CCATTGTT
chr3	36560575	36560576	chr3:36560576:T:C	rs570169988	T	C	T	Sox2_MA0143.3	10	0	+	0	0	.
chr3	36663075	36663076	chr3:36663076:T:G	rs17250081	T	G	T	Sox2_MA0143.3	22	0	-	0	0	.
chr3	36698571	36698572	chr3:36698572:A:G	rs74396071	A	G	A	Sox2_MA0143.3	3	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr3	36698847	36698848	chr3:36698848:T:C	rs7648091	T	C	C	Sox2_MA0143.3	6	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr3	36733153	36733154	chr3:36733154:C:T	rs1507878	C	T	C	Sox2_MA0143.3	24	0	+	0	0	.
chr3	36762502	36762503	chr3:36762503:T:C	rs4678550	T	C	T	Sox2_MA0143.3	20	0	-	0	0	.
chr3	36787166	36787167	chr3:36787167:T:C	rs4075977	T	C	C	Sox2_MA0143.3	24	0	+	0	0	.
chr3	36868980	36868981	chr3:36868981:T:C	rs144419684	T	C	T	Sox2_MA0143.3	-9	0	-	0	0	.
chr3	36937768	36937769	chr3:36937769:T:C	rs56231935	T	C	T	Sox2_MA0143.3	3	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr3	36991970	36991971	chr3:36991971:T:G	rs4647200	T	G	T	Sox2_MA0143.3	24	0	+	0	0	.
chr3	37160119	37160120	chr3:37160120:T:C	rs374951	T	C	T	Sox2_MA0143.3	24	0	-	0	0	.
chr3	37260790	37260791	chr3:37260791:A:G	rs11129754	A	G	A	Sox2_MA0143.3	12	0	+	0	0	.
chr3	37290804	37290805	chr3:37290805:G:A	rs79764532	G	A	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr3	37357681	37357682	chr3:37357682:T:G	rs12715296	T	G	G	Sox2_MA0143.3	15	0	+	0	0	.
chr3	37604704	37604705	chr3:37604705:G:A	rs10510695	G	A	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr3	37644423	37644424	chr3:37644424:A:G	rs76224068	A	G	A	Sox2_MA0143.3	3	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr3	37717245	37717246	chr3:37717246:A:G	rs1949647	A	G	G	Sox2_MA0143.3	26	0	-	0	0	.
chr3	37743238	37743239	chr3:37743239:G:T	rs7633317	G	T	T	Sox2_MA0143.3	-1	0	+	0	0	.
chr3	37865031	37865032	chr3:37865032:G:A	rs62241549	G	A	G	Sox2_MA0143.3	0	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr3	37893087	37893088	chr3:37893088:C:T	rs9851933	C	T	C	Sox2_MA0143.3	19	0	+	0	0	.
chr3	37926169	37926170	chr3:37926170:G:A	rs9868023	G	A	G	Sox2_MA0143.3	19	0	-	0	0	.
chr3	37969216	37969217	chr3:37969217:T:C	rs7372209	T	C	C	Sox2_MA0143.3	4	1	+	3.5547341015215945	-3.3540206777936254	CCTTTGTA
chr3	37982061	37982062	chr3:37982062:A:G	rs10095	A	G	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr3	38046254	38046255	chr3:38046255:T:C	rs7430231	T	C	T	Sox2_MA0143.3	20	0	+	0	0	.
chr3	38099714	38099715	chr3:38099715:T:G	rs4605495	T	G	T	Sox2_MA0143.3	-16	0	+	0	0	.
chr3	38099721	38099722	chr3:38099722:T:C	rs113378174	T	C	T	Sox2_MA0143.3	-9	0	+	0	0	.
chr3	38289676	38289677	chr3:38289677:C:A	rs13064437	C	A	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr3	38289685	38289686	chr3:38289686:G:A	rs9814316	G	A	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr3	38580541	38580542	chr3:38580542:C:A	rs184194917	C	A	C	Sox2_MA0143.3	18	0	-	0	0	.
chr3	38587150	38587151	chr3:38587151:A:G	rs11711097	A	G	A	Sox2_MA0143.3	3	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr3	38587169	38587170	chr3:38587170:C:A	rs7432532	C	A	A	Sox2_MA0143.3	-16	0	-	0	0	.
chr3	38725823	38725824	chr3:38725824:T:C	rs6801957	T	C	C	Sox2_MA0143.3	13	0	-	0	0	.
chr3	38738567	38738568	chr3:38738568:T:C	rs10428168	T	C	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr3	39108643	39108644	chr3:39108644:G:A	rs559017782	G	A	G	Sox2_MA0143.3	5	1	+	9.206767037375712	2.298012258060492	CCTTTGTC
chr3	39111083	39111084	chr3:39111084:C:G	rs7614000	C	G	C	Sox2_MA0143.3	17	0	-	0	0	.
chr3	39126791	39126792	chr3:39126792:T:C	rs811971	T	C	T	Sox2_MA0143.3	23	0	+	0	0	.
chr3	39168177	39168178	chr3:39168178:G:T	rs80033537	G	T	G	Sox2_MA0143.3	1	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr3	39249708	39249709	chr3:39249709:C:T	rs9883690	C	T	C	Sox2_MA0143.3	10	0	-	0	0	.
chr3	39252795	39252796	chr3:39252796:G:A	rs4676620	G	A	a	Sox2_MA0143.3	-17	0	-	0	0	.
chr3	39265670	39265671	chr3:39265671:G:A	rs3732378	G	A	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr3	39278298	39278299	chr3:39278299:C:T	rs56148316	C	T	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr3	39295367	39295368	chr3:39295368:G:A	rs72865940	G	A	g	Sox2_MA0143.3	1	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr3	39347114	39347115	chr3:39347115:C:T	rs2649759	C	T	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr3	39349340	39349341	chr3:39349341:C:T	rs1909561	C	T	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr3	39411280	39411281	chr3:39411281:A:G	rs1392192	A	G	A	Sox2_MA0143.3	9	0	+	0	0	.
chr3	39418577	39418578	chr3:39418578:A:G	rs9863474	A	G	a	Sox2_MA0143.3	-11	0	-	0	0	.
chr3	39467476	39467477	chr3:39467477:G:A	rs631312	G	A	A	Sox2_MA0143.3	21	0	+	0	0	.
chr3	39473831	39473832	chr3:39473832:G:T	rs112637160	G	T	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr3	39533557	39533558	chr3:39533558:G:A	rs1624647	G	A	A	Sox2_MA0143.3	20	0	-	0	0	.
chr3	39570536	39570537	chr3:39570537:C:G	rs670278	C	G	G	Sox2_MA0143.3	19	0	+	0	0	.
chr3	39639552	39639553	chr3:39639553:G:C	rs76903081	G	C	G	Sox2_MA0143.3	0	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr3	39644521	39644522	chr3:39644522:A:T	rs78908069	A	T	A	Sox2_MA0143.3	6	1	-	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr3	39971226	39971227	chr3:39971227:C:T	rs6599074	C	T	T	Sox2_MA0143.3	1	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr3	40087912	40087913	chr3:40087913:G:T	rs112131189	G	T	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr3	40202745	40202746	chr3:40202746:T:C	rs9833618	T	C	C	Sox2_MA0143.3	8	0	+	0	0	.
chr3	40210854	40210855	chr3:40210855:G:C	rs1799422	G	C	G	Sox2_MA0143.3	23	0	+	0	0	.
chr3	40230205	40230206	chr3:40230206:T:G	rs1317217	T	G	T	Sox2_MA0143.3	26	0	-	0	0	.
chr3	40238473	40238474	chr3:40238474:G:A	rs13080985	G	A	g	Sox2_MA0143.3	12	0	+	0	0	.
chr3	40358101	40358102	chr3:40358102:T:C	rs6599094	T	C	C	Sox2_MA0143.3	4	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr3	40613370	40613371	chr3:40613371:C:G	rs73065914	C	G	C	Sox2_MA0143.3	7	1	-	8.864090315184848	9.206767037375712	CCTTTGTG
chr3	40614599	40614600	chr3:40614600:C:T	rs6787140	C	T	T	Sox2_MA0143.3	25	0	+	0	0	.
chr3	40852906	40852907	chr3:40852907:T:C	rs17051505	T	C	T	Sox2_MA0143.3	18	0	-	0	0	.
chr3	40915498	40915499	chr3:40915499:G:A	rs72859817	G	A	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr3	40980380	40980381	chr3:40980381:A:G	rs4607084	A	G	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr3	40996125	40996126	chr3:40996126:T:C	rs11716816	T	C	T	Sox2_MA0143.3	-14	0	+	0	0	.
chr3	41127115	41127116	chr3:41127116:A:C	rs7621892	A	C	C	Sox2_MA0143.3	3	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr3	41129685	41129686	chr3:41129686:T:G	rs2371447	T	G	T	Sox2_MA0143.3	-9	0	-	0	0	.
chr3	41276691	41276692	chr3:41276692:C:T	rs114306805	C	T	C	Sox2_MA0143.3	7	1	-	8.864090315184848	3.5547341015215945	CCTTTGTG
chr3	41315426	41315427	chr3:41315427:G:A	rs9844069	G	A	G	Sox2_MA0143.3	16	0	-	0	0	.
chr3	41363011	41363012	chr3:41363012:T:C	rs58386850	T	C	T	Sox2_MA0143.3	-5	0	+	0	0	.
chr3	41486413	41486414	chr3:41486414:C:T	rs9845791	C	T	T	Sox2_MA0143.3	-20	0	-	0	0	.
chr3	41502054	41502055	chr3:41502055:C:T	rs2643979	C	T	C	Sox2_MA0143.3	0	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr3	41581961	41581962	chr3:41581962:A:C	rs186436481	A	C	A	Sox2_MA0143.3	-14	0	-	0	0	.
chr3	41592827	41592828	chr3:41592828:C:T	rs4973974	C	T	T	Sox2_MA0143.3	-20	0	+	0	0	.
chr3	41611094	41611095	chr3:41611095:A:G	rs35763235	A	G	A	Sox2_MA0143.3	3	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr3	41685042	41685043	chr3:41685043:T:C	rs75914604	T	C	T	Sox2_MA0143.3	-6	0	-	0	0	.
chr3	41840830	41840831	chr3:41840831:A:G	rs114960066	A	G	G	Sox2_MA0143.3	-2	0	+	0	0	.
chr3	41881581	41881582	chr3:41881582:A:G	rs1716683	A	G	A	Sox2_MA0143.3	-4	0	-	0	0	.
chr3	42026176	42026177	chr3:42026177:A:G	rs17219347	A	G	a	Sox2_MA0143.3	13	0	+	0	0	.
chr3	42032403	42032404	chr3:42032404:G:A	rs925170886	G	A	G	Sox2_MA0143.3	19	0	+	0	0	.
chr3	42063358	42063359	chr3:42063359:C:T	rs116401154	C	T	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr3	42067736	42067737	chr3:42067737:G:A	rs115880108	G	A	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr3	42073243	42073244	chr3:42073244:C:T	rs7651982	C	T	C	Sox2_MA0143.3	12	0	+	0	0	.
chr3	42098199	42098200	chr3:42098200:G:C	rs12054017	G	C	G	Sox2_MA0143.3	12	0	-	0	0	.
chr3	42106855	42106856	chr3:42106856:T:C	rs9867406	T	C	T	Sox2_MA0143.3	3	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr3	42193247	42193248	chr3:42193248:G:A	rs2290137	G	A	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr3	42201938	42201939	chr3:42201939:T:C	rs73831716	T	C	C	Sox2_MA0143.3	8	0	+	0	0	.
chr3	42229381	42229382	chr3:42229382:C:T	rs11919824	C	T	C	Sox2_MA0143.3	22	0	-	0	0	.
chr3	42246290	42246291	chr3:42246291:T:C	rs4645116	T	C	C	Sox2_MA0143.3	27	0	-	0	0	.
chr3	42263291	42263292	chr3:42263292:A:G	rs1868522	A	G	a	Sox2_MA0143.3	-9	0	-	0	0	.
chr3	42288425	42288426	chr3:42288426:G:C	rs9879537	G	C	G	Sox2_MA0143.3	25	0	+	0	0	.
chr3	42291131	42291132	chr3:42291132:T:G	rs9839267	T	G	G	Sox2_MA0143.3	6	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr3	42371988	42371989	chr3:42371989:A:G	rs33479	A	G	A	Sox2_MA0143.3	-17	0	-	0	0	.
chr3	42503773	42503774	chr3:42503774:A:G	rs485118	A	G	G	Sox2_MA0143.3	3	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr3	42602442	42602443	chr3:42602443:G:A	rs13100261	G	A	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr3	42660122	42660123	chr3:42660123:T:C	rs142476257	T	C	T	Sox2_MA0143.3	-14	0	-	0	0	.
chr3	42661158	42661159	chr3:42661159:C:T	rs1267327351	C	T	C	Sox2_MA0143.3	27	0	-	0	0	.
chr3	42691429	42691430	chr3:42691430:G:C	rs114013035	G	C	G	Sox2_MA0143.3	7	1	+	8.864090315184848	9.206767037375712	CCTTTGTG
chr3	42691446	42691447	chr3:42691447:A:G	rs73085372	A	G	G	Sox2_MA0143.3	24	0	+	0	0	.
chr3	42732469	42732470	chr3:42732470:C:T	rs12491179	C	T	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr3	42734745	42734746	chr3:42734746:C:T	rs145314011	C	T	C	Sox2_MA0143.3	0	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr3	42759285	42759286	chr3:42759286:G:A	rs339676	G	A	g	Sox2_MA0143.3	9	0	+	0	0	.
chr3	42803605	42803606	chr3:42803606:T:C	rs187275725	T	C	T	Sox2_MA0143.3	-17	0	+	0	0	.
chr3	42810714	42810715	chr3:42810715:C:T	rs13070029	C	T	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr3	42935552	42935553	chr3:42935553:T:C	rs577797629	T	C	T	Sox2_MA0143.3	27	0	-	0	0	.
chr3	43013815	43013816	chr3:43013816:G:A	rs567950345	G	A	G	Sox2_MA0143.3	1	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr3	43163664	43163665	chr3:43163665:G:A	rs7433963	G	A	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr3	43255942	43255943	chr3:43255943:G:A	rs4682675	G	A	G	Sox2_MA0143.3	17	0	+	0	0	.
chr3	43331135	43331136	chr3:43331136:C:G	rs6791641	C	G	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr3	43465208	43465209	chr3:43465209:T:A	rs6770540	T	A	A	Sox2_MA0143.3	18	0	-	0	0	.
chr3	43541826	43541827	chr3:43541827:T:C	rs7428158	T	C	T	Sox2_MA0143.3	27	0	-	0	0	.
chr3	43692897	43692898	chr3:43692898:A:C	rs12496760	A	C	A	Sox2_MA0143.3	25	0	-	0	0	.
chr3	43783309	43783310	chr3:43783310:G:C	rs731734	G	C	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr3	43863298	43863299	chr3:43863299:C:A	rs11706284	C	A	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr3	43951192	43951193	chr3:43951193:A:G	rs4682923	A	G	G	Sox2_MA0143.3	20	0	-	0	0	.
chr3	44027365	44027366	chr3:44027366:A:G	rs55815754	A	G	A	Sox2_MA0143.3	-18	0	+	0	0	.
chr3	44050226	44050227	chr3:44050227:T:G	rs6779293	T	G	G	Sox2_MA0143.3	17	0	-	0	0	.
chr3	44509798	44509799	chr3:44509799:C:T	rs142700122	C	T	c	Sox2_MA0143.3	24	0	-	0	0	.
chr3	44914000	44914001	chr3:44914001:T:A	rs150933983	T	A	T	Sox2_MA0143.3	4	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr3	44916632	44916633	chr3:44916633:A:G	rs3749193	A	G	A	Sox2_MA0143.3	-12	0	-	0	0	.
chr3	45012178	45012179	chr3:45012179:C:T	rs60431938	C	T	C	Sox2_MA0143.3	15	0	+	0	0	.
chr3	45042248	45042249	chr3:45042249:T:C	rs11924100	T	C	T	Sox2_MA0143.3	2	1	-	9.613475778572903	3.494828071296623	CCATTGTT
chr3	45190373	45190374	chr3:45190374:G:A	rs2195203	G	A	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr3	45220508	45220509	chr3:45220509:G:A	rs73829982	G	A	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr3	45226623	45226624	chr3:45226624:T:C	rs33751	T	C	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr3	45226632	45226633	chr3:45226633:A:T	rs77482578	A	T	A	Sox2_MA0143.3	-4	0	+	0	0	.
chr3	45226647	45226648	chr3:45226648:C:A	rs79505900	C	A	C	Sox2_MA0143.3	11	0	+	0	0	.
chr3	45227410	45227411	chr3:45227411:G:C	rs58168546	G	C	N	Sox2_MA0143.3	18	0	+	0	0	.
chr3	45346334	45346335	chr3:45346335:T:C	rs74388308	T	C	T	Sox2_MA0143.3	27	0	+	0	0	.
chr3	45387367	45387368	chr3:45387368:T:C	rs9874799	T	C	T	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr3	45473963	45473964	chr3:45473964:A:G	rs184149498	A	G	A	Sox2_MA0143.3	-8	0	+	0	0	.
chr3	45480065	45480066	chr3:45480066:T:C	rs376769334	T	C	T	Sox2_MA0143.3	16	0	-	0	0	.
chr3	45554952	45554953	chr3:45554953:C:T	rs17260680	C	T	C	Sox2_MA0143.3	11	0	+	0	0	.
chr3	45600688	45600689	chr3:45600689:C:A	rs59285107	C	A	C	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr3	45643038	45643039	chr3:45643039:A:T	rs115704198	A	T	A	Sox2_MA0143.3	-8	0	+	0	0	.
chr3	45665244	45665245	chr3:45665245:G:A	rs17078173	G	A	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr3	45667727	45667728	chr3:45667728:C:T	rs78788192	C	T	C	Sox2_MA0143.3	1	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr3	45763241	45763242	chr3:45763242:C:T	rs6770261	C	T	T	Sox2_MA0143.3	25	0	-	0	0	.
chr3	45776926	45776927	chr3:45776927:A:G	rs17078335	A	G	A	Sox2_MA0143.3	3	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr3	45799264	45799265	chr3:45799265:A:G	rs13100640	A	G	A	Sox2_MA0143.3	2	1	-	3.5547341015215945	-2.751084876953981	CCTTTGTA
chr3	45893095	45893096	chr3:45893096:T:C	rs9869542	T	C	T	Sox2_MA0143.3	-3	0	+	0	0	.
chr3	45939180	45939181	chr3:45939181:G:A	rs17078449	G	A	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr3	45968191	45968192	chr3:45968192:G:A	rs3733101	G	A	G	Sox2_MA0143.3	17	0	+	0	0	.
chr3	45983520	45983521	chr3:45983521:A:G	rs4683159	A	G	G	Sox2_MA0143.3	13	0	-	0	0	.
chr3	46031889	46031890	chr3:46031890:C:T	rs6763341	C	T	T	Sox2_MA0143.3	13	0	-	0	0	.
chr3	46048092	46048093	chr3:46048093:G:A	rs1024383094	G	A	g	Sox2_MA0143.3	27	0	-	0	0	.
chr3	46060606	46060607	chr3:46060607:A:C	rs7616464	A	C	A	Sox2_MA0143.3	7	1	+	3.5547341015215945	9.206767037375712	CCTTTGTA
chr3	46092472	46092473	chr3:46092473:T:G	rs1388602	T	G	T	Sox2_MA0143.3	19	0	+	0	0	.
chr3	46122380	46122381	chr3:46122381:A:G	rs6807578	A	G	a	Sox2_MA0143.3	-2	0	-	0	0	.
chr3	46181274	46181275	chr3:46181275:G:T	rs113297542	G	T	G	Sox2_MA0143.3	5	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr3	46183723	46183724	chr3:46183724:G:T	rs34340501	G	T	G	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr3	46188153	46188154	chr3:46188154:C:A	rs11929424	C	A	A	Sox2_MA0143.3	0	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr3	46313347	46313348	chr3:46313348:T:C	rs6441963	T	C	T	Sox2_MA0143.3	20	0	+	0	0	.
chr3	46413050	46413051	chr3:46413051:A:C	rs200150881	A	C	A	Sox2_MA0143.3	13	0	-	0	0	.
chr3	46418859	46418860	chr3:46418860:G:A	rs7623238	G	A	A	Sox2_MA0143.3	26	0	+	0	0	.
chr3	46421737	46421738	chr3:46421738:T:C	rs7624804	T	C	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr3	46428594	46428595	chr3:46428595:A:T	rs6441984	A	T	A	Sox2_MA0143.3	26	0	-	0	0	.
chr3	46444463	46444464	chr3:46444464:G:T	rs34940840	G	T	G	Sox2_MA0143.3	-16	0	-	0	0	.
chr3	46481164	46481165	chr3:46481165:A:G	rs7374925	A	G	T	Sox2_MA0143.3	17	0	+	0	0	.
chr3	46486849	46486850	chr3:46486850:C:T	rs67962987	C	T	C	Sox2_MA0143.3	7	1	-	8.864090315184848	3.5547341015215945	CCTTTGTG
chr3	46489194	46489195	chr3:46489195:C:T	rs28413725	C	T	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr3	46489233	46489234	chr3:46489234:G:C	rs4682818	G	C	G	Sox2_MA0143.3	27	0	+	0	0	.
chr3	46599167	46599168	chr3:46599168:C:A	rs4683246	C	A	C	Sox2_MA0143.3	7	1	-	8.864090315184848	9.800647049772198	CCTTTGTG
chr3	46603418	46603419	chr3:46603419:T:G	rs6799581	T	G	G	Sox2_MA0143.3	24	0	+	0	0	.
chr3	46612563	46612564	chr3:46612564:G:C	rs58551379	G	C	G	Sox2_MA0143.3	-3	0	+	0	0	.
chr3	46617485	46617486	chr3:46617486:G:A	rs143727922	G	A	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr3	46629981	46629982	chr3:46629982:G:C	rs114750818	G	C	G	Sox2_MA0143.3	7	1	-	9.206767037375712	8.864090315184848	CCTTTGTC
chr3	46817032	46817033	chr3:46817033:C:A	rs57986278	C	A	C	Sox2_MA0143.3	-12	0	-	0	0	.
chr3	46863681	46863682	chr3:46863682:T:C	rs142106468	T	C	T	Sox2_MA0143.3	-8	0	-	0	0	.
chr3	46864342	46864343	chr3:46864343:C:T	rs112451728	C	T	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr3	46970378	46970379	chr3:46970379:G:A	rs4522803	G	A	A	Sox2_MA0143.3	22	0	+	0	0	.
chr3	47013214	47013215	chr3:47013215:A:G	rs373777588	A	G	A	Sox2_MA0143.3	-9	0	+	0	0	.
chr3	47162826	47162827	chr3:47162827:T:C	rs188956160	T	C	T	Sox2_MA0143.3	-6	0	-	0	0	.
chr3	47282267	47282268	chr3:47282268:G:A	rs41290658	G	A	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr3	47413928	47413929	chr3:47413929:G:A	rs112830289	G	A	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr3	47781500	47781501	chr3:47781501:G:T	chr3:47781501:G:T	G	T	G	Sox2_MA0143.3	15	0	+	0	0	.
chr3	47781511	47781512	chr3:47781512:G:C	rs866841548	G	C	G	Sox2_MA0143.3	26	0	+	0	0	.
chr3	47803790	47803791	chr3:47803791:C:T	rs1173962307	C	T	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr3	48034188	48034189	chr3:48034189:T:C	rs1238123278	T	C	T	Sox2_MA0143.3	-11	0	+	0	0	.
chr3	48090086	48090087	chr3:48090087:T:C	rs7625572	T	C	T	Sox2_MA0143.3	2	1	+	3.5547341015215945	-2.751084876953981	CCTTTGTA
chr3	48268598	48268599	chr3:48268599:C:G	rs370843777	C	G	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr3	48268621	48268622	chr3:48268622:C:T	rs764977114	C	T	C	Sox2_MA0143.3	10	0	+	0	0	.
chr3	48284942	48284943	chr3:48284943:T:C	rs6801801	T	C	C	Sox2_MA0143.3	24	0	+	0	0	.
chr3	48300391	48300392	chr3:48300392:C:A	rs544727864	C	A	C	Sox2_MA0143.3	21	0	+	0	0	.
chr3	48393658	48393659	chr3:48393659:C:G	rs6770470	C	G	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr3	48413477	48413478	chr3:48413478:T:C	rs113323453	T	C	T	Sox2_MA0143.3	-10	0	+	0	0	.
chr3	48440225	48440226	chr3:48440226:T:A	rs1294599415	T	A	T	Sox2_MA0143.3	14	0	-	0	0	.
chr3	48440236	48440237	chr3:48440237:A:G	rs3774808	A	G	G	Sox2_MA0143.3	3	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr3	48445933	48445934	chr3:48445934:A:G	rs9876781	A	G	A	Sox2_MA0143.3	15	0	+	0	0	.
chr3	48445948	48445949	chr3:48445949:C:A	rs9838618	C	A	A	Sox2_MA0143.3	-17	0	+	0	0	.
chr3	48470380	48470381	chr3:48470381:C:T	rs185174870	C	T	C	Sox2_MA0143.3	16	0	+	0	0	.
chr3	48473669	48473670	chr3:48473670:C:T	rs4858795	C	T	C	Sox2_MA0143.3	23	0	-	0	0	.
chr3	48564243	48564244	chr3:48564244:G:A	rs545650545	G	A	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr3	48739418	48739419	chr3:48739419:G:A	rs956835878	G	A	G	Sox2_MA0143.3	18	0	+	0	0	.
chr3	48740508	48740509	chr3:48740509:T:A	chr3:48740509:T:A	T	A	T	Sox2_MA0143.3	15	0	+	0	0	.
chr3	48756992	48756993	chr3:48756993:G:A	rs114753576	G	A	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr3	48797811	48797812	chr3:48797812:G:A	rs149178804	G	A	G	Sox2_MA0143.3	13	0	-	0	0	.
chr3	48820841	48820842	chr3:48820842:C:T	rs542619511	C	T	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr3	48820868	48820869	chr3:48820869:G:C	rs114730095	G	C	G	Sox2_MA0143.3	15	0	+	0	0	.
chr3	48915629	48915630	chr3:48915630:T:C	rs115334814	T	C	t	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr3	49132393	49132394	chr3:49132394:C:T	rs149408554	C	T	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr3	49297334	49297335	chr3:49297335:G:A	rs3774800	G	A	A	Sox2_MA0143.3	-1	0	+	0	0	.
chr3	49349105	49349106	chr3:49349106:T:A	rs114918429	T	A	t	Sox2_MA0143.3	-13	0	-	0	0	.
chr3	49351909	49351910	chr3:49351910:G:A	chr3:49351910:G:A	G	A	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr3	49397758	49397759	chr3:49397759:G:C	rs141729768	G	C	G	Sox2_MA0143.3	27	0	-	0	0	.
chr3	49485376	49485377	chr3:49485377:T:C	rs765021264	T	C	T	Sox2_MA0143.3	20	0	+	0	0	.
chr3	49671713	49671714	chr3:49671714:A:T	rs71324984	A	T	A	Sox2_MA0143.3	3	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr3	49716817	49716818	chr3:49716818:G:C	chr3:49716818:G:C	G	C	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr3	49751709	49751710	chr3:49751710:T:C	rs983598579	T	C	T	Sox2_MA0143.3	-12	0	+	0	0	.
chr3	49785590	49785591	chr3:49785591:G:C	rs11920900	G	C	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr3	49856922	49856923	chr3:49856923:G:T	rs148067948	G	T	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr3	49865119	49865120	chr3:49865120:G:A	rs9859813	G	A	G	Sox2_MA0143.3	18	0	-	0	0	.
chr3	49876963	49876964	chr3:49876964:T:C	rs11712056	T	C	T	Sox2_MA0143.3	19	0	-	0	0	.
chr3	50050513	50050514	chr3:50050514:A:G	rs144406288	A	G	A	Sox2_MA0143.3	12	0	+	0	0	.
chr3	50162688	50162689	chr3:50162689:G:T	rs2518797	G	T	G	Sox2_MA0143.3	10	0	+	0	0	.
chr3	50168528	50168529	chr3:50168529:A:G	rs2624837	A	G	G	Sox2_MA0143.3	6	1	-	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr3	50191333	50191334	chr3:50191334:G:T	rs3755831	G	T	G	Sox2_MA0143.3	27	0	+	0	0	.
chr3	50321082	50321083	chr3:50321083:A:G	rs4688733	A	G	G	Sox2_MA0143.3	10	0	-	0	0	.
chr3	50323852	50323853	chr3:50323853:G:A	rs115961639	G	A	G	Sox2_MA0143.3	-12	0	+	0	0	.
chr3	50377188	50377189	chr3:50377189:T:C	rs58415636	T	C	T	Sox2_MA0143.3	15	0	+	0	0	.
chr3	50423749	50423750	chr3:50423750:A:G	rs56249615	A	G	A	Sox2_MA0143.3	-9	0	-	0	0	.
chr3	50526114	50526115	chr3:50526115:T:A	rs542632394	T	A	T	Sox2_MA0143.3	6	1	+	8.676919043985553	1.7681642646703326	CCATTGTG
chr3	50526118	50526119	chr3:50526119:C:A	rs561304557	C	A	C	Sox2_MA0143.3	10	0	+	0	0	.
chr3	50607726	50607727	chr3:50607727:A:G	rs2239753	A	G	A	Sox2_MA0143.3	19	0	-	0	0	.
chr3	50611840	50611841	chr3:50611841:G:A	chr3:50611841:G:A	G	A	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr3	50628115	50628116	chr3:50628116:C:A	rs149525535	C	A	C	Sox2_MA0143.3	18	0	+	0	0	.
chr3	51244070	51244071	chr3:51244071:G:A	rs75141540	G	A	G	Sox2_MA0143.3	18	0	+	0	0	.
chr3	51535310	51535311	chr3:51535311:A:C	rs72951466	A	C	A	Sox2_MA0143.3	-5	0	+	0	0	.
chr3	51582317	51582318	chr3:51582318:T:C	rs6806509	T	C	T	Sox2_MA0143.3	4	1	+	9.800647049772198	2.8918922704569785	CCTTTGTT
chr3	51898856	51898857	chr3:51898857:A:G	rs111906671	A	G	A	Sox2_MA0143.3	-3	0	-	0	0	.
chr3	51914689	51914690	chr3:51914690:C:G	rs323856	C	G	C	Sox2_MA0143.3	26	0	-	0	0	.
chr3	51984490	51984491	chr3:51984491:G:T	rs62259755	G	T	G	Sox2_MA0143.3	8	0	-	0	0	.
chr3	51984492	51984493	chr3:51984493:A:G	rs62259756	A	G	A	Sox2_MA0143.3	6	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr3	52069028	52069029	chr3:52069029:A:G	rs2878438	A	G	G	Sox2_MA0143.3	11	0	-	0	0	.
chr3	52091376	52091377	chr3:52091377:T:C	rs12493204	T	C	T	Sox2_MA0143.3	14	0	+	0	0	.
chr3	52132130	52132131	chr3:52132131:T:C	rs9809977	T	C	T	Sox2_MA0143.3	19	0	-	0	0	.
chr3	52265504	52265505	chr3:52265505:T:C	rs59612757	T	C	C	Sox2_MA0143.3	27	0	+	0	0	.
chr3	52473506	52473507	chr3:52473507:T:C	rs115479870	T	C	T	Sox2_MA0143.3	4	1	+	8.676919043985553	1.7681642646703322	CCATTGTG
chr3	52517248	52517249	chr3:52517249:T:C	rs66824127	T	C	T	Sox2_MA0143.3	13	0	-	0	0	.
chr3	52517267	52517268	chr3:52517268:G:T	rs67409736	G	T	T	Sox2_MA0143.3	-6	0	-	0	0	.
chr3	52529445	52529446	chr3:52529446:C:T	rs35371456	C	T	C	Sox2_MA0143.3	5	1	-	8.676919043985553	1.7681642646703324	CCATTGTG
chr3	52554623	52554624	chr3:52554624:G:A	rs4605534	G	A	G	Sox2_MA0143.3	9	0	-	0	0	.
chr3	52554638	52554639	chr3:52554639:G:A	rs2336142	G	A	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr3	52685680	52685681	chr3:52685681:G:A	rs797004062	G	A	G	Sox2_MA0143.3	14	0	-	0	0	.
chr3	52775492	52775493	chr3:52775493:G:A	rs72960288	G	A	G	Sox2_MA0143.3	23	0	-	0	0	.
chr3	52775508	52775509	chr3:52775509:T:C	rs2019065	T	C	C	Sox2_MA0143.3	7	1	-	3.5547341015215945	8.864090315184848	CCTTTGTA
chr3	52845630	52845631	chr3:52845631:G:A	rs78282976	G	A	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr3	52854468	52854469	chr3:52854469:C:T	rs9682464	C	T	C	Sox2_MA0143.3	-12	0	-	0	0	.
chr3	52880663	52880664	chr3:52880664:T:C	rs114402966	T	C	T	Sox2_MA0143.3	20	0	-	0	0	.
chr3	52958158	52958159	chr3:52958159:C:T	rs116706119	C	T	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr3	52982252	52982253	chr3:52982253:T:C	rs28793628	T	C	T	Sox2_MA0143.3	-9	0	+	0	0	.
chr3	53052217	53052218	chr3:53052218:C:T	rs12488768	C	T	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr3	53068712	53068713	chr3:53068713:C:T	chr3:53068713:C:T	C	T	C	Sox2_MA0143.3	5	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr3	53143309	53143310	chr3:53143310:C:T	rs28779773	C	T	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr3	53143325	53143326	chr3:53143326:T:C	rs551745764	T	C	T	Sox2_MA0143.3	3	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr3	53159531	53159532	chr3:53159532:G:T	rs13319192	G	T	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr3	53169668	53169669	chr3:53169669:C:T	rs576969512	C	T	C	Sox2_MA0143.3	0	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr3	53201090	53201091	chr3:53201091:G:T	rs114318431	G	T	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr3	53254458	53254459	chr3:53254459:G:A	rs13059189	G	A	G	Sox2_MA0143.3	17	0	-	0	0	.
chr3	53255104	53255105	chr3:53255105:C:T	rs140242124	C	T	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr3	53257965	53257966	chr3:53257966:G:A	rs7648309	G	A	G	Sox2_MA0143.3	13	0	-	0	0	.
chr3	53388118	53388119	chr3:53388119:G:T	rs4687727	G	T	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr3	53605271	53605272	chr3:53605272:C:T	rs3774474	C	T	c	Sox2_MA0143.3	18	0	+	0	0	.
chr3	53703547	53703548	chr3:53703548:C:T	rs3774531	C	T	c	Sox2_MA0143.3	11	0	+	0	0	.
chr3	53712178	53712179	chr3:53712179:G:C	rs10510765	G	C	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr3	53730372	53730373	chr3:53730373:G:A	rs142031219	G	A	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr3	53747007	53747008	chr3:53747008:T:A	rs2680670	T	A	A	Sox2_MA0143.3	18	0	+	0	0	.
chr3	53776206	53776207	chr3:53776207:T:C	rs75573425	T	C	T	Sox2_MA0143.3	-16	0	+	0	0	.
chr3	53778960	53778961	chr3:53778961:G:A	rs4687740	G	A	A	Sox2_MA0143.3	-3	0	+	0	0	.
chr3	53799370	53799371	chr3:53799371:A:G	rs3796348	A	G	G	Sox2_MA0143.3	10	0	-	0	0	.
chr3	54046213	54046214	chr3:54046214:G:A	rs66582803	G	A	G	Sox2_MA0143.3	24	0	-	0	0	.
chr3	54077379	54077380	chr3:54077380:G:A	rs563193312	G	A	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr3	54130282	54130283	chr3:54130283:T:C	rs75184747	T	C	T	Sox2_MA0143.3	3	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr3	54164458	54164459	chr3:54164459:T:A	rs75760408	T	A	T	Sox2_MA0143.3	-13	0	+	0	0	.
chr3	54211045	54211046	chr3:54211046:C:G	rs13095436	C	G	c	Sox2_MA0143.3	-13	0	+	0	0	.
chr3	54279142	54279143	chr3:54279143:A:G	rs4928030	A	G	G	Sox2_MA0143.3	16	0	+	0	0	.
chr3	54294545	54294546	chr3:54294546:G:A	rs55715726	G	A	G	Sox2_MA0143.3	5	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr3	54300541	54300542	chr3:54300542:T:C	rs57897895	T	C	C	Sox2_MA0143.3	3	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr3	54301914	54301915	chr3:54301915:A:G	rs56352534	A	G	G	Sox2_MA0143.3	25	0	+	0	0	.
chr3	54305059	54305060	chr3:54305060:G:A	rs7635568	G	A	G	Sox2_MA0143.3	19	0	-	0	0	.
chr3	54305090	54305091	chr3:54305091:T:C	rs7627905	T	C	C	Sox2_MA0143.3	-12	0	-	0	0	.
chr3	54320596	54320597	chr3:54320597:C:T	rs150510815	C	T	C	Sox2_MA0143.3	7	1	-	8.864090315184848	3.5547341015215945	CCTTTGTG
chr3	54433811	54433812	chr3:54433812:C:G	rs116099430	C	G	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr3	54437330	54437331	chr3:54437331:T:C	rs7428295	T	C	T	Sox2_MA0143.3	18	0	-	0	0	.
chr3	54568925	54568926	chr3:54568926:T:C	rs6806680	T	C	T	Sox2_MA0143.3	24	0	+	0	0	.
chr3	54621026	54621027	chr3:54621027:T:C	rs12497334	T	C	T	Sox2_MA0143.3	17	0	+	0	0	.
chr3	54691416	54691417	chr3:54691417:A:G	rs17054296	A	G	A	Sox2_MA0143.3	-4	0	-	0	0	.
chr3	54703790	54703791	chr3:54703791:A:G	rs62257066	A	G	A	Sox2_MA0143.3	6	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr3	54790461	54790462	chr3:54790462:C:G	rs2178564	C	G	G	Sox2_MA0143.3	7	1	-	8.676919043985553	9.019595766176417	CCATTGTG
chr3	54822390	54822391	chr3:54822391:C:A	rs114627007	C	A	C	Sox2_MA0143.3	5	1	-	9.613475778572903	2.7047209992576837	CCATTGTT
chr3	54873330	54873331	chr3:54873331:T:C	rs1168709	T	C	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr3	54889060	54889061	chr3:54889061:T:C	rs530860301	T	C	T	Sox2_MA0143.3	9	0	-	0	0	.
chr3	54931426	54931427	chr3:54931427:A:G	rs114143636	A	G	A	Sox2_MA0143.3	-18	0	-	0	0	.
chr3	54950357	54950358	chr3:54950358:G:A	rs1515954	G	A	A	Sox2_MA0143.3	-14	0	-	0	0	.
chr3	54990669	54990670	chr3:54990670:T:C	rs3821655	T	C	c	Sox2_MA0143.3	23	0	+	0	0	.
chr3	55009585	55009586	chr3:55009586:G:C	rs3773570	G	C	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr3	55107409	55107410	chr3:55107410:C:T	rs10049174	C	T	C	Sox2_MA0143.3	16	0	+	0	0	.
chr3	55143998	55143999	chr3:55143999:A:G	rs34092658	A	G	A	Sox2_MA0143.3	8	0	-	0	0	.
chr3	55151263	55151264	chr3:55151264:T:C	rs4955934	T	C	T	Sox2_MA0143.3	6	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr3	55166823	55166824	chr3:55166824:G:A	rs115289696	G	A	G	Sox2_MA0143.3	0	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr3	55166839	55166840	chr3:55166840:G:A	rs35729033	G	A	G	Sox2_MA0143.3	-16	0	-	0	0	.
chr3	55183800	55183801	chr3:55183801:A:C	rs7649309	A	C	C	Sox2_MA0143.3	9	0	-	0	0	.
chr3	55296352	55296353	chr3:55296353:A:G	rs58093156	A	G	A	Sox2_MA0143.3	-5	0	+	0	0	.
chr3	55357988	55357989	chr3:55357989:A:C	rs4955847	A	C	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr3	55358252	55358253	chr3:55358253:G:A	rs4955848	G	A	G	Sox2_MA0143.3	0	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr3	55464814	55464815	chr3:55464815:C:T	rs34538079	C	T	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr3	55557342	55557343	chr3:55557343:A:C	rs56219800	A	C	A	Sox2_MA0143.3	-7	0	-	0	0	.
chr3	55591343	55591344	chr3:55591344:A:G	rs9841705	A	G	A	Sox2_MA0143.3	17	0	+	0	0	.
chr3	55604673	55604674	chr3:55604674:G:C	rs77521636	G	C	G	Sox2_MA0143.3	0	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr3	55637196	55637197	chr3:55637197:A:C	rs865274	A	C	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr3	55668428	55668429	chr3:55668429:G:A	rs77544601	G	A	G	Sox2_MA0143.3	22	0	-	0	0	.
chr3	55706239	55706240	chr3:55706240:C:T	rs815432	C	T	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr3	55774173	55774174	chr3:55774174:T:C	rs1495368	T	C	T	Sox2_MA0143.3	22	0	-	0	0	.
chr3	55803047	55803048	chr3:55803048:T:C	rs6782276	T	C	C	Sox2_MA0143.3	15	0	+	0	0	.
chr3	55891362	55891363	chr3:55891363:C:T	rs7639013	C	T	C	Sox2_MA0143.3	11	0	+	0	0	.
chr3	55955909	55955910	chr3:55955910:G:A	rs11713317	G	A	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr3	55981896	55981897	chr3:55981897:G:A	rs1458063	G	A	A	Sox2_MA0143.3	5	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr3	56101710	56101711	chr3:56101711:G:A	rs17216545	G	A	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr3	56414125	56414126	chr3:56414126:C:A	rs6803727	C	A	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr3	56414134	56414135	chr3:56414135:C:T	rs11925715	C	T	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr3	56496680	56496681	chr3:56496681:A:G	rs2054989	A	G	G	Sox2_MA0143.3	2	1	+	9.613475778572903	3.494828071296623	CCATTGTT
chr3	56738750	56738751	chr3:56738751:A:G	rs150314448	A	G	A	Sox2_MA0143.3	21	0	-	0	0	.
chr3	56769486	56769487	chr3:56769487:C:T	rs758606179	C	T	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr3	56792147	56792148	chr3:56792148:T:G	rs6775220	T	G	t	Sox2_MA0143.3	24	0	-	0	0	.
chr3	56858508	56858509	chr3:56858509:C:T	rs7641104	C	T	T	Sox2_MA0143.3	-1	0	-	0	0	.
chr3	56858511	56858512	chr3:56858512:T:G	rs113760789	T	G	T	Sox2_MA0143.3	-4	0	-	0	0	.
chr3	56895342	56895343	chr3:56895343:A:G	rs79939729	A	G	A	Sox2_MA0143.3	-9	0	+	0	0	.
chr3	56896075	56896076	chr3:56896076:C:T	rs80110863	C	T	C	Sox2_MA0143.3	17	0	-	0	0	.
chr3	56908146	56908147	chr3:56908147:C:A	rs76480100	C	A	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr3	56924128	56924129	chr3:56924129:G:A	rs1338380000	G	A	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr3	56989873	56989874	chr3:56989874:C:T	rs114862814	C	T	C	Sox2_MA0143.3	15	0	+	0	0	.
chr3	56992323	56992324	chr3:56992324:G:T	chr3:56992324:G:T	G	T	G	Sox2_MA0143.3	27	0	-	0	0	.
chr3	57060557	57060558	chr3:57060558:C:A	rs145974923	C	A	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr3	57077262	57077263	chr3:57077263:G:T	rs1488119	G	T	G	Sox2_MA0143.3	21	0	-	0	0	.
chr3	57099109	57099110	chr3:57099110:G:A	rs6809523	G	A	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr3	57160397	57160398	chr3:57160398:G:T	rs76181146	G	T	G	Sox2_MA0143.3	20	0	+	0	0	.
chr3	57338725	57338726	chr3:57338726:C:T	rs151090243	C	T	c	Sox2_MA0143.3	-17	0	+	0	0	.
chr3	57366487	57366488	chr3:57366488:G:T	rs894201119	G	T	G	Sox2_MA0143.3	21	0	-	0	0	.
chr3	57420809	57420810	chr3:57420810:G:A	rs9877290	G	A	G	Sox2_MA0143.3	14	0	-	0	0	.
chr3	57596902	57596903	chr3:57596903:G:A	rs9877985	G	A	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr3	57805840	57805841	chr3:57805841:C:A	rs73834739	C	A	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr3	57956295	57956296	chr3:57956296:A:G	rs139922357	A	G	a	Sox2_MA0143.3	-5	0	-	0	0	.
chr3	57959195	57959196	chr3:57959196:C:T	rs546535628	C	T	C	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr3	57970336	57970337	chr3:57970337:G:A	rs79680144	G	A	G	Sox2_MA0143.3	13	0	-	0	0	.
chr3	57972510	57972511	chr3:57972511:A:C	rs4681768	A	C	A	Sox2_MA0143.3	25	0	-	0	0	.
chr3	57972537	57972538	chr3:57972538:T:C	rs4681769	T	C	T	Sox2_MA0143.3	-2	0	-	0	0	.
chr3	58011269	58011270	chr3:58011270:T:A	rs151011756	T	A	T	Sox2_MA0143.3	14	0	+	0	0	.
chr3	58035146	58035147	chr3:58035147:C:T	rs9681051	C	T	C	Sox2_MA0143.3	16	0	+	0	0	.
chr3	58052461	58052462	chr3:58052462:G:A	rs188600512	G	A	G	Sox2_MA0143.3	0	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr3	58052471	58052472	chr3:58052472:G:T	rs13321311	G	T	T	Sox2_MA0143.3	-10	0	-	0	0	.
chr3	58162335	58162336	chr3:58162336:G:A	rs73075934	G	A	g	Sox2_MA0143.3	14	0	-	0	0	.
chr3	58168156	58168157	chr3:58168157:A:C	rs77130366	A	C	A	Sox2_MA0143.3	4	1	-	8.676919043985553	1.7681642646703322	CCATTGTG
chr3	58222460	58222461	chr3:58222461:A:G	rs9844002	A	G	G	Sox2_MA0143.3	8	0	-	0	0	.
chr3	58232868	58232869	chr3:58232869:A:G	rs4342080	A	G	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr3	58259927	58259928	chr3:58259928:C:T	rs9848073	C	T	T	Sox2_MA0143.3	-19	0	+	0	0	.
chr3	58296480	58296481	chr3:58296481:C:A	rs570401617	C	A	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr3	58419703	58419704	chr3:58419704:A:G	rs11714807	A	G	G	Sox2_MA0143.3	7	1	-	9.613475778572903	9.019595766176417	CCATTGTT
chr3	58422109	58422110	chr3:58422110:T:C	rs9822328	T	C	T	Sox2_MA0143.3	17	0	+	0	0	.
chr3	58424035	58424036	chr3:58424036:C:T	rs12485999	C	T	T	Sox2_MA0143.3	-7	0	-	0	0	.
chr3	58440778	58440779	chr3:58440779:T:C	rs6807289	T	C	T	Sox2_MA0143.3	-18	0	-	0	0	.
chr3	58440780	58440781	chr3:58440781:T:C	rs73837621	T	C	T	Sox2_MA0143.3	-20	0	-	0	0	.
chr3	58471902	58471903	chr3:58471903:G:T	rs9876744	G	T	G	Sox2_MA0143.3	17	0	+	0	0	.
chr3	58557784	58557785	chr3:58557785:G:A	rs12488633	G	A	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr3	58603685	58603686	chr3:58603686:A:G	rs73076206	A	G	A	Sox2_MA0143.3	-10	0	-	0	0	.
chr3	58829842	58829843	chr3:58829843:C:T	rs58328499	C	T	C	Sox2_MA0143.3	0	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr3	59056781	59056782	chr3:59056782:A:C	chr3:59056782:A:C	A	C	A	Sox2_MA0143.3	27	0	+	0	0	.
chr3	59126789	59126790	chr3:59126790:A:C	rs12485713	A	C	C	Sox2_MA0143.3	10	0	-	0	0	.
chr3	59192465	59192466	chr3:59192466:C:G	rs1512827	C	G	G	Sox2_MA0143.3	24	0	+	0	0	.
chr3	59252113	59252114	chr3:59252114:C:T	rs80070016	C	T	C	Sox2_MA0143.3	13	0	-	0	0	.
chr3	59333943	59333944	chr3:59333944:G:A	rs1443932	G	A	G	Sox2_MA0143.3	-5	0	+	0	0	.
chr3	59333971	59333972	chr3:59333972:T:C	rs1838281	T	C	C	Sox2_MA0143.3	23	0	+	0	0	.
chr3	59385247	59385248	chr3:59385248:C:T	rs992303846	C	T	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr3	59438802	59438803	chr3:59438803:A:C	rs67823438	A	C	A	Sox2_MA0143.3	24	0	-	0	0	.
chr3	59451935	59451936	chr3:59451936:T:C	rs17060718	T	C	T	Sox2_MA0143.3	-11	0	-	0	0	.
chr3	59544310	59544311	chr3:59544311:G:A	rs13098383	G	A	G	Sox2_MA0143.3	0	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr3	59610334	59610335	chr3:59610335:T:C	rs1869887	T	C	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr3	59762175	59762176	chr3:59762176:C:G	rs481165	C	G	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr3	59770637	59770638	chr3:59770638:A:G	rs4679606	A	G	A	Sox2_MA0143.3	-11	0	+	0	0	.
chr3	59777083	59777084	chr3:59777084:T:C	rs780369	T	C	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr3	59882792	59882793	chr3:59882793:T:A	rs1016531452	T	A	T	Sox2_MA0143.3	-8	0	+	0	0	.
chr3	59994751	59994752	chr3:59994752:C:T	rs11708751	C	T	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr3	60015740	60015741	chr3:60015741:G:A	rs78206668	G	A	A	Sox2_MA0143.3	26	0	-	0	0	.
chr3	60048086	60048087	chr3:60048087:C:T	rs552877318	C	T	C	Sox2_MA0143.3	1	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr3	60065573	60065574	chr3:60065574:C:T	rs4024131	C	T	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr3	60078569	60078570	chr3:60078570:G:A	rs13070338	G	A	G	Sox2_MA0143.3	21	0	-	0	0	.
chr3	60208171	60208172	chr3:60208172:G:A	rs213319	G	A	G	Sox2_MA0143.3	1	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr3	60276781	60276782	chr3:60276782:G:A	rs9835376	G	A	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr3	60324022	60324023	chr3:60324023:T:C	rs1569348	T	C	T	Sox2_MA0143.3	3	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr3	60446129	60446130	chr3:60446130:G:C	rs77063016	G	C	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr3	60488127	60488128	chr3:60488128:A:C	rs72882107	A	C	A	Sox2_MA0143.3	-16	0	+	0	0	.
chr3	60490924	60490925	chr3:60490925:G:C	rs12330869	G	C	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr3	60513153	60513154	chr3:60513154:G:T	rs2611403	G	T	T	Sox2_MA0143.3	15	0	-	0	0	.
chr3	60543080	60543081	chr3:60543081:A:G	rs2121854	A	G	G	Sox2_MA0143.3	3	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr3	60555592	60555593	chr3:60555593:C:T	chr3:60555593:C:T	C	T	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr3	60588035	60588036	chr3:60588036:A:C	rs9826800	A	C	C	Sox2_MA0143.3	6	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr3	60630419	60630420	chr3:60630420:T:C	rs6762641	T	C	T	Sox2_MA0143.3	-17	0	-	0	0	.
chr3	60721520	60721521	chr3:60721521:G:T	rs17063868	G	T	G	Sox2_MA0143.3	1	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr3	60772651	60772652	chr3:60772652:A:C	rs9842721	A	C	C	Sox2_MA0143.3	25	0	+	0	0	.
chr3	60934872	60934873	chr3:60934873:T:C	rs7622298	T	C	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr3	60934880	60934881	chr3:60934881:C:A	rs7652906	C	A	A	Sox2_MA0143.3	-11	0	-	0	0	.
chr3	60947423	60947424	chr3:60947424:A:T	rs73100064	A	T	A	Sox2_MA0143.3	6	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr3	61055032	61055033	chr3:61055033:G:T	rs10510858	G	T	T	Sox2_MA0143.3	-20	0	+	0	0	.
chr3	61493632	61493633	chr3:61493633:T:G	rs7430419	T	G	T	Sox2_MA0143.3	10	0	+	0	0	.
chr3	61522271	61522272	chr3:61522272:G:A	rs76403347	G	A	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr3	61547780	61547781	chr3:61547781:C:T	rs62243004	C	T	T	Sox2_MA0143.3	23	0	+	0	0	.
chr3	61575299	61575300	chr3:61575300:A:G	rs140607293	A	G	A	Sox2_MA0143.3	-10	0	-	0	0	.
chr3	61664487	61664488	chr3:61664488:T:C	rs78982896	T	C	T	Sox2_MA0143.3	-4	0	+	0	0	.
chr3	61684237	61684238	chr3:61684238:A:G	rs4688267	A	G	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr3	61684271	61684272	chr3:61684272:T:C	rs74491935	T	C	C	Sox2_MA0143.3	18	0	+	0	0	.
chr3	61690138	61690139	chr3:61690139:C:T	rs114262714	C	T	C	Sox2_MA0143.3	14	0	-	0	0	.
chr3	61725481	61725482	chr3:61725482:C:T	rs1608147	C	T	T	Sox2_MA0143.3	-11	0	+	0	0	.
chr3	61748864	61748865	chr3:61748865:T:C	rs3821880	T	C	C	Sox2_MA0143.3	21	0	+	0	0	.
chr3	61807926	61807927	chr3:61807927:G:C	rs115659506	G	C	G	Sox2_MA0143.3	12	0	-	0	0	.
chr3	61807943	61807944	chr3:61807944:C:A	rs17065421	C	A	A	Sox2_MA0143.3	-5	0	-	0	0	.
chr3	61861504	61861505	chr3:61861505:G:A	rs12630640	G	A	G	Sox2_MA0143.3	22	0	+	0	0	.
chr3	61877457	61877458	chr3:61877458:A:G	rs76254170	A	G	A	Sox2_MA0143.3	-6	0	-	0	0	.
chr3	61877462	61877463	chr3:61877463:T:G	rs573603732	T	G	T	Sox2_MA0143.3	-11	0	-	0	0	.
chr3	61966735	61966736	chr3:61966736:G:A	rs1479393	G	A	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr3	62051963	62051964	chr3:62051964:C:T	rs6810180	C	T	C	Sox2_MA0143.3	15	0	+	0	0	.
chr3	62067154	62067155	chr3:62067155:G:T	rs168371	G	T	T	Sox2_MA0143.3	0	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr3	62174070	62174071	chr3:62174071:C:T	rs17066234	C	T	T	Sox2_MA0143.3	10	0	+	0	0	.
chr3	62453910	62453911	chr3:62453911:T:C	rs1997366	T	C	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr3	62710970	62710971	chr3:62710971:G:C	rs4688141	G	C	G	Sox2_MA0143.3	10	0	+	0	0	.
chr3	62729375	62729376	chr3:62729376:C:G	rs34576248	C	G	C	Sox2_MA0143.3	14	0	-	0	0	.
chr3	62729404	62729405	chr3:62729405:G:C	rs499660	G	C	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr3	62874530	62874531	chr3:62874531:A:G	rs140896848	A	G	G	Sox2_MA0143.3	9	0	+	0	0	.
chr3	63057008	63057009	chr3:63057009:G:C	rs13065066	G	C	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr3	63057315	63057316	chr3:63057316:G:A	rs72889460	G	A	G	Sox2_MA0143.3	9	0	+	0	0	.
chr3	63086883	63086884	chr3:63086884:T:C	rs7637280	T	C	T	Sox2_MA0143.3	13	0	+	0	0	.
chr3	63343107	63343108	chr3:63343108:C:G	rs11719344	C	G	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr3	63343359	63343360	chr3:63343360:A:T	rs6806142	A	T	T	Sox2_MA0143.3	-20	0	-	0	0	.
chr3	63656770	63656771	chr3:63656771:G:A	rs76904715	G	A	G	Sox2_MA0143.3	-3	0	-	0	0	.
chr3	63939279	63939280	chr3:63939280:A:G	rs17069507	A	G	A	Sox2_MA0143.3	16	0	+	0	0	.
chr3	63970780	63970781	chr3:63970781:C:T	rs116756680	C	T	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr3	63996405	63996406	chr3:63996406:G:A	rs3774729	G	A	A	Sox2_MA0143.3	-18	0	-	0	0	.
chr3	64027726	64027727	chr3:64027727:C:G	rs556028474	C	G	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr3	64027740	64027741	chr3:64027741:G:A	rs35839	G	A	G	Sox2_MA0143.3	5	1	+	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr3	64084711	64084712	chr3:64084712:A:G	rs149116856	A	G	A	Sox2_MA0143.3	16	0	-	0	0	.
chr3	64157601	64157602	chr3:64157602:C:T	rs2111684	C	T	C	Sox2_MA0143.3	5	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr3	64160082	64160083	chr3:64160083:T:C	rs2306380	T	C	T	Sox2_MA0143.3	15	0	-	0	0	.
chr3	64170483	64170484	chr3:64170484:G:T	rs73124864	G	T	G	Sox2_MA0143.3	5	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr3	64176755	64176756	chr3:64176756:A:G	rs35422561	A	G	A	Sox2_MA0143.3	9	0	-	0	0	.
chr3	64176767	64176768	chr3:64176768:G:A	rs153736	G	A	A	Sox2_MA0143.3	-3	0	-	0	0	.
chr3	64204374	64204375	chr3:64204375:A:T	rs1679335	A	T	A	Sox2_MA0143.3	9	0	-	0	0	.
chr3	64204375	64204376	chr3:64204376:A:G	rs1676390	A	G	A	Sox2_MA0143.3	8	0	-	0	0	.
chr3	64230236	64230237	chr3:64230237:G:A	rs697293	G	A	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr3	64344613	64344614	chr3:64344614:T:C	rs853250	T	C	C	Sox2_MA0143.3	21	0	-	0	0	.
chr3	64456985	64456986	chr3:64456986:A:G	rs11917718	A	G	A	Sox2_MA0143.3	-7	0	+	0	0	.
chr3	64456986	64456987	chr3:64456987:A:G	rs1443523	A	G	A	Sox2_MA0143.3	-6	0	+	0	0	.
chr3	64457841	64457842	chr3:64457842:C:T	rs7651603	C	T	T	Sox2_MA0143.3	-9	0	+	0	0	.
chr3	64470057	64470058	chr3:64470058:C:T	rs73118112	C	T	C	Sox2_MA0143.3	13	0	+	0	0	.
chr3	64492474	64492475	chr3:64492475:C:G	rs4371511	C	G	G	Sox2_MA0143.3	10	0	-	0	0	.
chr3	64501837	64501838	chr3:64501838:C:T	rs58960132	C	T	T	Sox2_MA0143.3	-17	0	-	0	0	.
chr3	64505564	64505565	chr3:64505565:C:T	rs117793630	C	T	C	Sox2_MA0143.3	8	0	-	0	0	.
chr3	64641640	64641641	chr3:64641641:T:A	rs9851856	T	A	T	Sox2_MA0143.3	8	0	-	0	0	.
chr3	64642708	64642709	chr3:64642709:G:A	rs147555459	G	A	G	Sox2_MA0143.3	23	0	+	0	0	.
chr3	64684555	64684556	chr3:64684556:C:T	rs116703588	C	T	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr3	64686609	64686610	chr3:64686610:G:A	rs34774892	G	A	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr3	64727267	64727268	chr3:64727268:C:A	rs1862304	C	A	C	Sox2_MA0143.3	7	1	+	9.019595766176417	3.3675628303222993	CCATTGTC
chr3	64891101	64891102	chr3:64891102:T:C	rs813800	T	C	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr3	64929302	64929303	chr3:64929303:G:A	rs6806742	G	A	G	Sox2_MA0143.3	20	0	+	0	0	.
chr3	64944140	64944141	chr3:64944141:G:A	rs144740809	G	A	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr3	64955470	64955471	chr3:64955471:T:C	rs17071877	T	C	T	Sox2_MA0143.3	8	0	+	0	0	.
chr3	64977014	64977015	chr3:64977015:A:G	rs1878634	A	G	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr3	64996557	64996558	chr3:64996558:C:A	rs28437393	C	A	c	Sox2_MA0143.3	-11	0	-	0	0	.
chr3	65006707	65006708	chr3:65006708:C:A	rs57447166	C	A	C	Sox2_MA0143.3	11	0	-	0	0	.
chr3	65039829	65039830	chr3:65039830:A:G	rs183604846	A	G	A	Sox2_MA0143.3	-9	0	+	0	0	.
chr3	65071058	65071059	chr3:65071059:C:G	rs56826647	C	G	C	Sox2_MA0143.3	1	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr3	65166750	65166751	chr3:65166751:T:C	rs3919910	T	C	T	Sox2_MA0143.3	15	0	-	0	0	.
chr3	65178660	65178661	chr3:65178661:C:G	rs58392095	C	G	C	Sox2_MA0143.3	23	0	+	0	0	.
chr3	65265667	65265668	chr3:65265668:A:C	chr3:65265668:A:C	A	C	A	Sox2_MA0143.3	2	1	-	8.864090315184848	2.5582713367092715	CCTTTGTG
chr3	65408495	65408496	chr3:65408496:A:G	rs9876177	A	G	G	Sox2_MA0143.3	6	1	-	8.676919043985553	1.7681642646703326	CCATTGTG
chr3	65424321	65424322	chr3:65424322:T:A	rs34663554	T	A	T	Sox2_MA0143.3	10	0	+	0	0	.
chr3	65479036	65479037	chr3:65479037:C:T	rs73115943	C	T	C	Sox2_MA0143.3	12	0	-	0	0	.
chr3	65480084	65480085	chr3:65480085:T:A	rs9817894	T	A	T	Sox2_MA0143.3	-19	0	+	0	0	.
chr3	65480090	65480091	chr3:65480091:T:C	rs2030732	T	C	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr3	65577354	65577355	chr3:65577355:C:A	rs62253366	C	A	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr3	65636931	65636932	chr3:65636932:G:T	rs79268863	G	T	G	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr3	65751604	65751605	chr3:65751605:A:G	rs79881621	A	G	A	Sox2_MA0143.3	17	0	-	0	0	.
chr3	65816331	65816332	chr3:65816332:C:T	rs529381341	C	T	C	Sox2_MA0143.3	26	0	-	0	0	.
chr3	65883752	65883753	chr3:65883753:T:C	rs77660079	T	C	T	Sox2_MA0143.3	27	0	-	0	0	.
chr3	65883767	65883768	chr3:65883768:G:C	rs36016219	G	C	G	Sox2_MA0143.3	12	0	-	0	0	.
chr3	65928268	65928269	chr3:65928269:G:A	rs1011141997	G	A	G	Sox2_MA0143.3	17	0	-	0	0	.
chr3	65928293	65928294	chr3:65928294:C:T	rs60122748	C	T	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr3	65929146	65929147	chr3:65929147:A:C	rs264681	A	C	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr3	66017479	66017480	chr3:66017480:G:A	rs73833346	G	A	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr3	66075375	66075376	chr3:66075376:C:A	rs149659795	C	A	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr3	66151187	66151188	chr3:66151188:G:A	rs28493255	G	A	A	Sox2_MA0143.3	-7	0	+	0	0	.
chr3	66151209	66151210	chr3:66151210:T:C	rs62246869	T	C	T	Sox2_MA0143.3	15	0	+	0	0	.
chr3	66236406	66236407	chr3:66236407:G:T	rs188291587	G	T	G	Sox2_MA0143.3	7	1	+	8.864090315184848	9.800647049772198	CCTTTGTG
chr3	66236407	66236408	chr3:66236408:C:G	rs180760147	C	G	C	Sox2_MA0143.3	8	0	+	0	0	.
chr3	66236409	66236410	chr3:66236410:G:A	rs1404438093	G	A	G	Sox2_MA0143.3	10	0	+	0	0	.
chr3	66307410	66307411	chr3:66307411:G:A	rs80207165	G	A	g	Sox2_MA0143.3	5	1	+	9.206767037375712	2.298012258060492	CCTTTGTC
chr3	66320523	66320524	chr3:66320524:G:T	rs9819873	G	T	G	Sox2_MA0143.3	25	0	-	0	0	.
chr3	66324562	66324563	chr3:66324563:A:G	rs12496639	A	G	A	Sox2_MA0143.3	-3	0	-	0	0	.
chr3	66371732	66371733	chr3:66371733:A:T	rs7631234	A	T	A	Sox2_MA0143.3	19	0	-	0	0	.
chr3	66387531	66387532	chr3:66387532:A:G	rs332367	A	G	A	Sox2_MA0143.3	14	0	+	0	0	.
chr3	66492776	66492777	chr3:66492777:G:A	rs3856602	G	A	G	Sox2_MA0143.3	8	0	-	0	0	.
chr3	66521028	66521029	chr3:66521029:T:A	rs6549175	T	A	T	Sox2_MA0143.3	11	0	-	0	0	.
chr3	66576934	66576935	chr3:66576935:G:A	rs885354	G	A	G	Sox2_MA0143.3	24	0	-	0	0	.
chr3	66671649	66671650	chr3:66671650:A:G	rs13322622	A	G	A	Sox2_MA0143.3	13	0	+	0	0	.
chr3	66673258	66673259	chr3:66673259:C:T	rs35103002	C	T	C	Sox2_MA0143.3	5	1	-	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr3	66692732	66692733	chr3:66692733:G:A	rs11717234	G	A	A	Sox2_MA0143.3	24	0	-	0	0	.
chr3	66699735	66699736	chr3:66699736:A:G	rs7621944	A	G	A	Sox2_MA0143.3	25	0	+	0	0	.
chr3	66930657	66930658	chr3:66930658:A:G	rs10446400	A	G	A	Sox2_MA0143.3	15	0	-	0	0	.
chr3	67296253	67296254	chr3:67296254:G:A	rs77242355	G	A	G	Sox2_MA0143.3	20	0	-	0	0	.
chr3	67302841	67302842	chr3:67302842:G:C	rs13325134	G	C	G	Sox2_MA0143.3	0	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr3	67648946	67648947	chr3:67648947:A:G	rs935734	A	G	A	Sox2_MA0143.3	16	0	+	0	0	.
chr3	67655773	67655774	chr3:67655774:C:G	rs184688018	C	G	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr3	67704577	67704578	chr3:67704578:G:T	chr3:67704578:G:T	G	T	G	Sox2_MA0143.3	18	0	+	0	0	.
chr3	67901882	67901883	chr3:67901883:C:T	rs1868185	C	T	T	Sox2_MA0143.3	-17	0	+	0	0	.
chr3	68057885	68057886	chr3:68057886:A:G	rs190792991	A	G	A	Sox2_MA0143.3	8	0	-	0	0	.
chr3	68208236	68208237	chr3:68208237:A:G	rs17827563	A	G	A	Sox2_MA0143.3	-18	0	+	0	0	.
chr3	68256852	68256853	chr3:68256853:G:T	rs75466708	G	T	G	Sox2_MA0143.3	5	1	+	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr3	68272083	68272084	chr3:68272084:C:A	rs9869700	C	A	A	Sox2_MA0143.3	0	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr3	68520572	68520573	chr3:68520573:T:C	rs1039972	T	C	T	Sox2_MA0143.3	-7	0	+	0	0	.
chr3	68615706	68615707	chr3:68615707:T:C	rs73100719	T	C	T	Sox2_MA0143.3	17	0	+	0	0	.
chr3	68707360	68707361	chr3:68707361:G:A	rs71312524	G	A	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr3	69070834	69070835	chr3:69070835:G:A	rs113054348	G	A	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr3	69085238	69085239	chr3:69085239:C:T	chr3:69085239:C:T	C	T	C	Sox2_MA0143.3	25	0	+	0	0	.
chr3	69085759	69085760	chr3:69085760:C:T	chr3:69085760:C:T	C	T	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr3	69088387	69088388	chr3:69088388:T:C	rs3853159	T	C	T	Sox2_MA0143.3	2	1	-	9.613475778572903	3.494828071296623	CCATTGTT
chr3	69248604	69248605	chr3:69248605:A:G	rs77903959	A	G	A	Sox2_MA0143.3	-6	0	-	0	0	.
chr3	69248617	69248618	chr3:69248618:T:C	rs185375448	T	C	T	Sox2_MA0143.3	-19	0	-	0	0	.
chr3	69252927	69252928	chr3:69252928:C:G	chr3:69252928:C:G	C	G	C	Sox2_MA0143.3	5	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr3	69289121	69289122	chr3:69289122:C:T	rs144415053	C	T	C	Sox2_MA0143.3	5	1	-	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr3	69352346	69352347	chr3:69352347:G:A	rs17350402	G	A	G	Sox2_MA0143.3	7	1	-	9.019595766176417	9.613475778572903	CCATTGTC
chr3	69360111	69360112	chr3:69360112:C:T	rs1976064	C	T	C	Sox2_MA0143.3	1	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr3	69368353	69368354	chr3:69368354:A:G	rs58937767	A	G	A	Sox2_MA0143.3	-9	0	-	0	0	.
chr3	69391699	69391700	chr3:69391700:C:T	rs7648449	C	T	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr3	69391702	69391703	chr3:69391703:C:T	rs1843052	C	T	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr3	69406262	69406263	chr3:69406263:C:T	rs17005844	C	T	C	Sox2_MA0143.3	16	0	-	0	0	.
chr3	69421026	69421027	chr3:69421027:C:T	rs61608256	C	T	C	Sox2_MA0143.3	11	0	+	0	0	.
chr3	69434226	69434227	chr3:69434227:A:G	rs9814003	A	G	A	Sox2_MA0143.3	-4	0	-	0	0	.
chr3	69460310	69460311	chr3:69460311:A:G	rs115139555	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr3	69532844	69532845	chr3:69532845:G:A	rs17006072	G	A	G	Sox2_MA0143.3	20	0	+	0	0	.
chr3	69559122	69559123	chr3:69559123:T:C	chr3:69559123:T:C	T	C	T	Sox2_MA0143.3	-20	0	-	0	0	.
chr3	69647729	69647730	chr3:69647730:T:C	rs9310168	T	C	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr3	69647754	69647755	chr3:69647755:G:A	rs9310169	G	A	G	Sox2_MA0143.3	5	1	+	9.019595766176417	2.110840986861197	CCATTGTC
chr3	69661375	69661376	chr3:69661376:G:A	rs7622502	G	A	A	Sox2_MA0143.3	5	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr3	69696124	69696125	chr3:69696125:C:T	rs11128139	C	T	C	Sox2_MA0143.3	1	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr3	69696125	69696126	chr3:69696126:T:C	rs919183	T	C	C	Sox2_MA0143.3	2	1	+	3.5547341015215945	-2.751084876953981	CCTTTGTA
chr3	69761674	69761675	chr3:69761675:C:A	rs116224392	C	A	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr3	69830253	69830254	chr3:69830254:A:G	rs6794889	A	G	a	Sox2_MA0143.3	-13	0	+	0	0	.
chr3	69830283	69830284	chr3:69830284:T:A	rs77695697	T	A	t	Sox2_MA0143.3	17	0	+	0	0	.
chr3	70000788	70000789	chr3:70000789:G:C	chr3:70000789:G:C	G	C	G	Sox2_MA0143.3	24	0	+	0	0	.
chr3	70108752	70108753	chr3:70108753:A:G	rs73105955	A	G	G	Sox2_MA0143.3	4	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr3	70180734	70180735	chr3:70180735:C:A	rs4557126	C	A	C	Sox2_MA0143.3	9	0	-	0	0	.
chr3	70385536	70385537	chr3:70385537:G:A	rs145586341	G	A	G	Sox2_MA0143.3	10	0	-	0	0	.
chr3	70433923	70433924	chr3:70433924:T:C	rs9861432	T	C	T	Sox2_MA0143.3	-4	0	+	0	0	.
chr3	70527594	70527595	chr3:70527595:T:C	rs62256300	T	C	T	Sox2_MA0143.3	-9	0	+	0	0	.
chr3	70565742	70565743	chr3:70565743:T:C	rs1532197	T	C	T	Sox2_MA0143.3	16	0	-	0	0	.
chr3	70605695	70605696	chr3:70605696:A:G	rs34168178	A	G	A	Sox2_MA0143.3	-3	0	-	0	0	.
chr3	70822247	70822248	chr3:70822248:A:T	rs1002200	A	T	T	Sox2_MA0143.3	-9	0	+	0	0	.
chr3	70840171	70840172	chr3:70840172:C:G	rs11927771	C	G	G	Sox2_MA0143.3	27	0	+	0	0	.
chr3	70872692	70872693	chr3:70872693:C:T	rs112660335	C	T	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr3	70882172	70882173	chr3:70882173:C:T	rs62257169	C	T	C	Sox2_MA0143.3	23	0	+	0	0	.
chr3	70935907	70935908	chr3:70935908:C:A	rs11928769	C	A	C	Sox2_MA0143.3	8	0	+	0	0	.
chr3	70952103	70952104	chr3:70952104:C:G	rs6789153	C	G	G	Sox2_MA0143.3	16	0	-	0	0	.
chr3	71103532	71103533	chr3:71103533:T:C	rs867449847	T	C	T	Sox2_MA0143.3	3	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr3	71103545	71103546	chr3:71103546:T:C	rs6773327	T	C	T	Sox2_MA0143.3	16	0	+	0	0	.
chr3	71130690	71130691	chr3:71130691:T:C	rs58847217	T	C	T	Sox2_MA0143.3	4	1	+	3.5547341015215945	-3.3540206777936254	CCTTTGTA
chr3	71251829	71251830	chr3:71251830:T:C	rs189524114	T	C	T	Sox2_MA0143.3	17	0	+	0	0	.
chr3	71310133	71310134	chr3:71310134:T:C	rs140280045	T	C	T	Sox2_MA0143.3	2	1	-	9.019595766176417	2.900948058900136	CCATTGTC
chr3	71373876	71373877	chr3:71373877:G:C	rs11715843	G	C	G	Sox2_MA0143.3	0	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr3	71487455	71487456	chr3:71487456:G:A	rs60281674	G	A	A	Sox2_MA0143.3	-16	0	-	0	0	.
chr3	71490111	71490112	chr3:71490112:A:G	rs55853340	A	G	A	Sox2_MA0143.3	-8	0	-	0	0	.
chr3	71550925	71550926	chr3:71550926:A:G	rs9872351	A	G	A	Sox2_MA0143.3	-5	0	+	0	0	.
chr3	71654198	71654199	chr3:71654199:C:T	rs704269	C	T	T	Sox2_MA0143.3	-18	0	-	0	0	.
chr3	71704046	71704047	chr3:71704047:G:A	rs2218651	G	A	G	Sox2_MA0143.3	1	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr3	71726031	71726032	chr3:71726032:C:G	rs554120585	C	G	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr3	71731544	71731545	chr3:71731545:G:A	rs73090625	G	A	G	Sox2_MA0143.3	-5	0	+	0	0	.
chr3	71901686	71901687	chr3:71901687:C:T	rs73105069	C	T	C	Sox2_MA0143.3	20	0	+	0	0	.
chr3	71910323	71910324	chr3:71910324:G:C	rs75622164	G	C	G	Sox2_MA0143.3	22	0	-	0	0	.
chr3	71921455	71921456	chr3:71921456:T:G	rs9870503	T	G	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr3	71985277	71985278	chr3:71985278:T:C	rs62245468	T	C	C	Sox2_MA0143.3	14	0	-	0	0	.
chr3	72079912	72079913	chr3:72079913:G:A	rs1546389	G	A	G	Sox2_MA0143.3	-9	0	+	0	0	.
chr3	72079947	72079948	chr3:72079948:C:G	rs9813856	C	G	C	Sox2_MA0143.3	26	0	+	0	0	.
chr3	72098082	72098083	chr3:72098083:G:A	rs62243858	G	A	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr3	72187282	72187283	chr3:72187283:T:C	rs4677109	T	C	T	Sox2_MA0143.3	2	1	+	3.5547341015215945	-2.751084876953981	CCTTTGTA
chr3	72217120	72217121	chr3:72217121:G:A	rs4677112	G	A	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr3	72228625	72228626	chr3:72228626:A:G	rs9875623	A	G	A	Sox2_MA0143.3	19	0	+	0	0	.
chr3	72234472	72234473	chr3:72234473:T:G	rs554449604	T	G	T	Sox2_MA0143.3	-5	0	+	0	0	.
chr3	72242806	72242807	chr3:72242807:A:G	rs4677119	A	G	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr3	72247693	72247694	chr3:72247694:G:C	rs9862489	G	C	G	Sox2_MA0143.3	26	0	+	0	0	.
chr3	72339933	72339934	chr3:72339934:T:G	rs73840834	T	G	T	Sox2_MA0143.3	-1	0	+	0	0	.
chr3	72339948	72339949	chr3:72339949:T:G	rs144872879	T	G	G	Sox2_MA0143.3	14	0	+	0	0	.
chr3	72345592	72345593	chr3:72345593:A:C	rs114111586	A	C	A	Sox2_MA0143.3	-10	0	+	0	0	.
chr3	72377190	72377191	chr3:72377191:T:C	rs183056342	T	C	C	Sox2_MA0143.3	23	0	+	0	0	.
chr3	72406645	72406646	chr3:72406646:A:C	rs11128265	A	C	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr3	72413426	72413427	chr3:72413427:T:C	rs77330209	T	C	T	Sox2_MA0143.3	24	0	+	0	0	.
chr3	72591031	72591032	chr3:72591032:C:T	rs73109243	C	T	C	Sox2_MA0143.3	18	0	-	0	0	.
chr3	72723834	72723835	chr3:72723835:C:T	rs115521072	C	T	T	Sox2_MA0143.3	10	0	+	0	0	.
chr3	72888786	72888787	chr3:72888787:A:G	rs138211405	A	G	A	Sox2_MA0143.3	-18	0	+	0	0	.
chr3	72973549	72973550	chr3:72973550:G:A	rs13081583	G	A	G	Sox2_MA0143.3	14	0	-	0	0	.
chr3	73088515	73088516	chr3:73088516:G:C	rs9813201	G	C	C	Sox2_MA0143.3	23	0	-	0	0	.
chr3	73103826	73103827	chr3:73103827:C:T	rs17010523	C	T	C	Sox2_MA0143.3	25	0	+	0	0	.
chr3	73211091	73211092	chr3:73211092:A:C	rs77597406	A	C	A	Sox2_MA0143.3	24	0	-	0	0	.
chr3	73295721	73295722	chr3:73295722:C:A	rs6795726	C	A	A	Sox2_MA0143.3	1	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr3	73299244	73299245	chr3:73299245:A:G	rs17701346	A	G	A	Sox2_MA0143.3	2	1	+	9.019595766176417	2.900948058900136	CCATTGTC
chr3	73377730	73377731	chr3:73377731:G:A	rs3845867	G	A	A	Sox2_MA0143.3	24	0	+	0	0	.
chr3	73384934	73384935	chr3:73384935:A:G	rs6787588	A	G	A	Sox2_MA0143.3	18	0	-	0	0	.
chr3	73602231	73602232	chr3:73602232:A:T	rs6809923	A	T	T	Sox2_MA0143.3	-9	0	-	0	0	.
chr3	73656392	73656393	chr3:73656393:C:T	rs13082404	C	T	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr3	73656396	73656397	chr3:73656397:C:T	rs137864514	C	T	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr3	73656402	73656403	chr3:73656403:C:T	rs192963395	C	T	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr3	73668230	73668231	chr3:73668231:T:G	rs1511525	T	G	T	Sox2_MA0143.3	14	0	+	0	0	.
chr3	73727229	73727230	chr3:73727230:G:T	rs11924512	G	T	T	Sox2_MA0143.3	7	1	-	9.019595766176417	3.3675628303222993	CCATTGTC
chr3	73727234	73727235	chr3:73727235:T:C	rs6763900	T	C	T	Sox2_MA0143.3	2	1	-	9.019595766176417	2.900948058900136	CCATTGTC
chr3	73766390	73766391	chr3:73766391:G:A	rs145628004	G	A	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr3	73884252	73884253	chr3:73884253:G:A	rs142906591	G	A	G	Sox2_MA0143.3	11	0	-	0	0	.
chr3	74168012	74168013	chr3:74168013:A:G	rs278464	A	G	G	Sox2_MA0143.3	-9	0	+	0	0	.
chr3	74458558	74458559	chr3:74458559:T:C	rs6549596	T	C	C	Sox2_MA0143.3	22	0	-	0	0	.
chr3	74535453	74535454	chr3:74535454:A:C	rs9831609	A	C	A	Sox2_MA0143.3	18	0	-	0	0	.
chr3	74643680	74643681	chr3:74643681:T:G	rs113497084	T	G	G	Sox2_MA0143.3	-16	0	-	0	0	.
chr3	74751816	74751817	chr3:74751817:G:T	rs184422098	G	T	A	Sox2_MA0143.3	10	0	+	0	0	.
chr3	75337145	75337146	chr3:75337146:G:A	rs6769147	G	A	.	Sox2_MA0143.3	0	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr3	75362007	75362008	chr3:75362008:T:A	rs57197843	T	A	.	Sox2_MA0143.3	16	0	+	0	0	.
chr3	75491071	75491072	chr3:75491072:C:T	rs11715552	C	T	.	Sox2_MA0143.3	10	0	-	0	0	.
chr3	75605750	75605751	chr3:75605751:T:C	rs2918533	T	C	.	Sox2_MA0143.3	9	0	+	0	0	.
chr3	75672243	75672244	chr3:75672244:C:T	rs76076008	C	T	c	Sox2_MA0143.3	12	0	+	0	0	.
chr3	75672365	75672366	chr3:75672366:A:G	rs73126903	A	G	a	Sox2_MA0143.3	19	0	-	0	0	.
chr3	75738359	75738360	chr3:75738360:C:A	rs79432557	C	A	c	Sox2_MA0143.3	-15	0	-	0	0	.
chr3	75778757	75778758	chr3:75778758:T:C	rs62269667	T	C	t	Sox2_MA0143.3	2	1	-	9.613475778572903	3.494828071296623	CCATTGTT
chr3	75819002	75819003	chr3:75819003:T:C	rs11717095	T	C	t	Sox2_MA0143.3	-12	0	-	0	0	.
chr3	76439048	76439049	chr3:76439049:T:G	rs17792828	T	G	T	Sox2_MA0143.3	-15	0	-	0	0	.
chr3	76632343	76632344	chr3:76632344:C:T	rs7634503	C	T	T	Sox2_MA0143.3	27	0	+	0	0	.
chr3	76770514	76770515	chr3:76770515:C:T	rs267131	C	T	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr3	76815822	76815823	chr3:76815823:C:T	rs138631144	C	T	C	Sox2_MA0143.3	19	0	+	0	0	.
chr3	76913105	76913106	chr3:76913106:A:T	rs149547929	A	T	A	Sox2_MA0143.3	19	0	-	0	0	.
chr3	77008535	77008536	chr3:77008536:C:A	rs4257592	C	A	C	Sox2_MA0143.3	0	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr3	77041476	77041477	chr3:77041477:A:C	rs1413498705	A	C	A	Sox2_MA0143.3	9	0	-	0	0	.
chr3	77065978	77065979	chr3:77065979:C:T	rs12630044	C	T	C	Sox2_MA0143.3	23	0	-	0	0	.
chr3	77297811	77297812	chr3:77297812:G:A	rs998037	G	A	A	Sox2_MA0143.3	-18	0	-	0	0	.
chr3	77346844	77346845	chr3:77346845:C:T	rs9875780	C	T	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr3	77378205	77378206	chr3:77378206:A:C	rs4234496	A	C	C	Sox2_MA0143.3	14	0	+	0	0	.
chr3	77513039	77513040	chr3:77513040:A:T	rs13319996	A	T	T	Sox2_MA0143.3	12	0	-	0	0	.
chr3	77585877	77585878	chr3:77585878:G:T	rs775743	G	T	G	Sox2_MA0143.3	20	0	+	0	0	.
chr3	77586539	77586540	chr3:77586540:C:T	rs775739	C	T	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr3	77601647	77601648	chr3:77601648:T:C	rs1666125	T	C	T	Sox2_MA0143.3	-3	0	+	0	0	.
chr3	77653186	77653187	chr3:77653187:A:G	rs776139	A	G	A	Sox2_MA0143.3	13	0	-	0	0	.
chr3	77668228	77668229	chr3:77668229:G:T	rs35347815	G	T	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr3	78123302	78123303	chr3:78123303:T:A	rs114261544	T	A	T	Sox2_MA0143.3	15	0	+	0	0	.
chr3	78164058	78164059	chr3:78164059:G:A	rs7646968	G	A	G	Sox2_MA0143.3	13	0	-	0	0	.
chr3	78344174	78344175	chr3:78344175:A:G	rs56954626	A	G	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr3	78455571	78455572	chr3:78455572:A:G	rs7631773	A	G	A	Sox2_MA0143.3	-18	0	+	0	0	.
chr3	78506297	78506298	chr3:78506298:A:G	rs11709736	A	G	A	Sox2_MA0143.3	-13	0	+	0	0	.
chr3	78513042	78513043	chr3:78513043:T:G	rs13098427	T	G	T	Sox2_MA0143.3	-15	0	+	0	0	.
chr3	78644689	78644690	chr3:78644690:T:C	rs2660739	T	C	T	Sox2_MA0143.3	-20	0	+	0	0	.
chr3	78730701	78730702	chr3:78730702:A:C	rs79620436	A	C	A	Sox2_MA0143.3	10	0	+	0	0	.
chr3	78738275	78738276	chr3:78738276:G:A	rs11127631	G	A	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr3	78888936	78888937	chr3:78888937:A:G	rs76650006	A	G	A	Sox2_MA0143.3	24	0	-	0	0	.
chr3	78888964	78888965	chr3:78888965:C:T	rs116340380	C	T	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr3	78951547	78951548	chr3:78951548:C:T	rs17379314	C	T	C	Sox2_MA0143.3	18	0	-	0	0	.
chr3	78972245	78972246	chr3:78972246:C:T	rs1009682	C	T	C	Sox2_MA0143.3	-20	0	-	0	0	.
chr3	79247405	79247406	chr3:79247406:C:T	rs140881468	C	T	C	Sox2_MA0143.3	9	0	-	0	0	.
chr3	80051893	80051894	chr3:80051894:C:T	rs115585947	C	T	C	Sox2_MA0143.3	20	0	-	0	0	.
chr3	80641428	80641429	chr3:80641429:T:C	rs34347827	T	C	T	Sox2_MA0143.3	8	0	-	0	0	.
chr3	80734082	80734083	chr3:80734083:T:C	rs36040644	T	C	T	Sox2_MA0143.3	25	0	+	0	0	.
chr3	81006190	81006191	chr3:81006191:A:G	rs2639213	A	G	A	Sox2_MA0143.3	-3	0	-	0	0	.
chr3	81006194	81006195	chr3:81006195:G:A	rs2639212	G	A	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr3	81095163	81095164	chr3:81095164:A:G	rs140815125	A	G	A	Sox2_MA0143.3	-7	0	-	0	0	.
chr3	81106033	81106034	chr3:81106034:G:T	rs893517	G	T	T	Sox2_MA0143.3	-18	0	+	0	0	.
chr3	81168800	81168801	chr3:81168801:G:T	rs7650037	G	T	G	Sox2_MA0143.3	5	1	+	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr3	81364573	81364574	chr3:81364574:C:T	rs275365	C	T	C	Sox2_MA0143.3	17	0	-	0	0	.
chr3	81756365	81756366	chr3:81756366:A:G	rs2680245	A	G	G	Sox2_MA0143.3	25	0	-	0	0	.
chr3	81764797	81764798	chr3:81764798:A:G	rs144417517	A	G	A	Sox2_MA0143.3	-19	0	+	0	0	.
chr3	81977628	81977629	chr3:81977629:T:G	rs4856368	T	G	G	Sox2_MA0143.3	14	0	-	0	0	.
chr3	81981381	81981382	chr3:81981382:G:A	rs9867563	G	A	A	Sox2_MA0143.3	-5	0	-	0	0	.
chr3	82033172	82033173	chr3:82033173:C:T	rs75851347	C	T	C	Sox2_MA0143.3	26	0	-	0	0	.
chr3	82262674	82262675	chr3:82262675:T:C	rs181672475	T	C	T	Sox2_MA0143.3	26	0	+	0	0	.
chr3	82321800	82321801	chr3:82321801:A:G	rs9811089	A	G	A	Sox2_MA0143.3	21	0	-	0	0	.
chr3	82321881	82321882	chr3:82321882:G:C	rs9849190	G	C	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr3	82423928	82423929	chr3:82423929:A:C	rs7627316	A	C	A	Sox2_MA0143.3	-20	0	+	0	0	.
chr3	82528123	82528124	chr3:82528124:T:A	rs9869493	T	A	T	Sox2_MA0143.3	10	0	+	0	0	.
chr3	82940976	82940977	chr3:82940977:T:C	rs1482632	T	C	T	Sox2_MA0143.3	10	0	+	0	0	.
chr3	83144567	83144568	chr3:83144568:A:G	rs12636715	A	G	A	Sox2_MA0143.3	8	0	-	0	0	.
chr3	83878302	83878303	chr3:83878303:G:C	rs60777853	G	C	G	Sox2_MA0143.3	5	1	+	9.206767037375712	2.298012258060492	CCTTTGTC
chr3	84067370	84067371	chr3:84067371:A:T	rs2091489	A	T	A	Sox2_MA0143.3	4	1	-	3.5547341015215945	-3.3540206777936254	CCTTTGTA
chr3	84552647	84552648	chr3:84552648:C:G	rs62254716	C	G	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr3	84681261	84681262	chr3:84681262:G:A	rs4582072	G	A	A	Sox2_MA0143.3	0	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr3	84926000	84926001	chr3:84926001:C:T	rs58564126	C	T	C	Sox2_MA0143.3	25	0	+	0	0	.
chr3	85361861	85361862	chr3:85361862:G:A	rs12714625	G	A	G	Sox2_MA0143.3	5	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr3	85603546	85603547	chr3:85603547:T:C	rs73141535	T	C	T	Sox2_MA0143.3	25	0	-	0	0	.
chr3	86135851	86135852	chr3:86135852:T:C	rs9809144	T	C	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr3	86388739	86388740	chr3:86388740:T:A	rs28835355	T	A	T	Sox2_MA0143.3	-9	0	-	0	0	.
chr3	86805773	86805774	chr3:86805774:A:C	rs9844776	A	C	C	Sox2_MA0143.3	20	0	+	0	0	.
chr3	86911535	86911536	chr3:86911536:A:G	rs6791881	A	G	A	Sox2_MA0143.3	3	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr3	86949123	86949124	chr3:86949124:G:C	rs149551136	G	C	G	Sox2_MA0143.3	14	0	-	0	0	.
chr3	87145565	87145566	chr3:87145566:G:A	rs7428069	G	A	A	Sox2_MA0143.3	20	0	+	0	0	.
chr3	87307964	87307965	chr3:87307965:A:C	rs2646210	A	C	C	Sox2_MA0143.3	16	0	+	0	0	.
chr3	87359885	87359886	chr3:87359886:C:T	rs139481520	C	T	C	Sox2_MA0143.3	17	0	-	0	0	.
chr3	87364655	87364656	chr3:87364656:C:T	rs62265656	C	T	C	Sox2_MA0143.3	7	1	-	8.864090315184848	3.5547341015215945	CCTTTGTG
chr3	87541717	87541718	chr3:87541718:T:A	rs9855058	T	A	T	Sox2_MA0143.3	14	0	-	0	0	.
chr3	87667684	87667685	chr3:87667685:C:A	rs72615762	C	A	C	Sox2_MA0143.3	-5	0	-	0	0	.
chr3	88032060	88032061	chr3:88032061:A:G	rs930154	A	G	G	Sox2_MA0143.3	11	0	-	0	0	.
chr3	88059389	88059390	chr3:88059390:C:T	rs67376749	C	T	C	Sox2_MA0143.3	15	0	+	0	0	.
chr3	88362854	88362855	chr3:88362855:G:C	rs1080302	G	C	C	Sox2_MA0143.3	8	0	+	0	0	.
chr3	88409187	88409188	chr3:88409188:A:G	rs76786342	A	G	A	Sox2_MA0143.3	6	1	-	8.676919043985553	1.7681642646703326	CCATTGTG
chr3	88886701	88886702	chr3:88886702:C:T	rs115176906	C	T	C	Sox2_MA0143.3	27	0	-	0	0	.
chr3	89084991	89084992	chr3:89084992:A:G	rs13075000	A	G	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr3	89576751	89576752	chr3:89576752:C:T	rs73153219	C	T	T	Sox2_MA0143.3	27	0	-	0	0	.
chr3	94174365	94174366	chr3:94174366:A:G	rs9857105	A	G	G	Sox2_MA0143.3	26	0	+	0	0	.
chr3	94345211	94345212	chr3:94345212:C:T	rs368861115	C	T	C	Sox2_MA0143.3	-5	0	-	0	0	.
chr3	94516308	94516309	chr3:94516309:C:T	rs9290298	C	T	C	Sox2_MA0143.3	14	0	-	0	0	.
chr3	94549312	94549313	chr3:94549313:C:T	rs957303	C	T	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr3	94734641	94734642	chr3:94734642:G:A	rs16849463	G	A	A	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr3	94845772	94845773	chr3:94845773:T:C	rs9832891	T	C	-	Sox2_MA0143.3	-14	0	-	0	0	.
chr3	94863343	94863344	chr3:94863344:A:G	rs9867704	A	G	A	Sox2_MA0143.3	17	0	-	0	0	.
chr3	95462285	95462286	chr3:95462286:T:C	rs6437870	T	C	G	Sox2_MA0143.3	9	0	+	0	0	.
chr3	95894789	95894790	chr3:95894790:C:T	rs114647877	C	T	C	Sox2_MA0143.3	16	0	+	0	0	.
chr3	95939635	95939636	chr3:95939636:T:A	rs9818489	T	A	A	Sox2_MA0143.3	2	1	-	9.613475778572903	9.800647049772198	CCATTGTT
chr3	96623162	96623163	chr3:96623163:G:C	rs60135182	G	C	g	Sox2_MA0143.3	0	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr3	96674955	96674956	chr3:96674956:G:A	rs6769480	G	A	g	Sox2_MA0143.3	-15	0	-	0	0	.
chr3	96705418	96705419	chr3:96705419:T:G	rs75439539	T	G	T	Sox2_MA0143.3	4	1	+	3.5547341015215945	-3.3540206777936254	CCTTTGTA
chr3	96908646	96908647	chr3:96908647:T:C	rs62263680	T	C	T	Sox2_MA0143.3	15	0	+	0	0	.
chr3	97229102	97229103	chr3:97229103:C:T	chr3:97229103:C:T	C	T	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr3	97254467	97254468	chr3:97254468:G:A	rs142200535	G	A	g	Sox2_MA0143.3	-5	0	+	0	0	.
chr3	97504255	97504256	chr3:97504256:A:G	rs765181880	A	G	a	Sox2_MA0143.3	23	0	-	0	0	.
chr3	97737204	97737205	chr3:97737205:A:G	rs116693647	A	G	A	Sox2_MA0143.3	12	0	-	0	0	.
chr3	97818029	97818030	chr3:97818030:A:G	rs146668933	A	G	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr3	97840497	97840498	chr3:97840498:T:C	rs7621778	T	C	C	Sox2_MA0143.3	22	0	+	0	0	.
chr3	98116074	98116075	chr3:98116075:G:A	rs7649734	G	A	G	Sox2_MA0143.3	10	0	-	0	0	.
chr3	98309514	98309515	chr3:98309515:C:T	rs7621401	C	T	T	Sox2_MA0143.3	16	0	+	0	0	.
chr3	98557248	98557249	chr3:98557249:G:A	rs72922792	G	A	G	Sox2_MA0143.3	13	0	+	0	0	.
chr3	98557697	98557698	chr3:98557698:T:C	rs575932095	T	C	T	Sox2_MA0143.3	-2	0	-	0	0	.
chr3	98596552	98596553	chr3:98596553:G:A	rs1350792	G	A	A	Sox2_MA0143.3	20	0	-	0	0	.
chr3	98597042	98597043	chr3:98597043:G:C	rs72924748	G	C	G	Sox2_MA0143.3	20	0	-	0	0	.
chr3	98607622	98607623	chr3:98607623:T:C	rs12107194	T	C	T	Sox2_MA0143.3	-12	0	-	0	0	.
chr3	98784265	98784266	chr3:98784266:A:G	rs9815226	A	G	A	Sox2_MA0143.3	-10	0	+	0	0	.
chr3	98785783	98785784	chr3:98785784:G:A	rs4425201	G	A	A	Sox2_MA0143.3	-7	0	-	0	0	.
chr3	98801494	98801495	chr3:98801495:G:A	rs72934641	G	A	G	Sox2_MA0143.3	19	0	+	0	0	.
chr3	98843157	98843158	chr3:98843158:C:T	rs2470867	C	T	T	Sox2_MA0143.3	15	0	+	0	0	.
chr3	98991157	98991158	chr3:98991158:G:T	rs2246861	G	T	T	Sox2_MA0143.3	13	0	-	0	0	.
chr3	99251444	99251445	chr3:99251445:G:A	rs7631722	G	A	A	Sox2_MA0143.3	19	0	+	0	0	.
chr3	99331002	99331003	chr3:99331003:A:G	rs72936399	A	G	A	Sox2_MA0143.3	-2	0	-	0	0	.
chr3	99331013	99331014	chr3:99331014:G:A	rs71313533	G	A	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr3	99391007	99391008	chr3:99391008:G:T	rs76507856	G	T	G	Sox2_MA0143.3	0	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr3	99535278	99535279	chr3:99535279:C:G	rs73134355	C	G	C	Sox2_MA0143.3	11	0	-	0	0	.
chr3	99602127	99602128	chr3:99602128:G:A	rs61394217	G	A	G	Sox2_MA0143.3	26	0	+	0	0	.
chr3	99626178	99626179	chr3:99626179:G:A	rs534705	G	A	G	Sox2_MA0143.3	1	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr3	99678409	99678410	chr3:99678410:T:C	rs35766910	T	C	T	Sox2_MA0143.3	20	0	-	0	0	.
chr3	99772120	99772121	chr3:99772121:T:C	rs186072282	T	C	T	Sox2_MA0143.3	11	0	-	0	0	.
chr3	99868384	99868385	chr3:99868385:A:G	rs115104237	A	G	A	Sox2_MA0143.3	11	0	-	0	0	.
chr3	99944384	99944385	chr3:99944385:G:A	rs148206851	G	A	G	Sox2_MA0143.3	0	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr3	99960739	99960740	chr3:99960740:T:G	rs4244713	T	G	G	Sox2_MA0143.3	6	1	+	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr3	100256613	100256614	chr3:100256614:T:A	rs77760672	T	A	T	Sox2_MA0143.3	20	0	+	0	0	.
chr3	100486113	100486114	chr3:100486114:G:A	rs4928088	G	A	G	Sox2_MA0143.3	-16	0	-	0	0	.
chr3	100590884	100590885	chr3:100590885:T:C	rs77284768	T	C	T	Sox2_MA0143.3	-17	0	+	0	0	.
chr3	100590928	100590929	chr3:100590929:T:C	rs1039384752	T	C	T	Sox2_MA0143.3	27	0	+	0	0	.
chr3	100603518	100603519	chr3:100603519:T:A	rs1014130321	T	A	T	Sox2_MA0143.3	15	0	-	0	0	.
chr3	101017071	101017072	chr3:101017072:C:T	rs73149120	C	T	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr3	101077525	101077526	chr3:101077526:A:T	rs6441568	A	T	T	Sox2_MA0143.3	-19	0	-	0	0	.
chr3	101092755	101092756	chr3:101092756:A:C	rs1839301	A	C	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr3	101123291	101123292	chr3:101123292:C:A	rs67338296	C	A	C	Sox2_MA0143.3	15	0	-	0	0	.
chr3	101172877	101172878	chr3:101172878:C:T	rs77633136	C	T	C	Sox2_MA0143.3	8	0	+	0	0	.
chr3	101589931	101589932	chr3:101589932:C:T	rs6777292	C	T	T	Sox2_MA0143.3	16	0	-	0	0	.
chr3	102007158	102007159	chr3:102007159:G:A	rs1553963	G	A	A	Sox2_MA0143.3	-14	0	-	0	0	.
chr3	102020456	102020457	chr3:102020457:T:C	chr3:102020457:T:C	T	C	T	Sox2_MA0143.3	3	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr3	102051469	102051470	chr3:102051470:T:C	rs4683961	T	C	T	Sox2_MA0143.3	-11	0	-	0	0	.
chr3	102061110	102061111	chr3:102061111:G:A	rs72942980	G	A	G	Sox2_MA0143.3	9	0	+	0	0	.
chr3	102079016	102079017	chr3:102079017:G:C	rs60525150	G	C	C	Sox2_MA0143.3	25	0	-	0	0	.
chr3	102085412	102085413	chr3:102085413:T:A	rs13092802	T	A	A	Sox2_MA0143.3	21	0	-	0	0	.
chr3	102180929	102180930	chr3:102180930:T:C	rs9811481	T	C	T	Sox2_MA0143.3	25	0	-	0	0	.
chr3	102183662	102183663	chr3:102183663:G:T	rs79541358	G	T	G	Sox2_MA0143.3	20	0	-	0	0	.
chr3	102257947	102257948	chr3:102257948:T:G	rs11707798	T	G	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr3	102263116	102263117	chr3:102263117:C:T	rs62272140	C	T	C	Sox2_MA0143.3	27	0	-	0	0	.
chr3	102521097	102521098	chr3:102521098:C:T	rs1284784	C	T	T	Sox2_MA0143.3	22	0	-	0	0	.
chr3	102527116	102527117	chr3:102527117:A:G	rs17823437	A	G	A	Sox2_MA0143.3	20	0	+	0	0	.
chr3	102625800	102625801	chr3:102625801:G:C	rs7614086	G	C	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr3	102780677	102780678	chr3:102780678:C:T	rs1498083	C	T	C	Sox2_MA0143.3	7	1	-	8.676919043985553	3.3675628303222993	CCATTGTG
chr3	102897075	102897076	chr3:102897076:A:T	rs900650110	A	T	A	Sox2_MA0143.3	14	0	-	0	0	.
chr3	102953555	102953556	chr3:102953556:C:T	rs9790049	C	T	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr3	103057087	103057088	chr3:103057088:T:A	rs183382674	T	A	T	Sox2_MA0143.3	19	0	-	0	0	.
chr3	103252587	103252588	chr3:103252588:C:A	rs13066548	C	A	C	Sox2_MA0143.3	15	0	+	0	0	.
chr3	103252595	103252596	chr3:103252596:A:G	rs7609703	A	G	G	Sox2_MA0143.3	23	0	+	0	0	.
chr3	103374828	103374829	chr3:103374829:G:A	rs72966253	G	A	G	Sox2_MA0143.3	11	0	+	0	0	.
chr3	103374828	103374829	chr3:103374829:G:T	chr3:103374829:G:T	G	T	G	Sox2_MA0143.3	11	0	+	0	0	.
chr3	103611286	103611287	chr3:103611287:T:G	rs1511632	T	G	G	Sox2_MA0143.3	6	1	+	8.676919043985553	1.7681642646703326	CCATTGTG
chr3	103926722	103926723	chr3:103926723:G:A	rs6780203	G	A	G	Sox2_MA0143.3	9	0	+	0	0	.
chr3	104098172	104098173	chr3:104098173:C:T	rs746170	C	T	T	Sox2_MA0143.3	-12	0	-	0	0	.
chr3	104239919	104239920	chr3:104239920:C:A	rs34129950	C	A	c	Sox2_MA0143.3	-16	0	+	0	0	.
chr3	104269560	104269561	chr3:104269561:T:C	rs35813160	T	C	T	Sox2_MA0143.3	3	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr3	104449586	104449587	chr3:104449587:A:C	rs2673472	A	C	C	Sox2_MA0143.3	27	0	+	0	0	.
chr3	104520872	104520873	chr3:104520873:T:A	rs61090058	T	A	T	Sox2_MA0143.3	20	0	-	0	0	.
chr3	104909455	104909456	chr3:104909456:C:T	rs192104027	C	T	C	Sox2_MA0143.3	21	0	+	0	0	.
chr3	104909459	104909460	chr3:104909460:C:A	rs62259041	C	A	C	Sox2_MA0143.3	25	0	+	0	0	.
chr3	104939483	104939484	chr3:104939484:T:C	rs6783013	T	C	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr3	104963572	104963573	chr3:104963573:T:G	rs9830221	T	G	-	Sox2_MA0143.3	-12	0	+	0	0	.
chr3	105368045	105368046	chr3:105368046:C:G	rs781586644	C	G	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr3	105368046	105368047	chr3:105368047:C:A	rs146379340	C	A	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr3	105386338	105386339	chr3:105386339:G:C	rs73177478	G	C	G	Sox2_MA0143.3	1	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr3	105532600	105532601	chr3:105532601:C:G	rs73192770	C	G	C	Sox2_MA0143.3	24	0	+	0	0	.
chr3	105606221	105606222	chr3:105606222:G:A	rs368879559	G	A	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr3	105606233	105606234	chr3:105606234:A:G	rs147531850	A	G	A	Sox2_MA0143.3	-20	0	-	0	0	.
chr3	105611949	105611950	chr3:105611950:G:C	rs183190108	G	C	G	Sox2_MA0143.3	9	0	-	0	0	.
chr3	105611969	105611970	chr3:105611970:T:C	rs77120645	T	C	T	Sox2_MA0143.3	-11	0	-	0	0	.
chr3	105825137	105825138	chr3:105825138:T:C	rs73857222	T	C	T	Sox2_MA0143.3	-5	0	+	0	0	.
chr3	105869170	105869171	chr3:105869171:G:C	chr3:105869171:G:C	G	C	G	Sox2_MA0143.3	26	0	-	0	0	.
chr3	105877566	105877567	chr3:105877567:A:G	rs117472034	A	G	A	Sox2_MA0143.3	-10	0	-	0	0	.
chr3	105966319	105966320	chr3:105966320:C:T	rs2134720	C	T	T	Sox2_MA0143.3	26	0	+	0	0	.
chr3	106045637	106045638	chr3:106045638:C:T	rs7629641	C	T	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr3	106046669	106046670	chr3:106046670:C:A	rs7632765	C	A	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr3	106046675	106046676	chr3:106046676:G:C	rs7632922	G	C	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr3	106046675	106046676	chr3:106046676:G:T	chr3:106046676:G:T	G	T	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr3	106071500	106071501	chr3:106071501:C:T	rs6788447	C	T	C	Sox2_MA0143.3	5	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr3	106204754	106204755	chr3:106204755:T:C	rs12492393	T	C	C	Sox2_MA0143.3	26	0	-	0	0	.
chr3	106206509	106206510	chr3:106206510:C:A	rs75704123	C	A	C	Sox2_MA0143.3	23	0	-	0	0	.
chr3	106206526	106206527	chr3:106206527:A:G	rs35783488	A	G	A	Sox2_MA0143.3	6	1	-	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr3	106208662	106208663	chr3:106208663:T:C	rs36104034	T	C	T	Sox2_MA0143.3	-13	0	+	0	0	.
chr3	106208676	106208677	chr3:106208677:C:T	rs35224967	C	T	T	Sox2_MA0143.3	1	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr3	106251636	106251637	chr3:106251637:T:G	rs75974360	T	G	t	Sox2_MA0143.3	27	0	+	0	0	.
chr3	106317499	106317500	chr3:106317500:G:A	rs2141766	G	A	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr3	106487307	106487308	chr3:106487308:G:A	rs112425165	G	A	G	Sox2_MA0143.3	25	0	-	0	0	.
chr3	106963435	106963436	chr3:106963436:G:A	rs60287766	G	A	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr3	106981613	106981614	chr3:106981614:C:G	rs62322814	C	G	C	Sox2_MA0143.3	5	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr3	107106513	107106514	chr3:107106514:C:T	rs145072342	C	T	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr3	107269372	107269373	chr3:107269373:T:C	rs77185931	T	C	T	Sox2_MA0143.3	11	0	+	0	0	.
chr3	107310820	107310821	chr3:107310821:C:T	rs4855744	C	T	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr3	107366911	107366912	chr3:107366912:G:T	rs114185997	G	T	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr3	107368226	107368227	chr3:107368227:C:T	rs17807525	C	T	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr3	107421315	107421316	chr3:107421316:C:T	rs7611467	C	T	C	Sox2_MA0143.3	1	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr3	107978308	107978309	chr3:107978309:C:T	rs12486547	C	T	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr3	107988241	107988242	chr3:107988242:A:T	rs709468	A	T	A	Sox2_MA0143.3	4	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr3	108022521	108022522	chr3:108022522:A:T	rs75898753	A	T	A	Sox2_MA0143.3	-19	0	+	0	0	.
chr3	108088910	108088911	chr3:108088911:C:G	chr3:108088911:C:G	C	G	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr3	108123457	108123458	chr3:108123458:C:T	rs114562923	C	T	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr3	108175644	108175645	chr3:108175645:C:A	rs11917750	C	A	C	Sox2_MA0143.3	24	0	+	0	0	.
chr3	108266538	108266539	chr3:108266539:T:C	rs4855632	T	C	t	Sox2_MA0143.3	2	1	-	9.019595766176417	2.900948058900136	CCATTGTC
chr3	108293714	108293715	chr3:108293715:C:T	rs2061246	C	T	C	Sox2_MA0143.3	11	0	-	0	0	.
chr3	108300351	108300352	chr3:108300352:A:C	rs17830546	A	C	A	Sox2_MA0143.3	14	0	+	0	0	.
chr3	108421299	108421300	chr3:108421300:C:T	rs76087953	C	T	C	Sox2_MA0143.3	-20	0	-	0	0	.
chr3	108433155	108433156	chr3:108433156:C:T	rs55749606	C	T	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr3	108453618	108453619	chr3:108453619:G:T	rs16854645	G	T	G	Sox2_MA0143.3	1	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr3	108546100	108546101	chr3:108546101:G:A	rs2060986	G	A	G	Sox2_MA0143.3	16	0	-	0	0	.
chr3	108791770	108791771	chr3:108791771:A:G	rs72947349	A	G	A	Sox2_MA0143.3	3	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr3	109023198	109023199	chr3:109023199:C:G	rs9860544	C	G	G	Sox2_MA0143.3	9	0	-	0	0	.
chr3	109033584	109033585	chr3:109033585:G:A	rs6798835	G	A	G	Sox2_MA0143.3	18	0	-	0	0	.
chr3	109072396	109072397	chr3:109072397:T:G	rs530451451	T	G	T	Sox2_MA0143.3	-11	0	+	0	0	.
chr3	109161670	109161671	chr3:109161671:T:C	rs1356075	T	C	C	Sox2_MA0143.3	17	0	+	0	0	.
chr3	109275998	109275999	chr3:109275999:C:T	rs73852630	C	T	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr3	109276035	109276036	chr3:109276036:G:A	rs62274224	G	A	G	Sox2_MA0143.3	18	0	+	0	0	.
chr3	109695205	109695206	chr3:109695206:A:G	rs79461301	A	G	A	Sox2_MA0143.3	9	0	-	0	0	.
chr3	109792663	109792664	chr3:109792664:T:C	rs75159448	T	C	T	Sox2_MA0143.3	-18	0	+	0	0	.
chr3	109964131	109964132	chr3:109964132:T:C	rs187324541	T	C	T	Sox2_MA0143.3	21	0	-	0	0	.
chr3	109967964	109967965	chr3:109967965:T:C	rs73851071	T	C	T	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr3	110072152	110072153	chr3:110072153:A:G	rs79144000	A	G	A	Sox2_MA0143.3	-12	0	-	0	0	.
chr3	110188418	110188419	chr3:110188419:C:T	rs6793802	C	T	C	Sox2_MA0143.3	15	0	+	0	0	.
chr3	110237368	110237369	chr3:110237369:T:C	rs7631884	T	C	T	Sox2_MA0143.3	22	0	-	0	0	.
chr3	110237407	110237408	chr3:110237408:C:T	rs7620248	C	T	T	Sox2_MA0143.3	-17	0	-	0	0	.
chr3	110538706	110538707	chr3:110538707:G:A	rs73213277	G	A	G	Sox2_MA0143.3	0	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr3	110568681	110568682	chr3:110568682:C:T	rs115350433	C	T	C	Sox2_MA0143.3	8	0	-	0	0	.
chr3	110575861	110575862	chr3:110575862:A:T	rs34350005	A	T	A	Sox2_MA0143.3	-10	0	+	0	0	.
chr3	110603225	110603226	chr3:110603226:A:G	rs11715699	A	G	A	Sox2_MA0143.3	-6	0	+	0	0	.
chr3	110686760	110686761	chr3:110686761:T:C	rs7639101	T	C	T	Sox2_MA0143.3	-8	0	-	0	0	.
chr3	110752292	110752293	chr3:110752293:T:C	rs7640594	T	C	T	Sox2_MA0143.3	22	0	+	0	0	.
chr3	111292234	111292235	chr3:111292235:T:C	rs4682256	T	C	T	Sox2_MA0143.3	26	0	+	0	0	.
chr3	111333366	111333367	chr3:111333367:T:C	rs1489030	T	C	T	Sox2_MA0143.3	26	0	-	0	0	.
chr3	111370680	111370681	chr3:111370681:G:A	rs7640273	G	A	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr3	111373748	111373749	chr3:111373749:G:C	rs1906701	G	C	G	Sox2_MA0143.3	17	0	-	0	0	.
chr3	111497543	111497544	chr3:111497544:C:T	rs13313969	C	T	C	Sox2_MA0143.3	17	0	-	0	0	.
chr3	111531263	111531264	chr3:111531264:G:C	rs12631939	G	C	G	Sox2_MA0143.3	14	0	-	0	0	.
chr3	111585786	111585787	chr3:111585787:T:C	rs2292515	T	C	t	Sox2_MA0143.3	10	0	+	0	0	.
chr3	111591021	111591022	chr3:111591022:A:T	rs59852785	A	T	a	Sox2_MA0143.3	26	0	-	0	0	.
chr3	111728211	111728212	chr3:111728212:A:G	rs4682298	A	G	A	Sox2_MA0143.3	17	0	+	0	0	.
chr3	111735509	111735510	chr3:111735510:G:A	rs141984954	G	A	G	Sox2_MA0143.3	22	0	-	0	0	.
chr3	111761345	111761346	chr3:111761346:T:C	chr3:111761346:T:C	T	C	T	Sox2_MA0143.3	-16	0	-	0	0	.
chr3	111768706	111768707	chr3:111768707:C:T	rs565742991	C	T	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr3	111776712	111776713	chr3:111776713:T:G	rs9870656	T	G	T	Sox2_MA0143.3	-16	0	+	0	0	.
chr3	111859438	111859439	chr3:111859439:C:T	rs72938238	C	T	C	Sox2_MA0143.3	-5	0	-	0	0	.
chr3	111859447	111859448	chr3:111859448:C:G	rs78431011	C	G	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr3	111893519	111893520	chr3:111893520:T:C	rs17491175	T	C	T	Sox2_MA0143.3	-8	0	+	0	0	.
chr3	111903267	111903268	chr3:111903268:G:A	rs1041917201	G	A	G	Sox2_MA0143.3	24	0	-	0	0	.
chr3	111906833	111906834	chr3:111906834:T:G	rs12497276	T	G	T	Sox2_MA0143.3	-12	0	-	0	0	.
chr3	111906839	111906840	chr3:111906840:C:G	rs1282960	C	G	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr3	111967831	111967832	chr3:111967832:G:T	rs376875055	G	T	A	Sox2_MA0143.3	-14	0	-	0	0	.
chr3	112043123	112043124	chr3:112043124:A:G	rs113801793	A	G	A	Sox2_MA0143.3	-1	0	-	0	0	.
chr3	112130132	112130133	chr3:112130133:A:C	rs62280204	A	C	A	Sox2_MA0143.3	2	1	-	8.864090315184848	2.5582713367092715	CCTTTGTG
chr3	112265542	112265543	chr3:112265543:G:A	rs6792318	G	A	G	Sox2_MA0143.3	-14	0	+	0	0	.
chr3	112293992	112293993	chr3:112293993:A:T	rs4622877	A	T	T	Sox2_MA0143.3	-8	0	+	0	0	.
chr3	112294015	112294016	chr3:112294016:G:A	rs116760558	G	A	G	Sox2_MA0143.3	15	0	+	0	0	.
chr3	112355483	112355484	chr3:112355484:C:A	rs9990216	C	A	A	Sox2_MA0143.3	10	0	+	0	0	.
chr3	112399784	112399785	chr3:112399785:A:T	rs7610866	A	T	T	Sox2_MA0143.3	-1	0	+	0	0	.
chr3	112399791	112399792	chr3:112399792:T:C	rs7644713	T	C	T	Sox2_MA0143.3	6	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr3	112409295	112409296	chr3:112409296:T:C	rs1872987	T	C	c	Sox2_MA0143.3	-12	0	-	0	0	.
chr3	112433424	112433425	chr3:112433425:A:G	rs7650635	A	G	A	Sox2_MA0143.3	2	1	+	8.676919043985553	2.5582713367092715	CCATTGTG
chr3	112509692	112509693	chr3:112509693:C:T	rs111298518	C	T	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr3	112546369	112546370	chr3:112546370:A:G	rs533639140	A	G	A	Sox2_MA0143.3	22	0	-	0	0	.
chr3	112690254	112690255	chr3:112690255:A:G	rs1249928	A	G	A	Sox2_MA0143.3	-10	0	-	0	0	.
chr3	112696621	112696622	chr3:112696622:A:G	rs146236965	A	G	A	Sox2_MA0143.3	-5	0	-	0	0	.
chr3	112958295	112958296	chr3:112958296:C:T	rs75865773	C	T	C	Sox2_MA0143.3	-5	0	-	0	0	.
chr3	112991533	112991534	chr3:112991534:T:C	rs7651481	T	C	T	Sox2_MA0143.3	18	0	+	0	0	.
chr3	113035632	113035633	chr3:113035633:G:C	rs535750741	G	C	G	Sox2_MA0143.3	12	0	+	0	0	.
chr3	113053394	113053395	chr3:113053395:C:T	rs78176257	C	T	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr3	113104518	113104519	chr3:113104519:T:A	rs2613936	T	A	A	Sox2_MA0143.3	-16	0	-	0	0	.
chr3	113167106	113167107	chr3:113167107:C:T	rs13095517	C	T	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr3	113211844	113211845	chr3:113211845:G:A	rs371173012	G	A	g	Sox2_MA0143.3	-10	0	+	0	0	.
chr3	113211864	113211865	chr3:113211865:T:C	rs1397405292	T	C	t	Sox2_MA0143.3	10	0	+	0	0	.
chr3	113234943	113234944	chr3:113234944:C:T	rs72942473	C	T	C	Sox2_MA0143.3	9	0	+	0	0	.
chr3	113240360	113240361	chr3:113240361:A:T	rs7641410	A	T	A	Sox2_MA0143.3	-12	0	-	0	0	.
chr3	113254146	113254147	chr3:113254147:G:A	rs9864636	G	A	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr3	113264560	113264561	chr3:113264561:T:G	chr3:113264561:T:G	T	G	T	Sox2_MA0143.3	-19	0	-	0	0	.
chr3	113533780	113533781	chr3:113533781:G:A	rs542804898	G	A	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr3	113758839	113758840	chr3:113758840:G:T	chr3:113758840:G:T	G	T	G	Sox2_MA0143.3	5	1	+	9.206767037375712	2.298012258060492	CCTTTGTC
chr3	113775012	113775013	chr3:113775013:G:A	rs62268169	G	A	G	Sox2_MA0143.3	-3	0	-	0	0	.
chr3	113867639	113867640	chr3:113867640:A:G	rs4682505	A	G	A	Sox2_MA0143.3	2	1	+	9.613475778572903	3.494828071296623	CCATTGTT
chr3	113867653	113867654	chr3:113867654:A:G	rs2712364	A	G	G	Sox2_MA0143.3	16	0	+	0	0	.
chr3	113874225	113874226	chr3:113874226:T:G	rs2399492	T	G	T	Sox2_MA0143.3	10	0	+	0	0	.
chr3	113957366	113957367	chr3:113957367:A:G	rs115295373	A	G	A	Sox2_MA0143.3	13	0	+	0	0	.
chr3	114210631	114210632	chr3:114210632:T:C	rs59332094	T	C	t	Sox2_MA0143.3	-4	0	-	0	0	.
chr3	114217025	114217026	chr3:114217026:A:G	rs7610054	A	G	A	Sox2_MA0143.3	13	0	-	0	0	.
chr3	114217047	114217048	chr3:114217048:T:C	rs60146067	T	C	T	Sox2_MA0143.3	-9	0	-	0	0	.
chr3	114233313	114233314	chr3:114233314:A:G	rs2279828	A	G	A	Sox2_MA0143.3	6	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr3	114419117	114419118	chr3:114419118:A:G	rs116154532	A	G	A	Sox2_MA0143.3	-4	0	+	0	0	.
chr3	114456706	114456707	chr3:114456707:A:G	rs7620131	A	G	A	Sox2_MA0143.3	4	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr3	114623933	114623934	chr3:114623934:C:T	rs537956248	C	T	C	Sox2_MA0143.3	8	0	+	0	0	.
chr3	114660457	114660458	chr3:114660458:C:T	rs1333664087	C	T	C	Sox2_MA0143.3	12	0	-	0	0	.
chr3	115407021	115407022	chr3:115407022:G:A	rs6781222	G	A	G	Sox2_MA0143.3	25	0	+	0	0	.
chr3	115580532	115580533	chr3:115580533:A:G	rs2118606	A	G	A	Sox2_MA0143.3	-4	0	-	0	0	.
chr3	115659269	115659270	chr3:115659270:T:C	rs6782517	T	C	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr3	115690236	115690237	chr3:115690237:C:T	rs28399399	C	T	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr3	115820008	115820009	chr3:115820009:G:A	rs10934306	G	A	G	Sox2_MA0143.3	26	0	+	0	0	.
chr3	115997318	115997319	chr3:115997319:T:C	rs35764849	T	C	T	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr3	116001245	116001246	chr3:116001246:G:A	rs9289034	G	A	A	Sox2_MA0143.3	23	0	+	0	0	.
chr3	116034189	116034190	chr3:116034190:G:T	rs6787872	G	T	T	Sox2_MA0143.3	-5	0	+	0	0	.
chr3	116058232	116058233	chr3:116058233:C:G	rs9837276	C	G	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr3	116103918	116103919	chr3:116103919:C:T	rs544046611	C	T	C	Sox2_MA0143.3	0	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr3	116300425	116300426	chr3:116300426:T:C	rs74758242	T	C	T	Sox2_MA0143.3	-14	0	-	0	0	.
chr3	116374906	116374907	chr3:116374907:T:C	rs1367770	T	C	C	Sox2_MA0143.3	22	0	-	0	0	.
chr3	116510807	116510808	chr3:116510808:G:A	rs10934349	G	A	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr3	116601023	116601024	chr3:116601024:G:A	rs938909	G	A	G	Sox2_MA0143.3	24	0	+	0	0	.
chr3	116777901	116777902	chr3:116777902:C:T	rs11718636	C	T	T	Sox2_MA0143.3	8	0	-	0	0	.
chr3	116777903	116777904	chr3:116777904:A:G	rs11710827	A	G	G	Sox2_MA0143.3	6	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr3	116836884	116836885	chr3:116836885:A:T	rs62266056	A	T	A	Sox2_MA0143.3	15	0	-	0	0	.
chr3	116896293	116896294	chr3:116896294:T:C	rs62267908	T	C	T	Sox2_MA0143.3	12	0	-	0	0	.
chr3	117021357	117021358	chr3:117021358:T:A	rs62266229	T	A	T	Sox2_MA0143.3	13	0	-	0	0	.
chr3	117272697	117272698	chr3:117272698:A:C	rs9862702	A	C	A	Sox2_MA0143.3	18	0	-	0	0	.
chr3	117409069	117409070	chr3:117409070:C:T	rs75368268	C	T	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr3	117518869	117518870	chr3:117518870:T:C	rs9844420	T	C	T	Sox2_MA0143.3	-17	0	+	0	0	.
chr3	117518870	117518871	chr3:117518871:G:C	rs9824762	G	C	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr3	117520493	117520494	chr3:117520494:T:C	rs1979868	T	C	T	Sox2_MA0143.3	-2	0	+	0	0	.
chr3	117548441	117548442	chr3:117548442:C:T	rs16827132	C	T	C	Sox2_MA0143.3	5	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr3	117602944	117602945	chr3:117602945:A:G	rs1501866	A	G	G	Sox2_MA0143.3	-2	0	+	0	0	.
chr3	117602945	117602946	chr3:117602946:C:A	rs191405190	C	A	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr3	117873982	117873983	chr3:117873983:T:C	rs13093355	T	C	T	Sox2_MA0143.3	3	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr3	118245218	118245219	chr3:118245219:A:G	rs12695364	A	G	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr3	118467141	118467142	chr3:118467142:C:T	rs1520119	C	T	T	Sox2_MA0143.3	16	0	-	0	0	.
chr3	118480429	118480430	chr3:118480430:C:A	rs11715251	C	A	A	Sox2_MA0143.3	1	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr3	118531951	118531952	chr3:118531952:G:A	rs77756430	G	A	G	Sox2_MA0143.3	21	0	-	0	0	.
chr3	118926469	118926470	chr3:118926470:G:T	rs56232409	G	T	G	Sox2_MA0143.3	17	0	-	0	0	.
chr3	118936898	118936899	chr3:118936899:G:T	rs56160739	G	T	g	Sox2_MA0143.3	0	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr3	118966639	118966640	chr3:118966640:G:A	rs6785161	G	A	a	Sox2_MA0143.3	14	0	-	0	0	.
chr3	118992328	118992329	chr3:118992329:T:C	rs9836742	T	C	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr3	119016174	119016175	chr3:119016175:A:G	rs12053925	A	G	A	Sox2_MA0143.3	-8	0	-	0	0	.
chr3	119016178	119016179	chr3:119016179:G:C	rs141685433	G	C	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr3	119016183	119016184	chr3:119016184:T:C	rs2866465	T	C	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr3	119089756	119089757	chr3:119089757:G:A	rs2717269	G	A	G	Sox2_MA0143.3	0	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr3	119098828	119098829	chr3:119098829:G:A	rs116269310	G	A	G	Sox2_MA0143.3	15	0	-	0	0	.
chr3	119241744	119241745	chr3:119241745:T:C	rs72655916	T	C	T	Sox2_MA0143.3	-3	0	+	0	0	.
chr3	119241762	119241763	chr3:119241763:G:A	rs17553053	G	A	G	Sox2_MA0143.3	15	0	+	0	0	.
chr3	119306979	119306980	chr3:119306980:G:A	rs6438519	G	A	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr3	119322663	119322664	chr3:119322664:C:T	rs143630279	C	T	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr3	119349665	119349666	chr3:119349666:C:A	rs111404614	C	A	C	Sox2_MA0143.3	13	0	-	0	0	.
chr3	119350303	119350304	chr3:119350304:T:C	rs557624592	T	C	T	Sox2_MA0143.3	-19	0	-	0	0	.
chr3	119628552	119628553	chr3:119628553:A:G	rs2280580	A	G	G	Sox2_MA0143.3	13	0	-	0	0	.
chr3	119640226	119640227	chr3:119640227:T:C	rs9865825	T	C	T	Sox2_MA0143.3	25	0	-	0	0	.
chr3	119671414	119671415	chr3:119671415:G:C	rs6794579	G	C	G	Sox2_MA0143.3	1	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr3	119811179	119811180	chr3:119811180:G:A	rs2461824	G	A	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr3	119873461	119873462	chr3:119873462:A:G	rs9857226	A	G	A	Sox2_MA0143.3	-2	0	-	0	0	.
chr3	120094346	120094347	chr3:120094347:T:C	rs1329115002	T	C	T	Sox2_MA0143.3	-20	0	+	0	0	.
chr3	120094348	120094349	chr3:120094349:C:T	rs942525459	C	T	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr3	120244524	120244525	chr3:120244525:C:T	rs55846983	C	T	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr3	120281106	120281107	chr3:120281107:T:C	rs2319669	T	C	T	Sox2_MA0143.3	-10	0	+	0	0	.
chr3	120307731	120307732	chr3:120307732:A:T	rs787198	A	T	T	Sox2_MA0143.3	9	0	-	0	0	.
chr3	120369154	120369155	chr3:120369155:C:T	rs16831074	C	T	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr3	120420017	120420018	chr3:120420018:T:A	rs1879434	T	A	T	Sox2_MA0143.3	21	0	-	0	0	.
chr3	120420029	120420030	chr3:120420030:A:G	rs141329424	A	G	A	Sox2_MA0143.3	9	0	-	0	0	.
chr3	120425216	120425217	chr3:120425217:T:C	rs916512	T	C	T	Sox2_MA0143.3	-3	0	-	0	0	.
chr3	120442013	120442014	chr3:120442014:C:G	rs77248074	C	G	C	Sox2_MA0143.3	11	0	-	0	0	.
chr3	120451233	120451234	chr3:120451234:G:T	rs566612906	G	T	G	Sox2_MA0143.3	26	0	-	0	0	.
chr3	120451241	120451242	chr3:120451242:T:G	rs538695826	T	G	T	Sox2_MA0143.3	18	0	-	0	0	.
chr3	120451245	120451246	chr3:120451246:T:C	rs947559083	T	C	T	Sox2_MA0143.3	14	0	-	0	0	.
chr3	120550431	120550432	chr3:120550432:T:C	rs4464490	T	C	C	Sox2_MA0143.3	6	1	+	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr3	120555026	120555027	chr3:120555027:C:T	rs574931529	C	T	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr3	120559842	120559843	chr3:120559843:A:G	rs147071339	A	G	A	Sox2_MA0143.3	27	0	-	0	0	.
chr3	120560572	120560573	chr3:120560573:A:G	rs1369719622	A	G	A	Sox2_MA0143.3	8	0	+	0	0	.
chr3	120689322	120689323	chr3:120689323:A:C	rs72625420	A	C	A	Sox2_MA0143.3	-12	0	-	0	0	.
chr3	120714091	120714092	chr3:120714092:A:G	rs11713594	A	G	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr3	120744002	120744003	chr3:120744003:C:T	rs16831595	C	T	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr3	120781318	120781319	chr3:120781319:T:C	rs137869822	T	C	T	Sox2_MA0143.3	-12	0	+	0	0	.
chr3	120903397	120903398	chr3:120903398:C:T	rs2220255	C	T	C	Sox2_MA0143.3	9	0	-	0	0	.
chr3	121371891	121371892	chr3:121371892:T:C	rs12633406	T	C	t	Sox2_MA0143.3	-4	0	-	0	0	.
chr3	121605795	121605796	chr3:121605796:T:C	rs1464099	T	C	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr3	121624652	121624653	chr3:121624653:C:A	rs1492178	C	A	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr3	121624686	121624687	chr3:121624687:T:G	rs1492177	T	G	T	Sox2_MA0143.3	22	0	+	0	0	.
chr3	121665717	121665718	chr3:121665718:C:T	rs77570895	C	T	C	Sox2_MA0143.3	-20	0	-	0	0	.
chr3	121811097	121811098	chr3:121811098:T:C	rs377083775	T	C	T	Sox2_MA0143.3	20	0	-	0	0	.
chr3	121980390	121980391	chr3:121980391:C:A	rs2877560	C	A	C	Sox2_MA0143.3	20	0	+	0	0	.
chr3	122021981	122021982	chr3:122021982:C:A	rs146384236	C	A	C	Sox2_MA0143.3	-12	0	-	0	0	.
chr3	122394493	122394494	chr3:122394494:A:T	rs9841311	A	T	A	Sox2_MA0143.3	-5	0	-	0	0	.
chr3	122443028	122443029	chr3:122443029:G:A	rs62271979	G	A	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr3	122461640	122461641	chr3:122461641:T:C	rs192949991	T	C	T	Sox2_MA0143.3	21	0	+	0	0	.
chr3	122564964	122564965	chr3:122564965:T:C	rs2332284	T	C	T	Sox2_MA0143.3	-5	0	+	0	0	.
chr3	122635944	122635945	chr3:122635945:G:A	rs12489170	G	A	G	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr3	122693110	122693111	chr3:122693111:T:C	rs1256199	T	C	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr3	122974952	122974953	chr3:122974953:A:G	rs4234209	A	G	A	Sox2_MA0143.3	-1	0	-	0	0	.
chr3	123029228	123029229	chr3:123029229:A:T	rs73859437	A	T	A	Sox2_MA0143.3	26	0	-	0	0	.
chr3	123058712	123058713	chr3:123058713:C:T	rs59275099	C	T	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr3	123064648	123064649	chr3:123064649:C:T	rs114573129	C	T	C	Sox2_MA0143.3	16	0	-	0	0	.
chr3	123091128	123091129	chr3:123091129:A:T	rs11714064	A	T	T	Sox2_MA0143.3	-11	0	-	0	0	.
chr3	123101384	123101385	chr3:123101385:G:A	rs2667468	G	A	G	Sox2_MA0143.3	15	0	+	0	0	.
chr3	123109901	123109902	chr3:123109902:T:C	rs2589596	T	C	T	Sox2_MA0143.3	-20	0	+	0	0	.
chr3	123122946	123122947	chr3:123122947:G:T	rs836853	G	T	T	Sox2_MA0143.3	12	0	+	0	0	.
chr3	123126125	123126126	chr3:123126126:A:G	rs836856	A	G	G	Sox2_MA0143.3	21	0	-	0	0	.
chr3	123129429	123129430	chr3:123129430:T:C	rs702029	T	C	G	Sox2_MA0143.3	-14	0	+	0	0	.
chr3	123156330	123156331	chr3:123156331:G:A	rs116742795	G	A	G	Sox2_MA0143.3	27	0	+	0	0	.
chr3	123194870	123194871	chr3:123194871:A:G	rs78451350	A	G	A	Sox2_MA0143.3	-20	0	-	0	0	.
chr3	123273055	123273056	chr3:123273056:G:A	rs6788538	G	A	A	Sox2_MA0143.3	-9	0	+	0	0	.
chr3	123299178	123299179	chr3:123299179:T:G	rs59508443	T	G	G	Sox2_MA0143.3	24	0	-	0	0	.
chr3	123345455	123345456	chr3:123345456:A:C	rs553775335	A	C	A	Sox2_MA0143.3	-1	0	+	0	0	.
chr3	123345468	123345469	chr3:123345469:C:G	rs976306702	C	G	C	Sox2_MA0143.3	12	0	+	0	0	.
chr3	123345469	123345470	chr3:123345470:G:A	rs76422162	G	A	G	Sox2_MA0143.3	13	0	+	0	0	.
chr3	123345476	123345477	chr3:123345477:G:A	rs138917757	G	A	G	Sox2_MA0143.3	20	0	+	0	0	.
chr3	123366250	123366251	chr3:123366251:G:A	rs6781704	G	A	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr3	123384864	123384865	chr3:123384865:C:A	rs6790843	C	A	C	Sox2_MA0143.3	24	0	+	0	0	.
chr3	123476592	123476593	chr3:123476593:A:G	rs9817717	A	G	G	Sox2_MA0143.3	16	0	+	0	0	.
chr3	123477098	123477099	chr3:123477099:G:A	rs4677896	G	A	g	Sox2_MA0143.3	5	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr3	123661615	123661616	chr3:123661616:G:C	rs1048837649	G	C	G	Sox2_MA0143.3	22	0	-	0	0	.
chr3	123695581	123695582	chr3:123695582:T:C	rs2605419	T	C	C	Sox2_MA0143.3	25	0	-	0	0	.
chr3	123723460	123723461	chr3:123723461:A:G	rs113695387	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr3	123732390	123732391	chr3:123732391:T:C	rs6776430	T	C	T	Sox2_MA0143.3	10	0	-	0	0	.
chr3	123814243	123814244	chr3:123814244:C:T	rs536613647	C	T	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr3	123819206	123819207	chr3:123819207:G:A	rs117751546	G	A	G	Sox2_MA0143.3	11	0	+	0	0	.
chr3	123832924	123832925	chr3:123832925:A:G	rs2700354	A	G	A	Sox2_MA0143.3	24	0	-	0	0	.
chr3	123873148	123873149	chr3:123873149:C:T	rs141381505	C	T	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr3	123916365	123916366	chr3:123916366:A:G	rs67028142	A	G	A	Sox2_MA0143.3	20	0	-	0	0	.
chr3	123953530	123953531	chr3:123953531:C:T	rs2700357	C	T	T	Sox2_MA0143.3	18	0	+	0	0	.
chr3	123953939	123953940	chr3:123953940:T:C	rs62263719	T	C	T	Sox2_MA0143.3	-8	0	+	0	0	.
chr3	123977069	123977070	chr3:123977070:A:G	rs112968417	A	G	A	Sox2_MA0143.3	-19	0	+	0	0	.
chr3	124031425	124031426	chr3:124031426:C:T	rs1178174850	C	T	C	Sox2_MA0143.3	10	0	-	0	0	.
chr3	124094621	124094622	chr3:124094622:G:A	rs150214123	G	A	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr3	124152349	124152350	chr3:124152350:C:T	rs28402839	C	T	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr3	124168920	124168921	chr3:124168921:A:G	rs17285457	A	G	A	Sox2_MA0143.3	-4	0	-	0	0	.
chr3	124224102	124224103	chr3:124224103:A:G	rs9876173	A	G	A	Sox2_MA0143.3	23	0	+	0	0	.
chr3	124255849	124255850	chr3:124255850:G:A	rs12152377	G	A	G	Sox2_MA0143.3	16	0	-	0	0	.
chr3	124535590	124535591	chr3:124535591:T:G	rs12485363	T	G	T	Sox2_MA0143.3	20	0	+	0	0	.
chr3	124583322	124583323	chr3:124583323:A:G	rs4678141	A	G	A	Sox2_MA0143.3	8	0	-	0	0	.
chr3	124584406	124584407	chr3:124584407:A:T	rs1875363	A	T	A	Sox2_MA0143.3	-17	0	+	0	0	.
chr3	124609583	124609584	chr3:124609584:G:A	rs62267607	G	A	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr3	124673038	124673039	chr3:124673039:T:G	rs73195562	T	G	T	Sox2_MA0143.3	-16	0	+	0	0	.
chr3	124684659	124684660	chr3:124684660:A:G	rs57876057	A	G	A	Sox2_MA0143.3	4	1	-	9.800647049772198	2.8918922704569785	CCTTTGTT
chr3	124686665	124686666	chr3:124686666:G:T	rs35816663	G	T	G	Sox2_MA0143.3	0	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr3	124730478	124730479	chr3:124730479:T:G	rs77018024	T	G	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr3	124730488	124730489	chr3:124730489:A:G	rs141501397	A	G	A	Sox2_MA0143.3	-14	0	-	0	0	.
chr3	124730491	124730492	chr3:124730492:T:C	rs17843775	T	C	T	Sox2_MA0143.3	-17	0	-	0	0	.
chr3	124752839	124752840	chr3:124752840:A:C	rs13323057	A	C	A	Sox2_MA0143.3	26	0	-	0	0	.
chr3	124777479	124777480	chr3:124777480:C:T	rs76718781	C	T	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr3	124809576	124809577	chr3:124809577:T:C	rs848788	T	C	C	Sox2_MA0143.3	2	1	-	8.676919043985553	2.5582713367092715	CCATTGTG
chr3	124829751	124829752	chr3:124829752:T:C	rs16836078	T	C	T	Sox2_MA0143.3	4	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr3	124879465	124879466	chr3:124879466:T:C	rs146966909	T	C	T	Sox2_MA0143.3	-18	0	-	0	0	.
chr3	124889131	124889132	chr3:124889132:C:T	rs61759458	C	T	C	Sox2_MA0143.3	27	0	-	0	0	.
chr3	124933037	124933038	chr3:124933038:C:T	rs78536881	C	T	C	Sox2_MA0143.3	0	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr3	124967888	124967889	chr3:124967889:C:A	rs3184121	C	A	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr3	124995930	124995931	chr3:124995931:T:C	rs9681003	T	C	T	Sox2_MA0143.3	-5	0	+	0	0	.
chr3	125002828	125002829	chr3:125002829:T:C	rs114977209	T	C	T	Sox2_MA0143.3	6	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr3	125012080	125012081	chr3:125012081:C:G	rs6438870	C	G	G	Sox2_MA0143.3	11	0	-	0	0	.
chr3	125024758	125024759	chr3:125024759:G:A	rs114339129	G	A	G	Sox2_MA0143.3	18	0	-	0	0	.
chr3	125045265	125045266	chr3:125045266:A:G	rs2981534	A	G	G	Sox2_MA0143.3	10	0	+	0	0	.
chr3	125054909	125054910	chr3:125054910:G:A	rs116269534	G	A	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr3	125063751	125063752	chr3:125063752:C:T	rs73189231	C	T	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr3	125070610	125070611	chr3:125070611:G:A	rs72980471	G	A	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr3	125119251	125119252	chr3:125119252:G:A	rs585058	G	A	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr3	125119252	125119253	chr3:125119253:A:G	rs11927069	A	G	A	Sox2_MA0143.3	-9	0	-	0	0	.
chr3	125147362	125147363	chr3:125147363:G:T	rs552800655	G	T	G	Sox2_MA0143.3	10	0	+	0	0	.
chr3	125191670	125191671	chr3:125191671:G:A	rs1464066	G	A	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr3	125207155	125207156	chr3:125207156:T:A	rs9815815	T	A	A	Sox2_MA0143.3	8	0	-	0	0	.
chr3	125350828	125350829	chr3:125350829:T:C	rs2333199	T	C	t	Sox2_MA0143.3	15	0	-	0	0	.
chr3	125353339	125353340	chr3:125353340:G:T	rs9851588	G	T	T	Sox2_MA0143.3	12	0	+	0	0	.
chr3	125452524	125452525	chr3:125452525:C:T	rs7618658	C	T	C	Sox2_MA0143.3	12	0	-	0	0	.
chr3	125595808	125595809	chr3:125595809:A:G	rs978319944	A	G	A	Sox2_MA0143.3	-18	0	-	0	0	.
chr3	125643288	125643289	chr3:125643289:G:A	rs73190666	G	A	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr3	125719434	125719435	chr3:125719435:C:T	rs2947619	C	T	.	Sox2_MA0143.3	-5	0	+	0	0	.
chr3	125923445	125923446	chr3:125923446:T:C	rs111324805	T	C	.	Sox2_MA0143.3	26	0	+	0	0	.
chr3	125975473	125975474	chr3:125975474:T:C	rs763848313	T	C	T	Sox2_MA0143.3	-19	0	-	0	0	.
chr3	126022748	126022749	chr3:126022749:C:T	rs3817079	C	T	T	Sox2_MA0143.3	-5	0	+	0	0	.
chr3	126092612	126092613	chr3:126092613:G:A	rs147846582	G	A	G	Sox2_MA0143.3	-2	0	+	0	0	.
chr3	126092618	126092619	chr3:126092619:T:C	rs6438969	T	C	C	Sox2_MA0143.3	4	1	+	8.676919043985553	1.7681642646703322	CCATTGTG
chr3	126101825	126101826	chr3:126101826:A:G	rs4646767	A	G	a	Sox2_MA0143.3	-14	0	-	0	0	.
chr3	126125731	126125732	chr3:126125732:A:G	rs139520845	A	G	A	Sox2_MA0143.3	-11	0	+	0	0	.
chr3	126235825	126235826	chr3:126235826:C:G	rs62264474	C	G	G	Sox2_MA0143.3	15	0	-	0	0	.
chr3	126295532	126295533	chr3:126295533:C:T	rs55840060	C	T	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr3	126394848	126394849	chr3:126394849:C:T	rs988505928	C	T	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr3	126394859	126394860	chr3:126394860:G:A	rs56136817	G	A	G	Sox2_MA0143.3	5	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr3	126439623	126439624	chr3:126439624:A:C	rs778587961	A	C	A	Sox2_MA0143.3	-11	0	-	0	0	.
chr3	126447035	126447036	chr3:126447036:G:A	rs17690666	G	A	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr3	126467660	126467661	chr3:126467661:G:A	rs777496	G	A	A	Sox2_MA0143.3	25	0	-	0	0	.
chr3	126497351	126497352	chr3:126497352:C:T	rs115957934	C	T	C	Sox2_MA0143.3	27	0	-	0	0	.
chr3	126497372	126497373	chr3:126497373:A:G	rs16837521	A	G	G	Sox2_MA0143.3	6	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr3	126512343	126512344	chr3:126512344:A:G	rs1168593	A	G	A	Sox2_MA0143.3	6	1	-	9.613475778572903	2.7047209992576837	CCATTGTT
chr3	126552981	126552982	chr3:126552982:C:T	rs9863024	C	T	C	Sox2_MA0143.3	-5	0	-	0	0	.
chr3	126554651	126554652	chr3:126554652:C:A	rs78048535	C	A	C	Sox2_MA0143.3	0	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr3	126571193	126571194	chr3:126571194:C:T	chr3:126571194:C:T	C	T	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr3	126687396	126687397	chr3:126687397:G:A	rs9832518	G	A	G	Sox2_MA0143.3	-5	0	+	0	0	.
chr3	126784414	126784415	chr3:126784415:G:A	rs1050666104	G	A	G	Sox2_MA0143.3	5	1	+	8.676919043985553	1.7681642646703324	CCATTGTG
chr3	126913847	126913848	chr3:126913848:G:T	rs56670818	G	T	G	Sox2_MA0143.3	8	0	+	0	0	.
chr3	126925967	126925968	chr3:126925968:A:G	rs115233956	A	G	A	Sox2_MA0143.3	13	0	-	0	0	.
chr3	126991626	126991627	chr3:126991627:C:T	rs45560034	C	T	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr3	127018382	127018383	chr3:127018383:C:T	rs768079604	C	T	C	Sox2_MA0143.3	16	0	+	0	0	.
chr3	127047492	127047493	chr3:127047493:C:A	rs141207280	C	A	C	Sox2_MA0143.3	1	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr3	127077657	127077658	chr3:127077658:A:T	rs7626359	A	T	A	Sox2_MA0143.3	-2	0	+	0	0	.
chr3	127077673	127077674	chr3:127077674:A:G	rs150443245	A	G	A	Sox2_MA0143.3	14	0	+	0	0	.
chr3	127078989	127078990	chr3:127078990:G:A	rs62263353	G	A	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr3	127104952	127104953	chr3:127104953:C:A	rs11714163	C	A	C	Sox2_MA0143.3	22	0	+	0	0	.
chr3	127116280	127116281	chr3:127116281:C:T	rs17752844	C	T	C	Sox2_MA0143.3	-5	0	-	0	0	.
chr3	127120592	127120593	chr3:127120593:A:G	rs74892896	A	G	A	Sox2_MA0143.3	-19	0	+	0	0	.
chr3	127164661	127164662	chr3:127164662:C:T	rs1482922	C	T	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr3	127169401	127169402	chr3:127169402:C:G	rs113945905	C	G	c	Sox2_MA0143.3	-14	0	+	0	0	.
chr3	127207099	127207100	chr3:127207100:G:A	rs112887034	G	A	G	Sox2_MA0143.3	22	0	+	0	0	.
chr3	127221497	127221498	chr3:127221498:G:C	rs113620761	G	C	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr3	127221940	127221941	chr3:127221941:C:T	rs10934807	C	T	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr3	127227495	127227496	chr3:127227496:G:A	rs732410	G	A	A	Sox2_MA0143.3	24	0	-	0	0	.
chr3	127341004	127341005	chr3:127341005:G:A	rs9637391	G	A	g	Sox2_MA0143.3	-2	0	+	0	0	.
chr3	127426850	127426851	chr3:127426851:T:C	rs12487492	T	C	T	Sox2_MA0143.3	-9	0	-	0	0	.
chr3	127450180	127450181	chr3:127450181:C:T	rs73201010	C	T	C	Sox2_MA0143.3	0	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr3	127455664	127455665	chr3:127455665:G:T	chr3:127455665:G:T	G	T	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr3	127455667	127455668	chr3:127455668:G:C	rs9824537	G	C	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr3	127462435	127462436	chr3:127462436:C:T	rs74561964	C	T	C	Sox2_MA0143.3	15	0	+	0	0	.
chr3	127483048	127483049	chr3:127483049:A:G	rs780622735	A	G	A	Sox2_MA0143.3	-5	0	+	0	0	.
chr3	127534686	127534687	chr3:127534687:G:A	rs74804982	G	A	G	Sox2_MA0143.3	11	0	-	0	0	.
chr3	127534709	127534710	chr3:127534710:G:A	rs6773160	G	A	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr3	127538702	127538703	chr3:127538703:C:A	rs2594206	C	A	A	Sox2_MA0143.3	-19	0	+	0	0	.
chr3	127651988	127651989	chr3:127651989:C:T	rs76852880	C	T	C	Sox2_MA0143.3	11	0	-	0	0	.
chr3	127700734	127700735	chr3:127700735:T:G	rs7633484	T	G	T	Sox2_MA0143.3	9	0	-	0	0	.
chr3	127747026	127747027	chr3:127747027:G:A	rs512726	G	A	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr3	127747050	127747051	chr3:127747051:G:A	rs112735440	G	A	G	Sox2_MA0143.3	7	1	+	8.864090315184848	3.5547341015215945	CCTTTGTG
chr3	127761629	127761630	chr3:127761630:G:T	rs7652615	G	T	T	Sox2_MA0143.3	-7	0	-	0	0	.
chr3	127809120	127809121	chr3:127809121:C:T	rs10934820	C	T	T	Sox2_MA0143.3	14	0	-	0	0	.
chr3	127815761	127815762	chr3:127815762:A:G	rs73862363	A	G	G	Sox2_MA0143.3	13	0	-	0	0	.
chr3	127843230	127843231	chr3:127843231:A:G	rs36067954	A	G	A	Sox2_MA0143.3	-4	0	+	0	0	.
chr3	127844658	127844659	chr3:127844659:A:G	rs140402682	A	G	A	Sox2_MA0143.3	12	0	-	0	0	.
chr3	127887042	127887043	chr3:127887043:C:T	rs4974452	C	T	T	Sox2_MA0143.3	-19	0	+	0	0	.
chr3	127887062	127887063	chr3:127887063:C:T	rs4974453	C	T	T	Sox2_MA0143.3	1	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr3	127915883	127915884	chr3:127915884:G:C	rs73860727	G	C	C	Sox2_MA0143.3	26	0	-	0	0	.
chr3	127954850	127954851	chr3:127954851:G:A	rs10512700	G	A	G	Sox2_MA0143.3	25	0	+	0	0	.
chr3	127966094	127966095	chr3:127966095:G:C	rs185761812	G	C	G	Sox2_MA0143.3	-16	0	-	0	0	.
chr3	128005889	128005890	chr3:128005890:A:G	rs6770337	A	G	G	Sox2_MA0143.3	23	0	-	0	0	.
chr3	128005907	128005908	chr3:128005908:C:G	rs6794938	C	G	G	Sox2_MA0143.3	5	1	-	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr3	128040370	128040371	chr3:128040371:T:A	rs1469658	T	A	A	Sox2_MA0143.3	-7	0	-	0	0	.
chr3	128061629	128061630	chr3:128061630:A:G	rs3774796	A	G	G	Sox2_MA0143.3	-16	0	-	0	0	.
chr3	128149477	128149478	chr3:128149478:C:T	rs73192979	C	T	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr3	128159572	128159573	chr3:128159573:G:A	rs2999048	G	A	A	Sox2_MA0143.3	18	0	-	0	0	.
chr3	128214359	128214360	chr3:128214360:G:C	rs11707297	G	C	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr3	128253684	128253685	chr3:128253685:C:G	rs2955092	C	G	C	Sox2_MA0143.3	18	0	+	0	0	.
chr3	128275316	128275317	chr3:128275317:G:A	rs2811529	G	A	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr3	128321051	128321052	chr3:128321052:G:A	rs11708733	G	A	G	Sox2_MA0143.3	0	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr3	128323432	128323433	chr3:128323433:C:G	rs72977305	C	G	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr3	128354580	128354581	chr3:128354581:G:C	rs572657004	G	C	G	Sox2_MA0143.3	5	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr3	128379063	128379064	chr3:128379064:T:C	rs72977359	T	C	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr3	128387439	128387440	chr3:128387440:A:G	rs1010786	A	G	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr3	128404942	128404943	chr3:128404943:G:A	rs2977564	G	A	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr3	128416795	128416796	chr3:128416796:G:C	rs13434245	G	C	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr3	128416795	128416796	chr3:128416796:G:T	chr3:128416796:G:T	G	T	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr3	128432974	128432975	chr3:128432975:C:G	rs189934575	C	G	C	Sox2_MA0143.3	21	0	+	0	0	.
chr3	128442063	128442064	chr3:128442064:G:A	rs2969249	G	A	G	Sox2_MA0143.3	18	0	-	0	0	.
chr3	128488946	128488947	chr3:128488947:A:T	rs117400123	A	T	A	Sox2_MA0143.3	-20	0	-	0	0	.
chr3	128492593	128492594	chr3:128492594:C:T	rs114165680	C	T	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr3	128493886	128493887	chr3:128493887:G:A	rs4857898	G	A	G	Sox2_MA0143.3	-3	0	-	0	0	.
chr3	128497742	128497743	chr3:128497743:A:G	chr3:128497743:A:G	A	G	A	Sox2_MA0143.3	4	1	-	9.206767037375712	2.2980122580604916	CCTTTGTC
chr3	128507203	128507204	chr3:128507204:G:A	rs35548916	G	A	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr3	128509550	128509551	chr3:128509551:G:A	rs4550835	G	A	A	Sox2_MA0143.3	24	0	-	0	0	.
chr3	128568843	128568844	chr3:128568844:A:G	rs2245626	A	G	G	Sox2_MA0143.3	26	0	-	0	0	.
chr3	128576053	128576054	chr3:128576054:C:T	rs2465354	C	T	C	Sox2_MA0143.3	14	0	+	0	0	.
chr3	128627370	128627371	chr3:128627371:G:A	rs2712371	G	A	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr3	128681567	128681568	chr3:128681568:A:G	rs114815515	A	G	.	Sox2_MA0143.3	-5	0	+	0	0	.
chr3	128723177	128723178	chr3:128723178:T:C	rs9847178	T	C	C	Sox2_MA0143.3	8	0	+	0	0	.
chr3	128748864	128748865	chr3:128748865:A:T	rs6789176	A	T	T	Sox2_MA0143.3	-3	0	-	0	0	.
chr3	128812959	128812960	chr3:128812960:A:G	rs115829469	A	G	A	Sox2_MA0143.3	19	0	+	0	0	.
chr3	128882206	128882207	chr3:128882207:A:G	rs789228	A	G	A	Sox2_MA0143.3	7	1	+	3.5547341015215945	8.864090315184848	CCTTTGTA
chr3	128913208	128913209	chr3:128913209:C:T	rs16852231	C	T	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr3	128950639	128950640	chr3:128950640:G:C	rs75526117	G	C	G	Sox2_MA0143.3	0	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr3	129021312	129021313	chr3:129021313:C:T	rs141039949	C	T	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr3	129030588	129030589	chr3:129030589:C:T	rs554377643	C	T	C	Sox2_MA0143.3	23	0	-	0	0	.
chr3	129054728	129054729	chr3:129054729:C:T	rs58286961	C	T	c	Sox2_MA0143.3	-10	0	-	0	0	.
chr3	129205317	129205318	chr3:129205318:C:T	rs893698071	C	T	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr3	129275861	129275862	chr3:129275862:T:C	rs57394273	T	C	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr3	129289459	129289460	chr3:129289460:T:C	rs4075182	T	C	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr3	129297030	129297031	chr3:129297031:A:C	rs58516720	A	C	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr3	129301934	129301935	chr3:129301935:A:G	rs6765930	A	G	G	Sox2_MA0143.3	10	0	+	0	0	.
chr3	129324181	129324182	chr3:129324182:G:C	rs9858960	G	C	C	Sox2_MA0143.3	18	0	+	0	0	.
chr3	129400078	129400079	chr3:129400079:A:G	rs7622524	A	G	a	Sox2_MA0143.3	11	0	+	0	0	.
chr3	129412938	129412939	chr3:129412939:C:T	rs60166811	C	T	C	Sox2_MA0143.3	9	0	+	0	0	.
chr3	129424308	129424309	chr3:129424309:A:G	rs4128192	A	G	A	Sox2_MA0143.3	-7	0	+	0	0	.
chr3	129461659	129461660	chr3:129461660:C:T	rs59068291	C	T	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr3	129468112	129468113	chr3:129468113:C:G	rs67320575	C	G	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr3	129502138	129502139	chr3:129502139:G:A	rs1872105	G	A	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr3	129530081	129530082	chr3:129530082:T:G	rs2855552	T	G	T	Sox2_MA0143.3	-5	0	+	0	0	.
chr3	129589252	129589253	chr3:129589253:G:A	rs13079843	G	A	.	Sox2_MA0143.3	-9	0	-	0	0	.
chr3	129599750	129599751	chr3:129599751:A:G	rs35947652	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr3	129612134	129612135	chr3:129612135:C:T	rs111631966	C	T	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr3	129612147	129612148	chr3:129612148:G:A	rs145646594	G	A	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr3	129626894	129626895	chr3:129626895:G:A	rs542241641	G	A	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr3	129626916	129626917	chr3:129626917:G:C	rs56293551	G	C	G	Sox2_MA0143.3	9	0	+	0	0	.
chr3	129732675	129732676	chr3:129732676:G:A	rs9867350	G	A	G	Sox2_MA0143.3	26	0	+	0	0	.
chr3	129795803	129795804	chr3:129795804:C:A	rs2811334	C	A	A	Sox2_MA0143.3	12	0	+	0	0	.
chr3	129809507	129809508	chr3:129809508:C:T	rs55668409	C	T	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr3	129932710	129932711	chr3:129932711:G:A	rs13316898	G	A	G	Sox2_MA0143.3	1	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr3	130027632	130027633	chr3:130027633:T:G	rs186648210	T	G	t	Sox2_MA0143.3	-20	0	-	0	0	.
chr3	130044037	130044038	chr3:130044038:A:G	rs2976102	A	G	a	Sox2_MA0143.3	18	0	-	0	0	.
chr3	130044054	130044055	chr3:130044055:G:C	rs73208686	G	C	g	Sox2_MA0143.3	1	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr3	130250973	130250974	chr3:130250974:A:G	rs6777871	A	G	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr3	130258930	130258931	chr3:130258931:G:A	rs935916	G	A	G	Sox2_MA0143.3	24	0	+	0	0	.
chr3	130386876	130386877	chr3:130386877:G:A	rs144883933	G	A	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr3	130411498	130411499	chr3:130411499:C:T	rs16827427	C	T	C	Sox2_MA0143.3	20	0	+	0	0	.
chr3	130441372	130441373	chr3:130441373:A:G	rs7652023	A	G	A	Sox2_MA0143.3	27	0	-	0	0	.
chr3	130793429	130793430	chr3:130793430:A:G	rs11925493	A	G	A	Sox2_MA0143.3	-12	0	-	0	0	.
chr3	131371560	131371561	chr3:131371561:G:T	rs189385624	G	T	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr3	131407418	131407419	chr3:131407419:G:C	rs12489575	G	C	G	Sox2_MA0143.3	1	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr3	131473269	131473270	chr3:131473270:T:C	rs13059882	T	C	T	Sox2_MA0143.3	16	0	-	0	0	.
chr3	131485357	131485358	chr3:131485358:G:A	rs55842720	G	A	g	Sox2_MA0143.3	-14	0	-	0	0	.
chr3	131807940	131807941	chr3:131807941:A:G	rs73875024	A	G	A	Sox2_MA0143.3	6	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr3	132006788	132006789	chr3:132006789:G:A	rs532749289	G	A	G	Sox2_MA0143.3	-16	0	-	0	0	.
chr3	132027582	132027583	chr3:132027583:A:C	rs7651726	A	C	a	Sox2_MA0143.3	4	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr3	132242987	132242988	chr3:132242988:C:T	rs7643950	C	T	T	Sox2_MA0143.3	1	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr3	132339610	132339611	chr3:132339611:T:C	rs55950941	T	C	C	Sox2_MA0143.3	15	0	-	0	0	.
chr3	132339625	132339626	chr3:132339626:G:T	rs309997	G	T	G	Sox2_MA0143.3	0	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr3	132347219	132347220	chr3:132347220:C:T	rs187082644	C	T	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr3	132499351	132499352	chr3:132499352:C:T	rs2088712	C	T	C	Sox2_MA0143.3	27	0	+	0	0	.
chr3	132563964	132563965	chr3:132563965:A:T	rs141543946	A	T	A	Sox2_MA0143.3	23	0	+	0	0	.
chr3	132726322	132726323	chr3:132726323:G:A	rs80155922	G	A	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr3	132772251	132772252	chr3:132772252:G:A	rs3849410	G	A	G	Sox2_MA0143.3	0	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr3	132833594	132833595	chr3:132833595:C:A	rs16839688	C	A	A	Sox2_MA0143.3	10	0	+	0	0	.
chr3	132869836	132869837	chr3:132869837:G:A	rs77094623	G	A	G	Sox2_MA0143.3	27	0	+	0	0	.
chr3	132937401	132937402	chr3:132937402:G:A	rs59727327	G	A	G	Sox2_MA0143.3	0	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr3	132957030	132957031	chr3:132957031:A:G	rs2369836	A	G	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr3	132972698	132972699	chr3:132972699:T:C	rs116517283	T	C	T	Sox2_MA0143.3	-7	0	+	0	0	.
chr3	133038150	133038151	chr3:133038151:C:T	rs192441406	C	T	C	Sox2_MA0143.3	19	0	+	0	0	.
chr3	133071841	133071842	chr3:133071842:T:G	rs4496483	T	G	T	Sox2_MA0143.3	-14	0	-	0	0	.
chr3	133118722	133118723	chr3:133118723:G:A	rs3811649	G	A	G	Sox2_MA0143.3	26	0	+	0	0	.
chr3	133292359	133292360	chr3:133292360:C:T	rs11922891	C	T	T	Sox2_MA0143.3	1	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr3	133292438	133292439	chr3:133292439:G:A	rs11922977	G	A	A	Sox2_MA0143.3	-18	0	+	0	0	.
chr3	133355657	133355658	chr3:133355658:G:A	rs35785369	G	A	G	Sox2_MA0143.3	9	0	-	0	0	.
chr3	133394773	133394774	chr3:133394774:T:C	chr3:133394774:T:C	T	C	T	Sox2_MA0143.3	14	0	-	0	0	.
chr3	133421263	133421264	chr3:133421264:G:T	rs57137941	G	T	T	Sox2_MA0143.3	0	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr3	133425763	133425764	chr3:133425764:T:C	rs10935061	T	C	T	Sox2_MA0143.3	-3	0	-	0	0	.
chr3	133444069	133444070	chr3:133444070:A:G	rs74932409	A	G	A	Sox2_MA0143.3	19	0	-	0	0	.
chr3	133460735	133460736	chr3:133460736:C:T	rs931099	C	T	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr3	133479925	133479926	chr3:133479926:C:A	rs1389937902	C	A	C	Sox2_MA0143.3	8	0	-	0	0	.
chr3	133570353	133570354	chr3:133570354:T:C	rs6439425	T	C	C	Sox2_MA0143.3	12	0	-	0	0	.
chr3	133593443	133593444	chr3:133593444:G:A	rs4854587	G	A	G	Sox2_MA0143.3	1	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr3	133597193	133597194	chr3:133597194:A:G	rs6765260	A	G	G	Sox2_MA0143.3	27	0	-	0	0	.
chr3	133700173	133700174	chr3:133700174:A:G	rs13071381	A	G	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr3	133729264	133729265	chr3:133729265:A:C	rs6439431	A	C	A	Sox2_MA0143.3	11	0	-	0	0	.
chr3	133838466	133838467	chr3:133838467:C:T	rs80192225	C	T	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr3	133839853	133839854	chr3:133839854:G:A	rs6765093	G	A	G	Sox2_MA0143.3	13	0	+	0	0	.
chr3	133844094	133844095	chr3:133844095:T:C	rs17310798	T	C	T	Sox2_MA0143.3	27	0	-	0	0	.
chr3	133881069	133881070	chr3:133881070:A:G	rs2715629	A	G	G	Sox2_MA0143.3	3	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr3	133916340	133916341	chr3:133916341:A:G	rs149100536	A	G	A	Sox2_MA0143.3	10	0	+	0	0	.
chr3	133926788	133926789	chr3:133926789:C:T	rs74743266	C	T	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr3	133930726	133930727	chr3:133930727:G:C	rs79249425	G	C	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr3	133945170	133945171	chr3:133945171:T:C	rs150345667	T	C	T	Sox2_MA0143.3	3	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr3	134012087	134012088	chr3:134012088:T:C	rs7629416	T	C	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr3	134028838	134028839	chr3:134028839:G:C	rs143565952	G	C	G	Sox2_MA0143.3	27	0	+	0	0	.
chr3	134059981	134059982	chr3:134059982:C:T	rs552298529	C	T	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr3	134066332	134066333	chr3:134066333:T:C	rs4546143	T	C	C	Sox2_MA0143.3	27	0	+	0	0	.
chr3	134133098	134133099	chr3:134133099:G:C	rs4854823	G	C	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr3	134133107	134133108	chr3:134133108:C:G	rs4854824	C	G	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr3	134306296	134306297	chr3:134306297:A:G	rs35369871	A	G	G	Sox2_MA0143.3	25	0	+	0	0	.
chr3	134328324	134328325	chr3:134328325:C:G	rs183549932	C	G	C	Sox2_MA0143.3	25	0	-	0	0	.
chr3	134334539	134334540	chr3:134334540:G:T	rs4974489	G	T	G	Sox2_MA0143.3	18	0	-	0	0	.
chr3	134364134	134364135	chr3:134364135:G:C	rs1006032167	G	C	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr3	134364153	134364154	chr3:134364154:T:C	rs140509999	T	C	T	Sox2_MA0143.3	15	0	+	0	0	.
chr3	134377577	134377578	chr3:134377578:G:A	rs142657177	G	A	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr3	134382598	134382599	chr3:134382599:G:A	rs35304308	G	A	G	Sox2_MA0143.3	26	0	-	0	0	.
chr3	134382994	134382995	chr3:134382995:G:A	rs9864334	G	A	G	Sox2_MA0143.3	0	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr3	134488002	134488003	chr3:134488003:G:A	rs9834755	G	A	A	Sox2_MA0143.3	5	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr3	134527023	134527024	chr3:134527024:A:G	rs2177602	A	G	A	Sox2_MA0143.3	4	1	-	8.676919043985553	1.7681642646703322	CCATTGTG
chr3	134598241	134598242	chr3:134598242:A:G	rs113125451	A	G	A	Sox2_MA0143.3	-15	0	+	0	0	.
chr3	134601214	134601215	chr3:134601215:G:A	rs531693660	G	A	G	Sox2_MA0143.3	24	0	-	0	0	.
chr3	134611531	134611532	chr3:134611532:T:G	rs9848254	T	G	G	Sox2_MA0143.3	23	0	+	0	0	.
chr3	134641865	134641866	chr3:134641866:G:T	rs114977614	G	T	G	Sox2_MA0143.3	5	1	+	9.206767037375712	2.298012258060492	CCTTTGTC
chr3	134750688	134750689	chr3:134750689:T:A	rs10935129	T	A	T	Sox2_MA0143.3	-17	0	-	0	0	.
chr3	134781482	134781483	chr3:134781483:A:G	rs58989811	A	G	A	Sox2_MA0143.3	-11	0	-	0	0	.
chr3	134917953	134917954	chr3:134917954:T:C	rs36198	T	C	c	Sox2_MA0143.3	3	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr3	135015886	135015887	chr3:135015887:A:C	rs1013686326	A	C	A	Sox2_MA0143.3	20	0	-	0	0	.
chr3	135103073	135103074	chr3:135103074:A:G	rs56144410	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr3	135106254	135106255	chr3:135106255:A:T	rs9866494	A	T	a	Sox2_MA0143.3	15	0	-	0	0	.
chr3	135148811	135148812	chr3:135148812:T:C	rs77767316	T	C	T	Sox2_MA0143.3	-2	0	+	0	0	.
chr3	135158412	135158413	chr3:135158413:A:G	rs931375679	A	G	A	Sox2_MA0143.3	7	1	+	3.5547341015215945	8.864090315184848	CCTTTGTA
chr3	135216810	135216811	chr3:135216811:A:G	rs34744364	A	G	g	Sox2_MA0143.3	-7	0	+	0	0	.
chr3	135216830	135216831	chr3:135216831:T:C	rs28707535	T	C	c	Sox2_MA0143.3	13	0	+	0	0	.
chr3	135514395	135514396	chr3:135514396:C:A	rs73229931	C	A	C	Sox2_MA0143.3	16	0	+	0	0	.
chr3	135538572	135538573	chr3:135538573:G:A	rs17247300	G	A	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr3	135636928	135636929	chr3:135636929:T:C	rs1447596	T	C	T	Sox2_MA0143.3	17	0	+	0	0	.
chr3	135742812	135742813	chr3:135742813:G:A	rs9851816	G	A	G	Sox2_MA0143.3	27	0	-	0	0	.
chr3	135896248	135896249	chr3:135896249:C:T	rs111364127	C	T	C	Sox2_MA0143.3	20	0	-	0	0	.
chr3	135896260	135896261	chr3:135896261:G:T	rs113720292	G	T	G	Sox2_MA0143.3	8	0	-	0	0	.
chr3	135923661	135923662	chr3:135923662:T:C	rs16843509	T	C	C	Sox2_MA0143.3	19	0	+	0	0	.
chr3	135994912	135994913	chr3:135994913:C:G	rs16843611	C	G	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr3	135994926	135994927	chr3:135994927:T:C	rs6786769	T	C	C	Sox2_MA0143.3	9	0	+	0	0	.
chr3	136072042	136072043	chr3:136072043:C:T	rs35773450	C	T	T	Sox2_MA0143.3	14	0	+	0	0	.
chr3	136135357	136135358	chr3:136135358:A:G	rs75481518	A	G	A	Sox2_MA0143.3	-3	0	-	0	0	.
chr3	136135358	136135359	chr3:136135359:G:A	rs1393787	G	A	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr3	136136799	136136800	chr3:136136800:G:T	rs79966407	G	T	G	Sox2_MA0143.3	-5	0	+	0	0	.
chr3	136634688	136634689	chr3:136634689:C:T	rs78916444	C	T	C	Sox2_MA0143.3	-12	0	-	0	0	.
chr3	136724160	136724161	chr3:136724161:A:G	rs7632309	A	G	-	Sox2_MA0143.3	-20	0	-	0	0	.
chr3	136864143	136864144	chr3:136864144:C:T	rs6777816	C	T	t	Sox2_MA0143.3	1	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr3	136933291	136933292	chr3:136933292:A:G	rs73231966	A	G	A	Sox2_MA0143.3	3	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr3	136938516	136938517	chr3:136938517:T:C	rs77203258	T	C	T	Sox2_MA0143.3	17	0	+	0	0	.
chr3	137081878	137081879	chr3:137081879:C:A	rs1351892	C	A	C	Sox2_MA0143.3	22	0	+	0	0	.
chr3	137134619	137134620	chr3:137134620:T:G	rs4678226	T	G	G	Sox2_MA0143.3	27	0	+	0	0	.
chr3	137139036	137139037	chr3:137139037:T:C	rs13080243	T	C	T	Sox2_MA0143.3	-12	0	+	0	0	.
chr3	137139065	137139066	chr3:137139066:A:T	rs13100239	A	T	A	Sox2_MA0143.3	17	0	+	0	0	.
chr3	137513998	137513999	chr3:137513999:G:C	rs9824385	G	C	G	Sox2_MA0143.3	21	0	+	0	0	.
chr3	137763952	137763953	chr3:137763953:C:T	rs66578728	C	T	C	Sox2_MA0143.3	1	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr3	137767519	137767520	chr3:137767520:G:A	rs11925482	G	A	G	Sox2_MA0143.3	-5	0	+	0	0	.
chr3	137767522	137767523	chr3:137767523:C:A	rs181695705	C	A	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr3	137867217	137867218	chr3:137867218:C:T	rs78587283	C	T	C	Sox2_MA0143.3	19	0	+	0	0	.
chr3	138047986	138047987	chr3:138047987:T:C	rs329139	T	C	T	Sox2_MA0143.3	23	0	+	0	0	.
chr3	138061144	138061145	chr3:138061145:G:C	rs9814877	G	C	C	Sox2_MA0143.3	9	0	+	0	0	.
chr3	138339072	138339073	chr3:138339073:A:G	rs2169973	A	G	G	Sox2_MA0143.3	20	0	+	0	0	.
chr3	138357174	138357175	chr3:138357175:G:A	rs3773757	G	A	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr3	138513100	138513101	chr3:138513101:C:T	rs963721291	C	T	C	Sox2_MA0143.3	21	0	-	0	0	.
chr3	138594840	138594841	chr3:138594841:C:G	rs146560881	C	G	C	Sox2_MA0143.3	15	0	+	0	0	.
chr3	138594850	138594851	chr3:138594851:C:A	rs141206666	C	A	C	Sox2_MA0143.3	25	0	+	0	0	.
chr3	138673645	138673646	chr3:138673646:C:G	rs361097	C	G	C	Sox2_MA0143.3	5	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr3	138776893	138776894	chr3:138776894:T:A	rs361067	T	A	A	Sox2_MA0143.3	3	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr3	139121237	139121238	chr3:139121238:A:G	rs6790703	A	G	G	Sox2_MA0143.3	-3	0	+	0	0	.
chr3	139138003	139138004	chr3:139138004:T:C	rs13075329	T	C	T	Sox2_MA0143.3	13	0	+	0	0	.
chr3	139506857	139506858	chr3:139506858:C:T	rs4563370	C	T	T	Sox2_MA0143.3	-13	0	-	0	0	.
chr3	139539858	139539859	chr3:139539859:G:A	rs78951017	G	A	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr3	139559741	139559742	chr3:139559742:C:G	rs76298519	C	G	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr3	139560430	139560431	chr3:139560431:A:G	rs295505	A	G	G	Sox2_MA0143.3	24	0	-	0	0	.
chr3	139787549	139787550	chr3:139787550:A:G	rs62271890	A	G	A	Sox2_MA0143.3	-5	0	+	0	0	.
chr3	140336861	140336862	chr3:140336862:G:A	rs999820	G	A	t	Sox2_MA0143.3	-15	0	-	0	0	.
chr3	140432377	140432378	chr3:140432378:A:T	rs347337	A	T	a	Sox2_MA0143.3	14	0	-	0	0	.
chr3	140449917	140449918	chr3:140449918:C:T	rs2114859	C	T	C	Sox2_MA0143.3	12	0	-	0	0	.
chr3	140466524	140466525	chr3:140466525:G:A	rs9631463	G	A	G	Sox2_MA0143.3	19	0	+	0	0	.
chr3	140537192	140537193	chr3:140537193:A:C	rs16850442	A	C	C	Sox2_MA0143.3	19	0	-	0	0	.
chr3	140686811	140686812	chr3:140686812:C:T	rs698675	C	T	C	Sox2_MA0143.3	17	0	-	0	0	.
chr3	140712054	140712055	chr3:140712055:G:A	rs151127069	G	A	G	Sox2_MA0143.3	5	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr3	140737252	140737253	chr3:140737253:C:T	rs6791079	C	T	T	Sox2_MA0143.3	14	0	-	0	0	.
chr3	140950982	140950983	chr3:140950983:G:A	rs9845648	G	A	G	Sox2_MA0143.3	13	0	+	0	0	.
chr3	141008000	141008001	chr3:141008001:G:A	rs4583620	G	A	G	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr3	141104746	141104747	chr3:141104747:G:A	rs112300843	G	A	G	Sox2_MA0143.3	13	0	+	0	0	.
chr3	141110579	141110580	chr3:141110580:T:C	rs3940907	T	C	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr3	141228645	141228646	chr3:141228646:G:A	rs2291041	G	A	G	Sox2_MA0143.3	9	0	-	0	0	.
chr3	141232881	141232882	chr3:141232882:G:T	rs9876155	G	T	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr3	141243637	141243638	chr3:141243638:C:T	rs11710222	C	T	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr3	141276198	141276199	chr3:141276199:C:T	rs6772725	C	T	T	Sox2_MA0143.3	-14	0	+	0	0	.
chr3	141276222	141276223	chr3:141276223:G:A	rs6772975	G	A	G	Sox2_MA0143.3	10	0	+	0	0	.
chr3	141323982	141323983	chr3:141323983:C:G	rs74561820	C	G	C	Sox2_MA0143.3	1	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr3	141350939	141350940	chr3:141350940:G:A	rs13092660	G	A	A	Sox2_MA0143.3	-20	0	+	0	0	.
chr3	141356119	141356120	chr3:141356120:G:A	rs13095453	G	A	G	Sox2_MA0143.3	0	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr3	141412864	141412865	chr3:141412865:G:A	rs75092195	G	A	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr3	141426758	141426759	chr3:141426759:C:A	rs79153193	C	A	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr3	141432111	141432112	chr3:141432112:C:T	rs721338	C	T	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr3	141432147	141432148	chr3:141432148:G:A	rs6789653	G	A	G	Sox2_MA0143.3	20	0	+	0	0	.
chr3	141486001	141486002	chr3:141486002:G:C	rs3806646	G	C	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr3	141630538	141630539	chr3:141630539:C:T	rs2677420	C	T	C	Sox2_MA0143.3	22	0	+	0	0	.
chr3	141684925	141684926	chr3:141684926:T:G	rs925859	T	G	G	Sox2_MA0143.3	15	0	+	0	0	.
chr3	141696909	141696910	chr3:141696910:C:T	rs61489491	C	T	C	Sox2_MA0143.3	24	0	+	0	0	.
chr3	141709021	141709022	chr3:141709022:C:T	rs9875298	C	T	T	Sox2_MA0143.3	-4	0	+	0	0	.
chr3	141830678	141830679	chr3:141830679:C:T	rs1045068061	C	T	C	Sox2_MA0143.3	21	0	-	0	0	.
chr3	141853200	141853201	chr3:141853201:G:A	rs16851872	G	A	G	Sox2_MA0143.3	25	0	+	0	0	.
chr3	141877293	141877294	chr3:141877294:C:G	rs1033048389	C	G	C	Sox2_MA0143.3	15	0	+	0	0	.
chr3	141878601	141878602	chr3:141878602:G:A	rs61352893	G	A	G	Sox2_MA0143.3	21	0	+	0	0	.
chr3	141934283	141934284	chr3:141934284:A:C	rs745966	A	C	A	Sox2_MA0143.3	-1	0	-	0	0	.
chr3	141945652	141945653	chr3:141945653:T:C	rs68082651	T	C	T	Sox2_MA0143.3	-5	0	+	0	0	.
chr3	141949304	141949305	chr3:141949305:T:A	rs77409449	T	A	A	Sox2_MA0143.3	-6	0	+	0	0	.
chr3	142073588	142073589	chr3:142073589:G:A	rs73232677	G	A	g	Sox2_MA0143.3	-11	0	-	0	0	.
chr3	142086545	142086546	chr3:142086546:G:A	rs347682	G	A	A	Sox2_MA0143.3	-3	0	-	0	0	.
chr3	142086949	142086950	chr3:142086950:C:T	rs73233852	C	T	T	Sox2_MA0143.3	20	0	-	0	0	.
chr3	142117277	142117278	chr3:142117278:A:G	chr3:142117278:A:G	A	G	A	Sox2_MA0143.3	-16	0	-	0	0	.
chr3	142117344	142117345	chr3:142117345:G:C	rs73872578	G	C	G	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr3	142213776	142213777	chr3:142213777:T:A	rs11926921	T	A	T	Sox2_MA0143.3	27	0	-	0	0	.
chr3	142930267	142930268	chr3:142930268:C:G	rs9832727	C	G	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr3	142944122	142944123	chr3:142944123:T:A	rs75301912	T	A	T	Sox2_MA0143.3	-18	0	+	0	0	.
chr3	142944129	142944130	chr3:142944130:T:G	rs4683712	T	G	G	Sox2_MA0143.3	-11	0	+	0	0	.
chr3	143070930	143070931	chr3:143070931:G:T	rs143410229	G	T	G	Sox2_MA0143.3	13	0	+	0	0	.
chr3	143125287	143125288	chr3:143125288:G:A	rs16852995	G	A	A	Sox2_MA0143.3	-11	0	+	0	0	.
chr3	143129800	143129801	chr3:143129801:A:G	rs4683452	A	G	G	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr3	143129815	143129816	chr3:143129816:A:G	rs115966363	A	G	A	Sox2_MA0143.3	-12	0	-	0	0	.
chr3	143237105	143237106	chr3:143237106:A:C	rs56045104	A	C	A	Sox2_MA0143.3	-4	0	+	0	0	.
chr3	143271088	143271089	chr3:143271089:A:G	rs7620673	A	G	A	Sox2_MA0143.3	-9	0	+	0	0	.
chr3	143310247	143310248	chr3:143310248:C:A	rs7431684	C	A	g	Sox2_MA0143.3	5	1	-	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr3	143351469	143351470	chr3:143351470:C:T	rs6765636	C	T	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr3	143358364	143358365	chr3:143358365:G:T	rs533544774	G	T	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr3	143479959	143479960	chr3:143479960:C:T	rs838636	C	T	C	Sox2_MA0143.3	13	0	+	0	0	.
chr3	143481286	143481287	chr3:143481287:C:T	rs10513205	C	T	C	Sox2_MA0143.3	17	0	-	0	0	.
chr3	143595721	143595722	chr3:143595722:G:C	rs10513212	G	C	G	Sox2_MA0143.3	1	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr3	143671695	143671696	chr3:143671696:T:C	rs148999308	T	C	T	Sox2_MA0143.3	16	0	+	0	0	.
chr3	143763273	143763274	chr3:143763274:C:T	rs77716158	C	T	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr3	143772069	143772070	chr3:143772070:G:T	rs2166776	G	T	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr3	143840465	143840466	chr3:143840466:C:G	rs16854458	C	G	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr3	143928997	143928998	chr3:143928998:C:T	rs1354496	C	T	C	Sox2_MA0143.3	25	0	+	0	0	.
chr3	144037344	144037345	chr3:144037345:C:G	rs1025984	C	G	G	Sox2_MA0143.3	24	0	-	0	0	.
chr3	144496673	144496674	chr3:144496674:A:G	rs7641994	A	G	G	Sox2_MA0143.3	12	0	-	0	0	.
chr3	144503679	144503680	chr3:144503680:G:T	rs4290842	G	T	G	Sox2_MA0143.3	16	0	-	0	0	.
chr3	145383453	145383454	chr3:145383454:G:A	rs73155248	G	A	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr3	145623823	145623824	chr3:145623824:C:T	rs2204632	C	T	C	Sox2_MA0143.3	13	0	-	0	0	.
chr3	145953493	145953494	chr3:145953494:T:C	rs62272606	T	C	T	Sox2_MA0143.3	-5	0	+	0	0	.
chr3	145993311	145993312	chr3:145993312:T:C	rs516129	T	C	c	Sox2_MA0143.3	-2	0	-	0	0	.
chr3	146092620	146092621	chr3:146092621:G:A	rs3804664	G	A	G	Sox2_MA0143.3	9	0	+	0	0	.
chr3	146200755	146200756	chr3:146200756:T:C	rs34363776	T	C	T	Sox2_MA0143.3	22	0	-	0	0	.
chr3	146243758	146243759	chr3:146243759:C:A	rs74949294	C	A	A	Sox2_MA0143.3	18	0	+	0	0	.
chr3	146317015	146317016	chr3:146317016:C:T	rs2221850	C	T	C	Sox2_MA0143.3	9	0	+	0	0	.
chr3	146343793	146343794	chr3:146343794:A:G	rs2137227	A	G	G	Sox2_MA0143.3	6	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr3	146403384	146403385	chr3:146403385:G:C	rs12629420	G	C	C	Sox2_MA0143.3	26	0	-	0	0	.
chr3	146473110	146473111	chr3:146473111:T:C	rs10935633	T	C	T	Sox2_MA0143.3	2	1	+	8.864090315184848	2.5582713367092715	CCTTTGTG
chr3	146498304	146498305	chr3:146498305:C:G	rs528049537	C	G	G	Sox2_MA0143.3	23	0	-	0	0	.
chr3	146498344	146498345	chr3:146498345:T:C	rs112731413	T	C	T	Sox2_MA0143.3	-17	0	-	0	0	.
chr3	146506943	146506944	chr3:146506944:A:G	rs79960433	A	G	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr3	146525132	146525133	chr3:146525133:C:T	rs2587029	C	T	C	Sox2_MA0143.3	25	0	-	0	0	.
chr3	146525173	146525174	chr3:146525174:C:T	rs2587028	C	T	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr3	146550958	146550959	chr3:146550959:T:C	rs75173624	T	C	T	Sox2_MA0143.3	-16	0	-	0	0	.
chr3	146626726	146626727	chr3:146626727:C:G	rs13434283	C	G	C	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr3	146904269	146904270	chr3:146904270:G:C	rs6772138	G	C	g	Sox2_MA0143.3	17	0	-	0	0	.
chr3	146972833	146972834	chr3:146972834:G:A	rs78442204	G	A	T	Sox2_MA0143.3	23	0	+	0	0	.
chr3	147322768	147322769	chr3:147322769:A:C	rs13319698	A	C	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr3	147428519	147428520	chr3:147428520:C:T	rs74587605	C	T	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr3	147620856	147620857	chr3:147620857:C:A	rs4331642	C	A	A	Sox2_MA0143.3	1	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr3	147735803	147735804	chr3:147735804:A:G	rs73151970	A	G	A	Sox2_MA0143.3	-5	0	-	0	0	.
chr3	148069803	148069804	chr3:148069804:C:T	rs1870000	C	T	T	Sox2_MA0143.3	-10	0	-	0	0	.
chr3	148150338	148150339	chr3:148150339:A:C	rs10513332	A	C	A	Sox2_MA0143.3	2	1	-	9.206767037375712	2.900948058900136	CCTTTGTC
chr3	148226421	148226422	chr3:148226422:A:G	rs66937511	A	G	A	Sox2_MA0143.3	-2	0	-	0	0	.
chr3	148311733	148311734	chr3:148311734:A:G	rs6782710	A	G	G	Sox2_MA0143.3	6	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr3	148763994	148763995	chr3:148763995:A:G	rs16860866	A	G	A	Sox2_MA0143.3	3	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr3	148790537	148790538	chr3:148790538:T:G	rs13072746	T	G	T	Sox2_MA0143.3	-7	0	-	0	0	.
chr3	148907039	148907040	chr3:148907040:G:A	rs4352341	G	A	A	Sox2_MA0143.3	-14	0	-	0	0	.
chr3	149018426	149018427	chr3:149018427:C:G	rs3772570	C	G	G	Sox2_MA0143.3	8	0	+	0	0	.
chr3	149124856	149124857	chr3:149124857:C:T	rs9855625	C	T	C	Sox2_MA0143.3	5	1	-	9.613475778572903	2.7047209992576837	CCATTGTT
chr3	149195338	149195339	chr3:149195339:G:T	rs13072552	G	T	g	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr3	149222141	149222142	chr3:149222142:G:A	rs34334174	G	A	G	Sox2_MA0143.3	27	0	+	0	0	.
chr3	149373475	149373476	chr3:149373476:C:T	rs56101739	C	T	C	Sox2_MA0143.3	26	0	-	0	0	.
chr3	149437881	149437882	chr3:149437882:G:T	rs75913374	G	T	G	Sox2_MA0143.3	26	0	+	0	0	.
chr3	149437882	149437883	chr3:149437883:G:T	rs77687051	G	T	G	Sox2_MA0143.3	27	0	+	0	0	.
chr3	149489464	149489465	chr3:149489465:A:C	rs75559381	A	C	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr3	149558898	149558899	chr3:149558899:A:G	rs35451362	A	G	A	Sox2_MA0143.3	-3	0	-	0	0	.
chr3	149559710	149559711	chr3:149559711:A:T	rs713371	A	T	T	Sox2_MA0143.3	23	0	+	0	0	.
chr3	149562647	149562648	chr3:149562648:A:G	rs7623720	A	G	G	Sox2_MA0143.3	3	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr3	149603542	149603543	chr3:149603543:G:A	rs7631676	G	A	G	Sox2_MA0143.3	0	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr3	149603555	149603556	chr3:149603556:C:T	rs111737492	C	T	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr3	149707445	149707446	chr3:149707446:C:T	rs77509560	C	T	C	Sox2_MA0143.3	0	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr3	149707985	149707986	chr3:149707986:T:C	rs4681549	T	C	T	Sox2_MA0143.3	-5	0	+	0	0	.
chr3	149859173	149859174	chr3:149859174:G:T	rs1522239	G	T	T	Sox2_MA0143.3	10	0	-	0	0	.
chr3	149899046	149899047	chr3:149899047:G:A	rs371754014	G	A	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr3	149908914	149908915	chr3:149908915:A:C	rs115729675	A	C	A	Sox2_MA0143.3	-14	0	-	0	0	.
chr3	150018991	150018992	chr3:150018992:G:T	rs1379484	G	T	G	Sox2_MA0143.3	24	0	-	0	0	.
chr3	150018992	150018993	chr3:150018993:A:T	rs1379483	A	T	A	Sox2_MA0143.3	23	0	-	0	0	.
chr3	150110337	150110338	chr3:150110338:T:G	rs7637136	T	G	T	Sox2_MA0143.3	-2	0	+	0	0	.
chr3	150221036	150221037	chr3:150221037:C:G	rs147836136	C	G	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr3	150250212	150250213	chr3:150250213:A:G	rs9813089	A	G	A	Sox2_MA0143.3	-13	0	+	0	0	.
chr3	150317627	150317628	chr3:150317628:T:C	rs7640638	T	C	T	Sox2_MA0143.3	-19	0	+	0	0	.
chr3	150348752	150348753	chr3:150348753:T:A	rs62271373	T	A	T	Sox2_MA0143.3	10	0	-	0	0	.
chr3	150371697	150371698	chr3:150371698:C:T	rs78213229	C	T	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr3	150436373	150436374	chr3:150436374:G:A	rs147686977	G	A	g	Sox2_MA0143.3	-12	0	-	0	0	.
chr3	150458036	150458037	chr3:150458037:C:T	rs34419133	C	T	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr3	150599166	150599167	chr3:150599167:G:C	rs1915943	G	C	G	Sox2_MA0143.3	27	0	+	0	0	.
chr3	150697710	150697711	chr3:150697711:T:G	rs6440693	T	G	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr3	150898191	150898192	chr3:150898192:T:C	rs16863001	T	C	C	Sox2_MA0143.3	25	0	+	0	0	.
chr3	151228258	151228259	chr3:151228259:T:C	rs4680254	T	C	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr3	151240113	151240114	chr3:151240114:A:G	rs12639390	A	G	A	Sox2_MA0143.3	-13	0	+	0	0	.
chr3	151289345	151289346	chr3:151289346:A:G	rs115572365	A	G	A	Sox2_MA0143.3	6	1	-	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr3	151296482	151296483	chr3:151296483:G:C	rs58334126	G	C	G	Sox2_MA0143.3	21	0	-	0	0	.
chr3	151346227	151346228	chr3:151346228:T:C	rs6804769	T	C	T	Sox2_MA0143.3	-19	0	+	0	0	.
chr3	151346583	151346584	chr3:151346584:C:T	rs57361678	C	T	C	Sox2_MA0143.3	27	0	+	0	0	.
chr3	151356834	151356835	chr3:151356835:T:G	rs7428575	T	G	T	Sox2_MA0143.3	-2	0	+	0	0	.
chr3	151387638	151387639	chr3:151387639:C:T	chr3:151387639:C:T	C	T	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr3	151432042	151432043	chr3:151432043:A:G	rs76942356	A	G	A	Sox2_MA0143.3	2	1	+	9.613475778572903	3.494828071296623	CCATTGTT
chr3	151528619	151528620	chr3:151528620:C:T	rs6440766	C	T	C	Sox2_MA0143.3	-20	0	-	0	0	.
chr3	151580770	151580771	chr3:151580771:T:G	rs144947120	T	G	T	Sox2_MA0143.3	6	1	+	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr3	151615665	151615666	chr3:151615666:C:T	rs16863517	C	T	T	Sox2_MA0143.3	-16	0	-	0	0	.
chr3	151632406	151632407	chr3:151632407:A:G	rs114480139	A	G	A	Sox2_MA0143.3	9	0	-	0	0	.
chr3	151665013	151665014	chr3:151665014:A:T	rs3988151	A	T	T	Sox2_MA0143.3	-7	0	+	0	0	.
chr3	151800732	151800733	chr3:151800733:G:A	rs62272875	G	A	-	Sox2_MA0143.3	-1	0	+	0	0	.
chr3	151805924	151805925	chr3:151805925:G:A	rs67337703	G	A	G	Sox2_MA0143.3	21	0	-	0	0	.
chr3	151898845	151898846	chr3:151898846:T:C	rs55902070	T	C	T	Sox2_MA0143.3	4	1	+	3.5547341015215945	-3.3540206777936254	CCTTTGTA
chr3	151903323	151903324	chr3:151903324:A:G	rs34884284	A	G	A	Sox2_MA0143.3	23	0	-	0	0	.
chr3	151973720	151973721	chr3:151973721:G:T	rs115037634	G	T	G	Sox2_MA0143.3	-5	0	+	0	0	.
chr3	152040703	152040704	chr3:152040704:T:C	rs1842200	T	C	T	Sox2_MA0143.3	13	0	+	0	0	.
chr3	152201302	152201303	chr3:152201303:T:C	chr3:152201303:T:C	T	C	T	Sox2_MA0143.3	-15	0	+	0	0	.
chr3	152243303	152243304	chr3:152243304:T:C	rs6808030	T	C	T	Sox2_MA0143.3	3	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr3	152269438	152269439	chr3:152269439:C:T	chr3:152269439:C:T	C	T	C	Sox2_MA0143.3	1	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr3	152596658	152596659	chr3:152596659:C:T	rs79344533	C	T	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr3	152651809	152651810	chr3:152651810:T:C	rs1400610	T	C	T	Sox2_MA0143.3	-4	0	-	0	0	.
chr3	152707098	152707099	chr3:152707099:C:T	rs149853441	C	T	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr3	152745872	152745873	chr3:152745873:T:C	rs1461167	T	C	T	Sox2_MA0143.3	13	0	-	0	0	.
chr3	152869688	152869689	chr3:152869689:G:A	rs4680009	G	A	A	Sox2_MA0143.3	-14	0	-	0	0	.
chr3	152892752	152892753	chr3:152892753:C:T	rs13063259	C	T	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr3	152892768	152892769	chr3:152892769:G:A	rs34245652	G	A	G	Sox2_MA0143.3	10	0	+	0	0	.
chr3	152893962	152893963	chr3:152893963:C:G	rs7627648	C	G	G	Sox2_MA0143.3	22	0	-	0	0	.
chr3	153138917	153138918	chr3:153138918:C:A	rs73007744	C	A	C	Sox2_MA0143.3	0	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr3	153144624	153144625	chr3:153144625:T:C	rs61245505	T	C	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr3	153144628	153144629	chr3:153144629:G:A	rs60182682	G	A	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr3	153161048	153161049	chr3:153161049:C:A	rs894801	C	A	C	Sox2_MA0143.3	26	0	+	0	0	.
chr3	153161049	153161050	chr3:153161050:G:A	rs141243444	G	A	G	Sox2_MA0143.3	27	0	+	0	0	.
chr3	153209797	153209798	chr3:153209798:C:T	rs73011425	C	T	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr3	153209798	153209799	chr3:153209799:G:A	rs115575377	G	A	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr3	153445945	153445946	chr3:153445946:G:T	rs10935935	G	T	G	Sox2_MA0143.3	17	0	+	0	0	.
chr3	153621712	153621713	chr3:153621713:G:C	rs11710785	G	C	G	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr3	153637483	153637484	chr3:153637484:A:T	rs2056538	A	T	A	Sox2_MA0143.3	17	0	-	0	0	.
chr3	153641146	153641147	chr3:153641147:C:A	rs143708094	C	A	C	Sox2_MA0143.3	25	0	-	0	0	.
chr3	153761261	153761262	chr3:153761262:G:A	rs114741504	G	A	g	Sox2_MA0143.3	-10	0	-	0	0	.
chr3	153763121	153763122	chr3:153763122:A:T	rs677150	A	T	A	Sox2_MA0143.3	6	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr3	153792352	153792353	chr3:153792353:T:C	rs79047102	T	C	T	Sox2_MA0143.3	-3	0	+	0	0	.
chr3	153838104	153838105	chr3:153838105:T:C	rs77429398	T	C	T	Sox2_MA0143.3	-18	0	+	0	0	.
chr3	153971080	153971081	chr3:153971081:G:A	rs1521303	G	A	G	Sox2_MA0143.3	0	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr3	154024206	154024207	chr3:154024207:C:T	rs11718646	C	T	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr3	154122055	154122056	chr3:154122056:T:G	chr3:154122056:T:G	T	G	T	Sox2_MA0143.3	18	0	+	0	0	.
chr3	154184994	154184995	chr3:154184995:A:G	rs9289938	A	G	G	Sox2_MA0143.3	2	1	+	8.676919043985553	2.5582713367092715	CCATTGTG
chr3	154325253	154325254	chr3:154325254:A:G	rs1055644727	A	G	A	Sox2_MA0143.3	8	0	-	0	0	.
chr3	154325325	154325326	chr3:154325326:C:T	rs148173531	C	T	C	Sox2_MA0143.3	0	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr3	154428049	154428050	chr3:154428050:G:A	rs148942253	G	A	G	Sox2_MA0143.3	8	0	+	0	0	.
chr3	154428067	154428068	chr3:154428068:C:A	rs113469042	C	A	C	Sox2_MA0143.3	26	0	+	0	0	.
chr3	154750904	154750905	chr3:154750905:G:A	rs68111359	G	A	G	Sox2_MA0143.3	-9	0	+	0	0	.
chr3	154969548	154969549	chr3:154969549:C:T	rs940894	C	T	T	Sox2_MA0143.3	-11	0	+	0	0	.
chr3	155112679	155112680	chr3:155112680:G:A	rs10935998	G	A	G	Sox2_MA0143.3	25	0	-	0	0	.
chr3	155227124	155227125	chr3:155227125:A:G	rs73875868	A	G	A	Sox2_MA0143.3	2	1	+	9.019595766176417	2.900948058900136	CCATTGTC
chr3	155271167	155271168	chr3:155271168:T:C	rs114995799	T	C	T	Sox2_MA0143.3	-7	0	-	0	0	.
chr3	155344694	155344695	chr3:155344695:C:T	rs8180003	C	T	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr3	155421323	155421324	chr3:155421324:C:T	rs149075518	C	T	C	Sox2_MA0143.3	27	0	-	0	0	.
chr3	155424663	155424664	chr3:155424664:C:A	rs75554371	C	A	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr3	155486170	155486171	chr3:155486171:T:A	rs73011560	T	A	T	Sox2_MA0143.3	25	0	+	0	0	.
chr3	155550964	155550965	chr3:155550965:T:A	rs13327502	T	A	T	Sox2_MA0143.3	6	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr3	155620541	155620542	chr3:155620542:G:C	rs3908142	G	C	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr3	155637928	155637929	chr3:155637929:T:C	rs6441003	T	C	T	Sox2_MA0143.3	25	0	-	0	0	.
chr3	155743667	155743668	chr3:155743668:C:T	rs75712386	C	T	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr3	155743679	155743680	chr3:155743680:A:C	rs79519087	A	C	A	Sox2_MA0143.3	-2	0	+	0	0	.
chr3	156099927	156099928	chr3:156099928:G:A	rs67884325	G	A	A	Sox2_MA0143.3	16	0	+	0	0	.
chr3	156266147	156266148	chr3:156266148:C:A	rs13081735	C	A	A	Sox2_MA0143.3	-11	0	+	0	0	.
chr3	156291182	156291183	chr3:156291183:A:G	rs947035658	A	G	A	Sox2_MA0143.3	-15	0	-	0	0	.
chr3	156322114	156322115	chr3:156322115:G:A	rs143686660	G	A	G	Sox2_MA0143.3	13	0	-	0	0	.
chr3	156322162	156322163	chr3:156322163:T:C	rs78855503	T	C	T	Sox2_MA0143.3	-7	0	-	0	0	.
chr3	156445343	156445344	chr3:156445344:C:T	rs55896573	C	T	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr3	156658765	156658766	chr3:156658766:A:G	rs1397190	A	G	A	Sox2_MA0143.3	-6	0	+	0	0	.
chr3	156689795	156689796	chr3:156689796:C:T	rs344010	C	T	T	Sox2_MA0143.3	-20	0	+	0	0	.
chr3	156689798	156689799	chr3:156689799:A:C	rs9834930	A	C	A	Sox2_MA0143.3	-17	0	+	0	0	.
chr3	156797632	156797633	chr3:156797633:T:G	rs78416935	T	G	T	Sox2_MA0143.3	27	0	-	0	0	.
chr3	156825722	156825723	chr3:156825723:G:T	rs114535621	G	T	G	Sox2_MA0143.3	8	0	-	0	0	.
chr3	156977819	156977820	chr3:156977820:T:A	rs1384538	T	A	T	Sox2_MA0143.3	-8	0	+	0	0	.
chr3	156988181	156988182	chr3:156988182:C:G	rs1482850	C	G	C	Sox2_MA0143.3	14	0	+	0	0	.
chr3	157076117	157076118	chr3:157076118:C:T	rs73170826	C	T	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr3	157095442	157095443	chr3:157095443:G:T	rs79673103	G	T	G	Sox2_MA0143.3	25	0	+	0	0	.
chr3	157159013	157159014	chr3:157159014:T:G	rs6441116	T	G	T	Sox2_MA0143.3	12	0	+	0	0	.
chr3	157159287	157159288	chr3:157159288:G:A	chr3:157159288:G:A	G	A	G	Sox2_MA0143.3	9	0	-	0	0	.
chr3	157159298	157159299	chr3:157159299:C:G	rs201786446	C	G	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr3	157179175	157179176	chr3:157179176:C:T	rs6777922	C	T	-	Sox2_MA0143.3	23	0	-	0	0	.
chr3	157406422	157406423	chr3:157406423:T:G	rs77865913	T	G	T	Sox2_MA0143.3	2	1	+	9.206767037375712	2.900948058900136	CCTTTGTC
chr3	157437016	157437017	chr3:157437017:G:A	chr3:157437017:G:A	G	A	G	Sox2_MA0143.3	26	0	-	0	0	.
chr3	157437049	157437050	chr3:157437050:T:G	rs34655398	T	G	t	Sox2_MA0143.3	-7	0	-	0	0	.
chr3	157586354	157586355	chr3:157586355:G:A	rs78701399	G	A	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr3	157619630	157619631	chr3:157619631:G:A	rs4680387	G	A	G	Sox2_MA0143.3	9	0	+	0	0	.
chr3	157767986	157767987	chr3:157767987:A:G	rs807200	A	G	A	Sox2_MA0143.3	-7	0	+	0	0	.
chr3	157789366	157789367	chr3:157789367:A:G	rs1979578	A	G	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr3	157789381	157789382	chr3:157789382:C:T	rs74318406	C	T	C	Sox2_MA0143.3	0	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr3	157794773	157794774	chr3:157794774:A:T	rs17672808	A	T	A	Sox2_MA0143.3	-20	0	+	0	0	.
chr3	157921426	157921427	chr3:157921427:C:T	rs115540174	C	T	C	Sox2_MA0143.3	5	1	-	9.019595766176417	2.110840986861197	CCATTGTC
chr3	157964084	157964085	chr3:157964085:T:G	rs35113344	T	G	t	Sox2_MA0143.3	8	0	+	0	0	.
chr3	158101371	158101372	chr3:158101372:G:A	rs1915938	G	A	G	Sox2_MA0143.3	25	0	+	0	0	.
chr3	158132420	158132421	chr3:158132421:A:C	rs13061378	A	C	A	Sox2_MA0143.3	6	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr3	158313161	158313162	chr3:158313162:T:C	rs1730039	T	C	C	Sox2_MA0143.3	20	0	+	0	0	.
chr3	158331015	158331016	chr3:158331016:T:C	rs747048890	T	C	T	Sox2_MA0143.3	-14	0	+	0	0	.
chr3	158482577	158482578	chr3:158482578:A:C	rs60745172	A	C	A	Sox2_MA0143.3	-3	0	+	0	0	.
chr3	158496740	158496741	chr3:158496741:G:T	rs73020715	G	T	G	Sox2_MA0143.3	-5	0	+	0	0	.
chr3	158632188	158632189	chr3:158632189:C:A	rs4680448	C	A	C	Sox2_MA0143.3	5	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr3	158660123	158660124	chr3:158660124:C:T	rs4680454	C	T	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr3	158732734	158732735	chr3:158732735:C:T	rs150975468	C	T	C	Sox2_MA0143.3	-20	0	-	0	0	.
chr3	158742998	158742999	chr3:158742999:T:A	rs73017540	T	A	T	Sox2_MA0143.3	-16	0	-	0	0	.
chr3	158759072	158759073	chr3:158759073:A:G	rs6775607	A	G	A	Sox2_MA0143.3	2	1	+	9.019595766176417	2.900948058900136	CCATTGTC
chr3	158795141	158795142	chr3:158795142:C:T	chr3:158795142:C:T	C	T	C	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr3	158848992	158848993	chr3:158848993:C:A	rs61796815	C	A	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr3	159171623	159171624	chr3:159171624:A:G	rs57511935	A	G	A	Sox2_MA0143.3	-1	0	+	0	0	.
chr3	159362780	159362781	chr3:159362781:C:T	rs733904	C	T	C	Sox2_MA0143.3	15	0	+	0	0	.
chr3	159462272	159462273	chr3:159462273:A:G	rs6441263	A	G	A	Sox2_MA0143.3	2	1	+	9.613475778572903	3.494828071296623	CCATTGTT
chr3	159761382	159761383	chr3:159761383:T:C	rs34685683	T	C	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr3	159767478	159767479	chr3:159767479:G:A	rs13070254	G	A	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr3	159816831	159816832	chr3:159816832:C:T	rs80242993	C	T	C	Sox2_MA0143.3	17	0	+	0	0	.
chr3	159837168	159837169	chr3:159837169:T:G	rs13088856	T	G	G	Sox2_MA0143.3	3	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr3	159914006	159914007	chr3:159914007:G:T	rs7644697	G	T	G	Sox2_MA0143.3	14	0	+	0	0	.
chr3	159927881	159927882	chr3:159927882:A:C	rs6805758	A	C	A	Sox2_MA0143.3	26	0	-	0	0	.
chr3	159936382	159936383	chr3:159936383:T:C	rs9819226	T	C	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr3	160449046	160449047	chr3:160449047:G:A	rs148657075	G	A	G	Sox2_MA0143.3	20	0	-	0	0	.
chr3	160449311	160449312	chr3:160449312:G:A	rs17236480	G	A	G	Sox2_MA0143.3	17	0	-	0	0	.
chr3	160565207	160565208	chr3:160565208:G:C	rs565552038	G	C	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr3	160612661	160612662	chr3:160612662:T:C	rs6769010	T	C	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr3	160756016	160756017	chr3:160756017:A:C	chr3:160756017:A:C	A	C	A	Sox2_MA0143.3	26	0	-	0	0	.
chr3	160757919	160757920	chr3:160757920:A:G	rs115577246	A	G	A	Sox2_MA0143.3	14	0	+	0	0	.
chr3	160793781	160793782	chr3:160793782:A:G	rs140457474	A	G	A	Sox2_MA0143.3	6	1	-	9.613475778572903	2.7047209992576837	CCATTGTT
chr3	160812354	160812355	chr3:160812355:A:G	rs55891037	A	G	A	Sox2_MA0143.3	-7	0	+	0	0	.
chr3	160825807	160825808	chr3:160825808:G:C	rs77765964	G	C	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr3	161057462	161057463	chr3:161057463:A:T	rs1037888	A	T	T	Sox2_MA0143.3	19	0	-	0	0	.
chr3	161060409	161060410	chr3:161060410:G:C	rs12494133	G	C	G	Sox2_MA0143.3	-9	0	+	0	0	.
chr3	161069871	161069872	chr3:161069872:T:C	rs79137634	T	C	T	Sox2_MA0143.3	23	0	+	0	0	.
chr3	161395596	161395597	chr3:161395597:A:G	rs575351521	A	G	A	Sox2_MA0143.3	-19	0	+	0	0	.
chr3	161440854	161440855	chr3:161440855:A:G	rs9841691	A	G	G	Sox2_MA0143.3	8	0	+	0	0	.
chr3	161560359	161560360	chr3:161560360:T:G	rs62279583	T	G	T	Sox2_MA0143.3	21	0	-	0	0	.
chr3	161773362	161773363	chr3:161773363:T:C	rs518024	T	C	C	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr3	161915315	161915316	chr3:161915316:C:T	rs7626487	C	T	T	Sox2_MA0143.3	27	0	-	0	0	.
chr3	162059146	162059147	chr3:162059147:A:G	rs13089467	A	G	g	Sox2_MA0143.3	-2	0	-	0	0	.
chr3	162072749	162072750	chr3:162072750:C:T	rs993595	C	T	C	Sox2_MA0143.3	10	0	+	0	0	.
chr3	162112078	162112079	chr3:162112079:G:A	rs115608802	G	A	G	Sox2_MA0143.3	20	0	-	0	0	.
chr3	162123229	162123230	chr3:162123230:A:T	rs2175263	A	T	.	Sox2_MA0143.3	-11	0	-	0	0	.
chr3	162176103	162176104	chr3:162176104:G:A	rs113906695	G	A	G	Sox2_MA0143.3	16	0	+	0	0	.
chr3	162353802	162353803	chr3:162353803:A:C	rs6763928	A	C	a	Sox2_MA0143.3	14	0	+	0	0	.
chr3	162391594	162391595	chr3:162391595:C:T	rs2897223	C	T	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr3	162391611	162391612	chr3:162391612:A:G	rs1176046568	A	G	A	Sox2_MA0143.3	15	0	+	0	0	.
chr3	162525962	162525963	chr3:162525963:C:T	rs1478146	C	T	C	Sox2_MA0143.3	1	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr3	162731211	162731212	chr3:162731212:A:G	rs9835079	A	G	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr3	162986434	162986435	chr3:162986435:T:C	rs9852069	T	C	T	Sox2_MA0143.3	25	0	-	0	0	.
chr3	163107784	163107785	chr3:163107785:T:C	rs28760994	T	C	C	Sox2_MA0143.3	17	0	+	0	0	.
chr3	163303666	163303667	chr3:163303667:G:T	rs843066	G	T	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr3	163474960	163474961	chr3:163474961:A:G	rs17477274	A	G	A	Sox2_MA0143.3	2	1	+	9.019595766176417	2.900948058900136	CCATTGTC
chr3	163523823	163523824	chr3:163523824:T:C	rs62294685	T	C	T	Sox2_MA0143.3	3	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr3	164113458	164113459	chr3:164113459:G:A	rs1375846	G	A	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr3	164209651	164209652	chr3:164209652:T:G	rs491306	T	G	G	Sox2_MA0143.3	7	1	-	3.5547341015215945	9.206767037375712	CCTTTGTA
chr3	164347147	164347148	chr3:164347148:G:A	rs74682881	G	A	g	Sox2_MA0143.3	-6	0	+	0	0	.
chr3	164641369	164641370	chr3:164641370:T:C	rs62282562	T	C	T	Sox2_MA0143.3	25	0	+	0	0	.
chr3	164657179	164657180	chr3:164657180:A:G	rs146065217	A	G	A	Sox2_MA0143.3	-16	0	+	0	0	.
chr3	165389346	165389347	chr3:165389347:A:G	rs144137111	A	G	.	Sox2_MA0143.3	19	0	+	0	0	.
chr3	165486554	165486555	chr3:165486555:A:G	rs6781490	A	G	G	Sox2_MA0143.3	27	0	+	0	0	.
chr3	165665075	165665076	chr3:165665076:G:A	rs3106436	G	A	A	Sox2_MA0143.3	-7	0	-	0	0	.
chr3	165965952	165965953	chr3:165965953:G:A	rs9829437	G	A	A	Sox2_MA0143.3	13	0	-	0	0	.
chr3	166087514	166087515	chr3:166087515:T:G	rs73171032	T	G	G	Sox2_MA0143.3	17	0	+	0	0	.
chr3	166257985	166257986	chr3:166257986:T:C	rs62292796	T	C	T	Sox2_MA0143.3	-9	0	-	0	0	.
chr3	166263185	166263186	chr3:166263186:G:C	rs9812602	G	C	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr3	166976323	166976324	chr3:166976324:T:C	rs7620190	T	C	T	Sox2_MA0143.3	3	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr3	167011128	167011129	chr3:167011129:C:G	rs147686985	C	G	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr3	167018545	167018546	chr3:167018546:C:T	rs28415321	C	T	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr3	167084711	167084712	chr3:167084712:G:A	rs9816219	G	A	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr3	167574990	167574991	chr3:167574991:C:T	rs75728687	C	T	T	Sox2_MA0143.3	15	0	-	0	0	.
chr3	167812390	167812391	chr3:167812391:G:C	rs62279608	G	C	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr3	167874919	167874920	chr3:167874920:G:A	rs114067849	G	A	G	Sox2_MA0143.3	11	0	-	0	0	.
chr3	167887264	167887265	chr3:167887265:T:C	rs77296876	T	C	T	Sox2_MA0143.3	19	0	+	0	0	.
chr3	167938762	167938763	chr3:167938763:A:G	rs62273267	A	G	a	Sox2_MA0143.3	8	0	-	0	0	.
chr3	167978163	167978164	chr3:167978164:A:T	rs111789319	A	T	A	Sox2_MA0143.3	10	0	-	0	0	.
chr3	168095732	168095733	chr3:168095733:G:T	rs762748170	G	T	.	Sox2_MA0143.3	17	0	-	0	0	.
chr3	168220823	168220824	chr3:168220824:C:T	rs9811229	C	T	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr3	168223263	168223264	chr3:168223264:G:A	rs150419033	G	A	G	Sox2_MA0143.3	23	0	-	0	0	.
chr3	168342265	168342266	chr3:168342266:T:C	rs116538389	T	C	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr3	168699075	168699076	chr3:168699076:G:A	rs143290608	G	A	g	Sox2_MA0143.3	17	0	-	0	0	.
chr3	168824500	168824501	chr3:168824501:C:T	rs16852674	C	T	C	Sox2_MA0143.3	1	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr3	168927246	168927247	chr3:168927247:T:G	rs1498444	T	G	T	Sox2_MA0143.3	3	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr3	168930250	168930251	chr3:168930251:T:C	rs2201862	T	C	c	Sox2_MA0143.3	22	0	+	0	0	.
chr3	169148921	169148922	chr3:169148922:A:G	rs375425403	A	G	A	Sox2_MA0143.3	24	0	+	0	0	.
chr3	169148946	169148947	chr3:169148947:A:T	rs61416664	A	T	A	Sox2_MA0143.3	-2	0	+	0	0	.
chr3	169242108	169242109	chr3:169242109:T:G	rs80007910	T	G	T	Sox2_MA0143.3	22	0	+	0	0	.
chr3	169312190	169312191	chr3:169312191:A:G	rs12634933	A	G	A	Sox2_MA0143.3	-18	0	-	0	0	.
chr3	169324563	169324564	chr3:169324564:C:A	rs9849779	C	A	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr3	169363803	169363804	chr3:169363804:T:A	rs62293353	T	A	T	Sox2_MA0143.3	21	0	-	0	0	.
chr3	169363824	169363825	chr3:169363825:G:A	rs74605550	G	A	G	Sox2_MA0143.3	0	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr3	169404361	169404362	chr3:169404362:T:C	rs17550965	T	C	T	Sox2_MA0143.3	-4	0	-	0	0	.
chr3	169453829	169453830	chr3:169453830:A:T	rs4955659	A	T	A	Sox2_MA0143.3	6	1	-	8.676919043985553	1.7681642646703326	CCATTGTG
chr3	169605169	169605170	chr3:169605170:T:C	rs6763377	T	C	T	Sox2_MA0143.3	-6	0	-	0	0	.
chr3	169613370	169613371	chr3:169613371:C:T	rs73174384	C	T	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr3	169634669	169634670	chr3:169634670:T:C	rs7652404	T	C	T	Sox2_MA0143.3	-17	0	-	0	0	.
chr3	169836340	169836341	chr3:169836341:G:A	rs2421830	G	A	G	Sox2_MA0143.3	13	0	-	0	0	.
chr3	170045159	170045160	chr3:170045160:T:C	rs76246255	T	C	T	Sox2_MA0143.3	-19	0	+	0	0	.
chr3	170045165	170045166	chr3:170045166:G:A	rs73028683	G	A	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr3	170060470	170060471	chr3:170060471:C:T	rs7621777	C	T	T	Sox2_MA0143.3	-18	0	-	0	0	.
chr3	170062923	170062924	chr3:170062924:C:T	rs2270441	C	T	C	Sox2_MA0143.3	17	0	+	0	0	.
chr3	170075523	170075524	chr3:170075524:G:A	rs56761528	G	A	G	Sox2_MA0143.3	12	0	+	0	0	.
chr3	170079917	170079918	chr3:170079918:T:C	rs75307193	T	C	G	Sox2_MA0143.3	20	0	-	0	0	.
chr3	170197164	170197165	chr3:170197165:T:G	rs1798239	T	G	G	Sox2_MA0143.3	-3	0	-	0	0	.
chr3	170222180	170222181	chr3:170222181:G:T	chr3:170222181:G:T	G	T	G	Sox2_MA0143.3	5	1	+	9.019595766176417	2.110840986861197	CCATTGTC
chr3	170278357	170278358	chr3:170278358:G:A	rs1798237	G	A	G	Sox2_MA0143.3	9	0	-	0	0	.
chr3	170421121	170421122	chr3:170421122:T:C	rs77219516	T	C	T	Sox2_MA0143.3	-4	0	-	0	0	.
chr3	170425997	170425998	chr3:170425998:G:A	rs544828925	G	A	G	Sox2_MA0143.3	5	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr3	170445187	170445188	chr3:170445188:T:C	rs138248266	T	C	T	Sox2_MA0143.3	3	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr3	170524190	170524191	chr3:170524191:A:G	rs35989334	A	G	A	Sox2_MA0143.3	3	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr3	170739736	170739737	chr3:170739737:C:G	rs566372	C	G	G	Sox2_MA0143.3	22	0	-	0	0	.
chr3	170809749	170809750	chr3:170809750:A:C	rs114177190	A	C	A	Sox2_MA0143.3	-3	0	-	0	0	.
chr3	170865098	170865099	chr3:170865099:C:T	rs13063927	C	T	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr3	171176618	171176619	chr3:171176619:A:G	rs73171511	A	G	A	Sox2_MA0143.3	4	1	-	3.5547341015215945	-3.3540206777936254	CCTTTGTA
chr3	171256641	171256642	chr3:171256642:G:A	rs77124596	G	A	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr3	171283882	171283883	chr3:171283883:G:A	rs61794366	G	A	G	Sox2_MA0143.3	20	0	-	0	0	.
chr3	171328870	171328871	chr3:171328871:A:G	chr3:171328871:A:G	A	G	A	Sox2_MA0143.3	20	0	-	0	0	.
chr3	171388795	171388796	chr3:171388796:A:C	rs10936680	A	C	C	Sox2_MA0143.3	12	0	+	0	0	.
chr3	171400001	171400002	chr3:171400002:G:A	rs191167786	G	A	G	Sox2_MA0143.3	-3	0	+	0	0	.
chr3	171417360	171417361	chr3:171417361:T:C	rs7612582	T	C	T	Sox2_MA0143.3	-2	0	-	0	0	.
chr3	171459189	171459190	chr3:171459190:A:G	rs13059009	A	G	A	Sox2_MA0143.3	3	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr3	171736773	171736774	chr3:171736774:T:A	rs76435452	T	A	T	Sox2_MA0143.3	21	0	-	0	0	.
chr3	171824360	171824361	chr3:171824361:C:T	rs3850185	C	T	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr3	171831880	171831881	chr3:171831881:C:T	rs9850602	C	T	T	Sox2_MA0143.3	-14	0	+	0	0	.
chr3	171842036	171842037	chr3:171842037:C:A	rs3850188	C	A	A	Sox2_MA0143.3	-13	0	+	0	0	.
chr3	171863098	171863099	chr3:171863099:G:A	rs114831348	G	A	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr3	171865320	171865321	chr3:171865321:C:A	rs11927027	C	A	A	Sox2_MA0143.3	-1	0	-	0	0	.
chr3	171878815	171878816	chr3:171878816:C:T	rs184427882	C	T	C	Sox2_MA0143.3	14	0	-	0	0	.
chr3	171878818	171878819	chr3:171878819:C:A	rs11914354	C	A	C	Sox2_MA0143.3	11	0	-	0	0	.
chr3	171881663	171881664	chr3:171881664:G:A	rs9825237	G	A	G	Sox2_MA0143.3	14	0	-	0	0	.
chr3	171972964	171972965	chr3:171972965:T:C	rs117352496	T	C	T	Sox2_MA0143.3	11	0	+	0	0	.
chr3	172038136	172038137	chr3:172038137:C:T	rs12493157	C	T	C	Sox2_MA0143.3	5	1	-	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr3	172228380	172228381	chr3:172228381:G:A	rs4525896	G	A	G	Sox2_MA0143.3	10	0	+	0	0	.
chr3	172243694	172243695	chr3:172243695:G:A	rs9879470	G	A	A	Sox2_MA0143.3	-9	0	+	0	0	.
chr3	172247838	172247839	chr3:172247839:A:G	rs7625921	A	G	A	Sox2_MA0143.3	-7	0	+	0	0	.
chr3	172442610	172442611	chr3:172442611:A:G	rs13085429	A	G	A	Sox2_MA0143.3	-6	0	-	0	0	.
chr3	172459973	172459974	chr3:172459974:C:T	rs13317803	C	T	T	Sox2_MA0143.3	7	1	-	8.864090315184848	3.5547341015215945	CCTTTGTG
chr3	172520413	172520414	chr3:172520414:G:A	rs6777176	G	A	G	Sox2_MA0143.3	-2	0	+	0	0	.
chr3	172527612	172527613	chr3:172527613:A:G	rs17601515	A	G	A	Sox2_MA0143.3	20	0	-	0	0	.
chr3	172544065	172544066	chr3:172544066:G:C	rs6774291	G	C	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr3	172559188	172559189	chr3:172559189:T:C	rs231988	T	C	C	Sox2_MA0143.3	21	0	-	0	0	.
chr3	172594656	172594657	chr3:172594657:C:T	rs234048	C	T	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr3	172644916	172644917	chr3:172644917:G:A	rs98106	G	A	G	Sox2_MA0143.3	21	0	-	0	0	.
chr3	172673237	172673238	chr3:172673238:G:A	rs13434251	G	A	A	Sox2_MA0143.3	11	0	+	0	0	.
chr3	172885891	172885892	chr3:172885892:C:T	rs1156615	C	T	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr3	172892196	172892197	chr3:172892197:G:C	rs2861042	G	C	C	Sox2_MA0143.3	19	0	+	0	0	.
chr3	173036103	173036104	chr3:173036104:T:G	rs791831	T	G	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr3	173301804	173301805	chr3:173301805:G:A	rs1520604	G	A	A	Sox2_MA0143.3	-10	0	-	0	0	.
chr3	173587307	173587308	chr3:173587308:G:A	rs78476583	G	A	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr3	173709290	173709291	chr3:173709291:A:T	rs59812020	A	T	A	Sox2_MA0143.3	25	0	-	0	0	.
chr3	173745108	173745109	chr3:173745109:C:T	rs28373761	C	T	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr3	173824497	173824498	chr3:173824498:C:T	rs73880591	C	T	T	Sox2_MA0143.3	15	0	-	0	0	.
chr3	174169972	174169973	chr3:174169973:A:G	rs61139285	A	G	A	Sox2_MA0143.3	15	0	-	0	0	.
chr3	174183178	174183179	chr3:174183179:C:A	rs16857562	C	A	A	Sox2_MA0143.3	15	0	+	0	0	.
chr3	174202374	174202375	chr3:174202375:C:T	rs9880810	C	T	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr3	174304264	174304265	chr3:174304265:A:G	rs11714567	A	G	A	Sox2_MA0143.3	27	0	+	0	0	.
chr3	174775697	174775698	chr3:174775698:C:T	rs541467	C	T	T	Sox2_MA0143.3	-8	0	-	0	0	.
chr3	174775705	174775706	chr3:174775706:A:G	rs148167977	A	G	A	Sox2_MA0143.3	-16	0	-	0	0	.
chr3	174885097	174885098	chr3:174885098:T:G	rs115344427	T	G	T	Sox2_MA0143.3	-16	0	+	0	0	.
chr3	174949655	174949656	chr3:174949656:A:G	rs6801807	A	G	G	Sox2_MA0143.3	15	0	-	0	0	.
chr3	175047119	175047120	chr3:175047120:G:A	rs9851386	G	A	A	Sox2_MA0143.3	-19	0	-	0	0	.
chr3	175186517	175186518	chr3:175186518:A:C	chr3:175186518:A:C	A	C	A	Sox2_MA0143.3	-12	0	+	0	0	.
chr3	175186519	175186520	chr3:175186520:T:G	chr3:175186520:T:G	T	G	T	Sox2_MA0143.3	-10	0	+	0	0	.
chr3	175340754	175340755	chr3:175340755:T:C	rs2080787	T	C	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr3	175386751	175386752	chr3:175386752:G:A	rs76840604	G	A	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr3	175392665	175392666	chr3:175392666:G:C	rs753291	G	C	C	Sox2_MA0143.3	21	0	+	0	0	.
chr3	175411831	175411832	chr3:175411832:A:T	rs9879366	A	T	A	Sox2_MA0143.3	-2	0	-	0	0	.
chr3	175512843	175512844	chr3:175512844:T:C	rs76047223	T	C	T	Sox2_MA0143.3	-4	0	+	0	0	.
chr3	175512856	175512857	chr3:175512857:C:T	rs73884439	C	T	T	Sox2_MA0143.3	9	0	+	0	0	.
chr3	175606100	175606101	chr3:175606101:G:A	rs571384087	G	A	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr3	175747250	175747251	chr3:175747251:C:T	rs62286114	C	T	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr3	175825521	175825522	chr3:175825522:A:G	rs4894736	A	G	G	Sox2_MA0143.3	19	0	-	0	0	.
chr3	176079378	176079379	chr3:176079379:T:C	rs4392424	T	C	T	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr3	176079397	176079398	chr3:176079398:C:T	rs9881454	C	T	C	Sox2_MA0143.3	22	0	+	0	0	.
chr3	176569567	176569568	chr3:176569568:T:C	rs6769450	T	C	T	Sox2_MA0143.3	-8	0	-	0	0	.
chr3	176595472	176595473	chr3:176595473:T:C	rs9848490	T	C	T	Sox2_MA0143.3	-18	0	-	0	0	.
chr3	176650539	176650540	chr3:176650540:T:G	rs112323198	T	G	T	Sox2_MA0143.3	-10	0	-	0	0	.
chr3	176855945	176855946	chr3:176855946:T:C	rs2902280	T	C	T	Sox2_MA0143.3	6	1	+	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr3	176974275	176974276	chr3:176974276:A:G	rs62298888	A	G	A	Sox2_MA0143.3	2	1	+	8.676919043985553	2.5582713367092715	CCATTGTG
chr3	177014195	177014196	chr3:177014196:C:A	rs76567320	C	A	C	Sox2_MA0143.3	12	0	+	0	0	.
chr3	177051098	177051099	chr3:177051099:G:A	rs28649009	G	A	A	Sox2_MA0143.3	-15	0	-	0	0	.
chr3	177191043	177191044	chr3:177191044:G:A	rs9829086	G	A	G	Sox2_MA0143.3	1	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr3	177191792	177191793	chr3:177191793:G:C	rs4857824	G	C	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr3	177191793	177191794	chr3:177191794:A:G	rs6804369	A	G	A	Sox2_MA0143.3	-9	0	+	0	0	.
chr3	177192788	177192789	chr3:177192789:C:T	rs12490455	C	T	C	Sox2_MA0143.3	16	0	+	0	0	.
chr3	177195404	177195405	chr3:177195405:G:A	rs192738762	G	A	G	Sox2_MA0143.3	9	0	-	0	0	.
chr3	177250083	177250084	chr3:177250084:T:C	rs58274234	T	C	T	Sox2_MA0143.3	-15	0	-	0	0	.
chr3	177271246	177271247	chr3:177271247:G:T	rs62298167	G	T	T	Sox2_MA0143.3	7	1	-	9.206767037375712	3.5547341015215945	CCTTTGTC
chr3	177321531	177321532	chr3:177321532:G:A	rs7622715	G	A	G	Sox2_MA0143.3	12	0	-	0	0	.
chr3	177359781	177359782	chr3:177359782:C:T	chr3:177359782:C:T	C	T	C	Sox2_MA0143.3	14	0	+	0	0	.
chr3	177426878	177426879	chr3:177426879:C:T	rs73173149	C	T	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr3	177460144	177460145	chr3:177460145:A:G	rs7610534	A	G	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr3	177473147	177473148	chr3:177473148:C:T	rs17555546	C	T	c	Sox2_MA0143.3	-16	0	+	0	0	.
chr3	177578659	177578660	chr3:177578660:T:C	rs13084960	T	C	T	Sox2_MA0143.3	2	1	+	9.206767037375712	2.900948058900136	CCTTTGTC
chr3	177624828	177624829	chr3:177624829:A:G	rs1875101	A	G	A	Sox2_MA0143.3	-8	0	+	0	0	.
chr3	177692752	177692753	chr3:177692753:T:C	rs35652846	T	C	T	Sox2_MA0143.3	-4	0	-	0	0	.
chr3	177692762	177692763	chr3:177692763:G:T	rs34638059	G	T	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr3	177918165	177918166	chr3:177918166:C:A	rs1582399	C	A	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr3	178146658	178146659	chr3:178146659:G:A	rs10049275	G	A	G	Sox2_MA0143.3	25	0	+	0	0	.
chr3	178181728	178181729	chr3:178181729:A:G	rs4557178	A	G	G	Sox2_MA0143.3	24	0	-	0	0	.
chr3	178319757	178319758	chr3:178319758:G:A	rs1837787	G	A	G	Sox2_MA0143.3	15	0	+	0	0	.
chr3	178389411	178389412	chr3:178389412:C:G	rs116255840	C	G	C	Sox2_MA0143.3	18	0	+	0	0	.
chr3	178435825	178435826	chr3:178435826:C:A	rs147956842	C	A	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr3	178454762	178454763	chr3:178454763:C:T	rs9865428	C	T	C	Sox2_MA0143.3	13	0	+	0	0	.
chr3	178488021	178488022	chr3:178488022:A:C	rs10936968	A	C	A	Sox2_MA0143.3	10	0	+	0	0	.
chr3	178646325	178646326	chr3:178646326:A:G	rs1477782	A	G	G	Sox2_MA0143.3	9	0	-	0	0	.
chr3	178646491	178646492	chr3:178646492:G:A	rs139230563	G	A	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr3	178706395	178706396	chr3:178706396:G:C	rs74738385	G	C	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr3	178754916	178754917	chr3:178754917:G:C	rs6797721	G	C	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr3	178823392	178823393	chr3:178823393:A:G	rs6765682	A	G	G	Sox2_MA0143.3	26	0	-	0	0	.
chr3	178823403	178823404	chr3:178823404:T:C	rs9833798	T	C	t	Sox2_MA0143.3	15	0	-	0	0	.
chr3	178849767	178849768	chr3:178849768:C:T	rs34801218	C	T	T	Sox2_MA0143.3	10	0	-	0	0	.
chr3	178908829	178908830	chr3:178908830:T:C	rs6789658	T	C	T	Sox2_MA0143.3	25	0	+	0	0	.
chr3	179064129	179064130	chr3:179064130:C:T	rs57817487	C	T	C	Sox2_MA0143.3	14	0	-	0	0	.
chr3	179194872	179194873	chr3:179194873:G:A	rs7614305	G	A	A	Sox2_MA0143.3	16	0	+	0	0	.
chr3	179316348	179316349	chr3:179316349:A:G	rs74488646	A	G	A	Sox2_MA0143.3	-8	0	-	0	0	.
chr3	179473376	179473377	chr3:179473377:C:T	rs7620057	C	T	C	Sox2_MA0143.3	16	0	+	0	0	.
chr3	179730096	179730097	chr3:179730097:G:T	rs74668648	G	T	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr3	179804523	179804524	chr3:179804524:A:T	rs1442496	A	T	T	Sox2_MA0143.3	-11	0	-	0	0	.
chr3	179883073	179883074	chr3:179883074:A:G	rs567449038	A	G	A	Sox2_MA0143.3	20	0	-	0	0	.
chr3	180012522	180012523	chr3:180012523:T:C	rs80055134	T	C	T	Sox2_MA0143.3	13	0	+	0	0	.
chr3	180034101	180034102	chr3:180034102:T:C	rs939824	T	C	T	Sox2_MA0143.3	-20	0	-	0	0	.
chr3	180805123	180805124	chr3:180805124:A:G	rs75978423	A	G	A	Sox2_MA0143.3	26	0	+	0	0	.
chr3	180821603	180821604	chr3:180821604:A:G	rs10937048	A	G	A	Sox2_MA0143.3	9	0	+	0	0	.
chr3	180854638	180854639	chr3:180854639:G:A	rs146994232	G	A	G	Sox2_MA0143.3	25	0	+	0	0	.
chr3	180889404	180889405	chr3:180889405:C:T	rs55865077	C	T	C	Sox2_MA0143.3	19	0	-	0	0	.
chr3	180912402	180912403	chr3:180912403:A:G	rs34455584	A	G	G	Sox2_MA0143.3	24	0	-	0	0	.
chr3	180912417	180912418	chr3:180912418:T:G	chr3:180912418:T:G	T	G	T	Sox2_MA0143.3	9	0	-	0	0	.
chr3	181710817	181710818	chr3:181710818:A:G	rs7626501	A	G	A	Sox2_MA0143.3	-13	0	-	0	0	.
chr3	181711709	181711710	chr3:181711710:G:A	chr3:181711710:G:A	G	A	G	Sox2_MA0143.3	1	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr3	181793102	181793103	chr3:181793103:G:A	rs56405504	G	A	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr3	181900293	181900294	chr3:181900294:T:C	rs55804460	T	C	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr3	181987949	181987950	chr3:181987950:C:T	rs4854927	C	T	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr3	182238713	182238714	chr3:182238714:A:T	rs73188077	A	T	A	Sox2_MA0143.3	-8	0	+	0	0	.
chr3	182596240	182596241	chr3:182596241:C:T	rs2879560	C	T	T	Sox2_MA0143.3	-17	0	-	0	0	.
chr3	182609240	182609241	chr3:182609241:G:T	rs62292999	G	T	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr3	182643221	182643222	chr3:182643222:C:T	rs79756577	C	T	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr3	182827522	182827523	chr3:182827523:A:G	rs6780927	A	G	A	Sox2_MA0143.3	2	1	+	8.676919043985553	2.5582713367092715	CCATTGTG
chr3	182945727	182945728	chr3:182945728:G:A	rs1509229	G	A	A	Sox2_MA0143.3	-2	0	-	0	0	.
chr3	183074009	183074010	chr3:183074010:C:T	rs554039211	C	T	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr3	183103486	183103487	chr3:183103487:G:A	rs11711441	G	A	g	Sox2_MA0143.3	17	0	-	0	0	.
chr3	183188019	183188020	chr3:183188020:A:G	rs472795	A	G	G	Sox2_MA0143.3	3	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr3	183377871	183377872	chr3:183377872:C:T	rs73884700	C	T	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr3	183476937	183476938	chr3:183476938:A:G	rs2971460	A	G	A	Sox2_MA0143.3	-18	0	+	0	0	.
chr3	183485500	183485501	chr3:183485501:A:C	rs11923573	A	C	A	Sox2_MA0143.3	-12	0	+	0	0	.
chr3	183487198	183487199	chr3:183487199:C:G	rs906720	C	G	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr3	183487208	183487209	chr3:183487209:A:G	rs906721	A	G	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr3	183548465	183548466	chr3:183548466:A:G	rs73884522	A	G	A	Sox2_MA0143.3	24	0	+	0	0	.
chr3	183576610	183576611	chr3:183576611:C:A	rs9870374	C	A	C	Sox2_MA0143.3	-12	0	-	0	0	.
chr3	183635611	183635612	chr3:183635612:A:G	chr3:183635612:A:G	A	G	A	Sox2_MA0143.3	-6	0	+	0	0	.
chr3	183635643	183635644	chr3:183635644:T:C	rs185764726	T	C	T	Sox2_MA0143.3	26	0	+	0	0	.
chr3	183653558	183653559	chr3:183653559:T:C	rs11917141	T	C	T	Sox2_MA0143.3	-14	0	-	0	0	.
chr3	183827493	183827494	chr3:183827494:A:G	rs7349550	A	G	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr3	183832748	183832749	chr3:183832749:T:C	rs262999	T	C	C	Sox2_MA0143.3	7	1	+	9.613475778572903	9.019595766176417	CCATTGTT
chr3	184021843	184021844	chr3:184021844:G:C	rs75375092	G	C	g	Sox2_MA0143.3	-11	0	+	0	0	.
chr3	184076134	184076135	chr3:184076135:C:T	rs60000288	C	T	.	Sox2_MA0143.3	14	0	+	0	0	.
chr3	184206199	184206200	chr3:184206200:T:A	rs905766445	T	A	T	Sox2_MA0143.3	19	0	-	0	0	.
chr3	184300052	184300053	chr3:184300053:G:T	rs144161168	G	T	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr3	184360208	184360209	chr3:184360209:T:C	rs73189632	T	C	c	Sox2_MA0143.3	24	0	-	0	0	.
chr3	184454749	184454750	chr3:184454750:G:T	rs12487997	G	T	G	Sox2_MA0143.3	-2	0	+	0	0	.
chr3	184466708	184466709	chr3:184466709:G:A	chr3:184466709:G:A	G	A	G	Sox2_MA0143.3	11	0	+	0	0	.
chr3	184490498	184490499	chr3:184490499:G:C	rs4912564	G	C	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr3	184506740	184506741	chr3:184506741:A:G	rs73179208	A	G	A	Sox2_MA0143.3	-11	0	+	0	0	.
chr3	184506776	184506777	chr3:184506777:T:G	rs7612178	T	G	G	Sox2_MA0143.3	25	0	+	0	0	.
chr3	184525247	184525248	chr3:184525248:C:G	rs62287379	C	G	C	Sox2_MA0143.3	11	0	-	0	0	.
chr3	184533614	184533615	chr3:184533615:T:G	rs9862520	T	G	T	Sox2_MA0143.3	4	1	+	9.800647049772198	2.8918922704569785	CCTTTGTT
chr3	184541736	184541737	chr3:184541737:T:C	rs142299200	T	C	T	Sox2_MA0143.3	13	0	-	0	0	.
chr3	184550405	184550406	chr3:184550406:G:A	rs10804894	G	A	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr3	184562921	184562922	chr3:184562922:G:C	rs12490206	G	C	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr3	184582777	184582778	chr3:184582778:G:A	rs115881530	G	A	G	Sox2_MA0143.3	8	0	-	0	0	.
chr3	184619555	184619556	chr3:184619556:C:T	rs143004667	C	T	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr3	184652334	184652335	chr3:184652335:T:C	rs4075868	T	C	T	Sox2_MA0143.3	3	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr3	184659277	184659278	chr3:184659278:A:G	rs55703421	A	G	A	Sox2_MA0143.3	9	0	-	0	0	.
chr3	184768508	184768509	chr3:184768509:T:C	rs17818937	T	C	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr3	184775189	184775190	chr3:184775190:T:C	rs4686725	T	C	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr3	184776300	184776301	chr3:184776301:C:T	rs180737915	C	T	C	Sox2_MA0143.3	12	0	+	0	0	.
chr3	184776304	184776305	chr3:184776305:G:C	rs749124	G	C	C	Sox2_MA0143.3	16	0	+	0	0	.
chr3	184815742	184815743	chr3:184815743:G:A	rs6443997	G	A	A	Sox2_MA0143.3	-20	0	+	0	0	.
chr3	185063328	185063329	chr3:185063329:T:C	rs60574599	T	C	T	Sox2_MA0143.3	11	0	-	0	0	.
chr3	185063334	185063335	chr3:185063335:C:A	rs57214613	C	A	C	Sox2_MA0143.3	5	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr3	185176199	185176200	chr3:185176200:G:A	rs888396	G	A	G	Sox2_MA0143.3	23	0	-	0	0	.
chr3	185251483	185251484	chr3:185251484:G:C	chr3:185251484:G:C	G	C	G	Sox2_MA0143.3	19	0	+	0	0	.
chr3	185276506	185276507	chr3:185276507:C:G	rs7433942	C	G	G	Sox2_MA0143.3	-3	0	+	0	0	.
chr3	185317977	185317978	chr3:185317978:G:A	rs1426078432	G	A	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr3	185649625	185649626	chr3:185649626:T:C	rs116832755	T	C	C	Sox2_MA0143.3	2	1	-	9.019595766176417	2.900948058900136	CCATTGTC
chr3	185839240	185839241	chr3:185839241:G:C	rs7611752	G	C	C	Sox2_MA0143.3	9	0	+	0	0	.
chr3	185937665	185937666	chr3:185937666:A:G	rs1862904	A	G	G	Sox2_MA0143.3	2	1	-	8.864090315184848	2.5582713367092715	CCTTTGTG
chr3	185937683	185937684	chr3:185937684:T:C	rs144200211	T	C	T	Sox2_MA0143.3	-16	0	-	0	0	.
chr3	185938371	185938372	chr3:185938372:T:C	rs895252691	T	C	T	Sox2_MA0143.3	-15	0	+	0	0	.
chr3	185987504	185987505	chr3:185987505:A:C	rs35981627	A	C	A	Sox2_MA0143.3	-18	0	-	0	0	.
chr3	186264923	186264924	chr3:186264924:A:G	rs3774062	A	G	A	Sox2_MA0143.3	2	1	+	9.019595766176417	2.900948058900136	CCATTGTC
chr3	186383058	186383059	chr3:186383059:G:A	rs6776796	G	A	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr3	186415137	186415138	chr3:186415138:A:G	rs147394395	A	G	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr3	186477925	186477926	chr3:186477926:C:T	rs6776339	C	T	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr3	186502568	186502569	chr3:186502569:G:C	rs7648822	G	C	C	Sox2_MA0143.3	13	0	-	0	0	.
chr3	186505434	186505435	chr3:186505435:T:C	rs3941831	T	C	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr3	186519660	186519661	chr3:186519661:A:G	rs746953	A	G	A	Sox2_MA0143.3	12	0	+	0	0	.
chr3	186532862	186532863	chr3:186532863:G:T	rs183593915	G	T	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr3	186569122	186569123	chr3:186569123:T:C	rs57990062	T	C	T	Sox2_MA0143.3	-14	0	-	0	0	.
chr3	186569128	186569129	chr3:186569129:C:T	rs60496590	C	T	T	Sox2_MA0143.3	-20	0	-	0	0	.
chr3	186604192	186604193	chr3:186604193:G:T	rs4686790	G	T	T	Sox2_MA0143.3	-3	0	-	0	0	.
chr3	186613179	186613180	chr3:186613180:C:G	rs4831	C	G	C	Sox2_MA0143.3	18	0	+	0	0	.
chr3	186669453	186669454	chr3:186669454:T:C	rs78904050	T	C	T	Sox2_MA0143.3	-8	0	-	0	0	.
chr3	186852401	186852402	chr3:186852402:T:G	rs2036373	T	G	T	Sox2_MA0143.3	-15	0	-	0	0	.
chr3	186857602	186857603	chr3:186857603:G:C	rs1063539	G	C	G	Sox2_MA0143.3	26	0	+	0	0	.
chr3	186860684	186860685	chr3:186860685:C:T	rs7639352	C	T	C	Sox2_MA0143.3	0	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr3	186871543	186871544	chr3:186871544:G:T	rs144825450	G	T	G	Sox2_MA0143.3	5	1	+	9.206767037375712	2.298012258060492	CCTTTGTC
chr3	186880564	186880565	chr3:186880565:C:T	rs79680763	C	T	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr3	186930729	186930730	chr3:186930730:C:T	rs991956614	C	T	C	Sox2_MA0143.3	14	0	-	0	0	.
chr3	186931313	186931314	chr3:186931314:G:A	rs1981767	G	A	G	Sox2_MA0143.3	-3	0	+	0	0	.
chr3	186946939	186946940	chr3:186946940:G:A	rs16861317	G	A	G	Sox2_MA0143.3	15	0	-	0	0	.
chr3	186964706	186964707	chr3:186964707:G:A	rs6807433	G	A	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr3	186964717	186964718	chr3:186964718:C:T	rs6807292	C	T	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr3	186991015	186991016	chr3:186991016:A:G	rs759602	A	G	G	Sox2_MA0143.3	-2	0	+	0	0	.
chr3	187000174	187000175	chr3:187000175:A:G	rs16861424	A	G	A	Sox2_MA0143.3	13	0	-	0	0	.
chr3	187001009	187001010	chr3:187001010:T:C	rs11711828	T	C	C	Sox2_MA0143.3	4	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr3	187006764	187006765	chr3:187006765:A:G	rs6791737	A	G	A	Sox2_MA0143.3	25	0	+	0	0	.
chr3	187023589	187023590	chr3:187023590:A:G	rs148938775	A	G	A	Sox2_MA0143.3	13	0	+	0	0	.
chr3	187064428	187064429	chr3:187064429:C:T	rs113569169	C	T	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr3	187130449	187130450	chr3:187130450:C:T	rs188881635	C	T	C	Sox2_MA0143.3	23	0	+	0	0	.
chr3	187197461	187197462	chr3:187197462:G:T	rs187820649	G	T	G	Sox2_MA0143.3	18	0	-	0	0	.
chr3	187228633	187228634	chr3:187228634:C:T	rs4315676	C	T	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr3	187275201	187275202	chr3:187275202:C:T	rs710473	C	T	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr3	187399068	187399069	chr3:187399069:A:T	rs562433417	A	T	A	Sox2_MA0143.3	22	0	-	0	0	.
chr3	187444933	187444934	chr3:187444934:T:C	rs16862123	T	C	C	Sox2_MA0143.3	12	0	-	0	0	.
chr3	187465494	187465495	chr3:187465495:A:G	rs9874793	A	G	A	Sox2_MA0143.3	-10	0	-	0	0	.
chr3	187475459	187475460	chr3:187475460:C:T	rs78012014	C	T	C	Sox2_MA0143.3	11	0	-	0	0	.
chr3	187572476	187572477	chr3:187572477:C:G	rs7614906	C	G	G	Sox2_MA0143.3	18	0	-	0	0	.
chr3	187616352	187616353	chr3:187616353:G:A	rs55669224	G	A	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr3	187669869	187669870	chr3:187669870:T:C	rs17796022	T	C	T	Sox2_MA0143.3	6	1	+	9.019595766176417	2.110840986861197	CCATTGTC
chr3	187812636	187812637	chr3:187812637:C:T	rs62279156	C	T	T	Sox2_MA0143.3	-3	0	+	0	0	.
chr3	187917648	187917649	chr3:187917649:C:G	rs77573927	C	G	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr3	187975980	187975981	chr3:187975981:C:T	rs74772339	C	T	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr3	187984021	187984022	chr3:187984022:C:T	rs77846345	C	T	C	Sox2_MA0143.3	12	0	+	0	0	.
chr3	187990169	187990170	chr3:187990170:C:T	rs78154055	C	T	C	Sox2_MA0143.3	12	0	+	0	0	.
chr3	188021700	188021701	chr3:188021701:G:A	rs55706522	G	A	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr3	188055529	188055530	chr3:188055530:C:T	rs12490314	C	T	C	Sox2_MA0143.3	0	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr3	188229879	188229880	chr3:188229880:G:A	rs6777135	G	A	A	Sox2_MA0143.3	-9	0	+	0	0	.
chr3	188266938	188266939	chr3:188266939:G:A	rs6444272	G	A	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr3	188323254	188323255	chr3:188323255:A:G	rs529100500	A	G	A	Sox2_MA0143.3	13	0	+	0	0	.
chr3	188433271	188433272	chr3:188433272:T:A	rs13080560	T	A	T	Sox2_MA0143.3	-1	0	+	0	0	.
chr3	188585324	188585325	chr3:188585325:A:G	rs150042157	A	G	A	Sox2_MA0143.3	15	0	+	0	0	.
chr3	188673992	188673993	chr3:188673993:T:C	rs543286545	T	C	T	Sox2_MA0143.3	9	0	+	0	0	.
chr3	188749372	188749373	chr3:188749373:T:C	rs1568670	T	C	T	Sox2_MA0143.3	9	0	+	0	0	.
chr3	188749373	188749374	chr3:188749374:A:T	rs1568669	A	T	T	Sox2_MA0143.3	10	0	+	0	0	.
chr3	188812379	188812380	chr3:188812380:C:G	rs1568598	C	G	C	Sox2_MA0143.3	14	0	-	0	0	.
chr3	188829037	188829038	chr3:188829038:A:G	rs9985234	A	G	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr3	188915380	188915381	chr3:188915381:A:G	rs527432739	A	G	A	Sox2_MA0143.3	3	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr3	188948825	188948826	chr3:188948826:C:T	rs9681349	C	T	T	Sox2_MA0143.3	0	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr3	189222722	189222723	chr3:189222723:G:A	rs16864109	G	A	G	Sox2_MA0143.3	-14	0	+	0	0	.
chr3	189236821	189236822	chr3:189236822:T:C	rs6777676	T	C	C	Sox2_MA0143.3	14	0	+	0	0	.
chr3	189270308	189270309	chr3:189270309:A:G	rs7612021	A	G	G	Sox2_MA0143.3	-3	0	+	0	0	.
chr3	189288741	189288742	chr3:189288742:G:C	rs9816309	G	C	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr3	189322723	189322724	chr3:189322724:A:T	rs17489176	A	T	A	Sox2_MA0143.3	-8	0	+	0	0	.
chr3	189341121	189341122	chr3:189341122:G:A	rs139343479	G	A	G	Sox2_MA0143.3	16	0	-	0	0	.
chr3	189370783	189370784	chr3:189370784:G:A	rs182009	G	A	G	Sox2_MA0143.3	12	0	+	0	0	.
chr3	189562013	189562014	chr3:189562014:G:A	rs4322979	G	A	A	Sox2_MA0143.3	25	0	+	0	0	.
chr3	189716222	189716223	chr3:189716223:G:A	rs11709314	G	A	G	Sox2_MA0143.3	24	0	+	0	0	.
chr3	189723574	189723575	chr3:189723575:T:G	rs11715334	T	G	T	Sox2_MA0143.3	23	0	-	0	0	.
chr3	189779241	189779242	chr3:189779242:A:G	rs76620542	A	G	A	Sox2_MA0143.3	8	0	+	0	0	.
chr3	189820098	189820099	chr3:189820099:C:T	rs56104635	C	T	T	Sox2_MA0143.3	14	0	-	0	0	.
chr3	189863203	189863204	chr3:189863204:A:G	rs1913721	A	G	A	Sox2_MA0143.3	15	0	+	0	0	.
chr3	189863215	189863216	chr3:189863216:G:T	rs1913722	G	T	G	Sox2_MA0143.3	27	0	+	0	0	.
chr3	189868062	189868063	chr3:189868063:C:T	rs7653848	C	T	T	Sox2_MA0143.3	10	0	+	0	0	.
chr3	189898965	189898966	chr3:189898966:T:C	rs73892217	T	C	T	Sox2_MA0143.3	2	1	-	8.676919043985553	2.5582713367092715	CCATTGTG
chr3	189898972	189898973	chr3:189898973:C:G	rs9867709	C	G	C	Sox2_MA0143.3	-5	0	-	0	0	.
chr3	189938255	189938256	chr3:189938256:G:A	rs146835344	G	A	G	Sox2_MA0143.3	23	0	+	0	0	.
chr3	190012251	190012252	chr3:190012252:G:A	rs73890161	G	A	G	Sox2_MA0143.3	25	0	-	0	0	.
chr3	190035917	190035918	chr3:190035918:A:C	rs1719615	A	C	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr3	190040308	190040309	chr3:190040309:T:C	rs2594173	T	C	T	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr3	190041775	190041776	chr3:190041776:G:A	rs1719611	G	A	A	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr3	190042927	190042928	chr3:190042928:G:A	rs1547541	G	A	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr3	190061093	190061094	chr3:190061094:A:G	rs1526031	A	G	A	Sox2_MA0143.3	2	1	+	9.613475778572903	3.494828071296623	CCATTGTT
chr3	190170100	190170101	chr3:190170101:G:A	rs710601	G	A	G	Sox2_MA0143.3	11	0	-	0	0	.
chr3	190170114	190170115	chr3:190170115:T:C	rs7613871	T	C	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr3	190239408	190239409	chr3:190239409:C:T	rs6784940	C	T	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr3	190292539	190292540	chr3:190292540:C:T	rs117127446	C	T	C	Sox2_MA0143.3	26	0	+	0	0	.
chr3	190505608	190505609	chr3:190505609:A:C	rs6792491	A	C	A	Sox2_MA0143.3	2	1	-	8.864090315184848	2.5582713367092715	CCTTTGTG
chr3	190537402	190537403	chr3:190537403:C:T	rs9876152	C	T	T	Sox2_MA0143.3	-7	0	+	0	0	.
chr3	190605466	190605467	chr3:190605467:C:G	rs3773949	C	G	G	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr3	190605489	190605490	chr3:190605490:C:T	rs73060200	C	T	C	Sox2_MA0143.3	23	0	+	0	0	.
chr3	190611727	190611728	chr3:190611728:T:C	rs9841058	T	C	T	Sox2_MA0143.3	-10	0	-	0	0	.
chr3	190874121	190874122	chr3:190874122:G:A	rs10937448	G	A	A	Sox2_MA0143.3	10	0	+	0	0	.
chr3	191032194	191032195	chr3:191032195:C:T	rs13082574	C	T	C	Sox2_MA0143.3	5	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr3	191167695	191167696	chr3:191167696:A:G	rs9864798	A	G	A	Sox2_MA0143.3	-10	0	-	0	0	.
chr3	191176223	191176224	chr3:191176224:A:C	rs9836534	A	C	A	Sox2_MA0143.3	-5	0	-	0	0	.
chr3	191291297	191291298	chr3:191291298:T:C	rs2117544	T	C	T	Sox2_MA0143.3	-2	0	-	0	0	.
chr3	191329260	191329261	chr3:191329261:G:A	rs182001630	G	A	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr3	191350295	191350296	chr3:191350296:A:G	rs76001579	A	G	A	Sox2_MA0143.3	17	0	-	0	0	.
chr3	191373530	191373531	chr3:191373531:C:T	rs1435061	C	T	T	Sox2_MA0143.3	-6	0	+	0	0	.
chr3	191373554	191373555	chr3:191373555:G:A	rs1435060	G	A	G	Sox2_MA0143.3	18	0	+	0	0	.
chr3	191376129	191376130	chr3:191376130:G:C	rs17754685	G	C	G	Sox2_MA0143.3	17	0	-	0	0	.
chr3	191444039	191444040	chr3:191444040:C:T	rs76749148	C	T	C	Sox2_MA0143.3	1	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr3	191462815	191462816	chr3:191462816:T:G	rs9843991	T	G	T	Sox2_MA0143.3	26	0	-	0	0	.
chr3	191512611	191512612	chr3:191512612:A:T	rs1464948	A	T	A	Sox2_MA0143.3	-14	0	-	0	0	.
chr3	191743540	191743541	chr3:191743541:T:C	rs709089	T	C	T	Sox2_MA0143.3	-4	0	+	0	0	.
chr3	191743571	191743572	chr3:191743572:T:A	rs731309	T	A	T	Sox2_MA0143.3	27	0	+	0	0	.
chr3	191865143	191865144	chr3:191865144:C:T	rs779320	C	T	c	Sox2_MA0143.3	13	0	+	0	0	.
chr3	191919842	191919843	chr3:191919843:T:A	rs6803461	T	A	T	Sox2_MA0143.3	-19	0	-	0	0	.
chr3	191962950	191962951	chr3:191962951:C:T	rs1846587	C	T	T	Sox2_MA0143.3	20	0	+	0	0	.
chr3	192039199	192039200	chr3:192039200:T:A	rs80025923	T	A	T	Sox2_MA0143.3	22	0	+	0	0	.
chr3	192057333	192057334	chr3:192057334:G:T	rs10755147	G	T	T	Sox2_MA0143.3	7	1	-	9.206767037375712	3.5547341015215945	CCTTTGTC
chr3	192129844	192129845	chr3:192129845:G:A	rs1460921	G	A	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr3	192211994	192211995	chr3:192211995:C:T	rs1552832	C	T	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr3	192449188	192449189	chr3:192449189:C:T	rs141499968	C	T	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr3	192516382	192516383	chr3:192516383:T:C	rs62294934	T	C	T	Sox2_MA0143.3	11	0	+	0	0	.
chr3	192542372	192542373	chr3:192542373:T:C	rs9810948	T	C	T	Sox2_MA0143.3	11	0	+	0	0	.
chr3	192567390	192567391	chr3:192567391:A:C	rs1875733	A	C	C	Sox2_MA0143.3	19	0	-	0	0	.
chr3	192597497	192597498	chr3:192597498:A:G	rs13063479	A	G	A	Sox2_MA0143.3	19	0	-	0	0	.
chr3	192652948	192652949	chr3:192652949:A:T	rs9852619	A	T	A	Sox2_MA0143.3	-18	0	+	0	0	.
chr3	192745430	192745431	chr3:192745431:C:T	rs7650325	C	T	T	Sox2_MA0143.3	-12	0	+	0	0	.
chr3	192857739	192857740	chr3:192857740:A:G	rs146401863	A	G	A	Sox2_MA0143.3	25	0	-	0	0	.
chr3	193046698	193046699	chr3:193046699:A:G	rs28529523	A	G	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr3	193087454	193087455	chr3:193087455:T:G	rs62288408	T	G	G	Sox2_MA0143.3	13	0	+	0	0	.
chr3	193268737	193268738	chr3:193268738:G:A	rs2367474	G	A	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr3	193313313	193313314	chr3:193313314:A:T	rs143143283	A	T	A	Sox2_MA0143.3	-11	0	-	0	0	.
chr3	193382248	193382249	chr3:193382249:G:A	rs73890406	G	A	G	Sox2_MA0143.3	12	0	-	0	0	.
chr3	193572426	193572427	chr3:193572427:T:C	rs169464	T	C	t	Sox2_MA0143.3	-2	0	+	0	0	.
chr3	193614398	193614399	chr3:193614399:T:C	rs35610272	T	C	T	Sox2_MA0143.3	-16	0	+	0	0	.
chr3	193731139	193731140	chr3:193731140:C:T	rs62287190	C	T	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr3	193732601	193732602	chr3:193732602:T:A	rs550049097	T	A	T	Sox2_MA0143.3	6	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr3	193735153	193735154	chr3:193735154:A:G	rs9790089	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr3	193735167	193735168	chr3:193735168:C:G	rs137862202	C	G	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr3	193794815	193794816	chr3:193794816:C:T	rs12496793	C	T	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr3	193825927	193825928	chr3:193825928:C:T	rs1797853	C	T	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr3	193831618	193831619	chr3:193831619:T:C	rs1146045	T	C	T	Sox2_MA0143.3	14	0	+	0	0	.
chr3	193845058	193845059	chr3:193845059:T:C	rs2651149	T	C	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr3	193869821	193869822	chr3:193869822:A:C	rs12635903	A	C	A	Sox2_MA0143.3	-2	0	-	0	0	.
chr3	193869823	193869824	chr3:193869824:T:A	rs74330989	T	A	T	Sox2_MA0143.3	-4	0	-	0	0	.
chr3	193869824	193869825	chr3:193869825:G:A	rs113824449	G	A	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr3	193874428	193874429	chr3:193874429:G:A	rs2630236	G	A	G	Sox2_MA0143.3	-12	0	+	0	0	.
chr3	193875243	193875244	chr3:193875244:C:T	rs1165648	C	T	C	Sox2_MA0143.3	26	0	-	0	0	.
chr3	193875411	193875412	chr3:193875412:G:A	rs1165649	G	A	A	Sox2_MA0143.3	-6	0	-	0	0	.
chr3	193978273	193978274	chr3:193978274:A:G	rs142482047	A	G	A	Sox2_MA0143.3	-2	0	+	0	0	.
chr3	193987385	193987386	chr3:193987386:A:C	rs79115115	A	C	C	Sox2_MA0143.3	25	0	-	0	0	.
chr3	193987415	193987416	chr3:193987416:G:A	rs115698027	G	A	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr3	194040807	194040808	chr3:194040808:T:C	rs6765924	T	C	C	Sox2_MA0143.3	10	0	-	0	0	.
chr3	194043927	194043928	chr3:194043928:A:G	rs71635024	A	G	A	Sox2_MA0143.3	23	0	-	0	0	.
chr3	194054759	194054760	chr3:194054760:G:A	rs74705738	G	A	G	Sox2_MA0143.3	12	0	-	0	0	.
chr3	194087625	194087626	chr3:194087626:A:G	rs145114449	A	G	A	Sox2_MA0143.3	2	1	+	9.613475778572903	3.494828071296623	CCATTGTT
chr3	194142165	194142166	chr3:194142166:C:T	rs59201608	C	T	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr3	194198391	194198392	chr3:194198392:G:A	rs59381142	G	A	G	Sox2_MA0143.3	15	0	-	0	0	.
chr3	194286133	194286134	chr3:194286134:G:C	rs74650275	G	C	G	Sox2_MA0143.3	0	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr3	194286951	194286952	chr3:194286952:C:T	rs750886230	C	T	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr3	194339564	194339565	chr3:194339565:G:A	rs6783012	G	A	g	Sox2_MA0143.3	23	0	+	0	0	.
chr3	194389275	194389276	chr3:194389276:C:T	rs60900199	C	T	T	Sox2_MA0143.3	5	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr3	194472433	194472434	chr3:194472434:A:G	rs146946073	A	G	A	Sox2_MA0143.3	-10	0	+	0	0	.
chr3	194488468	194488469	chr3:194488469:G:T	rs138377277	G	T	G	Sox2_MA0143.3	1	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr3	194527461	194527462	chr3:194527462:C:T	rs73209077	C	T	C	Sox2_MA0143.3	1	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr3	194579387	194579388	chr3:194579388:C:G	rs75930523	C	G	C	Sox2_MA0143.3	7	1	+	9.019595766176417	8.676919043985553	CCATTGTC
chr3	194661502	194661503	chr3:194661503:C:T	rs114997105	C	T	C	Sox2_MA0143.3	15	0	-	0	0	.
chr3	194661996	194661997	chr3:194661997:A:C	rs9855926	A	C	A	Sox2_MA0143.3	12	0	-	0	0	.
chr3	194781743	194781744	chr3:194781744:G:C	rs6806407	G	C	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr3	194850606	194850607	chr3:194850607:A:G	rs11707545	A	G	G	Sox2_MA0143.3	2	1	-	8.864090315184848	2.5582713367092715	CCTTTGTG
chr3	194858994	194858995	chr3:194858995:A:G	rs6779877	A	G	A	Sox2_MA0143.3	-2	0	+	0	0	.
chr3	194976978	194976979	chr3:194976979:T:C	rs7650777	T	C	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr3	194995096	194995097	chr3:194995097:T:C	rs2720922	T	C	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr3	195015038	195015039	chr3:195015039:C:G	rs6778234	C	G	C	Sox2_MA0143.3	10	0	+	0	0	.
chr3	195056348	195056349	chr3:195056349:C:T	rs12485500	C	T	T	Sox2_MA0143.3	-11	0	-	0	0	.
chr3	195102981	195102982	chr3:195102982:A:G	rs71317943	A	G	A	Sox2_MA0143.3	22	0	-	0	0	.
chr3	195108695	195108696	chr3:195108696:A:G	rs4677658	A	G	G	Sox2_MA0143.3	17	0	-	0	0	.
chr3	195139687	195139688	chr3:195139688:C:T	rs7633885	C	T	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr3	195150750	195150751	chr3:195150751:A:T	rs62285219	A	T	A	Sox2_MA0143.3	4	1	-	9.800647049772198	2.8918922704569785	CCTTTGTT
chr3	195150758	195150759	chr3:195150759:A:G	rs28569214	A	G	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr3	195150771	195150772	chr3:195150772:G:A	chr3:195150772:G:A	G	A	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr3	195160986	195160987	chr3:195160987:A:G	rs12490970	A	G	A	Sox2_MA0143.3	13	0	-	0	0	.
chr3	195169416	195169417	chr3:195169417:A:G	rs10933701	A	G	a	Sox2_MA0143.3	22	0	-	0	0	.
chr3	195173403	195173404	chr3:195173404:T:C	rs7653312	T	C	c	Sox2_MA0143.3	8	0	+	0	0	.
chr3	195183412	195183413	chr3:195183413:T:C	rs58612288	T	C	t	Sox2_MA0143.3	16	0	+	0	0	.
chr3	195221486	195221487	chr3:195221487:G:C	rs74435573	G	C	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr3	195338107	195338108	chr3:195338108:T:C	rs9288744	T	C	C	Sox2_MA0143.3	-20	0	-	0	0	.
chr3	195351653	195351654	chr3:195351654:A:C	rs35589718	A	C	C	Sox2_MA0143.3	3	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr3	195382651	195382652	chr3:195382652:A:G	rs6801750	A	G	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr3	195477948	195477949	chr3:195477949:G:A	rs2686444	G	A	.	Sox2_MA0143.3	18	0	+	0	0	.
chr3	195477951	195477952	chr3:195477952:C:G	rs2641368	C	G	.	Sox2_MA0143.3	21	0	+	0	0	.
chr3	195493609	195493610	chr3:195493610:C:G	rs1245791186	C	G	.	Sox2_MA0143.3	18	0	-	0	0	.
chr3	195493617	195493618	chr3:195493618:T:C	rs200055654	T	C	.	Sox2_MA0143.3	10	0	-	0	0	.
chr3	195493645	195493646	chr3:195493646:C:T	rs1489423021	C	T	.	Sox2_MA0143.3	-18	0	-	0	0	.
chr3	195512161	195512162	chr3:195512162:C:T	rs73065887	C	T	.	Sox2_MA0143.3	14	0	-	0	0	.
chr3	195550108	195550109	chr3:195550109:A:T	rs79136241	A	T	A	Sox2_MA0143.3	-4	0	-	0	0	.
chr3	195557604	195557605	chr3:195557605:G:A	rs823506	G	A	G	Sox2_MA0143.3	10	0	+	0	0	.
chr3	195589774	195589775	chr3:195589775:G:C	rs112783431	G	C	G	Sox2_MA0143.3	17	0	-	0	0	.
chr3	195600038	195600039	chr3:195600039:C:T	rs150316102	C	T	c	Sox2_MA0143.3	-16	0	-	0	0	.
chr3	195669460	195669461	chr3:195669461:A:G	rs767801273	A	G	-	Sox2_MA0143.3	-19	0	-	0	0	.
chr3	195672748	195672749	chr3:195672749:C:G	rs9840981	C	G	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr3	195686079	195686080	chr3:195686080:C:G	rs71317993	C	G	C	Sox2_MA0143.3	13	0	+	0	0	.
chr3	195698781	195698782	chr3:195698782:C:A	rs3107777	C	A	A	Sox2_MA0143.3	12	0	-	0	0	.
chr3	195731415	195731416	chr3:195731416:C:T	rs115066379	C	T	c	Sox2_MA0143.3	13	0	+	0	0	.
chr3	195733710	195733711	chr3:195733711:C:T	rs2251332	C	T	c	Sox2_MA0143.3	-17	0	+	0	0	.
chr3	195733711	195733712	chr3:195733712:A:G	rs2251333	A	G	N	Sox2_MA0143.3	-16	0	+	0	0	.
chr3	195819628	195819629	chr3:195819629:C:T	rs558267517	C	T	c	Sox2_MA0143.3	-8	0	-	0	0	.
chr3	195930858	195930859	chr3:195930859:C:T	rs113144487	C	T	C	Sox2_MA0143.3	15	0	+	0	0	.
chr3	195961426	195961427	chr3:195961427:C:A	rs111545989	C	A	-	Sox2_MA0143.3	19	0	-	0	0	.
chr3	195961442	195961443	chr3:195961443:A:G	rs114155151	A	G	-	Sox2_MA0143.3	3	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr3	195978951	195978952	chr3:195978952:G:A	rs575592592	G	A	-	Sox2_MA0143.3	10	0	+	0	0	.
chr3	195978964	195978965	chr3:195978965:T:C	rs77412488	T	C	-	Sox2_MA0143.3	23	0	+	0	0	.
chr3	196008198	196008199	chr3:196008199:C:T	rs62283454	C	T	C	Sox2_MA0143.3	12	0	+	0	0	.
chr3	196013334	196013335	chr3:196013335:A:G	rs73208043	A	G	A	Sox2_MA0143.3	12	0	+	0	0	.
chr3	196057776	196057777	chr3:196057777:T:C	rs41297523	T	C	T	Sox2_MA0143.3	3	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr3	196110698	196110699	chr3:196110699:T:C	rs78411941	T	C	T	Sox2_MA0143.3	6	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr3	196110716	196110717	chr3:196110717:G:A	rs6583290	G	A	A	Sox2_MA0143.3	24	0	+	0	0	.
chr3	196167085	196167086	chr3:196167086:A:G	rs9856595	A	G	G	Sox2_MA0143.3	18	0	-	0	0	.
chr3	196183462	196183463	chr3:196183463:G:A	rs556974621	G	A	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr3	196196790	196196791	chr3:196196791:G:A	rs139892600	G	A	G	Sox2_MA0143.3	25	0	-	0	0	.
chr3	196196822	196196823	chr3:196196823:C:T	rs375300803	C	T	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr3	196196823	196196824	chr3:196196824:G:A	rs141858230	G	A	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr3	196201982	196201983	chr3:196201983:G:A	rs11924930	G	A	G	Sox2_MA0143.3	8	0	+	0	0	.
chr3	196214344	196214345	chr3:196214345:C:G	rs7642243	C	G	G	Sox2_MA0143.3	12	0	-	0	0	.
chr3	196233882	196233883	chr3:196233883:A:G	rs72611186	A	G	A	Sox2_MA0143.3	-7	0	-	0	0	.
chr3	196325649	196325650	chr3:196325650:G:A	rs4916484	G	A	G	Sox2_MA0143.3	14	0	-	0	0	.
chr3	196598552	196598553	chr3:196598553:C:T	rs6583327	C	T	C	Sox2_MA0143.3	13	0	-	0	0	.
chr3	196598554	196598555	chr3:196598555:T:C	rs2086894	T	C	T	Sox2_MA0143.3	11	0	-	0	0	.
chr3	196598565	196598566	chr3:196598566:G:A	rs71323733	G	A	G	Sox2_MA0143.3	0	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr3	196621506	196621507	chr3:196621507:T:C	rs4346577	T	C	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr3	196666291	196666292	chr3:196666292:G:A	rs190258821	G	A	G	Sox2_MA0143.3	-3	0	+	0	0	.
chr3	196677494	196677495	chr3:196677495:T:A	rs1718445	T	A	A	Sox2_MA0143.3	15	0	-	0	0	.
chr3	196685021	196685022	chr3:196685022:C:G	rs149765080	C	G	C	Sox2_MA0143.3	21	0	-	0	0	.
chr3	196685029	196685030	chr3:196685030:A:G	chr3:196685030:A:G	A	G	A	Sox2_MA0143.3	13	0	-	0	0	.
chr3	196688781	196688782	chr3:196688782:A:G	rs843512	A	G	G	Sox2_MA0143.3	-2	0	+	0	0	.
chr3	196814134	196814135	chr3:196814135:C:T	rs77051181	C	T	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr3	196977310	196977311	chr3:196977311:T:C	rs540210	T	C	C	Sox2_MA0143.3	15	0	+	0	0	.
chr3	197038600	197038601	chr3:197038601:C:A	rs34366858	C	A	c	Sox2_MA0143.3	25	0	+	0	0	.
chr3	197139870	197139871	chr3:197139871:T:C	rs3773853	T	C	T	Sox2_MA0143.3	-18	0	-	0	0	.
chr3	197145206	197145207	chr3:197145207:T:C	rs76557643	T	C	T	Sox2_MA0143.3	24	0	+	0	0	.
chr3	197316194	197316195	chr3:197316195:A:G	rs13059981	A	G	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr3	197395375	197395376	chr3:197395376:G:A	rs35913071	G	A	A	Sox2_MA0143.3	0	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr3	197419014	197419015	chr3:197419015:G:A	rs13095203	G	A	A	Sox2_MA0143.3	-10	0	+	0	0	.
chr3	197459162	197459163	chr3:197459163:A:G	rs6781677	A	G	G	Sox2_MA0143.3	-3	0	-	0	0	.
chr3	197476496	197476497	chr3:197476497:A:T	rs62285012	A	T	A	Sox2_MA0143.3	11	0	+	0	0	.
chr3	197483482	197483483	chr3:197483483:C:T	rs9813057	C	T	T	Sox2_MA0143.3	-19	0	+	0	0	.
chr3	197542252	197542253	chr3:197542253:T:C	rs60524668	T	C	t	Sox2_MA0143.3	-12	0	-	0	0	.
chr3	197552494	197552495	chr3:197552495:T:C	rs111336443	T	C	T	Sox2_MA0143.3	6	1	+	9.019595766176417	2.110840986861197	CCATTGTC
chr3	197552585	197552586	chr3:197552586:C:T	rs6782014	C	T	T	Sox2_MA0143.3	-5	0	+	0	0	.
chr3	197572046	197572047	chr3:197572047:G:C	rs6583230	G	C	G	Sox2_MA0143.3	0	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr3	197601004	197601005	chr3:197601005:G:C	rs7613131	G	C	.	Sox2_MA0143.3	23	0	+	0	0	.
chr3	197690797	197690798	chr3:197690798:A:G	rs73894305	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr3	197746814	197746815	chr3:197746815:C:T	rs9862273	C	T	c	Sox2_MA0143.3	9	0	-	0	0	.
chr3	197746835	197746836	chr3:197746836:C:A	rs529864394	C	A	c	Sox2_MA0143.3	-12	0	-	0	0	.
chr3	197789496	197789497	chr3:197789497:C:T	rs141599254	C	T	C	Sox2_MA0143.3	13	0	+	0	0	.
chr3	197799329	197799330	chr3:197799330:A:G	rs841672	A	G	A	Sox2_MA0143.3	12	0	-	0	0	.
chr3	198139812	198139813	chr3:198139813:T:C	rs71619419	T	C	t	Sox2_MA0143.3	23	0	-	0	0	.
chr4	16774	16775	chr4:16775:G:A	rs2227184	G	A	.	Sox2_MA0143.3	9	0	+	0	0	.
chr4	174090	174091	chr4:174091:T:C	rs10030553	T	C	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr4	188042	188043	chr4:188043:A:G	rs6817633	A	G	A	Sox2_MA0143.3	-19	0	+	0	0	.
chr4	195079	195080	chr4:195080:C:T	rs113650514	C	T	C	Sox2_MA0143.3	10	0	+	0	0	.
chr4	243494	243495	chr4:243495:G:C	rs11729659	G	C	.	Sox2_MA0143.3	25	0	+	0	0	.
chr4	476254	476255	chr4:476255:G:A	rs75242523	G	A	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr4	630169	630170	chr4:630170:T:C	rs67703486	T	C	T	Sox2_MA0143.3	18	0	-	0	0	.
chr4	636657	636658	chr4:636658:G:A	rs36060793	G	A	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr4	660091	660092	chr4:660092:C:T	rs35894204	C	T	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr4	674465	674466	chr4:674466:T:A	rs373680707	T	A	T	Sox2_MA0143.3	-9	0	-	0	0	.
chr4	797173	797174	chr4:797174:C:G	rs77947016	C	G	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr4	837293	837294	chr4:837294:A:G	rs11724390	A	G	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr4	837392	837393	chr4:837393:G:A	rs11736866	G	A	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr4	844817	844818	chr4:844818:G:A	rs7695136	G	A	G	Sox2_MA0143.3	22	0	-	0	0	.
chr4	854491	854492	chr4:854492:G:T	rs4690340	G	T	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr4	858524	858525	chr4:858525:C:T	rs1564282	C	T	C	Sox2_MA0143.3	21	0	-	0	0	.
chr4	875518	875519	chr4:875519:C:T	rs187506674	C	T	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr4	970570	970571	chr4:970571:C:T	rs11248060	C	T	T	Sox2_MA0143.3	-19	0	+	0	0	.
chr4	1012279	1012280	chr4:1012280:A:G	rs774046429	A	G	A	Sox2_MA0143.3	-13	0	+	0	0	.
chr4	1014925	1014926	chr4:1014926:C:G	rs184316949	C	G	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr4	1014926	1014927	chr4:1014927:C:G	rs948274969	C	G	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr4	1033488	1033489	chr4:1033489:C:T	rs11726058	C	T	c	Sox2_MA0143.3	9	0	+	0	0	.
chr4	1035660	1035661	chr4:1035661:G:A	chr4:1035661:G:A	G	A	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr4	1050182	1050183	chr4:1050183:G:A	rs4690218	G	A	G	Sox2_MA0143.3	1	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr4	1072980	1072981	chr4:1072981:C:T	rs17728127	C	T	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr4	1072981	1072982	chr4:1072982:G:A	rs142228667	G	A	G	Sox2_MA0143.3	-3	0	+	0	0	.
chr4	1073007	1073008	chr4:1073008:G:A	rs201543039	G	A	G	Sox2_MA0143.3	23	0	+	0	0	.
chr4	1246198	1246199	chr4:1246199:G:A	rs575928409	G	A	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr4	1294189	1294190	chr4:1294190:A:G	rs73069979	A	G	A	Sox2_MA0143.3	-9	0	+	0	0	.
chr4	1294212	1294213	chr4:1294213:A:G	rs113254479	A	G	A	Sox2_MA0143.3	14	0	+	0	0	.
chr4	1297548	1297549	chr4:1297549:C:T	rs3817604	C	T	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr4	1297674	1297675	chr4:1297675:C:G	rs73069999	C	G	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr4	1297689	1297690	chr4:1297690:C:T	rs2293632	C	T	C	Sox2_MA0143.3	7	1	+	9.206767037375712	9.800647049772198	CCTTTGTC
chr4	1315962	1315963	chr4:1315963:G:C	rs114985501	G	C	-	Sox2_MA0143.3	-3	0	+	0	0	.
chr4	1363279	1363280	chr4:1363280:A:G	rs4974555	A	G	A	Sox2_MA0143.3	24	0	-	0	0	.
chr4	1421873	1421874	chr4:1421874:C:T	rs13105025	C	T	T	Sox2_MA0143.3	-15	0	+	0	0	.
chr4	1421909	1421910	chr4:1421910:C:T	rs6814036	C	T	C	Sox2_MA0143.3	21	0	+	0	0	.
chr4	1518424	1518425	chr4:1518425:G:A	rs113921842	G	A	g	Sox2_MA0143.3	10	0	-	0	0	.
chr4	1524382	1524383	chr4:1524383:C:T	rs7671085	C	T	-	Sox2_MA0143.3	0	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr4	1579957	1579958	chr4:1579958:A:T	rs11248099	A	T	A	Sox2_MA0143.3	-19	0	-	0	0	.
chr4	1602421	1602422	chr4:1602422:G:A	rs75214453	G	A	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr4	1622315	1622316	chr4:1622316:C:T	rs28754473	C	T	c	Sox2_MA0143.3	-1	0	-	0	0	.
chr4	1622397	1622398	chr4:1622398:C:G	rs4865444	C	G	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr4	1683115	1683116	chr4:1683116:T:C	rs115061027	T	C	T	Sox2_MA0143.3	-19	0	-	0	0	.
chr4	1710048	1710049	chr4:1710049:G:A	rs78364480	G	A	G	Sox2_MA0143.3	20	0	-	0	0	.
chr4	1726392	1726393	chr4:1726393:A:C	rs2282763	A	C	A	Sox2_MA0143.3	-16	0	+	0	0	.
chr4	1794387	1794388	chr4:1794388:G:A	rs17880324	G	A	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr4	1872000	1872001	chr4:1872001:C:T	rs370135802	C	T	C	Sox2_MA0143.3	14	0	+	0	0	.
chr4	1890095	1890096	chr4:1890096:T:C	rs114209896	T	C	T	Sox2_MA0143.3	8	0	+	0	0	.
chr4	1998530	1998531	chr4:1998531:A:C	rs506996	A	C	C	Sox2_MA0143.3	14	0	-	0	0	.
chr4	1998535	1998536	chr4:1998536:G:A	rs188871747	G	A	G	Sox2_MA0143.3	9	0	-	0	0	.
chr4	2024361	2024362	chr4:2024362:T:G	rs79503657	T	G	T	Sox2_MA0143.3	-7	0	+	0	0	.
chr4	2042583	2042584	chr4:2042584:C:A	rs7654492	C	A	C	Sox2_MA0143.3	8	0	+	0	0	.
chr4	2058861	2058862	chr4:2058862:G:A	rs990142795	G	A	G	Sox2_MA0143.3	21	0	-	0	0	.
chr4	2083619	2083620	chr4:2083620:G:A	rs35972243	G	A	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr4	2191792	2191793	chr4:2191793:G:T	rs7689629	G	T	T	Sox2_MA0143.3	0	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr4	2206520	2206521	chr4:2206521:G:A	rs565738615	G	A	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr4	2234471	2234472	chr4:2234472:C:T	rs17132382	C	T	C	Sox2_MA0143.3	5	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr4	2254988	2254989	chr4:2254989:A:G	rs2236998	A	G	G	Sox2_MA0143.3	6	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr4	2280951	2280952	chr4:2280952:G:T	rs55828254	G	T	G	Sox2_MA0143.3	8	0	-	0	0	.
chr4	2343587	2343588	chr4:2343588:T:G	rs3828563	T	G	T	Sox2_MA0143.3	13	0	-	0	0	.
chr4	2359555	2359556	chr4:2359556:G:A	rs11737085	G	A	G	Sox2_MA0143.3	9	0	-	0	0	.
chr4	2369355	2369356	chr4:2369356:C:A	rs10011996	C	A	C	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr4	2369381	2369382	chr4:2369382:G:T	rs3128813	G	T	G	Sox2_MA0143.3	26	0	+	0	0	.
chr4	2391376	2391377	chr4:2391377:T:C	rs79372528	T	C	T	Sox2_MA0143.3	16	0	+	0	0	.
chr4	2484995	2484996	chr4:2484996:C:T	rs78472434	C	T	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr4	2535506	2535507	chr4:2535507:T:C	rs542577095	T	C	T	Sox2_MA0143.3	-3	0	+	0	0	.
chr4	2535530	2535531	chr4:2535531:G:A	rs144836783	G	A	G	Sox2_MA0143.3	21	0	+	0	0	.
chr4	2686762	2686763	chr4:2686763:C:G	rs10937923	C	G	c	Sox2_MA0143.3	10	0	-	0	0	.
chr4	2723860	2723861	chr4:2723861:G:C	rs79582601	G	C	G	Sox2_MA0143.3	17	0	+	0	0	.
chr4	2779512	2779513	chr4:2779513:A:G	rs6422311	A	G	-	Sox2_MA0143.3	25	0	+	0	0	.
chr4	2818512	2818513	chr4:2818513:G:A	rs1006431857	G	A	G	Sox2_MA0143.3	19	0	-	0	0	.
chr4	2818533	2818534	chr4:2818534:G:A	rs28562583	G	A	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr4	2820579	2820580	chr4:2820580:T:C	rs56323343	T	C	T	Sox2_MA0143.3	-15	0	+	0	0	.
chr4	2827139	2827140	chr4:2827140:C:T	rs41264715	C	T	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr4	2845071	2845072	chr4:2845072:C:T	rs1877723	C	T	T	Sox2_MA0143.3	-5	0	-	0	0	.
chr4	3009525	3009526	chr4:3009526:C:T	rs55796435	C	T	C	Sox2_MA0143.3	9	0	+	0	0	.
chr4	3011177	3011178	chr4:3011178:C:T	rs147376333	C	T	C	Sox2_MA0143.3	15	0	-	0	0	.
chr4	3011852	3011853	chr4:3011853:A:G	rs6846128	A	G	G	Sox2_MA0143.3	6	1	-	8.676919043985553	1.7681642646703326	CCATTGTG
chr4	3011857	3011858	chr4:3011858:G:A	rs111813517	G	A	G	Sox2_MA0143.3	1	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr4	3034874	3034875	chr4:3034875:G:A	rs2798298	G	A	A	Sox2_MA0143.3	-17	0	+	0	0	.
chr4	3034902	3034903	chr4:3034903:T:C	rs2857839	T	C	C	Sox2_MA0143.3	11	0	+	0	0	.
chr4	3108459	3108460	chr4:3108460:C:T	rs77080756	C	T	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr4	3193476	3193477	chr4:3193477:C:A	rs147406445	C	A	C	Sox2_MA0143.3	0	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr4	3219556	3219557	chr4:3219557:A:G	rs138923576	A	G	A	Sox2_MA0143.3	-15	0	+	0	0	.
chr4	3219598	3219599	chr4:3219599:C:T	rs362323	C	T	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr4	3253039	3253040	chr4:3253040:T:A	rs3129321	T	A	A	Sox2_MA0143.3	3	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr4	3256645	3256646	chr4:3256646:A:G	rs1006798	A	G	G	Sox2_MA0143.3	21	0	-	0	0	.
chr4	3304071	3304072	chr4:3304072:A:G	rs142808564	A	G	A	Sox2_MA0143.3	-17	0	-	0	0	.
chr4	3306227	3306228	chr4:3306228:C:G	rs73193357	C	G	C	Sox2_MA0143.3	21	0	+	0	0	.
chr4	3340496	3340497	chr4:3340497:C:T	rs1462734570	C	T	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr4	3360805	3360806	chr4:3360806:G:C	rs79688756	G	C	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr4	3368450	3368451	chr4:3368451:T:G	rs112257814	T	G	t	Sox2_MA0143.3	-7	0	+	0	0	.
chr4	3405966	3405967	chr4:3405967:G:A	rs1962767	G	A	G	Sox2_MA0143.3	10	0	-	0	0	.
chr4	3410468	3410469	chr4:3410469:A:G	rs4690093	A	G	G	Sox2_MA0143.3	9	0	+	0	0	.
chr4	3491814	3491815	chr4:3491815:T:A	rs2699417	T	A	A	Sox2_MA0143.3	16	0	+	0	0	.
chr4	3494330	3494331	chr4:3494331:C:T	rs2252054	C	T	c	Sox2_MA0143.3	11	0	+	0	0	.
chr4	3502466	3502467	chr4:3502467:A:G	rs2858022	A	G	G	Sox2_MA0143.3	4	1	-	8.676919043985553	1.7681642646703322	CCATTGTG
chr4	3516462	3516463	chr4:3516463:C:T	rs1800492	C	T	C	Sox2_MA0143.3	23	0	+	0	0	.
chr4	3518573	3518574	chr4:3518574:C:T	rs1800489	C	T	C	Sox2_MA0143.3	24	0	-	0	0	.
chr4	3587253	3587254	chr4:3587254:A:G	rs13125192	A	G	a	Sox2_MA0143.3	2	1	-	9.800647049772198	3.494828071296623	CCTTTGTT
chr4	3604680	3604681	chr4:3604681:G:A	rs112369857	G	A	G	Sox2_MA0143.3	14	0	+	0	0	.
chr4	3631931	3631932	chr4:3631932:A:G	rs28683679	A	G	A	Sox2_MA0143.3	-6	0	-	0	0	.
chr4	3635351	3635352	chr4:3635352:C:T	rs74731084	C	T	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr4	3703861	3703862	chr4:3703862:C:T	rs28579040	C	T	C	Sox2_MA0143.3	20	0	-	0	0	.
chr4	3716666	3716667	chr4:3716667:T:C	rs16844810	T	C	C	Sox2_MA0143.3	20	0	+	0	0	.
chr4	3716668	3716669	chr4:3716669:T:C	rs17206478	T	C	T	Sox2_MA0143.3	22	0	+	0	0	.
chr4	3722775	3722776	chr4:3722776:T:C	rs2857973	T	C	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr4	3724734	3724735	chr4:3724735:C:G	rs539112829	C	G	C	Sox2_MA0143.3	24	0	-	0	0	.
chr4	3767772	3767773	chr4:3767773:C:T	rs7434630	C	T	C	Sox2_MA0143.3	25	0	+	0	0	.
chr4	3798059	3798060	chr4:3798060:G:A	rs28434522	G	A	G	Sox2_MA0143.3	26	0	-	0	0	.
chr4	3812044	3812045	chr4:3812045:T:C	rs28696987	T	C	T	Sox2_MA0143.3	11	0	-	0	0	.
chr4	3830923	3830924	chr4:3830924:C:T	rs149812207	C	T	C	Sox2_MA0143.3	11	0	+	0	0	.
chr4	3830934	3830935	chr4:3830935:C:G	rs62292160	C	G	C	Sox2_MA0143.3	22	0	+	0	0	.
chr4	3893521	3893522	chr4:3893522:G:A	rs1416351365	G	A	G	Sox2_MA0143.3	22	0	-	0	0	.
chr4	3894791	3894792	chr4:3894792:G:A	rs189480558	G	A	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr4	3894816	3894817	chr4:3894817:T:G	rs28794781	T	G	G	Sox2_MA0143.3	21	0	+	0	0	.
chr4	3947646	3947647	chr4:3947647:C:T	rs6824627	C	T	-	Sox2_MA0143.3	-11	0	+	0	0	.
chr4	3983961	3983962	chr4:3983962:A:C	rs868639155	A	C	a	Sox2_MA0143.3	-7	0	-	0	0	.
chr4	4041763	4041764	chr4:4041764:C:T	rs112622226	C	T	c	Sox2_MA0143.3	-16	0	+	0	0	.
chr4	4162430	4162431	chr4:4162431:G:A	rs113645986	G	A	g	Sox2_MA0143.3	-10	0	+	0	0	.
chr4	4162466	4162467	chr4:4162467:G:A	rs547945365	G	A	g	Sox2_MA0143.3	26	0	+	0	0	.
chr4	4167121	4167122	chr4:4167122:G:A	rs377394083	G	A	-	Sox2_MA0143.3	11	0	-	0	0	.
chr4	4167132	4167133	chr4:4167133:G:C	rs34975019	G	C	-	Sox2_MA0143.3	0	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr4	4168257	4168258	chr4:4168258:G:A	rs10937737	G	A	-	Sox2_MA0143.3	10	0	-	0	0	.
chr4	4244810	4244811	chr4:4244811:C:G	rs4018314	C	G	C	Sox2_MA0143.3	1	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr4	4244813	4244814	chr4:4244814:T:C	rs4018315	T	C	C	Sox2_MA0143.3	4	1	+	9.206767037375712	2.2980122580604916	CCTTTGTC
chr4	4316049	4316050	chr4:4316050:C:T	rs1470264	C	T	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr4	4344881	4344882	chr4:4344882:T:C	rs12696696	T	C	T	Sox2_MA0143.3	6	1	+	9.206767037375712	2.298012258060492	CCTTTGTC
chr4	4404323	4404324	chr4:4404324:T:C	rs9997952	T	C	t	Sox2_MA0143.3	2	1	-	9.613475778572903	3.494828071296623	CCATTGTT
chr4	4462378	4462379	chr4:4462379:A:C	rs75388396	A	C	A	Sox2_MA0143.3	12	0	-	0	0	.
chr4	4542772	4542773	chr4:4542773:G:A	rs71597715	G	A	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr4	4575484	4575485	chr4:4575485:G:C	rs6842024	G	C	G	Sox2_MA0143.3	9	0	-	0	0	.
chr4	4575486	4575487	chr4:4575487:G:A	rs529936792	G	A	G	Sox2_MA0143.3	7	1	-	9.206767037375712	9.800647049772198	CCTTTGTC
chr4	4576140	4576141	chr4:4576141:T:A	rs62289944	T	A	T	Sox2_MA0143.3	4	1	+	3.5547341015215945	-3.3540206777936254	CCTTTGTA
chr4	4594079	4594080	chr4:4594080:C:T	rs751262	C	T	T	Sox2_MA0143.3	5	1	-	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr4	4642547	4642548	chr4:4642548:C:G	rs10937879	C	G	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr4	4643818	4643819	chr4:4643819:G:T	rs4689910	G	T	G	Sox2_MA0143.3	24	0	-	0	0	.
chr4	4671957	4671958	chr4:4671958:G:C	rs7661454	G	C	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr4	4711580	4711581	chr4:4711581:C:T	rs11942710	C	T	C	Sox2_MA0143.3	1	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr4	4723372	4723373	chr4:4723373:G:A	rs56114130	G	A	A	Sox2_MA0143.3	1	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr4	4842819	4842820	chr4:4842820:G:A	rs74839512	G	A	G	Sox2_MA0143.3	21	0	+	0	0	.
chr4	4847246	4847247	chr4:4847247:C:T	rs2087866	C	T	T	Sox2_MA0143.3	-6	0	+	0	0	.
chr4	4887655	4887656	chr4:4887656:T:G	rs4296635	T	G	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr4	4888087	4888088	chr4:4888088:G:T	rs2968668	G	T	T	Sox2_MA0143.3	-8	0	-	0	0	.
chr4	4889420	4889421	chr4:4889421:C:T	rs6817411	C	T	C	Sox2_MA0143.3	19	0	+	0	0	.
chr4	4913268	4913269	chr4:4913269:A:C	rs4588409	A	C	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr4	4913274	4913275	chr4:4913275:C:G	rs143386551	C	G	C	Sox2_MA0143.3	1	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr4	4916243	4916244	chr4:4916244:C:A	rs4639019	C	A	A	Sox2_MA0143.3	17	0	+	0	0	.
chr4	4930717	4930718	chr4:4930718:G:A	rs34594348	G	A	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr4	4943516	4943517	chr4:4943517:G:A	rs79313734	G	A	g	Sox2_MA0143.3	0	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr4	5002332	5002333	chr4:5002333:C:T	rs114503953	C	T	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr4	5002353	5002354	chr4:5002354:G:A	rs60539630	G	A	G	Sox2_MA0143.3	9	0	+	0	0	.
chr4	5012352	5012353	chr4:5012353:A:G	rs79147312	A	G	A	Sox2_MA0143.3	8	0	-	0	0	.
chr4	5160763	5160764	chr4:5160764:G:A	rs10023979	G	A	A	Sox2_MA0143.3	12	0	-	0	0	.
chr4	5211428	5211429	chr4:5211429:C:T	rs4688919	C	T	C	Sox2_MA0143.3	27	0	-	0	0	.
chr4	5217576	5217577	chr4:5217577:T:C	rs7682981	T	C	T	Sox2_MA0143.3	4	1	+	3.5547341015215945	-3.3540206777936254	CCTTTGTA
chr4	5280242	5280243	chr4:5280243:A:G	rs74589698	A	G	A	Sox2_MA0143.3	-19	0	+	0	0	.
chr4	5365829	5365830	chr4:5365830:A:G	rs6850623	A	G	G	Sox2_MA0143.3	21	0	-	0	0	.
chr4	5386152	5386153	chr4:5386153:C:T	rs189714129	C	T	C	Sox2_MA0143.3	12	0	+	0	0	.
chr4	5423013	5423014	chr4:5423014:G:A	rs195098	G	A	A	Sox2_MA0143.3	19	0	+	0	0	.
chr4	5464664	5464665	chr4:5464665:T:G	rs7688517	T	G	T	Sox2_MA0143.3	26	0	+	0	0	.
chr4	5527250	5527251	chr4:5527251:G:C	rs74426603	G	C	G	Sox2_MA0143.3	11	0	-	0	0	.
chr4	5546150	5546151	chr4:5546151:T:G	rs13138206	T	G	T	Sox2_MA0143.3	16	0	+	0	0	.
chr4	5704363	5704364	chr4:5704364:T:C	rs13121214	T	C	C	Sox2_MA0143.3	25	0	-	0	0	.
chr4	5731810	5731811	chr4:5731811:A:G	rs55634350	A	G	A	Sox2_MA0143.3	-3	0	+	0	0	.
chr4	5819894	5819895	chr4:5819895:A:G	rs3774879	A	G	G	Sox2_MA0143.3	4	1	-	9.206767037375712	2.2980122580604916	CCTTTGTC
chr4	5819896	5819897	chr4:5819897:A:T	rs3774880	A	T	A	Sox2_MA0143.3	2	1	-	9.206767037375712	9.019595766176417	CCTTTGTC
chr4	5856122	5856123	chr4:5856123:G:A	rs2276878	G	A	g	Sox2_MA0143.3	-19	0	+	0	0	.
chr4	5887523	5887524	chr4:5887524:A:G	rs3755851	A	G	G	Sox2_MA0143.3	-3	0	+	0	0	.
chr4	5946815	5946816	chr4:5946816:C:T	rs56358856	C	T	c	Sox2_MA0143.3	20	0	+	0	0	.
chr4	5956659	5956660	chr4:5956660:G:A	rs77646648	G	A	G	Sox2_MA0143.3	-11	0	+	0	0	.
chr4	5956685	5956686	chr4:5956686:G:A	rs66841448	G	A	G	Sox2_MA0143.3	15	0	+	0	0	.
chr4	5956692	5956693	chr4:5956693:T:G	chr4:5956693:T:G	T	G	T	Sox2_MA0143.3	22	0	+	0	0	.
chr4	5956757	5956758	chr4:5956758:G:A	chr4:5956758:G:A	G	A	G	Sox2_MA0143.3	19	0	+	0	0	.
chr4	5956761	5956762	chr4:5956762:G:T	rs16837906	G	T	G	Sox2_MA0143.3	23	0	+	0	0	.
chr4	5983176	5983177	chr4:5983177:C:T	rs77645257	C	T	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr4	5994341	5994342	chr4:5994342:C:T	rs17707957	C	T	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr4	5994376	5994377	chr4:5994377:T:C	rs4993355	T	C	C	Sox2_MA0143.3	20	0	+	0	0	.
chr4	5997015	5997016	chr4:5997016:C:G	rs16838037	C	G	G	Sox2_MA0143.3	27	0	-	0	0	.
chr4	6021526	6021527	chr4:6021527:C:G	rs4355331	C	G	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr4	6104707	6104708	chr4:6104708:G:A	rs73795727	G	A	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr4	6104844	6104845	chr4:6104845:G:T	rs559870715	G	T	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr4	6128575	6128576	chr4:6128576:C:T	rs73198072	C	T	T	Sox2_MA0143.3	-5	0	+	0	0	.
chr4	6139810	6139811	chr4:6139811:G:T	rs34997611	G	T	G	Sox2_MA0143.3	26	0	-	0	0	.
chr4	6193942	6193943	chr4:6193943:T:C	rs67889615	T	C	T	Sox2_MA0143.3	22	0	+	0	0	.
chr4	6195133	6195134	chr4:6195134:C:G	rs11729302	C	G	C	Sox2_MA0143.3	5	1	-	9.019595766176417	2.110840986861197	CCATTGTC
chr4	6195146	6195147	chr4:6195147:A:T	rs73200272	A	T	T	Sox2_MA0143.3	-8	0	-	0	0	.
chr4	6202346	6202347	chr4:6202347:T:C	rs11946482	T	C	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr4	6236443	6236444	chr4:6236444:G:A	rs74684467	G	A	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr4	6242697	6242698	chr4:6242698:C:T	rs10017348	C	T	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr4	6271160	6271161	chr4:6271161:G:C	rs4234726	G	C	C	Sox2_MA0143.3	14	0	+	0	0	.
chr4	6274007	6274008	chr4:6274008:G:A	rs17718958	G	A	G	Sox2_MA0143.3	10	0	+	0	0	.
chr4	6293336	6293337	chr4:6293337:A:G	rs10755148	A	G	A	Sox2_MA0143.3	-15	0	+	0	0	.
chr4	6293359	6293360	chr4:6293360:T:A	rs10937717	T	A	T	Sox2_MA0143.3	8	0	+	0	0	.
chr4	6302616	6302617	chr4:6302617:G:A	rs1046320	G	A	G	Sox2_MA0143.3	16	0	-	0	0	.
chr4	6305929	6305930	chr4:6305930:A:G	rs114082424	A	G	A	Sox2_MA0143.3	8	0	+	0	0	.
chr4	6305941	6305942	chr4:6305942:G:A	rs7682228	G	A	G	Sox2_MA0143.3	20	0	+	0	0	.
chr4	6315192	6315193	chr4:6315193:C:G	rs4688992	C	G	G	Sox2_MA0143.3	0	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr4	6320008	6320009	chr4:6320009:G:A	rs1419447966	G	A	G	Sox2_MA0143.3	8	0	+	0	0	.
chr4	6420748	6420749	chr4:6420749:A:C	rs878281	A	C	A	Sox2_MA0143.3	11	0	-	0	0	.
chr4	6447568	6447569	chr4:6447569:C:T	rs181016177	C	T	C	Sox2_MA0143.3	1	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr4	6606659	6606660	chr4:6606660:T:C	rs113928753	T	C	T	Sox2_MA0143.3	-9	0	-	0	0	.
chr4	6645328	6645329	chr4:6645329:G:A	rs4642308	G	A	A	Sox2_MA0143.3	14	0	-	0	0	.
chr4	6667693	6667694	chr4:6667694:T:C	rs4689503	T	C	T	Sox2_MA0143.3	6	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr4	6687928	6687929	chr4:6687929:A:G	rs7696812	A	G	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr4	6701514	6701515	chr4:6701515:T:C	rs73089284	T	C	T	Sox2_MA0143.3	9	0	+	0	0	.
chr4	6710734	6710735	chr4:6710735:C:A	rs4368678	C	A	C	Sox2_MA0143.3	27	0	+	0	0	.
chr4	6716045	6716046	chr4:6716046:G:C	rs115063190	G	C	G	Sox2_MA0143.3	27	0	-	0	0	.
chr4	6716057	6716058	chr4:6716058:A:G	rs572743909	A	G	A	Sox2_MA0143.3	15	0	-	0	0	.
chr4	6752973	6752974	chr4:6752974:G:A	rs4689543	G	A	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr4	6905637	6905638	chr4:6905638:C:T	rs28396694	C	T	C	Sox2_MA0143.3	11	0	+	0	0	.
chr4	6920295	6920296	chr4:6920296:G:T	rs13149411	G	T	G	Sox2_MA0143.3	20	0	+	0	0	.
chr4	6926128	6926129	chr4:6926129:T:C	rs67386718	T	C	T	Sox2_MA0143.3	-20	0	+	0	0	.
chr4	6962526	6962527	chr4:6962527:T:C	rs147761500	T	C	T	Sox2_MA0143.3	20	0	-	0	0	.
chr4	6986437	6986438	chr4:6986438:A:C	rs4234794	A	C	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr4	7065685	7065686	chr4:7065686:A:G	rs4689586	A	G	A	Sox2_MA0143.3	-10	0	-	0	0	.
chr4	7157940	7157941	chr4:7157941:T:A	rs533207625	T	A	T	Sox2_MA0143.3	-6	0	+	0	0	.
chr4	7168433	7168434	chr4:7168434:G:T	rs28429018	G	T	T	Sox2_MA0143.3	-20	0	+	0	0	.
chr4	7168435	7168436	chr4:7168436:T:C	rs28693061	T	C	T	Sox2_MA0143.3	-18	0	+	0	0	.
chr4	7183971	7183972	chr4:7183972:A:T	rs3936663	A	T	A	Sox2_MA0143.3	-16	0	-	0	0	.
chr4	7207209	7207210	chr4:7207210:G:A	rs77018943	G	A	G	Sox2_MA0143.3	23	0	+	0	0	.
chr4	7212326	7212327	chr4:7212327:C:T	chr4:7212327:C:T	C	T	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr4	7212338	7212339	chr4:7212339:G:A	rs4689640	G	A	A	Sox2_MA0143.3	7	1	+	8.864090315184848	3.5547341015215945	CCTTTGTG
chr4	7283901	7283902	chr4:7283902:T:C	rs3913447	T	C	T	Sox2_MA0143.3	-14	0	+	0	0	.
chr4	7351324	7351325	chr4:7351325:C:T	rs13110208	C	T	C	Sox2_MA0143.3	15	0	+	0	0	.
chr4	7383412	7383413	chr4:7383413:C:T	rs28682976	C	T	C	Sox2_MA0143.3	1	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr4	7418456	7418457	chr4:7418457:T:C	rs13105690	T	C	C	Sox2_MA0143.3	25	0	-	0	0	.
chr4	7446853	7446854	chr4:7446854:T:C	rs4443286	T	C	C	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr4	7472525	7472526	chr4:7472526:C:T	rs28479426	C	T	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr4	7472530	7472531	chr4:7472531:G:A	rs28495699	G	A	A	Sox2_MA0143.3	-19	0	-	0	0	.
chr4	7473593	7473594	chr4:7473594:C:G	rs16840348	C	G	C	Sox2_MA0143.3	25	0	-	0	0	.
chr4	7503767	7503768	chr4:7503768:C:T	rs4689766	C	T	C	Sox2_MA0143.3	16	0	-	0	0	.
chr4	7509373	7509374	chr4:7509374:G:A	rs75203057	G	A	A	Sox2_MA0143.3	14	0	+	0	0	.
chr4	7527350	7527351	chr4:7527351:C:T	rs62280208	C	T	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr4	7527639	7527640	chr4:7527640:T:C	rs4429728	T	C	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr4	7540101	7540102	chr4:7540102:G:C	rs13151992	G	C	c	Sox2_MA0143.3	5	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr4	7584937	7584938	chr4:7584938:A:G	rs73214689	A	G	A	Sox2_MA0143.3	8	0	-	0	0	.
chr4	7590340	7590341	chr4:7590341:T:G	rs4594727	T	G	T	Sox2_MA0143.3	-17	0	+	0	0	.
chr4	7590375	7590376	chr4:7590376:T:C	rs115586117	T	C	T	Sox2_MA0143.3	18	0	+	0	0	.
chr4	7696340	7696341	chr4:7696341:C:G	rs62290732	C	G	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr4	7760628	7760629	chr4:7760629:G:A	rs4689163	G	A	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr4	7764497	7764498	chr4:7764498:G:A	rs12639946	G	A	G	Sox2_MA0143.3	0	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr4	7769332	7769333	chr4:7769333:G:A	rs4997103	G	A	G	Sox2_MA0143.3	-14	0	+	0	0	.
chr4	7828106	7828107	chr4:7828107:T:C	chr4:7828107:T:C	T	C	T	Sox2_MA0143.3	2	1	-	9.019595766176417	2.900948058900136	CCATTGTC
chr4	7828666	7828667	chr4:7828667:T:C	rs116205067	T	C	T	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr4	7851432	7851433	chr4:7851433:G:A	rs4619890	G	A	G	Sox2_MA0143.3	7	1	-	9.019595766176417	9.613475778572903	CCATTGTC
chr4	7858174	7858175	chr4:7858175:G:A	rs28377405	G	A	G	Sox2_MA0143.3	0	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr4	7861496	7861497	chr4:7861497:T:A	rs28533862	T	A	T	Sox2_MA0143.3	16	0	+	0	0	.
chr4	7864169	7864170	chr4:7864170:G:A	rs116300129	G	A	G	Sox2_MA0143.3	-3	0	+	0	0	.
chr4	7899727	7899728	chr4:7899728:C:T	rs4075363	C	T	T	Sox2_MA0143.3	19	0	-	0	0	.
chr4	7902383	7902384	chr4:7902384:T:G	rs1320074	T	G	T	Sox2_MA0143.3	25	0	-	0	0	.
chr4	7916200	7916201	chr4:7916201:G:C	rs17770936	G	C	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr4	7924304	7924305	chr4:7924305:C:T	rs59390779	C	T	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr4	7939729	7939730	chr4:7939730:C:T	rs972647255	C	T	C	Sox2_MA0143.3	25	0	-	0	0	.
chr4	7959062	7959063	chr4:7959063:G:T	rs4696856	G	T	G	Sox2_MA0143.3	20	0	+	0	0	.
chr4	8010937	8010938	chr4:8010938:A:G	rs6837516	A	G	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr4	8060354	8060355	chr4:8060355:T:G	rs4696668	T	G	g	Sox2_MA0143.3	16	0	+	0	0	.
chr4	8072634	8072635	chr4:8072635:G:T	rs7660009	G	T	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr4	8106670	8106671	chr4:8106671:G:A	rs41266523	G	A	G	Sox2_MA0143.3	21	0	-	0	0	.
chr4	8155766	8155767	chr4:8155767:A:G	rs34054806	A	G	-	Sox2_MA0143.3	-10	0	-	0	0	.
chr4	8172324	8172325	chr4:8172325:G:A	rs75255234	G	A	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr4	8194864	8194865	chr4:8194865:T:C	rs16841879	T	C	T	Sox2_MA0143.3	-15	0	+	0	0	.
chr4	8210796	8210797	chr4:8210797:T:C	rs13152394	T	C	T	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr4	8226302	8226303	chr4:8226303:T:C	rs75929447	T	C	T	Sox2_MA0143.3	6	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr4	8226706	8226707	chr4:8226707:A:G	rs3796758	A	G	G	Sox2_MA0143.3	7	1	-	9.800647049772198	9.206767037375712	CCTTTGTT
chr4	8263454	8263455	chr4:8263455:T:C	rs57240686	T	C	C	Sox2_MA0143.3	4	1	+	8.864090315184848	1.9553355358696274	CCTTTGTG
chr4	8296244	8296245	chr4:8296245:C:T	rs186537945	C	T	C	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr4	8361357	8361358	chr4:8361358:G:A	rs56400914	G	A	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr4	8362327	8362328	chr4:8362328:G:A	rs1678274	G	A	G	Sox2_MA0143.3	10	0	+	0	0	.
chr4	8365414	8365415	chr4:8365415:G:T	rs2280570	G	T	G	Sox2_MA0143.3	26	0	-	0	0	.
chr4	8375330	8375331	chr4:8375331:A:G	rs11735859	A	G	A	Sox2_MA0143.3	6	1	-	8.676919043985553	1.7681642646703326	CCATTGTG
chr4	8399231	8399232	chr4:8399232:A:G	rs11938364	A	G	A	Sox2_MA0143.3	11	0	+	0	0	.
chr4	8425834	8425835	chr4:8425835:C:T	rs62286056	C	T	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr4	8448818	8448819	chr4:8448819:T:C	rs2688235	T	C	C	Sox2_MA0143.3	16	0	+	0	0	.
chr4	8469125	8469126	chr4:8469126:G:A	rs114543619	G	A	G	Sox2_MA0143.3	-14	0	+	0	0	.
chr4	8477840	8477841	chr4:8477841:C:A	rs148274675	C	A	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr4	8536321	8536322	chr4:8536322:A:C	rs883607	A	C	A	Sox2_MA0143.3	-10	0	-	0	0	.
chr4	8558391	8558392	chr4:8558392:G:C	rs2004768	G	C	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr4	8561751	8561752	chr4:8561752:T:C	rs61565535	T	C	T	Sox2_MA0143.3	18	0	+	0	0	.
chr4	8585295	8585296	chr4:8585296:T:G	rs7665624	T	G	G	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr4	8611298	8611299	chr4:8611299:G:A	rs3796727	G	A	A	Sox2_MA0143.3	12	0	-	0	0	.
chr4	8732089	8732090	chr4:8732090:G:A	rs143673385	G	A	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr4	8740900	8740901	chr4:8740901:G:C	rs184250859	G	C	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr4	8758369	8758370	chr4:8758370:A:G	rs147102792	A	G	-	Sox2_MA0143.3	23	0	-	0	0	.
chr4	8758375	8758376	chr4:8758376:T:C	rs138485046	T	C	-	Sox2_MA0143.3	17	0	-	0	0	.
chr4	8778034	8778035	chr4:8778035:G:A	rs151281585	G	A	G	Sox2_MA0143.3	-14	0	+	0	0	.
chr4	8820539	8820540	chr4:8820540:G:A	rs147439957	G	A	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr4	8834489	8834490	chr4:8834490:C:T	rs142970254	C	T	.	Sox2_MA0143.3	27	0	+	0	0	.
chr4	8843241	8843242	chr4:8843242:A:G	rs147535021	A	G	A	Sox2_MA0143.3	-14	0	-	0	0	.
chr4	8849960	8849961	chr4:8849961:T:C	rs28719825	T	C	T	Sox2_MA0143.3	-16	0	-	0	0	.
chr4	8878127	8878128	chr4:8878128:C:G	rs184702698	C	G	c	Sox2_MA0143.3	-13	0	+	0	0	.
chr4	8918180	8918181	chr4:8918181:A:G	rs567475585	A	G	a	Sox2_MA0143.3	-16	0	-	0	0	.
chr4	9016977	9016978	chr4:9016978:T:C	rs141735433	T	C	c	Sox2_MA0143.3	25	0	+	0	0	.
chr4	9568550	9568551	chr4:9568551:C:G	rs558187802	C	G	c	Sox2_MA0143.3	-17	0	+	0	0	.
chr4	9595731	9595732	chr4:9595732:A:G	rs10019130	A	G	a	Sox2_MA0143.3	-17	0	-	0	0	.
chr4	9605095	9605096	chr4:9605096:T:C	rs114344194	T	C	t	Sox2_MA0143.3	18	0	+	0	0	.
chr4	9705140	9705141	chr4:9705141:C:A	rs575415760	C	A	-	Sox2_MA0143.3	-12	0	-	0	0	.
chr4	9871170	9871171	chr4:9871171:T:C	rs56351177	T	C	c	Sox2_MA0143.3	-3	0	+	0	0	.
chr4	9889406	9889407	chr4:9889407:C:T	rs938562	C	T	C	Sox2_MA0143.3	26	0	-	0	0	.
chr4	9995227	9995228	chr4:9995228:G:T	rs16891926	G	T	G	Sox2_MA0143.3	7	1	-	9.019595766176417	3.3675628303222993	CCATTGTC
chr4	10008183	10008184	chr4:10008184:T:G	rs78441715	T	G	T	Sox2_MA0143.3	13	0	-	0	0	.
chr4	10022314	10022315	chr4:10022315:C:G	rs7663044	C	G	G	Sox2_MA0143.3	21	0	-	0	0	.
chr4	10029169	10029170	chr4:10029170:G:C	rs6826764	G	C	C	Sox2_MA0143.3	9	0	+	0	0	.
chr4	10041061	10041062	chr4:10041062:G:A	rs75245044	G	A	G	Sox2_MA0143.3	21	0	+	0	0	.
chr4	10070596	10070597	chr4:10070597:G:T	rs73212824	G	T	G	Sox2_MA0143.3	0	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr4	10089305	10089306	chr4:10089306:C:A	rs3775932	C	A	A	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr4	10089306	10089307	chr4:10089307:C:T	rs3775931	C	T	C	Sox2_MA0143.3	1	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr4	10121453	10121454	chr4:10121454:C:A	rs4235355	C	A	c	Sox2_MA0143.3	19	0	-	0	0	.
chr4	10121481	10121482	chr4:10121482:G:C	rs4235356	G	C	g	Sox2_MA0143.3	-9	0	-	0	0	.
chr4	10121956	10121957	chr4:10121957:C:T	rs56178126	C	T	c	Sox2_MA0143.3	-17	0	+	0	0	.
chr4	10157837	10157838	chr4:10157838:A:G	rs112359089	A	G	a	Sox2_MA0143.3	-5	0	+	0	0	.
chr4	10157838	10157839	chr4:10157839:A:G	chr4:10157839:A:G	A	G	a	Sox2_MA0143.3	-4	0	+	0	0	.
chr4	10157844	10157845	chr4:10157845:A:G	rs190914295	A	G	a	Sox2_MA0143.3	2	1	+	9.613475778572903	3.494828071296623	CCATTGTT
chr4	10157866	10157867	chr4:10157867:T:A	rs75044083	T	A	t	Sox2_MA0143.3	24	0	+	0	0	.
chr4	10167374	10167375	chr4:10167375:C:G	rs1001217	C	G	c	Sox2_MA0143.3	0	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr4	10184152	10184153	chr4:10184153:T:A	rs73220606	T	A	t	Sox2_MA0143.3	22	0	-	0	0	.
chr4	10184174	10184175	chr4:10184175:G:A	rs10025980	G	A	g	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr4	10195600	10195601	chr4:10195601:C:T	rs917823	C	T	c	Sox2_MA0143.3	-14	0	+	0	0	.
chr4	10197003	10197004	chr4:10197004:C:T	rs4697968	C	T	c	Sox2_MA0143.3	-2	0	-	0	0	.
chr4	10260960	10260961	chr4:10260961:G:A	rs79298064	G	A	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr4	10297002	10297003	chr4:10297003:C:T	rs139752864	C	T	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr4	10299189	10299190	chr4:10299190:A:G	rs6834574	A	G	a	Sox2_MA0143.3	23	0	-	0	0	.
chr4	10299194	10299195	chr4:10299195:G:T	rs10939829	G	T	T	Sox2_MA0143.3	18	0	-	0	0	.
chr4	10385934	10385935	chr4:10385935:C:A	rs10020891	C	A	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr4	10499345	10499346	chr4:10499346:A:G	rs7655289	A	G	A	Sox2_MA0143.3	-18	0	+	0	0	.
chr4	10691745	10691746	chr4:10691746:A:G	rs4626194	A	G	G	Sox2_MA0143.3	6	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr4	10706232	10706233	chr4:10706233:C:G	rs142358733	C	G	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr4	10720979	10720980	chr4:10720980:C:A	rs4269168	C	A	C	Sox2_MA0143.3	13	0	-	0	0	.
chr4	10724593	10724594	chr4:10724594:A:G	rs7679089	A	G	A	Sox2_MA0143.3	-14	0	-	0	0	.
chr4	10743306	10743307	chr4:10743307:C:T	rs12640839	C	T	C	Sox2_MA0143.3	15	0	+	0	0	.
chr4	10832630	10832631	chr4:10832631:C:T	rs1872090	C	T	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr4	10833540	10833541	chr4:10833541:G:T	rs2869756	G	T	G	Sox2_MA0143.3	1	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr4	10982821	10982822	chr4:10982822:C:A	rs17282915	C	A	A	Sox2_MA0143.3	-16	0	+	0	0	.
chr4	10998532	10998533	chr4:10998533:A:G	rs4697827	A	G	a	Sox2_MA0143.3	6	1	-	8.676919043985553	1.7681642646703326	CCATTGTG
chr4	11013855	11013856	chr4:11013856:G:A	rs11735952	G	A	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr4	11074217	11074218	chr4:11074218:T:C	rs6448476	T	C	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr4	11097878	11097879	chr4:11097879:C:G	rs6448493	C	G	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr4	11149878	11149879	chr4:11149879:T:G	rs140501599	T	G	T	Sox2_MA0143.3	2	1	+	8.864090315184848	2.5582713367092715	CCTTTGTG
chr4	11328652	11328653	chr4:11328653:G:A	rs1950007	G	A	A	Sox2_MA0143.3	-17	0	-	0	0	.
chr4	11417016	11417017	chr4:11417017:G:C	rs224490	G	C	G	Sox2_MA0143.3	1	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr4	11426207	11426208	chr4:11426208:T:C	rs57654402	T	C	T	Sox2_MA0143.3	-4	0	+	0	0	.
chr4	11426216	11426217	chr4:11426217:G:T	rs10010953	G	T	G	Sox2_MA0143.3	5	1	+	8.676919043985553	1.7681642646703324	CCATTGTG
chr4	11457052	11457053	chr4:11457053:A:G	rs7681310	A	G	A	Sox2_MA0143.3	-19	0	-	0	0	.
chr4	11525646	11525647	chr4:11525647:C:T	rs62297913	C	T	C	Sox2_MA0143.3	8	0	+	0	0	.
chr4	11535756	11535757	chr4:11535757:C:T	rs1495162	C	T	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr4	11583383	11583384	chr4:11583384:G:C	rs1025801696	G	C	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr4	11593936	11593937	chr4:11593937:A:G	rs34779737	A	G	A	Sox2_MA0143.3	2	1	-	9.206767037375712	2.900948058900136	CCTTTGTC
chr4	11623219	11623220	chr4:11623220:T:C	rs6448798	T	C	T	Sox2_MA0143.3	-8	0	+	0	0	.
chr4	11631943	11631944	chr4:11631944:T:C	rs7663826	T	C	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr4	11631957	11631958	chr4:11631958:A:G	rs6448800	A	G	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr4	11675278	11675279	chr4:11675279:A:G	rs12649050	A	G	A	Sox2_MA0143.3	-8	0	+	0	0	.
chr4	11701376	11701377	chr4:11701377:T:C	rs3971325	T	C	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr4	11889258	11889259	chr4:11889259:C:T	rs12640691	C	T	C	Sox2_MA0143.3	19	0	-	0	0	.
chr4	11889268	11889269	chr4:11889269:C:G	rs10939378	C	G	G	Sox2_MA0143.3	9	0	-	0	0	.
chr4	12434687	12434688	chr4:12434688:C:G	rs4569774	C	G	G	Sox2_MA0143.3	15	0	-	0	0	.
chr4	12459658	12459659	chr4:12459659:C:T	rs28448339	C	T	c	Sox2_MA0143.3	-19	0	+	0	0	.
chr4	12469476	12469477	chr4:12469477:G:A	rs75143871	G	A	G	Sox2_MA0143.3	15	0	+	0	0	.
chr4	12579009	12579010	chr4:12579010:A:G	rs16887280	A	G	A	Sox2_MA0143.3	-17	0	+	0	0	.
chr4	12796942	12796943	chr4:12796943:C:T	rs79172069	C	T	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr4	12797703	12797704	chr4:12797704:A:G	rs77650006	A	G	A	Sox2_MA0143.3	-3	0	+	0	0	.
chr4	12861465	12861466	chr4:12861466:T:A	rs2711560	T	A	T	Sox2_MA0143.3	-13	0	-	0	0	.
chr4	12928567	12928568	chr4:12928568:C:T	rs223963	C	T	C	Sox2_MA0143.3	17	0	-	0	0	.
chr4	12994154	12994155	chr4:12994155:C:T	rs58877637	C	T	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr4	13029197	13029198	chr4:13029198:C:T	rs10004129	C	T	C	Sox2_MA0143.3	0	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr4	13034515	13034516	chr4:13034516:A:G	rs1513952	A	G	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr4	13203181	13203182	chr4:13203182:G:A	rs73227609	G	A	G	Sox2_MA0143.3	15	0	-	0	0	.
chr4	13349219	13349220	chr4:13349220:A:G	rs73227700	A	G	A	Sox2_MA0143.3	23	0	-	0	0	.
chr4	13633848	13633849	chr4:13633849:G:A	rs35260613	G	A	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr4	13705672	13705673	chr4:13705673:A:G	rs16888983	A	G	A	Sox2_MA0143.3	12	0	+	0	0	.
chr4	13750735	13750736	chr4:13750736:C:A	rs11727552	C	A	C	Sox2_MA0143.3	-20	0	-	0	0	.
chr4	13761645	13761646	chr4:13761646:G:A	rs77834397	G	A	-	Sox2_MA0143.3	-3	0	-	0	0	.
chr4	13815341	13815342	chr4:13815342:T:A	rs76957496	T	A	T	Sox2_MA0143.3	-18	0	-	0	0	.
chr4	13856396	13856397	chr4:13856397:G:A	rs368711057	G	A	G	Sox2_MA0143.3	20	0	-	0	0	.
chr4	13866990	13866991	chr4:13866991:G:A	rs114579885	G	A	G	Sox2_MA0143.3	18	0	-	0	0	.
chr4	13888484	13888485	chr4:13888485:G:A	rs1858288	G	A	G	Sox2_MA0143.3	7	1	+	8.676919043985553	3.3675628303222993	CCATTGTG
chr4	13969045	13969046	chr4:13969046:T:C	rs78496581	T	C	T	Sox2_MA0143.3	25	0	+	0	0	.
chr4	14097310	14097311	chr4:14097311:T:C	rs12499108	T	C	T	Sox2_MA0143.3	-3	0	-	0	0	.
chr4	14249334	14249335	chr4:14249335:A:G	rs10470841	A	G	A	Sox2_MA0143.3	3	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr4	14340299	14340300	chr4:14340300:C:T	rs28399675	C	T	C	Sox2_MA0143.3	27	0	-	0	0	.
chr4	14452056	14452057	chr4:14452057:A:G	rs146098340	A	G	A	Sox2_MA0143.3	21	0	-	0	0	.
chr4	14669587	14669588	chr4:14669588:G:C	chr4:14669588:G:C	G	C	G	Sox2_MA0143.3	5	1	+	9.206767037375712	2.298012258060492	CCTTTGTC
chr4	14811310	14811311	chr4:14811311:C:T	rs4698295	C	T	C	Sox2_MA0143.3	10	0	-	0	0	.
chr4	14835466	14835467	chr4:14835467:T:C	rs67608178	T	C	T	Sox2_MA0143.3	15	0	-	0	0	.
chr4	14835486	14835487	chr4:14835487:G:A	rs73239319	G	A	A	Sox2_MA0143.3	-5	0	-	0	0	.
chr4	14835498	14835499	chr4:14835499:C:G	rs73239321	C	G	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr4	14840107	14840108	chr4:14840108:C:G	rs137942910	C	G	C	Sox2_MA0143.3	18	0	-	0	0	.
chr4	14850507	14850508	chr4:14850508:A:G	rs10029128	A	G	A	Sox2_MA0143.3	9	0	-	0	0	.
chr4	14861248	14861249	chr4:14861249:T:C	rs16891108	T	C	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr4	14863757	14863758	chr4:14863758:T:A	rs147547266	T	A	T	Sox2_MA0143.3	3	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr4	14863771	14863772	chr4:14863772:A:T	rs114008651	A	T	A	Sox2_MA0143.3	17	0	+	0	0	.
chr4	14893935	14893936	chr4:14893936:A:C	chr4:14893936:A:C	A	C	A	Sox2_MA0143.3	12	0	+	0	0	.
chr4	14895148	14895149	chr4:14895149:C:T	rs73113959	C	T	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr4	14910521	14910522	chr4:14910522:G:A	rs10212705	G	A	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr4	14917002	14917003	chr4:14917003:A:G	rs1994945	A	G	A	Sox2_MA0143.3	3	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr4	15146623	15146624	chr4:15146624:A:G	rs16891470	A	G	A	Sox2_MA0143.3	15	0	+	0	0	.
chr4	15199140	15199141	chr4:15199141:C:T	rs73228866	C	T	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr4	15261029	15261030	chr4:15261030:G:A	rs7690758	G	A	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr4	15327421	15327422	chr4:15327422:C:A	rs4440214	C	A	A	Sox2_MA0143.3	-5	0	+	0	0	.
chr4	15328371	15328372	chr4:15328372:T:C	rs4698362	T	C	C	Sox2_MA0143.3	-5	0	-	0	0	.
chr4	15411432	15411433	chr4:15411433:A:G	rs7681816	A	G	A	Sox2_MA0143.3	-8	0	+	0	0	.
chr4	15420989	15420990	chr4:15420990:A:C	rs985264891	A	C	A	Sox2_MA0143.3	-19	0	+	0	0	.
chr4	15428946	15428947	chr4:15428947:T:C	rs13149679	T	C	T	Sox2_MA0143.3	19	0	+	0	0	.
chr4	15652462	15652463	chr4:15652463:C:G	rs13106528	C	G	C	Sox2_MA0143.3	5	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr4	15654168	15654169	chr4:15654169:G:C	rs73241195	G	C	G	Sox2_MA0143.3	1	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr4	15654171	15654172	chr4:15654172:T:C	rs73241197	T	C	T	Sox2_MA0143.3	-2	0	-	0	0	.
chr4	15717815	15717816	chr4:15717816:G:A	rs73121382	G	A	G	Sox2_MA0143.3	14	0	-	0	0	.
chr4	15754302	15754303	chr4:15754303:G:A	rs114724146	G	A	.	Sox2_MA0143.3	-14	0	+	0	0	.
chr4	15774282	15774283	chr4:15774283:A:G	rs10939634	A	G	G	Sox2_MA0143.3	2	1	+	8.676919043985553	2.5582713367092715	CCATTGTG
chr4	15976621	15976622	chr4:15976622:A:G	rs11944619	A	G	A	Sox2_MA0143.3	20	0	-	0	0	.
chr4	15980856	15980857	chr4:15980857:C:T	rs12649852	C	T	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr4	15983429	15983430	chr4:15983430:C:T	rs10488967	C	T	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr4	16034372	16034373	chr4:16034373:C:T	rs6816182	C	T	T	Sox2_MA0143.3	27	0	-	0	0	.
chr4	16109056	16109057	chr4:16109057:C:T	rs6833070	C	T	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr4	16116876	16116877	chr4:16116877:G:A	rs59199268	G	A	G	Sox2_MA0143.3	10	0	+	0	0	.
chr4	16141060	16141061	chr4:16141061:A:C	rs144168538	A	C	A	Sox2_MA0143.3	-3	0	-	0	0	.
chr4	16149453	16149454	chr4:16149454:T:A	rs62290917	T	A	T	Sox2_MA0143.3	-11	0	+	0	0	.
chr4	16158244	16158245	chr4:16158245:G:A	rs184325475	G	A	.	Sox2_MA0143.3	21	0	+	0	0	.
chr4	16416815	16416816	chr4:16416816:A:G	rs2872340	A	G	A	Sox2_MA0143.3	-13	0	+	0	0	.
chr4	16416837	16416838	chr4:16416838:T:C	rs2036358	T	C	T	Sox2_MA0143.3	9	0	+	0	0	.
chr4	16439789	16439790	chr4:16439790:C:T	rs1501134	C	T	C	Sox2_MA0143.3	0	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr4	16591326	16591327	chr4:16591327:G:T	rs145991521	G	T	G	Sox2_MA0143.3	5	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr4	16597977	16597978	chr4:16597978:T:G	chr4:16597978:T:G	T	G	T	Sox2_MA0143.3	-19	0	+	0	0	.
chr4	16626970	16626971	chr4:16626971:G:A	rs143981887	G	A	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr4	16691582	16691583	chr4:16691583:G:A	rs16893788	G	A	G	Sox2_MA0143.3	10	0	+	0	0	.
chr4	16812196	16812197	chr4:16812197:C:T	rs207690	C	T	T	Sox2_MA0143.3	15	0	+	0	0	.
chr4	16991893	16991894	chr4:16991894:A:G	rs1476934167	A	G	A	Sox2_MA0143.3	-3	0	-	0	0	.
chr4	17063919	17063920	chr4:17063920:C:T	rs7677775	C	T	C	Sox2_MA0143.3	1	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr4	17156803	17156804	chr4:17156804:A:G	rs656010	A	G	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr4	17238922	17238923	chr4:17238923:C:T	rs10015987	C	T	T	Sox2_MA0143.3	-5	0	-	0	0	.
chr4	17321955	17321956	chr4:17321956:G:A	rs370947235	G	A	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr4	17324181	17324182	chr4:17324182:C:T	rs16894867	C	T	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr4	17332806	17332807	chr4:17332807:A:T	rs80269517	A	T	A	Sox2_MA0143.3	23	0	+	0	0	.
chr4	17450561	17450562	chr4:17450562:C:T	rs1376186	C	T	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr4	17510186	17510187	chr4:17510187:C:T	rs10011038	C	T	C	Sox2_MA0143.3	9	0	-	0	0	.
chr4	17575866	17575867	chr4:17575867:T:C	rs2098151	T	C	T	Sox2_MA0143.3	12	0	+	0	0	.
chr4	18110326	18110327	chr4:18110327:G:A	rs993434	G	A	A	Sox2_MA0143.3	-20	0	-	0	0	.
chr4	18140318	18140319	chr4:18140319:C:A	rs188220161	C	A	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr4	18158962	18158963	chr4:18158963:C:A	rs2134708	C	A	C	Sox2_MA0143.3	-5	0	-	0	0	.
chr4	18241908	18241909	chr4:18241909:C:G	rs16896754	C	G	C	Sox2_MA0143.3	1	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr4	18297038	18297039	chr4:18297039:A:G	rs16896899	A	G	A	Sox2_MA0143.3	24	0	+	0	0	.
chr4	18401620	18401621	chr4:18401621:C:T	rs116608572	C	T	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr4	18452834	18452835	chr4:18452835:C:T	rs11735817	C	T	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr4	18538722	18538723	chr4:18538723:T:G	rs2219744	T	G	g	Sox2_MA0143.3	14	0	+	0	0	.
chr4	18583245	18583246	chr4:18583246:G:A	rs895000086	G	A	g	Sox2_MA0143.3	-14	0	-	0	0	.
chr4	18583250	18583251	chr4:18583251:T:C	rs73098360	T	C	c	Sox2_MA0143.3	-19	0	-	0	0	.
chr4	18611128	18611129	chr4:18611129:G:A	rs75300113	G	A	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr4	18932300	18932301	chr4:18932301:A:G	rs142213752	A	G	A	Sox2_MA0143.3	20	0	+	0	0	.
chr4	18935693	18935694	chr4:18935694:A:G	rs207284	A	G	G	Sox2_MA0143.3	17	0	-	0	0	.
chr4	18935727	18935728	chr4:18935728:G:T	rs11728202	G	T	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr4	19090365	19090366	chr4:19090366:C:T	rs79547202	C	T	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr4	19219070	19219071	chr4:19219071:G:A	rs28704977	G	A	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr4	19429805	19429806	chr4:19429806:A:C	rs28468581	A	C	A	Sox2_MA0143.3	4	1	-	3.5547341015215945	-3.3540206777936254	CCTTTGTA
chr4	19689634	19689635	chr4:19689635:C:A	rs142599148	C	A	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr4	19879886	19879887	chr4:19879887:T:A	rs7696412	T	A	T	Sox2_MA0143.3	6	1	+	9.206767037375712	2.298012258060492	CCTTTGTC
chr4	19929404	19929405	chr4:19929405:G:A	rs6810450	G	A	G	Sox2_MA0143.3	19	0	+	0	0	.
chr4	20005371	20005372	chr4:20005372:G:A	rs2708981	G	A	g	Sox2_MA0143.3	-15	0	-	0	0	.
chr4	20091167	20091168	chr4:20091168:T:G	rs1485565	T	G	T	Sox2_MA0143.3	9	0	+	0	0	.
chr4	20419056	20419057	chr4:20419057:C:T	rs565727763	C	T	C	Sox2_MA0143.3	0	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr4	20478538	20478539	chr4:20478539:C:G	rs16869646	C	G	C	Sox2_MA0143.3	0	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr4	20529357	20529358	chr4:20529358:G:A	rs2168801	G	A	G	Sox2_MA0143.3	0	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr4	20700262	20700263	chr4:20700263:C:T	rs183036886	C	T	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr4	20724452	20724453	chr4:20724453:T:C	rs7673805	T	C	c	Sox2_MA0143.3	8	0	+	0	0	.
chr4	20984693	20984694	chr4:20984694:T:G	chr4:20984694:T:G	T	G	T	Sox2_MA0143.3	18	0	-	0	0	.
chr4	21102777	21102778	chr4:21102778:A:G	rs1368643	A	G	G	Sox2_MA0143.3	13	0	+	0	0	.
chr4	21135750	21135751	chr4:21135751:C:T	rs28684660	C	T	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr4	21136257	21136258	chr4:21136258:T:C	rs1433485	T	C	T	Sox2_MA0143.3	-17	0	-	0	0	.
chr4	21206079	21206080	chr4:21206080:A:G	rs143807565	A	G	A	Sox2_MA0143.3	-18	0	+	0	0	.
chr4	21517087	21517088	chr4:21517088:T:C	rs6833065	T	C	T	Sox2_MA0143.3	12	0	-	0	0	.
chr4	21649996	21649997	chr4:21649997:C:T	rs1503990	C	T	T	Sox2_MA0143.3	-7	0	+	0	0	.
chr4	21725414	21725415	chr4:21725415:T:C	rs4101631	T	C	C	Sox2_MA0143.3	11	0	-	0	0	.
chr4	21779993	21779994	chr4:21779994:A:G	rs6448078	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr4	21789404	21789405	chr4:21789405:T:G	chr4:21789405:T:G	T	G	t	Sox2_MA0143.3	-14	0	-	0	0	.
chr4	21870103	21870104	chr4:21870104:T:G	rs12054593	T	G	T	Sox2_MA0143.3	18	0	+	0	0	.
chr4	21915882	21915883	chr4:21915883:C:T	rs550205275	C	T	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr4	22338748	22338749	chr4:22338749:T:G	rs1827238	T	G	T	Sox2_MA0143.3	-10	0	+	0	0	.
chr4	22438290	22438291	chr4:22438291:A:C	rs6823735	A	C	A	Sox2_MA0143.3	26	0	+	0	0	.
chr4	22487654	22487655	chr4:22487655:T:C	rs192812879	T	C	T	Sox2_MA0143.3	3	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr4	22503181	22503182	chr4:22503182:C:T	rs7664547	C	T	C	Sox2_MA0143.3	23	0	-	0	0	.
chr4	22515446	22515447	chr4:22515447:G:A	rs77908511	G	A	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr4	22515937	22515938	chr4:22515938:T:C	rs553786241	T	C	-	Sox2_MA0143.3	3	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr4	22693415	22693416	chr4:22693416:C:T	rs1485832	C	T	C	Sox2_MA0143.3	5	1	-	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr4	22693732	22693733	chr4:22693733:G:A	rs4146270	G	A	G	Sox2_MA0143.3	27	0	-	0	0	.
chr4	22876505	22876506	chr4:22876506:A:C	rs16873186	A	C	A	Sox2_MA0143.3	-13	0	+	0	0	.
chr4	22934088	22934089	chr4:22934089:T:C	rs10805237	T	C	C	Sox2_MA0143.3	16	0	-	0	0	.
chr4	23158464	23158465	chr4:23158465:A:C	rs114870207	A	C	A	Sox2_MA0143.3	-10	0	+	0	0	.
chr4	23158506	23158507	chr4:23158507:C:T	rs1486377948	C	T	C	Sox2_MA0143.3	0	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr4	23161660	23161661	chr4:23161661:C:T	rs73099086	C	T	c	Sox2_MA0143.3	20	0	+	0	0	.
chr4	23162518	23162519	chr4:23162519:A:G	rs77992856	A	G	A	Sox2_MA0143.3	25	0	-	0	0	.
chr4	23290799	23290800	chr4:23290800:T:C	rs4519787	T	C	T	Sox2_MA0143.3	9	0	+	0	0	.
chr4	23334110	23334111	chr4:23334111:G:A	rs751654403	G	A	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr4	23334117	23334118	chr4:23334118:T:C	rs542335640	T	C	T	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr4	23365153	23365154	chr4:23365154:C:A	rs7672988	C	A	C	Sox2_MA0143.3	27	0	-	0	0	.
chr4	23377810	23377811	chr4:23377811:G:A	rs12501080	G	A	G	Sox2_MA0143.3	-3	0	-	0	0	.
chr4	23540309	23540310	chr4:23540310:A:G	rs1511445	A	G	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr4	23879430	23879431	chr4:23879431:G:A	rs61076774	G	A	A	Sox2_MA0143.3	21	0	+	0	0	.
chr4	23891942	23891943	chr4:23891943:G:A	rs56869809	G	A	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr4	23891955	23891956	chr4:23891956:G:C	rs2946386	G	C	C	Sox2_MA0143.3	-20	0	-	0	0	.
chr4	23930499	23930500	chr4:23930500:A:G	rs16874367	A	G	G	Sox2_MA0143.3	6	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr4	24056389	24056390	chr4:24056390:G:T	rs2324152	G	T	G	Sox2_MA0143.3	8	0	+	0	0	.
chr4	24140988	24140989	chr4:24140989:G:A	rs1705089	G	A	A	Sox2_MA0143.3	18	0	-	0	0	.
chr4	24469223	24469224	chr4:24469224:C:T	rs3828483	C	T	C	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr4	24486142	24486143	chr4:24486143:T:C	rs3857111	T	C	C	Sox2_MA0143.3	13	0	-	0	0	.
chr4	24489946	24489947	chr4:24489947:T:C	rs56246965	T	C	T	Sox2_MA0143.3	2	1	-	8.676919043985553	2.5582713367092715	CCATTGTG
chr4	24747773	24747774	chr4:24747774:A:C	rs16876011	A	C	A	Sox2_MA0143.3	-17	0	+	0	0	.
chr4	24800789	24800790	chr4:24800790:T:C	rs8192290	T	C	T	Sox2_MA0143.3	-19	0	+	0	0	.
chr4	24837941	24837942	chr4:24837942:T:G	rs17553672	T	G	T	Sox2_MA0143.3	2	1	-	9.613475778572903	3.494828071296623	CCATTGTT
chr4	24922698	24922699	chr4:24922699:C:T	rs73250629	C	T	C	Sox2_MA0143.3	5	1	-	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr4	25207301	25207302	chr4:25207302:T:C	rs62411597	T	C	T	Sox2_MA0143.3	4	1	+	9.206767037375712	2.2980122580604916	CCTTTGTC
chr4	25434811	25434812	chr4:25434812:A:G	rs78155996	A	G	A	Sox2_MA0143.3	16	0	-	0	0	.
chr4	25440571	25440572	chr4:25440572:T:C	rs189874785	T	C	T	Sox2_MA0143.3	3	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr4	25509793	25509794	chr4:25509794:G:T	rs9654103	G	T	G	Sox2_MA0143.3	21	0	+	0	0	.
chr4	25576586	25576587	chr4:25576587:G:A	rs79256271	G	A	G	Sox2_MA0143.3	-3	0	+	0	0	.
chr4	25576598	25576599	chr4:25576599:C:T	rs113377802	C	T	C	Sox2_MA0143.3	9	0	+	0	0	.
chr4	25592814	25592815	chr4:25592815:A:G	rs10939067	A	G	A	Sox2_MA0143.3	27	0	+	0	0	.
chr4	25613054	25613055	chr4:25613055:G:A	rs17671398	G	A	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr4	25648610	25648611	chr4:25648611:A:G	rs11724716	A	G	G	Sox2_MA0143.3	17	0	+	0	0	.
chr4	25652481	25652482	chr4:25652482:C:G	rs6857608	C	G	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr4	25706053	25706054	chr4:25706054:C:A	rs13106559	C	A	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr4	25789132	25789133	chr4:25789133:A:G	rs10016308	A	G	A	Sox2_MA0143.3	-19	0	+	0	0	.
chr4	25891321	25891322	chr4:25891322:A:G	rs6829432	A	G	G	Sox2_MA0143.3	17	0	+	0	0	.
chr4	25907296	25907297	chr4:25907297:A:G	rs6818008	A	G	G	Sox2_MA0143.3	-16	0	-	0	0	.
chr4	25908848	25908849	chr4:25908849:T:C	rs61065748	T	C	T	Sox2_MA0143.3	3	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr4	25908868	25908869	chr4:25908869:G:A	rs140008316	G	A	G	Sox2_MA0143.3	23	0	+	0	0	.
chr4	25913674	25913675	chr4:25913675:C:A	rs36124354	C	A	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr4	25913695	25913696	chr4:25913696:T:C	rs548515831	T	C	T	Sox2_MA0143.3	4	1	+	9.206767037375712	2.2980122580604916	CCTTTGTC
chr4	25913718	25913719	chr4:25913719:C:G	rs1037818895	C	G	C	Sox2_MA0143.3	27	0	+	0	0	.
chr4	25957432	25957433	chr4:25957433:T:C	rs117681744	T	C	T	Sox2_MA0143.3	-1	0	+	0	0	.
chr4	25972273	25972274	chr4:25972274:A:G	rs7375697	A	G	G	Sox2_MA0143.3	7	1	-	9.613475778572903	9.019595766176417	CCATTGTT
chr4	25982442	25982443	chr4:25982443:T:G	rs11724348	T	G	G	Sox2_MA0143.3	6	1	+	9.206767037375712	2.298012258060492	CCTTTGTC
chr4	25984216	25984217	chr4:25984217:G:T	rs140117748	G	T	G	Sox2_MA0143.3	18	0	-	0	0	.
chr4	25991614	25991615	chr4:25991615:G:T	rs6828206	G	T	T	Sox2_MA0143.3	22	0	+	0	0	.
chr4	26020956	26020957	chr4:26020957:T:C	rs17629173	T	C	T	Sox2_MA0143.3	-2	0	+	0	0	.
chr4	26080194	26080195	chr4:26080195:G:T	rs73243890	G	T	G	Sox2_MA0143.3	21	0	+	0	0	.
chr4	26150990	26150991	chr4:26150991:T:C	rs929104687	T	C	T	Sox2_MA0143.3	-17	0	-	0	0	.
chr4	26161688	26161689	chr4:26161689:G:C	rs7667399	G	C	G	Sox2_MA0143.3	1	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr4	26322295	26322296	chr4:26322296:G:C	rs2077777	G	C	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr4	26341211	26341212	chr4:26341212:G:T	rs73809416	G	T	g	Sox2_MA0143.3	-15	0	-	0	0	.
chr4	26525986	26525987	chr4:26525987:C:T	rs16878450	C	T	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr4	26692812	26692813	chr4:26692813:C:T	rs115998404	C	T	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr4	26765064	26765065	chr4:26765065:A:G	rs7689475	A	G	A	Sox2_MA0143.3	-12	0	-	0	0	.
chr4	26865088	26865089	chr4:26865089:T:C	rs4692129	T	C	C	Sox2_MA0143.3	23	0	+	0	0	.
chr4	27104448	27104449	chr4:27104449:T:C	rs78771812	T	C	T	Sox2_MA0143.3	24	0	+	0	0	.
chr4	27141732	27141733	chr4:27141733:G:A	rs17649491	G	A	G	Sox2_MA0143.3	19	0	+	0	0	.
chr4	27206600	27206601	chr4:27206601:C:G	rs4504235	C	G	C	Sox2_MA0143.3	1	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr4	27234232	27234233	chr4:27234233:C:T	rs13122794	C	T	C	Sox2_MA0143.3	15	0	+	0	0	.
chr4	27252865	27252866	chr4:27252866:T:C	rs715645	T	C	T	Sox2_MA0143.3	15	0	-	0	0	.
chr4	27370044	27370045	chr4:27370045:A:C	rs7661484	A	C	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr4	27534702	27534703	chr4:27534703:C:T	rs9790665	C	T	T	Sox2_MA0143.3	-18	0	-	0	0	.
chr4	27805801	27805802	chr4:27805802:C:T	rs17614847	C	T	C	Sox2_MA0143.3	5	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr4	27805805	27805806	chr4:27805806:G:C	rs115876872	G	C	G	Sox2_MA0143.3	1	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr4	27973892	27973893	chr4:27973893:A:G	rs4533761	A	G	A	Sox2_MA0143.3	-10	0	+	0	0	.
chr4	28013190	28013191	chr4:28013191:C:T	rs143049605	C	T	C	Sox2_MA0143.3	25	0	-	0	0	.
chr4	28036475	28036476	chr4:28036476:T:C	rs7692901	T	C	C	Sox2_MA0143.3	2	1	+	8.864090315184848	2.5582713367092715	CCTTTGTG
chr4	28233726	28233727	chr4:28233727:A:G	rs973585	A	G	G	Sox2_MA0143.3	17	0	+	0	0	.
chr4	28238025	28238026	chr4:28238026:A:C	rs10212872	A	C	C	Sox2_MA0143.3	16	0	+	0	0	.
chr4	28268112	28268113	chr4:28268113:A:G	rs35621260	A	G	A	Sox2_MA0143.3	14	0	-	0	0	.
chr4	28302610	28302611	chr4:28302611:A:G	rs112932335	A	G	A	Sox2_MA0143.3	6	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr4	28651178	28651179	chr4:28651179:C:T	rs2101697	C	T	T	Sox2_MA0143.3	-8	0	+	0	0	.
chr4	28788133	28788134	chr4:28788134:A:C	rs73123345	A	C	A	Sox2_MA0143.3	-1	0	+	0	0	.
chr4	28917568	28917569	chr4:28917569:G:A	rs13121478	G	A	A	Sox2_MA0143.3	-13	0	+	0	0	.
chr4	28926061	28926062	chr4:28926062:G:A	rs73222940	G	A	G	Sox2_MA0143.3	1	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr4	28979243	28979244	chr4:28979244:C:T	rs6856094	C	T	T	Sox2_MA0143.3	-2	0	+	0	0	.
chr4	29293978	29293979	chr4:29293979:C:T	rs13118165	C	T	T	Sox2_MA0143.3	-19	0	+	0	0	.
chr4	29304841	29304842	chr4:29304842:A:G	rs4519856	A	G	G	Sox2_MA0143.3	7	1	+	3.5547341015215945	8.864090315184848	CCTTTGTA
chr4	29316295	29316296	chr4:29316296:C:A	rs4604115	C	A	A	Sox2_MA0143.3	10	0	+	0	0	.
chr4	29321068	29321069	chr4:29321069:G:A	rs2310013	G	A	G	Sox2_MA0143.3	-12	0	+	0	0	.
chr4	29327176	29327177	chr4:29327177:A:T	rs74681546	A	T	A	Sox2_MA0143.3	-8	0	+	0	0	.
chr4	29757039	29757040	chr4:29757040:G:T	rs114062843	G	T	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr4	29885775	29885776	chr4:29885776:T:A	rs58180230	T	A	T	Sox2_MA0143.3	-18	0	-	0	0	.
chr4	30062471	30062472	chr4:30062472:A:G	rs6448687	A	G	A	Sox2_MA0143.3	17	0	-	0	0	.
chr4	30062483	30062484	chr4:30062484:C:T	rs6826986	C	T	T	Sox2_MA0143.3	5	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr4	30093505	30093506	chr4:30093506:G:C	rs57157744	G	C	g	Sox2_MA0143.3	-18	0	+	0	0	.
chr4	30093521	30093522	chr4:30093522:A:T	rs13139387	A	T	A	Sox2_MA0143.3	-2	0	+	0	0	.
chr4	30525832	30525833	chr4:30525833:C:A	rs73228259	C	A	T	Sox2_MA0143.3	-19	0	+	0	0	.
chr4	30929834	30929835	chr4:30929835:T:C	rs10013694	T	C	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr4	31337383	31337384	chr4:31337384:G:A	rs7684387	G	A	A	Sox2_MA0143.3	-15	0	+	0	0	.
chr4	31667835	31667836	chr4:31667836:T:C	rs73814120	T	C	T	Sox2_MA0143.3	3	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr4	32089091	32089092	chr4:32089092:T:C	rs11133174	T	C	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr4	32180151	32180152	chr4:32180152:T:C	rs7694937	T	C	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr4	32254436	32254437	chr4:32254437:A:G	rs148143128	A	G	a	Sox2_MA0143.3	-11	0	+	0	0	.
chr4	32272803	32272804	chr4:32272804:C:T	rs77189414	C	T	c	Sox2_MA0143.3	25	0	+	0	0	.
chr4	32565527	32565528	chr4:32565528:T:G	rs9312622	T	G	G	Sox2_MA0143.3	8	0	+	0	0	.
chr4	32572958	32572959	chr4:32572959:C:G	rs11722447	C	G	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr4	32572968	32572969	chr4:32572969:T:G	rs11725112	T	G	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr4	32771825	32771826	chr4:32771826:C:A	rs4130314	C	A	A	Sox2_MA0143.3	21	0	-	0	0	.
chr4	32775110	32775111	chr4:32775111:T:C	rs147630887	T	C	T	Sox2_MA0143.3	19	0	-	0	0	.
chr4	32863857	32863858	chr4:32863858:T:G	rs6831092	T	G	T	Sox2_MA0143.3	17	0	-	0	0	.
chr4	33030627	33030628	chr4:33030628:G:T	rs116729277	G	T	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr4	33300953	33300954	chr4:33300954:C:A	rs2585915	C	A	C	Sox2_MA0143.3	19	0	-	0	0	.
chr4	33364410	33364411	chr4:33364411:A:G	rs7672907	A	G	A	Sox2_MA0143.3	24	0	-	0	0	.
chr4	33850639	33850640	chr4:33850640:G:T	chr4:33850640:G:T	G	T	g	Sox2_MA0143.3	17	0	-	0	0	.
chr4	33942950	33942951	chr4:33942951:A:G	rs143914863	A	G	A	Sox2_MA0143.3	-12	0	-	0	0	.
chr4	34335477	34335478	chr4:34335478:A:C	rs186694254	A	C	A	Sox2_MA0143.3	6	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr4	34380841	34380842	chr4:34380842:A:G	rs185946484	A	G	A	Sox2_MA0143.3	-4	0	-	0	0	.
chr4	34656210	34656211	chr4:34656211:T:G	rs10517326	T	G	T	Sox2_MA0143.3	-16	0	+	0	0	.
chr4	34720301	34720302	chr4:34720302:T:A	rs4406040	T	A	T	Sox2_MA0143.3	-1	0	+	0	0	.
chr4	34790360	34790361	chr4:34790361:C:G	rs35857666	C	G	G	Sox2_MA0143.3	22	0	+	0	0	.
chr4	35217336	35217337	chr4:35217337:T:C	rs6531347	T	C	T	Sox2_MA0143.3	3	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr4	35408135	35408136	chr4:35408136:A:G	rs10017120	A	G	A	Sox2_MA0143.3	-4	0	+	0	0	.
chr4	35541325	35541326	chr4:35541326:T:A	rs74974022	T	A	A	Sox2_MA0143.3	23	0	+	0	0	.
chr4	35583336	35583337	chr4:35583337:G:A	rs16991234	G	A	A	Sox2_MA0143.3	13	0	+	0	0	.
chr4	36081351	36081352	chr4:36081352:G:C	rs76376942	G	C	G	Sox2_MA0143.3	24	0	-	0	0	.
chr4	36128770	36128771	chr4:36128771:C:T	rs1397419	C	T	T	Sox2_MA0143.3	26	0	+	0	0	.
chr4	36241916	36241917	chr4:36241917:C:T	chr4:36241917:C:T	C	T	C	Sox2_MA0143.3	15	0	+	0	0	.
chr4	36329178	36329179	chr4:36329179:G:A	rs16992080	G	A	T	Sox2_MA0143.3	17	0	+	0	0	.
chr4	36332534	36332535	chr4:36332535:C:T	rs16992086	C	T	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr4	36394467	36394468	chr4:36394468:T:G	rs10003626	T	G	G	Sox2_MA0143.3	25	0	+	0	0	.
chr4	37083151	37083152	chr4:37083152:T:C	rs9985626	T	C	T	Sox2_MA0143.3	18	0	-	0	0	.
chr4	37196506	37196507	chr4:37196507:A:C	rs1656213	A	C	A	Sox2_MA0143.3	22	0	+	0	0	.
chr4	37226092	37226093	chr4:37226093:C:T	rs17575597	C	T	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr4	37368381	37368382	chr4:37368382:C:A	rs28523611	C	A	A	Sox2_MA0143.3	0	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr4	37393168	37393169	chr4:37393169:T:G	rs78838350	T	G	T	Sox2_MA0143.3	-8	0	-	0	0	.
chr4	37463659	37463660	chr4:37463660:G:T	rs765608847	G	T	G	Sox2_MA0143.3	24	0	-	0	0	.
chr4	37555595	37555596	chr4:37555596:A:C	rs2941013	A	C	A	Sox2_MA0143.3	2	1	-	9.206767037375712	2.900948058900136	CCTTTGTC
chr4	37562070	37562071	chr4:37562071:A:G	rs60616535	A	G	A	Sox2_MA0143.3	-10	0	-	0	0	.
chr4	37562074	37562075	chr4:37562075:A:T	rs35878174	A	T	T	Sox2_MA0143.3	-14	0	-	0	0	.
chr4	37562079	37562080	chr4:37562080:A:G	rs62298245	A	G	A	Sox2_MA0143.3	-19	0	-	0	0	.
chr4	37662519	37662520	chr4:37662520:G:A	rs6833516	G	A	G	Sox2_MA0143.3	20	0	-	0	0	.
chr4	37693338	37693339	chr4:37693339:A:G	rs1834346	A	G	A	Sox2_MA0143.3	23	0	-	0	0	.
chr4	37761263	37761264	chr4:37761264:G:A	rs17578219	G	A	G	Sox2_MA0143.3	1	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr4	37769400	37769401	chr4:37769401:T:A	rs1030351	T	A	T	Sox2_MA0143.3	-9	0	-	0	0	.
chr4	37799980	37799981	chr4:37799981:C:G	rs16993933	C	G	C	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr4	37828665	37828666	chr4:37828666:A:G	rs2911909	A	G	G	Sox2_MA0143.3	23	0	+	0	0	.
chr4	38036103	38036104	chr4:38036104:T:C	rs6818409	T	C	C	Sox2_MA0143.3	15	0	+	0	0	.
chr4	38040725	38040726	chr4:38040726:G:A	rs67733859	G	A	G	Sox2_MA0143.3	7	1	+	8.864090315184848	3.5547341015215945	CCTTTGTG
chr4	38162402	38162403	chr4:38162403:A:G	rs112637871	A	G	A	Sox2_MA0143.3	15	0	+	0	0	.
chr4	38162541	38162542	chr4:38162542:A:C	chr4:38162542:A:C	A	C	A	Sox2_MA0143.3	23	0	-	0	0	.
chr4	38163878	38163879	chr4:38163879:T:C	rs570193078	T	C	T	Sox2_MA0143.3	3	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr4	38165431	38165432	chr4:38165432:A:G	rs13139753	A	G	A	Sox2_MA0143.3	-6	0	-	0	0	.
chr4	38179432	38179433	chr4:38179433:C:T	rs6854035	C	T	T	Sox2_MA0143.3	7	1	+	9.206767037375712	9.800647049772198	CCTTTGTC
chr4	38195535	38195536	chr4:38195536:A:G	rs2380963	A	G	G	Sox2_MA0143.3	2	1	-	9.800647049772198	3.494828071296623	CCTTTGTT
chr4	38204870	38204871	chr4:38204871:C:A	rs58640280	C	A	A	Sox2_MA0143.3	0	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr4	38204873	38204874	chr4:38204874:T:C	rs952197	T	C	C	Sox2_MA0143.3	3	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr4	38204896	38204897	chr4:38204897:G:A	rs73243322	G	A	G	Sox2_MA0143.3	26	0	+	0	0	.
chr4	38223405	38223406	chr4:38223406:T:C	rs10025453	T	C	T	Sox2_MA0143.3	16	0	-	0	0	.
chr4	38279246	38279247	chr4:38279247:C:G	rs13122511	C	G	C	Sox2_MA0143.3	15	0	-	0	0	.
chr4	38287664	38287665	chr4:38287665:C:T	rs76114976	C	T	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr4	38308935	38308936	chr4:38308936:G:A	rs6849215	G	A	A	Sox2_MA0143.3	-14	0	+	0	0	.
chr4	38308944	38308945	chr4:38308945:C:T	rs9999275	C	T	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr4	38310899	38310900	chr4:38310900:A:T	rs116534134	A	T	A	Sox2_MA0143.3	27	0	-	0	0	.
chr4	38359431	38359432	chr4:38359432:A:C	rs768131	A	C	C	Sox2_MA0143.3	25	0	+	0	0	.
chr4	38365902	38365903	chr4:38365903:T:C	rs4240244	T	C	C	Sox2_MA0143.3	14	0	+	0	0	.
chr4	38564120	38564121	chr4:38564121:G:A	rs7668096	G	A	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr4	38606090	38606091	chr4:38606091:T:C	rs61131231	T	C	T	Sox2_MA0143.3	24	0	+	0	0	.
chr4	38671257	38671258	chr4:38671258:G:T	chr4:38671258:G:T	G	T	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr4	38778918	38778919	chr4:38778919:A:G	rs11466615	A	G	G	Sox2_MA0143.3	12	0	-	0	0	.
chr4	38780859	38780860	chr4:38780860:C:G	rs7660429	C	G	C	Sox2_MA0143.3	16	0	-	0	0	.
chr4	38832524	38832525	chr4:38832525:C:G	rs114601407	C	G	G	Sox2_MA0143.3	17	0	-	0	0	.
chr4	38843576	38843577	chr4:38843577:G:A	rs7673348	G	A	A	Sox2_MA0143.3	-12	0	-	0	0	.
chr4	38870591	38870592	chr4:38870592:C:T	rs6824001	C	T	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr4	38872865	38872866	chr4:38872866:T:A	rs7667913	T	A	T	Sox2_MA0143.3	-10	0	-	0	0	.
chr4	38924693	38924694	chr4:38924694:G:A	rs28562966	G	A	A	Sox2_MA0143.3	12	0	-	0	0	.
chr4	39065244	39065245	chr4:39065245:T:G	rs1036043	T	G	T	Sox2_MA0143.3	24	0	+	0	0	.
chr4	39083318	39083319	chr4:39083319:G:A	rs2711936	G	A	A	Sox2_MA0143.3	-12	0	+	0	0	.
chr4	39469438	39469439	chr4:39469439:G:T	rs114957757	G	T	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr4	39498623	39498624	chr4:39498624:T:C	rs13135475	T	C	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr4	39816495	39816496	chr4:39816496:T:C	rs1003212	T	C	c	Sox2_MA0143.3	-12	0	+	0	0	.
chr4	40056078	40056079	chr4:40056079:C:T	rs1704156	C	T	C	Sox2_MA0143.3	9	0	+	0	0	.
chr4	40056079	40056080	chr4:40056080:C:T	rs567554584	C	T	C	Sox2_MA0143.3	10	0	+	0	0	.
chr4	40134676	40134677	chr4:40134677:A:T	rs13119145	A	T	A	Sox2_MA0143.3	-11	0	+	0	0	.
chr4	40255215	40255216	chr4:40255216:T:G	rs140087469	T	G	t	Sox2_MA0143.3	-13	0	+	0	0	.
chr4	40261515	40261516	chr4:40261516:C:T	rs11734992	C	T	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr4	40269291	40269292	chr4:40269292:C:G	rs1878895	C	G	G	Sox2_MA0143.3	17	0	+	0	0	.
chr4	40301791	40301792	chr4:40301792:C:T	rs7659738	C	T	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr4	40309318	40309319	chr4:40309319:T:C	rs11940839	T	C	T	Sox2_MA0143.3	-19	0	-	0	0	.
chr4	40316271	40316272	chr4:40316272:T:A	rs116544655	T	A	t	Sox2_MA0143.3	-11	0	+	0	0	.
chr4	40335407	40335408	chr4:40335408:G:A	rs549140303	G	A	G	Sox2_MA0143.3	14	0	+	0	0	.
chr4	40340600	40340601	chr4:40340601:T:G	rs10021263	T	G	T	Sox2_MA0143.3	17	0	-	0	0	.
chr4	40471766	40471767	chr4:40471767:A:G	rs3105209	A	G	A	Sox2_MA0143.3	-13	0	+	0	0	.
chr4	40586758	40586759	chr4:40586759:A:T	rs966462629	A	T	A	Sox2_MA0143.3	-8	0	+	0	0	.
chr4	40756108	40756109	chr4:40756109:T:A	rs6447388	T	A	T	Sox2_MA0143.3	6	1	+	9.206767037375712	2.298012258060492	CCTTTGTC
chr4	40801185	40801186	chr4:40801186:A:G	rs62302858	A	G	A	Sox2_MA0143.3	11	0	+	0	0	.
chr4	40831636	40831637	chr4:40831637:C:G	rs6821765	C	G	C	Sox2_MA0143.3	9	0	-	0	0	.
chr4	40834618	40834619	chr4:40834619:A:G	rs7693777	A	G	G	Sox2_MA0143.3	4	1	-	9.800647049772198	2.8918922704569785	CCTTTGTT
chr4	40851514	40851515	chr4:40851515:A:G	rs2437350	A	G	A	Sox2_MA0143.3	-14	0	+	0	0	.
chr4	40905718	40905719	chr4:40905719:G:C	rs73150535	G	C	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr4	40908788	40908789	chr4:40908789:A:G	chr4:40908789:A:G	A	G	A	Sox2_MA0143.3	3	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr4	40908791	40908792	chr4:40908792:G:T	rs114126290	G	T	G	Sox2_MA0143.3	0	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr4	40908810	40908811	chr4:40908811:G:C	rs114049223	G	C	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr4	40946876	40946877	chr4:40946877:C:A	rs187418281	C	A	C	Sox2_MA0143.3	27	0	-	0	0	.
chr4	40953418	40953419	chr4:40953419:G:A	rs75008763	G	A	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr4	41028801	41028802	chr4:41028802:G:A	rs373561833	G	A	G	Sox2_MA0143.3	9	0	-	0	0	.
chr4	41069452	41069453	chr4:41069453:C:G	rs140556301	C	G	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr4	41072410	41072411	chr4:41072411:C:T	rs577157327	C	T	C	Sox2_MA0143.3	1	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr4	41097203	41097204	chr4:41097204:G:A	rs10015784	G	A	A	Sox2_MA0143.3	22	0	-	0	0	.
chr4	41145265	41145266	chr4:41145266:A:C	rs73810843	A	C	A	Sox2_MA0143.3	-13	0	-	0	0	.
chr4	41146916	41146917	chr4:41146917:C:A	rs1250575036	C	A	C	Sox2_MA0143.3	7	1	-	8.676919043985553	9.613475778572903	CCATTGTG
chr4	41155925	41155926	chr4:41155926:G:A	rs76619415	G	A	A	Sox2_MA0143.3	-18	0	+	0	0	.
chr4	41209514	41209515	chr4:41209515:C:T	rs17443513	C	T	C	Sox2_MA0143.3	18	0	-	0	0	.
chr4	41270170	41270171	chr4:41270171:T:G	rs11728559	T	G	T	Sox2_MA0143.3	-17	0	-	0	0	.
chr4	41363333	41363334	chr4:41363334:G:A	rs78448075	G	A	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr4	41525169	41525170	chr4:41525170:A:G	rs188737989	A	G	A	Sox2_MA0143.3	22	0	+	0	0	.
chr4	41543746	41543747	chr4:41543747:A:C	rs10030961	A	C	A	Sox2_MA0143.3	7	1	-	9.800647049772198	8.864090315184848	CCTTTGTT
chr4	41568683	41568684	chr4:41568684:C:T	rs34218605	C	T	C	Sox2_MA0143.3	0	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr4	41612696	41612697	chr4:41612697:T:G	chr4:41612697:T:G	T	G	T	Sox2_MA0143.3	-10	0	+	0	0	.
chr4	41612697	41612698	chr4:41612698:C:A	chr4:41612698:C:A	C	A	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr4	41623000	41623001	chr4:41623001:C:G	rs73810289	C	G	C	Sox2_MA0143.3	9	0	-	0	0	.
chr4	41660984	41660985	chr4:41660985:A:C	rs7349706	A	C	A	Sox2_MA0143.3	13	0	-	0	0	.
chr4	41784186	41784187	chr4:41784187:C:A	rs77612607	C	A	C	Sox2_MA0143.3	18	0	+	0	0	.
chr4	41822688	41822689	chr4:41822689:C:G	rs6843545	C	G	C	Sox2_MA0143.3	5	1	-	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr4	41845043	41845044	chr4:41845044:A:T	rs73810406	A	T	A	Sox2_MA0143.3	27	0	+	0	0	.
chr4	41887367	41887368	chr4:41887368:T:C	rs7665313	T	C	T	Sox2_MA0143.3	2	1	+	3.5547341015215945	-2.751084876953981	CCTTTGTA
chr4	42114776	42114777	chr4:42114777:C:G	rs10016837	C	G	G	Sox2_MA0143.3	22	0	+	0	0	.
chr4	42217977	42217978	chr4:42217978:G:C	rs10030312	G	C	C	Sox2_MA0143.3	5	1	+	9.019595766176417	2.110840986861197	CCATTGTC
chr4	42267089	42267090	chr4:42267090:C:G	rs1843924	C	G	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr4	42285642	42285643	chr4:42285643:A:G	rs6831416	A	G	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr4	42311944	42311945	chr4:42311945:A:G	rs61155160	A	G	A	Sox2_MA0143.3	2	1	+	8.676919043985553	2.5582713367092715	CCATTGTG
chr4	42316627	42316628	chr4:42316628:G:C	rs112615448	G	C	G	Sox2_MA0143.3	0	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr4	42330065	42330066	chr4:42330066:C:T	rs750335	C	T	C	Sox2_MA0143.3	22	0	-	0	0	.
chr4	42330079	42330080	chr4:42330080:A:C	rs750334	A	C	C	Sox2_MA0143.3	8	0	-	0	0	.
chr4	42425720	42425721	chr4:42425721:G:A	rs564336466	G	A	G	Sox2_MA0143.3	0	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr4	42550319	42550320	chr4:42550320:G:A	rs4444865	G	A	A	Sox2_MA0143.3	13	0	+	0	0	.
chr4	42632881	42632882	chr4:42632882:G:A	rs111542721	G	A	G	Sox2_MA0143.3	22	0	+	0	0	.
chr4	42646591	42646592	chr4:42646592:C:T	rs115561293	C	T	C	Sox2_MA0143.3	0	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr4	42750790	42750791	chr4:42750791:T:C	rs4414992	T	C	T	Sox2_MA0143.3	-4	0	-	0	0	.
chr4	42768189	42768190	chr4:42768190:G:C	rs185002627	G	C	G	Sox2_MA0143.3	0	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr4	42768199	42768200	chr4:42768200:C:T	rs111250571	C	T	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr4	42806680	42806681	chr4:42806681:C:T	rs12643779	C	T	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr4	43180218	43180219	chr4:43180219:T:G	rs35194109	T	G	G	Sox2_MA0143.3	12	0	-	0	0	.
chr4	43180221	43180222	chr4:43180222:T:A	rs35148431	T	A	T	Sox2_MA0143.3	9	0	-	0	0	.
chr4	43191216	43191217	chr4:43191217:C:A	rs35023169	C	A	A	Sox2_MA0143.3	25	0	-	0	0	.
chr4	43312851	43312852	chr4:43312852:C:G	rs1838004	C	G	C	Sox2_MA0143.3	5	1	-	9.019595766176417	2.110840986861197	CCATTGTC
chr4	43325690	43325691	chr4:43325691:T:C	rs60606599	T	C	T	Sox2_MA0143.3	22	0	-	0	0	.
chr4	43331562	43331563	chr4:43331563:C:T	rs57197302	C	T	C	Sox2_MA0143.3	1	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr4	43673315	43673316	chr4:43673316:A:G	rs1655957	A	G	G	Sox2_MA0143.3	23	0	+	0	0	.
chr4	44181687	44181688	chr4:44181688:C:T	rs115894116	C	T	c	Sox2_MA0143.3	-18	0	+	0	0	.
chr4	44256676	44256677	chr4:44256677:A:G	rs76080430	A	G	A	Sox2_MA0143.3	7	1	+	3.5547341015215945	8.864090315184848	CCTTTGTA
chr4	44533090	44533091	chr4:44533091:C:A	rs73247601	C	A	C	Sox2_MA0143.3	1	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr4	44533108	44533109	chr4:44533109:A:G	rs7684615	A	G	G	Sox2_MA0143.3	19	0	+	0	0	.
chr4	44668558	44668559	chr4:44668559:C:T	rs9992113	C	T	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr4	44717030	44717031	chr4:44717031:A:T	rs1873522	A	T	A	Sox2_MA0143.3	4	1	-	8.676919043985553	1.7681642646703322	CCATTGTG
chr4	44806326	44806327	chr4:44806327:C:A	rs190746575	C	A	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr4	44848842	44848843	chr4:44848843:A:G	rs4267769	A	G	A	Sox2_MA0143.3	26	0	+	0	0	.
chr4	44913278	44913279	chr4:44913279:G:A	rs6839948	G	A	A	Sox2_MA0143.3	-6	0	+	0	0	.
chr4	45005223	45005224	chr4:45005224:T:C	rs4695070	T	C	T	Sox2_MA0143.3	-1	0	-	0	0	.
chr4	45033888	45033889	chr4:45033889:G:C	rs10805133	G	C	G	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr4	45057157	45057158	chr4:45057158:G:T	rs62411642	G	T	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr4	46414303	46414304	chr4:46414304:A:C	rs75461000	A	C	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr4	46851196	46851197	chr4:46851197:T:C	rs17598636	T	C	T	Sox2_MA0143.3	4	1	+	9.206767037375712	2.2980122580604916	CCTTTGTC
chr4	46875001	46875002	chr4:46875002:C:T	rs185313206	C	T	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr4	47066562	47066563	chr4:47066563:G:A	rs4279178	G	A	a	Sox2_MA0143.3	-8	0	-	0	0	.
chr4	47214285	47214286	chr4:47214286:A:G	rs1348222	A	G	A	Sox2_MA0143.3	16	0	+	0	0	.
chr4	47485822	47485823	chr4:47485823:A:C	rs4695237	A	C	A	Sox2_MA0143.3	-19	0	+	0	0	.
chr4	47485859	47485860	chr4:47485860:T:G	chr4:47485860:T:G	T	G	T	Sox2_MA0143.3	18	0	+	0	0	.
chr4	47550744	47550745	chr4:47550745:A:G	rs34442412	A	G	a	Sox2_MA0143.3	14	0	-	0	0	.
chr4	47550946	47550947	chr4:47550947:A:G	rs112932977	A	G	A	Sox2_MA0143.3	19	0	-	0	0	.
chr4	47646659	47646660	chr4:47646660:A:G	rs2351794	A	G	A	Sox2_MA0143.3	9	0	-	0	0	.
chr4	47647752	47647753	chr4:47647753:A:G	rs17572617	A	G	A	Sox2_MA0143.3	16	0	+	0	0	.
chr4	47913419	47913420	chr4:47913420:G:A	rs28460483	G	A	G	Sox2_MA0143.3	19	0	-	0	0	.
chr4	48071338	48071339	chr4:48071339:A:T	rs80255678	A	T	A	Sox2_MA0143.3	15	0	+	0	0	.
chr4	48128050	48128051	chr4:48128051:T:C	rs934980458	T	C	T	Sox2_MA0143.3	-19	0	-	0	0	.
chr4	48175726	48175727	chr4:48175727:A:G	rs7695902	A	G	G	Sox2_MA0143.3	11	0	+	0	0	.
chr4	48195127	48195128	chr4:48195128:T:C	rs12500534	T	C	T	Sox2_MA0143.3	21	0	-	0	0	.
chr4	48332153	48332154	chr4:48332154:C:G	rs57233179	C	G	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr4	48462661	48462662	chr4:48462662:C:G	rs4695382	C	G	C	Sox2_MA0143.3	18	0	-	0	0	.
chr4	48682080	48682081	chr4:48682081:C:G	rs17575972	C	G	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr4	48694195	48694196	chr4:48694196:A:T	rs61200248	A	T	A	Sox2_MA0143.3	-18	0	-	0	0	.
chr4	48780143	48780144	chr4:48780144:G:C	chr4:48780144:G:C	G	C	G	Sox2_MA0143.3	21	0	-	0	0	.
chr4	48949547	48949548	chr4:48949548:G:C	rs12511764	G	C	G	Sox2_MA0143.3	1	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr4	49226841	49226842	chr4:49226842:T:C	rs28489562	T	C	.	Sox2_MA0143.3	3	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr4	50278338	50278339	chr4:50278339:A:C	rs1218862047	A	C	.	Sox2_MA0143.3	17	0	+	0	0	.
chr4	51843769	51843770	chr4:51843770:G:A	rs1199443550	G	A	G	Sox2_MA0143.3	8	0	-	0	0	.
chr4	52250849	52250850	chr4:52250850:C:A	rs28708371	C	A	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr4	52323364	52323365	chr4:52323365:C:T	rs9684987	C	T	C	Sox2_MA0143.3	19	0	-	0	0	.
chr4	52559776	52559777	chr4:52559777:C:G	rs17051550	C	G	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr4	52619283	52619284	chr4:52619284:A:G	rs114477464	A	G	A	Sox2_MA0143.3	4	1	-	3.5547341015215945	-3.3540206777936254	CCTTTGTA
chr4	52839039	52839040	chr4:52839040:A:G	rs11934293	A	G	A	Sox2_MA0143.3	23	0	+	0	0	.
chr4	52843009	52843010	chr4:52843010:T:C	rs10517269	T	C	T	Sox2_MA0143.3	16	0	+	0	0	.
chr4	52863603	52863604	chr4:52863604:T:C	rs41279517	T	C	T	Sox2_MA0143.3	6	1	+	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr4	52873360	52873361	chr4:52873361:C:G	rs573273869	C	G	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr4	52883423	52883424	chr4:52883424:A:G	rs115683340	A	G	A	Sox2_MA0143.3	21	0	-	0	0	.
chr4	53051208	53051209	chr4:53051209:G:A	rs77780322	G	A	G	Sox2_MA0143.3	0	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr4	53103702	53103703	chr4:53103703:G:A	rs4864443	G	A	G	Sox2_MA0143.3	15	0	-	0	0	.
chr4	53377417	53377418	chr4:53377418:G:A	rs17082659	G	A	G	Sox2_MA0143.3	8	0	-	0	0	.
chr4	53379331	53379332	chr4:53379332:A:G	rs10011631	A	G	A	Sox2_MA0143.3	-16	0	-	0	0	.
chr4	53459822	53459823	chr4:53459823:T:C	rs1014056	T	C	C	Sox2_MA0143.3	18	0	-	0	0	.
chr4	53487047	53487048	chr4:53487048:C:T	rs7688853	C	T	T	Sox2_MA0143.3	20	0	+	0	0	.
chr4	53497496	53497497	chr4:53497497:C:T	rs114593513	C	T	C	Sox2_MA0143.3	8	0	+	0	0	.
chr4	53537808	53537809	chr4:53537809:G:A	rs4864466	G	A	A	Sox2_MA0143.3	1	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr4	53712544	53712545	chr4:53712545:A:G	rs1551880	A	G	G	Sox2_MA0143.3	25	0	-	0	0	.
chr4	53744694	53744695	chr4:53744695:T:C	rs11722881	T	C	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr4	53883553	53883554	chr4:53883554:T:A	rs1498814	T	A	A	Sox2_MA0143.3	-14	0	+	0	0	.
chr4	53988209	53988210	chr4:53988210:C:A	rs13134590	C	A	C	Sox2_MA0143.3	5	1	-	9.019595766176417	2.110840986861197	CCATTGTC
chr4	54050155	54050156	chr4:54050156:T:C	rs13144454	T	C	t	Sox2_MA0143.3	-15	0	+	0	0	.
chr4	54085358	54085359	chr4:54085359:A:G	rs145186128	A	G	A	Sox2_MA0143.3	20	0	-	0	0	.
chr4	54384651	54384652	chr4:54384652:G:C	rs914732387	G	C	.	Sox2_MA0143.3	16	0	-	0	0	.
chr4	54499345	54499346	chr4:54499346:C:A	rs182734117	C	A	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr4	54499373	54499374	chr4:54499374:C:A	rs62300084	C	A	C	Sox2_MA0143.3	12	0	+	0	0	.
chr4	54558205	54558206	chr4:54558206:C:T	rs218281	C	T	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr4	54633271	54633272	chr4:54633272:C:G	rs113059858	C	G	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr4	54913862	54913863	chr4:54913863:T:C	rs114477974	T	C	T	Sox2_MA0143.3	15	0	-	0	0	.
chr4	54930345	54930346	chr4:54930346:C:A	rs924865019	C	A	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr4	54954825	54954826	chr4:54954826:G:A	rs28588283	G	A	A	Sox2_MA0143.3	-4	0	+	0	0	.
chr4	54954843	54954844	chr4:54954844:A:G	rs28686925	A	G	A	Sox2_MA0143.3	14	0	+	0	0	.
chr4	55007758	55007759	chr4:55007759:C:T	rs6842830	C	T	T	Sox2_MA0143.3	-15	0	-	0	0	.
chr4	55025678	55025679	chr4:55025679:C:T	rs550280536	C	T	C	Sox2_MA0143.3	17	0	+	0	0	.
chr4	55076155	55076156	chr4:55076156:G:C	rs7659911	G	C	G	Sox2_MA0143.3	1	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr4	55080186	55080187	chr4:55080187:G:T	rs10006115	G	T	T	Sox2_MA0143.3	1	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr4	55096583	55096584	chr4:55096584:C:A	rs747885781	C	A	T	Sox2_MA0143.3	11	0	+	0	0	.
chr4	55172968	55172969	chr4:55172969:G:A	rs190766491	G	A	G	Sox2_MA0143.3	1	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr4	55178508	55178509	chr4:55178509:G:A	rs28534637	G	A	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr4	55178530	55178531	chr4:55178531:G:A	rs1078263	G	A	G	Sox2_MA0143.3	5	1	+	9.206767037375712	2.298012258060492	CCTTTGTC
chr4	55289666	55289667	chr4:55289667:T:G	rs56014578	T	G	T	Sox2_MA0143.3	13	0	-	0	0	.
chr4	55367384	55367385	chr4:55367385:T:G	rs6554276	T	G	T	Sox2_MA0143.3	24	0	+	0	0	.
chr4	55373654	55373655	chr4:55373655:C:G	rs10021233	C	G	C	Sox2_MA0143.3	0	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr4	55499867	55499868	chr4:55499868:A:G	rs62303732	A	G	A	Sox2_MA0143.3	21	0	+	0	0	.
chr4	55757329	55757330	chr4:55757330:C:T	rs28682941	C	T	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr4	55768375	55768376	chr4:55768376:T:G	rs1342045573	T	G	T	Sox2_MA0143.3	16	0	-	0	0	.
chr4	55906995	55906996	chr4:55906996:C:A	rs960841	C	A	A	Sox2_MA0143.3	10	0	-	0	0	.
chr4	56029841	56029842	chr4:56029842:A:C	rs111960067	A	C	A	Sox2_MA0143.3	-9	0	-	0	0	.
chr4	56080863	56080864	chr4:56080864:G:A	rs13113844	G	A	G	Sox2_MA0143.3	0	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr4	56127973	56127974	chr4:56127974:G:T	rs78635718	G	T	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr4	56235502	56235503	chr4:56235503:C:T	rs1471469	C	T	C	Sox2_MA0143.3	14	0	-	0	0	.
chr4	56320519	56320520	chr4:56320520:A:T	rs7683781	A	T	T	Sox2_MA0143.3	10	0	+	0	0	.
chr4	56570474	56570475	chr4:56570475:T:G	rs6858122	T	G	g	Sox2_MA0143.3	21	0	-	0	0	.
chr4	56573485	56573486	chr4:56573486:T:C	rs4242002	T	C	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr4	56654277	56654278	chr4:56654278:A:G	rs4460065	A	G	A	Sox2_MA0143.3	16	0	-	0	0	.
chr4	56654308	56654309	chr4:56654309:C:T	rs554718521	C	T	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr4	56660182	56660183	chr4:56660183:A:C	rs6817875	A	C	A	Sox2_MA0143.3	-19	0	-	0	0	.
chr4	56958382	56958383	chr4:56958383:A:C	chr4:56958383:A:C	A	C	A	Sox2_MA0143.3	-12	0	+	0	0	.
chr4	57021419	57021420	chr4:57021420:G:T	rs1718863	G	T	T	Sox2_MA0143.3	5	1	+	9.206767037375712	2.298012258060492	CCTTTGTC
chr4	57059145	57059146	chr4:57059146:A:G	rs6848820	A	G	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr4	57060569	57060570	chr4:57060570:T:C	rs7656865	T	C	T	Sox2_MA0143.3	-4	0	+	0	0	.
chr4	57061567	57061568	chr4:57061568:G:A	rs76333697	G	A	G	Sox2_MA0143.3	18	0	-	0	0	.
chr4	57073913	57073914	chr4:57073914:G:C	rs1718851	G	C	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr4	57091727	57091728	chr4:57091728:A:C	rs9992658	A	C	A	Sox2_MA0143.3	17	0	-	0	0	.
chr4	57320093	57320094	chr4:57320094:G:A	rs1917330	G	A	G	Sox2_MA0143.3	7	1	+	8.864090315184848	3.5547341015215945	CCTTTGTG
chr4	57323317	57323318	chr4:57323318:C:T	rs7656534	C	T	C	Sox2_MA0143.3	26	0	-	0	0	.
chr4	57375409	57375410	chr4:57375410:G:T	rs1524678	G	T	G	Sox2_MA0143.3	-9	0	+	0	0	.
chr4	57472548	57472549	chr4:57472549:C:T	rs71601696	C	T	C	Sox2_MA0143.3	0	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr4	57705494	57705495	chr4:57705495:T:G	rs62313844	T	G	c	Sox2_MA0143.3	4	1	+	8.864090315184848	1.9553355358696274	CCTTTGTG
chr4	57719787	57719788	chr4:57719788:A:C	rs495649	A	C	A	Sox2_MA0143.3	23	0	-	0	0	.
chr4	57719813	57719814	chr4:57719814:C:T	rs4865273	C	T	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr4	57795874	57795875	chr4:57795875:T:G	rs10034684	T	G	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr4	57928183	57928184	chr4:57928184:A:T	rs11133531	A	T	A	Sox2_MA0143.3	15	0	-	0	0	.
chr4	58103011	58103012	chr4:58103012:C:G	rs2660947	C	G	G	Sox2_MA0143.3	23	0	+	0	0	.
chr4	58103220	58103221	chr4:58103221:G:C	rs2660945	G	C	C	Sox2_MA0143.3	13	0	-	0	0	.
chr4	58103251	58103252	chr4:58103252:A:G	rs2611174	A	G	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr4	58333652	58333653	chr4:58333653:G:C	rs28886113	G	C	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr4	58493332	58493333	chr4:58493333:G:A	rs182454583	G	A	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr4	58502918	58502919	chr4:58502919:T:C	rs13135483	T	C	.	Sox2_MA0143.3	-10	0	+	0	0	.
chr4	58760979	58760980	chr4:58760980:T:C	rs11133585	T	C	T	Sox2_MA0143.3	14	0	+	0	0	.
chr4	58760989	58760990	chr4:58760990:G:A	rs35796601	G	A	G	Sox2_MA0143.3	24	0	+	0	0	.
chr4	59237967	59237968	chr4:59237968:A:G	rs6551671	A	G	A	Sox2_MA0143.3	9	0	+	0	0	.
chr4	59249436	59249437	chr4:59249437:G:A	rs905368	G	A	A	Sox2_MA0143.3	-11	0	+	0	0	.
chr4	59517724	59517725	chr4:59517725:T:C	rs4860627	T	C	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr4	59969724	59969725	chr4:59969725:A:G	rs349232	A	G	G	Sox2_MA0143.3	7	1	+	3.5547341015215945	8.864090315184848	CCTTTGTA
chr4	60309674	60309675	chr4:60309675:G:A	rs2045254	G	A	g	Sox2_MA0143.3	9	0	+	0	0	.
chr4	60404219	60404220	chr4:60404220:T:C	rs1350076	T	C	T	Sox2_MA0143.3	25	0	+	0	0	.
chr4	60443821	60443822	chr4:60443822:A:G	rs58905846	A	G	G	Sox2_MA0143.3	27	0	-	0	0	.
chr4	60522422	60522423	chr4:60522423:C:G	chr4:60522423:C:G	C	G	C	Sox2_MA0143.3	5	1	-	9.019595766176417	2.110840986861197	CCATTGTC
chr4	60522425	60522426	chr4:60522426:T:C	chr4:60522426:T:C	T	C	T	Sox2_MA0143.3	2	1	-	9.019595766176417	2.900948058900136	CCATTGTC
chr4	60575204	60575205	chr4:60575205:C:G	rs6858025	C	G	G	Sox2_MA0143.3	5	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr4	60638150	60638151	chr4:60638151:C:T	rs73823738	C	T	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr4	60780857	60780858	chr4:60780858:A:G	rs6551593	A	G	A	Sox2_MA0143.3	11	0	+	0	0	.
chr4	61189896	61189897	chr4:61189897:G:A	rs76672809	G	A	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr4	61200133	61200134	chr4:61200134:C:A	rs138925743	C	A	C	Sox2_MA0143.3	16	0	+	0	0	.
chr4	61200141	61200142	chr4:61200142:G:A	rs530002980	G	A	G	Sox2_MA0143.3	24	0	+	0	0	.
chr4	61337203	61337204	chr4:61337204:A:G	rs11723669	A	G	A	Sox2_MA0143.3	-20	0	+	0	0	.
chr4	61337222	61337223	chr4:61337223:C:A	rs72614734	C	A	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr4	61444062	61444063	chr4:61444063:G:C	rs11938177	G	C	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr4	61521421	61521422	chr4:61521422:A:G	rs335317	A	G	A	Sox2_MA0143.3	-10	0	-	0	0	.
chr4	61532146	61532147	chr4:61532147:G:A	rs6551631	G	A	G	Sox2_MA0143.3	0	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr4	62193078	62193079	chr4:62193079:C:T	rs4397024	C	T	T	Sox2_MA0143.3	26	0	-	0	0	.
chr4	62522545	62522546	chr4:62522546:C:T	rs6857651	C	T	T	Sox2_MA0143.3	-15	0	+	0	0	.
chr4	62561083	62561084	chr4:62561084:C:G	rs11732340	C	G	C	Sox2_MA0143.3	11	0	-	0	0	.
chr4	62646124	62646125	chr4:62646125:C:T	rs28893226	C	T	C	Sox2_MA0143.3	11	0	+	0	0	.
chr4	62882189	62882190	chr4:62882190:A:G	rs4470662	A	G	G	Sox2_MA0143.3	19	0	+	0	0	.
chr4	62899650	62899651	chr4:62899651:C:A	rs28536630	C	A	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr4	62899724	62899725	chr4:62899725:T:A	rs28621996	T	A	T	Sox2_MA0143.3	-15	0	-	0	0	.
chr4	63212234	63212235	chr4:63212235:G:A	rs58422159	G	A	G	Sox2_MA0143.3	1	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr4	63617503	63617504	chr4:63617504:C:T	rs17083919	C	T	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr4	63617504	63617505	chr4:63617505:A:C	rs115300963	A	C	A	Sox2_MA0143.3	-12	0	-	0	0	.
chr4	64002563	64002564	chr4:64002564:G:T	rs10866143	G	T	T	Sox2_MA0143.3	-12	0	-	0	0	.
chr4	64146538	64146539	chr4:64146539:C:A	rs7671715	C	A	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr4	64204387	64204388	chr4:64204388:A:G	rs9993944	A	G	A	Sox2_MA0143.3	22	0	-	0	0	.
chr4	64216843	64216844	chr4:64216844:A:T	rs73226348	A	T	A	Sox2_MA0143.3	20	0	-	0	0	.
chr4	64442695	64442696	chr4:64442696:A:T	rs10029805	A	T	a	Sox2_MA0143.3	13	0	+	0	0	.
chr4	64640156	64640157	chr4:64640157:G:T	rs7654373	G	T	G	Sox2_MA0143.3	0	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr4	64651720	64651721	chr4:64651721:C:T	rs10028130	C	T	T	Sox2_MA0143.3	-9	0	-	0	0	.
chr4	64695997	64695998	chr4:64695998:G:A	rs7669323	G	A	A	Sox2_MA0143.3	5	1	+	9.019595766176417	2.110840986861197	CCATTGTC
chr4	64727958	64727959	chr4:64727959:T:C	rs2115976	T	C	T	Sox2_MA0143.3	-14	0	+	0	0	.
chr4	64729363	64729364	chr4:64729364:C:T	rs7695484	C	T	C	Sox2_MA0143.3	7	1	+	9.206767037375712	9.800647049772198	CCTTTGTC
chr4	65147209	65147210	chr4:65147210:G:A	rs454638	G	A	A	Sox2_MA0143.3	-7	0	-	0	0	.
chr4	65392554	65392555	chr4:65392555:G:A	rs1376416	G	A	A	Sox2_MA0143.3	18	0	-	0	0	.
chr4	65512765	65512766	chr4:65512766:C:T	rs28546764	C	T	C	Sox2_MA0143.3	19	0	-	0	0	.
chr4	65566190	65566191	chr4:65566191:T:C	rs11931601	T	C	T	Sox2_MA0143.3	-14	0	-	0	0	.
chr4	65581184	65581185	chr4:65581185:T:C	rs74498418	T	C	T	Sox2_MA0143.3	16	0	+	0	0	.
chr4	65705067	65705068	chr4:65705068:T:C	rs36111876	T	C	T	Sox2_MA0143.3	13	0	+	0	0	.
chr4	65868117	65868118	chr4:65868118:A:G	rs9996088	A	G	A	Sox2_MA0143.3	19	0	-	0	0	.
chr4	66009404	66009405	chr4:66009405:C:T	rs2614879	C	T	T	Sox2_MA0143.3	23	0	+	0	0	.
chr4	66023366	66023367	chr4:66023367:T:C	rs6811031	T	C	t	Sox2_MA0143.3	-4	0	+	0	0	.
chr4	66284952	66284953	chr4:66284953:G:T	rs13116406	G	T	T	Sox2_MA0143.3	-15	0	+	0	0	.
chr4	66442064	66442065	chr4:66442065:T:C	rs78041025	T	C	T	Sox2_MA0143.3	-18	0	+	0	0	.
chr4	66591543	66591544	chr4:66591544:G:A	rs77968099	G	A	g	Sox2_MA0143.3	15	0	+	0	0	.
chr4	66688468	66688469	chr4:66688469:A:G	rs72644486	A	G	A	Sox2_MA0143.3	26	0	+	0	0	.
chr4	66888552	66888553	chr4:66888553:G:A	rs17087614	G	A	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr4	66906373	66906374	chr4:66906374:G:T	rs1351465	G	T	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr4	67250644	67250645	chr4:67250645:G:A	rs77854123	G	A	G	Sox2_MA0143.3	-16	0	-	0	0	.
chr4	67327960	67327961	chr4:67327961:C:T	rs62317412	C	T	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr4	67381224	67381225	chr4:67381225:G:A	rs150627785	G	A	-	Sox2_MA0143.3	-20	0	+	0	0	.
chr4	67381242	67381243	chr4:67381243:G:A	rs113976739	G	A	-	Sox2_MA0143.3	-2	0	+	0	0	.
chr4	67381538	67381539	chr4:67381539:G:A	rs148721534	G	A	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr4	67438495	67438496	chr4:67438496:T:C	rs6811666	T	C	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr4	67521584	67521585	chr4:67521585:T:A	rs115587029	T	A	T	Sox2_MA0143.3	23	0	+	0	0	.
chr4	67532343	67532344	chr4:67532344:G:C	rs355482	G	C	C	Sox2_MA0143.3	26	0	+	0	0	.
chr4	67549443	67549444	chr4:67549444:G:C	rs143039855	G	C	G	Sox2_MA0143.3	7	1	+	8.864090315184848	9.206767037375712	CCTTTGTG
chr4	67636946	67636947	chr4:67636947:G:T	rs148101825	G	T	-	Sox2_MA0143.3	-20	0	+	0	0	.
chr4	67762206	67762207	chr4:67762207:A:G	rs900790	A	G	A	Sox2_MA0143.3	-17	0	-	0	0	.
chr4	67961859	67961860	chr4:67961860:G:A	rs4260588	G	A	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr4	68368040	68368041	chr4:68368041:G:A	rs140537299	G	A	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr4	68498944	68498945	chr4:68498945:A:C	rs62317908	A	C	a	Sox2_MA0143.3	18	0	-	0	0	.
chr4	68655691	68655692	chr4:68655692:T:C	rs75435625	T	C	c	Sox2_MA0143.3	18	0	+	0	0	.
chr4	68744681	68744682	chr4:68744682:T:C	rs72636512	T	C	C	Sox2_MA0143.3	14	0	-	0	0	.
chr4	68744711	68744712	chr4:68744712:G:A	rs3100644	G	A	g	Sox2_MA0143.3	-16	0	-	0	0	.
chr4	68748281	68748282	chr4:68748282:G:A	rs114365974	G	A	G	Sox2_MA0143.3	-2	0	+	0	0	.
chr4	68748306	68748307	chr4:68748307:A:G	rs6600842	A	G	A	Sox2_MA0143.3	23	0	+	0	0	.
chr4	68811237	68811238	chr4:68811238:T:C	rs77032945	T	C	T	Sox2_MA0143.3	18	0	-	0	0	.
chr4	68861501	68861502	chr4:68861502:C:T	rs78060896	C	T	c	Sox2_MA0143.3	-2	0	+	0	0	.
chr4	68948822	68948823	chr4:68948823:C:T	rs10006282	C	T	T	Sox2_MA0143.3	-3	0	-	0	0	.
chr4	69098552	69098553	chr4:69098553:A:G	rs28365062	A	G	.	Sox2_MA0143.3	16	0	-	0	0	.
chr4	69098569	69098570	chr4:69098570:G:A	rs763465410	G	A	.	Sox2_MA0143.3	-1	0	-	0	0	.
chr4	69108202	69108203	chr4:69108203:C:T	rs57913007	C	T	.	Sox2_MA0143.3	11	0	+	0	0	.
chr4	69147495	69147496	chr4:69147496:C:T	rs4457017	C	T	.	Sox2_MA0143.3	10	0	-	0	0	.
chr4	69274342	69274343	chr4:69274343:G:T	rs72641843	G	T	.	Sox2_MA0143.3	-6	0	-	0	0	.
chr4	69419026	69419027	chr4:69419027:T:C	rs2642839	T	C	.	Sox2_MA0143.3	-8	0	+	0	0	.
chr4	69760483	69760484	chr4:69760484:T:C	rs79501604	T	C	T	Sox2_MA0143.3	11	0	+	0	0	.
chr4	70235853	70235854	chr4:70235854:G:A	rs57445959	G	A	A	Sox2_MA0143.3	11	0	-	0	0	.
chr4	70254165	70254166	chr4:70254166:T:A	rs62305571	T	A	A	Sox2_MA0143.3	-12	0	+	0	0	.
chr4	70254173	70254174	chr4:70254174:C:T	rs62305572	C	T	T	Sox2_MA0143.3	-4	0	+	0	0	.
chr4	70460605	70460606	chr4:70460606:C:T	rs35299468	C	T	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr4	70577539	70577540	chr4:70577540:A:G	rs17149040	A	G	A	Sox2_MA0143.3	3	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr4	70739673	70739674	chr4:70739674:A:G	rs6815629	A	G	A	Sox2_MA0143.3	12	0	-	0	0	.
chr4	70887195	70887196	chr4:70887196:A:G	rs139930721	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr4	70927976	70927977	chr4:70927977:T:C	rs6820372	T	C	T	Sox2_MA0143.3	-6	0	+	0	0	.
chr4	71009658	71009659	chr4:71009659:A:G	rs541250524	A	G	A	Sox2_MA0143.3	-10	0	+	0	0	.
chr4	71093700	71093701	chr4:71093701:G:A	rs10805079	G	A	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr4	71095501	71095502	chr4:71095502:G:C	rs16845769	G	C	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr4	71127224	71127225	chr4:71127225:A:G	rs901827615	A	G	A	Sox2_MA0143.3	11	0	+	0	0	.
chr4	71212552	71212553	chr4:71212553:A:G	rs113766615	A	G	A	Sox2_MA0143.3	14	0	-	0	0	.
chr4	71550540	71550541	chr4:71550541:T:C	rs7685152	T	C	T	Sox2_MA0143.3	-10	0	+	0	0	.
chr4	71609779	71609780	chr4:71609780:C:T	rs28590135	C	T	C	Sox2_MA0143.3	13	0	-	0	0	.
chr4	71834028	71834029	chr4:71834029:C:G	rs17766549	C	G	.	Sox2_MA0143.3	-14	0	+	0	0	.
chr4	71834060	71834061	chr4:71834061:A:G	rs1520498	A	G	.	Sox2_MA0143.3	18	0	+	0	0	.
chr4	71878659	71878660	chr4:71878660:T:C	rs16847182	T	C	.	Sox2_MA0143.3	-20	0	+	0	0	.
chr4	72024757	72024758	chr4:72024758:C:T	rs6446793	C	T	C	Sox2_MA0143.3	7	1	-	8.864090315184848	3.5547341015215945	CCTTTGTG
chr4	72489482	72489483	chr4:72489483:C:A	rs788921	C	A	A	Sox2_MA0143.3	25	0	+	0	0	.
chr4	72592331	72592332	chr4:72592332:G:A	rs6831742	G	A	G	Sox2_MA0143.3	19	0	+	0	0	.
chr4	72713398	72713399	chr4:72713399:T:A	rs986398	T	A	A	Sox2_MA0143.3	6	1	+	9.206767037375712	2.298012258060492	CCTTTGTC
chr4	72762324	72762325	chr4:72762325:C:T	rs10020776	C	T	C	Sox2_MA0143.3	15	0	+	0	0	.
chr4	72899595	72899596	chr4:72899596:T:C	rs6818977	T	C	t	Sox2_MA0143.3	-2	0	+	0	0	.
chr4	72925864	72925865	chr4:72925865:G:A	rs11936245	G	A	-	Sox2_MA0143.3	-15	0	-	0	0	.
chr4	72930855	72930856	chr4:72930856:T:C	rs6840693	T	C	C	Sox2_MA0143.3	23	0	+	0	0	.
chr4	72931510	72931511	chr4:72931511:T:G	rs6446907	T	G	G	Sox2_MA0143.3	7	1	+	9.800647049772198	8.864090315184848	CCTTTGTT
chr4	73599368	73599369	chr4:73599369:C:A	rs1247654	C	A	A	Sox2_MA0143.3	-2	0	-	0	0	.
chr4	73677174	73677175	chr4:73677175:G:C	rs1247632	G	C	G	Sox2_MA0143.3	16	0	+	0	0	.
chr4	73725675	73725676	chr4:73725676:C:A	rs4694634	C	A	A	Sox2_MA0143.3	11	0	-	0	0	.
chr4	73725685	73725686	chr4:73725686:G:A	rs74468557	G	A	G	Sox2_MA0143.3	1	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr4	73751317	73751318	chr4:73751318:A:C	rs16849958	A	C	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr4	73929413	73929414	chr4:73929414:C:T	rs487834	C	T	T	Sox2_MA0143.3	7	1	-	8.864090315184848	3.5547341015215945	CCTTTGTG
chr4	73979699	73979700	chr4:73979700:A:C	rs1435520	A	C	A	Sox2_MA0143.3	17	0	+	0	0	.
chr4	73998832	73998833	chr4:73998833:G:C	rs352046	G	C	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr4	74292175	74292176	chr4:74292176:A:C	rs114782688	A	C	A	Sox2_MA0143.3	14	0	+	0	0	.
chr4	74342749	74342750	chr4:74342750:A:G	rs78113341	A	G	A	Sox2_MA0143.3	-14	0	-	0	0	.
chr4	74374420	74374421	chr4:74374421:C:T	rs61684000	C	T	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr4	74392302	74392303	chr4:74392303:C:T	rs6446994	C	T	T	Sox2_MA0143.3	23	0	-	0	0	.
chr4	74392334	74392335	chr4:74392335:T:C	rs6446995	T	C	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr4	74468101	74468102	chr4:74468102:G:A	rs1691280	G	A	g	Sox2_MA0143.3	-19	0	+	0	0	.
chr4	74531892	74531893	chr4:74531893:A:G	rs4694193	A	G	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr4	74544282	74544283	chr4:74544283:C:T	rs556923726	C	T	C	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr4	74544299	74544300	chr4:74544300:C:A	rs79764308	C	A	C	Sox2_MA0143.3	17	0	+	0	0	.
chr4	74548001	74548002	chr4:74548002:T:C	rs4694696	T	C	T	Sox2_MA0143.3	11	0	-	0	0	.
chr4	74555231	74555232	chr4:74555232:A:G	rs13136463	A	G	A	Sox2_MA0143.3	9	0	-	0	0	.
chr4	74555951	74555952	chr4:74555952:G:C	rs7667472	G	C	C	Sox2_MA0143.3	26	0	-	0	0	.
chr4	74599201	74599202	chr4:74599202:A:G	rs6419130	A	G	A	Sox2_MA0143.3	6	1	-	9.613475778572903	2.7047209992576837	CCATTGTT
chr4	74624661	74624662	chr4:74624662:T:G	rs74848244	T	G	G	Sox2_MA0143.3	13	0	-	0	0	.
chr4	74668976	74668977	chr4:74668977:A:T	rs12508014	A	T	A	Sox2_MA0143.3	-12	0	-	0	0	.
chr4	74696491	74696492	chr4:74696492:G:T	rs145857083	G	T	G	Sox2_MA0143.3	25	0	-	0	0	.
chr4	74757912	74757913	chr4:74757913:C:A	rs6532367	C	A	A	Sox2_MA0143.3	5	1	-	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr4	74847372	74847373	chr4:74847373:G:A	rs17246948	G	A	G	Sox2_MA0143.3	18	0	-	0	0	.
chr4	75037431	75037432	chr4:75037432:A:G	rs3775530	A	G	G	Sox2_MA0143.3	3	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr4	75099752	75099753	chr4:75099753:C:T	rs76089161	C	T	C	Sox2_MA0143.3	20	0	-	0	0	.
chr4	75126465	75126466	chr4:75126466:C:T	rs307634	C	T	C	Sox2_MA0143.3	12	0	+	0	0	.
chr4	75176292	75176293	chr4:75176293:G:A	rs28505529	G	A	G	Sox2_MA0143.3	17	0	-	0	0	.
chr4	75250152	75250153	chr4:75250153:C:T	rs145228521	C	T	C	Sox2_MA0143.3	0	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr4	75309602	75309603	chr4:75309603:C:T	rs13434692	C	T	C	Sox2_MA0143.3	23	0	+	0	0	.
chr4	75313898	75313899	chr4:75313899:T:C	rs2172589	T	C	C	Sox2_MA0143.3	6	1	+	9.613475778572903	2.7047209992576837	CCATTGTT
chr4	75497466	75497467	chr4:75497467:C:T	rs74868069	C	T	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr4	75686666	75686667	chr4:75686667:T:C	rs60945555	T	C	T	Sox2_MA0143.3	26	0	-	0	0	.
chr4	75916227	75916228	chr4:75916228:T:C	rs140663504	T	C	T	Sox2_MA0143.3	24	0	+	0	0	.
chr4	76060158	76060159	chr4:76060159:A:C	rs4432767	A	C	A	Sox2_MA0143.3	-9	0	+	0	0	.
chr4	76060190	76060191	chr4:76060191:C:G	rs4621456	C	G	C	Sox2_MA0143.3	23	0	+	0	0	.
chr4	76069213	76069214	chr4:76069214:T:G	rs80060995	T	G	T	Sox2_MA0143.3	-15	0	-	0	0	.
chr4	76089392	76089393	chr4:76089393:G:T	rs12504915	G	T	A	Sox2_MA0143.3	-4	0	+	0	0	.
chr4	76106734	76106735	chr4:76106735:C:T	rs4277800	C	T	T	Sox2_MA0143.3	-12	0	+	0	0	.
chr4	76234332	76234333	chr4:76234333:A:C	rs77332139	A	C	A	Sox2_MA0143.3	-17	0	+	0	0	.
chr4	76234353	76234354	chr4:76234354:T:C	rs6837231	T	C	C	Sox2_MA0143.3	4	1	+	8.864090315184848	1.9553355358696274	CCTTTGTG
chr4	76236793	76236794	chr4:76236794:G:A	rs35851125	G	A	G	Sox2_MA0143.3	12	0	-	0	0	.
chr4	76255873	76255874	chr4:76255874:A:G	rs17001726	A	G	A	Sox2_MA0143.3	4	1	-	9.800647049772198	2.8918922704569785	CCTTTGTT
chr4	76275694	76275695	chr4:76275695:A:G	rs6823078	A	G	A	Sox2_MA0143.3	-7	0	-	0	0	.
chr4	76489164	76489165	chr4:76489165:C:A	rs4859682	C	A	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr4	76489739	76489740	chr4:76489740:T:C	rs4516740	T	C	T	Sox2_MA0143.3	10	0	+	0	0	.
chr4	76498814	76498815	chr4:76498815:T:C	rs183624341	T	C	T	Sox2_MA0143.3	19	0	+	0	0	.
chr4	76689587	76689588	chr4:76689588:G:C	rs754132209	G	C	G	Sox2_MA0143.3	19	0	+	0	0	.
chr4	76720293	76720294	chr4:76720294:T:G	rs11732605	T	G	T	Sox2_MA0143.3	12	0	-	0	0	.
chr4	76841360	76841361	chr4:76841361:T:C	rs9307200	T	C	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr4	76857359	76857360	chr4:76857360:A:G	rs72663281	A	G	A	Sox2_MA0143.3	12	0	-	0	0	.
chr4	76868452	76868453	chr4:76868453:G:A	chr4:76868453:G:A	G	A	G	Sox2_MA0143.3	13	0	-	0	0	.
chr4	76989645	76989646	chr4:76989646:C:T	rs28678521	C	T	C	Sox2_MA0143.3	14	0	-	0	0	.
chr4	76989656	76989657	chr4:76989657:A:G	rs28402896	A	G	A	Sox2_MA0143.3	3	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr4	77065574	77065575	chr4:77065575:T:C	rs4252828	T	C	T	Sox2_MA0143.3	27	0	-	0	0	.
chr4	77096073	77096074	chr4:77096074:G:A	rs3886712	G	A	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr4	77156588	77156589	chr4:77156589:G:A	rs4150037	G	A	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr4	77177325	77177326	chr4:77177326:A:G	rs72861671	A	G	A	Sox2_MA0143.3	24	0	-	0	0	.
chr4	77177498	77177499	chr4:77177499:G:A	rs114549795	G	A	G	Sox2_MA0143.3	-9	0	+	0	0	.
chr4	77206852	77206853	chr4:77206853:C:T	rs12508219	C	T	C	Sox2_MA0143.3	23	0	+	0	0	.
chr4	77342412	77342413	chr4:77342413:G:A	rs10014372	G	A	G	Sox2_MA0143.3	15	0	-	0	0	.
chr4	77345061	77345062	chr4:77345062:C:T	rs10027556	C	T	T	Sox2_MA0143.3	5	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr4	77441092	77441093	chr4:77441093:G:T	rs2866292	G	T	T	Sox2_MA0143.3	-19	0	+	0	0	.
chr4	77441115	77441116	chr4:77441116:T:C	rs4859847	T	C	T	Sox2_MA0143.3	4	1	+	8.676919043985553	1.7681642646703322	CCATTGTG
chr4	77587303	77587304	chr4:77587304:T:G	rs78132822	T	G	T	Sox2_MA0143.3	23	0	+	0	0	.
chr4	77599884	77599885	chr4:77599885:C:T	rs28465432	C	T	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr4	77921622	77921623	chr4:77921623:C:T	rs75939945	C	T	C	Sox2_MA0143.3	26	0	-	0	0	.
chr4	77952474	77952475	chr4:77952475:G:A	rs17002849	G	A	g	Sox2_MA0143.3	-17	0	+	0	0	.
chr4	77956602	77956603	chr4:77956603:A:G	rs10030568	A	G	A	Sox2_MA0143.3	-20	0	-	0	0	.
chr4	78014884	78014885	chr4:78014885:A:G	rs62310787	A	G	A	Sox2_MA0143.3	-12	0	+	0	0	.
chr4	78014919	78014920	chr4:78014920:A:T	rs2102191	A	T	A	Sox2_MA0143.3	23	0	+	0	0	.
chr4	78069074	78069075	chr4:78069075:C:A	rs873454	C	A	C	Sox2_MA0143.3	-20	0	-	0	0	.
chr4	78156020	78156021	chr4:78156021:C:T	rs74995858	C	T	C	Sox2_MA0143.3	10	0	+	0	0	.
chr4	78176974	78176975	chr4:78176975:T:G	rs17003021	T	G	T	Sox2_MA0143.3	17	0	+	0	0	.
chr4	78331947	78331948	chr4:78331948:A:G	rs345497	A	G	G	Sox2_MA0143.3	11	0	-	0	0	.
chr4	78332372	78332373	chr4:78332373:C:T	rs345495	C	T	C	Sox2_MA0143.3	-5	0	-	0	0	.
chr4	78436345	78436346	chr4:78436346:A:G	rs66914138	A	G	A	Sox2_MA0143.3	-5	0	-	0	0	.
chr4	78468665	78468666	chr4:78468666:A:G	rs4975125	A	G	A	Sox2_MA0143.3	-13	0	+	0	0	.
chr4	78528380	78528381	chr4:78528381:A:G	rs10030759	A	G	A	Sox2_MA0143.3	-17	0	+	0	0	.
chr4	78534578	78534579	chr4:78534579:C:T	rs4975139	C	T	C	Sox2_MA0143.3	22	0	-	0	0	.
chr4	78542670	78542671	chr4:78542671:C:G	rs186398273	C	G	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr4	78589303	78589304	chr4:78589304:A:G	rs7683582	A	G	A	Sox2_MA0143.3	22	0	-	0	0	.
chr4	78589336	78589337	chr4:78589337:A:G	rs115259705	A	G	A	Sox2_MA0143.3	-11	0	-	0	0	.
chr4	78650599	78650600	chr4:78650600:C:T	rs757769780	C	T	C	Sox2_MA0143.3	27	0	+	0	0	.
chr4	78662037	78662038	chr4:78662038:T:C	rs971428210	T	C	T	Sox2_MA0143.3	6	1	+	9.613475778572903	2.7047209992576837	CCATTGTT
chr4	78704722	78704723	chr4:78704723:C:T	rs535676846	C	T	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr4	78704723	78704724	chr4:78704724:G:A	rs17472967	G	A	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr4	78733078	78733079	chr4:78733079:A:C	rs1482709821	A	C	A	Sox2_MA0143.3	17	0	+	0	0	.
chr4	78784375	78784376	chr4:78784376:A:G	rs1334093314	A	G	A	Sox2_MA0143.3	17	0	+	0	0	.
chr4	78938480	78938481	chr4:78938481:T:C	rs557174830	T	C	T	Sox2_MA0143.3	-7	0	-	0	0	.
chr4	79014464	79014465	chr4:79014465:A:G	rs1480724	A	G	A	Sox2_MA0143.3	21	0	+	0	0	.
chr4	79083995	79083996	chr4:79083996:A:G	rs17003626	A	G	A	Sox2_MA0143.3	9	0	-	0	0	.
chr4	79117452	79117453	chr4:79117453:C:T	rs28539890	C	T	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr4	79340426	79340427	chr4:79340427:A:G	rs10050068	A	G	A	Sox2_MA0143.3	6	1	-	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr4	79471877	79471878	chr4:79471878:G:A	rs10033347	G	A	G	Sox2_MA0143.3	7	1	+	8.864090315184848	3.5547341015215945	CCTTTGTG
chr4	79687095	79687096	chr4:79687096:A:G	rs4580675	A	G	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr4	79687113	79687114	chr4:79687114:C:G	rs4519822	C	G	C	Sox2_MA0143.3	14	0	+	0	0	.
chr4	79690581	79690582	chr4:79690582:G:A	rs6845115	G	A	A	Sox2_MA0143.3	-17	0	+	0	0	.
chr4	79756158	79756159	chr4:79756159:A:G	rs7669579	A	G	A	Sox2_MA0143.3	9	0	-	0	0	.
chr4	79871959	79871960	chr4:79871960:C:T	rs11735728	C	T	C	Sox2_MA0143.3	-5	0	-	0	0	.
chr4	79905907	79905908	chr4:79905908:T:C	rs7747	T	C	T	Sox2_MA0143.3	-20	0	+	0	0	.
chr4	79923631	79923632	chr4:79923632:C:T	rs6534653	C	T	T	Sox2_MA0143.3	10	0	+	0	0	.
chr4	80172059	80172060	chr4:80172060:T:C	rs35611209	T	C	T	Sox2_MA0143.3	25	0	-	0	0	.
chr4	80174144	80174145	chr4:80174145:T:G	rs60855654	T	G	G	Sox2_MA0143.3	14	0	+	0	0	.
chr4	80182280	80182281	chr4:80182281:A:C	rs79237210	A	C	A	Sox2_MA0143.3	-12	0	-	0	0	.
chr4	80206890	80206891	chr4:80206891:T:G	rs12711161	T	G	G	Sox2_MA0143.3	11	0	+	0	0	.
chr4	80253082	80253083	chr4:80253083:A:G	rs6534834	A	G	G	Sox2_MA0143.3	18	0	+	0	0	.
chr4	80501185	80501186	chr4:80501186:T:C	rs6848986	T	C	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr4	80532915	80532916	chr4:80532916:G:A	rs35565546	G	A	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr4	80709228	80709229	chr4:80709229:C:A	rs187283404	C	A	A	Sox2_MA0143.3	1	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr4	80712431	80712432	chr4:80712432:A:G	rs432324	A	G	A	Sox2_MA0143.3	23	0	-	0	0	.
chr4	81069738	81069739	chr4:81069739:C:T	rs549548793	C	T	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr4	81069746	81069747	chr4:81069747:A:G	rs7692471	A	G	A	Sox2_MA0143.3	-9	0	-	0	0	.
chr4	81106363	81106364	chr4:81106364:G:C	rs77149382	G	C	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr4	81113912	81113913	chr4:81113913:T:C	rs7675843	T	C	t	Sox2_MA0143.3	-8	0	-	0	0	.
chr4	81130313	81130314	chr4:81130314:G:A	rs2099930	G	A	G	Sox2_MA0143.3	15	0	+	0	0	.
chr4	81143079	81143080	chr4:81143080:C:T	rs28377778	C	T	T	Sox2_MA0143.3	-6	0	-	0	0	.
chr4	81198348	81198349	chr4:81198349:T:G	chr4:81198349:T:G	T	G	T	Sox2_MA0143.3	-14	0	-	0	0	.
chr4	81278616	81278617	chr4:81278617:T:G	rs12505180	T	G	T	Sox2_MA0143.3	25	0	+	0	0	.
chr4	81445260	81445261	chr4:81445261:A:G	rs79323742	A	G	A	Sox2_MA0143.3	-20	0	+	0	0	.
chr4	81454604	81454605	chr4:81454605:C:T	rs143465537	C	T	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr4	81472424	81472425	chr4:81472425:G:A	rs781439716	G	A	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr4	81562313	81562314	chr4:81562314:G:A	rs17005163	G	A	G	Sox2_MA0143.3	25	0	-	0	0	.
chr4	81594889	81594890	chr4:81594890:C:T	rs765944385	C	T	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr4	81629514	81629515	chr4:81629515:T:C	rs11099486	T	C	T	Sox2_MA0143.3	-5	0	+	0	0	.
chr4	81629516	81629517	chr4:81629517:C:T	rs11099487	C	T	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr4	81633200	81633201	chr4:81633201:G:A	rs190317080	G	A	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr4	81633206	81633207	chr4:81633207:G:A	rs4309830	G	A	A	Sox2_MA0143.3	-13	0	-	0	0	.
chr4	81634186	81634187	chr4:81634187:T:C	rs12501674	T	C	T	Sox2_MA0143.3	-18	0	-	0	0	.
chr4	81685339	81685340	chr4:81685340:G:A	rs74772714	G	A	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr4	81757610	81757611	chr4:81757611:T:C	rs1553082	T	C	T	Sox2_MA0143.3	17	0	-	0	0	.
chr4	81963789	81963790	chr4:81963790:T:G	rs320765	T	G	G	Sox2_MA0143.3	-12	0	+	0	0	.
chr4	81989449	81989450	chr4:81989450:C:T	rs1443786	C	T	T	Sox2_MA0143.3	16	0	+	0	0	.
chr4	82230594	82230595	chr4:82230595:A:G	rs114549454	A	G	A	Sox2_MA0143.3	-2	0	+	0	0	.
chr4	82372839	82372840	chr4:82372840:T:C	rs114878012	T	C	T	Sox2_MA0143.3	11	0	+	0	0	.
chr4	82424794	82424795	chr4:82424795:G:C	rs184799779	G	C	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr4	82479859	82479860	chr4:82479860:C:A	rs150250755	C	A	C	Sox2_MA0143.3	12	0	+	0	0	.
chr4	82519301	82519302	chr4:82519302:G:A	rs79721053	G	A	G	Sox2_MA0143.3	23	0	-	0	0	.
chr4	82621040	82621041	chr4:82621041:C:G	rs11947120	C	G	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr4	82679793	82679794	chr4:82679794:A:T	rs17006107	A	T	A	Sox2_MA0143.3	21	0	-	0	0	.
chr4	82731124	82731125	chr4:82731125:C:T	rs1377447474	C	T	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr4	82748220	82748221	chr4:82748221:C:T	rs62311828	C	T	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr4	82769242	82769243	chr4:82769243:C:G	rs78868620	C	G	C	Sox2_MA0143.3	10	0	+	0	0	.
chr4	82782077	82782078	chr4:82782078:G:C	rs11729295	G	C	G	Sox2_MA0143.3	1	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr4	82785782	82785783	chr4:82785783:G:T	rs145382402	G	T	T	Sox2_MA0143.3	-3	0	-	0	0	.
chr4	82798965	82798966	chr4:82798966:G:T	rs112192817	G	T	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr4	82798970	82798971	chr4:82798971:C:G	rs1004245159	C	G	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr4	82798982	82798983	chr4:82798983:T:C	rs898651163	T	C	T	Sox2_MA0143.3	-19	0	-	0	0	.
chr4	82844205	82844206	chr4:82844206:T:G	chr4:82844206:T:G	T	G	T	Sox2_MA0143.3	-11	0	-	0	0	.
chr4	83171853	83171854	chr4:83171854:A:G	rs116348335	A	G	A	Sox2_MA0143.3	-10	0	-	0	0	.
chr4	83174520	83174521	chr4:83174521:G:A	rs116429138	G	A	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr4	83231776	83231777	chr4:83231777:G:A	chr4:83231777:G:A	G	A	G	Sox2_MA0143.3	10	0	+	0	0	.
chr4	83257917	83257918	chr4:83257918:G:A	rs7667017	G	A	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr4	83285519	83285520	chr4:83285520:C:T	rs74580698	C	T	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr4	83357837	83357838	chr4:83357838:G:A	rs146359654	G	A	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr4	83546697	83546698	chr4:83546698:C:T	rs10011104	C	T	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr4	83546709	83546710	chr4:83546710:A:G	rs10022623	A	G	A	Sox2_MA0143.3	-15	0	-	0	0	.
chr4	83618355	83618356	chr4:83618356:G:T	rs75479078	G	T	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr4	83658745	83658746	chr4:83658746:C:T	rs6535492	C	T	T	Sox2_MA0143.3	-10	0	-	0	0	.
chr4	83905745	83905746	chr4:83905746:A:C	rs4693657	A	C	A	Sox2_MA0143.3	6	1	-	8.676919043985553	1.7681642646703326	CCATTGTG
chr4	83920096	83920097	chr4:83920097:T:G	rs17007739	T	G	T	Sox2_MA0143.3	-14	0	-	0	0	.
chr4	84051250	84051251	chr4:84051251:G:A	rs72660830	G	A	A	Sox2_MA0143.3	-5	0	+	0	0	.
chr4	84051282	84051283	chr4:84051283:C:T	rs72660831	C	T	T	Sox2_MA0143.3	27	0	+	0	0	.
chr4	84547528	84547529	chr4:84547529:A:G	rs1373668	A	G	G	Sox2_MA0143.3	22	0	-	0	0	.
chr4	84573736	84573737	chr4:84573737:A:G	rs111242849	A	G	A	Sox2_MA0143.3	-3	0	-	0	0	.
chr4	84658421	84658422	chr4:84658422:A:C	rs10019164	A	C	T	Sox2_MA0143.3	-3	0	+	0	0	.
chr4	84673497	84673498	chr4:84673498:G:T	rs17376461	G	T	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr4	84848702	84848703	chr4:84848703:A:G	rs17009317	A	G	A	Sox2_MA0143.3	13	0	-	0	0	.
chr4	84852249	84852250	chr4:84852250:C:T	rs116069128	C	T	C	Sox2_MA0143.3	5	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr4	84852270	84852271	chr4:84852271:G:A	rs1017414076	G	A	G	Sox2_MA0143.3	-16	0	-	0	0	.
chr4	85153228	85153229	chr4:85153229:C:T	rs78551591	C	T	C	Sox2_MA0143.3	15	0	-	0	0	.
chr4	85169533	85169534	chr4:85169534:G:A	rs7675311	G	A	A	Sox2_MA0143.3	16	0	-	0	0	.
chr4	85340503	85340504	chr4:85340504:A:G	rs421511	A	G	A	Sox2_MA0143.3	21	0	-	0	0	.
chr4	85576059	85576060	chr4:85576060:G:C	chr4:85576060:G:C	G	C	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr4	85702219	85702220	chr4:85702220:G:A	rs1110777	G	A	A	Sox2_MA0143.3	-15	0	-	0	0	.
chr4	85833213	85833214	chr4:85833214:C:T	rs74363751	C	T	C	Sox2_MA0143.3	17	0	-	0	0	.
chr4	85869286	85869287	chr4:85869287:G:A	rs182804655	G	A	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr4	85900734	85900735	chr4:85900735:G:A	rs12645494	G	A	A	Sox2_MA0143.3	18	0	-	0	0	.
chr4	85956708	85956709	chr4:85956709:T:C	rs116690080	T	C	T	Sox2_MA0143.3	-9	0	-	0	0	.
chr4	86185842	86185843	chr4:86185843:T:C	rs74697909	T	C	T	Sox2_MA0143.3	2	1	-	9.019595766176417	2.900948058900136	CCATTGTC
chr4	86250095	86250096	chr4:86250096:T:C	rs6817452	T	C	C	Sox2_MA0143.3	18	0	+	0	0	.
chr4	86357942	86357943	chr4:86357943:C:T	rs2869433	C	T	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr4	86453422	86453423	chr4:86453423:G:A	rs72663991	G	A	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr4	86483519	86483520	chr4:86483520:C:G	rs4693772	C	G	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr4	86537093	86537094	chr4:86537094:A:C	rs56164000	A	C	C	Sox2_MA0143.3	10	0	-	0	0	.
chr4	86754604	86754605	chr4:86754605:T:C	rs13113689	T	C	T	Sox2_MA0143.3	-17	0	-	0	0	.
chr4	86831196	86831197	chr4:86831197:A:C	rs10049763	A	C	A	Sox2_MA0143.3	3	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr4	86878777	86878778	chr4:86878778:A:G	rs28716151	A	G	G	Sox2_MA0143.3	25	0	-	0	0	.
chr4	87002005	87002006	chr4:87002006:A:C	rs888124228	A	C	A	Sox2_MA0143.3	-13	0	+	0	0	.
chr4	87009272	87009273	chr4:87009273:C:T	rs72667750	C	T	C	Sox2_MA0143.3	7	1	-	8.864090315184848	3.5547341015215945	CCTTTGTG
chr4	87038695	87038696	chr4:87038696:A:T	rs17012281	A	T	A	Sox2_MA0143.3	7	1	+	3.5547341015215945	9.800647049772198	CCTTTGTA
chr4	87042168	87042169	chr4:87042169:A:G	rs35182728	A	G	A	Sox2_MA0143.3	-8	0	-	0	0	.
chr4	87067709	87067710	chr4:87067710:A:G	rs2280954	A	G	A	Sox2_MA0143.3	13	0	+	0	0	.
chr4	87116567	87116568	chr4:87116568:T:G	rs555659714	T	G	T	Sox2_MA0143.3	-11	0	-	0	0	.
chr4	87121098	87121099	chr4:87121099:C:T	rs3755980	C	T	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr4	87268716	87268717	chr4:87268717:C:G	rs10028866	C	G	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr4	87811539	87811540	chr4:87811540:G:A	rs1054627	G	A	G	Sox2_MA0143.3	9	0	-	0	0	.
chr4	87811765	87811766	chr4:87811766:A:T	rs1054629	A	T	A	Sox2_MA0143.3	11	0	-	0	0	.
chr4	87839260	87839261	chr4:87839261:A:G	rs4466013	A	G	A	Sox2_MA0143.3	-3	0	-	0	0	.
chr4	87896210	87896211	chr4:87896211:G:A	rs57660351	G	A	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr4	87957351	87957352	chr4:87957352:T:C	rs17013600	T	C	T	Sox2_MA0143.3	-17	0	-	0	0	.
chr4	88008768	88008769	chr4:88008769:C:T	rs76339981	C	T	T	Sox2_MA0143.3	-4	0	+	0	0	.
chr4	88262853	88262854	chr4:88262854:C:G	rs77965104	C	G	C	Sox2_MA0143.3	22	0	-	0	0	.
chr4	88285446	88285447	chr4:88285447:A:G	rs78309735	A	G	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr4	88307775	88307776	chr4:88307776:G:A	rs6841731	G	A	A	Sox2_MA0143.3	13	0	-	0	0	.
chr4	88334030	88334031	chr4:88334031:A:T	rs77348821	A	T	A	Sox2_MA0143.3	23	0	-	0	0	.
chr4	88348323	88348324	chr4:88348324:C:G	rs2196937	C	G	C	Sox2_MA0143.3	11	0	-	0	0	.
chr4	88366556	88366557	chr4:88366557:G:A	rs12651141	G	A	A	Sox2_MA0143.3	-18	0	-	0	0	.
chr4	88533601	88533602	chr4:88533602:C:T	rs145608995	C	T	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr4	88582739	88582740	chr4:88582740:G:A	rs11732343	G	A	A	Sox2_MA0143.3	9	0	+	0	0	.
chr4	88758469	88758470	chr4:88758470:T:C	rs6830226	T	C	T	Sox2_MA0143.3	27	0	-	0	0	.
chr4	88758496	88758497	chr4:88758497:G:A	rs1452904	G	A	A	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr4	88761037	88761038	chr4:88761038:T:C	rs78114325	T	C	T	Sox2_MA0143.3	14	0	-	0	0	.
chr4	88939691	88939692	chr4:88939692:G:A	rs2464522	G	A	A	Sox2_MA0143.3	11	0	-	0	0	.
chr4	88939695	88939696	chr4:88939696:C:T	rs2464523	C	T	T	Sox2_MA0143.3	7	1	-	8.676919043985553	3.3675628303222993	CCATTGTG
chr4	88968252	88968253	chr4:88968253:T:A	rs2446306	T	A	T	Sox2_MA0143.3	-4	0	-	0	0	.
chr4	88991553	88991554	chr4:88991554:A:C	rs11097207	A	C	C	Sox2_MA0143.3	21	0	-	0	0	.
chr4	88991554	88991555	chr4:88991555:A:G	rs12645240	A	G	G	Sox2_MA0143.3	20	0	-	0	0	.
chr4	89047138	89047139	chr4:89047139:G:C	rs2670629	G	C	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr4	89108437	89108438	chr4:89108438:T:C	rs2037035	T	C	C	Sox2_MA0143.3	22	0	-	0	0	.
chr4	89108463	89108464	chr4:89108464:A:G	rs4634189	A	G	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr4	89108521	89108522	chr4:89108522:T:C	rs6854285	T	C	C	Sox2_MA0143.3	24	0	-	0	0	.
chr4	89124084	89124085	chr4:89124085:C:T	rs9994655	C	T	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr4	89167271	89167272	chr4:89167272:A:G	rs62304664	A	G	A	Sox2_MA0143.3	-1	0	-	0	0	.
chr4	89196119	89196120	chr4:89196120:A:G	rs79757761	A	G	A	Sox2_MA0143.3	13	0	-	0	0	.
chr4	89196996	89196997	chr4:89196997:T:A	rs62304702	T	A	A	Sox2_MA0143.3	23	0	+	0	0	.
chr4	89211616	89211617	chr4:89211617:T:A	rs579195	T	A	A	Sox2_MA0143.3	2	1	+	8.864090315184848	8.676919043985553	CCTTTGTG
chr4	89221477	89221478	chr4:89221478:G:T	rs10031664	G	T	T	Sox2_MA0143.3	27	0	-	0	0	.
chr4	89222293	89222294	chr4:89222294:G:A	rs17015197	G	A	G	Sox2_MA0143.3	8	0	-	0	0	.
chr4	89244538	89244539	chr4:89244539:G:A	rs872612	G	A	G	Sox2_MA0143.3	1	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr4	89263182	89263183	chr4:89263183:G:A	rs13141296	G	A	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr4	89295595	89295596	chr4:89295596:T:G	rs7687888	T	G	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr4	89366070	89366071	chr4:89366071:C:T	rs61226560	C	T	c	Sox2_MA0143.3	-7	0	-	0	0	.
chr4	89486281	89486282	chr4:89486282:T:G	rs187638959	T	G	T	Sox2_MA0143.3	-14	0	-	0	0	.
chr4	89488827	89488828	chr4:89488828:T:C	rs6830052	T	C	C	Sox2_MA0143.3	-20	0	-	0	0	.
chr4	89572285	89572286	chr4:89572286:A:G	rs66539107	A	G	A	Sox2_MA0143.3	-4	0	+	0	0	.
chr4	89679464	89679465	chr4:89679465:T:C	rs566531409	T	C	T	Sox2_MA0143.3	6	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr4	89738183	89738184	chr4:89738184:A:T	rs78504001	A	T	A	Sox2_MA0143.3	-3	0	-	0	0	.
chr4	89755408	89755409	chr4:89755409:G:C	rs11933323	G	C	G	Sox2_MA0143.3	0	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr4	89765967	89765968	chr4:89765968:G:A	rs3775427	G	A	G	Sox2_MA0143.3	23	0	-	0	0	.
chr4	89765982	89765983	chr4:89765983:C:A	rs58877857	C	A	C	Sox2_MA0143.3	8	0	-	0	0	.
chr4	89800408	89800409	chr4:89800409:A:G	rs2737024	A	G	A	Sox2_MA0143.3	26	0	+	0	0	.
chr4	89800485	89800486	chr4:89800486:C:G	rs2583959	C	G	C	Sox2_MA0143.3	16	0	+	0	0	.
chr4	89901985	89901986	chr4:89901986:C:T	rs145822161	C	T	T	Sox2_MA0143.3	-10	0	+	0	0	.
chr4	89914074	89914075	chr4:89914075:T:C	rs76707913	T	C	T	Sox2_MA0143.3	-3	0	+	0	0	.
chr4	89955075	89955076	chr4:89955076:G:A	rs182472734	G	A	G	Sox2_MA0143.3	13	0	-	0	0	.
chr4	89955087	89955088	chr4:89955088:G:T	rs1479427	G	T	T	Sox2_MA0143.3	1	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr4	89955099	89955100	chr4:89955100:C:A	rs1474936660	C	A	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr4	90122536	90122537	chr4:90122537:C:G	rs74502406	C	G	C	Sox2_MA0143.3	0	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr4	90122539	90122540	chr4:90122540:T:C	rs151281108	T	C	T	Sox2_MA0143.3	3	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr4	90538158	90538159	chr4:90538159:A:G	chr4:90538159:A:G	A	G	A	Sox2_MA0143.3	-19	0	+	0	0	.
chr4	90728161	90728162	chr4:90728162:A:G	rs79121404	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr4	90792349	90792350	chr4:90792350:T:C	rs17017583	T	C	T	Sox2_MA0143.3	-13	0	+	0	0	.
chr4	90917524	90917525	chr4:90917525:G:C	rs6811626	G	C	G	Sox2_MA0143.3	19	0	+	0	0	.
chr4	91008982	91008983	chr4:91008983:C:T	rs10433882	C	T	c	Sox2_MA0143.3	27	0	-	0	0	.
chr4	91012428	91012429	chr4:91012429:G:A	rs6811256	G	A	g	Sox2_MA0143.3	13	0	-	0	0	.
chr4	91031335	91031336	chr4:91031336:T:C	rs35129590	T	C	T	Sox2_MA0143.3	21	0	+	0	0	.
chr4	91088947	91088948	chr4:91088948:G:A	rs7658597	G	A	A	Sox2_MA0143.3	26	0	+	0	0	.
chr4	91280261	91280262	chr4:91280262:T:C	rs72877068	T	C	T	Sox2_MA0143.3	2	1	-	9.613475778572903	3.494828071296623	CCATTGTT
chr4	91612073	91612074	chr4:91612074:T:C	rs35531607	T	C	T	Sox2_MA0143.3	-9	0	-	0	0	.
chr4	92013678	92013679	chr4:92013679:G:T	rs529535202	G	T	G	Sox2_MA0143.3	1	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr4	92204244	92204245	chr4:92204245:A:C	rs34452080	A	C	C	Sox2_MA0143.3	26	0	+	0	0	.
chr4	92277693	92277694	chr4:92277694:A:G	rs8180202	A	G	A	Sox2_MA0143.3	18	0	-	0	0	.
chr4	92277694	92277695	chr4:92277695:C:T	rs141391844	C	T	C	Sox2_MA0143.3	17	0	-	0	0	.
chr4	92367489	92367490	chr4:92367490:G:A	rs7685835	G	A	A	Sox2_MA0143.3	25	0	-	0	0	.
chr4	92520842	92520843	chr4:92520843:A:T	rs72661929	A	T	A	Sox2_MA0143.3	7	1	+	3.5547341015215945	9.800647049772198	CCTTTGTA
chr4	92538474	92538475	chr4:92538475:A:C	rs13108903	A	C	A	Sox2_MA0143.3	-3	0	-	0	0	.
chr4	92538491	92538492	chr4:92538492:G:T	rs7688395	G	T	T	Sox2_MA0143.3	-20	0	-	0	0	.
chr4	92987404	92987405	chr4:92987405:G:A	rs548245581	G	A	G	Sox2_MA0143.3	-3	0	+	0	0	.
chr4	93472646	93472647	chr4:93472647:A:G	rs114638901	A	G	A	Sox2_MA0143.3	4	1	-	9.800647049772198	2.8918922704569785	CCTTTGTT
chr4	93472658	93472659	chr4:93472659:T:G	rs28624162	T	G	T	Sox2_MA0143.3	-8	0	-	0	0	.
chr4	93807928	93807929	chr4:93807929:G:A	rs6857138	G	A	G	Sox2_MA0143.3	10	0	-	0	0	.
chr4	93882235	93882236	chr4:93882236:T:G	rs7692103	T	G	T	Sox2_MA0143.3	20	0	+	0	0	.
chr4	93897735	93897736	chr4:93897736:A:G	rs1463169379	A	G	A	Sox2_MA0143.3	2	1	-	3.5547341015215945	-2.751084876953981	CCTTTGTA
chr4	94207464	94207465	chr4:94207465:T:C	rs530538149	T	C	T	Sox2_MA0143.3	15	0	-	0	0	.
chr4	94207473	94207474	chr4:94207474:A:T	rs570807863	A	T	A	Sox2_MA0143.3	6	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr4	94207694	94207695	chr4:94207695:T:A	rs114036478	T	A	T	Sox2_MA0143.3	-9	0	+	0	0	.
chr4	94328134	94328135	chr4:94328135:C:T	rs11097413	C	T	C	Sox2_MA0143.3	15	0	-	0	0	.
chr4	94413498	94413499	chr4:94413499:G:A	rs12651347	G	A	G	Sox2_MA0143.3	5	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr4	94627185	94627186	chr4:94627186:G:C	rs575459362	G	C	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr4	94675130	94675131	chr4:94675131:C:A	rs143532780	C	A	C	Sox2_MA0143.3	9	0	-	0	0	.
chr4	94692781	94692782	chr4:94692782:T:C	rs4699582	T	C	C	Sox2_MA0143.3	26	0	+	0	0	.
chr4	94714808	94714809	chr4:94714809:T:C	rs11934616	T	C	T	Sox2_MA0143.3	18	0	-	0	0	.
chr4	95012565	95012566	chr4:95012566:G:A	rs1373647	G	A	A	Sox2_MA0143.3	17	0	+	0	0	.
chr4	95180986	95180987	chr4:95180987:C:T	rs17023127	C	T	C	Sox2_MA0143.3	14	0	+	0	0	.
chr4	95205054	95205055	chr4:95205055:C:T	rs3775051	C	T	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr4	95355560	95355561	chr4:95355561:C:T	rs2626072	C	T	c	Sox2_MA0143.3	-13	0	-	0	0	.
chr4	95382856	95382857	chr4:95382857:T:C	rs10461127	T	C	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr4	95382887	95382888	chr4:95382888:G:A	rs10461128	G	A	A	Sox2_MA0143.3	27	0	+	0	0	.
chr4	95414335	95414336	chr4:95414336:C:T	rs17023788	C	T	C	Sox2_MA0143.3	12	0	-	0	0	.
chr4	95417681	95417682	chr4:95417682:G:A	rs1384863	G	A	G	Sox2_MA0143.3	16	0	-	0	0	.
chr4	95417689	95417690	chr4:95417690:G:A	rs77438170	G	A	G	Sox2_MA0143.3	8	0	-	0	0	.
chr4	95457480	95457481	chr4:95457481:G:C	rs6532557	G	C	G	Sox2_MA0143.3	19	0	+	0	0	.
chr4	95507244	95507245	chr4:95507245:G:T	rs78301877	G	T	G	Sox2_MA0143.3	0	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr4	95610287	95610288	chr4:95610288:T:C	rs116570885	T	C	T	Sox2_MA0143.3	-8	0	-	0	0	.
chr4	95705798	95705799	chr4:95705799:G:A	rs72884057	G	A	G	Sox2_MA0143.3	8	0	-	0	0	.
chr4	95732210	95732211	chr4:95732211:C:T	rs879311	C	T	T	Sox2_MA0143.3	10	0	-	0	0	.
chr4	95763499	95763500	chr4:95763500:C:G	rs6811278	C	G	G	Sox2_MA0143.3	-3	0	-	0	0	.
chr4	95771848	95771849	chr4:95771849:G:A	rs13144530	G	A	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr4	95771855	95771856	chr4:95771856:G:C	rs61248685	G	C	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr4	95975146	95975147	chr4:95975147:C:T	rs62305867	C	T	C	Sox2_MA0143.3	5	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr4	96170187	96170188	chr4:96170188:G:A	rs72684745	G	A	G	Sox2_MA0143.3	0	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr4	96691384	96691385	chr4:96691385:A:G	rs79812687	A	G	A	Sox2_MA0143.3	22	0	+	0	0	.
chr4	96989295	96989296	chr4:96989296:G:A	rs76529271	G	A	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr4	96993886	96993887	chr4:96993887:A:G	rs72674065	A	G	A	Sox2_MA0143.3	19	0	+	0	0	.
chr4	97016996	97016997	chr4:97016997:A:G	rs2865773	A	G	G	Sox2_MA0143.3	-12	0	+	0	0	.
chr4	97235717	97235718	chr4:97235718:A:G	rs28573378	A	G	A	Sox2_MA0143.3	-3	0	-	0	0	.
chr4	97279561	97279562	chr4:97279562:G:C	rs1350972	G	C	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr4	97306223	97306224	chr4:97306224:G:T	rs13119820	G	T	T	Sox2_MA0143.3	5	1	+	9.019595766176417	2.110840986861197	CCATTGTC
chr4	97403196	97403197	chr4:97403197:C:T	rs1849357	C	T	T	Sox2_MA0143.3	-5	0	-	0	0	.
chr4	97593376	97593377	chr4:97593377:C:T	rs145288339	C	T	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr4	97811068	97811069	chr4:97811069:C:T	rs592053	C	T	T	Sox2_MA0143.3	-7	0	+	0	0	.
chr4	98158780	98158781	chr4:98158781:A:C	rs11944120	A	C	A	Sox2_MA0143.3	-13	0	-	0	0	.
chr4	98288637	98288638	chr4:98288638:C:A	rs4557264	C	A	A	Sox2_MA0143.3	-15	0	-	0	0	.
chr4	98467978	98467979	chr4:98467979:C:A	rs77556987	C	A	C	Sox2_MA0143.3	5	1	-	8.676919043985553	1.7681642646703324	CCATTGTG
chr4	98479563	98479564	chr4:98479564:A:G	rs753783888	A	G	A	Sox2_MA0143.3	16	0	+	0	0	.
chr4	98516891	98516892	chr4:98516892:T:C	rs59548155	T	C	T	Sox2_MA0143.3	12	0	+	0	0	.
chr4	98522786	98522787	chr4:98522787:G:A	rs6532740	G	A	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr4	98547519	98547520	chr4:98547520:C:G	rs59832984	C	G	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr4	98565005	98565006	chr4:98565006:G:A	rs72902280	G	A	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr4	98565127	98565128	chr4:98565128:C:T	rs78216491	C	T	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr4	98663362	98663363	chr4:98663363:G:A	rs143517155	G	A	G	Sox2_MA0143.3	13	0	+	0	0	.
chr4	99091847	99091848	chr4:99091848:T:C	rs1311619	T	C	C	Sox2_MA0143.3	20	0	-	0	0	.
chr4	99091939	99091940	chr4:99091940:C:T	rs1311620	C	T	C	Sox2_MA0143.3	19	0	+	0	0	.
chr4	99144357	99144358	chr4:99144358:T:G	rs1800759	T	G	T	Sox2_MA0143.3	-9	0	+	0	0	.
chr4	99284661	99284662	chr4:99284662:C:A	rs28364312	C	A	N	Sox2_MA0143.3	-13	0	-	0	0	.
chr4	99379095	99379096	chr4:99379096:G:T	rs116171168	G	T	G	Sox2_MA0143.3	9	0	+	0	0	.
chr4	99383582	99383583	chr4:99383583:G:A	rs284781	G	A	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr4	99405891	99405892	chr4:99405892:C:T	rs113956343	C	T	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr4	99438350	99438351	chr4:99438351:G:A	rs80249729	G	A	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr4	99457359	99457360	chr4:99457360:T:G	rs547299257	T	G	T	Sox2_MA0143.3	19	0	-	0	0	.
chr4	99563154	99563155	chr4:99563155:G:A	rs17029137	G	A	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr4	99624662	99624663	chr4:99624663:C:T	rs7693865	C	T	T	Sox2_MA0143.3	19	0	+	0	0	.
chr4	99631315	99631316	chr4:99631316:T:C	rs80085001	T	C	C	Sox2_MA0143.3	26	0	+	0	0	.
chr4	99654240	99654241	chr4:99654241:C:T	rs17029269	C	T	C	Sox2_MA0143.3	18	0	-	0	0	.
chr4	99774654	99774655	chr4:99774655:C:T	rs10002889	C	T	c	Sox2_MA0143.3	-8	0	-	0	0	.
chr4	99856167	99856168	chr4:99856168:C:A	rs143178306	C	A	C	Sox2_MA0143.3	5	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr4	99991857	99991858	chr4:99991858:A:C	rs4463078	A	C	A	Sox2_MA0143.3	-6	0	+	0	0	.
chr4	100094282	100094283	chr4:100094283:A:G	rs6840267	A	G	G	Sox2_MA0143.3	6	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr4	100196247	100196248	chr4:100196248:A:C	rs148692606	A	C	A	Sox2_MA0143.3	6	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr4	100296156	100296157	chr4:100296157:G:C	rs13113470	G	C	C	Sox2_MA0143.3	19	0	-	0	0	.
chr4	100343323	100343324	chr4:100343324:A:G	rs12650985	A	G	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr4	100414951	100414952	chr4:100414952:G:C	rs11097718	G	C	G	Sox2_MA0143.3	17	0	+	0	0	.
chr4	100515043	100515044	chr4:100515044:A:G	rs1318710	A	G	A	Sox2_MA0143.3	13	0	-	0	0	.
chr4	100539801	100539802	chr4:100539802:A:G	rs11097723	A	G	A	Sox2_MA0143.3	3	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr4	100542513	100542514	chr4:100542514:C:T	rs11935773	C	T	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr4	100576830	100576831	chr4:100576831:A:C	rs2651587	A	C	A	Sox2_MA0143.3	-10	0	-	0	0	.
chr4	100596694	100596695	chr4:100596695:A:G	rs12163798	A	G	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr4	100618407	100618408	chr4:100618408:A:G	rs67843227	A	G	G	Sox2_MA0143.3	26	0	-	0	0	.
chr4	100635146	100635147	chr4:100635147:A:G	rs10856956	A	G	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr4	100657358	100657359	chr4:100657359:G:A	rs79914065	G	A	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr4	100802798	100802799	chr4:100802799:T:C	rs12508644	T	C	C	Sox2_MA0143.3	13	0	+	0	0	.
chr4	101020150	101020151	chr4:101020151:A:G	chr4:101020151:A:G	A	G	A	Sox2_MA0143.3	3	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr4	101034090	101034091	chr4:101034091:G:A	rs72681029	G	A	G	Sox2_MA0143.3	27	0	-	0	0	.
chr4	101061071	101061072	chr4:101061072:G:C	rs74569968	G	C	G	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr4	101161105	101161106	chr4:101161106:C:T	rs2659552	C	T	T	Sox2_MA0143.3	11	0	+	0	0	.
chr4	101174657	101174658	chr4:101174658:C:T	rs7676124	C	T	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr4	101199132	101199133	chr4:101199133:A:G	rs3811063	A	G	A	Sox2_MA0143.3	23	0	-	0	0	.
chr4	101222458	101222459	chr4:101222459:A:G	rs3804381	A	G	A	Sox2_MA0143.3	23	0	+	0	0	.
chr4	101260140	101260141	chr4:101260141:G:C	rs902006508	G	C	G	Sox2_MA0143.3	22	0	-	0	0	.
chr4	101260170	101260171	chr4:101260171:T:C	rs17184232	T	C	T	Sox2_MA0143.3	-8	0	-	0	0	.
chr4	101404039	101404040	chr4:101404040:G:A	rs149829170	G	A	G	Sox2_MA0143.3	0	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr4	101527484	101527485	chr4:101527485:T:C	rs58254950	T	C	T	Sox2_MA0143.3	-12	0	+	0	0	.
chr4	101527496	101527497	chr4:101527497:C:T	rs190488487	C	T	C	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr4	101554278	101554279	chr4:101554279:G:T	rs10021222	G	T	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr4	101604892	101604893	chr4:101604893:C:T	rs72924589	C	T	c	Sox2_MA0143.3	19	0	-	0	0	.
chr4	101604908	101604909	chr4:101604909:A:C	rs72924590	A	C	C	Sox2_MA0143.3	3	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr4	101701685	101701686	chr4:101701686:T:C	rs10030362	T	C	T	Sox2_MA0143.3	16	0	+	0	0	.
chr4	101835907	101835908	chr4:101835908:G:A	rs7682827	G	A	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr4	101855248	101855249	chr4:101855249:T:G	rs13145804	T	G	T	Sox2_MA0143.3	27	0	+	0	0	.
chr4	101866265	101866266	chr4:101866266:G:T	rs4698977	G	T	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr4	102254134	102254135	chr4:102254135:T:C	rs149268	T	C	C	Sox2_MA0143.3	3	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr4	102344918	102344919	chr4:102344919:A:T	chr4:102344919:A:T	A	T	A	Sox2_MA0143.3	17	0	-	0	0	.
chr4	102511985	102511986	chr4:102511986:G:A	rs72696130	G	A	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr4	102529009	102529010	chr4:102529010:T:A	rs230532	T	A	A	Sox2_MA0143.3	2	1	+	9.206767037375712	9.019595766176417	CCTTTGTC
chr4	102536260	102536261	chr4:102536261:T:C	rs230529	T	C	T	Sox2_MA0143.3	11	0	-	0	0	.
chr4	102555408	102555409	chr4:102555409:C:T	rs7340881	C	T	C	Sox2_MA0143.3	8	0	+	0	0	.
chr4	102565375	102565376	chr4:102565376:G:A	rs555852511	G	A	G	Sox2_MA0143.3	8	0	+	0	0	.
chr4	102624980	102624981	chr4:102624981:T:C	rs62327181	T	C	T	Sox2_MA0143.3	-12	0	+	0	0	.
chr4	102760433	102760434	chr4:102760434:C:A	rs190932903	C	A	C	Sox2_MA0143.3	27	0	+	0	0	.
chr4	103020268	103020269	chr4:103020269:C:T	rs113738337	C	T	C	Sox2_MA0143.3	25	0	+	0	0	.
chr4	103099842	103099843	chr4:103099843:C:G	rs771691539	C	G	C	Sox2_MA0143.3	0	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr4	103197065	103197066	chr4:103197066:C:T	rs6837114	C	T	C	Sox2_MA0143.3	26	0	-	0	0	.
chr4	103306654	103306655	chr4:103306655:G:A	rs11943159	G	A	G	Sox2_MA0143.3	-2	0	+	0	0	.
chr4	103361890	103361891	chr4:103361891:C:T	rs55972036	C	T	C	Sox2_MA0143.3	25	0	+	0	0	.
chr4	103397593	103397594	chr4:103397594:T:C	rs13123693	T	C	T	Sox2_MA0143.3	7	1	-	3.5547341015215945	8.864090315184848	CCTTTGTA
chr4	103431524	103431525	chr4:103431525:A:C	rs78769732	A	C	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr4	103493730	103493731	chr4:103493731:C:G	rs9999400	C	G	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr4	103852457	103852458	chr4:103852458:T:C	rs76528190	T	C	.	Sox2_MA0143.3	20	0	-	0	0	.
chr4	103895768	103895769	chr4:103895769:A:G	rs6533114	A	G	.	Sox2_MA0143.3	-5	0	-	0	0	.
chr4	104361512	104361513	chr4:104361513:A:G	rs9307294	A	G	G	Sox2_MA0143.3	-9	0	+	0	0	.
chr4	104906197	104906198	chr4:104906198:G:A	rs62329754	G	A	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr4	104938843	104938844	chr4:104938844:A:G	rs10032763	A	G	A	Sox2_MA0143.3	13	0	-	0	0	.
chr4	104991135	104991136	chr4:104991136:A:G	rs11097876	A	G	A	Sox2_MA0143.3	2	1	-	3.5547341015215945	-2.751084876953981	CCTTTGTA
chr4	105061526	105061527	chr4:105061527:C:T	rs192117019	C	T	C	Sox2_MA0143.3	17	0	+	0	0	.
chr4	105184973	105184974	chr4:105184974:G:C	rs10010281	G	C	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr4	105196631	105196632	chr4:105196632:C:G	rs150169504	C	G	C	Sox2_MA0143.3	16	0	+	0	0	.
chr4	105207602	105207603	chr4:105207603:G:A	rs1391441	G	A	A	Sox2_MA0143.3	-3	0	-	0	0	.
chr4	105473149	105473150	chr4:105473150:G:C	rs377346197	G	C	G	Sox2_MA0143.3	9	0	-	0	0	.
chr4	105619198	105619199	chr4:105619199:G:A	rs551700607	G	A	G	Sox2_MA0143.3	24	0	+	0	0	.
chr4	105627648	105627649	chr4:105627649:G:A	rs144719220	G	A	G	Sox2_MA0143.3	-11	0	+	0	0	.
chr4	105708736	105708737	chr4:105708737:C:A	rs183694290	C	A	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr4	105708737	105708738	chr4:105708738:A:T	rs187963756	A	T	A	Sox2_MA0143.3	-8	0	-	0	0	.
chr4	105708745	105708746	chr4:105708746:C:A	rs149864959	C	A	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr4	105797440	105797441	chr4:105797441:A:T	rs77841626	A	T	A	Sox2_MA0143.3	-8	0	+	0	0	.
chr4	105967443	105967444	chr4:105967444:C:T	rs140949446	C	T	C	Sox2_MA0143.3	19	0	-	0	0	.
chr4	106021997	106021998	chr4:106021998:G:C	rs11725254	G	C	G	Sox2_MA0143.3	-3	0	+	0	0	.
chr4	106065526	106065527	chr4:106065527:A:G	rs62320120	A	G	A	Sox2_MA0143.3	-12	0	-	0	0	.
chr4	106165581	106165582	chr4:106165582:G:C	rs17273093	G	C	G	Sox2_MA0143.3	19	0	+	0	0	.
chr4	106531917	106531918	chr4:106531918:C:T	rs13147917	C	T	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr4	106556435	106556436	chr4:106556436:A:T	rs28673393	A	T	A	Sox2_MA0143.3	-17	0	+	0	0	.
chr4	107152965	107152966	chr4:107152966:G:A	rs73837828	G	A	G	Sox2_MA0143.3	11	0	-	0	0	.
chr4	107429401	107429402	chr4:107429402:G:T	rs11097955	G	T	G	Sox2_MA0143.3	0	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr4	107552440	107552441	chr4:107552441:C:T	rs74820941	C	T	C	Sox2_MA0143.3	26	0	+	0	0	.
chr4	107625208	107625209	chr4:107625209:G:A	rs190281186	G	A	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr4	107648713	107648714	chr4:107648714:T:C	rs2726658	T	C	T	Sox2_MA0143.3	21	0	-	0	0	.
chr4	107659050	107659051	chr4:107659051:C:T	rs973213	C	T	C	Sox2_MA0143.3	10	0	+	0	0	.
chr4	107756238	107756239	chr4:107756239:G:C	rs9685369	G	C	G	Sox2_MA0143.3	0	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr4	107805239	107805240	chr4:107805240:G:A	rs10033893	G	A	A	Sox2_MA0143.3	-13	0	+	0	0	.
chr4	107862602	107862603	chr4:107862603:A:T	rs7693451	A	T	A	Sox2_MA0143.3	-9	0	-	0	0	.
chr4	107967215	107967216	chr4:107967216:C:T	rs55988730	C	T	C	Sox2_MA0143.3	24	0	+	0	0	.
chr4	107991082	107991083	chr4:107991083:A:G	rs17038289	A	G	A	Sox2_MA0143.3	2	1	+	9.613475778572903	3.494828071296623	CCATTGTT
chr4	108056473	108056474	chr4:108056474:C:A	rs739728	C	A	C	Sox2_MA0143.3	21	0	-	0	0	.
chr4	108058883	108058884	chr4:108058884:C:T	rs17038514	C	T	C	Sox2_MA0143.3	21	0	-	0	0	.
chr4	108342514	108342515	chr4:108342515:G:A	rs13138626	G	A	G	Sox2_MA0143.3	26	0	-	0	0	.
chr4	108379892	108379893	chr4:108379893:T:C	rs13132148	T	C	T	Sox2_MA0143.3	6	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr4	108531554	108531555	chr4:108531555:T:G	rs77403848	T	G	T	Sox2_MA0143.3	-6	0	+	0	0	.
chr4	108560701	108560702	chr4:108560702:C:G	rs7666063	C	G	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr4	108749339	108749340	chr4:108749340:T:C	rs72895028	T	C	T	Sox2_MA0143.3	4	1	+	8.676919043985553	1.7681642646703322	CCATTGTG
chr4	108833361	108833362	chr4:108833362:C:T	rs72668318	C	T	C	Sox2_MA0143.3	7	1	+	9.206767037375712	9.800647049772198	CCTTTGTC
chr4	108893769	108893770	chr4:108893770:A:G	rs4615248	A	G	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr4	108927207	108927208	chr4:108927208:C:G	rs3851417	C	G	C	Sox2_MA0143.3	25	0	+	0	0	.
chr4	109010794	109010795	chr4:109010795:C:T	rs1405160	C	T	C	Sox2_MA0143.3	18	0	-	0	0	.
chr4	109053376	109053377	chr4:109053377:C:T	rs77116007	C	T	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr4	109096045	109096046	chr4:109096046:C:T	rs4365797	C	T	C	Sox2_MA0143.3	25	0	-	0	0	.
chr4	109274786	109274787	chr4:109274787:A:G	rs11737104	A	G	A	Sox2_MA0143.3	-10	0	-	0	0	.
chr4	109433299	109433300	chr4:109433300:G:A	rs77326245	G	A	G	Sox2_MA0143.3	27	0	+	0	0	.
chr4	109571726	109571727	chr4:109571727:T:C	rs77975057	T	C	T	Sox2_MA0143.3	4	1	+	9.206767037375712	2.2980122580604916	CCTTTGTC
chr4	109629661	109629662	chr4:109629662:C:G	rs2079131	C	G	G	Sox2_MA0143.3	26	0	-	0	0	.
chr4	109702253	109702254	chr4:109702254:C:G	rs368360161	C	G	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr4	109814661	109814662	chr4:109814662:A:G	rs4266296	A	G	.	Sox2_MA0143.3	17	0	-	0	0	.
chr4	109922566	109922567	chr4:109922567:A:G	rs547882118	A	G	A	Sox2_MA0143.3	-14	0	-	0	0	.
chr4	109925222	109925223	chr4:109925223:C:A	rs2298980	C	A	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr4	110020059	110020060	chr4:110020060:G:A	rs62325266	G	A	A	Sox2_MA0143.3	12	0	-	0	0	.
chr4	110020067	110020068	chr4:110020068:A:G	rs62325289	A	G	A	Sox2_MA0143.3	4	1	-	9.800647049772198	2.8918922704569785	CCTTTGTT
chr4	110050060	110050061	chr4:110050061:G:C	rs116534250	G	C	G	Sox2_MA0143.3	-2	0	+	0	0	.
chr4	110104731	110104732	chr4:110104732:G:T	rs11937187	G	T	G	Sox2_MA0143.3	5	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr4	110216865	110216866	chr4:110216866:T:C	rs561834576	T	C	t	Sox2_MA0143.3	-1	0	+	0	0	.
chr4	110283907	110283908	chr4:110283908:C:T	rs56388725	C	T	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr4	110315667	110315668	chr4:110315668:T:C	rs368902506	T	C	T	Sox2_MA0143.3	-11	0	+	0	0	.
chr4	110394975	110394976	chr4:110394976:A:G	rs1487263	A	G	G	Sox2_MA0143.3	23	0	+	0	0	.
chr4	110442036	110442037	chr4:110442037:T:A	rs72890253	T	A	T	Sox2_MA0143.3	-10	0	-	0	0	.
chr4	110503798	110503799	chr4:110503799:G:A	rs150325785	G	A	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr4	110961058	110961059	chr4:110961059:C:T	rs28678887	C	T	C	Sox2_MA0143.3	-5	0	-	0	0	.
chr4	111064368	111064369	chr4:111064369:A:G	rs116577291	A	G	A	Sox2_MA0143.3	8	0	+	0	0	.
chr4	111075149	111075150	chr4:111075150:G:A	rs955266602	G	A	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr4	111128437	111128438	chr4:111128438:A:C	rs756858544	A	C	A	Sox2_MA0143.3	-2	0	-	0	0	.
chr4	111153881	111153882	chr4:111153882:G:A	rs1601654	G	A	G	Sox2_MA0143.3	21	0	+	0	0	.
chr4	111989769	111989770	chr4:111989770:C:T	rs7693259	C	T	T	Sox2_MA0143.3	-10	0	+	0	0	.
chr4	111989864	111989865	chr4:111989865:A:G	rs56194651	A	G	G	Sox2_MA0143.3	-9	0	+	0	0	.
chr4	112075582	112075583	chr4:112075583:T:C	rs7686159	T	C	C	Sox2_MA0143.3	23	0	-	0	0	.
chr4	112285895	112285896	chr4:112285896:T:C	rs186973068	T	C	T	Sox2_MA0143.3	2	1	+	3.5547341015215945	-2.751084876953981	CCTTTGTA
chr4	112361645	112361646	chr4:112361646:A:G	rs2097745	A	G	G	Sox2_MA0143.3	8	0	-	0	0	.
chr4	112378989	112378990	chr4:112378990:T:A	rs115091670	T	A	T	Sox2_MA0143.3	-15	0	+	0	0	.
chr4	112378990	112378991	chr4:112378991:C:G	rs12645550	C	G	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr4	112402273	112402274	chr4:112402274:C:A	rs57590313	C	A	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr4	112402276	112402277	chr4:112402277:T:C	rs7661560	T	C	t	Sox2_MA0143.3	-16	0	+	0	0	.
chr4	112422001	112422002	chr4:112422002:A:G	rs114146480	A	G	A	Sox2_MA0143.3	13	0	+	0	0	.
chr4	112508565	112508566	chr4:112508566:G:C	rs62314725	G	C	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr4	112636574	112636575	chr4:112636575:C:A	rs117733309	C	A	C	Sox2_MA0143.3	5	1	-	9.019595766176417	2.110840986861197	CCATTGTC
chr4	112884582	112884583	chr4:112884583:A:C	rs1486489376	A	C	A	Sox2_MA0143.3	-14	0	+	0	0	.
chr4	113355749	113355750	chr4:113355750:G:A	rs141191319	G	A	G	Sox2_MA0143.3	9	0	-	0	0	.
chr4	113471100	113471101	chr4:113471101:G:A	rs916873	G	A	G	Sox2_MA0143.3	-5	0	+	0	0	.
chr4	113528499	113528500	chr4:113528500:T:G	rs74422246	T	G	T	Sox2_MA0143.3	11	0	-	0	0	.
chr4	113539629	113539630	chr4:113539630:G:T	rs17592337	G	T	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr4	113560100	113560101	chr4:113560101:G:A	rs56121365	G	A	G	Sox2_MA0143.3	16	0	-	0	0	.
chr4	113560134	113560135	chr4:113560135:T:G	rs17630328	T	G	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr4	113574968	113574969	chr4:113574969:C:G	rs13144613	C	G	C	Sox2_MA0143.3	26	0	+	0	0	.
chr4	113639544	113639545	chr4:113639545:C:A	rs60929175	C	A	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr4	113687561	113687562	chr4:113687562:A:G	rs2214457	A	G	A	Sox2_MA0143.3	3	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr4	113789570	113789571	chr4:113789571:C:T	rs9654198	C	T	T	Sox2_MA0143.3	-17	0	-	0	0	.
chr4	114015491	114015492	chr4:114015492:G:A	rs11944470	G	A	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr4	114015505	114015506	chr4:114015506:C:T	rs11944386	C	T	T	Sox2_MA0143.3	-18	0	-	0	0	.
chr4	114104865	114104866	chr4:114104866:C:T	rs7675296	C	T	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr4	114208532	114208533	chr4:114208533:G:C	rs1603616	G	C	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr4	114495802	114495803	chr4:114495803:T:C	rs2054303	T	C	T	Sox2_MA0143.3	27	0	-	0	0	.
chr4	114540108	114540109	chr4:114540109:T:C	rs1460783	T	C	T	Sox2_MA0143.3	25	0	-	0	0	.
chr4	114599580	114599581	chr4:114599581:A:G	rs143538593	A	G	A	Sox2_MA0143.3	6	1	-	9.019595766176417	2.110840986861197	CCATTGTC
chr4	114599942	114599943	chr4:114599943:C:T	rs28459461	C	T	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr4	114599948	114599949	chr4:114599949:A:C	chr4:114599949:A:C	A	C	A	Sox2_MA0143.3	-5	0	+	0	0	.
chr4	114616985	114616986	chr4:114616986:C:T	rs35182026	C	T	C	Sox2_MA0143.3	21	0	+	0	0	.
chr4	114642194	114642195	chr4:114642195:G:A	rs35271056	G	A	G	Sox2_MA0143.3	-9	0	+	0	0	.
chr4	114847037	114847038	chr4:114847038:C:T	rs72893326	C	T	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr4	114944727	114944728	chr4:114944728:A:G	rs17622816	A	G	A	Sox2_MA0143.3	-18	0	+	0	0	.
chr4	115003077	115003078	chr4:115003078:A:G	rs2620416	A	G	G	Sox2_MA0143.3	18	0	-	0	0	.
chr4	115028944	115028945	chr4:115028945:A:C	rs78847856	A	C	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr4	115143988	115143989	chr4:115143989:G:C	rs28488997	G	C	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr4	115159203	115159204	chr4:115159204:T:C	rs79339715	T	C	T	Sox2_MA0143.3	-12	0	+	0	0	.
chr4	115201455	115201456	chr4:115201456:A:C	rs6856972	A	C	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr4	115454352	115454353	chr4:115454353:G:A	rs12500378	G	A	A	Sox2_MA0143.3	-5	0	-	0	0	.
chr4	115469145	115469146	chr4:115469146:C:G	rs28630634	C	G	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr4	115489283	115489284	chr4:115489284:C:T	rs9996982	C	T	C	Sox2_MA0143.3	24	0	-	0	0	.
chr4	115526937	115526938	chr4:115526938:C:T	rs7665070	C	T	C	Sox2_MA0143.3	24	0	-	0	0	.
chr4	115844549	115844550	chr4:115844550:T:C	rs1835502	T	C	T	Sox2_MA0143.3	19	0	+	0	0	.
chr4	115864960	115864961	chr4:115864961:A:T	rs17501861	A	T	A	Sox2_MA0143.3	6	1	-	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr4	115944411	115944412	chr4:115944412:T:C	rs79242173	T	C	T	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr4	116108721	116108722	chr4:116108722:A:C	rs701788	A	C	a	Sox2_MA0143.3	3	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr4	116572153	116572154	chr4:116572154:G:T	rs12642990	G	T	T	Sox2_MA0143.3	-7	0	+	0	0	.
chr4	116596357	116596358	chr4:116596358:G:A	rs7679947	G	A	A	Sox2_MA0143.3	14	0	-	0	0	.
chr4	116606216	116606217	chr4:116606217:C:T	rs4269247	C	T	C	Sox2_MA0143.3	20	0	-	0	0	.
chr4	116606224	116606225	chr4:116606225:T:C	rs4613631	T	C	C	Sox2_MA0143.3	12	0	-	0	0	.
chr4	116926522	116926523	chr4:116926523:A:G	rs66625858	A	G	a	Sox2_MA0143.3	25	0	-	0	0	.
chr4	116980761	116980762	chr4:116980762:G:A	rs62312518	G	A	g	Sox2_MA0143.3	14	0	+	0	0	.
chr4	117113762	117113763	chr4:117113763:A:T	rs6827014	A	T	A	Sox2_MA0143.3	26	0	-	0	0	.
chr4	117376498	117376499	chr4:117376499:G:A	rs4309912	G	A	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr4	117401334	117401335	chr4:117401335:G:A	rs4501289	G	A	G	Sox2_MA0143.3	-16	0	-	0	0	.
chr4	117416616	117416617	chr4:117416617:G:A	rs73853339	G	A	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr4	117773650	117773651	chr4:117773651:C:A	rs1580230	C	A	c	Sox2_MA0143.3	23	0	-	0	0	.
chr4	117784083	117784084	chr4:117784084:G:C	rs4568305	G	C	C	Sox2_MA0143.3	5	1	+	9.206767037375712	2.298012258060492	CCTTTGTC
chr4	118027684	118027685	chr4:118027685:T:C	rs116223511	T	C	T	Sox2_MA0143.3	10	0	+	0	0	.
chr4	118112716	118112717	chr4:118112717:A:T	rs11937777	A	T	A	Sox2_MA0143.3	-12	0	-	0	0	.
chr4	118226819	118226820	chr4:118226820:A:G	rs2271577	A	G	A	Sox2_MA0143.3	18	0	-	0	0	.
chr4	118283274	118283275	chr4:118283275:C:T	chr4:118283275:C:T	C	T	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr4	118591002	118591003	chr4:118591003:T:C	rs11734153	T	C	.	Sox2_MA0143.3	-16	0	+	0	0	.
chr4	118632254	118632255	chr4:118632255:C:A	rs71610221	C	A	.	Sox2_MA0143.3	-12	0	-	0	0	.
chr4	118685744	118685745	chr4:118685745:C:T	rs73843456	C	T	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr4	118686289	118686290	chr4:118686290:A:G	rs183764723	A	G	A	Sox2_MA0143.3	2	1	+	9.019595766176417	2.900948058900136	CCATTGTC
chr4	118935877	118935878	chr4:118935878:T:G	rs13102886	T	G	T	Sox2_MA0143.3	-4	0	-	0	0	.
chr4	119046749	119046750	chr4:119046750:G:A	rs9884245	G	A	g	Sox2_MA0143.3	20	0	-	0	0	.
chr4	119091835	119091836	chr4:119091836:G:A	rs11729067	G	A	A	Sox2_MA0143.3	-1	0	+	0	0	.
chr4	119104026	119104027	chr4:119104027:T:G	rs113148931	T	G	T	Sox2_MA0143.3	-14	0	-	0	0	.
chr4	119126880	119126881	chr4:119126881:C:G	rs72673726	C	G	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr4	119140179	119140180	chr4:119140180:T:C	rs4277762	T	C	C	Sox2_MA0143.3	18	0	-	0	0	.
chr4	119149431	119149432	chr4:119149432:A:G	rs7658890	A	G	G	Sox2_MA0143.3	-2	0	+	0	0	.
chr4	119209359	119209360	chr4:119209360:T:G	chr4:119209360:T:G	T	G	T	Sox2_MA0143.3	22	0	-	0	0	.
chr4	119209372	119209373	chr4:119209373:C:T	rs6829732	C	T	C	Sox2_MA0143.3	9	0	-	0	0	.
chr4	119317918	119317919	chr4:119317919:A:G	rs10213267	A	G	a	Sox2_MA0143.3	-4	0	+	0	0	.
chr4	119330421	119330422	chr4:119330422:C:T	rs1980027	C	T	C	Sox2_MA0143.3	8	0	-	0	0	.
chr4	119352883	119352884	chr4:119352884:C:T	rs10012456	C	T	C	Sox2_MA0143.3	26	0	-	0	0	.
chr4	119454653	119454654	chr4:119454654:A:C	chr4:119454654:A:C	A	C	.	Sox2_MA0143.3	-20	0	+	0	0	.
chr4	119501582	119501583	chr4:119501583:G:A	rs35264119	G	A	.	Sox2_MA0143.3	-1	0	+	0	0	.
chr4	119627844	119627845	chr4:119627845:G:A	rs566524291	G	A	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr4	119735597	119735598	chr4:119735598:C:A	rs17296412	C	A	C	Sox2_MA0143.3	18	0	-	0	0	.
chr4	119735632	119735633	chr4:119735633:C:T	rs117725220	C	T	T	Sox2_MA0143.3	-17	0	-	0	0	.
chr4	119756269	119756270	chr4:119756270:C:A	rs2714966	C	A	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr4	119834833	119834834	chr4:119834834:C:A	rs17006546	C	A	C	Sox2_MA0143.3	24	0	-	0	0	.
chr4	119980302	119980303	chr4:119980303:C:G	rs114100823	C	G	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr4	120012028	120012029	chr4:120012029:T:C	rs73842793	T	C	T	Sox2_MA0143.3	-7	0	-	0	0	.
chr4	120139616	120139617	chr4:120139617:A:G	rs6534171	A	G	-	Sox2_MA0143.3	16	0	-	0	0	.
chr4	120448088	120448089	chr4:120448089:A:G	rs76487909	A	G	A	Sox2_MA0143.3	-3	0	-	0	0	.
chr4	120455007	120455008	chr4:120455008:C:G	rs4833641	C	G	C	Sox2_MA0143.3	18	0	+	0	0	.
chr4	120634111	120634112	chr4:120634112:A:C	rs13121457	A	C	A	Sox2_MA0143.3	10	0	+	0	0	.
chr4	120683848	120683849	chr4:120683849:G:T	rs62323055	G	T	G	Sox2_MA0143.3	27	0	-	0	0	.
chr4	120724163	120724164	chr4:120724164:A:G	rs843576	A	G	A	Sox2_MA0143.3	-12	0	-	0	0	.
chr4	120731789	120731790	chr4:120731790:C:A	rs76650962	C	A	C	Sox2_MA0143.3	11	0	-	0	0	.
chr4	120822459	120822460	chr4:120822460:T:G	rs343184	T	G	T	Sox2_MA0143.3	26	0	-	0	0	.
chr4	121057606	121057607	chr4:121057607:G:A	rs4833200	G	A	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr4	121225358	121225359	chr4:121225359:T:C	rs6845524	T	C	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr4	121501106	121501107	chr4:121501107:C:A	rs35980884	C	A	C	Sox2_MA0143.3	0	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr4	121609931	121609932	chr4:121609932:T:C	rs3811746	T	C	T	Sox2_MA0143.3	21	0	-	0	0	.
chr4	121633994	121633995	chr4:121633995:A:T	rs6833675	A	T	A	Sox2_MA0143.3	11	0	-	0	0	.
chr4	121749338	121749339	chr4:121749339:A:G	rs12647105	A	G	A	Sox2_MA0143.3	17	0	+	0	0	.
chr4	121785291	121785292	chr4:121785292:T:G	rs28665553	T	G	G	Sox2_MA0143.3	3	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr4	121819298	121819299	chr4:121819299:T:G	rs1396080	T	G	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr4	122017478	122017479	chr4:122017479:G:A	rs17643719	G	A	G	Sox2_MA0143.3	15	0	-	0	0	.
chr4	122263129	122263130	chr4:122263130:G:T	rs11731632	G	T	G	Sox2_MA0143.3	5	1	+	9.613475778572903	2.7047209992576837	CCATTGTT
chr4	122310170	122310171	chr4:122310171:A:G	rs78382273	A	G	A	Sox2_MA0143.3	14	0	+	0	0	.
chr4	122423522	122423523	chr4:122423523:A:T	rs62321757	A	T	a	Sox2_MA0143.3	20	0	-	0	0	.
chr4	122501017	122501018	chr4:122501018:A:G	rs193034134	A	G	a	Sox2_MA0143.3	2	1	+	8.676919043985553	2.5582713367092715	CCATTGTG
chr4	122507873	122507874	chr4:122507874:G:A	rs72669153	G	A	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr4	122616966	122616967	chr4:122616967:C:T	rs189356469	C	T	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr4	122617756	122617757	chr4:122617757:C:T	rs2221903	C	T	T	Sox2_MA0143.3	-15	0	-	0	0	.
chr4	122744272	122744273	chr4:122744273:G:A	rs4833843	G	A	A	Sox2_MA0143.3	-8	0	-	0	0	.
chr4	122909983	122909984	chr4:122909984:G:A	rs74525029	G	A	G	Sox2_MA0143.3	18	0	+	0	0	.
chr4	122909984	122909985	chr4:122909985:T:A	rs79171014	T	A	T	Sox2_MA0143.3	19	0	+	0	0	.
chr4	122911998	122911999	chr4:122911999:T:C	rs11098676	T	C	C	Sox2_MA0143.3	8	0	+	0	0	.
chr4	123100708	123100709	chr4:123100709:A:G	rs307032	A	G	A	Sox2_MA0143.3	12	0	-	0	0	.
chr4	123123190	123123191	chr4:123123191:G:A	rs2561152	G	A	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr4	123232414	123232415	chr4:123232415:G:A	rs303139	G	A	G	Sox2_MA0143.3	1	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr4	123326522	123326523	chr4:123326523:G:A	rs68051952	G	A	A	Sox2_MA0143.3	14	0	-	0	0	.
chr4	123346288	123346289	chr4:123346289:G:A	rs871648	G	A	A	Sox2_MA0143.3	15	0	-	0	0	.
chr4	123418680	123418681	chr4:123418681:C:G	rs149501795	C	G	C	Sox2_MA0143.3	5	1	-	9.613475778572903	2.7047209992576837	CCATTGTT
chr4	123477992	123477993	chr4:123477993:G:A	rs768043090	G	A	G	Sox2_MA0143.3	16	0	-	0	0	.
chr4	123477997	123477998	chr4:123477998:T:G	rs115569232	T	G	T	Sox2_MA0143.3	11	0	-	0	0	.
chr4	123506087	123506088	chr4:123506088:G:T	rs72684699	G	T	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr4	123506120	123506121	chr4:123506121:A:G	rs28656345	A	G	G	Sox2_MA0143.3	23	0	+	0	0	.
chr4	123600244	123600245	chr4:123600245:C:T	rs76149182	C	T	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr4	123617286	123617287	chr4:123617287:T:G	chr4:123617287:T:G	T	G	t	Sox2_MA0143.3	-20	0	-	0	0	.
chr4	123699879	123699880	chr4:123699880:C:T	rs55954942	C	T	C	Sox2_MA0143.3	18	0	-	0	0	.
chr4	123787169	123787170	chr4:123787170:T:A	rs766021842	T	A	T	Sox2_MA0143.3	14	0	-	0	0	.
chr4	123841891	123841892	chr4:123841892:T:A	rs62321835	T	A	T	Sox2_MA0143.3	20	0	+	0	0	.
chr4	123954326	123954327	chr4:123954327:G:T	rs10016303	G	T	G	Sox2_MA0143.3	19	0	-	0	0	.
chr4	123986504	123986505	chr4:123986505:T:C	rs923182909	T	C	T	Sox2_MA0143.3	22	0	-	0	0	.
chr4	123996031	123996032	chr4:123996032:C:T	rs72672872	C	T	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr4	124020343	124020344	chr4:124020344:A:T	rs1040242	A	T	A	Sox2_MA0143.3	-12	0	-	0	0	.
chr4	124092738	124092739	chr4:124092739:C:A	rs1383106563	C	A	C	Sox2_MA0143.3	1	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr4	124157705	124157706	chr4:124157706:A:G	rs893558	A	G	A	Sox2_MA0143.3	-9	0	+	0	0	.
chr4	124178276	124178277	chr4:124178277:C:T	rs62319493	C	T	T	Sox2_MA0143.3	-6	0	+	0	0	.
chr4	124438250	124438251	chr4:124438251:T:C	rs72921122	T	C	T	Sox2_MA0143.3	4	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr4	124746465	124746466	chr4:124746466:T:G	rs61231754	T	G	T	Sox2_MA0143.3	-18	0	-	0	0	.
chr4	124773077	124773078	chr4:124773078:G:C	rs1827922	G	C	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr4	124860324	124860325	chr4:124860325:C:A	rs6857049	C	A	C	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr4	124904055	124904056	chr4:124904056:A:G	rs57144541	A	G	A	Sox2_MA0143.3	21	0	-	0	0	.
chr4	124905739	124905740	chr4:124905740:G:C	rs993854	G	C	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr4	124935232	124935233	chr4:124935233:C:T	rs11932360	C	T	C	Sox2_MA0143.3	22	0	-	0	0	.
chr4	124940389	124940390	chr4:124940390:A:G	rs1483592	A	G	A	Sox2_MA0143.3	22	0	+	0	0	.
chr4	124943497	124943498	chr4:124943498:T:C	rs2170743	T	C	C	Sox2_MA0143.3	3	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr4	124943516	124943517	chr4:124943517:G:A	rs2170742	G	A	A	Sox2_MA0143.3	22	0	+	0	0	.
chr4	124971028	124971029	chr4:124971029:A:G	rs12640347	A	G	G	Sox2_MA0143.3	9	0	-	0	0	.
chr4	125045051	125045052	chr4:125045052:G:A	rs2710816	G	A	A	Sox2_MA0143.3	20	0	-	0	0	.
chr4	125115620	125115621	chr4:125115621:C:T	rs7675988	C	T	C	Sox2_MA0143.3	-5	0	-	0	0	.
chr4	125278010	125278011	chr4:125278011:C:A	rs1114617	C	A	C	Sox2_MA0143.3	1	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr4	125720145	125720146	chr4:125720146:C:T	rs73847654	C	T	C	Sox2_MA0143.3	24	0	-	0	0	.
chr4	125929128	125929129	chr4:125929129:G:C	rs12503568	G	C	G	Sox2_MA0143.3	12	0	-	0	0	.
chr4	125948690	125948691	chr4:125948691:T:A	rs4605672	T	A	T	Sox2_MA0143.3	-8	0	+	0	0	.
chr4	126037549	126037550	chr4:126037550:C:T	rs7683776	C	T	T	Sox2_MA0143.3	25	0	+	0	0	.
chr4	126271896	126271897	chr4:126271897:T:C	rs62321869	T	C	T	Sox2_MA0143.3	24	0	-	0	0	.
chr4	126375518	126375519	chr4:126375519:C:T	rs75346583	C	T	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr4	126449634	126449635	chr4:126449635:G:A	rs60958358	G	A	A	Sox2_MA0143.3	5	1	+	9.206767037375712	2.298012258060492	CCTTTGTC
chr4	126635960	126635961	chr4:126635961:G:A	rs172686	G	A	A	Sox2_MA0143.3	16	0	-	0	0	.
chr4	126757351	126757352	chr4:126757352:C:G	rs4413416	C	G	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr4	126771699	126771700	chr4:126771700:C:T	rs74217469	C	T	c	Sox2_MA0143.3	-1	0	-	0	0	.
chr4	126786329	126786330	chr4:126786330:G:A	rs13111309	G	A	a	Sox2_MA0143.3	10	0	-	0	0	.
chr4	126893429	126893430	chr4:126893430:C:G	rs2391124	C	G	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr4	126898587	126898588	chr4:126898588:G:A	rs1510669	G	A	A	Sox2_MA0143.3	-1	0	-	0	0	.
chr4	127033702	127033703	chr4:127033703:G:A	rs17012011	G	A	G	Sox2_MA0143.3	9	0	+	0	0	.
chr4	127239329	127239330	chr4:127239330:T:C	rs967533	T	C	C	Sox2_MA0143.3	3	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr4	127305113	127305114	chr4:127305114:A:C	rs13108464	A	C	C	Sox2_MA0143.3	6	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr4	127530111	127530112	chr4:127530112:A:G	rs56077955	A	G	G	Sox2_MA0143.3	-14	0	+	0	0	.
chr4	127709181	127709182	chr4:127709182:A:G	rs761770193	A	G	A	Sox2_MA0143.3	13	0	-	0	0	.
chr4	127715525	127715526	chr4:127715526:C:T	rs72616936	C	T	C	Sox2_MA0143.3	1	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr4	128056740	128056741	chr4:128056741:A:G	rs72618833	A	G	a	Sox2_MA0143.3	-20	0	+	0	0	.
chr4	128227867	128227868	chr4:128227868:T:A	rs75936129	T	A	T	Sox2_MA0143.3	-7	0	+	0	0	.
chr4	128288880	128288881	chr4:128288881:T:C	chr4:128288881:T:C	T	C	T	Sox2_MA0143.3	-11	0	+	0	0	.
chr4	128385501	128385502	chr4:128385502:A:G	rs291081	A	G	A	Sox2_MA0143.3	-15	0	-	0	0	.
chr4	128393406	128393407	chr4:128393407:C:T	rs17013261	C	T	C	Sox2_MA0143.3	16	0	-	0	0	.
chr4	128483817	128483818	chr4:128483818:G:A	rs76257014	G	A	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr4	128578767	128578768	chr4:128578768:C:T	rs1216378	C	T	C	Sox2_MA0143.3	15	0	+	0	0	.
chr4	128600716	128600717	chr4:128600717:G:A	rs149386378	G	A	G	Sox2_MA0143.3	25	0	-	0	0	.
chr4	128600741	128600742	chr4:128600742:G:A	rs147507850	G	A	G	Sox2_MA0143.3	0	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr4	128608290	128608291	chr4:128608291:G:A	rs1216411	G	A	G	Sox2_MA0143.3	8	0	-	0	0	.
chr4	128638643	128638644	chr4:128638644:T:C	rs1216352	T	C	T	Sox2_MA0143.3	13	0	+	0	0	.
chr4	128649291	128649292	chr4:128649292:A:G	rs1216363	A	G	A	Sox2_MA0143.3	15	0	-	0	0	.
chr4	128688680	128688681	chr4:128688681:G:A	rs114906612	G	A	G	Sox2_MA0143.3	-5	0	+	0	0	.
chr4	128745377	128745378	chr4:128745378:G:A	rs62317510	G	A	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr4	128908089	128908090	chr4:128908090:T:C	rs318533	T	C	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr4	128908090	128908091	chr4:128908091:G:A	rs1048933856	G	A	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr4	129232390	129232391	chr4:129232391:A:G	rs13129431	A	G	A	Sox2_MA0143.3	9	0	+	0	0	.
chr4	129252088	129252089	chr4:129252089:A:G	rs4975199	A	G	G	Sox2_MA0143.3	26	0	-	0	0	.
chr4	129315072	129315073	chr4:129315073:G:T	rs10009321	G	T	T	Sox2_MA0143.3	-15	0	+	0	0	.
chr4	129315083	129315084	chr4:129315084:T:C	rs6856123	T	C	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr4	129640635	129640636	chr4:129640636:T:G	rs1602452	T	G	T	Sox2_MA0143.3	-7	0	+	0	0	.
chr4	129926659	129926660	chr4:129926660:T:C	rs4593148	T	C	T	Sox2_MA0143.3	6	1	+	9.613475778572903	2.7047209992576837	CCATTGTT
chr4	130035121	130035122	chr4:130035122:T:C	rs2135927	T	C	T	Sox2_MA0143.3	13	0	-	0	0	.
chr4	130099334	130099335	chr4:130099335:T:A	rs10017699	T	A	T	Sox2_MA0143.3	10	0	+	0	0	.
chr4	130154706	130154707	chr4:130154707:G:A	rs67052396	G	A	A	Sox2_MA0143.3	23	0	-	0	0	.
chr4	130419780	130419781	chr4:130419781:G:A	rs17478712	G	A	G	Sox2_MA0143.3	17	0	-	0	0	.
chr4	130447766	130447767	chr4:130447767:T:C	rs28895933	T	C	T	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr4	130600883	130600884	chr4:130600884:A:G	rs79645653	A	G	A	Sox2_MA0143.3	-12	0	-	0	0	.
chr4	130747907	130747908	chr4:130747908:G:C	rs17492514	G	C	-	Sox2_MA0143.3	-18	0	-	0	0	.
chr4	131182207	131182208	chr4:131182208:A:G	rs533818	A	G	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr4	131251655	131251656	chr4:131251656:G:A	rs75487560	G	A	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr4	131534952	131534953	chr4:131534953:G:A	rs188669655	G	A	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr4	131534953	131534954	chr4:131534954:G:T	rs193270037	G	T	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr4	131658756	131658757	chr4:131658757:G:A	rs1217767910	G	A	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr4	132011700	132011701	chr4:132011701:G:A	rs4863859	G	A	A	Sox2_MA0143.3	12	0	-	0	0	.
chr4	132203082	132203083	chr4:132203083:C:A	rs17484687	C	A	A	Sox2_MA0143.3	-12	0	-	0	0	.
chr4	132223285	132223286	chr4:132223286:A:G	rs75045548	A	G	A	Sox2_MA0143.3	-1	0	+	0	0	.
chr4	132223310	132223311	chr4:132223311:C:T	rs77174341	C	T	T	Sox2_MA0143.3	24	0	+	0	0	.
chr4	132284740	132284741	chr4:132284741:C:T	rs1392015	C	T	T	Sox2_MA0143.3	18	0	+	0	0	.
chr4	132548589	132548590	chr4:132548590:T:C	rs1827130	T	C	T	Sox2_MA0143.3	-16	0	-	0	0	.
chr4	132594013	132594014	chr4:132594014:A:T	rs72682559	A	T	A	Sox2_MA0143.3	17	0	-	0	0	.
chr4	132605890	132605891	chr4:132605891:C:T	rs4863878	C	T	C	Sox2_MA0143.3	10	0	+	0	0	.
chr4	133072986	133072987	chr4:133072987:C:A	rs1605533	C	A	A	Sox2_MA0143.3	9	0	-	0	0	.
chr4	133084505	133084506	chr4:133084506:T:C	rs10021597	T	C	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr4	133238009	133238010	chr4:133238010:G:A	rs78180133	G	A	G	Sox2_MA0143.3	19	0	-	0	0	.
chr4	133534496	133534497	chr4:133534497:C:A	rs1963042	C	A	C	Sox2_MA0143.3	5	1	-	8.676919043985553	1.7681642646703324	CCATTGTG
chr4	133647323	133647324	chr4:133647324:C:G	rs2246872	C	G	c	Sox2_MA0143.3	-12	0	+	0	0	.
chr4	133720286	133720287	chr4:133720287:C:T	rs17537322	C	T	T	Sox2_MA0143.3	0	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr4	133893397	133893398	chr4:133893398:T:C	rs7693180	T	C	C	Sox2_MA0143.3	25	0	-	0	0	.
chr4	134216215	134216216	chr4:134216216:A:G	rs72944891	A	G	A	Sox2_MA0143.3	-15	0	+	0	0	.
chr4	134328325	134328326	chr4:134328326:C:T	rs7658021	C	T	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr4	134383941	134383942	chr4:134383942:A:G	rs549049158	A	G	A	Sox2_MA0143.3	2	1	+	8.676919043985553	2.5582713367092715	CCATTGTG
chr4	134413263	134413264	chr4:134413264:T:C	rs17631439	T	C	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr4	134687775	134687776	chr4:134687776:G:A	rs62316577	G	A	G	Sox2_MA0143.3	0	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr4	134774056	134774057	chr4:134774057:G:T	rs629270	G	T	G	Sox2_MA0143.3	12	0	+	0	0	.
chr4	134947417	134947418	chr4:134947418:C:T	rs12499856	C	T	C	Sox2_MA0143.3	18	0	+	0	0	.
chr4	135618845	135618846	chr4:135618846:A:G	rs80103557	A	G	A	Sox2_MA0143.3	21	0	-	0	0	.
chr4	135643541	135643542	chr4:135643542:G:A	rs116706666	G	A	A	Sox2_MA0143.3	27	0	-	0	0	.
chr4	135769345	135769346	chr4:135769346:T:C	rs2174385	T	C	T	Sox2_MA0143.3	-15	0	-	0	0	.
chr4	135806147	135806148	chr4:135806148:C:A	rs12513116	C	A	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr4	135917382	135917383	chr4:135917383:A:G	rs34212741	A	G	A	Sox2_MA0143.3	8	0	-	0	0	.
chr4	136425617	136425618	chr4:136425618:A:T	rs62309697	A	T	A	Sox2_MA0143.3	-6	0	+	0	0	.
chr4	136638232	136638233	chr4:136638233:T:C	rs113522451	T	C	t	Sox2_MA0143.3	17	0	-	0	0	.
chr4	136713354	136713355	chr4:136713355:T:C	rs141576403	T	C	T	Sox2_MA0143.3	-11	0	+	0	0	.
chr4	136736115	136736116	chr4:136736116:C:T	rs17617045	C	T	C	Sox2_MA0143.3	-20	0	-	0	0	.
chr4	137310321	137310322	chr4:137310322:C:T	rs1425972	C	T	C	Sox2_MA0143.3	16	0	-	0	0	.
chr4	137325991	137325992	chr4:137325992:G:A	rs10857203	G	A	G	Sox2_MA0143.3	8	0	-	0	0	.
chr4	137330536	137330537	chr4:137330537:A:G	rs7688745	A	G	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr4	137408772	137408773	chr4:137408773:A:T	rs4864419	A	T	T	Sox2_MA0143.3	16	0	+	0	0	.
chr4	137421858	137421859	chr4:137421859:C:G	rs111478945	C	G	C	Sox2_MA0143.3	15	0	+	0	0	.
chr4	137421862	137421863	chr4:137421863:C:G	rs4403104	C	G	C	Sox2_MA0143.3	19	0	+	0	0	.
chr4	137466178	137466179	chr4:137466179:C:T	rs62332261	C	T	c	Sox2_MA0143.3	-6	0	-	0	0	.
chr4	137588098	137588099	chr4:137588099:A:G	rs115220081	A	G	A	Sox2_MA0143.3	2	1	+	9.613475778572903	3.494828071296623	CCATTGTT
chr4	137892610	137892611	chr4:137892611:T:C	rs142651281	T	C	T	Sox2_MA0143.3	2	1	+	8.864090315184848	2.5582713367092715	CCTTTGTG
chr4	137960558	137960559	chr4:137960559:G:A	rs17050054	G	A	G	Sox2_MA0143.3	26	0	-	0	0	.
chr4	138111195	138111196	chr4:138111196:A:G	rs76900429	A	G	A	Sox2_MA0143.3	23	0	-	0	0	.
chr4	138178723	138178724	chr4:138178724:T:G	rs554386065	T	G	T	Sox2_MA0143.3	-6	0	+	0	0	.
chr4	138178731	138178732	chr4:138178732:A:G	rs915288267	A	G	A	Sox2_MA0143.3	2	1	+	9.613475778572903	3.494828071296623	CCATTGTT
chr4	138182955	138182956	chr4:138182956:T:C	rs115001718	T	C	T	Sox2_MA0143.3	12	0	+	0	0	.
chr4	138182956	138182957	chr4:138182957:G:C	rs544450234	G	C	G	Sox2_MA0143.3	13	0	+	0	0	.
chr4	138234514	138234515	chr4:138234515:C:T	rs7670361	C	T	C	Sox2_MA0143.3	5	1	-	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr4	138248124	138248125	chr4:138248125:G:A	rs62324405	G	A	G	Sox2_MA0143.3	24	0	+	0	0	.
chr4	138309665	138309666	chr4:138309666:C:A	rs4863780	C	A	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr4	138321145	138321146	chr4:138321146:G:A	rs13103232	G	A	G	Sox2_MA0143.3	11	0	-	0	0	.
chr4	138401800	138401801	chr4:138401801:T:C	rs1365374	T	C	T	Sox2_MA0143.3	2	1	-	8.676919043985553	2.5582713367092715	CCATTGTG
chr4	138522147	138522148	chr4:138522148:A:G	rs997118748	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr4	138561803	138561804	chr4:138561804:G:T	rs7694744	G	T	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr4	138610181	138610182	chr4:138610182:A:T	rs17050544	A	T	A	Sox2_MA0143.3	24	0	-	0	0	.
chr4	138686613	138686614	chr4:138686614:A:T	rs139277772	A	T	A	Sox2_MA0143.3	6	1	-	8.676919043985553	1.7681642646703326	CCATTGTG
chr4	138686621	138686622	chr4:138686622:G:C	rs79600065	G	C	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr4	138763016	138763017	chr4:138763017:G:A	rs905996	G	A	A	Sox2_MA0143.3	-6	0	+	0	0	.
chr4	138794269	138794270	chr4:138794270:G:T	rs13125892	G	T	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr4	138898254	138898255	chr4:138898255:T:C	chr4:138898255:T:C	T	C	T	Sox2_MA0143.3	23	0	-	0	0	.
chr4	138911230	138911231	chr4:138911231:T:C	rs13152107	T	C	T	Sox2_MA0143.3	-13	0	+	0	0	.
chr4	138911260	138911261	chr4:138911261:C:A	rs373494833	C	A	C	Sox2_MA0143.3	17	0	+	0	0	.
chr4	138911260	138911261	chr4:138911261:C:T	chr4:138911261:C:T	C	T	C	Sox2_MA0143.3	17	0	+	0	0	.
chr4	138912429	138912430	chr4:138912430:A:G	rs189389853	A	G	A	Sox2_MA0143.3	-13	0	-	0	0	.
chr4	138926431	138926432	chr4:138926432:T:C	rs4241924	T	C	T	Sox2_MA0143.3	3	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr4	138978288	138978289	chr4:138978289:T:C	rs6858120	T	C	T	Sox2_MA0143.3	-9	0	+	0	0	.
chr4	138986312	138986313	chr4:138986313:C:G	rs13102992	C	G	C	Sox2_MA0143.3	18	0	+	0	0	.
chr4	139178208	139178209	chr4:139178209:T:A	chr4:139178209:T:A	T	A	T	Sox2_MA0143.3	-10	0	+	0	0	.
chr4	139222746	139222747	chr4:139222747:T:A	rs6535987	T	A	A	Sox2_MA0143.3	15	0	-	0	0	.
chr4	139511605	139511606	chr4:139511606:C:T	rs202095469	C	T	C	Sox2_MA0143.3	15	0	+	0	0	.
chr4	139528494	139528495	chr4:139528495:T:C	rs7658323	T	C	T	Sox2_MA0143.3	-5	0	+	0	0	.
chr4	139642139	139642140	chr4:139642140:A:G	rs12513100	A	G	A	Sox2_MA0143.3	27	0	-	0	0	.
chr4	139645696	139645697	chr4:139645697:A:G	rs4863666	A	G	A	Sox2_MA0143.3	-3	0	+	0	0	.
chr4	139668995	139668996	chr4:139668996:A:C	rs2602253	A	C	C	Sox2_MA0143.3	4	1	-	9.206767037375712	2.2980122580604916	CCTTTGTC
chr4	139669000	139669001	chr4:139669001:C:T	rs2646046	C	T	T	Sox2_MA0143.3	-1	0	-	0	0	.
chr4	139743443	139743444	chr4:139743444:T:G	rs67917842	T	G	T	Sox2_MA0143.3	6	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr4	139750590	139750591	chr4:139750591:A:G	rs6845848	A	G	A	Sox2_MA0143.3	-11	0	+	0	0	.
chr4	139797410	139797411	chr4:139797411:A:C	chr4:139797411:A:C	A	C	a	Sox2_MA0143.3	13	0	-	0	0	.
chr4	139823444	139823445	chr4:139823445:C:T	rs1350038	C	T	T	Sox2_MA0143.3	-1	0	-	0	0	.
chr4	139852866	139852867	chr4:139852867:T:C	rs114784248	T	C	T	Sox2_MA0143.3	25	0	+	0	0	.
chr4	139856912	139856913	chr4:139856913:A:G	rs10018246	A	G	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr4	139872291	139872292	chr4:139872292:G:T	rs79665557	G	T	G	Sox2_MA0143.3	9	0	+	0	0	.
chr4	139958954	139958955	chr4:139958955:T:C	rs769675	T	C	C	Sox2_MA0143.3	27	0	+	0	0	.
chr4	139970328	139970329	chr4:139970329:G:A	rs13434978	G	A	g	Sox2_MA0143.3	24	0	-	0	0	.
chr4	140005135	140005136	chr4:140005136:T:C	rs1510721	T	C	T	Sox2_MA0143.3	2	1	+	9.206767037375712	2.900948058900136	CCTTTGTC
chr4	140020031	140020032	chr4:140020032:A:G	rs1402670	A	G	A	Sox2_MA0143.3	-15	0	-	0	0	.
chr4	140037842	140037843	chr4:140037843:A:G	rs143953716	A	G	A	Sox2_MA0143.3	-8	0	+	0	0	.
chr4	140096775	140096776	chr4:140096776:G:C	rs948308355	G	C	G	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr4	140098720	140098721	chr4:140098721:G:T	rs35492612	G	T	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr4	140237771	140237772	chr4:140237772:A:G	rs759914777	A	G	A	Sox2_MA0143.3	27	0	+	0	0	.
chr4	140277446	140277447	chr4:140277447:G:A	rs34070717	G	A	G	Sox2_MA0143.3	5	1	+	9.613475778572903	2.7047209992576837	CCATTGTT
chr4	140427282	140427283	chr4:140427283:A:G	rs16998464	A	G	G	Sox2_MA0143.3	11	0	-	0	0	.
chr4	140466283	140466284	chr4:140466284:C:T	rs1594468	C	T	T	Sox2_MA0143.3	-20	0	-	0	0	.
chr4	140515699	140515700	chr4:140515700:C:T	rs1241046	C	T	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr4	140615413	140615414	chr4:140615414:G:A	rs562104853	G	A	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr4	140698378	140698379	chr4:140698379:C:T	rs2220343	C	T	C	Sox2_MA0143.3	24	0	-	0	0	.
chr4	140756095	140756096	chr4:140756096:G:A	rs574928419	G	A	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr4	141002834	141002835	chr4:141002835:C:T	rs10033922	C	T	C	Sox2_MA0143.3	11	0	+	0	0	.
chr4	141024771	141024772	chr4:141024772:A:G	rs13151459	A	G	A	Sox2_MA0143.3	15	0	-	0	0	.
chr4	141152078	141152079	chr4:141152079:T:G	rs1435132	T	G	T	Sox2_MA0143.3	-7	0	-	0	0	.
chr4	141208910	141208911	chr4:141208911:T:C	rs28700051	T	C	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr4	141215390	141215391	chr4:141215391:A:C	rs138320388	A	C	A	Sox2_MA0143.3	9	0	+	0	0	.
chr4	141323957	141323958	chr4:141323958:C:T	rs893705153	C	T	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr4	141415837	141415838	chr4:141415838:T:C	rs116793279	T	C	T	Sox2_MA0143.3	4	1	+	9.800647049772198	2.8918922704569785	CCTTTGTT
chr4	141442309	141442310	chr4:141442310:G:A	rs10003457	G	A	G	Sox2_MA0143.3	22	0	+	0	0	.
chr4	141567730	141567731	chr4:141567731:C:T	rs7667746	C	T	T	Sox2_MA0143.3	-17	0	-	0	0	.
chr4	141576096	141576097	chr4:141576097:G:A	rs113773850	G	A	G	Sox2_MA0143.3	23	0	+	0	0	.
chr4	141692203	141692204	chr4:141692204:T:C	rs56332929	T	C	T	Sox2_MA0143.3	20	0	-	0	0	.
chr4	141761349	141761350	chr4:141761350:G:A	rs7668411	G	A	A	Sox2_MA0143.3	-2	0	+	0	0	.
chr4	142096436	142096437	chr4:142096437:T:C	rs72718433	T	C	T	Sox2_MA0143.3	4	1	+	3.5547341015215945	-3.3540206777936254	CCTTTGTA
chr4	142096442	142096443	chr4:142096443:T:C	rs3775636	T	C	T	Sox2_MA0143.3	-16	0	+	0	0	.
chr4	142128022	142128023	chr4:142128023:C:T	rs55679069	C	T	T	Sox2_MA0143.3	-19	0	-	0	0	.
chr4	142155252	142155253	chr4:142155253:T:G	rs336391	T	G	T	Sox2_MA0143.3	-4	0	-	0	0	.
chr4	142265307	142265308	chr4:142265308:C:T	rs138379542	C	T	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr4	142265337	142265338	chr4:142265338:G:A	rs2627828	G	A	A	Sox2_MA0143.3	26	0	+	0	0	.
chr4	142297546	142297547	chr4:142297547:C:T	rs28707477	C	T	C	Sox2_MA0143.3	8	0	+	0	0	.
chr4	142308480	142308481	chr4:142308481:A:G	rs1907107	A	G	A	Sox2_MA0143.3	-13	0	-	0	0	.
chr4	142359130	142359131	chr4:142359131:A:C	rs977617	A	C	C	Sox2_MA0143.3	8	0	+	0	0	.
chr4	142384482	142384483	chr4:142384483:A:G	rs67001118	A	G	G	Sox2_MA0143.3	14	0	-	0	0	.
chr4	142414471	142414472	chr4:142414472:G:A	rs181675372	G	A	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr4	142499108	142499109	chr4:142499109:A:G	rs10011782	A	G	G	Sox2_MA0143.3	11	0	+	0	0	.
chr4	142548925	142548926	chr4:142548926:G:A	rs67078907	G	A	G	Sox2_MA0143.3	26	0	+	0	0	.
chr4	142800927	142800928	chr4:142800928:A:G	rs17016779	A	G	A	Sox2_MA0143.3	-12	0	-	0	0	.
chr4	142893157	142893158	chr4:142893158:T:C	rs4690732	T	C	T	Sox2_MA0143.3	14	0	-	0	0	.
chr4	143084211	143084212	chr4:143084212:T:C	rs78909041	T	C	T	Sox2_MA0143.3	18	0	+	0	0	.
chr4	143126892	143126893	chr4:143126893:C:T	rs4277733	C	T	T	Sox2_MA0143.3	-7	0	-	0	0	.
chr4	143183610	143183611	chr4:143183611:C:T	rs11100779	C	T	T	Sox2_MA0143.3	1	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr4	143186668	143186669	chr4:143186669:A:G	rs13128884	A	G	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr4	143374810	143374811	chr4:143374811:T:C	rs73853824	T	C	T	Sox2_MA0143.3	-20	0	+	0	0	.
chr4	143386949	143386950	chr4:143386950:A:G	rs73853831	A	G	A	Sox2_MA0143.3	13	0	-	0	0	.
chr4	143514001	143514002	chr4:143514002:C:T	rs370709174	C	T	C	Sox2_MA0143.3	26	0	-	0	0	.
chr4	143514008	143514009	chr4:143514009:A:G	rs966554565	A	G	A	Sox2_MA0143.3	19	0	-	0	0	.
chr4	143514043	143514044	chr4:143514044:C:T	rs112075108	C	T	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr4	143532004	143532005	chr4:143532005:A:G	rs79786003	A	G	A	Sox2_MA0143.3	22	0	-	0	0	.
chr4	143559118	143559119	chr4:143559119:C:A	rs17690441	C	A	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr4	143818968	143818969	chr4:143818969:C:A	rs13106488	C	A	.	Sox2_MA0143.3	-3	0	+	0	0	.
chr4	143908019	143908020	chr4:143908020:G:A	rs17019026	G	A	.	Sox2_MA0143.3	14	0	-	0	0	.
chr4	144143140	144143141	chr4:144143141:G:A	rs112461456	G	A	.	Sox2_MA0143.3	14	0	-	0	0	.
chr4	144143140	144143141	chr4:144143141:G:C	chr4:144143141:G:C	G	C	.	Sox2_MA0143.3	14	0	-	0	0	.
chr4	144143156	144143157	chr4:144143157:A:G	rs183022086	A	G	.	Sox2_MA0143.3	-2	0	-	0	0	.
chr4	144286894	144286895	chr4:144286895:G:A	rs7662113	G	A	G	Sox2_MA0143.3	26	0	+	0	0	.
chr4	144293879	144293880	chr4:144293880:A:C	rs4321581	A	C	A	Sox2_MA0143.3	8	0	+	0	0	.
chr4	144354146	144354147	chr4:144354147:T:A	rs115966499	T	A	T	Sox2_MA0143.3	-4	0	+	0	0	.
chr4	144357722	144357723	chr4:144357723:A:G	rs4371571	A	G	A	Sox2_MA0143.3	-20	0	+	0	0	.
chr4	144509144	144509145	chr4:144509145:T:C	rs6827794	T	C	C	Sox2_MA0143.3	22	0	-	0	0	.
chr4	144513591	144513592	chr4:144513592:A:G	rs1032297	A	G	A	Sox2_MA0143.3	13	0	+	0	0	.
chr4	144516166	144516167	chr4:144516167:A:G	rs7677035	A	G	A	Sox2_MA0143.3	10	0	-	0	0	.
chr4	144696548	144696549	chr4:144696549:G:A	rs188919137	G	A	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr4	144818795	144818796	chr4:144818796:T:C	rs553914738	T	C	T	Sox2_MA0143.3	2	1	-	8.676919043985553	2.5582713367092715	CCATTGTG
chr4	144980085	144980086	chr4:144980086:G:A	rs184651583	G	A	G	Sox2_MA0143.3	26	0	+	0	0	.
chr4	145014517	145014518	chr4:145014518:G:A	rs11946220	G	A	G	Sox2_MA0143.3	7	1	-	9.206767037375712	9.800647049772198	CCTTTGTC
chr4	145180886	145180887	chr4:145180887:A:G	rs146217955	A	G	A	Sox2_MA0143.3	-19	0	+	0	0	.
chr4	145180887	145180888	chr4:145180888:C:T	rs1372127860	C	T	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr4	145388430	145388431	chr4:145388431:T:C	rs1373351	T	C	T	Sox2_MA0143.3	2	1	-	9.019595766176417	2.900948058900136	CCATTGTC
chr4	145482476	145482477	chr4:145482477:C:G	rs1392142689	C	G	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr4	145482494	145482495	chr4:145482495:C:T	rs531645079	C	T	C	Sox2_MA0143.3	11	0	+	0	0	.
chr4	145482495	145482496	chr4:145482496:C:T	rs13118865	C	T	C	Sox2_MA0143.3	12	0	+	0	0	.
chr4	145716298	145716299	chr4:145716299:T:G	rs576915545	T	G	T	Sox2_MA0143.3	2	1	+	9.206767037375712	2.900948058900136	CCTTTGTC
chr4	145716313	145716314	chr4:145716314:C:T	rs148370596	C	T	C	Sox2_MA0143.3	17	0	+	0	0	.
chr4	145887863	145887864	chr4:145887864:T:G	rs7662069	T	G	G	Sox2_MA0143.3	-11	0	+	0	0	.
chr4	146138282	146138283	chr4:146138283:A:G	rs13101861	A	G	A	Sox2_MA0143.3	-6	0	+	0	0	.
chr4	146192336	146192337	chr4:146192337:C:T	rs17021212	C	T	C	Sox2_MA0143.3	11	0	+	0	0	.
chr4	146242326	146242327	chr4:146242327:C:A	rs61466735	C	A	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr4	146256188	146256189	chr4:146256189:G:A	rs1057560	G	A	G	Sox2_MA0143.3	8	0	-	0	0	.
chr4	146292759	146292760	chr4:146292760:T:C	rs4516736	T	C	C	Sox2_MA0143.3	9	0	+	0	0	.
chr4	146335474	146335475	chr4:146335475:G:C	rs4835032	G	C	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr4	146367909	146367910	chr4:146367910:G:T	rs2244306	G	T	T	Sox2_MA0143.3	21	0	-	0	0	.
chr4	146389122	146389123	chr4:146389123:T:C	rs72729852	T	C	T	Sox2_MA0143.3	2	1	-	9.613475778572903	3.494828071296623	CCATTGTT
chr4	146645835	146645836	chr4:146645836:G:A	rs6537429	G	A	A	Sox2_MA0143.3	-14	0	-	0	0	.
chr4	146960354	146960355	chr4:146960355:T:C	rs76854641	T	C	T	Sox2_MA0143.3	18	0	+	0	0	.
chr4	147161182	147161183	chr4:147161183:C:T	rs56666042	C	T	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr4	147237009	147237010	chr4:147237010:G:A	rs570469543	G	A	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr4	147678138	147678139	chr4:147678139:T:C	rs7660361	T	C	T	Sox2_MA0143.3	-8	0	-	0	0	.
chr4	147861317	147861318	chr4:147861318:C:T	rs6857492	C	T	C	Sox2_MA0143.3	27	0	+	0	0	.
chr4	147943356	147943357	chr4:147943357:T:C	rs6815620	T	C	T	Sox2_MA0143.3	3	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr4	147958431	147958432	chr4:147958432:T:C	rs17024201	T	C	T	Sox2_MA0143.3	-5	0	-	0	0	.
chr4	148075066	148075067	chr4:148075067:T:G	rs13141425	T	G	T	Sox2_MA0143.3	-6	0	+	0	0	.
chr4	148076145	148076146	chr4:148076146:C:T	rs11933330	C	T	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr4	148310525	148310526	chr4:148310526:A:G	rs72728499	A	G	A	Sox2_MA0143.3	-18	0	-	0	0	.
chr4	148333457	148333458	chr4:148333458:T:C	rs28645256	T	C	T	Sox2_MA0143.3	10	0	+	0	0	.
chr4	148684780	148684781	chr4:148684781:A:C	rs76958279	A	C	A	Sox2_MA0143.3	19	0	-	0	0	.
chr4	148716597	148716598	chr4:148716598:A:G	rs893468826	A	G	A	Sox2_MA0143.3	-6	0	-	0	0	.
chr4	148744513	148744514	chr4:148744514:C:G	rs17486337	C	G	G	Sox2_MA0143.3	5	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr4	148812516	148812517	chr4:148812517:G:A	rs485244	G	A	G	Sox2_MA0143.3	1	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr4	148882951	148882952	chr4:148882952:A:T	rs142700967	A	T	A	Sox2_MA0143.3	-2	0	+	0	0	.
chr4	148883722	148883723	chr4:148883723:G:A	rs78410455	G	A	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr4	149204318	149204319	chr4:149204319:T:C	rs510115	T	C	T	Sox2_MA0143.3	21	0	-	0	0	.
chr4	149341365	149341366	chr4:149341366:A:G	rs976966719	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr4	149341387	149341388	chr4:149341388:C:A	rs36016999	C	A	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr4	149349663	149349664	chr4:149349664:T:A	rs4311288	T	A	T	Sox2_MA0143.3	-1	0	+	0	0	.
chr4	149409536	149409537	chr4:149409537:T:C	rs72953690	T	C	T	Sox2_MA0143.3	-16	0	-	0	0	.
chr4	149533021	149533022	chr4:149533022:A:G	rs1503710	A	G	A	Sox2_MA0143.3	23	0	-	0	0	.
chr4	149555975	149555976	chr4:149555976:C:A	rs6535690	C	A	C	Sox2_MA0143.3	5	1	-	9.019595766176417	2.110840986861197	CCATTGTC
chr4	149738399	149738400	chr4:149738400:C:T	rs1394050	C	T	T	Sox2_MA0143.3	23	0	+	0	0	.
chr4	149785959	149785960	chr4:149785960:C:T	rs116365658	C	T	C	Sox2_MA0143.3	20	0	+	0	0	.
chr4	149825634	149825635	chr4:149825635:G:A	rs12504006	G	A	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr4	149835655	149835656	chr4:149835656:T:G	rs6849686	T	G	G	Sox2_MA0143.3	25	0	-	0	0	.
chr4	150010674	150010675	chr4:150010675:A:G	chr4:150010675:A:G	A	G	A	Sox2_MA0143.3	11	0	+	0	0	.
chr4	150078064	150078065	chr4:150078065:C:T	rs112573840	C	T	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr4	150126934	150126935	chr4:150126935:A:G	rs4557242	A	G	A	Sox2_MA0143.3	22	0	+	0	0	.
chr4	150131216	150131217	chr4:150131217:G:A	rs116652887	G	A	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr4	150821842	150821843	chr4:150821843:A:G	rs1040809390	A	G	A	Sox2_MA0143.3	18	0	-	0	0	.
chr4	150826322	150826323	chr4:150826323:G:T	rs192464331	G	T	G	Sox2_MA0143.3	17	0	-	0	0	.
chr4	151199444	151199445	chr4:151199445:C:A	rs77376201	C	A	C	Sox2_MA0143.3	13	0	-	0	0	.
chr4	151252033	151252034	chr4:151252034:T:C	rs11099798	T	C	C	Sox2_MA0143.3	6	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr4	151266799	151266800	chr4:151266800:A:G	rs4504229	A	G	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr4	151268215	151268216	chr4:151268216:C:A	rs11733473	C	A	A	Sox2_MA0143.3	-3	0	-	0	0	.
chr4	151295001	151295002	chr4:151295002:T:G	rs7668541	T	G	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr4	151307562	151307563	chr4:151307563:A:G	rs28532429	A	G	G	Sox2_MA0143.3	4	1	-	9.206767037375712	2.2980122580604916	CCTTTGTC
chr4	151322649	151322650	chr4:151322650:C:T	rs9790482	C	T	T	Sox2_MA0143.3	19	0	+	0	0	.
chr4	151678749	151678750	chr4:151678750:G:A	rs6849050	G	A	G	Sox2_MA0143.3	24	0	+	0	0	.
chr4	151690521	151690522	chr4:151690522:C:T	rs35434409	C	T	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr4	151824926	151824927	chr4:151824927:A:G	rs2136961	A	G	G	Sox2_MA0143.3	6	1	-	9.019595766176417	2.110840986861197	CCATTGTC
chr4	151901819	151901820	chr4:151901820:C:G	rs529160	C	G	G	Sox2_MA0143.3	12	0	+	0	0	.
chr4	151912673	151912674	chr4:151912674:G:A	rs1812168	G	A	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr4	151941855	151941856	chr4:151941856:G:A	rs180955934	G	A	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr4	152073481	152073482	chr4:152073482:A:G	rs7695187	A	G	A	Sox2_MA0143.3	19	0	-	0	0	.
chr4	152073490	152073491	chr4:152073491:A:G	rs13103011	A	G	A	Sox2_MA0143.3	10	0	-	0	0	.
chr4	152075428	152075429	chr4:152075429:G:A	rs79194401	G	A	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr4	152096299	152096300	chr4:152096300:A:G	rs747110	A	G	G	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr4	152104450	152104451	chr4:152104451:C:A	rs6811845	C	A	T	Sox2_MA0143.3	9	0	+	0	0	.
chr4	152109627	152109628	chr4:152109628:T:C	rs77485946	T	C	T	Sox2_MA0143.3	-12	0	-	0	0	.
chr4	152431642	152431643	chr4:152431643:C:T	rs964475	C	T	T	Sox2_MA0143.3	-17	0	-	0	0	.
chr4	152489237	152489238	chr4:152489238:C:A	rs10021011	C	A	A	Sox2_MA0143.3	-20	0	-	0	0	.
chr4	152554319	152554320	chr4:152554320:C:T	rs138569547	C	T	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr4	152598566	152598567	chr4:152598567:C:T	rs114982341	C	T	C	Sox2_MA0143.3	17	0	+	0	0	.
chr4	153076076	153076077	chr4:153076077:G:A	rs12645463	G	A	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr4	153083594	153083595	chr4:153083595:G:A	rs13113435	G	A	G	Sox2_MA0143.3	26	0	+	0	0	.
chr4	153160051	153160052	chr4:153160052:A:G	rs147414653	A	G	A	Sox2_MA0143.3	10	0	+	0	0	.
chr4	153167300	153167301	chr4:153167301:A:G	rs58403775	A	G	A	Sox2_MA0143.3	-16	0	-	0	0	.
chr4	153183538	153183539	chr4:153183539:A:G	rs4583738	A	G	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr4	153209701	153209702	chr4:153209702:C:T	rs6833000	C	T	c	Sox2_MA0143.3	-18	0	-	0	0	.
chr4	153294841	153294842	chr4:153294842:A:T	rs73854645	A	T	A	Sox2_MA0143.3	-7	0	+	0	0	.
chr4	153343226	153343227	chr4:153343227:A:T	rs6856922	A	T	A	Sox2_MA0143.3	15	0	+	0	0	.
chr4	153466786	153466787	chr4:153466787:G:C	rs552195645	G	C	G	Sox2_MA0143.3	11	0	+	0	0	.
chr4	153466800	153466801	chr4:153466801:C:A	rs188834395	C	A	C	Sox2_MA0143.3	25	0	+	0	0	.
chr4	153472850	153472851	chr4:153472851:A:T	rs72729661	A	T	A	Sox2_MA0143.3	17	0	+	0	0	.
chr4	153522822	153522823	chr4:153522823:C:T	rs558934076	C	T	C	Sox2_MA0143.3	12	0	+	0	0	.
chr4	153535848	153535849	chr4:153535849:T:A	rs79403652	T	A	T	Sox2_MA0143.3	11	0	+	0	0	.
chr4	153963748	153963749	chr4:153963749:C:A	rs13125201	C	A	C	Sox2_MA0143.3	17	0	-	0	0	.
chr4	154167872	154167873	chr4:154167873:T:C	chr4:154167873:T:C	T	C	T	Sox2_MA0143.3	15	0	-	0	0	.
chr4	154205088	154205089	chr4:154205089:C:T	rs6535988	C	T	T	Sox2_MA0143.3	13	0	-	0	0	.
chr4	154276738	154276739	chr4:154276739:G:T	rs6823540	G	T	T	Sox2_MA0143.3	-4	0	-	0	0	.
chr4	154399685	154399686	chr4:154399686:T:C	chr4:154399686:T:C	T	C	T	Sox2_MA0143.3	8	0	-	0	0	.
chr4	154500557	154500558	chr4:154500558:A:G	rs4345160	A	G	G	Sox2_MA0143.3	15	0	+	0	0	.
chr4	154511791	154511792	chr4:154511792:G:A	rs4547780	G	A	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr4	154514268	154514269	chr4:154514269:C:T	rs4634201	C	T	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr4	154560239	154560240	chr4:154560240:A:T	rs76666840	A	T	A	Sox2_MA0143.3	18	0	-	0	0	.
chr4	154590820	154590821	chr4:154590821:C:T	rs184835608	C	T	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr4	154602693	154602694	chr4:154602694:A:T	rs1118823	A	T	T	Sox2_MA0143.3	2	1	-	3.5547341015215945	3.3675628303222993	CCTTTGTA
chr4	154738714	154738715	chr4:154738715:G:A	rs557049856	G	A	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr4	154740986	154740987	chr4:154740987:A:G	rs529937909	A	G	A	Sox2_MA0143.3	-9	0	+	0	0	.
chr4	154782175	154782176	chr4:154782176:G:A	rs156546	G	A	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr4	154923851	154923852	chr4:154923852:C:T	rs62325287	C	T	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr4	155161582	155161583	chr4:155161583:G:C	rs1028825788	G	C	G	Sox2_MA0143.3	7	1	+	8.864090315184848	9.206767037375712	CCTTTGTG
chr4	155249206	155249207	chr4:155249207:G:A	rs9998104	G	A	G	Sox2_MA0143.3	8	0	+	0	0	.
chr4	155268067	155268068	chr4:155268068:G:A	rs17032744	G	A	G	Sox2_MA0143.3	26	0	-	0	0	.
chr4	155574486	155574487	chr4:155574487:C:T	rs4691758	C	T	C	Sox2_MA0143.3	21	0	+	0	0	.
chr4	155593241	155593242	chr4:155593242:G:A	rs190248700	G	A	G	Sox2_MA0143.3	-2	0	+	0	0	.
chr4	155666266	155666267	chr4:155666267:C:G	rs2625242	C	G	C	Sox2_MA0143.3	25	0	-	0	0	.
chr4	155668166	155668167	chr4:155668167:G:T	rs777033799	G	T	G	Sox2_MA0143.3	17	0	-	0	0	.
chr4	155760767	155760768	chr4:155760768:T:C	rs77169028	T	C	T	Sox2_MA0143.3	11	0	-	0	0	.
chr4	155906748	155906749	chr4:155906749:G:A	rs141897047	G	A	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr4	155914799	155914800	chr4:155914800:G:A	rs13107055	G	A	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr4	155915005	155915006	chr4:155915006:C:G	rs116140924	C	G	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr4	155960454	155960455	chr4:155960455:A:G	rs34549551	A	G	G	Sox2_MA0143.3	2	1	+	8.676919043985553	2.5582713367092715	CCATTGTG
chr4	155960630	155960631	chr4:155960631:G:A	chr4:155960631:G:A	G	A	G	Sox2_MA0143.3	11	0	+	0	0	.
chr4	155965375	155965376	chr4:155965376:G:A	rs4691182	G	A	G	Sox2_MA0143.3	27	0	+	0	0	.
chr4	156170251	156170252	chr4:156170252:A:G	rs72687403	A	G	G	Sox2_MA0143.3	23	0	+	0	0	.
chr4	156238430	156238431	chr4:156238431:C:T	rs72687469	C	T	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr4	156393388	156393389	chr4:156393389:A:C	rs1844654	A	C	c	Sox2_MA0143.3	-10	0	+	0	0	.
chr4	156466185	156466186	chr4:156466186:C:T	rs4362870	C	T	C	Sox2_MA0143.3	7	1	+	9.019595766176417	9.613475778572903	CCATTGTC
chr4	156476946	156476947	chr4:156476947:A:C	rs17316388	A	C	A	Sox2_MA0143.3	2	1	-	9.206767037375712	2.900948058900136	CCTTTGTC
chr4	156589034	156589035	chr4:156589035:G:T	rs13118852	G	T	T	Sox2_MA0143.3	-13	0	+	0	0	.
chr4	156609675	156609676	chr4:156609676:C:G	rs13137034	C	G	C	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr4	156673259	156673260	chr4:156673260:T:G	chr4:156673260:T:G	T	G	T	Sox2_MA0143.3	2	1	+	9.800647049772198	3.494828071296623	CCTTTGTT
chr4	156770940	156770941	chr4:156770941:T:C	rs112969588	T	C	T	Sox2_MA0143.3	-12	0	+	0	0	.
chr4	156778196	156778197	chr4:156778197:T:C	rs542141790	T	C	T	Sox2_MA0143.3	-3	0	+	0	0	.
chr4	156942199	156942200	chr4:156942200:T:C	rs116750064	T	C	T	Sox2_MA0143.3	-7	0	+	0	0	.
chr4	156976631	156976632	chr4:156976632:T:G	rs13133399	T	G	T	Sox2_MA0143.3	24	0	+	0	0	.
chr4	157172168	157172169	chr4:157172169:G:T	rs72685586	G	T	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr4	157509275	157509276	chr4:157509276:T:C	rs6854084	T	C	T	Sox2_MA0143.3	-12	0	+	0	0	.
chr4	157770660	157770661	chr4:157770661:A:C	rs11100133	A	C	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr4	157793860	157793861	chr4:157793861:T:C	rs75371717	T	C	T	Sox2_MA0143.3	27	0	-	0	0	.
chr4	157889276	157889277	chr4:157889277:A:G	rs2197791	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr4	157993279	157993280	chr4:157993280:A:T	rs62335314	A	T	A	Sox2_MA0143.3	-20	0	-	0	0	.
chr4	158004289	158004290	chr4:158004290:T:C	rs62335339	T	C	T	Sox2_MA0143.3	-20	0	+	0	0	.
chr4	158195793	158195794	chr4:158195794:C:A	rs72695750	C	A	A	Sox2_MA0143.3	-3	0	+	0	0	.
chr4	158347486	158347487	chr4:158347487:G:A	rs72703741	G	A	A	Sox2_MA0143.3	-16	0	-	0	0	.
chr4	158457567	158457568	chr4:158457568:C:A	rs4691500	C	A	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr4	158521456	158521457	chr4:158521457:C:T	rs7685141	C	T	T	Sox2_MA0143.3	27	0	-	0	0	.
chr4	158521457	158521458	chr4:158521458:G:C	rs7685470	G	C	C	Sox2_MA0143.3	26	0	-	0	0	.
chr4	158704500	158704501	chr4:158704501:G:A	rs56172511	G	A	G	Sox2_MA0143.3	23	0	+	0	0	.
chr4	159173462	159173463	chr4:159173463:A:G	rs11933601	A	G	A	Sox2_MA0143.3	-5	0	+	0	0	.
chr4	159201325	159201326	chr4:159201326:T:G	chr4:159201326:T:G	T	G	T	Sox2_MA0143.3	-3	0	+	0	0	.
chr4	159229330	159229331	chr4:159229331:G:A	rs7686769	G	A	G	Sox2_MA0143.3	0	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr4	159309212	159309213	chr4:159309213:C:G	rs111392986	C	G	C	Sox2_MA0143.3	10	0	+	0	0	.
chr4	159309226	159309227	chr4:159309227:T:G	chr4:159309227:T:G	T	G	T	Sox2_MA0143.3	24	0	+	0	0	.
chr4	159364391	159364392	chr4:159364392:C:T	rs13143005	C	T	T	Sox2_MA0143.3	27	0	-	0	0	.
chr4	159367335	159367336	chr4:159367336:C:T	rs80064282	C	T	C	Sox2_MA0143.3	18	0	+	0	0	.
chr4	159396117	159396118	chr4:159396118:C:G	rs7692457	C	G	C	Sox2_MA0143.3	24	0	+	0	0	.
chr4	159398636	159398637	chr4:159398637:G:A	rs11732754	G	A	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr4	159413707	159413708	chr4:159413708:A:G	rs12645666	A	G	A	Sox2_MA0143.3	-12	0	+	0	0	.
chr4	159413745	159413746	chr4:159413746:C:T	rs146034610	C	T	C	Sox2_MA0143.3	26	0	+	0	0	.
chr4	159499013	159499014	chr4:159499014:C:G	rs754251514	C	G	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr4	159503462	159503463	chr4:159503463:A:G	rs7660063	A	G	G	Sox2_MA0143.3	-3	0	+	0	0	.
chr4	160044733	160044734	chr4:160044734:G:A	rs1428411	G	A	-	Sox2_MA0143.3	-17	0	-	0	0	.
chr4	160082912	160082913	chr4:160082913:G:T	rs10004639	G	T	T	Sox2_MA0143.3	23	0	+	0	0	.
chr4	160246996	160246997	chr4:160246997:T:G	rs74938770	T	G	T	Sox2_MA0143.3	-11	0	+	0	0	.
chr4	160353849	160353850	chr4:160353850:G:A	rs294504	G	A	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr4	160406149	160406150	chr4:160406150:G:A	rs186226069	G	A	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr4	160649918	160649919	chr4:160649919:A:G	rs6536530	A	G	A	Sox2_MA0143.3	3	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr4	161118505	161118506	chr4:161118506:C:T	rs115005870	C	T	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr4	161133179	161133180	chr4:161133180:C:T	rs10030221	C	T	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr4	161405776	161405777	chr4:161405777:C:G	rs78271077	C	G	C	Sox2_MA0143.3	18	0	-	0	0	.
chr4	161405797	161405798	chr4:161405798:G:A	rs77204993	G	A	G	Sox2_MA0143.3	-3	0	-	0	0	.
chr4	161509792	161509793	chr4:161509793:C:T	rs17041137	C	T	C	Sox2_MA0143.3	0	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr4	161760348	161760349	chr4:161760349:A:T	rs6854122	A	T	A	Sox2_MA0143.3	8	0	-	0	0	.
chr4	162059662	162059663	chr4:162059663:G:A	rs12186179	G	A	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr4	162163849	162163850	chr4:162163850:G:A	rs74766542	G	A	G	Sox2_MA0143.3	25	0	+	0	0	.
chr4	162337844	162337845	chr4:162337845:A:G	rs12512558	A	G	A	Sox2_MA0143.3	-6	0	-	0	0	.
chr4	162350587	162350588	chr4:162350588:A:C	rs559682411	A	C	A	Sox2_MA0143.3	27	0	-	0	0	.
chr4	162352912	162352913	chr4:162352913:T:C	rs1450397	T	C	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr4	162493147	162493148	chr4:162493148:T:G	rs10005687	T	G	g	Sox2_MA0143.3	-12	0	+	0	0	.
chr4	162561126	162561127	chr4:162561127:T:C	rs2315407	T	C	-	Sox2_MA0143.3	19	0	+	0	0	.
chr4	162581211	162581212	chr4:162581212:A:G	rs28526600	A	G	A	Sox2_MA0143.3	15	0	+	0	0	.
chr4	162684210	162684211	chr4:162684211:C:T	rs195921	C	T	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr4	162952672	162952673	chr4:162952673:T:C	rs11935589	T	C	T	Sox2_MA0143.3	6	1	+	9.019595766176417	2.110840986861197	CCATTGTC
chr4	162952688	162952689	chr4:162952689:A:T	rs28621868	A	T	A	Sox2_MA0143.3	22	0	+	0	0	.
chr4	163102230	163102231	chr4:163102231:A:C	rs115996532	A	C	A	Sox2_MA0143.3	22	0	-	0	0	.
chr4	163350686	163350687	chr4:163350687:C:T	rs77419821	C	T	C	Sox2_MA0143.3	7	1	+	9.019595766176417	9.613475778572903	CCATTGTC
chr4	163414094	163414095	chr4:163414095:A:C	rs6855398	A	C	C	Sox2_MA0143.3	11	0	-	0	0	.
chr4	163536354	163536355	chr4:163536355:G:A	rs6840193	G	A	G	Sox2_MA0143.3	11	0	+	0	0	.
chr4	163556466	163556467	chr4:163556467:A:T	rs72989850	A	T	A	Sox2_MA0143.3	21	0	+	0	0	.
chr4	163587836	163587837	chr4:163587837:G:A	rs6536737	G	A	A	Sox2_MA0143.3	25	0	-	0	0	.
chr4	163587879	163587880	chr4:163587880:T:C	rs7695517	T	C	T	Sox2_MA0143.3	-18	0	-	0	0	.
chr4	163731384	163731385	chr4:163731385:C:T	rs35875658	C	T	T	Sox2_MA0143.3	-3	0	-	0	0	.
chr4	163833806	163833807	chr4:163833807:G:A	rs76919119	G	A	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr4	163851824	163851825	chr4:163851825:T:C	rs11100520	T	C	C	Sox2_MA0143.3	21	0	-	0	0	.
chr4	163851828	163851829	chr4:163851829:G:A	rs112799849	G	A	A	Sox2_MA0143.3	17	0	-	0	0	.
chr4	163916224	163916225	chr4:163916225:T:C	rs78071834	T	C	T	Sox2_MA0143.3	11	0	+	0	0	.
chr4	164056788	164056789	chr4:164056789:G:A	rs111700207	G	A	G	Sox2_MA0143.3	20	0	-	0	0	.
chr4	164166558	164166559	chr4:164166559:T:C	rs966941	T	C	C	Sox2_MA0143.3	2	1	-	9.613475778572903	3.494828071296623	CCATTGTT
chr4	164177449	164177450	chr4:164177450:G:A	rs7673540	G	A	A	Sox2_MA0143.3	11	0	-	0	0	.
chr4	164706757	164706758	chr4:164706758:A:G	rs1919334	A	G	a	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr4	164716957	164716958	chr4:164716958:C:T	rs17622172	C	T	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr4	164766097	164766098	chr4:164766098:G:C	rs72694086	G	C	G	Sox2_MA0143.3	9	0	-	0	0	.
chr4	164789941	164789942	chr4:164789942:G:A	rs6536851	G	A	A	Sox2_MA0143.3	-4	0	-	0	0	.
chr4	164874993	164874994	chr4:164874994:A:G	rs7684645	A	G	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr4	164913755	164913756	chr4:164913756:G:C	rs72697916	G	C	G	Sox2_MA0143.3	27	0	-	0	0	.
chr4	164937809	164937810	chr4:164937810:T:A	rs59310432	T	A	N	Sox2_MA0143.3	-3	0	-	0	0	.
chr4	164937814	164937815	chr4:164937815:A:G	chr4:164937815:A:G	A	G	a	Sox2_MA0143.3	-8	0	-	0	0	.
chr4	164991073	164991074	chr4:164991074:T:C	rs148095619	T	C	T	Sox2_MA0143.3	-8	0	+	0	0	.
chr4	165203229	165203230	chr4:165203230:G:A	rs17172935	G	A	G	Sox2_MA0143.3	1	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr4	165335659	165335660	chr4:165335660:G:C	rs1866218	G	C	C	Sox2_MA0143.3	14	0	-	0	0	.
chr4	165378334	165378335	chr4:165378335:T:C	rs36230153	T	C	T	Sox2_MA0143.3	2	1	+	9.206767037375712	2.900948058900136	CCTTTGTC
chr4	165427116	165427117	chr4:165427117:A:G	rs34313639	A	G	a	Sox2_MA0143.3	2	1	+	8.676919043985553	2.5582713367092715	CCATTGTG
chr4	165441010	165441011	chr4:165441011:T:C	rs7656705	T	C	T	Sox2_MA0143.3	7	1	-	3.5547341015215945	8.864090315184848	CCTTTGTA
chr4	165489998	165489999	chr4:165489999:C:T	rs1354603698	C	T	C	Sox2_MA0143.3	21	0	-	0	0	.
chr4	165493440	165493441	chr4:165493441:G:A	chr4:165493441:G:A	G	A	G	Sox2_MA0143.3	25	0	+	0	0	.
chr4	165602808	165602809	chr4:165602809:G:T	rs2322293	G	T	G	Sox2_MA0143.3	0	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr4	165635628	165635629	chr4:165635629:T:C	rs1246910	T	C	C	Sox2_MA0143.3	8	0	-	0	0	.
chr4	165664406	165664407	chr4:165664407:C:T	rs35715617	C	T	C	Sox2_MA0143.3	12	0	-	0	0	.
chr4	166128931	166128932	chr4:166128932:T:A	rs1497943	T	A	T	Sox2_MA0143.3	27	0	-	0	0	.
chr4	166357546	166357547	chr4:166357547:G:A	rs77736723	G	A	A	Sox2_MA0143.3	13	0	-	0	0	.
chr4	166357551	166357552	chr4:166357552:A:T	rs75393850	A	T	A	Sox2_MA0143.3	8	0	-	0	0	.
chr4	166357684	166357685	chr4:166357685:C:T	rs72988431	C	T	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr4	166595115	166595116	chr4:166595116:G:C	rs72695534	G	C	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr4	167215519	167215520	chr4:167215520:G:A	rs9996196	G	A	G	Sox2_MA0143.3	-3	0	-	0	0	.
chr4	167234026	167234027	chr4:167234027:A:G	rs11557043	A	G	A	Sox2_MA0143.3	-15	0	+	0	0	.
chr4	167308648	167308649	chr4:167308649:A:G	rs7668767	A	G	A	Sox2_MA0143.3	16	0	-	0	0	.
chr4	167494896	167494897	chr4:167494897:C:T	rs11133064	C	T	c	Sox2_MA0143.3	-20	0	-	0	0	.
chr4	167620414	167620415	chr4:167620415:G:A	rs13102749	G	A	G	Sox2_MA0143.3	12	0	+	0	0	.
chr4	167790822	167790823	chr4:167790823:C:A	rs12331978	C	A	C	Sox2_MA0143.3	14	0	+	0	0	.
chr4	167857879	167857880	chr4:167857880:G:C	rs190667445	G	C	G	Sox2_MA0143.3	-3	0	-	0	0	.
chr4	167897558	167897559	chr4:167897559:G:A	rs17525374	G	A	G	Sox2_MA0143.3	-12	0	+	0	0	.
chr4	168273957	168273958	chr4:168273958:C:A	rs76527646	C	A	C	Sox2_MA0143.3	25	0	+	0	0	.
chr4	168325859	168325860	chr4:168325860:C:T	rs71620495	C	T	C	Sox2_MA0143.3	0	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr4	168421997	168421998	chr4:168421998:G:A	rs148809229	G	A	G	Sox2_MA0143.3	21	0	+	0	0	.
chr4	168440745	168440746	chr4:168440746:C:T	rs11728342	C	T	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr4	168506414	168506415	chr4:168506415:C:T	rs28499195	C	T	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr4	168554191	168554192	chr4:168554192:G:A	rs13146985	G	A	G	Sox2_MA0143.3	20	0	+	0	0	.
chr4	168558820	168558821	chr4:168558821:A:G	rs113065450	A	G	A	Sox2_MA0143.3	11	0	-	0	0	.
chr4	168569432	168569433	chr4:168569433:T:A	rs112475270	T	A	T	Sox2_MA0143.3	23	0	-	0	0	.
chr4	168826805	168826806	chr4:168826806:C:T	rs7681716	C	T	T	Sox2_MA0143.3	-19	0	+	0	0	.
chr4	168836731	168836732	chr4:168836732:G:A	rs77808233	G	A	G	Sox2_MA0143.3	27	0	+	0	0	.
chr4	168883112	168883113	chr4:168883113:C:T	rs75734522	C	T	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr4	168883113	168883114	chr4:168883114:G:A	rs113079387	G	A	G	Sox2_MA0143.3	-3	0	+	0	0	.
chr4	168953014	168953015	chr4:168953015:G:T	chr4:168953015:G:T	G	T	G	Sox2_MA0143.3	23	0	+	0	0	.
chr4	169305453	169305454	chr4:169305454:T:C	rs4692707	T	C	T	Sox2_MA0143.3	24	0	-	0	0	.
chr4	169439301	169439302	chr4:169439302:T:A	rs35886187	T	A	T	Sox2_MA0143.3	18	0	+	0	0	.
chr4	169502040	169502041	chr4:169502041:C:A	rs72974708	C	A	C	Sox2_MA0143.3	14	0	-	0	0	.
chr4	169557260	169557261	chr4:169557261:T:C	rs11943164	T	C	T	Sox2_MA0143.3	8	0	-	0	0	.
chr4	169583748	169583749	chr4:169583749:C:T	rs35301337	C	T	C	Sox2_MA0143.3	17	0	-	0	0	.
chr4	169724267	169724268	chr4:169724268:G:A	rs6845516	G	A	G	Sox2_MA0143.3	26	0	+	0	0	.
chr4	169919239	169919240	chr4:169919240:C:T	rs113690663	C	T	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr4	169942665	169942666	chr4:169942666:C:A	chr4:169942666:C:A	C	A	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr4	169987690	169987691	chr4:169987691:T:C	rs79788181	T	C	T	Sox2_MA0143.3	-9	0	+	0	0	.
chr4	170109543	170109544	chr4:170109544:G:T	rs72702401	G	T	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr4	170137561	170137562	chr4:170137562:C:T	rs479686	C	T	C	Sox2_MA0143.3	-5	0	-	0	0	.
chr4	170274806	170274807	chr4:170274807:C:T	rs17055541	C	T	C	Sox2_MA0143.3	10	0	+	0	0	.
chr4	170675921	170675922	chr4:170675922:A:G	rs71607810	A	G	A	Sox2_MA0143.3	-10	0	+	0	0	.
chr4	170678346	170678347	chr4:170678347:A:G	rs6828494	A	G	G	Sox2_MA0143.3	-16	0	-	0	0	.
chr4	171203063	171203064	chr4:171203064:C:T	rs11722373	C	T	T	Sox2_MA0143.3	-17	0	+	0	0	.
chr4	171234334	171234335	chr4:171234335:A:G	rs4692874	A	G	G	Sox2_MA0143.3	16	0	-	0	0	.
chr4	171362108	171362109	chr4:171362109:A:G	rs10000417	A	G	A	Sox2_MA0143.3	-9	0	+	0	0	.
chr4	171598119	171598120	chr4:171598120:G:A	rs6841635	G	A	A	Sox2_MA0143.3	9	0	-	0	0	.
chr4	171714817	171714818	chr4:171714818:G:T	rs142421632	G	T	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr4	171972078	171972079	chr4:171972079:A:T	rs404757	A	T	T	Sox2_MA0143.3	16	0	+	0	0	.
chr4	172073632	172073633	chr4:172073633:T:G	rs1039625	T	G	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr4	172127310	172127311	chr4:172127311:A:G	rs78587437	A	G	A	Sox2_MA0143.3	-1	0	+	0	0	.
chr4	172158348	172158349	chr4:172158349:C:T	rs6835456	C	T	T	Sox2_MA0143.3	0	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr4	172329748	172329749	chr4:172329749:G:A	rs6553626	G	A	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr4	172348763	172348764	chr4:172348764:C:T	rs333398	C	T	T	Sox2_MA0143.3	5	1	-	9.019595766176417	2.110840986861197	CCATTGTC
chr4	172356161	172356162	chr4:172356162:A:C	rs116448489	A	C	A	Sox2_MA0143.3	-20	0	-	0	0	.
chr4	172636533	172636534	chr4:172636534:T:C	rs12649403	T	C	T	Sox2_MA0143.3	10	0	-	0	0	.
chr4	172772926	172772927	chr4:172772927:A:C	rs10031656	A	C	A	Sox2_MA0143.3	12	0	-	0	0	.
chr4	173009972	173009973	chr4:173009973:C:T	rs34763838	C	T	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr4	173125191	173125192	chr4:173125192:G:A	rs3966013	G	A	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr4	173191782	173191783	chr4:173191783:T:G	chr4:173191783:T:G	T	G	T	Sox2_MA0143.3	-20	0	+	0	0	.
chr4	173289769	173289770	chr4:173289770:C:A	chr4:173289770:C:A	C	A	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr4	173371806	173371807	chr4:173371807:G:A	rs10032507	G	A	G	Sox2_MA0143.3	0	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr4	173401979	173401980	chr4:173401980:C:A	rs17325472	C	A	C	Sox2_MA0143.3	25	0	+	0	0	.
chr4	173435311	173435312	chr4:173435312:T:C	rs10034403	T	C	T	Sox2_MA0143.3	-20	0	-	0	0	.
chr4	173468893	173468894	chr4:173468894:C:G	rs1442158	C	G	C	Sox2_MA0143.3	18	0	+	0	0	.
chr4	173518851	173518852	chr4:173518852:C:T	rs79124154	C	T	C	Sox2_MA0143.3	23	0	+	0	0	.
chr4	173533449	173533450	chr4:173533450:A:G	rs9312542	A	G	A	Sox2_MA0143.3	22	0	+	0	0	.
chr4	173627290	173627291	chr4:173627291:A:G	rs4403028	A	G	A	Sox2_MA0143.3	12	0	-	0	0	.
chr4	173699600	173699601	chr4:173699601:C:T	rs111814120	C	T	C	Sox2_MA0143.3	0	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr4	173802683	173802684	chr4:173802684:T:C	rs4695886	T	C	C	Sox2_MA0143.3	21	0	+	0	0	.
chr4	173934892	173934893	chr4:173934893:T:C	rs7660053	T	C	T	Sox2_MA0143.3	25	0	+	0	0	.
chr4	174136896	174136897	chr4:174136897:C:T	rs55797631	C	T	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr4	174164927	174164928	chr4:174164928:T:C	rs10003923	T	C	T	Sox2_MA0143.3	22	0	+	0	0	.
chr4	174516461	174516462	chr4:174516462:C:A	rs2555646	C	A	C	Sox2_MA0143.3	-5	0	-	0	0	.
chr4	174516469	174516470	chr4:174516470:C:A	rs2555645	C	A	A	Sox2_MA0143.3	-13	0	-	0	0	.
chr4	174634298	174634299	chr4:174634299:G:A	rs76105805	G	A	G	Sox2_MA0143.3	11	0	-	0	0	.
chr4	174639307	174639308	chr4:174639308:C:T	rs111601540	C	T	C	Sox2_MA0143.3	7	1	+	9.206767037375712	9.800647049772198	CCTTTGTC
chr4	174650744	174650745	chr4:174650745:T:C	rs6838325	T	C	C	Sox2_MA0143.3	14	0	-	0	0	.
chr4	174682373	174682374	chr4:174682374:C:T	rs72706158	C	T	T	Sox2_MA0143.3	16	0	-	0	0	.
chr4	174989963	174989964	chr4:174989964:G:A	rs9993661	G	A	A	Sox2_MA0143.3	14	0	+	0	0	.
chr4	175226030	175226031	chr4:175226031:G:A	rs71644862	G	A	G	Sox2_MA0143.3	1	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr4	175451617	175451618	chr4:175451618:T:C	rs73013865	T	C	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr4	175777231	175777232	chr4:175777232:C:T	rs2643998	C	T	T	Sox2_MA0143.3	10	0	+	0	0	.
chr4	175838609	175838610	chr4:175838610:T:G	rs80182558	T	G	T	Sox2_MA0143.3	11	0	-	0	0	.
chr4	176001232	176001233	chr4:176001233:C:T	rs72704568	C	T	C	Sox2_MA0143.3	10	0	-	0	0	.
chr4	176021206	176021207	chr4:176021207:G:C	rs11937076	G	C	g	Sox2_MA0143.3	-4	0	-	0	0	.
chr4	176054034	176054035	chr4:176054035:C:T	rs17062444	C	T	T	Sox2_MA0143.3	19	0	+	0	0	.
chr4	176209947	176209948	chr4:176209948:T:C	rs13130029	T	C	t	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr4	176237535	176237536	chr4:176237536:A:T	rs72706398	A	T	A	Sox2_MA0143.3	4	1	-	8.864090315184848	1.9553355358696274	CCTTTGTG
chr4	176314434	176314435	chr4:176314435:C:T	rs13130930	C	T	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr4	176376116	176376117	chr4:176376117:T:A	rs9312600	T	A	A	Sox2_MA0143.3	21	0	-	0	0	.
chr4	176393821	176393822	chr4:176393822:T:C	rs59334466	T	C	T	Sox2_MA0143.3	3	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr4	176405080	176405081	chr4:176405081:G:T	rs13145359	G	T	G	Sox2_MA0143.3	-3	0	-	0	0	.
chr4	176425162	176425163	chr4:176425163:G:A	rs6840938	G	A	G	Sox2_MA0143.3	9	0	-	0	0	.
chr4	176425163	176425164	chr4:176425164:C:A	rs6842422	C	A	C	Sox2_MA0143.3	8	0	-	0	0	.
chr4	176484126	176484127	chr4:176484127:C:T	rs2054167	C	T	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr4	176526900	176526901	chr4:176526901:A:C	rs147829753	A	C	A	Sox2_MA0143.3	-7	0	+	0	0	.
chr4	176571580	176571581	chr4:176571581:A:G	rs17689065	A	G	A	Sox2_MA0143.3	-12	0	-	0	0	.
chr4	176650259	176650260	chr4:176650260:G:A	rs79474826	G	A	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr4	176650555	176650556	chr4:176650556:G:T	rs1485756	G	T	T	Sox2_MA0143.3	-10	0	+	0	0	.
chr4	176662781	176662782	chr4:176662782:G:A	rs4690358	G	A	G	Sox2_MA0143.3	16	0	+	0	0	.
chr4	176680889	176680890	chr4:176680890:A:C	rs17063551	A	C	a	Sox2_MA0143.3	13	0	-	0	0	.
chr4	176794321	176794322	chr4:176794322:G:A	rs72713993	G	A	G	Sox2_MA0143.3	5	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr4	177094673	177094674	chr4:177094674:T:A	rs1371233	T	A	T	Sox2_MA0143.3	4	1	+	9.800647049772198	2.8918922704569785	CCTTTGTT
chr4	177163839	177163840	chr4:177163840:C:T	rs62329213	C	T	C	Sox2_MA0143.3	21	0	+	0	0	.
chr4	177351761	177351762	chr4:177351762:T:C	rs3805169	T	C	T	Sox2_MA0143.3	-12	0	+	0	0	.
chr4	177393317	177393318	chr4:177393318:G:A	rs115280927	G	A	C	Sox2_MA0143.3	10	0	+	0	0	.
chr4	177547879	177547880	chr4:177547880:A:G	rs11723668	A	G	a	Sox2_MA0143.3	-12	0	+	0	0	.
chr4	177761945	177761946	chr4:177761946:A:G	rs7699140	A	G	G	Sox2_MA0143.3	27	0	+	0	0	.
chr4	177767033	177767034	chr4:177767034:G:A	rs34347867	G	A	G	Sox2_MA0143.3	21	0	-	0	0	.
chr4	178186462	178186463	chr4:178186463:A:G	rs28449873	A	G	A	Sox2_MA0143.3	3	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr4	178314459	178314460	chr4:178314460:C:T	rs115919583	C	T	c	Sox2_MA0143.3	-13	0	-	0	0	.
chr4	178344114	178344115	chr4:178344115:C:G	rs13327907	C	G	C	Sox2_MA0143.3	0	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr4	178488371	178488372	chr4:178488372:A:G	rs7677592	A	G	A	Sox2_MA0143.3	4	1	-	8.676919043985553	1.7681642646703322	CCATTGTG
chr4	178729125	178729126	chr4:178729126:A:G	rs452424	A	G	G	Sox2_MA0143.3	7	1	+	3.5547341015215945	8.864090315184848	CCTTTGTA
chr4	178753190	178753191	chr4:178753191:G:C	rs346133	G	C	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr4	178997951	178997952	chr4:178997952:C:A	rs7691163	C	A	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr4	179116445	179116446	chr4:179116446:T:C	rs56154611	T	C	T	Sox2_MA0143.3	-7	0	+	0	0	.
chr4	179353994	179353995	chr4:179353995:G:T	rs17768174	G	T	G	Sox2_MA0143.3	9	0	-	0	0	.
chr4	179504585	179504586	chr4:179504586:G:A	rs2681359	G	A	A	Sox2_MA0143.3	5	1	+	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr4	179583152	179583153	chr4:179583153:A:G	rs2716791	A	G	A	Sox2_MA0143.3	-18	0	+	0	0	.
chr4	179596065	179596066	chr4:179596066:A:G	rs72997918	A	G	G	Sox2_MA0143.3	2	1	-	8.864090315184848	2.5582713367092715	CCTTTGTG
chr4	179901984	179901985	chr4:179901985:T:C	rs17068372	T	C	T	Sox2_MA0143.3	-2	0	-	0	0	.
chr4	180057724	180057725	chr4:180057725:C:G	rs72709706	C	G	C	Sox2_MA0143.3	23	0	+	0	0	.
chr4	180422956	180422957	chr4:180422957:T:G	rs11930787	T	G	T	Sox2_MA0143.3	-19	0	+	0	0	.
chr4	180654671	180654672	chr4:180654672:A:T	rs2613054	A	T	T	Sox2_MA0143.3	21	0	-	0	0	.
chr4	180757658	180757659	chr4:180757659:G:C	rs2613003	G	C	C	Sox2_MA0143.3	19	0	-	0	0	.
chr4	180875338	180875339	chr4:180875339:A:C	rs11724592	A	C	A	Sox2_MA0143.3	-19	0	+	0	0	.
chr4	181301573	181301574	chr4:181301574:G:T	rs17183114	G	T	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr4	181363054	181363055	chr4:181363055:G:A	rs17071188	G	A	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr4	181363070	181363071	chr4:181363071:C:A	rs4861947	C	A	C	Sox2_MA0143.3	1	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr4	181379579	181379580	chr4:181379580:A:G	rs2309472	A	G	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr4	181417395	181417396	chr4:181417396:C:T	rs7698202	C	T	C	Sox2_MA0143.3	10	0	+	0	0	.
chr4	181421008	181421009	chr4:181421009:C:T	rs6552501	C	T	T	Sox2_MA0143.3	12	0	+	0	0	.
chr4	181424917	181424918	chr4:181424918:A:G	rs1897995	A	G	A	Sox2_MA0143.3	10	0	+	0	0	.
chr4	181609702	181609703	chr4:181609703:G:A	rs10011109	G	A	A	Sox2_MA0143.3	14	0	-	0	0	.
chr4	181660150	181660151	chr4:181660151:G:A	rs140165765	G	A	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr4	181688657	181688658	chr4:181688658:G:T	rs12500888	G	T	T	Sox2_MA0143.3	16	0	-	0	0	.
chr4	181690383	181690384	chr4:181690384:C:T	rs4527522	C	T	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr4	181696887	181696888	chr4:181696888:C:T	rs13127192	C	T	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr4	181756450	181756451	chr4:181756451:G:A	rs7656889	G	A	G	Sox2_MA0143.3	1	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr4	181807981	181807982	chr4:181807982:A:T	rs13127939	A	T	A	Sox2_MA0143.3	-20	0	-	0	0	.
chr4	181898276	181898277	chr4:181898277:C:G	rs28498215	C	G	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr4	181898286	181898287	chr4:181898287:T:C	rs11941925	T	C	T	Sox2_MA0143.3	2	1	+	8.864090315184848	2.5582713367092715	CCTTTGTG
chr4	181959554	181959555	chr4:181959555:A:G	rs182697827	A	G	A	Sox2_MA0143.3	12	0	-	0	0	.
chr4	182023049	182023050	chr4:182023050:T:G	rs112831211	T	G	T	Sox2_MA0143.3	-4	0	+	0	0	.
chr4	182091566	182091567	chr4:182091567:A:G	rs75729769	A	G	A	Sox2_MA0143.3	6	1	-	8.676919043985553	1.7681642646703326	CCATTGTG
chr4	182148222	182148223	chr4:182148223:C:G	rs4861498	C	G	C	Sox2_MA0143.3	8	0	-	0	0	.
chr4	182177176	182177177	chr4:182177177:T:C	rs6813793	T	C	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr4	182238356	182238357	chr4:182238357:C:A	rs12509246	C	A	C	Sox2_MA0143.3	14	0	+	0	0	.
chr4	182310631	182310632	chr4:182310632:T:C	rs2675516	T	C	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr4	182324772	182324773	chr4:182324773:T:C	rs67110926	T	C	T	Sox2_MA0143.3	-1	0	+	0	0	.
chr4	182502161	182502162	chr4:182502162:A:G	rs13106786	A	G	A	Sox2_MA0143.3	2	1	+	9.019595766176417	2.900948058900136	CCATTGTC
chr4	182511078	182511079	chr4:182511079:G:C	rs62337220	G	C	C	Sox2_MA0143.3	14	0	-	0	0	.
chr4	182549588	182549589	chr4:182549589:C:T	rs183378069	C	T	C	Sox2_MA0143.3	8	0	+	0	0	.
chr4	182554152	182554153	chr4:182554153:A:G	rs13138350	A	G	A	Sox2_MA0143.3	3	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr4	182644464	182644465	chr4:182644465:C:T	rs11722354	C	T	C	Sox2_MA0143.3	16	0	-	0	0	.
chr4	182904479	182904480	chr4:182904480:A:C	rs17074254	A	C	A	Sox2_MA0143.3	24	0	+	0	0	.
chr4	183098705	183098706	chr4:183098706:C:T	rs142302715	C	T	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr4	183299606	183299607	chr4:183299607:G:A	rs114198091	G	A	g	Sox2_MA0143.3	24	0	+	0	0	.
chr4	183326298	183326299	chr4:183326299:G:A	rs55888838	G	A	G	Sox2_MA0143.3	14	0	-	0	0	.
chr4	183350981	183350982	chr4:183350982:T:C	rs17074628	T	C	T	Sox2_MA0143.3	26	0	-	0	0	.
chr4	183378474	183378475	chr4:183378475:C:T	rs114569759	C	T	C	Sox2_MA0143.3	12	0	-	0	0	.
chr4	183388846	183388847	chr4:183388847:C:T	rs10866259	C	T	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr4	183436690	183436691	chr4:183436691:C:T	rs62357576	C	T	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr4	183438456	183438457	chr4:183438457:A:C	rs11728503	A	C	A	Sox2_MA0143.3	12	0	-	0	0	.
chr4	183438456	183438457	chr4:183438457:A:T	chr4:183438457:A:T	A	T	A	Sox2_MA0143.3	12	0	-	0	0	.
chr4	183439806	183439807	chr4:183439807:A:G	rs4862194	A	G	A	Sox2_MA0143.3	3	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr4	183457681	183457682	chr4:183457682:C:T	rs11132183	C	T	T	Sox2_MA0143.3	19	0	-	0	0	.
chr4	183462958	183462959	chr4:183462959:C:T	rs4241773	C	T	c	Sox2_MA0143.3	-13	0	+	0	0	.
chr4	183479106	183479107	chr4:183479107:C:T	rs73870566	C	T	T	Sox2_MA0143.3	12	0	+	0	0	.
chr4	183537792	183537793	chr4:183537793:A:G	rs4524431	A	G	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr4	183675955	183675956	chr4:183675956:G:C	rs10049952	G	C	G	Sox2_MA0143.3	1	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr4	183730148	183730149	chr4:183730149:G:A	rs11132209	G	A	g	Sox2_MA0143.3	9	0	-	0	0	.
chr4	183766111	183766112	chr4:183766112:A:G	rs116472556	A	G	A	Sox2_MA0143.3	-4	0	-	0	0	.
chr4	183774527	183774528	chr4:183774528:T:C	rs4260573	T	C	T	Sox2_MA0143.3	-16	0	-	0	0	.
chr4	183801746	183801747	chr4:183801747:T:G	rs1041200859	T	G	T	Sox2_MA0143.3	13	0	-	0	0	.
chr4	183808442	183808443	chr4:183808443:G:A	rs6822649	G	A	G	Sox2_MA0143.3	12	0	+	0	0	.
chr4	183876872	183876873	chr4:183876873:T:G	rs13134353	T	G	T	Sox2_MA0143.3	10	0	+	0	0	.
chr4	183906408	183906409	chr4:183906409:G:T	chr4:183906409:G:T	G	T	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr4	183906427	183906428	chr4:183906428:T:C	rs530555400	T	C	T	Sox2_MA0143.3	18	0	+	0	0	.
chr4	183910300	183910301	chr4:183910301:C:T	rs4862266	C	T	T	Sox2_MA0143.3	17	0	-	0	0	.
chr4	183927804	183927805	chr4:183927805:G:A	rs17363081	G	A	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr4	183961986	183961987	chr4:183961987:G:A	rs74570194	G	A	G	Sox2_MA0143.3	26	0	+	0	0	.
chr4	184021952	184021953	chr4:184021953:G:C	rs1970895	G	C	G	Sox2_MA0143.3	-2	0	+	0	0	.
chr4	184165651	184165652	chr4:184165652:T:C	rs5020421	T	C	C	Sox2_MA0143.3	26	0	-	0	0	.
chr4	184201175	184201176	chr4:184201176:A:G	rs79810390	A	G	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr4	184202969	184202970	chr4:184202970:A:G	rs4862339	A	G	G	Sox2_MA0143.3	6	1	-	8.676919043985553	1.7681642646703326	CCATTGTG
chr4	184237537	184237538	chr4:184237538:T:G	rs57091924	T	G	G	Sox2_MA0143.3	25	0	+	0	0	.
chr4	184255618	184255619	chr4:184255619:G:A	rs749779658	G	A	G	Sox2_MA0143.3	18	0	-	0	0	.
chr4	184255653	184255654	chr4:184255654:C:T	rs78517568	C	T	c	Sox2_MA0143.3	-17	0	-	0	0	.
chr4	184347503	184347504	chr4:184347504:C:T	rs72998920	C	T	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr4	184347510	184347511	chr4:184347511:C:A	rs571901638	C	A	C	Sox2_MA0143.3	0	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr4	184390872	184390873	chr4:184390873:C:T	rs66641943	C	T	T	Sox2_MA0143.3	11	0	+	0	0	.
chr4	184460906	184460907	chr4:184460907:C:T	rs793798	C	T	T	Sox2_MA0143.3	-13	0	-	0	0	.
chr4	184477383	184477384	chr4:184477384:C:G	rs59597958	C	G	C	Sox2_MA0143.3	26	0	+	0	0	.
chr4	184731233	184731234	chr4:184731234:C:G	rs7675106	C	G	G	Sox2_MA0143.3	13	0	-	0	0	.
chr4	184855204	184855205	chr4:184855205:G:T	rs6825195	G	T	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr4	184963240	184963241	chr4:184963241:C:T	rs72706968	C	T	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr4	184980282	184980283	chr4:184980283:G:A	rs77751130	G	A	G	Sox2_MA0143.3	-5	0	+	0	0	.
chr4	184980292	184980293	chr4:184980293:G:A	rs56263203	G	A	G	Sox2_MA0143.3	5	1	+	9.613475778572903	2.7047209992576837	CCATTGTT
chr4	184980861	184980862	chr4:184980862:G:T	rs62345948	G	T	G	Sox2_MA0143.3	14	0	-	0	0	.
chr4	184980881	184980882	chr4:184980882:A:G	rs112084052	A	G	A	Sox2_MA0143.3	-6	0	-	0	0	.
chr4	185007624	185007625	chr4:185007625:A:G	rs11737460	A	G	A	Sox2_MA0143.3	22	0	+	0	0	.
chr4	185116901	185116902	chr4:185116902:A:G	rs2871429	A	G	A	Sox2_MA0143.3	-11	0	-	0	0	.
chr4	185118135	185118136	chr4:185118136:A:C	rs6818961	A	C	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr4	185129109	185129110	chr4:185129110:G:A	rs75258253	G	A	G	Sox2_MA0143.3	18	0	+	0	0	.
chr4	185204687	185204688	chr4:185204688:A:G	rs3108244	A	G	G	Sox2_MA0143.3	20	0	-	0	0	.
chr4	185235575	185235576	chr4:185235576:G:A	rs2871439	G	A	A	Sox2_MA0143.3	13	0	+	0	0	.
chr4	185282653	185282654	chr4:185282654:C:T	rs67747917	C	T	C	Sox2_MA0143.3	19	0	-	0	0	.
chr4	185289560	185289561	chr4:185289561:G:A	rs1288538	G	A	G	Sox2_MA0143.3	1	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr4	185301409	185301410	chr4:185301410:G:C	rs114402822	G	C	G	Sox2_MA0143.3	16	0	+	0	0	.
chr4	185306377	185306378	chr4:185306378:T:G	rs753359	T	G	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr4	185345452	185345453	chr4:185345453:A:G	rs115989421	A	G	A	Sox2_MA0143.3	-17	0	-	0	0	.
chr4	185468816	185468817	chr4:185468817:G:A	rs76929525	G	A	c	Sox2_MA0143.3	-15	0	+	0	0	.
chr4	185502522	185502523	chr4:185502523:G:A	rs10866276	G	A	G	Sox2_MA0143.3	21	0	-	0	0	.
chr4	185581158	185581159	chr4:185581159:T:C	rs7665538	T	C	C	Sox2_MA0143.3	11	0	-	0	0	.
chr4	185657374	185657375	chr4:185657375:T:A	rs2306703	T	A	T	Sox2_MA0143.3	6	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr4	185657387	185657388	chr4:185657388:C:T	rs200421171	C	T	C	Sox2_MA0143.3	19	0	+	0	0	.
chr4	185713371	185713372	chr4:185713372:C:A	rs28384265	C	A	C	Sox2_MA0143.3	22	0	+	0	0	.
chr4	185718792	185718793	chr4:185718793:G:A	rs28755896	G	A	G	Sox2_MA0143.3	23	0	+	0	0	.
chr4	185811001	185811002	chr4:185811002:G:A	rs34011237	G	A	G	Sox2_MA0143.3	12	0	-	0	0	.
chr4	185811011	185811012	chr4:185811012:T:C	rs1297545497	T	C	T	Sox2_MA0143.3	2	1	-	8.676919043985553	2.5582713367092715	CCATTGTG
chr4	185828171	185828172	chr4:185828172:A:C	rs5001008	A	C	A	Sox2_MA0143.3	3	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr4	185833295	185833296	chr4:185833296:T:A	chr4:185833296:T:A	T	A	T	Sox2_MA0143.3	-16	0	+	0	0	.
chr4	185833295	185833296	chr4:185833296:T:C	rs543329276	T	C	T	Sox2_MA0143.3	-16	0	+	0	0	.
chr4	185839134	185839135	chr4:185839135:C:T	rs773913104	C	T	T	Sox2_MA0143.3	-18	0	+	0	0	.
chr4	185839135	185839136	chr4:185839136:G:A	rs78114336	G	A	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr4	185839174	185839175	chr4:185839175:A:G	rs75004797	A	G	A	Sox2_MA0143.3	22	0	+	0	0	.
chr4	186011785	186011786	chr4:186011786:A:G	rs28421457	A	G	A	Sox2_MA0143.3	24	0	-	0	0	.
chr4	186028257	186028258	chr4:186028258:T:G	rs62335289	T	G	T	Sox2_MA0143.3	14	0	-	0	0	.
chr4	186091332	186091333	chr4:186091333:A:T	rs6821294	A	T	A	Sox2_MA0143.3	6	1	-	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr4	186106099	186106100	chr4:186106100:T:C	rs74904616	T	C	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr4	186106142	186106143	chr4:186106143:A:T	rs73873720	A	T	A	Sox2_MA0143.3	27	0	+	0	0	.
chr4	186153678	186153679	chr4:186153679:A:G	rs4862650	A	G	G	Sox2_MA0143.3	4	1	-	9.206767037375712	2.2980122580604916	CCTTTGTC
chr4	186189701	186189702	chr4:186189702:G:A	rs7696703	G	A	G	Sox2_MA0143.3	19	0	-	0	0	.
chr4	186193892	186193893	chr4:186193893:C:G	rs7676755	C	G	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr4	186204922	186204923	chr4:186204923:C:G	rs7667777	C	G	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr4	186258055	186258056	chr4:186258056:T:C	rs925453	T	C	C	Sox2_MA0143.3	2	1	-	8.676919043985553	2.5582713367092715	CCATTGTG
chr4	186356466	186356467	chr4:186356467:C:A	rs28631387	C	A	A	Sox2_MA0143.3	10	0	-	0	0	.
chr4	186391979	186391980	chr4:186391980:G:A	rs553296597	G	A	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr4	186438853	186438854	chr4:186438854:A:G	rs1597641	A	G	A	Sox2_MA0143.3	8	0	-	0	0	.
chr4	186482014	186482015	chr4:186482015:C:T	rs6830267	C	T	C	Sox2_MA0143.3	12	0	-	0	0	.
chr4	186539335	186539336	chr4:186539336:C:T	rs34532313	C	T	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr4	186628209	186628210	chr4:186628210:G:A	rs111886222	G	A	G	Sox2_MA0143.3	21	0	+	0	0	.
chr4	186628273	186628274	chr4:186628274:C:T	rs2304867	C	T	C	Sox2_MA0143.3	16	0	+	0	0	.
chr4	186628427	186628428	chr4:186628428:G:A	rs2304866	G	A	A	Sox2_MA0143.3	16	0	-	0	0	.
chr4	186740258	186740259	chr4:186740259:T:C	rs140835507	T	C	T	Sox2_MA0143.3	11	0	-	0	0	.
chr4	186757711	186757712	chr4:186757712:C:T	rs925642	C	T	C	Sox2_MA0143.3	27	0	+	0	0	.
chr4	186805797	186805798	chr4:186805798:T:G	rs6553022	T	G	G	Sox2_MA0143.3	-3	0	+	0	0	.
chr4	186807446	186807447	chr4:186807447:C:A	rs140761359	C	A	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr4	186858386	186858387	chr4:186858387:G:A	rs167721	G	A	G	Sox2_MA0143.3	18	0	+	0	0	.
chr4	186878757	186878758	chr4:186878758:G:A	rs9990736	G	A	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr4	186982413	186982414	chr4:186982414:G:C	rs1030381	G	C	G	Sox2_MA0143.3	18	0	+	0	0	.
chr4	187103521	187103522	chr4:187103522:C:G	rs61597068	C	G	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr4	187174217	187174218	chr4:187174218:C:A	rs116591743	C	A	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr4	187236587	187236588	chr4:187236588:C:T	rs7695955	C	T	T	Sox2_MA0143.3	-6	0	+	0	0	.
chr4	187236604	187236605	chr4:187236605:G:T	rs7696264	G	T	T	Sox2_MA0143.3	11	0	+	0	0	.
chr4	187236772	187236773	chr4:187236773:A:C	rs1948112	A	C	C	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr4	187250534	187250535	chr4:187250535:G:A	rs6553048	G	A	G	Sox2_MA0143.3	16	0	-	0	0	.
chr4	187477478	187477479	chr4:187477479:G:T	rs4862808	G	T	T	Sox2_MA0143.3	25	0	+	0	0	.
chr4	187493444	187493445	chr4:187493445:G:A	rs62354154	G	A	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr4	187530403	187530404	chr4:187530404:T:C	rs56181973	T	C	T	Sox2_MA0143.3	16	0	+	0	0	.
chr4	187560259	187560260	chr4:187560260:T:C	rs72710409	T	C	T	Sox2_MA0143.3	3	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr4	187602308	187602309	chr4:187602309:T:C	rs73015875	T	C	T	Sox2_MA0143.3	-20	0	-	0	0	.
chr4	187889180	187889181	chr4:187889181:C:T	rs13111965	C	T	C	Sox2_MA0143.3	12	0	-	0	0	.
chr4	187961336	187961337	chr4:187961337:C:T	rs62352631	C	T	c	Sox2_MA0143.3	19	0	-	0	0	.
chr4	187995796	187995797	chr4:187995797:A:G	rs1055022334	A	G	A	Sox2_MA0143.3	19	0	+	0	0	.
chr4	188016747	188016748	chr4:188016748:T:A	rs6845234	T	A	A	Sox2_MA0143.3	2	1	+	8.864090315184848	8.676919043985553	CCTTTGTG
chr4	188016747	188016748	chr4:188016748:T:C	chr4:188016748:T:C	T	C	A	Sox2_MA0143.3	2	1	+	8.864090315184848	2.5582713367092715	CCTTTGTG
chr4	188035531	188035532	chr4:188035532:T:C	rs6853977	T	C	t	Sox2_MA0143.3	16	0	-	0	0	.
chr4	188035556	188035557	chr4:188035557:C:T	rs6828123	C	T	t	Sox2_MA0143.3	-9	0	-	0	0	.
chr4	188140449	188140450	chr4:188140450:C:T	rs56412251	C	T	T	Sox2_MA0143.3	25	0	+	0	0	.
chr4	188143503	188143504	chr4:188143504:C:T	rs62351462	C	T	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr4	188170769	188170770	chr4:188170770:C:T	rs78668968	C	T	C	Sox2_MA0143.3	20	0	+	0	0	.
chr4	188263726	188263727	chr4:188263727:C:A	rs74549575	C	A	C	Sox2_MA0143.3	0	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr4	188316104	188316105	chr4:188316105:T:C	rs55859432	T	C	T	Sox2_MA0143.3	-4	0	-	0	0	.
chr4	188506100	188506101	chr4:188506101:T:C	rs112604532	T	C	T	Sox2_MA0143.3	25	0	-	0	0	.
chr4	188824531	188824532	chr4:188824532:A:T	rs111162737	A	T	-	Sox2_MA0143.3	-6	0	-	0	0	.
chr4	189046939	189046940	chr4:189046940:T:A	rs7664971	T	A	T	Sox2_MA0143.3	-17	0	-	0	0	.
chr4	189070507	189070508	chr4:189070508:G:A	rs35665664	G	A	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr4	189090436	189090437	chr4:189090437:T:A	rs12501232	T	A	T	Sox2_MA0143.3	20	0	-	0	0	.
chr4	189201377	189201378	chr4:189201378:G:T	rs6821468	G	T	G	Sox2_MA0143.3	16	0	-	0	0	.
chr4	189208170	189208171	chr4:189208171:T:C	rs11732071	T	C	T	Sox2_MA0143.3	6	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr4	189239053	189239054	chr4:189239054:A:G	rs10050304	A	G	A	Sox2_MA0143.3	18	0	+	0	0	.
chr4	189301930	189301931	chr4:189301931:G:A	rs13133883	G	A	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr4	189416968	189416969	chr4:189416969:G:T	rs10034049	G	T	G	Sox2_MA0143.3	15	0	-	0	0	.
chr4	189502718	189502719	chr4:189502719:G:T	rs6553321	G	T	t	Sox2_MA0143.3	-17	0	+	0	0	.
chr4	190019325	190019326	chr4:190019326:C:G	rs112774678	C	G	.	Sox2_MA0143.3	-8	0	+	0	0	.
chr4	190019967	190019968	chr4:190019968:C:T	rs7695737	C	T	.	Sox2_MA0143.3	8	0	+	0	0	.
chr4	190112417	190112418	chr4:190112418:C:G	rs1370721511	C	G	.	Sox2_MA0143.3	21	0	+	0	0	.
chr4	190112422	190112423	chr4:190112423:C:A	rs372681402	C	A	.	Sox2_MA0143.3	26	0	+	0	0	.
chr4	190112423	190112424	chr4:190112424:G:A	rs1379353690	G	A	.	Sox2_MA0143.3	27	0	+	0	0	.
chr4	190182176	190182177	chr4:190182177:C:T	rs1247699071	C	T	.	Sox2_MA0143.3	-1	0	-	0	0	.
chr5	20614	20615	chr5:20615:A:G	rs114763195	A	G	.	Sox2_MA0143.3	4	1	-	8.864090315184848	1.9553355358696274	CCTTTGTG
chr5	93701	93702	chr5:93702:G:T	rs76662915	G	T	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr5	176277	176278	chr5:176278:G:A	rs145017210	G	A	G	Sox2_MA0143.3	14	0	+	0	0	.
chr5	219763	219764	chr5:219764:G:C	rs565873404	G	C	G	Sox2_MA0143.3	-3	0	+	0	0	.
chr5	220498	220499	chr5:220499:T:C	rs62346526	T	C	T	Sox2_MA0143.3	17	0	-	0	0	.
chr5	231792	231793	chr5:231793:T:C	rs10052012	T	C	C	Sox2_MA0143.3	10	0	-	0	0	.
chr5	231818	231819	chr5:231819:C:T	rs376882506	C	T	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr5	302651	302652	chr5:302652:A:G	rs12517416	A	G	-	Sox2_MA0143.3	18	0	+	0	0	.
chr5	302803	302804	chr5:302804:A:G	rs1436294004	A	G	-	Sox2_MA0143.3	-17	0	+	0	0	.
chr5	308236	308237	chr5:308237:T:C	rs56075848	T	C	C	Sox2_MA0143.3	6	1	+	9.206767037375712	2.298012258060492	CCTTTGTC
chr5	346848	346849	chr5:346849:G:A	rs7727676	G	A	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr5	413475	413476	chr5:413476:G:A	rs11744075	G	A	G	Sox2_MA0143.3	-9	0	+	0	0	.
chr5	413478	413479	chr5:413479:G:C	rs2261659	G	C	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr5	413505	413506	chr5:413506:G:A	rs2261623	G	A	g	Sox2_MA0143.3	21	0	+	0	0	.
chr5	452239	452240	chr5:452240:C:T	rs1114664	C	T	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr5	458035	458036	chr5:458036:C:T	rs72698504	C	T	C	Sox2_MA0143.3	24	0	+	0	0	.
chr5	458883	458884	chr5:458884:T:C	rs2434698	T	C	T	Sox2_MA0143.3	18	0	+	0	0	.
chr5	458887	458888	chr5:458888:G:A	rs2434699	G	A	g	Sox2_MA0143.3	22	0	+	0	0	.
chr5	477518	477519	chr5:477519:G:A	rs4334924	G	A	G	Sox2_MA0143.3	19	0	+	0	0	.
chr5	522164	522165	chr5:522165:T:C	rs11747348	T	C	T	Sox2_MA0143.3	-15	0	+	0	0	.
chr5	578772	578773	chr5:578773:C:T	rs4957051	C	T	T	Sox2_MA0143.3	25	0	-	0	0	.
chr5	580937	580938	chr5:580938:A:G	rs4541696	A	G	G	Sox2_MA0143.3	10	0	-	0	0	.
chr5	601531	601532	chr5:601532:G:A	rs3828570	G	A	G	Sox2_MA0143.3	10	0	+	0	0	.
chr5	637327	637328	chr5:637328:A:G	rs1709554	A	G	G	Sox2_MA0143.3	-5	0	+	0	0	.
chr5	637332	637333	chr5:637333:C:T	rs1697983	C	T	T	Sox2_MA0143.3	0	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr5	653227	653228	chr5:653228:T:C	rs2458815	T	C	C	Sox2_MA0143.3	16	0	+	0	0	.
chr5	663888	663889	chr5:663889:G:A	rs112704282	G	A	G	Sox2_MA0143.3	14	0	+	0	0	.
chr5	674970	674971	chr5:674971:T:C	rs1709549	T	C	T	Sox2_MA0143.3	9	0	-	0	0	.
chr5	674990	674991	chr5:674991:G:A	rs145880946	G	A	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr5	677222	677223	chr5:677223:G:A	rs115016030	G	A	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr5	683496	683497	chr5:683497:A:G	rs183291734	A	G	N	Sox2_MA0143.3	3	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr5	714797	714798	chr5:714798:T:G	rs71234664	T	G	t	Sox2_MA0143.3	3	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr5	759253	759254	chr5:759254:A:T	rs150393761	A	T	a	Sox2_MA0143.3	-11	0	+	0	0	.
chr5	840183	840184	chr5:840184:G:T	rs3822814	G	T	g	Sox2_MA0143.3	5	1	+	9.019595766176417	2.110840986861197	CCATTGTC
chr5	937440	937441	chr5:937441:T:C	rs58234453	T	C	C	Sox2_MA0143.3	22	0	-	0	0	.
chr5	946564	946565	chr5:946565:C:T	rs16903688	C	T	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr5	946599	946600	chr5:946600:G:T	rs149947833	G	T	G	Sox2_MA0143.3	16	0	+	0	0	.
chr5	1016954	1016955	chr5:1016955:A:C	rs13361345	A	C	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr5	1017105	1017106	chr5:1017106:C:A	rs111271200	C	A	c	Sox2_MA0143.3	-15	0	-	0	0	.
chr5	1022210	1022211	chr5:1022211:G:A	rs56006100	G	A	g	Sox2_MA0143.3	-17	0	+	0	0	.
chr5	1026205	1026206	chr5:1026206:T:C	rs62330238	T	C	-	Sox2_MA0143.3	-5	0	+	0	0	.
chr5	1026604	1026605	chr5:1026605:A:G	rs72707203	A	G	-	Sox2_MA0143.3	24	0	+	0	0	.
chr5	1049468	1049469	chr5:1049469:T:C	rs60534941	T	C	c	Sox2_MA0143.3	10	0	+	0	0	.
chr5	1105712	1105713	chr5:1105713:C:T	rs77940844	C	T	C	Sox2_MA0143.3	20	0	+	0	0	.
chr5	1107312	1107313	chr5:1107313:C:A	rs4535497	C	A	A	Sox2_MA0143.3	10	0	-	0	0	.
chr5	1206810	1206811	chr5:1206811:C:T	rs6554658	C	T	T	Sox2_MA0143.3	18	0	-	0	0	.
chr5	1209003	1209004	chr5:1209004:C:G	chr5:1209004:C:G	C	G	C	Sox2_MA0143.3	20	0	-	0	0	.
chr5	1285921	1285922	chr5:1285922:C:T	rs62332583	C	T	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr5	1286353	1286354	chr5:1286354:A:G	rs111668843	A	G	A	Sox2_MA0143.3	19	0	-	0	0	.
chr5	1298019	1298020	chr5:1298020:G:A	chr5:1298020:G:A	G	A	G	Sox2_MA0143.3	-14	0	+	0	0	.
chr5	1313260	1313261	chr5:1313261:C:T	rs151065326	C	T	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr5	1364323	1364324	chr5:1364324:T:C	rs11745877	T	C	T	Sox2_MA0143.3	4	1	+	8.864090315184848	1.9553355358696274	CCTTTGTG
chr5	1437926	1437927	chr5:1437927:G:A	rs10068876	G	A	A	Sox2_MA0143.3	20	0	-	0	0	.
chr5	1452164	1452165	chr5:1452165:G:C	rs2078247	G	C	G	Sox2_MA0143.3	17	0	+	0	0	.
chr5	1463473	1463474	chr5:1463474:T:C	rs56264807	T	C	T	Sox2_MA0143.3	19	0	-	0	0	.
chr5	1470784	1470785	chr5:1470785:G:A	rs2277005	G	A	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr5	1492443	1492444	chr5:1492444:A:G	rs9800090	A	G	G	Sox2_MA0143.3	23	0	-	0	0	.
chr5	1508154	1508155	chr5:1508155:T:C	rs36966	T	C	T	Sox2_MA0143.3	-4	0	+	0	0	.
chr5	1550826	1550827	chr5:1550827:T:C	rs10079102	T	C	C	Sox2_MA0143.3	17	0	-	0	0	.
chr5	1583676	1583677	chr5:1583677:C:T	rs114405397	C	T	-	Sox2_MA0143.3	-15	0	-	0	0	.
chr5	1604087	1604088	chr5:1604088:C:T	rs73732120	C	T	-	Sox2_MA0143.3	26	0	-	0	0	.
chr5	1627837	1627838	chr5:1627838:G:C	rs13170565	G	C	g	Sox2_MA0143.3	-2	0	-	0	0	.
chr5	1669942	1669943	chr5:1669943:C:T	rs6877074	C	T	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr5	1671219	1671220	chr5:1671220:A:G	rs7708389	A	G	G	Sox2_MA0143.3	25	0	+	0	0	.
chr5	1685478	1685479	chr5:1685479:G:A	rs10512656	G	A	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr5	1702617	1702618	chr5:1702618:A:G	rs1106418	A	G	A	Sox2_MA0143.3	19	0	+	0	0	.
chr5	1704986	1704987	chr5:1704987:A:G	rs2883367	A	G	A	Sox2_MA0143.3	-4	0	+	0	0	.
chr5	1743714	1743715	chr5:1743715:G:C	rs11960490	G	C	g	Sox2_MA0143.3	-10	0	-	0	0	.
chr5	1751372	1751373	chr5:1751373:C:T	rs10070410	C	T	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr5	1760887	1760888	chr5:1760888:G:A	rs59550535	G	A	A	Sox2_MA0143.3	22	0	+	0	0	.
chr5	1835191	1835192	chr5:1835192:C:T	rs2131588	C	T	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr5	1838086	1838087	chr5:1838087:T:C	rs73026112	T	C	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr5	1838711	1838712	chr5:1838712:A:G	rs10061246	A	G	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr5	1938511	1938512	chr5:1938512:A:G	rs901495	A	G	N	Sox2_MA0143.3	2	1	+	8.676919043985553	2.5582713367092715	CCATTGTG
chr5	1959765	1959766	chr5:1959766:G:A	rs901506	G	A	g	Sox2_MA0143.3	14	0	-	0	0	.
chr5	2004093	2004094	chr5:2004094:C:T	rs10474734	C	T	T	Sox2_MA0143.3	18	0	+	0	0	.
chr5	2039577	2039578	chr5:2039578:T:C	rs59451087	T	C	C	Sox2_MA0143.3	26	0	+	0	0	.
chr5	2072633	2072634	chr5:2072634:G:A	rs4975827	G	A	A	Sox2_MA0143.3	21	0	-	0	0	.
chr5	2165923	2165924	chr5:2165924:G:A	rs74292161	G	A	G	Sox2_MA0143.3	14	0	-	0	0	.
chr5	2173231	2173232	chr5:2173232:C:T	rs78452034	C	T	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr5	2244161	2244162	chr5:2244162:T:C	rs113590730	T	C	T	Sox2_MA0143.3	21	0	+	0	0	.
chr5	2281688	2281689	chr5:2281689:A:G	rs567309	A	G	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr5	2294490	2294491	chr5:2294491:G:A	rs1434841858	G	A	G	Sox2_MA0143.3	22	0	-	0	0	.
chr5	2336288	2336289	chr5:2336289:C:T	rs56262971	C	T	C	Sox2_MA0143.3	27	0	-	0	0	.
chr5	2351746	2351747	chr5:2351747:G:C	rs10065546	G	C	G	Sox2_MA0143.3	7	1	+	8.676919043985553	9.019595766176417	CCATTGTG
chr5	2356077	2356078	chr5:2356078:T:C	rs58825166	T	C	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr5	2356084	2356085	chr5:2356085:C:T	rs2652139	C	T	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr5	2358695	2358696	chr5:2358696:C:A	rs13355047	C	A	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr5	2432302	2432303	chr5:2432303:C:T	rs181436744	C	T	c	Sox2_MA0143.3	-20	0	-	0	0	.
chr5	2497369	2497370	chr5:2497370:A:G	rs462722	A	G	A	Sox2_MA0143.3	-19	0	+	0	0	.
chr5	2523904	2523905	chr5:2523905:G:A	rs73733396	G	A	G	Sox2_MA0143.3	-12	0	+	0	0	.
chr5	2578550	2578551	chr5:2578551:G:A	rs455012	G	A	G	Sox2_MA0143.3	11	0	+	0	0	.
chr5	2608460	2608461	chr5:2608461:C:G	rs445625	C	G	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr5	2639307	2639308	chr5:2639308:G:A	rs323676	G	A	A	Sox2_MA0143.3	-17	0	+	0	0	.
chr5	2639313	2639314	chr5:2639314:C:T	rs323677	C	T	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr5	2640235	2640236	chr5:2640236:A:G	rs323652	A	G	G	Sox2_MA0143.3	8	0	-	0	0	.
chr5	2643626	2643627	chr5:2643627:A:T	rs6860279	A	T	A	Sox2_MA0143.3	-19	0	+	0	0	.
chr5	2686371	2686372	chr5:2686372:A:G	rs116308263	A	G	A	Sox2_MA0143.3	3	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr5	2711720	2711721	chr5:2711721:G:A	rs72643728	G	A	G	Sox2_MA0143.3	15	0	-	0	0	.
chr5	2792601	2792602	chr5:2792602:A:C	rs10068012	A	C	C	Sox2_MA0143.3	4	1	-	9.206767037375712	2.2980122580604916	CCTTTGTC
chr5	2799867	2799868	chr5:2799868:T:A	rs73735918	T	A	T	Sox2_MA0143.3	-15	0	+	0	0	.
chr5	2869760	2869761	chr5:2869761:C:T	rs4866691	C	T	T	Sox2_MA0143.3	19	0	+	0	0	.
chr5	2885698	2885699	chr5:2885699:C:T	rs2934546	C	T	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr5	3048522	3048523	chr5:3048523:T:C	rs10063535	T	C	t	Sox2_MA0143.3	-11	0	+	0	0	.
chr5	3057277	3057278	chr5:3057278:G:A	rs4280872	G	A	G	Sox2_MA0143.3	27	0	-	0	0	.
chr5	3069311	3069312	chr5:3069312:T:C	rs456566	T	C	T	Sox2_MA0143.3	22	0	+	0	0	.
chr5	3091621	3091622	chr5:3091622:C:T	rs73039149	C	T	C	Sox2_MA0143.3	23	0	-	0	0	.
chr5	3105668	3105669	chr5:3105669:G:A	rs76378258	G	A	G	Sox2_MA0143.3	21	0	+	0	0	.
chr5	3105673	3105674	chr5:3105674:G:T	rs314005	G	T	G	Sox2_MA0143.3	26	0	+	0	0	.
chr5	3118779	3118780	chr5:3118780:T:C	rs1389879	T	C	T	Sox2_MA0143.3	6	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr5	3122100	3122101	chr5:3122101:G:A	rs160563	G	A	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr5	3134604	3134605	chr5:3134605:G:A	rs7726783	G	A	G	Sox2_MA0143.3	1	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr5	3220728	3220729	chr5:3220729:C:T	rs72735252	C	T	T	Sox2_MA0143.3	-8	0	-	0	0	.
chr5	3222489	3222490	chr5:3222490:C:G	rs1215680	C	G	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr5	3251883	3251884	chr5:3251884:A:G	rs17570571	A	G	A	Sox2_MA0143.3	12	0	+	0	0	.
chr5	3275966	3275967	chr5:3275967:G:A	rs4866540	G	A	A	Sox2_MA0143.3	-10	0	-	0	0	.
chr5	3287843	3287844	chr5:3287844:A:G	rs4476727	A	G	G	Sox2_MA0143.3	4	1	-	8.676919043985553	1.7681642646703322	CCATTGTG
chr5	3301094	3301095	chr5:3301095:A:G	rs3884534	A	G	A	Sox2_MA0143.3	-1	0	-	0	0	.
chr5	3311174	3311175	chr5:3311175:T:C	rs7707498	T	C	C	Sox2_MA0143.3	19	0	-	0	0	.
chr5	3311473	3311474	chr5:3311474:G:C	rs112575697	G	C	g	Sox2_MA0143.3	19	0	+	0	0	.
chr5	3325338	3325339	chr5:3325339:A:G	rs73733768	A	G	A	Sox2_MA0143.3	24	0	-	0	0	.
chr5	3342346	3342347	chr5:3342347:G:T	rs36104556	G	T	g	Sox2_MA0143.3	-13	0	-	0	0	.
chr5	3349683	3349684	chr5:3349684:G:A	rs72739357	G	A	G	Sox2_MA0143.3	15	0	-	0	0	.
chr5	3360883	3360884	chr5:3360884:C:T	rs7703524	C	T	T	Sox2_MA0143.3	1	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr5	3360890	3360891	chr5:3360891:A:C	rs11133983	A	C	A	Sox2_MA0143.3	8	0	+	0	0	.
chr5	3364086	3364087	chr5:3364087:A:G	rs10050840	A	G	G	Sox2_MA0143.3	23	0	-	0	0	.
chr5	3380223	3380224	chr5:3380224:G:A	rs251434	G	A	G	Sox2_MA0143.3	15	0	+	0	0	.
chr5	3397352	3397353	chr5:3397353:G:T	rs6869954	G	T	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr5	3401981	3401982	chr5:3401982:G:A	rs381733	G	A	g	Sox2_MA0143.3	-6	0	-	0	0	.
chr5	3417880	3417881	chr5:3417881:A:G	rs13170639	A	G	A	Sox2_MA0143.3	9	0	-	0	0	.
chr5	3639288	3639289	chr5:3639289:G:C	rs13168881	G	C	c	Sox2_MA0143.3	-18	0	+	0	0	.
chr5	3639332	3639333	chr5:3639333:T:G	chr5:3639333:T:G	T	G	t	Sox2_MA0143.3	26	0	+	0	0	.
chr5	3683827	3683828	chr5:3683828:G:A	rs10075362	G	A	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr5	3739740	3739741	chr5:3739741:C:T	rs17697136	C	T	C	Sox2_MA0143.3	15	0	-	0	0	.
chr5	3886898	3886899	chr5:3886899:C:T	rs6860576	C	T	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr5	4014639	4014640	chr5:4014640:C:T	rs660733	C	T	C	Sox2_MA0143.3	0	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr5	4020110	4020111	chr5:4020111:A:T	rs473275	A	T	T	Sox2_MA0143.3	18	0	-	0	0	.
chr5	4020134	4020135	chr5:4020135:C:T	rs473196	C	T	T	Sox2_MA0143.3	-6	0	-	0	0	.
chr5	4106285	4106286	chr5:4106286:T:G	rs2452883	T	G	T	Sox2_MA0143.3	-2	0	-	0	0	.
chr5	4191172	4191173	chr5:4191173:A:G	rs73044049	A	G	A	Sox2_MA0143.3	3	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr5	4225863	4225864	chr5:4225864:A:T	rs16873044	A	T	A	Sox2_MA0143.3	-17	0	-	0	0	.
chr5	4375460	4375461	chr5:4375461:A:C	rs261128	A	C	-	Sox2_MA0143.3	2	1	+	9.019595766176417	2.900948058900136	CCATTGTC
chr5	4540765	4540766	chr5:4540766:G:A	rs1032706778	G	A	G	Sox2_MA0143.3	10	0	+	0	0	.
chr5	4662209	4662210	chr5:4662210:G:A	rs7447371	G	A	A	Sox2_MA0143.3	11	0	-	0	0	.
chr5	4700473	4700474	chr5:4700474:A:C	rs4702913	A	C	A	Sox2_MA0143.3	20	0	-	0	0	.
chr5	4726943	4726944	chr5:4726944:A:G	rs17750180	A	G	A	Sox2_MA0143.3	-18	0	-	0	0	.
chr5	4868278	4868279	chr5:4868279:A:C	chr5:4868279:A:C	A	C	A	Sox2_MA0143.3	18	0	-	0	0	.
chr5	4868305	4868306	chr5:4868306:A:G	rs112832572	A	G	A	Sox2_MA0143.3	-9	0	-	0	0	.
chr5	4931014	4931015	chr5:4931015:T:C	rs621356	T	C	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr5	4984643	4984644	chr5:4984644:G:C	rs30470	G	C	C	Sox2_MA0143.3	26	0	-	0	0	.
chr5	5077379	5077380	chr5:5077380:C:G	rs270628	C	G	G	Sox2_MA0143.3	0	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr5	5136093	5136094	chr5:5136094:T:C	rs7720806	T	C	C	Sox2_MA0143.3	4	1	+	8.676919043985553	1.7681642646703322	CCATTGTG
chr5	5138466	5138467	chr5:5138467:T:G	rs270214	T	G	T	Sox2_MA0143.3	22	0	+	0	0	.
chr5	5183113	5183114	chr5:5183114:T:C	rs16874927	T	C	T	Sox2_MA0143.3	-16	0	+	0	0	.
chr5	5220579	5220580	chr5:5220580:G:A	rs34819663	G	A	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr5	5221454	5221455	chr5:5221455:C:T	rs12658487	C	T	C	Sox2_MA0143.3	16	0	-	0	0	.
chr5	5222214	5222215	chr5:5222215:G:A	rs73735753	G	A	G	Sox2_MA0143.3	25	0	-	0	0	.
chr5	5222222	5222223	chr5:5222223:A:G	rs4702248	A	G	G	Sox2_MA0143.3	17	0	-	0	0	.
chr5	5292848	5292849	chr5:5292849:G:C	rs4585408	G	C	C	Sox2_MA0143.3	5	1	+	9.613475778572903	2.7047209992576837	CCATTGTT
chr5	5335830	5335831	chr5:5335831:G:A	rs151000191	G	A	G	Sox2_MA0143.3	21	0	-	0	0	.
chr5	5342443	5342444	chr5:5342444:C:T	rs79280821	C	T	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr5	5342456	5342457	chr5:5342457:T:C	rs34713805	T	C	T	Sox2_MA0143.3	-4	0	+	0	0	.
chr5	5364747	5364748	chr5:5364748:C:T	rs4702263	C	T	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr5	5454413	5454414	chr5:5454414:G:A	rs114328132	G	A	G	Sox2_MA0143.3	8	0	-	0	0	.
chr5	5456047	5456048	chr5:5456048:G:C	rs1115068	G	C	C	Sox2_MA0143.3	17	0	+	0	0	.
chr5	5491176	5491177	chr5:5491177:T:C	rs4702271	T	C	G	Sox2_MA0143.3	22	0	-	0	0	.
chr5	5535225	5535226	chr5:5535226:A:G	rs2578531	A	G	G	Sox2_MA0143.3	20	0	-	0	0	.
chr5	5536698	5536699	chr5:5536699:A:G	rs2619837	A	G	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr5	5573223	5573224	chr5:5573224:C:T	rs77246439	C	T	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr5	5588585	5588586	chr5:5588586:T:C	rs26426	T	C	C	Sox2_MA0143.3	11	0	+	0	0	.
chr5	5597864	5597865	chr5:5597865:T:G	rs2913316	T	G	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr5	5658719	5658720	chr5:5658720:G:T	rs2081838	G	T	G	Sox2_MA0143.3	7	1	+	8.676919043985553	9.613475778572903	CCATTGTG
chr5	5883506	5883507	chr5:5883507:G:A	rs12516481	G	A	.	Sox2_MA0143.3	25	0	-	0	0	.
chr5	5936554	5936555	chr5:5936555:A:T	rs1174899	A	T	A	Sox2_MA0143.3	23	0	+	0	0	.
chr5	6018594	6018595	chr5:6018595:C:T	rs457815	C	T	C	Sox2_MA0143.3	25	0	+	0	0	.
chr5	6157346	6157347	chr5:6157347:G:C	rs6868727	G	C	G	Sox2_MA0143.3	26	0	-	0	0	.
chr5	6161362	6161363	chr5:6161363:A:T	rs2937802	A	T	A	Sox2_MA0143.3	14	0	+	0	0	.
chr5	6202919	6202920	chr5:6202920:T:C	rs56022004	T	C	T	Sox2_MA0143.3	12	0	+	0	0	.
chr5	6216574	6216575	chr5:6216575:T:C	rs77915720	T	C	T	Sox2_MA0143.3	-15	0	+	0	0	.
chr5	6235763	6235764	chr5:6235764:C:G	rs2925704	C	G	C	Sox2_MA0143.3	-20	0	-	0	0	.
chr5	6246960	6246961	chr5:6246961:G:T	rs2398219	G	T	T	Sox2_MA0143.3	-12	0	+	0	0	.
chr5	6249326	6249327	chr5:6249327:T:C	rs2124935	T	C	T	Sox2_MA0143.3	2	1	+	3.5547341015215945	-2.751084876953981	CCTTTGTA
chr5	6301758	6301759	chr5:6301759:G:A	rs114013262	G	A	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr5	6302049	6302050	chr5:6302050:G:T	rs61036452	G	T	C	Sox2_MA0143.3	14	0	-	0	0	.
chr5	6492173	6492174	chr5:6492174:A:G	rs2895033	A	G	A	Sox2_MA0143.3	-9	0	+	0	0	.
chr5	6512351	6512352	chr5:6512352:C:T	rs4702357	C	T	C	Sox2_MA0143.3	8	0	-	0	0	.
chr5	6572314	6572315	chr5:6572315:T:G	rs693595	T	G	G	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr5	6587357	6587358	chr5:6587358:C:G	rs78726748	C	G	C	Sox2_MA0143.3	27	0	+	0	0	.
chr5	6645745	6645746	chr5:6645746:A:G	rs16877752	A	G	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr5	6668728	6668729	chr5:6668729:C:T	rs3297	C	T	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr5	6730218	6730219	chr5:6730219:A:C	rs274699	A	C	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr5	6748322	6748323	chr5:6748323:G:A	rs552876530	G	A	G	Sox2_MA0143.3	11	0	+	0	0	.
chr5	6770684	6770685	chr5:6770685:C:T	rs876791	C	T	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr5	6826684	6826685	chr5:6826685:G:A	rs275445	G	A	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr5	6828745	6828746	chr5:6828746:T:A	rs10061429	T	A	T	Sox2_MA0143.3	-5	0	-	0	0	.
chr5	6848029	6848030	chr5:6848030:G:A	rs147613116	G	A	A	Sox2_MA0143.3	-13	0	-	0	0	.
chr5	6848035	6848036	chr5:6848036:C:A	rs115297023	C	A	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr5	7017580	7017581	chr5:7017581:G:A	rs901767795	G	A	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr5	7261083	7261084	chr5:7261084:A:G	rs10462834	A	G	A	Sox2_MA0143.3	2	1	-	8.864090315184848	2.5582713367092715	CCTTTGTG
chr5	7302275	7302276	chr5:7302276:C:T	rs55790513	C	T	t	Sox2_MA0143.3	15	0	+	0	0	.
chr5	7402542	7402543	chr5:7402543:T:C	rs10512921	T	C	T	Sox2_MA0143.3	4	1	+	8.676919043985553	1.7681642646703322	CCATTGTG
chr5	7425992	7425993	chr5:7425993:C:T	rs185860132	C	T	C	Sox2_MA0143.3	20	0	+	0	0	.
chr5	7503009	7503010	chr5:7503010:G:A	rs968119	G	A	A	Sox2_MA0143.3	8	0	+	0	0	.
chr5	7515133	7515134	chr5:7515134:T:C	rs569344443	T	C	T	Sox2_MA0143.3	22	0	+	0	0	.
chr5	7516441	7516442	chr5:7516442:C:T	rs17826588	C	T	T	Sox2_MA0143.3	-2	0	-	0	0	.
chr5	7534107	7534108	chr5:7534108:A:G	rs1027579	A	G	A	Sox2_MA0143.3	13	0	+	0	0	.
chr5	7615773	7615774	chr5:7615774:A:G	rs150957834	A	G	A	Sox2_MA0143.3	11	0	+	0	0	.
chr5	7728188	7728189	chr5:7728189:C:T	rs13356716	C	T	C	Sox2_MA0143.3	22	0	+	0	0	.
chr5	7844362	7844363	chr5:7844363:G:C	rs62342524	G	C	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr5	7844389	7844390	chr5:7844390:T:C	rs73737640	T	C	T	Sox2_MA0143.3	9	0	+	0	0	.
chr5	7902411	7902412	chr5:7902412:A:T	rs13166314	A	T	A	Sox2_MA0143.3	10	0	-	0	0	.
chr5	7902561	7902562	chr5:7902562:G:A	rs67514505	G	A	G	Sox2_MA0143.3	-9	0	+	0	0	.
chr5	7941643	7941644	chr5:7941644:G:A	rs97713	G	A	A	Sox2_MA0143.3	-17	0	-	0	0	.
chr5	8010496	8010497	chr5:8010497:A:T	rs2968311	A	T	T	Sox2_MA0143.3	-6	0	+	0	0	.
chr5	8026446	8026447	chr5:8026447:G:T	rs140489542	G	T	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr5	8046778	8046779	chr5:8046779:T:C	rs72727788	T	C	T	Sox2_MA0143.3	-20	0	-	0	0	.
chr5	8060493	8060494	chr5:8060494:G:A	rs113568494	G	A	G	Sox2_MA0143.3	24	0	+	0	0	.
chr5	8139543	8139544	chr5:8139544:G:A	rs7708967	G	A	G	Sox2_MA0143.3	-16	0	-	0	0	.
chr5	8213804	8213805	chr5:8213805:G:C	rs13170406	G	C	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr5	8215407	8215408	chr5:8215408:C:A	rs75906160	C	A	C	Sox2_MA0143.3	13	0	-	0	0	.
chr5	8291116	8291117	chr5:8291117:C:T	rs6887466	C	T	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr5	8317750	8317751	chr5:8317751:T:G	rs74329555	T	G	T	Sox2_MA0143.3	-4	0	-	0	0	.
chr5	8317766	8317767	chr5:8317767:A:G	rs35802668	A	G	A	Sox2_MA0143.3	-20	0	-	0	0	.
chr5	8471658	8471659	chr5:8471659:T:G	rs341886	T	G	G	Sox2_MA0143.3	25	0	-	0	0	.
chr5	8471699	8471700	chr5:8471700:A:G	rs12187827	A	G	A	Sox2_MA0143.3	-16	0	-	0	0	.
chr5	8474432	8474433	chr5:8474433:G:T	rs2388445	G	T	G	Sox2_MA0143.3	1	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr5	8539186	8539187	chr5:8539187:T:G	rs10060670	T	G	T	Sox2_MA0143.3	-20	0	-	0	0	.
chr5	8831601	8831602	chr5:8831602:G:C	rs1857774	G	C	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr5	8873898	8873899	chr5:8873899:C:G	rs17225480	C	G	G	Sox2_MA0143.3	27	0	-	0	0	.
chr5	9060322	9060323	chr5:9060323:T:C	rs11953813	T	C	T	Sox2_MA0143.3	-16	0	+	0	0	.
chr5	9105844	9105845	chr5:9105845:C:T	rs253656	C	T	C	Sox2_MA0143.3	20	0	+	0	0	.
chr5	9131889	9131890	chr5:9131890:A:G	rs17238371	A	G	A	Sox2_MA0143.3	10	0	-	0	0	.
chr5	9157089	9157090	chr5:9157090:G:T	rs988592	G	T	T	Sox2_MA0143.3	-7	0	-	0	0	.
chr5	9160852	9160853	chr5:9160853:C:T	rs3797913	C	T	T	Sox2_MA0143.3	-14	0	-	0	0	.
chr5	9174157	9174158	chr5:9174158:G:C	rs3777277	G	C	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr5	9210622	9210623	chr5:9210623:G:T	rs1806049	G	T	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr5	9215193	9215194	chr5:9215194:A:C	rs1805961	A	C	A	Sox2_MA0143.3	-6	0	-	0	0	.
chr5	9245234	9245235	chr5:9245235:A:G	rs73742614	A	G	A	Sox2_MA0143.3	20	0	+	0	0	.
chr5	9456612	9456613	chr5:9456613:G:A	rs142736852	G	A	G	Sox2_MA0143.3	18	0	-	0	0	.
chr5	9523193	9523194	chr5:9523194:G:A	rs464616	G	A	G	Sox2_MA0143.3	13	0	-	0	0	.
chr5	9547465	9547466	chr5:9547466:G:C	rs113068727	G	C	G	Sox2_MA0143.3	0	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr5	9547471	9547472	chr5:9547472:C:T	rs150951495	C	T	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr5	9553404	9553405	chr5:9553405:A:G	rs6872486	A	G	A	Sox2_MA0143.3	-6	0	+	0	0	.
chr5	9558513	9558514	chr5:9558514:C:T	rs16883147	C	T	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr5	9623993	9623994	chr5:9623994:C:A	rs10513026	C	A	C	Sox2_MA0143.3	17	0	-	0	0	.
chr5	9775203	9775204	chr5:9775204:T:G	rs2905187	T	G	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr5	9790118	9790119	chr5:9790119:G:A	rs72733067	G	A	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr5	9915563	9915564	chr5:9915564:T:G	rs3925078	T	G	T	Sox2_MA0143.3	15	0	-	0	0	.
chr5	10117119	10117120	chr5:10117120:G:A	rs28688773	G	A	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr5	10119458	10119459	chr5:10119459:G:A	rs10077269	G	A	G	Sox2_MA0143.3	24	0	+	0	0	.
chr5	10124179	10124180	chr5:10124180:G:A	rs2662416	G	A	G	Sox2_MA0143.3	17	0	-	0	0	.
chr5	10127324	10127325	chr5:10127325:A:G	rs2658109	A	G	G	Sox2_MA0143.3	4	1	-	8.864090315184848	1.9553355358696274	CCTTTGTG
chr5	10140312	10140313	chr5:10140313:A:C	rs2662407	A	C	C	Sox2_MA0143.3	18	0	-	0	0	.
chr5	10229495	10229496	chr5:10229496:G:A	rs7716217	G	A	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr5	10246897	10246898	chr5:10246898:T:C	rs2548554	T	C	T	Sox2_MA0143.3	14	0	-	0	0	.
chr5	10289855	10289856	chr5:10289856:C:T	rs13168989	C	T	T	Sox2_MA0143.3	17	0	-	0	0	.
chr5	10353367	10353368	chr5:10353368:G:A	rs192810726	G	A	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr5	10490088	10490089	chr5:10490089:T:C	rs1337758375	T	C	T	Sox2_MA0143.3	14	0	+	0	0	.
chr5	10526389	10526390	chr5:10526390:T:C	rs2589669	T	C	T	Sox2_MA0143.3	-2	0	+	0	0	.
chr5	10616777	10616778	chr5:10616778:G:A	rs6883781	G	A	A	Sox2_MA0143.3	-8	0	+	0	0	.
chr5	10661653	10661654	chr5:10661654:G:A	rs1107819	G	A	G	Sox2_MA0143.3	15	0	+	0	0	.
chr5	10689523	10689524	chr5:10689524:A:C	rs3776415	A	C	A	Sox2_MA0143.3	22	0	+	0	0	.
chr5	10713805	10713806	chr5:10713806:G:A	rs2918389	G	A	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr5	10854859	10854860	chr5:10854860:C:T	rs62338980	C	T	C	Sox2_MA0143.3	19	0	+	0	0	.
chr5	10855836	10855837	chr5:10855837:T:C	rs12655346	T	C	C	Sox2_MA0143.3	16	0	-	0	0	.
chr5	10868969	10868970	chr5:10868970:A:G	rs4701887	A	G	G	Sox2_MA0143.3	6	1	-	9.613475778572903	2.7047209992576837	CCATTGTT
chr5	10990230	10990231	chr5:10990231:C:G	rs79955041	C	G	C	Sox2_MA0143.3	5	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr5	11049716	11049717	chr5:11049717:G:A	rs11740371	G	A	G	Sox2_MA0143.3	5	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr5	11169488	11169489	chr5:11169489:T:C	rs16901339	T	C	T	Sox2_MA0143.3	20	0	-	0	0	.
chr5	11224381	11224382	chr5:11224382:G:C	rs32257	G	C	G	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr5	11252208	11252209	chr5:11252209:T:C	rs114143984	T	C	T	Sox2_MA0143.3	3	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr5	11318340	11318341	chr5:11318341:G:A	rs78651141	G	A	G	Sox2_MA0143.3	21	0	+	0	0	.
chr5	11361751	11361752	chr5:11361752:C:T	rs1978462	C	T	T	Sox2_MA0143.3	-3	0	+	0	0	.
chr5	11715346	11715347	chr5:11715347:A:C	rs111312764	A	C	A	Sox2_MA0143.3	9	0	-	0	0	.
chr5	11961394	11961395	chr5:11961395:T:G	rs11957201	T	G	-	Sox2_MA0143.3	-7	0	+	0	0	.
chr5	12017158	12017159	chr5:12017159:C:T	rs73744216	C	T	C	Sox2_MA0143.3	26	0	-	0	0	.
chr5	13331914	13331915	chr5:13331915:G:A	rs62339708	G	A	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr5	13375356	13375357	chr5:13375357:C:T	rs181256271	C	T	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr5	13465794	13465795	chr5:13465795:T:C	rs230076	T	C	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr5	13578942	13578943	chr5:13578943:G:A	rs34324129	G	A	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr5	13637929	13637930	chr5:13637930:T:C	rs2676211	T	C	T	Sox2_MA0143.3	4	1	+	3.5547341015215945	-3.3540206777936254	CCTTTGTA
chr5	14055003	14055004	chr5:14055004:C:T	rs6554838	C	T	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr5	14144538	14144539	chr5:14144539:T:G	rs374332352	T	G	T	Sox2_MA0143.3	4	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr5	14151689	14151690	chr5:14151690:T:C	rs6554843	T	C	T	Sox2_MA0143.3	3	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr5	14179211	14179212	chr5:14179212:G:T	rs13184670	G	T	G	Sox2_MA0143.3	14	0	+	0	0	.
chr5	14288836	14288837	chr5:14288837:C:T	rs706271	C	T	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr5	14328531	14328532	chr5:14328532:G:C	rs30622	G	C	C	Sox2_MA0143.3	0	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr5	14415480	14415481	chr5:14415481:A:G	rs6883134	A	G	A	Sox2_MA0143.3	-2	0	-	0	0	.
chr5	14560044	14560045	chr5:14560045:A:C	rs32630	A	C	A	Sox2_MA0143.3	-4	0	+	0	0	.
chr5	14685438	14685439	chr5:14685439:A:G	rs250440	A	G	A	Sox2_MA0143.3	8	0	-	0	0	.
chr5	14926912	14926913	chr5:14926913:G:A	rs865036	G	A	G	Sox2_MA0143.3	8	0	+	0	0	.
chr5	14954427	14954428	chr5:14954428:C:T	rs116520850	C	T	C	Sox2_MA0143.3	5	1	-	9.613475778572903	2.7047209992576837	CCATTGTT
chr5	15015169	15015170	chr5:15015170:G:T	chr5:15015170:G:T	G	T	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr5	15241508	15241509	chr5:15241509:A:G	rs2438385	A	G	A	Sox2_MA0143.3	-14	0	-	0	0	.
chr5	15363493	15363494	chr5:15363494:G:A	rs79908129	G	A	A	Sox2_MA0143.3	-16	0	+	0	0	.
chr5	15687606	15687607	chr5:15687607:G:A	rs16867548	G	A	G	Sox2_MA0143.3	26	0	+	0	0	.
chr5	15750395	15750396	chr5:15750396:A:G	rs2937073	A	G	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr5	15853988	15853989	chr5:15853989:A:G	rs257741	A	G	G	Sox2_MA0143.3	16	0	-	0	0	.
chr5	16082122	16082123	chr5:16082123:T:A	rs55838047	T	A	T	Sox2_MA0143.3	14	0	-	0	0	.
chr5	16187929	16187930	chr5:16187930:A:G	rs750384560	A	G	A	Sox2_MA0143.3	8	0	+	0	0	.
chr5	16467361	16467362	chr5:16467362:T:A	chr5:16467362:T:A	T	A	T	Sox2_MA0143.3	-14	0	+	0	0	.
chr5	16547536	16547537	chr5:16547537:G:A	rs12187057	G	A	A	Sox2_MA0143.3	-15	0	-	0	0	.
chr5	16584117	16584118	chr5:16584118:A:G	rs2451855	A	G	A	Sox2_MA0143.3	3	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr5	16609761	16609762	chr5:16609762:C:G	rs1035869	C	G	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr5	16706656	16706657	chr5:16706657:A:G	rs27878	A	G	A	Sox2_MA0143.3	6	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr5	16740220	16740221	chr5:16740221:G:C	rs10051558	G	C	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr5	16740235	16740236	chr5:16740236:C:G	rs79194984	C	G	C	Sox2_MA0143.3	0	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr5	16754663	16754664	chr5:16754664:G:A	rs768292735	G	A	G	Sox2_MA0143.3	7	1	-	9.206767037375712	9.800647049772198	CCTTTGTC
chr5	16758459	16758460	chr5:16758460:T:C	rs250340	T	C	T	Sox2_MA0143.3	14	0	-	0	0	.
chr5	16855631	16855632	chr5:16855632:C:T	rs147922981	C	T	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr5	16869786	16869787	chr5:16869787:C:T	rs71609330	C	T	C	Sox2_MA0143.3	14	0	-	0	0	.
chr5	16881417	16881418	chr5:16881418:T:C	rs550419678	T	C	T	Sox2_MA0143.3	25	0	+	0	0	.
chr5	16901328	16901329	chr5:16901329:G:A	rs2560845	G	A	G	Sox2_MA0143.3	15	0	+	0	0	.
chr5	16930624	16930625	chr5:16930625:A:G	rs31453	A	G	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr5	16930651	16930652	chr5:16930652:A:C	rs31454	A	C	A	Sox2_MA0143.3	11	0	+	0	0	.
chr5	16933527	16933528	chr5:16933528:T:C	rs31463	T	C	T	Sox2_MA0143.3	2	1	-	8.676919043985553	2.5582713367092715	CCATTGTG
chr5	16935813	16935814	chr5:16935814:C:G	rs142469364	C	G	C	Sox2_MA0143.3	9	0	+	0	0	.
chr5	16936037	16936038	chr5:16936038:T:A	rs970997294	T	A	T	Sox2_MA0143.3	17	0	+	0	0	.
chr5	16970243	16970244	chr5:16970244:C:T	rs249118	C	T	c	Sox2_MA0143.3	8	0	+	0	0	.
chr5	17038057	17038058	chr5:17038058:C:T	rs12653885	C	T	C	Sox2_MA0143.3	8	0	+	0	0	.
chr5	17046531	17046532	chr5:17046532:C:G	rs571955648	C	G	c	Sox2_MA0143.3	13	0	-	0	0	.
chr5	17056141	17056142	chr5:17056142:T:C	rs12187713	T	C	T	Sox2_MA0143.3	-20	0	+	0	0	.
chr5	17079699	17079700	chr5:17079700:C:T	chr5:17079700:C:T	C	T	C	Sox2_MA0143.3	13	0	-	0	0	.
chr5	17114594	17114595	chr5:17114595:G:A	rs1482345	G	A	G	Sox2_MA0143.3	22	0	+	0	0	.
chr5	17123165	17123166	chr5:17123166:A:C	rs968746906	A	C	A	Sox2_MA0143.3	25	0	-	0	0	.
chr5	17146237	17146238	chr5:17146238:G:A	rs617089	G	A	A	Sox2_MA0143.3	15	0	+	0	0	.
chr5	17219292	17219293	chr5:17219293:C:T	rs941273738	C	T	C	Sox2_MA0143.3	13	0	-	0	0	.
chr5	17225002	17225003	chr5:17225003:T:C	rs116226031	T	C	T	Sox2_MA0143.3	13	0	+	0	0	.
chr5	17263986	17263987	chr5:17263987:G:A	rs1500508	G	A	G	Sox2_MA0143.3	22	0	-	0	0	.
chr5	17374351	17374352	chr5:17374352:T:A	rs114056754	T	A	T	Sox2_MA0143.3	8	0	-	0	0	.
chr5	17406551	17406552	chr5:17406552:G:A	rs1510963	G	A	G	Sox2_MA0143.3	16	0	-	0	0	.
chr5	17708548	17708549	chr5:17708549:A:T	rs1514849	A	T	A	Sox2_MA0143.3	-6	0	+	0	0	.
chr5	17989146	17989147	chr5:17989147:G:A	rs10520854	G	A	G	Sox2_MA0143.3	20	0	-	0	0	.
chr5	18110897	18110898	chr5:18110898:G:A	rs542405156	G	A	G	Sox2_MA0143.3	-11	0	+	0	0	.
chr5	18110967	18110968	chr5:18110968:G:A	rs315872	G	A	G	Sox2_MA0143.3	14	0	+	0	0	.
chr5	18198096	18198097	chr5:18198097:G:C	rs75692276	G	C	G	Sox2_MA0143.3	7	1	+	8.864090315184848	9.206767037375712	CCTTTGTG
chr5	18334932	18334933	chr5:18334933:C:T	rs2036328	C	T	T	Sox2_MA0143.3	5	1	-	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr5	18380932	18380933	chr5:18380933:A:C	rs116610235	A	C	A	Sox2_MA0143.3	-15	0	-	0	0	.
chr5	18393404	18393405	chr5:18393405:C:A	rs1918342	C	A	A	Sox2_MA0143.3	11	0	+	0	0	.
chr5	18733449	18733450	chr5:18733450:G:A	rs10073343	G	A	G	Sox2_MA0143.3	8	0	-	0	0	.
chr5	18800536	18800537	chr5:18800537:G:C	rs7703575	G	C	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr5	18800579	18800580	chr5:18800580:C:G	rs55904323	C	G	C	Sox2_MA0143.3	24	0	+	0	0	.
chr5	18847373	18847374	chr5:18847374:G:A	rs2101899	G	A	A	Sox2_MA0143.3	-13	0	+	0	0	.
chr5	18918599	18918600	chr5:18918600:G:T	rs57396939	G	T	G	Sox2_MA0143.3	12	0	-	0	0	.
chr5	18985628	18985629	chr5:18985629:C:T	rs11747098	C	T	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr5	19019434	19019435	chr5:19019435:C:A	rs4128239	C	A	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr5	19133765	19133766	chr5:19133766:G:A	rs66800742	G	A	G	Sox2_MA0143.3	26	0	+	0	0	.
chr5	19211079	19211080	chr5:19211080:C:T	rs7727591	C	T	C	Sox2_MA0143.3	10	0	+	0	0	.
chr5	19511932	19511933	chr5:19511933:T:C	rs418681	T	C	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr5	19902843	19902844	chr5:19902844:T:C	rs12658322	T	C	T	Sox2_MA0143.3	-17	0	+	0	0	.
chr5	20230179	20230180	chr5:20230180:G:C	rs17225124	G	C	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr5	20572781	20572782	chr5:20572782:A:C	rs2434778	A	C	A	Sox2_MA0143.3	-6	0	-	0	0	.
chr5	20721489	20721490	chr5:20721490:T:A	rs565632528	T	A	-	Sox2_MA0143.3	-1	0	+	0	0	.
chr5	21062636	21062637	chr5:21062637:C:A	rs10059655	C	A	A	Sox2_MA0143.3	-10	0	+	0	0	.
chr5	21760492	21760493	chr5:21760493:C:A	rs2303748	C	A	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr5	22164389	22164390	chr5:22164390:G:A	rs4521438	G	A	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr5	22325601	22325602	chr5:22325602:A:C	rs6452079	A	C	C	Sox2_MA0143.3	-5	0	-	0	0	.
chr5	22496676	22496677	chr5:22496677:G:A	rs271101	G	A	A	Sox2_MA0143.3	-8	0	-	0	0	.
chr5	22501551	22501552	chr5:22501552:C:T	rs72744896	C	T	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr5	22625838	22625839	chr5:22625839:C:A	rs268996	C	A	C	Sox2_MA0143.3	16	0	+	0	0	.
chr5	22626177	22626178	chr5:22626178:C:A	rs72637727	C	A	C	Sox2_MA0143.3	9	0	+	0	0	.
chr5	22655755	22655756	chr5:22655756:C:A	rs12521573	C	A	C	Sox2_MA0143.3	21	0	+	0	0	.
chr5	22707093	22707094	chr5:22707094:C:T	rs174873	C	T	T	Sox2_MA0143.3	10	0	+	0	0	.
chr5	22976321	22976322	chr5:22976322:G:C	rs10461808	G	C	G	Sox2_MA0143.3	-12	0	+	0	0	.
chr5	23168352	23168353	chr5:23168353:C:T	rs4701346	C	T	T	Sox2_MA0143.3	1	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr5	23411424	23411425	chr5:23411425:G:A	rs71611248	G	A	A	Sox2_MA0143.3	-7	0	+	0	0	.
chr5	23411427	23411428	chr5:23411428:A:C	rs71611249	A	C	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr5	23507667	23507668	chr5:23507668:T:C	rs2914282	T	C	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr5	23816896	23816897	chr5:23816897:G:C	rs12519970	G	C	G	Sox2_MA0143.3	0	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr5	23823793	23823794	chr5:23823794:G:A	rs73743073	G	A	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr5	23823822	23823823	chr5:23823823:A:G	rs10066234	A	G	A	Sox2_MA0143.3	19	0	+	0	0	.
chr5	24181024	24181025	chr5:24181025:T:A	rs41526844	T	A	T	Sox2_MA0143.3	14	0	+	0	0	.
chr5	24181081	24181082	chr5:24181082:T:G	chr5:24181082:T:G	T	G	T	Sox2_MA0143.3	21	0	-	0	0	.
chr5	24181082	24181083	chr5:24181083:C:T	chr5:24181083:C:T	C	T	C	Sox2_MA0143.3	20	0	-	0	0	.
chr5	24249374	24249375	chr5:24249375:T:A	rs56310750	T	A	T	Sox2_MA0143.3	6	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr5	24850970	24850971	chr5:24850971:T:G	rs13173735	T	G	T	Sox2_MA0143.3	2	1	+	9.800647049772198	3.494828071296623	CCTTTGTT
chr5	24893388	24893389	chr5:24893389:C:T	rs1586924	C	T	T	Sox2_MA0143.3	-11	0	-	0	0	.
chr5	25191130	25191131	chr5:25191131:T:A	rs72755889	T	A	T	Sox2_MA0143.3	20	0	+	0	0	.
chr5	25539558	25539559	chr5:25539559:C:T	rs72757528	C	T	T	Sox2_MA0143.3	-20	0	-	0	0	.
chr5	25807497	25807498	chr5:25807498:T:C	rs397660	T	C	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr5	25963887	25963888	chr5:25963888:T:C	rs78733654	T	C	C	Sox2_MA0143.3	15	0	+	0	0	.
chr5	26034950	26034951	chr5:26034951:C:G	rs7721203	C	G	C	Sox2_MA0143.3	27	0	-	0	0	.
chr5	26172796	26172797	chr5:26172797:T:C	rs13173199	T	C	C	Sox2_MA0143.3	6	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr5	26231824	26231825	chr5:26231825:A:G	rs4604153	A	G	A	Sox2_MA0143.3	2	1	+	9.019595766176417	2.900948058900136	CCATTGTC
chr5	26624030	26624031	chr5:26624031:C:A	rs7717122	C	A	C	Sox2_MA0143.3	0	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr5	27434500	27434501	chr5:27434501:A:G	rs66701456	A	G	G	Sox2_MA0143.3	23	0	+	0	0	.
chr5	27652851	27652852	chr5:27652852:A:G	rs10472577	A	G	G	Sox2_MA0143.3	-9	0	+	0	0	.
chr5	27855691	27855692	chr5:27855692:T:C	rs10075309	T	C	T	Sox2_MA0143.3	-14	0	+	0	0	.
chr5	27855717	27855718	chr5:27855718:C:T	rs62351639	C	T	C	Sox2_MA0143.3	12	0	+	0	0	.
chr5	27855726	27855727	chr5:27855727:C:G	rs13157999	C	G	C	Sox2_MA0143.3	21	0	+	0	0	.
chr5	27939566	27939567	chr5:27939567:T:A	rs1428598	T	A	T	Sox2_MA0143.3	17	0	+	0	0	.
chr5	28157171	28157172	chr5:28157172:G:A	rs12519947	G	A	g	Sox2_MA0143.3	24	0	+	0	0	.
chr5	28398038	28398039	chr5:28398039:A:G	rs4867146	A	G	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr5	28681970	28681971	chr5:28681971:C:T	rs13359491	C	T	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr5	28991604	28991605	chr5:28991605:G:A	rs147273083	G	A	G	Sox2_MA0143.3	11	0	-	0	0	.
chr5	29175950	29175951	chr5:29175951:A:C	rs10079566	A	C	C	Sox2_MA0143.3	-12	0	-	0	0	.
chr5	29188488	29188489	chr5:29188489:G:A	rs111652724	G	A	-	Sox2_MA0143.3	13	0	-	0	0	.
chr5	29299571	29299572	chr5:29299572:C:A	rs139500671	C	A	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr5	29367366	29367367	chr5:29367367:C:T	rs7717780	C	T	T	Sox2_MA0143.3	-13	0	-	0	0	.
chr5	29367372	29367373	chr5:29367373:A:C	rs71621784	A	C	A	Sox2_MA0143.3	-19	0	-	0	0	.
chr5	29390582	29390583	chr5:29390583:C:T	rs4867174	C	T	c	Sox2_MA0143.3	-1	0	+	0	0	.
chr5	29633869	29633870	chr5:29633870:T:C	rs72757561	T	C	T	Sox2_MA0143.3	21	0	+	0	0	.
chr5	29635184	29635185	chr5:29635185:A:T	rs1350216	A	T	T	Sox2_MA0143.3	19	0	+	0	0	.
chr5	30050629	30050630	chr5:30050630:G:T	rs62350695	G	T	T	Sox2_MA0143.3	27	0	+	0	0	.
chr5	30106858	30106859	chr5:30106859:C:A	rs4312894	C	A	C	Sox2_MA0143.3	7	1	-	8.864090315184848	9.800647049772198	CCTTTGTG
chr5	30203497	30203498	chr5:30203498:T:C	rs56410637	T	C	T	Sox2_MA0143.3	20	0	-	0	0	.
chr5	30505719	30505720	chr5:30505720:T:C	rs10940900	T	C	T	Sox2_MA0143.3	12	0	-	0	0	.
chr5	30827425	30827426	chr5:30827426:C:A	rs6450810	C	A	C	Sox2_MA0143.3	7	1	-	8.676919043985553	9.613475778572903	CCATTGTG
chr5	30827430	30827431	chr5:30827431:T:C	rs6450811	T	C	C	Sox2_MA0143.3	2	1	-	8.676919043985553	2.5582713367092715	CCATTGTG
chr5	30907291	30907292	chr5:30907292:C:G	rs1500172	C	G	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr5	31036624	31036625	chr5:31036625:C:T	rs72745882	C	T	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr5	31213993	31213994	chr5:31213994:G:A	rs35078875	G	A	G	Sox2_MA0143.3	26	0	+	0	0	.
chr5	31221174	31221175	chr5:31221175:G:A	rs72749646	G	A	G	Sox2_MA0143.3	17	0	+	0	0	.
chr5	31237785	31237786	chr5:31237786:G:A	rs113647480	G	A	G	Sox2_MA0143.3	-16	0	-	0	0	.
chr5	31269037	31269038	chr5:31269038:C:T	rs149882127	C	T	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr5	31365886	31365887	chr5:31365887:C:T	rs116682738	C	T	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr5	31395389	31395390	chr5:31395390:T:C	rs2330693	T	C	t	Sox2_MA0143.3	-18	0	-	0	0	.
chr5	31397282	31397283	chr5:31397283:C:T	rs13167203	C	T	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr5	31410500	31410501	chr5:31410501:T:C	rs12186785	T	C	T	Sox2_MA0143.3	-19	0	-	0	0	.
chr5	31691682	31691683	chr5:31691683:G:A	rs489804	G	A	G	Sox2_MA0143.3	15	0	-	0	0	.
chr5	31702185	31702186	chr5:31702186:T:A	rs141599796	T	A	T	Sox2_MA0143.3	-20	0	+	0	0	.
chr5	31720510	31720511	chr5:31720511:G:A	rs56171147	G	A	A	Sox2_MA0143.3	-16	0	-	0	0	.
chr5	31758446	31758447	chr5:31758447:C:T	rs61599534	C	T	C	Sox2_MA0143.3	-5	0	-	0	0	.
chr5	31786154	31786155	chr5:31786155:T:C	rs13362096	T	C	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr5	31786519	31786520	chr5:31786520:T:C	rs13362167	T	C	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr5	31898367	31898368	chr5:31898368:C:T	rs75007332	C	T	C	Sox2_MA0143.3	15	0	-	0	0	.
chr5	31898374	31898375	chr5:31898375:G:A	rs11747917	G	A	G	Sox2_MA0143.3	8	0	-	0	0	.
chr5	31940261	31940262	chr5:31940262:T:G	chr5:31940262:T:G	T	G	T	Sox2_MA0143.3	3	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr5	31978783	31978784	chr5:31978784:C:T	rs115572844	C	T	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr5	32028122	32028123	chr5:32028123:A:T	rs7723301	A	T	A	Sox2_MA0143.3	21	0	-	0	0	.
chr5	32047556	32047557	chr5:32047557:C:T	rs323826	C	T	T	Sox2_MA0143.3	10	0	-	0	0	.
chr5	32203882	32203883	chr5:32203883:T:C	rs114679815	T	C	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr5	32276609	32276610	chr5:32276610:A:G	rs73754427	A	G	A	Sox2_MA0143.3	-15	0	-	0	0	.
chr5	32329627	32329628	chr5:32329628:C:T	chr5:32329628:C:T	C	T	c	Sox2_MA0143.3	20	0	-	0	0	.
chr5	32329663	32329664	chr5:32329664:C:T	rs116396666	C	T	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr5	32332073	32332074	chr5:32332074:C:T	rs13436901	C	T	C	Sox2_MA0143.3	27	0	-	0	0	.
chr5	32439217	32439218	chr5:32439218:A:G	rs641221	A	G	A	Sox2_MA0143.3	-14	0	-	0	0	.
chr5	32615185	32615186	chr5:32615186:C:A	rs11749724	C	A	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr5	32628995	32628996	chr5:32628996:T:C	rs6898310	T	C	C	Sox2_MA0143.3	19	0	-	0	0	.
chr5	32640245	32640246	chr5:32640246:G:C	rs115022260	G	C	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr5	32785748	32785749	chr5:32785749:G:A	rs115848751	G	A	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr5	32791214	32791215	chr5:32791215:G:A	rs905206	G	A	A	Sox2_MA0143.3	-8	0	+	0	0	.
chr5	32852712	32852713	chr5:32852713:C:T	rs139476457	C	T	C	Sox2_MA0143.3	8	0	+	0	0	.
chr5	32959988	32959989	chr5:32959989:C:A	rs10074185	C	A	C	Sox2_MA0143.3	20	0	-	0	0	.
chr5	33079235	33079236	chr5:33079236:A:G	rs1813207	A	G	A	Sox2_MA0143.3	13	0	-	0	0	.
chr5	33108579	33108580	chr5:33108580:T:C	rs6450943	T	C	C	Sox2_MA0143.3	22	0	-	0	0	.
chr5	33237319	33237320	chr5:33237320:T:C	rs12189050	T	C	T	Sox2_MA0143.3	2	1	-	9.613475778572903	3.494828071296623	CCATTGTT
chr5	33271739	33271740	chr5:33271740:T:G	rs73758640	T	G	T	Sox2_MA0143.3	12	0	-	0	0	.
chr5	33277599	33277600	chr5:33277600:A:G	rs436219	A	G	A	Sox2_MA0143.3	19	0	-	0	0	.
chr5	33319476	33319477	chr5:33319477:C:T	rs13165106	C	T	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr5	33328642	33328643	chr5:33328643:G:C	rs372197268	G	C	G	Sox2_MA0143.3	1	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr5	33446125	33446126	chr5:33446126:G:C	rs73074376	G	C	G	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr5	33516670	33516671	chr5:33516671:G:C	rs35142004	G	C	G	Sox2_MA0143.3	21	0	+	0	0	.
chr5	33602969	33602970	chr5:33602970:G:A	rs10472872	G	A	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr5	33612611	33612612	chr5:33612612:A:G	rs58085989	A	G	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr5	33622052	33622053	chr5:33622053:T:C	rs9791011	T	C	C	Sox2_MA0143.3	14	0	-	0	0	.
chr5	33642519	33642520	chr5:33642520:A:C	rs6861765	A	C	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr5	33687534	33687535	chr5:33687535:T:C	rs7719969	T	C	T	Sox2_MA0143.3	-15	0	-	0	0	.
chr5	33720161	33720162	chr5:33720162:C:T	rs1423477	C	T	c	Sox2_MA0143.3	10	0	-	0	0	.
chr5	33788801	33788802	chr5:33788802:C:T	rs146994702	C	T	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr5	34015575	34015576	chr5:34015576:T:C	rs840399	T	C	C	Sox2_MA0143.3	2	1	-	9.019595766176417	2.900948058900136	CCATTGTC
chr5	34181411	34181412	chr5:34181412:G:A	rs1326302206	G	A	N	Sox2_MA0143.3	-5	0	-	0	0	.
chr5	34189338	34189339	chr5:34189339:G:A	rs796437331	G	A	N	Sox2_MA0143.3	-14	0	+	0	0	.
chr5	34257203	34257204	chr5:34257204:C:T	rs4002047	C	T	N	Sox2_MA0143.3	27	0	-	0	0	.
chr5	34300106	34300107	chr5:34300107:C:A	rs4703461	C	A	c	Sox2_MA0143.3	12	0	+	0	0	.
chr5	34477550	34477551	chr5:34477551:T:C	rs7446013	T	C	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr5	34486104	34486105	chr5:34486105:G:T	rs16902287	G	T	G	Sox2_MA0143.3	-5	0	+	0	0	.
chr5	34504171	34504172	chr5:34504172:G:A	rs13157326	G	A	G	Sox2_MA0143.3	16	0	-	0	0	.
chr5	34509545	34509546	chr5:34509546:T:C	rs114996999	T	C	T	Sox2_MA0143.3	10	0	-	0	0	.
chr5	34547798	34547799	chr5:34547799:G:A	rs76177494	G	A	G	Sox2_MA0143.3	-14	0	+	0	0	.
chr5	34550984	34550985	chr5:34550985:C:T	rs6865733	C	T	C	Sox2_MA0143.3	23	0	+	0	0	.
chr5	34554922	34554923	chr5:34554923:G:A	rs75086496	G	A	G	Sox2_MA0143.3	17	0	+	0	0	.
chr5	34618981	34618982	chr5:34618982:T:C	rs256317	T	C	C	Sox2_MA0143.3	8	0	-	0	0	.
chr5	34621745	34621746	chr5:34621746:A:G	rs962435	A	G	A	Sox2_MA0143.3	20	0	-	0	0	.
chr5	34660614	34660615	chr5:34660615:A:G	rs115364913	A	G	A	Sox2_MA0143.3	20	0	-	0	0	.
chr5	34674524	34674525	chr5:34674525:T:C	rs76921940	T	C	T	Sox2_MA0143.3	-16	0	+	0	0	.
chr5	34692402	34692403	chr5:34692403:T:C	rs11748277	T	C	C	Sox2_MA0143.3	21	0	-	0	0	.
chr5	34762060	34762061	chr5:34762061:A:G	rs164311	A	G	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr5	34806209	34806210	chr5:34806210:C:G	rs163122	C	G	G	Sox2_MA0143.3	5	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr5	35004307	35004308	chr5:35004308:C:T	rs78078037	C	T	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr5	35129518	35129519	chr5:35129519:C:G	rs67378061	C	G	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr5	35164718	35164719	chr5:35164719:A:G	rs16872490	A	G	G	Sox2_MA0143.3	18	0	-	0	0	.
chr5	35172646	35172647	chr5:35172647:G:A	rs34101526	G	A	A	Sox2_MA0143.3	20	0	+	0	0	.
chr5	35210219	35210220	chr5:35210220:C:T	rs34024951	C	T	C	Sox2_MA0143.3	11	0	+	0	0	.
chr5	35213911	35213912	chr5:35213912:G:A	rs369370507	G	A	G	Sox2_MA0143.3	-11	0	+	0	0	.
chr5	35214508	35214509	chr5:35214509:C:T	rs73078894	C	T	C	Sox2_MA0143.3	14	0	+	0	0	.
chr5	35229969	35229970	chr5:35229970:G:A	chr5:35229970:G:A	G	A	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr5	35229969	35229970	chr5:35229970:G:C	rs79065092	G	C	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr5	35229972	35229973	chr5:35229973:C:A	rs9292578	C	A	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr5	35319881	35319882	chr5:35319882:T:C	rs75039485	T	C	T	Sox2_MA0143.3	-2	0	-	0	0	.
chr5	35374738	35374739	chr5:35374739:T:G	rs11739457	T	G	T	Sox2_MA0143.3	2	1	+	8.864090315184848	2.5582713367092715	CCTTTGTG
chr5	35469626	35469627	chr5:35469627:T:C	rs284742	T	C	T	Sox2_MA0143.3	12	0	+	0	0	.
chr5	35483471	35483472	chr5:35483472:A:G	rs73088321	A	G	A	Sox2_MA0143.3	-9	0	-	0	0	.
chr5	35533348	35533349	chr5:35533349:C:G	rs7724804	C	G	G	Sox2_MA0143.3	-11	0	+	0	0	.
chr5	35583242	35583243	chr5:35583243:A:C	rs781065044	A	C	a	Sox2_MA0143.3	9	0	-	0	0	.
chr5	35702362	35702363	chr5:35702363:A:G	rs560328090	A	G	A	Sox2_MA0143.3	-19	0	+	0	0	.
chr5	35825382	35825383	chr5:35825383:C:A	rs4263525	C	A	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr5	35879480	35879481	chr5:35879481:G:A	rs72742450	G	A	G	Sox2_MA0143.3	20	0	+	0	0	.
chr5	35884184	35884185	chr5:35884185:C:A	rs151222674	C	A	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr5	36013333	36013334	chr5:36013334:C:T	rs7716416	C	T	c	Sox2_MA0143.3	-19	0	-	0	0	.
chr5	36030041	36030042	chr5:36030042:A:G	rs3910963	A	G	A	Sox2_MA0143.3	21	0	-	0	0	.
chr5	36228137	36228138	chr5:36228138:G:C	rs9292621	G	C	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr5	36439475	36439476	chr5:36439476:G:C	rs67311909	G	C	G	Sox2_MA0143.3	1	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr5	36450509	36450510	chr5:36450510:C:T	rs7709504	C	T	C	Sox2_MA0143.3	25	0	+	0	0	.
chr5	36502641	36502642	chr5:36502642:A:G	rs4358550	A	G	G	Sox2_MA0143.3	3	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr5	36502645	36502646	chr5:36502646:C:T	rs2956584	C	T	T	Sox2_MA0143.3	-1	0	-	0	0	.
chr5	36503610	36503611	chr5:36503611:G:A	rs2967056	G	A	G	Sox2_MA0143.3	20	0	-	0	0	.
chr5	36616432	36616433	chr5:36616433:A:G	rs1366638	A	G	G	Sox2_MA0143.3	27	0	+	0	0	.
chr5	36739396	36739397	chr5:36739397:G:A	rs6869867	G	A	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr5	36739800	36739801	chr5:36739801:A:C	rs79297053	A	C	A	Sox2_MA0143.3	10	0	-	0	0	.
chr5	36739810	36739811	chr5:36739811:G:C	rs140226755	G	C	G	Sox2_MA0143.3	0	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr5	37099715	37099716	chr5:37099716:C:T	rs10052646	C	T	C	Sox2_MA0143.3	19	0	-	0	0	.
chr5	37555460	37555461	chr5:37555461:C:A	rs12652658	C	A	C	Sox2_MA0143.3	26	0	+	0	0	.
chr5	37989105	37989106	chr5:37989106:T:C	rs72730673	T	C	T	Sox2_MA0143.3	4	1	+	9.800647049772198	2.8918922704569785	CCTTTGTT
chr5	38005298	38005299	chr5:38005299:T:C	rs12189379	T	C	C	Sox2_MA0143.3	6	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr5	38049637	38049638	chr5:38049638:C:T	rs7705709	C	T	C	Sox2_MA0143.3	10	0	-	0	0	.
chr5	38380846	38380847	chr5:38380847:T:C	rs79112703	T	C	T	Sox2_MA0143.3	27	0	+	0	0	.
chr5	38410500	38410501	chr5:38410501:G:A	rs66582764	G	A	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr5	38466415	38466416	chr5:38466416:C:A	rs114116364	C	A	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr5	38564074	38564075	chr5:38564075:A:G	rs33930730	A	G	A	Sox2_MA0143.3	21	0	+	0	0	.
chr5	38600970	38600971	chr5:38600971:G:A	rs1562134	G	A	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr5	38695636	38695637	chr5:38695637:C:T	rs11956860	C	T	C	Sox2_MA0143.3	18	0	-	0	0	.
chr5	38715891	38715892	chr5:38715892:T:C	rs73749532	T	C	T	Sox2_MA0143.3	10	0	+	0	0	.
chr5	38831106	38831107	chr5:38831107:C:T	rs475485	C	T	T	Sox2_MA0143.3	-4	0	+	0	0	.
chr5	38930991	38930992	chr5:38930992:T:C	rs79485375	T	C	T	Sox2_MA0143.3	13	0	+	0	0	.
chr5	39143345	39143346	chr5:39143346:T:C	rs10061639	T	C	C	Sox2_MA0143.3	25	0	+	0	0	.
chr5	39405631	39405632	chr5:39405632:A:G	rs115000305	A	G	A	Sox2_MA0143.3	-14	0	-	0	0	.
chr5	39405633	39405634	chr5:39405634:C:T	rs3843908	C	T	T	Sox2_MA0143.3	-16	0	-	0	0	.
chr5	39425349	39425350	chr5:39425350:T:C	rs375752939	T	C	T	Sox2_MA0143.3	20	0	-	0	0	.
chr5	39526339	39526340	chr5:39526340:A:G	rs989248	A	G	G	Sox2_MA0143.3	-2	0	+	0	0	.
chr5	39544835	39544836	chr5:39544836:T:A	rs78016580	T	A	T	Sox2_MA0143.3	-13	0	-	0	0	.
chr5	39649058	39649059	chr5:39649059:C:T	rs7709096	C	T	T	Sox2_MA0143.3	24	0	-	0	0	.
chr5	39656792	39656793	chr5:39656793:G:A	rs13170944	G	A	G	Sox2_MA0143.3	-12	0	+	0	0	.
chr5	40058026	40058027	chr5:40058027:T:C	rs13161247	T	C	T	Sox2_MA0143.3	25	0	+	0	0	.
chr5	40151006	40151007	chr5:40151007:G:T	rs1427746	G	T	T	Sox2_MA0143.3	17	0	-	0	0	.
chr5	40189050	40189051	chr5:40189051:C:G	rs353376	C	G	C	Sox2_MA0143.3	5	1	-	8.676919043985553	1.7681642646703324	CCATTGTG
chr5	40274355	40274356	chr5:40274356:A:G	rs2120857	A	G	g	Sox2_MA0143.3	-11	0	-	0	0	.
chr5	40365616	40365617	chr5:40365617:T:G	rs192253955	T	G	T	Sox2_MA0143.3	9	0	-	0	0	.
chr5	40365618	40365619	chr5:40365619:T:A	rs75248677	T	A	T	Sox2_MA0143.3	7	1	-	3.5547341015215945	9.800647049772198	CCTTTGTA
chr5	40409897	40409898	chr5:40409898:A:T	rs189932638	A	T	A	Sox2_MA0143.3	-12	0	+	0	0	.
chr5	40434040	40434041	chr5:40434041:C:T	rs943305793	C	T	C	Sox2_MA0143.3	7	1	-	8.676919043985553	3.3675628303222993	CCATTGTG
chr5	40439361	40439362	chr5:40439362:G:C	rs10473195	G	C	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr5	40578819	40578820	chr5:40578820:T:C	rs1122433	T	C	C	Sox2_MA0143.3	-20	0	-	0	0	.
chr5	40619125	40619126	chr5:40619126:C:G	rs11958167	C	G	C	Sox2_MA0143.3	12	0	+	0	0	.
chr5	40623025	40623026	chr5:40623026:C:T	rs1354674	C	T	T	Sox2_MA0143.3	8	0	+	0	0	.
chr5	40646457	40646458	chr5:40646458:G:T	rs7716982	G	T	T	Sox2_MA0143.3	20	0	-	0	0	.
chr5	40675863	40675864	chr5:40675864:G:T	rs79272198	G	T	G	Sox2_MA0143.3	1	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr5	40754699	40754700	chr5:40754700:C:A	rs112883864	C	A	C	Sox2_MA0143.3	5	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr5	40924963	40924964	chr5:40924964:C:T	rs28834109	C	T	T	Sox2_MA0143.3	-5	0	+	0	0	.
chr5	40924990	40924991	chr5:40924991:T:G	rs28770573	T	G	T	Sox2_MA0143.3	22	0	+	0	0	.
chr5	40933050	40933051	chr5:40933051:C:T	rs3792642	C	T	C	Sox2_MA0143.3	23	0	-	0	0	.
chr5	41183081	41183082	chr5:41183082:T:C	rs550247363	T	C	T	Sox2_MA0143.3	-10	0	+	0	0	.
chr5	41192896	41192897	chr5:41192897:A:C	rs4957377	A	C	A	Sox2_MA0143.3	19	0	-	0	0	.
chr5	41302712	41302713	chr5:41302713:G:A	rs320614	G	A	a	Sox2_MA0143.3	1	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr5	41335015	41335016	chr5:41335016:A:G	rs16871220	A	G	G	Sox2_MA0143.3	11	0	-	0	0	.
chr5	41395966	41395967	chr5:41395967:C:A	rs4051076	C	A	C	Sox2_MA0143.3	24	0	-	0	0	.
chr5	41504545	41504546	chr5:41504546:G:C	rs17207595	G	C	G	Sox2_MA0143.3	1	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr5	41504548	41504549	chr5:41504549:T:A	rs661518	T	A	T	Sox2_MA0143.3	-2	0	-	0	0	.
chr5	41600815	41600816	chr5:41600816:C:T	rs6867292	C	T	C	Sox2_MA0143.3	22	0	+	0	0	.
chr5	41600819	41600820	chr5:41600820:C:T	rs2656970	C	T	T	Sox2_MA0143.3	26	0	+	0	0	.
chr5	41625789	41625790	chr5:41625790:C:T	rs3851448	C	T	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr5	42076749	42076750	chr5:42076750:T:A	rs276277	T	A	T	Sox2_MA0143.3	21	0	-	0	0	.
chr5	42109373	42109374	chr5:42109374:A:G	rs275017	A	G	a	Sox2_MA0143.3	-14	0	+	0	0	.
chr5	42321664	42321665	chr5:42321665:A:G	rs4866836	A	G	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr5	42360228	42360229	chr5:42360229:C:A	chr5:42360229:C:A	C	A	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr5	42636613	42636614	chr5:42636614:A:G	chr5:42636614:A:G	A	G	A	Sox2_MA0143.3	-5	0	+	0	0	.
chr5	42756805	42756806	chr5:42756806:G:A	rs375098732	G	A	G	Sox2_MA0143.3	27	0	+	0	0	.
chr5	42759651	42759652	chr5:42759652:T:A	rs2910866	T	A	A	Sox2_MA0143.3	27	0	+	0	0	.
chr5	42855866	42855867	chr5:42855867:A:G	rs61371942	A	G	A	Sox2_MA0143.3	-3	0	-	0	0	.
chr5	42858840	42858841	chr5:42858841:C:G	rs905663592	C	G	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr5	42943955	42943956	chr5:42943956:T:C	rs966213704	T	C	T	Sox2_MA0143.3	25	0	-	0	0	.
chr5	42990872	42990873	chr5:42990873:G:A	rs11550288	G	A	G	Sox2_MA0143.3	16	0	+	0	0	.
chr5	43007847	43007848	chr5:43007848:G:A	rs6451660	G	A	a	Sox2_MA0143.3	12	0	+	0	0	.
chr5	43043285	43043286	chr5:43043286:C:T	rs11949983	C	T	C	Sox2_MA0143.3	17	0	-	0	0	.
chr5	43045422	43045423	chr5:43045423:C:T	rs3207358	C	T	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr5	43078999	43079000	chr5:43079000:C:T	rs2603636	C	T	T	Sox2_MA0143.3	-3	0	-	0	0	.
chr5	43116280	43116281	chr5:43116281:G:A	rs506232	G	A	G	Sox2_MA0143.3	-3	0	+	0	0	.
chr5	43186325	43186326	chr5:43186326:G:C	rs79280393	G	C	G	Sox2_MA0143.3	1	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr5	43256086	43256087	chr5:43256087:G:A	rs35211243	G	A	G	Sox2_MA0143.3	12	0	-	0	0	.
chr5	43282049	43282050	chr5:43282050:A:G	rs73096642	A	G	a	Sox2_MA0143.3	2	1	+	9.613475778572903	3.494828071296623	CCATTGTT
chr5	43308587	43308588	chr5:43308588:T:C	rs10941622	T	C	T	Sox2_MA0143.3	-18	0	-	0	0	.
chr5	43316037	43316038	chr5:43316038:A:C	rs1015795195	A	C	A	Sox2_MA0143.3	-20	0	+	0	0	.
chr5	43347803	43347804	chr5:43347804:G:A	rs191604210	G	A	G	Sox2_MA0143.3	21	0	-	0	0	.
chr5	43556056	43556057	chr5:43556057:G:C	rs144276651	G	C	G	Sox2_MA0143.3	17	0	+	0	0	.
chr5	43556384	43556385	chr5:43556385:C:A	rs55641556	C	A	C	Sox2_MA0143.3	9	0	-	0	0	.
chr5	43586272	43586273	chr5:43586273:G:A	rs6898866	G	A	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr5	43770069	43770070	chr5:43770070:T:G	rs74765826	T	G	T	Sox2_MA0143.3	14	0	+	0	0	.
chr5	43908875	43908876	chr5:43908876:G:A	chr5:43908876:G:A	G	A	C	Sox2_MA0143.3	20	0	-	0	0	.
chr5	43960051	43960052	chr5:43960052:A:G	rs115428714	A	G	A	Sox2_MA0143.3	17	0	+	0	0	.
chr5	43973649	43973650	chr5:43973650:C:T	rs6888180	C	T	C	Sox2_MA0143.3	1	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr5	44110307	44110308	chr5:44110308:G:A	rs12515359	G	A	G	Sox2_MA0143.3	23	0	+	0	0	.
chr5	44314788	44314789	chr5:44314789:G:A	rs139234659	G	A	G	Sox2_MA0143.3	8	0	-	0	0	.
chr5	44504700	44504701	chr5:44504701:T:C	rs1905188	T	C	T	Sox2_MA0143.3	2	1	-	9.613475778572903	3.494828071296623	CCATTGTT
chr5	44886329	44886330	chr5:44886330:G:A	rs10045264	G	A	G	Sox2_MA0143.3	17	0	+	0	0	.
chr5	44922601	44922602	chr5:44922602:C:G	rs7708506	C	G	G	Sox2_MA0143.3	15	0	-	0	0	.
chr5	45542949	45542950	chr5:45542950:G:A	rs74957671	G	A	G	Sox2_MA0143.3	-11	0	+	0	0	.
chr5	45979888	45979889	chr5:45979889:T:C	rs62372987	T	C	.	Sox2_MA0143.3	-3	0	-	0	0	.
chr5	46111915	46111916	chr5:46111916:C:T	rs35283978	C	T	c	Sox2_MA0143.3	-7	0	-	0	0	.
chr5	46381446	46381447	chr5:46381447:A:G	rs62389499	A	G	.	Sox2_MA0143.3	-19	0	+	0	0	.
chr5	46513107	46513108	chr5:46513108:A:G	rs1168821003	A	G	.	Sox2_MA0143.3	-15	0	+	0	0	.
chr5	46658999	46659000	chr5:46659000:G:A	rs1247799791	G	A	.	Sox2_MA0143.3	-13	0	+	0	0	.
chr5	46659000	46659001	chr5:46659001:C:A	rs1383022239	C	A	.	Sox2_MA0143.3	-12	0	+	0	0	.
chr5	49599476	49599477	chr5:49599477:G:A	rs1489716080	G	A	.	Sox2_MA0143.3	-1	0	+	0	0	.
chr5	49599491	49599492	chr5:49599492:T:G	rs1195810380	T	G	.	Sox2_MA0143.3	14	0	+	0	0	.
chr5	49599501	49599502	chr5:49599502:G:A	chr5:49599502:G:A	G	A	.	Sox2_MA0143.3	24	0	+	0	0	.
chr5	49599504	49599505	chr5:49599505:A:G	rs1249504905	A	G	.	Sox2_MA0143.3	27	0	+	0	0	.
chr5	50147534	50147535	chr5:50147535:C:T	rs9688258	C	T	.	Sox2_MA0143.3	0	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr5	50449497	50449498	chr5:50449498:G:A	rs34433187	G	A	g	Sox2_MA0143.3	-3	0	+	0	0	.
chr5	50450488	50450489	chr5:50450489:A:G	rs7720960	A	G	N	Sox2_MA0143.3	15	0	+	0	0	.
chr5	50593857	50593858	chr5:50593858:G:T	rs181009401	G	T	g	Sox2_MA0143.3	12	0	-	0	0	.
chr5	50607584	50607585	chr5:50607585:G:A	rs114517020	G	A	c	Sox2_MA0143.3	18	0	+	0	0	.
chr5	50666831	50666832	chr5:50666832:G:A	rs4324624	G	A	g	Sox2_MA0143.3	15	0	+	0	0	.
chr5	50696595	50696596	chr5:50696596:A:G	rs11750771	A	G	A	Sox2_MA0143.3	-6	0	+	0	0	.
chr5	50843451	50843452	chr5:50843452:A:G	rs285529	A	G	A	Sox2_MA0143.3	17	0	+	0	0	.
chr5	50959031	50959032	chr5:50959032:T:G	rs10472047	T	G	T	Sox2_MA0143.3	-15	0	-	0	0	.
chr5	50965120	50965121	chr5:50965121:A:G	rs111320481	A	G	A	Sox2_MA0143.3	4	1	-	9.206767037375712	2.2980122580604916	CCTTTGTC
chr5	50968615	50968616	chr5:50968616:G:A	rs115545896	G	A	G	Sox2_MA0143.3	-3	0	-	0	0	.
chr5	51047753	51047754	chr5:51047754:A:C	rs78907795	A	C	A	Sox2_MA0143.3	12	0	+	0	0	.
chr5	51090785	51090786	chr5:51090786:G:A	rs62365376	G	A	G	Sox2_MA0143.3	1	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr5	51653192	51653193	chr5:51653193:C:T	rs77660181	C	T	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr5	52252275	52252276	chr5:52252276:G:A	rs4262059	G	A	A	Sox2_MA0143.3	-11	0	-	0	0	.
chr5	52277293	52277294	chr5:52277294:G:T	rs80072086	G	T	G	Sox2_MA0143.3	-3	0	+	0	0	.
chr5	52305134	52305135	chr5:52305135:C:T	rs111844326	C	T	C	Sox2_MA0143.3	22	0	-	0	0	.
chr5	52725275	52725276	chr5:52725276:A:G	rs73753709	A	G	A	Sox2_MA0143.3	-8	0	+	0	0	.
chr5	52725924	52725925	chr5:52725925:G:T	rs182168400	G	T	G	Sox2_MA0143.3	13	0	-	0	0	.
chr5	52725944	52725945	chr5:52725945:T:G	rs830885	T	G	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr5	52771906	52771907	chr5:52771907:A:G	rs2648737	A	G	G	Sox2_MA0143.3	17	0	+	0	0	.
chr5	52774249	52774250	chr5:52774250:C:A	rs2173525	C	A	A	Sox2_MA0143.3	-17	0	+	0	0	.
chr5	52786596	52786597	chr5:52786597:T:C	rs149702856	T	C	T	Sox2_MA0143.3	16	0	-	0	0	.
chr5	52791561	52791562	chr5:52791562:C:T	rs11750032	C	T	C	Sox2_MA0143.3	13	0	-	0	0	.
chr5	52801348	52801349	chr5:52801349:A:G	rs2059202	A	G	G	Sox2_MA0143.3	8	0	+	0	0	.
chr5	52859807	52859808	chr5:52859808:A:G	rs73102285	A	G	G	Sox2_MA0143.3	9	0	+	0	0	.
chr5	52904583	52904584	chr5:52904584:A:G	rs6875863	A	G	G	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr5	52919347	52919348	chr5:52919348:C:T	rs2279585	C	T	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr5	53019417	53019418	chr5:53019418:G:A	rs987556114	G	A	G	Sox2_MA0143.3	-3	0	+	0	0	.
chr5	53053551	53053552	chr5:53053552:G:C	chr5:53053552:G:C	G	C	G	Sox2_MA0143.3	25	0	-	0	0	.
chr5	53245834	53245835	chr5:53245835:G:A	rs6450122	G	A	G	Sox2_MA0143.3	11	0	+	0	0	.
chr5	53263275	53263276	chr5:53263276:G:T	rs547149136	G	T	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr5	53340026	53340027	chr5:53340027:A:G	rs77659850	A	G	A	Sox2_MA0143.3	6	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr5	53343869	53343870	chr5:53343870:G:A	rs10491443	G	A	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr5	53361263	53361264	chr5:53361264:G:A	rs35532127	G	A	A	Sox2_MA0143.3	-1	0	+	0	0	.
chr5	53361271	53361272	chr5:53361272:G:A	rs6875756	G	A	A	Sox2_MA0143.3	7	1	+	8.676919043985553	3.3675628303222993	CCATTGTG
chr5	53432798	53432799	chr5:53432799:C:T	rs1862606	C	T	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr5	53716644	53716645	chr5:53716645:A:G	rs256103	A	G	G	Sox2_MA0143.3	6	1	-	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr5	53783086	53783087	chr5:53783087:C:A	rs9688205	C	A	c	Sox2_MA0143.3	22	0	-	0	0	.
chr5	53838729	53838730	chr5:53838730:T:C	rs10940344	T	C	T	Sox2_MA0143.3	14	0	-	0	0	.
chr5	53934929	53934930	chr5:53934930:A:G	rs1388112	A	G	A	Sox2_MA0143.3	-14	0	-	0	0	.
chr5	53937725	53937726	chr5:53937726:T:C	rs13170364	T	C	T	Sox2_MA0143.3	13	0	-	0	0	.
chr5	53996186	53996187	chr5:53996187:G:A	rs7732139	G	A	G	Sox2_MA0143.3	10	0	-	0	0	.
chr5	54021652	54021653	chr5:54021653:C:G	rs76345162	C	G	G	Sox2_MA0143.3	1	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr5	54180717	54180718	chr5:54180718:C:A	rs66541213	C	A	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr5	54360774	54360775	chr5:54360775:T:C	rs2407513	T	C	T	Sox2_MA0143.3	4	1	+	9.800647049772198	2.8918922704569785	CCTTTGTT
chr5	54361394	54361395	chr5:54361395:C:T	rs77638674	C	T	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr5	54391057	54391058	chr5:54391058:T:C	rs3111643	T	C	T	Sox2_MA0143.3	2	1	-	9.019595766176417	2.900948058900136	CCATTGTC
chr5	54478042	54478043	chr5:54478043:G:C	rs74927387	G	C	G	Sox2_MA0143.3	17	0	-	0	0	.
chr5	54483572	54483573	chr5:54483573:A:G	rs6450208	A	G	G	Sox2_MA0143.3	2	1	+	8.676919043985553	2.5582713367092715	CCATTGTG
chr5	54483576	54483577	chr5:54483577:T:G	rs7710151	T	G	G	Sox2_MA0143.3	6	1	+	8.676919043985553	1.7681642646703326	CCATTGTG
chr5	54531865	54531866	chr5:54531866:G:A	rs2565000	G	A	A	Sox2_MA0143.3	27	0	-	0	0	.
chr5	54570627	54570628	chr5:54570628:C:T	chr5:54570628:C:T	C	T	C	Sox2_MA0143.3	15	0	+	0	0	.
chr5	54600764	54600765	chr5:54600765:G:A	rs3857284	G	A	G	Sox2_MA0143.3	14	0	-	0	0	.
chr5	54600767	54600768	chr5:54600768:G:A	rs3857285	G	A	G	Sox2_MA0143.3	11	0	-	0	0	.
chr5	54601387	54601388	chr5:54601388:G:A	rs7719215	G	A	G	Sox2_MA0143.3	-3	0	+	0	0	.
chr5	54611439	54611440	chr5:54611440:C:T	rs78158874	C	T	C	Sox2_MA0143.3	23	0	+	0	0	.
chr5	54641584	54641585	chr5:54641585:G:A	rs1241900968	G	A	G	Sox2_MA0143.3	27	0	-	0	0	.
chr5	54704192	54704193	chr5:54704193:G:T	rs10063480	G	T	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr5	54742847	54742848	chr5:54742848:C:T	rs10940422	C	T	C	Sox2_MA0143.3	19	0	+	0	0	.
chr5	54773865	54773866	chr5:54773866:G:A	rs144710154	G	A	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr5	54838283	54838284	chr5:54838284:C:T	rs148910366	C	T	C	Sox2_MA0143.3	17	0	-	0	0	.
chr5	54845065	54845066	chr5:54845066:G:A	rs7448996	G	A	A	Sox2_MA0143.3	-7	0	+	0	0	.
chr5	54931530	54931531	chr5:54931531:C:T	rs952380	C	T	T	Sox2_MA0143.3	-16	0	+	0	0	.
chr5	54959808	54959809	chr5:54959809:T:C	rs1412494065	T	C	T	Sox2_MA0143.3	20	0	-	0	0	.
chr5	54959816	54959817	chr5:54959817:T:C	rs4352564	T	C	T	Sox2_MA0143.3	12	0	-	0	0	.
chr5	55051742	55051743	chr5:55051743:T:C	rs1858084	T	C	C	Sox2_MA0143.3	2	1	-	8.676919043985553	2.5582713367092715	CCATTGTG
chr5	55495613	55495614	chr5:55495614:A:G	rs7723462	A	G	A	Sox2_MA0143.3	4	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr5	55555468	55555469	chr5:55555469:G:A	rs2048227	G	A	A	Sox2_MA0143.3	23	0	+	0	0	.
chr5	55564987	55564988	chr5:55564988:T:C	rs34460971	T	C	T	Sox2_MA0143.3	17	0	-	0	0	.
chr5	55584400	55584401	chr5:55584401:G:T	rs11738691	G	T	G	Sox2_MA0143.3	23	0	+	0	0	.
chr5	55714604	55714605	chr5:55714605:C:T	rs114180382	C	T	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr5	55738386	55738387	chr5:55738387:T:C	chr5:55738387:T:C	T	C	T	Sox2_MA0143.3	-1	0	+	0	0	.
chr5	56159772	56159773	chr5:56159773:C:T	rs115250350	C	T	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr5	56273868	56273869	chr5:56273869:G:A	rs3843465	G	A	G	Sox2_MA0143.3	10	0	-	0	0	.
chr5	56277854	56277855	chr5:56277855:C:G	rs4267832	C	G	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr5	56285137	56285138	chr5:56285138:A:G	rs149136	A	G	A	Sox2_MA0143.3	20	0	+	0	0	.
chr5	56321543	56321544	chr5:56321544:C:G	rs73129691	C	G	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr5	56350984	56350985	chr5:56350985:G:A	rs289782	G	A	A	Sox2_MA0143.3	-2	0	-	0	0	.
chr5	56356660	56356661	chr5:56356661:T:G	rs290757	T	G	G	Sox2_MA0143.3	15	0	-	0	0	.
chr5	56357680	56357681	chr5:56357681:G:A	rs72752255	G	A	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr5	56429519	56429520	chr5:56429520:T:C	rs6450390	T	C	T	Sox2_MA0143.3	10	0	-	0	0	.
chr5	56430544	56430545	chr5:56430545:G:A	rs3852137	G	A	A	Sox2_MA0143.3	24	0	-	0	0	.
chr5	56480756	56480757	chr5:56480757:C:T	rs72754128	C	T	C	Sox2_MA0143.3	10	0	-	0	0	.
chr5	56480926	56480927	chr5:56480927:C:G	rs139316595	C	G	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr5	56511542	56511543	chr5:56511543:C:T	rs464605	C	T	C	Sox2_MA0143.3	0	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr5	56512321	56512322	chr5:56512322:A:G	rs245143	A	G	A	Sox2_MA0143.3	-13	0	-	0	0	.
chr5	56552788	56552789	chr5:56552789:T:C	rs55780630	T	C	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr5	56608302	56608303	chr5:56608303:T:C	rs981225989	T	C	T	Sox2_MA0143.3	27	0	-	0	0	.
chr5	56608317	56608318	chr5:56608318:T:G	rs74690991	T	G	T	Sox2_MA0143.3	12	0	-	0	0	.
chr5	56639110	56639111	chr5:56639111:C:T	rs1296284	C	T	T	Sox2_MA0143.3	18	0	+	0	0	.
chr5	56641037	56641038	chr5:56641038:C:T	chr5:56641038:C:T	C	T	C	Sox2_MA0143.3	5	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr5	56665491	56665492	chr5:56665492:C:T	rs111984461	C	T	C	Sox2_MA0143.3	1	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr5	56669693	56669694	chr5:56669694:T:C	rs768331896	T	C	T	Sox2_MA0143.3	22	0	-	0	0	.
chr5	56669780	56669781	chr5:56669781:G:A	rs16885969	G	A	G	Sox2_MA0143.3	16	0	-	0	0	.
chr5	56669863	56669864	chr5:56669864:C:T	rs550172477	C	T	C	Sox2_MA0143.3	14	0	-	0	0	.
chr5	56697119	56697120	chr5:56697120:G:T	rs75615418	G	T	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr5	56698303	56698304	chr5:56698304:C:T	rs6450397	C	T	T	Sox2_MA0143.3	7	1	-	8.676919043985553	3.3675628303222993	CCATTGTG
chr5	56854709	56854710	chr5:56854710:A:G	rs860581	A	G	G	Sox2_MA0143.3	18	0	+	0	0	.
chr5	56978249	56978250	chr5:56978250:T:G	rs1002473	T	G	G	Sox2_MA0143.3	-9	0	+	0	0	.
chr5	56978260	56978261	chr5:56978261:T:C	rs1002474	T	C	C	Sox2_MA0143.3	2	1	+	9.800647049772198	3.494828071296623	CCTTTGTT
chr5	57095495	57095496	chr5:57095496:A:T	rs147039648	A	T	A	Sox2_MA0143.3	26	0	-	0	0	.
chr5	57147690	57147691	chr5:57147691:G:A	rs1096617	G	A	A	Sox2_MA0143.3	23	0	-	0	0	.
chr5	57215892	57215893	chr5:57215893:C:T	rs2080846	C	T	T	Sox2_MA0143.3	-14	0	+	0	0	.
chr5	57332438	57332439	chr5:57332439:C:G	rs9292133	C	G	G	Sox2_MA0143.3	27	0	+	0	0	.
chr5	57403927	57403928	chr5:57403928:C:T	rs13174319	C	T	C	Sox2_MA0143.3	19	0	-	0	0	.
chr5	57429799	57429800	chr5:57429800:G:A	rs6898036	G	A	G	Sox2_MA0143.3	-9	0	+	0	0	.
chr5	57429821	57429822	chr5:57429822:G:C	rs6898050	G	C	G	Sox2_MA0143.3	13	0	+	0	0	.
chr5	57582327	57582328	chr5:57582328:C:G	rs10472018	C	G	C	Sox2_MA0143.3	20	0	+	0	0	.
chr5	57607253	57607254	chr5:57607254:C:T	rs17315098	C	T	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr5	57627931	57627932	chr5:57627932:G:A	rs10513124	G	A	G	Sox2_MA0143.3	-11	0	+	0	0	.
chr5	57736690	57736691	chr5:57736691:G:A	rs7731080	G	A	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr5	57797483	57797484	chr5:57797484:A:G	rs854040	A	G	A	Sox2_MA0143.3	21	0	+	0	0	.
chr5	57854120	57854121	chr5:57854121:C:T	rs16887469	C	T	C	Sox2_MA0143.3	1	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr5	58011533	58011534	chr5:58011534:G:A	rs10513134	G	A	G	Sox2_MA0143.3	23	0	-	0	0	.
chr5	58024467	58024468	chr5:58024468:C:G	rs1869651	C	G	C	Sox2_MA0143.3	1	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr5	58056516	58056517	chr5:58056517:T:A	rs4406106	T	A	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr5	58056517	58056518	chr5:58056518:A:T	rs4345267	A	T	A	Sox2_MA0143.3	-18	0	+	0	0	.
chr5	58063930	58063931	chr5:58063931:C:G	rs78355994	C	G	C	Sox2_MA0143.3	22	0	+	0	0	.
chr5	58126333	58126334	chr5:58126334:C:T	rs75662268	C	T	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr5	58136203	58136204	chr5:58136204:G:A	rs55786771	G	A	G	Sox2_MA0143.3	25	0	-	0	0	.
chr5	58188479	58188480	chr5:58188480:C:T	rs2112905	C	T	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr5	58229482	58229483	chr5:58229483:G:A	rs80272913	G	A	G	Sox2_MA0143.3	27	0	-	0	0	.
chr5	58437930	58437931	chr5:58437931:G:A	rs158155	G	A	G	Sox2_MA0143.3	14	0	-	0	0	.
chr5	58467176	58467177	chr5:58467177:C:A	rs567860147	C	A	C	Sox2_MA0143.3	5	1	-	8.676919043985553	1.7681642646703324	CCATTGTG
chr5	58467188	58467189	chr5:58467189:C:T	rs79634058	C	T	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr5	58503753	58503754	chr5:58503754:C:T	rs11948189	C	T	C	Sox2_MA0143.3	24	0	+	0	0	.
chr5	58546221	58546222	chr5:58546222:C:G	rs6870990	C	G	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr5	58624335	58624336	chr5:58624336:A:G	rs449867	A	G	A	Sox2_MA0143.3	-9	0	-	0	0	.
chr5	58745558	58745559	chr5:58745559:G:A	rs183235243	G	A	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr5	58754244	58754245	chr5:58754245:T:C	rs10471460	T	C	T	Sox2_MA0143.3	16	0	-	0	0	.
chr5	58800567	58800568	chr5:58800568:C:T	rs564538694	C	T	C	Sox2_MA0143.3	27	0	+	0	0	.
chr5	58890876	58890877	chr5:58890877:G:T	chr5:58890877:G:T	G	T	G	Sox2_MA0143.3	-14	0	+	0	0	.
chr5	58890877	58890878	chr5:58890878:C:T	chr5:58890878:C:T	C	T	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr5	58891870	58891871	chr5:58891871:C:T	rs750046863	C	T	C	Sox2_MA0143.3	12	0	-	0	0	.
chr5	58891873	58891874	chr5:58891874:G:T	rs555722473	G	T	G	Sox2_MA0143.3	9	0	-	0	0	.
chr5	58916492	58916493	chr5:58916493:G:A	rs159740	G	A	A	Sox2_MA0143.3	-4	0	-	0	0	.
chr5	59010591	59010592	chr5:59010592:G:A	rs1909294	G	A	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr5	59133814	59133815	chr5:59133815:C:T	rs997421	C	T	c	Sox2_MA0143.3	-3	0	-	0	0	.
chr5	59134368	59134369	chr5:59134369:C:T	rs17778950	C	T	c	Sox2_MA0143.3	-2	0	-	0	0	.
chr5	59299347	59299348	chr5:59299348:A:G	rs255635	A	G	G	Sox2_MA0143.3	6	1	-	9.613475778572903	2.7047209992576837	CCATTGTT
chr5	59317552	59317553	chr5:59317553:C:T	rs149238290	C	T	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr5	59395159	59395160	chr5:59395160:G:C	rs183305295	G	C	g	Sox2_MA0143.3	-5	0	+	0	0	.
chr5	59662004	59662005	chr5:59662005:C:T	rs17440909	C	T	C	Sox2_MA0143.3	16	0	+	0	0	.
chr5	59662374	59662375	chr5:59662375:A:C	rs191909489	A	C	G	Sox2_MA0143.3	16	0	-	0	0	.
chr5	59733026	59733027	chr5:59733027:T:C	rs11954036	T	C	T	Sox2_MA0143.3	9	0	-	0	0	.
chr5	59800207	59800208	chr5:59800208:C:T	chr5:59800208:C:T	C	T	C	Sox2_MA0143.3	26	0	-	0	0	.
chr5	59800252	59800253	chr5:59800253:A:G	rs116189255	A	G	A	Sox2_MA0143.3	-19	0	-	0	0	.
chr5	59814429	59814430	chr5:59814430:G:A	rs576192247	G	A	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr5	59831435	59831436	chr5:59831436:T:G	rs73092830	T	G	T	Sox2_MA0143.3	14	0	-	0	0	.
chr5	60067688	60067689	chr5:60067689:G:A	rs76669289	G	A	G	Sox2_MA0143.3	-2	0	+	0	0	.
chr5	60149309	60149310	chr5:60149310:C:T	rs983280	C	T	T	Sox2_MA0143.3	-20	0	-	0	0	.
chr5	60334621	60334622	chr5:60334622:G:T	rs78358955	G	T	G	Sox2_MA0143.3	9	0	+	0	0	.
chr5	60334623	60334624	chr5:60334624:A:T	rs75847598	A	T	A	Sox2_MA0143.3	11	0	+	0	0	.
chr5	60701293	60701294	chr5:60701294:G:A	rs2061251	G	A	G	Sox2_MA0143.3	26	0	+	0	0	.
chr5	60736323	60736324	chr5:60736324:T:G	rs6449491	T	G	T	Sox2_MA0143.3	15	0	+	0	0	.
chr5	60802439	60802440	chr5:60802440:A:G	rs4700393	A	G	G	Sox2_MA0143.3	9	0	-	0	0	.
chr5	60889597	60889598	chr5:60889598:G:A	rs35948426	G	A	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr5	60906419	60906420	chr5:60906420:A:T	rs62372134	A	T	A	Sox2_MA0143.3	-18	0	-	0	0	.
chr5	60932791	60932792	chr5:60932792:G:A	rs35957723	G	A	G	Sox2_MA0143.3	0	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr5	61000728	61000729	chr5:61000729:C:T	rs290505	C	T	C	Sox2_MA0143.3	15	0	+	0	0	.
chr5	61048916	61048917	chr5:61048917:C:T	rs40084	C	T	T	Sox2_MA0143.3	-3	0	-	0	0	.
chr5	61263915	61263916	chr5:61263916:A:C	rs4640746	A	C	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr5	61281299	61281300	chr5:61281300:T:C	rs114699899	T	C	T	Sox2_MA0143.3	3	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr5	61304820	61304821	chr5:61304821:C:T	rs1023727183	C	T	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr5	61333282	61333283	chr5:61333283:G:A	rs1005333257	G	A	-	Sox2_MA0143.3	10	0	-	0	0	.
chr5	61333295	61333296	chr5:61333296:C:T	rs905336761	C	T	-	Sox2_MA0143.3	-3	0	-	0	0	.
chr5	61333305	61333306	chr5:61333306:G:T	rs182728817	G	T	-	Sox2_MA0143.3	-13	0	-	0	0	.
chr5	61465757	61465758	chr5:61465758:T:G	rs6449535	T	G	T	Sox2_MA0143.3	4	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr5	61675223	61675224	chr5:61675224:A:G	rs12523615	A	G	A	Sox2_MA0143.3	-11	0	-	0	0	.
chr5	61675239	61675240	chr5:61675240:C:T	rs564054181	C	T	T	Sox2_MA0143.3	24	0	+	0	0	.
chr5	61949917	61949918	chr5:61949918:C:A	rs73760523	C	A	C	Sox2_MA0143.3	13	0	-	0	0	.
chr5	62142576	62142577	chr5:62142577:G:T	rs3906400	G	T	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr5	62436255	62436256	chr5:62436256:A:T	rs153856	A	T	A	Sox2_MA0143.3	21	0	-	0	0	.
chr5	62714264	62714265	chr5:62714265:C:T	rs10434535	C	T	C	Sox2_MA0143.3	15	0	+	0	0	.
chr5	62795968	62795969	chr5:62795969:G:A	rs16891097	G	A	G	Sox2_MA0143.3	5	1	+	9.019595766176417	2.110840986861197	CCATTGTC
chr5	62796164	62796165	chr5:62796165:C:T	rs2132020	C	T	T	Sox2_MA0143.3	-20	0	+	0	0	.
chr5	62796169	62796170	chr5:62796170:T:C	rs12657819	T	C	T	Sox2_MA0143.3	-15	0	+	0	0	.
chr5	62796202	62796203	chr5:62796203:C:T	rs142282715	C	T	C	Sox2_MA0143.3	18	0	+	0	0	.
chr5	63120978	63120979	chr5:63120979:A:G	rs10066621	A	G	G	Sox2_MA0143.3	21	0	-	0	0	.
chr5	63121006	63121007	chr5:63121007:A:G	rs10066628	A	G	A	Sox2_MA0143.3	-7	0	-	0	0	.
chr5	63145412	63145413	chr5:63145413:G:C	rs114775832	G	C	G	Sox2_MA0143.3	-3	0	+	0	0	.
chr5	63158195	63158196	chr5:63158196:T:C	rs692363	T	C	T	Sox2_MA0143.3	-19	0	-	0	0	.
chr5	63228368	63228369	chr5:63228369:G:A	rs28857221	G	A	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr5	63646176	63646177	chr5:63646177:C:T	rs78635400	C	T	C	Sox2_MA0143.3	-5	0	-	0	0	.
chr5	63653421	63653422	chr5:63653422:C:T	rs16892110	C	T	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr5	64760407	64760408	chr5:64760408:T:C	rs6449756	T	C	T	Sox2_MA0143.3	-5	0	-	0	0	.
chr5	64769110	64769111	chr5:64769111:C:G	rs761460877	C	G	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr5	64769115	64769116	chr5:64769116:G:A	rs1363953	G	A	A	Sox2_MA0143.3	-14	0	+	0	0	.
chr5	64914479	64914480	chr5:64914480:G:T	rs60472664	G	T	T	Sox2_MA0143.3	16	0	-	0	0	.
chr5	64979709	64979710	chr5:64979710:T:G	rs1309577	T	G	G	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr5	65061066	65061067	chr5:65061067:A:G	rs395850	A	G	G	Sox2_MA0143.3	3	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr5	65104551	65104552	chr5:65104552:G:C	rs6872477	G	C	G	Sox2_MA0143.3	-3	0	-	0	0	.
chr5	65172599	65172600	chr5:65172600:T:C	rs139962973	T	C	T	Sox2_MA0143.3	-11	0	-	0	0	.
chr5	65189982	65189983	chr5:65189983:G:T	rs75265822	G	T	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr5	65530440	65530441	chr5:65530441:C:T	rs12516164	C	T	T	Sox2_MA0143.3	-15	0	-	0	0	.
chr5	65535689	65535690	chr5:65535690:C:T	rs13162392	C	T	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr5	65752659	65752660	chr5:65752660:T:C	rs2591929	T	C	T	Sox2_MA0143.3	27	0	-	0	0	.
chr5	65758983	65758984	chr5:65758984:A:G	rs40107	A	G	G	Sox2_MA0143.3	6	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr5	65802717	65802718	chr5:65802718:C:T	rs2561201	C	T	C	Sox2_MA0143.3	9	0	-	0	0	.
chr5	65810606	65810607	chr5:65810607:C:T	rs116748234	C	T	C	Sox2_MA0143.3	20	0	+	0	0	.
chr5	65835476	65835477	chr5:65835477:G:A	rs2561217	G	A	G	Sox2_MA0143.3	-16	0	-	0	0	.
chr5	65927069	65927070	chr5:65927070:T:C	rs37234	T	C	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr5	65927103	65927104	chr5:65927104:G:A	rs148148263	G	A	G	Sox2_MA0143.3	16	0	+	0	0	.
chr5	65927105	65927106	chr5:65927106:G:A	rs1018108400	G	A	G	Sox2_MA0143.3	18	0	+	0	0	.
chr5	65932422	65932423	chr5:65932423:G:C	rs251614	G	C	G	Sox2_MA0143.3	16	0	+	0	0	.
chr5	66146251	66146252	chr5:66146252:A:G	rs139800256	A	G	A	Sox2_MA0143.3	-5	0	+	0	0	.
chr5	66241248	66241249	chr5:66241249:A:T	rs29457	A	T	T	Sox2_MA0143.3	-4	0	+	0	0	.
chr5	66257382	66257383	chr5:66257383:G:T	rs12654745	G	T	G	Sox2_MA0143.3	26	0	-	0	0	.
chr5	66289194	66289195	chr5:66289195:C:G	rs74387269	C	G	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr5	66443727	66443728	chr5:66443728:T:A	rs10514994	T	A	T	Sox2_MA0143.3	-10	0	+	0	0	.
chr5	66633725	66633726	chr5:66633726:C:A	rs16895351	C	A	C	Sox2_MA0143.3	1	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr5	66680379	66680380	chr5:66680380:T:G	rs79879717	T	G	T	Sox2_MA0143.3	-9	0	+	0	0	.
chr5	66707284	66707285	chr5:66707285:G:C	rs16895518	G	C	G	Sox2_MA0143.3	5	1	+	9.613475778572903	2.7047209992576837	CCATTGTT
chr5	66823782	66823783	chr5:66823783:T:C	rs12153382	T	C	T	Sox2_MA0143.3	-14	0	+	0	0	.
chr5	66863902	66863903	chr5:66863903:C:T	rs67355492	C	T	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr5	67011101	67011102	chr5:67011102:G:A	rs537382	G	A	A	Sox2_MA0143.3	-17	0	+	0	0	.
chr5	67013870	67013871	chr5:67013871:C:T	rs62372483	C	T	C	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr5	67062630	67062631	chr5:67062631:T:C	rs143768167	T	C	T	Sox2_MA0143.3	25	0	-	0	0	.
chr5	67139891	67139892	chr5:67139892:C:T	rs115993706	C	T	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr5	67157257	67157258	chr5:67157258:C:T	rs150274439	C	T	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr5	67166349	67166350	chr5:67166350:C:G	rs746669585	C	G	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr5	67246804	67246805	chr5:67246805:G:C	rs984091	G	C	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr5	67256264	67256265	chr5:67256265:T:C	rs16896501	T	C	T	Sox2_MA0143.3	25	0	+	0	0	.
chr5	67299700	67299701	chr5:67299701:A:G	rs140658609	A	G	A	Sox2_MA0143.3	16	0	+	0	0	.
chr5	67300327	67300328	chr5:67300328:A:G	rs11741519	A	G	G	Sox2_MA0143.3	11	0	+	0	0	.
chr5	67341851	67341852	chr5:67341852:C:T	rs3846483	C	T	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr5	67381768	67381769	chr5:67381769:A:T	rs1968378	A	T	A	Sox2_MA0143.3	-20	0	+	0	0	.
chr5	67416782	67416783	chr5:67416783:C:T	rs768660882	C	T	C	Sox2_MA0143.3	1	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr5	67492983	67492984	chr5:67492984:T:C	rs1489751	T	C	C	Sox2_MA0143.3	4	1	+	8.676919043985553	1.7681642646703322	CCATTGTG
chr5	67496348	67496349	chr5:67496349:C:T	rs747919	C	T	T	Sox2_MA0143.3	-19	0	-	0	0	.
chr5	67533187	67533188	chr5:67533188:A:G	rs17309574	A	G	A	Sox2_MA0143.3	-9	0	+	0	0	.
chr5	67640433	67640434	chr5:67640434:A:G	rs4078049	A	G	A	Sox2_MA0143.3	-9	0	+	0	0	.
chr5	67673355	67673356	chr5:67673356:G:C	rs79633862	G	C	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr5	67673829	67673830	chr5:67673830:G:A	rs6896755	G	A	A	Sox2_MA0143.3	10	0	-	0	0	.
chr5	67831260	67831261	chr5:67831261:G:A	rs7718041	G	A	G	Sox2_MA0143.3	-11	0	+	0	0	.
chr5	67855839	67855840	chr5:67855840:A:G	rs16897104	A	G	G	Sox2_MA0143.3	4	1	-	3.5547341015215945	-3.3540206777936254	CCTTTGTA
chr5	67910317	67910318	chr5:67910318:G:A	rs56006046	G	A	G	Sox2_MA0143.3	18	0	-	0	0	.
chr5	67961044	67961045	chr5:67961045:G:A	rs1550176	G	A	G	Sox2_MA0143.3	13	0	+	0	0	.
chr5	68002941	68002942	chr5:68002942:A:G	rs501941	A	G	A	Sox2_MA0143.3	-11	0	-	0	0	.
chr5	68033154	68033155	chr5:68033155:G:A	rs32948	G	A	A	Sox2_MA0143.3	15	0	+	0	0	.
chr5	68033154	68033155	chr5:68033155:G:T	chr5:68033155:G:T	G	T	A	Sox2_MA0143.3	15	0	+	0	0	.
chr5	68077626	68077627	chr5:68077627:C:A	rs74590372	C	A	C	Sox2_MA0143.3	12	0	-	0	0	.
chr5	68177544	68177545	chr5:68177545:G:A	rs73124561	G	A	G	Sox2_MA0143.3	5	1	+	9.206767037375712	2.298012258060492	CCTTTGTC
chr5	68219567	68219568	chr5:68219568:T:C	rs72770174	T	C	T	Sox2_MA0143.3	-12	0	+	0	0	.
chr5	68348211	68348212	chr5:68348212:G:A	rs79372405	G	A	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr5	68449383	68449384	chr5:68449384:G:A	rs853810	G	A	A	Sox2_MA0143.3	-6	0	+	0	0	.
chr5	68506918	68506919	chr5:68506919:T:C	rs10940166	T	C	T	Sox2_MA0143.3	-20	0	+	0	0	.
chr5	68506926	68506927	chr5:68506927:A:G	rs78714449	A	G	A	Sox2_MA0143.3	-12	0	+	0	0	.
chr5	68522753	68522754	chr5:68522754:A:G	rs7726943	A	G	A	Sox2_MA0143.3	13	0	+	0	0	.
chr5	68523756	68523757	chr5:68523757:A:G	rs6893396	A	G	A	Sox2_MA0143.3	11	0	+	0	0	.
chr5	68534055	68534056	chr5:68534056:T:C	rs75120493	T	C	T	Sox2_MA0143.3	-3	0	+	0	0	.
chr5	68549870	68549871	chr5:68549871:C:A	rs1344367	C	A	A	Sox2_MA0143.3	27	0	-	0	0	.
chr5	68554670	68554671	chr5:68554671:G:C	rs78189630	G	C	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr5	68655956	68655957	chr5:68655957:A:T	rs282418	A	T	A	Sox2_MA0143.3	7	1	-	9.800647049772198	3.5547341015215945	CCTTTGTT
chr5	68746465	68746466	chr5:68746466:T:C	rs78776144	T	C	T	Sox2_MA0143.3	27	0	-	0	0	.
chr5	69046407	69046408	chr5:69046408:T:C	rs4976178	T	C	T	Sox2_MA0143.3	20	0	-	0	0	.
chr5	69190160	69190161	chr5:69190161:T:C	rs369695590	T	C	T	Sox2_MA0143.3	18	0	+	0	0	.
chr5	69190163	69190164	chr5:69190164:A:G	rs7736312	A	G	A	Sox2_MA0143.3	21	0	+	0	0	.
chr5	69222519	69222520	chr5:69222520:G:T	rs2932773	G	T	t	Sox2_MA0143.3	-18	0	-	0	0	.
chr5	69409376	69409377	chr5:69409377:T:A	rs1168405	T	A	A	Sox2_MA0143.3	4	1	+	9.800647049772198	2.8918922704569785	CCTTTGTT
chr5	69494612	69494613	chr5:69494613:G:T	rs28652974	G	T	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr5	71098558	71098559	chr5:71098559:T:C	rs71238359	T	C	t	Sox2_MA0143.3	11	0	+	0	0	.
chr5	71537684	71537685	chr5:71537685:T:C	rs156755	T	C	T	Sox2_MA0143.3	22	0	+	0	0	.
chr5	71572290	71572291	chr5:71572291:C:T	rs467883	C	T	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr5	71786493	71786494	chr5:71786494:G:A	rs924314369	G	A	G	Sox2_MA0143.3	-9	0	+	0	0	.
chr5	71794827	71794828	chr5:71794828:G:A	rs62362175	G	A	g	Sox2_MA0143.3	-3	0	-	0	0	.
chr5	71830625	71830626	chr5:71830626:A:G	rs2721770	A	G	A	Sox2_MA0143.3	-11	0	-	0	0	.
chr5	71924397	71924398	chr5:71924398:G:A	rs1692383	G	A	A	Sox2_MA0143.3	11	0	+	0	0	.
chr5	72036880	72036881	chr5:72036881:G:A	rs1217763	G	A	G	Sox2_MA0143.3	19	0	-	0	0	.
chr5	72109022	72109023	chr5:72109023:G:A	rs186297769	G	A	G	Sox2_MA0143.3	0	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr5	72113039	72113040	chr5:72113040:A:G	rs2337390	A	G	G	Sox2_MA0143.3	27	0	-	0	0	.
chr5	72114528	72114529	chr5:72114529:G:C	rs2199161	G	C	C	Sox2_MA0143.3	10	0	-	0	0	.
chr5	72148768	72148769	chr5:72148769:A:G	rs9293787	A	G	G	Sox2_MA0143.3	26	0	-	0	0	.
chr5	72167107	72167108	chr5:72167108:A:G	rs187764238	A	G	A	Sox2_MA0143.3	21	0	-	0	0	.
chr5	72210606	72210607	chr5:72210607:A:G	rs10039706	A	G	g	Sox2_MA0143.3	-5	0	-	0	0	.
chr5	72211199	72211200	chr5:72211200:C:A	rs1194966988	C	A	C	Sox2_MA0143.3	19	0	-	0	0	.
chr5	72211225	72211226	chr5:72211226:A:G	rs567620263	A	G	A	Sox2_MA0143.3	-7	0	-	0	0	.
chr5	72222656	72222657	chr5:72222657:G:C	rs12189145	G	C	C	Sox2_MA0143.3	5	1	+	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr5	72508421	72508422	chr5:72508422:C:G	chr5:72508422:C:G	C	G	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr5	72509063	72509064	chr5:72509064:T:G	chr5:72509064:T:G	T	G	T	Sox2_MA0143.3	24	0	+	0	0	.
chr5	72518276	72518277	chr5:72518277:G:A	rs577629155	G	A	G	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr5	72537221	72537222	chr5:72537222:C:T	rs426975	C	T	T	Sox2_MA0143.3	-15	0	-	0	0	.
chr5	72537226	72537227	chr5:72537227:G:A	rs420009	G	A	A	Sox2_MA0143.3	-20	0	-	0	0	.
chr5	72543815	72543816	chr5:72543816:A:T	rs114449230	A	T	A	Sox2_MA0143.3	-17	0	+	0	0	.
chr5	72543853	72543854	chr5:72543854:A:C	rs389306	A	C	C	Sox2_MA0143.3	21	0	+	0	0	.
chr5	72556819	72556820	chr5:72556820:A:G	chr5:72556820:A:G	A	G	A	Sox2_MA0143.3	-8	0	-	0	0	.
chr5	72908873	72908874	chr5:72908874:C:T	rs759837808	C	T	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr5	73031211	73031212	chr5:73031212:T:C	rs79574259	T	C	T	Sox2_MA0143.3	-7	0	+	0	0	.
chr5	73143817	73143818	chr5:73143818:G:A	rs635444	G	A	G	Sox2_MA0143.3	20	0	-	0	0	.
chr5	73152327	73152328	chr5:73152328:T:C	rs475728	T	C	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr5	73202097	73202098	chr5:73202098:T:G	rs184665274	T	G	T	Sox2_MA0143.3	27	0	-	0	0	.
chr5	73202126	73202127	chr5:73202127:G:A	rs115234849	G	A	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr5	73287196	73287197	chr5:73287197:A:G	rs115397707	A	G	A	Sox2_MA0143.3	-13	0	-	0	0	.
chr5	73299834	73299835	chr5:73299835:C:G	rs60066271	C	G	G	Sox2_MA0143.3	9	0	-	0	0	.
chr5	73412842	73412843	chr5:73412843:T:C	rs144166994	T	C	T	Sox2_MA0143.3	-17	0	+	0	0	.
chr5	73418725	73418726	chr5:73418726:C:T	rs7707634	C	T	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr5	73439134	73439135	chr5:73439135:T:C	rs1375500	T	C	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr5	73497215	73497216	chr5:73497216:C:T	rs76830001	C	T	C	Sox2_MA0143.3	1	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr5	73497225	73497226	chr5:73497226:A:G	rs347245	A	G	A	Sox2_MA0143.3	11	0	+	0	0	.
chr5	73668400	73668401	chr5:73668401:A:G	rs10805882	A	G	A	Sox2_MA0143.3	20	0	+	0	0	.
chr5	73728880	73728881	chr5:73728881:C:T	rs16898934	C	T	T	Sox2_MA0143.3	-8	0	-	0	0	.
chr5	73732256	73732257	chr5:73732257:T:C	rs55899033	T	C	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr5	73741247	73741248	chr5:73741248:A:C	rs11746513	A	C	A	Sox2_MA0143.3	26	0	-	0	0	.
chr5	73773400	73773401	chr5:73773401:G:A	rs13164180	G	A	A	Sox2_MA0143.3	16	0	-	0	0	.
chr5	73780685	73780686	chr5:73780686:C:A	rs6453022	C	A	A	Sox2_MA0143.3	24	0	+	0	0	.
chr5	73825563	73825564	chr5:73825564:C:T	rs62357750	C	T	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr5	73827050	73827051	chr5:73827051:C:G	rs72772507	C	G	C	Sox2_MA0143.3	25	0	+	0	0	.
chr5	73864289	73864290	chr5:73864290:G:C	rs2931435	G	C	G	Sox2_MA0143.3	0	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr5	73968844	73968845	chr5:73968845:C:A	rs511623	C	A	C	Sox2_MA0143.3	10	0	-	0	0	.
chr5	73996341	73996342	chr5:73996342:G:A	rs11744221	G	A	G	Sox2_MA0143.3	16	0	+	0	0	.
chr5	74031477	74031478	chr5:74031478:A:G	rs285602	A	G	A	Sox2_MA0143.3	-5	0	+	0	0	.
chr5	74057442	74057443	chr5:74057443:T:C	rs6861281	T	C	T	Sox2_MA0143.3	20	0	-	0	0	.
chr5	74081386	74081387	chr5:74081387:C:T	rs7712663	C	T	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr5	74173336	74173337	chr5:74173337:G:A	rs184539372	G	A	G	Sox2_MA0143.3	27	0	-	0	0	.
chr5	74173489	74173490	chr5:74173490:T:C	rs555678308	T	C	T	Sox2_MA0143.3	16	0	-	0	0	.
chr5	74213670	74213671	chr5:74213671:G:A	rs12519078	G	A	G	Sox2_MA0143.3	24	0	+	0	0	.
chr5	74214285	74214286	chr5:74214286:A:C	chr5:74214286:A:C	A	C	A	Sox2_MA0143.3	26	0	+	0	0	.
chr5	74232315	74232316	chr5:74232316:C:T	rs56195259	C	T	C	Sox2_MA0143.3	11	0	+	0	0	.
chr5	74290936	74290937	chr5:74290937:T:A	rs113991218	T	A	A	Sox2_MA0143.3	17	0	-	0	0	.
chr5	74361934	74361935	chr5:74361935:T:C	rs409773	T	C	t	Sox2_MA0143.3	16	0	+	0	0	.
chr5	74370552	74370553	chr5:74370553:G:A	rs1393087	G	A	g	Sox2_MA0143.3	-4	0	+	0	0	.
chr5	74370844	74370845	chr5:74370845:C:A	rs17644023	C	A	c	Sox2_MA0143.3	15	0	+	0	0	.
chr5	74387818	74387819	chr5:74387819:A:G	rs10039450	A	G	g	Sox2_MA0143.3	2	1	+	9.613475778572903	3.494828071296623	CCATTGTT
chr5	74537905	74537906	chr5:74537906:G:C	rs1651350	G	C	G	Sox2_MA0143.3	9	0	+	0	0	.
chr5	74545194	74545195	chr5:74545195:T:A	rs398884	T	A	A	Sox2_MA0143.3	11	0	+	0	0	.
chr5	74545209	74545210	chr5:74545210:T:G	rs398199	T	G	G	Sox2_MA0143.3	26	0	+	0	0	.
chr5	74627674	74627675	chr5:74627675:G:A	rs73113456	G	A	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr5	74638305	74638306	chr5:74638306:A:G	rs3776474	A	G	G	Sox2_MA0143.3	26	0	-	0	0	.
chr5	74642230	74642231	chr5:74642231:A:G	rs945665839	A	G	A	Sox2_MA0143.3	14	0	+	0	0	.
chr5	74642626	74642627	chr5:74642627:G:A	rs1500136	G	A	G	Sox2_MA0143.3	27	0	+	0	0	.
chr5	74668293	74668294	chr5:74668294:G:A	rs11960249	G	A	G	Sox2_MA0143.3	25	0	+	0	0	.
chr5	74799813	74799814	chr5:74799814:C:T	rs12656070	C	T	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr5	74888185	74888186	chr5:74888186:A:C	rs10942721	A	C	C	Sox2_MA0143.3	6	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr5	75109271	75109272	chr5:75109272:A:G	rs4361493	A	G	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr5	75242859	75242860	chr5:75242860:C:T	rs558768030	C	T	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr5	75405306	75405307	chr5:75405307:T:C	rs60298841	T	C	T	Sox2_MA0143.3	3	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr5	75640570	75640571	chr5:75640571:G:A	rs77302640	G	A	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr5	75653704	75653705	chr5:75653705:T:C	rs11952534	T	C	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr5	75663867	75663868	chr5:75663868:G:A	rs115764360	G	A	g	Sox2_MA0143.3	14	0	+	0	0	.
chr5	75717463	75717464	chr5:75717464:C:A	rs764251583	C	A	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr5	76146450	76146451	chr5:76146451:A:G	rs34253050	A	G	.	Sox2_MA0143.3	-10	0	+	0	0	.
chr5	76166541	76166542	chr5:76166542:G:A	rs3922566	G	A	.	Sox2_MA0143.3	-4	0	+	0	0	.
chr5	76227816	76227817	chr5:76227817:C:G	rs10056151	C	G	G	Sox2_MA0143.3	13	0	+	0	0	.
chr5	76256675	76256676	chr5:76256676:G:A	rs17651538	G	A	A	Sox2_MA0143.3	16	0	+	0	0	.
chr5	76270027	76270028	chr5:76270028:A:G	rs2937718	A	G	A	Sox2_MA0143.3	25	0	-	0	0	.
chr5	76270031	76270032	chr5:76270032:G:T	rs55896719	G	T	G	Sox2_MA0143.3	21	0	-	0	0	.
chr5	76282640	76282641	chr5:76282641:G:T	rs115805223	G	T	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr5	76338041	76338042	chr5:76338042:G:A	rs11954110	G	A	A	Sox2_MA0143.3	-12	0	+	0	0	.
chr5	76338047	76338048	chr5:76338048:G:A	rs534260861	G	A	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr5	76338062	76338063	chr5:76338063:G:A	rs11954779	G	A	A	Sox2_MA0143.3	9	0	+	0	0	.
chr5	76384919	76384920	chr5:76384920:G:A	rs73132443	G	A	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr5	76389263	76389264	chr5:76389264:A:G	rs16873342	A	G	A	Sox2_MA0143.3	27	0	+	0	0	.
chr5	76417865	76417866	chr5:76417866:A:G	rs13157262	A	G	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr5	76462491	76462492	chr5:76462492:T:C	rs10077639	T	C	T	Sox2_MA0143.3	-15	0	+	0	0	.
chr5	76528139	76528140	chr5:76528140:C:T	rs6872396	C	T	T	Sox2_MA0143.3	-3	0	+	0	0	.
chr5	76692556	76692557	chr5:76692557:C:T	rs147472380	C	T	c	Sox2_MA0143.3	8	0	+	0	0	.
chr5	76710616	76710617	chr5:76710617:G:A	rs27950	G	A	A	Sox2_MA0143.3	19	0	+	0	0	.
chr5	76711728	76711729	chr5:76711729:C:T	rs34921325	C	T	C	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr5	76754626	76754627	chr5:76754627:G:C	rs250718	G	C	C	Sox2_MA0143.3	11	0	-	0	0	.
chr5	76804710	76804711	chr5:76804711:T:C	rs13177258	T	C	T	Sox2_MA0143.3	4	1	+	9.206767037375712	2.2980122580604916	CCTTTGTC
chr5	76831309	76831310	chr5:76831310:G:A	rs2243057	G	A	G	Sox2_MA0143.3	17	0	+	0	0	.
chr5	76833227	76833228	chr5:76833228:T:C	rs631465	T	C	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr5	76868126	76868127	chr5:76868127:C:T	rs560976548	C	T	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr5	76913348	76913349	chr5:76913349:C:T	rs6890905	C	T	C	Sox2_MA0143.3	5	1	-	8.676919043985553	1.7681642646703324	CCATTGTG
chr5	76938262	76938263	chr5:76938263:G:C	rs1700683	G	C	C	Sox2_MA0143.3	19	0	+	0	0	.
chr5	77087832	77087833	chr5:77087833:T:C	rs78465673	T	C	T	Sox2_MA0143.3	17	0	-	0	0	.
chr5	77159701	77159702	chr5:77159702:G:A	rs10036159	G	A	g	Sox2_MA0143.3	27	0	-	0	0	.
chr5	77177768	77177769	chr5:77177769:A:G	rs73133477	A	G	A	Sox2_MA0143.3	24	0	-	0	0	.
chr5	77272466	77272467	chr5:77272467:C:A	rs832790	C	A	C	Sox2_MA0143.3	8	0	+	0	0	.
chr5	77431039	77431040	chr5:77431040:A:C	rs335634	A	C	A	Sox2_MA0143.3	25	0	-	0	0	.
chr5	77561087	77561088	chr5:77561088:T:C	chr5:77561088:T:C	T	C	T	Sox2_MA0143.3	3	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr5	77640301	77640302	chr5:77640302:C:A	rs112063260	C	A	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr5	77839299	77839300	chr5:77839300:C:T	rs72772876	C	T	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr5	77925494	77925495	chr5:77925495:C:T	rs2885241	C	T	T	Sox2_MA0143.3	-7	0	-	0	0	.
chr5	77976021	77976022	chr5:77976022:A:G	rs148516333	A	G	A	Sox2_MA0143.3	21	0	+	0	0	.
chr5	78001337	78001338	chr5:78001338:C:T	rs186256315	C	T	C	Sox2_MA0143.3	18	0	-	0	0	.
chr5	78223153	78223154	chr5:78223154:G:C	rs4133339	G	C	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr5	78245279	78245280	chr5:78245280:T:G	rs114441964	T	G	T	Sox2_MA0143.3	-11	0	+	0	0	.
chr5	78522675	78522676	chr5:78522676:G:C	rs113534766	G	C	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr5	78550898	78550899	chr5:78550899:C:G	rs10050475	C	G	G	Sox2_MA0143.3	17	0	-	0	0	.
chr5	78551013	78551014	chr5:78551014:C:A	rs78355510	C	A	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr5	78597999	78598000	chr5:78598000:A:G	rs6876377	A	G	A	Sox2_MA0143.3	3	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr5	78742250	78742251	chr5:78742251:G:A	rs72762921	G	A	G	Sox2_MA0143.3	22	0	-	0	0	.
chr5	78891209	78891210	chr5:78891210:T:A	rs16876045	T	A	T	Sox2_MA0143.3	-4	0	+	0	0	.
chr5	78907753	78907754	chr5:78907754:G:A	rs74914932	G	A	g	Sox2_MA0143.3	-8	0	+	0	0	.
chr5	78907754	78907755	chr5:78907755:G:A	rs116619469	G	A	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr5	78907774	78907775	chr5:78907775:T:C	chr5:78907775:T:C	T	C	T	Sox2_MA0143.3	13	0	+	0	0	.
chr5	78953398	78953399	chr5:78953399:G:C	rs378944	G	C	G	Sox2_MA0143.3	25	0	+	0	0	.
chr5	78972370	78972371	chr5:78972371:C:T	rs12153089	C	T	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr5	79202328	79202329	chr5:79202329:G:C	rs74369390	G	C	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr5	79262124	79262125	chr5:79262125:T:C	rs2607142	T	C	C	Sox2_MA0143.3	6	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr5	79699967	79699968	chr5:79699968:C:G	rs1501912	C	G	C	Sox2_MA0143.3	0	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr5	79785889	79785890	chr5:79785890:A:G	rs6453484	A	G	G	Sox2_MA0143.3	18	0	+	0	0	.
chr5	79810978	79810979	chr5:79810979:G:T	rs11957025	G	T	T	Sox2_MA0143.3	-7	0	+	0	0	.
chr5	79879422	79879423	chr5:79879423:A:G	rs6888630	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr5	80094019	80094020	chr5:80094020:G:A	rs77604342	G	A	G	Sox2_MA0143.3	14	0	-	0	0	.
chr5	80111806	80111807	chr5:80111807:T:C	rs113491810	T	C	T	Sox2_MA0143.3	2	1	-	9.613475778572903	3.494828071296623	CCATTGTT
chr5	80126082	80126083	chr5:80126083:T:C	rs73125912	T	C	T	Sox2_MA0143.3	-15	0	-	0	0	.
chr5	80154055	80154056	chr5:80154056:G:A	rs6859084	G	A	A	Sox2_MA0143.3	-14	0	+	0	0	.
chr5	80159968	80159969	chr5:80159969:A:G	rs73772266	A	G	A	Sox2_MA0143.3	22	0	+	0	0	.
chr5	80192078	80192079	chr5:80192079:T:A	rs141592198	T	A	T	Sox2_MA0143.3	18	0	-	0	0	.
chr5	80231435	80231436	chr5:80231436:C:T	rs72776286	C	T	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr5	80239281	80239282	chr5:80239282:A:C	rs12189352	A	C	A	Sox2_MA0143.3	20	0	-	0	0	.
chr5	80301857	80301858	chr5:80301858:G:T	rs10474015	G	T	-	Sox2_MA0143.3	15	0	-	0	0	.
chr5	80302826	80302827	chr5:80302827:A:G	rs10074004	A	G	A	Sox2_MA0143.3	17	0	+	0	0	.
chr5	80305860	80305861	chr5:80305861:G:A	rs62364055	G	A	g	Sox2_MA0143.3	-5	0	+	0	0	.
chr5	80466569	80466570	chr5:80466570:T:C	rs249024	T	C	T	Sox2_MA0143.3	4	1	+	9.206767037375712	2.2980122580604916	CCTTTGTC
chr5	80481536	80481537	chr5:80481537:C:T	rs79961273	C	T	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr5	80487120	80487121	chr5:80487121:A:G	rs249004	A	G	G	Sox2_MA0143.3	-5	0	+	0	0	.
chr5	80675792	80675793	chr5:80675793:A:G	rs6151653	A	G	A	Sox2_MA0143.3	-19	0	-	0	0	.
chr5	80841511	80841512	chr5:80841512:C:G	rs11950254	C	G	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr5	80927793	80927794	chr5:80927794:G:C	rs10035466	G	C	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr5	81016015	81016016	chr5:81016016:A:C	rs508636	A	C	A	Sox2_MA0143.3	14	0	-	0	0	.
chr5	81047665	81047666	chr5:81047666:A:C	rs422765	A	C	A	Sox2_MA0143.3	-16	0	+	0	0	.
chr5	81167115	81167116	chr5:81167116:G:T	rs10942943	G	T	G	Sox2_MA0143.3	5	1	+	8.676919043985553	1.7681642646703324	CCATTGTG
chr5	81225546	81225547	chr5:81225547:T:G	rs532126482	T	G	T	Sox2_MA0143.3	-9	0	-	0	0	.
chr5	81546072	81546073	chr5:81546073:C:T	rs2973341	C	T	T	Sox2_MA0143.3	16	0	-	0	0	.
chr5	81546094	81546095	chr5:81546095:A:G	rs10942267	A	G	A	Sox2_MA0143.3	-6	0	-	0	0	.
chr5	81744621	81744622	chr5:81744622:A:C	rs13160079	A	C	A	Sox2_MA0143.3	6	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr5	81786597	81786598	chr5:81786598:T:A	rs59021164	T	A	T	Sox2_MA0143.3	26	0	-	0	0	.
chr5	81786627	81786628	chr5:81786628:G:C	rs16899184	G	C	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr5	81849034	81849035	chr5:81849035:G:A	rs1472612	G	A	A	Sox2_MA0143.3	14	0	+	0	0	.
chr5	81852520	81852521	chr5:81852521:A:G	rs777589373	A	G	A	Sox2_MA0143.3	7	1	-	9.800647049772198	9.206767037375712	CCTTTGTT
chr5	81971784	81971785	chr5:81971785:G:C	chr5:81971785:G:C	G	C	G	Sox2_MA0143.3	5	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr5	82018731	82018732	chr5:82018732:G:T	rs77327120	G	T	G	Sox2_MA0143.3	7	1	+	8.864090315184848	9.800647049772198	CCTTTGTG
chr5	82023886	82023887	chr5:82023887:C:T	rs72776825	C	T	C	Sox2_MA0143.3	13	0	-	0	0	.
chr5	82105694	82105695	chr5:82105695:C:T	rs188423897	C	T	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr5	82150773	82150774	chr5:82150774:C:A	rs554454056	C	A	C	Sox2_MA0143.3	15	0	+	0	0	.
chr5	82155487	82155488	chr5:82155488:C:T	rs73768633	C	T	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr5	82531948	82531949	chr5:82531949:G:A	rs115995490	G	A	G	Sox2_MA0143.3	10	0	+	0	0	.
chr5	82560891	82560892	chr5:82560892:A:C	rs78788723	A	C	A	Sox2_MA0143.3	12	0	+	0	0	.
chr5	82621105	82621106	chr5:82621106:G:A	rs114319462	G	A	G	Sox2_MA0143.3	1	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr5	82641617	82641618	chr5:82641618:G:T	rs550844057	G	T	G	Sox2_MA0143.3	5	1	+	8.676919043985553	1.7681642646703324	CCATTGTG
chr5	82881556	82881557	chr5:82881557:T:A	rs4642348	T	A	t	Sox2_MA0143.3	25	0	-	0	0	.
chr5	83096386	83096387	chr5:83096387:C:T	rs72767114	C	T	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr5	83167883	83167884	chr5:83167884:C:T	rs67683443	C	T	C	Sox2_MA0143.3	16	0	-	0	0	.
chr5	83281839	83281840	chr5:83281840:A:G	rs16900281	A	G	A	Sox2_MA0143.3	20	0	-	0	0	.
chr5	83371818	83371819	chr5:83371819:G:A	rs4703568	G	A	G	Sox2_MA0143.3	16	0	+	0	0	.
chr5	83386951	83386952	chr5:83386952:G:C	rs16900383	G	C	G	Sox2_MA0143.3	26	0	+	0	0	.
chr5	83472963	83472964	chr5:83472964:C:T	rs138766687	C	T	C	Sox2_MA0143.3	-12	0	-	0	0	.
chr5	83615878	83615879	chr5:83615879:C:A	rs2607147	C	A	A	Sox2_MA0143.3	-15	0	+	0	0	.
chr5	83615886	83615887	chr5:83615887:C:T	rs2607146	C	T	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr5	83616619	83616620	chr5:83616620:G:A	rs72771283	G	A	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr5	83661529	83661530	chr5:83661530:T:C	rs11950853	T	C	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr5	83984043	83984044	chr5:83984044:A:C	rs4703573	A	C	C	Sox2_MA0143.3	14	0	-	0	0	.
chr5	84540817	84540818	chr5:84540818:C:T	rs17285006	C	T	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr5	84688116	84688117	chr5:84688117:G:A	rs112934083	G	A	G	Sox2_MA0143.3	26	0	-	0	0	.
chr5	84688155	84688156	chr5:84688156:C:A	rs111745408	C	A	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr5	84688158	84688159	chr5:84688159:C:A	rs10942352	C	A	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr5	84719947	84719948	chr5:84719948:C:G	rs79058305	C	G	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr5	84722454	84722455	chr5:84722455:G:A	rs79837101	G	A	G	Sox2_MA0143.3	-3	0	+	0	0	.
chr5	84724903	84724904	chr5:84724904:C:T	rs76574793	C	T	C	Sox2_MA0143.3	8	0	-	0	0	.
chr5	84769555	84769556	chr5:84769556:T:C	rs6871305	T	C	T	Sox2_MA0143.3	14	0	+	0	0	.
chr5	84872005	84872006	chr5:84872006:T:C	rs4235662	T	C	T	Sox2_MA0143.3	-18	0	-	0	0	.
chr5	84994320	84994321	chr5:84994321:G:A	rs1510405	G	A	G	Sox2_MA0143.3	1	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr5	85390556	85390557	chr5:85390557:T:A	rs112591272	T	A	T	Sox2_MA0143.3	-10	0	-	0	0	.
chr5	85441640	85441641	chr5:85441641:C:A	rs72772230	C	A	C	Sox2_MA0143.3	8	0	+	0	0	.
chr5	85459206	85459207	chr5:85459207:A:G	rs248294	A	G	A	Sox2_MA0143.3	4	1	-	8.676919043985553	1.7681642646703322	CCATTGTG
chr5	85721255	85721256	chr5:85721256:C:G	rs62363065	C	G	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr5	85799617	85799618	chr5:85799618:A:G	rs116309909	A	G	A	Sox2_MA0143.3	22	0	-	0	0	.
chr5	86272915	86272916	chr5:86272916:C:T	rs62373397	C	T	c	Sox2_MA0143.3	-5	0	-	0	0	.
chr5	86617439	86617440	chr5:86617440:C:T	rs138922597	C	T	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr5	86716435	86716436	chr5:86716436:A:C	rs254741	A	C	A	Sox2_MA0143.3	-4	0	+	0	0	.
chr5	86750187	86750188	chr5:86750188:T:C	rs12332473	T	C	T	Sox2_MA0143.3	21	0	-	0	0	.
chr5	86763851	86763852	chr5:86763852:G:A	rs17207219	G	A	G	Sox2_MA0143.3	1	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr5	87099207	87099208	chr5:87099208:C:T	rs79267348	C	T	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr5	87169433	87169434	chr5:87169434:T:C	rs115090548	T	C	T	Sox2_MA0143.3	15	0	-	0	0	.
chr5	87588496	87588497	chr5:87588497:G:A	rs13175472	G	A	G	Sox2_MA0143.3	27	0	+	0	0	.
chr5	87674444	87674445	chr5:87674445:C:A	rs1098501	C	A	C	Sox2_MA0143.3	13	0	-	0	0	.
chr5	87784553	87784554	chr5:87784554:A:C	rs6897002	A	C	A	Sox2_MA0143.3	17	0	-	0	0	.
chr5	87873018	87873019	chr5:87873019:G:A	rs115220017	G	A	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr5	87949572	87949573	chr5:87949573:A:G	rs4916772	A	G	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr5	88378042	88378043	chr5:88378043:C:G	rs146614540	C	G	C	Sox2_MA0143.3	25	0	-	0	0	.
chr5	88830787	88830788	chr5:88830788:C:A	rs1490398949	C	A	C	Sox2_MA0143.3	10	0	-	0	0	.
chr5	88868069	88868070	chr5:88868070:G:A	rs113217867	G	A	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr5	89053804	89053805	chr5:89053805:G:A	rs6867144	G	A	A	Sox2_MA0143.3	-18	0	-	0	0	.
chr5	89292484	89292485	chr5:89292485:T:C	rs4916749	T	C	T	Sox2_MA0143.3	22	0	-	0	0	.
chr5	89325105	89325106	chr5:89325106:T:C	rs16867543	T	C	T	Sox2_MA0143.3	-8	0	-	0	0	.
chr5	89398166	89398167	chr5:89398167:A:G	rs12653245	A	G	A	Sox2_MA0143.3	8	0	+	0	0	.
chr5	89418085	89418086	chr5:89418086:G:A	rs116669396	G	A	G	Sox2_MA0143.3	19	0	+	0	0	.
chr5	89794748	89794749	chr5:89794749:G:A	rs187760896	G	A	G	Sox2_MA0143.3	-14	0	+	0	0	.
chr5	89794752	89794753	chr5:89794753:T:C	rs819359	T	C	T	Sox2_MA0143.3	-10	0	+	0	0	.
chr5	90342761	90342762	chr5:90342762:C:T	rs7727878	C	T	C	Sox2_MA0143.3	27	0	-	0	0	.
chr5	90342779	90342780	chr5:90342780:C:T	rs57819984	C	T	C	Sox2_MA0143.3	9	0	-	0	0	.
chr5	90517627	90517628	chr5:90517628:T:C	rs27601	T	C	T	Sox2_MA0143.3	14	0	+	0	0	.
chr5	90557524	90557525	chr5:90557525:G:C	rs37241	G	C	G	Sox2_MA0143.3	26	0	+	0	0	.
chr5	90700511	90700512	chr5:90700512:G:A	rs16869013	G	A	G	Sox2_MA0143.3	1	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr5	90807669	90807670	chr5:90807670:T:C	rs7729495	T	C	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr5	90956611	90956612	chr5:90956612:A:G	rs6452917	A	G	A	Sox2_MA0143.3	25	0	+	0	0	.
chr5	91020672	91020673	chr5:91020673:T:C	rs116624629	T	C	T	Sox2_MA0143.3	16	0	+	0	0	.
chr5	91101911	91101912	chr5:91101912:A:G	rs6859589	A	G	A	Sox2_MA0143.3	-18	0	+	0	0	.
chr5	91162959	91162960	chr5:91162960:C:G	rs78785684	C	G	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr5	91235582	91235583	chr5:91235583:C:T	rs10942627	C	T	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr5	91235583	91235584	chr5:91235584:A:G	rs28529720	A	G	A	Sox2_MA0143.3	-10	0	+	0	0	.
chr5	91281337	91281338	chr5:91281338:A:G	rs181543479	A	G	A	Sox2_MA0143.3	25	0	+	0	0	.
chr5	91313905	91313906	chr5:91313906:C:T	chr5:91313906:C:T	C	T	C	Sox2_MA0143.3	5	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr5	91313918	91313919	chr5:91313919:A:G	rs9293565	A	G	A	Sox2_MA0143.3	-8	0	-	0	0	.
chr5	91313926	91313927	chr5:91313927:A:G	rs116379558	A	G	A	Sox2_MA0143.3	-16	0	-	0	0	.
chr5	92132475	92132476	chr5:92132476:T:C	rs1013768199	T	C	T	Sox2_MA0143.3	7	1	-	3.5547341015215945	8.864090315184848	CCTTTGTA
chr5	92419802	92419803	chr5:92419803:A:G	rs115662819	A	G	A	Sox2_MA0143.3	10	0	+	0	0	.
chr5	92713879	92713880	chr5:92713880:G:C	rs75175665	G	C	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr5	92769270	92769271	chr5:92769271:T:C	rs7734479	T	C	C	Sox2_MA0143.3	22	0	+	0	0	.
chr5	92916132	92916133	chr5:92916133:C:A	rs67632512	C	A	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr5	92979935	92979936	chr5:92979936:A:G	rs151092410	A	G	A	Sox2_MA0143.3	-2	0	-	0	0	.
chr5	93219670	93219671	chr5:93219671:A:G	rs7442897	A	G	A	Sox2_MA0143.3	-18	0	+	0	0	.
chr5	93351861	93351862	chr5:93351862:C:A	rs2343708	C	A	A	Sox2_MA0143.3	-13	0	+	0	0	.
chr5	93574041	93574042	chr5:93574042:C:A	rs73135306	C	A	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr5	93575718	93575719	chr5:93575719:G:A	rs114094779	G	A	A	Sox2_MA0143.3	17	0	+	0	0	.
chr5	93597827	93597828	chr5:93597828:T:G	rs1004941	T	G	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr5	94432656	94432657	chr5:94432657:C:T	rs61174820	C	T	c	Sox2_MA0143.3	26	0	-	0	0	.
chr5	94461573	94461574	chr5:94461574:C:G	rs62364609	C	G	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr5	94617752	94617753	chr5:94617753:T:C	rs759326917	T	C	T	Sox2_MA0143.3	-2	0	+	0	0	.
chr5	94702447	94702448	chr5:94702448:A:C	rs845726	A	C	A	Sox2_MA0143.3	-3	0	+	0	0	.
chr5	94775609	94775610	chr5:94775610:T:G	rs255375	T	G	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr5	94951798	94951799	chr5:94951799:G:C	rs10452513	G	C	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr5	95076855	95076856	chr5:95076856:A:T	rs10061397	A	T	T	Sox2_MA0143.3	-18	0	+	0	0	.
chr5	95192795	95192796	chr5:95192796:G:A	rs6556861	G	A	A	Sox2_MA0143.3	23	0	-	0	0	.
chr5	95224099	95224100	chr5:95224100:G:T	rs12108709	G	T	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr5	95274207	95274208	chr5:95274208:A:G	rs463587	A	G	A	Sox2_MA0143.3	-14	0	+	0	0	.
chr5	95318101	95318102	chr5:95318102:C:T	rs255981	C	T	T	Sox2_MA0143.3	18	0	-	0	0	.
chr5	95391174	95391175	chr5:95391175:C:T	rs2560266	C	T	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr5	95731147	95731148	chr5:95731148:C:T	rs569810177	C	T	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr5	95732231	95732232	chr5:95732232:C:T	rs41276255	C	T	C	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr5	95797257	95797258	chr5:95797258:A:G	rs528336740	A	G	A	Sox2_MA0143.3	-1	0	+	0	0	.
chr5	95798257	95798258	chr5:95798258:T:C	rs141616922	T	C	T	Sox2_MA0143.3	2	1	-	9.613475778572903	3.494828071296623	CCATTGTT
chr5	95807893	95807894	chr5:95807894:C:T	rs11135434	C	T	T	Sox2_MA0143.3	11	0	-	0	0	.
chr5	95823014	95823015	chr5:95823015:G:C	rs140260581	G	C	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr5	95859098	95859099	chr5:95859099:G:C	rs1013761591	G	C	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr5	95939090	95939091	chr5:95939091:C:T	rs6881355	C	T	T	Sox2_MA0143.3	22	0	+	0	0	.
chr5	95945143	95945144	chr5:95945144:T:A	rs17085333	T	A	T	Sox2_MA0143.3	16	0	-	0	0	.
chr5	96118664	96118665	chr5:96118665:A:C	rs4077350	A	C	C	Sox2_MA0143.3	15	0	+	0	0	.
chr5	96220889	96220890	chr5:96220890:C:T	rs116188153	C	T	c	Sox2_MA0143.3	1	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr5	96377517	96377518	chr5:96377518:G:T	rs1695218	G	T	T	Sox2_MA0143.3	19	0	+	0	0	.
chr5	96511068	96511069	chr5:96511069:G:C	rs3853211	G	C	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr5	96601699	96601700	chr5:96601700:T:A	rs261216	T	A	.	Sox2_MA0143.3	-1	0	+	0	0	.
chr5	96601708	96601709	chr5:96601709:C:A	rs182003	C	A	.	Sox2_MA0143.3	8	0	+	0	0	.
chr5	96715906	96715907	chr5:96715907:C:T	rs563937617	C	T	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr5	96715922	96715923	chr5:96715923:T:C	rs113974305	T	C	T	Sox2_MA0143.3	-1	0	+	0	0	.
chr5	96777249	96777250	chr5:96777250:A:G	rs27038	A	G	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr5	96909813	96909814	chr5:96909814:A:G	rs2549797	A	G	A	Sox2_MA0143.3	26	0	+	0	0	.
chr5	96934486	96934487	chr5:96934487:T:A	rs113919969	T	A	T	Sox2_MA0143.3	6	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr5	96935020	96935021	chr5:96935021:G:A	rs3806940	G	A	G	Sox2_MA0143.3	25	0	-	0	0	.
chr5	96935023	96935024	chr5:96935024:C:A	rs3806941	C	A	C	Sox2_MA0143.3	22	0	-	0	0	.
chr5	96943785	96943786	chr5:96943786:A:G	rs10051637	A	G	A	Sox2_MA0143.3	-19	0	-	0	0	.
chr5	96954525	96954526	chr5:96954526:G:A	rs7703341	G	A	A	Sox2_MA0143.3	-7	0	+	0	0	.
chr5	96957339	96957340	chr5:96957340:C:T	rs77373332	C	T	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr5	96957345	96957346	chr5:96957346:T:A	rs141882332	T	A	T	Sox2_MA0143.3	2	1	+	3.5547341015215945	3.3675628303222993	CCTTTGTA
chr5	96984881	96984882	chr5:96984882:T:C	rs9314181	T	C	C	Sox2_MA0143.3	12	0	+	0	0	.
chr5	97079397	97079398	chr5:97079398:C:T	rs316226	C	T	T	Sox2_MA0143.3	27	0	-	0	0	.
chr5	97095088	97095089	chr5:97095089:C:T	rs115454614	C	T	C	Sox2_MA0143.3	-5	0	-	0	0	.
chr5	97136160	97136161	chr5:97136161:T:C	rs567589271	T	C	T	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr5	97267826	97267827	chr5:97267827:A:G	rs2643532	A	G	A	Sox2_MA0143.3	2	1	-	3.5547341015215945	-2.751084876953981	CCTTTGTA
chr5	97269114	97269115	chr5:97269115:T:C	rs1908530	T	C	C	Sox2_MA0143.3	19	0	+	0	0	.
chr5	97481823	97481824	chr5:97481824:A:G	rs1485469	A	G	A	Sox2_MA0143.3	-9	0	-	0	0	.
chr5	97495038	97495039	chr5:97495039:G:A	rs1485458	G	A	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr5	97545723	97545724	chr5:97545724:T:G	rs10476720	T	G	G	Sox2_MA0143.3	4	1	+	9.206767037375712	2.2980122580604916	CCTTTGTC
chr5	97546177	97546178	chr5:97546178:A:G	rs4869170	A	G	A	Sox2_MA0143.3	21	0	-	0	0	.
chr5	97735697	97735698	chr5:97735698:A:C	rs1429863	A	C	C	Sox2_MA0143.3	4	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr5	97798142	97798143	chr5:97798143:A:G	rs34473232	A	G	A	Sox2_MA0143.3	-20	0	+	0	0	.
chr5	97798179	97798180	chr5:97798180:G:A	rs35162975	G	A	G	Sox2_MA0143.3	17	0	+	0	0	.
chr5	97918317	97918318	chr5:97918318:C:A	rs73154998	C	A	A	Sox2_MA0143.3	13	0	+	0	0	.
chr5	98064729	98064730	chr5:98064730:G:A	rs148733276	G	A	.	Sox2_MA0143.3	-2	0	+	0	0	.
chr5	98109881	98109882	chr5:98109882:T:C	rs79535686	T	C	.	Sox2_MA0143.3	-19	0	+	0	0	.
chr5	98121011	98121012	chr5:98121012:A:G	rs11952918	A	G	G	Sox2_MA0143.3	14	0	-	0	0	.
chr5	98141631	98141632	chr5:98141632:T:A	rs6890059	T	A	T	Sox2_MA0143.3	-18	0	+	0	0	.
chr5	98335105	98335106	chr5:98335106:C:T	rs10050404	C	T	T	Sox2_MA0143.3	24	0	-	0	0	.
chr5	98341536	98341537	chr5:98341537:G:A	rs112434769	G	A	G	Sox2_MA0143.3	20	0	+	0	0	.
chr5	98425548	98425549	chr5:98425549:A:G	rs17165943	A	G	G	Sox2_MA0143.3	9	0	-	0	0	.
chr5	98438759	98438760	chr5:98438760:C:T	rs1840493	C	T	C	Sox2_MA0143.3	8	0	+	0	0	.
chr5	98510322	98510323	chr5:98510323:C:A	rs143936851	C	A	C	Sox2_MA0143.3	18	0	-	0	0	.
chr5	98773299	98773300	chr5:98773300:G:A	chr5:98773300:G:A	G	A	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr5	98773299	98773300	chr5:98773300:G:T	rs1480323403	G	T	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr5	98786113	98786114	chr5:98786114:T:C	rs75404688	T	C	T	Sox2_MA0143.3	-2	0	+	0	0	.
chr5	98786125	98786126	chr5:98786126:A:G	rs2545677	A	G	A	Sox2_MA0143.3	10	0	+	0	0	.
chr5	98861794	98861795	chr5:98861795:C:T	rs12654682	C	T	C	Sox2_MA0143.3	8	0	+	0	0	.
chr5	98916783	98916784	chr5:98916784:T:C	rs161749	T	C	T	Sox2_MA0143.3	24	0	-	0	0	.
chr5	98927297	98927298	chr5:98927298:C:A	rs374562450	C	A	C	Sox2_MA0143.3	24	0	-	0	0	.
chr5	99134224	99134225	chr5:99134225:G:A	rs7725663	G	A	A	Sox2_MA0143.3	-20	0	-	0	0	.
chr5	99258948	99258949	chr5:99258949:C:T	rs61141076	C	T	G	Sox2_MA0143.3	-12	0	+	0	0	.
chr5	99359412	99359413	chr5:99359413:A:G	rs2948770	A	G	A	Sox2_MA0143.3	-15	0	-	0	0	.
chr5	99462223	99462224	chr5:99462224:G:A	rs13171160	G	A	.	Sox2_MA0143.3	-6	0	-	0	0	.
chr5	99472166	99472167	chr5:99472167:T:A	rs2511973	T	A	.	Sox2_MA0143.3	2	1	+	9.800647049772198	9.613475778572903	CCTTTGTT
chr5	99526132	99526133	chr5:99526133:A:G	rs1177621293	A	G	a	Sox2_MA0143.3	4	1	-	8.864090315184848	1.9553355358696274	CCTTTGTG
chr5	99660836	99660837	chr5:99660837:A:C	rs3911768	A	C	C	Sox2_MA0143.3	6	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr5	99702684	99702685	chr5:99702685:G:T	rs12656620	G	T	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr5	99811388	99811389	chr5:99811389:T:A	rs74646363	T	A	T	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr5	99931633	99931634	chr5:99931634:C:T	rs3853596	C	T	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr5	100388202	100388203	chr5:100388203:T:C	rs370551280	T	C	t	Sox2_MA0143.3	4	1	+	8.864090315184848	1.9553355358696274	CCTTTGTG
chr5	100488957	100488958	chr5:100488958:G:C	rs6889179	G	C	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr5	100596232	100596233	chr5:100596233:T:C	rs247963	T	C	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr5	100644978	100644979	chr5:100644979:G:C	rs905828	G	C	C	Sox2_MA0143.3	26	0	-	0	0	.
chr5	100644995	100644996	chr5:100644996:A:G	rs10053862	A	G	A	Sox2_MA0143.3	9	0	-	0	0	.
chr5	100691538	100691539	chr5:100691539:G:A	rs2590421	G	A	G	Sox2_MA0143.3	27	0	+	0	0	.
chr5	100775009	100775010	chr5:100775010:G:A	rs112745734	G	A	G	Sox2_MA0143.3	17	0	+	0	0	.
chr5	100864939	100864940	chr5:100864940:T:A	rs2059845	T	A	T	Sox2_MA0143.3	18	0	+	0	0	.
chr5	100901437	100901438	chr5:100901438:T:C	rs974247606	T	C	T	Sox2_MA0143.3	-10	0	+	0	0	.
chr5	100902720	100902721	chr5:100902721:C:T	rs45470102	C	T	C	Sox2_MA0143.3	23	0	+	0	0	.
chr5	101242272	101242273	chr5:101242273:G:C	rs6877155	G	C	G	Sox2_MA0143.3	11	0	-	0	0	.
chr5	101315719	101315720	chr5:101315720:G:A	rs4703150	G	A	g	Sox2_MA0143.3	-7	0	-	0	0	.
chr5	101423746	101423747	chr5:101423747:C:T	rs73780748	C	T	c	Sox2_MA0143.3	10	0	-	0	0	.
chr5	101442197	101442198	chr5:101442198:C:T	rs114602084	C	T	C	Sox2_MA0143.3	5	1	-	9.019595766176417	2.110840986861197	CCATTGTC
chr5	101442203	101442204	chr5:101442204:G:A	rs349324	G	A	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr5	101529412	101529413	chr5:101529413:G:T	rs350541	G	T	g	Sox2_MA0143.3	-13	0	+	0	0	.
chr5	101597235	101597236	chr5:101597236:T:C	rs11749807	T	C	T	Sox2_MA0143.3	25	0	-	0	0	.
chr5	101597276	101597277	chr5:101597277:A:G	rs3907457	A	G	A	Sox2_MA0143.3	-16	0	-	0	0	.
chr5	101673433	101673434	chr5:101673434:A:G	rs4703168	A	G	G	Sox2_MA0143.3	23	0	+	0	0	.
chr5	101942457	101942458	chr5:101942458:A:G	rs10479094	A	G	A	Sox2_MA0143.3	7	1	+	3.5547341015215945	8.864090315184848	CCTTTGTA
chr5	101995814	101995815	chr5:101995815:A:G	rs1155174	A	G	G	Sox2_MA0143.3	6	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr5	102211116	102211117	chr5:102211117:A:C	rs60420300	A	C	A	Sox2_MA0143.3	23	0	-	0	0	.
chr5	102238872	102238873	chr5:102238873:C:T	rs10078106	C	T	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr5	102584150	102584151	chr5:102584151:T:C	rs72781841	T	C	T	Sox2_MA0143.3	2	1	-	9.613475778572903	3.494828071296623	CCATTGTT
chr5	102782374	102782375	chr5:102782375:C:T	rs2431318	C	T	T	Sox2_MA0143.3	10	0	+	0	0	.
chr5	102782375	102782376	chr5:102782376:C:T	rs2431319	C	T	C	Sox2_MA0143.3	11	0	+	0	0	.
chr5	102801542	102801543	chr5:102801543:A:G	rs258145	A	G	G	Sox2_MA0143.3	-2	0	+	0	0	.
chr5	102879997	102879998	chr5:102879998:T:A	rs7737326	T	A	T	Sox2_MA0143.3	22	0	+	0	0	.
chr5	102879997	102879998	chr5:102879998:T:C	chr5:102879998:T:C	T	C	T	Sox2_MA0143.3	22	0	+	0	0	.
chr5	102911563	102911564	chr5:102911564:A:C	rs9327875	A	C	C	Sox2_MA0143.3	16	0	-	0	0	.
chr5	102986200	102986201	chr5:102986201:C:T	rs56372231	C	T	T	Sox2_MA0143.3	-20	0	-	0	0	.
chr5	103203381	103203382	chr5:103203382:A:C	rs76618416	A	C	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr5	103259837	103259838	chr5:103259838:T:C	rs542187822	T	C	T	Sox2_MA0143.3	-15	0	+	0	0	.
chr5	103433266	103433267	chr5:103433267:T:G	rs10065975	T	G	T	Sox2_MA0143.3	8	0	+	0	0	.
chr5	103444428	103444429	chr5:103444429:C:T	rs17155380	C	T	C	Sox2_MA0143.3	1	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr5	103490242	103490243	chr5:103490243:T:A	rs291846	T	A	T	Sox2_MA0143.3	-2	0	+	0	0	.
chr5	103512841	103512842	chr5:103512842:C:G	rs294093	C	G	C	Sox2_MA0143.3	0	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr5	103575040	103575041	chr5:103575041:T:G	rs113887299	T	G	t	Sox2_MA0143.3	-20	0	+	0	0	.
chr5	103624128	103624129	chr5:103624129:A:G	rs151019076	A	G	a	Sox2_MA0143.3	15	0	-	0	0	.
chr5	103801146	103801147	chr5:103801147:C:T	rs17336381	C	T	C	Sox2_MA0143.3	10	0	+	0	0	.
chr5	103915446	103915447	chr5:103915447:T:A	rs808045	T	A	T	Sox2_MA0143.3	-15	0	-	0	0	.
chr5	103943028	103943029	chr5:103943029:A:G	rs10463999	A	G	A	Sox2_MA0143.3	6	1	-	9.613475778572903	2.7047209992576837	CCATTGTT
chr5	104025774	104025775	chr5:104025775:A:T	rs10056273	A	T	A	Sox2_MA0143.3	-17	0	-	0	0	.
chr5	104274766	104274767	chr5:104274767:A:C	rs17342020	A	C	A	Sox2_MA0143.3	20	0	-	0	0	.
chr5	104274789	104274790	chr5:104274790:C:T	rs17342041	C	T	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr5	104867070	104867071	chr5:104867071:T:G	rs1708591	T	G	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr5	104947529	104947530	chr5:104947530:A:T	rs116579291	A	T	a	Sox2_MA0143.3	-1	0	-	0	0	.
chr5	105522249	105522250	chr5:105522250:T:C	rs55979630	T	C	T	Sox2_MA0143.3	-11	0	+	0	0	.
chr5	106047478	106047479	chr5:106047479:G:T	rs75252900	G	T	G	Sox2_MA0143.3	19	0	+	0	0	.
chr5	106246849	106246850	chr5:106246850:C:A	rs13355123	C	A	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr5	106418426	106418427	chr5:106418427:G:A	rs36104185	G	A	.	Sox2_MA0143.3	-7	0	-	0	0	.
chr5	106455253	106455254	chr5:106455254:C:A	rs77012855	C	A	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr5	106524085	106524086	chr5:106524086:C:T	rs55682464	C	T	C	Sox2_MA0143.3	1	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr5	106680762	106680763	chr5:106680763:A:G	rs12517078	A	G	A	Sox2_MA0143.3	-7	0	+	0	0	.
chr5	106698416	106698417	chr5:106698417:G:T	rs61694561	G	T	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr5	106698441	106698442	chr5:106698442:G:A	rs72782360	G	A	G	Sox2_MA0143.3	5	1	+	9.019595766176417	2.110840986861197	CCATTGTC
chr5	106960262	106960263	chr5:106960263:C:T	rs6860967	C	T	T	Sox2_MA0143.3	13	0	+	0	0	.
chr5	107027546	107027547	chr5:107027547:C:T	rs6864852	C	T	T	Sox2_MA0143.3	-19	0	-	0	0	.
chr5	107104709	107104710	chr5:107104710:C:T	rs76816044	C	T	C	Sox2_MA0143.3	21	0	-	0	0	.
chr5	107153835	107153836	chr5:107153836:A:G	rs1030172	A	G	G	Sox2_MA0143.3	11	0	+	0	0	.
chr5	107242557	107242558	chr5:107242558:A:G	rs929765	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr5	107262749	107262750	chr5:107262750:G:A	rs142732999	G	A	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr5	107293477	107293478	chr5:107293478:A:G	rs7735115	A	G	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr5	107400655	107400656	chr5:107400656:C:T	rs252811	C	T	T	Sox2_MA0143.3	-17	0	-	0	0	.
chr5	107428590	107428591	chr5:107428591:G:A	rs11242636	G	A	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr5	107468216	107468217	chr5:107468217:T:C	rs151957	T	C	T	Sox2_MA0143.3	24	0	+	0	0	.
chr5	107514592	107514593	chr5:107514593:G:A	rs17160093	G	A	g	Sox2_MA0143.3	17	0	-	0	0	.
chr5	107572733	107572734	chr5:107572734:C:T	rs624548	C	T	T	Sox2_MA0143.3	14	0	+	0	0	.
chr5	107581319	107581320	chr5:107581320:C:A	rs34052514	C	A	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr5	107608571	107608572	chr5:107608572:G:A	rs26724	G	A	A	Sox2_MA0143.3	27	0	+	0	0	.
chr5	107769231	107769232	chr5:107769232:G:C	rs10072135	G	C	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr5	107795171	107795172	chr5:107795172:C:G	rs62355927	C	G	C	Sox2_MA0143.3	20	0	+	0	0	.
chr5	107869813	107869814	chr5:107869814:C:T	rs148627692	C	T	C	Sox2_MA0143.3	12	0	+	0	0	.
chr5	107915909	107915910	chr5:107915910:T:G	rs11242654	T	G	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr5	107919375	107919376	chr5:107919376:T:C	rs12522338	T	C	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr5	108067794	108067795	chr5:108067795:T:C	rs286748	T	C	C	Sox2_MA0143.3	24	0	-	0	0	.
chr5	108144047	108144048	chr5:108144048:G:A	rs78679892	G	A	G	Sox2_MA0143.3	18	0	-	0	0	.
chr5	108531948	108531949	chr5:108531949:C:G	rs10079539	C	G	C	Sox2_MA0143.3	10	0	+	0	0	.
chr5	108581207	108581208	chr5:108581208:T:C	rs10065061	T	C	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr5	108686798	108686799	chr5:108686799:C:G	chr5:108686799:C:G	C	G	C	Sox2_MA0143.3	24	0	-	0	0	.
chr5	108686841	108686842	chr5:108686842:T:C	rs75283328	T	C	T	Sox2_MA0143.3	-19	0	-	0	0	.
chr5	108878187	108878188	chr5:108878188:G:T	rs59821709	G	T	T	Sox2_MA0143.3	-20	0	+	0	0	.
chr5	109022243	109022244	chr5:109022244:A:C	rs73780406	A	C	A	Sox2_MA0143.3	-4	0	+	0	0	.
chr5	109063468	109063469	chr5:109063469:T:A	rs75268967	T	A	T	Sox2_MA0143.3	14	0	-	0	0	.
chr5	109125890	109125891	chr5:109125891:T:G	rs9285864	T	G	T	Sox2_MA0143.3	-20	0	+	0	0	.
chr5	109236273	109236274	chr5:109236274:C:T	rs7730359	C	T	T	Sox2_MA0143.3	-7	0	+	0	0	.
chr5	109255952	109255953	chr5:109255953:C:T	rs72793039	C	T	T	Sox2_MA0143.3	9	0	-	0	0	.
chr5	109326236	109326237	chr5:109326237:T:C	rs7722073	T	C	T	Sox2_MA0143.3	13	0	+	0	0	.
chr5	109453897	109453898	chr5:109453898:A:C	rs1428930	A	C	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr5	109470652	109470653	chr5:109470653:G:A	rs4530811	G	A	A	Sox2_MA0143.3	5	1	+	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr5	109617800	109617801	chr5:109617801:A:C	rs11743954	A	C	A	Sox2_MA0143.3	20	0	-	0	0	.
chr5	109658284	109658285	chr5:109658285:G:A	rs76962917	G	A	G	Sox2_MA0143.3	14	0	-	0	0	.
chr5	109670970	109670971	chr5:109670971:A:T	rs113787341	A	T	T	Sox2_MA0143.3	-12	0	+	0	0	.
chr5	109688976	109688977	chr5:109688977:C:T	rs77205127	C	T	C	Sox2_MA0143.3	11	0	+	0	0	.
chr5	109700364	109700365	chr5:109700365:C:T	rs4388249	C	T	C	Sox2_MA0143.3	1	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr5	109701200	109701201	chr5:109701201:A:T	rs145039141	A	T	A	Sox2_MA0143.3	-18	0	-	0	0	.
chr5	109884727	109884728	chr5:109884728:G:A	rs34826583	G	A	G	Sox2_MA0143.3	22	0	+	0	0	.
chr5	110139444	110139445	chr5:110139445:G:A	rs11241053	G	A	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr5	110338677	110338678	chr5:110338678:C:T	rs112622971	C	T	T	Sox2_MA0143.3	13	0	-	0	0	.
chr5	110631248	110631249	chr5:110631249:G:A	rs28497043	G	A	G	Sox2_MA0143.3	1	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr5	110768574	110768575	chr5:110768575:T:C	rs17132345	T	C	T	Sox2_MA0143.3	9	0	-	0	0	.
chr5	110769462	110769463	chr5:110769463:G:A	rs244431	G	A	G	Sox2_MA0143.3	13	0	-	0	0	.
chr5	110828974	110828975	chr5:110828975:C:T	rs7728612	C	T	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr5	110828991	110828992	chr5:110828992:A:G	rs7728605	A	G	G	Sox2_MA0143.3	12	0	+	0	0	.
chr5	111131538	111131539	chr5:111131539:G:A	rs6870356	G	A	A	Sox2_MA0143.3	-5	0	+	0	0	.
chr5	111134438	111134439	chr5:111134439:C:A	rs6594499	C	A	A	Sox2_MA0143.3	5	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr5	111198783	111198784	chr5:111198784:A:G	rs72793540	A	G	A	Sox2_MA0143.3	-20	0	+	0	0	.
chr5	111237072	111237073	chr5:111237073:C:G	rs55886158	C	G	G	Sox2_MA0143.3	-14	0	+	0	0	.
chr5	111308990	111308991	chr5:111308991:A:G	rs306083	A	G	G	Sox2_MA0143.3	25	0	+	0	0	.
chr5	111323573	111323574	chr5:111323574:A:G	rs1644509	A	G	G	Sox2_MA0143.3	17	0	-	0	0	.
chr5	111344174	111344175	chr5:111344175:G:A	rs387238	G	A	G	Sox2_MA0143.3	8	0	-	0	0	.
chr5	111383488	111383489	chr5:111383489:C:A	rs77636885	C	A	C	Sox2_MA0143.3	-12	0	-	0	0	.
chr5	111392330	111392331	chr5:111392331:C:G	rs410859	C	G	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr5	111463407	111463408	chr5:111463408:T:G	rs173681	T	G	G	Sox2_MA0143.3	20	0	-	0	0	.
chr5	111549183	111549184	chr5:111549184:A:G	rs80289873	A	G	A	Sox2_MA0143.3	-5	0	-	0	0	.
chr5	111549190	111549191	chr5:111549191:G:T	rs1052004674	G	T	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr5	111552010	111552011	chr5:111552011:A:G	rs116098880	A	G	A	Sox2_MA0143.3	16	0	+	0	0	.
chr5	111626906	111626907	chr5:111626907:G:A	rs10478059	G	A	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr5	111635165	111635166	chr5:111635166:G:A	rs1457720	G	A	C	Sox2_MA0143.3	5	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr5	111677997	111677998	chr5:111677998:G:T	rs10478063	G	T	G	Sox2_MA0143.3	22	0	+	0	0	.
chr5	111689755	111689756	chr5:111689756:T:C	rs185337	T	C	T	Sox2_MA0143.3	18	0	+	0	0	.
chr5	112003705	112003706	chr5:112003706:A:G	rs26561	A	G	A	Sox2_MA0143.3	27	0	+	0	0	.
chr5	112045898	112045899	chr5:112045899:C:A	rs7703360	C	A	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr5	112046355	112046356	chr5:112046356:A:C	rs255922	A	C	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr5	112175237	112175238	chr5:112175238:C:T	rs777238202	C	T	C	Sox2_MA0143.3	10	0	+	0	0	.
chr5	112312775	112312776	chr5:112312776:C:T	rs17134348	C	T	C	Sox2_MA0143.3	19	0	+	0	0	.
chr5	112316531	112316532	chr5:112316532:A:C	rs6860443	A	C	C	Sox2_MA0143.3	9	0	+	0	0	.
chr5	112318001	112318002	chr5:112318002:T:C	rs17134350	T	C	T	Sox2_MA0143.3	-17	0	-	0	0	.
chr5	112353396	112353397	chr5:112353397:C:T	rs4958043	C	T	C	Sox2_MA0143.3	20	0	-	0	0	.
chr5	112523222	112523223	chr5:112523223:G:A	rs10072877	G	A	G	Sox2_MA0143.3	24	0	+	0	0	.
chr5	112554373	112554374	chr5:112554374:C:T	rs113887121	C	T	C	Sox2_MA0143.3	9	0	+	0	0	.
chr5	112554374	112554375	chr5:112554375:G:A	rs13154524	G	A	G	Sox2_MA0143.3	10	0	+	0	0	.
chr5	112577503	112577504	chr5:112577504:C:G	rs59632691	C	G	G	Sox2_MA0143.3	10	0	-	0	0	.
chr5	112580073	112580074	chr5:112580074:T:A	rs72795803	T	A	T	Sox2_MA0143.3	2	1	+	9.800647049772198	9.613475778572903	CCTTTGTT
chr5	112593865	112593866	chr5:112593866:A:G	rs13356368	A	G	A	Sox2_MA0143.3	-4	0	-	0	0	.
chr5	112615118	112615119	chr5:112615119:A:C	rs114232741	A	C	A	Sox2_MA0143.3	20	0	+	0	0	.
chr5	112625939	112625940	chr5:112625940:C:T	rs191534292	C	T	C	Sox2_MA0143.3	9	0	+	0	0	.
chr5	112684180	112684181	chr5:112684181:C:T	rs10463641	C	T	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr5	112684181	112684182	chr5:112684182:C:A	rs10463642	C	A	C	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr5	112718849	112718850	chr5:112718850:A:T	rs9326862	A	T	A	Sox2_MA0143.3	-12	0	+	0	0	.
chr5	112801056	112801057	chr5:112801057:G:A	rs146698397	G	A	G	Sox2_MA0143.3	10	0	+	0	0	.
chr5	112831889	112831890	chr5:112831890:T:C	rs548710	T	C	T	Sox2_MA0143.3	4	1	+	8.864090315184848	1.9553355358696274	CCTTTGTG
chr5	112848340	112848341	chr5:112848341:G:A	rs114375615	G	A	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr5	113049306	113049307	chr5:113049307:C:G	rs7726296	C	G	G	Sox2_MA0143.3	5	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr5	113059435	113059436	chr5:113059436:T:G	rs139963735	T	G	T	Sox2_MA0143.3	-12	0	-	0	0	.
chr5	113061343	113061344	chr5:113061344:C:T	rs114253830	C	T	C	Sox2_MA0143.3	26	0	+	0	0	.
chr5	113066672	113066673	chr5:113066673:A:C	rs1367918176	A	C	A	Sox2_MA0143.3	21	0	-	0	0	.
chr5	113141566	113141567	chr5:113141567:C:T	rs558240639	C	T	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr5	113141596	113141597	chr5:113141597:C:T	rs7737030	C	T	T	Sox2_MA0143.3	21	0	+	0	0	.
chr5	113163251	113163252	chr5:113163252:G:T	rs11955699	G	T	G	Sox2_MA0143.3	22	0	-	0	0	.
chr5	113188216	113188217	chr5:113188217:A:G	rs6891544	A	G	A	Sox2_MA0143.3	2	1	+	9.019595766176417	2.900948058900136	CCATTGTC
chr5	113247043	113247044	chr5:113247044:C:A	rs7724936	C	A	C	Sox2_MA0143.3	0	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr5	113247332	113247333	chr5:113247333:T:C	rs56369622	T	C	t	Sox2_MA0143.3	23	0	-	0	0	.
chr5	113247333	113247334	chr5:113247334:A:G	rs56362568	A	G	G	Sox2_MA0143.3	22	0	-	0	0	.
chr5	113250986	113250987	chr5:113250987:C:T	rs6888602	C	T	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr5	113266864	113266865	chr5:113266865:G:T	rs17135519	G	T	T	Sox2_MA0143.3	11	0	-	0	0	.
chr5	113337059	113337060	chr5:113337060:T:C	rs115000675	T	C	T	Sox2_MA0143.3	10	0	+	0	0	.
chr5	113404455	113404456	chr5:113404456:G:A	rs13189910	G	A	G	Sox2_MA0143.3	17	0	-	0	0	.
chr5	113447131	113447132	chr5:113447132:C:A	rs11960559	C	A	c	Sox2_MA0143.3	0	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr5	113514828	113514829	chr5:113514829:A:G	rs1833681	A	G	A	Sox2_MA0143.3	14	0	-	0	0	.
chr5	113605824	113605825	chr5:113605825:G:A	rs10478133	G	A	G	Sox2_MA0143.3	21	0	+	0	0	.
chr5	113620278	113620279	chr5:113620279:T:A	rs61317390	T	A	T	Sox2_MA0143.3	-15	0	+	0	0	.
chr5	113660197	113660198	chr5:113660198:C:A	rs6594746	C	A	A	Sox2_MA0143.3	13	0	+	0	0	.
chr5	113671867	113671868	chr5:113671868:C:G	rs2195370	C	G	C	Sox2_MA0143.3	21	0	-	0	0	.
chr5	113675041	113675042	chr5:113675042:G:A	rs34045110	G	A	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr5	113808846	113808847	chr5:113808847:T:C	rs4705474	T	C	T	Sox2_MA0143.3	3	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr5	113951652	113951653	chr5:113951653:G:T	rs12518347	G	T	T	Sox2_MA0143.3	11	0	+	0	0	.
chr5	113990707	113990708	chr5:113990708:T:C	rs11241255	T	C	T	Sox2_MA0143.3	-18	0	+	0	0	.
chr5	114078078	114078079	chr5:114078079:T:C	rs10044188	T	C	T	Sox2_MA0143.3	-1	0	+	0	0	.
chr5	114148484	114148485	chr5:114148485:T:C	rs4705488	T	C	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr5	114243471	114243472	chr5:114243472:C:T	rs6887829	C	T	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr5	114243482	114243483	chr5:114243483:C:G	rs6887986	C	G	C	Sox2_MA0143.3	7	1	+	9.206767037375712	8.864090315184848	CCTTTGTC
chr5	114251239	114251240	chr5:114251240:C:T	rs4705651	C	T	T	Sox2_MA0143.3	10	0	+	0	0	.
chr5	114284118	114284119	chr5:114284119:A:G	rs1379562	A	G	A	Sox2_MA0143.3	4	1	-	3.5547341015215945	-3.3540206777936254	CCTTTGTA
chr5	114309577	114309578	chr5:114309578:G:C	rs17430200	G	C	G	Sox2_MA0143.3	21	0	-	0	0	.
chr5	114339159	114339160	chr5:114339160:A:G	rs257466	A	G	A	Sox2_MA0143.3	-17	0	-	0	0	.
chr5	114755793	114755794	chr5:114755794:A:G	chr5:114755794:A:G	A	G	A	Sox2_MA0143.3	14	0	-	0	0	.
chr5	114755796	114755797	chr5:114755797:A:C	chr5:114755797:A:C	A	C	A	Sox2_MA0143.3	11	0	-	0	0	.
chr5	114839503	114839504	chr5:114839504:T:A	rs79557253	T	A	T	Sox2_MA0143.3	13	0	-	0	0	.
chr5	115025001	115025002	chr5:115025002:T:A	rs4705699	T	A	A	Sox2_MA0143.3	-12	0	-	0	0	.
chr5	115039306	115039307	chr5:115039307:T:C	rs6870316	T	C	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr5	115179040	115179041	chr5:115179041:T:C	rs4705522	T	C	T	Sox2_MA0143.3	-1	0	+	0	0	.
chr5	115180592	115180593	chr5:115180593:G:T	rs2278697	G	T	G	Sox2_MA0143.3	11	0	-	0	0	.
chr5	115284247	115284248	chr5:115284248:G:A	rs2963771	G	A	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr5	115337781	115337782	chr5:115337782:T:C	rs1350106	T	C	T	Sox2_MA0143.3	-9	0	+	0	0	.
chr5	115376042	115376043	chr5:115376043:T:C	rs2964551	T	C	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr5	115424303	115424304	chr5:115424304:A:G	rs115578442	A	G	A	Sox2_MA0143.3	-10	0	-	0	0	.
chr5	115458106	115458107	chr5:115458107:C:T	rs1363548	C	T	C	Sox2_MA0143.3	20	0	+	0	0	.
chr5	115470766	115470767	chr5:115470767:T:C	rs257062	T	C	T	Sox2_MA0143.3	20	0	+	0	0	.
chr5	115488294	115488295	chr5:115488295:G:A	rs11955677	G	A	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr5	115594139	115594140	chr5:115594140:A:T	rs256945	A	T	T	Sox2_MA0143.3	-19	0	+	0	0	.
chr5	115661792	115661793	chr5:115661793:G:A	rs73782741	G	A	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr5	115818983	115818984	chr5:115818984:G:A	rs183600400	G	A	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr5	115884521	115884522	chr5:115884522:T:C	rs10751460	T	C	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr5	115939663	115939664	chr5:115939664:A:G	rs17480476	A	G	A	Sox2_MA0143.3	22	0	-	0	0	.
chr5	115939705	115939706	chr5:115939706:G:A	rs141569219	G	A	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr5	115978423	115978424	chr5:115978424:C:T	rs1445712	C	T	T	Sox2_MA0143.3	-7	0	+	0	0	.
chr5	116009841	116009842	chr5:116009842:C:T	rs10044527	C	T	C	Sox2_MA0143.3	23	0	-	0	0	.
chr5	116009877	116009878	chr5:116009878:A:G	rs78803278	A	G	A	Sox2_MA0143.3	-13	0	-	0	0	.
chr5	116058698	116058699	chr5:116058699:C:G	rs6880121	C	G	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr5	116136378	116136379	chr5:116136379:C:T	rs10079691	C	T	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr5	116136405	116136406	chr5:116136406:G:T	rs60104507	G	T	A	Sox2_MA0143.3	17	0	+	0	0	.
chr5	116361168	116361169	chr5:116361169:G:C	rs78035495	G	C	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr5	116429102	116429103	chr5:116429103:C:G	rs17139732	C	G	C	Sox2_MA0143.3	14	0	-	0	0	.
chr5	116508193	116508194	chr5:116508194:C:A	rs1037649868	C	A	C	Sox2_MA0143.3	-5	0	-	0	0	.
chr5	116533785	116533786	chr5:116533786:G:A	rs73780325	G	A	A	Sox2_MA0143.3	-6	0	-	0	0	.
chr5	116533789	116533790	chr5:116533790:C:A	rs73780326	C	A	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr5	116553621	116553622	chr5:116553622:G:A	rs139083229	G	A	G	Sox2_MA0143.3	12	0	-	0	0	.
chr5	116623236	116623237	chr5:116623237:A:G	rs674845	A	G	G	Sox2_MA0143.3	21	0	+	0	0	.
chr5	116625864	116625865	chr5:116625865:G:C	rs73259243	G	C	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr5	116724440	116724441	chr5:116724441:A:G	rs2964695	A	G	G	Sox2_MA0143.3	14	0	-	0	0	.
chr5	116724465	116724466	chr5:116724466:G:T	rs2933603	G	T	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr5	116729237	116729238	chr5:116729238:T:C	rs2909823	T	C	T	Sox2_MA0143.3	-6	0	-	0	0	.
chr5	116760001	116760002	chr5:116760002:A:C	rs115894745	A	C	A	Sox2_MA0143.3	20	0	-	0	0	.
chr5	116824961	116824962	chr5:116824962:C:T	rs115890772	C	T	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr5	116944475	116944476	chr5:116944476:G:C	rs17377649	G	C	G	Sox2_MA0143.3	8	0	+	0	0	.
chr5	116953385	116953386	chr5:116953386:C:A	rs112514438	C	A	C	Sox2_MA0143.3	20	0	-	0	0	.
chr5	117064973	117064974	chr5:117064974:G:T	rs767097563	G	T	G	Sox2_MA0143.3	20	0	-	0	0	.
chr5	117249624	117249625	chr5:117249625:G:A	rs541558562	G	A	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr5	117347588	117347589	chr5:117347589:A:G	rs4629633	A	G	G	Sox2_MA0143.3	14	0	-	0	0	.
chr5	117411608	117411609	chr5:117411609:G:A	rs1560076	G	A	G	Sox2_MA0143.3	11	0	+	0	0	.
chr5	117425344	117425345	chr5:117425345:G:A	rs2560540	G	A	A	Sox2_MA0143.3	26	0	+	0	0	.
chr5	117623174	117623175	chr5:117623175:A:G	rs17344021	A	G	A	Sox2_MA0143.3	27	0	-	0	0	.
chr5	117639488	117639489	chr5:117639489:T:G	rs447179	T	G	T	Sox2_MA0143.3	-5	0	-	0	0	.
chr5	117680569	117680570	chr5:117680570:A:C	rs1526880	A	C	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr5	117882051	117882052	chr5:117882052:A:G	rs6885421	A	G	G	Sox2_MA0143.3	20	0	+	0	0	.
chr5	117891632	117891633	chr5:117891633:T:C	rs72784765	T	C	T	Sox2_MA0143.3	-12	0	+	0	0	.
chr5	118095396	118095397	chr5:118095397:G:C	rs569531751	G	C	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr5	118095398	118095399	chr5:118095399:T:C	rs11742593	T	C	T	Sox2_MA0143.3	-14	0	+	0	0	.
chr5	118509519	118509520	chr5:118509520:T:G	rs7715481	T	G	G	Sox2_MA0143.3	6	1	+	8.676919043985553	1.7681642646703326	CCATTGTG
chr5	118531495	118531496	chr5:118531496:C:T	rs6595142	C	T	T	Sox2_MA0143.3	17	0	+	0	0	.
chr5	118551827	118551828	chr5:118551828:T:C	rs6885715	T	C	T	Sox2_MA0143.3	-13	0	-	0	0	.
chr5	118578608	118578609	chr5:118578609:A:C	rs73234345	A	C	A	Sox2_MA0143.3	7	1	-	9.800647049772198	8.864090315184848	CCTTTGTT
chr5	118611634	118611635	chr5:118611635:T:C	rs75038652	T	C	T	Sox2_MA0143.3	-8	0	+	0	0	.
chr5	118611657	118611658	chr5:118611658:T:C	rs1864334	T	C	T	Sox2_MA0143.3	15	0	+	0	0	.
chr5	118680198	118680199	chr5:118680199:C:A	rs6892090	C	A	C	Sox2_MA0143.3	9	0	+	0	0	.
chr5	118746257	118746258	chr5:118746258:T:C	rs76441119	T	C	T	Sox2_MA0143.3	14	0	+	0	0	.
chr5	118793205	118793206	chr5:118793206:G:C	rs145042459	G	C	G	Sox2_MA0143.3	1	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr5	118988944	118988945	chr5:118988945:A:G	rs181248389	A	G	A	Sox2_MA0143.3	25	0	-	0	0	.
chr5	119088601	119088602	chr5:119088602:T:G	rs72784072	T	G	T	Sox2_MA0143.3	19	0	+	0	0	.
chr5	119164169	119164170	chr5:119164170:A:T	rs115706365	A	T	A	Sox2_MA0143.3	-9	0	-	0	0	.
chr5	119270163	119270164	chr5:119270164:A:G	rs10900729	A	G	A	Sox2_MA0143.3	9	0	+	0	0	.
chr5	119324873	119324874	chr5:119324874:T:C	rs11959729	T	C	T	Sox2_MA0143.3	-15	0	+	0	0	.
chr5	119339623	119339624	chr5:119339624:C:T	rs3813302	C	T	C	Sox2_MA0143.3	12	0	-	0	0	.
chr5	120122901	120122902	chr5:120122902:A:G	rs182767283	A	G	A	Sox2_MA0143.3	14	0	-	0	0	.
chr5	120145383	120145384	chr5:120145384:C:T	rs112286497	C	T	C	Sox2_MA0143.3	27	0	+	0	0	.
chr5	120194925	120194926	chr5:120194926:G:C	rs6878229	G	C	-	Sox2_MA0143.3	26	0	-	0	0	.
chr5	120396166	120396167	chr5:120396167:T:C	rs1368190	T	C	T	Sox2_MA0143.3	-18	0	+	0	0	.
chr5	120631765	120631766	chr5:120631766:C:T	rs148976279	C	T	C	Sox2_MA0143.3	11	0	-	0	0	.
chr5	120891798	120891799	chr5:120891799:C:T	rs78754165	C	T	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr5	121053106	121053107	chr5:121053107:A:G	rs75931094	A	G	A	Sox2_MA0143.3	-18	0	+	0	0	.
chr5	121053109	121053110	chr5:121053110:T:C	rs4458605	T	C	T	Sox2_MA0143.3	-15	0	+	0	0	.
chr5	121060716	121060717	chr5:121060717:C:T	rs10519660	C	T	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr5	121223411	121223412	chr5:121223412:G:A	rs115747118	G	A	G	Sox2_MA0143.3	12	0	-	0	0	.
chr5	121424912	121424913	chr5:121424913:C:T	rs10054289	C	T	T	Sox2_MA0143.3	0	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr5	121629737	121629738	chr5:121629738:A:G	rs34714933	A	G	A	Sox2_MA0143.3	-12	0	+	0	0	.
chr5	122036028	122036029	chr5:122036029:G:A	rs183129868	G	A	G	Sox2_MA0143.3	27	0	+	0	0	.
chr5	122229152	122229153	chr5:122229153:G:T	rs59233023	G	T	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr5	122415667	122415668	chr5:122415668:G:C	rs304393	G	C	G	Sox2_MA0143.3	11	0	+	0	0	.
chr5	122429855	122429856	chr5:122429856:A:T	rs3811894	A	T	A	Sox2_MA0143.3	22	0	-	0	0	.
chr5	122485441	122485442	chr5:122485442:C:G	rs2407207	C	G	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr5	122493861	122493862	chr5:122493862:G:C	rs1221032593	G	C	G	Sox2_MA0143.3	23	0	-	0	0	.
chr5	122704955	122704956	chr5:122704956:T:A	rs12659402	T	A	T	Sox2_MA0143.3	15	0	-	0	0	.
chr5	122774897	122774898	chr5:122774898:G:A	rs10069676	G	A	g	Sox2_MA0143.3	14	0	-	0	0	.
chr5	122774910	122774911	chr5:122774911:G:A	rs767790884	G	A	G	Sox2_MA0143.3	1	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr5	122864850	122864851	chr5:122864851:A:G	rs756686032	A	G	A	Sox2_MA0143.3	6	1	-	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr5	122982023	122982024	chr5:122982024:G:A	rs36099390	G	A	A	Sox2_MA0143.3	-16	0	+	0	0	.
chr5	122994033	122994034	chr5:122994034:A:G	rs34126945	A	G	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr5	123007290	123007291	chr5:123007291:A:T	rs114623494	A	T	A	Sox2_MA0143.3	-14	0	-	0	0	.
chr5	123117018	123117019	chr5:123117019:A:G	rs443796	A	G	A	Sox2_MA0143.3	18	0	+	0	0	.
chr5	123153860	123153861	chr5:123153861:C:T	rs56266463	C	T	G	Sox2_MA0143.3	11	0	-	0	0	.
chr5	123153861	123153862	chr5:123153862:A:G	rs479546	A	G	A	Sox2_MA0143.3	10	0	-	0	0	.
chr5	123207026	123207027	chr5:123207027:G:A	rs338793	G	A	A	Sox2_MA0143.3	-11	0	-	0	0	.
chr5	123244040	123244041	chr5:123244041:C:G	rs10074520	C	G	C	Sox2_MA0143.3	21	0	+	0	0	.
chr5	123266049	123266050	chr5:123266050:G:A	rs35828	G	A	G	Sox2_MA0143.3	16	0	-	0	0	.
chr5	123385393	123385394	chr5:123385394:C:T	rs7713124	C	T	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr5	123450303	123450304	chr5:123450304:C:T	rs77712503	C	T	C	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr5	123455290	123455291	chr5:123455291:C:A	rs76826906	C	A	A	Sox2_MA0143.3	-4	0	-	0	0	.
chr5	123582719	123582720	chr5:123582720:A:T	rs17150494	A	T	A	Sox2_MA0143.3	20	0	+	0	0	.
chr5	123875353	123875354	chr5:123875354:T:C	chr5:123875354:T:C	T	C	T	Sox2_MA0143.3	23	0	+	0	0	.
chr5	123916403	123916404	chr5:123916404:T:C	rs72802038	T	C	T	Sox2_MA0143.3	-7	0	-	0	0	.
chr5	124010079	124010080	chr5:124010080:T:C	rs11949120	T	C	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr5	124102707	124102708	chr5:124102708:C:G	rs72785903	C	G	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr5	124339923	124339924	chr5:124339924:C:T	rs161010	C	T	C	Sox2_MA0143.3	22	0	-	0	0	.
chr5	124341041	124341042	chr5:124341042:A:G	rs167645	A	G	G	Sox2_MA0143.3	14	0	+	0	0	.
chr5	124403392	124403393	chr5:124403393:A:G	rs257703	A	G	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr5	124457002	124457003	chr5:124457003:T:A	rs13187836	T	A	T	Sox2_MA0143.3	-6	0	-	0	0	.
chr5	124515666	124515667	chr5:124515667:A:T	rs11949368	A	T	A	Sox2_MA0143.3	10	0	-	0	0	.
chr5	124525057	124525058	chr5:124525058:G:A	rs56114960	G	A	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr5	124536396	124536397	chr5:124536397:T:C	rs28492978	T	C	T	Sox2_MA0143.3	6	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr5	124580799	124580800	chr5:124580800:G:A	rs12653801	G	A	A	Sox2_MA0143.3	25	0	-	0	0	.
chr5	124584237	124584238	chr5:124584238:C:T	rs11743981	C	T	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr5	124646019	124646020	chr5:124646020:G:C	rs7730012	G	C	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr5	124649904	124649905	chr5:124649905:C:T	rs148455338	C	T	C	Sox2_MA0143.3	20	0	-	0	0	.
chr5	124652179	124652180	chr5:124652180:A:G	rs926004068	A	G	A	Sox2_MA0143.3	-17	0	-	0	0	.
chr5	124658328	124658329	chr5:124658329:C:A	rs116072995	C	A	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr5	124661111	124661112	chr5:124661112:T:C	rs76843142	T	C	T	Sox2_MA0143.3	4	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr5	124661614	124661615	chr5:124661615:C:T	rs11746047	C	T	C	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr5	124740389	124740390	chr5:124740390:C:T	rs10056527	C	T	C	Sox2_MA0143.3	23	0	-	0	0	.
chr5	124740401	124740402	chr5:124740402:C:T	rs73298976	C	T	C	Sox2_MA0143.3	11	0	-	0	0	.
chr5	124761188	124761189	chr5:124761189:C:T	rs59479102	C	T	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr5	124761198	124761199	chr5:124761199:T:C	rs574954713	T	C	T	Sox2_MA0143.3	-18	0	-	0	0	.
chr5	124823260	124823261	chr5:124823261:G:A	rs10042671	G	A	G	Sox2_MA0143.3	15	0	-	0	0	.
chr5	124878433	124878434	chr5:124878434:G:A	rs140330559	G	A	G	Sox2_MA0143.3	19	0	-	0	0	.
chr5	124894672	124894673	chr5:124894673:C:G	rs369974441	C	G	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr5	124894690	124894691	chr5:124894691:T:C	rs59020249	T	C	C	Sox2_MA0143.3	8	0	+	0	0	.
chr5	124922433	124922434	chr5:124922434:T:G	rs200446802	T	G	t	Sox2_MA0143.3	27	0	+	0	0	.
chr5	125153208	125153209	chr5:125153209:C:T	rs11741331	C	T	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr5	125154341	125154342	chr5:125154342:C:A	rs75356424	C	A	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr5	125200983	125200984	chr5:125200984:T:G	rs75846784	T	G	T	Sox2_MA0143.3	17	0	-	0	0	.
chr5	125274930	125274931	chr5:125274931:C:G	rs62373309	C	G	C	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr5	125278960	125278961	chr5:125278961:A:G	rs17152577	A	G	A	Sox2_MA0143.3	-18	0	+	0	0	.
chr5	125349517	125349518	chr5:125349518:C:T	rs142757853	C	T	C	Sox2_MA0143.3	11	0	-	0	0	.
chr5	125376982	125376983	chr5:125376983:G:C	rs6894370	G	C	C	Sox2_MA0143.3	5	1	+	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr5	125410124	125410125	chr5:125410125:C:G	rs1034358733	C	G	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr5	125413280	125413281	chr5:125413281:T:G	rs74627365	T	G	T	Sox2_MA0143.3	-20	0	+	0	0	.
chr5	125454893	125454894	chr5:125454894:A:T	chr5:125454894:A:T	A	T	A	Sox2_MA0143.3	25	0	+	0	0	.
chr5	125602437	125602438	chr5:125602438:T:A	rs330355	T	A	T	Sox2_MA0143.3	-6	0	-	0	0	.
chr5	125686043	125686044	chr5:125686044:C:T	rs7710113	C	T	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr5	125877535	125877536	chr5:125877536:T:C	rs167865	T	C	T	Sox2_MA0143.3	27	0	-	0	0	.
chr5	125966485	125966486	chr5:125966486:A:G	rs59002887	A	G	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr5	126000698	126000699	chr5:126000699:G:T	rs454949	G	T	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr5	126013231	126013232	chr5:126013232:G:A	rs7447513	G	A	G	Sox2_MA0143.3	10	0	+	0	0	.
chr5	126103997	126103998	chr5:126103998:A:G	rs10478683	A	G	G	Sox2_MA0143.3	6	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr5	126124731	126124732	chr5:126124732:T:A	rs141826531	T	A	T	Sox2_MA0143.3	26	0	-	0	0	.
chr5	126189517	126189518	chr5:126189518:C:A	rs2162702	C	A	A	Sox2_MA0143.3	9	0	+	0	0	.
chr5	126189521	126189522	chr5:126189522:G:A	rs2162701	G	A	G	Sox2_MA0143.3	13	0	+	0	0	.
chr5	126270240	126270241	chr5:126270241:A:C	rs10078124	A	C	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr5	126312855	126312856	chr5:126312856:G:C	rs882217	G	C	G	Sox2_MA0143.3	25	0	-	0	0	.
chr5	126315600	126315601	chr5:126315601:T:C	rs17154366	T	C	C	Sox2_MA0143.3	6	1	+	9.206767037375712	2.298012258060492	CCTTTGTC
chr5	126326799	126326800	chr5:126326800:G:A	rs62391831	G	A	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr5	126422987	126422988	chr5:126422988:T:C	rs112566060	T	C	T	Sox2_MA0143.3	10	0	+	0	0	.
chr5	126453515	126453516	chr5:126453516:A:G	rs11241893	A	G	G	Sox2_MA0143.3	6	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr5	126519729	126519730	chr5:126519730:T:C	rs34340962	T	C	C	Sox2_MA0143.3	23	0	+	0	0	.
chr5	126537716	126537717	chr5:126537717:C:T	rs11750167	C	T	C	Sox2_MA0143.3	0	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr5	126599398	126599399	chr5:126599399:G:C	rs76939631	G	C	G	Sox2_MA0143.3	23	0	-	0	0	.
chr5	126665278	126665279	chr5:126665279:G:T	rs62392513	G	T	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr5	126703342	126703343	chr5:126703343:C:T	rs56256633	C	T	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr5	126715188	126715189	chr5:126715189:C:G	rs13154662	C	G	c	Sox2_MA0143.3	-10	0	-	0	0	.
chr5	126998199	126998200	chr5:126998200:A:C	rs61653213	A	C	A	Sox2_MA0143.3	10	0	-	0	0	.
chr5	127083141	127083142	chr5:127083142:G:T	rs78579871	G	T	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr5	127172693	127172694	chr5:127172694:G:A	rs2429534	G	A	A	Sox2_MA0143.3	11	0	-	0	0	.
chr5	127280668	127280669	chr5:127280669:C:A	rs367647246	C	A	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr5	127298751	127298752	chr5:127298752:C:G	rs2194080	C	G	C	Sox2_MA0143.3	18	0	-	0	0	.
chr5	127398672	127398673	chr5:127398673:C:T	rs6595769	C	T	C	Sox2_MA0143.3	22	0	+	0	0	.
chr5	127486599	127486600	chr5:127486600:C:T	rs17164896	C	T	C	Sox2_MA0143.3	16	0	-	0	0	.
chr5	127529639	127529640	chr5:127529640:C:G	rs233032	C	G	C	Sox2_MA0143.3	1	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr5	127562405	127562406	chr5:127562406:T:A	rs187178205	T	A	T	Sox2_MA0143.3	24	0	+	0	0	.
chr5	127786619	127786620	chr5:127786620:G:A	rs10463833	G	A	A	Sox2_MA0143.3	26	0	+	0	0	.
chr5	127978753	127978754	chr5:127978754:T:C	rs10463835	T	C	T	Sox2_MA0143.3	25	0	-	0	0	.
chr5	128271134	128271135	chr5:128271135:A:G	rs28663336	A	G	A	Sox2_MA0143.3	-6	0	-	0	0	.
chr5	128312807	128312808	chr5:128312808:A:G	rs10044959	A	G	A	Sox2_MA0143.3	4	1	-	9.800647049772198	2.8918922704569785	CCTTTGTT
chr5	128479243	128479244	chr5:128479244:T:C	rs1004965	T	C	T	Sox2_MA0143.3	19	0	+	0	0	.
chr5	128494171	128494172	chr5:128494172:A:G	rs62391643	A	G	A	Sox2_MA0143.3	2	1	+	9.019595766176417	2.900948058900136	CCATTGTC
chr5	128539501	128539502	chr5:128539502:C:T	rs56072924	C	T	C	Sox2_MA0143.3	13	0	+	0	0	.
chr5	128568105	128568106	chr5:128568106:G:T	rs183907383	G	T	G	Sox2_MA0143.3	27	0	+	0	0	.
chr5	128587403	128587404	chr5:128587404:A:G	rs62390726	A	G	A	Sox2_MA0143.3	8	0	-	0	0	.
chr5	128749715	128749716	chr5:128749716:C:T	rs247206	C	T	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr5	128871024	128871025	chr5:128871025:A:G	rs13356389	A	G	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr5	128934787	128934788	chr5:128934788:C:G	rs2577509	C	G	C	Sox2_MA0143.3	20	0	-	0	0	.
chr5	129003372	129003373	chr5:129003373:T:A	rs187087285	T	A	t	Sox2_MA0143.3	-13	0	-	0	0	.
chr5	129114177	129114178	chr5:129114178:G:A	rs7706884	G	A	G	Sox2_MA0143.3	9	0	+	0	0	.
chr5	129141597	129141598	chr5:129141598:G:C	rs12514845	G	C	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr5	129250142	129250143	chr5:129250143:C:A	rs6595892	C	A	A	Sox2_MA0143.3	-2	0	-	0	0	.
chr5	129250151	129250152	chr5:129250152:C:T	rs6595893	C	T	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr5	129346168	129346169	chr5:129346169:C:T	rs35435500	C	T	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr5	129410821	129410822	chr5:129410822:C:A	rs10520034	C	A	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr5	129458643	129458644	chr5:129458644:G:C	rs3853128	G	C	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr5	129472550	129472551	chr5:129472551:A:G	rs115059948	A	G	A	Sox2_MA0143.3	23	0	-	0	0	.
chr5	129718154	129718155	chr5:129718155:G:A	rs72792845	G	A	G	Sox2_MA0143.3	8	0	+	0	0	.
chr5	129760841	129760842	chr5:129760842:G:A	rs1363473	G	A	A	Sox2_MA0143.3	21	0	-	0	0	.
chr5	129931013	129931014	chr5:129931014:A:G	rs1022402940	A	G	A	Sox2_MA0143.3	27	0	+	0	0	.
chr5	130113631	130113632	chr5:130113632:A:G	rs1860065	A	G	A	Sox2_MA0143.3	9	0	+	0	0	.
chr5	130139079	130139080	chr5:130139080:A:G	rs740480	A	G	A	Sox2_MA0143.3	9	0	-	0	0	.
chr5	130278415	130278416	chr5:130278416:C:T	rs3919478	C	T	C	Sox2_MA0143.3	24	0	-	0	0	.
chr5	130333893	130333894	chr5:130333894:C:T	rs1473132	C	T	T	Sox2_MA0143.3	20	0	+	0	0	.
chr5	131042376	131042377	chr5:131042377:G:A	rs1363696	G	A	G	Sox2_MA0143.3	14	0	-	0	0	.
chr5	131264134	131264135	chr5:131264135:G:T	rs1473155614	G	T	G	Sox2_MA0143.3	26	0	-	0	0	.
chr5	131277906	131277907	chr5:131277907:T:C	rs11743851	T	C	T	Sox2_MA0143.3	23	0	+	0	0	.
chr5	131381856	131381857	chr5:131381857:A:G	rs17167458	A	G	A	Sox2_MA0143.3	22	0	+	0	0	.
chr5	131538433	131538434	chr5:131538434:A:G	rs6898777	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr5	131676304	131676305	chr5:131676305:A:G	rs26009	A	G	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr5	131749769	131749770	chr5:131749770:T:C	rs867114603	T	C	T	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr5	131981028	131981029	chr5:131981029:G:A	rs10477740	G	A	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr5	131985036	131985037	chr5:131985037:A:G	rs253943	A	G	A	Sox2_MA0143.3	16	0	-	0	0	.
chr5	132065836	132065837	chr5:132065837:A:G	rs11575020	A	G	A	Sox2_MA0143.3	-19	0	-	0	0	.
chr5	132103642	132103643	chr5:132103643:A:T	rs45512	A	T	T	Sox2_MA0143.3	21	0	-	0	0	.
chr5	132235629	132235630	chr5:132235630:T:C	rs10036208	T	C	C	Sox2_MA0143.3	2	1	-	9.613475778572903	3.494828071296623	CCATTGTT
chr5	132270355	132270356	chr5:132270356:C:G	rs35566767	C	G	C	Sox2_MA0143.3	10	0	-	0	0	.
chr5	132279412	132279413	chr5:132279413:T:G	rs116776081	T	G	T	Sox2_MA0143.3	-7	0	-	0	0	.
chr5	132342718	132342719	chr5:132342719:G:A	rs4705933	G	A	G	Sox2_MA0143.3	14	0	-	0	0	.
chr5	132374334	132374335	chr5:132374335:C:T	rs34590412	C	T	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr5	132374509	132374510	chr5:132374510:G:A	rs581968	G	A	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr5	132393425	132393426	chr5:132393426:A:C	rs274549	A	C	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr5	132451360	132451361	chr5:132451361:A:G	rs6866467	A	G	g	Sox2_MA0143.3	11	0	-	0	0	.
chr5	132557286	132557287	chr5:132557287:G:A	rs4526098	G	A	G	Sox2_MA0143.3	9	0	+	0	0	.
chr5	132762015	132762016	chr5:132762016:A:T	chr5:132762016:A:T	A	T	A	Sox2_MA0143.3	-11	0	-	0	0	.
chr5	132777997	132777998	chr5:132777998:T:C	rs913679720	T	C	T	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr5	132813340	132813341	chr5:132813341:G:T	rs554904606	G	T	G	Sox2_MA0143.3	22	0	-	0	0	.
chr5	132831563	132831564	chr5:132831564:G:C	rs67457690	G	C	C	Sox2_MA0143.3	23	0	+	0	0	.
chr5	132866561	132866562	chr5:132866562:T:C	rs114932352	T	C	T	Sox2_MA0143.3	-11	0	-	0	0	.
chr5	132866568	132866569	chr5:132866569:A:G	rs60321536	A	G	A	Sox2_MA0143.3	-18	0	-	0	0	.
chr5	132866569	132866570	chr5:132866570:G:A	rs192032018	G	A	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr5	132983352	132983353	chr5:132983353:C:T	rs369288315	C	T	C	Sox2_MA0143.3	-20	0	-	0	0	.
chr5	133121790	133121791	chr5:133121791:A:G	rs10050413	A	G	A	Sox2_MA0143.3	6	1	-	8.676919043985553	1.7681642646703326	CCATTGTG
chr5	133148727	133148728	chr5:133148728:A:G	rs4958126	A	G	A	Sox2_MA0143.3	2	1	+	8.676919043985553	2.5582713367092715	CCATTGTG
chr5	133223273	133223274	chr5:133223274:A:G	rs73273881	A	G	A	Sox2_MA0143.3	18	0	+	0	0	.
chr5	133339583	133339584	chr5:133339584:A:C	rs11960384	A	C	a	Sox2_MA0143.3	19	0	-	0	0	.
chr5	133365918	133365919	chr5:133365919:T:C	rs73265668	T	C	T	Sox2_MA0143.3	15	0	-	0	0	.
chr5	133513640	133513641	chr5:133513641:G:A	rs823759	G	A	A	Sox2_MA0143.3	1	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr5	133529046	133529047	chr5:133529047:C:T	rs823980	C	T	T	Sox2_MA0143.3	-20	0	+	0	0	.
chr5	133529092	133529093	chr5:133529093:G:A	rs823981	G	A	A	Sox2_MA0143.3	26	0	+	0	0	.
chr5	133658625	133658626	chr5:133658626:A:G	rs28706899	A	G	A	Sox2_MA0143.3	26	0	+	0	0	.
chr5	133667443	133667444	chr5:133667444:T:C	rs11242168	T	C	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr5	133671605	133671606	chr5:133671606:G:A	rs12653302	G	A	G	Sox2_MA0143.3	0	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr5	133704581	133704582	chr5:133704582:A:G	rs13436855	A	G	A	Sox2_MA0143.3	25	0	+	0	0	.
chr5	133713934	133713935	chr5:133713935:C:T	rs10900821	C	T	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr5	133753665	133753666	chr5:133753666:G:T	rs17167004	G	T	G	Sox2_MA0143.3	5	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr5	133802471	133802472	chr5:133802472:C:G	rs1045369591	C	G	C	Sox2_MA0143.3	0	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr5	133809912	133809913	chr5:133809913:G:T	rs62375884	G	T	G	Sox2_MA0143.3	26	0	-	0	0	.
chr5	133818232	133818233	chr5:133818233:G:A	rs936684450	G	A	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr5	133890400	133890401	chr5:133890401:C:G	rs903076	C	G	G	Sox2_MA0143.3	25	0	-	0	0	.
chr5	133906853	133906854	chr5:133906854:G:A	rs10065367	G	A	G	Sox2_MA0143.3	1	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr5	133931667	133931668	chr5:133931668:G:A	rs10479059	G	A	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr5	133939117	133939118	chr5:133939118:C:T	rs75239125	C	T	G	Sox2_MA0143.3	13	0	-	0	0	.
chr5	133955630	133955631	chr5:133955631:T:C	rs10123	T	C	T	Sox2_MA0143.3	15	0	+	0	0	.
chr5	134001024	134001025	chr5:134001025:C:T	rs17694462	C	T	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr5	134041991	134041992	chr5:134041992:C:A	rs190626265	C	A	C	Sox2_MA0143.3	21	0	+	0	0	.
chr5	134053986	134053987	chr5:134053987:A:G	rs2546347	A	G	G	Sox2_MA0143.3	12	0	+	0	0	.
chr5	134053989	134053990	chr5:134053990:C:T	rs2546348	C	T	T	Sox2_MA0143.3	15	0	+	0	0	.
chr5	134092771	134092772	chr5:134092772:G:C	rs244679	G	C	C	Sox2_MA0143.3	22	0	-	0	0	.
chr5	134101654	134101655	chr5:134101655:G:C	rs30503	G	C	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr5	134103582	134103583	chr5:134103583:G:A	rs62379371	G	A	G	Sox2_MA0143.3	10	0	-	0	0	.
chr5	134142259	134142260	chr5:134142260:G:A	rs34995273	G	A	G	Sox2_MA0143.3	7	1	+	8.676919043985553	3.3675628303222993	CCATTGTG
chr5	134465780	134465781	chr5:134465781:A:G	rs12523024	A	G	A	Sox2_MA0143.3	-12	0	+	0	0	.
chr5	134509688	134509689	chr5:134509689:A:G	rs4958244	A	G	G	Sox2_MA0143.3	26	0	-	0	0	.
chr5	134533712	134533713	chr5:134533713:A:C	chr5:134533713:A:C	A	C	A	Sox2_MA0143.3	-6	0	+	0	0	.
chr5	134534244	134534245	chr5:134534245:A:C	rs11949657	A	C	A	Sox2_MA0143.3	6	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr5	134591455	134591456	chr5:134591456:T:G	chr5:134591456:T:G	T	G	T	Sox2_MA0143.3	17	0	+	0	0	.
chr5	135069470	135069471	chr5:135069471:G:A	rs13436118	G	A	G	Sox2_MA0143.3	24	0	+	0	0	.
chr5	135069524	135069525	chr5:135069525:T:C	rs540710019	T	C	T	Sox2_MA0143.3	4	1	+	9.206767037375712	2.2980122580604916	CCTTTGTC
chr5	135069791	135069792	chr5:135069792:T:C	rs6881034	T	C	C	Sox2_MA0143.3	21	0	+	0	0	.
chr5	135073749	135073750	chr5:135073750:A:G	rs1345800048	A	G	A	Sox2_MA0143.3	-15	0	-	0	0	.
chr5	135077111	135077112	chr5:135077112:G:A	rs6859913	G	A	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr5	135077126	135077127	chr5:135077127:T:C	rs6881151	T	C	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr5	135088936	135088937	chr5:135088937:G:A	rs114590188	G	A	G	Sox2_MA0143.3	5	1	+	8.676919043985553	1.7681642646703324	CCATTGTG
chr5	135094893	135094894	chr5:135094894:T:C	rs1553531	T	C	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr5	135150276	135150277	chr5:135150277:G:A	rs181983145	G	A	G	Sox2_MA0143.3	15	0	+	0	0	.
chr5	135154114	135154115	chr5:135154115:G:A	rs114943301	G	A	A	Sox2_MA0143.3	24	0	+	0	0	.
chr5	135183654	135183655	chr5:135183655:G:A	rs4246778	G	A	A	Sox2_MA0143.3	-2	0	-	0	0	.
chr5	135185867	135185868	chr5:135185868:T:A	rs576389610	T	A	T	Sox2_MA0143.3	23	0	-	0	0	.
chr5	135192418	135192419	chr5:135192419:C:T	rs761926317	C	T	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr5	135204308	135204309	chr5:135204309:T:G	rs1450891066	T	G	T	Sox2_MA0143.3	25	0	+	0	0	.
chr5	135234393	135234394	chr5:135234394:C:T	rs17165431	C	T	C	Sox2_MA0143.3	10	0	-	0	0	.
chr5	135253858	135253859	chr5:135253859:C:T	rs189174821	C	T	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr5	135253885	135253886	chr5:135253886:C:T	rs73290832	C	T	C	Sox2_MA0143.3	19	0	+	0	0	.
chr5	135307646	135307647	chr5:135307647:T:G	rs150667501	T	G	T	Sox2_MA0143.3	4	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr5	135423135	135423136	chr5:135423136:T:C	rs7705463	T	C	T	Sox2_MA0143.3	19	0	+	0	0	.
chr5	135465290	135465291	chr5:135465291:C:T	rs185481455	C	T	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr5	135480127	135480128	chr5:135480128:A:C	rs11242252	A	C	A	Sox2_MA0143.3	10	0	+	0	0	.
chr5	135534949	135534950	chr5:135534950:G:A	rs11960442	G	A	G	Sox2_MA0143.3	24	0	-	0	0	.
chr5	135658264	135658265	chr5:135658265:A:C	rs801549	A	C	A	Sox2_MA0143.3	9	0	-	0	0	.
chr5	135705960	135705961	chr5:135705961:C:T	rs6881599	C	T	T	Sox2_MA0143.3	-7	0	+	0	0	.
chr5	135813842	135813843	chr5:135813843:G:A	rs114155614	G	A	g	Sox2_MA0143.3	14	0	-	0	0	.
chr5	135830601	135830602	chr5:135830602:G:A	rs59267769	G	A	G	Sox2_MA0143.3	13	0	-	0	0	.
chr5	135833779	135833780	chr5:135833780:G:A	rs11242301	G	A	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr5	135865590	135865591	chr5:135865591:C:T	rs4613701	C	T	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr5	135877515	135877516	chr5:135877516:G:T	rs25898	G	T	T	Sox2_MA0143.3	5	1	+	9.206767037375712	2.298012258060492	CCTTTGTC
chr5	135890323	135890324	chr5:135890324:G:A	rs117876787	G	A	G	Sox2_MA0143.3	0	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr5	135942413	135942414	chr5:135942414:T:C	rs31545	T	C	C	Sox2_MA0143.3	6	1	+	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr5	135988560	135988561	chr5:135988561:T:G	rs40276	T	G	T	Sox2_MA0143.3	-16	0	+	0	0	.
chr5	135993664	135993665	chr5:135993665:A:G	rs30741	A	G	A	Sox2_MA0143.3	-8	0	+	0	0	.
chr5	136016480	136016481	chr5:136016481:G:C	rs72794908	G	C	G	Sox2_MA0143.3	27	0	-	0	0	.
chr5	136039783	136039784	chr5:136039784:A:G	rs4141306	A	G	A	Sox2_MA0143.3	15	0	+	0	0	.
chr5	136062589	136062590	chr5:136062590:G:A	rs3749782	G	A	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr5	136068075	136068076	chr5:136068076:T:G	rs6880582	T	G	T	Sox2_MA0143.3	-5	0	+	0	0	.
chr5	136078590	136078591	chr5:136078591:G:A	rs2190622	G	A	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr5	136134492	136134493	chr5:136134493:T:C	rs7728349	T	C	C	Sox2_MA0143.3	26	0	+	0	0	.
chr5	136206455	136206456	chr5:136206456:A:C	rs7717157	A	C	C	Sox2_MA0143.3	4	1	-	8.864090315184848	1.9553355358696274	CCTTTGTG
chr5	136249733	136249734	chr5:136249734:G:A	rs150383503	G	A	G	Sox2_MA0143.3	8	0	-	0	0	.
chr5	136249753	136249754	chr5:136249754:T:G	rs115184714	T	G	T	Sox2_MA0143.3	-12	0	-	0	0	.
chr5	136424509	136424510	chr5:136424510:T:C	rs76731208	T	C	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr5	136430328	136430329	chr5:136430329:C:G	rs346661	C	G	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr5	136844387	136844388	chr5:136844388:C:T	rs9327764	C	T	C	Sox2_MA0143.3	20	0	-	0	0	.
chr5	136905413	136905414	chr5:136905414:G:T	rs2881671	G	T	T	Sox2_MA0143.3	-3	0	+	0	0	.
chr5	137016904	137016905	chr5:137016905:C:G	rs559715652	C	G	C	Sox2_MA0143.3	11	0	-	0	0	.
chr5	137035821	137035822	chr5:137035822:C:T	rs17521509	C	T	C	Sox2_MA0143.3	5	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr5	137040050	137040051	chr5:137040051:G:A	rs17703118	G	A	G	Sox2_MA0143.3	-14	0	+	0	0	.
chr5	137080421	137080422	chr5:137080422:T:C	rs17646790	T	C	T	Sox2_MA0143.3	-18	0	-	0	0	.
chr5	137096786	137096787	chr5:137096787:C:T	rs530438574	C	T	C	Sox2_MA0143.3	0	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr5	137122769	137122770	chr5:137122770:T:C	rs2905970	T	C	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr5	137133606	137133607	chr5:137133607:G:T	rs10050568	G	T	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr5	137155793	137155794	chr5:137155794:T:C	rs4976341	T	C	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr5	137218987	137218988	chr5:137218988:C:T	rs17778861	C	T	T	Sox2_MA0143.3	1	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr5	137328641	137328642	chr5:137328642:T:C	rs9327784	T	C	C	Sox2_MA0143.3	-12	0	-	0	0	.
chr5	137462229	137462230	chr5:137462230:C:T	rs12189336	C	T	C	Sox2_MA0143.3	0	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr5	137462253	137462254	chr5:137462254:C:A	rs78344259	C	A	C	Sox2_MA0143.3	24	0	+	0	0	.
chr5	137564440	137564441	chr5:137564441:T:G	rs12187563	T	G	T	Sox2_MA0143.3	-18	0	-	0	0	.
chr5	137629754	137629755	chr5:137629755:A:G	rs565271339	A	G	A	Sox2_MA0143.3	6	1	-	9.613475778572903	2.7047209992576837	CCATTGTT
chr5	137631295	137631296	chr5:137631296:G:A	rs3822835	G	A	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr5	137673172	137673173	chr5:137673173:C:T	rs916862	C	T	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr5	138178571	138178572	chr5:138178572:C:T	rs1378596851	C	T	c	Sox2_MA0143.3	-8	0	-	0	0	.
chr5	138337933	138337934	chr5:138337934:C:A	rs56316522	C	A	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr5	138353059	138353060	chr5:138353060:G:C	chr5:138353060:G:C	G	C	G	Sox2_MA0143.3	5	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr5	138425210	138425211	chr5:138425211:G:C	rs78589002	G	C	C	Sox2_MA0143.3	14	0	-	0	0	.
chr5	138470116	138470117	chr5:138470117:C:G	rs75516147	C	G	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr5	138470139	138470140	chr5:138470140:C:A	rs115080567	C	A	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr5	138470175	138470176	chr5:138470176:C:T	rs142131520	C	T	C	Sox2_MA0143.3	16	0	+	0	0	.
chr5	138543071	138543072	chr5:138543072:C:T	rs140246937	C	T	C	Sox2_MA0143.3	-5	0	-	0	0	.
chr5	138543082	138543083	chr5:138543083:T:A	rs748090633	T	A	T	Sox2_MA0143.3	-16	0	-	0	0	.
chr5	138657883	138657884	chr5:138657884:A:G	rs10069845	A	G	A	Sox2_MA0143.3	-13	0	-	0	0	.
chr5	138669812	138669813	chr5:138669813:G:C	rs147254960	G	C	G	Sox2_MA0143.3	1	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr5	138887304	138887305	chr5:138887305:C:G	rs10515504	C	G	C	Sox2_MA0143.3	7	1	+	9.019595766176417	8.676919043985553	CCATTGTC
chr5	138923753	138923754	chr5:138923754:C:T	rs10054682	C	T	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr5	138953490	138953491	chr5:138953491:G:A	rs532671479	G	A	G	Sox2_MA0143.3	12	0	+	0	0	.
chr5	138970228	138970229	chr5:138970229:G:A	rs72788897	G	A	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr5	139293318	139293319	chr5:139293319:C:T	rs62383032	C	T	C	Sox2_MA0143.3	11	0	+	0	0	.
chr5	139448044	139448045	chr5:139448045:A:G	rs7446197	A	G	A	Sox2_MA0143.3	14	0	-	0	0	.
chr5	139454977	139454978	chr5:139454978:A:G	rs1013247033	A	G	A	Sox2_MA0143.3	-5	0	-	0	0	.
chr5	139474617	139474618	chr5:139474618:A:C	rs55792153	A	C	-	Sox2_MA0143.3	19	0	+	0	0	.
chr5	139487201	139487202	chr5:139487202:A:G	rs6421150	A	G	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr5	139562125	139562126	chr5:139562126:G:C	rs147671297	G	C	C	Sox2_MA0143.3	8	0	+	0	0	.
chr5	139564104	139564105	chr5:139564105:T:C	rs261534	T	C	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr5	139691194	139691195	chr5:139691195:A:T	rs4912756	A	T	T	Sox2_MA0143.3	-6	0	+	0	0	.
chr5	139732122	139732123	chr5:139732123:T:C	rs142795877	T	C	T	Sox2_MA0143.3	-14	0	-	0	0	.
chr5	139733950	139733951	chr5:139733951:G:A	rs372450147	G	A	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr5	139744041	139744042	chr5:139744042:T:C	rs165183	T	C	C	Sox2_MA0143.3	-20	0	-	0	0	.
chr5	139760001	139760002	chr5:139760002:G:T	rs260725	G	T	G	Sox2_MA0143.3	14	0	-	0	0	.
chr5	139913580	139913581	chr5:139913581:G:A	rs4912936	G	A	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr5	139916135	139916136	chr5:139916136:G:A	rs76178519	G	A	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr5	140108877	140108878	chr5:140108878:A:T	rs77205520	A	T	A	Sox2_MA0143.3	15	0	+	0	0	.
chr5	140137611	140137612	chr5:140137612:T:C	rs185123	T	C	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr5	140191296	140191297	chr5:140191297:A:G	rs73793718	A	G	A	Sox2_MA0143.3	-10	0	+	0	0	.
chr5	140246157	140246158	chr5:140246158:A:G	rs3822739	A	G	G	Sox2_MA0143.3	10	0	+	0	0	.
chr5	140357870	140357871	chr5:140357871:T:A	rs904673870	T	A	T	Sox2_MA0143.3	8	0	+	0	0	.
chr5	140401509	140401510	chr5:140401510:A:C	rs17286683	A	C	A	Sox2_MA0143.3	-19	0	+	0	0	.
chr5	140401528	140401529	chr5:140401529:C:T	rs117186414	C	T	C	Sox2_MA0143.3	0	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr5	140628919	140628920	chr5:140628920:A:G	rs2563315	A	G	A	Sox2_MA0143.3	11	0	-	0	0	.
chr5	140868953	140868954	chr5:140868954:C:T	rs192231	C	T	C	Sox2_MA0143.3	11	0	-	0	0	.
chr5	141050771	141050772	chr5:141050772:G:A	rs115315895	G	A	G	Sox2_MA0143.3	11	0	+	0	0	.
chr5	141100574	141100575	chr5:141100575:G:A	rs556998538	G	A	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr5	141123860	141123861	chr5:141123861:C:G	rs17844416	C	G	-	Sox2_MA0143.3	-1	0	-	0	0	.
chr5	141123948	141123949	chr5:141123949:C:T	rs17844417	C	T	-	Sox2_MA0143.3	-11	0	-	0	0	.
chr5	141184512	141184513	chr5:141184513:C:T	rs13176519	C	T	-	Sox2_MA0143.3	-11	0	-	0	0	.
chr5	141320269	141320270	chr5:141320270:G:A	rs145439224	G	A	G	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr5	141320272	141320273	chr5:141320273:T:G	rs11547633	T	G	T	Sox2_MA0143.3	-3	0	-	0	0	.
chr5	141369572	141369573	chr5:141369573:C:T	rs12188189	C	T	c	Sox2_MA0143.3	-10	0	-	0	0	.
chr5	141403509	141403510	chr5:141403510:C:T	rs201146573	C	T	c	Sox2_MA0143.3	5	1	-	9.019595766176417	2.110840986861197	CCATTGTC
chr5	141408282	141408283	chr5:141408283:C:G	rs62378453	C	G	c	Sox2_MA0143.3	14	0	+	0	0	.
chr5	141415560	141415561	chr5:141415561:T:C	rs11575963	T	C	t	Sox2_MA0143.3	6	1	+	9.206767037375712	2.298012258060492	CCTTTGTC
chr5	141477654	141477655	chr5:141477655:T:C	rs138608867	T	C	T	Sox2_MA0143.3	11	0	-	0	0	.
chr5	141521425	141521426	chr5:141521426:C:G	rs78329967	C	G	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr5	141523906	141523907	chr5:141523907:G:C	rs75364596	G	C	G	Sox2_MA0143.3	27	0	+	0	0	.
chr5	141657709	141657710	chr5:141657710:T:G	rs6895094	T	G	G	Sox2_MA0143.3	20	0	-	0	0	.
chr5	141673302	141673303	chr5:141673303:G:C	rs440279	G	C	C	Sox2_MA0143.3	16	0	-	0	0	.
chr5	141816752	141816753	chr5:141816753:G:A	rs188373374	G	A	G	Sox2_MA0143.3	0	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr5	141816766	141816767	chr5:141816767:G:C	rs17648891	G	C	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr5	141835900	141835901	chr5:141835901:A:G	rs449209	A	G	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr5	141841443	141841444	chr5:141841444:T:G	rs2974701	T	G	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr5	141858287	141858288	chr5:141858288:G:A	rs191081750	G	A	G	Sox2_MA0143.3	17	0	-	0	0	.
chr5	141945901	141945902	chr5:141945902:G:A	rs77423286	G	A	G	Sox2_MA0143.3	1	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr5	141956698	141956699	chr5:141956699:G:T	rs164075	G	T	T	Sox2_MA0143.3	7	1	+	8.676919043985553	9.613475778572903	CCATTGTG
chr5	142011773	142011774	chr5:142011774:G:A	rs140722541	G	A	G	Sox2_MA0143.3	16	0	+	0	0	.
chr5	142022278	142022279	chr5:142022279:G:A	rs661881	G	A	G	Sox2_MA0143.3	0	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr5	142022279	142022280	chr5:142022280:C:A	rs661880	C	A	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr5	142033195	142033196	chr5:142033196:G:A	rs34954154	G	A	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr5	142060585	142060586	chr5:142060586:A:G	rs153157	A	G	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr5	142060592	142060593	chr5:142060593:C:G	rs252147	C	G	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr5	142063804	142063805	chr5:142063805:G:T	rs146473853	G	T	G	Sox2_MA0143.3	20	0	-	0	0	.
chr5	142175949	142175950	chr5:142175950:A:G	rs9324871	A	G	A	Sox2_MA0143.3	8	0	+	0	0	.
chr5	142206895	142206896	chr5:142206896:A:T	rs2906063	A	T	T	Sox2_MA0143.3	-5	0	-	0	0	.
chr5	142206903	142206904	chr5:142206904:A:G	rs2906062	A	G	A	Sox2_MA0143.3	-13	0	-	0	0	.
chr5	142209049	142209050	chr5:142209050:A:T	rs2906059	A	T	T	Sox2_MA0143.3	12	0	+	0	0	.
chr5	142284465	142284466	chr5:142284466:G:A	rs6866256	G	A	A	Sox2_MA0143.3	7	1	+	8.676919043985553	3.3675628303222993	CCATTGTG
chr5	142334725	142334726	chr5:142334726:C:T	rs10037503	C	T	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr5	142347375	142347376	chr5:142347376:A:G	rs2913919	A	G	A	Sox2_MA0143.3	15	0	-	0	0	.
chr5	142439281	142439282	chr5:142439282:G:C	rs116211824	G	C	G	Sox2_MA0143.3	7	1	-	9.206767037375712	8.864090315184848	CCTTTGTC
chr5	142445630	142445631	chr5:142445631:C:T	rs17287294	C	T	C	Sox2_MA0143.3	19	0	-	0	0	.
chr5	142466684	142466685	chr5:142466685:C:T	rs765504050	C	T	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr5	142476799	142476800	chr5:142476800:C:T	rs72640111	C	T	C	Sox2_MA0143.3	21	0	+	0	0	.
chr5	142495819	142495820	chr5:142495820:A:G	rs13359593	A	G	a	Sox2_MA0143.3	-17	0	+	0	0	.
chr5	142532182	142532183	chr5:142532183:G:A	rs4912864	G	A	A	Sox2_MA0143.3	-15	0	+	0	0	.
chr5	142639802	142639803	chr5:142639803:G:T	rs12652485	G	T	T	Sox2_MA0143.3	0	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr5	142645229	142645230	chr5:142645230:C:T	rs75461396	C	T	C	Sox2_MA0143.3	-20	0	-	0	0	.
chr5	142664186	142664187	chr5:142664187:A:G	rs10064637	A	G	G	Sox2_MA0143.3	-5	0	+	0	0	.
chr5	142684637	142684638	chr5:142684638:C:T	rs11167786	C	T	T	Sox2_MA0143.3	-14	0	-	0	0	.
chr5	142720173	142720174	chr5:142720174:C:T	rs542850987	C	T	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr5	142740965	142740966	chr5:142740966:A:C	rs2339286	A	C	C	Sox2_MA0143.3	26	0	+	0	0	.
chr5	142740965	142740966	chr5:142740966:A:T	chr5:142740966:A:T	A	T	C	Sox2_MA0143.3	26	0	+	0	0	.
chr5	142758645	142758646	chr5:142758646:C:A	rs745636347	C	A	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr5	142779454	142779455	chr5:142779455:C:T	rs139904086	C	T	C	Sox2_MA0143.3	14	0	-	0	0	.
chr5	142803471	142803472	chr5:142803472:T:C	rs142967156	T	C	T	Sox2_MA0143.3	7	1	+	9.800647049772198	9.206767037375712	CCTTTGTT
chr5	142823489	142823490	chr5:142823490:C:T	rs35300	C	T	C	Sox2_MA0143.3	25	0	+	0	0	.
chr5	142852690	142852691	chr5:142852691:A:T	rs42866	A	T	T	Sox2_MA0143.3	11	0	-	0	0	.
chr5	142960500	142960501	chr5:142960501:A:G	rs114221382	A	G	A	Sox2_MA0143.3	19	0	+	0	0	.
chr5	142981792	142981793	chr5:142981793:T:C	rs245731	T	C	C	Sox2_MA0143.3	19	0	+	0	0	.
chr5	142983082	142983083	chr5:142983083:G:A	rs75503645	G	A	G	Sox2_MA0143.3	26	0	+	0	0	.
chr5	142991070	142991071	chr5:142991071:C:G	rs114038105	C	G	C	Sox2_MA0143.3	5	1	-	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr5	143004691	143004692	chr5:143004692:C:G	rs75903547	C	G	C	Sox2_MA0143.3	19	0	+	0	0	.
chr5	143033645	143033646	chr5:143033646:T:C	rs181404717	T	C	T	Sox2_MA0143.3	-3	0	+	0	0	.
chr5	143133617	143133618	chr5:143133618:A:G	rs7723598	A	G	A	Sox2_MA0143.3	-2	0	-	0	0	.
chr5	143207128	143207129	chr5:143207129:A:G	rs2074636	A	G	A	Sox2_MA0143.3	-16	0	+	0	0	.
chr5	143372424	143372425	chr5:143372425:T:C	rs72801080	T	C	T	Sox2_MA0143.3	18	0	-	0	0	.
chr5	143497720	143497721	chr5:143497721:G:A	rs4428446	G	A	G	Sox2_MA0143.3	1	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr5	143497741	143497742	chr5:143497742:C:T	rs4576177	C	T	C	Sox2_MA0143.3	-20	0	-	0	0	.
chr5	143499607	143499608	chr5:143499608:C:T	rs73797759	C	T	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr5	143562563	143562564	chr5:143562564:A:G	rs6580291	A	G	A	Sox2_MA0143.3	13	0	+	0	0	.
chr5	143596452	143596453	chr5:143596453:A:T	rs37390	A	T	A	Sox2_MA0143.3	-11	0	+	0	0	.
chr5	143596490	143596491	chr5:143596491:C:T	rs74328994	C	T	C	Sox2_MA0143.3	27	0	+	0	0	.
chr5	143604222	143604223	chr5:143604223:C:T	rs1644431	C	T	C	Sox2_MA0143.3	-5	0	-	0	0	.
chr5	143761456	143761457	chr5:143761457:T:G	rs17415614	T	G	T	Sox2_MA0143.3	22	0	-	0	0	.
chr5	143829795	143829796	chr5:143829796:G:A	rs13362373	G	A	G	Sox2_MA0143.3	11	0	+	0	0	.
chr5	143886154	143886155	chr5:143886155:A:T	rs7707919	A	T	A	Sox2_MA0143.3	-18	0	-	0	0	.
chr5	144011526	144011527	chr5:144011527:G:A	rs7700905	G	A	g	Sox2_MA0143.3	0	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr5	144028760	144028761	chr5:144028761:C:G	rs390601	C	G	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr5	144028791	144028792	chr5:144028792:C:G	rs116203534	C	G	C	Sox2_MA0143.3	23	0	+	0	0	.
chr5	144032730	144032731	chr5:144032731:T:C	rs72818823	T	C	T	Sox2_MA0143.3	6	1	+	8.676919043985553	1.7681642646703326	CCATTGTG
chr5	144076001	144076002	chr5:144076002:T:A	rs10055306	T	A	T	Sox2_MA0143.3	-13	0	+	0	0	.
chr5	144139761	144139762	chr5:144139762:A:G	rs11948123	A	G	A	Sox2_MA0143.3	23	0	+	0	0	.
chr5	144139762	144139763	chr5:144139763:T:C	rs72800557	T	C	C	Sox2_MA0143.3	24	0	+	0	0	.
chr5	144200248	144200249	chr5:144200249:C:T	rs6860529	C	T	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr5	144406375	144406376	chr5:144406376:A:G	rs13156674	A	G	A	Sox2_MA0143.3	-6	0	-	0	0	.
chr5	144548899	144548900	chr5:144548900:C:A	rs187193557	C	A	C	Sox2_MA0143.3	8	0	+	0	0	.
chr5	144754623	144754624	chr5:144754624:G:A	rs10477252	G	A	G	Sox2_MA0143.3	7	1	-	9.206767037375712	9.800647049772198	CCTTTGTC
chr5	144890039	144890040	chr5:144890040:C:T	rs72808536	C	T	c	Sox2_MA0143.3	-18	0	-	0	0	.
chr5	145218745	145218746	chr5:145218746:G:A	rs13170885	G	A	G	Sox2_MA0143.3	7	1	+	8.864090315184848	3.5547341015215945	CCTTTGTG
chr5	145511273	145511274	chr5:145511274:A:G	rs12657926	A	G	A	Sox2_MA0143.3	-7	0	-	0	0	.
chr5	145753064	145753065	chr5:145753065:T:C	rs62392325	T	C	T	Sox2_MA0143.3	-3	0	+	0	0	.
chr5	145753089	145753090	chr5:145753090:T:A	rs111519852	T	A	T	Sox2_MA0143.3	22	0	+	0	0	.
chr5	145835717	145835718	chr5:145835718:G:C	rs10045188	G	C	G	Sox2_MA0143.3	16	0	-	0	0	.
chr5	145979693	145979694	chr5:145979694:T:C	rs1432777	T	C	C	Sox2_MA0143.3	3	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr5	146019009	146019010	chr5:146019010:T:C	rs6897800	T	C	T	Sox2_MA0143.3	-4	0	+	0	0	.
chr5	146029035	146029036	chr5:146029036:A:G	rs6879988	A	G	A	Sox2_MA0143.3	14	0	-	0	0	.
chr5	146052954	146052955	chr5:146052955:A:G	rs7715679	A	G	G	Sox2_MA0143.3	19	0	+	0	0	.
chr5	146059239	146059240	chr5:146059240:A:G	rs143356170	A	G	A	Sox2_MA0143.3	-6	0	+	0	0	.
chr5	146088346	146088347	chr5:146088347:C:T	rs1006204	C	T	T	Sox2_MA0143.3	-3	0	+	0	0	.
chr5	146130697	146130698	chr5:146130698:A:G	rs1911112	A	G	A	Sox2_MA0143.3	-12	0	+	0	0	.
chr5	146130713	146130714	chr5:146130714:T:C	rs1911113	T	C	C	Sox2_MA0143.3	4	1	+	9.800647049772198	2.8918922704569785	CCTTTGTT
chr5	146345770	146345771	chr5:146345771:C:G	rs116282602	C	G	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr5	146356833	146356834	chr5:146356834:G:A	rs6870685	G	A	G	Sox2_MA0143.3	10	0	-	0	0	.
chr5	146361468	146361469	chr5:146361469:T:G	rs1432956	T	G	G	Sox2_MA0143.3	27	0	-	0	0	.
chr5	146540508	146540509	chr5:146540509:G:A	rs10037468	G	A	A	Sox2_MA0143.3	11	0	-	0	0	.
chr5	146540525	146540526	chr5:146540526:A:G	rs74585442	A	G	A	Sox2_MA0143.3	-6	0	-	0	0	.
chr5	146564564	146564565	chr5:146564565:C:T	rs751163526	C	T	C	Sox2_MA0143.3	19	0	+	0	0	.
chr5	146580839	146580840	chr5:146580840:G:A	rs60317913	G	A	G	Sox2_MA0143.3	20	0	-	0	0	.
chr5	146618562	146618563	chr5:146618563:A:G	rs382817	A	G	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr5	146653480	146653481	chr5:146653481:G:T	rs405549	G	T	T	Sox2_MA0143.3	-20	0	-	0	0	.
chr5	146675937	146675938	chr5:146675938:C:T	rs117386490	C	T	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr5	146744502	146744503	chr5:146744503:A:G	rs141896573	A	G	A	Sox2_MA0143.3	3	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr5	146784887	146784888	chr5:146784888:G:A	rs183665	G	A	A	Sox2_MA0143.3	25	0	-	0	0	.
chr5	147122673	147122674	chr5:147122674:T:G	rs2963142	T	G	T	Sox2_MA0143.3	-10	0	+	0	0	.
chr5	147161096	147161097	chr5:147161097:G:A	rs189242440	G	A	G	Sox2_MA0143.3	27	0	-	0	0	.
chr5	147319467	147319468	chr5:147319468:T:G	rs7713732	T	G	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr5	147382903	147382904	chr5:147382904:A:G	rs115480034	A	G	A	Sox2_MA0143.3	6	1	-	9.613475778572903	2.7047209992576837	CCATTGTT
chr5	147392414	147392415	chr5:147392415:C:T	rs1049171	C	T	T	Sox2_MA0143.3	5	1	-	9.019595766176417	2.110840986861197	CCATTGTC
chr5	147395911	147395912	chr5:147395912:T:G	rs2288806	T	G	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr5	147398685	147398686	chr5:147398686:C:T	rs10052013	C	T	T	Sox2_MA0143.3	-12	0	-	0	0	.
chr5	147452760	147452761	chr5:147452761:G:C	chr5:147452761:G:C	G	C	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr5	147452777	147452778	chr5:147452778:T:C	rs17106761	T	C	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr5	147454247	147454248	chr5:147454248:G:A	rs925175263	G	A	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr5	147474165	147474166	chr5:147474166:A:C	rs184751146	A	C	A	Sox2_MA0143.3	6	1	-	8.676919043985553	1.7681642646703326	CCATTGTG
chr5	147560795	147560796	chr5:147560796:C:T	rs73266224	C	T	T	Sox2_MA0143.3	26	0	-	0	0	.
chr5	147614287	147614288	chr5:147614288:A:G	rs7704474	A	G	A	Sox2_MA0143.3	-6	0	-	0	0	.
chr5	147708781	147708782	chr5:147708782:A:G	rs7713108	A	G	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr5	147714166	147714167	chr5:147714167:C:T	rs7720860	C	T	C	Sox2_MA0143.3	26	0	-	0	0	.
chr5	147784581	147784582	chr5:147784582:A:G	rs114489183	A	G	A	Sox2_MA0143.3	13	0	+	0	0	.
chr5	147784585	147784586	chr5:147784586:T:A	chr5:147784586:T:A	T	A	T	Sox2_MA0143.3	17	0	+	0	0	.
chr5	147855831	147855832	chr5:147855832:T:C	rs116743228	T	C	T	Sox2_MA0143.3	-9	0	+	0	0	.
chr5	148249067	148249068	chr5:148249068:G:A	rs1432699	G	A	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr5	148383659	148383660	chr5:148383660:G:A	rs192735257	G	A	G	Sox2_MA0143.3	0	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr5	148403556	148403557	chr5:148403557:A:G	rs139004246	A	G	A	Sox2_MA0143.3	23	0	+	0	0	.
chr5	148493833	148493834	chr5:148493834:T:C	rs7716435	T	C	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr5	148697367	148697368	chr5:148697368:G:A	chr5:148697368:G:A	G	A	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr5	148775968	148775969	chr5:148775969:C:A	rs30311	C	A	C	Sox2_MA0143.3	11	0	+	0	0	.
chr5	148795338	148795339	chr5:148795339:A:G	rs73795143	A	G	A	Sox2_MA0143.3	6	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr5	148880443	148880444	chr5:148880444:C:T	rs2082383	C	T	C	Sox2_MA0143.3	9	0	+	0	0	.
chr5	148881659	148881660	chr5:148881660:T:A	rs990506	T	A	A	Sox2_MA0143.3	14	0	-	0	0	.
chr5	148922966	148922967	chr5:148922967:T:C	rs374499128	T	C	T	Sox2_MA0143.3	2	1	+	3.5547341015215945	-2.751084876953981	CCTTTGTA
chr5	148931034	148931035	chr5:148931035:C:T	rs12658642	C	T	C	Sox2_MA0143.3	0	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr5	148931043	148931044	chr5:148931044:T:C	rs4141013	T	C	T	Sox2_MA0143.3	9	0	+	0	0	.
chr5	148966455	148966456	chr5:148966456:C:A	rs34246418	C	A	C	Sox2_MA0143.3	5	1	-	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr5	148987674	148987675	chr5:148987675:G:C	rs75086059	G	C	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr5	148996599	148996600	chr5:148996600:T:G	rs17109205	T	G	T	Sox2_MA0143.3	-5	0	+	0	0	.
chr5	149073162	149073163	chr5:149073163:T:C	rs417413	T	C	C	Sox2_MA0143.3	16	0	-	0	0	.
chr5	149138338	149138339	chr5:149138339:T:C	rs115698204	T	C	T	Sox2_MA0143.3	-11	0	-	0	0	.
chr5	149206330	149206331	chr5:149206331:G:A	rs112180801	G	A	G	Sox2_MA0143.3	18	0	-	0	0	.
chr5	149221027	149221028	chr5:149221028:A:G	rs76721955	A	G	A	Sox2_MA0143.3	3	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr5	149221034	149221035	chr5:149221035:T:C	rs11957611	T	C	T	Sox2_MA0143.3	-4	0	-	0	0	.
chr5	149284680	149284681	chr5:149284681:A:G	rs352357	A	G	G	Sox2_MA0143.3	11	0	-	0	0	.
chr5	149289468	149289469	chr5:149289469:G:C	rs1659099	G	C	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr5	149360738	149360739	chr5:149360739:A:G	rs1693919	A	G	G	Sox2_MA0143.3	6	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr5	149413289	149413290	chr5:149413290:T:C	rs10476909	T	C	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr5	149414716	149414717	chr5:149414717:G:A	rs58365577	G	A	G	Sox2_MA0143.3	18	0	-	0	0	.
chr5	149439203	149439204	chr5:149439204:G:C	rs370524	G	C	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr5	149453527	149453528	chr5:149453528:C:A	rs146507285	C	A	C	Sox2_MA0143.3	13	0	-	0	0	.
chr5	149581433	149581434	chr5:149581434:C:G	chr5:149581434:C:G	C	G	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr5	149581996	149581997	chr5:149581997:G:C	rs79899373	G	C	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr5	149709585	149709586	chr5:149709586:C:T	rs6864597	C	T	C	Sox2_MA0143.3	1	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr5	149781326	149781327	chr5:149781327:G:A	rs10476919	G	A	G	Sox2_MA0143.3	-9	0	+	0	0	.
chr5	149808076	149808077	chr5:149808077:G:A	rs75294071	G	A	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr5	149827592	149827593	chr5:149827593:C:A	rs11745113	C	A	C	Sox2_MA0143.3	27	0	+	0	0	.
chr5	149828695	149828696	chr5:149828696:G:C	rs1430225668	G	C	G	Sox2_MA0143.3	11	0	+	0	0	.
chr5	149831639	149831640	chr5:149831640:A:G	rs113874251	A	G	G	Sox2_MA0143.3	-3	0	+	0	0	.
chr5	149853312	149853313	chr5:149853313:C:T	rs137998436	C	T	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr5	149887767	149887768	chr5:149887768:A:G	rs2544935	A	G	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr5	149941579	149941580	chr5:149941580:G:A	rs1368427	G	A	G	Sox2_MA0143.3	13	0	+	0	0	.
chr5	149941582	149941583	chr5:149941583:T:C	rs1368428	T	C	T	Sox2_MA0143.3	16	0	+	0	0	.
chr5	149967396	149967397	chr5:149967397:C:G	rs245050	C	G	C	Sox2_MA0143.3	18	0	+	0	0	.
chr5	150055390	150055391	chr5:150055391:C:T	rs72832135	C	T	C	Sox2_MA0143.3	21	0	+	0	0	.
chr5	150108204	150108205	chr5:150108205:A:G	rs17798680	A	G	G	Sox2_MA0143.3	8	0	-	0	0	.
chr5	150118659	150118660	chr5:150118660:C:T	rs150263966	C	T	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr5	150142140	150142141	chr5:150142141:C:T	rs138450112	C	T	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr5	150168165	150168166	chr5:150168166:G:A	rs115145667	G	A	G	Sox2_MA0143.3	9	0	+	0	0	.
chr5	150173387	150173388	chr5:150173388:A:G	rs6887332	A	G	G	Sox2_MA0143.3	11	0	+	0	0	.
chr5	150258442	150258443	chr5:150258443:G:A	chr5:150258443:G:A	G	A	G	Sox2_MA0143.3	0	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr5	150326885	150326886	chr5:150326886:T:G	rs12651800	T	G	G	Sox2_MA0143.3	3	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr5	150393368	150393369	chr5:150393369:C:T	rs11743855	C	T	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr5	150422172	150422173	chr5:150422173:G:C	rs4958519	G	C	C	Sox2_MA0143.3	10	0	-	0	0	.
chr5	150497775	150497776	chr5:150497776:G:A	rs7730755	G	A	G	Sox2_MA0143.3	12	0	+	0	0	.
chr5	150498665	150498666	chr5:150498666:T:A	rs80147358	T	A	T	Sox2_MA0143.3	-1	0	+	0	0	.
chr5	150544405	150544406	chr5:150544406:G:A	rs17713523	G	A	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr5	150605204	150605205	chr5:150605205:G:T	rs190841297	G	T	G	Sox2_MA0143.3	14	0	+	0	0	.
chr5	150742741	150742742	chr5:150742742:C:A	rs995755440	C	A	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr5	150781790	150781791	chr5:150781791:A:G	rs17111358	A	G	A	Sox2_MA0143.3	-7	0	+	0	0	.
chr5	150781808	150781809	chr5:150781809:C:T	rs116653862	C	T	C	Sox2_MA0143.3	11	0	+	0	0	.
chr5	151005657	151005658	chr5:151005658:C:A	rs149891840	C	A	C	Sox2_MA0143.3	18	0	-	0	0	.
chr5	151067528	151067529	chr5:151067529:A:G	rs6880110	A	G	G	Sox2_MA0143.3	2	1	-	9.206767037375712	2.900948058900136	CCTTTGTC
chr5	151068704	151068705	chr5:151068705:T:C	rs58314838	T	C	T	Sox2_MA0143.3	-15	0	-	0	0	.
chr5	151076170	151076171	chr5:151076171:A:G	rs3792783	A	G	G	Sox2_MA0143.3	6	1	-	8.676919043985553	1.7681642646703326	CCATTGTG
chr5	151083638	151083639	chr5:151083639:C:T	rs191087884	C	T	C	Sox2_MA0143.3	1	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr5	151107349	151107350	chr5:151107350:A:G	rs76034735	A	G	A	Sox2_MA0143.3	-18	0	-	0	0	.
chr5	151126005	151126006	chr5:151126006:G:T	rs116526315	G	T	G	Sox2_MA0143.3	5	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr5	151133408	151133409	chr5:151133409:C:T	rs34820236	C	T	T	Sox2_MA0143.3	23	0	+	0	0	.
chr5	151197264	151197265	chr5:151197265:T:C	rs115926331	T	C	T	Sox2_MA0143.3	-5	0	-	0	0	.
chr5	151202582	151202583	chr5:151202583:T:C	rs72792113	T	C	T	Sox2_MA0143.3	18	0	-	0	0	.
chr5	151202894	151202895	chr5:151202895:G:T	rs248457	G	T	G	Sox2_MA0143.3	23	0	-	0	0	.
chr5	151202932	151202933	chr5:151202933:A:G	rs34182166	A	G	A	Sox2_MA0143.3	-15	0	-	0	0	.
chr5	151241506	151241507	chr5:151241507:T:G	chr5:151241507:T:G	T	G	T	Sox2_MA0143.3	6	1	+	9.019595766176417	2.110840986861197	CCATTGTC
chr5	151272213	151272214	chr5:151272214:A:G	rs1065018	A	G	A	Sox2_MA0143.3	18	0	-	0	0	.
chr5	151436999	151437000	chr5:151437000:A:C	rs1508772	A	C	C	Sox2_MA0143.3	24	0	+	0	0	.
chr5	151451971	151451972	chr5:151451972:G:A	rs147169217	G	A	G	Sox2_MA0143.3	-5	0	+	0	0	.
chr5	151455787	151455788	chr5:151455788:A:G	rs12655145	A	G	G	Sox2_MA0143.3	15	0	+	0	0	.
chr5	151465085	151465086	chr5:151465086:C:G	rs34478431	C	G	.	Sox2_MA0143.3	1	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr5	151509373	151509374	chr5:151509374:A:G	rs1864935	A	G	G	Sox2_MA0143.3	14	0	-	0	0	.
chr5	151509377	151509378	chr5:151509378:T:C	rs74898030	T	C	T	Sox2_MA0143.3	10	0	-	0	0	.
chr5	151533453	151533454	chr5:151533454:C:T	rs67495387	C	T	T	Sox2_MA0143.3	-7	0	+	0	0	.
chr5	151566369	151566370	chr5:151566370:C:T	rs3734058	C	T	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr5	151569362	151569363	chr5:151569363:T:G	rs1549918	T	G	T	Sox2_MA0143.3	3	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr5	151614209	151614210	chr5:151614210:C:T	rs75972507	C	T	C	Sox2_MA0143.3	18	0	-	0	0	.
chr5	151694266	151694267	chr5:151694267:C:G	rs6876351	C	G	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr5	151697233	151697234	chr5:151697234:A:G	rs9324704	A	G	G	Sox2_MA0143.3	16	0	+	0	0	.
chr5	151699639	151699640	chr5:151699640:C:G	rs192793509	C	G	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr5	151763316	151763317	chr5:151763317:T:C	rs2964584	T	C	T	Sox2_MA0143.3	-15	0	+	0	0	.
chr5	151771039	151771040	chr5:151771040:C:G	rs2915877	C	G	C	Sox2_MA0143.3	11	0	-	0	0	.
chr5	151771040	151771041	chr5:151771041:T:G	rs2964576	T	G	T	Sox2_MA0143.3	10	0	-	0	0	.
chr5	151784462	151784463	chr5:151784463:G:C	rs7356721	G	C	G	Sox2_MA0143.3	5	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr5	151795640	151795641	chr5:151795641:G:C	rs10059511	G	C	G	Sox2_MA0143.3	5	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr5	151881298	151881299	chr5:151881299:A:G	rs2964601	A	G	A	Sox2_MA0143.3	7	1	+	3.5547341015215945	8.864090315184848	CCTTTGTA
chr5	151911163	151911164	chr5:151911164:G:A	rs7709656	G	A	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr5	151931450	151931451	chr5:151931451:T:C	rs4541650	T	C	T	Sox2_MA0143.3	27	0	+	0	0	.
chr5	152008347	152008348	chr5:152008348:C:A	rs413125	C	A	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr5	152061569	152061570	chr5:152061570:T:C	rs6878015	T	C	C	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr5	152178451	152178452	chr5:152178452:C:G	rs62396575	C	G	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr5	152178636	152178637	chr5:152178637:G:A	rs294968	G	A	A	Sox2_MA0143.3	-15	0	+	0	0	.
chr5	152462988	152462989	chr5:152462989:A:T	rs59306112	A	T	T	Sox2_MA0143.3	3	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr5	152567716	152567717	chr5:152567717:G:C	rs576399880	G	C	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr5	152751969	152751970	chr5:152751970:T:C	rs73274542	T	C	T	Sox2_MA0143.3	-2	0	+	0	0	.
chr5	153122088	153122089	chr5:153122089:T:G	rs4509080	T	G	G	Sox2_MA0143.3	18	0	-	0	0	.
chr5	153323474	153323475	chr5:153323475:T:C	rs300328	T	C	C	Sox2_MA0143.3	8	0	-	0	0	.
chr5	153373750	153373751	chr5:153373751:G:C	rs304890	G	C	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr5	153390877	153390878	chr5:153390878:T:A	rs13178643	T	A	T	Sox2_MA0143.3	-11	0	+	0	0	.
chr5	153494988	153494989	chr5:153494989:G:A	rs4145160	G	A	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr5	153555867	153555868	chr5:153555868:G:A	rs10515693	G	A	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr5	153674765	153674766	chr5:153674766:G:A	rs7709884	G	A	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr5	153690831	153690832	chr5:153690832:C:T	rs13189947	C	T	C	Sox2_MA0143.3	18	0	+	0	0	.
chr5	153750378	153750379	chr5:153750379:G:A	rs76385160	G	A	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr5	153764655	153764656	chr5:153764656:A:G	rs3813470	A	G	G	Sox2_MA0143.3	13	0	+	0	0	.
chr5	153900270	153900271	chr5:153900271:C:T	rs1080671	C	T	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr5	154197960	154197961	chr5:154197961:C:T	rs6860445	C	T	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr5	154202969	154202970	chr5:154202970:C:T	rs77134751	C	T	C	Sox2_MA0143.3	23	0	-	0	0	.
chr5	154222097	154222098	chr5:154222098:T:C	rs13169185	T	C	T	Sox2_MA0143.3	-10	0	+	0	0	.
chr5	154231687	154231688	chr5:154231688:A:G	rs2112687	A	G	A	Sox2_MA0143.3	-7	0	+	0	0	.
chr5	154243859	154243860	chr5:154243860:T:A	rs56930823	T	A	T	Sox2_MA0143.3	25	0	+	0	0	.
chr5	154260485	154260486	chr5:154260486:A:G	rs2434529	A	G	A	Sox2_MA0143.3	8	0	+	0	0	.
chr5	154260747	154260748	chr5:154260748:G:A	rs2443517	G	A	A	Sox2_MA0143.3	16	0	+	0	0	.
chr5	154279153	154279154	chr5:154279154:G:T	rs253549	G	T	T	Sox2_MA0143.3	21	0	-	0	0	.
chr5	154397892	154397893	chr5:154397893:C:T	rs7735907	C	T	T	Sox2_MA0143.3	-15	0	+	0	0	.
chr5	154397909	154397910	chr5:154397910:A:T	rs59475849	A	T	A	Sox2_MA0143.3	2	1	+	8.676919043985553	8.864090315184848	CCATTGTG
chr5	154485371	154485372	chr5:154485372:G:C	rs7720917	G	C	G	Sox2_MA0143.3	18	0	+	0	0	.
chr5	154492609	154492610	chr5:154492610:G:A	rs13185595	G	A	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr5	154507489	154507490	chr5:154507490:T:C	rs77559672	T	C	T	Sox2_MA0143.3	3	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr5	154676622	154676623	chr5:154676623:G:A	rs4958757	G	A	G	Sox2_MA0143.3	-5	0	+	0	0	.
chr5	154859583	154859584	chr5:154859584:G:C	chr5:154859584:G:C	G	C	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr5	154886026	154886027	chr5:154886027:T:C	rs2688186	T	C	C	Sox2_MA0143.3	13	0	+	0	0	.
chr5	154945640	154945641	chr5:154945641:G:C	rs115755691	G	C	G	Sox2_MA0143.3	26	0	-	0	0	.
chr5	154968991	154968992	chr5:154968992:C:T	rs286595	C	T	C	Sox2_MA0143.3	9	0	+	0	0	.
chr5	155264045	155264046	chr5:155264046:G:A	rs11748833	G	A	G	Sox2_MA0143.3	0	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr5	155275453	155275454	chr5:155275454:G:A	rs112682866	G	A	A	Sox2_MA0143.3	23	0	+	0	0	.
chr5	155300062	155300063	chr5:155300063:A:G	rs62379777	A	G	A	Sox2_MA0143.3	10	0	-	0	0	.
chr5	155302357	155302358	chr5:155302358:C:G	rs31702	C	G	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr5	155416884	155416885	chr5:155416885:G:C	rs4958805	G	C	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr5	155483216	155483217	chr5:155483217:C:T	rs2552977	C	T	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr5	155640609	155640610	chr5:155640610:T:G	rs2544761	T	G	T	Sox2_MA0143.3	-10	0	+	0	0	.
chr5	155665802	155665803	chr5:155665803:A:G	rs17118190	A	G	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr5	155897854	155897855	chr5:155897855:T:C	rs73810343	T	C	T	Sox2_MA0143.3	24	0	+	0	0	.
chr5	156137988	156137989	chr5:156137989:A:T	rs256772	A	T	A	Sox2_MA0143.3	-4	0	-	0	0	.
chr5	156139913	156139914	chr5:156139914:G:A	rs256770	G	A	A	Sox2_MA0143.3	5	1	+	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr5	156178274	156178275	chr5:156178275:G:A	rs28407242	G	A	A	Sox2_MA0143.3	13	0	+	0	0	.
chr5	156202699	156202700	chr5:156202700:C:T	rs17053328	C	T	C	Sox2_MA0143.3	5	1	-	8.676919043985553	1.7681642646703324	CCATTGTG
chr5	156243065	156243066	chr5:156243066:G:A	rs17053358	G	A	G	Sox2_MA0143.3	24	0	-	0	0	.
chr5	156473390	156473391	chr5:156473391:C:T	rs1504936	C	T	T	Sox2_MA0143.3	17	0	-	0	0	.
chr5	156533158	156533159	chr5:156533159:G:T	rs12517691	G	T	G	Sox2_MA0143.3	5	1	+	8.676919043985553	1.7681642646703324	CCATTGTG
chr5	156591855	156591856	chr5:156591856:T:G	rs187452560	T	G	t	Sox2_MA0143.3	19	0	-	0	0	.
chr5	156706887	156706888	chr5:156706888:T:C	rs157341	T	C	T	Sox2_MA0143.3	15	0	+	0	0	.
chr5	156709070	156709071	chr5:156709071:A:G	rs157346	A	G	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr5	156929282	156929283	chr5:156929283:T:C	rs75152650	T	C	T	Sox2_MA0143.3	11	0	-	0	0	.
chr5	156932530	156932531	chr5:156932531:C:T	rs10079117	C	T	C	Sox2_MA0143.3	-5	0	-	0	0	.
chr5	157027210	157027211	chr5:157027211:A:G	rs35711263	A	G	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr5	157052412	157052413	chr5:157052413:A:C	rs1553317	A	C	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr5	157052414	157052415	chr5:157052415:T:C	rs12522248	T	C	T	Sox2_MA0143.3	-10	0	-	0	0	.
chr5	157057614	157057615	chr5:157057615:A:T	rs4704839	A	T	T	Sox2_MA0143.3	23	0	-	0	0	.
chr5	157057636	157057637	chr5:157057637:G:C	rs4704840	G	C	C	Sox2_MA0143.3	1	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr5	157063819	157063820	chr5:157063820:T:C	rs62381166	T	C	T	Sox2_MA0143.3	16	0	-	0	0	.
chr5	157113384	157113385	chr5:157113385:A:G	rs6861017	A	G	a	Sox2_MA0143.3	11	0	-	0	0	.
chr5	157181901	157181902	chr5:157181902:T:C	rs12518271	T	C	T	Sox2_MA0143.3	25	0	-	0	0	.
chr5	157219985	157219986	chr5:157219986:A:G	rs30155	A	G	A	Sox2_MA0143.3	-19	0	-	0	0	.
chr5	157271114	157271115	chr5:157271115:G:A	rs2241417	G	A	A	Sox2_MA0143.3	24	0	+	0	0	.
chr5	157272052	157272053	chr5:157272053:C:T	rs77907011	C	T	C	Sox2_MA0143.3	10	0	-	0	0	.
chr5	157289825	157289826	chr5:157289826:A:G	rs401200	A	G	G	Sox2_MA0143.3	6	1	-	9.613475778572903	2.7047209992576837	CCATTGTT
chr5	157305972	157305973	chr5:157305973:C:G	rs745630930	C	G	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr5	157305980	157305981	chr5:157305981:A:G	rs435903	A	G	A	Sox2_MA0143.3	-10	0	+	0	0	.
chr5	157368625	157368626	chr5:157368626:G:A	rs11738676	G	A	G	Sox2_MA0143.3	7	1	+	8.864090315184848	3.5547341015215945	CCTTTGTG
chr5	157390367	157390368	chr5:157390368:C:T	rs7724666	C	T	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr5	157456511	157456512	chr5:157456512:C:G	rs562043581	C	G	C	Sox2_MA0143.3	9	0	+	0	0	.
chr5	157507720	157507721	chr5:157507721:G:T	rs61516797	G	T	G	Sox2_MA0143.3	-12	0	+	0	0	.
chr5	157573482	157573483	chr5:157573483:C:G	rs188597914	C	G	C	Sox2_MA0143.3	-5	0	-	0	0	.
chr5	157577637	157577638	chr5:157577638:A:G	rs11465217	A	G	A	Sox2_MA0143.3	11	0	+	0	0	.
chr5	157604103	157604104	chr5:157604104:A:G	rs11134828	A	G	A	Sox2_MA0143.3	-11	0	+	0	0	.
chr5	157677152	157677153	chr5:157677153:T:C	rs10050851	T	C	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr5	157691229	157691230	chr5:157691230:T:C	rs73815357	T	C	T	Sox2_MA0143.3	26	0	-	0	0	.
chr5	157691272	157691273	chr5:157691273:T:C	rs73815359	T	C	T	Sox2_MA0143.3	-17	0	-	0	0	.
chr5	157764945	157764946	chr5:157764946:G:A	rs7713308	G	A	A	Sox2_MA0143.3	-5	0	+	0	0	.
chr5	157967494	157967495	chr5:157967495:C:T	rs113700836	C	T	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr5	157976632	157976633	chr5:157976633:G:A	rs2111155	G	A	G	Sox2_MA0143.3	-14	0	+	0	0	.
chr5	158055466	158055467	chr5:158055467:G:T	rs74652789	G	T	G	Sox2_MA0143.3	1	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr5	158100027	158100028	chr5:158100028:G:A	rs17055271	G	A	G	Sox2_MA0143.3	5	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr5	158137860	158137861	chr5:158137861:A:G	rs4639206	A	G	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr5	158234862	158234863	chr5:158234863:T:C	rs1173470	T	C	C	Sox2_MA0143.3	2	1	+	9.800647049772198	3.494828071296623	CCTTTGTT
chr5	158305465	158305466	chr5:158305466:T:C	rs148036164	T	C	T	Sox2_MA0143.3	-11	0	+	0	0	.
chr5	158368683	158368684	chr5:158368684:G:A	rs2773217	G	A	G	Sox2_MA0143.3	-3	0	-	0	0	.
chr5	158368692	158368693	chr5:158368693:G:A	rs7723923	G	A	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr5	158543825	158543826	chr5:158543826:G:A	rs180795514	G	A	G	Sox2_MA0143.3	16	0	+	0	0	.
chr5	158565214	158565215	chr5:158565215:T:A	rs890945	T	A	T	Sox2_MA0143.3	-16	0	+	0	0	.
chr5	158599462	158599463	chr5:158599463:A:G	rs74838682	A	G	A	Sox2_MA0143.3	12	0	-	0	0	.
chr5	158599477	158599478	chr5:158599478:T:C	rs565753593	T	C	T	Sox2_MA0143.3	-3	0	-	0	0	.
chr5	158635347	158635348	chr5:158635348:A:G	rs2909773	A	G	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr5	158913863	158913864	chr5:158913864:G:C	rs7737883	G	C	C	Sox2_MA0143.3	0	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr5	158967913	158967914	chr5:158967914:A:G	rs775352939	A	G	A	Sox2_MA0143.3	13	0	-	0	0	.
chr5	158970559	158970560	chr5:158970560:G:A	chr5:158970560:G:A	G	A	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr5	159030517	159030518	chr5:159030518:G:A	rs13174985	G	A	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr5	159181816	159181817	chr5:159181817:C:T	rs3213859	C	T	T	Sox2_MA0143.3	9	0	-	0	0	.
chr5	159428053	159428054	chr5:159428054:C:A	rs112528531	C	A	C	Sox2_MA0143.3	8	0	-	0	0	.
chr5	159488502	159488503	chr5:159488503:C:T	rs13360243	C	T	C	Sox2_MA0143.3	23	0	-	0	0	.
chr5	159521953	159521954	chr5:159521954:A:C	rs10037360	A	C	A	Sox2_MA0143.3	4	1	-	9.206767037375712	2.2980122580604916	CCTTTGTC
chr5	159582265	159582266	chr5:159582266:G:A	rs11948965	G	A	A	Sox2_MA0143.3	27	0	-	0	0	.
chr5	159681732	159681733	chr5:159681733:G:A	rs9986126	G	A	A	Sox2_MA0143.3	20	0	+	0	0	.
chr5	159697829	159697830	chr5:159697830:C:G	rs6895322	C	G	C	Sox2_MA0143.3	11	0	+	0	0	.
chr5	159787199	159787200	chr5:159787200:C:T	rs533048211	C	T	T	Sox2_MA0143.3	16	0	+	0	0	.
chr5	159982656	159982657	chr5:159982657:C:T	rs914911663	C	T	C	Sox2_MA0143.3	8	0	+	0	0	.
chr5	160160224	160160225	chr5:160160225:A:G	rs2546985	A	G	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr5	160160229	160160230	chr5:160160230:G:A	rs72810166	G	A	G	Sox2_MA0143.3	-2	0	+	0	0	.
chr5	160243417	160243418	chr5:160243418:C:G	rs4593304	C	G	C	Sox2_MA0143.3	23	0	+	0	0	.
chr5	160269546	160269547	chr5:160269547:A:G	rs10071116	A	G	G	Sox2_MA0143.3	15	0	+	0	0	.
chr5	160278457	160278458	chr5:160278458:G:C	rs921051548	G	C	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr5	160353672	160353673	chr5:160353673:G:T	rs62377485	G	T	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr5	160358008	160358009	chr5:160358009:T:C	rs80247458	T	C	T	Sox2_MA0143.3	16	0	-	0	0	.
chr5	160439284	160439285	chr5:160439285:C:G	chr5:160439285:C:G	C	G	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr5	160469533	160469534	chr5:160469534:G:A	rs2431688	G	A	G	Sox2_MA0143.3	13	0	-	0	0	.
chr5	160474138	160474139	chr5:160474139:T:A	rs67684732	T	A	T	Sox2_MA0143.3	4	1	+	9.206767037375712	2.2980122580604916	CCTTTGTC
chr5	160507587	160507588	chr5:160507588:A:G	rs72816358	A	G	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr5	160511411	160511412	chr5:160511412:G:A	rs71603668	G	A	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr5	160511456	160511457	chr5:160511457:A:C	rs71603669	A	C	A	Sox2_MA0143.3	26	0	+	0	0	.
chr5	160549456	160549457	chr5:160549457:C:T	rs10515809	C	T	C	Sox2_MA0143.3	9	0	-	0	0	.
chr5	160549472	160549473	chr5:160549473:G:C	rs10515810	G	C	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr5	160588169	160588170	chr5:160588170:T:C	rs12653513	T	C	T	Sox2_MA0143.3	-14	0	-	0	0	.
chr5	160630474	160630475	chr5:160630475:G:C	rs6892689	G	C	C	Sox2_MA0143.3	-20	0	-	0	0	.
chr5	160800532	160800533	chr5:160800533:T:C	rs114755962	T	C	T	Sox2_MA0143.3	4	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr5	160888061	160888062	chr5:160888062:G:T	rs10074326	G	T	G	Sox2_MA0143.3	1	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr5	161020354	161020355	chr5:161020355:C:T	rs6894598	C	T	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr5	161193610	161193611	chr5:161193611:T:C	rs17058880	T	C	T	Sox2_MA0143.3	14	0	-	0	0	.
chr5	161333611	161333612	chr5:161333612:A:G	rs73316976	A	G	A	Sox2_MA0143.3	18	0	+	0	0	.
chr5	161731775	161731776	chr5:161731776:C:G	rs4921412	C	G	G	Sox2_MA0143.3	13	0	-	0	0	.
chr5	162174482	162174483	chr5:162174483:A:G	rs55684452	A	G	A	Sox2_MA0143.3	-8	0	+	0	0	.
chr5	162190090	162190091	chr5:162190091:A:T	rs2103477	A	T	A	Sox2_MA0143.3	-4	0	+	0	0	.
chr5	162768574	162768575	chr5:162768575:T:G	rs749952361	T	G	t	Sox2_MA0143.3	27	0	-	0	0	.
chr5	162895608	162895609	chr5:162895609:A:G	rs10058391	A	G	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr5	163283570	163283571	chr5:163283571:G:A	rs1863962	G	A	G	Sox2_MA0143.3	9	0	+	0	0	.
chr5	163458838	163458839	chr5:163458839:T:G	rs299288	T	G	T	Sox2_MA0143.3	6	1	+	9.613475778572903	2.7047209992576837	CCATTGTT
chr5	163462026	163462027	chr5:163462027:G:A	rs149069501	G	A	G	Sox2_MA0143.3	22	0	-	0	0	.
chr5	163632116	163632117	chr5:163632117:G:A	rs6880977	G	A	G	Sox2_MA0143.3	0	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr5	163846512	163846513	chr5:163846513:A:G	rs6881701	A	G	A	Sox2_MA0143.3	25	0	+	0	0	.
chr5	163920260	163920261	chr5:163920261:C:G	rs2545000	C	G	C	Sox2_MA0143.3	26	0	+	0	0	.
chr5	163977287	163977288	chr5:163977288:C:A	rs1363493	C	A	A	Sox2_MA0143.3	-16	0	+	0	0	.
chr5	164418729	164418730	chr5:164418730:T:C	rs13179075	T	C	T	Sox2_MA0143.3	-9	0	+	0	0	.
chr5	164470411	164470412	chr5:164470412:G:A	rs1352547	G	A	G	Sox2_MA0143.3	1	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr5	164651807	164651808	chr5:164651808:T:G	rs182782999	T	G	T	Sox2_MA0143.3	20	0	-	0	0	.
chr5	165174392	165174393	chr5:165174393:T:C	rs13362411	T	C	T	Sox2_MA0143.3	-8	0	-	0	0	.
chr5	165184047	165184048	chr5:165184048:G:A	rs72817599	G	A	G	Sox2_MA0143.3	8	0	+	0	0	.
chr5	165208890	165208891	chr5:165208891:C:G	rs17391889	C	G	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr5	165208920	165208921	chr5:165208921:C:A	rs74894976	C	A	C	Sox2_MA0143.3	26	0	+	0	0	.
chr5	165218707	165218708	chr5:165218708:A:G	rs885477	A	G	A	Sox2_MA0143.3	4	1	-	3.5547341015215945	-3.3540206777936254	CCTTTGTA
chr5	165397619	165397620	chr5:165397620:C:T	rs72805728	C	T	C	Sox2_MA0143.3	15	0	-	0	0	.
chr5	165474773	165474774	chr5:165474774:A:C	rs72813337	A	C	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr5	165521817	165521818	chr5:165521818:A:G	rs9314071	A	G	A	Sox2_MA0143.3	20	0	+	0	0	.
chr5	165623259	165623260	chr5:165623260:C:T	rs11954996	C	T	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr5	165682462	165682463	chr5:165682463:G:A	rs262701	G	A	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr5	165760669	165760670	chr5:165760670:T:C	rs62383600	T	C	c	Sox2_MA0143.3	2	1	-	9.613475778572903	3.494828071296623	CCATTGTT
chr5	165760672	165760673	chr5:165760673:C:T	rs11135386	C	T	t	Sox2_MA0143.3	-1	0	-	0	0	.
chr5	165885968	165885969	chr5:165885969:T:A	chr5:165885969:T:A	T	A	T	Sox2_MA0143.3	2	1	+	8.864090315184848	8.676919043985553	CCTTTGTG
chr5	166087311	166087312	chr5:166087312:G:A	rs2545521	G	A	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr5	166369493	166369494	chr5:166369494:G:A	rs1696964	G	A	A	Sox2_MA0143.3	23	0	+	0	0	.
chr5	166371315	166371316	chr5:166371316:G:A	rs17066756	G	A	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr5	166408500	166408501	chr5:166408501:G:A	rs1696924	G	A	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr5	166423044	166423045	chr5:166423045:T:A	rs350924	T	A	A	Sox2_MA0143.3	14	0	+	0	0	.
chr5	166650200	166650201	chr5:166650201:G:A	rs347980	G	A	G	Sox2_MA0143.3	8	0	-	0	0	.
chr5	166687164	166687165	chr5:166687165:T:G	rs67018742	T	G	T	Sox2_MA0143.3	-4	0	-	0	0	.
chr5	167017081	167017082	chr5:167017082:C:T	rs1501795	C	T	T	Sox2_MA0143.3	-1	0	+	0	0	.
chr5	167347386	167347387	chr5:167347387:G:A	rs75143066	G	A	g	Sox2_MA0143.3	0	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr5	167642582	167642583	chr5:167642583:A:G	rs775016465	A	G	A	Sox2_MA0143.3	-17	0	+	0	0	.
chr5	167652255	167652256	chr5:167652256:C:T	rs77878541	C	T	T	Sox2_MA0143.3	-19	0	+	0	0	.
chr5	167832827	167832828	chr5:167832828:A:G	rs13436078	A	G	A	Sox2_MA0143.3	9	0	+	0	0	.
chr5	167924646	167924647	chr5:167924647:A:G	rs39950	A	G	a	Sox2_MA0143.3	13	0	+	0	0	.
chr5	168047468	168047469	chr5:168047469:A:G	rs114898031	A	G	A	Sox2_MA0143.3	21	0	-	0	0	.
chr5	168169164	168169165	chr5:168169165:C:T	rs13176788	C	T	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr5	168186730	168186731	chr5:168186731:C:T	rs567388796	C	T	C	Sox2_MA0143.3	23	0	+	0	0	.
chr5	168194111	168194112	chr5:168194112:G:C	rs1874462	G	C	C	Sox2_MA0143.3	9	0	-	0	0	.
chr5	168194114	168194115	chr5:168194115:A:G	rs1874461	A	G	G	Sox2_MA0143.3	6	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr5	168273699	168273700	chr5:168273700:T:C	rs62385597	T	C	T	Sox2_MA0143.3	-5	0	-	0	0	.
chr5	168291054	168291055	chr5:168291055:T:A	rs72838318	T	A	T	Sox2_MA0143.3	2	1	-	9.613475778572903	9.800647049772198	CCATTGTT
chr5	168404627	168404628	chr5:168404628:G:T	rs4976549	G	T	G	Sox2_MA0143.3	19	0	-	0	0	.
chr5	168441924	168441925	chr5:168441925:G:A	rs3948557	G	A	A	Sox2_MA0143.3	20	0	-	0	0	.
chr5	168450921	168450922	chr5:168450922:G:A	rs13158279	G	A	G	Sox2_MA0143.3	22	0	-	0	0	.
chr5	168450953	168450954	chr5:168450954:G:T	rs4976611	G	T	T	Sox2_MA0143.3	-10	0	-	0	0	.
chr5	168450962	168450963	chr5:168450963:C:T	rs4976555	C	T	T	Sox2_MA0143.3	-19	0	-	0	0	.
chr5	168532301	168532302	chr5:168532302:C:G	rs244895	C	G	G	Sox2_MA0143.3	27	0	-	0	0	.
chr5	168578497	168578498	chr5:168578498:T:G	chr5:168578498:T:G	T	G	T	Sox2_MA0143.3	-6	0	-	0	0	.
chr5	168580096	168580097	chr5:168580097:C:T	rs529339719	C	T	C	Sox2_MA0143.3	-5	0	-	0	0	.
chr5	168592066	168592067	chr5:168592067:G:A	rs11739339	G	A	G	Sox2_MA0143.3	17	0	+	0	0	.
chr5	168647109	168647110	chr5:168647110:G:A	rs572789058	G	A	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr5	168647149	168647150	chr5:168647150:A:G	rs116408736	A	G	G	Sox2_MA0143.3	20	0	+	0	0	.
chr5	168754283	168754284	chr5:168754284:G:A	rs870724	G	A	A	Sox2_MA0143.3	8	0	-	0	0	.
chr5	168761674	168761675	chr5:168761675:G:A	rs17070430	G	A	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr5	168797062	168797063	chr5:168797063:C:T	rs143652220	C	T	C	Sox2_MA0143.3	24	0	+	0	0	.
chr5	168799100	168799101	chr5:168799101:A:G	rs11949966	A	G	A	Sox2_MA0143.3	17	0	+	0	0	.
chr5	168802723	168802724	chr5:168802724:T:C	rs73805229	T	C	T	Sox2_MA0143.3	3	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr5	168834343	168834344	chr5:168834344:A:G	rs7711067	A	G	G	Sox2_MA0143.3	25	0	+	0	0	.
chr5	168856807	168856808	chr5:168856808:C:T	rs2974423	C	T	T	Sox2_MA0143.3	-14	0	+	0	0	.
chr5	168869907	168869908	chr5:168869908:A:G	rs966731126	A	G	A	Sox2_MA0143.3	13	0	-	0	0	.
chr5	168917055	168917056	chr5:168917056:C:T	rs72829606	C	T	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr5	168968534	168968535	chr5:168968535:T:C	rs62377235	T	C	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr5	169105131	169105132	chr5:169105132:A:G	rs295995	A	G	A	Sox2_MA0143.3	-12	0	+	0	0	.
chr5	169129140	169129141	chr5:169129141:G:A	rs111625252	G	A	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr5	169129154	169129155	chr5:169129155:T:C	rs80055808	T	C	T	Sox2_MA0143.3	8	0	+	0	0	.
chr5	169143890	169143891	chr5:169143891:G:A	rs2161115	G	A	G	Sox2_MA0143.3	1	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr5	169144299	169144300	chr5:169144300:C:T	rs297836	C	T	T	Sox2_MA0143.3	-19	0	+	0	0	.
chr5	169166199	169166200	chr5:169166200:G:A	rs17637230	G	A	G	Sox2_MA0143.3	16	0	+	0	0	.
chr5	169173450	169173451	chr5:169173451:C:T	rs4868339	C	T	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr5	169222809	169222810	chr5:169222810:C:T	rs112675856	C	T	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr5	169265877	169265878	chr5:169265878:A:T	rs35820571	A	T	T	Sox2_MA0143.3	-12	0	-	0	0	.
chr5	169273297	169273298	chr5:169273298:T:C	rs888784	T	C	T	Sox2_MA0143.3	-18	0	+	0	0	.
chr5	169429282	169429283	chr5:169429283:T:C	rs148914276	T	C	T	Sox2_MA0143.3	12	0	-	0	0	.
chr5	169431530	169431531	chr5:169431531:A:C	rs6555863	A	C	C	Sox2_MA0143.3	13	0	-	0	0	.
chr5	169653567	169653568	chr5:169653568:C:T	rs112548886	C	T	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr5	169801414	169801415	chr5:169801415:C:T	rs369522790	C	T	T	Sox2_MA0143.3	23	0	+	0	0	.
chr5	169874018	169874019	chr5:169874019:A:G	rs570259704	A	G	A	Sox2_MA0143.3	6	1	-	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr5	169874023	169874024	chr5:169874024:G:A	rs72842510	G	A	G	Sox2_MA0143.3	1	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr5	169945814	169945815	chr5:169945815:C:T	rs79272032	C	T	T	Sox2_MA0143.3	-16	0	+	0	0	.
chr5	169960865	169960866	chr5:169960866:C:T	rs77478722	C	T	C	Sox2_MA0143.3	7	1	+	9.206767037375712	9.800647049772198	CCTTTGTC
chr5	169974391	169974392	chr5:169974392:T:C	rs6869158	T	C	C	Sox2_MA0143.3	2	1	+	9.800647049772198	3.494828071296623	CCTTTGTT
chr5	169980892	169980893	chr5:169980893:G:A	rs57606998	G	A	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr5	169980904	169980905	chr5:169980905:A:T	rs77234896	A	T	A	Sox2_MA0143.3	2	1	+	9.019595766176417	9.206767037375712	CCATTGTC
chr5	170076435	170076436	chr5:170076436:G:A	rs10866644	G	A	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr5	170211729	170211730	chr5:170211730:A:G	rs79216999	A	G	A	Sox2_MA0143.3	9	0	+	0	0	.
chr5	170273347	170273348	chr5:170273348:G:A	rs315741	G	A	A	Sox2_MA0143.3	11	0	+	0	0	.
chr5	170285986	170285987	chr5:170285987:G:A	rs541154233	G	A	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr5	170286015	170286016	chr5:170286016:G:A	rs111312424	G	A	G	Sox2_MA0143.3	19	0	+	0	0	.
chr5	170288954	170288955	chr5:170288955:A:G	rs147092039	A	G	A	Sox2_MA0143.3	17	0	-	0	0	.
chr5	170293719	170293720	chr5:170293720:T:G	rs185171391	T	G	T	Sox2_MA0143.3	27	0	+	0	0	.
chr5	170308431	170308432	chr5:170308432:T:C	rs315788	T	C	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr5	170315588	170315589	chr5:170315589:T:C	rs876315	T	C	T	Sox2_MA0143.3	24	0	-	0	0	.
chr5	170340168	170340169	chr5:170340169:G:T	rs315762	G	T	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr5	170340178	170340179	chr5:170340179:G:C	rs58631137	G	C	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr5	170342864	170342865	chr5:170342865:T:C	rs7713802	T	C	T	Sox2_MA0143.3	26	0	-	0	0	.
chr5	170342866	170342867	chr5:170342867:T:A	rs7713803	T	A	T	Sox2_MA0143.3	24	0	-	0	0	.
chr5	170467411	170467412	chr5:170467412:T:C	rs10077001	T	C	T	Sox2_MA0143.3	24	0	-	0	0	.
chr5	170486248	170486249	chr5:170486249:C:T	rs10056890	C	T	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr5	170539664	170539665	chr5:170539665:G:A	rs2112601	G	A	A	Sox2_MA0143.3	11	0	+	0	0	.
chr5	170571736	170571737	chr5:170571737:T:C	rs148853385	T	C	T	Sox2_MA0143.3	-15	0	-	0	0	.
chr5	170630598	170630599	chr5:170630599:A:C	rs35115663	A	C	A	Sox2_MA0143.3	-3	0	-	0	0	.
chr5	170755727	170755728	chr5:170755728:G:A	rs113490439	G	A	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr5	170781510	170781511	chr5:170781511:C:T	rs7715967	C	T	c	Sox2_MA0143.3	12	0	+	0	0	.
chr5	170820131	170820132	chr5:170820132:C:T	rs138058426	C	T	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr5	170863243	170863244	chr5:170863244:G:C	rs10064208	G	C	C	Sox2_MA0143.3	19	0	-	0	0	.
chr5	171364119	171364120	chr5:171364120:A:C	rs182302089	A	C	A	Sox2_MA0143.3	6	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr5	171589949	171589950	chr5:171589950:A:G	rs11950887	A	G	A	Sox2_MA0143.3	2	1	+	9.613475778572903	3.494828071296623	CCATTGTT
chr5	171674889	171674890	chr5:171674890:T:C	rs257365	T	C	T	Sox2_MA0143.3	-2	0	+	0	0	.
chr5	171724226	171724227	chr5:171724227:T:C	rs10516089	T	C	T	Sox2_MA0143.3	-11	0	-	0	0	.
chr5	171797398	171797399	chr5:171797399:A:G	rs254963	A	G	G	Sox2_MA0143.3	25	0	+	0	0	.
chr5	171806283	171806284	chr5:171806284:A:C	rs6863650	A	C	A	Sox2_MA0143.3	25	0	-	0	0	.
chr5	171840347	171840348	chr5:171840348:T:G	rs75312526	T	G	T	Sox2_MA0143.3	-4	0	-	0	0	.
chr5	171916570	171916571	chr5:171916571:A:C	rs77310504	A	C	A	Sox2_MA0143.3	-13	0	-	0	0	.
chr5	172048684	172048685	chr5:172048685:G:T	rs10035578	G	T	T	Sox2_MA0143.3	-7	0	-	0	0	.
chr5	172077002	172077003	chr5:172077003:G:A	rs113518990	G	A	G	Sox2_MA0143.3	26	0	-	0	0	.
chr5	172103356	172103357	chr5:172103357:A:G	chr5:172103357:A:G	A	G	A	Sox2_MA0143.3	13	0	+	0	0	.
chr5	172107225	172107226	chr5:172107226:A:C	rs112458328	A	C	A	Sox2_MA0143.3	23	0	-	0	0	.
chr5	172107262	172107263	chr5:172107263:T:C	rs143173082	T	C	T	Sox2_MA0143.3	-14	0	-	0	0	.
chr5	172145145	172145146	chr5:172145146:G:A	rs144416304	G	A	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr5	172283542	172283543	chr5:172283543:G:A	rs546679640	G	A	G	Sox2_MA0143.3	20	0	-	0	0	.
chr5	172283547	172283548	chr5:172283548:T:G	chr5:172283548:T:G	T	G	T	Sox2_MA0143.3	15	0	-	0	0	.
chr5	172303412	172303413	chr5:172303413:A:G	rs80236844	A	G	A	Sox2_MA0143.3	16	0	-	0	0	.
chr5	172399581	172399582	chr5:172399582:A:G	rs11134746	A	G	A	Sox2_MA0143.3	4	1	-	8.676919043985553	1.7681642646703322	CCATTGTG
chr5	172403305	172403306	chr5:172403306:C:G	chr5:172403306:C:G	C	G	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr5	172403305	172403306	chr5:172403306:C:T	rs1031019603	C	T	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr5	172403318	172403319	chr5:172403319:A:T	rs751590002	A	T	A	Sox2_MA0143.3	11	0	+	0	0	.
chr5	172414578	172414579	chr5:172414579:T:C	rs10078237	T	C	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr5	172430203	172430204	chr5:172430204:C:G	rs2569213	C	G	C	Sox2_MA0143.3	15	0	-	0	0	.
chr5	172509520	172509521	chr5:172509521:T:C	rs147648448	T	C	T	Sox2_MA0143.3	-17	0	-	0	0	.
chr5	172520471	172520472	chr5:172520472:G:A	rs2163792	G	A	G	Sox2_MA0143.3	25	0	-	0	0	.
chr5	172540772	172540773	chr5:172540773:T:C	rs17705749	T	C	T	Sox2_MA0143.3	13	0	-	0	0	.
chr5	172540779	172540780	chr5:172540780:A:G	rs17074876	A	G	G	Sox2_MA0143.3	6	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr5	172568460	172568461	chr5:172568461:C:A	rs114110802	C	A	C	Sox2_MA0143.3	20	0	+	0	0	.
chr5	172576930	172576931	chr5:172576931:G:A	rs9313600	G	A	G	Sox2_MA0143.3	11	0	-	0	0	.
chr5	172577135	172577136	chr5:172577136:C:T	rs10063780	C	T	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr5	172603674	172603675	chr5:172603675:C:T	rs17075006	C	T	C	Sox2_MA0143.3	-5	0	-	0	0	.
chr5	172603678	172603679	chr5:172603679:G:A	rs912966148	G	A	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr5	172609328	172609329	chr5:172609329:T:C	rs4867681	T	C	t	Sox2_MA0143.3	4	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr5	172641713	172641714	chr5:172641714:C:A	chr5:172641714:C:A	C	A	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr5	172641719	172641720	chr5:172641720:G:T	rs1189175723	G	T	G	Sox2_MA0143.3	-9	0	+	0	0	.
chr5	172658806	172658807	chr5:172658807:G:A	rs77414237	G	A	G	Sox2_MA0143.3	-3	0	+	0	0	.
chr5	172700656	172700657	chr5:172700657:C:T	rs78705349	C	T	C	Sox2_MA0143.3	12	0	+	0	0	.
chr5	172749882	172749883	chr5:172749883:C:T	rs2161374	C	T	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr5	172749900	172749901	chr5:172749901:C:T	rs2161375	C	T	C	Sox2_MA0143.3	-20	0	-	0	0	.
chr5	172749929	172749930	chr5:172749930:G:A	rs6896613	G	A	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr5	172772362	172772363	chr5:172772363:G:A	rs13184134	G	A	G	Sox2_MA0143.3	11	0	+	0	0	.
chr5	172777625	172777626	chr5:172777626:C:T	rs4868204	C	T	C	Sox2_MA0143.3	5	1	-	9.613475778572903	2.7047209992576837	CCATTGTT
chr5	172777642	172777643	chr5:172777643:A:C	rs1046349525	A	C	A	Sox2_MA0143.3	-12	0	-	0	0	.
chr5	172791095	172791096	chr5:172791096:G:A	rs17715237	G	A	A	Sox2_MA0143.3	-12	0	-	0	0	.
chr5	172835084	172835085	chr5:172835085:A:G	rs1031908568	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr5	172846400	172846401	chr5:172846401:G:T	rs75800595	G	T	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr5	172848335	172848336	chr5:172848336:G:A	rs79041692	G	A	G	Sox2_MA0143.3	10	0	+	0	0	.
chr5	172887472	172887473	chr5:172887473:C:G	rs28369228	C	G	G	Sox2_MA0143.3	23	0	-	0	0	.
chr5	172887476	172887477	chr5:172887477:T:C	rs79682449	T	C	T	Sox2_MA0143.3	19	0	-	0	0	.
chr5	172959755	172959756	chr5:172959756:A:G	rs540042321	A	G	A	Sox2_MA0143.3	-15	0	+	0	0	.
chr5	172959854	172959855	chr5:172959855:C:T	rs189725081	C	T	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr5	173004577	173004578	chr5:173004578:C:T	rs522133	C	T	C	Sox2_MA0143.3	9	0	+	0	0	.
chr5	173010265	173010266	chr5:173010266:C:A	rs79026487	C	A	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr5	173103557	173103558	chr5:173103558:T:C	rs793356	T	C	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr5	173243240	173243241	chr5:173243241:A:G	rs77664022	A	G	A	Sox2_MA0143.3	-16	0	-	0	0	.
chr5	173243243	173243244	chr5:173243244:C:A	rs869236	C	A	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr5	173252527	173252528	chr5:173252528:C:T	rs555921075	C	T	C	Sox2_MA0143.3	19	0	-	0	0	.
chr5	173265519	173265520	chr5:173265520:A:C	rs7726967	A	C	A	Sox2_MA0143.3	-13	0	+	0	0	.
chr5	173290567	173290568	chr5:173290568:G:A	rs141383268	G	A	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr5	173310848	173310849	chr5:173310849:G:A	rs73804143	G	A	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr5	173322309	173322310	chr5:173322310:C:A	rs7734967	C	A	C	Sox2_MA0143.3	26	0	+	0	0	.
chr5	173341775	173341776	chr5:173341776:C:T	rs79372650	C	T	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr5	173350731	173350732	chr5:173350732:A:G	rs1596785	A	G	A	Sox2_MA0143.3	-5	0	-	0	0	.
chr5	173350734	173350735	chr5:173350735:G:A	rs1596786	G	A	A	Sox2_MA0143.3	-8	0	-	0	0	.
chr5	173372972	173372973	chr5:173372973:G:T	rs73804182	G	T	T	Sox2_MA0143.3	-2	0	-	0	0	.
chr5	173391057	173391058	chr5:173391058:G:A	rs10061327	G	A	G	Sox2_MA0143.3	18	0	+	0	0	.
chr5	173412603	173412604	chr5:173412604:C:T	rs114802756	C	T	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr5	173439329	173439330	chr5:173439330:A:C	rs12187610	A	C	A	Sox2_MA0143.3	21	0	+	0	0	.
chr5	173533408	173533409	chr5:173533409:T:G	rs4867714	T	G	G	Sox2_MA0143.3	22	0	+	0	0	.
chr5	173563488	173563489	chr5:173563489:T:C	rs13183901	T	C	T	Sox2_MA0143.3	16	0	-	0	0	.
chr5	173592247	173592248	chr5:173592248:A:G	rs11959547	A	G	A	Sox2_MA0143.3	24	0	+	0	0	.
chr5	173733656	173733657	chr5:173733657:T:C	rs10071951	T	C	T	Sox2_MA0143.3	6	1	+	8.676919043985553	1.7681642646703326	CCATTGTG
chr5	173764683	173764684	chr5:173764684:G:A	chr5:173764684:G:A	G	A	T	Sox2_MA0143.3	-18	0	+	0	0	.
chr5	173764683	173764684	chr5:173764684:G:T	rs13164950	G	T	T	Sox2_MA0143.3	-18	0	+	0	0	.
chr5	173766480	173766481	chr5:173766481:T:G	rs150333044	T	G	T	Sox2_MA0143.3	27	0	-	0	0	.
chr5	173778314	173778315	chr5:173778315:G:A	rs2594836	G	A	G	Sox2_MA0143.3	15	0	-	0	0	.
chr5	173791180	173791181	chr5:173791181:C:T	rs2594840	C	T	C	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr5	173832485	173832486	chr5:173832486:T:C	rs260870	T	C	T	Sox2_MA0143.3	-19	0	-	0	0	.
chr5	173839019	173839020	chr5:173839020:G:A	rs17076582	G	A	G	Sox2_MA0143.3	-9	0	+	0	0	.
chr5	173853730	173853731	chr5:173853731:G:A	rs768148	G	A	g	Sox2_MA0143.3	-14	0	-	0	0	.
chr5	173918398	173918399	chr5:173918399:C:T	rs1219037899	C	T	C	Sox2_MA0143.3	23	0	-	0	0	.
chr5	173918405	173918406	chr5:173918406:G:T	rs17695328	G	T	G	Sox2_MA0143.3	16	0	-	0	0	.
chr5	173953591	173953592	chr5:173953592:T:A	rs969519	T	A	A	Sox2_MA0143.3	7	1	+	9.800647049772198	3.5547341015215945	CCTTTGTT
chr5	173965399	173965400	chr5:173965400:A:G	rs6869166	A	G	A	Sox2_MA0143.3	27	0	-	0	0	.
chr5	173973380	173973381	chr5:173973381:G:C	rs59720412	G	C	G	Sox2_MA0143.3	0	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr5	174007404	174007405	chr5:174007405:T:G	rs6556100	T	G	G	Sox2_MA0143.3	-3	0	+	0	0	.
chr5	174047883	174047884	chr5:174047884:T:G	rs17076783	T	G	G	Sox2_MA0143.3	15	0	-	0	0	.
chr5	174064296	174064297	chr5:174064297:G:A	rs17076802	G	A	G	Sox2_MA0143.3	-16	0	-	0	0	.
chr5	174115380	174115381	chr5:174115381:T:A	rs12055038	T	A	A	Sox2_MA0143.3	22	0	+	0	0	.
chr5	174115385	174115386	chr5:174115386:C:T	rs72816712	C	T	T	Sox2_MA0143.3	27	0	+	0	0	.
chr5	174130391	174130392	chr5:174130392:T:A	rs17076873	T	A	a	Sox2_MA0143.3	24	0	-	0	0	.
chr5	174130427	174130428	chr5:174130428:A:G	rs56968250	A	G	g	Sox2_MA0143.3	-12	0	-	0	0	.
chr5	174145914	174145915	chr5:174145915:G:A	chr5:174145915:G:A	G	A	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr5	174156408	174156409	chr5:174156409:A:C	rs1036172	A	C	A	Sox2_MA0143.3	10	0	+	0	0	.
chr5	174225710	174225711	chr5:174225711:A:G	rs356067	A	G	A	Sox2_MA0143.3	27	0	-	0	0	.
chr5	174240022	174240023	chr5:174240023:G:A	rs17077053	G	A	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr5	174247175	174247176	chr5:174247176:A:G	rs55825233	A	G	A	Sox2_MA0143.3	-19	0	-	0	0	.
chr5	174260109	174260110	chr5:174260110:T:C	rs6874197	T	C	T	Sox2_MA0143.3	7	1	+	9.613475778572903	9.019595766176417	CCATTGTT
chr5	174283147	174283148	chr5:174283148:G:T	rs2133736	G	T	G	Sox2_MA0143.3	26	0	+	0	0	.
chr5	174312087	174312088	chr5:174312088:C:G	rs574007241	C	G	C	Sox2_MA0143.3	25	0	-	0	0	.
chr5	174312111	174312112	chr5:174312112:G:A	rs2913518	G	A	G	Sox2_MA0143.3	1	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr5	174410806	174410807	chr5:174410807:T:C	rs149732959	T	C	T	Sox2_MA0143.3	23	0	+	0	0	.
chr5	174412631	174412632	chr5:174412632:C:A	rs13184514	C	A	C	Sox2_MA0143.3	20	0	-	0	0	.
chr5	174524025	174524026	chr5:174524026:A:G	rs13185484	A	G	A	Sox2_MA0143.3	10	0	+	0	0	.
chr5	174532214	174532215	chr5:174532215:T:A	rs2242418	T	A	T	Sox2_MA0143.3	26	0	+	0	0	.
chr5	174589834	174589835	chr5:174589835:C:T	rs80267362	C	T	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr5	174611533	174611534	chr5:174611534:G:T	rs1812351	G	T	T	Sox2_MA0143.3	-11	0	-	0	0	.
chr5	174618328	174618329	chr5:174618329:C:T	rs62394653	C	T	C	Sox2_MA0143.3	25	0	-	0	0	.
chr5	174675774	174675775	chr5:174675775:C:A	rs10044596	C	A	C	Sox2_MA0143.3	20	0	+	0	0	.
chr5	174698388	174698389	chr5:174698389:A:G	rs12515230	A	G	G	Sox2_MA0143.3	9	0	+	0	0	.
chr5	174709425	174709426	chr5:174709426:A:G	rs17063876	A	G	A	Sox2_MA0143.3	18	0	+	0	0	.
chr5	174731782	174731783	chr5:174731783:C:T	rs77652122	C	T	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr5	174760959	174760960	chr5:174760960:C:T	rs1001714962	C	T	C	Sox2_MA0143.3	17	0	+	0	0	.
chr5	174833926	174833927	chr5:174833927:T:C	rs57074555	T	C	T	Sox2_MA0143.3	22	0	-	0	0	.
chr5	174911348	174911349	chr5:174911349:G:A	rs6872302	G	A	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr5	174921328	174921329	chr5:174921329:G:A	rs184542725	G	A	G	Sox2_MA0143.3	23	0	+	0	0	.
chr5	175002081	175002082	chr5:175002082:C:T	rs7728260	C	T	t	Sox2_MA0143.3	10	0	-	0	0	.
chr5	175345118	175345119	chr5:175345119:C:T	rs4349731	C	T	C	Sox2_MA0143.3	14	0	-	0	0	.
chr5	175383535	175383536	chr5:175383536:G:T	rs57719302	G	T	G	Sox2_MA0143.3	1	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr5	175448468	175448469	chr5:175448469:A:G	rs267412	A	G	A	Sox2_MA0143.3	-16	0	+	0	0	.
chr5	175480903	175480904	chr5:175480904:C:A	rs2382026	C	A	C	Sox2_MA0143.3	27	0	-	0	0	.
chr5	175480941	175480942	chr5:175480942:A:G	rs2940478	A	G	A	Sox2_MA0143.3	-11	0	-	0	0	.
chr5	175645910	175645911	chr5:175645911:A:G	rs55790901	A	G	a	Sox2_MA0143.3	15	0	+	0	0	.
chr5	175693551	175693552	chr5:175693552:A:C	rs7710519	A	C	C	Sox2_MA0143.3	23	0	+	0	0	.
chr5	175901938	175901939	chr5:175901939:C:T	rs142633263	C	T	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr5	175921504	175921505	chr5:175921505:C:G	rs871015	C	G	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr5	175940318	175940319	chr5:175940319:C:T	rs1024964	C	T	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr5	176133064	176133065	chr5:176133065:A:G	rs7443789	A	G	.	Sox2_MA0143.3	4	1	-	9.206767037375712	2.2980122580604916	CCTTTGTC
chr5	176133065	176133066	chr5:176133066:A:C	rs7443790	A	C	.	Sox2_MA0143.3	3	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr5	176208691	176208692	chr5:176208692:T:C	rs4868615	T	C	t	Sox2_MA0143.3	-17	0	+	0	0	.
chr5	176345011	176345012	chr5:176345012:C:G	rs417852	C	G	C	Sox2_MA0143.3	5	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr5	176400635	176400636	chr5:176400636:C:T	rs13181024	C	T	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr5	176436885	176436886	chr5:176436886:G:A	rs11743481	G	A	G	Sox2_MA0143.3	-3	0	+	0	0	.
chr5	176536652	176536653	chr5:176536653:G:T	rs760464415	G	T	G	Sox2_MA0143.3	26	0	-	0	0	.
chr5	176536684	176536685	chr5:176536685:G:A	chr5:176536685:G:A	G	A	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr5	176536952	176536953	chr5:176536953:G:A	rs1465284038	G	A	G	Sox2_MA0143.3	-14	0	+	0	0	.
chr5	176574187	176574188	chr5:176574188:G:A	rs1078628	G	A	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr5	176575540	176575541	chr5:176575541:C:T	rs41275281	C	T	C	Sox2_MA0143.3	8	0	-	0	0	.
chr5	176636547	176636548	chr5:176636548:C:G	rs4868672	C	G	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr5	176726959	176726960	chr5:176726960:G:A	rs11134997	G	A	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr5	176823867	176823868	chr5:176823868:G:C	rs114158145	G	C	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr5	176897727	176897728	chr5:176897728:G:C	rs6861925	G	C	C	Sox2_MA0143.3	16	0	-	0	0	.
chr5	176907599	176907600	chr5:176907600:T:G	rs1472920	T	G	T	Sox2_MA0143.3	16	0	+	0	0	.
chr5	177313994	177313995	chr5:177313995:C:A	rs6885410	C	A	C	Sox2_MA0143.3	10	0	-	0	0	.
chr5	177357610	177357611	chr5:177357611:G:A	rs4075959	G	A	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr5	177378125	177378126	chr5:177378126:G:A	chr5:177378126:G:A	G	A	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr5	177390703	177390704	chr5:177390704:C:G	rs187863506	C	G	C	Sox2_MA0143.3	24	0	-	0	0	.
chr5	177394447	177394448	chr5:177394448:A:C	rs6420095	A	C	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr5	177397135	177397136	chr5:177397136:C:G	rs7447593	C	G	G	Sox2_MA0143.3	7	1	-	8.864090315184848	9.206767037375712	CCTTTGTG
chr5	177453431	177453432	chr5:177453432:C:T	rs149528025	C	T	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr5	177485275	177485276	chr5:177485276:G:A	rs335461	G	A	G	Sox2_MA0143.3	27	0	+	0	0	.
chr5	177491468	177491469	chr5:177491469:A:G	rs185691519	A	G	A	Sox2_MA0143.3	-6	0	-	0	0	.
chr5	177582128	177582129	chr5:177582129:T:C	rs391072	T	C	c	Sox2_MA0143.3	-19	0	+	0	0	.
chr5	177926088	177926089	chr5:177926089:G:A	rs72648816	G	A	.	Sox2_MA0143.3	-4	0	-	0	0	.
chr5	177926097	177926098	chr5:177926098:T:C	rs10064624	T	C	.	Sox2_MA0143.3	-13	0	-	0	0	.
chr5	177960838	177960839	chr5:177960839:A:G	rs73339894	A	G	.	Sox2_MA0143.3	4	1	-	8.676919043985553	1.7681642646703322	CCATTGTG
chr5	177961005	177961006	chr5:177961006:C:T	rs73339896	C	T	.	Sox2_MA0143.3	-20	0	+	0	0	.
chr5	177971815	177971816	chr5:177971816:T:C	rs56207434	T	C	.	Sox2_MA0143.3	-17	0	-	0	0	.
chr5	178074662	178074663	chr5:178074663:C:G	rs6601208	C	G	.	Sox2_MA0143.3	1	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr5	178085563	178085564	chr5:178085564:G:A	rs55736529	G	A	.	Sox2_MA0143.3	1	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr5	178225682	178225683	chr5:178225683:T:G	rs10060814	T	G	G	Sox2_MA0143.3	-14	0	+	0	0	.
chr5	178237295	178237296	chr5:178237296:G:A	rs7715762	G	A	A	Sox2_MA0143.3	-1	0	+	0	0	.
chr5	178248262	178248263	chr5:178248263:C:T	rs111363480	C	T	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr5	178286886	178286887	chr5:178286887:G:T	rs2913834	G	T	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr5	178333574	178333575	chr5:178333575:G:A	rs2913791	G	A	N	Sox2_MA0143.3	11	0	+	0	0	.
chr5	178359349	178359350	chr5:178359350:T:A	rs57585321	T	A	t	Sox2_MA0143.3	-6	0	-	0	0	.
chr5	178359360	178359361	chr5:178359361:C:T	rs115401717	C	T	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr5	178370334	178370335	chr5:178370335:C:G	rs2973715	C	G	c	Sox2_MA0143.3	-18	0	-	0	0	.
chr5	178371590	178371591	chr5:178371591:C:A	rs10066760	C	A	c	Sox2_MA0143.3	-16	0	+	0	0	.
chr5	178371610	178371611	chr5:178371611:T:G	rs2973716	T	G	g	Sox2_MA0143.3	4	1	+	8.864090315184848	1.9553355358696274	CCTTTGTG
chr5	178376494	178376495	chr5:178376495:T:C	rs10035700	T	C	t	Sox2_MA0143.3	26	0	-	0	0	.
chr5	178436573	178436574	chr5:178436574:C:T	rs6882668	C	T	.	Sox2_MA0143.3	17	0	+	0	0	.
chr5	178463076	178463077	chr5:178463077:C:G	chr5:178463077:C:G	C	G	C	Sox2_MA0143.3	22	0	-	0	0	.
chr5	178467574	178467575	chr5:178467575:T:C	rs115392728	T	C	t	Sox2_MA0143.3	6	1	+	8.676919043985553	1.7681642646703326	CCATTGTG
chr5	178467891	178467892	chr5:178467892:C:T	rs1171485519	C	T	C	Sox2_MA0143.3	20	0	-	0	0	.
chr5	178467902	178467903	chr5:178467903:G:C	rs1546222	G	C	G	Sox2_MA0143.3	9	0	-	0	0	.
chr5	178488408	178488409	chr5:178488409:T:G	rs4976731	T	G	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr5	178488426	178488427	chr5:178488427:C:T	rs7730172	C	T	C	Sox2_MA0143.3	0	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr5	178492580	178492581	chr5:178492581:C:A	rs12518108	C	A	C	Sox2_MA0143.3	5	1	-	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr5	178645227	178645228	chr5:178645228:C:T	rs3925518	C	T	T	Sox2_MA0143.3	9	0	+	0	0	.
chr5	178655839	178655840	chr5:178655840:G:A	rs11740396	G	A	A	Sox2_MA0143.3	13	0	-	0	0	.
chr5	178669775	178669776	chr5:178669776:G:A	rs4626352	G	A	G	Sox2_MA0143.3	21	0	-	0	0	.
chr5	178669906	178669907	chr5:178669907:C:T	rs11249561	C	T	c	Sox2_MA0143.3	22	0	-	0	0	.
chr5	178669935	178669936	chr5:178669936:C:G	rs11249562	C	G	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr5	178989825	178989826	chr5:178989826:G:A	rs762725	G	A	G	Sox2_MA0143.3	27	0	-	0	0	.
chr5	179117286	179117287	chr5:179117287:C:T	rs774602367	C	T	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr5	179121866	179121867	chr5:179121867:T:C	rs184809731	T	C	T	Sox2_MA0143.3	17	0	-	0	0	.
chr5	179182058	179182059	chr5:179182059:T:C	rs3797600	T	C	T	Sox2_MA0143.3	22	0	+	0	0	.
chr5	179232637	179232638	chr5:179232638:G:A	rs11739530	G	A	G	Sox2_MA0143.3	11	0	-	0	0	.
chr5	179235300	179235301	chr5:179235301:T:G	rs113960013	T	G	T	Sox2_MA0143.3	11	0	-	0	0	.
chr5	179257259	179257260	chr5:179257260:T:C	rs461542	T	C	C	Sox2_MA0143.3	10	0	-	0	0	.
chr5	179311435	179311436	chr5:179311436:A:G	rs62395029	A	G	A	Sox2_MA0143.3	19	0	-	0	0	.
chr5	179326035	179326036	chr5:179326036:C:T	rs72648842	C	T	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr5	179338109	179338110	chr5:179338110:C:G	rs7727979	C	G	C	Sox2_MA0143.3	14	0	-	0	0	.
chr5	179338136	179338137	chr5:179338137:T:C	rs33900	T	C	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr5	179420532	179420533	chr5:179420533:T:C	rs4235514	T	C	C	Sox2_MA0143.3	4	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr5	179500755	179500756	chr5:179500756:G:A	rs73809239	G	A	g	Sox2_MA0143.3	-7	0	+	0	0	.
chr5	179527342	179527343	chr5:179527343:C:A	rs74740683	C	A	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr5	179549894	179549895	chr5:179549895:T:G	rs116050524	T	G	T	Sox2_MA0143.3	18	0	+	0	0	.
chr5	179613957	179613958	chr5:179613958:G:A	rs148475834	G	A	G	Sox2_MA0143.3	27	0	+	0	0	.
chr5	179632570	179632571	chr5:179632571:C:G	rs28571858	C	G	c	Sox2_MA0143.3	-20	0	-	0	0	.
chr5	179732856	179732857	chr5:179732857:G:A	rs913385508	G	A	G	Sox2_MA0143.3	22	0	-	0	0	.
chr5	179732868	179732869	chr5:179732869:G:A	rs529692246	G	A	G	Sox2_MA0143.3	10	0	-	0	0	.
chr5	179759235	179759236	chr5:179759236:A:G	rs6887507	A	G	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr5	179768588	179768589	chr5:179768589:C:T	rs75697540	C	T	T	Sox2_MA0143.3	-12	0	+	0	0	.
chr5	179768589	179768590	chr5:179768590:G:A	rs57463529	G	A	G	Sox2_MA0143.3	-11	0	+	0	0	.
chr5	179800285	179800286	chr5:179800286:G:T	rs166624	G	T	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr5	179907051	179907052	chr5:179907052:G:C	rs155797	G	C	G	Sox2_MA0143.3	25	0	-	0	0	.
chr5	179907060	179907061	chr5:179907061:A:C	rs537526485	A	C	A	Sox2_MA0143.3	16	0	-	0	0	.
chr5	179946398	179946399	chr5:179946399:T:G	rs248332	T	G	T	Sox2_MA0143.3	15	0	-	0	0	.
chr5	180071153	180071154	chr5:180071154:C:G	chr5:180071154:C:G	C	G	C	Sox2_MA0143.3	0	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr5	180072383	180072384	chr5:180072384:C:G	rs77617244	C	G	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr5	180121987	180121988	chr5:180121988:G:A	rs142447851	G	A	G	Sox2_MA0143.3	8	0	-	0	0	.
chr5	180127601	180127602	chr5:180127602:C:T	rs57288534	C	T	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr5	180130155	180130156	chr5:180130156:C:A	rs11249671	C	A	A	Sox2_MA0143.3	1	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr5	180133136	180133137	chr5:180133137:G:A	rs12515237	G	A	G	Sox2_MA0143.3	27	0	-	0	0	.
chr5	180201618	180201619	chr5:180201619:A:G	rs35222329	A	G	A	Sox2_MA0143.3	-5	0	-	0	0	.
chr5	180245054	180245055	chr5:180245055:C:T	rs550751671	C	T	C	Sox2_MA0143.3	8	0	+	0	0	.
chr5	180282153	180282154	chr5:180282154:T:C	rs3812067	T	C	.	Sox2_MA0143.3	-17	0	+	0	0	.
chr5	180336397	180336398	chr5:180336398:T:G	rs6891083	T	G	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr5	180367980	180367981	chr5:180367981:T:A	rs13356553	T	A	A	Sox2_MA0143.3	-10	0	+	0	0	.
chr5	180370404	180370405	chr5:180370405:G:A	rs78006337	G	A	G	Sox2_MA0143.3	25	0	-	0	0	.
chr5	180438814	180438815	chr5:180438815:A:C	rs28635772	A	C	A	Sox2_MA0143.3	-20	0	+	0	0	.
chr5	180465801	180465802	chr5:180465802:C:A	rs62405475	C	A	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr5	180491721	180491722	chr5:180491722:G:T	rs6875637	G	T	G	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr5	180491741	180491742	chr5:180491742:G:A	rs77925151	G	A	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr5	180562870	180562871	chr5:180562871:T:C	rs79001601	T	C	T	Sox2_MA0143.3	-14	0	-	0	0	.
chr5	180594098	180594099	chr5:180594099:T:C	rs10053714	T	C	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr5	180599586	180599587	chr5:180599587:A:T	rs77562220	A	T	A	Sox2_MA0143.3	26	0	-	0	0	.
chr5	180599620	180599621	chr5:180599621:C:T	rs571477720	C	T	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr5	180783064	180783065	chr5:180783065:G:A	rs115233472	G	A	G	Sox2_MA0143.3	18	0	+	0	0	.
chr5	180820307	180820308	chr5:180820308:T:C	rs115227761	T	C	T	Sox2_MA0143.3	11	0	-	0	0	.
chr5	181050448	181050449	chr5:181050449:C:G	rs7702426	C	G	c	Sox2_MA0143.3	7	1	-	8.676919043985553	9.019595766176417	CCATTGTG
chr5	181104623	181104624	chr5:181104624:C:A	rs11738381	C	A	N	Sox2_MA0143.3	15	0	-	0	0	.
chr5	181136935	181136936	chr5:181136936:T:C	rs11954960	T	C	c	Sox2_MA0143.3	-5	0	-	0	0	.
chr5	181207108	181207109	chr5:181207109:T:A	rs956117704	T	A	A	Sox2_MA0143.3	22	0	+	0	0	.
chr5	181235560	181235561	chr5:181235561:T:C	rs114518255	T	C	T	Sox2_MA0143.3	6	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr5	181237129	181237130	chr5:181237130:C:T	rs536355545	C	T	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr5	181243554	181243555	chr5:181243555:A:T	rs531179975	A	T	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr6	187383	187384	chr6:187384:G:T	rs371306108	G	T	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr6	190043	190044	chr6:190044:C:A	rs6596815	C	A	C	Sox2_MA0143.3	11	0	+	0	0	.
chr6	227410	227411	chr6:227411:A:G	chr6:227411:A:G	A	G	A	Sox2_MA0143.3	12	0	-	0	0	.
chr6	319616	319617	chr6:319617:C:T	rs141878021	C	T	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr6	335423	335424	chr6:335424:C:T	rs73717035	C	T	c	Sox2_MA0143.3	5	1	-	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr6	357107	357108	chr6:357108:G:A	rs370555601	G	A	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr6	362094	362095	chr6:362095:C:T	rs111326975	C	T	C	Sox2_MA0143.3	10	0	+	0	0	.
chr6	376501	376502	chr6:376502:G:A	rs115583792	G	A	.	Sox2_MA0143.3	12	0	-	0	0	.
chr6	386932	386933	chr6:386933:G:A	rs74758148	G	A	G	Sox2_MA0143.3	19	0	+	0	0	.
chr6	425572	425573	chr6:425573:C:T	rs6916402	C	T	T	Sox2_MA0143.3	-16	0	-	0	0	.
chr6	434716	434717	chr6:434717:T:C	rs73381026	T	C	T	Sox2_MA0143.3	2	1	-	9.613475778572903	3.494828071296623	CCATTGTT
chr6	435027	435028	chr6:435028:G:C	rs112726041	G	C	G	Sox2_MA0143.3	5	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr6	475516	475517	chr6:475517:A:G	rs1877773	A	G	A	Sox2_MA0143.3	-17	0	+	0	0	.
chr6	583840	583841	chr6:583841:G:A	rs186361492	G	A	G	Sox2_MA0143.3	10	0	-	0	0	.
chr6	600358	600359	chr6:600359:C:T	rs7748249	C	T	T	Sox2_MA0143.3	5	1	-	8.676919043985553	1.7681642646703324	CCATTGTG
chr6	600365	600366	chr6:600366:G:A	rs7771367	G	A	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr6	660240	660241	chr6:660241:T:C	rs140831144	T	C	T	Sox2_MA0143.3	-11	0	-	0	0	.
chr6	715195	715196	chr6:715196:G:A	rs2804737	G	A	G	Sox2_MA0143.3	-5	0	+	0	0	.
chr6	797697	797698	chr6:797698:C:G	rs17253478	C	G	C	Sox2_MA0143.3	17	0	-	0	0	.
chr6	797707	797708	chr6:797708:C:T	rs113068097	C	T	C	Sox2_MA0143.3	7	1	-	8.676919043985553	3.3675628303222993	CCATTGTG
chr6	797724	797725	chr6:797725:A:C	rs6929884	A	C	A	Sox2_MA0143.3	-10	0	-	0	0	.
chr6	890164	890165	chr6:890165:C:T	rs4532481	C	T	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr6	922565	922566	chr6:922566:G:T	rs2145914	G	T	G	Sox2_MA0143.3	25	0	-	0	0	.
chr6	922571	922572	chr6:922572:C:T	rs2145913	C	T	C	Sox2_MA0143.3	19	0	-	0	0	.
chr6	1216322	1216323	chr6:1216323:G:T	rs4959529	G	T	G	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr6	1316215	1316216	chr6:1316216:G:A	rs2006798	G	A	G	Sox2_MA0143.3	18	0	-	0	0	.
chr6	1334119	1334120	chr6:1334120:A:G	rs7739076	A	G	A	Sox2_MA0143.3	-11	0	-	0	0	.
chr6	1436998	1436999	chr6:1436999:T:C	rs9502926	T	C	T	Sox2_MA0143.3	-10	0	-	0	0	.
chr6	1462604	1462605	chr6:1462605:G:A	rs2816270	G	A	A	Sox2_MA0143.3	27	0	+	0	0	.
chr6	1478491	1478492	chr6:1478492:A:G	rs62644457	A	G	-	Sox2_MA0143.3	4	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr6	1489684	1489685	chr6:1489685:C:T	rs6934822	C	T	C	Sox2_MA0143.3	24	0	+	0	0	.
chr6	1519504	1519505	chr6:1519505:T:C	rs57756311	T	C	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr6	1519510	1519511	chr6:1519511:A:T	rs57770600	A	T	T	Sox2_MA0143.3	-14	0	+	0	0	.
chr6	1538300	1538301	chr6:1538301:G:T	rs6940870	G	T	G	Sox2_MA0143.3	21	0	+	0	0	.
chr6	1554088	1554089	chr6:1554089:A:T	rs9391923	A	T	A	Sox2_MA0143.3	-7	0	+	0	0	.
chr6	1574704	1574705	chr6:1574705:C:T	rs12665773	C	T	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr6	1574909	1574910	chr6:1574910:C:T	rs75845622	C	T	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr6	1601377	1601378	chr6:1601378:G:A	rs1174438838	G	A	G	Sox2_MA0143.3	21	0	+	0	0	.
chr6	1617887	1617888	chr6:1617888:C:T	rs71550080	C	T	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr6	1628436	1628437	chr6:1628437:T:C	rs4959584	T	C	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr6	1781805	1781806	chr6:1781806:C:T	rs3823271	C	T	T	Sox2_MA0143.3	16	0	+	0	0	.
chr6	1885868	1885869	chr6:1885869:G:A	rs7744168	G	A	G	Sox2_MA0143.3	13	0	-	0	0	.
chr6	1949863	1949864	chr6:1949864:C:T	rs79536868	C	T	C	Sox2_MA0143.3	14	0	-	0	0	.
chr6	1989056	1989057	chr6:1989057:A:T	rs11758621	A	T	A	Sox2_MA0143.3	12	0	-	0	0	.
chr6	2028002	2028003	chr6:2028003:A:G	rs9392354	A	G	A	Sox2_MA0143.3	-17	0	-	0	0	.
chr6	2118322	2118323	chr6:2118323:T:C	rs558687933	T	C	T	Sox2_MA0143.3	-6	0	+	0	0	.
chr6	2197756	2197757	chr6:2197757:C:T	rs234943	C	T	c	Sox2_MA0143.3	21	0	-	0	0	.
chr6	2225672	2225673	chr6:2225673:C:A	rs569423489	C	A	A	Sox2_MA0143.3	1	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr6	2225673	2225674	chr6:2225674:T:C	rs538508741	T	C	C	Sox2_MA0143.3	2	1	+	8.864090315184848	2.5582713367092715	CCTTTGTG
chr6	2352378	2352379	chr6:2352379:A:G	rs17134937	A	G	A	Sox2_MA0143.3	-2	0	+	0	0	.
chr6	2352406	2352407	chr6:2352407:C:G	rs147779168	C	G	C	Sox2_MA0143.3	26	0	+	0	0	.
chr6	2353898	2353899	chr6:2353899:C:T	rs138956147	C	T	c	Sox2_MA0143.3	22	0	-	0	0	.
chr6	2396719	2396720	chr6:2396720:G:A	rs10155748	G	A	G	Sox2_MA0143.3	16	0	-	0	0	.
chr6	2411283	2411284	chr6:2411284:C:G	rs4959661	C	G	C	Sox2_MA0143.3	20	0	-	0	0	.
chr6	2460539	2460540	chr6:2460540:C:T	rs184461553	C	T	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr6	2508160	2508161	chr6:2508161:G:C	rs9503215	G	C	G	Sox2_MA0143.3	21	0	+	0	0	.
chr6	2547350	2547351	chr6:2547351:G:A	rs548852897	G	A	G	Sox2_MA0143.3	16	0	-	0	0	.
chr6	2577652	2577653	chr6:2577653:G:A	rs1384535	G	A	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr6	2644395	2644396	chr6:2644396:C:T	rs2170614	C	T	C	Sox2_MA0143.3	0	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr6	2658821	2658822	chr6:2658822:G:A	rs71552133	G	A	G	Sox2_MA0143.3	-11	0	+	0	0	.
chr6	2708632	2708633	chr6:2708633:T:C	rs57967844	T	C	T	Sox2_MA0143.3	-9	0	-	0	0	.
chr6	2820039	2820040	chr6:2820040:T:C	rs59393559	T	C	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr6	2821722	2821723	chr6:2821723:G:C	rs6929668	G	C	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr6	2843587	2843588	chr6:2843588:G:A	rs11759666	G	A	G	Sox2_MA0143.3	24	0	+	0	0	.
chr6	2854352	2854353	chr6:2854353:T:C	rs114537588	T	C	T	Sox2_MA0143.3	3	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr6	2859330	2859331	chr6:2859331:C:T	rs11752861	C	T	C	Sox2_MA0143.3	15	0	+	0	0	.
chr6	2899361	2899362	chr6:2899362:C:T	chr6:2899362:C:T	C	T	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr6	2973025	2973026	chr6:2973026:A:G	rs12525865	A	G	a	Sox2_MA0143.3	4	1	-	3.5547341015215945	-3.3540206777936254	CCTTTGTA
chr6	2999136	2999137	chr6:2999137:A:G	rs9405604	A	G	g	Sox2_MA0143.3	-4	0	-	0	0	.
chr6	3027077	3027078	chr6:3027078:G:C	rs190663284	G	C	G	Sox2_MA0143.3	27	0	-	0	0	.
chr6	3205241	3205242	chr6:3205242:T:C	rs12215375	T	C	C	Sox2_MA0143.3	14	0	-	0	0	.
chr6	3246570	3246571	chr6:3246571:T:C	rs73351007	T	C	T	Sox2_MA0143.3	-3	0	+	0	0	.
chr6	3247757	3247758	chr6:3247758:A:G	rs7746393	A	G	G	Sox2_MA0143.3	19	0	+	0	0	.
chr6	3265908	3265909	chr6:3265909:G:A	rs4959793	G	A	A	Sox2_MA0143.3	9	0	+	0	0	.
chr6	3288444	3288445	chr6:3288445:C:T	rs1226950118	C	T	C	Sox2_MA0143.3	7	1	-	8.676919043985553	3.3675628303222993	CCATTGTG
chr6	3319166	3319167	chr6:3319167:G:A	rs78403771	G	A	G	Sox2_MA0143.3	18	0	+	0	0	.
chr6	3340594	3340595	chr6:3340595:G:C	rs7762227	G	C	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr6	3351303	3351304	chr6:3351304:G:A	rs6917534	G	A	G	Sox2_MA0143.3	18	0	+	0	0	.
chr6	3402828	3402829	chr6:3402829:A:G	rs6936313	A	G	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr6	3412952	3412953	chr6:3412953:C:T	rs6899944	C	T	T	Sox2_MA0143.3	-19	0	+	0	0	.
chr6	3430439	3430440	chr6:3430440:G:A	rs4959240	G	A	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr6	3442081	3442082	chr6:3442082:C:T	rs12208859	C	T	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr6	3483207	3483208	chr6:3483208:T:A	rs7761353	T	A	T	Sox2_MA0143.3	-10	0	-	0	0	.
chr6	3504730	3504731	chr6:3504731:T:C	rs76656530	T	C	T	Sox2_MA0143.3	-12	0	+	0	0	.
chr6	3549761	3549762	chr6:3549762:G:T	rs6934461	G	T	T	Sox2_MA0143.3	27	0	+	0	0	.
chr6	3568652	3568653	chr6:3568653:G:A	rs983589026	G	A	G	Sox2_MA0143.3	7	1	+	8.676919043985553	3.3675628303222993	CCATTGTG
chr6	3569135	3569136	chr6:3569136:T:A	rs9378371	T	A	T	Sox2_MA0143.3	16	0	-	0	0	.
chr6	3607903	3607904	chr6:3607904:G:A	rs72845649	G	A	G	Sox2_MA0143.3	16	0	-	0	0	.
chr6	3624754	3624755	chr6:3624755:G:A	rs368389415	G	A	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr6	3626266	3626267	chr6:3626267:G:A	rs965135807	G	A	G	Sox2_MA0143.3	1	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr6	3628747	3628748	chr6:3628748:T:A	rs9392507	T	A	T	Sox2_MA0143.3	-18	0	+	0	0	.
chr6	3686184	3686185	chr6:3686185:G:T	rs7749290	G	T	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr6	3714698	3714699	chr6:3714699:A:G	rs226952	A	G	G	Sox2_MA0143.3	17	0	+	0	0	.
chr6	3745903	3745904	chr6:3745904:G:A	rs12526499	G	A	g	Sox2_MA0143.3	-19	0	-	0	0	.
chr6	3745903	3745904	chr6:3745904:G:T	chr6:3745904:G:T	G	T	g	Sox2_MA0143.3	-19	0	-	0	0	.
chr6	3768158	3768159	chr6:3768159:A:G	rs183836580	A	G	A	Sox2_MA0143.3	-3	0	-	0	0	.
chr6	3796280	3796281	chr6:3796281:T:C	rs144027903	T	C	T	Sox2_MA0143.3	18	0	+	0	0	.
chr6	3830165	3830166	chr6:3830166:G:A	rs73724219	G	A	G	Sox2_MA0143.3	-12	0	+	0	0	.
chr6	3839385	3839386	chr6:3839386:T:C	rs9503751	T	C	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr6	3839406	3839407	chr6:3839407:T:A	rs9503752	T	A	A	Sox2_MA0143.3	3	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr6	3865711	3865712	chr6:3865712:C:T	rs2490052	C	T	T	Sox2_MA0143.3	7	1	-	8.676919043985553	3.3675628303222993	CCATTGTG
chr6	3869480	3869481	chr6:3869481:A:G	rs2490031	A	G	A	Sox2_MA0143.3	-8	0	+	0	0	.
chr6	3940805	3940806	chr6:3940806:C:A	rs116478999	C	A	C	Sox2_MA0143.3	0	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr6	3963204	3963205	chr6:3963205:A:G	rs60357231	A	G	A	Sox2_MA0143.3	-19	0	-	0	0	.
chr6	4059144	4059145	chr6:4059145:A:G	rs707987	A	G	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr6	4059186	4059187	chr6:4059187:A:G	rs9503908	A	G	A	Sox2_MA0143.3	27	0	+	0	0	.
chr6	4059297	4059298	chr6:4059298:C:T	rs72841295	C	T	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr6	4059307	4059308	chr6:4059308:C:G	rs9503909	C	G	C	Sox2_MA0143.3	0	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr6	4126096	4126097	chr6:4126097:G:A	rs750746876	G	A	G	Sox2_MA0143.3	23	0	-	0	0	.
chr6	4155823	4155824	chr6:4155824:A:G	rs57827734	A	G	A	Sox2_MA0143.3	-3	0	-	0	0	.
chr6	4223907	4223908	chr6:4223908:C:T	rs113605535	C	T	C	Sox2_MA0143.3	1	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr6	4412952	4412953	chr6:4412953:G:A	rs1411656	G	A	A	Sox2_MA0143.3	-20	0	-	0	0	.
chr6	4415615	4415616	chr6:4415616:C:T	rs10900959	C	T	T	Sox2_MA0143.3	13	0	-	0	0	.
chr6	4420260	4420261	chr6:4420261:C:T	rs13200803	C	T	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr6	4439497	4439498	chr6:4439498:G:A	rs9378877	G	A	G	Sox2_MA0143.3	1	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr6	4451551	4451552	chr6:4451552:A:G	rs993421235	A	G	A	Sox2_MA0143.3	24	0	-	0	0	.
chr6	4459242	4459243	chr6:4459243:T:G	rs17511470	T	G	T	Sox2_MA0143.3	-9	0	-	0	0	.
chr6	4560376	4560377	chr6:4560377:G:A	rs440354	G	A	g	Sox2_MA0143.3	24	0	+	0	0	.
chr6	4581971	4581972	chr6:4581972:C:T	rs76085373	C	T	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr6	4600159	4600160	chr6:4600160:G:A	rs9328262	G	A	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr6	4600160	4600161	chr6:4600161:T:C	rs142487494	T	C	T	Sox2_MA0143.3	-12	0	+	0	0	.
chr6	4660734	4660735	chr6:4660735:C:A	rs34794197	C	A	C	Sox2_MA0143.3	15	0	-	0	0	.
chr6	4660763	4660764	chr6:4660764:G:C	rs9504183	G	C	c	Sox2_MA0143.3	-14	0	-	0	0	.
chr6	4674007	4674008	chr6:4674008:C:A	rs9392622	C	A	C	Sox2_MA0143.3	18	0	-	0	0	.
chr6	4682659	4682660	chr6:4682660:G:A	rs73354652	G	A	G	Sox2_MA0143.3	11	0	-	0	0	.
chr6	4686269	4686270	chr6:4686270:T:C	rs6597084	T	C	t	Sox2_MA0143.3	-19	0	-	0	0	.
chr6	4943903	4943904	chr6:4943904:G:A	rs141406952	G	A	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr6	5061345	5061346	chr6:5061346:G:A	rs9405253	G	A	g	Sox2_MA0143.3	-13	0	+	0	0	.
chr6	5061359	5061360	chr6:5061360:C:T	rs1247000	C	T	c	Sox2_MA0143.3	1	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr6	5087510	5087511	chr6:5087511:G:T	rs9504323	G	T	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr6	5143844	5143845	chr6:5143845:G:A	chr6:5143845:G:A	G	A	G	Sox2_MA0143.3	22	0	+	0	0	.
chr6	5149983	5149984	chr6:5149984:G:A	rs73717692	G	A	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr6	5177528	5177529	chr6:5177529:T:G	rs10458085	T	G	T	Sox2_MA0143.3	17	0	+	0	0	.
chr6	5185064	5185065	chr6:5185065:C:T	rs367803	C	T	C	Sox2_MA0143.3	7	1	+	9.206767037375712	9.800647049772198	CCTTTGTC
chr6	5190678	5190679	chr6:5190679:G:A	rs73363048	G	A	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr6	5457157	5457158	chr6:5457158:C:T	rs200205	C	T	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr6	5466374	5466375	chr6:5466375:C:G	rs77910221	C	G	G	Sox2_MA0143.3	18	0	+	0	0	.
chr6	5665153	5665154	chr6:5665154:T:C	rs12190311	T	C	T	Sox2_MA0143.3	3	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr6	5680396	5680397	chr6:5680397:G:A	rs138849558	G	A	G	Sox2_MA0143.3	18	0	+	0	0	.
chr6	5722947	5722948	chr6:5722948:C:T	rs6923842	C	T	T	Sox2_MA0143.3	26	0	-	0	0	.
chr6	5722993	5722994	chr6:5722994:C:A	rs6924018	C	A	C	Sox2_MA0143.3	-20	0	-	0	0	.
chr6	5725997	5725998	chr6:5725998:A:C	rs17292578	A	C	A	Sox2_MA0143.3	23	0	+	0	0	.
chr6	5822128	5822129	chr6:5822129:G:T	rs13218554	G	T	g	Sox2_MA0143.3	17	0	-	0	0	.
chr6	6057889	6057890	chr6:6057890:G:T	rs79461099	G	T	G	Sox2_MA0143.3	20	0	+	0	0	.
chr6	6152321	6152322	chr6:6152322:G:A	rs13213508	G	A	G	Sox2_MA0143.3	7	1	-	9.206767037375712	9.800647049772198	CCTTTGTC
chr6	6260515	6260516	chr6:6260516:C:T	rs3901123	C	T	C	Sox2_MA0143.3	1	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr6	6323804	6323805	chr6:6323805:A:T	rs6938914	A	T	a	Sox2_MA0143.3	-14	0	-	0	0	.
chr6	6376977	6376978	chr6:6376978:G:A	rs75128695	G	A	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr6	6487012	6487013	chr6:6487013:G:A	rs7740245	G	A	G	Sox2_MA0143.3	14	0	-	0	0	.
chr6	6543283	6543284	chr6:6543284:C:G	rs6921725	C	G	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr6	6558678	6558679	chr6:6558679:C:T	rs559417	C	T	T	Sox2_MA0143.3	16	0	+	0	0	.
chr6	6581210	6581211	chr6:6581211:G:A	rs7744727	G	A	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr6	6581215	6581216	chr6:6581216:G:A	rs9392807	G	A	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr6	6591957	6591958	chr6:6591958:C:T	rs9328376	C	T	T	Sox2_MA0143.3	23	0	-	0	0	.
chr6	6601064	6601065	chr6:6601065:C:T	rs3804468	C	T	T	Sox2_MA0143.3	20	0	+	0	0	.
chr6	6642361	6642362	chr6:6642362:A:G	rs3804488	A	G	A	Sox2_MA0143.3	3	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr6	6687652	6687653	chr6:6687653:C:A	rs57292806	C	A	A	Sox2_MA0143.3	-6	0	+	0	0	.
chr6	6714596	6714597	chr6:6714597:G:A	rs144767957	G	A	G	Sox2_MA0143.3	13	0	-	0	0	.
chr6	6784182	6784183	chr6:6784183:C:A	rs4959407	C	A	A	Sox2_MA0143.3	-12	0	-	0	0	.
chr6	6851451	6851452	chr6:6851452:T:C	rs115608393	T	C	T	Sox2_MA0143.3	-17	0	+	0	0	.
chr6	6873200	6873201	chr6:6873201:T:C	rs12201176	T	C	T	Sox2_MA0143.3	20	0	-	0	0	.
chr6	6883425	6883426	chr6:6883426:A:C	rs2148979	A	C	a	Sox2_MA0143.3	-5	0	-	0	0	.
chr6	7137387	7137388	chr6:7137388:G:C	rs75062200	G	C	G	Sox2_MA0143.3	16	0	+	0	0	.
chr6	7154052	7154053	chr6:7154053:A:G	rs530224695	A	G	A	Sox2_MA0143.3	3	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr6	7214442	7214443	chr6:7214443:C:T	rs12530084	C	T	C	Sox2_MA0143.3	23	0	+	0	0	.
chr6	7227812	7227813	chr6:7227813:T:C	rs2714311	T	C	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr6	7268389	7268390	chr6:7268390:C:T	rs2038829	C	T	C	Sox2_MA0143.3	19	0	-	0	0	.
chr6	7271328	7271329	chr6:7271329:G:A	rs111751954	G	A	G	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr6	7343930	7343931	chr6:7343931:A:G	rs2714319	A	G	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr6	7509337	7509338	chr6:7509338:C:G	rs7746819	C	G	C	Sox2_MA0143.3	8	0	+	0	0	.
chr6	7509351	7509352	chr6:7509352:A:C	rs7766511	A	C	A	Sox2_MA0143.3	22	0	+	0	0	.
chr6	7523951	7523952	chr6:7523952:G:A	rs2326925	G	A	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr6	7532187	7532188	chr6:7532188:A:G	rs72825047	A	G	A	Sox2_MA0143.3	16	0	+	0	0	.
chr6	7542384	7542385	chr6:7542385:C:A	rs113128340	C	A	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr6	7580724	7580725	chr6:7580725:A:G	rs2076299	A	G	A	Sox2_MA0143.3	-8	0	-	0	0	.
chr6	7589724	7589725	chr6:7589725:T:G	rs2806224	T	G	T	Sox2_MA0143.3	-14	0	-	0	0	.
chr6	7619035	7619036	chr6:7619036:A:G	rs9379117	A	G	A	Sox2_MA0143.3	4	1	-	8.864090315184848	1.9553355358696274	CCTTTGTG
chr6	7633254	7633255	chr6:7633255:A:G	rs2326974	A	G	a	Sox2_MA0143.3	-15	0	-	0	0	.
chr6	7641035	7641036	chr6:7641036:T:G	rs11970160	T	G	T	Sox2_MA0143.3	-17	0	-	0	0	.
chr6	7674641	7674642	chr6:7674642:A:G	rs2327014	A	G	G	Sox2_MA0143.3	17	0	+	0	0	.
chr6	7692551	7692552	chr6:7692552:G:C	rs1016244387	G	C	G	Sox2_MA0143.3	8	0	-	0	0	.
chr6	7807188	7807189	chr6:7807189:T:C	rs927401	T	C	C	Sox2_MA0143.3	26	0	-	0	0	.
chr6	7886499	7886500	chr6:7886500:C:T	rs147235970	C	T	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr6	7903395	7903396	chr6:7903396:G:A	rs1225958	G	A	G	Sox2_MA0143.3	13	0	+	0	0	.
chr6	7978911	7978912	chr6:7978912:T:C	rs148167410	T	C	T	Sox2_MA0143.3	14	0	+	0	0	.
chr6	8084643	8084644	chr6:8084644:C:T	rs9379163	C	T	c	Sox2_MA0143.3	-2	0	-	0	0	.
chr6	8108973	8108974	chr6:8108974:C:A	rs9392963	C	A	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr6	8140206	8140207	chr6:8140207:G:T	rs142913510	G	T	T	Sox2_MA0143.3	27	0	+	0	0	.
chr6	8195131	8195132	chr6:8195132:G:A	rs115341413	G	A	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr6	8195132	8195133	chr6:8195133:T:C	rs12214024	T	C	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr6	8206982	8206983	chr6:8206983:T:C	rs76092956	T	C	T	Sox2_MA0143.3	-9	0	+	0	0	.
chr6	8207786	8207787	chr6:8207787:G:A	rs115107877	G	A	G	Sox2_MA0143.3	0	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr6	8215773	8215774	chr6:8215774:A:C	rs1404633266	A	C	A	Sox2_MA0143.3	4	1	-	9.206767037375712	2.2980122580604916	CCTTTGTC
chr6	8218333	8218334	chr6:8218334:A:G	rs520215	A	G	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr6	8441612	8441613	chr6:8441613:A:G	rs78105287	A	G	G	Sox2_MA0143.3	9	0	-	0	0	.
chr6	8446666	8446667	chr6:8446667:C:G	rs1832098	C	G	C	Sox2_MA0143.3	20	0	+	0	0	.
chr6	8935886	8935887	chr6:8935887:C:A	rs9393079	C	A	C	Sox2_MA0143.3	22	0	+	0	0	.
chr6	8935887	8935888	chr6:8935888:C:G	rs12212068	C	G	C	Sox2_MA0143.3	23	0	+	0	0	.
chr6	9173433	9173434	chr6:9173434:G:A	rs9462672	G	A	G	Sox2_MA0143.3	-12	0	+	0	0	.
chr6	9338195	9338196	chr6:9338196:A:C	rs113416624	A	C	A	Sox2_MA0143.3	2	1	+	9.019595766176417	2.900948058900136	CCATTGTC
chr6	9338200	9338201	chr6:9338201:C:A	rs10946963	C	A	A	Sox2_MA0143.3	7	1	+	9.019595766176417	3.3675628303222993	CCATTGTC
chr6	9400576	9400577	chr6:9400577:C:G	rs6937558	C	G	C	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr6	9528060	9528061	chr6:9528061:G:T	rs78964279	G	T	G	Sox2_MA0143.3	22	0	+	0	0	.
chr6	9722965	9722966	chr6:9722966:A:G	rs10456766	A	G	G	Sox2_MA0143.3	14	0	-	0	0	.
chr6	10047680	10047681	chr6:10047681:A:G	rs855398	A	G	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr6	10047710	10047711	chr6:10047711:G:C	rs9477671	G	C	G	Sox2_MA0143.3	11	0	+	0	0	.
chr6	10202348	10202349	chr6:10202349:G:A	chr6:10202349:G:A	G	A	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr6	10203384	10203385	chr6:10203385:C:T	rs4712428	C	T	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr6	10296252	10296253	chr6:10296253:C:T	rs1333656	C	T	T	Sox2_MA0143.3	8	0	+	0	0	.
chr6	10303711	10303712	chr6:10303712:T:C	rs9348442	T	C	T	Sox2_MA0143.3	-16	0	+	0	0	.
chr6	10362362	10362363	chr6:10362363:T:C	rs9295506	T	C	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr6	10403416	10403417	chr6:10403417:C:T	rs3798696	C	T	T	Sox2_MA0143.3	8	0	-	0	0	.
chr6	10420247	10420248	chr6:10420248:G:C	rs303056	G	C	C	Sox2_MA0143.3	22	0	-	0	0	.
chr6	10453840	10453841	chr6:10453841:G:T	rs4712668	G	T	T	Sox2_MA0143.3	24	0	+	0	0	.
chr6	10554993	10554994	chr6:10554994:A:G	rs147014595	A	G	A	Sox2_MA0143.3	-14	0	+	0	0	.
chr6	10556192	10556193	chr6:10556193:G:T	rs545491917	G	T	G	Sox2_MA0143.3	15	0	-	0	0	.
chr6	10599064	10599065	chr6:10599065:C:G	rs9466911	C	G	C	Sox2_MA0143.3	21	0	-	0	0	.
chr6	10599086	10599087	chr6:10599087:G:A	rs9466912	G	A	A	Sox2_MA0143.3	-1	0	-	0	0	.
chr6	10693270	10693271	chr6:10693271:T:C	rs78263600	T	C	T	Sox2_MA0143.3	14	0	+	0	0	.
chr6	10695279	10695280	chr6:10695280:A:C	rs970126475	A	C	A	Sox2_MA0143.3	22	0	-	0	0	.
chr6	10723791	10723792	chr6:10723792:A:G	rs73438139	A	G	A	Sox2_MA0143.3	3	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr6	10724326	10724327	chr6:10724327:A:G	rs3756954	A	G	G	Sox2_MA0143.3	23	0	-	0	0	.
chr6	10751046	10751047	chr6:10751047:C:T	rs9689171	C	T	C	Sox2_MA0143.3	0	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr6	10801385	10801386	chr6:10801386:A:C	chr6:10801386:A:C	A	C	A	Sox2_MA0143.3	10	0	-	0	0	.
chr6	10968348	10968349	chr6:10968349:C:T	rs9348766	C	T	C	Sox2_MA0143.3	19	0	-	0	0	.
chr6	11161652	11161653	chr6:11161653:T:C	rs72825184	T	C	T	Sox2_MA0143.3	9	0	-	0	0	.
chr6	11197306	11197307	chr6:11197307:G:T	rs144451401	G	T	G	Sox2_MA0143.3	0	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr6	11201293	11201294	chr6:11201294:A:G	rs3798736	A	G	A	Sox2_MA0143.3	19	0	-	0	0	.
chr6	11263148	11263149	chr6:11263149:G:A	rs74772748	G	A	G	Sox2_MA0143.3	-12	0	+	0	0	.
chr6	11324844	11324845	chr6:11324845:C:G	rs6910667	C	G	C	Sox2_MA0143.3	14	0	-	0	0	.
chr6	11423135	11423136	chr6:11423136:A:T	rs9296006	A	T	A	Sox2_MA0143.3	-1	0	-	0	0	.
chr6	11427695	11427696	chr6:11427696:T:C	rs9394081	T	C	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr6	11486730	11486731	chr6:11486731:A:G	rs4713579	A	G	G	Sox2_MA0143.3	8	0	+	0	0	.
chr6	11527618	11527619	chr6:11527619:A:G	rs617157	A	G	A	Sox2_MA0143.3	2	1	+	8.676919043985553	2.5582713367092715	CCATTGTG
chr6	11538838	11538839	chr6:11538839:A:G	rs6938970	A	G	A	Sox2_MA0143.3	-4	0	-	0	0	.
chr6	11586376	11586377	chr6:11586377:A:C	rs76866617	A	C	A	Sox2_MA0143.3	-4	0	+	0	0	.
chr6	11586377	11586378	chr6:11586378:T:A	rs151106208	T	A	T	Sox2_MA0143.3	-3	0	+	0	0	.
chr6	11589422	11589423	chr6:11589423:G:A	rs6900578	G	A	G	Sox2_MA0143.3	8	0	-	0	0	.
chr6	11634488	11634489	chr6:11634489:C:T	rs821437	C	T	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr6	11650456	11650457	chr6:11650457:A:G	rs563298393	A	G	A	Sox2_MA0143.3	7	1	-	9.613475778572903	9.019595766176417	CCATTGTT
chr6	11672464	11672465	chr6:11672465:T:G	rs1150590	T	G	T	Sox2_MA0143.3	20	0	-	0	0	.
chr6	11710171	11710172	chr6:11710172:A:G	rs9348953	A	G	A	Sox2_MA0143.3	4	1	-	9.206767037375712	2.2980122580604916	CCTTTGTC
chr6	11744556	11744557	chr6:11744557:T:A	rs760789	T	A	T	Sox2_MA0143.3	19	0	+	0	0	.
chr6	11763169	11763170	chr6:11763170:G:C	rs2235393	G	C	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr6	11810456	11810457	chr6:11810457:G:A	rs189686203	G	A	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr6	11810473	11810474	chr6:11810474:C:T	rs1248057356	C	T	C	Sox2_MA0143.3	1	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr6	11811422	11811423	chr6:11811423:T:C	rs7746016	T	C	C	Sox2_MA0143.3	17	0	+	0	0	.
chr6	11894402	11894403	chr6:11894403:A:G	rs2092571	A	G	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr6	11911979	11911980	chr6:11911980:A:G	rs9366921	A	G	A	Sox2_MA0143.3	4	1	-	9.800647049772198	2.8918922704569785	CCTTTGTT
chr6	12294024	12294025	chr6:12294025:A:G	rs5369	A	G	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr6	12353870	12353871	chr6:12353871:T:G	rs76495479	T	G	T	Sox2_MA0143.3	12	0	+	0	0	.
chr6	12436829	12436830	chr6:12436830:C:T	rs6928514	C	T	T	Sox2_MA0143.3	10	0	+	0	0	.
chr6	12446630	12446631	chr6:12446631:A:T	rs9471832	A	T	A	Sox2_MA0143.3	14	0	-	0	0	.
chr6	12464259	12464260	chr6:12464260:A:C	rs9296385	A	C	C	Sox2_MA0143.3	9	0	-	0	0	.
chr6	12482575	12482576	chr6:12482576:C:A	rs112557008	C	A	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr6	12546110	12546111	chr6:12546111:A:G	rs62389999	A	G	A	Sox2_MA0143.3	27	0	+	0	0	.
chr6	12594999	12595000	chr6:12595000:C:A	rs2516232	C	A	a	Sox2_MA0143.3	9	0	-	0	0	.
chr6	12602092	12602093	chr6:12602093:G:C	rs113341000	G	C	G	Sox2_MA0143.3	-12	0	+	0	0	.
chr6	12851392	12851393	chr6:12851393:G:A	rs13191496	G	A	A	Sox2_MA0143.3	22	0	-	0	0	.
chr6	12881355	12881356	chr6:12881356:T:C	chr6:12881356:T:C	T	C	T	Sox2_MA0143.3	27	0	-	0	0	.
chr6	13068726	13068727	chr6:13068727:A:G	rs6920793	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr6	13178223	13178224	chr6:13178224:C:A	rs61041084	C	A	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr6	13226260	13226261	chr6:13226261:A:G	rs75513730	A	G	A	Sox2_MA0143.3	18	0	-	0	0	.
chr6	13274472	13274473	chr6:13274473:G:C	rs557584145	G	C	G	Sox2_MA0143.3	13	0	+	0	0	.
chr6	13302698	13302699	chr6:13302699:G:A	rs202022	G	A	A	Sox2_MA0143.3	1	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr6	13315965	13315966	chr6:13315966:A:G	rs2496157	A	G	A	Sox2_MA0143.3	-3	0	+	0	0	.
chr6	13399314	13399315	chr6:13399315:A:G	rs6914294	A	G	A	Sox2_MA0143.3	27	0	-	0	0	.
chr6	13420065	13420066	chr6:13420066:T:C	rs73366933	T	C	C	Sox2_MA0143.3	17	0	-	0	0	.
chr6	13420738	13420739	chr6:13420739:C:A	rs16874138	C	A	C	Sox2_MA0143.3	11	0	-	0	0	.
chr6	13420782	13420783	chr6:13420783:C:T	rs73366945	C	T	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr6	13422733	13422734	chr6:13422734:G:A	rs4145562	G	A	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr6	13428570	13428571	chr6:13428571:G:A	rs16874155	G	A	G	Sox2_MA0143.3	15	0	-	0	0	.
chr6	13481684	13481685	chr6:13481685:C:A	rs564008714	C	A	C	Sox2_MA0143.3	5	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr6	13527963	13527964	chr6:13527964:G:C	rs2494775	G	C	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr6	13532240	13532241	chr6:13532241:G:C	rs139509329	G	C	G	Sox2_MA0143.3	22	0	+	0	0	.
chr6	13661900	13661901	chr6:13661901:C:T	rs2299026	C	T	C	Sox2_MA0143.3	12	0	-	0	0	.
chr6	13708907	13708908	chr6:13708908:G:A	rs73358375	G	A	G	Sox2_MA0143.3	19	0	-	0	0	.
chr6	13708941	13708942	chr6:13708942:G:T	rs72831043	G	T	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr6	13787239	13787240	chr6:13787240:G:A	rs1277295847	G	A	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr6	13818498	13818499	chr6:13818499:T:C	rs9370483	T	C	T	Sox2_MA0143.3	27	0	-	0	0	.
chr6	13847640	13847641	chr6:13847641:C:T	rs6904311	C	T	T	Sox2_MA0143.3	1	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr6	14019715	14019716	chr6:14019716:A:G	rs6921840	A	G	A	Sox2_MA0143.3	-13	0	+	0	0	.
chr6	14025167	14025168	chr6:14025168:A:T	rs991622	A	T	T	Sox2_MA0143.3	9	0	+	0	0	.
chr6	14068954	14068955	chr6:14068955:G:A	rs9396468	G	A	G	Sox2_MA0143.3	15	0	+	0	0	.
chr6	14118586	14118587	chr6:14118587:G:A	rs7768355	G	A	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr6	14207787	14207788	chr6:14207788:T:G	rs1999358	T	G	T	Sox2_MA0143.3	15	0	+	0	0	.
chr6	14272178	14272179	chr6:14272179:G:A	rs13191916	G	A	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr6	14448482	14448483	chr6:14448483:C:T	rs61375516	C	T	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr6	14540506	14540507	chr6:14540507:G:A	rs3817757	G	A	G	Sox2_MA0143.3	-5	0	+	0	0	.
chr6	14540506	14540507	chr6:14540507:G:C	chr6:14540507:G:C	G	C	G	Sox2_MA0143.3	-5	0	+	0	0	.
chr6	14540515	14540516	chr6:14540516:T:C	rs3817758	T	C	t	Sox2_MA0143.3	4	1	+	9.206767037375712	2.2980122580604916	CCTTTGTC
chr6	14596789	14596790	chr6:14596790:T:G	rs75103368	T	G	T	Sox2_MA0143.3	8	0	-	0	0	.
chr6	14598935	14598936	chr6:14598936:T:C	rs857475	T	C	T	Sox2_MA0143.3	-13	0	+	0	0	.
chr6	14636664	14636665	chr6:14636665:G:A	rs6924248	G	A	G	Sox2_MA0143.3	26	0	+	0	0	.
chr6	14660234	14660235	chr6:14660235:A:G	rs77938554	A	G	A	Sox2_MA0143.3	27	0	-	0	0	.
chr6	14703801	14703802	chr6:14703802:T:C	rs186530421	T	C	T	Sox2_MA0143.3	24	0	-	0	0	.
chr6	14705320	14705321	chr6:14705321:G:A	rs860748	G	A	G	Sox2_MA0143.3	24	0	-	0	0	.
chr6	14705945	14705946	chr6:14705946:A:G	rs857440	A	G	A	Sox2_MA0143.3	26	0	-	0	0	.
chr6	14705953	14705954	chr6:14705954:T:C	rs56028431	T	C	T	Sox2_MA0143.3	18	0	-	0	0	.
chr6	14705954	14705955	chr6:14705955:G:A	rs857439	G	A	G	Sox2_MA0143.3	17	0	-	0	0	.
chr6	14711279	14711280	chr6:14711280:G:A	rs116426681	G	A	G	Sox2_MA0143.3	0	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr6	14713569	14713570	chr6:14713570:G:A	rs547969977	G	A	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr6	14734897	14734898	chr6:14734898:A:T	rs2472788	A	T	A	Sox2_MA0143.3	-17	0	-	0	0	.
chr6	14800015	14800016	chr6:14800016:T:C	rs73724597	T	C	T	Sox2_MA0143.3	-11	0	-	0	0	.
chr6	14814135	14814136	chr6:14814136:C:T	rs62390271	C	T	C	Sox2_MA0143.3	23	0	+	0	0	.
chr6	14881099	14881100	chr6:14881100:T:C	rs443427	T	C	T	Sox2_MA0143.3	26	0	-	0	0	.
chr6	15067289	15067290	chr6:15067290:C:T	rs4715960	C	T	T	Sox2_MA0143.3	20	0	+	0	0	.
chr6	15137353	15137354	chr6:15137354:T:C	rs2179989	T	C	C	Sox2_MA0143.3	4	1	+	9.206767037375712	2.2980122580604916	CCTTTGTC
chr6	15201378	15201379	chr6:15201379:C:T	rs7747401	C	T	C	Sox2_MA0143.3	23	0	+	0	0	.
chr6	15237217	15237218	chr6:15237218:C:G	rs12207467	C	G	c	Sox2_MA0143.3	5	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr6	15248744	15248745	chr6:15248745:G:A	rs1029900945	G	A	G	Sox2_MA0143.3	12	0	-	0	0	.
chr6	15248759	15248760	chr6:15248760:C:T	chr6:15248760:C:T	C	T	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr6	15283318	15283319	chr6:15283319:G:C	rs794786	G	C	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr6	15495240	15495241	chr6:15495241:G:T	rs72837824	G	T	G	Sox2_MA0143.3	27	0	+	0	0	.
chr6	15557607	15557608	chr6:15557608:A:T	rs6918834	A	T	T	Sox2_MA0143.3	10	0	-	0	0	.
chr6	15585869	15585870	chr6:15585870:A:T	rs77451123	A	T	A	Sox2_MA0143.3	-2	0	-	0	0	.
chr6	15658373	15658374	chr6:15658374:T:A	rs12196958	T	A	T	Sox2_MA0143.3	-16	0	+	0	0	.
chr6	15733257	15733258	chr6:15733258:T:C	rs16876830	T	C	T	Sox2_MA0143.3	3	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr6	15755774	15755775	chr6:15755775:C:A	rs2181435	C	A	A	Sox2_MA0143.3	0	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr6	15872828	15872829	chr6:15872829:A:G	rs34301608	A	G	A	Sox2_MA0143.3	-20	0	+	0	0	.
chr6	15909813	15909814	chr6:15909814:T:C	rs742384	T	C	C	Sox2_MA0143.3	6	1	+	8.676919043985553	1.7681642646703326	CCATTGTG
chr6	15996246	15996247	chr6:15996247:C:T	rs1891517	C	T	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr6	16064133	16064134	chr6:16064134:T:G	chr6:16064134:T:G	T	G	T	Sox2_MA0143.3	-14	0	+	0	0	.
chr6	16064138	16064139	chr6:16064139:T:G	chr6:16064139:T:G	T	G	T	Sox2_MA0143.3	-9	0	+	0	0	.
chr6	16168453	16168454	chr6:16168454:A:C	rs60208400	A	C	A	Sox2_MA0143.3	17	0	-	0	0	.
chr6	16223036	16223037	chr6:16223037:G:T	rs9396650	G	T	T	Sox2_MA0143.3	-12	0	+	0	0	.
chr6	16328474	16328475	chr6:16328475:G:T	rs917018105	G	T	G	Sox2_MA0143.3	25	0	-	0	0	.
chr6	16399070	16399071	chr6:16399071:G:A	rs56393937	G	A	g	Sox2_MA0143.3	18	0	-	0	0	.
chr6	16404298	16404299	chr6:16404299:A:G	rs12214500	A	G	A	Sox2_MA0143.3	9	0	-	0	0	.
chr6	16421041	16421042	chr6:16421042:C:T	rs150829314	C	T	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr6	16433551	16433552	chr6:16433552:A:G	rs7769399	A	G	G	Sox2_MA0143.3	21	0	+	0	0	.
chr6	16461712	16461713	chr6:16461713:C:T	rs12110539	C	T	C	Sox2_MA0143.3	8	0	-	0	0	.
chr6	16512110	16512111	chr6:16512111:G:C	rs2671403	G	C	-	Sox2_MA0143.3	-8	0	-	0	0	.
chr6	16512111	16512112	chr6:16512112:C:A	rs2671402	C	A	-	Sox2_MA0143.3	-9	0	-	0	0	.
chr6	16515151	16515152	chr6:16515152:C:G	rs9370898	C	G	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr6	16588011	16588012	chr6:16588012:A:G	rs236974	A	G	G	Sox2_MA0143.3	13	0	+	0	0	.
chr6	16669405	16669406	chr6:16669406:T:G	rs550693660	T	G	T	Sox2_MA0143.3	-1	0	-	0	0	.
chr6	16671941	16671942	chr6:16671942:T:C	rs7758530	T	C	T	Sox2_MA0143.3	-4	0	+	0	0	.
chr6	16714385	16714386	chr6:16714386:A:G	rs1262918	A	G	A	Sox2_MA0143.3	12	0	+	0	0	.
chr6	16732059	16732060	chr6:16732060:A:G	rs1150638	A	G	G	Sox2_MA0143.3	20	0	-	0	0	.
chr6	16745868	16745869	chr6:16745869:C:A	rs62388013	C	A	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr6	16758193	16758194	chr6:16758194:C:T	rs1322599	C	T	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr6	16769566	16769567	chr6:16769567:A:G	rs623897	A	G	G	Sox2_MA0143.3	7	1	+	3.5547341015215945	8.864090315184848	CCTTTGTA
chr6	16783847	16783848	chr6:16783848:A:G	rs74395222	A	G	A	Sox2_MA0143.3	22	0	+	0	0	.
chr6	16789546	16789547	chr6:16789547:C:A	rs765183	C	A	C	Sox2_MA0143.3	5	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr6	16852236	16852237	chr6:16852237:C:A	rs12209732	C	A	A	Sox2_MA0143.3	11	0	+	0	0	.
chr6	17081479	17081480	chr6:17081480:G:A	rs4236169	G	A	A	Sox2_MA0143.3	11	0	+	0	0	.
chr6	17091578	17091579	chr6:17091579:G:A	rs9464987	G	A	A	Sox2_MA0143.3	5	1	+	8.676919043985553	1.7681642646703324	CCATTGTG
chr6	17282717	17282718	chr6:17282718:G:A	rs111297761	G	A	G	Sox2_MA0143.3	-11	0	+	0	0	.
chr6	17391172	17391173	chr6:17391173:A:G	rs974946	A	G	A	Sox2_MA0143.3	26	0	-	0	0	.
chr6	17684567	17684568	chr6:17684568:C:T	rs7757195	C	T	C	Sox2_MA0143.3	1	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr6	17729639	17729640	chr6:17729640:C:G	rs9383316	C	G	N	Sox2_MA0143.3	-1	0	+	0	0	.
chr6	17751049	17751050	chr6:17751050:T:C	rs6459567	T	C	c	Sox2_MA0143.3	-8	0	+	0	0	.
chr6	17826438	17826439	chr6:17826439:T:G	rs10456812	T	G	T	Sox2_MA0143.3	22	0	-	0	0	.
chr6	17903116	17903117	chr6:17903117:T:C	rs112430238	T	C	T	Sox2_MA0143.3	20	0	-	0	0	.
chr6	18021216	18021217	chr6:18021217:A:G	rs12213124	A	G	A	Sox2_MA0143.3	7	1	+	3.5547341015215945	8.864090315184848	CCTTTGTA
chr6	18035412	18035413	chr6:18035413:A:G	rs4712323	A	G	A	Sox2_MA0143.3	22	0	+	0	0	.
chr6	18035414	18035415	chr6:18035415:G:A	rs4712324	G	A	A	Sox2_MA0143.3	24	0	+	0	0	.
chr6	18047421	18047422	chr6:18047422:C:T	rs6941347	C	T	T	Sox2_MA0143.3	-5	0	+	0	0	.
chr6	18047427	18047428	chr6:18047428:C:T	rs6941348	C	T	C	Sox2_MA0143.3	1	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr6	18353330	18353331	chr6:18353331:G:A	rs9297068	G	A	.	Sox2_MA0143.3	-19	0	+	0	0	.
chr6	18496783	18496784	chr6:18496784:G:T	rs146517888	G	T	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr6	18500689	18500690	chr6:18500690:C:A	rs4716275	C	A	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr6	18510515	18510516	chr6:18510516:C:T	rs912553	C	T	T	Sox2_MA0143.3	-6	0	+	0	0	.
chr6	18514759	18514760	chr6:18514760:G:A	rs953317064	G	A	T	Sox2_MA0143.3	-15	0	-	0	0	.
chr6	18586431	18586432	chr6:18586432:C:T	rs115392832	C	T	C	Sox2_MA0143.3	27	0	-	0	0	.
chr6	18742520	18742521	chr6:18742521:C:A	rs16881144	C	A	c	Sox2_MA0143.3	0	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr6	18937880	18937881	chr6:18937881:A:G	rs9383447	A	G	A	Sox2_MA0143.3	6	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr6	19006481	19006482	chr6:19006482:T:C	rs13190930	T	C	T	Sox2_MA0143.3	20	0	+	0	0	.
chr6	19209180	19209181	chr6:19209181:T:C	rs12526132	T	C	T	Sox2_MA0143.3	-20	0	+	0	0	.
chr6	19244743	19244744	chr6:19244744:T:C	rs4712373	T	C	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr6	19244760	19244761	chr6:19244761:C:G	rs9460318	C	G	C	Sox2_MA0143.3	-20	0	-	0	0	.
chr6	19293507	19293508	chr6:19293508:T:G	rs62404514	T	G	T	Sox2_MA0143.3	11	0	-	0	0	.
chr6	19320433	19320434	chr6:19320434:C:T	rs1016565178	C	T	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr6	19330172	19330173	chr6:19330173:C:G	rs9465337	C	G	C	Sox2_MA0143.3	0	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr6	19441834	19441835	chr6:19441835:T:A	rs4512210	T	A	A	Sox2_MA0143.3	6	1	+	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr6	19494094	19494095	chr6:19494095:A:G	rs4331972	A	G	a	Sox2_MA0143.3	2	1	+	9.019595766176417	2.900948058900136	CCATTGTC
chr6	19535588	19535589	chr6:19535589:C:G	rs6456248	C	G	G	Sox2_MA0143.3	-3	0	-	0	0	.
chr6	19628108	19628109	chr6:19628109:A:G	rs2328483	A	G	A	Sox2_MA0143.3	-7	0	-	0	0	.
chr6	19704360	19704361	chr6:19704361:G:A	rs9368110	G	A	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr6	19806680	19806681	chr6:19806681:C:T	rs12529140	C	T	C	Sox2_MA0143.3	12	0	-	0	0	.
chr6	19910150	19910151	chr6:19910151:G:T	rs77900408	G	T	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr6	19921996	19921997	chr6:19921997:A:G	rs994645	A	G	G	Sox2_MA0143.3	15	0	-	0	0	.
chr6	20013088	20013089	chr6:20013089:G:A	rs683316	G	A	G	Sox2_MA0143.3	0	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr6	20034549	20034550	chr6:20034550:C:T	rs493024	C	T	T	Sox2_MA0143.3	8	0	-	0	0	.
chr6	20084359	20084360	chr6:20084360:T:G	rs2457350	T	G	G	Sox2_MA0143.3	6	1	+	8.676919043985553	1.7681642646703326	CCATTGTG
chr6	20154827	20154828	chr6:20154828:G:T	rs16883439	G	T	T	Sox2_MA0143.3	15	0	+	0	0	.
chr6	20158295	20158296	chr6:20158296:A:G	rs114409732	A	G	A	Sox2_MA0143.3	6	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr6	20169425	20169426	chr6:20169426:G:T	rs745502157	G	T	g	Sox2_MA0143.3	-9	0	+	0	0	.
chr6	20174226	20174227	chr6:20174227:T:A	rs78540462	T	A	T	Sox2_MA0143.3	25	0	-	0	0	.
chr6	20217534	20217535	chr6:20217535:A:T	rs6907839	A	T	T	Sox2_MA0143.3	-19	0	+	0	0	.
chr6	20610709	20610710	chr6:20610710:T:C	rs2876574	T	C	T	Sox2_MA0143.3	22	0	-	0	0	.
chr6	20631117	20631118	chr6:20631118:C:T	rs976421091	C	T	C	Sox2_MA0143.3	14	0	+	0	0	.
chr6	20639372	20639373	chr6:20639373:G:A	rs7758612	G	A	A	Sox2_MA0143.3	-1	0	-	0	0	.
chr6	20676396	20676397	chr6:20676397:A:G	rs60063378	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr6	20694652	20694653	chr6:20694653:C:T	rs2206734	C	T	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr6	20856858	20856859	chr6:20856859:A:G	rs4710955	A	G	G	Sox2_MA0143.3	12	0	+	0	0	.
chr6	20875546	20875547	chr6:20875547:G:T	rs141771182	G	T	G	Sox2_MA0143.3	26	0	+	0	0	.
chr6	21111409	21111410	chr6:21111410:T:C	rs75426397	T	C	T	Sox2_MA0143.3	14	0	-	0	0	.
chr6	21137868	21137869	chr6:21137869:G:A	rs9358393	G	A	A	Sox2_MA0143.3	-20	0	+	0	0	.
chr6	21147515	21147516	chr6:21147516:A:G	rs1466339	A	G	A	Sox2_MA0143.3	9	0	+	0	0	.
chr6	21151389	21151390	chr6:21151390:G:A	rs9460601	G	A	G	Sox2_MA0143.3	8	0	-	0	0	.
chr6	21201261	21201262	chr6:21201262:G:A	rs9465994	G	A	A	Sox2_MA0143.3	13	0	-	0	0	.
chr6	21208249	21208250	chr6:21208250:A:C	rs145684014	A	C	A	Sox2_MA0143.3	14	0	-	0	0	.
chr6	21263979	21263980	chr6:21263980:T:C	rs553667545	T	C	T	Sox2_MA0143.3	17	0	-	0	0	.
chr6	21598861	21598862	chr6:21598862:A:C	rs754937681	A	C	A	Sox2_MA0143.3	-14	0	+	0	0	.
chr6	21856833	21856834	chr6:21856834:G:C	rs116265755	G	C	G	Sox2_MA0143.3	25	0	+	0	0	.
chr6	21891258	21891259	chr6:21891259:C:T	rs12214591	C	T	c	Sox2_MA0143.3	26	0	+	0	0	.
chr6	21925992	21925993	chr6:21925993:G:T	rs9358468	G	T	G	Sox2_MA0143.3	23	0	-	0	0	.
chr6	21925993	21925994	chr6:21925994:C:T	rs9358469	C	T	C	Sox2_MA0143.3	22	0	-	0	0	.
chr6	22003222	22003223	chr6:22003223:G:T	rs62404663	G	T	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr6	22036542	22036543	chr6:22036543:C:T	rs144400274	C	T	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr6	22036571	22036572	chr6:22036572:G:A	rs751808942	G	A	G	Sox2_MA0143.3	18	0	+	0	0	.
chr6	22113160	22113161	chr6:22113161:T:A	rs9295534	T	A	T	Sox2_MA0143.3	26	0	+	0	0	.
chr6	22148206	22148207	chr6:22148207:G:A	rs546655531	G	A	G	Sox2_MA0143.3	22	0	-	0	0	.
chr6	22314021	22314022	chr6:22314022:C:A	rs114686853	C	A	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr6	22413158	22413159	chr6:22413159:C:T	rs2744121	C	T	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr6	22459280	22459281	chr6:22459281:C:T	rs115725785	C	T	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr6	22613581	22613582	chr6:22613582:T:C	rs73738293	T	C	T	Sox2_MA0143.3	-5	0	+	0	0	.
chr6	22614500	22614501	chr6:22614501:C:T	rs9466410	C	T	T	Sox2_MA0143.3	14	0	-	0	0	.
chr6	22632697	22632698	chr6:22632698:T:C	rs150703731	T	C	T	Sox2_MA0143.3	-19	0	-	0	0	.
chr6	22633072	22633073	chr6:22633073:T:C	rs73384562	T	C	T	Sox2_MA0143.3	-11	0	+	0	0	.
chr6	22655837	22655838	chr6:22655838:C:G	rs9366468	C	G	C	Sox2_MA0143.3	11	0	-	0	0	.
chr6	22784298	22784299	chr6:22784299:T:C	rs141905789	T	C	T	Sox2_MA0143.3	-6	0	+	0	0	.
chr6	22784885	22784886	chr6:22784886:T:C	rs12660318	T	C	T	Sox2_MA0143.3	22	0	-	0	0	.
chr6	22784896	22784897	chr6:22784897:C:T	chr6:22784897:C:T	C	T	T	Sox2_MA0143.3	11	0	-	0	0	.
chr6	22809565	22809566	chr6:22809566:T:C	rs35349492	T	C	T	Sox2_MA0143.3	-18	0	-	0	0	.
chr6	23170212	23170213	chr6:23170213:A:G	rs6930352	A	G	G	Sox2_MA0143.3	-11	0	+	0	0	.
chr6	23245052	23245053	chr6:23245053:A:G	rs9356854	A	G	A	Sox2_MA0143.3	-8	0	+	0	0	.
chr6	23307738	23307739	chr6:23307739:C:T	rs72843033	C	T	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr6	23364984	23364985	chr6:23364985:C:T	rs9466760	C	T	C	Sox2_MA0143.3	15	0	+	0	0	.
chr6	23408188	23408189	chr6:23408189:G:T	rs62399726	G	T	G	Sox2_MA0143.3	5	1	+	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr6	23694309	23694310	chr6:23694310:T:C	rs12205517	T	C	T	Sox2_MA0143.3	-10	0	-	0	0	.
chr6	23729030	23729031	chr6:23729031:G:A	rs10946622	G	A	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr6	23795227	23795228	chr6:23795228:A:G	rs62399838	A	G	A	Sox2_MA0143.3	-7	0	+	0	0	.
chr6	23862226	23862227	chr6:23862227:A:G	rs61033041	A	G	G	Sox2_MA0143.3	16	0	-	0	0	.
chr6	24195530	24195531	chr6:24195531:A:G	rs2799373	A	G	A	Sox2_MA0143.3	-7	0	+	0	0	.
chr6	24219931	24219932	chr6:24219932:C:T	rs62403464	C	T	C	Sox2_MA0143.3	21	0	-	0	0	.
chr6	24237030	24237031	chr6:24237031:A:C	rs1087288	A	C	A	Sox2_MA0143.3	6	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr6	24281031	24281032	chr6:24281032:C:T	rs28921369	C	T	C	Sox2_MA0143.3	-5	0	-	0	0	.
chr6	24287322	24287323	chr6:24287323:A:G	rs3789228	A	G	A	Sox2_MA0143.3	-2	0	+	0	0	.
chr6	24487764	24487765	chr6:24487765:C:T	rs59061545	C	T	T	Sox2_MA0143.3	-8	0	+	0	0	.
chr6	24558527	24558528	chr6:24558528:A:G	rs2760166	A	G	G	Sox2_MA0143.3	16	0	-	0	0	.
chr6	24583480	24583481	chr6:24583481:A:G	chr6:24583481:A:G	A	G	A	Sox2_MA0143.3	-1	0	+	0	0	.
chr6	24583630	24583631	chr6:24583631:C:T	rs141038527	C	T	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr6	24601113	24601114	chr6:24601114:A:G	rs146563017	A	G	A	Sox2_MA0143.3	14	0	+	0	0	.
chr6	24666601	24666602	chr6:24666602:T:C	rs35744230	T	C	T	Sox2_MA0143.3	23	0	-	0	0	.
chr6	24691754	24691755	chr6:24691755:T:C	rs80127357	T	C	T	Sox2_MA0143.3	19	0	+	0	0	.
chr6	24697986	24697987	chr6:24697987:G:A	rs7765904	G	A	G	Sox2_MA0143.3	25	0	-	0	0	.
chr6	24765643	24765644	chr6:24765644:C:G	chr6:24765644:C:G	C	G	c	Sox2_MA0143.3	17	0	-	0	0	.
chr6	24807840	24807841	chr6:24807841:T:A	rs62400836	T	A	T	Sox2_MA0143.3	6	1	+	9.206767037375712	2.298012258060492	CCTTTGTC
chr6	24838351	24838352	chr6:24838352:C:A	rs7751675	C	A	C	Sox2_MA0143.3	10	0	-	0	0	.
chr6	24838365	24838366	chr6:24838366:T:C	rs67917914	T	C	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr6	25095054	25095055	chr6:25095055:A:G	rs9467394	A	G	A	Sox2_MA0143.3	-3	0	+	0	0	.
chr6	25123008	25123009	chr6:25123009:G:A	rs74832226	G	A	G	Sox2_MA0143.3	13	0	+	0	0	.
chr6	25215930	25215931	chr6:25215931:T:C	rs2328869	T	C	T	Sox2_MA0143.3	18	0	+	0	0	.
chr6	25233340	25233341	chr6:25233341:C:A	rs35997400	C	A	A	Sox2_MA0143.3	-3	0	+	0	0	.
chr6	25296377	25296378	chr6:25296378:G:A	rs2744294	G	A	A	Sox2_MA0143.3	-15	0	+	0	0	.
chr6	25308293	25308294	chr6:25308294:A:G	rs6903148	A	G	G	Sox2_MA0143.3	-5	0	+	0	0	.
chr6	25315311	25315312	chr6:25315312:T:C	rs6936496	T	C	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr6	25318817	25318818	chr6:25318818:A:G	rs113875637	A	G	A	Sox2_MA0143.3	-12	0	+	0	0	.
chr6	25331507	25331508	chr6:25331508:T:C	rs9467467	T	C	T	Sox2_MA0143.3	10	0	+	0	0	.
chr6	25332901	25332902	chr6:25332902:A:G	rs2690077	A	G	G	Sox2_MA0143.3	10	0	+	0	0	.
chr6	25337502	25337503	chr6:25337503:G:T	rs1983581	G	T	T	Sox2_MA0143.3	22	0	-	0	0	.
chr6	25359598	25359599	chr6:25359599:C:G	chr6:25359599:C:G	C	G	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr6	25600004	25600005	chr6:25600005:A:G	rs77346695	A	G	A	Sox2_MA0143.3	26	0	-	0	0	.
chr6	25602248	25602249	chr6:25602249:C:G	rs9885619	C	G	C	Sox2_MA0143.3	8	0	-	0	0	.
chr6	25602584	25602585	chr6:25602585:A:G	rs142487992	A	G	A	Sox2_MA0143.3	-12	0	+	0	0	.
chr6	25628623	25628624	chr6:25628624:T:A	rs2223323	T	A	T	Sox2_MA0143.3	-18	0	+	0	0	.
chr6	25638235	25638236	chr6:25638236:A:T	rs9467545	A	T	A	Sox2_MA0143.3	-14	0	+	0	0	.
chr6	25638240	25638241	chr6:25638241:C:T	rs6456686	C	T	T	Sox2_MA0143.3	-9	0	+	0	0	.
chr6	25777130	25777131	chr6:25777131:G:A	rs73736908	G	A	G	Sox2_MA0143.3	-2	0	+	0	0	.
chr6	25777826	25777827	chr6:25777827:C:T	rs12201071	C	T	C	Sox2_MA0143.3	1	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr6	25928254	25928255	chr6:25928255:A:G	rs76227198	A	G	A	Sox2_MA0143.3	22	0	+	0	0	.
chr6	25992210	25992211	chr6:25992211:A:C	chr6:25992211:A:C	A	C	A	Sox2_MA0143.3	-12	0	+	0	0	.
chr6	26017425	26017426	chr6:26017426:C:G	rs201969543	C	G	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr6	26017446	26017447	chr6:26017447:A:G	rs62000984	A	G	A	Sox2_MA0143.3	15	0	+	0	0	.
chr6	26017452	26017453	chr6:26017453:C:T	chr6:26017453:C:T	C	T	C	Sox2_MA0143.3	21	0	+	0	0	.
chr6	26044920	26044921	chr6:26044921:G:C	chr6:26044921:G:C	G	C	G	Sox2_MA0143.3	1	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr6	26048523	26048524	chr6:26048524:C:A	rs10807006	C	A	C	Sox2_MA0143.3	20	0	+	0	0	.
chr6	26055161	26055162	chr6:26055162:G:A	rs114170326	G	A	G	Sox2_MA0143.3	11	0	-	0	0	.
chr6	26055171	26055172	chr6:26055172:G:A	rs187352464	G	A	G	Sox2_MA0143.3	1	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr6	26104884	26104885	chr6:26104885:T:C	rs77694735	T	C	T	Sox2_MA0143.3	-10	0	-	0	0	.
chr6	26123329	26123330	chr6:26123330:T:A	rs548119883	T	A	T	Sox2_MA0143.3	-18	0	+	0	0	.
chr6	26123365	26123366	chr6:26123366:C:G	rs561633884	C	G	C	Sox2_MA0143.3	18	0	+	0	0	.
chr6	26160415	26160416	chr6:26160416:T:C	rs181191389	T	C	T	Sox2_MA0143.3	2	1	-	9.019595766176417	2.900948058900136	CCATTGTC
chr6	26160427	26160428	chr6:26160428:G:T	rs374182283	G	T	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr6	26198785	26198786	chr6:26198786:G:A	rs34550794	G	A	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr6	26215919	26215920	chr6:26215920:C:A	rs151232111	C	A	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr6	26215936	26215937	chr6:26215937:C:T	rs11751062	C	T	C	Sox2_MA0143.3	15	0	+	0	0	.
chr6	26224400	26224401	chr6:26224401:T:C	rs73393471	T	C	T	Sox2_MA0143.3	3	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr6	26250025	26250026	chr6:26250026:C:G	rs11759720	C	G	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr6	26305516	26305517	chr6:26305517:G:A	rs116212178	G	A	G	Sox2_MA0143.3	15	0	-	0	0	.
chr6	26305530	26305531	chr6:26305531:G:A	rs553266629	G	A	G	Sox2_MA0143.3	1	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr6	26305956	26305957	chr6:26305957:C:G	rs72836428	C	G	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr6	26385519	26385520	chr6:26385520:G:A	rs16891635	G	A	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr6	26388443	26388444	chr6:26388444:C:T	rs1796518	C	T	C	Sox2_MA0143.3	13	0	-	0	0	.
chr6	26533025	26533026	chr6:26533026:G:C	rs139391704	G	C	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr6	26535234	26535235	chr6:26535235:C:G	rs77912281	C	G	C	Sox2_MA0143.3	-5	0	-	0	0	.
chr6	26554326	26554327	chr6:26554327:G:A	rs139867912	G	A	G	Sox2_MA0143.3	8	0	+	0	0	.
chr6	26557237	26557238	chr6:26557238:T:C	rs139591095	T	C	t	Sox2_MA0143.3	24	0	+	0	0	.
chr6	26575757	26575758	chr6:26575758:T:C	rs1570061	T	C	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr6	26598569	26598570	chr6:26598570:G:A	rs3800304	G	A	.	Sox2_MA0143.3	-1	0	-	0	0	.
chr6	26739655	26739656	chr6:26739656:A:G	rs12194844	A	G	.	Sox2_MA0143.3	14	0	-	0	0	.
chr6	26754588	26754589	chr6:26754589:C:G	rs115284711	C	G	.	Sox2_MA0143.3	14	0	+	0	0	.
chr6	27033508	27033509	chr6:27033509:G:A	rs12527231	G	A	.	Sox2_MA0143.3	-12	0	-	0	0	.
chr6	27139284	27139285	chr6:27139285:C:T	rs1315959858	C	T	T	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr6	27139740	27139741	chr6:27139741:C:T	rs116675691	C	T	C	Sox2_MA0143.3	16	0	+	0	0	.
chr6	27147524	27147525	chr6:27147525:T:A	rs201377958	T	A	T	Sox2_MA0143.3	22	0	-	0	0	.
chr6	27147560	27147561	chr6:27147561:C:T	rs371828841	C	T	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr6	27178325	27178326	chr6:27178326:A:T	rs9468002	A	T	a	Sox2_MA0143.3	-11	0	+	0	0	.
chr6	27187808	27187809	chr6:27187809:T:G	rs113014817	T	G	T	Sox2_MA0143.3	-10	0	-	0	0	.
chr6	27238593	27238594	chr6:27238594:C:A	chr6:27238594:C:A	C	A	C	Sox2_MA0143.3	27	0	-	0	0	.
chr6	27239063	27239064	chr6:27239064:C:G	rs3800310	C	G	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr6	27289934	27289935	chr6:27289935:A:G	rs9393803	A	G	A	Sox2_MA0143.3	10	0	-	0	0	.
chr6	27298047	27298048	chr6:27298048:C:T	rs62401095	C	T	C	Sox2_MA0143.3	13	0	+	0	0	.
chr6	27375840	27375841	chr6:27375841:A:G	rs12374607	A	G	A	Sox2_MA0143.3	6	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr6	27380690	27380691	chr6:27380691:A:G	rs9468082	A	G	A	Sox2_MA0143.3	10	0	-	0	0	.
chr6	27479473	27479474	chr6:27479474:G:A	rs141651116	G	A	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr6	27503318	27503319	chr6:27503319:G:T	rs10946933	G	T	T	Sox2_MA0143.3	-10	0	+	0	0	.
chr6	27663008	27663009	chr6:27663009:G:C	rs9468190	G	C	G	Sox2_MA0143.3	5	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr6	27688452	27688453	chr6:27688453:A:G	rs1051146861	A	G	A	Sox2_MA0143.3	22	0	-	0	0	.
chr6	27688475	27688476	chr6:27688476:G:A	rs10946943	G	A	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr6	27688477	27688478	chr6:27688478:C:G	rs960334277	C	G	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr6	27743750	27743751	chr6:27743751:C:T	rs6914924	C	T	N	Sox2_MA0143.3	-7	0	-	0	0	.
chr6	27752507	27752508	chr6:27752508:A:G	rs144877376	A	G	a	Sox2_MA0143.3	8	0	+	0	0	.
chr6	27757430	27757431	chr6:27757431:A:C	chr6:27757431:A:C	A	C	a	Sox2_MA0143.3	18	0	-	0	0	.
chr6	27830478	27830479	chr6:27830479:T:C	rs200489	T	C	T	Sox2_MA0143.3	13	0	-	0	0	.
chr6	27873754	27873755	chr6:27873755:C:T	rs74631405	C	T	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr6	27898123	27898124	chr6:27898124:A:T	rs66868086	A	T	A	Sox2_MA0143.3	27	0	-	0	0	.
chr6	28165749	28165750	chr6:28165750:G:C	rs9393899	G	C	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr6	28213091	28213092	chr6:28213092:A:C	rs78966053	A	C	a	Sox2_MA0143.3	16	0	+	0	0	.
chr6	28225306	28225307	chr6:28225307:C:T	rs527628225	C	T	C	Sox2_MA0143.3	13	0	+	0	0	.
chr6	28266818	28266819	chr6:28266819:C:T	rs2799077	C	T	T	Sox2_MA0143.3	20	0	+	0	0	.
chr6	28335383	28335384	chr6:28335384:G:C	rs72854527	G	C	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr6	28335822	28335823	chr6:28335823:A:C	rs59598126	A	C	A	Sox2_MA0143.3	-6	0	+	0	0	.
chr6	28383367	28383368	chr6:28383368:A:C	rs1297758593	A	C	A	Sox2_MA0143.3	27	0	-	0	0	.
chr6	28399967	28399968	chr6:28399968:G:C	rs2232420	G	C	G	Sox2_MA0143.3	20	0	+	0	0	.
chr6	28430009	28430010	chr6:28430010:A:G	rs740621	A	G	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr6	28443466	28443467	chr6:28443467:G:A	rs13190937	G	A	G	Sox2_MA0143.3	25	0	-	0	0	.
chr6	28531088	28531089	chr6:28531089:G:A	rs28382603	G	A	A	Sox2_MA0143.3	-20	0	+	0	0	.
chr6	28607394	28607395	chr6:28607395:T:A	rs1474986	T	A	T	Sox2_MA0143.3	-6	0	+	0	0	.
chr6	28696853	28696854	chr6:28696854:A:G	rs4143771	A	G	A	Sox2_MA0143.3	14	0	+	0	0	.
chr6	28769195	28769196	chr6:28769196:T:G	rs9257158	T	G	T	Sox2_MA0143.3	2	1	-	8.676919043985553	2.5582713367092715	CCATTGTG
chr6	28826075	28826076	chr6:28826076:C:G	rs209179	C	G	G	Sox2_MA0143.3	5	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr6	28881340	28881341	chr6:28881341:T:C	rs370981654	T	C	T	Sox2_MA0143.3	-10	0	+	0	0	.
chr6	28881362	28881363	chr6:28881363:A:G	rs72845350	A	G	A	Sox2_MA0143.3	12	0	+	0	0	.
chr6	28881372	28881373	chr6:28881373:C:G	rs574424349	C	G	C	Sox2_MA0143.3	22	0	+	0	0	.
chr6	28881374	28881375	chr6:28881375:G:A	rs528509744	G	A	C	Sox2_MA0143.3	24	0	+	0	0	.
chr6	28944680	28944681	chr6:28944681:T:C	rs2071785	T	C	C	Sox2_MA0143.3	24	0	-	0	0	.
chr6	28970575	28970576	chr6:28970576:T:A	rs12110866	T	A	t	Sox2_MA0143.3	10	0	-	0	0	.
chr6	29180841	29180842	chr6:29180842:A:C	rs3130745	A	C	A	Sox2_MA0143.3	-2	0	+	0	0	.
chr6	29509355	29509356	chr6:29509356:G:A	rs35617617	G	A	G	Sox2_MA0143.3	27	0	-	0	0	.
chr6	29534142	29534143	chr6:29534143:C:G	rs2745408	C	G	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr6	29608318	29608319	chr6:29608319:T:C	rs41286283	T	C	T	Sox2_MA0143.3	27	0	+	0	0	.
chr6	29622571	29622572	chr6:29622572:G:A	rs3025628	G	A	G	Sox2_MA0143.3	15	0	-	0	0	.
chr6	29696111	29696112	chr6:29696112:T:C	rs3131888	T	C	T	Sox2_MA0143.3	-8	0	+	0	0	.
chr6	29762575	29762576	chr6:29762576:T:G	rs1633050	T	G	g	Sox2_MA0143.3	18	0	+	0	0	.
chr6	29762580	29762581	chr6:29762581:T:C	rs1737071	T	C	c	Sox2_MA0143.3	23	0	+	0	0	.
chr6	29770509	29770510	chr6:29770510:A:G	rs1611270	A	G	A	Sox2_MA0143.3	9	0	-	0	0	.
chr6	29770520	29770521	chr6:29770521:G:T	rs1611271	G	T	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr6	29828714	29828715	chr6:29828715:G:A	rs17875402	G	A	-	Sox2_MA0143.3	24	0	-	0	0	.
chr6	29852939	29852940	chr6:29852940:A:G	rs2523756	A	G	-	Sox2_MA0143.3	2	1	-	8.864090315184848	2.5582713367092715	CCTTTGTG
chr6	29860844	29860845	chr6:29860845:A:G	rs1611706	A	G	-	Sox2_MA0143.3	-8	0	-	0	0	.
chr6	29890698	29890699	chr6:29890699:T:C	rs9259278	T	C	-	Sox2_MA0143.3	-7	0	+	0	0	.
chr6	29890705	29890706	chr6:29890706:C:T	rs72495905	C	T	-	Sox2_MA0143.3	0	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr6	29906274	29906275	chr6:29906275:G:A	rs9259596	G	A	-	Sox2_MA0143.3	-6	0	-	0	0	.
chr6	29906278	29906279	chr6:29906279:A:G	rs9259597	A	G	-	Sox2_MA0143.3	-10	0	-	0	0	.
chr6	29910780	29910781	chr6:29910781:C:T	rs2524030	C	T	-	Sox2_MA0143.3	13	0	+	0	0	.
chr6	29910781	29910782	chr6:29910782:G:A	rs2975021	G	A	-	Sox2_MA0143.3	14	0	+	0	0	.
chr6	29929481	29929482	chr6:29929482:T:A	rs2517749	T	A	-	Sox2_MA0143.3	27	0	+	0	0	.
chr6	29930166	29930167	chr6:29930167:A:G	rs9259870	A	G	-	Sox2_MA0143.3	2	1	-	9.206767037375712	2.900948058900136	CCTTTGTC
chr6	29945488	29945489	chr6:29945489:G:T	rs1061156	G	T	-	Sox2_MA0143.3	-16	0	+	0	0	.
chr6	29946028	29946029	chr6:29946029:C:A	rs2905763	C	A	-	Sox2_MA0143.3	26	0	+	0	0	.
chr6	29966570	29966571	chr6:29966571:A:C	rs17186475	A	C	-	Sox2_MA0143.3	6	1	-	8.676919043985553	1.7681642646703326	CCATTGTG
chr6	29976590	29976591	chr6:29976591:T:C	rs77378907	T	C	-	Sox2_MA0143.3	22	0	-	0	0	.
chr6	29980666	29980667	chr6:29980667:G:A	rs369404313	G	A	-	Sox2_MA0143.3	1	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr6	29994289	29994290	chr6:29994290:T:A	rs9260982	T	A	-	Sox2_MA0143.3	-10	0	+	0	0	.
chr6	30095861	30095862	chr6:30095862:G:A	rs147268095	G	A	G	Sox2_MA0143.3	23	0	-	0	0	.
chr6	30095874	30095875	chr6:30095875:G:C	rs1264706	G	C	G	Sox2_MA0143.3	10	0	-	0	0	.
chr6	30095882	30095883	chr6:30095883:T:G	rs7761563	T	G	G	Sox2_MA0143.3	2	1	-	9.613475778572903	3.494828071296623	CCATTGTT
chr6	30095896	30095897	chr6:30095897:G:C	rs1264705	G	C	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr6	30100783	30100784	chr6:30100784:G:T	rs1420554496	G	T	G	Sox2_MA0143.3	25	0	+	0	0	.
chr6	30106532	30106533	chr6:30106533:C:G	rs78026509	C	G	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr6	30127062	30127063	chr6:30127063:G:A	rs9261446	G	A	G	Sox2_MA0143.3	11	0	+	0	0	.
chr6	30135793	30135794	chr6:30135794:A:G	rs1541267	A	G	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr6	30150347	30150348	chr6:30150348:C:A	rs766499747	C	A	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr6	30150350	30150351	chr6:30150351:T:C	rs9261525	T	C	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr6	30153167	30153168	chr6:30153168:T:G	rs9261532	T	G	G	Sox2_MA0143.3	8	0	-	0	0	.
chr6	30326197	30326198	chr6:30326198:T:C	chr6:30326198:T:C	T	C	T	Sox2_MA0143.3	24	0	-	0	0	.
chr6	30326223	30326224	chr6:30326224:G:A	rs982114002	G	A	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr6	30396167	30396168	chr6:30396168:C:T	rs3130113	C	T	-	Sox2_MA0143.3	17	0	+	0	0	.
chr6	30399233	30399234	chr6:30399234:T:C	rs1264565	T	C	-	Sox2_MA0143.3	23	0	+	0	0	.
chr6	30399235	30399236	chr6:30399236:G:A	rs1362118	G	A	-	Sox2_MA0143.3	25	0	+	0	0	.
chr6	30399757	30399758	chr6:30399758:T:C	rs9261739	T	C	-	Sox2_MA0143.3	-11	0	-	0	0	.
chr6	30460658	30460659	chr6:30460659:A:C	rs2077314	A	C	a	Sox2_MA0143.3	-19	0	+	0	0	.
chr6	30528082	30528083	chr6:30528083:A:G	rs3094024	A	G	A	Sox2_MA0143.3	-18	0	+	0	0	.
chr6	30697211	30697212	chr6:30697212:A:T	rs7773711	A	T	A	Sox2_MA0143.3	3	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr6	30737051	30737052	chr6:30737052:G:A	rs78955922	G	A	G	Sox2_MA0143.3	5	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr6	30744688	30744689	chr6:30744689:C:T	rs9468822	C	T	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr6	30763778	30763779	chr6:30763779:C:T	rs3094120	C	T	C	Sox2_MA0143.3	14	0	-	0	0	.
chr6	30770691	30770692	chr6:30770692:A:G	rs3094115	A	G	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr6	30770698	30770699	chr6:30770699:C:T	rs12527188	C	T	C	Sox2_MA0143.3	1	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr6	30774356	30774357	chr6:30774357:G:A	rs4248148	G	A	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr6	30788405	30788406	chr6:30788406:C:T	rs4713365	C	T	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr6	30794923	30794924	chr6:30794924:G:T	rs60332850	G	T	G	Sox2_MA0143.3	16	0	+	0	0	.
chr6	30804947	30804948	chr6:30804948:A:G	rs12189560	A	G	G	Sox2_MA0143.3	21	0	-	0	0	.
chr6	30807172	30807173	chr6:30807173:A:G	rs139765692	A	G	A	Sox2_MA0143.3	-7	0	-	0	0	.
chr6	30809826	30809827	chr6:30809827:A:G	rs9394017	A	G	G	Sox2_MA0143.3	26	0	-	0	0	.
chr6	30809870	30809871	chr6:30809871:A:C	rs9380196	A	C	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr6	30827550	30827551	chr6:30827551:C:A	rs12215119	C	A	C	Sox2_MA0143.3	16	0	+	0	0	.
chr6	30834672	30834673	chr6:30834673:A:C	rs1044037275	A	C	A	Sox2_MA0143.3	-9	0	-	0	0	.
chr6	30839957	30839958	chr6:30839958:T:G	rs9262222	T	G	T	Sox2_MA0143.3	-12	0	-	0	0	.
chr6	30845471	30845472	chr6:30845472:C:T	rs2535332	C	T	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr6	30848008	30848009	chr6:30848009:G:A	rs145030941	G	A	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr6	30851479	30851480	chr6:30851480:G:A	rs3130652	G	A	G	Sox2_MA0143.3	0	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr6	30864065	30864066	chr6:30864066:T:C	rs3130791	T	C	T	Sox2_MA0143.3	23	0	+	0	0	.
chr6	30882658	30882659	chr6:30882659:T:C	rs28362611	T	C	T	Sox2_MA0143.3	26	0	-	0	0	.
chr6	30886223	30886224	chr6:30886224:G:A	rs948780760	G	A	G	Sox2_MA0143.3	18	0	+	0	0	.
chr6	30931599	30931600	chr6:30931600:C:G	rs2253588	C	G	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr6	30997133	30997134	chr6:30997134:G:T	rs76095072	G	T	G	Sox2_MA0143.3	14	0	-	0	0	.
chr6	31011056	31011057	chr6:31011057:G:T	rs28360975	G	T	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr6	31111058	31111059	chr6:31111059:G:A	rs3734854	G	A	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr6	31129405	31129406	chr6:31129406:C:G	rs3130558	C	G	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr6	31166255	31166256	chr6:31166256:A:T	rs115513668	A	T	A	Sox2_MA0143.3	7	1	-	9.800647049772198	3.5547341015215945	CCTTTGTT
chr6	31173131	31173132	chr6:31173132:T:G	rs79527728	T	G	T	Sox2_MA0143.3	26	0	+	0	0	.
chr6	31196231	31196232	chr6:31196232:G:T	rs28742573	G	T	G	Sox2_MA0143.3	5	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr6	31199569	31199570	chr6:31199570:G:A	rs28397285	G	A	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr6	31199571	31199572	chr6:31199572:C:G	rs181774817	C	G	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr6	31208468	31208469	chr6:31208469:C:T	rs4410769	C	T	T	Sox2_MA0143.3	22	0	-	0	0	.
chr6	31216647	31216648	chr6:31216648:G:A	rs9501522	G	A	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr6	31216684	31216685	chr6:31216685:C:T	rs34788020	C	T	C	Sox2_MA0143.3	19	0	+	0	0	.
chr6	31216685	31216686	chr6:31216686:A:G	rs35887284	A	G	a	Sox2_MA0143.3	20	0	+	0	0	.
chr6	31218261	31218262	chr6:31218262:C:T	rs9263964	C	T	C	Sox2_MA0143.3	11	0	-	0	0	.
chr6	31235439	31235440	chr6:31235440:G:C	rs3134772	G	C	C	Sox2_MA0143.3	11	0	+	0	0	.
chr6	31245635	31245636	chr6:31245636:T:G	rs4332019	T	G	T	Sox2_MA0143.3	25	0	-	0	0	.
chr6	31263490	31263491	chr6:31263491:A:G	rs9501556	A	G	A	Sox2_MA0143.3	8	0	-	0	0	.
chr6	31267722	31267723	chr6:31267723:A:C	rs9264571	A	C	C	Sox2_MA0143.3	2	1	+	8.676919043985553	2.5582713367092715	CCATTGTG
chr6	31267724	31267725	chr6:31267725:T:A	rs9264572	T	A	t	Sox2_MA0143.3	4	1	+	8.676919043985553	1.7681642646703322	CCATTGTG
chr6	31268038	31268039	chr6:31268039:A:G	rs9264582	A	G	a	Sox2_MA0143.3	20	0	-	0	0	.
chr6	31269122	31269123	chr6:31269123:G:A	rs1049853	G	A	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr6	31269126	31269127	chr6:31269127:T:C	rs183137172	T	C	T	Sox2_MA0143.3	-6	0	-	0	0	.
chr6	31308982	31308983	chr6:31308983:T:C	rs1005598	T	C	C	Sox2_MA0143.3	20	0	-	0	0	.
chr6	31308999	31309000	chr6:31309000:A:G	rs1634791	A	G	G	Sox2_MA0143.3	3	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr6	31321770	31321771	chr6:31321771:C:T	rs9265185	C	T	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr6	31321862	31321863	chr6:31321863:C:T	rs9265190	C	T	C	Sox2_MA0143.3	18	0	+	0	0	.
chr6	31328476	31328477	chr6:31328477:G:A	rs3130702	G	A	G	Sox2_MA0143.3	27	0	-	0	0	.
chr6	31328756	31328757	chr6:31328757:T:C	rs3130703	T	C	T	Sox2_MA0143.3	-19	0	-	0	0	.
chr6	31336826	31336827	chr6:31336827:G:A	rs28752947	G	A	G	Sox2_MA0143.3	18	0	-	0	0	.
chr6	31336835	31336836	chr6:31336836:G:A	rs28752948	G	A	G	Sox2_MA0143.3	9	0	-	0	0	.
chr6	31336854	31336855	chr6:31336855:G:A	rs28752949	G	A	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr6	31337014	31337015	chr6:31337015:A:T	rs28367799	A	T	A	Sox2_MA0143.3	6	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr6	31337020	31337021	chr6:31337021:G:T	rs199753681	G	T	G	Sox2_MA0143.3	0	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr6	31337227	31337228	chr6:31337228:A:T	rs113977555	A	T	A	Sox2_MA0143.3	27	0	-	0	0	.
chr6	31337244	31337245	chr6:31337245:G:A	rs77912927	G	A	G	Sox2_MA0143.3	10	0	-	0	0	.
chr6	31337250	31337251	chr6:31337251:A:C	rs28367807	A	C	A	Sox2_MA0143.3	4	1	-	9.800647049772198	2.8918922704569785	CCTTTGTT
chr6	31337265	31337266	chr6:31337266:G:T	rs1634764	G	T	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr6	31337375	31337376	chr6:31337376:G:A	rs28367815	G	A	G	Sox2_MA0143.3	7	1	-	9.206767037375712	9.800647049772198	CCTTTGTC
chr6	31350542	31350543	chr6:31350543:C:T	rs56280537	C	T	C	Sox2_MA0143.3	16	0	-	0	0	.
chr6	31350843	31350844	chr6:31350844:T:A	rs9266042	T	A	T	Sox2_MA0143.3	4	1	+	8.676919043985553	1.7681642646703322	CCATTGTG
chr6	31350852	31350853	chr6:31350853:A:G	rs9266043	A	G	G	Sox2_MA0143.3	13	0	+	0	0	.
chr6	31353152	31353153	chr6:31353153:C:G	rs77616974	C	G	C	Sox2_MA0143.3	5	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr6	31353701	31353702	chr6:31353702:A:G	rs72502570	A	G	A	Sox2_MA0143.3	21	0	-	0	0	.
chr6	31353723	31353724	chr6:31353724:A:G	rs73406410	A	G	A	Sox2_MA0143.3	-1	0	-	0	0	.
chr6	31353741	31353742	chr6:31353742:G:A	rs2395474	G	A	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr6	31354248	31354249	chr6:31354249:C:A	rs1054111	C	A	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr6	31378776	31378777	chr6:31378777:G:C	rs4959072	G	C	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr6	31382041	31382042	chr6:31382042:C:A	rs9266721	C	A	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr6	31394917	31394918	chr6:31394918:T:C	rs200525109	T	C	T	Sox2_MA0143.3	-17	0	+	0	0	.
chr6	31410018	31410019	chr6:31410019:G:A	rs76175444	G	A	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr6	31410039	31410040	chr6:31410040:T:C	rs2848714	T	C	C	Sox2_MA0143.3	2	1	+	8.864090315184848	2.5582713367092715	CCTTTGTG
chr6	31426501	31426502	chr6:31426502:T:C	rs113912664	T	C	-	Sox2_MA0143.3	6	1	+	9.206767037375712	2.298012258060492	CCTTTGTC
chr6	31472719	31472720	chr6:31472720:G:A	rs2516440	G	A	-	Sox2_MA0143.3	-16	0	+	0	0	.
chr6	31489566	31489567	chr6:31489567:G:A	rs3130913	G	A	-	Sox2_MA0143.3	-16	0	+	0	0	.
chr6	31489584	31489585	chr6:31489585:A:C	rs2904784	A	C	-	Sox2_MA0143.3	2	1	+	8.676919043985553	2.5582713367092715	CCATTGTG
chr6	31489607	31489608	chr6:31489608:T:C	rs2904782	T	C	-	Sox2_MA0143.3	25	0	+	0	0	.
chr6	31525807	31525808	chr6:31525808:T:A	rs3093985	T	A	A	Sox2_MA0143.3	15	0	-	0	0	.
chr6	31538432	31538433	chr6:31538433:G:A	rs3093974	G	A	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr6	31619783	31619784	chr6:31619784:G:C	rs2736176	G	C	G	Sox2_MA0143.3	1	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr6	31651962	31651963	chr6:31651963:G:T	rs1036225086	G	T	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr6	31737631	31737632	chr6:31737632:C:T	rs1268773026	C	T	C	Sox2_MA0143.3	10	0	+	0	0	.
chr6	31776370	31776371	chr6:31776371:C:T	rs114936741	C	T	C	Sox2_MA0143.3	-12	0	-	0	0	.
chr6	31820237	31820238	chr6:31820238:T:C	rs77488547	T	C	T	Sox2_MA0143.3	-9	0	+	0	0	.
chr6	31830172	31830173	chr6:31830173:T:A	rs34396430	T	A	T	Sox2_MA0143.3	20	0	-	0	0	.
chr6	31901312	31901313	chr6:31901313:G:C	rs556201424	G	C	G	Sox2_MA0143.3	11	0	+	0	0	.
chr6	31901344	31901345	chr6:31901345:G:A	rs45462992	G	A	G	Sox2_MA0143.3	13	0	-	0	0	.
chr6	31901357	31901358	chr6:31901358:G:A	rs12525922	G	A	G	Sox2_MA0143.3	0	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr6	31901376	31901377	chr6:31901377:C:G	rs45575537	C	G	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr6	31952577	31952578	chr6:31952578:A:G	rs567319420	A	G	G	Sox2_MA0143.3	24	0	+	0	0	.
chr6	32167359	32167360	chr6:32167360:G:A	rs41268924	G	A	G	Sox2_MA0143.3	23	0	+	0	0	.
chr6	32177427	32177428	chr6:32177428:C:T	rs3134947	C	T	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr6	32192082	32192083	chr6:32192083:G:A	rs117877134	G	A	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr6	32222250	32222251	chr6:32222251:A:G	rs3132946	A	G	G	Sox2_MA0143.3	26	0	-	0	0	.
chr6	32377276	32377277	chr6:32377277:T:G	rs116548543	T	G	t	Sox2_MA0143.3	-8	0	+	0	0	.
chr6	32394638	32394639	chr6:32394639:T:G	rs2076534	T	G	G	Sox2_MA0143.3	22	0	-	0	0	.
chr6	32474378	32474379	chr6:32474379:G:T	rs60545961	G	T	.	Sox2_MA0143.3	-11	0	+	0	0	.
chr6	32474379	32474380	chr6:32474380:T:C	rs6901373	T	C	.	Sox2_MA0143.3	-10	0	+	0	0	.
chr6	32474402	32474403	chr6:32474403:T:C	rs12197312	T	C	.	Sox2_MA0143.3	13	0	+	0	0	.
chr6	32551462	32551463	chr6:32551463:G:A	rs74210691	G	A	.	Sox2_MA0143.3	-15	0	-	0	0	.
chr6	32551484	32551485	chr6:32551485:A:G	rs68017248	A	G	.	Sox2_MA0143.3	-7	0	+	0	0	.
chr6	32551503	32551504	chr6:32551504:A:T	rs80290189	A	T	.	Sox2_MA0143.3	12	0	+	0	0	.
chr6	32604769	32604770	chr6:32604770:A:T	rs9270931	A	T	.	Sox2_MA0143.3	-6	0	+	0	0	.
chr6	32633649	32633650	chr6:32633650:C:G	rs9272178	C	G	.	Sox2_MA0143.3	-18	0	+	0	0	.
chr6	32633785	32633786	chr6:32633786:G:A	rs9272181	G	A	.	Sox2_MA0143.3	27	0	-	0	0	.
chr6	32633786	32633787	chr6:32633787:G:A	rs9272182	G	A	.	Sox2_MA0143.3	26	0	-	0	0	.
chr6	32635863	32635864	chr6:32635864:G:C	rs9272277	G	C	.	Sox2_MA0143.3	-15	0	+	0	0	.
chr6	32635882	32635883	chr6:32635883:T:C	rs1391373	T	C	.	Sox2_MA0143.3	4	1	+	9.800647049772198	2.8918922704569785	CCTTTGTT
chr6	32635890	32635891	chr6:32635891:A:C	rs1391372	A	C	.	Sox2_MA0143.3	12	0	+	0	0	.
chr6	32682946	32682947	chr6:32682947:A:G	rs17212076	A	G	a	Sox2_MA0143.3	22	0	+	0	0	.
chr6	32729541	32729542	chr6:32729542:G:A	rs9276121	G	A	A	Sox2_MA0143.3	27	0	-	0	0	.
chr6	32729562	32729563	chr6:32729563:A:G	rs2859118	A	G	A	Sox2_MA0143.3	6	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr6	32758799	32758800	chr6:32758800:G:T	rs3213483	G	T	.	Sox2_MA0143.3	-2	0	+	0	0	.
chr6	32798225	32798226	chr6:32798226:A:T	rs6937723	A	T	t	Sox2_MA0143.3	-4	0	-	0	0	.
chr6	32840454	32840455	chr6:32840455:A:G	rs3763349	A	G	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr6	32887588	32887589	chr6:32887589:C:T	rs7740317	C	T	T	Sox2_MA0143.3	-20	0	+	0	0	.
chr6	32941557	32941558	chr6:32941558:A:G	rs12206377	A	G	A	Sox2_MA0143.3	2	1	+	9.613475778572903	3.494828071296623	CCATTGTT
chr6	32943099	32943100	chr6:32943100:G:A	rs16871169	G	A	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr6	32944774	32944775	chr6:32944775:T:C	rs10484567	T	C	T	Sox2_MA0143.3	17	0	+	0	0	.
chr6	32974576	32974577	chr6:32974577:G:T	rs55669504	G	T	G	Sox2_MA0143.3	0	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr6	32974577	32974578	chr6:32974578:C:G	rs3918144	C	G	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr6	33008981	33008982	chr6:33008982:G:T	rs86567	G	T	T	Sox2_MA0143.3	-1	0	-	0	0	.
chr6	33028439	33028440	chr6:33028440:G:A	rs6934257	G	A	A	Sox2_MA0143.3	-15	0	+	0	0	.
chr6	33091826	33091827	chr6:33091827:C:T	rs9500935	C	T	c	Sox2_MA0143.3	-17	0	-	0	0	.
chr6	33111988	33111989	chr6:33111989:A:G	rs6937034	A	G	A	Sox2_MA0143.3	6	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr6	33117756	33117757	chr6:33117757:T:C	rs72873014	T	C	T	Sox2_MA0143.3	8	0	+	0	0	.
chr6	33117765	33117766	chr6:33117766:T:C	rs9277667	T	C	T	Sox2_MA0143.3	17	0	+	0	0	.
chr6	33124054	33124055	chr6:33124055:T:C	rs3117022	T	C	T	Sox2_MA0143.3	20	0	-	0	0	.
chr6	33128977	33128978	chr6:33128978:A:G	rs3117005	A	G	G	Sox2_MA0143.3	6	1	-	9.019595766176417	2.110840986861197	CCATTGTC
chr6	33128988	33128989	chr6:33128989:A:G	rs3117004	A	G	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr6	33128998	33128999	chr6:33128999:C:T	rs56217718	C	T	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr6	33136508	33136509	chr6:33136509:G:A	rs9366817	G	A	A	Sox2_MA0143.3	-11	0	+	0	0	.
chr6	33137435	33137436	chr6:33137436:C:A	rs3129260	C	A	C	Sox2_MA0143.3	13	0	-	0	0	.
chr6	33139683	33139684	chr6:33139684:G:A	rs4711319	G	A	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr6	33156915	33156916	chr6:33156916:G:C	rs3130159	G	C	G	Sox2_MA0143.3	1	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr6	33156935	33156936	chr6:33156936:C:T	rs114204815	C	T	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr6	33161901	33161902	chr6:33161902:C:T	rs758925438	C	T	C	Sox2_MA0143.3	12	0	-	0	0	.
chr6	33234849	33234850	chr6:33234850:G:A	rs114886963	G	A	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr6	33276938	33276939	chr6:33276939:G:C	rs463302	G	C	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr6	33313594	33313595	chr6:33313595:A:C	chr6:33313595:A:C	A	C	A	Sox2_MA0143.3	2	1	-	3.5547341015215945	-2.751084876953981	CCTTTGTA
chr6	33363122	33363123	chr6:33363123:G:A	rs3130274	G	A	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr6	33498781	33498782	chr6:33498782:C:T	rs56002904	C	T	C	Sox2_MA0143.3	-5	0	-	0	0	.
chr6	33533152	33533153	chr6:33533153:G:C	rs55782090	G	C	g	Sox2_MA0143.3	-13	0	+	0	0	.
chr6	33560325	33560326	chr6:33560326:T:C	rs62407561	T	C	t	Sox2_MA0143.3	-4	0	-	0	0	.
chr6	33568008	33568009	chr6:33568009:C:T	rs62407566	C	T	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr6	33607231	33607232	chr6:33607232:G:A	rs444697	G	A	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr6	33687395	33687396	chr6:33687396:T:C	rs2281916	T	C	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr6	33699882	33699883	chr6:33699883:C:T	rs73743305	C	T	C	Sox2_MA0143.3	24	0	-	0	0	.
chr6	33734301	33734302	chr6:33734302:C:T	rs608971	C	T	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr6	33787933	33787934	chr6:33787934:G:C	rs756138	G	C	C	Sox2_MA0143.3	0	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr6	33814331	33814332	chr6:33814332:C:T	rs77080151	C	T	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr6	33852009	33852010	chr6:33852010:C:A	rs142767404	C	A	C	Sox2_MA0143.3	24	0	+	0	0	.
chr6	33869374	33869375	chr6:33869375:A:G	rs4711362	A	G	A	Sox2_MA0143.3	-3	0	+	0	0	.
chr6	33885941	33885942	chr6:33885942:T:C	rs6935041	T	C	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr6	33886487	33886488	chr6:33886488:G:A	rs139123565	G	A	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr6	33907699	33907700	chr6:33907700:G:A	rs56334904	G	A	G	Sox2_MA0143.3	0	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr6	33924144	33924145	chr6:33924145:G:A	rs2477230	G	A	G	Sox2_MA0143.3	22	0	-	0	0	.
chr6	34009642	34009643	chr6:34009643:T:C	rs9296110	T	C	C	Sox2_MA0143.3	2	1	-	8.676919043985553	2.5582713367092715	CCATTGTG
chr6	34045613	34045614	chr6:34045614:G:A	rs9469694	G	A	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr6	34165822	34165823	chr6:34165823:C:G	rs4713753	C	G	G	Sox2_MA0143.3	11	0	+	0	0	.
chr6	34240412	34240413	chr6:34240413:T:C	rs73744859	T	C	C	Sox2_MA0143.3	14	0	+	0	0	.
chr6	34256233	34256234	chr6:34256234:A:G	rs9394202	A	G	g	Sox2_MA0143.3	6	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr6	34256256	34256257	chr6:34256257:C:T	rs9469750	C	T	c	Sox2_MA0143.3	-17	0	-	0	0	.
chr6	34284574	34284575	chr6:34284575:C:T	rs6691	C	T	C	Sox2_MA0143.3	5	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr6	34349570	34349571	chr6:34349571:T:G	rs75029026	T	G	T	Sox2_MA0143.3	12	0	-	0	0	.
chr6	34391814	34391815	chr6:34391815:G:A	rs936093676	G	A	G	Sox2_MA0143.3	27	0	-	0	0	.
chr6	34391858	34391859	chr6:34391859:G:A	rs546744700	G	A	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr6	34425497	34425498	chr6:34425498:G:C	rs28671566	G	C	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr6	34425498	34425499	chr6:34425499:G:A	rs73744899	G	A	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr6	34524861	34524862	chr6:34524862:T:C	rs74836873	T	C	C	Sox2_MA0143.3	12	0	+	0	0	.
chr6	34526622	34526623	chr6:34526623:T:C	rs144744128	T	C	T	Sox2_MA0143.3	2	1	+	8.864090315184848	2.5582713367092715	CCTTTGTG
chr6	34731545	34731546	chr6:34731546:A:C	rs932029780	A	C	A	Sox2_MA0143.3	-5	0	-	0	0	.
chr6	34746544	34746545	chr6:34746545:A:G	rs2764208	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr6	34960041	34960042	chr6:34960042:G:A	rs75849803	G	A	A	Sox2_MA0143.3	7	1	+	8.864090315184848	3.5547341015215945	CCTTTGTG
chr6	35048179	35048180	chr6:35048180:G:A	rs73403834	G	A	G	Sox2_MA0143.3	17	0	+	0	0	.
chr6	35127253	35127254	chr6:35127254:A:G	rs6926532	A	G	A	Sox2_MA0143.3	22	0	-	0	0	.
chr6	35127259	35127260	chr6:35127260:T:C	rs6906666	T	C	t	Sox2_MA0143.3	16	0	-	0	0	.
chr6	35263390	35263391	chr6:35263391:T:G	rs9462065	T	G	T	Sox2_MA0143.3	4	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr6	35391925	35391926	chr6:35391926:T:C	rs113294284	T	C	T	Sox2_MA0143.3	-13	0	+	0	0	.
chr6	35418263	35418264	chr6:35418264:A:G	rs9462082	A	G	N	Sox2_MA0143.3	10	0	-	0	0	.
chr6	35429680	35429681	chr6:35429681:T:C	rs7749664	T	C	T	Sox2_MA0143.3	10	0	-	0	0	.
chr6	35522705	35522706	chr6:35522706:C:G	rs543445813	C	G	c	Sox2_MA0143.3	16	0	-	0	0	.
chr6	35642973	35642974	chr6:35642974:A:T	rs12527329	A	T	A	Sox2_MA0143.3	7	1	-	9.800647049772198	3.5547341015215945	CCTTTGTT
chr6	35727148	35727149	chr6:35727149:G:A	rs10947565	G	A	G	Sox2_MA0143.3	15	0	-	0	0	.
chr6	35727155	35727156	chr6:35727156:G:A	rs140967114	G	A	G	Sox2_MA0143.3	8	0	-	0	0	.
chr6	35737364	35737365	chr6:35737365:A:G	rs12193672	A	G	A	Sox2_MA0143.3	-11	0	+	0	0	.
chr6	35833706	35833707	chr6:35833707:C:T	rs75579999	C	T	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr6	35937189	35937190	chr6:35937190:T:C	rs113609749	T	C	C	Sox2_MA0143.3	3	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr6	36038442	36038443	chr6:36038443:G:A	rs851023	G	A	A	Sox2_MA0143.3	5	1	+	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr6	36061377	36061378	chr6:36061378:G:C	rs2145362	G	C	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr6	36066088	36066089	chr6:36066089:G:A	rs75623583	G	A	G	Sox2_MA0143.3	13	0	-	0	0	.
chr6	36114795	36114796	chr6:36114796:C:A	rs7770183	C	A	C	Sox2_MA0143.3	16	0	+	0	0	.
chr6	36239795	36239796	chr6:36239796:C:T	rs16868735	C	T	c	Sox2_MA0143.3	22	0	-	0	0	.
chr6	36239820	36239821	chr6:36239821:A:G	rs9380559	A	G	G	Sox2_MA0143.3	-3	0	-	0	0	.
chr6	36355901	36355902	chr6:36355902:G:T	rs72848600	G	T	g	Sox2_MA0143.3	-3	0	-	0	0	.
chr6	36376940	36376941	chr6:36376941:G:C	rs73729968	G	C	G	Sox2_MA0143.3	22	0	+	0	0	.
chr6	36406016	36406017	chr6:36406017:C:A	rs6457912	C	A	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr6	36430524	36430525	chr6:36430525:A:G	rs544267	A	G	g	Sox2_MA0143.3	-15	0	-	0	0	.
chr6	36442530	36442531	chr6:36442531:G:C	rs4711451	G	C	g	Sox2_MA0143.3	15	0	+	0	0	.
chr6	36443182	36443183	chr6:36443183:A:C	chr6:36443183:A:C	A	C	a	Sox2_MA0143.3	-7	0	+	0	0	.
chr6	36573544	36573545	chr6:36573545:G:A	rs606781	G	A	-	Sox2_MA0143.3	20	0	+	0	0	.
chr6	36579878	36579879	chr6:36579879:G:C	rs189520651	G	C	G	Sox2_MA0143.3	17	0	-	0	0	.
chr6	36588952	36588953	chr6:36588953:T:C	rs9380582	T	C	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr6	36610728	36610729	chr6:36610729:T:C	rs73408383	T	C	C	Sox2_MA0143.3	4	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr6	36654535	36654536	chr6:36654536:C:T	rs12210094	C	T	C	Sox2_MA0143.3	26	0	-	0	0	.
chr6	36683840	36683841	chr6:36683841:A:G	rs751356773	A	G	A	Sox2_MA0143.3	-9	0	+	0	0	.
chr6	36804766	36804767	chr6:36804767:A:G	rs9296197	A	G	A	Sox2_MA0143.3	27	0	-	0	0	.
chr6	36948242	36948243	chr6:36948243:T:C	rs4711475	T	C	C	Sox2_MA0143.3	13	0	+	0	0	.
chr6	36955338	36955339	chr6:36955339:C:T	rs62406522	C	T	C	Sox2_MA0143.3	12	0	+	0	0	.
chr6	36976777	36976778	chr6:36976778:C:T	rs3778024	C	T	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr6	36980438	36980439	chr6:36980439:T:C	rs73422783	T	C	T	Sox2_MA0143.3	2	1	-	8.676919043985553	2.5582713367092715	CCATTGTG
chr6	37002794	37002795	chr6:37002795:C:A	rs2770123	C	A	C	Sox2_MA0143.3	20	0	+	0	0	.
chr6	37033679	37033680	chr6:37033680:A:C	rs831484	A	C	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr6	37128170	37128171	chr6:37128171:T:C	rs4711485	T	C	C	Sox2_MA0143.3	22	0	+	0	0	.
chr6	37202645	37202646	chr6:37202646:G:A	rs17570917	G	A	G	Sox2_MA0143.3	13	0	+	0	0	.
chr6	37202914	37202915	chr6:37202915:C:T	rs2788076	C	T	C	Sox2_MA0143.3	11	0	+	0	0	.
chr6	37212359	37212360	chr6:37212360:G:C	rs1055460	G	C	G	Sox2_MA0143.3	-3	0	+	0	0	.
chr6	37213613	37213614	chr6:37213614:G:A	rs116171482	G	A	G	Sox2_MA0143.3	7	1	+	8.676919043985553	3.3675628303222993	CCATTGTG
chr6	37424542	37424543	chr6:37424543:G:A	rs56182093	G	A	G	Sox2_MA0143.3	-9	0	+	0	0	.
chr6	37480986	37480987	chr6:37480987:G:A	rs112485104	G	A	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr6	37500339	37500340	chr6:37500340:T:C	rs13203092	T	C	T	Sox2_MA0143.3	-5	0	+	0	0	.
chr6	37510013	37510014	chr6:37510014:T:C	rs78395285	T	C	T	Sox2_MA0143.3	-10	0	+	0	0	.
chr6	37512827	37512828	chr6:37512828:T:C	rs2797794	T	C	C	Sox2_MA0143.3	18	0	+	0	0	.
chr6	37512828	37512829	chr6:37512829:G:A	rs2776920	G	A	A	Sox2_MA0143.3	19	0	+	0	0	.
chr6	37513660	37513661	chr6:37513661:C:T	rs2797798	C	T	c	Sox2_MA0143.3	-17	0	-	0	0	.
chr6	37550792	37550793	chr6:37550793:G:A	rs2797785	G	A	A	Sox2_MA0143.3	23	0	+	0	0	.
chr6	37558826	37558827	chr6:37558827:G:A	rs6457995	G	A	A	Sox2_MA0143.3	-10	0	+	0	0	.
chr6	37575891	37575892	chr6:37575892:T:C	rs10947680	T	C	T	Sox2_MA0143.3	4	1	+	8.676919043985553	1.7681642646703322	CCATTGTG
chr6	37623409	37623410	chr6:37623410:G:A	rs56207016	G	A	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr6	37657913	37657914	chr6:37657914:T:C	rs13198513	T	C	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr6	37665731	37665732	chr6:37665732:C:T	rs4083720	C	T	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr6	37668577	37668578	chr6:37668578:T:C	rs9296229	T	C	T	Sox2_MA0143.3	-17	0	-	0	0	.
chr6	37707786	37707787	chr6:37707787:G:A	rs67748825	G	A	G	Sox2_MA0143.3	0	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr6	37880398	37880399	chr6:37880399:G:T	rs188989060	G	T	G	Sox2_MA0143.3	20	0	-	0	0	.
chr6	37966104	37966105	chr6:37966105:G:A	rs2645107	G	A	G	Sox2_MA0143.3	23	0	-	0	0	.
chr6	37987173	37987174	chr6:37987174:G:C	rs58236393	G	C	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr6	38137795	38137796	chr6:38137796:C:T	rs142268267	C	T	C	Sox2_MA0143.3	10	0	-	0	0	.
chr6	38152165	38152166	chr6:38152166:A:G	rs16890395	A	G	A	Sox2_MA0143.3	-3	0	-	0	0	.
chr6	38189365	38189366	chr6:38189366:T:C	rs16890428	T	C	T	Sox2_MA0143.3	3	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr6	38240031	38240032	chr6:38240032:G:A	rs57122655	G	A	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr6	38270774	38270775	chr6:38270775:G:C	rs9470847	G	C	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr6	38302723	38302724	chr6:38302724:G:C	rs9366952	G	C	G	Sox2_MA0143.3	13	0	-	0	0	.
chr6	38421524	38421525	chr6:38421525:G:A	rs2814899	G	A	A	Sox2_MA0143.3	11	0	+	0	0	.
chr6	38431026	38431027	chr6:38431027:C:T	rs4591850	C	T	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr6	38760365	38760366	chr6:38760366:A:C	rs1678677	A	C	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr6	38782765	38782766	chr6:38782766:G:A	rs72849921	G	A	A	Sox2_MA0143.3	-18	0	+	0	0	.
chr6	39066001	39066002	chr6:39066002:T:A	rs3765466	T	A	T	Sox2_MA0143.3	-16	0	-	0	0	.
chr6	39079641	39079642	chr6:39079642:C:T	rs12212036	C	T	C	Sox2_MA0143.3	19	0	+	0	0	.
chr6	39122640	39122641	chr6:39122641:C:A	rs184504	C	A	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr6	39178353	39178354	chr6:39178354:G:A	rs1155349	G	A	G	Sox2_MA0143.3	11	0	+	0	0	.
chr6	39195424	39195425	chr6:39195425:A:G	rs3778448	A	G	A	Sox2_MA0143.3	10	0	+	0	0	.
chr6	39209628	39209629	chr6:39209629:C:T	rs115905816	C	T	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr6	39214566	39214567	chr6:39214567:C:T	rs12524735	C	T	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr6	39215543	39215544	chr6:39215544:C:T	rs115981194	C	T	C	Sox2_MA0143.3	5	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr6	39233394	39233395	chr6:39233395:T:A	rs9369107	T	A	T	Sox2_MA0143.3	15	0	+	0	0	.
chr6	39260015	39260016	chr6:39260016:G:A	rs9380843	G	A	G	Sox2_MA0143.3	11	0	-	0	0	.
chr6	39281408	39281409	chr6:39281409:A:G	rs12211656	A	G	A	Sox2_MA0143.3	4	1	-	8.864090315184848	1.9553355358696274	CCTTTGTG
chr6	39281412	39281413	chr6:39281413:G:A	rs2758880	G	A	G	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr6	39291616	39291617	chr6:39291617:C:A	rs9367002	C	A	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr6	39297135	39297136	chr6:39297136:T:C	rs731419	T	C	C	Sox2_MA0143.3	6	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr6	39648727	39648728	chr6:39648728:C:T	rs114094375	C	T	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr6	39657877	39657878	chr6:39657878:C:G	rs2446647	C	G	G	Sox2_MA0143.3	0	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr6	39657887	39657888	chr6:39657888:A:T	rs13208338	A	T	A	Sox2_MA0143.3	10	0	+	0	0	.
chr6	39772406	39772407	chr6:39772407:C:G	rs302621	C	G	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr6	39772842	39772843	chr6:39772843:A:G	rs302619	A	G	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr6	39777659	39777660	chr6:39777660:C:G	rs9380893	C	G	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr6	39887650	39887651	chr6:39887651:C:T	rs3008810	C	T	C	Sox2_MA0143.3	-12	0	-	0	0	.
chr6	39899037	39899038	chr6:39899038:T:C	rs73732313	T	C	T	Sox2_MA0143.3	-2	0	-	0	0	.
chr6	39948362	39948363	chr6:39948363:G:T	rs147680569	G	T	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr6	40021246	40021247	chr6:40021247:G:C	rs4714287	G	C	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr6	40184475	40184476	chr6:40184476:A:G	rs819958	A	G	A	Sox2_MA0143.3	7	1	+	3.5547341015215945	8.864090315184848	CCTTTGTA
chr6	40184526	40184527	chr6:40184527:A:G	rs2689955	A	G	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr6	40229492	40229493	chr6:40229493:G:C	rs142731946	G	C	G	Sox2_MA0143.3	7	1	+	8.676919043985553	9.019595766176417	CCATTGTG
chr6	40260944	40260945	chr6:40260945:C:A	rs9462599	C	A	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr6	40276504	40276505	chr6:40276505:C:T	rs76520196	C	T	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr6	40286954	40286955	chr6:40286955:A:G	rs61372030	A	G	A	Sox2_MA0143.3	-11	0	+	0	0	.
chr6	40540653	40540654	chr6:40540654:A:G	rs6909218	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr6	40639619	40639620	chr6:40639620:A:G	rs9968933	A	G	A	Sox2_MA0143.3	21	0	+	0	0	.
chr6	40640768	40640769	chr6:40640769:C:T	rs9471386	C	T	T	Sox2_MA0143.3	25	0	-	0	0	.
chr6	40675510	40675511	chr6:40675511:T:C	rs16893897	T	C	C	Sox2_MA0143.3	-12	0	-	0	0	.
chr6	40855499	40855500	chr6:40855500:C:T	rs9394739	C	T	C	Sox2_MA0143.3	16	0	-	0	0	.
chr6	40961261	40961262	chr6:40961262:T:C	rs7739531	T	C	.	Sox2_MA0143.3	2	1	-	9.019595766176417	2.900948058900136	CCATTGTC
chr6	40997243	40997244	chr6:40997244:A:G	rs375981890	A	G	A	Sox2_MA0143.3	9	0	+	0	0	.
chr6	41045919	41045920	chr6:41045920:C:A	rs9462669	C	A	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr6	41066702	41066703	chr6:41066703:A:T	rs11556586	A	T	A	Sox2_MA0143.3	-2	0	+	0	0	.
chr6	41074106	41074107	chr6:41074107:G:T	rs182176178	G	T	T	Sox2_MA0143.3	-10	0	+	0	0	.
chr6	41161655	41161656	chr6:41161656:G:A	rs2234251	G	A	G	Sox2_MA0143.3	18	0	+	0	0	.
chr6	41276828	41276829	chr6:41276829:C:G	rs1817537	C	G	G	Sox2_MA0143.3	5	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr6	41279359	41279360	chr6:41279360:C:A	chr6:41279360:C:A	C	A	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr6	41475950	41475951	chr6:41475951:T:C	rs2477831	T	C	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr6	41504083	41504084	chr6:41504084:G:C	rs567921851	G	C	G	Sox2_MA0143.3	0	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr6	41607439	41607440	chr6:41607440:A:C	rs9471609	A	C	A	Sox2_MA0143.3	19	0	-	0	0	.
chr6	41618841	41618842	chr6:41618842:T:C	rs1028818	T	C	T	Sox2_MA0143.3	-17	0	+	0	0	.
chr6	41642074	41642075	chr6:41642075:C:G	rs75360801	C	G	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr6	41649356	41649357	chr6:41649357:G:A	rs72863081	G	A	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr6	41659009	41659010	chr6:41659010:G:T	rs9357365	G	T	A	Sox2_MA0143.3	21	0	-	0	0	.
chr6	41659030	41659031	chr6:41659031:G:C	rs78248170	G	C	G	Sox2_MA0143.3	0	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr6	41688989	41688990	chr6:41688990:C:T	rs2235836	C	T	T	Sox2_MA0143.3	-19	0	+	0	0	.
chr6	41689569	41689570	chr6:41689570:G:A	rs186105649	G	A	G	Sox2_MA0143.3	-2	0	+	0	0	.
chr6	41689589	41689590	chr6:41689590:A:G	rs2073156	A	G	G	Sox2_MA0143.3	18	0	+	0	0	.
chr6	41732922	41732923	chr6:41732923:G:T	rs147673411	G	T	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr6	41747899	41747900	chr6:41747900:C:T	rs114261268	C	T	C	Sox2_MA0143.3	25	0	+	0	0	.
chr6	41763942	41763943	chr6:41763943:C:A	rs57994687	C	A	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr6	41921933	41921934	chr6:41921934:G:C	rs41273800	G	C	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr6	41921934	41921935	chr6:41921935:G:T	rs41273802	G	T	g	Sox2_MA0143.3	-2	0	-	0	0	.
chr6	41965815	41965816	chr6:41965816:G:A	rs9357372	G	A	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr6	41965856	41965857	chr6:41965857:G:A	rs747281640	G	A	G	Sox2_MA0143.3	21	0	+	0	0	.
chr6	42017490	42017491	chr6:42017491:C:T	rs13204359	C	T	C	Sox2_MA0143.3	10	0	-	0	0	.
chr6	42048757	42048758	chr6:42048758:A:G	rs114882621	A	G	A	Sox2_MA0143.3	2	1	-	9.206767037375712	2.900948058900136	CCTTTGTC
chr6	42137495	42137496	chr6:42137496:C:T	rs75899170	C	T	C	Sox2_MA0143.3	16	0	-	0	0	.
chr6	42137496	42137497	chr6:42137497:G:A	rs115722087	G	A	G	Sox2_MA0143.3	15	0	-	0	0	.
chr6	42142736	42142737	chr6:42142737:G:T	rs1359900407	G	T	G	Sox2_MA0143.3	13	0	+	0	0	.
chr6	42200231	42200232	chr6:42200232:T:C	rs2180174	T	C	C	Sox2_MA0143.3	18	0	+	0	0	.
chr6	42239835	42239836	chr6:42239836:T:C	rs77392932	T	C	T	Sox2_MA0143.3	-16	0	-	0	0	.
chr6	42294788	42294789	chr6:42294789:T:C	rs114169915	T	C	T	Sox2_MA0143.3	3	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr6	42294811	42294812	chr6:42294812:T:C	rs9471835	T	C	C	Sox2_MA0143.3	26	0	+	0	0	.
chr6	42316731	42316732	chr6:42316732:T:A	rs656588	T	A	A	Sox2_MA0143.3	8	0	+	0	0	.
chr6	42316733	42316734	chr6:42316734:G:A	rs523676	G	A	A	Sox2_MA0143.3	10	0	+	0	0	.
chr6	42337195	42337196	chr6:42337196:G:A	rs56405937	G	A	G	Sox2_MA0143.3	7	1	-	9.019595766176417	9.613475778572903	CCATTGTC
chr6	42375176	42375177	chr6:42375177:C:T	rs94776	C	T	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr6	42389467	42389468	chr6:42389468:T:C	rs960257374	T	C	T	Sox2_MA0143.3	-12	0	+	0	0	.
chr6	42545372	42545373	chr6:42545373:G:A	rs9381191	G	A	G	Sox2_MA0143.3	21	0	+	0	0	.
chr6	42571798	42571799	chr6:42571799:G:A	rs115192568	G	A	G	Sox2_MA0143.3	10	0	-	0	0	.
chr6	42694637	42694638	chr6:42694638:C:G	rs79860252	C	G	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr6	42745876	42745877	chr6:42745877:C:T	rs139092352	C	T	C	Sox2_MA0143.3	9	0	-	0	0	.
chr6	42745879	42745880	chr6:42745880:A:G	rs2234026	A	G	G	Sox2_MA0143.3	6	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr6	42772255	42772256	chr6:42772256:A:G	rs73428430	A	G	A	Sox2_MA0143.3	16	0	+	0	0	.
chr6	42819974	42819975	chr6:42819975:G:A	rs141970235	G	A	G	Sox2_MA0143.3	8	0	-	0	0	.
chr6	42877202	42877203	chr6:42877203:T:C	rs181696405	T	C	T	Sox2_MA0143.3	12	0	+	0	0	.
chr6	42880091	42880092	chr6:42880092:G:T	rs72864269	G	T	g	Sox2_MA0143.3	-15	0	-	0	0	.
chr6	42880094	42880095	chr6:42880095:T:C	rs72864272	T	C	T	Sox2_MA0143.3	-18	0	-	0	0	.
chr6	43018234	43018235	chr6:43018235:T:C	rs6926418	T	C	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr6	43090648	43090649	chr6:43090649:G:A	rs192947338	G	A	G	Sox2_MA0143.3	23	0	-	0	0	.
chr6	43126488	43126489	chr6:43126489:C:G	rs182278549	C	G	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr6	43242371	43242372	chr6:43242372:C:T	rs9462880	C	T	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr6	43308948	43308949	chr6:43308949:A:G	rs73438386	A	G	A	Sox2_MA0143.3	20	0	-	0	0	.
chr6	43436772	43436773	chr6:43436773:G:A	rs9349256	G	A	G	Sox2_MA0143.3	5	1	+	9.206767037375712	2.298012258060492	CCTTTGTC
chr6	43469495	43469496	chr6:43469496:A:C	rs116157426	A	C	A	Sox2_MA0143.3	-6	0	+	0	0	.
chr6	43669905	43669906	chr6:43669906:G:A	rs144382118	G	A	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr6	43686798	43686799	chr6:43686799:G:C	rs833048	G	C	G	Sox2_MA0143.3	-3	0	-	0	0	.
chr6	43727035	43727036	chr6:43727036:A:G	rs9472112	A	G	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr6	43761529	43761530	chr6:43761530:G:A	rs79021145	G	A	G	Sox2_MA0143.3	9	0	-	0	0	.
chr6	43804837	43804838	chr6:43804838:A:G	rs115673667	A	G	A	Sox2_MA0143.3	17	0	-	0	0	.
chr6	43813354	43813355	chr6:43813355:T:G	rs36184164	T	G	T	Sox2_MA0143.3	9	0	-	0	0	.
chr6	43813375	43813376	chr6:43813376:G:A	rs77030860	G	A	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr6	43813380	43813381	chr6:43813381:A:G	rs73418203	A	G	A	Sox2_MA0143.3	-17	0	-	0	0	.
chr6	43817517	43817518	chr6:43817518:C:T	rs35349911	C	T	C	Sox2_MA0143.3	14	0	-	0	0	.
chr6	43841929	43841930	chr6:43841930:T:A	rs9472134	T	A	T	Sox2_MA0143.3	17	0	-	0	0	.
chr6	43869021	43869022	chr6:43869022:G:A	rs9472147	G	A	A	Sox2_MA0143.3	10	0	-	0	0	.
chr6	43893296	43893297	chr6:43893297:G:A	rs182746800	G	A	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr6	43904355	43904356	chr6:43904356:C:A	rs72863966	C	A	C	Sox2_MA0143.3	1	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr6	43926799	43926800	chr6:43926800:G:C	rs190763102	G	C	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr6	43926799	43926800	chr6:43926800:G:T	chr6:43926800:G:T	G	T	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr6	43948886	43948887	chr6:43948887:T:C	rs75804369	T	C	T	Sox2_MA0143.3	16	0	+	0	0	.
chr6	43964485	43964486	chr6:43964486:G:A	rs11757903	G	A	G	Sox2_MA0143.3	-14	0	+	0	0	.
chr6	43964495	43964496	chr6:43964496:C:T	rs11757868	C	T	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr6	43968468	43968469	chr6:43968469:C:T	rs80074328	C	T	T	Sox2_MA0143.3	17	0	+	0	0	.
chr6	43971193	43971194	chr6:43971194:A:G	rs9472179	A	G	A	Sox2_MA0143.3	-13	0	-	0	0	.
chr6	43979660	43979661	chr6:43979661:T:C	rs1740073	T	C	T	Sox2_MA0143.3	19	0	-	0	0	.
chr6	43983501	43983502	chr6:43983502:T:A	rs1740079	T	A	A	Sox2_MA0143.3	11	0	-	0	0	.
chr6	43991378	43991379	chr6:43991379:C:T	rs11966089	C	T	C	Sox2_MA0143.3	10	0	+	0	0	.
chr6	43998728	43998729	chr6:43998729:T:A	rs58191475	T	A	A	Sox2_MA0143.3	-4	0	+	0	0	.
chr6	44000478	44000479	chr6:44000479:C:T	rs16897113	C	T	C	Sox2_MA0143.3	12	0	-	0	0	.
chr6	44008012	44008013	chr6:44008013:G:A	rs73736909	G	A	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr6	44009462	44009463	chr6:44009463:A:G	rs73736912	A	G	A	Sox2_MA0143.3	-1	0	+	0	0	.
chr6	44042372	44042373	chr6:44042373:A:G	rs9381284	A	G	A	Sox2_MA0143.3	-10	0	-	0	0	.
chr6	44112190	44112191	chr6:44112191:G:A	rs4714747	G	A	A	Sox2_MA0143.3	-17	0	+	0	0	.
chr6	44112217	44112218	chr6:44112218:C:G	rs137933735	C	G	c	Sox2_MA0143.3	10	0	+	0	0	.
chr6	44139451	44139452	chr6:44139452:C:T	rs35174285	C	T	C	Sox2_MA0143.3	11	0	+	0	0	.
chr6	44139462	44139463	chr6:44139463:G:A	rs11967633	G	A	G	Sox2_MA0143.3	22	0	+	0	0	.
chr6	44178161	44178162	chr6:44178162:G:C	rs116655107	G	C	G	Sox2_MA0143.3	25	0	+	0	0	.
chr6	44234961	44234962	chr6:44234962:C:T	rs183651648	C	T	C	Sox2_MA0143.3	10	0	+	0	0	.
chr6	44298836	44298837	chr6:44298837:C:A	rs1056093	C	A	C	Sox2_MA0143.3	5	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr6	44303030	44303031	chr6:44303031:G:T	rs325002	G	T	G	Sox2_MA0143.3	24	0	-	0	0	.
chr6	44382288	44382289	chr6:44382289:A:G	rs9395011	A	G	A	Sox2_MA0143.3	10	0	-	0	0	.
chr6	44490539	44490540	chr6:44490540:A:G	rs116839518	A	G	A	Sox2_MA0143.3	-12	0	+	0	0	.
chr6	44583749	44583750	chr6:44583750:A:G	rs3997520	A	G	C	Sox2_MA0143.3	2	1	+	9.019595766176417	2.900948058900136	CCATTGTC
chr6	44642011	44642012	chr6:44642012:C:T	rs112556791	C	T	C	Sox2_MA0143.3	1	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr6	44679423	44679424	chr6:44679424:T:C	rs140381755	T	C	t	Sox2_MA0143.3	14	0	+	0	0	.
chr6	44784386	44784387	chr6:44784387:C:T	rs9463039	C	T	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr6	44808398	44808399	chr6:44808399:T:G	rs4644056	T	G	T	Sox2_MA0143.3	24	0	+	0	0	.
chr6	44921307	44921308	chr6:44921308:C:T	rs10456119	C	T	C	Sox2_MA0143.3	23	0	+	0	0	.
chr6	44968943	44968944	chr6:44968944:G:A	rs13216116	G	A	G	Sox2_MA0143.3	5	1	+	9.206767037375712	2.298012258060492	CCTTTGTC
chr6	44989626	44989627	chr6:44989627:G:A	rs75150960	G	A	G	Sox2_MA0143.3	8	0	-	0	0	.
chr6	45188044	45188045	chr6:45188045:C:A	rs1797145	C	A	A	Sox2_MA0143.3	12	0	+	0	0	.
chr6	45372113	45372114	chr6:45372114:T:C	rs16873379	T	C	T	Sox2_MA0143.3	15	0	-	0	0	.
chr6	45476520	45476521	chr6:45476521:A:G	rs2819866	A	G	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr6	45486956	45486957	chr6:45486957:T:C	rs115587374	T	C	T	Sox2_MA0143.3	19	0	-	0	0	.
chr6	45607919	45607920	chr6:45607920:G:A	rs78209176	G	A	.	Sox2_MA0143.3	8	0	-	0	0	.
chr6	45621225	45621226	chr6:45621226:A:G	rs73738524	A	G	A	Sox2_MA0143.3	12	0	-	0	0	.
chr6	45631456	45631457	chr6:45631457:A:G	rs114457085	A	G	A	Sox2_MA0143.3	-11	0	+	0	0	.
chr6	45631470	45631471	chr6:45631471:T:C	rs73735403	T	C	T	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr6	45633732	45633733	chr6:45633733:G:A	rs7746733	G	A	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr6	45682416	45682417	chr6:45682417:T:C	rs1388244	T	C	t	Sox2_MA0143.3	-6	0	+	0	0	.
chr6	45704446	45704447	chr6:45704447:T:A	rs10948248	T	A	T	Sox2_MA0143.3	-16	0	+	0	0	.
chr6	45707613	45707614	chr6:45707614:T:C	rs9472556	T	C	T	Sox2_MA0143.3	-16	0	+	0	0	.
chr6	45921069	45921070	chr6:45921070:T:C	rs3798258	T	C	T	Sox2_MA0143.3	23	0	-	0	0	.
chr6	45921170	45921171	chr6:45921171:G:T	rs3798259	G	T	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr6	45960119	45960120	chr6:45960120:C:A	rs1001938	C	A	A	Sox2_MA0143.3	-12	0	+	0	0	.
chr6	45965959	45965960	chr6:45965960:G:A	rs77822539	G	A	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr6	45970891	45970892	chr6:45970892:G:A	rs1212565	G	A	G	Sox2_MA0143.3	25	0	-	0	0	.
chr6	45983089	45983090	chr6:45983090:G:T	rs3798267	G	T	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr6	46079411	46079412	chr6:46079412:T:C	rs9472684	T	C	T	Sox2_MA0143.3	-7	0	-	0	0	.
chr6	46094643	46094644	chr6:46094644:C:A	rs6458488	C	A	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr6	46100400	46100401	chr6:46100401:C:G	rs7759506	C	G	G	Sox2_MA0143.3	10	0	+	0	0	.
chr6	46137592	46137593	chr6:46137593:T:A	rs75398435	T	A	T	Sox2_MA0143.3	19	0	+	0	0	.
chr6	46216583	46216584	chr6:46216584:A:T	rs9395165	A	T	A	Sox2_MA0143.3	25	0	+	0	0	.
chr6	46301643	46301644	chr6:46301644:A:G	rs77539790	A	G	A	Sox2_MA0143.3	20	0	-	0	0	.
chr6	46453333	46453334	chr6:46453334:C:T	rs147586237	C	T	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr6	46490098	46490099	chr6:46490099:A:G	rs4711853	A	G	A	Sox2_MA0143.3	16	0	-	0	0	.
chr6	46628548	46628549	chr6:46628549:A:C	rs3799866	A	C	A	Sox2_MA0143.3	18	0	-	0	0	.
chr6	46733299	46733300	chr6:46733300:C:A	rs9296509	C	A	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr6	46734610	46734611	chr6:46734611:A:G	rs918300	A	G	a	Sox2_MA0143.3	-12	0	+	0	0	.
chr6	46771725	46771726	chr6:46771726:T:C	rs145308520	T	C	T	Sox2_MA0143.3	16	0	+	0	0	.
chr6	46788897	46788898	chr6:46788898:T:A	rs57235798	T	A	T	Sox2_MA0143.3	7	1	-	3.5547341015215945	9.800647049772198	CCTTTGTA
chr6	46856541	46856542	chr6:46856542:A:G	rs526123	A	G	A	Sox2_MA0143.3	7	1	-	9.613475778572903	9.019595766176417	CCATTGTT
chr6	46864034	46864035	chr6:46864035:T:G	rs630033	T	G	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr6	46983927	46983928	chr6:46983928:C:T	rs4714979	C	T	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr6	46993995	46993996	chr6:46993996:A:C	rs77711327	A	C	C	Sox2_MA0143.3	17	0	-	0	0	.
chr6	47073158	47073159	chr6:47073159:G:A	rs819510	G	A	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr6	47132749	47132750	chr6:47132750:C:T	rs62401856	C	T	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr6	47146672	47146673	chr6:47146673:A:G	rs9296529	A	G	A	Sox2_MA0143.3	-15	0	+	0	0	.
chr6	47168473	47168474	chr6:47168474:T:C	rs138861135	T	C	T	Sox2_MA0143.3	14	0	-	0	0	.
chr6	47235588	47235589	chr6:47235589:G:A	rs754980073	G	A	G	Sox2_MA0143.3	14	0	+	0	0	.
chr6	47247177	47247178	chr6:47247178:G:A	rs58090196	G	A	A	Sox2_MA0143.3	9	0	+	0	0	.
chr6	47309954	47309955	chr6:47309955:C:T	rs13205450	C	T	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr6	47344161	47344162	chr6:47344162:T:C	rs10948347	T	C	T	Sox2_MA0143.3	9	0	+	0	0	.
chr6	47361286	47361287	chr6:47361287:C:A	rs62400763	C	A	C	Sox2_MA0143.3	9	0	-	0	0	.
chr6	47414641	47414642	chr6:47414642:T:C	rs2210711	T	C	C	Sox2_MA0143.3	3	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr6	47701043	47701044	chr6:47701044:A:C	rs1928464	A	C	A	Sox2_MA0143.3	22	0	+	0	0	.
chr6	47701044	47701045	chr6:47701045:G:A	rs555796331	G	A	G	Sox2_MA0143.3	23	0	+	0	0	.
chr6	47729043	47729044	chr6:47729044:C:T	rs2282337	C	T	C	Sox2_MA0143.3	25	0	+	0	0	.
chr6	47740694	47740695	chr6:47740695:G:A	rs965323	G	A	A	Sox2_MA0143.3	5	1	+	9.613475778572903	2.7047209992576837	CCATTGTT
chr6	47781040	47781041	chr6:47781041:A:C	rs2894743	A	C	C	Sox2_MA0143.3	6	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr6	47852765	47852766	chr6:47852766:C:T	rs75032625	C	T	C	Sox2_MA0143.3	7	1	-	8.864090315184848	3.5547341015215945	CCTTTGTG
chr6	47852789	47852790	chr6:47852790:T:C	rs517226	T	C	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr6	47925678	47925679	chr6:47925679:G:T	rs763753927	G	T	G	Sox2_MA0143.3	-16	0	-	0	0	.
chr6	47989388	47989389	chr6:47989389:A:G	rs12214094	A	G	-	Sox2_MA0143.3	9	0	-	0	0	.
chr6	48045064	48045065	chr6:48045065:C:A	rs75067380	C	A	C	Sox2_MA0143.3	8	0	-	0	0	.
chr6	48048615	48048616	chr6:48048616:G:A	rs332557	G	A	G	Sox2_MA0143.3	13	0	+	0	0	.
chr6	48110446	48110447	chr6:48110447:G:C	rs114680562	G	C	G	Sox2_MA0143.3	17	0	-	0	0	.
chr6	48113581	48113582	chr6:48113582:C:T	rs6458601	C	T	T	Sox2_MA0143.3	-17	0	+	0	0	.
chr6	48355839	48355840	chr6:48355840:A:C	rs325033	A	C	A	Sox2_MA0143.3	14	0	+	0	0	.
chr6	48418769	48418770	chr6:48418770:G:T	rs542962464	G	T	G	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr6	48553868	48553869	chr6:48553869:G:A	rs9381659	G	A	G	Sox2_MA0143.3	26	0	-	0	0	.
chr6	48729025	48729026	chr6:48729026:T:C	rs9473468	T	C	T	Sox2_MA0143.3	-2	0	-	0	0	.
chr6	48730092	48730093	chr6:48730093:G:A	rs12191924	G	A	G	Sox2_MA0143.3	0	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr6	48977880	48977881	chr6:48977881:T:G	rs7774112	T	G	G	Sox2_MA0143.3	27	0	-	0	0	.
chr6	49004970	49004971	chr6:49004971:C:G	rs12199437	C	G	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr6	49385643	49385644	chr6:49385644:C:A	rs9473541	C	A	C	Sox2_MA0143.3	19	0	+	0	0	.
chr6	49483162	49483163	chr6:49483163:C:T	rs979639488	C	T	-	Sox2_MA0143.3	-8	0	-	0	0	.
chr6	49485958	49485959	chr6:49485959:A:T	rs2448704	A	T	A	Sox2_MA0143.3	7	1	+	3.5547341015215945	9.800647049772198	CCTTTGTA
chr6	49570005	49570006	chr6:49570006:T:C	rs17663738	T	C	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr6	49570023	49570024	chr6:49570024:A:G	rs17663744	A	G	A	Sox2_MA0143.3	13	0	+	0	0	.
chr6	50031120	50031121	chr6:50031121:G:A	rs1330745891	G	A	G	Sox2_MA0143.3	-9	0	+	0	0	.
chr6	50031135	50031136	chr6:50031136:T:A	rs9463565	T	A	T	Sox2_MA0143.3	6	1	+	9.613475778572903	2.7047209992576837	CCATTGTT
chr6	50203495	50203496	chr6:50203496:T:G	rs6914600	T	G	T	Sox2_MA0143.3	2	1	-	9.019595766176417	2.900948058900136	CCATTGTC
chr6	50234237	50234238	chr6:50234238:T:C	rs12528705	T	C	T	Sox2_MA0143.3	-3	0	-	0	0	.
chr6	50271480	50271481	chr6:50271481:C:T	rs78710009	C	T	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr6	50355138	50355139	chr6:50355139:T:G	rs9349536	T	G	G	Sox2_MA0143.3	6	1	+	9.613475778572903	2.7047209992576837	CCATTGTT
chr6	50438206	50438207	chr6:50438207:C:T	rs1492620	C	T	C	Sox2_MA0143.3	14	0	-	0	0	.
chr6	50442593	50442594	chr6:50442594:G:T	rs7758661	G	T	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr6	50591557	50591558	chr6:50591558:C:A	rs2022278	C	A	C	Sox2_MA0143.3	5	1	-	9.613475778572903	2.7047209992576837	CCATTGTT
chr6	50815961	50815962	chr6:50815962:G:A	rs114030855	G	A	G	Sox2_MA0143.3	20	0	+	0	0	.
chr6	50842063	50842064	chr6:50842064:T:C	rs2817416	T	C	T	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr6	50842073	50842074	chr6:50842074:A:G	rs3798526	A	G	A	Sox2_MA0143.3	13	0	+	0	0	.
chr6	50848140	50848141	chr6:50848141:A:G	rs7750618	A	G	A	Sox2_MA0143.3	19	0	-	0	0	.
chr6	50849363	50849364	chr6:50849364:C:G	rs2817421	C	G	G	Sox2_MA0143.3	18	0	+	0	0	.
chr6	50864795	50864796	chr6:50864796:T:C	rs115839027	T	C	T	Sox2_MA0143.3	27	0	-	0	0	.
chr6	50921766	50921767	chr6:50921767:A:C	rs1738555	A	C	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr6	51050355	51050356	chr6:51050356:C:A	rs12211462	C	A	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr6	51265119	51265120	chr6:51265120:G:A	rs539247872	G	A	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr6	51323128	51323129	chr6:51323129:C:T	rs13197622	C	T	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr6	51812123	51812124	chr6:51812124:C:A	rs6906626	C	A	C	Sox2_MA0143.3	0	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr6	51934343	51934344	chr6:51934344:G:T	rs116186175	G	T	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr6	51938100	51938101	chr6:51938101:C:T	rs1271027	C	T	C	Sox2_MA0143.3	22	0	+	0	0	.
chr6	52154149	52154150	chr6:52154150:C:T	rs7748923	C	T	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr6	52160894	52160895	chr6:52160895:A:G	rs9357726	A	G	A	Sox2_MA0143.3	-12	0	-	0	0	.
chr6	52201387	52201388	chr6:52201388:G:A	rs1334949	G	A	G	Sox2_MA0143.3	9	0	-	0	0	.
chr6	52234228	52234229	chr6:52234229:G:C	rs189092751	G	C	G	Sox2_MA0143.3	0	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr6	52407627	52407628	chr6:52407628:C:T	rs116301436	C	T	C	Sox2_MA0143.3	9	0	+	0	0	.
chr6	52407638	52407639	chr6:52407639:G:A	rs140250304	G	A	G	Sox2_MA0143.3	20	0	+	0	0	.
chr6	52419446	52419447	chr6:52419447:T:C	rs78157248	T	C	T	Sox2_MA0143.3	-17	0	-	0	0	.
chr6	52454782	52454783	chr6:52454783:T:A	rs9463790	T	A	T	Sox2_MA0143.3	25	0	+	0	0	.
chr6	52499471	52499472	chr6:52499472:G:A	rs6458841	G	A	g	Sox2_MA0143.3	-11	0	-	0	0	.
chr6	52528610	52528611	chr6:52528611:G:A	rs12211221	G	A	G	Sox2_MA0143.3	10	0	-	0	0	.
chr6	52568675	52568676	chr6:52568676:T:C	rs74736166	T	C	T	Sox2_MA0143.3	18	0	+	0	0	.
chr6	52588311	52588312	chr6:52588312:C:T	rs34226460	C	T	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr6	52643320	52643321	chr6:52643321:A:T	rs7746472	A	T	A	Sox2_MA0143.3	-13	0	-	0	0	.
chr6	52643326	52643327	chr6:52643327:A:T	rs6458847	A	T	T	Sox2_MA0143.3	-19	0	-	0	0	.
chr6	52691972	52691973	chr6:52691973:T:C	rs11969858	T	C	T	Sox2_MA0143.3	14	0	-	0	0	.
chr6	52691990	52691991	chr6:52691991:A:C	rs1998040	A	C	A	Sox2_MA0143.3	-4	0	-	0	0	.
chr6	52745785	52745786	chr6:52745786:T:C	rs2207949	T	C	c	Sox2_MA0143.3	11	0	-	0	0	.
chr6	52822118	52822119	chr6:52822119:T:A	rs4715338	T	A	t	Sox2_MA0143.3	10	0	+	0	0	.
chr6	52877968	52877969	chr6:52877969:G:C	rs9382153	G	C	g	Sox2_MA0143.3	24	0	+	0	0	.
chr6	52919532	52919533	chr6:52919533:G:T	rs637793	G	T	g	Sox2_MA0143.3	27	0	+	0	0	.
chr6	53115323	53115324	chr6:53115324:A:G	rs78584628	A	G	A	Sox2_MA0143.3	-9	0	+	0	0	.
chr6	53192703	53192704	chr6:53192704:A:C	rs56694610	A	C	A	Sox2_MA0143.3	17	0	+	0	0	.
chr6	53202389	53202390	chr6:53202390:A:T	rs2816379	A	T	T	Sox2_MA0143.3	-15	0	+	0	0	.
chr6	53211117	53211118	chr6:53211118:T:A	rs11755105	T	A	T	Sox2_MA0143.3	-10	0	+	0	0	.
chr6	53300996	53300997	chr6:53300997:T:A	rs73742923	T	A	T	Sox2_MA0143.3	-18	0	-	0	0	.
chr6	53348984	53348985	chr6:53348985:T:A	rs117558994	T	A	T	Sox2_MA0143.3	19	0	-	0	0	.
chr6	53353700	53353701	chr6:53353701:A:G	rs7759179	A	G	A	Sox2_MA0143.3	-12	0	-	0	0	.
chr6	53359131	53359132	chr6:53359132:A:G	rs904976757	A	G	A	Sox2_MA0143.3	-4	0	+	0	0	.
chr6	53359145	53359146	chr6:53359146:C:T	rs145707933	C	T	C	Sox2_MA0143.3	10	0	+	0	0	.
chr6	53483760	53483761	chr6:53483761:C:T	rs73439622	C	T	C	Sox2_MA0143.3	-12	0	-	0	0	.
chr6	53543724	53543725	chr6:53543725:A:C	rs17878942	A	C	A	Sox2_MA0143.3	26	0	-	0	0	.
chr6	53605708	53605709	chr6:53605709:G:A	rs9349679	G	A	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr6	53646216	53646217	chr6:53646217:C:T	rs4715409	C	T	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr6	53650960	53650961	chr6:53650961:A:C	rs12697951	A	C	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr6	53738194	53738195	chr6:53738195:C:T	rs72941941	C	T	C	Sox2_MA0143.3	27	0	+	0	0	.
chr6	53753721	53753722	chr6:53753722:T:C	rs9474647	T	C	C	Sox2_MA0143.3	13	0	-	0	0	.
chr6	53875251	53875252	chr6:53875252:C:G	rs78499862	C	G	C	Sox2_MA0143.3	17	0	-	0	0	.
chr6	53991781	53991782	chr6:53991782:C:T	rs1610335	C	T	C	Sox2_MA0143.3	27	0	+	0	0	.
chr6	54186066	54186067	chr6:54186067:T:A	rs2754800	T	A	A	Sox2_MA0143.3	22	0	-	0	0	.
chr6	54186087	54186088	chr6:54186088:G:C	rs816386	G	C	G	Sox2_MA0143.3	1	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr6	54333061	54333062	chr6:54333062:G:C	rs7751509	G	C	G	Sox2_MA0143.3	23	0	+	0	0	.
chr6	54419677	54419678	chr6:54419678:A:G	rs1508632	A	G	A	Sox2_MA0143.3	26	0	+	0	0	.
chr6	54718274	54718275	chr6:54718275:A:G	rs58082927	A	G	A	Sox2_MA0143.3	19	0	+	0	0	.
chr6	54835451	54835452	chr6:54835452:T:C	rs75392651	T	C	T	Sox2_MA0143.3	-20	0	-	0	0	.
chr6	54842571	54842572	chr6:54842572:A:G	rs6900328	A	G	A	Sox2_MA0143.3	19	0	+	0	0	.
chr6	55064838	55064839	chr6:55064839:A:C	rs75532661	A	C	A	Sox2_MA0143.3	26	0	+	0	0	.
chr6	55106292	55106293	chr6:55106293:G:A	rs4715516	G	A	G	Sox2_MA0143.3	7	1	+	8.864090315184848	3.5547341015215945	CCTTTGTG
chr6	55106311	55106312	chr6:55106312:G:A	rs12209617	G	A	G	Sox2_MA0143.3	26	0	+	0	0	.
chr6	55141842	55141843	chr6:55141843:C:T	rs4515389	C	T	T	Sox2_MA0143.3	11	0	-	0	0	.
chr6	55215092	55215093	chr6:55215093:A:G	rs12662510	A	G	A	Sox2_MA0143.3	-7	0	-	0	0	.
chr6	55619050	55619051	chr6:55619051:C:G	rs78546997	C	G	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr6	55636894	55636895	chr6:55636895:C:T	rs75386612	C	T	C	Sox2_MA0143.3	10	0	-	0	0	.
chr6	55898710	55898711	chr6:55898711:C:T	rs2397194	C	T	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr6	56033231	56033232	chr6:56033232:A:G	rs761296378	A	G	A	Sox2_MA0143.3	16	0	-	0	0	.
chr6	56091607	56091608	chr6:56091608:A:G	rs140209062	A	G	A	Sox2_MA0143.3	20	0	-	0	0	.
chr6	56222858	56222859	chr6:56222859:A:G	rs990188	A	G	A	Sox2_MA0143.3	25	0	-	0	0	.
chr6	56277870	56277871	chr6:56277871:G:T	rs141081662	G	T	G	Sox2_MA0143.3	1	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr6	56366603	56366604	chr6:56366604:C:T	rs9475687	C	T	C	Sox2_MA0143.3	27	0	-	0	0	.
chr6	56366924	56366925	chr6:56366925:C:T	rs9370525	C	T	C	Sox2_MA0143.3	0	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr6	56442438	56442439	chr6:56442439:T:C	rs17825773	T	C	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr6	56575847	56575848	chr6:56575848:T:C	rs9349831	T	C	T	Sox2_MA0143.3	27	0	+	0	0	.
chr6	56678829	56678830	chr6:56678830:T:C	rs7768101	T	C	T	Sox2_MA0143.3	-7	0	+	0	0	.
chr6	56759619	56759620	chr6:56759620:A:G	rs34803237	A	G	A	Sox2_MA0143.3	-13	0	+	0	0	.
chr6	57068403	57068404	chr6:57068404:C:G	rs10949010	C	G	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr6	57224909	57224910	chr6:57224910:T:A	rs12173390	T	A	T	Sox2_MA0143.3	-8	0	+	0	0	.
chr6	57374974	57374975	chr6:57374975:A:T	rs112321083	A	T	A	Sox2_MA0143.3	3	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr6	57457474	57457475	chr6:57457475:G:A	rs1231552126	G	A	.	Sox2_MA0143.3	19	0	+	0	0	.
chr6	57891329	57891330	chr6:57891330:A:C	rs3880518	A	C	N	Sox2_MA0143.3	-1	0	+	0	0	.
chr6	58129116	58129117	chr6:58129117:C:T	rs1224726	C	T	C	Sox2_MA0143.3	0	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr6	60244324	60244325	chr6:60244325:T:C	rs1482635419	T	C	.	Sox2_MA0143.3	-14	0	-	0	0	.
chr6	61075312	61075313	chr6:61075313:G:A	rs9370715	G	A	G	Sox2_MA0143.3	-16	0	-	0	0	.
chr6	61732698	61732699	chr6:61732699:A:G	rs10484690	A	G	A	Sox2_MA0143.3	18	0	+	0	0	.
chr6	61885707	61885708	chr6:61885708:G:A	rs10455584	G	A	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr6	62218094	62218095	chr6:62218095:T:C	rs517128	T	C	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr6	62344951	62344952	chr6:62344952:G:A	rs6917889	G	A	G	Sox2_MA0143.3	12	0	-	0	0	.
chr6	62586673	62586674	chr6:62586674:A:G	rs9360582	A	G	A	Sox2_MA0143.3	-7	0	-	0	0	.
chr6	62744276	62744277	chr6:62744277:C:G	rs9360756	C	G	C	Sox2_MA0143.3	11	0	-	0	0	.
chr6	62764916	62764917	chr6:62764917:G:C	rs9350543	G	C	G	Sox2_MA0143.3	10	0	-	0	0	.
chr6	62999261	62999262	chr6:62999262:G:A	rs560430527	G	A	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr6	63062873	63062874	chr6:63062874:C:T	rs9352479	C	T	C	Sox2_MA0143.3	5	1	-	9.019595766176417	2.110840986861197	CCATTGTC
chr6	63441865	63441866	chr6:63441866:C:G	rs9294215	C	G	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr6	63480161	63480162	chr6:63480162:C:A	rs9443931	C	A	C	Sox2_MA0143.3	21	0	-	0	0	.
chr6	63571663	63571664	chr6:63571664:C:T	rs1879	C	T	C	Sox2_MA0143.3	21	0	-	0	0	.
chr6	63701923	63701924	chr6:63701924:A:G	rs3800489	A	G	A	Sox2_MA0143.3	-12	0	-	0	0	.
chr6	63750495	63750496	chr6:63750496:T:C	rs114176309	T	C	c	Sox2_MA0143.3	-12	0	+	0	0	.
chr6	63887476	63887477	chr6:63887477:G:T	rs11755149	G	T	G	Sox2_MA0143.3	12	0	-	0	0	.
chr6	63913062	63913063	chr6:63913063:G:A	rs2253395	G	A	G	Sox2_MA0143.3	7	1	+	8.864090315184848	3.5547341015215945	CCTTTGTG
chr6	64050992	64050993	chr6:64050993:A:G	rs9353474	A	G	A	Sox2_MA0143.3	-17	0	+	0	0	.
chr6	64159484	64159485	chr6:64159485:G:T	rs148941212	G	T	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr6	64249370	64249371	chr6:64249371:G:A	rs7451037	G	A	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr6	64322857	64322858	chr6:64322858:C:T	rs7769524	C	T	T	Sox2_MA0143.3	-4	0	-	0	0	.
chr6	64330893	64330894	chr6:64330894:C:T	rs596767	C	T	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr6	64334277	64334278	chr6:64334278:T:A	rs189600687	T	A	T	Sox2_MA0143.3	-20	0	-	0	0	.
chr6	64430947	64430948	chr6:64430948:G:T	rs4631252	G	T	G	Sox2_MA0143.3	14	0	-	0	0	.
chr6	64590881	64590882	chr6:64590882:T:A	rs147641443	T	A	T	Sox2_MA0143.3	-15	0	-	0	0	.
chr6	64672319	64672320	chr6:64672320:C:T	rs12662978	C	T	C	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr6	64849735	64849736	chr6:64849736:G:A	rs2181544	G	A	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr6	65005222	65005223	chr6:65005223:C:T	rs9351479	C	T	c	Sox2_MA0143.3	-19	0	+	0	0	.
chr6	65194660	65194661	chr6:65194661:T:C	rs16896389	T	C	T	Sox2_MA0143.3	20	0	+	0	0	.
chr6	65230023	65230024	chr6:65230024:T:A	rs494707	T	A	A	Sox2_MA0143.3	2	1	-	9.613475778572903	9.800647049772198	CCATTGTT
chr6	65363051	65363052	chr6:65363052:A:G	rs9453277	A	G	G	Sox2_MA0143.3	-11	0	+	0	0	.
chr6	65714437	65714438	chr6:65714438:G:A	rs9363426	G	A	A	Sox2_MA0143.3	16	0	+	0	0	.
chr6	65819281	65819282	chr6:65819282:G:A	rs9453425	G	A	G	Sox2_MA0143.3	7	1	-	9.206767037375712	9.800647049772198	CCTTTGTC
chr6	65855459	65855460	chr6:65855460:G:A	rs9354308	G	A	A	Sox2_MA0143.3	17	0	+	0	0	.
chr6	66191095	66191096	chr6:66191096:C:T	rs9345779	C	T	C	Sox2_MA0143.3	0	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr6	66208956	66208957	chr6:66208957:T:C	rs9363548	T	C	C	Sox2_MA0143.3	2	1	+	3.5547341015215945	-2.751084876953981	CCTTTGTA
chr6	66280296	66280297	chr6:66280297:T:G	rs9354407	T	G	G	Sox2_MA0143.3	23	0	-	0	0	.
chr6	66344990	66344991	chr6:66344991:A:G	rs851860	A	G	G	Sox2_MA0143.3	22	0	+	0	0	.
chr6	66662301	66662302	chr6:66662302:T:C	rs377072739	T	C	T	Sox2_MA0143.3	24	0	+	0	0	.
chr6	66929704	66929705	chr6:66929705:G:A	rs72878649	G	A	G	Sox2_MA0143.3	11	0	-	0	0	.
chr6	66987222	66987223	chr6:66987223:G:T	rs9354518	G	T	G	Sox2_MA0143.3	13	0	+	0	0	.
chr6	67130116	67130117	chr6:67130117:A:G	rs2503979	A	G	A	Sox2_MA0143.3	6	1	-	8.676919043985553	1.7681642646703326	CCATTGTG
chr6	67801977	67801978	chr6:67801978:C:A	rs67230613	C	A	A	Sox2_MA0143.3	5	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr6	67802581	67802582	chr6:67802582:T:A	rs113987660	T	A	A	Sox2_MA0143.3	15	0	-	0	0	.
chr6	68195370	68195371	chr6:68195371:A:C	rs117966673	A	C	A	Sox2_MA0143.3	6	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr6	68328650	68328651	chr6:68328651:A:G	rs9454477	A	G	A	Sox2_MA0143.3	-6	0	-	0	0	.
chr6	68433694	68433695	chr6:68433695:T:G	rs62415542	T	G	G	Sox2_MA0143.3	-3	0	-	0	0	.
chr6	68503043	68503044	chr6:68503044:A:G	rs6933414	A	G	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr6	68616101	68616102	chr6:68616102:G:A	rs76217514	G	A	G	Sox2_MA0143.3	0	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr6	68638446	68638447	chr6:68638447:C:T	rs564725689	C	T	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr6	68826689	68826690	chr6:68826690:T:C	rs62418566	T	C	T	Sox2_MA0143.3	-2	0	-	0	0	.
chr6	68858840	68858841	chr6:68858841:G:T	rs518704	G	T	T	Sox2_MA0143.3	5	1	+	9.613475778572903	2.7047209992576837	CCATTGTT
chr6	69016469	69016470	chr6:69016470:C:T	rs9446085	C	T	C	Sox2_MA0143.3	9	0	+	0	0	.
chr6	69099905	69099906	chr6:69099906:C:T	rs12527828	C	T	C	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr6	69139699	69139700	chr6:69139700:G:A	rs17432036	G	A	G	Sox2_MA0143.3	18	0	+	0	0	.
chr6	69791768	69791769	chr6:69791769:T:G	rs9446161	T	G	T	Sox2_MA0143.3	22	0	+	0	0	.
chr6	69796323	69796324	chr6:69796324:A:T	rs759595868	A	T	A	Sox2_MA0143.3	-5	0	-	0	0	.
chr6	69796327	69796328	chr6:69796328:G:A	rs116041265	G	A	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr6	70194150	70194151	chr6:70194151:C:T	rs150826791	C	T	C	Sox2_MA0143.3	14	0	+	0	0	.
chr6	70230842	70230843	chr6:70230843:G:A	rs4342384	G	A	G	Sox2_MA0143.3	16	0	-	0	0	.
chr6	70312468	70312469	chr6:70312469:A:C	chr6:70312469:A:C	A	C	A	Sox2_MA0143.3	15	0	+	0	0	.
chr6	70779064	70779065	chr6:70779065:A:G	rs147087744	A	G	A	Sox2_MA0143.3	-20	0	-	0	0	.
chr6	71040416	71040417	chr6:71040417:T:C	rs1342761	T	C	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr6	71107202	71107203	chr6:71107203:C:T	rs1935790	C	T	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr6	71114715	71114716	chr6:71114716:C:T	rs9455332	C	T	T	Sox2_MA0143.3	-17	0	+	0	0	.
chr6	71258772	71258773	chr6:71258773:G:T	rs9455399	G	T	g	Sox2_MA0143.3	17	0	+	0	0	.
chr6	71270962	71270963	chr6:71270963:C:G	rs12528959	C	G	C	Sox2_MA0143.3	7	1	+	9.019595766176417	8.676919043985553	CCATTGTC
chr6	71280895	71280896	chr6:71280896:C:G	rs6908858	C	G	c	Sox2_MA0143.3	5	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr6	71393439	71393440	chr6:71393440:A:T	rs1727648	A	T	A	Sox2_MA0143.3	-15	0	+	0	0	.
chr6	71395853	71395854	chr6:71395854:C:T	rs1527714	C	T	T	Sox2_MA0143.3	25	0	+	0	0	.
chr6	71475335	71475336	chr6:71475336:C:T	rs852921	C	T	T	Sox2_MA0143.3	24	0	-	0	0	.
chr6	71490843	71490844	chr6:71490844:T:C	rs113576254	T	C	T	Sox2_MA0143.3	22	0	-	0	0	.
chr6	71514083	71514084	chr6:71514084:T:G	rs199644	T	G	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr6	71642375	71642376	chr6:71642376:G:T	rs6912835	G	T	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr6	71702383	71702384	chr6:71702384:C:A	rs542581449	C	A	A	Sox2_MA0143.3	-17	0	-	0	0	.
chr6	71759007	71759008	chr6:71759008:A:G	rs2348548	A	G	G	Sox2_MA0143.3	6	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr6	71853316	71853317	chr6:71853317:C:T	rs9351871	C	T	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr6	72349041	72349042	chr6:72349042:C:T	rs10485033	C	T	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr6	72442360	72442361	chr6:72442361:T:G	rs10943015	T	G	T	Sox2_MA0143.3	22	0	+	0	0	.
chr6	72763598	72763599	chr6:72763599:T:C	rs12213677	T	C	C	Sox2_MA0143.3	21	0	-	0	0	.
chr6	72832500	72832501	chr6:72832501:A:C	rs72941577	A	C	A	Sox2_MA0143.3	4	1	-	9.800647049772198	2.8918922704569785	CCTTTGTT
chr6	72969203	72969204	chr6:72969204:C:A	rs9351961	C	A	C	Sox2_MA0143.3	13	0	-	0	0	.
chr6	73134450	73134451	chr6:73134451:C:T	rs9442891	C	T	T	Sox2_MA0143.3	-19	0	-	0	0	.
chr6	73326744	73326745	chr6:73326745:T:G	rs9360663	T	G	t	Sox2_MA0143.3	-18	0	-	0	0	.
chr6	73567014	73567015	chr6:73567015:A:T	rs192865927	A	T	A	Sox2_MA0143.3	-15	0	+	0	0	.
chr6	73580484	73580485	chr6:73580485:G:A	chr6:73580485:G:A	G	A	G	Sox2_MA0143.3	11	0	+	0	0	.
chr6	73654421	73654422	chr6:73654422:A:T	chr6:73654422:A:T	A	T	A	Sox2_MA0143.3	14	0	+	0	0	.
chr6	73803972	73803973	chr6:73803973:C:T	chr6:73803973:C:T	C	T	C	Sox2_MA0143.3	20	0	+	0	0	.
chr6	73817875	73817876	chr6:73817876:T:A	rs1866092	T	A	A	Sox2_MA0143.3	-3	0	-	0	0	.
chr6	73874952	73874953	chr6:73874953:C:G	rs3005499	C	G	G	Sox2_MA0143.3	11	0	+	0	0	.
chr6	73879048	73879049	chr6:73879049:T:A	chr6:73879049:T:A	T	A	G	Sox2_MA0143.3	23	0	-	0	0	.
chr6	73932810	73932811	chr6:73932811:G:A	rs66514774	G	A	A	Sox2_MA0143.3	11	0	+	0	0	.
chr6	73956016	73956017	chr6:73956017:G:A	rs4235877	G	A	G	Sox2_MA0143.3	9	0	-	0	0	.
chr6	74130897	74130898	chr6:74130898:A:G	rs13196092	A	G	A	Sox2_MA0143.3	9	0	+	0	0	.
chr6	74164681	74164682	chr6:74164682:A:G	rs78691577	A	G	N	Sox2_MA0143.3	-19	0	+	0	0	.
chr6	74262676	74262677	chr6:74262677:A:G	rs1622445	A	G	A	Sox2_MA0143.3	24	0	-	0	0	.
chr6	74336887	74336888	chr6:74336888:C:G	rs13219212	C	G	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr6	74351607	74351608	chr6:74351608:T:C	rs278351	T	C	C	Sox2_MA0143.3	18	0	+	0	0	.
chr6	74489049	74489050	chr6:74489050:G:A	rs149163141	G	A	-	Sox2_MA0143.3	21	0	-	0	0	.
chr6	74614408	74614409	chr6:74614409:C:T	rs182485142	C	T	C	Sox2_MA0143.3	8	0	-	0	0	.
chr6	74654651	74654652	chr6:74654652:C:T	rs2502479	C	T	T	Sox2_MA0143.3	25	0	+	0	0	.
chr6	75117311	75117312	chr6:75117312:T:C	rs17186509	T	C	T	Sox2_MA0143.3	-4	0	-	0	0	.
chr6	75117315	75117316	chr6:75117316:A:G	rs369338731	A	G	A	Sox2_MA0143.3	-8	0	-	0	0	.
chr6	75272634	75272635	chr6:75272635:A:G	rs429746	A	G	G	Sox2_MA0143.3	16	0	+	0	0	.
chr6	75432116	75432117	chr6:75432117:T:C	rs2951932	T	C	C	Sox2_MA0143.3	3	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr6	75451550	75451551	chr6:75451551:C:T	rs6900339	C	T	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr6	75493280	75493281	chr6:75493281:C:T	rs2312930	C	T	T	Sox2_MA0143.3	-10	0	-	0	0	.
chr6	75657484	75657485	chr6:75657485:A:G	rs766244	A	G	A	Sox2_MA0143.3	17	0	-	0	0	.
chr6	75691836	75691837	chr6:75691837:G:A	rs181607968	G	A	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr6	75754138	75754139	chr6:75754139:A:T	rs1196937585	A	T	A	Sox2_MA0143.3	27	0	-	0	0	.
chr6	76166386	76166387	chr6:76166387:C:T	rs6900948	C	T	C	Sox2_MA0143.3	21	0	-	0	0	.
chr6	76166406	76166407	chr6:76166407:G:A	rs112223162	G	A	G	Sox2_MA0143.3	1	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr6	76351521	76351522	chr6:76351522:G:A	rs2451594	G	A	G	Sox2_MA0143.3	-14	0	+	0	0	.
chr6	76726012	76726013	chr6:76726013:G:A	rs62433395	G	A	G	Sox2_MA0143.3	24	0	+	0	0	.
chr6	76803145	76803146	chr6:76803146:C:T	rs12206594	C	T	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr6	76803162	76803163	chr6:76803163:C:A	rs12206598	C	A	C	Sox2_MA0143.3	0	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr6	77142754	77142755	chr6:77142755:G:C	rs9447981	G	C	G	Sox2_MA0143.3	-11	0	+	0	0	.
chr6	77296038	77296039	chr6:77296039:C:A	rs1935729	C	A	C	Sox2_MA0143.3	24	0	+	0	0	.
chr6	77493052	77493053	chr6:77493053:T:A	rs1213360	T	A	T	Sox2_MA0143.3	-18	0	+	0	0	.
chr6	77493074	77493075	chr6:77493075:T:C	rs1213359	T	C	T	Sox2_MA0143.3	4	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr6	77596310	77596311	chr6:77596311:A:T	rs2446267	A	T	a	Sox2_MA0143.3	2	1	-	9.206767037375712	9.019595766176417	CCTTTGTC
chr6	77793212	77793213	chr6:77793213:G:C	rs9443471	G	C	G	Sox2_MA0143.3	21	0	-	0	0	.
chr6	77846817	77846818	chr6:77846818:G:A	rs60778876	G	A	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr6	77898753	77898754	chr6:77898754:T:A	rs4272185	T	A	T	Sox2_MA0143.3	-8	0	+	0	0	.
chr6	78243528	78243529	chr6:78243529:G:A	rs6911371	G	A	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr6	78459891	78459892	chr6:78459892:A:G	rs9448428	A	G	A	Sox2_MA0143.3	-18	0	-	0	0	.
chr6	78489638	78489639	chr6:78489639:C:T	rs1321585	C	T	T	Sox2_MA0143.3	16	0	-	0	0	.
chr6	78527569	78527570	chr6:78527570:A:G	rs1407105	A	G	G	Sox2_MA0143.3	10	0	-	0	0	.
chr6	78534336	78534337	chr6:78534337:T:A	rs611737	T	A	A	Sox2_MA0143.3	17	0	+	0	0	.
chr6	78810849	78810850	chr6:78810850:C:T	rs115709699	C	T	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr6	78810850	78810851	chr6:78810851:G:T	rs116095096	G	T	T	Sox2_MA0143.3	-2	0	+	0	0	.
chr6	79232766	79232767	chr6:79232767:G:T	rs1335535	G	T	T	Sox2_MA0143.3	1	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr6	79232773	79232774	chr6:79232774:A:G	rs117095909	A	G	A	Sox2_MA0143.3	-6	0	-	0	0	.
chr6	79232844	79232845	chr6:79232845:T:A	rs1335536	T	A	T	Sox2_MA0143.3	6	1	+	9.206767037375712	2.298012258060492	CCTTTGTC
chr6	79243348	79243349	chr6:79243349:G:A	rs17786870	G	A	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr6	79308827	79308828	chr6:79308828:T:G	rs9341769	T	G	T	Sox2_MA0143.3	-15	0	+	0	0	.
chr6	79451272	79451273	chr6:79451273:A:G	rs7740574	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr6	79545215	79545216	chr6:79545216:C:G	rs188885996	C	G	c	Sox2_MA0143.3	-3	0	+	0	0	.
chr6	79552096	79552097	chr6:79552097:C:A	rs2803177	C	A	A	Sox2_MA0143.3	22	0	-	0	0	.
chr6	79647883	79647884	chr6:79647884:C:T	rs62413425	C	T	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr6	79901121	79901122	chr6:79901122:G:A	rs2164166	G	A	G	Sox2_MA0143.3	12	0	-	0	0	.
chr6	79969725	79969726	chr6:79969726:G:A	rs115896934	G	A	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr6	80003181	80003182	chr6:80003182:A:G	rs73747936	A	G	A	Sox2_MA0143.3	-16	0	-	0	0	.
chr6	80329599	80329600	chr6:80329600:A:C	rs7767703	A	C	C	Sox2_MA0143.3	10	0	+	0	0	.
chr6	80338067	80338068	chr6:80338068:G:T	rs577105012	G	T	G	Sox2_MA0143.3	20	0	-	0	0	.
chr6	80356099	80356100	chr6:80356100:C:T	rs1320614	C	T	C	Sox2_MA0143.3	7	1	+	9.206767037375712	9.800647049772198	CCTTTGTC
chr6	80517178	80517179	chr6:80517179:G:A	rs471335	G	A	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr6	80523673	80523674	chr6:80523674:C:T	rs74669686	C	T	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr6	80553532	80553533	chr6:80553533:A:G	rs6933382	A	G	A	Sox2_MA0143.3	27	0	-	0	0	.
chr6	80557832	80557833	chr6:80557833:A:T	rs9449068	A	T	T	Sox2_MA0143.3	-3	0	+	0	0	.
chr6	80609003	80609004	chr6:80609004:G:A	rs192425118	G	A	G	Sox2_MA0143.3	27	0	+	0	0	.
chr6	80612032	80612033	chr6:80612033:C:G	rs2503731	C	G	C	Sox2_MA0143.3	7	1	-	8.676919043985553	9.019595766176417	CCATTGTG
chr6	80962965	80962966	chr6:80962966:T:C	rs9361693	T	C	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr6	81337444	81337445	chr6:81337445:C:T	rs62427765	C	T	T	Sox2_MA0143.3	-16	0	+	0	0	.
chr6	81402305	81402306	chr6:81402306:C:T	rs9361812	C	T	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr6	81452067	81452068	chr6:81452068:T:C	rs117555972	T	C	T	Sox2_MA0143.3	8	0	+	0	0	.
chr6	81459661	81459662	chr6:81459662:C:G	rs73749117	C	G	C	Sox2_MA0143.3	20	0	-	0	0	.
chr6	81728254	81728255	chr6:81728255:A:G	rs67880674	A	G	A	Sox2_MA0143.3	-12	0	+	0	0	.
chr6	81742377	81742378	chr6:81742378:G:T	rs141449295	G	T	G	Sox2_MA0143.3	1	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr6	81754613	81754614	chr6:81754614:C:G	rs772546886	C	G	C	Sox2_MA0143.3	-5	0	-	0	0	.
chr6	81775928	81775929	chr6:81775929:G:A	rs6941969	G	A	G	Sox2_MA0143.3	-16	0	-	0	0	.
chr6	81786716	81786717	chr6:81786717:T:C	rs194615	T	C	T	Sox2_MA0143.3	2	1	-	9.019595766176417	2.900948058900136	CCATTGTC
chr6	81869436	81869437	chr6:81869437:C:A	rs764221855	C	A	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr6	81985310	81985311	chr6:81985311:T:C	chr6:81985311:T:C	T	C	T	Sox2_MA0143.3	-14	0	+	0	0	.
chr6	82015288	82015289	chr6:82015289:A:G	rs199704752	A	G	A	Sox2_MA0143.3	22	0	+	0	0	.
chr6	82015505	82015506	chr6:82015506:A:C	rs79955044	A	C	A	Sox2_MA0143.3	-2	0	-	0	0	.
chr6	82067442	82067443	chr6:82067443:T:A	rs77081872	T	A	T	Sox2_MA0143.3	8	0	-	0	0	.
chr6	82087599	82087600	chr6:82087600:C:T	rs17645582	C	T	C	Sox2_MA0143.3	-12	0	-	0	0	.
chr6	82144180	82144181	chr6:82144181:A:G	rs373874257	A	G	G	Sox2_MA0143.3	26	0	-	0	0	.
chr6	82166531	82166532	chr6:82166532:A:T	rs79583967	A	T	A	Sox2_MA0143.3	-8	0	-	0	0	.
chr6	82247035	82247036	chr6:82247036:G:A	rs555272120	G	A	G	Sox2_MA0143.3	0	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr6	82247047	82247048	chr6:82247048:C:G	rs76982159	C	G	C	Sox2_MA0143.3	-12	0	-	0	0	.
chr6	82265005	82265006	chr6:82265006:A:G	rs140891886	A	G	A	Sox2_MA0143.3	12	0	+	0	0	.
chr6	82452136	82452137	chr6:82452137:G:A	rs2983885	G	A	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr6	82493628	82493629	chr6:82493629:A:G	rs927252	A	G	G	Sox2_MA0143.3	2	1	-	8.864090315184848	2.5582713367092715	CCTTTGTG
chr6	82568316	82568317	chr6:82568317:G:C	rs2917492	G	C	G	Sox2_MA0143.3	19	0	-	0	0	.
chr6	82588102	82588103	chr6:82588103:C:A	rs285976	C	A	c	Sox2_MA0143.3	-9	0	+	0	0	.
chr6	82645832	82645833	chr6:82645833:T:C	rs17771989	T	C	T	Sox2_MA0143.3	-11	0	-	0	0	.
chr6	82693362	82693363	chr6:82693363:C:A	rs9449522	C	A	C	Sox2_MA0143.3	25	0	-	0	0	.
chr6	82779219	82779220	chr6:82779220:A:C	rs73472005	A	C	A	Sox2_MA0143.3	27	0	-	0	0	.
chr6	82877642	82877643	chr6:82877643:T:C	rs9361982	T	C	T	Sox2_MA0143.3	-2	0	+	0	0	.
chr6	82894324	82894325	chr6:82894325:T:C	rs989226	T	C	T	Sox2_MA0143.3	26	0	-	0	0	.
chr6	82956854	82956855	chr6:82956855:C:T	rs62430494	C	T	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr6	83156645	83156646	chr6:83156646:G:A	rs117917800	G	A	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr6	83302845	83302846	chr6:83302846:G:C	rs10943929	G	C	G	Sox2_MA0143.3	22	0	-	0	0	.
chr6	83314900	83314901	chr6:83314901:T:G	rs1144180	T	G	T	Sox2_MA0143.3	13	0	+	0	0	.
chr6	83361991	83361992	chr6:83361992:C:T	rs12697920	C	T	T	Sox2_MA0143.3	9	0	-	0	0	.
chr6	83417906	83417907	chr6:83417907:T:C	rs11969258	T	C	C	Sox2_MA0143.3	11	0	+	0	0	.
chr6	84035459	84035460	chr6:84035460:T:C	rs73752609	T	C	T	Sox2_MA0143.3	9	0	+	0	0	.
chr6	84103354	84103355	chr6:84103355:T:C	rs76338080	T	C	T	Sox2_MA0143.3	-9	0	-	0	0	.
chr6	84260622	84260623	chr6:84260623:G:A	rs17791425	G	A	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr6	84329350	84329351	chr6:84329351:T:C	rs6907261	T	C	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr6	84505117	84505118	chr6:84505118:C:A	rs9341979	C	A	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr6	84588772	84588773	chr6:84588773:A:T	rs12212392	A	T	A	Sox2_MA0143.3	-2	0	-	0	0	.
chr6	84988966	84988967	chr6:84988967:A:T	rs4707107	A	T	T	Sox2_MA0143.3	4	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr6	85071917	85071918	chr6:85071918:C:T	rs4555890	C	T	T	Sox2_MA0143.3	20	0	-	0	0	.
chr6	85144349	85144350	chr6:85144350:T:C	rs2146272	T	C	T	Sox2_MA0143.3	-17	0	+	0	0	.
chr6	85160796	85160797	chr6:85160797:G:A	rs571787	G	A	G	Sox2_MA0143.3	25	0	+	0	0	.
chr6	85168386	85168387	chr6:85168387:G:A	rs1358837	G	A	G	Sox2_MA0143.3	-3	0	-	0	0	.
chr6	85254808	85254809	chr6:85254809:C:T	rs80236046	C	T	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr6	85323578	85323579	chr6:85323579:G:A	rs313177	G	A	G	Sox2_MA0143.3	26	0	-	0	0	.
chr6	85323588	85323589	chr6:85323589:A:C	rs1469900109	A	C	A	Sox2_MA0143.3	16	0	-	0	0	.
chr6	85459486	85459487	chr6:85459487:G:A	rs182055448	G	A	G	Sox2_MA0143.3	13	0	+	0	0	.
chr6	85466237	85466238	chr6:85466238:A:G	rs12524836	A	G	A	Sox2_MA0143.3	-18	0	-	0	0	.
chr6	85489610	85489611	chr6:85489611:G:C	rs9450284	G	C	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr6	85643599	85643600	chr6:85643600:A:C	rs947538604	A	C	A	Sox2_MA0143.3	27	0	+	0	0	.
chr6	85643902	85643903	chr6:85643903:A:G	rs9344539	A	G	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr6	85643903	85643904	chr6:85643904:A:C	rs9362232	A	C	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr6	85644422	85644423	chr6:85644423:A:G	rs137944399	A	G	A	Sox2_MA0143.3	3	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr6	85678169	85678170	chr6:85678170:G:T	rs1059307	G	T	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr6	85827526	85827527	chr6:85827527:G:A	rs539439664	G	A	g	Sox2_MA0143.3	-11	0	+	0	0	.
chr6	85838530	85838531	chr6:85838531:T:C	rs190618220	T	C	-	Sox2_MA0143.3	6	1	+	9.019595766176417	2.110840986861197	CCATTGTC
chr6	85839203	85839204	chr6:85839204:C:T	rs112227461	C	T	-	Sox2_MA0143.3	18	0	-	0	0	.
chr6	85854249	85854250	chr6:85854250:G:T	rs1838958	G	T	a	Sox2_MA0143.3	17	0	+	0	0	.
chr6	86152160	86152161	chr6:86152161:T:G	rs220420	T	G	t	Sox2_MA0143.3	-19	0	+	0	0	.
chr6	86183777	86183778	chr6:86183778:T:C	rs6932202	T	C	T	Sox2_MA0143.3	14	0	+	0	0	.
chr6	86183780	86183781	chr6:86183781:C:T	rs6909434	C	T	C	Sox2_MA0143.3	17	0	+	0	0	.
chr6	86380673	86380674	chr6:86380674:G:T	rs11969382	G	T	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr6	86547883	86547884	chr6:86547884:G:A	rs79240359	G	A	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr6	86558702	86558703	chr6:86558703:C:T	rs78073586	C	T	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr6	86701679	86701680	chr6:86701680:T:C	rs484719	T	C	C	Sox2_MA0143.3	8	0	-	0	0	.
chr6	86897013	86897014	chr6:86897014:C:T	rs1853638	C	T	t	Sox2_MA0143.3	5	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr6	87155476	87155477	chr6:87155477:G:T	rs754227590	G	T	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr6	87155498	87155499	chr6:87155499:G:A	rs188079517	G	A	G	Sox2_MA0143.3	18	0	+	0	0	.
chr6	87155928	87155929	chr6:87155929:C:T	rs181276158	C	T	C	Sox2_MA0143.3	23	0	+	0	0	.
chr6	87184837	87184838	chr6:87184838:A:T	rs1080595	A	T	T	Sox2_MA0143.3	7	1	-	9.800647049772198	3.5547341015215945	CCTTTGTT
chr6	87293580	87293581	chr6:87293581:T:C	rs11759727	T	C	T	Sox2_MA0143.3	-8	0	+	0	0	.
chr6	87408930	87408931	chr6:87408931:A:G	rs12529423	A	G	A	Sox2_MA0143.3	15	0	+	0	0	.
chr6	87472680	87472681	chr6:87472681:T:C	rs188627678	T	C	T	Sox2_MA0143.3	18	0	+	0	0	.
chr6	87483456	87483457	chr6:87483457:C:T	rs9450712	C	T	T	Sox2_MA0143.3	-16	0	-	0	0	.
chr6	87494960	87494961	chr6:87494961:A:G	rs9450717	A	G	A	Sox2_MA0143.3	3	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr6	87502335	87502336	chr6:87502336:A:C	rs2300908	A	C	A	Sox2_MA0143.3	11	0	+	0	0	.
chr6	87527009	87527010	chr6:87527010:A:G	rs9450726	A	G	A	Sox2_MA0143.3	-16	0	-	0	0	.
chr6	87614423	87614424	chr6:87614424:T:C	rs9444525	T	C	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr6	87700451	87700452	chr6:87700452:C:T	rs2754265	C	T	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr6	88009349	88009350	chr6:88009350:C:T	rs61406709	C	T	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr6	88166419	88166420	chr6:88166420:G:A	rs185737033	G	A	G	Sox2_MA0143.3	15	0	+	0	0	.
chr6	88399678	88399679	chr6:88399679:A:C	rs75394903	A	C	A	Sox2_MA0143.3	18	0	+	0	0	.
chr6	88514175	88514176	chr6:88514176:T:C	rs6930870	T	C	C	Sox2_MA0143.3	20	0	-	0	0	.
chr6	88544857	88544858	chr6:88544858:G:A	rs12660724	G	A	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr6	88616524	88616525	chr6:88616525:A:T	rs2756370	A	T	A	Sox2_MA0143.3	-15	0	+	0	0	.
chr6	89045030	89045031	chr6:89045031:C:A	rs855575	C	A	C	Sox2_MA0143.3	1	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr6	89045038	89045039	chr6:89045039:T:C	rs855574	T	C	T	Sox2_MA0143.3	9	0	+	0	0	.
chr6	89059580	89059581	chr6:89059581:A:C	rs9444666	A	C	A	Sox2_MA0143.3	15	0	+	0	0	.
chr6	89251345	89251346	chr6:89251346:A:G	rs16881622	A	G	A	Sox2_MA0143.3	16	0	+	0	0	.
chr6	89299024	89299025	chr6:89299025:C:T	rs7742664	C	T	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr6	89323607	89323608	chr6:89323608:G:T	rs112236523	G	T	G	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr6	89323952	89323953	chr6:89323953:G:A	rs35277686	G	A	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr6	89360408	89360409	chr6:89360409:G:C	rs16881727	G	C	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr6	89488019	89488020	chr6:89488020:C:T	rs138387026	C	T	C	Sox2_MA0143.3	1	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr6	89492311	89492312	chr6:89492312:C:T	rs7742502	C	T	C	Sox2_MA0143.3	1	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr6	89616640	89616641	chr6:89616641:C:T	rs2273238	C	T	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr6	89732131	89732132	chr6:89732132:A:G	rs2768936	A	G	A	Sox2_MA0143.3	27	0	+	0	0	.
chr6	89986261	89986262	chr6:89986262:T:C	rs4053614	T	C	T	Sox2_MA0143.3	3	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr6	90029072	90029073	chr6:90029073:A:G	rs10455513	A	G	A	Sox2_MA0143.3	-19	0	-	0	0	.
chr6	90154886	90154887	chr6:90154887:C:T	rs7743505	C	T	T	Sox2_MA0143.3	-10	0	-	0	0	.
chr6	90160319	90160320	chr6:90160320:C:A	rs140055722	C	A	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr6	90193088	90193089	chr6:90193089:A:T	rs62408211	A	T	A	Sox2_MA0143.3	7	1	-	9.800647049772198	3.5547341015215945	CCTTTGTT
chr6	90256987	90256988	chr6:90256988:C:T	rs75474190	C	T	C	Sox2_MA0143.3	21	0	-	0	0	.
chr6	90256988	90256989	chr6:90256989:G:A	rs115655404	G	A	G	Sox2_MA0143.3	20	0	-	0	0	.
chr6	90313592	90313593	chr6:90313593:C:G	rs285648	C	G	C	Sox2_MA0143.3	1	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr6	90343709	90343710	chr6:90343710:T:C	rs7767533	T	C	T	Sox2_MA0143.3	-6	0	-	0	0	.
chr6	90353431	90353432	chr6:90353432:C:T	rs9451389	C	T	T	Sox2_MA0143.3	26	0	+	0	0	.
chr6	90404512	90404513	chr6:90404513:C:T	rs7453103	C	T	T	Sox2_MA0143.3	-15	0	+	0	0	.
chr6	90424782	90424783	chr6:90424783:G:A	rs1782436	G	A	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr6	90444412	90444413	chr6:90444413:T:C	rs553353003	T	C	T	Sox2_MA0143.3	21	0	+	0	0	.
chr6	90591939	90591940	chr6:90591940:A:G	rs72917834	A	G	A	Sox2_MA0143.3	17	0	+	0	0	.
chr6	90650859	90650860	chr6:90650860:A:C	rs73521446	A	C	A	Sox2_MA0143.3	-19	0	-	0	0	.
chr6	90701750	90701751	chr6:90701751:G:A	rs79472946	G	A	G	Sox2_MA0143.3	13	0	+	0	0	.
chr6	90768302	90768303	chr6:90768303:A:G	rs2204741	A	G	A	Sox2_MA0143.3	-11	0	+	0	0	.
chr6	90924982	90924983	chr6:90924983:C:T	rs1145805	C	T	T	Sox2_MA0143.3	20	0	-	0	0	.
chr6	91097497	91097498	chr6:91097498:C:T	rs9353792	C	T	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr6	91113640	91113641	chr6:91113641:C:G	rs6454839	C	G	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr6	91129903	91129904	chr6:91129904:A:G	rs9359923	A	G	G	Sox2_MA0143.3	11	0	+	0	0	.
chr6	91267936	91267937	chr6:91267937:A:G	rs4473838	A	G	A	Sox2_MA0143.3	14	0	+	0	0	.
chr6	91826400	91826401	chr6:91826401:T:G	rs9362912	T	G	T	Sox2_MA0143.3	12	0	+	0	0	.
chr6	91879559	91879560	chr6:91879560:G:A	rs77316070	G	A	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr6	92109605	92109606	chr6:92109606:A:G	rs934633266	A	G	a	Sox2_MA0143.3	22	0	+	0	0	.
chr6	92110160	92110161	chr6:92110161:C:T	rs2503639	C	T	t	Sox2_MA0143.3	-8	0	+	0	0	.
chr6	92271493	92271494	chr6:92271494:G:A	rs6905866	G	A	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr6	92757733	92757734	chr6:92757734:C:A	rs138631565	C	A	C	Sox2_MA0143.3	16	0	-	0	0	.
chr6	92822558	92822559	chr6:92822559:A:G	rs16870295	A	G	A	Sox2_MA0143.3	-4	0	-	0	0	.
chr6	92952106	92952107	chr6:92952107:G:C	rs11751896	G	C	g	Sox2_MA0143.3	11	0	-	0	0	.
chr6	92995656	92995657	chr6:92995657:C:T	rs978415727	C	T	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr6	93040697	93040698	chr6:93040698:A:G	rs9452212	A	G	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr6	93083631	93083632	chr6:93083632:A:T	rs1324113	A	T	A	Sox2_MA0143.3	-18	0	+	0	0	.
chr6	93131130	93131131	chr6:93131131:A:G	rs634060	A	G	G	Sox2_MA0143.3	21	0	+	0	0	.
chr6	93131136	93131137	chr6:93131137:G:T	rs568957	G	T	G	Sox2_MA0143.3	27	0	+	0	0	.
chr6	93139889	93139890	chr6:93139890:C:T	rs7772178	C	T	C	Sox2_MA0143.3	1	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr6	93166743	93166744	chr6:93166744:G:C	rs12209232	G	C	G	Sox2_MA0143.3	0	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr6	93366699	93366700	chr6:93366700:T:C	rs4707796	T	C	T	Sox2_MA0143.3	-20	0	+	0	0	.
chr6	93492021	93492022	chr6:93492022:T:G	rs7754177	T	G	T	Sox2_MA0143.3	22	0	-	0	0	.
chr6	93506826	93506827	chr6:93506827:T:G	rs967879	T	G	G	Sox2_MA0143.3	26	0	-	0	0	.
chr6	93572626	93572627	chr6:93572627:G:T	rs12211663	G	T	G	Sox2_MA0143.3	22	0	-	0	0	.
chr6	93779554	93779555	chr6:93779555:G:T	rs79029725	G	T	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr6	94027963	94027964	chr6:94027964:G:A	rs12528801	G	A	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr6	94130134	94130135	chr6:94130135:C:T	rs2250906	C	T	T	Sox2_MA0143.3	0	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr6	94729669	94729670	chr6:94729670:A:G	rs9452913	A	G	G	Sox2_MA0143.3	-3	0	-	0	0	.
chr6	94735441	94735442	chr6:94735442:G:C	rs9452920	G	C	C	Sox2_MA0143.3	-12	0	-	0	0	.
chr6	94737197	94737198	chr6:94737198:G:A	rs9452921	G	A	A	Sox2_MA0143.3	-14	0	-	0	0	.
chr6	95087276	95087277	chr6:95087277:A:G	rs74192547	A	G	A	Sox2_MA0143.3	-19	0	+	0	0	.
chr6	95089409	95089410	chr6:95089410:G:A	rs982494571	G	A	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr6	95366232	95366233	chr6:95366233:C:G	rs878985639	C	G	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr6	95545941	95545942	chr6:95545942:A:G	rs62417788	A	G	A	Sox2_MA0143.3	17	0	+	0	0	.
chr6	95561130	95561131	chr6:95561131:C:T	rs142596562	C	T	c	Sox2_MA0143.3	0	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr6	95820032	95820033	chr6:95820033:T:C	rs13219572	T	C	t	Sox2_MA0143.3	27	0	-	0	0	.
chr6	95888910	95888911	chr6:95888911:C:G	rs9497478	C	G	C	Sox2_MA0143.3	11	0	-	0	0	.
chr6	96016751	96016752	chr6:96016752:G:T	rs76593596	G	T	G	Sox2_MA0143.3	1	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr6	96521990	96521991	chr6:96521991:C:T	rs369308301	C	T	C	Sox2_MA0143.3	22	0	+	0	0	.
chr6	96609309	96609310	chr6:96609310:C:T	rs575435614	C	T	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr6	96841825	96841826	chr6:96841826:A:G	rs9386881	A	G	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr6	96841836	96841837	chr6:96841837:T:C	rs9386882	T	C	T	Sox2_MA0143.3	4	1	+	8.864090315184848	1.9553355358696274	CCTTTGTG
chr6	96993618	96993619	chr6:96993619:T:G	rs6939476	T	G	T	Sox2_MA0143.3	14	0	+	0	0	.
chr6	97248035	97248036	chr6:97248036:T:C	rs11153468	T	C	T	Sox2_MA0143.3	25	0	+	0	0	.
chr6	98020407	98020408	chr6:98020408:A:G	rs4131042	A	G	A	Sox2_MA0143.3	9	0	+	0	0	.
chr6	98136438	98136439	chr6:98136439:T:C	rs114333354	T	C	T	Sox2_MA0143.3	25	0	-	0	0	.
chr6	98366770	98366771	chr6:98366771:T:C	rs73495453	T	C	T	Sox2_MA0143.3	-9	0	-	0	0	.
chr6	98514714	98514715	chr6:98514715:C:T	rs150396	C	T	T	Sox2_MA0143.3	13	0	-	0	0	.
chr6	98716387	98716388	chr6:98716388:C:T	rs17769320	C	T	T	Sox2_MA0143.3	-11	0	+	0	0	.
chr6	98725548	98725549	chr6:98725549:T:C	rs4529305	T	C	T	Sox2_MA0143.3	26	0	-	0	0	.
chr6	98748132	98748133	chr6:98748133:C:T	rs9402113	C	T	T	Sox2_MA0143.3	-7	0	-	0	0	.
chr6	98829750	98829751	chr6:98829751:G:A	rs1869642	G	A	G	Sox2_MA0143.3	-3	0	-	0	0	.
chr6	98978032	98978033	chr6:98978033:G:C	rs151201882	G	C	G	Sox2_MA0143.3	22	0	-	0	0	.
chr6	99014875	99014876	chr6:99014876:T:C	rs9385588	T	C	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr6	99104371	99104372	chr6:99104372:T:C	rs6929928	T	C	T	Sox2_MA0143.3	-11	0	+	0	0	.
chr6	99104381	99104382	chr6:99104382:C:G	rs6903212	C	G	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr6	99330416	99330417	chr6:99330417:C:G	rs9376088	C	G	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr6	99668620	99668621	chr6:99668621:C:T	rs73506708	C	T	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr6	99712099	99712100	chr6:99712100:T:C	rs1997801	T	C	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr6	99728474	99728475	chr6:99728475:A:T	rs62434868	A	T	A	Sox2_MA0143.3	2	1	+	8.676919043985553	8.864090315184848	CCATTGTG
chr6	99895112	99895113	chr6:99895113:T:C	rs2397673	T	C	C	Sox2_MA0143.3	23	0	+	0	0	.
chr6	100234858	100234859	chr6:100234859:A:C	chr6:100234859:A:C	A	C	A	Sox2_MA0143.3	13	0	+	0	0	.
chr6	100287534	100287535	chr6:100287535:A:G	rs60804634	A	G	A	Sox2_MA0143.3	20	0	-	0	0	.
chr6	100382382	100382383	chr6:100382383:A:T	rs9390332	A	T	A	Sox2_MA0143.3	6	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr6	100493160	100493161	chr6:100493161:A:G	rs9373504	A	G	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr6	100800296	100800297	chr6:100800297:T:C	rs41288435	T	C	T	Sox2_MA0143.3	-2	0	+	0	0	.
chr6	100924738	100924739	chr6:100924739:A:G	rs75182178	A	G	A	Sox2_MA0143.3	3	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr6	100952188	100952189	chr6:100952189:T:G	rs680857	T	G	G	Sox2_MA0143.3	22	0	+	0	0	.
chr6	101183758	101183759	chr6:101183759:G:A	rs80194065	G	A	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr6	101431496	101431497	chr6:101431497:G:A	rs78464510	G	A	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr6	101916956	101916957	chr6:101916957:A:G	rs12214698	A	G	A	Sox2_MA0143.3	-20	0	-	0	0	.
chr6	102422875	102422876	chr6:102422876:A:G	rs72956089	A	G	A	Sox2_MA0143.3	-17	0	-	0	0	.
chr6	102599620	102599621	chr6:102599621:A:T	rs7774090	A	T	T	Sox2_MA0143.3	-8	0	-	0	0	.
chr6	102599625	102599626	chr6:102599626:T:C	rs7739851	T	C	T	Sox2_MA0143.3	-13	0	-	0	0	.
chr6	102621124	102621125	chr6:102621125:T:C	rs9285554	T	C	t	Sox2_MA0143.3	27	0	+	0	0	.
chr6	102814340	102814341	chr6:102814341:T:G	rs36023659	T	G	t	Sox2_MA0143.3	-4	0	+	0	0	.
chr6	102815412	102815413	chr6:102815413:C:T	rs79644995	C	T	c	Sox2_MA0143.3	8	0	+	0	0	.
chr6	103155886	103155887	chr6:103155887:G:A	rs2753060	G	A	G	Sox2_MA0143.3	17	0	+	0	0	.
chr6	103367157	103367158	chr6:103367158:G:A	rs55792331	G	A	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr6	103534989	103534990	chr6:103534990:A:G	rs2503285	A	G	A	Sox2_MA0143.3	6	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr6	103559291	103559292	chr6:103559292:C:G	rs4074222	C	G	C	Sox2_MA0143.3	14	0	-	0	0	.
chr6	103649243	103649244	chr6:103649244:T:C	rs9654623	T	C	T	Sox2_MA0143.3	3	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr6	103693699	103693700	chr6:103693700:G:T	rs9391101	G	T	T	Sox2_MA0143.3	1	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr6	103800489	103800490	chr6:103800490:T:C	rs75816442	T	C	T	Sox2_MA0143.3	13	0	+	0	0	.
chr6	103802027	103802028	chr6:103802028:C:T	rs34054956	C	T	C	Sox2_MA0143.3	20	0	-	0	0	.
chr6	103871333	103871334	chr6:103871334:T:C	rs13219521	T	C	T	Sox2_MA0143.3	8	0	-	0	0	.
chr6	103893181	103893182	chr6:103893182:G:A	rs73511535	G	A	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr6	103893209	103893210	chr6:103893210:T:C	rs12204615	T	C	T	Sox2_MA0143.3	20	0	+	0	0	.
chr6	103913284	103913285	chr6:103913285:G:C	rs138199957	G	C	G	Sox2_MA0143.3	21	0	+	0	0	.
chr6	104083192	104083193	chr6:104083193:T:G	rs9373751	T	G	T	Sox2_MA0143.3	24	0	-	0	0	.
chr6	104134156	104134157	chr6:104134157:T:C	rs9499769	T	C	T	Sox2_MA0143.3	-3	0	-	0	0	.
chr6	104187570	104187571	chr6:104187571:T:G	rs7751106	T	G	T	Sox2_MA0143.3	-19	0	+	0	0	.
chr6	104187571	104187572	chr6:104187572:G:C	rs2555709	G	C	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr6	104251727	104251728	chr6:104251728:G:C	rs11156376	G	C	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr6	104319094	104319095	chr6:104319095:G:T	rs406927	G	T	T	Sox2_MA0143.3	24	0	+	0	0	.
chr6	104356377	104356378	chr6:104356378:C:T	rs71568200	C	T	c	Sox2_MA0143.3	25	0	-	0	0	.
chr6	104356410	104356411	chr6:104356411:G:A	rs933850140	G	A	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr6	104372861	104372862	chr6:104372862:T:C	rs73517805	T	C	T	Sox2_MA0143.3	-11	0	-	0	0	.
chr6	104438083	104438084	chr6:104438084:G:A	rs77835295	G	A	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr6	104526417	104526418	chr6:104526418:A:C	rs62418525	A	C	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr6	104705617	104705618	chr6:104705618:C:T	rs118142482	C	T	C	Sox2_MA0143.3	-12	0	-	0	0	.
chr6	104928321	104928322	chr6:104928322:T:G	rs78756744	T	G	T	Sox2_MA0143.3	-18	0	+	0	0	.
chr6	105174683	105174684	chr6:105174684:C:T	chr6:105174684:C:T	C	T	C	Sox2_MA0143.3	17	0	+	0	0	.
chr6	105215806	105215807	chr6:105215807:T:A	rs1686161	T	A	T	Sox2_MA0143.3	22	0	-	0	0	.
chr6	105443632	105443633	chr6:105443633:C:T	rs1325421	C	T	T	Sox2_MA0143.3	7	1	-	8.864090315184848	3.5547341015215945	CCTTTGTG
chr6	105458609	105458610	chr6:105458610:A:G	rs9486103	A	G	A	Sox2_MA0143.3	-12	0	-	0	0	.
chr6	105460079	105460080	chr6:105460080:T:C	rs12196063	T	C	T	Sox2_MA0143.3	11	0	+	0	0	.
chr6	105499578	105499579	chr6:105499579:G:T	rs7752979	G	T	G	Sox2_MA0143.3	-14	0	+	0	0	.
chr6	105514727	105514728	chr6:105514728:C:T	rs79684087	C	T	C	Sox2_MA0143.3	17	0	-	0	0	.
chr6	105514749	105514750	chr6:105514750:C:A	rs6904092	C	A	C	Sox2_MA0143.3	-5	0	-	0	0	.
chr6	105545791	105545792	chr6:105545792:C:T	rs2400123	C	T	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr6	105676398	105676399	chr6:105676399:C:T	rs845857	C	T	C	Sox2_MA0143.3	11	0	-	0	0	.
chr6	105676409	105676410	chr6:105676410:G:C	rs13210298	G	C	G	Sox2_MA0143.3	0	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr6	105698036	105698037	chr6:105698037:G:A	rs845855	G	A	G	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr6	105780828	105780829	chr6:105780829:T:G	rs11152918	T	G	T	Sox2_MA0143.3	-1	0	+	0	0	.
chr6	105797494	105797495	chr6:105797495:C:G	rs9486189	C	G	C	Sox2_MA0143.3	8	0	+	0	0	.
chr6	105808690	105808691	chr6:105808691:G:A	rs1995757	G	A	A	Sox2_MA0143.3	-5	0	-	0	0	.
chr6	105832707	105832708	chr6:105832708:G:A	rs114740038	G	A	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr6	105851946	105851947	chr6:105851947:A:G	rs9399950	A	G	G	Sox2_MA0143.3	-14	0	+	0	0	.
chr6	105876133	105876134	chr6:105876134:T:C	rs9399954	T	C	T	Sox2_MA0143.3	7	1	+	9.800647049772198	9.206767037375712	CCTTTGTT
chr6	106066089	106066090	chr6:106066090:C:G	rs78382288	C	G	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr6	106084670	106084671	chr6:106084671:T:C	rs17558797	T	C	T	Sox2_MA0143.3	9	0	+	0	0	.
chr6	106097242	106097243	chr6:106097243:T:G	rs1883230	T	G	T	Sox2_MA0143.3	-11	0	-	0	0	.
chr6	106163749	106163750	chr6:106163750:G:T	rs147318749	G	T	G	Sox2_MA0143.3	5	1	+	9.206767037375712	2.298012258060492	CCTTTGTC
chr6	106163770	106163771	chr6:106163771:C:T	rs141051876	C	T	C	Sox2_MA0143.3	26	0	+	0	0	.
chr6	106189699	106189700	chr6:106189700:C:T	rs6920944	C	T	T	Sox2_MA0143.3	-7	0	-	0	0	.
chr6	106251849	106251850	chr6:106251850:T:C	rs149616923	T	C	T	Sox2_MA0143.3	-14	0	-	0	0	.
chr6	106360439	106360440	chr6:106360440:G:T	rs147884982	G	T	G	Sox2_MA0143.3	-3	0	-	0	0	.
chr6	106360442	106360443	chr6:106360443:G:A	rs141518477	G	A	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr6	106478000	106478001	chr6:106478001:C:T	rs74371164	C	T	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr6	106553580	106553581	chr6:106553581:A:T	rs1770731	A	T	T	Sox2_MA0143.3	2	1	-	9.800647049772198	9.613475778572903	CCTTTGTT
chr6	106575129	106575130	chr6:106575130:A:C	rs6926307	A	C	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr6	106575350	106575351	chr6:106575351:G:A	rs79735382	G	A	G	Sox2_MA0143.3	17	0	-	0	0	.
chr6	106575383	106575384	chr6:106575384:C:G	rs6926888	C	G	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr6	106612932	106612933	chr6:106612933:T:A	rs72945059	T	A	T	Sox2_MA0143.3	7	1	+	9.613475778572903	3.3675628303222993	CCATTGTT
chr6	106800325	106800326	chr6:106800326:C:T	rs3127645	C	T	C	Sox2_MA0143.3	1	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr6	106823928	106823929	chr6:106823929:G:A	rs180806767	G	A	G	Sox2_MA0143.3	12	0	+	0	0	.
chr6	106887106	106887107	chr6:106887107:C:T	rs936065013	C	T	C	Sox2_MA0143.3	14	0	+	0	0	.
chr6	106927687	106927688	chr6:106927688:A:G	rs36130250	A	G	A	Sox2_MA0143.3	24	0	+	0	0	.
chr6	106975087	106975088	chr6:106975088:G:A	rs1208986085	G	A	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr6	106975099	106975100	chr6:106975100:A:C	rs1399210220	A	C	A	Sox2_MA0143.3	-5	0	+	0	0	.
chr6	106981857	106981858	chr6:106981858:A:G	rs1026714979	A	G	A	Sox2_MA0143.3	12	0	-	0	0	.
chr6	107081936	107081937	chr6:107081937:C:T	rs311227	C	T	C	Sox2_MA0143.3	16	0	-	0	0	.
chr6	107205872	107205873	chr6:107205873:C:T	rs12208316	C	T	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr6	107218240	107218241	chr6:107218241:G:A	rs1861419	G	A	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr6	107314541	107314542	chr6:107314542:T:C	rs137882723	T	C	T	Sox2_MA0143.3	9	0	-	0	0	.
chr6	107488799	107488800	chr6:107488800:A:T	rs764699199	A	T	A	Sox2_MA0143.3	22	0	-	0	0	.
chr6	107491407	107491408	chr6:107491408:G:A	rs75047885	G	A	G	Sox2_MA0143.3	-9	0	+	0	0	.
chr6	107560961	107560962	chr6:107560962:A:C	rs79091278	A	C	A	Sox2_MA0143.3	9	0	+	0	0	.
chr6	107636704	107636705	chr6:107636705:G:A	rs138636334	G	A	g	Sox2_MA0143.3	-12	0	-	0	0	.
chr6	107659743	107659744	chr6:107659744:T:G	rs1237475738	T	G	T	Sox2_MA0143.3	-16	0	+	0	0	.
chr6	107690412	107690413	chr6:107690413:T:G	rs2077060	T	G	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr6	107690447	107690448	chr6:107690448:C:G	rs847014	C	G	C	Sox2_MA0143.3	17	0	+	0	0	.
chr6	107690485	107690486	chr6:107690486:C:G	rs76607211	C	G	C	Sox2_MA0143.3	16	0	-	0	0	.
chr6	107691259	107691260	chr6:107691260:C:T	rs79435094	C	T	G	Sox2_MA0143.3	20	0	+	0	0	.
chr6	107706060	107706061	chr6:107706061:C:G	rs6930391	C	G	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr6	107718949	107718950	chr6:107718950:G:A	rs4083470	G	A	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr6	107780153	107780154	chr6:107780154:C:T	rs12665630	C	T	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr6	107780161	107780162	chr6:107780162:C:T	rs76005267	C	T	C	Sox2_MA0143.3	0	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr6	107822956	107822957	chr6:107822957:C:G	rs7771956	C	G	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr6	108119398	108119399	chr6:108119399:C:A	rs4147327	C	A	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr6	108157786	108157787	chr6:108157787:C:G	chr6:108157787:C:G	C	G	C	Sox2_MA0143.3	17	0	+	0	0	.
chr6	108550760	108550761	chr6:108550761:C:A	rs12198276	C	A	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr6	108698828	108698829	chr6:108698829:G:T	rs479744	G	T	T	Sox2_MA0143.3	20	0	-	0	0	.
chr6	108732459	108732460	chr6:108732460:T:C	rs916343	T	C	c	Sox2_MA0143.3	24	0	+	0	0	.
chr6	108740145	108740146	chr6:108740146:A:C	rs886502438	A	C	a	Sox2_MA0143.3	23	0	-	0	0	.
chr6	108740164	108740165	chr6:108740165:A:G	rs578889	A	G	a	Sox2_MA0143.3	4	1	-	8.864090315184848	1.9553355358696274	CCTTTGTG
chr6	108765715	108765716	chr6:108765716:A:G	rs17372954	A	G	A	Sox2_MA0143.3	-4	0	+	0	0	.
chr6	108835305	108835306	chr6:108835306:C:T	rs75037346	C	T	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr6	108837904	108837905	chr6:108837905:C:T	rs146212042	C	T	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr6	108871451	108871452	chr6:108871452:G:C	rs2806364	G	C	G	Sox2_MA0143.3	0	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr6	108989871	108989872	chr6:108989872:G:C	rs146888940	G	C	G	Sox2_MA0143.3	10	0	-	0	0	.
chr6	109071787	109071788	chr6:109071788:C:T	rs17070142	C	T	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr6	109202870	109202871	chr6:109202871:A:G	rs458185	A	G	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr6	109332980	109332981	chr6:109332981:C:T	rs149957769	C	T	C	Sox2_MA0143.3	12	0	+	0	0	.
chr6	109479487	109479488	chr6:109479488:T:A	rs34533653	T	A	T	Sox2_MA0143.3	-20	0	+	0	0	.
chr6	109503569	109503570	chr6:109503570:A:G	rs73520979	A	G	A	Sox2_MA0143.3	-16	0	-	0	0	.
chr6	109705201	109705202	chr6:109705202:A:G	rs79276598	A	G	A	Sox2_MA0143.3	16	0	-	0	0	.
chr6	109706513	109706514	chr6:109706514:G:A	rs3799845	G	A	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr6	109740894	109740895	chr6:109740895:A:T	rs4947016	A	T	A	Sox2_MA0143.3	27	0	-	0	0	.
chr6	109867735	109867736	chr6:109867736:C:G	rs76427921	C	G	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr6	109893195	109893196	chr6:109893196:G:A	rs148850996	G	A	G	Sox2_MA0143.3	11	0	+	0	0	.
chr6	109897079	109897080	chr6:109897080:G:T	rs4636064	G	T	T	Sox2_MA0143.3	-17	0	-	0	0	.
chr6	110045997	110045998	chr6:110045998:G:A	rs12662965	G	A	G	Sox2_MA0143.3	-5	0	+	0	0	.
chr6	110055802	110055803	chr6:110055803:A:C	rs11753953	A	C	A	Sox2_MA0143.3	-18	0	+	0	0	.
chr6	110178794	110178795	chr6:110178795:T:C	rs147565216	T	C	T	Sox2_MA0143.3	26	0	-	0	0	.
chr6	110178827	110178828	chr6:110178828:C:A	rs547253963	C	A	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr6	110180094	110180095	chr6:110180095:C:G	rs930347213	C	G	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr6	110351696	110351697	chr6:110351697:T:A	rs73763042	T	A	A	Sox2_MA0143.3	-17	0	+	0	0	.
chr6	110355323	110355324	chr6:110355324:G:C	rs1033573	G	C	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr6	110390681	110390682	chr6:110390682:C:T	rs2207357	C	T	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr6	110489415	110489416	chr6:110489416:G:A	rs2341049	G	A	G	Sox2_MA0143.3	-9	0	+	0	0	.
chr6	110489450	110489451	chr6:110489451:C:A	rs2494530	C	A	G	Sox2_MA0143.3	26	0	+	0	0	.
chr6	110511590	110511591	chr6:110511591:C:T	rs144878555	C	T	C	Sox2_MA0143.3	24	0	-	0	0	.
chr6	110545621	110545622	chr6:110545622:A:G	rs853555	A	G	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr6	110591401	110591402	chr6:110591402:C:G	rs9320340	C	G	C	Sox2_MA0143.3	12	0	+	0	0	.
chr6	110616905	110616906	chr6:110616906:A:G	rs2817804	A	G	G	Sox2_MA0143.3	2	1	-	9.206767037375712	2.900948058900136	CCTTTGTC
chr6	110652761	110652762	chr6:110652762:G:C	rs55668510	G	C	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr6	110656903	110656904	chr6:110656904:A:G	rs13205298	A	G	A	Sox2_MA0143.3	14	0	-	0	0	.
chr6	110793607	110793608	chr6:110793608:T:C	rs802673	T	C	T	Sox2_MA0143.3	-6	0	+	0	0	.
chr6	110814137	110814138	chr6:110814138:G:A	rs563141146	G	A	G	Sox2_MA0143.3	1	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr6	110859489	110859490	chr6:110859490:C:A	rs1432067344	C	A	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr6	110880223	110880224	chr6:110880224:C:G	rs1279598	C	G	C	Sox2_MA0143.3	7	1	+	9.206767037375712	8.864090315184848	CCTTTGTC
chr6	111032532	111032533	chr6:111032533:G:A	rs77882774	G	A	G	Sox2_MA0143.3	18	0	-	0	0	.
chr6	111096755	111096756	chr6:111096756:G:A	rs1876905	G	A	A	Sox2_MA0143.3	-19	0	+	0	0	.
chr6	111201158	111201159	chr6:111201159:G:A	rs1415519287	G	A	G	Sox2_MA0143.3	24	0	+	0	0	.
chr6	111201419	111201420	chr6:111201420:C:T	rs17807032	C	T	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr6	111210208	111210209	chr6:111210209:G:A	rs354545	G	A	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr6	111239686	111239687	chr6:111239687:G:A	rs12661704	G	A	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr6	111291409	111291410	chr6:111291410:C:G	rs186781578	C	G	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr6	111553229	111553230	chr6:111553230:G:C	rs77589665	G	C	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr6	111555230	111555231	chr6:111555231:G:A	rs186636194	G	A	G	Sox2_MA0143.3	7	1	-	9.019595766176417	9.613475778572903	CCATTGTC
chr6	111572596	111572597	chr6:111572597:C:G	rs74957515	C	G	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr6	111587161	111587162	chr6:111587162:T:C	rs174376	T	C	t	Sox2_MA0143.3	-11	0	+	0	0	.
chr6	111628233	111628234	chr6:111628234:C:A	rs188871592	C	A	C	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr6	111654515	111654516	chr6:111654516:G:A	rs916378	G	A	A	Sox2_MA0143.3	22	0	-	0	0	.
chr6	111709440	111709441	chr6:111709441:C:T	rs2301465	C	T	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr6	111784620	111784621	chr6:111784621:T:C	rs75808032	T	C	T	Sox2_MA0143.3	23	0	-	0	0	.
chr6	111792947	111792948	chr6:111792948:G:A	rs9487718	G	A	G	Sox2_MA0143.3	13	0	-	0	0	.
chr6	111971584	111971585	chr6:111971585:G:T	rs111699339	G	T	G	Sox2_MA0143.3	-16	0	-	0	0	.
chr6	111985540	111985541	chr6:111985541:T:A	rs11756726	T	A	A	Sox2_MA0143.3	-7	0	+	0	0	.
chr6	112087908	112087909	chr6:112087909:T:C	rs149880190	T	C	T	Sox2_MA0143.3	2	1	-	9.613475778572903	3.494828071296623	CCATTGTT
chr6	112199980	112199981	chr6:112199981:G:A	rs2237242	G	A	A	Sox2_MA0143.3	22	0	-	0	0	.
chr6	112203304	112203305	chr6:112203305:T:C	rs2237244	T	C	C	Sox2_MA0143.3	15	0	+	0	0	.
chr6	112253811	112253812	chr6:112253812:A:G	rs147118520	A	G	A	Sox2_MA0143.3	-16	0	-	0	0	.
chr6	112263219	112263220	chr6:112263220:A:G	rs6568727	A	G	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr6	112263222	112263223	chr6:112263223:C:G	rs80270216	C	G	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr6	112283819	112283820	chr6:112283820:C:G	rs79965900	C	G	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr6	112291605	112291606	chr6:112291606:C:A	rs73529616	C	A	C	Sox2_MA0143.3	16	0	-	0	0	.
chr6	112458657	112458658	chr6:112458658:T:G	rs713546	T	G	T	Sox2_MA0143.3	-15	0	+	0	0	.
chr6	112482522	112482523	chr6:112482523:A:G	rs915622200	A	G	A	Sox2_MA0143.3	-3	0	-	0	0	.
chr6	112619027	112619028	chr6:112619028:G:A	rs17074174	G	A	G	Sox2_MA0143.3	12	0	-	0	0	.
chr6	112695183	112695184	chr6:112695184:A:G	rs549565013	A	G	A	Sox2_MA0143.3	11	0	+	0	0	.
chr6	112701546	112701547	chr6:112701547:G:C	rs77215349	G	C	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr6	112729099	112729100	chr6:112729100:G:A	rs55687552	G	A	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr6	112770925	112770926	chr6:112770926:A:G	rs4947202	A	G	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr6	112882216	112882217	chr6:112882217:C:A	rs78031581	C	A	C	Sox2_MA0143.3	15	0	+	0	0	.
chr6	112935009	112935010	chr6:112935010:C:T	rs2795579	C	T	C	Sox2_MA0143.3	13	0	+	0	0	.
chr6	113046485	113046486	chr6:113046486:G:A	rs1680096	G	A	A	Sox2_MA0143.3	-5	0	-	0	0	.
chr6	113147291	113147292	chr6:113147292:G:A	rs2502388	G	A	g	Sox2_MA0143.3	22	0	-	0	0	.
chr6	113186508	113186509	chr6:113186509:T:C	rs2473953	T	C	C	Sox2_MA0143.3	21	0	+	0	0	.
chr6	113207440	113207441	chr6:113207441:A:G	rs9400600	A	G	A	Sox2_MA0143.3	9	0	-	0	0	.
chr6	113251259	113251260	chr6:113251260:A:G	rs6942239	A	G	A	Sox2_MA0143.3	-6	0	-	0	0	.
chr6	113376443	113376444	chr6:113376444:G:A	rs114188886	G	A	G	Sox2_MA0143.3	20	0	+	0	0	.
chr6	113393126	113393127	chr6:113393127:T:C	rs62421559	T	C	T	Sox2_MA0143.3	17	0	+	0	0	.
chr6	113414840	113414841	chr6:113414841:C:T	rs6568788	C	T	C	Sox2_MA0143.3	24	0	+	0	0	.
chr6	113434253	113434254	chr6:113434254:A:G	rs7738052	A	G	G	Sox2_MA0143.3	-3	0	-	0	0	.
chr6	113496097	113496098	chr6:113496098:T:C	rs1008857346	T	C	T	Sox2_MA0143.3	8	0	+	0	0	.
chr6	113496115	113496116	chr6:113496116:T:C	rs143637368	T	C	T	Sox2_MA0143.3	26	0	+	0	0	.
chr6	113496649	113496650	chr6:113496650:C:T	rs72950886	C	T	C	Sox2_MA0143.3	1	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr6	113604546	113604547	chr6:113604547:G:A	rs117740503	G	A	G	Sox2_MA0143.3	5	1	+	9.613475778572903	2.7047209992576837	CCATTGTT
chr6	113631063	113631064	chr6:113631064:T:C	rs6941322	T	C	T	Sox2_MA0143.3	-8	0	-	0	0	.
chr6	113650388	113650389	chr6:113650389:G:A	rs6931833	G	A	G	Sox2_MA0143.3	11	0	-	0	0	.
chr6	113662223	113662224	chr6:113662224:C:G	rs13190855	C	G	C	Sox2_MA0143.3	23	0	+	0	0	.
chr6	113684858	113684859	chr6:113684859:C:T	rs12213076	C	T	C	Sox2_MA0143.3	10	0	-	0	0	.
chr6	113702215	113702216	chr6:113702216:T:C	rs773685	T	C	C	Sox2_MA0143.3	15	0	+	0	0	.
chr6	113719374	113719375	chr6:113719375:C:T	rs55754551	C	T	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr6	113732834	113732835	chr6:113732835:A:G	rs370750562	A	G	A	Sox2_MA0143.3	15	0	-	0	0	.
chr6	113732835	113732836	chr6:113732836:T:C	rs80125058	T	C	T	Sox2_MA0143.3	14	0	-	0	0	.
chr6	113777040	113777041	chr6:113777041:G:A	rs78434727	G	A	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr6	113786316	113786317	chr6:113786317:T:G	rs77224648	T	G	T	Sox2_MA0143.3	-1	0	+	0	0	.
chr6	113857219	113857220	chr6:113857220:C:G	rs1022271617	C	G	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr6	113858196	113858197	chr6:113858197:T:G	rs352090	T	G	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr6	113894626	113894627	chr6:113894627:G:A	rs75324544	G	A	G	Sox2_MA0143.3	13	0	+	0	0	.
chr6	114007859	114007860	chr6:114007860:A:G	rs6568825	A	G	G	Sox2_MA0143.3	15	0	-	0	0	.
chr6	114246255	114246256	chr6:114246256:A:C	rs2349213	A	C	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr6	114376731	114376732	chr6:114376732:C:G	rs186197374	C	G	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr6	114793717	114793718	chr6:114793718:G:C	rs4295513	G	C	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr6	114865734	114865735	chr6:114865735:C:G	rs142554523	C	G	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr6	114908882	114908883	chr6:114908883:T:C	rs4400248	T	C	C	Sox2_MA0143.3	6	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr6	115078586	115078587	chr6:115078587:C:T	rs111517490	C	T	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr6	115121034	115121035	chr6:115121035:C:T	rs34053472	C	T	T	Sox2_MA0143.3	27	0	+	0	0	.
chr6	115150885	115150886	chr6:115150886:A:G	rs144707509	A	G	A	Sox2_MA0143.3	-6	0	+	0	0	.
chr6	115553518	115553519	chr6:115553519:C:T	rs113310598	C	T	C	Sox2_MA0143.3	13	0	+	0	0	.
chr6	115590020	115590021	chr6:115590021:T:C	rs9488724	T	C	T	Sox2_MA0143.3	-17	0	+	0	0	.
chr6	115796885	115796886	chr6:115796886:T:C	rs12660162	T	C	T	Sox2_MA0143.3	2	1	+	9.800647049772198	3.494828071296623	CCTTTGTT
chr6	115882752	115882753	chr6:115882753:G:A	rs376674	G	A	A	Sox2_MA0143.3	-17	0	+	0	0	.
chr6	115882757	115882758	chr6:115882758:C:G	rs375387	C	G	G	Sox2_MA0143.3	-12	0	+	0	0	.
chr6	116074255	116074256	chr6:116074256:G:T	rs573679	G	T	T	Sox2_MA0143.3	7	1	+	8.864090315184848	9.800647049772198	CCTTTGTG
chr6	116254205	116254206	chr6:116254206:A:G	rs78428164	A	G	A	Sox2_MA0143.3	-3	0	+	0	0	.
chr6	116254209	116254210	chr6:116254210:C:G	rs9481616	C	G	C	Sox2_MA0143.3	1	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr6	116409911	116409912	chr6:116409912:G:A	rs9488923	G	A	G	Sox2_MA0143.3	8	0	-	0	0	.
chr6	116483078	116483079	chr6:116483079:C:T	rs74360304	C	T	C	Sox2_MA0143.3	-5	0	-	0	0	.
chr6	116492769	116492770	chr6:116492770:A:G	rs9398436	A	G	A	Sox2_MA0143.3	-9	0	-	0	0	.
chr6	116606332	116606333	chr6:116606333:G:A	rs72950454	G	A	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr6	116683076	116683077	chr6:116683077:T:C	rs11757332	T	C	T	Sox2_MA0143.3	-9	0	+	0	0	.
chr6	116812445	116812446	chr6:116812446:G:T	chr6:116812446:G:T	G	T	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr6	117110344	117110345	chr6:117110345:C:T	rs17078807	C	T	C	Sox2_MA0143.3	12	0	-	0	0	.
chr6	117118766	117118767	chr6:117118767:A:G	rs783373	A	G	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr6	117138999	117139000	chr6:117139000:G:A	rs76519661	G	A	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr6	117232285	117232286	chr6:117232286:G:C	rs7764945	G	C	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr6	117322968	117322969	chr6:117322969:C:T	rs575006	C	T	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr6	117423990	117423991	chr6:117423991:G:C	rs182393280	G	C	G	Sox2_MA0143.3	25	0	-	0	0	.
chr6	117436976	117436977	chr6:117436977:G:A	rs17079183	G	A	A	Sox2_MA0143.3	9	0	-	0	0	.
chr6	117478444	117478445	chr6:117478445:T:A	rs17079279	T	A	t	Sox2_MA0143.3	10	0	-	0	0	.
chr6	117496533	117496534	chr6:117496534:C:G	rs56115066	C	G	C	Sox2_MA0143.3	1	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr6	117505694	117505695	chr6:117505695:G:A	rs79221619	G	A	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr6	117507127	117507128	chr6:117507128:G:T	rs1321813	G	T	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr6	117546887	117546888	chr6:117546888:T:C	rs389663	T	C	T	Sox2_MA0143.3	3	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr6	117579780	117579781	chr6:117579781:C:T	rs10484299	C	T	C	Sox2_MA0143.3	9	0	+	0	0	.
chr6	117668937	117668938	chr6:117668938:T:C	rs76317860	T	C	T	Sox2_MA0143.3	-12	0	-	0	0	.
chr6	117668941	117668942	chr6:117668942:A:T	rs74938919	A	T	A	Sox2_MA0143.3	-16	0	-	0	0	.
chr6	117952662	117952663	chr6:117952663:C:T	rs753014723	C	T	C	Sox2_MA0143.3	16	0	-	0	0	.
chr6	118054334	118054335	chr6:118054335:A:G	rs11153719	A	G	A	Sox2_MA0143.3	-10	0	+	0	0	.
chr6	118241706	118241707	chr6:118241707:G:A	rs6569009	G	A	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr6	118320149	118320150	chr6:118320150:A:G	rs1743256	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr6	118344726	118344727	chr6:118344727:T:G	rs2483918	T	G	G	Sox2_MA0143.3	6	1	+	9.019595766176417	2.110840986861197	CCATTGTC
chr6	118500664	118500665	chr6:118500665:A:G	rs2027884	A	G	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr6	118544357	118544358	chr6:118544358:A:T	rs12195048	A	T	A	Sox2_MA0143.3	27	0	+	0	0	.
chr6	118687660	118687661	chr6:118687661:T:C	rs62423963	T	C	T	Sox2_MA0143.3	3	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr6	118687901	118687902	chr6:118687902:G:C	rs62423964	G	C	C	Sox2_MA0143.3	25	0	+	0	0	.
chr6	118713286	118713287	chr6:118713287:T:G	chr6:118713287:T:G	T	G	T	Sox2_MA0143.3	-3	0	+	0	0	.
chr6	118744125	118744126	chr6:118744126:C:A	rs1417613	C	A	A	Sox2_MA0143.3	25	0	-	0	0	.
chr6	118841705	118841706	chr6:118841706:C:T	rs1630202	C	T	C	Sox2_MA0143.3	26	0	-	0	0	.
chr6	118861206	118861207	chr6:118861207:G:A	rs142477895	G	A	G	Sox2_MA0143.3	20	0	-	0	0	.
chr6	118894052	118894053	chr6:118894053:A:G	rs144606482	A	G	A	Sox2_MA0143.3	15	0	+	0	0	.
chr6	119145291	119145292	chr6:119145292:A:G	rs868575065	A	G	A	Sox2_MA0143.3	19	0	+	0	0	.
chr6	119195495	119195496	chr6:119195496:C:G	rs771912627	C	G	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr6	119203350	119203351	chr6:119203351:G:C	rs9489620	G	C	G	Sox2_MA0143.3	19	0	-	0	0	.
chr6	119240723	119240724	chr6:119240724:G:A	rs144668920	G	A	C	Sox2_MA0143.3	23	0	+	0	0	.
chr6	119353831	119353832	chr6:119353832:G:A	rs370220590	G	A	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr6	119445442	119445443	chr6:119445443:T:A	rs35305935	T	A	T	Sox2_MA0143.3	8	0	+	0	0	.
chr6	119527106	119527107	chr6:119527107:C:T	rs9489728	C	T	C	Sox2_MA0143.3	22	0	+	0	0	.
chr6	119612845	119612846	chr6:119612846:C:T	rs77570593	C	T	T	Sox2_MA0143.3	5	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr6	119637096	119637097	chr6:119637097:T:C	rs807311	T	C	T	Sox2_MA0143.3	-11	0	-	0	0	.
chr6	119830622	119830623	chr6:119830623:A:T	rs2884240	A	T	T	Sox2_MA0143.3	16	0	+	0	0	.
chr6	119885714	119885715	chr6:119885715:C:G	rs5021042	C	G	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr6	119889960	119889961	chr6:119889961:A:G	rs564005	A	G	A	Sox2_MA0143.3	25	0	-	0	0	.
chr6	120056004	120056005	chr6:120056005:T:C	rs761444	T	C	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr6	120141858	120141859	chr6:120141859:C:T	rs568943765	C	T	C	Sox2_MA0143.3	1	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr6	120212495	120212496	chr6:120212496:A:G	rs1968835	A	G	A	Sox2_MA0143.3	6	1	-	9.019595766176417	2.110840986861197	CCATTGTC
chr6	120522624	120522625	chr6:120522625:C:T	rs9489977	C	T	C	Sox2_MA0143.3	23	0	-	0	0	.
chr6	120532999	120533000	chr6:120533000:C:T	rs7775730	C	T	T	Sox2_MA0143.3	-14	0	-	0	0	.
chr6	120779911	120779912	chr6:120779912:T:C	rs76939837	T	C	T	Sox2_MA0143.3	6	1	+	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr6	120830803	120830804	chr6:120830804:G:T	rs145839424	G	T	G	Sox2_MA0143.3	0	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr6	120938942	120938943	chr6:120938943:G:A	rs12193473	G	A	G	Sox2_MA0143.3	21	0	-	0	0	.
chr6	121043827	121043828	chr6:121043828:C:T	rs764613207	C	T	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr6	121043828	121043829	chr6:121043829:A:C	rs751542143	A	C	A	Sox2_MA0143.3	-12	0	-	0	0	.
chr6	121285084	121285085	chr6:121285085:A:G	rs115126544	A	G	A	Sox2_MA0143.3	-9	0	+	0	0	.
chr6	121398556	121398557	chr6:121398557:G:C	rs116340892	G	C	G	Sox2_MA0143.3	25	0	-	0	0	.
chr6	121408531	121408532	chr6:121408532:C:T	rs75472163	C	T	C	Sox2_MA0143.3	25	0	-	0	0	.
chr6	121432691	121432692	chr6:121432692:T:C	rs7740324	T	C	T	Sox2_MA0143.3	12	0	-	0	0	.
chr6	121432796	121432797	chr6:121432797:T:C	rs7740467	T	C	T	Sox2_MA0143.3	21	0	+	0	0	.
chr6	121482188	121482189	chr6:121482189:C:T	rs113594998	C	T	C	Sox2_MA0143.3	14	0	+	0	0	.
chr6	121492688	121492689	chr6:121492689:A:G	rs76785130	A	G	A	Sox2_MA0143.3	8	0	+	0	0	.
chr6	121493915	121493916	chr6:121493916:G:A	rs1924470	G	A	G	Sox2_MA0143.3	19	0	+	0	0	.
chr6	121726902	121726903	chr6:121726903:C:T	rs185637747	C	T	C	Sox2_MA0143.3	26	0	+	0	0	.
chr6	121882648	121882649	chr6:121882649:G:T	rs55656809	G	T	G	Sox2_MA0143.3	17	0	-	0	0	.
chr6	121882664	121882665	chr6:121882665:G:A	rs1414548480	G	A	G	Sox2_MA0143.3	1	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr6	122082741	122082742	chr6:122082742:A:C	rs2606658	A	C	A	Sox2_MA0143.3	6	1	-	8.676919043985553	1.7681642646703326	CCATTGTG
chr6	122563553	122563554	chr6:122563554:C:G	rs1835474	C	G	C	Sox2_MA0143.3	16	0	+	0	0	.
chr6	122695013	122695014	chr6:122695014:T:C	rs6911637	T	C	T	Sox2_MA0143.3	-13	0	+	0	0	.
chr6	122701171	122701172	chr6:122701172:T:C	rs7743671	T	C	T	Sox2_MA0143.3	22	0	-	0	0	.
chr6	122713312	122713313	chr6:122713313:C:A	rs9490533	C	A	A	Sox2_MA0143.3	14	0	+	0	0	.
chr6	122753208	122753209	chr6:122753209:A:T	rs9388132	A	T	A	Sox2_MA0143.3	-9	0	+	0	0	.
chr6	122879256	122879257	chr6:122879257:C:A	rs9320898	C	A	C	Sox2_MA0143.3	22	0	+	0	0	.
chr6	122898036	122898037	chr6:122898037:G:A	rs9490582	G	A	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr6	123341878	123341879	chr6:123341879:T:C	rs9385298	T	C	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr6	123341879	123341880	chr6:123341880:G:A	rs9401659	G	A	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr6	123527445	123527446	chr6:123527446:G:T	rs12192600	G	T	G	Sox2_MA0143.3	5	1	+	9.613475778572903	2.7047209992576837	CCATTGTT
chr6	123649132	123649133	chr6:123649133:G:C	rs9375281	G	C	C	Sox2_MA0143.3	-20	0	-	0	0	.
chr6	123944406	123944407	chr6:123944407:C:T	rs12196910	C	T	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr6	123965480	123965481	chr6:123965481:T:C	rs1267992	T	C	T	Sox2_MA0143.3	6	1	+	9.613475778572903	2.7047209992576837	CCATTGTT
chr6	124209645	124209646	chr6:124209646:A:G	rs802237	A	G	A	Sox2_MA0143.3	12	0	-	0	0	.
chr6	124235014	124235015	chr6:124235015:G:A	rs802309	G	A	G	Sox2_MA0143.3	10	0	-	0	0	.
chr6	124249330	124249331	chr6:124249331:C:T	rs1523979	C	T	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr6	124349294	124349295	chr6:124349295:C:G	rs117397529	C	G	C	Sox2_MA0143.3	11	0	-	0	0	.
chr6	124371408	124371409	chr6:124371409:G:A	rs2208814	G	A	G	Sox2_MA0143.3	22	0	+	0	0	.
chr6	124413360	124413361	chr6:124413361:T:G	rs617762	T	G	t	Sox2_MA0143.3	-6	0	+	0	0	.
chr6	124676149	124676150	chr6:124676150:G:A	rs73770515	G	A	A	Sox2_MA0143.3	-19	0	+	0	0	.
chr6	124858655	124858656	chr6:124858656:G:A	rs9491252	G	A	G	Sox2_MA0143.3	8	0	-	0	0	.
chr6	124858810	124858811	chr6:124858811:T:C	rs12192826	T	C	T	Sox2_MA0143.3	-7	0	-	0	0	.
chr6	124883146	124883147	chr6:124883147:A:C	rs12215400	A	C	A	Sox2_MA0143.3	-20	0	+	0	0	.
chr6	124961105	124961106	chr6:124961106:G:A	rs149000705	G	A	G	Sox2_MA0143.3	26	0	+	0	0	.
chr6	125027780	125027781	chr6:125027781:A:G	rs61361981	A	G	A	Sox2_MA0143.3	3	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr6	125087116	125087117	chr6:125087117:C:G	rs7746892	C	G	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr6	125255504	125255505	chr6:125255505:G:A	rs73772403	G	A	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr6	125340129	125340130	chr6:125340130:C:A	rs114542291	C	A	C	Sox2_MA0143.3	22	0	+	0	0	.
chr6	125364004	125364005	chr6:125364005:C:A	rs9491394	C	A	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr6	125534032	125534033	chr6:125534033:A:G	rs74745839	A	G	A	Sox2_MA0143.3	13	0	+	0	0	.
chr6	125558589	125558590	chr6:125558590:G:A	rs147222768	G	A	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr6	125558597	125558598	chr6:125558598:G:A	rs116423307	G	A	G	Sox2_MA0143.3	-12	0	+	0	0	.
chr6	125585705	125585706	chr6:125585706:T:C	rs4346864	T	C	C	Sox2_MA0143.3	26	0	-	0	0	.
chr6	125585719	125585720	chr6:125585720:A:G	rs17053373	A	G	G	Sox2_MA0143.3	12	0	-	0	0	.
chr6	125758785	125758786	chr6:125758786:G:T	rs13193692	G	T	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr6	125806054	125806055	chr6:125806055:T:C	rs1145983	T	C	C	Sox2_MA0143.3	18	0	-	0	0	.
chr6	125843856	125843857	chr6:125843857:G:A	rs584032	G	A	A	Sox2_MA0143.3	15	0	-	0	0	.
chr6	125945902	125945903	chr6:125945903:T:C	rs1358990	T	C	T	Sox2_MA0143.3	18	0	-	0	0	.
chr6	125945909	125945910	chr6:125945910:G:A	rs720105	G	A	G	Sox2_MA0143.3	11	0	-	0	0	.
chr6	125954839	125954840	chr6:125954840:C:T	rs4897162	C	T	C	Sox2_MA0143.3	19	0	-	0	0	.
chr6	126069618	126069619	chr6:126069619:T:A	rs115438402	T	A	T	Sox2_MA0143.3	-10	0	+	0	0	.
chr6	126292725	126292726	chr6:126292726:T:C	rs675829	T	C	C	Sox2_MA0143.3	10	0	-	0	0	.
chr6	126723623	126723624	chr6:126723624:T:A	rs853980	T	A	T	Sox2_MA0143.3	-4	0	-	0	0	.
chr6	126792858	126792859	chr6:126792859:C:A	rs144092203	C	A	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr6	126842229	126842230	chr6:126842230:T:A	rs17563556	T	A	T	Sox2_MA0143.3	26	0	+	0	0	.
chr6	126963516	126963517	chr6:126963517:G:A	rs115093508	G	A	G	Sox2_MA0143.3	-2	0	+	0	0	.
chr6	127111511	127111512	chr6:127111512:A:G	rs1936797	A	G	A	Sox2_MA0143.3	-20	0	-	0	0	.
chr6	127343659	127343660	chr6:127343660:G:T	rs186179947	G	T	G	Sox2_MA0143.3	17	0	-	0	0	.
chr6	127347447	127347448	chr6:127347448:C:G	rs9491739	C	G	C	Sox2_MA0143.3	-5	0	-	0	0	.
chr6	127384346	127384347	chr6:127384347:G:C	rs79335138	G	C	G	Sox2_MA0143.3	19	0	+	0	0	.
chr6	127420711	127420712	chr6:127420712:C:T	rs59643654	C	T	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr6	127519477	127519478	chr6:127519478:C:T	rs146272428	C	T	C	Sox2_MA0143.3	9	0	-	0	0	.
chr6	127519864	127519865	chr6:127519865:C:T	chr6:127519865:C:T	C	T	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr6	127554738	127554739	chr6:127554739:T:C	rs1512464	T	C	T	Sox2_MA0143.3	-20	0	+	0	0	.
chr6	127689966	127689967	chr6:127689967:A:C	rs614885	A	C	a	Sox2_MA0143.3	-7	0	+	0	0	.
chr6	127701025	127701026	chr6:127701026:G:T	rs11967932	G	T	G	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr6	127791387	127791388	chr6:127791388:C:A	rs7750143	C	A	C	Sox2_MA0143.3	5	1	-	8.676919043985553	1.7681642646703324	CCATTGTG
chr6	127813370	127813371	chr6:127813371:C:T	rs142642838	C	T	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr6	128483884	128483885	chr6:128483885:T:C	rs11964217	T	C	T	Sox2_MA0143.3	20	0	+	0	0	.
chr6	128499797	128499798	chr6:128499798:A:G	rs9482889	A	G	G	Sox2_MA0143.3	-14	0	+	0	0	.
chr6	128501546	128501547	chr6:128501547:G:A	rs75606736	G	A	G	Sox2_MA0143.3	11	0	-	0	0	.
chr6	128510094	128510095	chr6:128510095:C:T	rs17364020	C	T	T	Sox2_MA0143.3	25	0	-	0	0	.
chr6	128520072	128520073	chr6:128520073:C:T	rs148944561	C	T	C	Sox2_MA0143.3	5	1	-	9.613475778572903	2.7047209992576837	CCATTGTT
chr6	128520740	128520741	chr6:128520741:C:G	rs1007045823	C	G	c	Sox2_MA0143.3	-17	0	+	0	0	.
chr6	128520757	128520758	chr6:128520758:C:T	rs376398041	C	T	C	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr6	128659532	128659533	chr6:128659533:C:T	rs542925	C	T	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr6	128821371	128821372	chr6:128821372:T:C	rs9372903	T	C	T	Sox2_MA0143.3	26	0	-	0	0	.
chr6	128821391	128821392	chr6:128821392:A:C	rs9372904	A	C	C	Sox2_MA0143.3	6	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr6	129006756	129006757	chr6:129006757:A:C	rs17780567	A	C	A	Sox2_MA0143.3	-12	0	+	0	0	.
chr6	129015890	129015891	chr6:129015891:A:G	rs9492195	A	G	A	Sox2_MA0143.3	-16	0	-	0	0	.
chr6	129050494	129050495	chr6:129050495:A:G	rs12191019	A	G	A	Sox2_MA0143.3	2	1	-	3.5547341015215945	-2.751084876953981	CCTTTGTA
chr6	129089516	129089517	chr6:129089517:A:C	rs6921064	A	C	A	Sox2_MA0143.3	26	0	+	0	0	.
chr6	129212053	129212054	chr6:129212054:G:T	rs112891190	G	T	G	Sox2_MA0143.3	-14	0	+	0	0	.
chr6	129440775	129440776	chr6:129440776:C:G	rs73775406	C	G	G	Sox2_MA0143.3	-3	0	+	0	0	.
chr6	129440799	129440800	chr6:129440800:C:T	rs199878847	C	T	C	Sox2_MA0143.3	21	0	+	0	0	.
chr6	129551820	129551821	chr6:129551821:G:T	rs10457525	G	T	T	Sox2_MA0143.3	0	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr6	129590732	129590733	chr6:129590733:C:T	rs560023887	C	T	C	Sox2_MA0143.3	-12	0	-	0	0	.
chr6	129594261	129594262	chr6:129594262:T:C	rs4895852	T	C	C	Sox2_MA0143.3	7	1	+	9.800647049772198	9.206767037375712	CCTTTGTT
chr6	129598377	129598378	chr6:129598378:C:T	rs9402144	C	T	C	Sox2_MA0143.3	23	0	-	0	0	.
chr6	129598384	129598385	chr6:129598385:G:T	rs139606723	G	T	G	Sox2_MA0143.3	16	0	-	0	0	.
chr6	129667904	129667905	chr6:129667905:G:T	rs72986972	G	T	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr6	129697220	129697221	chr6:129697221:T:C	rs113686332	T	C	T	Sox2_MA0143.3	-1	0	-	0	0	.
chr6	129771858	129771859	chr6:129771859:A:T	rs9402173	A	T	T	Sox2_MA0143.3	24	0	+	0	0	.
chr6	130107870	130107871	chr6:130107871:A:G	rs9388772	A	G	A	Sox2_MA0143.3	16	0	+	0	0	.
chr6	130252717	130252718	chr6:130252718:C:T	rs17058617	C	T	T	Sox2_MA0143.3	1	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr6	130377093	130377094	chr6:130377094:C:T	rs73611658	C	T	C	Sox2_MA0143.3	22	0	+	0	0	.
chr6	130466963	130466964	chr6:130466964:G:A	chr6:130466964:G:A	G	A	G	Sox2_MA0143.3	11	0	+	0	0	.
chr6	130466977	130466978	chr6:130466978:C:G	rs6934159	C	G	C	Sox2_MA0143.3	25	0	+	0	0	.
chr6	130576116	130576117	chr6:130576117:C:T	rs141083510	C	T	C	Sox2_MA0143.3	24	0	+	0	0	.
chr6	130594183	130594184	chr6:130594184:C:T	rs12662323	C	T	C	Sox2_MA0143.3	-5	0	-	0	0	.
chr6	130693264	130693265	chr6:130693265:T:C	rs9388832	T	C	T	Sox2_MA0143.3	-4	0	-	0	0	.
chr6	130796460	130796461	chr6:130796461:A:C	rs78201748	A	C	A	Sox2_MA0143.3	-17	0	+	0	0	.
chr6	131061327	131061328	chr6:131061328:C:T	rs144484081	C	T	C	Sox2_MA0143.3	8	0	+	0	0	.
chr6	131100011	131100012	chr6:131100012:G:A	rs4895915	G	A	G	Sox2_MA0143.3	14	0	+	0	0	.
chr6	131130845	131130846	chr6:131130846:G:A	rs12200100	G	A	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr6	131142212	131142213	chr6:131142213:C:T	rs111873282	C	T	C	Sox2_MA0143.3	24	0	-	0	0	.
chr6	131629346	131629347	chr6:131629347:G:C	rs3756786	G	C	C	Sox2_MA0143.3	20	0	+	0	0	.
chr6	131776234	131776235	chr6:131776235:G:C	rs13203103	G	C	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr6	131779469	131779470	chr6:131779470:G:A	rs7758525	G	A	G	Sox2_MA0143.3	26	0	+	0	0	.
chr6	132053814	132053815	chr6:132053815:A:G	rs191234828	A	G	A	Sox2_MA0143.3	-11	0	+	0	0	.
chr6	132123181	132123182	chr6:132123182:G:C	chr6:132123182:G:C	G	C	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr6	132198105	132198106	chr6:132198106:A:C	rs4895932	A	C	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr6	132332111	132332112	chr6:132332112:C:T	rs72994804	C	T	C	Sox2_MA0143.3	26	0	-	0	0	.
chr6	132603024	132603025	chr6:132603025:C:T	rs9493393	C	T	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr6	132681129	132681130	chr6:132681130:G:A	rs2064312	G	A	G	Sox2_MA0143.3	9	0	+	0	0	.
chr6	132712473	132712474	chr6:132712474:T:C	chr6:132712474:T:C	T	C	T	Sox2_MA0143.3	-5	0	+	0	0	.
chr6	132752108	132752109	chr6:132752109:A:T	rs13204496	A	T	A	Sox2_MA0143.3	11	0	-	0	0	.
chr6	132973655	132973656	chr6:132973656:C:T	rs885488	C	T	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr6	133040013	133040014	chr6:133040014:T:C	rs9493501	T	C	T	Sox2_MA0143.3	-2	0	-	0	0	.
chr6	133160737	133160738	chr6:133160738:G:A	rs77558391	G	A	G	Sox2_MA0143.3	-14	0	+	0	0	.
chr6	133193591	133193592	chr6:133193592:T:C	rs73773575	T	C	T	Sox2_MA0143.3	3	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr6	133244180	133244181	chr6:133244181:T:C	rs983049454	T	C	T	Sox2_MA0143.3	-2	0	+	0	0	.
chr6	133286995	133286996	chr6:133286996:T:C	rs73776019	T	C	T	Sox2_MA0143.3	9	0	+	0	0	.
chr6	133287009	133287010	chr6:133287010:G:C	chr6:133287010:G:C	G	C	G	Sox2_MA0143.3	23	0	+	0	0	.
chr6	133287010	133287011	chr6:133287011:T:C	rs79666025	T	C	T	Sox2_MA0143.3	24	0	+	0	0	.
chr6	133469064	133469065	chr6:133469065:G:C	rs9493628	G	C	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr6	133528650	133528651	chr6:133528651:A:G	rs3822939	A	G	G	Sox2_MA0143.3	4	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr6	133560788	133560789	chr6:133560789:A:G	rs149874527	A	G	A	Sox2_MA0143.3	3	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr6	133654801	133654802	chr6:133654802:T:C	rs9493685	T	C	C	Sox2_MA0143.3	25	0	+	0	0	.
chr6	133689367	133689368	chr6:133689368:A:T	rs9493695	A	T	T	Sox2_MA0143.3	4	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr6	133800363	133800364	chr6:133800364:T:C	rs2104261	T	C	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr6	133814990	133814991	chr6:133814991:G:C	rs116851966	G	C	G	Sox2_MA0143.3	27	0	+	0	0	.
chr6	133952265	133952266	chr6:133952266:C:T	rs146710523	C	T	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr6	133952266	133952267	chr6:133952267:G:A	rs55972523	G	A	G	Sox2_MA0143.3	-3	0	+	0	0	.
chr6	134146585	134146586	chr6:134146586:C:A	rs9493844	C	A	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr6	134148771	134148772	chr6:134148772:A:T	rs2811693	A	T	T	Sox2_MA0143.3	-7	0	+	0	0	.
chr6	134268238	134268239	chr6:134268239:A:G	rs187266585	A	G	A	Sox2_MA0143.3	6	1	-	9.613475778572903	2.7047209992576837	CCATTGTT
chr6	134410473	134410474	chr6:134410474:G:T	rs9493939	G	T	T	Sox2_MA0143.3	12	0	+	0	0	.
chr6	134412943	134412944	chr6:134412944:A:G	rs9483697	A	G	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr6	134426860	134426861	chr6:134426861:A:G	rs12197811	A	G	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr6	134436397	134436398	chr6:134436398:C:T	rs375495867	C	T	C	Sox2_MA0143.3	5	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr6	134446418	134446419	chr6:134446419:G:A	rs6917376	G	A	A	Sox2_MA0143.3	-12	0	+	0	0	.
chr6	134446431	134446432	chr6:134446432:C:T	rs6917069	C	T	C	Sox2_MA0143.3	1	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr6	134474703	134474704	chr6:134474704:A:T	rs115143695	A	T	T	Sox2_MA0143.3	13	0	+	0	0	.
chr6	134502780	134502781	chr6:134502781:A:G	rs1040637	A	G	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr6	134503459	134503460	chr6:134503460:A:T	rs4896065	A	T	T	Sox2_MA0143.3	22	0	-	0	0	.
chr6	134710862	134710863	chr6:134710863:A:G	rs6910622	A	G	G	Sox2_MA0143.3	10	0	+	0	0	.
chr6	134735910	134735911	chr6:134735911:C:A	rs6569969	C	A	C	Sox2_MA0143.3	5	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr6	134739133	134739134	chr6:134739134:T:C	rs9389216	T	C	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr6	134827144	134827145	chr6:134827145:A:G	rs143755220	A	G	A	Sox2_MA0143.3	-3	0	-	0	0	.
chr6	134827148	134827149	chr6:134827149:A:G	rs554398880	A	G	A	Sox2_MA0143.3	-7	0	-	0	0	.
chr6	134827157	134827158	chr6:134827158:C:T	rs74733135	C	T	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr6	134851165	134851166	chr6:134851166:C:T	rs1883224	C	T	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr6	134873940	134873941	chr6:134873941:T:C	rs73775978	T	C	T	Sox2_MA0143.3	3	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr6	134908718	134908719	chr6:134908719:T:G	rs6917170	T	G	T	Sox2_MA0143.3	21	0	-	0	0	.
chr6	135021647	135021648	chr6:135021648:C:A	rs4896126	C	A	A	Sox2_MA0143.3	-18	0	-	0	0	.
chr6	135283391	135283392	chr6:135283392:G:A	rs557472195	G	A	G	Sox2_MA0143.3	22	0	-	0	0	.
chr6	135305209	135305210	chr6:135305210:T:G	rs6928977	T	G	G	Sox2_MA0143.3	-14	0	+	0	0	.
chr6	135371479	135371480	chr6:135371480:G:A	rs2614285	G	A	G	Sox2_MA0143.3	-3	0	+	0	0	.
chr6	135577494	135577495	chr6:135577495:T:A	rs80199876	T	A	T	Sox2_MA0143.3	15	0	+	0	0	.
chr6	135620169	135620170	chr6:135620170:A:G	rs3734213	A	G	A	Sox2_MA0143.3	2	1	+	8.676919043985553	2.5582713367092715	CCATTGTG
chr6	135631913	135631914	chr6:135631914:G:A	rs35195216	G	A	G	Sox2_MA0143.3	1	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr6	135926442	135926443	chr6:135926443:T:A	rs9494422	T	A	T	Sox2_MA0143.3	16	0	-	0	0	.
chr6	135943865	135943866	chr6:135943866:T:C	rs77726388	T	C	T	Sox2_MA0143.3	-17	0	-	0	0	.
chr6	136030157	136030158	chr6:136030158:C:A	rs4896197	C	A	C	Sox2_MA0143.3	5	1	-	9.019595766176417	2.110840986861197	CCATTGTC
chr6	136034564	136034565	chr6:136034565:C:T	rs12203398	C	T	c	Sox2_MA0143.3	-9	0	+	0	0	.
chr6	136055888	136055889	chr6:136055889:C:G	rs9376174	C	G	G	Sox2_MA0143.3	19	0	+	0	0	.
chr6	136734835	136734836	chr6:136734836:T:C	rs9784774	T	C	T	Sox2_MA0143.3	23	0	+	0	0	.
chr6	136787618	136787619	chr6:136787619:A:G	rs6912539	A	G	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr6	136923594	136923595	chr6:136923595:G:A	rs115516258	G	A	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr6	136956960	136956961	chr6:136956961:G:T	rs72989705	G	T	G	Sox2_MA0143.3	5	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr6	137058955	137058956	chr6:137058956:G:A	rs114294674	G	A	A	Sox2_MA0143.3	-8	0	-	0	0	.
chr6	137103149	137103150	chr6:137103150:A:G	rs76607628	A	G	A	Sox2_MA0143.3	15	0	+	0	0	.
chr6	137119774	137119775	chr6:137119775:G:T	rs74524812	G	T	G	Sox2_MA0143.3	15	0	+	0	0	.
chr6	137124631	137124632	chr6:137124632:A:C	rs2146275	A	C	A	Sox2_MA0143.3	26	0	-	0	0	.
chr6	137169408	137169409	chr6:137169409:C:A	rs13193435	C	A	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr6	137298033	137298034	chr6:137298034:C:T	rs78437912	C	T	C	Sox2_MA0143.3	18	0	+	0	0	.
chr6	137298040	137298041	chr6:137298041:C:G	rs191979972	C	G	C	Sox2_MA0143.3	25	0	+	0	0	.
chr6	137343153	137343154	chr6:137343154:A:G	chr6:137343154:A:G	A	G	A	Sox2_MA0143.3	-2	0	+	0	0	.
chr6	137343156	137343157	chr6:137343157:C:T	rs59286653	C	T	C	Sox2_MA0143.3	1	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr6	137366092	137366093	chr6:137366093:C:A	rs932220	C	A	C	Sox2_MA0143.3	-5	0	-	0	0	.
chr6	137390077	137390078	chr6:137390078:G:T	rs9402891	G	T	T	Sox2_MA0143.3	27	0	-	0	0	.
chr6	137452419	137452420	chr6:137452420:A:T	rs6570159	A	T	T	Sox2_MA0143.3	-11	0	-	0	0	.
chr6	137471610	137471611	chr6:137471611:C:G	rs17442826	C	G	C	Sox2_MA0143.3	26	0	-	0	0	.
chr6	137560063	137560064	chr6:137560064:G:A	rs138406379	G	A	G	Sox2_MA0143.3	23	0	+	0	0	.
chr6	137712095	137712096	chr6:137712096:C:A	rs651645	C	A	A	Sox2_MA0143.3	-16	0	-	0	0	.
chr6	137749984	137749985	chr6:137749985:A:G	rs139123295	A	G	A	Sox2_MA0143.3	-19	0	+	0	0	.
chr6	137750170	137750171	chr6:137750171:A:T	rs1538333	A	T	T	Sox2_MA0143.3	17	0	-	0	0	.
chr6	137762827	137762828	chr6:137762828:C:T	rs77271426	C	T	C	Sox2_MA0143.3	21	0	-	0	0	.
chr6	137821599	137821600	chr6:137821600:A:G	rs2788289	A	G	A	Sox2_MA0143.3	-2	0	-	0	0	.
chr6	137865394	137865395	chr6:137865395:A:G	rs59693083	A	G	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr6	137868377	137868378	chr6:137868378:A:G	rs5029926	A	G	G	Sox2_MA0143.3	18	0	+	0	0	.
chr6	137871213	137871214	chr6:137871214:T:G	rs199763604	T	G	T	Sox2_MA0143.3	17	0	-	0	0	.
chr6	137911674	137911675	chr6:137911675:C:T	rs73566277	C	T	C	Sox2_MA0143.3	27	0	+	0	0	.
chr6	137955870	137955871	chr6:137955871:C:T	rs893560233	C	T	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr6	138025986	138025987	chr6:138025987:C:T	rs72982769	C	T	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr6	138025987	138025988	chr6:138025988:A:G	rs67035700	A	G	A	Sox2_MA0143.3	-8	0	+	0	0	.
chr6	138088535	138088536	chr6:138088536:C:A	rs76437268	C	A	C	Sox2_MA0143.3	23	0	+	0	0	.
chr6	138119700	138119701	chr6:138119701:T:C	rs1931867	T	C	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr6	138165201	138165202	chr6:138165202:C:G	rs72986831	C	G	g	Sox2_MA0143.3	8	0	+	0	0	.
chr6	138183963	138183964	chr6:138183964:A:G	rs76904396	A	G	a	Sox2_MA0143.3	16	0	+	0	0	.
chr6	138207319	138207320	chr6:138207320:G:A	rs6570215	G	A	A	Sox2_MA0143.3	-6	0	+	0	0	.
chr6	138543214	138543215	chr6:138543215:C:A	rs73557335	C	A	C	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr6	138583146	138583147	chr6:138583147:C:T	rs4896375	C	T	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr6	138727016	138727017	chr6:138727017:T:C	rs1133445	T	C	C	Sox2_MA0143.3	27	0	-	0	0	.
chr6	138752225	138752226	chr6:138752226:A:C	chr6:138752226:A:C	A	C	G	Sox2_MA0143.3	19	0	-	0	0	.
chr6	138752225	138752226	chr6:138752226:A:G	rs6940924	A	G	G	Sox2_MA0143.3	19	0	-	0	0	.
chr6	138814852	138814853	chr6:138814853:C:A	rs9376372	C	A	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr6	139033554	139033555	chr6:139033555:C:T	rs6570302	C	T	T	Sox2_MA0143.3	-12	0	+	0	0	.
chr6	139155209	139155210	chr6:139155210:C:T	rs9403046	C	T	T	Sox2_MA0143.3	-1	0	-	0	0	.
chr6	139172604	139172605	chr6:139172605:G:C	rs75925486	G	C	G	Sox2_MA0143.3	1	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr6	139248695	139248696	chr6:139248696:G:A	rs6912386	G	A	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr6	139281301	139281302	chr6:139281302:T:A	rs9495412	T	A	A	Sox2_MA0143.3	12	0	-	0	0	.
chr6	139292350	139292351	chr6:139292351:C:T	rs73560785	C	T	C	Sox2_MA0143.3	11	0	+	0	0	.
chr6	139308386	139308387	chr6:139308387:C:T	rs4543384	C	T	T	Sox2_MA0143.3	15	0	-	0	0	.
chr6	139324001	139324002	chr6:139324002:T:C	rs59907229	T	C	T	Sox2_MA0143.3	-19	0	+	0	0	.
chr6	139324003	139324004	chr6:139324004:G:T	chr6:139324004:G:T	G	T	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr6	139324010	139324011	chr6:139324011:C:T	rs11962866	C	T	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr6	139324020	139324021	chr6:139324021:C:T	rs144533983	C	T	C	Sox2_MA0143.3	0	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr6	139324021	139324022	chr6:139324022:C:G	rs997497778	C	G	C	Sox2_MA0143.3	1	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr6	139375221	139375222	chr6:139375222:G:A	rs190383076	G	A	G	Sox2_MA0143.3	-3	0	+	0	0	.
chr6	139375225	139375226	chr6:139375226:C:T	rs182070965	C	T	C	Sox2_MA0143.3	1	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr6	139378983	139378984	chr6:139378984:A:C	rs75783956	A	C	A	Sox2_MA0143.3	10	0	-	0	0	.
chr6	139501184	139501185	chr6:139501185:A:G	rs62440903	A	G	A	Sox2_MA0143.3	3	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr6	139501189	139501190	chr6:139501190:A:G	rs4895563	A	G	A	Sox2_MA0143.3	-2	0	-	0	0	.
chr6	139641406	139641407	chr6:139641407:A:G	rs72978989	A	G	A	Sox2_MA0143.3	-20	0	+	0	0	.
chr6	139852332	139852333	chr6:139852333:G:A	rs7755382	G	A	g	Sox2_MA0143.3	-18	0	-	0	0	.
chr6	139942689	139942690	chr6:139942690:G:A	rs1977739	G	A	A	Sox2_MA0143.3	-19	0	-	0	0	.
chr6	139960805	139960806	chr6:139960806:T:G	rs615587	T	G	G	Sox2_MA0143.3	25	0	-	0	0	.
chr6	140138598	140138599	chr6:140138599:A:T	rs9376497	A	T	A	Sox2_MA0143.3	-13	0	+	0	0	.
chr6	140138877	140138878	chr6:140138878:G:A	rs9389750	G	A	G	Sox2_MA0143.3	25	0	-	0	0	.
chr6	140312693	140312694	chr6:140312694:A:G	rs35626395	A	G	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr6	140623669	140623670	chr6:140623670:C:T	rs562680413	C	T	C	Sox2_MA0143.3	19	0	+	0	0	.
chr6	140834061	140834062	chr6:140834062:A:G	rs630383	A	G	G	Sox2_MA0143.3	18	0	-	0	0	.
chr6	140941864	140941865	chr6:140941865:C:T	rs9376550	C	T	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr6	141071389	141071390	chr6:141071390:T:C	rs12203099	T	C	T	Sox2_MA0143.3	20	0	-	0	0	.
chr6	141077906	141077907	chr6:141077907:C:T	rs76986962	C	T	C	Sox2_MA0143.3	23	0	-	0	0	.
chr6	141077940	141077941	chr6:141077941:T:C	rs9321798	T	C	T	Sox2_MA0143.3	-11	0	-	0	0	.
chr6	141421032	141421033	chr6:141421033:C:T	rs10457720	C	T	C	Sox2_MA0143.3	1	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr6	141513774	141513775	chr6:141513775:T:G	rs10223657	T	G	T	Sox2_MA0143.3	14	0	-	0	0	.
chr6	141527228	141527229	chr6:141527229:T:G	rs12210334	T	G	T	Sox2_MA0143.3	12	0	+	0	0	.
chr6	141969497	141969498	chr6:141969498:G:A	rs111338110	G	A	G	Sox2_MA0143.3	24	0	+	0	0	.
chr6	142278995	142278996	chr6:142278996:C:G	rs75801211	C	G	C	Sox2_MA0143.3	26	0	+	0	0	.
chr6	142378285	142378286	chr6:142378286:C:T	rs77339265	C	T	C	Sox2_MA0143.3	11	0	+	0	0	.
chr6	142384671	142384672	chr6:142384672:A:G	rs72988333	A	G	A	Sox2_MA0143.3	3	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr6	142632800	142632801	chr6:142632801:G:A	rs263138	G	A	G	Sox2_MA0143.3	13	0	-	0	0	.
chr6	142632819	142632820	chr6:142632820:A:G	rs263137	A	G	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr6	142756633	142756634	chr6:142756634:C:T	rs112306239	C	T	C	Sox2_MA0143.3	15	0	+	0	0	.
chr6	142827132	142827133	chr6:142827133:C:T	rs573352	C	T	T	Sox2_MA0143.3	-14	0	+	0	0	.
chr6	142845932	142845933	chr6:142845933:G:A	rs12210301	G	A	G	Sox2_MA0143.3	9	0	-	0	0	.
chr6	142913837	142913838	chr6:142913838:C:T	rs34431998	C	T	C	Sox2_MA0143.3	26	0	+	0	0	.
chr6	142955157	142955158	chr6:142955158:G:A	rs11751124	G	A	G	Sox2_MA0143.3	8	0	+	0	0	.
chr6	143063120	143063121	chr6:143063121:T:C	rs3804527	T	C	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr6	143159605	143159606	chr6:143159606:G:T	rs6908441	G	T	G	Sox2_MA0143.3	26	0	-	0	0	.
chr6	143167266	143167267	chr6:143167267:G:A	rs2876550	G	A	A	Sox2_MA0143.3	-11	0	+	0	0	.
chr6	143183497	143183498	chr6:143183498:A:G	rs144483394	A	G	A	Sox2_MA0143.3	4	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr6	143228783	143228784	chr6:143228784:C:T	rs9376731	C	T	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr6	143287445	143287446	chr6:143287446:G:A	rs12175842	G	A	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr6	143336478	143336479	chr6:143336479:G:C	rs9403485	G	C	G	Sox2_MA0143.3	11	0	+	0	0	.
chr6	143363466	143363467	chr6:143363467:A:G	rs6927966	A	G	A	Sox2_MA0143.3	-12	0	-	0	0	.
chr6	143447370	143447371	chr6:143447371:C:T	rs9496639	C	T	C	Sox2_MA0143.3	22	0	+	0	0	.
chr6	143498871	143498872	chr6:143498872:G:A	rs2143137	G	A	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr6	143531905	143531906	chr6:143531906:G:A	rs73582360	G	A	G	Sox2_MA0143.3	23	0	-	0	0	.
chr6	143532300	143532301	chr6:143532301:G:A	rs9403499	G	A	A	Sox2_MA0143.3	-11	0	-	0	0	.
chr6	143532301	143532302	chr6:143532302:T:C	rs78754976	T	C	T	Sox2_MA0143.3	-12	0	-	0	0	.
chr6	143534878	143534879	chr6:143534879:G:A	rs4896664	G	A	A	Sox2_MA0143.3	11	0	+	0	0	.
chr6	143583554	143583555	chr6:143583555:T:C	rs4142501	T	C	T	Sox2_MA0143.3	-7	0	+	0	0	.
chr6	143727338	143727339	chr6:143727339:T:C	rs12209142	T	C	T	Sox2_MA0143.3	22	0	+	0	0	.
chr6	143937221	143937222	chr6:143937222:T:C	rs7761382	T	C	C	Sox2_MA0143.3	21	0	+	0	0	.
chr6	144064229	144064230	chr6:144064230:G:A	rs868114544	G	A	G	Sox2_MA0143.3	8	0	-	0	0	.
chr6	144133659	144133660	chr6:144133660:G:A	rs6570607	G	A	A	Sox2_MA0143.3	15	0	-	0	0	.
chr6	144153508	144153509	chr6:144153509:A:G	rs7761440	A	G	A	Sox2_MA0143.3	21	0	-	0	0	.
chr6	144217451	144217452	chr6:144217452:A:G	rs948745334	A	G	A	Sox2_MA0143.3	-8	0	+	0	0	.
chr6	144265609	144265610	chr6:144265610:C:T	rs7767688	C	T	c	Sox2_MA0143.3	16	0	+	0	0	.
chr6	144285272	144285273	chr6:144285273:G:C	rs118185303	G	C	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr6	144315654	144315655	chr6:144315655:T:C	rs548612274	T	C	T	Sox2_MA0143.3	-9	0	+	0	0	.
chr6	144350026	144350027	chr6:144350027:C:T	rs74464845	C	T	C	Sox2_MA0143.3	8	0	+	0	0	.
chr6	144350034	144350035	chr6:144350035:A:T	rs949414219	A	T	A	Sox2_MA0143.3	16	0	+	0	0	.
chr6	144416533	144416534	chr6:144416534:C:T	rs4896716	C	T	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr6	144416564	144416565	chr6:144416565:C:A	rs138121311	C	A	C	Sox2_MA0143.3	25	0	+	0	0	.
chr6	144757896	144757897	chr6:144757897:A:G	rs17074128	A	G	A	Sox2_MA0143.3	-17	0	+	0	0	.
chr6	144954192	144954193	chr6:144954193:G:A	rs111348024	G	A	g	Sox2_MA0143.3	-6	0	-	0	0	.
chr6	145028051	145028052	chr6:145028052:T:A	rs2876601	T	A	A	Sox2_MA0143.3	21	0	-	0	0	.
chr6	145051886	145051887	chr6:145051887:G:A	rs577534767	G	A	G	Sox2_MA0143.3	7	1	+	8.864090315184848	3.5547341015215945	CCTTTGTG
chr6	145097267	145097268	chr6:145097268:C:A	rs627131	C	A	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr6	145391403	145391404	chr6:145391404:C:G	rs4896799	C	G	C	Sox2_MA0143.3	12	0	+	0	0	.
chr6	145531272	145531273	chr6:145531273:T:C	rs412350	T	C	t	Sox2_MA0143.3	6	1	+	9.206767037375712	2.298012258060492	CCTTTGTC
chr6	145689927	145689928	chr6:145689928:C:T	rs9376957	C	T	C	Sox2_MA0143.3	10	0	-	0	0	.
chr6	145882587	145882588	chr6:145882588:C:T	rs2254257	C	T	C	Sox2_MA0143.3	5	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr6	145900616	145900617	chr6:145900617:A:G	rs2265919	A	G	G	Sox2_MA0143.3	2	1	+	9.019595766176417	2.900948058900136	CCATTGTC
chr6	146112690	146112691	chr6:146112691:C:T	rs9497453	C	T	C	Sox2_MA0143.3	27	0	+	0	0	.
chr6	146211735	146211736	chr6:146211736:T:C	rs990519	T	C	C	Sox2_MA0143.3	2	1	-	9.613475778572903	3.494828071296623	CCATTGTT
chr6	146282120	146282121	chr6:146282121:G:C	rs1016601	G	C	C	Sox2_MA0143.3	5	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr6	146429455	146429456	chr6:146429456:C:T	rs74342101	C	T	C	Sox2_MA0143.3	21	0	+	0	0	.
chr6	146433180	146433181	chr6:146433181:T:C	rs362818	T	C	T	Sox2_MA0143.3	12	0	+	0	0	.
chr6	146500536	146500537	chr6:146500537:G:A	rs12530379	G	A	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr6	146524137	146524138	chr6:146524138:G:T	rs912001	G	T	G	Sox2_MA0143.3	12	0	+	0	0	.
chr6	146865218	146865219	chr6:146865219:A:G	rs1543548	A	G	A	Sox2_MA0143.3	16	0	-	0	0	.
chr6	147002724	147002725	chr6:147002725:C:T	rs66459623	C	T	C	Sox2_MA0143.3	-20	0	-	0	0	.
chr6	147022262	147022263	chr6:147022263:T:C	rs147541417	T	C	T	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr6	147217205	147217206	chr6:147217206:T:G	rs117620146	T	G	T	Sox2_MA0143.3	26	0	+	0	0	.
chr6	147266088	147266089	chr6:147266089:A:G	rs10457811	A	G	A	Sox2_MA0143.3	10	0	-	0	0	.
chr6	147637920	147637921	chr6:147637921:T:A	rs10872602	T	A	A	Sox2_MA0143.3	26	0	+	0	0	.
chr6	147729098	147729099	chr6:147729099:G:A	rs73016103	G	A	G	Sox2_MA0143.3	22	0	+	0	0	.
chr6	147820848	147820849	chr6:147820849:C:T	rs62437504	C	T	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr6	147821445	147821446	chr6:147821446:A:C	rs6914349	A	C	C	Sox2_MA0143.3	27	0	-	0	0	.
chr6	147849910	147849911	chr6:147849911:C:T	rs140615765	C	T	C	Sox2_MA0143.3	11	0	-	0	0	.
chr6	147937127	147937128	chr6:147937128:C:T	rs647757	C	T	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr6	147955413	147955414	chr6:147955414:A:G	rs12208841	A	G	A	Sox2_MA0143.3	-19	0	+	0	0	.
chr6	148102942	148102943	chr6:148102943:A:T	rs77308398	A	T	A	Sox2_MA0143.3	-10	0	-	0	0	.
chr6	148342211	148342212	chr6:148342212:T:C	rs571556549	T	C	T	Sox2_MA0143.3	2	1	-	9.613475778572903	3.494828071296623	CCATTGTT
chr6	148405609	148405610	chr6:148405610:T:C	rs9373560	T	C	T	Sox2_MA0143.3	24	0	+	0	0	.
chr6	148416093	148416094	chr6:148416094:G:T	rs6910915	G	T	G	Sox2_MA0143.3	22	0	+	0	0	.
chr6	148426499	148426500	chr6:148426500:C:T	rs2473561	C	T	C	Sox2_MA0143.3	10	0	+	0	0	.
chr6	148514292	148514293	chr6:148514293:T:G	rs202111293	T	G	T	Sox2_MA0143.3	-13	0	+	0	0	.
chr6	148538151	148538152	chr6:148538152:A:G	rs9498061	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr6	148581014	148581015	chr6:148581015:T:C	rs208699	T	C	C	Sox2_MA0143.3	4	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr6	148714489	148714490	chr6:148714490:C:A	rs9386232	C	A	C	Sox2_MA0143.3	20	0	+	0	0	.
chr6	148723637	148723638	chr6:148723638:G:A	chr6:148723638:G:A	G	A	T	Sox2_MA0143.3	13	0	-	0	0	.
chr6	148723637	148723638	chr6:148723638:G:T	rs73598946	G	T	T	Sox2_MA0143.3	13	0	-	0	0	.
chr6	148793859	148793860	chr6:148793860:A:G	rs11753679	A	G	A	Sox2_MA0143.3	11	0	+	0	0	.
chr6	148831170	148831171	chr6:148831171:G:A	rs115561426	G	A	G	Sox2_MA0143.3	20	0	+	0	0	.
chr6	148979315	148979316	chr6:148979316:T:C	rs2500520	T	C	T	Sox2_MA0143.3	7	1	-	3.5547341015215945	8.864090315184848	CCTTTGTA
chr6	149014872	149014873	chr6:149014873:C:T	rs2486416	C	T	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr6	149014898	149014899	chr6:149014899:A:G	rs113166350	A	G	A	Sox2_MA0143.3	25	0	+	0	0	.
chr6	149029026	149029027	chr6:149029027:C:A	rs189168483	C	A	C	Sox2_MA0143.3	24	0	+	0	0	.
chr6	149029028	149029029	chr6:149029029:C:G	rs748900699	C	G	C	Sox2_MA0143.3	26	0	+	0	0	.
chr6	149088723	149088724	chr6:149088724:T:C	rs1320575	T	C	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr6	149151922	149151923	chr6:149151923:C:T	rs4283906	C	T	T	Sox2_MA0143.3	10	0	-	0	0	.
chr6	149154570	149154571	chr6:149154571:C:T	rs73779024	C	T	C	Sox2_MA0143.3	27	0	+	0	0	.
chr6	149203744	149203745	chr6:149203745:T:A	rs650387	T	A	T	Sox2_MA0143.3	13	0	-	0	0	.
chr6	149236076	149236077	chr6:149236077:A:G	rs6907745	A	G	G	Sox2_MA0143.3	6	1	-	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr6	149395035	149395036	chr6:149395036:A:G	rs237032	A	G	A	Sox2_MA0143.3	-10	0	+	0	0	.
chr6	149444010	149444011	chr6:149444011:T:A	rs57485886	T	A	T	Sox2_MA0143.3	-17	0	+	0	0	.
chr6	149465931	149465932	chr6:149465932:A:T	rs56383785	A	T	A	Sox2_MA0143.3	-11	0	+	0	0	.
chr6	149477229	149477230	chr6:149477230:C:G	rs444784	C	G	G	Sox2_MA0143.3	17	0	-	0	0	.
chr6	149477241	149477242	chr6:149477242:C:T	rs571070879	C	T	C	Sox2_MA0143.3	5	1	-	9.613475778572903	2.7047209992576837	CCATTGTT
chr6	149718759	149718760	chr6:149718760:G:A	rs138024221	G	A	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr6	149724056	149724057	chr6:149724057:G:A	rs113956947	G	A	G	Sox2_MA0143.3	24	0	-	0	0	.
chr6	149821814	149821815	chr6:149821815:A:G	rs1413655	A	G	A	Sox2_MA0143.3	20	0	+	0	0	.
chr6	149831356	149831357	chr6:149831357:T:C	rs6903998	T	C	T	Sox2_MA0143.3	4	1	+	3.5547341015215945	-3.3540206777936254	CCTTTGTA
chr6	149846734	149846735	chr6:149846735:T:C	rs2210683	T	C	C	Sox2_MA0143.3	23	0	-	0	0	.
chr6	149920802	149920803	chr6:149920803:T:C	rs140889250	T	C	t	Sox2_MA0143.3	-3	0	-	0	0	.
chr6	149941857	149941858	chr6:149941858:T:C	rs4594959	T	C	C	Sox2_MA0143.3	11	0	-	0	0	.
chr6	149941859	149941860	chr6:149941860:G:A	rs4133316	G	A	G	Sox2_MA0143.3	9	0	-	0	0	.
chr6	149962026	149962027	chr6:149962027:C:T	rs10499261	C	T	T	Sox2_MA0143.3	-16	0	+	0	0	.
chr6	149983172	149983173	chr6:149983173:G:A	rs10457857	G	A	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr6	150054925	150054926	chr6:150054926:T:C	rs58308254	T	C	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr6	150068459	150068460	chr6:150068460:G:T	rs2181921	G	T	G	Sox2_MA0143.3	27	0	-	0	0	.
chr6	150084559	150084560	chr6:150084560:G:A	rs9397624	G	A	G	Sox2_MA0143.3	10	0	+	0	0	.
chr6	150274398	150274399	chr6:150274399:T:C	rs73779931	T	C	T	Sox2_MA0143.3	-7	0	+	0	0	.
chr6	150297258	150297259	chr6:150297259:G:C	rs11965959	G	C	G	Sox2_MA0143.3	21	0	+	0	0	.
chr6	150303034	150303035	chr6:150303035:C:T	rs77396022	C	T	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr6	150395312	150395313	chr6:150395313:G:A	rs1556882	G	A	A	Sox2_MA0143.3	-14	0	-	0	0	.
chr6	150567584	150567585	chr6:150567585:C:A	rs62432618	C	A	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr6	150576050	150576051	chr6:150576051:G:A	rs10457082	G	A	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr6	150576095	150576096	chr6:150576096:T:C	rs9322267	T	C	C	Sox2_MA0143.3	26	0	+	0	0	.
chr6	150589290	150589291	chr6:150589291:G:A	rs4463268	G	A	A	Sox2_MA0143.3	27	0	+	0	0	.
chr6	150668424	150668425	chr6:150668425:A:G	chr6:150668425:A:G	A	G	A	Sox2_MA0143.3	26	0	+	0	0	.
chr6	150668649	150668650	chr6:150668650:G:A	rs180978919	G	A	G	Sox2_MA0143.3	23	0	-	0	0	.
chr6	150668991	150668992	chr6:150668992:A:G	rs185172259	A	G	A	Sox2_MA0143.3	2	1	+	9.613475778572903	3.494828071296623	CCATTGTT
chr6	150753780	150753781	chr6:150753781:G:A	rs57798861	G	A	G	Sox2_MA0143.3	24	0	+	0	0	.
chr6	150764699	150764700	chr6:150764700:G:A	rs9371471	G	A	G	Sox2_MA0143.3	20	0	+	0	0	.
chr6	150806968	150806969	chr6:150806969:C:G	rs6924094	C	G	C	Sox2_MA0143.3	1	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr6	150813888	150813889	chr6:150813889:G:C	rs140018871	G	C	G	Sox2_MA0143.3	26	0	-	0	0	.
chr6	150814248	150814249	chr6:150814249:A:G	rs79102053	A	G	A	Sox2_MA0143.3	2	1	+	9.613475778572903	3.494828071296623	CCATTGTT
chr6	150878657	150878658	chr6:150878658:C:T	rs76822286	C	T	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr6	151001230	151001231	chr6:151001231:C:T	rs9478907	C	T	T	Sox2_MA0143.3	15	0	+	0	0	.
chr6	151009679	151009680	chr6:151009680:T:C	rs113062858	T	C	T	Sox2_MA0143.3	2	1	-	9.019595766176417	2.900948058900136	CCATTGTC
chr6	151026471	151026472	chr6:151026472:G:A	rs140998989	G	A	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr6	151068533	151068534	chr6:151068534:C:T	rs574618365	C	T	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr6	151087890	151087891	chr6:151087891:A:G	rs12216229	A	G	A	Sox2_MA0143.3	10	0	+	0	0	.
chr6	151092691	151092692	chr6:151092692:C:A	rs2295734	C	A	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr6	151098414	151098415	chr6:151098415:C:T	rs59103673	C	T	C	Sox2_MA0143.3	1	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr6	151205920	151205921	chr6:151205921:G:T	rs9478986	G	T	G	Sox2_MA0143.3	18	0	-	0	0	.
chr6	151275813	151275814	chr6:151275814:C:T	rs6938445	C	T	C	Sox2_MA0143.3	15	0	+	0	0	.
chr6	151285271	151285272	chr6:151285272:G:C	rs147997785	G	C	G	Sox2_MA0143.3	11	0	+	0	0	.
chr6	151310953	151310954	chr6:151310954:A:G	rs2473611	A	G	G	Sox2_MA0143.3	-3	0	-	0	0	.
chr6	151451259	151451260	chr6:151451260:T:A	rs6906678	T	A	T	Sox2_MA0143.3	-5	0	+	0	0	.
chr6	151633523	151633524	chr6:151633524:G:A	rs11753383	G	A	G	Sox2_MA0143.3	13	0	+	0	0	.
chr6	151691313	151691314	chr6:151691314:C:T	rs1172851706	C	T	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr6	151850762	151850763	chr6:151850763:A:G	rs4870057	A	G	A	Sox2_MA0143.3	17	0	+	0	0	.
chr6	151974003	151974004	chr6:151974004:A:G	rs117014788	A	G	A	Sox2_MA0143.3	21	0	+	0	0	.
chr6	152066528	152066529	chr6:152066529:G:A	rs3778082	G	A	A	Sox2_MA0143.3	-14	0	+	0	0	.
chr6	152071462	152071463	chr6:152071463:G:C	rs12199198	G	C	g	Sox2_MA0143.3	-17	0	+	0	0	.
chr6	152096006	152096007	chr6:152096007:G:A	rs9341056	G	A	G	Sox2_MA0143.3	18	0	+	0	0	.
chr6	152221826	152221827	chr6:152221827:T:C	rs9383977	T	C	T	Sox2_MA0143.3	-9	0	+	0	0	.
chr6	152368957	152368958	chr6:152368958:G:C	rs182453040	G	C	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr6	152491563	152491564	chr6:152491564:C:T	rs141370297	C	T	C	Sox2_MA0143.3	21	0	-	0	0	.
chr6	152567069	152567070	chr6:152567070:A:C	rs2950447	A	C	C	Sox2_MA0143.3	22	0	+	0	0	.
chr6	152696972	152696973	chr6:152696973:T:C	rs2800638	T	C	C	Sox2_MA0143.3	6	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr6	153056304	153056305	chr6:153056305:G:A	rs9371664	G	A	A	Sox2_MA0143.3	-11	0	-	0	0	.
chr6	153306697	153306698	chr6:153306698:G:A	rs9322419	G	A	G	Sox2_MA0143.3	8	0	+	0	0	.
chr6	153427198	153427199	chr6:153427199:C:T	rs270299	C	T	c	Sox2_MA0143.3	-5	0	+	0	0	.
chr6	153539567	153539568	chr6:153539568:A:G	rs1037774	A	G	A	Sox2_MA0143.3	-17	0	-	0	0	.
chr6	153725513	153725514	chr6:153725514:G:A	rs114312409	G	A	T	Sox2_MA0143.3	24	0	-	0	0	.
chr6	153847411	153847412	chr6:153847412:C:T	rs6938132	C	T	T	Sox2_MA0143.3	16	0	+	0	0	.
chr6	154167318	154167319	chr6:154167319:T:C	rs997813	T	C	T	Sox2_MA0143.3	-17	0	+	0	0	.
chr6	154167324	154167325	chr6:154167325:T:G	rs997812	T	G	G	Sox2_MA0143.3	-11	0	+	0	0	.
chr6	154245744	154245745	chr6:154245745:C:T	rs7755471	C	T	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr6	154257288	154257289	chr6:154257289:G:C	rs62433243	G	C	G	Sox2_MA0143.3	14	0	+	0	0	.
chr6	154436691	154436692	chr6:154436692:C:G	rs6935197	C	G	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr6	154440149	154440150	chr6:154440150:C:A	rs6911312	C	A	A	Sox2_MA0143.3	23	0	-	0	0	.
chr6	154493188	154493189	chr6:154493189:C:T	rs72999371	C	T	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr6	154493192	154493193	chr6:154493193:G:C	rs6899353	G	C	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr6	154516211	154516212	chr6:154516212:C:T	rs4566892	C	T	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr6	154569760	154569761	chr6:154569761:G:T	rs115671678	G	T	G	Sox2_MA0143.3	1	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr6	154878789	154878790	chr6:154878790:C:G	rs6923606	C	G	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr6	154896130	154896131	chr6:154896131:G:A	rs6918967	G	A	A	Sox2_MA0143.3	-15	0	-	0	0	.
chr6	154995593	154995594	chr6:154995594:C:T	rs112171593	C	T	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr6	155036971	155036972	chr6:155036972:G:A	rs7757762	G	A	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr6	155084791	155084792	chr6:155084792:T:C	rs7774465	T	C	T	Sox2_MA0143.3	-15	0	+	0	0	.
chr6	155120001	155120002	chr6:155120002:A:G	rs9371864	A	G	A	Sox2_MA0143.3	-7	0	-	0	0	.
chr6	155172310	155172311	chr6:155172311:A:G	rs73795340	A	G	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr6	155224086	155224087	chr6:155224087:C:T	rs78185866	C	T	C	Sox2_MA0143.3	22	0	+	0	0	.
chr6	155298106	155298107	chr6:155298107:A:G	rs11964387	A	G	A	Sox2_MA0143.3	16	0	-	0	0	.
chr6	155353194	155353195	chr6:155353195:T:G	rs335419	T	G	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr6	155405201	155405202	chr6:155405202:C:T	rs117096202	C	T	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr6	155437100	155437101	chr6:155437101:C:T	rs2073012	C	T	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr6	155444337	155444338	chr6:155444338:A:C	rs112661586	A	C	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr6	155444356	155444357	chr6:155444357:T:A	rs142588324	T	A	T	Sox2_MA0143.3	15	0	+	0	0	.
chr6	155494505	155494506	chr6:155494506:G:C	rs6557425	G	C	G	Sox2_MA0143.3	8	0	-	0	0	.
chr6	155782678	155782679	chr6:155782679:T:A	rs73582747	T	A	A	Sox2_MA0143.3	-16	0	+	0	0	.
chr6	155782712	155782713	chr6:155782713:T:A	rs73582749	T	A	T	Sox2_MA0143.3	18	0	+	0	0	.
chr6	155821439	155821440	chr6:155821440:C:T	rs7757357	C	T	C	Sox2_MA0143.3	26	0	+	0	0	.
chr6	155859044	155859045	chr6:155859045:A:G	rs7748866	A	G	A	Sox2_MA0143.3	9	0	-	0	0	.
chr6	156069438	156069439	chr6:156069439:A:G	rs17765881	A	G	A	Sox2_MA0143.3	12	0	+	0	0	.
chr6	156183887	156183888	chr6:156183888:C:T	rs10499284	C	T	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr6	156252626	156252627	chr6:156252627:T:C	rs114393047	T	C	T	Sox2_MA0143.3	25	0	+	0	0	.
chr6	156254276	156254277	chr6:156254277:T:C	rs2818064	T	C	C	Sox2_MA0143.3	26	0	+	0	0	.
chr6	156267946	156267947	chr6:156267947:C:T	rs73003758	C	T	T	Sox2_MA0143.3	17	0	-	0	0	.
chr6	156338947	156338948	chr6:156338948:C:G	rs9397293	C	G	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr6	156430336	156430337	chr6:156430337:A:T	rs4565318	A	T	A	Sox2_MA0143.3	17	0	-	0	0	.
chr6	156487901	156487902	chr6:156487902:C:A	rs2819066	C	A	C	Sox2_MA0143.3	27	0	-	0	0	.
chr6	156545986	156545987	chr6:156545987:G:T	rs7750601	G	T	G	Sox2_MA0143.3	5	1	+	8.676919043985553	1.7681642646703324	CCATTGTG
chr6	156565520	156565521	chr6:156565521:C:T	rs288944	C	T	C	Sox2_MA0143.3	1	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr6	156777089	156777090	chr6:156777090:T:C	rs73013281	T	C	T	Sox2_MA0143.3	15	0	+	0	0	.
chr6	156932229	156932230	chr6:156932230:C:T	rs9322590	C	T	T	Sox2_MA0143.3	1	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr6	156933305	156933306	chr6:156933306:C:G	rs4615403	C	G	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr6	156982311	156982312	chr6:156982312:C:A	rs117654067	C	A	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr6	157021661	157021662	chr6:157021662:G:A	rs148425023	G	A	-	Sox2_MA0143.3	24	0	+	0	0	.
chr6	157063389	157063390	chr6:157063390:A:G	rs114153391	A	G	A	Sox2_MA0143.3	-16	0	-	0	0	.
chr6	157097825	157097826	chr6:157097826:G:A	rs7763624	G	A	A	Sox2_MA0143.3	7	1	+	8.864090315184848	3.5547341015215945	CCTTTGTG
chr6	157126179	157126180	chr6:157126180:A:G	rs7747451	A	G	A	Sox2_MA0143.3	7	1	+	3.5547341015215945	8.864090315184848	CCTTTGTA
chr6	157143710	157143711	chr6:157143711:G:A	rs9480450	G	A	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr6	157144153	157144154	chr6:157144154:G:T	rs146520023	G	T	G	Sox2_MA0143.3	-11	0	+	0	0	.
chr6	157151214	157151215	chr6:157151215:A:G	rs6911458	A	G	G	Sox2_MA0143.3	11	0	+	0	0	.
chr6	157162954	157162955	chr6:157162955:C:T	rs74896098	C	T	C	Sox2_MA0143.3	24	0	+	0	0	.
chr6	157198697	157198698	chr6:157198698:A:G	rs112324115	A	G	G	Sox2_MA0143.3	23	0	+	0	0	.
chr6	157330001	157330002	chr6:157330002:C:T	rs79964909	C	T	C	Sox2_MA0143.3	27	0	+	0	0	.
chr6	157372430	157372431	chr6:157372431:T:A	rs2749674	T	A	A	Sox2_MA0143.3	-9	0	-	0	0	.
chr6	157380007	157380008	chr6:157380008:T:A	rs2800446	T	A	T	Sox2_MA0143.3	16	0	+	0	0	.
chr6	157399333	157399334	chr6:157399334:T:C	rs149999954	T	C	T	Sox2_MA0143.3	3	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr6	157429848	157429849	chr6:157429849:C:T	rs9364987	C	T	T	Sox2_MA0143.3	5	1	-	9.019595766176417	2.110840986861197	CCATTGTC
chr6	157455882	157455883	chr6:157455883:C:T	rs9347277	C	T	C	Sox2_MA0143.3	19	0	+	0	0	.
chr6	157466404	157466405	chr6:157466405:G:A	rs9393134	G	A	G	Sox2_MA0143.3	23	0	+	0	0	.
chr6	157535434	157535435	chr6:157535435:C:T	rs9331341	C	T	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr6	157535930	157535931	chr6:157535931:G:A	rs9456445	G	A	A	Sox2_MA0143.3	-14	0	+	0	0	.
chr6	157541641	157541642	chr6:157541642:C:T	rs2174502	C	T	C	Sox2_MA0143.3	8	0	-	0	0	.
chr6	157549909	157549910	chr6:157549910:A:T	rs951297	A	T	A	Sox2_MA0143.3	16	0	+	0	0	.
chr6	157632551	157632552	chr6:157632552:A:C	rs62423255	A	C	A	Sox2_MA0143.3	-1	0	-	0	0	.
chr6	157657017	157657018	chr6:157657018:A:G	rs7766266	A	G	G	Sox2_MA0143.3	27	0	-	0	0	.
chr6	157714347	157714348	chr6:157714348:C:T	rs147773165	C	T	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr6	157734691	157734692	chr6:157734692:A:G	rs9458344	A	G	G	Sox2_MA0143.3	14	0	-	0	0	.
chr6	157758608	157758609	chr6:157758609:C:T	rs598898	C	T	T	Sox2_MA0143.3	13	0	-	0	0	.
chr6	157813577	157813578	chr6:157813578:C:T	rs60482949	C	T	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr6	157824453	157824454	chr6:157824454:C:T	rs3805755	C	T	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr6	157830441	157830442	chr6:157830442:T:C	rs10945857	T	C	T	Sox2_MA0143.3	15	0	+	0	0	.
chr6	157962103	157962104	chr6:157962104:A:G	rs4518526	A	G	G	Sox2_MA0143.3	16	0	+	0	0	.
chr6	157976020	157976021	chr6:157976021:G:T	rs9459003	G	T	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr6	157976026	157976027	chr6:157976027:C:A	rs34867799	C	A	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr6	157989575	157989576	chr6:157989576:G:A	rs563859360	G	A	G	Sox2_MA0143.3	25	0	-	0	0	.
chr6	158008159	158008160	chr6:158008160:A:G	rs944365608	A	G	A	Sox2_MA0143.3	17	0	+	0	0	.
chr6	158010788	158010789	chr6:158010789:G:A	rs117843523	G	A	g	Sox2_MA0143.3	-14	0	-	0	0	.
chr6	158026979	158026980	chr6:158026980:G:C	chr6:158026980:G:C	G	C	G	Sox2_MA0143.3	21	0	+	0	0	.
chr6	158068207	158068208	chr6:158068208:C:T	rs1750047	C	T	C	Sox2_MA0143.3	13	0	+	0	0	.
chr6	158110135	158110136	chr6:158110136:A:G	rs2502607	A	G	A	Sox2_MA0143.3	-12	0	-	0	0	.
chr6	158201052	158201053	chr6:158201053:G:A	rs71563798	G	A	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr6	158207655	158207656	chr6:158207656:C:T	rs114059209	C	T	C	Sox2_MA0143.3	19	0	-	0	0	.
chr6	158262279	158262280	chr6:158262280:G:A	rs745146	G	A	G	Sox2_MA0143.3	15	0	+	0	0	.
chr6	158286363	158286364	chr6:158286364:T:C	rs827858	T	C	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr6	158431787	158431788	chr6:158431788:G:A	rs341098	G	A	G	Sox2_MA0143.3	12	0	-	0	0	.
chr6	158460731	158460732	chr6:158460732:C:G	rs602698	C	G	C	Sox2_MA0143.3	13	0	+	0	0	.
chr6	158517870	158517871	chr6:158517871:C:T	rs9456308	C	T	T	Sox2_MA0143.3	13	0	-	0	0	.
chr6	158536680	158536681	chr6:158536681:G:A	rs199707996	G	A	G	Sox2_MA0143.3	15	0	-	0	0	.
chr6	158545263	158545264	chr6:158545264:T:G	rs2033969	T	G	T	Sox2_MA0143.3	7	1	+	9.613475778572903	8.676919043985553	CCATTGTT
chr6	158563728	158563729	chr6:158563729:A:G	rs894120	A	G	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr6	158594025	158594026	chr6:158594026:T:A	rs7738510	T	A	C	Sox2_MA0143.3	10	0	+	0	0	.
chr6	158608309	158608310	chr6:158608310:G:C	rs6925091	G	C	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr6	158642727	158642728	chr6:158642728:C:A	rs3757077	C	A	A	Sox2_MA0143.3	19	0	-	0	0	.
chr6	158684478	158684479	chr6:158684479:G:A	rs59688922	G	A	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr6	158714870	158714871	chr6:158714871:G:C	rs13214272	G	C	C	Sox2_MA0143.3	24	0	-	0	0	.
chr6	158720734	158720735	chr6:158720735:G:T	rs117938288	G	T	G	Sox2_MA0143.3	20	0	+	0	0	.
chr6	158769543	158769544	chr6:158769544:C:A	rs145976670	C	A	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr6	158769563	158769564	chr6:158769564:A:T	rs41267745	A	T	A	Sox2_MA0143.3	2	1	+	8.676919043985553	8.864090315184848	CCATTGTG
chr6	158771086	158771087	chr6:158771087:C:T	rs6942167	C	T	c	Sox2_MA0143.3	15	0	-	0	0	.
chr6	158771087	158771088	chr6:158771088:G:A	rs115968903	G	A	G	Sox2_MA0143.3	14	0	-	0	0	.
chr6	158820518	158820519	chr6:158820519:C:T	rs73013642	C	T	C	Sox2_MA0143.3	24	0	+	0	0	.
chr6	158826517	158826518	chr6:158826518:C:G	rs1471835	C	G	G	Sox2_MA0143.3	24	0	+	0	0	.
chr6	158869351	158869352	chr6:158869352:G:A	rs6455608	G	A	G	Sox2_MA0143.3	21	0	+	0	0	.
chr6	158885085	158885086	chr6:158885086:T:C	rs9355682	T	C	T	Sox2_MA0143.3	11	0	-	0	0	.
chr6	158922119	158922120	chr6:158922120:T:C	rs4709245	T	C	T	Sox2_MA0143.3	4	1	+	3.5547341015215945	-3.3540206777936254	CCTTTGTA
chr6	158940056	158940057	chr6:158940057:C:G	rs74410979	C	G	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr6	159039542	159039543	chr6:159039543:A:G	rs1328488104	A	G	A	Sox2_MA0143.3	20	0	+	0	0	.
chr6	159051116	159051117	chr6:159051117:G:A	rs212403	G	A	A	Sox2_MA0143.3	13	0	+	0	0	.
chr6	159093220	159093221	chr6:159093221:T:C	rs1994564	T	C	T	Sox2_MA0143.3	17	0	+	0	0	.
chr6	159098847	159098848	chr6:159098848:T:C	rs113284501	T	C	T	Sox2_MA0143.3	-14	0	-	0	0	.
chr6	159107099	159107100	chr6:159107100:C:G	rs7748054	C	G	G	Sox2_MA0143.3	-3	0	+	0	0	.
chr6	159110311	159110312	chr6:159110312:G:A	rs6455616	G	A	G	Sox2_MA0143.3	11	0	-	0	0	.
chr6	159169103	159169104	chr6:159169104:C:T	rs115335628	C	T	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr6	159305342	159305343	chr6:159305343:T:C	rs9364510	T	C	T	Sox2_MA0143.3	21	0	-	0	0	.
chr6	159312415	159312416	chr6:159312416:G:A	rs905685	G	A	A	Sox2_MA0143.3	-14	0	+	0	0	.
chr6	159312447	159312448	chr6:159312448:G:A	rs57269986	G	A	G	Sox2_MA0143.3	18	0	+	0	0	.
chr6	159436794	159436795	chr6:159436795:C:T	rs550509594	C	T	C	Sox2_MA0143.3	17	0	-	0	0	.
chr6	159525642	159525643	chr6:159525643:T:C	rs408301	T	C	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr6	159762566	159762567	chr6:159762567:G:C	rs535639131	G	C	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr6	159772432	159772433	chr6:159772433:T:C	rs7758895	T	C	C	Sox2_MA0143.3	14	0	-	0	0	.
chr6	159789475	159789476	chr6:159789476:G:A	rs375606704	G	A	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr6	159808834	159808835	chr6:159808835:C:T	rs41267787	C	T	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr6	159808856	159808857	chr6:159808857:T:C	rs35872675	T	C	T	Sox2_MA0143.3	6	1	+	9.613475778572903	2.7047209992576837	CCATTGTT
chr6	159848628	159848629	chr6:159848629:A:G	rs2342863	A	G	A	Sox2_MA0143.3	27	0	-	0	0	.
chr6	159848658	159848659	chr6:159848659:T:A	rs2342864	T	A	A	Sox2_MA0143.3	-3	0	-	0	0	.
chr6	159961714	159961715	chr6:159961715:C:T	rs113780489	C	T	C	Sox2_MA0143.3	13	0	-	0	0	.
chr6	159972837	159972838	chr6:159972838:T:A	rs3798209	T	A	A	Sox2_MA0143.3	-2	0	-	0	0	.
chr6	159980629	159980630	chr6:159980630:G:A	rs10455861	G	A	G	Sox2_MA0143.3	25	0	+	0	0	.
chr6	160065459	160065460	chr6:160065460:G:A	rs79669113	G	A	G	Sox2_MA0143.3	21	0	+	0	0	.
chr6	160096855	160096856	chr6:160096856:C:T	rs998203	C	T	T	Sox2_MA0143.3	-8	0	+	0	0	.
chr6	160146895	160146896	chr6:160146896:G:T	rs3798167	G	T	G	Sox2_MA0143.3	5	1	+	9.019595766176417	2.110840986861197	CCATTGTC
chr6	160363803	160363804	chr6:160363804:A:C	rs2665353	A	C	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr6	160494733	160494734	chr6:160494734:G:A	rs374748020	G	A	G	Sox2_MA0143.3	9	0	+	0	0	.
chr6	160553545	160553546	chr6:160553546:G:A	rs12207195	G	A	g	Sox2_MA0143.3	5	1	+	9.613475778572903	2.7047209992576837	CCATTGTT
chr6	160845480	160845481	chr6:160845481:A:G	rs12173859	A	G	N	Sox2_MA0143.3	-18	0	+	0	0	.
chr6	160918914	160918915	chr6:160918915:G:A	rs73019797	G	A	G	Sox2_MA0143.3	21	0	+	0	0	.
chr6	160972341	160972342	chr6:160972342:C:T	chr6:160972342:C:T	C	T	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr6	161016742	161016743	chr6:161016743:T:C	rs583856	T	C	C	Sox2_MA0143.3	6	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr6	161031710	161031711	chr6:161031711:G:A	rs7760056	G	A	A	Sox2_MA0143.3	5	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr6	161078460	161078461	chr6:161078461:G:A	rs13194157	G	A	A	Sox2_MA0143.3	-2	0	-	0	0	.
chr6	161140223	161140224	chr6:161140224:G:T	rs1807426	G	T	T	Sox2_MA0143.3	-4	0	-	0	0	.
chr6	161430131	161430132	chr6:161430132:A:C	rs4263565	A	C	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr6	161434569	161434570	chr6:161434570:C:T	rs59485988	C	T	C	Sox2_MA0143.3	23	0	-	0	0	.
chr6	161443966	161443967	chr6:161443967:C:T	rs137908243	C	T	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr6	161480646	161480647	chr6:161480647:T:C	rs7774267	T	C	T	Sox2_MA0143.3	4	1	+	3.5547341015215945	-3.3540206777936254	CCTTTGTA
chr6	161489826	161489827	chr6:161489827:T:C	rs10455887	T	C	C	Sox2_MA0143.3	7	1	-	3.5547341015215945	8.864090315184848	CCTTTGTA
chr6	161568870	161568871	chr6:161568871:A:C	rs885782	A	C	A	Sox2_MA0143.3	-15	0	+	0	0	.
chr6	161599242	161599243	chr6:161599243:A:G	rs1883874	A	G	A	Sox2_MA0143.3	27	0	-	0	0	.
chr6	161618894	161618895	chr6:161618895:A:C	rs9355915	A	C	A	Sox2_MA0143.3	13	0	-	0	0	.
chr6	161618916	161618917	chr6:161618917:G:A	rs547804823	G	A	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr6	161626828	161626829	chr6:161626829:G:C	rs1884154	G	C	G	Sox2_MA0143.3	1	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr6	161699720	161699721	chr6:161699721:T:A	rs56065723	T	A	a	Sox2_MA0143.3	26	0	-	0	0	.
chr6	161743624	161743625	chr6:161743625:G:A	rs11755949	G	A	G	Sox2_MA0143.3	12	0	+	0	0	.
chr6	161917856	161917857	chr6:161917857:G:T	rs9355967	G	T	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr6	161944308	161944309	chr6:161944309:T:G	rs1790023	T	G	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr6	162136686	162136687	chr6:162136687:A:G	rs12193568	A	G	A	Sox2_MA0143.3	17	0	+	0	0	.
chr6	162177898	162177899	chr6:162177899:C:T	rs9458474	C	T	C	Sox2_MA0143.3	16	0	+	0	0	.
chr6	162227062	162227063	chr6:162227063:G:A	rs74384373	G	A	G	Sox2_MA0143.3	10	0	-	0	0	.
chr6	162227086	162227087	chr6:162227087:A:G	rs949445039	A	G	A	Sox2_MA0143.3	-14	0	-	0	0	.
chr6	162312719	162312720	chr6:162312720:T:C	rs7752706	T	C	C	Sox2_MA0143.3	6	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr6	162320004	162320005	chr6:162320005:A:C	rs73598195	A	C	A	Sox2_MA0143.3	19	0	+	0	0	.
chr6	162368164	162368165	chr6:162368165:G:A	rs7768039	G	A	G	Sox2_MA0143.3	-3	0	-	0	0	.
chr6	162423433	162423434	chr6:162423434:T:A	rs2205624	T	A	T	Sox2_MA0143.3	-2	0	+	0	0	.
chr6	162445944	162445945	chr6:162445945:C:T	rs6905594	C	T	C	Sox2_MA0143.3	5	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr6	162462330	162462331	chr6:162462331:A:G	rs12174063	A	G	G	Sox2_MA0143.3	-3	0	-	0	0	.
chr6	162494147	162494148	chr6:162494148:T:C	rs10945839	T	C	C	Sox2_MA0143.3	14	0	+	0	0	.
chr6	162497532	162497533	chr6:162497533:C:T	rs551497146	C	T	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr6	162532792	162532793	chr6:162532793:G:A	rs66507030	G	A	G	Sox2_MA0143.3	1	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr6	162554842	162554843	chr6:162554843:C:T	rs2846478	C	T	C	Sox2_MA0143.3	5	1	-	9.613475778572903	2.7047209992576837	CCATTGTT
chr6	162810051	162810052	chr6:162810052:T:C	rs9364672	T	C	C	Sox2_MA0143.3	26	0	-	0	0	.
chr6	162829516	162829517	chr6:162829517:A:G	rs13208648	A	G	A	Sox2_MA0143.3	-5	0	+	0	0	.
chr6	162882929	162882930	chr6:162882930:G:A	rs9295202	G	A	A	Sox2_MA0143.3	21	0	-	0	0	.
chr6	163128501	163128502	chr6:163128502:A:T	rs147273690	A	T	A	Sox2_MA0143.3	23	0	+	0	0	.
chr6	163151217	163151218	chr6:163151218:G:C	rs6921357	G	C	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr6	163219856	163219857	chr6:163219857:G:A	rs4709681	G	A	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr6	163309498	163309499	chr6:163309499:C:T	rs4708992	C	T	C	Sox2_MA0143.3	1	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr6	163311906	163311907	chr6:163311907:T:C	rs12529659	T	C	T	Sox2_MA0143.3	6	1	+	8.676919043985553	1.7681642646703326	CCATTGTG
chr6	163311922	163311923	chr6:163311923:G:A	rs143732157	G	A	G	Sox2_MA0143.3	22	0	+	0	0	.
chr6	163336706	163336707	chr6:163336707:A:G	rs13211237	A	G	g	Sox2_MA0143.3	20	0	+	0	0	.
chr6	163338458	163338459	chr6:163338459:G:A	rs4709706	G	A	G	Sox2_MA0143.3	-11	0	+	0	0	.
chr6	163349383	163349384	chr6:163349384:G:T	rs117083158	G	T	G	Sox2_MA0143.3	13	0	+	0	0	.
chr6	163349384	163349385	chr6:163349385:C:T	rs117264257	C	T	C	Sox2_MA0143.3	14	0	+	0	0	.
chr6	163371274	163371275	chr6:163371275:A:G	rs73787622	A	G	A	Sox2_MA0143.3	-12	0	-	0	0	.
chr6	163373618	163373619	chr6:163373619:C:T	rs1336224	C	T	C	Sox2_MA0143.3	23	0	+	0	0	.
chr6	163388604	163388605	chr6:163388605:C:T	rs118091256	C	T	C	Sox2_MA0143.3	25	0	-	0	0	.
chr6	163394157	163394158	chr6:163394158:C:T	rs1572434	C	T	T	Sox2_MA0143.3	25	0	+	0	0	.
chr6	163401404	163401405	chr6:163401405:G:C	rs566381322	G	C	G	Sox2_MA0143.3	14	0	-	0	0	.
chr6	163518292	163518293	chr6:163518293:T:G	rs112912796	T	G	T	Sox2_MA0143.3	14	0	+	0	0	.
chr6	163554961	163554962	chr6:163554962:T:G	rs115441511	T	G	T	Sox2_MA0143.3	7	1	+	9.800647049772198	8.864090315184848	CCTTTGTT
chr6	163591019	163591020	chr6:163591020:T:C	rs7761240	T	C	C	Sox2_MA0143.3	27	0	-	0	0	.
chr6	163603621	163603622	chr6:163603622:G:A	rs66492083	G	A	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr6	163636127	163636128	chr6:163636128:G:T	rs7771940	G	T	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr6	163637503	163637504	chr6:163637504:C:T	rs6902205	C	T	C	Sox2_MA0143.3	8	0	+	0	0	.
chr6	163645581	163645582	chr6:163645582:C:G	rs6918744	C	G	C	Sox2_MA0143.3	23	0	+	0	0	.
chr6	163661894	163661895	chr6:163661895:G:T	rs12207069	G	T	T	Sox2_MA0143.3	-6	0	+	0	0	.
chr6	163728826	163728827	chr6:163728827:A:C	rs6904842	A	C	A	Sox2_MA0143.3	21	0	+	0	0	.
chr6	163926888	163926889	chr6:163926889:C:T	rs116517547	C	T	C	Sox2_MA0143.3	10	0	+	0	0	.
chr6	164006318	164006319	chr6:164006319:G:A	rs59421749	G	A	A	Sox2_MA0143.3	-15	0	-	0	0	.
chr6	164036252	164036253	chr6:164036253:G:T	rs77261857	G	T	G	Sox2_MA0143.3	19	0	-	0	0	.
chr6	164037233	164037234	chr6:164037234:T:C	rs2070284	T	C	C	Sox2_MA0143.3	12	0	+	0	0	.
chr6	164062155	164062156	chr6:164062156:G:A	rs12204824	G	A	A	Sox2_MA0143.3	-17	0	-	0	0	.
chr6	164208682	164208683	chr6:164208683:G:T	rs1325402	G	T	T	Sox2_MA0143.3	26	0	+	0	0	.
chr6	164213803	164213804	chr6:164213804:C:T	rs55932428	C	T	T	Sox2_MA0143.3	-12	0	+	0	0	.
chr6	164246465	164246466	chr6:164246466:C:A	rs10223688	C	A	C	Sox2_MA0143.3	20	0	+	0	0	.
chr6	164304049	164304050	chr6:164304050:C:T	rs794113	C	T	T	Sox2_MA0143.3	9	0	-	0	0	.
chr6	164396204	164396205	chr6:164396205:G:C	rs12214156	G	C	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr6	164683827	164683828	chr6:164683828:T:C	rs78592360	T	C	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr6	164749915	164749916	chr6:164749916:A:T	rs1012174	A	T	A	Sox2_MA0143.3	-15	0	+	0	0	.
chr6	164860258	164860259	chr6:164860259:C:T	rs4639310	C	T	T	Sox2_MA0143.3	12	0	-	0	0	.
chr6	164913611	164913612	chr6:164913612:A:G	rs6933954	A	G	A	Sox2_MA0143.3	23	0	-	0	0	.
chr6	164998859	164998860	chr6:164998860:G:T	rs35139346	G	T	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr6	165010863	165010864	chr6:165010864:C:T	rs62444002	C	T	C	Sox2_MA0143.3	12	0	-	0	0	.
chr6	165060690	165060691	chr6:165060691:A:G	rs227456	A	G	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr6	165117296	165117297	chr6:165117297:C:T	rs73026767	C	T	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr6	165117315	165117316	chr6:165117316:T:C	rs2758934	T	C	T	Sox2_MA0143.3	3	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr6	165119965	165119966	chr6:165119966:A:G	rs13215765	A	G	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr6	165126348	165126349	chr6:165126349:G:T	rs34837466	G	T	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr6	165146795	165146796	chr6:165146796:T:C	rs192651109	T	C	T	Sox2_MA0143.3	-6	0	+	0	0	.
chr6	165146824	165146825	chr6:165146825:C:G	rs2758941	C	G	G	Sox2_MA0143.3	23	0	+	0	0	.
chr6	165146825	165146826	chr6:165146826:A:G	rs2675730	A	G	G	Sox2_MA0143.3	24	0	+	0	0	.
chr6	165336423	165336424	chr6:165336424:G:A	rs73028216	G	A	G	Sox2_MA0143.3	24	0	-	0	0	.
chr6	165349649	165349650	chr6:165349650:G:A	rs116967772	G	A	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr6	165427122	165427123	chr6:165427123:A:G	rs12211836	A	G	A	Sox2_MA0143.3	7	1	-	9.613475778572903	9.019595766176417	CCATTGTT
chr6	165459965	165459966	chr6:165459966:T:C	rs116773056	T	C	T	Sox2_MA0143.3	2	1	-	9.613475778572903	3.494828071296623	CCATTGTT
chr6	165568522	165568523	chr6:165568523:T:A	rs58263170	T	A	T	Sox2_MA0143.3	6	1	+	9.206767037375712	2.298012258060492	CCTTTGTC
chr6	165605594	165605595	chr6:165605595:A:G	rs12190595	A	G	A	Sox2_MA0143.3	-19	0	+	0	0	.
chr6	165630020	165630021	chr6:165630021:T:C	rs13200957	T	C	T	Sox2_MA0143.3	4	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr6	165656935	165656936	chr6:165656936:C:T	rs911028	C	T	T	Sox2_MA0143.3	22	0	-	0	0	.
chr6	165696423	165696424	chr6:165696424:C:G	rs34906263	C	G	C	Sox2_MA0143.3	7	1	+	9.206767037375712	8.864090315184848	CCTTTGTC
chr6	165775290	165775291	chr6:165775291:A:G	rs11754057	A	G	G	Sox2_MA0143.3	12	0	+	0	0	.
chr6	165830262	165830263	chr6:165830263:G:A	rs80071633	G	A	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr6	165830264	165830265	chr6:165830265:A:T	rs73031975	A	T	A	Sox2_MA0143.3	-15	0	-	0	0	.
chr6	166061398	166061399	chr6:166061399:A:G	rs4458652	A	G	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr6	166102123	166102124	chr6:166102124:A:G	rs3099350	A	G	A	Sox2_MA0143.3	19	0	-	0	0	.
chr6	166236904	166236905	chr6:166236905:T:G	rs6901921	T	G	G	Sox2_MA0143.3	21	0	-	0	0	.
chr6	166254372	166254373	chr6:166254373:T:G	rs4709109	T	G	T	Sox2_MA0143.3	2	1	+	3.5547341015215945	-2.751084876953981	CCTTTGTA
chr6	166276111	166276112	chr6:166276112:C:T	rs9355566	C	T	T	Sox2_MA0143.3	5	1	-	9.613475778572903	2.7047209992576837	CCATTGTT
chr6	166277436	166277437	chr6:166277437:C:T	rs9459629	C	T	C	Sox2_MA0143.3	27	0	+	0	0	.
chr6	166297786	166297787	chr6:166297787:G:C	rs117363081	G	C	G	Sox2_MA0143.3	11	0	-	0	0	.
chr6	166297798	166297799	chr6:166297799:G:A	rs999234	G	A	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr6	166304408	166304409	chr6:166304409:T:C	rs76225745	T	C	T	Sox2_MA0143.3	-5	0	-	0	0	.
chr6	166331905	166331906	chr6:166331906:C:G	rs6927168	C	G	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr6	166373754	166373755	chr6:166373755:C:T	rs4305699	C	T	T	Sox2_MA0143.3	1	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr6	166383842	166383843	chr6:166383843:G:A	rs529792688	G	A	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr6	166402659	166402660	chr6:166402660:T:C	rs12194466	T	C	C	Sox2_MA0143.3	26	0	+	0	0	.
chr6	166424070	166424071	chr6:166424071:G:A	rs56379128	G	A	A	Sox2_MA0143.3	13	0	+	0	0	.
chr6	166439561	166439562	chr6:166439562:C:T	rs12216172	C	T	C	Sox2_MA0143.3	1	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr6	166450975	166450976	chr6:166450976:T:C	rs80186608	T	C	T	Sox2_MA0143.3	-18	0	-	0	0	.
chr6	166507059	166507060	chr6:166507060:G:A	rs79101780	G	A	G	Sox2_MA0143.3	15	0	-	0	0	.
chr6	166507078	166507079	chr6:166507079:C:T	rs2235269	C	T	T	Sox2_MA0143.3	-4	0	-	0	0	.
chr6	166508552	166508553	chr6:166508553:A:G	rs411281	A	G	G	Sox2_MA0143.3	6	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr6	166511182	166511183	chr6:166511183:G:A	rs13195698	G	A	G	Sox2_MA0143.3	-11	0	+	0	0	.
chr6	166527421	166527422	chr6:166527422:T:C	rs3799648	T	C	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr6	166553686	166553687	chr6:166553687:C:T	rs73036826	C	T	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr6	166627975	166627976	chr6:166627976:G:C	rs114166103	G	C	G	Sox2_MA0143.3	1	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr6	166780342	166780343	chr6:166780343:A:G	rs6456124	A	G	G	Sox2_MA0143.3	4	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr6	166798201	166798202	chr6:166798202:T:C	rs13437290	T	C	T	Sox2_MA0143.3	-19	0	-	0	0	.
chr6	166906576	166906577	chr6:166906577:A:C	rs60192750	A	C	A	Sox2_MA0143.3	-6	0	+	0	0	.
chr6	166906582	166906583	chr6:166906583:C:G	rs60913241	C	G	C	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr6	166907838	166907839	chr6:166907839:A:G	rs34078068	A	G	A	Sox2_MA0143.3	13	0	-	0	0	.
chr6	166928284	166928285	chr6:166928285:C:T	rs35614625	C	T	T	Sox2_MA0143.3	-20	0	+	0	0	.
chr6	166928285	166928286	chr6:166928286:G:A	rs9355607	G	A	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr6	166970483	166970484	chr6:166970484:T:C	rs429083	T	C	C	Sox2_MA0143.3	3	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr6	167028135	167028136	chr6:167028136:T:C	rs2181059	T	C	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr6	167079063	167079064	chr6:167079064:A:G	rs7757618	A	G	G	Sox2_MA0143.3	18	0	-	0	0	.
chr6	167102606	167102607	chr6:167102607:C:T	rs10946213	C	T	C	Sox2_MA0143.3	15	0	+	0	0	.
chr6	167135089	167135090	chr6:167135090:A:G	rs3093011	A	G	A	Sox2_MA0143.3	16	0	+	0	0	.
chr6	167156030	167156031	chr6:167156031:C:T	rs6907629	C	T	C	Sox2_MA0143.3	23	0	+	0	0	.
chr6	167157039	167157040	chr6:167157040:C:T	rs35182330	C	T	C	Sox2_MA0143.3	24	0	-	0	0	.
chr6	167198268	167198269	chr6:167198269:T:C	rs9347182	T	C	T	Sox2_MA0143.3	-8	0	+	0	0	.
chr6	167225726	167225727	chr6:167225727:A:T	rs9355619	A	T	T	Sox2_MA0143.3	-14	0	-	0	0	.
chr6	167238385	167238386	chr6:167238386:C:G	rs79898212	C	G	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr6	167241865	167241866	chr6:167241866:G:T	rs182810045	G	T	g	Sox2_MA0143.3	-15	0	+	0	0	.
chr6	167244940	167244941	chr6:167244941:C:T	rs141795548	C	T	-	Sox2_MA0143.3	-9	0	-	0	0	.
chr6	167249755	167249756	chr6:167249756:C:T	rs7749161	C	T	-	Sox2_MA0143.3	16	0	+	0	0	.
chr6	167270914	167270915	chr6:167270915:C:T	rs62437259	C	T	T	Sox2_MA0143.3	24	0	-	0	0	.
chr6	167273082	167273083	chr6:167273083:G:A	rs12527165	G	A	g	Sox2_MA0143.3	24	0	+	0	0	.
chr6	167280273	167280274	chr6:167280274:A:T	rs113547334	A	T	A	Sox2_MA0143.3	-3	0	+	0	0	.
chr6	167365009	167365010	chr6:167365010:T:G	rs12213619	T	G	t	Sox2_MA0143.3	-8	0	-	0	0	.
chr6	167397926	167397927	chr6:167397927:C:G	rs73031243	C	G	c	Sox2_MA0143.3	-20	0	+	0	0	.
chr6	167398935	167398936	chr6:167398936:C:G	rs73031247	C	G	c	Sox2_MA0143.3	-12	0	-	0	0	.
chr6	167412466	167412467	chr6:167412467:G:T	rs62428350	G	T	G	Sox2_MA0143.3	5	1	+	9.206767037375712	2.298012258060492	CCTTTGTC
chr6	167443208	167443209	chr6:167443209:A:G	rs150406269	A	G	A	Sox2_MA0143.3	-2	0	+	0	0	.
chr6	167449766	167449767	chr6:167449767:C:T	rs6921098	C	T	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr6	167479500	167479501	chr6:167479501:G:A	rs140118733	G	A	G	Sox2_MA0143.3	17	0	+	0	0	.
chr6	167496396	167496397	chr6:167496397:G:T	rs139104223	G	T	G	Sox2_MA0143.3	5	1	+	9.613475778572903	2.7047209992576837	CCATTGTT
chr6	167560661	167560662	chr6:167560662:C:T	rs35387950	C	T	c	Sox2_MA0143.3	21	0	-	0	0	.
chr6	167589833	167589834	chr6:167589834:C:T	rs1018672426	C	T	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr6	167679884	167679885	chr6:167679885:T:C	rs111697149	T	C	T	Sox2_MA0143.3	-9	0	+	0	0	.
chr6	167693866	167693867	chr6:167693867:C:T	rs529943055	C	T	c	Sox2_MA0143.3	27	0	-	0	0	.
chr6	167697389	167697390	chr6:167697390:A:C	rs538091	A	C	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr6	167697416	167697417	chr6:167697417:A:T	rs111743016	A	T	A	Sox2_MA0143.3	17	0	+	0	0	.
chr6	167708919	167708920	chr6:167708920:A:G	rs113341558	A	G	A	Sox2_MA0143.3	-5	0	+	0	0	.
chr6	167712167	167712168	chr6:167712168:G:C	rs646935	G	C	G	Sox2_MA0143.3	-11	0	+	0	0	.
chr6	167714527	167714528	chr6:167714528:C:T	rs471703	C	T	T	Sox2_MA0143.3	7	1	-	8.864090315184848	3.5547341015215945	CCTTTGTG
chr6	167752278	167752279	chr6:167752279:G:T	rs644246	G	T	T	Sox2_MA0143.3	5	1	+	9.613475778572903	2.7047209992576837	CCATTGTT
chr6	167795527	167795528	chr6:167795528:C:G	rs2073649	C	G	C	Sox2_MA0143.3	10	0	-	0	0	.
chr6	167795542	167795543	chr6:167795543:C:T	rs645464	C	T	T	Sox2_MA0143.3	-5	0	-	0	0	.
chr6	167812164	167812165	chr6:167812165:C:T	rs588471	C	T	T	Sox2_MA0143.3	0	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr6	167825561	167825562	chr6:167825562:C:T	rs141570306	C	T	C	Sox2_MA0143.3	7	1	-	8.864090315184848	3.5547341015215945	CCTTTGTG
chr6	167832897	167832898	chr6:167832898:C:T	rs145755079	C	T	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr6	167833573	167833574	chr6:167833574:G:A	rs506378	G	A	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr6	167899145	167899146	chr6:167899146:T:C	rs2268947	T	C	T	Sox2_MA0143.3	8	0	+	0	0	.
chr6	167916205	167916206	chr6:167916206:C:T	rs73032782	C	T	T	Sox2_MA0143.3	14	0	+	0	0	.
chr6	167924992	167924993	chr6:167924993:T:C	rs610670	T	C	T	Sox2_MA0143.3	8	0	+	0	0	.
chr6	167935371	167935372	chr6:167935372:G:A	rs3800531	G	A	G	Sox2_MA0143.3	9	0	-	0	0	.
chr6	167935399	167935400	chr6:167935400:G:A	rs3800533	G	A	A	Sox2_MA0143.3	-19	0	-	0	0	.
chr6	167988464	167988465	chr6:167988465:T:C	rs9791274	T	C	T	Sox2_MA0143.3	-7	0	+	0	0	.
chr6	167999279	167999280	chr6:167999280:C:T	rs9455929	C	T	C	Sox2_MA0143.3	9	0	+	0	0	.
chr6	168015927	168015928	chr6:168015928:G:T	rs557127224	G	T	G	Sox2_MA0143.3	7	1	+	8.864090315184848	9.800647049772198	CCTTTGTG
chr6	168053684	168053685	chr6:168053685:T:C	rs3734893	T	C	C	Sox2_MA0143.3	10	0	+	0	0	.
chr6	168053687	168053688	chr6:168053688:A:G	rs3734894	A	G	A	Sox2_MA0143.3	13	0	+	0	0	.
chr6	168085032	168085033	chr6:168085033:A:G	rs6455479	A	G	G	Sox2_MA0143.3	16	0	-	0	0	.
chr6	168085625	168085626	chr6:168085626:G:A	rs10455755	G	A	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr6	168100573	168100574	chr6:168100574:C:A	rs60962212	C	A	C	Sox2_MA0143.3	18	0	-	0	0	.
chr6	168121068	168121069	chr6:168121069:C:T	rs35195071	C	T	T	Sox2_MA0143.3	-2	0	+	0	0	.
chr6	168128007	168128008	chr6:168128008:G:A	rs4708661	G	A	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr6	168133106	168133107	chr6:168133107:A:G	rs746800	A	G	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr6	168133137	168133138	chr6:168133138:C:T	rs117019203	C	T	C	Sox2_MA0143.3	27	0	+	0	0	.
chr6	168145644	168145645	chr6:168145645:T:C	rs1602287	T	C	T	Sox2_MA0143.3	19	0	-	0	0	.
chr6	168149844	168149845	chr6:168149845:A:G	rs6929011	A	G	A	Sox2_MA0143.3	-10	0	+	0	0	.
chr6	168177305	168177306	chr6:168177306:G:C	rs2199774	G	C	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr6	168180907	168180908	chr6:168180908:C:A	rs73270553	C	A	A	Sox2_MA0143.3	-16	0	+	0	0	.
chr6	168300165	168300166	chr6:168300166:G:A	rs12202943	G	A	G	Sox2_MA0143.3	27	0	-	0	0	.
chr6	168319971	168319972	chr6:168319972:G:A	rs12192611	G	A	G	Sox2_MA0143.3	26	0	-	0	0	.
chr6	168320010	168320011	chr6:168320011:T:C	rs3924482	T	C	T	Sox2_MA0143.3	-13	0	-	0	0	.
chr6	168320016	168320017	chr6:168320017:T:G	rs3924483	T	G	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr6	168332153	168332154	chr6:168332154:G:C	rs4708725	G	C	C	Sox2_MA0143.3	14	0	-	0	0	.
chr6	168340788	168340789	chr6:168340789:C:G	rs9456063	C	G	A	Sox2_MA0143.3	23	0	+	0	0	.
chr6	168375485	168375486	chr6:168375486:A:G	rs3892413	A	G	A	Sox2_MA0143.3	-4	0	+	0	0	.
chr6	168375495	168375496	chr6:168375496:T:A	rs76519788	T	A	T	Sox2_MA0143.3	6	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr6	168395620	168395621	chr6:168395621:A:G	rs942552	A	G	G	Sox2_MA0143.3	25	0	-	0	0	.
chr6	168514865	168514866	chr6:168514866:C:T	rs7740366	C	T	C	Sox2_MA0143.3	5	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr6	168524873	168524874	chr6:168524874:C:T	rs117593917	C	T	C	Sox2_MA0143.3	9	0	-	0	0	.
chr6	168585336	168585337	chr6:168585337:G:A	rs9295072	G	A	G	Sox2_MA0143.3	22	0	+	0	0	.
chr6	168616087	168616088	chr6:168616088:T:C	rs34012532	T	C	C	Sox2_MA0143.3	23	0	-	0	0	.
chr6	168617234	168617235	chr6:168617235:C:T	rs4708765	C	T	C	Sox2_MA0143.3	5	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr6	168636674	168636675	chr6:168636675:G:A	rs10945528	G	A	G	Sox2_MA0143.3	0	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr6	168785317	168785318	chr6:168785318:C:T	rs563035087	C	T	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr6	168804620	168804621	chr6:168804621:A:C	rs9294912	A	C	A	Sox2_MA0143.3	17	0	-	0	0	.
chr6	168890845	168890846	chr6:168890846:A:C	rs73043053	A	C	A	Sox2_MA0143.3	-20	0	+	0	0	.
chr6	168890855	168890856	chr6:168890856:G:A	rs6932967	G	A	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr6	168895401	168895402	chr6:168895402:T:G	chr6:168895402:T:G	T	G	T	Sox2_MA0143.3	26	0	+	0	0	.
chr6	168911107	168911108	chr6:168911108:C:T	rs59728910	C	T	C	Sox2_MA0143.3	17	0	-	0	0	.
chr6	168911135	168911136	chr6:168911136:G:A	rs6904785	G	A	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr6	168912801	168912802	chr6:168912802:C:G	rs78199464	C	G	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr6	169009087	169009088	chr6:169009088:T:C	rs9355121	T	C	C	Sox2_MA0143.3	25	0	+	0	0	.
chr6	169069100	169069101	chr6:169069101:C:T	rs2282155	C	T	c	Sox2_MA0143.3	-12	0	+	0	0	.
chr6	169156487	169156488	chr6:169156488:T:G	rs77963101	T	G	T	Sox2_MA0143.3	-20	0	+	0	0	.
chr6	169163069	169163070	chr6:169163070:G:A	rs111725177	G	A	G	Sox2_MA0143.3	18	0	-	0	0	.
chr6	169163078	169163079	chr6:169163079:C:T	rs116933411	C	T	C	Sox2_MA0143.3	9	0	-	0	0	.
chr6	169292268	169292269	chr6:169292269:G:A	rs115428303	G	A	G	Sox2_MA0143.3	-9	0	+	0	0	.
chr6	169383275	169383276	chr6:169383276:C:T	rs2056920	C	T	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr6	169390589	169390590	chr6:169390590:A:T	rs437506	A	T	A	Sox2_MA0143.3	21	0	+	0	0	.
chr6	169393273	169393274	chr6:169393274:G:A	rs2860234	G	A	A	Sox2_MA0143.3	-4	0	+	0	0	.
chr6	169406327	169406328	chr6:169406328:G:A	rs115916467	G	A	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr6	169452382	169452383	chr6:169452383:T:A	rs16888031	T	A	A	Sox2_MA0143.3	-11	0	+	0	0	.
chr6	169577483	169577484	chr6:169577484:C:G	rs9396976	C	G	G	Sox2_MA0143.3	20	0	-	0	0	.
chr6	169636212	169636213	chr6:169636213:A:C	rs7775504	A	C	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr6	169724827	169724828	chr6:169724828:C:G	rs752005010	C	G	C	Sox2_MA0143.3	24	0	+	0	0	.
chr6	169897611	169897612	chr6:169897612:T:C	rs36161290	T	C	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr6	169899374	169899375	chr6:169899375:A:G	rs36186485	A	G	a	Sox2_MA0143.3	-14	0	-	0	0	.
chr6	169921998	169921999	chr6:169921999:C:G	rs36152915	C	G	g	Sox2_MA0143.3	-14	0	+	0	0	.
chr6	169922758	169922759	chr6:169922759:A:C	rs990706518	A	C	a	Sox2_MA0143.3	-4	0	+	0	0	.
chr6	169932694	169932695	chr6:169932695:G:A	rs982998939	G	A	G	Sox2_MA0143.3	16	0	+	0	0	.
chr6	169958413	169958414	chr6:169958414:C:G	rs878860343	C	G	C	Sox2_MA0143.3	25	0	+	0	0	.
chr6	169958415	169958416	chr6:169958416:C:T	rs910078038	C	T	C	Sox2_MA0143.3	27	0	+	0	0	.
chr6	169963639	169963640	chr6:169963640:G:A	rs901252907	G	A	A	Sox2_MA0143.3	14	0	+	0	0	.
chr6	169992527	169992528	chr6:169992528:T:A	rs999504733	T	A	A	Sox2_MA0143.3	-15	0	-	0	0	.
chr6	169994980	169994981	chr6:169994981:C:T	rs1043441878	C	T	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr6	169994985	169994986	chr6:169994986:G:T	rs879246143	G	T	T	Sox2_MA0143.3	-1	0	+	0	0	.
chr6	169994997	169994998	chr6:169994998:G:T	rs879211991	G	T	T	Sox2_MA0143.3	11	0	+	0	0	.
chr6	170027158	170027159	chr6:170027159:A:T	rs9366172	A	T	A	Sox2_MA0143.3	-17	0	-	0	0	.
chr6	170031303	170031304	chr6:170031304:C:T	rs62423397	C	T	C	Sox2_MA0143.3	0	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr6	170031310	170031311	chr6:170031311:G:A	rs57013687	G	A	G	Sox2_MA0143.3	7	1	+	8.864090315184848	3.5547341015215945	CCTTTGTG
chr6	170036249	170036250	chr6:170036250:A:T	rs9366132	A	T	T	Sox2_MA0143.3	-5	0	+	0	0	.
chr6	170036882	170036883	chr6:170036883:C:T	rs111465238	C	T	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr6	170093123	170093124	chr6:170093124:G:A	rs28693416	G	A	A	Sox2_MA0143.3	21	0	-	0	0	.
chr6	170096555	170096556	chr6:170096556:C:T	rs758102301	C	T	T	Sox2_MA0143.3	-3	0	-	0	0	.
chr6	170097592	170097593	chr6:170097593:A:G	rs541962933	A	G	A	Sox2_MA0143.3	6	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr6	170097603	170097604	chr6:170097604:G:A	rs9356676	G	A	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr6	170124787	170124788	chr6:170124788:G:A	rs3012451	G	A	A	Sox2_MA0143.3	16	0	-	0	0	.
chr6	170126170	170126171	chr6:170126171:G:A	rs1738	G	A	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr6	170132144	170132145	chr6:170132145:T:A	rs2935067	T	A	T	Sox2_MA0143.3	-19	0	-	0	0	.
chr6	170152667	170152668	chr6:170152668:A:C	chr6:170152668:A:C	A	C	A	Sox2_MA0143.3	26	0	+	0	0	.
chr6	170153840	170153841	chr6:170153841:A:C	rs3012385	A	C	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr6	170207790	170207791	chr6:170207791:C:T	rs1049470057	C	T	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr6	170253209	170253210	chr6:170253210:G:A	rs367781335	G	A	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr6	170283823	170283824	chr6:170283824:G:A	rs144456629	G	A	G	Sox2_MA0143.3	23	0	+	0	0	.
chr6	170296653	170296654	chr6:170296654:G:T	rs148919258	G	T	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr6	170297449	170297450	chr6:170297450:G:A	rs112828030	G	A	G	Sox2_MA0143.3	14	0	+	0	0	.
chr6	170345174	170345175	chr6:170345175:C:T	rs16901337	C	T	C	Sox2_MA0143.3	13	0	+	0	0	.
chr6	170345183	170345184	chr6:170345184:C:G	rs75247088	C	G	C	Sox2_MA0143.3	22	0	+	0	0	.
chr6	170404918	170404919	chr6:170404919:T:C	rs1274	T	C	C	Sox2_MA0143.3	4	1	+	8.676919043985553	1.7681642646703322	CCATTGTG
chr6	170425879	170425880	chr6:170425880:C:T	rs2294185	C	T	T	Sox2_MA0143.3	-17	0	-	0	0	.
chr6	170444860	170444861	chr6:170444861:C:T	rs9460179	C	T	c	Sox2_MA0143.3	-19	0	+	0	0	.
chr6	170444871	170444872	chr6:170444872:G:A	rs909478	G	A	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr6	170493086	170493087	chr6:170493087:A:C	rs12201276	A	C	c	Sox2_MA0143.3	17	0	+	0	0	.
chr7	35372	35373	chr7:35373:C:T	rs1338883119	C	T	c	Sox2_MA0143.3	-17	0	-	0	0	.
chr7	56619	56620	chr7:56620:G:C	rs62429417	G	C	g	Sox2_MA0143.3	-3	0	+	0	0	.
chr7	59639	59640	chr7:59640:G:T	rs73672839	G	T	N	Sox2_MA0143.3	-19	0	-	0	0	.
chr7	89719	89720	chr7:89720:A:T	rs145875481	A	T	a	Sox2_MA0143.3	-3	0	+	0	0	.
chr7	89733	89734	chr7:89734:A:G	rs4916925	A	G	N	Sox2_MA0143.3	11	0	+	0	0	.
chr7	94630	94631	chr7:94631:T:C	rs4436074	T	C	N	Sox2_MA0143.3	18	0	-	0	0	.
chr7	94666	94667	chr7:94667:A:G	rs9656581	A	G	a	Sox2_MA0143.3	-18	0	-	0	0	.
chr7	95279	95280	chr7:95280:A:C	rs11772933	A	C	N	Sox2_MA0143.3	18	0	-	0	0	.
chr7	102050	102051	chr7:102051:G:A	rs76465149	G	A	g	Sox2_MA0143.3	15	0	-	0	0	.
chr7	105355	105356	chr7:105356:G:C	rs61063898	G	C	N	Sox2_MA0143.3	10	0	-	0	0	.
chr7	106300	106301	chr7:106301:T:C	rs62430613	T	C	N	Sox2_MA0143.3	2	1	-	9.613475778572903	3.494828071296623	CCATTGTT
chr7	130198	130199	chr7:130199:A:G	rs3935270	A	G	A	Sox2_MA0143.3	-9	0	-	0	0	.
chr7	183024	183025	chr7:183025:C:G	rs28497001	C	G	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr7	193978	193979	chr7:193979:C:T	rs186449019	C	T	C	Sox2_MA0143.3	19	0	+	0	0	.
chr7	198639	198640	chr7:198640:G:A	rs4244221	G	A	G	Sox2_MA0143.3	11	0	+	0	0	.
chr7	200083	200084	chr7:200084:C:T	rs933651161	C	T	C	Sox2_MA0143.3	5	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr7	213089	213090	chr7:213090:G:A	rs35745428	G	A	-	Sox2_MA0143.3	16	0	+	0	0	.
chr7	213753	213754	chr7:213754:C:T	rs62430295	C	T	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr7	219996	219997	chr7:219997:G:C	rs28473402	G	C	C	Sox2_MA0143.3	16	0	+	0	0	.
chr7	233266	233267	chr7:233267:G:C	rs1029487937	G	C	G	Sox2_MA0143.3	27	0	+	0	0	.
chr7	246695	246696	chr7:246696:T:C	rs149204984	T	C	-	Sox2_MA0143.3	4	1	+	9.206767037375712	2.2980122580604916	CCTTTGTC
chr7	270561	270562	chr7:270562:G:A	rs36153103	G	A	g	Sox2_MA0143.3	-18	0	+	0	0	.
chr7	284798	284799	chr7:284799:C:T	rs182240238	C	T	c	Sox2_MA0143.3	-19	0	+	0	0	.
chr7	284833	284834	chr7:284834:T:C	rs36142869	T	C	c	Sox2_MA0143.3	16	0	+	0	0	.
chr7	307328	307329	chr7:307329:C:G	rs140647401	C	G	g	Sox2_MA0143.3	15	0	-	0	0	.
chr7	307332	307333	chr7:307333:T:C	rs150469532	T	C	c	Sox2_MA0143.3	11	0	-	0	0	.
chr7	325138	325139	chr7:325139:G:A	rs138212369	G	A	G	Sox2_MA0143.3	24	0	+	0	0	.
chr7	333661	333662	chr7:333662:C:T	chr7:333662:C:T	C	T	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr7	357987	357988	chr7:357988:G:C	rs36161223	G	C	c	Sox2_MA0143.3	-10	0	-	0	0	.
chr7	359228	359229	chr7:359229:C:T	rs36183805	C	T	c	Sox2_MA0143.3	-18	0	+	0	0	.
chr7	374964	374965	chr7:374965:C:T	rs140894797	C	T	c	Sox2_MA0143.3	-4	0	-	0	0	.
chr7	410825	410826	chr7:410826:T:C	rs144228447	T	C	t	Sox2_MA0143.3	-11	0	+	0	0	.
chr7	453402	453403	chr7:453403:C:G	rs145383401	C	G	T	Sox2_MA0143.3	-11	0	+	0	0	.
chr7	467167	467168	chr7:467168:C:G	rs148046195	C	G	C	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr7	557952	557953	chr7:557953:G:A	rs149540140	G	A	-	Sox2_MA0143.3	27	0	-	0	0	.
chr7	578086	578087	chr7:578087:G:A	rs146468292	G	A	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr7	601887	601888	chr7:601888:G:T	rs554781971	G	T	G	Sox2_MA0143.3	21	0	+	0	0	.
chr7	685633	685634	chr7:685634:T:G	rs62432182	T	G	G	Sox2_MA0143.3	13	0	-	0	0	.
chr7	685655	685656	chr7:685656:T:C	rs74367433	T	C	T	Sox2_MA0143.3	-9	0	-	0	0	.
chr7	741049	741050	chr7:741050:T:C	rs62432212	T	C	C	Sox2_MA0143.3	4	1	+	9.206767037375712	2.2980122580604916	CCTTTGTC
chr7	826831	826832	chr7:826832:G:C	rs6973278	G	C	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr7	830864	830865	chr7:830865:G:A	rs565938725	G	A	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr7	830875	830876	chr7:830876:C:A	rs76537194	C	A	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr7	831664	831665	chr7:831665:G:A	rs10215572	G	A	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr7	873615	873616	chr7:873616:T:C	rs142734717	T	C	T	Sox2_MA0143.3	14	0	-	0	0	.
chr7	876248	876249	chr7:876249:C:A	rs987904555	C	A	C	Sox2_MA0143.3	26	0	+	0	0	.
chr7	889485	889486	chr7:889486:C:T	rs4719730	C	T	C	Sox2_MA0143.3	15	0	-	0	0	.
chr7	922849	922850	chr7:922850:C:T	rs187063315	C	T	N	Sox2_MA0143.3	-20	0	+	0	0	.
chr7	922856	922857	chr7:922857:G:A	rs191078567	G	A	N	Sox2_MA0143.3	-13	0	+	0	0	.
chr7	950010	950011	chr7:950011:G:A	rs73044453	G	A	g	Sox2_MA0143.3	11	0	-	0	0	.
chr7	967332	967333	chr7:967333:C:A	rs116884794	C	A	t	Sox2_MA0143.3	8	0	+	0	0	.
chr7	1000152	1000153	chr7:1000153:C:T	rs112068599	C	T	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr7	1053071	1053072	chr7:1053072:G:C	rs376420446	G	C	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr7	1082212	1082213	chr7:1082213:A:G	rs12701969	A	G	a	Sox2_MA0143.3	17	0	+	0	0	.
chr7	1115017	1115018	chr7:1115018:G:A	rs78145050	G	A	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr7	1124092	1124093	chr7:1124093:A:G	rs55828745	A	G	A	Sox2_MA0143.3	7	1	-	9.800647049772198	9.206767037375712	CCTTTGTT
chr7	1125399	1125400	chr7:1125400:A:G	rs10239011	A	G	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr7	1130821	1130822	chr7:1130822:C:T	rs62431989	C	T	C	Sox2_MA0143.3	24	0	-	0	0	.
chr7	1155578	1155579	chr7:1155579:A:C	rs1133116	A	C	A	Sox2_MA0143.3	21	0	-	0	0	.
chr7	1224541	1224542	chr7:1224542:G:T	rs781161910	G	T	G	Sox2_MA0143.3	0	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr7	1242430	1242431	chr7:1242431:C:A	rs117138641	C	A	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr7	1256520	1256521	chr7:1256521:G:T	rs6962227	G	T	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr7	1278948	1278949	chr7:1278949:C:A	rs13233053	C	A	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr7	1278954	1278955	chr7:1278955:G:T	rs13222319	G	T	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr7	1297577	1297578	chr7:1297578:G:C	rs560727645	G	C	G	Sox2_MA0143.3	5	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr7	1298585	1298586	chr7:1298586:C:T	rs4724909	C	T	T	Sox2_MA0143.3	9	0	-	0	0	.
chr7	1298588	1298589	chr7:1298589:A:G	rs6956174	A	G	A	Sox2_MA0143.3	6	1	-	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr7	1404032	1404033	chr7:1404033:C:T	rs73038811	C	T	C	Sox2_MA0143.3	15	0	+	0	0	.
chr7	1404037	1404038	chr7:1404038:T:C	rs1026295355	T	C	T	Sox2_MA0143.3	20	0	+	0	0	.
chr7	1429253	1429254	chr7:1429254:C:A	rs182140727	C	A	C	Sox2_MA0143.3	14	0	-	0	0	.
chr7	1429254	1429255	chr7:1429255:G:C	rs186742978	G	C	G	Sox2_MA0143.3	13	0	-	0	0	.
chr7	1435162	1435163	chr7:1435163:A:G	rs67046940	A	G	G	Sox2_MA0143.3	19	0	-	0	0	.
chr7	1455771	1455772	chr7:1455772:G:C	rs561833129	G	C	G	Sox2_MA0143.3	19	0	-	0	0	.
chr7	1520523	1520524	chr7:1520524:A:G	rs1434336	A	G	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr7	1523317	1523318	chr7:1523318:G:A	rs73283864	G	A	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr7	1539637	1539638	chr7:1539638:G:A	rs892522	G	A	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr7	1591584	1591585	chr7:1591585:G:A	chr7:1591585:G:A	G	A	G	Sox2_MA0143.3	21	0	-	0	0	.
chr7	1591590	1591591	chr7:1591591:T:C	rs2077421	T	C	C	Sox2_MA0143.3	15	0	-	0	0	.
chr7	1622488	1622489	chr7:1622489:A:G	rs62436945	A	G	G	Sox2_MA0143.3	23	0	-	0	0	.
chr7	1645373	1645374	chr7:1645374:T:C	rs7785046	T	C	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr7	1695969	1695970	chr7:1695970:C:A	rs10215242	C	A	A	Sox2_MA0143.3	-14	0	+	0	0	.
chr7	1706896	1706897	chr7:1706897:G:A	rs145571288	G	A	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr7	1741557	1741558	chr7:1741558:T:C	rs73278908	T	C	T	Sox2_MA0143.3	11	0	-	0	0	.
chr7	1751380	1751381	chr7:1751381:A:G	rs2398718	A	G	A	Sox2_MA0143.3	2	1	-	3.5547341015215945	-2.751084876953981	CCTTTGTA
chr7	1751391	1751392	chr7:1751392:C:G	rs75962580	C	G	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr7	1766954	1766955	chr7:1766955:A:T	rs12535951	A	T	T	Sox2_MA0143.3	17	0	+	0	0	.
chr7	1839532	1839533	chr7:1839533:C:T	rs148969722	C	T	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr7	1854798	1854799	chr7:1854799:C:T	rs10230847	C	T	C	Sox2_MA0143.3	14	0	-	0	0	.
chr7	1854829	1854830	chr7:1854830:G:A	rs191380691	G	A	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr7	1919492	1919493	chr7:1919493:G:A	rs191271396	G	A	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr7	1943143	1943144	chr7:1943144:C:T	rs7792631	C	T	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr7	1993477	1993478	chr7:1993478:G:A	rs61115016	G	A	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr7	2103154	2103155	chr7:2103155:C:G	rs143734793	C	G	C	Sox2_MA0143.3	24	0	-	0	0	.
chr7	2138147	2138148	chr7:2138148:C:A	rs17132239	C	A	C	Sox2_MA0143.3	11	0	-	0	0	.
chr7	2169927	2169928	chr7:2169928:T:C	rs1637762	T	C	t	Sox2_MA0143.3	-16	0	-	0	0	.
chr7	2299272	2299273	chr7:2299273:G:C	rs190145246	G	C	G	Sox2_MA0143.3	10	0	-	0	0	.
chr7	2388001	2388002	chr7:2388002:G:A	rs12534239	G	A	G	Sox2_MA0143.3	-3	0	+	0	0	.
chr7	2396550	2396551	chr7:2396551:G:A	rs1476614	G	A	G	Sox2_MA0143.3	11	0	+	0	0	.
chr7	2400055	2400056	chr7:2400056:G:A	rs147304872	G	A	A	Sox2_MA0143.3	-6	0	+	0	0	.
chr7	2458294	2458295	chr7:2458295:C:T	rs76071584	C	T	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr7	2509476	2509477	chr7:2509477:T:C	rs286554	T	C	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr7	2572119	2572120	chr7:2572120:T:C	rs147958520	T	C	T	Sox2_MA0143.3	-20	0	+	0	0	.
chr7	2601262	2601263	chr7:2601263:T:C	rs2969057	T	C	T	Sox2_MA0143.3	17	0	-	0	0	.
chr7	2617435	2617436	chr7:2617436:G:A	rs115262078	G	A	G	Sox2_MA0143.3	17	0	-	0	0	.
chr7	2623408	2623409	chr7:2623409:G:A	rs57680893	G	A	G	Sox2_MA0143.3	24	0	-	0	0	.
chr7	2626916	2626917	chr7:2626917:A:T	rs117814416	A	T	.	Sox2_MA0143.3	-10	0	+	0	0	.
chr7	2706762	2706763	chr7:2706763:G:A	rs117682734	G	A	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr7	2717995	2717996	chr7:2717996:C:G	rs71527405	C	G	C	Sox2_MA0143.3	18	0	-	0	0	.
chr7	2763402	2763403	chr7:2763403:A:G	rs798486	A	G	A	Sox2_MA0143.3	3	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr7	2795234	2795235	chr7:2795235:C:T	rs2533886	C	T	C	Sox2_MA0143.3	12	0	+	0	0	.
chr7	2856488	2856489	chr7:2856489:T:C	rs11770710	T	C	T	Sox2_MA0143.3	-13	0	+	0	0	.
chr7	2924151	2924152	chr7:2924152:C:T	rs150887589	C	T	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr7	2953302	2953303	chr7:2953303:A:C	rs527788279	A	C	A	Sox2_MA0143.3	6	1	-	9.613475778572903	2.7047209992576837	CCATTGTT
chr7	2967747	2967748	chr7:2967748:T:C	rs7782108	T	C	C	Sox2_MA0143.3	23	0	+	0	0	.
chr7	2993667	2993668	chr7:2993668:A:C	rs936904	A	C	C	Sox2_MA0143.3	4	1	-	8.864090315184848	1.9553355358696274	CCTTTGTG
chr7	2993668	2993669	chr7:2993669:A:G	rs936903	A	G	A	Sox2_MA0143.3	3	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr7	3113538	3113539	chr7:3113539:G:A	rs9986945	G	A	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr7	3169265	3169266	chr7:3169266:C:T	rs74819480	C	T	c	Sox2_MA0143.3	-19	0	-	0	0	.
chr7	3203668	3203669	chr7:3203669:A:G	rs115229986	A	G	A	Sox2_MA0143.3	-1	0	-	0	0	.
chr7	3203682	3203683	chr7:3203683:G:A	rs7782087	G	A	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr7	3231279	3231280	chr7:3231280:T:G	rs73041590	T	G	T	Sox2_MA0143.3	-8	0	+	0	0	.
chr7	3350380	3350381	chr7:3350381:G:A	rs7776559	G	A	A	Sox2_MA0143.3	-5	0	+	0	0	.
chr7	3487052	3487053	chr7:3487053:C:T	rs1548210	C	T	T	Sox2_MA0143.3	-2	0	+	0	0	.
chr7	3537518	3537519	chr7:3537519:C:T	rs34360159	C	T	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr7	3713242	3713243	chr7:3713243:G:A	rs6462250	G	A	A	Sox2_MA0143.3	18	0	+	0	0	.
chr7	3713248	3713249	chr7:3713249:T:C	rs142220819	T	C	T	Sox2_MA0143.3	24	0	+	0	0	.
chr7	3755407	3755408	chr7:3755408:A:G	rs142983697	A	G	A	Sox2_MA0143.3	-11	0	+	0	0	.
chr7	3980408	3980409	chr7:3980409:T:C	rs186628316	T	C	T	Sox2_MA0143.3	3	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr7	3980427	3980428	chr7:3980428:C:G	rs114129214	C	G	C	Sox2_MA0143.3	22	0	+	0	0	.
chr7	4033968	4033969	chr7:4033969:C:T	rs10237319	C	T	T	Sox2_MA0143.3	-9	0	-	0	0	.
chr7	4074419	4074420	chr7:4074420:G:T	rs114047320	G	T	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr7	4102894	4102895	chr7:4102895:G:A	rs78900045	G	A	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr7	4111281	4111282	chr7:4111282:T:C	rs6970287	T	C	C	Sox2_MA0143.3	10	0	-	0	0	.
chr7	4112279	4112280	chr7:4112280:A:G	rs73046433	A	G	A	Sox2_MA0143.3	-6	0	-	0	0	.
chr7	4164375	4164376	chr7:4164376:A:G	rs657323	A	G	A	Sox2_MA0143.3	-20	0	-	0	0	.
chr7	4179009	4179010	chr7:4179010:G:A	rs57522904	G	A	A	Sox2_MA0143.3	-12	0	+	0	0	.
chr7	4182456	4182457	chr7:4182457:T:G	rs10265031	T	G	T	Sox2_MA0143.3	25	0	+	0	0	.
chr7	4201066	4201067	chr7:4201067:G:A	rs1105697	G	A	G	Sox2_MA0143.3	-2	0	+	0	0	.
chr7	4207430	4207431	chr7:4207431:G:A	rs75967417	G	A	G	Sox2_MA0143.3	15	0	+	0	0	.
chr7	4209048	4209049	chr7:4209049:T:C	rs17134615	T	C	C	Sox2_MA0143.3	22	0	-	0	0	.
chr7	4238063	4238064	chr7:4238064:C:T	rs117939179	C	T	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr7	4245920	4245921	chr7:4245921:G:A	rs116722524	G	A	G	Sox2_MA0143.3	15	0	-	0	0	.
chr7	4367609	4367610	chr7:4367610:A:G	rs4236350	A	G	A	Sox2_MA0143.3	-3	0	-	0	0	.
chr7	4416190	4416191	chr7:4416191:T:C	rs149264227	T	C	T	Sox2_MA0143.3	-6	0	+	0	0	.
chr7	4416862	4416863	chr7:4416863:T:C	rs980757761	T	C	T	Sox2_MA0143.3	-15	0	+	0	0	.
chr7	4416904	4416905	chr7:4416905:T:C	rs7801128	T	C	T	Sox2_MA0143.3	27	0	+	0	0	.
chr7	4437380	4437381	chr7:4437381:T:C	rs314583	T	C	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr7	4437392	4437393	chr7:4437393:C:A	rs314582	C	A	C	Sox2_MA0143.3	0	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr7	4477459	4477460	chr7:4477460:G:A	rs34764478	G	A	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr7	4530368	4530369	chr7:4530369:G:C	rs2343293	G	C	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr7	4532329	4532330	chr7:4532330:C:A	rs4301351	C	A	c	Sox2_MA0143.3	-4	0	-	0	0	.
chr7	4560156	4560157	chr7:4560157:C:G	rs28594461	C	G	C	Sox2_MA0143.3	27	0	+	0	0	.
chr7	4561975	4561976	chr7:4561976:T:A	rs10240592	T	A	A	Sox2_MA0143.3	-2	0	+	0	0	.
chr7	4562050	4562051	chr7:4562051:A:C	rs10237521	A	C	C	Sox2_MA0143.3	16	0	+	0	0	.
chr7	4562058	4562059	chr7:4562059:G:A	rs12164082	G	A	G	Sox2_MA0143.3	24	0	+	0	0	.
chr7	4562145	4562146	chr7:4562146:C:T	rs10951610	C	T	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr7	4604415	4604416	chr7:4604416:A:G	rs183039436	A	G	A	Sox2_MA0143.3	2	1	+	9.613475778572903	3.494828071296623	CCATTGTT
chr7	4650901	4650902	chr7:4650902:C:T	rs17135009	C	T	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr7	4713201	4713202	chr7:4713202:A:C	rs56025211	A	C	A	Sox2_MA0143.3	-3	0	+	0	0	.
chr7	4818345	4818346	chr7:4818346:G:A	rs76083556	G	A	G	Sox2_MA0143.3	7	1	-	9.019595766176417	9.613475778572903	CCATTGTC
chr7	4823045	4823046	chr7:4823046:G:A	rs7800598	G	A	G	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr7	4879094	4879095	chr7:4879095:G:A	rs4724134	G	A	A	Sox2_MA0143.3	13	0	-	0	0	.
chr7	4939627	4939628	chr7:4939628:T:C	rs73322952	T	C	t	Sox2_MA0143.3	-10	0	-	0	0	.
chr7	5039543	5039544	chr7:5039544:G:A	rs56144815	G	A	g	Sox2_MA0143.3	-9	0	+	0	0	.
chr7	5110402	5110403	chr7:5110403:C:T	rs59927964	C	T	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr7	5141917	5141918	chr7:5141918:G:A	rs73057825	G	A	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr7	5147784	5147785	chr7:5147785:G:A	rs7805568	G	A	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr7	5170292	5170293	chr7:5170293:A:T	rs73322854	A	T	A	Sox2_MA0143.3	10	0	-	0	0	.
chr7	5171371	5171372	chr7:5171372:G:A	rs13233208	G	A	G	Sox2_MA0143.3	22	0	+	0	0	.
chr7	5177129	5177130	chr7:5177130:A:G	rs75963905	A	G	A	Sox2_MA0143.3	2	1	+	9.019595766176417	2.900948058900136	CCATTGTC
chr7	5219050	5219051	chr7:5219051:T:G	rs75881577	T	G	T	Sox2_MA0143.3	4	1	+	9.800647049772198	2.8918922704569785	CCTTTGTT
chr7	5240577	5240578	chr7:5240578:A:G	chr7:5240578:A:G	A	G	A	Sox2_MA0143.3	-8	0	-	0	0	.
chr7	5240581	5240582	chr7:5240582:T:C	chr7:5240582:T:C	T	C	T	Sox2_MA0143.3	-12	0	-	0	0	.
chr7	5274409	5274410	chr7:5274410:A:G	rs114485323	A	G	A	Sox2_MA0143.3	-9	0	-	0	0	.
chr7	5295208	5295209	chr7:5295209:C:G	rs11771019	C	G	C	Sox2_MA0143.3	27	0	+	0	0	.
chr7	5362974	5362975	chr7:5362975:G:A	rs4357206	G	A	G	Sox2_MA0143.3	15	0	+	0	0	.
chr7	5426262	5426263	chr7:5426263:G:C	rs149190079	G	C	G	Sox2_MA0143.3	12	0	-	0	0	.
chr7	5438231	5438232	chr7:5438232:A:G	rs183594476	A	G	A	Sox2_MA0143.3	17	0	+	0	0	.
chr7	5438235	5438236	chr7:5438236:A:G	rs76112679	A	G	A	Sox2_MA0143.3	21	0	+	0	0	.
chr7	5529778	5529779	chr7:5529779:A:G	rs763859167	A	G	A	Sox2_MA0143.3	2	1	-	9.206767037375712	2.900948058900136	CCTTTGTC
chr7	5574963	5574964	chr7:5574964:C:A	rs139816210	C	A	c	Sox2_MA0143.3	10	0	-	0	0	.
chr7	5594417	5594418	chr7:5594418:C:T	rs565204252	C	T	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr7	5594425	5594426	chr7:5594426:A:T	rs556170204	A	T	A	Sox2_MA0143.3	-9	0	+	0	0	.
chr7	5596502	5596503	chr7:5596503:C:A	rs375845324	C	A	C	Sox2_MA0143.3	12	0	+	0	0	.
chr7	5680286	5680287	chr7:5680287:C:T	rs77480997	C	T	C	Sox2_MA0143.3	11	0	+	0	0	.
chr7	5779959	5779960	chr7:5779960:C:T	rs73048736	C	T	.	Sox2_MA0143.3	17	0	-	0	0	.
chr7	5781343	5781344	chr7:5781344:A:T	rs1002238674	A	T	.	Sox2_MA0143.3	27	0	+	0	0	.
chr7	5987356	5987357	chr7:5987357:G:A	rs1805321	G	A	.	Sox2_MA0143.3	-11	0	+	0	0	.
chr7	6051215	6051216	chr7:6051216:C:T	chr7:6051216:C:T	C	T	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr7	6349140	6349141	chr7:6349141:A:G	chr7:6349141:A:G	A	G	A	Sox2_MA0143.3	6	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr7	6351414	6351415	chr7:6351415:G:A	rs34208673	G	A	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr7	6359146	6359147	chr7:6359147:T:G	chr7:6359147:T:G	T	G	T	Sox2_MA0143.3	21	0	+	0	0	.
chr7	6396047	6396048	chr7:6396048:T:C	chr7:6396048:T:C	T	C	T	Sox2_MA0143.3	16	0	-	0	0	.
chr7	6396079	6396080	chr7:6396080:G:T	rs549179858	G	T	G	Sox2_MA0143.3	-16	0	-	0	0	.
chr7	6447443	6447444	chr7:6447444:G:T	rs80031670	G	T	G	Sox2_MA0143.3	27	0	-	0	0	.
chr7	6447469	6447470	chr7:6447470:G:A	rs6945450	G	A	G	Sox2_MA0143.3	1	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr7	6447482	6447483	chr7:6447483:C:T	rs115672443	C	T	C	Sox2_MA0143.3	-12	0	-	0	0	.
chr7	6463790	6463791	chr7:6463791:T:A	rs73342979	T	A	T	Sox2_MA0143.3	-15	0	-	0	0	.
chr7	6737324	6737325	chr7:6737325:A:G	rs7804542	A	G	G	Sox2_MA0143.3	3	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr7	6935302	6935303	chr7:6935303:A:G	rs4260806	A	G	.	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr7	6999514	6999515	chr7:6999515:C:T	rs4311584	C	T	.	Sox2_MA0143.3	25	0	+	0	0	.
chr7	7062306	7062307	chr7:7062307:T:A	rs77906399	T	A	T	Sox2_MA0143.3	-9	0	-	0	0	.
chr7	7182246	7182247	chr7:7182247:G:A	rs114307654	G	A	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr7	7204367	7204368	chr7:7204368:G:T	rs34705126	G	T	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr7	7208058	7208059	chr7:7208059:T:C	rs79125604	T	C	T	Sox2_MA0143.3	-20	0	+	0	0	.
chr7	7208073	7208074	chr7:7208074:T:A	rs75869684	T	A	T	Sox2_MA0143.3	-5	0	+	0	0	.
chr7	7212870	7212871	chr7:7212871:G:A	rs111252221	G	A	G	Sox2_MA0143.3	-3	0	-	0	0	.
chr7	7237583	7237584	chr7:7237584:C:G	rs11771259	C	G	C	Sox2_MA0143.3	1	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr7	7255170	7255171	chr7:7255171:A:C	rs17165674	A	C	a	Sox2_MA0143.3	8	0	-	0	0	.
chr7	7268056	7268057	chr7:7268057:G:C	rs58287611	G	C	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr7	7303476	7303477	chr7:7303477:A:T	rs6969213	A	T	A	Sox2_MA0143.3	18	0	+	0	0	.
chr7	7303479	7303480	chr7:7303480:G:A	rs2079983	G	A	G	Sox2_MA0143.3	21	0	+	0	0	.
chr7	7408299	7408300	chr7:7408300:C:T	rs13438584	C	T	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr7	7444087	7444088	chr7:7444088:T:A	rs28454801	T	A	A	Sox2_MA0143.3	-13	0	-	0	0	.
chr7	7461837	7461838	chr7:7461838:A:G	rs55841745	A	G	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr7	7484272	7484273	chr7:7484273:T:G	rs77228513	T	G	T	Sox2_MA0143.3	16	0	-	0	0	.
chr7	7564444	7564445	chr7:7564445:C:G	rs17168704	C	G	G	Sox2_MA0143.3	8	0	-	0	0	.
chr7	7567731	7567732	chr7:7567732:C:A	rs10249840	C	A	A	Sox2_MA0143.3	0	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr7	7737187	7737188	chr7:7737188:T:A	rs35844437	T	A	A	Sox2_MA0143.3	19	0	+	0	0	.
chr7	7739862	7739863	chr7:7739863:A:G	rs144636346	A	G	A	Sox2_MA0143.3	25	0	-	0	0	.
chr7	7762552	7762553	chr7:7762553:T:C	rs1417138672	T	C	T	Sox2_MA0143.3	26	0	-	0	0	.
chr7	7772187	7772188	chr7:7772188:C:G	rs35023386	C	G	G	Sox2_MA0143.3	1	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr7	7791342	7791343	chr7:7791343:A:T	rs11760601	A	T	A	Sox2_MA0143.3	23	0	+	0	0	.
chr7	7903075	7903076	chr7:7903076:T:C	rs60887581	T	C	T	Sox2_MA0143.3	-14	0	-	0	0	.
chr7	7920210	7920211	chr7:7920211:C:G	rs10263240	C	G	C	Sox2_MA0143.3	17	0	+	0	0	.
chr7	7931682	7931683	chr7:7931683:G:A	rs76345535	G	A	G	Sox2_MA0143.3	20	0	-	0	0	.
chr7	7963135	7963136	chr7:7963136:T:G	rs929510	T	G	T	Sox2_MA0143.3	6	1	+	9.206767037375712	2.298012258060492	CCTTTGTC
chr7	7968653	7968654	chr7:7968654:G:A	rs535517040	G	A	G	Sox2_MA0143.3	18	0	+	0	0	.
chr7	8111338	8111339	chr7:8111339:G:A	rs73674807	G	A	G	Sox2_MA0143.3	-5	0	+	0	0	.
chr7	8111359	8111360	chr7:8111360:A:G	rs13227590	A	G	G	Sox2_MA0143.3	16	0	+	0	0	.
chr7	8119326	8119327	chr7:8119327:T:C	rs17330033	T	C	T	Sox2_MA0143.3	-18	0	-	0	0	.
chr7	8143535	8143536	chr7:8143536:T:C	rs760546076	T	C	T	Sox2_MA0143.3	-7	0	-	0	0	.
chr7	8161055	8161056	chr7:8161056:A:G	rs6942541	A	G	G	Sox2_MA0143.3	4	1	-	3.5547341015215945	-3.3540206777936254	CCTTTGTA
chr7	8198180	8198181	chr7:8198181:C:A	rs10952094	C	A	C	Sox2_MA0143.3	25	0	+	0	0	.
chr7	8202897	8202898	chr7:8202898:G:A	rs12671374	G	A	G	Sox2_MA0143.3	-5	0	+	0	0	.
chr7	8260570	8260571	chr7:8260571:T:C	rs3823816	T	C	T	Sox2_MA0143.3	2	1	+	3.5547341015215945	-2.751084876953981	CCTTTGTA
chr7	8291135	8291136	chr7:8291136:C:T	rs188300889	C	T	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr7	8291149	8291150	chr7:8291150:G:A	rs4725078	G	A	A	Sox2_MA0143.3	-5	0	+	0	0	.
chr7	8386907	8386908	chr7:8386908:A:G	rs10259079	A	G	a	Sox2_MA0143.3	-15	0	+	0	0	.
chr7	8507082	8507083	chr7:8507083:G:C	rs78792847	G	C	G	Sox2_MA0143.3	7	1	-	9.019595766176417	8.676919043985553	CCATTGTC
chr7	8509846	8509847	chr7:8509847:C:T	rs2057865	C	T	T	Sox2_MA0143.3	25	0	+	0	0	.
chr7	8565963	8565964	chr7:8565964:G:A	rs946265194	G	A	G	Sox2_MA0143.3	9	0	+	0	0	.
chr7	8748612	8748613	chr7:8748613:A:G	rs2349780	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr7	9018127	9018128	chr7:9018128:A:G	rs74686382	A	G	A	Sox2_MA0143.3	23	0	-	0	0	.
chr7	9063717	9063718	chr7:9063718:G:A	rs34699421	G	A	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr7	9169687	9169688	chr7:9169688:A:C	rs444085	A	C	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr7	9240030	9240031	chr7:9240031:A:G	rs1406628	A	G	A	Sox2_MA0143.3	-6	0	-	0	0	.
chr7	9470561	9470562	chr7:9470562:T:G	rs2262730	T	G	G	Sox2_MA0143.3	4	1	+	8.676919043985553	1.7681642646703322	CCATTGTG
chr7	9796435	9796436	chr7:9796436:A:C	rs1306019745	A	C	A	Sox2_MA0143.3	2	1	+	8.676919043985553	2.5582713367092715	CCATTGTG
chr7	9946062	9946063	chr7:9946063:G:A	rs73677243	G	A	G	Sox2_MA0143.3	25	0	-	0	0	.
chr7	10247693	10247694	chr7:10247694:A:G	rs2214710	A	G	G	Sox2_MA0143.3	6	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr7	10247716	10247717	chr7:10247717:A:C	rs2189937	A	C	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr7	10308550	10308551	chr7:10308551:G:A	rs16876545	G	A	A	Sox2_MA0143.3	-20	0	+	0	0	.
chr7	10308595	10308596	chr7:10308596:T:G	rs13244651	T	G	T	Sox2_MA0143.3	25	0	+	0	0	.
chr7	10311801	10311802	chr7:10311802:A:G	rs17531609	A	G	A	Sox2_MA0143.3	25	0	-	0	0	.
chr7	10649023	10649024	chr7:10649024:T:C	rs7811030	T	C	T	Sox2_MA0143.3	-3	0	-	0	0	.
chr7	10797517	10797518	chr7:10797518:A:G	rs184573353	A	G	A	Sox2_MA0143.3	17	0	-	0	0	.
chr7	10874893	10874894	chr7:10874894:C:G	rs2882978	C	G	G	Sox2_MA0143.3	5	1	-	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr7	10888638	10888639	chr7:10888639:T:G	rs7357204	T	G	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr7	10977062	10977063	chr7:10977063:C:G	rs1640701	C	G	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr7	11182793	11182794	chr7:11182794:A:G	rs7458410	A	G	A	Sox2_MA0143.3	4	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr7	11212971	11212972	chr7:11212972:G:A	rs12155005	G	A	G	Sox2_MA0143.3	0	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr7	11329854	11329855	chr7:11329855:A:G	rs916908	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr7	11341245	11341246	chr7:11341246:C:T	rs16876818	C	T	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr7	11341246	11341247	chr7:11341247:G:A	rs17544875	G	A	A	Sox2_MA0143.3	-19	0	+	0	0	.
chr7	11346090	11346091	chr7:11346091:T:G	rs75639514	T	G	T	Sox2_MA0143.3	-16	0	+	0	0	.
chr7	11347232	11347233	chr7:11347233:G:A	rs7796596	G	A	G	Sox2_MA0143.3	12	0	-	0	0	.
chr7	11546137	11546138	chr7:11546138:C:T	rs62432857	C	T	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr7	11870318	11870319	chr7:11870319:C:T	rs2355119	C	T	T	Sox2_MA0143.3	-13	0	-	0	0	.
chr7	11874563	11874564	chr7:11874564:G:A	rs28534975	G	A	A	Sox2_MA0143.3	21	0	+	0	0	.
chr7	11912269	11912270	chr7:11912270:C:A	rs17165372	C	A	C	Sox2_MA0143.3	5	1	-	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr7	12066429	12066430	chr7:12066430:C:T	rs7801745	C	T	T	Sox2_MA0143.3	-11	0	+	0	0	.
chr7	12083264	12083265	chr7:12083265:G:T	rs7789227	G	T	T	Sox2_MA0143.3	23	0	-	0	0	.
chr7	12107939	12107940	chr7:12107940:A:G	rs11760500	A	G	G	Sox2_MA0143.3	7	1	+	3.5547341015215945	8.864090315184848	CCTTTGTA
chr7	12328316	12328317	chr7:12328317:T:G	rs10155958	T	G	T	Sox2_MA0143.3	4	1	+	9.800647049772198	2.8918922704569785	CCTTTGTT
chr7	12370006	12370007	chr7:12370007:G:C	rs78090033	G	C	G	Sox2_MA0143.3	21	0	-	0	0	.
chr7	12389349	12389350	chr7:12389350:A:G	rs1050924874	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr7	12433971	12433972	chr7:12433972:G:C	rs57682619	G	C	C	Sox2_MA0143.3	23	0	+	0	0	.
chr7	12481451	12481452	chr7:12481452:C:T	rs6976425	C	T	T	Sox2_MA0143.3	-4	0	-	0	0	.
chr7	12497054	12497055	chr7:12497055:A:G	rs1992308	A	G	A	Sox2_MA0143.3	2	1	+	8.676919043985553	2.5582713367092715	CCATTGTG
chr7	12525241	12525242	chr7:12525242:G:C	rs10452766	G	C	G	Sox2_MA0143.3	19	0	+	0	0	.
chr7	12590132	12590133	chr7:12590133:G:T	rs1138910	G	T	G	Sox2_MA0143.3	25	0	+	0	0	.
chr7	12639106	12639107	chr7:12639107:C:T	rs17166252	C	T	C	Sox2_MA0143.3	1	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr7	12731201	12731202	chr7:12731202:C:A	rs6460976	C	A	C	Sox2_MA0143.3	10	0	+	0	0	.
chr7	12828057	12828058	chr7:12828058:T:C	rs10269634	T	C	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr7	12944015	12944016	chr7:12944016:T:C	rs969389422	T	C	T	Sox2_MA0143.3	8	0	+	0	0	.
chr7	13017473	13017474	chr7:13017474:G:A	rs10950428	G	A	A	Sox2_MA0143.3	-3	0	-	0	0	.
chr7	13021582	13021583	chr7:13021583:G:A	rs73261911	G	A	A	Sox2_MA0143.3	17	0	-	0	0	.
chr7	13028174	13028175	chr7:13028175:A:G	rs113878495	A	G	A	Sox2_MA0143.3	-7	0	+	0	0	.
chr7	13028200	13028201	chr7:13028201:C:A	rs145567167	C	A	C	Sox2_MA0143.3	19	0	+	0	0	.
chr7	13356986	13356987	chr7:13356987:A:G	rs1469636	A	G	G	Sox2_MA0143.3	16	0	-	0	0	.
chr7	13526707	13526708	chr7:13526708:A:G	rs2692470	A	G	A	Sox2_MA0143.3	3	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr7	13531559	13531560	chr7:13531560:C:T	rs11978669	C	T	T	Sox2_MA0143.3	-6	0	-	0	0	.
chr7	13538714	13538715	chr7:13538715:A:C	rs9639158	A	C	A	Sox2_MA0143.3	11	0	-	0	0	.
chr7	13552141	13552142	chr7:13552142:C:T	rs17280283	C	T	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr7	13703265	13703266	chr7:13703266:A:G	rs11979693	A	G	A	Sox2_MA0143.3	3	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr7	13830423	13830424	chr7:13830424:T:C	rs10234662	T	C	T	Sox2_MA0143.3	-14	0	-	0	0	.
chr7	13846744	13846745	chr7:13846745:G:T	rs77329865	G	T	G	Sox2_MA0143.3	0	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr7	13991459	13991460	chr7:13991460:T:C	rs567579751	T	C	T	Sox2_MA0143.3	17	0	+	0	0	.
chr7	14310073	14310074	chr7:14310074:G:A	rs10231874	G	A	G	Sox2_MA0143.3	27	0	-	0	0	.
chr7	14793280	14793281	chr7:14793281:G:A	rs17168437	G	A	G	Sox2_MA0143.3	12	0	-	0	0	.
chr7	15015764	15015765	chr7:15015765:A:T	rs145654889	A	T	A	Sox2_MA0143.3	-16	0	-	0	0	.
chr7	15087000	15087001	chr7:15087001:T:G	rs6951081	T	G	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr7	15087276	15087277	chr7:15087277:A:T	rs10227486	A	T	T	Sox2_MA0143.3	20	0	-	0	0	.
chr7	15186243	15186244	chr7:15186244:A:T	rs55884692	A	T	A	Sox2_MA0143.3	-1	0	-	0	0	.
chr7	15237319	15237320	chr7:15237320:A:G	rs4428566	A	G	A	Sox2_MA0143.3	17	0	-	0	0	.
chr7	15245949	15245950	chr7:15245950:C:A	rs61113173	C	A	A	Sox2_MA0143.3	9	0	+	0	0	.
chr7	15277805	15277806	chr7:15277806:C:T	rs73060448	C	T	C	Sox2_MA0143.3	11	0	+	0	0	.
chr7	15342349	15342350	chr7:15342350:C:T	rs6967336	C	T	T	Sox2_MA0143.3	-19	0	-	0	0	.
chr7	15361172	15361173	chr7:15361173:G:C	rs34519644	G	C	G	Sox2_MA0143.3	0	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr7	15376921	15376922	chr7:15376922:G:A	rs4385372	G	A	G	Sox2_MA0143.3	8	0	+	0	0	.
chr7	15376938	15376939	chr7:15376939:C:T	rs4551231	C	T	T	Sox2_MA0143.3	25	0	+	0	0	.
chr7	15765777	15765778	chr7:15765778:G:T	rs17169067	G	T	G	Sox2_MA0143.3	-11	0	+	0	0	.
chr7	16130112	16130113	chr7:16130113:G:C	rs7787646	G	C	G	Sox2_MA0143.3	27	0	+	0	0	.
chr7	16166108	16166109	chr7:16166109:G:A	rs75292975	G	A	G	Sox2_MA0143.3	27	0	+	0	0	.
chr7	16167052	16167053	chr7:16167053:C:T	rs13227822	C	T	C	Sox2_MA0143.3	22	0	+	0	0	.
chr7	16169801	16169802	chr7:16169802:C:T	rs1527206	C	T	C	Sox2_MA0143.3	26	0	-	0	0	.
chr7	16187468	16187469	chr7:16187469:G:A	rs4721478	G	A	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr7	16266333	16266334	chr7:16266334:A:G	rs1295141	A	G	C	Sox2_MA0143.3	13	0	+	0	0	.
chr7	16409998	16409999	chr7:16409999:T:C	rs183425203	T	C	T	Sox2_MA0143.3	26	0	-	0	0	.
chr7	16460265	16460266	chr7:16460266:G:A	rs12699796	G	A	G	Sox2_MA0143.3	5	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr7	16472235	16472236	chr7:16472236:T:C	rs6461257	T	C	t	Sox2_MA0143.3	-20	0	-	0	0	.
chr7	16484829	16484830	chr7:16484830:T:C	rs6952900	T	C	T	Sox2_MA0143.3	-14	0	-	0	0	.
chr7	16491315	16491316	chr7:16491316:C:T	rs28731310	C	T	T	Sox2_MA0143.3	15	0	-	0	0	.
chr7	16515271	16515272	chr7:16515272:A:G	rs11761392	A	G	A	Sox2_MA0143.3	8	0	-	0	0	.
chr7	16600098	16600099	chr7:16600099:C:G	rs17169555	C	G	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr7	16602123	16602124	chr7:16602124:A:C	rs523615	A	C	C	Sox2_MA0143.3	18	0	+	0	0	.
chr7	16607106	16607107	chr7:16607107:G:A	rs7788389	G	A	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr7	16620177	16620178	chr7:16620178:T:C	rs2286228	T	C	T	Sox2_MA0143.3	19	0	-	0	0	.
chr7	16646171	16646172	chr7:16646172:C:T	rs530485993	C	T	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr7	16646181	16646182	chr7:16646182:C:G	rs138675668	C	G	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr7	16646204	16646205	chr7:16646205:G:A	rs906647984	G	A	G	Sox2_MA0143.3	18	0	+	0	0	.
chr7	16657810	16657811	chr7:16657811:C:T	rs150139071	C	T	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr7	16657812	16657813	chr7:16657813:C:A	rs11972166	C	A	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr7	16678335	16678336	chr7:16678336:C:T	rs863669	C	T	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr7	16745896	16745897	chr7:16745897:A:C	rs1674801	A	C	A	Sox2_MA0143.3	23	0	-	0	0	.
chr7	16779173	16779174	chr7:16779174:A:G	rs6461276	A	G	A	Sox2_MA0143.3	6	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr7	16785427	16785428	chr7:16785428:T:C	rs1202775863	T	C	T	Sox2_MA0143.3	24	0	-	0	0	.
chr7	16822610	16822611	chr7:16822611:G:T	rs7797977	G	T	G	Sox2_MA0143.3	-3	0	+	0	0	.
chr7	16851541	16851542	chr7:16851542:A:G	rs6959216	A	G	G	Sox2_MA0143.3	21	0	+	0	0	.
chr7	16908982	16908983	chr7:16908983:T:A	rs9638737	T	A	T	Sox2_MA0143.3	-1	0	+	0	0	.
chr7	16951940	16951941	chr7:16951941:T:C	rs1721038	T	C	T	Sox2_MA0143.3	18	0	-	0	0	.
chr7	16986923	16986924	chr7:16986924:A:G	rs79471868	A	G	A	Sox2_MA0143.3	-16	0	-	0	0	.
chr7	17020352	17020353	chr7:17020353:G:A	rs13308391	G	A	A	Sox2_MA0143.3	26	0	-	0	0	.
chr7	17185321	17185322	chr7:17185322:T:A	rs2389752	T	A	T	Sox2_MA0143.3	-6	0	+	0	0	.
chr7	17186836	17186837	chr7:17186837:T:C	rs79060196	T	C	T	Sox2_MA0143.3	-12	0	+	0	0	.
chr7	17186859	17186860	chr7:17186860:C:T	rs10950650	C	T	C	Sox2_MA0143.3	11	0	+	0	0	.
chr7	17221577	17221578	chr7:17221578:A:G	rs10273347	A	G	a	Sox2_MA0143.3	-19	0	-	0	0	.
chr7	17239768	17239769	chr7:17239769:C:T	rs78707595	C	T	C	Sox2_MA0143.3	1	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr7	17420494	17420495	chr7:17420495:C:G	rs6943636	C	G	C	Sox2_MA0143.3	25	0	+	0	0	.
chr7	17466261	17466262	chr7:17466262:T:C	rs4721612	T	C	T	Sox2_MA0143.3	-8	0	+	0	0	.
chr7	17582948	17582949	chr7:17582949:A:T	rs117446440	A	T	A	Sox2_MA0143.3	14	0	+	0	0	.
chr7	17646194	17646195	chr7:17646195:C:T	rs11982921	C	T	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr7	17661919	17661920	chr7:17661920:A:G	chr7:17661920:A:G	A	G	A	Sox2_MA0143.3	-8	0	+	0	0	.
chr7	17661924	17661925	chr7:17661925:C:T	rs142448242	C	T	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr7	17687955	17687956	chr7:17687956:G:A	rs12535608	G	A	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr7	17690583	17690584	chr7:17690584:C:T	rs2537606	C	T	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr7	17774426	17774427	chr7:17774427:G:A	rs2537592	G	A	A	Sox2_MA0143.3	-20	0	+	0	0	.
chr7	17774460	17774461	chr7:17774461:A:T	rs1404418	A	T	A	Sox2_MA0143.3	14	0	+	0	0	.
chr7	17774461	17774462	chr7:17774462:G:C	rs577191406	G	C	G	Sox2_MA0143.3	15	0	+	0	0	.
chr7	17786864	17786865	chr7:17786865:C:T	rs72508212	C	T	c	Sox2_MA0143.3	-3	0	-	0	0	.
chr7	18053169	18053170	chr7:18053170:A:G	rs77327408	A	G	A	Sox2_MA0143.3	3	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr7	18224885	18224886	chr7:18224886:C:T	rs73681731	C	T	C	Sox2_MA0143.3	7	1	+	9.206767037375712	9.800647049772198	CCTTTGTC
chr7	18389223	18389224	chr7:18389224:A:T	rs4719534	A	T	A	Sox2_MA0143.3	26	0	+	0	0	.
chr7	18509092	18509093	chr7:18509093:T:G	rs112435533	T	G	T	Sox2_MA0143.3	25	0	-	0	0	.
chr7	18509095	18509096	chr7:18509096:G:A	rs2520460	G	A	G	Sox2_MA0143.3	22	0	-	0	0	.
chr7	18553122	18553123	chr7:18553123:C:T	rs75332598	C	T	T	Sox2_MA0143.3	23	0	+	0	0	.
chr7	18826580	18826581	chr7:18826581:A:C	rs892617581	A	C	A	Sox2_MA0143.3	-8	0	-	0	0	.
chr7	19105702	19105703	chr7:19105703:T:C	rs73325511	T	C	t	Sox2_MA0143.3	-4	0	+	0	0	.
chr7	19105716	19105717	chr7:19105717:A:G	rs73325513	A	G	a	Sox2_MA0143.3	10	0	+	0	0	.
chr7	19181793	19181794	chr7:19181794:C:T	rs76016942	C	T	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr7	19187503	19187504	chr7:19187504:C:T	rs113657969	C	T	c	Sox2_MA0143.3	-17	0	-	0	0	.
chr7	19240138	19240139	chr7:19240139:T:C	rs11980417	T	C	t	Sox2_MA0143.3	24	0	+	0	0	.
chr7	19246426	19246427	chr7:19246427:A:T	rs7797118	A	T	T	Sox2_MA0143.3	8	0	+	0	0	.
chr7	19353322	19353323	chr7:19353323:A:C	rs73684878	A	C	A	Sox2_MA0143.3	22	0	+	0	0	.
chr7	19509282	19509283	chr7:19509283:T:A	rs4721779	T	A	T	Sox2_MA0143.3	25	0	+	0	0	.
chr7	19509284	19509285	chr7:19509285:T:G	rs4721780	T	G	T	Sox2_MA0143.3	27	0	+	0	0	.
chr7	19681784	19681785	chr7:19681785:A:T	rs721875	A	T	T	Sox2_MA0143.3	22	0	+	0	0	.
chr7	19749951	19749952	chr7:19749952:C:G	rs561800717	C	G	C	Sox2_MA0143.3	12	0	-	0	0	.
chr7	20103244	20103245	chr7:20103245:C:T	rs12536790	C	T	C	Sox2_MA0143.3	0	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr7	20103266	20103267	chr7:20103267:G:A	rs10259621	G	A	A	Sox2_MA0143.3	22	0	+	0	0	.
chr7	20141919	20141920	chr7:20141920:T:C	rs58183259	T	C	T	Sox2_MA0143.3	-19	0	-	0	0	.
chr7	20145061	20145062	chr7:20145062:A:G	rs75429227	A	G	A	Sox2_MA0143.3	15	0	-	0	0	.
chr7	20157829	20157830	chr7:20157830:C:T	rs973071	C	T	T	Sox2_MA0143.3	10	0	-	0	0	.
chr7	20307946	20307947	chr7:20307947:A:G	rs3114431	A	G	A	Sox2_MA0143.3	17	0	+	0	0	.
chr7	20333791	20333792	chr7:20333792:T:A	rs11982847	T	A	T	Sox2_MA0143.3	-18	0	-	0	0	.
chr7	20353028	20353029	chr7:20353029:T:C	rs3807936	T	C	T	Sox2_MA0143.3	17	0	-	0	0	.
chr7	20441957	20441958	chr7:20441958:G:A	rs1968052	G	A	A	Sox2_MA0143.3	20	0	+	0	0	.
chr7	20448017	20448018	chr7:20448018:T:G	rs11761661	T	G	T	Sox2_MA0143.3	-8	0	-	0	0	.
chr7	20476458	20476459	chr7:20476459:G:T	rs17142945	G	T	G	Sox2_MA0143.3	0	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr7	20491143	20491144	chr7:20491144:G:T	rs10226404	G	T	-	Sox2_MA0143.3	9	0	+	0	0	.
chr7	20512081	20512082	chr7:20512082:G:A	rs1012870	G	A	A	Sox2_MA0143.3	16	0	+	0	0	.
chr7	20526167	20526168	chr7:20526168:A:G	rs76532830	A	G	A	Sox2_MA0143.3	21	0	+	0	0	.
chr7	20607162	20607163	chr7:20607163:C:G	rs17143180	C	G	G	Sox2_MA0143.3	25	0	-	0	0	.
chr7	20700008	20700009	chr7:20700009:A:C	rs11762180	A	C	A	Sox2_MA0143.3	13	0	-	0	0	.
chr7	20717251	20717252	chr7:20717252:A:G	rs10259493	A	G	A	Sox2_MA0143.3	-4	0	-	0	0	.
chr7	20778231	20778232	chr7:20778232:C:A	rs544926341	C	A	c	Sox2_MA0143.3	10	0	+	0	0	.
chr7	20843649	20843650	chr7:20843650:T:C	rs6960772	T	C	T	Sox2_MA0143.3	2	1	-	9.613475778572903	3.494828071296623	CCATTGTT
chr7	20871144	20871145	chr7:20871145:T:G	rs118033212	T	G	T	Sox2_MA0143.3	-20	0	-	0	0	.
chr7	21043284	21043285	chr7:21043285:G:C	rs6461532	G	C	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr7	21096908	21096909	chr7:21096909:G:T	rs12700253	G	T	T	Sox2_MA0143.3	-12	0	-	0	0	.
chr7	21261699	21261700	chr7:21261700:C:G	rs75053523	C	G	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr7	21307852	21307853	chr7:21307853:T:C	rs1613562	T	C	C	Sox2_MA0143.3	24	0	-	0	0	.
chr7	21357829	21357830	chr7:21357830:T:G	rs6974533	T	G	G	Sox2_MA0143.3	6	1	+	9.019595766176417	2.110840986861197	CCATTGTC
chr7	21365324	21365325	chr7:21365325:C:T	rs11514744	C	T	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr7	21370871	21370872	chr7:21370872:T:G	rs4722017	T	G	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr7	21426538	21426539	chr7:21426539:T:C	rs2073535	T	C	T	Sox2_MA0143.3	-3	0	-	0	0	.
chr7	21480513	21480514	chr7:21480514:G:A	rs10272006	G	A	A	Sox2_MA0143.3	-20	0	+	0	0	.
chr7	21508654	21508655	chr7:21508655:A:C	rs557162044	A	C	A	Sox2_MA0143.3	-15	0	+	0	0	.
chr7	21551076	21551077	chr7:21551077:C:T	rs6461579	C	T	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr7	21656393	21656394	chr7:21656394:T:A	rs13244343	T	A	T	Sox2_MA0143.3	-12	0	+	0	0	.
chr7	21764598	21764599	chr7:21764599:G:T	chr7:21764599:G:T	G	T	G	Sox2_MA0143.3	11	0	+	0	0	.
chr7	21764606	21764607	chr7:21764607:C:T	rs12700303	C	T	T	Sox2_MA0143.3	19	0	+	0	0	.
chr7	21868372	21868373	chr7:21868373:G:A	rs757132	G	A	G	Sox2_MA0143.3	13	0	+	0	0	.
chr7	21868378	21868379	chr7:21868379:C:G	rs76527551	C	G	C	Sox2_MA0143.3	19	0	+	0	0	.
chr7	22093919	22093920	chr7:22093920:G:C	rs57191357	G	C	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr7	22110385	22110386	chr7:22110386:T:C	rs907274842	T	C	T	Sox2_MA0143.3	6	1	+	8.676919043985553	1.7681642646703326	CCATTGTG
chr7	22110398	22110399	chr7:22110399:A:C	rs141544114	A	C	A	Sox2_MA0143.3	19	0	+	0	0	.
chr7	22123420	22123421	chr7:22123421:T:C	rs4722100	T	C	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr7	22156464	22156465	chr7:22156465:A:G	rs76194881	A	G	G	Sox2_MA0143.3	6	1	-	9.019595766176417	2.110840986861197	CCATTGTC
chr7	22251473	22251474	chr7:22251474:A:C	rs6967302	A	C	C	Sox2_MA0143.3	22	0	-	0	0	.
chr7	22295858	22295859	chr7:22295859:G:C	rs78238116	G	C	G	Sox2_MA0143.3	0	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr7	22411726	22411727	chr7:22411727:G:T	rs4719692	G	T	T	Sox2_MA0143.3	-4	0	+	0	0	.
chr7	22442939	22442940	chr7:22442940:C:A	rs79752786	C	A	C	Sox2_MA0143.3	18	0	+	0	0	.
chr7	22442942	22442943	chr7:22442943:C:T	rs118022177	C	T	C	Sox2_MA0143.3	21	0	+	0	0	.
chr7	22445031	22445032	chr7:22445032:G:A	rs11974838	G	A	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr7	22454331	22454332	chr7:22454332:G:C	rs12536301	G	C	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr7	22482558	22482559	chr7:22482559:C:A	rs17364835	C	A	C	Sox2_MA0143.3	8	0	-	0	0	.
chr7	22496881	22496882	chr7:22496882:A:T	rs12539559	A	T	T	Sox2_MA0143.3	-9	0	-	0	0	.
chr7	22681323	22681324	chr7:22681324:G:C	rs2067074	G	C	G	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr7	22836696	22836697	chr7:22836697:C:T	rs9654968	C	T	C	Sox2_MA0143.3	12	0	+	0	0	.
chr7	22867193	22867194	chr7:22867194:G:A	rs12538567	G	A	G	Sox2_MA0143.3	15	0	+	0	0	.
chr7	23018864	23018865	chr7:23018865:T:G	rs1489653137	T	G	T	Sox2_MA0143.3	20	0	-	0	0	.
chr7	23136032	23136033	chr7:23136033:C:G	chr7:23136033:C:G	C	G	C	Sox2_MA0143.3	0	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr7	23287699	23287700	chr7:23287700:G:A	rs73277894	G	A	A	Sox2_MA0143.3	-17	0	-	0	0	.
chr7	23345638	23345639	chr7:23345639:G:A	rs274051	G	A	G	Sox2_MA0143.3	7	1	-	9.019595766176417	9.613475778572903	CCATTGTC
chr7	23410457	23410458	chr7:23410458:T:C	rs12700437	T	C	T	Sox2_MA0143.3	-4	0	-	0	0	.
chr7	23432441	23432442	chr7:23432442:T:C	rs12700439	T	C	T	Sox2_MA0143.3	-10	0	+	0	0	.
chr7	23467897	23467898	chr7:23467898:G:C	chr7:23467898:G:C	G	C	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr7	23467899	23467900	chr7:23467900:C:T	rs4496867	C	T	c	Sox2_MA0143.3	-7	0	-	0	0	.
chr7	23598282	23598283	chr7:23598283:A:T	rs71526018	A	T	A	Sox2_MA0143.3	-4	0	+	0	0	.
chr7	23795074	23795075	chr7:23795075:G:T	rs62470070	G	T	G	Sox2_MA0143.3	12	0	-	0	0	.
chr7	23860509	23860510	chr7:23860510:T:C	rs7799453	T	C	C	Sox2_MA0143.3	2	1	-	8.676919043985553	2.5582713367092715	CCATTGTG
chr7	24120549	24120550	chr7:24120550:C:T	rs17360344	C	T	C	Sox2_MA0143.3	19	0	-	0	0	.
chr7	24142556	24142557	chr7:24142557:G:A	rs198703	G	A	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr7	24334651	24334652	chr7:24334652:G:A	rs4719765	G	A	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr7	24403804	24403805	chr7:24403805:G:T	rs10247614	G	T	G	Sox2_MA0143.3	25	0	+	0	0	.
chr7	24422700	24422701	chr7:24422701:G:A	rs1858957	G	A	G	Sox2_MA0143.3	21	0	+	0	0	.
chr7	24426164	24426165	chr7:24426165:C:A	rs6942803	C	A	A	Sox2_MA0143.3	16	0	-	0	0	.
chr7	24443657	24443658	chr7:24443658:G:C	rs62448898	G	C	G	Sox2_MA0143.3	10	0	-	0	0	.
chr7	24702508	24702509	chr7:24702509:G:A	rs2721819	G	A	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr7	24781325	24781326	chr7:24781326:G:C	rs74779340	G	C	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr7	24794450	24794451	chr7:24794451:A:G	rs142263011	A	G	A	Sox2_MA0143.3	8	0	+	0	0	.
chr7	24817528	24817529	chr7:24817529:C:T	rs1859118	C	T	C	Sox2_MA0143.3	12	0	-	0	0	.
chr7	24817529	24817530	chr7:24817530:G:A	rs75684908	G	A	G	Sox2_MA0143.3	11	0	-	0	0	.
chr7	24843438	24843439	chr7:24843439:C:T	rs7802083	C	T	C	Sox2_MA0143.3	-12	0	-	0	0	.
chr7	24908679	24908680	chr7:24908680:G:A	rs75350439	G	A	G	Sox2_MA0143.3	11	0	-	0	0	.
chr7	24916862	24916863	chr7:24916863:T:C	rs10235913	T	C	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr7	24930403	24930404	chr7:24930404:G:A	rs62448671	G	A	G	Sox2_MA0143.3	1	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr7	24980732	24980733	chr7:24980733:G:A	rs1226597368	G	A	G	Sox2_MA0143.3	-16	0	-	0	0	.
chr7	24986243	24986244	chr7:24986244:C:T	rs1544376	C	T	C	Sox2_MA0143.3	16	0	+	0	0	.
chr7	25033501	25033502	chr7:25033502:C:A	rs73278367	C	A	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr7	25085008	25085009	chr7:25085009:C:T	rs12531950	C	T	.	Sox2_MA0143.3	-14	0	+	0	0	.
chr7	25246378	25246379	chr7:25246379:T:G	rs6960988	T	G	G	Sox2_MA0143.3	4	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr7	25246385	25246386	chr7:25246386:A:T	rs10435093	A	T	A	Sox2_MA0143.3	11	0	+	0	0	.
chr7	25249882	25249883	chr7:25249883:T:C	rs2107126	T	C	T	Sox2_MA0143.3	11	0	-	0	0	.
chr7	25391429	25391430	chr7:25391430:A:G	rs148429484	A	G	A	Sox2_MA0143.3	22	0	+	0	0	.
chr7	25408158	25408159	chr7:25408159:A:G	rs115714365	A	G	A	Sox2_MA0143.3	22	0	-	0	0	.
chr7	25408501	25408502	chr7:25408502:C:T	rs73691593	C	T	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr7	25410025	25410026	chr7:25410026:A:G	rs59244939	A	G	A	Sox2_MA0143.3	-4	0	-	0	0	.
chr7	25477483	25477484	chr7:25477484:A:G	rs17317920	A	G	G	Sox2_MA0143.3	13	0	-	0	0	.
chr7	25562610	25562611	chr7:25562611:T:C	rs7780911	T	C	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr7	25625313	25625314	chr7:25625314:A:G	rs372371313	A	G	A	Sox2_MA0143.3	-14	0	+	0	0	.
chr7	25712814	25712815	chr7:25712815:C:T	chr7:25712815:C:T	C	T	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr7	25726702	25726703	chr7:25726703:A:G	rs77038552	A	G	A	Sox2_MA0143.3	-14	0	+	0	0	.
chr7	25759961	25759962	chr7:25759962:G:T	rs1859853	G	T	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr7	25824412	25824413	chr7:25824413:T:C	rs61140461	T	C	C	Sox2_MA0143.3	12	0	-	0	0	.
chr7	25847657	25847658	chr7:25847658:G:A	rs2290263	G	A	A	Sox2_MA0143.3	-7	0	+	0	0	.
chr7	25847974	25847975	chr7:25847975:A:G	rs752226685	A	G	A	Sox2_MA0143.3	3	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr7	25889845	25889846	chr7:25889846:G:A	rs28411031	G	A	G	Sox2_MA0143.3	-3	0	+	0	0	.
chr7	25994978	25994979	chr7:25994979:T:G	rs2893234	T	G	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr7	26009859	26009860	chr7:26009860:G:A	rs6968895	G	A	A	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr7	26079082	26079083	chr7:26079083:G:A	rs143498781	G	A	G	Sox2_MA0143.3	24	0	-	0	0	.
chr7	26079119	26079120	chr7:26079120:A:T	rs184222336	A	T	A	Sox2_MA0143.3	-13	0	-	0	0	.
chr7	26168102	26168103	chr7:26168103:C:T	rs57693267	C	T	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr7	26168134	26168135	chr7:26168135:C:A	rs11767587	C	A	C	Sox2_MA0143.3	18	0	+	0	0	.
chr7	26304380	26304381	chr7:26304381:C:A	rs34822078	C	A	C	Sox2_MA0143.3	24	0	+	0	0	.
chr7	26349546	26349547	chr7:26349547:C:A	rs6946449	C	A	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr7	26398894	26398895	chr7:26398895:C:T	rs142419294	C	T	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr7	26507623	26507624	chr7:26507624:C:T	rs6945310	C	T	T	Sox2_MA0143.3	21	0	-	0	0	.
chr7	26546951	26546952	chr7:26546952:C:T	rs757805	C	T	T	Sox2_MA0143.3	14	0	-	0	0	.
chr7	26623407	26623408	chr7:26623408:C:T	rs6962850	C	T	T	Sox2_MA0143.3	24	0	-	0	0	.
chr7	26647797	26647798	chr7:26647798:T:C	rs2391305	T	C	C	Sox2_MA0143.3	6	1	+	9.019595766176417	2.110840986861197	CCATTGTC
chr7	26655387	26655388	chr7:26655388:T:A	rs192216608	T	A	T	Sox2_MA0143.3	19	0	+	0	0	.
chr7	26657881	26657882	chr7:26657882:T:G	rs12672000	T	G	T	Sox2_MA0143.3	19	0	+	0	0	.
chr7	26667516	26667517	chr7:26667517:A:G	rs10244449	A	G	A	Sox2_MA0143.3	23	0	-	0	0	.
chr7	26854503	26854504	chr7:26854504:T:G	rs6461980	T	G	T	Sox2_MA0143.3	8	0	+	0	0	.
chr7	26861348	26861349	chr7:26861349:C:T	rs79569630	C	T	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr7	26991979	26991980	chr7:26991980:C:T	rs118188233	C	T	C	Sox2_MA0143.3	27	0	-	0	0	.
chr7	27028871	27028872	chr7:27028872:C:G	rs2522822	C	G	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr7	27071735	27071736	chr7:27071736:C:G	rs2712240	C	G	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr7	27098563	27098564	chr7:27098564:C:T	rs6668	C	T	C	Sox2_MA0143.3	18	0	-	0	0	.
chr7	27148242	27148243	chr7:27148243:G:T	rs73290311	G	T	G	Sox2_MA0143.3	1	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr7	27149473	27149474	chr7:27149474:A:G	rs114461936	A	G	A	Sox2_MA0143.3	17	0	-	0	0	.
chr7	27157981	27157982	chr7:27157982:C:G	rs4722666	C	G	C	Sox2_MA0143.3	26	0	-	0	0	.
chr7	27251846	27251847	chr7:27251847:G:T	rs73683734	G	T	G	Sox2_MA0143.3	17	0	+	0	0	.
chr7	27433736	27433737	chr7:27433737:A:G	rs62454789	A	G	A	Sox2_MA0143.3	-2	0	-	0	0	.
chr7	27435093	27435094	chr7:27435094:A:G	rs969410	A	G	A	Sox2_MA0143.3	22	0	-	0	0	.
chr7	27469973	27469974	chr7:27469974:A:G	rs9639549	A	G	A	Sox2_MA0143.3	14	0	+	0	0	.
chr7	27516294	27516295	chr7:27516295:A:G	rs10951169	A	G	A	Sox2_MA0143.3	-18	0	+	0	0	.
chr7	27617961	27617962	chr7:27617962:C:T	rs753766804	C	T	C	Sox2_MA0143.3	27	0	-	0	0	.
chr7	27918237	27918238	chr7:27918238:C:A	rs1989909	C	A	c	Sox2_MA0143.3	-20	0	-	0	0	.
chr7	27955227	27955228	chr7:27955228:T:C	rs1557780	T	C	T	Sox2_MA0143.3	-10	0	+	0	0	.
chr7	28019353	28019354	chr7:28019354:G:C	rs10273628	G	C	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr7	28025078	28025079	chr7:28025079:C:T	rs10480067	C	T	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr7	28042961	28042962	chr7:28042962:A:G	rs117536071	A	G	G	Sox2_MA0143.3	15	0	+	0	0	.
chr7	28070214	28070215	chr7:28070215:G:C	rs62449901	G	C	G	Sox2_MA0143.3	12	0	+	0	0	.
chr7	28112269	28112270	chr7:28112270:C:T	rs17156399	C	T	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr7	28312522	28312523	chr7:28312523:G:T	rs73080565	G	T	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr7	28389536	28389537	chr7:28389537:A:G	rs117898413	A	G	A	Sox2_MA0143.3	-11	0	+	0	0	.
chr7	28459250	28459251	chr7:28459251:C:T	rs177583	C	T	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr7	28512728	28512729	chr7:28512729:C:T	rs2391670	C	T	T	Sox2_MA0143.3	8	0	+	0	0	.
chr7	28591465	28591466	chr7:28591466:G:A	rs79317757	G	A	G	Sox2_MA0143.3	13	0	+	0	0	.
chr7	28621395	28621396	chr7:28621396:A:G	rs62443821	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr7	28625281	28625282	chr7:28625282:C:T	rs6974458	C	T	C	Sox2_MA0143.3	9	0	-	0	0	.
chr7	28676988	28676989	chr7:28676989:C:T	rs6978869	C	T	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr7	28685815	28685816	chr7:28685816:G:A	rs75604893	G	A	G	Sox2_MA0143.3	13	0	+	0	0	.
chr7	28865660	28865661	chr7:28865661:G:A	rs182776642	G	A	G	Sox2_MA0143.3	22	0	+	0	0	.
chr7	28865887	28865888	chr7:28865888:T:C	rs73294989	T	C	T	Sox2_MA0143.3	-4	0	+	0	0	.
chr7	28869065	28869066	chr7:28869066:T:C	rs7777049	T	C	C	Sox2_MA0143.3	13	0	-	0	0	.
chr7	28908128	28908129	chr7:28908129:G:A	rs10265971	G	A	G	Sox2_MA0143.3	26	0	-	0	0	.
chr7	28925641	28925642	chr7:28925642:C:T	rs1695514	C	T	T	Sox2_MA0143.3	-19	0	+	0	0	.
chr7	28931892	28931893	chr7:28931893:T:G	rs221126	T	G	T	Sox2_MA0143.3	-10	0	-	0	0	.
chr7	28939368	28939369	chr7:28939369:G:A	rs7782264	G	A	A	Sox2_MA0143.3	16	0	-	0	0	.
chr7	28990917	28990918	chr7:28990918:G:A	rs117233339	G	A	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr7	29013662	29013663	chr7:29013663:G:T	rs1403405	G	T	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr7	29019764	29019765	chr7:29019765:G:A	rs2648661	G	A	G	Sox2_MA0143.3	13	0	+	0	0	.
chr7	29072003	29072004	chr7:29072004:A:C	rs317719	A	C	C	Sox2_MA0143.3	17	0	+	0	0	.
chr7	29081070	29081071	chr7:29081071:C:T	rs7788835	C	T	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr7	29102575	29102576	chr7:29102576:G:C	rs17157514	G	C	G	Sox2_MA0143.3	27	0	-	0	0	.
chr7	29239891	29239892	chr7:29239892:A:G	rs905621872	A	G	A	Sox2_MA0143.3	2	1	+	9.613475778572903	3.494828071296623	CCATTGTT
chr7	29264727	29264728	chr7:29264728:G:A	rs149716521	G	A	-	Sox2_MA0143.3	15	0	+	0	0	.
chr7	29265046	29265047	chr7:29265047:C:A	rs245989	C	A	A	Sox2_MA0143.3	19	0	+	0	0	.
chr7	29265621	29265622	chr7:29265622:G:T	rs245990	G	T	G	Sox2_MA0143.3	22	0	+	0	0	.
chr7	29285367	29285368	chr7:29285368:A:G	rs57352014	A	G	A	Sox2_MA0143.3	18	0	-	0	0	.
chr7	29285689	29285690	chr7:29285690:C:T	rs557693226	C	T	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr7	29319161	29319162	chr7:29319162:T:C	rs40451	T	C	T	Sox2_MA0143.3	3	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr7	29366255	29366256	chr7:29366256:C:T	rs10274204	C	T	T	Sox2_MA0143.3	26	0	+	0	0	.
chr7	29370141	29370142	chr7:29370142:G:T	rs75700777	G	T	T	Sox2_MA0143.3	16	0	+	0	0	.
chr7	29508707	29508708	chr7:29508708:T:C	rs1420143	T	C	T	Sox2_MA0143.3	-13	0	+	0	0	.
chr7	29569774	29569775	chr7:29569775:G:A	rs1420113	G	A	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr7	29723263	29723264	chr7:29723264:A:C	rs142486835	A	C	a	Sox2_MA0143.3	22	0	+	0	0	.
chr7	29770399	29770400	chr7:29770400:C:A	rs10271558	C	A	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr7	29780649	29780650	chr7:29780650:T:C	rs79470490	T	C	T	Sox2_MA0143.3	19	0	-	0	0	.
chr7	29881906	29881907	chr7:29881907:C:T	rs146655770	C	T	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr7	29881907	29881908	chr7:29881908:G:C	rs740145	G	C	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr7	29921187	29921188	chr7:29921188:C:T	rs1049394	C	T	C	Sox2_MA0143.3	25	0	-	0	0	.
chr7	29921195	29921196	chr7:29921196:T:A	rs1049393	T	A	T	Sox2_MA0143.3	17	0	-	0	0	.
chr7	30062099	30062100	chr7:30062100:C:T	rs17326411	C	T	C	Sox2_MA0143.3	5	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr7	30090297	30090298	chr7:30090298:C:T	rs116939442	C	T	C	Sox2_MA0143.3	12	0	-	0	0	.
chr7	30179363	30179364	chr7:30179364:C:T	rs1476940	C	T	C	Sox2_MA0143.3	0	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr7	30223946	30223947	chr7:30223947:A:G	rs79563580	A	G	A	Sox2_MA0143.3	19	0	-	0	0	.
chr7	30326738	30326739	chr7:30326739:T:A	rs554804755	T	A	T	Sox2_MA0143.3	-11	0	-	0	0	.
chr7	30413276	30413277	chr7:30413277:C:A	rs73687864	C	A	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr7	30413301	30413302	chr7:30413302:C:T	rs11763119	C	T	C	Sox2_MA0143.3	15	0	+	0	0	.
chr7	30438558	30438559	chr7:30438559:C:T	rs79995024	C	T	C	Sox2_MA0143.3	12	0	-	0	0	.
chr7	30474824	30474825	chr7:30474825:A:G	rs6963954	A	G	A	Sox2_MA0143.3	27	0	+	0	0	.
chr7	30549211	30549212	chr7:30549212:G:C	rs76472402	G	C	G	Sox2_MA0143.3	7	1	-	9.206767037375712	8.864090315184848	CCTTTGTC
chr7	30556849	30556850	chr7:30556850:T:A	rs39738	T	A	T	Sox2_MA0143.3	23	0	+	0	0	.
chr7	30596884	30596885	chr7:30596885:A:G	rs77536553	A	G	A	Sox2_MA0143.3	-6	0	+	0	0	.
chr7	30692376	30692377	chr7:30692377:C:T	rs10271601	C	T	T	Sox2_MA0143.3	9	0	-	0	0	.
chr7	30699306	30699307	chr7:30699307:G:A	rs255115	G	A	G	Sox2_MA0143.3	-16	0	-	0	0	.
chr7	30721802	30721803	chr7:30721803:G:A	rs255151	G	A	A	Sox2_MA0143.3	23	0	-	0	0	.
chr7	30755802	30755803	chr7:30755803:C:T	rs35221354	C	T	C	Sox2_MA0143.3	8	0	-	0	0	.
chr7	30755819	30755820	chr7:30755820:T:G	rs4720015	T	G	T	Sox2_MA0143.3	-9	0	-	0	0	.
chr7	30777626	30777627	chr7:30777627:G:T	rs62446929	G	T	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr7	30777632	30777633	chr7:30777633:G:A	rs10230286	G	A	A	Sox2_MA0143.3	-11	0	-	0	0	.
chr7	30795889	30795890	chr7:30795890:C:T	rs79105141	C	T	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr7	30795902	30795903	chr7:30795903:C:T	rs62446941	C	T	C	Sox2_MA0143.3	0	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr7	30800598	30800599	chr7:30800599:A:G	rs7796100	A	G	A	Sox2_MA0143.3	-12	0	-	0	0	.
chr7	30833811	30833812	chr7:30833812:G:A	rs1410424601	G	A	G	Sox2_MA0143.3	1	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr7	30878747	30878748	chr7:30878748:G:A	rs2107550	G	A	A	Sox2_MA0143.3	-14	0	-	0	0	.
chr7	30879618	30879619	chr7:30879619:G:A	rs80098877	G	A	G	Sox2_MA0143.3	11	0	+	0	0	.
chr7	30887484	30887485	chr7:30887485:C:T	rs59089210	C	T	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr7	30911794	30911795	chr7:30911795:C:G	chr7:30911795:C:G	C	G	C	Sox2_MA0143.3	0	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr7	30911810	30911811	chr7:30911811:G:T	rs146848267	G	T	G	Sox2_MA0143.3	16	0	+	0	0	.
chr7	30929997	30929998	chr7:30929998:C:T	rs150046895	C	T	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr7	30980735	30980736	chr7:30980736:C:T	rs28371567	C	T	T	Sox2_MA0143.3	-8	0	+	0	0	.
chr7	30983492	30983493	chr7:30983493:G:A	rs10252510	G	A	A	Sox2_MA0143.3	-6	0	-	0	0	.
chr7	30997512	30997513	chr7:30997513:T:C	rs7796657	T	C	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr7	31070152	31070153	chr7:31070153:C:T	rs10277350	C	T	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr7	31092746	31092747	chr7:31092747:T:C	rs373542218	T	C	T	Sox2_MA0143.3	4	1	+	8.676919043985553	1.7681642646703322	CCATTGTG
chr7	31125440	31125441	chr7:31125441:T:C	rs58256725	T	C	T	Sox2_MA0143.3	-11	0	-	0	0	.
chr7	31153506	31153507	chr7:31153507:A:G	rs143689051	A	G	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr7	31309592	31309593	chr7:31309593:A:G	rs80242732	A	G	A	Sox2_MA0143.3	-8	0	-	0	0	.
chr7	31318487	31318488	chr7:31318488:C:T	rs141622494	C	T	C	Sox2_MA0143.3	13	0	+	0	0	.
chr7	31419157	31419158	chr7:31419158:G:T	rs17474907	G	T	G	Sox2_MA0143.3	9	0	+	0	0	.
chr7	31640628	31640629	chr7:31640629:T:G	rs11765670	T	G	T	Sox2_MA0143.3	3	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr7	31642838	31642839	chr7:31642839:C:T	rs4141001	C	T	C	Sox2_MA0143.3	19	0	-	0	0	.
chr7	31649743	31649744	chr7:31649744:G:T	rs12701132	G	T	G	Sox2_MA0143.3	14	0	-	0	0	.
chr7	31691081	31691082	chr7:31691082:C:T	rs2284226	C	T	C	Sox2_MA0143.3	25	0	-	0	0	.
chr7	31693121	31693122	chr7:31693122:G:A	rs34171	G	A	G	Sox2_MA0143.3	18	0	+	0	0	.
chr7	31710678	31710679	chr7:31710679:T:G	rs34186	T	G	G	Sox2_MA0143.3	3	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr7	31789480	31789481	chr7:31789481:A:G	rs2072423	A	G	G	Sox2_MA0143.3	22	0	-	0	0	.
chr7	31828750	31828751	chr7:31828751:G:A	rs140932442	G	A	G	Sox2_MA0143.3	16	0	+	0	0	.
chr7	31830367	31830368	chr7:31830368:T:C	rs12701141	T	C	T	Sox2_MA0143.3	11	0	-	0	0	.
chr7	31884399	31884400	chr7:31884400:T:C	rs188830862	T	C	T	Sox2_MA0143.3	-13	0	-	0	0	.
chr7	31897340	31897341	chr7:31897341:T:C	rs78428274	T	C	T	Sox2_MA0143.3	7	1	-	3.5547341015215945	8.864090315184848	CCTTTGTA
chr7	31995843	31995844	chr7:31995844:C:G	rs17336016	C	G	C	Sox2_MA0143.3	0	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr7	32060516	32060517	chr7:32060517:T:C	rs7794195	T	C	T	Sox2_MA0143.3	-13	0	+	0	0	.
chr7	32102691	32102692	chr7:32102692:G:A	rs910666615	G	A	G	Sox2_MA0143.3	1	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr7	32251850	32251851	chr7:32251851:C:T	rs12701206	C	T	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr7	32283487	32283488	chr7:32283488:T:C	rs17161132	T	C	T	Sox2_MA0143.3	20	0	-	0	0	.
chr7	32450186	32450187	chr7:32450187:C:T	rs1376278	C	T	T	Sox2_MA0143.3	-9	0	+	0	0	.
chr7	32461817	32461818	chr7:32461818:T:C	rs935769	T	C	T	Sox2_MA0143.3	15	0	-	0	0	.
chr7	32461852	32461853	chr7:32461853:T:A	rs935771	T	A	T	Sox2_MA0143.3	-20	0	-	0	0	.
chr7	32496307	32496308	chr7:32496308:G:A	rs9655340	G	A	G	Sox2_MA0143.3	20	0	+	0	0	.
chr7	32498066	32498067	chr7:32498067:G:A	rs13244332	G	A	G	Sox2_MA0143.3	16	0	+	0	0	.
chr7	32785646	32785647	chr7:32785647:G:C	rs11762761	G	C	G	Sox2_MA0143.3	16	0	-	0	0	.
chr7	32891447	32891448	chr7:32891448:G:A	chr7:32891448:G:A	G	A	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr7	33067188	33067189	chr7:33067189:A:G	rs10265452	A	G	A	Sox2_MA0143.3	10	0	-	0	0	.
chr7	33144513	33144514	chr7:33144514:T:C	rs10241784	T	C	C	Sox2_MA0143.3	2	1	-	9.613475778572903	3.494828071296623	CCATTGTT
chr7	33233184	33233185	chr7:33233185:C:T	rs1861298	C	T	C	Sox2_MA0143.3	15	0	+	0	0	.
chr7	33417888	33417889	chr7:33417889:G:A	rs1419927	G	A	A	Sox2_MA0143.3	-19	0	-	0	0	.
chr7	33501471	33501472	chr7:33501472:A:G	rs1405866642	A	G	A	Sox2_MA0143.3	-10	0	-	0	0	.
chr7	33520826	33520827	chr7:33520827:G:C	rs4720121	G	C	G	Sox2_MA0143.3	25	0	+	0	0	.
chr7	33547668	33547669	chr7:33547669:A:G	rs73109624	A	G	A	Sox2_MA0143.3	-4	0	+	0	0	.
chr7	33602124	33602125	chr7:33602125:G:A	rs1451021	G	A	A	Sox2_MA0143.3	-20	0	-	0	0	.
chr7	33645162	33645163	chr7:33645163:T:C	rs2392252	T	C	T	Sox2_MA0143.3	17	0	+	0	0	.
chr7	33761187	33761188	chr7:33761188:T:C	rs112910424	T	C	T	Sox2_MA0143.3	-17	0	+	0	0	.
chr7	33982688	33982689	chr7:33982689:C:T	rs10486625	C	T	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr7	33982721	33982722	chr7:33982722:T:C	rs1029075968	T	C	T	Sox2_MA0143.3	14	0	+	0	0	.
chr7	33986903	33986904	chr7:33986904:G:A	rs74607242	G	A	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr7	34133515	34133516	chr7:34133516:C:G	rs80264848	C	G	C	Sox2_MA0143.3	0	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr7	34486545	34486546	chr7:34486546:T:C	rs77864089	T	C	T	Sox2_MA0143.3	-7	0	+	0	0	.
chr7	34613734	34613735	chr7:34613735:A:T	rs113609304	A	T	A	Sox2_MA0143.3	-20	0	-	0	0	.
chr7	34751229	34751230	chr7:34751230:G:C	rs17788685	G	C	C	Sox2_MA0143.3	22	0	-	0	0	.
chr7	34780918	34780919	chr7:34780919:G:C	rs35116719	G	C	G	Sox2_MA0143.3	13	0	-	0	0	.
chr7	34780936	34780937	chr7:34780937:G:A	rs35928424	G	A	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr7	35243436	35243437	chr7:35243437:G:A	rs17606656	G	A	A	Sox2_MA0143.3	25	0	-	0	0	.
chr7	35250612	35250613	chr7:35250613:C:A	rs714958	C	A	A	Sox2_MA0143.3	22	0	-	0	0	.
chr7	35250635	35250636	chr7:35250636:G:A	rs714957	G	A	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr7	35356347	35356348	chr7:35356348:C:A	rs59332197	C	A	A	Sox2_MA0143.3	-4	0	-	0	0	.
chr7	35360056	35360057	chr7:35360057:C:G	rs62455268	C	G	C	Sox2_MA0143.3	1	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr7	35470102	35470103	chr7:35470103:A:G	rs76884343	A	G	A	Sox2_MA0143.3	4	1	-	8.864090315184848	1.9553355358696274	CCTTTGTG
chr7	35496319	35496320	chr7:35496320:C:A	rs1035218	C	A	C	Sox2_MA0143.3	8	0	-	0	0	.
chr7	35534127	35534128	chr7:35534128:A:G	rs6973719	A	G	G	Sox2_MA0143.3	24	0	+	0	0	.
chr7	35584871	35584872	chr7:35584872:T:C	rs1593220	T	C	C	Sox2_MA0143.3	17	0	-	0	0	.
chr7	36030235	36030236	chr7:36030236:T:G	rs10247814	T	G	T	Sox2_MA0143.3	4	1	+	3.5547341015215945	-3.3540206777936254	CCTTTGTA
chr7	36066338	36066339	chr7:36066339:G:A	rs2272480	G	A	A	Sox2_MA0143.3	15	0	-	0	0	.
chr7	36090978	36090979	chr7:36090979:C:T	rs73103026	C	T	c	Sox2_MA0143.3	12	0	+	0	0	.
chr7	36104162	36104163	chr7:36104163:G:A	rs56018444	G	A	G	Sox2_MA0143.3	22	0	-	0	0	.
chr7	36180293	36180294	chr7:36180294:C:G	rs28541815	C	G	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr7	36189103	36189104	chr7:36189104:A:T	rs2024443	A	T	A	Sox2_MA0143.3	17	0	+	0	0	.
chr7	36189797	36189798	chr7:36189798:A:G	rs2726057	A	G	A	Sox2_MA0143.3	24	0	+	0	0	.
chr7	36190658	36190659	chr7:36190659:C:G	rs1558661	C	G	C	Sox2_MA0143.3	8	0	+	0	0	.
chr7	36209117	36209118	chr7:36209118:A:G	rs73338940	A	G	A	Sox2_MA0143.3	-17	0	-	0	0	.
chr7	36301143	36301144	chr7:36301144:G:A	rs118038635	G	A	G	Sox2_MA0143.3	11	0	+	0	0	.
chr7	36302555	36302556	chr7:36302556:C:G	rs196625	C	G	C	Sox2_MA0143.3	11	0	+	0	0	.
chr7	36305584	36305585	chr7:36305585:G:A	rs4723511	G	A	G	Sox2_MA0143.3	-11	0	+	0	0	.
chr7	36405312	36405313	chr7:36405313:A:G	rs197366	A	G	A	Sox2_MA0143.3	-18	0	+	0	0	.
chr7	36474007	36474008	chr7:36474008:C:A	rs2160000	C	A	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr7	36474488	36474489	chr7:36474489:G:T	rs76827509	G	T	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr7	36474496	36474497	chr7:36474497:G:A	rs76358136	G	A	A	Sox2_MA0143.3	-12	0	-	0	0	.
chr7	36475300	36475301	chr7:36475301:G:T	rs11765557	G	T	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr7	36607233	36607234	chr7:36607234:G:A	rs76389356	G	A	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr7	36607240	36607241	chr7:36607241:C:T	rs3735389	C	T	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr7	36645538	36645539	chr7:36645539:T:C	rs7794780	T	C	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr7	36648560	36648561	chr7:36648561:T:C	rs117832454	T	C	T	Sox2_MA0143.3	-10	0	+	0	0	.
chr7	36667277	36667278	chr7:36667278:C:T	rs11766973	C	T	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr7	36717857	36717858	chr7:36717858:C:T	rs4723563	C	T	T	Sox2_MA0143.3	-9	0	-	0	0	.
chr7	36723954	36723955	chr7:36723955:C:T	rs6462703	C	T	T	Sox2_MA0143.3	-20	0	+	0	0	.
chr7	36781635	36781636	chr7:36781636:A:G	rs4259316	A	G	A	Sox2_MA0143.3	25	0	+	0	0	.
chr7	36813319	36813320	chr7:36813320:C:G	rs10282290	C	G	C	Sox2_MA0143.3	9	0	-	0	0	.
chr7	37019103	37019104	chr7:37019104:T:G	rs6946017	T	G	T	Sox2_MA0143.3	18	0	-	0	0	.
chr7	37032146	37032147	chr7:37032147:C:T	rs1422434678	C	T	C	Sox2_MA0143.3	14	0	+	0	0	.
chr7	37100949	37100950	chr7:37100950:G:A	rs11976922	G	A	G	Sox2_MA0143.3	25	0	-	0	0	.
chr7	37112875	37112876	chr7:37112876:T:C	rs79714232	T	C	T	Sox2_MA0143.3	-6	0	-	0	0	.
chr7	37118035	37118036	chr7:37118036:C:A	rs2111035	C	A	A	Sox2_MA0143.3	-11	0	-	0	0	.
chr7	37210829	37210830	chr7:37210830:G:A	rs6980211	G	A	A	Sox2_MA0143.3	10	0	-	0	0	.
chr7	37263989	37263990	chr7:37263990:A:G	rs2717972	A	G	A	Sox2_MA0143.3	12	0	-	0	0	.
chr7	37268057	37268058	chr7:37268058:A:G	rs2541089	A	G	A	Sox2_MA0143.3	24	0	-	0	0	.
chr7	37355768	37355769	chr7:37355769:T:C	rs2717954	T	C	T	Sox2_MA0143.3	-11	0	-	0	0	.
chr7	37370174	37370175	chr7:37370175:C:G	rs76926062	C	G	C	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr7	37373086	37373087	chr7:37373087:T:C	rs115656884	T	C	T	Sox2_MA0143.3	3	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr7	37405124	37405125	chr7:37405125:T:G	rs17171026	T	G	T	Sox2_MA0143.3	13	0	-	0	0	.
chr7	37406515	37406516	chr7:37406516:G:A	rs55803842	G	A	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr7	37433467	37433468	chr7:37433468:G:A	rs1647791	G	A	G	Sox2_MA0143.3	18	0	-	0	0	.
chr7	37552364	37552365	chr7:37552365:G:A	rs6462772	G	A	A	Sox2_MA0143.3	-8	0	-	0	0	.
chr7	37728927	37728928	chr7:37728928:A:T	rs74765477	A	T	A	Sox2_MA0143.3	-13	0	-	0	0	.
chr7	37729616	37729617	chr7:37729617:T:A	rs2709101	T	A	A	Sox2_MA0143.3	-1	0	-	0	0	.
chr7	37853672	37853673	chr7:37853673:T:A	rs78281083	T	A	T	Sox2_MA0143.3	4	1	+	8.676919043985553	1.7681642646703322	CCATTGTG
chr7	37952438	37952439	chr7:37952439:A:C	rs2722281	A	C	a	Sox2_MA0143.3	20	0	+	0	0	.
chr7	37987325	37987326	chr7:37987326:A:G	rs1717764	A	G	A	Sox2_MA0143.3	-4	0	+	0	0	.
chr7	38106170	38106171	chr7:38106171:C:T	rs2140535	C	T	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr7	38180263	38180264	chr7:38180264:A:C	rs7349990	A	C	A	Sox2_MA0143.3	-14	0	+	0	0	.
chr7	38190179	38190180	chr7:38190180:A:G	rs10951552	A	G	A	Sox2_MA0143.3	13	0	-	0	0	.
chr7	38291814	38291815	chr7:38291815:C:T	rs76807453	C	T	c	Sox2_MA0143.3	24	0	+	0	0	.
chr7	38336369	38336370	chr7:38336370:A:G	rs3948659	A	G	A	Sox2_MA0143.3	-19	0	-	0	0	.
chr7	38403957	38403958	chr7:38403958:C:T	rs80187045	C	T	C	Sox2_MA0143.3	-20	0	-	0	0	.
chr7	38469691	38469692	chr7:38469692:C:A	rs73120243	C	A	C	Sox2_MA0143.3	12	0	-	0	0	.
chr7	38492209	38492210	chr7:38492210:T:G	chr7:38492210:T:G	T	G	T	Sox2_MA0143.3	20	0	-	0	0	.
chr7	38547455	38547456	chr7:38547456:A:G	rs78020227	A	G	A	Sox2_MA0143.3	18	0	-	0	0	.
chr7	38577421	38577422	chr7:38577422:C:T	rs6965722	C	T	t	Sox2_MA0143.3	-16	0	+	0	0	.
chr7	38586692	38586693	chr7:38586693:C:T	rs57620524	C	T	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr7	38846238	38846239	chr7:38846239:G:A	rs1473138	G	A	A	Sox2_MA0143.3	-5	0	+	0	0	.
chr7	38867755	38867756	chr7:38867756:A:G	rs6960945	A	G	A	Sox2_MA0143.3	-15	0	-	0	0	.
chr7	38880760	38880761	chr7:38880761:A:G	rs115609420	A	G	A	Sox2_MA0143.3	14	0	+	0	0	.
chr7	39017431	39017432	chr7:39017432:A:G	rs859513	A	G	A	Sox2_MA0143.3	-19	0	+	0	0	.
chr7	39017461	39017462	chr7:39017462:C:T	rs35787066	C	T	C	Sox2_MA0143.3	11	0	+	0	0	.
chr7	39042871	39042872	chr7:39042872:A:G	rs10085866	A	G	A	Sox2_MA0143.3	-16	0	+	0	0	.
chr7	39043877	39043878	chr7:39043878:G:A	rs1527949	G	A	G	Sox2_MA0143.3	10	0	+	0	0	.
chr7	39186534	39186535	chr7:39186535:T:G	rs35138561	T	G	T	Sox2_MA0143.3	-4	0	+	0	0	.
chr7	39248798	39248799	chr7:39248799:C:T	rs73380918	C	T	C	Sox2_MA0143.3	27	0	+	0	0	.
chr7	39266564	39266565	chr7:39266565:A:G	rs4317479	A	G	G	Sox2_MA0143.3	25	0	-	0	0	.
chr7	39271445	39271446	chr7:39271446:G:C	rs4577868	G	C	G	Sox2_MA0143.3	16	0	-	0	0	.
chr7	39349347	39349348	chr7:39349348:G:C	rs740509	G	C	C	Sox2_MA0143.3	12	0	+	0	0	.
chr7	39434235	39434236	chr7:39434236:A:T	rs74334503	A	T	A	Sox2_MA0143.3	-17	0	-	0	0	.
chr7	39566454	39566455	chr7:39566455:C:T	rs116520088	C	T	C	Sox2_MA0143.3	13	0	-	0	0	.
chr7	39566474	39566475	chr7:39566475:G:T	rs7777434	G	T	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr7	39701246	39701247	chr7:39701247:A:G	rs2237499	A	G	a	Sox2_MA0143.3	-19	0	-	0	0	.
chr7	39730990	39730991	chr7:39730991:A:T	rs10267545	A	T	.	Sox2_MA0143.3	16	0	-	0	0	.
chr7	39757617	39757618	chr7:39757618:A:G	chr7:39757618:A:G	A	G	.	Sox2_MA0143.3	16	0	-	0	0	.
chr7	39921789	39921790	chr7:39921790:G:A	rs186173972	G	A	G	Sox2_MA0143.3	7	1	-	9.019595766176417	9.613475778572903	CCATTGTC
chr7	40134733	40134734	chr7:40134734:G:T	rs1049436728	G	T	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr7	40331741	40331742	chr7:40331742:A:G	rs77497351	A	G	A	Sox2_MA0143.3	3	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr7	40494051	40494052	chr7:40494052:A:G	rs112340233	A	G	A	Sox2_MA0143.3	22	0	+	0	0	.
chr7	40572861	40572862	chr7:40572862:T:C	rs17171737	T	C	C	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr7	40761244	40761245	chr7:40761245:C:G	rs79562541	C	G	C	Sox2_MA0143.3	1	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr7	40808556	40808557	chr7:40808557:C:A	rs140594621	C	A	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr7	40900393	40900394	chr7:40900394:A:G	rs146302332	A	G	A	Sox2_MA0143.3	17	0	+	0	0	.
chr7	40987280	40987281	chr7:40987281:G:T	rs776043947	G	T	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr7	41006342	41006343	chr7:41006343:T:A	rs61210370	T	A	T	Sox2_MA0143.3	-6	0	-	0	0	.
chr7	41006349	41006350	chr7:41006350:A:G	rs55801338	A	G	A	Sox2_MA0143.3	-13	0	-	0	0	.
chr7	41108081	41108082	chr7:41108082:T:G	rs73690456	T	G	T	Sox2_MA0143.3	-19	0	+	0	0	.
chr7	41115098	41115099	chr7:41115099:T:G	rs77938873	T	G	T	Sox2_MA0143.3	10	0	+	0	0	.
chr7	41122966	41122967	chr7:41122967:G:A	rs188485422	G	A	G	Sox2_MA0143.3	10	0	-	0	0	.
chr7	41145989	41145990	chr7:41145990:G:A	rs73687927	G	A	G	Sox2_MA0143.3	27	0	+	0	0	.
chr7	41336507	41336508	chr7:41336508:A:T	rs42960	A	T	A	Sox2_MA0143.3	21	0	-	0	0	.
chr7	41437295	41437296	chr7:41437296:C:T	rs4724046	C	T	C	Sox2_MA0143.3	12	0	+	0	0	.
chr7	41467144	41467145	chr7:41467145:A:T	chr7:41467145:A:T	A	T	A	Sox2_MA0143.3	14	0	+	0	0	.
chr7	41472140	41472141	chr7:41472141:A:G	rs273148	A	G	G	Sox2_MA0143.3	-12	0	+	0	0	.
chr7	41491289	41491290	chr7:41491290:G:C	rs508202	G	C	C	Sox2_MA0143.3	5	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr7	41628826	41628827	chr7:41628827:T:C	chr7:41628827:T:C	T	C	T	Sox2_MA0143.3	-10	0	-	0	0	.
chr7	41732945	41732946	chr7:41732946:C:T	rs953330274	C	T	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr7	41799256	41799257	chr7:41799257:T:C	rs117260865	T	C	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr7	41803847	41803848	chr7:41803848:C:T	rs75591472	C	T	C	Sox2_MA0143.3	24	0	+	0	0	.
chr7	41840359	41840360	chr7:41840360:A:G	rs6415274	A	G	G	Sox2_MA0143.3	12	0	+	0	0	.
chr7	41991680	41991681	chr7:41991681:T:C	rs2237428	T	C	T	Sox2_MA0143.3	27	0	-	0	0	.
chr7	41991704	41991705	chr7:41991705:A:G	rs11771690	A	G	A	Sox2_MA0143.3	3	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr7	41997011	41997012	chr7:41997012:T:C	rs182994866	T	C	T	Sox2_MA0143.3	-10	0	-	0	0	.
chr7	42106770	42106771	chr7:42106771:G:A	rs2141175	G	A	A	Sox2_MA0143.3	18	0	+	0	0	.
chr7	42125654	42125655	chr7:42125655:C:T	rs150434956	C	T	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr7	42269351	42269352	chr7:42269352:G:T	rs17172030	G	T	T	Sox2_MA0143.3	-14	0	-	0	0	.
chr7	42347872	42347873	chr7:42347873:G:A	rs151043316	G	A	G	Sox2_MA0143.3	12	0	+	0	0	.
chr7	42457506	42457507	chr7:42457507:A:G	rs73688503	A	G	A	Sox2_MA0143.3	18	0	+	0	0	.
chr7	42567313	42567314	chr7:42567314:C:T	rs76990766	C	T	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr7	42686622	42686623	chr7:42686623:G:A	rs57089946	G	A	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr7	42763365	42763366	chr7:42763366:G:A	rs771221466	G	A	G	Sox2_MA0143.3	20	0	-	0	0	.
chr7	42763403	42763404	chr7:42763404:G:A	rs10231571	G	A	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr7	42845361	42845362	chr7:42845362:T:C	rs17172123	T	C	C	Sox2_MA0143.3	17	0	-	0	0	.
chr7	42893701	42893702	chr7:42893702:G:T	rs142723420	G	T	G	Sox2_MA0143.3	0	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr7	42933833	42933834	chr7:42933834:G:A	rs115264780	G	A	G	Sox2_MA0143.3	0	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr7	42950383	42950384	chr7:42950384:C:T	rs664104	C	T	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr7	43021579	43021580	chr7:43021580:G:C	rs7804199	G	C	G	Sox2_MA0143.3	-12	0	+	0	0	.
chr7	43108365	43108366	chr7:43108366:A:G	rs7798775	A	G	A	Sox2_MA0143.3	16	0	+	0	0	.
chr7	43172952	43172953	chr7:43172953:C:G	rs532695533	C	G	C	Sox2_MA0143.3	23	0	+	0	0	.
chr7	43339244	43339245	chr7:43339245:G:A	rs978056	G	A	A	Sox2_MA0143.3	-11	0	+	0	0	.
chr7	43363714	43363715	chr7:43363715:G:A	rs36014678	G	A	A	Sox2_MA0143.3	-11	0	+	0	0	.
chr7	43363737	43363738	chr7:43363738:G:A	rs34140960	G	A	A	Sox2_MA0143.3	12	0	+	0	0	.
chr7	43364679	43364680	chr7:43364680:C:G	rs75406256	C	G	C	Sox2_MA0143.3	-20	0	-	0	0	.
chr7	43391545	43391546	chr7:43391546:G:C	rs10253699	G	C	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr7	43391559	43391560	chr7:43391560:A:C	rs10224012	A	C	C	Sox2_MA0143.3	11	0	+	0	0	.
chr7	43510111	43510112	chr7:43510112:T:C	rs10240460	T	C	C	Sox2_MA0143.3	7	1	+	9.800647049772198	9.206767037375712	CCTTTGTT
chr7	43510112	43510113	chr7:43510113:G:A	rs75828917	G	A	G	Sox2_MA0143.3	8	0	+	0	0	.
chr7	43520657	43520658	chr7:43520658:T:A	rs7810023	T	A	T	Sox2_MA0143.3	16	0	-	0	0	.
chr7	43579088	43579089	chr7:43579089:T:C	rs34884241	T	C	C	Sox2_MA0143.3	15	0	+	0	0	.
chr7	43721113	43721114	chr7:43721114:C:T	rs13240269	C	T	T	Sox2_MA0143.3	10	0	-	0	0	.
chr7	43787814	43787815	chr7:43787815:G:A	rs849165	G	A	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr7	43808945	43808946	chr7:43808946:C:A	rs35482897	C	A	c	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr7	43872130	43872131	chr7:43872131:C:T	rs2528399	C	T	C	Sox2_MA0143.3	21	0	+	0	0	.
chr7	44020858	44020859	chr7:44020859:G:A	rs144652438	G	A	g	Sox2_MA0143.3	10	0	+	0	0	.
chr7	44020864	44020865	chr7:44020865:A:G	rs4337993	A	G	a	Sox2_MA0143.3	16	0	+	0	0	.
chr7	44049619	44049620	chr7:44049620:G:A	rs79290301	G	A	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr7	44050622	44050623	chr7:44050623:C:G	rs757257667	C	G	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr7	44109670	44109671	chr7:44109671:C:T	rs11975687	C	T	C	Sox2_MA0143.3	12	0	+	0	0	.
chr7	44133537	44133538	chr7:44133538:T:G	rs769898104	T	G	T	Sox2_MA0143.3	-9	0	+	0	0	.
chr7	44147949	44147950	chr7:44147950:G:A	chr7:44147950:G:A	G	A	G	Sox2_MA0143.3	8	0	-	0	0	.
chr7	44176998	44176999	chr7:44176999:T:C	rs2284777	T	C	C	Sox2_MA0143.3	6	1	+	9.019595766176417	2.110840986861197	CCATTGTC
chr7	44177009	44177010	chr7:44177010:C:T	rs60240824	C	T	C	Sox2_MA0143.3	17	0	+	0	0	.
chr7	44201159	44201160	chr7:44201160:C:T	rs141044177	C	T	c	Sox2_MA0143.3	10	0	-	0	0	.
chr7	44201163	44201164	chr7:44201164:A:G	rs150272603	A	G	a	Sox2_MA0143.3	6	1	-	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr7	44203979	44203980	chr7:44203980:A:G	rs139059183	A	G	A	Sox2_MA0143.3	7	1	+	3.5547341015215945	8.864090315184848	CCTTTGTA
chr7	44276425	44276426	chr7:44276426:A:C	rs73691450	A	C	C	Sox2_MA0143.3	26	0	-	0	0	.
chr7	44276430	44276431	chr7:44276431:C:A	rs184878794	C	A	c	Sox2_MA0143.3	21	0	-	0	0	.
chr7	44276430	44276431	chr7:44276431:C:G	chr7:44276431:C:G	C	G	c	Sox2_MA0143.3	21	0	-	0	0	.
chr7	44375347	44375348	chr7:44375348:G:A	rs115363526	G	A	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr7	44389690	44389691	chr7:44389691:G:C	rs7806467	G	C	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr7	44473748	44473749	chr7:44473749:A:G	rs59340950	A	G	a	Sox2_MA0143.3	13	0	-	0	0	.
chr7	44544951	44544952	chr7:44544952:G:C	rs10260606	G	C	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr7	44570252	44570253	chr7:44570253:C:T	rs217377	C	T	T	Sox2_MA0143.3	9	0	-	0	0	.
chr7	44581993	44581994	chr7:44581994:C:G	rs145682845	C	G	C	Sox2_MA0143.3	26	0	-	0	0	.
chr7	44582014	44582015	chr7:44582015:C:G	rs370105577	C	G	C	Sox2_MA0143.3	5	1	-	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr7	44627966	44627967	chr7:44627967:G:T	rs7808137	G	T	g	Sox2_MA0143.3	-10	0	+	0	0	.
chr7	44640081	44640082	chr7:44640082:G:A	rs117389042	G	A	G	Sox2_MA0143.3	5	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr7	44748853	44748854	chr7:44748854:C:T	rs574542664	C	T	C	Sox2_MA0143.3	9	0	+	0	0	.
chr7	44750465	44750466	chr7:44750466:C:T	rs138406503	C	T	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr7	44881107	44881108	chr7:44881108:T:A	rs13221185	T	A	T	Sox2_MA0143.3	-5	0	+	0	0	.
chr7	44980991	44980992	chr7:44980992:A:G	rs138030790	A	G	A	Sox2_MA0143.3	12	0	-	0	0	.
chr7	44986840	44986841	chr7:44986841:C:T	rs188744303	C	T	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr7	45024440	45024441	chr7:45024441:G:C	rs884082	G	C	G	Sox2_MA0143.3	16	0	+	0	0	.
chr7	45047402	45047403	chr7:45047403:G:A	rs10235394	G	A	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr7	45069278	45069279	chr7:45069279:C:T	rs6943576	C	T	T	Sox2_MA0143.3	25	0	+	0	0	.
chr7	45075443	45075444	chr7:45075444:T:G	rs4724355	T	G	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr7	45075444	45075445	chr7:45075445:C:A	rs4724356	C	A	A	Sox2_MA0143.3	0	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr7	45107056	45107057	chr7:45107057:C:A	rs3757572	C	A	A	Sox2_MA0143.3	-11	0	-	0	0	.
chr7	45134489	45134490	chr7:45134490:A:G	rs10231255	A	G	G	Sox2_MA0143.3	13	0	-	0	0	.
chr7	45171486	45171487	chr7:45171487:G:A	rs13242575	G	A	G	Sox2_MA0143.3	7	1	+	8.676919043985553	3.3675628303222993	CCATTGTG
chr7	45172019	45172020	chr7:45172020:T:G	rs13230259	T	G	G	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr7	45172033	45172034	chr7:45172034:C:G	rs1294949	C	G	C	Sox2_MA0143.3	17	0	+	0	0	.
chr7	45211262	45211263	chr7:45211263:T:C	rs756510	T	C	C	Sox2_MA0143.3	16	0	+	0	0	.
chr7	45219955	45219956	chr7:45219956:A:G	rs75852187	A	G	A	Sox2_MA0143.3	-20	0	+	0	0	.
chr7	45219996	45219997	chr7:45219997:T:C	rs1294859	T	C	C	Sox2_MA0143.3	21	0	+	0	0	.
chr7	45266316	45266317	chr7:45266317:A:G	rs62459227	A	G	G	Sox2_MA0143.3	12	0	+	0	0	.
chr7	45294842	45294843	chr7:45294843:A:G	rs1123150	A	G	a	Sox2_MA0143.3	-16	0	+	0	0	.
chr7	45494989	45494990	chr7:45494990:C:T	rs11973857	C	T	T	Sox2_MA0143.3	17	0	+	0	0	.
chr7	45579242	45579243	chr7:45579243:G:A	rs191203239	G	A	g	Sox2_MA0143.3	-5	0	+	0	0	.
chr7	45579268	45579269	chr7:45579269:C:G	rs76323096	C	G	C	Sox2_MA0143.3	21	0	+	0	0	.
chr7	45590245	45590246	chr7:45590246:C:T	rs11771815	C	T	T	Sox2_MA0143.3	-13	0	+	0	0	.
chr7	45626457	45626458	chr7:45626458:C:T	rs76085404	C	T	C	Sox2_MA0143.3	16	0	+	0	0	.
chr7	45683027	45683028	chr7:45683028:C:T	rs559046469	C	T	C	Sox2_MA0143.3	15	0	-	0	0	.
chr7	45722352	45722353	chr7:45722353:A:C	rs3735666	A	C	A	Sox2_MA0143.3	4	1	-	8.864090315184848	1.9553355358696274	CCTTTGTG
chr7	45811868	45811869	chr7:45811869:A:G	rs111344488	A	G	.	Sox2_MA0143.3	3	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr7	45829856	45829857	chr7:45829857:C:T	rs185642770	C	T	.	Sox2_MA0143.3	24	0	+	0	0	.
chr7	45922863	45922864	chr7:45922864:T:G	rs2132570	T	G	G	Sox2_MA0143.3	-3	0	-	0	0	.
chr7	45970500	45970501	chr7:45970501:C:G	rs10260816	C	G	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr7	45981202	45981203	chr7:45981203:A:G	rs111344016	A	G	A	Sox2_MA0143.3	26	0	-	0	0	.
chr7	46050185	46050186	chr7:46050186:G:A	rs17172628	G	A	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr7	46072961	46072962	chr7:46072962:C:T	rs182544684	C	T	A	Sox2_MA0143.3	24	0	-	0	0	.
chr7	46119143	46119144	chr7:46119144:G:T	rs12532079	G	T	g	Sox2_MA0143.3	-18	0	+	0	0	.
chr7	46168684	46168685	chr7:46168685:G:C	rs10085605	G	C	G	Sox2_MA0143.3	8	0	+	0	0	.
chr7	46218923	46218924	chr7:46218924:G:A	rs6973493	G	A	G	Sox2_MA0143.3	0	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr7	46320055	46320056	chr7:46320056:C:T	rs7809218	C	T	c	Sox2_MA0143.3	-11	0	+	0	0	.
chr7	46456932	46456933	chr7:46456933:C:T	rs10261042	C	T	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr7	46468803	46468804	chr7:46468804:G:A	rs148926292	G	A	G	Sox2_MA0143.3	-5	0	+	0	0	.
chr7	46513772	46513773	chr7:46513773:C:T	rs12702227	C	T	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr7	46557938	46557939	chr7:46557939:G:A	rs1125484	G	A	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr7	46557950	46557951	chr7:46557951:T:C	rs143915146	T	C	T	Sox2_MA0143.3	-5	0	+	0	0	.
chr7	46604121	46604122	chr7:46604122:A:C	rs11763117	A	C	A	Sox2_MA0143.3	9	0	-	0	0	.
chr7	46683656	46683657	chr7:46683657:C:T	rs150918733	C	T	C	Sox2_MA0143.3	7	1	+	9.206767037375712	9.800647049772198	CCTTTGTC
chr7	46747017	46747018	chr7:46747018:C:G	rs12672090	C	G	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr7	46772852	46772853	chr7:46772853:G:A	rs148961574	G	A	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr7	46786457	46786458	chr7:46786458:T:C	rs1525231	T	C	T	Sox2_MA0143.3	6	1	+	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr7	46827828	46827829	chr7:46827829:A:T	rs2881203	A	T	T	Sox2_MA0143.3	18	0	-	0	0	.
chr7	46864640	46864641	chr7:46864641:G:A	rs12702266	G	A	G	Sox2_MA0143.3	-3	0	+	0	0	.
chr7	46929563	46929564	chr7:46929564:A:G	rs1157813	A	G	a	Sox2_MA0143.3	2	1	+	9.613475778572903	3.494828071296623	CCATTGTT
chr7	46954206	46954207	chr7:46954207:C:T	rs6949085	C	T	T	Sox2_MA0143.3	16	0	-	0	0	.
chr7	47040123	47040124	chr7:47040124:T:C	rs6463376	T	C	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr7	47040157	47040158	chr7:47040158:G:A	rs79114418	G	A	G	Sox2_MA0143.3	14	0	+	0	0	.
chr7	47119564	47119565	chr7:47119565:C:T	rs73097079	C	T	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr7	47139763	47139764	chr7:47139764:A:T	rs1583674	A	T	A	Sox2_MA0143.3	16	0	-	0	0	.
chr7	47150534	47150535	chr7:47150535:C:T	rs114554187	C	T	C	Sox2_MA0143.3	-20	0	-	0	0	.
chr7	47236896	47236897	chr7:47236897:A:G	rs10269069	A	G	A	Sox2_MA0143.3	-17	0	+	0	0	.
chr7	47265724	47265725	chr7:47265725:T:C	rs11766408	T	C	T	Sox2_MA0143.3	-18	0	-	0	0	.
chr7	47333554	47333555	chr7:47333555:C:G	rs10225497	C	G	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr7	47402175	47402176	chr7:47402176:G:T	rs989709491	G	T	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr7	47404176	47404177	chr7:47404177:G:A	rs560867765	G	A	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr7	47405859	47405860	chr7:47405860:A:C	rs747306400	A	C	A	Sox2_MA0143.3	12	0	+	0	0	.
chr7	47405860	47405861	chr7:47405861:G:C	rs193070546	G	C	G	Sox2_MA0143.3	13	0	+	0	0	.
chr7	47509294	47509295	chr7:47509295:T:C	rs12668436	T	C	T	Sox2_MA0143.3	4	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr7	47514278	47514279	chr7:47514279:T:C	rs144404960	T	C	T	Sox2_MA0143.3	19	0	+	0	0	.
chr7	47527628	47527629	chr7:47527629:T:C	rs334527	T	C	T	Sox2_MA0143.3	16	0	-	0	0	.
chr7	47538714	47538715	chr7:47538715:A:T	rs530041670	A	T	A	Sox2_MA0143.3	-19	0	-	0	0	.
chr7	47541486	47541487	chr7:47541487:T:C	rs61226863	T	C	C	Sox2_MA0143.3	16	0	-	0	0	.
chr7	47584059	47584060	chr7:47584060:G:A	rs62446524	G	A	G	Sox2_MA0143.3	13	0	+	0	0	.
chr7	47666276	47666277	chr7:47666277:C:T	rs192453121	C	T	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr7	47669439	47669440	chr7:47669440:C:G	rs56031910	C	G	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr7	47688804	47688805	chr7:47688805:C:T	rs756673914	C	T	C	Sox2_MA0143.3	9	0	-	0	0	.
chr7	47688916	47688917	chr7:47688917:T:C	rs11760321	T	C	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr7	47688933	47688934	chr7:47688934:G:A	rs11770388	G	A	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr7	47689592	47689593	chr7:47689593:G:A	rs4720606	G	A	G	Sox2_MA0143.3	11	0	+	0	0	.
chr7	47691821	47691822	chr7:47691822:T:C	rs6943179	T	C	T	Sox2_MA0143.3	16	0	-	0	0	.
chr7	47693385	47693386	chr7:47693386:T:C	rs111708021	T	C	T	Sox2_MA0143.3	-14	0	+	0	0	.
chr7	47721388	47721389	chr7:47721389:A:C	rs79339703	A	C	A	Sox2_MA0143.3	11	0	+	0	0	.
chr7	47725138	47725139	chr7:47725139:T:G	rs6959690	T	G	T	Sox2_MA0143.3	2	1	-	9.019595766176417	2.900948058900136	CCATTGTC
chr7	47725158	47725159	chr7:47725159:C:T	rs6977529	C	T	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr7	47763111	47763112	chr7:47763112:A:G	rs6953893	A	G	G	Sox2_MA0143.3	-12	0	+	0	0	.
chr7	47763914	47763915	chr7:47763915:T:C	rs4724635	T	C	t	Sox2_MA0143.3	-1	0	-	0	0	.
chr7	47772966	47772967	chr7:47772967:C:T	rs1530948	C	T	T	Sox2_MA0143.3	19	0	-	0	0	.
chr7	47776423	47776424	chr7:47776424:T:C	rs73101483	T	C	T	Sox2_MA0143.3	24	0	+	0	0	.
chr7	47866768	47866769	chr7:47866769:C:T	rs6972918	C	T	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr7	47874138	47874139	chr7:47874139:A:G	rs73105163	A	G	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr7	47888591	47888592	chr7:47888592:T:C	rs76606157	T	C	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr7	47890678	47890679	chr7:47890679:A:T	rs11975405	A	T	A	Sox2_MA0143.3	27	0	+	0	0	.
chr7	47915451	47915452	chr7:47915452:A:G	rs146750610	A	G	A	Sox2_MA0143.3	-9	0	-	0	0	.
chr7	47969068	47969069	chr7:47969069:A:G	rs3176582	A	G	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr7	48016622	48016623	chr7:48016623:T:C	rs77955651	T	C	T	Sox2_MA0143.3	-18	0	-	0	0	.
chr7	48035641	48035642	chr7:48035642:C:T	rs779179715	C	T	C	Sox2_MA0143.3	17	0	-	0	0	.
chr7	48047045	48047046	chr7:48047046:T:C	rs2708887	T	C	t	Sox2_MA0143.3	23	0	-	0	0	.
chr7	48161564	48161565	chr7:48161565:A:G	rs62447155	A	G	a	Sox2_MA0143.3	-10	0	+	0	0	.
chr7	48161600	48161601	chr7:48161601:A:G	rs62447156	A	G	a	Sox2_MA0143.3	26	0	+	0	0	.
chr7	48202311	48202312	chr7:48202312:A:G	rs13228112	A	G	a	Sox2_MA0143.3	4	1	-	8.864090315184848	1.9553355358696274	CCTTTGTG
chr7	48223534	48223535	chr7:48223535:T:C	rs12537136	T	C	T	Sox2_MA0143.3	22	0	+	0	0	.
chr7	48410499	48410500	chr7:48410500:C:T	rs62447267	C	T	C	Sox2_MA0143.3	23	0	+	0	0	.
chr7	48506192	48506193	chr7:48506193:T:C	rs12669930	T	C	C	Sox2_MA0143.3	-12	0	-	0	0	.
chr7	48565382	48565383	chr7:48565383:T:G	rs4917163	T	G	G	Sox2_MA0143.3	-3	0	-	0	0	.
chr7	48767541	48767542	chr7:48767542:A:T	rs12669631	A	T	A	Sox2_MA0143.3	26	0	-	0	0	.
chr7	48781996	48781997	chr7:48781997:C:T	rs150920569	C	T	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr7	49027679	49027680	chr7:49027680:C:A	rs9969372	C	A	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr7	49231212	49231213	chr7:49231213:C:T	rs12537451	C	T	C	Sox2_MA0143.3	22	0	+	0	0	.
chr7	49283022	49283023	chr7:49283023:T:G	rs10269883	T	G	T	Sox2_MA0143.3	2	1	-	9.019595766176417	2.900948058900136	CCATTGTC
chr7	49518401	49518402	chr7:49518402:G:A	rs11185570	G	A	g	Sox2_MA0143.3	-16	0	+	0	0	.
chr7	49575735	49575736	chr7:49575736:G:A	rs10265687	G	A	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr7	49983743	49983744	chr7:49983744:T:C	rs76627053	T	C	T	Sox2_MA0143.3	-20	0	+	0	0	.
chr7	50265185	50265186	chr7:50265186:T:A	rs74465132	T	A	T	Sox2_MA0143.3	21	0	+	0	0	.
chr7	50308970	50308971	chr7:50308971:T:G	chr7:50308971:T:G	T	G	T	Sox2_MA0143.3	18	0	+	0	0	.
chr7	50315989	50315990	chr7:50315990:T:C	rs34243680	T	C	T	Sox2_MA0143.3	11	0	+	0	0	.
chr7	50373108	50373109	chr7:50373109:T:C	rs114171948	T	C	T	Sox2_MA0143.3	-13	0	+	0	0	.
chr7	50379301	50379302	chr7:50379302:G:T	rs143983024	G	T	G	Sox2_MA0143.3	5	1	+	9.613475778572903	2.7047209992576837	CCATTGTT
chr7	50408410	50408411	chr7:50408411:G:A	rs7789158	G	A	G	Sox2_MA0143.3	1	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr7	50414691	50414692	chr7:50414692:T:C	rs73695643	T	C	T	Sox2_MA0143.3	-16	0	-	0	0	.
chr7	50446641	50446642	chr7:50446642:G:A	rs35929700	G	A	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr7	50450693	50450694	chr7:50450694:C:T	rs935795	C	T	c	Sox2_MA0143.3	18	0	-	0	0	.
chr7	50473855	50473856	chr7:50473856:G:C	rs17634771	G	C	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr7	50502988	50502989	chr7:50502989:C:T	rs11575381	C	T	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr7	50522649	50522650	chr7:50522650:A:G	rs78069522	A	G	A	Sox2_MA0143.3	-20	0	-	0	0	.
chr7	50531870	50531871	chr7:50531871:C:A	rs73123254	C	A	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr7	50585187	50585188	chr7:50585188:G:A	rs79457348	G	A	G	Sox2_MA0143.3	13	0	-	0	0	.
chr7	50625669	50625670	chr7:50625670:G:A	rs2715139	G	A	A	Sox2_MA0143.3	-18	0	-	0	0	.
chr7	50629487	50629488	chr7:50629488:T:C	rs2190497	T	C	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr7	50648785	50648786	chr7:50648786:A:G	rs3819428	A	G	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr7	50648786	50648787	chr7:50648787:G:A	rs2529421	G	A	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr7	50653048	50653049	chr7:50653049:G:A	rs115738588	G	A	G	Sox2_MA0143.3	0	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr7	50657985	50657986	chr7:50657986:A:G	rs145825145	A	G	A	Sox2_MA0143.3	-20	0	+	0	0	.
chr7	50657987	50657988	chr7:50657988:A:G	rs956117	A	G	A	Sox2_MA0143.3	-18	0	+	0	0	.
chr7	50676655	50676656	chr7:50676656:G:C	rs2237475	G	C	G	Sox2_MA0143.3	15	0	+	0	0	.
chr7	50697830	50697831	chr7:50697831:C:A	rs2299157	C	A	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr7	50747356	50747357	chr7:50747357:C:T	rs17152120	C	T	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr7	50800118	50800119	chr7:50800119:T:C	rs12718930	T	C	T	Sox2_MA0143.3	15	0	-	0	0	.
chr7	50802931	50802932	chr7:50802932:C:T	rs11238339	C	T	T	Sox2_MA0143.3	-3	0	-	0	0	.
chr7	50852239	50852240	chr7:50852240:T:C	rs1862947	T	C	t	Sox2_MA0143.3	-4	0	-	0	0	.
chr7	50953923	50953924	chr7:50953924:A:G	rs116990255	A	G	A	Sox2_MA0143.3	-5	0	+	0	0	.
chr7	51006742	51006743	chr7:51006743:G:A	rs17725940	G	A	G	Sox2_MA0143.3	-9	0	+	0	0	.
chr7	51036025	51036026	chr7:51036026:G:A	rs541176261	G	A	G	Sox2_MA0143.3	-12	0	+	0	0	.
chr7	51079946	51079947	chr7:51079947:T:C	rs12719028	T	C	T	Sox2_MA0143.3	17	0	+	0	0	.
chr7	51080982	51080983	chr7:51080983:T:C	rs150217277	T	C	T	Sox2_MA0143.3	27	0	-	0	0	.
chr7	51081010	51081011	chr7:51081011:G:A	rs75759786	G	A	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr7	51181706	51181707	chr7:51181707:C:T	rs73697824	C	T	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr7	51250813	51250814	chr7:51250814:C:T	rs74938549	C	T	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr7	51251436	51251437	chr7:51251437:A:C	rs140204770	A	C	A	Sox2_MA0143.3	-8	0	-	0	0	.
chr7	51256164	51256165	chr7:51256165:C:T	rs1337193675	C	T	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr7	51256165	51256166	chr7:51256166:G:A	rs117085207	G	A	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr7	51318681	51318682	chr7:51318682:C:T	rs73120062	C	T	c	Sox2_MA0143.3	-7	0	+	0	0	.
chr7	51375242	51375243	chr7:51375243:A:G	rs674774	A	G	g	Sox2_MA0143.3	24	0	+	0	0	.
chr7	51454474	51454475	chr7:51454475:C:T	rs58412578	C	T	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr7	51483084	51483085	chr7:51483085:A:C	rs73119326	A	C	A	Sox2_MA0143.3	4	1	-	8.864090315184848	1.9553355358696274	CCTTTGTG
chr7	51485303	51485304	chr7:51485304:T:C	rs13226029	T	C	C	Sox2_MA0143.3	-20	0	-	0	0	.
chr7	51766688	51766689	chr7:51766689:C:T	rs589288	C	T	C	Sox2_MA0143.3	9	0	-	0	0	.
chr7	51803106	51803107	chr7:51803107:C:T	rs117672282	C	T	C	Sox2_MA0143.3	19	0	+	0	0	.
chr7	52119553	52119554	chr7:52119554:G:T	chr7:52119554:G:T	G	T	G	Sox2_MA0143.3	21	0	+	0	0	.
chr7	52150167	52150168	chr7:52150168:T:G	rs59184903	T	G	T	Sox2_MA0143.3	-16	0	+	0	0	.
chr7	52274611	52274612	chr7:52274612:G:A	rs544811231	G	A	G	Sox2_MA0143.3	25	0	-	0	0	.
chr7	52302486	52302487	chr7:52302487:A:T	rs12667576	A	T	.	Sox2_MA0143.3	21	0	-	0	0	.
chr7	52410341	52410342	chr7:52410342:A:T	rs983613	A	T	T	Sox2_MA0143.3	-15	0	+	0	0	.
chr7	52480159	52480160	chr7:52480160:C:G	rs61382359	C	G	C	Sox2_MA0143.3	10	0	+	0	0	.
chr7	52726917	52726918	chr7:52726918:T:C	rs1528995	T	C	T	Sox2_MA0143.3	-5	0	+	0	0	.
chr7	52928207	52928208	chr7:52928208:C:T	rs12718724	C	T	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr7	53040496	53040497	chr7:53040497:A:G	rs13232128	A	G	A	Sox2_MA0143.3	-11	0	-	0	0	.
chr7	53050215	53050216	chr7:53050216:G:T	rs1826529	G	T	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr7	53325164	53325165	chr7:53325165:A:T	rs58002092	A	T	A	Sox2_MA0143.3	-14	0	-	0	0	.
chr7	53611403	53611404	chr7:53611404:G:C	rs17135897	G	C	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr7	54034405	54034406	chr7:54034406:A:G	rs6962215	A	G	A	Sox2_MA0143.3	-16	0	+	0	0	.
chr7	54112280	54112281	chr7:54112281:G:A	rs80221736	G	A	G	Sox2_MA0143.3	21	0	-	0	0	.
chr7	54112297	54112298	chr7:54112298:A:G	rs17172298	A	G	G	Sox2_MA0143.3	4	1	-	8.864090315184848	1.9553355358696274	CCTTTGTG
chr7	54169696	54169697	chr7:54169697:T:C	rs10257809	T	C	c	Sox2_MA0143.3	13	0	+	0	0	.
chr7	54169698	54169699	chr7:54169699:G:A	rs10268093	G	A	g	Sox2_MA0143.3	15	0	+	0	0	.
chr7	54251169	54251170	chr7:54251170:T:C	rs6960882	T	C	C	Sox2_MA0143.3	27	0	+	0	0	.
chr7	54254558	54254559	chr7:54254559:T:C	rs10275022	T	C	T	Sox2_MA0143.3	-7	0	-	0	0	.
chr7	54360600	54360601	chr7:54360601:A:G	rs17561729	A	G	A	Sox2_MA0143.3	11	0	+	0	0	.
chr7	54505743	54505744	chr7:54505744:A:G	rs598532	A	G	a	Sox2_MA0143.3	11	0	+	0	0	.
chr7	54546451	54546452	chr7:54546452:G:A	rs1235058	G	A	G	Sox2_MA0143.3	20	0	-	0	0	.
chr7	54638004	54638005	chr7:54638005:C:T	rs13242670	C	T	T	Sox2_MA0143.3	-9	0	-	0	0	.
chr7	54643511	54643512	chr7:54643512:G:A	rs632398	G	A	g	Sox2_MA0143.3	-19	0	+	0	0	.
chr7	54645029	54645030	chr7:54645030:A:G	rs479121	A	G	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr7	54658571	54658572	chr7:54658572:G:A	rs62452901	G	A	G	Sox2_MA0143.3	25	0	+	0	0	.
chr7	54661140	54661141	chr7:54661141:A:G	rs41326245	A	G	A	Sox2_MA0143.3	-14	0	-	0	0	.
chr7	54675344	54675345	chr7:54675345:C:T	rs7805167	C	T	C	Sox2_MA0143.3	0	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr7	54759729	54759730	chr7:54759730:T:G	rs77843499	T	G	T	Sox2_MA0143.3	3	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr7	54791723	54791724	chr7:54791724:C:A	rs1113443	C	A	A	Sox2_MA0143.3	-1	0	+	0	0	.
chr7	54810461	54810462	chr7:54810462:A:G	rs1919827	A	G	A	Sox2_MA0143.3	4	1	-	9.800647049772198	2.8918922704569785	CCTTTGTT
chr7	54831999	54832000	chr7:54832000:G:A	rs13236849	G	A	G	Sox2_MA0143.3	8	0	-	0	0	.
chr7	54842592	54842593	chr7:54842593:G:T	rs542162093	G	T	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr7	54858472	54858473	chr7:54858473:A:G	rs11238330	A	G	A	Sox2_MA0143.3	10	0	-	0	0	.
chr7	54933778	54933779	chr7:54933779:A:T	rs12056195	A	T	A	Sox2_MA0143.3	2	1	-	9.206767037375712	9.019595766176417	CCTTTGTC
chr7	54960780	54960781	chr7:54960781:C:G	rs11975082	C	G	G	Sox2_MA0143.3	5	1	-	8.676919043985553	1.7681642646703324	CCATTGTG
chr7	55055820	55055821	chr7:55055821:C:A	chr7:55055821:C:A	C	A	C	Sox2_MA0143.3	10	0	+	0	0	.
chr7	55063665	55063666	chr7:55063666:G:A	rs17335898	G	A	G	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr7	55067779	55067780	chr7:55067780:C:T	rs1468724	C	T	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr7	55124923	55124924	chr7:55124924:C:T	rs10235245	C	T	c	Sox2_MA0143.3	-13	0	+	0	0	.
chr7	55128026	55128027	chr7:55128027:G:T	rs17151952	G	T	G	Sox2_MA0143.3	0	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr7	55166661	55166662	chr7:55166662:G:A	rs55678943	G	A	-	Sox2_MA0143.3	23	0	-	0	0	.
chr7	55166870	55166871	chr7:55166871:T:C	rs111724965	T	C	-	Sox2_MA0143.3	-4	0	-	0	0	.
chr7	55167484	55167485	chr7:55167485:C:T	rs112329512	C	T	-	Sox2_MA0143.3	19	0	-	0	0	.
chr7	55167651	55167652	chr7:55167652:C:T	rs73137522	C	T	T	Sox2_MA0143.3	-7	0	-	0	0	.
chr7	55177953	55177954	chr7:55177954:T:C	rs9642393	T	C	T	Sox2_MA0143.3	4	1	+	8.676919043985553	1.7681642646703322	CCATTGTG
chr7	55183899	55183900	chr7:55183900:A:G	rs13222385	A	G	A	Sox2_MA0143.3	18	0	-	0	0	.
chr7	55206390	55206391	chr7:55206391:T:C	rs884225	T	C	T	Sox2_MA0143.3	24	0	+	0	0	.
chr7	55417104	55417105	chr7:55417105:G:A	rs2877283	G	A	G	Sox2_MA0143.3	23	0	+	0	0	.
chr7	55434578	55434579	chr7:55434579:C:T	rs12673895	C	T	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr7	55435615	55435616	chr7:55435616:A:G	rs712822	A	G	A	Sox2_MA0143.3	-7	0	+	0	0	.
chr7	55566039	55566040	chr7:55566040:T:C	rs73141729	T	C	T	Sox2_MA0143.3	16	0	-	0	0	.
chr7	55568929	55568930	chr7:55568930:C:T	rs73141740	C	T	C	Sox2_MA0143.3	10	0	-	0	0	.
chr7	55568935	55568936	chr7:55568936:A:G	rs10230195	A	G	A	Sox2_MA0143.3	4	1	-	9.800647049772198	2.8918922704569785	CCTTTGTT
chr7	55568942	55568943	chr7:55568943:T:G	rs78360685	T	G	T	Sox2_MA0143.3	-3	0	-	0	0	.
chr7	55571954	55571955	chr7:55571955:A:G	rs934567018	A	G	A	Sox2_MA0143.3	24	0	-	0	0	.
chr7	55571973	55571974	chr7:55571974:C:T	rs573462588	C	T	C	Sox2_MA0143.3	5	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr7	55662120	55662121	chr7:55662121:A:C	rs4440579	A	C	.	Sox2_MA0143.3	21	0	-	0	0	.
chr7	55869194	55869195	chr7:55869195:T:G	rs6970504	T	G	-	Sox2_MA0143.3	14	0	+	0	0	.
chr7	55887662	55887663	chr7:55887663:C:G	rs560007393	C	G	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr7	55887675	55887676	chr7:55887676:C:G	rs539438506	C	G	C	Sox2_MA0143.3	10	0	+	0	0	.
chr7	55912958	55912959	chr7:55912959:C:T	rs111375108	C	T	C	Sox2_MA0143.3	24	0	-	0	0	.
chr7	55912981	55912982	chr7:55912982:G:A	rs112003817	G	A	G	Sox2_MA0143.3	1	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr7	55970257	55970258	chr7:55970258:T:C	rs35160834	T	C	C	Sox2_MA0143.3	4	1	+	9.800647049772198	2.8918922704569785	CCTTTGTT
chr7	56091707	56091708	chr7:56091708:A:C	rs1039543263	A	C	A	Sox2_MA0143.3	-14	0	-	0	0	.
chr7	56211387	56211388	chr7:56211388:T:C	rs11978413	T	C	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr7	56227095	56227096	chr7:56227096:T:C	rs11238399	T	C	T	Sox2_MA0143.3	-5	0	-	0	0	.
chr7	56262315	56262316	chr7:56262316:T:C	rs76251563	T	C	T	Sox2_MA0143.3	-4	0	-	0	0	.
chr7	56373473	56373474	chr7:56373474:A:G	rs1272458091	A	G	-	Sox2_MA0143.3	4	1	-	3.5547341015215945	-3.3540206777936254	CCTTTGTA
chr7	56475016	56475017	chr7:56475017:C:T	rs142202235	C	T	N	Sox2_MA0143.3	23	0	-	0	0	.
chr7	56941031	56941032	chr7:56941032:A:G	rs62460960	A	G	A	Sox2_MA0143.3	-2	0	-	0	0	.
chr7	57240537	57240538	chr7:57240538:C:T	rs73120362	C	T	c	Sox2_MA0143.3	5	1	-	9.019595766176417	2.110840986861197	CCATTGTC
chr7	57240543	57240544	chr7:57240544:A:G	rs73120364	A	G	a	Sox2_MA0143.3	-1	0	-	0	0	.
chr7	57330994	57330995	chr7:57330995:A:G	rs1916773	A	G	a	Sox2_MA0143.3	2	1	+	9.613475778572903	3.494828071296623	CCATTGTT
chr7	57468523	57468524	chr7:57468524:C:T	rs10215781	C	T	T	Sox2_MA0143.3	24	0	-	0	0	.
chr7	57639444	57639445	chr7:57639445:C:T	rs4870684	C	T	.	Sox2_MA0143.3	-16	0	+	0	0	.
chr7	57769545	57769546	chr7:57769546:C:G	rs34382824	C	G	.	Sox2_MA0143.3	-19	0	+	0	0	.
chr7	57926830	57926831	chr7:57926831:G:A	rs9801052	G	A	.	Sox2_MA0143.3	-16	0	+	0	0	.
chr7	57994463	57994464	chr7:57994464:C:T	rs199831522	C	T	.	Sox2_MA0143.3	0	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr7	59034415	59034416	chr7:59034416:G:A	rs1222507197	G	A	.	Sox2_MA0143.3	-14	0	+	0	0	.
chr7	59034430	59034431	chr7:59034431:C:T	chr7:59034431:C:T	C	T	.	Sox2_MA0143.3	1	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr7	61691699	61691700	chr7:61691700:G:A	rs183864629	G	A	.	Sox2_MA0143.3	20	0	+	0	0	.
chr7	62388096	62388097	chr7:62388097:C:G	rs1302893643	C	G	c	Sox2_MA0143.3	-8	0	-	0	0	.
chr7	62949275	62949276	chr7:62949276:C:T	rs7293611	C	T	.	Sox2_MA0143.3	-11	0	+	0	0	.
chr7	63208653	63208654	chr7:63208654:C:T	rs73699225	C	T	-	Sox2_MA0143.3	-9	0	-	0	0	.
chr7	63208654	63208655	chr7:63208655:C:G	rs73699226	C	G	-	Sox2_MA0143.3	-10	0	-	0	0	.
chr7	63901313	63901314	chr7:63901314:C:G	rs758816995	C	G	C	Sox2_MA0143.3	27	0	+	0	0	.
chr7	63927047	63927048	chr7:63927048:C:T	rs75922475	C	T	C	Sox2_MA0143.3	16	0	+	0	0	.
chr7	63927974	63927975	chr7:63927975:A:G	rs1877650	A	G	A	Sox2_MA0143.3	-18	0	-	0	0	.
chr7	64193253	64193254	chr7:64193254:T:C	rs76215310	T	C	C	Sox2_MA0143.3	21	0	-	0	0	.
chr7	64242373	64242374	chr7:64242374:G:A	rs10276465	G	A	-	Sox2_MA0143.3	-4	0	+	0	0	.
chr7	64301047	64301048	chr7:64301048:G:A	rs72503364	G	A	G	Sox2_MA0143.3	27	0	-	0	0	.
chr7	64313117	64313118	chr7:64313118:G:A	rs597904	G	A	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr7	64313979	64313980	chr7:64313980:G:T	rs147835206	G	T	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr7	64313983	64313984	chr7:64313984:C:T	rs936204942	C	T	C	Sox2_MA0143.3	0	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr7	64313991	64313992	chr7:64313992:T:G	rs78822250	T	G	T	Sox2_MA0143.3	8	0	+	0	0	.
chr7	64452982	64452983	chr7:64452983:A:T	rs10224870	A	T	T	Sox2_MA0143.3	-10	0	-	0	0	.
chr7	64463850	64463851	chr7:64463851:G:A	chr7:64463851:G:A	G	A	G	Sox2_MA0143.3	-12	0	+	0	0	.
chr7	64551660	64551661	chr7:64551661:C:T	rs73130775	C	T	T	Sox2_MA0143.3	-14	0	+	0	0	.
chr7	64563058	64563059	chr7:64563059:A:G	rs6965883	A	G	A	Sox2_MA0143.3	17	0	-	0	0	.
chr7	64563063	64563064	chr7:64563064:C:G	rs368439982	C	G	C	Sox2_MA0143.3	12	0	-	0	0	.
chr7	64581879	64581880	chr7:64581880:A:G	rs73134705	A	G	a	Sox2_MA0143.3	-10	0	-	0	0	.
chr7	64599451	64599452	chr7:64599452:C:T	rs62462864	C	T	c	Sox2_MA0143.3	-8	0	+	0	0	.
chr7	64643765	64643766	chr7:64643766:T:C	rs114889709	T	C	t	Sox2_MA0143.3	-10	0	+	0	0	.
chr7	64666121	64666122	chr7:64666122:G:A	rs6460173	G	A	g	Sox2_MA0143.3	-12	0	+	0	0	.
chr7	64666140	64666141	chr7:64666141:C:T	rs62461721	C	T	c	Sox2_MA0143.3	7	1	+	9.206767037375712	9.800647049772198	CCTTTGTC
chr7	64666157	64666158	chr7:64666158:G:C	rs6460174	G	C	g	Sox2_MA0143.3	24	0	+	0	0	.
chr7	64882019	64882020	chr7:64882020:T:C	rs4718154	T	C	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr7	64885128	64885129	chr7:64885129:C:T	rs7797427	C	T	T	Sox2_MA0143.3	12	0	+	0	0	.
chr7	64887067	64887068	chr7:64887068:G:A	rs6460205	G	A	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr7	64890918	64890919	chr7:64890919:A:G	rs201780695	A	G	A	Sox2_MA0143.3	-11	0	+	0	0	.
chr7	64903252	64903253	chr7:64903253:C:T	rs545109735	C	T	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr7	64903285	64903286	chr7:64903286:G:T	rs114378904	G	T	G	Sox2_MA0143.3	18	0	+	0	0	.
chr7	64903289	64903290	chr7:64903290:C:G	rs549269235	C	G	c	Sox2_MA0143.3	22	0	+	0	0	.
chr7	65033420	65033421	chr7:65033421:C:T	rs138133725	C	T	.	Sox2_MA0143.3	1	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr7	65262966	65262967	chr7:65262967:G:A	rs17710097	G	A	G	Sox2_MA0143.3	10	0	+	0	0	.
chr7	65269369	65269370	chr7:65269370:C:T	rs575036357	C	T	G	Sox2_MA0143.3	-3	0	+	0	0	.
chr7	65269389	65269390	chr7:65269390:G:T	rs113268950	G	T	G	Sox2_MA0143.3	17	0	+	0	0	.
chr7	65307958	65307959	chr7:65307959:A:C	chr7:65307959:A:C	A	C	A	Sox2_MA0143.3	-10	0	-	0	0	.
chr7	65309281	65309282	chr7:65309282:C:G	rs664771	C	G	G	Sox2_MA0143.3	-3	0	+	0	0	.
chr7	65309282	65309283	chr7:65309283:G:C	rs664772	G	C	G	Sox2_MA0143.3	-2	0	+	0	0	.
chr7	65398478	65398479	chr7:65398479:C:T	rs10265083	C	T	c	Sox2_MA0143.3	18	0	-	0	0	.
chr7	65404289	65404290	chr7:65404290:A:G	rs57801522	A	G	-	Sox2_MA0143.3	-8	0	-	0	0	.
chr7	65442158	65442159	chr7:65442159:A:T	rs62470525	A	T	N	Sox2_MA0143.3	17	0	+	0	0	.
chr7	65477771	65477772	chr7:65477772:T:C	rs117143698	T	C	.	Sox2_MA0143.3	3	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr7	65814517	65814518	chr7:65814518:T:C	rs10249741	T	C	.	Sox2_MA0143.3	-11	0	-	0	0	.
chr7	65825415	65825416	chr7:65825416:G:T	rs3885839	G	T	.	Sox2_MA0143.3	7	1	+	8.676919043985553	9.613475778572903	CCATTGTG
chr7	65938536	65938537	chr7:65938537:C:T	rs143716001	C	T	.	Sox2_MA0143.3	0	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr7	65972786	65972787	chr7:65972787:C:T	rs12540589	C	T	.	Sox2_MA0143.3	10	0	-	0	0	.
chr7	66257818	66257819	chr7:66257819:A:G	rs79884518	A	G	A	Sox2_MA0143.3	-16	0	+	0	0	.
chr7	66283831	66283832	chr7:66283832:T:C	chr7:66283832:T:C	T	C	T	Sox2_MA0143.3	-11	0	+	0	0	.
chr7	66301572	66301573	chr7:66301573:C:T	rs76931296	C	T	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr7	66301573	66301574	chr7:66301574:A:G	rs10250544	A	G	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr7	66520644	66520645	chr7:66520645:C:T	rs141207178	C	T	c	Sox2_MA0143.3	18	0	+	0	0	.
chr7	66557719	66557720	chr7:66557720:C:A	rs182793788	C	A	c	Sox2_MA0143.3	21	0	-	0	0	.
chr7	66595420	66595421	chr7:66595421:G:A	rs6460305	G	A	.	Sox2_MA0143.3	15	0	-	0	0	.
chr7	66636227	66636228	chr7:66636228:C:T	rs149284284	C	T	.	Sox2_MA0143.3	-6	0	+	0	0	.
chr7	66636228	66636229	chr7:66636229:G:A	rs115563883	G	A	.	Sox2_MA0143.3	-5	0	+	0	0	.
chr7	67121840	67121841	chr7:67121841:T:C	rs58723885	T	C	T	Sox2_MA0143.3	-7	0	+	0	0	.
chr7	67328328	67328329	chr7:67328329:C:T	rs11772331	C	T	.	Sox2_MA0143.3	-2	0	-	0	0	.
chr7	67380251	67380252	chr7:67380252:G:T	rs4718544	G	T	N	Sox2_MA0143.3	-15	0	+	0	0	.
chr7	67380255	67380256	chr7:67380256:A:G	rs4718545	A	G	a	Sox2_MA0143.3	-11	0	+	0	0	.
chr7	67393116	67393117	chr7:67393117:C:G	rs4717381	C	G	c	Sox2_MA0143.3	5	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr7	67433435	67433436	chr7:67433436:C:T	rs76878375	C	T	c	Sox2_MA0143.3	22	0	+	0	0	.
chr7	67746858	67746859	chr7:67746859:A:G	rs6947636	A	G	G	Sox2_MA0143.3	13	0	-	0	0	.
chr7	67814168	67814169	chr7:67814169:A:G	rs11771775	A	G	A	Sox2_MA0143.3	-18	0	-	0	0	.
chr7	67858955	67858956	chr7:67858956:G:A	rs2864464	G	A	G	Sox2_MA0143.3	9	0	+	0	0	.
chr7	67990932	67990933	chr7:67990933:C:T	rs34427036	C	T	C	Sox2_MA0143.3	17	0	+	0	0	.
chr7	67990941	67990942	chr7:67990942:G:A	rs75017955	G	A	G	Sox2_MA0143.3	26	0	+	0	0	.
chr7	68060809	68060810	chr7:68060810:G:A	rs34921289	G	A	G	Sox2_MA0143.3	1	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr7	68124642	68124643	chr7:68124643:G:T	rs56057360	G	T	G	Sox2_MA0143.3	25	0	-	0	0	.
chr7	68224041	68224042	chr7:68224042:T:G	rs118086698	T	G	T	Sox2_MA0143.3	24	0	-	0	0	.
chr7	68244515	68244516	chr7:68244516:A:G	rs10271580	A	G	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr7	68246243	68246244	chr7:68246244:C:T	rs141665947	C	T	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr7	68310022	68310023	chr7:68310023:G:A	rs73134466	G	A	G	Sox2_MA0143.3	12	0	+	0	0	.
chr7	68349743	68349744	chr7:68349744:T:A	rs7794971	T	A	T	Sox2_MA0143.3	26	0	-	0	0	.
chr7	68433431	68433432	chr7:68433432:T:C	rs13243750	T	C	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr7	68486051	68486052	chr7:68486052:T:C	rs4718760	T	C	C	Sox2_MA0143.3	22	0	+	0	0	.
chr7	68722357	68722358	chr7:68722358:G:A	rs6950498	G	A	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr7	68922202	68922203	chr7:68922203:G:A	rs62458522	G	A	G	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr7	68922220	68922221	chr7:68922221:C:A	rs78727935	C	A	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr7	68922724	68922725	chr7:68922725:C:T	rs11971946	C	T	C	Sox2_MA0143.3	12	0	+	0	0	.
chr7	68964547	68964548	chr7:68964548:T:G	rs75327120	T	G	T	Sox2_MA0143.3	-8	0	+	0	0	.
chr7	68964575	68964576	chr7:68964576:T:C	rs6969978	T	C	C	Sox2_MA0143.3	20	0	+	0	0	.
chr7	69055596	69055597	chr7:69055597:C:A	rs2869743	C	A	A	Sox2_MA0143.3	-20	0	+	0	0	.
chr7	69055603	69055604	chr7:69055604:T:C	rs2869742	T	C	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr7	69110385	69110386	chr7:69110386:G:A	rs6974025	G	A	G	Sox2_MA0143.3	22	0	-	0	0	.
chr7	69231345	69231346	chr7:69231346:C:G	rs11769000	C	G	C	Sox2_MA0143.3	14	0	+	0	0	.
chr7	69245712	69245713	chr7:69245713:G:C	rs76133389	G	C	G	Sox2_MA0143.3	25	0	+	0	0	.
chr7	69273084	69273085	chr7:69273085:T:C	rs1879873	T	C	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr7	69363292	69363293	chr7:69363293:G:A	rs78684263	G	A	g	Sox2_MA0143.3	-16	0	+	0	0	.
chr7	69482949	69482950	chr7:69482950:C:T	rs115499337	C	T	C	Sox2_MA0143.3	12	0	+	0	0	.
chr7	69536755	69536756	chr7:69536756:A:T	rs41860	A	T	a	Sox2_MA0143.3	16	0	-	0	0	.
chr7	69610237	69610238	chr7:69610238:A:C	rs534185870	A	C	A	Sox2_MA0143.3	-9	0	-	0	0	.
chr7	69705135	69705136	chr7:69705136:G:A	rs504004	G	A	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr7	69968144	69968145	chr7:69968145:T:A	rs79764872	T	A	T	Sox2_MA0143.3	-1	0	-	0	0	.
chr7	70267605	70267606	chr7:70267606:G:A	rs6975814	G	A	a	Sox2_MA0143.3	0	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr7	70572310	70572311	chr7:70572311:C:T	rs80089041	C	T	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr7	70649876	70649877	chr7:70649877:T:C	rs17141928	T	C	T	Sox2_MA0143.3	16	0	-	0	0	.
chr7	70695241	70695242	chr7:70695242:C:T	chr7:70695242:C:T	C	T	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr7	70751535	70751536	chr7:70751536:A:G	rs6957531	A	G	A	Sox2_MA0143.3	18	0	+	0	0	.
chr7	70758206	70758207	chr7:70758207:T:C	rs2178044	T	C	T	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr7	70850080	70850081	chr7:70850081:C:G	rs6968021	C	G	C	Sox2_MA0143.3	7	1	+	9.206767037375712	8.864090315184848	CCTTTGTC
chr7	70861488	70861489	chr7:70861489:A:G	rs1997226	A	G	G	Sox2_MA0143.3	25	0	+	0	0	.
chr7	70903807	70903808	chr7:70903808:T:G	rs1997220	T	G	T	Sox2_MA0143.3	-2	0	+	0	0	.
chr7	70903818	70903819	chr7:70903819:G:A	rs2866951	G	A	G	Sox2_MA0143.3	9	0	+	0	0	.
chr7	70904031	70904032	chr7:70904032:C:T	rs1997221	C	T	C	Sox2_MA0143.3	1	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr7	71031524	71031525	chr7:71031525:A:G	rs13246023	A	G	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr7	71132262	71132263	chr7:71132263:G:A	rs62459618	G	A	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr7	71153901	71153902	chr7:71153902:T:C	rs6460641	T	C	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr7	71208921	71208922	chr7:71208922:G:A	rs17592881	G	A	G	Sox2_MA0143.3	5	1	+	9.206767037375712	2.298012258060492	CCTTTGTC
chr7	71240467	71240468	chr7:71240468:C:T	rs6974582	C	T	T	Sox2_MA0143.3	-20	0	+	0	0	.
chr7	71245204	71245205	chr7:71245205:C:T	rs534643098	C	T	C	Sox2_MA0143.3	13	0	+	0	0	.
chr7	71277262	71277263	chr7:71277263:C:T	rs2867407	C	T	C	Sox2_MA0143.3	26	0	-	0	0	.
chr7	71277285	71277286	chr7:71277286:A:G	rs73176095	A	G	A	Sox2_MA0143.3	3	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr7	71322322	71322323	chr7:71322323:A:G	rs2091792	A	G	G	Sox2_MA0143.3	12	0	+	0	0	.
chr7	71393691	71393692	chr7:71393692:G:A	rs2906259	G	A	A	Sox2_MA0143.3	-20	0	+	0	0	.
chr7	71601940	71601941	chr7:71601941:C:T	rs10237977	C	T	C	Sox2_MA0143.3	8	0	+	0	0	.
chr7	71633901	71633902	chr7:71633902:C:T	rs78947082	C	T	C	Sox2_MA0143.3	20	0	-	0	0	.
chr7	71754394	71754395	chr7:71754395:A:G	rs10240970	A	G	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr7	71812158	71812159	chr7:71812159:G:A	rs35577469	G	A	G	Sox2_MA0143.3	26	0	-	0	0	.
chr7	71874757	71874758	chr7:71874758:G:A	rs67293403	G	A	G	Sox2_MA0143.3	9	0	-	0	0	.
chr7	71874777	71874778	chr7:71874778:G:A	rs67473470	G	A	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr7	71939861	71939862	chr7:71939862:A:G	rs6460697	A	G	A	Sox2_MA0143.3	16	0	-	0	0	.
chr7	71958726	71958727	chr7:71958727:A:T	rs6944962	A	T	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr7	72027028	72027029	chr7:72027029:T:A	rs1558028	T	A	A	Sox2_MA0143.3	20	0	-	0	0	.
chr7	72079135	72079136	chr7:72079136:C:T	rs10216301	C	T	C	Sox2_MA0143.3	14	0	-	0	0	.
chr7	72262935	72262936	chr7:72262936:C:A	rs548405	C	A	A	Sox2_MA0143.3	9	0	-	0	0	.
chr7	72265858	72265859	chr7:72265859:C:T	rs1548423	C	T	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr7	72265869	72265870	chr7:72265870:A:T	rs12671472	A	T	A	Sox2_MA0143.3	-17	0	-	0	0	.
chr7	72310305	72310306	chr7:72310306:G:C	rs76455914	G	C	G	Sox2_MA0143.3	11	0	+	0	0	.
chr7	72343924	72343925	chr7:72343925:A:G	rs140353401	A	G	A	Sox2_MA0143.3	20	0	+	0	0	.
chr7	72366949	72366950	chr7:72366950:T:C	rs2944799	T	C	t	Sox2_MA0143.3	25	0	-	0	0	.
chr7	72437454	72437455	chr7:72437455:G:A	rs4029797	G	A	G	Sox2_MA0143.3	10	0	-	0	0	.
chr7	72810768	72810769	chr7:72810769:T:C	rs35534997	T	C	c	Sox2_MA0143.3	-2	0	-	0	0	.
chr7	73626936	73626937	chr7:73626937:A:G	rs34958022	A	G	A	Sox2_MA0143.3	12	0	-	0	0	.
chr7	73793765	73793766	chr7:73793766:C:T	rs114091482	C	T	C	Sox2_MA0143.3	20	0	-	0	0	.
chr7	73799840	73799841	chr7:73799841:C:T	rs143269717	C	T	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr7	73831188	73831189	chr7:73831189:T:C	rs8629	T	C	C	Sox2_MA0143.3	16	0	-	0	0	.
chr7	73942051	73942052	chr7:73942052:T:C	rs73705311	T	C	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr7	74068061	74068062	chr7:74068062:G:C	rs191598258	G	C	G	Sox2_MA0143.3	21	0	-	0	0	.
chr7	74068078	74068079	chr7:74068079:A:G	chr7:74068079:A:G	A	G	A	Sox2_MA0143.3	4	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr7	74094995	74094996	chr7:74094996:G:C	rs2237503	G	C	C	Sox2_MA0143.3	-5	0	-	0	0	.
chr7	74096560	74096561	chr7:74096561:G:C	rs2527839	G	C	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr7	74133744	74133745	chr7:74133745:C:T	rs550481464	C	T	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr7	74211242	74211243	chr7:74211243:G:A	rs76183995	G	A	G	Sox2_MA0143.3	17	0	-	0	0	.
chr7	74236234	74236235	chr7:74236235:C:A	rs3135695	C	A	C	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr7	74289204	74289205	chr7:74289205:C:A	rs73131320	C	A	C	Sox2_MA0143.3	5	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr7	74372180	74372181	chr7:74372181:T:C	rs567156847	T	C	T	Sox2_MA0143.3	14	0	+	0	0	.
chr7	74578673	74578674	chr7:74578674:C:A	rs184499734	C	A	C	Sox2_MA0143.3	0	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr7	74627782	74627783	chr7:74627783:T:C	chr7:74627783:T:C	T	C	T	Sox2_MA0143.3	-3	0	-	0	0	.
chr7	74648935	74648936	chr7:74648936:A:T	chr7:74648936:A:T	A	T	A	Sox2_MA0143.3	22	0	-	0	0	.
chr7	74656337	74656338	chr7:74656338:G:C	rs193022232	G	C	G	Sox2_MA0143.3	23	0	-	0	0	.
chr7	74869565	74869566	chr7:74869566:C:T	rs187110526	C	T	.	Sox2_MA0143.3	18	0	+	0	0	.
chr7	75073503	75073504	chr7:75073504:C:T	rs112849947	C	T	C	Sox2_MA0143.3	7	1	-	8.864090315184848	3.5547341015215945	CCTTTGTG
chr7	75458577	75458578	chr7:75458578:G:T	rs7790883	G	T	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr7	75466110	75466111	chr7:75466111:G:C	rs34048280	G	C	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr7	75486566	75486567	chr7:75486567:T:G	rs749784164	T	G	T	Sox2_MA0143.3	25	0	+	0	0	.
chr7	75592171	75592172	chr7:75592172:G:A	rs41281108	G	A	g	Sox2_MA0143.3	-4	0	-	0	0	.
chr7	75666547	75666548	chr7:75666548:G:T	rs1569115	G	T	g	Sox2_MA0143.3	-15	0	-	0	0	.
chr7	75688868	75688869	chr7:75688869:C:T	rs114129062	C	T	c	Sox2_MA0143.3	-20	0	+	0	0	.
chr7	75730057	75730058	chr7:75730058:G:A	rs113310077	G	A	G	Sox2_MA0143.3	25	0	+	0	0	.
chr7	75741827	75741828	chr7:75741828:T:C	rs67999259	T	C	t	Sox2_MA0143.3	22	0	+	0	0	.
chr7	75823602	75823603	chr7:75823603:T:C	rs147798273	T	C	t	Sox2_MA0143.3	3	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr7	75827808	75827809	chr7:75827809:G:A	rs62477650	G	A	G	Sox2_MA0143.3	1	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr7	75829999	75830000	chr7:75830000:G:A	rs112075810	G	A	G	Sox2_MA0143.3	21	0	-	0	0	.
chr7	75833758	75833759	chr7:75833759:G:T	rs34361210	G	T	G	Sox2_MA0143.3	14	0	+	0	0	.
chr7	75888950	75888951	chr7:75888951:G:A	rs117927502	G	A	G	Sox2_MA0143.3	7	1	+	8.864090315184848	3.5547341015215945	CCTTTGTG
chr7	75906039	75906040	chr7:75906040:C:T	rs572175099	C	T	C	Sox2_MA0143.3	16	0	-	0	0	.
chr7	75951848	75951849	chr7:75951849:C:T	rs1355975091	C	T	C	Sox2_MA0143.3	25	0	+	0	0	.
chr7	76003890	76003891	chr7:76003891:T:C	rs2058389	T	C	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr7	76011648	76011649	chr7:76011649:G:A	rs4732524	G	A	G	Sox2_MA0143.3	15	0	+	0	0	.
chr7	76071542	76071543	chr7:76071543:C:T	rs7798527	C	T	C	Sox2_MA0143.3	23	0	-	0	0	.
chr7	76073896	76073897	chr7:76073897:T:C	rs78085898	T	C	T	Sox2_MA0143.3	-2	0	-	0	0	.
chr7	76162970	76162971	chr7:76162971:T:C	rs9801358	T	C	.	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr7	76202892	76202893	chr7:76202893:T:G	rs76688798	T	G	G	Sox2_MA0143.3	21	0	+	0	0	.
chr7	76314156	76314157	chr7:76314157:C:G	rs111362096	C	G	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr7	76346324	76346325	chr7:76346325:T:C	rs17149155	T	C	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr7	76354994	76354995	chr7:76354995:C:T	rs113821894	C	T	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr7	76359360	76359361	chr7:76359361:C:A	rs555490704	C	A	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr7	76374649	76374650	chr7:76374650:C:T	rs10156094	C	T	T	Sox2_MA0143.3	16	0	-	0	0	.
chr7	76509766	76509767	chr7:76509767:A:T	rs113200952	A	T	.	Sox2_MA0143.3	9	0	-	0	0	.
chr7	77200448	77200449	chr7:77200449:T:A	rs3091259	T	A	A	Sox2_MA0143.3	25	0	+	0	0	.
chr7	77239541	77239542	chr7:77239542:G:A	rs17804328	G	A	G	Sox2_MA0143.3	-16	0	-	0	0	.
chr7	77309828	77309829	chr7:77309829:T:C	rs73703319	T	C	T	Sox2_MA0143.3	18	0	-	0	0	.
chr7	77338246	77338247	chr7:77338247:C:T	rs79384911	C	T	C	Sox2_MA0143.3	26	0	-	0	0	.
chr7	77360860	77360861	chr7:77360861:C:G	rs4727366	C	G	G	Sox2_MA0143.3	16	0	+	0	0	.
chr7	77430298	77430299	chr7:77430299:T:C	rs12704962	T	C	T	Sox2_MA0143.3	19	0	-	0	0	.
chr7	77528472	77528473	chr7:77528473:T:C	rs79061270	T	C	T	Sox2_MA0143.3	-11	0	+	0	0	.
chr7	77533401	77533402	chr7:77533402:A:G	rs1044671344	A	G	-	Sox2_MA0143.3	24	0	+	0	0	.
chr7	77537603	77537604	chr7:77537604:C:T	rs768437437	C	T	C	Sox2_MA0143.3	13	0	-	0	0	.
chr7	77537634	77537635	chr7:77537635:G:A	rs138381153	G	A	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr7	77663753	77663754	chr7:77663754:A:G	rs4727454	A	G	A	Sox2_MA0143.3	-6	0	-	0	0	.
chr7	77759227	77759228	chr7:77759228:C:A	rs115631072	C	A	C	Sox2_MA0143.3	17	0	+	0	0	.
chr7	77967478	77967479	chr7:77967479:T:C	rs6971524	T	C	T	Sox2_MA0143.3	21	0	+	0	0	.
chr7	78026581	78026582	chr7:78026582:A:C	rs2471599	A	C	C	Sox2_MA0143.3	4	1	-	8.864090315184848	1.9553355358696274	CCTTTGTG
chr7	78055579	78055580	chr7:78055580:C:T	rs3779323	C	T	T	Sox2_MA0143.3	-17	0	-	0	0	.
chr7	78090844	78090845	chr7:78090845:T:G	rs73362682	T	G	T	Sox2_MA0143.3	2	1	+	9.800647049772198	3.494828071296623	CCTTTGTT
chr7	78172752	78172753	chr7:78172753:A:C	rs3807676	A	C	A	Sox2_MA0143.3	-16	0	+	0	0	.
chr7	78329325	78329326	chr7:78329326:T:G	rs7803917	T	G	T	Sox2_MA0143.3	-19	0	-	0	0	.
chr7	78388670	78388671	chr7:78388671:G:A	rs12540636	G	A	A	Sox2_MA0143.3	18	0	-	0	0	.
chr7	78393263	78393264	chr7:78393264:A:C	rs881446	A	C	A	Sox2_MA0143.3	-17	0	-	0	0	.
chr7	78467338	78467339	chr7:78467339:C:T	rs2192883	C	T	C	Sox2_MA0143.3	15	0	+	0	0	.
chr7	78474079	78474080	chr7:78474080:G:A	rs73372341	G	A	G	Sox2_MA0143.3	27	0	-	0	0	.
chr7	78498440	78498441	chr7:78498441:T:A	rs4730332	T	A	A	Sox2_MA0143.3	21	0	-	0	0	.
chr7	78578975	78578976	chr7:78578976:A:C	rs6949355	A	C	C	Sox2_MA0143.3	15	0	+	0	0	.
chr7	78604392	78604393	chr7:78604393:C:T	rs62468655	C	T	T	Sox2_MA0143.3	-18	0	+	0	0	.
chr7	78607825	78607826	chr7:78607826:T:C	rs140942454	T	C	T	Sox2_MA0143.3	3	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr7	78769183	78769184	chr7:78769184:G:T	rs1207864	G	T	T	Sox2_MA0143.3	-9	0	-	0	0	.
chr7	78930532	78930533	chr7:78930533:T:G	rs72612604	T	G	T	Sox2_MA0143.3	12	0	-	0	0	.
chr7	78930537	78930538	chr7:78930538:A:G	rs61151798	A	G	G	Sox2_MA0143.3	7	1	-	9.800647049772198	9.206767037375712	CCTTTGTT
chr7	79288818	79288819	chr7:79288819:A:T	rs111658036	A	T	A	Sox2_MA0143.3	-9	0	+	0	0	.
chr7	79337988	79337989	chr7:79337989:C:T	rs7793442	C	T	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr7	79711234	79711235	chr7:79711235:G:T	rs10281458	G	T	T	Sox2_MA0143.3	-4	0	+	0	0	.
chr7	79722141	79722142	chr7:79722142:A:C	rs2465517	A	C	C	Sox2_MA0143.3	24	0	-	0	0	.
chr7	79725021	79725022	chr7:79725022:T:C	rs1012491356	T	C	T	Sox2_MA0143.3	18	0	+	0	0	.
chr7	79820593	79820594	chr7:79820594:C:T	rs74984194	C	T	T	Sox2_MA0143.3	27	0	-	0	0	.
chr7	80019642	80019643	chr7:80019643:T:C	rs57112658	T	C	T	Sox2_MA0143.3	24	0	+	0	0	.
chr7	80240752	80240753	chr7:80240753:T:G	rs17153641	T	G	T	Sox2_MA0143.3	-13	0	+	0	0	.
chr7	80280121	80280122	chr7:80280122:A:G	rs12666091	A	G	A	Sox2_MA0143.3	-3	0	-	0	0	.
chr7	80292844	80292845	chr7:80292845:A:T	rs13224358	A	T	-	Sox2_MA0143.3	-9	0	-	0	0	.
chr7	80442472	80442473	chr7:80442473:C:T	rs799959	C	T	T	Sox2_MA0143.3	-13	0	-	0	0	.
chr7	80489441	80489442	chr7:80489442:A:C	rs59419187	A	C	A	Sox2_MA0143.3	-3	0	+	0	0	.
chr7	80495956	80495957	chr7:80495957:T:G	rs10270318	T	G	T	Sox2_MA0143.3	3	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr7	80496713	80496714	chr7:80496714:C:G	rs113016841	C	G	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr7	80545456	80545457	chr7:80545457:T:C	rs1851934	T	C	T	Sox2_MA0143.3	-17	0	-	0	0	.
chr7	80581898	80581899	chr7:80581899:C:G	rs945095	C	G	C	Sox2_MA0143.3	25	0	-	0	0	.
chr7	80604585	80604586	chr7:80604586:A:G	rs755628826	A	G	A	Sox2_MA0143.3	19	0	+	0	0	.
chr7	80655250	80655251	chr7:80655251:C:T	rs79176612	C	T	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr7	80675295	80675296	chr7:80675296:A:G	rs3211960	A	G	A	Sox2_MA0143.3	-8	0	-	0	0	.
chr7	80748449	80748450	chr7:80748450:A:C	rs3823476	A	C	A	Sox2_MA0143.3	-5	0	-	0	0	.
chr7	80748568	80748569	chr7:80748569:A:T	rs34383594	A	T	A	Sox2_MA0143.3	2	1	-	8.864090315184848	8.676919043985553	CCTTTGTG
chr7	80825618	80825619	chr7:80825619:T:C	rs12155128	T	C	T	Sox2_MA0143.3	14	0	-	0	0	.
chr7	80834170	80834171	chr7:80834171:C:A	rs765469495	C	A	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr7	80842218	80842219	chr7:80842219:T:C	rs4731861	T	C	C	Sox2_MA0143.3	16	0	-	0	0	.
chr7	80858751	80858752	chr7:80858752:G:A	rs10954378	G	A	A	Sox2_MA0143.3	-14	0	+	0	0	.
chr7	80918258	80918259	chr7:80918259:T:C	rs143835534	T	C	T	Sox2_MA0143.3	24	0	+	0	0	.
chr7	81162751	81162752	chr7:81162752:A:G	rs73384500	A	G	A	Sox2_MA0143.3	-9	0	+	0	0	.
chr7	81181191	81181192	chr7:81181192:G:T	rs11768454	G	T	G	Sox2_MA0143.3	-12	0	+	0	0	.
chr7	81182243	81182244	chr7:81182244:A:G	rs7788722	A	G	g	Sox2_MA0143.3	-15	0	-	0	0	.
chr7	81575447	81575448	chr7:81575448:T:C	rs79401188	T	C	T	Sox2_MA0143.3	-10	0	-	0	0	.
chr7	81664585	81664586	chr7:81664586:C:T	rs1401027625	C	T	C	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr7	81970548	81970549	chr7:81970549:A:G	rs140571364	A	G	A	Sox2_MA0143.3	3	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr7	82131401	82131402	chr7:82131402:C:T	rs258700	C	T	T	Sox2_MA0143.3	-10	0	+	0	0	.
chr7	82151734	82151735	chr7:82151735:G:T	rs3801740	G	T	T	Sox2_MA0143.3	9	0	-	0	0	.
chr7	82313530	82313531	chr7:82313531:T:C	rs10274741	T	C	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr7	82335639	82335640	chr7:82335640:T:C	rs56004232	T	C	T	Sox2_MA0143.3	14	0	-	0	0	.
chr7	82335654	82335655	chr7:82335655:C:T	rs3801698	C	T	T	Sox2_MA0143.3	-1	0	-	0	0	.
chr7	82404314	82404315	chr7:82404315:C:G	rs78570211	C	G	C	Sox2_MA0143.3	25	0	-	0	0	.
chr7	82413473	82413474	chr7:82413474:C:T	rs80345873	C	T	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr7	82642194	82642195	chr7:82642195:A:G	rs59457491	A	G	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr7	82723634	82723635	chr7:82723635:G:T	rs558060676	G	T	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr7	83303352	83303353	chr7:83303353:C:A	rs2522332	C	A	C	Sox2_MA0143.3	23	0	+	0	0	.
chr7	83547513	83547514	chr7:83547514:C:T	rs2159598	C	T	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr7	83550483	83550484	chr7:83550484:C:T	rs1639303	C	T	C	Sox2_MA0143.3	1	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr7	83550487	83550488	chr7:83550488:G:A	rs1693385	G	A	G	Sox2_MA0143.3	5	1	+	9.613475778572903	2.7047209992576837	CCATTGTT
chr7	83586194	83586195	chr7:83586195:C:A	rs73380756	C	A	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr7	83641489	83641490	chr7:83641490:T:C	rs17457412	T	C	T	Sox2_MA0143.3	-14	0	+	0	0	.
chr7	83697336	83697337	chr7:83697337:C:T	rs172538	C	T	T	Sox2_MA0143.3	14	0	+	0	0	.
chr7	84017937	84017938	chr7:84017938:T:C	rs56156921	T	C	C	Sox2_MA0143.3	14	0	+	0	0	.
chr7	84136496	84136497	chr7:84136497:T:C	rs10257628	T	C	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr7	84369436	84369437	chr7:84369437:C:T	rs1228862	C	T	T	Sox2_MA0143.3	-17	0	-	0	0	.
chr7	84387962	84387963	chr7:84387963:C:G	rs1228877	C	G	G	Sox2_MA0143.3	10	0	-	0	0	.
chr7	84491095	84491096	chr7:84491096:T:C	rs2527544	T	C	T	Sox2_MA0143.3	26	0	-	0	0	.
chr7	84530115	84530116	chr7:84530116:A:T	rs17231124	A	T	A	Sox2_MA0143.3	-15	0	-	0	0	.
chr7	84783781	84783782	chr7:84783782:C:T	rs10280487	C	T	C	Sox2_MA0143.3	26	0	-	0	0	.
chr7	84811633	84811634	chr7:84811634:G:A	rs73712875	G	A	G	Sox2_MA0143.3	1	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr7	84823248	84823249	chr7:84823249:G:A	rs1820961	G	A	A	Sox2_MA0143.3	-20	0	+	0	0	.
chr7	85644537	85644538	chr7:85644538:T:C	rs10256465	T	C	T	Sox2_MA0143.3	14	0	-	0	0	.
chr7	85808854	85808855	chr7:85808855:G:A	rs72612675	G	A	G	Sox2_MA0143.3	-16	0	-	0	0	.
chr7	86325409	86325410	chr7:86325410:T:C	rs760602850	T	C	T	Sox2_MA0143.3	-5	0	-	0	0	.
chr7	86642977	86642978	chr7:86642978:C:T	rs166677	C	T	C	Sox2_MA0143.3	-20	0	-	0	0	.
chr7	86747474	86747475	chr7:86747475:A:C	rs10274631	A	C	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr7	86749579	86749580	chr7:86749580:A:C	rs2237554	A	C	T	Sox2_MA0143.3	6	1	-	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr7	86965062	86965063	chr7:86965063:G:A	rs6976741	G	A	A	Sox2_MA0143.3	15	0	+	0	0	.
chr7	87056638	87056639	chr7:87056639:A:C	rs78161728	A	C	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr7	87129583	87129584	chr7:87129584:G:C	rs73203002	G	C	C	Sox2_MA0143.3	5	1	+	9.613475778572903	2.7047209992576837	CCATTGTT
chr7	87185467	87185468	chr7:87185468:G:A	rs4728686	G	A	A	Sox2_MA0143.3	-20	0	-	0	0	.
chr7	87331143	87331144	chr7:87331144:C:T	rs802051	C	T	C	Sox2_MA0143.3	27	0	+	0	0	.
chr7	87475133	87475134	chr7:87475134:A:G	rs151095285	A	G	A	Sox2_MA0143.3	4	1	-	8.864090315184848	1.9553355358696274	CCTTTGTG
chr7	87475271	87475272	chr7:87475272:C:G	rs45619531	C	G	C	Sox2_MA0143.3	11	0	-	0	0	.
chr7	87514261	87514262	chr7:87514262:A:G	rs187990611	A	G	A	Sox2_MA0143.3	-9	0	+	0	0	.
chr7	87587500	87587501	chr7:87587501:G:T	rs17327624	G	T	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr7	87627969	87627970	chr7:87627970:G:A	rs1341420944	G	A	g	Sox2_MA0143.3	27	0	+	0	0	.
chr7	87816432	87816433	chr7:87816433:G:T	rs10235853	G	T	G	Sox2_MA0143.3	27	0	+	0	0	.
chr7	87968164	87968165	chr7:87968165:G:C	rs1688902	G	C	C	Sox2_MA0143.3	14	0	-	0	0	.
chr7	88033628	88033629	chr7:88033629:T:A	rs2097917	T	A	T	Sox2_MA0143.3	14	0	+	0	0	.
chr7	88071559	88071560	chr7:88071560:G:A	rs12670301	G	A	A	Sox2_MA0143.3	15	0	+	0	0	.
chr7	88298076	88298077	chr7:88298077:G:C	rs10263111	G	C	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr7	88523867	88523868	chr7:88523868:G:A	rs141420755	G	A	G	Sox2_MA0143.3	24	0	+	0	0	.
chr7	88668755	88668756	chr7:88668756:C:G	rs2080152	C	G	G	Sox2_MA0143.3	5	1	-	9.613475778572903	2.7047209992576837	CCATTGTT
chr7	88792214	88792215	chr7:88792215:A:T	rs116268498	A	T	A	Sox2_MA0143.3	26	0	-	0	0	.
chr7	88805498	88805499	chr7:88805499:G:A	rs11526260	G	A	A	Sox2_MA0143.3	22	0	+	0	0	.
chr7	88883440	88883441	chr7:88883441:A:G	rs57212675	A	G	A	Sox2_MA0143.3	3	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr7	89105879	89105880	chr7:89105880:G:T	chr7:89105880:G:T	G	T	G	Sox2_MA0143.3	23	0	+	0	0	.
chr7	89183672	89183673	chr7:89183673:A:G	rs2189054	A	G	A	Sox2_MA0143.3	26	0	-	0	0	.
chr7	89189483	89189484	chr7:89189484:A:T	rs2097740	A	T	A	Sox2_MA0143.3	10	0	+	0	0	.
chr7	89397883	89397884	chr7:89397884:A:G	rs7789782	A	G	A	Sox2_MA0143.3	-8	0	+	0	0	.
chr7	89466291	89466292	chr7:89466292:G:C	rs62469427	G	C	C	Sox2_MA0143.3	5	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr7	89478465	89478466	chr7:89478466:C:G	rs423	C	G	C	Sox2_MA0143.3	15	0	+	0	0	.
chr7	89500165	89500166	chr7:89500166:G:A	rs7799124	G	A	A	Sox2_MA0143.3	-16	0	-	0	0	.
chr7	89681418	89681419	chr7:89681419:A:C	rs10275974	A	C	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr7	89831168	89831169	chr7:89831169:C:T	rs1029415	C	T	T	Sox2_MA0143.3	-7	0	-	0	0	.
chr7	89839177	89839178	chr7:89839178:A:G	rs6954335	A	G	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr7	89845428	89845429	chr7:89845429:T:C	rs10215711	T	C	T	Sox2_MA0143.3	17	0	-	0	0	.
chr7	89965974	89965975	chr7:89965975:C:G	rs66991545	C	G	C	Sox2_MA0143.3	21	0	-	0	0	.
chr7	90133993	90133994	chr7:90133994:G:A	rs7809315	G	A	G	Sox2_MA0143.3	8	0	-	0	0	.
chr7	90210658	90210659	chr7:90210659:A:G	rs194501	A	G	G	Sox2_MA0143.3	6	1	-	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr7	90298301	90298302	chr7:90298302:T:C	rs2040515	T	C	T	Sox2_MA0143.3	8	0	+	0	0	.
chr7	90453983	90453984	chr7:90453984:C:T	rs177691	C	T	T	Sox2_MA0143.3	-3	0	-	0	0	.
chr7	90453989	90453990	chr7:90453990:T:C	rs12667265	T	C	T	Sox2_MA0143.3	-9	0	-	0	0	.
chr7	90659758	90659759	chr7:90659759:G:A	rs1858766	G	A	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr7	90677808	90677809	chr7:90677809:T:G	rs73218713	T	G	T	Sox2_MA0143.3	11	0	+	0	0	.
chr7	90720457	90720458	chr7:90720458:A:G	rs60854166	A	G	A	Sox2_MA0143.3	16	0	+	0	0	.
chr7	90721525	90721526	chr7:90721526:C:T	rs79031698	C	T	C	Sox2_MA0143.3	17	0	+	0	0	.
chr7	90932964	90932965	chr7:90932965:C:T	rs7789683	C	T	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr7	90952180	90952181	chr7:90952181:G:C	rs573338259	G	C	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr7	91135853	91135854	chr7:91135854:C:T	rs77488108	C	T	C	Sox2_MA0143.3	14	0	+	0	0	.
chr7	91136008	91136009	chr7:91136009:G:C	rs1567473	G	C	G	Sox2_MA0143.3	22	0	+	0	0	.
chr7	91138103	91138104	chr7:91138104:T:G	rs73213015	T	G	T	Sox2_MA0143.3	20	0	+	0	0	.
chr7	91280708	91280709	chr7:91280709:G:A	rs10281519	G	A	A	Sox2_MA0143.3	18	0	+	0	0	.
chr7	91289785	91289786	chr7:91289786:T:C	rs112323242	T	C	T	Sox2_MA0143.3	26	0	+	0	0	.
chr7	91632806	91632807	chr7:91632807:T:C	rs6963107	T	C	T	Sox2_MA0143.3	-19	0	-	0	0	.
chr7	91910402	91910403	chr7:91910403:C:T	rs7781767	C	T	C	Sox2_MA0143.3	27	0	+	0	0	.
chr7	91942230	91942231	chr7:91942231:G:T	rs73403710	G	T	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr7	92276494	92276495	chr7:92276495:G:C	rs12056285	G	C	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr7	92468214	92468215	chr7:92468215:G:A	rs10262461	G	A	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr7	92475543	92475544	chr7:92475544:G:A	rs11763017	G	A	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr7	92586433	92586434	chr7:92586434:G:T	rs79270659	G	T	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr7	92598683	92598684	chr7:92598684:T:G	rs187132986	T	G	T	Sox2_MA0143.3	19	0	-	0	0	.
chr7	92642328	92642329	chr7:92642329:A:G	chr7:92642329:A:G	A	G	A	Sox2_MA0143.3	26	0	+	0	0	.
chr7	92650048	92650049	chr7:92650049:T:C	rs2282983	T	C	C	Sox2_MA0143.3	14	0	+	0	0	.
chr7	92695888	92695889	chr7:92695889:C:T	chr7:92695889:C:T	C	T	C	Sox2_MA0143.3	7	1	-	8.864090315184848	3.5547341015215945	CCTTTGTG
chr7	92718135	92718136	chr7:92718136:C:T	rs142260266	C	T	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr7	92875269	92875270	chr7:92875270:A:T	rs78723443	A	T	A	Sox2_MA0143.3	19	0	+	0	0	.
chr7	92917421	92917422	chr7:92917422:C:A	rs958267007	C	A	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr7	92987653	92987654	chr7:92987654:C:T	rs17699960	C	T	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr7	93016690	93016691	chr7:93016691:T:C	rs79310815	T	C	T	Sox2_MA0143.3	20	0	-	0	0	.
chr7	93016718	93016719	chr7:93016719:G:A	rs7806426	G	A	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr7	93029845	93029846	chr7:93029846:C:T	rs2188177	C	T	C	Sox2_MA0143.3	1	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr7	93055819	93055820	chr7:93055820:A:C	rs74586223	A	C	A	Sox2_MA0143.3	-20	0	+	0	0	.
chr7	93055830	93055831	chr7:93055831:G:T	rs725080	G	T	G	Sox2_MA0143.3	-9	0	+	0	0	.
chr7	93147385	93147386	chr7:93147386:G:T	rs42499	G	T	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr7	93923188	93923189	chr7:93923189:A:G	rs7785521	A	G	A	Sox2_MA0143.3	3	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr7	93924028	93924029	chr7:93924029:A:G	rs180236	A	G	A	Sox2_MA0143.3	20	0	-	0	0	.
chr7	94088908	94088909	chr7:94088909:C:T	rs77098527	C	T	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr7	94122212	94122213	chr7:94122213:C:T	rs28669349	C	T	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr7	94241523	94241524	chr7:94241524:G:A	rs80050457	G	A	G	Sox2_MA0143.3	20	0	-	0	0	.
chr7	94276968	94276969	chr7:94276969:T:C	rs2215869	T	C	T	Sox2_MA0143.3	24	0	-	0	0	.
chr7	94368607	94368608	chr7:94368608:T:C	rs140653168	T	C	T	Sox2_MA0143.3	14	0	-	0	0	.
chr7	94368907	94368908	chr7:94368908:A:G	rs10487253	A	G	A	Sox2_MA0143.3	-20	0	-	0	0	.
chr7	94404487	94404488	chr7:94404488:A:G	rs406226	A	G	A	Sox2_MA0143.3	-19	0	-	0	0	.
chr7	94432182	94432183	chr7:94432183:T:C	rs34305852	T	C	T	Sox2_MA0143.3	17	0	+	0	0	.
chr7	94510404	94510405	chr7:94510405:G:T	rs76297315	G	T	G	Sox2_MA0143.3	20	0	-	0	0	.
chr7	94510429	94510430	chr7:94510430:T:G	chr7:94510430:T:G	T	G	T	Sox2_MA0143.3	-5	0	-	0	0	.
chr7	94580619	94580620	chr7:94580620:T:G	rs17400379	T	G	T	Sox2_MA0143.3	-18	0	+	0	0	.
chr7	94710541	94710542	chr7:94710542:C:T	rs17166459	C	T	C	Sox2_MA0143.3	25	0	-	0	0	.
chr7	94908232	94908233	chr7:94908233:T:G	rs527705534	T	G	T	Sox2_MA0143.3	-20	0	-	0	0	.
chr7	95096089	95096090	chr7:95096090:A:T	rs143543027	A	T	A	Sox2_MA0143.3	18	0	+	0	0	.
chr7	95101628	95101629	chr7:95101629:G:C	rs78821240	G	C	G	Sox2_MA0143.3	0	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr7	95130087	95130088	chr7:95130088:G:A	chr7:95130088:G:A	G	A	-	Sox2_MA0143.3	0	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr7	95303803	95303804	chr7:95303804:C:T	rs964384409	C	T	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr7	95473785	95473786	chr7:95473786:T:C	rs43062	T	C	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr7	95513100	95513101	chr7:95513101:C:A	rs73235071	C	A	C	Sox2_MA0143.3	1	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr7	95812138	95812139	chr7:95812139:T:C	rs17167184	T	C	T	Sox2_MA0143.3	-14	0	+	0	0	.
chr7	95812173	95812174	chr7:95812174:G:A	rs144057213	G	A	G	Sox2_MA0143.3	21	0	+	0	0	.
chr7	95863796	95863797	chr7:95863797:C:T	rs1488504	C	T	T	Sox2_MA0143.3	14	0	+	0	0	.
chr7	95867484	95867485	chr7:95867485:G:T	rs17167196	G	T	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr7	95875229	95875230	chr7:95875230:C:A	rs3857801	C	A	C	Sox2_MA0143.3	-20	0	-	0	0	.
chr7	95886750	95886751	chr7:95886751:G:A	rs111428422	G	A	G	Sox2_MA0143.3	1	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr7	95897579	95897580	chr7:95897580:G:A	rs78831396	G	A	G	Sox2_MA0143.3	16	0	+	0	0	.
chr7	96061129	96061130	chr7:96061130:G:A	rs79993991	G	A	A	Sox2_MA0143.3	-18	0	-	0	0	.
chr7	96074985	96074986	chr7:96074986:A:G	rs73232556	A	G	A	Sox2_MA0143.3	25	0	+	0	0	.
chr7	96157911	96157912	chr7:96157912:C:G	rs4729239	C	G	C	Sox2_MA0143.3	12	0	-	0	0	.
chr7	96415093	96415094	chr7:96415094:G:A	rs1859278	G	A	A	Sox2_MA0143.3	-8	0	+	0	0	.
chr7	96533650	96533651	chr7:96533651:T:C	rs7776846	T	C	T	Sox2_MA0143.3	22	0	+	0	0	.
chr7	96599140	96599141	chr7:96599141:G:C	rs17495340	G	C	G	Sox2_MA0143.3	14	0	-	0	0	.
chr7	96698085	96698086	chr7:96698086:A:G	rs28730461	A	G	A	Sox2_MA0143.3	25	0	-	0	0	.
chr7	96887643	96887644	chr7:96887644:G:A	rs6972627	G	A	G	Sox2_MA0143.3	5	1	+	9.613475778572903	2.7047209992576837	CCATTGTT
chr7	96891483	96891484	chr7:96891484:C:T	rs144070201	C	T	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr7	97043266	97043267	chr7:97043267:C:G	rs1207719	C	G	G	Sox2_MA0143.3	18	0	-	0	0	.
chr7	97398602	97398603	chr7:97398603:A:G	chr7:97398603:A:G	A	G	A	Sox2_MA0143.3	-9	0	+	0	0	.
chr7	97406447	97406448	chr7:97406448:G:A	rs10249854	G	A	A	Sox2_MA0143.3	-5	0	-	0	0	.
chr7	97846980	97846981	chr7:97846981:A:T	rs9641216	A	T	.	Sox2_MA0143.3	-7	0	-	0	0	.
chr7	98066262	98066263	chr7:98066263:C:T	rs11983616	C	T	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr7	98076735	98076736	chr7:98076736:G:C	rs78888921	G	C	G	Sox2_MA0143.3	16	0	+	0	0	.
chr7	98119468	98119469	chr7:98119469:C:T	chr7:98119469:C:T	C	T	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr7	98132119	98132120	chr7:98132120:A:G	rs114803676	A	G	A	Sox2_MA0143.3	3	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr7	98132131	98132132	chr7:98132132:A:G	rs377045372	A	G	A	Sox2_MA0143.3	-9	0	-	0	0	.
chr7	98274041	98274042	chr7:98274042:C:T	rs539485297	C	T	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr7	98409819	98409820	chr7:98409820:C:T	rs62478240	C	T	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr7	98570152	98570153	chr7:98570153:G:A	rs544877535	G	A	G	Sox2_MA0143.3	23	0	+	0	0	.
chr7	98644390	98644391	chr7:98644391:G:A	rs4729462	G	A	G	Sox2_MA0143.3	-5	0	+	0	0	.
chr7	98765995	98765996	chr7:98765996:G:C	rs36143868	G	C	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr7	98772138	98772139	chr7:98772139:C:T	rs989990208	C	T	C	Sox2_MA0143.3	11	0	-	0	0	.
chr7	98789395	98789396	chr7:98789396:A:G	rs1043220965	A	G	g	Sox2_MA0143.3	-5	0	+	0	0	.
chr7	98876497	98876498	chr7:98876498:G:A	rs7793915	G	A	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr7	98922889	98922890	chr7:98922890:C:T	rs574882376	C	T	c	Sox2_MA0143.3	13	0	+	0	0	.
chr7	98940186	98940187	chr7:98940187:T:C	rs149951320	T	C	t	Sox2_MA0143.3	18	0	+	0	0	.
chr7	98942315	98942316	chr7:98942316:C:G	rs2237597	C	G	C	Sox2_MA0143.3	1	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr7	98973700	98973701	chr7:98973701:G:A	rs41647	G	A	A	Sox2_MA0143.3	5	1	+	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr7	99013937	99013938	chr7:99013938:C:G	rs170185	C	G	C	Sox2_MA0143.3	17	0	+	0	0	.
chr7	99162629	99162630	chr7:99162630:G:A	rs78999965	G	A	G	Sox2_MA0143.3	0	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr7	99624755	99624756	chr7:99624756:C:T	rs73713531	C	T	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr7	99624780	99624781	chr7:99624781:A:G	rs144940221	A	G	A	Sox2_MA0143.3	22	0	+	0	0	.
chr7	99721184	99721185	chr7:99721185:C:T	rs2687144	C	T	T	Sox2_MA0143.3	-19	0	-	0	0	.
chr7	99729768	99729769	chr7:99729769:A:G	rs114096130	A	G	A	Sox2_MA0143.3	-14	0	-	0	0	.
chr7	99881180	99881181	chr7:99881181:T:C	rs2572019	T	C	T	Sox2_MA0143.3	3	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr7	99949906	99949907	chr7:99949907:G:A	rs2525541	G	A	A	Sox2_MA0143.3	15	0	-	0	0	.
chr7	99950945	99950946	chr7:99950946:A:G	rs2525542	A	G	A	Sox2_MA0143.3	-10	0	-	0	0	.
chr7	99976019	99976020	chr7:99976020:T:C	rs139838304	T	C	.	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr7	99976028	99976029	chr7:99976029:C:T	rs146937985	C	T	.	Sox2_MA0143.3	12	0	+	0	0	.
chr7	99980787	99980788	chr7:99980788:T:C	rs62484970	T	C	.	Sox2_MA0143.3	-12	0	-	0	0	.
chr7	100015583	100015584	chr7:100015584:C:T	rs181978652	C	T	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr7	100245142	100245143	chr7:100245143:G:C	rs10245781	G	C	-	Sox2_MA0143.3	-7	0	-	0	0	.
chr7	100247375	100247376	chr7:100247376:T:C	rs78156167	T	C	-	Sox2_MA0143.3	6	1	+	9.613475778572903	2.7047209992576837	CCATTGTT
chr7	100429560	100429561	chr7:100429561:C:G	rs150881124	C	G	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr7	100563036	100563037	chr7:100563037:C:T	rs191765936	C	T	C	Sox2_MA0143.3	11	0	+	0	0	.
chr7	100565491	100565492	chr7:100565492:G:A	rs78951820	G	A	G	Sox2_MA0143.3	-11	0	+	0	0	.
chr7	100690928	100690929	chr7:100690929:T:C	rs221800	T	C	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr7	100888488	100888489	chr7:100888489:C:T	rs11171	C	T	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr7	100890759	100890760	chr7:100890760:C:A	chr7:100890760:C:A	C	A	C	Sox2_MA0143.3	16	0	-	0	0	.
chr7	100932431	100932432	chr7:100932432:C:T	rs78413681	C	T	C	Sox2_MA0143.3	12	0	-	0	0	.
chr7	100975419	100975420	chr7:100975420:G:T	rs113185319	G	T	t	Sox2_MA0143.3	18	0	-	0	0	.
chr7	100984656	100984657	chr7:100984657:T:C	rs12530867	T	C	c	Sox2_MA0143.3	-14	0	+	0	0	.
chr7	101019687	101019688	chr7:101019688:G:A	rs6973913	G	A	g	Sox2_MA0143.3	18	0	-	0	0	.
chr7	101067654	101067655	chr7:101067655:G:T	rs76077856	G	T	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr7	101092229	101092230	chr7:101092230:T:C	rs71557293	T	C	T	Sox2_MA0143.3	-17	0	+	0	0	.
chr7	101116682	101116683	chr7:101116683:G:A	rs4729661	G	A	G	Sox2_MA0143.3	19	0	-	0	0	.
chr7	101120185	101120186	chr7:101120186:A:G	rs12536798	A	G	A	Sox2_MA0143.3	-4	0	-	0	0	.
chr7	101173023	101173024	chr7:101173024:T:C	rs112978090	T	C	T	Sox2_MA0143.3	-17	0	-	0	0	.
chr7	101217884	101217885	chr7:101217885:T:C	rs73185926	T	C	T	Sox2_MA0143.3	3	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr7	101239251	101239252	chr7:101239252:G:T	rs114756165	G	T	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr7	101252198	101252199	chr7:101252199:G:A	rs6942609	G	A	G	Sox2_MA0143.3	7	1	-	9.206767037375712	9.800647049772198	CCTTTGTC
chr7	101273434	101273435	chr7:101273435:A:T	rs146833407	A	T	A	Sox2_MA0143.3	-10	0	-	0	0	.
chr7	101322314	101322315	chr7:101322315:G:A	rs73180994	G	A	G	Sox2_MA0143.3	27	0	+	0	0	.
chr7	101406113	101406114	chr7:101406114:T:A	rs6977536	T	A	T	Sox2_MA0143.3	-6	0	+	0	0	.
chr7	101421746	101421747	chr7:101421747:A:G	rs13229048	A	G	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr7	101472936	101472937	chr7:101472937:T:C	rs1008064	T	C	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr7	101549996	101549997	chr7:101549997:G:T	rs74325999	G	T	.	Sox2_MA0143.3	-5	0	-	0	0	.
chr7	101601632	101601633	chr7:101601633:T:C	rs7812158	T	C	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr7	101606382	101606383	chr7:101606383:G:A	rs60324271	G	A	G	Sox2_MA0143.3	26	0	-	0	0	.
chr7	101851626	101851627	chr7:101851627:C:T	rs2970459	C	T	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr7	102065001	102065002	chr7:102065002:G:A	rs147899390	G	A	G	Sox2_MA0143.3	14	0	-	0	0	.
chr7	102098057	102098058	chr7:102098058:C:A	rs201457	C	A	C	Sox2_MA0143.3	19	0	-	0	0	.
chr7	102117898	102117899	chr7:102117899:C:T	rs1017713935	C	T	C	Sox2_MA0143.3	9	0	-	0	0	.
chr7	102132572	102132573	chr7:102132573:G:A	rs73187816	G	A	G	Sox2_MA0143.3	9	0	+	0	0	.
chr7	102138861	102138862	chr7:102138862:C:T	rs79159988	C	T	C	Sox2_MA0143.3	24	0	-	0	0	.
chr7	102254701	102254702	chr7:102254702:G:A	rs11771091	G	A	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr7	102286362	102286363	chr7:102286363:T:C	rs1273160951	T	C	T	Sox2_MA0143.3	3	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr7	102307216	102307217	chr7:102307217:G:A	rs803090	G	A	G	Sox2_MA0143.3	23	0	-	0	0	.
chr7	102388179	102388180	chr7:102388180:G:C	rs56295031	G	C	C	Sox2_MA0143.3	19	0	-	0	0	.
chr7	102449147	102449148	chr7:102449148:G:A	rs7801498	G	A	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr7	102748812	102748813	chr7:102748813:T:A	rs187269668	T	A	N	Sox2_MA0143.3	13	0	-	0	0	.
chr7	102755595	102755596	chr7:102755596:C:T	rs9690473	C	T	a	Sox2_MA0143.3	24	0	+	0	0	.
chr7	102823818	102823819	chr7:102823819:C:T	rs79931387	C	T	T	Sox2_MA0143.3	0	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr7	102823832	102823833	chr7:102823833:C:T	rs74725883	C	T	T	Sox2_MA0143.3	14	0	+	0	0	.
chr7	102860398	102860399	chr7:102860399:G:C	rs59278165	G	C	G	Sox2_MA0143.3	16	0	-	0	0	.
chr7	102913155	102913156	chr7:102913156:C:G	rs17135923	C	G	C	Sox2_MA0143.3	0	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr7	102973689	102973690	chr7:102973690:C:A	rs6465886	C	A	C	Sox2_MA0143.3	19	0	-	0	0	.
chr7	103074127	103074128	chr7:103074128:G:C	rs58939176	G	C	G	Sox2_MA0143.3	19	0	-	0	0	.
chr7	103150508	103150509	chr7:103150509:C:A	rs77144831	C	A	c	Sox2_MA0143.3	0	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr7	103151235	103151236	chr7:103151236:A:G	rs114328748	A	G	a	Sox2_MA0143.3	20	0	+	0	0	.
chr7	103203874	103203875	chr7:103203875:A:G	rs62481584	A	G	a	Sox2_MA0143.3	-19	0	-	0	0	.
chr7	103661003	103661004	chr7:103661004:T:C	rs3757739	T	C	t	Sox2_MA0143.3	15	0	-	0	0	.
chr7	103661007	103661008	chr7:103661008:T:G	rs727531	T	G	T	Sox2_MA0143.3	11	0	-	0	0	.
chr7	103668423	103668424	chr7:103668424:C:G	rs184982675	C	G	C	Sox2_MA0143.3	27	0	+	0	0	.
chr7	103681026	103681027	chr7:103681027:C:G	rs12705139	C	G	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr7	103762115	103762116	chr7:103762116:G:A	rs11974819	G	A	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr7	103812651	103812652	chr7:103812652:C:A	rs39334	C	A	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr7	103830786	103830787	chr7:103830787:G:A	rs39361	G	A	A	Sox2_MA0143.3	15	0	-	0	0	.
chr7	103870772	103870773	chr7:103870773:G:A	rs2299392	G	A	A	Sox2_MA0143.3	19	0	+	0	0	.
chr7	103981021	103981022	chr7:103981022:G:T	rs11766854	G	T	G	Sox2_MA0143.3	0	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr7	104030112	104030113	chr7:104030113:G:T	rs10228745	G	T	T	Sox2_MA0143.3	10	0	+	0	0	.
chr7	104089930	104089931	chr7:104089931:T:G	rs7796558	T	G	T	Sox2_MA0143.3	-5	0	-	0	0	.
chr7	104772439	104772440	chr7:104772440:C:G	rs57968847	C	G	G	Sox2_MA0143.3	18	0	-	0	0	.
chr7	104772441	104772442	chr7:104772442:G:A	rs137996461	G	A	G	Sox2_MA0143.3	16	0	-	0	0	.
chr7	104941062	104941063	chr7:104941063:G:A	rs2470939	G	A	g	Sox2_MA0143.3	23	0	+	0	0	.
chr7	104986242	104986243	chr7:104986243:G:A	rs888086	G	A	A	Sox2_MA0143.3	9	0	-	0	0	.
chr7	105131990	105131991	chr7:105131991:C:G	rs189931559	C	G	C	Sox2_MA0143.3	0	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr7	105136423	105136424	chr7:105136424:A:C	rs75041207	A	C	A	Sox2_MA0143.3	14	0	-	0	0	.
chr7	105185815	105185816	chr7:105185816:T:A	rs73186008	T	A	T	Sox2_MA0143.3	-4	0	+	0	0	.
chr7	105304149	105304150	chr7:105304150:G:T	rs73186064	G	T	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr7	105310114	105310115	chr7:105310115:G:A	rs74347296	G	A	G	Sox2_MA0143.3	21	0	-	0	0	.
chr7	105359197	105359198	chr7:105359198:A:G	rs139828203	A	G	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr7	105389556	105389557	chr7:105389557:T:C	rs182971039	T	C	T	Sox2_MA0143.3	-1	0	-	0	0	.
chr7	105654282	105654283	chr7:105654283:T:C	rs115325598	T	C	T	Sox2_MA0143.3	8	0	-	0	0	.
chr7	105655161	105655162	chr7:105655162:G:A	rs7806216	G	A	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr7	105849604	105849605	chr7:105849605:A:G	rs74947630	A	G	A	Sox2_MA0143.3	19	0	+	0	0	.
chr7	105887667	105887668	chr7:105887668:G:A	rs117989645	G	A	G	Sox2_MA0143.3	24	0	-	0	0	.
chr7	105933522	105933523	chr7:105933523:C:T	rs11770463	C	T	C	Sox2_MA0143.3	9	0	+	0	0	.
chr7	105996011	105996012	chr7:105996012:G:A	rs2072162	G	A	G	Sox2_MA0143.3	16	0	-	0	0	.
chr7	106024033	106024034	chr7:106024034:C:T	rs75853071	C	T	C	Sox2_MA0143.3	15	0	-	0	0	.
chr7	106031444	106031445	chr7:106031445:C:T	rs17152486	C	T	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr7	106054491	106054492	chr7:106054492:G:A	rs58963807	G	A	A	Sox2_MA0143.3	11	0	-	0	0	.
chr7	106065637	106065638	chr7:106065638:C:T	rs73414213	C	T	T	Sox2_MA0143.3	-17	0	+	0	0	.
chr7	106065864	106065865	chr7:106065865:G:A	rs78402621	G	A	G	Sox2_MA0143.3	-14	0	+	0	0	.
chr7	106069480	106069481	chr7:106069481:G:A	rs6947891	G	A	A	Sox2_MA0143.3	-19	0	+	0	0	.
chr7	106150902	106150903	chr7:106150903:T:C	rs74661371	T	C	T	Sox2_MA0143.3	-20	0	+	0	0	.
chr7	106157458	106157459	chr7:106157459:T:C	rs176526	T	C	C	Sox2_MA0143.3	19	0	-	0	0	.
chr7	106176787	106176788	chr7:106176788:T:C	rs566707362	T	C	T	Sox2_MA0143.3	-17	0	-	0	0	.
chr7	106187827	106187828	chr7:106187828:C:T	rs10248549	C	T	T	Sox2_MA0143.3	-15	0	-	0	0	.
chr7	106191327	106191328	chr7:106191328:A:G	rs6979063	A	G	G	Sox2_MA0143.3	8	0	+	0	0	.
chr7	106239020	106239021	chr7:106239021:T:G	rs17372315	T	G	T	Sox2_MA0143.3	8	0	+	0	0	.
chr7	106240951	106240952	chr7:106240952:T:C	rs4730152	T	C	C	Sox2_MA0143.3	6	1	+	9.613475778572903	2.7047209992576837	CCATTGTT
chr7	106282678	106282679	chr7:106282679:T:C	rs73720639	T	C	T	Sox2_MA0143.3	3	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr7	106290537	106290538	chr7:106290538:C:G	rs35533454	C	G	C	Sox2_MA0143.3	7	1	+	9.206767037375712	8.864090315184848	CCTTTGTC
chr7	106345497	106345498	chr7:106345498:G:A	rs6973843	G	A	G	Sox2_MA0143.3	26	0	+	0	0	.
chr7	106392848	106392849	chr7:106392849:T:C	rs10226430	T	C	C	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr7	106459603	106459604	chr7:106459604:G:C	rs111772509	G	C	G	Sox2_MA0143.3	23	0	-	0	0	.
chr7	106465244	106465245	chr7:106465245:G:A	rs1859752	G	A	G	Sox2_MA0143.3	16	0	-	0	0	.
chr7	106855854	106855855	chr7:106855855:T:C	rs79682035	T	C	T	Sox2_MA0143.3	-15	0	+	0	0	.
chr7	106869630	106869631	chr7:106869631:A:G	rs1526083	A	G	A	Sox2_MA0143.3	-16	0	+	0	0	.
chr7	106883965	106883966	chr7:106883966:T:G	rs849398	T	G	T	Sox2_MA0143.3	20	0	+	0	0	.
chr7	106968591	106968592	chr7:106968592:T:C	rs953183	T	C	T	Sox2_MA0143.3	-14	0	-	0	0	.
chr7	107091488	107091489	chr7:107091489:G:A	rs6466156	G	A	A	Sox2_MA0143.3	-7	0	-	0	0	.
chr7	107117857	107117858	chr7:107117858:A:G	rs116883339	A	G	A	Sox2_MA0143.3	25	0	+	0	0	.
chr7	107168010	107168011	chr7:107168011:A:G	rs116684701	A	G	A	Sox2_MA0143.3	23	0	+	0	0	.
chr7	107391357	107391358	chr7:107391358:A:G	rs79026644	A	G	G	Sox2_MA0143.3	-2	0	+	0	0	.
chr7	107485439	107485440	chr7:107485440:A:C	rs2712193	A	C	C	Sox2_MA0143.3	27	0	+	0	0	.
chr7	107495207	107495208	chr7:107495208:G:A	rs10464620	G	A	G	Sox2_MA0143.3	23	0	-	0	0	.
chr7	107615102	107615103	chr7:107615103:T:C	rs3801944	T	C	T	Sox2_MA0143.3	-10	0	+	0	0	.
chr7	107890757	107890758	chr7:107890758:C:T	rs34572011	C	T	C	Sox2_MA0143.3	12	0	+	0	0	.
chr7	107933061	107933062	chr7:107933062:C:G	rs113734738	C	G	T	Sox2_MA0143.3	-14	0	-	0	0	.
chr7	108001896	108001897	chr7:108001897:G:A	rs139532877	G	A	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr7	108006320	108006321	chr7:108006321:T:C	rs6943225	T	C	C	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr7	108030656	108030657	chr7:108030657:G:A	rs58442437	G	A	G	Sox2_MA0143.3	7	1	+	8.864090315184848	3.5547341015215945	CCTTTGTG
chr7	108085568	108085569	chr7:108085569:G:A	rs450722	G	A	A	Sox2_MA0143.3	16	0	+	0	0	.
chr7	108099281	108099282	chr7:108099282:A:G	rs448342	A	G	a	Sox2_MA0143.3	14	0	-	0	0	.
chr7	108246430	108246431	chr7:108246431:G:A	rs139718093	G	A	G	Sox2_MA0143.3	27	0	+	0	0	.
chr7	108468314	108468315	chr7:108468315:C:T	rs1859774	C	T	T	Sox2_MA0143.3	26	0	-	0	0	.
chr7	108468385	108468386	chr7:108468386:C:A	rs1859775	C	A	A	Sox2_MA0143.3	17	0	-	0	0	.
chr7	108570197	108570198	chr7:108570198:C:T	rs531557041	C	T	C	Sox2_MA0143.3	22	0	-	0	0	.
chr7	108670394	108670395	chr7:108670395:T:C	rs193450	T	C	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr7	108684965	108684966	chr7:108684966:C:T	rs10226016	C	T	T	Sox2_MA0143.3	-14	0	-	0	0	.
chr7	108724019	108724020	chr7:108724020:A:T	rs6948908	A	T	A	Sox2_MA0143.3	-7	0	+	0	0	.
chr7	109516980	109516981	chr7:109516981:A:G	rs10278004	A	G	G	Sox2_MA0143.3	8	0	+	0	0	.
chr7	109638519	109638520	chr7:109638520:C:T	rs7784378	C	T	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr7	109647518	109647519	chr7:109647519:T:C	rs12705623	T	C	T	Sox2_MA0143.3	-15	0	-	0	0	.
chr7	109668249	109668250	chr7:109668250:C:G	rs820932	C	G	G	Sox2_MA0143.3	26	0	-	0	0	.
chr7	109831338	109831339	chr7:109831339:T:A	chr7:109831339:T:A	T	A	T	Sox2_MA0143.3	9	0	+	0	0	.
chr7	110283127	110283128	chr7:110283128:G:C	rs17157585	G	C	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr7	110283152	110283153	chr7:110283153:C:T	rs67579037	C	T	C	Sox2_MA0143.3	21	0	+	0	0	.
chr7	110676868	110676869	chr7:110676869:T:A	rs78844832	T	A	T	Sox2_MA0143.3	-5	0	-	0	0	.
chr7	110677533	110677534	chr7:110677534:T:A	rs73207100	T	A	T	Sox2_MA0143.3	10	0	-	0	0	.
chr7	110725155	110725156	chr7:110725156:A:G	rs2030780	A	G	G	Sox2_MA0143.3	9	0	-	0	0	.
chr7	111093104	111093105	chr7:111093105:T:C	rs980362701	T	C	T	Sox2_MA0143.3	3	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr7	111719021	111719022	chr7:111719022:A:C	rs117843425	A	C	A	Sox2_MA0143.3	-3	0	-	0	0	.
chr7	111744968	111744969	chr7:111744969:T:C	rs3801786	T	C	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr7	111855388	111855389	chr7:111855389:G:A	rs75209046	G	A	G	Sox2_MA0143.3	0	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr7	112001150	112001151	chr7:112001151:C:T	rs113976378	C	T	C	Sox2_MA0143.3	-5	0	-	0	0	.
chr7	112028801	112028802	chr7:112028802:G:T	rs12673764	G	T	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr7	112132459	112132460	chr7:112132460:T:C	rs78135136	T	C	T	Sox2_MA0143.3	-7	0	-	0	0	.
chr7	112185664	112185665	chr7:112185665:C:T	rs71544730	C	T	C	Sox2_MA0143.3	24	0	-	0	0	.
chr7	112495856	112495857	chr7:112495857:G:A	rs2966493	G	A	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr7	112614501	112614502	chr7:112614502:G:A	rs43095	G	A	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr7	112622347	112622348	chr7:112622348:A:G	rs1234381	A	G	A	Sox2_MA0143.3	26	0	+	0	0	.
chr7	112995712	112995713	chr7:112995713:A:G	rs115209183	A	G	A	Sox2_MA0143.3	-7	0	-	0	0	.
chr7	113371720	113371721	chr7:113371721:C:T	rs17413351	C	T	T	Sox2_MA0143.3	1	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr7	113457010	113457011	chr7:113457011:G:A	rs12705874	G	A	G	Sox2_MA0143.3	5	1	+	9.206767037375712	2.298012258060492	CCTTTGTC
chr7	113594021	113594022	chr7:113594022:A:G	rs2964934	A	G	A	Sox2_MA0143.3	7	1	+	3.5547341015215945	8.864090315184848	CCTTTGTA
chr7	113826505	113826506	chr7:113826506:A:G	rs113352344	A	G	A	Sox2_MA0143.3	3	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr7	113956194	113956195	chr7:113956195:C:T	rs1586990	C	T	T	Sox2_MA0143.3	16	0	+	0	0	.
chr7	113956197	113956198	chr7:113956198:A:G	rs1586989	A	G	A	Sox2_MA0143.3	19	0	+	0	0	.
chr7	114223328	114223329	chr7:114223329:G:A	rs1450832	G	A	A	Sox2_MA0143.3	-7	0	-	0	0	.
chr7	114263133	114263134	chr7:114263134:G:T	rs2396721	G	T	T	Sox2_MA0143.3	17	0	+	0	0	.
chr7	114386034	114386035	chr7:114386035:G:A	rs2894697	G	A	C	Sox2_MA0143.3	15	0	-	0	0	.
chr7	115054607	115054608	chr7:115054608:T:C	rs2709480	T	C	C	Sox2_MA0143.3	3	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr7	115060972	115060973	chr7:115060973:G:T	rs13236429	G	T	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr7	115097201	115097202	chr7:115097202:A:G	rs11773678	A	G	A	Sox2_MA0143.3	14	0	+	0	0	.
chr7	115183408	115183409	chr7:115183409:C:G	rs193253416	C	G	C	Sox2_MA0143.3	8	0	-	0	0	.
chr7	115216781	115216782	chr7:115216782:C:T	rs73198010	C	T	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr7	115231330	115231331	chr7:115231331:A:G	rs10264377	A	G	A	Sox2_MA0143.3	16	0	-	0	0	.
chr7	115289875	115289876	chr7:115289876:G:A	rs2396812	G	A	A	Sox2_MA0143.3	-1	0	+	0	0	.
chr7	115492287	115492288	chr7:115492288:T:G	rs12531896	T	G	G	Sox2_MA0143.3	-3	0	-	0	0	.
chr7	115555937	115555938	chr7:115555938:G:A	rs12672066	G	A	A	Sox2_MA0143.3	-12	0	-	0	0	.
chr7	115676331	115676332	chr7:115676332:T:G	rs117573016	T	G	T	Sox2_MA0143.3	-13	0	-	0	0	.
chr7	115768740	115768741	chr7:115768741:A:G	rs183987656	A	G	A	Sox2_MA0143.3	6	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr7	115825893	115825894	chr7:115825894:A:G	rs140680029	A	G	A	Sox2_MA0143.3	-13	0	+	0	0	.
chr7	115877994	115877995	chr7:115877995:A:G	rs10279797	A	G	A	Sox2_MA0143.3	-9	0	+	0	0	.
chr7	115984270	115984271	chr7:115984271:T:C	rs77606818	T	C	T	Sox2_MA0143.3	6	1	+	8.676919043985553	1.7681642646703326	CCATTGTG
chr7	116152843	116152844	chr7:116152844:G:T	rs11770268	G	T	T	Sox2_MA0143.3	-12	0	-	0	0	.
chr7	116173260	116173261	chr7:116173261:A:C	rs76363328	A	C	A	Sox2_MA0143.3	-2	0	+	0	0	.
chr7	116173261	116173262	chr7:116173262:G:A	rs559588803	G	A	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr7	116210530	116210531	chr7:116210531:G:T	rs554040352	G	T	G	Sox2_MA0143.3	22	0	+	0	0	.
chr7	116211122	116211123	chr7:116211123:G:A	rs143664050	G	A	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr7	116218592	116218593	chr7:116218593:G:A	rs111467123	G	A	G	Sox2_MA0143.3	12	0	+	0	0	.
chr7	116236380	116236381	chr7:116236381:T:C	rs6979524	T	C	T	Sox2_MA0143.3	2	1	+	8.864090315184848	2.5582713367092715	CCTTTGTG
chr7	116288369	116288370	chr7:116288370:T:C	rs73203803	T	C	T	Sox2_MA0143.3	14	0	+	0	0	.
chr7	116308959	116308960	chr7:116308960:G:A	rs6466573	G	A	.	Sox2_MA0143.3	-10	0	-	0	0	.
chr7	116354412	116354413	chr7:116354413:G:A	rs1389671928	G	A	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr7	116357913	116357914	chr7:116357914:C:T	rs79135030	C	T	C	Sox2_MA0143.3	5	1	-	8.676919043985553	1.7681642646703324	CCATTGTG
chr7	116553394	116553395	chr7:116553395:T:C	rs186892071	T	C	T	Sox2_MA0143.3	-8	0	-	0	0	.
chr7	116558035	116558036	chr7:116558036:A:T	rs6466588	A	T	T	Sox2_MA0143.3	2	1	+	9.613475778572903	9.800647049772198	CCATTGTT
chr7	116576908	116576909	chr7:116576909:G:A	rs76706972	G	A	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr7	116614792	116614793	chr7:116614793:G:A	rs28396740	G	A	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr7	116764485	116764486	chr7:116764486:C:T	rs1054359147	C	T	C	Sox2_MA0143.3	5	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr7	116776272	116776273	chr7:116776273:C:T	rs2299440	C	T	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr7	116803019	116803020	chr7:116803020:A:T	rs41746	A	T	T	Sox2_MA0143.3	6	1	-	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr7	116835567	116835568	chr7:116835568:C:T	rs4730762	C	T	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr7	117020118	117020119	chr7:117020119:G:A	rs79789637	G	A	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr7	117114074	117114075	chr7:117114075:T:G	chr7:117114075:T:G	T	G	T	Sox2_MA0143.3	-5	0	-	0	0	.
chr7	117250831	117250832	chr7:117250832:C:T	rs38903	C	T	C	Sox2_MA0143.3	24	0	+	0	0	.
chr7	117252834	117252835	chr7:117252835:C:T	rs66547623	C	T	T	Sox2_MA0143.3	14	0	+	0	0	.
chr7	117347826	117347827	chr7:117347827:T:A	rs115270028	T	A	T	Sox2_MA0143.3	8	0	+	0	0	.
chr7	117606167	117606168	chr7:117606168:A:T	chr7:117606168:A:T	A	T	A	Sox2_MA0143.3	12	0	-	0	0	.
chr7	117619891	117619892	chr7:117619892:C:T	rs213986	C	T	T	Sox2_MA0143.3	14	0	+	0	0	.
chr7	117715454	117715455	chr7:117715455:T:C	rs7804816	T	C	C	Sox2_MA0143.3	25	0	+	0	0	.
chr7	117872948	117872949	chr7:117872949:G:A	rs551317363	G	A	G	Sox2_MA0143.3	15	0	-	0	0	.
chr7	117895223	117895224	chr7:117895224:T:C	rs6952555	T	C	T	Sox2_MA0143.3	2	1	-	8.676919043985553	2.5582713367092715	CCATTGTG
chr7	117963765	117963766	chr7:117963766:G:C	rs1013278	G	C	C	Sox2_MA0143.3	0	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr7	117963864	117963865	chr7:117963865:A:G	rs73481632	A	G	A	Sox2_MA0143.3	4	1	-	3.5547341015215945	-3.3540206777936254	CCTTTGTA
chr7	118005139	118005140	chr7:118005140:A:T	rs540189326	A	T	A	Sox2_MA0143.3	4	1	-	8.864090315184848	1.9553355358696274	CCTTTGTG
chr7	118016779	118016780	chr7:118016780:G:A	rs117366027	G	A	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr7	118075447	118075448	chr7:118075448:T:A	chr7:118075448:T:A	T	A	T	Sox2_MA0143.3	27	0	-	0	0	.
chr7	118442034	118442035	chr7:118442035:A:G	rs7780434	A	G	G	Sox2_MA0143.3	10	0	-	0	0	.
chr7	118575306	118575307	chr7:118575307:T:G	rs2214156	T	G	T	Sox2_MA0143.3	13	0	-	0	0	.
chr7	118976532	118976533	chr7:118976533:C:T	rs12531794	C	T	C	Sox2_MA0143.3	22	0	-	0	0	.
chr7	119118736	119118737	chr7:119118737:C:A	rs150230839	C	A	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr7	119178992	119178993	chr7:119178993:C:A	rs79457065	C	A	C	Sox2_MA0143.3	8	0	-	0	0	.
chr7	119378816	119378817	chr7:119378817:C:T	rs308190	C	T	C	Sox2_MA0143.3	27	0	-	0	0	.
chr7	119378862	119378863	chr7:119378863:T:G	rs35024366	T	G	T	Sox2_MA0143.3	-19	0	-	0	0	.
chr7	119569446	119569447	chr7:119569447:A:G	rs35308546	A	G	A	Sox2_MA0143.3	-13	0	+	0	0	.
chr7	119854950	119854951	chr7:119854951:A:G	rs846429	A	G	G	Sox2_MA0143.3	7	1	-	9.613475778572903	9.019595766176417	CCATTGTT
chr7	119948216	119948217	chr7:119948217:C:T	rs11766524	C	T	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr7	119964989	119964990	chr7:119964990:C:T	rs6958144	C	T	C	Sox2_MA0143.3	22	0	+	0	0	.
chr7	120674313	120674314	chr7:120674314:T:A	rs67108130	T	A	T	Sox2_MA0143.3	-14	0	+	0	0	.
chr7	120884471	120884472	chr7:120884472:A:G	rs1274910204	A	G	A	Sox2_MA0143.3	22	0	-	0	0	.
chr7	120892960	120892961	chr7:120892961:A:G	rs10257475	A	G	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr7	121062755	121062756	chr7:121062756:A:G	rs2110277	A	G	g	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr7	121138776	121138777	chr7:121138777:G:A	rs10248019	G	A	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr7	121232066	121232067	chr7:121232067:C:A	rs17357115	C	A	C	Sox2_MA0143.3	7	1	-	8.676919043985553	9.613475778572903	CCATTGTG
chr7	121434266	121434267	chr7:121434267:T:C	rs2950813	T	C	t	Sox2_MA0143.3	25	0	-	0	0	.
chr7	121473680	121473681	chr7:121473681:G:A	rs1881382	G	A	G	Sox2_MA0143.3	15	0	-	0	0	.
chr7	121488392	121488393	chr7:121488393:C:G	rs7806442	C	G	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr7	121511122	121511123	chr7:121511123:G:C	rs77254308	G	C	G	Sox2_MA0143.3	1	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr7	121516215	121516216	chr7:121516216:T:C	rs73717384	T	C	t	Sox2_MA0143.3	15	0	+	0	0	.
chr7	121525392	121525393	chr7:121525393:T:G	rs4731027	T	G	G	Sox2_MA0143.3	10	0	-	0	0	.
chr7	121530511	121530512	chr7:121530512:T:G	rs11772079	T	G	T	Sox2_MA0143.3	-11	0	-	0	0	.
chr7	121562258	121562259	chr7:121562259:G:A	rs7778645	G	A	G	Sox2_MA0143.3	5	1	+	8.676919043985553	1.7681642646703324	CCATTGTG
chr7	121576144	121576145	chr7:121576145:T:A	rs757711	T	A	T	Sox2_MA0143.3	18	0	+	0	0	.
chr7	121587942	121587943	chr7:121587943:G:A	rs998057	G	A	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr7	122971453	122971454	chr7:122971454:T:G	rs10249362	T	G	T	Sox2_MA0143.3	15	0	-	0	0	.
chr7	123126215	123126216	chr7:123126216:A:G	rs10487980	A	G	A	Sox2_MA0143.3	16	0	-	0	0	.
chr7	123275657	123275658	chr7:123275658:C:T	rs9641701	C	T	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr7	123415500	123415501	chr7:123415501:G:A	rs805803	G	A	G	Sox2_MA0143.3	5	1	+	9.019595766176417	2.110840986861197	CCATTGTC
chr7	123557368	123557369	chr7:123557369:G:C	rs775985979	G	C	G	Sox2_MA0143.3	27	0	-	0	0	.
chr7	123558654	123558655	chr7:123558655:G:T	rs2037696	G	T	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr7	123604955	123604956	chr7:123604956:G:A	rs7798658	G	A	A	Sox2_MA0143.3	15	0	-	0	0	.
chr7	123624823	123624824	chr7:123624824:A:G	rs148599401	A	G	A	Sox2_MA0143.3	-9	0	-	0	0	.
chr7	123643941	123643942	chr7:123643942:G:T	chr7:123643942:G:T	G	T	g	Sox2_MA0143.3	-14	0	-	0	0	.
chr7	123751695	123751696	chr7:123751696:C:T	rs3757504	C	T	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr7	123782302	123782303	chr7:123782303:A:G	rs4727976	A	G	A	Sox2_MA0143.3	23	0	+	0	0	.
chr7	124067030	124067031	chr7:124067031:G:T	rs10227680	G	T	T	Sox2_MA0143.3	-4	0	+	0	0	.
chr7	124275673	124275674	chr7:124275674:G:A	rs1860578	G	A	A	Sox2_MA0143.3	26	0	-	0	0	.
chr7	124397457	124397458	chr7:124397458:A:T	rs972219	A	T	A	Sox2_MA0143.3	6	1	-	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr7	124536434	124536435	chr7:124536435:T:C	rs17147238	T	C	T	Sox2_MA0143.3	4	1	+	9.800647049772198	2.8918922704569785	CCTTTGTT
chr7	124872710	124872711	chr7:124872711:C:T	rs145696268	C	T	C	Sox2_MA0143.3	13	0	-	0	0	.
chr7	125090930	125090931	chr7:125090931:A:G	rs616697	A	G	A	Sox2_MA0143.3	21	0	-	0	0	.
chr7	125116843	125116844	chr7:125116844:G:C	rs531617099	G	C	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr7	125265005	125265006	chr7:125265006:T:C	rs11771079	T	C	T	Sox2_MA0143.3	-6	0	-	0	0	.
chr7	125492720	125492721	chr7:125492721:G:T	rs13240496	G	T	G	Sox2_MA0143.3	21	0	-	0	0	.
chr7	125547520	125547521	chr7:125547521:G:A	rs2693983	G	A	G	Sox2_MA0143.3	5	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr7	125579147	125579148	chr7:125579148:A:T	rs1123461	A	T	T	Sox2_MA0143.3	13	0	+	0	0	.
chr7	125662179	125662180	chr7:125662180:T:C	rs524630	T	C	c	Sox2_MA0143.3	-18	0	+	0	0	.
chr7	125927465	125927466	chr7:125927466:C:T	rs1468200	C	T	T	Sox2_MA0143.3	12	0	-	0	0	.
chr7	126079372	126079373	chr7:126079373:G:A	rs9649500	G	A	G	Sox2_MA0143.3	1	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr7	126118604	126118605	chr7:126118605:C:A	rs2188778	C	A	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr7	126436618	126436619	chr7:126436619:C:T	rs1419460	C	T	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr7	126573276	126573277	chr7:126573277:G:A	rs12674181	G	A	A	Sox2_MA0143.3	10	0	-	0	0	.
chr7	126706896	126706897	chr7:126706897:A:G	rs7784073	A	G	G	Sox2_MA0143.3	6	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr7	126904367	126904368	chr7:126904368:T:C	rs1008274	T	C	T	Sox2_MA0143.3	4	1	+	9.800647049772198	2.8918922704569785	CCTTTGTT
chr7	127350082	127350083	chr7:127350083:C:T	rs143805162	C	T	C	Sox2_MA0143.3	20	0	+	0	0	.
chr7	127437451	127437452	chr7:127437452:G:T	rs60630803	G	T	G	Sox2_MA0143.3	20	0	-	0	0	.
chr7	127437477	127437478	chr7:127437478:C:T	rs79718297	C	T	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr7	127713788	127713789	chr7:127713789:T:C	rs58406876	T	C	T	Sox2_MA0143.3	3	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr7	127898136	127898137	chr7:127898137:A:C	rs979732883	A	C	A	Sox2_MA0143.3	-16	0	+	0	0	.
chr7	127944171	127944172	chr7:127944172:C:G	rs6976145	C	G	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr7	128097176	128097177	chr7:128097177:G:T	rs12537331	G	T	G	Sox2_MA0143.3	0	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr7	128109321	128109322	chr7:128109322:A:C	rs58719617	A	C	A	Sox2_MA0143.3	2	1	-	9.206767037375712	2.900948058900136	CCTTTGTC
chr7	128117077	128117078	chr7:128117078:G:A	rs144134609	G	A	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr7	128117080	128117081	chr7:128117081:C:A	rs556290841	C	A	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr7	128131845	128131846	chr7:128131846:T:C	rs772934854	T	C	T	Sox2_MA0143.3	-12	0	-	0	0	.
chr7	128172172	128172173	chr7:128172173:A:T	rs55780500	A	T	A	Sox2_MA0143.3	18	0	-	0	0	.
chr7	128210601	128210602	chr7:128210602:G:A	rs1451006	G	A	G	Sox2_MA0143.3	1	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr7	128427825	128427826	chr7:128427826:G:C	rs13227646	G	C	G	Sox2_MA0143.3	15	0	-	0	0	.
chr7	128453961	128453962	chr7:128453962:T:C	rs116968751	T	C	t	Sox2_MA0143.3	9	0	-	0	0	.
chr7	128662917	128662918	chr7:128662918:T:A	rs55799341	T	A	.	Sox2_MA0143.3	6	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr7	128674592	128674593	chr7:128674593:A:G	rs4731497	A	G	.	Sox2_MA0143.3	-3	0	+	0	0	.
chr7	128770686	128770687	chr7:128770687:T:G	rs4566976	T	G	T	Sox2_MA0143.3	21	0	+	0	0	.
chr7	128870084	128870085	chr7:128870085:C:G	rs950115030	C	G	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr7	128914775	128914776	chr7:128914776:C:T	rs141693779	C	T	C	Sox2_MA0143.3	27	0	-	0	0	.
chr7	128985859	128985860	chr7:128985860:A:G	rs17339221	A	G	A	Sox2_MA0143.3	4	1	-	9.800647049772198	2.8918922704569785	CCTTTGTT
chr7	129066984	129066985	chr7:129066985:C:T	rs79951059	C	T	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr7	129067001	129067002	chr7:129067002:C:T	rs763325725	C	T	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr7	129244436	129244437	chr7:129244437:G:C	rs12154376	G	C	G	Sox2_MA0143.3	23	0	-	0	0	.
chr7	129295551	129295552	chr7:129295552:C:T	rs13228005	C	T	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr7	129362166	129362167	chr7:129362167:T:A	rs78438650	T	A	T	Sox2_MA0143.3	19	0	-	0	0	.
chr7	129536334	129536335	chr7:129536335:T:G	rs10267839	T	G	T	Sox2_MA0143.3	4	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr7	129607816	129607817	chr7:129607817:A:G	rs934530351	A	G	A	Sox2_MA0143.3	-19	0	+	0	0	.
chr7	129640666	129640667	chr7:129640667:G:A	rs10268267	G	A	G	Sox2_MA0143.3	10	0	-	0	0	.
chr7	129841062	129841063	chr7:129841063:T:G	rs757853134	T	G	T	Sox2_MA0143.3	-5	0	-	0	0	.
chr7	129859449	129859450	chr7:129859450:A:T	rs956701241	A	T	A	Sox2_MA0143.3	-1	0	-	0	0	.
chr7	129864249	129864250	chr7:129864250:G:A	chr7:129864250:G:A	G	A	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr7	129914532	129914533	chr7:129914533:C:T	rs2693743	C	T	T	Sox2_MA0143.3	0	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr7	130089589	130089590	chr7:130089590:A:G	rs62491315	A	G	A	Sox2_MA0143.3	-7	0	+	0	0	.
chr7	130110102	130110103	chr7:130110103:G:C	rs80046254	G	C	G	Sox2_MA0143.3	5	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr7	130129380	130129381	chr7:130129381:T:C	rs529881051	T	C	T	Sox2_MA0143.3	-20	0	+	0	0	.
chr7	130129383	130129384	chr7:130129384:A:G	rs551582940	A	G	A	Sox2_MA0143.3	-17	0	+	0	0	.
chr7	130229246	130229247	chr7:130229247:C:T	rs60641199	C	T	C	Sox2_MA0143.3	0	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr7	130298000	130298001	chr7:130298001:C:T	rs117425420	C	T	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr7	130350700	130350701	chr7:130350701:T:C	rs781875753	T	C	T	Sox2_MA0143.3	15	0	-	0	0	.
chr7	130453409	130453410	chr7:130453410:A:C	chr7:130453410:A:C	A	C	A	Sox2_MA0143.3	17	0	+	0	0	.
chr7	130780294	130780295	chr7:130780295:T:G	rs9641894	T	G	G	Sox2_MA0143.3	18	0	-	0	0	.
chr7	130900793	130900794	chr7:130900794:T:G	rs157935	T	G	G	Sox2_MA0143.3	3	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr7	130926319	130926320	chr7:130926320:C:T	rs139326117	C	T	C	Sox2_MA0143.3	27	0	-	0	0	.
chr7	130956218	130956219	chr7:130956219:C:T	rs528759466	C	T	C	Sox2_MA0143.3	14	0	-	0	0	.
chr7	130963483	130963484	chr7:130963484:G:A	rs142086165	G	A	G	Sox2_MA0143.3	-3	0	+	0	0	.
chr7	131016325	131016326	chr7:131016326:T:C	rs535927755	T	C	C	Sox2_MA0143.3	2	1	-	9.613475778572903	3.494828071296623	CCATTGTT
chr7	131016328	131016329	chr7:131016329:C:A	rs7801390	C	A	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr7	131055575	131055576	chr7:131055576:G:C	rs10216073	G	C	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr7	131055602	131055603	chr7:131055603:C:G	rs10216071	C	G	G	Sox2_MA0143.3	19	0	+	0	0	.
chr7	131061929	131061930	chr7:131061930:G:A	rs4731735	G	A	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr7	131067197	131067198	chr7:131067198:G:A	rs4510791	G	A	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr7	131124555	131124556	chr7:131124556:C:T	rs73726303	C	T	C	Sox2_MA0143.3	0	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr7	131135023	131135024	chr7:131135024:G:A	rs9690314	G	A	G	Sox2_MA0143.3	11	0	+	0	0	.
chr7	131209386	131209387	chr7:131209387:G:A	rs11760492	G	A	G	Sox2_MA0143.3	0	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr7	131255467	131255468	chr7:131255468:T:C	rs10226063	T	C	C	Sox2_MA0143.3	13	0	-	0	0	.
chr7	131310902	131310903	chr7:131310903:T:C	rs10275276	T	C	C	Sox2_MA0143.3	9	0	-	0	0	.
chr7	131513932	131513933	chr7:131513933:C:T	rs117122654	C	T	C	Sox2_MA0143.3	17	0	-	0	0	.
chr7	131626051	131626052	chr7:131626052:G:A	rs2971746	G	A	A	Sox2_MA0143.3	21	0	+	0	0	.
chr7	131653170	131653171	chr7:131653171:C:T	rs10224858	C	T	C	Sox2_MA0143.3	23	0	+	0	0	.
chr7	131674819	131674820	chr7:131674820:A:G	rs4236633	A	G	G	Sox2_MA0143.3	4	1	-	9.206767037375712	2.2980122580604916	CCTTTGTC
chr7	131818301	131818302	chr7:131818302:A:G	rs11761851	A	G	A	Sox2_MA0143.3	-10	0	-	0	0	.
chr7	131830416	131830417	chr7:131830417:A:G	rs77077206	A	G	A	Sox2_MA0143.3	-10	0	-	0	0	.
chr7	131873696	131873697	chr7:131873697:A:G	rs12706998	A	G	A	Sox2_MA0143.3	7	1	+	3.5547341015215945	8.864090315184848	CCTTTGTA
chr7	131895555	131895556	chr7:131895556:A:G	rs6467396	A	G	G	Sox2_MA0143.3	20	0	-	0	0	.
chr7	132116377	132116378	chr7:132116378:G:A	rs281915	G	A	A	Sox2_MA0143.3	-9	0	-	0	0	.
chr7	132140148	132140149	chr7:132140149:G:A	rs6954317	G	A	A	Sox2_MA0143.3	0	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr7	132221905	132221906	chr7:132221906:G:C	rs13237800	G	C	G	Sox2_MA0143.3	0	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr7	132275638	132275639	chr7:132275639:G:C	rs10954369	G	C	C	Sox2_MA0143.3	9	0	-	0	0	.
chr7	132346291	132346292	chr7:132346292:T:C	rs149083857	T	C	T	Sox2_MA0143.3	-4	0	-	0	0	.
chr7	132379510	132379511	chr7:132379511:C:T	rs62466423	C	T	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr7	132383049	132383050	chr7:132383050:T:G	rs56220543	T	G	T	Sox2_MA0143.3	2	1	+	3.5547341015215945	-2.751084876953981	CCTTTGTA
chr7	132384967	132384968	chr7:132384968:T:G	rs4731867	T	G	T	Sox2_MA0143.3	20	0	+	0	0	.
chr7	132411666	132411667	chr7:132411667:T:C	rs1004674	T	C	T	Sox2_MA0143.3	13	0	-	0	0	.
chr7	132436285	132436286	chr7:132436286:C:T	rs6954690	C	T	C	Sox2_MA0143.3	17	0	-	0	0	.
chr7	132436314	132436315	chr7:132436315:A:C	rs74776015	A	C	A	Sox2_MA0143.3	-12	0	-	0	0	.
chr7	132444015	132444016	chr7:132444016:T:C	rs277494	T	C	C	Sox2_MA0143.3	15	0	+	0	0	.
chr7	132449909	132449910	chr7:132449910:T:C	rs992949	T	C	T	Sox2_MA0143.3	6	1	+	9.613475778572903	2.7047209992576837	CCATTGTT
chr7	132464171	132464172	chr7:132464172:T:C	rs156948	T	C	T	Sox2_MA0143.3	17	0	-	0	0	.
chr7	132690767	132690768	chr7:132690768:T:A	rs602217	T	A	A	Sox2_MA0143.3	10	0	-	0	0	.
chr7	132693412	132693413	chr7:132693413:A:G	rs554703	A	G	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr7	132693490	132693491	chr7:132693491:T:C	rs554907	T	C	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr7	132907674	132907675	chr7:132907675:C:G	rs912360264	C	G	C	Sox2_MA0143.3	25	0	-	0	0	.
chr7	132907696	132907697	chr7:132907697:A:G	rs7794596	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr7	133103841	133103842	chr7:133103842:T:C	rs11771534	T	C	T	Sox2_MA0143.3	21	0	+	0	0	.
chr7	133302058	133302059	chr7:133302059:T:C	rs17167013	T	C	T	Sox2_MA0143.3	6	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr7	133705756	133705757	chr7:133705757:G:A	rs2041996	G	A	G	Sox2_MA0143.3	17	0	-	0	0	.
chr7	133813205	133813206	chr7:133813206:A:G	rs2550994	A	G	A	Sox2_MA0143.3	18	0	+	0	0	.
chr7	133846678	133846679	chr7:133846679:T:C	rs6975134	T	C	T	Sox2_MA0143.3	-2	0	+	0	0	.
chr7	134254525	134254526	chr7:134254526:C:A	rs2544178	C	A	C	Sox2_MA0143.3	5	1	-	8.676919043985553	1.7681642646703324	CCATTGTG
chr7	134339933	134339934	chr7:134339934:A:G	rs1646653	A	G	G	Sox2_MA0143.3	6	1	-	9.019595766176417	2.110840986861197	CCATTGTC
chr7	134404011	134404012	chr7:134404012:G:T	rs6944616	G	T	G	Sox2_MA0143.3	1	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr7	134404026	134404027	chr7:134404027:A:G	rs12672218	A	G	A	Sox2_MA0143.3	-14	0	-	0	0	.
chr7	134459426	134459427	chr7:134459427:C:T	rs918824	C	T	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr7	134459566	134459567	chr7:134459567:A:G	rs369433638	A	G	A	Sox2_MA0143.3	-9	0	-	0	0	.
chr7	134532305	134532306	chr7:134532306:A:G	rs113415832	A	G	A	Sox2_MA0143.3	-6	0	+	0	0	.
chr7	134594666	134594667	chr7:134594667:A:G	rs59634562	A	G	G	Sox2_MA0143.3	8	0	-	0	0	.
chr7	134594671	134594672	chr7:134594672:A:G	rs10245625	A	G	G	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr7	134606116	134606117	chr7:134606117:C:T	rs6951927	C	T	T	Sox2_MA0143.3	23	0	-	0	0	.
chr7	134606119	134606120	chr7:134606120:G:T	rs374540233	G	T	G	Sox2_MA0143.3	20	0	-	0	0	.
chr7	134629537	134629538	chr7:134629538:A:G	rs2032942	A	G	G	Sox2_MA0143.3	12	0	+	0	0	.
chr7	134691094	134691095	chr7:134691095:G:A	rs117215081	G	A	G	Sox2_MA0143.3	23	0	-	0	0	.
chr7	134692513	134692514	chr7:134692514:G:C	rs7812210	G	C	c	Sox2_MA0143.3	24	0	-	0	0	.
chr7	134722946	134722947	chr7:134722947:C:T	rs781445859	C	T	C	Sox2_MA0143.3	19	0	+	0	0	.
chr7	134740854	134740855	chr7:134740855:A:C	rs76274238	A	C	A	Sox2_MA0143.3	6	1	-	9.613475778572903	2.7047209992576837	CCATTGTT
chr7	134744771	134744772	chr7:134744772:C:A	rs55663556	C	A	C	Sox2_MA0143.3	17	0	+	0	0	.
chr7	134744772	134744773	chr7:134744773:C:A	rs55655068	C	A	C	Sox2_MA0143.3	18	0	+	0	0	.
chr7	134747489	134747490	chr7:134747490:T:C	rs13226768	T	C	T	Sox2_MA0143.3	26	0	-	0	0	.
chr7	134792777	134792778	chr7:134792778:C:T	rs17205087	C	T	C	Sox2_MA0143.3	9	0	-	0	0	.
chr7	134814190	134814191	chr7:134814191:C:T	rs9641996	C	T	C	Sox2_MA0143.3	5	1	-	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr7	134823479	134823480	chr7:134823480:C:A	rs139161693	C	A	C	Sox2_MA0143.3	0	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr7	134823491	134823492	chr7:134823492:C:A	rs368984154	C	A	C	Sox2_MA0143.3	12	0	+	0	0	.
chr7	134854843	134854844	chr7:134854844:G:A	rs2006240	G	A	G	Sox2_MA0143.3	-12	0	+	0	0	.
chr7	134888606	134888607	chr7:134888607:G:A	rs6955684	G	A	g	Sox2_MA0143.3	-19	0	+	0	0	.
chr7	134896234	134896235	chr7:134896235:G:T	rs10279106	G	T	G	Sox2_MA0143.3	20	0	+	0	0	.
chr7	135025263	135025264	chr7:135025264:C:T	rs10273390	C	T	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr7	135261342	135261343	chr7:135261343:T:C	rs73446254	T	C	T	Sox2_MA0143.3	3	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr7	135261677	135261678	chr7:135261678:A:G	rs1622491	A	G	A	Sox2_MA0143.3	-6	0	-	0	0	.
chr7	135290700	135290701	chr7:135290701:A:T	rs74698578	A	T	T	Sox2_MA0143.3	13	0	+	0	0	.
chr7	135342362	135342363	chr7:135342363:C:T	rs67694346	C	T	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr7	135367226	135367227	chr7:135367227:C:T	rs4728354	C	T	T	Sox2_MA0143.3	-20	0	-	0	0	.
chr7	135672938	135672939	chr7:135672939:A:G	rs114434586	A	G	A	Sox2_MA0143.3	-11	0	+	0	0	.
chr7	135673453	135673454	chr7:135673454:A:G	rs79580568	A	G	A	Sox2_MA0143.3	-15	0	-	0	0	.
chr7	135679139	135679140	chr7:135679140:A:G	rs3110787	A	G	g	Sox2_MA0143.3	-8	0	+	0	0	.
chr7	135736725	135736726	chr7:135736726:C:G	rs74563285	C	G	C	Sox2_MA0143.3	19	0	-	0	0	.
chr7	135801971	135801972	chr7:135801972:C:G	rs56043146	C	G	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr7	135829372	135829373	chr7:135829373:C:T	rs6962270	C	T	C	Sox2_MA0143.3	17	0	+	0	0	.
chr7	135863543	135863544	chr7:135863544:A:C	rs60838319	A	C	A	Sox2_MA0143.3	-20	0	-	0	0	.
chr7	135943621	135943622	chr7:135943622:T:C	rs73162998	T	C	T	Sox2_MA0143.3	-2	0	+	0	0	.
chr7	135976117	135976118	chr7:135976118:C:A	rs59583641	C	A	C	Sox2_MA0143.3	17	0	-	0	0	.
chr7	135980464	135980465	chr7:135980465:G:A	rs116669115	G	A	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr7	136050897	136050898	chr7:136050898:G:A	rs6977821	G	A	A	Sox2_MA0143.3	-6	0	-	0	0	.
chr7	136116466	136116467	chr7:136116467:G:T	rs17241838	G	T	g	Sox2_MA0143.3	-5	0	-	0	0	.
chr7	136266718	136266719	chr7:136266719:G:C	rs34602243	G	C	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr7	136293056	136293057	chr7:136293057:C:A	rs12154573	C	A	C	Sox2_MA0143.3	0	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr7	136528279	136528280	chr7:136528280:G:T	rs6943470	G	T	T	Sox2_MA0143.3	-8	0	-	0	0	.
chr7	136869351	136869352	chr7:136869352:C:A	rs557282930	C	A	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr7	136870200	136870201	chr7:136870201:C:G	rs12536964	C	G	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr7	136871665	136871666	chr7:136871666:A:G	rs12532627	A	G	A	Sox2_MA0143.3	-9	0	+	0	0	.
chr7	136872896	136872897	chr7:136872897:A:C	rs13235822	A	C	A	Sox2_MA0143.3	18	0	+	0	0	.
chr7	137007214	137007215	chr7:137007215:A:G	rs4341110	A	G	A	Sox2_MA0143.3	-11	0	+	0	0	.
chr7	137127888	137127889	chr7:137127889:C:T	rs17430785	C	T	t	Sox2_MA0143.3	23	0	-	0	0	.
chr7	137209615	137209616	chr7:137209616:C:T	rs6962572	C	T	C	Sox2_MA0143.3	21	0	+	0	0	.
chr7	137267192	137267193	chr7:137267193:C:T	rs11764598	C	T	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr7	137305917	137305918	chr7:137305918:A:G	rs1731954	A	G	A	Sox2_MA0143.3	17	0	+	0	0	.
chr7	137306187	137306188	chr7:137306188:G:T	rs3898947	G	T	g	Sox2_MA0143.3	17	0	+	0	0	.
chr7	137343497	137343498	chr7:137343498:G:A	rs201175803	G	A	G	Sox2_MA0143.3	23	0	+	0	0	.
chr7	137390013	137390014	chr7:137390014:A:G	rs1376607	A	G	A	Sox2_MA0143.3	20	0	+	0	0	.
chr7	137390014	137390015	chr7:137390015:T:C	rs1376608	T	C	T	Sox2_MA0143.3	21	0	+	0	0	.
chr7	137404790	137404791	chr7:137404791:C:T	rs1156143	C	T	C	Sox2_MA0143.3	1	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr7	137462866	137462867	chr7:137462867:C:G	rs34366399	C	G	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr7	137539305	137539306	chr7:137539306:T:A	rs28736349	T	A	T	Sox2_MA0143.3	24	0	-	0	0	.
chr7	137575834	137575835	chr7:137575835:C:T	rs976214046	C	T	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr7	137687800	137687801	chr7:137687801:A:G	rs17169387	A	G	A	Sox2_MA0143.3	-1	0	+	0	0	.
chr7	137836848	137836849	chr7:137836849:C:T	rs73729049	C	T	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr7	137875950	137875951	chr7:137875951:C:G	rs9757	C	G	C	Sox2_MA0143.3	14	0	-	0	0	.
chr7	137878051	137878052	chr7:137878052:C:T	rs3735019	C	T	T	Sox2_MA0143.3	-4	0	+	0	0	.
chr7	137917924	137917925	chr7:137917925:G:A	rs568906957	G	A	G	Sox2_MA0143.3	16	0	-	0	0	.
chr7	138065949	138065950	chr7:138065950:G:A	rs6954846	G	A	A	Sox2_MA0143.3	-18	0	+	0	0	.
chr7	138092730	138092731	chr7:138092731:G:A	chr7:138092731:G:A	G	A	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr7	138137629	138137630	chr7:138137630:G:A	rs12671202	G	A	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr7	138310272	138310273	chr7:138310273:T:C	rs428488	T	C	T	Sox2_MA0143.3	9	0	+	0	0	.
chr7	138320535	138320536	chr7:138320536:A:G	rs357381	A	G	A	Sox2_MA0143.3	4	1	-	3.5547341015215945	-3.3540206777936254	CCTTTGTA
chr7	138352652	138352653	chr7:138352653:A:G	rs55674993	A	G	A	Sox2_MA0143.3	18	0	+	0	0	.
chr7	138353898	138353899	chr7:138353899:C:T	rs690239	C	T	T	Sox2_MA0143.3	1	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr7	138353899	138353900	chr7:138353900:T:G	rs690238	T	G	G	Sox2_MA0143.3	2	1	+	3.5547341015215945	-2.751084876953981	CCTTTGTA
chr7	138389003	138389004	chr7:138389004:G:A	rs11496085	G	A	G	Sox2_MA0143.3	25	0	-	0	0	.
chr7	138565843	138565844	chr7:138565844:T:A	chr7:138565844:T:A	T	A	T	Sox2_MA0143.3	-8	0	-	0	0	.
chr7	138606577	138606578	chr7:138606578:A:G	rs10265131	A	G	G	Sox2_MA0143.3	8	0	-	0	0	.
chr7	138606585	138606586	chr7:138606586:G:C	rs12667717	G	C	G	Sox2_MA0143.3	0	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr7	138663654	138663655	chr7:138663655:T:C	rs78101308	T	C	T	Sox2_MA0143.3	-3	0	-	0	0	.
chr7	138683774	138683775	chr7:138683775:C:T	rs35498158	C	T	C	Sox2_MA0143.3	11	0	-	0	0	.
chr7	138787195	138787196	chr7:138787196:G:A	rs6964987	G	A	G	Sox2_MA0143.3	-12	0	+	0	0	.
chr7	138789143	138789144	chr7:138789144:C:T	rs7780696	C	T	T	Sox2_MA0143.3	12	0	+	0	0	.
chr7	138825588	138825589	chr7:138825589:G:T	rs56851653	G	T	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr7	138845982	138845983	chr7:138845983:A:C	rs73458280	A	C	A	Sox2_MA0143.3	3	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr7	138930105	138930106	chr7:138930106:A:C	rs59365742	A	C	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr7	138943250	138943251	chr7:138943251:C:T	rs12707405	C	T	T	Sox2_MA0143.3	-17	0	-	0	0	.
chr7	139036326	139036327	chr7:139036327:A:G	rs180725953	A	G	A	Sox2_MA0143.3	-12	0	-	0	0	.
chr7	139107459	139107460	chr7:139107460:C:T	rs4732351	C	T	C	Sox2_MA0143.3	20	0	+	0	0	.
chr7	139124664	139124665	chr7:139124665:C:T	rs117245682	C	T	C	Sox2_MA0143.3	15	0	+	0	0	.
chr7	139340921	139340922	chr7:139340922:T:G	rs752142436	T	G	T	Sox2_MA0143.3	6	1	+	9.206767037375712	2.298012258060492	CCTTTGTC
chr7	139379342	139379343	chr7:139379343:A:G	rs10085814	A	G	A	Sox2_MA0143.3	-3	0	-	0	0	.
chr7	139438067	139438068	chr7:139438068:T:C	rs4732379	T	C	C	Sox2_MA0143.3	19	0	+	0	0	.
chr7	139540674	139540675	chr7:139540675:C:A	rs35786058	C	A	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr7	139603361	139603362	chr7:139603362:C:T	rs10235001	C	T	G	Sox2_MA0143.3	16	0	+	0	0	.
chr7	139629360	139629361	chr7:139629361:A:G	rs149761481	A	G	A	Sox2_MA0143.3	-3	0	+	0	0	.
chr7	139636261	139636262	chr7:139636262:C:T	rs565737907	C	T	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr7	139636292	139636293	chr7:139636293:C:G	rs114877274	C	G	C	Sox2_MA0143.3	25	0	+	0	0	.
chr7	139636293	139636294	chr7:139636294:C:T	rs115338771	C	T	C	Sox2_MA0143.3	26	0	+	0	0	.
chr7	139674983	139674984	chr7:139674984:C:T	rs10262234	C	T	C	Sox2_MA0143.3	10	0	+	0	0	.
chr7	139731550	139731551	chr7:139731551:A:T	rs10952510	A	T	T	Sox2_MA0143.3	-8	0	-	0	0	.
chr7	139731551	139731552	chr7:139731552:A:C	rs10952511	A	C	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr7	139736751	139736752	chr7:139736752:G:T	rs11770283	G	T	G	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr7	139803540	139803541	chr7:139803541:T:C	rs2079845	T	C	T	Sox2_MA0143.3	20	0	-	0	0	.
chr7	139920383	139920384	chr7:139920384:T:C	rs180939563	T	C	T	Sox2_MA0143.3	27	0	-	0	0	.
chr7	139920409	139920410	chr7:139920410:G:C	rs115162089	G	C	G	Sox2_MA0143.3	1	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr7	139936818	139936819	chr7:139936819:A:G	rs17161272	A	G	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr7	139949102	139949103	chr7:139949103:A:G	rs886697	A	G	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr7	139949107	139949108	chr7:139949108:G:A	rs1041860823	G	A	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr7	139994349	139994350	chr7:139994350:C:T	rs35131552	C	T	C	Sox2_MA0143.3	22	0	+	0	0	.
chr7	139994700	139994701	chr7:139994701:C:T	rs3801148	C	T	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr7	140007339	140007340	chr7:140007340:A:G	rs740204	A	G	A	Sox2_MA0143.3	25	0	+	0	0	.
chr7	140018101	140018102	chr7:140018102:T:A	rs10242928	T	A	T	Sox2_MA0143.3	-4	0	+	0	0	.
chr7	140024754	140024755	chr7:140024755:C:G	chr7:140024755:C:G	C	G	G	Sox2_MA0143.3	13	0	-	0	0	.
chr7	140024754	140024755	chr7:140024755:C:T	rs3735352	C	T	G	Sox2_MA0143.3	13	0	-	0	0	.
chr7	140048258	140048259	chr7:140048259:G:A	rs117046110	G	A	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr7	140253414	140253415	chr7:140253415:G:C	rs772594115	G	C	G	Sox2_MA0143.3	20	0	-	0	0	.
chr7	140253439	140253440	chr7:140253440:A:G	rs75945335	A	G	A	Sox2_MA0143.3	-5	0	-	0	0	.
chr7	140260976	140260977	chr7:140260977:G:A	rs2429212	G	A	G	Sox2_MA0143.3	26	0	-	0	0	.
chr7	140278911	140278912	chr7:140278912:T:C	rs2471288	T	C	C	Sox2_MA0143.3	20	0	+	0	0	.
chr7	140295253	140295254	chr7:140295254:G:A	rs7805584	G	A	G	Sox2_MA0143.3	13	0	+	0	0	.
chr7	140304238	140304239	chr7:140304239:T:C	rs13247616	T	C	T	Sox2_MA0143.3	-7	0	+	0	0	.
chr7	140420800	140420801	chr7:140420801:C:A	rs28667371	C	A	C	Sox2_MA0143.3	22	0	+	0	0	.
chr7	140480481	140480482	chr7:140480482:C:T	rs10952680	C	T	C	Sox2_MA0143.3	17	0	+	0	0	.
chr7	140489160	140489161	chr7:140489161:A:G	rs71213485	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr7	140533406	140533407	chr7:140533407:T:G	rs7806065	T	G	G	Sox2_MA0143.3	6	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr7	140551962	140551963	chr7:140551963:A:G	rs10227057	A	G	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr7	140555856	140555857	chr7:140555857:C:T	rs11763409	C	T	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr7	140562623	140562624	chr7:140562624:A:T	rs1681794	A	T	T	Sox2_MA0143.3	24	0	-	0	0	.
chr7	140562642	140562643	chr7:140562643:C:A	rs1681795	C	A	C	Sox2_MA0143.3	5	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr7	140621610	140621611	chr7:140621611:T:C	rs17621746	T	C	T	Sox2_MA0143.3	-9	0	-	0	0	.
chr7	140683675	140683676	chr7:140683676:C:T	rs187658586	C	T	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr7	140819167	140819168	chr7:140819168:C:T	rs2706775	C	T	-	Sox2_MA0143.3	11	0	+	0	0	.
chr7	141221602	141221603	chr7:141221603:T:G	rs12703373	T	G	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr7	141333597	141333598	chr7:141333598:C:T	rs79427963	C	T	C	Sox2_MA0143.3	14	0	+	0	0	.
chr7	141342378	141342379	chr7:141342379:T:C	rs17162139	T	C	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr7	141386731	141386732	chr7:141386732:G:T	rs114163997	G	T	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr7	141425777	141425778	chr7:141425778:T:A	rs1860282	T	A	T	Sox2_MA0143.3	-8	0	-	0	0	.
chr7	141489347	141489348	chr7:141489348:C:T	rs57008534	C	T	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr7	141520010	141520011	chr7:141520011:A:G	rs56275003	A	G	G	Sox2_MA0143.3	12	0	+	0	0	.
chr7	141760649	141760650	chr7:141760650:C:G	rs11520886	C	G	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr7	141792709	141792710	chr7:141792710:A:G	rs13223346	A	G	A	Sox2_MA0143.3	-6	0	+	0	0	.
chr7	142063823	142063824	chr7:142063824:G:A	rs114563588	G	A	G	Sox2_MA0143.3	8	0	-	0	0	.
chr7	142082353	142082354	chr7:142082354:A:T	rs10258491	A	T	A	Sox2_MA0143.3	10	0	+	0	0	.
chr7	142135065	142135066	chr7:142135066:T:G	rs549200592	T	G	T	Sox2_MA0143.3	-1	0	+	0	0	.
chr7	142248332	142248333	chr7:142248333:C:T	rs12703448	C	T	T	Sox2_MA0143.3	10	0	-	0	0	.
chr7	142320143	142320144	chr7:142320144:G:A	rs6464486	G	A	g	Sox2_MA0143.3	-19	0	-	0	0	.
chr7	142328126	142328127	chr7:142328127:C:T	rs561200114	C	T	C	Sox2_MA0143.3	27	0	-	0	0	.
chr7	142345232	142345233	chr7:142345233:T:A	rs372796046	T	A	T	Sox2_MA0143.3	23	0	-	0	0	.
chr7	142348178	142348179	chr7:142348179:T:C	rs4607528	T	C	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr7	142355434	142355435	chr7:142355435:G:A	rs1009232838	G	A	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr7	142379828	142379829	chr7:142379829:G:T	rs2734084	G	T	T	Sox2_MA0143.3	-16	0	+	0	0	.
chr7	142386194	142386195	chr7:142386195:C:T	chr7:142386195:C:T	C	T	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr7	142386229	142386230	chr7:142386230:C:T	chr7:142386230:C:T	C	T	C	Sox2_MA0143.3	17	0	+	0	0	.
chr7	142451660	142451661	chr7:142451661:T:A	rs56243825	T	A	.	Sox2_MA0143.3	-13	0	+	0	0	.
chr7	142469893	142469894	chr7:142469894:C:T	rs71878	C	T	.	Sox2_MA0143.3	5	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr7	142470226	142470227	chr7:142470227:C:T	rs1246148730	C	T	.	Sox2_MA0143.3	-12	0	+	0	0	.
chr7	142472559	142472560	chr7:142472560:C:T	rs2855963	C	T	.	Sox2_MA0143.3	1	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr7	142494359	142494360	chr7:142494360:A:T	rs377671767	A	T	.	Sox2_MA0143.3	-3	0	+	0	0	.
chr7	142505884	142505885	chr7:142505885:G:A	rs1021786230	G	A	.	Sox2_MA0143.3	20	0	-	0	0	.
chr7	142506542	142506543	chr7:142506543:C:T	rs1402312624	C	T	.	Sox2_MA0143.3	12	0	-	0	0	.
chr7	142521200	142521201	chr7:142521201:T:G	rs371223874	T	G	T	Sox2_MA0143.3	3	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr7	142619092	142619093	chr7:142619093:C:T	rs17260	C	T	C	Sox2_MA0143.3	7	1	+	9.206767037375712	9.800647049772198	CCTTTGTC
chr7	142754514	142754515	chr7:142754515:G:A	rs369011794	G	A	G	Sox2_MA0143.3	10	0	-	0	0	.
chr7	142771004	142771005	chr7:142771005:C:T	rs62473563	C	T	C	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr7	142785319	142785320	chr7:142785320:G:T	rs3134902	G	T	G	Sox2_MA0143.3	-3	0	-	0	0	.
chr7	142800838	142800839	chr7:142800839:T:C	rs1799886	T	C	T	Sox2_MA0143.3	-20	0	-	0	0	.
chr7	142871124	142871125	chr7:142871125:A:G	rs4987687	A	G	G	Sox2_MA0143.3	4	1	-	9.800647049772198	2.8918922704569785	CCTTTGTT
chr7	142902059	142902060	chr7:142902060:G:A	rs75048907	G	A	G	Sox2_MA0143.3	7	1	-	9.019595766176417	9.613475778572903	CCATTGTC
chr7	142932556	142932557	chr7:142932557:A:C	rs4252379	A	C	C	Sox2_MA0143.3	26	0	+	0	0	.
chr7	142958009	142958010	chr7:142958010:C:T	rs8175977	C	T	T	Sox2_MA0143.3	-15	0	+	0	0	.
chr7	142958025	142958026	chr7:142958026:C:G	rs8175976	C	G	C	Sox2_MA0143.3	1	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr7	142964150	142964151	chr7:142964151:A:G	rs8175954	A	G	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr7	143378886	143378887	chr7:143378887:T:C	rs144684412	T	C	T	Sox2_MA0143.3	12	0	+	0	0	.
chr7	143390982	143390983	chr7:143390983:C:T	rs144114027	C	T	c	Sox2_MA0143.3	-15	0	+	0	0	.
chr7	143390991	143390992	chr7:143390992:G:A	rs4859	G	A	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr7	143469981	143469982	chr7:143469982:A:G	rs2966713	A	G	A	Sox2_MA0143.3	-2	0	-	0	0	.
chr7	143504692	143504693	chr7:143504693:C:T	rs940702	C	T	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr7	143518769	143518770	chr7:143518770:G:T	rs2949767	G	T	G	Sox2_MA0143.3	0	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr7	143737263	143737264	chr7:143737264:T:C	rs144919945	T	C	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr7	143737310	143737311	chr7:143737311:G:C	rs7807308	G	C	C	Sox2_MA0143.3	27	0	+	0	0	.
chr7	143850494	143850495	chr7:143850495:T:G	rs1268766866	T	G	-	Sox2_MA0143.3	-2	0	-	0	0	.
chr7	143936063	143936064	chr7:143936064:T:C	rs13235235	T	C	.	Sox2_MA0143.3	-4	0	+	0	0	.
chr7	144051163	144051164	chr7:144051164:G:A	rs6464574	G	A	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr7	144118650	144118651	chr7:144118651:T:C	rs10263904	T	C	c	Sox2_MA0143.3	-18	0	-	0	0	.
chr7	144395562	144395563	chr7:144395563:C:T	rs1208212	C	T	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr7	144407888	144407889	chr7:144407889:C:T	rs1208174	C	T	T	Sox2_MA0143.3	1	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr7	144407898	144407899	chr7:144407899:A:G	rs11973793	A	G	A	Sox2_MA0143.3	11	0	+	0	0	.
chr7	144466046	144466047	chr7:144466047:C:T	rs13239232	C	T	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr7	144731900	144731901	chr7:144731901:G:A	rs57578188	G	A	G	Sox2_MA0143.3	24	0	-	0	0	.
chr7	145009928	145009929	chr7:145009929:C:T	rs7796110	C	T	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr7	145009929	145009930	chr7:145009930:A:G	rs7778679	A	G	A	Sox2_MA0143.3	-16	0	+	0	0	.
chr7	145142963	145142964	chr7:145142964:C:A	rs1525734	C	A	A	Sox2_MA0143.3	22	0	-	0	0	.
chr7	145142993	145142994	chr7:145142994:G:C	rs60206927	G	C	G	Sox2_MA0143.3	21	0	-	0	0	.
chr7	145331873	145331874	chr7:145331874:A:G	rs6972400	A	G	G	Sox2_MA0143.3	16	0	+	0	0	.
chr7	145932652	145932653	chr7:145932653:A:G	rs79739450	A	G	A	Sox2_MA0143.3	-17	0	-	0	0	.
chr7	146406662	146406663	chr7:146406663:G:T	rs4109977	G	T	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr7	146608495	146608496	chr7:146608496:A:G	rs347197	A	G	A	Sox2_MA0143.3	-20	0	+	0	0	.
chr7	146673681	146673682	chr7:146673682:C:G	rs2159461	C	G	G	Sox2_MA0143.3	-12	0	+	0	0	.
chr7	146709807	146709808	chr7:146709808:T:C	rs972961920	T	C	T	Sox2_MA0143.3	11	0	-	0	0	.
chr7	146992638	146992639	chr7:146992639:T:C	rs10268606	T	C	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr7	147049116	147049117	chr7:147049117:A:G	rs184171565	A	G	A	Sox2_MA0143.3	20	0	+	0	0	.
chr7	147071947	147071948	chr7:147071948:T:C	rs7777531	T	C	T	Sox2_MA0143.3	-16	0	+	0	0	.
chr7	147117158	147117159	chr7:147117159:T:C	rs7794614	T	C	T	Sox2_MA0143.3	-9	0	+	0	0	.
chr7	147294514	147294515	chr7:147294515:A:G	rs2692187	A	G	g	Sox2_MA0143.3	-1	0	-	0	0	.
chr7	147304171	147304172	chr7:147304172:T:A	rs36074712	T	A	T	Sox2_MA0143.3	11	0	+	0	0	.
chr7	147336241	147336242	chr7:147336242:A:G	rs700295	A	G	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr7	147431597	147431598	chr7:147431598:C:G	rs13235593	C	G	C	Sox2_MA0143.3	26	0	-	0	0	.
chr7	147537068	147537069	chr7:147537069:C:T	rs116831564	C	T	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr7	147571970	147571971	chr7:147571971:T:C	rs115830329	T	C	T	Sox2_MA0143.3	-13	0	+	0	0	.
chr7	147586177	147586178	chr7:147586178:C:T	rs6464829	C	T	T	Sox2_MA0143.3	24	0	-	0	0	.
chr7	147771469	147771470	chr7:147771470:T:G	rs148783089	T	G	G	Sox2_MA0143.3	17	0	+	0	0	.
chr7	147803876	147803877	chr7:147803877:C:T	rs118012750	C	T	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr7	147841394	147841395	chr7:147841395:T:G	rs851703	T	G	T	Sox2_MA0143.3	15	0	+	0	0	.
chr7	147991794	147991795	chr7:147991795:G:A	rs2189883	G	A	A	Sox2_MA0143.3	-2	0	+	0	0	.
chr7	148043411	148043412	chr7:148043412:G:A	rs111373516	G	A	G	Sox2_MA0143.3	5	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr7	148202585	148202586	chr7:148202586:T:A	rs10241724	T	A	T	Sox2_MA0143.3	20	0	-	0	0	.
chr7	148242248	148242249	chr7:148242249:T:A	rs1406604	T	A	T	Sox2_MA0143.3	-16	0	-	0	0	.
chr7	148263162	148263163	chr7:148263163:G:A	rs75374169	G	A	G	Sox2_MA0143.3	-9	0	+	0	0	.
chr7	148263171	148263172	chr7:148263172:C:T	rs1317744	C	T	T	Sox2_MA0143.3	0	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr7	148263189	148263190	chr7:148263190:G:C	rs1317745	G	C	G	Sox2_MA0143.3	18	0	+	0	0	.
chr7	148334475	148334476	chr7:148334476:G:A	rs11763534	G	A	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr7	148336958	148336959	chr7:148336959:G:C	rs1177934	G	C	G	Sox2_MA0143.3	10	0	-	0	0	.
chr7	148336982	148336983	chr7:148336983:T:A	rs62470628	T	A	T	Sox2_MA0143.3	-14	0	-	0	0	.
chr7	148338099	148338100	chr7:148338100:A:G	rs10277969	A	G	A	Sox2_MA0143.3	24	0	+	0	0	.
chr7	148340978	148340979	chr7:148340979:C:T	rs6955787	C	T	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr7	148343039	148343040	chr7:148343040:A:G	rs1177925	A	G	G	Sox2_MA0143.3	2	1	+	8.676919043985553	2.5582713367092715	CCATTGTG
chr7	148381271	148381272	chr7:148381272:T:G	rs1730415	T	G	-	Sox2_MA0143.3	7	1	-	3.5547341015215945	9.206767037375712	CCTTTGTA
chr7	148385116	148385117	chr7:148385117:C:T	rs1406597	C	T	T	Sox2_MA0143.3	1	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr7	148385331	148385332	chr7:148385332:T:C	rs1637837	T	C	C	Sox2_MA0143.3	19	0	-	0	0	.
chr7	148385349	148385350	chr7:148385350:G:A	rs533176451	G	A	G	Sox2_MA0143.3	1	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr7	148402638	148402639	chr7:148402639:T:C	rs180821994	T	C	T	Sox2_MA0143.3	25	0	-	0	0	.
chr7	148413864	148413865	chr7:148413865:C:T	rs10244936	C	T	T	Sox2_MA0143.3	17	0	+	0	0	.
chr7	148428282	148428283	chr7:148428283:A:G	rs574048324	A	G	A	Sox2_MA0143.3	18	0	+	0	0	.
chr7	148615745	148615746	chr7:148615746:C:T	rs74454997	C	T	C	Sox2_MA0143.3	21	0	+	0	0	.
chr7	148698246	148698247	chr7:148698247:C:G	rs28364762	C	G	C	Sox2_MA0143.3	13	0	-	0	0	.
chr7	148715278	148715279	chr7:148715279:A:G	rs243532	A	G	A	Sox2_MA0143.3	-1	0	+	0	0	.
chr7	148772623	148772624	chr7:148772624:C:T	rs1029888	C	T	T	Sox2_MA0143.3	-20	0	+	0	0	.
chr7	148772644	148772645	chr7:148772645:C:T	rs115029680	C	T	C	Sox2_MA0143.3	1	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr7	148784395	148784396	chr7:148784396:G:A	rs10241408	G	A	A	Sox2_MA0143.3	-1	0	+	0	0	.
chr7	148798767	148798768	chr7:148798768:A:G	rs67248614	A	G	G	Sox2_MA0143.3	4	1	-	9.206767037375712	2.2980122580604916	CCTTTGTC
chr7	148883716	148883717	chr7:148883717:G:C	rs80052686	G	C	G	Sox2_MA0143.3	21	0	+	0	0	.
chr7	148956759	148956760	chr7:148956760:C:T	rs1722362	C	T	T	Sox2_MA0143.3	-9	0	+	0	0	.
chr7	148964332	148964333	chr7:148964333:G:A	chr7:148964333:G:A	G	A	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr7	148983727	148983728	chr7:148983728:A:G	rs547446200	A	G	A	Sox2_MA0143.3	-15	0	+	0	0	.
chr7	148983731	148983732	chr7:148983732:G:A	rs113040728	G	A	G	Sox2_MA0143.3	-11	0	+	0	0	.
chr7	148983731	148983732	chr7:148983732:G:T	chr7:148983732:G:T	G	T	G	Sox2_MA0143.3	-11	0	+	0	0	.
chr7	148983743	148983744	chr7:148983744:C:T	rs140320751	C	T	C	Sox2_MA0143.3	1	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr7	148983750	148983751	chr7:148983751:T:G	rs377358324	T	G	C	Sox2_MA0143.3	8	0	+	0	0	.
chr7	148983762	148983763	chr7:148983763:C:T	rs370970961	C	T	C	Sox2_MA0143.3	20	0	+	0	0	.
chr7	148985867	148985868	chr7:148985868:A:G	rs143573959	A	G	A	Sox2_MA0143.3	-6	0	+	0	0	.
chr7	149028784	149028785	chr7:149028785:A:G	rs142131482	A	G	A	Sox2_MA0143.3	25	0	-	0	0	.
chr7	149028796	149028797	chr7:149028797:G:C	rs111306155	G	C	G	Sox2_MA0143.3	13	0	-	0	0	.
chr7	149028811	149028812	chr7:149028812:G:A	rs151291341	G	A	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr7	149028822	149028823	chr7:149028823:C:A	rs547430864	C	A	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr7	149122426	149122427	chr7:149122427:T:C	rs7794500	T	C	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr7	149219250	149219251	chr7:149219251:C:A	rs1202396	C	A	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr7	149219292	149219293	chr7:149219293:G:A	rs68182858	G	A	G	Sox2_MA0143.3	7	1	-	9.206767037375712	9.800647049772198	CCTTTGTC
chr7	149239599	149239600	chr7:149239600:G:A	chr7:149239600:G:A	G	A	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr7	149285119	149285120	chr7:149285120:C:G	rs138890106	C	G	C	Sox2_MA0143.3	5	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr7	149298880	149298881	chr7:149298881:C:G	rs58020655	C	G	C	Sox2_MA0143.3	17	0	+	0	0	.
chr7	149328630	149328631	chr7:149328631:T:C	rs56088932	T	C	T	Sox2_MA0143.3	26	0	-	0	0	.
chr7	149328658	149328659	chr7:149328659:C:T	rs564846998	C	T	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr7	149328667	149328668	chr7:149328668:C:T	chr7:149328668:C:T	C	T	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr7	149358890	149358891	chr7:149358891:G:C	rs57589528	G	C	G	Sox2_MA0143.3	27	0	+	0	0	.
chr7	149422193	149422194	chr7:149422194:T:C	rs6956150	T	C	C	Sox2_MA0143.3	13	0	+	0	0	.
chr7	149444838	149444839	chr7:149444839:C:T	rs6956913	C	T	C	Sox2_MA0143.3	27	0	+	0	0	.
chr7	149527468	149527469	chr7:149527469:A:C	rs7809643	A	C	A	Sox2_MA0143.3	-8	0	+	0	0	.
chr7	149590531	149590532	chr7:149590532:C:T	rs7790112	C	T	C	Sox2_MA0143.3	5	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr7	149634745	149634746	chr7:149634746:C:T	rs6965901	C	T	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr7	149640625	149640626	chr7:149640626:G:A	rs354087	G	A	A	Sox2_MA0143.3	-1	0	+	0	0	.
chr7	149666271	149666272	chr7:149666272:C:A	rs855736	C	A	C	Sox2_MA0143.3	5	1	-	9.019595766176417	2.110840986861197	CCATTGTC
chr7	149669408	149669409	chr7:149669409:C:T	rs75030042	C	T	C	Sox2_MA0143.3	16	0	+	0	0	.
chr7	149688045	149688046	chr7:149688046:G:C	rs1033166886	G	C	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr7	149711014	149711015	chr7:149711015:A:G	rs6950083	A	G	A	Sox2_MA0143.3	27	0	-	0	0	.
chr7	149711054	149711055	chr7:149711055:G:A	rs6967449	G	A	A	Sox2_MA0143.3	-13	0	-	0	0	.
chr7	149725027	149725028	chr7:149725028:G:A	rs34289827	G	A	G	Sox2_MA0143.3	17	0	+	0	0	.
chr7	149737039	149737040	chr7:149737040:T:C	chr7:149737040:T:C	T	C	T	Sox2_MA0143.3	3	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr7	149775764	149775765	chr7:149775765:A:G	rs73725601	A	G	A	Sox2_MA0143.3	-6	0	-	0	0	.
chr7	149826047	149826048	chr7:149826048:G:A	rs62492769	G	A	G	Sox2_MA0143.3	-2	0	+	0	0	.
chr7	149863258	149863259	chr7:149863259:C:T	rs10270385	C	T	C	Sox2_MA0143.3	26	0	+	0	0	.
chr7	149881859	149881860	chr7:149881860:C:T	rs4725838	C	T	.	Sox2_MA0143.3	-7	0	+	0	0	.
chr7	149881879	149881880	chr7:149881880:C:A	rs111909541	C	A	.	Sox2_MA0143.3	13	0	+	0	0	.
chr7	149882858	149882859	chr7:149882859:G:C	rs10247524	G	C	.	Sox2_MA0143.3	-4	0	-	0	0	.
chr7	150090981	150090982	chr7:150090982:G:A	rs62502561	G	A	A	Sox2_MA0143.3	0	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr7	150123861	150123862	chr7:150123862:T:C	rs10225026	T	C	N	Sox2_MA0143.3	2	1	-	9.019595766176417	2.900948058900136	CCATTGTC
chr7	150307398	150307399	chr7:150307399:G:T	rs56998970	G	T	t	Sox2_MA0143.3	-4	0	+	0	0	.
chr7	150340933	150340934	chr7:150340934:G:C	rs17173617	G	C	C	Sox2_MA0143.3	5	1	+	8.676919043985553	1.7681642646703324	CCATTGTG
chr7	150400255	150400256	chr7:150400256:A:T	rs116293185	A	T	A	Sox2_MA0143.3	23	0	-	0	0	.
chr7	150404097	150404098	chr7:150404098:T:C	rs113626325	T	C	C	Sox2_MA0143.3	3	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr7	150484308	150484309	chr7:150484309:G:C	rs7810382	G	C	G	Sox2_MA0143.3	15	0	+	0	0	.
chr7	150490156	150490157	chr7:150490157:G:A	rs2222524	G	A	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr7	150490165	150490166	chr7:150490166:A:G	rs6943537	A	G	A	Sox2_MA0143.3	-13	0	-	0	0	.
chr7	150557117	150557118	chr7:150557118:A:G	rs9691773	A	G	A	Sox2_MA0143.3	4	1	-	9.206767037375712	2.2980122580604916	CCTTTGTC
chr7	150563998	150563999	chr7:150563999:C:G	rs6959610	C	G	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr7	150564016	150564017	chr7:150564017:C:T	rs6959617	C	T	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr7	150603787	150603788	chr7:150603788:C:T	rs62504165	C	T	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr7	150659229	150659230	chr7:150659230:G:A	rs10243355	G	A	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr7	150727518	150727519	chr7:150727519:C:T	rs6978252	C	T	C	Sox2_MA0143.3	17	0	-	0	0	.
chr7	150788286	150788287	chr7:150788287:G:A	rs56121033	G	A	G	Sox2_MA0143.3	16	0	-	0	0	.
chr7	150788312	150788313	chr7:150788313:T:C	rs10281675	T	C	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr7	150791527	150791528	chr7:150791528:A:G	rs2302479	A	G	G	Sox2_MA0143.3	16	0	-	0	0	.
chr7	150802720	150802721	chr7:150802721:T:C	rs714886	T	C	C	Sox2_MA0143.3	9	0	-	0	0	.
chr7	150831063	150831064	chr7:150831064:C:T	rs10085873	C	T	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr7	150831837	150831838	chr7:150831838:A:T	rs9648660	A	T	T	Sox2_MA0143.3	-10	0	-	0	0	.
chr7	150847574	150847575	chr7:150847575:A:G	rs74574408	A	G	A	Sox2_MA0143.3	9	0	+	0	0	.
chr7	150851344	150851345	chr7:150851345:T:C	rs10273373	T	C	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr7	150868635	150868636	chr7:150868636:A:G	rs78060742	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr7	150871776	150871777	chr7:150871777:A:G	rs11770409	A	G	A	Sox2_MA0143.3	4	1	-	8.676919043985553	1.7681642646703322	CCATTGTG
chr7	150938875	150938876	chr7:150938876:C:T	rs116936412	C	T	C	Sox2_MA0143.3	17	0	-	0	0	.
chr7	150974125	150974126	chr7:150974126:C:A	rs3800779	C	A	C	Sox2_MA0143.3	17	0	-	0	0	.
chr7	150979641	150979642	chr7:150979642:G:T	rs41309029	G	T	G	Sox2_MA0143.3	8	0	-	0	0	.
chr7	151017724	151017725	chr7:151017725:G:A	rs2373929	G	A	G	Sox2_MA0143.3	24	0	+	0	0	.
chr7	151020655	151020656	chr7:151020656:A:G	rs77556533	A	G	A	Sox2_MA0143.3	6	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr7	151125104	151125105	chr7:151125105:C:T	rs729712	C	T	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr7	151146375	151146376	chr7:151146376:A:G	rs62489630	A	G	A	Sox2_MA0143.3	3	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr7	151227653	151227654	chr7:151227654:G:A	rs3807385	G	A	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr7	151255458	151255459	chr7:151255459:T:C	rs59828731	T	C	C	Sox2_MA0143.3	4	1	+	8.864090315184848	1.9553355358696274	CCTTTGTG
chr7	151336541	151336542	chr7:151336542:T:C	rs2487161	T	C	C	Sox2_MA0143.3	12	0	-	0	0	.
chr7	151409158	151409159	chr7:151409159:C:T	rs12533766	C	T	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr7	151497133	151497134	chr7:151497134:T:C	rs76957874	T	C	T	Sox2_MA0143.3	14	0	+	0	0	.
chr7	151504212	151504213	chr7:151504213:T:C	rs3087741	T	C	C	Sox2_MA0143.3	24	0	+	0	0	.
chr7	151504213	151504214	chr7:151504214:G:A	rs1324701521	G	A	G	Sox2_MA0143.3	25	0	+	0	0	.
chr7	151519001	151519002	chr7:151519002:T:G	chr7:151519002:T:G	T	G	T	Sox2_MA0143.3	6	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr7	151575377	151575378	chr7:151575378:T:C	rs7791529	T	C	-	Sox2_MA0143.3	-20	0	-	0	0	.
chr7	151667177	151667178	chr7:151667178:C:A	rs1105842	C	A	-	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr7	151712225	151712226	chr7:151712226:A:G	rs7778862	A	G	-	Sox2_MA0143.3	16	0	-	0	0	.
chr7	151754608	151754609	chr7:151754609:C:T	rs62478188	C	T	T	Sox2_MA0143.3	-19	0	+	0	0	.
chr7	151763977	151763978	chr7:151763978:G:A	rs543632294	G	A	G	Sox2_MA0143.3	17	0	-	0	0	.
chr7	151802170	151802171	chr7:151802171:C:T	rs75799992	C	T	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr7	151807013	151807014	chr7:151807014:C:T	rs62478243	C	T	T	Sox2_MA0143.3	23	0	-	0	0	.
chr7	151807050	151807051	chr7:151807051:C:T	rs78150542	C	T	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr7	151892223	151892224	chr7:151892224:G:C	rs73160075	G	C	G	Sox2_MA0143.3	16	0	+	0	0	.
chr7	152071108	152071109	chr7:152071109:G:A	rs112043662	G	A	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr7	152394313	152394314	chr7:152394314:A:C	rs1268923628	A	C	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr7	152500110	152500111	chr7:152500111:G:A	rs73476928	G	A	A	Sox2_MA0143.3	25	0	-	0	0	.
chr7	152633701	152633702	chr7:152633702:G:A	rs4726192	G	A	g	Sox2_MA0143.3	16	0	+	0	0	.
chr7	152675128	152675129	chr7:152675129:T:C	chr7:152675129:T:C	T	C	T	Sox2_MA0143.3	-10	0	+	0	0	.
chr7	152736676	152736677	chr7:152736677:C:T	rs117979639	C	T	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr7	152850654	152850655	chr7:152850655:C:T	rs117162275	C	T	C	Sox2_MA0143.3	0	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr7	152985139	152985140	chr7:152985140:A:T	rs6970377	A	T	A	Sox2_MA0143.3	-13	0	-	0	0	.
chr7	153022146	153022147	chr7:153022147:T:C	rs76531588	T	C	T	Sox2_MA0143.3	23	0	-	0	0	.
chr7	153302391	153302392	chr7:153302392:A:C	rs60976072	A	C	A	Sox2_MA0143.3	-4	0	+	0	0	.
chr7	153320335	153320336	chr7:153320336:G:A	rs389153	G	A	A	Sox2_MA0143.3	26	0	+	0	0	.
chr7	153341017	153341018	chr7:153341018:C:A	rs6943460	C	A	C	Sox2_MA0143.3	20	0	-	0	0	.
chr7	153354317	153354318	chr7:153354318:T:G	rs1444459	T	G	T	Sox2_MA0143.3	20	0	+	0	0	.
chr7	153399724	153399725	chr7:153399725:T:C	rs10269340	T	C	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr7	153457876	153457877	chr7:153457877:G:A	rs116365710	G	A	G	Sox2_MA0143.3	22	0	-	0	0	.
chr7	153947716	153947717	chr7:153947717:A:G	rs10256069	A	G	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr7	154476367	154476368	chr7:154476368:G:A	rs73163046	G	A	G	Sox2_MA0143.3	11	0	+	0	0	.
chr7	154499099	154499100	chr7:154499100:G:A	rs73729315	G	A	G	Sox2_MA0143.3	24	0	+	0	0	.
chr7	154558728	154558729	chr7:154558729:G:A	rs11764641	G	A	A	Sox2_MA0143.3	27	0	-	0	0	.
chr7	154594969	154594970	chr7:154594970:C:T	rs10227971	C	T	T	Sox2_MA0143.3	-7	0	+	0	0	.
chr7	154610924	154610925	chr7:154610925:A:G	rs28588717	A	G	A	Sox2_MA0143.3	-1	0	+	0	0	.
chr7	154610929	154610930	chr7:154610930:T:C	rs28548628	T	C	T	Sox2_MA0143.3	4	1	+	3.5547341015215945	-3.3540206777936254	CCTTTGTA
chr7	154789773	154789774	chr7:154789774:T:G	rs4960613	T	G	T	Sox2_MA0143.3	4	1	+	9.206767037375712	2.2980122580604916	CCTTTGTC
chr7	154789782	154789783	chr7:154789783:C:T	rs78293533	C	T	C	Sox2_MA0143.3	13	0	+	0	0	.
chr7	154792553	154792554	chr7:154792554:A:T	rs1525755	A	T	T	Sox2_MA0143.3	7	1	+	3.5547341015215945	9.800647049772198	CCTTTGTA
chr7	154867339	154867340	chr7:154867340:G:A	rs3807281	G	A	G	Sox2_MA0143.3	15	0	-	0	0	.
chr7	154872279	154872280	chr7:154872280:G:A	rs3778741	G	A	G	Sox2_MA0143.3	11	0	+	0	0	.
chr7	154874556	154874557	chr7:154874557:C:G	chr7:154874557:C:G	C	G	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr7	154874556	154874557	chr7:154874557:C:T	rs73728633	C	T	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr7	154874559	154874560	chr7:154874560:C:A	rs56024267	C	A	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr7	155008173	155008174	chr7:155008174:T:C	rs306289	T	C	C	Sox2_MA0143.3	23	0	-	0	0	.
chr7	155085556	155085557	chr7:155085557:A:G	rs1371817	A	G	A	Sox2_MA0143.3	-15	0	-	0	0	.
chr7	155123848	155123849	chr7:155123849:G:T	rs1609440	G	T	T	Sox2_MA0143.3	12	0	+	0	0	.
chr7	155171134	155171135	chr7:155171135:A:G	rs4545044	A	G	G	Sox2_MA0143.3	6	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr7	155209080	155209081	chr7:155209081:A:G	rs79620211	A	G	A	Sox2_MA0143.3	-1	0	-	0	0	.
chr7	155211036	155211037	chr7:155211037:T:C	rs11766971	T	C	C	Sox2_MA0143.3	19	0	+	0	0	.
chr7	155211044	155211045	chr7:155211045:C:T	rs75003816	C	T	C	Sox2_MA0143.3	27	0	+	0	0	.
chr7	155230448	155230449	chr7:155230449:C:T	rs138481331	C	T	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr7	155230490	155230491	chr7:155230491:A:G	rs6964381	A	G	T	Sox2_MA0143.3	27	0	+	0	0	.
chr7	155296660	155296661	chr7:155296661:T:C	rs1128636	T	C	T	Sox2_MA0143.3	26	0	-	0	0	.
chr7	155305917	155305918	chr7:155305918:G:A	rs73178617	G	A	G	Sox2_MA0143.3	-5	0	+	0	0	.
chr7	155317350	155317351	chr7:155317351:C:G	rs36193617	C	G	-	Sox2_MA0143.3	1	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr7	155324171	155324172	chr7:155324172:G:C	rs149809465	G	C	-	Sox2_MA0143.3	20	0	-	0	0	.
chr7	155332889	155332890	chr7:155332890:A:C	rs6950873	A	C	C	Sox2_MA0143.3	8	0	+	0	0	.
chr7	155371559	155371560	chr7:155371560:C:G	rs7785456	C	G	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr7	155371895	155371896	chr7:155371896:G:A	rs13237172	G	A	G	Sox2_MA0143.3	1	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr7	155398044	155398045	chr7:155398045:G:A	rs12698188	G	A	A	Sox2_MA0143.3	-7	0	-	0	0	.
chr7	155411139	155411140	chr7:155411140:G:T	rs10807663	G	T	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr7	155414052	155414053	chr7:155414053:C:T	rs4716916	C	T	C	Sox2_MA0143.3	24	0	+	0	0	.
chr7	155471543	155471544	chr7:155471544:C:T	rs117366837	C	T	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr7	155497863	155497864	chr7:155497864:G:A	rs62481186	G	A	G	Sox2_MA0143.3	9	0	-	0	0	.
chr7	155535441	155535442	chr7:155535442:A:C	rs12698016	A	C	A	Sox2_MA0143.3	14	0	-	0	0	.
chr7	155535475	155535476	chr7:155535476:C:G	rs13233867	C	G	C	Sox2_MA0143.3	-20	0	-	0	0	.
chr7	155596116	155596117	chr7:155596117:A:G	rs73165176	A	G	A	Sox2_MA0143.3	9	0	-	0	0	.
chr7	155667604	155667605	chr7:155667605:C:T	rs4716892	C	T	T	Sox2_MA0143.3	-18	0	+	0	0	.
chr7	155681082	155681083	chr7:155681083:T:C	chr7:155681083:T:C	T	C	T	Sox2_MA0143.3	-18	0	+	0	0	.
chr7	155834788	155834789	chr7:155834789:G:A	rs1225391	G	A	G	Sox2_MA0143.3	12	0	+	0	0	.
chr7	155868133	155868134	chr7:155868134:C:T	rs12539086	C	T	C	Sox2_MA0143.3	-20	0	-	0	0	.
chr7	155873060	155873061	chr7:155873061:T:C	rs4716555	T	C	T	Sox2_MA0143.3	3	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr7	155885671	155885672	chr7:155885672:C:T	rs114069009	C	T	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr7	155900786	155900787	chr7:155900787:C:A	rs1824552	C	A	C	Sox2_MA0143.3	5	1	-	9.019595766176417	2.110840986861197	CCATTGTC
chr7	155923055	155923056	chr7:155923056:A:G	rs62481749	A	G	A	Sox2_MA0143.3	21	0	-	0	0	.
chr7	155928850	155928851	chr7:155928851:T:A	rs7790529	T	A	A	Sox2_MA0143.3	-9	0	+	0	0	.
chr7	155960256	155960257	chr7:155960257:G:A	rs79168201	G	A	G	Sox2_MA0143.3	-14	0	+	0	0	.
chr7	155960292	155960293	chr7:155960293:G:T	rs12531508	G	T	G	Sox2_MA0143.3	22	0	+	0	0	.
chr7	155964025	155964026	chr7:155964026:C:T	rs74490434	C	T	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr7	155983324	155983325	chr7:155983325:G:T	rs1531288	G	T	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr7	156005322	156005323	chr7:156005323:C:T	rs4716579	C	T	C	Sox2_MA0143.3	25	0	-	0	0	.
chr7	156005332	156005333	chr7:156005333:A:G	rs4716966	A	G	G	Sox2_MA0143.3	15	0	-	0	0	.
chr7	156046460	156046461	chr7:156046461:G:A	rs62482594	G	A	G	Sox2_MA0143.3	-5	0	+	0	0	.
chr7	156046477	156046478	chr7:156046478:T:C	rs62482595	T	C	C	Sox2_MA0143.3	12	0	+	0	0	.
chr7	156075637	156075638	chr7:156075638:A:G	rs1005465	A	G	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr7	156078917	156078918	chr7:156078918:G:A	rs729595	G	A	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr7	156099320	156099321	chr7:156099321:C:A	rs192725144	C	A	C	Sox2_MA0143.3	26	0	-	0	0	.
chr7	156166712	156166713	chr7:156166713:C:G	rs760201	C	G	G	Sox2_MA0143.3	1	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr7	156219535	156219536	chr7:156219536:T:C	rs10281910	T	C	C	Sox2_MA0143.3	15	0	+	0	0	.
chr7	156232129	156232130	chr7:156232130:T:A	rs1175443	T	A	A	Sox2_MA0143.3	-8	0	-	0	0	.
chr7	156334743	156334744	chr7:156334744:G:T	rs28495491	G	T	G	Sox2_MA0143.3	20	0	+	0	0	.
chr7	156334748	156334749	chr7:156334749:G:A	rs10241238	G	A	G	Sox2_MA0143.3	25	0	+	0	0	.
chr7	156356765	156356766	chr7:156356766:G:A	rs7783837	G	A	g	Sox2_MA0143.3	-6	0	+	0	0	.
chr7	156380543	156380544	chr7:156380544:T:C	rs10225292	T	C	T	Sox2_MA0143.3	10	0	-	0	0	.
chr7	156436930	156436931	chr7:156436931:T:C	rs1880341	T	C	C	Sox2_MA0143.3	18	0	+	0	0	.
chr7	156518244	156518245	chr7:156518245:G:A	rs77601806	G	A	G	Sox2_MA0143.3	25	0	-	0	0	.
chr7	156518253	156518254	chr7:156518254:G:A	rs12672217	G	A	A	Sox2_MA0143.3	16	0	-	0	0	.
chr7	156545385	156545386	chr7:156545386:C:T	rs141093751	C	T	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr7	156548006	156548007	chr7:156548007:G:A	rs542487260	G	A	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr7	156549503	156549504	chr7:156549504:C:G	rs4716632	C	G	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr7	156578108	156578109	chr7:156578109:G:A	rs7799972	G	A	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr7	156585711	156585712	chr7:156585712:C:T	rs56388092	C	T	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr7	156704336	156704337	chr7:156704337:G:C	rs149629718	G	C	G	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr7	156964924	156964925	chr7:156964925:T:C	rs2024265	T	C	T	Sox2_MA0143.3	22	0	+	0	0	.
chr7	156988910	156988911	chr7:156988911:G:A	rs12671438	G	A	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr7	156999820	156999821	chr7:156999821:G:A	rs118076021	G	A	g	Sox2_MA0143.3	-6	0	+	0	0	.
chr7	156999820	156999821	chr7:156999821:G:T	chr7:156999821:G:T	G	T	g	Sox2_MA0143.3	-6	0	+	0	0	.
chr7	157056585	157056586	chr7:157056586:C:T	rs371090328	C	T	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr7	157093284	157093285	chr7:157093285:A:G	rs12534197	A	G	A	Sox2_MA0143.3	10	0	+	0	0	.
chr7	157158484	157158485	chr7:157158485:G:C	rs17645539	G	C	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr7	157193445	157193446	chr7:157193446:T:A	rs112458138	T	A	T	Sox2_MA0143.3	-6	0	+	0	0	.
chr7	157272268	157272269	chr7:157272269:G:C	rs549046697	G	C	G	Sox2_MA0143.3	14	0	+	0	0	.
chr7	157291814	157291815	chr7:157291815:T:C	rs2706166	T	C	T	Sox2_MA0143.3	24	0	-	0	0	.
chr7	157307965	157307966	chr7:157307966:C:T	chr7:157307966:C:T	C	T	C	Sox2_MA0143.3	5	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr7	157318417	157318418	chr7:157318418:C:A	rs10228030	C	A	A	Sox2_MA0143.3	-19	0	-	0	0	.
chr7	157374647	157374648	chr7:157374648:C:G	rs2366506	C	G	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr7	157400248	157400249	chr7:157400249:C:T	rs2240993	C	T	T	Sox2_MA0143.3	18	0	+	0	0	.
chr7	157403351	157403352	chr7:157403352:A:G	rs945120849	A	G	A	Sox2_MA0143.3	21	0	+	0	0	.
chr7	157408208	157408209	chr7:157408209:C:T	rs73176498	C	T	C	Sox2_MA0143.3	24	0	-	0	0	.
chr7	157436015	157436016	chr7:157436016:C:T	rs6980250	C	T	-	Sox2_MA0143.3	-11	0	+	0	0	.
chr7	157460988	157460989	chr7:157460989:G:A	rs17837764	G	A	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr7	157568680	157568681	chr7:157568681:T:G	chr7:157568681:T:G	T	G	t	Sox2_MA0143.3	8	0	-	0	0	.
chr7	157702131	157702132	chr7:157702132:T:A	rs2952633	T	A	a	Sox2_MA0143.3	8	0	+	0	0	.
chr7	157702139	157702140	chr7:157702140:C:T	rs36120437	C	T	c	Sox2_MA0143.3	16	0	+	0	0	.
chr7	157714487	157714488	chr7:157714488:T:C	rs13247650	T	C	T	Sox2_MA0143.3	2	1	-	9.613475778572903	3.494828071296623	CCATTGTT
chr7	157772859	157772860	chr7:157772860:T:G	rs55667467	T	G	G	Sox2_MA0143.3	26	0	+	0	0	.
chr7	157784547	157784548	chr7:157784548:C:T	rs60590651	C	T	C	Sox2_MA0143.3	25	0	-	0	0	.
chr7	157842178	157842179	chr7:157842179:C:T	rs572886827	C	T	C	Sox2_MA0143.3	8	0	+	0	0	.
chr7	157857972	157857973	chr7:157857973:T:C	rs111318495	T	C	T	Sox2_MA0143.3	-16	0	+	0	0	.
chr7	157888651	157888652	chr7:157888652:C:T	rs4716508	C	T	T	Sox2_MA0143.3	21	0	+	0	0	.
chr7	157975447	157975448	chr7:157975448:T:C	rs6955009	T	C	T	Sox2_MA0143.3	22	0	+	0	0	.
chr7	157996279	157996280	chr7:157996280:C:G	rs10258292	C	G	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr7	158011085	158011086	chr7:158011086:A:G	rs10229869	A	G	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr7	158061250	158061251	chr7:158061251:T:C	rs11982669	T	C	T	Sox2_MA0143.3	25	0	-	0	0	.
chr7	158113475	158113476	chr7:158113476:A:C	rs2335845	A	C	C	Sox2_MA0143.3	19	0	-	0	0	.
chr7	158113489	158113490	chr7:158113490:C:G	rs2335844	C	G	C	Sox2_MA0143.3	5	1	-	9.019595766176417	2.110840986861197	CCATTGTC
chr7	158116667	158116668	chr7:158116668:T:C	rs10256104	T	C	T	Sox2_MA0143.3	22	0	+	0	0	.
chr7	158134500	158134501	chr7:158134501:G:A	rs6960916	G	A	G	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr7	158156938	158156939	chr7:158156939:C:T	rs2335482	C	T	-	Sox2_MA0143.3	17	0	+	0	0	.
chr7	158157146	158157147	chr7:158157147:T:C	rs2335483	T	C	-	Sox2_MA0143.3	-3	0	+	0	0	.
chr7	158161315	158161316	chr7:158161316:T:C	rs7801641	T	C	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr7	158318005	158318006	chr7:158318006:A:G	rs574425044	A	G	A	Sox2_MA0143.3	4	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr7	158318021	158318022	chr7:158318022:C:T	chr7:158318022:C:T	C	T	C	Sox2_MA0143.3	-12	0	-	0	0	.
chr7	158318114	158318115	chr7:158318115:G:A	rs10268413	G	A	A	Sox2_MA0143.3	-2	0	-	0	0	.
chr7	158318131	158318132	chr7:158318132:G:A	rs183560308	G	A	A	Sox2_MA0143.3	-19	0	-	0	0	.
chr7	158345501	158345502	chr7:158345502:C:T	rs6951257	C	T	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr7	158382678	158382679	chr7:158382679:G:A	rs4243843	G	A	G	Sox2_MA0143.3	14	0	+	0	0	.
chr7	158414408	158414409	chr7:158414409:G:A	rs2335170	G	A	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr7	158493996	158493997	chr7:158493997:A:G	rs10224899	A	G	A	Sox2_MA0143.3	-9	0	+	0	0	.
chr7	158537210	158537211	chr7:158537211:G:A	rs10273384	G	A	G	Sox2_MA0143.3	15	0	+	0	0	.
chr7	158555549	158555550	chr7:158555550:G:T	rs62478277	G	T	G	Sox2_MA0143.3	5	1	+	8.676919043985553	1.7681642646703324	CCATTGTG
chr7	158592189	158592190	chr7:158592190:G:A	rs55974008	G	A	G	Sox2_MA0143.3	26	0	-	0	0	.
chr7	158657692	158657693	chr7:158657693:G:T	rs12670222	G	T	-	Sox2_MA0143.3	-2	0	-	0	0	.
chr7	158658272	158658273	chr7:158658273:A:T	rs12533939	A	T	A	Sox2_MA0143.3	19	0	-	0	0	.
chr7	158709015	158709016	chr7:158709016:G:A	rs73729935	G	A	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr7	158735541	158735542	chr7:158735542:A:G	rs3816462	A	G	G	Sox2_MA0143.3	26	0	+	0	0	.
chr7	158743773	158743774	chr7:158743774:T:G	rs66795622	T	G	T	Sox2_MA0143.3	16	0	+	0	0	.
chr7	158771791	158771792	chr7:158771792:T:C	rs73519564	T	C	T	Sox2_MA0143.3	3	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr7	158997354	158997355	chr7:158997355:C:A	rs78400686	C	A	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr7	159018134	159018135	chr7:159018135:T:C	rs71546435	T	C	-	Sox2_MA0143.3	19	0	+	0	0	.
chr7	159084084	159084085	chr7:159084085:G:A	rs73527827	G	A	G	Sox2_MA0143.3	19	0	+	0	0	.
chr7	159097133	159097134	chr7:159097134:A:C	chr7:159097134:A:C	A	C	A	Sox2_MA0143.3	6	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr7	159117565	159117566	chr7:159117566:G:T	rs146802394	G	T	G	Sox2_MA0143.3	26	0	-	0	0	.
chr7	159122519	159122520	chr7:159122520:C:T	rs56157635	C	T	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr7	159136188	159136189	chr7:159136189:C:A	rs435969	C	A	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr7	159220745	159220746	chr7:159220746:G:A	rs77694141	G	A	G	Sox2_MA0143.3	-3	0	-	0	0	.
chr8	275952	275953	chr8:275953:T:C	rs12114355	T	C	.	Sox2_MA0143.3	3	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr8	295146	295147	chr8:295147:G:C	rs17065683	G	C	.	Sox2_MA0143.3	-1	0	+	0	0	.
chr8	302879	302880	chr8:302880:G:A	rs56168069	G	A	.	Sox2_MA0143.3	-15	0	+	0	0	.
chr8	352886	352887	chr8:352887:G:C	rs75615572	G	C	.	Sox2_MA0143.3	26	0	-	0	0	.
chr8	353811	353812	chr8:353812:G:T	rs59550098	G	T	.	Sox2_MA0143.3	22	0	-	0	0	.
chr8	353840	353841	chr8:353841:C:A	rs59077426	C	A	.	Sox2_MA0143.3	-7	0	-	0	0	.
chr8	364764	364765	chr8:364765:A:C	rs6558696	A	C	.	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr8	408251	408252	chr8:408252:A:T	rs117427427	A	T	.	Sox2_MA0143.3	-16	0	+	0	0	.
chr8	422157	422158	chr8:422158:C:T	rs141860614	C	T	.	Sox2_MA0143.3	22	0	-	0	0	.
chr8	462692	462693	chr8:462693:C:T	rs10087844	C	T	C	Sox2_MA0143.3	15	0	-	0	0	.
chr8	564977	564978	chr8:564978:G:T	rs183918764	G	T	G	Sox2_MA0143.3	0	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr8	615515	615516	chr8:615516:G:A	rs145066056	G	A	G	Sox2_MA0143.3	17	0	-	0	0	.
chr8	616735	616736	chr8:616736:G:A	rs115563518	G	A	g	Sox2_MA0143.3	21	0	-	0	0	.
chr8	625369	625370	chr8:625370:A:C	rs62486184	A	C	C	Sox2_MA0143.3	3	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr8	632120	632121	chr8:632121:G:C	rs147863030	G	C	G	Sox2_MA0143.3	12	0	+	0	0	.
chr8	634343	634344	chr8:634344:G:A	rs568608822	G	A	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr8	649572	649573	chr8:649573:T:G	rs1669720	T	G	T	Sox2_MA0143.3	7	1	+	9.800647049772198	8.864090315184848	CCTTTGTT
chr8	649577	649578	chr8:649578:G:A	rs143190406	G	A	G	Sox2_MA0143.3	12	0	+	0	0	.
chr8	654938	654939	chr8:654939:C:G	rs1025571553	C	G	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr8	657565	657566	chr8:657566:C:T	rs62486240	C	T	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr8	682121	682122	chr8:682122:T:C	rs62487396	T	C	T	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr8	690468	690469	chr8:690469:G:C	rs76626135	G	C	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr8	754489	754490	chr8:754490:C:G	rs28524105	C	G	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr8	760719	760720	chr8:760720:G:A	rs7460845	G	A	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr8	989081	989082	chr8:989082:G:A	rs143914193	G	A	g	Sox2_MA0143.3	-13	0	+	0	0	.
chr8	1028664	1028665	chr8:1028665:T:C	rs148040306	T	C	T	Sox2_MA0143.3	27	0	-	0	0	.
chr8	1032559	1032560	chr8:1032560:A:G	rs60227021	A	G	A	Sox2_MA0143.3	17	0	+	0	0	.
chr8	1164848	1164849	chr8:1164849:T:C	rs10096352	T	C	C	Sox2_MA0143.3	13	0	+	0	0	.
chr8	1174024	1174025	chr8:1174025:C:T	rs79435448	C	T	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr8	1174031	1174032	chr8:1174032:C:T	rs13267567	C	T	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr8	1187160	1187161	chr8:1187161:T:C	rs61384416	T	C	T	Sox2_MA0143.3	2	1	-	9.613475778572903	3.494828071296623	CCATTGTT
chr8	1192513	1192514	chr8:1192514:G:A	rs66506945	G	A	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr8	1206130	1206131	chr8:1206131:G:C	rs34003842	G	C	G	Sox2_MA0143.3	18	0	-	0	0	.
chr8	1318762	1318763	chr8:1318763:C:A	rs10094861	C	A	C	Sox2_MA0143.3	1	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr8	1319029	1319030	chr8:1319030:G:A	rs113896368	G	A	A	Sox2_MA0143.3	14	0	-	0	0	.
chr8	1319045	1319046	chr8:1319046:C:T	rs11782996	C	T	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr8	1319860	1319861	chr8:1319861:G:C	rs17754389	G	C	G	Sox2_MA0143.3	25	0	-	0	0	.
chr8	1345464	1345465	chr8:1345465:C:G	rs6558455	C	G	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr8	1392469	1392470	chr8:1392470:C:T	rs12681979	C	T	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr8	1499395	1499396	chr8:1499396:A:G	chr8:1499396:A:G	A	G	A	Sox2_MA0143.3	10	0	+	0	0	.
chr8	1501229	1501230	chr8:1501230:G:A	rs2286218	G	A	A	Sox2_MA0143.3	24	0	-	0	0	.
chr8	1503150	1503151	chr8:1503151:T:G	rs7001927	T	G	T	Sox2_MA0143.3	-12	0	+	0	0	.
chr8	1564276	1564277	chr8:1564277:T:C	rs2906584	T	C	T	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr8	1620609	1620610	chr8:1620610:G:A	rs2956963	G	A	G	Sox2_MA0143.3	23	0	+	0	0	.
chr8	1655196	1655197	chr8:1655197:A:T	rs736316	A	T	A	Sox2_MA0143.3	22	0	+	0	0	.
chr8	1682302	1682303	chr8:1682303:C:T	rs4875888	C	T	T	Sox2_MA0143.3	8	0	-	0	0	.
chr8	1767143	1767144	chr8:1767144:G:T	rs117447719	G	T	G	Sox2_MA0143.3	23	0	+	0	0	.
chr8	1809553	1809554	chr8:1809554:C:T	rs186852442	C	T	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr8	1809557	1809558	chr8:1809558:T:G	rs56367862	T	G	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr8	1819837	1819838	chr8:1819838:A:G	rs6558550	A	G	A	Sox2_MA0143.3	19	0	+	0	0	.
chr8	1836692	1836693	chr8:1836693:G:A	rs6992502	G	A	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr8	1837841	1837842	chr8:1837842:G:C	rs74939507	G	C	G	Sox2_MA0143.3	14	0	+	0	0	.
chr8	1837854	1837855	chr8:1837855:T:C	rs11990922	T	C	T	Sox2_MA0143.3	27	0	+	0	0	.
chr8	1840654	1840655	chr8:1840655:C:T	rs10105611	C	T	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr8	1862723	1862724	chr8:1862724:A:G	rs6558556	A	G	a	Sox2_MA0143.3	22	0	+	0	0	.
chr8	1873083	1873084	chr8:1873084:G:T	rs3824135	G	T	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr8	1903193	1903194	chr8:1903194:T:C	rs78098397	T	C	T	Sox2_MA0143.3	-1	0	+	0	0	.
chr8	1903215	1903216	chr8:1903216:C:T	rs2294034	C	T	C	Sox2_MA0143.3	21	0	+	0	0	.
chr8	1949808	1949809	chr8:1949809:C:T	rs117979728	C	T	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr8	1953447	1953448	chr8:1953448:A:G	rs17683365	A	G	A	Sox2_MA0143.3	16	0	+	0	0	.
chr8	2018284	2018285	chr8:2018285:C:G	rs13274751	C	G	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr8	2033348	2033349	chr8:2033349:T:G	rs58721325	T	G	T	Sox2_MA0143.3	-9	0	+	0	0	.
chr8	2089883	2089884	chr8:2089884:C:T	rs74523519	C	T	C	Sox2_MA0143.3	10	0	+	0	0	.
chr8	2127841	2127842	chr8:2127842:C:G	rs35670997	C	G	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr8	2127848	2127849	chr8:2127849:G:C	rs977880812	G	C	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr8	2134896	2134897	chr8:2134897:T:G	rs73657747	T	G	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr8	2134914	2134915	chr8:2134915:G:A	rs118092894	G	A	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr8	2152516	2152517	chr8:2152517:A:C	rs12542772	A	C	C	Sox2_MA0143.3	19	0	+	0	0	.
chr8	2152947	2152948	chr8:2152948:C:T	rs62501403	C	T	C	Sox2_MA0143.3	21	0	+	0	0	.
chr8	2182809	2182810	chr8:2182810:A:G	rs17064857	A	G	A	Sox2_MA0143.3	7	1	+	3.5547341015215945	8.864090315184848	CCTTTGTA
chr8	2242438	2242439	chr8:2242439:A:C	rs200120688	A	C	a	Sox2_MA0143.3	-20	0	+	0	0	.
chr8	2360696	2360697	chr8:2360697:T:C	rs142952573	T	C	N	Sox2_MA0143.3	15	0	+	0	0	.
chr8	2366535	2366536	chr8:2366536:A:G	rs142627127	A	G	-	Sox2_MA0143.3	-5	0	+	0	0	.
chr8	2513058	2513059	chr8:2513059:G:A	rs4875822	G	A	G	Sox2_MA0143.3	23	0	+	0	0	.
chr8	2630822	2630823	chr8:2630823:T:C	rs11993244	T	C	C	Sox2_MA0143.3	22	0	+	0	0	.
chr8	2724032	2724033	chr8:2724033:A:G	rs17755440	A	G	A	Sox2_MA0143.3	-10	0	-	0	0	.
chr8	2783984	2783985	chr8:2783985:T:C	rs73503009	T	C	C	Sox2_MA0143.3	-12	0	-	0	0	.
chr8	2803532	2803533	chr8:2803533:A:G	rs7830827	A	G	A	Sox2_MA0143.3	9	0	-	0	0	.
chr8	2871960	2871961	chr8:2871961:A:T	rs2924913	A	T	T	Sox2_MA0143.3	25	0	+	0	0	.
chr8	2960339	2960340	chr8:2960340:G:C	rs111508518	G	C	G	Sox2_MA0143.3	12	0	-	0	0	.
chr8	3022807	3022808	chr8:3022808:T:G	rs650219	T	G	T	Sox2_MA0143.3	-5	0	-	0	0	.
chr8	3076226	3076227	chr8:3076227:C:G	rs12678889	C	G	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr8	3085908	3085909	chr8:3085909:C:T	rs75485725	C	T	T	Sox2_MA0143.3	27	0	+	0	0	.
chr8	3112684	3112685	chr8:3112685:C:T	rs56681362	C	T	C	Sox2_MA0143.3	1	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr8	3153867	3153868	chr8:3153868:G:A	rs6987824	G	A	A	Sox2_MA0143.3	-6	0	+	0	0	.
chr8	3177140	3177141	chr8:3177141:A:C	rs10104470	A	C	C	Sox2_MA0143.3	13	0	-	0	0	.
chr8	3180217	3180218	chr8:3180218:A:G	rs750306	A	G	A	Sox2_MA0143.3	-14	0	+	0	0	.
chr8	3353932	3353933	chr8:3353933:A:C	rs924733	A	C	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr8	3386489	3386490	chr8:3386490:C:G	rs905500	C	G	C	Sox2_MA0143.3	18	0	-	0	0	.
chr8	3419069	3419070	chr8:3419070:T:C	rs1553183	T	C	T	Sox2_MA0143.3	3	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr8	3477301	3477302	chr8:3477302:A:G	rs4993698	A	G	G	Sox2_MA0143.3	6	1	-	9.019595766176417	2.110840986861197	CCATTGTC
chr8	3488748	3488749	chr8:3488749:G:C	rs13269764	G	C	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr8	3491885	3491886	chr8:3491886:A:G	rs1532581	A	G	A	Sox2_MA0143.3	-8	0	-	0	0	.
chr8	3491897	3491898	chr8:3491898:G:A	rs1532580	G	A	A	Sox2_MA0143.3	-20	0	-	0	0	.
chr8	3603341	3603342	chr8:3603342:G:A	rs4875751	G	A	A	Sox2_MA0143.3	19	0	-	0	0	.
chr8	3622441	3622442	chr8:3622442:T:G	rs2449226	T	G	T	Sox2_MA0143.3	-15	0	-	0	0	.
chr8	3758940	3758941	chr8:3758941:G:C	rs78457165	G	C	G	Sox2_MA0143.3	1	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr8	3818701	3818702	chr8:3818702:G:C	rs9694214	G	C	C	Sox2_MA0143.3	0	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr8	3837275	3837276	chr8:3837276:T:A	rs10156311	T	A	T	Sox2_MA0143.3	24	0	+	0	0	.
chr8	3981315	3981316	chr8:3981316:G:A	rs115228162	G	A	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr8	4062347	4062348	chr8:4062348:G:C	rs17068827	G	C	G	Sox2_MA0143.3	19	0	-	0	0	.
chr8	4062359	4062360	chr8:4062360:G:C	rs1426282	G	C	G	Sox2_MA0143.3	7	1	-	9.019595766176417	8.676919043985553	CCATTGTC
chr8	4066103	4066104	chr8:4066104:C:G	rs9314509	C	G	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr8	4310197	4310198	chr8:4310198:C:T	rs4875323	C	T	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr8	4331571	4331572	chr8:4331572:G:A	rs117621302	G	A	G	Sox2_MA0143.3	14	0	-	0	0	.
chr8	4449745	4449746	chr8:4449746:G:C	rs58938268	G	C	G	Sox2_MA0143.3	9	0	-	0	0	.
chr8	4525396	4525397	chr8:4525397:C:G	rs17070484	C	G	C	Sox2_MA0143.3	22	0	-	0	0	.
chr8	4582379	4582380	chr8:4582380:G:A	rs115282250	G	A	G	Sox2_MA0143.3	7	1	-	9.206767037375712	9.800647049772198	CCTTTGTC
chr8	4624575	4624576	chr8:4624576:C:T	rs115467963	C	T	C	Sox2_MA0143.3	16	0	-	0	0	.
chr8	4853208	4853209	chr8:4853209:G:T	rs76315001	G	T	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr8	4915823	4915824	chr8:4915824:G:A	rs73507966	G	A	G	Sox2_MA0143.3	18	0	-	0	0	.
chr8	4993238	4993239	chr8:4993239:A:C	rs79785864	A	C	A	Sox2_MA0143.3	-18	0	+	0	0	.
chr8	4993279	4993280	chr8:4993280:G:A	rs35789176	G	A	G	Sox2_MA0143.3	23	0	+	0	0	.
chr8	5159366	5159367	chr8:5159367:A:T	rs75480158	A	T	A	Sox2_MA0143.3	2	1	-	9.206767037375712	9.019595766176417	CCTTTGTC
chr8	5165572	5165573	chr8:5165573:G:A	rs4875460	G	A	G	Sox2_MA0143.3	1	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr8	5224477	5224478	chr8:5224478:G:A	rs61364604	G	A	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr8	5225747	5225748	chr8:5225748:A:G	rs4875465	A	G	A	Sox2_MA0143.3	18	0	-	0	0	.
chr8	5230605	5230606	chr8:5230606:G:T	rs76546879	G	T	G	Sox2_MA0143.3	26	0	-	0	0	.
chr8	5308283	5308284	chr8:5308284:C:T	rs1946161	C	T	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr8	5661506	5661507	chr8:5661507:G:A	rs10503320	G	A	G	Sox2_MA0143.3	17	0	-	0	0	.
chr8	5675280	5675281	chr8:5675281:C:A	chr8:5675281:C:A	C	A	c	Sox2_MA0143.3	16	0	-	0	0	.
chr8	5675303	5675304	chr8:5675304:T:C	rs75064975	T	C	t	Sox2_MA0143.3	-7	0	-	0	0	.
chr8	5683620	5683621	chr8:5683621:C:A	rs2732986	C	A	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr8	5725736	5725737	chr8:5725737:C:T	rs538973570	C	T	-	Sox2_MA0143.3	18	0	-	0	0	.
chr8	5745140	5745141	chr8:5745141:C:G	rs73185676	C	G	C	Sox2_MA0143.3	23	0	+	0	0	.
chr8	5755496	5755497	chr8:5755497:C:T	rs73187704	C	T	a	Sox2_MA0143.3	24	0	-	0	0	.
chr8	5760403	5760404	chr8:5760404:G:A	rs7842974	G	A	G	Sox2_MA0143.3	-12	0	+	0	0	.
chr8	5812680	5812681	chr8:5812681:A:T	rs4875197	A	T	A	Sox2_MA0143.3	20	0	-	0	0	.
chr8	5857287	5857288	chr8:5857288:G:A	rs138893120	G	A	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr8	6302662	6302663	chr8:6302663:C:G	rs34788609	C	G	G	Sox2_MA0143.3	23	0	-	0	0	.
chr8	6302667	6302668	chr8:6302668:G:C	rs35175451	G	C	G	Sox2_MA0143.3	18	0	-	0	0	.
chr8	6302698	6302699	chr8:6302699:C:G	rs34769958	C	G	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr8	6313513	6313514	chr8:6313514:C:T	rs11988047	C	T	C	Sox2_MA0143.3	22	0	+	0	0	.
chr8	6366473	6366474	chr8:6366474:G:C	rs11786052	G	C	G	Sox2_MA0143.3	-2	0	+	0	0	.
chr8	6394792	6394793	chr8:6394793:C:G	rs7008655	C	G	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr8	6455684	6455685	chr8:6455685:C:A	rs2515576	C	A	C	Sox2_MA0143.3	0	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr8	6464112	6464113	chr8:6464113:T:A	rs145968388	T	A	T	Sox2_MA0143.3	19	0	+	0	0	.
chr8	6479366	6479367	chr8:6479367:T:A	rs11987805	T	A	T	Sox2_MA0143.3	11	0	+	0	0	.
chr8	6528588	6528589	chr8:6528589:C:T	rs74344164	C	T	T	Sox2_MA0143.3	-8	0	+	0	0	.
chr8	6528605	6528606	chr8:6528606:G:C	rs2922887	G	C	C	Sox2_MA0143.3	9	0	+	0	0	.
chr8	6570346	6570347	chr8:6570347:C:A	rs2959776	C	A	A	Sox2_MA0143.3	-1	0	+	0	0	.
chr8	6580098	6580099	chr8:6580099:G:T	rs150844323	G	T	G	Sox2_MA0143.3	12	0	-	0	0	.
chr8	6585480	6585481	chr8:6585481:A:G	rs2515530	A	G	G	Sox2_MA0143.3	2	1	+	9.019595766176417	2.900948058900136	CCATTGTC
chr8	6596549	6596550	chr8:6596550:T:C	rs142374289	T	C	T	Sox2_MA0143.3	-3	0	-	0	0	.
chr8	6602666	6602667	chr8:6602667:T:C	rs1975622	T	C	C	Sox2_MA0143.3	27	0	+	0	0	.
chr8	6635678	6635679	chr8:6635679:A:G	rs2980654	A	G	A	Sox2_MA0143.3	-4	0	+	0	0	.
chr8	6648731	6648732	chr8:6648732:C:T	rs117089700	C	T	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr8	6677524	6677525	chr8:6677525:C:T	rs7825811	C	T	T	Sox2_MA0143.3	-19	0	-	0	0	.
chr8	6767313	6767314	chr8:6767314:G:T	rs13264044	G	T	G	Sox2_MA0143.3	19	0	+	0	0	.
chr8	6791076	6791077	chr8:6791077:T:A	rs376941951	T	A	T	Sox2_MA0143.3	-8	0	-	0	0	.
chr8	6802297	6802298	chr8:6802298:A:C	rs2553724	A	C	A	Sox2_MA0143.3	21	0	+	0	0	.
chr8	6816449	6816450	chr8:6816450:C:G	rs71525770	C	G	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr8	6867994	6867995	chr8:6867995:C:G	rs2741112	C	G	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr8	6898297	6898298	chr8:6898298:C:A	rs2741056	C	A	A	Sox2_MA0143.3	-11	0	-	0	0	.
chr8	6922584	6922585	chr8:6922585:G:A	rs2741692	G	A	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr8	6922609	6922610	chr8:6922610:G:A	rs2738126	G	A	G	Sox2_MA0143.3	12	0	+	0	0	.
chr8	6929863	6929864	chr8:6929864:C:G	rs77764628	C	G	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr8	6946327	6946328	chr8:6946328:C:T	rs2981396	C	T	T	Sox2_MA0143.3	27	0	-	0	0	.
chr8	6950359	6950360	chr8:6950360:G:C	rs2738086	G	C	G	Sox2_MA0143.3	15	0	-	0	0	.
chr8	6970815	6970816	chr8:6970816:A:G	rs1044765661	A	G	.	Sox2_MA0143.3	4	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr8	6989934	6989935	chr8:6989935:A:G	rs71277235	A	G	.	Sox2_MA0143.3	24	0	+	0	0	.
chr8	7020029	7020030	chr8:7020030:G:A	rs2615770	G	A	.	Sox2_MA0143.3	-2	0	+	0	0	.
chr8	7025037	7025038	chr8:7025038:C:G	rs934695483	C	G	.	Sox2_MA0143.3	22	0	+	0	0	.
chr8	7296849	7296850	chr8:7296850:T:C	rs147134114	T	C	.	Sox2_MA0143.3	-7	0	-	0	0	.
chr8	7420407	7420408	chr8:7420408:T:C	rs2698832	T	C	T	Sox2_MA0143.3	-2	0	-	0	0	.
chr8	7714483	7714484	chr8:7714484:G:T	rs79297896	G	T	.	Sox2_MA0143.3	24	0	-	0	0	.
chr8	7765166	7765167	chr8:7765167:G:T	rs983941283	G	T	.	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr8	8143572	8143573	chr8:8143573:G:A	rs201237441	G	A	.	Sox2_MA0143.3	7	1	+	8.676919043985553	3.3675628303222993	CCATTGTG
chr8	8143577	8143578	chr8:8143578:T:C	rs78871246	T	C	.	Sox2_MA0143.3	12	0	+	0	0	.
chr8	8169353	8169354	chr8:8169354:G:C	rs200590950	G	C	.	Sox2_MA0143.3	7	1	-	9.206767037375712	8.864090315184848	CCTTTGTC
chr8	8200124	8200125	chr8:8200125:G:T	rs200270396	G	T	.	Sox2_MA0143.3	25	0	+	0	0	.
chr8	8237131	8237132	chr8:8237132:T:C	rs1206769517	T	C	.	Sox2_MA0143.3	-15	0	+	0	0	.
chr8	8237149	8237150	chr8:8237150:T:C	rs73199790	T	C	.	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr8	8316346	8316347	chr8:8316347:G:A	rs56934846	G	A	G	Sox2_MA0143.3	17	0	+	0	0	.
chr8	8317398	8317399	chr8:8317399:C:G	rs1401389	C	G	C	Sox2_MA0143.3	26	0	+	0	0	.
chr8	8324041	8324042	chr8:8324042:A:T	rs2945898	A	T	A	Sox2_MA0143.3	14	0	+	0	0	.
chr8	8358856	8358857	chr8:8358857:A:G	rs995185190	A	G	A	Sox2_MA0143.3	26	0	-	0	0	.
chr8	8375609	8375610	chr8:8375610:G:C	rs4840950	G	C	G	Sox2_MA0143.3	21	0	+	0	0	.
chr8	8375615	8375616	chr8:8375616:G:A	rs4840951	G	A	G	Sox2_MA0143.3	27	0	+	0	0	.
chr8	8376223	8376224	chr8:8376224:C:A	rs192275434	C	A	C	Sox2_MA0143.3	15	0	-	0	0	.
chr8	8440422	8440423	chr8:8440423:T:C	rs2976847	T	C	C	Sox2_MA0143.3	2	1	+	8.864090315184848	2.5582713367092715	CCTTTGTG
chr8	8453810	8453811	chr8:8453811:A:C	rs2976868	A	C	A	Sox2_MA0143.3	9	0	-	0	0	.
chr8	8467175	8467176	chr8:8467176:C:T	rs55817265	C	T	C	Sox2_MA0143.3	20	0	-	0	0	.
chr8	8511279	8511280	chr8:8511280:A:G	rs7012227	A	G	G	Sox2_MA0143.3	2	1	+	8.676919043985553	2.5582713367092715	CCATTGTG
chr8	8523019	8523020	chr8:8523020:T:C	rs7817376	T	C	T	Sox2_MA0143.3	-5	0	-	0	0	.
chr8	8538159	8538160	chr8:8538160:T:C	rs1171570641	T	C	T	Sox2_MA0143.3	21	0	+	0	0	.
chr8	8572176	8572177	chr8:8572177:A:G	rs4840991	A	G	G	Sox2_MA0143.3	20	0	-	0	0	.
chr8	8601409	8601410	chr8:8601410:G:C	rs142137767	G	C	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr8	8687361	8687362	chr8:8687362:G:A	rs6601724	G	A	A	Sox2_MA0143.3	8	0	+	0	0	.
chr8	8717961	8717962	chr8:8717962:T:C	rs13271966	T	C	C	Sox2_MA0143.3	20	0	+	0	0	.
chr8	8736736	8736737	chr8:8736737:G:A	rs575895	G	A	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr8	8736743	8736744	chr8:8736744:C:T	rs575920	C	T	C	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr8	8744118	8744119	chr8:8744119:T:A	rs4841022	T	A	A	Sox2_MA0143.3	-3	0	-	0	0	.
chr8	8744125	8744126	chr8:8744126:C:G	rs4841023	C	G	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr8	8786214	8786215	chr8:8786215:T:A	rs2271341	T	A	A	Sox2_MA0143.3	15	0	-	0	0	.
chr8	8790695	8790696	chr8:8790696:G:A	rs1039911	G	A	G	Sox2_MA0143.3	7	1	+	8.676919043985553	3.3675628303222993	CCATTGTG
chr8	8809408	8809409	chr8:8809409:G:T	rs2175161	G	T	T	Sox2_MA0143.3	23	0	+	0	0	.
chr8	8877778	8877779	chr8:8877779:G:C	rs117217843	G	C	G	Sox2_MA0143.3	1	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr8	8882058	8882059	chr8:8882059:A:C	rs4841062	A	C	C	Sox2_MA0143.3	3	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr8	8888540	8888541	chr8:8888541:A:C	rs10107645	A	C	A	Sox2_MA0143.3	27	0	-	0	0	.
chr8	8904770	8904771	chr8:8904771:A:G	rs28407621	A	G	G	Sox2_MA0143.3	21	0	+	0	0	.
chr8	8918259	8918260	chr8:8918260:A:G	rs446470	A	G	G	Sox2_MA0143.3	6	1	-	8.676919043985553	1.7681642646703326	CCATTGTG
chr8	8923875	8923876	chr8:8923876:T:G	rs6983082	T	G	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr8	8932548	8932549	chr8:8932549:T:A	rs448231	T	A	T	Sox2_MA0143.3	12	0	+	0	0	.
chr8	8942295	8942296	chr8:8942296:C:G	rs73662217	C	G	C	Sox2_MA0143.3	22	0	-	0	0	.
chr8	8954976	8954977	chr8:8954977:G:C	rs77842430	G	C	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr8	8960486	8960487	chr8:8960487:G:C	rs7836156	G	C	g	Sox2_MA0143.3	-12	0	+	0	0	.
chr8	9022979	9022980	chr8:9022980:A:T	rs78550140	A	T	A	Sox2_MA0143.3	-3	0	+	0	0	.
chr8	9023004	9023005	chr8:9023005:T:G	rs74524526	T	G	t	Sox2_MA0143.3	22	0	+	0	0	.
chr8	9079214	9079215	chr8:9079215:A:G	rs6990455	A	G	A	Sox2_MA0143.3	17	0	-	0	0	.
chr8	9079238	9079239	chr8:9079239:A:G	rs6990464	A	G	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr8	9081814	9081815	chr8:9081815:C:T	rs76463912	C	T	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr8	9082524	9082525	chr8:9082525:C:A	rs6601286	C	A	C	Sox2_MA0143.3	19	0	+	0	0	.
chr8	9149738	9149739	chr8:9149739:G:A	rs547370655	G	A	G	Sox2_MA0143.3	21	0	+	0	0	.
chr8	9164752	9164753	chr8:9164753:A:T	rs566224291	A	T	A	Sox2_MA0143.3	-17	0	+	0	0	.
chr8	9188372	9188373	chr8:9188373:A:C	rs79153436	A	C	A	Sox2_MA0143.3	-8	0	-	0	0	.
chr8	9264248	9264249	chr8:9264249:A:G	rs1259539317	A	G	A	Sox2_MA0143.3	-11	0	+	0	0	.
chr8	9317307	9317308	chr8:9317308:G:T	chr8:9317308:G:T	G	T	G	Sox2_MA0143.3	-3	0	+	0	0	.
chr8	9337502	9337503	chr8:9337503:C:T	rs17149817	C	T	C	Sox2_MA0143.3	13	0	-	0	0	.
chr8	9354908	9354909	chr8:9354909:A:G	rs34271262	A	G	A	Sox2_MA0143.3	2	1	+	9.613475778572903	3.494828071296623	CCATTGTT
chr8	9354929	9354930	chr8:9354930:C:T	rs12550519	C	T	T	Sox2_MA0143.3	23	0	+	0	0	.
chr8	9413745	9413746	chr8:9413746:T:A	rs73185254	T	A	T	Sox2_MA0143.3	2	1	-	9.613475778572903	9.800647049772198	CCATTGTT
chr8	9457535	9457536	chr8:9457536:A:C	rs4841153	A	C	A	Sox2_MA0143.3	-14	0	-	0	0	.
chr8	9568903	9568904	chr8:9568904:G:A	rs12676898	G	A	A	Sox2_MA0143.3	-10	0	+	0	0	.
chr8	9568907	9568908	chr8:9568908:T:C	rs12675476	T	C	T	Sox2_MA0143.3	-6	0	+	0	0	.
chr8	9597455	9597456	chr8:9597456:T:C	rs28716954	T	C	T	Sox2_MA0143.3	-8	0	+	0	0	.
chr8	9606226	9606227	chr8:9606227:C:T	rs1038112738	C	T	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr8	9937397	9937398	chr8:9937398:G:A	rs588760	G	A	A	Sox2_MA0143.3	1	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr8	9986443	9986444	chr8:9986444:T:C	rs17737449	T	C	T	Sox2_MA0143.3	26	0	+	0	0	.
chr8	10054825	10054826	chr8:10054826:C:T	rs1004131286	C	T	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr8	10098979	10098980	chr8:10098980:G:A	rs79957172	G	A	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr8	10131150	10131151	chr8:10131151:T:C	rs1484644	T	C	C	Sox2_MA0143.3	13	0	-	0	0	.
chr8	10132863	10132864	chr8:10132864:G:A	rs1531918	G	A	A	Sox2_MA0143.3	-16	0	-	0	0	.
chr8	10152438	10152439	chr8:10152439:C:G	rs11986122	C	G	C	Sox2_MA0143.3	13	0	+	0	0	.
chr8	10152441	10152442	chr8:10152442:G:T	rs11993089	G	T	T	Sox2_MA0143.3	16	0	+	0	0	.
chr8	10167691	10167692	chr8:10167692:T:C	rs17151235	T	C	T	Sox2_MA0143.3	16	0	+	0	0	.
chr8	10220792	10220793	chr8:10220793:G:A	rs11249977	G	A	G	Sox2_MA0143.3	5	1	+	9.206767037375712	2.298012258060492	CCTTTGTC
chr8	10248150	10248151	chr8:10248151:G:A	rs4563888	G	A	G	Sox2_MA0143.3	5	1	+	8.676919043985553	1.7681642646703324	CCATTGTG
chr8	10263511	10263512	chr8:10263512:C:T	rs9650649	C	T	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr8	10265479	10265480	chr8:10265480:G:A	rs185537335	G	A	G	Sox2_MA0143.3	25	0	-	0	0	.
chr8	10265516	10265517	chr8:10265517:C:T	rs12679687	C	T	C	Sox2_MA0143.3	-12	0	-	0	0	.
chr8	10270880	10270881	chr8:10270881:G:A	rs141694432	G	A	G	Sox2_MA0143.3	10	0	-	0	0	.
chr8	10270899	10270900	chr8:10270900:C:T	rs147085807	C	T	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr8	10298783	10298784	chr8:10298784:C:T	rs11249983	C	T	T	Sox2_MA0143.3	-10	0	+	0	0	.
chr8	10327106	10327107	chr8:10327107:G:A	rs34795112	G	A	g	Sox2_MA0143.3	-5	0	+	0	0	.
chr8	10402589	10402590	chr8:10402590:C:T	rs11779205	C	T	c	Sox2_MA0143.3	8	0	-	0	0	.
chr8	10520727	10520728	chr8:10520728:G:A	rs12677569	G	A	g	Sox2_MA0143.3	-5	0	-	0	0	.
chr8	10524954	10524955	chr8:10524955:A:C	rs4240650	A	C	A	Sox2_MA0143.3	-5	0	-	0	0	.
chr8	10524962	10524963	chr8:10524963:G:T	rs4543508	G	T	T	Sox2_MA0143.3	-13	0	-	0	0	.
chr8	10525482	10525483	chr8:10525483:T:G	rs11992361	T	G	T	Sox2_MA0143.3	4	1	+	8.676919043985553	1.7681642646703322	CCATTGTG
chr8	10648602	10648603	chr8:10648603:T:C	rs7463228	T	C	T	Sox2_MA0143.3	-20	0	-	0	0	.
chr8	10770349	10770350	chr8:10770350:G:A	rs7826189	G	A	A	Sox2_MA0143.3	23	0	-	0	0	.
chr8	10789006	10789007	chr8:10789007:T:C	rs7820237	T	C	T	Sox2_MA0143.3	-14	0	+	0	0	.
chr8	10812563	10812564	chr8:10812564:A:G	rs17152520	A	G	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr8	10917651	10917652	chr8:10917652:G:A	rs35746279	G	A	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr8	10943626	10943627	chr8:10943627:A:G	rs7833435	A	G	G	Sox2_MA0143.3	13	0	-	0	0	.
chr8	10958406	10958407	chr8:10958407:A:T	rs10098549	A	T	A	Sox2_MA0143.3	10	0	-	0	0	.
chr8	10958407	10958408	chr8:10958408:G:C	rs113676659	G	C	G	Sox2_MA0143.3	9	0	-	0	0	.
chr8	11017997	11017998	chr8:11017998:C:T	rs114686239	C	T	C	Sox2_MA0143.3	15	0	-	0	0	.
chr8	11053183	11053184	chr8:11053184:T:C	rs559511225	T	C	T	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr8	11164916	11164917	chr8:11164917:A:G	rs11986093	A	G	A	Sox2_MA0143.3	-8	0	-	0	0	.
chr8	11230621	11230622	chr8:11230622:A:G	rs10103062	A	G	A	Sox2_MA0143.3	15	0	-	0	0	.
chr8	11242267	11242268	chr8:11242268:T:G	rs77945559	T	G	T	Sox2_MA0143.3	-19	0	+	0	0	.
chr8	11355853	11355854	chr8:11355854:C:T	rs2060456	C	T	C	Sox2_MA0143.3	27	0	+	0	0	.
chr8	11454689	11454690	chr8:11454690:T:C	rs4841542	T	C	C	Sox2_MA0143.3	25	0	+	0	0	.
chr8	11468327	11468328	chr8:11468328:C:A	rs538929069	C	A	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr8	11472118	11472119	chr8:11472119:T:C	rs187753206	T	C	T	Sox2_MA0143.3	2	1	+	8.864090315184848	2.5582713367092715	CCTTTGTG
chr8	11477732	11477733	chr8:11477733:G:A	rs11775149	G	A	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr8	11477738	11477739	chr8:11477739:G:A	rs11775150	G	A	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr8	11516177	11516178	chr8:11516178:C:A	rs546113032	C	A	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr8	11558087	11558088	chr8:11558088:C:T	rs4841558	C	T	C	Sox2_MA0143.3	9	0	-	0	0	.
chr8	11572261	11572262	chr8:11572262:G:A	rs75100307	G	A	A	Sox2_MA0143.3	20	0	-	0	0	.
chr8	11618635	11618636	chr8:11618636:C:T	rs936549	C	T	C	Sox2_MA0143.3	1	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr8	11658863	11658864	chr8:11658864:A:G	rs4841578	A	G	A	Sox2_MA0143.3	4	1	-	9.800647049772198	2.8918922704569785	CCTTTGTT
chr8	11699546	11699547	chr8:11699547:A:T	rs112275708	A	T	A	Sox2_MA0143.3	21	0	+	0	0	.
chr8	11707683	11707684	chr8:11707684:G:T	rs756612295	G	T	G	Sox2_MA0143.3	13	0	-	0	0	.
chr8	11768291	11768292	chr8:11768292:C:G	rs73663008	C	G	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr8	11768298	11768299	chr8:11768299:C:T	rs17754589	C	T	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr8	11774041	11774042	chr8:11774042:G:C	rs8191555	G	C	g	Sox2_MA0143.3	-13	0	-	0	0	.
chr8	11785949	11785950	chr8:11785950:C:T	rs8191663	C	T	C	Sox2_MA0143.3	25	0	+	0	0	.
chr8	11788399	11788400	chr8:11788400:T:G	rs8191685	T	G	T	Sox2_MA0143.3	-4	0	-	0	0	.
chr8	11798831	11798832	chr8:11798832:C:T	rs56187811	C	T	T	Sox2_MA0143.3	-11	0	-	0	0	.
chr8	11800386	11800387	chr8:11800387:A:G	rs111235618	A	G	A	Sox2_MA0143.3	3	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr8	11802448	11802449	chr8:11802449:A:G	rs183774305	A	G	A	Sox2_MA0143.3	27	0	-	0	0	.
chr8	11802483	11802484	chr8:11802484:C:T	rs760929396	C	T	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr8	11850920	11850921	chr8:11850921:G:A	rs11548596	G	A	G	Sox2_MA0143.3	-2	0	+	0	0	.
chr8	11934552	11934553	chr8:11934553:C:G	rs7815186	C	G	N	Sox2_MA0143.3	-12	0	+	0	0	.
chr8	11977865	11977866	chr8:11977866:G:A	rs7460395	G	A	A	Sox2_MA0143.3	-8	0	-	0	0	.
chr8	11982501	11982502	chr8:11982502:A:G	rs7004833	A	G	.	Sox2_MA0143.3	-20	0	-	0	0	.
chr8	11987163	11987164	chr8:11987164:T:C	rs7461560	T	C	.	Sox2_MA0143.3	23	0	-	0	0	.
chr8	12023251	12023252	chr8:12023252:C:T	rs112005034	C	T	.	Sox2_MA0143.3	1	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr8	12284968	12284969	chr8:12284969:G:A	rs71509194	G	A	.	Sox2_MA0143.3	-2	0	-	0	0	.
chr8	12543883	12543884	chr8:12543884:A:C	rs866892653	A	C	.	Sox2_MA0143.3	-7	0	-	0	0	.
chr8	12546633	12546634	chr8:12546634:A:G	rs71520444	A	G	.	Sox2_MA0143.3	19	0	-	0	0	.
chr8	12580403	12580404	chr8:12580404:C:A	rs10100134	C	A	.	Sox2_MA0143.3	7	1	-	8.676919043985553	9.613475778572903	CCATTGTG
chr8	12757630	12757631	chr8:12757631:G:A	chr8:12757631:G:A	G	A	G	Sox2_MA0143.3	12	0	+	0	0	.
chr8	12773464	12773465	chr8:12773465:C:T	rs7008262	C	T	T	Sox2_MA0143.3	12	0	+	0	0	.
chr8	12856926	12856927	chr8:12856927:C:T	rs4831375	C	T	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr8	12945323	12945324	chr8:12945324:A:G	rs34810026	A	G	A	Sox2_MA0143.3	6	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr8	12972682	12972683	chr8:12972683:T:C	rs10103560	T	C	T	Sox2_MA0143.3	18	0	-	0	0	.
chr8	12973528	12973529	chr8:12973529:G:A	rs6993646	G	A	G	Sox2_MA0143.3	15	0	-	0	0	.
chr8	12976899	12976900	chr8:12976900:T:C	rs12541930	T	C	T	Sox2_MA0143.3	23	0	+	0	0	.
chr8	13050987	13050988	chr8:13050988:T:C	rs4831384	T	C	T	Sox2_MA0143.3	6	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr8	13122469	13122470	chr8:13122470:G:T	rs77674049	G	T	T	Sox2_MA0143.3	-10	0	-	0	0	.
chr8	13224834	13224835	chr8:13224835:C:T	rs151092130	C	T	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr8	13241660	13241661	chr8:13241661:A:G	rs1209990	A	G	A	Sox2_MA0143.3	22	0	-	0	0	.
chr8	13258487	13258488	chr8:13258488:A:G	rs35071137	A	G	G	Sox2_MA0143.3	27	0	-	0	0	.
chr8	13258512	13258513	chr8:13258513:T:C	rs34589459	T	C	T	Sox2_MA0143.3	2	1	-	8.676919043985553	2.5582713367092715	CCATTGTG
chr8	13258525	13258526	chr8:13258526:G:C	rs1188294	G	C	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr8	13325065	13325066	chr8:13325066:C:G	rs191120933	C	G	C	Sox2_MA0143.3	5	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr8	13327723	13327724	chr8:13327724:C:A	rs1671383	C	A	A	Sox2_MA0143.3	21	0	-	0	0	.
chr8	13365194	13365195	chr8:13365195:T:C	rs1729179	T	C	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr8	13365204	13365205	chr8:13365205:A:G	chr8:13365205:A:G	A	G	A	Sox2_MA0143.3	9	0	+	0	0	.
chr8	13371685	13371686	chr8:13371686:G:A	rs1671417	G	A	A	Sox2_MA0143.3	7	1	+	8.676919043985553	3.3675628303222993	CCATTGTG
chr8	13454839	13454840	chr8:13454840:A:G	rs289550	A	G	A	Sox2_MA0143.3	2	1	+	8.676919043985553	2.5582713367092715	CCATTGTG
chr8	13546424	13546425	chr8:13546425:G:A	rs966908	G	A	A	Sox2_MA0143.3	27	0	-	0	0	.
chr8	13550304	13550305	chr8:13550305:A:G	rs12550753	A	G	A	Sox2_MA0143.3	-15	0	+	0	0	.
chr8	13676466	13676467	chr8:13676467:T:G	rs78455287	T	G	T	Sox2_MA0143.3	14	0	-	0	0	.
chr8	13687332	13687333	chr8:13687333:G:A	rs1947916	G	A	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr8	13723805	13723806	chr8:13723806:C:T	rs181877864	C	T	C	Sox2_MA0143.3	24	0	+	0	0	.
chr8	13741826	13741827	chr8:13741827:G:A	rs6989197	G	A	A	Sox2_MA0143.3	23	0	-	0	0	.
chr8	13768237	13768238	chr8:13768238:T:C	rs9325670	T	C	-	Sox2_MA0143.3	2	1	-	9.613475778572903	3.494828071296623	CCATTGTT
chr8	13855390	13855391	chr8:13855391:T:C	rs36072426	T	C	T	Sox2_MA0143.3	-12	0	+	0	0	.
chr8	13876464	13876465	chr8:13876465:G:C	rs7009819	G	C	C	Sox2_MA0143.3	14	0	+	0	0	.
chr8	13877393	13877394	chr8:13877394:T:C	rs13250045	T	C	T	Sox2_MA0143.3	15	0	-	0	0	.
chr8	13932564	13932565	chr8:13932565:G:A	rs1402331	G	A	T	Sox2_MA0143.3	15	0	+	0	0	.
chr8	13934680	13934681	chr8:13934681:A:G	rs3107386	A	G	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr8	14034005	14034006	chr8:14034006:A:C	rs12542095	A	C	C	Sox2_MA0143.3	24	0	+	0	0	.
chr8	14188031	14188032	chr8:14188032:G:T	rs1871098	G	T	N	Sox2_MA0143.3	-19	0	-	0	0	.
chr8	14488391	14488392	chr8:14488392:T:G	rs1461871	T	G	T	Sox2_MA0143.3	-4	0	-	0	0	.
chr8	14531534	14531535	chr8:14531535:C:T	rs11203620	C	T	T	Sox2_MA0143.3	-8	0	-	0	0	.
chr8	14531539	14531540	chr8:14531540:T:C	rs11203621	T	C	T	Sox2_MA0143.3	-13	0	-	0	0	.
chr8	14533996	14533997	chr8:14533997:T:C	rs17119710	T	C	T	Sox2_MA0143.3	25	0	-	0	0	.
chr8	14684674	14684675	chr8:14684675:C:T	rs62493145	C	T	T	Sox2_MA0143.3	-5	0	+	0	0	.
chr8	14723523	14723524	chr8:14723524:C:T	rs879394736	C	T	-	Sox2_MA0143.3	23	0	+	0	0	.
chr8	14768846	14768847	chr8:14768847:T:A	rs10105135	T	A	T	Sox2_MA0143.3	12	0	-	0	0	.
chr8	15169101	15169102	chr8:15169102:A:G	rs10097372	A	G	G	Sox2_MA0143.3	7	1	-	9.613475778572903	9.019595766176417	CCATTGTT
chr8	15207960	15207961	chr8:15207961:G:T	rs10096451	G	T	T	Sox2_MA0143.3	-7	0	+	0	0	.
chr8	15361314	15361315	chr8:15361315:A:T	rs7844796	A	T	A	Sox2_MA0143.3	-10	0	+	0	0	.
chr8	15406160	15406161	chr8:15406161:G:C	rs10217102	G	C	C	Sox2_MA0143.3	20	0	-	0	0	.
chr8	15494164	15494165	chr8:15494165:T:C	rs62502461	T	C	T	Sox2_MA0143.3	4	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr8	15752233	15752234	chr8:15752234:G:A	rs352791	G	A	A	Sox2_MA0143.3	-19	0	-	0	0	.
chr8	15789347	15789348	chr8:15789348:C:T	rs1421247	C	T	C	Sox2_MA0143.3	26	0	-	0	0	.
chr8	15828613	15828614	chr8:15828614:G:C	rs17613471	G	C	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr8	15830174	15830175	chr8:15830175:C:T	rs75383993	C	T	t	Sox2_MA0143.3	-20	0	+	0	0	.
chr8	15925960	15925961	chr8:15925961:A:G	rs11785005	A	G	A	Sox2_MA0143.3	27	0	+	0	0	.
chr8	15926209	15926210	chr8:15926210:T:A	rs13264447	T	A	T	Sox2_MA0143.3	3	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr8	15991127	15991128	chr8:15991128:A:C	rs78207280	A	C	A	Sox2_MA0143.3	22	0	+	0	0	.
chr8	16014935	16014936	chr8:16014936:A:G	rs73667568	A	G	A	Sox2_MA0143.3	-11	0	+	0	0	.
chr8	16086661	16086662	chr8:16086662:T:C	rs79382796	T	C	T	Sox2_MA0143.3	3	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr8	16086797	16086798	chr8:16086798:T:C	rs1872342	T	C	T	Sox2_MA0143.3	-16	0	-	0	0	.
chr8	16099748	16099749	chr8:16099749:A:G	rs557825711	A	G	A	Sox2_MA0143.3	-17	0	+	0	0	.
chr8	16202416	16202417	chr8:16202417:G:A	rs7815674	G	A	G	Sox2_MA0143.3	11	0	+	0	0	.
chr8	16448830	16448831	chr8:16448831:T:G	rs34315820	T	G	T	Sox2_MA0143.3	18	0	+	0	0	.
chr8	16695555	16695556	chr8:16695556:T:C	rs7837554	T	C	T	Sox2_MA0143.3	-9	0	+	0	0	.
chr8	16717712	16717713	chr8:16717713:C:A	rs822236	C	A	A	Sox2_MA0143.3	8	0	-	0	0	.
chr8	16762424	16762425	chr8:16762425:G:A	rs77772252	G	A	G	Sox2_MA0143.3	11	0	+	0	0	.
chr8	16762425	16762426	chr8:16762426:C:T	rs75941264	C	T	C	Sox2_MA0143.3	12	0	+	0	0	.
chr8	16779892	16779893	chr8:16779893:G:A	rs78269270	G	A	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr8	16824191	16824192	chr8:16824192:T:C	rs1717322	T	C	T	Sox2_MA0143.3	9	0	+	0	0	.
chr8	16837908	16837909	chr8:16837909:C:T	rs1717289	C	T	T	Sox2_MA0143.3	-19	0	-	0	0	.
chr8	16839150	16839151	chr8:16839151:T:C	rs589518	T	C	T	Sox2_MA0143.3	8	0	-	0	0	.
chr8	16911243	16911244	chr8:16911244:A:G	rs73203667	A	G	A	Sox2_MA0143.3	3	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr8	17024394	17024395	chr8:17024395:C:G	rs79432701	C	G	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr8	17185929	17185930	chr8:17185930:T:C	rs34728149	T	C	T	Sox2_MA0143.3	6	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr8	17233458	17233459	chr8:17233459:G:A	rs7828439	G	A	G	Sox2_MA0143.3	8	0	+	0	0	.
chr8	17332446	17332447	chr8:17332447:T:C	rs73552083	T	C	T	Sox2_MA0143.3	-1	0	-	0	0	.
chr8	17386541	17386542	chr8:17386542:T:C	rs4921768	T	C	T	Sox2_MA0143.3	-8	0	-	0	0	.
chr8	17406315	17406316	chr8:17406316:A:G	rs78739229	A	G	A	Sox2_MA0143.3	14	0	-	0	0	.
chr8	17410018	17410019	chr8:17410019:T:C	rs13263074	T	C	T	Sox2_MA0143.3	24	0	-	0	0	.
chr8	17410059	17410060	chr8:17410060:C:T	rs13254505	C	T	T	Sox2_MA0143.3	-17	0	-	0	0	.
chr8	17414076	17414077	chr8:17414077:C:T	rs6587047	C	T	T	Sox2_MA0143.3	10	0	+	0	0	.
chr8	17488668	17488669	chr8:17488669:T:C	rs576009366	T	C	T	Sox2_MA0143.3	4	1	+	3.5547341015215945	-3.3540206777936254	CCTTTGTA
chr8	17578681	17578682	chr8:17578682:C:G	rs2720574	C	G	C	Sox2_MA0143.3	22	0	+	0	0	.
chr8	17610144	17610145	chr8:17610145:C:A	rs3862081	C	A	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr8	17611456	17611457	chr8:17611457:C:T	rs17689517	C	T	T	Sox2_MA0143.3	12	0	-	0	0	.
chr8	17613370	17613371	chr8:17613371:T:C	rs115170115	T	C	T	Sox2_MA0143.3	24	0	+	0	0	.
chr8	17616654	17616655	chr8:17616655:G:C	rs2588113	G	C	G	Sox2_MA0143.3	5	1	+	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr8	17641726	17641727	chr8:17641727:G:A	rs11782715	G	A	G	Sox2_MA0143.3	22	0	+	0	0	.
chr8	17651827	17651828	chr8:17651828:C:T	rs989139388	C	T	C	Sox2_MA0143.3	11	0	+	0	0	.
chr8	17660085	17660086	chr8:17660086:T:C	rs73200130	T	C	T	Sox2_MA0143.3	3	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr8	17660097	17660098	chr8:17660098:T:C	rs112129355	T	C	t	Sox2_MA0143.3	15	0	+	0	0	.
chr8	17693552	17693553	chr8:17693553:C:T	rs209972	C	T	T	Sox2_MA0143.3	1	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr8	17696077	17696078	chr8:17696078:T:C	rs372631	T	C	T	Sox2_MA0143.3	9	0	+	0	0	.
chr8	17836843	17836844	chr8:17836844:A:G	rs17125630	A	G	A	Sox2_MA0143.3	12	0	-	0	0	.
chr8	17850928	17850929	chr8:17850929:A:T	rs117860086	A	T	A	Sox2_MA0143.3	6	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr8	17864474	17864475	chr8:17864475:T:C	rs1016	T	C	T	Sox2_MA0143.3	-14	0	-	0	0	.
chr8	17864666	17864667	chr8:17864667:C:T	rs1386912833	C	T	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr8	17885510	17885511	chr8:17885511:G:A	rs484373	G	A	A	Sox2_MA0143.3	5	1	+	9.019595766176417	2.110840986861197	CCATTGTC
chr8	17907813	17907814	chr8:17907814:C:G	rs116937131	C	G	C	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr8	17907829	17907830	chr8:17907830:C:G	rs187652217	C	G	C	Sox2_MA0143.3	16	0	+	0	0	.
chr8	17912844	17912845	chr8:17912845:T:C	rs78246630	T	C	T	Sox2_MA0143.3	-10	0	+	0	0	.
chr8	17912866	17912867	chr8:17912867:T:C	rs7009476	T	C	T	Sox2_MA0143.3	12	0	+	0	0	.
chr8	17963419	17963420	chr8:17963420:C:T	rs208057	C	T	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr8	18088308	18088309	chr8:18088309:A:G	rs11203935	A	G	A	Sox2_MA0143.3	23	0	-	0	0	.
chr8	18121671	18121672	chr8:18121672:A:G	rs6995047	A	G	G	Sox2_MA0143.3	23	0	-	0	0	.
chr8	18317871	18317872	chr8:18317872:G:T	rs563842804	G	T	G	Sox2_MA0143.3	0	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr8	18318503	18318504	chr8:18318504:T:C	rs13262686	T	C	T	Sox2_MA0143.3	6	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr8	18554931	18554932	chr8:18554932:G:A	rs73209798	G	A	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr8	18559946	18559947	chr8:18559947:C:T	rs2260754	C	T	T	Sox2_MA0143.3	-7	0	-	0	0	.
chr8	18643183	18643184	chr8:18643184:G:T	rs75200128	G	T	G	Sox2_MA0143.3	11	0	+	0	0	.
chr8	18659733	18659734	chr8:18659734:T:C	rs7824710	T	C	C	Sox2_MA0143.3	7	1	+	9.800647049772198	9.206767037375712	CCTTTGTT
chr8	18703205	18703206	chr8:18703206:A:G	rs62495797	A	G	A	Sox2_MA0143.3	21	0	-	0	0	.
chr8	18788922	18788923	chr8:18788923:C:T	rs335247	C	T	T	Sox2_MA0143.3	-19	0	+	0	0	.
chr8	18788938	18788939	chr8:18788939:G:A	rs7000512	G	A	G	Sox2_MA0143.3	-3	0	+	0	0	.
chr8	18850360	18850361	chr8:18850361:A:G	rs7833787	A	G	A	Sox2_MA0143.3	9	0	-	0	0	.
chr8	18850367	18850368	chr8:18850368:T:C	rs17127314	T	C	T	Sox2_MA0143.3	2	1	-	9.613475778572903	3.494828071296623	CCATTGTT
chr8	18855637	18855638	chr8:18855638:C:T	rs1492289	C	T	C	Sox2_MA0143.3	7	1	-	8.676919043985553	3.3675628303222993	CCATTGTG
chr8	18863289	18863290	chr8:18863290:G:A	rs73666741	G	A	G	Sox2_MA0143.3	23	0	-	0	0	.
chr8	18924536	18924537	chr8:18924537:C:T	rs4921617	C	T	T	Sox2_MA0143.3	-17	0	+	0	0	.
chr8	18956789	18956790	chr8:18956790:A:G	rs61363834	A	G	A	Sox2_MA0143.3	7	1	-	9.800647049772198	9.206767037375712	CCTTTGTT
chr8	18958349	18958350	chr8:18958350:T:A	rs17468996	T	A	T	Sox2_MA0143.3	6	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr8	18964176	18964177	chr8:18964177:C:T	rs11204008	C	T	T	Sox2_MA0143.3	7	1	-	8.676919043985553	3.3675628303222993	CCATTGTG
chr8	18988657	18988658	chr8:18988658:T:C	rs144588839	T	C	T	Sox2_MA0143.3	3	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr8	18989132	18989133	chr8:18989133:A:G	rs13274730	A	G	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr8	18990430	18990431	chr8:18990431:A:G	rs2059659	A	G	A	Sox2_MA0143.3	2	1	+	8.676919043985553	2.5582713367092715	CCATTGTG
chr8	19085587	19085588	chr8:19085588:T:C	rs2410602	T	C	T	Sox2_MA0143.3	12	0	+	0	0	.
chr8	19150272	19150273	chr8:19150273:A:C	rs11775805	A	C	C	Sox2_MA0143.3	4	1	-	3.5547341015215945	-3.3540206777936254	CCTTTGTA
chr8	19210067	19210068	chr8:19210068:A:G	rs17127976	A	G	A	Sox2_MA0143.3	13	0	-	0	0	.
chr8	19286902	19286903	chr8:19286903:A:G	rs7831738	A	G	A	Sox2_MA0143.3	-6	0	-	0	0	.
chr8	19378013	19378014	chr8:19378014:C:G	rs10095504	C	G	c	Sox2_MA0143.3	-4	0	-	0	0	.
chr8	19384458	19384459	chr8:19384459:A:G	rs1320326	A	G	T	Sox2_MA0143.3	15	0	+	0	0	.
chr8	19415500	19415501	chr8:19415501:C:A	rs10102696	C	A	C	Sox2_MA0143.3	5	1	-	9.613475778572903	2.7047209992576837	CCATTGTT
chr8	19418340	19418341	chr8:19418341:G:A	rs4633071	G	A	G	Sox2_MA0143.3	23	0	+	0	0	.
chr8	19473322	19473323	chr8:19473323:G:A	rs7839041	G	A	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr8	19496815	19496816	chr8:19496816:T:C	rs28715327	T	C	T	Sox2_MA0143.3	6	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr8	19665730	19665731	chr8:19665731:C:T	rs184990139	C	T	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr8	19666121	19666122	chr8:19666122:C:T	chr8:19666122:C:T	C	T	C	Sox2_MA0143.3	9	0	+	0	0	.
chr8	19695712	19695713	chr8:19695713:G:C	rs6992467	G	C	G	Sox2_MA0143.3	-16	0	-	0	0	.
chr8	19821455	19821456	chr8:19821456:C:T	rs6981306	C	T	T	Sox2_MA0143.3	27	0	+	0	0	.
chr8	19857724	19857725	chr8:19857725:A:G	rs6586872	A	G	A	Sox2_MA0143.3	-3	0	-	0	0	.
chr8	19875594	19875595	chr8:19875595:T:C	rs10098182	T	C	T	Sox2_MA0143.3	-4	0	+	0	0	.
chr8	19936970	19936971	chr8:19936971:T:C	chr8:19936971:T:C	T	C	T	Sox2_MA0143.3	12	0	-	0	0	.
chr8	19951225	19951226	chr8:19951226:G:A	rs7002728	G	A	G	Sox2_MA0143.3	-5	0	+	0	0	.
chr8	19968861	19968862	chr8:19968862:G:A	rs2197089	G	A	A	Sox2_MA0143.3	-14	0	+	0	0	.
chr8	20059198	20059199	chr8:20059199:C:T	rs7845015	C	T	T	Sox2_MA0143.3	-4	0	+	0	0	.
chr8	20079175	20079176	chr8:20079176:A:G	rs28597716	A	G	a	Sox2_MA0143.3	23	0	+	0	0	.
chr8	20105648	20105649	chr8:20105649:G:C	rs191518275	G	C	G	Sox2_MA0143.3	7	1	-	9.206767037375712	8.864090315184848	CCTTTGTC
chr8	20183200	20183201	chr8:20183201:T:C	rs1390939	T	C	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr8	20203965	20203966	chr8:20203966:A:C	rs17092154	A	C	A	Sox2_MA0143.3	-14	0	+	0	0	.
chr8	20255439	20255440	chr8:20255440:G:C	rs190458112	G	C	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr8	20255448	20255449	chr8:20255449:G:A	rs367950216	G	A	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr8	20272141	20272142	chr8:20272142:A:G	rs11784923	A	G	A	Sox2_MA0143.3	3	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr8	20272144	20272145	chr8:20272145:G:A	rs2410640	G	A	A	Sox2_MA0143.3	0	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr8	20272454	20272455	chr8:20272455:A:G	rs729360	A	G	A	Sox2_MA0143.3	-14	0	+	0	0	.
chr8	20272483	20272484	chr8:20272484:C:T	rs729361	C	T	T	Sox2_MA0143.3	15	0	+	0	0	.
chr8	20275715	20275716	chr8:20275716:C:T	rs57092179	C	T	T	Sox2_MA0143.3	11	0	+	0	0	.
chr8	20282632	20282633	chr8:20282633:C:G	rs11997874	C	G	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr8	20304085	20304086	chr8:20304086:G:C	rs536876004	G	C	G	Sox2_MA0143.3	-5	0	+	0	0	.
chr8	20306546	20306547	chr8:20306547:G:T	rs145736521	G	T	G	Sox2_MA0143.3	9	0	+	0	0	.
chr8	20311257	20311258	chr8:20311258:T:C	rs3988298	T	C	C	Sox2_MA0143.3	11	0	-	0	0	.
chr8	20437645	20437646	chr8:20437646:G:C	rs6586914	G	C	C	Sox2_MA0143.3	7	1	+	8.864090315184848	9.206767037375712	CCTTTGTG
chr8	20483467	20483468	chr8:20483468:G:A	rs9325869	G	A	A	Sox2_MA0143.3	11	0	-	0	0	.
chr8	20543695	20543696	chr8:20543696:G:A	rs17092765	G	A	A	Sox2_MA0143.3	-17	0	+	0	0	.
chr8	20596293	20596294	chr8:20596294:C:T	rs17092813	C	T	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr8	20686872	20686873	chr8:20686873:T:A	rs13273200	T	A	T	Sox2_MA0143.3	3	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr8	20737706	20737707	chr8:20737707:C:A	rs6984510	C	A	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr8	20737744	20737745	chr8:20737745:C:G	rs73626556	C	G	G	Sox2_MA0143.3	26	0	+	0	0	.
chr8	20766517	20766518	chr8:20766518:G:T	rs28455003	G	T	G	Sox2_MA0143.3	-12	0	+	0	0	.
chr8	20924174	20924175	chr8:20924175:A:G	rs4961408	A	G	a	Sox2_MA0143.3	-20	0	-	0	0	.
chr8	20952682	20952683	chr8:20952683:C:A	rs510395	C	A	A	Sox2_MA0143.3	-4	0	+	0	0	.
chr8	20963152	20963153	chr8:20963153:C:A	rs496494	C	A	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr8	20972581	20972582	chr8:20972582:C:A	rs77487521	C	A	C	Sox2_MA0143.3	18	0	-	0	0	.
chr8	21007651	21007652	chr8:21007652:G:A	rs1521456	G	A	A	Sox2_MA0143.3	-7	0	-	0	0	.
chr8	21115292	21115293	chr8:21115293:G:T	rs73211392	G	T	G	Sox2_MA0143.3	1	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr8	21127022	21127023	chr8:21127023:G:A	rs117384912	G	A	G	Sox2_MA0143.3	19	0	+	0	0	.
chr8	21166106	21166107	chr8:21166107:C:T	rs9942803	C	T	C	Sox2_MA0143.3	21	0	+	0	0	.
chr8	21177339	21177340	chr8:21177340:A:T	rs1023899	A	T	A	Sox2_MA0143.3	27	0	+	0	0	.
chr8	21180566	21180567	chr8:21180567:T:A	rs17578359	T	A	T	Sox2_MA0143.3	20	0	-	0	0	.
chr8	21262105	21262106	chr8:21262106:T:G	rs10101710	T	G	T	Sox2_MA0143.3	20	0	-	0	0	.
chr8	21348453	21348454	chr8:21348454:G:A	rs79359747	G	A	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr8	21418363	21418364	chr8:21418364:A:T	rs13252037	A	T	T	Sox2_MA0143.3	13	0	-	0	0	.
chr8	21508481	21508482	chr8:21508482:C:T	rs11783083	C	T	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr8	21585998	21585999	chr8:21585999:T:G	rs9918798	T	G	g	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr8	21624353	21624354	chr8:21624354:A:C	rs17094329	A	C	A	Sox2_MA0143.3	-15	0	+	0	0	.
chr8	21674776	21674777	chr8:21674777:A:G	rs144008406	A	G	A	Sox2_MA0143.3	21	0	-	0	0	.
chr8	21675375	21675376	chr8:21675376:G:A	rs73672818	G	A	G	Sox2_MA0143.3	21	0	+	0	0	.
chr8	21696044	21696045	chr8:21696045:C:T	rs60544386	C	T	C	Sox2_MA0143.3	0	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr8	21712171	21712172	chr8:21712172:G:A	rs7386338	G	A	-	Sox2_MA0143.3	13	0	+	0	0	.
chr8	21716425	21716426	chr8:21716426:G:A	rs4477011	G	A	G	Sox2_MA0143.3	26	0	-	0	0	.
chr8	21716446	21716447	chr8:21716447:C:T	rs4464960	C	T	C	Sox2_MA0143.3	5	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr8	21793480	21793481	chr8:21793481:C:T	rs7816436	C	T	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr8	21816182	21816183	chr8:21816183:C:T	rs7013204	C	T	T	Sox2_MA0143.3	12	0	+	0	0	.
chr8	21897219	21897220	chr8:21897220:C:A	rs141173889	C	A	C	Sox2_MA0143.3	26	0	-	0	0	.
chr8	22038326	22038327	chr8:22038327:A:G	rs34539595	A	G	G	Sox2_MA0143.3	2	1	-	9.800647049772198	3.494828071296623	CCTTTGTT
chr8	22109837	22109838	chr8:22109838:G:A	rs7831322	G	A	g	Sox2_MA0143.3	-8	0	-	0	0	.
chr8	22131660	22131661	chr8:22131661:T:G	rs28384266	T	G	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr8	22232749	22232750	chr8:22232750:T:G	rs3888282	T	G	T	Sox2_MA0143.3	11	0	-	0	0	.
chr8	22389638	22389639	chr8:22389639:T:C	rs61313395	T	C	t	Sox2_MA0143.3	-10	0	-	0	0	.
chr8	22554265	22554266	chr8:22554266:G:A	rs184452376	G	A	G	Sox2_MA0143.3	20	0	+	0	0	.
chr8	22557380	22557381	chr8:22557381:T:C	rs2469765	T	C	C	Sox2_MA0143.3	4	1	+	8.864090315184848	1.9553355358696274	CCTTTGTG
chr8	22561061	22561062	chr8:22561062:G:T	rs1050472957	G	T	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr8	22581928	22581929	chr8:22581929:G:A	rs4872512	G	A	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr8	22586615	22586616	chr8:22586616:C:G	rs1038310	C	G	G	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr8	22594174	22594175	chr8:22594175:G:C	rs3064	G	C	C	Sox2_MA0143.3	11	0	+	0	0	.
chr8	22666427	22666428	chr8:22666428:A:G	rs59560179	A	G	A	Sox2_MA0143.3	-9	0	-	0	0	.
chr8	22694015	22694016	chr8:22694016:G:A	rs1184005764	G	A	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr8	22816202	22816203	chr8:22816203:T:C	rs10503720	T	C	C	Sox2_MA0143.3	14	0	+	0	0	.
chr8	22899006	22899007	chr8:22899007:C:T	rs62492982	C	T	C	Sox2_MA0143.3	0	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr8	22912253	22912254	chr8:22912254:G:A	rs7014952	G	A	A	Sox2_MA0143.3	16	0	-	0	0	.
chr8	22912254	22912255	chr8:22912255:A:G	rs6997691	A	G	A	Sox2_MA0143.3	15	0	-	0	0	.
chr8	22912871	22912872	chr8:22912872:C:T	rs17088769	C	T	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr8	22931908	22931909	chr8:22931909:A:G	rs7005993	A	G	G	Sox2_MA0143.3	-5	0	+	0	0	.
chr8	22953905	22953906	chr8:22953906:G:A	rs2430786	G	A	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr8	22985158	22985159	chr8:22985159:G:A	rs12155842	G	A	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr8	23026676	23026677	chr8:23026677:T:C	rs1016322602	T	C	T	Sox2_MA0143.3	-14	0	+	0	0	.
chr8	23026717	23026718	chr8:23026718:T:C	rs17088895	T	C	T	Sox2_MA0143.3	27	0	+	0	0	.
chr8	23027639	23027640	chr8:23027640:G:A	rs2293402	G	A	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr8	23027640	23027641	chr8:23027641:G:A	rs1105945	G	A	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr8	23137810	23137811	chr8:23137811:C:T	rs78341389	C	T	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr8	23146742	23146743	chr8:23146743:C:G	rs59950769	C	G	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr8	23272730	23272731	chr8:23272731:A:T	rs72500160	A	T	A	Sox2_MA0143.3	7	1	+	3.5547341015215945	9.800647049772198	CCTTTGTA
chr8	23275500	23275501	chr8:23275501:A:G	rs117628636	A	G	A	Sox2_MA0143.3	-20	0	-	0	0	.
chr8	23335567	23335568	chr8:23335568:G:C	rs56216025	G	C	G	Sox2_MA0143.3	26	0	-	0	0	.
chr8	23335795	23335796	chr8:23335796:A:C	rs17089124	A	C	A	Sox2_MA0143.3	10	0	+	0	0	.
chr8	23363324	23363325	chr8:23363325:C:T	rs146057062	C	T	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr8	23490362	23490363	chr8:23490363:C:G	rs17089293	C	G	C	Sox2_MA0143.3	0	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr8	23554068	23554069	chr8:23554069:T:G	rs2978471	T	G	G	Sox2_MA0143.3	27	0	+	0	0	.
chr8	23567966	23567967	chr8:23567967:G:A	rs531757549	G	A	G	Sox2_MA0143.3	1	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr8	23569296	23569297	chr8:23569297:T:C	rs2928684	T	C	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr8	23581461	23581462	chr8:23581462:A:G	rs2928679	A	G	A	Sox2_MA0143.3	15	0	-	0	0	.
chr8	23594193	23594194	chr8:23594194:T:C	rs73216704	T	C	T	Sox2_MA0143.3	-19	0	+	0	0	.
chr8	23594234	23594235	chr8:23594235:T:G	rs73216705	T	G	T	Sox2_MA0143.3	22	0	+	0	0	.
chr8	23600463	23600464	chr8:23600464:C:T	rs62501649	C	T	C	Sox2_MA0143.3	26	0	+	0	0	.
chr8	23600464	23600465	chr8:23600465:G:A	rs113076949	G	A	G	Sox2_MA0143.3	27	0	+	0	0	.
chr8	23608952	23608953	chr8:23608953:T:C	rs1858401	T	C	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr8	23705176	23705177	chr8:23705177:T:G	rs139802404	T	G	T	Sox2_MA0143.3	26	0	+	0	0	.
chr8	23755537	23755538	chr8:23755538:C:G	chr8:23755538:C:G	C	G	C	Sox2_MA0143.3	22	0	-	0	0	.
chr8	23755557	23755558	chr8:23755558:T:C	rs114451069	T	C	T	Sox2_MA0143.3	2	1	-	8.676919043985553	2.5582713367092715	CCATTGTG
chr8	23906329	23906330	chr8:23906330:C:T	rs35162408	C	T	C	Sox2_MA0143.3	8	0	+	0	0	.
chr8	23908805	23908806	chr8:23908806:G:A	rs1731274	G	A	A	Sox2_MA0143.3	-15	0	-	0	0	.
chr8	24039377	24039378	chr8:24039378:C:T	rs143925865	C	T	C	Sox2_MA0143.3	25	0	+	0	0	.
chr8	24156239	24156240	chr8:24156240:A:G	rs62501191	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr8	24221833	24221834	chr8:24221834:C:T	rs80197855	C	T	C	Sox2_MA0143.3	0	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr8	24293976	24293977	chr8:24293977:T:C	rs1423139593	T	C	T	Sox2_MA0143.3	7	1	+	9.613475778572903	9.019595766176417	CCATTGTT
chr8	24349885	24349886	chr8:24349886:G:C	rs7829944	G	C	G	Sox2_MA0143.3	16	0	+	0	0	.
chr8	24616703	24616704	chr8:24616704:T:A	chr8:24616704:T:A	T	A	T	Sox2_MA0143.3	-18	0	+	0	0	.
chr8	24706899	24706900	chr8:24706900:G:A	rs17052420	G	A	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr8	24762659	24762660	chr8:24762660:C:A	rs68112341	C	A	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr8	24768274	24768275	chr8:24768275:G:A	rs4872263	G	A	A	Sox2_MA0143.3	-8	0	+	0	0	.
chr8	24879373	24879374	chr8:24879374:C:T	rs196885	C	T	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr8	24975815	24975816	chr8:24975816:C:T	rs75518866	C	T	T	Sox2_MA0143.3	24	0	-	0	0	.
chr8	24999022	24999023	chr8:24999023:T:C	rs2950323	T	C	T	Sox2_MA0143.3	-14	0	+	0	0	.
chr8	25219461	25219462	chr8:25219462:C:G	rs6983545	C	G	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr8	25390070	25390071	chr8:25390071:G:T	rs1000798	G	T	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr8	25411585	25411586	chr8:25411586:C:A	rs1506869	C	A	C	Sox2_MA0143.3	23	0	+	0	0	.
chr8	25422908	25422909	chr8:25422909:T:C	rs76986108	T	C	T	Sox2_MA0143.3	4	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr8	25480074	25480075	chr8:25480075:G:A	rs142322892	G	A	G	Sox2_MA0143.3	12	0	+	0	0	.
chr8	25737748	25737749	chr8:25737749:T:C	rs1425726	T	C	C	Sox2_MA0143.3	-5	0	-	0	0	.
chr8	25769652	25769653	chr8:25769653:G:A	rs1834440	G	A	A	Sox2_MA0143.3	-16	0	-	0	0	.
chr8	25847541	25847542	chr8:25847542:C:T	rs4288384	C	T	C	Sox2_MA0143.3	23	0	+	0	0	.
chr8	25870657	25870658	chr8:25870658:A:G	rs7814719	A	G	A	Sox2_MA0143.3	26	0	+	0	0	.
chr8	25914476	25914477	chr8:25914477:C:A	rs117105043	C	A	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr8	25918810	25918811	chr8:25918811:G:A	rs1564917	G	A	G	Sox2_MA0143.3	13	0	+	0	0	.
chr8	25963069	25963070	chr8:25963070:T:G	rs1485735	T	G	G	Sox2_MA0143.3	9	0	+	0	0	.
chr8	25986229	25986230	chr8:25986230:C:T	rs60433063	C	T	C	Sox2_MA0143.3	12	0	+	0	0	.
chr8	25986903	25986904	chr8:25986904:T:C	rs7005435	T	C	T	Sox2_MA0143.3	-2	0	-	0	0	.
chr8	25986918	25986919	chr8:25986919:A:T	rs7001438	A	T	A	Sox2_MA0143.3	-17	0	-	0	0	.
chr8	26035167	26035168	chr8:26035168:G:A	rs13256044	G	A	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr8	26038488	26038489	chr8:26038489:G:T	rs7841445	G	T	G	Sox2_MA0143.3	20	0	-	0	0	.
chr8	26061958	26061959	chr8:26061959:G:C	rs62499147	G	C	G	Sox2_MA0143.3	25	0	-	0	0	.
chr8	26061998	26061999	chr8:26061999:T:C	rs62499148	T	C	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr8	26109380	26109381	chr8:26109381:C:T	rs79428543	C	T	T	Sox2_MA0143.3	-11	0	+	0	0	.
chr8	26109409	26109410	chr8:26109410:A:G	rs2976302	A	G	A	Sox2_MA0143.3	18	0	+	0	0	.
chr8	26170325	26170326	chr8:26170326:G:A	rs2952020	G	A	A	Sox2_MA0143.3	17	0	+	0	0	.
chr8	26174723	26174724	chr8:26174724:A:G	rs2952024	A	G	A	Sox2_MA0143.3	-19	0	-	0	0	.
chr8	26202156	26202157	chr8:26202157:C:T	rs12674998	C	T	T	Sox2_MA0143.3	19	0	-	0	0	.
chr8	26241022	26241023	chr8:26241023:C:T	rs2704067	C	T	C	Sox2_MA0143.3	5	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr8	26248493	26248494	chr8:26248494:T:C	rs6557903	T	C	C	Sox2_MA0143.3	6	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr8	26271825	26271826	chr8:26271826:C:A	rs73558751	C	A	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr8	26374080	26374081	chr8:26374081:G:A	rs71517887	G	A	G	Sox2_MA0143.3	-14	0	+	0	0	.
chr8	26374085	26374086	chr8:26374086:A:G	rs114191837	A	G	A	Sox2_MA0143.3	-9	0	+	0	0	.
chr8	26374092	26374093	chr8:26374093:C:T	rs62490967	C	T	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr8	26382653	26382654	chr8:26382654:G:A	rs141508709	G	A	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr8	26383738	26383739	chr8:26383739:C:A	rs139715296	C	A	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr8	26385165	26385166	chr8:26385166:C:T	rs117438717	C	T	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr8	26439840	26439841	chr8:26439841:T:C	rs6998529	T	C	T	Sox2_MA0143.3	14	0	+	0	0	.
chr8	26483899	26483900	chr8:26483900:G:T	rs60373916	G	T	G	Sox2_MA0143.3	18	0	+	0	0	.
chr8	26569801	26569802	chr8:26569802:G:T	rs11778187	G	T	G	Sox2_MA0143.3	21	0	-	0	0	.
chr8	26573949	26573950	chr8:26573950:G:A	rs401004	G	A	G	Sox2_MA0143.3	11	0	+	0	0	.
chr8	26609343	26609344	chr8:26609344:C:A	rs11775967	C	A	A	Sox2_MA0143.3	-18	0	-	0	0	.
chr8	26661234	26661235	chr8:26661235:T:G	rs7845740	T	G	G	Sox2_MA0143.3	8	0	-	0	0	.
chr8	26771247	26771248	chr8:26771248:T:C	rs13277287	T	C	T	Sox2_MA0143.3	-15	0	+	0	0	.
chr8	26773219	26773220	chr8:26773220:C:T	rs937351	C	T	T	Sox2_MA0143.3	23	0	+	0	0	.
chr8	26849387	26849388	chr8:26849388:A:G	rs539144	A	G	a	Sox2_MA0143.3	4	1	-	9.206767037375712	2.2980122580604916	CCTTTGTC
chr8	26901551	26901552	chr8:26901552:A:G	rs76915259	A	G	A	Sox2_MA0143.3	-6	0	+	0	0	.
chr8	27232229	27232230	chr8:27232230:T:C	rs11783299	T	C	T	Sox2_MA0143.3	3	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr8	27232232	27232233	chr8:27232233:T:C	rs9314344	T	C	T	Sox2_MA0143.3	6	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr8	27245506	27245507	chr8:27245507:A:G	rs17366947	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr8	27262423	27262424	chr8:27262424:C:T	rs73239491	C	T	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr8	27300019	27300020	chr8:27300020:G:A	rs111697342	G	A	g	Sox2_MA0143.3	-14	0	-	0	0	.
chr8	27329405	27329406	chr8:27329406:A:G	rs2322606	A	G	g	Sox2_MA0143.3	24	0	-	0	0	.
chr8	27386782	27386783	chr8:27386783:A:G	rs11776858	A	G	G	Sox2_MA0143.3	4	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr8	27407853	27407854	chr8:27407854:T:C	rs725788	T	C	T	Sox2_MA0143.3	-8	0	+	0	0	.
chr8	27429809	27429810	chr8:27429810:C:T	rs28439949	C	T	C	Sox2_MA0143.3	16	0	+	0	0	.
chr8	27480829	27480830	chr8:27480830:C:A	rs28609846	C	A	C	Sox2_MA0143.3	20	0	+	0	0	.
chr8	27480841	27480842	chr8:27480842:G:A	rs28368998	G	A	G	Sox2_MA0143.3	-3	0	-	0	0	.
chr8	27548291	27548292	chr8:27548292:T:C	rs2640726	T	C	C	Sox2_MA0143.3	22	0	-	0	0	.
chr8	27560522	27560523	chr8:27560523:A:C	rs2741351	A	C	C	Sox2_MA0143.3	2	1	+	8.676919043985553	2.5582713367092715	CCATTGTG
chr8	27571674	27571675	chr8:27571675:G:A	rs78277894	G	A	G	Sox2_MA0143.3	9	0	+	0	0	.
chr8	27573013	27573014	chr8:27573014:G:A	rs7813080	G	A	G	Sox2_MA0143.3	24	0	-	0	0	.
chr8	27573054	27573055	chr8:27573055:C:A	rs7814146	C	A	A	Sox2_MA0143.3	-17	0	-	0	0	.
chr8	27611477	27611478	chr8:27611478:T:C	rs9331887	T	C	T	Sox2_MA0143.3	21	0	-	0	0	.
chr8	27611902	27611903	chr8:27611903:G:T	rs1008456416	G	T	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr8	27647396	27647397	chr8:27647397:G:A	rs525765	G	A	g	Sox2_MA0143.3	14	0	+	0	0	.
chr8	27647919	27647920	chr8:27647920:C:G	rs530223133	C	G	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr8	27661728	27661729	chr8:27661729:G:A	rs485810	G	A	.	Sox2_MA0143.3	15	0	+	0	0	.
chr8	27772138	27772139	chr8:27772139:G:A	rs182355686	G	A	G	Sox2_MA0143.3	17	0	-	0	0	.
chr8	27794840	27794841	chr8:27794841:G:T	rs35102495	G	T	G	Sox2_MA0143.3	-3	0	+	0	0	.
chr8	27827821	27827822	chr8:27827822:A:G	rs111966103	A	G	A	Sox2_MA0143.3	-2	0	-	0	0	.
chr8	27910912	27910913	chr8:27910913:G:C	rs2685351	G	C	C	Sox2_MA0143.3	0	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr8	27911049	27911050	chr8:27911050:T:G	rs2726995	T	G	T	Sox2_MA0143.3	-10	0	+	0	0	.
chr8	27943787	27943788	chr8:27943788:G:A	rs2726953	G	A	G	Sox2_MA0143.3	19	0	+	0	0	.
chr8	27952170	27952171	chr8:27952171:C:T	rs117698435	C	T	C	Sox2_MA0143.3	12	0	-	0	0	.
chr8	27954589	27954590	chr8:27954590:T:C	rs884829	T	C	C	Sox2_MA0143.3	27	0	+	0	0	.
chr8	27955107	27955108	chr8:27955108:C:T	rs882832	C	T	C	Sox2_MA0143.3	12	0	+	0	0	.
chr8	27974648	27974649	chr8:27974649:A:G	rs2727006	A	G	G	Sox2_MA0143.3	4	1	-	8.676919043985553	1.7681642646703322	CCATTGTG
chr8	28006643	28006644	chr8:28006644:C:T	rs79202194	C	T	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr8	28022637	28022638	chr8:28022638:G:A	rs10046724	G	A	A	Sox2_MA0143.3	22	0	-	0	0	.
chr8	28073543	28073544	chr8:28073544:G:A	rs78685578	G	A	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr8	28348535	28348536	chr8:28348536:T:A	rs182034550	T	A	T	Sox2_MA0143.3	25	0	-	0	0	.
chr8	28498189	28498190	chr8:28498190:G:A	rs11775139	G	A	G	Sox2_MA0143.3	1	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr8	28705399	28705400	chr8:28705400:G:A	chr8:28705400:G:A	G	A	G	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr8	29073173	29073174	chr8:29073174:A:T	rs115739660	A	T	A	Sox2_MA0143.3	6	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr8	29169279	29169280	chr8:29169280:G:A	rs28581352	G	A	g	Sox2_MA0143.3	0	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr8	29314464	29314465	chr8:29314465:G:A	rs76856812	G	A	G	Sox2_MA0143.3	-3	0	-	0	0	.
chr8	29348335	29348336	chr8:29348336:G:A	rs2280102	G	A	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr8	29352924	29352925	chr8:29352925:T:G	chr8:29352925:T:G	T	G	T	Sox2_MA0143.3	-3	0	-	0	0	.
chr8	29353714	29353715	chr8:29353715:C:G	rs543399225	C	G	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr8	29383556	29383557	chr8:29383557:G:A	rs115376881	G	A	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr8	29403837	29403838	chr8:29403838:C:T	rs6991796	C	T	C	Sox2_MA0143.3	18	0	+	0	0	.
chr8	29496401	29496402	chr8:29496402:T:C	rs4236681	T	C	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr8	29499135	29499136	chr8:29499136:C:T	rs7001905	C	T	C	Sox2_MA0143.3	5	1	-	9.613475778572903	2.7047209992576837	CCATTGTT
chr8	29513337	29513338	chr8:29513338:A:G	rs11991416	A	G	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr8	29532097	29532098	chr8:29532098:C:A	rs13250654	C	A	C	Sox2_MA0143.3	16	0	+	0	0	.
chr8	29559045	29559046	chr8:29559046:A:G	rs185982673	A	G	A	Sox2_MA0143.3	3	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr8	29576887	29576888	chr8:29576888:G:A	rs117044702	G	A	G	Sox2_MA0143.3	27	0	+	0	0	.
chr8	29595300	29595301	chr8:29595301:G:T	rs76568467	G	T	G	Sox2_MA0143.3	-12	0	+	0	0	.
chr8	29606897	29606898	chr8:29606898:G:A	rs59323199	G	A	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr8	29606920	29606921	chr8:29606921:T:C	rs7821268	T	C	T	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr8	29637547	29637548	chr8:29637548:A:T	rs1345745205	A	T	A	Sox2_MA0143.3	-1	0	-	0	0	.
chr8	29637559	29637560	chr8:29637560:G:C	rs114052457	G	C	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr8	29653501	29653502	chr8:29653502:C:G	rs76550780	C	G	C	Sox2_MA0143.3	5	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr8	29659400	29659401	chr8:29659401:C:G	rs185394588	C	G	C	Sox2_MA0143.3	-12	0	-	0	0	.
chr8	29665606	29665607	chr8:29665607:C:T	rs6558136	C	T	T	Sox2_MA0143.3	20	0	+	0	0	.
chr8	29681056	29681057	chr8:29681057:G:C	rs28703948	G	C	C	Sox2_MA0143.3	17	0	-	0	0	.
chr8	29718457	29718458	chr8:29718458:G:A	rs7008633	G	A	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr8	29723116	29723117	chr8:29723117:A:T	rs55698894	A	T	A	Sox2_MA0143.3	2	1	+	9.613475778572903	9.800647049772198	CCATTGTT
chr8	29772664	29772665	chr8:29772665:G:C	rs62499372	G	C	G	Sox2_MA0143.3	24	0	-	0	0	.
chr8	29783945	29783946	chr8:29783946:A:C	rs28490372	A	C	A	Sox2_MA0143.3	-12	0	-	0	0	.
chr8	29807526	29807527	chr8:29807527:G:C	rs1232632720	G	C	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr8	29836482	29836483	chr8:29836483:G:T	rs11781857	G	T	G	Sox2_MA0143.3	-11	0	+	0	0	.
chr8	29850086	29850087	chr8:29850087:G:A	rs77393807	G	A	G	Sox2_MA0143.3	23	0	+	0	0	.
chr8	29920530	29920531	chr8:29920531:C:T	rs16876175	C	T	C	Sox2_MA0143.3	19	0	-	0	0	.
chr8	29932524	29932525	chr8:29932525:T:C	rs56732568	T	C	T	Sox2_MA0143.3	3	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr8	29956776	29956777	chr8:29956777:A:G	rs73563266	A	G	G	Sox2_MA0143.3	3	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr8	29976467	29976468	chr8:29976468:C:G	rs7815147	C	G	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr8	30098469	30098470	chr8:30098470:A:G	rs75791277	A	G	A	Sox2_MA0143.3	-20	0	+	0	0	.
chr8	30100299	30100300	chr8:30100300:G:A	rs12386822	G	A	G	Sox2_MA0143.3	11	0	+	0	0	.
chr8	30117801	30117802	chr8:30117802:A:G	rs16876504	A	G	A	Sox2_MA0143.3	26	0	+	0	0	.
chr8	30261783	30261784	chr8:30261784:C:T	rs6468239	C	T	T	Sox2_MA0143.3	21	0	-	0	0	.
chr8	30264696	30264697	chr8:30264697:A:G	rs186478458	A	G	A	Sox2_MA0143.3	13	0	+	0	0	.
chr8	30275074	30275075	chr8:30275075:C:T	rs569639909	C	T	C	Sox2_MA0143.3	-12	0	-	0	0	.
chr8	30279803	30279804	chr8:30279804:A:G	rs144110485	A	G	A	Sox2_MA0143.3	6	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr8	30279814	30279815	chr8:30279815:T:C	rs79823537	T	C	C	Sox2_MA0143.3	-5	0	-	0	0	.
chr8	30281218	30281219	chr8:30281219:G:A	rs4733469	G	A	G	Sox2_MA0143.3	25	0	-	0	0	.
chr8	30281341	30281342	chr8:30281342:A:C	rs75059009	A	C	A	Sox2_MA0143.3	-13	0	+	0	0	.
chr8	30283080	30283081	chr8:30283081:G:T	rs141882085	G	T	T	Sox2_MA0143.3	8	0	+	0	0	.
chr8	30380365	30380366	chr8:30380366:G:A	rs10087801	G	A	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr8	30415955	30415956	chr8:30415956:C:G	chr8:30415956:C:G	C	G	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr8	30501229	30501230	chr8:30501230:C:T	rs183878024	C	T	C	Sox2_MA0143.3	10	0	+	0	0	.
chr8	30549447	30549448	chr8:30549448:A:G	rs974337804	A	G	A	Sox2_MA0143.3	15	0	+	0	0	.
chr8	30586717	30586718	chr8:30586718:G:A	rs2978286	G	A	G	Sox2_MA0143.3	17	0	-	0	0	.
chr8	30803260	30803261	chr8:30803261:G:A	rs183844840	G	A	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr8	30890462	30890463	chr8:30890463:T:C	rs75386571	T	C	T	Sox2_MA0143.3	3	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr8	31035432	31035433	chr8:31035433:C:G	rs532667014	C	G	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr8	31318691	31318692	chr8:31318692:T:A	rs2575035	T	A	A	Sox2_MA0143.3	24	0	+	0	0	.
chr8	31874847	31874848	chr8:31874848:G:A	rs71523446	G	A	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr8	31946017	31946018	chr8:31946018:G:A	rs7002063	G	A	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr8	32112355	32112356	chr8:32112356:G:A	rs72612103	G	A	G	Sox2_MA0143.3	16	0	-	0	0	.
chr8	32113139	32113140	chr8:32113140:G:C	rs10808322	G	C	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr8	32246541	32246542	chr8:32246542:A:G	rs1351510	A	G	G	Sox2_MA0143.3	8	0	+	0	0	.
chr8	32260098	32260099	chr8:32260099:C:T	rs189622166	C	T	C	Sox2_MA0143.3	16	0	+	0	0	.
chr8	32271535	32271536	chr8:32271536:T:C	rs115694487	T	C	T	Sox2_MA0143.3	-16	0	+	0	0	.
chr8	32491737	32491738	chr8:32491738:T:C	rs4733122	T	C	T	Sox2_MA0143.3	10	0	-	0	0	.
chr8	32510690	32510691	chr8:32510691:G:T	rs75673683	G	T	G	Sox2_MA0143.3	0	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr8	32582710	32582711	chr8:32582711:C:T	rs2439295	C	T	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr8	32582716	32582717	chr8:32582717:T:C	rs77571549	T	C	T	Sox2_MA0143.3	4	1	+	8.864090315184848	1.9553355358696274	CCTTTGTG
chr8	32683540	32683541	chr8:32683541:A:T	rs10503925	A	T	A	Sox2_MA0143.3	-1	0	-	0	0	.
chr8	32750762	32750763	chr8:32750763:C:T	rs75220960	C	T	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr8	32837539	32837540	chr8:32837540:G:A	rs117506888	G	A	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr8	32918616	32918617	chr8:32918617:T:G	rs151144861	T	G	T	Sox2_MA0143.3	20	0	-	0	0	.
chr8	32928064	32928065	chr8:32928065:G:A	rs1017175731	G	A	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr8	33173389	33173390	chr8:33173390:G:A	rs16880471	G	A	T	Sox2_MA0143.3	24	0	+	0	0	.
chr8	33255797	33255798	chr8:33255798:G:A	rs4733419	G	A	G	Sox2_MA0143.3	25	0	-	0	0	.
chr8	33255821	33255822	chr8:33255822:G:C	rs78403521	G	C	G	Sox2_MA0143.3	1	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr8	33314018	33314019	chr8:33314019:T:C	rs1182505910	T	C	T	Sox2_MA0143.3	3	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr8	33328758	33328759	chr8:33328759:T:C	rs7834170	T	C	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr8	33564988	33564989	chr8:33564989:C:T	rs16881103	C	T	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr8	33564997	33564998	chr8:33564998:A:G	rs147231629	A	G	A	Sox2_MA0143.3	2	1	+	9.019595766176417	2.900948058900136	CCATTGTC
chr8	33566427	33566428	chr8:33566428:G:A	rs537857827	G	A	G	Sox2_MA0143.3	11	0	-	0	0	.
chr8	33566451	33566452	chr8:33566452:C:T	rs1163765885	C	T	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr8	33591119	33591120	chr8:33591120:T:C	rs1447775840	T	C	T	Sox2_MA0143.3	3	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr8	33721809	33721810	chr8:33721810:T:C	rs112360097	T	C	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr8	33804882	33804883	chr8:33804883:G:A	rs72630922	G	A	A	Sox2_MA0143.3	22	0	+	0	0	.
chr8	33804885	33804886	chr8:33804886:C:A	rs72630923	C	A	A	Sox2_MA0143.3	25	0	+	0	0	.
chr8	33947797	33947798	chr8:33947798:T:A	rs190476022	T	A	T	Sox2_MA0143.3	-20	0	+	0	0	.
chr8	34424268	34424269	chr8:34424269:A:G	rs2609618	A	G	G	Sox2_MA0143.3	14	0	+	0	0	.
chr8	34665027	34665028	chr8:34665028:A:T	rs12546023	A	T	A	Sox2_MA0143.3	-6	0	+	0	0	.
chr8	34762025	34762026	chr8:34762026:T:C	rs2037529	T	C	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr8	35011682	35011683	chr8:35011683:G:T	rs6468300	G	T	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr8	35014192	35014193	chr8:35014193:C:T	rs112859559	C	T	C	Sox2_MA0143.3	19	0	-	0	0	.
chr8	35370754	35370755	chr8:35370755:T:C	rs4739402	T	C	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr8	35726296	35726297	chr8:35726297:G:C	rs6996645	G	C	C	Sox2_MA0143.3	20	0	+	0	0	.
chr8	35752640	35752641	chr8:35752641:C:T	rs116534845	C	T	C	Sox2_MA0143.3	27	0	+	0	0	.
chr8	35863640	35863641	chr8:35863641:G:A	rs9642758	G	A	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr8	36256720	36256721	chr8:36256721:C:A	rs1413875	C	A	A	Sox2_MA0143.3	17	0	-	0	0	.
chr8	36885271	36885272	chr8:36885272:T:A	rs4263761	T	A	A	Sox2_MA0143.3	21	0	+	0	0	.
chr8	36897886	36897887	chr8:36897887:T:C	rs970968	T	C	C	Sox2_MA0143.3	19	0	+	0	0	.
chr8	37014490	37014491	chr8:37014491:T:G	rs6468390	T	G	G	Sox2_MA0143.3	9	0	+	0	0	.
chr8	37034506	37034507	chr8:37034507:C:T	rs3015745	C	T	T	Sox2_MA0143.3	26	0	+	0	0	.
chr8	37035601	37035602	chr8:37035602:C:T	rs3015743	C	T	T	Sox2_MA0143.3	18	0	+	0	0	.
chr8	37149212	37149213	chr8:37149213:A:G	rs16886043	A	G	A	Sox2_MA0143.3	19	0	-	0	0	.
chr8	37174539	37174540	chr8:37174540:C:T	rs59607280	C	T	T	Sox2_MA0143.3	24	0	-	0	0	.
chr8	37258081	37258082	chr8:37258082:A:G	rs9772708	A	G	C	Sox2_MA0143.3	26	0	-	0	0	.
chr8	37491086	37491087	chr8:37491087:G:A	rs73675815	G	A	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr8	37561912	37561913	chr8:37561913:A:G	rs11990193	A	G	G	Sox2_MA0143.3	-5	0	+	0	0	.
chr8	37610499	37610500	chr8:37610500:G:T	rs762127	G	T	T	Sox2_MA0143.3	1	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr8	37615392	37615393	chr8:37615393:A:G	rs713189	A	G	G	Sox2_MA0143.3	17	0	-	0	0	.
chr8	37621662	37621663	chr8:37621663:C:A	rs12542301	C	A	C	Sox2_MA0143.3	0	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr8	37624544	37624545	chr8:37624545:T:C	rs7388304	T	C	C	Sox2_MA0143.3	22	0	-	0	0	.
chr8	37928234	37928235	chr8:37928235:T:G	rs74417635	T	G	t	Sox2_MA0143.3	2	1	-	9.019595766176417	2.900948058900136	CCATTGTC
chr8	38268811	38268812	chr8:38268812:G:C	rs10102847	G	C	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr8	38296052	38296053	chr8:38296053:A:T	rs55703821	A	T	A	Sox2_MA0143.3	20	0	-	0	0	.
chr8	38296065	38296066	chr8:38296066:A:C	rs573949356	A	C	A	Sox2_MA0143.3	7	1	-	9.800647049772198	8.864090315184848	CCTTTGTT
chr8	38385228	38385229	chr8:38385229:A:G	chr8:38385229:A:G	A	G	A	Sox2_MA0143.3	13	0	+	0	0	.
chr8	38404714	38404715	chr8:38404715:T:C	rs7001340	T	C	C	Sox2_MA0143.3	-20	0	-	0	0	.
chr8	38430036	38430037	chr8:38430037:C:T	rs4647907	C	T	T	Sox2_MA0143.3	-7	0	-	0	0	.
chr8	38430049	38430050	chr8:38430050:G:A	rs117596666	G	A	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr8	38430687	38430688	chr8:38430688:G:A	rs17182254	G	A	G	Sox2_MA0143.3	10	0	-	0	0	.
chr8	38468177	38468178	chr8:38468178:G:A	rs4647909	G	A	G	Sox2_MA0143.3	0	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr8	38524365	38524366	chr8:38524366:T:C	rs12682402	T	C	C	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr8	38530911	38530912	chr8:38530912:G:T	rs1114850	G	T	G	Sox2_MA0143.3	-3	0	+	0	0	.
chr8	38613981	38613982	chr8:38613982:C:G	rs17583015	C	G	C	Sox2_MA0143.3	1	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr8	38670989	38670990	chr8:38670990:T:C	rs2044528	T	C	T	Sox2_MA0143.3	-4	0	-	0	0	.
chr8	38701479	38701480	chr8:38701480:C:T	rs16887704	C	T	C	Sox2_MA0143.3	18	0	+	0	0	.
chr8	38710331	38710332	chr8:38710332:T:C	rs6474492	T	C	C	Sox2_MA0143.3	6	1	+	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr8	38714694	38714695	chr8:38714695:G:T	rs71517726	G	T	G	Sox2_MA0143.3	23	0	+	0	0	.
chr8	38714696	38714697	chr8:38714697:A:G	rs568309069	A	G	A	Sox2_MA0143.3	25	0	+	0	0	.
chr8	38717964	38717965	chr8:38717965:C:T	rs57103009	C	T	C	Sox2_MA0143.3	0	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr8	38729930	38729931	chr8:38729931:G:T	rs561547491	G	T	G	Sox2_MA0143.3	-12	0	+	0	0	.
chr8	38734616	38734617	chr8:38734617:A:G	rs7821911	A	G	A	Sox2_MA0143.3	11	0	-	0	0	.
chr8	38776195	38776196	chr8:38776196:A:G	rs17585539	A	G	A	Sox2_MA0143.3	18	0	+	0	0	.
chr8	38826908	38826909	chr8:38826909:G:T	rs2037205	G	T	T	Sox2_MA0143.3	18	0	+	0	0	.
chr8	38851449	38851450	chr8:38851450:G:A	rs114083053	G	A	G	Sox2_MA0143.3	0	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr8	38867675	38867676	chr8:38867676:A:C	rs35273942	A	C	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr8	38876609	38876610	chr8:38876610:T:G	rs16887854	T	G	T	Sox2_MA0143.3	18	0	-	0	0	.
chr8	38913889	38913890	chr8:38913890:A:G	rs10109778	A	G	G	Sox2_MA0143.3	2	1	+	8.676919043985553	2.5582713367092715	CCATTGTG
chr8	38973614	38973615	chr8:38973615:T:C	rs11553514	T	C	T	Sox2_MA0143.3	20	0	+	0	0	.
chr8	39227784	39227785	chr8:39227785:T:C	chr8:39227785:T:C	T	C	T	Sox2_MA0143.3	-19	0	-	0	0	.
chr8	39233371	39233372	chr8:39233372:T:C	rs115676836	T	C	C	Sox2_MA0143.3	27	0	+	0	0	.
chr8	39896930	39896931	chr8:39896931:T:C	rs10958571	T	C	C	Sox2_MA0143.3	6	1	+	8.676919043985553	1.7681642646703326	CCATTGTG
chr8	39905861	39905862	chr8:39905862:A:G	rs6474190	A	G	G	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr8	39962689	39962690	chr8:39962690:C:T	rs2543049	C	T	T	Sox2_MA0143.3	-3	0	-	0	0	.
chr8	39990499	39990500	chr8:39990500:A:G	rs72630546	A	G	A	Sox2_MA0143.3	4	1	-	8.864090315184848	1.9553355358696274	CCTTTGTG
chr8	40015784	40015785	chr8:40015785:G:A	rs2955903	G	A	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr8	40054924	40054925	chr8:40054925:T:C	rs567830390	T	C	T	Sox2_MA0143.3	-9	0	-	0	0	.
chr8	40099598	40099599	chr8:40099599:A:G	rs72633021	A	G	A	Sox2_MA0143.3	3	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr8	40174661	40174662	chr8:40174662:A:T	rs13270220	A	T	A	Sox2_MA0143.3	-14	0	+	0	0	.
chr8	40204973	40204974	chr8:40204974:G:A	rs6474237	G	A	G	Sox2_MA0143.3	25	0	-	0	0	.
chr8	40228202	40228203	chr8:40228203:G:T	rs1378420	G	T	T	Sox2_MA0143.3	18	0	-	0	0	.
chr8	40231965	40231966	chr8:40231966:T:C	rs191360022	T	C	T	Sox2_MA0143.3	19	0	+	0	0	.
chr8	40323663	40323664	chr8:40323664:A:G	rs210662	A	G	G	Sox2_MA0143.3	13	0	+	0	0	.
chr8	40350019	40350020	chr8:40350020:G:A	rs77043538	G	A	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr8	40350620	40350621	chr8:40350621:C:T	rs11776037	C	T	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr8	40418418	40418419	chr8:40418419:T:C	rs956686	T	C	T	Sox2_MA0143.3	27	0	-	0	0	.
chr8	40482700	40482701	chr8:40482701:A:G	rs1429945	A	G	G	Sox2_MA0143.3	9	0	-	0	0	.
chr8	40518909	40518910	chr8:40518910:G:A	rs2565096	G	A	A	Sox2_MA0143.3	-3	0	-	0	0	.
chr8	40519084	40519085	chr8:40519085:T:C	rs2589868	T	C	C	Sox2_MA0143.3	6	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr8	40519316	40519317	chr8:40519317:T:C	rs10098427	T	C	T	Sox2_MA0143.3	3	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr8	40519317	40519318	chr8:40519318:T:C	rs77393739	T	C	T	Sox2_MA0143.3	4	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr8	40548886	40548887	chr8:40548887:G:T	rs11996359	G	T	G	Sox2_MA0143.3	7	1	-	9.206767037375712	3.5547341015215945	CCTTTGTC
chr8	40597480	40597481	chr8:40597481:C:T	rs6989637	C	T	c	Sox2_MA0143.3	-19	0	+	0	0	.
chr8	40608163	40608164	chr8:40608164:C:T	rs2880470	C	T	C	Sox2_MA0143.3	13	0	+	0	0	.
chr8	40886232	40886233	chr8:40886233:C:T	rs4736886	C	T	C	Sox2_MA0143.3	14	0	-	0	0	.
chr8	40974386	40974387	chr8:40974387:A:G	rs138985805	A	G	A	Sox2_MA0143.3	-8	0	-	0	0	.
chr8	40977351	40977352	chr8:40977352:A:G	rs7844615	A	G	G	Sox2_MA0143.3	26	0	-	0	0	.
chr8	40977360	40977361	chr8:40977361:C:T	rs11987006	C	T	C	Sox2_MA0143.3	17	0	-	0	0	.
chr8	40992980	40992981	chr8:40992981:T:C	rs78043636	T	C	T	Sox2_MA0143.3	8	0	-	0	0	.
chr8	40992986	40992987	chr8:40992987:T:C	rs111904220	T	C	T	Sox2_MA0143.3	2	1	-	9.019595766176417	2.900948058900136	CCATTGTC
chr8	40993983	40993984	chr8:40993984:G:A	rs75010308	G	A	G	Sox2_MA0143.3	8	0	-	0	0	.
chr8	41076466	41076467	chr8:41076467:G:A	rs13257857	G	A	G	Sox2_MA0143.3	17	0	+	0	0	.
chr8	41113503	41113504	chr8:41113504:C:T	rs62642262	C	T	C	Sox2_MA0143.3	5	1	-	9.019595766176417	2.110840986861197	CCATTGTC
chr8	41177127	41177128	chr8:41177128:T:G	rs62642283	T	G	T	Sox2_MA0143.3	7	1	+	9.613475778572903	8.676919043985553	CCATTGTT
chr8	41189761	41189762	chr8:41189762:G:A	rs4736940	G	A	G	Sox2_MA0143.3	-2	0	+	0	0	.
chr8	41315150	41315151	chr8:41315151:G:C	rs73676355	G	C	C	Sox2_MA0143.3	20	0	-	0	0	.
chr8	41449181	41449182	chr8:41449182:G:A	rs13264955	G	A	G	Sox2_MA0143.3	12	0	+	0	0	.
chr8	41463556	41463557	chr8:41463557:C:T	rs2042667	C	T	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr8	41477615	41477616	chr8:41477616:G:C	rs10958686	G	C	G	Sox2_MA0143.3	14	0	-	0	0	.
chr8	41505357	41505358	chr8:41505358:A:G	rs77984864	A	G	A	Sox2_MA0143.3	13	0	-	0	0	.
chr8	41544051	41544052	chr8:41544052:T:A	rs11992589	T	A	T	Sox2_MA0143.3	-19	0	-	0	0	.
chr8	41578182	41578183	chr8:41578183:C:T	rs1172844494	C	T	C	Sox2_MA0143.3	-5	0	-	0	0	.
chr8	41578195	41578196	chr8:41578196:T:G	rs941858709	T	G	T	Sox2_MA0143.3	-18	0	-	0	0	.
chr8	41820871	41820872	chr8:41820872:C:A	rs112295391	C	A	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr8	41835805	41835806	chr8:41835806:T:C	rs28743134	T	C	T	Sox2_MA0143.3	9	0	-	0	0	.
chr8	41838494	41838495	chr8:41838495:G:C	rs117497484	G	C	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr8	41929637	41929638	chr8:41929638:A:T	rs11551808	A	T	A	Sox2_MA0143.3	-6	0	-	0	0	.
chr8	42152746	42152747	chr8:42152747:G:A	rs543745171	G	A	G	Sox2_MA0143.3	-12	0	+	0	0	.
chr8	42174507	42174508	chr8:42174508:A:G	rs4581040	A	G	A	Sox2_MA0143.3	-3	0	-	0	0	.
chr8	42196603	42196604	chr8:42196604:C:A	rs139990438	C	A	C	Sox2_MA0143.3	22	0	-	0	0	.
chr8	42199025	42199026	chr8:42199026:G:C	rs8178703	G	C	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr8	42215627	42215628	chr8:42215628:G:C	chr8:42215628:G:C	G	C	G	Sox2_MA0143.3	0	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr8	42266077	42266078	chr8:42266078:C:T	rs78874948	C	T	C	Sox2_MA0143.3	-20	0	-	0	0	.
chr8	42297347	42297348	chr8:42297348:A:G	rs78342373	A	G	A	Sox2_MA0143.3	-4	0	+	0	0	.
chr8	42427316	42427317	chr8:42427317:C:T	rs188056792	C	T	C	Sox2_MA0143.3	5	1	-	8.676919043985553	1.7681642646703324	CCATTGTG
chr8	42496362	42496363	chr8:42496363:A:T	rs146110342	A	T	A	Sox2_MA0143.3	9	0	-	0	0	.
chr8	42496378	42496379	chr8:42496379:T:C	rs553459349	T	C	T	Sox2_MA0143.3	-7	0	-	0	0	.
chr8	42554452	42554453	chr8:42554453:G:A	rs75611625	G	A	g	Sox2_MA0143.3	-20	0	+	0	0	.
chr8	42554483	42554484	chr8:42554484:A:C	rs78607781	A	C	A	Sox2_MA0143.3	11	0	+	0	0	.
chr8	42690152	42690153	chr8:42690153:T:C	rs9692914	T	C	c	Sox2_MA0143.3	-8	0	+	0	0	.
chr8	42894242	42894243	chr8:42894243:A:T	rs189762020	A	T	A	Sox2_MA0143.3	-18	0	+	0	0	.
chr8	42897505	42897506	chr8:42897506:C:G	chr8:42897506:C:G	C	G	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr8	42897744	42897745	chr8:42897745:G:T	rs758907235	G	T	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr8	42979455	42979456	chr8:42979456:T:C	rs11997992	T	C	C	Sox2_MA0143.3	7	1	+	9.800647049772198	9.206767037375712	CCTTTGTT
chr8	43199281	43199282	chr8:43199282:T:G	rs117086996	T	G	T	Sox2_MA0143.3	-4	0	-	0	0	.
chr8	43556611	43556612	chr8:43556612:C:T	rs180691383	C	T	T	Sox2_MA0143.3	24	0	-	0	0	.
chr8	44205436	44205437	chr8:44205437:A:G	rs1355907420	A	G	.	Sox2_MA0143.3	15	0	+	0	0	.
chr8	44460844	44460845	chr8:44460845:T:C	rs1187962367	T	C	.	Sox2_MA0143.3	4	1	+	9.800647049772198	2.8918922704569785	CCTTTGTT
chr8	45928376	45928377	chr8:45928377:T:C	rs4338115	T	C	.	Sox2_MA0143.3	23	0	+	0	0	.
chr8	46027978	46027979	chr8:46027979:T:C	rs7838878	T	C	.	Sox2_MA0143.3	-7	0	-	0	0	.
chr8	46030709	46030710	chr8:46030710:C:T	rs143594613	C	T	.	Sox2_MA0143.3	-8	0	-	0	0	.
chr8	46098352	46098353	chr8:46098353:T:G	rs113026561	T	G	.	Sox2_MA0143.3	-10	0	+	0	0	.
chr8	46103915	46103916	chr8:46103916:C:T	rs10094822	C	T	.	Sox2_MA0143.3	14	0	-	0	0	.
chr8	46119805	46119806	chr8:46119806:G:C	rs10105092	G	C	.	Sox2_MA0143.3	-16	0	+	0	0	.
chr8	46125814	46125815	chr8:46125815:T:C	chr8:46125815:T:C	T	C	.	Sox2_MA0143.3	4	1	+	8.864090315184848	1.9553355358696274	CCTTTGTG
chr8	46125818	46125819	chr8:46125819:G:C	rs75261208	G	C	.	Sox2_MA0143.3	8	0	+	0	0	.
chr8	46134997	46134998	chr8:46134998:T:C	rs13253473	T	C	.	Sox2_MA0143.3	11	0	+	0	0	.
chr8	46135010	46135011	chr8:46135011:C:T	rs117518884	C	T	.	Sox2_MA0143.3	24	0	+	0	0	.
chr8	46136021	46136022	chr8:46136022:T:C	rs72638667	T	C	.	Sox2_MA0143.3	17	0	-	0	0	.
chr8	46152675	46152676	chr8:46152676:G:A	rs186953218	G	A	.	Sox2_MA0143.3	-5	0	+	0	0	.
chr8	46174122	46174123	chr8:46174123:G:A	rs115374279	G	A	.	Sox2_MA0143.3	0	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr8	46260497	46260498	chr8:46260498:T:C	rs4872698	T	C	.	Sox2_MA0143.3	-13	0	-	0	0	.
chr8	46331758	46331759	chr8:46331759:C:T	rs189342316	C	T	.	Sox2_MA0143.3	-10	0	+	0	0	.
chr8	46331785	46331786	chr8:46331786:G:C	rs117698320	G	C	.	Sox2_MA0143.3	17	0	+	0	0	.
chr8	46332456	46332457	chr8:46332457:C:A	rs150957622	C	A	.	Sox2_MA0143.3	0	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr8	46575446	46575447	chr8:46575447:C:A	rs28547430	C	A	-	Sox2_MA0143.3	-17	0	-	0	0	.
chr8	47369475	47369476	chr8:47369476:G:T	rs563535816	G	T	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr8	47476145	47476146	chr8:47476146:G:A	rs183302577	G	A	G	Sox2_MA0143.3	18	0	+	0	0	.
chr8	47498757	47498758	chr8:47498758:G:T	rs11784823	G	T	G	Sox2_MA0143.3	-14	0	+	0	0	.
chr8	47635922	47635923	chr8:47635923:A:G	rs192335334	A	G	A	Sox2_MA0143.3	-14	0	-	0	0	.
chr8	47665269	47665270	chr8:47665270:G:T	rs78503035	G	T	G	Sox2_MA0143.3	-3	0	-	0	0	.
chr8	48136708	48136709	chr8:48136709:C:T	rs78010054	C	T	C	Sox2_MA0143.3	15	0	+	0	0	.
chr8	48146835	48146836	chr8:48146836:G:C	rs6986825	G	C	G	Sox2_MA0143.3	21	0	-	0	0	.
chr8	48153864	48153865	chr8:48153865:G:A	rs10104502	G	A	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr8	48156934	48156935	chr8:48156935:T:C	rs72633944	T	C	T	Sox2_MA0143.3	20	0	-	0	0	.
chr8	48382181	48382182	chr8:48382182:T:C	rs141031796	T	C	T	Sox2_MA0143.3	25	0	+	0	0	.
chr8	48398241	48398242	chr8:48398242:C:T	rs10107550	C	T	C	Sox2_MA0143.3	0	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr8	48422870	48422871	chr8:48422871:G:A	rs11989167	G	A	A	Sox2_MA0143.3	-18	0	+	0	0	.
chr8	48430344	48430345	chr8:48430345:G:T	rs1445735094	G	T	G	Sox2_MA0143.3	5	1	+	9.206767037375712	2.298012258060492	CCTTTGTC
chr8	48493920	48493921	chr8:48493921:T:C	chr8:48493921:T:C	T	C	T	Sox2_MA0143.3	9	0	+	0	0	.
chr8	48520193	48520194	chr8:48520194:C:T	rs78984999	C	T	C	Sox2_MA0143.3	21	0	-	0	0	.
chr8	48642912	48642913	chr8:48642913:G:T	chr8:48642913:G:T	G	T	G	Sox2_MA0143.3	1	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr8	48708379	48708380	chr8:48708380:T:C	rs10111821	T	C	C	Sox2_MA0143.3	21	0	-	0	0	.
chr8	48818280	48818281	chr8:48818281:T:C	rs75437967	T	C	T	Sox2_MA0143.3	-9	0	-	0	0	.
chr8	49018495	49018496	chr8:49018496:T:A	rs974781	T	A	A	Sox2_MA0143.3	2	1	+	9.800647049772198	9.613475778572903	CCTTTGTT
chr8	49217051	49217052	chr8:49217052:T:G	rs36075037	T	G	G	Sox2_MA0143.3	27	0	+	0	0	.
chr8	49307341	49307342	chr8:49307342:C:G	rs72505410	C	G	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr8	49310251	49310252	chr8:49310252:A:T	rs35575648	A	T	A	Sox2_MA0143.3	6	1	-	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr8	49385865	49385866	chr8:49385866:G:A	rs752405354	G	A	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr8	49519245	49519246	chr8:49519246:T:C	rs1674243	T	C	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr8	50127062	50127063	chr8:50127063:C:T	rs7821115	C	T	T	Sox2_MA0143.3	-3	0	-	0	0	.
chr8	50318316	50318317	chr8:50318317:A:C	rs12544473	A	C	C	Sox2_MA0143.3	11	0	+	0	0	.
chr8	50380977	50380978	chr8:50380978:C:T	rs7823310	C	T	T	Sox2_MA0143.3	22	0	+	0	0	.
chr8	50513515	50513516	chr8:50513516:G:A	rs2448931	G	A	G	Sox2_MA0143.3	13	0	-	0	0	.
chr8	51179909	51179910	chr8:51179910:G:A	rs73571917	G	A	G	Sox2_MA0143.3	27	0	+	0	0	.
chr8	51451919	51451920	chr8:51451920:G:C	rs10958266	G	C	C	Sox2_MA0143.3	20	0	-	0	0	.
chr8	51453656	51453657	chr8:51453657:G:A	rs6473600	G	A	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr8	51925288	51925289	chr8:51925289:C:T	rs61196861	C	T	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr8	51925291	51925292	chr8:51925292:G:A	rs12681203	G	A	G	Sox2_MA0143.3	-2	0	+	0	0	.
chr8	52000339	52000340	chr8:52000340:G:C	rs7008584	G	C	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr8	52040722	52040723	chr8:52040723:A:G	rs2252647	A	G	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr8	52096756	52096757	chr8:52096757:G:T	rs75566020	G	T	G	Sox2_MA0143.3	1	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr8	52173460	52173461	chr8:52173461:G:C	rs16917380	G	C	G	Sox2_MA0143.3	-14	0	+	0	0	.
chr8	52339745	52339746	chr8:52339746:G:C	rs1326064248	G	C	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr8	52352254	52352255	chr8:52352255:T:C	rs73582607	T	C	t	Sox2_MA0143.3	-19	0	-	0	0	.
chr8	52533749	52533750	chr8:52533750:G:A	rs187467933	G	A	G	Sox2_MA0143.3	17	0	+	0	0	.
chr8	52776551	52776552	chr8:52776552:G:A	rs17338055	G	A	G	Sox2_MA0143.3	0	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr8	52906213	52906214	chr8:52906214:C:G	rs10113370	C	G	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr8	53017286	53017287	chr8:53017287:C:T	rs360992	C	T	C	Sox2_MA0143.3	19	0	+	0	0	.
chr8	53104557	53104558	chr8:53104558:A:T	rs12678085	A	T	T	Sox2_MA0143.3	-15	0	-	0	0	.
chr8	53116475	53116476	chr8:53116476:G:A	rs4873729	G	A	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr8	53252514	53252515	chr8:53252515:A:G	rs79843602	A	G	A	Sox2_MA0143.3	-13	0	-	0	0	.
chr8	53258821	53258822	chr8:53258822:T:C	rs62505387	T	C	T	Sox2_MA0143.3	-20	0	+	0	0	.
chr8	53337797	53337798	chr8:53337798:C:G	rs75703966	C	G	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr8	53363709	53363710	chr8:53363710:G:A	rs62505426	G	A	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr8	53363710	53363711	chr8:53363711:T:C	rs6998372	T	C	T	Sox2_MA0143.3	-5	0	+	0	0	.
chr8	53452703	53452704	chr8:53452704:C:G	rs62507462	C	G	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr8	53559618	53559619	chr8:53559619:G:A	rs13263182	G	A	G	Sox2_MA0143.3	14	0	-	0	0	.
chr8	53564407	53564408	chr8:53564408:A:C	rs7461954	A	C	C	Sox2_MA0143.3	6	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr8	53657898	53657899	chr8:53657899:C:G	rs532358125	C	G	C	Sox2_MA0143.3	1	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr8	53905187	53905188	chr8:53905188:T:C	rs1483537	T	C	T	Sox2_MA0143.3	21	0	-	0	0	.
chr8	53905201	53905202	chr8:53905202:A:G	rs192569737	A	G	A	Sox2_MA0143.3	7	1	-	9.613475778572903	9.019595766176417	CCATTGTT
chr8	54148574	54148575	chr8:54148575:G:C	rs11996128	G	C	g	Sox2_MA0143.3	-2	0	-	0	0	.
chr8	54179347	54179348	chr8:54179348:C:A	rs413667	C	A	A	Sox2_MA0143.3	0	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr8	54335827	54335828	chr8:54335828:C:T	rs1394469	C	T	T	Sox2_MA0143.3	-3	0	-	0	0	.
chr8	54394883	54394884	chr8:54394884:G:A	rs55702528	G	A	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr8	54394913	54394914	chr8:54394914:A:G	rs117682997	A	G	A	Sox2_MA0143.3	13	0	+	0	0	.
chr8	54617051	54617052	chr8:54617052:A:G	rs145290	A	G	A	Sox2_MA0143.3	22	0	+	0	0	.
chr8	54863265	54863266	chr8:54863266:G:A	rs6983776	G	A	A	Sox2_MA0143.3	13	0	+	0	0	.
chr8	54938083	54938084	chr8:54938084:C:T	rs79579684	C	T	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr8	54944538	54944539	chr8:54944539:G:T	rs11781549	G	T	G	Sox2_MA0143.3	13	0	-	0	0	.
chr8	55111208	55111209	chr8:55111209:G:A	rs2061998	G	A	G	Sox2_MA0143.3	26	0	+	0	0	.
chr8	55272757	55272758	chr8:55272758:A:T	rs10504189	A	T	A	Sox2_MA0143.3	-17	0	+	0	0	.
chr8	55280218	55280219	chr8:55280219:T:C	rs6996766	T	C	T	Sox2_MA0143.3	-20	0	+	0	0	.
chr8	55401262	55401263	chr8:55401263:C:T	rs143892543	C	T	C	Sox2_MA0143.3	1	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr8	55415935	55415936	chr8:55415936:G:A	rs7011439	G	A	A	Sox2_MA0143.3	16	0	-	0	0	.
chr8	55451115	55451116	chr8:55451116:A:G	rs115605991	A	G	A	Sox2_MA0143.3	15	0	+	0	0	.
chr8	55528732	55528733	chr8:55528733:C:A	rs142169962	C	A	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr8	55690278	55690279	chr8:55690279:A:G	rs7011147	A	G	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr8	55758377	55758378	chr8:55758378:T:C	rs10808900	T	C	T	Sox2_MA0143.3	17	0	-	0	0	.
chr8	55768359	55768360	chr8:55768360:G:A	rs59886433	G	A	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr8	55884858	55884859	chr8:55884859:C:T	rs7816785	C	T	T	Sox2_MA0143.3	16	0	+	0	0	.
chr8	55939345	55939346	chr8:55939346:T:C	rs79264935	T	C	T	Sox2_MA0143.3	2	1	-	9.019595766176417	2.900948058900136	CCATTGTC
chr8	55991446	55991447	chr8:55991447:G:A	rs6990948	G	A	A	Sox2_MA0143.3	9	0	-	0	0	.
chr8	55991466	55991467	chr8:55991467:T:A	rs16920192	T	A	T	Sox2_MA0143.3	-11	0	-	0	0	.
chr8	56071604	56071605	chr8:56071605:A:C	rs16920295	A	C	A	Sox2_MA0143.3	4	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr8	56100600	56100601	chr8:56100601:A:T	rs112649404	A	T	A	Sox2_MA0143.3	-12	0	-	0	0	.
chr8	56245925	56245926	chr8:56245926:C:T	rs117962299	C	T	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr8	56299816	56299817	chr8:56299817:A:C	chr8:56299817:A:C	A	C	A	Sox2_MA0143.3	23	0	+	0	0	.
chr8	56373611	56373612	chr8:56373612:G:A	rs10283127	G	A	A	Sox2_MA0143.3	-11	0	+	0	0	.
chr8	56448733	56448734	chr8:56448734:C:T	rs2576575	C	T	T	Sox2_MA0143.3	15	0	-	0	0	.
chr8	56522555	56522556	chr8:56522556:C:T	rs10106979	C	T	C	Sox2_MA0143.3	24	0	-	0	0	.
chr8	56569407	56569408	chr8:56569408:A:C	rs2610016	A	C	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr8	56910414	56910415	chr8:56910415:G:T	rs149176967	G	T	G	Sox2_MA0143.3	11	0	-	0	0	.
chr8	57219286	57219287	chr8:57219287:T:G	rs55714371	T	G	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr8	57220972	57220973	chr8:57220973:A:G	rs11786074	A	G	G	Sox2_MA0143.3	18	0	+	0	0	.
chr8	57398898	57398899	chr8:57398899:T:G	rs78427173	T	G	T	Sox2_MA0143.3	-9	0	-	0	0	.
chr8	57398983	57398984	chr8:57398984:A:C	rs62514775	A	C	A	Sox2_MA0143.3	-1	0	-	0	0	.
chr8	57446680	57446681	chr8:57446681:C:A	rs6991253	C	A	A	Sox2_MA0143.3	5	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr8	57466318	57466319	chr8:57466319:A:C	rs7003317	A	C	A	Sox2_MA0143.3	-1	0	-	0	0	.
chr8	57550563	57550564	chr8:57550564:C:T	rs73681910	C	T	C	Sox2_MA0143.3	-12	0	-	0	0	.
chr8	57587358	57587359	chr8:57587359:C:A	rs6471633	C	A	C	Sox2_MA0143.3	5	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr8	57693519	57693520	chr8:57693520:G:C	rs13266423	G	C	G	Sox2_MA0143.3	-2	0	+	0	0	.
chr8	57874494	57874495	chr8:57874495:C:A	rs190775013	C	A	C	Sox2_MA0143.3	25	0	+	0	0	.
chr8	57997247	57997248	chr8:57997248:C:T	rs144748563	C	T	C	Sox2_MA0143.3	16	0	+	0	0	.
chr8	58089052	58089053	chr8:58089053:G:A	rs6471680	G	A	A	Sox2_MA0143.3	-9	0	-	0	0	.
chr8	58172891	58172892	chr8:58172892:C:T	rs13260332	C	T	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr8	58218218	58218219	chr8:58218219:G:A	rs117352578	G	A	G	Sox2_MA0143.3	25	0	+	0	0	.
chr8	58235696	58235697	chr8:58235697:T:C	rs4448263	T	C	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr8	58352792	58352793	chr8:58352793:T:C	rs10808694	T	C	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr8	58594795	58594796	chr8:58594796:T:C	rs73250303	T	C	T	Sox2_MA0143.3	3	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr8	58763711	58763712	chr8:58763712:C:T	rs28375401	C	T	T	Sox2_MA0143.3	17	0	-	0	0	.
chr8	58763735	58763736	chr8:58763736:C:T	rs150809177	C	T	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr8	58768766	58768767	chr8:58768767:T:C	rs2634517	T	C	C	Sox2_MA0143.3	23	0	-	0	0	.
chr8	58772881	58772882	chr8:58772882:C:T	rs2634526	C	T	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr8	58800639	58800640	chr8:58800640:A:G	rs2726598	A	G	G	Sox2_MA0143.3	24	0	+	0	0	.
chr8	58801065	58801066	chr8:58801066:T:G	rs28622145	T	G	T	Sox2_MA0143.3	3	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr8	58856560	58856561	chr8:58856561:G:A	rs2726552	G	A	A	Sox2_MA0143.3	14	0	+	0	0	.
chr8	58877013	58877014	chr8:58877014:A:T	rs77302363	A	T	A	Sox2_MA0143.3	25	0	-	0	0	.
chr8	58877140	58877141	chr8:58877141:T:A	rs2594954	T	A	A	Sox2_MA0143.3	-8	0	-	0	0	.
chr8	58880240	58880241	chr8:58880241:A:G	rs2726557	A	G	G	Sox2_MA0143.3	6	1	-	9.019595766176417	2.110840986861197	CCATTGTC
chr8	58892183	58892184	chr8:58892184:T:G	rs59023019	T	G	T	Sox2_MA0143.3	7	1	+	9.613475778572903	8.676919043985553	CCATTGTT
chr8	58954617	58954618	chr8:58954618:G:A	rs56073120	G	A	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr8	58965673	58965674	chr8:58965674:C:T	rs2168409	C	T	T	Sox2_MA0143.3	5	1	-	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr8	58979343	58979344	chr8:58979344:A:G	rs7845949	A	G	A	Sox2_MA0143.3	24	0	-	0	0	.
chr8	59001943	59001944	chr8:59001944:T:C	rs379881	T	C	T	Sox2_MA0143.3	2	1	-	9.019595766176417	2.900948058900136	CCATTGTC
chr8	59115801	59115802	chr8:59115802:A:G	rs138103900	A	G	A	Sox2_MA0143.3	15	0	-	0	0	.
chr8	59266203	59266204	chr8:59266204:A:G	rs146830105	A	G	A	Sox2_MA0143.3	13	0	-	0	0	.
chr8	59383118	59383119	chr8:59383119:G:A	rs10106928	G	A	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr8	59687721	59687722	chr8:59687722:G:A	rs6981960	G	A	A	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr8	59776455	59776456	chr8:59776456:T:A	rs2175385	T	A	T	Sox2_MA0143.3	-7	0	-	0	0	.
chr8	59847542	59847543	chr8:59847543:A:G	rs184465509	A	G	A	Sox2_MA0143.3	-6	0	-	0	0	.
chr8	60278239	60278240	chr8:60278240:G:C	rs4737556	G	C	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr8	60516711	60516712	chr8:60516712:C:G	rs973559148	C	G	C	Sox2_MA0143.3	12	0	+	0	0	.
chr8	60643865	60643866	chr8:60643866:T:G	rs7822621	T	G	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr8	60651387	60651388	chr8:60651388:C:T	rs78542490	C	T	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr8	60678876	60678877	chr8:60678877:C:G	chr8:60678877:C:G	C	G	C	Sox2_MA0143.3	19	0	-	0	0	.
chr8	60678876	60678877	chr8:60678877:C:T	rs113958504	C	T	C	Sox2_MA0143.3	19	0	-	0	0	.
chr8	60716013	60716014	chr8:60716014:C:T	rs6471896	C	T	T	Sox2_MA0143.3	9	0	+	0	0	.
chr8	60744581	60744582	chr8:60744582:A:G	rs11993490	A	G	G	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr8	60786234	60786235	chr8:60786235:C:T	rs147304747	C	T	C	Sox2_MA0143.3	10	0	+	0	0	.
chr8	60872441	60872442	chr8:60872442:T:A	rs16926528	T	A	T	Sox2_MA0143.3	14	0	+	0	0	.
chr8	60926292	60926293	chr8:60926293:T:C	rs16926588	T	C	T	Sox2_MA0143.3	-2	0	+	0	0	.
chr8	60935884	60935885	chr8:60935885:T:G	rs10957170	T	G	G	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr8	60943480	60943481	chr8:60943481:C:T	rs72652574	C	T	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr8	60950224	60950225	chr8:60950225:A:G	rs28535141	A	G	A	Sox2_MA0143.3	-1	0	-	0	0	.
chr8	60950226	60950227	chr8:60950227:G:A	rs11995686	G	A	G	Sox2_MA0143.3	-3	0	-	0	0	.
chr8	61091112	61091113	chr8:61091113:C:T	rs73685716	C	T	C	Sox2_MA0143.3	27	0	-	0	0	.
chr8	61138967	61138968	chr8:61138968:T:C	rs73685743	T	C	T	Sox2_MA0143.3	12	0	-	0	0	.
chr8	61205460	61205461	chr8:61205461:C:T	rs2978527	C	T	T	Sox2_MA0143.3	-2	0	+	0	0	.
chr8	61236037	61236038	chr8:61236038:A:T	rs10110755	A	T	A	Sox2_MA0143.3	8	0	+	0	0	.
chr8	61311591	61311592	chr8:61311592:T:C	rs145187932	T	C	T	Sox2_MA0143.3	13	0	-	0	0	.
chr8	61563438	61563439	chr8:61563439:G:A	rs747739439	G	A	G	Sox2_MA0143.3	10	0	-	0	0	.
chr8	61659059	61659060	chr8:61659060:T:C	rs72659032	T	C	T	Sox2_MA0143.3	19	0	-	0	0	.
chr8	61698676	61698677	chr8:61698677:C:G	rs189681712	C	G	C	Sox2_MA0143.3	19	0	+	0	0	.
chr8	61728764	61728765	chr8:61728765:G:T	rs7013535	G	T	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr8	61734068	61734069	chr8:61734069:G:A	rs11985166	G	A	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr8	61759412	61759413	chr8:61759413:A:C	rs13262020	A	C	A	Sox2_MA0143.3	-20	0	+	0	0	.
chr8	61763970	61763971	chr8:61763971:C:A	rs13275357	C	A	C	Sox2_MA0143.3	12	0	+	0	0	.
chr8	61773479	61773480	chr8:61773480:T:C	rs73682364	T	C	T	Sox2_MA0143.3	21	0	+	0	0	.
chr8	61781198	61781199	chr8:61781199:T:G	rs62506023	T	G	T	Sox2_MA0143.3	8	0	-	0	0	.
chr8	61786051	61786052	chr8:61786052:C:T	rs7012553	C	T	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr8	61813065	61813066	chr8:61813066:T:C	rs34219337	T	C	C	Sox2_MA0143.3	11	0	+	0	0	.
chr8	61819990	61819991	chr8:61819991:A:G	rs1948507	A	G	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr8	61843066	61843067	chr8:61843067:C:A	rs775132000	C	A	C	Sox2_MA0143.3	-20	0	-	0	0	.
chr8	61925501	61925502	chr8:61925502:T:C	rs7842255	T	C	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr8	61946672	61946673	chr8:61946673:T:C	rs7834761	T	C	C	Sox2_MA0143.3	22	0	-	0	0	.
chr8	62027587	62027588	chr8:62027588:T:C	rs344211	T	C	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr8	62027607	62027608	chr8:62027608:G:A	rs16928247	G	A	A	Sox2_MA0143.3	19	0	+	0	0	.
chr8	62217703	62217704	chr8:62217704:T:C	rs113076987	T	C	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr8	62248902	62248903	chr8:62248903:G:A	rs2272014	G	A	G	Sox2_MA0143.3	15	0	-	0	0	.
chr8	62341853	62341854	chr8:62341854:G:A	rs12114607	G	A	G	Sox2_MA0143.3	1	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr8	62473423	62473424	chr8:62473424:T:C	rs1376760	T	C	T	Sox2_MA0143.3	-8	0	-	0	0	.
chr8	62643707	62643708	chr8:62643708:A:G	chr8:62643708:A:G	A	G	A	Sox2_MA0143.3	22	0	+	0	0	.
chr8	62872248	62872249	chr8:62872249:T:G	rs34597813	T	G	T	Sox2_MA0143.3	14	0	+	0	0	.
chr8	63037352	63037353	chr8:63037353:G:A	rs3780126	G	A	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr8	63124387	63124388	chr8:63124388:C:A	rs59213561	C	A	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr8	63146759	63146760	chr8:63146760:G:A	rs56055125	G	A	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr8	63168651	63168652	chr8:63168652:C:G	rs554395869	C	G	C	Sox2_MA0143.3	11	0	+	0	0	.
chr8	63168652	63168653	chr8:63168653:C:G	rs576072115	C	G	C	Sox2_MA0143.3	12	0	+	0	0	.
chr8	63192203	63192204	chr8:63192204:T:C	rs183233929	T	C	T	Sox2_MA0143.3	-3	0	+	0	0	.
chr8	63192204	63192205	chr8:63192205:A:C	rs4739067	A	C	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr8	63204007	63204008	chr8:63204008:T:G	rs899328057	T	G	T	Sox2_MA0143.3	11	0	+	0	0	.
chr8	63286634	63286635	chr8:63286635:T:C	rs78640174	T	C	T	Sox2_MA0143.3	14	0	-	0	0	.
chr8	63605263	63605264	chr8:63605264:G:A	rs1901586	G	A	G	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr8	63605282	63605283	chr8:63605283:A:C	rs991220315	A	C	A	Sox2_MA0143.3	-19	0	-	0	0	.
chr8	63621371	63621372	chr8:63621372:G:A	rs1149454	G	A	G	Sox2_MA0143.3	12	0	-	0	0	.
chr8	63860241	63860242	chr8:63860242:G:A	rs113890340	G	A	G	Sox2_MA0143.3	25	0	+	0	0	.
chr8	64380016	64380017	chr8:64380017:G:T	rs114062391	G	T	G	Sox2_MA0143.3	19	0	-	0	0	.
chr8	64391553	64391554	chr8:64391554:G:A	rs298184	G	A	A	Sox2_MA0143.3	26	0	+	0	0	.
chr8	64586634	64586635	chr8:64586635:T:G	rs2280870	T	G	G	Sox2_MA0143.3	23	0	-	0	0	.
chr8	64612881	64612882	chr8:64612882:C:T	rs4465006	C	T	C	Sox2_MA0143.3	1	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr8	64641051	64641052	chr8:64641052:T:C	rs954487097	T	C	T	Sox2_MA0143.3	6	1	+	8.676919043985553	1.7681642646703326	CCATTGTG
chr8	64695682	64695683	chr8:64695683:T:C	rs13277887	T	C	T	Sox2_MA0143.3	27	0	-	0	0	.
chr8	64695687	64695688	chr8:64695688:A:G	chr8:64695688:A:G	A	G	A	Sox2_MA0143.3	22	0	-	0	0	.
chr8	64820011	64820012	chr8:64820012:A:G	rs34183793	A	G	A	Sox2_MA0143.3	-3	0	+	0	0	.
chr8	64918966	64918967	chr8:64918967:G:A	rs58162443	G	A	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr8	65152645	65152646	chr8:65152646:A:G	rs4342643	A	G	A	Sox2_MA0143.3	-15	0	+	0	0	.
chr8	65165170	65165171	chr8:65165171:C:T	rs6994676	C	T	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr8	65271808	65271809	chr8:65271809:T:C	rs1473923	T	C	T	Sox2_MA0143.3	6	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr8	65277643	65277644	chr8:65277644:A:G	rs10481241	A	G	G	Sox2_MA0143.3	20	0	-	0	0	.
chr8	65284498	65284499	chr8:65284499:T:C	rs35147295	T	C	T	Sox2_MA0143.3	-19	0	+	0	0	.
chr8	65562644	65562645	chr8:65562645:G:A	rs62507573	G	A	G	Sox2_MA0143.3	26	0	-	0	0	.
chr8	65562659	65562660	chr8:65562660:A:G	rs138689123	A	G	A	Sox2_MA0143.3	11	0	-	0	0	.
chr8	65636818	65636819	chr8:65636819:T:A	rs78775765	T	A	T	Sox2_MA0143.3	-11	0	+	0	0	.
chr8	65842732	65842733	chr8:65842733:C:T	rs114210454	C	T	C	Sox2_MA0143.3	11	0	-	0	0	.
chr8	65842835	65842836	chr8:65842836:A:C	chr8:65842836:A:C	A	C	A	Sox2_MA0143.3	-16	0	-	0	0	.
chr8	65888281	65888282	chr8:65888282:G:A	rs78003591	G	A	A	Sox2_MA0143.3	-8	0	-	0	0	.
chr8	65933787	65933788	chr8:65933788:C:T	rs185972274	C	T	C	Sox2_MA0143.3	12	0	-	0	0	.
chr8	66032878	66032879	chr8:66032879:A:G	rs75877929	A	G	A	Sox2_MA0143.3	-10	0	+	0	0	.
chr8	66115135	66115136	chr8:66115136:C:T	rs61740303	C	T	C	Sox2_MA0143.3	5	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr8	66147017	66147018	chr8:66147018:A:G	rs16932564	A	G	a	Sox2_MA0143.3	22	0	-	0	0	.
chr8	66782047	66782048	chr8:66782048:C:G	rs76378745	C	G	C	Sox2_MA0143.3	1	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr8	67065828	67065829	chr8:67065829:A:C	rs150971140	A	C	A	Sox2_MA0143.3	15	0	+	0	0	.
chr8	67195194	67195195	chr8:67195195:C:G	rs2290586	C	G	C	Sox2_MA0143.3	12	0	+	0	0	.
chr8	67390575	67390576	chr8:67390576:C:T	rs78398749	C	T	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr8	67434819	67434820	chr8:67434820:G:A	rs11781908	G	A	g	Sox2_MA0143.3	10	0	-	0	0	.
chr8	67602472	67602473	chr8:67602473:A:G	rs892360648	A	G	A	Sox2_MA0143.3	18	0	-	0	0	.
chr8	67917575	67917576	chr8:67917576:G:A	rs11782672	G	A	G	Sox2_MA0143.3	16	0	+	0	0	.
chr8	67917578	67917579	chr8:67917579:T:C	rs11786238	T	C	T	Sox2_MA0143.3	19	0	+	0	0	.
chr8	68077706	68077707	chr8:68077707:A:G	rs13249671	A	G	C	Sox2_MA0143.3	26	0	-	0	0	.
chr8	68276743	68276744	chr8:68276744:G:T	rs111789586	G	T	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr8	68285800	68285801	chr8:68285801:T:A	rs7843469	T	A	T	Sox2_MA0143.3	9	0	+	0	0	.
chr8	68372900	68372901	chr8:68372901:T:C	rs7000384	T	C	T	Sox2_MA0143.3	-4	0	-	0	0	.
chr8	68490374	68490375	chr8:68490375:T:C	rs73264494	T	C	T	Sox2_MA0143.3	10	0	+	0	0	.
chr8	68509253	68509254	chr8:68509254:G:T	rs6986697	G	T	G	Sox2_MA0143.3	18	0	+	0	0	.
chr8	68760638	68760639	chr8:68760639:G:A	rs78256070	G	A	A	Sox2_MA0143.3	1	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr8	68870531	68870532	chr8:68870532:A:G	rs80225507	A	G	A	Sox2_MA0143.3	4	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr8	69031445	69031446	chr8:69031446:A:G	rs2912498	A	G	A	Sox2_MA0143.3	-9	0	-	0	0	.
chr8	69041377	69041378	chr8:69041378:T:A	rs11774986	T	A	A	Sox2_MA0143.3	23	0	-	0	0	.
chr8	69121407	69121408	chr8:69121408:C:T	rs540617	C	T	C	Sox2_MA0143.3	1	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr8	69121411	69121412	chr8:69121412:G:A	rs539956	G	A	A	Sox2_MA0143.3	5	1	+	8.676919043985553	1.7681642646703324	CCATTGTG
chr8	69161741	69161742	chr8:69161742:A:G	rs520849	A	G	A	Sox2_MA0143.3	-12	0	+	0	0	.
chr8	69313036	69313037	chr8:69313037:C:T	rs67130740	C	T	C	Sox2_MA0143.3	-5	0	-	0	0	.
chr8	69369792	69369793	chr8:69369793:A:C	rs13282235	A	C	C	Sox2_MA0143.3	10	0	-	0	0	.
chr8	69406037	69406038	chr8:69406038:A:G	rs745782877	A	G	A	Sox2_MA0143.3	10	0	-	0	0	.
chr8	69464589	69464590	chr8:69464590:T:C	rs2244817	T	C	C	Sox2_MA0143.3	12	0	+	0	0	.
chr8	69506885	69506886	chr8:69506886:A:G	rs1441198	A	G	G	Sox2_MA0143.3	27	0	-	0	0	.
chr8	69506898	69506899	chr8:69506899:C:G	rs1441197	C	G	G	Sox2_MA0143.3	14	0	-	0	0	.
chr8	69572380	69572381	chr8:69572381:A:G	rs7825887	A	G	A	Sox2_MA0143.3	19	0	-	0	0	.
chr8	69586672	69586673	chr8:69586673:T:C	rs2241881	T	C	T	Sox2_MA0143.3	-13	0	+	0	0	.
chr8	69615839	69615840	chr8:69615840:C:T	rs145354529	C	T	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr8	69663599	69663600	chr8:69663600:T:C	rs13267562	T	C	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr8	69834342	69834343	chr8:69834343:T:C	rs532540279	T	C	t	Sox2_MA0143.3	6	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr8	69871738	69871739	chr8:69871739:A:G	rs13251224	A	G	A	Sox2_MA0143.3	-4	0	-	0	0	.
chr8	69954788	69954789	chr8:69954789:G:A	rs304589	G	A	A	Sox2_MA0143.3	-20	0	-	0	0	.
chr8	70049193	70049194	chr8:70049194:C:T	rs7822888	C	T	T	Sox2_MA0143.3	-13	0	+	0	0	.
chr8	70093369	70093370	chr8:70093370:G:A	rs76513948	G	A	G	Sox2_MA0143.3	9	0	-	0	0	.
chr8	70104115	70104116	chr8:70104116:G:A	rs12056878	G	A	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr8	70121520	70121521	chr8:70121521:T:C	rs181550270	T	C	T	Sox2_MA0143.3	2	1	-	9.613475778572903	3.494828071296623	CCATTGTT
chr8	70185528	70185529	chr8:70185529:T:C	rs6980582	T	C	T	Sox2_MA0143.3	11	0	-	0	0	.
chr8	70227116	70227117	chr8:70227117:G:A	rs4236984	G	A	G	Sox2_MA0143.3	-5	0	+	0	0	.
chr8	70446832	70446833	chr8:70446833:G:A	rs77320128	G	A	G	Sox2_MA0143.3	5	1	+	9.206767037375712	2.298012258060492	CCTTTGTC
chr8	70447483	70447484	chr8:70447484:T:C	rs6997604	T	C	C	Sox2_MA0143.3	15	0	+	0	0	.
chr8	70634727	70634728	chr8:70634728:C:T	rs6988053	C	T	C	Sox2_MA0143.3	17	0	+	0	0	.
chr8	70661555	70661556	chr8:70661556:C:T	rs17687336	C	T	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr8	70666605	70666606	chr8:70666606:C:T	rs113026226	C	T	C	Sox2_MA0143.3	8	0	-	0	0	.
chr8	70801897	70801898	chr8:70801898:T:C	rs13257800	T	C	c	Sox2_MA0143.3	-6	0	+	0	0	.
chr8	70835797	70835798	chr8:70835798:T:G	rs1017257073	T	G	T	Sox2_MA0143.3	-6	0	+	0	0	.
chr8	70835817	70835818	chr8:70835818:G:A	rs34870765	G	A	G	Sox2_MA0143.3	14	0	+	0	0	.
chr8	71042947	71042948	chr8:71042948:A:T	rs6472561	A	T	T	Sox2_MA0143.3	6	1	-	8.676919043985553	1.7681642646703326	CCATTGTG
chr8	71046682	71046683	chr8:71046683:A:C	rs4738105	A	C	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr8	71219123	71219124	chr8:71219124:G:A	rs73684719	G	A	G	Sox2_MA0143.3	8	0	+	0	0	.
chr8	71253755	71253756	chr8:71253756:A:T	rs1900078	A	T	A	Sox2_MA0143.3	6	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr8	71483865	71483866	chr8:71483866:T:C	rs3935605	T	C	C	Sox2_MA0143.3	24	0	-	0	0	.
chr8	71696939	71696940	chr8:71696940:C:T	rs34554315	C	T	C	Sox2_MA0143.3	1	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr8	71711520	71711521	chr8:71711521:C:T	rs79416294	C	T	C	Sox2_MA0143.3	1	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr8	71765113	71765114	chr8:71765114:C:T	rs4300047	C	T	C	Sox2_MA0143.3	16	0	+	0	0	.
chr8	71798069	71798070	chr8:71798070:A:T	rs28523719	A	T	A	Sox2_MA0143.3	-5	0	-	0	0	.
chr8	71842266	71842267	chr8:71842267:G:A	rs3824153	G	A	C	Sox2_MA0143.3	23	0	+	0	0	.
chr8	71907278	71907279	chr8:71907279:C:G	rs16937861	C	G	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr8	71912614	71912615	chr8:71912615:C:G	rs9298185	C	G	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr8	72000375	72000376	chr8:72000376:C:T	rs117389196	C	T	C	Sox2_MA0143.3	26	0	+	0	0	.
chr8	72250294	72250295	chr8:72250295:C:A	rs4738225	C	A	C	Sox2_MA0143.3	18	0	-	0	0	.
chr8	72542628	72542629	chr8:72542629:T:A	rs16938235	T	A	T	Sox2_MA0143.3	19	0	+	0	0	.
chr8	72677382	72677383	chr8:72677383:G:C	rs2439335	G	C	C	Sox2_MA0143.3	13	0	+	0	0	.
chr8	72678200	72678201	chr8:72678201:T:A	rs2256909	T	A	A	Sox2_MA0143.3	-5	0	+	0	0	.
chr8	72796733	72796734	chr8:72796734:T:C	rs877521	T	C	T	Sox2_MA0143.3	3	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr8	72821825	72821826	chr8:72821826:G:A	rs55929235	G	A	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr8	72970311	72970312	chr8:72970312:A:G	rs7828514	A	G	A	Sox2_MA0143.3	12	0	-	0	0	.
chr8	73009521	73009522	chr8:73009522:C:G	rs55653681	C	G	C	Sox2_MA0143.3	25	0	+	0	0	.
chr8	73011924	73011925	chr8:73011925:T:C	rs56129451	T	C	T	Sox2_MA0143.3	-11	0	+	0	0	.
chr8	73106337	73106338	chr8:73106338:C:A	rs72655873	C	A	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr8	73106369	73106370	chr8:73106370:T:C	rs6472737	T	C	C	Sox2_MA0143.3	21	0	+	0	0	.
chr8	73136380	73136381	chr8:73136381:C:G	rs146197132	C	G	C	Sox2_MA0143.3	26	0	+	0	0	.
chr8	73155259	73155260	chr8:73155260:G:A	rs13278169	G	A	G	Sox2_MA0143.3	20	0	+	0	0	.
chr8	73159064	73159065	chr8:73159065:G:A	rs7828743	G	A	G	Sox2_MA0143.3	23	0	+	0	0	.
chr8	73356675	73356676	chr8:73356676:G:A	rs73330994	G	A	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr8	73380573	73380574	chr8:73380574:T:C	rs12678060	T	C	T	Sox2_MA0143.3	-14	0	+	0	0	.
chr8	73490041	73490042	chr8:73490042:T:G	rs11783372	T	G	T	Sox2_MA0143.3	11	0	+	0	0	.
chr8	73530406	73530407	chr8:73530407:G:A	rs11785094	G	A	G	Sox2_MA0143.3	20	0	-	0	0	.
chr8	73530444	73530445	chr8:73530445:G:C	rs7819860	G	C	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr8	73582646	73582647	chr8:73582647:G:A	rs139677417	G	A	G	Sox2_MA0143.3	5	1	+	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr8	73588434	73588435	chr8:73588435:G:A	rs113927591	G	A	G	Sox2_MA0143.3	24	0	+	0	0	.
chr8	73747081	73747082	chr8:73747082:G:A	rs528260851	G	A	G	Sox2_MA0143.3	17	0	+	0	0	.
chr8	73888550	73888551	chr8:73888551:A:G	rs6983756	A	G	A	Sox2_MA0143.3	26	0	+	0	0	.
chr8	74193906	74193907	chr8:74193907:T:G	rs1532577	T	G	G	Sox2_MA0143.3	4	1	+	9.206767037375712	2.2980122580604916	CCTTTGTC
chr8	74275733	74275734	chr8:74275734:C:T	rs759584357	C	T	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr8	74350061	74350062	chr8:74350062:C:A	rs78334365	C	A	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr8	74350877	74350878	chr8:74350878:G:A	rs752708662	G	A	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr8	74350880	74350881	chr8:74350881:G:A	chr8:74350881:G:A	G	A	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr8	74367466	74367467	chr8:74367467:C:G	rs6993852	C	G	C	Sox2_MA0143.3	-5	0	-	0	0	.
chr8	74425286	74425287	chr8:74425287:T:G	rs55780920	T	G	T	Sox2_MA0143.3	2	1	+	9.800647049772198	3.494828071296623	CCTTTGTT
chr8	74492796	74492797	chr8:74492797:G:C	rs66757846	G	C	G	Sox2_MA0143.3	23	0	+	0	0	.
chr8	74567839	74567840	chr8:74567840:G:C	rs13262189	G	C	G	Sox2_MA0143.3	10	0	+	0	0	.
chr8	75120050	75120051	chr8:75120051:T:A	rs77453422	T	A	T	Sox2_MA0143.3	23	0	-	0	0	.
chr8	75125519	75125520	chr8:75125520:G:A	rs7009233	G	A	A	Sox2_MA0143.3	9	0	-	0	0	.
chr8	75125542	75125543	chr8:75125543:T:C	rs73344976	T	C	T	Sox2_MA0143.3	-14	0	-	0	0	.
chr8	75149858	75149859	chr8:75149859:T:G	rs142117542	T	G	T	Sox2_MA0143.3	8	0	+	0	0	.
chr8	75800461	75800462	chr8:75800462:A:G	rs2920919	A	G	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr8	76254710	76254711	chr8:76254711:A:C	rs62515049	A	C	C	Sox2_MA0143.3	26	0	-	0	0	.
chr8	76472482	76472483	chr8:76472483:C:G	rs72670669	C	G	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr8	76483010	76483011	chr8:76483011:T:C	rs116411034	T	C	T	Sox2_MA0143.3	-15	0	-	0	0	.
chr8	76507532	76507533	chr8:76507533:G:A	rs10216685	G	A	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr8	76758636	76758637	chr8:76758637:G:C	rs7006888	G	C	G	Sox2_MA0143.3	16	0	-	0	0	.
chr8	76814890	76814891	chr8:76814891:G:C	rs2733726	G	C	G	Sox2_MA0143.3	13	0	+	0	0	.
chr8	76902127	76902128	chr8:76902128:T:A	rs6472992	T	A	T	Sox2_MA0143.3	26	0	+	0	0	.
chr8	76922748	76922749	chr8:76922749:A:G	rs7819311	A	G	G	Sox2_MA0143.3	8	0	-	0	0	.
chr8	76922776	76922777	chr8:76922777:T:C	rs79841398	T	C	T	Sox2_MA0143.3	-20	0	-	0	0	.
chr8	77057352	77057353	chr8:77057353:T:C	rs62517967	T	C	T	Sox2_MA0143.3	-14	0	+	0	0	.
chr8	77539525	77539526	chr8:77539526:A:T	rs1236796554	A	T	A	Sox2_MA0143.3	-4	0	+	0	0	.
chr8	77551302	77551303	chr8:77551303:T:A	rs426716	T	A	A	Sox2_MA0143.3	-8	0	+	0	0	.
chr8	77553043	77553044	chr8:77553044:G:C	rs421501	G	C	C	Sox2_MA0143.3	16	0	-	0	0	.
chr8	77652038	77652039	chr8:77652039:A:C	rs12334948	A	C	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr8	77686732	77686733	chr8:77686733:T:A	rs4451300	T	A	A	Sox2_MA0143.3	-16	0	-	0	0	.
chr8	78084657	78084658	chr8:78084658:A:C	rs2466739	A	C	A	Sox2_MA0143.3	-5	0	-	0	0	.
chr8	78133066	78133067	chr8:78133067:A:G	rs13251222	A	G	A	Sox2_MA0143.3	3	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr8	78195871	78195872	chr8:78195872:T:C	rs4551342	T	C	T	Sox2_MA0143.3	-17	0	+	0	0	.
chr8	78195903	78195904	chr8:78195904:G:A	rs2369096	G	A	G	Sox2_MA0143.3	15	0	+	0	0	.
chr8	78552645	78552646	chr8:78552646:T:C	rs17411123	T	C	T	Sox2_MA0143.3	-11	0	-	0	0	.
chr8	78665870	78665871	chr8:78665871:A:G	rs868769178	A	G	A	Sox2_MA0143.3	6	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr8	78749582	78749583	chr8:78749583:T:G	rs113749614	T	G	T	Sox2_MA0143.3	22	0	+	0	0	.
chr8	78900118	78900119	chr8:78900119:C:T	rs10106730	C	T	C	Sox2_MA0143.3	5	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr8	78930031	78930032	chr8:78930032:G:C	rs1509312	G	C	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr8	79131596	79131597	chr8:79131597:G:A	rs17440838	G	A	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr8	79213790	79213791	chr8:79213791:T:A	rs1380638	T	A	T	Sox2_MA0143.3	23	0	+	0	0	.
chr8	79325337	79325338	chr8:79325338:C:T	rs60752249	C	T	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr8	79500029	79500030	chr8:79500030:C:A	rs756371149	C	A	c	Sox2_MA0143.3	23	0	-	0	0	.
chr8	79667793	79667794	chr8:79667794:G:T	rs79742434	G	T	g	Sox2_MA0143.3	-3	0	-	0	0	.
chr8	79673577	79673578	chr8:79673578:A:T	rs11786782	A	T	T	Sox2_MA0143.3	-10	0	+	0	0	.
chr8	79692900	79692901	chr8:79692901:T:C	rs78799958	T	C	T	Sox2_MA0143.3	4	1	+	9.206767037375712	2.2980122580604916	CCTTTGTC
chr8	79692907	79692908	chr8:79692908:A:G	rs2440633	A	G	G	Sox2_MA0143.3	11	0	+	0	0	.
chr8	79721030	79721031	chr8:79721031:A:G	rs2947545	A	G	A	Sox2_MA0143.3	14	0	-	0	0	.
chr8	79737752	79737753	chr8:79737753:A:G	rs2467783	A	G	A	Sox2_MA0143.3	3	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr8	79960986	79960987	chr8:79960987:G:C	rs73691118	G	C	G	Sox2_MA0143.3	7	1	-	9.019595766176417	8.676919043985553	CCATTGTC
chr8	80136746	80136747	chr8:80136747:G:A	rs12676043	G	A	A	Sox2_MA0143.3	1	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr8	80182673	80182674	chr8:80182674:T:C	rs7822795	T	C	T	Sox2_MA0143.3	-8	0	+	0	0	.
chr8	80249263	80249264	chr8:80249264:G:A	rs11785423	G	A	A	Sox2_MA0143.3	-17	0	+	0	0	.
chr8	80257413	80257414	chr8:80257414:A:G	rs1199831814	A	G	A	Sox2_MA0143.3	-17	0	+	0	0	.
chr8	80279601	80279602	chr8:80279602:G:A	rs75661016	G	A	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr8	80279616	80279617	chr8:80279617:G:A	rs73691355	G	A	G	Sox2_MA0143.3	14	0	+	0	0	.
chr8	80297615	80297616	chr8:80297616:A:C	rs190393098	A	C	A	Sox2_MA0143.3	15	0	-	0	0	.
chr8	80435514	80435515	chr8:80435515:T:C	rs116794789	T	C	T	Sox2_MA0143.3	8	0	-	0	0	.
chr8	80436119	80436120	chr8:80436120:A:G	rs192822130	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr8	80487205	80487206	chr8:80487206:T:G	chr8:80487206:T:G	T	G	T	Sox2_MA0143.3	14	0	-	0	0	.
chr8	80579899	80579900	chr8:80579900:A:C	rs139285464	A	C	A	Sox2_MA0143.3	-17	0	-	0	0	.
chr8	80588909	80588910	chr8:80588910:T:C	rs36128702	T	C	T	Sox2_MA0143.3	-17	0	+	0	0	.
chr8	80679299	80679300	chr8:80679300:T:C	rs73691994	T	C	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr8	80679339	80679340	chr8:80679340:T:C	rs73691995	T	C	T	Sox2_MA0143.3	22	0	+	0	0	.
chr8	80727940	80727941	chr8:80727941:G:A	rs75258853	G	A	G	Sox2_MA0143.3	23	0	-	0	0	.
chr8	80791922	80791923	chr8:80791923:G:A	rs11987529	G	A	A	Sox2_MA0143.3	23	0	-	0	0	.
chr8	80924225	80924226	chr8:80924226:C:T	rs16908136	C	T	C	Sox2_MA0143.3	27	0	-	0	0	.
chr8	80947151	80947152	chr8:80947152:C:T	rs1438224	C	T	C	Sox2_MA0143.3	23	0	-	0	0	.
chr8	81034880	81034881	chr8:81034881:G:C	chr8:81034881:G:C	G	C	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr8	81089124	81089125	chr8:81089125:C:G	rs13273982	C	G	G	Sox2_MA0143.3	15	0	-	0	0	.
chr8	81105696	81105697	chr8:81105697:G:A	rs4500045	G	A	G	Sox2_MA0143.3	-16	0	-	0	0	.
chr8	81112314	81112315	chr8:81112315:C:G	rs111431598	C	G	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr8	81130491	81130492	chr8:81130492:A:G	rs10464890	A	G	A	Sox2_MA0143.3	4	1	-	9.206767037375712	2.2980122580604916	CCTTTGTC
chr8	81133026	81133027	chr8:81133027:A:C	rs10088396	A	C	C	Sox2_MA0143.3	17	0	-	0	0	.
chr8	81227106	81227107	chr8:81227107:A:C	rs56054268	A	C	A	Sox2_MA0143.3	21	0	-	0	0	.
chr8	81240986	81240987	chr8:81240987:A:G	rs13277668	A	G	A	Sox2_MA0143.3	-13	0	-	0	0	.
chr8	81274516	81274517	chr8:81274517:G:T	rs189663203	G	T	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr8	81513183	81513184	chr8:81513184:T:G	rs73275421	T	G	G	Sox2_MA0143.3	6	1	+	8.676919043985553	1.7681642646703326	CCATTGTG
chr8	81606276	81606277	chr8:81606277:A:G	rs3898300	A	G	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr8	81779057	81779058	chr8:81779058:A:G	rs111928163	A	G	A	Sox2_MA0143.3	14	0	-	0	0	.
chr8	82188697	82188698	chr8:82188698:A:G	rs11993872	A	G	A	Sox2_MA0143.3	3	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr8	82190730	82190731	chr8:82190731:G:C	rs72603876	G	C	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr8	82740769	82740770	chr8:82740770:C:G	rs17732805	C	G	C	Sox2_MA0143.3	8	0	-	0	0	.
chr8	82844964	82844965	chr8:82844965:A:G	rs72679890	A	G	G	Sox2_MA0143.3	18	0	-	0	0	.
chr8	82863111	82863112	chr8:82863112:T:C	rs12541378	T	C	T	Sox2_MA0143.3	9	0	-	0	0	.
chr8	83260242	83260243	chr8:83260243:C:T	rs13249476	C	T	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr8	83332182	83332183	chr8:83332183:A:G	rs2685627	A	G	A	Sox2_MA0143.3	-9	0	+	0	0	.
chr8	83364391	83364392	chr8:83364392:A:G	rs28665331	A	G	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr8	83828447	83828448	chr8:83828448:A:G	rs60745495	A	G	A	Sox2_MA0143.3	16	0	-	0	0	.
chr8	84000607	84000608	chr8:84000608:T:A	rs1442042	T	A	T	Sox2_MA0143.3	-15	0	-	0	0	.
chr8	84182354	84182355	chr8:84182355:C:G	rs73294131	C	G	.	Sox2_MA0143.3	24	0	-	0	0	.
chr8	84294684	84294685	chr8:84294685:G:C	rs60414985	G	C	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr8	84320233	84320234	chr8:84320234:G:A	rs73306951	G	A	A	Sox2_MA0143.3	19	0	+	0	0	.
chr8	84329039	84329040	chr8:84329040:T:C	rs73293013	T	C	C	Sox2_MA0143.3	6	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr8	85107382	85107383	chr8:85107383:G:A	rs369075882	G	A	G	Sox2_MA0143.3	7	1	-	9.206767037375712	9.800647049772198	CCTTTGTC
chr8	85263850	85263851	chr8:85263851:T:G	rs7827242	T	G	T	Sox2_MA0143.3	-18	0	+	0	0	.
chr8	85326147	85326148	chr8:85326148:A:G	rs118144335	A	G	A	Sox2_MA0143.3	16	0	-	0	0	.
chr8	85350597	85350598	chr8:85350598:A:G	rs117267733	A	G	A	Sox2_MA0143.3	27	0	+	0	0	.
chr8	85535478	85535479	chr8:85535479:C:T	rs414922	C	T	T	Sox2_MA0143.3	16	0	+	0	0	.
chr8	85570928	85570929	chr8:85570929:G:C	rs7002221	G	C	G	Sox2_MA0143.3	21	0	-	0	0	.
chr8	85582308	85582309	chr8:85582309:G:A	rs13270013	G	A	G	Sox2_MA0143.3	27	0	-	0	0	.
chr8	85974623	85974624	chr8:85974624:A:G	rs10504815	A	G	A	Sox2_MA0143.3	4	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr8	86033482	86033483	chr8:86033483:T:A	rs148724466	T	A	T	Sox2_MA0143.3	-12	0	+	0	0	.
chr8	86033485	86033486	chr8:86033486:G:T	rs56137614	G	T	G	Sox2_MA0143.3	-9	0	+	0	0	.
chr8	86095470	86095471	chr8:86095471:G:A	rs62509933	G	A	G	Sox2_MA0143.3	15	0	-	0	0	.
chr8	86125388	86125389	chr8:86125389:C:T	rs73688593	C	T	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr8	86148149	86148150	chr8:86148150:A:G	rs2721247	A	G	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr8	86148157	86148158	chr8:86148158:T:C	rs2626343	T	C	T	Sox2_MA0143.3	-5	0	+	0	0	.
chr8	86148187	86148188	chr8:86148188:T:C	rs10283072	T	C	T	Sox2_MA0143.3	25	0	+	0	0	.
chr8	86295840	86295841	chr8:86295841:G:A	rs1595207	G	A	A	Sox2_MA0143.3	18	0	+	0	0	.
chr8	86828565	86828566	chr8:86828566:A:T	rs112822152	A	T	A	Sox2_MA0143.3	4	1	-	9.206767037375712	2.2980122580604916	CCTTTGTC
chr8	86947731	86947732	chr8:86947732:G:A	rs12155730	G	A	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr8	87533128	87533129	chr8:87533129:G:A	rs9694630	G	A	G	Sox2_MA0143.3	26	0	-	0	0	.
chr8	87723544	87723545	chr8:87723545:T:G	rs13266551	T	G	T	Sox2_MA0143.3	21	0	-	0	0	.
chr8	88001072	88001073	chr8:88001073:C:T	rs17646041	C	T	C	Sox2_MA0143.3	9	0	-	0	0	.
chr8	88024350	88024351	chr8:88024351:T:C	rs2616483	T	C	G	Sox2_MA0143.3	13	0	-	0	0	.
chr8	88233633	88233634	chr8:88233634:C:A	rs13251664	C	A	A	Sox2_MA0143.3	-15	0	-	0	0	.
chr8	88244090	88244091	chr8:88244091:G:A	rs28904599	G	A	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr8	88410359	88410360	chr8:88410360:T:C	rs28671153	T	C	C	Sox2_MA0143.3	18	0	+	0	0	.
chr8	89201362	89201363	chr8:89201363:T:G	rs75458468	T	G	T	Sox2_MA0143.3	-8	0	+	0	0	.
chr8	89216550	89216551	chr8:89216551:G:A	rs318263	G	A	G	Sox2_MA0143.3	11	0	+	0	0	.
chr8	89253491	89253492	chr8:89253492:G:A	rs74365837	G	A	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr8	89350974	89350975	chr8:89350975:A:T	rs7018458	A	T	T	Sox2_MA0143.3	6	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr8	89719985	89719986	chr8:89719986:T:C	rs218902	T	C	T	Sox2_MA0143.3	17	0	-	0	0	.
chr8	89801643	89801644	chr8:89801644:C:A	rs406680	C	A	A	Sox2_MA0143.3	19	0	+	0	0	.
chr8	89984029	89984030	chr8:89984030:A:G	rs1805844	A	G	G	Sox2_MA0143.3	2	1	+	9.613475778572903	3.494828071296623	CCATTGTT
chr8	90082310	90082311	chr8:90082311:G:T	rs190372128	G	T	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr8	90098093	90098094	chr8:90098094:G:A	rs7459846	G	A	G	Sox2_MA0143.3	-3	0	+	0	0	.
chr8	90318347	90318348	chr8:90318348:C:G	rs180982611	C	G	C	Sox2_MA0143.3	19	0	+	0	0	.
chr8	90344156	90344157	chr8:90344157:A:G	rs7822035	A	G	G	Sox2_MA0143.3	22	0	-	0	0	.
chr8	90440129	90440130	chr8:90440130:A:G	rs76279537	A	G	A	Sox2_MA0143.3	-20	0	+	0	0	.
chr8	90563993	90563994	chr8:90563994:C:T	rs10956720	C	T	C	Sox2_MA0143.3	25	0	-	0	0	.
chr8	90607084	90607085	chr8:90607085:G:A	rs28552751	G	A	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr8	90727000	90727001	chr8:90727001:C:T	rs76915026	C	T	C	Sox2_MA0143.3	7	1	-	8.864090315184848	3.5547341015215945	CCTTTGTG
chr8	90842626	90842627	chr8:90842627:T:C	rs148205837	T	C	T	Sox2_MA0143.3	6	1	+	8.676919043985553	1.7681642646703326	CCATTGTG
chr8	90854076	90854077	chr8:90854077:A:G	rs13264873	A	G	G	Sox2_MA0143.3	18	0	-	0	0	.
chr8	90868858	90868859	chr8:90868859:T:C	rs6986276	T	C	C	Sox2_MA0143.3	10	0	-	0	0	.
chr8	90869035	90869036	chr8:90869036:C:A	rs34637621	C	A	C	Sox2_MA0143.3	25	0	-	0	0	.
chr8	90895262	90895263	chr8:90895263:C:T	rs1011254	C	T	C	Sox2_MA0143.3	17	0	-	0	0	.
chr8	91024721	91024722	chr8:91024722:A:G	rs7837376	A	G	A	Sox2_MA0143.3	26	0	-	0	0	.
chr8	91027451	91027452	chr8:91027452:T:C	rs142743575	T	C	T	Sox2_MA0143.3	4	1	+	9.206767037375712	2.2980122580604916	CCTTTGTC
chr8	91029411	91029412	chr8:91029412:T:C	rs10113460	T	C	T	Sox2_MA0143.3	17	0	+	0	0	.
chr8	91059035	91059036	chr8:91059036:C:A	rs10095630	C	A	A	Sox2_MA0143.3	7	1	-	8.864090315184848	9.800647049772198	CCTTTGTG
chr8	91127025	91127026	chr8:91127026:T:C	rs12544236	T	C	T	Sox2_MA0143.3	-13	0	-	0	0	.
chr8	91514382	91514383	chr8:91514383:C:G	rs75496419	C	G	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr8	91715560	91715561	chr8:91715561:G:T	rs184205891	G	T	G	Sox2_MA0143.3	0	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr8	91731432	91731433	chr8:91731433:T:A	rs77577672	T	A	C	Sox2_MA0143.3	25	0	+	0	0	.
chr8	92108268	92108269	chr8:92108269:T:G	rs140301838	T	G	T	Sox2_MA0143.3	-5	0	+	0	0	.
chr8	92171836	92171837	chr8:92171837:T:C	rs3857914	T	C	T	Sox2_MA0143.3	-20	0	+	0	0	.
chr8	92247178	92247179	chr8:92247179:G:C	rs62518646	G	C	G	Sox2_MA0143.3	1	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr8	92465560	92465561	chr8:92465561:G:A	rs73317897	G	A	G	Sox2_MA0143.3	10	0	-	0	0	.
chr8	92503263	92503264	chr8:92503264:T:C	rs76540015	T	C	T	Sox2_MA0143.3	6	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr8	92571718	92571719	chr8:92571719:T:C	rs1229142890	T	C	T	Sox2_MA0143.3	24	0	-	0	0	.
chr8	92758682	92758683	chr8:92758683:C:T	rs62518750	C	T	C	Sox2_MA0143.3	5	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr8	92965567	92965568	chr8:92965568:A:G	rs440973	A	G	G	Sox2_MA0143.3	26	0	-	0	0	.
chr8	92983260	92983261	chr8:92983261:A:G	rs172160	A	G	G	Sox2_MA0143.3	3	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr8	93020514	93020515	chr8:93020515:G:T	rs2339774	G	T	T	Sox2_MA0143.3	5	1	+	8.676919043985553	1.7681642646703324	CCATTGTG
chr8	93361261	93361262	chr8:93361262:T:C	rs118180878	T	C	T	Sox2_MA0143.3	-10	0	-	0	0	.
chr8	93361271	93361272	chr8:93361272:G:A	rs1015989108	G	A	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr8	93420673	93420674	chr8:93420674:T:C	rs73692813	T	C	T	Sox2_MA0143.3	23	0	+	0	0	.
chr8	93552254	93552255	chr8:93552255:A:G	rs78235967	A	G	A	Sox2_MA0143.3	-11	0	+	0	0	.
chr8	93694210	93694211	chr8:93694211:A:C	rs2976347	A	C	A	Sox2_MA0143.3	-9	0	+	0	0	.
chr8	93846769	93846770	chr8:93846770:G:A	rs939042385	G	A	G	Sox2_MA0143.3	18	0	+	0	0	.
chr8	93891761	93891762	chr8:93891762:T:A	rs4735253	T	A	A	Sox2_MA0143.3	10	0	-	0	0	.
chr8	94059191	94059192	chr8:94059192:T:C	rs3018897	T	C	T	Sox2_MA0143.3	14	0	+	0	0	.
chr8	94196450	94196451	chr8:94196451:G:T	rs874019	G	T	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr8	94198753	94198754	chr8:94198754:C:T	rs78973815	C	T	C	Sox2_MA0143.3	24	0	-	0	0	.
chr8	94198795	94198796	chr8:94198796:T:A	rs146125392	T	A	T	Sox2_MA0143.3	-18	0	-	0	0	.
chr8	94242861	94242862	chr8:94242862:G:A	rs2607071	G	A	G	Sox2_MA0143.3	14	0	-	0	0	.
chr8	94274366	94274367	chr8:94274367:T:C	chr8:94274367:T:C	T	C	T	Sox2_MA0143.3	7	1	+	9.800647049772198	9.206767037375712	CCTTTGTT
chr8	94311104	94311105	chr8:94311105:C:T	rs747790	C	T	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr8	94326977	94326978	chr8:94326978:G:T	rs2470713	G	T	G	Sox2_MA0143.3	23	0	-	0	0	.
chr8	94353312	94353313	chr8:94353313:A:C	rs76242824	A	C	A	Sox2_MA0143.3	19	0	+	0	0	.
chr8	94418030	94418031	chr8:94418031:A:G	chr8:94418031:A:G	A	G	A	Sox2_MA0143.3	-20	0	-	0	0	.
chr8	94436481	94436482	chr8:94436482:A:G	rs3136405	A	G	A	Sox2_MA0143.3	-12	0	+	0	0	.
chr8	94436884	94436885	chr8:94436885:A:G	rs116670995	A	G	A	Sox2_MA0143.3	20	0	+	0	0	.
chr8	94579676	94579677	chr8:94579677:G:A	rs1834525	G	A	A	Sox2_MA0143.3	13	0	+	0	0	.
chr8	94705679	94705680	chr8:94705680:T:C	rs17645441	T	C	T	Sox2_MA0143.3	-2	0	-	0	0	.
chr8	94970901	94970902	chr8:94970902:G:A	rs57890591	G	A	G	Sox2_MA0143.3	10	0	+	0	0	.
chr8	95093631	95093632	chr8:95093632:T:A	rs4321970	T	A	T	Sox2_MA0143.3	8	0	-	0	0	.
chr8	95097988	95097989	chr8:95097989:G:A	rs11782021	G	A	G	Sox2_MA0143.3	20	0	+	0	0	.
chr8	95139238	95139239	chr8:95139239:C:G	rs181451788	C	G	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr8	95254712	95254713	chr8:95254713:A:G	rs4492337	A	G	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr8	95354158	95354159	chr8:95354159:G:A	rs79898938	G	A	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr8	95382087	95382088	chr8:95382088:A:C	chr8:95382088:A:C	A	C	G	Sox2_MA0143.3	21	0	-	0	0	.
chr8	95382087	95382088	chr8:95382088:A:G	rs4146363	A	G	G	Sox2_MA0143.3	21	0	-	0	0	.
chr8	95448982	95448983	chr8:95448983:A:G	rs6999794	A	G	A	Sox2_MA0143.3	-16	0	+	0	0	.
chr8	95520396	95520397	chr8:95520397:T:G	rs1500906	T	G	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr8	95645617	95645618	chr8:95645618:C:T	rs936747	C	T	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr8	95746697	95746698	chr8:95746698:A:C	rs10103791	A	C	A	Sox2_MA0143.3	19	0	-	0	0	.
chr8	95800701	95800702	chr8:95800702:C:A	rs146428964	C	A	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr8	95800735	95800736	chr8:95800736:C:T	chr8:95800736:C:T	C	T	C	Sox2_MA0143.3	16	0	+	0	0	.
chr8	95847394	95847395	chr8:95847395:A:G	rs17688634	A	G	A	Sox2_MA0143.3	-6	0	-	0	0	.
chr8	95847570	95847571	chr8:95847571:G:A	rs74873013	G	A	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr8	96104250	96104251	chr8:96104251:T:C	rs80264598	T	C	T	Sox2_MA0143.3	3	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr8	96143472	96143473	chr8:96143473:C:G	rs80085212	C	G	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr8	96143478	96143479	chr8:96143479:G:T	rs77181285	G	T	G	Sox2_MA0143.3	-14	0	+	0	0	.
chr8	96145823	96145824	chr8:96145824:C:T	rs147989354	C	T	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr8	96275623	96275624	chr8:96275624:T:C	rs7014812	T	C	T	Sox2_MA0143.3	20	0	-	0	0	.
chr8	96328016	96328017	chr8:96328017:C:T	rs142461281	C	T	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr8	96330307	96330308	chr8:96330308:A:G	rs2280263	A	G	A	Sox2_MA0143.3	2	1	+	9.613475778572903	3.494828071296623	CCATTGTT
chr8	96334912	96334913	chr8:96334913:T:C	rs4734339	T	C	t	Sox2_MA0143.3	-8	0	-	0	0	.
chr8	96338430	96338431	chr8:96338431:G:A	rs62514614	G	A	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr8	96338431	96338432	chr8:96338432:T:G	chr8:96338432:T:G	T	G	T	Sox2_MA0143.3	-5	0	-	0	0	.
chr8	96338435	96338436	chr8:96338436:G:A	rs141767972	G	A	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr8	96342112	96342113	chr8:96342113:A:G	rs6998872	A	G	A	Sox2_MA0143.3	3	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr8	96351951	96351952	chr8:96351952:G:A	rs34701295	G	A	A	Sox2_MA0143.3	-9	0	+	0	0	.
chr8	96359800	96359801	chr8:96359801:A:G	rs7830308	A	G	A	Sox2_MA0143.3	3	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr8	96401997	96401998	chr8:96401998:T:C	rs62516324	T	C	C	Sox2_MA0143.3	11	0	+	0	0	.
chr8	96407306	96407307	chr8:96407307:A:G	rs17783045	A	G	G	Sox2_MA0143.3	6	1	-	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr8	96461812	96461813	chr8:96461813:A:T	rs73269770	A	T	A	Sox2_MA0143.3	-9	0	+	0	0	.
chr8	96482091	96482092	chr8:96482092:A:G	rs1545314	A	G	G	Sox2_MA0143.3	9	0	+	0	0	.
chr8	96482109	96482110	chr8:96482110:G:A	rs1971855	G	A	A	Sox2_MA0143.3	27	0	+	0	0	.
chr8	96520842	96520843	chr8:96520843:A:G	rs2575737	A	G	A	Sox2_MA0143.3	21	0	-	0	0	.
chr8	96520869	96520870	chr8:96520870:T:C	rs193013842	T	C	T	Sox2_MA0143.3	-6	0	-	0	0	.
chr8	96572602	96572603	chr8:96572603:C:A	rs2589191	C	A	C	Sox2_MA0143.3	8	0	-	0	0	.
chr8	96584966	96584967	chr8:96584967:C:A	rs115474998	C	A	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr8	96619920	96619921	chr8:96619921:T:C	rs111607828	T	C	T	Sox2_MA0143.3	15	0	+	0	0	.
chr8	96735309	96735310	chr8:96735310:C:T	rs138320765	C	T	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr8	96841676	96841677	chr8:96841677:G:A	rs6988542	G	A	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr8	96851809	96851810	chr8:96851810:C:T	rs13268611	C	T	T	Sox2_MA0143.3	1	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr8	96958199	96958200	chr8:96958200:G:A	rs77465425	G	A	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr8	97135310	97135311	chr8:97135311:T:C	rs920576	T	C	T	Sox2_MA0143.3	20	0	+	0	0	.
chr8	97142470	97142471	chr8:97142471:G:A	rs76155127	G	A	G	Sox2_MA0143.3	8	0	-	0	0	.
chr8	97275032	97275033	chr8:97275033:A:G	rs2583501	A	G	A	Sox2_MA0143.3	-5	0	-	0	0	.
chr8	97292953	97292954	chr8:97292954:A:G	rs74533725	A	G	A	Sox2_MA0143.3	2	1	+	9.613475778572903	3.494828071296623	CCATTGTT
chr8	97354516	97354517	chr8:97354517:C:T	rs7845554	C	T	T	Sox2_MA0143.3	26	0	+	0	0	.
chr8	97375952	97375953	chr8:97375953:G:C	rs184648679	G	C	G	Sox2_MA0143.3	0	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr8	97377608	97377609	chr8:97377609:C:T	rs16895696	C	T	C	Sox2_MA0143.3	25	0	-	0	0	.
chr8	97433739	97433740	chr8:97433740:T:C	rs187404725	T	C	T	Sox2_MA0143.3	-4	0	-	0	0	.
chr8	97644177	97644178	chr8:97644178:C:T	rs572908844	C	T	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr8	97644185	97644186	chr8:97644186:G:C	rs565176281	G	C	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr8	97644201	97644202	chr8:97644202:C:G	rs116862822	C	G	C	Sox2_MA0143.3	12	0	+	0	0	.
chr8	97745162	97745163	chr8:97745163:C:T	rs2513979	C	T	T	Sox2_MA0143.3	-6	0	-	0	0	.
chr8	97812543	97812544	chr8:97812544:C:T	rs16892209	C	T	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr8	97830554	97830555	chr8:97830555:C:T	rs2245791	C	T	c	Sox2_MA0143.3	-2	0	-	0	0	.
chr8	97849615	97849616	chr8:97849616:T:C	rs11781043	T	C	N	Sox2_MA0143.3	-13	0	-	0	0	.
chr8	97854084	97854085	chr8:97854085:T:C	rs4395870	T	C	C	Sox2_MA0143.3	4	1	+	8.676919043985553	1.7681642646703322	CCATTGTG
chr8	98324262	98324263	chr8:98324263:G:A	rs148137008	G	A	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr8	98354053	98354054	chr8:98354054:C:T	rs7828264	C	T	C	Sox2_MA0143.3	14	0	+	0	0	.
chr8	98478777	98478778	chr8:98478778:T:C	rs10955177	T	C	c	Sox2_MA0143.3	-6	0	-	0	0	.
chr8	98601667	98601668	chr8:98601668:A:C	rs1317714062	A	C	A	Sox2_MA0143.3	-14	0	-	0	0	.
chr8	99087046	99087047	chr8:99087047:C:T	rs13265237	C	T	C	Sox2_MA0143.3	23	0	+	0	0	.
chr8	99408965	99408966	chr8:99408966:C:T	rs1003165	C	T	C	Sox2_MA0143.3	5	1	-	9.613475778572903	2.7047209992576837	CCATTGTT
chr8	99637558	99637559	chr8:99637559:C:G	rs1221674728	C	G	C	Sox2_MA0143.3	15	0	+	0	0	.
chr8	99869693	99869694	chr8:99869694:C:G	rs138091634	C	G	C	Sox2_MA0143.3	9	0	+	0	0	.
chr8	99872092	99872093	chr8:99872093:C:G	rs35509895	C	G	G	Sox2_MA0143.3	18	0	-	0	0	.
chr8	99872094	99872095	chr8:99872095:C:A	rs35769167	C	A	C	Sox2_MA0143.3	16	0	-	0	0	.
chr8	100270856	100270857	chr8:100270857:C:T	rs7837658	C	T	T	Sox2_MA0143.3	-1	0	-	0	0	.
chr8	100310533	100310534	chr8:100310534:C:A	rs1660345	C	A	C	Sox2_MA0143.3	10	0	+	0	0	.
chr8	100360866	100360867	chr8:100360867:C:T	rs16898293	C	T	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr8	100383292	100383293	chr8:100383293:A:G	rs116796001	A	G	A	Sox2_MA0143.3	3	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr8	100434287	100434288	chr8:100434288:T:C	rs75377249	T	C	T	Sox2_MA0143.3	-1	0	+	0	0	.
chr8	100452997	100452998	chr8:100452998:T:C	rs11775541	T	C	T	Sox2_MA0143.3	2	1	-	8.676919043985553	2.5582713367092715	CCATTGTG
chr8	100462986	100462987	chr8:100462987:G:T	rs77667242	G	T	G	Sox2_MA0143.3	14	0	-	0	0	.
chr8	100462992	100462993	chr8:100462993:C:T	rs745346	C	T	C	Sox2_MA0143.3	8	0	-	0	0	.
chr8	100527484	100527485	chr8:100527485:C:T	rs117974498	C	T	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr8	100681298	100681299	chr8:100681299:T:A	rs72681434	T	A	T	Sox2_MA0143.3	19	0	+	0	0	.
chr8	100706775	100706776	chr8:100706776:G:A	rs62513924	G	A	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr8	100754351	100754352	chr8:100754352:T:C	rs2978087	T	C	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr8	100870494	100870495	chr8:100870495:G:A	rs55721520	G	A	A	Sox2_MA0143.3	27	0	-	0	0	.
chr8	100887187	100887188	chr8:100887188:T:G	rs568110627	T	G	T	Sox2_MA0143.3	-5	0	+	0	0	.
chr8	100900208	100900209	chr8:100900209:T:C	rs117842313	T	C	T	Sox2_MA0143.3	-9	0	+	0	0	.
chr8	100900231	100900232	chr8:100900232:T:C	rs112710168	T	C	C	Sox2_MA0143.3	14	0	+	0	0	.
chr8	100953009	100953010	chr8:100953010:G:T	rs139255232	G	T	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr8	100994404	100994405	chr8:100994405:A:T	rs6468748	A	T	A	Sox2_MA0143.3	14	0	-	0	0	.
chr8	101003615	101003616	chr8:101003616:T:C	rs4734506	T	C	C	Sox2_MA0143.3	21	0	-	0	0	.
chr8	101029318	101029319	chr8:101029319:A:T	rs11986397	A	T	a	Sox2_MA0143.3	25	0	-	0	0	.
chr8	101029319	101029320	chr8:101029320:G:T	rs11993635	G	T	G	Sox2_MA0143.3	24	0	-	0	0	.
chr8	101079677	101079678	chr8:101079678:A:G	rs776272	A	G	A	Sox2_MA0143.3	-1	0	+	0	0	.
chr8	101112142	101112143	chr8:101112143:T:A	rs166996	T	A	A	Sox2_MA0143.3	8	0	-	0	0	.
chr8	101112157	101112158	chr8:101112158:C:T	rs144607329	C	T	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr8	101113618	101113619	chr8:101113619:C:T	rs117502771	C	T	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr8	101288058	101288059	chr8:101288059:T:G	rs76116119	T	G	T	Sox2_MA0143.3	11	0	+	0	0	.
chr8	101288071	101288072	chr8:101288072:G:A	rs7843963	G	A	G	Sox2_MA0143.3	24	0	+	0	0	.
chr8	101310661	101310662	chr8:101310662:C:A	rs58766247	C	A	C	Sox2_MA0143.3	27	0	-	0	0	.
chr8	101445057	101445058	chr8:101445058:A:G	rs979891	A	G	A	Sox2_MA0143.3	10	0	-	0	0	.
chr8	101446310	101446311	chr8:101446311:C:T	rs77034719	C	T	C	Sox2_MA0143.3	18	0	-	0	0	.
chr8	101454538	101454539	chr8:101454539:G:T	rs633142	G	T	G	Sox2_MA0143.3	12	0	+	0	0	.
chr8	101538613	101538614	chr8:101538614:G:A	rs17476242	G	A	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr8	101658433	101658434	chr8:101658434:C:T	chr8:101658434:C:T	C	T	A	Sox2_MA0143.3	-20	0	+	0	0	.
chr8	101755769	101755770	chr8:101755770:G:T	rs114554488	G	T	G	Sox2_MA0143.3	23	0	+	0	0	.
chr8	101769875	101769876	chr8:101769876:A:G	rs144606040	A	G	A	Sox2_MA0143.3	-14	0	-	0	0	.
chr8	101769879	101769880	chr8:101769880:T:G	rs10108160	T	G	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr8	101827870	101827871	chr8:101827871:C:T	rs77461731	C	T	T	Sox2_MA0143.3	15	0	+	0	0	.
chr8	102033139	102033140	chr8:102033140:A:T	rs1269704	A	T	A	Sox2_MA0143.3	20	0	+	0	0	.
chr8	102055182	102055183	chr8:102055183:C:T	rs115587102	C	T	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr8	102105434	102105435	chr8:102105435:C:T	rs60659426	C	T	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr8	102233210	102233211	chr8:102233211:G:A	rs115312662	G	A	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr8	102233215	102233216	chr8:102233216:C:T	rs2061299	C	T	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr8	102332603	102332604	chr8:102332604:A:G	rs13278798	A	G	A	Sox2_MA0143.3	-1	0	+	0	0	.
chr8	102375446	102375447	chr8:102375447:A:G	rs73285234	A	G	A	Sox2_MA0143.3	12	0	-	0	0	.
chr8	102457218	102457219	chr8:102457219:T:G	rs74630609	T	G	T	Sox2_MA0143.3	20	0	-	0	0	.
chr8	102485236	102485237	chr8:102485237:C:G	rs111305721	C	G	G	Sox2_MA0143.3	10	0	-	0	0	.
chr8	102551155	102551156	chr8:102551156:C:T	rs919952	C	T	C	Sox2_MA0143.3	-5	0	-	0	0	.
chr8	102555195	102555196	chr8:102555196:G:A	rs2511706	G	A	G	Sox2_MA0143.3	8	0	+	0	0	.
chr8	102590501	102590502	chr8:102590502:G:T	rs753754099	G	T	G	Sox2_MA0143.3	-9	0	+	0	0	.
chr8	102599872	102599873	chr8:102599873:G:A	rs73698916	G	A	G	Sox2_MA0143.3	1	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr8	102797825	102797826	chr8:102797826:G:A	rs17775215	G	A	G	Sox2_MA0143.3	23	0	-	0	0	.
chr8	102940119	102940120	chr8:102940120:G:A	rs147389050	G	A	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr8	102960256	102960257	chr8:102960257:A:G	rs2460221	A	G	A	Sox2_MA0143.3	-9	0	-	0	0	.
chr8	103071557	103071558	chr8:103071558:G:T	rs16870033	G	T	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr8	103073636	103073637	chr8:103073637:G:T	rs2132864	G	T	G	Sox2_MA0143.3	24	0	-	0	0	.
chr8	103111077	103111078	chr8:103111078:G:A	rs33999374	G	A	A	Sox2_MA0143.3	10	0	-	0	0	.
chr8	103184056	103184057	chr8:103184057:G:C	rs72673319	G	C	G	Sox2_MA0143.3	-5	0	+	0	0	.
chr8	103267870	103267871	chr8:103267871:A:T	rs3133833	A	T	T	Sox2_MA0143.3	22	0	-	0	0	.
chr8	103305099	103305100	chr8:103305100:C:T	rs185878050	C	T	C	Sox2_MA0143.3	10	0	+	0	0	.
chr8	103345718	103345719	chr8:103345719:C:G	rs7834297	C	G	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr8	103372244	103372245	chr8:103372245:C:T	rs538511205	C	T	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr8	103396281	103396282	chr8:103396282:G:A	rs17228538	G	A	G	Sox2_MA0143.3	-14	0	+	0	0	.
chr8	103435853	103435854	chr8:103435854:G:A	chr8:103435854:G:A	G	A	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr8	103775944	103775945	chr8:103775945:G:C	rs1521063	G	C	G	Sox2_MA0143.3	27	0	+	0	0	.
chr8	103790762	103790763	chr8:103790763:A:C	rs72679498	A	C	A	Sox2_MA0143.3	23	0	+	0	0	.
chr8	103795962	103795963	chr8:103795963:C:T	rs79263410	C	T	C	Sox2_MA0143.3	10	0	+	0	0	.
chr8	103908055	103908056	chr8:103908056:C:G	rs113153218	C	G	G	Sox2_MA0143.3	10	0	+	0	0	.
chr8	103998721	103998722	chr8:103998722:C:G	rs13268881	C	G	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr8	104022131	104022132	chr8:104022132:A:C	rs10108895	A	C	A	Sox2_MA0143.3	23	0	-	0	0	.
chr8	104273101	104273102	chr8:104273102:G:A	rs74764881	G	A	G	Sox2_MA0143.3	-3	0	+	0	0	.
chr8	104322178	104322179	chr8:104322179:C:T	rs1533243	C	T	C	Sox2_MA0143.3	15	0	-	0	0	.
chr8	104347334	104347335	chr8:104347335:G:A	rs72667456	G	A	G	Sox2_MA0143.3	16	0	-	0	0	.
chr8	104347335	104347336	chr8:104347336:A:G	rs72667457	A	G	A	Sox2_MA0143.3	15	0	-	0	0	.
chr8	104361470	104361471	chr8:104361471:T:C	rs115341860	T	C	T	Sox2_MA0143.3	14	0	+	0	0	.
chr8	104362656	104362657	chr8:104362657:C:T	rs4734783	C	T	T	Sox2_MA0143.3	11	0	+	0	0	.
chr8	104440300	104440301	chr8:104440301:G:C	rs2853173	G	C	G	Sox2_MA0143.3	7	1	+	8.864090315184848	9.206767037375712	CCTTTGTG
chr8	104440301	104440302	chr8:104440302:C:T	rs2669437	C	T	C	Sox2_MA0143.3	8	0	+	0	0	.
chr8	104463608	104463609	chr8:104463609:T:C	rs113952187	T	C	T	Sox2_MA0143.3	20	0	-	0	0	.
chr8	104506751	104506752	chr8:104506752:C:T	rs2959031	C	T	C	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr8	104645093	104645094	chr8:104645094:G:A	rs11782865	G	A	A	Sox2_MA0143.3	9	0	+	0	0	.
chr8	104691708	104691709	chr8:104691709:C:A	rs3857892	C	A	C	Sox2_MA0143.3	19	0	+	0	0	.
chr8	104733694	104733695	chr8:104733695:C:T	rs62509201	C	T	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr8	104805508	104805509	chr8:104805509:G:C	rs72674173	G	C	G	Sox2_MA0143.3	18	0	-	0	0	.
chr8	104850487	104850488	chr8:104850488:C:T	rs72677041	C	T	C	Sox2_MA0143.3	5	1	-	9.613475778572903	2.7047209992576837	CCATTGTT
chr8	104871751	104871752	chr8:104871752:A:G	rs7004002	A	G	A	Sox2_MA0143.3	-9	0	-	0	0	.
chr8	105278349	105278350	chr8:105278350:T:C	rs12155641	T	C	T	Sox2_MA0143.3	26	0	+	0	0	.
chr8	105464030	105464031	chr8:105464031:G:A	rs117708370	G	A	G	Sox2_MA0143.3	23	0	+	0	0	.
chr8	105518586	105518587	chr8:105518587:A:G	rs113066108	A	G	A	Sox2_MA0143.3	21	0	+	0	0	.
chr8	105575911	105575912	chr8:105575912:T:C	rs13270854	T	C	T	Sox2_MA0143.3	-14	0	+	0	0	.
chr8	105674493	105674494	chr8:105674494:G:C	rs3779773	G	C	G	Sox2_MA0143.3	21	0	-	0	0	.
chr8	105848438	105848439	chr8:105848439:A:T	rs10112683	A	T	A	Sox2_MA0143.3	13	0	-	0	0	.
chr8	106012466	106012467	chr8:106012467:T:A	rs2029879	T	A	A	Sox2_MA0143.3	3	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr8	106012482	106012483	chr8:106012483:A:G	rs57848428	A	G	A	Sox2_MA0143.3	19	0	+	0	0	.
chr8	106014912	106014913	chr8:106014913:C:T	rs1496181	C	T	T	Sox2_MA0143.3	-13	0	-	0	0	.
chr8	106083249	106083250	chr8:106083250:C:T	rs540281293	C	T	C	Sox2_MA0143.3	14	0	-	0	0	.
chr8	106083250	106083251	chr8:106083251:G:A	rs17227218	G	A	G	Sox2_MA0143.3	13	0	-	0	0	.
chr8	106106269	106106270	chr8:106106270:G:T	rs1235824574	G	T	G	Sox2_MA0143.3	11	0	-	0	0	.
chr8	106435176	106435177	chr8:106435177:G:A	rs10102666	G	A	G	Sox2_MA0143.3	14	0	-	0	0	.
chr8	106477011	106477012	chr8:106477012:G:C	rs115022749	G	C	G	Sox2_MA0143.3	0	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr8	106507823	106507824	chr8:106507824:C:A	rs1670381	C	A	C	Sox2_MA0143.3	8	0	+	0	0	.
chr8	106578033	106578034	chr8:106578034:G:A	rs10112029	G	A	A	Sox2_MA0143.3	20	0	+	0	0	.
chr8	106622406	106622407	chr8:106622407:C:T	rs13277585	C	T	C	Sox2_MA0143.3	13	0	+	0	0	.
chr8	106794533	106794534	chr8:106794534:G:A	rs56336546	G	A	G	Sox2_MA0143.3	20	0	+	0	0	.
chr8	106831080	106831081	chr8:106831081:T:C	rs3018926	T	C	C	Sox2_MA0143.3	26	0	+	0	0	.
chr8	107069197	107069198	chr8:107069198:A:G	rs57157047	A	G	A	Sox2_MA0143.3	-4	0	-	0	0	.
chr8	107069203	107069204	chr8:107069204:T:C	rs2584386	T	C	T	Sox2_MA0143.3	-10	0	-	0	0	.
chr8	107127683	107127684	chr8:107127684:A:G	rs10955437	A	G	A	Sox2_MA0143.3	2	1	+	9.019595766176417	2.900948058900136	CCATTGTC
chr8	107155449	107155450	chr8:107155450:G:C	rs542134204	G	C	G	Sox2_MA0143.3	0	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr8	107163869	107163870	chr8:107163870:G:C	rs141438538	G	C	G	Sox2_MA0143.3	9	0	-	0	0	.
chr8	107374362	107374363	chr8:107374363:A:C	rs892247	A	C	A	Sox2_MA0143.3	-2	0	-	0	0	.
chr8	107456164	107456165	chr8:107456165:T:G	rs56340978	T	G	T	Sox2_MA0143.3	17	0	+	0	0	.
chr8	107562810	107562811	chr8:107562811:G:A	rs6993722	G	A	G	Sox2_MA0143.3	5	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr8	107675342	107675343	chr8:107675343:C:G	rs1494973	C	G	C	Sox2_MA0143.3	8	0	+	0	0	.
chr8	107675359	107675360	chr8:107675360:G:A	rs1494974	G	A	a	Sox2_MA0143.3	25	0	+	0	0	.
chr8	107741289	107741290	chr8:107741290:G:A	rs1003155322	G	A	G	Sox2_MA0143.3	12	0	+	0	0	.
chr8	107774832	107774833	chr8:107774833:T:C	rs1347654	T	C	G	Sox2_MA0143.3	23	0	+	0	0	.
chr8	107779101	107779102	chr8:107779102:G:C	rs140545259	G	C	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr8	107930528	107930529	chr8:107930529:A:G	rs489422	A	G	G	Sox2_MA0143.3	-2	0	+	0	0	.
chr8	107941874	107941875	chr8:107941875:G:A	rs76483651	G	A	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr8	107951710	107951711	chr8:107951711:T:C	rs79989662	T	C	T	Sox2_MA0143.3	-7	0	-	0	0	.
chr8	107987562	107987563	chr8:107987563:G:T	rs28481410	G	T	G	Sox2_MA0143.3	12	0	-	0	0	.
chr8	108010297	108010298	chr8:108010298:G:A	rs77960910	G	A	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr8	108080725	108080726	chr8:108080726:T:G	chr8:108080726:T:G	T	G	T	Sox2_MA0143.3	-12	0	-	0	0	.
chr8	108276137	108276138	chr8:108276138:G:A	rs11779483	G	A	G	Sox2_MA0143.3	17	0	-	0	0	.
chr8	108276169	108276170	chr8:108276170:G:T	rs6469168	G	T	T	Sox2_MA0143.3	-15	0	-	0	0	.
chr8	108355550	108355551	chr8:108355551:C:A	rs71524779	C	A	C	Sox2_MA0143.3	11	0	+	0	0	.
chr8	108695030	108695031	chr8:108695031:G:A	rs111690590	G	A	G	Sox2_MA0143.3	24	0	+	0	0	.
chr8	108722937	108722938	chr8:108722938:C:T	rs10100726	C	T	C	Sox2_MA0143.3	10	0	+	0	0	.
chr8	108918863	108918864	chr8:108918864:T:C	rs568499405	T	C	T	Sox2_MA0143.3	-20	0	-	0	0	.
chr8	109030181	109030182	chr8:109030182:C:T	rs140964960	C	T	C	Sox2_MA0143.3	26	0	-	0	0	.
chr8	109059052	109059053	chr8:109059053:C:G	rs4735084	C	G	C	Sox2_MA0143.3	9	0	-	0	0	.
chr8	109175010	109175011	chr8:109175011:G:A	rs4428648	G	A	G	Sox2_MA0143.3	20	0	-	0	0	.
chr8	109237533	109237534	chr8:109237534:T:C	rs2926217	T	C	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr8	109597051	109597052	chr8:109597052:A:G	rs2703376	A	G	G	Sox2_MA0143.3	2	1	+	9.019595766176417	2.900948058900136	CCATTGTC
chr8	110670475	110670476	chr8:110670476:C:A	rs6996014	C	A	A	Sox2_MA0143.3	13	0	+	0	0	.
chr8	110833205	110833206	chr8:110833206:C:A	rs1826046	C	A	C	Sox2_MA0143.3	19	0	+	0	0	.
chr8	111515248	111515249	chr8:111515249:T:A	rs2717178	T	A	T	Sox2_MA0143.3	6	1	+	8.676919043985553	1.7681642646703326	CCATTGTG
chr8	111529276	111529277	chr8:111529277:G:A	rs188054648	G	A	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr8	111529561	111529562	chr8:111529562:C:G	rs2195515	C	G	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr8	111669161	111669162	chr8:111669162:T:C	rs13259383	T	C	T	Sox2_MA0143.3	-5	0	+	0	0	.
chr8	112082741	112082742	chr8:112082742:T:C	rs769726774	T	C	T	Sox2_MA0143.3	11	0	-	0	0	.
chr8	112195025	112195026	chr8:112195026:C:G	rs183718608	C	G	C	Sox2_MA0143.3	22	0	+	0	0	.
chr8	112689901	112689902	chr8:112689902:A:G	rs16883953	A	G	A	Sox2_MA0143.3	19	0	-	0	0	.
chr8	112725185	112725186	chr8:112725186:C:T	rs67594301	C	T	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr8	112736405	112736406	chr8:112736406:A:G	rs13261301	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr8	113005247	113005248	chr8:113005248:C:A	rs1532799	C	A	A	Sox2_MA0143.3	11	0	-	0	0	.
chr8	113013765	113013766	chr8:113013766:A:G	rs1969112	A	G	G	Sox2_MA0143.3	13	0	+	0	0	.
chr8	113202169	113202170	chr8:113202170:C:T	rs1522065	C	T	.	Sox2_MA0143.3	5	1	-	8.676919043985553	1.7681642646703324	CCATTGTG
chr8	114075430	114075431	chr8:114075431:C:A	rs72679697	C	A	C	Sox2_MA0143.3	21	0	-	0	0	.
chr8	114362193	114362194	chr8:114362194:A:G	rs290599	A	G	G	Sox2_MA0143.3	20	0	-	0	0	.
chr8	114386749	114386750	chr8:114386750:A:G	rs290620	A	G	G	Sox2_MA0143.3	-12	0	+	0	0	.
chr8	114586217	114586218	chr8:114586218:G:A	rs940988314	G	A	-	Sox2_MA0143.3	-20	0	+	0	0	.
chr8	114586249	114586250	chr8:114586250:C:T	rs113058397	C	T	-	Sox2_MA0143.3	12	0	+	0	0	.
chr8	114707637	114707638	chr8:114707638:A:G	rs10113060	A	G	G	Sox2_MA0143.3	15	0	+	0	0	.
chr8	114740120	114740121	chr8:114740121:C:G	rs1158627	C	G	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr8	114958483	114958484	chr8:114958484:G:T	rs7839978	G	T	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr8	115218809	115218810	chr8:115218810:G:T	chr8:115218810:G:T	G	T	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr8	115257411	115257412	chr8:115257412:T:A	rs60661746	T	A	T	Sox2_MA0143.3	-13	0	-	0	0	.
chr8	115572929	115572930	chr8:115572930:C:T	rs2103481	C	T	C	Sox2_MA0143.3	23	0	-	0	0	.
chr8	115621189	115621190	chr8:115621190:G:A	rs6999068	G	A	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr8	115869118	115869119	chr8:115869119:C:T	rs7017576	C	T	C	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr8	115926729	115926730	chr8:115926730:G:C	rs7845935	G	C	G	Sox2_MA0143.3	27	0	+	0	0	.
chr8	116112618	116112619	chr8:116112619:C:T	rs191586331	C	T	C	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr8	116207062	116207063	chr8:116207063:C:T	rs55764402	C	T	C	Sox2_MA0143.3	24	0	+	0	0	.
chr8	116472060	116472061	chr8:116472061:G:A	rs751556924	G	A	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr8	116584200	116584201	chr8:116584201:C:T	chr8:116584201:C:T	C	T	C	Sox2_MA0143.3	24	0	-	0	0	.
chr8	116714914	116714915	chr8:116714915:T:C	rs16888683	T	C	T	Sox2_MA0143.3	-6	0	-	0	0	.
chr8	116806891	116806892	chr8:116806892:A:C	rs16888858	A	C	A	Sox2_MA0143.3	-12	0	-	0	0	.
chr8	116867414	116867415	chr8:116867415:G:A	rs7820245	G	A	G	Sox2_MA0143.3	1	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr8	116893803	116893804	chr8:116893804:T:C	rs2921769	T	C	C	Sox2_MA0143.3	11	0	-	0	0	.
chr8	116903674	116903675	chr8:116903675:A:G	rs1548063	A	G	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr8	116903775	116903776	chr8:116903776:G:A	rs720131	G	A	A	Sox2_MA0143.3	-11	0	+	0	0	.
chr8	116982016	116982017	chr8:116982017:A:G	rs7815163	A	G	A	Sox2_MA0143.3	-8	0	-	0	0	.
chr8	116995981	116995982	chr8:116995982:C:T	rs2938863	C	T	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr8	117098344	117098345	chr8:117098345:C:T	rs11991494	C	T	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr8	117231951	117231952	chr8:117231952:G:C	rs11989734	G	C	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr8	117383528	117383529	chr8:117383529:C:T	rs1793747	C	T	C	Sox2_MA0143.3	18	0	+	0	0	.
chr8	117602771	117602772	chr8:117602772:G:A	rs16889972	G	A	G	Sox2_MA0143.3	19	0	+	0	0	.
chr8	117616632	117616633	chr8:117616633:G:A	rs140791116	G	A	G	Sox2_MA0143.3	18	0	-	0	0	.
chr8	117834122	117834123	chr8:117834123:T:C	rs17439868	T	C	T	Sox2_MA0143.3	18	0	+	0	0	.
chr8	117850273	117850274	chr8:117850274:G:A	rs146026687	G	A	G	Sox2_MA0143.3	25	0	+	0	0	.
chr8	117862630	117862631	chr8:117862631:G:A	rs17430427	G	A	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr8	117862961	117862962	chr8:117862962:T:C	rs17503761	T	C	T	Sox2_MA0143.3	-5	0	-	0	0	.
chr8	117960748	117960749	chr8:117960749:G:A	rs11562774	G	A	G	Sox2_MA0143.3	12	0	-	0	0	.
chr8	117978744	117978745	chr8:117978745:A:G	rs4876782	A	G	G	Sox2_MA0143.3	6	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr8	118000338	118000339	chr8:118000339:G:A	rs17476282	G	A	G	Sox2_MA0143.3	7	1	-	9.206767037375712	9.800647049772198	CCTTTGTC
chr8	118008209	118008210	chr8:118008210:G:A	rs9297574	G	A	G	Sox2_MA0143.3	21	0	-	0	0	.
chr8	118100228	118100229	chr8:118100229:G:A	rs17506357	G	A	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr8	118154454	118154455	chr8:118154455:T:C	rs723268	T	C	C	Sox2_MA0143.3	19	0	+	0	0	.
chr8	118202914	118202915	chr8:118202915:T:C	rs2514951	T	C	C	Sox2_MA0143.3	19	0	-	0	0	.
chr8	118228401	118228402	chr8:118228402:C:T	rs17432583	C	T	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr8	118340038	118340039	chr8:118340039:C:A	rs2450203	C	A	A	Sox2_MA0143.3	1	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr8	118396371	118396372	chr8:118396372:G:C	rs147161411	G	C	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr8	118898840	118898841	chr8:118898841:A:G	rs142906364	A	G	A	Sox2_MA0143.3	2	1	+	9.613475778572903	3.494828071296623	CCATTGTT
chr8	119027481	119027482	chr8:119027482:T:C	rs10098408	T	C	T	Sox2_MA0143.3	20	0	+	0	0	.
chr8	119054134	119054135	chr8:119054135:A:G	rs78959153	A	G	G	Sox2_MA0143.3	19	0	-	0	0	.
chr8	119054165	119054166	chr8:119054166:T:C	chr8:119054166:T:C	T	C	T	Sox2_MA0143.3	-12	0	-	0	0	.
chr8	119126613	119126614	chr8:119126614:T:A	rs57938217	T	A	A	Sox2_MA0143.3	22	0	-	0	0	.
chr8	119175114	119175115	chr8:119175115:A:G	rs2468173	A	G	A	Sox2_MA0143.3	-15	0	-	0	0	.
chr8	119209250	119209251	chr8:119209251:A:G	rs1389498462	A	G	A	Sox2_MA0143.3	3	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr8	119363554	119363555	chr8:119363555:C:G	rs72684269	C	G	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr8	119502802	119502803	chr8:119502803:C:T	rs10107512	C	T	C	Sox2_MA0143.3	7	1	+	9.206767037375712	9.800647049772198	CCTTTGTC
chr8	119586719	119586720	chr8:119586720:C:T	rs16892826	C	T	C	Sox2_MA0143.3	11	0	-	0	0	.
chr8	119586728	119586729	chr8:119586729:T:C	rs913870564	T	C	T	Sox2_MA0143.3	2	1	-	9.613475778572903	3.494828071296623	CCATTGTT
chr8	119603419	119603420	chr8:119603420:G:A	rs1374101	G	A	G	Sox2_MA0143.3	24	0	-	0	0	.
chr8	119648614	119648615	chr8:119648615:C:A	rs78330703	C	A	C	Sox2_MA0143.3	10	0	-	0	0	.
chr8	119672673	119672674	chr8:119672674:G:A	rs10105110	G	A	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr8	119890245	119890246	chr8:119890246:C:T	rs10955940	C	T	c	Sox2_MA0143.3	-15	0	+	0	0	.
chr8	119965976	119965977	chr8:119965977:C:T	rs2102905	C	T	C	Sox2_MA0143.3	18	0	+	0	0	.
chr8	120013781	120013782	chr8:120013782:C:T	rs6469890	C	T	T	Sox2_MA0143.3	-8	0	+	0	0	.
chr8	120060699	120060700	chr8:120060700:G:T	rs10505376	G	T	G	Sox2_MA0143.3	0	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr8	120174183	120174184	chr8:120174184:G:A	rs12543951	G	A	G	Sox2_MA0143.3	9	0	+	0	0	.
chr8	120287544	120287545	chr8:120287545:G:A	rs573916041	G	A	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr8	120342266	120342267	chr8:120342267:G:A	rs3816523	G	A	A	Sox2_MA0143.3	27	0	-	0	0	.
chr8	120344508	120344509	chr8:120344509:A:G	rs73706448	A	G	A	Sox2_MA0143.3	11	0	-	0	0	.
chr8	120372449	120372450	chr8:120372450:A:G	rs192482950	A	G	A	Sox2_MA0143.3	4	1	-	8.864090315184848	1.9553355358696274	CCTTTGTG
chr8	120384277	120384278	chr8:120384278:T:A	rs4870729	T	A	A	Sox2_MA0143.3	-2	0	-	0	0	.
chr8	120605118	120605119	chr8:120605119:C:A	rs4338145	C	A	C	Sox2_MA0143.3	10	0	+	0	0	.
chr8	120964256	120964257	chr8:120964257:A:T	rs13262944	A	T	T	Sox2_MA0143.3	-16	0	+	0	0	.
chr8	120985981	120985982	chr8:120985982:G:A	rs1623074	G	A	A	Sox2_MA0143.3	-18	0	-	0	0	.
chr8	121007377	121007378	chr8:121007378:A:G	rs1714643	A	G	A	Sox2_MA0143.3	10	0	-	0	0	.
chr8	121014469	121014470	chr8:121014470:T:C	rs564478059	T	C	T	Sox2_MA0143.3	16	0	+	0	0	.
chr8	121154540	121154541	chr8:121154541:A:G	rs77006813	A	G	A	Sox2_MA0143.3	22	0	-	0	0	.
chr8	121291152	121291153	chr8:121291153:A:G	rs10112419	A	G	A	Sox2_MA0143.3	-18	0	-	0	0	.
chr8	121464439	121464440	chr8:121464440:T:C	rs1601698	T	C	T	Sox2_MA0143.3	10	0	-	0	0	.
chr8	121464464	121464465	chr8:121464465:G:A	rs1601699	G	A	A	Sox2_MA0143.3	-15	0	-	0	0	.
chr8	121558172	121558173	chr8:121558173:T:A	rs7016865	T	A	T	Sox2_MA0143.3	10	0	-	0	0	.
chr8	121708174	121708175	chr8:121708175:C:T	rs12548027	C	T	c	Sox2_MA0143.3	-5	0	+	0	0	.
chr8	121732628	121732629	chr8:121732629:C:T	rs28407976	C	T	C	Sox2_MA0143.3	1	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr8	121767115	121767116	chr8:121767116:C:G	rs58605087	C	G	C	Sox2_MA0143.3	22	0	+	0	0	.
chr8	121768803	121768804	chr8:121768804:C:A	rs16896010	C	A	C	Sox2_MA0143.3	10	0	+	0	0	.
chr8	121833773	121833774	chr8:121833774:T:C	rs61545094	T	C	T	Sox2_MA0143.3	6	1	+	8.864090315184848	1.9553355358696278	CCTTTGTG
chr8	121842504	121842505	chr8:121842505:C:T	rs77740667	C	T	C	Sox2_MA0143.3	0	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr8	121842505	121842506	chr8:121842506:C:T	rs75629678	C	T	C	Sox2_MA0143.3	1	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr8	122017715	122017716	chr8:122017716:T:C	rs73332786	T	C	T	Sox2_MA0143.3	-14	0	+	0	0	.
chr8	122017727	122017728	chr8:122017728:C:T	rs2136634	C	T	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr8	122079076	122079077	chr8:122079077:G:A	rs116144549	G	A	G	Sox2_MA0143.3	20	0	-	0	0	.
chr8	122334806	122334807	chr8:122334807:G:C	rs34811381	G	C	G	Sox2_MA0143.3	24	0	-	0	0	.
chr8	122568630	122568631	chr8:122568631:C:T	rs990829689	C	T	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr8	122657780	122657781	chr8:122657781:C:G	rs141975954	C	G	C	Sox2_MA0143.3	21	0	-	0	0	.
chr8	122677910	122677911	chr8:122677911:G:T	rs777313536	G	T	G	Sox2_MA0143.3	9	0	+	0	0	.
chr8	122680870	122680871	chr8:122680871:C:T	rs56953434	C	T	C	Sox2_MA0143.3	16	0	-	0	0	.
chr8	122686606	122686607	chr8:122686607:C:T	rs1390820333	C	T	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr8	122747562	122747563	chr8:122747563:T:C	rs7832769	T	C	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr8	122756836	122756837	chr8:122756837:T:C	rs4871302	T	C	T	Sox2_MA0143.3	2	1	-	9.613475778572903	3.494828071296623	CCATTGTT
chr8	122780355	122780356	chr8:122780356:C:A	rs554498537	C	A	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr8	122838347	122838348	chr8:122838348:T:G	rs58617677	T	G	T	Sox2_MA0143.3	25	0	+	0	0	.
chr8	122925908	122925909	chr8:122925909:A:G	rs7827368	A	G	G	Sox2_MA0143.3	14	0	+	0	0	.
chr8	122995517	122995518	chr8:122995518:C:G	rs77792261	C	G	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr8	123022510	123022511	chr8:123022511:T:C	rs889845518	T	C	T	Sox2_MA0143.3	-13	0	-	0	0	.
chr8	123029151	123029152	chr8:123029152:T:C	rs7824629	T	C	C	Sox2_MA0143.3	20	0	-	0	0	.
chr8	123037922	123037923	chr8:123037923:C:A	rs77335291	C	A	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr8	123083164	123083165	chr8:123083165:G:A	rs62520600	G	A	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr8	123085788	123085789	chr8:123085789:C:T	rs7836014	C	T	C	Sox2_MA0143.3	1	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr8	123182499	123182500	chr8:123182500:C:T	rs11988157	C	T	T	Sox2_MA0143.3	-16	0	-	0	0	.
chr8	123205382	123205383	chr8:123205383:G:A	rs73341736	G	A	G	Sox2_MA0143.3	17	0	+	0	0	.
chr8	123413178	123413179	chr8:123413179:A:G	rs374760596	A	G	A	Sox2_MA0143.3	-10	0	+	0	0	.
chr8	123427577	123427578	chr8:123427578:G:T	rs13269269	G	T	g	Sox2_MA0143.3	12	0	+	0	0	.
chr8	123456230	123456231	chr8:123456231:A:G	rs10216826	A	G	T	Sox2_MA0143.3	19	0	+	0	0	.
chr8	123573273	123573274	chr8:123573274:T:C	rs17338685	T	C	T	Sox2_MA0143.3	-1	0	+	0	0	.
chr8	123581403	123581404	chr8:123581404:T:C	chr8:123581404:T:C	T	C	T	Sox2_MA0143.3	15	0	+	0	0	.
chr8	123589294	123589295	chr8:123589295:G:A	rs12547541	G	A	G	Sox2_MA0143.3	26	0	+	0	0	.
chr8	123596413	123596414	chr8:123596414:C:G	rs13252512	C	G	C	Sox2_MA0143.3	24	0	-	0	0	.
chr8	123597972	123597973	chr8:123597973:T:C	rs13273000	T	C	T	Sox2_MA0143.3	12	0	+	0	0	.
chr8	123597987	123597988	chr8:123597988:C:T	rs59488911	C	T	c	Sox2_MA0143.3	27	0	+	0	0	.
chr8	123610854	123610855	chr8:123610855:G:A	rs4871395	G	A	A	Sox2_MA0143.3	-15	0	-	0	0	.
chr8	123614241	123614242	chr8:123614242:C:G	rs10956138	C	G	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr8	123615300	123615301	chr8:123615301:G:T	rs113115751	G	T	G	Sox2_MA0143.3	20	0	+	0	0	.
chr8	123615579	123615580	chr8:123615580:G:A	rs146173098	G	A	G	Sox2_MA0143.3	-11	0	+	0	0	.
chr8	123618111	123618112	chr8:123618112:T:C	rs7821932	T	C	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr8	123649863	123649864	chr8:123649864:C:T	rs10505439	C	T	T	Sox2_MA0143.3	0	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr8	123650531	123650532	chr8:123650532:A:G	rs4871405	A	G	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr8	123681203	123681204	chr8:123681204:C:T	rs3739283	C	T	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr8	123690529	123690530	chr8:123690530:T:C	rs7010432	T	C	T	Sox2_MA0143.3	26	0	-	0	0	.
chr8	123694176	123694177	chr8:123694177:T:C	rs554131296	T	C	T	Sox2_MA0143.3	3	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr8	123697267	123697268	chr8:123697268:C:T	rs59903084	C	T	C	Sox2_MA0143.3	-20	0	-	0	0	.
chr8	123714251	123714252	chr8:123714252:T:C	rs11992243	T	C	T	Sox2_MA0143.3	25	0	+	0	0	.
chr8	123716750	123716751	chr8:123716751:G:A	rs118085035	G	A	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr8	123720147	123720148	chr8:123720148:G:T	rs2010301	G	T	G	Sox2_MA0143.3	1	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr8	123839992	123839993	chr8:123839993:G:A	rs79158601	G	A	G	Sox2_MA0143.3	-11	0	+	0	0	.
chr8	123852282	123852283	chr8:123852283:T:G	rs1897319	T	G	G	Sox2_MA0143.3	19	0	-	0	0	.
chr8	123931507	123931508	chr8:123931508:C:A	rs4299983	C	A	A	Sox2_MA0143.3	-16	0	-	0	0	.
chr8	123936216	123936217	chr8:123936217:C:T	rs72709139	C	T	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr8	123936238	123936239	chr8:123936239:T:G	rs16899111	T	G	T	Sox2_MA0143.3	15	0	+	0	0	.
chr8	124104471	124104472	chr8:124104472:G:A	rs542410899	G	A	G	Sox2_MA0143.3	17	0	-	0	0	.
chr8	124126561	124126562	chr8:124126562:C:A	rs4434603	C	A	C	Sox2_MA0143.3	17	0	-	0	0	.
chr8	124201061	124201062	chr8:124201062:G:A	rs73703987	G	A	g	Sox2_MA0143.3	-11	0	+	0	0	.
chr8	124215514	124215515	chr8:124215515:C:A	rs62519192	C	A	C	Sox2_MA0143.3	0	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr8	124354801	124354802	chr8:124354802:T:C	rs6986235	T	C	T	Sox2_MA0143.3	-6	0	+	0	0	.
chr8	124394157	124394158	chr8:124394158:C:G	rs4394374	C	G	c	Sox2_MA0143.3	17	0	+	0	0	.
chr8	124431811	124431812	chr8:124431812:T:C	rs139104400	T	C	-	Sox2_MA0143.3	22	0	+	0	0	.
chr8	124559505	124559506	chr8:124559506:T:C	rs6470250	T	C	T	Sox2_MA0143.3	6	1	+	8.676919043985553	1.7681642646703326	CCATTGTG
chr8	124559991	124559992	chr8:124559992:G:A	rs17298884	G	A	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr8	124604734	124604735	chr8:124604735:G:C	rs16899848	G	C	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr8	124624939	124624940	chr8:124624940:T:C	rs4871519	T	C	C	Sox2_MA0143.3	27	0	+	0	0	.
chr8	124631768	124631769	chr8:124631769:T:C	chr8:124631769:T:C	T	C	T	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr8	124717961	124717962	chr8:124717962:G:A	rs4870920	G	A	G	Sox2_MA0143.3	26	0	-	0	0	.
chr8	124720615	124720616	chr8:124720616:T:C	rs6470263	T	C	C	Sox2_MA0143.3	4	1	+	3.5547341015215945	-3.3540206777936254	CCTTTGTA
chr8	124742426	124742427	chr8:124742427:G:A	rs11779371	G	A	A	Sox2_MA0143.3	-4	0	-	0	0	.
chr8	124743249	124743250	chr8:124743250:T:C	rs1367499	T	C	T	Sox2_MA0143.3	-18	0	+	0	0	.
chr8	124743252	124743253	chr8:124743253:C:G	rs1367498	C	G	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr8	124743286	124743287	chr8:124743287:G:T	rs713557	G	T	G	Sox2_MA0143.3	19	0	+	0	0	.
chr8	124757270	124757271	chr8:124757271:C:G	rs911824922	C	G	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr8	124830997	124830998	chr8:124830998:T:C	rs11783665	T	C	T	Sox2_MA0143.3	13	0	+	0	0	.
chr8	124857339	124857340	chr8:124857340:A:G	rs11774426	A	G	a	Sox2_MA0143.3	11	0	-	0	0	.
chr8	124889173	124889174	chr8:124889174:G:T	rs7386656	G	T	G	Sox2_MA0143.3	9	0	-	0	0	.
chr8	124906734	124906735	chr8:124906735:G:A	rs116971376	G	A	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr8	124957058	124957059	chr8:124957059:T:G	rs79056319	T	G	T	Sox2_MA0143.3	19	0	+	0	0	.
chr8	125066827	125066828	chr8:125066828:C:T	rs79004545	C	T	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr8	125066833	125066834	chr8:125066834:G:A	rs62529095	G	A	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr8	125131076	125131077	chr8:125131077:A:G	rs2891633	A	G	A	Sox2_MA0143.3	27	0	+	0	0	.
chr8	125189226	125189227	chr8:125189227:A:G	rs10100556	A	G	G	Sox2_MA0143.3	22	0	-	0	0	.
chr8	125193859	125193860	chr8:125193860:A:G	rs10098862	A	G	A	Sox2_MA0143.3	-8	0	+	0	0	.
chr8	125335597	125335598	chr8:125335598:G:A	rs145807634	G	A	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr8	125344424	125344425	chr8:125344425:A:G	rs77935838	A	G	A	Sox2_MA0143.3	-16	0	+	0	0	.
chr8	125397470	125397471	chr8:125397471:C:G	rs7826495	C	G	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr8	125412424	125412425	chr8:125412425:A:G	rs77197880	A	G	A	Sox2_MA0143.3	14	0	+	0	0	.
chr8	125429822	125429823	chr8:125429823:C:G	rs4871594	C	G	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr8	125445683	125445684	chr8:125445684:A:T	rs73344814	A	T	A	Sox2_MA0143.3	26	0	-	0	0	.
chr8	125484619	125484620	chr8:125484620:G:A	rs1033525097	G	A	G	Sox2_MA0143.3	23	0	-	0	0	.
chr8	125508942	125508943	chr8:125508943:C:A	rs188298002	C	A	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr8	125509564	125509565	chr8:125509565:G:A	rs11996862	G	A	G	Sox2_MA0143.3	0	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr8	125522372	125522373	chr8:125522373:G:A	rs7835068	G	A	G	Sox2_MA0143.3	10	0	+	0	0	.
chr8	125579654	125579655	chr8:125579655:C:G	rs565233848	C	G	C	Sox2_MA0143.3	1	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr8	125602124	125602125	chr8:125602125:C:T	rs10956253	C	T	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr8	125643025	125643026	chr8:125643026:A:C	rs141463456	A	C	A	Sox2_MA0143.3	-19	0	+	0	0	.
chr8	125643063	125643064	chr8:125643064:C:T	rs78211341	C	T	C	Sox2_MA0143.3	19	0	+	0	0	.
chr8	125644142	125644143	chr8:125644143:C:A	rs57125562	C	A	C	Sox2_MA0143.3	17	0	+	0	0	.
chr8	125656501	125656502	chr8:125656502:A:G	rs16900790	A	G	G	Sox2_MA0143.3	8	0	+	0	0	.
chr8	125697911	125697912	chr8:125697912:G:A	rs139912608	G	A	G	Sox2_MA0143.3	10	0	-	0	0	.
chr8	125697935	125697936	chr8:125697936:A:G	rs16900811	A	G	A	Sox2_MA0143.3	-14	0	-	0	0	.
chr8	125702823	125702824	chr8:125702824:C:A	rs72724669	C	A	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr8	125831554	125831555	chr8:125831555:C:T	rs56714659	C	T	C	Sox2_MA0143.3	16	0	-	0	0	.
chr8	125889216	125889217	chr8:125889217:T:C	rs62522819	T	C	T	Sox2_MA0143.3	3	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr8	126010819	126010820	chr8:126010820:C:T	rs10108513	C	T	C	Sox2_MA0143.3	18	0	-	0	0	.
chr8	126248915	126248916	chr8:126248916:G:A	rs4242373	G	A	A	Sox2_MA0143.3	7	1	-	9.206767037375712	9.800647049772198	CCTTTGTC
chr8	126433572	126433573	chr8:126433573:A:C	rs73331585	A	C	A	Sox2_MA0143.3	-18	0	+	0	0	.
chr8	126433598	126433599	chr8:126433599:A:G	rs2721093	A	G	A	Sox2_MA0143.3	8	0	+	0	0	.
chr8	126498053	126498054	chr8:126498054:T:C	rs77878866	T	C	C	Sox2_MA0143.3	13	0	-	0	0	.
chr8	126555132	126555133	chr8:126555133:C:T	rs146675216	C	T	C	Sox2_MA0143.3	24	0	-	0	0	.
chr8	126555624	126555625	chr8:126555625:A:G	rs75739669	A	G	A	Sox2_MA0143.3	15	0	-	0	0	.
chr8	126595979	126595980	chr8:126595980:A:T	rs4388422	A	T	A	Sox2_MA0143.3	-6	0	+	0	0	.
chr8	126683881	126683882	chr8:126683882:T:C	rs16901647	T	C	T	Sox2_MA0143.3	-9	0	-	0	0	.
chr8	126767474	126767475	chr8:126767475:A:G	rs6990693	A	G	G	Sox2_MA0143.3	11	0	+	0	0	.
chr8	126897115	126897116	chr8:126897116:T:C	rs9297746	T	C	T	Sox2_MA0143.3	-14	0	-	0	0	.
chr8	126964696	126964697	chr8:126964697:T:C	rs6994285	T	C	T	Sox2_MA0143.3	-18	0	+	0	0	.
chr8	126966767	126966768	chr8:126966768:A:G	rs118102449	A	G	A	Sox2_MA0143.3	10	0	-	0	0	.
chr8	126990556	126990557	chr8:126990557:G:C	rs12678076	G	C	G	Sox2_MA0143.3	10	0	+	0	0	.
chr8	127222837	127222838	chr8:127222838:C:A	rs35813501	C	A	A	Sox2_MA0143.3	18	0	+	0	0	.
chr8	127297799	127297800	chr8:127297800:G:T	rs533428259	G	T	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr8	127331206	127331207	chr8:127331207:G:T	rs7816567	G	T	G	Sox2_MA0143.3	24	0	+	0	0	.
chr8	127337481	127337482	chr8:127337482:A:G	rs13275275	A	G	G	Sox2_MA0143.3	-11	0	+	0	0	.
chr8	127371350	127371351	chr8:127371351:C:T	rs7815245	C	T	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr8	127472087	127472088	chr8:127472088:T:C	rs6470520	T	C	C	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr8	127478603	127478604	chr8:127478604:G:T	rs575832865	G	T	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr8	127509261	127509262	chr8:127509262:G:A	rs4871027	G	A	G	Sox2_MA0143.3	22	0	-	0	0	.
chr8	127513022	127513023	chr8:127513023:C:A	rs7017300	C	A	A	Sox2_MA0143.3	19	0	+	0	0	.
chr8	127570480	127570481	chr8:127570481:G:A	rs35966570	G	A	G	Sox2_MA0143.3	-11	0	+	0	0	.
chr8	127576952	127576953	chr8:127576953:C:G	rs7840738	C	G	C	Sox2_MA0143.3	5	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr8	127585258	127585259	chr8:127585259:T:A	rs6415496	T	A	T	Sox2_MA0143.3	2	1	+	9.206767037375712	9.019595766176417	CCTTTGTC
chr8	127596438	127596439	chr8:127596439:G:A	rs118104279	G	A	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr8	127630985	127630986	chr8:127630986:A:G	rs6989963	A	G	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr8	127669245	127669246	chr8:127669246:G:T	rs7845191	G	T	G	Sox2_MA0143.3	27	0	+	0	0	.
chr8	127732896	127732897	chr8:127732897:G:T	rs184427607	G	T	G	Sox2_MA0143.3	25	0	+	0	0	.
chr8	127744860	127744861	chr8:127744861:T:G	rs76402844	T	G	T	Sox2_MA0143.3	-2	0	+	0	0	.
chr8	127755440	127755441	chr8:127755441:G:C	rs7816979	G	C	G	Sox2_MA0143.3	22	0	+	0	0	.
chr8	127765313	127765314	chr8:127765314:C:G	rs115673054	C	G	C	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr8	127867592	127867593	chr8:127867593:G:A	rs4427136	G	A	A	Sox2_MA0143.3	-8	0	-	0	0	.
chr8	127877038	127877039	chr8:127877039:C:A	rs6470587	C	A	A	Sox2_MA0143.3	-6	0	-	0	0	.
chr8	127895860	127895861	chr8:127895861:C:G	rs74770771	C	G	C	Sox2_MA0143.3	1	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr8	127939229	127939230	chr8:127939230:G:A	rs890436	G	A	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr8	127981474	127981475	chr8:127981475:C:T	rs115311148	C	T	C	Sox2_MA0143.3	18	0	-	0	0	.
chr8	127990982	127990983	chr8:127990983:C:A	rs2076899	C	A	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr8	127994151	127994152	chr8:127994152:T:C	rs79246080	T	C	T	Sox2_MA0143.3	-4	0	+	0	0	.
chr8	127994180	127994181	chr8:127994181:C:T	rs117752675	C	T	C	Sox2_MA0143.3	25	0	+	0	0	.
chr8	127994716	127994717	chr8:127994717:C:T	rs7016045	C	T	T	Sox2_MA0143.3	12	0	-	0	0	.
chr8	128033719	128033720	chr8:128033720:A:T	rs182212638	A	T	A	Sox2_MA0143.3	7	1	-	9.613475778572903	3.3675628303222993	CCATTGTT
chr8	128053064	128053065	chr8:128053065:T:A	rs75855504	T	A	T	Sox2_MA0143.3	-14	0	-	0	0	.
chr8	128059290	128059291	chr8:128059291:A:G	rs2648873	A	G	G	Sox2_MA0143.3	2	1	+	9.613475778572903	3.494828071296623	CCATTGTT
chr8	128102116	128102117	chr8:128102117:G:A	rs56299026	G	A	G	Sox2_MA0143.3	26	0	+	0	0	.
chr8	128103468	128103469	chr8:128103469:G:A	rs1379698108	G	A	G	Sox2_MA0143.3	7	1	+	8.864090315184848	3.5547341015215945	CCTTTGTG
chr8	128109565	128109566	chr8:128109566:T:C	rs73707407	T	C	C	Sox2_MA0143.3	2	1	-	9.613475778572903	3.494828071296623	CCATTGTT
chr8	128133629	128133630	chr8:128133630:C:T	rs12676630	C	T	C	Sox2_MA0143.3	25	0	+	0	0	.
chr8	128176549	128176550	chr8:128176550:T:A	rs2936596	T	A	T	Sox2_MA0143.3	22	0	-	0	0	.
chr8	128263144	128263145	chr8:128263145:G:A	rs2893652	G	A	G	Sox2_MA0143.3	-3	0	+	0	0	.
chr8	128263467	128263468	chr8:128263468:A:G	rs79589099	A	G	A	Sox2_MA0143.3	21	0	+	0	0	.
chr8	128366356	128366357	chr8:128366357:A:G	rs11785859	A	G	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr8	128422808	128422809	chr8:128422809:C:T	rs7828703	C	T	C	Sox2_MA0143.3	10	0	-	0	0	.
chr8	128422809	128422810	chr8:128422810:G:A	rs1356329	G	A	G	Sox2_MA0143.3	9	0	-	0	0	.
chr8	128474144	128474145	chr8:128474145:C:T	rs17805310	C	T	C	Sox2_MA0143.3	23	0	-	0	0	.
chr8	128609345	128609346	chr8:128609346:T:A	rs6470642	T	A	T	Sox2_MA0143.3	21	0	+	0	0	.
chr8	128722449	128722450	chr8:128722450:C:T	rs9969486	C	T	C	Sox2_MA0143.3	21	0	+	0	0	.
chr8	128878012	128878013	chr8:128878013:A:G	rs779611477	A	G	A	Sox2_MA0143.3	20	0	+	0	0	.
chr8	128985936	128985937	chr8:128985937:A:G	rs34459708	A	G	A	Sox2_MA0143.3	-5	0	+	0	0	.
chr8	129024270	129024271	chr8:129024271:A:C	rs139418440	A	C	A	Sox2_MA0143.3	15	0	+	0	0	.
chr8	129162242	129162243	chr8:129162243:A:G	rs58943042	A	G	A	Sox2_MA0143.3	25	0	-	0	0	.
chr8	129264125	129264126	chr8:129264126:G:A	rs4461870	G	A	G	Sox2_MA0143.3	11	0	+	0	0	.
chr8	129314635	129314636	chr8:129314636:A:G	rs2568418	A	G	A	Sox2_MA0143.3	15	0	-	0	0	.
chr8	129356309	129356310	chr8:129356310:T:A	rs2568437	T	A	T	Sox2_MA0143.3	-3	0	-	0	0	.
chr8	129437074	129437075	chr8:129437075:G:A	rs6989293	G	A	A	Sox2_MA0143.3	-1	0	+	0	0	.
chr8	129449515	129449516	chr8:129449516:C:T	rs59577656	C	T	C	Sox2_MA0143.3	19	0	-	0	0	.
chr8	129475407	129475408	chr8:129475408:G:A	rs1108353	G	A	A	Sox2_MA0143.3	14	0	-	0	0	.
chr8	129487648	129487649	chr8:129487649:C:T	rs16904091	C	T	C	Sox2_MA0143.3	1	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr8	129546623	129546624	chr8:129546624:C:T	rs10505544	C	T	C	Sox2_MA0143.3	1	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr8	129546643	129546644	chr8:129546644:G:T	chr8:129546644:G:T	G	T	G	Sox2_MA0143.3	21	0	+	0	0	.
chr8	129559943	129559944	chr8:129559944:C:G	rs1433576	C	G	G	Sox2_MA0143.3	27	0	-	0	0	.
chr8	129633445	129633446	chr8:129633446:A:G	rs55705857	A	G	A	Sox2_MA0143.3	20	0	-	0	0	.
chr8	129633453	129633454	chr8:129633454:T:C	rs192089371	T	C	T	Sox2_MA0143.3	12	0	-	0	0	.
chr8	129658050	129658051	chr8:129658051:G:A	rs35509786	G	A	A	Sox2_MA0143.3	-15	0	+	0	0	.
chr8	129707624	129707625	chr8:129707625:T:A	rs10110525	T	A	A	Sox2_MA0143.3	-8	0	-	0	0	.
chr8	129818436	129818437	chr8:129818437:C:T	rs62525040	C	T	T	Sox2_MA0143.3	5	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr8	129823513	129823514	chr8:129823514:T:A	rs387526	T	A	T	Sox2_MA0143.3	11	0	-	0	0	.
chr8	129825349	129825350	chr8:129825350:G:A	rs863238	G	A	G	Sox2_MA0143.3	1	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr8	129835619	129835620	chr8:129835620:C:T	rs62525976	C	T	C	Sox2_MA0143.3	11	0	-	0	0	.
chr8	129887081	129887082	chr8:129887082:C:T	rs59839253	C	T	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr8	129887084	129887085	chr8:129887085:T:C	rs28520393	T	C	C	Sox2_MA0143.3	-12	0	-	0	0	.
chr8	130028506	130028507	chr8:130028507:C:T	rs56020982	C	T	C	Sox2_MA0143.3	22	0	+	0	0	.
chr8	130094847	130094848	chr8:130094848:T:C	rs16904203	T	C	T	Sox2_MA0143.3	-1	0	-	0	0	.
chr8	130121174	130121175	chr8:130121175:A:G	rs10099820	A	G	A	Sox2_MA0143.3	20	0	+	0	0	.
chr8	130317801	130317802	chr8:130317802:T:C	rs56060465	T	C	T	Sox2_MA0143.3	18	0	+	0	0	.
chr8	130329041	130329042	chr8:130329042:G:A	rs72724446	G	A	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr8	130410605	130410606	chr8:130410606:C:T	rs34019017	C	T	T	Sox2_MA0143.3	-9	0	+	0	0	.
chr8	130484984	130484985	chr8:130484985:A:C	rs7386203	A	C	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr8	130605021	130605022	chr8:130605022:C:T	rs567340540	C	T	C	Sox2_MA0143.3	9	0	+	0	0	.
chr8	130693752	130693753	chr8:130693753:T:A	rs4294201	T	A	T	Sox2_MA0143.3	2	1	-	9.019595766176417	9.206767037375712	CCATTGTC
chr8	130727509	130727510	chr8:130727510:C:T	rs556405823	C	T	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr8	131343234	131343235	chr8:131343235:T:C	rs7465333	T	C	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr8	131706031	131706032	chr8:131706032:C:G	rs532603	C	G	G	Sox2_MA0143.3	7	1	+	9.019595766176417	8.676919043985553	CCATTGTC
chr8	131952772	131952773	chr8:131952773:A:G	rs76319607	A	G	A	Sox2_MA0143.3	-11	0	+	0	0	.
chr8	132052298	132052299	chr8:132052299:C:A	rs7832539	C	A	A	Sox2_MA0143.3	22	0	+	0	0	.
chr8	132052301	132052302	chr8:132052302:G:A	rs11785677	G	A	G	Sox2_MA0143.3	25	0	+	0	0	.
chr8	132261518	132261519	chr8:132261519:G:T	rs142527315	G	T	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr8	132357892	132357893	chr8:132357893:C:T	rs1457789	C	T	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr8	132433530	132433531	chr8:132433531:T:C	rs7841732	T	C	C	Sox2_MA0143.3	14	0	+	0	0	.
chr8	132440554	132440555	chr8:132440555:C:A	rs16904685	C	A	C	Sox2_MA0143.3	11	0	+	0	0	.
chr8	132464558	132464559	chr8:132464559:T:C	rs2673555	T	C	T	Sox2_MA0143.3	4	1	+	3.5547341015215945	-3.3540206777936254	CCTTTGTA
chr8	132492233	132492234	chr8:132492234:G:C	rs3914483	G	C	G	Sox2_MA0143.3	9	0	-	0	0	.
chr8	132835444	132835445	chr8:132835445:C:G	rs10097664	C	G	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr8	132882256	132882257	chr8:132882257:C:T	rs180217	C	T	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr8	132892134	132892135	chr8:132892135:G:A	rs864898	G	A	G	Sox2_MA0143.3	1	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr8	132955640	132955641	chr8:132955641:G:C	rs885196	G	C	C	Sox2_MA0143.3	0	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr8	132984105	132984106	chr8:132984106:C:A	rs16904800	C	A	C	Sox2_MA0143.3	7	1	+	9.206767037375712	3.5547341015215945	CCTTTGTC
chr8	133053506	133053507	chr8:133053507:C:T	rs79595449	C	T	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr8	133059587	133059588	chr8:133059588:T:C	rs2741200	T	C	T	Sox2_MA0143.3	-15	0	+	0	0	.
chr8	133074557	133074558	chr8:133074558:A:G	rs2739155	A	G	G	Sox2_MA0143.3	-2	0	+	0	0	.
chr8	133094891	133094892	chr8:133094892:T:G	rs2256476	T	G	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr8	133101847	133101848	chr8:133101848:G:T	rs2979023	G	T	G	Sox2_MA0143.3	13	0	-	0	0	.
chr8	133112430	133112431	chr8:133112431:A:T	rs2979039	A	T	A	Sox2_MA0143.3	18	0	+	0	0	.
chr8	133112437	133112438	chr8:133112438:T:G	rs11774274	T	G	T	Sox2_MA0143.3	25	0	+	0	0	.
chr8	133223227	133223228	chr8:133223228:A:G	rs72731545	A	G	A	Sox2_MA0143.3	-12	0	+	0	0	.
chr8	133241807	133241808	chr8:133241808:A:G	rs2272646	A	G	G	Sox2_MA0143.3	11	0	-	0	0	.
chr8	133266736	133266737	chr8:133266737:C:G	rs3779932	C	G	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr8	133350589	133350590	chr8:133350590:G:A	rs2976592	G	A	A	Sox2_MA0143.3	1	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr8	133401625	133401626	chr8:133401626:T:C	rs1075580	T	C	C	Sox2_MA0143.3	11	0	-	0	0	.
chr8	133539042	133539043	chr8:133539043:A:G	rs10956709	A	G	A	Sox2_MA0143.3	-4	0	-	0	0	.
chr8	133557313	133557314	chr8:133557314:T:C	rs78996166	T	C	T	Sox2_MA0143.3	2	1	-	8.676919043985553	2.5582713367092715	CCATTGTG
chr8	133559664	133559665	chr8:133559665:C:G	rs7820233	C	G	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr8	133563449	133563450	chr8:133563450:G:T	rs117555140	G	T	G	Sox2_MA0143.3	23	0	+	0	0	.
chr8	133577788	133577789	chr8:133577789:C:A	rs72722103	C	A	C	Sox2_MA0143.3	7	1	-	8.676919043985553	9.613475778572903	CCATTGTG
chr8	133616468	133616469	chr8:133616469:A:G	rs7837732	A	G	A	Sox2_MA0143.3	-14	0	+	0	0	.
chr8	133616476	133616477	chr8:133616477:A:G	rs7837738	A	G	A	Sox2_MA0143.3	-6	0	+	0	0	.
chr8	133646171	133646172	chr8:133646172:A:T	rs2922481	A	T	T	Sox2_MA0143.3	27	0	-	0	0	.
chr8	133646218	133646219	chr8:133646219:G:A	rs756937196	G	A	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr8	133697350	133697351	chr8:133697351:T:C	rs13259134	T	C	C	Sox2_MA0143.3	21	0	+	0	0	.
chr8	133703020	133703021	chr8:133703021:G:A	rs2922487	G	A	A	Sox2_MA0143.3	-20	0	+	0	0	.
chr8	133703519	133703520	chr8:133703520:G:A	rs112834016	G	A	G	Sox2_MA0143.3	13	0	+	0	0	.
chr8	133771979	133771980	chr8:133771980:A:T	rs16904991	A	T	A	Sox2_MA0143.3	-1	0	-	0	0	.
chr8	133809385	133809386	chr8:133809386:C:A	rs3921642	C	A	C	Sox2_MA0143.3	14	0	+	0	0	.
chr8	133809389	133809390	chr8:133809390:C:T	chr8:133809390:C:T	C	T	C	Sox2_MA0143.3	18	0	+	0	0	.
chr8	133816329	133816330	chr8:133816330:G:A	rs35066368	G	A	G	Sox2_MA0143.3	20	0	-	0	0	.
chr8	133841787	133841788	chr8:133841788:A:G	rs7812695	A	G	A	Sox2_MA0143.3	6	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr8	133847846	133847847	chr8:133847847:A:G	rs11787470	A	G	A	Sox2_MA0143.3	23	0	-	0	0	.
chr8	133899244	133899245	chr8:133899245:C:T	rs4897730	C	T	T	Sox2_MA0143.3	-7	0	+	0	0	.
chr8	133899300	133899301	chr8:133899301:G:A	rs188962996	G	A	G	Sox2_MA0143.3	5	1	+	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr8	133944845	133944846	chr8:133944846:C:T	rs1317081	C	T	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr8	133976665	133976666	chr8:133976666:C:T	rs908724038	C	T	T	Sox2_MA0143.3	20	0	+	0	0	.
chr8	134109093	134109094	chr8:134109094:G:A	rs1457469	G	A	A	Sox2_MA0143.3	13	0	-	0	0	.
chr8	134185878	134185879	chr8:134185879:G:A	rs6471197	G	A	A	Sox2_MA0143.3	0	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr8	134261396	134261397	chr8:134261397:T:C	rs1838912	T	C	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr8	134334340	134334341	chr8:134334341:G:A	rs75582253	G	A	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr8	134463063	134463064	chr8:134463064:G:A	rs80071122	G	A	G	Sox2_MA0143.3	17	0	-	0	0	.
chr8	134483065	134483066	chr8:134483066:C:A	rs10100094	C	A	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr8	134484170	134484171	chr8:134484171:G:A	rs10101333	G	A	G	Sox2_MA0143.3	8	0	-	0	0	.
chr8	134574415	134574416	chr8:134574416:C:T	rs2241893	C	T	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr8	134574446	134574447	chr8:134574447:C:T	rs9987094	C	T	C	Sox2_MA0143.3	16	0	+	0	0	.
chr8	134605263	134605264	chr8:134605264:C:T	rs7001665	C	T	C	Sox2_MA0143.3	-5	0	-	0	0	.
chr8	134605268	134605269	chr8:134605269:A:G	rs7009036	A	G	A	Sox2_MA0143.3	-10	0	-	0	0	.
chr8	134695678	134695679	chr8:134695679:C:T	rs13282464	C	T	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr8	134753971	134753972	chr8:134753972:C:G	rs79183530	C	G	c	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr8	134757645	134757646	chr8:134757646:A:G	rs67047054	A	G	a	Sox2_MA0143.3	6	1	-	9.019595766176417	2.110840986861197	CCATTGTC
chr8	134757669	134757670	chr8:134757670:G:A	rs111593990	G	A	g	Sox2_MA0143.3	-18	0	-	0	0	.
chr8	134766059	134766060	chr8:134766060:A:C	rs12681725	A	C	a	Sox2_MA0143.3	24	0	+	0	0	.
chr8	134893406	134893407	chr8:134893407:T:A	rs187141033	T	A	T	Sox2_MA0143.3	8	0	+	0	0	.
chr8	134902000	134902001	chr8:134902001:C:G	rs12675950	C	G	C	Sox2_MA0143.3	-20	0	-	0	0	.
chr8	134928790	134928791	chr8:134928791:G:A	rs7014658	G	A	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr8	134928924	134928925	chr8:134928925:G:A	rs7014837	G	A	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr8	134949582	134949583	chr8:134949583:A:G	rs7016799	A	G	G	Sox2_MA0143.3	7	1	-	9.800647049772198	9.206767037375712	CCTTTGTT
chr8	135026643	135026644	chr8:135026644:T:C	rs150842853	T	C	T	Sox2_MA0143.3	3	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr8	135040693	135040694	chr8:135040694:A:C	rs62522596	A	C	C	Sox2_MA0143.3	4	1	-	9.206767037375712	2.2980122580604916	CCTTTGTC
chr8	135055047	135055048	chr8:135055048:T:C	rs563822220	T	C	T	Sox2_MA0143.3	7	1	+	9.800647049772198	9.206767037375712	CCTTTGTT
chr8	135228730	135228731	chr8:135228731:G:C	rs10097066	G	C	G	Sox2_MA0143.3	-3	0	+	0	0	.
chr8	135235628	135235629	chr8:135235629:G:A	rs115203420	G	A	G	Sox2_MA0143.3	1	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr8	135235749	135235750	chr8:135235750:C:T	rs1035995253	C	T	C	Sox2_MA0143.3	5	1	-	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr8	135294594	135294595	chr8:135294595:T:C	rs9324595	T	C	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr8	135324433	135324434	chr8:135324434:G:A	rs2977878	G	A	G	Sox2_MA0143.3	7	1	-	9.206767037375712	9.800647049772198	CCTTTGTC
chr8	135449371	135449372	chr8:135449372:C:T	rs4909484	C	T	T	Sox2_MA0143.3	-7	0	-	0	0	.
chr8	135462794	135462795	chr8:135462795:G:A	rs12679393	G	A	G	Sox2_MA0143.3	-2	0	+	0	0	.
chr8	135500438	135500439	chr8:135500439:G:C	rs16905381	G	C	G	Sox2_MA0143.3	-3	0	-	0	0	.
chr8	135526034	135526035	chr8:135526035:T:C	rs7832892	T	C	T	Sox2_MA0143.3	14	0	+	0	0	.
chr8	135526045	135526046	chr8:135526046:A:T	rs7829399	A	T	A	Sox2_MA0143.3	25	0	+	0	0	.
chr8	135674222	135674223	chr8:135674223:A:G	rs7839810	A	G	A	Sox2_MA0143.3	15	0	+	0	0	.
chr8	135674452	135674453	chr8:135674453:G:A	rs143439426	G	A	G	Sox2_MA0143.3	12	0	+	0	0	.
chr8	135674453	135674454	chr8:135674454:G:C	rs7824879	G	C	G	Sox2_MA0143.3	13	0	+	0	0	.
chr8	135721291	135721292	chr8:135721292:A:G	rs9657429	A	G	A	Sox2_MA0143.3	-6	0	-	0	0	.
chr8	135727593	135727594	chr8:135727594:C:G	rs56189243	C	G	C	Sox2_MA0143.3	7	1	+	9.019595766176417	8.676919043985553	CCATTGTC
chr8	135773327	135773328	chr8:135773328:C:T	rs79078798	C	T	C	Sox2_MA0143.3	-5	0	-	0	0	.
chr8	135793661	135793662	chr8:135793662:G:C	rs4388481	G	C	C	Sox2_MA0143.3	23	0	-	0	0	.
chr8	135890511	135890512	chr8:135890512:C:T	rs13276788	C	T	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr8	135894900	135894901	chr8:135894901:A:G	rs2873488	A	G	G	Sox2_MA0143.3	-16	0	-	0	0	.
chr8	136009976	136009977	chr8:136009977:A:C	rs11775156	A	C	A	Sox2_MA0143.3	-10	0	+	0	0	.
chr8	136029162	136029163	chr8:136029163:A:G	rs1159345	A	G	A	Sox2_MA0143.3	6	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr8	136040980	136040981	chr8:136040981:G:A	rs2317349	G	A	G	Sox2_MA0143.3	26	0	+	0	0	.
chr8	136348972	136348973	chr8:136348973:T:G	rs77006983	T	G	T	Sox2_MA0143.3	-15	0	-	0	0	.
chr8	136556008	136556009	chr8:136556009:T:C	rs305256	T	C	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr8	136556033	136556034	chr8:136556034:G:A	rs1837695	G	A	A	Sox2_MA0143.3	9	0	+	0	0	.
chr8	136794530	136794531	chr8:136794531:G:T	rs2613837	G	T	G	Sox2_MA0143.3	5	1	+	9.019595766176417	2.110840986861197	CCATTGTC
chr8	136906437	136906438	chr8:136906438:A:C	rs62524696	A	C	a	Sox2_MA0143.3	-18	0	+	0	0	.
chr8	136924585	136924586	chr8:136924586:A:C	rs2088636	A	C	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr8	136937537	136937538	chr8:136937538:A:G	rs1499446	A	G	A	Sox2_MA0143.3	14	0	+	0	0	.
chr8	137178395	137178396	chr8:137178396:A:G	rs79659277	A	G	A	Sox2_MA0143.3	21	0	+	0	0	.
chr8	137217728	137217729	chr8:137217729:C:T	rs12676359	C	T	T	Sox2_MA0143.3	-7	0	-	0	0	.
chr8	137219424	137219425	chr8:137219425:T:C	rs112738399	T	C	T	Sox2_MA0143.3	13	0	-	0	0	.
chr8	137219547	137219548	chr8:137219548:T:C	rs17668646	T	C	T	Sox2_MA0143.3	2	1	-	9.613475778572903	3.494828071296623	CCATTGTT
chr8	137333615	137333616	chr8:137333616:T:C	rs67992951	T	C	T	Sox2_MA0143.3	6	1	+	9.613475778572903	2.7047209992576837	CCATTGTT
chr8	137503516	137503517	chr8:137503517:T:A	rs34801694	T	A	A	Sox2_MA0143.3	12	0	-	0	0	.
chr8	137581805	137581806	chr8:137581806:A:G	rs34563440	A	G	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr8	137618449	137618450	chr8:137618450:G:C	rs67404905	G	C	-	Sox2_MA0143.3	-3	0	+	0	0	.
chr8	137703000	137703001	chr8:137703001:A:G	rs4469496	A	G	G	Sox2_MA0143.3	-14	0	+	0	0	.
chr8	137723565	137723566	chr8:137723566:A:T	rs11785646	A	T	A	Sox2_MA0143.3	18	0	-	0	0	.
chr8	137723704	137723705	chr8:137723705:C:T	rs11166751	C	T	C	Sox2_MA0143.3	8	0	-	0	0	.
chr8	137757608	137757609	chr8:137757609:C:T	rs11785971	C	T	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr8	137837229	137837230	chr8:137837230:T:G	rs13282624	T	G	G	Sox2_MA0143.3	18	0	+	0	0	.
chr8	138081317	138081318	chr8:138081318:A:G	rs56329203	A	G	A	Sox2_MA0143.3	6	1	-	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr8	138174211	138174212	chr8:138174212:T:C	rs4909743	T	C	C	Sox2_MA0143.3	4	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr8	138189851	138189852	chr8:138189852:C:A	rs4579575	C	A	A	Sox2_MA0143.3	27	0	+	0	0	.
chr8	138192410	138192411	chr8:138192411:T:A	rs3095	T	A	A	Sox2_MA0143.3	14	0	+	0	0	.
chr8	138369961	138369962	chr8:138369962:C:A	rs340710	C	A	C	Sox2_MA0143.3	5	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr8	138402236	138402237	chr8:138402237:C:T	rs2139329	C	T	T	Sox2_MA0143.3	14	0	-	0	0	.
chr8	138402243	138402244	chr8:138402244:C:T	rs2139330	C	T	C	Sox2_MA0143.3	7	1	-	8.864090315184848	3.5547341015215945	CCTTTGTG
chr8	138494864	138494865	chr8:138494865:A:G	rs4909800	A	G	G	Sox2_MA0143.3	2	1	+	8.676919043985553	2.5582713367092715	CCATTGTG
chr8	138601936	138601937	chr8:138601937:G:A	rs79902151	G	A	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr8	138657467	138657468	chr8:138657468:G:A	rs12547337	G	A	G	Sox2_MA0143.3	16	0	-	0	0	.
chr8	138660358	138660359	chr8:138660359:T:C	rs4072506	T	C	C	Sox2_MA0143.3	22	0	+	0	0	.
chr8	138732423	138732424	chr8:138732424:A:T	rs75122952	A	T	A	Sox2_MA0143.3	27	0	-	0	0	.
chr8	138773448	138773449	chr8:138773449:G:T	rs55954621	G	T	g	Sox2_MA0143.3	-20	0	+	0	0	.
chr8	138909750	138909751	chr8:138909751:A:G	rs6577964	A	G	a	Sox2_MA0143.3	10	0	-	0	0	.
chr8	138928480	138928481	chr8:138928481:G:T	rs11782780	G	T	T	Sox2_MA0143.3	15	0	+	0	0	.
chr8	138952347	138952348	chr8:138952348:G:C	rs6577975	G	C	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr8	139020941	139020942	chr8:139020942:A:G	rs1911124	A	G	G	Sox2_MA0143.3	25	0	+	0	0	.
chr8	139134884	139134885	chr8:139134885:T:C	rs11992144	T	C	T	Sox2_MA0143.3	-6	0	+	0	0	.
chr8	139226162	139226163	chr8:139226163:G:C	rs13273728	G	C	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr8	139335940	139335941	chr8:139335941:A:G	rs144462811	A	G	A	Sox2_MA0143.3	14	0	-	0	0	.
chr8	139493273	139493274	chr8:139493274:T:C	rs7018214	T	C	t	Sox2_MA0143.3	-7	0	+	0	0	.
chr8	139493299	139493300	chr8:139493300:T:C	rs7846499	T	C	T	Sox2_MA0143.3	19	0	+	0	0	.
chr8	139510456	139510457	chr8:139510457:C:T	rs115554327	C	T	C	Sox2_MA0143.3	12	0	-	0	0	.
chr8	139537490	139537491	chr8:139537491:A:G	rs12334324	A	G	A	Sox2_MA0143.3	18	0	-	0	0	.
chr8	139590010	139590011	chr8:139590011:T:G	rs2542437	T	G	T	Sox2_MA0143.3	-7	0	-	0	0	.
chr8	139592609	139592610	chr8:139592610:G:C	rs1968212	G	C	C	Sox2_MA0143.3	24	0	+	0	0	.
chr8	139647008	139647009	chr8:139647009:G:T	rs2615382	G	T	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr8	139675030	139675031	chr8:139675031:A:G	rs7846299	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr8	139681952	139681953	chr8:139681953:G:A	rs2111577	G	A	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr8	139736773	139736774	chr8:139736774:A:C	rs7821038	A	C	A	Sox2_MA0143.3	-17	0	+	0	0	.
chr8	139770203	139770204	chr8:139770204:C:T	rs11781877	C	T	C	Sox2_MA0143.3	23	0	-	0	0	.
chr8	139775342	139775343	chr8:139775343:C:T	rs529024995	C	T	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr8	139905331	139905332	chr8:139905332:C:T	rs7825905	C	T	T	Sox2_MA0143.3	-18	0	+	0	0	.
chr8	139957810	139957811	chr8:139957811:A:C	rs2665948	A	C	C	Sox2_MA0143.3	23	0	-	0	0	.
chr8	139960336	139960337	chr8:139960337:T:C	rs7817647	T	C	T	Sox2_MA0143.3	-6	0	-	0	0	.
chr8	139967857	139967858	chr8:139967858:G:C	rs116443492	G	C	G	Sox2_MA0143.3	-3	0	-	0	0	.
chr8	139970825	139970826	chr8:139970826:A:G	rs148847175	A	G	A	Sox2_MA0143.3	23	0	+	0	0	.
chr8	139976523	139976524	chr8:139976524:T:C	rs2319589	T	C	T	Sox2_MA0143.3	-6	0	-	0	0	.
chr8	140006063	140006064	chr8:140006064:T:C	rs72685226	T	C	T	Sox2_MA0143.3	27	0	-	0	0	.
chr8	140008803	140008804	chr8:140008804:A:C	rs12549400	A	C	A	Sox2_MA0143.3	-7	0	-	0	0	.
chr8	140047887	140047888	chr8:140047888:C:T	rs535881694	C	T	C	Sox2_MA0143.3	18	0	-	0	0	.
chr8	140051743	140051744	chr8:140051744:C:T	rs73725378	C	T	C	Sox2_MA0143.3	14	0	-	0	0	.
chr8	140061536	140061537	chr8:140061537:G:A	rs80174241	G	A	A	Sox2_MA0143.3	23	0	-	0	0	.
chr8	140061556	140061557	chr8:140061557:A:G	rs11994788	A	G	A	Sox2_MA0143.3	3	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr8	140128481	140128482	chr8:140128482:G:A	rs145169797	G	A	G	Sox2_MA0143.3	9	0	-	0	0	.
chr8	140176079	140176080	chr8:140176080:C:T	rs72687254	C	T	C	Sox2_MA0143.3	-12	0	-	0	0	.
chr8	140263695	140263696	chr8:140263696:C:T	rs34856302	C	T	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr8	140263701	140263702	chr8:140263702:T:A	rs12681682	T	A	T	Sox2_MA0143.3	-14	0	-	0	0	.
chr8	140264660	140264661	chr8:140264661:C:G	rs7835903	C	G	G	Sox2_MA0143.3	20	0	-	0	0	.
chr8	140296706	140296707	chr8:140296707:A:G	rs28692647	A	G	A	Sox2_MA0143.3	3	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr8	140453976	140453977	chr8:140453977:C:G	rs2977456	C	G	G	Sox2_MA0143.3	5	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr8	140465858	140465859	chr8:140465859:A:G	rs118019228	A	G	A	Sox2_MA0143.3	-15	0	-	0	0	.
chr8	140511906	140511907	chr8:140511907:C:T	rs529773033	C	T	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr8	140511926	140511927	chr8:140511927:T:C	rs994047625	T	C	T	Sox2_MA0143.3	11	0	+	0	0	.
chr8	140540647	140540648	chr8:140540648:T:C	rs77615474	T	C	T	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr8	140634451	140634452	chr8:140634452:A:C	rs547586144	A	C	A	Sox2_MA0143.3	2	1	-	9.206767037375712	2.900948058900136	CCTTTGTC
chr8	140644348	140644349	chr8:140644349:G:A	rs375401864	G	A	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr8	140709399	140709400	chr8:140709400:C:T	rs12550681	C	T	C	Sox2_MA0143.3	-5	0	-	0	0	.
chr8	140857416	140857417	chr8:140857417:T:A	rs13253993	T	A	T	Sox2_MA0143.3	8	0	+	0	0	.
chr8	140929876	140929877	chr8:140929877:G:A	rs75788959	G	A	G	Sox2_MA0143.3	13	0	-	0	0	.
chr8	140996098	140996099	chr8:140996099:C:G	rs10106406	C	G	C	Sox2_MA0143.3	5	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr8	141015729	141015730	chr8:141015730:C:T	rs62523587	C	T	C	Sox2_MA0143.3	18	0	+	0	0	.
chr8	141021936	141021937	chr8:141021937:G:A	rs180799938	G	A	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr8	141038671	141038672	chr8:141038672:A:T	rs150270325	A	T	A	Sox2_MA0143.3	-5	0	+	0	0	.
chr8	141045964	141045965	chr8:141045965:G:A	rs75953704	G	A	G	Sox2_MA0143.3	26	0	+	0	0	.
chr8	141070130	141070131	chr8:141070131:A:T	rs35710702	A	T	A	Sox2_MA0143.3	2	1	-	8.864090315184848	8.676919043985553	CCTTTGTG
chr8	141085198	141085199	chr8:141085199:C:T	rs61109514	C	T	C	Sox2_MA0143.3	5	1	-	9.019595766176417	2.110840986861197	CCATTGTC
chr8	141128145	141128146	chr8:141128146:C:A	rs185946834	C	A	C	Sox2_MA0143.3	14	0	+	0	0	.
chr8	141191377	141191378	chr8:141191378:T:C	rs13270024	T	C	T	Sox2_MA0143.3	-14	0	+	0	0	.
chr8	141245431	141245432	chr8:141245432:A:G	rs28521629	A	G	A	Sox2_MA0143.3	15	0	-	0	0	.
chr8	141259774	141259775	chr8:141259775:A:G	rs11167042	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr8	141332582	141332583	chr8:141332583:T:G	rs11984988	T	G	T	Sox2_MA0143.3	17	0	-	0	0	.
chr8	141417775	141417776	chr8:141417776:C:T	rs143354433	C	T	c	Sox2_MA0143.3	1	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr8	141417784	141417785	chr8:141417785:C:T	rs544057673	C	T	c	Sox2_MA0143.3	10	0	+	0	0	.
chr8	141448931	141448932	chr8:141448932:C:T	rs11167062	C	T	C	Sox2_MA0143.3	1	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr8	141448954	141448955	chr8:141448955:C:T	rs11986561	C	T	C	Sox2_MA0143.3	24	0	+	0	0	.
chr8	141460505	141460506	chr8:141460506:T:C	rs7459567	T	C	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr8	141467651	141467652	chr8:141467652:T:C	rs11775650	T	C	C	Sox2_MA0143.3	17	0	+	0	0	.
chr8	141504852	141504853	chr8:141504853:T:C	rs10102870	T	C	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr8	141507265	141507266	chr8:141507266:C:T	rs192216293	C	T	C	Sox2_MA0143.3	14	0	-	0	0	.
chr8	141636004	141636005	chr8:141636005:C:T	rs10088132	C	T	C	Sox2_MA0143.3	25	0	-	0	0	.
chr8	141732246	141732247	chr8:141732247:G:T	rs538305117	G	T	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr8	141739364	141739365	chr8:141739365:G:A	rs775417723	G	A	g	Sox2_MA0143.3	-4	0	-	0	0	.
chr8	141759156	141759157	chr8:141759157:G:A	rs534753184	G	A	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr8	141764410	141764411	chr8:141764411:C:G	rs12543576	C	G	T	Sox2_MA0143.3	16	0	+	0	0	.
chr8	141772966	141772967	chr8:141772967:A:G	rs9721191	A	G	G	Sox2_MA0143.3	24	0	+	0	0	.
chr8	141780916	141780917	chr8:141780917:G:A	rs67659622	G	A	G	Sox2_MA0143.3	-5	0	+	0	0	.
chr8	141800106	141800107	chr8:141800107:A:G	rs7387227	A	G	A	Sox2_MA0143.3	6	1	-	9.019595766176417	2.110840986861197	CCATTGTC
chr8	141926016	141926017	chr8:141926017:T:G	rs10111135	T	G	T	Sox2_MA0143.3	-7	0	+	0	0	.
chr8	142030086	142030087	chr8:142030087:G:A	rs118162204	G	A	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr8	142030097	142030098	chr8:142030098:G:A	rs7845947	G	A	G	Sox2_MA0143.3	-2	0	+	0	0	.
chr8	142048084	142048085	chr8:142048085:A:G	rs750520	A	G	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr8	142070130	142070131	chr8:142070131:G:A	rs113919038	G	A	G	Sox2_MA0143.3	12	0	+	0	0	.
chr8	142073392	142073393	chr8:142073393:C:T	rs11775269	C	T	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr8	142073393	142073394	chr8:142073394:G:T	rs116672195	G	T	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr8	142108641	142108642	chr8:142108642:A:G	rs902829	A	G	a	Sox2_MA0143.3	22	0	-	0	0	.
chr8	142108675	142108676	chr8:142108676:G:A	rs9969429	G	A	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr8	142109187	142109188	chr8:142109188:A:G	rs6583582	A	G	G	Sox2_MA0143.3	-2	0	+	0	0	.
chr8	142144234	142144235	chr8:142144235:G:A	chr8:142144235:G:A	G	A	G	Sox2_MA0143.3	5	1	+	9.019595766176417	2.110840986861197	CCATTGTC
chr8	142144234	142144235	chr8:142144235:G:C	rs13280419	G	C	G	Sox2_MA0143.3	5	1	+	9.019595766176417	2.110840986861197	CCATTGTC
chr8	142144238	142144239	chr8:142144239:C:A	rs13282544	C	A	A	Sox2_MA0143.3	9	0	+	0	0	.
chr8	142146992	142146993	chr8:142146993:A:G	rs3934930	A	G	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr8	142170822	142170823	chr8:142170823:T:C	rs11776418	T	C	C	Sox2_MA0143.3	4	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr8	142193351	142193352	chr8:142193352:A:G	rs115744445	A	G	A	Sox2_MA0143.3	8	0	+	0	0	.
chr8	142306888	142306889	chr8:142306889:C:T	rs4581170	C	T	T	Sox2_MA0143.3	7	1	-	8.864090315184848	3.5547341015215945	CCTTTGTG
chr8	142527822	142527823	chr8:142527823:G:A	rs4977036	G	A	G	Sox2_MA0143.3	5	1	+	8.676919043985553	1.7681642646703324	CCATTGTG
chr8	142547596	142547597	chr8:142547597:C:T	rs7387708	C	T	C	Sox2_MA0143.3	7	1	-	8.676919043985553	3.3675628303222993	CCATTGTG
chr8	142584533	142584534	chr8:142584534:G:A	rs12114356	G	A	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr8	142588986	142588987	chr8:142588987:C:A	rs35198054	C	A	C	Sox2_MA0143.3	21	0	-	0	0	.
chr8	142589013	142589014	chr8:142589014:G:C	rs35388004	G	C	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr8	142594453	142594454	chr8:142594454:T:C	rs73375876	T	C	C	Sox2_MA0143.3	26	0	+	0	0	.
chr8	142610272	142610273	chr8:142610273:A:G	rs60275617	A	G	A	Sox2_MA0143.3	-2	0	-	0	0	.
chr8	142626773	142626774	chr8:142626774:A:G	rs73716485	A	G	A	Sox2_MA0143.3	-13	0	-	0	0	.
chr8	142683872	142683873	chr8:142683873:G:A	rs587625861	G	A	G	Sox2_MA0143.3	16	0	+	0	0	.
chr8	142709881	142709882	chr8:142709882:T:C	rs2717552	T	C	t	Sox2_MA0143.3	-20	0	-	0	0	.
chr8	142727882	142727883	chr8:142727883:C:T	rs587706532	C	T	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr8	142727883	142727884	chr8:142727884:C:T	rs189222455	C	T	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr8	142739726	142739727	chr8:142739727:A:G	rs372437164	A	G	A	Sox2_MA0143.3	27	0	+	0	0	.
chr8	142773078	142773079	chr8:142773079:T:C	rs3808494	T	C	T	Sox2_MA0143.3	26	0	-	0	0	.
chr8	142773120	142773121	chr8:142773121:G:A	rs117661765	G	A	G	Sox2_MA0143.3	-16	0	-	0	0	.
chr8	142832995	142832996	chr8:142832996:G:A	rs113508633	G	A	g	Sox2_MA0143.3	5	1	+	9.206767037375712	2.298012258060492	CCTTTGTC
chr8	142949059	142949060	chr8:142949060:T:G	rs144550239	T	G	g	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr8	142963480	142963481	chr8:142963481:T:C	rs9771788	T	C	T	Sox2_MA0143.3	-7	0	-	0	0	.
chr8	143048418	143048419	chr8:143048419:G:A	chr8:143048419:G:A	G	A	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr8	143178771	143178772	chr8:143178772:C:T	rs56208924	C	T	C	Sox2_MA0143.3	21	0	+	0	0	.
chr8	143182187	143182188	chr8:143182188:C:A	rs72614044	C	A	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr8	143446542	143446543	chr8:143446543:T:G	rs1352299551	T	G	T	Sox2_MA0143.3	23	0	-	0	0	.
chr8	143482648	143482649	chr8:143482649:G:A	rs432027	G	A	G	Sox2_MA0143.3	8	0	-	0	0	.
chr8	143563788	143563789	chr8:143563789:A:G	rs59629369	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr8	143583591	143583592	chr8:143583592:G:A	rs4874157	G	A	G	Sox2_MA0143.3	9	0	-	0	0	.
chr8	143597802	143597803	chr8:143597803:G:C	rs943167090	G	C	G	Sox2_MA0143.3	1	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr8	143608477	143608478	chr8:143608478:G:C	rs34892354	G	C	G	Sox2_MA0143.3	13	0	-	0	0	.
chr8	143608501	143608502	chr8:143608502:G:A	rs189930517	G	A	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr8	143614704	143614705	chr8:143614705:C:T	rs375535808	C	T	G	Sox2_MA0143.3	18	0	+	0	0	.
chr8	143632913	143632914	chr8:143632914:T:C	chr8:143632914:T:C	T	C	T	Sox2_MA0143.3	4	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr8	143640584	143640585	chr8:143640585:C:T	rs4372013	C	T	C	Sox2_MA0143.3	27	0	+	0	0	.
chr8	143695071	143695072	chr8:143695072:T:C	rs3204170	T	C	T	Sox2_MA0143.3	12	0	+	0	0	.
chr8	143851097	143851098	chr8:143851098:A:G	rs781899383	A	G	.	Sox2_MA0143.3	-4	0	+	0	0	.
chr8	143940759	143940760	chr8:143940760:A:G	rs58223851	A	G	.	Sox2_MA0143.3	18	0	-	0	0	.
chr8	143957306	143957307	chr8:143957307:G:A	rs115067279	G	A	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr8	144012707	144012708	chr8:144012708:T:C	rs60050811	T	C	c	Sox2_MA0143.3	19	0	-	0	0	.
chr8	144056625	144056626	chr8:144056626:A:G	rs11993554	A	G	G	Sox2_MA0143.3	4	1	-	8.864090315184848	1.9553355358696274	CCTTTGTG
chr8	144085568	144085569	chr8:144085569:A:G	rs1127096	A	G	G	Sox2_MA0143.3	10	0	+	0	0	.
chr8	144116773	144116774	chr8:144116774:C:A	rs7829844	C	A	A	Sox2_MA0143.3	21	0	-	0	0	.
chr8	144189706	144189707	chr8:144189707:C:T	rs139244008	C	T	c	Sox2_MA0143.3	-7	0	+	0	0	.
chr8	144189707	144189708	chr8:144189708:G:A	rs552144370	G	A	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr8	144315851	144315852	chr8:144315852:A:G	rs145568026	A	G	A	Sox2_MA0143.3	-4	0	+	0	0	.
chr8	144337812	144337813	chr8:144337813:C:G	rs940068977	C	G	C	Sox2_MA0143.3	9	0	-	0	0	.
chr8	144337848	144337849	chr8:144337849:T:A	chr8:144337849:T:A	T	A	T	Sox2_MA0143.3	-16	0	+	0	0	.
chr8	144359844	144359845	chr8:144359845:C:A	rs117500243	C	A	C	Sox2_MA0143.3	0	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr8	144541176	144541177	chr8:144541177:C:T	rs139602402	C	T	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr8	144575043	144575044	chr8:144575044:C:T	rs113859476	C	T	C	Sox2_MA0143.3	16	0	-	0	0	.
chr8	144575048	144575049	chr8:144575049:G:A	rs112331774	G	A	G	Sox2_MA0143.3	11	0	-	0	0	.
chr8	144597828	144597829	chr8:144597829:T:C	rs138160636	T	C	t	Sox2_MA0143.3	10	0	-	0	0	.
chr8	144675598	144675599	chr8:144675599:T:C	rs2956185	T	C	C	Sox2_MA0143.3	4	1	+	8.864090315184848	1.9553355358696274	CCTTTGTG
chr8	144762404	144762405	chr8:144762405:C:G	rs2958485	C	G	G	Sox2_MA0143.3	1	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr8	144819900	144819901	chr8:144819901:G:A	chr8:144819901:G:A	G	A	G	Sox2_MA0143.3	24	0	+	0	0	.
chr8	144848628	144848629	chr8:144848629:T:C	rs116812888	T	C	T	Sox2_MA0143.3	-4	0	+	0	0	.
chr8	144853599	144853600	chr8:144853600:G:T	rs555517166	G	T	G	Sox2_MA0143.3	20	0	-	0	0	.
chr8	144853604	144853605	chr8:144853605:C:T	rs62531529	C	T	C	Sox2_MA0143.3	15	0	-	0	0	.
chr8	144939331	144939332	chr8:144939332:A:G	rs13248950	A	G	G	Sox2_MA0143.3	16	0	+	0	0	.
chr8	145001974	145001975	chr8:145001975:A:G	rs73716319	A	G	A	Sox2_MA0143.3	15	0	+	0	0	.
chr8	145001977	145001978	chr8:145001978:G:A	rs80005821	G	A	G	Sox2_MA0143.3	18	0	+	0	0	.
chr8	145025336	145025337	chr8:145025337:T:G	rs28859044	T	G	-	Sox2_MA0143.3	22	0	+	0	0	.
chr8	145029742	145029743	chr8:145029743:T:C	rs13279170	T	C	t	Sox2_MA0143.3	-18	0	-	0	0	.
chr8	145038305	145038306	chr8:145038306:A:C	rs13270958	A	C	c	Sox2_MA0143.3	-18	0	-	0	0	.
chr9	259883	259884	chr9:259884:G:C	rs552524	G	C	C	Sox2_MA0143.3	27	0	-	0	0	.
chr9	259989	259990	chr9:259990:G:C	rs553489	G	C	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr9	275178	275179	chr9:275179:G:A	rs12343204	G	A	A	Sox2_MA0143.3	-4	0	+	0	0	.
chr9	278106	278107	chr9:278107:A:G	rs12352476	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr9	325018	325019	chr9:325019:G:C	rs10970392	G	C	G	Sox2_MA0143.3	-5	0	+	0	0	.
chr9	352943	352944	chr9:352944:C:G	rs7048884	C	G	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr9	371172	371173	chr9:371173:G:T	rs10972741	G	T	-	Sox2_MA0143.3	18	0	+	0	0	.
chr9	407410	407411	chr9:407411:G:A	rs7037092	G	A	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr9	534257	534258	chr9:534258:G:C	rs7031554	G	C	C	Sox2_MA0143.3	11	0	-	0	0	.
chr9	549671	549672	chr9:549672:C:T	rs62531493	C	T	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr9	550621	550622	chr9:550622:A:G	rs149872193	A	G	A	Sox2_MA0143.3	-6	0	+	0	0	.
chr9	592888	592889	chr9:592889:A:G	rs10491598	A	G	A	Sox2_MA0143.3	12	0	+	0	0	.
chr9	639920	639921	chr9:639921:A:G	rs10815404	A	G	A	Sox2_MA0143.3	16	0	+	0	0	.
chr9	653654	653655	chr9:653655:G:A	rs7863869	G	A	A	Sox2_MA0143.3	-6	0	+	0	0	.
chr9	682815	682816	chr9:682816:A:T	rs12379640	A	T	A	Sox2_MA0143.3	14	0	-	0	0	.
chr9	750180	750181	chr9:750181:C:T	rs113868580	C	T	C	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr9	751166	751167	chr9:751167:T:C	rs4740880	T	C	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr9	751195	751196	chr9:751196:G:A	rs72693501	G	A	A	Sox2_MA0143.3	16	0	+	0	0	.
chr9	800772	800773	chr9:800773:T:C	rs10976668	T	C	T	Sox2_MA0143.3	22	0	-	0	0	.
chr9	800781	800782	chr9:800782:C:A	rs16924123	C	A	C	Sox2_MA0143.3	13	0	-	0	0	.
chr9	804165	804166	chr9:804166:G:T	rs4742417	G	T	G	Sox2_MA0143.3	-8	0	+	0	0	.
chr9	804190	804191	chr9:804191:A:G	rs4742418	A	G	A	Sox2_MA0143.3	17	0	+	0	0	.
chr9	806486	806487	chr9:806487:C:G	rs66700494	C	G	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr9	820441	820442	chr9:820442:G:A	rs10976777	G	A	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr9	847291	847292	chr9:847292:G:T	rs1407808	G	T	T	Sox2_MA0143.3	17	0	-	0	0	.
chr9	930598	930599	chr9:930599:A:G	rs10977587	A	G	A	Sox2_MA0143.3	22	0	+	0	0	.
chr9	968053	968054	chr9:968054:A:G	rs35846503	A	G	A	Sox2_MA0143.3	11	0	-	0	0	.
chr9	1171649	1171650	chr9:1171650:C:T	rs1415619	C	T	C	Sox2_MA0143.3	0	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr9	1213480	1213481	chr9:1213481:C:G	rs10960451	C	G	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr9	1232341	1232342	chr9:1232342:G:C	rs775094521	G	C	G	Sox2_MA0143.3	25	0	-	0	0	.
chr9	1353712	1353713	chr9:1353713:C:T	rs10809948	C	T	T	Sox2_MA0143.3	-4	0	-	0	0	.
chr9	1463903	1463904	chr9:1463904:C:T	rs1339488	C	T	T	Sox2_MA0143.3	12	0	+	0	0	.
chr9	1582850	1582851	chr9:1582851:A:G	rs6474960	A	G	G	Sox2_MA0143.3	6	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr9	1603778	1603779	chr9:1603779:A:C	rs77411718	A	C	A	Sox2_MA0143.3	10	0	+	0	0	.
chr9	1978370	1978371	chr9:1978371:G:C	rs17725057	G	C	G	Sox2_MA0143.3	24	0	-	0	0	.
chr9	2134561	2134562	chr9:2134562:A:G	rs7019331	A	G	G	Sox2_MA0143.3	8	0	-	0	0	.
chr9	2163665	2163666	chr9:2163666:T:A	rs571735627	T	A	T	Sox2_MA0143.3	24	0	+	0	0	.
chr9	2181172	2181173	chr9:2181173:T:C	rs7847337	T	C	T	Sox2_MA0143.3	-18	0	-	0	0	.
chr9	2182061	2182062	chr9:2182062:A:G	rs2281786	A	G	A	Sox2_MA0143.3	-8	0	-	0	0	.
chr9	2182436	2182437	chr9:2182437:T:C	rs36186623	T	C	T	Sox2_MA0143.3	15	0	+	0	0	.
chr9	2200677	2200678	chr9:2200678:T:G	rs2376229	T	G	T	Sox2_MA0143.3	22	0	+	0	0	.
chr9	2228404	2228405	chr9:2228405:G:C	rs10965286	G	C	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr9	2229312	2229313	chr9:2229313:G:C	rs12344786	G	C	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr9	2229334	2229335	chr9:2229335:T:G	rs2093835	T	G	T	Sox2_MA0143.3	16	0	+	0	0	.
chr9	2276400	2276401	chr9:2276401:A:G	rs10965415	A	G	A	Sox2_MA0143.3	-12	0	-	0	0	.
chr9	2285281	2285282	chr9:2285282:A:T	rs4740669	A	T	A	Sox2_MA0143.3	18	0	-	0	0	.
chr9	2338935	2338936	chr9:2338936:C:A	rs7018661	C	A	C	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr9	2356358	2356359	chr9:2356359:C:G	rs4741684	C	G	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr9	2419581	2419582	chr9:2419582:G:A	rs872040	G	A	G	Sox2_MA0143.3	5	1	+	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr9	2470057	2470058	chr9:2470058:G:A	rs4741713	G	A	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr9	2487150	2487151	chr9:2487151:C:T	rs74456856	C	T	C	Sox2_MA0143.3	8	0	-	0	0	.
chr9	2509817	2509818	chr9:2509818:T:C	rs61184740	T	C	T	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr9	2569654	2569655	chr9:2569655:A:G	rs10738726	A	G	A	Sox2_MA0143.3	9	0	-	0	0	.
chr9	2574962	2574963	chr9:2574963:A:G	rs17488771	A	G	A	Sox2_MA0143.3	-3	0	-	0	0	.
chr9	2622594	2622595	chr9:2622595:G:C	rs148739035	G	C	G	Sox2_MA0143.3	15	0	-	0	0	.
chr9	2624185	2624186	chr9:2624186:A:G	rs7022122	A	G	A	Sox2_MA0143.3	24	0	-	0	0	.
chr9	2850498	2850499	chr9:2850499:T:C	rs73642105	T	C	T	Sox2_MA0143.3	-16	0	+	0	0	.
chr9	2850506	2850507	chr9:2850507:T:C	rs10120832	T	C	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr9	2942967	2942968	chr9:2942968:T:C	rs10757839	T	C	T	Sox2_MA0143.3	-12	0	-	0	0	.
chr9	2949579	2949580	chr9:2949580:G:T	rs17799828	G	T	G	Sox2_MA0143.3	9	0	+	0	0	.
chr9	3007493	3007494	chr9:3007494:T:G	chr9:3007494:T:G	T	G	T	Sox2_MA0143.3	-12	0	-	0	0	.
chr9	3046720	3046721	chr9:3046721:C:A	rs3904468	C	A	C	Sox2_MA0143.3	12	0	+	0	0	.
chr9	3046732	3046733	chr9:3046733:A:T	rs3843575	A	T	t	Sox2_MA0143.3	24	0	+	0	0	.
chr9	3124228	3124229	chr9:3124229:G:A	rs517893	G	A	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr9	3198676	3198677	chr9:3198677:C:T	rs12003184	C	T	C	Sox2_MA0143.3	13	0	+	0	0	.
chr9	3200828	3200829	chr9:3200829:C:A	rs10813664	C	A	A	Sox2_MA0143.3	11	0	+	0	0	.
chr9	3200829	3200830	chr9:3200830:A:G	rs10970598	A	G	A	Sox2_MA0143.3	12	0	+	0	0	.
chr9	3585820	3585821	chr9:3585821:G:C	rs144458939	G	C	G	Sox2_MA0143.3	22	0	-	0	0	.
chr9	3659364	3659365	chr9:3659365:T:A	rs35900255	T	A	T	Sox2_MA0143.3	-2	0	+	0	0	.
chr9	3659581	3659582	chr9:3659582:C:G	rs182437109	C	G	C	Sox2_MA0143.3	24	0	-	0	0	.
chr9	3674653	3674654	chr9:3674654:T:C	rs116163951	T	C	T	Sox2_MA0143.3	-17	0	-	0	0	.
chr9	3787438	3787439	chr9:3787439:A:G	rs10973543	A	G	A	Sox2_MA0143.3	-13	0	+	0	0	.
chr9	3827119	3827120	chr9:3827120:A:C	rs1331260	A	C	A	Sox2_MA0143.3	-15	0	-	0	0	.
chr9	3900856	3900857	chr9:3900857:G:A	rs61744686	G	A	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr9	3900981	3900982	chr9:3900982:T:C	rs10974067	T	C	T	Sox2_MA0143.3	-13	0	+	0	0	.
chr9	3909038	3909039	chr9:3909039:C:T	rs12685989	C	T	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr9	3909071	3909072	chr9:3909072:A:T	rs1471006	A	T	A	Sox2_MA0143.3	15	0	+	0	0	.
chr9	3969023	3969024	chr9:3969024:A:G	rs722046	A	G	A	Sox2_MA0143.3	14	0	+	0	0	.
chr9	4020628	4020629	chr9:4020629:T:G	rs16920396	T	G	T	Sox2_MA0143.3	4	1	+	9.800647049772198	2.8918922704569785	CCTTTGTT
chr9	4020632	4020633	chr9:4020633:C:T	rs112792608	C	T	C	Sox2_MA0143.3	8	0	+	0	0	.
chr9	4069812	4069813	chr9:4069813:A:G	rs2027393	A	G	G	Sox2_MA0143.3	2	1	+	8.676919043985553	2.5582713367092715	CCATTGTG
chr9	4077900	4077901	chr9:4077901:T:C	rs1340246	T	C	T	Sox2_MA0143.3	-16	0	+	0	0	.
chr9	4077930	4077931	chr9:4077931:T:G	rs76881814	T	G	T	Sox2_MA0143.3	14	0	+	0	0	.
chr9	4105397	4105398	chr9:4105398:T:C	rs149023968	T	C	T	Sox2_MA0143.3	18	0	-	0	0	.
chr9	4141355	4141356	chr9:4141356:G:C	rs67648867	G	C	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr9	4162452	4162453	chr9:4162453:A:G	rs10814855	A	G	A	Sox2_MA0143.3	24	0	-	0	0	.
chr9	4212346	4212347	chr9:4212347:A:G	rs7030479	A	G	A	Sox2_MA0143.3	3	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr9	4217810	4217811	chr9:4217811:C:T	rs911487	C	T	T	Sox2_MA0143.3	9	0	-	0	0	.
chr9	4236085	4236086	chr9:4236086:C:T	rs557559321	C	T	C	Sox2_MA0143.3	20	0	+	0	0	.
chr9	4316019	4316020	chr9:4316020:A:T	rs12339512	A	T	T	Sox2_MA0143.3	23	0	-	0	0	.
chr9	4362166	4362167	chr9:4362167:C:A	rs4284081	C	A	A	Sox2_MA0143.3	9	0	+	0	0	.
chr9	4362468	4362469	chr9:4362469:G:A	rs148578047	G	A	G	Sox2_MA0143.3	22	0	+	0	0	.
chr9	4371216	4371217	chr9:4371217:C:T	rs958319246	C	T	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr9	4397921	4397922	chr9:4397922:T:A	rs10814957	T	A	A	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr9	4426568	4426569	chr9:4426569:T:C	rs80010682	T	C	T	Sox2_MA0143.3	-13	0	+	0	0	.
chr9	4426593	4426594	chr9:4426594:C:G	rs74469019	C	G	C	Sox2_MA0143.3	12	0	+	0	0	.
chr9	4435539	4435540	chr9:4435540:T:G	chr9:4435540:T:G	T	G	T	Sox2_MA0143.3	-12	0	-	0	0	.
chr9	4588634	4588635	chr9:4588635:G:A	rs159916	G	A	G	Sox2_MA0143.3	-9	0	+	0	0	.
chr9	4591085	4591086	chr9:4591086:C:T	rs79266513	C	T	C	Sox2_MA0143.3	10	0	+	0	0	.
chr9	4601546	4601547	chr9:4601547:T:A	rs12351583	T	A	T	Sox2_MA0143.3	10	0	-	0	0	.
chr9	4636989	4636990	chr9:4636990:G:A	rs4740797	G	A	G	Sox2_MA0143.3	21	0	+	0	0	.
chr9	4640262	4640263	chr9:4640263:C:T	rs28485105	C	T	C	Sox2_MA0143.3	10	0	+	0	0	.
chr9	4681172	4681173	chr9:4681173:G:C	rs10974729	G	C	G	Sox2_MA0143.3	24	0	+	0	0	.
chr9	4755288	4755289	chr9:4755289:A:G	rs776923821	A	G	A	Sox2_MA0143.3	16	0	+	0	0	.
chr9	4770650	4770651	chr9:4770651:G:C	rs408138	G	C	G	Sox2_MA0143.3	-2	0	+	0	0	.
chr9	4844506	4844507	chr9:4844507:G:T	rs295259	G	T	G	Sox2_MA0143.3	-3	0	+	0	0	.
chr9	4864236	4864237	chr9:4864237:C:T	rs12552790	C	T	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr9	4939568	4939569	chr9:4939569:C:T	rs1327489	C	T	T	Sox2_MA0143.3	22	0	+	0	0	.
chr9	4988047	4988048	chr9:4988048:G:C	rs10156618	G	C	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr9	4988070	4988071	chr9:4988071:G:A	rs145837327	G	A	G	Sox2_MA0143.3	7	1	+	8.676919043985553	3.3675628303222993	CCATTGTG
chr9	5053742	5053743	chr9:5053743:C:T	rs2149555	C	T	A	Sox2_MA0143.3	-20	0	+	0	0	.
chr9	5388133	5388134	chr9:5388134:T:C	rs77216026	T	C	t	Sox2_MA0143.3	25	0	-	0	0	.
chr9	5388139	5388140	chr9:5388140:T:C	rs143071786	T	C	t	Sox2_MA0143.3	19	0	-	0	0	.
chr9	5509906	5509907	chr9:5509907:A:T	rs549318824	A	T	A	Sox2_MA0143.3	27	0	-	0	0	.
chr9	5828434	5828435	chr9:5828435:A:C	rs7023069	A	C	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr9	5909151	5909152	chr9:5909152:T:G	rs1056796	T	G	T	Sox2_MA0143.3	11	0	-	0	0	.
chr9	6040281	6040282	chr9:6040282:C:A	rs11506678	C	A	C	Sox2_MA0143.3	20	0	+	0	0	.
chr9	6224976	6224977	chr9:6224977:T:C	rs10815378	T	C	T	Sox2_MA0143.3	-17	0	+	0	0	.
chr9	6368102	6368103	chr9:6368103:T:C	rs1322171	T	C	T	Sox2_MA0143.3	3	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr9	6413455	6413456	chr9:6413456:A:T	rs748952874	A	T	A	Sox2_MA0143.3	8	0	-	0	0	.
chr9	6552819	6552820	chr9:6552820:T:C	rs181883817	T	C	T	Sox2_MA0143.3	-12	0	-	0	0	.
chr9	6643333	6643334	chr9:6643334:A:G	rs4742234	A	G	A	Sox2_MA0143.3	-12	0	-	0	0	.
chr9	6696458	6696459	chr9:6696459:T:C	rs820512	T	C	T	Sox2_MA0143.3	12	0	-	0	0	.
chr9	6703322	6703323	chr9:6703323:C:T	rs111753714	C	T	T	Sox2_MA0143.3	10	0	-	0	0	.
chr9	6716957	6716958	chr9:6716958:G:A	rs820519	G	A	a	Sox2_MA0143.3	19	0	-	0	0	.
chr9	6723832	6723833	chr9:6723833:G:A	rs2990660	G	A	g	Sox2_MA0143.3	14	0	+	0	0	.
chr9	6757292	6757293	chr9:6757293:T:C	rs77412238	T	C	T	Sox2_MA0143.3	-9	0	+	0	0	.
chr9	6757328	6757329	chr9:6757329:C:T	rs114880739	C	T	C	Sox2_MA0143.3	27	0	+	0	0	.
chr9	6785227	6785228	chr9:6785228:C:A	rs11792731	C	A	C	Sox2_MA0143.3	15	0	+	0	0	.
chr9	6785234	6785235	chr9:6785235:T:G	rs11795163	T	G	T	Sox2_MA0143.3	22	0	+	0	0	.
chr9	6796433	6796434	chr9:6796434:C:G	rs17509074	C	G	C	Sox2_MA0143.3	1	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr9	6908005	6908006	chr9:6908006:A:G	rs114805782	A	G	A	Sox2_MA0143.3	-4	0	+	0	0	.
chr9	6955387	6955388	chr9:6955388:C:G	rs868043391	C	G	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr9	6960106	6960107	chr9:6960107:A:C	rs7022642	A	C	C	Sox2_MA0143.3	12	0	-	0	0	.
chr9	6960116	6960117	chr9:6960117:T:C	rs61336896	T	C	T	Sox2_MA0143.3	2	1	-	8.676919043985553	2.5582713367092715	CCATTGTG
chr9	6968660	6968661	chr9:6968661:A:G	rs73397826	A	G	A	Sox2_MA0143.3	-17	0	+	0	0	.
chr9	6986463	6986464	chr9:6986464:G:C	rs35826653	G	C	G	Sox2_MA0143.3	10	0	+	0	0	.
chr9	7150807	7150808	chr9:7150808:A:G	rs577541069	A	G	A	Sox2_MA0143.3	7	1	+	3.5547341015215945	8.864090315184848	CCTTTGTA
chr9	7171948	7171949	chr9:7171949:G:A	rs7855802	G	A	A	Sox2_MA0143.3	-6	0	-	0	0	.
chr9	7304497	7304498	chr9:7304498:G:T	rs10815588	G	T	G	Sox2_MA0143.3	18	0	+	0	0	.
chr9	7317382	7317383	chr9:7317383:C:T	rs13288409	C	T	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr9	7321801	7321802	chr9:7321802:T:C	rs10976237	T	C	T	Sox2_MA0143.3	21	0	+	0	0	.
chr9	7360620	7360621	chr9:7360621:C:T	rs72691156	C	T	C	Sox2_MA0143.3	17	0	-	0	0	.
chr9	7399174	7399175	chr9:7399175:G:A	rs943174	G	A	A	Sox2_MA0143.3	18	0	-	0	0	.
chr9	7406525	7406526	chr9:7406526:C:G	rs11793437	C	G	C	Sox2_MA0143.3	27	0	+	0	0	.
chr9	7439635	7439636	chr9:7439636:T:C	rs4742350	T	C	C	Sox2_MA0143.3	9	0	+	0	0	.
chr9	7520254	7520255	chr9:7520255:A:G	rs7851843	A	G	A	Sox2_MA0143.3	3	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr9	7520273	7520274	chr9:7520274:C:T	rs7865991	C	T	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr9	7542966	7542967	chr9:7542967:A:G	rs10976384	A	G	A	Sox2_MA0143.3	17	0	+	0	0	.
chr9	7543663	7543664	chr9:7543664:C:T	rs12344464	C	T	T	Sox2_MA0143.3	14	0	-	0	0	.
chr9	7543674	7543675	chr9:7543675:A:G	rs62530070	A	G	A	Sox2_MA0143.3	3	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr9	7545824	7545825	chr9:7545825:A:G	rs62530076	A	G	g	Sox2_MA0143.3	25	0	+	0	0	.
chr9	7656881	7656882	chr9:7656882:G:C	rs143115489	G	C	G	Sox2_MA0143.3	21	0	+	0	0	.
chr9	7665855	7665856	chr9:7665856:A:G	rs9942919	A	G	G	Sox2_MA0143.3	19	0	+	0	0	.
chr9	7694843	7694844	chr9:7694844:T:C	rs1332909	T	C	C	Sox2_MA0143.3	19	0	-	0	0	.
chr9	7788859	7788860	chr9:7788860:T:C	rs35483136	T	C	T	Sox2_MA0143.3	3	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr9	7790417	7790418	chr9:7790418:G:C	rs67023560	G	C	G	Sox2_MA0143.3	19	0	+	0	0	.
chr9	7899825	7899826	chr9:7899826:C:T	rs10976651	C	T	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr9	8144616	8144617	chr9:8144617:C:T	rs7026682	C	T	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr9	8270406	8270407	chr9:8270407:G:A	rs10758947	G	A	A	Sox2_MA0143.3	10	0	-	0	0	.
chr9	8415723	8415724	chr9:8415724:C:G	rs4742500	C	G	G	Sox2_MA0143.3	20	0	-	0	0	.
chr9	8473567	8473568	chr9:8473568:C:T	rs10977142	C	T	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr9	8486481	8486482	chr9:8486482:T:C	rs13292865	T	C	T	Sox2_MA0143.3	-15	0	+	0	0	.
chr9	8514859	8514860	chr9:8514860:G:C	rs12341078	G	C	G	Sox2_MA0143.3	0	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr9	8559554	8559555	chr9:8559555:G:T	rs12006485	G	T	G	Sox2_MA0143.3	22	0	+	0	0	.
chr9	8701700	8701701	chr9:8701701:G:C	rs7863841	G	C	C	Sox2_MA0143.3	5	1	+	9.206767037375712	2.298012258060492	CCTTTGTC
chr9	8756139	8756140	chr9:8756140:C:A	rs956154	C	A	A	Sox2_MA0143.3	-4	0	-	0	0	.
chr9	8816587	8816588	chr9:8816588:G:C	rs12342324	G	C	G	Sox2_MA0143.3	1	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr9	8825714	8825715	chr9:8825715:T:C	rs72702400	T	C	T	Sox2_MA0143.3	-10	0	+	0	0	.
chr9	8922466	8922467	chr9:8922467:G:A	rs10977362	G	A	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr9	9182251	9182252	chr9:9182252:T:A	rs12379071	T	A	T	Sox2_MA0143.3	13	0	+	0	0	.
chr9	9346983	9346984	chr9:9346984:T:C	rs6477391	T	C	C	Sox2_MA0143.3	6	1	+	8.676919043985553	1.7681642646703326	CCATTGTG
chr9	9387683	9387684	chr9:9387684:C:T	rs16929240	C	T	T	Sox2_MA0143.3	-19	0	+	0	0	.
chr9	9387705	9387706	chr9:9387706:T:C	rs36048836	T	C	T	Sox2_MA0143.3	3	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr9	9534454	9534455	chr9:9534455:G:C	rs7046080	G	C	G	Sox2_MA0143.3	27	0	-	0	0	.
chr9	9621486	9621487	chr9:9621487:A:G	rs16929919	A	G	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr9	9820400	9820401	chr9:9820401:T:C	rs2761758	T	C	C	Sox2_MA0143.3	15	0	+	0	0	.
chr9	9847983	9847984	chr9:9847984:G:A	rs7872395	G	A	G	Sox2_MA0143.3	0	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr9	10144583	10144584	chr9:10144584:T:C	rs12552479	T	C	T	Sox2_MA0143.3	2	1	-	9.613475778572903	3.494828071296623	CCATTGTT
chr9	10168459	10168460	chr9:10168460:T:C	rs1407355	T	C	T	Sox2_MA0143.3	4	1	+	8.864090315184848	1.9553355358696274	CCTTTGTG
chr9	10173019	10173020	chr9:10173020:C:T	rs4740444	C	T	C	Sox2_MA0143.3	17	0	+	0	0	.
chr9	10252493	10252494	chr9:10252494:T:C	rs10958979	T	C	C	Sox2_MA0143.3	18	0	+	0	0	.
chr9	10265616	10265617	chr9:10265617:C:T	rs2475346	C	T	C	Sox2_MA0143.3	7	1	-	8.864090315184848	3.5547341015215945	CCTTTGTG
chr9	10273832	10273833	chr9:10273833:C:G	rs1323502	C	G	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr9	10479375	10479376	chr9:10479376:G:A	rs1953594	G	A	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr9	11186180	11186181	chr9:11186181:C:T	rs113195236	C	T	C	Sox2_MA0143.3	5	1	-	9.613475778572903	2.7047209992576837	CCATTGTT
chr9	11241095	11241096	chr9:11241096:G:A	rs10809397	G	A	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr9	11319688	11319689	chr9:11319689:C:G	rs140464256	C	G	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr9	11439540	11439541	chr9:11439541:T:G	rs58311468	T	G	T	Sox2_MA0143.3	-11	0	+	0	0	.
chr9	11526768	11526769	chr9:11526769:A:G	rs10809508	A	G	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr9	11550695	11550696	chr9:11550696:T:A	rs73646464	T	A	T	Sox2_MA0143.3	19	0	-	0	0	.
chr9	11777952	11777953	chr9:11777953:G:A	rs55785302	G	A	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr9	11821474	11821475	chr9:11821475:G:A	rs114014244	G	A	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr9	12053319	12053320	chr9:12053320:G:A	rs73646874	G	A	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr9	12054504	12054505	chr9:12054505:A:T	rs7032083	A	T	T	Sox2_MA0143.3	8	0	+	0	0	.
chr9	12054516	12054517	chr9:12054517:G:A	rs9969852	G	A	G	Sox2_MA0143.3	20	0	+	0	0	.
chr9	12162373	12162374	chr9:12162374:T:C	rs10809704	T	C	T	Sox2_MA0143.3	10	0	+	0	0	.
chr9	12272970	12272971	chr9:12272971:A:T	rs118004486	A	T	A	Sox2_MA0143.3	-15	0	+	0	0	.
chr9	12276702	12276703	chr9:12276703:T:C	rs7034103	T	C	T	Sox2_MA0143.3	18	0	+	0	0	.
chr9	12289888	12289889	chr9:12289889:G:C	rs1386544319	G	C	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr9	12624356	12624357	chr9:12624357:G:T	rs977888	G	T	g	Sox2_MA0143.3	-11	0	+	0	0	.
chr9	12668120	12668121	chr9:12668121:C:G	rs10809818	C	G	c	Sox2_MA0143.3	1	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr9	12748191	12748192	chr9:12748192:A:C	rs13300005	A	C	A	Sox2_MA0143.3	4	1	-	9.206767037375712	2.2980122580604916	CCTTTGTC
chr9	12790687	12790688	chr9:12790688:C:T	rs16929541	C	T	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr9	12816938	12816939	chr9:12816939:G:C	rs4740532	G	C	G	Sox2_MA0143.3	-12	0	+	0	0	.
chr9	12819031	12819032	chr9:12819032:G:C	rs7021941	G	C	G	Sox2_MA0143.3	21	0	+	0	0	.
chr9	13131247	13131248	chr9:13131248:A:G	rs1392670924	A	G	A	Sox2_MA0143.3	13	0	-	0	0	.
chr9	13140096	13140097	chr9:13140097:G:A	rs76115127	G	A	G	Sox2_MA0143.3	16	0	-	0	0	.
chr9	13263764	13263765	chr9:13263765:T:C	rs1980994	T	C	T	Sox2_MA0143.3	-17	0	+	0	0	.
chr9	13386946	13386947	chr9:13386947:C:A	rs10961035	C	A	A	Sox2_MA0143.3	-17	0	-	0	0	.
chr9	13591906	13591907	chr9:13591907:C:T	rs13299116	C	T	c	Sox2_MA0143.3	-16	0	+	0	0	.
chr9	13598939	13598940	chr9:13598940:A:C	rs2039465	A	C	C	Sox2_MA0143.3	3	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr9	13627511	13627512	chr9:13627512:G:A	rs62533172	G	A	G	Sox2_MA0143.3	24	0	+	0	0	.
chr9	13734918	13734919	chr9:13734919:A:G	rs116339698	A	G	A	Sox2_MA0143.3	-2	0	+	0	0	.
chr9	13734938	13734939	chr9:13734939:A:C	rs142868804	A	C	A	Sox2_MA0143.3	18	0	+	0	0	.
chr9	13743702	13743703	chr9:13743703:G:C	rs1327517	G	C	G	Sox2_MA0143.3	7	1	+	8.864090315184848	9.206767037375712	CCTTTGTG
chr9	13778809	13778810	chr9:13778810:C:G	rs139951447	C	G	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr9	13805996	13805997	chr9:13805997:T:G	rs112606360	T	G	T	Sox2_MA0143.3	12	0	+	0	0	.
chr9	13857995	13857996	chr9:13857996:G:T	rs78513684	G	T	G	Sox2_MA0143.3	7	1	+	8.864090315184848	9.800647049772198	CCTTTGTG
chr9	13898880	13898881	chr9:13898881:T:A	rs1923350	T	A	T	Sox2_MA0143.3	-7	0	-	0	0	.
chr9	13954710	13954711	chr9:13954711:G:A	rs12380860	G	A	G	Sox2_MA0143.3	15	0	-	0	0	.
chr9	13954734	13954735	chr9:13954735:T:C	rs17192702	T	C	T	Sox2_MA0143.3	-9	0	-	0	0	.
chr9	14203814	14203815	chr9:14203815:G:A	rs10961420	G	A	A	Sox2_MA0143.3	-19	0	-	0	0	.
chr9	14322874	14322875	chr9:14322875:C:T	rs115473478	C	T	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr9	14322883	14322884	chr9:14322884:C:T	rs564575275	C	T	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr9	14337891	14337892	chr9:14337892:T:C	rs116007218	T	C	T	Sox2_MA0143.3	18	0	+	0	0	.
chr9	14373886	14373887	chr9:14373887:A:G	rs75363140	A	G	A	Sox2_MA0143.3	25	0	-	0	0	.
chr9	14670950	14670951	chr9:14670951:C:T	rs10961649	C	T	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr9	14706714	14706715	chr9:14706715:G:C	rs143626292	G	C	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr9	14863864	14863865	chr9:14863865:A:G	rs61740262	A	G	A	Sox2_MA0143.3	11	0	+	0	0	.
chr9	14864761	14864762	chr9:14864762:C:T	rs10810273	C	T	C	Sox2_MA0143.3	20	0	+	0	0	.
chr9	14906869	14906870	chr9:14906870:G:A	rs940120	G	A	A	Sox2_MA0143.3	-13	0	+	0	0	.
chr9	14962800	14962801	chr9:14962801:C:T	rs1412723	C	T	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr9	14994157	14994158	chr9:14994158:G:A	rs10120786	G	A	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr9	15002523	15002524	chr9:15002524:A:G	rs10810311	A	G	A	Sox2_MA0143.3	-12	0	-	0	0	.
chr9	15014022	15014023	chr9:15014023:A:G	rs10810317	A	G	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr9	15069248	15069249	chr9:15069249:G:C	rs10961860	G	C	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr9	15069257	15069258	chr9:15069258:A:G	rs72698524	A	G	A	Sox2_MA0143.3	-6	0	+	0	0	.
chr9	15086505	15086506	chr9:15086506:C:T	rs13290129	C	T	C	Sox2_MA0143.3	8	0	+	0	0	.
chr9	15100118	15100119	chr9:15100119:A:G	rs9987728	A	G	a	Sox2_MA0143.3	-15	0	+	0	0	.
chr9	15100138	15100139	chr9:15100139:G:A	rs9987457	G	A	g	Sox2_MA0143.3	5	1	+	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr9	15199814	15199815	chr9:15199815:C:T	rs41265314	C	T	T	Sox2_MA0143.3	-5	0	-	0	0	.
chr9	15242897	15242898	chr9:15242898:T:C	rs504822	T	C	C	Sox2_MA0143.3	12	0	-	0	0	.
chr9	15294455	15294456	chr9:15294456:G:T	rs115811985	G	T	G	Sox2_MA0143.3	0	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr9	15423549	15423550	chr9:15423550:G:C	rs10738392	G	C	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr9	15724134	15724135	chr9:15724135:G:T	rs7038981	G	T	G	Sox2_MA0143.3	21	0	+	0	0	.
chr9	15786818	15786819	chr9:15786819:A:T	rs10962157	A	T	A	Sox2_MA0143.3	3	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr9	15826899	15826900	chr9:15826900:T:C	rs7032634	T	C	T	Sox2_MA0143.3	27	0	-	0	0	.
chr9	15914669	15914670	chr9:15914670:A:G	rs3008692	A	G	G	Sox2_MA0143.3	19	0	-	0	0	.
chr9	16030607	16030608	chr9:16030608:A:G	rs1328279	A	G	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr9	16054331	16054332	chr9:16054332:G:C	rs12380692	G	C	G	Sox2_MA0143.3	26	0	-	0	0	.
chr9	16062345	16062346	chr9:16062346:A:G	rs11792610	A	G	A	Sox2_MA0143.3	25	0	-	0	0	.
chr9	16092486	16092487	chr9:16092487:C:T	rs9695323	C	T	T	Sox2_MA0143.3	-1	0	+	0	0	.
chr9	16092507	16092508	chr9:16092508:C:T	rs9695329	C	T	C	Sox2_MA0143.3	20	0	+	0	0	.
chr9	16101162	16101163	chr9:16101163:A:G	rs78255404	A	G	A	Sox2_MA0143.3	-2	0	-	0	0	.
chr9	16232109	16232110	chr9:16232110:T:C	rs72712865	T	C	T	Sox2_MA0143.3	-11	0	-	0	0	.
chr9	16311846	16311847	chr9:16311847:C:T	rs10962375	C	T	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr9	16329538	16329539	chr9:16329539:C:T	rs1888955	C	T	T	Sox2_MA0143.3	20	0	-	0	0	.
chr9	16333630	16333631	chr9:16333631:G:A	rs7046272	G	A	A	Sox2_MA0143.3	11	0	+	0	0	.
chr9	16388912	16388913	chr9:16388913:C:T	rs75729194	C	T	C	Sox2_MA0143.3	27	0	-	0	0	.
chr9	16449789	16449790	chr9:16449790:T:C	rs12338207	T	C	T	Sox2_MA0143.3	-4	0	-	0	0	.
chr9	16488237	16488238	chr9:16488238:G:C	rs7872452	G	C	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr9	16522103	16522104	chr9:16522104:G:C	chr9:16522104:G:C	G	C	G	Sox2_MA0143.3	-3	0	+	0	0	.
chr9	16602655	16602656	chr9:16602656:G:A	rs7856477	G	A	A	Sox2_MA0143.3	-11	0	+	0	0	.
chr9	16602655	16602656	chr9:16602656:G:T	chr9:16602656:G:T	G	T	A	Sox2_MA0143.3	-11	0	+	0	0	.
chr9	16628020	16628021	chr9:16628021:T:G	rs79538366	T	G	T	Sox2_MA0143.3	-10	0	+	0	0	.
chr9	16689292	16689293	chr9:16689293:C:T	rs10810590	C	T	T	Sox2_MA0143.3	16	0	-	0	0	.
chr9	16810348	16810349	chr9:16810349:C:T	rs11788776	C	T	T	Sox2_MA0143.3	7	1	+	9.206767037375712	9.800647049772198	CCTTTGTC
chr9	17014000	17014001	chr9:17014001:C:G	rs78272478	C	G	c	Sox2_MA0143.3	25	0	-	0	0	.
chr9	17014027	17014028	chr9:17014028:G:A	rs1487499	G	A	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr9	17134398	17134399	chr9:17134399:G:A	rs116115743	G	A	G	Sox2_MA0143.3	18	0	-	0	0	.
chr9	17134439	17134440	chr9:17134440:A:T	rs145651967	A	T	A	Sox2_MA0143.3	-12	0	-	0	0	.
chr9	17230087	17230088	chr9:17230088:G:A	rs10962917	G	A	A	Sox2_MA0143.3	18	0	-	0	0	.
chr9	17291264	17291265	chr9:17291265:A:G	rs34256131	A	G	A	Sox2_MA0143.3	-15	0	+	0	0	.
chr9	17512926	17512927	chr9:17512927:C:G	rs2593365	C	G	C	Sox2_MA0143.3	8	0	+	0	0	.
chr9	17626351	17626352	chr9:17626352:C:G	rs7847429	C	G	G	Sox2_MA0143.3	24	0	+	0	0	.
chr9	17776145	17776146	chr9:17776146:C:T	rs13291415	C	T	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr9	18082705	18082706	chr9:18082706:T:C	rs1329923	T	C	T	Sox2_MA0143.3	-5	0	+	0	0	.
chr9	18110038	18110039	chr9:18110039:C:T	rs549861	C	T	C	Sox2_MA0143.3	23	0	-	0	0	.
chr9	18110058	18110059	chr9:18110059:A:G	rs7853587	A	G	A	Sox2_MA0143.3	3	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr9	18117587	18117588	chr9:18117588:A:C	rs112706650	A	C	A	Sox2_MA0143.3	-10	0	+	0	0	.
chr9	18238158	18238159	chr9:18238159:G:A	rs7038948	G	A	A	Sox2_MA0143.3	5	1	+	8.676919043985553	1.7681642646703324	CCATTGTG
chr9	18238315	18238316	chr9:18238316:C:T	rs7038985	C	T	C	Sox2_MA0143.3	1	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr9	18325723	18325724	chr9:18325724:C:T	rs10119710	C	T	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr9	18331117	18331118	chr9:18331118:G:C	rs3924761	G	C	C	Sox2_MA0143.3	13	0	-	0	0	.
chr9	18331123	18331124	chr9:18331124:A:C	rs28513111	A	C	A	Sox2_MA0143.3	7	1	-	9.800647049772198	8.864090315184848	CCTTTGTT
chr9	18346889	18346890	chr9:18346890:A:G	rs943982036	A	G	A	Sox2_MA0143.3	8	0	-	0	0	.
chr9	18423033	18423034	chr9:18423034:A:T	rs7852203	A	T	A	Sox2_MA0143.3	20	0	+	0	0	.
chr9	18543360	18543361	chr9:18543361:C:G	rs34587944	C	G	C	Sox2_MA0143.3	19	0	-	0	0	.
chr9	18544165	18544166	chr9:18544166:A:G	rs10810985	A	G	G	Sox2_MA0143.3	17	0	-	0	0	.
chr9	18570331	18570332	chr9:18570332:T:C	rs34330935	T	C	T	Sox2_MA0143.3	21	0	+	0	0	.
chr9	18612385	18612386	chr9:18612386:C:T	rs10963667	C	T	C	Sox2_MA0143.3	-20	0	-	0	0	.
chr9	18629284	18629285	chr9:18629285:G:A	rs10963680	G	A	G	Sox2_MA0143.3	20	0	-	0	0	.
chr9	18633237	18633238	chr9:18633238:T:C	rs58204184	T	C	T	Sox2_MA0143.3	17	0	+	0	0	.
chr9	18676212	18676213	chr9:18676213:T:C	rs776763	T	C	T	Sox2_MA0143.3	9	0	+	0	0	.
chr9	18679096	18679097	chr9:18679097:C:G	rs76216322	C	G	C	Sox2_MA0143.3	1	1	+	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr9	18718115	18718116	chr9:18718116:A:C	rs4977339	A	C	A	Sox2_MA0143.3	2	1	+	9.019595766176417	2.900948058900136	CCATTGTC
chr9	18718140	18718141	chr9:18718141:C:G	rs532101	C	G	G	Sox2_MA0143.3	27	0	+	0	0	.
chr9	18771507	18771508	chr9:18771508:G:C	rs12349446	G	C	G	Sox2_MA0143.3	26	0	+	0	0	.
chr9	18804356	18804357	chr9:18804357:G:C	rs12353154	G	C	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr9	18914730	18914731	chr9:18914731:A:C	rs7860467	A	C	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr9	18979442	18979443	chr9:18979443:A:G	rs1932445	A	G	A	Sox2_MA0143.3	3	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr9	19021983	19021984	chr9:19021984:G:C	rs10811101	G	C	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr9	19065153	19065154	chr9:19065154:G:C	rs4645631	G	C	G	Sox2_MA0143.3	0	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr9	19283930	19283931	chr9:19283931:C:T	rs75915245	C	T	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr9	19343217	19343218	chr9:19343218:A:G	rs7849286	A	G	G	Sox2_MA0143.3	-14	0	+	0	0	.
chr9	19464655	19464656	chr9:19464656:G:T	rs61411294	G	T	T	Sox2_MA0143.3	-14	0	+	0	0	.
chr9	19470161	19470162	chr9:19470162:G:T	rs10811190	G	T	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr9	19479537	19479538	chr9:19479538:G:T	rs7046383	G	T	G	Sox2_MA0143.3	11	0	+	0	0	.
chr9	19512070	19512071	chr9:19512071:A:G	rs7871654	A	G	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr9	19558818	19558819	chr9:19558819:C:T	rs7858369	C	T	T	Sox2_MA0143.3	-1	0	-	0	0	.
chr9	19748489	19748490	chr9:19748490:G:T	rs7037949	G	T	T	Sox2_MA0143.3	20	0	+	0	0	.
chr9	19763241	19763242	chr9:19763242:T:C	rs61701868	T	C	T	Sox2_MA0143.3	-14	0	-	0	0	.
chr9	19897265	19897266	chr9:19897266:T:C	rs4977348	T	C	T	Sox2_MA0143.3	21	0	+	0	0	.
chr9	19926285	19926286	chr9:19926286:C:T	rs190968858	C	T	c	Sox2_MA0143.3	21	0	+	0	0	.
chr9	20066702	20066703	chr9:20066703:G:A	rs10118525	G	A	a	Sox2_MA0143.3	-16	0	+	0	0	.
chr9	20190564	20190565	chr9:20190565:T:C	rs7875130	T	C	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr9	20255356	20255357	chr9:20255357:A:G	rs1551534	A	G	A	Sox2_MA0143.3	-4	0	+	0	0	.
chr9	20270908	20270909	chr9:20270909:C:A	rs7020895	C	A	A	Sox2_MA0143.3	-18	0	+	0	0	.
chr9	20280550	20280551	chr9:20280551:G:T	chr9:20280551:G:T	G	T	G	Sox2_MA0143.3	16	0	+	0	0	.
chr9	20545407	20545408	chr9:20545408:A:C	rs72701925	A	C	A	Sox2_MA0143.3	-12	0	+	0	0	.
chr9	20553371	20553372	chr9:20553372:G:A	rs143223369	G	A	G	Sox2_MA0143.3	15	0	-	0	0	.
chr9	20603758	20603759	chr9:20603759:G:A	rs756728	G	A	G	Sox2_MA0143.3	22	0	+	0	0	.
chr9	20640968	20640969	chr9:20640969:G:A	rs9298807	G	A	A	Sox2_MA0143.3	24	0	+	0	0	.
chr9	20664771	20664772	chr9:20664772:C:A	rs4977438	C	A	C	Sox2_MA0143.3	8	0	+	0	0	.
chr9	20825635	20825636	chr9:20825636:T:C	rs7867326	T	C	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr9	20941309	20941310	chr9:20941310:G:C	rs7045808	G	C	C	Sox2_MA0143.3	20	0	+	0	0	.
chr9	20974346	20974347	chr9:20974347:T:C	rs10964774	T	C	t	Sox2_MA0143.3	26	0	+	0	0	.
chr9	21082149	21082150	chr9:21082150:C:T	rs546260616	C	T	C	Sox2_MA0143.3	26	0	+	0	0	.
chr9	21097764	21097765	chr9:21097765:T:C	rs72687828	T	C	T	Sox2_MA0143.3	21	0	-	0	0	.
chr9	21107963	21107964	chr9:21107964:G:C	rs4977960	G	C	C	Sox2_MA0143.3	20	0	-	0	0	.
chr9	21111006	21111007	chr9:21111007:A:C	rs117301404	A	C	A	Sox2_MA0143.3	17	0	-	0	0	.
chr9	21144920	21144921	chr9:21144921:C:G	rs10757190	C	G	c	Sox2_MA0143.3	5	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr9	21335043	21335044	chr9:21335044:A:C	rs139218089	A	C	A	Sox2_MA0143.3	9	0	-	0	0	.
chr9	21350620	21350621	chr9:21350621:G:A	rs2988573	G	A	G	Sox2_MA0143.3	16	0	+	0	0	.
chr9	21438684	21438685	chr9:21438685:A:G	rs1332190	A	G	A	Sox2_MA0143.3	4	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr9	21556280	21556281	chr9:21556281:G:A	rs10491564	G	A	G	Sox2_MA0143.3	-14	0	+	0	0	.
chr9	21659992	21659993	chr9:21659993:G:C	rs17789351	G	C	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr9	21711735	21711736	chr9:21711736:C:G	rs2891164	C	G	C	Sox2_MA0143.3	18	0	+	0	0	.
chr9	21959751	21959752	chr9:21959752:T:C	rs2518717	T	C	C	Sox2_MA0143.3	13	0	+	0	0	.
chr9	22052734	22052735	chr9:22052735:T:C	rs6475604	T	C	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr9	22052760	22052761	chr9:22052761:T:G	chr9:22052761:T:G	T	G	T	Sox2_MA0143.3	17	0	+	0	0	.
chr9	22074793	22074794	chr9:22074794:T:C	rs7855162	T	C	C	Sox2_MA0143.3	7	1	+	9.800647049772198	9.206767037375712	CCTTTGTT
chr9	22115105	22115106	chr9:22115106:C:A	rs10965235	C	A	A	Sox2_MA0143.3	15	0	-	0	0	.
chr9	22118102	22118103	chr9:22118103:T:G	rs17761446	T	G	T	Sox2_MA0143.3	8	0	-	0	0	.
chr9	22148311	22148312	chr9:22148312:G:C	rs138061946	G	C	G	Sox2_MA0143.3	0	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr9	22239567	22239568	chr9:22239568:G:A	rs1409773	G	A	A	Sox2_MA0143.3	-6	0	-	0	0	.
chr9	22446828	22446829	chr9:22446829:A:G	rs655497	A	G	A	Sox2_MA0143.3	-10	0	-	0	0	.
chr9	22863949	22863950	chr9:22863950:T:G	rs7022326	T	G	G	Sox2_MA0143.3	25	0	-	0	0	.
chr9	23031492	23031493	chr9:23031493:T:C	rs74828336	T	C	T	Sox2_MA0143.3	-16	0	-	0	0	.
chr9	23254623	23254624	chr9:23254624:G:A	rs7871692	G	A	A	Sox2_MA0143.3	-15	0	-	0	0	.
chr9	23282775	23282776	chr9:23282776:G:T	rs62538778	G	T	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr9	23551712	23551713	chr9:23551713:A:G	rs551327579	A	G	A	Sox2_MA0143.3	-19	0	-	0	0	.
chr9	23699734	23699735	chr9:23699735:G:A	rs1854443	G	A	G	Sox2_MA0143.3	1	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr9	24350223	24350224	chr9:24350224:T:C	rs12350715	T	C	C	Sox2_MA0143.3	3	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr9	24754536	24754537	chr9:24754537:A:C	rs4129728	A	C	C	Sox2_MA0143.3	18	0	-	0	0	.
chr9	25290189	25290190	chr9:25290190:G:C	rs1662243	G	C	g	Sox2_MA0143.3	24	0	-	0	0	.
chr9	25397009	25397010	chr9:25397010:C:T	rs10738720	C	T	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr9	25397945	25397946	chr9:25397946:T:G	rs945812	T	G	G	Sox2_MA0143.3	10	0	-	0	0	.
chr9	25403773	25403774	chr9:25403774:G:A	rs10757536	G	A	G	Sox2_MA0143.3	1	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr9	25551628	25551629	chr9:25551629:A:G	rs7028018	A	G	G	Sox2_MA0143.3	10	0	-	0	0	.
chr9	25551644	25551645	chr9:25551645:A:T	rs10738722	A	T	A	Sox2_MA0143.3	-6	0	-	0	0	.
chr9	25716145	25716146	chr9:25716146:T:G	rs12551353	T	G	T	Sox2_MA0143.3	13	0	-	0	0	.
chr9	25716149	25716150	chr9:25716150:G:A	rs72710512	G	A	G	Sox2_MA0143.3	9	0	-	0	0	.
chr9	25741078	25741079	chr9:25741079:C:T	rs1231340	C	T	t	Sox2_MA0143.3	5	1	-	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr9	25742425	25742426	chr9:25742426:C:G	rs113077676	C	G	C	Sox2_MA0143.3	11	0	+	0	0	.
chr9	25742532	25742533	chr9:25742533:G:A	rs1231343	G	A	G	Sox2_MA0143.3	0	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr9	25840671	25840672	chr9:25840672:C:T	rs7857646	C	T	T	Sox2_MA0143.3	5	1	-	8.676919043985553	1.7681642646703324	CCATTGTG
chr9	26078376	26078377	chr9:26078377:C:T	rs7029623	C	T	T	Sox2_MA0143.3	-3	0	+	0	0	.
chr9	26435579	26435580	chr9:26435580:G:C	rs72716233	G	C	G	Sox2_MA0143.3	26	0	+	0	0	.
chr9	26439302	26439303	chr9:26439303:C:G	rs118116921	C	G	C	Sox2_MA0143.3	27	0	-	0	0	.
chr9	26524685	26524686	chr9:26524686:C:T	rs4978076	C	T	T	Sox2_MA0143.3	1	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr9	26637394	26637395	chr9:26637395:A:C	rs7027236	A	C	A	Sox2_MA0143.3	-14	0	-	0	0	.
chr9	26775375	26775376	chr9:26775376:A:G	rs2060410	A	G	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr9	26809915	26809916	chr9:26809916:A:G	rs115052734	A	G	A	Sox2_MA0143.3	22	0	-	0	0	.
chr9	26892975	26892976	chr9:26892976:T:G	rs3739547	T	G	T	Sox2_MA0143.3	16	0	-	0	0	.
chr9	26896721	26896722	chr9:26896722:C:T	rs77953007	C	T	c	Sox2_MA0143.3	-11	0	-	0	0	.
chr9	27078800	27078801	chr9:27078801:A:G	rs56903929	A	G	A	Sox2_MA0143.3	-4	0	+	0	0	.
chr9	27118324	27118325	chr9:27118325:C:A	rs10967724	C	A	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr9	27195054	27195055	chr9:27195055:C:T	rs4879251	C	T	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr9	27213581	27213582	chr9:27213582:T:C	rs3737188	T	C	T	Sox2_MA0143.3	16	0	-	0	0	.
chr9	27341327	27341328	chr9:27341328:C:T	rs76672070	C	T	C	Sox2_MA0143.3	15	0	-	0	0	.
chr9	27341339	27341340	chr9:27341340:A:G	rs7041639	A	G	A	Sox2_MA0143.3	3	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr9	27351662	27351663	chr9:27351663:C:T	rs7031858	C	T	T	Sox2_MA0143.3	-18	0	-	0	0	.
chr9	27428666	27428667	chr9:27428667:A:T	rs763372	A	T	A	Sox2_MA0143.3	6	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr9	27428811	27428812	chr9:27428812:C:T	rs62541566	C	T	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr9	27441538	27441539	chr9:27441539:C:T	rs2589053	C	T	T	Sox2_MA0143.3	23	0	-	0	0	.
chr9	27447090	27447091	chr9:27447091:G:A	rs1058326	G	A	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr9	27447425	27447426	chr9:27447426:G:A	rs182691932	G	A	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr9	27447435	27447436	chr9:27447436:G:A	rs1822725	G	A	A	Sox2_MA0143.3	9	0	+	0	0	.
chr9	27534413	27534414	chr9:27534414:C:G	rs34606070	C	G	C	Sox2_MA0143.3	26	0	-	0	0	.
chr9	27589658	27589659	chr9:27589659:A:G	rs696826	A	G	A	Sox2_MA0143.3	16	0	-	0	0	.
chr9	27689062	27689063	chr9:27689063:G:A	rs7030973	G	A	G	Sox2_MA0143.3	17	0	+	0	0	.
chr9	27802679	27802680	chr9:27802680:C:T	rs10114706	C	T	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr9	27806831	27806832	chr9:27806832:G:T	rs13291602	G	T	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr9	27904342	27904343	chr9:27904343:G:A	rs2383743	G	A	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr9	27934055	27934056	chr9:27934056:C:T	rs7025569	C	T	T	Sox2_MA0143.3	-15	0	+	0	0	.
chr9	28043291	28043292	chr9:28043292:A:C	rs1198007	A	C	A	Sox2_MA0143.3	-4	0	+	0	0	.
chr9	28156781	28156782	chr9:28156782:G:T	rs10812746	G	T	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr9	28389499	28389500	chr9:28389500:C:T	rs1029062	C	T	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr9	28439671	28439672	chr9:28439672:C:T	rs7040097	C	T	C	Sox2_MA0143.3	14	0	+	0	0	.
chr9	28582399	28582400	chr9:28582400:T:C	rs1996774	T	C	T	Sox2_MA0143.3	26	0	-	0	0	.
chr9	28582441	28582442	chr9:28582442:C:T	rs59202079	C	T	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr9	28591874	28591875	chr9:28591875:C:T	rs16913358	C	T	T	Sox2_MA0143.3	5	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr9	28956224	28956225	chr9:28956225:C:T	rs10968831	C	T	C	Sox2_MA0143.3	-12	0	-	0	0	.
chr9	29018840	29018841	chr9:29018841:A:G	rs7047050	A	G	A	Sox2_MA0143.3	-12	0	-	0	0	.
chr9	29188563	29188564	chr9:29188564:G:C	rs10969002	G	C	g	Sox2_MA0143.3	13	0	+	0	0	.
chr9	29325151	29325152	chr9:29325152:A:G	rs1169753	A	G	G	Sox2_MA0143.3	-2	0	+	0	0	.
chr9	29349260	29349261	chr9:29349261:G:C	rs7046655	G	C	G	Sox2_MA0143.3	19	0	-	0	0	.
chr9	29436824	29436825	chr9:29436825:C:A	rs13291586	C	A	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr9	29465920	29465921	chr9:29465921:C:T	rs4445309	C	T	T	Sox2_MA0143.3	12	0	-	0	0	.
chr9	29510391	29510392	chr9:29510392:T:C	rs568020908	T	C	T	Sox2_MA0143.3	6	1	+	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr9	29510398	29510399	chr9:29510399:A:G	rs617229	A	G	G	Sox2_MA0143.3	13	0	+	0	0	.
chr9	29599174	29599175	chr9:29599175:T:C	rs78562403	T	C	T	Sox2_MA0143.3	-17	0	-	0	0	.
chr9	29750304	29750305	chr9:29750305:G:T	rs144393626	G	T	g	Sox2_MA0143.3	12	0	-	0	0	.
chr9	30514678	30514679	chr9:30514679:T:G	rs7018745	T	G	T	Sox2_MA0143.3	20	0	-	0	0	.
chr9	30654684	30654685	chr9:30654685:G:C	rs6476211	G	C	C	Sox2_MA0143.3	5	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr9	30677334	30677335	chr9:30677335:C:T	rs12337598	C	T	T	Sox2_MA0143.3	24	0	+	0	0	.
chr9	30758590	30758591	chr9:30758591:C:T	rs78332572	C	T	C	Sox2_MA0143.3	8	0	+	0	0	.
chr9	30844311	30844312	chr9:30844312:A:C	rs10969889	A	C	C	Sox2_MA0143.3	4	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr9	31024266	31024267	chr9:31024267:C:T	rs10511873	C	T	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr9	31100469	31100470	chr9:31100470:A:G	rs141758942	A	G	A	Sox2_MA0143.3	4	1	-	3.5547341015215945	-3.3540206777936254	CCTTTGTA
chr9	31126039	31126040	chr9:31126040:A:T	rs10970116	A	T	T	Sox2_MA0143.3	2	1	-	8.864090315184848	8.676919043985553	CCTTTGTG
chr9	31188681	31188682	chr9:31188682:C:A	rs10813503	C	A	A	Sox2_MA0143.3	7	1	-	8.676919043985553	9.613475778572903	CCATTGTG
chr9	31193339	31193340	chr9:31193340:T:C	rs10465068	T	C	C	Sox2_MA0143.3	2	1	+	8.864090315184848	2.5582713367092715	CCTTTGTG
chr9	31233305	31233306	chr9:31233306:T:C	rs10970228	T	C	T	Sox2_MA0143.3	26	0	-	0	0	.
chr9	31854192	31854193	chr9:31854193:A:G	rs11795065	A	G	G	Sox2_MA0143.3	2	1	-	8.864090315184848	2.5582713367092715	CCTTTGTG
chr9	31868955	31868956	chr9:31868956:A:G	rs73646911	A	G	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr9	31983918	31983919	chr9:31983919:T:C	rs3912274	T	C	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr9	32171762	32171763	chr9:32171763:T:A	rs3932243	T	A	T	Sox2_MA0143.3	26	0	-	0	0	.
chr9	32291152	32291153	chr9:32291153:C:T	rs111556004	C	T	C	Sox2_MA0143.3	17	0	+	0	0	.
chr9	32344659	32344660	chr9:32344660:A:C	rs116981681	A	C	A	Sox2_MA0143.3	20	0	-	0	0	.
chr9	32378957	32378958	chr9:32378958:A:G	rs10813801	A	G	A	Sox2_MA0143.3	3	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr9	32456779	32456780	chr9:32456780:C:G	rs56873995	C	G	G	Sox2_MA0143.3	5	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr9	32503441	32503442	chr9:32503442:T:C	rs669260	T	C	C	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr9	32573254	32573255	chr9:32573255:A:G	rs555424295	A	G	A	Sox2_MA0143.3	4	1	-	8.864090315184848	1.9553355358696274	CCTTTGTG
chr9	32573267	32573268	chr9:32573268:T:C	rs150832803	T	C	T	Sox2_MA0143.3	-9	0	-	0	0	.
chr9	32741429	32741430	chr9:32741430:G:A	rs1410831	G	A	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr9	33002025	33002026	chr9:33002026:T:G	rs112025968	T	G	T	Sox2_MA0143.3	-5	0	+	0	0	.
chr9	33002057	33002058	chr9:33002058:C:G	rs10813921	C	G	G	Sox2_MA0143.3	27	0	+	0	0	.
chr9	33023834	33023835	chr9:33023835:T:C	rs10758179	T	C	T	Sox2_MA0143.3	15	0	-	0	0	.
chr9	33025811	33025812	chr9:33025812:C:T	rs921319182	C	T	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr9	33044956	33044957	chr9:33044957:T:C	rs41274011	T	C	T	Sox2_MA0143.3	8	0	-	0	0	.
chr9	33106268	33106269	chr9:33106269:G:C	rs77213180	G	C	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr9	33126648	33126649	chr9:33126649:T:G	rs377417123	T	G	T	Sox2_MA0143.3	23	0	+	0	0	.
chr9	33151097	33151098	chr9:33151098:G:A	rs143318915	G	A	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr9	33176648	33176649	chr9:33176649:G:A	rs943930	G	A	A	Sox2_MA0143.3	25	0	-	0	0	.
chr9	33181157	33181158	chr9:33181158:G:A	rs10971440	G	A	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr9	33244946	33244947	chr9:33244947:C:T	rs1890089	C	T	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr9	33375502	33375503	chr9:33375503:G:A	rs947774196	G	A	G	Sox2_MA0143.3	27	0	+	0	0	.
chr9	33377999	33378000	chr9:33378000:A:G	rs60257421	A	G	A	Sox2_MA0143.3	-9	0	+	0	0	.
chr9	33426684	33426685	chr9:33426685:C:G	rs11789227	C	G	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr9	33426685	33426686	chr9:33426686:A:G	rs11793166	A	G	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr9	33427702	33427703	chr9:33427703:T:C	rs10813977	T	C	T	Sox2_MA0143.3	-20	0	-	0	0	.
chr9	33451137	33451138	chr9:33451138:A:C	rs2777753	A	C	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr9	33456872	33456873	chr9:33456873:G:A	rs76139196	G	A	G	Sox2_MA0143.3	20	0	-	0	0	.
chr9	33467615	33467616	chr9:33467616:T:C	rs501213	T	C	T	Sox2_MA0143.3	-5	0	+	0	0	.
chr9	33489064	33489065	chr9:33489065:A:G	rs112711195	A	G	A	Sox2_MA0143.3	2	1	+	8.676919043985553	2.5582713367092715	CCATTGTG
chr9	33511180	33511181	chr9:33511181:G:T	rs924919334	G	T	.	Sox2_MA0143.3	-13	0	-	0	0	.
chr9	33570931	33570932	chr9:33570932:G:A	rs62559880	G	A	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr9	33624430	33624431	chr9:33624431:A:C	rs855523	A	C	.	Sox2_MA0143.3	-6	0	+	0	0	.
chr9	33644228	33644229	chr9:33644229:A:C	rs67170061	A	C	.	Sox2_MA0143.3	-2	0	+	0	0	.
chr9	33647381	33647382	chr9:33647382:G:T	rs76742417	G	T	.	Sox2_MA0143.3	14	0	-	0	0	.
chr9	33818230	33818231	chr9:33818231:C:G	rs566209683	C	G	C	Sox2_MA0143.3	13	0	+	0	0	.
chr9	33818725	33818726	chr9:33818726:C:T	rs924907078	C	T	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr9	34034926	34034927	chr9:34034927:A:T	rs1760816	A	T	A	Sox2_MA0143.3	19	0	-	0	0	.
chr9	34253004	34253005	chr9:34253005:G:C	rs144214232	G	C	G	Sox2_MA0143.3	16	0	+	0	0	.
chr9	34282430	34282431	chr9:34282431:C:G	rs2380927	C	G	G	Sox2_MA0143.3	19	0	-	0	0	.
chr9	34397867	34397868	chr9:34397868:C:G	rs13294816	C	G	C	Sox2_MA0143.3	21	0	+	0	0	.
chr9	34539871	34539872	chr9:34539872:C:T	rs4878577	C	T	C	Sox2_MA0143.3	8	0	-	0	0	.
chr9	34540066	34540067	chr9:34540067:C:T	rs4878578	C	T	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr9	34545905	34545906	chr9:34545906:A:G	rs148100967	A	G	A	Sox2_MA0143.3	26	0	-	0	0	.
chr9	34545933	34545934	chr9:34545934:T:G	rs4879803	T	G	T	Sox2_MA0143.3	-2	0	-	0	0	.
chr9	34567049	34567050	chr9:34567050:C:T	rs77107846	C	T	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr9	34580527	34580528	chr9:34580528:C:T	rs57324697	C	T	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr9	34960449	34960450	chr9:34960450:T:A	rs576046845	T	A	A	Sox2_MA0143.3	-4	0	-	0	0	.
chr9	34994645	34994646	chr9:34994646:C:A	rs142598693	C	A	C	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr9	35073158	35073159	chr9:35073159:C:T	rs17882628	C	T	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr9	35491228	35491229	chr9:35491229:G:T	rs7875587	G	T	G	Sox2_MA0143.3	19	0	-	0	0	.
chr9	35566754	35566755	chr9:35566755:T:C	rs4879907	T	C	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr9	35643560	35643561	chr9:35643561:G:A	rs17466775	G	A	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr9	35661945	35661946	chr9:35661946:A:C	rs72727021	A	C	A	Sox2_MA0143.3	24	0	+	0	0	.
chr9	35728021	35728022	chr9:35728022:C:A	rs10972567	C	A	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr9	35994556	35994557	chr9:35994557:G:T	rs1535912	G	T	T	Sox2_MA0143.3	1	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr9	36018913	36018914	chr9:36018914:G:A	rs6476507	G	A	A	Sox2_MA0143.3	16	0	+	0	0	.
chr9	36125151	36125152	chr9:36125152:C:G	rs10758345	C	G	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr9	36127488	36127489	chr9:36127489:C:A	rs10972745	C	A	C	Sox2_MA0143.3	17	0	-	0	0	.
chr9	36127507	36127508	chr9:36127508:A:G	rs10972746	A	G	A	Sox2_MA0143.3	-2	0	-	0	0	.
chr9	36137348	36137349	chr9:36137349:A:G	rs752353	A	G	A	Sox2_MA0143.3	-12	0	+	0	0	.
chr9	36137371	36137372	chr9:36137372:A:G	rs10758347	A	G	A	Sox2_MA0143.3	11	0	+	0	0	.
chr9	36317939	36317940	chr9:36317940:G:A	rs1105783	G	A	G	Sox2_MA0143.3	14	0	+	0	0	.
chr9	36401162	36401163	chr9:36401163:C:T	chr9:36401163:C:T	C	T	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr9	36401169	36401170	chr9:36401170:C:A	rs2480462	C	A	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr9	36401197	36401198	chr9:36401198:G:A	rs1282611221	G	A	G	Sox2_MA0143.3	25	0	+	0	0	.
chr9	36438732	36438733	chr9:36438733:T:C	rs62546163	T	C	T	Sox2_MA0143.3	-11	0	-	0	0	.
chr9	36555986	36555987	chr9:36555987:A:G	rs548640159	A	G	A	Sox2_MA0143.3	3	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr9	36666637	36666638	chr9:36666638:A:G	rs10814427	A	G	A	Sox2_MA0143.3	-12	0	+	0	0	.
chr9	36726230	36726231	chr9:36726231:C:G	rs12380409	C	G	C	Sox2_MA0143.3	16	0	-	0	0	.
chr9	36726250	36726251	chr9:36726251:A:G	rs12377676	A	G	A	Sox2_MA0143.3	-4	0	-	0	0	.
chr9	36731353	36731354	chr9:36731354:A:G	rs1887431	A	G	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr9	36739643	36739644	chr9:36739644:C:A	rs62542026	C	A	C	Sox2_MA0143.3	9	0	-	0	0	.
chr9	36781630	36781631	chr9:36781631:G:A	rs1378469257	G	A	G	Sox2_MA0143.3	7	1	-	9.019595766176417	9.613475778572903	CCATTGTC
chr9	36793447	36793448	chr9:36793448:C:T	rs2800247	C	T	C	Sox2_MA0143.3	-12	0	-	0	0	.
chr9	36798027	36798028	chr9:36798028:C:T	rs13292929	C	T	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr9	36805826	36805827	chr9:36805827:C:G	rs2812320	C	G	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr9	36848144	36848145	chr9:36848145:C:T	rs3860999	C	T	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr9	36891507	36891508	chr9:36891508:G:C	rs143303505	G	C	G	Sox2_MA0143.3	10	0	+	0	0	.
chr9	36891637	36891638	chr9:36891638:T:G	rs12551556	T	G	T	Sox2_MA0143.3	-11	0	-	0	0	.
chr9	36896145	36896146	chr9:36896146:G:A	rs1573257	G	A	G	Sox2_MA0143.3	15	0	+	0	0	.
chr9	36936362	36936363	chr9:36936363:A:G	rs3758165	A	G	G	Sox2_MA0143.3	13	0	-	0	0	.
chr9	36936391	36936392	chr9:36936392:G:A	rs3824342	G	A	G	Sox2_MA0143.3	-16	0	-	0	0	.
chr9	36936556	36936557	chr9:36936557:C:A	rs3780152	C	A	A	Sox2_MA0143.3	-17	0	-	0	0	.
chr9	36949472	36949473	chr9:36949473:G:A	rs17483803	G	A	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr9	36981585	36981586	chr9:36981586:G:A	rs72735660	G	A	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr9	37208294	37208295	chr9:37208295:A:G	rs13291191	A	G	A	Sox2_MA0143.3	12	0	+	0	0	.
chr9	37466547	37466548	chr9:37466548:C:T	rs145981763	C	T	C	Sox2_MA0143.3	14	0	-	0	0	.
chr9	37500897	37500898	chr9:37500898:T:C	rs2277161	T	C	C	Sox2_MA0143.3	20	0	-	0	0	.
chr9	37529415	37529416	chr9:37529416:A:G	rs28617752	A	G	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr9	37535078	37535079	chr9:37535079:A:C	rs16934265	A	C	t	Sox2_MA0143.3	-2	0	-	0	0	.
chr9	37609771	37609772	chr9:37609772:G:A	rs11999502	G	A	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr9	37754928	37754929	chr9:37754929:G:C	rs10114403	G	C	G	Sox2_MA0143.3	16	0	-	0	0	.
chr9	37788913	37788914	chr9:37788914:T:C	rs10814620	T	C	C	Sox2_MA0143.3	19	0	-	0	0	.
chr9	37862661	37862662	chr9:37862662:G:A	rs41278315	G	A	G	Sox2_MA0143.3	24	0	+	0	0	.
chr9	37903352	37903353	chr9:37903353:G:C	rs61002862	G	C	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr9	37941747	37941748	chr9:37941748:C:T	rs776016	C	T	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr9	37957231	37957232	chr9:37957232:A:G	rs7048063	A	G	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr9	38076279	38076280	chr9:38076280:A:T	rs150404000	A	T	A	Sox2_MA0143.3	-2	0	+	0	0	.
chr9	38084458	38084459	chr9:38084459:C:T	rs541708678	C	T	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr9	38087026	38087027	chr9:38087027:G:T	rs75483269	G	T	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr9	38089640	38089641	chr9:38089641:A:G	rs1928233	A	G	A	Sox2_MA0143.3	8	0	+	0	0	.
chr9	38103020	38103021	chr9:38103021:A:T	rs10973664	A	T	a	Sox2_MA0143.3	26	0	+	0	0	.
chr9	38126849	38126850	chr9:38126850:A:G	rs146932518	A	G	A	Sox2_MA0143.3	25	0	-	0	0	.
chr9	38141785	38141786	chr9:38141786:G:C	rs562204774	G	C	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr9	38165818	38165819	chr9:38165819:C:A	rs2053551	C	A	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr9	38172923	38172924	chr9:38172924:T:A	rs12235833	T	A	T	Sox2_MA0143.3	-18	0	+	0	0	.
chr9	38209249	38209250	chr9:38209250:C:T	rs2810729	C	T	C	Sox2_MA0143.3	25	0	+	0	0	.
chr9	38226650	38226651	chr9:38226651:G:A	rs9722355	G	A	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr9	38291386	38291387	chr9:38291387:G:T	rs62541074	G	T	G	Sox2_MA0143.3	7	1	-	9.206767037375712	3.5547341015215945	CCTTTGTC
chr9	38296264	38296265	chr9:38296265:A:G	rs10758485	A	G	A	Sox2_MA0143.3	-4	0	+	0	0	.
chr9	38297815	38297816	chr9:38297816:A:T	rs75909762	A	T	A	Sox2_MA0143.3	8	0	+	0	0	.
chr9	38331704	38331705	chr9:38331705:G:A	rs2104171	G	A	G	Sox2_MA0143.3	16	0	+	0	0	.
chr9	38334101	38334102	chr9:38334102:G:A	rs1033790	G	A	A	Sox2_MA0143.3	20	0	-	0	0	.
chr9	38335971	38335972	chr9:38335972:A:T	rs12552291	A	T	A	Sox2_MA0143.3	10	0	+	0	0	.
chr9	38339078	38339079	chr9:38339079:C:T	rs34042838	C	T	C	Sox2_MA0143.3	25	0	-	0	0	.
chr9	38339097	38339098	chr9:38339098:A:T	rs11791867	A	T	A	Sox2_MA0143.3	6	1	-	8.676919043985553	1.7681642646703326	CCATTGTG
chr9	38364426	38364427	chr9:38364427:G:A	rs10814683	G	A	G	Sox2_MA0143.3	11	0	+	0	0	.
chr9	38421845	38421846	chr9:38421846:T:C	rs376141713	T	C	T	Sox2_MA0143.3	17	0	-	0	0	.
chr9	38434582	38434583	chr9:38434583:G:A	rs2181140	G	A	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr9	38668072	38668073	chr9:38668073:G:A	rs12555495	G	A	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr9	38681763	38681764	chr9:38681764:T:C	rs16935519	T	C	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr9	38681787	38681788	chr9:38681788:C:T	rs117826918	C	T	C	Sox2_MA0143.3	14	0	+	0	0	.
chr9	38681795	38681796	chr9:38681796:T:C	rs34756986	T	C	T	Sox2_MA0143.3	22	0	+	0	0	.
chr9	38682830	38682831	chr9:38682831:C:T	rs35846164	C	T	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr9	39005127	39005128	chr9:39005128:A:G	rs113143321	A	G	A	Sox2_MA0143.3	-12	0	+	0	0	.
chr9	39009054	39009055	chr9:39009055:C:G	rs1464858116	C	G	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr9	39355620	39355621	chr9:39355621:C:T	rs182412916	C	T	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr9	39357556	39357557	chr9:39357557:G:A	rs74322602	G	A	G	Sox2_MA0143.3	-12	0	+	0	0	.
chr9	39550940	39550941	chr9:39550941:C:A	rs9411722	C	A	.	Sox2_MA0143.3	23	0	+	0	0	.
chr9	40874030	40874031	chr9:40874031:A:G	rs7868603	A	G	.	Sox2_MA0143.3	-5	0	+	0	0	.
chr9	40886195	40886196	chr9:40886196:G:T	rs11262471	G	T	.	Sox2_MA0143.3	-3	0	-	0	0	.
chr9	40908237	40908238	chr9:40908238:T:C	rs76925983	T	C	.	Sox2_MA0143.3	16	0	-	0	0	.
chr9	40915335	40915336	chr9:40915336:A:C	rs1172557581	A	C	.	Sox2_MA0143.3	-1	0	-	0	0	.
chr9	41019058	41019059	chr9:41019059:C:T	rs201638977	C	T	.	Sox2_MA0143.3	26	0	+	0	0	.
chr9	41045109	41045110	chr9:41045110:C:T	rs151177618	C	T	.	Sox2_MA0143.3	13	0	+	0	0	.
chr9	41100705	41100706	chr9:41100706:C:T	rs9413988	C	T	.	Sox2_MA0143.3	-8	0	-	0	0	.
chr9	41648618	41648619	chr9:41648619:C:T	rs1437390015	C	T	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr9	41790190	41790191	chr9:41790191:A:G	rs551535497	A	G	.	Sox2_MA0143.3	-18	0	-	0	0	.
chr9	42132992	42132993	chr9:42132993:G:A	rs28735064	G	A	g	Sox2_MA0143.3	-11	0	-	0	0	.
chr9	42338404	42338405	chr9:42338405:G:T	rs79473761	G	T	-	Sox2_MA0143.3	19	0	-	0	0	.
chr9	42338443	42338444	chr9:42338444:C:T	rs1208488231	C	T	-	Sox2_MA0143.3	-20	0	-	0	0	.
chr9	42340118	42340119	chr9:42340119:A:C	rs1250781120	A	C	-	Sox2_MA0143.3	17	0	+	0	0	.
chr9	42364609	42364610	chr9:42364610:G:C	rs77329798	G	C	g	Sox2_MA0143.3	-5	0	-	0	0	.
chr9	42364807	42364808	chr9:42364808:G:T	rs1173402213	G	T	G	Sox2_MA0143.3	26	0	-	0	0	.
chr9	42388413	42388414	chr9:42388414:A:G	rs71232671	A	G	-	Sox2_MA0143.3	-5	0	-	0	0	.
chr9	42743175	42743176	chr9:42743176:A:G	rs28611013	A	G	.	Sox2_MA0143.3	21	0	+	0	0	.
chr9	43387827	43387828	chr9:43387828:A:C	rs1336013023	A	C	.	Sox2_MA0143.3	-11	0	+	0	0	.
chr9	43387839	43387840	chr9:43387840:C:G	rs1299542480	C	G	.	Sox2_MA0143.3	1	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr9	61550790	61550791	chr9:61550791:A:G	rs187349745	A	G	.	Sox2_MA0143.3	-13	0	+	0	0	.
chr9	61672255	61672256	chr9:61672256:G:C	rs570463406	G	C	.	Sox2_MA0143.3	26	0	-	0	0	.
chr9	61672260	61672261	chr9:61672261:C:T	rs372603644	C	T	.	Sox2_MA0143.3	21	0	-	0	0	.
chr9	62823352	62823353	chr9:62823353:A:G	rs4929128	A	G	.	Sox2_MA0143.3	14	0	+	0	0	.
chr9	62904314	62904315	chr9:62904315:C:T	rs879720125	C	T	c	Sox2_MA0143.3	24	0	+	0	0	.
chr9	63819958	63819959	chr9:63819959:T:C	rs76015020	T	C	.	Sox2_MA0143.3	-16	0	-	0	0	.
chr9	64437997	64437998	chr9:64437998:T:A	rs373818045	T	A	T	Sox2_MA0143.3	16	0	+	0	0	.
chr9	64766793	64766794	chr9:64766794:G:T	rs866469835	G	T	.	Sox2_MA0143.3	-1	0	+	0	0	.
chr9	65386337	65386338	chr9:65386338:C:T	rs1489613717	C	T	.	Sox2_MA0143.3	-4	0	+	0	0	.
chr9	65390034	65390035	chr9:65390035:G:A	rs1196818776	G	A	.	Sox2_MA0143.3	17	0	-	0	0	.
chr9	65426755	65426756	chr9:65426756:C:G	rs1334129766	C	G	.	Sox2_MA0143.3	11	0	-	0	0	.
chr9	66069349	66069350	chr9:66069350:G:A	rs4929397	G	A	-	Sox2_MA0143.3	5	1	+	9.019595766176417	2.110840986861197	CCATTGTC
chr9	66752992	66752993	chr9:66752993:C:A	rs7874326	C	A	c	Sox2_MA0143.3	-9	0	+	0	0	.
chr9	66774901	66774902	chr9:66774902:C:T	rs11788872	C	T	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr9	66775062	66775063	chr9:66775063:A:G	rs3007580	A	G	A	Sox2_MA0143.3	21	0	-	0	0	.
chr9	68428095	68428096	chr9:68428096:C:T	rs77288601	C	T	C	Sox2_MA0143.3	14	0	+	0	0	.
chr9	68522315	68522316	chr9:68522316:C:T	rs10780999	C	T	T	Sox2_MA0143.3	21	0	-	0	0	.
chr9	68563430	68563431	chr9:68563431:A:G	rs17479202	A	G	A	Sox2_MA0143.3	-5	0	-	0	0	.
chr9	68982923	68982924	chr9:68982924:G:T	rs12378665	G	T	T	Sox2_MA0143.3	-5	0	-	0	0	.
chr9	69030312	69030313	chr9:69030313:G:A	rs13288595	G	A	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr9	69079342	69079343	chr9:69079343:A:G	rs7859021	A	G	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr9	69130156	69130157	chr9:69130157:A:G	rs7024062	A	G	G	Sox2_MA0143.3	13	0	+	0	0	.
chr9	69156022	69156023	chr9:69156023:G:A	rs11145488	G	A	G	Sox2_MA0143.3	7	1	+	8.676919043985553	3.3675628303222993	CCATTGTG
chr9	69174239	69174240	chr9:69174240:C:T	rs13301644	C	T	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr9	69186578	69186579	chr9:69186579:A:G	rs9314865	A	G	A	Sox2_MA0143.3	15	0	-	0	0	.
chr9	69197881	69197882	chr9:69197882:C:T	rs35266980	C	T	C	Sox2_MA0143.3	17	0	+	0	0	.
chr9	69198654	69198655	chr9:69198655:T:C	rs7043149	T	C	T	Sox2_MA0143.3	-3	0	+	0	0	.
chr9	69422152	69422153	chr9:69422153:A:T	rs11138569	A	T	A	Sox2_MA0143.3	8	0	-	0	0	.
chr9	69422643	69422644	chr9:69422644:G:A	rs140607567	G	A	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr9	69485652	69485653	chr9:69485653:C:T	rs1331977	C	T	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr9	69497232	69497233	chr9:69497233:A:G	rs4744570	A	G	G	Sox2_MA0143.3	6	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr9	69498584	69498585	chr9:69498585:A:G	rs10867672	A	G	A	Sox2_MA0143.3	-18	0	-	0	0	.
chr9	69753998	69753999	chr9:69753999:G:A	rs139243783	G	A	G	Sox2_MA0143.3	-9	0	+	0	0	.
chr9	69916913	69916914	chr9:69916914:C:A	rs57482063	C	A	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr9	70028386	70028387	chr9:70028387:T:C	rs4397475	T	C	C	Sox2_MA0143.3	6	1	+	9.206767037375712	2.298012258060492	CCTTTGTC
chr9	70030355	70030356	chr9:70030356:G:A	rs143390274	G	A	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr9	70054763	70054764	chr9:70054764:G:A	rs2975917	G	A	A	Sox2_MA0143.3	11	0	+	0	0	.
chr9	70081133	70081134	chr9:70081134:A:G	rs3015179	A	G	G	Sox2_MA0143.3	6	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr9	70081135	70081136	chr9:70081136:A:G	rs3015180	A	G	A	Sox2_MA0143.3	4	1	-	8.864090315184848	1.9553355358696274	CCTTTGTG
chr9	70291971	70291972	chr9:70291972:T:G	rs1180132	T	G	G	Sox2_MA0143.3	2	1	-	9.613475778572903	3.494828071296623	CCATTGTT
chr9	70399438	70399439	chr9:70399439:C:A	rs11142398	C	A	C	Sox2_MA0143.3	11	0	+	0	0	.
chr9	70480375	70480376	chr9:70480376:G:A	rs373977016	G	A	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr9	70495584	70495585	chr9:70495585:G:A	rs34112146	G	A	G	Sox2_MA0143.3	9	0	-	0	0	.
chr9	70537053	70537054	chr9:70537054:C:T	rs3739776	C	T	C	Sox2_MA0143.3	20	0	+	0	0	.
chr9	70562163	70562164	chr9:70562164:A:G	rs113120086	A	G	A	Sox2_MA0143.3	4	1	-	9.800647049772198	2.8918922704569785	CCTTTGTT
chr9	70569083	70569084	chr9:70569084:C:T	rs10868853	C	T	T	Sox2_MA0143.3	25	0	+	0	0	.
chr9	70695440	70695441	chr9:70695441:C:A	rs10118419	C	A	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr9	70697069	70697070	chr9:70697070:G:A	rs7031754	G	A	G	Sox2_MA0143.3	-2	0	+	0	0	.
chr9	70697200	70697201	chr9:70697201:T:G	rs4745025	T	G	G	Sox2_MA0143.3	21	0	-	0	0	.
chr9	70697212	70697213	chr9:70697213:C:A	rs7860377	C	A	C	Sox2_MA0143.3	9	0	-	0	0	.
chr9	70764992	70764993	chr9:70764993:C:T	rs1571330	C	T	C	Sox2_MA0143.3	24	0	-	0	0	.
chr9	70979347	70979348	chr9:70979348:G:A	rs2909296	G	A	G	Sox2_MA0143.3	13	0	-	0	0	.
chr9	71106993	71106994	chr9:71106994:G:A	rs35505257	G	A	G	Sox2_MA0143.3	16	0	-	0	0	.
chr9	71246056	71246057	chr9:71246057:A:G	rs7024634	A	G	A	Sox2_MA0143.3	14	0	-	0	0	.
chr9	71255043	71255044	chr9:71255044:C:T	rs11142756	C	T	C	Sox2_MA0143.3	22	0	-	0	0	.
chr9	71286742	71286743	chr9:71286743:C:T	rs11142781	C	T	T	Sox2_MA0143.3	21	0	+	0	0	.
chr9	71509281	71509282	chr9:71509282:C:T	rs116759181	C	T	C	Sox2_MA0143.3	19	0	-	0	0	.
chr9	71509312	71509313	chr9:71509313:T:A	rs4521827	T	A	A	Sox2_MA0143.3	-12	0	-	0	0	.
chr9	71685723	71685724	chr9:71685724:A:G	rs2310021	A	G	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr9	71721955	71721956	chr9:71721956:G:A	rs62546998	G	A	G	Sox2_MA0143.3	0	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr9	71761104	71761105	chr9:71761105:C:T	rs62544891	C	T	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr9	71768030	71768031	chr9:71768031:C:T	rs76123891	C	T	C	Sox2_MA0143.3	9	0	+	0	0	.
chr9	71817357	71817358	chr9:71817358:C:T	rs146477466	C	T	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr9	71830292	71830293	chr9:71830293:C:A	rs2871405	C	A	C	Sox2_MA0143.3	25	0	+	0	0	.
chr9	71911392	71911393	chr9:71911393:C:A	chr9:71911393:C:A	C	A	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr9	71911393	71911394	chr9:71911394:G:T	rs112278918	G	T	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr9	71911394	71911395	chr9:71911395:C:T	rs973108267	C	T	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr9	71985295	71985296	chr9:71985296:C:A	rs7046123	C	A	C	Sox2_MA0143.3	15	0	+	0	0	.
chr9	72315882	72315883	chr9:72315883:G:A	rs117633239	G	A	G	Sox2_MA0143.3	12	0	-	0	0	.
chr9	72364881	72364882	chr9:72364882:C:A	rs1455567897	C	A	C	Sox2_MA0143.3	18	0	+	0	0	.
chr9	72382906	72382907	chr9:72382907:A:G	rs911856	A	G	A	Sox2_MA0143.3	9	0	-	0	0	.
chr9	72533761	72533762	chr9:72533762:G:A	rs4305962	G	A	G	Sox2_MA0143.3	23	0	+	0	0	.
chr9	72727114	72727115	chr9:72727115:A:C	rs2256491	A	C	A	Sox2_MA0143.3	8	0	+	0	0	.
chr9	72754616	72754617	chr9:72754617:A:T	rs13285034	A	T	A	Sox2_MA0143.3	11	0	+	0	0	.
chr9	72844399	72844400	chr9:72844400:T:C	rs7027182	T	C	C	Sox2_MA0143.3	24	0	-	0	0	.
chr9	72918850	72918851	chr9:72918851:C:G	rs8187953	C	G	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr9	72925270	72925271	chr9:72925271:A:G	rs2161811	A	G	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr9	72937747	72937748	chr9:72937748:A:C	chr9:72937748:A:C	A	C	A	Sox2_MA0143.3	2	1	-	9.800647049772198	3.494828071296623	CCTTTGTT
chr9	72937758	72937759	chr9:72937759:T:C	rs8187898	T	C	T	Sox2_MA0143.3	-9	0	-	0	0	.
chr9	72977871	72977872	chr9:72977872:C:T	rs116866400	C	T	T	Sox2_MA0143.3	1	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr9	73104632	73104633	chr9:73104633:G:A	rs1342019	G	A	G	Sox2_MA0143.3	0	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr9	73135748	73135749	chr9:73135749:A:G	rs11788245	A	G	A	Sox2_MA0143.3	17	0	-	0	0	.
chr9	73411817	73411818	chr9:73411818:T:G	rs12006282	T	G	T	Sox2_MA0143.3	19	0	-	0	0	.
chr9	73431552	73431553	chr9:73431553:A:T	rs76815055	A	T	A	Sox2_MA0143.3	-17	0	+	0	0	.
chr9	73964667	73964668	chr9:73964668:C:T	rs11515738	C	T	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr9	73998988	73998989	chr9:73998989:C:T	rs58694575	C	T	c	Sox2_MA0143.3	23	0	-	0	0	.
chr9	74066764	74066765	chr9:74066765:G:T	rs3012839	G	T	t	Sox2_MA0143.3	-3	0	-	0	0	.
chr9	74126325	74126326	chr9:74126326:T:C	rs4745286	T	C	T	Sox2_MA0143.3	-4	0	+	0	0	.
chr9	74280205	74280206	chr9:74280206:G:T	rs75417420	G	T	G	Sox2_MA0143.3	10	0	+	0	0	.
chr9	74444139	74444140	chr9:74444140:A:T	rs11143983	A	T	A	Sox2_MA0143.3	20	0	-	0	0	.
chr9	74572863	74572864	chr9:74572864:C:T	rs17612183	C	T	c	Sox2_MA0143.3	16	0	-	0	0	.
chr9	74784816	74784817	chr9:74784817:A:G	rs75968280	A	G	A	Sox2_MA0143.3	27	0	-	0	0	.
chr9	74905893	74905894	chr9:74905894:G:C	rs13301821	G	C	G	Sox2_MA0143.3	11	0	-	0	0	.
chr9	74964908	74964909	chr9:74964909:T:C	rs75319496	T	C	T	Sox2_MA0143.3	3	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr9	75002253	75002254	chr9:75002254:T:A	rs552600392	T	A	T	Sox2_MA0143.3	7	1	+	9.800647049772198	3.5547341015215945	CCTTTGTT
chr9	75201598	75201599	chr9:75201599:A:C	rs17060967	A	C	G	Sox2_MA0143.3	24	0	-	0	0	.
chr9	75430199	75430200	chr9:75430200:A:G	rs549674	A	G	G	Sox2_MA0143.3	27	0	+	0	0	.
chr9	75468521	75468522	chr9:75468522:C:A	rs12380464	C	A	A	Sox2_MA0143.3	9	0	-	0	0	.
chr9	75531902	75531903	chr9:75531903:A:G	rs187479232	A	G	A	Sox2_MA0143.3	-8	0	-	0	0	.
chr9	75597649	75597650	chr9:75597650:G:A	rs10118286	G	A	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr9	75641858	75641859	chr9:75641859:G:A	rs8181223	G	A	A	Sox2_MA0143.3	19	0	+	0	0	.
chr9	75894497	75894498	chr9:75894498:C:T	rs2050833	C	T	T	Sox2_MA0143.3	8	0	+	0	0	.
chr9	75904269	75904270	chr9:75904270:C:A	rs940791353	C	A	C	Sox2_MA0143.3	0	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr9	75904288	75904289	chr9:75904289:A:C	rs139523119	A	C	A	Sox2_MA0143.3	19	0	+	0	0	.
chr9	75979660	75979661	chr9:75979661:G:C	rs4434679	G	C	G	Sox2_MA0143.3	-16	0	-	0	0	.
chr9	76116554	76116555	chr9:76116555:G:A	rs13290495	G	A	G	Sox2_MA0143.3	19	0	+	0	0	.
chr9	76176272	76176273	chr9:76176273:T:G	rs2377527	T	G	T	Sox2_MA0143.3	-19	0	+	0	0	.
chr9	76254664	76254665	chr9:76254665:G:A	rs2261722	G	A	G	Sox2_MA0143.3	-11	0	+	0	0	.
chr9	76365171	76365172	chr9:76365172:T:C	rs79253264	T	C	T	Sox2_MA0143.3	-18	0	+	0	0	.
chr9	76388599	76388600	chr9:76388600:C:G	rs10781358	C	G	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr9	76499467	76499468	chr9:76499468:T:C	rs512269	T	C	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr9	76574767	76574768	chr9:76574768:C:T	rs4495501	C	T	T	Sox2_MA0143.3	-4	0	+	0	0	.
chr9	76741758	76741759	chr9:76741759:T:C	rs11145035	T	C	T	Sox2_MA0143.3	6	1	+	9.206767037375712	2.298012258060492	CCTTTGTC
chr9	76756734	76756735	chr9:76756735:C:A	rs2039880	C	A	A	Sox2_MA0143.3	1	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr9	76868603	76868604	chr9:76868604:G:A	rs57874200	G	A	G	Sox2_MA0143.3	7	1	-	9.206767037375712	9.800647049772198	CCTTTGTC
chr9	76893526	76893527	chr9:76893527:G:A	rs116709052	G	A	G	Sox2_MA0143.3	0	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr9	76897792	76897793	chr9:76897793:T:C	rs34919927	T	C	T	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr9	76912562	76912563	chr9:76912563:C:A	rs1936290	C	A	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr9	76913135	76913136	chr9:76913136:C:T	chr9:76913136:C:T	C	T	C	Sox2_MA0143.3	11	0	-	0	0	.
chr9	77025731	77025732	chr9:77025732:A:G	rs74641246	A	G	A	Sox2_MA0143.3	-1	0	+	0	0	.
chr9	77393135	77393136	chr9:77393136:A:G	rs111945624	A	G	A	Sox2_MA0143.3	20	0	+	0	0	.
chr9	77515629	77515630	chr9:77515630:G:T	rs17195438	G	T	G	Sox2_MA0143.3	19	0	+	0	0	.
chr9	77770512	77770513	chr9:77770513:A:G	rs1177934134	A	G	A	Sox2_MA0143.3	12	0	+	0	0	.
chr9	77881266	77881267	chr9:77881267:A:G	rs1410564	A	G	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr9	77884927	77884928	chr9:77884928:G:A	rs78669606	G	A	G	Sox2_MA0143.3	15	0	+	0	0	.
chr9	77977464	77977465	chr9:77977465:A:G	rs76763610	A	G	A	Sox2_MA0143.3	-10	0	+	0	0	.
chr9	77977497	77977498	chr9:77977498:C:T	rs77576077	C	T	C	Sox2_MA0143.3	23	0	+	0	0	.
chr9	77977585	77977586	chr9:77977586:A:G	rs150957534	A	G	A	Sox2_MA0143.3	16	0	-	0	0	.
chr9	77977602	77977603	chr9:77977603:C:T	rs4745683	C	T	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr9	78253437	78253438	chr9:78253438:G:T	rs3824547	G	T	T	Sox2_MA0143.3	23	0	-	0	0	.
chr9	78306171	78306172	chr9:78306172:T:G	rs1537173	T	G	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr9	78572940	78572941	chr9:78572941:G:C	rs2938882	G	C	G	Sox2_MA0143.3	25	0	+	0	0	.
chr9	78668555	78668556	chr9:78668556:A:T	rs116417728	A	T	A	Sox2_MA0143.3	15	0	+	0	0	.
chr9	78707531	78707532	chr9:78707532:T:A	chr9:78707532:T:A	T	A	T	Sox2_MA0143.3	-17	0	+	0	0	.
chr9	78714725	78714726	chr9:78714726:C:T	rs368858071	C	T	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr9	78779420	78779421	chr9:78779421:G:T	rs7849146	G	T	T	Sox2_MA0143.3	-7	0	+	0	0	.
chr9	78821715	78821716	chr9:78821716:G:T	rs11137859	G	T	G	Sox2_MA0143.3	11	0	-	0	0	.
chr9	78932812	78932813	chr9:78932813:A:G	rs2118747	A	G	A	Sox2_MA0143.3	-8	0	-	0	0	.
chr9	78978891	78978892	chr9:78978892:C:T	rs147296185	C	T	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr9	79138466	79138467	chr9:79138467:A:C	rs140255187	A	C	A	Sox2_MA0143.3	14	0	+	0	0	.
chr9	79277882	79277883	chr9:79277883:G:A	rs939746494	G	A	G	Sox2_MA0143.3	-9	0	+	0	0	.
chr9	79277890	79277891	chr9:79277891:G:C	rs273444	G	C	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr9	79403643	79403644	chr9:79403644:A:G	rs4877494	A	G	A	Sox2_MA0143.3	3	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr9	79404607	79404608	chr9:79404608:T:C	rs13287322	T	C	T	Sox2_MA0143.3	20	0	+	0	0	.
chr9	79481278	79481279	chr9:79481279:A:G	rs10491791	A	G	G	Sox2_MA0143.3	26	0	+	0	0	.
chr9	79682974	79682975	chr9:79682975:A:C	rs114574743	A	C	A	Sox2_MA0143.3	-20	0	-	0	0	.
chr9	79770085	79770086	chr9:79770086:G:C	rs6559499	G	C	C	Sox2_MA0143.3	0	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr9	79980517	79980518	chr9:79980518:G:A	rs146409943	G	A	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr9	79980527	79980528	chr9:79980528:G:C	rs149007085	G	C	G	Sox2_MA0143.3	-16	0	-	0	0	.
chr9	79980533	79980534	chr9:79980534:C:T	rs143816304	C	T	C	Sox2_MA0143.3	0	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr9	80074294	80074295	chr9:80074295:C:A	rs2031851	C	A	C	Sox2_MA0143.3	11	0	-	0	0	.
chr9	80148087	80148088	chr9:80148088:A:C	rs73469244	A	C	A	Sox2_MA0143.3	-13	0	+	0	0	.
chr9	80426951	80426952	chr9:80426952:A:G	rs1109201	A	G	A	Sox2_MA0143.3	17	0	+	0	0	.
chr9	80455641	80455642	chr9:80455642:C:G	rs17083391	C	G	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr9	80492160	80492161	chr9:80492161:G:A	rs11138692	G	A	G	Sox2_MA0143.3	22	0	-	0	0	.
chr9	80492174	80492175	chr9:80492175:A:C	rs10867554	A	C	C	Sox2_MA0143.3	8	0	-	0	0	.
chr9	80606403	80606404	chr9:80606404:C:G	rs10867591	C	G	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr9	80691279	80691280	chr9:80691280:G:A	rs144404476	G	A	G	Sox2_MA0143.3	7	1	-	9.206767037375712	9.800647049772198	CCTTTGTC
chr9	80695174	80695175	chr9:80695175:A:G	rs6559579	A	G	A	Sox2_MA0143.3	-4	0	+	0	0	.
chr9	81000666	81000667	chr9:81000667:G:A	rs4877197	G	A	A	Sox2_MA0143.3	-20	0	-	0	0	.
chr9	81174325	81174326	chr9:81174326:T:C	rs10867703	T	C	T	Sox2_MA0143.3	3	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr9	81182520	81182521	chr9:81182521:A:G	rs11139057	A	G	A	Sox2_MA0143.3	-12	0	-	0	0	.
chr9	81255989	81255990	chr9:81255990:T:C	rs56012319	T	C	T	Sox2_MA0143.3	12	0	+	0	0	.
chr9	81266713	81266714	chr9:81266714:C:G	rs77308580	C	G	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr9	81293271	81293272	chr9:81293272:C:G	rs6559620	C	G	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr9	81304036	81304037	chr9:81304037:C:T	rs3897898	C	T	T	Sox2_MA0143.3	-15	0	-	0	0	.
chr9	81410421	81410422	chr9:81410422:T:A	rs12002169	T	A	T	Sox2_MA0143.3	-10	0	-	0	0	.
chr9	81558335	81558336	chr9:81558336:G:A	rs112829698	G	A	G	Sox2_MA0143.3	-3	0	-	0	0	.
chr9	81562547	81562548	chr9:81562548:T:A	rs11139314	T	A	T	Sox2_MA0143.3	19	0	-	0	0	.
chr9	81588445	81588446	chr9:81588446:G:A	rs1220572113	G	A	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr9	81647521	81647522	chr9:81647522:A:T	rs10780526	A	T	A	Sox2_MA0143.3	13	0	-	0	0	.
chr9	81650046	81650047	chr9:81650047:C:G	chr9:81650047:C:G	C	G	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr9	81666393	81666394	chr9:81666394:C:T	rs10119840	C	T	C	Sox2_MA0143.3	10	0	-	0	0	.
chr9	81666396	81666397	chr9:81666397:C:T	rs10119841	C	T	T	Sox2_MA0143.3	7	1	-	8.676919043985553	3.3675628303222993	CCATTGTG
chr9	81673700	81673701	chr9:81673701:C:T	rs34739928	C	T	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr9	81687119	81687120	chr9:81687120:G:A	rs541067990	G	A	G	Sox2_MA0143.3	17	0	-	0	0	.
chr9	81687894	81687895	chr9:81687895:G:A	rs114809856	G	A	g	Sox2_MA0143.3	11	0	-	0	0	.
chr9	81724424	81724425	chr9:81724425:C:T	rs770432020	C	T	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr9	81756719	81756720	chr9:81756720:A:G	rs34589526	A	G	A	Sox2_MA0143.3	-10	0	+	0	0	.
chr9	81759864	81759865	chr9:81759865:C:T	rs76706434	C	T	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr9	81766925	81766926	chr9:81766926:G:T	rs73647884	G	T	G	Sox2_MA0143.3	24	0	-	0	0	.
chr9	81833606	81833607	chr9:81833607:G:A	rs66571856	G	A	.	Sox2_MA0143.3	16	0	-	0	0	.
chr9	81840752	81840753	chr9:81840753:C:T	rs72735456	C	T	C	Sox2_MA0143.3	18	0	-	0	0	.
chr9	81840756	81840757	chr9:81840757:T:C	rs7874530	T	C	C	Sox2_MA0143.3	14	0	-	0	0	.
chr9	81855880	81855881	chr9:81855881:G:T	rs75341746	G	T	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr9	81855919	81855920	chr9:81855920:G:A	rs111230194	G	A	G	Sox2_MA0143.3	26	0	+	0	0	.
chr9	81999950	81999951	chr9:81999951:T:G	rs117483001	T	G	t	Sox2_MA0143.3	-16	0	+	0	0	.
chr9	82489671	82489672	chr9:82489672:C:G	rs113198258	C	G	C	Sox2_MA0143.3	11	0	+	0	0	.
chr9	82513767	82513768	chr9:82513768:G:A	rs147486210	G	A	G	Sox2_MA0143.3	9	0	+	0	0	.
chr9	82588376	82588377	chr9:82588377:A:G	chr9:82588377:A:G	A	G	A	Sox2_MA0143.3	-16	0	+	0	0	.
chr9	82588376	82588377	chr9:82588377:A:T	rs11139637	A	T	A	Sox2_MA0143.3	-16	0	+	0	0	.
chr9	83122963	83122964	chr9:83122964:G:T	rs112130022	G	T	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr9	83155176	83155177	chr9:83155177:G:T	rs79989067	G	T	A	Sox2_MA0143.3	-17	0	-	0	0	.
chr9	83196313	83196314	chr9:83196314:G:C	rs1359165	G	C	C	Sox2_MA0143.3	10	0	+	0	0	.
chr9	83219396	83219397	chr9:83219397:G:A	rs11139975	G	A	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr9	83293050	83293051	chr9:83293051:G:A	rs2889954	G	A	T	Sox2_MA0143.3	-16	0	-	0	0	.
chr9	83336997	83336998	chr9:83336998:C:G	rs150769436	C	G	C	Sox2_MA0143.3	10	0	+	0	0	.
chr9	83392189	83392190	chr9:83392190:A:G	rs10117284	A	G	G	Sox2_MA0143.3	18	0	+	0	0	.
chr9	83424496	83424497	chr9:83424497:C:A	rs575105950	C	A	C	Sox2_MA0143.3	21	0	-	0	0	.
chr9	83424533	83424534	chr9:83424534:C:T	rs12003254	C	T	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr9	83432624	83432625	chr9:83432625:G:A	rs118072334	G	A	G	Sox2_MA0143.3	1	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr9	83464082	83464083	chr9:83464083:A:C	rs4877777	A	C	A	Sox2_MA0143.3	13	0	-	0	0	.
chr9	83471684	83471685	chr9:83471685:C:T	rs7850633	C	T	C	Sox2_MA0143.3	8	0	-	0	0	.
chr9	83544307	83544308	chr9:83544308:G:T	rs141341531	G	T	G	Sox2_MA0143.3	-2	0	+	0	0	.
chr9	83660170	83660171	chr9:83660171:T:C	rs140228622	T	C	T	Sox2_MA0143.3	12	0	+	0	0	.
chr9	83924030	83924031	chr9:83924031:C:T	rs73463395	C	T	C	Sox2_MA0143.3	8	0	+	0	0	.
chr9	84102090	84102091	chr9:84102091:G:A	rs35664751	G	A	G	Sox2_MA0143.3	-3	0	+	0	0	.
chr9	84274728	84274729	chr9:84274729:G:A	rs12003423	G	A	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr9	84357525	84357526	chr9:84357526:T:C	rs147073960	T	C	T	Sox2_MA0143.3	15	0	-	0	0	.
chr9	84383059	84383060	chr9:84383060:C:T	rs111471716	C	T	C	Sox2_MA0143.3	16	0	+	0	0	.
chr9	84383062	84383063	chr9:84383063:C:G	rs77066820	C	G	C	Sox2_MA0143.3	19	0	+	0	0	.
chr9	84413820	84413821	chr9:84413821:C:T	rs149463880	C	T	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr9	84647741	84647742	chr9:84647742:G:A	rs72737635	G	A	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr9	84682065	84682066	chr9:84682066:C:T	rs72737657	C	T	C	Sox2_MA0143.3	27	0	-	0	0	.
chr9	84712315	84712316	chr9:84712316:G:A	rs117440652	G	A	G	Sox2_MA0143.3	7	1	+	8.676919043985553	3.3675628303222993	CCATTGTG
chr9	84786068	84786069	chr9:84786069:G:A	rs59199967	G	A	G	Sox2_MA0143.3	17	0	+	0	0	.
chr9	84794034	84794035	chr9:84794035:C:T	rs2799482	C	T	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr9	84794062	84794063	chr9:84794063:C:T	rs2799483	C	T	C	Sox2_MA0143.3	15	0	+	0	0	.
chr9	84967756	84967757	chr9:84967757:G:A	rs970423525	G	A	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr9	84992569	84992570	chr9:84992570:T:C	rs74679569	T	C	T	Sox2_MA0143.3	8	0	+	0	0	.
chr9	85119518	85119519	chr9:85119519:C:T	rs1931107	C	T	T	Sox2_MA0143.3	5	1	-	9.613475778572903	2.7047209992576837	CCATTGTT
chr9	85163638	85163639	chr9:85163639:G:T	rs760606113	G	T	g	Sox2_MA0143.3	-19	0	+	0	0	.
chr9	85163662	85163663	chr9:85163663:G:C	rs111488819	G	C	g	Sox2_MA0143.3	5	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr9	85508091	85508092	chr9:85508092:T:C	rs7870241	T	C	T	Sox2_MA0143.3	-6	0	+	0	0	.
chr9	86047217	86047218	chr9:86047218:C:T	rs10124002	C	T	T	Sox2_MA0143.3	9	0	-	0	0	.
chr9	86168336	86168337	chr9:86168337:G:T	rs10868390	G	T	G	Sox2_MA0143.3	9	0	-	0	0	.
chr9	86168358	86168359	chr9:86168359:A:C	rs68066795	A	C	A	Sox2_MA0143.3	-13	0	-	0	0	.
chr9	86239189	86239190	chr9:86239190:G:T	rs10868400	G	T	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr9	86578266	86578267	chr9:86578267:G:A	rs79628351	G	A	G	Sox2_MA0143.3	13	0	+	0	0	.
chr9	86598743	86598744	chr9:86598744:C:T	rs7852670	C	T	T	Sox2_MA0143.3	19	0	+	0	0	.
chr9	86701977	86701978	chr9:86701978:A:G	rs10868471	A	G	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr9	86703226	86703227	chr9:86703227:C:T	rs7041400	C	T	T	Sox2_MA0143.3	-8	0	+	0	0	.
chr9	86828162	86828163	chr9:86828163:C:A	rs11141567	C	A	C	Sox2_MA0143.3	5	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr9	86891280	86891281	chr9:86891281:G:A	rs6559956	G	A	G	Sox2_MA0143.3	24	0	-	0	0	.
chr9	86977853	86977854	chr9:86977854:C:T	rs11141636	C	T	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr9	86977867	86977868	chr9:86977868:G:C	rs62564351	G	C	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr9	87120625	87120626	chr9:87120626:T:C	rs111396696	T	C	T	Sox2_MA0143.3	7	1	+	9.800647049772198	9.206767037375712	CCTTTGTT
chr9	87269041	87269042	chr9:87269042:A:C	rs79656609	A	C	A	Sox2_MA0143.3	18	0	-	0	0	.
chr9	87270616	87270617	chr9:87270617:G:C	rs62564882	G	C	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr9	87277771	87277772	chr9:87277772:A:G	rs1888925	A	G	G	Sox2_MA0143.3	17	0	-	0	0	.
chr9	87280761	87280762	chr9:87280762:T:C	rs9657729	T	C	T	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr9	87280894	87280895	chr9:87280895:C:T	rs1885784	C	T	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr9	87290349	87290350	chr9:87290350:G:A	rs10780821	G	A	A	Sox2_MA0143.3	9	0	-	0	0	.
chr9	87290361	87290362	chr9:87290362:A:G	rs118068344	A	G	A	Sox2_MA0143.3	-3	0	-	0	0	.
chr9	87324783	87324784	chr9:87324784:T:C	rs73652369	T	C	T	Sox2_MA0143.3	4	1	+	9.800647049772198	2.8918922704569785	CCTTTGTT
chr9	87337889	87337890	chr9:87337890:T:C	rs76180926	T	C	T	Sox2_MA0143.3	-19	0	+	0	0	.
chr9	87386744	87386745	chr9:87386745:C:A	rs17052804	C	A	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr9	87515364	87515365	chr9:87515365:T:C	rs36229266	T	C	T	Sox2_MA0143.3	19	0	-	0	0	.
chr9	87518757	87518758	chr9:87518758:G:A	rs1556	G	A	A	Sox2_MA0143.3	-18	0	-	0	0	.
chr9	87521330	87521331	chr9:87521331:G:A	rs1105384	G	A	G	Sox2_MA0143.3	20	0	+	0	0	.
chr9	87539805	87539806	chr9:87539806:C:T	rs374072633	C	T	C	Sox2_MA0143.3	18	0	+	0	0	.
chr9	87541930	87541931	chr9:87541931:C:T	rs1041326	C	T	C	Sox2_MA0143.3	11	0	+	0	0	.
chr9	87563014	87563015	chr9:87563015:A:G	rs10117924	A	G	A	Sox2_MA0143.3	-1	0	-	0	0	.
chr9	87563030	87563031	chr9:87563031:C:T	rs10780860	C	T	c	Sox2_MA0143.3	-17	0	-	0	0	.
chr9	87563938	87563939	chr9:87563939:C:T	rs147070602	C	T	C	Sox2_MA0143.3	24	0	-	0	0	.
chr9	87571795	87571796	chr9:87571796:C:G	rs4878103	C	G	C	Sox2_MA0143.3	11	0	-	0	0	.
chr9	87610274	87610275	chr9:87610275:T:C	rs1024883	T	C	T	Sox2_MA0143.3	-13	0	+	0	0	.
chr9	87660797	87660798	chr9:87660798:A:C	rs35630410	A	C	A	Sox2_MA0143.3	6	1	-	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr9	87660806	87660807	chr9:87660807:A:G	rs35311785	A	G	A	Sox2_MA0143.3	-3	0	-	0	0	.
chr9	87683615	87683616	chr9:87683616:C:A	rs2889982	C	A	C	Sox2_MA0143.3	23	0	+	0	0	.
chr9	87710614	87710615	chr9:87710615:G:A	rs11141951	G	A	G	Sox2_MA0143.3	24	0	-	0	0	.
chr9	87769301	87769302	chr9:87769302:T:G	rs9410954	T	G	T	Sox2_MA0143.3	-18	0	+	0	0	.
chr9	87773623	87773624	chr9:87773624:T:A	rs10735592	T	A	T	Sox2_MA0143.3	-20	0	-	0	0	.
chr9	87826477	87826478	chr9:87826478:G:A	rs7025820	G	A	G	Sox2_MA0143.3	23	0	-	0	0	.
chr9	87855675	87855676	chr9:87855676:A:G	rs3900998	A	G	-	Sox2_MA0143.3	3	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr9	87879171	87879172	chr9:87879172:A:G	rs113634613	A	G	-	Sox2_MA0143.3	-9	0	+	0	0	.
chr9	87880196	87880197	chr9:87880197:G:C	rs7031418	G	C	-	Sox2_MA0143.3	-9	0	-	0	0	.
chr9	87888535	87888536	chr9:87888536:G:A	rs11142017	G	A	A	Sox2_MA0143.3	-9	0	-	0	0	.
chr9	88037519	88037520	chr9:88037520:A:G	rs11142054	A	G	.	Sox2_MA0143.3	27	0	-	0	0	.
chr9	88218954	88218955	chr9:88218955:C:T	rs192114045	C	T	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr9	88218955	88218956	chr9:88218956:A:G	rs2438400	A	G	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr9	88229147	88229148	chr9:88229148:C:G	rs17053979	C	G	C	Sox2_MA0143.3	-19	0	-	0	0	.
chr9	88234598	88234599	chr9:88234599:G:T	rs77604951	G	T	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr9	88241769	88241770	chr9:88241770:T:C	rs4628339	T	C	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr9	88252131	88252132	chr9:88252132:A:G	rs7027888	A	G	-	Sox2_MA0143.3	-20	0	-	0	0	.
chr9	88270621	88270622	chr9:88270622:A:G	rs115581199	A	G	a	Sox2_MA0143.3	-11	0	+	0	0	.
chr9	88281378	88281379	chr9:88281379:T:C	rs28528206	T	C	T	Sox2_MA0143.3	-1	0	-	0	0	.
chr9	88312290	88312291	chr9:88312291:G:A	rs10868754	G	A	A	Sox2_MA0143.3	-9	0	-	0	0	.
chr9	88314134	88314135	chr9:88314135:C:T	rs112037793	C	T	C	Sox2_MA0143.3	11	0	+	0	0	.
chr9	88344893	88344894	chr9:88344894:A:G	rs75085233	A	G	a	Sox2_MA0143.3	-5	0	+	0	0	.
chr9	88388082	88388083	chr9:88388083:G:A	rs28365849	G	A	G	Sox2_MA0143.3	8	0	-	0	0	.
chr9	88544476	88544477	chr9:88544477:G:A	rs62000369	G	A	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr9	88618485	88618486	chr9:88618486:C:T	rs4351497	C	T	t	Sox2_MA0143.3	-6	0	-	0	0	.
chr9	88682834	88682835	chr9:88682835:A:G	rs9410468	A	G	A	Sox2_MA0143.3	-16	0	-	0	0	.
chr9	88721348	88721349	chr9:88721349:C:T	rs28589696	C	T	T	Sox2_MA0143.3	-7	0	-	0	0	.
chr9	88739013	88739014	chr9:88739014:T:C	rs56182958	T	C	T	Sox2_MA0143.3	4	1	+	8.676919043985553	1.7681642646703322	CCATTGTG
chr9	88747716	88747717	chr9:88747717:G:A	rs28619961	G	A	G	Sox2_MA0143.3	18	0	-	0	0	.
chr9	88747927	88747928	chr9:88747928:C:T	rs7869563	C	T	T	Sox2_MA0143.3	17	0	-	0	0	.
chr9	88747937	88747938	chr9:88747938:C:T	rs34254749	C	T	C	Sox2_MA0143.3	7	1	-	8.864090315184848	3.5547341015215945	CCTTTGTG
chr9	88747940	88747941	chr9:88747941:A:G	rs73652609	A	G	A	Sox2_MA0143.3	4	1	-	8.864090315184848	1.9553355358696274	CCTTTGTG
chr9	88765158	88765159	chr9:88765159:G:A	chr9:88765159:G:A	G	A	G	Sox2_MA0143.3	23	0	-	0	0	.
chr9	88786144	88786145	chr9:88786145:C:A	rs62550971	C	A	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr9	88808695	88808696	chr9:88808696:T:G	rs2653814	T	G	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr9	88935384	88935385	chr9:88935385:G:A	rs114472707	G	A	G	Sox2_MA0143.3	25	0	+	0	0	.
chr9	88947395	88947396	chr9:88947396:G:A	rs9410425	G	A	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr9	88949104	88949105	chr9:88949105:G:C	rs13300763	G	C	G	Sox2_MA0143.3	12	0	+	0	0	.
chr9	88950839	88950840	chr9:88950840:A:C	rs7024847	A	C	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr9	88950857	88950858	chr9:88950858:C:G	rs149867040	C	G	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr9	88950875	88950876	chr9:88950876:T:C	chr9:88950876:T:C	T	C	T	Sox2_MA0143.3	16	0	+	0	0	.
chr9	88987337	88987338	chr9:88987338:G:C	rs73496024	G	C	G	Sox2_MA0143.3	12	0	-	0	0	.
chr9	89070389	89070390	chr9:89070390:A:T	rs7860624	A	T	A	Sox2_MA0143.3	-3	0	+	0	0	.
chr9	89205915	89205916	chr9:89205916:A:G	rs73500168	A	G	A	Sox2_MA0143.3	-11	0	-	0	0	.
chr9	89286631	89286632	chr9:89286632:A:G	rs7024829	A	G	G	Sox2_MA0143.3	2	1	-	3.5547341015215945	-2.751084876953981	CCTTTGTA
chr9	89311550	89311551	chr9:89311551:C:T	rs778760971	C	T	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr9	89312470	89312471	chr9:89312471:C:G	rs3211672	C	G	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr9	89485030	89485031	chr9:89485031:A:T	rs13289929	A	T	A	Sox2_MA0143.3	-20	0	+	0	0	.
chr9	89507044	89507045	chr9:89507045:G:C	rs111548752	G	C	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr9	89530082	89530083	chr9:89530083:G:A	rs2988066	G	A	A	Sox2_MA0143.3	20	0	+	0	0	.
chr9	89533923	89533924	chr9:89533924:C:A	rs140506604	C	A	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr9	89574597	89574598	chr9:89574598:A:C	rs7030895	A	C	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr9	89602453	89602454	chr9:89602454:C:G	rs10124184	C	G	C	Sox2_MA0143.3	10	0	+	0	0	.
chr9	89602464	89602465	chr9:89602465:C:A	rs3763668	C	A	C	Sox2_MA0143.3	21	0	+	0	0	.
chr9	89607004	89607005	chr9:89607005:G:C	rs948873977	G	C	G	Sox2_MA0143.3	27	0	+	0	0	.
chr9	89613595	89613596	chr9:89613596:A:C	rs4877109	A	C	A	Sox2_MA0143.3	15	0	-	0	0	.
chr9	89640393	89640394	chr9:89640394:C:T	rs78976968	C	T	A	Sox2_MA0143.3	22	0	+	0	0	.
chr9	89678172	89678173	chr9:89678173:A:C	rs183285134	A	C	A	Sox2_MA0143.3	-4	0	-	0	0	.
chr9	89678178	89678179	chr9:89678179:C:T	rs72752909	C	T	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr9	89690521	89690522	chr9:89690522:T:C	rs79563310	T	C	T	Sox2_MA0143.3	6	1	+	9.019595766176417	2.110840986861197	CCATTGTC
chr9	89700427	89700428	chr9:89700428:A:G	rs10908917	A	G	G	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr9	89701557	89701558	chr9:89701558:T:A	rs114602700	T	A	T	Sox2_MA0143.3	13	0	-	0	0	.
chr9	89701587	89701588	chr9:89701588:C:T	rs192817121	C	T	c	Sox2_MA0143.3	-17	0	-	0	0	.
chr9	89748005	89748006	chr9:89748006:G:A	rs9722568	G	A	G	Sox2_MA0143.3	25	0	-	0	0	.
chr9	89756932	89756933	chr9:89756933:C:T	rs35085547	C	T	T	Sox2_MA0143.3	24	0	-	0	0	.
chr9	89795365	89795366	chr9:89795366:C:G	rs76874661	C	G	c	Sox2_MA0143.3	9	0	-	0	0	.
chr9	89806491	89806492	chr9:89806492:C:T	rs138773773	C	T	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr9	89823506	89823507	chr9:89823507:C:T	rs10908951	C	T	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr9	89886398	89886399	chr9:89886399:A:T	rs916926094	A	T	A	Sox2_MA0143.3	17	0	+	0	0	.
chr9	89899398	89899399	chr9:89899399:A:T	rs36195959	A	T	T	Sox2_MA0143.3	-8	0	-	0	0	.
chr9	89945974	89945975	chr9:89945975:T:G	rs2196922	T	G	G	Sox2_MA0143.3	3	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr9	89986102	89986103	chr9:89986103:C:T	rs12685019	C	T	C	Sox2_MA0143.3	10	0	+	0	0	.
chr9	90092639	90092640	chr9:90092640:A:G	rs12685614	A	G	G	Sox2_MA0143.3	16	0	-	0	0	.
chr9	90267802	90267803	chr9:90267803:C:A	rs12345615	C	A	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr9	90420865	90420866	chr9:90420866:G:C	rs944904	G	C	C	Sox2_MA0143.3	18	0	+	0	0	.
chr9	90420872	90420873	chr9:90420873:C:G	rs4744416	C	G	G	Sox2_MA0143.3	25	0	+	0	0	.
chr9	90616948	90616949	chr9:90616949:G:A	rs77958061	G	A	.	Sox2_MA0143.3	-3	0	-	0	0	.
chr9	90638529	90638530	chr9:90638530:A:G	rs7026977	A	G	.	Sox2_MA0143.3	12	0	-	0	0	.
chr9	90729977	90729978	chr9:90729978:C:A	rs1172927	C	A	.	Sox2_MA0143.3	-1	0	+	0	0	.
chr9	90775054	90775055	chr9:90775055:T:C	rs10993684	T	C	.	Sox2_MA0143.3	-5	0	+	0	0	.
chr9	90823027	90823028	chr9:90823028:T:C	rs114206496	T	C	T	Sox2_MA0143.3	-7	0	-	0	0	.
chr9	90840371	90840372	chr9:90840372:C:T	rs140369985	C	T	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr9	90864326	90864327	chr9:90864327:C:T	rs36063880	C	T	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr9	90873084	90873085	chr9:90873085:G:C	rs10993740	G	C	G	Sox2_MA0143.3	16	0	-	0	0	.
chr9	90880318	90880319	chr9:90880319:A:G	rs72729076	A	G	A	Sox2_MA0143.3	15	0	-	0	0	.
chr9	90889623	90889624	chr9:90889624:G:A	rs3789909	G	A	G	Sox2_MA0143.3	13	0	-	0	0	.
chr9	90898115	90898116	chr9:90898116:T:G	rs117866558	T	G	T	Sox2_MA0143.3	23	0	-	0	0	.
chr9	90904911	90904912	chr9:90904912:G:A	rs10993756	G	A	G	Sox2_MA0143.3	27	0	-	0	0	.
chr9	90919519	90919520	chr9:90919520:C:A	rs291756	C	A	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr9	91044518	91044519	chr9:91044519:A:G	rs16907110	A	G	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr9	91077940	91077941	chr9:91077941:C:T	rs551780099	C	T	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr9	91078555	91078556	chr9:91078556:T:A	rs7851847	T	A	T	Sox2_MA0143.3	10	0	+	0	0	.
chr9	91157085	91157086	chr9:91157086:T:A	rs12340288	T	A	T	Sox2_MA0143.3	16	0	-	0	0	.
chr9	91178107	91178108	chr9:91178108:T:C	rs2478963	T	C	T	Sox2_MA0143.3	-8	0	+	0	0	.
chr9	91198057	91198058	chr9:91198058:T:G	rs78049217	T	G	T	Sox2_MA0143.3	-10	0	-	0	0	.
chr9	91245341	91245342	chr9:91245342:A:G	rs77800109	A	G	A	Sox2_MA0143.3	-6	0	-	0	0	.
chr9	91375123	91375124	chr9:91375124:G:A	rs191542070	G	A	G	Sox2_MA0143.3	23	0	+	0	0	.
chr9	91376538	91376539	chr9:91376539:C:T	rs2440587	C	T	C	Sox2_MA0143.3	12	0	+	0	0	.
chr9	91417958	91417959	chr9:91417959:G:A	rs2482358	G	A	G	Sox2_MA0143.3	0	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr9	91421080	91421081	chr9:91421081:T:C	rs138701854	T	C	T	Sox2_MA0143.3	20	0	-	0	0	.
chr9	91428208	91428209	chr9:91428209:T:C	rs774228	T	C	T	Sox2_MA0143.3	2	1	+	9.800647049772198	3.494828071296623	CCTTTGTT
chr9	91497527	91497528	chr9:91497528:T:C	rs1332376	T	C	C	Sox2_MA0143.3	4	1	+	8.676919043985553	1.7681642646703322	CCATTGTG
chr9	91572233	91572234	chr9:91572234:C:A	rs542819202	C	A	C	Sox2_MA0143.3	-20	0	+	0	0	.
chr9	91625594	91625595	chr9:91625595:T:G	rs10820885	T	G	T	Sox2_MA0143.3	4	1	+	8.864090315184848	1.9553355358696274	CCTTTGTG
chr9	91721515	91721516	chr9:91721516:C:T	rs10992059	C	T	T	Sox2_MA0143.3	11	0	+	0	0	.
chr9	91817796	91817797	chr9:91817797:A:T	rs188418660	A	T	A	Sox2_MA0143.3	18	0	-	0	0	.
chr9	91846115	91846116	chr9:91846116:C:T	rs35783050	C	T	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr9	91856820	91856821	chr9:91856821:G:A	rs10992137	G	A	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr9	91885312	91885313	chr9:91885313:G:C	rs1049426781	G	C	G	Sox2_MA0143.3	24	0	+	0	0	.
chr9	91911098	91911099	chr9:91911099:G:A	rs76784905	G	A	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr9	91930489	91930490	chr9:91930490:A:G	rs7033397	A	G	G	Sox2_MA0143.3	9	0	+	0	0	.
chr9	91950408	91950409	chr9:91950409:C:T	rs748270510	C	T	C	Sox2_MA0143.3	15	0	-	0	0	.
chr9	92070281	92070282	chr9:92070282:G:C	rs10117143	G	C	G	Sox2_MA0143.3	12	0	+	0	0	.
chr9	92075549	92075550	chr9:92075550:C:A	rs11533009	C	A	c	Sox2_MA0143.3	-19	0	+	0	0	.
chr9	92165734	92165735	chr9:92165735:C:T	rs77983264	C	T	c	Sox2_MA0143.3	15	0	+	0	0	.
chr9	92245075	92245076	chr9:92245076:G:A	chr9:92245076:G:A	G	A	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr9	92353510	92353511	chr9:92353511:T:A	rs149820378	T	A	T	Sox2_MA0143.3	-13	0	+	0	0	.
chr9	92407114	92407115	chr9:92407115:C:T	rs117516582	C	T	C	Sox2_MA0143.3	27	0	+	0	0	.
chr9	92517305	92517306	chr9:92517306:A:G	rs2296668	A	G	G	Sox2_MA0143.3	23	0	+	0	0	.
chr9	92528551	92528552	chr9:92528552:G:A	rs62572509	G	A	A	Sox2_MA0143.3	-11	0	-	0	0	.
chr9	92637582	92637583	chr9:92637583:T:C	rs7864757	T	C	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr9	92637595	92637596	chr9:92637596:G:C	rs7875050	G	C	G	Sox2_MA0143.3	11	0	+	0	0	.
chr9	92641965	92641966	chr9:92641966:T:C	rs62574675	T	C	T	Sox2_MA0143.3	-9	0	-	0	0	.
chr9	92642205	92642206	chr9:92642206:C:G	rs118072634	C	G	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr9	92648776	92648777	chr9:92648777:G:T	rs7869521	G	T	G	Sox2_MA0143.3	0	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr9	92691597	92691598	chr9:92691598:T:C	rs72756476	T	C	T	Sox2_MA0143.3	-17	0	+	0	0	.
chr9	92704828	92704829	chr9:92704829:A:G	rs10992427	A	G	G	Sox2_MA0143.3	-11	0	+	0	0	.
chr9	92740660	92740661	chr9:92740661:T:C	rs976320	T	C	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr9	92793656	92793657	chr9:92793657:T:G	rs7868651	T	G	N	Sox2_MA0143.3	10	0	-	0	0	.
chr9	92801000	92801001	chr9:92801001:C:T	rs75406669	C	T	c	Sox2_MA0143.3	18	0	-	0	0	.
chr9	92882737	92882738	chr9:92882738:A:C	rs2296060	A	C	A	Sox2_MA0143.3	-9	0	+	0	0	.
chr9	93021005	93021006	chr9:93021006:A:G	rs117639572	A	G	A	Sox2_MA0143.3	6	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr9	93097386	93097387	chr9:93097387:C:T	chr9:93097387:C:T	C	T	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr9	93184502	93184503	chr9:93184503:C:T	rs995861252	C	T	C	Sox2_MA0143.3	14	0	+	0	0	.
chr9	93262511	93262512	chr9:93262512:T:C	rs7854000	T	C	C	Sox2_MA0143.3	16	0	+	0	0	.
chr9	93286487	93286488	chr9:93286488:T:A	rs10821105	T	A	T	Sox2_MA0143.3	21	0	-	0	0	.
chr9	93441473	93441474	chr9:93441474:C:T	rs111370527	C	T	C	Sox2_MA0143.3	18	0	-	0	0	.
chr9	93441495	93441496	chr9:93441496:A:G	rs78751849	A	G	G	Sox2_MA0143.3	-4	0	-	0	0	.
chr9	93468205	93468206	chr9:93468206:C:G	rs531975519	C	G	C	Sox2_MA0143.3	18	0	+	0	0	.
chr9	93505554	93505555	chr9:93505555:T:G	rs78665536	T	G	t	Sox2_MA0143.3	7	1	+	9.800647049772198	8.864090315184848	CCTTTGTT
chr9	93533820	93533821	chr9:93533821:C:A	rs4237221	C	A	A	Sox2_MA0143.3	19	0	+	0	0	.
chr9	93569561	93569562	chr9:93569562:T:G	rs7860098	T	G	G	Sox2_MA0143.3	4	1	+	9.206767037375712	2.2980122580604916	CCTTTGTC
chr9	93578634	93578635	chr9:93578635:C:G	rs143479815	C	G	C	Sox2_MA0143.3	9	0	+	0	0	.
chr9	93578650	93578651	chr9:93578651:C:T	rs117640468	C	T	C	Sox2_MA0143.3	25	0	+	0	0	.
chr9	93590836	93590837	chr9:93590837:G:T	rs2150752	G	T	T	Sox2_MA0143.3	-12	0	+	0	0	.
chr9	93599922	93599923	chr9:93599923:G:A	rs10992798	G	A	A	Sox2_MA0143.3	15	0	+	0	0	.
chr9	93599930	93599931	chr9:93599931:T:G	rs10739952	T	G	G	Sox2_MA0143.3	23	0	+	0	0	.
chr9	93620415	93620416	chr9:93620416:G:C	rs73522232	G	C	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr9	93621668	93621669	chr9:93621669:C:T	rs73522240	C	T	C	Sox2_MA0143.3	17	0	+	0	0	.
chr9	93635286	93635287	chr9:93635287:T:G	rs77133953	T	G	T	Sox2_MA0143.3	-10	0	+	0	0	.
chr9	93643581	93643582	chr9:93643582:T:A	rs6479499	T	A	A	Sox2_MA0143.3	-16	0	+	0	0	.
chr9	93659745	93659746	chr9:93659746:G:A	rs10992835	G	A	G	Sox2_MA0143.3	-11	0	+	0	0	.
chr9	93659767	93659768	chr9:93659768:G:A	rs75271573	G	A	G	Sox2_MA0143.3	11	0	+	0	0	.
chr9	93675339	93675340	chr9:93675340:G:A	rs77948146	G	A	G	Sox2_MA0143.3	10	0	+	0	0	.
chr9	93678332	93678333	chr9:93678333:C:T	rs115526324	C	T	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr9	93684729	93684730	chr9:93684730:C:T	rs7023609	C	T	T	Sox2_MA0143.3	-13	0	-	0	0	.
chr9	93814457	93814458	chr9:93814458:C:G	rs62575578	C	G	C	Sox2_MA0143.3	25	0	-	0	0	.
chr9	93899550	93899551	chr9:93899551:G:A	rs4523325	G	A	A	Sox2_MA0143.3	-6	0	+	0	0	.
chr9	93942351	93942352	chr9:93942352:A:G	rs2095778	A	G	G	Sox2_MA0143.3	25	0	+	0	0	.
chr9	94019054	94019055	chr9:94019055:G:A	rs118060944	G	A	G	Sox2_MA0143.3	-6	0	+	0	0	.
chr9	94140576	94140577	chr9:94140577:T:C	rs997642024	T	C	T	Sox2_MA0143.3	15	0	+	0	0	.
chr9	94225741	94225742	chr9:94225742:T:C	rs10821321	T	C	t	Sox2_MA0143.3	8	0	-	0	0	.
chr9	94225764	94225765	chr9:94225765:C:T	rs185583537	C	T	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr9	94325968	94325969	chr9:94325969:C:G	rs7875387	C	G	g	Sox2_MA0143.3	-20	0	-	0	0	.
chr9	94446034	94446035	chr9:94446035:T:C	rs7045712	T	C	T	Sox2_MA0143.3	20	0	+	0	0	.
chr9	94586461	94586462	chr9:94586462:A:C	rs79313303	A	C	C	Sox2_MA0143.3	14	0	-	0	0	.
chr9	94586469	94586470	chr9:94586470:A:G	rs1401441072	A	G	A	Sox2_MA0143.3	6	1	-	9.019595766176417	2.110840986861197	CCATTGTC
chr9	94653435	94653436	chr9:94653436:T:G	rs913183	T	G	G	Sox2_MA0143.3	-14	0	+	0	0	.
chr9	94665884	94665885	chr9:94665885:A:G	rs35414853	A	G	G	Sox2_MA0143.3	23	0	-	0	0	.
chr9	94720015	94720016	chr9:94720016:G:A	rs552821709	G	A	A	Sox2_MA0143.3	-19	0	+	0	0	.
chr9	94720039	94720040	chr9:94720040:G:C	rs77886262	G	C	G	Sox2_MA0143.3	5	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr9	94755149	94755150	chr9:94755150:C:T	rs183066	C	T	T	Sox2_MA0143.3	-20	0	+	0	0	.
chr9	94803178	94803179	chr9:94803179:T:C	rs356122	T	C	C	Sox2_MA0143.3	8	0	+	0	0	.
chr9	94869497	94869498	chr9:94869498:T:C	rs1274514849	T	C	T	Sox2_MA0143.3	-12	0	+	0	0	.
chr9	94869522	94869523	chr9:94869523:G:A	rs6479578	G	A	A	Sox2_MA0143.3	13	0	+	0	0	.
chr9	94870947	94870948	chr9:94870948:G:A	rs114222356	G	A	G	Sox2_MA0143.3	-2	0	+	0	0	.
chr9	94880670	94880671	chr9:94880671:T:C	rs894426	T	C	C	Sox2_MA0143.3	15	0	+	0	0	.
chr9	94907033	94907034	chr9:94907034:G:T	rs10821413	G	T	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr9	94993654	94993655	chr9:94993655:G:A	rs12682668	G	A	G	Sox2_MA0143.3	12	0	+	0	0	.
chr9	95024346	95024347	chr9:95024347:T:C	rs4743977	T	C	C	Sox2_MA0143.3	17	0	+	0	0	.
chr9	95041767	95041768	chr9:95041768:C:T	rs116317504	C	T	C	Sox2_MA0143.3	17	0	+	0	0	.
chr9	95058722	95058723	chr9:95058723:A:C	rs1245472303	A	C	A	Sox2_MA0143.3	-16	0	-	0	0	.
chr9	95065594	95065595	chr9:95065595:A:T	rs78794060	A	T	A	Sox2_MA0143.3	12	0	+	0	0	.
chr9	95090728	95090729	chr9:95090729:T:C	rs10761375	T	C	T	Sox2_MA0143.3	13	0	-	0	0	.
chr9	95090740	95090741	chr9:95090741:G:A	rs118150117	G	A	G	Sox2_MA0143.3	1	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr9	95090952	95090953	chr9:95090953:C:T	rs7863582	C	T	C	Sox2_MA0143.3	26	0	-	0	0	.
chr9	95092629	95092630	chr9:95092630:C:T	rs144866474	C	T	C	Sox2_MA0143.3	17	0	+	0	0	.
chr9	95150793	95150794	chr9:95150794:C:G	rs4647497	C	G	C	Sox2_MA0143.3	15	0	+	0	0	.
chr9	95167983	95167984	chr9:95167984:G:C	rs73532167	G	C	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr9	95226924	95226925	chr9:95226925:C:T	rs12380720	C	T	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr9	95338291	95338292	chr9:95338292:T:C	rs10821459	T	C	T	Sox2_MA0143.3	22	0	-	0	0	.
chr9	95434938	95434939	chr9:95434939:G:A	rs76714821	G	A	G	Sox2_MA0143.3	1	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr9	95464024	95464025	chr9:95464025:C:T	rs28493225	C	T	C	Sox2_MA0143.3	16	0	-	0	0	.
chr9	95483691	95483692	chr9:95483692:A:G	rs17369383	A	G	A	Sox2_MA0143.3	15	0	+	0	0	.
chr9	95505463	95505464	chr9:95505464:T:G	rs28620668	T	G	G	Sox2_MA0143.3	3	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr9	95506244	95506245	chr9:95506245:C:T	chr9:95506245:C:T	C	T	C	Sox2_MA0143.3	15	0	+	0	0	.
chr9	95506248	95506249	chr9:95506249:G:C	chr9:95506249:G:C	G	C	G	Sox2_MA0143.3	19	0	+	0	0	.
chr9	95512294	95512295	chr9:95512295:T:G	rs901420984	T	G	T	Sox2_MA0143.3	2	1	-	9.019595766176417	2.900948058900136	CCATTGTC
chr9	95524542	95524543	chr9:95524543:C:T	rs75490453	C	T	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr9	95545707	95545708	chr9:95545708:G:A	rs16909978	G	A	G	Sox2_MA0143.3	10	0	-	0	0	.
chr9	95609243	95609244	chr9:95609244:C:A	rs6478154	C	A	A	Sox2_MA0143.3	5	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr9	95644768	95644769	chr9:95644769:T:C	rs10990083	T	C	C	Sox2_MA0143.3	10	0	+	0	0	.
chr9	95736689	95736690	chr9:95736690:A:C	rs4743243	A	C	A	Sox2_MA0143.3	13	0	+	0	0	.
chr9	95747061	95747062	chr9:95747062:A:G	rs1093398	A	G	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr9	95806798	95806799	chr9:95806799:T:G	rs816675	T	G	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr9	96048304	96048305	chr9:96048305:A:G	rs533485347	A	G	A	Sox2_MA0143.3	-19	0	-	0	0	.
chr9	96098698	96098699	chr9:96098699:G:C	rs7041071	G	C	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr9	96112356	96112357	chr9:96112357:A:G	rs10819882	A	G	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr9	96116598	96116599	chr9:96116599:A:G	rs72743974	A	G	A	Sox2_MA0143.3	12	0	+	0	0	.
chr9	96167122	96167123	chr9:96167123:C:T	rs141925348	C	T	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr9	96167137	96167138	chr9:96167138:C:T	rs28708711	C	T	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr9	96167967	96167968	chr9:96167968:A:G	rs9785234	A	G	A	Sox2_MA0143.3	-15	0	-	0	0	.
chr9	96207463	96207464	chr9:96207464:A:G	rs7869882	A	G	G	Sox2_MA0143.3	20	0	-	0	0	.
chr9	96226218	96226219	chr9:96226219:C:T	rs7875483	C	T	C	Sox2_MA0143.3	9	0	+	0	0	.
chr9	97145985	97145986	chr9:97145986:T:C	rs7041241	T	C	C	Sox2_MA0143.3	7	1	+	9.800647049772198	9.206767037375712	CCTTTGTT
chr9	97220487	97220488	chr9:97220488:A:C	rs10119245	A	C	A	Sox2_MA0143.3	16	0	-	0	0	.
chr9	97256633	97256634	chr9:97256634:A:G	rs72747776	A	G	A	Sox2_MA0143.3	-8	0	+	0	0	.
chr9	97382399	97382400	chr9:97382400:T:C	rs3747510	T	C	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr9	97391563	97391564	chr9:97391564:C:T	rs10817515	C	T	C	Sox2_MA0143.3	11	0	-	0	0	.
chr9	97419437	97419438	chr9:97419438:A:G	rs77088213	A	G	A	Sox2_MA0143.3	-5	0	+	0	0	.
chr9	97432123	97432124	chr9:97432124:T:C	rs2045732	T	C	C	Sox2_MA0143.3	-9	0	-	0	0	.
chr9	97464348	97464349	chr9:97464349:G:A	rs7020902	G	A	A	Sox2_MA0143.3	-4	0	+	0	0	.
chr9	97680523	97680524	chr9:97680524:T:C	rs2808667	T	C	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr9	97714931	97714932	chr9:97714932:C:T	rs2808679	C	T	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr9	97714959	97714960	chr9:97714960:G:A	rs73484405	G	A	G	Sox2_MA0143.3	25	0	+	0	0	.
chr9	97811837	97811838	chr9:97811838:T:C	rs7870795	T	C	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr9	97845214	97845215	chr9:97845215:A:G	rs6478437	A	G	A	Sox2_MA0143.3	-9	0	-	0	0	.
chr9	97851553	97851554	chr9:97851554:T:C	rs72753507	T	C	T	Sox2_MA0143.3	4	1	+	3.5547341015215945	-3.3540206777936254	CCTTTGTA
chr9	97877039	97877040	chr9:97877040:A:C	rs530472076	A	C	A	Sox2_MA0143.3	-8	0	-	0	0	.
chr9	98103515	98103516	chr9:98103516:A:C	rs7872652	A	C	C	Sox2_MA0143.3	26	0	+	0	0	.
chr9	98105725	98105726	chr9:98105726:C:T	rs187685388	C	T	C	Sox2_MA0143.3	14	0	-	0	0	.
chr9	98129616	98129617	chr9:98129617:G:C	rs117807485	G	C	G	Sox2_MA0143.3	10	0	+	0	0	.
chr9	98146331	98146332	chr9:98146332:G:T	rs77687240	G	T	G	Sox2_MA0143.3	26	0	+	0	0	.
chr9	98164250	98164251	chr9:98164251:T:C	rs16913411	T	C	T	Sox2_MA0143.3	12	0	-	0	0	.
chr9	98193283	98193284	chr9:98193284:G:T	rs78486797	G	T	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr9	98263961	98263962	chr9:98263962:A:C	rs73488791	A	C	A	Sox2_MA0143.3	10	0	+	0	0	.
chr9	98263971	98263972	chr9:98263972:C:T	rs78140607	C	T	C	Sox2_MA0143.3	20	0	+	0	0	.
chr9	98265812	98265813	chr9:98265813:C:T	rs10818699	C	T	T	Sox2_MA0143.3	5	1	-	9.019595766176417	2.110840986861197	CCATTGTC
chr9	98265819	98265820	chr9:98265820:C:T	rs146404502	C	T	C	Sox2_MA0143.3	-2	0	-	0	0	.
chr9	98299356	98299357	chr9:98299357:C:G	rs970388	C	G	G	Sox2_MA0143.3	10	0	-	0	0	.
chr9	98307479	98307480	chr9:98307480:C:T	rs10985808	C	T	C	Sox2_MA0143.3	-14	0	-	0	0	.
chr9	98308594	98308595	chr9:98308595:A:G	rs10985815	A	G	G	Sox2_MA0143.3	13	0	-	0	0	.
chr9	98381681	98381682	chr9:98381682:C:T	rs151279934	C	T	C	Sox2_MA0143.3	14	0	+	0	0	.
chr9	98430727	98430728	chr9:98430728:T:C	rs12336184	T	C	C	Sox2_MA0143.3	4	1	+	9.206767037375712	2.2980122580604916	CCTTTGTC
chr9	98460991	98460992	chr9:98460992:A:C	rs2779559	A	C	A	Sox2_MA0143.3	-7	0	-	0	0	.
chr9	98630197	98630198	chr9:98630198:G:C	rs1167771	G	C	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr9	98633892	98633893	chr9:98633893:C:T	rs6478789	C	T	C	Sox2_MA0143.3	27	0	+	0	0	.
chr9	98657890	98657891	chr9:98657891:G:A	rs148971931	G	A	G	Sox2_MA0143.3	5	1	+	9.206767037375712	2.298012258060492	CCTTTGTC
chr9	98848229	98848230	chr9:98848230:C:T	rs10121713	C	T	C	Sox2_MA0143.3	5	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr9	98848240	98848241	chr9:98848241:C:T	rs185528022	C	T	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr9	98848651	98848652	chr9:98848652:T:C	chr9:98848652:T:C	T	C	T	Sox2_MA0143.3	-5	0	-	0	0	.
chr9	98853237	98853238	chr9:98853238:T:C	rs111898806	T	C	T	Sox2_MA0143.3	-9	0	+	0	0	.
chr9	98943933	98943934	chr9:98943934:C:A	rs1024350860	C	A	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr9	98990201	98990202	chr9:98990202:G:A	rs1023249	G	A	A	Sox2_MA0143.3	-10	0	+	0	0	.
chr9	99013814	99013815	chr9:99013815:C:A	rs79652426	C	A	C	Sox2_MA0143.3	8	0	+	0	0	.
chr9	99013823	99013824	chr9:99013824:T:C	rs7034847	T	C	T	Sox2_MA0143.3	17	0	+	0	0	.
chr9	99056433	99056434	chr9:99056434:T:C	rs11788317	T	C	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr9	99058419	99058420	chr9:99058420:A:G	rs113912587	A	G	A	Sox2_MA0143.3	-1	0	-	0	0	.
chr9	99058435	99058436	chr9:99058436:T:G	rs11789439	T	G	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr9	99070159	99070160	chr9:99070160:G:A	rs1051105	G	A	G	Sox2_MA0143.3	13	0	-	0	0	.
chr9	99106288	99106289	chr9:99106289:G:A	rs10988705	G	A	G	Sox2_MA0143.3	16	0	-	0	0	.
chr9	99162710	99162711	chr9:99162711:G:C	rs367568	G	C	c	Sox2_MA0143.3	10	0	+	0	0	.
chr9	99167443	99167444	chr9:99167444:G:A	rs334367	G	A	G	Sox2_MA0143.3	-11	0	-	0	0	.
chr9	99170887	99170888	chr9:99170888:G:T	rs7022989	G	T	T	Sox2_MA0143.3	-2	0	+	0	0	.
chr9	99254370	99254371	chr9:99254371:G:A	rs77074474	G	A	C	Sox2_MA0143.3	20	0	-	0	0	.
chr9	99254370	99254371	chr9:99254371:G:C	chr9:99254371:G:C	G	C	C	Sox2_MA0143.3	20	0	-	0	0	.
chr9	99353381	99353382	chr9:99353382:G:A	rs323728	G	A	G	Sox2_MA0143.3	-17	0	-	0	0	.
chr9	99362784	99362785	chr9:99362785:A:T	rs2586563	A	T	A	Sox2_MA0143.3	16	0	-	0	0	.
chr9	99368475	99368476	chr9:99368476:T:G	rs1323470	T	G	T	Sox2_MA0143.3	2	1	+	9.206767037375712	2.900948058900136	CCTTTGTC
chr9	99378008	99378009	chr9:99378009:C:T	rs7856628	C	T	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr9	99555950	99555951	chr9:99555951:A:G	rs558365213	A	G	A	Sox2_MA0143.3	6	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr9	99819461	99819462	chr9:99819462:A:G	chr9:99819462:A:G	A	G	A	Sox2_MA0143.3	-1	0	-	0	0	.
chr9	99819465	99819466	chr9:99819466:G:A	rs967481282	G	A	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr9	99820499	99820500	chr9:99820500:G:A	rs375952594	G	A	G	Sox2_MA0143.3	17	0	-	0	0	.
chr9	100096029	100096030	chr9:100096030:A:G	chr9:100096030:A:G	A	G	A	Sox2_MA0143.3	-19	0	-	0	0	.
chr9	100196316	100196317	chr9:100196317:G:A	rs7020636	G	A	A	Sox2_MA0143.3	5	1	+	9.206767037375712	2.298012258060492	CCTTTGTC
chr9	100370648	100370649	chr9:100370649:T:C	rs993885542	T	C	T	Sox2_MA0143.3	-10	0	+	0	0	.
chr9	100475338	100475339	chr9:100475339:T:G	rs72735128	T	G	T	Sox2_MA0143.3	-3	0	-	0	0	.
chr9	100505786	100505787	chr9:100505787:C:T	rs117854150	C	T	C	Sox2_MA0143.3	12	0	+	0	0	.
chr9	100555072	100555073	chr9:100555073:T:G	rs62577585	T	G	T	Sox2_MA0143.3	19	0	+	0	0	.
chr9	100596177	100596178	chr9:100596178:A:G	rs13301089	A	G	G	Sox2_MA0143.3	25	0	-	0	0	.
chr9	100596203	100596204	chr9:100596204:G:T	rs79262312	G	T	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr9	100671869	100671870	chr9:100671870:A:G	rs62577640	A	G	A	Sox2_MA0143.3	-2	0	-	0	0	.
chr9	100724693	100724694	chr9:100724694:T:C	rs144306865	T	C	T	Sox2_MA0143.3	-10	0	+	0	0	.
chr9	100745529	100745530	chr9:100745530:G:A	rs10989240	G	A	-	Sox2_MA0143.3	-8	0	+	0	0	.
chr9	101031964	101031965	chr9:101031965:G:T	rs649414	G	T	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr9	101123544	101123545	chr9:101123545:T:C	rs4990718	T	C	C	Sox2_MA0143.3	6	1	+	8.676919043985553	1.7681642646703326	CCATTGTG
chr9	101127398	101127399	chr9:101127399:C:T	rs10989412	C	T	C	Sox2_MA0143.3	18	0	+	0	0	.
chr9	101187390	101187391	chr9:101187391:A:G	rs2771062	A	G	A	Sox2_MA0143.3	-5	0	-	0	0	.
chr9	101307202	101307203	chr9:101307203:G:A	rs62576948	G	A	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr9	101484206	101484207	chr9:101484207:G:A	rs7029708	G	A	G	Sox2_MA0143.3	8	0	-	0	0	.
chr9	101636410	101636411	chr9:101636411:C:G	rs72745360	C	G	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr9	101656200	101656201	chr9:101656201:T:G	rs12352862	T	G	G	Sox2_MA0143.3	9	0	-	0	0	.
chr9	101841713	101841714	chr9:101841714:A:G	rs570863568	A	G	A	Sox2_MA0143.3	-13	0	-	0	0	.
chr9	102066885	102066886	chr9:102066886:T:C	rs320297	T	C	C	Sox2_MA0143.3	26	0	+	0	0	.
chr9	102136075	102136076	chr9:102136076:C:A	rs10989864	C	A	c	Sox2_MA0143.3	-12	0	+	0	0	.
chr9	102368121	102368122	chr9:102368122:A:C	rs11788870	A	C	A	Sox2_MA0143.3	-20	0	+	0	0	.
chr9	102486686	102486687	chr9:102486687:A:G	rs4742845	A	G	A	Sox2_MA0143.3	-20	0	-	0	0	.
chr9	102768401	102768402	chr9:102768402:T:C	rs72740783	T	C	T	Sox2_MA0143.3	24	0	+	0	0	.
chr9	103023805	103023806	chr9:103023806:A:T	rs4593609	A	T	A	Sox2_MA0143.3	3	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr9	103331702	103331703	chr9:103331703:C:T	rs62577264	C	T	C	Sox2_MA0143.3	24	0	-	0	0	.
chr9	103331715	103331716	chr9:103331716:C:T	rs385114	C	T	T	Sox2_MA0143.3	11	0	-	0	0	.
chr9	103398296	103398297	chr9:103398297:C:T	rs144766879	C	T	C	Sox2_MA0143.3	18	0	-	0	0	.
chr9	103398326	103398327	chr9:103398327:G:A	rs78427955	G	A	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr9	103669463	103669464	chr9:103669464:T:C	chr9:103669464:T:C	T	C	T	Sox2_MA0143.3	2	1	-	8.676919043985553	2.5582713367092715	CCATTGTG
chr9	103790254	103790255	chr9:103790255:T:A	rs1821963	T	A	A	Sox2_MA0143.3	21	0	+	0	0	.
chr9	103853143	103853144	chr9:103853144:T:C	rs10990957	T	C	T	Sox2_MA0143.3	-18	0	-	0	0	.
chr9	103899979	103899980	chr9:103899980:A:G	rs10732401	A	G	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr9	103919947	103919948	chr9:103919948:A:G	rs13302856	A	G	A	Sox2_MA0143.3	-16	0	+	0	0	.
chr9	104075705	104075706	chr9:104075706:A:G	rs79259843	A	G	a	Sox2_MA0143.3	-20	0	+	0	0	.
chr9	104092676	104092677	chr9:104092677:C:T	rs1411103	C	T	T	Sox2_MA0143.3	5	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr9	104094409	104094410	chr9:104094410:T:G	rs10820599	T	G	G	Sox2_MA0143.3	-12	0	+	0	0	.
chr9	104094410	104094411	chr9:104094411:T:C	rs10820600	T	C	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr9	104135070	104135071	chr9:104135071:T:C	rs16923741	T	C	C	Sox2_MA0143.3	19	0	-	0	0	.
chr9	104227371	104227372	chr9:104227372:G:A	rs1507515	G	A	A	Sox2_MA0143.3	7	1	-	9.206767037375712	9.800647049772198	CCTTTGTC
chr9	104235053	104235054	chr9:104235054:C:A	rs147975468	C	A	-	Sox2_MA0143.3	-6	0	-	0	0	.
chr9	104235054	104235055	chr9:104235055:G:A	rs150298621	G	A	-	Sox2_MA0143.3	-7	0	-	0	0	.
chr9	104235064	104235065	chr9:104235065:G:A	rs137880980	G	A	-	Sox2_MA0143.3	-17	0	-	0	0	.
chr9	104316523	104316524	chr9:104316524:G:T	rs561822264	G	T	g	Sox2_MA0143.3	5	1	+	9.019595766176417	2.110840986861197	CCATTGTC
chr9	104532601	104532602	chr9:104532602:T:C	rs148855011	T	C	T	Sox2_MA0143.3	-8	0	+	0	0	.
chr9	104682786	104682787	chr9:104682787:G:A	rs528954558	G	A	G	Sox2_MA0143.3	12	0	-	0	0	.
chr9	104765548	104765549	chr9:104765549:T:C	rs12552611	T	C	T	Sox2_MA0143.3	8	0	-	0	0	.
chr9	104777070	104777071	chr9:104777071:T:C	rs2482430	T	C	C	Sox2_MA0143.3	6	1	+	9.019595766176417	2.110840986861197	CCATTGTC
chr9	104816247	104816248	chr9:104816248:T:C	rs34788556	T	C	T	Sox2_MA0143.3	-17	0	-	0	0	.
chr9	104830074	104830075	chr9:104830075:C:T	rs78548599	C	T	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr9	104830083	104830084	chr9:104830084:G:A	rs73663560	G	A	C	Sox2_MA0143.3	5	1	+	9.019595766176417	2.110840986861197	CCATTGTC
chr9	104834129	104834130	chr9:104834130:C:G	rs4149300	C	G	G	Sox2_MA0143.3	24	0	+	0	0	.
chr9	104839259	104839260	chr9:104839260:G:A	rs2472386	G	A	a	Sox2_MA0143.3	0	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr9	104875024	104875025	chr9:104875025:A:G	rs59237458	A	G	g	Sox2_MA0143.3	4	1	-	9.019595766176417	2.1108409868611964	CCATTGTC
chr9	104922137	104922138	chr9:104922138:T:C	rs10991413	T	C	T	Sox2_MA0143.3	6	1	+	9.613475778572903	2.7047209992576837	CCATTGTT
chr9	104923260	104923261	chr9:104923261:G:T	rs2516313	G	T	T	Sox2_MA0143.3	13	0	+	0	0	.
chr9	104929398	104929399	chr9:104929399:C:T	rs73506198	C	T	C	Sox2_MA0143.3	13	0	+	0	0	.
chr9	104953596	104953597	chr9:104953597:A:G	rs2472519	A	G	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr9	104993738	104993739	chr9:104993739:C:A	rs72736922	C	A	C	Sox2_MA0143.3	5	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr9	105205006	105205007	chr9:105205007:A:G	rs34328416	A	G	a	Sox2_MA0143.3	-4	0	+	0	0	.
chr9	105217031	105217032	chr9:105217032:C:T	rs372554	C	T	T	Sox2_MA0143.3	17	0	+	0	0	.
chr9	105342313	105342314	chr9:105342314:G:T	rs116694606	G	T	G	Sox2_MA0143.3	5	1	+	9.206767037375712	2.298012258060492	CCTTTGTC
chr9	105448699	105448700	chr9:105448700:A:C	rs79184666	A	C	A	Sox2_MA0143.3	-18	0	+	0	0	.
chr9	105448700	105448701	chr9:105448701:G:C	chr9:105448701:G:C	G	C	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr9	105448708	105448709	chr9:105448709:A:G	rs10820803	A	G	A	Sox2_MA0143.3	-9	0	+	0	0	.
chr9	105448744	105448745	chr9:105448745:C:G	rs536426890	C	G	C	Sox2_MA0143.3	27	0	+	0	0	.
chr9	105480557	105480558	chr9:105480558:C:G	rs2771044	C	G	C	Sox2_MA0143.3	-19	0	+	0	0	.
chr9	105554371	105554372	chr9:105554372:G:A	rs2768288	G	A	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr9	105554462	105554463	chr9:105554463:C:G	rs1808155	C	G	C	Sox2_MA0143.3	-13	0	-	0	0	.
chr9	105976512	105976513	chr9:105976513:C:T	rs73510104	C	T	C	Sox2_MA0143.3	1	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr9	105979511	105979512	chr9:105979512:T:G	rs16925090	T	G	T	Sox2_MA0143.3	-19	0	+	0	0	.
chr9	106643184	106643185	chr9:106643185:A:G	rs10978576	A	G	A	Sox2_MA0143.3	11	0	-	0	0	.
chr9	106693744	106693745	chr9:106693745:G:A	rs12339500	G	A	G	Sox2_MA0143.3	-16	0	-	0	0	.
chr9	106704513	106704514	chr9:106704514:A:C	rs79134656	A	C	C	Sox2_MA0143.3	17	0	-	0	0	.
chr9	106711505	106711506	chr9:106711506:C:T	rs10122952	C	T	C	Sox2_MA0143.3	-16	0	+	0	0	.
chr9	106858267	106858268	chr9:106858268:T:A	rs1040111323	T	A	T	Sox2_MA0143.3	-14	0	+	0	0	.
chr9	106887383	106887384	chr9:106887384:T:A	rs7854242	T	A	A	Sox2_MA0143.3	19	0	-	0	0	.
chr9	106890701	106890702	chr9:106890702:C:G	rs10978666	C	G	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr9	106913968	106913969	chr9:106913969:G:A	rs10816453	G	A	G	Sox2_MA0143.3	13	0	-	0	0	.
chr9	106921067	106921068	chr9:106921068:T:G	rs948180772	T	G	T	Sox2_MA0143.3	12	0	-	0	0	.
chr9	106921071	106921072	chr9:106921072:T:C	rs1046467585	T	C	T	Sox2_MA0143.3	8	0	-	0	0	.
chr9	106945996	106945997	chr9:106945997:G:T	rs79967190	G	T	G	Sox2_MA0143.3	-11	0	+	0	0	.
chr9	107049944	107049945	chr9:107049945:A:G	rs784790	A	G	G	Sox2_MA0143.3	16	0	-	0	0	.
chr9	107178648	107178649	chr9:107178649:A:G	rs1001440	A	G	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr9	107243379	107243380	chr9:107243380:T:C	rs10978766	T	C	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr9	107252595	107252596	chr9:107252596:C:G	rs112428207	C	G	C	Sox2_MA0143.3	20	0	-	0	0	.
chr9	107285703	107285704	chr9:107285704:A:G	rs73515717	A	G	G	Sox2_MA0143.3	24	0	+	0	0	.
chr9	107369115	107369116	chr9:107369116:C:A	rs1538985	C	A	A	Sox2_MA0143.3	7	1	+	9.206767037375712	3.5547341015215945	CCTTTGTC
chr9	107404331	107404332	chr9:107404332:T:G	rs58560378	T	G	T	Sox2_MA0143.3	22	0	-	0	0	.
chr9	107423665	107423666	chr9:107423666:A:G	rs13287696	A	G	A	Sox2_MA0143.3	-16	0	-	0	0	.
chr9	107489328	107489329	chr9:107489329:T:A	rs45531231	T	A	T	Sox2_MA0143.3	-9	0	+	0	0	.
chr9	107490117	107490118	chr9:107490118:C:T	rs115212381	C	T	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr9	107536648	107536649	chr9:107536649:A:G	rs55760189	A	G	G	Sox2_MA0143.3	6	1	-	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr9	107667826	107667827	chr9:107667827:G:A	rs7847530	G	A	G	Sox2_MA0143.3	27	0	+	0	0	.
chr9	107700038	107700039	chr9:107700039:T:C	rs12685971	T	C	T	Sox2_MA0143.3	16	0	-	0	0	.
chr9	107781048	107781049	chr9:107781049:G:T	rs10759258	G	T	T	Sox2_MA0143.3	16	0	+	0	0	.
chr9	107818451	107818452	chr9:107818452:T:C	rs10816577	T	C	T	Sox2_MA0143.3	2	1	+	8.864090315184848	2.5582713367092715	CCTTTGTG
chr9	107819769	107819770	chr9:107819770:C:T	rs138476039	C	T	C	Sox2_MA0143.3	27	0	-	0	0	.
chr9	108185711	108185712	chr9:108185712:C:T	rs10816641	C	T	C	Sox2_MA0143.3	24	0	-	0	0	.
chr9	108185742	108185743	chr9:108185743:C:G	rs864145	C	G	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr9	108213182	108213183	chr9:108213183:G:T	rs548698	G	T	G	Sox2_MA0143.3	21	0	+	0	0	.
chr9	108224726	108224727	chr9:108224727:C:T	rs117317449	C	T	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr9	108357115	108357116	chr9:108357116:G:C	rs1535623	G	C	C	Sox2_MA0143.3	0	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr9	108380889	108380890	chr9:108380890:G:A	rs10979333	G	A	A	Sox2_MA0143.3	26	0	+	0	0	.
chr9	108386184	108386185	chr9:108386185:T:C	rs76673792	T	C	T	Sox2_MA0143.3	-18	0	-	0	0	.
chr9	108445965	108445966	chr9:108445966:G:A	rs1332640383	G	A	G	Sox2_MA0143.3	13	0	-	0	0	.
chr9	108543363	108543364	chr9:108543364:G:C	rs118176995	G	C	G	Sox2_MA0143.3	-11	0	+	0	0	.
chr9	108543395	108543396	chr9:108543396:T:G	rs75885967	T	G	T	Sox2_MA0143.3	21	0	+	0	0	.
chr9	108543400	108543401	chr9:108543401:G:A	rs78545323	G	A	G	Sox2_MA0143.3	26	0	+	0	0	.
chr9	108543648	108543649	chr9:108543649:T:C	rs10816682	T	C	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr9	108545546	108545547	chr9:108545547:T:C	rs73517967	T	C	T	Sox2_MA0143.3	6	1	+	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr9	108586354	108586355	chr9:108586355:T:C	rs4978357	T	C	T	Sox2_MA0143.3	20	0	-	0	0	.
chr9	108591532	108591533	chr9:108591533:T:C	rs12005604	T	C	T	Sox2_MA0143.3	-6	0	+	0	0	.
chr9	108606201	108606202	chr9:108606202:T:C	rs959243	T	C	T	Sox2_MA0143.3	-13	0	+	0	0	.
chr9	108653454	108653455	chr9:108653455:G:C	rs7855370	G	C	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr9	108656926	108656927	chr9:108656927:T:G	rs28372166	T	G	T	Sox2_MA0143.3	-10	0	+	0	0	.
chr9	108665473	108665474	chr9:108665474:T:C	rs2417919	T	C	T	Sox2_MA0143.3	-16	0	-	0	0	.
chr9	108671452	108671453	chr9:108671453:T:G	chr9:108671453:T:G	T	G	T	Sox2_MA0143.3	-16	0	-	0	0	.
chr9	108708606	108708607	chr9:108708607:G:T	rs7028790	G	T	G	Sox2_MA0143.3	22	0	-	0	0	.
chr9	108708607	108708608	chr9:108708608:C:A	rs7028554	C	A	C	Sox2_MA0143.3	21	0	-	0	0	.
chr9	108844970	108844971	chr9:108844971:C:T	rs17801575	C	T	C	Sox2_MA0143.3	14	0	+	0	0	.
chr9	108890196	108890197	chr9:108890197:G:A	rs12344049	G	A	G	Sox2_MA0143.3	-10	0	-	0	0	.
chr9	108894408	108894409	chr9:108894409:A:T	rs10979595	A	T	a	Sox2_MA0143.3	16	0	-	0	0	.
chr9	108912083	108912084	chr9:108912084:G:T	rs7853801	G	T	G	Sox2_MA0143.3	9	0	-	0	0	.
chr9	109097265	109097266	chr9:109097266:A:G	rs72760367	A	G	G	Sox2_MA0143.3	20	0	-	0	0	.
chr9	109097280	109097281	chr9:109097281:C:T	rs72760370	C	T	C	Sox2_MA0143.3	5	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr9	109166312	109166313	chr9:109166313:A:G	rs2139350	A	G	A	Sox2_MA0143.3	-17	0	-	0	0	.
chr9	109312447	109312448	chr9:109312448:G:A	rs6477699	G	A	A	Sox2_MA0143.3	-6	0	-	0	0	.
chr9	109312452	109312453	chr9:109312453:T:C	rs6477700	T	C	T	Sox2_MA0143.3	-11	0	-	0	0	.
chr9	109313956	109313957	chr9:109313957:T:A	rs10120409	T	A	T	Sox2_MA0143.3	-9	0	+	0	0	.
chr9	109316267	109316268	chr9:109316268:A:G	rs28412870	A	G	A	Sox2_MA0143.3	3	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr9	109417130	109417131	chr9:109417131:T:C	rs7852990	T	C	T	Sox2_MA0143.3	-12	0	-	0	0	.
chr9	109449711	109449712	chr9:109449712:T:G	rs10979872	T	G	G	Sox2_MA0143.3	3	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr9	109481040	109481041	chr9:109481041:T:C	rs10512395	T	C	T	Sox2_MA0143.3	-6	0	-	0	0	.
chr9	109872449	109872450	chr9:109872450:T:C	rs10980105	T	C	T	Sox2_MA0143.3	16	0	-	0	0	.
chr9	109886231	109886232	chr9:109886232:C:T	rs189231285	C	T	C	Sox2_MA0143.3	8	0	+	0	0	.
chr9	109938029	109938030	chr9:109938030:A:T	rs7046825	A	T	T	Sox2_MA0143.3	-6	0	-	0	0	.
chr9	109969418	109969419	chr9:109969419:C:T	rs72754919	C	T	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr9	110027857	110027858	chr9:110027858:C:T	rs137893803	C	T	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr9	110144021	110144022	chr9:110144022:T:C	rs116204912	T	C	T	Sox2_MA0143.3	21	0	-	0	0	.
chr9	110214866	110214867	chr9:110214867:T:C	rs73539253	T	C	T	Sox2_MA0143.3	-15	0	+	0	0	.
chr9	110216017	110216018	chr9:110216018:A:G	rs7851800	A	G	A	Sox2_MA0143.3	-5	0	+	0	0	.
chr9	110218991	110218992	chr9:110218992:C:T	rs9299183	C	T	C	Sox2_MA0143.3	-16	0	-	0	0	.
chr9	110242837	110242838	chr9:110242838:T:G	rs12237768	T	G	T	Sox2_MA0143.3	-12	0	+	0	0	.
chr9	110252888	110252889	chr9:110252889:C:T	rs4135186	C	T	C	Sox2_MA0143.3	25	0	-	0	0	.
chr9	110254656	110254657	chr9:110254657:T:C	rs188860634	T	C	T	Sox2_MA0143.3	-15	0	+	0	0	.
chr9	110261581	110261582	chr9:110261582:A:G	rs72757062	A	G	G	Sox2_MA0143.3	-16	0	-	0	0	.
chr9	110537925	110537926	chr9:110537926:C:T	rs10759440	C	T	C	Sox2_MA0143.3	10	0	+	0	0	.
chr9	110580478	110580479	chr9:110580479:A:G	rs7866497	A	G	G	Sox2_MA0143.3	-2	0	+	0	0	.
chr9	110602148	110602149	chr9:110602149:A:G	rs12238782	A	G	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr9	110790538	110790539	chr9:110790539:G:T	rs150742766	G	T	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr9	110801406	110801407	chr9:110801407:C:T	rs78127863	C	T	C	Sox2_MA0143.3	21	0	+	0	0	.
chr9	110879502	110879503	chr9:110879503:T:A	rs1751242	T	A	T	Sox2_MA0143.3	15	0	-	0	0	.
chr9	110995064	110995065	chr9:110995065:T:C	rs145097368	T	C	T	Sox2_MA0143.3	-18	0	-	0	0	.
chr9	111000520	111000521	chr9:111000521:T:C	rs17467596	T	C	T	Sox2_MA0143.3	-3	0	-	0	0	.
chr9	111039912	111039913	chr9:111039913:T:A	rs10980704	T	A	T	Sox2_MA0143.3	-16	0	-	0	0	.
chr9	111041373	111041374	chr9:111041374:G:A	rs72753605	G	A	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr9	111196070	111196071	chr9:111196071:C:A	rs2039183	C	A	C	Sox2_MA0143.3	1	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr9	111224663	111224664	chr9:111224664:A:G	rs7852440	A	G	A	Sox2_MA0143.3	2	1	+	9.613475778572903	3.494828071296623	CCATTGTT
chr9	111301165	111301166	chr9:111301166:T:C	rs4978988	T	C	T	Sox2_MA0143.3	20	0	-	0	0	.
chr9	111400976	111400977	chr9:111400977:A:G	rs4978996	A	G	G	Sox2_MA0143.3	6	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr9	111421094	111421095	chr9:111421095:T:C	rs16916084	T	C	T	Sox2_MA0143.3	10	0	+	0	0	.
chr9	111636001	111636002	chr9:111636002:A:G	rs530576606	A	G	A	Sox2_MA0143.3	9	0	-	0	0	.
chr9	111712548	111712549	chr9:111712549:C:A	rs7048857	C	A	A	Sox2_MA0143.3	-15	0	-	0	0	.
chr9	111760540	111760541	chr9:111760541:G:A	rs10121514	G	A	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr9	111816039	111816040	chr9:111816040:A:G	rs440365	A	G	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr9	111821750	111821751	chr9:111821751:C:T	rs10981092	C	T	c	Sox2_MA0143.3	-3	0	-	0	0	.
chr9	111871493	111871494	chr9:111871494:A:G	rs315714	A	G	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr9	111902490	111902491	chr9:111902491:T:C	rs116931840	T	C	T	Sox2_MA0143.3	27	0	-	0	0	.
chr9	111922724	111922725	chr9:111922725:C:G	rs41279075	C	G	C	Sox2_MA0143.3	14	0	+	0	0	.
chr9	111959174	111959175	chr9:111959175:G:A	rs13299128	G	A	G	Sox2_MA0143.3	27	0	+	0	0	.
chr9	111960345	111960346	chr9:111960346:T:C	rs56782045	T	C	T	Sox2_MA0143.3	-6	0	-	0	0	.
chr9	112009910	112009911	chr9:112009911:T:C	rs10981204	T	C	T	Sox2_MA0143.3	11	0	-	0	0	.
chr9	112013570	112013571	chr9:112013571:G:A	rs76887446	G	A	G	Sox2_MA0143.3	1	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr9	112030166	112030167	chr9:112030167:C:T	rs575053836	C	T	C	Sox2_MA0143.3	20	0	+	0	0	.
chr9	112034993	112034994	chr9:112034994:T:C	rs79250954	T	C	T	Sox2_MA0143.3	15	0	+	0	0	.
chr9	112037917	112037918	chr9:112037918:T:C	rs558639630	T	C	T	Sox2_MA0143.3	22	0	-	0	0	.
chr9	112047821	112047822	chr9:112047822:A:G	rs10981228	A	G	A	Sox2_MA0143.3	17	0	+	0	0	.
chr9	112103624	112103625	chr9:112103625:T:C	rs9408837	T	C	T	Sox2_MA0143.3	-15	0	-	0	0	.
chr9	112116149	112116150	chr9:112116150:C:T	rs545459861	C	T	C	Sox2_MA0143.3	10	0	+	0	0	.
chr9	112207708	112207709	chr9:112207709:G:C	rs7861788	G	C	C	Sox2_MA0143.3	18	0	+	0	0	.
chr9	112207712	112207713	chr9:112207713:C:T	rs4644329	C	T	C	Sox2_MA0143.3	22	0	+	0	0	.
chr9	112326388	112326389	chr9:112326389:T:C	rs4542000	T	C	C	Sox2_MA0143.3	21	0	+	0	0	.
chr9	112378874	112378875	chr9:112378875:T:C	rs112246388	T	C	T	Sox2_MA0143.3	22	0	-	0	0	.
chr9	112378916	112378917	chr9:112378917:A:C	rs10115884	A	C	A	Sox2_MA0143.3	-20	0	-	0	0	.
chr9	112582583	112582584	chr9:112582584:G:A	rs2676620	G	A	g	Sox2_MA0143.3	20	0	-	0	0	.
chr9	112680789	112680790	chr9:112680790:G:A	rs75707134	G	A	g	Sox2_MA0143.3	-15	0	-	0	0	.
chr9	112744354	112744355	chr9:112744355:C:T	rs66992575	C	T	C	Sox2_MA0143.3	0	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr9	112771421	112771422	chr9:112771422:T:C	rs76200195	T	C	T	Sox2_MA0143.3	12	0	-	0	0	.
chr9	112831448	112831449	chr9:112831449:A:C	rs1539339	A	C	A	Sox2_MA0143.3	6	1	-	9.613475778572903	2.7047209992576837	CCATTGTT
chr9	112834460	112834461	chr9:112834461:C:T	rs76004238	C	T	C	Sox2_MA0143.3	5	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr9	112850548	112850549	chr9:112850549:T:G	rs9299212	T	G	T	Sox2_MA0143.3	19	0	-	0	0	.
chr9	112853048	112853049	chr9:112853049:G:A	rs10733598	G	A	A	Sox2_MA0143.3	25	0	-	0	0	.
chr9	112868962	112868963	chr9:112868963:T:C	rs142709062	T	C	T	Sox2_MA0143.3	4	1	+	8.864090315184848	1.9553355358696274	CCTTTGTG
chr9	113058238	113058239	chr9:113058239:G:A	rs72756132	G	A	g	Sox2_MA0143.3	-4	0	+	0	0	.
chr9	113269359	113269360	chr9:113269360:C:T	rs12337498	C	T	C	Sox2_MA0143.3	1	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr9	113274440	113274441	chr9:113274441:G:A	rs12337200	G	A	G	Sox2_MA0143.3	16	0	+	0	0	.
chr9	113340506	113340507	chr9:113340507:C:G	rs74621275	C	G	G	Sox2_MA0143.3	-11	0	+	0	0	.
chr9	113492267	113492268	chr9:113492268:A:T	rs7865642	A	T	A	Sox2_MA0143.3	-2	0	+	0	0	.
chr9	113505319	113505320	chr9:113505320:G:A	rs75626382	G	A	G	Sox2_MA0143.3	7	1	+	8.864090315184848	3.5547341015215945	CCTTTGTG
chr9	113505320	113505321	chr9:113505321:C:G	rs72761969	C	G	G	Sox2_MA0143.3	8	0	+	0	0	.
chr9	113568463	113568464	chr9:113568464:A:T	rs79537389	A	T	A	Sox2_MA0143.3	18	0	+	0	0	.
chr9	113587157	113587158	chr9:113587158:A:G	rs10981836	A	G	A	Sox2_MA0143.3	-9	0	+	0	0	.
chr9	113587178	113587179	chr9:113587179:C:T	rs12348214	C	T	C	Sox2_MA0143.3	12	0	+	0	0	.
chr9	113620407	113620408	chr9:113620408:C:T	rs502942	C	T	C	Sox2_MA0143.3	17	0	+	0	0	.
chr9	113663579	113663580	chr9:113663580:T:C	rs7854061	T	C	C	Sox2_MA0143.3	15	0	-	0	0	.
chr9	113948231	113948232	chr9:113948232:A:G	rs12551845	A	G	A	Sox2_MA0143.3	16	0	+	0	0	.
chr9	113948711	113948712	chr9:113948712:G:A	rs2900570	G	A	A	Sox2_MA0143.3	21	0	+	0	0	.
chr9	113960793	113960794	chr9:113960794:G:C	rs814693	G	C	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr9	113960814	113960815	chr9:113960815:A:G	rs814694	A	G	A	Sox2_MA0143.3	2	1	+	9.613475778572903	3.494828071296623	CCATTGTT
chr9	113986108	113986109	chr9:113986109:A:G	rs148054353	A	G	A	Sox2_MA0143.3	3	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr9	113990567	113990568	chr9:113990568:C:G	rs74671845	C	G	C	Sox2_MA0143.3	23	0	+	0	0	.
chr9	113999180	113999181	chr9:113999181:C:T	rs1000876379	C	T	C	Sox2_MA0143.3	-20	0	-	0	0	.
chr9	114003599	114003600	chr9:114003600:G:T	rs4979319	G	T	G	Sox2_MA0143.3	-20	0	-	0	0	.
chr9	114026007	114026008	chr9:114026008:T:C	rs557755834	T	C	T	Sox2_MA0143.3	17	0	+	0	0	.
chr9	114047867	114047868	chr9:114047868:C:T	rs114361201	C	T	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr9	114053496	114053497	chr9:114053497:C:T	rs3810928	C	T	C	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr9	114082451	114082452	chr9:114082452:T:A	rs74972533	T	A	T	Sox2_MA0143.3	26	0	-	0	0	.
chr9	114082463	114082464	chr9:114082464:G:T	rs898410130	G	T	G	Sox2_MA0143.3	14	0	-	0	0	.
chr9	114099590	114099591	chr9:114099591:A:C	rs115785757	A	C	A	Sox2_MA0143.3	-8	0	+	0	0	.
chr9	114211474	114211475	chr9:114211475:G:A	rs4979354	G	A	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr9	114240236	114240237	chr9:114240237:C:T	rs2014134	C	T	C	Sox2_MA0143.3	20	0	-	0	0	.
chr9	114262724	114262725	chr9:114262725:T:C	rs112122421	T	C	T	Sox2_MA0143.3	2	1	-	8.676919043985553	2.5582713367092715	CCATTGTG
chr9	114286328	114286329	chr9:114286329:C:T	rs4978577	C	T	C	Sox2_MA0143.3	8	0	+	0	0	.
chr9	114349670	114349671	chr9:114349671:T:C	rs10817593	T	C	T	Sox2_MA0143.3	21	0	+	0	0	.
chr9	114351121	114351122	chr9:114351122:C:A	rs140419348	C	A	C	Sox2_MA0143.3	20	0	-	0	0	.
chr9	114351160	114351161	chr9:114351161:A:T	rs3810934	A	T	A	Sox2_MA0143.3	-19	0	-	0	0	.
chr9	114390013	114390014	chr9:114390014:T:C	rs188661950	T	C	T	Sox2_MA0143.3	4	1	+	8.676919043985553	1.7681642646703322	CCATTGTG
chr9	114390021	114390022	chr9:114390022:G:A	rs10982193	G	A	G	Sox2_MA0143.3	12	0	+	0	0	.
chr9	114434990	114434991	chr9:114434991:C:A	chr9:114434991:C:A	C	A	C	Sox2_MA0143.3	-4	0	+	0	0	.
chr9	114485306	114485307	chr9:114485307:A:T	rs10817625	A	T	A	Sox2_MA0143.3	13	0	-	0	0	.
chr9	114660481	114660482	chr9:114660482:T:A	rs73656193	T	A	.	Sox2_MA0143.3	27	0	+	0	0	.
chr9	114717228	114717229	chr9:114717229:C:T	rs10125315	C	T	C	Sox2_MA0143.3	-17	0	+	0	0	.
chr9	114851603	114851604	chr9:114851604:G:A	rs12350663	G	A	g	Sox2_MA0143.3	-2	0	-	0	0	.
chr9	114935303	114935304	chr9:114935304:C:A	rs911603	C	A	A	Sox2_MA0143.3	1	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr9	114979059	114979060	chr9:114979060:G:A	rs11787779	G	A	G	Sox2_MA0143.3	-1	0	-	0	0	.
chr9	114979192	114979193	chr9:114979193:A:T	rs10120312	A	T	A	Sox2_MA0143.3	17	0	-	0	0	.
chr9	114989510	114989511	chr9:114989511:A:G	rs186985288	A	G	A	Sox2_MA0143.3	18	0	+	0	0	.
chr9	115098870	115098871	chr9:115098871:C:T	rs553144683	C	T	C	Sox2_MA0143.3	16	0	+	0	0	.
chr9	115118069	115118070	chr9:115118070:T:C	rs3748165	T	C	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr9	115118077	115118078	chr9:115118078:A:C	rs3748164	A	C	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr9	115220878	115220879	chr9:115220879:T:G	rs1537734	T	G	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr9	115225335	115225336	chr9:115225336:G:T	rs10982618	G	T	G	Sox2_MA0143.3	5	1	+	3.5547341015215945	-3.354020677793625	CCTTTGTA
chr9	115293193	115293194	chr9:115293194:A:C	rs74996336	A	C	A	Sox2_MA0143.3	13	0	+	0	0	.
chr9	115333420	115333421	chr9:115333421:T:A	rs1013502766	T	A	T	Sox2_MA0143.3	-19	0	+	0	0	.
chr9	115375218	115375219	chr9:115375219:T:G	rs78601911	T	G	T	Sox2_MA0143.3	26	0	-	0	0	.
chr9	115445146	115445147	chr9:115445147:G:A	rs114296665	G	A	g	Sox2_MA0143.3	24	0	+	0	0	.
chr9	115506356	115506357	chr9:115506357:T:C	rs4979547	T	C	T	Sox2_MA0143.3	-7	0	+	0	0	.
chr9	115514584	115514585	chr9:115514585:G:A	rs2418353	G	A	A	Sox2_MA0143.3	0	1	-	9.800647049772198	2.891892270456978	CCTTTGTT
chr9	115514592	115514593	chr9:115514593:C:G	rs7850720	C	G	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr9	115523393	115523394	chr9:115523394:A:C	rs7874560	A	C	A	Sox2_MA0143.3	6	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr9	115552067	115552068	chr9:115552068:A:C	rs4979553	A	C	A	Sox2_MA0143.3	-16	0	+	0	0	.
chr9	115553283	115553284	chr9:115553284:G:A	rs190817399	G	A	G	Sox2_MA0143.3	27	0	-	0	0	.
chr9	115783091	115783092	chr9:115783092:C:A	rs7041352	C	A	C	Sox2_MA0143.3	-10	0	-	0	0	.
chr9	115921896	115921897	chr9:115921897:A:C	rs112541274	A	C	A	Sox2_MA0143.3	-3	0	-	0	0	.
chr9	115921909	115921910	chr9:115921910:A:G	rs10817849	A	G	A	Sox2_MA0143.3	-16	0	-	0	0	.
chr9	115943366	115943367	chr9:115943367:T:C	rs7865204	T	C	C	Sox2_MA0143.3	19	0	+	0	0	.
chr9	115952828	115952829	chr9:115952829:C:A	rs34028600	C	A	C	Sox2_MA0143.3	27	0	-	0	0	.
chr9	116287678	116287679	chr9:116287679:C:T	rs10817870	C	T	c	Sox2_MA0143.3	1	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr9	116389046	116389047	chr9:116389047:C:T	rs10817883	C	T	T	Sox2_MA0143.3	11	0	-	0	0	.
chr9	116539698	116539699	chr9:116539699:G:A	rs56991011	G	A	G	Sox2_MA0143.3	11	0	-	0	0	.
chr9	116571949	116571950	chr9:116571950:G:A	rs34395359	G	A	G	Sox2_MA0143.3	19	0	+	0	0	.
chr9	116657481	116657482	chr9:116657482:G:T	rs1742822	G	T	T	Sox2_MA0143.3	9	0	-	0	0	.
chr9	116830111	116830112	chr9:116830112:T:C	rs536816600	T	C	T	Sox2_MA0143.3	-19	0	-	0	0	.
chr9	116857657	116857658	chr9:116857658:G:A	rs4837952	G	A	G	Sox2_MA0143.3	-13	0	+	0	0	.
chr9	116877195	116877196	chr9:116877196:G:A	rs1326819	G	A	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr9	116905543	116905544	chr9:116905544:C:T	rs16934046	C	T	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr9	117135933	117135934	chr9:117135934:G:A	rs10983541	G	A	G	Sox2_MA0143.3	-8	0	-	0	0	.
chr9	117205865	117205866	chr9:117205866:A:C	rs6478290	A	C	A	Sox2_MA0143.3	26	0	+	0	0	.
chr9	117205949	117205950	chr9:117205950:C:G	rs79257809	C	G	C	Sox2_MA0143.3	24	0	-	0	0	.
chr9	117248280	117248281	chr9:117248281:G:A	rs11790077	G	A	G	Sox2_MA0143.3	0	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr9	117269073	117269074	chr9:117269074:G:T	rs10983593	G	T	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr9	117290820	117290821	chr9:117290821:C:T	rs10983608	C	T	C	Sox2_MA0143.3	18	0	-	0	0	.
chr9	117407273	117407274	chr9:117407274:C:T	rs10739493	C	T	T	Sox2_MA0143.3	14	0	-	0	0	.
chr9	117549700	117549701	chr9:117549701:G:A	rs4837342	G	A	G	Sox2_MA0143.3	-1	0	+	0	0	.
chr9	117606596	117606597	chr9:117606597:A:C	rs4837402	A	C	C	Sox2_MA0143.3	26	0	+	0	0	.
chr9	117926472	117926473	chr9:117926473:C:T	chr9:117926473:C:T	C	T	C	Sox2_MA0143.3	-8	0	+	0	0	.
chr9	117972474	117972475	chr9:117972475:A:G	rs13301061	A	G	A	Sox2_MA0143.3	11	0	-	0	0	.
chr9	117992071	117992072	chr9:117992072:T:C	rs564958986	T	C	T	Sox2_MA0143.3	-8	0	+	0	0	.
chr9	118282036	118282037	chr9:118282037:G:A	rs16906869	G	A	G	Sox2_MA0143.3	17	0	+	0	0	.
chr9	118324758	118324759	chr9:118324759:C:T	rs16906945	C	T	C	Sox2_MA0143.3	17	0	-	0	0	.
chr9	118510876	118510877	chr9:118510877:G:C	rs7850642	G	C	C	Sox2_MA0143.3	13	0	+	0	0	.
chr9	118536472	118536473	chr9:118536473:G:A	rs10818181	G	A	G	Sox2_MA0143.3	8	0	+	0	0	.
chr9	118536477	118536478	chr9:118536478:G:A	rs10818182	G	A	G	Sox2_MA0143.3	13	0	+	0	0	.
chr9	118829531	118829532	chr9:118829532:A:G	rs2025757	A	G	A	Sox2_MA0143.3	27	0	-	0	0	.
chr9	118838921	118838922	chr9:118838922:C:T	rs62575470	C	T	C	Sox2_MA0143.3	11	0	-	0	0	.
chr9	119291257	119291258	chr9:119291258:G:C	rs1221130	G	C	C	Sox2_MA0143.3	26	0	+	0	0	.
chr9	120001924	120001925	chr9:120001925:T:A	rs57830978	T	A	T	Sox2_MA0143.3	20	0	-	0	0	.
chr9	120001935	120001936	chr9:120001936:T:C	rs10984787	T	C	C	Sox2_MA0143.3	9	0	-	0	0	.
chr9	120044820	120044821	chr9:120044821:C:A	rs12238332	C	A	C	Sox2_MA0143.3	-13	0	+	0	0	.
chr9	120156634	120156635	chr9:120156635:A:C	rs10984857	A	C	C	Sox2_MA0143.3	23	0	+	0	0	.
chr9	120306908	120306909	chr9:120306909:C:T	rs2110235	C	T	C	Sox2_MA0143.3	-12	0	+	0	0	.
chr9	120374155	120374156	chr9:120374156:G:A	rs142034041	G	A	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr9	120386497	120386498	chr9:120386498:G:A	rs549185416	G	A	G	Sox2_MA0143.3	26	0	-	0	0	.
chr9	120389962	120389963	chr9:120389963:A:C	rs2297456	A	C	C	Sox2_MA0143.3	-20	0	-	0	0	.
chr9	120394312	120394313	chr9:120394313:A:G	rs7859743	A	G	G	Sox2_MA0143.3	17	0	-	0	0	.
chr9	120394329	120394330	chr9:120394330:G:A	chr9:120394330:G:A	G	A	G	Sox2_MA0143.3	0	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr9	120542941	120542942	chr9:120542942:T:C	rs7854663	T	C	T	Sox2_MA0143.3	-19	0	-	0	0	.
chr9	120584091	120584092	chr9:120584092:C:G	rs113869271	C	G	C	Sox2_MA0143.3	5	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr9	120584141	120584142	chr9:120584142:A:G	rs115117125	A	G	A	Sox2_MA0143.3	-17	0	+	0	0	.
chr9	120659277	120659278	chr9:120659278:C:T	rs10984974	C	T	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr9	120711585	120711586	chr9:120711586:T:C	rs141541807	T	C	T	Sox2_MA0143.3	24	0	+	0	0	.
chr9	120712773	120712774	chr9:120712774:C:G	rs17346210	C	G	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr9	120728571	120728572	chr9:120728572:G:A	rs35846066	G	A	G	Sox2_MA0143.3	-16	0	-	0	0	.
chr9	120914117	120914118	chr9:120914118:G:C	rs2416804	G	C	G	Sox2_MA0143.3	1	1	-	3.5547341015215945	-3.354020677793626	CCTTTGTA
chr9	120925066	120925067	chr9:120925067:G:A	rs137888526	G	A	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr9	120925093	120925094	chr9:120925094:G:A	rs7034653	G	A	A	Sox2_MA0143.3	8	0	+	0	0	.
chr9	120941407	120941408	chr9:120941408:T:C	rs12338903	T	C	T	Sox2_MA0143.3	2	1	-	9.019595766176417	2.900948058900136	CCATTGTC
chr9	121021546	121021547	chr9:121021547:G:C	rs1158879069	G	C	G	Sox2_MA0143.3	8	0	-	0	0	.
chr9	121073420	121073421	chr9:121073421:T:C	rs73662477	T	C	T	Sox2_MA0143.3	21	0	+	0	0	.
chr9	121073425	121073426	chr9:121073426:G:A	rs72760205	G	A	G	Sox2_MA0143.3	26	0	+	0	0	.
chr9	121121974	121121975	chr9:121121975:T:C	chr9:121121975:T:C	T	C	T	Sox2_MA0143.3	7	1	-	3.5547341015215945	8.864090315184848	CCTTTGTA
chr9	121201135	121201136	chr9:121201136:A:G	rs2416819	A	G	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr9	121201163	121201164	chr9:121201164:C:A	rs182267965	C	A	C	Sox2_MA0143.3	8	0	+	0	0	.
chr9	121207518	121207519	chr9:121207519:A:G	rs79890599	A	G	A	Sox2_MA0143.3	20	0	-	0	0	.
chr9	121207555	121207556	chr9:121207556:C:T	rs7030849	C	T	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr9	121292957	121292958	chr9:121292958:C:T	rs1556139	C	T	C	Sox2_MA0143.3	23	0	-	0	0	.
chr9	121296898	121296899	chr9:121296899:T:C	rs4837834	T	C	T	Sox2_MA0143.3	-20	0	+	0	0	.
chr9	121313265	121313266	chr9:121313266:G:A	rs306761	G	A	A	Sox2_MA0143.3	18	0	+	0	0	.
chr9	121332521	121332522	chr9:121332522:T:C	rs9102	T	C	C	Sox2_MA0143.3	4	1	+	8.864090315184848	1.9553355358696274	CCTTTGTG
chr9	121357342	121357343	chr9:121357343:A:G	rs75524301	A	G	A	Sox2_MA0143.3	-1	0	-	0	0	.
chr9	121363705	121363706	chr9:121363706:G:C	rs116722857	G	C	G	Sox2_MA0143.3	21	0	-	0	0	.
chr9	121440988	121440989	chr9:121440989:G:A	rs112251546	G	A	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr9	121601904	121601905	chr9:121601905:T:C	rs10985328	T	C	t	Sox2_MA0143.3	22	0	+	0	0	.
chr9	121632836	121632837	chr9:121632837:G:C	rs2797351	G	C	C	Sox2_MA0143.3	24	0	-	0	0	.
chr9	121650911	121650912	chr9:121650912:G:C	rs10818577	G	C	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr9	121650918	121650919	chr9:121650919:T:C	rs34846876	T	C	T	Sox2_MA0143.3	-11	0	+	0	0	.
chr9	121725289	121725290	chr9:121725290:G:A	rs778069876	G	A	A	Sox2_MA0143.3	12	0	+	0	0	.
chr9	121725465	121725466	chr9:121725466:C:T	rs60846597	C	T	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr9	121827968	121827969	chr9:121827969:G:A	rs12353254	G	A	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr9	121836747	121836748	chr9:121836748:G:A	rs7854651	G	A	G	Sox2_MA0143.3	10	0	-	0	0	.
chr9	121841742	121841743	chr9:121841743:G:C	rs12339368	G	C	C	Sox2_MA0143.3	5	1	+	9.613475778572903	2.7047209992576837	CCATTGTT
chr9	121843616	121843617	chr9:121843617:C:T	rs10760193	C	T	C	Sox2_MA0143.3	13	0	-	0	0	.
chr9	121852556	121852557	chr9:121852557:G:C	rs35539176	G	C	G	Sox2_MA0143.3	17	0	+	0	0	.
chr9	121852638	121852639	chr9:121852639:C:T	rs58011736	C	T	C	Sox2_MA0143.3	8	0	-	0	0	.
chr9	121888607	121888608	chr9:121888608:T:G	rs143479911	T	G	T	Sox2_MA0143.3	4	1	+	3.5547341015215945	-3.3540206777936254	CCTTTGTA
chr9	121888614	121888615	chr9:121888615:C:T	rs146764504	C	T	T	Sox2_MA0143.3	11	0	+	0	0	.
chr9	121895903	121895904	chr9:121895904:C:A	rs62637676	C	A	A	Sox2_MA0143.3	1	1	+	8.864090315184848	1.955335535869627	CCTTTGTG
chr9	121903090	121903091	chr9:121903091:C:A	rs4304393	C	A	C	Sox2_MA0143.3	7	1	-	8.676919043985553	9.613475778572903	CCATTGTG
chr9	121945280	121945281	chr9:121945281:C:G	rs13300296	C	G	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr9	122116250	122116251	chr9:122116251:A:G	rs76326632	A	G	A	Sox2_MA0143.3	3	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr9	122119006	122119007	chr9:122119007:G:A	rs73563600	G	A	G	Sox2_MA0143.3	26	0	+	0	0	.
chr9	122125369	122125370	chr9:122125370:G:C	rs7855832	G	C	G	Sox2_MA0143.3	-12	0	+	0	0	.
chr9	122187464	122187465	chr9:122187465:T:C	rs913932	T	C	C	Sox2_MA0143.3	11	0	+	0	0	.
chr9	122371961	122371962	chr9:122371962:G:T	rs10306118	G	T	T	Sox2_MA0143.3	-5	0	-	0	0	.
chr9	122447103	122447104	chr9:122447104:G:A	rs1758708	G	A	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr9	122496327	122496328	chr9:122496328:G:A	rs62574267	G	A	G	Sox2_MA0143.3	23	0	+	0	0	.
chr9	122779919	122779920	chr9:122779920:G:T	rs2109690	G	T	.	Sox2_MA0143.3	24	0	+	0	0	.
chr9	122779922	122779923	chr9:122779923:C:T	rs58124363	C	T	.	Sox2_MA0143.3	27	0	+	0	0	.
chr9	123035213	123035214	chr9:123035214:C:T	rs72753270	C	T	C	Sox2_MA0143.3	22	0	-	0	0	.
chr9	123163001	123163002	chr9:123163002:G:A	rs115396333	G	A	g	Sox2_MA0143.3	9	0	-	0	0	.
chr9	123163002	123163003	chr9:123163003:T:A	chr9:123163003:T:A	T	A	T	Sox2_MA0143.3	8	0	-	0	0	.
chr9	123163132	123163133	chr9:123163133:A:G	rs78736459	A	G	A	Sox2_MA0143.3	23	0	-	0	0	.
chr9	123292629	123292630	chr9:123292630:C:G	rs10123218	C	G	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr9	123339926	123339927	chr9:123339927:C:T	rs118063573	C	T	C	Sox2_MA0143.3	11	0	+	0	0	.
chr9	123339927	123339928	chr9:123339928:G:A	rs73567561	G	A	G	Sox2_MA0143.3	12	0	+	0	0	.
chr9	123342525	123342526	chr9:123342526:A:C	rs2416903	A	C	A	Sox2_MA0143.3	-12	0	+	0	0	.
chr9	123358279	123358280	chr9:123358280:A:G	rs62579936	A	G	A	Sox2_MA0143.3	6	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr9	123358375	123358376	chr9:123358376:C:T	rs548694583	C	T	C	Sox2_MA0143.3	22	0	-	0	0	.
chr9	123376638	123376639	chr9:123376639:C:T	rs4838055	C	T	C	Sox2_MA0143.3	21	0	+	0	0	.
chr9	123406363	123406364	chr9:123406364:C:T	rs12341785	C	T	C	Sox2_MA0143.3	7	1	-	8.676919043985553	3.3675628303222993	CCATTGTG
chr9	123544500	123544501	chr9:123544501:C:T	rs12378293	C	T	T	Sox2_MA0143.3	-11	0	+	0	0	.
chr9	123679964	123679965	chr9:123679965:G:C	rs73580155	G	C	G	Sox2_MA0143.3	27	0	-	0	0	.
chr9	124066958	124066959	chr9:124066959:T:G	rs4838102	T	G	G	Sox2_MA0143.3	16	0	-	0	0	.
chr9	124066994	124066995	chr9:124066995:T:C	rs7868236	T	C	C	Sox2_MA0143.3	-20	0	-	0	0	.
chr9	124073204	124073205	chr9:124073205:G:A	rs3861868	G	A	A	Sox2_MA0143.3	23	0	+	0	0	.
chr9	124118197	124118198	chr9:124118198:C:A	rs10986226	C	A	C	Sox2_MA0143.3	20	0	-	0	0	.
chr9	124133909	124133910	chr9:124133910:A:G	rs2807591	A	G	G	Sox2_MA0143.3	-5	0	+	0	0	.
chr9	124133910	124133911	chr9:124133911:T:C	rs188766557	T	C	T	Sox2_MA0143.3	-4	0	+	0	0	.
chr9	124204634	124204635	chr9:124204635:A:G	rs12550944	A	G	G	Sox2_MA0143.3	24	0	-	0	0	.
chr9	124210525	124210526	chr9:124210526:G:T	rs72759272	G	T	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr9	124221902	124221903	chr9:124221903:G:A	rs953471	G	A	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr9	124222889	124222890	chr9:124222890:G:A	rs10986278	G	A	A	Sox2_MA0143.3	15	0	+	0	0	.
chr9	124267456	124267457	chr9:124267457:G:A	rs12379417	G	A	G	Sox2_MA0143.3	20	0	+	0	0	.
chr9	124439934	124439935	chr9:124439935:G:A	rs76800303	G	A	G	Sox2_MA0143.3	19	0	-	0	0	.
chr9	124537425	124537426	chr9:124537426:T:C	rs79521837	T	C	T	Sox2_MA0143.3	-17	0	-	0	0	.
chr9	124539368	124539369	chr9:124539369:C:T	rs115837360	C	T	C	Sox2_MA0143.3	8	0	-	0	0	.
chr9	124632558	124632559	chr9:124632559:T:C	rs149023420	T	C	T	Sox2_MA0143.3	-4	0	+	0	0	.
chr9	124659206	124659207	chr9:124659207:C:T	rs191936112	C	T	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr9	124660357	124660358	chr9:124660358:G:C	rs145970741	G	C	G	Sox2_MA0143.3	-9	0	-	0	0	.
chr9	124769822	124769823	chr9:124769823:G:T	chr9:124769823:G:T	G	T	G	Sox2_MA0143.3	21	0	+	0	0	.
chr9	124834531	124834532	chr9:124834532:A:C	rs4836999	A	C	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr9	124834532	124834533	chr9:124834533:G:A	rs4837000	G	A	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr9	124885902	124885903	chr9:124885903:C:T	rs13283523	C	T	C	Sox2_MA0143.3	17	0	-	0	0	.
chr9	124898128	124898129	chr9:124898129:C:G	rs10819005	C	G	C	Sox2_MA0143.3	5	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr9	125062735	125062736	chr9:125062736:C:A	rs827659	C	A	A	Sox2_MA0143.3	5	1	-	9.800647049772198	2.891892270456979	CCTTTGTT
chr9	125096390	125096391	chr9:125096391:G:A	rs10819029	G	A	G	Sox2_MA0143.3	-19	0	-	0	0	.
chr9	125104276	125104277	chr9:125104277:C:T	rs78635557	C	T	C	Sox2_MA0143.3	8	0	-	0	0	.
chr9	125134274	125134275	chr9:125134275:C:T	rs7021901	C	T	T	Sox2_MA0143.3	12	0	+	0	0	.
chr9	125465746	125465747	chr9:125465747:A:G	rs925473	A	G	A	Sox2_MA0143.3	21	0	-	0	0	.
chr9	125605606	125605607	chr9:125605607:C:T	rs4838277	C	T	C	Sox2_MA0143.3	-9	0	+	0	0	.
chr9	125659937	125659938	chr9:125659938:G:C	rs659228	G	C	C	Sox2_MA0143.3	23	0	+	0	0	.
chr9	125659941	125659942	chr9:125659942:T:C	chr9:125659942:T:C	T	C	T	Sox2_MA0143.3	27	0	+	0	0	.
chr9	125675725	125675726	chr9:125675726:A:G	rs1250736	A	G	A	Sox2_MA0143.3	4	1	-	9.800647049772198	2.8918922704569785	CCTTTGTT
chr9	125888410	125888411	chr9:125888411:A:G	rs78863346	A	G	A	Sox2_MA0143.3	-6	0	+	0	0	.
chr9	125890239	125890240	chr9:125890240:C:G	rs79587431	C	G	C	Sox2_MA0143.3	20	0	-	0	0	.
chr9	125899764	125899765	chr9:125899765:G:A	rs10987013	G	A	G	Sox2_MA0143.3	20	0	-	0	0	.
chr9	125974231	125974232	chr9:125974232:C:G	rs1477147	C	G	G	Sox2_MA0143.3	5	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr9	125992273	125992274	chr9:125992274:A:C	rs72752701	A	C	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr9	126001633	126001634	chr9:126001634:T:C	rs139310645	T	C	T	Sox2_MA0143.3	-19	0	-	0	0	.
chr9	126051814	126051815	chr9:126051815:A:G	rs7031734	A	G	A	Sox2_MA0143.3	9	0	-	0	0	.
chr9	126131121	126131122	chr9:126131122:G:A	rs1041701499	G	A	G	Sox2_MA0143.3	23	0	-	0	0	.
chr9	126183160	126183161	chr9:126183161:G:A	rs2809440	G	A	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr9	126207939	126207940	chr9:126207940:G:A	rs2417008	G	A	A	Sox2_MA0143.3	8	0	-	0	0	.
chr9	126302731	126302732	chr9:126302732:A:G	rs2536947	A	G	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr9	126376405	126376406	chr9:126376406:C:G	rs7863411	C	G	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr9	126377081	126377082	chr9:126377082:C:A	rs10987261	C	A	C	Sox2_MA0143.3	27	0	+	0	0	.
chr9	126379170	126379171	chr9:126379171:T:C	rs10124379	T	C	T	Sox2_MA0143.3	-5	0	+	0	0	.
chr9	126398932	126398933	chr9:126398933:G:C	rs141119820	G	C	G	Sox2_MA0143.3	1	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr9	126430347	126430348	chr9:126430348:C:A	rs10760434	C	A	C	Sox2_MA0143.3	23	0	+	0	0	.
chr9	126464912	126464913	chr9:126464913:G:A	rs12352000	G	A	G	Sox2_MA0143.3	20	0	+	0	0	.
chr9	126479210	126479211	chr9:126479211:A:G	rs10819166	A	G	A	Sox2_MA0143.3	13	0	+	0	0	.
chr9	126480136	126480137	chr9:126480137:C:T	rs10733679	C	T	C	Sox2_MA0143.3	15	0	+	0	0	.
chr9	126483897	126483898	chr9:126483898:T:C	rs2286886	T	C	T	Sox2_MA0143.3	3	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr9	126493946	126493947	chr9:126493947:G:A	rs376256992	G	A	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr9	126494697	126494698	chr9:126494698:T:C	rs4260977	T	C	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr9	126533020	126533021	chr9:126533021:G:T	rs10987329	G	T	G	Sox2_MA0143.3	15	0	+	0	0	.
chr9	126637590	126637591	chr9:126637591:A:G	rs12336217	A	G	G	Sox2_MA0143.3	25	0	+	0	0	.
chr9	126745791	126745792	chr9:126745792:A:G	rs7853493	A	G	g	Sox2_MA0143.3	2	1	+	9.613475778572903	3.494828071296623	CCATTGTT
chr9	126927564	126927565	chr9:126927565:C:G	rs552238	C	G	G	Sox2_MA0143.3	-18	0	+	0	0	.
chr9	126928202	126928203	chr9:126928203:T:C	rs546549	T	C	C	Sox2_MA0143.3	27	0	-	0	0	.
chr9	126935342	126935343	chr9:126935343:C:T	rs1328436	C	T	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr9	126966105	126966106	chr9:126966106:A:G	rs144936613	A	G	A	Sox2_MA0143.3	15	0	+	0	0	.
chr9	127015370	127015371	chr9:127015371:C:T	rs10987542	C	T	C	Sox2_MA0143.3	17	0	+	0	0	.
chr9	127023275	127023276	chr9:127023276:G:A	rs118083601	G	A	G	Sox2_MA0143.3	20	0	+	0	0	.
chr9	127073801	127073802	chr9:127073802:G:A	rs11791543	G	A	G	Sox2_MA0143.3	21	0	+	0	0	.
chr9	127112333	127112334	chr9:127112334:A:G	chr9:127112334:A:G	A	G	A	Sox2_MA0143.3	-6	0	-	0	0	.
chr9	127136792	127136793	chr9:127136793:C:T	rs10819269	C	T	C	Sox2_MA0143.3	23	0	+	0	0	.
chr9	127240350	127240351	chr9:127240351:G:A	rs7019618	G	A	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr9	127354078	127354079	chr9:127354079:A:G	rs3934537	A	G	A	Sox2_MA0143.3	-14	0	+	0	0	.
chr9	127354117	127354118	chr9:127354118:G:A	rs10987605	G	A	G	Sox2_MA0143.3	25	0	+	0	0	.
chr9	127504286	127504287	chr9:127504287:A:G	rs2245389	A	G	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr9	127522167	127522168	chr9:127522168:C:T	rs757072498	C	T	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr9	127536831	127536832	chr9:127536832:G:A	rs11789743	G	A	G	Sox2_MA0143.3	23	0	+	0	0	.
chr9	127551063	127551064	chr9:127551064:G:C	rs2491102	G	C	C	Sox2_MA0143.3	8	0	-	0	0	.
chr9	127560512	127560513	chr9:127560513:T:G	rs6478786	T	G	G	Sox2_MA0143.3	8	0	+	0	0	.
chr9	127574174	127574175	chr9:127574175:T:G	rs73607751	T	G	G	Sox2_MA0143.3	26	0	-	0	0	.
chr9	127574207	127574208	chr9:127574208:A:G	rs73607753	A	G	A	Sox2_MA0143.3	-7	0	-	0	0	.
chr9	127762537	127762538	chr9:127762538:C:T	rs3962613	C	T	T	Sox2_MA0143.3	-7	0	+	0	0	.
chr9	127869967	127869968	chr9:127869968:A:G	rs115665198	A	G	A	Sox2_MA0143.3	-3	0	-	0	0	.
chr9	127869975	127869976	chr9:127869976:C:T	rs117417032	C	T	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr9	127869976	127869977	chr9:127869977:G:A	rs144131388	G	A	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr9	128104439	128104440	chr9:128104440:T:C	rs947622	T	C	C	Sox2_MA0143.3	15	0	-	0	0	.
chr9	128177190	128177191	chr9:128177191:A:C	rs45499703	A	C	A	Sox2_MA0143.3	-6	0	+	0	0	.
chr9	128204538	128204539	chr9:128204539:G:C	rs10987928	G	C	C	Sox2_MA0143.3	-4	0	-	0	0	.
chr9	128204552	128204553	chr9:128204553:G:A	rs7851473	G	A	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr9	128235612	128235613	chr9:128235613:G:A	rs3003615	G	A	G	Sox2_MA0143.3	17	0	+	0	0	.
chr9	128304311	128304312	chr9:128304312:G:A	rs78884421	G	A	G	Sox2_MA0143.3	13	0	-	0	0	.
chr9	128409429	128409430	chr9:128409430:A:T	rs151026275	A	T	A	Sox2_MA0143.3	20	0	+	0	0	.
chr9	128607797	128607798	chr9:128607798:C:T	rs41275898	C	T	C	Sox2_MA0143.3	24	0	+	0	0	.
chr9	128851357	128851358	chr9:128851358:C:T	rs2805098	C	T	-	Sox2_MA0143.3	27	0	-	0	0	.
chr9	128899941	128899942	chr9:128899942:C:T	rs73669993	C	T	C	Sox2_MA0143.3	13	0	-	0	0	.
chr9	129093730	129093731	chr9:129093731:C:G	rs3124495	C	G	C	Sox2_MA0143.3	25	0	+	0	0	.
chr9	129173997	129173998	chr9:129173998:G:C	rs74566019	G	C	G	Sox2_MA0143.3	-12	0	-	0	0	.
chr9	129173999	129174000	chr9:129174000:G:T	rs935762785	G	T	G	Sox2_MA0143.3	-14	0	-	0	0	.
chr9	129176846	129176847	chr9:129176847:G:C	rs2274722	G	C	G	Sox2_MA0143.3	7	1	-	9.019595766176417	8.676919043985553	CCATTGTC
chr9	129178428	129178429	chr9:129178429:C:T	rs56784286	C	T	C	Sox2_MA0143.3	20	0	+	0	0	.
chr9	129240377	129240378	chr9:129240378:T:C	rs11787743	T	C	T	Sox2_MA0143.3	-3	0	+	0	0	.
chr9	129258665	129258666	chr9:129258666:G:C	rs887648732	G	C	G	Sox2_MA0143.3	14	0	-	0	0	.
chr9	129282015	129282016	chr9:129282016:C:G	chr9:129282016:C:G	C	G	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr9	129308981	129308982	chr9:129308982:C:T	rs117016656	C	T	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr9	129322341	129322342	chr9:129322342:G:A	rs913770	G	A	G	Sox2_MA0143.3	-9	0	+	0	0	.
chr9	129343960	129343961	chr9:129343961:A:G	rs7860232	A	G	G	Sox2_MA0143.3	22	0	+	0	0	.
chr9	129392378	129392379	chr9:129392379:A:G	rs10513516	A	G	A	Sox2_MA0143.3	2	1	+	8.676919043985553	2.5582713367092715	CCATTGTG
chr9	129415770	129415771	chr9:129415771:C:T	rs1810913	C	T	C	Sox2_MA0143.3	13	0	+	0	0	.
chr9	129416509	129416510	chr9:129416510:G:T	rs7848302	G	T	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr9	129439487	129439488	chr9:129439488:T:C	rs74654561	T	C	T	Sox2_MA0143.3	20	0	+	0	0	.
chr9	129439493	129439494	chr9:129439494:G:A	rs74603198	G	A	G	Sox2_MA0143.3	26	0	+	0	0	.
chr9	129443979	129443980	chr9:129443980:G:T	rs116800886	G	T	G	Sox2_MA0143.3	5	1	+	9.800647049772198	2.891892270456979	CCTTTGTT
chr9	129443987	129443988	chr9:129443988:C:T	rs77475289	C	T	C	Sox2_MA0143.3	13	0	+	0	0	.
chr9	129487818	129487819	chr9:129487819:A:C	rs117758942	A	C	A	Sox2_MA0143.3	12	0	+	0	0	.
chr9	129490465	129490466	chr9:129490466:A:T	rs541103927	A	T	A	Sox2_MA0143.3	-20	0	-	0	0	.
chr9	129525349	129525350	chr9:129525350:T:C	chr9:129525350:T:C	T	C	T	Sox2_MA0143.3	17	0	+	0	0	.
chr9	129525350	129525351	chr9:129525351:C:T	rs4524899	C	T	C	Sox2_MA0143.3	18	0	+	0	0	.
chr9	129611587	129611588	chr9:129611588:C:T	rs74811322	C	T	C	Sox2_MA0143.3	0	1	+	8.676919043985553	1.768164264670332	CCATTGTG
chr9	129627679	129627680	chr9:129627680:G:A	rs78337653	G	A	G	Sox2_MA0143.3	19	0	+	0	0	.
chr9	129762333	129762334	chr9:129762334:T:C	rs73672506	T	C	C	Sox2_MA0143.3	10	0	+	0	0	.
chr9	129762334	129762335	chr9:129762335:C:G	rs73672507	C	G	G	Sox2_MA0143.3	11	0	+	0	0	.
chr9	129763134	129763135	chr9:129763135:A:C	rs35460007	A	C	A	Sox2_MA0143.3	23	0	-	0	0	.
chr9	129857373	129857374	chr9:129857374:T:C	rs10116273	T	C	C	Sox2_MA0143.3	3	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr9	129884761	129884762	chr9:129884762:T:A	rs4495537	T	A	T	Sox2_MA0143.3	2	1	+	9.800647049772198	9.613475778572903	CCTTTGTT
chr9	129888384	129888385	chr9:129888385:G:T	rs57475328	G	T	G	Sox2_MA0143.3	-5	0	+	0	0	.
chr9	129888402	129888403	chr9:129888403:G:A	rs2296790	G	A	G	Sox2_MA0143.3	13	0	+	0	0	.
chr9	129902102	129902103	chr9:129902103:A:G	rs62583606	A	G	A	Sox2_MA0143.3	-19	0	+	0	0	.
chr9	129981641	129981642	chr9:129981642:G:A	rs116943481	G	A	G	Sox2_MA0143.3	15	0	-	0	0	.
chr9	130045026	130045027	chr9:130045027:C:T	rs7854338	C	T	C	Sox2_MA0143.3	-14	0	+	0	0	.
chr9	130185863	130185864	chr9:130185864:T:C	rs3850587	T	C	C	Sox2_MA0143.3	20	0	+	0	0	.
chr9	130195819	130195820	chr9:130195820:C:T	rs533555952	C	T	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr9	130226429	130226430	chr9:130226430:T:G	rs2277200	T	G	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr9	130240734	130240735	chr9:130240735:G:C	rs571398802	G	C	G	Sox2_MA0143.3	11	0	-	0	0	.
chr9	130246870	130246871	chr9:130246871:C:T	rs7866994	C	T	T	Sox2_MA0143.3	17	0	+	0	0	.
chr9	130276441	130276442	chr9:130276442:A:G	rs9657643	A	G	a	Sox2_MA0143.3	16	0	-	0	0	.
chr9	130283909	130283910	chr9:130283910:C:T	rs12376708	C	T	C	Sox2_MA0143.3	22	0	+	0	0	.
chr9	130289277	130289278	chr9:130289278:T:C	rs2417165	T	C	C	Sox2_MA0143.3	-11	0	-	0	0	.
chr9	130336400	130336401	chr9:130336401:A:G	rs1043021471	A	G	g	Sox2_MA0143.3	12	0	+	0	0	.
chr9	130339674	130339675	chr9:130339675:A:G	rs36183535	A	G	g	Sox2_MA0143.3	3	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr9	130400687	130400688	chr9:130400688:G:A	rs885531	G	A	A	Sox2_MA0143.3	11	0	+	0	0	.
chr9	130442724	130442725	chr9:130442725:C:T	rs7869828	C	T	C	Sox2_MA0143.3	12	0	+	0	0	.
chr9	130481906	130481907	chr9:130481907:G:T	rs480313	G	T	T	Sox2_MA0143.3	-7	0	+	0	0	.
chr9	130519052	130519053	chr9:130519053:A:G	rs475212	A	G	G	Sox2_MA0143.3	11	0	-	0	0	.
chr9	130524198	130524199	chr9:130524199:T:C	rs10119927	T	C	C	Sox2_MA0143.3	19	0	+	0	0	.
chr9	130538055	130538056	chr9:130538056:C:G	rs7851187	C	G	G	Sox2_MA0143.3	9	0	+	0	0	.
chr9	130606175	130606176	chr9:130606176:C:G	rs9657746	C	G	C	Sox2_MA0143.3	13	0	+	0	0	.
chr9	130608821	130608822	chr9:130608822:C:T	rs12346705	C	T	T	Sox2_MA0143.3	-15	0	+	0	0	.
chr9	130630198	130630199	chr9:130630199:A:G	rs77207900	A	G	A	Sox2_MA0143.3	2	1	+	9.019595766176417	2.900948058900136	CCATTGTC
chr9	130636005	130636006	chr9:130636006:C:T	rs76482042	C	T	C	Sox2_MA0143.3	21	0	+	0	0	.
chr9	130707544	130707545	chr9:130707545:G:A	rs369050499	G	A	G	Sox2_MA0143.3	12	0	+	0	0	.
chr9	130707552	130707553	chr9:130707553:A:G	rs142586590	A	G	A	Sox2_MA0143.3	20	0	+	0	0	.
chr9	130766985	130766986	chr9:130766986:G:T	rs138241489	G	T	G	Sox2_MA0143.3	-20	0	+	0	0	.
chr9	130835243	130835244	chr9:130835244:C:G	rs1274873128	C	G	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr9	130869284	130869285	chr9:130869285:G:A	rs7848941	G	A	A	Sox2_MA0143.3	27	0	+	0	0	.
chr9	130980497	130980498	chr9:130980498:G:C	rs12377745	G	C	G	Sox2_MA0143.3	1	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr9	131066711	131066712	chr9:131066712:C:T	rs4740405	C	T	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr9	131163310	131163311	chr9:131163311:T:A	rs4740417	T	A	T	Sox2_MA0143.3	-8	0	+	0	0	.
chr9	131270403	131270404	chr9:131270404:A:G	rs114303784	A	G	G	Sox2_MA0143.3	-3	0	-	0	0	.
chr9	131370837	131370838	chr9:131370838:T:C	rs1024277	T	C	T	Sox2_MA0143.3	2	1	-	8.676919043985553	2.5582713367092715	CCATTGTG
chr9	131393160	131393161	chr9:131393161:G:A	rs59460505	G	A	G	Sox2_MA0143.3	16	0	+	0	0	.
chr9	131394401	131394402	chr9:131394402:G:T	rs182293592	G	T	g	Sox2_MA0143.3	9	0	+	0	0	.
chr9	131433487	131433488	chr9:131433488:A:T	rs2994051	A	T	A	Sox2_MA0143.3	-9	0	+	0	0	.
chr9	131520299	131520300	chr9:131520300:C:A	rs2277153	C	A	A	Sox2_MA0143.3	19	0	-	0	0	.
chr9	131552974	131552975	chr9:131552975:T:C	rs10121616	T	C	C	Sox2_MA0143.3	4	1	+	8.676919043985553	1.7681642646703322	CCATTGTG
chr9	131589043	131589044	chr9:131589044:G:C	rs3824397	G	C	G	Sox2_MA0143.3	24	0	-	0	0	.
chr9	131606314	131606315	chr9:131606315:C:T	rs115971831	C	T	C	Sox2_MA0143.3	14	0	-	0	0	.
chr9	131636141	131636142	chr9:131636142:G:A	rs17148134	G	A	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr9	131643187	131643188	chr9:131643188:T:C	rs7854489	T	C	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr9	131775959	131775960	chr9:131775960:G:A	rs3012733	G	A	A	Sox2_MA0143.3	9	0	+	0	0	.
chr9	131778918	131778919	chr9:131778919:G:A	rs3012739	G	A	G	Sox2_MA0143.3	15	0	-	0	0	.
chr9	131801980	131801981	chr9:131801981:T:C	rs551152983	T	C	T	Sox2_MA0143.3	-7	0	-	0	0	.
chr9	131817781	131817782	chr9:131817782:A:G	rs10901103	A	G	A	Sox2_MA0143.3	-8	0	-	0	0	.
chr9	131923978	131923979	chr9:131923979:T:C	rs7047055	T	C	T	Sox2_MA0143.3	-7	0	+	0	0	.
chr9	131943121	131943122	chr9:131943122:T:C	rs4128956	T	C	C	Sox2_MA0143.3	7	1	-	3.5547341015215945	8.864090315184848	CCTTTGTA
chr9	132009273	132009274	chr9:132009274:C:T	rs77765468	C	T	C	Sox2_MA0143.3	16	0	+	0	0	.
chr9	132186886	132186887	chr9:132186887:A:G	rs10751490	A	G	G	Sox2_MA0143.3	6	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr9	132268868	132268869	chr9:132268869:G:A	rs968437803	G	A	G	Sox2_MA0143.3	0	1	-	9.206767037375712	2.298012258060491	CCTTTGTC
chr9	132298561	132298562	chr9:132298562:C:G	rs7875226	C	G	G	Sox2_MA0143.3	7	1	-	8.864090315184848	9.206767037375712	CCTTTGTG
chr9	132324428	132324429	chr9:132324429:C:G	rs524007	C	G	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr9	132422807	132422808	chr9:132422808:C:T	rs11795012	C	T	C	Sox2_MA0143.3	9	0	-	0	0	.
chr9	132425313	132425314	chr9:132425314:G:A	rs4537428	G	A	G	Sox2_MA0143.3	-5	0	+	0	0	.
chr9	132435027	132435028	chr9:132435028:C:A	rs563521	C	A	A	Sox2_MA0143.3	0	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr9	132440807	132440808	chr9:132440808:G:A	rs525620	G	A	A	Sox2_MA0143.3	13	0	-	0	0	.
chr9	132498257	132498258	chr9:132498258:A:G	rs504188	A	G	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr9	132546350	132546351	chr9:132546351:G:A	rs189691839	G	A	G	Sox2_MA0143.3	11	0	+	0	0	.
chr9	132777899	132777900	chr9:132777900:C:A	rs7857089	C	A	a	Sox2_MA0143.3	19	0	-	0	0	.
chr9	132793840	132793841	chr9:132793841:T:C	rs1410969	T	C	t	Sox2_MA0143.3	27	0	+	0	0	.
chr9	132864543	132864544	chr9:132864544:A:G	rs73660283	A	G	A	Sox2_MA0143.3	-6	0	+	0	0	.
chr9	132895321	132895322	chr9:132895322:G:A	rs117425923	G	A	G	Sox2_MA0143.3	-15	0	-	0	0	.
chr9	133061335	133061336	chr9:133061336:C:G	rs9328542	C	G	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr9	133081252	133081253	chr9:133081253:A:G	rs28758507	A	G	a	Sox2_MA0143.3	3	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr9	133101552	133101553	chr9:133101553:G:A	rs150606269	G	A	G	Sox2_MA0143.3	11	0	+	0	0	.
chr9	133102499	133102500	chr9:133102500:G:A	rs143632195	G	A	G	Sox2_MA0143.3	-3	0	-	0	0	.
chr9	133133849	133133850	chr9:133133850:C:G	rs542301	C	G	C	Sox2_MA0143.3	-18	0	+	0	0	.
chr9	133133861	133133862	chr9:133133862:T:C	rs542336	T	C	C	Sox2_MA0143.3	-6	0	+	0	0	.
chr9	133144551	133144552	chr9:133144552:G:A	rs950459539	G	A	G	Sox2_MA0143.3	11	0	+	0	0	.
chr9	133144562	133144563	chr9:133144563:G:T	rs987725903	G	T	G	Sox2_MA0143.3	22	0	+	0	0	.
chr9	133147767	133147768	chr9:133147768:G:C	rs1394882571	G	C	G	Sox2_MA0143.3	16	0	+	0	0	.
chr9	133153318	133153319	chr9:133153319:G:A	rs34521891	G	A	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr9	133163081	133163082	chr9:133163082:G:T	rs76680494	G	T	g	Sox2_MA0143.3	-9	0	+	0	0	.
chr9	133220343	133220344	chr9:133220344:C:T	rs61219450	C	T	C	Sox2_MA0143.3	-12	0	-	0	0	.
chr9	133233643	133233644	chr9:133233644:A:G	rs1306690986	A	G	.	Sox2_MA0143.3	-16	0	-	0	0	.
chr9	133233970	133233971	chr9:133233971:C:G	rs58775819	C	G	.	Sox2_MA0143.3	5	1	-	9.206767037375712	2.298012258060492	CCTTTGTC
chr9	133247225	133247226	chr9:133247226:C:T	rs114386128	C	T	c	Sox2_MA0143.3	-9	0	+	0	0	.
chr9	133247258	133247259	chr9:133247259:G:C	rs114826065	G	C	g	Sox2_MA0143.3	24	0	+	0	0	.
chr9	133257485	133257486	chr9:133257486:T:C	rs8176720	T	C	N	Sox2_MA0143.3	19	0	-	0	0	.
chr9	133368981	133368982	chr9:133368982:A:G	rs28688336	A	G	G	Sox2_MA0143.3	-6	0	-	0	0	.
chr9	133460023	133460024	chr9:133460024:G:A	rs1285901292	G	A	G	Sox2_MA0143.3	-4	0	+	0	0	.
chr9	133460037	133460038	chr9:133460038:G:A	rs2301614	G	A	G	Sox2_MA0143.3	10	0	+	0	0	.
chr9	133494476	133494477	chr9:133494477:C:T	rs73553519	C	T	C	Sox2_MA0143.3	13	0	+	0	0	.
chr9	133498307	133498308	chr9:133498308:G:A	rs28669169	G	A	A	Sox2_MA0143.3	27	0	-	0	0	.
chr9	133575021	133575022	chr9:133575022:G:A	rs1105952	G	A	A	Sox2_MA0143.3	-5	0	+	0	0	.
chr9	133599385	133599386	chr9:133599386:C:G	rs756771	C	G	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr9	133609797	133609798	chr9:133609798:C:T	rs79763351	C	T	C	Sox2_MA0143.3	-15	0	+	0	0	.
chr9	133613232	133613233	chr9:133613233:G:A	rs3025343	G	A	G	Sox2_MA0143.3	10	0	+	0	0	.
chr9	133671670	133671671	chr9:133671671:C:G	rs2519123	C	G	C	Sox2_MA0143.3	7	1	-	8.864090315184848	9.206767037375712	CCTTTGTG
chr9	133701380	133701381	chr9:133701381:C:T	rs530885012	C	T	C	Sox2_MA0143.3	-1	0	+	0	0	.
chr9	133765413	133765414	chr9:133765414:A:G	rs592820	A	G	A	Sox2_MA0143.3	-13	0	+	0	0	.
chr9	133816111	133816112	chr9:133816112:C:T	rs62576518	C	T	T	Sox2_MA0143.3	-19	0	+	0	0	.
chr9	133825205	133825206	chr9:133825206:C:T	rs12378243	C	T	C	Sox2_MA0143.3	12	0	-	0	0	.
chr9	133825734	133825735	chr9:133825735:C:T	rs2428094	C	T	C	Sox2_MA0143.3	13	0	-	0	0	.
chr9	133845873	133845874	chr9:133845874:G:A	rs1461647106	G	A	G	Sox2_MA0143.3	8	0	+	0	0	.
chr9	133848399	133848400	chr9:133848400:G:A	rs72762854	G	A	G	Sox2_MA0143.3	-14	0	+	0	0	.
chr9	133881967	133881968	chr9:133881968:A:G	rs7869522	A	G	G	Sox2_MA0143.3	19	0	-	0	0	.
chr9	133890561	133890562	chr9:133890562:G:C	rs2519115	G	C	G	Sox2_MA0143.3	13	0	+	0	0	.
chr9	133918273	133918274	chr9:133918274:C:G	rs641803	C	G	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr9	133932639	133932640	chr9:133932640:G:A	rs57945847	G	A	G	Sox2_MA0143.3	19	0	-	0	0	.
chr9	133943509	133943510	chr9:133943510:A:C	rs1633757	A	C	A	Sox2_MA0143.3	6	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr9	133955946	133955947	chr9:133955947:G:T	rs112134070	G	T	G	Sox2_MA0143.3	-18	0	-	0	0	.
chr9	133971783	133971784	chr9:133971784:G:A	rs191519753	G	A	G	Sox2_MA0143.3	18	0	-	0	0	.
chr9	133971787	133971788	chr9:133971788:C:A	rs117387481	C	A	C	Sox2_MA0143.3	14	0	-	0	0	.
chr9	133971807	133971808	chr9:133971808:C:T	rs560315585	C	T	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr9	133992686	133992687	chr9:133992687:T:G	rs930154437	T	G	T	Sox2_MA0143.3	-11	0	-	0	0	.
chr9	134001802	134001803	chr9:134001803:C:T	rs429755	C	T	C	Sox2_MA0143.3	19	0	+	0	0	.
chr9	134067787	134067788	chr9:134067788:C:A	rs777679857	C	A	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr9	134090942	134090943	chr9:134090943:G:A	rs11795118	G	A	g	Sox2_MA0143.3	-20	0	+	0	0	.
chr9	134129764	134129765	chr9:134129765:G:A	rs28412218	G	A	g	Sox2_MA0143.3	-5	0	-	0	0	.
chr9	134129770	134129771	chr9:134129771:C:T	rs28647893	C	T	c	Sox2_MA0143.3	-11	0	-	0	0	.
chr9	134166642	134166643	chr9:134166643:C:T	rs78765813	C	T	c	Sox2_MA0143.3	26	0	-	0	0	.
chr9	134214697	134214698	chr9:134214698:C:T	rs117009877	C	T	C	Sox2_MA0143.3	1	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr9	134215278	134215279	chr9:134215279:C:T	rs11789608	C	T	C	Sox2_MA0143.3	-18	0	-	0	0	.
chr9	134262023	134262024	chr9:134262024:T:C	rs10748520	T	C	C	Sox2_MA0143.3	10	0	-	0	0	.
chr9	134262035	134262036	chr9:134262036:A:G	rs10785882	A	G	G	Sox2_MA0143.3	-2	0	-	0	0	.
chr9	134287811	134287812	chr9:134287812:T:C	rs56155360	T	C	C	Sox2_MA0143.3	22	0	+	0	0	.
chr9	134324769	134324770	chr9:134324770:C:T	rs181107543	C	T	C	Sox2_MA0143.3	17	0	+	0	0	.
chr9	134369639	134369640	chr9:134369640:C:T	rs73663465	C	T	C	Sox2_MA0143.3	23	0	+	0	0	.
chr9	134405665	134405666	chr9:134405666:G:A	rs150888411	G	A	G	Sox2_MA0143.3	-12	0	+	0	0	.
chr9	134538439	134538440	chr9:134538440:T:C	rs550576310	T	C	T	Sox2_MA0143.3	19	0	+	0	0	.
chr9	134603843	134603844	chr9:134603844:G:T	rs112480152	G	T	T	Sox2_MA0143.3	-11	0	-	0	0	.
chr9	134607381	134607382	chr9:134607382:T:C	rs771947131	T	C	T	Sox2_MA0143.3	16	0	-	0	0	.
chr9	134626452	134626453	chr9:134626453:T:C	rs10858263	T	C	C	Sox2_MA0143.3	14	0	+	0	0	.
chr9	134705173	134705174	chr9:134705174:T:C	rs4842147	T	C	T	Sox2_MA0143.3	-17	0	+	0	0	.
chr9	134705208	134705209	chr9:134705209:C:T	rs4842148	C	T	C	Sox2_MA0143.3	18	0	+	0	0	.
chr9	134705706	134705707	chr9:134705707:C:T	rs3109690	C	T	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr9	134729406	134729407	chr9:134729407:T:G	rs3124304	T	G	T	Sox2_MA0143.3	13	0	+	0	0	.
chr9	134746273	134746274	chr9:134746274:G:A	rs7858851	G	A	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr9	134748843	134748844	chr9:134748844:T:A	rs7035108	T	A	T	Sox2_MA0143.3	-1	0	+	0	0	.
chr9	134812211	134812212	chr9:134812212:T:A	rs10745387	T	A	A	Sox2_MA0143.3	-15	0	+	0	0	.
chr9	134812235	134812236	chr9:134812236:T:C	rs13293801	T	C	T	Sox2_MA0143.3	9	0	+	0	0	.
chr9	134892966	134892967	chr9:134892967:G:T	rs58571982	G	T	g	Sox2_MA0143.3	22	0	-	0	0	.
chr9	134932766	134932767	chr9:134932767:T:G	rs10858294	T	G	T	Sox2_MA0143.3	8	0	+	0	0	.
chr9	134951311	134951312	chr9:134951312:C:G	rs10858301	C	G	C	Sox2_MA0143.3	14	0	-	0	0	.
chr9	135042612	135042613	chr9:135042613:G:A	rs625292	G	A	G	Sox2_MA0143.3	-16	0	+	0	0	.
chr9	135042636	135042637	chr9:135042637:C:G	rs635709	C	G	G	Sox2_MA0143.3	8	0	+	0	0	.
chr9	135082747	135082748	chr9:135082748:G:A	rs117143982	G	A	G	Sox2_MA0143.3	27	0	-	0	0	.
chr9	135129460	135129461	chr9:135129461:A:G	rs28595815	A	G	A	Sox2_MA0143.3	-17	0	-	0	0	.
chr9	135161370	135161371	chr9:135161371:G:A	rs6537988	G	A	G	Sox2_MA0143.3	-16	0	-	0	0	.
chr9	135179153	135179154	chr9:135179154:A:T	rs7025875	A	T	A	Sox2_MA0143.3	-3	0	-	0	0	.
chr9	135180203	135180204	chr9:135180204:G:C	rs2000306	G	C	G	Sox2_MA0143.3	-17	0	+	0	0	.
chr9	135247782	135247783	chr9:135247783:A:G	rs117839503	A	G	A	Sox2_MA0143.3	-8	0	-	0	0	.
chr9	135257319	135257320	chr9:135257320:C:T	rs7858253	C	T	C	Sox2_MA0143.3	11	0	+	0	0	.
chr9	135257470	135257471	chr9:135257471:C:T	rs7858399	C	T	C	Sox2_MA0143.3	14	0	-	0	0	.
chr9	135257489	135257490	chr9:135257490:G:A	rs80146394	G	A	G	Sox2_MA0143.3	-5	0	-	0	0	.
chr9	135274378	135274379	chr9:135274379:A:G	rs137911394	A	G	a	Sox2_MA0143.3	-10	0	-	0	0	.
chr9	135274481	135274482	chr9:135274482:C:T	rs115099594	C	T	C	Sox2_MA0143.3	-17	0	-	0	0	.
chr9	135282925	135282926	chr9:135282926:G:C	rs10116350	G	C	C	Sox2_MA0143.3	5	1	+	8.676919043985553	1.7681642646703324	CCATTGTG
chr9	135282947	135282948	chr9:135282948:G:T	rs56341922	G	T	G	Sox2_MA0143.3	27	0	+	0	0	.
chr9	135303356	135303357	chr9:135303357:A:C	rs4841962	A	C	A	Sox2_MA0143.3	-18	0	+	0	0	.
chr9	135339695	135339696	chr9:135339696:T:C	rs563898140	T	C	T	Sox2_MA0143.3	6	1	+	9.206767037375712	2.298012258060492	CCTTTGTC
chr9	135377317	135377318	chr9:135377318:G:A	rs1011471	G	A	g	Sox2_MA0143.3	-14	0	-	0	0	.
chr9	135393025	135393026	chr9:135393026:A:G	rs9409943	A	G	G	Sox2_MA0143.3	3	1	-	8.864090315184848	1.955335535869627	CCTTTGTG
chr9	135414793	135414794	chr9:135414794:A:G	rs2921315	A	G	G	Sox2_MA0143.3	26	0	-	0	0	.
chr9	135414822	135414823	chr9:135414823:A:G	rs12685288	A	G	A	Sox2_MA0143.3	-3	0	-	0	0	.
chr9	135491030	135491031	chr9:135491031:A:G	rs185234821	A	G	A	Sox2_MA0143.3	17	0	+	0	0	.
chr9	135492565	135492566	chr9:135492566:T:C	rs10858118	T	C	C	Sox2_MA0143.3	4	1	+	8.676919043985553	1.7681642646703322	CCATTGTG
chr9	135499858	135499859	chr9:135499859:G:A	rs113304227	G	A	G	Sox2_MA0143.3	11	0	+	0	0	.
chr9	135504475	135504476	chr9:135504476:C:T	rs56361957	C	T	C	Sox2_MA0143.3	7	1	+	9.206767037375712	9.800647049772198	CCTTTGTC
chr9	135514718	135514719	chr9:135514719:G:A	rs13290613	G	A	G	Sox2_MA0143.3	21	0	+	0	0	.
chr9	135539828	135539829	chr9:135539829:C:A	rs12001733	C	A	-	Sox2_MA0143.3	16	0	+	0	0	.
chr9	135574838	135574839	chr9:135574839:C:T	rs59932596	C	T	N	Sox2_MA0143.3	-20	0	+	0	0	.
chr9	135574855	135574856	chr9:135574856:C:T	rs60132134	C	T	N	Sox2_MA0143.3	-3	0	+	0	0	.
chr9	135658996	135658997	chr9:135658997:G:A	rs34985421	G	A	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr9	135882310	135882311	chr9:135882311:C:T	rs17038736	C	T	C	Sox2_MA0143.3	24	0	-	0	0	.
chr9	135894603	135894604	chr9:135894604:A:G	rs12005097	A	G	G	Sox2_MA0143.3	17	0	-	0	0	.
chr9	135925051	135925052	chr9:135925052:T:C	rs4842048	T	C	T	Sox2_MA0143.3	4	1	+	9.019595766176417	2.1108409868611964	CCATTGTC
chr9	135925059	135925060	chr9:135925060:T:C	rs4842049	T	C	C	Sox2_MA0143.3	12	0	+	0	0	.
chr9	135980121	135980122	chr9:135980122:C:T	rs2004852	C	T	C	Sox2_MA0143.3	-5	0	+	0	0	.
chr9	136004870	136004871	chr9:136004871:T:G	rs10776865	T	G	G	Sox2_MA0143.3	8	0	-	0	0	.
chr9	136020805	136020806	chr9:136020806:G:A	rs143032327	G	A	G	Sox2_MA0143.3	18	0	-	0	0	.
chr9	136021942	136021943	chr9:136021943:C:T	rs4842076	C	T	T	Sox2_MA0143.3	27	0	+	0	0	.
chr9	136048071	136048072	chr9:136048072:T:G	rs952068717	T	G	T	Sox2_MA0143.3	-10	0	+	0	0	.
chr9	136066493	136066494	chr9:136066494:A:G	rs10858216	A	G	G	Sox2_MA0143.3	11	0	-	0	0	.
chr9	136088828	136088829	chr9:136088829:C:T	rs60426293	C	T	C	Sox2_MA0143.3	5	1	-	8.864090315184848	1.9553355358696278	CCTTTGTG
chr9	136093294	136093295	chr9:136093295:A:G	rs1717455	A	G	A	Sox2_MA0143.3	22	0	-	0	0	.
chr9	136131606	136131607	chr9:136131607:C:T	rs76997145	C	T	C	Sox2_MA0143.3	27	0	+	0	0	.
chr9	136152042	136152043	chr9:136152043:A:G	rs1622201	A	G	A	Sox2_MA0143.3	3	1	-	8.676919043985553	1.768164264670332	CCATTGTG
chr9	136152052	136152053	chr9:136152053:C:T	rs62581512	C	T	C	Sox2_MA0143.3	-7	0	-	0	0	.
chr9	136188405	136188406	chr9:136188406:C:A	rs75329957	C	A	C	Sox2_MA0143.3	-20	0	-	0	0	.
chr9	136254803	136254804	chr9:136254804:C:T	rs72775710	C	T	T	Sox2_MA0143.3	-14	0	-	0	0	.
chr9	136266294	136266295	chr9:136266295:C:G	rs185808769	C	G	C	Sox2_MA0143.3	-1	0	-	0	0	.
chr9	136304734	136304735	chr9:136304735:A:C	rs36145994	A	C	C	Sox2_MA0143.3	-7	0	+	0	0	.
chr9	136322476	136322477	chr9:136322477:C:T	rs1039304658	C	T	t	Sox2_MA0143.3	-18	0	-	0	0	.
chr9	136322634	136322635	chr9:136322635:C:T	rs28971348	C	T	t	Sox2_MA0143.3	13	0	-	0	0	.
chr9	136327838	136327839	chr9:136327839:C:T	rs28555257	C	T	C	Sox2_MA0143.3	15	0	-	0	0	.
chr9	136328752	136328753	chr9:136328753:C:T	rs1447143037	C	T	C	Sox2_MA0143.3	12	0	+	0	0	.
chr9	136364796	136364797	chr9:136364797:A:G	rs11145750	A	G	G	Sox2_MA0143.3	-15	0	+	0	0	.
chr9	136443285	136443286	chr9:136443286:T:C	rs3124996	T	C	A	Sox2_MA0143.3	22	0	-	0	0	.
chr9	136482419	136482420	chr9:136482420:A:G	rs754517158	A	G	A	Sox2_MA0143.3	18	0	-	0	0	.
chr9	136526806	136526807	chr9:136526807:C:T	rs11574864	C	T	C	Sox2_MA0143.3	19	0	-	0	0	.
chr9	136526810	136526811	chr9:136526811:G:A	rs973486506	G	A	G	Sox2_MA0143.3	15	0	-	0	0	.
chr9	136530323	136530324	chr9:136530324:T:C	rs143640476	T	C	T	Sox2_MA0143.3	-20	0	+	0	0	.
chr9	136534349	136534350	chr9:136534350:T:C	rs10870080	T	C	C	Sox2_MA0143.3	2	1	-	8.676919043985553	2.5582713367092715	CCATTGTG
chr9	136534357	136534358	chr9:136534358:G:C	rs11145771	G	C	C	Sox2_MA0143.3	-6	0	-	0	0	.
chr9	136543952	136543953	chr9:136543953:C:T	rs143229795	C	T	C	Sox2_MA0143.3	-15	0	-	0	0	.
chr9	136570836	136570837	chr9:136570837:G:A	rs73564874	G	A	G	Sox2_MA0143.3	16	0	-	0	0	.
chr9	136622987	136622988	chr9:136622988:G:A	rs4880107	G	A	A	Sox2_MA0143.3	-10	0	+	0	0	.
chr9	136659738	136659739	chr9:136659739:C:A	rs13286733	C	A	C	Sox2_MA0143.3	-12	0	-	0	0	.
chr9	136698891	136698892	chr9:136698892:A:G	rs10115781	A	G	-	Sox2_MA0143.3	-14	0	+	0	0	.
chr9	136700425	136700426	chr9:136700426:G:A	rs10125398	G	A	G	Sox2_MA0143.3	-11	0	+	0	0	.
chr9	136714622	136714623	chr9:136714623:C:G	rs968510	C	G	C	Sox2_MA0143.3	1	1	+	9.613475778572903	2.7047209992576833	CCATTGTT
chr9	136851653	136851654	chr9:136851654:G:A	rs1033055905	G	A	G	Sox2_MA0143.3	24	0	+	0	0	.
chr9	136866683	136866684	chr9:136866684:C:G	rs115254412	C	G	C	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr9	136881741	136881742	chr9:136881742:G:C	rs3739943	G	C	G	Sox2_MA0143.3	-2	0	+	0	0	.
chr9	136918004	136918005	chr9:136918005:C:T	rs17250539	C	T	C	Sox2_MA0143.3	-8	0	-	0	0	.
chr9	136950216	136950217	chr9:136950217:C:A	rs115073671	C	A	C	Sox2_MA0143.3	-10	0	+	0	0	.
chr9	136950224	136950225	chr9:136950225:A:G	rs1012238163	A	G	A	Sox2_MA0143.3	-2	0	+	0	0	.
chr9	136979509	136979510	chr9:136979510:T:C	rs35848246	T	C	T	Sox2_MA0143.3	-11	0	+	0	0	.
chr9	137025404	137025405	chr9:137025405:C:G	rs117290495	C	G	C	Sox2_MA0143.3	-11	0	+	0	0	.
chr9	137055860	137055861	chr9:137055861:G:A	rs531926237	G	A	G	Sox2_MA0143.3	13	0	-	0	0	.
chr9	137119368	137119369	chr9:137119369:T:C	rs10870185	T	C	-	Sox2_MA0143.3	3	1	+	9.206767037375712	2.298012258060491	CCTTTGTC
chr9	137204632	137204633	chr9:137204633:G:C	rs139631190	G	C	.	Sox2_MA0143.3	13	0	+	0	0	.
chr9	137238112	137238113	chr9:137238113:G:A	rs72765107	G	A	G	Sox2_MA0143.3	-7	0	-	0	0	.
chr9	137238123	137238124	chr9:137238124:T:C	rs149539939	T	C	T	Sox2_MA0143.3	-18	0	-	0	0	.
chr9	137302325	137302326	chr9:137302326:G:T	chr9:137302326:G:T	G	T	-	Sox2_MA0143.3	1	1	-	9.613475778572903	2.7047209992576833	CCATTGTT
chr9	137302327	137302328	chr9:137302328:C:A	rs555768346	C	A	-	Sox2_MA0143.3	-1	0	-	0	0	.
chr9	137302330	137302331	chr9:137302331:C:T	rs566387995	C	T	-	Sox2_MA0143.3	-4	0	-	0	0	.
chr9	137302342	137302343	chr9:137302343:G:C	rs1262828397	G	C	-	Sox2_MA0143.3	-16	0	-	0	0	.
chr9	137319337	137319338	chr9:137319338:C:T	rs28592848	C	T	c	Sox2_MA0143.3	-6	0	+	0	0	.
chr9	137319340	137319341	chr9:137319341:C:T	rs28375538	C	T	C	Sox2_MA0143.3	-3	0	+	0	0	.
chr9	137371047	137371048	chr9:137371048:G:A	rs773516567	G	A	G	Sox2_MA0143.3	14	0	-	0	0	.
chr9	137371122	137371123	chr9:137371123:C:T	rs573546556	C	T	C	Sox2_MA0143.3	23	0	+	0	0	.
chr9	137411787	137411788	chr9:137411788:G:A	rs1010831756	G	A	G	Sox2_MA0143.3	13	0	-	0	0	.
chr9	137580073	137580074	chr9:137580074:A:G	rs2257839	A	G	G	Sox2_MA0143.3	-13	0	-	0	0	.
chr9	137604591	137604592	chr9:137604592:C:T	rs185021942	C	T	C	Sox2_MA0143.3	-3	0	-	0	0	.
chr9	137628126	137628127	chr9:137628127:G:A	rs72765187	G	A	G	Sox2_MA0143.3	-7	0	+	0	0	.
chr9	137679472	137679473	chr9:137679473:T:G	rs938294601	T	G	T	Sox2_MA0143.3	-13	0	+	0	0	.
chr9	137709593	137709594	chr9:137709594:G:T	rs1433353595	G	T	G	Sox2_MA0143.3	-19	0	+	0	0	.
chr9	137757603	137757604	chr9:137757604:G:A	rs10780187	G	A	A	Sox2_MA0143.3	-15	0	+	0	0	.
chr9	137766132	137766133	chr9:137766133:A:G	rs10867065	A	G	A	Sox2_MA0143.3	7	1	+	3.5547341015215945	8.864090315184848	CCTTTGTA
chr9	137807886	137807887	chr9:137807887:C:T	rs34390775	C	T	C	Sox2_MA0143.3	-2	0	+	0	0	.
chr9	137907957	137907958	chr9:137907958:G:A	rs546693318	G	A	G	Sox2_MA0143.3	-10	0	+	0	0	.
chr9	138016644	138016645	chr9:138016645:C:T	rs113501142	C	T	c	Sox2_MA0143.3	27	0	+	0	0	.
chr9	138016704	138016705	chr9:138016705:C:T	rs138059260	C	T	C	Sox2_MA0143.3	0	1	+	9.800647049772198	2.891892270456978	CCTTTGTT
chr9	138098495	138098496	chr9:138098496:G:A	rs1531165	G	A	A	Sox2_MA0143.3	25	0	-	0	0	.