chr1	633070	633071	chr1:633071:C:T	rs78032279	C	T	.	SOX2_HMG_3	11	1	+	8.257189167493795	14.949880665726145	CATCAATGGTACTGAAC
chr1	1381238	1381239	chr1:1381239:C:T	rs1014362748	C	T	C	SOX2_HMG_3	23	0	+	0	0	.
chr1	1574075	1574076	chr1:1574076:A:C	rs186792539	A	C	A	SOX2_HMG_3	18	0	+	0	0	.
chr1	2372126	2372127	chr1:2372127:A:G	rs2840534	A	G	A	SOX2_HMG_3	-1	0	-	0	0	.
chr1	2376784	2376785	chr1:2376785:G:C	rs12404555	G	C	G	SOX2_HMG_3	28	0	-	0	0	.
chr1	2541698	2541699	chr1:2541699:C:T	rs374224216	C	T	.	SOX2_HMG_3	-6	0	-	0	0	.
chr1	2636985	2636986	chr1:2636986:T:C	rs4648661	T	C	T	SOX2_HMG_3	-15	0	+	0	0	.
chr1	2895248	2895249	chr1:2895249:G:A	rs1456465	G	A	G	SOX2_HMG_3	-2	0	-	0	0	.
chr1	3112008	3112009	chr1:3112009:A:T	rs542281671	A	T	A	SOX2_HMG_3	10	1	+	1.4349808126288623	-5.473773966686357	GATAAATGTCAGTGCGG
chr1	3135700	3135701	chr1:3135701:A:C	rs7535865	A	C	C	SOX2_HMG_3	28	0	+	0	0	.
chr1	3712098	3712099	chr1:3712099:A:G	rs6424089	A	G	G	SOX2_HMG_3	20	0	-	0	0	.
chr1	3712112	3712113	chr1:3712113:A:G	rs6424090	A	G	G	SOX2_HMG_3	6	1	-	3.4551439038899794	-3.45361087542524	GGATAATGCAATTGATA
chr1	3878826	3878827	chr1:3878827:T:C	rs10737189	T	C	C	SOX2_HMG_3	-19	0	-	0	0	.
chr1	4172456	4172457	chr1:4172457:C:T	rs12405392	C	T	T	SOX2_HMG_3	-17	0	+	0	0	.
chr1	4172478	4172479	chr1:4172479:A:G	rs56827341	A	G	A	SOX2_HMG_3	5	1	+	7.034924528804151	0.12616974948892956	CCTCCATGGTATTGAAG
chr1	4213781	4213782	chr1:4213782:T:C	rs10753372	T	C	T	SOX2_HMG_3	16	1	+	4.980235800600867	3.7834637474605133	GATCAACTCCAGTGAAT
chr1	4307112	4307113	chr1:4307113:A:G	rs116019360	A	G	A	SOX2_HMG_3	18	0	-	0	0	.
chr1	4470380	4470381	chr1:4470381:T:C	rs6426415	T	C	C	SOX2_HMG_3	5	1	-	4.05216758829364	-2.85658719102158	GGTCAATTCTAGGGAGA
chr1	4524257	4524258	chr1:4524258:A:T	rs241241	A	T	A	SOX2_HMG_3	1	1	+	2.545206441318929	-0.46083741120438676	CATCAATGGTCATGAAT
chr1	4588801	4588802	chr1:4588802:C:T	rs549150	C	T	T	SOX2_HMG_3	13	1	-	5.047703585871087	-1.8610511934441338	CAGCAATACAATTGTAG
chr1	4796260	4796261	chr1:4796261:C:T	rs77293842	C	T	C	SOX2_HMG_3	-20	0	+	0	0	.
chr1	4837367	4837368	chr1:4837368:C:T	rs28429579	C	T	C	SOX2_HMG_3	-20	0	-	0	0	.
chr1	5530386	5530387	chr1:5530387:T:C	rs9661864	T	C	C	SOX2_HMG_3	17	0	-	0	0	.
chr1	5586141	5586142	chr1:5586142:G:A	rs12036552	G	A	G	SOX2_HMG_3	33	0	+	0	0	.
chr1	5671679	5671680	chr1:5671680:A:G	rs77948710	A	G	A	SOX2_HMG_3	-13	0	+	0	0	.
chr1	5748645	5748646	chr1:5748646:T:C	rs112126941	T	C	C	SOX2_HMG_3	6	1	+	1.582432347120786	-5.326322432194433	GATCCATGTTCTTGAGC
chr1	5748670	5748671	chr1:5748671:T:C	rs114988275	T	C	T	SOX2_HMG_3	31	0	+	0	0	.
chr1	5940217	5940218	chr1:5940218:T:C	rs57752624	T	C	T	SOX2_HMG_3	6	1	+	4.1214457102799225	-2.7873090690352984	GATGAATGCCATTGTCT
chr1	6028303	6028304	chr1:6028304:G:A	rs11121065	G	A	G	SOX2_HMG_3	27	0	-	0	0	.
chr1	6269954	6269955	chr1:6269955:T:C	rs3789512	T	C	T	SOX2_HMG_3	-4	0	+	0	0	.
chr1	6512210	6512211	chr1:6512211:C:G	rs9787374	C	G	C	SOX2_HMG_3	15	1	-	3.2979477620077153	2.12261462409848	AGCCAATGGTATGGAGG
chr1	6762349	6762350	chr1:6762350:T:A	rs35916265	T	A	T	SOX2_HMG_3	30	0	-	0	0	.
chr1	7007908	7007909	chr1:7007909:C:T	rs6577400	C	T	T	SOX2_HMG_3	27	0	-	0	0	.
chr1	7053001	7053002	chr1:7053002:T:G	rs4376764	T	G	G	SOX2_HMG_3	-6	0	-	0	0	.
chr1	7302931	7302932	chr1:7302932:A:G	rs12410983	A	G	A	SOX2_HMG_3	15	1	+	1.8698406024240664	1.4373670208731655	AGGCAATGACAGTGCAG
chr1	7426256	7426257	chr1:7426257:T:C	rs12088178	T	C	C	SOX2_HMG_3	33	0	-	0	0	.
chr1	7477439	7477440	chr1:7477440:G:A	rs1193182	G	A	A	SOX2_HMG_3	-12	0	+	0	0	.
chr1	7829880	7829881	chr1:7829881:C:T	rs2640908	C	T	C	SOX2_HMG_3	33	0	+	0	0	.
chr1	7955499	7955500	chr1:7955500:A:G	rs161799	A	G	A	SOX2_HMG_3	20	0	-	0	0	.
chr1	8015873	8015874	chr1:8015874:A:G	rs2294889	A	G	A	SOX2_HMG_3	2	1	-	4.960176599990911	-0.043195470324676244	AATCATTTTTAGTGTTT
chr1	8028888	8028889	chr1:8028889:G:A	rs11800783	G	A	G	SOX2_HMG_3	30	0	+	0	0	.
chr1	8121538	8121539	chr1:8121539:T:C	rs4908731	T	C	C	SOX2_HMG_3	26	0	+	0	0	.
chr1	8126778	8126779	chr1:8126779:C:A	rs61774165	C	A	C	SOX2_HMG_3	-14	0	-	0	0	.
chr1	8154713	8154714	chr1:8154714:T:C	rs7339868	T	C	C	SOX2_HMG_3	0	1	-	2.840402570176528	3.0609968492618216	ACACAAAGTCAGTGATG
chr1	8212465	8212466	chr1:8212466:G:A	rs425371	G	A	A	SOX2_HMG_3	1	1	+	5.2481643212402105	7.079811911319503	CGTCAGTTCTAGTGATG
chr1	8212476	8212477	chr1:8212477:T:A	rs389669	T	A	T	SOX2_HMG_3	12	1	+	5.2481643212402105	-1.6605904580750095	CGTCAGTTCTAGTGATG
chr1	8424468	8424469	chr1:8424469:A:G	rs57310340	A	G	A	SOX2_HMG_3	25	0	-	0	0	.
chr1	8719370	8719371	chr1:8719371:C:A	rs116819670	C	A	C	SOX2_HMG_3	35	0	+	0	0	.
chr1	8955615	8955616	chr1:8955616:G:C	rs12741044	G	C	G	SOX2_HMG_3	3	1	-	3.0609968492618216	-3.847757930053398	GTGCAAGGTCAGTGATG
chr1	8957031	8957032	chr1:8957032:C:T	rs2274332	C	T	C	SOX2_HMG_3	20	0	+	0	0	.
chr1	9083144	9083145	chr1:9083145:A:G	rs12748352	A	G	A	SOX2_HMG_3	-4	0	-	0	0	.
chr1	9083160	9083161	chr1:9083161:G:A	rs75856734	G	A	G	SOX2_HMG_3	-20	0	-	0	0	.
chr1	9125600	9125601	chr1:9125601:G:A	rs4908812	G	A	G	SOX2_HMG_3	13	1	+	3.6119766119997103	-3.29677816731551	AATCAGTGTTAGCGATG
chr1	9140123	9140124	chr1:9140124:G:A	rs66549228	G	A	G	SOX2_HMG_3	16	1	+	1.885544808831681	1.6118571924414098	ATTCAGTGGTGTTGATG
chr1	9187259	9187260	chr1:9187260:C:A	rs4141449	C	A	a	SOX2_HMG_3	32	0	-	0	0	.
chr1	9356091	9356092	chr1:9356092:G:A	rs9435243	G	A	G	SOX2_HMG_3	15	1	+	3.6918541736876245	4.124327755238525	GCTCAATGTCTTTGTGA
chr1	9437304	9437305	chr1:9437305:C:T	rs9659311	C	T	T	SOX2_HMG_3	9	1	+	2.6915456466432515	3.4982157805802974	TGGCAGTGGCATTGAGA
chr1	9922328	9922329	chr1:9922329:G:T	rs61743470	G	T	G	SOX2_HMG_3	-14	0	-	0	0	.
chr1	10016152	10016153	chr1:10016153:C:T	rs979830189	C	T	C	SOX2_HMG_3	24	0	+	0	0	.
chr1	10083491	10083492	chr1:10083492:T:A	rs79980202	T	A	T	SOX2_HMG_3	28	0	-	0	0	.
chr1	10420808	10420809	chr1:10420809:C:T	rs12755363	C	T	-	SOX2_HMG_3	-6	0	+	0	0	.
chr1	10714797	10714798	chr1:10714798:C:T	rs142540941	C	T	C	SOX2_HMG_3	-16	0	-	0	0	.
chr1	10714798	10714799	chr1:10714799:A:G	rs284247	A	G	G	SOX2_HMG_3	-17	0	-	0	0	.
chr1	10858495	10858496	chr1:10858496:T:G	rs111682832	T	G	T	SOX2_HMG_3	34	0	+	0	0	.
chr1	10974087	10974088	chr1:10974088:T:C	rs12081176	T	C	C	SOX2_HMG_3	20	0	+	0	0	.
chr1	10984557	10984558	chr1:10984558:T:C	rs55960292	T	C	T	SOX2_HMG_3	-19	0	-	0	0	.
chr1	11012158	11012159	chr1:11012159:T:G	rs774558919	T	G	t	SOX2_HMG_3	9	1	+	4.7749465183516495	-1.6644038527484495	GAACAAAGTTATTGTTT
chr1	11139091	11139092	chr1:11139092:T:C	rs2275528	T	C	T	SOX2_HMG_3	-6	0	+	0	0	.
chr1	11449497	11449498	chr1:11449498:C:G	rs60208389	C	G	C	SOX2_HMG_3	35	0	+	0	0	.
chr1	11498143	11498144	chr1:11498144:G:C	rs7537387	G	C	C	SOX2_HMG_3	0	1	-	8.813647718074114	9.558714619785437	CAACAATTGCAGTGAAG
chr1	11530117	11530118	chr1:11530118:C:T	rs67602684	C	T	C	SOX2_HMG_3	31	0	-	0	0	.
chr1	11838788	11838789	chr1:11838789:A:G	rs759858201	A	G	A	SOX2_HMG_3	9	1	-	4.150771620426752	3.344101486489706	GTTCAAAGCTAGTGTTG
chr1	11838791	11838792	chr1:11838792:T:G	rs198409	T	G	T	SOX2_HMG_3	6	1	-	4.150771620426752	4.150771620426752	GTTCAAAGCTAGTGTTG
chr1	11838801	11838802	chr1:11838802:G:A	rs55741089	G	A	G	SOX2_HMG_3	-4	0	-	0	0	.
chr1	11838811	11838812	chr1:11838812:C:T	rs551894492	C	T	C	SOX2_HMG_3	-14	0	-	0	0	.
chr1	11908384	11908385	chr1:11908385:G:A	rs369682507	G	A	G	SOX2_HMG_3	-9	0	+	0	0	.
chr1	11908388	11908389	chr1:11908389:T:C	rs527489760	T	C	T	SOX2_HMG_3	-5	0	+	0	0	.
chr1	11908391	11908392	chr1:11908392:G:A	rs76892591	G	A	G	SOX2_HMG_3	-2	0	+	0	0	.
chr1	11908397	11908398	chr1:11908398:A:G	rs1015002471	A	G	A	SOX2_HMG_3	4	1	+	7.132314530517603	0.22355975120238208	TATCAATTGTATTGCAT
chr1	11908402	11908403	chr1:11908403:T:C	rs556216716	T	C	t	SOX2_HMG_3	9	1	+	7.132314530517603	6.325644396580558	TATCAATTGTATTGCAT
chr1	11908407	11908408	chr1:11908408:C:T	rs927069180	C	T	T	SOX2_HMG_3	14	1	+	7.132314530517603	11.251839391270002	TATCAATTGTATTGCAT
chr1	11908409	11908410	chr1:11908410:T:C	rs140516253	T	C	T	SOX2_HMG_3	16	1	+	7.132314530517603	5.93554247737725	TATCAATTGTATTGCAT
chr1	11908417	11908418	chr1:11908418:C:T	rs191029441	C	T	C	SOX2_HMG_3	24	0	+	0	0	.
chr1	11908422	11908423	chr1:11908423:A:G	rs540419243	A	G	A	SOX2_HMG_3	29	0	+	0	0	.
chr1	11908429	11908430	chr1:11908430:T:G	rs145860767	T	G	t	SOX2_HMG_3	36	0	+	0	0	.
chr1	11979870	11979871	chr1:11979871:G:C	rs564944035	G	C	g	SOX2_HMG_3	-2	0	-	0	0	.
chr1	12075468	12075469	chr1:12075469:A:G	rs6690493	A	G	a	SOX2_HMG_3	24	0	+	0	0	.
chr1	12080378	12080379	chr1:12080379:T:C	rs78469249	T	C	T	SOX2_HMG_3	-5	0	-	0	0	.
chr1	12096178	12096179	chr1:12096179:A:G	rs11121855	A	G	A	SOX2_HMG_3	5	1	+	8.980324107493395	2.0715693281781737	AGCCAATTATATTGATG
chr1	12125716	12125717	chr1:12125717:A:G	rs11121876	A	G	A	SOX2_HMG_3	-19	0	-	0	0	.
chr1	12215462	12215463	chr1:12215463:G:C	rs235211	G	C	C	SOX2_HMG_3	5	1	+	2.9270980449688686	2.9270980449688686	GAGCAGTAGCAGTGATA
chr1	12406092	12406093	chr1:12406093:C:T	rs141028350	C	T	C	SOX2_HMG_3	7	1	-	3.7779421585596453	1.0491550379983106	GCTCCATGTAATTGTTT
chr1	12532888	12532889	chr1:12532889:G:A	rs12408667	G	A	g	SOX2_HMG_3	-11	0	-	0	0	.
chr1	12555716	12555717	chr1:12555717:C:T	rs7540756	C	T	C	SOX2_HMG_3	19	0	-	0	0	.
chr1	12557182	12557183	chr1:12557183:T:C	rs10864563	T	C	C	SOX2_HMG_3	9	1	-	1.5666846493489772	-3.0140903798043914	CGGCAATGCAAGCGATG
chr1	12557183	12557184	chr1:12557184:G:C	rs11799860	G	C	G	SOX2_HMG_3	8	1	-	1.5666846493489772	2.3009530821201785	CGGCAATGCAAGCGATG
chr1	12557188	12557189	chr1:12557189:G:A	rs11121932	G	A	A	SOX2_HMG_3	3	1	-	1.5666846493489772	-5.342070129966242	CGGCAATGCAAGCGATG
chr1	12670403	12670404	chr1:12670404:G:A	rs1857539	G	A	A	SOX2_HMG_3	-6	0	-	0	0	.
chr1	13227968	13227969	chr1:13227969:C:T	rs373542647	C	T	C	SOX2_HMG_3	25	0	+	0	0	.
chr1	13413247	13413248	chr1:13413248:A:G	rs781649782	A	G	-	SOX2_HMG_3	12	1	-	5.642581506406888	-1.2661732729083326	CATCCATGAAAGTGAAA
chr1	13422700	13422701	chr1:13422701:A:G	rs1037900867	A	G	A	SOX2_HMG_3	4	1	+	2.98850010570898	-3.920254673606237	ATTCATTTCCAGTGATT
chr1	13422702	13422703	chr1:13422703:T:C	rs899454463	T	C	T	SOX2_HMG_3	6	1	+	2.98850010570898	-3.9202546736062405	ATTCATTTCCAGTGATT
chr1	13586391	13586392	chr1:13586392:G:A	rs10927903	G	A	G	SOX2_HMG_3	8	1	-	3.6798812922937842	4.5516176449296495	ATTCAATGCTATTTTGG
chr1	13665984	13665985	chr1:13665985:A:G	rs10492979	A	G	A	SOX2_HMG_3	12	1	-	2.9098327458886133	-3.9989220334266062	CAGAAATGACATTGACG
chr1	13693271	13693272	chr1:13693272:G:A	rs3001731	G	A	G	SOX2_HMG_3	-10	0	+	0	0	.
chr1	13782214	13782215	chr1:13782215:G:T	chr1:13782215:G:T	G	T	G	SOX2_HMG_3	-15	0	-	0	0	.
chr1	13782216	13782217	chr1:13782217:C:T	rs61743100	C	T	C	SOX2_HMG_3	-17	0	-	0	0	.
chr1	13931171	13931172	chr1:13931172:A:G	rs6685990	A	G	A	SOX2_HMG_3	1	1	+	8.482758512822018	6.651110922742728	AATTAATGTTAGTGAAT
chr1	13965814	13965815	chr1:13965815:T:C	rs1997780	T	C	C	SOX2_HMG_3	4	1	-	4.1736483054171964	-2.7351064738980218	AAACAATGTAATTCAAT
chr1	14014320	14014321	chr1:14014321:A:G	rs1883647	A	G	A	SOX2_HMG_3	8	1	+	3.15737116059051	4.0064151079541395	GGGCAATGACATGGAAA
chr1	14055808	14055809	chr1:14055809:A:G	rs72861223	A	G	A	SOX2_HMG_3	17	0	+	0	0	.
chr1	14085310	14085311	chr1:14085311:T:C	rs72861288	T	C	T	SOX2_HMG_3	12	1	+	8.630586755512008	1.7218319761967875	AATCAATTTCAGTGTAC
chr1	14113796	14113797	chr1:14113797:A:G	rs12026570	A	G	G	SOX2_HMG_3	24	0	-	0	0	.
chr1	14113798	14113799	chr1:14113799:A:T	rs12026571	A	T	A	SOX2_HMG_3	22	0	-	0	0	.
chr1	14129039	14129040	chr1:14129040:T:C	rs4662113	T	C	C	SOX2_HMG_3	14	1	-	2.4072211138669797	-1.7746565034341395	GAGCAAGGGAAGTGAGT
chr1	14142405	14142406	chr1:14142406:T:C	rs10803463	T	C	T	SOX2_HMG_3	-15	0	+	0	0	.
chr1	14151448	14151449	chr1:14151449:G:A	rs929125	G	A	G	SOX2_HMG_3	31	0	+	0	0	.
chr1	14282526	14282527	chr1:14282527:G:A	rs61771844	G	A	G	SOX2_HMG_3	36	0	-	0	0	.
chr1	14815444	14815445	chr1:14815445:G:A	rs76100808	G	A	G	SOX2_HMG_3	22	0	+	0	0	.
chr1	14836849	14836850	chr1:14836850:C:T	rs79675220	C	T	T	SOX2_HMG_3	33	0	+	0	0	.
chr1	14863373	14863374	chr1:14863374:T:C	rs3765383	T	C	C	SOX2_HMG_3	-16	0	+	0	0	.
chr1	14863380	14863381	chr1:14863381:G:A	rs3765382	G	A	G	SOX2_HMG_3	-9	0	+	0	0	.
chr1	15151297	15151298	chr1:15151298:T:C	rs61782695	T	C	T	SOX2_HMG_3	6	1	+	2.239606255418325	-4.6691485238968955	AATAAATGGTAGGGAAG
chr1	15242924	15242925	chr1:15242925:T:C	rs10927746	T	C	T	SOX2_HMG_3	1	1	-	8.384510802694349	6.552863212615058	AATCCATTTTATTGAAA
chr1	15356912	15356913	chr1:15356913:T:A	rs11582182	T	A	t	SOX2_HMG_3	18	0	-	0	0	.
chr1	15662461	15662462	chr1:15662462:G:A	rs1240333	G	A	A	SOX2_HMG_3	18	0	+	0	0	.
chr1	15950040	15950041	chr1:15950041:A:G	rs11489779	A	G	A	SOX2_HMG_3	11	1	-	4.660661156587205	-2.032030341645142	TAGGAATGTCATTGAGA
chr1	15950057	15950058	chr1:15950058:C:T	rs11489780	C	T	C	SOX2_HMG_3	-6	0	-	0	0	.
chr1	16606014	16606015	chr1:16606015:G:A	rs4661392	G	A	.	SOX2_HMG_3	-7	0	+	0	0	.
chr1	16606040	16606041	chr1:16606041:C:T	rs1746695	C	T	.	SOX2_HMG_3	19	0	+	0	0	.
chr1	16606472	16606473	chr1:16606473:G:A	rs4661858	G	A	.	SOX2_HMG_3	-15	0	+	0	0	.
chr1	16723458	16723459	chr1:16723459:C:T	rs16854927	C	T	.	SOX2_HMG_3	-17	0	-	0	0	.
chr1	17005180	17005181	chr1:17005181:A:G	rs3738814	A	G	A	SOX2_HMG_3	14	1	+	2.216256593925902	-1.9656210233752176	AATCAAGGCTATGGAGA
chr1	17097637	17097638	chr1:17097638:T:C	rs2244949	T	C	C	SOX2_HMG_3	-1	0	-	0	0	.
chr1	17282049	17282050	chr1:17282050:C:G	rs3766301	C	G	C	SOX2_HMG_3	-17	0	-	0	0	.
chr1	17289873	17289874	chr1:17289874:C:T	rs74061529	C	T	C	SOX2_HMG_3	15	1	-	2.36444917184535	2.7969227533962506	GATAATTGGCATTGAGA
chr1	17503459	17503460	chr1:17503460:T:C	rs11203414	T	C	T	SOX2_HMG_3	12	1	+	6.275248364251746	-0.6335064150634746	GGCCAATTATAGTGAAA
chr1	17712064	17712065	chr1:17712065:T:C	rs4920624	T	C	T	SOX2_HMG_3	1	1	-	3.891013437586527	2.059365847507235	CATCAGTTGCAGTGACA
chr1	17923248	17923249	chr1:17923249:C:T	rs12092756	C	T	C	SOX2_HMG_3	-12	0	+	0	0	.
chr1	18079046	18079047	chr1:18079047:A:G	rs11260973	A	G	A	SOX2_HMG_3	10	1	+	2.4175425091503273	-4.491212270164892	AATCCATGGCATGGAGG
chr1	18079061	18079062	chr1:18079062:A:G	rs143276042	A	G	A	SOX2_HMG_3	25	0	+	0	0	.
chr1	18211279	18211280	chr1:18211280:C:T	rs2168388	C	T	C	SOX2_HMG_3	13	1	-	1.9074680476252768	-5.001286731689944	GATCAAAGCTCTTGAGT
chr1	18420600	18420601	chr1:18420601:G:A	rs11261002	G	A	G	SOX2_HMG_3	33	0	+	0	0	.
chr1	18435479	18435480	chr1:18435480:C:T	rs145003780	C	T	C	SOX2_HMG_3	-13	0	+	0	0	.
chr1	18448198	18448199	chr1:18448199:A:G	rs2946535	A	G	G	SOX2_HMG_3	10	1	+	10.165192782798146	3.2564380034829274	AGACAATGGCATTGAAT
chr1	18509710	18509711	chr1:18509711:C:T	rs61760679	C	T	C	SOX2_HMG_3	10	1	-	3.697913824656584	10.606668603971805	CATCAAGGTCGTTGATG
chr1	18978090	18978091	chr1:18978091:C:T	rs4912157	C	T	C	SOX2_HMG_3	-4	0	-	0	0	.
chr1	19505574	19505575	chr1:19505575:A:G	rs115908591	A	G	A	SOX2_HMG_3	2	1	+	6.29021654512832	6.29021654512832	AAACAATGGAAATGATG
chr1	19736301	19736302	chr1:19736302:G:T	rs192147021	G	T	G	SOX2_HMG_3	-8	0	-	0	0	.
chr1	19739684	19739685	chr1:19739685:C:G	rs11802745	C	G	C	SOX2_HMG_3	35	0	-	0	0	.
chr1	19876012	19876013	chr1:19876013:A:G	rs72658577	A	G	A	SOX2_HMG_3	-16	0	+	0	0	.
chr1	19927813	19927814	chr1:19927814:G:A	rs7520018	G	A	A	SOX2_HMG_3	20	0	-	0	0	.
chr1	20069374	20069375	chr1:20069375:G:A	rs528614	G	A	A	SOX2_HMG_3	18	0	+	0	0	.
chr1	20239010	20239011	chr1:20239011:T:C	rs74057261	T	C	T	SOX2_HMG_3	5	1	-	4.632833414285808	-2.275921365029413	GGTCAATTCAATTGGCT
chr1	20268294	20268295	chr1:20268295:C:T	rs10799623	C	T	T	SOX2_HMG_3	-20	0	+	0	0	.
chr1	20322662	20322663	chr1:20322663:A:G	rs10916765	A	G	A	SOX2_HMG_3	-14	0	+	0	0	.
chr1	20404353	20404354	chr1:20404354:A:G	rs11577874	A	G	G	SOX2_HMG_3	-3	0	-	0	0	.
chr1	20610166	20610167	chr1:20610167:C:T	rs12135846	C	T	C	SOX2_HMG_3	2	1	-	1.4705954636246756	1.4705954636246756	GGGCACTGTCATTGGTG
chr1	20661162	20661163	chr1:20661163:C:T	rs189424476	C	T	C	SOX2_HMG_3	34	0	+	0	0	.
chr1	20733212	20733213	chr1:20733213:C:G	rs78491441	C	G	C	SOX2_HMG_3	7	1	-	3.8080293474618707	-2.9248128639741044	AAAGAATGAAAGTGATG
chr1	20884481	20884482	chr1:20884482:G:C	rs115762292	G	C	G	SOX2_HMG_3	3	1	-	6.968174330806843	0.05941955149162137	CATCATTGACAGTGAAG
chr1	20949939	20949940	chr1:20949940:C:T	rs17417114	C	T	C	SOX2_HMG_3	0	1	+	3.5818133548145186	3.444484376765854	CGGCAATGTAATTAATA
chr1	21082284	21082285	chr1:21082285:G:C	rs1211820330	G	C	G	SOX2_HMG_3	36	0	+	0	0	.
chr1	21090533	21090534	chr1:21090534:T:C	rs61779075	T	C	T	SOX2_HMG_3	-18	0	+	0	0	.
chr1	21177786	21177787	chr1:21177787:G:A	rs74058841	G	A	G	SOX2_HMG_3	8	1	+	1.8701624385732956	1.0211184912096667	GCACAGTGGCATTGAGT
chr1	21350868	21350869	chr1:21350869:C:T	rs147359089	C	T	C	SOX2_HMG_3	-15	0	-	0	0	.
chr1	21452049	21452050	chr1:21452050:T:A	chr1:21452050:T:A	T	A	.	SOX2_HMG_3	-2	0	-	0	0	.
chr1	21587541	21587542	chr1:21587542:T:C	rs12117249	T	C	T	SOX2_HMG_3	-5	0	+	0	0	.
chr1	21819684	21819685	chr1:21819685:G:T	rs113947818	G	T	G	SOX2_HMG_3	28	0	+	0	0	.
chr1	21887915	21887916	chr1:21887916:G:A	rs185397994	G	A	G	SOX2_HMG_3	32	0	-	0	0	.
chr1	22224877	22224878	chr1:22224878:A:G	rs765131	A	G	A	SOX2_HMG_3	-11	0	-	0	0	.
chr1	22271563	22271564	chr1:22271564:A:G	rs2473242	A	G	A	SOX2_HMG_3	35	0	-	0	0	.
chr1	22272040	22272041	chr1:22272041:G:A	rs6681709	G	A	G	SOX2_HMG_3	32	0	-	0	0	.
chr1	22289310	22289311	chr1:22289311:A:G	rs17360519	A	G	G	SOX2_HMG_3	33	0	+	0	0	.
chr1	22404775	22404776	chr1:22404776:G:A	rs7543680	G	A	A	SOX2_HMG_3	-7	0	-	0	0	.
chr1	22614824	22614825	chr1:22614825:T:C	rs158766	T	C	C	SOX2_HMG_3	27	0	-	0	0	.
chr1	22952199	22952200	chr1:22952200:C:G	rs668745	C	G	T	SOX2_HMG_3	-3	0	-	0	0	.
chr1	23290906	23290907	chr1:23290907:C:G	rs628290	C	G	G	SOX2_HMG_3	35	0	+	0	0	.
chr1	23351534	23351535	chr1:23351535:T:G	rs72659795	T	G	T	SOX2_HMG_3	-2	0	-	0	0	.
chr1	23554420	23554421	chr1:23554421:G:A	rs34671368	G	A	G	SOX2_HMG_3	33	0	-	0	0	.
chr1	23565859	23565860	chr1:23565860:A:C	rs2811939	A	C	C	SOX2_HMG_3	-10	0	-	0	0	.
chr1	23757158	23757159	chr1:23757159:T:C	rs2076346	T	C	T	SOX2_HMG_3	35	0	-	0	0	.
chr1	23872799	23872800	chr1:23872800:T:C	rs2502995	T	C	C	SOX2_HMG_3	35	0	+	0	0	.
chr1	23984557	23984558	chr1:23984558:T:C	rs4649148	T	C	T	SOX2_HMG_3	11	1	+	4.913062999483923	-1.7796284987484234	CATTAATTTTATTGGTA
chr1	24023630	24023631	chr1:24023631:C:T	rs77772243	C	T	C	SOX2_HMG_3	-2	0	-	0	0	.
chr1	24187660	24187661	chr1:24187661:G:A	rs141858161	G	A	G	SOX2_HMG_3	30	0	-	0	0	.
chr1	24201902	24201903	chr1:24201903:A:G	rs6667221	A	G	G	SOX2_HMG_3	-2	0	+	0	0	.
chr1	24201919	24201920	chr1:24201920:C:T	chr1:24201920:C:T	C	T	C	SOX2_HMG_3	15	1	+	4.032864828399518	6.875573984576376	CATCAATAAAAGTGGCA
chr1	24428947	24428948	chr1:24428948:G:A	rs10903087	G	A	G	SOX2_HMG_3	13	1	+	4.3823005362571115	-2.526454243058109	CTTCCATGGTAGTGAGT
chr1	24501338	24501339	chr1:24501339:A:G	rs431454	A	G	A	SOX2_HMG_3	5	1	+	5.758881595020574	-1.1498731842946475	CATCAATATTAGTTAAA
chr1	24610877	24610878	chr1:24610878:T:C	chr1:24610878:T:C	T	C	T	SOX2_HMG_3	36	0	+	0	0	.
chr1	24988402	24988403	chr1:24988403:T:C	rs432169	T	C	t	SOX2_HMG_3	30	0	-	0	0	.
chr1	24988422	24988423	chr1:24988423:A:G	rs59899669	A	G	A	SOX2_HMG_3	10	1	-	3.3195038017581404	3.3195038017581404	TTTCAATGCATGTGATT
chr1	25074183	25074184	chr1:25074184:G:T	rs35253118	G	T	T	SOX2_HMG_3	9	1	-	2.1522544459648616	1.1003492379551785	GATCAATACCTGTGGTG
chr1	25425790	25425791	chr1:25425791:G:A	rs72660931	G	A	g	SOX2_HMG_3	27	0	-	0	0	.
chr1	25425796	25425797	chr1:25425797:A:C	rs72660932	A	C	a	SOX2_HMG_3	21	0	-	0	0	.
chr1	25553424	25553425	chr1:25553425:G:A	rs74693812	G	A	G	SOX2_HMG_3	-11	0	+	0	0	.
chr1	25647028	25647029	chr1:25647029:A:G	rs74062322	A	G	A	SOX2_HMG_3	5	1	+	5.337968819761893	-1.5707859595533276	TCTCAATAGCAGTGTAT
chr1	25649042	25649043	chr1:25649043:C:G	rs774167258	C	G	C	SOX2_HMG_3	36	0	-	0	0	.
chr1	26056677	26056678	chr1:26056678:C:T	rs12096733	C	T	C	SOX2_HMG_3	-1	0	-	0	0	.
chr1	26365558	26365559	chr1:26365559:A:G	rs4354529	A	G	a	SOX2_HMG_3	29	0	-	0	0	.
chr1	26619220	26619221	chr1:26619221:T:C	rs4970480	T	C	C	SOX2_HMG_3	18	0	-	0	0	.
chr1	26749815	26749816	chr1:26749816:G:A	rs551793788	G	A	G	SOX2_HMG_3	-14	0	+	0	0	.
chr1	28091391	28091392	chr1:28091392:G:A	rs76890118	G	A	g	SOX2_HMG_3	30	0	-	0	0	.
chr1	28091438	28091439	chr1:28091439:A:G	rs115953889	A	G	a	SOX2_HMG_3	-17	0	-	0	0	.
chr1	28105887	28105888	chr1:28105888:T:C	rs536132	T	C	N	SOX2_HMG_3	-14	0	-	0	0	.
chr1	28236164	28236165	chr1:28236165:A:G	rs12154	A	G	A	SOX2_HMG_3	-14	0	+	0	0	.
chr1	28737520	28737521	chr1:28737521:T:C	chr1:28737521:T:C	T	C	T	SOX2_HMG_3	18	0	-	0	0	.
chr1	28737523	28737524	chr1:28737524:C:T	rs61787567	C	T	C	SOX2_HMG_3	15	1	-	4.323799995878574	4.756273577429475	CAGGAATGGTAGTGAGG
chr1	28814642	28814643	chr1:28814643:G:A	rs533123	G	A	G	SOX2_HMG_3	20	0	-	0	0	.
chr1	29181737	29181738	chr1:29181738:G:A	rs200383319	G	A	G	SOX2_HMG_3	-17	0	+	0	0	.
chr1	29254577	29254578	chr1:29254578:C:G	rs16838061	C	G	C	SOX2_HMG_3	-6	0	-	0	0	.
chr1	29298862	29298863	chr1:29298863:G:A	rs9426315	G	A	A	SOX2_HMG_3	8	1	+	1.9701473385126456	1.121103391149018	GAACAATGGTAGTGCCC
chr1	29423742	29423743	chr1:29423743:A:G	rs1408863	A	G	G	SOX2_HMG_3	11	1	-	5.800503522803513	-0.8921879754288335	TCCCAATAGTATTGAAA
chr1	29782699	29782700	chr1:29782700:T:C	rs16832903	T	C	.	SOX2_HMG_3	-20	0	+	0	0	.
chr1	30015164	30015165	chr1:30015165:A:G	rs428294	A	G	G	SOX2_HMG_3	2	1	+	1.9298726971225821	1.9298726971225821	GAACACTGGCATTGGAG
chr1	30171241	30171242	chr1:30171242:C:T	rs6693191	C	T	C	SOX2_HMG_3	-15	0	-	0	0	.
chr1	30243907	30243908	chr1:30243908:C:T	rs1998011	C	T	C	SOX2_HMG_3	-9	0	-	0	0	.
chr1	30255520	30255521	chr1:30255521:T:G	rs6425919	T	G	T	SOX2_HMG_3	-16	0	+	0	0	.
chr1	30261935	30261936	chr1:30261936:A:G	rs56937378	A	G	G	SOX2_HMG_3	-20	0	+	0	0	.
chr1	30289839	30289840	chr1:30289840:G:C	rs107551	G	C	G	SOX2_HMG_3	-10	0	+	0	0	.
chr1	30597217	30597218	chr1:30597218:G:T	rs6665425	G	T	G	SOX2_HMG_3	-20	0	+	0	0	.
chr1	30599636	30599637	chr1:30599637:C:T	rs1408150	C	T	C	SOX2_HMG_3	-4	0	-	0	0	.
chr1	30676237	30676238	chr1:30676238:T:C	rs1188386	T	C	T	SOX2_HMG_3	36	0	+	0	0	.
chr1	30695919	30695920	chr1:30695920:C:T	rs12119696	C	T	C	SOX2_HMG_3	30	0	+	0	0	.
chr1	30755798	30755799	chr1:30755799:G:A	rs56126824	G	A	G	SOX2_HMG_3	-6	0	-	0	0	.
chr1	31203359	31203360	chr1:31203360:C:T	rs61778328	C	T	C	SOX2_HMG_3	22	0	+	0	0	.
chr1	31329676	31329677	chr1:31329677:G:A	rs12027502	G	A	G	SOX2_HMG_3	33	0	+	0	0	.
chr1	31386053	31386054	chr1:31386054:T:C	rs12122236	T	C	C	SOX2_HMG_3	12	1	+	3.942137999165268	-2.9666167801499523	TGTCAAAGGTAGTGTAG
chr1	31396692	31396693	chr1:31396693:A:G	chr1:31396693:A:G	A	G	A	SOX2_HMG_3	4	1	+	3.7688570976010958	-3.1398976817141238	AATCAATGATTTAGATA
chr1	31532563	31532564	chr1:31532564:G:A	rs114625793	G	A	G	SOX2_HMG_3	-10	0	+	0	0	.
chr1	31538052	31538053	chr1:31538053:C:T	rs74063780	C	T	C	SOX2_HMG_3	-5	0	-	0	0	.
chr1	31578204	31578205	chr1:31578205:G:A	rs114434987	G	A	G	SOX2_HMG_3	-18	0	+	0	0	.
chr1	31930401	31930402	chr1:31930402:C:T	rs12739816	C	T	C	SOX2_HMG_3	-13	0	+	0	0	.
chr1	32063463	32063464	chr1:32063464:A:G	rs72878639	A	G	A	SOX2_HMG_3	25	0	-	0	0	.
chr1	33007322	33007323	chr1:33007323:T:C	rs1534892	T	C	T	SOX2_HMG_3	5	1	-	4.398283235415005	-2.5104715439002163	CATCCATGGCAGTGTGA
chr1	33007340	33007341	chr1:33007341:A:G	rs1534893	A	G	G	SOX2_HMG_3	-13	0	-	0	0	.
chr1	33151746	33151747	chr1:33151747:A:G	rs7545367	A	G	A	SOX2_HMG_3	-7	0	+	0	0	.
chr1	33684950	33684951	chr1:33684951:C:T	rs649214	C	T	C	SOX2_HMG_3	18	0	-	0	0	.
chr1	33719070	33719071	chr1:33719071:A:G	rs114322616	A	G	A	SOX2_HMG_3	31	0	+	0	0	.
chr1	33828223	33828224	chr1:33828224:C:T	rs1570090	C	T	T	SOX2_HMG_3	-3	0	-	0	0	.
chr1	33973279	33973280	chr1:33973280:G:A	rs502199	G	A	G	SOX2_HMG_3	23	0	+	0	0	.
chr1	34190701	34190702	chr1:34190702:G:A	rs899380	G	A	A	SOX2_HMG_3	28	0	-	0	0	.
chr1	34519857	34519858	chr1:34519858:A:G	rs3845485	A	G	G	SOX2_HMG_3	18	0	-	0	0	.
chr1	34572104	34572105	chr1:34572105:C:T	rs10914976	C	T	-	SOX2_HMG_3	-10	0	+	0	0	.
chr1	34608019	34608020	chr1:34608020:C:T	rs12024207	C	T	C	SOX2_HMG_3	26	0	+	0	0	.
chr1	34654389	34654390	chr1:34654390:C:T	rs1415025	C	T	C	SOX2_HMG_3	36	0	+	0	0	.
chr1	34692105	34692106	chr1:34692106:T:C	rs76893325	T	C	T	SOX2_HMG_3	6	1	+	7.853379502158386	0.9446247228431666	GAACAATGGCAGTGGTT
chr1	34842989	34842990	chr1:34842990:A:G	rs11577735	A	G	A	SOX2_HMG_3	11	1	+	3.416256935478934	8.691868464491334	AACCAATGACAATGAGA
chr1	35182890	35182891	chr1:35182891:G:A	rs41267245	G	A	G	SOX2_HMG_3	23	0	-	0	0	.
chr1	36135171	36135172	chr1:36135172:A:C	rs11577123	A	C	A	SOX2_HMG_3	10	1	+	5.962751742068425	-0.9460030372467976	AATCAATGACATGGGTG
chr1	36168462	36168463	chr1:36168463:A:C	rs74066060	A	C	A	SOX2_HMG_3	24	0	+	0	0	.
chr1	36386254	36386255	chr1:36386255:C:G	rs531259670	C	G	C	SOX2_HMG_3	-17	0	+	0	0	.
chr1	36440495	36440496	chr1:36440496:G:T	rs116452848	G	T	G	SOX2_HMG_3	-11	0	-	0	0	.
chr1	36474141	36474142	chr1:36474142:C:T	rs3917965	C	T	C	SOX2_HMG_3	-5	0	+	0	0	.
chr1	36671597	36671598	chr1:36671598:C:T	rs219012	C	T	T	SOX2_HMG_3	8	1	-	4.46527778615636	3.6162338387927315	ATTCAAAGGAATTGAGT
chr1	36916063	36916064	chr1:36916064:G:A	rs112783139	G	A	G	SOX2_HMG_3	1	1	+	5.069227920386917	6.900875510466211	CGTCAATGAAATTCAGG
chr1	37197674	37197675	chr1:37197675:C:T	rs34544045	C	T	C	SOX2_HMG_3	25	0	+	0	0	.
chr1	37500851	37500852	chr1:37500852:C:G	rs144409419	C	G	C	SOX2_HMG_3	-2	0	-	0	0	.
chr1	37595485	37595486	chr1:37595486:C:T	rs150554077	C	T	C	SOX2_HMG_3	30	0	-	0	0	.
chr1	38221387	38221388	chr1:38221388:T:C	rs6685558	T	C	C	SOX2_HMG_3	31	0	-	0	0	.
chr1	38291564	38291565	chr1:38291565:G:A	rs2637869	G	A	A	SOX2_HMG_3	1	1	+	2.6729363685143377	4.50458395859363	CGTTAATGTTCTTGATG
chr1	38291598	38291599	chr1:38291599:G:T	rs2773164	G	T	G	SOX2_HMG_3	35	0	+	0	0	.
chr1	38677383	38677384	chr1:38677384:T:C	rs11585248	T	C	T	SOX2_HMG_3	22	0	+	0	0	.
chr1	38742071	38742072	chr1:38742072:C:T	rs644959	C	T	C	SOX2_HMG_3	-11	0	+	0	0	.
chr1	38861583	38861584	chr1:38861584:T:C	rs61780037	T	C	T	SOX2_HMG_3	-8	0	-	0	0	.
chr1	38874609	38874610	chr1:38874610:C:T	rs880303	C	T	C	SOX2_HMG_3	-14	0	-	0	0	.
chr1	39052333	39052334	chr1:39052334:G:A	rs10465799	G	A	a	SOX2_HMG_3	15	1	-	4.913081284843279	7.755790441020137	AATCTATTGTATTGACC
chr1	39785924	39785925	chr1:39785925:C:A	rs969289042	C	A	c	SOX2_HMG_3	36	0	-	0	0	.
chr1	40015650	40015651	chr1:40015651:T:C	rs36054808	T	C	T	SOX2_HMG_3	-3	0	-	0	0	.
chr1	40186486	40186487	chr1:40186487:G:A	rs61780445	G	A	A	SOX2_HMG_3	-16	0	-	0	0	.
chr1	40400615	40400616	chr1:40400616:C:T	rs2982508	C	T	C	SOX2_HMG_3	3	1	+	3.0681094115221317	-3.8406453677930874	ACGCAATGGAATGGATG
chr1	40567998	40567999	chr1:40567999:T:C	rs7515986	T	C	C	SOX2_HMG_3	24	0	-	0	0	.
chr1	40662424	40662425	chr1:40662425:C:G	chr1:40662425:C:G	C	G	C	SOX2_HMG_3	35	0	+	0	0	.
chr1	40876039	40876040	chr1:40876040:G:A	rs140672716	G	A	G	SOX2_HMG_3	25	0	+	0	0	.
chr1	40939991	40939992	chr1:40939992:G:T	rs6695161	G	T	T	SOX2_HMG_3	-2	0	+	0	0	.
chr1	41388544	41388545	chr1:41388545:C:T	rs2886109	C	T	C	SOX2_HMG_3	7	1	-	3.9517479370535007	1.2229608164921653	ACTCAACGGTATTGACC
chr1	41914134	41914135	chr1:41914135:T:A	rs72965235	T	A	T	SOX2_HMG_3	20	0	-	0	0	.
chr1	42706150	42706151	chr1:42706151:T:C	rs6663618	T	C	C	SOX2_HMG_3	22	0	-	0	0	.
chr1	42951029	42951030	chr1:42951030:C:T	rs115609302	C	T	C	SOX2_HMG_3	-5	0	+	0	0	.
chr1	43009912	43009913	chr1:43009913:C:T	rs2643016	C	T	c	SOX2_HMG_3	-18	0	-	0	0	.
chr1	43058035	43058036	chr1:43058036:G:T	rs841405	G	T	T	SOX2_HMG_3	-20	0	+	0	0	.
chr1	43271270	43271271	chr1:43271271:C:T	rs79825075	C	T	c	SOX2_HMG_3	-5	0	+	0	0	.
chr1	43272668	43272669	chr1:43272669:A:C	rs10890247	A	C	C	SOX2_HMG_3	24	0	-	0	0	.
chr1	44033569	44033570	chr1:44033570:A:G	rs1978195	A	G	A	SOX2_HMG_3	20	0	-	0	0	.
chr1	44040747	44040748	chr1:44040748:A:C	rs813642	A	C	A	SOX2_HMG_3	19	0	+	0	0	.
chr1	44050289	44050290	chr1:44050290:G:A	rs72683990	G	A	g	SOX2_HMG_3	-16	0	-	0	0	.
chr1	44128668	44128669	chr1:44128669:C:T	rs76285192	C	T	C	SOX2_HMG_3	-15	0	-	0	0	.
chr1	44653319	44653320	chr1:44653320:A:G	rs71653921	A	G	A	SOX2_HMG_3	5	1	+	8.153212121841488	1.2444573425262686	GATCAATGATACTGAAC
chr1	44719588	44719589	chr1:44719589:A:G	rs12746898	A	G	A	SOX2_HMG_3	1	1	+	4.297130561729773	2.4654829716504816	CATCAATGATAGTTTTC
chr1	44775233	44775234	chr1:44775234:C:G	rs114577765	C	G	C	SOX2_HMG_3	31	0	-	0	0	.
chr1	44776627	44776628	chr1:44776628:C:A	rs184816863	C	A	C	SOX2_HMG_3	7	1	-	2.476023122871969	0.431312618138432	GAGCAAGGCAAGTGAGG
chr1	45537454	45537455	chr1:45537455:T:A	rs2934861	T	A	T	SOX2_HMG_3	28	0	-	0	0	.
chr1	46481495	46481496	chr1:46481496:G:A	rs6679041	G	A	G	SOX2_HMG_3	1	1	+	6.9045804716785195	8.73622806175781	TGCCAATGACAGTGAAG
chr1	46534282	46534283	chr1:46534283:T:C	rs61783087	T	C	T	SOX2_HMG_3	-5	0	-	0	0	.
chr1	46715077	46715078	chr1:46715078:G:C	rs12078635	G	C	C	SOX2_HMG_3	33	0	+	0	0	.
chr1	47193772	47193773	chr1:47193773:T:C	rs7545034	T	C	T	SOX2_HMG_3	13	1	-	3.4428152634353886	10.351570042750609	CAGCAATGATATTAACA
chr1	47227704	47227705	chr1:47227705:T:C	rs2250495	T	C	T	SOX2_HMG_3	16	1	+	2.5237251943103822	1.3269531411700284	CTTCATTGGAAGTGAGT
chr1	47484459	47484460	chr1:47484460:A:G	rs10789510	A	G	G	SOX2_HMG_3	-8	0	-	0	0	.
chr1	47515850	47515851	chr1:47515851:T:C	rs11585530	T	C	T	SOX2_HMG_3	29	0	-	0	0	.
chr1	47631991	47631992	chr1:47631992:A:T	rs2506993	A	T	T	SOX2_HMG_3	17	0	+	0	0	.
chr1	48070416	48070417	chr1:48070417:G:A	rs528141240	G	A	G	SOX2_HMG_3	-20	0	+	0	0	.
chr1	48196541	48196542	chr1:48196542:C:T	rs823845	C	T	C	SOX2_HMG_3	-7	0	-	0	0	.
chr1	48208018	48208019	chr1:48208019:A:G	rs535295	A	G	A	SOX2_HMG_3	23	0	+	0	0	.
chr1	48402446	48402447	chr1:48402447:A:G	rs112644553	A	G	A	SOX2_HMG_3	35	0	-	0	0	.
chr1	48721158	48721159	chr1:48721159:T:C	rs190423041	T	C	T	SOX2_HMG_3	-11	0	+	0	0	.
chr1	48806570	48806571	chr1:48806571:A:C	rs17104909	A	C	A	SOX2_HMG_3	-17	0	-	0	0	.
chr1	48916834	48916835	chr1:48916835:G:A	rs10430111	G	A	G	SOX2_HMG_3	19	0	+	0	0	.
chr1	48953642	48953643	chr1:48953643:A:G	rs10788902	A	G	G	SOX2_HMG_3	10	1	+	3.2228185904342657	-3.685936188880954	GCTCAGTGAAAGTGAGG
chr1	49306779	49306780	chr1:49306780:A:T	rs241473	A	T	T	SOX2_HMG_3	34	0	+	0	0	.
chr1	50175983	50175984	chr1:50175984:G:A	rs78331461	G	A	G	SOX2_HMG_3	-3	0	-	0	0	.
chr1	51512692	51512693	chr1:51512693:A:G	rs74082612	A	G	A	SOX2_HMG_3	-17	0	+	0	0	.
chr1	51534658	51534659	chr1:51534659:C:T	rs56280508	C	T	C	SOX2_HMG_3	35	0	-	0	0	.
chr1	51902646	51902647	chr1:51902647:T:C	rs6698358	T	C	C	SOX2_HMG_3	33	0	-	0	0	.
chr1	52002752	52002753	chr1:52002753:G:C	rs72905964	G	C	G	SOX2_HMG_3	1	1	+	8.316581461451106	7.142185199007083	AGTCAGTGATATTGATT
chr1	52112069	52112070	chr1:52112070:T:G	rs72909945	T	G	t	SOX2_HMG_3	2	1	-	6.0781992321001885	4.942441996462643	AAACAATTACAGTGACT
chr1	52751869	52751870	chr1:52751870:C:A	rs12081018	C	A	c	SOX2_HMG_3	13	1	-	5.619647137412665	-1.2891076419025558	TATCAAAAATATTGAGA
chr1	53089792	53089793	chr1:53089793:C:T	rs202187580	C	T	C	SOX2_HMG_3	-14	0	+	0	0	.
chr1	53110919	53110920	chr1:53110920:T:C	rs1288371	T	C	C	SOX2_HMG_3	10	1	-	4.6199470485384	-2.2888077307768215	CATCAGTGGCATTGGGG
chr1	53183843	53183844	chr1:53183844:A:G	rs6668221	A	G	G	SOX2_HMG_3	21	0	+	0	0	.
chr1	53216026	53216027	chr1:53216027:T:G	rs1134688	T	G	T	SOX2_HMG_3	25	0	+	0	0	.
chr1	53562757	53562758	chr1:53562758:G:C	rs494082	G	C	G	SOX2_HMG_3	1	1	+	6.031238938749555	4.856842676305531	TGTCAATGGAGGTGATG
chr1	54051650	54051651	chr1:54051651:A:G	rs10489446	A	G	A	SOX2_HMG_3	-11	0	+	0	0	.
chr1	54714357	54714358	chr1:54714358:A:G	rs12057983	A	G	G	SOX2_HMG_3	-18	0	+	0	0	.
chr1	54835635	54835636	chr1:54835636:T:C	rs1180855	T	C	T	SOX2_HMG_3	21	0	+	0	0	.
chr1	54850267	54850268	chr1:54850268:G:T	rs11555500	G	T	G	SOX2_HMG_3	8	1	+	3.8262774665475194	3.963745386412182	AAACAATGGCACTGTTT
chr1	54880032	54880033	chr1:54880033:C:A	rs12042996	C	A	C	SOX2_HMG_3	27	0	+	0	0	.
chr1	54926794	54926795	chr1:54926795:T:C	rs67281988	T	C	C	SOX2_HMG_3	2	1	-	6.374442962186764	6.374442962186764	CTACAATGGCAGTGTTG
chr1	54927616	54927617	chr1:54927617:T:C	rs940831017	T	C	T	SOX2_HMG_3	32	0	+	0	0	.
chr1	55189143	55189144	chr1:55189144:T:C	rs75595726	T	C	T	SOX2_HMG_3	5	1	-	6.29350503684423	-0.6152497424709917	TATGAATGGAATTGTTA
chr1	55211370	55211371	chr1:55211371:T:C	rs1874773	T	C	T	SOX2_HMG_3	-8	0	+	0	0	.
chr1	55334096	55334097	chr1:55334097:C:T	rs207164	C	T	C	SOX2_HMG_3	-4	0	+	0	0	.
chr1	55623759	55623760	chr1:55623760:T:C	rs115220141	T	C	T	SOX2_HMG_3	35	0	-	0	0	.
chr1	55623809	55623810	chr1:55623810:T:C	rs61776377	T	C	T	SOX2_HMG_3	-15	0	-	0	0	.
chr1	55695230	55695231	chr1:55695231:G:C	rs12566150	G	C	G	SOX2_HMG_3	-16	0	-	0	0	.
chr1	56024401	56024402	chr1:56024402:A:C	rs7355032	A	C	A	SOX2_HMG_3	-5	0	+	0	0	.
chr1	56137841	56137842	chr1:56137842:T:A	rs77759064	T	A	T	SOX2_HMG_3	2	1	+	5.8398807443795615	1.9722659097015214	ACTCAATGCTAGAGATT
chr1	56304700	56304701	chr1:56304701:C:A	rs11206781	C	A	C	SOX2_HMG_3	-15	0	+	0	0	.
chr1	56345894	56345895	chr1:56345895:T:C	rs7529732	T	C	C	SOX2_HMG_3	20	0	+	0	0	.
chr1	56345905	56345906	chr1:56345906:T:C	rs7529741	T	C	C	SOX2_HMG_3	31	0	+	0	0	.
chr1	56517106	56517107	chr1:56517107:G:A	rs76009934	G	A	G	SOX2_HMG_3	25	0	-	0	0	.
chr1	56526743	56526744	chr1:56526744:A:G	rs6690245	A	G	A	SOX2_HMG_3	6	1	-	3.0639400843144178	-3.8448146950008026	AATAAATGTCATTGCAG
chr1	56527518	56527519	chr1:56527519:T:C	rs57966457	T	C	T	SOX2_HMG_3	14	1	+	5.373101441286221	1.2535765805338226	TATCATTTCTATTGTTA
chr1	56646958	56646959	chr1:56646959:A:T	rs4451572	A	T	A	SOX2_HMG_3	-19	0	+	0	0	.
chr1	56678312	56678313	chr1:56678313:A:G	rs2796498	A	G	A	SOX2_HMG_3	22	0	+	0	0	.
chr1	56799844	56799845	chr1:56799845:T:C	rs1935556	T	C	C	SOX2_HMG_3	-5	0	-	0	0	.
chr1	57307416	57307417	chr1:57307417:C:G	rs17115580	C	G	G	SOX2_HMG_3	28	0	+	0	0	.
chr1	57362872	57362873	chr1:57362873:C:T	rs10889039	C	T	.	SOX2_HMG_3	28	0	-	0	0	.
chr1	57367624	57367625	chr1:57367625:C:T	rs77406820	C	T	C	SOX2_HMG_3	33	0	+	0	0	.
chr1	57420711	57420712	chr1:57420712:T:C	rs4912248	T	C	C	SOX2_HMG_3	14	1	-	4.305016665550702	0.12313904824958255	GAGCAATTTTATGGAGA
chr1	57451088	57451089	chr1:57451089:A:C	rs17115795	A	C	A	SOX2_HMG_3	33	0	+	0	0	.
chr1	57711330	57711331	chr1:57711331:C:T	rs1323815	C	T	T	SOX2_HMG_3	8	1	-	3.7679148681772876	2.9188709208136583	AAATAATGGCAGTGAGA
chr1	57719444	57719445	chr1:57719445:G:A	rs68107934	G	A	A	SOX2_HMG_3	5	1	+	3.90493873156676	10.813693510881981	CCTCAGTGATATTGTTT
chr1	57761522	57761523	chr1:57761523:C:T	rs3131741	C	T	C	SOX2_HMG_3	-4	0	-	0	0	.
chr1	58005418	58005419	chr1:58005419:T:C	rs1325449	T	C	C	SOX2_HMG_3	32	0	+	0	0	.
chr1	58436815	58436816	chr1:58436816:T:C	rs706428	T	C	C	SOX2_HMG_3	-15	0	+	0	0	.
chr1	58574008	58574009	chr1:58574009:T:C	rs78279871	T	C	T	SOX2_HMG_3	-13	0	-	0	0	.
chr1	58595022	58595023	chr1:58595023:G:A	rs11582691	G	A	G	SOX2_HMG_3	15	1	+	3.435415681872378	3.867889263423279	AGCCAGTGTTATTGAGG
chr1	58855479	58855480	chr1:58855480:C:A	rs116728140	C	A	C	SOX2_HMG_3	-11	0	-	0	0	.
chr1	58863982	58863983	chr1:58863983:G:C	rs3015327	G	C	C	SOX2_HMG_3	22	0	-	0	0	.
chr1	58864020	58864021	chr1:58864021:C:T	rs61788416	C	T	C	SOX2_HMG_3	-16	0	-	0	0	.
chr1	58883897	58883898	chr1:58883898:C:T	rs12239208	C	T	C	SOX2_HMG_3	13	1	-	4.63387890632613	-2.27487587298909	GAACAAAGGCATTGTTG
chr1	58891153	58891154	chr1:58891154:T:C	rs6661505	T	C	C	SOX2_HMG_3	9	1	+	4.331435113070706	3.5247649791336597	CACCAATGGTCTTGAGA
chr1	58957938	58957939	chr1:58957939:G:T	rs11207352	G	T	G	SOX2_HMG_3	-11	0	+	0	0	.
chr1	59016341	59016342	chr1:59016342:C:A	rs17464436	C	A	C	SOX2_HMG_3	17	0	+	0	0	.
chr1	59128884	59128885	chr1:59128885:C:A	rs904467789	C	A	C	SOX2_HMG_3	16	1	-	1.9081600432679682	1.1050896014917784	AGGAAATGCCAGTGAAG
chr1	59180453	59180454	chr1:59180454:T:C	rs6681830	T	C	T	SOX2_HMG_3	6	1	+	3.188796519272275	-3.7199582600429464	GATCAATGGTATTTCTC
chr1	59181378	59181379	chr1:59181379:C:T	rs78147819	C	T	C	SOX2_HMG_3	24	0	-	0	0	.
chr1	59491246	59491247	chr1:59491247:A:G	rs834672	A	G	A	SOX2_HMG_3	-8	0	+	0	0	.
chr1	59689817	59689818	chr1:59689818:G:A	rs72666283	G	A	G	SOX2_HMG_3	2	1	+	12.23121753657712	12.23121753657712	AAGCAATGTCATTGAGA
chr1	59689847	59689848	chr1:59689848:A:G	rs11580721	A	G	G	SOX2_HMG_3	32	0	+	0	0	.
chr1	60891546	60891547	chr1:60891547:G:A	rs143426440	G	A	G	SOX2_HMG_3	16	1	-	3.2198384900938617	4.416610543234215	ACTCAATTTTCTTGAGC
chr1	61247245	61247246	chr1:61247246:T:C	rs333166	T	C	T	SOX2_HMG_3	5	1	-	8.664495687790858	1.7557409084756337	TATCAATGGCATTCAGG
chr1	61741581	61741582	chr1:61741582:A:G	rs7551399	A	G	G	SOX2_HMG_3	1	1	+	5.387617671438356	3.555970081359065	AATCAATCACAGTGTTT
chr1	62070946	62070947	chr1:62070947:C:G	rs6668421	C	G	C	SOX2_HMG_3	-19	0	+	0	0	.
chr1	62287390	62287391	chr1:62287391:T:C	rs2765254	T	C	C	SOX2_HMG_3	26	0	-	0	0	.
chr1	62405411	62405412	chr1:62405412:G:A	rs12747317	G	A	G	SOX2_HMG_3	23	0	-	0	0	.
chr1	62405418	62405419	chr1:62405419:C:T	rs182989045	C	T	C	SOX2_HMG_3	16	1	-	3.8773309127558906	3.603643296365619	AGGCGATGGCAGTGATG
chr1	62405428	62405429	chr1:62405429:A:G	rs10889329	A	G	A	SOX2_HMG_3	6	1	-	3.8773309127558906	-3.03142386655933	AGGCGATGGCAGTGATG
chr1	63320039	63320040	chr1:63320040:C:T	rs2235950	C	T	C	SOX2_HMG_3	32	0	-	0	0	.
chr1	63590739	63590740	chr1:63590740:C:A	rs11208250	C	A	C	SOX2_HMG_3	-8	0	-	0	0	.
chr1	63628939	63628940	chr1:63628940:A:T	rs10489613	A	T	A	SOX2_HMG_3	11	1	-	7.0386325861918575	0.3459410879595104	TATCAAGATTATTGAAA
chr1	63748462	63748463	chr1:63748463:C:T	rs2658396	C	T	T	SOX2_HMG_3	-9	0	-	0	0	.
chr1	64042136	64042137	chr1:64042137:G:A	rs918983616	G	A	G	SOX2_HMG_3	13	1	+	4.410313430302666	-2.4984413490125545	AGGAAATGGTAGTGATA
chr1	64063544	64063545	chr1:64063545:T:C	rs56027505	T	C	T	SOX2_HMG_3	26	0	+	0	0	.
chr1	64196740	64196741	chr1:64196741:A:G	rs12731793	A	G	A	SOX2_HMG_3	6	1	-	6.729572630385418	-0.17918214892980244	AAACAATGTTAGTGCTG
chr1	64267049	64267050	chr1:64267050:G:A	rs17126258	G	A	G	SOX2_HMG_3	27	0	-	0	0	.
chr1	64397957	64397958	chr1:64397958:T:C	rs75259955	T	C	C	SOX2_HMG_3	-6	0	+	0	0	.
chr1	64598261	64598262	chr1:64598262:G:A	rs151135115	G	A	G	SOX2_HMG_3	-8	0	+	0	0	.
chr1	64911476	64911477	chr1:64911477:G:A	rs61784740	G	A	G	SOX2_HMG_3	23	0	-	0	0	.
chr1	65430928	65430929	chr1:65430929:A:G	rs11208648	A	G	A	SOX2_HMG_3	18	0	+	0	0	.
chr1	65483256	65483257	chr1:65483257:C:A	rs12402567	C	A	c	SOX2_HMG_3	35	0	-	0	0	.
chr1	65633754	65633755	chr1:65633755:C:G	rs3206172	C	G	C	SOX2_HMG_3	34	0	-	0	0	.
chr1	65818052	65818053	chr1:65818053:C:T	rs4259616	C	T	C	SOX2_HMG_3	-6	0	-	0	0	.
chr1	65847113	65847114	chr1:65847114:A:G	rs4133072	A	G	A	SOX2_HMG_3	-13	0	-	0	0	.
chr1	65965333	65965334	chr1:65965334:T:A	rs12562632	T	A	T	SOX2_HMG_3	10	1	-	2.539746873288831	-4.36900790602639	CACCAATTTCACTGAAG
chr1	65999274	65999275	chr1:65999275:C:G	rs7548579	C	G	C	SOX2_HMG_3	0	1	-	2.074484982033531	1.329418080322208	GTGCATTGACAGTGATG
chr1	66155843	66155844	chr1:66155844:A:G	rs582237	A	G	A	SOX2_HMG_3	19	0	-	0	0	.
chr1	66181060	66181061	chr1:66181061:C:T	rs147257739	C	T	C	SOX2_HMG_3	28	0	-	0	0	.
chr1	66181096	66181097	chr1:66181097:C:A	rs782329	C	A	A	SOX2_HMG_3	-8	0	-	0	0	.
chr1	66270170	66270171	chr1:66270171:G:T	rs6688020	G	T	G	SOX2_HMG_3	-5	0	-	0	0	.
chr1	66311270	66311271	chr1:66311271:G:A	rs6690590	G	A	G	SOX2_HMG_3	35	0	+	0	0	.
chr1	66371597	66371598	chr1:66371598:C:T	rs150971744	C	T	C	SOX2_HMG_3	33	0	-	0	0	.
chr1	66449441	66449442	chr1:66449442:G:A	rs783435	G	A	G	SOX2_HMG_3	23	0	-	0	0	.
chr1	66477006	66477007	chr1:66477007:A:G	rs699248	A	G	A	SOX2_HMG_3	5	1	+	7.054751272866949	0.145996493551727	AATCAATGAAATTTAAT
chr1	66634625	66634626	chr1:66634626:T:C	rs6696812	T	C	T	SOX2_HMG_3	36	0	-	0	0	.
chr1	66669416	66669417	chr1:66669417:G:A	rs7536634	G	A	G	SOX2_HMG_3	29	0	-	0	0	.
chr1	67001489	67001490	chr1:67001490:C:G	rs76609130	C	G	C	SOX2_HMG_3	13	1	-	10.844397620587507	3.935642841272286	GTTCAATGTAAGTGAGA
chr1	67282078	67282079	chr1:67282079:A:G	rs11209035	A	G	G	SOX2_HMG_3	1	1	+	9.813449353449064	7.981801763369772	AAGCAATGGCATTGTAA
chr1	67462017	67462018	chr1:67462018:G:A	rs12136231	G	A	G	SOX2_HMG_3	24	0	-	0	0	.
chr1	67462026	67462027	chr1:67462027:A:G	rs10458560	A	G	A	SOX2_HMG_3	15	1	-	3.1959099786390195	0.35320082246216145	TGACAATGGGATTGTTG
chr1	67597706	67597707	chr1:67597707:G:C	rs55747525	G	C	G	SOX2_HMG_3	13	1	+	9.893100855801343	2.984346076486123	AATTAATTTTATTGATG
chr1	67690693	67690694	chr1:67690694:C:A	rs76477672	C	A	C	SOX2_HMG_3	-19	0	-	0	0	.
chr1	67886318	67886319	chr1:67886319:A:G	rs8179318	A	G	G	SOX2_HMG_3	36	0	-	0	0	.
chr1	68111865	68111866	chr1:68111866:A:G	rs142843721	A	G	A	SOX2_HMG_3	5	1	+	4.435169775114349	-2.473585004200872	ATTCAATTGAAGTGTAC
chr1	68155078	68155079	chr1:68155079:G:A	rs3762371	G	A	G	SOX2_HMG_3	16	1	-	6.2477459335923164	7.44451798673267	AGTGAATGTAATTGATC
chr1	68346436	68346437	chr1:68346437:G:T	rs35399029	G	T	G	SOX2_HMG_3	-17	0	-	0	0	.
chr1	68453573	68453574	chr1:68453574:G:A	rs3118429	G	A	G	SOX2_HMG_3	-15	0	-	0	0	.
chr1	68501775	68501776	chr1:68501776:C:G	rs11587365	C	G	C	SOX2_HMG_3	1	1	+	4.578090245729551	5.752486508173575	ACTAAATGAAATTGAAA
chr1	68847144	68847145	chr1:68847145:G:T	rs1388653	G	T	G	SOX2_HMG_3	20	0	+	0	0	.
chr1	68918834	68918835	chr1:68918835:G:C	rs4420133	G	C	C	SOX2_HMG_3	-7	0	-	0	0	.
chr1	69166897	69166898	chr1:69166898:T:C	rs12567267	T	C	T	SOX2_HMG_3	32	0	+	0	0	.
chr1	69425630	69425631	chr1:69425631:C:G	rs4650266	C	G	G	SOX2_HMG_3	-15	0	+	0	0	.
chr1	69649829	69649830	chr1:69649830:G:A	rs76696215	G	A	G	SOX2_HMG_3	-9	0	+	0	0	.
chr1	69879390	69879391	chr1:69879391:T:C	rs185163324	T	C	t	SOX2_HMG_3	11	1	+	3.8965383764273116	-2.7961531218050353	GATGAATGAAATTGGAG
chr1	69879411	69879412	chr1:69879412:G:C	rs2421306	G	C	C	SOX2_HMG_3	32	0	+	0	0	.
chr1	70220005	70220006	chr1:70220006:G:A	rs647872	G	A	A	SOX2_HMG_3	35	0	-	0	0	.
chr1	70297650	70297651	chr1:70297651:C:G	rs138692440	C	G	C	SOX2_HMG_3	-17	0	-	0	0	.
chr1	70449239	70449240	chr1:70449240:G:C	rs11590089	G	C	G	SOX2_HMG_3	-18	0	-	0	0	.
chr1	70863510	70863511	chr1:70863511:G:T	rs35897531	G	T	G	SOX2_HMG_3	3	1	-	3.0282365563599396	-3.880518222955279	GATCTATGATTTTGAAG
chr1	71053955	71053956	chr1:71053956:G:A	rs113123620	G	A	G	SOX2_HMG_3	6	1	+	1.021104321545744	1.021104321545744	GGCCAAGGGCAGTGAGA
chr1	71719532	71719533	chr1:71719533:G:T	rs11209830	G	T	G	SOX2_HMG_3	17	0	-	0	0	.
chr1	72062974	72062975	chr1:72062975:A:T	rs1486081	A	T	A	SOX2_HMG_3	10	1	+	2.7923917553938313	-4.116363023921389	AATCAATGGCACTAAAA
chr1	72284917	72284918	chr1:72284918:A:C	rs12090068	A	C	A	SOX2_HMG_3	18	0	-	0	0	.
chr1	72296917	72296918	chr1:72296918:G:C	rs115884978	G	C	G	SOX2_HMG_3	-17	0	-	0	0	.
chr1	72616787	72616788	chr1:72616788:T:C	rs12408420	T	C	T	SOX2_HMG_3	1	1	+	3.8666920597474146	3.8666920597474146	TTGCAATTGCATTGGTA
chr1	73567656	73567657	chr1:73567657:A:C	rs7542499	A	C	A	SOX2_HMG_3	-16	0	-	0	0	.
chr1	73759011	73759012	chr1:73759012:G:A	chr1:73759012:G:A	G	A	G	SOX2_HMG_3	25	0	+	0	0	.
chr1	73860694	73860695	chr1:73860695:G:A	rs17578595	G	A	A	SOX2_HMG_3	7	1	+	3.1430120709523677	0.41422495039103246	GATCTCTGCTATTGAAG
chr1	73860701	73860702	chr1:73860702:A:G	rs182086504	A	G	A	SOX2_HMG_3	14	1	+	3.1430120709523677	-1.038865546348752	GATCTCTGCTATTGAAG
chr1	73910618	73910619	chr1:73910619:A:G	chr1:73910619:A:G	A	G	A	SOX2_HMG_3	-13	0	-	0	0	.
chr1	74334400	74334401	chr1:74334401:G:T	rs17095150	G	T	G	SOX2_HMG_3	-16	0	+	0	0	.
chr1	75137944	75137945	chr1:75137945:T:C	rs12036667	T	C	T	SOX2_HMG_3	9	1	+	5.073569694171136	4.26689956023409	ACTCAATGCTGTTGTTA
chr1	75137948	75137949	chr1:75137949:G:T	rs7535534	G	T	G	SOX2_HMG_3	13	1	+	5.073569694171136	-1.8351850851440845	ACTCAATGCTGTTGTTA
chr1	75248868	75248869	chr1:75248869:T:C	rs649352	T	C	T	SOX2_HMG_3	18	0	+	0	0	.
chr1	75264322	75264323	chr1:75264323:T:A	rs79331054	T	A	T	SOX2_HMG_3	1	1	-	2.868405218875972	-0.13763863364734458	GATCAATGCCAATGGCT
chr1	75264329	75264330	chr1:75264330:G:A	rs79689913	G	A	G	SOX2_HMG_3	-6	0	-	0	0	.
chr1	75887608	75887609	chr1:75887609:T:C	rs12124417	T	C	t	SOX2_HMG_3	11	1	+	2.0230127286963437	-4.669678769536002	ACTCCATGTTATAGATG
chr1	76095846	76095847	chr1:76095847:G:A	rs289678	G	A	A	SOX2_HMG_3	-2	0	+	0	0	.
chr1	76227681	76227682	chr1:76227682:C:T	rs10493588	C	T	C	SOX2_HMG_3	-4	0	-	0	0	.
chr1	76234302	76234303	chr1:76234303:C:G	rs960582936	C	G	C	SOX2_HMG_3	-11	0	+	0	0	.
chr1	76319707	76319708	chr1:76319708:C:T	rs4421636	C	T	C	SOX2_HMG_3	35	0	+	0	0	.
chr1	76388635	76388636	chr1:76388636:T:G	rs10873883	T	G	T	SOX2_HMG_3	32	0	-	0	0	.
chr1	76525481	76525482	chr1:76525482:T:C	rs315088	T	C	T	SOX2_HMG_3	-16	0	+	0	0	.
chr1	77032224	77032225	chr1:77032225:C:A	rs7540333	C	A	C	SOX2_HMG_3	17	0	+	0	0	.
chr1	77230391	77230392	chr1:77230392:A:G	rs12129330	A	G	A	SOX2_HMG_3	24	0	+	0	0	.
chr1	77343214	77343215	chr1:77343215:G:A	rs12125503	G	A	G	SOX2_HMG_3	29	0	-	0	0	.
chr1	77650717	77650718	chr1:77650718:A:G	rs278837	A	G	A	SOX2_HMG_3	-9	0	+	0	0	.
chr1	78340250	78340251	chr1:78340251:C:T	rs111318827	C	T	C	SOX2_HMG_3	29	0	+	0	0	.
chr1	78660358	78660359	chr1:78660359:C:T	rs2296717	C	T	C	SOX2_HMG_3	17	0	+	0	0	.
chr1	78666354	78666355	chr1:78666355:G:T	rs72935648	G	T	G	SOX2_HMG_3	10	1	+	6.859830442454845	6.859830442454845	GATCAATTGTGTTGACA
chr1	78758419	78758420	chr1:78758420:G:A	rs17400982	G	A	g	SOX2_HMG_3	-1	0	-	0	0	.
chr1	78938065	78938066	chr1:78938066:T:G	rs985277	T	G	T	SOX2_HMG_3	2	1	+	10.559447734406438	6.691832899728397	GCTCAATTATATTGAGT
chr1	79575471	79575472	chr1:79575472:G:T	rs115247832	G	T	G	SOX2_HMG_3	-11	0	+	0	0	.
chr1	79575563	79575564	chr1:79575564:G:T	rs116666196	G	T	G	SOX2_HMG_3	-15	0	+	0	0	.
chr1	79777635	79777636	chr1:79777636:C:T	rs55658731	C	T	c	SOX2_HMG_3	18	0	-	0	0	.
chr1	79777636	79777637	chr1:79777637:T:G	rs55800905	T	G	G	SOX2_HMG_3	17	0	-	0	0	.
chr1	79900156	79900157	chr1:79900157:A:G	rs80266529	A	G	A	SOX2_HMG_3	-10	0	-	0	0	.
chr1	79983116	79983117	chr1:79983117:T:C	rs12124992	T	C	C	SOX2_HMG_3	-12	0	-	0	0	.
chr1	80047567	80047568	chr1:80047568:A:C	rs12733070	A	C	A	SOX2_HMG_3	10	1	+	5.06967840387041	-1.8390763754448105	GCTCAATTTTATGGAAT
chr1	80251042	80251043	chr1:80251043:C:T	rs140505150	C	T	C	SOX2_HMG_3	-11	0	+	0	0	.
chr1	80536341	80536342	chr1:80536342:A:G	rs117214382	A	G	A	SOX2_HMG_3	6	1	-	6.934516598723553	0.02576181940833311	GATTAATAATATTGAAA
chr1	80582964	80582965	chr1:80582965:C:A	rs17399290	C	A	C	SOX2_HMG_3	18	0	-	0	0	.
chr1	80776377	80776378	chr1:80776378:A:T	rs6664492	A	T	A	SOX2_HMG_3	-12	0	-	0	0	.
chr1	80992517	80992518	chr1:80992518:G:A	rs11163180	G	A	A	SOX2_HMG_3	-15	0	+	0	0	.
chr1	81315258	81315259	chr1:81315259:A:G	rs17106399	A	G	A	SOX2_HMG_3	12	1	-	5.0998916264757	-1.8088631528395198	ATCCAATGATATTGTAT
chr1	81391167	81391168	chr1:81391168:T:C	rs7521051	T	C	T	SOX2_HMG_3	5	1	-	6.0055744265375814	-0.9031803527776392	AATCAATTTTGGTGAGT
chr1	81406567	81406568	chr1:81406568:C:T	rs945425806	C	T	C	SOX2_HMG_3	27	0	-	0	0	.
chr1	81408183	81408184	chr1:81408184:A:G	rs11808193	A	G	A	SOX2_HMG_3	-6	0	+	0	0	.
chr1	81478793	81478794	chr1:81478794:A:G	rs5021120	A	G	A	SOX2_HMG_3	4	1	+	1.973995549138275	-4.934759230176946	GATCAGTGTAAGTTATG
chr1	81547950	81547951	chr1:81547951:T:C	rs1039072173	T	C	T	SOX2_HMG_3	16	1	+	6.662592014601645	5.465819961461292	CATCAATGTTATTTTAT
chr1	81719768	81719769	chr1:81719769:A:G	rs78748682	A	G	A	SOX2_HMG_3	10	1	+	3.0784605038325665	-3.830294275482654	GCCCAATGCTAGTGGAA
chr1	81731708	81731709	chr1:81731709:A:G	rs113011158	A	G	A	SOX2_HMG_3	19	0	-	0	0	.
chr1	82063927	82063928	chr1:82063928:C:T	rs12562339	C	T	T	SOX2_HMG_3	34	0	+	0	0	.
chr1	82109114	82109115	chr1:82109115:T:G	rs4970668	T	G	T	SOX2_HMG_3	14	1	-	5.744770968331663	-1.08752773723503	ACTCAATGCCATTCAAA
chr1	82306631	82306632	chr1:82306632:C:T	rs7413734	C	T	C	SOX2_HMG_3	-6	0	+	0	0	.
chr1	82307167	82307168	chr1:82307168:T:C	rs77509326	T	C	T	SOX2_HMG_3	6	1	+	5.793950024597505	-1.1148047547177156	GATCAATGTGAGTGGAG
chr1	82502554	82502555	chr1:82502555:C:G	rs7544706	C	G	G	SOX2_HMG_3	21	0	+	0	0	.
chr1	83087339	83087340	chr1:83087340:A:C	rs12740512	A	C	A	SOX2_HMG_3	5	1	-	2.9152491571240917	2.9152491571240917	TATCATTGGCATTGGAC
chr1	83748171	83748172	chr1:83748172:G:A	rs12724410	G	A	G	SOX2_HMG_3	23	0	+	0	0	.
chr1	83827429	83827430	chr1:83827430:C:T	rs12135529	C	T	C	SOX2_HMG_3	-12	0	-	0	0	.
chr1	83849598	83849599	chr1:83849599:T:C	rs188785817	T	C	T	SOX2_HMG_3	6	1	+	8.483291890336137	1.5745371110209168	AATCAATAGAAGTGTAA
chr1	83962023	83962024	chr1:83962024:G:C	rs942848	G	C	G	SOX2_HMG_3	18	0	-	0	0	.
chr1	83997444	83997445	chr1:83997445:G:A	rs558567	G	A	G	SOX2_HMG_3	26	0	+	0	0	.
chr1	84165201	84165202	chr1:84165202:G:A	rs2642182	G	A	G	SOX2_HMG_3	27	0	-	0	0	.
chr1	84171666	84171667	chr1:84171667:A:G	rs61360062	A	G	A	SOX2_HMG_3	-7	0	-	0	0	.
chr1	84225643	84225644	chr1:84225644:A:G	rs11163916	A	G	A	SOX2_HMG_3	-12	0	+	0	0	.
chr1	84433503	84433504	chr1:84433504:C:A	chr1:84433504:C:A	C	A	C	SOX2_HMG_3	20	0	-	0	0	.
chr1	84520355	84520356	chr1:84520356:C:T	rs925740	C	T	C	SOX2_HMG_3	24	0	-	0	0	.
chr1	84757792	84757793	chr1:84757793:G:A	rs12733380	G	A	G	SOX2_HMG_3	-2	0	-	0	0	.
chr1	85171964	85171965	chr1:85171965:A:G	rs817432	A	G	G	SOX2_HMG_3	-19	0	+	0	0	.
chr1	85229970	85229971	chr1:85229971:T:C	rs2153528	T	C	C	SOX2_HMG_3	23	0	-	0	0	.
chr1	85317417	85317418	chr1:85317418:T:C	rs233109	T	C	C	SOX2_HMG_3	5	1	+	5.201455509548863	5.201455509548863	CATCATTGCCAGTGACA
chr1	85322806	85322807	chr1:85322807:A:C	rs233120	A	C	C	SOX2_HMG_3	30	0	+	0	0	.
chr1	85372821	85372822	chr1:85372822:T:G	rs140056707	T	G	T	SOX2_HMG_3	-14	0	-	0	0	.
chr1	85484636	85484637	chr1:85484637:G:C	rs17127802	G	C	G	SOX2_HMG_3	-20	0	+	0	0	.
chr1	86035761	86035762	chr1:86035762:C:T	rs71506583	C	T	C	SOX2_HMG_3	-13	0	-	0	0	.
chr1	86313438	86313439	chr1:86313439:T:C	rs1575415	T	C	T	SOX2_HMG_3	26	0	+	0	0	.
chr1	86380269	86380270	chr1:86380270:G:A	rs114030321	G	A	G	SOX2_HMG_3	-19	0	-	0	0	.
chr1	86486640	86486641	chr1:86486641:A:G	rs2734705	A	G	G	SOX2_HMG_3	-16	0	+	0	0	.
chr1	86788430	86788431	chr1:86788431:G:A	rs369220391	G	A	G	SOX2_HMG_3	26	0	+	0	0	.
chr1	87045136	87045137	chr1:87045137:A:G	rs142472058	A	G	A	SOX2_HMG_3	18	0	-	0	0	.
chr1	87121578	87121579	chr1:87121579:G:A	rs141425673	G	A	G	SOX2_HMG_3	-14	0	+	0	0	.
chr1	87678460	87678461	chr1:87678461:T:C	rs142143873	T	C	T	SOX2_HMG_3	-12	0	-	0	0	.
chr1	87817023	87817024	chr1:87817024:C:T	rs2436980	C	T	T	SOX2_HMG_3	30	0	+	0	0	.
chr1	87880465	87880466	chr1:87880466:G:C	rs1413532	G	C	G	SOX2_HMG_3	-17	0	+	0	0	.
chr1	88001744	88001745	chr1:88001745:C:T	rs9787004	C	T	T	SOX2_HMG_3	33	0	+	0	0	.
chr1	88276296	88276297	chr1:88276297:C:T	rs115590681	C	T	C	SOX2_HMG_3	32	0	+	0	0	.
chr1	88336328	88336329	chr1:88336329:A:G	rs2179965	A	G	A	SOX2_HMG_3	6	1	-	2.7007532915940757	-4.208001487721146	GCTAAATGGAATTGGTA
chr1	88502107	88502108	chr1:88502108:G:C	rs387972	G	C	c	SOX2_HMG_3	-10	0	+	0	0	.
chr1	88803160	88803161	chr1:88803161:C:T	rs149057939	C	T	C	SOX2_HMG_3	29	0	-	0	0	.
chr1	88884340	88884341	chr1:88884341:G:C	rs56035308	G	C	G	SOX2_HMG_3	34	0	-	0	0	.
chr1	89128991	89128992	chr1:89128992:A:T	rs115705250	A	T	T	SOX2_HMG_3	5	1	+	6.714744882916112	-0.19400989639910837	TGACAATGAAAGTGAAA
chr1	89165912	89165913	chr1:89165913:C:T	rs590617	C	T	T	SOX2_HMG_3	-12	0	+	0	0	.
chr1	89524126	89524127	chr1:89524127:T:C	rs1051151384	T	C	T	SOX2_HMG_3	6	1	+	6.183610889182447	-0.7251438901327742	AGCCAATGGTATTGGAA
chr1	89524129	89524130	chr1:89524130:T:A	rs190484433	T	A	T	SOX2_HMG_3	9	1	+	6.183610889182447	4.325035547235718	AGCCAATGGTATTGGAA
chr1	89524151	89524152	chr1:89524152:T:G	chr1:89524152:T:G	T	G	T	SOX2_HMG_3	31	0	+	0	0	.
chr1	89755881	89755882	chr1:89755882:C:T	rs580251	C	T	C	SOX2_HMG_3	2	1	-	1.820096865785201	1.820096865785201	GAGCACTGCTAGTGGTG
chr1	89815306	89815307	chr1:89815307:C:T	rs189065878	C	T	C	SOX2_HMG_3	32	0	+	0	0	.
chr1	90067207	90067208	chr1:90067208:C:T	rs7542860	C	T	T	SOX2_HMG_3	3	1	+	4.3452569829905405	-2.56349779632468	TAGCAAGGGTAGTGAAA
chr1	90764051	90764052	chr1:90764052:G:A	rs60908826	G	A	G	SOX2_HMG_3	0	1	-	4.714884316118721	4.5775553380700575	CGGCAATGAAAGTGACT
chr1	91136608	91136609	chr1:91136609:A:G	rs346991	A	G	G	SOX2_HMG_3	19	0	-	0	0	.
chr1	91635948	91635949	chr1:91635949:G:T	rs78695552	G	T	G	SOX2_HMG_3	-13	0	-	0	0	.
chr1	91683538	91683539	chr1:91683539:C:T	rs1805116	C	T	C	SOX2_HMG_3	27	0	+	0	0	.
chr1	91684278	91684279	chr1:91684279:C:A	rs913059	C	A	A	SOX2_HMG_3	3	1	+	3.435805076802001	-3.4729497025132194	TTTCAATTGTAGTTAAG
chr1	91916936	91916937	chr1:91916937:A:G	rs6674287	A	G	A	SOX2_HMG_3	-10	0	+	0	0	.
chr1	92641850	92641851	chr1:92641851:C:T	rs12025792	C	T	C	SOX2_HMG_3	-11	0	-	0	0	.
chr1	92787446	92787447	chr1:92787447:C:T	rs1535372	C	T	C	SOX2_HMG_3	-18	0	-	0	0	.
chr1	93179624	93179625	chr1:93179625:C:T	rs1335679	C	T	T	SOX2_HMG_3	30	0	+	0	0	.
chr1	93341159	93341160	chr1:93341160:T:C	rs954946726	T	C	T	SOX2_HMG_3	26	0	-	0	0	.
chr1	93347872	93347873	chr1:93347873:T:C	rs771464	T	C	C	SOX2_HMG_3	-11	0	+	0	0	.
chr1	93711366	93711367	chr1:93711367:A:G	chr1:93711367:A:G	A	G	A	SOX2_HMG_3	2	1	+	7.5971407626761	7.5971407626761	GGACAATGAAAGTGAAA
chr1	93775123	93775124	chr1:93775124:G:A	rs11164980	G	A	G	SOX2_HMG_3	-5	0	+	0	0	.
chr1	93848597	93848598	chr1:93848598:T:C	rs78969815	T	C	T	SOX2_HMG_3	-7	0	+	0	0	.
chr1	93848598	93848599	chr1:93848599:C:T	rs11165019	C	T	C	SOX2_HMG_3	-6	0	+	0	0	.
chr1	93976393	93976394	chr1:93976394:T:C	rs743117	T	C	C	SOX2_HMG_3	29	0	-	0	0	.
chr1	94111411	94111412	chr1:94111412:T:C	rs2297634	T	C	C	SOX2_HMG_3	32	0	-	0	0	.
chr1	94180789	94180790	chr1:94180790:T:C	rs17111205	T	C	T	SOX2_HMG_3	-14	0	-	0	0	.
chr1	94359106	94359107	chr1:94359107:C:T	rs12064428	C	T	C	SOX2_HMG_3	3	1	+	5.084128526717702	-1.8246262525975172	GAACAGTGATAGTGATT
chr1	94359107	94359108	chr1:94359108:A:G	rs2786906	A	G	G	SOX2_HMG_3	4	1	+	5.084128526717702	-1.8246262525975172	GAACAGTGATAGTGATT
chr1	94417295	94417296	chr1:94417296:A:G	rs150767789	A	G	G	SOX2_HMG_3	-1	0	+	0	0	.
chr1	94417777	94417778	chr1:94417778:A:G	rs1422956683	A	G	A	SOX2_HMG_3	17	0	+	0	0	.
chr1	94536293	94536294	chr1:94536294:T:C	chr1:94536294:T:C	T	C	T	SOX2_HMG_3	20	0	+	0	0	.
chr1	94597766	94597767	chr1:94597767:A:G	rs75745687	A	G	A	SOX2_HMG_3	10	1	+	1.6707947746477636	-5.237960004667457	GGTCAAAGGCATGGATT
chr1	94634202	94634203	chr1:94634203:C:T	rs9645363	C	T	C	SOX2_HMG_3	1	1	-	4.868353642114764	6.700001232194055	GGGCAATAAAAGTGAAA
chr1	94683281	94683282	chr1:94683282:G:A	rs12739283	G	A	G	SOX2_HMG_3	25	0	+	0	0	.
chr1	94884485	94884486	chr1:94884486:A:C	rs117424936	A	C	A	SOX2_HMG_3	-4	0	+	0	0	.
chr1	94928795	94928796	chr1:94928796:T:A	rs1132	T	A	A	SOX2_HMG_3	-2	0	-	0	0	.
chr1	95316515	95316516	chr1:95316516:A:G	rs11165375	A	G	A	SOX2_HMG_3	-11	0	-	0	0	.
chr1	95375309	95375310	chr1:95375310:A:C	rs6680011	A	C	A	SOX2_HMG_3	-2	0	+	0	0	.
chr1	95532579	95532580	chr1:95532580:C:T	rs78388303	C	T	C	SOX2_HMG_3	-1	0	-	0	0	.
chr1	95842439	95842440	chr1:95842440:A:G	rs11165501	A	G	A	SOX2_HMG_3	-4	0	+	0	0	.
chr1	95912065	95912066	chr1:95912066:A:C	rs34830765	A	C	A	SOX2_HMG_3	34	0	+	0	0	.
chr1	96004628	96004629	chr1:96004629:A:C	rs321252	A	C	C	SOX2_HMG_3	18	0	-	0	0	.
chr1	96037013	96037014	chr1:96037014:C:G	rs161111	C	G	C	SOX2_HMG_3	19	0	+	0	0	.
chr1	96249439	96249440	chr1:96249440:T:C	rs324860	T	C	T	SOX2_HMG_3	-5	0	-	0	0	.
chr1	96327760	96327761	chr1:96327761:C:T	rs17114927	C	T	T	SOX2_HMG_3	26	0	+	0	0	.
chr1	96327767	96327768	chr1:96327768:T:A	rs34949297	T	A	A	SOX2_HMG_3	33	0	+	0	0	.
chr1	97042568	97042569	chr1:97042569:C:T	rs563268732	C	T	C	SOX2_HMG_3	-6	0	+	0	0	.
chr1	97053414	97053415	chr1:97053415:C:T	rs77461788	C	T	C	SOX2_HMG_3	35	0	-	0	0	.
chr1	97070502	97070503	chr1:97070503:T:C	rs535789218	T	C	T	SOX2_HMG_3	-12	0	+	0	0	.
chr1	97278248	97278249	chr1:97278249:A:T	rs641805	A	T	A	SOX2_HMG_3	25	0	+	0	0	.
chr1	97368462	97368463	chr1:97368463:C:T	rs1879371	C	T	T	SOX2_HMG_3	29	0	-	0	0	.
chr1	97554186	97554187	chr1:97554187:T:C	rs1031624407	T	C	T	SOX2_HMG_3	-13	0	+	0	0	.
chr1	97693016	97693017	chr1:97693017:G:A	rs72977714	G	A	G	SOX2_HMG_3	30	0	+	0	0	.
chr1	97845086	97845087	chr1:97845087:C:T	rs116072346	C	T	C	SOX2_HMG_3	-20	0	+	0	0	.
chr1	98749445	98749446	chr1:98749446:A:T	rs67694167	A	T	A	SOX2_HMG_3	-5	0	-	0	0	.
chr1	98950545	98950546	chr1:98950546:G:T	rs309083	G	T	T	SOX2_HMG_3	-8	0	+	0	0	.
chr1	99279603	99279604	chr1:99279604:G:A	rs149119493	G	A	G	SOX2_HMG_3	-11	0	+	0	0	.
chr1	99599042	99599043	chr1:99599043:A:G	rs6577389	A	G	G	SOX2_HMG_3	-13	0	-	0	0	.
chr1	99691260	99691261	chr1:99691261:T:C	rs7514151	T	C	T	SOX2_HMG_3	20	0	+	0	0	.
chr1	100045298	100045299	chr1:100045299:T:G	rs834277	T	G	G	SOX2_HMG_3	-16	0	+	0	0	.
chr1	100045325	100045326	chr1:100045326:T:C	rs834278	T	C	C	SOX2_HMG_3	11	1	+	5.733588130770092	-0.9591033674622549	TAGCAGTGCTATTGATT
chr1	100354130	100354131	chr1:100354131:G:A	chr1:100354131:G:A	G	A	G	SOX2_HMG_3	26	0	-	0	0	.
chr1	100354132	100354133	chr1:100354133:C:G	rs149981742	C	G	C	SOX2_HMG_3	24	0	-	0	0	.
chr1	100354168	100354169	chr1:100354169:T:C	rs572059964	T	C	T	SOX2_HMG_3	-12	0	-	0	0	.
chr1	100585130	100585131	chr1:100585131:C:A	rs193056840	C	A	C	SOX2_HMG_3	18	0	+	0	0	.
chr1	100625040	100625041	chr1:100625041:C:T	rs2783690	C	T	T	SOX2_HMG_3	8	1	+	3.5530425230640095	4.4247788756998725	AATCATTACAAGTGAAA
chr1	100747778	100747779	chr1:100747779:A:T	rs10493936	A	T	A	SOX2_HMG_3	2	1	+	7.398923962418817	11.266538797096857	TCACAATGATAGTGAAA
chr1	101107851	101107852	chr1:101107852:C:T	rs12727236	C	T	C	SOX2_HMG_3	20	0	+	0	0	.
chr1	101199077	101199078	chr1:101199078:T:C	rs34792655	T	C	T	SOX2_HMG_3	31	0	-	0	0	.
chr1	101199087	101199088	chr1:101199088:T:C	rs10875357	T	C	T	SOX2_HMG_3	21	0	-	0	0	.
chr1	101308089	101308090	chr1:101308090:G:C	rs12042608	G	C	g	SOX2_HMG_3	23	0	+	0	0	.
chr1	101398936	101398937	chr1:101398937:C:T	rs12408470	C	T	C	SOX2_HMG_3	-20	0	+	0	0	.
chr1	101398989	101398990	chr1:101398990:T:A	rs114539337	T	A	T	SOX2_HMG_3	33	0	+	0	0	.
chr1	101399455	101399456	chr1:101399456:C:T	rs12041998	C	T	C	SOX2_HMG_3	-5	0	-	0	0	.
chr1	102085460	102085461	chr1:102085461:T:C	rs55825283	T	C	T	SOX2_HMG_3	-17	0	-	0	0	.
chr1	102627862	102627863	chr1:102627863:A:G	rs932175	A	G	A	SOX2_HMG_3	26	0	+	0	0	.
chr1	102726671	102726672	chr1:102726672:A:G	rs74834876	A	G	A	SOX2_HMG_3	-20	0	-	0	0	.
chr1	102892721	102892722	chr1:102892722:T:C	rs962453	T	C	T	SOX2_HMG_3	14	1	+	3.3232507237864666	-0.7962741369659321	TAACAATGGTATTTTAG
chr1	103563012	103563013	chr1:103563013:A:G	rs17014913	A	G	A	SOX2_HMG_3	-10	0	+	0	0	.
chr1	104031074	104031075	chr1:104031075:G:A	rs12759387	G	A	G	SOX2_HMG_3	-6	0	-	0	0	.
chr1	104360242	104360243	chr1:104360243:G:A	rs9660297	G	A	G	SOX2_HMG_3	-5	0	+	0	0	.
chr1	104463896	104463897	chr1:104463897:G:A	rs1115851	G	A	G	SOX2_HMG_3	23	0	-	0	0	.
chr1	104539371	104539372	chr1:104539372:T:C	rs17021664	T	C	T	SOX2_HMG_3	20	0	+	0	0	.
chr1	104561058	104561059	chr1:104561059:A:G	rs1597177	A	G	a	SOX2_HMG_3	6	1	-	10.469903580026406	3.561148800711185	TTTCAATGGAATTGTTG
chr1	105088331	105088332	chr1:105088332:C:A	rs7416477	C	A	A	SOX2_HMG_3	-14	0	+	0	0	.
chr1	105556474	105556475	chr1:105556475:A:C	rs777080	A	C	A	SOX2_HMG_3	-8	0	+	0	0	.
chr1	105655817	105655818	chr1:105655818:C:A	rs1361465	C	A	C	SOX2_HMG_3	-8	0	+	0	0	.
chr1	106413436	106413437	chr1:106413437:A:C	rs12067715	A	C	A	SOX2_HMG_3	-19	0	-	0	0	.
chr1	106498357	106498358	chr1:106498358:T:C	rs114910083	T	C	T	SOX2_HMG_3	16	1	-	5.0494531473014375	5.323140763691709	GTTAAATGATATTGACA
chr1	106573948	106573949	chr1:106573949:T:C	rs10881421	T	C	C	SOX2_HMG_3	14	1	+	3.709276247699972	-0.41024861305242655	GTTTAATGCAATTGTTG
chr1	106705866	106705867	chr1:106705867:T:C	rs4244116	T	C	C	SOX2_HMG_3	36	0	+	0	0	.
chr1	107183120	107183121	chr1:107183121:C:A	rs4311917	C	A	C	SOX2_HMG_3	31	0	-	0	0	.
chr1	107596902	107596903	chr1:107596903:G:A	rs17536557	G	A	G	SOX2_HMG_3	0	1	+	4.95233842100367	4.731744141918377	GGTCAATGTAATTCTTT
chr1	108153179	108153180	chr1:108153180:T:C	rs1020172	T	C	C	SOX2_HMG_3	16	1	-	3.844383891553612	4.118071507943883	TATCATTGACAGTGTAA
chr1	108646628	108646629	chr1:108646629:C:T	rs762766728	C	T	G	SOX2_HMG_3	27	0	+	0	0	.
chr1	108709193	108709194	chr1:108709194:T:C	rs72980738	T	C	T	SOX2_HMG_3	-13	0	-	0	0	.
chr1	108842840	108842841	chr1:108842841:A:C	rs12075148	A	C	A	SOX2_HMG_3	4	1	+	3.845592582950067	-3.0631621963651527	AACCAATTATAATGATA
chr1	108862494	108862495	chr1:108862495:G:C	rs12134042	G	C	G	SOX2_HMG_3	3	1	-	3.4379050606755004	-3.47084971863972	AAGCAATGATATTTACT
chr1	109197505	109197506	chr1:109197506:C:G	rs61756684	C	G	C	SOX2_HMG_3	7	1	-	2.978093047384393	-3.754749164051581	GGTCAGTGACATTGTCG
chr1	109469078	109469079	chr1:109469079:G:A	rs2152924	G	A	G	SOX2_HMG_3	21	0	-	0	0	.
chr1	109549795	109549796	chr1:109549796:G:A	rs114984281	G	A	G	SOX2_HMG_3	-13	0	-	0	0	.
chr1	109568205	109568206	chr1:109568206:C:T	rs17023593	C	T	C	SOX2_HMG_3	34	0	+	0	0	.
chr1	109970739	109970740	chr1:109970740:T:A	rs114831731	T	A	T	SOX2_HMG_3	4	1	-	2.0303816331184565	-4.878373146196764	GAGCAAGGGTATTGGGA
chr1	109980601	109980602	chr1:109980602:A:G	chr1:109980602:A:G	A	G	A	SOX2_HMG_3	2	1	+	4.905478131515936	4.905478131515936	TTACAATGTCAGTGGTG
chr1	110236461	110236462	chr1:110236462:A:G	rs11102066	A	G	A	SOX2_HMG_3	6	1	-	6.296980396062963	-0.6117743832522569	AATCAATTGCAGTTAAG
chr1	110330546	110330547	chr1:110330547:T:C	rs12135320	T	C	T	SOX2_HMG_3	-7	0	-	0	0	.
chr1	110346815	110346816	chr1:110346816:G:A	rs12143620	G	A	G	SOX2_HMG_3	24	0	+	0	0	.
chr1	110633364	110633365	chr1:110633365:A:C	rs884217	A	C	A	SOX2_HMG_3	2	1	+	4.539680050707496	3.4039228150699476	CCACCATGTTATTGATG
chr1	110634713	110634714	chr1:110634714:G:A	rs148254323	G	A	G	SOX2_HMG_3	3	1	-	2.246601087471834	-4.662153691843386	CATCAAGGTCACTGAGG
chr1	110714556	110714557	chr1:110714557:A:T	rs12074788	A	T	A	SOX2_HMG_3	10	1	+	4.956576907830055	-1.952177871485167	AATCATTTTCAGTGTTG
chr1	110724687	110724688	chr1:110724688:G:A	rs343608	G	A	G	SOX2_HMG_3	-7	0	+	0	0	.
chr1	110756583	110756584	chr1:110756584:T:A	rs72683708	T	A	T	SOX2_HMG_3	13	1	-	5.903683070129505	5.903683070129505	ATTCAATGACATTAAAG
chr1	111085896	111085897	chr1:111085897:G:A	rs56200127	G	A	G	SOX2_HMG_3	-1	0	+	0	0	.
chr1	111141049	111141050	chr1:111141050:A:G	rs142775180	A	G	A	SOX2_HMG_3	19	0	+	0	0	.
chr1	111211993	111211994	chr1:111211994:T:C	rs2783442	T	C	T	SOX2_HMG_3	25	0	+	0	0	.
chr1	111379105	111379106	chr1:111379106:C:T	rs79729651	C	T	C	SOX2_HMG_3	25	0	-	0	0	.
chr1	111463205	111463206	chr1:111463206:T:C	rs114580450	T	C	T	SOX2_HMG_3	-2	0	-	0	0	.
chr1	111463222	111463223	chr1:111463223:C:G	rs78160095	C	G	C	SOX2_HMG_3	-19	0	-	0	0	.
chr1	111499572	111499573	chr1:111499573:T:C	rs1415792	T	C	C	SOX2_HMG_3	9	1	+	2.893622077735838	2.086951943798792	CCACAATGGTATGGAAA
chr1	111508083	111508084	chr1:111508084:G:A	rs755335344	G	A	G	SOX2_HMG_3	24	0	+	0	0	.
chr1	111536103	111536104	chr1:111536104:T:C	rs2798565	T	C	C	SOX2_HMG_3	-14	0	-	0	0	.
chr1	111593335	111593336	chr1:111593336:T:C	rs1890548	T	C	C	SOX2_HMG_3	-1	0	-	0	0	.
chr1	111594060	111594061	chr1:111594061:C:T	rs6537711	C	T	C	SOX2_HMG_3	18	0	-	0	0	.
chr1	111656549	111656550	chr1:111656550:T:G	rs750715701	T	G	T	SOX2_HMG_3	29	0	-	0	0	.
chr1	111778409	111778410	chr1:111778410:T:A	rs640029	T	A	T	SOX2_HMG_3	2	1	+	4.386123510159358	0.5185086754813164	CATCAATTGAATTTTTA
chr1	111937579	111937580	chr1:111937580:G:C	rs4838928	G	C	C	SOX2_HMG_3	-20	0	+	0	0	.
chr1	111937580	111937581	chr1:111937581:C:T	rs2995812	C	T	T	SOX2_HMG_3	-19	0	+	0	0	.
chr1	112111045	112111046	chr1:112111046:T:C	rs462936	T	C	C	SOX2_HMG_3	-14	0	+	0	0	.
chr1	112626826	112626827	chr1:112626827:G:A	rs7415820	G	A	G	SOX2_HMG_3	1	1	+	2.5062087795135586	4.33785636959285	AGGCAGTGTCAGTGAAA
chr1	112879722	112879723	chr1:112879723:G:C	rs189962983	G	C	G	SOX2_HMG_3	29	0	-	0	0	.
chr1	113125721	113125722	chr1:113125722:G:A	rs10494150	G	A	G	SOX2_HMG_3	30	0	-	0	0	.
chr1	113297931	113297932	chr1:113297932:C:T	rs61817469	C	T	C	SOX2_HMG_3	16	1	-	2.2765370820825472	2.002849465692276	AATCAATGGGAGAGAGG
chr1	113572094	113572095	chr1:113572095:T:C	rs2884704	T	C	T	SOX2_HMG_3	-14	0	+	0	0	.
chr1	113742726	113742727	chr1:113742727:G:A	rs74713505	G	A	G	SOX2_HMG_3	0	1	+	4.556000818038919	4.335406538953626	GGTAAATGAAAGTGAAA
chr1	113991831	113991832	chr1:113991832:A:G	rs872661	A	G	A	SOX2_HMG_3	5	1	+	6.148195441563582	-0.760559337751638	TAGCAATGATATTAATA
chr1	114131963	114131964	chr1:114131964:C:G	rs115943992	C	G	C	SOX2_HMG_3	27	0	+	0	0	.
chr1	114558549	114558550	chr1:114558550:G:A	rs4839384	G	A	G	SOX2_HMG_3	-14	0	+	0	0	.
chr1	114581930	114581931	chr1:114581931:C:T	rs529234780	C	T	C	SOX2_HMG_3	-16	0	-	0	0	.
chr1	115052717	115052718	chr1:115052718:C:A	rs113587983	C	A	C	SOX2_HMG_3	16	1	-	5.294410881975839	4.491340440199649	AGGCAATGGCATAGATG
chr1	115052731	115052732	chr1:115052732:C:T	rs112518329	C	T	C	SOX2_HMG_3	2	1	-	5.294410881975839	5.294410881975839	AGGCAATGGCATAGATG
chr1	115063689	115063690	chr1:115063690:T:A	rs1000552036	T	A	T	SOX2_HMG_3	27	0	+	0	0	.
chr1	115144644	115144645	chr1:115144645:C:T	rs7528116	C	T	C	SOX2_HMG_3	27	0	+	0	0	.
chr1	115331082	115331083	chr1:115331083:A:G	rs146963439	A	G	A	SOX2_HMG_3	5	1	+	2.2816971795856977	-4.627057599729522	CTGCAATGTCAATGAGG
chr1	115437350	115437351	chr1:115437351:C:T	rs750403	C	T	C	SOX2_HMG_3	10	1	-	3.6218941846750625	10.530648963990284	AAACAATTATGGTGATG
chr1	115462086	115462087	chr1:115462087:G:A	rs531818616	G	A	G	SOX2_HMG_3	-7	0	-	0	0	.
chr1	115671657	115671658	chr1:115671658:A:G	rs10801913	A	G	G	SOX2_HMG_3	-15	0	-	0	0	.
chr1	115715379	115715380	chr1:115715380:G:A	rs74226092	G	A	G	SOX2_HMG_3	-20	0	+	0	0	.
chr1	115745012	115745013	chr1:115745013:A:G	rs10801969	A	G	A	SOX2_HMG_3	22	0	+	0	0	.
chr1	116106844	116106845	chr1:116106845:A:G	rs79777502	A	G	A	SOX2_HMG_3	-15	0	-	0	0	.
chr1	116170271	116170272	chr1:116170272:C:T	rs10737764	C	T	T	SOX2_HMG_3	2	1	-	1.5334096430915167	1.5334096430915167	GAGCAAAAGCAGTGAGG
chr1	116276548	116276549	chr1:116276549:A:G	rs12091433	A	G	A	SOX2_HMG_3	27	0	+	0	0	.
chr1	116478013	116478014	chr1:116478014:C:T	rs115584071	C	T	C	SOX2_HMG_3	0	1	-	3.081742490048158	2.861148210962864	GGTCCATGGTAGTGGAA
chr1	116834066	116834067	chr1:116834067:A:G	rs2767327	A	G	A	SOX2_HMG_3	6	1	-	1.9806268753644742	-4.928127903950745	TGACAATGGCAGAGAAG
chr1	117001793	117001794	chr1:117001794:C:T	rs374341961	C	T	C	SOX2_HMG_3	26	0	+	0	0	.
chr1	117003941	117003942	chr1:117003942:A:T	rs75378515	A	T	A	SOX2_HMG_3	1	1	+	10.244319853959212	7.238276001435896	GATCAATTACATTGGTT
chr1	117007045	117007046	chr1:117007046:A:G	rs76234348	A	G	A	SOX2_HMG_3	-9	0	-	0	0	.
chr1	117181008	117181009	chr1:117181009:C:T	rs2185815	C	T	C	SOX2_HMG_3	-1	0	-	0	0	.
chr1	117347756	117347757	chr1:117347757:C:T	rs10923268	C	T	C	SOX2_HMG_3	7	1	-	6.379428940246618	3.6506418196852835	AAGCAATGTTAGTCATA
chr1	117616860	117616861	chr1:117616861:A:G	rs3767816	A	G	A	SOX2_HMG_3	28	0	-	0	0	.
chr1	117629915	117629916	chr1:117629916:A:G	rs6696923	A	G	A	SOX2_HMG_3	35	0	-	0	0	.
chr1	117824678	117824679	chr1:117824679:T:C	rs6680046	T	C	T	SOX2_HMG_3	-15	0	+	0	0	.
chr1	118109125	118109126	chr1:118109126:T:C	rs150264376	T	C	T	SOX2_HMG_3	26	0	+	0	0	.
chr1	118755256	118755257	chr1:118755257:A:G	rs12092621	A	G	G	SOX2_HMG_3	0	1	+	2.0331600317298517	2.2537543108151454	AGTAAATGTCAGTGGGG
chr1	118954530	118954531	chr1:118954531:G:C	rs12143789	G	C	G	SOX2_HMG_3	10	1	-	2.3256726385045052	2.3256726385045052	AGTGAATGCTCTTGATG
chr1	119115119	119115120	chr1:119115120:T:A	rs6428794	T	A	T	SOX2_HMG_3	-3	0	+	0	0	.
chr1	119225895	119225896	chr1:119225896:C:A	rs6676647	C	A	C	SOX2_HMG_3	-13	0	-	0	0	.
chr1	119482647	119482648	chr1:119482648:G:A	rs1187987196	G	A	.	SOX2_HMG_3	3	1	-	4.922481830583151	-1.9862729487320678	GCTCAATGCTAGGGAGA
chr1	119505134	119505135	chr1:119505135:C:T	rs145403736	C	T	C	SOX2_HMG_3	-17	0	+	0	0	.
chr1	119746116	119746117	chr1:119746117:C:G	rs4391705	C	G	C	SOX2_HMG_3	-10	0	+	0	0	.
chr1	119781882	119781883	chr1:119781883:G:A	rs2582784	G	A	G	SOX2_HMG_3	-11	0	+	0	0	.
chr1	119796626	119796627	chr1:119796627:G:A	rs1441012	G	A	G	SOX2_HMG_3	33	0	+	0	0	.
chr1	120095222	120095223	chr1:120095223:G:A	rs74115534	G	A	G	SOX2_HMG_3	18	0	+	0	0	.
chr1	120386976	120386977	chr1:120386977:G:A	rs147754724	G	A	G	SOX2_HMG_3	26	0	+	0	0	.
chr1	121032920	121032921	chr1:121032921:C:T	rs1324534302	C	T	c	SOX2_HMG_3	26	0	-	0	0	.
chr1	121418433	121418434	chr1:121418434:G:A	rs74115552	G	A	N	SOX2_HMG_3	-20	0	-	0	0	.
chr1	121458636	121458637	chr1:121458637:G:T	rs6600671	G	T	T	SOX2_HMG_3	18	0	+	0	0	.
chr1	121541677	121541678	chr1:121541678:T:A	rs11249432	T	A	-	SOX2_HMG_3	32	0	+	0	0	.
chr1	125080368	125080369	chr1:125080369:C:T	rs1489436730	C	T	.	SOX2_HMG_3	-14	0	-	0	0	.
chr1	125080879	125080880	chr1:125080880:C:A	rs1219494200	C	A	.	SOX2_HMG_3	25	0	+	0	0	.
chr1	125080881	125080882	chr1:125080882:T:C	rs1320009693	T	C	.	SOX2_HMG_3	27	0	+	0	0	.
chr1	125150071	125150072	chr1:125150072:C:T	rs917215021	C	T	.	SOX2_HMG_3	-13	0	-	0	0	.
chr1	145708448	145708449	chr1:145708449:C:T	rs34252135	C	T	C	SOX2_HMG_3	20	0	-	0	0	.
chr1	145805189	145805190	chr1:145805190:A:G	rs368823068	A	G	A	SOX2_HMG_3	5	1	+	4.203376682725674	-2.705378096589549	CATCAATGACATAGGAG
chr1	145823079	145823080	chr1:145823080:A:G	rs1386606282	A	G	A	SOX2_HMG_3	31	0	+	0	0	.
chr1	145826264	145826265	chr1:145826265:A:G	rs141373368	A	G	A	SOX2_HMG_3	-12	0	+	0	0	.
chr1	147041616	147041617	chr1:147041617:G:C	rs72704288	G	C	.	SOX2_HMG_3	15	1	+	5.081094771863756	3.905761633954521	CATCAATGCCATTTTGA
chr1	147569780	147569781	chr1:147569781:T:C	rs74908659	T	C	T	SOX2_HMG_3	6	1	+	1.021104321545744	-5.8876504577694755	GGCCGATGGCAGTGAGA
chr1	147739196	147739197	chr1:147739197:T:C	rs10465884	T	C	T	SOX2_HMG_3	-2	0	+	0	0	.
chr1	148929637	148929638	chr1:148929638:G:A	rs682536	G	A	-	SOX2_HMG_3	35	0	-	0	0	.
chr1	149588888	149588889	chr1:149588889:G:T	rs2646900	G	T	.	SOX2_HMG_3	28	0	-	0	0	.
chr1	149886762	149886763	chr1:149886763:G:C	rs74124040	G	C	G	SOX2_HMG_3	-2	0	-	0	0	.
chr1	149886778	149886779	chr1:149886779:T:C	chr1:149886779:T:C	T	C	T	SOX2_HMG_3	-18	0	-	0	0	.
chr1	150050849	150050850	chr1:150050850:G:A	rs72692873	G	A	G	SOX2_HMG_3	34	0	-	0	0	.
chr1	150342959	150342960	chr1:150342960:T:C	rs1272798	T	C	C	SOX2_HMG_3	-18	0	+	0	0	.
chr1	150456448	150456449	chr1:150456449:A:G	rs10788874	A	G	G	SOX2_HMG_3	14	1	+	3.466998150287942	-0.7148794670131775	CAGCAATGTACGTGATT
chr1	150464445	150464446	chr1:150464446:A:G	rs75323812	A	G	A	SOX2_HMG_3	5	1	+	2.501594977770443	-4.407159801544777	TATCAAACTCATTGAAG
chr1	150749084	150749085	chr1:150749085:A:G	rs181085131	A	G	A	SOX2_HMG_3	5	1	+	9.47780553231346	2.5690507529982387	ACACAATGATATTGAAA
chr1	150806924	150806925	chr1:150806925:G:A	rs12746973	G	A	G	SOX2_HMG_3	16	1	+	3.9992286711409752	3.725541054750704	AAACAATGATAGTCAGG
chr1	150863962	150863963	chr1:150863963:T:C	rs12406660	T	C	t	SOX2_HMG_3	19	0	-	0	0	.
chr1	151512394	151512395	chr1:151512395:A:G	rs11802310	A	G	A	SOX2_HMG_3	4	1	+	4.0830586515487095	-2.825696127766508	AACCAATTTCCTTGATG
chr1	151756279	151756280	chr1:151756280:C:T	rs11204880	C	T	C	SOX2_HMG_3	29	0	-	0	0	.
chr1	151817513	151817514	chr1:151817514:C:G	rs113229369	C	G	C	SOX2_HMG_3	-9	0	+	0	0	.
chr1	152043948	152043949	chr1:152043949:A:G	rs3007680	A	G	G	SOX2_HMG_3	10	1	+	2.949277682614102	-3.9594770967011197	TTTCAATGGTATAGTGT
chr1	152306212	152306213	chr1:152306213:C:A	rs57672167	C	A	A	SOX2_HMG_3	-6	0	-	0	0	.
chr1	152680848	152680849	chr1:152680849:A:C	rs10788844	A	C	-	SOX2_HMG_3	26	0	-	0	0	.
chr1	152751056	152751057	chr1:152751057:A:G	rs1412550	A	G	G	SOX2_HMG_3	21	0	+	0	0	.
chr1	153123823	153123824	chr1:153123824:T:G	rs762073843	T	G	T	SOX2_HMG_3	22	0	+	0	0	.
chr1	153244886	153244887	chr1:153244887:A:G	rs11205248	A	G	A	SOX2_HMG_3	-10	0	+	0	0	.
chr1	153521138	153521139	chr1:153521139:T:C	rs4430277	T	C	C	SOX2_HMG_3	5	1	-	3.0076032372494343	-3.9011515420657843	AGGCTATGGAATTGAAG
chr1	153532386	153532387	chr1:153532387:A:G	rs114719191	A	G	A	SOX2_HMG_3	22	0	+	0	0	.
chr1	153991506	153991507	chr1:153991507:A:G	rs114120114	A	G	a	SOX2_HMG_3	28	0	+	0	0	.
chr1	154586559	154586560	chr1:154586560:G:C	rs6683149	G	C	C	SOX2_HMG_3	-10	0	+	0	0	.
chr1	154693873	154693874	chr1:154693874:C:T	rs11264243	C	T	C	SOX2_HMG_3	13	1	-	1.3406410594153746	-5.568113719899845	GCTCAATGGGATAGAAG
chr1	154720527	154720528	chr1:154720528:T:C	rs77510509	T	C	T	SOX2_HMG_3	-5	0	-	0	0	.
chr1	154744406	154744407	chr1:154744407:T:C	rs10908431	T	C	T	SOX2_HMG_3	-17	0	+	0	0	.
chr1	154744410	154744411	chr1:154744411:C:T	rs78651737	C	T	c	SOX2_HMG_3	-13	0	+	0	0	.
chr1	154757464	154757465	chr1:154757465:T:C	rs11804231	T	C	T	SOX2_HMG_3	1	1	+	7.89402499065913	7.89402499065913	TTACAATTGTATTGAAG
chr1	154841876	154841877	chr1:154841877:C:T	rs13376333	C	T	T	SOX2_HMG_3	-4	0	+	0	0	.
chr1	155045188	155045189	chr1:155045189:T:C	rs114543508	T	C	T	SOX2_HMG_3	21	0	+	0	0	.
chr1	156109291	156109292	chr1:156109292:C:T	rs915180	C	T	C	SOX2_HMG_3	22	0	-	0	0	.
chr1	156178373	156178374	chr1:156178374:T:C	rs6701295	T	C	C	SOX2_HMG_3	-11	0	-	0	0	.
chr1	156376271	156376272	chr1:156376272:T:C	rs74229292	T	C	T	SOX2_HMG_3	11	1	+	7.189587742656883	0.49689624442453617	CATCATTTGCATTGAAG
chr1	156655779	156655780	chr1:156655780:T:C	rs10796963	T	C	T	SOX2_HMG_3	28	0	-	0	0	.
chr1	156937288	156937289	chr1:156937289:T:C	rs945508	T	C	C	SOX2_HMG_3	11	1	+	7.779991430515475	1.087299932283127	GCTCAATGGTATGGAAG
chr1	157047097	157047098	chr1:157047098:T:C	rs539331161	T	C	T	SOX2_HMG_3	-6	0	+	0	0	.
chr1	157705206	157705207	chr1:157705207:G:T	rs2317230	G	T	T	SOX2_HMG_3	-18	0	+	0	0	.
chr1	157777283	157777284	chr1:157777284:A:T	rs7517586	A	T	T	SOX2_HMG_3	24	0	+	0	0	.
chr1	158104429	158104430	chr1:158104430:G:A	rs17421546	G	A	G	SOX2_HMG_3	-18	0	-	0	0	.
chr1	158495150	158495151	chr1:158495151:C:T	rs1259002340	C	T	C	SOX2_HMG_3	2	1	-	6.395389731444785	6.395389731444785	AAGCAATGCTATTCATT
chr1	158520994	158520995	chr1:158520995:A:T	rs74802440	A	T	A	SOX2_HMG_3	-11	0	+	0	0	.
chr1	158534920	158534921	chr1:158534921:T:C	rs2873593	T	C	C	SOX2_HMG_3	-20	0	-	0	0	.
chr1	158741503	158741504	chr1:158741504:A:C	rs2852643	A	C	C	SOX2_HMG_3	27	0	+	0	0	.
chr1	158773578	158773579	chr1:158773579:T:C	rs73015561	T	C	T	SOX2_HMG_3	5	1	-	11.274965722579164	4.366210943263943	GTTCAATGAAATTGAGA
chr1	159005658	159005659	chr1:159005659:C:A	rs856069	C	A	A	SOX2_HMG_3	-16	0	+	0	0	.
chr1	159015344	159015345	chr1:159015345:A:G	rs1361565	A	G	A	SOX2_HMG_3	-11	0	-	0	0	.
chr1	159046642	159046643	chr1:159046643:A:C	rs115506051	A	C	.	SOX2_HMG_3	-17	0	+	0	0	.
chr1	159162741	159162742	chr1:159162742:G:A	rs12045546	G	A	G	SOX2_HMG_3	-9	0	+	0	0	.
chr1	159587651	159587652	chr1:159587652:G:A	rs995982666	G	A	G	SOX2_HMG_3	36	0	-	0	0	.
chr1	159730018	159730019	chr1:159730019:C:G	chr1:159730019:C:G	C	G	C	SOX2_HMG_3	-17	0	+	0	0	.
chr1	159819472	159819473	chr1:159819473:A:C	rs76603630	A	C	A	SOX2_HMG_3	22	0	+	0	0	.
chr1	159903476	159903477	chr1:159903477:T:C	rs56356610	T	C	T	SOX2_HMG_3	6	1	+	2.168867832000327	-4.7398869473148935	CGTCAATGGAATAGGAG
chr1	159932229	159932230	chr1:159932230:C:T	rs72702746	C	T	T	SOX2_HMG_3	-20	0	+	0	0	.
chr1	159932261	159932262	chr1:159932262:T:C	rs75494729	T	C	T	SOX2_HMG_3	12	1	+	6.9686144456630394	0.05985966634781914	GGTCAAGGTTAGTGAGA
chr1	159979860	159979861	chr1:159979861:T:C	rs2789425	T	C	T	SOX2_HMG_3	26	0	-	0	0	.
chr1	160019136	160019137	chr1:160019137:A:G	rs1934080	A	G	A	SOX2_HMG_3	-6	0	-	0	0	.
chr1	160053301	160053302	chr1:160053302:A:G	rs12122979	A	G	A	SOX2_HMG_3	-15	0	+	0	0	.
chr1	160149467	160149468	chr1:160149468:A:G	rs12089245	A	G	A	SOX2_HMG_3	-6	0	+	0	0	.
chr1	160149489	160149490	chr1:160149490:G:C	rs911229	G	C	G	SOX2_HMG_3	16	1	+	5.3636844204486085	3.363841925532064	TAGCAATTTTATTAATG
chr1	160285210	160285211	chr1:160285211:C:G	rs186324994	C	G	C	SOX2_HMG_3	-5	0	+	0	0	.
chr1	160285212	160285213	chr1:160285213:G:A	rs12086288	G	A	G	SOX2_HMG_3	-3	0	+	0	0	.
chr1	160343113	160343114	chr1:160343114:C:G	rs7555490	C	G	C	SOX2_HMG_3	24	0	-	0	0	.
chr1	160349264	160349265	chr1:160349265:T:C	rs12239946	T	C	T	SOX2_HMG_3	21	0	-	0	0	.
chr1	160576865	160576866	chr1:160576866:C:T	rs2369721	C	T	T	SOX2_HMG_3	18	0	-	0	0	.
chr1	160610758	160610759	chr1:160610759:G:T	rs3796504	G	T	G	SOX2_HMG_3	22	0	-	0	0	.
chr1	160714744	160714745	chr1:160714745:A:C	rs352689	A	C	C	SOX2_HMG_3	-20	0	+	0	0	.
chr1	160714759	160714760	chr1:160714760:T:G	rs352690	T	G	G	SOX2_HMG_3	-5	0	+	0	0	.
chr1	160795943	160795944	chr1:160795944:G:T	rs115154491	G	T	g	SOX2_HMG_3	1	1	+	5.296970505978354	4.122574243534331	TGTCAAAGCAAGTGATG
chr1	160830813	160830814	chr1:160830814:C:T	rs74124288	C	T	C	SOX2_HMG_3	-7	0	-	0	0	.
chr1	160908648	160908649	chr1:160908649:C:T	rs56294243	C	T	.	SOX2_HMG_3	20	0	+	0	0	.
chr1	160914273	160914274	chr1:160914274:C:A	rs568828398	C	A	.	SOX2_HMG_3	-5	0	+	0	0	.
chr1	160993580	160993581	chr1:160993581:A:G	rs746235617	A	G	A	SOX2_HMG_3	16	1	-	4.849084124785116	3.6523120716447623	ATTAAATTTTATTGAAT
chr1	161175214	161175215	chr1:161175215:C:T	rs3813620	C	T	C	SOX2_HMG_3	36	0	+	0	0	.
chr1	161749424	161749425	chr1:161749425:A:C	rs12121310	A	C	A	SOX2_HMG_3	18	0	+	0	0	.
chr1	161986013	161986014	chr1:161986014:C:T	rs2341465	C	T	C	SOX2_HMG_3	22	0	+	0	0	.
chr1	162019627	162019628	chr1:162019628:T:C	rs6427645	T	C	C	SOX2_HMG_3	11	1	+	4.2661109617805515	-2.426580536451796	CAGCAATTTTCTTGAAG
chr1	162022653	162022654	chr1:162022654:G:A	rs12124442	G	A	G	SOX2_HMG_3	22	0	-	0	0	.
chr1	162305937	162305938	chr1:162305938:A:G	rs1396224	A	G	A	SOX2_HMG_3	0	1	+	6.270121724288646	6.490716003373939	ATTAAATGTAATTGATT
chr1	162671432	162671433	chr1:162671433:G:A	rs548753231	G	A	G	SOX2_HMG_3	-19	0	-	0	0	.
chr1	162671433	162671434	chr1:162671434:A:G	rs565660767	A	G	A	SOX2_HMG_3	-20	0	-	0	0	.
chr1	162833963	162833964	chr1:162833964:G:A	rs2805042	G	A	G	SOX2_HMG_3	28	0	-	0	0	.
chr1	162840672	162840673	chr1:162840673:C:A	rs72713314	C	A	C	SOX2_HMG_3	-14	0	-	0	0	.
chr1	163186927	163186928	chr1:163186928:A:G	rs4657250	A	G	A	SOX2_HMG_3	30	0	+	0	0	.
chr1	163258143	163258144	chr1:163258144:C:A	rs116332261	C	A	C	SOX2_HMG_3	-3	0	-	0	0	.
chr1	163396014	163396015	chr1:163396015:T:A	chr1:163396015:T:A	T	A	T	SOX2_HMG_3	6	1	+	4.811658218971261	-2.0970965603439584	TAACAATGCTAATGAGA
chr1	164058311	164058312	chr1:164058312:G:A	rs61811205	G	A	G	SOX2_HMG_3	23	0	-	0	0	.
chr1	164058323	164058324	chr1:164058324:C:T	rs144023894	C	T	C	SOX2_HMG_3	11	1	-	2.434148865734417	-2.841462663277981	GGGCAAGGGTAGTGAGT
chr1	164564365	164564366	chr1:164564366:C:T	rs8179321	C	T	C	SOX2_HMG_3	30	0	+	0	0	.
chr1	164660776	164660777	chr1:164660777:A:G	rs148444150	A	G	A	SOX2_HMG_3	36	0	-	0	0	.
chr1	164671959	164671960	chr1:164671960:G:A	rs12723705	G	A	G	SOX2_HMG_3	27	0	+	0	0	.
chr1	164689445	164689446	chr1:164689446:G:A	rs11805889	G	A	G	SOX2_HMG_3	28	0	+	0	0	.
chr1	164806709	164806710	chr1:164806710:C:T	rs16835123	C	T	C	SOX2_HMG_3	0	1	+	2.615369822632595	2.478040844583931	CCTCAGTAGTAGTGAAA
chr1	165054748	165054749	chr1:165054749:T:C	rs1494416	T	C	C	SOX2_HMG_3	17	0	+	0	0	.
chr1	165173986	165173987	chr1:165173987:T:C	rs16840542	T	C	T	SOX2_HMG_3	28	0	-	0	0	.
chr1	165228606	165228607	chr1:165228607:T:C	rs10494437	T	C	T	SOX2_HMG_3	-13	0	-	0	0	.
chr1	165384090	165384091	chr1:165384091:G:T	rs1846940	G	T	G	SOX2_HMG_3	-10	0	+	0	0	.
chr1	165597915	165597916	chr1:165597916:A:G	rs17408590	A	G	A	SOX2_HMG_3	6	1	-	4.731744141918377	-2.1770106373968447	AGTCAGTGTAATTGTTT
chr1	165955381	165955382	chr1:165955382:T:G	rs4540635	T	G	G	SOX2_HMG_3	31	0	+	0	0	.
chr1	165955382	165955383	chr1:165955383:G:C	rs13375130	G	C	G	SOX2_HMG_3	32	0	+	0	0	.
chr1	166352800	166352801	chr1:166352801:C:T	rs11587733	C	T	C	SOX2_HMG_3	34	0	+	0	0	.
chr1	166355108	166355109	chr1:166355109:A:G	rs148552395	A	G	A	SOX2_HMG_3	-11	0	+	0	0	.
chr1	166487238	166487239	chr1:166487239:T:G	rs7552571	T	G	G	SOX2_HMG_3	23	0	+	0	0	.
chr1	166514293	166514294	chr1:166514294:T:C	rs12097144	T	C	T	SOX2_HMG_3	6	1	+	6.244837793922085	-0.6639169853931359	TATCAATTTTATTTTTA
chr1	166571162	166571163	chr1:166571163:T:C	rs12143336	T	C	T	SOX2_HMG_3	11	1	+	2.616293629539477	-4.07639786869287	CTGCAATGTTATTGCTC
chr1	166571174	166571175	chr1:166571175:T:C	rs17430677	T	C	T	SOX2_HMG_3	23	0	+	0	0	.
chr1	167152723	167152724	chr1:167152724:C:T	rs4657638	C	T	C	SOX2_HMG_3	27	0	+	0	0	.
chr1	167163498	167163499	chr1:167163499:T:G	rs34758860	T	G	t	SOX2_HMG_3	0	1	-	10.261390938411589	9.736918315785559	AGTCAATTGAATTGTTG
chr1	167435894	167435895	chr1:167435895:G:A	rs1723023	G	A	G	SOX2_HMG_3	0	1	+	4.365274067798733	4.1446797887134395	GGTCAATGAAATCGACA
chr1	167504187	167504188	chr1:167504188:A:T	rs1737506	A	T	A	SOX2_HMG_3	24	0	-	0	0	.
chr1	167516397	167516398	chr1:167516398:A:C	rs1737502	A	C	A	SOX2_HMG_3	-6	0	-	0	0	.
chr1	167522247	167522248	chr1:167522248:A:C	rs858535	A	C	A	SOX2_HMG_3	0	1	+	3.5583510859145986	3.0338784632885685	AGACAATACAAGTGTTG
chr1	167623505	167623506	chr1:167623506:A:C	rs1229399	A	C	A	SOX2_HMG_3	-7	0	+	0	0	.
chr1	167726456	167726457	chr1:167726457:G:C	rs12069064	G	C	G	SOX2_HMG_3	-19	0	+	0	0	.
chr1	167837691	167837692	chr1:167837692:G:T	rs1034466	G	T	T	SOX2_HMG_3	-13	0	-	0	0	.
chr1	167938131	167938132	chr1:167938132:C:T	rs367545192	C	T	C	SOX2_HMG_3	-9	0	-	0	0	.
chr1	168172619	168172620	chr1:168172620:A:G	rs546812580	A	G	A	SOX2_HMG_3	-6	0	-	0	0	.
chr1	168592295	168592296	chr1:168592296:C:T	rs4656606	C	T	C	SOX2_HMG_3	18	0	+	0	0	.
chr1	168844002	168844003	chr1:168844003:A:C	rs6695006	A	C	A	SOX2_HMG_3	10	1	+	2.8544496443275507	-4.05430513498767	AACCATTGAAATTGAAG
chr1	168844003	168844004	chr1:168844004:T:C	rs75819660	T	C	T	SOX2_HMG_3	11	1	+	2.8544496443275507	-3.8382418539047953	AACCATTGAAATTGAAG
chr1	168894601	168894602	chr1:168894602:T:C	rs908931118	T	C	T	SOX2_HMG_3	-1	0	+	0	0	.
chr1	169091707	169091708	chr1:169091708:A:G	rs115305638	A	G	A	SOX2_HMG_3	5	1	+	5.921822894170951	-0.9869318851442694	TATAAATGGAAGTGAGA
chr1	169217794	169217795	chr1:169217795:C:G	rs150537477	C	G	c	SOX2_HMG_3	19	0	+	0	0	.
chr1	169708151	169708152	chr1:169708152:C:T	rs3766129	C	T	T	SOX2_HMG_3	-7	0	-	0	0	.
chr1	169886434	169886435	chr1:169886435:A:G	rs3766151	A	G	G	SOX2_HMG_3	6	1	-	8.871261333738866	1.9625065544236462	AGTCAATGTTATTTAAG
chr1	169891057	169891058	chr1:169891058:C:T	rs16862745	C	T	C	SOX2_HMG_3	16	1	-	3.3934617266025273	3.119774110212256	AGGCCATGAAATTGATG
chr1	170461812	170461813	chr1:170461813:C:T	rs146160087	C	T	C	SOX2_HMG_3	23	0	+	0	0	.
chr1	170461813	170461814	chr1:170461814:A:G	rs6660575	A	G	a	SOX2_HMG_3	24	0	+	0	0	.
chr1	170471217	170471218	chr1:170471218:A:G	rs12747498	A	G	A	SOX2_HMG_3	15	1	-	3.3998568134495257	0.5571476572726672	CAATAATATTAGTGATG
chr1	170807707	170807708	chr1:170807708:G:C	rs55813298	G	C	G	SOX2_HMG_3	21	0	-	0	0	.
chr1	171741264	171741265	chr1:171741265:C:T	rs2298914	C	T	C	SOX2_HMG_3	-14	0	-	0	0	.
chr1	171834661	171834662	chr1:171834662:T:C	rs6698366	T	C	T	SOX2_HMG_3	11	1	+	6.837101600052819	0.14441010182047154	GTTCCATGTCATTGAAA
chr1	171850877	171850878	chr1:171850878:G:C	rs10798706	G	C	G	SOX2_HMG_3	13	1	+	2.544622693748787	-4.364132085566434	AAGCAATGCTTTTGTGA
chr1	172357350	172357351	chr1:172357351:A:G	rs80298437	A	G	A	SOX2_HMG_3	31	0	-	0	0	.
chr1	172495758	172495759	chr1:172495759:C:A	rs12068145	C	A	C	SOX2_HMG_3	-12	0	+	0	0	.
chr1	172616515	172616516	chr1:172616516:A:G	rs9425646	A	G	G	SOX2_HMG_3	2	1	-	4.624949535614016	-0.37842253470157194	TGTCAATGCTGTTGTAG
chr1	172658357	172658358	chr1:172658358:C:T	rs763110	C	T	T	SOX2_HMG_3	23	0	+	0	0	.
chr1	172711428	172711429	chr1:172711429:C:T	rs56663247	C	T	C	SOX2_HMG_3	-17	0	-	0	0	.
chr1	172760303	172760304	chr1:172760304:G:A	rs6658247	G	A	G	SOX2_HMG_3	32	0	+	0	0	.
chr1	172875109	172875110	chr1:172875110:T:C	rs12136659	T	C	T	SOX2_HMG_3	-13	0	+	0	0	.
chr1	172903815	172903816	chr1:172903816:A:G	rs16845066	A	G	A	SOX2_HMG_3	11	1	-	3.4657342573390673	-3.2269572408932796	CAACAGTGAAATTGAAG
chr1	173297372	173297373	chr1:173297373:A:G	rs74371917	A	G	A	SOX2_HMG_3	19	0	-	0	0	.
chr1	173430271	173430272	chr1:173430272:T:G	rs113786438	T	G	T	SOX2_HMG_3	0	1	-	3.88831890855572	3.36384628592969	AAACAATGTTATTTGTG
chr1	173570497	173570498	chr1:173570498:G:A	rs80054184	G	A	G	SOX2_HMG_3	-9	0	-	0	0	.
chr1	174789299	174789300	chr1:174789300:C:G	rs140804258	C	G	C	SOX2_HMG_3	11	1	-	5.117759080009499	-0.1578524490028988	GGTTAATTGCAGTGATT
chr1	175076197	175076198	chr1:175076198:A:T	rs6703323	A	T	T	SOX2_HMG_3	-6	0	+	0	0	.
chr1	175132499	175132500	chr1:175132500:A:C	rs80057632	A	C	A	SOX2_HMG_3	-13	0	+	0	0	.
chr1	175237688	175237689	chr1:175237689:G:A	rs12135975	G	A	G	SOX2_HMG_3	25	0	+	0	0	.
chr1	175247264	175247265	chr1:175247265:C:A	rs71645237	C	A	C	SOX2_HMG_3	-7	0	-	0	0	.
chr1	175564903	175564904	chr1:175564904:C:T	rs78083726	C	T	C	SOX2_HMG_3	34	0	-	0	0	.
chr1	175564906	175564907	chr1:175564907:C:T	chr1:175564907:C:T	C	T	C	SOX2_HMG_3	31	0	-	0	0	.
chr1	175985445	175985446	chr1:175985446:G:A	rs77494806	G	A	G	SOX2_HMG_3	11	1	+	3.860236458344844	-1.4153750706675543	ATTCAATTTCAGAGATT
chr1	176829223	176829224	chr1:176829224:T:C	rs16850236	T	C	T	SOX2_HMG_3	5	1	-	6.158855219978112	-0.7498995593371085	AATCAAGTACATTGAGA
chr1	176905578	176905579	chr1:176905579:T:C	rs2205889	T	C	C	SOX2_HMG_3	34	0	-	0	0	.
chr1	177747603	177747604	chr1:177747604:G:T	rs3117758	G	T	G	SOX2_HMG_3	-11	0	+	0	0	.
chr1	177801732	177801733	chr1:177801733:C:A	rs11585009	C	A	A	SOX2_HMG_3	29	0	-	0	0	.
chr1	177943686	177943687	chr1:177943687:G:A	rs4652281	G	A	G	SOX2_HMG_3	13	1	+	1.079358048371121	-5.829396730944099	GCTCAGTGTCAGTGGGG
chr1	177958518	177958519	chr1:177958519:C:A	rs16828589	C	A	C	SOX2_HMG_3	22	0	-	0	0	.
chr1	178310517	178310518	chr1:178310518:A:G	rs12022185	A	G	A	SOX2_HMG_3	5	1	+	6.593319850293733	-0.3154349290214878	AATCAATTTTACTGTTT
chr1	178573462	178573463	chr1:178573463:G:A	rs143218531	G	A	G	SOX2_HMG_3	-3	0	+	0	0	.
chr1	178627658	178627659	chr1:178627659:A:T	rs2811304	A	T	A	SOX2_HMG_3	29	0	-	0	0	.
chr1	179027277	179027278	chr1:179027278:A:G	rs10913673	A	G	A	SOX2_HMG_3	2	1	-	7.333734851635028	2.3303627813194403	AATCAACGCCAGTGAAA
chr1	179126412	179126413	chr1:179126413:C:T	rs28914528	C	T	C	SOX2_HMG_3	28	0	+	0	0	.
chr1	179129339	179129340	chr1:179129340:C:T	rs2486995	C	T	C	SOX2_HMG_3	-12	0	+	0	0	.
chr1	179484856	179484857	chr1:179484857:A:C	rs36027796	A	C	C	SOX2_HMG_3	23	0	-	0	0	.
chr1	179664025	179664026	chr1:179664026:C:T	rs12042409	C	T	T	SOX2_HMG_3	19	0	+	0	0	.
chr1	179874155	179874156	chr1:179874156:T:G	rs668813	T	G	T	SOX2_HMG_3	-17	0	-	0	0	.
chr1	180068441	180068442	chr1:180068442:A:C	rs12138429	A	C	A	SOX2_HMG_3	-10	0	+	0	0	.
chr1	180184427	180184428	chr1:180184428:C:T	rs6664185	C	T	C	SOX2_HMG_3	20	0	+	0	0	.
chr1	180269359	180269360	chr1:180269360:A:G	rs2290478	A	G	A	SOX2_HMG_3	26	0	+	0	0	.
chr1	180469759	180469760	chr1:180469760:A:T	rs6663823	A	T	T	SOX2_HMG_3	36	0	-	0	0	.
chr1	180554747	180554748	chr1:180554748:T:G	rs7551178	T	G	G	SOX2_HMG_3	11	1	+	14.03471882797231	12.61763885875236	TGTCAATTTTATTGATA
chr1	180563377	180563378	chr1:180563378:A:G	rs61811629	A	G	G	SOX2_HMG_3	17	0	+	0	0	.
chr1	180563389	180563390	chr1:180563390:T:C	rs61811630	T	C	C	SOX2_HMG_3	29	0	+	0	0	.
chr1	180567960	180567961	chr1:180567961:C:T	rs76044604	C	T	C	SOX2_HMG_3	-10	0	+	0	0	.
chr1	180787919	180787920	chr1:180787920:A:G	rs3761904	A	G	A	SOX2_HMG_3	-8	0	+	0	0	.
chr1	181149555	181149556	chr1:181149556:T:C	rs12066554	T	C	C	SOX2_HMG_3	28	0	+	0	0	.
chr1	181423562	181423563	chr1:181423563:T:C	rs631583	T	C	C	SOX2_HMG_3	10	1	-	4.407812079330143	-2.5009426999850772	TGTGAATGCCAGTGAGA
chr1	181643800	181643801	chr1:181643801:C:T	rs10910978	C	T	C	SOX2_HMG_3	-5	0	-	0	0	.
chr1	182094827	182094828	chr1:182094828:T:G	rs7545241	T	G	T	SOX2_HMG_3	34	0	-	0	0	.
chr1	182374214	182374215	chr1:182374215:G:A	rs79038403	G	A	G	SOX2_HMG_3	-13	0	+	0	0	.
chr1	182444413	182444414	chr1:182444414:G:A	rs73057336	G	A	G	SOX2_HMG_3	34	0	+	0	0	.
chr1	182574530	182574531	chr1:182574531:T:G	rs1048254	T	G	G	SOX2_HMG_3	30	0	-	0	0	.
chr1	182579471	182579472	chr1:182579472:C:A	rs557934	C	A	C	SOX2_HMG_3	34	0	+	0	0	.
chr1	182606535	182606536	chr1:182606536:G:A	rs3754289	G	A	G	SOX2_HMG_3	13	1	+	7.126058472055131	0.21730369273991035	AAACAAAGGCATTGATG
chr1	182732524	182732525	chr1:182732525:A:G	rs6678355	A	G	A	SOX2_HMG_3	28	0	-	0	0	.
chr1	182770466	182770467	chr1:182770467:T:C	rs36125699	T	C	T	SOX2_HMG_3	11	1	+	3.3221118497948408	-3.3705796484375052	TAGCAAGTTCATTGAAG
chr1	182795968	182795969	chr1:182795969:C:T	rs6698614	C	T	C	SOX2_HMG_3	3	1	+	5.96092758616296	-0.9478271931522597	GGACAATGTCAGTGTGT
chr1	183060843	183060844	chr1:183060844:G:T	rs73051750	G	T	G	SOX2_HMG_3	23	0	+	0	0	.
chr1	183620489	183620490	chr1:183620490:C:T	rs10797895	C	T	C	SOX2_HMG_3	-20	0	+	0	0	.
chr1	183638971	183638972	chr1:183638972:C:T	rs12024089	C	T	C	SOX2_HMG_3	22	0	-	0	0	.
chr1	183689519	183689520	chr1:183689520:T:C	chr1:183689520:T:C	T	C	T	SOX2_HMG_3	-11	0	-	0	0	.
chr1	183689525	183689526	chr1:183689526:T:G	chr1:183689526:T:G	T	G	T	SOX2_HMG_3	-17	0	-	0	0	.
chr1	183817819	183817820	chr1:183817820:C:T	rs114423999	C	T	C	SOX2_HMG_3	-12	0	+	0	0	.
chr1	183817835	183817836	chr1:183817836:A:G	rs56346943	A	G	A	SOX2_HMG_3	4	1	+	3.49495440760286	-3.413800371712359	AAGCAATGGTACTGTGA
chr1	183998410	183998411	chr1:183998411:C:T	rs4651163	C	T	C	SOX2_HMG_3	28	0	-	0	0	.
chr1	184020180	184020181	chr1:184020181:A:G	rs16822334	A	G	A	SOX2_HMG_3	-3	0	-	0	0	.
chr1	184151070	184151071	chr1:184151071:T:A	rs114398179	T	A	T	SOX2_HMG_3	8	1	+	7.11078921644309	6.124277349214799	GTTCAAAGTCATTGAAG
chr1	184634860	184634861	chr1:184634861:A:C	chr1:184634861:A:C	A	C	A	SOX2_HMG_3	-13	0	-	0	0	.
chr1	184634864	184634865	chr1:184634865:A:G	chr1:184634865:A:G	A	G	A	SOX2_HMG_3	-17	0	-	0	0	.
chr1	184825251	184825252	chr1:184825252:C:G	rs10797989	C	G	C	SOX2_HMG_3	4	1	-	2.196661361314054	2.196661361314054	TCTCGATTGCAGTGAGG
chr1	184836141	184836142	chr1:184836142:A:T	rs116173697	A	T	A	SOX2_HMG_3	6	1	-	5.383106341534441	-1.5256484377807789	TGCCAATGGTATTGTCA
chr1	184953651	184953652	chr1:184953652:C:T	rs73054649	C	T	C	SOX2_HMG_3	-10	0	+	0	0	.
chr1	185696545	185696546	chr1:185696546:C:T	rs35823130	C	T	C	SOX2_HMG_3	-2	0	+	0	0	.
chr1	185917917	185917918	chr1:185917918:C:A	rs115863866	C	A	C	SOX2_HMG_3	9	1	-	3.199048287075951	9.63839865817605	TCTCAATTGGAGTGAGA
chr1	186079541	186079542	chr1:186079542:C:T	rs114560616	C	T	C	SOX2_HMG_3	18	0	-	0	0	.
chr1	186663184	186663185	chr1:186663185:C:T	rs10911902	C	T	C	SOX2_HMG_3	9	1	+	9.131585094686988	9.938255228624035	GATCAGTGTCAGTGATT
chr1	186689697	186689698	chr1:186689698:C:G	rs10911911	C	G	C	SOX2_HMG_3	-9	0	+	0	0	.
chr1	186887095	186887096	chr1:186887096:C:G	rs16826066	C	G	C	SOX2_HMG_3	25	0	-	0	0	.
chr1	186903573	186903574	chr1:186903574:A:G	rs1033409	A	G	A	SOX2_HMG_3	-15	0	-	0	0	.
chr1	186995318	186995319	chr1:186995319:T:C	rs12131375	T	C	T	SOX2_HMG_3	-15	0	-	0	0	.
chr1	187092016	187092017	chr1:187092017:A:G	rs12403165	A	G	A	SOX2_HMG_3	-5	0	-	0	0	.
chr1	187103484	187103485	chr1:187103485:C:G	rs1569878	C	G	C	SOX2_HMG_3	-11	0	-	0	0	.
chr1	187268031	187268032	chr1:187268032:G:A	rs330749	G	A	A	SOX2_HMG_3	-19	0	+	0	0	.
chr1	187342588	187342589	chr1:187342589:A:T	rs1148760	A	T	A	SOX2_HMG_3	-9	0	-	0	0	.
chr1	187577897	187577898	chr1:187577898:T:C	rs2789396	T	C	t	SOX2_HMG_3	5	1	-	8.184122996228185	1.2753682169129634	TATCAATGCTTGTGATT
chr1	187879242	187879243	chr1:187879243:G:C	rs59642144	G	C	G	SOX2_HMG_3	-18	0	-	0	0	.
chr1	188356406	188356407	chr1:188356407:G:T	rs12021506	G	T	G	SOX2_HMG_3	18	0	-	0	0	.
chr1	188433571	188433572	chr1:188433572:A:G	rs16828702	A	G	A	SOX2_HMG_3	24	0	-	0	0	.
chr1	188479331	188479332	chr1:188479332:G:C	rs4414003	G	C	C	SOX2_HMG_3	-12	0	+	0	0	.
chr1	188498999	188499000	chr1:188499000:C:G	rs68098498	C	G	C	SOX2_HMG_3	21	0	-	0	0	.
chr1	188582571	188582572	chr1:188582572:T:C	rs28627959	T	C	T	SOX2_HMG_3	-8	0	-	0	0	.
chr1	189501722	189501723	chr1:189501723:C:T	rs12726610	C	T	C	SOX2_HMG_3	-7	0	+	0	0	.
chr1	189657160	189657161	chr1:189657161:G:A	rs2027325	G	A	G	SOX2_HMG_3	25	0	-	0	0	.
chr1	189657188	189657189	chr1:189657189:G:A	rs554431	G	A	A	SOX2_HMG_3	-3	0	-	0	0	.
chr1	190132900	190132901	chr1:190132901:C:T	rs10753936	C	T	C	SOX2_HMG_3	-15	0	-	0	0	.
chr1	190353457	190353458	chr1:190353458:T:C	rs185860283	T	C	T	SOX2_HMG_3	28	0	-	0	0	.
chr1	191022960	191022961	chr1:191022961:A:C	chr1:191022961:A:C	A	C	A	SOX2_HMG_3	-14	0	+	0	0	.
chr1	191582222	191582223	chr1:191582223:G:A	rs72727109	G	A	G	SOX2_HMG_3	-5	0	+	0	0	.
chr1	191871337	191871338	chr1:191871338:C:G	rs12139932	C	G	C	SOX2_HMG_3	29	0	-	0	0	.
chr1	192291282	192291283	chr1:192291283:A:G	rs6428092	A	G	A	SOX2_HMG_3	34	0	+	0	0	.
chr1	192724865	192724866	chr1:192724866:C:A	chr1:192724866:C:A	C	A	C	SOX2_HMG_3	29	0	-	0	0	.
chr1	192861979	192861980	chr1:192861980:C:T	rs1231760	C	T	C	SOX2_HMG_3	-6	0	+	0	0	.
chr1	192919364	192919365	chr1:192919365:G:A	rs12722757	G	A	G	SOX2_HMG_3	24	0	+	0	0	.
chr1	193123077	193123078	chr1:193123078:A:T	rs10158344	A	T	a	SOX2_HMG_3	33	0	-	0	0	.
chr1	193407109	193407110	chr1:193407110:T:A	rs116454229	T	A	T	SOX2_HMG_3	26	0	-	0	0	.
chr1	193589721	193589722	chr1:193589722:A:G	rs568553746	A	G	A	SOX2_HMG_3	22	0	-	0	0	.
chr1	193589750	193589751	chr1:193589751:C:G	rs731360	C	G	G	SOX2_HMG_3	-7	0	-	0	0	.
chr1	194063140	194063141	chr1:194063141:G:A	rs1442423	G	A	A	SOX2_HMG_3	-15	0	-	0	0	.
chr1	195297892	195297893	chr1:195297893:T:C	rs141255937	T	C	T	SOX2_HMG_3	9	1	+	4.235903712118821	3.429233578181775	AAGCAATTATTTTGATT
chr1	195548756	195548757	chr1:195548757:T:C	rs80355645	T	C	T	SOX2_HMG_3	20	0	+	0	0	.
chr1	195598103	195598104	chr1:195598104:T:C	rs2993831	T	C	c	SOX2_HMG_3	24	0	-	0	0	.
chr1	195600015	195600016	chr1:195600016:T:C	rs12406671	T	C	T	SOX2_HMG_3	9	1	+	6.417066885581098	5.610396751644052	GAACAATTGTAGTGTGT
chr1	195865848	195865849	chr1:195865849:C:G	rs4587548	C	G	G	SOX2_HMG_3	33	0	+	0	0	.
chr1	195901444	195901445	chr1:195901445:A:T	rs16839087	A	T	A	SOX2_HMG_3	-3	0	+	0	0	.
chr1	196639027	196639028	chr1:196639028:A:G	rs565088	A	G	G	SOX2_HMG_3	12	1	-	3.0904633179044745	-3.818291461410746	GAATAATGGTAGTGACT
chr1	197638818	197638819	chr1:197638819:C:T	rs564847785	C	T	C	SOX2_HMG_3	36	0	+	0	0	.
chr1	197676318	197676319	chr1:197676319:T:A	rs2224873	T	A	T	SOX2_HMG_3	-6	0	+	0	0	.
chr1	197740830	197740831	chr1:197740831:G:A	rs76312929	G	A	G	SOX2_HMG_3	27	0	+	0	0	.
chr1	197787092	197787093	chr1:197787093:T:G	rs1747822	T	G	G	SOX2_HMG_3	4	1	-	7.672950444805204	0.764195665489984	AATTAATTTTAGTGATT
chr1	198123423	198123424	chr1:198123424:C:T	rs113161864	C	T	C	SOX2_HMG_3	-1	0	+	0	0	.
chr1	198654053	198654054	chr1:198654054:T:A	rs16843597	T	A	T	SOX2_HMG_3	13	1	-	4.420583870528894	4.420583870528894	CGTCAATTTTATTAACA
chr1	199102510	199102511	chr1:199102511:C:T	rs77678300	C	T	C	SOX2_HMG_3	29	0	-	0	0	.
chr1	199152201	199152202	chr1:199152202:G:A	rs3861924	G	A	G	SOX2_HMG_3	26	0	-	0	0	.
chr1	199160613	199160614	chr1:199160614:A:G	rs75424237	A	G	A	SOX2_HMG_3	-15	0	-	0	0	.
chr1	199433847	199433848	chr1:199433848:C:A	rs5779967	C	A	C	SOX2_HMG_3	-19	0	-	0	0	.
chr1	199821559	199821560	chr1:199821560:C:A	rs17662991	C	A	C	SOX2_HMG_3	19	0	-	0	0	.
chr1	199821573	199821574	chr1:199821574:T:C	rs9661058	T	C	T	SOX2_HMG_3	5	1	-	3.0830058124726527	-3.8257489668425686	GGTCAATTTAAGTGCTC
chr1	199844043	199844044	chr1:199844044:G:C	rs11806575	G	C	G	SOX2_HMG_3	28	0	+	0	0	.
chr1	200071716	200071717	chr1:200071717:C:T	rs10753863	C	T	T	SOX2_HMG_3	-3	0	+	0	0	.
chr1	200081075	200081076	chr1:200081076:G:A	rs2821312	G	A	A	SOX2_HMG_3	11	1	-	3.1073778298465897	9.800069328078939	ACTCAATGTAACTGGTG
chr1	200218872	200218873	chr1:200218873:C:T	rs12077195	C	T	C	SOX2_HMG_3	-9	0	-	0	0	.
chr1	200298479	200298480	chr1:200298480:A:G	rs10800693	A	G	G	SOX2_HMG_3	25	0	-	0	0	.
chr1	200834528	200834529	chr1:200834529:C:T	rs6659127	C	T	T	SOX2_HMG_3	19	0	+	0	0	.
chr1	201089384	201089385	chr1:201089385:C:T	rs35534614	C	T	C	SOX2_HMG_3	8	1	-	13.490429034158602	12.641385086794973	CATCAATGGCAGTGAGT
chr1	201097155	201097156	chr1:201097156:A:G	rs6704355	A	G	G	SOX2_HMG_3	19	0	-	0	0	.
chr1	201197306	201197307	chr1:201197307:T:C	rs11589317	T	C	C	SOX2_HMG_3	10	1	-	2.7265864549564354	-4.182168324358784	CTTCGATGACAGTGAGT
chr1	201430959	201430960	chr1:201430960:G:T	rs10800777	G	T	G	SOX2_HMG_3	-3	0	-	0	0	.
chr1	201647498	201647499	chr1:201647499:G:A	rs7364578	G	A	G	SOX2_HMG_3	17	0	-	0	0	.
chr1	201795176	201795177	chr1:201795177:A:T	rs115084174	A	T	A	SOX2_HMG_3	2	1	-	4.6927958010421555	0.8251809663641141	AATCACTGGTAGTGGAA
chr1	201876446	201876447	chr1:201876447:C:A	rs8024	C	A	C	SOX2_HMG_3	-13	0	-	0	0	.
chr1	202342445	202342446	chr1:202342446:T:C	rs111749026	T	C	T	SOX2_HMG_3	29	0	-	0	0	.
chr1	202657736	202657737	chr1:202657737:C:A	rs546579042	C	A	C	SOX2_HMG_3	17	0	-	0	0	.
chr1	202664355	202664356	chr1:202664356:C:A	rs16850204	C	A	C	SOX2_HMG_3	-15	0	+	0	0	.
chr1	202715739	202715740	chr1:202715740:C:T	rs4245699	C	T	T	SOX2_HMG_3	34	0	-	0	0	.
chr1	203114022	203114023	chr1:203114023:G:A	rs17510253	G	A	G	SOX2_HMG_3	28	0	+	0	0	.
chr1	203127638	203127639	chr1:203127639:G:A	chr1:203127639:G:A	G	A	G	SOX2_HMG_3	-13	0	-	0	0	.
chr1	203321117	203321118	chr1:203321118:T:C	rs10800910	T	C	C	SOX2_HMG_3	-9	0	+	0	0	.
chr1	203321158	203321159	chr1:203321159:G:A	rs1408142611	G	A	G	SOX2_HMG_3	32	0	+	0	0	.
chr1	203329017	203329018	chr1:203329018:T:C	rs184241917	T	C	T	SOX2_HMG_3	-7	0	+	0	0	.
chr1	203364949	203364950	chr1:203364950:T:A	rs753976944	T	A	T	SOX2_HMG_3	12	1	+	2.38518615670998	-4.523568622605239	TGTCAAGACCAGTGAAG
chr1	203371295	203371296	chr1:203371296:C:T	rs1417926	C	T	C	SOX2_HMG_3	8	1	+	1.9556600647356266	2.827396417371489	GGTCAGTGCCAATGATG
chr1	203450594	203450595	chr1:203450595:A:G	rs79715636	A	G	A	SOX2_HMG_3	5	1	+	5.242158423415884	-1.6665963558993364	GGACAATGGAAGTGTTC
chr1	203502026	203502027	chr1:203502027:A:C	rs4481909	A	C	C	SOX2_HMG_3	6	1	-	4.17907040443222	-2.729684374882999	AAACAATGTCAGAGAGG
chr1	203535415	203535416	chr1:203535416:C:T	rs35712732	C	T	C	SOX2_HMG_3	13	1	-	2.1204584876209696	-4.788296291694251	GTGCAATGGCAGCGATT
chr1	203773993	203773994	chr1:203773994:G:A	rs3820194	G	A	G	SOX2_HMG_3	-9	0	+	0	0	.
chr1	204300056	204300057	chr1:204300057:G:A	rs4531346	G	A	G	SOX2_HMG_3	28	0	-	0	0	.
chr1	204494033	204494034	chr1:204494034:A:G	rs773073081	A	G	A	SOX2_HMG_3	-6	0	-	0	0	.
chr1	204967478	204967479	chr1:204967479:A:G	rs12725682	A	G	A	SOX2_HMG_3	11	1	-	4.51194912220649	-2.1807423760258566	AATCAATGAGATTCATG
chr1	205374499	205374500	chr1:205374500:T:C	rs79345034	T	C	T	SOX2_HMG_3	11	1	+	5.7524865081735745	-0.9402049900587723	AGTCATTGAAATTGAAA
chr1	205374519	205374520	chr1:205374520:G:A	rs12402771	G	A	G	SOX2_HMG_3	31	0	+	0	0	.
chr1	205446143	205446144	chr1:205446144:G:A	rs16855619	G	A	G	SOX2_HMG_3	29	0	-	0	0	.
chr1	205478193	205478194	chr1:205478194:G:A	rs114285674	G	A	G	SOX2_HMG_3	-12	0	+	0	0	.
chr1	205706111	205706112	chr1:205706112:C:T	rs72750964	C	T	C	SOX2_HMG_3	-13	0	-	0	0	.
chr1	205860119	205860120	chr1:205860120:C:A	rs139573720	C	A	C	SOX2_HMG_3	-2	0	-	0	0	.
chr1	205984697	205984698	chr1:205984698:T:C	rs878898522	T	C	T	SOX2_HMG_3	34	0	-	0	0	.
chr1	205991648	205991649	chr1:205991649:C:T	rs1052406079	C	T	C	SOX2_HMG_3	13	1	-	4.622840526860697	-2.285914252454523	AAGCAATGGAAATGAGG
chr1	206312758	206312759	chr1:206312759:T:A	rs61816772	T	A	T	SOX2_HMG_3	-3	0	+	0	0	.
chr1	206470603	206470604	chr1:206470604:G:A	rs41303988	G	A	G	SOX2_HMG_3	-16	0	+	0	0	.
chr1	206470629	206470630	chr1:206470630:A:C	rs17020312	A	C	A	SOX2_HMG_3	10	1	+	4.535858254339398	-2.372896524975824	CATGAATGACAGTGAGC
chr1	206554705	206554706	chr1:206554706:C:T	rs10779474	C	T	T	SOX2_HMG_3	-18	0	-	0	0	.
chr1	206587353	206587354	chr1:206587354:A:T	rs7541445	A	T	T	SOX2_HMG_3	6	1	-	7.333734851635029	0.4249800723198074	AATCAATGCCAGAGAAA
chr1	206587361	206587362	chr1:206587362:C:T	rs7541507	C	T	T	SOX2_HMG_3	-2	0	-	0	0	.
chr1	206595697	206595698	chr1:206595698:T:C	rs11584983	T	C	T	SOX2_HMG_3	-2	0	-	0	0	.
chr1	206712233	206712234	chr1:206712234:C:A	rs12127517	C	A	C	SOX2_HMG_3	-9	0	+	0	0	.
chr1	206817438	206817439	chr1:206817439:T:A	rs2176511	T	A	A	SOX2_HMG_3	12	1	+	3.374350650767312	-3.534404128547908	ACTCAATGTCATTATAT
chr1	206890442	206890443	chr1:206890443:T:C	rs143827535	T	C	T	SOX2_HMG_3	22	0	-	0	0	.
chr1	206979330	206979331	chr1:206979331:A:C	rs17352409	A	C	A	SOX2_HMG_3	10	1	+	5.16539457914454	-1.743360200170679	ATACAATATAAGTGATT
chr1	207025497	207025498	chr1:207025498:A:C	rs72741370	A	C	A	SOX2_HMG_3	33	0	-	0	0	.
chr1	207870061	207870062	chr1:207870062:G:A	rs2745964	G	A	G	SOX2_HMG_3	2	1	+	6.739053769293765	6.739053769293765	CAGCAATGTCATTTATG
chr1	207951858	207951859	chr1:207951859:G:C	rs11118958	G	C	G	SOX2_HMG_3	-1	0	+	0	0	.
chr1	208128301	208128302	chr1:208128302:A:T	rs3991423	A	T	A	SOX2_HMG_3	-18	0	+	0	0	.
chr1	208245226	208245227	chr1:208245227:T:C	rs1615146	T	C	C	SOX2_HMG_3	25	0	-	0	0	.
chr1	208268005	208268006	chr1:208268006:A:C	rs371130072	A	C	A	SOX2_HMG_3	15	1	-	2.735402446805234	1.0680264285376109	GATAAATGCAAATGATG
chr1	208281025	208281026	chr1:208281026:C:T	rs1781034	C	T	C	SOX2_HMG_3	-1	0	+	0	0	.
chr1	208347403	208347404	chr1:208347404:T:A	rs568534943	T	A	T	SOX2_HMG_3	-2	0	+	0	0	.
chr1	208563920	208563921	chr1:208563921:T:C	rs12029518	T	C	T	SOX2_HMG_3	31	0	+	0	0	.
chr1	208615691	208615692	chr1:208615692:T:C	rs56768392	T	C	C	SOX2_HMG_3	1	1	-	6.2724987477286	4.440851157649309	CACCATTGGTATTGATG
chr1	208988445	208988446	chr1:208988446:A:T	rs10863738	A	T	A	SOX2_HMG_3	2	1	-	4.891588661354996	1.023973826676957	AATGAATGGTATGGATG
chr1	209132319	209132320	chr1:209132320:C:T	rs2788166	C	T	T	SOX2_HMG_3	-10	0	-	0	0	.
chr1	209413119	209413120	chr1:209413120:A:T	rs189134793	A	T	A	SOX2_HMG_3	-11	0	-	0	0	.
chr1	209484302	209484303	chr1:209484303:T:C	rs6671701	T	C	T	SOX2_HMG_3	-10	0	+	0	0	.
chr1	209621206	209621207	chr1:209621207:T:G	rs742255	T	G	T	SOX2_HMG_3	27	0	-	0	0	.
chr1	209651480	209651481	chr1:209651481:G:A	rs3753523	G	A	G	SOX2_HMG_3	25	0	-	0	0	.
chr1	209658244	209658245	chr1:209658245:T:C	rs742376	T	C	T	SOX2_HMG_3	6	1	+	6.894328007032771	-0.014426772282449596	ACTCAATAGAATTGTAA
chr1	209721952	209721953	chr1:209721953:C:G	rs3766619	C	G	C	SOX2_HMG_3	22	0	+	0	0	.
chr1	209766253	209766254	chr1:209766254:C:T	rs10779513	C	T	T	SOX2_HMG_3	20	0	+	0	0	.
chr1	209840747	209840748	chr1:209840748:A:T	rs654470	A	T	T	SOX2_HMG_3	-12	0	+	0	0	.
chr1	209884581	209884582	chr1:209884582:G:A	rs1883725	G	A	A	SOX2_HMG_3	-7	0	-	0	0	.
chr1	210373701	210373702	chr1:210373702:A:G	rs115554358	A	G	A	SOX2_HMG_3	-8	0	+	0	0	.
chr1	210445744	210445745	chr1:210445745:A:G	rs3765846	A	G	A	SOX2_HMG_3	10	1	+	5.910980033422113	-0.9977747458931068	TGTTAATGCAATTGATT
chr1	210829083	210829084	chr1:210829084:C:T	rs76389800	C	T	C	SOX2_HMG_3	32	0	+	0	0	.
chr1	210902812	210902813	chr1:210902813:C:T	rs12569344	C	T	T	SOX2_HMG_3	-10	0	-	0	0	.
chr1	210979093	210979094	chr1:210979094:A:T	rs61849024	A	T	a	SOX2_HMG_3	6	1	-	4.331922135402374	-2.576832643912847	TGTCAGTGGAATTGACA
chr1	210989696	210989697	chr1:210989697:T:C	rs6678283	T	C	T	SOX2_HMG_3	2	1	+	3.017248927149377	-1.9861231431662094	ATTCAAATGCAGTGAAA
chr1	211069581	211069582	chr1:211069582:T:A	rs4951716	T	A	A	SOX2_HMG_3	1	1	-	9.4139477774661	6.407903924942785	TATCAATTACAGTGTTT
chr1	211347571	211347572	chr1:211347572:G:C	rs35791308	G	C	G	SOX2_HMG_3	23	0	+	0	0	.
chr1	211471986	211471987	chr1:211471987:A:G	rs10494937	A	G	A	SOX2_HMG_3	5	1	+	6.179353834978318	-0.7294009443369031	AAGCAATAATAGTGAGC
chr1	211918023	211918024	chr1:211918024:A:G	rs2808383	A	G	A	SOX2_HMG_3	-13	0	-	0	0	.
chr1	211918026	211918027	chr1:211918027:C:T	rs113945518	C	T	C	SOX2_HMG_3	-16	0	-	0	0	.
chr1	212012140	212012141	chr1:212012141:A:G	rs962536472	A	G	A	SOX2_HMG_3	28	0	-	0	0	.
chr1	212012179	212012180	chr1:212012180:T:C	rs955301522	T	C	T	SOX2_HMG_3	-11	0	-	0	0	.
chr1	212231604	212231605	chr1:212231605:T:C	rs6668866	T	C	T	SOX2_HMG_3	6	1	+	4.785475545732819	-2.1232792335824016	AGTCTATGGTATTGTGT
chr1	212235665	212235666	chr1:212235666:G:A	rs7544225	G	A	G	SOX2_HMG_3	-7	0	+	0	0	.
chr1	212301567	212301568	chr1:212301568:A:G	rs2298115	A	G	A	SOX2_HMG_3	30	0	+	0	0	.
chr1	212312358	212312359	chr1:212312359:G:A	rs115851438	G	A	G	SOX2_HMG_3	33	0	+	0	0	.
chr1	212529289	212529290	chr1:212529290:C:G	rs143577983	C	G	C	SOX2_HMG_3	-17	0	+	0	0	.
chr1	212529313	212529314	chr1:212529314:A:G	rs1331060	A	G	A	SOX2_HMG_3	7	1	+	7.754811724646785	10.48359884520812	GATGAATACTATTGATT
chr1	212610598	212610599	chr1:212610599:G:A	rs4951455	G	A	G	SOX2_HMG_3	13	1	+	2.143365935571972	-4.7653888437432474	CATCTGTGGCAGTGATG
chr1	212691649	212691650	chr1:212691650:A:G	rs12068304	A	G	G	SOX2_HMG_3	24	0	-	0	0	.
chr1	212818067	212818068	chr1:212818068:A:T	rs12734543	A	T	A	SOX2_HMG_3	2	1	-	5.273144079603901	1.4055292449258594	GGTCAAGGCTATTGGTG
chr1	213126824	213126825	chr1:213126825:T:C	rs6540780	T	C	C	SOX2_HMG_3	6	1	+	6.374442962186764	-0.5343118171284578	CTACAATGGCAGTGTTG
chr1	213273609	213273610	chr1:213273610:C:A	rs61832501	C	A	C	SOX2_HMG_3	-12	0	+	0	0	.
chr1	213348217	213348218	chr1:213348218:T:G	rs17020510	T	G	T	SOX2_HMG_3	36	0	+	0	0	.
chr1	213370872	213370873	chr1:213370873:G:A	rs80048882	G	A	G	SOX2_HMG_3	28	0	+	0	0	.
chr1	213719802	213719803	chr1:213719803:A:G	rs1509871	A	G	A	SOX2_HMG_3	-15	0	+	0	0	.
chr1	213720276	213720277	chr1:213720277:G:T	rs114263690	G	T	G	SOX2_HMG_3	32	0	-	0	0	.
chr1	213852365	213852366	chr1:213852366:T:C	rs76628375	T	C	T	SOX2_HMG_3	11	1	+	4.277930028539376	-2.414761469692971	ATTCTATGTTATTGTGA
chr1	213892167	213892168	chr1:213892168:A:G	rs701895	A	G	A	SOX2_HMG_3	-19	0	+	0	0	.
chr1	213892725	213892726	chr1:213892726:C:T	rs143931810	C	T	C	SOX2_HMG_3	-4	0	+	0	0	.
chr1	214051084	214051085	chr1:214051085:T:C	rs17764516	T	C	T	SOX2_HMG_3	-16	0	+	0	0	.
chr1	214303952	214303953	chr1:214303953:C:T	rs6687411	C	T	C	SOX2_HMG_3	-17	0	+	0	0	.
chr1	214303959	214303960	chr1:214303960:G:A	rs78905729	G	A	G	SOX2_HMG_3	-10	0	+	0	0	.
chr1	214322359	214322360	chr1:214322360:T:C	rs11120295	T	C	T	SOX2_HMG_3	-4	0	+	0	0	.
chr1	214665109	214665110	chr1:214665110:A:G	rs112603388	A	G	A	SOX2_HMG_3	-13	0	-	0	0	.
chr1	214865243	214865244	chr1:214865244:G:A	rs10864136	G	A	a	SOX2_HMG_3	36	0	+	0	0	.
chr1	214968226	214968227	chr1:214968227:C:T	rs10494988	C	T	T	SOX2_HMG_3	16	1	+	7.801778675308293	8.998550728448647	GACCAATGAAAGTGATC
chr1	215043514	215043515	chr1:215043515:A:G	rs79649803	A	G	A	SOX2_HMG_3	-10	0	-	0	0	.
chr1	215345966	215345967	chr1:215345967:C:A	rs116817061	C	A	C	SOX2_HMG_3	16	1	-	3.8823046231517946	3.079234181375605	CAGCATTGGAATTGAGG
chr1	215346001	215346002	chr1:215346002:C:T	rs11120571	C	T	T	SOX2_HMG_3	-19	0	-	0	0	.
chr1	215384574	215384575	chr1:215384575:T:C	rs11120584	T	C	C	SOX2_HMG_3	-6	0	+	0	0	.
chr1	215780263	215780264	chr1:215780264:C:T	rs17025416	C	T	C	SOX2_HMG_3	0	1	-	5.950020271063374	5.72942599197808	GATAAATGGTAGTGTGA
chr1	216015355	216015356	chr1:216015356:T:G	rs10779662	T	G	T	SOX2_HMG_3	-7	0	-	0	0	.
chr1	216015365	216015366	chr1:216015366:T:C	rs376931217	T	C	T	SOX2_HMG_3	-17	0	-	0	0	.
chr1	216091045	216091046	chr1:216091046:A:C	rs1544299	A	C	A	SOX2_HMG_3	31	0	+	0	0	.
chr1	216111411	216111412	chr1:216111412:T:C	rs114266744	T	C	T	SOX2_HMG_3	4	1	-	5.177414318731472	-1.7313404605837481	GATCAATGGATTTGGTT
chr1	216560827	216560828	chr1:216560828:C:T	rs569735598	C	T	C	SOX2_HMG_3	32	0	+	0	0	.
chr1	216666771	216666772	chr1:216666772:G:T	rs4532915	G	T	G	SOX2_HMG_3	-4	0	+	0	0	.
chr1	216904465	216904466	chr1:216904466:G:A	rs114661314	G	A	G	SOX2_HMG_3	20	0	+	0	0	.
chr1	217009365	217009366	chr1:217009366:T:A	rs12738035	T	A	T	SOX2_HMG_3	26	0	-	0	0	.
chr1	217063330	217063331	chr1:217063331:T:A	rs1416528	T	A	T	SOX2_HMG_3	23	0	-	0	0	.
chr1	217063367	217063368	chr1:217063368:A:G	rs372061500	A	G	A	SOX2_HMG_3	-14	0	-	0	0	.
chr1	217349123	217349124	chr1:217349124:G:A	rs2646803	G	A	A	SOX2_HMG_3	-2	0	+	0	0	.
chr1	217418557	217418558	chr1:217418558:C:T	rs265119	C	T	T	SOX2_HMG_3	-16	0	-	0	0	.
chr1	217793840	217793841	chr1:217793841:T:C	rs182668956	T	C	C	SOX2_HMG_3	35	0	+	0	0	.
chr1	218496754	218496755	chr1:218496755:G:A	rs146459393	G	A	G	SOX2_HMG_3	11	1	+	5.153626546737259	-0.12198498227513865	AGTCAACATCAGTGATG
chr1	218967686	218967687	chr1:218967687:G:C	rs627486	G	C	C	SOX2_HMG_3	-18	0	+	0	0	.
chr1	219085226	219085227	chr1:219085227:C:A	rs562830861	C	A	C	SOX2_HMG_3	0	1	-	7.186119633000452	6.303723753240464	GATTAATTATATTGAGA
chr1	219220982	219220983	chr1:219220983:A:C	rs9663074	A	C	A	SOX2_HMG_3	-18	0	+	0	0	.
chr1	219310986	219310987	chr1:219310987:G:A	rs10157397	G	A	G	SOX2_HMG_3	32	0	-	0	0	.
chr1	219311021	219311022	chr1:219311022:G:A	rs75103322	G	A	G	SOX2_HMG_3	-3	0	-	0	0	.
chr1	219460314	219460315	chr1:219460315:G:A	rs6689100	G	A	A	SOX2_HMG_3	13	1	+	7.083652741318534	0.17489796200331376	TCTCAATGCAAGTGTAG
chr1	219466962	219466963	chr1:219466963:C:G	rs2605091	C	G	G	SOX2_HMG_3	-14	0	-	0	0	.
chr1	219550063	219550064	chr1:219550064:C:T	rs10735496	C	T	C	SOX2_HMG_3	-10	0	-	0	0	.
chr1	219676381	219676382	chr1:219676382:A:G	rs10746390	A	G	A	SOX2_HMG_3	-12	0	+	0	0	.
chr1	219926727	219926728	chr1:219926728:A:G	rs7525274	A	G	G	SOX2_HMG_3	32	0	+	0	0	.
chr1	219994049	219994050	chr1:219994050:G:C	rs10779393	G	C	C	SOX2_HMG_3	30	0	-	0	0	.
chr1	220067519	220067520	chr1:220067520:A:G	rs17563262	A	G	A	SOX2_HMG_3	5	1	+	4.280139459158065	-2.628615320157156	GATCAATCCTATTTATA
chr1	220067527	220067528	chr1:220067528:T:C	rs141984354	T	C	T	SOX2_HMG_3	13	1	+	4.280139459158065	4.280139459158065	GATCAATCCTATTTATA
chr1	220768093	220768094	chr1:220768094:C:T	rs139836771	C	T	C	SOX2_HMG_3	-2	0	-	0	0	.
chr1	220768101	220768102	chr1:220768102:G:A	rs11118598	G	A	G	SOX2_HMG_3	-10	0	-	0	0	.
chr1	220775362	220775363	chr1:220775363:A:G	rs74387823	A	G	a	SOX2_HMG_3	-20	0	+	0	0	.
chr1	220775373	220775374	chr1:220775374:A:G	rs17008649	A	G	A	SOX2_HMG_3	-9	0	+	0	0	.
chr1	220893760	220893761	chr1:220893761:T:G	rs2807863	T	G	G	SOX2_HMG_3	16	1	+	5.143279159446895	5.946349601223085	TTACAATGTTAGTGTAT
chr1	221188379	221188380	chr1:221188380:A:G	rs9431436	A	G	G	SOX2_HMG_3	25	0	-	0	0	.
chr1	221336459	221336460	chr1:221336460:C:T	rs188270586	C	T	C	SOX2_HMG_3	36	0	-	0	0	.
chr1	221713084	221713085	chr1:221713085:G:A	rs139504652	G	A	G	SOX2_HMG_3	1	1	+	12.298988880884815	14.130636470964106	GGTCAATGTCAGTGTTG
chr1	221713088	221713089	chr1:221713089:A:G	rs149306847	A	G	A	SOX2_HMG_3	5	1	+	12.298988880884815	5.390234101569593	GGTCAATGTCAGTGTTG
chr1	221781279	221781280	chr1:221781280:A:G	rs11804936	A	G	A	SOX2_HMG_3	12	1	-	6.477203606675062	-0.4315511726401594	GGTCAAGTGTATTGAGG
chr1	221794522	221794523	chr1:221794523:A:G	rs4846725	A	G	G	SOX2_HMG_3	27	0	+	0	0	.
chr1	222026324	222026325	chr1:222026325:G:A	rs66732677	G	A	G	SOX2_HMG_3	7	1	+	2.720804744759959	-0.007982375801376174	CATCCATGTTACTGATC
chr1	222048223	222048224	chr1:222048224:T:C	rs2584317	T	C	C	SOX2_HMG_3	23	0	-	0	0	.
chr1	222371371	222371372	chr1:222371372:A:G	rs79403508	A	G	A	SOX2_HMG_3	33	0	-	0	0	.
chr1	222415963	222415964	chr1:222415964:T:C	rs116124097	T	C	T	SOX2_HMG_3	-4	0	+	0	0	.
chr1	222548330	222548331	chr1:222548331:T:C	rs9441911	T	C	C	SOX2_HMG_3	-6	0	+	0	0	.
chr1	222554213	222554214	chr1:222554214:T:C	rs11485178	T	C	T	SOX2_HMG_3	-16	0	-	0	0	.
chr1	222588428	222588429	chr1:222588429:A:G	rs2270705	A	G	A	SOX2_HMG_3	10	1	+	5.6365175005063755	-1.272237278808846	GCTCAATGTTATTATTT
chr1	222802456	222802457	chr1:222802457:A:C	rs79277912	A	C	A	SOX2_HMG_3	3	1	+	2.4738652164239534	9.382619995739175	GGTAAATGGCTTTGATG
chr1	222816417	222816418	chr1:222816418:T:C	rs61838109	T	C	T	SOX2_HMG_3	19	0	-	0	0	.
chr1	222910780	222910781	chr1:222910781:G:T	rs72742237	G	T	G	SOX2_HMG_3	-14	0	+	0	0	.
chr1	223545099	223545100	chr1:223545100:A:G	rs61823525	A	G	a	SOX2_HMG_3	34	0	-	0	0	.
chr1	223666024	223666025	chr1:223666025:A:T	rs10753427	A	T	T	SOX2_HMG_3	-20	0	-	0	0	.
chr1	223920958	223920959	chr1:223920959:A:C	rs4120683	A	C	-	SOX2_HMG_3	-16	0	-	0	0	.
chr1	224212472	224212473	chr1:224212473:A:G	rs6682292	A	G	A	SOX2_HMG_3	31	0	-	0	0	.
chr1	224387315	224387316	chr1:224387316:C:T	rs17503938	C	T	C	SOX2_HMG_3	13	1	-	3.872749505721148	-3.0360052735940726	AATCAATGGTAAAGAAG
chr1	224498879	224498880	chr1:224498880:C:T	rs56081029	C	T	C	SOX2_HMG_3	2	1	-	5.565336830323333	5.565336830323333	GAGCAATGTAAGTGTCT
chr1	224544403	224544404	chr1:224544404:C:T	rs989755	C	T	C	SOX2_HMG_3	-18	0	-	0	0	.
chr1	224673248	224673249	chr1:224673249:C:A	rs6426145	C	A	C	SOX2_HMG_3	-16	0	+	0	0	.
chr1	224738036	224738037	chr1:224738037:C:T	rs7414300	C	T	C	SOX2_HMG_3	-5	0	+	0	0	.
chr1	224799117	224799118	chr1:224799118:C:T	rs2574875	C	T	C	SOX2_HMG_3	34	0	+	0	0	.
chr1	225423628	225423629	chr1:225423629:C:G	rs61851885	C	G	C	SOX2_HMG_3	-3	0	-	0	0	.
chr1	225711165	225711166	chr1:225711166:T:C	rs12031529	T	C	C	SOX2_HMG_3	-17	0	+	0	0	.
chr1	226223247	226223248	chr1:226223248:G:C	rs10753416	G	C	G	SOX2_HMG_3	-11	0	-	0	0	.
chr1	226438872	226438873	chr1:226438873:C:T	rs7527596	C	T	C	SOX2_HMG_3	-4	0	-	0	0	.
chr1	226460961	226460962	chr1:226460962:G:A	rs750426	G	A	G	SOX2_HMG_3	30	0	+	0	0	.
chr1	226559627	226559628	chr1:226559628:G:A	rs6679966	G	A	g	SOX2_HMG_3	-1	0	+	0	0	.
chr1	226724494	226724495	chr1:226724495:C:A	rs3768411	C	A	C	SOX2_HMG_3	21	0	+	0	0	.
chr1	226772673	226772674	chr1:226772674:C:T	rs77167946	C	T	C	SOX2_HMG_3	22	0	+	0	0	.
chr1	226946759	226946760	chr1:226946760:T:A	rs79929620	T	A	T	SOX2_HMG_3	1	1	-	3.132213602012245	0.12616974948893045	CATCACTGGTATGGAAG
chr1	227092181	227092182	chr1:227092182:C:T	rs10799383	C	T	C	SOX2_HMG_3	13	1	-	4.987660342052257	-1.9210944372629635	AATCAGTATTATTGTAA
chr1	227092202	227092203	chr1:227092203:T:C	rs11801093	T	C	T	SOX2_HMG_3	-8	0	-	0	0	.
chr1	227243505	227243506	chr1:227243506:A:C	rs775249708	A	C	a	SOX2_HMG_3	-4	0	+	0	0	.
chr1	227266429	227266430	chr1:227266430:G:A	rs1464076	G	A	G	SOX2_HMG_3	0	1	-	2.3355123388692487	2.1981833608205847	CAGCAGTGTCAGTGTTA
chr1	227320416	227320417	chr1:227320417:T:C	rs72632825	T	C	T	SOX2_HMG_3	-15	0	+	0	0	.
chr1	227415372	227415373	chr1:227415373:T:C	rs1225217330	T	C	T	SOX2_HMG_3	32	0	+	0	0	.
chr1	227944114	227944115	chr1:227944115:A:G	rs564944804	A	G	A	SOX2_HMG_3	0	1	+	2.6572307999089544	2.877825078994248	AAACAGTGGAAGTGATC
chr1	228215814	228215815	chr1:228215815:G:A	rs576248804	G	A	G	SOX2_HMG_3	26	0	+	0	0	.
chr1	228738040	228738041	chr1:228738041:A:C	rs2295255	A	C	A	SOX2_HMG_3	2	1	+	3.8017359179663077	2.665978682328762	AAAAAATTTCAGTGATG
chr1	228795041	228795042	chr1:228795042:A:G	rs1006589245	A	G	A	SOX2_HMG_3	5	1	+	1.5338450013565683	-5.374909777958654	TGTCAAAGGCAATGATA
chr1	228851317	228851318	chr1:228851318:T:C	rs1493085	T	C	T	SOX2_HMG_3	-3	0	-	0	0	.
chr1	228862271	228862272	chr1:228862272:A:C	rs801115	A	C	A	SOX2_HMG_3	15	1	+	4.967975487058601	3.360168767598465	AGTCAATTTAATTAAAG
chr1	228867541	228867542	chr1:228867542:A:T	rs76358892	A	T	A	SOX2_HMG_3	-3	0	+	0	0	.
chr1	228901515	228901516	chr1:228901516:A:C	rs6659427	A	C	A	SOX2_HMG_3	6	1	-	4.016808961716141	-2.8919458175990798	CTGCAATGACAGTGTAA
chr1	229029740	229029741	chr1:229029741:C:A	rs484947	C	A	C	SOX2_HMG_3	20	0	+	0	0	.
chr1	229101096	229101097	chr1:229101097:C:T	rs185355198	C	T	T	SOX2_HMG_3	11	1	-	3.8754209542086566	-1.4001905748037415	AGGCAATAGCAGTGGTG
chr1	229101097	229101098	chr1:229101098:T:C	rs190204259	T	C	T	SOX2_HMG_3	10	1	-	3.8754209542086566	-3.033333825106564	AGGCAATAGCAGTGGTG
chr1	229172103	229172104	chr1:229172104:T:G	rs530525253	T	G	T	SOX2_HMG_3	15	1	-	2.7712839240357363	1.1634772045756006	GAACAATGGCAGTGCAC
chr1	229472418	229472419	chr1:229472419:G:A	rs4925489	G	A	g	SOX2_HMG_3	21	0	+	0	0	.
chr1	229696828	229696829	chr1:229696829:T:C	rs192634580	T	C	T	SOX2_HMG_3	6	1	+	4.202175397107693	-2.7065793822075297	TATCAATGGCAGTCTTC
chr1	230102759	230102760	chr1:230102760:A:G	rs1998067	A	G	A	SOX2_HMG_3	6	1	-	2.267919132767802	-4.640835646547419	CATCAATGGCTATGAAA
chr1	230105366	230105367	chr1:230105367:G:C	rs868287	G	C	G	SOX2_HMG_3	19	0	-	0	0	.
chr1	230105376	230105377	chr1:230105377:A:C	rs868288	A	C	C	SOX2_HMG_3	9	1	-	4.571307135308128	-1.868043235791971	AATCAATGATATGGTGC
chr1	230136823	230136824	chr1:230136824:A:G	rs139910054	A	G	A	SOX2_HMG_3	-7	0	-	0	0	.
chr1	230303234	230303235	chr1:230303235:A:T	rs542400734	A	T	A	SOX2_HMG_3	15	1	-	4.994171654354195	3.7592692176374727	CCTCAAAGGAAGTGATG
chr1	230749262	230749263	chr1:230749263:C:T	rs6541331	C	T	C	SOX2_HMG_3	25	0	+	0	0	.
chr1	230822331	230822332	chr1:230822332:G:A	rs72762619	G	A	G	SOX2_HMG_3	7	1	+	2.8790415969830057	0.15025447642167156	AGCCAGTGTCAGTGATG
chr1	230822341	230822342	chr1:230822342:T:C	rs12125841	T	C	C	SOX2_HMG_3	17	0	+	0	0	.
chr1	230875445	230875446	chr1:230875446:T:C	rs41305721	T	C	C	SOX2_HMG_3	16	1	-	6.296861868599636	6.5705494849899075	ACTCAAAGGCAGTGATA
chr1	231018347	231018348	chr1:231018348:A:G	rs73110142	A	G	A	SOX2_HMG_3	-7	0	+	0	0	.
chr1	231027474	231027475	chr1:231027475:C:T	rs74991536	C	T	C	SOX2_HMG_3	36	0	-	0	0	.
chr1	231140831	231140832	chr1:231140832:A:G	rs6669723	A	G	G	SOX2_HMG_3	-10	0	-	0	0	.
chr1	231387977	231387978	chr1:231387978:G:C	rs2790887	G	C	C	SOX2_HMG_3	-20	0	+	0	0	.
chr1	231388010	231388011	chr1:231388011:G:A	rs2808592	G	A	A	SOX2_HMG_3	13	1	+	10.780956441129806	3.872201661814587	GATCAATATCATTGTAT
chr1	231401796	231401797	chr1:231401797:G:A	rs2749711	G	A	A	SOX2_HMG_3	20	0	-	0	0	.
chr1	231846524	231846525	chr1:231846525:G:A	rs11588799	G	A	G	SOX2_HMG_3	30	0	-	0	0	.
chr1	232502212	232502213	chr1:232502213:T:C	rs6691122	T	C	T	SOX2_HMG_3	18	0	-	0	0	.
chr1	232555959	232555960	chr1:232555960:G:A	rs140725963	G	A	G	SOX2_HMG_3	33	0	+	0	0	.
chr1	232621310	232621311	chr1:232621311:T:G	rs147836436	T	G	T	SOX2_HMG_3	9	1	+	3.3959276108448178	-3.0434227602552806	TTTCAGTGATAGTGAGT
chr1	232845357	232845358	chr1:232845358:G:T	rs115613586	G	T	G	SOX2_HMG_3	9	1	-	2.281322812624718	1.2294176046150356	AATCTGTGTCATTGAGA
chr1	233411970	233411971	chr1:233411971:G:C	rs12128164	G	C	G	SOX2_HMG_3	0	1	+	2.692815271668236	1.9477483699569123	GAGCCATGGCATTGTGA
chr1	233435718	233435719	chr1:233435719:T:A	rs10910173	T	A	T	SOX2_HMG_3	23	0	-	0	0	.
chr1	233459343	233459344	chr1:233459344:C:T	rs6424196	C	T	C	SOX2_HMG_3	-12	0	+	0	0	.
chr1	233582020	233582021	chr1:233582021:C:T	rs17207473	C	T	c	SOX2_HMG_3	-10	0	-	0	0	.
chr1	234281978	234281979	chr1:234281979:C:T	rs143023851	C	T	C	SOX2_HMG_3	34	0	+	0	0	.
chr1	234428456	234428457	chr1:234428457:C:T	rs10797547	C	T	C	SOX2_HMG_3	-6	0	+	0	0	.
chr1	234428458	234428459	chr1:234428459:G:C	rs10797548	G	C	C	SOX2_HMG_3	-4	0	+	0	0	.
chr1	234517498	234517499	chr1:234517499:C:T	rs6668373	C	T	T	SOX2_HMG_3	-18	0	+	0	0	.
chr1	234606378	234606379	chr1:234606379:T:C	rs918895178	T	C	T	SOX2_HMG_3	0	1	-	6.8327104921223505	7.053304771207644	ATACAATTCCAGTGATG
chr1	234776923	234776924	chr1:234776924:G:T	chr1:234776924:G:T	G	T	G	SOX2_HMG_3	8	1	-	7.698909612845294	7.584134098252866	AATCAGTGCAATTGAAA
chr1	234845107	234845108	chr1:234845108:G:A	rs758772776	G	A	G	SOX2_HMG_3	0	1	-	3.7588654586497787	3.621536480601116	CGGCAATTCTATTGTAC
chr1	234934612	234934613	chr1:234934613:T:A	rs2358435	T	A	A	SOX2_HMG_3	5	1	-	5.564079053810802	-1.3446757255044188	AATCAATTTATTTGAGT
chr1	234943778	234943779	chr1:234943779:G:A	rs10910529	G	A	G	SOX2_HMG_3	-18	0	-	0	0	.
chr1	234944262	234944263	chr1:234944263:G:A	rs2802960	G	A	A	SOX2_HMG_3	-18	0	+	0	0	.
chr1	234944316	234944317	chr1:234944317:A:G	rs12405537	A	G	A	SOX2_HMG_3	36	0	+	0	0	.
chr1	235045485	235045486	chr1:235045486:G:A	rs73110938	G	A	G	SOX2_HMG_3	1	1	-	2.7753363514777116	2.7753363514777116	ACGGAATGCTAGTGATG
chr1	235045493	235045494	chr1:235045494:G:A	rs143033999	G	A	G	SOX2_HMG_3	-7	0	-	0	0	.
chr1	235057704	235057705	chr1:235057705:A:G	rs900793485	A	G	A	SOX2_HMG_3	-16	0	-	0	0	.
chr1	235326534	235326535	chr1:235326535:C:T	rs3806394	C	T	C	SOX2_HMG_3	-20	0	+	0	0	.
chr1	235913393	235913394	chr1:235913394:A:T	rs10927030	A	T	A	SOX2_HMG_3	31	0	+	0	0	.
chr1	236334937	236334938	chr1:236334938:C:T	rs12022946	C	T	C	SOX2_HMG_3	-12	0	-	0	0	.
chr1	236692334	236692335	chr1:236692335:A:T	rs35643176	A	T	A	SOX2_HMG_3	16	1	+	2.9846842433457557	2.4553014179598374	AGACAGTGGTATTGACA
chr1	236740490	236740491	chr1:236740491:C:T	rs2385494	C	T	T	SOX2_HMG_3	-4	0	+	0	0	.
chr1	236747836	236747837	chr1:236747837:A:G	rs10925211	A	G	A	SOX2_HMG_3	12	1	-	5.310467342404496	-1.5982874369107234	AATGAATACCAGTGATT
chr1	236905723	236905724	chr1:236905724:G:A	rs144767736	G	A	G	SOX2_HMG_3	19	0	+	0	0	.
chr1	237109619	237109620	chr1:237109620:C:T	rs17669728	C	T	C	SOX2_HMG_3	-18	0	+	0	0	.
chr1	237391152	237391153	chr1:237391153:G:A	rs12082285	G	A	A	SOX2_HMG_3	-6	0	-	0	0	.
chr1	238255677	238255678	chr1:238255678:G:A	rs2893632	G	A	G	SOX2_HMG_3	-17	0	+	0	0	.
chr1	238255696	238255697	chr1:238255697:T:C	rs75705169	T	C	T	SOX2_HMG_3	2	1	+	3.372451513419202	-1.6309205568963847	GATGAATGCCAGTGGAA
chr1	238475811	238475812	chr1:238475812:T:C	rs10733121	T	C	C	SOX2_HMG_3	12	1	+	2.968488603192679	-3.9402661761225413	GATAAATGGTAGTGCTT
chr1	238501469	238501470	chr1:238501470:G:A	rs10802697	G	A	g	SOX2_HMG_3	-7	0	+	0	0	.
chr1	238625050	238625051	chr1:238625051:G:A	rs1393642	G	A	A	SOX2_HMG_3	-2	0	-	0	0	.
chr1	239213160	239213161	chr1:239213161:A:G	rs539626261	A	G	A	SOX2_HMG_3	11	1	-	5.491677101354552	-1.201014396877795	GAAAAATGGAATTGATT
chr1	239405590	239405591	chr1:239405591:A:G	rs72754656	A	G	A	SOX2_HMG_3	11	1	-	5.197313026278682	-1.4953784719536647	GAAAAATGTAATTGAAG
chr1	239508172	239508173	chr1:239508173:T:C	rs6675823	T	C	T	SOX2_HMG_3	-12	0	-	0	0	.
chr1	239722509	239722510	chr1:239722510:C:A	rs1431721	C	A	C	SOX2_HMG_3	2	1	-	3.3109734338913626	7.178588268569404	AGGCAATGATATTAAGA
chr1	239795367	239795368	chr1:239795368:C:T	rs619288	C	T	C	SOX2_HMG_3	-20	0	+	0	0	.
chr1	239900065	239900066	chr1:239900066:T:C	rs16839051	T	C	C	SOX2_HMG_3	28	0	-	0	0	.
chr1	240100251	240100252	chr1:240100252:C:G	rs11589947	C	G	C	SOX2_HMG_3	-9	0	+	0	0	.
chr1	240290327	240290328	chr1:240290328:G:A	rs10754697	G	A	G	SOX2_HMG_3	-7	0	-	0	0	.
chr1	240310268	240310269	chr1:240310269:T:C	rs6697484	T	C	T	SOX2_HMG_3	31	0	-	0	0	.
chr1	240327415	240327416	chr1:240327416:A:G	rs10495464	A	G	G	SOX2_HMG_3	-6	0	+	0	0	.
chr1	240362897	240362898	chr1:240362898:C:G	rs146766110	C	G	C	SOX2_HMG_3	-14	0	-	0	0	.
chr1	240455414	240455415	chr1:240455415:A:G	rs983962055	A	G	A	SOX2_HMG_3	14	1	-	5.1994699348354825	1.079945074083083	TCTCAATTGTAGTGTGC
chr1	240527130	240527131	chr1:240527131:C:T	rs12034261	C	T	T	SOX2_HMG_3	24	0	+	0	0	.
chr1	240539759	240539760	chr1:240539760:C:T	rs80285190	C	T	C	SOX2_HMG_3	3	1	+	7.227070932101427	0.3183161527862055	CTGCAATGTTATTGTAA
chr1	240608979	240608980	chr1:240608980:C:T	rs188152073	C	T	C	SOX2_HMG_3	-3	0	-	0	0	.
chr1	240608995	240608996	chr1:240608996:G:A	rs142931648	G	A	G	SOX2_HMG_3	-19	0	-	0	0	.
chr1	241349475	241349476	chr1:241349476:G:A	rs34491653	G	A	G	SOX2_HMG_3	-2	0	+	0	0	.
chr1	241557529	241557530	chr1:241557530:A:G	rs3007736	A	G	A	SOX2_HMG_3	2	1	-	4.12234362429938	-0.8810284460162059	AATCAACTAAAGTGAAA
chr1	241605662	241605663	chr1:241605663:C:A	rs6429282	C	A	A	SOX2_HMG_3	-19	0	-	0	0	.
chr1	241979533	241979534	chr1:241979534:C:T	rs112832098	C	T	C	SOX2_HMG_3	-5	0	-	0	0	.
chr1	242242543	242242544	chr1:242242544:G:A	rs383373	G	A	G	SOX2_HMG_3	-11	0	-	0	0	.
chr1	243939512	243939513	chr1:243939513:C:G	rs148557837	C	G	C	SOX2_HMG_3	-2	0	-	0	0	.
chr1	244294439	244294440	chr1:244294440:C:T	rs80311739	C	T	C	SOX2_HMG_3	22	0	-	0	0	.
chr1	244299306	244299307	chr1:244299307:G:T	rs372904952	G	T	G	SOX2_HMG_3	22	0	-	0	0	.
chr1	244325426	244325427	chr1:244325427:T:C	rs74982651	T	C	T	SOX2_HMG_3	-8	0	-	0	0	.
chr1	244327519	244327520	chr1:244327520:T:G	rs35045024	T	G	T	SOX2_HMG_3	8	1	+	6.616507320967525	6.479039401102862	ACTCAATGTCCTTGAAA
chr1	244340417	244340418	chr1:244340418:C:G	rs533108	C	G	C	SOX2_HMG_3	20	0	-	0	0	.
chr1	244347134	244347135	chr1:244347135:G:A	rs900895	G	A	G	SOX2_HMG_3	29	0	-	0	0	.
chr1	244360201	244360202	chr1:244360202:A:G	rs10927210	A	G	A	SOX2_HMG_3	-14	0	+	0	0	.
chr1	244447747	244447748	chr1:244447748:C:T	rs182063209	C	T	C	SOX2_HMG_3	36	0	-	0	0	.
chr1	244838499	244838500	chr1:244838500:A:G	rs78655555	A	G	A	SOX2_HMG_3	5	1	+	5.090684907498882	-1.8180698718163384	TGTCAATGAAATAGAAA
chr1	244893510	244893511	chr1:244893511:A:G	rs75575377	A	G	A	SOX2_HMG_3	8	1	+	2.5883206014425606	3.43736454880619	TGTAAATGACAGTGACT
chr1	245277948	245277949	chr1:245277949:G:A	rs9660396	G	A	A	SOX2_HMG_3	30	0	-	0	0	.
chr1	245449481	245449482	chr1:245449482:A:G	rs2298106	A	G	G	SOX2_HMG_3	-20	0	-	0	0	.
chr1	245878113	245878114	chr1:245878114:C:T	rs12038841	C	T	C	SOX2_HMG_3	29	0	+	0	0	.
chr1	245957212	245957213	chr1:245957213:G:A	rs10924403	G	A	A	SOX2_HMG_3	-8	0	-	0	0	.
chr1	245990836	245990837	chr1:245990837:T:C	rs10924427	T	C	C	SOX2_HMG_3	5	1	-	2.576328474310958	-4.3324263050042635	AATCAATGGCTTTAAAA
chr1	245997309	245997310	chr1:245997310:A:G	rs36107675	A	G	A	SOX2_HMG_3	0	1	+	4.43259324239211	4.653187521477403	AATCAACTTCATTGTGA
chr1	246297949	246297950	chr1:246297950:G:A	rs12039645	G	A	G	SOX2_HMG_3	16	1	+	4.440990099465308	4.167302483075036	TGCCAATGTTATTTATG
chr1	246446053	246446054	chr1:246446054:T:C	rs1890162	T	C	T	SOX2_HMG_3	-4	0	-	0	0	.
chr1	246503693	246503694	chr1:246503694:G:A	rs10924758	G	A	G	SOX2_HMG_3	33	0	+	0	0	.
chr1	246588554	246588555	chr1:246588555:A:G	rs74495912	A	G	A	SOX2_HMG_3	10	1	+	2.3154820292733724	-4.593272750041848	AGGCAATGTCATAGACA
chr1	247177891	247177892	chr1:247177892:C:T	rs4344362	C	T	c	SOX2_HMG_3	19	0	-	0	0	.
chr1	247497201	247497202	chr1:247497202:A:G	rs72773758	A	G	A	SOX2_HMG_3	-1	0	+	0	0	.
chr1	247497233	247497234	chr1:247497234:T:C	rs74152612	T	C	T	SOX2_HMG_3	31	0	+	0	0	.
chr1	248889006	248889007	chr1:248889007:A:G	rs12752429	A	G	G	SOX2_HMG_3	14	1	-	4.802007995525509	0.6824831347731097	CATCAAAGCCAGTGTTT
chr10	105577	105578	chr10:105578:C:T	rs56399331	C	T	C	SOX2_HMG_3	27	0	-	0	0	.
chr10	105582	105583	chr10:105583:C:T	rs369616262	C	T	C	SOX2_HMG_3	22	0	-	0	0	.
chr10	230860	230861	chr10:230861:G:A	rs138359068	G	A	G	SOX2_HMG_3	18	0	+	0	0	.
chr10	382149	382150	chr10:382150:C:G	rs4881199	C	G	C	SOX2_HMG_3	26	0	-	0	0	.
chr10	493366	493367	chr10:493367:A:C	rs76338795	A	C	A	SOX2_HMG_3	8	1	-	5.440673556189722	5.30320563632506	AATCAATGTCATGGGAA
chr10	718845	718846	chr10:718846:G:T	rs11253340	G	T	G	SOX2_HMG_3	23	0	-	0	0	.
chr10	787537	787538	chr10:787538:G:A	rs74578197	G	A	g	SOX2_HMG_3	-13	0	-	0	0	.
chr10	873091	873092	chr10:873092:G:C	rs34885925	G	C	G	SOX2_HMG_3	20	0	-	0	0	.
chr10	1020656	1020657	chr10:1020657:T:C	rs116453469	T	C	T	SOX2_HMG_3	-13	0	+	0	0	.
chr10	1020694	1020695	chr10:1020695:A:G	rs917674193	A	G	A	SOX2_HMG_3	25	0	+	0	0	.
chr10	1099241	1099242	chr10:1099242:A:G	rs17155886	A	G	A	SOX2_HMG_3	-4	0	+	0	0	.
chr10	1142788	1142789	chr10:1142789:C:A	chr10:1142789:C:A	C	A	C	SOX2_HMG_3	31	0	-	0	0	.
chr10	1156704	1156705	chr10:1156705:G:A	rs749747255	G	A	G	SOX2_HMG_3	-18	0	-	0	0	.
chr10	1293653	1293654	chr10:1293654:A:G	rs1027604	A	G	A	SOX2_HMG_3	-1	0	-	0	0	.
chr10	1623015	1623016	chr10:1623016:C:T	rs10082419	C	T	C	SOX2_HMG_3	36	0	-	0	0	.
chr10	1754699	1754700	chr10:1754700:G:C	rs191539354	G	C	G	SOX2_HMG_3	18	0	+	0	0	.
chr10	1754700	1754701	chr10:1754701:C:T	rs183798758	C	T	C	SOX2_HMG_3	19	0	+	0	0	.
chr10	1754716	1754717	chr10:1754717:A:G	rs916295334	A	G	A	SOX2_HMG_3	35	0	+	0	0	.
chr10	2014214	2014215	chr10:2014215:C:G	rs7086568	C	G	C	SOX2_HMG_3	26	0	+	0	0	.
chr10	2227738	2227739	chr10:2227739:C:T	rs7919624	C	T	T	SOX2_HMG_3	-15	0	+	0	0	.
chr10	2367190	2367191	chr10:2367191:A:G	rs17158213	A	G	A	SOX2_HMG_3	33	0	+	0	0	.
chr10	2384664	2384665	chr10:2384665:C:T	rs826497	C	T	c	SOX2_HMG_3	-12	0	+	0	0	.
chr10	2401015	2401016	chr10:2401016:T:C	rs12783082	T	C	T	SOX2_HMG_3	12	1	-	3.087992946561765	3.087992946561765	AATCAATGTTATAAAGA
chr10	2495489	2495490	chr10:2495490:G:A	rs61835717	G	A	G	SOX2_HMG_3	28	0	-	0	0	.
chr10	2632265	2632266	chr10:2632266:C:T	rs6601818	C	T	C	SOX2_HMG_3	0	1	+	5.608678129462556	5.471349151413891	CATCAATGCTAGTTTTT
chr10	2658988	2658989	chr10:2658989:G:A	rs1413759	G	A	G	SOX2_HMG_3	23	0	+	0	0	.
chr10	2681300	2681301	chr10:2681301:G:A	rs17182743	G	A	A	SOX2_HMG_3	26	0	+	0	0	.
chr10	2990764	2990765	chr10:2990765:C:T	rs4881045	C	T	c	SOX2_HMG_3	24	0	+	0	0	.
chr10	3081240	3081241	chr10:3081241:T:C	rs882849	T	C	t	SOX2_HMG_3	-7	0	+	0	0	.
chr10	3229982	3229983	chr10:3229983:A:G	rs147639414	A	G	A	SOX2_HMG_3	-15	0	+	0	0	.
chr10	3690264	3690265	chr10:3690265:T:A	rs78633935	T	A	T	SOX2_HMG_3	17	0	+	0	0	.
chr10	3776854	3776855	chr10:3776855:G:A	rs114433167	G	A	G	SOX2_HMG_3	-6	0	-	0	0	.
chr10	3776993	3776994	chr10:3776994:T:C	rs79041010	T	C	T	SOX2_HMG_3	29	0	+	0	0	.
chr10	3948474	3948475	chr10:3948475:T:A	rs76343333	T	A	T	SOX2_HMG_3	-5	0	-	0	0	.
chr10	4196429	4196430	chr10:4196430:T:C	rs879913	T	C	T	SOX2_HMG_3	-14	0	-	0	0	.
chr10	4246917	4246918	chr10:4246918:A:T	rs10751964	A	T	A	SOX2_HMG_3	35	0	-	0	0	.
chr10	4310505	4310506	chr10:4310506:G:T	rs10904225	G	T	G	SOX2_HMG_3	-6	0	+	0	0	.
chr10	4412272	4412273	chr10:4412273:G:T	rs1751306	G	T	G	SOX2_HMG_3	31	0	+	0	0	.
chr10	4480382	4480383	chr10:4480383:A:G	rs77168358	A	G	A	SOX2_HMG_3	-17	0	+	0	0	.
chr10	4658775	4658776	chr10:4658776:A:G	rs10508287	A	G	A	SOX2_HMG_3	31	0	+	0	0	.
chr10	4770961	4770962	chr10:4770962:A:G	rs11818567	A	G	A	SOX2_HMG_3	33	0	-	0	0	.
chr10	4816135	4816136	chr10:4816136:T:C	rs12769532	T	C	T	SOX2_HMG_3	19	0	+	0	0	.
chr10	4816138	4816139	chr10:4816139:A:G	rs146281443	A	G	A	SOX2_HMG_3	22	0	+	0	0	.
chr10	4848975	4848976	chr10:4848976:C:T	rs1993181	C	T	C	SOX2_HMG_3	-1	0	-	0	0	.
chr10	4957111	4957112	chr10:4957112:G:A	rs4596966	G	A	G	SOX2_HMG_3	-4	0	+	0	0	.
chr10	5009339	5009340	chr10:5009340:G:A	rs1937863	G	A	G	SOX2_HMG_3	34	0	-	0	0	.
chr10	5009378	5009379	chr10:5009379:C:A	rs113767262	C	A	C	SOX2_HMG_3	-5	0	-	0	0	.
chr10	5081314	5081315	chr10:5081315:T:G	rs6601901	T	G	T	SOX2_HMG_3	8	1	+	6.083986561501838	5.946518641637176	ATTCAGTTTTATTGATT
chr10	5090953	5090954	chr10:5090954:C:T	rs11252933	C	T	C	SOX2_HMG_3	15	1	+	2.56511591754983	5.407825073726688	GACCATTGGCATTGACT
chr10	5096179	5096180	chr10:5096180:T:G	rs2801882	T	G	T	SOX2_HMG_3	22	0	-	0	0	.
chr10	5128420	5128421	chr10:5128421:T:A	rs11517339	T	A	A	SOX2_HMG_3	-9	0	-	0	0	.
chr10	5291182	5291183	chr10:5291183:G:C	rs12771527	G	C	g	SOX2_HMG_3	32	0	-	0	0	.
chr10	5382763	5382764	chr10:5382764:A:G	rs11253143	A	G	A	SOX2_HMG_3	15	1	+	4.565563210938454	4.133089629387554	AAGCAAAGGAATTGAAA
chr10	5443305	5443306	chr10:5443306:T:C	rs10904504	T	C	T	SOX2_HMG_3	5	1	-	3.5732729966666636	-3.3354817826485568	TCTCAATTTTAGAGAAG
chr10	5447222	5447223	chr10:5447223:G:T	rs60426135	G	T	G	SOX2_HMG_3	-9	0	+	0	0	.
chr10	5501382	5501383	chr10:5501383:T:C	rs12412562	T	C	T	SOX2_HMG_3	30	0	-	0	0	.
chr10	5667187	5667188	chr10:5667188:A:T	rs3814200	A	T	T	SOX2_HMG_3	-1	0	-	0	0	.
chr10	5853397	5853398	chr10:5853398:G:A	rs11255555	G	A	G	SOX2_HMG_3	36	0	+	0	0	.
chr10	6253584	6253585	chr10:6253585:T:C	rs10508301	T	C	T	SOX2_HMG_3	21	0	-	0	0	.
chr10	6491914	6491915	chr10:6491915:A:G	rs3815975	A	G	A	SOX2_HMG_3	12	1	-	5.3615767102654015	-1.5471780690498187	ACACAATGCCAGTGTTT
chr10	6491937	6491938	chr10:6491938:C:T	rs3815974	C	T	C	SOX2_HMG_3	-11	0	-	0	0	.
chr10	6564323	6564324	chr10:6564324:A:G	rs4748152	A	G	A	SOX2_HMG_3	24	0	-	0	0	.
chr10	6669228	6669229	chr10:6669229:C:G	rs11813112	C	G	C	SOX2_HMG_3	25	0	-	0	0	.
chr10	6766744	6766745	chr10:6766745:G:C	chr10:6766745:G:C	G	C	G	SOX2_HMG_3	17	0	+	0	0	.
chr10	6766750	6766751	chr10:6766751:G:A	rs4747303	G	A	G	SOX2_HMG_3	23	0	+	0	0	.
chr10	6986760	6986761	chr10:6986761:C:T	rs882778	C	T	C	SOX2_HMG_3	33	0	-	0	0	.
chr10	7090962	7090963	chr10:7090963:G:A	rs1192347530	G	A	G	SOX2_HMG_3	-18	0	-	0	0	.
chr10	7179975	7179976	chr10:7179976:A:G	rs2762617	A	G	G	SOX2_HMG_3	10	1	+	4.041602484567559	-2.8671522947476618	AAGCCATGGCAGTGAGG
chr10	7345860	7345861	chr10:7345861:C:T	rs61837686	C	T	C	SOX2_HMG_3	-18	0	-	0	0	.
chr10	7383823	7383824	chr10:7383824:T:C	rs4748900	T	C	T	SOX2_HMG_3	21	0	+	0	0	.
chr10	7442376	7442377	chr10:7442377:C:G	rs12245350	C	G	C	SOX2_HMG_3	12	1	-	3.413152816289223	3.413152816289223	GAACAATGACAGGGAGG
chr10	7494344	7494345	chr10:7494345:C:T	rs2388139	C	T	T	SOX2_HMG_3	29	0	-	0	0	.
chr10	7686803	7686804	chr10:7686804:C:T	rs72781022	C	T	C	SOX2_HMG_3	33	0	+	0	0	.
chr10	7782251	7782252	chr10:7782252:A:G	rs10905231	A	G	G	SOX2_HMG_3	-6	0	+	0	0	.
chr10	8035272	8035273	chr10:8035273:C:G	rs115124036	C	G	C	SOX2_HMG_3	-14	0	+	0	0	.
chr10	8086347	8086348	chr10:8086348:T:A	rs794659	T	A	T	SOX2_HMG_3	6	1	+	3.324541801624102	-3.584212977691119	TCACAATGGTATTGGGC
chr10	8179069	8179070	chr10:8179070:T:A	rs477752	T	A	T	SOX2_HMG_3	5	1	-	3.3175049840729023	-3.5912497952423172	CCCCAATTCAAGTGATT
chr10	8296000	8296001	chr10:8296001:C:G	rs4749740	C	G	g	SOX2_HMG_3	30	0	+	0	0	.
chr10	8402454	8402455	chr10:8402455:G:A	rs7898386	G	A	G	SOX2_HMG_3	21	0	+	0	0	.
chr10	8405184	8405185	chr10:8405185:G:C	rs1338055	G	C	C	SOX2_HMG_3	19	0	-	0	0	.
chr10	8405186	8405187	chr10:8405187:C:A	rs2065991	C	A	C	SOX2_HMG_3	17	0	-	0	0	.
chr10	8420475	8420476	chr10:8420476:T:C	rs2993385	T	C	T	SOX2_HMG_3	-16	0	+	0	0	.
chr10	8677848	8677849	chr10:8677849:C:T	rs11255824	C	T	C	SOX2_HMG_3	34	0	+	0	0	.
chr10	8689291	8689292	chr10:8689292:C:T	rs7912831	C	T	T	SOX2_HMG_3	-19	0	+	0	0	.
chr10	9026688	9026689	chr10:9026689:G:C	rs1149912	G	C	C	SOX2_HMG_3	3	1	-	5.387311746963309	-1.521443032351911	AGTCAATGACAGAGAAA
chr10	9037712	9037713	chr10:9037713:A:C	rs2760196	A	C	C	SOX2_HMG_3	19	0	+	0	0	.
chr10	9038062	9038063	chr10:9038063:G:C	rs1891532	G	C	G	SOX2_HMG_3	-12	0	+	0	0	.
chr10	9066354	9066355	chr10:9066355:T:C	rs10795689	T	C	C	SOX2_HMG_3	-15	0	-	0	0	.
chr10	9110741	9110742	chr10:9110742:T:C	rs17364530	T	C	T	SOX2_HMG_3	6	1	+	3.2004753019426797	-3.7082794773725407	TGACAATGGCATTGCAA
chr10	9188550	9188551	chr10:9188551:A:G	rs7094402	A	G	A	SOX2_HMG_3	5	1	+	4.8029149588364755	-2.105839820478745	TGTCAATTCTACTGAGA
chr10	9357724	9357725	chr10:9357725:A:T	rs146035117	A	T	a	SOX2_HMG_3	5	1	+	2.914087280064549	-3.994667499250671	GTCCAATGTTATTAAAG
chr10	9628037	9628038	chr10:9628038:A:G	rs1338724	A	G	A	SOX2_HMG_3	-8	0	+	0	0	.
chr10	9862006	9862007	chr10:9862007:C:G	rs17146593	C	G	C	SOX2_HMG_3	21	0	-	0	0	.
chr10	10045344	10045345	chr10:10045345:G:T	rs79249198	G	T	G	SOX2_HMG_3	-14	0	+	0	0	.
chr10	10094202	10094203	chr10:10094203:C:T	rs12264789	C	T	C	SOX2_HMG_3	24	0	+	0	0	.
chr10	10096205	10096206	chr10:10096206:T:C	rs11256490	T	C	C	SOX2_HMG_3	-16	0	+	0	0	.
chr10	10402312	10402313	chr10:10402313:A:G	rs1891399	A	G	G	SOX2_HMG_3	20	0	-	0	0	.
chr10	10794120	10794121	chr10:10794121:C:T	rs11592096	C	T	C	SOX2_HMG_3	-7	0	-	0	0	.
chr10	10887491	10887492	chr10:10887492:G:A	rs78716408	G	A	G	SOX2_HMG_3	-6	0	-	0	0	.
chr10	11034711	11034712	chr10:11034712:G:C	rs4372351	G	C	G	SOX2_HMG_3	-20	0	+	0	0	.
chr10	11157307	11157308	chr10:11157308:G:A	rs73575699	G	A	A	SOX2_HMG_3	29	0	-	0	0	.
chr10	11181982	11181983	chr10:11181983:T:C	rs117944575	T	C	T	SOX2_HMG_3	-12	0	+	0	0	.
chr10	11190615	11190616	chr10:11190616:T:A	rs622981	T	A	T	SOX2_HMG_3	-4	0	-	0	0	.
chr10	11202636	11202637	chr10:11202637:G:A	rs752379	G	A	G	SOX2_HMG_3	-3	0	-	0	0	.
chr10	11312663	11312664	chr10:11312664:G:C	rs11257054	G	C	G	SOX2_HMG_3	35	0	+	0	0	.
chr10	11397902	11397903	chr10:11397903:T:C	rs3847432	T	C	T	SOX2_HMG_3	4	1	-	5.449939193652721	-1.4588155856624976	AGTCAAGTGCATTGAGG
chr10	11527824	11527825	chr10:11527825:C:T	rs11257153	C	T	T	SOX2_HMG_3	27	0	-	0	0	.
chr10	11818333	11818334	chr10:11818334:T:C	rs58829444	T	C	C	SOX2_HMG_3	36	0	-	0	0	.
chr10	12018994	12018995	chr10:12018995:A:C	rs1722442	A	C	A	SOX2_HMG_3	29	0	+	0	0	.
chr10	12057023	12057024	chr10:12057024:A:G	rs11257506	A	G	A	SOX2_HMG_3	17	0	-	0	0	.
chr10	12057051	12057052	chr10:12057052:A:C	rs12766968	A	C	A	SOX2_HMG_3	-11	0	-	0	0	.
chr10	12113558	12113559	chr10:12113559:A:G	rs193273294	A	G	A	SOX2_HMG_3	5	1	+	6.2433445895488475	-0.6654101897663727	TGTCAATTGTAATGAAG
chr10	12203601	12203602	chr10:12203602:A:G	rs938991	A	G	G	SOX2_HMG_3	28	0	-	0	0	.
chr10	12482637	12482638	chr10:12482638:G:A	rs17491614	G	A	G	SOX2_HMG_3	31	0	-	0	0	.
chr10	12490545	12490546	chr10:12490546:C:T	rs2478973	C	T	T	SOX2_HMG_3	-7	0	-	0	0	.
chr10	12498800	12498801	chr10:12498801:C:T	rs11257832	C	T	C	SOX2_HMG_3	-8	0	-	0	0	.
chr10	12649576	12649577	chr10:12649577:T:C	rs17495691	T	C	T	SOX2_HMG_3	28	0	+	0	0	.
chr10	12778211	12778212	chr10:12778212:G:A	rs3802569	G	A	A	SOX2_HMG_3	31	0	-	0	0	.
chr10	12827000	12827001	chr10:12827001:A:G	rs1644392	A	G	A	SOX2_HMG_3	14	1	+	3.4955186279091017	-0.6863589893920172	TATCAAGGCTTTTGATG
chr10	13062872	13062873	chr10:13062873:A:G	rs12261949	A	G	A	SOX2_HMG_3	31	0	-	0	0	.
chr10	13062887	13062888	chr10:13062888:G:A	rs12268703	G	A	G	SOX2_HMG_3	16	1	-	4.246237805292053	5.443009858432407	GAGCAAGTTTATTGATC
chr10	13233509	13233510	chr10:13233510:C:G	rs7893239	C	G	G	SOX2_HMG_3	35	0	-	0	0	.
chr10	13241806	13241807	chr10:13241807:A:G	rs17152990	A	G	A	SOX2_HMG_3	11	1	-	9.507341445816479	2.8146499475841313	AGTCAATGCCATTGTCA
chr10	13417265	13417266	chr10:13417266:T:C	rs75818818	T	C	t	SOX2_HMG_3	6	1	+	3.403770268717048	-3.5049845105981725	CGTGAATGGAATTGGTG
chr10	13674799	13674800	chr10:13674800:A:G	rs77861426	A	G	A	SOX2_HMG_3	-10	0	-	0	0	.
chr10	13789246	13789247	chr10:13789247:T:C	rs557861587	T	C	T	SOX2_HMG_3	11	1	+	2.6399763976842623	-4.052715100548085	CATCATTGTTATTGCGA
chr10	13830628	13830629	chr10:13830629:T:C	rs80207127	T	C	C	SOX2_HMG_3	5	1	+	4.632414979941178	4.632414979941178	CAGCATTGCCATTGAAG
chr10	13830659	13830660	chr10:13830660:C:T	rs116097186	C	T	T	SOX2_HMG_3	36	0	+	0	0	.
chr10	13908780	13908781	chr10:13908781:C:T	rs2698132	C	T	C	SOX2_HMG_3	2	1	-	4.647386647159593	4.647386647159593	TGGCAATGCTACTGATA
chr10	13922278	13922279	chr10:13922279:T:C	rs2178283	T	C	T	SOX2_HMG_3	5	1	-	2.8606237400363135	-4.048131039278906	CACCAATGTAAGGGATA
chr10	14017438	14017439	chr10:14017439:G:A	rs73591211	G	A	G	SOX2_HMG_3	28	0	+	0	0	.
chr10	14078393	14078394	chr10:14078394:C:T	rs12243426	C	T	C	SOX2_HMG_3	24	0	+	0	0	.
chr10	14546601	14546602	chr10:14546602:T:G	rs7079377	T	G	G	SOX2_HMG_3	14	1	-	2.322202368999849	-4.510096336566843	GCTCAATGGTAATAATG
chr10	14648094	14648095	chr10:14648095:A:G	rs36025028	A	G	A	SOX2_HMG_3	11	1	-	6.217146914446996	-0.47554458378535097	GATCATTTTAATTGAAT
chr10	14684505	14684506	chr10:14684506:G:A	rs114562619	G	A	G	SOX2_HMG_3	-5	0	-	0	0	.
chr10	14995671	14995672	chr10:14995672:G:T	rs4333919	G	T	-	SOX2_HMG_3	7	1	+	5.810321440566394	3.7656109358328567	CCCCAATGATATTGTTT
chr10	15013362	15013363	chr10:15013363:T:C	rs11259435	T	C	-	SOX2_HMG_3	22	0	-	0	0	.
chr10	15149147	15149148	chr10:15149148:C:T	rs61844188	C	T	T	SOX2_HMG_3	0	1	-	10.488025756372805	10.267431477287511	GATCAATGGTAGTGGCG
chr10	15324806	15324807	chr10:15324807:T:A	rs374976522	T	A	T	SOX2_HMG_3	-4	0	-	0	0	.
chr10	15690381	15690382	chr10:15690382:C:T	rs12257212	C	T	C	SOX2_HMG_3	34	0	-	0	0	.
chr10	15787234	15787235	chr10:15787235:C:T	rs114604854	C	T	C	SOX2_HMG_3	36	0	+	0	0	.
chr10	15789755	15789756	chr10:15789756:C:T	rs7923731	C	T	T	SOX2_HMG_3	9	1	+	3.846603927783301	4.653274061720347	AAGGAATGTCAGTGATC
chr10	15850682	15850683	chr10:15850683:G:T	rs111580233	G	T	T	SOX2_HMG_3	0	1	-	4.633718562824201	5.15819118545023	CGGCATTGTCATTGATA
chr10	16466179	16466180	chr10:16466180:C:G	rs6602120	C	G	G	SOX2_HMG_3	18	0	+	0	0	.
chr10	16466465	16466466	chr10:16466466:A:G	rs7921034	A	G	G	SOX2_HMG_3	20	0	+	0	0	.
chr10	16479007	16479008	chr10:16479008:T:G	rs7905643	T	G	G	SOX2_HMG_3	17	0	-	0	0	.
chr10	16518738	16518739	chr10:16518739:A:C	rs11254045	A	C	A	SOX2_HMG_3	0	1	-	5.09368527392751	5.976081153687497	TATCAATTAAAATGAAA
chr10	16786184	16786185	chr10:16786185:T:A	rs78558872	T	A	T	SOX2_HMG_3	-7	0	+	0	0	.
chr10	16962559	16962560	chr10:16962560:G:T	rs1687714	G	T	T	SOX2_HMG_3	-16	0	+	0	0	.
chr10	16969263	16969264	chr10:16969264:T:C	rs11593686	T	C	T	SOX2_HMG_3	28	0	-	0	0	.
chr10	16969298	16969299	chr10:16969299:C:T	rs1828624	C	T	C	SOX2_HMG_3	-7	0	-	0	0	.
chr10	16999759	16999760	chr10:16999760:T:C	rs7921270	T	C	T	SOX2_HMG_3	31	0	-	0	0	.
chr10	16999956	16999957	chr10:16999957:T:C	rs147612925	T	C	T	SOX2_HMG_3	6	1	+	3.038595507506782	-3.8701592718084386	CGTCCATGGCAGTGGTG
chr10	17001817	17001818	chr10:17001818:T:G	rs3847368	T	G	T	SOX2_HMG_3	8	1	-	3.9902068799650974	4.104982394557526	AAATAATGAAATTGAAG
chr10	17059498	17059499	chr10:17059499:C:A	rs151235084	C	A	C	SOX2_HMG_3	-7	0	-	0	0	.
chr10	17110994	17110995	chr10:17110995:G:A	rs1801223	G	A	G	SOX2_HMG_3	24	0	-	0	0	.
chr10	17474766	17474767	chr10:17474767:C:A	rs7086483	C	A	A	SOX2_HMG_3	-2	0	+	0	0	.
chr10	17498410	17498411	chr10:17498411:A:C	rs1753370	A	C	C	SOX2_HMG_3	6	1	-	3.219832193833591	-3.6889225854816283	CACCAATTCTCTTGATA
chr10	17646185	17646186	chr10:17646186:G:C	chr10:17646186:G:C	G	C	G	SOX2_HMG_3	-10	0	+	0	0	.
chr10	17673462	17673463	chr10:17673463:C:T	rs116343068	C	T	C	SOX2_HMG_3	1	1	+	4.58499959499828	4.58499959499828	TCGCAATGACAGTGTTT
chr10	17758946	17758947	chr10:17758947:C:A	rs2461170	C	A	A	SOX2_HMG_3	3	1	+	2.599034584778383	-4.309720194536835	CCTCCATGCCAGTGTTG
chr10	18060297	18060298	chr10:18060298:T:G	rs80269453	T	G	T	SOX2_HMG_3	33	0	-	0	0	.
chr10	18100926	18100927	chr10:18100927:G:C	rs16916853	G	C	G	SOX2_HMG_3	35	0	-	0	0	.
chr10	18387557	18387558	chr10:18387558:T:A	rs7074429	T	A	A	SOX2_HMG_3	10	1	-	3.2490766004911404	-3.659678178824079	AATCATTGGAAATGATG
chr10	18607888	18607889	chr10:18607889:C:G	chr10:18607889:C:G	C	G	C	SOX2_HMG_3	-9	0	+	0	0	.
chr10	18761142	18761143	chr10:18761143:C:G	rs10763631	C	G	C	SOX2_HMG_3	-13	0	-	0	0	.
chr10	18920982	18920983	chr10:18920983:A:G	rs192721803	A	G	A	SOX2_HMG_3	11	1	-	5.288381317247636	-1.4043101809847105	AACAAATGGTATTGAAA
chr10	19660302	19660303	chr10:19660303:A:T	rs1326978	A	T	A	SOX2_HMG_3	-14	0	+	0	0	.
chr10	19988153	19988154	chr10:19988154:C:T	rs4311960	C	T	T	SOX2_HMG_3	-16	0	+	0	0	.
chr10	20142602	20142603	chr10:20142603:A:G	rs2461921	A	G	A	SOX2_HMG_3	33	0	-	0	0	.
chr10	20175974	20175975	chr10:20175975:G:A	rs11593311	G	A	G	SOX2_HMG_3	-11	0	-	0	0	.
chr10	20193300	20193301	chr10:20193301:G:C	rs11011853	G	C	G	SOX2_HMG_3	13	1	+	4.423146058807757	-2.485608720507463	TAACAAATGTATTGATT
chr10	20494783	20494784	chr10:20494784:G:A	rs10828064	G	A	A	SOX2_HMG_3	28	0	-	0	0	.
chr10	20524005	20524006	chr10:20524006:C:G	rs7912427	C	G	C	SOX2_HMG_3	-10	0	-	0	0	.
chr10	20891066	20891067	chr10:20891067:T:C	rs3791204	T	C	T	SOX2_HMG_3	11	1	+	5.729063181991268	-0.9636283162410784	TGTGAATAATATTGATG
chr10	20918447	20918448	chr10:20918448:G:A	rs11012391	G	A	A	SOX2_HMG_3	8	1	+	5.62141367515591	4.772369727792281	CATCAGTAGTAGTGAAA
chr10	21049665	21049666	chr10:21049666:A:C	rs643674	A	C	C	SOX2_HMG_3	24	0	-	0	0	.
chr10	21340744	21340745	chr10:21340745:G:T	rs12252792	G	T	G	SOX2_HMG_3	-8	0	+	0	0	.
chr10	21481317	21481318	chr10:21481318:C:T	rs140747191	C	T	c	SOX2_HMG_3	-19	0	+	0	0	.
chr10	22158640	22158641	chr10:22158641:G:A	rs11593347	G	A	g	SOX2_HMG_3	1	1	-	2.257926407485632	2.257926407485632	GCACAAGGTCAGTGATT
chr10	22455079	22455080	chr10:22455080:T:C	rs1418378	T	C	T	SOX2_HMG_3	7	1	+	3.3676411586372166	-1.320490548065221	TAGCTATTGAATTGATG
chr10	22483353	22483354	chr10:22483354:C:G	rs61377954	C	G	C	SOX2_HMG_3	20	0	+	0	0	.
chr10	23291931	23291932	chr10:23291932:A:T	rs146019954	A	T	A	SOX2_HMG_3	-4	0	+	0	0	.
chr10	23445808	23445809	chr10:23445809:A:G	rs7920535	A	G	G	SOX2_HMG_3	1	1	+	9.77821647776152	7.946568887682229	GATCAATGACAATGATT
chr10	23482297	23482298	chr10:23482298:A:G	rs72771426	A	G	A	SOX2_HMG_3	5	1	+	5.478640985742324	-1.430113793572899	CATCAATGGTGGTGTGG
chr10	23608711	23608712	chr10:23608712:T:C	rs78095884	T	C	T	SOX2_HMG_3	-16	0	+	0	0	.
chr10	24463714	24463715	chr10:24463715:A:G	rs16924790	A	G	A	SOX2_HMG_3	6	1	-	4.712048238642329	-2.1967065406728903	GGCCAATAGTATTGTGA
chr10	24644059	24644060	chr10:24644060:T:C	rs773407288	T	C	T	SOX2_HMG_3	18	0	-	0	0	.
chr10	24951652	24951653	chr10:24951653:A:G	rs890942217	A	G	A	SOX2_HMG_3	6	1	-	5.70984360065933	-1.19891117865589	ACTCAATGGTGGTGAGG
chr10	25707218	25707219	chr10:25707219:G:A	rs77936140	G	A	G	SOX2_HMG_3	3	1	-	6.233980595290491	-0.6747741840247294	TTTCAATGCCAGTGGGG
chr10	25865535	25865536	chr10:25865536:G:T	rs10508706	G	T	G	SOX2_HMG_3	7	1	+	4.659931648969302	2.6152211442357656	GACCAAGGATATTGAAA
chr10	25867401	25867402	chr10:25867402:A:G	rs17738073	A	G	A	SOX2_HMG_3	35	0	+	0	0	.
chr10	26136471	26136472	chr10:26136472:C:T	rs79664328	C	T	C	SOX2_HMG_3	32	0	-	0	0	.
chr10	26309953	26309954	chr10:26309954:G:A	rs60698538	G	A	G	SOX2_HMG_3	7	1	+	3.5204665281126655	0.7916794075513307	AATAAATGTTATTCAAA
chr10	26372582	26372583	chr10:26372583:A:G	rs2105059	A	G	A	SOX2_HMG_3	-14	0	-	0	0	.
chr10	26445892	26445893	chr10:26445893:G:C	rs10764616	G	C	C	SOX2_HMG_3	-8	0	-	0	0	.
chr10	26684836	26684837	chr10:26684837:A:G	rs146111209	A	G	A	SOX2_HMG_3	-18	0	+	0	0	.
chr10	26708113	26708114	chr10:26708114:T:C	rs11015239	T	C	T	SOX2_HMG_3	33	0	+	0	0	.
chr10	26866997	26866998	chr10:26866998:G:C	rs2104456	G	C	C	SOX2_HMG_3	26	0	-	0	0	.
chr10	27611685	27611686	chr10:27611686:G:A	rs10741138	G	A	A	SOX2_HMG_3	-7	0	-	0	0	.
chr10	27959594	27959595	chr10:27959595:G:A	rs75593214	G	A	G	SOX2_HMG_3	-18	0	+	0	0	.
chr10	27997737	27997738	chr10:27997738:A:G	rs9299595	A	G	A	SOX2_HMG_3	34	0	+	0	0	.
chr10	28308378	28308379	chr10:28308379:A:C	rs11007003	A	C	A	SOX2_HMG_3	24	0	-	0	0	.
chr10	28320531	28320532	chr10:28320532:G:A	rs786393	G	A	G	SOX2_HMG_3	18	0	+	0	0	.
chr10	28334552	28334553	chr10:28334553:G:T	rs191523151	G	T	G	SOX2_HMG_3	35	0	+	0	0	.
chr10	28432171	28432172	chr10:28432172:A:G	rs11007105	A	G	A	SOX2_HMG_3	5	1	+	4.874456726042149	-2.0342980532730683	AGTCTATTCCATTGAAA
chr10	28630898	28630899	chr10:28630899:C:T	rs332190	C	T	T	SOX2_HMG_3	0	1	-	0.8064891981563304	0.5858949190710366	GGTCCATGGCATGGAGG
chr10	28735197	28735198	chr10:28735198:G:C	rs1014606	G	C	C	SOX2_HMG_3	20	0	-	0	0	.
chr10	28735200	28735201	chr10:28735201:G:A	rs1014607	G	A	G	SOX2_HMG_3	17	0	-	0	0	.
chr10	28872183	28872184	chr10:28872184:G:A	rs1632622	G	A	a	SOX2_HMG_3	35	0	-	0	0	.
chr10	28872206	28872207	chr10:28872207:A:T	rs1632569	A	T	a	SOX2_HMG_3	12	1	-	2.4895049736674375	-4.419249805647784	CATCAATTCCACTGGAG
chr10	28974968	28974969	chr10:28974969:G:C	rs11594011	G	C	G	SOX2_HMG_3	13	1	+	3.1959099786390195	-3.7128448006762	TGGCAATGGGATTGTTG
chr10	28995039	28995040	chr10:28995040:A:G	rs76921075	A	G	A	SOX2_HMG_3	-17	0	+	0	0	.
chr10	29158933	29158934	chr10:29158934:T:A	rs55953667	T	A	T	SOX2_HMG_3	19	0	+	0	0	.
chr10	29240208	29240209	chr10:29240209:A:G	rs10826582	A	G	A	SOX2_HMG_3	-13	0	+	0	0	.
chr10	29515986	29515987	chr10:29515987:C:T	rs11007637	C	T	C	SOX2_HMG_3	21	0	-	0	0	.
chr10	29667291	29667292	chr10:29667292:A:G	rs35654230	A	G	G	SOX2_HMG_3	-3	0	-	0	0	.
chr10	29860723	29860724	chr10:29860724:A:G	rs16930687	A	G	A	SOX2_HMG_3	15	1	+	3.351344502364559	2.9188709208136583	AAGGAATGACAGTGAAA
chr10	29964320	29964321	chr10:29964321:A:T	rs35495115	A	T	A	SOX2_HMG_3	-14	0	+	0	0	.
chr10	30052188	30052189	chr10:30052189:C:T	rs149971906	C	T	C	SOX2_HMG_3	-20	0	-	0	0	.
chr10	30089933	30089934	chr10:30089934:A:G	rs7078436	A	G	G	SOX2_HMG_3	6	1	-	5.337204853002741	-1.57154992631248	CACCAATGTAATTGGGA
chr10	30166903	30166904	chr10:30166904:A:G	rs2689207	A	G	G	SOX2_HMG_3	0	1	-	2.3712117187335737	2.508540696782238	TATAAATGGAGTTGATG
chr10	30241204	30241205	chr10:30241205:A:T	rs2948891	A	T	A	SOX2_HMG_3	-13	0	-	0	0	.
chr10	30253135	30253136	chr10:30253136:G:A	rs1758935	G	A	A	SOX2_HMG_3	-7	0	+	0	0	.
chr10	30383264	30383265	chr10:30383265:T:A	rs2480284	T	A	.	SOX2_HMG_3	20	0	+	0	0	.
chr10	30414583	30414584	chr10:30414584:A:C	rs2480277	A	C	.	SOX2_HMG_3	2	1	-	2.051855851684928	-1.8157589829931122	CATATATGGCATTGAAA
chr10	30442481	30442482	chr10:30442482:A:G	rs7071698	A	G	G	SOX2_HMG_3	-15	0	-	0	0	.
chr10	30542524	30542525	chr10:30542525:G:A	rs906231	G	A	g	SOX2_HMG_3	21	0	-	0	0	.
chr10	30558077	30558078	chr10:30558078:T:C	rs4749568	T	C	C	SOX2_HMG_3	-13	0	+	0	0	.
chr10	30558094	30558095	chr10:30558095:A:C	rs145311269	A	C	A	SOX2_HMG_3	4	1	+	7.525367923518539	0.6166131442033196	CTGCAATGTCATTGACA
chr10	30999079	30999080	chr10:30999080:C:G	rs546989348	C	G	C	SOX2_HMG_3	-8	0	-	0	0	.
chr10	31105963	31105964	chr10:31105964:C:A	rs58580703	C	A	C	SOX2_HMG_3	22	0	-	0	0	.
chr10	31624062	31624063	chr10:31624063:T:C	rs1772799	T	C	C	SOX2_HMG_3	25	0	-	0	0	.
chr10	31624099	31624100	chr10:31624100:T:G	rs12256856	T	G	T	SOX2_HMG_3	-12	0	-	0	0	.
chr10	31646710	31646711	chr10:31646711:A:G	rs112196588	A	G	A	SOX2_HMG_3	5	1	+	3.6770105605754764	-3.2317442187397476	AGTCAATGCCATTATAT
chr10	31679204	31679205	chr10:31679205:A:G	rs796129	A	G	G	SOX2_HMG_3	20	0	-	0	0	.
chr10	31691743	31691744	chr10:31691744:T:A	rs1087933	T	A	A	SOX2_HMG_3	23	0	-	0	0	.
chr10	31774457	31774458	chr10:31774458:C:T	rs1042182892	C	T	C	SOX2_HMG_3	24	0	+	0	0	.
chr10	31774461	31774462	chr10:31774462:T:C	rs7901745	T	C	t	SOX2_HMG_3	28	0	+	0	0	.
chr10	32963165	32963166	chr10:32963166:T:G	rs77677848	T	G	T	SOX2_HMG_3	21	0	-	0	0	.
chr10	33010861	33010862	chr10:33010862:C:T	rs116057332	C	T	C	SOX2_HMG_3	8	1	+	3.6054091600043434	4.477145512640206	ATGCAATGCTACTGATT
chr10	33117558	33117559	chr10:33117559:C:T	rs149424212	C	T	C	SOX2_HMG_3	-9	0	+	0	0	.
chr10	33233924	33233925	chr10:33233925:T:C	rs75318989	T	C	T	SOX2_HMG_3	6	1	+	6.593926103741973	-0.31482867557324945	CATCAATGCTATTCTAG
chr10	33235399	33235400	chr10:33235400:G:A	rs112982326	G	A	G	SOX2_HMG_3	3	1	-	9.999218097219691	3.0904633179044745	GAGCAATGGTAGTGACT
chr10	33254937	33254938	chr10:33254938:G:A	rs1537174	G	A	g	SOX2_HMG_3	-6	0	+	0	0	.
chr10	33254940	33254941	chr10:33254941:G:A	rs1319014	G	A	G	SOX2_HMG_3	-3	0	+	0	0	.
chr10	33304893	33304894	chr10:33304894:A:G	rs11597915	A	G	A	SOX2_HMG_3	0	1	+	4.768424471584508	4.989018750669802	AAGCAATGACATTCAAA
chr10	33509817	33509818	chr10:33509818:A:C	rs2605506	A	C	A	SOX2_HMG_3	-16	0	-	0	0	.
chr10	33509820	33509821	chr10:33509821:T:G	chr10:33509821:T:G	T	G	T	SOX2_HMG_3	-19	0	-	0	0	.
chr10	33661595	33661596	chr10:33661596:G:A	rs117937609	G	A	G	SOX2_HMG_3	-10	0	+	0	0	.
chr10	33735861	33735862	chr10:33735862:T:A	rs73267245	T	A	T	SOX2_HMG_3	4	1	-	3.53671978406976	-3.3720349952454596	AAACACTGTTAGTGACA
chr10	33794722	33794723	chr10:33794723:G:A	rs2777518	G	A	g	SOX2_HMG_3	20	0	-	0	0	.
chr10	33804797	33804798	chr10:33804798:G:A	rs78509871	G	A	G	SOX2_HMG_3	1	1	+	4.6314897233232095	6.463137313402502	CGTTAATAATATTGAAG
chr10	33871312	33871313	chr10:33871313:C:T	rs16934885	C	T	T	SOX2_HMG_3	-12	0	-	0	0	.
chr10	33925157	33925158	chr10:33925158:T:C	rs1154683	T	C	T	SOX2_HMG_3	-9	0	-	0	0	.
chr10	34003793	34003794	chr10:34003794:T:G	rs224703	T	G	G	SOX2_HMG_3	25	0	+	0	0	.
chr10	34045830	34045831	chr10:34045831:G:A	rs151296196	G	A	G	SOX2_HMG_3	0	1	+	9.50451775412426	9.283923475038966	GATCAGTGATATTGAGG
chr10	34531111	34531112	chr10:34531112:G:T	rs114114739	G	T	G	SOX2_HMG_3	35	0	-	0	0	.
chr10	34733289	34733290	chr10:34733290:T:C	rs149691167	T	C	T	SOX2_HMG_3	5	1	+	4.419968191521852	4.419968191521852	TATCATTGACAGTGACT
chr10	34808469	34808470	chr10:34808470:T:C	rs4934665	T	C	T	SOX2_HMG_3	31	0	-	0	0	.
chr10	34968957	34968958	chr10:34968958:G:A	rs4007288	G	A	.	SOX2_HMG_3	-7	0	-	0	0	.
chr10	35070546	35070547	chr10:35070547:A:G	rs12240347	A	G	G	SOX2_HMG_3	20	0	+	0	0	.
chr10	35126828	35126829	chr10:35126829:C:G	rs779460175	C	G	C	SOX2_HMG_3	-7	0	+	0	0	.
chr10	35126854	35126855	chr10:35126855:T:C	rs568310769	T	C	T	SOX2_HMG_3	19	0	+	0	0	.
chr10	35128273	35128274	chr10:35128274:C:A	rs7902166	C	A	C	SOX2_HMG_3	33	0	-	0	0	.
chr10	35149460	35149461	chr10:35149461:T:C	rs931694831	T	C	T	SOX2_HMG_3	11	1	+	3.8951208138038798	-2.797570684428467	TCTAAATAGTATTGAAA
chr10	35185755	35185756	chr10:35185756:G:T	chr10:35185756:G:T	G	T	G	SOX2_HMG_3	25	0	-	0	0	.
chr10	35185770	35185771	chr10:35185771:T:C	rs4934540	T	C	C	SOX2_HMG_3	10	1	-	3.268219050223419	-3.6405357290918006	TGTCAATAGAACTGAGG
chr10	35252632	35252633	chr10:35252633:T:A	rs11010146	T	A	T	SOX2_HMG_3	-12	0	-	0	0	.
chr10	35253681	35253682	chr10:35253682:G:T	rs12240638	G	T	G	SOX2_HMG_3	-5	0	-	0	0	.
chr10	35253828	35253829	chr10:35253829:T:C	rs12249814	T	C	T	SOX2_HMG_3	23	0	+	0	0	.
chr10	35267609	35267610	chr10:35267610:T:C	rs142460001	T	C	T	SOX2_HMG_3	11	1	+	4.590235467874564	-2.1024560303577835	TGACAATGATATAGATG
chr10	35410795	35410796	chr10:35410796:A:T	rs4934751	A	T	A	SOX2_HMG_3	15	1	+	5.189888549953963	6.424790986670686	CATCAGTGTCATTGGAG
chr10	35684379	35684380	chr10:35684380:C:T	rs661752	C	T	C	SOX2_HMG_3	-19	0	-	0	0	.
chr10	35938172	35938173	chr10:35938173:T:C	rs2696309	T	C	T	SOX2_HMG_3	-18	0	-	0	0	.
chr10	35994144	35994145	chr10:35994145:C:T	rs16936504	C	T	C	SOX2_HMG_3	18	0	-	0	0	.
chr10	35994162	35994163	chr10:35994163:T:C	rs1832974	T	C	T	SOX2_HMG_3	0	1	-	3.1921731182640856	3.4127673973493793	ATTCAAAGTCAGTGTTT
chr10	36021821	36021822	chr10:36021822:G:T	rs10508824	G	T	T	SOX2_HMG_3	27	0	+	0	0	.
chr10	36441450	36441451	chr10:36441451:C:A	rs74134822	C	A	C	SOX2_HMG_3	-13	0	-	0	0	.
chr10	36606355	36606356	chr10:36606356:C:T	rs10827651	C	T	C	SOX2_HMG_3	8	1	-	5.241317544670862	4.392273597307232	GGACAGTGGCATTGATA
chr10	36628211	36628212	chr10:36628212:A:C	rs10827670	A	C	C	SOX2_HMG_3	27	0	-	0	0	.
chr10	36771839	36771840	chr10:36771840:C:T	rs11010852	C	T	T	SOX2_HMG_3	3	1	+	3.6119766119997094	-3.29677816731551	AATCAATGTTGGTCATG
chr10	37566620	37566621	chr10:37566621:C:G	rs545748736	C	G	c	SOX2_HMG_3	-7	0	-	0	0	.
chr10	37619135	37619136	chr10:37619136:A:G	rs7086522	A	G	a	SOX2_HMG_3	24	0	+	0	0	.
chr10	37702139	37702140	chr10:37702140:C:T	rs67598405	C	T	.	SOX2_HMG_3	9	1	+	4.797771905091942	5.604442039028988	AATCAACTCCAGTGATC
chr10	37702152	37702153	chr10:37702153:C:T	rs4934899	C	T	.	SOX2_HMG_3	22	0	+	0	0	.
chr10	38527724	38527725	chr10:38527725:A:G	rs149329934	A	G	.	SOX2_HMG_3	24	0	+	0	0	.
chr10	38527731	38527732	chr10:38527732:T:A	rs922968455	T	A	.	SOX2_HMG_3	31	0	+	0	0	.
chr10	38528338	38528339	chr10:38528339:C:G	rs11011630	C	G	.	SOX2_HMG_3	3	1	+	5.66928299220961	-1.2394717871056111	TTGCAATGGAATTGACT
chr10	38528361	38528362	chr10:38528362:T:A	rs1294549316	T	A	.	SOX2_HMG_3	26	0	+	0	0	.
chr10	41844532	41844533	chr10:41844533:T:C	rs61846559	T	C	.	SOX2_HMG_3	-20	0	-	0	0	.
chr10	41845975	41845976	chr10:41845976:C:T	rs766536860	C	T	.	SOX2_HMG_3	-5	0	-	0	0	.
chr10	41859978	41859979	chr10:41859979:T:C	rs200129664	T	C	.	SOX2_HMG_3	-19	0	+	0	0	.
chr10	41878667	41878668	chr10:41878668:G:A	rs62641334	G	A	.	SOX2_HMG_3	21	0	+	0	0	.
chr10	41914673	41914674	chr10:41914674:A:C	rs1324953000	A	C	.	SOX2_HMG_3	20	0	+	0	0	.
chr10	42428606	42428607	chr10:42428607:T:C	rs2419674	T	C	.	SOX2_HMG_3	-6	0	-	0	0	.
chr10	42976588	42976589	chr10:42976589:A:C	rs61845273	A	C	A	SOX2_HMG_3	31	0	+	0	0	.
chr10	43285533	43285534	chr10:43285534:C:T	rs11238502	C	T	C	SOX2_HMG_3	27	0	+	0	0	.
chr10	43793805	43793806	chr10:43793806:G:T	rs1028519083	G	T	.	SOX2_HMG_3	34	0	-	0	0	.
chr10	43793853	43793854	chr10:43793854:A:G	rs10899910	A	G	.	SOX2_HMG_3	-14	0	-	0	0	.
chr10	43793857	43793858	chr10:43793858:G:A	rs57113623	G	A	.	SOX2_HMG_3	-18	0	-	0	0	.
chr10	43888896	43888897	chr10:43888897:A:T	rs79128199	A	T	A	SOX2_HMG_3	27	0	-	0	0	.
chr10	44031860	44031861	chr10:44031861:A:C	rs72782973	A	C	A	SOX2_HMG_3	-9	0	-	0	0	.
chr10	44143643	44143644	chr10:44143644:T:C	rs766927	T	C	C	SOX2_HMG_3	-5	0	+	0	0	.
chr10	44180843	44180844	chr10:44180844:G:A	rs74138238	G	A	A	SOX2_HMG_3	18	0	-	0	0	.
chr10	44355927	44355928	chr10:44355928:A:G	rs920174	A	G	A	SOX2_HMG_3	11	1	-	5.354782388254025	-1.3379091099783231	CATCAAAGCCATTGTGG
chr10	44371697	44371698	chr10:44371698:A:G	rs1029153	A	G	G	SOX2_HMG_3	15	1	-	5.657861429273812	2.815152273096954	AGTAAATTATAGTGATG
chr10	44506921	44506922	chr10:44506922:A:G	rs11598086	A	G	a	SOX2_HMG_3	6	1	-	4.393373032655116	-2.5153817466601054	AATCAATGGCAGAGTGT
chr10	44507590	44507591	chr10:44507591:A:G	rs148185869	A	G	A	SOX2_HMG_3	31	0	+	0	0	.
chr10	44715241	44715242	chr10:44715242:T:G	rs7097094	T	G	G	SOX2_HMG_3	-19	0	-	0	0	.
chr10	44878773	44878774	chr10:44878774:C:A	rs117711205	C	A	C	SOX2_HMG_3	-6	0	+	0	0	.
chr10	45471149	45471150	chr10:45471150:T:C	rs76491632	T	C	T	SOX2_HMG_3	27	0	-	0	0	.
chr10	45471179	45471180	chr10:45471180:G:A	rs901684	G	A	A	SOX2_HMG_3	-3	0	-	0	0	.
chr10	46235971	46235972	chr10:46235972:A:G	rs7091685	A	G	.	SOX2_HMG_3	25	0	+	0	0	.
chr10	46257669	46257670	chr10:46257670:C:T	rs191073147	C	T	.	SOX2_HMG_3	23	0	+	0	0	.
chr10	46285999	46286000	chr10:46286000:T:C	rs79031606	T	C	.	SOX2_HMG_3	-18	0	-	0	0	.
chr10	46327884	46327885	chr10:46327885:G:A	rs74129864	G	A	.	SOX2_HMG_3	8	1	-	4.1395743569757295	5.0113107096115925	CATCAATGCTTGTGGTT
chr10	46530174	46530175	chr10:46530175:A:G	rs28444926	A	G	A	SOX2_HMG_3	-2	0	-	0	0	.
chr10	46596194	46596195	chr10:46596195:G:A	rs28470456	G	A	G	SOX2_HMG_3	12	1	-	4.934209831161478	11.842964610476699	CAACAATGGCATCGAGG
chr10	46878340	46878341	chr10:46878341:G:T	rs577730774	G	T	G	SOX2_HMG_3	8	1	+	6.024476391861331	6.1619443117259936	GGTCACTGGCAGTGAGA
chr10	47045267	47045268	chr10:47045268:A:C	rs528869080	A	C	C	SOX2_HMG_3	28	0	-	0	0	.
chr10	47045278	47045279	chr10:47045279:G:A	rs145175052	G	A	G	SOX2_HMG_3	17	0	-	0	0	.
chr10	47177796	47177797	chr10:47177797:A:G	rs79639638	A	G	A	SOX2_HMG_3	4	1	+	4.146723848080778	-2.7620309312344435	TTTCATTTGTATTGAGA
chr10	47223806	47223807	chr10:47223807:T:C	rs12572948	T	C	T	SOX2_HMG_3	26	0	+	0	0	.
chr10	47268001	47268002	chr10:47268002:G:A	rs11204227	G	A	G	SOX2_HMG_3	25	0	+	0	0	.
chr10	47383290	47383291	chr10:47383291:G:T	rs1993493	G	T	G	SOX2_HMG_3	7	1	+	3.1709262942388925	1.1262157895053568	CATCAGTGGCATTGGCA
chr10	47997136	47997137	chr10:47997137:T:C	rs150648084	T	C	c	SOX2_HMG_3	23	0	+	0	0	.
chr10	47997138	47997139	chr10:47997139:C:T	rs3125114	C	T	t	SOX2_HMG_3	25	0	+	0	0	.
chr10	48383674	48383675	chr10:48383675:C:T	rs2698761	C	T	C	SOX2_HMG_3	3	1	-	4.300981808500824	4.300981808500824	AATGAATGGCACTGATG
chr10	48406347	48406348	chr10:48406348:G:A	rs3827680	G	A	A	SOX2_HMG_3	-3	0	+	0	0	.
chr10	48477399	48477400	chr10:48477400:T:C	rs78395468	T	C	C	SOX2_HMG_3	0	1	+	6.381057490447693	6.518386468496358	TATCCATTGTATTGTTG
chr10	48479240	48479241	chr10:48479241:C:T	rs3888909	C	T	C	SOX2_HMG_3	-18	0	+	0	0	.
chr10	48511025	48511026	chr10:48511026:T:C	rs10857586	T	C	T	SOX2_HMG_3	15	1	-	3.9516586522977657	3.5191850707468646	GGTCTATTCCAGTGAAG
chr10	48517260	48517261	chr10:48517261:C:T	rs1816888	C	T	C	SOX2_HMG_3	-19	0	-	0	0	.
chr10	48545830	48545831	chr10:48545831:G:A	rs565417029	G	A	G	SOX2_HMG_3	-12	0	-	0	0	.
chr10	48547769	48547770	chr10:48547770:C:T	rs1814469	C	T	C	SOX2_HMG_3	-11	0	+	0	0	.
chr10	48616833	48616834	chr10:48616834:G:A	rs61838392	G	A	G	SOX2_HMG_3	13	1	+	3.3810814964478544	-3.5276732828673656	GATCTATTAAAGTGAGT
chr10	48748489	48748490	chr10:48748490:T:C	rs67702314	T	C	T	SOX2_HMG_3	-12	0	+	0	0	.
chr10	48891479	48891480	chr10:48891480:T:A	rs535133639	T	A	T	SOX2_HMG_3	-9	0	+	0	0	.
chr10	48907345	48907346	chr10:48907346:C:T	rs12263240	C	T	C	SOX2_HMG_3	-13	0	-	0	0	.
chr10	48935540	48935541	chr10:48935541:A:G	rs150168946	A	G	A	SOX2_HMG_3	6	1	-	2.3979451692410443	-4.510809610074176	CATGAATGCTATTAAAG
chr10	48935545	48935546	chr10:48935546:T:C	rs10776658	T	C	T	SOX2_HMG_3	1	1	-	2.3979451692410443	0.566297579161753	CATGAATGCTATTAAAG
chr10	48948417	48948418	chr10:48948418:C:T	rs2137921	C	T	C	SOX2_HMG_3	22	0	+	0	0	.
chr10	49088935	49088936	chr10:49088936:C:T	rs12762834	C	T	C	SOX2_HMG_3	19	0	+	0	0	.
chr10	49141333	49141334	chr10:49141334:A:G	rs11814668	A	G	A	SOX2_HMG_3	3	1	+	4.048748644571605	4.048748644571605	CACAAATGGCAGTGATG
chr10	49323820	49323821	chr10:49323821:G:C	rs200715939	G	C	G	SOX2_HMG_3	9	1	-	3.1379885885873553	-2.494691648575697	GGTCAAGAGCATTGTTT
chr10	49353405	49353406	chr10:49353406:T:A	rs4838507	T	A	T	SOX2_HMG_3	-6	0	+	0	0	.
chr10	50169625	50169626	chr10:50169626:T:A	rs375802141	T	A	T	SOX2_HMG_3	6	1	+	6.548719543438807	-0.36003523587641495	CTTAAATGTAATTGATG
chr10	50295395	50295396	chr10:50295396:A:G	rs10825602	A	G	A	SOX2_HMG_3	9	1	-	3.424806660356879	2.6181365264198333	TATCTATAGTATTGGTT
chr10	50401012	50401013	chr10:50401013:A:T	rs7082757	A	T	T	SOX2_HMG_3	29	0	+	0	0	.
chr10	50487770	50487771	chr10:50487771:T:C	rs1011881	T	C	t	SOX2_HMG_3	-19	0	-	0	0	.
chr10	50604995	50604996	chr10:50604996:G:A	rs4935736	G	A	A	SOX2_HMG_3	-15	0	-	0	0	.
chr10	51043832	51043833	chr10:51043833:G:A	rs11814118	G	A	G	SOX2_HMG_3	14	1	+	5.983315165497028	10.165192782798146	AGACAATGGCATTGGAT
chr10	51919299	51919300	chr10:51919300:C:T	rs1937683	C	T	T	SOX2_HMG_3	24	0	+	0	0	.
chr10	51964863	51964864	chr10:51964864:A:G	rs7085893	A	G	A	SOX2_HMG_3	11	1	-	3.305684739907639	-3.387006758324708	ATTGAATGCCATTGTAG
chr10	52100727	52100728	chr10:52100728:T:C	rs4935029	T	C	T	SOX2_HMG_3	-12	0	+	0	0	.
chr10	52207041	52207042	chr10:52207042:C:A	rs7898960	C	A	C	SOX2_HMG_3	3	1	+	3.4582130188571214	-3.4505417604581	TTGCAATGGCATTCATG
chr10	52309425	52309426	chr10:52309426:C:T	rs1896367	C	T	C	SOX2_HMG_3	21	0	-	0	0	.
chr10	52313140	52313141	chr10:52313141:C:T	rs11001553	C	T	T	SOX2_HMG_3	20	0	-	0	0	.
chr10	52649727	52649728	chr10:52649728:T:C	rs10159668	T	C	T	SOX2_HMG_3	21	0	+	0	0	.
chr10	52818185	52818186	chr10:52818186:A:T	rs116336031	A	T	A	SOX2_HMG_3	20	0	+	0	0	.
chr10	52818197	52818198	chr10:52818198:C:G	chr10:52818198:C:G	C	G	C	SOX2_HMG_3	32	0	+	0	0	.
chr10	52911893	52911894	chr10:52911894:G:A	rs7093457	G	A	A	SOX2_HMG_3	5	1	+	6.3289022726789765	13.2376570519942	TTTCAGTGTTATTGAGA
chr10	53689425	53689426	chr10:53689426:G:A	rs7916023	G	A	A	SOX2_HMG_3	8	1	-	2.719884279651577	3.59162063228744	ACTCAGTGCCAGTGACA
chr10	53689453	53689454	chr10:53689454:T:C	rs1489824	T	C	T	SOX2_HMG_3	-20	0	-	0	0	.
chr10	53843982	53843983	chr10:53843983:T:C	rs745328967	T	C	T	SOX2_HMG_3	32	0	-	0	0	.
chr10	53965576	53965577	chr10:53965577:G:A	rs2593135	G	A	A	SOX2_HMG_3	-7	0	-	0	0	.
chr10	54009576	54009577	chr10:54009577:G:A	rs2610875	G	A	G	SOX2_HMG_3	31	0	+	0	0	.
chr10	54304187	54304188	chr10:54304188:C:T	rs7919725	C	T	T	SOX2_HMG_3	12	1	-	2.901807041327429	2.901807041327429	AAACAATGATATGGGTG
chr10	54419078	54419079	chr10:54419079:C:T	rs1758816	C	T	T	SOX2_HMG_3	11	1	+	4.810034899089557	11.502726397321906	GGTCAATACAACTGATA
chr10	54469707	54469708	chr10:54469708:G:A	rs112241198	G	A	G	SOX2_HMG_3	-5	0	+	0	0	.
chr10	54716346	54716347	chr10:54716347:A:C	rs67442181	A	C	C	SOX2_HMG_3	-14	0	+	0	0	.
chr10	54986173	54986174	chr10:54986174:A:G	rs2178644	A	G	G	SOX2_HMG_3	-5	0	+	0	0	.
chr10	54986213	54986214	chr10:54986214:C:T	rs2178643	C	T	T	SOX2_HMG_3	35	0	+	0	0	.
chr10	55509217	55509218	chr10:55509218:G:A	rs11004896	G	A	A	SOX2_HMG_3	-14	0	-	0	0	.
chr10	55667454	55667455	chr10:55667455:G:A	rs1574191	G	A	T	SOX2_HMG_3	18	0	-	0	0	.
chr10	55822837	55822838	chr10:55822838:G:A	rs10825629	G	A	a	SOX2_HMG_3	13	1	+	3.9032104170061914	-3.00554436230903	AATCAATTTCTTTGTGT
chr10	56700845	56700846	chr10:56700846:G:T	rs75171796	G	T	G	SOX2_HMG_3	-6	0	+	0	0	.
chr10	57053609	57053610	chr10:57053610:G:A	rs73277673	G	A	G	SOX2_HMG_3	13	1	+	3.6063404658459084	-3.302414313469312	GTGCCATGCCATTGATG
chr10	57138483	57138484	chr10:57138484:T:C	rs11498138	T	C	T	SOX2_HMG_3	1	1	+	2.1235514995636917	2.1235514995636917	ATCCAATGGTGTTGAGG
chr10	57454111	57454112	chr10:57454112:G:A	rs115590581	G	A	a	SOX2_HMG_3	24	0	-	0	0	.
chr10	57543546	57543547	chr10:57543547:C:T	rs11005855	C	T	C	SOX2_HMG_3	-13	0	+	0	0	.
chr10	57785490	57785491	chr10:57785491:T:C	rs6481339	T	C	C	SOX2_HMG_3	20	0	-	0	0	.
chr10	57785492	57785493	chr10:57785493:T:C	rs7077091	T	C	T	SOX2_HMG_3	18	0	-	0	0	.
chr10	57925275	57925276	chr10:57925276:G:C	rs7085744	G	C	C	SOX2_HMG_3	29	0	-	0	0	.
chr10	57925306	57925307	chr10:57925307:C:T	rs7086874	C	T	C	SOX2_HMG_3	-2	0	-	0	0	.
chr10	58027602	58027603	chr10:58027603:T:C	rs12357499	T	C	T	SOX2_HMG_3	12	1	+	3.4083655703207367	-3.500389208994483	GCTCATTTATATTGTTG
chr10	58105087	58105088	chr10:58105088:C:T	rs58670495	C	T	C	SOX2_HMG_3	-19	0	+	0	0	.
chr10	58438294	58438295	chr10:58438295:T:C	rs181001432	T	C	T	SOX2_HMG_3	12	1	+	2.074484982033531	-4.834269797281689	GTGCAAAGACAGTGATG
chr10	58613186	58613187	chr10:58613187:C:T	rs757848774	C	T	C	SOX2_HMG_3	28	0	+	0	0	.
chr10	58646027	58646028	chr10:58646028:C:A	rs6481417	C	A	A	SOX2_HMG_3	27	0	+	0	0	.
chr10	58932775	58932776	chr10:58932776:T:C	rs12220374	T	C	T	SOX2_HMG_3	-3	0	+	0	0	.
chr10	59133611	59133612	chr10:59133612:G:T	rs1975191	G	T	G	SOX2_HMG_3	36	0	-	0	0	.
chr10	59376456	59376457	chr10:59376457:T:G	rs384626	T	G	G	SOX2_HMG_3	20	0	+	0	0	.
chr10	59586618	59586619	chr10:59586619:A:G	rs7907910	A	G	A	SOX2_HMG_3	33	0	+	0	0	.
chr10	59589456	59589457	chr10:59589457:T:C	rs115225219	T	C	T	SOX2_HMG_3	5	1	-	9.580193029674078	2.671438250358858	AATCAATGGTAGTTATT
chr10	59594118	59594119	chr10:59594119:A:G	rs4948233	A	G	A	SOX2_HMG_3	-18	0	-	0	0	.
chr10	59606912	59606913	chr10:59606913:T:C	rs11006600	T	C	T	SOX2_HMG_3	36	0	+	0	0	.
chr10	59664355	59664356	chr10:59664356:G:A	rs77200219	G	A	A	SOX2_HMG_3	-9	0	+	0	0	.
chr10	59943765	59943766	chr10:59943766:C:A	rs373132870	C	A	C	SOX2_HMG_3	-14	0	-	0	0	.
chr10	60041643	60041644	chr10:60041644:G:T	rs2393582	G	T	T	SOX2_HMG_3	25	0	-	0	0	.
chr10	60042409	60042410	chr10:60042410:C:T	rs2393601	C	T	C	SOX2_HMG_3	36	0	-	0	0	.
chr10	60130456	60130457	chr10:60130457:G:A	rs113618506	G	A	G	SOX2_HMG_3	-13	0	+	0	0	.
chr10	60342557	60342558	chr10:60342558:A:G	rs1473404	A	G	G	SOX2_HMG_3	23	0	+	0	0	.
chr10	60368052	60368053	chr10:60368053:C:T	rs79359809	C	T	T	SOX2_HMG_3	23	0	+	0	0	.
chr10	60368064	60368065	chr10:60368065:A:G	rs79663415	A	G	A	SOX2_HMG_3	35	0	+	0	0	.
chr10	60434599	60434600	chr10:60434600:C:T	rs947959011	C	T	C	SOX2_HMG_3	18	0	+	0	0	.
chr10	60570748	60570749	chr10:60570749:A:G	rs74318560	A	G	A	SOX2_HMG_3	22	0	-	0	0	.
chr10	60875946	60875947	chr10:60875947:C:A	rs7083122	C	A	C	SOX2_HMG_3	32	0	+	0	0	.
chr10	60953989	60953990	chr10:60953990:T:C	rs12220887	T	C	T	SOX2_HMG_3	6	1	+	4.551617644929648	-2.3571371343855745	ATTCCATGTTATTGTGG
chr10	60955370	60955371	chr10:60955371:A:C	rs2116452	A	C	A	SOX2_HMG_3	19	0	-	0	0	.
chr10	60996633	60996634	chr10:60996634:G:C	rs2393709	G	C	C	SOX2_HMG_3	31	0	-	0	0	.
chr10	61163504	61163505	chr10:61163505:C:T	rs11818852	C	T	C	SOX2_HMG_3	28	0	-	0	0	.
chr10	61163544	61163545	chr10:61163545:T:C	rs116123721	T	C	T	SOX2_HMG_3	-12	0	-	0	0	.
chr10	61252548	61252549	chr10:61252549:G:T	rs117559418	G	T	G	SOX2_HMG_3	-13	0	+	0	0	.
chr10	61390282	61390283	chr10:61390283:C:G	rs4948451	C	G	C	SOX2_HMG_3	16	1	+	5.094150705826525	7.0939932007430695	CATCAAGGGTATTGGTC
chr10	61488036	61488037	chr10:61488037:A:T	rs2249816	A	T	T	SOX2_HMG_3	0	1	+	6.296861868599636	5.635060267924941	ATTCAATGGCAGTTATA
chr10	61593847	61593848	chr10:61593848:C:T	rs4948470	C	T	C	SOX2_HMG_3	3	1	+	6.350884391117445	-0.5578703881977762	TGTCAATGTATTTGAAG
chr10	61666315	61666316	chr10:61666316:T:C	rs10994865	T	C	T	SOX2_HMG_3	-6	0	+	0	0	.
chr10	61684669	61684670	chr10:61684670:G:A	rs72821788	G	A	G	SOX2_HMG_3	-11	0	-	0	0	.
chr10	61702871	61702872	chr10:61702872:T:C	rs7907498	T	C	T	SOX2_HMG_3	24	0	-	0	0	.
chr10	61793185	61793186	chr10:61793186:C:T	rs1002843976	C	T	C	SOX2_HMG_3	-8	0	+	0	0	.
chr10	61935288	61935289	chr10:61935289:C:G	rs6479779	C	G	C	SOX2_HMG_3	10	1	-	4.005104991607196	4.005104991607196	TTTCAATTTTGGTGATT
chr10	61935302	61935303	chr10:61935303:A:C	rs10994973	A	C	C	SOX2_HMG_3	-4	0	-	0	0	.
chr10	61940468	61940469	chr10:61940469:A:T	rs4360655	A	T	T	SOX2_HMG_3	29	0	-	0	0	.
chr10	61940485	61940486	chr10:61940486:A:G	rs4562771	A	G	G	SOX2_HMG_3	12	1	-	5.356573636821462	-1.552181142493758	TATAAATGATAGTGTTT
chr10	61993722	61993723	chr10:61993723:A:G	rs9415635	A	G	A	SOX2_HMG_3	17	0	-	0	0	.
chr10	61993736	61993737	chr10:61993737:G:A	rs80092100	G	A	G	SOX2_HMG_3	3	1	-	8.219377305739526	1.3106225264243043	TGACAATTATATTGAAG
chr10	61993752	61993753	chr10:61993753:A:T	rs370520548	A	T	A	SOX2_HMG_3	-13	0	-	0	0	.
chr10	62214469	62214470	chr10:62214470:T:G	rs10995090	T	G	T	SOX2_HMG_3	0	1	-	6.772309408811884	6.247836786185854	AATCAGTGGCATTGTAA
chr10	62225090	62225091	chr10:62225091:C:T	rs12360043	C	T	C	SOX2_HMG_3	33	0	-	0	0	.
chr10	62249305	62249306	chr10:62249306:G:A	rs111945636	G	A	G	SOX2_HMG_3	-7	0	-	0	0	.
chr10	62249316	62249317	chr10:62249317:G:A	rs10761616	G	A	G	SOX2_HMG_3	-18	0	-	0	0	.
chr10	62424763	62424764	chr10:62424764:C:A	rs3999111	C	A	C	SOX2_HMG_3	29	0	-	0	0	.
chr10	62443986	62443987	chr10:62443987:A:C	rs80060819	A	C	A	SOX2_HMG_3	21	0	-	0	0	.
chr10	62631614	62631615	chr10:62631615:G:A	rs10995245	G	A	G	SOX2_HMG_3	34	0	+	0	0	.
chr10	62728083	62728084	chr10:62728084:A:G	rs79979619	A	G	A	SOX2_HMG_3	15	1	-	4.315014263238332	1.4723051070614737	CATCAAATCTATTGGTG
chr10	62816431	62816432	chr10:62816432:A:G	rs1255176209	A	G	A	SOX2_HMG_3	-12	0	-	0	0	.
chr10	62892485	62892486	chr10:62892486:A:G	rs7914009	A	G	A	SOX2_HMG_3	30	0	+	0	0	.
chr10	62914069	62914070	chr10:62914070:C:T	rs4746725	C	T	t	SOX2_HMG_3	8	1	-	2.8254257047462077	1.976381757382579	AGACAATGGAAGTCATG
chr10	63682386	63682387	chr10:63682387:C:T	rs145734141	C	T	C	SOX2_HMG_3	10	1	+	2.8089061702235205	2.8089061702235205	AATGAATGTTCGTGATT
chr10	63704607	63704608	chr10:63704608:T:C	rs12569808	T	C	C	SOX2_HMG_3	15	1	+	2.210897123912077	-0.6318120322647813	AGTCAAGGATGTTGATG
chr10	63800202	63800203	chr10:63800203:T:G	rs1266702	T	G	G	SOX2_HMG_3	28	0	+	0	0	.
chr10	63907492	63907493	chr10:63907493:A:G	rs7086527	A	G	A	SOX2_HMG_3	24	0	-	0	0	.
chr10	63921219	63921220	chr10:63921220:C:T	rs2243532	C	T	C	SOX2_HMG_3	17	0	-	0	0	.
chr10	64476714	64476715	chr10:64476715:A:C	rs4300295	A	C	C	SOX2_HMG_3	31	0	+	0	0	.
chr10	65126117	65126118	chr10:65126118:G:A	rs4636540	G	A	G	SOX2_HMG_3	34	0	-	0	0	.
chr10	65159540	65159541	chr10:65159541:A:T	rs10996247	A	T	A	SOX2_HMG_3	6	1	-	16.322251022307526	9.413496242992306	CATCAATGTTATTGATC
chr10	65398552	65398553	chr10:65398553:G:A	rs10822528	G	A	A	SOX2_HMG_3	13	1	+	6.087787482738673	-0.8209672965765484	TTTCAATTGTCTTGATG
chr10	65474311	65474312	chr10:65474312:C:G	rs6480086	C	G	A	SOX2_HMG_3	-18	0	+	0	0	.
chr10	65762734	65762735	chr10:65762735:T:C	rs7084681	T	C	T	SOX2_HMG_3	10	1	-	11.912401278376045	5.003646499060826	AGGCAATGTTATTGAAG
chr10	65861546	65861547	chr10:65861547:G:T	rs35503142	G	T	G	SOX2_HMG_3	29	0	-	0	0	.
chr10	66501616	66501617	chr10:66501617:C:G	rs55856935	C	G	C	SOX2_HMG_3	-3	0	-	0	0	.
chr10	66623131	66623132	chr10:66623132:C:A	rs9664949	C	A	C	SOX2_HMG_3	29	0	-	0	0	.
chr10	66637440	66637441	chr10:66637441:G:A	rs12218587	G	A	G	SOX2_HMG_3	-10	0	-	0	0	.
chr10	67043633	67043634	chr10:67043634:T:A	rs547158879	T	A	T	SOX2_HMG_3	-7	0	-	0	0	.
chr10	67100801	67100802	chr10:67100802:A:G	rs2291106	A	G	A	SOX2_HMG_3	11	1	-	4.359917513768382	-2.332773984463965	GCTCAATTTCTTTGAGA
chr10	67669894	67669895	chr10:67669895:T:A	rs3125322	T	A	A	SOX2_HMG_3	30	0	+	0	0	.
chr10	67764719	67764720	chr10:67764720:G:C	rs16924807	G	C	C	SOX2_HMG_3	-1	0	+	0	0	.
chr10	68156564	68156565	chr10:68156565:G:A	rs71475229	G	A	G	SOX2_HMG_3	-7	0	-	0	0	.
chr10	68428611	68428612	chr10:68428612:T:G	rs75270147	T	G	T	SOX2_HMG_3	2	1	+	2.1242575528507732	-1.7433572818272667	CATCCATGCTATGGAAA
chr10	68722480	68722481	chr10:68722481:G:A	rs113255973	G	A	G	SOX2_HMG_3	27	0	+	0	0	.
chr10	68871392	68871393	chr10:68871393:G:A	rs370543393	G	A	G	SOX2_HMG_3	26	0	+	0	0	.
chr10	69044028	69044029	chr10:69044029:T:C	rs2429014	T	C	C	SOX2_HMG_3	-6	0	+	0	0	.
chr10	69110524	69110525	chr10:69110525:G:T	rs7915836	G	T	G	SOX2_HMG_3	29	0	-	0	0	.
chr10	69223402	69223403	chr10:69223403:A:G	rs4746823	A	G	A	SOX2_HMG_3	29	0	-	0	0	.
chr10	69329922	69329923	chr10:69329923:A:G	rs12355201	A	G	A	SOX2_HMG_3	4	1	+	2.8791189054872675	-4.029635873827953	GGTCATTAACAGTGAAA
chr10	69362956	69362957	chr10:69362957:A:T	rs10733851	A	T	T	SOX2_HMG_3	-10	0	-	0	0	.
chr10	69628733	69628734	chr10:69628734:A:C	rs2812576	A	C	C	SOX2_HMG_3	-15	0	+	0	0	.
chr10	69628754	69628755	chr10:69628755:C:T	rs2616095	C	T	C	SOX2_HMG_3	6	1	+	5.711386158982648	12.62014093829787	GATCAACGACATTGTGA
chr10	69767712	69767713	chr10:69767713:A:G	rs2255406	A	G	A	SOX2_HMG_3	-12	0	+	0	0	.
chr10	69838551	69838552	chr10:69838552:C:G	rs7913732	C	G	C	SOX2_HMG_3	32	0	+	0	0	.
chr10	69953008	69953009	chr10:69953009:T:C	rs74139248	T	C	C	SOX2_HMG_3	-11	0	-	0	0	.
chr10	70432430	70432431	chr10:70432431:A:G	rs144307002	A	G	A	SOX2_HMG_3	-10	0	+	0	0	.
chr10	70583632	70583633	chr10:70583633:C:G	rs117318775	C	G	C	SOX2_HMG_3	-12	0	-	0	0	.
chr10	70710419	70710420	chr10:70710420:C:T	rs12358019	C	T	C	SOX2_HMG_3	-11	0	-	0	0	.
chr10	70886208	70886209	chr10:70886209:G:A	rs57037268	G	A	G	SOX2_HMG_3	21	0	+	0	0	.
chr10	70952686	70952687	chr10:70952687:A:G	rs145105761	A	G	A	SOX2_HMG_3	22	0	+	0	0	.
chr10	70995770	70995771	chr10:70995771:A:C	rs10823658	A	C	C	SOX2_HMG_3	22	0	+	0	0	.
chr10	71074188	71074189	chr10:71074189:C:A	rs1213780315	C	A	C	SOX2_HMG_3	-3	0	+	0	0	.
chr10	71106087	71106088	chr10:71106088:A:G	rs10999680	A	G	A	SOX2_HMG_3	-17	0	+	0	0	.
chr10	71233322	71233323	chr10:71233323:C:T	rs12250459	C	T	C	SOX2_HMG_3	-17	0	+	0	0	.
chr10	71334439	71334440	chr10:71334440:G:A	rs12252139	G	A	G	SOX2_HMG_3	11	1	+	3.254538064747006	-2.0210734642653927	GATCTATTATAGTGGTA
chr10	71404237	71404238	chr10:71404238:C:T	rs10999803	C	T	C	SOX2_HMG_3	-19	0	-	0	0	.
chr10	71588200	71588201	chr10:71588201:A:G	rs138622309	A	G	A	SOX2_HMG_3	6	1	-	4.731745830050057	-2.177008949265163	TGTCAATGTTTTTGTTC
chr10	71667023	71667024	chr10:71667024:A:G	rs74357729	A	G	A	SOX2_HMG_3	31	0	+	0	0	.
chr10	71769121	71769122	chr10:71769122:A:C	rs10999991	A	C	A	SOX2_HMG_3	12	1	-	6.893794629518653	-0.01496014979656729	ATTCAATGTTATTTAAT
chr10	71769140	71769141	chr10:71769141:T:C	rs10999992	T	C	T	SOX2_HMG_3	-7	0	-	0	0	.
chr10	71771311	71771312	chr10:71771312:A:G	rs10762477	A	G	A	SOX2_HMG_3	19	0	-	0	0	.
chr10	71815787	71815788	chr10:71815788:G:A	rs1054635	G	A	G	SOX2_HMG_3	-11	0	+	0	0	.
chr10	71877562	71877563	chr10:71877563:G:C	rs10823861	G	C	G	SOX2_HMG_3	29	0	+	0	0	.
chr10	72275957	72275958	chr10:72275958:T:C	rs11192	T	C	T	SOX2_HMG_3	17	0	-	0	0	.
chr10	72328368	72328369	chr10:72328369:G:A	rs113672582	G	A	G	SOX2_HMG_3	-14	0	+	0	0	.
chr10	72502796	72502797	chr10:72502797:A:G	rs12783031	A	G	G	SOX2_HMG_3	11	1	-	4.556545169118901	-2.136146329113445	GAGAAATGACATTGAGA
chr10	73424704	73424705	chr10:73424705:A:C	rs61753915	A	C	C	SOX2_HMG_3	0	1	+	1.5671774146743198	1.0427047920482906	ACCCAAAGGCAGTGATG
chr10	73894417	73894418	chr10:73894418:C:T	rs74614028	C	T	c	SOX2_HMG_3	-18	0	+	0	0	.
chr10	74035491	74035492	chr10:74035492:C:T	rs1471757083	C	T	C	SOX2_HMG_3	26	0	-	0	0	.
chr10	74057259	74057260	chr10:74057260:A:T	rs4587673	A	T	a	SOX2_HMG_3	-20	0	+	0	0	.
chr10	74077446	74077447	chr10:74077447:T:C	rs1908337	T	C	C	SOX2_HMG_3	18	0	+	0	0	.
chr10	74190310	74190311	chr10:74190311:A:G	rs73282475	A	G	A	SOX2_HMG_3	28	0	-	0	0	.
chr10	74190351	74190352	chr10:74190352:G:A	rs115423225	G	A	G	SOX2_HMG_3	-13	0	-	0	0	.
chr10	75192363	75192364	chr10:75192364:G:A	rs77814027	G	A	G	SOX2_HMG_3	2	1	+	4.973471949666223	4.973471949666223	GAGCAATGCAAATGATT
chr10	75230486	75230487	chr10:75230487:C:T	rs11001335	C	T	C	SOX2_HMG_3	1	1	-	6.105370814603615	7.937018404682908	CGACAATGGTATTGTGC
chr10	75230492	75230493	chr10:75230493:T:C	rs556535157	T	C	T	SOX2_HMG_3	-5	0	-	0	0	.
chr10	75409009	75409010	chr10:75409010:T:A	rs181699388	T	A	T	SOX2_HMG_3	24	0	+	0	0	.
chr10	76126978	76126979	chr10:76126979:T:A	rs12098745	T	A	T	SOX2_HMG_3	-2	0	-	0	0	.
chr10	76398378	76398379	chr10:76398379:T:C	rs1907337	T	C	T	SOX2_HMG_3	10	1	-	4.956820039646178	-1.9519347396690419	AATCAGTGGAATTGGTT
chr10	76515059	76515060	chr10:76515060:T:C	rs2130800	T	C	C	SOX2_HMG_3	31	0	+	0	0	.
chr10	76859370	76859371	chr10:76859371:G:A	rs11001906	G	A	G	SOX2_HMG_3	27	0	+	0	0	.
chr10	77007213	77007214	chr10:77007214:G:A	rs12246819	G	A	G	SOX2_HMG_3	15	1	-	3.7801863226395915	6.622895478816449	AGTCAATACAAGTGTCT
chr10	77079625	77079626	chr10:77079626:C:A	rs45495698	C	A	C	SOX2_HMG_3	15	1	+	3.9712049732021693	5.579011692662305	GATCAATTTTACTGTCT
chr10	77162924	77162925	chr10:77162925:G:A	rs569601186	G	A	G	SOX2_HMG_3	-13	0	+	0	0	.
chr10	77301699	77301700	chr10:77301700:G:T	rs7895108	G	T	C	SOX2_HMG_3	0	1	-	2.965411049096487	3.489883671722517	CGTCAATTGAAGTGCAG
chr10	77419586	77419587	chr10:77419587:A:T	rs40430	A	T	T	SOX2_HMG_3	-19	0	+	0	0	.
chr10	77631544	77631545	chr10:77631545:G:A	rs113936647	G	A	G	SOX2_HMG_3	15	1	+	2.577434114275836	3.009907695826737	GGTCACTGCCAGTGTGA
chr10	77639993	77639994	chr10:77639994:G:A	rs2812419	G	A	G	SOX2_HMG_3	-9	0	+	0	0	.
chr10	77664045	77664046	chr10:77664046:C:T	rs2670158	C	T	T	SOX2_HMG_3	-4	0	+	0	0	.
chr10	77679543	77679544	chr10:77679544:A:G	rs80042236	A	G	A	SOX2_HMG_3	11	1	-	3.5550395610794903	-3.1376519371528566	AAGCAAATTTATTGAGT
chr10	78087296	78087297	chr10:78087297:A:G	rs118052062	A	G	A	SOX2_HMG_3	-9	0	+	0	0	.
chr10	78176431	78176432	chr10:78176432:G:A	rs72642297	G	A	G	SOX2_HMG_3	3	1	-	3.4956073935643115	-3.41314738575091	GCTCGATGGCATTGTTC
chr10	78521978	78521979	chr10:78521979:G:A	rs2019080	G	A	G	SOX2_HMG_3	16	1	+	5.4819422375278215	5.2082546211375504	GATCAATATTTTTGTAG
chr10	78543140	78543141	chr10:78543141:C:T	rs55896222	C	T	C	SOX2_HMG_3	0	1	+	3.5709506037048415	3.433621625656177	CGCCAATGACATTGGGA
chr10	78811915	78811916	chr10:78811916:T:C	rs10824649	T	C	T	SOX2_HMG_3	-13	0	-	0	0	.
chr10	78915340	78915341	chr10:78915341:G:C	rs114730985	G	C	G	SOX2_HMG_3	-18	0	+	0	0	.
chr10	78960458	78960459	chr10:78960459:A:G	rs112634910	A	G	A	SOX2_HMG_3	17	0	+	0	0	.
chr10	79005962	79005963	chr10:79005963:G:A	rs10824698	G	A	G	SOX2_HMG_3	-14	0	-	0	0	.
chr10	79037287	79037288	chr10:79037288:C:T	rs113105314	C	T	C	SOX2_HMG_3	33	0	+	0	0	.
chr10	79317900	79317901	chr10:79317901:G:A	rs372536263	G	A	G	SOX2_HMG_3	9	1	-	7.653435663546887	8.460105797483934	AGTCAATGGCATTCAAA
chr10	79385778	79385779	chr10:79385779:T:C	rs1063119	T	C	C	SOX2_HMG_3	29	0	+	0	0	.
chr10	79396997	79396998	chr10:79396998:G:A	rs6480936	G	A	G	SOX2_HMG_3	26	0	+	0	0	.
chr10	79434738	79434739	chr10:79434739:T:C	rs138802101	T	C	T	SOX2_HMG_3	17	0	-	0	0	.
chr10	79507970	79507971	chr10:79507971:A:G	rs78844144	A	G	.	SOX2_HMG_3	5	1	+	3.3482768830951186	-3.560477896220102	CATCAATGGTCCTGAAG
chr10	79948256	79948257	chr10:79948257:C:T	rs723192	C	T	T	SOX2_HMG_3	24	0	+	0	0	.
chr10	79990643	79990644	chr10:79990644:A:G	rs12416455	A	G	G	SOX2_HMG_3	-3	0	+	0	0	.
chr10	80252342	80252343	chr10:80252343:C:T	rs7081164	C	T	.	SOX2_HMG_3	27	0	-	0	0	.
chr10	80613522	80613523	chr10:80613523:G:A	rs11186280	G	A	G	SOX2_HMG_3	-9	0	+	0	0	.
chr10	80663930	80663931	chr10:80663931:C:T	rs1913754	C	T	C	SOX2_HMG_3	-17	0	+	0	0	.
chr10	80684280	80684281	chr10:80684281:G:A	rs66491571	G	A	A	SOX2_HMG_3	-14	0	-	0	0	.
chr10	80684286	80684287	chr10:80684287:C:T	rs67126110	C	T	T	SOX2_HMG_3	-20	0	-	0	0	.
chr10	80948671	80948672	chr10:80948672:C:A	rs7909819	C	A	C	SOX2_HMG_3	-11	0	+	0	0	.
chr10	81526535	81526536	chr10:81526536:A:C	rs2346522	A	C	C	SOX2_HMG_3	5	1	-	3.9634151387523726	3.9634151387523726	CATCATTTCTAGTGACA
chr10	81614714	81614715	chr10:81614715:G:A	rs72817821	G	A	G	SOX2_HMG_3	18	0	-	0	0	.
chr10	81614719	81614720	chr10:81614720:C:T	rs72817822	C	T	C	SOX2_HMG_3	13	1	-	2.884532251833462	-4.024222527481758	TGCCAATAGTAGTGGTG
chr10	81953064	81953065	chr10:81953065:G:C	rs12411402	G	C	G	SOX2_HMG_3	-15	0	-	0	0	.
chr10	82085082	82085083	chr10:82085083:G:A	rs41412145	G	A	G	SOX2_HMG_3	27	0	+	0	0	.
chr10	82149556	82149557	chr10:82149557:A:G	rs143692689	A	G	A	SOX2_HMG_3	15	1	+	6.0291744909924745	5.596700909441575	AATCAATTAAAATGAAG
chr10	82206563	82206564	chr10:82206564:A:G	rs7908131	A	G	A	SOX2_HMG_3	5	1	+	4.230729677387745	-2.6780251019274752	CCCCAATGCCAGTGTTA
chr10	82705370	82705371	chr10:82705371:T:G	rs7074694	T	G	T	SOX2_HMG_3	12	1	+	2.229944565763759	-4.678810213551461	TATCAAGGGTCTTGATC
chr10	83155670	83155671	chr10:83155671:C:T	rs11197543	C	T	C	SOX2_HMG_3	32	0	-	0	0	.
chr10	83273213	83273214	chr10:83273214:T:C	rs79724196	T	C	t	SOX2_HMG_3	-19	0	-	0	0	.
chr10	83633006	83633007	chr10:83633007:G:A	rs12221180	G	A	G	SOX2_HMG_3	-17	0	-	0	0	.
chr10	84224966	84224967	chr10:84224967:G:A	rs11200928	G	A	G	SOX2_HMG_3	-6	0	-	0	0	.
chr10	84704830	84704831	chr10:84704831:T:C	rs945146	T	C	C	SOX2_HMG_3	14	1	+	4.5499035028844155	0.4303786421320172	TATCAAGGACAGTGTTT
chr10	85270551	85270552	chr10:85270552:C:T	rs7895132	C	T	C	SOX2_HMG_3	-19	0	+	0	0	.
chr10	85833027	85833028	chr10:85833028:T:C	rs947594	T	C	T	SOX2_HMG_3	5	1	-	3.529656896732626	-3.3790978825825944	CCTCAATGACAGAGAGG
chr10	86007286	86007287	chr10:86007287:C:T	rs12776960	C	T	C	SOX2_HMG_3	33	0	-	0	0	.
chr10	86123158	86123159	chr10:86123159:C:T	rs11595656	C	T	C	SOX2_HMG_3	-19	0	-	0	0	.
chr10	86155427	86155428	chr10:86155428:G:T	rs187878696	G	T	G	SOX2_HMG_3	-15	0	+	0	0	.
chr10	86170039	86170040	chr10:86170040:C:T	rs12770083	C	T	C	SOX2_HMG_3	-14	0	-	0	0	.
chr10	86254567	86254568	chr10:86254568:T:A	rs79925869	T	A	T	SOX2_HMG_3	1	1	-	2.721197007573309	-0.2848468449500061	TATCAAGGGTTTTGAAA
chr10	86302748	86302749	chr10:86302749:A:G	rs12242059	A	G	A	SOX2_HMG_3	-3	0	+	0	0	.
chr10	86308854	86308855	chr10:86308855:A:T	rs116260881	A	T	A	SOX2_HMG_3	32	0	-	0	0	.
chr10	86441105	86441106	chr10:86441106:G:C	rs17422287	G	C	G	SOX2_HMG_3	20	0	-	0	0	.
chr10	86798713	86798714	chr10:86798714:C:T	rs4933411	C	T	C	SOX2_HMG_3	23	0	+	0	0	.
chr10	87544699	87544700	chr10:87544700:C:T	rs77091479	C	T	C	SOX2_HMG_3	-18	0	-	0	0	.
chr10	87609247	87609248	chr10:87609248:T:C	rs185549563	T	C	T	SOX2_HMG_3	10	1	-	2.5624110424126796	-4.34634373690254	TATCAAAGGTATGGAGG
chr10	87703006	87703007	chr10:87703007:T:C	rs7084129	T	C	C	SOX2_HMG_3	-11	0	+	0	0	.
chr10	87978534	87978535	chr10:87978535:G:A	rs148207180	G	A	G	SOX2_HMG_3	-2	0	-	0	0	.
chr10	88131043	88131044	chr10:88131044:G:C	rs10887784	G	C	G	SOX2_HMG_3	-4	0	-	0	0	.
chr10	88489326	88489327	chr10:88489327:G:T	rs17343533	G	T	G	SOX2_HMG_3	-18	0	-	0	0	.
chr10	88706538	88706539	chr10:88706539:C:T	rs12267931	C	T	C	SOX2_HMG_3	28	0	-	0	0	.
chr10	88794355	88794356	chr10:88794356:T:C	rs303502	T	C	C	SOX2_HMG_3	-6	0	-	0	0	.
chr10	88902328	88902329	chr10:88902329:T:C	rs1968028	T	C	C	SOX2_HMG_3	-14	0	+	0	0	.
chr10	88951543	88951544	chr10:88951544:A:G	rs12264840	A	G	A	SOX2_HMG_3	-12	0	+	0	0	.
chr10	89091620	89091621	chr10:89091621:C:T	rs11202971	C	T	c	SOX2_HMG_3	21	0	-	0	0	.
chr10	89252195	89252196	chr10:89252196:G:T	rs12260368	G	T	G	SOX2_HMG_3	36	0	+	0	0	.
chr10	89342731	89342732	chr10:89342732:T:C	rs1332333	T	C	C	SOX2_HMG_3	5	1	-	2.414005001947209	-4.4947497773680105	AATGAATGTGAGTGAGG
chr10	89615946	89615947	chr10:89615947:C:G	rs1536311	C	G	G	SOX2_HMG_3	-16	0	+	0	0	.
chr10	89849311	89849312	chr10:89849312:T:C	rs10881691	T	C	C	SOX2_HMG_3	22	0	-	0	0	.
chr10	90047646	90047647	chr10:90047647:C:G	rs7078536	C	G	C	SOX2_HMG_3	11	1	-	5.480700247216749	0.20508871820435082	TACCAATTCAAGTGAAA
chr10	90170955	90170956	chr10:90170956:G:A	rs4142854	G	A	G	SOX2_HMG_3	8	1	+	10.172724147229195	9.323680199865565	GAACAATTGCATTGAAT
chr10	90175096	90175097	chr10:90175097:A:G	rs7100222	A	G	A	SOX2_HMG_3	-5	0	+	0	0	.
chr10	90314388	90314389	chr10:90314389:C:T	rs10509599	C	T	C	SOX2_HMG_3	32	0	+	0	0	.
chr10	90343633	90343634	chr10:90343634:A:G	rs75584463	A	G	A	SOX2_HMG_3	-1	0	+	0	0	.
chr10	90451601	90451602	chr10:90451602:A:G	rs137981854	A	G	A	SOX2_HMG_3	21	0	+	0	0	.
chr10	90471079	90471080	chr10:90471080:G:A	rs2490314	G	A	G	SOX2_HMG_3	-20	0	-	0	0	.
chr10	90816632	90816633	chr10:90816633:T:C	rs11813096	T	C	T	SOX2_HMG_3	23	0	+	0	0	.
chr10	90897239	90897240	chr10:90897240:T:C	rs79703029	T	C	T	SOX2_HMG_3	-14	0	+	0	0	.
chr10	90919872	90919873	chr10:90919873:G:C	rs10047267	G	C	C	SOX2_HMG_3	30	0	+	0	0	.
chr10	91088895	91088896	chr10:91088896:A:T	chr10:91088896:A:T	A	T	A	SOX2_HMG_3	4	1	+	3.7779421585596453	-3.130812620755576	GCTAAATGTAATTGTTT
chr10	91412629	91412630	chr10:91412630:T:A	rs190273384	T	A	T	SOX2_HMG_3	-11	0	-	0	0	.
chr10	91412630	91412631	chr10:91412631:A:T	rs55762845	A	T	A	SOX2_HMG_3	-12	0	-	0	0	.
chr10	91545468	91545469	chr10:91545469:C:T	rs10881919	C	T	T	SOX2_HMG_3	-12	0	+	0	0	.
chr10	91594210	91594211	chr10:91594211:G:A	rs60894624	G	A	G	SOX2_HMG_3	15	1	+	4.6820273662966265	5.114500947847526	TAGCAATTACAGTGTGG
chr10	91621611	91621612	chr10:91621612:G:A	rs529680285	G	A	G	SOX2_HMG_3	33	0	-	0	0	.
chr10	91797097	91797098	chr10:91797098:T:C	rs1341263	T	C	T	SOX2_HMG_3	14	1	+	7.266713261232649	3.1471884004802497	TTTCAATATTATTGTGT
chr10	91814160	91814161	chr10:91814161:G:C	rs10881973	G	C	C	SOX2_HMG_3	-17	0	+	0	0	.
chr10	91814205	91814206	chr10:91814206:A:C	rs7067554	A	C	A	SOX2_HMG_3	28	0	+	0	0	.
chr10	91856870	91856871	chr10:91856871:G:T	rs1772188	G	T	G	SOX2_HMG_3	8	1	-	3.5807285647426084	3.4659530501501803	TCACAATACTAGTGTTG
chr10	92981227	92981228	chr10:92981228:A:C	rs10509648	A	C	A	SOX2_HMG_3	0	1	-	2.1435048773879712	3.0259007571479573	TATTCATGTCAGTGATG
chr10	93084108	93084109	chr10:93084109:C:G	rs10748591	C	G	G	SOX2_HMG_3	17	0	-	0	0	.
chr10	93116519	93116520	chr10:93116520:G:C	rs376789697	G	C	G	SOX2_HMG_3	19	0	-	0	0	.
chr10	93250365	93250366	chr10:93250366:A:G	rs1467684	A	G	G	SOX2_HMG_3	5	1	+	3.6944755498716253	-3.2142792294435942	GACCAAAGACATTGAGG
chr10	93255795	93255796	chr10:93255796:G:C	rs1418754	G	C	G	SOX2_HMG_3	22	0	+	0	0	.
chr10	93291274	93291275	chr10:93291275:C:T	rs2761309	C	T	T	SOX2_HMG_3	31	0	-	0	0	.
chr10	93379678	93379679	chr10:93379679:T:C	rs10882228	T	C	C	SOX2_HMG_3	15	1	-	3.5981138132143538	3.165640231663453	GTTCAGTGGTATTGGAG
chr10	93415861	93415862	chr10:93415862:A:C	rs74150226	A	C	A	SOX2_HMG_3	18	0	-	0	0	.
chr10	93445077	93445078	chr10:93445078:A:G	rs61867761	A	G	A	SOX2_HMG_3	6	1	-	5.475436739626555	-1.4333180396886653	TCTCAATATCAGTGTAT
chr10	93475633	93475634	chr10:93475634:A:G	rs77089562	A	G	A	SOX2_HMG_3	-15	0	+	0	0	.
chr10	93475650	93475651	chr10:93475651:T:G	rs7922093	T	G	T	SOX2_HMG_3	2	1	+	3.979230284293234	0.11161544961519376	ATTCAACATCAGTGATG
chr10	93513461	93513462	chr10:93513462:G:A	rs61865356	G	A	G	SOX2_HMG_3	33	0	+	0	0	.
chr10	94007357	94007358	chr10:94007358:T:G	rs891982361	T	G	T	SOX2_HMG_3	26	0	-	0	0	.
chr10	94439474	94439475	chr10:94439475:A:T	rs2151953	A	T	a	SOX2_HMG_3	5	1	+	5.348679420907759	-1.5600753584074627	AGTCAATTTTTTTGTTG
chr10	94439477	94439478	chr10:94439478:T:A	rs74153349	T	A	T	SOX2_HMG_3	8	1	+	5.348679420907759	4.362167553679468	AGTCAATTTTTTTGTTG
chr10	94439501	94439502	chr10:94439502:C:T	rs146146552	C	T	C	SOX2_HMG_3	32	0	+	0	0	.
chr10	94565919	94565920	chr10:94565920:G:A	rs7078478	G	A	A	SOX2_HMG_3	35	0	+	0	0	.
chr10	95122744	95122745	chr10:95122745:A:G	rs7921561	A	G	A	SOX2_HMG_3	6	1	-	3.7679148681772867	-3.140839911137933	AAACAATGGCAGTCAGA
chr10	95406854	95406855	chr10:95406855:C:G	rs35265356	C	G	C	SOX2_HMG_3	-15	0	+	0	0	.
chr10	95424376	95424377	chr10:95424377:G:A	rs1536555	G	A	A	SOX2_HMG_3	-12	0	-	0	0	.
chr10	95878166	95878167	chr10:95878167:T:C	rs75584894	T	C	T	SOX2_HMG_3	6	1	+	9.387795837214508	2.4790410578992863	TATCAATGGGAGTGATT
chr10	96340007	96340008	chr10:96340008:A:G	rs12254238	A	G	G	SOX2_HMG_3	35	0	+	0	0	.
chr10	97131810	97131811	chr10:97131811:G:T	rs74748453	G	T	G	SOX2_HMG_3	28	0	-	0	0	.
chr10	97898164	97898165	chr10:97898165:T:C	rs611527	T	C	C	SOX2_HMG_3	14	1	+	3.6800109270041026	-0.439513933748297	AATCAATTCCACTGTAT
chr10	97946566	97946567	chr10:97946567:T:C	rs511346	T	C	C	SOX2_HMG_3	-14	0	+	0	0	.
chr10	98013127	98013128	chr10:98013128:A:G	rs522110	A	G	A	SOX2_HMG_3	-4	0	+	0	0	.
chr10	98207357	98207358	chr10:98207358:A:G	rs10509720	A	G	A	SOX2_HMG_3	13	1	-	3.9215735936522007	3.9215735936522007	GCTCAATGGAATTTAAC
chr10	98209810	98209811	chr10:98209811:A:G	rs11189513	A	G	A	SOX2_HMG_3	26	0	-	0	0	.
chr10	98264961	98264962	chr10:98264962:C:T	rs149871694	C	T	C	SOX2_HMG_3	-15	0	-	0	0	.
chr10	98404261	98404262	chr10:98404262:A:G	rs111762933	A	G	A	SOX2_HMG_3	29	0	-	0	0	.
chr10	98453578	98453579	chr10:98453579:C:T	rs144232085	C	T	C	SOX2_HMG_3	3	1	+	3.619783946904027	-3.2889708324111924	GGCCAATAGAAGTGAGT
chr10	98515084	98515085	chr10:98515085:C:A	rs11189644	C	A	C	SOX2_HMG_3	18	0	+	0	0	.
chr10	98619421	98619422	chr10:98619422:A:T	rs10748747	A	T	A	SOX2_HMG_3	21	0	-	0	0	.
chr10	98971564	98971565	chr10:98971565:T:C	rs10883233	T	C	T	SOX2_HMG_3	19	0	+	0	0	.
chr10	99563914	99563915	chr10:99563915:G:C	rs1473176	G	C	G	SOX2_HMG_3	27	0	-	0	0	.
chr10	99579740	99579741	chr10:99579741:G:C	rs6584293	G	C	G	SOX2_HMG_3	26	0	+	0	0	.
chr10	99832864	99832865	chr10:99832865:A:G	rs4148398	A	G	G	SOX2_HMG_3	-10	0	+	0	0	.
chr10	99984642	99984643	chr10:99984643:A:G	rs79448306	A	G	A	SOX2_HMG_3	31	0	+	0	0	.
chr10	100363746	100363747	chr10:100363747:C:T	rs1056901	C	T	C	SOX2_HMG_3	-19	0	+	0	0	.
chr10	100384911	100384912	chr10:100384912:A:C	rs1750481	A	C	C	SOX2_HMG_3	9	1	-	3.9201508146537405	-2.519199556446358	AGACAATTTTGTTGATA
chr10	100515884	100515885	chr10:100515885:C:A	rs3750627	C	A	C	SOX2_HMG_3	18	0	-	0	0	.
chr10	100601097	100601098	chr10:100601098:A:G	rs2489003	A	G	A	SOX2_HMG_3	6	1	-	3.20621539789626	-3.70253938141896	GTGCAATGGTATTAAGA
chr10	100837034	100837035	chr10:100837035:C:A	rs56367693	C	A	C	SOX2_HMG_3	31	0	-	0	0	.
chr10	100873526	100873527	chr10:100873527:C:G	rs11190732	C	G	C	SOX2_HMG_3	-19	0	+	0	0	.
chr10	101826598	101826599	chr10:101826599:G:A	rs10883689	G	A	G	SOX2_HMG_3	-11	0	+	0	0	.
chr10	102845158	102845159	chr10:102845159:T:G	rs11191416	T	G	T	SOX2_HMG_3	-12	0	+	0	0	.
chr10	103368758	103368759	chr10:103368759:G:A	rs924710320	G	A	G	SOX2_HMG_3	31	0	+	0	0	.
chr10	103678603	103678604	chr10:103678604:A:G	rs75948892	A	G	A	SOX2_HMG_3	12	1	-	2.8351084549190664	-4.073646324396153	GGTCAAGACCAGTGAGG
chr10	103767393	103767394	chr10:103767394:G:T	rs79636562	G	T	G	SOX2_HMG_3	15	1	+	6.443349591158258	8.11072560942588	GATCAATCTCAGTGAGC
chr10	103767402	103767403	chr10:103767403:A:C	rs55909417	A	C	A	SOX2_HMG_3	24	0	+	0	0	.
chr10	103804165	103804166	chr10:103804166:A:G	rs57229380	A	G	G	SOX2_HMG_3	21	0	+	0	0	.
chr10	104330087	104330088	chr10:104330088:C:T	rs115966612	C	T	C	SOX2_HMG_3	29	0	-	0	0	.
chr10	105585846	105585847	chr10:105585847:T:C	rs75542667	T	C	.	SOX2_HMG_3	7	1	-	2.807489307735373	5.536276428296709	CATCCATAGCAGTGTTT
chr10	106303104	106303105	chr10:106303105:C:T	rs1724045	C	T	C	SOX2_HMG_3	36	0	+	0	0	.
chr10	106338454	106338455	chr10:106338455:A:G	rs6584740	A	G	A	SOX2_HMG_3	-18	0	+	0	0	.
chr10	106424122	106424123	chr10:106424123:T:C	rs7922849	T	C	T	SOX2_HMG_3	30	0	-	0	0	.
chr10	107354831	107354832	chr10:107354832:A:G	rs34722275	A	G	A	SOX2_HMG_3	26	0	-	0	0	.
chr10	107354848	107354849	chr10:107354849:A:G	rs35086200	A	G	A	SOX2_HMG_3	9	1	-	3.7466018710807374	2.9399317371436915	TGGCAATAGTAGTGGTA
chr10	107727349	107727350	chr10:107727350:T:C	rs72827083	T	C	T	SOX2_HMG_3	-6	0	+	0	0	.
chr10	107806282	107806283	chr10:107806283:T:G	rs72829230	T	G	T	SOX2_HMG_3	24	0	+	0	0	.
chr10	107891889	107891890	chr10:107891890:C:T	rs10884559	C	T	T	SOX2_HMG_3	24	0	-	0	0	.
chr10	107917321	107917322	chr10:107917322:A:G	rs12572511	A	G	A	SOX2_HMG_3	-3	0	+	0	0	.
chr10	108512149	108512150	chr10:108512150:T:C	rs11194139	T	C	T	SOX2_HMG_3	0	1	+	4.206608950734013	4.343937928782676	TACCAATGAAAGTGTTC
chr10	108710048	108710049	chr10:108710049:C:T	rs79513749	C	T	C	SOX2_HMG_3	2	1	+	3.43973458151496	8.443106651830547	GACCATTAATATTGATG
chr10	109072889	109072890	chr10:109072890:G:A	rs75241430	G	A	G	SOX2_HMG_3	-8	0	-	0	0	.
chr10	109247318	109247319	chr10:109247319:T:C	rs11194510	T	C	T	SOX2_HMG_3	0	1	+	3.5124815577890405	3.649810535837705	TCTCAATTTTATAGTTG
chr10	109259592	109259593	chr10:109259593:G:A	rs11194519	G	A	G	SOX2_HMG_3	11	1	+	4.077961373194867	-1.197650155817531	TCTCAATTTCAGTGCTG
chr10	109308894	109308895	chr10:109308895:G:A	rs10884741	G	A	A	SOX2_HMG_3	11	1	+	4.2353931117058465	-1.0402184173065512	GGACAATGTCAGTAATG
chr10	109386176	109386177	chr10:109386177:A:G	rs11194617	A	G	A	SOX2_HMG_3	5	1	+	3.130303643465011	-3.7784511358502093	CATCAATAGTTTTGGAG
chr10	109562180	109562181	chr10:109562181:G:A	rs7078049	G	A	a	SOX2_HMG_3	22	0	-	0	0	.
chr10	109931183	109931184	chr10:109931184:C:T	rs12570423	C	T	C	SOX2_HMG_3	-12	0	-	0	0	.
chr10	110135082	110135083	chr10:110135083:C:A	rs115945554	C	A	C	SOX2_HMG_3	17	0	-	0	0	.
chr10	110269776	110269777	chr10:110269777:A:G	rs941893217	A	G	A	SOX2_HMG_3	-14	0	-	0	0	.
chr10	110277815	110277816	chr10:110277816:A:G	rs12243448	A	G	A	SOX2_HMG_3	9	1	-	2.027726952952718	1.221056819015672	GATTAAGGGTAGTGAGG
chr10	110414969	110414970	chr10:110414970:A:G	rs1024829398	A	G	A	SOX2_HMG_3	28	0	-	0	0	.
chr10	110414971	110414972	chr10:110414972:A:C	rs1017587303	A	C	A	SOX2_HMG_3	26	0	-	0	0	.
chr10	110482035	110482036	chr10:110482036:A:G	rs74158104	A	G	A	SOX2_HMG_3	11	1	-	2.4368508730111955	-4.255840625221151	GATAAATGCTATGGAGA
chr10	110513945	110513946	chr10:110513946:A:G	rs10884985	A	G	A	SOX2_HMG_3	9	1	-	3.36725645123084	2.5605863172937933	GGGCAGTGCTAGTGATT
chr10	110721780	110721781	chr10:110721781:T:A	rs7905799	T	A	A	SOX2_HMG_3	-19	0	+	0	0	.
chr10	110725322	110725323	chr10:110725323:C:T	rs73356958	C	T	C	SOX2_HMG_3	-8	0	-	0	0	.
chr10	110850046	110850047	chr10:110850047:A:G	rs4918605	A	G	A	SOX2_HMG_3	-14	0	-	0	0	.
chr10	111333549	111333550	chr10:111333550:A:T	rs73358858	A	T	A	SOX2_HMG_3	18	0	-	0	0	.
chr10	111714784	111714785	chr10:111714785:T:C	rs61871351	T	C	C	SOX2_HMG_3	30	0	-	0	0	.
chr10	111720880	111720881	chr10:111720881:G:A	rs78281897	G	A	G	SOX2_HMG_3	20	0	+	0	0	.
chr10	111748082	111748083	chr10:111748083:G:T	rs11195707	G	T	G	SOX2_HMG_3	-7	0	-	0	0	.
chr10	111776847	111776848	chr10:111776848:A:G	rs1415847	A	G	G	SOX2_HMG_3	1	1	-	2.760341123323553	2.760341123323553	ATTCCATGTCAGTGTAG
chr10	111785820	111785821	chr10:111785821:A:G	rs118095556	A	G	A	SOX2_HMG_3	-10	0	+	0	0	.
chr10	111916518	111916519	chr10:111916519:A:T	rs9633725	A	T	A	SOX2_HMG_3	-20	0	+	0	0	.
chr10	111936431	111936432	chr10:111936432:A:T	rs2111640	A	T	T	SOX2_HMG_3	-14	0	+	0	0	.
chr10	112169144	112169145	chr10:112169145:A:C	rs2803616	A	C	A	SOX2_HMG_3	-4	0	-	0	0	.
chr10	112282189	112282190	chr10:112282190:T:A	rs72819629	T	A	T	SOX2_HMG_3	-16	0	-	0	0	.
chr10	112304212	112304213	chr10:112304213:A:G	rs61431162	A	G	A	SOX2_HMG_3	5	1	+	4.544186868785217	-2.364567910530003	ACTCAATGCTATTTTTT
chr10	112311309	112311310	chr10:112311310:G:T	rs11195886	G	T	T	SOX2_HMG_3	-17	0	+	0	0	.
chr10	112311315	112311316	chr10:112311316:A:G	rs10885328	A	G	G	SOX2_HMG_3	-11	0	+	0	0	.
chr10	112519657	112519658	chr10:112519658:G:A	rs67451905	G	A	G	SOX2_HMG_3	16	1	-	7.50794686917706	8.704718922317413	CCTCAATGCCAGTGTTC
chr10	112632001	112632002	chr10:112632002:A:G	rs76763495	A	G	A	SOX2_HMG_3	2	1	+	5.508423344068014	5.508423344068014	TAACAATATAATTGTAA
chr10	112750919	112750920	chr10:112750920:A:G	rs185984841	A	G	A	SOX2_HMG_3	-6	0	-	0	0	.
chr10	112789374	112789375	chr10:112789375:G:C	rs574984721	G	C	G	SOX2_HMG_3	18	0	-	0	0	.
chr10	112911142	112911143	chr10:112911143:C:A	rs17130145	C	A	A	SOX2_HMG_3	19	0	-	0	0	.
chr10	113317774	113317775	chr10:113317775:C:T	rs1904443	C	T	T	SOX2_HMG_3	26	0	-	0	0	.
chr10	113382500	113382501	chr10:113382501:G:C	rs7089082	G	C	G	SOX2_HMG_3	11	1	+	2.9669972448014055	-2.3086142842109925	GCTCAATGCAAGGGAAT
chr10	113382522	113382523	chr10:113382523:C:T	rs139385895	C	T	C	SOX2_HMG_3	33	0	+	0	0	.
chr10	113488499	113488500	chr10:113488500:C:A	rs1033773	C	A	A	SOX2_HMG_3	36	0	+	0	0	.
chr10	114027293	114027294	chr10:114027294:T:C	rs17091246	T	C	T	SOX2_HMG_3	5	1	-	4.169857064080901	-2.7388977152343186	GCTTAATGGAATTGTTA
chr10	114346509	114346510	chr10:114346510:G:A	rs114584860	G	A	G	SOX2_HMG_3	25	0	-	0	0	.
chr10	114390401	114390402	chr10:114390402:C:T	rs4751756	C	T	C	SOX2_HMG_3	32	0	-	0	0	.
chr10	114442569	114442570	chr10:114442570:A:G	rs1885334	A	G	A	SOX2_HMG_3	4	1	+	14.304297944874914	7.395543165559692	GATCAATGCCAGTGAGG
chr10	114504582	114504583	chr10:114504583:T:C	rs74322313	T	C	T	SOX2_HMG_3	23	0	+	0	0	.
chr10	114547580	114547581	chr10:114547581:C:G	rs41284354	C	G	C	SOX2_HMG_3	-19	0	-	0	0	.
chr10	114551864	114551865	chr10:114551865:G:A	rs4144582	G	A	G	SOX2_HMG_3	17	0	-	0	0	.
chr10	114708075	114708076	chr10:114708076:T:C	rs808262	T	C	T	SOX2_HMG_3	12	1	+	1.885544808831682	-5.0232099704835385	ACTCAACGGTCTTGATG
chr10	114749369	114749370	chr10:114749370:T:C	rs808312	T	C	C	SOX2_HMG_3	33	0	+	0	0	.
chr10	116004616	116004617	chr10:116004617:C:T	rs180653	C	T	T	SOX2_HMG_3	-7	0	-	0	0	.
chr10	116101179	116101180	chr10:116101180:G:C	rs2694779	G	C	G	SOX2_HMG_3	-12	0	+	0	0	.
chr10	116611749	116611750	chr10:116611750:G:C	rs4523611	G	C	G	SOX2_HMG_3	33	0	-	0	0	.
chr10	116797995	116797996	chr10:116797996:C:T	rs1621857	C	T	C	SOX2_HMG_3	-17	0	+	0	0	.
chr10	117228158	117228159	chr10:117228159:G:T	rs2532798	G	T	g	SOX2_HMG_3	-13	0	+	0	0	.
chr10	117271866	117271867	chr10:117271867:T:C	rs2244375	T	C	T	SOX2_HMG_3	-20	0	+	0	0	.
chr10	117436738	117436739	chr10:117436739:C:A	rs2794424	C	A	C	SOX2_HMG_3	-12	0	-	0	0	.
chr10	117663381	117663382	chr10:117663382:G:T	rs12773399	G	T	G	SOX2_HMG_3	20	0	+	0	0	.
chr10	117740969	117740970	chr10:117740970:G:A	rs72829835	G	A	G	SOX2_HMG_3	-9	0	-	0	0	.
chr10	117775444	117775445	chr10:117775445:A:G	rs4752105	A	G	A	SOX2_HMG_3	2	1	-	7.073830232574301	2.0704581622587135	GCTTAATGGTATTGAGA
chr10	117779782	117779783	chr10:117779783:C:T	rs912748	C	T	T	SOX2_HMG_3	-4	0	-	0	0	.
chr10	118374409	118374410	chr10:118374410:G:T	rs10886226	G	T	G	SOX2_HMG_3	31	0	-	0	0	.
chr10	118384825	118384826	chr10:118384826:C:T	rs7083887	C	T	C	SOX2_HMG_3	3	1	+	3.8383410730520384	-3.070413706263181	GAGCAGTGTCATTGACT
chr10	118495310	118495311	chr10:118495311:T:C	rs10787840	T	C	T	SOX2_HMG_3	33	0	+	0	0	.
chr10	118701800	118701801	chr10:118701801:C:G	rs4752189	C	G	G	SOX2_HMG_3	35	0	-	0	0	.
chr10	118807408	118807409	chr10:118807409:A:G	rs7902478	A	G	A	SOX2_HMG_3	19	0	-	0	0	.
chr10	118871096	118871097	chr10:118871097:T:C	rs116203520	T	C	T	SOX2_HMG_3	-1	0	-	0	0	.
chr10	118904398	118904399	chr10:118904399:A:G	rs611959	A	G	G	SOX2_HMG_3	32	0	+	0	0	.
chr10	118932382	118932383	chr10:118932383:G:A	rs148239393	G	A	G	SOX2_HMG_3	-17	0	+	0	0	.
chr10	118947062	118947063	chr10:118947063:C:T	rs11198686	C	T	C	SOX2_HMG_3	-10	0	+	0	0	.
chr10	118961650	118961651	chr10:118961651:T:A	rs10886350	T	A	T	SOX2_HMG_3	-3	0	-	0	0	.
chr10	118961667	118961668	chr10:118961668:C:T	rs80078739	C	T	C	SOX2_HMG_3	-20	0	-	0	0	.
chr10	119178074	119178075	chr10:119178075:C:T	chr10:119178075:C:T	C	T	C	SOX2_HMG_3	-4	0	-	0	0	.
chr10	119218366	119218367	chr10:119218367:A:C	chr10:119218367:A:C	A	C	A	SOX2_HMG_3	20	0	-	0	0	.
chr10	119218402	119218403	chr10:119218403:A:C	chr10:119218403:A:C	A	C	A	SOX2_HMG_3	-16	0	-	0	0	.
chr10	119267806	119267807	chr10:119267807:C:T	rs79383846	C	T	C	SOX2_HMG_3	-8	0	-	0	0	.
chr10	119480966	119480967	chr10:119480967:C:T	rs11198958	C	T	C	SOX2_HMG_3	15	1	-	6.76847964658166	7.20095322813256	AAACAATGGCAGTGGGG
chr10	119480980	119480981	chr10:119480981:T:C	rs36097989	T	C	T	SOX2_HMG_3	1	1	-	6.76847964658166	4.93683205650237	AAACAATGGCAGTGGGG
chr10	119480982	119480983	chr10:119480983:C:G	rs2039486	C	G	C	SOX2_HMG_3	-1	0	-	0	0	.
chr10	120039257	120039258	chr10:120039258:G:C	rs80090331	G	C	G	SOX2_HMG_3	-5	0	+	0	0	.
chr10	120390608	120390609	chr10:120390609:C:T	rs7073577	C	T	C	SOX2_HMG_3	3	1	+	8.658089555637225	1.7493347763220046	GATCAATGCCAATGAAT
chr10	120634701	120634702	chr10:120634702:A:C	rs10886730	A	C	A	SOX2_HMG_3	-13	0	-	0	0	.
chr10	120800180	120800181	chr10:120800181:T:G	rs148141959	T	G	T	SOX2_HMG_3	0	1	-	3.37945985952801	2.8549872369019798	AATCAATCTCACTGAAG
chr10	120923296	120923297	chr10:120923297:A:G	rs11199650	A	G	G	SOX2_HMG_3	-5	0	+	0	0	.
chr10	120941991	120941992	chr10:120941992:G:A	rs4751815	G	A	A	SOX2_HMG_3	-1	0	-	0	0	.
chr10	121514547	121514548	chr10:121514548:C:A	rs3135763	C	A	C	SOX2_HMG_3	-1	0	+	0	0	.
chr10	122022953	122022954	chr10:122022954:A:G	rs2461219	A	G	G	SOX2_HMG_3	-5	0	+	0	0	.
chr10	122047724	122047725	chr10:122047725:C:T	rs3981027	C	T	T	SOX2_HMG_3	35	0	-	0	0	.
chr10	122112283	122112284	chr10:122112284:G:A	rs4751872	G	A	G	SOX2_HMG_3	-6	0	+	0	0	.
chr10	122112315	122112316	chr10:122112316:A:T	rs4752647	A	T	A	SOX2_HMG_3	26	0	+	0	0	.
chr10	122112325	122112326	chr10:122112326:A:G	rs78490550	A	G	A	SOX2_HMG_3	36	0	+	0	0	.
chr10	122189103	122189104	chr10:122189104:G:C	rs7897435	G	C	T	SOX2_HMG_3	22	0	+	0	0	.
chr10	122249411	122249412	chr10:122249412:T:C	rs2273794	T	C	T	SOX2_HMG_3	34	0	+	0	0	.
chr10	122275673	122275674	chr10:122275674:T:G	rs11817245	T	G	T	SOX2_HMG_3	-4	0	+	0	0	.
chr10	122421171	122421172	chr10:122421172:A:G	rs190404754	A	G	A	SOX2_HMG_3	4	1	+	4.843928402827152	-2.0648263764880683	AGTGAATGTCATTGGTA
chr10	122475670	122475671	chr10:122475671:G:A	rs79057333	G	A	G	SOX2_HMG_3	25	0	-	0	0	.
chr10	122475709	122475710	chr10:122475710:T:G	rs72834453	T	G	T	SOX2_HMG_3	-14	0	-	0	0	.
chr10	122566627	122566628	chr10:122566628:A:G	rs1960174	A	G	a	SOX2_HMG_3	8	1	-	3.789905026892618	2.918168674256754	TGTCATTATTAGTGAAA
chr10	122619751	122619752	chr10:122619752:A:G	rs113681994	A	G	A	SOX2_HMG_3	15	1	+	4.688000059731648	4.255526478180747	AAGCAATGTCAGTGCAG
chr10	122878587	122878588	chr10:122878588:G:A	rs35494281	G	A	G	SOX2_HMG_3	11	1	-	2.40113983702964	9.093831335261987	TATCAATTGTCCTGATG
chr10	123194276	123194277	chr10:123194277:A:G	rs556890279	A	G	A	SOX2_HMG_3	23	0	+	0	0	.
chr10	123311917	123311918	chr10:123311918:G:A	rs77653442	G	A	G	SOX2_HMG_3	-19	0	-	0	0	.
chr10	123622019	123622020	chr10:123622020:C:T	rs78246633	C	T	C	SOX2_HMG_3	11	1	-	5.517326407930572	0.2417148789181735	TATCAATCCTAGTGACT
chr10	123916504	123916505	chr10:123916505:A:G	rs17618205	A	G	G	SOX2_HMG_3	6	1	-	12.836321927341533	5.927567148026313	GGTCAATGGCAGTGAAT
chr10	124047815	124047816	chr10:124047816:G:A	rs118132998	G	A	G	SOX2_HMG_3	7	1	+	4.008242925686964	1.2794558051256286	TTTCATTGTCAGTGAAT
chr10	124164510	124164511	chr10:124164511:C:T	rs36140936	C	T	T	SOX2_HMG_3	15	1	-	5.257396538563082	5.689870120113983	AAGCAAAGCTATTGAGA
chr10	124164545	124164546	chr10:124164546:C:T	rs36137529	C	T	C	SOX2_HMG_3	-20	0	-	0	0	.
chr10	124223544	124223545	chr10:124223545:C:T	rs945726647	C	T	C	SOX2_HMG_3	1	1	+	2.702934650311865	2.702934650311865	ACGCAAGGGCAGTGATG
chr10	124224407	124224408	chr10:124224408:G:A	rs999118007	G	A	G	SOX2_HMG_3	0	1	+	3.5941444111021	3.373550132016806	GGTCAGTGAAAGTGAGT
chr10	124232853	124232854	chr10:124232854:A:G	rs12266204	A	G	G	SOX2_HMG_3	18	0	-	0	0	.
chr10	124365655	124365656	chr10:124365656:A:C	rs2674328	A	C	A	SOX2_HMG_3	20	0	+	0	0	.
chr10	124374989	124374990	chr10:124374990:G:C	rs7080814	G	C	C	SOX2_HMG_3	-10	0	-	0	0	.
chr10	124605597	124605598	chr10:124605598:G:A	rs3740540	G	A	G	SOX2_HMG_3	8	1	+	2.15686155718329	1.3078176098196603	GGGCAATGGCAGGGAGA
chr10	124821938	124821939	chr10:124821939:G:A	rs570179882	G	A	A	SOX2_HMG_3	10	1	-	3.1649285387795882	3.1649285387795882	TATCAATACACGTGAAG
chr10	124876657	124876658	chr10:124876658:G:A	rs183821302	G	A	g	SOX2_HMG_3	23	0	-	0	0	.
chr10	125061347	125061348	chr10:125061348:C:T	rs1415315278	C	T	C	SOX2_HMG_3	27	0	-	0	0	.
chr10	125117193	125117194	chr10:125117194:G:A	rs74163343	G	A	G	SOX2_HMG_3	21	0	+	0	0	.
chr10	125145611	125145612	chr10:125145612:C:T	rs139121751	C	T	C	SOX2_HMG_3	32	0	-	0	0	.
chr10	125235829	125235830	chr10:125235830:A:G	rs61869235	A	G	A	SOX2_HMG_3	32	0	-	0	0	.
chr10	125476050	125476051	chr10:125476051:T:C	rs79246833	T	C	T	SOX2_HMG_3	-8	0	+	0	0	.
chr10	126046957	126046958	chr10:126046958:C:G	rs1459712	C	G	C	SOX2_HMG_3	34	0	-	0	0	.
chr10	126092099	126092100	chr10:126092100:C:T	rs11517288	C	T	C	SOX2_HMG_3	25	0	-	0	0	.
chr10	126240404	126240405	chr10:126240405:A:G	rs4962524	A	G	G	SOX2_HMG_3	-12	0	+	0	0	.
chr10	126262326	126262327	chr10:126262327:T:C	rs11244919	T	C	T	SOX2_HMG_3	0	1	-	2.0469456489250386	2.2675399280103323	AATCATTGGCATGGAAT
chr10	126262328	126262329	chr10:126262329:T:C	rs7090615	T	C	T	SOX2_HMG_3	-2	0	-	0	0	.
chr10	126352269	126352270	chr10:126352270:T:C	rs11597735	T	C	T	SOX2_HMG_3	31	0	-	0	0	.
chr10	126423482	126423483	chr10:126423483:C:T	rs35124467	C	T	C	SOX2_HMG_3	23	0	+	0	0	.
chr10	126598061	126598062	chr10:126598062:A:G	rs2804424	A	G	C	SOX2_HMG_3	12	1	-	5.103794265262231	-1.8049605140529896	GAGGAATGCCATTGAAA
chr10	126733581	126733582	chr10:126733582:A:C	rs11245119	A	C	A	SOX2_HMG_3	19	0	+	0	0	.
chr10	126900454	126900455	chr10:126900455:A:G	rs55952399	A	G	A	SOX2_HMG_3	5	1	+	5.720267417228522	-1.1884873620866985	GCTCAATGAAACTGATT
chr10	126908931	126908932	chr10:126908932:C:G	rs139057052	C	G	C	SOX2_HMG_3	-11	0	+	0	0	.
chr10	126950473	126950474	chr10:126950474:T:C	rs934756832	T	C	C	SOX2_HMG_3	24	0	+	0	0	.
chr10	127022883	127022884	chr10:127022884:A:G	rs2275535	A	G	G	SOX2_HMG_3	-8	0	+	0	0	.
chr10	127022910	127022911	chr10:127022911:C:T	rs2275536	C	T	C	SOX2_HMG_3	19	0	+	0	0	.
chr10	127338552	127338553	chr10:127338553:G:T	rs143632803	G	T	G	SOX2_HMG_3	36	0	+	0	0	.
chr10	127386055	127386056	chr10:127386056:T:G	rs7090055	T	G	G	SOX2_HMG_3	25	0	+	0	0	.
chr10	127418393	127418394	chr10:127418394:T:C	rs2229600	T	C	C	SOX2_HMG_3	12	1	+	2.8396730936320385	-4.069081685683181	GGAGAATGCCATTGAGA
chr10	127449750	127449751	chr10:127449751:G:C	rs55798271	G	C	G	SOX2_HMG_3	30	0	-	0	0	.
chr10	127449779	127449780	chr10:127449780:T:A	rs11018104	T	A	T	SOX2_HMG_3	1	1	-	7.107821438819926	4.101777586296611	GATCAATGAGAGTGACA
chr10	127450874	127450875	chr10:127450875:C:G	rs952199	C	G	C	SOX2_HMG_3	-16	0	-	0	0	.
chr10	127549086	127549087	chr10:127549087:T:G	rs7894110	T	G	G	SOX2_HMG_3	-10	0	+	0	0	.
chr10	127813614	127813615	chr10:127813615:T:G	rs35138655	T	G	T	SOX2_HMG_3	23	0	-	0	0	.
chr10	128031464	128031465	chr10:128031465:C:T	rs67895236	C	T	C	SOX2_HMG_3	-20	0	-	0	0	.
chr10	128094873	128094874	chr10:128094874:T:G	rs71474249	T	G	T	SOX2_HMG_3	21	0	-	0	0	.
chr10	128095853	128095854	chr10:128095854:A:G	rs11599823	A	G	G	SOX2_HMG_3	4	1	+	5.562593435828435	-1.3461613434867852	ACTCAATGCCAGTAATA
chr10	128095861	128095862	chr10:128095862:T:G	rs6482657	T	G	G	SOX2_HMG_3	12	1	+	5.562593435828435	-1.3461613434867852	ACTCAATGCCAGTAATA
chr10	128196314	128196315	chr10:128196315:T:C	rs6482665	T	C	T	SOX2_HMG_3	-11	0	+	0	0	.
chr10	128296099	128296100	chr10:128296100:G:A	rs11016163	G	A	G	SOX2_HMG_3	-19	0	+	0	0	.
chr10	128377497	128377498	chr10:128377498:T:C	rs11016203	T	C	T	SOX2_HMG_3	-8	0	+	0	0	.
chr10	128473820	128473821	chr10:128473821:A:G	rs12411816	A	G	A	SOX2_HMG_3	-14	0	-	0	0	.
chr10	128633052	128633053	chr10:128633053:G:A	rs11016397	G	A	G	SOX2_HMG_3	19	0	-	0	0	.
chr10	129061801	129061802	chr10:129061802:G:A	rs77864537	G	A	G	SOX2_HMG_3	-18	0	+	0	0	.
chr10	129121768	129121769	chr10:129121769:C:T	rs944786934	C	T	C	SOX2_HMG_3	20	0	-	0	0	.
chr10	129121769	129121770	chr10:129121770:G:A	rs12774177	G	A	G	SOX2_HMG_3	19	0	-	0	0	.
chr10	129121807	129121808	chr10:129121808:C:G	rs10829576	C	G	C	SOX2_HMG_3	-19	0	-	0	0	.
chr10	129139984	129139985	chr10:129139985:A:G	rs60984334	A	G	a	SOX2_HMG_3	-16	0	+	0	0	.
chr10	129192709	129192710	chr10:129192710:A:G	rs73388493	A	G	A	SOX2_HMG_3	-3	0	+	0	0	.
chr10	129323544	129323545	chr10:129323545:C:T	rs72831461	C	T	C	SOX2_HMG_3	28	0	+	0	0	.
chr10	129726562	129726563	chr10:129726563:G:A	rs6482753	G	A	G	SOX2_HMG_3	7	1	+	3.164775133839304	0.43598801327796943	GAACAGTGGCATTGGTG
chr10	129757378	129757379	chr10:129757379:C:T	chr10:129757379:C:T	C	T	C	SOX2_HMG_3	34	0	+	0	0	.
chr10	129946902	129946903	chr10:129946903:T:C	rs10829664	T	C	C	SOX2_HMG_3	19	0	+	0	0	.
chr10	129946912	129946913	chr10:129946913:C:T	rs150599731	C	T	C	SOX2_HMG_3	29	0	+	0	0	.
chr10	129956177	129956178	chr10:129956178:C:T	rs77059422	C	T	C	SOX2_HMG_3	-12	0	-	0	0	.
chr10	129981365	129981366	chr10:129981366:C:T	rs10829672	C	T	C	SOX2_HMG_3	-10	0	+	0	0	.
chr10	129981374	129981375	chr10:129981375:A:G	rs642073	A	G	G	SOX2_HMG_3	-1	0	+	0	0	.
chr10	130172401	130172402	chr10:130172402:G:C	rs1016374	G	C	G	SOX2_HMG_3	21	0	-	0	0	.
chr10	130353913	130353914	chr10:130353914:C:T	rs12569655	C	T	C	SOX2_HMG_3	3	1	+	2.9621869636640508	-3.9465678156511697	AATCGATGACATGGATA
chr10	130484382	130484383	chr10:130484383:T:C	rs2484214	T	C	C	SOX2_HMG_3	-14	0	+	0	0	.
chr10	130493703	130493704	chr10:130493704:A:G	rs4751209	A	G	a	SOX2_HMG_3	34	0	-	0	0	.
chr10	130636218	130636219	chr10:130636219:A:C	rs1176472	A	C	C	SOX2_HMG_3	20	0	+	0	0	.
chr10	130708698	130708699	chr10:130708699:A:G	rs12571561	A	G	A	SOX2_HMG_3	5	1	+	2.0811358113603484	-4.827618967954872	TGGCAATGGTGGTGAGA
chr10	130708704	130708705	chr10:130708705:G:A	rs59684255	G	A	G	SOX2_HMG_3	11	1	+	2.0811358113603484	-3.1944757176520495	TGGCAATGGTGGTGAGA
chr10	130750519	130750520	chr10:130750520:C:G	rs10829786	C	G	C	SOX2_HMG_3	29	0	-	0	0	.
chr10	130756788	130756789	chr10:130756789:C:T	rs12243906	C	T	C	SOX2_HMG_3	23	0	+	0	0	.
chr10	130847783	130847784	chr10:130847784:G:A	rs7076678	G	A	A	SOX2_HMG_3	33	0	-	0	0	.
chr10	130878824	130878825	chr10:130878825:T:C	rs1703688	T	C	C	SOX2_HMG_3	36	0	+	0	0	.
chr10	131005686	131005687	chr10:131005687:T:C	rs11017653	T	C	C	SOX2_HMG_3	19	0	-	0	0	.
chr10	131011258	131011259	chr10:131011259:C:T	rs80035223	C	T	C	SOX2_HMG_3	-1	0	+	0	0	.
chr10	131088792	131088793	chr10:131088793:G:A	rs75923096	G	A	G	SOX2_HMG_3	19	0	+	0	0	.
chr10	131090192	131090193	chr10:131090193:T:C	rs7902801	T	C	C	SOX2_HMG_3	-9	0	-	0	0	.
chr10	131122980	131122981	chr10:131122981:G:C	rs12415526	G	C	G	SOX2_HMG_3	-14	0	-	0	0	.
chr10	131136143	131136144	chr10:131136144:C:G	rs56859243	C	G	G	SOX2_HMG_3	10	1	-	3.3108846247413566	3.3108846247413566	TATCAATGGTGTTGGCT
chr10	131170129	131170130	chr10:131170130:C:A	rs2918152	C	A	A	SOX2_HMG_3	13	1	-	7.2189593370426	0.31020455772737954	AATCAATGACTGTGAAA
chr10	131170137	131170138	chr10:131170138:T:C	rs7912888	T	C	T	SOX2_HMG_3	5	1	-	7.2189593370426	0.3102045577273793	AATCAATGACTGTGAAA
chr10	131244715	131244716	chr10:131244716:A:C	rs73398434	A	C	C	SOX2_HMG_3	5	1	+	5.965365247416956	-0.9433895318982657	GCTCAAAGCCATTGAAA
chr10	131244743	131244744	chr10:131244744:A:G	rs72841353	A	G	A	SOX2_HMG_3	33	0	+	0	0	.
chr10	131291023	131291024	chr10:131291024:G:C	rs1530066	G	C	C	SOX2_HMG_3	35	0	+	0	0	.
chr10	131326697	131326698	chr10:131326698:A:G	rs4609515	A	G	A	SOX2_HMG_3	-18	0	+	0	0	.
chr10	131539618	131539619	chr10:131539619:G:A	rs11018026	G	A	G	SOX2_HMG_3	19	0	+	0	0	.
chr10	131579085	131579086	chr10:131579086:A:G	rs75002802	A	G	A	SOX2_HMG_3	-12	0	+	0	0	.
chr10	131581163	131581164	chr10:131581164:A:G	rs11018076	A	G	G	SOX2_HMG_3	-2	0	+	0	0	.
chr10	131674180	131674181	chr10:131674181:C:G	rs12573695	C	G	C	SOX2_HMG_3	18	0	-	0	0	.
chr10	131718887	131718888	chr10:131718888:T:C	rs7905620	T	C	T	SOX2_HMG_3	33	0	+	0	0	.
chr10	131731481	131731482	chr10:131731482:C:T	rs7905678	C	T	T	SOX2_HMG_3	-14	0	+	0	0	.
chr10	132109946	132109947	chr10:132109947:C:A	chr10:132109947:C:A	C	A	C	SOX2_HMG_3	18	0	+	0	0	.
chr10	132109959	132109960	chr10:132109960:G:A	rs78159143	G	A	G	SOX2_HMG_3	31	0	+	0	0	.
chr10	132140734	132140735	chr10:132140735:C:T	rs9733882	C	T	C	SOX2_HMG_3	17	0	-	0	0	.
chr10	132377500	132377501	chr10:132377501:A:C	rs4443996	A	C	C	SOX2_HMG_3	6	1	-	5.817375783253929	-1.0913789960612934	CATCAATGGCAGGGAAC
chr10	132505324	132505325	chr10:132505325:G:T	rs377500039	G	T	G	SOX2_HMG_3	7	1	+	1.8804767881218234	-0.1642337166117125	GATCAGCGCCAGTGATA
chr10	132505654	132505655	chr10:132505655:G:T	rs113200869	G	T	-	SOX2_HMG_3	7	1	+	1.8804767881218234	-0.1642337166117125	GATCAGCGCCAGTGATA
chr10	132878605	132878606	chr10:132878606:A:G	rs4880459	A	G	G	SOX2_HMG_3	6	1	-	3.323191169715436	-3.5855636095997863	GCTCAATGTTATTCTCA
chr10	132973707	132973708	chr10:132973708:C:G	rs11146071	C	G	C	SOX2_HMG_3	14	1	-	2.1162863909504828	-0.5341346973150909	GGTCAAGGGCAGTGGGG
chr11	464290	464291	chr11:464291:C:T	rs6598017	C	T	T	SOX2_HMG_3	-9	0	+	0	0	.
chr11	511579	511580	chr11:511580:C:T	rs3993797	C	T	C	SOX2_HMG_3	29	0	-	0	0	.
chr11	711205	711206	chr11:711206:G:T	rs373368595	G	T	G	SOX2_HMG_3	18	0	+	0	0	.
chr11	737406	737407	chr11:737407:C:T	rs77425439	C	T	C	SOX2_HMG_3	30	0	+	0	0	.
chr11	889408	889409	chr11:889409:C:T	rs116814669	C	T	C	SOX2_HMG_3	-15	0	-	0	0	.
chr11	1017595	1017596	chr11:1017596:T:G	rs201522029	T	G	-	SOX2_HMG_3	-18	0	+	0	0	.
chr11	1351703	1351704	chr11:1351704:C:T	rs12290143	C	T	c	SOX2_HMG_3	7	1	-	4.24137186604759	1.5125847454862553	TCTCAAAGGCAGTGAGG
chr11	1351705	1351706	chr11:1351706:T:C	rs12294337	T	C	N	SOX2_HMG_3	5	1	-	4.24137186604759	-2.6673829132676303	TCTCAAAGGCAGTGAGG
chr11	1351705	1351706	chr11:1351706:T:G	chr11:1351706:T:G	T	G	N	SOX2_HMG_3	5	1	-	4.24137186604759	-2.6673829132676303	TCTCAAAGGCAGTGAGG
chr11	1362976	1362977	chr11:1362977:A:G	rs6421029	A	G	g	SOX2_HMG_3	6	1	-	5.545759276801072	-1.3629955025141485	AATCACTGTAAGTGACA
chr11	1568469	1568470	chr11:1568470:T:A	rs115277124	T	A	T	SOX2_HMG_3	7	1	-	6.336476368218252	7.02055298404605	TAACAATACTATTGTGG
chr11	1589530	1589531	chr11:1589531:T:C	rs11035024	T	C	-	SOX2_HMG_3	-20	0	-	0	0	.
chr11	1640096	1640097	chr11:1640097:C:T	rs78651552	C	T	c	SOX2_HMG_3	-6	0	+	0	0	.
chr11	1693233	1693234	chr11:1693234:G:A	rs16927505	G	A	A	SOX2_HMG_3	30	0	+	0	0	.
chr11	1736772	1736773	chr11:1736773:G:C	rs1040480641	G	C	G	SOX2_HMG_3	8	1	+	7.836432892253927	7.102164459482727	AGTCAATGGAATGGATA
chr11	1859840	1859841	chr11:1859841:G:A	rs587074	G	A	G	SOX2_HMG_3	31	0	-	0	0	.
chr11	1908771	1908772	chr11:1908772:G:T	rs758647496	G	T	g	SOX2_HMG_3	22	0	-	0	0	.
chr11	2213568	2213569	chr11:2213569:G:A	rs918657208	G	A	A	SOX2_HMG_3	-4	0	-	0	0	.
chr11	2265900	2265901	chr11:2265901:C:T	rs78652578	C	T	C	SOX2_HMG_3	25	0	+	0	0	.
chr11	2298124	2298125	chr11:2298125:C:T	rs2244891	C	T	C	SOX2_HMG_3	17	0	-	0	0	.
chr11	2410167	2410168	chr11:2410168:C:T	rs569145555	C	T	C	SOX2_HMG_3	26	0	+	0	0	.
chr11	2510673	2510674	chr11:2510674:G:T	rs73419549	G	T	G	SOX2_HMG_3	25	0	+	0	0	.
chr11	2542546	2542547	chr11:2542547:C:T	rs111405535	C	T	C	SOX2_HMG_3	11	1	-	4.670707513518723	-0.6049040154936749	TCTCAATTGTGGTGATG
chr11	2760765	2760766	chr11:2760766:A:G	rs7938536	A	G	A	SOX2_HMG_3	21	0	+	0	0	.
chr11	2799197	2799198	chr11:2799198:G:A	rs7112108	G	A	G	SOX2_HMG_3	24	0	+	0	0	.
chr11	3052419	3052420	chr11:3052420:T:C	rs11827189	T	C	T	SOX2_HMG_3	9	1	+	7.054645861938898	6.247975728001853	TATTAATGTTATTGTAA
chr11	3207242	3207243	chr11:3207243:T:A	rs11025941	T	A	T	SOX2_HMG_3	-6	0	-	0	0	.
chr11	3626297	3626298	chr11:3626298:A:C	rs17173897	A	C	N	SOX2_HMG_3	-5	0	-	0	0	.
chr11	3626299	3626300	chr11:3626300:C:G	rs17173896	C	G	c	SOX2_HMG_3	-7	0	-	0	0	.
chr11	3736997	3736998	chr11:3736998:A:G	rs276909	A	G	G	SOX2_HMG_3	30	0	+	0	0	.
chr11	3801342	3801343	chr11:3801343:T:G	rs10767606	T	G	T	SOX2_HMG_3	21	0	+	0	0	.
chr11	3882897	3882898	chr11:3882898:A:C	rs12574293	A	C	A	SOX2_HMG_3	33	0	-	0	0	.
chr11	4682885	4682886	chr11:4682886:G:A	rs79815978	G	A	G	SOX2_HMG_3	-12	0	+	0	0	.
chr11	4761304	4761305	chr11:4761305:T:G	rs78425414	T	G	T	SOX2_HMG_3	-19	0	-	0	0	.
chr11	5059003	5059004	chr11:5059004:T:C	rs2445333	T	C	.	SOX2_HMG_3	25	0	+	0	0	.
chr11	5196478	5196479	chr11:5196479:G:A	rs12804890	G	A	G	SOX2_HMG_3	-7	0	-	0	0	.
chr11	5677724	5677725	chr11:5677725:A:G	rs10769173	A	G	G	SOX2_HMG_3	-10	0	+	0	0	.
chr11	5701415	5701416	chr11:5701416:C:T	rs4604919	C	T	T	SOX2_HMG_3	17	0	+	0	0	.
chr11	5788515	5788516	chr11:5788516:C:T	rs10742787	C	T	C	SOX2_HMG_3	-15	0	+	0	0	.
chr11	5815556	5815557	chr11:5815557:T:A	rs11039135	T	A	T	SOX2_HMG_3	-18	0	+	0	0	.
chr11	5815608	5815609	chr11:5815609:A:C	rs10838673	A	C	C	SOX2_HMG_3	34	0	+	0	0	.
chr11	5982231	5982232	chr11:5982232:C:T	rs1006302563	C	T	C	SOX2_HMG_3	26	0	+	0	0	.
chr11	6124402	6124403	chr11:6124403:G:A	rs72900422	G	A	G	SOX2_HMG_3	31	0	+	0	0	.
chr11	6289441	6289442	chr11:6289442:T:C	rs61876737	T	C	T	SOX2_HMG_3	4	1	-	3.591806995772838	-3.3169477835423815	GCTCAATTTTTTTGTTT
chr11	6402399	6402400	chr11:6402400:G:C	rs2075583	G	C	T	SOX2_HMG_3	-16	0	-	0	0	.
chr11	6602950	6602951	chr11:6602951:T:C	rs4758438	T	C	T	SOX2_HMG_3	34	0	+	0	0	.
chr11	6609310	6609311	chr11:6609311:C:T	rs140322345	C	T	C	SOX2_HMG_3	-8	0	+	0	0	.
chr11	6677175	6677176	chr11:6677176:T:C	rs142644037	T	C	T	SOX2_HMG_3	12	1	+	5.226117467530146	-1.6826373117850744	ATACAATGGAATTGTAT
chr11	6707622	6707623	chr11:6707623:C:T	rs12361973	C	T	C	SOX2_HMG_3	-9	0	-	0	0	.
chr11	6747423	6747424	chr11:6747424:A:G	rs10839610	A	G	A	SOX2_HMG_3	-13	0	+	0	0	.
chr11	6969084	6969085	chr11:6969085:G:A	rs181587370	G	A	G	SOX2_HMG_3	23	0	-	0	0	.
chr11	7015978	7015979	chr11:7015979:G:A	rs10839689	G	A	A	SOX2_HMG_3	-16	0	+	0	0	.
chr11	7015984	7015985	chr11:7015985:C:T	rs10839690	C	T	C	SOX2_HMG_3	-10	0	+	0	0	.
chr11	7309472	7309473	chr11:7309473:A:G	rs11041306	A	G	A	SOX2_HMG_3	6	1	-	9.907339974745101	2.9985851954298806	GGACAATGACATTGAGG
chr11	7486719	7486720	chr11:7486720:T:C	rs71461818	T	C	T	SOX2_HMG_3	-13	0	-	0	0	.
chr11	7511996	7511997	chr11:7511997:A:G	rs4370912	A	G	A	SOX2_HMG_3	26	0	+	0	0	.
chr11	7857720	7857721	chr11:7857721:C:G	rs7126830	C	G	G	SOX2_HMG_3	25	0	+	0	0	.
chr11	7869583	7869584	chr11:7869584:T:G	rs17222598	T	G	T	SOX2_HMG_3	-14	0	+	0	0	.
chr11	7909830	7909831	chr11:7909831:T:G	rs539539434	T	G	T	SOX2_HMG_3	-1	0	-	0	0	.
chr11	8051688	8051689	chr11:8051689:C:T	rs7949880	C	T	T	SOX2_HMG_3	-17	0	-	0	0	.
chr11	8055760	8055761	chr11:8055761:C:T	rs58666270	C	T	C	SOX2_HMG_3	28	0	+	0	0	.
chr11	8065367	8065368	chr11:8065368:T:C	rs55961435	T	C	T	SOX2_HMG_3	-1	0	+	0	0	.
chr11	8233860	8233861	chr11:8233861:C:A	rs2168101	C	A	C	SOX2_HMG_3	18	0	+	0	0	.
chr11	8300174	8300175	chr11:8300175:T:C	rs11041854	T	C	T	SOX2_HMG_3	-3	0	-	0	0	.
chr11	8350952	8350953	chr11:8350953:G:A	rs6578961	G	A	G	SOX2_HMG_3	7	1	+	4.806841218166575	2.07805409760524	GAACAATGACAGGGATA
chr11	8681027	8681028	chr11:8681028:C:T	rs117631225	C	T	C	SOX2_HMG_3	31	0	+	0	0	.
chr11	8767617	8767618	chr11:8767618:G:C	rs56210063	G	C	G	SOX2_HMG_3	7	1	+	3.755321632489819	-2.977520578946155	AGGCAATGACAGTGGTC
chr11	8868082	8868083	chr11:8868083:T:C	rs2653567	T	C	T	SOX2_HMG_3	21	0	+	0	0	.
chr11	8912305	8912306	chr11:8912306:T:G	rs2742519	T	G	T	SOX2_HMG_3	27	0	-	0	0	.
chr11	8912342	8912343	chr11:8912343:T:G	rs79634295	T	G	T	SOX2_HMG_3	-10	0	-	0	0	.
chr11	8988458	8988459	chr11:8988459:A:C	rs2568047	A	C	A	SOX2_HMG_3	-15	0	-	0	0	.
chr11	9012371	9012372	chr11:9012372:G:A	chr11:9012372:G:A	G	A	C	SOX2_HMG_3	7	1	+	3.4522025850587092	0.723415464497375	TAGCCATGCTAGTGAGG
chr11	9021021	9021022	chr11:9021022:T:C	rs1367	T	C	T	SOX2_HMG_3	9	1	+	3.6381659203001204	2.8314957863630745	GAACATTTGTATTGAGT
chr11	9023219	9023220	chr11:9023220:G:A	rs932287	G	A	A	SOX2_HMG_3	-5	0	+	0	0	.
chr11	9150884	9150885	chr11:9150885:A:G	rs10769995	A	G	A	SOX2_HMG_3	7	1	-	9.553226995517031	4.865095288814591	AATCAATTAAAGTGTTA
chr11	9281068	9281069	chr11:9281069:A:G	rs11042260	A	G	A	SOX2_HMG_3	-10	0	+	0	0	.
chr11	9357440	9357441	chr11:9357441:T:G	rs1579065	T	G	T	SOX2_HMG_3	10	1	-	4.5346418737566125	-2.3741129055586097	TATCAAAGGCAGTGTGG
chr11	9401993	9401994	chr11:9401994:C:T	rs12795344	C	T	C	SOX2_HMG_3	18	0	+	0	0	.
chr11	9567113	9567114	chr11:9567114:C:T	rs75967252	C	T	C	SOX2_HMG_3	-11	0	-	0	0	.
chr11	9600866	9600867	chr11:9600867:G:A	rs11042440	G	A	G	SOX2_HMG_3	28	0	-	0	0	.
chr11	9878592	9878593	chr11:9878593:C:T	rs67701335	C	T	C	SOX2_HMG_3	35	0	-	0	0	.
chr11	9936930	9936931	chr11:9936931:T:C	rs11042557	T	C	T	SOX2_HMG_3	34	0	-	0	0	.
chr11	10207299	10207300	chr11:10207300:G:A	rs1867135	G	A	A	SOX2_HMG_3	26	0	-	0	0	.
chr11	10244329	10244330	chr11:10244330:G:A	rs72850420	G	A	G	SOX2_HMG_3	18	0	+	0	0	.
chr11	10307195	10307196	chr11:10307196:G:T	rs35440828	G	T	G	SOX2_HMG_3	13	1	+	4.392403437302536	-2.5163513420126846	AAGCAATTATATTGTCC
chr11	10439926	10439927	chr11:10439927:G:C	rs11042804	G	C	C	SOX2_HMG_3	-15	0	-	0	0	.
chr11	10594828	10594829	chr11:10594829:A:G	rs76591464	A	G	A	SOX2_HMG_3	16	1	-	3.180901860791258	1.984129807650904	GCTAAATGATATTGGTT
chr11	10610704	10610705	chr11:10610705:A:G	rs964426	A	G	G	SOX2_HMG_3	29	0	-	0	0	.
chr11	10796304	10796305	chr11:10796305:A:C	rs142260364	A	C	C	SOX2_HMG_3	23	0	-	0	0	.
chr11	10885884	10885885	chr11:10885885:T:A	rs10840505	T	A	T	SOX2_HMG_3	17	0	+	0	0	.
chr11	10896731	10896732	chr11:10896732:A:C	rs2896567	A	C	C	SOX2_HMG_3	22	0	-	0	0	.
chr11	11176703	11176704	chr11:11176704:T:C	rs2655103	T	C	C	SOX2_HMG_3	6	1	+	3.537538456840919	-3.3712163224743015	GTGCAATGGCATAGATT
chr11	11247469	11247470	chr11:11247470:G:T	rs188318933	G	T	G	SOX2_HMG_3	2	1	-	3.6017330114640567	4.7374902471016025	GACCATTTTTATTGAAA
chr11	11451539	11451540	chr11:11451540:G:A	rs11827435	G	A	G	SOX2_HMG_3	32	0	+	0	0	.
chr11	11451541	11451542	chr11:11451542:A:G	rs11822766	A	G	G	SOX2_HMG_3	34	0	+	0	0	.
chr11	11659387	11659388	chr11:11659388:G:A	rs7480726	G	A	G	SOX2_HMG_3	30	0	-	0	0	.
chr11	11783619	11783620	chr11:11783620:G:A	rs28713685	G	A	G	SOX2_HMG_3	32	0	-	0	0	.
chr11	11783663	11783664	chr11:11783664:G:A	rs2124231	G	A	G	SOX2_HMG_3	-12	0	-	0	0	.
chr11	11987592	11987593	chr11:11987593:T:C	rs977792	T	C	C	SOX2_HMG_3	-3	0	-	0	0	.
chr11	11998478	11998479	chr11:11998479:A:C	rs3750938	A	C	C	SOX2_HMG_3	2	1	-	4.798161465667803	0.9305466309897636	GATAAATTAAATTGAGT
chr11	12030202	12030203	chr11:12030203:T:C	rs79681203	T	C	T	SOX2_HMG_3	6	1	+	4.591645278435912	-2.3171095008793077	AATGAATGGCAGTGGTT
chr11	12138369	12138370	chr11:12138370:T:C	chr11:12138370:T:C	T	C	T	SOX2_HMG_3	-2	0	-	0	0	.
chr11	12147753	12147754	chr11:12147754:G:A	rs4644628	G	A	A	SOX2_HMG_3	-15	0	+	0	0	.
chr11	12270460	12270461	chr11:12270461:T:C	rs59709231	T	C	T	SOX2_HMG_3	6	1	+	2.471732035394858	-4.437022743920361	CAGCAGTGGCAGTGTTG
chr11	12391382	12391383	chr11:12391383:T:C	rs114951396	T	C	T	SOX2_HMG_3	-16	0	+	0	0	.
chr11	12525264	12525265	chr11:12525265:A:G	rs1426587	A	G	G	SOX2_HMG_3	-18	0	+	0	0	.
chr11	12540834	12540835	chr11:12540835:T:G	rs16864	T	G	T	SOX2_HMG_3	33	0	+	0	0	.
chr11	12565842	12565843	chr11:12565843:T:C	rs67512993	T	C	T	SOX2_HMG_3	20	0	+	0	0	.
chr11	12569480	12569481	chr11:12569481:A:G	rs77503259	A	G	A	SOX2_HMG_3	15	1	+	3.359373785336992	2.9269002037860914	AGTCAATGGAATAGTAT
chr11	12578296	12578297	chr11:12578297:T:G	rs12271125	T	G	G	SOX2_HMG_3	33	0	+	0	0	.
chr11	12973583	12973584	chr11:12973584:G:C	rs61878838	G	C	C	SOX2_HMG_3	-8	0	-	0	0	.
chr11	13070865	13070866	chr11:13070866:G:C	rs11022630	G	C	g	SOX2_HMG_3	-14	0	-	0	0	.
chr11	13210844	13210845	chr11:13210845:T:G	rs11022706	T	G	T	SOX2_HMG_3	12	1	+	6.876818858345616	-0.031935920969604015	TATCAGTGGCAGTGAAT
chr11	13221651	13221652	chr11:13221652:C:T	rs11022715	C	T	C	SOX2_HMG_3	21	0	+	0	0	.
chr11	13230493	13230494	chr11:13230494:T:C	rs12795870	T	C	T	SOX2_HMG_3	-6	0	-	0	0	.
chr11	13257894	13257895	chr11:13257895:A:G	rs75606758	A	G	A	SOX2_HMG_3	-3	0	-	0	0	.
chr11	13291224	13291225	chr11:13291225:C:T	rs7104985	C	T	C	SOX2_HMG_3	-5	0	-	0	0	.
chr11	13315948	13315949	chr11:13315949:A:G	rs567938223	A	G	G	SOX2_HMG_3	12	1	-	3.21029155564317	-3.6984632236720496	GAACCATGGAAGTGAGG
chr11	13562236	13562237	chr11:13562237:G:A	rs10500786	G	A	-	SOX2_HMG_3	8	1	+	12.235552843144925	11.386508895781295	GACCAATGGTAGTGATA
chr11	13908682	13908683	chr11:13908683:C:G	rs1910391	C	G	C	SOX2_HMG_3	0	1	-	2.1069983212090118	1.3619314194976881	GATCATTGTCAGTGGCT
chr11	13920515	13920516	chr11:13920516:T:G	rs16913431	T	G	T	SOX2_HMG_3	23	0	+	0	0	.
chr11	14044938	14044939	chr11:14044939:G:A	rs10832169	G	A	A	SOX2_HMG_3	35	0	+	0	0	.
chr11	14255093	14255094	chr11:14255094:G:A	rs782117476	G	A	G	SOX2_HMG_3	30	0	+	0	0	.
chr11	14614769	14614770	chr11:14614770:T:G	rs10741651	T	G	G	SOX2_HMG_3	-5	0	-	0	0	.
chr11	15532811	15532812	chr11:15532812:A:G	rs11023623	A	G	A	SOX2_HMG_3	11	1	-	2.681144922183374	-4.011546576048973	GACCAATGTCATGGAGC
chr11	15548499	15548500	chr11:15548500:A:G	rs10766266	A	G	G	SOX2_HMG_3	-6	0	+	0	0	.
chr11	15573598	15573599	chr11:15573599:G:T	rs10832479	G	T	G	SOX2_HMG_3	19	0	+	0	0	.
chr11	15751320	15751321	chr11:15751321:T:A	rs11608200	T	A	T	SOX2_HMG_3	34	0	-	0	0	.
chr11	15800419	15800420	chr11:15800420:C:A	rs113162018	C	A	C	SOX2_HMG_3	36	0	-	0	0	.
chr11	15845328	15845329	chr11:15845329:G:T	rs144454271	G	T	G	SOX2_HMG_3	3	1	-	3.888175606342095	-3.0205791729731235	AAGCAATTGTATTTATC
chr11	15873631	15873632	chr11:15873632:G:A	rs4756835	G	A	G	SOX2_HMG_3	16	1	-	4.531401528681666	5.72817358182202	AGACAATTTAATTGTTC
chr11	16018926	16018927	chr11:16018927:G:T	rs16932458	G	T	T	SOX2_HMG_3	-7	0	+	0	0	.
chr11	16959665	16959666	chr11:16959666:A:G	rs17773381	A	G	A	SOX2_HMG_3	2	1	+	2.893622077735838	2.893622077735838	CCACAGTGGTATTGAAA
chr11	17013096	17013097	chr11:17013097:C:G	rs6486337	C	G	G	SOX2_HMG_3	-16	0	+	0	0	.
chr11	17013136	17013137	chr11:17013137:C:T	rs7950504	C	T	C	SOX2_HMG_3	24	0	+	0	0	.
chr11	17754191	17754192	chr11:17754192:C:A	rs2299637	C	A	A	SOX2_HMG_3	23	0	+	0	0	.
chr11	18063330	18063331	chr11:18063331:C:T	rs7946201	C	T	T	SOX2_HMG_3	-19	0	+	0	0	.
chr11	18255267	18255268	chr11:18255268:G:A	rs12419567	G	A	g	SOX2_HMG_3	29	0	+	0	0	.
chr11	18803122	18803123	chr11:18803123:C:G	rs4601750	C	G	C	SOX2_HMG_3	-7	0	+	0	0	.
chr11	18956953	18956954	chr11:18956954:C:A	rs12363322	C	A	-	SOX2_HMG_3	18	0	-	0	0	.
chr11	19200950	19200951	chr11:19200951:G:A	rs77820686	G	A	G	SOX2_HMG_3	-2	0	-	0	0	.
chr11	19447221	19447222	chr11:19447222:A:C	rs4756999	A	C	A	SOX2_HMG_3	29	0	-	0	0	.
chr11	19665939	19665940	chr11:19665940:A:G	rs139356958	A	G	a	SOX2_HMG_3	33	0	-	0	0	.
chr11	19899746	19899747	chr11:19899747:T:C	rs10833189	T	C	T	SOX2_HMG_3	12	1	+	8.290760893485796	1.3820061141705766	TATCATTTGTATTGATT
chr11	19933647	19933648	chr11:19933648:G:C	rs16937251	G	C	G	SOX2_HMG_3	-2	0	-	0	0	.
chr11	20008883	20008884	chr11:20008884:T:G	rs11606785	T	G	T	SOX2_HMG_3	20	0	-	0	0	.
chr11	20188849	20188850	chr11:20188850:T:C	rs12272729	T	C	T	SOX2_HMG_3	12	1	+	3.117703426828479	-3.7910513524867406	TGTGAATGACAGTGACA
chr11	20278530	20278531	chr11:20278531:T:C	rs2403580	T	C	T	SOX2_HMG_3	6	1	+	3.610214185464646	-3.2985405938505736	AAGCAATGGCTTTGTTT
chr11	20365515	20365516	chr11:20365516:A:G	rs11025535	A	G	A	SOX2_HMG_3	0	1	+	4.225986139443469	4.446580418528763	AATAAATGTTCTTGATT
chr11	20484244	20484245	chr11:20484245:A:T	rs11025581	A	T	A	SOX2_HMG_3	-5	0	-	0	0	.
chr11	20901515	20901516	chr11:20901516:C:T	rs7105313	C	T	C	SOX2_HMG_3	-13	0	+	0	0	.
chr11	20954768	20954769	chr11:20954769:G:C	rs1400378	G	C	C	SOX2_HMG_3	34	0	-	0	0	.
chr11	21476642	21476643	chr11:21476643:T:A	rs11026103	T	A	T	SOX2_HMG_3	15	1	+	2.0815385252982885	0.8466360885815665	AATCACTGTGAGTGATC
chr11	21583115	21583116	chr11:21583116:T:C	rs16908227	T	C	T	SOX2_HMG_3	18	0	-	0	0	.
chr11	21632505	21632506	chr11:21632506:C:A	rs75141547	C	A	C	SOX2_HMG_3	-20	0	-	0	0	.
chr11	21723968	21723969	chr11:21723969:G:T	rs1459877	G	T	T	SOX2_HMG_3	-19	0	-	0	0	.
chr11	21750326	21750327	chr11:21750327:T:C	rs2403680	T	C	c	SOX2_HMG_3	23	0	+	0	0	.
chr11	21964052	21964053	chr11:21964053:C:T	rs324221	C	T	.	SOX2_HMG_3	-15	0	+	0	0	.
chr11	22079278	22079279	chr11:22079279:T:C	rs967822066	T	C	T	SOX2_HMG_3	-1	0	-	0	0	.
chr11	22079289	22079290	chr11:22079290:G:C	rs140124588	G	C	G	SOX2_HMG_3	-12	0	-	0	0	.
chr11	22085268	22085269	chr11:22085269:T:C	rs10833700	T	C	C	SOX2_HMG_3	35	0	+	0	0	.
chr11	22509141	22509142	chr11:22509142:A:T	rs58261820	A	T	A	SOX2_HMG_3	33	0	+	0	0	.
chr11	22625903	22625904	chr11:22625904:C:G	rs142028189	C	G	a	SOX2_HMG_3	3	1	+	4.394978365169189	-2.513776414146033	CTGCAATGCTATTGGTC
chr11	22709358	22709359	chr11:22709359:G:A	rs400445	G	A	g	SOX2_HMG_3	-8	0	+	0	0	.
chr11	22876157	22876158	chr11:22876158:A:G	rs12284600	A	G	a	SOX2_HMG_3	-15	0	+	0	0	.
chr11	22876171	22876172	chr11:22876172:A:G	rs12284602	A	G	A	SOX2_HMG_3	-1	0	+	0	0	.
chr11	23267231	23267232	chr11:23267232:T:C	rs67449872	T	C	C	SOX2_HMG_3	33	0	+	0	0	.
chr11	23455858	23455859	chr11:23455859:T:C	rs72873504	T	C	T	SOX2_HMG_3	10	1	-	5.3802755793775265	-1.5284791999376937	GATCAAGGACATTGGTT
chr11	23875182	23875183	chr11:23875183:T:C	rs7934469	T	C	C	SOX2_HMG_3	29	0	-	0	0	.
chr11	24234619	24234620	chr11:24234620:C:G	rs2068454	C	G	G	SOX2_HMG_3	-16	0	-	0	0	.
chr11	24495890	24495891	chr11:24495891:G:A	rs117325253	G	A	G	SOX2_HMG_3	22	0	+	0	0	.
chr11	24549309	24549310	chr11:24549310:C:T	rs2403959	C	T	C	SOX2_HMG_3	-11	0	-	0	0	.
chr11	24625031	24625032	chr11:24625032:C:A	rs10767223	C	A	A	SOX2_HMG_3	8	1	-	2.6509704804104453	2.788438400275107	TGTCAATGGCATTTGGG
chr11	24635118	24635119	chr11:24635119:C:A	rs56108236	C	A	C	SOX2_HMG_3	34	0	+	0	0	.
chr11	24770572	24770573	chr11:24770573:G:C	rs2716538	G	C	G	SOX2_HMG_3	17	0	-	0	0	.
chr11	25068718	25068719	chr11:25068719:A:G	rs1374134	A	G	a	SOX2_HMG_3	5	1	+	6.739756665213028	-0.16899811410219345	TTACAATGTAATTGTTG
chr11	25163700	25163701	chr11:25163701:G:A	rs10767315	G	A	A	SOX2_HMG_3	-5	0	+	0	0	.
chr11	25674914	25674915	chr11:25674915:T:G	rs1602916	T	G	T	SOX2_HMG_3	4	1	-	4.849084124785116	-2.0596706545301044	ATTCAATTTTTTTGAAT
chr11	25798646	25798647	chr11:25798647:G:A	rs149319608	G	A	G	SOX2_HMG_3	-18	0	+	0	0	.
chr11	25928172	25928173	chr11:25928173:G:A	rs7106427	G	A	G	SOX2_HMG_3	8	1	+	3.238532042791368	2.3894880954277395	AAGCAATGGCTGTGAGT
chr11	25982234	25982235	chr11:25982235:C:T	rs184495	C	T	C	SOX2_HMG_3	-7	0	-	0	0	.
chr11	26533824	26533825	chr11:26533825:C:T	rs293941	C	T	T	SOX2_HMG_3	21	0	-	0	0	.
chr11	26533841	26533842	chr11:26533842:A:G	rs118102367	A	G	A	SOX2_HMG_3	4	1	-	3.1458918031498673	3.1458918031498673	TATCTATGTGAGTGATA
chr11	26598110	26598111	chr11:26598111:G:A	rs10835008	G	A	G	SOX2_HMG_3	-11	0	-	0	0	.
chr11	26851666	26851667	chr11:26851667:A:T	rs11819813	A	T	A	SOX2_HMG_3	3	1	-	4.0866583437095665	4.0866583437095665	AACTAATTTTATTGATT
chr11	26992484	26992485	chr11:26992485:T:C	rs7106676	T	C	C	SOX2_HMG_3	-4	0	+	0	0	.
chr11	26992507	26992508	chr11:26992508:A:C	rs754279777	A	C	A	SOX2_HMG_3	19	0	+	0	0	.
chr11	27557398	27557399	chr11:27557399:A:T	rs1013442	A	T	A	SOX2_HMG_3	-10	0	+	0	0	.
chr11	27935152	27935153	chr11:27935153:C:T	chr11:27935153:C:T	C	T	C	SOX2_HMG_3	-19	0	+	0	0	.
chr11	27935158	27935159	chr11:27935159:A:G	rs1270798049	A	G	A	SOX2_HMG_3	-13	0	+	0	0	.
chr11	28108943	28108944	chr11:28108944:G:T	rs112846910	G	T	G	SOX2_HMG_3	34	0	-	0	0	.
chr11	28111276	28111277	chr11:28111277:T:C	rs11030215	T	C	T	SOX2_HMG_3	35	0	+	0	0	.
chr11	28243709	28243710	chr11:28243710:A:G	rs138175268	A	G	A	SOX2_HMG_3	24	0	+	0	0	.
chr11	28384212	28384213	chr11:28384213:A:G	rs78049516	A	G	A	SOX2_HMG_3	32	0	-	0	0	.
chr11	28384223	28384224	chr11:28384224:G:C	rs7116476	G	C	G	SOX2_HMG_3	21	0	-	0	0	.
chr11	28648346	28648347	chr11:28648347:A:G	rs146037452	A	G	A	SOX2_HMG_3	8	1	-	3.38916555981099	2.5174292071751267	GATTAATATAATTGGTG
chr11	28739542	28739543	chr11:28739543:G:A	rs72887575	G	A	G	SOX2_HMG_3	-4	0	-	0	0	.
chr11	28757098	28757099	chr11:28757099:A:T	rs55875836	A	T	A	SOX2_HMG_3	36	0	+	0	0	.
chr11	28837064	28837065	chr11:28837065:T:C	rs9633860	T	C	C	SOX2_HMG_3	19	0	-	0	0	.
chr11	28838874	28838875	chr11:28838875:A:T	rs61888343	A	T	A	SOX2_HMG_3	10	1	+	6.113537784180686	-0.7952169951345345	AATAAATACCAGTGATG
chr11	28963411	28963412	chr11:28963412:G:C	rs2959142	G	C	.	SOX2_HMG_3	-19	0	+	0	0	.
chr11	29125553	29125554	chr11:29125554:T:C	rs6484426	T	C	T	SOX2_HMG_3	29	0	-	0	0	.
chr11	29162660	29162661	chr11:29162661:T:C	rs79915734	T	C	T	SOX2_HMG_3	-6	0	-	0	0	.
chr11	30206375	30206376	chr11:30206376:A:T	rs655183	A	T	A	SOX2_HMG_3	12	1	-	7.774844464743888	0.8660896854286677	CATCACTGATAGTGAAG
chr11	30458586	30458587	chr11:30458587:A:G	rs581277	A	G	G	SOX2_HMG_3	-13	0	+	0	0	.
chr11	30547163	30547164	chr11:30547164:A:G	rs12289767	A	G	G	SOX2_HMG_3	-2	0	+	0	0	.
chr11	30547184	30547185	chr11:30547185:C:T	rs12276680	C	T	T	SOX2_HMG_3	19	0	+	0	0	.
chr11	30637868	30637869	chr11:30637869:C:T	rs12295347	C	T	C	SOX2_HMG_3	33	0	-	0	0	.
chr11	30694138	30694139	chr11:30694139:T:C	rs61886037	T	C	T	SOX2_HMG_3	-6	0	+	0	0	.
chr11	30716031	30716032	chr11:30716032:G:A	rs292435	G	A	A	SOX2_HMG_3	9	1	-	1.6535304005665727	2.4602005345036186	GATCAAGGGCAGGGAAG
chr11	30919735	30919736	chr11:30919736:T:C	rs273607	T	C	T	SOX2_HMG_3	36	0	-	0	0	.
chr11	31877338	31877339	chr11:31877339:T:C	rs11031506	T	C	T	SOX2_HMG_3	4	1	-	1.6144720673741375	-5.294282711941081	AATCAGAGGCATTGAGT
chr11	31986836	31986837	chr11:31986837:G:A	rs224685	G	A	g	SOX2_HMG_3	23	0	-	0	0	.
chr11	32052034	32052035	chr11:32052035:T:A	rs2745876	T	A	A	SOX2_HMG_3	27	0	-	0	0	.
chr11	32069691	32069692	chr11:32069692:T:C	rs224608	T	C	C	SOX2_HMG_3	2	1	-	6.280614216852358	6.280614216852358	AAACAATGATATTTATT
chr11	32109338	32109339	chr11:32109339:C:T	rs142333054	C	T	C	SOX2_HMG_3	9	1	+	7.1327578160061424	7.939427949943189	AGGCAATGACATTGTAA
chr11	32121458	32121459	chr11:32121459:T:C	rs11031600	T	C	T	SOX2_HMG_3	-20	0	+	0	0	.
chr11	32526731	32526732	chr11:32526732:T:C	rs7950535	T	C	T	SOX2_HMG_3	31	0	-	0	0	.
chr11	33011880	33011881	chr11:33011881:T:C	rs12275192	T	C	C	SOX2_HMG_3	-6	0	+	0	0	.
chr11	33064785	33064786	chr11:33064786:G:T	rs12221857	G	T	G	SOX2_HMG_3	-11	0	-	0	0	.
chr11	33203315	33203316	chr11:33203316:T:C	rs1842499	T	C	C	SOX2_HMG_3	-11	0	+	0	0	.
chr11	33808568	33808569	chr11:33808569:C:T	rs7950864	C	T	C	SOX2_HMG_3	-4	0	-	0	0	.
chr11	34047286	34047287	chr11:34047287:G:A	rs73486549	G	A	G	SOX2_HMG_3	13	1	+	3.1466621721455463	-3.762092607169674	AGACATTGCTAGTGATT
chr11	34150833	34150834	chr11:34150834:G:C	rs3763971	G	C	g	SOX2_HMG_3	-7	0	+	0	0	.
chr11	34363918	34363919	chr11:34363919:T:G	rs1460324892	T	G	T	SOX2_HMG_3	14	1	-	5.689870120113982	-1.142428585452711	AAGCAATGCTTTTGAAA
chr11	34371562	34371563	chr11:34371563:T:C	rs76369321	T	C	T	SOX2_HMG_3	34	0	+	0	0	.
chr11	34445942	34445943	chr11:34445943:T:C	rs482322	T	C	C	SOX2_HMG_3	4	1	-	7.429776024142296	0.5210212448270743	GATCAATATTATTAATC
chr11	34604488	34604489	chr11:34604489:A:G	rs137957325	A	G	A	SOX2_HMG_3	2	1	-	2.676348453118747	-2.327023617196841	CATTAAAGGTAGTGATA
chr11	34604504	34604505	chr11:34604505:C:T	rs10836264	C	T	C	SOX2_HMG_3	-14	0	-	0	0	.
chr11	34692904	34692905	chr11:34692905:A:G	rs437952	A	G	G	SOX2_HMG_3	6	1	-	3.9560994442900315	-2.952655335025189	TATCTATGGTATAGATA
chr11	34836286	34836287	chr11:34836287:A:G	rs731727	A	G	G	SOX2_HMG_3	-6	0	-	0	0	.
chr11	34855775	34855776	chr11:34855776:C:T	rs138768880	C	T	C	SOX2_HMG_3	33	0	+	0	0	.
chr11	34890741	34890742	chr11:34890742:T:A	rs2915224	T	A	A	SOX2_HMG_3	29	0	+	0	0	.
chr11	34941911	34941912	chr11:34941912:T:C	rs11032942	T	C	T	SOX2_HMG_3	33	0	-	0	0	.
chr11	34941926	34941927	chr11:34941927:T:C	rs978010197	T	C	T	SOX2_HMG_3	18	0	-	0	0	.
chr11	34977936	34977937	chr11:34977937:G:T	rs733567	G	T	T	SOX2_HMG_3	13	1	+	5.598128434063004	-1.3106263452522162	GGTTAATATTATTGATC
chr11	34985160	34985161	chr11:34985161:G:A	rs2253128	G	A	G	SOX2_HMG_3	-19	0	-	0	0	.
chr11	35047047	35047048	chr11:35047048:A:G	rs563528273	A	G	A	SOX2_HMG_3	-14	0	+	0	0	.
chr11	35047058	35047059	chr11:35047059:C:G	rs2785155	C	G	C	SOX2_HMG_3	-3	0	+	0	0	.
chr11	35088127	35088128	chr11:35088128:G:A	rs1365057	G	A	G	SOX2_HMG_3	27	0	-	0	0	.
chr11	35153497	35153498	chr11:35153498:T:C	rs353618	T	C	T	SOX2_HMG_3	-17	0	+	0	0	.
chr11	35190740	35190741	chr11:35190741:A:G	rs7930724	A	G	G	SOX2_HMG_3	-3	0	-	0	0	.
chr11	35223095	35223096	chr11:35223096:C:A	rs11033031	C	A	C	SOX2_HMG_3	8	1	-	7.996139349130602	8.133607268995267	CCTCAATGGTATAGATA
chr11	35268209	35268210	chr11:35268210:C:T	rs10444271	C	T	C	SOX2_HMG_3	-6	0	-	0	0	.
chr11	35337962	35337963	chr11:35337963:A:G	rs7927023	A	G	A	SOX2_HMG_3	-17	0	-	0	0	.
chr11	35352303	35352304	chr11:35352304:T:C	rs7127824	T	C	C	SOX2_HMG_3	-6	0	+	0	0	.
chr11	35352326	35352327	chr11:35352327:G:T	rs7111949	G	T	G	SOX2_HMG_3	17	0	+	0	0	.
chr11	35530462	35530463	chr11:35530463:A:G	rs598515	A	G	A	SOX2_HMG_3	32	0	+	0	0	.
chr11	35736120	35736121	chr11:35736121:G:A	rs11033261	G	A	G	SOX2_HMG_3	-8	0	-	0	0	.
chr11	35905244	35905245	chr11:35905245:A:G	rs1512787	A	G	G	SOX2_HMG_3	32	0	+	0	0	.
chr11	36196952	36196953	chr11:36196953:A:T	rs3812770	A	T	T	SOX2_HMG_3	12	1	-	8.566718733508115	1.657963954192895	GACCAATGAAAGTGAAG
chr11	36196984	36196985	chr11:36196985:T:G	rs3812769	T	G	T	SOX2_HMG_3	-20	0	-	0	0	.
chr11	36267012	36267013	chr11:36267013:C:T	rs34700060	C	T	C	SOX2_HMG_3	-11	0	+	0	0	.
chr11	36425879	36425880	chr11:36425880:C:A	rs754005	C	A	C	SOX2_HMG_3	17	0	-	0	0	.
chr11	36455411	36455412	chr11:36455412:A:G	rs16928896	A	G	A	SOX2_HMG_3	5	1	+	7.024946305334403	0.11619152601918253	GATGAATGCCAGTGAAT
chr11	36520568	36520569	chr11:36520569:G:A	rs10742375	G	A	G	SOX2_HMG_3	-18	0	+	0	0	.
chr11	36754023	36754024	chr11:36754024:G:A	rs115496704	G	A	G	SOX2_HMG_3	-12	0	+	0	0	.
chr11	36774741	36774742	chr11:36774742:T:C	rs12290480	T	C	T	SOX2_HMG_3	-5	0	+	0	0	.
chr11	37394986	37394987	chr11:37394987:C:T	rs79359778	C	T	C	SOX2_HMG_3	24	0	+	0	0	.
chr11	37605156	37605157	chr11:37605157:G:A	rs7932799	G	A	A	SOX2_HMG_3	-15	0	+	0	0	.
chr11	37916484	37916485	chr11:37916485:C:G	rs76547434	C	G	C	SOX2_HMG_3	33	0	+	0	0	.
chr11	38005892	38005893	chr11:38005893:G:A	rs7108868	G	A	A	SOX2_HMG_3	25	0	-	0	0	.
chr11	38461620	38461621	chr11:38461621:A:G	rs11603512	A	G	A	SOX2_HMG_3	6	1	-	6.350479170735853	-0.5582756085793672	CATCTATGTTAGTGACT
chr11	38937724	38937725	chr11:38937725:A:G	rs6485041	A	G	A	SOX2_HMG_3	-3	0	+	0	0	.
chr11	39012004	39012005	chr11:39012005:A:G	rs1461630	A	G	A	SOX2_HMG_3	34	0	-	0	0	.
chr11	39306974	39306975	chr11:39306975:C:T	rs2088544	C	T	C	SOX2_HMG_3	-18	0	-	0	0	.
chr11	40265722	40265723	chr11:40265723:C:T	rs72891085	C	T	C	SOX2_HMG_3	-2	0	-	0	0	.
chr11	40438018	40438019	chr11:40438019:A:G	rs10837410	A	G	A	SOX2_HMG_3	-9	0	+	0	0	.
chr11	40770938	40770939	chr11:40770939:A:T	rs11036069	A	T	A	SOX2_HMG_3	-1	0	-	0	0	.
chr11	40787618	40787619	chr11:40787619:G:C	rs56414142	G	C	G	SOX2_HMG_3	5	1	+	3.762977275025179	3.762977275025179	TATCAGTATAAGTGAAA
chr11	40987552	40987553	chr11:40987553:C:T	rs34673145	C	T	C	SOX2_HMG_3	25	0	-	0	0	.
chr11	41044555	41044556	chr11:41044556:A:G	rs355219	A	G	G	SOX2_HMG_3	-13	0	+	0	0	.
chr11	41246662	41246663	chr11:41246663:C:T	rs559483811	C	T	C	SOX2_HMG_3	16	1	-	4.042544713991369	3.7688570976010967	AATACATGATATTGATG
chr11	41996799	41996800	chr11:41996800:C:A	rs138058965	C	A	C	SOX2_HMG_3	34	0	-	0	0	.
chr11	41996812	41996813	chr11:41996813:G:A	rs1514816	G	A	G	SOX2_HMG_3	21	0	-	0	0	.
chr11	42415360	42415361	chr11:42415361:T:C	rs11602641	T	C	T	SOX2_HMG_3	6	1	+	6.225255402603334	-0.6834993767118858	TCTCAATTTTATAGATG
chr11	42498922	42498923	chr11:42498923:T:A	rs1462663	T	A	T	SOX2_HMG_3	-10	0	-	0	0	.
chr11	42762289	42762290	chr11:42762290:C:T	rs7930627	C	T	T	SOX2_HMG_3	18	0	-	0	0	.
chr11	43378733	43378734	chr11:43378734:C:T	rs17508618	C	T	C	SOX2_HMG_3	-12	0	-	0	0	.
chr11	43573480	43573481	chr11:43573481:A:C	rs4755200	A	C	A	SOX2_HMG_3	15	1	+	4.459635925283883	2.8518292058237473	GAGCAAAGACATTGAAT
chr11	43908753	43908754	chr11:43908754:C:T	rs11603980	C	T	C	SOX2_HMG_3	35	0	-	0	0	.
chr11	44019283	44019284	chr11:44019284:C:A	rs7117014	C	A	A	SOX2_HMG_3	-10	0	+	0	0	.
chr11	44036063	44036064	chr11:44036064:C:T	rs10838228	C	T	C	SOX2_HMG_3	3	1	+	3.1878314597787276	-3.7209233195364937	CTGCAATGTAAGTGGTT
chr11	44411366	44411367	chr11:44411367:A:G	rs12786821	A	G	G	SOX2_HMG_3	30	0	-	0	0	.
chr11	44554712	44554713	chr11:44554713:A:G	rs1991550	A	G	A	SOX2_HMG_3	0	1	+	2.9856211188109665	3.20621539789626	ATGCAATGGTATTAAGA
chr11	44564983	44564984	chr11:44564984:G:A	rs978812942	G	A	G	SOX2_HMG_3	-6	0	+	0	0	.
chr11	44654702	44654703	chr11:44654703:A:T	rs7925013	A	T	T	SOX2_HMG_3	-13	0	-	0	0	.
chr11	44817559	44817560	chr11:44817560:A:G	rs16938088	A	G	A	SOX2_HMG_3	10	1	-	3.9797658871277948	3.9797658871277948	GGTCAATTGCTGTGAGA
chr11	44822545	44822546	chr11:44822546:C:T	rs2863121	C	T	C	SOX2_HMG_3	32	0	+	0	0	.
chr11	44893796	44893797	chr11:44893797:C:T	rs11038187	C	T	C	SOX2_HMG_3	32	0	+	0	0	.
chr11	44893986	44893987	chr11:44893987:C:T	rs76747140	C	T	C	SOX2_HMG_3	27	0	-	0	0	.
chr11	45044570	45044571	chr11:45044571:T:G	rs76846565	T	G	G	SOX2_HMG_3	6	1	-	5.934006995316333	5.934006995316333	GATCAAAAGTAGTGAGA
chr11	45044571	45044572	chr11:45044572:T:C	rs75200870	T	C	C	SOX2_HMG_3	5	1	-	5.934006995316333	-0.9747477839988881	GATCAAAAGTAGTGAGA
chr11	45097629	45097630	chr11:45097630:A:C	rs747614	A	C	C	SOX2_HMG_3	9	1	-	5.007058583665234	-1.4322917874348633	AAAAAATGGTAGTGAAA
chr11	45140954	45140955	chr11:45140955:A:C	rs73464580	A	C	t	SOX2_HMG_3	-1	0	-	0	0	.
chr11	45284874	45284875	chr11:45284875:C:T	rs74958363	C	T	C	SOX2_HMG_3	11	1	+	4.141138977195885	10.833830475428233	TGTCAATGTCACTGTTC
chr11	45318445	45318446	chr11:45318446:G:C	rs4755965	G	C	C	SOX2_HMG_3	1	1	-	3.7404858873095996	4.914882149753624	GCTCTATTTAATTGAAA
chr11	45318448	45318449	chr11:45318449:C:T	rs4755966	C	T	T	SOX2_HMG_3	-2	0	-	0	0	.
chr11	46159539	46159540	chr11:46159540:C:G	rs9300054	C	G	G	SOX2_HMG_3	30	0	+	0	0	.
chr11	47281723	47281724	chr11:47281724:T:C	rs326217	T	C	T	SOX2_HMG_3	12	1	+	3.776509185874794	-3.1322455934404254	CATCTATGGCAATGATG
chr11	47410151	47410152	chr11:47410152:A:G	rs61897432	A	G	A	SOX2_HMG_3	12	1	-	2.430549173573561	-4.478205605741659	GGGCAAGGGCAGTGAGG
chr11	47773249	47773250	chr11:47773250:C:T	rs10838763	C	T	C	SOX2_HMG_3	-9	0	+	0	0	.
chr11	47795737	47795738	chr11:47795738:A:G	rs2904127	A	G	A	SOX2_HMG_3	1	1	+	2.325682409891199	0.49403481981190667	TATCAATGTCATCAAAG
chr11	47982371	47982372	chr11:47982372:A:G	rs72899720	A	G	A	SOX2_HMG_3	5	1	+	5.545856947694617	-1.3628978316206044	GCCCAATGGAATTGTTT
chr11	48088240	48088241	chr11:48088241:G:A	rs7479361	G	A	G	SOX2_HMG_3	-7	0	-	0	0	.
chr11	48127902	48127903	chr11:48127903:A:G	rs907737329	A	G	A	SOX2_HMG_3	-16	0	+	0	0	.
chr11	55281971	55281972	chr11:55281972:C:G	rs2867259	C	G	c	SOX2_HMG_3	19	0	+	0	0	.
chr11	57547687	57547688	chr11:57547688:C:T	rs1172189948	C	T	C	SOX2_HMG_3	-5	0	+	0	0	.
chr11	57776188	57776189	chr11:57776189:A:G	rs67812265	A	G	A	SOX2_HMG_3	0	1	+	5.453538885813577	5.674133164898871	AGTCAATTGTATTAAGT
chr11	57776220	57776221	chr11:57776221:G:C	rs932617289	G	C	G	SOX2_HMG_3	32	0	+	0	0	.
chr11	57979929	57979930	chr11:57979930:C:T	rs10792121	C	T	C	SOX2_HMG_3	-17	0	+	0	0	.
chr11	58104008	58104009	chr11:58104009:C:G	rs61904054	C	G	C	SOX2_HMG_3	-1	0	-	0	0	.
chr11	58641396	58641397	chr11:58641397:A:G	rs11229556	A	G	A	SOX2_HMG_3	4	1	+	4.815446437138128	-2.0933083421770924	TTTCAATAGAAGTGTAA
chr11	58676327	58676328	chr11:58676328:A:G	rs491005	A	G	A	SOX2_HMG_3	13	1	+	2.5079474767458985	9.41670225606112	GGTCAATGATATTACTG
chr11	59025604	59025605	chr11:59025605:A:G	rs11229741	A	G	.	SOX2_HMG_3	30	0	+	0	0	.
chr11	59556507	59556508	chr11:59556508:G:A	rs7952380	G	A	.	SOX2_HMG_3	24	0	-	0	0	.
chr11	59556546	59556547	chr11:59556547:A:C	rs2298869	A	C	.	SOX2_HMG_3	-15	0	-	0	0	.
chr11	59605842	59605843	chr11:59605843:T:C	rs114970362	T	C	T	SOX2_HMG_3	-10	0	-	0	0	.
chr11	60004012	60004013	chr11:60004013:C:A	rs481065	C	A	C	SOX2_HMG_3	-20	0	-	0	0	.
chr11	60156034	60156035	chr11:60156035:A:G	rs983392	A	G	.	SOX2_HMG_3	0	1	+	5.980520666384191	6.2011149454694845	ATGCAATTTTATTGTAG
chr11	60285825	60285826	chr11:60285826:T:G	rs1025939574	T	G	t	SOX2_HMG_3	33	0	-	0	0	.
chr11	60364690	60364691	chr11:60364691:G:A	rs7952244	G	A	G	SOX2_HMG_3	31	0	-	0	0	.
chr11	60389010	60389011	chr11:60389011:G:A	rs12793970	G	A	G	SOX2_HMG_3	36	0	+	0	0	.
chr11	60803515	60803516	chr11:60803516:G:C	rs114905057	G	C	G	SOX2_HMG_3	32	0	+	0	0	.
chr11	60843064	60843065	chr11:60843065:G:A	rs12278325	G	A	G	SOX2_HMG_3	-16	0	+	0	0	.
chr11	61046910	61046911	chr11:61046911:A:G	rs175103	A	G	G	SOX2_HMG_3	4	1	+	5.352722810492236	-1.5560319688229856	GCTCAATGTAATTTAGA
chr11	61071568	61071569	chr11:61071569:C:T	rs112975826	C	T	C	SOX2_HMG_3	-7	0	-	0	0	.
chr11	61678879	61678880	chr11:61678880:A:G	rs4963304	A	G	G	SOX2_HMG_3	-19	0	+	0	0	.
chr11	61971669	61971670	chr11:61971670:G:C	rs57398279	G	C	g	SOX2_HMG_3	26	0	+	0	0	.
chr11	62044329	62044330	chr11:62044330:T:G	rs259873	T	G	T	SOX2_HMG_3	26	0	+	0	0	.
chr11	62049658	62049659	chr11:62049659:T:C	rs259884	T	C	C	SOX2_HMG_3	-19	0	+	0	0	.
chr11	62058266	62058267	chr11:62058267:G:A	rs7926212	G	A	G	SOX2_HMG_3	12	1	-	3.9885091472625804	10.897263926577802	GAGCAATGGCAGCGAGA
chr11	62058293	62058294	chr11:62058294:C:T	rs12577010	C	T	C	SOX2_HMG_3	-15	0	-	0	0	.
chr11	62126557	62126558	chr11:62126558:A:G	rs12362624	A	G	A	SOX2_HMG_3	-11	0	-	0	0	.
chr11	62126560	62126561	chr11:62126561:T:C	rs7927359	T	C	C	SOX2_HMG_3	-14	0	-	0	0	.
chr11	62203654	62203655	chr11:62203655:G:A	rs72915236	G	A	G	SOX2_HMG_3	-16	0	-	0	0	.
chr11	62965906	62965907	chr11:62965907:G:T	rs10897309	G	T	T	SOX2_HMG_3	-4	0	-	0	0	.
chr11	63666542	63666543	chr11:63666543:C:T	rs4963426	C	T	C	SOX2_HMG_3	16	1	-	3.6932430953511015	3.41955547896083	GACCCATTTTAGTGATG
chr11	64135134	64135135	chr11:64135135:T:C	rs772300086	T	C	T	SOX2_HMG_3	-16	0	-	0	0	.
chr11	64477603	64477604	chr11:64477604:C:T	rs652922	C	T	C	SOX2_HMG_3	0	1	+	4.105013227705983	3.967684249657319	CCTCGATGGCAGTGAGA
chr11	64477607	64477608	chr11:64477608:G:A	rs652934	G	A	G	SOX2_HMG_3	4	1	+	4.105013227705983	11.013768007021204	CCTCGATGGCAGTGAGA
chr11	64862247	64862248	chr11:64862248:A:G	rs4930685	A	G	G	SOX2_HMG_3	-14	0	+	0	0	.
chr11	64917312	64917313	chr11:64917313:A:G	chr11:64917313:A:G	A	G	A	SOX2_HMG_3	-14	0	-	0	0	.
chr11	64930477	64930478	chr11:64930478:C:T	rs111934356	C	T	C	SOX2_HMG_3	22	0	-	0	0	.
chr11	65137436	65137437	chr11:65137437:C:T	rs10895987	C	T	C	SOX2_HMG_3	-20	0	-	0	0	.
chr11	65861427	65861428	chr11:65861428:C:T	rs34381357	C	T	C	SOX2_HMG_3	3	1	+	3.644432411325054	-3.2643223679901654	CTTCCATGCCAGTGAGG
chr11	65911199	65911200	chr11:65911200:G:T	rs76214078	G	T	G	SOX2_HMG_3	-4	0	+	0	0	.
chr11	66201619	66201620	chr11:66201620:T:C	rs72936656	T	C	T	SOX2_HMG_3	11	1	+	7.584134098252866	0.8914426000205187	AATAAATGAAATTGAAA
chr11	66214374	66214375	chr11:66214375:C:T	rs3016319	C	T	C	SOX2_HMG_3	9	1	+	2.1954116570255477	3.0020817909625936	CCTCATTGCCAGTGACA
chr11	66246828	66246829	chr11:66246829:C:T	rs2155198	C	T	C	SOX2_HMG_3	-14	0	-	0	0	.
chr11	67268712	67268713	chr11:67268713:C:A	rs61758508	C	A	C	SOX2_HMG_3	-9	0	+	0	0	.
chr11	67634683	67634684	chr11:67634684:G:A	rs115175343	G	A	G	SOX2_HMG_3	35	0	-	0	0	.
chr11	67715005	67715006	chr11:67715006:A:G	rs6591280	A	G	-	SOX2_HMG_3	-17	0	-	0	0	.
chr11	68027534	68027535	chr11:68027535:C:T	rs308342	C	T	T	SOX2_HMG_3	-7	0	-	0	0	.
chr11	68037339	68037340	chr11:68037340:G:A	rs4147779	G	A	G	SOX2_HMG_3	16	1	+	2.3339903393627184	2.0603027229724473	CTTCATTTGCAGTGAGG
chr11	68340863	68340864	chr11:68340864:T:C	rs312778	T	C	C	SOX2_HMG_3	36	0	-	0	0	.
chr11	68343204	68343205	chr11:68343205:C:T	rs75696335	C	T	C	SOX2_HMG_3	-6	0	+	0	0	.
chr11	68370280	68370281	chr11:68370281:T:C	rs139048239	T	C	T	SOX2_HMG_3	-13	0	-	0	0	.
chr11	68760065	68760066	chr11:68760066:C:T	rs117844102	C	T	C	SOX2_HMG_3	26	0	-	0	0	.
chr11	69066567	69066568	chr11:69066568:C:A	rs61887953	C	A	C	SOX2_HMG_3	17	0	+	0	0	.
chr11	69229229	69229230	chr11:69229230:C:T	rs61881114	C	T	C	SOX2_HMG_3	-16	0	+	0	0	.
chr11	69250938	69250939	chr11:69250939:G:A	chr11:69250939:G:A	G	A	G	SOX2_HMG_3	7	1	+	2.6527236302077344	-0.07606349035360022	CGTCCATGGAAGTGTTT
chr11	69283338	69283339	chr11:69283339:T:C	rs773287404	T	C	T	SOX2_HMG_3	22	0	-	0	0	.
chr11	69335355	69335356	chr11:69335356:G:A	rs75100465	G	A	G	SOX2_HMG_3	24	0	+	0	0	.
chr11	69383218	69383219	chr11:69383219:T:A	rs12146485	T	A	T	SOX2_HMG_3	-14	0	-	0	0	.
chr11	69403509	69403510	chr11:69403510:G:A	rs4980777	G	A	G	SOX2_HMG_3	17	0	+	0	0	.
chr11	69558559	69558560	chr11:69558560:C:T	rs78078215	C	T	C	SOX2_HMG_3	13	1	-	1.760222199410452	-5.148532579904767	GCTCGATGACAGTGGTG
chr11	69712261	69712262	chr11:69712262:T:C	rs1448627580	T	C	t	SOX2_HMG_3	-16	0	-	0	0	.
chr11	69993210	69993211	chr11:69993211:C:G	rs4980708	C	G	C	SOX2_HMG_3	11	1	-	6.20561758418509	0.9300060551726921	TATCAAGGGTAGTGTTT
chr11	70000733	70000734	chr11:70000734:G:A	rs2015411	G	A	G	SOX2_HMG_3	-11	0	-	0	0	.
chr11	70074178	70074179	chr11:70074179:C:T	rs367928486	C	T	C	SOX2_HMG_3	19	0	-	0	0	.
chr11	70467640	70467641	chr11:70467641:T:C	rs188775855	T	C	T	SOX2_HMG_3	11	1	+	4.042544713991369	-2.6501467842409796	AATGATTGATATTGATG
chr11	70590283	70590284	chr11:70590284:T:C	rs11236757	T	C	T	SOX2_HMG_3	17	0	+	0	0	.
chr11	70627323	70627324	chr11:70627324:A:G	rs78971150	A	G	A	SOX2_HMG_3	-5	0	-	0	0	.
chr11	71131729	71131730	chr11:71131730:A:G	rs11232176	A	G	A	SOX2_HMG_3	5	1	+	5.245075188053281	-1.6636795912619395	AATAAATTGAAGTGAAG
chr11	71131752	71131753	chr11:71131753:T:C	rs73523005	T	C	T	SOX2_HMG_3	28	0	+	0	0	.
chr11	71410442	71410443	chr11:71410443:A:G	rs58906324	A	G	A	SOX2_HMG_3	-7	0	-	0	0	.
chr11	71410607	71410608	chr11:71410608:T:C	rs12285140	T	C	c	SOX2_HMG_3	24	0	+	0	0	.
chr11	71410827	71410828	chr11:71410828:A:C	rs111989006	A	C	A	SOX2_HMG_3	-20	0	+	0	0	.
chr11	71455290	71455291	chr11:71455291:A:G	rs1790373	A	G	G	SOX2_HMG_3	-12	0	+	0	0	.
chr11	71749105	71749106	chr11:71749106:A:T	rs3206889	A	T	-	SOX2_HMG_3	14	1	-	4.611509467774982	7.324283312589277	GGTTAATATTATTGTTA
chr11	71804640	71804641	chr11:71804641:C:T	rs61301176	C	T	-	SOX2_HMG_3	32	0	-	0	0	.
chr11	71940914	71940915	chr11:71940915:G:C	rs2187496	G	C	G	SOX2_HMG_3	24	0	+	0	0	.
chr11	72132652	72132653	chr11:72132653:G:A	rs12293195	G	A	G	SOX2_HMG_3	16	1	+	2.777990916344587	2.5043032999543158	AGACAAAGACATTGAGG
chr11	73198826	73198827	chr11:73198827:C:A	rs12289180	C	A	C	SOX2_HMG_3	10	1	-	1.9754038817193638	1.9754038817193638	TATCAATGGTGATGAGT
chr11	73198841	73198842	chr11:73198842:G:T	rs12275582	G	T	G	SOX2_HMG_3	-5	0	-	0	0	.
chr11	73249748	73249749	chr11:73249749:T:G	rs1341593581	T	G	T	SOX2_HMG_3	19	0	+	0	0	.
chr11	73967899	73967900	chr11:73967900:T:C	rs4944871	T	C	C	SOX2_HMG_3	6	1	+	3.721555943650004	-3.1871988356652166	ATTCACTGTCAGTGTTA
chr11	74074280	74074281	chr11:74074281:T:C	rs4453265	T	C	T	SOX2_HMG_3	-5	0	-	0	0	.
chr11	74264760	74264761	chr11:74264761:G:A	rs79599822	G	A	G	SOX2_HMG_3	9	1	-	6.890194937357796	7.696865071294843	ATTCAGTGTCATTGAAG
chr11	74399496	74399497	chr11:74399497:T:C	rs676103	T	C	T	SOX2_HMG_3	36	0	+	0	0	.
chr11	74535963	74535964	chr11:74535964:G:C	rs598395	G	C	C	SOX2_HMG_3	14	1	-	2.759130434932119	5.409551523197693	CATCAATGTTAATGCAT
chr11	74565225	74565226	chr11:74565226:C:T	rs7116713	C	T	C	SOX2_HMG_3	27	0	-	0	0	.
chr11	74616946	74616947	chr11:74616947:A:G	rs12807883	A	G	A	SOX2_HMG_3	2	1	-	4.176620573792996	-0.8267514965225917	AGTGAATGAAAGTGAGG
chr11	75236970	75236971	chr11:75236971:G:C	rs114625440	G	C	G	SOX2_HMG_3	18	0	-	0	0	.
chr11	75291628	75291629	chr11:75291629:G:C	rs745373	G	C	C	SOX2_HMG_3	-14	0	+	0	0	.
chr11	75328927	75328928	chr11:75328928:C:T	rs148261905	C	T	T	SOX2_HMG_3	-11	0	-	0	0	.
chr11	75381766	75381767	chr11:75381767:G:A	rs34113413	G	A	G	SOX2_HMG_3	-7	0	-	0	0	.
chr11	75447822	75447823	chr11:75447823:T:G	rs547844	T	G	T	SOX2_HMG_3	20	0	-	0	0	.
chr11	75651482	75651483	chr11:75651483:G:T	rs3862804	G	T	T	SOX2_HMG_3	32	0	-	0	0	.
chr11	75967126	75967127	chr11:75967127:G:T	rs114942168	G	T	G	SOX2_HMG_3	3	1	-	2.614745220893025	-4.2940095584221964	GATCAATGGCAGGCATA
chr11	76124338	76124339	chr11:76124339:C:T	rs17134579	C	T	T	SOX2_HMG_3	-11	0	-	0	0	.
chr11	76288191	76288192	chr11:76288192:T:A	rs12290788	T	A	T	SOX2_HMG_3	8	1	+	4.087071363357092	3.100559496128801	CAGCAATGTCAGGGAAG
chr11	76288205	76288206	chr11:76288206:C:T	rs905992028	C	T	C	SOX2_HMG_3	22	0	+	0	0	.
chr11	76564658	76564659	chr11:76564659:T:C	rs12789493	T	C	C	SOX2_HMG_3	9	1	+	6.075083730298892	5.268413596361847	AAACAATTATAGTGGTA
chr11	76636089	76636090	chr11:76636090:G:A	rs117930687	G	A	G	SOX2_HMG_3	-18	0	+	0	0	.
chr11	76636122	76636123	chr11:76636123:G:T	rs11600548	G	T	G	SOX2_HMG_3	15	1	+	2.1949110301569785	3.8622870484246015	CATTAATGCCAGTGGGA
chr11	76650174	76650175	chr11:76650175:G:A	rs145753653	G	A	G	SOX2_HMG_3	20	0	+	0	0	.
chr11	76650190	76650191	chr11:76650191:T:C	rs114382639	T	C	T	SOX2_HMG_3	36	0	+	0	0	.
chr11	76863666	76863667	chr11:76863667:A:G	rs7942646	A	G	A	SOX2_HMG_3	-4	0	-	0	0	.
chr11	76877613	76877614	chr11:76877614:T:C	rs9666315	T	C	C	SOX2_HMG_3	-13	0	-	0	0	.
chr11	76903420	76903421	chr11:76903421:T:C	rs1025815	T	C	C	SOX2_HMG_3	-6	0	-	0	0	.
chr11	77111601	77111602	chr11:77111602:T:G	rs7951856	T	G	T	SOX2_HMG_3	24	0	+	0	0	.
chr11	77174032	77174033	chr11:77174033:C:G	rs10899355	C	G	G	SOX2_HMG_3	24	0	-	0	0	.
chr11	77463582	77463583	chr11:77463583:A:G	rs3015991	A	G	G	SOX2_HMG_3	15	1	-	3.3145196872217104	0.4718105310448526	GCTCTATTTCATTGTTA
chr11	77724785	77724786	chr11:77724786:G:A	rs567814	G	A	G	SOX2_HMG_3	9	1	-	6.810726155393952	7.617396289330997	GATCAATGGCGGTGTTA
chr11	78118248	78118249	chr11:78118249:T:C	rs7115416	T	C	C	SOX2_HMG_3	10	1	-	4.731115472343633	-2.177639306971587	TAACTATGATAGTGATA
chr11	78325478	78325479	chr11:78325479:G:A	rs114650129	G	A	G	SOX2_HMG_3	29	0	-	0	0	.
chr11	78428232	78428233	chr11:78428233:C:T	rs1355921	C	T	T	SOX2_HMG_3	9	1	+	4.212915484519284	5.019585618456331	ACTAAATGACAGTGAAA
chr11	78534287	78534288	chr11:78534288:G:T	rs4945289	G	T	G	SOX2_HMG_3	-4	0	+	0	0	.
chr11	79018789	79018790	chr11:79018790:C:T	rs12785810	C	T	C	SOX2_HMG_3	7	1	-	3.8084735442069326	1.0796864236455972	AAAAAATGTCAGTGAAT
chr11	79437968	79437969	chr11:79437969:G:A	rs7116789	G	A	G	SOX2_HMG_3	-3	0	-	0	0	.
chr11	79462037	79462038	chr11:79462038:C:T	rs1912702	C	T	T	SOX2_HMG_3	0	1	-	3.836828117878025	3.6162338387927315	GTTAAATGAAATTGAGT
chr11	79564572	79564573	chr11:79564573:G:A	rs12364768	G	A	G	SOX2_HMG_3	-17	0	-	0	0	.
chr11	79905228	79905229	chr11:79905229:G:A	rs17139061	G	A	G	SOX2_HMG_3	28	0	+	0	0	.
chr11	79982347	79982348	chr11:79982348:T:G	rs493589	T	G	T	SOX2_HMG_3	12	1	+	3.439435232189967	-3.4693195471252536	AGACAATGGAATTCATT
chr11	80030870	80030871	chr11:80030871:C:T	rs1938874	C	T	C	SOX2_HMG_3	-6	0	+	0	0	.
chr11	80099186	80099187	chr11:80099187:C:A	rs140967147	C	A	C	SOX2_HMG_3	-3	0	-	0	0	.
chr11	80350690	80350691	chr11:80350691:G:A	rs34116051	G	A	G	SOX2_HMG_3	-7	0	+	0	0	.
chr11	80565007	80565008	chr11:80565008:C:G	rs74639567	C	G	C	SOX2_HMG_3	-1	0	-	0	0	.
chr11	80673655	80673656	chr11:80673656:A:G	rs4122080	A	G	A	SOX2_HMG_3	-9	0	-	0	0	.
chr11	81007012	81007013	chr11:81007013:A:G	rs77379889	A	G	A	SOX2_HMG_3	-12	0	+	0	0	.
chr11	81247120	81247121	chr11:81247121:C:A	rs4551792	C	A	C	SOX2_HMG_3	7	1	-	10.962372402418742	8.917661897685205	CCTCAATGAAATTGAAA
chr11	81303835	81303836	chr11:81303836:A:G	rs7123367	A	G	A	SOX2_HMG_3	-11	0	-	0	0	.
chr11	81412193	81412194	chr11:81412194:T:C	rs17142194	T	C	T	SOX2_HMG_3	26	0	-	0	0	.
chr11	81633672	81633673	chr11:81633673:G:A	rs4944315	G	A	A	SOX2_HMG_3	33	0	-	0	0	.
chr11	81897846	81897847	chr11:81897847:A:C	rs12365613	A	C	A	SOX2_HMG_3	19	0	+	0	0	.
chr11	82073539	82073540	chr11:82073540:A:T	rs7102900	A	T	A	SOX2_HMG_3	14	1	-	3.6798812922937842	6.392655137108079	ACTAAATGCTATTGTGG
chr11	82185008	82185009	chr11:82185009:G:A	rs142564548	G	A	G	SOX2_HMG_3	-12	0	+	0	0	.
chr11	82451407	82451408	chr11:82451408:C:T	rs4944391	C	T	T	SOX2_HMG_3	-1	0	+	0	0	.
chr11	82797944	82797945	chr11:82797945:T:C	rs551450	T	C	T	SOX2_HMG_3	-14	0	+	0	0	.
chr11	82811042	82811043	chr11:82811043:A:C	rs2510282	A	C	C	SOX2_HMG_3	-17	0	-	0	0	.
chr11	83257665	83257666	chr11:83257666:T:C	rs656515	T	C	C	SOX2_HMG_3	-2	0	-	0	0	.
chr11	83326466	83326467	chr11:83326467:G:A	rs77756822	G	A	G	SOX2_HMG_3	2	1	+	5.1845058802091515	5.1845058802091515	CAGCCATGGCAGTGATG
chr11	83326469	83326470	chr11:83326470:A:G	rs78648964	A	G	A	SOX2_HMG_3	5	1	+	5.1845058802091515	-1.7242488991060676	CAGCCATGGCAGTGATG
chr11	83572528	83572529	chr11:83572529:C:T	rs661927	C	T	T	SOX2_HMG_3	-17	0	+	0	0	.
chr11	83599455	83599456	chr11:83599456:T:C	rs763650132	T	C	T	SOX2_HMG_3	5	1	-	2.8634714355034294	-4.045283343811789	AACCAATGATAGGGAGG
chr11	83663835	83663836	chr11:83663836:C:T	rs114961528	C	T	C	SOX2_HMG_3	20	0	+	0	0	.
chr11	83827479	83827480	chr11:83827480:A:G	rs117179542	A	G	A	SOX2_HMG_3	29	0	+	0	0	.
chr11	83852861	83852862	chr11:83852862:T:C	rs4943880	T	C	T	SOX2_HMG_3	-2	0	+	0	0	.
chr11	83999391	83999392	chr11:83999392:G:A	rs115884430	G	A	G	SOX2_HMG_3	1	1	+	3.503511699680464	5.335159289759756	TGCCAATGCCAGTGTAT
chr11	83999444	83999445	chr11:83999445:C:T	rs1601091	C	T	C	SOX2_HMG_3	11	1	-	10.732992354766134	5.457380825753735	GGACAATGGCAGTGATA
chr11	84195223	84195224	chr11:84195224:T:C	rs12802109	T	C	C	SOX2_HMG_3	26	0	-	0	0	.
chr11	84406863	84406864	chr11:84406864:G:T	rs504196	G	T	T	SOX2_HMG_3	4	1	-	4.92560551284269	11.83436029215791	TGTCCATTTCATTGAGG
chr11	84626453	84626454	chr11:84626454:A:G	rs192123932	A	G	A	SOX2_HMG_3	-19	0	-	0	0	.
chr11	84650247	84650248	chr11:84650248:A:G	rs150912547	A	G	a	SOX2_HMG_3	9	1	-	6.338916920634918	5.532246786697871	GTTCAATTGTAGTGGGA
chr11	84664697	84664698	chr11:84664698:T:C	rs1940065	T	C	T	SOX2_HMG_3	11	1	+	5.0849476594824505	-1.6077438387498961	AAAAAATTGTATTGATT
chr11	84744315	84744316	chr11:84744316:T:G	rs6592199	T	G	T	SOX2_HMG_3	-4	0	+	0	0	.
chr11	84798981	84798982	chr11:84798982:C:T	rs188071279	C	T	C	SOX2_HMG_3	27	0	-	0	0	.
chr11	84853349	84853350	chr11:84853350:A:G	rs12362653	A	G	A	SOX2_HMG_3	11	1	-	4.053413631273805	-2.639277866958542	GAGTAATATTATTGAAA
chr11	85666992	85666993	chr11:85666993:A:G	rs471226	A	G	G	SOX2_HMG_3	36	0	-	0	0	.
chr11	85945858	85945859	chr11:85945859:T:C	rs34874199	T	C	T	SOX2_HMG_3	29	0	+	0	0	.
chr11	86093389	86093390	chr11:86093390:G:A	rs12284629	G	A	G	SOX2_HMG_3	31	0	+	0	0	.
chr11	86147454	86147455	chr11:86147455:G:T	rs3851178	G	T	G	SOX2_HMG_3	20	0	-	0	0	.
chr11	86194464	86194465	chr11:86194465:G:A	rs11605034	G	A	g	SOX2_HMG_3	30	0	-	0	0	.
chr11	86194470	86194471	chr11:86194471:T:G	rs7480511	T	G	G	SOX2_HMG_3	24	0	-	0	0	.
chr11	86519201	86519202	chr11:86519202:T:C	rs115451684	T	C	T	SOX2_HMG_3	-8	0	+	0	0	.
chr11	86687396	86687397	chr11:86687397:G:A	rs72961771	G	A	A	SOX2_HMG_3	-19	0	+	0	0	.
chr11	87148084	87148085	chr11:87148085:A:G	rs144715854	A	G	A	SOX2_HMG_3	33	0	-	0	0	.
chr11	87148099	87148100	chr11:87148100:T:C	rs533056	T	C	C	SOX2_HMG_3	18	0	-	0	0	.
chr11	87188245	87188246	chr11:87188246:G:A	rs301575	G	A	A	SOX2_HMG_3	-20	0	+	0	0	.
chr11	87368105	87368106	chr11:87368106:A:T	rs2155331	A	T	A	SOX2_HMG_3	21	0	+	0	0	.
chr11	88013852	88013853	chr11:88013853:C:G	rs2514251	C	G	G	SOX2_HMG_3	-18	0	-	0	0	.
chr11	88086393	88086394	chr11:88086394:C:T	rs10831489	C	T	C	SOX2_HMG_3	3	1	+	6.047987678607908	-0.8607671007073119	GGACAAGGGTATTGATA
chr11	88523635	88523636	chr11:88523636:C:A	rs1045484863	C	A	C	SOX2_HMG_3	23	0	-	0	0	.
chr11	88683247	88683248	chr11:88683248:A:G	rs7950074	A	G	A	SOX2_HMG_3	17	0	+	0	0	.
chr11	88697366	88697367	chr11:88697367:C:T	rs1109101	C	T	C	SOX2_HMG_3	-18	0	-	0	0	.
chr11	89147233	89147234	chr11:89147234:G:A	rs4519092	G	A	G	SOX2_HMG_3	25	0	-	0	0	.
chr11	90931147	90931148	chr11:90931148:A:C	rs12419648	A	C	A	SOX2_HMG_3	-12	0	+	0	0	.
chr11	91514222	91514223	chr11:91514223:A:G	rs7935947	A	G	G	SOX2_HMG_3	4	1	+	5.570586435273814	-1.338168344041408	AATCAATTTCTTTGTTT
chr11	91786479	91786480	chr11:91786480:C:T	rs2250842	C	T	T	SOX2_HMG_3	13	1	-	2.961432341796689	-3.9473224375185314	AGAAAATGTCATTGAGT
chr11	91846508	91846509	chr11:91846509:A:G	rs16916597	A	G	A	SOX2_HMG_3	28	0	+	0	0	.
chr11	91859887	91859888	chr11:91859888:G:C	rs4144909	G	C	C	SOX2_HMG_3	-17	0	+	0	0	.
chr11	92120530	92120531	chr11:92120531:C:A	rs11605206	C	A	C	SOX2_HMG_3	17	0	+	0	0	.
chr11	92286173	92286174	chr11:92286174:A:G	rs2845877	A	G	G	SOX2_HMG_3	10	1	+	1.9686662175406653	-4.940088561774555	ACACATTGCCAGTGATG
chr11	92583705	92583706	chr11:92583706:C:T	rs7951136	C	T	C	SOX2_HMG_3	20	0	-	0	0	.
chr11	92632255	92632256	chr11:92632256:A:G	rs561816	A	G	A	SOX2_HMG_3	26	0	+	0	0	.
chr11	92738975	92738976	chr11:92738976:C:T	rs78102219	C	T	C	SOX2_HMG_3	34	0	+	0	0	.
chr11	92805238	92805239	chr11:92805239:C:A	rs62622785	C	A	C	SOX2_HMG_3	36	0	-	0	0	.
chr11	92805287	92805288	chr11:92805288:C:T	rs112113306	C	T	C	SOX2_HMG_3	-13	0	-	0	0	.
chr11	92923339	92923340	chr11:92923340:A:T	rs74987082	A	T	A	SOX2_HMG_3	-5	0	-	0	0	.
chr11	93220218	93220219	chr11:93220219:C:G	rs76239026	C	G	G	SOX2_HMG_3	3	1	+	2.8826412891438626	-4.026113490171359	AGCCAATGTTAGTAATT
chr11	93289561	93289562	chr11:93289562:T:C	rs7110891	T	C	T	SOX2_HMG_3	19	0	-	0	0	.
chr11	93291418	93291419	chr11:93291419:A:C	rs10831020	A	C	C	SOX2_HMG_3	9	1	-	7.855127977308429	1.4157776062083325	AATCAAGTTTATTGAAT
chr11	93372798	93372799	chr11:93372799:T:C	rs3020071	T	C	T	SOX2_HMG_3	-11	0	+	0	0	.
chr11	93494463	93494464	chr11:93494464:C:T	rs74503446	C	T	C	SOX2_HMG_3	16	1	-	1.3936208309941986	1.1199332146039276	GTGCAACGTCAGTGAGG
chr11	93821266	93821267	chr11:93821267:C:T	rs114437106	C	T	C	SOX2_HMG_3	-6	0	+	0	0	.
chr11	93904275	93904276	chr11:93904276:G:A	rs8181578	G	A	A	SOX2_HMG_3	-1	0	+	0	0	.
chr11	93909896	93909897	chr11:93909897:T:C	rs570920422	T	C	T	SOX2_HMG_3	24	0	-	0	0	.
chr11	93986907	93986908	chr11:93986908:T:G	rs1441331489	T	G	T	SOX2_HMG_3	12	1	+	4.329239361394139	-2.57951541792108	ACACAATTTTAGTGGTG
chr11	94630553	94630554	chr11:94630554:C:T	rs628715	C	T	.	SOX2_HMG_3	-18	0	+	0	0	.
chr11	94663137	94663138	chr11:94663138:C:G	rs7115977	C	G	C	SOX2_HMG_3	30	0	-	0	0	.
chr11	94814581	94814582	chr11:94814582:C:A	rs10501816	C	A	C	SOX2_HMG_3	-18	0	+	0	0	.
chr11	94873221	94873222	chr11:94873222:C:T	rs59559050	C	T	C	SOX2_HMG_3	-15	0	+	0	0	.
chr11	94889568	94889569	chr11:94889569:G:A	rs566217	G	A	G	SOX2_HMG_3	26	0	+	0	0	.
chr11	94927144	94927145	chr11:94927145:C:T	rs690028	C	T	C	SOX2_HMG_3	18	0	+	0	0	.
chr11	94927159	94927160	chr11:94927160:G:T	rs690026	G	T	G	SOX2_HMG_3	33	0	+	0	0	.
chr11	94935063	94935064	chr11:94935064:C:T	rs78628821	C	T	C	SOX2_HMG_3	29	0	+	0	0	.
chr11	94935064	94935065	chr11:94935065:G:A	rs775735744	G	A	G	SOX2_HMG_3	30	0	+	0	0	.
chr11	95234972	95234973	chr11:95234973:T:C	rs1458451	T	C	C	SOX2_HMG_3	0	1	-	5.473114968137846	5.69370924722314	ATTCAATGTCAGAGAAG
chr11	95343125	95343126	chr11:95343126:G:T	rs564038	G	T	T	SOX2_HMG_3	36	0	-	0	0	.
chr11	95363285	95363286	chr11:95363286:G:T	rs500523	G	T	G	SOX2_HMG_3	-15	0	-	0	0	.
chr11	95549380	95549381	chr11:95549381:C:T	rs17705874	C	T	C	SOX2_HMG_3	36	0	+	0	0	.
chr11	95573155	95573156	chr11:95573156:A:C	rs1939878	A	C	C	SOX2_HMG_3	20	0	+	0	0	.
chr11	95600122	95600123	chr11:95600123:C:G	rs7109623	C	G	G	SOX2_HMG_3	-3	0	-	0	0	.
chr11	95600130	95600131	chr11:95600131:A:G	rs79249315	A	G	A	SOX2_HMG_3	-11	0	-	0	0	.
chr11	95661245	95661246	chr11:95661246:G:A	rs7946533	G	A	A	SOX2_HMG_3	3	1	-	5.965879507992962	-0.9428752713222592	TAGCAATACTATTGTAT
chr11	95795726	95795727	chr11:95795727:G:T	rs12271427	G	T	g	SOX2_HMG_3	31	0	+	0	0	.
chr11	95890398	95890399	chr11:95890399:G:A	rs112682456	G	A	G	SOX2_HMG_3	-3	0	-	0	0	.
chr11	95917340	95917341	chr11:95917341:T:C	rs116192403	T	C	T	SOX2_HMG_3	10	1	-	4.483680694512519	-2.425074084802701	AGTTAATGCTATTGTAT
chr11	95922691	95922692	chr11:95922692:A:C	rs16922701	A	C	A	SOX2_HMG_3	2	1	+	3.6261839833657934	2.4904267477282467	CAACAATTATAGTGTGC
chr11	96168912	96168913	chr11:96168913:C:T	rs188915014	C	T	C	SOX2_HMG_3	-2	0	+	0	0	.
chr11	96191934	96191935	chr11:96191935:G:A	rs139045019	G	A	G	SOX2_HMG_3	7	1	+	3.5213263545813143	0.7925392340199797	TGTCAGTGACAGTGTTG
chr11	96207397	96207398	chr11:96207398:T:C	rs61901907	T	C	T	SOX2_HMG_3	25	0	-	0	0	.
chr11	96218222	96218223	chr11:96218223:G:A	rs113409010	G	A	-	SOX2_HMG_3	32	0	+	0	0	.
chr11	96536034	96536035	chr11:96536035:G:C	rs1451329	G	C	.	SOX2_HMG_3	-15	0	-	0	0	.
chr11	97231603	97231604	chr11:97231604:C:A	rs1863599	C	A	C	SOX2_HMG_3	25	0	+	0	0	.
chr11	97345355	97345356	chr11:97345356:T:A	rs7927318	T	A	T	SOX2_HMG_3	15	1	-	2.7969227533962524	4.031825190112975	GATCAATGGCATGCAAA
chr11	97568080	97568081	chr11:97568081:G:A	rs12288740	G	A	g	SOX2_HMG_3	28	0	+	0	0	.
chr11	98070742	98070743	chr11:98070743:A:G	rs35632231	A	G	A	SOX2_HMG_3	5	1	+	10.743711878644529	3.834957099329308	AGGCAATGATAGTGATG
chr11	98107971	98107972	chr11:98107972:G:A	rs73538350	G	A	G	SOX2_HMG_3	26	0	-	0	0	.
chr11	98793490	98793491	chr11:98793491:C:T	rs146613707	C	T	C	SOX2_HMG_3	-10	0	-	0	0	.
chr11	99016041	99016042	chr11:99016042:G:A	rs764346810	G	A	G	SOX2_HMG_3	-11	0	-	0	0	.
chr11	99016049	99016050	chr11:99016050:T:G	chr11:99016050:T:G	T	G	T	SOX2_HMG_3	-19	0	-	0	0	.
chr11	99061401	99061402	chr11:99061402:T:C	rs7102254	T	C	C	SOX2_HMG_3	23	0	+	0	0	.
chr11	99318597	99318598	chr11:99318598:T:C	rs17577573	T	C	T	SOX2_HMG_3	24	0	+	0	0	.
chr11	99349409	99349410	chr11:99349410:A:G	rs10893173	A	G	g	SOX2_HMG_3	5	1	+	1.2994689539799291	-5.60928582533529	GCTCCATGGCATTTATG
chr11	99612938	99612939	chr11:99612939:A:G	rs10893594	A	G	G	SOX2_HMG_3	-20	0	+	0	0	.
chr11	99640817	99640818	chr11:99640818:C:G	rs688000	C	G	C	SOX2_HMG_3	-15	0	-	0	0	.
chr11	100566690	100566691	chr11:100566691:A:G	rs1216577	A	G	A	SOX2_HMG_3	33	0	-	0	0	.
chr11	100680185	100680186	chr11:100680186:T:C	rs10160533	T	C	C	SOX2_HMG_3	-16	0	-	0	0	.
chr11	101021022	101021023	chr11:101021023:T:G	rs529808	T	G	G	SOX2_HMG_3	-7	0	-	0	0	.
chr11	101511209	101511210	chr11:101511210:T:G	rs7116629	T	G	T	SOX2_HMG_3	27	0	-	0	0	.
chr11	101835343	101835344	chr11:101835344:C:T	rs4575231	C	T	C	SOX2_HMG_3	25	0	+	0	0	.
chr11	101852264	101852265	chr11:101852265:A:T	rs56311893	A	T	A	SOX2_HMG_3	2	1	-	1.946270162636486	-1.921344672041554	GATGAATGTCACTGTTG
chr11	102079899	102079900	chr11:102079900:G:A	rs138065145	G	A	G	SOX2_HMG_3	32	0	-	0	0	.
chr11	102108640	102108641	chr11:102108641:C:T	rs7931899	C	T	T	SOX2_HMG_3	30	0	-	0	0	.
chr11	102224603	102224604	chr11:102224604:T:C	rs10895278	T	C	T	SOX2_HMG_3	19	0	+	0	0	.
chr11	102306083	102306084	chr11:102306084:C:G	chr11:102306084:C:G	C	G	C	SOX2_HMG_3	-3	0	+	0	0	.
chr11	102342701	102342702	chr11:102342702:A:G	rs115631785	A	G	a	SOX2_HMG_3	10	1	+	4.179210682652988	-2.7295440966622326	GAGCAATTACATGGATA
chr11	102345997	102345998	chr11:102345998:G:A	rs35206613	G	A	g	SOX2_HMG_3	-11	0	-	0	0	.
chr11	102613067	102613068	chr11:102613068:A:G	chr11:102613068:A:G	A	G	A	SOX2_HMG_3	32	0	-	0	0	.
chr11	102613075	102613076	chr11:102613076:A:G	chr11:102613076:A:G	A	G	A	SOX2_HMG_3	24	0	-	0	0	.
chr11	102613094	102613095	chr11:102613095:T:C	rs1711413	T	C	C	SOX2_HMG_3	5	1	-	6.371305212941531	-0.5374495663736903	TTTCAATTCCAGTGAGC
chr11	102844316	102844317	chr11:102844317:T:C	rs522616	T	C	T	SOX2_HMG_3	20	0	-	0	0	.
chr11	102930184	102930185	chr11:102930185:T:C	rs4754052	T	C	C	SOX2_HMG_3	36	0	-	0	0	.
chr11	102930199	102930200	chr11:102930200:G:A	chr11:102930200:G:A	G	A	G	SOX2_HMG_3	21	0	-	0	0	.
chr11	102974591	102974592	chr11:102974592:C:T	rs544345	C	T	.	SOX2_HMG_3	23	0	-	0	0	.
chr11	103463749	103463750	chr11:103463750:G:T	rs60614960	G	T	T	SOX2_HMG_3	24	0	+	0	0	.
chr11	103529429	103529430	chr11:103529430:T:C	rs11820878	T	C	T	SOX2_HMG_3	-16	0	+	0	0	.
chr11	103529478	103529479	chr11:103529479:G:A	rs115605699	G	A	G	SOX2_HMG_3	33	0	+	0	0	.
chr11	103662344	103662345	chr11:103662345:A:G	rs881352	A	G	A	SOX2_HMG_3	-1	0	+	0	0	.
chr11	103704112	103704113	chr11:103704113:A:G	rs79917023	A	G	A	SOX2_HMG_3	-10	0	-	0	0	.
chr11	104051257	104051258	chr11:104051258:C:T	rs61892152	C	T	C	SOX2_HMG_3	29	0	-	0	0	.
chr11	104111104	104111105	chr11:104111105:A:G	rs168636	A	G	G	SOX2_HMG_3	-1	0	-	0	0	.
chr11	104488707	104488708	chr11:104488708:G:A	rs78526685	G	A	G	SOX2_HMG_3	2	1	+	5.329863370659589	5.329863370659589	TAGCAATGGTATTTAGA
chr11	104504982	104504983	chr11:104504983:A:G	rs994491	A	G	A	SOX2_HMG_3	19	0	+	0	0	.
chr11	104741904	104741905	chr11:104741905:A:G	rs2845891	A	G	a	SOX2_HMG_3	5	1	+	3.6651330959257935	-3.243621683389425	ATTCCATTGTAGTGAGG
chr11	104846074	104846075	chr11:104846075:T:A	rs12274726	T	A	T	SOX2_HMG_3	-14	0	+	0	0	.
chr11	105047040	105047041	chr11:105047041:C:T	rs151249914	C	T	.	SOX2_HMG_3	25	0	+	0	0	.
chr11	105055339	105055340	chr11:105055340:G:A	rs484345	G	A	.	SOX2_HMG_3	36	0	-	0	0	.
chr11	105056900	105056901	chr11:105056901:G:A	rs521869	G	A	.	SOX2_HMG_3	11	1	+	5.96846502092073	0.6928534919083333	ACACAATATAAGTGATG
chr11	105086105	105086106	chr11:105086106:A:G	rs1785866	A	G	.	SOX2_HMG_3	25	0	-	0	0	.
chr11	105145159	105145160	chr11:105145160:C:T	rs1354322	C	T	C	SOX2_HMG_3	23	0	+	0	0	.
chr11	105156289	105156290	chr11:105156290:T:C	rs78489440	T	C	T	SOX2_HMG_3	-20	0	-	0	0	.
chr11	105542536	105542537	chr11:105542537:G:C	rs2513258	G	C	g	SOX2_HMG_3	-14	0	-	0	0	.
chr11	105556889	105556890	chr11:105556890:A:T	rs1942973	A	T	T	SOX2_HMG_3	2	1	+	6.3553345794655645	10.222949414143606	CTACAATGCTATTGTAA
chr11	105726047	105726048	chr11:105726048:G:A	rs1954762	G	A	G	SOX2_HMG_3	24	0	+	0	0	.
chr11	105975393	105975394	chr11:105975394:T:C	rs562546	T	C	C	SOX2_HMG_3	-16	0	-	0	0	.
chr11	105975395	105975396	chr11:105975396:G:A	rs10895888	G	A	G	SOX2_HMG_3	-18	0	-	0	0	.
chr11	106012886	106012887	chr11:106012887:T:C	rs2847181	T	C	T	SOX2_HMG_3	1	1	-	5.864506814512064	4.032859224432771	AATCCATTGCAGTGAGG
chr11	106047864	106047865	chr11:106047865:T:A	rs10791779	T	A	T	SOX2_HMG_3	-20	0	+	0	0	.
chr11	106078373	106078374	chr11:106078374:C:A	chr11:106078374:C:A	C	A	c	SOX2_HMG_3	-14	0	+	0	0	.
chr11	106368515	106368516	chr11:106368516:T:A	rs636907	T	A	A	SOX2_HMG_3	-14	0	+	0	0	.
chr11	106805538	106805539	chr11:106805539:C:G	rs114642868	C	G	C	SOX2_HMG_3	22	0	-	0	0	.
chr11	106854235	106854236	chr11:106854236:A:G	rs11524439	A	G	A	SOX2_HMG_3	31	0	+	0	0	.
chr11	106942091	106942092	chr11:106942092:C:T	rs7930761	C	T	T	SOX2_HMG_3	24	0	-	0	0	.
chr11	107186857	107186858	chr11:107186858:C:T	rs4323833	C	T	T	SOX2_HMG_3	21	0	-	0	0	.
chr11	107358009	107358010	chr11:107358010:G:A	rs537341	G	A	A	SOX2_HMG_3	-15	0	+	0	0	.
chr11	108020074	108020075	chr11:108020075:C:T	rs3858391	C	T	C	SOX2_HMG_3	-18	0	-	0	0	.
chr11	108093423	108093424	chr11:108093424:C:A	chr11:108093424:C:A	C	A	C	SOX2_HMG_3	26	0	-	0	0	.
chr11	108561881	108561882	chr11:108561882:C:T	rs4437999	C	T	C	SOX2_HMG_3	-2	0	+	0	0	.
chr11	108561907	108561908	chr11:108561908:A:G	rs2256362	A	G	A	SOX2_HMG_3	24	0	+	0	0	.
chr11	108569768	108569769	chr11:108569769:A:T	rs17693854	A	T	A	SOX2_HMG_3	1	1	+	5.507751024737897	2.5017071722145814	CAGAAATGTTATTGAAT
chr11	109033823	109033824	chr11:109033824:G:A	rs1018227	G	A	G	SOX2_HMG_3	-19	0	-	0	0	.
chr11	109184558	109184559	chr11:109184559:T:C	rs993882125	T	C	T	SOX2_HMG_3	4	1	-	6.223492441106562	-0.6852623382086585	TGACAATGAAAGTGATC
chr11	109794366	109794367	chr11:109794367:T:C	rs2716023	T	C	T	SOX2_HMG_3	-10	0	-	0	0	.
chr11	109891059	109891060	chr11:109891060:C:T	rs561781	C	T	C	SOX2_HMG_3	3	1	+	4.474076066118458	-2.4346787131967598	AAGCACTGGCAGTGAAG
chr11	109915464	109915465	chr11:109915465:T:G	rs6589095	T	G	G	SOX2_HMG_3	5	1	-	12.196196441378438	5.287441662063216	CATCAATGGAAGTGTTG
chr11	109994094	109994095	chr11:109994095:A:T	rs73547119	A	T	A	SOX2_HMG_3	2	1	-	2.795575156147507	-1.0720396785305333	TGTCAACTCCAGTGAAA
chr11	110091705	110091706	chr11:110091706:A:G	rs4561177	A	G	A	SOX2_HMG_3	30	0	-	0	0	.
chr11	110132659	110132660	chr11:110132660:T:C	rs610984	T	C	T	SOX2_HMG_3	31	0	+	0	0	.
chr11	110433878	110433879	chr11:110433879:T:C	rs7121928	T	C	T	SOX2_HMG_3	-5	0	-	0	0	.
chr11	110716223	110716224	chr11:110716224:T:C	rs17111661	T	C	t	SOX2_HMG_3	29	0	+	0	0	.
chr11	110766587	110766588	chr11:110766588:T:C	rs118069550	T	C	T	SOX2_HMG_3	9	1	-	2.622841783498388	-1.9579332456549812	GTTCAATGGAAGAGACA
chr11	110948341	110948342	chr11:110948342:A:G	rs59347061	A	G	A	SOX2_HMG_3	2	1	-	7.635717310411776	2.6323452400961873	AGTAAATGTTATTGAGT
chr11	110952738	110952739	chr11:110952739:A:G	rs1872764	A	G	G	SOX2_HMG_3	31	0	-	0	0	.
chr11	111051021	111051022	chr11:111051022:G:T	rs111849446	G	T	T	SOX2_HMG_3	30	0	+	0	0	.
chr11	111128784	111128785	chr11:111128785:A:G	rs10502131	A	G	A	SOX2_HMG_3	-6	0	+	0	0	.
chr11	111202054	111202055	chr11:111202055:G:A	rs949279	G	A	G	SOX2_HMG_3	35	0	+	0	0	.
chr11	111210020	111210021	chr11:111210021:G:A	rs11213781	G	A	G	SOX2_HMG_3	31	0	+	0	0	.
chr11	111312431	111312432	chr11:111312432:A:G	rs4617622	A	G	G	SOX2_HMG_3	-15	0	+	0	0	.
chr11	111368639	111368640	chr11:111368640:G:C	rs12419634	G	C	g	SOX2_HMG_3	-18	0	+	0	0	.
chr11	111402960	111402961	chr11:111402961:T:A	rs10891259	T	A	A	SOX2_HMG_3	1	1	-	6.926698595206735	3.9206547426834186	GATCAGTTCCATTGAAA
chr11	111554379	111554380	chr11:111554380:C:T	rs682239	C	T	C	SOX2_HMG_3	-10	0	+	0	0	.
chr11	111788354	111788355	chr11:111788355:T:G	chr11:111788355:T:G	T	G	T	SOX2_HMG_3	11	1	+	3.1494293103529847	1.7323493411330364	TATCAAGGGCTTTGATA
chr11	111788365	111788366	chr11:111788366:A:C	chr11:111788366:A:C	A	C	A	SOX2_HMG_3	22	0	+	0	0	.
chr11	112401271	112401272	chr11:112401272:G:A	rs1525407	G	A	A	SOX2_HMG_3	-1	0	+	0	0	.
chr11	112420945	112420946	chr11:112420946:T:G	rs1000625	T	G	G	SOX2_HMG_3	28	0	+	0	0	.
chr11	112617320	112617321	chr11:112617321:A:G	rs2513320	A	G	A	SOX2_HMG_3	-19	0	-	0	0	.
chr11	112656856	112656857	chr11:112656857:G:A	rs10891407	G	A	G	SOX2_HMG_3	-11	0	-	0	0	.
chr11	113363956	113363957	chr11:113363957:T:C	rs719802	T	C	C	SOX2_HMG_3	36	0	+	0	0	.
chr11	113503290	113503291	chr11:113503291:G:A	rs10891564	G	A	G	SOX2_HMG_3	31	0	-	0	0	.
chr11	113549226	113549227	chr11:113549227:A:T	rs117667905	A	T	A	SOX2_HMG_3	17	0	-	0	0	.
chr11	113549251	113549252	chr11:113549252:A:G	rs10891571	A	G	A	SOX2_HMG_3	-8	0	-	0	0	.
chr11	113668357	113668358	chr11:113668358:A:G	rs3934007	A	G	G	SOX2_HMG_3	-16	0	+	0	0	.
chr11	114154809	114154810	chr11:114154810:A:C	rs188314578	A	C	A	SOX2_HMG_3	1	1	+	6.598537299414066	3.5924934468907512	AAACAATGTGATTGAGA
chr11	114736170	114736171	chr11:114736171:G:A	rs117366190	G	A	G	SOX2_HMG_3	-8	0	+	0	0	.
chr11	114819728	114819729	chr11:114819729:G:T	rs4938141	G	T	G	SOX2_HMG_3	-10	0	-	0	0	.
chr11	115073362	115073363	chr11:115073363:C:T	rs2513678	C	T	T	SOX2_HMG_3	10	1	-	3.211677981812041	10.12043276112726	GATTAATGTTGTTGAAT
chr11	115194171	115194172	chr11:115194172:C:G	rs1170043416	C	G	C	SOX2_HMG_3	8	1	-	4.955666818273443	4.221398385502242	TAACAATGGCATTCAAA
chr11	115201636	115201637	chr11:115201637:A:G	rs77707760	A	G	G	SOX2_HMG_3	23	0	+	0	0	.
chr11	115466857	115466858	chr11:115466858:T:A	rs314496	T	A	A	SOX2_HMG_3	18	0	+	0	0	.
chr11	115622851	115622852	chr11:115622852:A:G	rs146936541	A	G	A	SOX2_HMG_3	19	0	+	0	0	.
chr11	115692714	115692715	chr11:115692715:T:C	rs1784965	T	C	C	SOX2_HMG_3	-17	0	-	0	0	.
chr11	115697871	115697872	chr11:115697872:T:C	rs141382640	T	C	T	SOX2_HMG_3	7	1	-	2.5174716796805843	5.24625880024192	GGTCTATAGAAGTGAGG
chr11	115981193	115981194	chr11:115981194:A:G	rs77730455	A	G	A	SOX2_HMG_3	7	1	-	5.004886212629475	0.3167545059270364	AATCAAATGTATTGTAT
chr11	115984361	115984362	chr11:115984362:G:T	rs1262514	G	T	G	SOX2_HMG_3	16	1	-	6.796411168094677	8.52256604662095	GAGCAATGATATTGGAC
chr11	116063522	116063523	chr11:116063523:A:T	rs736287	A	T	A	SOX2_HMG_3	-14	0	-	0	0	.
chr11	116529426	116529427	chr11:116529427:C:T	rs762438434	C	T	C	SOX2_HMG_3	6	1	+	8.3416909007965	15.25044568011172	AATCAACGGCAGTGAAG
chr11	116614865	116614866	chr11:116614866:T:A	rs477047	T	A	T	SOX2_HMG_3	-3	0	-	0	0	.
chr11	116614881	116614882	chr11:116614882:G:A	rs476362	G	A	A	SOX2_HMG_3	-19	0	-	0	0	.
chr11	116830957	116830958	chr11:116830958:T:A	rs2070666	T	A	T	SOX2_HMG_3	-16	0	+	0	0	.
chr11	116879909	116879910	chr11:116879910:G:A	rs116724830	G	A	G	SOX2_HMG_3	-13	0	-	0	0	.
chr11	116940058	116940059	chr11:116940059:T:C	rs79394589	T	C	T	SOX2_HMG_3	32	0	+	0	0	.
chr11	117075521	117075522	chr11:117075522:C:T	rs12274388	C	T	C	SOX2_HMG_3	3	1	+	8.128697066235373	1.219942286920153	ATTCTATGTTATTGATT
chr11	117077725	117077726	chr11:117077726:A:G	rs4938336	A	G	A	SOX2_HMG_3	-15	0	-	0	0	.
chr11	117083848	117083849	chr11:117083849:C:T	rs10892071	C	T	T	SOX2_HMG_3	23	0	-	0	0	.
chr11	117180201	117180202	chr11:117180202:C:T	rs12419178	C	T	C	SOX2_HMG_3	-5	0	+	0	0	.
chr11	117426875	117426876	chr11:117426876:T:A	chr11:117426876:T:A	T	A	T	SOX2_HMG_3	31	0	-	0	0	.
chr11	117565069	117565070	chr11:117565070:C:A	rs12789727	C	A	C	SOX2_HMG_3	16	1	-	3.652147951166966	2.849077509390776	CGTCATTGAAAGTGAGG
chr11	117823373	117823374	chr11:117823374:A:G	rs635706	A	G	G	SOX2_HMG_3	27	0	+	0	0	.
chr11	117929984	117929985	chr11:117929985:C:T	rs10790223	C	T	c	SOX2_HMG_3	-12	0	+	0	0	.
chr11	118028135	118028136	chr11:118028136:G:A	rs10458939	G	A	G	SOX2_HMG_3	28	0	-	0	0	.
chr11	118202000	118202001	chr11:118202001:C:T	rs12801003	C	T	C	SOX2_HMG_3	-15	0	+	0	0	.
chr11	118305381	118305382	chr11:118305382:A:G	rs3782040	A	G	A	SOX2_HMG_3	31	0	-	0	0	.
chr11	118595231	118595232	chr11:118595232:A:C	rs76987598	A	C	A	SOX2_HMG_3	34	0	-	0	0	.
chr11	118834944	118834945	chr11:118834945:A:G	rs649338	A	G	G	SOX2_HMG_3	4	1	+	5.283504446132306	-1.6252503331829153	TTTCATTGTTATTGTTA
chr11	118881468	118881469	chr11:118881469:T:C	rs61150131	T	C	T	SOX2_HMG_3	5	1	-	5.210107924855988	-1.6986468544592335	CATCAATGAAGGTGAGA
chr11	119019189	119019190	chr11:119019190:T:G	rs781982243	T	G	T	SOX2_HMG_3	-12	0	-	0	0	.
chr11	119879102	119879103	chr11:119879103:G:T	rs11217551	G	T	G	SOX2_HMG_3	8	1	-	5.505520216574997	5.390744701982568	AATCAATTCTGTTGTTT
chr11	120086842	120086843	chr11:120086843:T:C	rs185776522	T	C	T	SOX2_HMG_3	6	1	+	8.131824852136061	1.2230700728208403	TGACAATGAAATTGAAA
chr11	120099829	120099830	chr11:120099830:A:C	rs6589796	A	C	A	SOX2_HMG_3	11	1	-	2.5624110424126814	1.1453310731927315	TATCAATGGTATGAAGG
chr11	120102152	120102153	chr11:120102153:T:G	rs7938843	T	G	G	SOX2_HMG_3	-5	0	+	0	0	.
chr11	120128482	120128483	chr11:120128483:A:G	rs569044	A	G	G	SOX2_HMG_3	-20	0	-	0	0	.
chr11	120235376	120235377	chr11:120235377:G:T	rs947906	G	T	G	SOX2_HMG_3	23	0	-	0	0	.
chr11	120235386	120235387	chr11:120235387:C:T	rs150711302	C	T	C	SOX2_HMG_3	13	1	-	6.247321257848294	-0.6614335214669251	AATCAATTTTTTTGACT
chr11	120912607	120912608	chr11:120912608:G:A	rs143524866	G	A	G	SOX2_HMG_3	22	0	+	0	0	.
chr11	120912621	120912622	chr11:120912622:T:C	rs57584368	T	C	T	SOX2_HMG_3	36	0	+	0	0	.
chr11	120932731	120932732	chr11:120932732:A:G	chr11:120932732:A:G	A	G	A	SOX2_HMG_3	10	1	+	6.124277349214799	-0.7844774301004225	GTTAAATGACATTGAAG
chr11	121135588	121135589	chr11:121135589:G:C	rs678275	G	C	C	SOX2_HMG_3	30	0	+	0	0	.
chr11	121258138	121258139	chr11:121258139:G:A	rs73020048	G	A	G	SOX2_HMG_3	-7	0	+	0	0	.
chr11	121282711	121282712	chr11:121282712:G:A	rs7949987	G	A	A	SOX2_HMG_3	30	0	-	0	0	.
chr11	121282745	121282746	chr11:121282746:A:T	rs10750182	A	T	a	SOX2_HMG_3	-4	0	-	0	0	.
chr11	121364419	121364420	chr11:121364420:A:T	rs10790444	A	T	T	SOX2_HMG_3	10	1	+	4.391728210396515	-2.517026568918705	AGTCAATATGAGTGAAT
chr11	121452767	121452768	chr11:121452768:G:C	rs578506	G	C	G	SOX2_HMG_3	23	0	-	0	0	.
chr11	121514804	121514805	chr11:121514805:A:G	rs141310066	A	G	A	SOX2_HMG_3	-11	0	-	0	0	.
chr11	121572866	121572867	chr11:121572867:T:C	rs755547384	T	C	T	SOX2_HMG_3	6	1	+	2.662486875261314	-4.246267904053907	GCTCAATTACAGAGAAG
chr11	121665301	121665302	chr11:121665302:G:C	rs568599	G	C	G	SOX2_HMG_3	24	0	+	0	0	.
chr11	121671567	121671568	chr11:121671568:G:C	rs370976282	G	C	G	SOX2_HMG_3	22	0	-	0	0	.
chr11	121891418	121891419	chr11:121891419:C:T	rs2370643	C	T	T	SOX2_HMG_3	-11	0	-	0	0	.
chr11	121902046	121902047	chr11:121902047:G:A	rs3802910	G	A	G	SOX2_HMG_3	33	0	-	0	0	.
chr11	121902083	121902084	chr11:121902084:T:A	rs3802909	T	A	T	SOX2_HMG_3	-4	0	-	0	0	.
chr11	122099560	122099561	chr11:122099561:C:T	rs643925	C	T	T	SOX2_HMG_3	-5	0	-	0	0	.
chr11	122177787	122177788	chr11:122177788:A:G	rs483319	A	G	A	SOX2_HMG_3	-8	0	+	0	0	.
chr11	122791772	122791773	chr11:122791773:T:C	rs11218812	T	C	T	SOX2_HMG_3	2	1	+	6.223849409745461	1.2204773394298742	GGTCAATGATTTTGACA
chr11	122872170	122872171	chr11:122872171:G:C	rs57422890	G	C	G	SOX2_HMG_3	-15	0	+	0	0	.
chr11	122872207	122872208	chr11:122872208:T:C	rs115240626	T	C	T	SOX2_HMG_3	22	0	+	0	0	.
chr11	123064378	123064379	chr11:123064379:A:G	rs2276078	A	G	A	SOX2_HMG_3	29	0	+	0	0	.
chr11	123153120	123153121	chr11:123153121:G:A	rs11821710	G	A	A	SOX2_HMG_3	21	0	+	0	0	.
chr11	123543742	123543743	chr11:123543743:A:G	rs1784356	A	G	G	SOX2_HMG_3	-15	0	-	0	0	.
chr11	123559266	123559267	chr11:123559267:G:A	rs702737	G	A	G	SOX2_HMG_3	19	0	+	0	0	.
chr11	123559281	123559282	chr11:123559282:C:G	rs702736	C	G	G	SOX2_HMG_3	34	0	+	0	0	.
chr11	123651896	123651897	chr11:123651897:G:C	rs73031649	G	C	G	SOX2_HMG_3	-5	0	-	0	0	.
chr11	123683837	123683838	chr11:123683838:G:T	rs12799073	G	T	G	SOX2_HMG_3	-15	0	+	0	0	.
chr11	123683877	123683878	chr11:123683878:C:G	rs1676623	C	G	C	SOX2_HMG_3	25	0	+	0	0	.
chr11	123799748	123799749	chr11:123799749:G:A	rs11605363	G	A	G	SOX2_HMG_3	23	0	-	0	0	.
chr11	124177364	124177365	chr11:124177365:C:T	rs4936905	C	T	C	SOX2_HMG_3	-17	0	+	0	0	.
chr11	124328931	124328932	chr11:124328932:C:T	rs4057919	C	T	C	SOX2_HMG_3	17	0	+	0	0	.
chr11	124423736	124423737	chr11:124423737:A:G	rs10790676	A	G	G	SOX2_HMG_3	-18	0	+	0	0	.
chr11	124826021	124826022	chr11:124826022:A:G	rs111285852	A	G	A	SOX2_HMG_3	22	0	+	0	0	.
chr11	125155018	125155019	chr11:125155019:C:T	rs12789521	C	T	C	SOX2_HMG_3	-3	0	+	0	0	.
chr11	125313827	125313828	chr11:125313828:G:A	rs61684908	G	A	G	SOX2_HMG_3	1	1	+	3.6164265795081194	5.448074169587411	TGTCCATGGTATTGGAA
chr11	125321946	125321947	chr11:125321947:T:C	rs10893370	T	C	C	SOX2_HMG_3	31	0	-	0	0	.
chr11	125386621	125386622	chr11:125386622:A:G	rs10736546	A	G	G	SOX2_HMG_3	16	1	+	2.648827481214969	2.9225150976052405	GATTAATGATAGTGCTA
chr11	125390909	125390910	chr11:125390910:C:G	rs12419130	C	G	C	SOX2_HMG_3	0	1	-	3.6994140314104995	2.9543471296991757	GGTGAATACCAGTGATT
chr11	125585664	125585665	chr11:125585665:T:C	rs111877163	T	C	T	SOX2_HMG_3	10	1	-	4.861449895620951	-2.0473048836942693	CTGCAATACTATTGTTA
chr11	125592968	125592969	chr11:125592969:T:C	chr11:125592969:T:C	T	C	T	SOX2_HMG_3	6	1	+	2.253270937338659	-4.65548384197656	AGTCCATGGCGTTGATG
chr11	125623213	125623214	chr11:125623214:C:T	rs11220164	C	T	C	SOX2_HMG_3	11	1	+	3.455537553298051	10.148229051530398	AATCCATGATACTGATT
chr11	125689863	125689864	chr11:125689864:G:C	rs73616081	G	C	G	SOX2_HMG_3	-9	0	-	0	0	.
chr11	125978523	125978524	chr11:125978524:A:C	rs636641	A	C	A	SOX2_HMG_3	-1	0	+	0	0	.
chr11	125981159	125981160	chr11:125981160:A:G	rs564214	A	G	G	SOX2_HMG_3	-3	0	-	0	0	.
chr11	125990245	125990246	chr11:125990246:T:C	rs541614757	T	C	T	SOX2_HMG_3	1	1	-	2.512609097115451	0.6809615070361592	CATCCATGACAGTGGAA
chr11	125990265	125990266	chr11:125990266:G:T	rs7925077	G	T	G	SOX2_HMG_3	-19	0	-	0	0	.
chr11	126034827	126034828	chr11:126034828:A:G	chr11:126034828:A:G	A	G	A	SOX2_HMG_3	20	0	-	0	0	.
chr11	126197772	126197773	chr11:126197773:C:T	rs183925341	C	T	C	SOX2_HMG_3	32	0	-	0	0	.
chr11	126197823	126197824	chr11:126197824:T:A	chr11:126197824:T:A	T	A	A	SOX2_HMG_3	-19	0	-	0	0	.
chr11	126197823	126197824	chr11:126197824:T:G	rs591073	T	G	A	SOX2_HMG_3	-19	0	-	0	0	.
chr11	126434366	126434367	chr11:126434367:C:T	rs35879271	C	T	C	SOX2_HMG_3	-1	0	-	0	0	.
chr11	126608412	126608413	chr11:126608413:T:A	rs479139	T	A	T	SOX2_HMG_3	20	0	-	0	0	.
chr11	126608441	126608442	chr11:126608442:G:C	rs674875	G	C	C	SOX2_HMG_3	-9	0	-	0	0	.
chr11	126634409	126634410	chr11:126634410:A:G	rs879164	A	G	A	SOX2_HMG_3	12	1	-	3.278891126519989	-3.6298636527952315	AAACTATGGTATTGTGA
chr11	126669729	126669730	chr11:126669730:C:T	rs11220579	C	T	T	SOX2_HMG_3	25	0	-	0	0	.
chr11	126790714	126790715	chr11:126790715:C:T	rs1002768894	C	T	C	SOX2_HMG_3	35	0	+	0	0	.
chr11	126915580	126915581	chr11:126915581:C:T	rs75596471	C	T	C	SOX2_HMG_3	18	0	-	0	0	.
chr11	126915615	126915616	chr11:126915616:C:A	rs78688752	C	A	C	SOX2_HMG_3	-17	0	-	0	0	.
chr11	127014084	127014085	chr11:127014085:A:G	rs1287145	A	G	G	SOX2_HMG_3	10	1	+	3.487473135343229	-3.4212816439719913	AATGAATTTCAGTGGTG
chr11	127218319	127218320	chr11:127218320:A:T	rs4937227	A	T	A	SOX2_HMG_3	6	1	-	3.248152943823396	-3.660601835491826	TACCTATGATATTGAAT
chr11	127621026	127621027	chr11:127621027:C:T	rs74433549	C	T	C	SOX2_HMG_3	-6	0	-	0	0	.
chr11	127815696	127815697	chr11:127815697:A:T	rs1364787	A	T	T	SOX2_HMG_3	18	0	-	0	0	.
chr11	127836504	127836505	chr11:127836505:T:C	rs12421672	T	C	C	SOX2_HMG_3	22	0	+	0	0	.
chr11	127924618	127924619	chr11:127924619:A:T	rs1834312	A	T	T	SOX2_HMG_3	2	1	-	2.6533984173634253	-1.2142164173146142	GATAAAAGACATTGATT
chr11	127999319	127999320	chr11:127999320:A:G	rs35803475	A	G	A	SOX2_HMG_3	-10	0	-	0	0	.
chr11	128026579	128026580	chr11:128026580:A:G	rs1648176	A	G	G	SOX2_HMG_3	-4	0	-	0	0	.
chr11	128171686	128171687	chr11:128171687:G:A	rs7933438	G	A	A	SOX2_HMG_3	28	0	-	0	0	.
chr11	128293312	128293313	chr11:128293313:C:T	rs34415928	C	T	C	SOX2_HMG_3	32	0	-	0	0	.
chr11	128388240	128388241	chr11:128388241:C:T	rs79465012	C	T	C	SOX2_HMG_3	27	0	+	0	0	.
chr11	128533069	128533070	chr11:128533070:C:T	rs145437967	C	T	C	SOX2_HMG_3	-20	0	+	0	0	.
chr11	128533108	128533109	chr11:128533109:G:A	rs11825217	G	A	G	SOX2_HMG_3	19	0	+	0	0	.
chr11	128983244	128983245	chr11:128983245:C:T	rs73029243	C	T	C	SOX2_HMG_3	-3	0	+	0	0	.
chr11	129034279	129034280	chr11:129034280:C:T	rs10893952	C	T	t	SOX2_HMG_3	19	0	-	0	0	.
chr11	129276179	129276180	chr11:129276180:T:G	chr11:129276180:T:G	T	G	T	SOX2_HMG_3	-14	0	-	0	0	.
chr11	129369195	129369196	chr11:129369196:C:A	rs12294383	C	A	C	SOX2_HMG_3	-19	0	+	0	0	.
chr11	129369213	129369214	chr11:129369214:C:T	rs1456003547	C	T	C	SOX2_HMG_3	-1	0	+	0	0	.
chr11	129681497	129681498	chr11:129681498:A:G	rs11221802	A	G	a	SOX2_HMG_3	29	0	+	0	0	.
chr11	129842123	129842124	chr11:129842124:C:A	rs10894152	C	A	C	SOX2_HMG_3	-6	0	-	0	0	.
chr11	129927373	129927374	chr11:129927374:A:G	rs10791058	A	G	G	SOX2_HMG_3	4	1	+	5.5888331168651275	-1.319921662450094	AACCAATACTATTGTGA
chr11	129992867	129992868	chr11:129992868:C:G	rs147131193	C	G	C	SOX2_HMG_3	-11	0	-	0	0	.
chr11	129998384	129998385	chr11:129998385:A:G	rs78439173	A	G	A	SOX2_HMG_3	35	0	+	0	0	.
chr11	130087874	130087875	chr11:130087875:T:G	rs10431049	T	G	T	SOX2_HMG_3	-9	0	+	0	0	.
chr11	130201003	130201004	chr11:130201004:A:G	rs513461	A	G	G	SOX2_HMG_3	4	1	+	7.7987328378931124	0.8899780585778929	CACCAATGATAGTGACA
chr11	130492633	130492634	chr11:130492634:G:T	rs11222129	G	T	g	SOX2_HMG_3	8	1	-	4.272790150894034	4.158014636301606	AAAAAATGCTAGTGAAA
chr11	130793367	130793368	chr11:130793368:C:T	rs6590510	C	T	T	SOX2_HMG_3	8	1	-	5.804798203900949	4.955754256537321	GATCAATCGAAGTGACA
chr11	130825876	130825877	chr11:130825877:C:T	rs114579854	C	T	C	SOX2_HMG_3	29	0	+	0	0	.
chr11	130848815	130848816	chr11:130848816:T:G	rs10791098	T	G	T	SOX2_HMG_3	-20	0	-	0	0	.
chr11	130890307	130890308	chr11:130890308:C:T	rs7937514	C	T	T	SOX2_HMG_3	-5	0	-	0	0	.
chr11	130894553	130894554	chr11:130894554:G:T	rs11222379	G	T	G	SOX2_HMG_3	-17	0	+	0	0	.
chr11	131036859	131036860	chr11:131036860:T:C	rs1655489	T	C	C	SOX2_HMG_3	6	1	+	5.0494531473014375	-1.8593016320137832	GCTCAATGATCTTGACA
chr11	131327535	131327536	chr11:131327536:T:A	rs2511505	T	A	T	SOX2_HMG_3	30	0	+	0	0	.
chr11	131678631	131678632	chr11:131678632:G:A	rs2658833	G	A	A	SOX2_HMG_3	10	1	-	4.9450083001016	4.9450083001016	GAGCAATGCCCTTGAGG
chr11	131765021	131765022	chr11:131765022:G:A	rs73039741	G	A	G	SOX2_HMG_3	0	1	+	1.9073462276041337	1.68675194851884	GCTCACTGGTAGTGGAA
chr11	131881189	131881190	chr11:131881190:G:A	rs71483694	G	A	G	SOX2_HMG_3	25	0	-	0	0	.
chr11	132175196	132175197	chr11:132175197:A:G	rs7950239	A	G	G	SOX2_HMG_3	4	1	+	3.226378366065027	-3.6823764132501933	CAGCAATGGTGTTGGTG
chr11	132209263	132209264	chr11:132209264:T:C	rs6590630	T	C	C	SOX2_HMG_3	-4	0	+	0	0	.
chr11	132278643	132278644	chr11:132278644:C:T	rs4937690	C	T	C	SOX2_HMG_3	27	0	+	0	0	.
chr11	132528237	132528238	chr11:132528238:A:G	rs2512705	A	G	A	SOX2_HMG_3	1	1	+	6.7168446742445465	4.885197084165254	GATCAATATTATTTTTG
chr11	132528265	132528266	chr11:132528266:C:G	rs2512706	C	G	G	SOX2_HMG_3	29	0	+	0	0	.
chr11	132714552	132714553	chr11:132714553:G:A	rs1793258	G	A	A	SOX2_HMG_3	26	0	-	0	0	.
chr11	132941171	132941172	chr11:132941172:G:C	rs150452918	G	C	G	SOX2_HMG_3	8	1	-	2.9941374642847154	3.7284058970559157	CTTCAATTCTAATGTTG
chr11	132961979	132961980	chr11:132961980:C:T	rs529320890	C	T	C	SOX2_HMG_3	31	0	-	0	0	.
chr11	133024684	133024685	chr11:133024685:G:A	rs61910329	G	A	G	SOX2_HMG_3	11	1	+	1.8827132538447942	-3.3928982751676036	GGTCTATGAAAGTGGTG
chr11	133062768	133062769	chr11:133062769:C:T	rs10894645	C	T	C	SOX2_HMG_3	11	1	-	6.235369824420594	0.9597582954081951	GATCAATGACAGGGTTG
chr11	133916694	133916695	chr11:133916695:A:G	rs3824992	A	G	G	SOX2_HMG_3	-4	0	+	0	0	.
chr11	134462218	134462219	chr11:134462219:C:A	rs4335562	C	A	C	SOX2_HMG_3	-15	0	-	0	0	.
chr11	134514471	134514472	chr11:134514472:G:C	rs79208916	G	C	G	SOX2_HMG_3	-5	0	+	0	0	.
chr11	134514492	134514493	chr11:134514493:G:C	rs10750572	G	C	C	SOX2_HMG_3	16	1	+	1.4756864617170664	-0.5241560331994771	AGGCAGTGCCAGTGAGG
chr11	134521698	134521699	chr11:134521699:C:T	rs12420612	C	T	C	SOX2_HMG_3	-14	0	-	0	0	.
chr11	134641315	134641316	chr11:134641316:C:A	rs11223922	C	A	T	SOX2_HMG_3	13	1	-	3.144863539253583	-3.763891240061637	GATCCATGGCAGTGGGT
chr11	134644852	134644853	chr11:134644853:A:G	rs3018010	A	G	G	SOX2_HMG_3	-2	0	-	0	0	.
chr11	134677381	134677382	chr11:134677382:G:A	rs61910800	G	A	G	SOX2_HMG_3	26	0	+	0	0	.
chr11	134741070	134741071	chr11:134741071:C:T	rs60622467	C	T	C	SOX2_HMG_3	18	0	+	0	0	.
chr11	134743267	134743268	chr11:134743268:C:T	chr11:134743268:C:T	C	T	C	SOX2_HMG_3	29	0	-	0	0	.
chr11	134743276	134743277	chr11:134743277:C:T	rs7934611	C	T	C	SOX2_HMG_3	20	0	-	0	0	.
chr11	134744288	134744289	chr11:134744289:T:G	rs12807834	T	G	T	SOX2_HMG_3	-10	0	+	0	0	.
chr11	134754776	134754777	chr11:134754777:A:G	rs10894870	A	G	A	SOX2_HMG_3	1	1	-	5.749600325485932	5.749600325485932	GTACAATTGCAGTGAAT
chr11	134994644	134994645	chr11:134994645:A:G	chr11:134994645:A:G	A	G	.	SOX2_HMG_3	-13	0	+	0	0	.
chr11	134994658	134994659	chr11:134994659:G:A	rs76048371	G	A	.	SOX2_HMG_3	1	1	+	3.6994365648740617	5.531084154953353	AGACAATGCTATTCAGG
chr11	135033688	135033689	chr11:135033689:C:T	rs12575376	C	T	c	SOX2_HMG_3	26	0	+	0	0	.
chr12	49219	49220	chr12:49220:C:A	rs11061693	C	A	.	SOX2_HMG_3	13	1	+	4.567350158317959	4.567350158317959	TATCAATGGAATTCTTC
chr12	54049	54050	chr12:54050:C:T	rs901013837	C	T	.	SOX2_HMG_3	8	1	+	2.3253469683881116	3.1970833210239746	CCTCAAAGCCAGTGTTA
chr12	119781	119782	chr12:119782:C:G	rs10849572	C	G	.	SOX2_HMG_3	-5	0	-	0	0	.
chr12	240539	240540	chr12:240540:A:C	rs61906962	A	C	A	SOX2_HMG_3	-4	0	+	0	0	.
chr12	402207	402208	chr12:402208:T:C	rs78985787	T	C	T	SOX2_HMG_3	19	0	-	0	0	.
chr12	548237	548238	chr12:548238:G:A	rs11063529	G	A	G	SOX2_HMG_3	35	0	-	0	0	.
chr12	1307425	1307426	chr12:1307426:C:T	rs16928347	C	T	T	SOX2_HMG_3	11	1	-	5.192069321437794	-0.08354220757460484	ACTCAATTTCAGTGTGC
chr12	1521388	1521389	chr12:1521389:A:G	rs12810561	A	G	A	SOX2_HMG_3	15	1	-	2.7690545006350247	-0.07365465554183315	GGTCAATGAAATGGTTC
chr12	1668105	1668106	chr12:1668106:G:A	rs11612778	G	A	G	SOX2_HMG_3	30	0	+	0	0	.
chr12	1802221	1802222	chr12:1802222:T:C	rs73043810	T	C	T	SOX2_HMG_3	19	0	-	0	0	.
chr12	1928139	1928140	chr12:1928140:C:T	rs117828485	C	T	C	SOX2_HMG_3	29	0	+	0	0	.
chr12	1955467	1955468	chr12:1955468:A:G	rs35252166	A	G	A	SOX2_HMG_3	22	0	-	0	0	.
chr12	2244240	2244241	chr12:2244241:C:A	rs77175673	C	A	C	SOX2_HMG_3	22	0	+	0	0	.
chr12	2304436	2304437	chr12:2304437:C:A	rs112809974	C	A	A	SOX2_HMG_3	-19	0	-	0	0	.
chr12	2318423	2318424	chr12:2318424:C:T	rs141094695	C	T	C	SOX2_HMG_3	-9	0	+	0	0	.
chr12	2328999	2329000	chr12:2329000:G:A	rs2239049	G	A	G	SOX2_HMG_3	-16	0	+	0	0	.
chr12	2676294	2676295	chr12:2676295:T:C	rs11062310	T	C	C	SOX2_HMG_3	1	1	-	6.323333594325858	4.491686004246565	CATCCATAGCAGTGATG
chr12	2782269	2782270	chr12:2782270:T:A	rs6489400	T	A	T	SOX2_HMG_3	-9	0	-	0	0	.
chr12	3003957	3003958	chr12:3003958:A:G	rs3825362	A	G	A	SOX2_HMG_3	6	1	-	2.15686155718329	-4.7518932221319305	GGGCCATGGCAGTGAGA
chr12	3003972	3003973	chr12:3003973:C:T	rs11613745	C	T	C	SOX2_HMG_3	-9	0	-	0	0	.
chr12	3122776	3122777	chr12:3122777:T:C	rs7955810	T	C	C	SOX2_HMG_3	-7	0	+	0	0	.
chr12	3219244	3219245	chr12:3219245:T:C	rs73043504	T	C	C	SOX2_HMG_3	-9	0	+	0	0	.
chr12	3230263	3230264	chr12:3230264:C:T	rs3782813	C	T	C	SOX2_HMG_3	8	1	+	3.1430120709523677	4.01474842358823	GATGAATGCTTTTGAAG
chr12	3238458	3238459	chr12:3238459:G:A	rs79901044	G	A	G	SOX2_HMG_3	1	1	+	6.3045745538487	8.136222143927991	CGTGAATGTCATTGAGT
chr12	3255569	3255570	chr12:3255570:C:T	rs76805954	C	T	C	SOX2_HMG_3	-15	0	+	0	0	.
chr12	3313169	3313170	chr12:3313170:T:A	rs116744312	T	A	T	SOX2_HMG_3	6	1	+	2.8257030441444417	-4.083051735170779	GCTCCATGACAGTGACA
chr12	3343352	3343353	chr12:3343353:A:C	rs7968638	A	C	A	SOX2_HMG_3	35	0	+	0	0	.
chr12	3482765	3482766	chr12:3482766:G:A	rs2878579	G	A	G	SOX2_HMG_3	25	0	-	0	0	.
chr12	3535414	3535415	chr12:3535415:G:A	rs578011616	G	A	G	SOX2_HMG_3	23	0	-	0	0	.
chr12	3535432	3535433	chr12:3535433:T:G	rs11062710	T	G	T	SOX2_HMG_3	5	1	-	3.623688285587559	-3.2850664937276615	TGTCAATACTTGTGATT
chr12	4136746	4136747	chr12:4136747:T:A	rs117650926	T	A	T	SOX2_HMG_3	-13	0	-	0	0	.
chr12	4330436	4330437	chr12:4330437:T:C	rs11063085	T	C	T	SOX2_HMG_3	-5	0	+	0	0	.
chr12	4418155	4418156	chr12:4418156:C:T	rs2160875	C	T	C	SOX2_HMG_3	-8	0	+	0	0	.
chr12	4649621	4649622	chr12:4649622:A:G	rs2270134	A	G	A	SOX2_HMG_3	10	1	+	3.231079355300027	-3.6776754240151925	GCACAATGGAAATGATA
chr12	4836848	4836849	chr12:4836849:T:C	rs7955352	T	C	C	SOX2_HMG_3	30	0	-	0	0	.
chr12	4857047	4857048	chr12:4857048:G:A	rs4631963	G	A	A	SOX2_HMG_3	30	0	+	0	0	.
chr12	4908777	4908778	chr12:4908778:G:C	rs78057813	G	C	G	SOX2_HMG_3	-15	0	+	0	0	.
chr12	4947368	4947369	chr12:4947369:G:A	rs7955054	G	A	G	SOX2_HMG_3	20	0	+	0	0	.
chr12	5189350	5189351	chr12:5189351:C:T	rs2159601	C	T	C	SOX2_HMG_3	34	0	+	0	0	.
chr12	5492762	5492763	chr12:5492763:G:A	rs6489629	G	A	A	SOX2_HMG_3	-19	0	-	0	0	.
chr12	5566605	5566606	chr12:5566606:G:A	rs79121802	G	A	G	SOX2_HMG_3	11	1	+	4.747702253469652	-0.5279092755427464	AAGCAATGATAGTGGCT
chr12	5807236	5807237	chr12:5807237:C:T	rs71579288	C	T	T	SOX2_HMG_3	15	1	-	3.967684249657319	4.40015783120822	TTTCAGTGGCAGTGAGA
chr12	5807267	5807268	chr12:5807268:A:C	rs71579287	A	C	c	SOX2_HMG_3	-16	0	-	0	0	.
chr12	6121279	6121280	chr12:6121280:G:A	rs2229443	G	A	G	SOX2_HMG_3	28	0	+	0	0	.
chr12	6171417	6171418	chr12:6171418:A:G	rs10744699	A	G	a	SOX2_HMG_3	-3	0	-	0	0	.
chr12	6556671	6556672	chr12:6556672:C:T	rs570885827	C	T	C	SOX2_HMG_3	-10	0	-	0	0	.
chr12	6684822	6684823	chr12:6684823:A:G	rs74057085	A	G	A	SOX2_HMG_3	-7	0	-	0	0	.
chr12	6725901	6725902	chr12:6725902:A:G	rs7487866	A	G	A	SOX2_HMG_3	24	0	+	0	0	.
chr12	7064315	7064316	chr12:7064316:C:T	rs7965055	C	T	C	SOX2_HMG_3	16	1	-	7.76086039291917	7.487172776528898	CACCAATGAAATTGTTG
chr12	7083439	7083440	chr12:7083440:T:G	rs949843424	T	G	t	SOX2_HMG_3	28	0	+	0	0	.
chr12	7571841	7571842	chr12:7571842:T:C	rs11054513	T	C	T	SOX2_HMG_3	12	1	+	4.1186360686131795	-2.79011871070204	CTTGAATGCTAGTGATC
chr12	7584728	7584729	chr12:7584729:T:C	rs2377089	T	C	T	SOX2_HMG_3	16	1	-	5.9121929650502505	6.1858805814405216	CTTCAATGATGTTGAAA
chr12	7608776	7608777	chr12:7608777:A:C	rs1419976	A	C	A	SOX2_HMG_3	12	1	-	1.9648267085219602	-4.943928070793259	CATCAACTGTAGTGGGG
chr12	7679850	7679851	chr12:7679851:A:C	rs7979377	A	C	C	SOX2_HMG_3	-5	0	-	0	0	.
chr12	7679865	7679866	chr12:7679866:G:A	rs7962576	G	A	A	SOX2_HMG_3	-20	0	-	0	0	.
chr12	7832721	7832722	chr12:7832722:C:A	rs10846018	C	A	C	SOX2_HMG_3	18	0	-	0	0	.
chr12	7907245	7907246	chr12:7907246:T:C	chr12:7907246:T:C	T	C	T	SOX2_HMG_3	-18	0	+	0	0	.
chr12	7915766	7915767	chr12:7915767:T:C	rs117198832	T	C	T	SOX2_HMG_3	18	0	+	0	0	.
chr12	8389019	8389020	chr12:8389020:T:C	rs149903928	T	C	.	SOX2_HMG_3	5	1	-	4.728523931031106	-2.1802308482841157	TTACAATGGCAGTGTAA
chr12	8449827	8449828	chr12:8449828:T:A	rs11045398	T	A	.	SOX2_HMG_3	-7	0	-	0	0	.
chr12	9367690	9367691	chr12:9367691:A:T	rs7300552	A	T	a	SOX2_HMG_3	5	1	+	1.7540393365624467	-5.1547154427527735	GATCAAGGGTAGTAAGA
chr12	9700994	9700995	chr12:9700995:A:G	rs61915472	A	G	A	SOX2_HMG_3	33	0	+	0	0	.
chr12	9706566	9706567	chr12:9706567:G:A	rs921875987	G	A	G	SOX2_HMG_3	-3	0	+	0	0	.
chr12	9971933	9971934	chr12:9971934:T:C	rs1797526	T	C	-	SOX2_HMG_3	6	1	+	5.130218572859708	-1.7785362064555128	ACTCAATATAATTGGGA
chr12	10170217	10170218	chr12:10170218:T:C	rs2742114	T	C	.	SOX2_HMG_3	-6	0	+	0	0	.
chr12	10311417	10311418	chr12:10311418:T:A	rs17206564	T	A	T	SOX2_HMG_3	-5	0	-	0	0	.
chr12	10555400	10555401	chr12:10555401:A:G	chr12:10555401:A:G	A	G	A	SOX2_HMG_3	-1	0	+	0	0	.
chr12	10750120	10750121	chr12:10750121:C:A	rs114947808	C	A	C	SOX2_HMG_3	11	1	-	3.0282869653922613	4.44536693461221	AGGCAATGACGGTGATG
chr12	11127134	11127135	chr12:11127135:G:A	rs201366803	G	A	G	SOX2_HMG_3	29	0	+	0	0	.
chr12	11963199	11963200	chr12:11963200:T:A	rs10772516	T	A	T	SOX2_HMG_3	34	0	+	0	0	.
chr12	12099178	12099179	chr12:12099179:T:G	rs367916967	T	G	T	SOX2_HMG_3	-1	0	+	0	0	.
chr12	12379996	12379997	chr12:12379997:C:T	rs117937426	C	T	C	SOX2_HMG_3	-4	0	+	0	0	.
chr12	12470856	12470857	chr12:12470857:C:T	rs2287204	C	T	C	SOX2_HMG_3	-17	0	+	0	0	.
chr12	12615474	12615475	chr12:12615475:A:G	rs61915599	A	G	A	SOX2_HMG_3	6	1	-	3.2943542241384467	-3.6144005551767755	CATCAATGGAATGGGGA
chr12	12894220	12894221	chr12:12894221:G:A	rs11055133	G	A	G	SOX2_HMG_3	30	0	+	0	0	.
chr12	12966113	12966114	chr12:12966114:C:T	rs1642197	C	T	T	SOX2_HMG_3	-11	0	+	0	0	.
chr12	12983553	12983554	chr12:12983554:C:T	rs735688	C	T	C	SOX2_HMG_3	15	1	-	6.345196172281818	6.777669753832718	AAGCAATGTTAATGAGA
chr12	13081900	13081901	chr12:13081901:G:A	rs923777821	G	A	G	SOX2_HMG_3	-1	0	-	0	0	.
chr12	13174438	13174439	chr12:13174439:A:G	rs11055263	A	G	A	SOX2_HMG_3	-7	0	-	0	0	.
chr12	13190900	13190901	chr12:13190901:G:A	rs5010913	G	A	G	SOX2_HMG_3	-4	0	-	0	0	.
chr12	13204330	13204331	chr12:13204331:G:A	rs4597146	G	A	A	SOX2_HMG_3	5	1	-	2.6106121344110016	2.6106121344110016	GGCCACTGTTATTGTTG
chr12	13345446	13345447	chr12:13345447:C:T	rs10772655	C	T	C	SOX2_HMG_3	-20	0	-	0	0	.
chr12	13426384	13426385	chr12:13426385:G:A	rs7135520	G	A	G	SOX2_HMG_3	33	0	-	0	0	.
chr12	13431065	13431066	chr12:13431066:G:A	rs4763987	G	A	G	SOX2_HMG_3	-16	0	-	0	0	.
chr12	14235533	14235534	chr12:14235534:G:A	rs4763373	G	A	G	SOX2_HMG_3	25	0	+	0	0	.
chr12	14362769	14362770	chr12:14362770:C:T	rs7311765	C	T	T	SOX2_HMG_3	30	0	-	0	0	.
chr12	14411276	14411277	chr12:14411277:G:A	rs113137202	G	A	G	SOX2_HMG_3	3	1	-	4.316547851484292	-2.5922069278309285	TGGCAATGATATGGATA
chr12	14418879	14418880	chr12:14418880:G:A	rs7967823	G	A	A	SOX2_HMG_3	32	0	+	0	0	.
chr12	14766927	14766928	chr12:14766928:T:C	rs10846059	T	C	C	SOX2_HMG_3	10	1	-	5.174248832309063	-1.7345059470061575	AATAAATTACAGTGAAA
chr12	14766951	14766952	chr12:14766952:C:T	rs11837353	C	T	C	SOX2_HMG_3	-14	0	-	0	0	.
chr12	14834295	14834296	chr12:14834296:A:G	rs116844040	A	G	A	SOX2_HMG_3	23	0	+	0	0	.
chr12	14834297	14834298	chr12:14834298:A:G	rs2287227	A	G	A	SOX2_HMG_3	25	0	+	0	0	.
chr12	14858789	14858790	chr12:14858790:T:C	rs7971527	T	C	T	SOX2_HMG_3	-16	0	+	0	0	.
chr12	14962940	14962941	chr12:14962941:C:T	rs7968816	C	T	C	SOX2_HMG_3	7	1	-	3.211677981812041	0.4828908612507056	GATAAATGTTATGGAAT
chr12	15171696	15171697	chr12:15171697:T:C	rs12815540	T	C	T	SOX2_HMG_3	16	1	-	4.716665349496341	4.990352965886613	TTTTAATTTTATTGAAA
chr12	15330003	15330004	chr12:15330004:G:A	rs78483612	G	A	G	SOX2_HMG_3	7	1	+	2.404277771109408	-0.3245093494519269	TATCAAAGGCAATGAAG
chr12	15364444	15364445	chr12:15364445:T:G	rs56029389	T	G	G	SOX2_HMG_3	-8	0	-	0	0	.
chr12	15535112	15535113	chr12:15535113:A:T	rs144765680	A	T	A	SOX2_HMG_3	0	1	-	4.18415549356621	4.845957094240903	TCTCAATCTCAGTGAAT
chr12	15980235	15980236	chr12:15980236:A:C	rs141283490	A	C	A	SOX2_HMG_3	14	1	+	4.260979877327124	-2.571318828239569	AGTAAATATTATTGACA
chr12	15982491	15982492	chr12:15982492:A:G	rs7978593	A	G	A	SOX2_HMG_3	-13	0	-	0	0	.
chr12	16194373	16194374	chr12:16194374:G:A	rs3942536	G	A	G	SOX2_HMG_3	-3	0	+	0	0	.
chr12	16282202	16282203	chr12:16282203:T:A	rs16911788	T	A	T	SOX2_HMG_3	-2	0	-	0	0	.
chr12	16389906	16389907	chr12:16389907:T:C	rs1012536	T	C	C	SOX2_HMG_3	-18	0	+	0	0	.
chr12	17090227	17090228	chr12:17090228:C:T	rs994882	C	T	C	SOX2_HMG_3	11	1	-	4.01005422387323	-1.2655573051391675	ATTCAGTGGAAGTGAAA
chr12	17205754	17205755	chr12:17205755:A:G	rs1513050	A	G	A	SOX2_HMG_3	36	0	+	0	0	.
chr12	17225508	17225509	chr12:17225509:A:G	rs35473923	A	G	A	SOX2_HMG_3	2	1	-	7.18971691308619	2.186344842770602	AGTCAACTCTATTGATG
chr12	17433003	17433004	chr12:17433004:G:T	rs1163954	G	T	G	SOX2_HMG_3	22	0	-	0	0	.
chr12	17878890	17878891	chr12:17878891:G:T	rs11519181	G	T	G	SOX2_HMG_3	25	0	-	0	0	.
chr12	18040535	18040536	chr12:18040536:T:G	rs12833510	T	G	C	SOX2_HMG_3	36	0	-	0	0	.
chr12	18387444	18387445	chr12:18387445:G:A	rs12371012	G	A	A	SOX2_HMG_3	-3	0	-	0	0	.
chr12	18551073	18551074	chr12:18551074:A:G	rs12827361	A	G	A	SOX2_HMG_3	0	1	+	2.950525026697102	3.171119305782396	AATTAATGGTATTTAGA
chr12	18819669	18819670	chr12:18819670:G:A	rs3962579	G	A	G	SOX2_HMG_3	35	0	+	0	0	.
chr12	19233724	19233725	chr12:19233725:A:G	rs73347029	A	G	A	SOX2_HMG_3	8	1	-	3.1261691970592542	2.254432844423391	CAGCAATATTTGTGATA
chr12	19239367	19239368	chr12:19239368:G:C	rs118163426	G	C	G	SOX2_HMG_3	-17	0	+	0	0	.
chr12	19547417	19547418	chr12:19547418:A:C	chr12:19547418:A:C	A	C	A	SOX2_HMG_3	18	0	-	0	0	.
chr12	19641186	19641187	chr12:19641187:C:T	rs7313438	C	T	c	SOX2_HMG_3	15	1	-	2.8520607818488104	3.2845343633997115	GATGAATGTCATTGCGG
chr12	19695152	19695153	chr12:19695153:T:G	rs11044776	T	G	T	SOX2_HMG_3	20	0	+	0	0	.
chr12	19812003	19812004	chr12:19812004:A:G	rs2731592	A	G	A	SOX2_HMG_3	22	0	+	0	0	.
chr12	19886530	19886531	chr12:19886531:A:G	rs2417814	A	G	G	SOX2_HMG_3	1	1	+	6.424790986670686	4.593143396591394	CATAAATGTCATTGGTG
chr12	20038726	20038727	chr12:20038727:A:G	rs2417817	A	G	A	SOX2_HMG_3	2	1	-	7.193326376633737	2.189954306318151	TATCAATTTTATTAAAT
chr12	20249232	20249233	chr12:20249233:A:G	rs61911303	A	G	A	SOX2_HMG_3	3	1	+	5.28679149396927	5.28679149396927	GAAAAATGCAATTGATA
chr12	20342192	20342193	chr12:20342193:C:T	rs369515470	C	T	C	SOX2_HMG_3	-9	0	-	0	0	.
chr12	20457904	20457905	chr12:20457905:T:C	rs7487173	T	C	C	SOX2_HMG_3	-12	0	+	0	0	.
chr12	20494250	20494251	chr12:20494251:A:G	rs12308852	A	G	A	SOX2_HMG_3	12	1	+	4.945993368620134	4.945993368620134	ATTCAATTTTATAGAGA
chr12	20699313	20699314	chr12:20699314:A:C	rs17325179	A	C	A	SOX2_HMG_3	-11	0	-	0	0	.
chr12	20833126	20833127	chr12:20833127:A:G	rs12824927	A	G	A	SOX2_HMG_3	6	1	+	5.6286430285243245	5.6286430285243245	GTTCAAAGCTAGTGAAG
chr12	21170233	21170234	chr12:21170234:T:C	rs79546646	T	C	T	SOX2_HMG_3	16	1	-	3.7727223667433325	4.046409983133604	GTGCAATGCAATTGGAA
chr12	21305725	21305726	chr12:21305726:T:C	rs11838023	T	C	T	SOX2_HMG_3	11	1	+	6.953495339332656	0.26080384110030835	TATTAATGTCATTGTTT
chr12	21339002	21339003	chr12:21339003:A:T	rs2857468	A	T	A	SOX2_HMG_3	27	0	-	0	0	.
chr12	21672266	21672267	chr12:21672267:G:T	rs7133519	G	T	T	SOX2_HMG_3	30	0	+	0	0	.
chr12	21771601	21771602	chr12:21771602:T:C	rs767351726	T	C	T	SOX2_HMG_3	27	0	+	0	0	.
chr12	22310998	22310999	chr12:22310999:G:A	rs12321356	G	A	A	SOX2_HMG_3	-13	0	+	0	0	.
chr12	22827833	22827834	chr12:22827834:G:C	chr12:22827834:G:C	G	C	G	SOX2_HMG_3	-17	0	-	0	0	.
chr12	22879094	22879095	chr12:22879095:T:A	rs57132100	T	A	A	SOX2_HMG_3	10	1	-	2.5417359195873783	-4.367018859727841	AGTCACTGCTACTGATG
chr12	23108718	23108719	chr12:23108719:T:G	rs17361776	T	G	T	SOX2_HMG_3	26	0	+	0	0	.
chr12	23838382	23838383	chr12:23838383:C:T	rs9669660	C	T	C	SOX2_HMG_3	-19	0	+	0	0	.
chr12	24282041	24282042	chr12:24282042:A:C	rs775001	A	C	A	SOX2_HMG_3	20	0	+	0	0	.
chr12	24300518	24300519	chr12:24300519:G:A	rs565934	G	A	G	SOX2_HMG_3	25	0	-	0	0	.
chr12	24472242	24472243	chr12:24472243:C:T	rs11047466	C	T	C	SOX2_HMG_3	1	1	-	4.583724647209389	6.41537223728868	TGTCAATCCCAGTGAGA
chr12	24573678	24573679	chr12:24573679:C:T	rs3919954	C	T	C	SOX2_HMG_3	17	0	+	0	0	.
chr12	24770870	24770871	chr12:24770871:G:T	rs12305601	G	T	G	SOX2_HMG_3	-20	0	-	0	0	.
chr12	24813910	24813911	chr12:24813911:C:T	rs2353483	C	T	C	SOX2_HMG_3	7	1	-	2.143854892760058	-0.5849322278012777	AATCAATGGCATATAGA
chr12	24944671	24944672	chr12:24944672:C:T	rs2242399	C	T	C	SOX2_HMG_3	20	0	+	0	0	.
chr12	25023934	25023935	chr12:25023935:G:A	rs11047765	G	A	G	SOX2_HMG_3	19	0	-	0	0	.
chr12	25188188	25188189	chr12:25188189:A:C	rs11611468	A	C	A	SOX2_HMG_3	19	0	+	0	0	.
chr12	25243100	25243101	chr12:25243101:C:T	rs2970532	C	T	C	SOX2_HMG_3	-11	0	+	0	0	.
chr12	25251440	25251441	chr12:25251441:T:C	rs370324187	T	C	T	SOX2_HMG_3	31	0	-	0	0	.
chr12	25276805	25276806	chr12:25276806:G:C	rs10743554	G	C	C	SOX2_HMG_3	20	0	-	0	0	.
chr12	25276833	25276834	chr12:25276834:A:C	rs10743555	A	C	C	SOX2_HMG_3	-8	0	-	0	0	.
chr12	25276845	25276846	chr12:25276846:C:T	rs11047928	C	T	C	SOX2_HMG_3	-20	0	-	0	0	.
chr12	25327487	25327488	chr12:25327488:C:T	rs7970784	C	T	T	SOX2_HMG_3	30	0	-	0	0	.
chr12	25439428	25439429	chr12:25439429:C:T	rs12370230	C	T	C	SOX2_HMG_3	4	1	+	2.531618861672392	2.531618861672392	AATACATGTCAGTGATA
chr12	25439451	25439452	chr12:25439452:T:C	rs12371941	T	C	T	SOX2_HMG_3	27	0	+	0	0	.
chr12	25584055	25584056	chr12:25584056:G:A	rs1382856	G	A	G	SOX2_HMG_3	27	0	+	0	0	.
chr12	25718919	25718920	chr12:25718920:T:C	rs6487510	T	C	T	SOX2_HMG_3	16	1	-	5.378785464535524	5.652473080925796	GGGGAATGTCATTGATA
chr12	25760031	25760032	chr12:25760032:A:G	rs1462721	A	G	A	SOX2_HMG_3	26	0	-	0	0	.
chr12	25776497	25776498	chr12:25776498:C:G	rs12296851	C	G	C	SOX2_HMG_3	-1	0	-	0	0	.
chr12	25856241	25856242	chr12:25856242:A:T	rs1179590	A	T	T	SOX2_HMG_3	25	0	-	0	0	.
chr12	25979851	25979852	chr12:25979852:G:A	rs10842648	G	A	G	SOX2_HMG_3	-18	0	-	0	0	.
chr12	25997759	25997760	chr12:25997760:A:G	rs74071351	A	G	A	SOX2_HMG_3	30	0	-	0	0	.
chr12	26058738	26058739	chr12:26058739:T:G	rs7139241	T	G	T	SOX2_HMG_3	16	1	+	7.230663840746193	8.033734282522383	AATCAATCAAATTGAAT
chr12	26435332	26435333	chr12:26435333:G:T	rs7966599	G	T	G	SOX2_HMG_3	-10	0	-	0	0	.
chr12	26523814	26523815	chr12:26523815:T:C	rs10506001	T	C	T	SOX2_HMG_3	17	0	+	0	0	.
chr12	26563904	26563905	chr12:26563905:T:A	rs55861094	T	A	A	SOX2_HMG_3	31	0	-	0	0	.
chr12	26691931	26691932	chr12:26691932:C:T	rs111449975	C	T	C	SOX2_HMG_3	-5	0	-	0	0	.
chr12	26691935	26691936	chr12:26691936:T:C	rs11834048	T	C	T	SOX2_HMG_3	-9	0	-	0	0	.
chr12	26990574	26990575	chr12:26990575:G:A	rs10771314	G	A	G	SOX2_HMG_3	32	0	+	0	0	.
chr12	27003712	27003713	chr12:27003713:G:C	rs61923437	G	C	G	SOX2_HMG_3	-18	0	-	0	0	.
chr12	27049242	27049243	chr12:27049243:C:A	rs115041628	C	A	C	SOX2_HMG_3	29	0	+	0	0	.
chr12	27306613	27306614	chr12:27306614:T:G	rs4963689	T	G	T	SOX2_HMG_3	-3	0	+	0	0	.
chr12	27478911	27478912	chr12:27478912:G:T	rs439865	G	T	G	SOX2_HMG_3	20	0	+	0	0	.
chr12	27516915	27516916	chr12:27516916:C:T	rs421522	C	T	C	SOX2_HMG_3	20	0	+	0	0	.
chr12	27842113	27842114	chr12:27842114:G:T	rs11049193	G	T	G	SOX2_HMG_3	36	0	-	0	0	.
chr12	28512425	28512426	chr12:28512426:C:T	rs11049684	C	T	C	SOX2_HMG_3	-9	0	-	0	0	.
chr12	28698712	28698713	chr12:28698713:A:G	rs76618426	A	G	A	SOX2_HMG_3	12	1	-	2.4630113879398614	-4.445743391375359	CATAATTGTCATTGAAG
chr12	28934298	28934299	chr12:28934299:T:C	rs1844257	T	C	C	SOX2_HMG_3	-2	0	-	0	0	.
chr12	29255005	29255006	chr12:29255006:G:C	rs10743651	G	C	C	SOX2_HMG_3	13	1	+	8.872417923411946	1.9636631440967254	TATCAATGATTGTGATG
chr12	29306798	29306799	chr12:29306799:G:A	rs7954871	G	A	G	SOX2_HMG_3	-8	0	+	0	0	.
chr12	29317003	29317004	chr12:29317004:G:A	rs75418976	G	A	G	SOX2_HMG_3	-20	0	+	0	0	.
chr12	29415344	29415345	chr12:29415345:T:C	rs1436315	T	C	T	SOX2_HMG_3	9	1	+	7.506303814125202	6.699633680188156	GCTAAATGGTATTGAAA
chr12	29543237	29543238	chr12:29543238:C:G	rs12426386	C	G	C	SOX2_HMG_3	-8	0	+	0	0	.
chr12	29625386	29625387	chr12:29625387:G:T	rs7134882	G	T	G	SOX2_HMG_3	-11	0	+	0	0	.
chr12	29641058	29641059	chr12:29641059:T:C	rs10431221	T	C	C	SOX2_HMG_3	-13	0	-	0	0	.
chr12	29673351	29673352	chr12:29673352:G:C	rs741614	G	C	G	SOX2_HMG_3	-14	0	+	0	0	.
chr12	29675824	29675825	chr12:29675825:A:T	rs10743669	A	T	A	SOX2_HMG_3	11	1	-	5.477990817648375	-1.2147006805839722	GAACAATGCTATTAAGA
chr12	29675833	29675834	chr12:29675834:T:C	rs10771568	T	C	T	SOX2_HMG_3	2	1	-	5.477990817648375	5.477990817648375	GAACAATGCTATTAAGA
chr12	29715176	29715177	chr12:29715177:T:C	rs302376	T	C	T	SOX2_HMG_3	5	1	-	4.8539943275450055	-2.054760451770215	CTTCAATTTTGTTGAAA
chr12	29885109	29885110	chr12:29885110:C:T	rs12227846	C	T	C	SOX2_HMG_3	-13	0	+	0	0	.
chr12	29898279	29898280	chr12:29898280:T:C	rs75601993	T	C	T	SOX2_HMG_3	5	1	-	5.791824851195296	-1.1169299281199265	ATTCAAGAGTATTGATA
chr12	30344195	30344196	chr12:30344196:G:C	rs10843724	G	C	C	SOX2_HMG_3	-10	0	+	0	0	.
chr12	31026649	31026650	chr12:31026650:T:C	rs2287454	T	C	t	SOX2_HMG_3	5	1	-	3.8052875940287776	-3.103467185286443	GGACAATGCAATTGCTG
chr12	31086398	31086399	chr12:31086399:T:C	rs4012619	T	C	T	SOX2_HMG_3	0	1	-	3.2198384900938617	3.4404327691791554	ACTCGATTTTATTGAGC
chr12	31123935	31123936	chr12:31123936:T:G	rs4931441	T	G	.	SOX2_HMG_3	36	0	+	0	0	.
chr12	31175813	31175814	chr12:31175814:C:G	rs34016579	C	G	.	SOX2_HMG_3	-6	0	+	0	0	.
chr12	31215779	31215780	chr12:31215780:C:T	rs148727343	C	T	.	SOX2_HMG_3	35	0	-	0	0	.
chr12	31488341	31488342	chr12:31488342:A:T	rs75820292	A	T	A	SOX2_HMG_3	-4	0	+	0	0	.
chr12	31488364	31488365	chr12:31488365:C:T	rs78557843	C	T	C	SOX2_HMG_3	19	0	+	0	0	.
chr12	31522020	31522021	chr12:31522021:T:A	rs76952346	T	A	T	SOX2_HMG_3	-14	0	-	0	0	.
chr12	31853805	31853806	chr12:31853806:C:T	rs111744397	C	T	C	SOX2_HMG_3	17	0	-	0	0	.
chr12	32047902	32047903	chr12:32047903:G:C	rs1684126	G	C	C	SOX2_HMG_3	-4	0	-	0	0	.
chr12	32245382	32245383	chr12:32245383:A:G	rs326639	A	G	A	SOX2_HMG_3	10	1	+	6.223234799922953	-0.6855199793922668	GCTCAATTCAAGTGACT
chr12	32660905	32660906	chr12:32660906:T:C	rs115400730	T	C	T	SOX2_HMG_3	-16	0	-	0	0	.
chr12	32777602	32777603	chr12:32777603:G:A	rs7959288	G	A	G	SOX2_HMG_3	-1	0	+	0	0	.
chr12	32780102	32780103	chr12:32780103:A:G	rs7977414	A	G	G	SOX2_HMG_3	28	0	-	0	0	.
chr12	32801350	32801351	chr12:32801351:C:T	rs56798911	C	T	T	SOX2_HMG_3	7	1	-	8.20408491837189	5.4752977978105575	CTTCAATGGCAGTGTAT
chr12	33057848	33057849	chr12:33057849:C:T	rs17553894	C	T	C	SOX2_HMG_3	-8	0	+	0	0	.
chr12	33640934	33640935	chr12:33640935:G:A	rs75180006	G	A	G	SOX2_HMG_3	31	0	+	0	0	.
chr12	34022365	34022366	chr12:34022366:C:T	rs12372721	C	T	C	SOX2_HMG_3	3	1	+	4.115747635784206	-2.793007143531012	GGGCAATGCGATTGAGA
chr12	38393199	38393200	chr12:38393200:G:A	rs6582675	G	A	G	SOX2_HMG_3	35	0	-	0	0	.
chr12	38409839	38409840	chr12:38409840:T:C	rs188007539	T	C	T	SOX2_HMG_3	-19	0	+	0	0	.
chr12	38661862	38661863	chr12:38661863:A:T	rs77598568	A	T	A	SOX2_HMG_3	5	1	+	4.673169445188305	-2.2355853341269167	AATCAATAAATGTGATA
chr12	39451550	39451551	chr12:39451551:T:G	rs11172174	T	G	G	SOX2_HMG_3	17	0	-	0	0	.
chr12	39886149	39886150	chr12:39886150:G:C	rs2029971	G	C	G	SOX2_HMG_3	32	0	+	0	0	.
chr12	39914170	39914171	chr12:39914171:G:A	rs10877772	G	A	G	SOX2_HMG_3	30	0	+	0	0	.
chr12	40107319	40107320	chr12:40107320:G:A	rs4768213	G	A	G	SOX2_HMG_3	-20	0	-	0	0	.
chr12	40287602	40287603	chr12:40287603:C:A	chr12:40287603:C:A	C	A	C	SOX2_HMG_3	-8	0	-	0	0	.
chr12	40438358	40438359	chr12:40438359:T:C	rs11176635	T	C	T	SOX2_HMG_3	-8	0	+	0	0	.
chr12	40650356	40650357	chr12:40650357:C:T	rs66524047	C	T	C	SOX2_HMG_3	-10	0	+	0	0	.
chr12	40972352	40972353	chr12:40972353:A:G	rs10879443	A	G	G	SOX2_HMG_3	23	0	+	0	0	.
chr12	41012201	41012202	chr12:41012202:G:A	rs73116984	G	A	G	SOX2_HMG_3	13	1	+	0.9473692026254007	-5.961385576689819	GATCAAGGGCAGAGAGA
chr12	41201786	41201787	chr12:41201787:C:T	rs1431107	C	T	T	SOX2_HMG_3	-19	0	+	0	0	.
chr12	41247947	41247948	chr12:41247948:A:G	rs80236956	A	G	A	SOX2_HMG_3	18	0	+	0	0	.
chr12	41439914	41439915	chr12:41439915:G:C	rs1458168	G	C	G	SOX2_HMG_3	13	1	+	3.8921379206081865	-3.0166168587070343	CTTCTATTTTATTGAGT
chr12	41565049	41565050	chr12:41565050:A:G	rs7973550	A	G	A	SOX2_HMG_3	24	0	-	0	0	.
chr12	41748241	41748242	chr12:41748242:T:C	rs7968296	T	C	T	SOX2_HMG_3	-7	0	-	0	0	.
chr12	41801961	41801962	chr12:41801962:G:A	rs1497159	G	A	G	SOX2_HMG_3	22	0	+	0	0	.
chr12	42266626	42266627	chr12:42266627:T:C	rs114771179	T	C	T	SOX2_HMG_3	30	0	+	0	0	.
chr12	42985554	42985555	chr12:42985555:T:C	rs117228757	T	C	T	SOX2_HMG_3	-11	0	+	0	0	.
chr12	42999581	42999582	chr12:42999582:A:T	rs75673656	A	T	A	SOX2_HMG_3	2	1	-	3.069540502270239	-0.7980743324078017	GATCAATGCATTTGTCT
chr12	43098552	43098553	chr12:43098553:G:A	rs1656532	G	A	A	SOX2_HMG_3	35	0	-	0	0	.
chr12	43198059	43198060	chr12:43198060:C:A	rs10880433	C	A	C	SOX2_HMG_3	3	1	+	4.212367183218791	-2.69638759609643	AGCCAATAGTAGTGTTT
chr12	43208807	43208808	chr12:43208808:A:C	chr12:43208808:A:C	A	C	A	SOX2_HMG_3	19	0	-	0	0	.
chr12	43333221	43333222	chr12:43333222:G:A	rs10880457	G	A	A	SOX2_HMG_3	27	0	-	0	0	.
chr12	43586254	43586255	chr12:43586255:C:T	rs957216	C	T	C	SOX2_HMG_3	16	1	+	6.594533498076913	7.791305551217267	TGACAATGTCAGTGAGC
chr12	43588069	43588070	chr12:43588070:A:G	rs74081931	A	G	A	SOX2_HMG_3	-16	0	+	0	0	.
chr12	43896741	43896742	chr12:43896742:A:G	rs1675789	A	G	A	SOX2_HMG_3	7	1	-	4.839529358369818	0.15139765166737973	AGTCAACTGTAGTGAGG
chr12	44054045	44054046	chr12:44054046:A:C	rs11182405	A	C	C	SOX2_HMG_3	10	1	+	6.60054458563086	-0.30821019368436153	GATCAAAGAAATTGTTG
chr12	44218332	44218333	chr12:44218333:C:A	rs61228557	C	A	A	SOX2_HMG_3	-9	0	+	0	0	.
chr12	44755517	44755518	chr12:44755518:C:A	rs11182640	C	A	C	SOX2_HMG_3	-16	0	-	0	0	.
chr12	45217818	45217819	chr12:45217819:A:G	rs3759080	A	G	G	SOX2_HMG_3	2	1	-	10.087042546441293	5.083670476125704	TGTCAATTTTATTGTAA
chr12	45458536	45458537	chr12:45458537:T:C	rs149263324	T	C	T	SOX2_HMG_3	12	1	+	3.0237055583575185	-3.885049220957701	AATCAAAGATAATGAAG
chr12	46134262	46134263	chr12:46134263:A:T	rs1550738	A	T	A	SOX2_HMG_3	4	1	+	6.849379351864352	-0.05937542745086849	GATTAATGACATTGTTT
chr12	46875477	46875478	chr12:46875478:T:C	rs74082953	T	C	T	SOX2_HMG_3	34	0	+	0	0	.
chr12	47424825	47424826	chr12:47424826:C:A	rs7296045	C	A	C	SOX2_HMG_3	21	0	+	0	0	.
chr12	47570399	47570400	chr12:47570400:C:G	rs12822159	C	G	C	SOX2_HMG_3	21	0	+	0	0	.
chr12	47570401	47570402	chr12:47570402:G:A	rs55948459	G	A	G	SOX2_HMG_3	23	0	+	0	0	.
chr12	47943845	47943846	chr12:47943846:C:T	rs3923693	C	T	T	SOX2_HMG_3	-18	0	-	0	0	.
chr12	49098183	49098184	chr12:49098184:G:C	rs11834944	G	C	G	SOX2_HMG_3	29	0	-	0	0	.
chr12	49208421	49208422	chr12:49208422:A:G	rs10875934	A	G	A	SOX2_HMG_3	28	0	-	0	0	.
chr12	49784979	49784980	chr12:49784980:C:G	rs79220547	C	G	C	SOX2_HMG_3	-10	0	+	0	0	.
chr12	49874763	49874764	chr12:49874764:T:A	rs917374570	T	A	T	SOX2_HMG_3	14	1	+	3.6640148026438046	6.376788647458098	CATAAATGCCAGTGTGA
chr12	50143276	50143277	chr12:50143277:C:G	rs2277355	C	G	G	SOX2_HMG_3	-8	0	-	0	0	.
chr12	50506322	50506323	chr12:50506323:T:C	rs11614212	T	C	T	SOX2_HMG_3	-18	0	-	0	0	.
chr12	50529921	50529922	chr12:50529922:A:G	rs67092086	A	G	A	SOX2_HMG_3	15	1	-	4.754794044941028	1.91208488876417	ATTCAATTTAATGGATA
chr12	50671833	50671834	chr12:50671834:T:C	rs2684908	T	C	T	SOX2_HMG_3	22	0	+	0	0	.
chr12	50765356	50765357	chr12:50765357:A:G	rs12424860	A	G	A	SOX2_HMG_3	-2	0	-	0	0	.
chr12	51032053	51032054	chr12:51032054:G:A	rs7488909	G	A	G	SOX2_HMG_3	21	0	+	0	0	.
chr12	51199832	51199833	chr12:51199833:T:G	rs4077093	T	G	G	SOX2_HMG_3	12	1	+	2.826009701528168	-4.082745077787052	TGGCAATGGCAGTGGCA
chr12	51730933	51730934	chr12:51730934:C:A	rs393897	C	A	A	SOX2_HMG_3	-4	0	-	0	0	.
chr12	51806957	51806958	chr12:51806958:C:A	rs60637	C	A	C	SOX2_HMG_3	13	1	-	8.074552516062132	1.1657977367469112	GCTCAATGGTATTGGGC
chr12	52058304	52058305	chr12:52058305:C:T	rs17126257	C	T	C	SOX2_HMG_3	-12	0	-	0	0	.
chr12	52123907	52123908	chr12:52123908:T:C	rs148606307	T	C	T	SOX2_HMG_3	-7	0	-	0	0	.
chr12	52189819	52189820	chr12:52189820:G:T	rs11170034	G	T	G	SOX2_HMG_3	3	1	-	3.5458342915732097	-3.36292048774201	GGGCAATGCCCTTGAAG
chr12	52189836	52189837	chr12:52189837:C:T	rs73311405	C	T	C	SOX2_HMG_3	-14	0	-	0	0	.
chr12	52218321	52218322	chr12:52218322:A:G	rs10747634	A	G	G	SOX2_HMG_3	11	1	-	2.8585259856219745	-3.8341655126103724	CATCAATGGTGTTAAAA
chr12	52258036	52258037	chr12:52258037:G:T	rs1902765	G	T	G	SOX2_HMG_3	19	0	+	0	0	.
chr12	52322737	52322738	chr12:52322738:G:A	rs17656443	G	A	G	SOX2_HMG_3	33	0	+	0	0	.
chr12	52608912	52608913	chr12:52608913:G:A	rs78076535	G	A	G	SOX2_HMG_3	1	1	-	1.9053713504982042	1.9053713504982042	CCTCAATGGGAGTGGAG
chr12	52652602	52652603	chr12:52652603:A:T	rs640027	A	T	a	SOX2_HMG_3	29	0	+	0	0	.
chr12	52708411	52708412	chr12:52708412:C:A	rs678069	C	A	C	SOX2_HMG_3	34	0	+	0	0	.
chr12	53321594	53321595	chr12:53321595:G:A	rs149864679	G	A	G	SOX2_HMG_3	-3	0	+	0	0	.
chr12	53327666	53327667	chr12:53327667:A:C	rs112778209	A	C	A	SOX2_HMG_3	19	0	-	0	0	.
chr12	53441250	53441251	chr12:53441251:G:T	rs11170558	G	T	G	SOX2_HMG_3	34	0	+	0	0	.
chr12	53728288	53728289	chr12:53728289:G:A	rs17102221	G	A	G	SOX2_HMG_3	26	0	+	0	0	.
chr12	53990419	53990420	chr12:53990420:A:G	rs7302243	A	G	A	SOX2_HMG_3	16	1	+	3.935642841272286	4.209330457662557	GTTTAATGTAAGTGAGA
chr12	54013505	54013506	chr12:54013506:C:T	rs11170785	C	T	C	SOX2_HMG_3	-2	0	-	0	0	.
chr12	54013512	54013513	chr12:54013513:A:G	rs4759317	A	G	G	SOX2_HMG_3	-9	0	-	0	0	.
chr12	54142674	54142675	chr12:54142675:T:C	rs7970400	T	C	C	SOX2_HMG_3	10	1	-	2.9048800273912154	-4.003874751924004	CCACAATACAAGTGAGG
chr12	54280547	54280548	chr12:54280548:A:C	rs530476071	A	C	A	SOX2_HMG_3	-19	0	-	0	0	.
chr12	54933578	54933579	chr12:54933579:G:C	rs559546193	G	C	G	SOX2_HMG_3	-15	0	-	0	0	.
chr12	55038205	55038206	chr12:55038206:C:T	rs2633414	C	T	T	SOX2_HMG_3	22	0	-	0	0	.
chr12	55245468	55245469	chr12:55245469:A:G	rs56793916	A	G	A	SOX2_HMG_3	18	0	+	0	0	.
chr12	55373283	55373284	chr12:55373284:T:C	rs10876753	T	C	-	SOX2_HMG_3	-9	0	-	0	0	.
chr12	55631406	55631407	chr12:55631407:A:G	rs2550670	A	G	A	SOX2_HMG_3	30	0	-	0	0	.
chr12	55712147	55712148	chr12:55712148:A:C	rs78694778	A	C	A	SOX2_HMG_3	-2	0	+	0	0	.
chr12	55906353	55906354	chr12:55906354:T:C	rs77858935	T	C	T	SOX2_HMG_3	31	0	+	0	0	.
chr12	56628886	56628887	chr12:56628887:G:A	rs548977400	G	A	g	SOX2_HMG_3	-15	0	-	0	0	.
chr12	56644803	56644804	chr12:56644804:T:C	chr12:56644804:T:C	T	C	T	SOX2_HMG_3	30	0	-	0	0	.
chr12	56644845	56644846	chr12:56644846:A:G	chr12:56644846:A:G	A	G	A	SOX2_HMG_3	-12	0	-	0	0	.
chr12	57011718	57011719	chr12:57011719:A:G	rs74808980	A	G	A	SOX2_HMG_3	6	1	-	3.754936010156893	-3.1538187691583284	GAAAAATGAAAGTGATA
chr12	58162950	58162951	chr12:58162951:T:C	rs11172479	T	C	T	SOX2_HMG_3	13	1	-	2.872304032439871	9.781058811755091	CTGCAATGTTATTAAGG
chr12	58500624	58500625	chr12:58500625:C:T	rs11172635	C	T	C	SOX2_HMG_3	-7	0	-	0	0	.
chr12	58529441	58529442	chr12:58529442:T:C	chr12:58529442:T:C	T	C	T	SOX2_HMG_3	-16	0	+	0	0	.
chr12	58529462	58529463	chr12:58529463:A:G	rs146051200	A	G	A	SOX2_HMG_3	5	1	+	6.897978608135919	-0.01077617117930213	GTTCAATGTTAATGAGT
chr12	58529470	58529471	chr12:58529471:G:C	rs112759887	G	C	G	SOX2_HMG_3	13	1	+	6.897978608135919	-0.010776171179301686	GTTCAATGTTAATGAGT
chr12	58529481	58529482	chr12:58529482:A:G	rs3913103	A	G	A	SOX2_HMG_3	24	0	+	0	0	.
chr12	58552625	58552626	chr12:58552626:T:A	rs3847751	T	A	T	SOX2_HMG_3	20	0	-	0	0	.
chr12	58557291	58557292	chr12:58557292:G:A	rs80347972	G	A	G	SOX2_HMG_3	-2	0	+	0	0	.
chr12	58602971	58602972	chr12:58602972:A:T	rs7299125	A	T	T	SOX2_HMG_3	5	1	+	5.798515407652911	-1.1102393716623087	CAGCAAGGGCATTGATT
chr12	58862074	58862075	chr12:58862075:A:G	rs11533605	A	G	A	SOX2_HMG_3	-12	0	-	0	0	.
chr12	59337095	59337096	chr12:59337096:A:G	rs11836800	A	G	A	SOX2_HMG_3	28	0	-	0	0	.
chr12	59597710	59597711	chr12:59597711:G:C	rs974459	G	C	C	SOX2_HMG_3	-11	0	+	0	0	.
chr12	59828838	59828839	chr12:59828839:A:G	rs11173174	A	G	G	SOX2_HMG_3	-13	0	+	0	0	.
chr12	59828861	59828862	chr12:59828862:A:G	rs11173175	A	G	A	SOX2_HMG_3	10	1	+	8.906588988573052	1.9978342092578316	AATCAAATATATTGATG
chr12	60335940	60335941	chr12:60335941:A:G	rs186208089	A	G	A	SOX2_HMG_3	30	0	+	0	0	.
chr12	60685010	60685011	chr12:60685011:T:C	rs166659	T	C	C	SOX2_HMG_3	0	1	+	4.147000772722534	4.284329750771199	TATCTATTTTAGTGAGC
chr12	60775998	60775999	chr12:60775999:G:A	chr12:60775999:G:A	G	A	G	SOX2_HMG_3	11	1	+	4.962001798789917	-0.3136097302224816	GGTCAATGTTAGAGTAG
chr12	60799101	60799102	chr12:60799102:G:A	rs12316933	G	A	G	SOX2_HMG_3	8	1	+	7.169419678599533	6.320375731235904	CATCAATGGCAATGTTT
chr12	61308323	61308324	chr12:61308324:C:T	rs2731401	C	T	C	SOX2_HMG_3	33	0	-	0	0	.
chr12	61369166	61369167	chr12:61369167:T:C	rs75840305	T	C	T	SOX2_HMG_3	10	1	-	3.9863341326560513	-2.922420646659169	CATCATTTCAAGTGAAG
chr12	61487858	61487859	chr12:61487859:G:C	rs1377620	G	C	G	SOX2_HMG_3	36	0	+	0	0	.
chr12	61517234	61517235	chr12:61517235:T:C	rs17701938	T	C	T	SOX2_HMG_3	-1	0	+	0	0	.
chr12	61872405	61872406	chr12:61872406:T:A	rs10492352	T	A	T	SOX2_HMG_3	-13	0	-	0	0	.
chr12	62035691	62035692	chr12:62035692:C:T	rs348684	C	T	T	SOX2_HMG_3	20	0	-	0	0	.
chr12	62035701	62035702	chr12:62035702:T:C	rs76074364	T	C	T	SOX2_HMG_3	10	1	-	4.8899268178326665	-2.0188279614825535	CGTCAATAGCACTGAAG
chr12	62131388	62131389	chr12:62131389:A:G	rs1245436	A	G	G	SOX2_HMG_3	-17	0	+	0	0	.
chr12	62292642	62292643	chr12:62292643:C:T	rs561389242	C	T	C	SOX2_HMG_3	22	0	-	0	0	.
chr12	62372293	62372294	chr12:62372294:G:A	rs140607961	G	A	G	SOX2_HMG_3	23	0	-	0	0	.
chr12	62777185	62777186	chr12:62777186:T:A	rs17098303	T	A	T	SOX2_HMG_3	22	0	+	0	0	.
chr12	63076044	63076045	chr12:63076045:C:A	rs1495016	C	A	A	SOX2_HMG_3	3	1	+	6.765313070160788	-0.1434417091544331	CATCAAGGGAAGTGAAG
chr12	63107545	63107546	chr12:63107546:T:C	rs983452	T	C	C	SOX2_HMG_3	22	0	-	0	0	.
chr12	63349183	63349184	chr12:63349184:G:A	rs1251623	G	A	G	SOX2_HMG_3	-20	0	+	0	0	.
chr12	63389856	63389857	chr12:63389857:G:A	rs488736	G	A	G	SOX2_HMG_3	-11	0	+	0	0	.
chr12	63446195	63446196	chr12:63446196:G:T	rs693920	G	T	T	SOX2_HMG_3	7	1	+	4.97143224591226	2.9267217411787243	AATAAATGTTAATGATA
chr12	63499998	63499999	chr12:63499999:C:T	rs1879386	C	T	c	SOX2_HMG_3	27	0	-	0	0	.
chr12	63882888	63882889	chr12:63882889:C:T	rs80180884	C	T	C	SOX2_HMG_3	-2	0	+	0	0	.
chr12	63925063	63925064	chr12:63925064:A:G	rs73113995	A	G	A	SOX2_HMG_3	-8	0	-	0	0	.
chr12	64032336	64032337	chr12:64032337:C:T	rs74447608	C	T	C	SOX2_HMG_3	-15	0	+	0	0	.
chr12	64180492	64180493	chr12:64180493:G:A	rs789713	G	A	G	SOX2_HMG_3	-14	0	-	0	0	.
chr12	64404051	64404052	chr12:64404052:G:C	rs12306555	G	C	G	SOX2_HMG_3	-10	0	+	0	0	.
chr12	65394641	65394642	chr12:65394642:G:A	rs10784450	G	A	A	SOX2_HMG_3	-11	0	+	0	0	.
chr12	65642578	65642579	chr12:65642579:T:C	chr12:65642579:T:C	T	C	T	SOX2_HMG_3	36	0	-	0	0	.
chr12	65803546	65803547	chr12:65803547:G:T	rs2259604	G	T	G	SOX2_HMG_3	3	1	-	2.276537082082547	-4.632217697232672	AATCCATGGGAGTGAGG
chr12	65872786	65872787	chr12:65872787:A:G	rs7967707	A	G	A	SOX2_HMG_3	31	0	+	0	0	.
chr12	66108884	66108885	chr12:66108885:A:T	rs7302893	A	T	A	SOX2_HMG_3	30	0	-	0	0	.
chr12	66422358	66422359	chr12:66422359:A:G	rs10748045	A	G	A	SOX2_HMG_3	-17	0	-	0	0	.
chr12	66461919	66461920	chr12:66461920:A:G	rs10219665	A	G	A	SOX2_HMG_3	35	0	+	0	0	.
chr12	66644359	66644360	chr12:66644360:T:C	rs10878484	T	C	T	SOX2_HMG_3	-7	0	-	0	0	.
chr12	66901875	66901876	chr12:66901876:A:C	rs1504315	A	C	A	SOX2_HMG_3	15	1	+	5.044892507503228	3.437085788043092	CCACAATTGTATTGTAA
chr12	66901891	66901892	chr12:66901892:C:T	rs1504314	C	T	C	SOX2_HMG_3	31	0	+	0	0	.
chr12	66935541	66935542	chr12:66935542:G:A	rs12818966	G	A	G	SOX2_HMG_3	-20	0	+	0	0	.
chr12	67303536	67303537	chr12:67303537:C:T	rs710630	C	T	T	SOX2_HMG_3	19	0	+	0	0	.
chr12	67327830	67327831	chr12:67327831:A:G	rs1082702	A	G	G	SOX2_HMG_3	8	1	-	7.407658916312967	6.5359225636771034	GATAAATGTTATTGTAT
chr12	67388078	67388079	chr12:67388079:T:C	rs7955266	T	C	C	SOX2_HMG_3	19	0	+	0	0	.
chr12	67446805	67446806	chr12:67446806:G:A	rs10878619	G	A	A	SOX2_HMG_3	-10	0	+	0	0	.
chr12	67446837	67446838	chr12:67446838:C:A	rs10878620	C	A	A	SOX2_HMG_3	22	0	+	0	0	.
chr12	67515889	67515890	chr12:67515890:T:C	rs17103930	T	C	T	SOX2_HMG_3	8	1	+	3.813383746966821	2.941647394330958	CAACACTGTCAGTGAAA
chr12	67590358	67590359	chr12:67590359:A:G	rs533601052	A	G	A	SOX2_HMG_3	-3	0	-	0	0	.
chr12	67780833	67780834	chr12:67780834:A:G	rs142037021	A	G	A	SOX2_HMG_3	-7	0	+	0	0	.
chr12	67854651	67854652	chr12:67854652:G:A	rs7295446	G	A	G	SOX2_HMG_3	26	0	+	0	0	.
chr12	67911948	67911949	chr12:67911949:A:C	rs11176942	A	C	A	SOX2_HMG_3	-6	0	+	0	0	.
chr12	68351670	68351671	chr12:68351671:T:C	rs12828683	T	C	T	SOX2_HMG_3	-18	0	+	0	0	.
chr12	68582146	68582147	chr12:68582147:T:C	rs146013034	T	C	T	SOX2_HMG_3	17	0	+	0	0	.
chr12	68613797	68613798	chr12:68613798:T:C	rs12304345	T	C	C	SOX2_HMG_3	33	0	+	0	0	.
chr12	68638917	68638918	chr12:68638918:C:G	rs558786800	C	G	N	SOX2_HMG_3	-16	0	-	0	0	.
chr12	68809743	68809744	chr12:68809744:T:A	rs1196335	T	A	T	SOX2_HMG_3	-16	0	+	0	0	.
chr12	68809773	68809774	chr12:68809774:T:G	rs3730498	T	G	T	SOX2_HMG_3	14	1	+	4.382485864627184	2.913382092140359	AATCTATGTTATTGTCC
chr12	68899462	68899463	chr12:68899463:T:C	rs1380830638	T	C	T	SOX2_HMG_3	8	1	+	3.873802768507913	3.00206641587205	TCTCAAAATTATTGAGG
chr12	68915162	68915163	chr12:68915163:C:T	rs568522042	C	T	C	SOX2_HMG_3	22	0	+	0	0	.
chr12	68953572	68953573	chr12:68953573:A:G	rs7969929	A	G	A	SOX2_HMG_3	9	1	-	3.004090367149981	2.197420233212935	GGGCAATGTTTGTGAAT
chr12	68982155	68982156	chr12:68982156:G:A	rs4913480	G	A	G	SOX2_HMG_3	34	0	+	0	0	.
chr12	69026307	69026308	chr12:69026308:A:C	rs35348006	A	C	A	SOX2_HMG_3	11	1	-	2.450537156717371	1.0334571874974223	GATCAAGGGATTTGATT
chr12	69068687	69068688	chr12:69068688:T:G	chr12:69068688:T:G	T	G	t	SOX2_HMG_3	28	0	-	0	0	.
chr12	69091671	69091672	chr12:69091672:A:G	rs12322915	A	G	A	SOX2_HMG_3	11	1	-	6.982084049983508	0.28939255175116113	TTGCAATGTAATTGAGT
chr12	69103039	69103040	chr12:69103040:G:C	rs10878911	G	C	G	SOX2_HMG_3	31	0	+	0	0	.
chr12	69103040	69103041	chr12:69103041:A:T	rs10878912	A	T	A	SOX2_HMG_3	32	0	+	0	0	.
chr12	69130244	69130245	chr12:69130245:C:G	rs10784763	C	G	C	SOX2_HMG_3	34	0	+	0	0	.
chr12	69323385	69323386	chr12:69323386:T:G	rs10878963	T	G	T	SOX2_HMG_3	-1	0	-	0	0	.
chr12	69350323	69350324	chr12:69350324:C:T	rs686407	C	T	T	SOX2_HMG_3	15	1	-	3.617341022694859	4.04981460424576	TTTCATTTGTATTGAGT
chr12	69434900	69434901	chr12:69434901:G:A	rs11177669	G	A	A	SOX2_HMG_3	-7	0	+	0	0	.
chr12	69535213	69535214	chr12:69535214:G:A	rs3910823	G	A	G	SOX2_HMG_3	19	0	+	0	0	.
chr12	69948399	69948400	chr12:69948400:G:C	rs11177989	G	C	G	SOX2_HMG_3	34	0	+	0	0	.
chr12	70005692	70005693	chr12:70005693:C:T	rs1239933	C	T	c	SOX2_HMG_3	23	0	+	0	0	.
chr12	70069418	70069419	chr12:70069419:G:C	rs2164820	G	C	G	SOX2_HMG_3	36	0	+	0	0	.
chr12	70181000	70181001	chr12:70181001:T:C	rs1406013	T	C	T	SOX2_HMG_3	5	1	-	10.64981558651318	3.741060807197959	GATCAATGTTATGGAAA
chr12	70240891	70240892	chr12:70240892:G:C	rs11610894	G	C	G	SOX2_HMG_3	-6	0	+	0	0	.
chr12	70557831	70557832	chr12:70557832:T:C	rs73140118	T	C	T	SOX2_HMG_3	-7	0	+	0	0	.
chr12	70815760	70815761	chr12:70815761:T:C	rs2458438	T	C	C	SOX2_HMG_3	14	1	-	8.050284931271118	3.8684073139699984	AATGAATGTTAGTGAGT
chr12	70815770	70815771	chr12:70815771:T:G	rs2470375	T	G	T	SOX2_HMG_3	4	1	-	8.050284931271118	1.1415301519558971	AATGAATGTTAGTGAGT
chr12	70849627	70849628	chr12:70849628:T:A	rs150770764	T	A	T	SOX2_HMG_3	9	1	-	4.3286607624249385	6.187236104371667	AATCAATGGAAATGTCA
chr12	70948489	70948490	chr12:70948490:G:A	rs11178499	G	A	A	SOX2_HMG_3	26	0	-	0	0	.
chr12	70948515	70948516	chr12:70948516:G:A	rs34475547	G	A	A	SOX2_HMG_3	0	1	-	3.5918007090344055	3.454471730985743	CGTTAATGTCATTGTGT
chr12	71282489	71282490	chr12:71282490:A:T	rs76543553	A	T	A	SOX2_HMG_3	28	0	+	0	0	.
chr12	71355056	71355057	chr12:71355057:G:A	rs5006248	G	A	A	SOX2_HMG_3	30	0	+	0	0	.
chr12	71476482	71476483	chr12:71476483:G:A	rs10784919	G	A	G	SOX2_HMG_3	8	1	+	1.8425987745602115	0.9935548271965832	GGTCAAGGGCAGTGGGA
chr12	71525084	71525085	chr12:71525085:C:A	rs118086634	C	A	C	SOX2_HMG_3	35	0	+	0	0	.
chr12	71558834	71558835	chr12:71558835:C:T	rs1032611284	C	T	C	SOX2_HMG_3	-7	0	+	0	0	.
chr12	71754567	71754568	chr12:71754568:C:G	rs10879331	C	G	G	SOX2_HMG_3	-2	0	+	0	0	.
chr12	71754570	71754571	chr12:71754571:A:G	rs147965811	A	G	A	SOX2_HMG_3	1	1	+	3.8316429857849412	1.99999539570565	GATCATTAGCATTGTGA
chr12	72901833	72901834	chr12:72901834:C:T	rs17799817	C	T	C	SOX2_HMG_3	-8	0	-	0	0	.
chr12	72938017	72938018	chr12:72938018:C:G	rs4505127	C	G	C	SOX2_HMG_3	-11	0	-	0	0	.
chr12	73025331	73025332	chr12:73025332:G:A	rs995163	G	A	A	SOX2_HMG_3	-9	0	+	0	0	.
chr12	73160217	73160218	chr12:73160218:T:A	rs12813018	T	A	A	SOX2_HMG_3	-12	0	+	0	0	.
chr12	73414891	73414892	chr12:73414892:C:A	rs1851042	C	A	C	SOX2_HMG_3	28	0	-	0	0	.
chr12	73815305	73815306	chr12:73815306:C:T	rs76443784	C	T	C	SOX2_HMG_3	28	0	+	0	0	.
chr12	74424870	74424871	chr12:74424871:T:A	rs75881685	T	A	T	SOX2_HMG_3	25	0	-	0	0	.
chr12	75457997	75457998	chr12:75457998:T:A	rs7307352	T	A	T	SOX2_HMG_3	27	0	-	0	0	.
chr12	75571290	75571291	chr12:75571291:T:C	rs58248634	T	C	T	SOX2_HMG_3	-9	0	-	0	0	.
chr12	76190407	76190408	chr12:76190408:G:A	rs142746076	G	A	G	SOX2_HMG_3	-15	0	-	0	0	.
chr12	76268391	76268392	chr12:76268392:A:G	rs7311600	A	G	g	SOX2_HMG_3	16	1	-	3.7516273615370825	2.5548553083967285	CATCAATATTGGTGTTT
chr12	76302458	76302459	chr12:76302459:A:G	rs1473619	A	G	G	SOX2_HMG_3	5	1	-	3.949742385308428	3.949742385308428	TAGCATTGTCAGTGAAG
chr12	76445362	76445363	chr12:76445363:G:A	rs11835472	G	A	a	SOX2_HMG_3	-19	0	+	0	0	.
chr12	76589044	76589045	chr12:76589045:A:C	rs4432068	A	C	C	SOX2_HMG_3	-18	0	+	0	0	.
chr12	76719327	76719328	chr12:76719328:A:G	rs759171246	A	G	A	SOX2_HMG_3	18	0	-	0	0	.
chr12	76942645	76942646	chr12:76942646:C:T	rs58830541	C	T	C	SOX2_HMG_3	34	0	+	0	0	.
chr12	77171903	77171904	chr12:77171904:T:A	rs7955423	T	A	T	SOX2_HMG_3	12	1	+	3.647132337479029	-3.2616224418361908	TGTCACTGTTAGTGTGG
chr12	77171919	77171920	chr12:77171920:A:G	rs771621	A	G	G	SOX2_HMG_3	28	0	+	0	0	.
chr12	77377714	77377715	chr12:77377715:G:A	rs4017759	G	A	A	SOX2_HMG_3	-1	0	+	0	0	.
chr12	77377727	77377728	chr12:77377728:T:C	rs79841552	T	C	T	SOX2_HMG_3	12	1	+	5.637833475554007	-1.2709213037612128	TAACAATTGCATTGGAA
chr12	77421889	77421890	chr12:77421890:T:C	rs7296457	T	C	C	SOX2_HMG_3	1	1	-	11.502461305186488	9.670813715107197	GATCAATTATAGTGACA
chr12	77585069	77585070	chr12:77585070:A:G	rs696447	A	G	A	SOX2_HMG_3	10	1	+	4.250111396617502	-2.658643382697718	TGTCTATGCCATTGTTT
chr12	77675930	77675931	chr12:77675931:G:A	rs711137	G	A	G	SOX2_HMG_3	-2	0	+	0	0	.
chr12	77735030	77735031	chr12:77735031:G:A	rs711152	G	A	A	SOX2_HMG_3	-9	0	+	0	0	.
chr12	77745674	77745675	chr12:77745675:G:T	rs10859303	G	T	G	SOX2_HMG_3	1	1	+	5.492597219006013	4.318200956561988	GGTCAATTGTGGTGAAG
chr12	77814958	77814959	chr12:77814959:C:A	rs7302948	C	A	C	SOX2_HMG_3	11	1	-	8.07408956761385	9.4911695368338	TGCCAATGTAAGTGATG
chr12	77946837	77946838	chr12:77946838:T:A	rs2619072	T	A	A	SOX2_HMG_3	10	1	-	5.954705720292831	-0.9540490590223891	TTTAAATGTCATTGAAA
chr12	77962613	77962614	chr12:77962614:G:C	rs2464130	G	C	c	SOX2_HMG_3	-20	0	-	0	0	.
chr12	78003118	78003119	chr12:78003119:T:G	rs1731716	T	G	G	SOX2_HMG_3	22	0	-	0	0	.
chr12	78148813	78148814	chr12:78148814:T:G	rs444864	T	G	T	SOX2_HMG_3	10	1	-	2.6434937088552406	-4.265261070459982	AATCAATGGAATAGGCA
chr12	78186138	78186139	chr12:78186139:G:A	rs77053059	G	A	g	SOX2_HMG_3	-1	0	+	0	0	.
chr12	78292901	78292902	chr12:78292902:T:C	rs79811037	T	C	C	SOX2_HMG_3	-15	0	-	0	0	.
chr12	78292905	78292906	chr12:78292906:C:T	rs77103040	C	T	T	SOX2_HMG_3	-19	0	-	0	0	.
chr12	78387556	78387557	chr12:78387557:T:C	rs11109589	T	C	T	SOX2_HMG_3	-18	0	+	0	0	.
chr12	78458227	78458228	chr12:78458228:C:T	rs9308307	C	T	C	SOX2_HMG_3	27	0	-	0	0	.
chr12	79250406	79250407	chr12:79250407:C:T	rs752439610	C	T	C	SOX2_HMG_3	-20	0	+	0	0	.
chr12	79252524	79252525	chr12:79252525:A:G	rs1245825	A	G	G	SOX2_HMG_3	5	1	+	5.757551322359284	-1.151203456955936	TGTGAATGGAAGTGATA
chr12	79323187	79323188	chr12:79323188:C:T	rs116692510	C	T	C	SOX2_HMG_3	16	1	-	3.63811054630315	3.3644229299128785	TGTCAAAGTAATTGTAG
chr12	79369613	79369614	chr12:79369614:G:A	rs6539445	G	A	G	SOX2_HMG_3	-1	0	-	0	0	.
chr12	79409888	79409889	chr12:79409889:G:T	rs1526961	G	T	T	SOX2_HMG_3	-12	0	-	0	0	.
chr12	79738929	79738930	chr12:79738930:C:T	rs2808355	C	T	T	SOX2_HMG_3	1	1	-	3.2497003772423025	5.081347967321594	AGACAATTGCTTTGATG
chr12	79886133	79886134	chr12:79886134:T:C	rs182441395	T	C	T	SOX2_HMG_3	-13	0	+	0	0	.
chr12	79977982	79977983	chr12:79977983:T:C	rs112442181	T	C	T	SOX2_HMG_3	15	1	+	5.3998091701308155	2.5571000139539573	TGTTAATTTTATTGATC
chr12	79977987	79977988	chr12:79977988:C:T	rs78626556	C	T	C	SOX2_HMG_3	20	0	+	0	0	.
chr12	80236044	80236045	chr12:80236045:A:G	rs1451104	A	G	A	SOX2_HMG_3	5	1	+	3.7983081737257947	-3.110446605589425	ATTGAATGCCAGTGAAT
chr12	80654569	80654570	chr12:80654570:T:G	rs1163023	T	G	-	SOX2_HMG_3	25	0	+	0	0	.
chr12	80830393	80830394	chr12:80830394:A:G	rs12314666	A	G	G	SOX2_HMG_3	1	1	-	10.85197453608862	10.85197453608862	ATTCAATGTCATTGGTG
chr12	80913743	80913744	chr12:80913744:A:G	rs7957120	A	G	A	SOX2_HMG_3	-16	0	-	0	0	.
chr12	81224945	81224946	chr12:81224946:C:G	rs1921068	C	G	G	SOX2_HMG_3	11	1	+	2.6345551930756925	7.910166722088091	GCACAATAGTACTGATG
chr12	81510771	81510772	chr12:81510772:C:T	rs79017802	C	T	C	SOX2_HMG_3	32	0	-	0	0	.
chr12	81633428	81633429	chr12:81633429:C:A	rs17008848	C	A	C	SOX2_HMG_3	3	1	+	3.63568370044496	-3.2730710788702595	TGGCAATGTTCTTGAGA
chr12	81702167	81702168	chr12:81702168:T:A	rs141137649	T	A	T	SOX2_HMG_3	2	1	+	5.456070154744472	1.5884553200664282	CATCAATGACACTGTGG
chr12	81731100	81731101	chr12:81731101:C:T	rs1922549	C	T	C	SOX2_HMG_3	-10	0	-	0	0	.
chr12	81910632	81910633	chr12:81910633:C:T	rs3943787	C	T	C	SOX2_HMG_3	30	0	+	0	0	.
chr12	83004013	83004014	chr12:83004014:C:T	rs1796205	C	T	T	SOX2_HMG_3	19	0	+	0	0	.
chr12	84224303	84224304	chr12:84224304:C:T	rs141249496	C	T	C	SOX2_HMG_3	36	0	-	0	0	.
chr12	84357899	84357900	chr12:84357900:T:G	rs9669258	T	G	G	SOX2_HMG_3	28	0	-	0	0	.
chr12	84358393	84358394	chr12:84358394:T:G	rs7301380	T	G	T	SOX2_HMG_3	34	0	+	0	0	.
chr12	84502997	84502998	chr12:84502998:C:T	rs12812617	C	T	C	SOX2_HMG_3	13	1	-	5.477990817648376	-1.4307639616668448	GAACAAGGCTATTGAGA
chr12	84642398	84642399	chr12:84642399:C:T	rs1459618	C	T	T	SOX2_HMG_3	-1	0	+	0	0	.
chr12	85429820	85429821	chr12:85429821:T:G	rs7135361	T	G	G	SOX2_HMG_3	-15	0	-	0	0	.
chr12	85748024	85748025	chr12:85748025:T:C	rs4897829	T	C	T	SOX2_HMG_3	-5	0	-	0	0	.
chr12	86081142	86081143	chr12:86081143:T:C	rs1502799	T	C	T	SOX2_HMG_3	-15	0	+	0	0	.
chr12	86097362	86097363	chr12:86097363:A:C	rs75526457	A	C	A	SOX2_HMG_3	31	0	-	0	0	.
chr12	86230377	86230378	chr12:86230378:C:G	rs12305255	C	G	C	SOX2_HMG_3	-7	0	+	0	0	.
chr12	86230388	86230389	chr12:86230389:A:G	rs61949039	A	G	A	SOX2_HMG_3	4	1	+	9.08290615386279	2.174151374547571	CATCAATATAAGTGAAC
chr12	86945963	86945964	chr12:86945964:G:A	rs73192720	G	A	G	SOX2_HMG_3	13	1	+	3.7602372742309353	-3.148517505084285	TAGCATTGAAATTGATT
chr12	87085097	87085098	chr12:87085098:G:A	rs77186575	G	A	G	SOX2_HMG_3	-13	0	-	0	0	.
chr12	87124465	87124466	chr12:87124466:C:A	rs7964342	C	A	A	SOX2_HMG_3	25	0	+	0	0	.
chr12	87266483	87266484	chr12:87266484:C:T	chr12:87266484:C:T	C	T	C	SOX2_HMG_3	29	0	+	0	0	.
chr12	88392036	88392037	chr12:88392037:A:G	rs529091080	A	G	A	SOX2_HMG_3	29	0	-	0	0	.
chr12	88625105	88625106	chr12:88625106:C:G	rs1703078	C	G	G	SOX2_HMG_3	-15	0	+	0	0	.
chr12	88625153	88625154	chr12:88625154:A:G	rs147838291	A	G	A	SOX2_HMG_3	33	0	+	0	0	.
chr12	88947585	88947586	chr12:88947586:G:T	rs996286	G	T	G	SOX2_HMG_3	7	1	+	5.815370735444435	3.7706602307108987	ATTCAAGGTTATTGACA
chr12	89134167	89134168	chr12:89134168:C:T	rs71454146	C	T	C	SOX2_HMG_3	-4	0	-	0	0	.
chr12	89227051	89227052	chr12:89227052:G:C	rs2407886	G	C	G	SOX2_HMG_3	20	0	-	0	0	.
chr12	89234531	89234532	chr12:89234532:C:T	rs11105214	C	T	C	SOX2_HMG_3	-16	0	-	0	0	.
chr12	89281598	89281599	chr12:89281599:G:A	rs2638470	G	A	G	SOX2_HMG_3	36	0	-	0	0	.
chr12	89751173	89751174	chr12:89751174:A:G	rs11105400	A	G	A	SOX2_HMG_3	6	1	-	12.40634043357198	5.49758565425676	CTTCAATGCTATTGAAT
chr12	89762796	89762797	chr12:89762797:A:T	rs7961386	A	T	A	SOX2_HMG_3	-4	0	-	0	0	.
chr12	89775630	89775631	chr12:89775631:T:C	rs10858928	T	C	T	SOX2_HMG_3	-4	0	+	0	0	.
chr12	89775647	89775648	chr12:89775648:G:T	rs142416476	G	T	G	SOX2_HMG_3	13	1	+	7.958295236253376	1.0495404569381543	GAGCAATAAAATTGAGG
chr12	89794078	89794079	chr12:89794079:G:A	rs4842502	G	A	G	SOX2_HMG_3	25	0	+	0	0	.
chr12	89796626	89796627	chr12:89796627:G:A	rs11105411	G	A	G	SOX2_HMG_3	8	1	-	4.974710070063981	5.846446422699845	AAGCTATGCCAGTGATG
chr12	89950917	89950918	chr12:89950918:A:G	rs7294671	A	G	A	SOX2_HMG_3	5	1	+	3.841210688447308	-3.0675440908679126	TAACAATGGTAATGACT
chr12	91039950	91039951	chr12:91039951:A:T	rs12829632	A	T	A	SOX2_HMG_3	33	0	+	0	0	.
chr12	91142636	91142637	chr12:91142637:A:T	rs12313057	A	T	A	SOX2_HMG_3	33	0	+	0	0	.
chr12	91172222	91172223	chr12:91172223:T:C	chr12:91172223:T:C	T	C	T	SOX2_HMG_3	36	0	+	0	0	.
chr12	91180112	91180113	chr12:91180113:A:G	rs12317815	A	G	A	SOX2_HMG_3	0	1	-	4.0310641596472845	4.168393137695949	TTTCAATGCAATTTAAA
chr12	91524008	91524009	chr12:91524009:T:C	rs769869753	T	C	T	SOX2_HMG_3	-15	0	+	0	0	.
chr12	91561572	91561573	chr12:91561573:T:G	chr12:91561573:T:G	T	G	t	SOX2_HMG_3	-13	0	+	0	0	.
chr12	91759931	91759932	chr12:91759932:A:G	rs118084507	A	G	A	SOX2_HMG_3	35	0	+	0	0	.
chr12	91786491	91786492	chr12:91786492:A:G	rs117187935	A	G	A	SOX2_HMG_3	5	1	+	5.024552514613067	-1.8842022647021535	GATCCATGCAAGTGTTA
chr12	91980120	91980121	chr12:91980121:G:A	rs73218562	G	A	G	SOX2_HMG_3	29	0	+	0	0	.
chr12	92001084	92001085	chr12:92001085:C:G	rs12231344	C	G	c	SOX2_HMG_3	30	0	+	0	0	.
chr12	92064626	92064627	chr12:92064627:C:T	rs67251416	C	T	C	SOX2_HMG_3	-10	0	+	0	0	.
chr12	92064634	92064635	chr12:92064635:T:A	rs995163186	T	A	T	SOX2_HMG_3	-2	0	+	0	0	.
chr12	92301622	92301623	chr12:92301623:T:C	rs2647901	T	C	C	SOX2_HMG_3	6	1	+	3.337427070466281	-3.5713277088489392	TAAAAATGATAGTGAGG
chr12	92404162	92404163	chr12:92404163:T:C	rs972255866	T	C	T	SOX2_HMG_3	26	0	+	0	0	.
chr12	92562265	92562266	chr12:92562266:A:G	rs11833273	A	G	A	SOX2_HMG_3	-6	0	-	0	0	.
chr12	92562267	92562268	chr12:92562268:G:A	rs11838034	G	A	G	SOX2_HMG_3	-8	0	-	0	0	.
chr12	92592759	92592760	chr12:92592760:A:G	rs55654693	A	G	A	SOX2_HMG_3	11	1	-	5.0980888807476745	-1.594602617484672	TATGAATGGAATTGGTG
chr12	92655912	92655913	chr12:92655913:T:C	rs10859354	T	C	C	SOX2_HMG_3	30	0	+	0	0	.
chr12	92820960	92820961	chr12:92820961:T:C	rs11106710	T	C	C	SOX2_HMG_3	-5	0	-	0	0	.
chr12	93016066	93016067	chr12:93016067:G:A	rs10859402	G	A	G	SOX2_HMG_3	3	1	+	4.048748644571605	4.048748644571605	CACGAATGGCAGTGATG
chr12	93023897	93023898	chr12:93023898:T:C	rs141969981	T	C	T	SOX2_HMG_3	16	1	+	4.888733325887708	3.6919612727473545	GTTCAATGACATTAAGT
chr12	93089797	93089798	chr12:93089798:C:T	rs56067629	C	T	C	SOX2_HMG_3	-17	0	-	0	0	.
chr12	93229513	93229514	chr12:93229514:G:A	rs10735313	G	A	G	SOX2_HMG_3	-4	0	-	0	0	.
chr12	93244038	93244039	chr12:93244039:T:C	rs143448081	T	C	T	SOX2_HMG_3	-2	0	-	0	0	.
chr12	93279759	93279760	chr12:93279760:G:C	rs6538404	G	C	G	SOX2_HMG_3	3	1	-	3.6977576513860786	-3.210997127929139	GAACAATGGTATTAGTA
chr12	93525505	93525506	chr12:93525506:G:A	rs10859504	G	A	G	SOX2_HMG_3	-7	0	-	0	0	.
chr12	93578493	93578494	chr12:93578494:T:G	chr12:93578494:T:G	T	G	T	SOX2_HMG_3	-18	0	+	0	0	.
chr12	93593129	93593130	chr12:93593130:G:A	rs3887022	G	A	G	SOX2_HMG_3	-14	0	+	0	0	.
chr12	93700204	93700205	chr12:93700205:C:T	rs1003537579	C	T	C	SOX2_HMG_3	0	1	+	5.25917672730203	5.121847749253366	CGTCAATGTCATGGTTT
chr12	93861674	93861675	chr12:93861675:G:A	rs7957946	G	A	A	SOX2_HMG_3	26	0	-	0	0	.
chr12	93946956	93946957	chr12:93946957:G:A	rs11107292	G	A	G	SOX2_HMG_3	24	0	-	0	0	.
chr12	94142170	94142171	chr12:94142171:A:G	rs10859677	A	G	A	SOX2_HMG_3	11	1	-	4.293986197245416	-2.39870530098693	GAGAAATTCCATTGATA
chr12	94217307	94217308	chr12:94217308:C:T	rs4761593	C	T	T	SOX2_HMG_3	-19	0	-	0	0	.
chr12	94291261	94291262	chr12:94291262:G:A	rs4761602	G	A	G	SOX2_HMG_3	35	0	+	0	0	.
chr12	94504724	94504725	chr12:94504725:T:C	rs74623801	T	C	T	SOX2_HMG_3	10	1	-	3.710800821721229	-3.1979539575939904	GCTCAATATTATGGTTG
chr12	94576970	94576971	chr12:94576971:A:G	rs1296522	A	G	g	SOX2_HMG_3	-8	0	-	0	0	.
chr12	94685339	94685340	chr12:94685340:G:A	rs1211199739	G	A	G	SOX2_HMG_3	21	0	-	0	0	.
chr12	94685340	94685341	chr12:94685341:C:A	rs1287489106	C	A	C	SOX2_HMG_3	20	0	-	0	0	.
chr12	94685356	94685357	chr12:94685357:T:A	rs73377770	T	A	T	SOX2_HMG_3	4	1	-	3.9464655094126617	-2.9622892699025596	CAACAATTGTGGTGATG
chr12	95197809	95197810	chr12:95197810:T:C	rs7956997	T	C	t	SOX2_HMG_3	1	1	-	2.0518558516849277	0.220208261605636	CATTAATGGCATGGAAA
chr12	95442969	95442970	chr12:95442970:G:T	rs2596752	G	T	G	SOX2_HMG_3	22	0	-	0	0	.
chr12	95545714	95545715	chr12:95545715:T:A	rs6538642	T	A	T	SOX2_HMG_3	10	1	+	4.385601788042611	11.29435656735783	GTTCAATATTTTTGAAT
chr12	95724020	95724021	chr12:95724021:G:A	rs11614560	G	A	A	SOX2_HMG_3	-20	0	-	0	0	.
chr12	95785637	95785638	chr12:95785638:C:T	rs10859950	C	T	C	SOX2_HMG_3	33	0	+	0	0	.
chr12	96046834	96046835	chr12:96046835:A:C	rs2660848	A	C	C	SOX2_HMG_3	20	0	+	0	0	.
chr12	96054321	96054322	chr12:96054322:A:G	rs2540473	A	G	A	SOX2_HMG_3	-3	0	-	0	0	.
chr12	96392663	96392664	chr12:96392664:T:C	rs151081345	T	C	T	SOX2_HMG_3	5	1	-	3.8689151299530606	-3.039839649362158	TCCCAATTTCAGTGAAT
chr12	96766431	96766432	chr12:96766432:G:C	rs187864968	G	C	G	SOX2_HMG_3	-17	0	-	0	0	.
chr12	96766432	96766433	chr12:96766433:G:T	rs34477	G	T	G	SOX2_HMG_3	-18	0	-	0	0	.
chr12	96932165	96932166	chr12:96932166:G:A	rs11836610	G	A	G	SOX2_HMG_3	8	1	-	3.158143264004463	4.029879616640325	CAGCAATGCTATTTTTT
chr12	97063759	97063760	chr12:97063760:A:T	rs57280713	A	T	A	SOX2_HMG_3	30	0	-	0	0	.
chr12	97168825	97168826	chr12:97168826:G:C	rs76699399	G	C	G	SOX2_HMG_3	11	1	+	5.505252528358223	0.22964099934582527	TATCAAGGAAAGTGAAA
chr12	97168840	97168841	chr12:97168841:A:G	rs1019313	A	G	G	SOX2_HMG_3	26	0	+	0	0	.
chr12	97173736	97173737	chr12:97173737:A:G	rs12367258	A	G	A	SOX2_HMG_3	10	1	+	5.073688221634464	-1.8350665576807565	AATTAATTCTATTGTAG
chr12	97182737	97182738	chr12:97182738:A:G	rs759476	A	G	A	SOX2_HMG_3	25	0	-	0	0	.
chr12	97474464	97474465	chr12:97474465:G:C	rs11109050	G	C	G	SOX2_HMG_3	28	0	-	0	0	.
chr12	97572502	97572503	chr12:97572503:T:C	rs1376346	T	C	C	SOX2_HMG_3	-12	0	+	0	0	.
chr12	97942207	97942208	chr12:97942208:G:A	rs11109282	G	A	G	SOX2_HMG_3	18	0	+	0	0	.
chr12	98110060	98110061	chr12:98110061:T:C	rs74487163	T	C	T	SOX2_HMG_3	-16	0	+	0	0	.
chr12	98194786	98194787	chr12:98194787:A:G	rs17456212	A	G	A	SOX2_HMG_3	32	0	-	0	0	.
chr12	98406278	98406279	chr12:98406279:G:A	rs11835579	G	A	G	SOX2_HMG_3	-7	0	-	0	0	.
chr12	99522310	99522311	chr12:99522311:A:T	rs10860455	A	T	t	SOX2_HMG_3	22	0	-	0	0	.
chr12	99532232	99532233	chr12:99532233:T:G	rs12321286	T	G	T	SOX2_HMG_3	-17	0	-	0	0	.
chr12	99752978	99752979	chr12:99752979:T:C	rs10860508	T	C	T	SOX2_HMG_3	26	0	+	0	0	.
chr12	99960788	99960789	chr12:99960789:C:T	rs10507114	C	T	C	SOX2_HMG_3	-2	0	-	0	0	.
chr12	100995403	100995404	chr12:100995404:C:T	rs61944890	C	T	c	SOX2_HMG_3	26	0	+	0	0	.
chr12	101041266	101041267	chr12:101041267:C:T	rs10507128	C	T	C	SOX2_HMG_3	14	1	-	4.04446458092783	8.22634219822895	CATCAATGCCCTTGGAA
chr12	101044558	101044559	chr12:101044559:C:T	rs75576383	C	T	C	SOX2_HMG_3	26	0	+	0	0	.
chr12	101116592	101116593	chr12:101116593:T:G	rs349661	T	G	G	SOX2_HMG_3	12	1	+	4.062468168041999	-2.846286611273222	TTACAATTGCAGTGACG
chr12	101299187	101299188	chr12:101299188:A:G	rs6538980	A	G	G	SOX2_HMG_3	1	1	+	3.8169021578209206	1.985254567741629	GAAAAATGTCATTGAGC
chr12	101502083	101502084	chr12:101502084:C:T	rs181054792	C	T	C	SOX2_HMG_3	32	0	-	0	0	.
chr12	101653813	101653814	chr12:101653814:G:A	rs11110926	G	A	A	SOX2_HMG_3	7	1	+	2.476023122871969	-0.25276399768936575	GAGAAATGCAAGTGAGG
chr12	101670739	101670740	chr12:101670740:G:A	rs7973756	G	A	A	SOX2_HMG_3	-12	0	+	0	0	.
chr12	101744184	101744185	chr12:101744185:G:A	rs112979792	G	A	G	SOX2_HMG_3	9	1	-	2.746734066638744	3.5534042005757898	GCTAAATGTCAGTGGTG
chr12	102949240	102949241	chr12:102949241:C:A	rs568205125	C	A	C	SOX2_HMG_3	14	1	-	5.688309503810791	7.157413276297616	AGGCAATGTCATTGGGT
chr12	103667093	103667094	chr12:103667094:C:T	rs3752879	C	T	c	SOX2_HMG_3	33	0	-	0	0	.
chr12	103809376	103809377	chr12:103809377:T:C	rs141300575	T	C	T	SOX2_HMG_3	0	1	+	5.55719206252258	5.694521040571244	TCTCAATGTTATTCTTG
chr12	104137027	104137028	chr12:104137028:C:A	rs7979713	C	A	A	SOX2_HMG_3	31	0	-	0	0	.
chr12	104137027	104137028	chr12:104137028:C:T	chr12:104137028:C:T	C	T	A	SOX2_HMG_3	31	0	-	0	0	.
chr12	104315780	104315781	chr12:104315781:C:T	rs4964287	C	T	C	SOX2_HMG_3	21	0	+	0	0	.
chr12	104339747	104339748	chr12:104339748:C:G	rs183087515	C	G	C	SOX2_HMG_3	7	1	-	2.4602005345036186	-4.272641676932356	GATCACTGGTAGCGAAG
chr12	104402711	104402712	chr12:104402712:G:T	rs59455817	G	T	G	SOX2_HMG_3	-18	0	+	0	0	.
chr12	104682778	104682779	chr12:104682779:C:T	rs75889538	C	T	C	SOX2_HMG_3	-4	0	+	0	0	.
chr12	104751393	104751394	chr12:104751394:G:T	rs2468109	G	T	g	SOX2_HMG_3	-6	0	+	0	0	.
chr12	104759791	104759792	chr12:104759792:C:T	rs903247	C	T	T	SOX2_HMG_3	-13	0	-	0	0	.
chr12	104889114	104889115	chr12:104889115:T:C	rs17036463	T	C	T	SOX2_HMG_3	25	0	-	0	0	.
chr12	105032969	105032970	chr12:105032970:A:C	rs7308574	A	C	C	SOX2_HMG_3	2	1	-	2.8053064780626635	-1.062308356615376	AATACATGTCAGTGATG
chr12	105330372	105330373	chr12:105330373:C:G	chr12:105330373:C:G	C	G	C	SOX2_HMG_3	-15	0	-	0	0	.
chr12	105918954	105918955	chr12:105918955:T:C	rs7960880	T	C	C	SOX2_HMG_3	8	1	+	2.360889621346019	1.4891532687101556	CATCCATGTTAGTGCTT
chr12	106022504	106022505	chr12:106022505:G:A	rs17038009	G	A	G	SOX2_HMG_3	17	0	-	0	0	.
chr12	106246064	106246065	chr12:106246065:T:G	chr12:106246065:T:G	T	G	T	SOX2_HMG_3	11	1	+	2.117458940694878	0.7003789714749292	GAGCAATGACATAGTGG
chr12	106268767	106268768	chr12:106268768:T:C	rs1148412	T	C	T	SOX2_HMG_3	-11	0	+	0	0	.
chr12	106405351	106405352	chr12:106405352:A:C	rs2250262	A	C	A	SOX2_HMG_3	2	1	-	7.28570953503991	3.418094700361867	ATTCAATGGTATTAAAA
chr12	106896214	106896215	chr12:106896215:G:A	chr12:106896215:G:A	G	A	G	SOX2_HMG_3	15	1	+	2.072020042881351	2.5044936244322518	GTTCAAAGGAAGTGAGC
chr12	107442066	107442067	chr12:107442067:A:G	rs76560464	A	G	A	SOX2_HMG_3	1	1	+	3.5204665281126646	1.688818938033374	AATCAATGTTTTTTAAA
chr12	107520801	107520802	chr12:107520802:G:A	rs11113367	G	A	G	SOX2_HMG_3	16	1	+	4.858878075901224	4.585190459510953	AAACAATGCCAGTGGCG
chr12	107520810	107520811	chr12:107520811:G:T	rs61938450	G	T	G	SOX2_HMG_3	25	0	+	0	0	.
chr12	107538261	107538262	chr12:107538262:A:C	rs12423245	A	C	C	SOX2_HMG_3	-5	0	+	0	0	.
chr12	107629808	107629809	chr12:107629809:A:G	rs7976658	A	G	G	SOX2_HMG_3	34	0	-	0	0	.
chr12	108201782	108201783	chr12:108201783:C:A	rs11113772	C	A	C	SOX2_HMG_3	11	1	-	3.3420572652143767	4.759137234434325	CTTCAATGAAGGTGATT
chr12	108304116	108304117	chr12:108304117:T:C	rs4964243	T	C	T	SOX2_HMG_3	25	0	+	0	0	.
chr12	108313869	108313870	chr12:108313870:G:A	rs2138271	G	A	A	SOX2_HMG_3	-15	0	-	0	0	.
chr12	108562918	108562919	chr12:108562919:C:T	rs186093048	C	T	C	SOX2_HMG_3	-20	0	-	0	0	.
chr12	108622632	108622633	chr12:108622633:G:A	rs1005333468	G	A	G	SOX2_HMG_3	-10	0	+	0	0	.
chr12	108629865	108629866	chr12:108629866:T:G	rs542107317	T	G	T	SOX2_HMG_3	25	0	-	0	0	.
chr12	109137150	109137151	chr12:109137151:C:T	rs1654884	C	T	C	SOX2_HMG_3	0	1	-	4.340391036321398	4.119796757236104	GCTCAATGTCAATGTAA
chr12	109291921	109291922	chr12:109291922:C:T	rs974325382	C	T	C	SOX2_HMG_3	-12	0	-	0	0	.
chr12	109306429	109306430	chr12:109306430:C:T	rs4766590	C	T	T	SOX2_HMG_3	36	0	-	0	0	.
chr12	109702583	109702584	chr12:109702584:T:C	rs1420746	T	C	T	SOX2_HMG_3	0	1	-	6.395389731444786	6.61598401053008	AAGCCATGCTATTGATT
chr12	109711904	109711905	chr12:109711905:C:A	rs4766483	C	A	C	SOX2_HMG_3	27	0	+	0	0	.
chr12	109951659	109951660	chr12:109951660:T:C	rs111835427	T	C	T	SOX2_HMG_3	8	1	-	3.8105640141904176	4.659607961554046	GTTCAATGAAAATGTTG
chr12	110135107	110135108	chr12:110135108:G:A	rs56076213	G	A	G	SOX2_HMG_3	33	0	-	0	0	.
chr12	110782003	110782004	chr12:110782004:C:A	rs11834902	C	A	C	SOX2_HMG_3	-14	0	+	0	0	.
chr12	110852916	110852917	chr12:110852917:A:G	rs78915675	A	G	A	SOX2_HMG_3	-10	0	-	0	0	.
chr12	110893332	110893333	chr12:110893333:C:T	rs74897448	C	T	C	SOX2_HMG_3	-13	0	+	0	0	.
chr12	110893351	110893352	chr12:110893352:T:A	rs11065751	T	A	T	SOX2_HMG_3	6	1	+	6.261614833003753	-0.6471399463114689	CTACAATGTCATTGTGG
chr12	110893360	110893361	chr12:110893361:G:A	rs11065752	G	A	A	SOX2_HMG_3	15	1	+	6.261614833003753	6.694088414554653	CTACAATGTCATTGTGG
chr12	111413460	111413461	chr12:111413461:T:A	rs12297345	T	A	T	SOX2_HMG_3	-4	0	-	0	0	.
chr12	112025491	112025492	chr12:112025492:A:G	rs4767293	A	G	G	SOX2_HMG_3	-8	0	+	0	0	.
chr12	112825712	112825713	chr12:112825713:A:C	rs7139170	A	C	A	SOX2_HMG_3	27	0	+	0	0	.
chr12	112926698	112926699	chr12:112926699:A:G	rs10850099	A	G	G	SOX2_HMG_3	-7	0	+	0	0	.
chr12	112926706	112926707	chr12:112926707:T:C	rs10850100	T	C	C	SOX2_HMG_3	1	1	+	3.9837949230062053	3.9837949230062053	ATGCATTGTCATTGATA
chr12	113009766	113009767	chr12:113009767:C:T	rs1293743	C	T	T	SOX2_HMG_3	-16	0	-	0	0	.
chr12	113073424	113073425	chr12:113073425:A:G	rs1674123	A	G	A	SOX2_HMG_3	-14	0	-	0	0	.
chr12	113252590	113252591	chr12:113252591:T:C	rs73192824	T	C	C	SOX2_HMG_3	-7	0	+	0	0	.
chr12	113831180	113831181	chr12:113831181:C:T	rs116590798	C	T	C	SOX2_HMG_3	13	1	-	5.8947557274992635	-1.0139990518159567	AAACAATGGTTTTGAAT
chr12	113855508	113855509	chr12:113855509:G:A	rs4767148	G	A	G	SOX2_HMG_3	-19	0	+	0	0	.
chr12	113929121	113929122	chr12:113929122:C:T	rs117608271	C	T	C	SOX2_HMG_3	17	0	-	0	0	.
chr12	114115975	114115976	chr12:114115976:T:A	rs12297105	T	A	A	SOX2_HMG_3	14	1	+	5.062070619929594	7.774844464743888	CATCAAGGATAGTGTAG
chr12	114316454	114316455	chr12:114316455:G:C	rs76857415	G	C	G	SOX2_HMG_3	23	0	+	0	0	.
chr12	114396036	114396037	chr12:114396037:G:T	rs2114327	G	T	G	SOX2_HMG_3	-17	0	+	0	0	.
chr12	114675900	114675901	chr12:114675901:C:T	rs113723401	C	T	C	SOX2_HMG_3	-16	0	+	0	0	.
chr12	114752795	114752796	chr12:114752796:G:A	rs11067280	G	A	G	SOX2_HMG_3	19	0	+	0	0	.
chr12	114981690	114981691	chr12:114981691:T:C	rs7975876	T	C	T	SOX2_HMG_3	-8	0	+	0	0	.
chr12	115096393	115096394	chr12:115096394:T:C	rs7298045	T	C	T	SOX2_HMG_3	34	0	+	0	0	.
chr12	115102702	115102703	chr12:115102703:G:C	rs78114186	G	C	G	SOX2_HMG_3	20	0	-	0	0	.
chr12	115323697	115323698	chr12:115323698:T:C	rs11067529	T	C	T	SOX2_HMG_3	-6	0	-	0	0	.
chr12	115323702	115323703	chr12:115323703:A:T	rs11067530	A	T	T	SOX2_HMG_3	-11	0	-	0	0	.
chr12	115467757	115467758	chr12:115467758:A:G	rs77769656	A	G	A	SOX2_HMG_3	-18	0	+	0	0	.
chr12	115813430	115813431	chr12:115813431:C:T	rs697863	C	T	T	SOX2_HMG_3	-12	0	-	0	0	.
chr12	116060848	116060849	chr12:116060849:T:C	rs11067896	T	C	C	SOX2_HMG_3	-17	0	+	0	0	.
chr12	116130617	116130618	chr12:116130618:T:C	rs4767386	T	C	c	SOX2_HMG_3	-3	0	+	0	0	.
chr12	116456541	116456542	chr12:116456542:C:T	rs1028304091	C	T	C	SOX2_HMG_3	29	0	-	0	0	.
chr12	116456566	116456567	chr12:116456567:T:G	rs71469762	T	G	T	SOX2_HMG_3	4	1	-	2.6145141758337727	-4.294240603481446	AGTCAAAACCAGTGAGG
chr12	116490504	116490505	chr12:116490505:A:G	rs1241239	A	G	a	SOX2_HMG_3	26	0	-	0	0	.
chr12	116583402	116583403	chr12:116583403:C:G	rs11831824	C	G	C	SOX2_HMG_3	21	0	-	0	0	.
chr12	116631085	116631086	chr12:116631086:C:T	rs187819852	C	T	C	SOX2_HMG_3	1	1	-	3.1795302734125834	5.011177863491875	GGGCCATTTTATTGAAG
chr12	116714988	116714989	chr12:116714989:A:G	rs10507273	A	G	G	SOX2_HMG_3	24	0	-	0	0	.
chr12	116960642	116960643	chr12:116960643:T:C	rs4542506	T	C	C	SOX2_HMG_3	5	1	-	3.345189198239494	-3.5635655810757254	TTCCAATGGTAATGATG
chr12	117036245	117036246	chr12:117036246:A:G	rs7978495	A	G	A	SOX2_HMG_3	5	1	-	4.416328137922562	4.416328137922562	TGTCATTGTCATTGTAA
chr12	117083374	117083375	chr12:117083375:A:G	rs10744890	A	G	G	SOX2_HMG_3	19	0	-	0	0	.
chr12	117320102	117320103	chr12:117320103:G:A	rs4766843	G	A	G	SOX2_HMG_3	-13	0	+	0	0	.
chr12	117929003	117929004	chr12:117929004:G:A	rs714325	G	A	G	SOX2_HMG_3	-15	0	+	0	0	.
chr12	118499899	118499900	chr12:118499900:G:T	rs539248970	G	T	G	SOX2_HMG_3	1	1	+	5.563895575480403	4.389499313036377	GGTCAATGCCAGGGAGG
chr12	118901523	118901524	chr12:118901524:G:A	rs11069159	G	A	G	SOX2_HMG_3	24	0	-	0	0	.
chr12	118988370	118988371	chr12:118988371:T:C	rs11069218	T	C	t	SOX2_HMG_3	-9	0	+	0	0	.
chr12	119036281	119036282	chr12:119036282:C:G	rs1525971	C	G	G	SOX2_HMG_3	34	0	-	0	0	.
chr12	119075572	119075573	chr12:119075573:T:C	rs62635306	T	C	-	SOX2_HMG_3	36	0	+	0	0	.
chr12	119180085	119180086	chr12:119180086:A:G	rs73412044	A	G	A	SOX2_HMG_3	8	1	+	9.809492286604549	10.658536233968176	GAACAATGATAGTGTTA
chr12	119692103	119692104	chr12:119692104:A:G	rs146348186	A	G	A	SOX2_HMG_3	-20	0	-	0	0	.
chr12	120126570	120126571	chr12:120126571:A:T	rs60287150	A	T	A	SOX2_HMG_3	4	1	+	2.80587043216593	-4.102884347149288	ATTCATTGGAAGTGTTG
chr12	120182346	120182347	chr12:120182347:T:C	rs61063054	T	C	T	SOX2_HMG_3	12	1	+	6.006255497088796	-0.9024992822264244	AATCAATTATACTGACA
chr12	120231366	120231367	chr12:120231367:A:T	rs73415014	A	T	A	SOX2_HMG_3	6	1	-	2.926842258552317	-3.9819125207629034	ACACTATGGTATTGATC
chr12	120237213	120237214	chr12:120237214:A:C	rs79571853	A	C	-	SOX2_HMG_3	-13	0	-	0	0	.
chr12	120536706	120536707	chr12:120536707:C:T	rs614226	C	T	C	SOX2_HMG_3	3	1	+	6.148362476123995	-0.7603923031912263	GTTCAAAGCAATTGATA
chr12	120745366	120745367	chr12:120745367:C:T	rs73227016	C	T	C	SOX2_HMG_3	18	0	-	0	0	.
chr12	120792230	120792231	chr12:120792231:C:G	rs73229114	C	G	C	SOX2_HMG_3	-8	0	-	0	0	.
chr12	121244247	121244248	chr12:121244248:T:C	rs2686340	T	C	C	SOX2_HMG_3	26	0	-	0	0	.
chr12	122063730	122063731	chr12:122063731:G:A	rs116182070	G	A	G	SOX2_HMG_3	22	0	-	0	0	.
chr12	122129839	122129840	chr12:122129840:T:G	rs7487292	T	G	G	SOX2_HMG_3	4	1	-	4.0718625377978945	-2.836892241517325	GCTCAGTGGAAGTGAGG
chr12	122152329	122152330	chr12:122152330:T:C	rs2137200	T	C	C	SOX2_HMG_3	-19	0	+	0	0	.
chr12	122453344	122453345	chr12:122453345:T:C	rs141574901	T	C	t	SOX2_HMG_3	-9	0	-	0	0	.
chr12	122503613	122503614	chr12:122503614:T:C	rs12301352	T	C	T	SOX2_HMG_3	5	1	-	3.6963790959919116	-3.212375683323309	AATCAATCTTATTAAAA
chr12	122849485	122849486	chr12:122849486:C:G	rs2292134	C	G	C	SOX2_HMG_3	-15	0	-	0	0	.
chr12	123094490	123094491	chr12:123094491:G:A	rs73413223	G	A	G	SOX2_HMG_3	4	1	-	3.0830069685019095	3.0830069685019095	CTTCCATGGCATTGTGG
chr12	123267178	123267179	chr12:123267179:A:C	rs2271976	A	C	C	SOX2_HMG_3	2	1	-	1.450463909596185	-2.4171509250818546	TGTCAATGGGGGTGATG
chr12	123267715	123267716	chr12:123267716:C:T	rs10083067	C	T	C	SOX2_HMG_3	-18	0	+	0	0	.
chr12	123437082	123437083	chr12:123437083:T:C	rs78392487	T	C	T	SOX2_HMG_3	16	1	-	4.28419176794544	4.5578793843357115	TCTCCATTTTATTGAGA
chr12	123472201	123472202	chr12:123472202:A:G	rs3087496	A	G	A	SOX2_HMG_3	8	1	+	4.75261245622954	5.60165640359317	CAGCAATGATAGTGGCA
chr12	123713487	123713488	chr12:123713488:C:A	rs530069268	C	A	C	SOX2_HMG_3	-6	0	+	0	0	.
chr12	123868303	123868304	chr12:123868304:G:T	rs77819225	G	T	G	SOX2_HMG_3	-1	0	-	0	0	.
chr12	123908528	123908529	chr12:123908529:T:G	rs74624536	T	G	T	SOX2_HMG_3	10	1	-	2.5062087795135586	-4.402545999801662	AGGCAAGGTCAGTGAAA
chr12	124091011	124091012	chr12:124091012:T:A	rs825481	T	A	T	SOX2_HMG_3	10	1	-	4.55382679468053	-2.35492798463469	AAACAATTTGATTGAGA
chr12	124538217	124538218	chr12:124538218:G:T	rs74604062	G	T	G	SOX2_HMG_3	1	1	+	1.3820179581792824	0.20762169573525802	GGTCAAGGCCAGTGGGG
chr12	124693439	124693440	chr12:124693440:C:T	rs1554769	C	T	T	SOX2_HMG_3	-3	0	-	0	0	.
chr12	124909968	124909969	chr12:124909969:G:A	rs73417485	G	A	G	SOX2_HMG_3	22	0	-	0	0	.
chr12	124910008	124910009	chr12:124910009:G:C	rs189186050	G	C	G	SOX2_HMG_3	-18	0	-	0	0	.
chr12	124911671	124911672	chr12:124911672:G:A	rs200766456	G	A	G	SOX2_HMG_3	17	0	+	0	0	.
chr12	125056400	125056401	chr12:125056401:A:C	rs7304220	A	C	c	SOX2_HMG_3	18	0	+	0	0	.
chr12	125137715	125137716	chr12:125137716:G:A	rs12581512	G	A	G	SOX2_HMG_3	-17	0	-	0	0	.
chr12	125269218	125269219	chr12:125269219:A:C	rs4765238	A	C	A	SOX2_HMG_3	10	1	+	1.5495247511962262	-5.359230028118994	GAGCATTGCCAGTGACT
chr12	125298269	125298270	chr12:125298270:C:T	rs12824974	C	T	c	SOX2_HMG_3	35	0	-	0	0	.
chr12	126061769	126061770	chr12:126061770:T:C	rs758548	T	C	T	SOX2_HMG_3	20	0	+	0	0	.
chr12	126094119	126094120	chr12:126094120:T:G	rs147508012	T	G	T	SOX2_HMG_3	-20	0	-	0	0	.
chr12	126139617	126139618	chr12:126139618:T:C	rs7960175	T	C	T	SOX2_HMG_3	32	0	-	0	0	.
chr12	126467965	126467966	chr12:126467966:T:A	rs11058671	T	A	T	SOX2_HMG_3	-20	0	-	0	0	.
chr12	126524100	126524101	chr12:126524101:T:C	rs78150825	T	C	T	SOX2_HMG_3	-14	0	-	0	0	.
chr12	126999077	126999078	chr12:126999078:G:T	rs10773345	G	T	G	SOX2_HMG_3	34	0	+	0	0	.
chr12	127489307	127489308	chr12:127489308:C:T	rs117270399	C	T	C	SOX2_HMG_3	30	0	+	0	0	.
chr12	127595306	127595307	chr12:127595307:C:A	rs905408	C	A	A	SOX2_HMG_3	28	0	-	0	0	.
chr12	127606381	127606382	chr12:127606382:T:G	rs7955165	T	G	T	SOX2_HMG_3	-15	0	+	0	0	.
chr12	127648657	127648658	chr12:127648658:G:A	rs2242454	G	A	G	SOX2_HMG_3	35	0	-	0	0	.
chr12	127683058	127683059	chr12:127683059:G:A	rs7315902	G	A	g	SOX2_HMG_3	0	1	+	6.170250854802237	5.9496565757169435	GTTCTATGGCATTGAAT
chr12	128339967	128339968	chr12:128339968:T:C	rs1621093	T	C	T	SOX2_HMG_3	6	1	+	5.383246037818649	-1.5255087414965727	CATCAATGCAACTGTTT
chr12	128491290	128491291	chr12:128491291:T:C	rs7136651	T	C	C	SOX2_HMG_3	10	1	-	2.784811809442466	-4.123942969872755	CCTCAACGCTATTGTAT
chr12	128491294	128491295	chr12:128491295:G:A	rs7300144	G	A	G	SOX2_HMG_3	6	1	-	2.784811809442466	9.693566588757687	CCTCAACGCTATTGTAT
chr12	128491419	128491420	chr12:128491420:A:G	rs76303487	A	G	A	SOX2_HMG_3	4	1	+	4.3816324489037495	-2.527122330411472	CAGCAATGTCAGTGGGC
chr12	128500032	128500033	chr12:128500033:G:C	rs11608385	G	C	C	SOX2_HMG_3	16	1	-	5.319974924820207	7.319817419736751	TATGAATGCTAGTGAGC
chr12	128581173	128581174	chr12:128581174:C:A	rs7135555	C	A	A	SOX2_HMG_3	5	1	-	5.9308137395601745	5.9308137395601745	AATCAGTGGCAGTGACT
chr12	128763820	128763821	chr12:128763821:G:A	rs2398430	G	A	G	SOX2_HMG_3	-8	0	+	0	0	.
chr12	128763840	128763841	chr12:128763841:T:C	rs2398431	T	C	C	SOX2_HMG_3	12	1	+	3.1009996109849984	-3.807755168330222	GGACAATGTTGGTGAGA
chr12	128974342	128974343	chr12:128974343:T:C	rs76571605	T	C	t	SOX2_HMG_3	6	1	+	2.2000989034737337	-4.708655875841487	CAGCAATGCCTTTGAGC
chr12	129065169	129065170	chr12:129065170:C:T	rs3851668	C	T	C	SOX2_HMG_3	18	0	+	0	0	.
chr12	129119754	129119755	chr12:129119755:A:G	rs10734967	A	G	G	SOX2_HMG_3	1	1	+	2.950036069509018	1.118388479429727	CATGAATGGTAGGGATG
chr12	129185032	129185033	chr12:129185033:T:C	rs7298253	T	C	C	SOX2_HMG_3	2	1	+	3.8222905061689367	-1.18108156414665	AATCAATTATCGTGAGC
chr12	129367152	129367153	chr12:129367153:A:G	rs12319167	A	G	A	SOX2_HMG_3	30	0	-	0	0	.
chr12	129393867	129393868	chr12:129393868:C:T	rs117438223	C	T	C	SOX2_HMG_3	26	0	+	0	0	.
chr12	129502324	129502325	chr12:129502325:G:A	rs61945369	G	A	G	SOX2_HMG_3	12	1	-	2.6191021044642673	9.527856883779487	TAGCAATGGTAGCGAAC
chr12	129660190	129660191	chr12:129660191:A:G	rs10773692	A	G	A	SOX2_HMG_3	10	1	+	3.338288995609439	-3.5704657837057807	AATTACTGTTAGTGATA
chr12	129710832	129710833	chr12:129710833:G:A	rs61275798	G	A	G	SOX2_HMG_3	11	1	+	7.77175027863699	2.4961387496245915	TCTCAATGTCAGTGTGT
chr12	130006642	130006643	chr12:130006643:G:A	rs115732538	G	A	G	SOX2_HMG_3	11	1	+	5.007567715237113	-0.2680438137752852	CATCAAATGCAGTGATC
chr12	130006657	130006658	chr12:130006658:C:T	rs12307812	C	T	C	SOX2_HMG_3	26	0	+	0	0	.
chr12	130220097	130220098	chr12:130220098:T:A	rs11614173	T	A	T	SOX2_HMG_3	-17	0	+	0	0	.
chr12	130668200	130668201	chr12:130668201:T:A	rs60876022	T	A	T	SOX2_HMG_3	9	1	-	7.794571512597311	9.653146854544042	TCTCAATGCAATTGTGA
chr12	131130053	131130054	chr12:131130054:C:T	rs9669002	C	T	C	SOX2_HMG_3	-3	0	-	0	0	.
chr12	131188706	131188707	chr12:131188707:G:A	rs4430590	G	A	G	SOX2_HMG_3	-8	0	+	0	0	.
chr12	131362593	131362594	chr12:131362594:G:A	rs12314372	G	A	g	SOX2_HMG_3	0	1	-	3.5181122629783674	3.380783284929704	CGGCAATGAAAGTGACC
chr12	131362609	131362610	chr12:131362610:A:G	rs7138777	A	G	G	SOX2_HMG_3	-16	0	-	0	0	.
chr12	131521379	131521380	chr12:131521380:C:T	rs10773916	C	T	C	SOX2_HMG_3	-5	0	-	0	0	.
chr12	131583730	131583731	chr12:131583731:A:G	rs11246874	A	G	A	SOX2_HMG_3	4	1	+	6.252270339812176	-0.6564844395030451	CACCAATGAAATTGTAA
chr12	131636268	131636269	chr12:131636269:C:G	rs34974473	C	G	C	SOX2_HMG_3	-1	0	-	0	0	.
chr12	131963397	131963398	chr12:131963398:C:T	rs58728522	C	T	T	SOX2_HMG_3	13	1	-	4.764551724275463	-2.1442030550397577	CATCAATTCCTGTGAAA
chr12	132300935	132300936	chr12:132300936:T:C	rs28569099	T	C	T	SOX2_HMG_3	6	1	+	2.2114095576820447	-4.697345221633174	TCTCAATGCCATGGTGG
chr12	132359592	132359593	chr12:132359593:A:G	rs28473063	A	G	G	SOX2_HMG_3	6	1	-	1.9648022604912538	-4.943952518823966	CACCCATGACAGTGAAG
chr12	132773033	132773034	chr12:132773034:C:G	rs3741483	C	G	C	SOX2_HMG_3	26	0	-	0	0	.
chr12	132825800	132825801	chr12:132825801:T:C	rs879211422	T	C	T	SOX2_HMG_3	23	0	-	0	0	.
chr12	132825843	132825844	chr12:132825844:A:G	rs746059232	A	G	A	SOX2_HMG_3	-20	0	-	0	0	.
chr12	132899178	132899179	chr12:132899179:G:A	rs11147152	G	A	G	SOX2_HMG_3	31	0	+	0	0	.
chr12	132956745	132956746	chr12:132956746:A:C	chr12:132956746:A:C	A	C	A	SOX2_HMG_3	3	1	+	5.923216619116368	12.83197139843159	GGTAAATGTTAGTGTTA
chr12	133236885	133236886	chr12:133236886:G:C	rs148437181	G	C	.	SOX2_HMG_3	13	1	+	5.480515581535538	-1.4282391977796827	TTTCAAAGGTAGTGAAG
chr13	18250720	18250721	chr13:18250721:T:C	rs1335346869	T	C	.	SOX2_HMG_3	-11	0	-	0	0	.
chr13	19157765	19157766	chr13:19157766:T:C	rs1022917	T	C	C	SOX2_HMG_3	1	1	-	2.262354268736309	0.4307066786570173	GAGCAAGGGCAGTGAGC
chr13	19240620	19240621	chr13:19240621:A:G	rs7322424	A	G	A	SOX2_HMG_3	-16	0	+	0	0	.
chr13	19347934	19347935	chr13:19347935:A:G	rs2785535	A	G	a	SOX2_HMG_3	6	1	-	2.1903996219079898	-4.718355157407231	ACTCATTGGCAGTGTGG
chr13	19735716	19735717	chr13:19735717:A:G	rs11618455	A	G	A	SOX2_HMG_3	5	1	+	6.758926338548302	-0.14982844076691826	CTTCAATTTAATTGTGA
chr13	20219604	20219605	chr13:20219605:G:A	rs2313485	G	A	G	SOX2_HMG_3	20	0	+	0	0	.
chr13	20512459	20512460	chr13:20512460:G:A	rs7139733	G	A	G	SOX2_HMG_3	-17	0	+	0	0	.
chr13	20822827	20822828	chr13:20822828:T:A	rs2585895	T	A	T	SOX2_HMG_3	-20	0	+	0	0	.
chr13	20835538	20835539	chr13:20835539:C:T	rs7323504	C	T	C	SOX2_HMG_3	-6	0	-	0	0	.
chr13	20843954	20843955	chr13:20843955:T:G	rs716480	T	G	T	SOX2_HMG_3	1	1	-	3.793352193299894	0.7873083407765784	GAACAAATGCATTGAAA
chr13	21174970	21174971	chr13:21174971:A:G	rs9580014	A	G	.	SOX2_HMG_3	36	0	+	0	0	.
chr13	22925366	22925367	chr13:22925367:G:T	rs61688640	G	T	G	SOX2_HMG_3	10	1	+	4.042544713991369	4.042544713991369	AATCAAAGATGTTGATG
chr13	23182894	23182895	chr13:23182895:A:G	rs544497	A	G	A	SOX2_HMG_3	15	1	-	3.038591147109158	0.19588199093229974	TGTCAACTGCAGTGATC
chr13	23321458	23321459	chr13:23321459:T:C	rs521600	T	C	T	SOX2_HMG_3	-16	0	+	0	0	.
chr13	23490401	23490402	chr13:23490402:G:A	rs79598955	G	A	A	SOX2_HMG_3	-17	0	+	0	0	.
chr13	23516317	23516318	chr13:23516318:C:T	rs7334346	C	T	C	SOX2_HMG_3	3	1	-	3.570313067890479	3.570313067890479	AATGAATGCTAATGATT
chr13	23750407	23750408	chr13:23750408:G:A	rs78518128	G	A	g	SOX2_HMG_3	9	1	-	7.129101982736856	7.935772116673902	TGTCAAGGTCATTGAAA
chr13	24068789	24068790	chr13:24068790:T:A	rs9551049	T	A	T	SOX2_HMG_3	28	0	+	0	0	.
chr13	24120347	24120348	chr13:24120348:A:G	rs1325664	A	G	A	SOX2_HMG_3	9	1	-	3.1847305494675444	2.3780604155304985	TGTCAAAGTTAGTGACC
chr13	24122368	24122369	chr13:24122369:C:T	rs9551064	C	T	C	SOX2_HMG_3	-6	0	+	0	0	.
chr13	24186768	24186769	chr13:24186769:G:A	rs2760359	G	A	A	SOX2_HMG_3	7	1	+	5.006611532327323	2.2778244117659883	CAACAACGCTATTGAGG
chr13	24459061	24459062	chr13:24459062:T:A	rs1130941	T	A	.	SOX2_HMG_3	18	0	-	0	0	.
chr13	24459088	24459089	chr13:24459089:A:G	rs1050107	A	G	.	SOX2_HMG_3	-9	0	-	0	0	.
chr13	24588416	24588417	chr13:24588417:T:C	rs66521045	T	C	.	SOX2_HMG_3	12	1	+	4.7774142298889615	-2.131340549426259	GGTCATTTGAATTGAAA
chr13	24723465	24723466	chr13:24723466:G:A	rs2121255	G	A	G	SOX2_HMG_3	29	0	+	0	0	.
chr13	24960652	24960653	chr13:24960653:A:G	rs2497576	A	G	a	SOX2_HMG_3	12	1	-	4.7774142298889615	-2.131340549426259	GGTCATTTGAATTGAAA
chr13	25180557	25180558	chr13:25180558:C:T	rs878205	C	T	C	SOX2_HMG_3	16	1	-	2.8139031651691906	2.540215548778919	GAACAATGGTACTGTCG
chr13	25181393	25181394	chr13:25181394:A:T	rs7987107	A	T	A	SOX2_HMG_3	17	0	-	0	0	.
chr13	25189362	25189363	chr13:25189363:C:G	rs9581293	C	G	G	SOX2_HMG_3	-13	0	+	0	0	.
chr13	25921169	25921170	chr13:25921170:T:C	rs1181998	T	C	T	SOX2_HMG_3	5	1	-	2.311633174196411	-4.597121605118808	ACGCAATGGGAGTGAGG
chr13	26469759	26469760	chr13:26469760:T:C	rs4427654	T	C	C	SOX2_HMG_3	-10	0	-	0	0	.
chr13	26910445	26910446	chr13:26910446:C:G	rs9319325	C	G	C	SOX2_HMG_3	31	0	-	0	0	.
chr13	26977565	26977566	chr13:26977566:A:T	rs1410437	A	T	T	SOX2_HMG_3	16	1	+	3.25424071449138	2.7248578891054613	GAACAATGCCAGTAAGA
chr13	27124862	27124863	chr13:27124863:A:G	rs77527164	A	G	a	SOX2_HMG_3	-8	0	+	0	0	.
chr13	27406569	27406570	chr13:27406570:G:C	rs3848004	G	C	C	SOX2_HMG_3	15	1	+	1.9415254319162618	0.7661922940070267	GGGCAATGGTGTTGTGG
chr13	27803608	27803609	chr13:27803609:G:A	rs6491230	G	A	a	SOX2_HMG_3	7	1	+	4.002131988169777	1.273344867608443	GAGCTATGCTAGTGATC
chr13	28032131	28032132	chr13:28032132:T:G	rs9512989	T	G	T	SOX2_HMG_3	18	0	-	0	0	.
chr13	28455612	28455613	chr13:28455613:G:T	rs77283462	G	T	G	SOX2_HMG_3	19	0	-	0	0	.
chr13	28534349	28534350	chr13:28534350:A:G	rs9551485	A	G	a	SOX2_HMG_3	11	1	-	6.623384875218174	-0.06930662301417317	TATGAATTGTATTGAGT
chr13	28550280	28550281	chr13:28550281:C:T	rs76244930	C	T	C	SOX2_HMG_3	24	0	+	0	0	.
chr13	28559718	28559719	chr13:28559719:T:C	rs56999442	T	C	C	SOX2_HMG_3	10	1	-	3.6951029712203414	-3.213651808094879	GATGGATGGTAGTGATG
chr13	28564118	28564119	chr13:28564119:T:C	rs7320190	T	C	C	SOX2_HMG_3	29	0	+	0	0	.
chr13	28626588	28626589	chr13:28626589:T:C	rs1573522	T	C	C	SOX2_HMG_3	36	0	-	0	0	.
chr13	28742400	28742401	chr13:28742401:G:A	rs12867487	G	A	G	SOX2_HMG_3	31	0	+	0	0	.
chr13	28963833	28963834	chr13:28963834:C:G	rs118155935	C	G	C	SOX2_HMG_3	26	0	-	0	0	.
chr13	28963857	28963858	chr13:28963858:A:T	rs595628	A	T	T	SOX2_HMG_3	2	1	-	2.2683592049695136	-1.5992556297085279	GGTGAATGCCATTGTGC
chr13	29073140	29073141	chr13:29073141:A:G	rs9508257	A	G	A	SOX2_HMG_3	-3	0	-	0	0	.
chr13	29516284	29516285	chr13:29516285:C:T	rs3011626	C	T	C	SOX2_HMG_3	15	1	+	2.5520065640352443	5.394715720212103	AATCCATGGCAGTGGCG
chr13	29730427	29730428	chr13:29730428:C:T	rs2388242	C	T	C	SOX2_HMG_3	-6	0	+	0	0	.
chr13	29730451	29730452	chr13:29730452:G:A	rs12869874	G	A	G	SOX2_HMG_3	18	0	+	0	0	.
chr13	29852626	29852627	chr13:29852627:T:G	rs80171055	T	G	T	SOX2_HMG_3	23	0	-	0	0	.
chr13	29862094	29862095	chr13:29862095:T:C	rs141338098	T	C	T	SOX2_HMG_3	5	1	-	6.68917204812309	-0.21958273119213073	CCACAATGCTAGTGAGT
chr13	29925871	29925872	chr13:29925872:T:G	rs9508593	T	G	G	SOX2_HMG_3	-4	0	-	0	0	.
chr13	30072927	30072928	chr13:30072928:A:T	rs9506256	A	T	T	SOX2_HMG_3	-1	0	-	0	0	.
chr13	30104450	30104451	chr13:30104451:T:A	rs9551836	T	A	T	SOX2_HMG_3	14	1	-	4.845340326944283	2.132566482129989	CAGCAATTCTACTGATG
chr13	30293990	30293991	chr13:30293991:T:C	rs9506282	T	C	T	SOX2_HMG_3	-8	0	+	0	0	.
chr13	30307603	30307604	chr13:30307604:A:G	rs73445810	A	G	A	SOX2_HMG_3	-4	0	+	0	0	.
chr13	30307620	30307621	chr13:30307621:G:A	chr13:30307621:G:A	G	A	G	SOX2_HMG_3	13	1	+	2.777990916344587	-4.130763862970632	AGACAGTGACATTGAGG
chr13	30307626	30307627	chr13:30307627:G:A	rs187937337	G	A	G	SOX2_HMG_3	19	0	+	0	0	.
chr13	30702160	30702161	chr13:30702161:G:C	rs9506345	G	C	G	SOX2_HMG_3	3	1	-	3.3936784351672444	-3.515076344147976	GCTCAATCCTAGTGACT
chr13	31050606	31050607	chr13:31050607:A:G	rs17537328	A	G	A	SOX2_HMG_3	7	1	+	3.406158261517876	6.134945382079213	GTGCAATACCATTGTGG
chr13	31751013	31751014	chr13:31751014:G:A	rs7327232	G	A	G	SOX2_HMG_3	25	0	+	0	0	.
chr13	33006716	33006717	chr13:33006717:A:G	rs371126	A	G	G	SOX2_HMG_3	-7	0	+	0	0	.
chr13	33107029	33107030	chr13:33107030:C:A	rs554588	C	A	C	SOX2_HMG_3	-15	0	+	0	0	.
chr13	33115883	33115884	chr13:33115884:A:G	rs9527088	A	G	A	SOX2_HMG_3	34	0	+	0	0	.
chr13	33124584	33124585	chr13:33124585:A:G	rs538224	A	G	A	SOX2_HMG_3	-20	0	+	0	0	.
chr13	33166079	33166080	chr13:33166080:T:C	rs17078655	T	C	T	SOX2_HMG_3	29	0	-	0	0	.
chr13	33166080	33166081	chr13:33166081:G:A	rs76861306	G	A	C	SOX2_HMG_3	28	0	-	0	0	.
chr13	33176043	33176044	chr13:33176044:T:A	rs11841728	T	A	T	SOX2_HMG_3	9	1	-	4.786157490023748	6.644732831970477	GAGCAAAGGAATTGAAA
chr13	33180594	33180595	chr13:33180595:G:A	rs748953611	G	A	G	SOX2_HMG_3	21	0	-	0	0	.
chr13	33180615	33180616	chr13:33180616:C:G	rs1337834161	C	G	C	SOX2_HMG_3	0	1	-	2.9486010895204506	2.2035341878091286	GATCAATGACCTTGGAC
chr13	33252637	33252638	chr13:33252638:A:G	rs17597518	A	G	G	SOX2_HMG_3	-9	0	-	0	0	.
chr13	33281685	33281686	chr13:33281686:C:T	rs74556393	C	T	C	SOX2_HMG_3	16	1	-	2.810700800214147	2.537013183823876	GTACAATGTCTTTGAGG
chr13	33281697	33281698	chr13:33281698:T:C	rs78398649	T	C	T	SOX2_HMG_3	4	1	-	2.810700800214147	-4.098053979101072	GTACAATGTCTTTGAGG
chr13	33283542	33283543	chr13:33283543:A:G	rs4445771	A	G	G	SOX2_HMG_3	-2	0	-	0	0	.
chr13	33629923	33629924	chr13:33629924:C:T	rs9315232	C	T	T	SOX2_HMG_3	21	0	-	0	0	.
chr13	33737194	33737195	chr13:33737195:C:A	rs9598044	C	A	C	SOX2_HMG_3	26	0	-	0	0	.
chr13	33743709	33743710	chr13:33743710:C:T	rs9538521	C	T	C	SOX2_HMG_3	-6	0	-	0	0	.
chr13	33744048	33744049	chr13:33744049:G:A	rs12857048	G	A	G	SOX2_HMG_3	27	0	-	0	0	.
chr13	33744071	33744072	chr13:33744072:T:C	rs7139476	T	C	C	SOX2_HMG_3	4	1	-	3.8817596532626197	-3.0269951260526016	TGGCAATGTCAGTGTGC
chr13	33862012	33862013	chr13:33862013:G:A	rs78255357	G	A	g	SOX2_HMG_3	-19	0	+	0	0	.
chr13	34428333	34428334	chr13:34428334:A:T	rs73181242	A	T	A	SOX2_HMG_3	8	1	-	4.95379975328971	3.967287886061418	AAACAAGGTTATTGACA
chr13	34817264	34817265	chr13:34817265:C:T	rs9599692	C	T	C	SOX2_HMG_3	-17	0	+	0	0	.
chr13	34817286	34817287	chr13:34817287:A:G	rs79327294	A	G	A	SOX2_HMG_3	5	1	+	3.0681094115221317	-3.8406453677930874	ATGCAATGGAATGGATG
chr13	35164744	35164745	chr13:35164745:G:A	rs76006897	G	A	G	SOX2_HMG_3	-8	0	+	0	0	.
chr13	35469593	35469594	chr13:35469594:C:T	rs143765635	C	T	C	SOX2_HMG_3	31	0	+	0	0	.
chr13	35594364	35594365	chr13:35594365:C:T	rs150804124	C	T	C	SOX2_HMG_3	3	1	+	5.892381645997673	-1.0163731333175479	AGGCAATTTCAGTGTTA
chr13	35724161	35724162	chr13:35724162:G:A	rs7318433	G	A	G	SOX2_HMG_3	18	0	+	0	0	.
chr13	35781542	35781543	chr13:35781543:C:T	rs9545332	C	T	T	SOX2_HMG_3	11	1	-	4.578492213535268	-0.6971193154771298	TCACAATGAAAGTGAGT
chr13	35979423	35979424	chr13:35979424:A:C	chr13:35979424:A:C	A	C	A	SOX2_HMG_3	18	0	-	0	0	.
chr13	36155556	36155557	chr13:36155557:G:C	rs1928018	G	C	C	SOX2_HMG_3	-9	0	-	0	0	.
chr13	36198243	36198244	chr13:36198244:G:A	rs2149423	G	A	A	SOX2_HMG_3	-1	0	+	0	0	.
chr13	36454871	36454872	chr13:36454872:A:C	rs9576061	A	C	A	SOX2_HMG_3	30	0	+	0	0	.
chr13	36904368	36904369	chr13:36904369:C:T	rs527929	C	T	T	SOX2_HMG_3	0	1	-	5.615314485213423	5.394720206128129	GTGCAATTTTAGTGACA
chr13	37059120	37059121	chr13:37059121:A:C	rs572888885	A	C	a	SOX2_HMG_3	1	1	+	7.77255574179747	4.766511889274154	TATCAATTCTACTGATT
chr13	37395160	37395161	chr13:37395161:C:T	rs4943503	C	T	C	SOX2_HMG_3	-8	0	-	0	0	.
chr13	37786590	37786591	chr13:37786591:C:T	rs7993498	C	T	C	SOX2_HMG_3	-1	0	-	0	0	.
chr13	37919462	37919463	chr13:37919463:A:T	rs13378806	A	T	A	SOX2_HMG_3	-2	0	+	0	0	.
chr13	38399156	38399157	chr13:38399157:T:C	rs151218375	T	C	T	SOX2_HMG_3	33	0	-	0	0	.
chr13	38399203	38399204	chr13:38399204:A:G	rs140365958	A	G	A	SOX2_HMG_3	-14	0	-	0	0	.
chr13	38742915	38742916	chr13:38742916:G:A	rs2442356	G	A	A	SOX2_HMG_3	36	0	+	0	0	.
chr13	39024257	39024258	chr13:39024258:C:G	rs1326404	C	G	G	SOX2_HMG_3	9	1	+	4.631808726492939	-1.0008715106701123	AAGCAATTTCACTGATT
chr13	39590510	39590511	chr13:39590511:A:T	rs9548835	A	T	A	SOX2_HMG_3	5	1	+	4.708482040463695	-2.200272738851525	GATCAATTCTTGTGACA
chr13	39969031	39969032	chr13:39969032:T:C	rs7993267	T	C	T	SOX2_HMG_3	-12	0	+	0	0	.
chr13	39969355	39969356	chr13:39969356:T:C	rs9549021	T	C	T	SOX2_HMG_3	32	0	-	0	0	.
chr13	40065918	40065919	chr13:40065919:A:G	rs549100580	A	G	A	SOX2_HMG_3	23	0	+	0	0	.
chr13	40076862	40076863	chr13:40076863:G:A	rs414770	G	A	A	SOX2_HMG_3	3	1	-	1.9994373810878674	-4.909317398227351	AGTCATTGTGATTGAGG
chr13	40183633	40183634	chr13:40183634:A:T	rs9549095	A	T	A	SOX2_HMG_3	23	0	-	0	0	.
chr13	40340402	40340403	chr13:40340403:G:A	rs4941970	G	A	A	SOX2_HMG_3	17	0	+	0	0	.
chr13	40799117	40799118	chr13:40799118:G:A	rs41396747	G	A	.	SOX2_HMG_3	25	0	+	0	0	.
chr13	40878684	40878685	chr13:40878685:T:C	rs7997536	T	C	C	SOX2_HMG_3	25	0	-	0	0	.
chr13	40878722	40878723	chr13:40878723:T:C	rs7997560	T	C	C	SOX2_HMG_3	-13	0	-	0	0	.
chr13	41179673	41179674	chr13:41179674:T:C	rs56214608	T	C	t	SOX2_HMG_3	5	1	-	3.942086846464086	-2.9666679328511343	GGTCAATATCAGTGCAA
chr13	41216447	41216448	chr13:41216448:A:C	rs74345847	A	C	A	SOX2_HMG_3	-2	0	+	0	0	.
chr13	41313256	41313257	chr13:41313257:G:C	chr13:41313257:G:C	G	C	G	SOX2_HMG_3	27	0	+	0	0	.
chr13	41650915	41650916	chr13:41650916:T:C	rs12861799	T	C	C	SOX2_HMG_3	6	1	+	3.140807981503747	-3.7679467978114736	GGCCAATGTGAGTGAAG
chr13	41652486	41652487	chr13:41652487:A:T	rs9562329	A	T	A	SOX2_HMG_3	32	0	-	0	0	.
chr13	41746690	41746691	chr13:41746691:T:A	rs10507497	T	A	A	SOX2_HMG_3	19	0	+	0	0	.
chr13	41751058	41751059	chr13:41751059:A:G	rs12584644	A	G	A	SOX2_HMG_3	29	0	+	0	0	.
chr13	41960014	41960015	chr13:41960015:A:G	rs117166704	A	G	A	SOX2_HMG_3	8	1	-	7.297068140372428	6.425331787736566	TGTCAATGTCAGTGCTG
chr13	41974842	41974843	chr13:41974843:A:G	rs7328352	A	G	A	SOX2_HMG_3	-3	0	-	0	0	.
chr13	42066204	42066205	chr13:42066205:A:G	rs6561033	A	G	A	SOX2_HMG_3	9	1	-	5.613083140785367	4.806413006848322	TCACAATTGTATTGTTT
chr13	42164974	42164975	chr13:42164975:C:G	chr13:42164975:C:G	C	G	C	SOX2_HMG_3	19	0	+	0	0	.
chr13	42524191	42524192	chr13:42524192:A:G	rs4942139	A	G	A	SOX2_HMG_3	-14	0	-	0	0	.
chr13	42524210	42524211	chr13:42524211:A:G	rs4941432	A	G	A	SOX2_HMG_3	-7	0	+	0	0	.
chr13	42559278	42559279	chr13:42559279:T:C	rs66939206	T	C	T	SOX2_HMG_3	5	1	-	2.8616759680647657	-4.047078811250455	ACTCAATGGGAGTGGTT
chr13	42696380	42696381	chr13:42696381:C:T	rs1169791	C	T	c	SOX2_HMG_3	24	0	-	0	0	.
chr13	42877309	42877310	chr13:42877310:T:C	rs80092417	T	C	T	SOX2_HMG_3	5	1	-	3.6035928873332965	-3.305161891981924	GATGAATGGTTTTGAAA
chr13	43049293	43049294	chr13:43049294:A:G	rs17064072	A	G	A	SOX2_HMG_3	-18	0	-	0	0	.
chr13	43222143	43222144	chr13:43222144:C:A	rs61950455	C	A	C	SOX2_HMG_3	23	0	-	0	0	.
chr13	43343987	43343988	chr13:43343988:G:A	rs1317310	G	A	A	SOX2_HMG_3	3	1	-	11.941965389757737	5.0332106104425165	ACTCAATGCCAGTGATT
chr13	43488502	43488503	chr13:43488503:C:A	rs115017037	C	A	C	SOX2_HMG_3	24	0	+	0	0	.
chr13	43546851	43546852	chr13:43546852:T:C	rs9316034	T	C	T	SOX2_HMG_3	35	0	-	0	0	.
chr13	43788089	43788090	chr13:43788090:T:C	rs77634831	T	C	T	SOX2_HMG_3	-3	0	+	0	0	.
chr13	43789000	43789001	chr13:43789001:A:G	rs75651784	A	G	A	SOX2_HMG_3	17	0	-	0	0	.
chr13	44050602	44050603	chr13:44050603:G:T	rs78612588	G	T	G	SOX2_HMG_3	32	0	-	0	0	.
chr13	44126717	44126718	chr13:44126718:G:A	rs9567373	G	A	G	SOX2_HMG_3	-5	0	+	0	0	.
chr13	44622817	44622818	chr13:44622818:T:G	rs7320846	T	G	G	SOX2_HMG_3	2	1	+	4.7498162643360455	0.8822014296580045	TATCAAAACTAGTGAAA
chr13	44690505	44690506	chr13:44690506:T:G	rs144795749	T	G	T	SOX2_HMG_3	-3	0	+	0	0	.
chr13	44768316	44768317	chr13:44768317:C:T	rs1415641	C	T	C	SOX2_HMG_3	33	0	-	0	0	.
chr13	45660180	45660181	chr13:45660181:C:T	rs73189626	C	T	C	SOX2_HMG_3	29	0	+	0	0	.
chr13	45737560	45737561	chr13:45737561:A:G	rs73189698	A	G	A	SOX2_HMG_3	27	0	-	0	0	.
chr13	45807758	45807759	chr13:45807759:G:C	rs188644762	G	C	G	SOX2_HMG_3	33	0	-	0	0	.
chr13	45807788	45807789	chr13:45807789:G:A	rs719401	G	A	A	SOX2_HMG_3	3	1	-	3.6704753787031605	-3.238279400612059	ATGCAATGTCAATGATT
chr13	45807790	45807791	chr13:45807791:A:G	rs76807011	A	G	A	SOX2_HMG_3	1	1	-	3.6704753787031605	3.6704753787031605	ATGCAATGTCAATGATT
chr13	45882791	45882792	chr13:45882792:A:G	rs78074044	A	G	A	SOX2_HMG_3	33	0	-	0	0	.
chr13	46281280	46281281	chr13:46281281:A:T	rs11618078	A	T	A	SOX2_HMG_3	30	0	-	0	0	.
chr13	46306099	46306100	chr13:46306100:A:G	rs2764585	A	G	A	SOX2_HMG_3	20	0	+	0	0	.
chr13	46560535	46560536	chr13:46560536:G:A	rs912433	G	A	A	SOX2_HMG_3	35	0	+	0	0	.
chr13	46575732	46575733	chr13:46575733:T:A	rs17068387	T	A	T	SOX2_HMG_3	16	1	+	4.235949767032567	4.765332592418486	TTTAAATGGAATTGAAT
chr13	47433682	47433683	chr13:47433683:C:T	rs9595687	C	T	c	SOX2_HMG_3	-10	0	+	0	0	.
chr13	47893731	47893732	chr13:47893732:A:C	rs9534856	A	C	A	SOX2_HMG_3	6	1	-	3.5588832746947316	-3.349871504620488	GATCAATGTTTGTTATA
chr13	48210351	48210352	chr13:48210352:T:C	rs187519156	T	C	T	SOX2_HMG_3	7	1	-	5.439720262044278	8.168507382605613	GCACAATAGTAGTGAGT
chr13	48210356	48210357	chr13:48210357:T:A	rs192088366	T	A	T	SOX2_HMG_3	2	1	-	5.439720262044278	9.30733509672232	GCACAATAGTAGTGAGT
chr13	48533825	48533826	chr13:48533826:T:A	rs9316395	T	A	A	SOX2_HMG_3	-16	0	-	0	0	.
chr13	48629698	48629699	chr13:48629699:G:A	rs59927903	G	A	A	SOX2_HMG_3	-3	0	+	0	0	.
chr13	48730083	48730084	chr13:48730084:A:G	rs1323538	A	G	G	SOX2_HMG_3	-2	0	+	0	0	.
chr13	48730105	48730106	chr13:48730106:G:T	rs1323537	G	T	G	SOX2_HMG_3	20	0	+	0	0	.
chr13	48860498	48860499	chr13:48860499:C:T	rs2217142	C	T	C	SOX2_HMG_3	-13	0	+	0	0	.
chr13	48876401	48876402	chr13:48876402:C:A	rs141003967	C	A	C	SOX2_HMG_3	7	1	-	1.7540393365624467	-0.2906711681710895	GATCAAGGGTTGTGAGA
chr13	49078284	49078285	chr13:49078285:G:A	rs1359066	G	A	G	SOX2_HMG_3	-9	0	-	0	0	.
chr13	49840397	49840398	chr13:49840398:G:A	rs12585879	G	A	G	SOX2_HMG_3	-13	0	+	0	0	.
chr13	49840415	49840416	chr13:49840416:A:C	rs77579290	A	C	A	SOX2_HMG_3	5	1	+	3.7330099167704476	-3.17574486254477	CTGCAATGTCCTTGATG
chr13	49859450	49859451	chr13:49859451:G:A	rs76225850	G	A	G	SOX2_HMG_3	0	1	-	2.718997893165088	2.5816689151164236	CATCATTGAAATTGGGG
chr13	50156896	50156897	chr13:50156897:A:G	rs889800377	A	G	A	SOX2_HMG_3	21	0	-	0	0	.
chr13	50167950	50167951	chr13:50167951:G:A	rs1798972	G	A	A	SOX2_HMG_3	-13	0	+	0	0	.
chr13	50306347	50306348	chr13:50306348:G:A	rs71436222	G	A	G	SOX2_HMG_3	3	1	+	4.727324876620465	4.727324876620465	GTTGAATTCTATTGAAA
chr13	50357428	50357429	chr13:50357429:G:T	rs12871645	G	T	G	SOX2_HMG_3	-5	0	-	0	0	.
chr13	50586526	50586527	chr13:50586527:A:G	rs1239695	A	G	G	SOX2_HMG_3	-5	0	-	0	0	.
chr13	50613751	50613752	chr13:50613752:A:G	rs139248268	A	G	A	SOX2_HMG_3	24	0	-	0	0	.
chr13	50613786	50613787	chr13:50613787:C:T	rs771740458	C	T	C	SOX2_HMG_3	-11	0	-	0	0	.
chr13	50706553	50706554	chr13:50706554:G:A	rs797503	G	A	A	SOX2_HMG_3	31	0	-	0	0	.
chr13	50708547	50708548	chr13:50708548:G:A	rs797510	G	A	G	SOX2_HMG_3	-5	0	+	0	0	.
chr13	50745817	50745818	chr13:50745818:T:C	rs139168771	T	C	T	SOX2_HMG_3	33	0	+	0	0	.
chr13	50801834	50801835	chr13:50801835:A:G	rs9591364	A	G	A	SOX2_HMG_3	26	0	+	0	0	.
chr13	50891646	50891647	chr13:50891647:C:G	rs9568487	C	G	C	SOX2_HMG_3	29	0	-	0	0	.
chr13	50894243	50894244	chr13:50894244:G:A	rs11842683	G	A	A	SOX2_HMG_3	-6	0	+	0	0	.
chr13	51067903	51067904	chr13:51067904:T:C	rs9568502	T	C	T	SOX2_HMG_3	10	1	-	5.20546042209131	-1.7032943572239105	TGTCTATGCAATTGAAA
chr13	51117002	51117003	chr13:51117003:T:C	rs59612004	T	C	T	SOX2_HMG_3	17	0	+	0	0	.
chr13	51159555	51159556	chr13:51159556:C:G	rs9568536	C	G	C	SOX2_HMG_3	29	0	-	0	0	.
chr13	51322182	51322183	chr13:51322183:C:T	rs9535644	C	T	C	SOX2_HMG_3	30	0	-	0	0	.
chr13	53080276	53080277	chr13:53080277:C:T	rs75664078	C	T	C	SOX2_HMG_3	-17	0	-	0	0	.
chr13	53327974	53327975	chr13:53327975:A:G	rs9536394	A	G	A	SOX2_HMG_3	21	0	+	0	0	.
chr13	53356675	53356676	chr13:53356676:T:C	rs1373271	T	C	T	SOX2_HMG_3	11	1	+	4.902800512283148	-1.7898909859491983	TTTAAATGTAATTGAAA
chr13	55165619	55165620	chr13:55165620:G:A	rs3120869	G	A	G	SOX2_HMG_3	9	1	-	2.15686155718329	2.9635316911203358	GGGCAGTGGCAGTGAGA
chr13	55200443	55200444	chr13:55200444:A:G	rs7995821	A	G	A	SOX2_HMG_3	11	1	-	5.437415651415568	-1.2552758468167795	GATCATTGCTATTGGGG
chr13	55389794	55389795	chr13:55389795:A:G	rs3105043	A	G	G	SOX2_HMG_3	-7	0	-	0	0	.
chr13	55425071	55425072	chr13:55425072:A:G	rs2937338	A	G	G	SOX2_HMG_3	14	1	-	4.515670734919617	0.3961458741672175	TATCAATGACAATGTGT
chr13	55435986	55435987	chr13:55435987:G:A	rs2315881	G	A	G	SOX2_HMG_3	-5	0	-	0	0	.
chr13	56508447	56508448	chr13:56508448:G:A	rs7985742	G	A	G	SOX2_HMG_3	26	0	+	0	0	.
chr13	56508456	56508457	chr13:56508457:T:G	rs7986793	T	G	G	SOX2_HMG_3	35	0	+	0	0	.
chr13	56860459	56860460	chr13:56860460:G:C	rs7333137	G	C	G	SOX2_HMG_3	33	0	-	0	0	.
chr13	57450524	57450525	chr13:57450525:G:A	rs2167070	G	A	G	SOX2_HMG_3	-15	0	+	0	0	.
chr13	57813798	57813799	chr13:57813799:A:G	rs78936035	A	G	A	SOX2_HMG_3	21	0	+	0	0	.
chr13	58567031	58567032	chr13:58567032:G:A	rs78852312	G	A	G	SOX2_HMG_3	34	0	-	0	0	.
chr13	58802271	58802272	chr13:58802272:A:G	rs9538215	A	G	A	SOX2_HMG_3	12	1	-	4.226676245973344	-2.682078533341877	CATAAATGTCATTGTGC
chr13	59127697	59127698	chr13:59127698:C:T	rs74084015	C	T	C	SOX2_HMG_3	13	1	-	5.50261493213195	-1.4061398471832711	AAACAATTACAGTGTAA
chr13	59394954	59394955	chr13:59394955:A:G	rs9538402	A	G	A	SOX2_HMG_3	-2	0	+	0	0	.
chr13	59585906	59585907	chr13:59585907:A:G	rs595315	A	G	G	SOX2_HMG_3	19	0	-	0	0	.
chr13	59585930	59585931	chr13:59585931:G:A	rs506806	G	A	G	SOX2_HMG_3	-5	0	-	0	0	.
chr13	59602117	59602118	chr13:59602118:A:G	rs474813	A	G	A	SOX2_HMG_3	11	1	-	8.922558308079525	2.2298668098471777	CACCAATATTATTGAGG
chr13	59691659	59691660	chr13:59691660:G:A	rs75324918	G	A	G	SOX2_HMG_3	28	0	+	0	0	.
chr13	59914687	59914688	chr13:59914688:T:G	rs144524763	T	G	T	SOX2_HMG_3	30	0	+	0	0	.
chr13	59971998	59971999	chr13:59971999:A:G	rs2670487	A	G	A	SOX2_HMG_3	24	0	-	0	0	.
chr13	60147505	60147506	chr13:60147506:C:T	rs1337645	C	T	T	SOX2_HMG_3	7	1	-	2.7522131407576866	0.023426020196350983	GATCAGTGTCAGTTATA
chr13	60664016	60664017	chr13:60664017:A:G	rs9528186	A	G	A	SOX2_HMG_3	18	0	-	0	0	.
chr13	60766615	60766616	chr13:60766616:T:C	rs1399141	T	C	C	SOX2_HMG_3	15	1	+	7.571043177112109	4.728334020935252	GATGAATATAATTGATG
chr13	61149274	61149275	chr13:61149275:G:A	rs9563888	G	A	G	SOX2_HMG_3	34	0	-	0	0	.
chr13	61149324	61149325	chr13:61149325:G:A	rs9539048	G	A	A	SOX2_HMG_3	-16	0	-	0	0	.
chr13	61275391	61275392	chr13:61275392:G:C	rs79930573	G	C	G	SOX2_HMG_3	18	0	+	0	0	.
chr13	61642129	61642130	chr13:61642130:C:T	rs2153569	C	T	C	SOX2_HMG_3	-3	0	-	0	0	.
chr13	61675618	61675619	chr13:61675619:C:T	rs9598336	C	T	C	SOX2_HMG_3	3	1	+	9.571418594878097	2.6626638155628775	CAGCAATGAAATTGAAT
chr13	61679571	61679572	chr13:61679572:G:A	rs4886360	G	A	G	SOX2_HMG_3	4	1	+	4.915984826743885	11.824739606059104	GATCGATGTGATTGATT
chr13	62143780	62143781	chr13:62143781:G:A	rs55703528	G	A	g	SOX2_HMG_3	31	0	+	0	0	.
chr13	62305197	62305198	chr13:62305198:G:A	rs309104	G	A	G	SOX2_HMG_3	7	1	+	4.42193346397758	1.6931463434162446	TAGCAAGGTTATTGTTA
chr13	62357881	62357882	chr13:62357882:A:C	rs309091	A	C	c	SOX2_HMG_3	15	1	-	3.81123091102768	2.143854892760057	AATCAATGGCTTTAATA
chr13	62798774	62798775	chr13:62798775:C:T	rs9570737	C	T	-	SOX2_HMG_3	-10	0	+	0	0	.
chr13	62909841	62909842	chr13:62909842:A:G	rs115154874	A	G	A	SOX2_HMG_3	13	1	+	6.893764052929505	13.802518832244726	AATCAATATCATTAAAA
chr13	63208001	63208002	chr13:63208002:T:C	rs34396405	T	C	T	SOX2_HMG_3	20	0	-	0	0	.
chr13	63846107	63846108	chr13:63846108:T:C	rs145184080	T	C	.	SOX2_HMG_3	36	0	-	0	0	.
chr13	63848805	63848806	chr13:63848806:G:C	rs536914	G	C	.	SOX2_HMG_3	-2	0	+	0	0	.
chr13	64244887	64244888	chr13:64244888:C:T	rs9317406	C	T	C	SOX2_HMG_3	-12	0	-	0	0	.
chr13	64317064	64317065	chr13:64317065:T:C	rs11148643	T	C	C	SOX2_HMG_3	8	1	-	5.923265461448256	6.772309408811886	AATCAATGACATTTTAA
chr13	64594791	64594792	chr13:64594792:A:G	rs12585691	A	G	A	SOX2_HMG_3	-5	0	+	0	0	.
chr13	64639368	64639369	chr13:64639369:T:G	rs359397	T	G	G	SOX2_HMG_3	25	0	+	0	0	.
chr13	64912516	64912517	chr13:64912517:C:T	rs1121006	C	T	c	SOX2_HMG_3	-2	0	+	0	0	.
chr13	64974567	64974568	chr13:64974568:G:A	rs9317464	G	A	g	SOX2_HMG_3	22	0	+	0	0	.
chr13	65959757	65959758	chr13:65959758:T:C	rs10492541	T	C	T	SOX2_HMG_3	6	1	+	3.8034761854816668	-3.105278593833554	TCTCAGTGGAATTGAGT
chr13	66118817	66118818	chr13:66118818:G:A	rs4132798	G	A	G	SOX2_HMG_3	27	0	-	0	0	.
chr13	66118839	66118840	chr13:66118840:T:C	rs10507729	T	C	T	SOX2_HMG_3	5	1	-	6.222562778768979	-0.6861920005462414	AATCAATATTCTTGTTA
chr13	66181447	66181448	chr13:66181448:G:A	rs11620281	G	A	G	SOX2_HMG_3	36	0	-	0	0	.
chr13	66181491	66181492	chr13:66181492:T:C	rs73499935	T	C	T	SOX2_HMG_3	-8	0	-	0	0	.
chr13	66181503	66181504	chr13:66181504:G:C	rs7335524	G	C	G	SOX2_HMG_3	-20	0	-	0	0	.
chr13	66412715	66412716	chr13:66412716:G:A	rs9540740	G	A	g	SOX2_HMG_3	13	1	+	3.337250651096311	-3.5715041282189093	TACCAATGCTAGTGTCC
chr13	66464259	66464260	chr13:66464260:C:T	rs1470370	C	T	C	SOX2_HMG_3	24	0	-	0	0	.
chr13	66624592	66624593	chr13:66624593:A:G	rs9529106	A	G	A	SOX2_HMG_3	5	1	+	5.166452877806864	-1.7423019015083552	TAACAATTTTATTGCTA
chr13	66673746	66673747	chr13:66673747:T:C	rs9317600	T	C	C	SOX2_HMG_3	19	0	-	0	0	.
chr13	67227399	67227400	chr13:67227400:A:G	rs45527937	A	G	A	SOX2_HMG_3	6	1	-	3.9139771057394586	-2.9947776735757627	CATCAATGTCACCGATG
chr13	67296832	67296833	chr13:67296833:G:T	rs115247536	G	T	G	SOX2_HMG_3	-8	0	+	0	0	.
chr13	67369983	67369984	chr13:67369984:C:T	rs17082433	C	T	C	SOX2_HMG_3	8	1	-	5.853847036097534	5.004803088733905	TAGTAATGGTAGTGATG
chr13	68012448	68012449	chr13:68012449:T:C	rs962412844	T	C	T	SOX2_HMG_3	4	1	-	2.9522687442729345	-3.956486035042286	CAGCAATGTGAGTGACT
chr13	68253940	68253941	chr13:68253941:G:A	rs1778812	G	A	G	SOX2_HMG_3	12	1	-	3.7909073469757737	10.699662126290994	GATCAATGCTAACGATT
chr13	68923233	68923234	chr13:68923234:G:A	rs9592579	G	A	g	SOX2_HMG_3	32	0	+	0	0	.
chr13	69424048	69424049	chr13:69424049:G:T	rs57212794	G	T	G	SOX2_HMG_3	27	0	+	0	0	.
chr13	69474536	69474537	chr13:69474537:G:A	rs963570229	G	A	G	SOX2_HMG_3	7	1	+	3.1466621721455463	0.4178750515842115	AGGCAATGCTAGGGATT
chr13	70041348	70041349	chr13:70041349:T:C	rs546222696	T	C	T	SOX2_HMG_3	5	1	-	4.115923989416395	-2.7928307898988267	AATCCATACTATTGTAA
chr13	70042905	70042906	chr13:70042906:G:C	rs79303832	G	C	G	SOX2_HMG_3	22	0	+	0	0	.
chr13	70090030	70090031	chr13:70090031:T:A	rs9572362	T	A	T	SOX2_HMG_3	9	1	+	15.706623483033834	13.848048141087103	AATCAATAGTATTGATA
chr13	70311098	70311099	chr13:70311099:T:A	rs11616647	T	A	T	SOX2_HMG_3	-2	0	+	0	0	.
chr13	70424916	70424917	chr13:70424917:A:G	rs9599663	A	G	A	SOX2_HMG_3	-7	0	-	0	0	.
chr13	70534744	70534745	chr13:70534745:A:G	rs9542369	A	G	G	SOX2_HMG_3	-1	0	+	0	0	.
chr13	70916767	70916768	chr13:70916768:T:C	rs2325352	T	C	T	SOX2_HMG_3	35	0	-	0	0	.
chr13	71052462	71052463	chr13:71052463:A:G	rs9572631	A	G	A	SOX2_HMG_3	-1	0	-	0	0	.
chr13	71210488	71210489	chr13:71210489:A:G	rs9572687	A	G	A	SOX2_HMG_3	5	1	+	4.017455198922169	-2.8912995803930515	TGTCAATTTCAGTGCAG
chr13	71789889	71789890	chr13:71789890:C:A	rs748676	C	A	C	SOX2_HMG_3	-18	0	+	0	0	.
chr13	72151574	72151575	chr13:72151575:T:G	rs585032	T	G	G	SOX2_HMG_3	-11	0	+	0	0	.
chr13	72352376	72352377	chr13:72352377:A:G	rs547638	A	G	a	SOX2_HMG_3	4	1	+	4.177414928871829	-2.7313398504433914	CTTCAATGCTGGTGAGA
chr13	72410574	72410575	chr13:72410575:G:A	rs17089337	G	A	G	SOX2_HMG_3	15	1	-	12.802104908208701	15.64481406438556	CATCAATGATAGTGACA
chr13	72653276	72653277	chr13:72653277:A:T	rs67827423	A	T	T	SOX2_HMG_3	-15	0	+	0	0	.
chr13	72686915	72686916	chr13:72686916:T:A	rs11838688	T	A	A	SOX2_HMG_3	32	0	+	0	0	.
chr13	72920449	72920450	chr13:72920450:A:G	rs9573064	A	G	A	SOX2_HMG_3	5	1	+	3.2866736508693966	-3.6220811284458247	GATCAATGGCACTAAAG
chr13	72920460	72920461	chr13:72920461:G:T	rs7327453	G	T	G	SOX2_HMG_3	16	1	+	3.2866736508693966	2.4836032090932068	GATCAATGGCACTAAAG
chr13	72969567	72969568	chr13:72969568:G:A	rs117981701	G	A	G	SOX2_HMG_3	30	0	-	0	0	.
chr13	73071161	73071162	chr13:73071162:C:T	rs9530145	C	T	C	SOX2_HMG_3	-3	0	+	0	0	.
chr13	73198683	73198684	chr13:73198684:G:A	rs61966315	G	A	G	SOX2_HMG_3	8	1	-	4.75740866858335	5.6291450212192125	GAGCAATGCAATTTATT
chr13	73366588	73366589	chr13:73366589:C:G	rs9318170	C	G	G	SOX2_HMG_3	3	1	+	5.088163951748977	-1.8205908275662421	GACCAGTGACATTGATA
chr13	73481095	73481096	chr13:73481096:C:T	rs1361058	C	T	T	SOX2_HMG_3	-7	0	-	0	0	.
chr13	73618669	73618670	chr13:73618670:A:G	rs138426676	A	G	A	SOX2_HMG_3	29	0	+	0	0	.
chr13	73708483	73708484	chr13:73708484:G:T	rs150823534	G	T	G	SOX2_HMG_3	13	1	+	3.925075696113012	-2.9836790832022086	TGTCAGTGTCATTGTTC
chr13	74112708	74112709	chr13:74112709:C:T	rs9565077	C	T	C	SOX2_HMG_3	27	0	-	0	0	.
chr13	74172044	74172045	chr13:74172045:T:C	rs7990716	T	C	T	SOX2_HMG_3	5	1	-	3.8092977716777607	-3.0994570076374615	GGTCAATGGTATAGTGC
chr13	74289201	74289202	chr13:74289202:C:A	rs9573368	C	A	C	SOX2_HMG_3	7	1	-	3.1300392201761618	1.0853287154426257	GACCAAAGGTAGTGAGT
chr13	74630034	74630035	chr13:74630035:G:A	rs1359690	G	A	G	SOX2_HMG_3	7	1	+	7.1327578160061424	4.403970695444809	AGGCAATGACATTGTAA
chr13	74811168	74811169	chr13:74811169:C:A	rs4307837	C	A	A	SOX2_HMG_3	-13	0	-	0	0	.
chr13	74907839	74907840	chr13:74907840:G:A	rs1258992620	G	A	G	SOX2_HMG_3	18	0	-	0	0	.
chr13	75124229	75124230	chr13:75124230:C:T	rs9573483	C	T	C	SOX2_HMG_3	21	0	+	0	0	.
chr13	75254234	75254235	chr13:75254235:T:A	rs9318328	T	A	T	SOX2_HMG_3	31	0	-	0	0	.
chr13	75425550	75425551	chr13:75425551:G:A	rs12876647	G	A	G	SOX2_HMG_3	-7	0	+	0	0	.
chr13	75495543	75495544	chr13:75495544:T:C	rs75697026	T	C	T	SOX2_HMG_3	-13	0	+	0	0	.
chr13	75684933	75684934	chr13:75684934:T:C	rs9530460	T	C	T	SOX2_HMG_3	-9	0	-	0	0	.
chr13	75780154	75780155	chr13:75780155:G:A	rs9573659	G	A	G	SOX2_HMG_3	-4	0	+	0	0	.
chr13	75903015	75903016	chr13:75903016:G:T	rs976354	G	T	T	SOX2_HMG_3	30	0	-	0	0	.
chr13	76034592	76034593	chr13:76034593:G:A	rs7990448	G	A	G	SOX2_HMG_3	25	0	-	0	0	.
chr13	76117482	76117483	chr13:76117483:C:T	rs1590910	C	T	C	SOX2_HMG_3	-16	0	-	0	0	.
chr13	76787580	76787581	chr13:76787581:C:T	rs76842352	C	T	C	SOX2_HMG_3	34	0	-	0	0	.
chr13	76787617	76787618	chr13:76787618:A:G	rs8000613	A	G	G	SOX2_HMG_3	-3	0	-	0	0	.
chr13	77330025	77330026	chr13:77330026:G:A	rs115736965	G	A	G	SOX2_HMG_3	-14	0	-	0	0	.
chr13	78131970	78131971	chr13:78131971:A:G	rs146370781	A	G	A	SOX2_HMG_3	-6	0	-	0	0	.
chr13	78146047	78146048	chr13:78146048:T:C	rs1408612	T	C	T	SOX2_HMG_3	27	0	+	0	0	.
chr13	78240584	78240585	chr13:78240585:C:T	rs9565397	C	T	C	SOX2_HMG_3	-18	0	-	0	0	.
chr13	78535209	78535210	chr13:78535210:G:A	rs9601075	G	A	G	SOX2_HMG_3	0	1	+	4.091895627112981	3.8713013480276874	GACCAATGGTTGTGAAA
chr13	78849152	78849153	chr13:78849153:C:T	rs7986745	C	T	C	SOX2_HMG_3	-13	0	-	0	0	.
chr13	79424076	79424077	chr13:79424077:G:T	rs961968515	G	T	G	SOX2_HMG_3	-15	0	-	0	0	.
chr13	79851156	79851157	chr13:79851157:G:C	rs7337191	G	C	C	SOX2_HMG_3	13	1	+	9.80416211629888	2.895407336983659	CCTCAATGGAATTGTTT
chr13	80049210	80049211	chr13:80049211:A:C	rs7981942	A	C	A	SOX2_HMG_3	-1	0	+	0	0	.
chr13	80191680	80191681	chr13:80191681:G:C	rs518627	G	C	G	SOX2_HMG_3	-8	0	+	0	0	.
chr13	80563220	80563221	chr13:80563221:G:T	rs1539716	G	T	G	SOX2_HMG_3	15	1	+	4.5442451656424865	6.211621183910109	AAACAATGTAGTTGAGG
chr13	80592100	80592101	chr13:80592101:T:C	rs1936551	T	C	T	SOX2_HMG_3	-10	0	+	0	0	.
chr13	80634935	80634936	chr13:80634936:C:A	rs1176288	C	A	A	SOX2_HMG_3	2	1	+	4.221728592026104	5.357485827663651	GTCCAATTGTATTGTGA
chr13	80755681	80755682	chr13:80755682:C:T	rs2794249	C	T	C	SOX2_HMG_3	33	0	-	0	0	.
chr13	81397512	81397513	chr13:81397513:A:G	rs9318766	A	G	G	SOX2_HMG_3	22	0	+	0	0	.
chr13	81507014	81507015	chr13:81507015:A:C	rs12583741	A	C	A	SOX2_HMG_3	-20	0	+	0	0	.
chr13	81771146	81771147	chr13:81771147:A:G	rs73246713	A	G	A	SOX2_HMG_3	10	1	+	5.212250208865975	-1.696504570449245	ACTCATTTCTATTGATT
chr13	81783888	81783889	chr13:81783889:C:A	rs446371	C	A	C	SOX2_HMG_3	23	0	-	0	0	.
chr13	82076569	82076570	chr13:82076570:A:G	rs9531289	A	G	A	SOX2_HMG_3	-12	0	+	0	0	.
chr13	83200330	83200331	chr13:83200331:T:C	rs2669246	T	C	C	SOX2_HMG_3	4	1	-	8.148015234560125	1.2392604552449045	GCTCAATGGTAGTGTCT
chr13	83397295	83397296	chr13:83397296:A:C	rs9546370	A	C	C	SOX2_HMG_3	19	0	-	0	0	.
chr13	83839352	83839353	chr13:83839353:T:A	rs77893454	T	A	T	SOX2_HMG_3	18	0	-	0	0	.
chr13	83927585	83927586	chr13:83927586:G:A	rs7338518	G	A	A	SOX2_HMG_3	-19	0	-	0	0	.
chr13	84130135	84130136	chr13:84130136:T:C	rs7989783	T	C	C	SOX2_HMG_3	-4	0	+	0	0	.
chr13	84130150	84130151	chr13:84130151:G:A	rs4378519	G	A	g	SOX2_HMG_3	11	1	+	3.4383014242714003	-1.8373101047409977	TTTCATTGGCAGTGAGT
chr13	84137216	84137217	chr13:84137217:A:G	rs9546612	A	G	A	SOX2_HMG_3	-17	0	+	0	0	.
chr13	84492167	84492168	chr13:84492168:G:A	rs9575590	G	A	G	SOX2_HMG_3	29	0	-	0	0	.
chr13	84553169	84553170	chr13:84553170:A:C	rs11618006	A	C	A	SOX2_HMG_3	24	0	-	0	0	.
chr13	85332549	85332550	chr13:85332550:A:G	rs9319141	A	G	A	SOX2_HMG_3	33	0	+	0	0	.
chr13	85373411	85373412	chr13:85373412:A:G	rs7332804	A	G	A	SOX2_HMG_3	-18	0	-	0	0	.
chr13	85379949	85379950	chr13:85379950:A:G	rs7990259	A	G	A	SOX2_HMG_3	9	1	+	11.811555291598369	7.230780262444999	TTTCAATGTAATTGAAA
chr13	86014372	86014373	chr13:86014373:G:A	rs7333127	G	A	A	SOX2_HMG_3	1	1	+	6.78911222012151	8.6207598102008	AGTCAATATAAGTGTAA
chr13	86088199	86088200	chr13:86088200:T:C	rs74102186	T	C	T	SOX2_HMG_3	28	0	+	0	0	.
chr13	87379365	87379366	chr13:87379366:A:G	rs9584585	A	G	A	SOX2_HMG_3	10	1	+	5.831746896667758	-1.077007882647463	GATCCATGACAGTGACA
chr13	87390653	87390654	chr13:87390654:C:A	rs72639317	C	A	C	SOX2_HMG_3	-13	0	+	0	0	.
chr13	88042567	88042568	chr13:88042568:C:T	rs1413275	C	T	C	SOX2_HMG_3	30	0	+	0	0	.
chr13	88337649	88337650	chr13:88337650:C:T	rs9520282	C	T	-	SOX2_HMG_3	-18	0	+	0	0	.
chr13	89206316	89206317	chr13:89206317:G:C	rs393546	G	C	C	SOX2_HMG_3	13	1	+	3.777942158559646	-3.130812620755574	GCTCAATGTAATAGTTT
chr13	90146016	90146017	chr13:90146017:A:G	rs1813389	A	G	g	SOX2_HMG_3	10	1	+	3.387590549691287	-3.5211642296239343	GATCAACCTTATTGAAT
chr13	90281790	90281791	chr13:90281791:A:G	rs12866611	A	G	A	SOX2_HMG_3	34	0	+	0	0	.
chr13	90282029	90282030	chr13:90282030:G:A	rs9522905	G	A	G	SOX2_HMG_3	20	0	+	0	0	.
chr13	90847729	90847730	chr13:90847730:A:G	rs9589026	A	G	A	SOX2_HMG_3	-1	0	+	0	0	.
chr13	90927073	90927074	chr13:90927074:A:T	rs9583853	A	T	A	SOX2_HMG_3	10	1	+	4.875334859373104	-2.0334199199421166	CGTCAATTTAATAGATT
chr13	91631077	91631078	chr13:91631078:A:G	rs10492614	A	G	A	SOX2_HMG_3	2	1	-	6.8662803108681585	1.862908240552572	AATGAATTTCAGTGATT
chr13	92413634	92413635	chr13:92413635:T:G	rs4773681	T	G	G	SOX2_HMG_3	12	1	+	9.095267697428568	2.1865129181133476	GATCAAGGGTAGTGAAA
chr13	93118621	93118622	chr13:93118622:G:A	rs9523926	G	A	G	SOX2_HMG_3	21	0	+	0	0	.
chr13	94146061	94146062	chr13:94146062:G:A	rs495705	G	A	A	SOX2_HMG_3	-10	0	-	0	0	.
chr13	94154698	94154699	chr13:94154699:A:T	rs685049	A	T	T	SOX2_HMG_3	-10	0	+	0	0	.
chr13	94305354	94305355	chr13:94305355:C:T	rs72647623	C	T	C	SOX2_HMG_3	7	1	-	7.330452189686819	4.601665069125485	GTTCAATGTTAATGAAT
chr13	94584091	94584092	chr13:94584092:A:G	rs61965578	A	G	A	SOX2_HMG_3	5	1	-	3.242069858304295	3.242069858304295	CATCATTGTCAGTGTAC
chr13	94608166	94608167	chr13:94608167:T:C	rs9524556	T	C	C	SOX2_HMG_3	-10	0	+	0	0	.
chr13	94978602	94978603	chr13:94978603:A:T	rs9590150	A	T	A	SOX2_HMG_3	23	0	+	0	0	.
chr13	96223544	96223545	chr13:96223545:C:G	rs16951722	C	G	C	SOX2_HMG_3	11	1	-	5.92064341120836	0.645031882195962	TGTCAATGCTAGGGAAG
chr13	96256173	96256174	chr13:96256174:G:A	rs9525172	G	A	G	SOX2_HMG_3	33	0	-	0	0	.
chr13	96385334	96385335	chr13:96385335:A:G	rs9516673	A	G	A	SOX2_HMG_3	26	0	-	0	0	.
chr13	96460667	96460668	chr13:96460668:C:T	rs1887602	C	T	T	SOX2_HMG_3	30	0	+	0	0	.
chr13	96747337	96747338	chr13:96747338:T:A	rs57261742	T	A	T	SOX2_HMG_3	29	0	+	0	0	.
chr13	96796073	96796074	chr13:96796074:A:G	rs58700940	A	G	A	SOX2_HMG_3	-16	0	-	0	0	.
chr13	97224583	97224584	chr13:97224584:C:T	rs55927664	C	T	C	SOX2_HMG_3	-12	0	-	0	0	.
chr13	97277425	97277426	chr13:97277426:C:T	rs2389823	C	T	C	SOX2_HMG_3	10	1	+	7.287876634657193	7.287876634657193	TATCAATGCTCTTGACA
chr13	97344770	97344771	chr13:97344771:T:C	rs762237379	T	C	T	SOX2_HMG_3	-14	0	+	0	0	.
chr13	97344773	97344774	chr13:97344774:A:G	rs184960826	A	G	A	SOX2_HMG_3	-11	0	+	0	0	.
chr13	97505193	97505194	chr13:97505194:T:C	rs186442766	T	C	T	SOX2_HMG_3	-16	0	+	0	0	.
chr13	97928611	97928612	chr13:97928612:T:C	rs9517133	T	C	T	SOX2_HMG_3	19	0	-	0	0	.
chr13	98238801	98238802	chr13:98238802:G:T	rs2892898	G	T	T	SOX2_HMG_3	-2	0	-	0	0	.
chr13	98326580	98326581	chr13:98326581:T:C	rs10492708	T	C	T	SOX2_HMG_3	5	1	-	4.538117344025444	-2.3706374352897748	TCCCAATTGTAGTGAAT
chr13	98399258	98399259	chr13:98399259:T:C	rs4772071	T	C	C	SOX2_HMG_3	12	1	-	3.285413100732384	3.285413100732384	GGCCAATGTTATAGAAT
chr13	98411989	98411990	chr13:98411990:T:C	rs11556829	T	C	T	SOX2_HMG_3	28	0	-	0	0	.
chr13	98412909	98412910	chr13:98412910:G:A	rs7323690	G	A	A	SOX2_HMG_3	30	0	-	0	0	.
chr13	98525136	98525137	chr13:98525137:G:A	rs9300485	G	A	G	SOX2_HMG_3	15	1	+	1.8993373574620014	2.331810939012902	AATCAATGCCAAAGAGG
chr13	98673800	98673801	chr13:98673801:T:C	rs1782675	T	C	G	SOX2_HMG_3	33	0	-	0	0	.
chr13	98948129	98948130	chr13:98948130:C:T	rs964291888	C	T	C	SOX2_HMG_3	4	1	+	5.243145362403686	5.243145362403686	TCTCCATGTCAGTGATT
chr13	98973131	98973132	chr13:98973132:A:G	rs1408718	A	G	A	SOX2_HMG_3	7	1	+	6.20298038745023	8.931767508011564	ATTAAATATTATTGATG
chr13	98996163	98996164	chr13:98996164:T:C	rs912688	T	C	C	SOX2_HMG_3	-17	0	+	0	0	.
chr13	99198698	99198699	chr13:99198699:G:A	rs1042902686	G	A	G	SOX2_HMG_3	8	1	+	4.253453503518066	3.4044095561544365	GGTTAATTGCAGTGAGG
chr13	99381634	99381635	chr13:99381635:G:A	rs7317555	G	A	G	SOX2_HMG_3	-11	0	-	0	0	.
chr13	99411160	99411161	chr13:99411161:A:G	rs61972469	A	G	A	SOX2_HMG_3	6	1	-	3.3983322394282687	-3.5104225398869517	CAACAATGCAGGTGATG
chr13	99648687	99648688	chr13:99648688:C:T	rs2153672	C	T	C	SOX2_HMG_3	13	1	-	3.8427434152013222	-3.066011364113898	AATCAAAGCAAGTGTAG
chr13	99807062	99807063	chr13:99807063:G:A	rs9557311	G	A	G	SOX2_HMG_3	-16	0	+	0	0	.
chr13	100063426	100063427	chr13:100063427:T:C	rs116419387	T	C	T	SOX2_HMG_3	0	1	-	4.1520682926515216	4.372662571736815	AGCCAATTCAAGTGAGG
chr13	100153542	100153543	chr13:100153543:G:A	rs2390401	G	A	A	SOX2_HMG_3	36	0	-	0	0	.
chr13	100705153	100705154	chr13:100705154:A:G	chr13:100705154:A:G	A	G	A	SOX2_HMG_3	17	0	+	0	0	.
chr13	100805291	100805292	chr13:100805292:A:G	rs4771375	A	G	G	SOX2_HMG_3	22	0	-	0	0	.
chr13	100808047	100808048	chr13:100808048:C:T	rs1570602	C	T	C	SOX2_HMG_3	-2	0	-	0	0	.
chr13	100981969	100981970	chr13:100981970:G:C	rs76941131	G	C	G	SOX2_HMG_3	31	0	+	0	0	.
chr13	101154211	101154212	chr13:101154212:T:C	rs79787161	T	C	T	SOX2_HMG_3	31	0	+	0	0	.
chr13	101329419	101329420	chr13:101329420:T:C	rs506746	T	C	C	SOX2_HMG_3	-19	0	-	0	0	.
chr13	101649647	101649648	chr13:101649648:A:T	rs1036437	A	T	A	SOX2_HMG_3	25	0	-	0	0	.
chr13	101949782	101949783	chr13:101949783:T:G	rs727424	T	G	T	SOX2_HMG_3	8	1	-	2.844573103938867	2.959348618531295	AATGAATGAGATTGAGG
chr13	102036181	102036182	chr13:102036182:A:G	rs76726420	A	G	A	SOX2_HMG_3	-9	0	+	0	0	.
chr13	102199163	102199164	chr13:102199164:G:A	rs566197064	G	A	G	SOX2_HMG_3	-14	0	-	0	0	.
chr13	102550795	102550796	chr13:102550796:T:C	rs7983718	T	C	T	SOX2_HMG_3	31	0	-	0	0	.
chr13	102819427	102819428	chr13:102819428:G:A	rs9554899	G	A	A	SOX2_HMG_3	-1	0	-	0	0	.
chr13	104065489	104065490	chr13:104065490:T:C	rs2806757	T	C	C	SOX2_HMG_3	10	1	-	4.50458395859363	-2.4041708207215904	CATCCATGTTATCGATG
chr13	104132979	104132980	chr13:104132980:G:A	rs7332734	G	A	G	SOX2_HMG_3	-4	0	-	0	0	.
chr13	104357985	104357986	chr13:104357986:A:G	rs7330591	A	G	T	SOX2_HMG_3	6	1	-	8.151835397756775	1.2430806184415544	TGTCAATGTTAATGAAA
chr13	104593044	104593045	chr13:104593045:C:T	rs9519399	C	T	C	SOX2_HMG_3	29	0	-	0	0	.
chr13	104954355	104954356	chr13:104954356:A:G	rs115043767	A	G	a	SOX2_HMG_3	5	1	+	10.524883207179906	3.616128427864683	TCTCAATGTTATTGTGA
chr13	105034832	105034833	chr13:105034833:C:T	rs74562607	C	T	C	SOX2_HMG_3	-4	0	+	0	0	.
chr13	105281349	105281350	chr13:105281350:T:C	rs7324140	T	C	T	SOX2_HMG_3	27	0	+	0	0	.
chr13	105471769	105471770	chr13:105471770:A:G	rs548977399	A	G	A	SOX2_HMG_3	-15	0	+	0	0	.
chr13	105524203	105524204	chr13:105524204:C:T	rs1362886	C	T	C	SOX2_HMG_3	27	0	-	0	0	.
chr13	105547958	105547959	chr13:105547959:A:G	rs9586886	A	G	G	SOX2_HMG_3	-10	0	-	0	0	.
chr13	105848049	105848050	chr13:105848050:T:C	rs74113317	T	C	T	SOX2_HMG_3	20	0	-	0	0	.
chr13	105915555	105915556	chr13:105915556:C:T	rs35887690	C	T	C	SOX2_HMG_3	0	1	-	5.673027669128425	5.45243339004313	GGTCAGTGATATTGAGC
chr13	105924979	105924980	chr13:105924980:G:A	rs12877779	G	A	G	SOX2_HMG_3	26	0	-	0	0	.
chr13	105941042	105941043	chr13:105941043:T:C	rs17514375	T	C	C	SOX2_HMG_3	10	1	-	3.396754121602338	-3.5120006577128815	GCTCAACATCAGTGATT
chr13	106145366	106145367	chr13:106145367:C:T	rs12868856	C	T	C	SOX2_HMG_3	25	0	+	0	0	.
chr13	106587935	106587936	chr13:106587936:C:A	rs2391345	C	A	C	SOX2_HMG_3	0	1	+	11.403867775145521	11.928340397771551	CCTCAATGATAGTGAAA
chr13	107271497	107271498	chr13:107271498:C:G	rs75312685	C	G	C	SOX2_HMG_3	-7	0	-	0	0	.
chr13	107586074	107586075	chr13:107586075:T:A	rs2391460	T	A	A	SOX2_HMG_3	21	0	+	0	0	.
chr13	107625249	107625250	chr13:107625250:G:A	rs1924430	G	A	A	SOX2_HMG_3	-16	0	+	0	0	.
chr13	107650134	107650135	chr13:107650135:G:A	rs4772898	G	A	G	SOX2_HMG_3	23	0	-	0	0	.
chr13	107650164	107650165	chr13:107650165:T:C	rs4771574	T	C	T	SOX2_HMG_3	-7	0	-	0	0	.
chr13	107941229	107941230	chr13:107941230:C:T	rs816986	C	T	T	SOX2_HMG_3	-7	0	-	0	0	.
chr13	108166328	108166329	chr13:108166329:A:G	rs7337941	A	G	A	SOX2_HMG_3	1	1	+	3.457199187065202	1.6255515969859113	TATCAATGATCTTGCTG
chr13	108383954	108383955	chr13:108383955:T:C	rs7993859	T	C	T	SOX2_HMG_3	-1	0	-	0	0	.
chr13	108598132	108598133	chr13:108598133:G:A	rs9587626	G	A	G	SOX2_HMG_3	13	1	+	4.219406954697277	-2.6893478246179434	GATCAATATCAGCGTTA
chr13	108777760	108777761	chr13:108777761:T:A	rs144828559	T	A	T	SOX2_HMG_3	30	0	+	0	0	.
chr13	109682809	109682810	chr13:109682810:T:C	rs9521473	T	C	C	SOX2_HMG_3	8	1	-	5.080528834556846	5.929572781920475	GAGCATTGACAGTGATG
chr13	109773600	109773601	chr13:109773601:T:C	rs56920445	T	C	C	SOX2_HMG_3	-13	0	-	0	0	.
chr13	109909866	109909867	chr13:109909867:A:G	rs9634474	A	G	G	SOX2_HMG_3	2	1	-	3.1384810729499466	-1.8648909973656393	AATCAATGCTTATGAAG
chr13	110128739	110128740	chr13:110128740:A:G	rs7320138	A	G	A	SOX2_HMG_3	-7	0	-	0	0	.
chr13	110176002	110176003	chr13:110176003:C:T	rs2005447	C	T	C	SOX2_HMG_3	-8	0	-	0	0	.
chr13	110246522	110246523	chr13:110246523:T:C	rs614282	T	C	T	SOX2_HMG_3	5	1	-	5.819796758261275	-1.0889580210539458	CACCAATGAAATTGTGA
chr13	110247618	110247619	chr13:110247619:A:G	rs76254194	A	G	A	SOX2_HMG_3	14	1	+	2.7862534548854345	-1.3956241624156847	AGTCAATGGTTTTAATA
chr13	110304670	110304671	chr13:110304671:A:G	rs72655741	A	G	A	SOX2_HMG_3	5	1	+	3.382998608248003	-3.5257561710672176	AATCAATGGTTTAGAAA
chr13	110315050	110315051	chr13:110315051:A:C	chr13:110315051:A:C	A	C	A	SOX2_HMG_3	14	1	-	4.260954257366342	2.7918504848795163	TATCAATGGCAGGGTGA
chr13	110473585	110473586	chr13:110473586:T:A	rs9521796	T	A	T	SOX2_HMG_3	36	0	+	0	0	.
chr13	110577009	110577010	chr13:110577010:T:C	rs7985063	T	C	t	SOX2_HMG_3	11	1	+	6.809997042238276	0.11730554400592919	AAGCATTGATATTGATA
chr13	110637350	110637351	chr13:110637351:A:G	rs3825467	A	G	A	SOX2_HMG_3	5	1	-	3.4127673973493793	3.4127673973493793	GTTCATTGTCAGTGTTT
chr13	110645534	110645535	chr13:110645535:C:T	rs116919485	C	T	C	SOX2_HMG_3	-3	0	-	0	0	.
chr13	110662556	110662557	chr13:110662557:C:T	rs1853861	C	T	T	SOX2_HMG_3	3	1	+	7.610730603911932	0.7019758245967115	TACCAATTTAATTGAGG
chr13	110709822	110709823	chr13:110709823:A:G	rs9521909	A	G	G	SOX2_HMG_3	5	1	+	7.020217356223187	0.11146257690796535	GATCCATTTAATTGAAG
chr13	110759933	110759934	chr13:110759934:G:A	rs183500279	G	A	C	SOX2_HMG_3	-4	0	+	0	0	.
chr13	110811224	110811225	chr13:110811225:A:G	rs61970050	A	G	A	SOX2_HMG_3	-20	0	-	0	0	.
chr13	111127038	111127039	chr13:111127039:A:G	rs73633230	A	G	A	SOX2_HMG_3	-18	0	-	0	0	.
chr13	111216707	111216708	chr13:111216708:A:G	rs7995910	A	G	G	SOX2_HMG_3	1	1	+	1.7151336327922957	-0.11651395728699532	CATCAGTGGTAGGGAAG
chr13	111228730	111228731	chr13:111228731:A:C	rs115289909	A	C	A	SOX2_HMG_3	12	1	-	2.699193362440487	-4.209561416874733	AGTCAATGTCTGTGTGT
chr13	111561765	111561766	chr13:111561766:G:A	rs7321593	G	A	G	SOX2_HMG_3	-17	0	-	0	0	.
chr13	111636391	111636392	chr13:111636392:T:G	rs7338987	T	G	G	SOX2_HMG_3	-4	0	+	0	0	.
chr13	111952595	111952596	chr13:111952596:A:G	rs735223	A	G	G	SOX2_HMG_3	30	0	-	0	0	.
chr13	111958705	111958706	chr13:111958706:G:T	rs6577020	G	T	G	SOX2_HMG_3	8	1	+	2.6732328803494854	2.810700800214148	GCACAATGGCATAGAGG
chr13	112012049	112012050	chr13:112012050:T:C	rs1277778	T	C	G	SOX2_HMG_3	23	0	-	0	0	.
chr13	112435650	112435651	chr13:112435651:C:T	rs9549520	C	T	T	SOX2_HMG_3	24	0	+	0	0	.
chr13	112695504	112695505	chr13:112695505:A:G	rs282584	A	G	A	SOX2_HMG_3	-19	0	-	0	0	.
chr13	112764876	112764877	chr13:112764877:T:C	rs422046	T	C	C	SOX2_HMG_3	28	0	+	0	0	.
chr13	112835504	112835505	chr13:112835505:G:A	rs9549568	G	A	g	SOX2_HMG_3	6	1	-	3.5756304023200647	10.484385181635284	CCTCAACGGCAGTGAGT
chr13	112946608	112946609	chr13:112946609:T:C	rs12864060	T	C	T	SOX2_HMG_3	5	1	-	4.609638506423879	-2.299116272891343	AAACAATGACCTTGAGG
chr13	113074776	113074777	chr13:113074777:G:T	rs35463691	G	T	G	SOX2_HMG_3	-12	0	+	0	0	.
chr13	113152095	113152096	chr13:113152096:G:A	rs906279867	G	A	G	SOX2_HMG_3	24	0	-	0	0	.
chr13	113277538	113277539	chr13:113277539:G:A	rs74115822	G	A	G	SOX2_HMG_3	-12	0	+	0	0	.
chr13	113561301	113561302	chr13:113561302:G:C	rs9604156	G	C	g	SOX2_HMG_3	-13	0	-	0	0	.
chr13	113586456	113586457	chr13:113586457:C:G	rs79658657	C	G	C	SOX2_HMG_3	-10	0	+	0	0	.
chr13	114219407	114219408	chr13:114219408:A:G	rs7998976	A	G	A	SOX2_HMG_3	-14	0	-	0	0	.
chr13	114226674	114226675	chr13:114226675:T:C	rs9562165	T	C	C	SOX2_HMG_3	5	1	-	3.4145687376571723	-3.494186041658049	GGTCAATGCAATTTGTG
chr13	114310239	114310240	chr13:114310240:A:G	rs9525326	A	G	G	SOX2_HMG_3	12	1	-	4.232214984661226	-2.6765397946539946	AATCAATGCTAGTTGAG
chr14	16097982	16097983	chr14:16097983:A:C	rs1212023664	A	C	.	SOX2_HMG_3	-9	0	-	0	0	.
chr14	16098649	16098650	chr14:16098650:C:T	rs1051258091	C	T	.	SOX2_HMG_3	32	0	-	0	0	.
chr14	16098685	16098686	chr14:16098686:A:G	rs1033182279	A	G	.	SOX2_HMG_3	6	1	-	4.0361803855525356	-2.8725743937626844	AAGGAATGGAATTGAAT
chr14	16098706	16098707	chr14:16098707:C:T	rs921120653	C	T	.	SOX2_HMG_3	-15	0	-	0	0	.
chr14	16098857	16098858	chr14:16098858:C:G	rs912402354	C	G	.	SOX2_HMG_3	-16	0	-	0	0	.
chr14	16103919	16103920	chr14:16103920:A:G	chr14:16103920:A:G	A	G	.	SOX2_HMG_3	6	1	-	4.0361803855525356	-2.8725743937626844	AAGGAATGGAATTGAAT
chr14	20031893	20031894	chr14:20031894:G:A	rs55892135	G	A	g	SOX2_HMG_3	25	0	+	0	0	.
chr14	20456274	20456275	chr14:20456275:T:C	rs3136817	T	C	T	SOX2_HMG_3	9	1	-	7.837476446670012	3.2567014175166427	TGGCAATGGAAGTGAAG
chr14	20590265	20590266	chr14:20590266:G:T	rs3827902	G	T	G	SOX2_HMG_3	-20	0	-	0	0	.
chr14	20601161	20601162	chr14:20601162:G:A	rs1272513	G	A	G	SOX2_HMG_3	8	1	+	2.1956466020312613	1.3466026546676337	AGTCAATGGCAATCATA
chr14	20624443	20624444	chr14:20624444:A:G	rs1243675	A	G	G	SOX2_HMG_3	26	0	+	0	0	.
chr14	20987932	20987933	chr14:20987933:C:A	rs2741729	C	A	C	SOX2_HMG_3	9	1	-	5.284178526023133	11.72352889712323	CCTCAATGGGAGTGAAT
chr14	21585550	21585551	chr14:21585551:A:C	rs6571922	A	C	c	SOX2_HMG_3	18	0	+	0	0	.
chr14	21795648	21795649	chr14:21795649:C:T	rs12434548	C	T	c	SOX2_HMG_3	-20	0	-	0	0	.
chr14	21847113	21847114	chr14:21847114:C:T	rs2075489	C	T	c	SOX2_HMG_3	0	1	+	2.699740020461344	2.5624110424126796	CATCAACGGTTTTGAGG
chr14	21894903	21894904	chr14:21894904:C:G	rs12890675	C	G	G	SOX2_HMG_3	-19	0	+	0	0	.
chr14	21925175	21925176	chr14:21925176:G:A	rs35954874	G	A	G	SOX2_HMG_3	-17	0	-	0	0	.
chr14	21978246	21978247	chr14:21978247:T:A	rs74035449	T	A	T	SOX2_HMG_3	-17	0	-	0	0	.
chr14	21979007	21979008	chr14:21979008:G:A	rs2075484	G	A	A	SOX2_HMG_3	-5	0	+	0	0	.
chr14	21979010	21979011	chr14:21979011:A:G	rs2075485	A	G	G	SOX2_HMG_3	-2	0	+	0	0	.
chr14	22065998	22065999	chr14:22065999:G:A	rs3811309	G	A	G	SOX2_HMG_3	-4	0	+	0	0	.
chr14	22125035	22125036	chr14:22125036:A:C	rs12431484	A	C	C	SOX2_HMG_3	30	0	-	0	0	.
chr14	22227030	22227031	chr14:22227031:C:T	rs2075496	C	T	T	SOX2_HMG_3	-6	0	+	0	0	.
chr14	22495896	22495897	chr14:22495897:A:C	rs226986	A	C	A	SOX2_HMG_3	30	0	-	0	0	.
chr14	22566123	22566124	chr14:22566124:C:A	rs5742865	C	A	A	SOX2_HMG_3	5	1	-	3.3469676672176556	3.3469676672176556	TACCAGTGTTAGTGAAA
chr14	22569710	22569711	chr14:22569711:G:A	rs5742838	G	A	G	SOX2_HMG_3	33	0	+	0	0	.
chr14	23062983	23062984	chr14:23062984:T:C	rs114105349	T	C	T	SOX2_HMG_3	-19	0	+	0	0	.
chr14	23195973	23195974	chr14:23195974:C:T	rs113181269	C	T	C	SOX2_HMG_3	-13	0	-	0	0	.
chr14	23775489	23775490	chr14:23775490:A:G	rs976222	A	G	A	SOX2_HMG_3	-9	0	+	0	0	.
chr14	23775496	23775497	chr14:23775497:A:C	rs976221	A	C	C	SOX2_HMG_3	-2	0	+	0	0	.
chr14	23829804	23829805	chr14:23829805:G:T	rs12898165	G	T	T	SOX2_HMG_3	-5	0	+	0	0	.
chr14	23912243	23912244	chr14:23912244:G:C	rs8010302	G	C	C	SOX2_HMG_3	35	0	-	0	0	.
chr14	23987766	23987767	chr14:23987767:G:A	rs56171184	G	A	G	SOX2_HMG_3	-15	0	-	0	0	.
chr14	24245289	24245290	chr14:24245290:T:G	rs144643902	T	G	T	SOX2_HMG_3	-18	0	-	0	0	.
chr14	24340643	24340644	chr14:24340644:C:A	rs3212246	C	A	A	SOX2_HMG_3	-7	0	+	0	0	.
chr14	24536124	24536125	chr14:24536125:G:T	rs987630	G	T	T	SOX2_HMG_3	-14	0	+	0	0	.
chr14	24725363	24725364	chr14:24725364:T:C	rs206226	T	C	C	SOX2_HMG_3	18	0	+	0	0	.
chr14	24833626	24833627	chr14:24833627:T:C	rs79868489	T	C	T	SOX2_HMG_3	-6	0	-	0	0	.
chr14	25042473	25042474	chr14:25042474:G:A	rs11626436	G	A	A	SOX2_HMG_3	8	1	-	3.438073783367593	4.309810136003456	GCTAAATGCTATTGACC
chr14	25094402	25094403	chr14:25094403:C:A	rs17185698	C	A	A	SOX2_HMG_3	-15	0	-	0	0	.
chr14	26422702	26422703	chr14:26422703:G:A	rs61988519	G	A	A	SOX2_HMG_3	3	1	-	6.699633680188156	-0.20912109912706556	GTTCAAGGGCATTGAAA
chr14	26523513	26523514	chr14:26523514:C:T	rs73601914	C	T	T	SOX2_HMG_3	24	0	-	0	0	.
chr14	26594860	26594861	chr14:26594861:A:C	rs1950409	A	C	A	SOX2_HMG_3	-10	0	+	0	0	.
chr14	26595699	26595700	chr14:26595700:A:G	rs17111434	A	G	A	SOX2_HMG_3	-3	0	+	0	0	.
chr14	26802117	26802118	chr14:26802118:G:A	rs3950060	G	A	G	SOX2_HMG_3	-10	0	-	0	0	.
chr14	26841956	26841957	chr14:26841957:C:G	rs1956818	C	G	C	SOX2_HMG_3	13	1	-	5.707740382437424	-1.201014396877796	GAGCAATGGAAATGATT
chr14	26967147	26967148	chr14:26967148:G:C	rs548866406	G	C	G	SOX2_HMG_3	-19	0	+	0	0	.
chr14	26967169	26967170	chr14:26967170:C:G	chr14:26967170:C:G	C	G	C	SOX2_HMG_3	3	1	+	4.911912997292198	-1.9968417820230242	AGTCAATGCCATTCTTT
chr14	27784278	27784279	chr14:27784279:A:T	rs61974426	A	T	a	SOX2_HMG_3	10	1	+	2.688008139440133	-4.220746639875087	TGACAATGTGAGTGAGA
chr14	28129745	28129746	chr14:28129746:C:G	rs1191379	C	G	G	SOX2_HMG_3	23	0	+	0	0	.
chr14	28614820	28614821	chr14:28614821:A:G	rs12891361	A	G	A	SOX2_HMG_3	16	1	+	5.863994918256929	6.137682534647201	CATCAGTTGAATTGAAA
chr14	28693625	28693626	chr14:28693626:A:G	rs176264	A	G	A	SOX2_HMG_3	12	1	-	7.365690908604657	0.45693612928943717	GTTCAATAGTATTGTCA
chr14	28783552	28783553	chr14:28783553:A:G	rs952829086	A	G	A	SOX2_HMG_3	-4	0	-	0	0	.
chr14	29030484	29030485	chr14:29030485:C:G	rs17114423	C	G	C	SOX2_HMG_3	-2	0	-	0	0	.
chr14	29384482	29384483	chr14:29384483:T:C	rs1962751	T	C	T	SOX2_HMG_3	-9	0	+	0	0	.
chr14	29529627	29529628	chr14:29529628:G:T	rs1191554	G	T	G	SOX2_HMG_3	-2	0	+	0	0	.
chr14	30109559	30109560	chr14:30109560:C:T	rs1837683	C	T	C	SOX2_HMG_3	18	0	-	0	0	.
chr14	30109592	30109593	chr14:30109593:T:C	rs225864	T	C	T	SOX2_HMG_3	-15	0	-	0	0	.
chr14	30125946	30125947	chr14:30125947:A:G	rs8005700	A	G	A	SOX2_HMG_3	6	1	-	5.107077022549509	-1.8016777567657098	ATTCAATTGAAATGATG
chr14	30775283	30775284	chr14:30775284:G:A	rs7160558	G	A	A	SOX2_HMG_3	-7	0	-	0	0	.
chr14	30797685	30797686	chr14:30797686:A:G	rs2518665	A	G	G	SOX2_HMG_3	36	0	-	0	0	.
chr14	31194290	31194291	chr14:31194291:G:C	rs141161645	G	C	G	SOX2_HMG_3	-17	0	+	0	0	.
chr14	31194309	31194310	chr14:31194310:T:C	rs145323103	T	C	T	SOX2_HMG_3	2	1	+	6.548540728169197	1.5451686578536081	TTTCAATTATAGTGGTG
chr14	31199852	31199853	chr14:31199853:T:C	rs61995486	T	C	t	SOX2_HMG_3	27	0	-	0	0	.
chr14	31264308	31264309	chr14:31264309:T:G	rs116495789	T	G	T	SOX2_HMG_3	-14	0	+	0	0	.
chr14	31458318	31458319	chr14:31458319:G:A	rs145449343	G	A	G	SOX2_HMG_3	-14	0	+	0	0	.
chr14	31696256	31696257	chr14:31696257:G:C	rs12878072	G	C	G	SOX2_HMG_3	-12	0	-	0	0	.
chr14	31929933	31929934	chr14:31929934:G:A	rs7151312	G	A	A	SOX2_HMG_3	-2	0	-	0	0	.
chr14	31929949	31929950	chr14:31929950:C:A	rs10146435	C	A	C	SOX2_HMG_3	-18	0	-	0	0	.
chr14	32491912	32491913	chr14:32491913:C:T	rs10130381	C	T	C	SOX2_HMG_3	15	1	+	5.191816357677757	8.034525513854614	AATCATTTTAATTGACG
chr14	32602870	32602871	chr14:32602871:C:T	rs72667969	C	T	C	SOX2_HMG_3	30	0	-	0	0	.
chr14	32725568	32725569	chr14:32725569:A:G	rs56074376	A	G	A	SOX2_HMG_3	18	0	-	0	0	.
chr14	32822278	32822279	chr14:32822279:G:A	rs150110782	G	A	G	SOX2_HMG_3	27	0	+	0	0	.
chr14	32822287	32822288	chr14:32822288:C:T	rs11845640	C	T	c	SOX2_HMG_3	36	0	+	0	0	.
chr14	33150859	33150860	chr14:33150860:C:T	rs17100249	C	T	C	SOX2_HMG_3	30	0	-	0	0	.
chr14	33257230	33257231	chr14:33257231:G:C	rs243297	G	C	G	SOX2_HMG_3	-9	0	-	0	0	.
chr14	33309365	33309366	chr14:33309366:C:T	rs1279473	C	T	C	SOX2_HMG_3	-12	0	-	0	0	.
chr14	33333828	33333829	chr14:33333829:C:G	rs17567572	C	G	C	SOX2_HMG_3	3	1	+	6.826550829005329	-0.08220395030988925	AGTCCATTTTATTGAAG
chr14	33459787	33459788	chr14:33459788:C:A	rs75187969	C	A	C	SOX2_HMG_3	-19	0	-	0	0	.
chr14	33510483	33510484	chr14:33510484:G:A	rs111362667	G	A	G	SOX2_HMG_3	20	0	-	0	0	.
chr14	33510512	33510513	chr14:33510513:C:G	rs1885261	C	G	C	SOX2_HMG_3	-9	0	-	0	0	.
chr14	33693153	33693154	chr14:33693154:T:C	rs10131958	T	C	T	SOX2_HMG_3	-6	0	-	0	0	.
chr14	33769160	33769161	chr14:33769161:T:C	rs733315	T	C	T	SOX2_HMG_3	-16	0	+	0	0	.
chr14	34098466	34098467	chr14:34098467:T:C	rs8009878	T	C	T	SOX2_HMG_3	-7	0	-	0	0	.
chr14	34372492	34372493	chr14:34372493:C:G	rs12891015	C	G	C	SOX2_HMG_3	-14	0	+	0	0	.
chr14	34372515	34372516	chr14:34372516:G:A	rs17102460	G	A	G	SOX2_HMG_3	9	1	+	4.842787917881791	9.423562947035162	AATCAATGCGAATGATG
chr14	34688060	34688061	chr14:34688061:T:G	rs11156854	T	G	G	SOX2_HMG_3	30	0	+	0	0	.
chr14	34702011	34702012	chr14:34702012:G:A	rs12883300	G	A	G	SOX2_HMG_3	7	1	+	3.754837737692815	1.02605061713148	TGGCAATGTTACTGAAT
chr14	34702016	34702017	chr14:34702017:T:C	rs76240393	T	C	T	SOX2_HMG_3	12	1	+	3.754837737692815	-3.1539170416224045	TGGCAATGTTACTGAAT
chr14	34971473	34971474	chr14:34971474:A:C	rs12893021	A	C	A	SOX2_HMG_3	20	0	+	0	0	.
chr14	35321260	35321261	chr14:35321261:T:G	rs7156944	T	G	G	SOX2_HMG_3	6	1	+	2.5456220384216155	-4.3631327408936045	GGTCAATTGTGGTGGTG
chr14	36014449	36014450	chr14:36014450:C:T	rs2145800	C	T	C	SOX2_HMG_3	1	1	-	4.556000818038919	6.387648408118211	GGTCAGTGAAAGTGAAA
chr14	36014450	36014451	chr14:36014451:C:G	rs2145799	C	G	C	SOX2_HMG_3	0	1	-	4.556000818038919	3.8109339163275955	GGTCAGTGAAAGTGAAA
chr14	36066758	36066759	chr14:36066759:T:A	rs11156901	T	A	T	SOX2_HMG_3	-11	0	+	0	0	.
chr14	36604850	36604851	chr14:36604851:T:C	rs72677959	T	C	T	SOX2_HMG_3	4	1	-	5.443009858432406	-1.465744920882815	GAGCATTTTTATTGATT
chr14	37466585	37466586	chr14:37466586:G:A	rs10134469	G	A	A	SOX2_HMG_3	-10	0	-	0	0	.
chr14	37796868	37796869	chr14:37796869:C:T	rs9805910	C	T	C	SOX2_HMG_3	24	0	+	0	0	.
chr14	37887847	37887848	chr14:37887848:G:A	rs143935351	G	A	A	SOX2_HMG_3	-14	0	-	0	0	.
chr14	37968405	37968406	chr14:37968406:C:T	rs10134624	C	T	C	SOX2_HMG_3	33	0	-	0	0	.
chr14	38073546	38073547	chr14:38073547:A:G	rs10132648	A	G	A	SOX2_HMG_3	12	1	-	3.4369143583250557	-3.471840420990164	CTTCAAATTTAGTGAAA
chr14	38089347	38089348	chr14:38089348:T:G	rs2415428	T	G	T	SOX2_HMG_3	-5	0	+	0	0	.
chr14	38174911	38174912	chr14:38174912:C:T	rs4310770	C	T	C	SOX2_HMG_3	33	0	-	0	0	.
chr14	38485726	38485727	chr14:38485727:C:T	rs8020485	C	T	T	SOX2_HMG_3	-2	0	+	0	0	.
chr14	38723437	38723438	chr14:38723438:G:A	rs59566391	G	A	G	SOX2_HMG_3	3	1	-	7.062339094859626	0.15358431554440366	CAACAATGACAGTGGTG
chr14	39090839	39090840	chr14:39090840:T:A	rs10134166	T	A	T	SOX2_HMG_3	2	1	+	7.4935376918426995	3.6259228571646576	GATCAATGCCCTTGTTA
chr14	39113490	39113491	chr14:39113491:G:C	rs2415533	G	C	G	SOX2_HMG_3	1	1	+	4.278205747904342	3.1038094854603187	AGTCAATTGTATTCACT
chr14	39204143	39204144	chr14:39204144:T:C	rs72673365	T	C	T	SOX2_HMG_3	17	0	-	0	0	.
chr14	39390957	39390958	chr14:39390958:A:G	rs73283442	A	G	A	SOX2_HMG_3	14	1	-	2.373999013467163	-1.745525847285236	GGACACTGGTATTGTAG
chr14	39390984	39390985	chr14:39390985:C:T	rs34173090	C	T	C	SOX2_HMG_3	-13	0	-	0	0	.
chr14	40055300	40055301	chr14:40055301:C:G	rs17110201	C	G	T	SOX2_HMG_3	20	0	+	0	0	.
chr14	40055300	40055301	chr14:40055301:C:T	chr14:40055301:C:T	C	T	T	SOX2_HMG_3	20	0	+	0	0	.
chr14	40318295	40318296	chr14:40318296:G:A	rs1546937	G	A	A	SOX2_HMG_3	11	1	+	8.26966572643986	2.99405419742746	AGGCAATGACAGTGAGG
chr14	40581195	40581196	chr14:40581196:T:C	rs34756772	T	C	T	SOX2_HMG_3	-11	0	+	0	0	.
chr14	40849355	40849356	chr14:40849356:G:C	rs8021986	G	C	C	SOX2_HMG_3	-9	0	-	0	0	.
chr14	40870602	40870603	chr14:40870603:A:G	rs10150841	A	G	G	SOX2_HMG_3	4	1	-	4.976718747193388	4.976718747193388	AAACTATGTAATTGAAG
chr14	40870613	40870614	chr14:40870614:T:G	rs12897166	T	G	t	SOX2_HMG_3	-7	0	-	0	0	.
chr14	41301319	41301320	chr14:41301320:G:A	rs2802067	G	A	A	SOX2_HMG_3	15	1	+	5.30729036025988	5.73976394181078	AAGCAATATAAGTGAGC
chr14	41742812	41742813	chr14:41742813:G:A	rs58922111	G	A	A	SOX2_HMG_3	5	1	+	3.132213602012245	10.040968381327465	CATCAGTGGTTTTGAAG
chr14	41786002	41786003	chr14:41786003:A:G	rs117866579	A	G	A	SOX2_HMG_3	6	1	-	2.7248578891054613	-4.183896890209759	GAACAATGCCAGTCAGT
chr14	42508611	42508612	chr14:42508612:T:G	rs10131395	T	G	T	SOX2_HMG_3	10	1	-	3.0285554373136963	-3.880199342001524	GAGGAATGTCATTGGTA
chr14	42560494	42560495	chr14:42560495:C:T	rs73328722	C	T	C	SOX2_HMG_3	21	0	+	0	0	.
chr14	42569263	42569264	chr14:42569264:G:C	rs12898123	G	C	G	SOX2_HMG_3	13	1	+	4.344208590777964	-2.5645461885372556	GCACAATGGTCTTGATT
chr14	42805067	42805068	chr14:42805068:G:A	rs72685940	G	A	G	SOX2_HMG_3	23	0	+	0	0	.
chr14	43153548	43153549	chr14:43153549:T:C	rs1899147	T	C	T	SOX2_HMG_3	11	1	+	5.774863987001586	-0.9178275112307608	TTTCAAAGATATTGAAA
chr14	44405245	44405246	chr14:44405246:A:T	rs17627207	A	T	T	SOX2_HMG_3	-5	0	+	0	0	.
chr14	44455857	44455858	chr14:44455858:T:C	rs72687023	T	C	T	SOX2_HMG_3	4	1	-	3.906306010005347	-3.0024487693098743	GGCCATTGTTAGTGATG
chr14	44532472	44532473	chr14:44532473:T:C	rs2152497	T	C	T	SOX2_HMG_3	-2	0	-	0	0	.
chr14	44549516	44549517	chr14:44549517:G:T	rs17548372	G	T	G	SOX2_HMG_3	10	1	+	5.553103393278711	5.553103393278711	GTTCAATTGTGGTGATG
chr14	44654866	44654867	chr14:44654867:A:G	rs117115682	A	G	A	SOX2_HMG_3	12	1	-	2.7256279069651965	-4.183126872350024	TGGCAATGATATTGCGA
chr14	44702141	44702142	chr14:44702142:C:A	rs17551760	C	A	C	SOX2_HMG_3	27	0	+	0	0	.
chr14	45083821	45083822	chr14:45083822:G:A	rs77954143	G	A	G	SOX2_HMG_3	23	0	+	0	0	.
chr14	46057943	46057944	chr14:46057944:G:A	rs17116885	G	A	G	SOX2_HMG_3	28	0	-	0	0	.
chr14	46490644	46490645	chr14:46490645:T:C	rs28636061	T	C	T	SOX2_HMG_3	17	0	-	0	0	.
chr14	46490656	46490657	chr14:46490657:T:G	rs2642106	T	G	G	SOX2_HMG_3	5	1	-	6.217199011611	-0.6915557677042206	TGACAATTTCAGTGATC
chr14	46661827	46661828	chr14:46661828:G:A	rs80351721	G	A	G	SOX2_HMG_3	-6	0	+	0	0	.
chr14	47291407	47291408	chr14:47291408:A:G	rs75460422	A	G	A	SOX2_HMG_3	29	0	-	0	0	.
chr14	47365090	47365091	chr14:47365091:A:G	rs8006114	A	G	A	SOX2_HMG_3	5	1	+	2.8899777381672522	-4.018777041147967	CTTCAATGGGATTGGGG
chr14	47442152	47442153	chr14:47442153:G:A	chr14:47442153:G:A	G	A	G	SOX2_HMG_3	-13	0	-	0	0	.
chr14	47865775	47865776	chr14:47865776:G:A	rs1950761	G	A	A	SOX2_HMG_3	-8	0	-	0	0	.
chr14	48289213	48289214	chr14:48289214:C:G	rs1620753	C	G	C	SOX2_HMG_3	18	0	+	0	0	.
chr14	48289221	48289222	chr14:48289222:A:G	rs1769514	A	G	G	SOX2_HMG_3	26	0	+	0	0	.
chr14	48289940	48289941	chr14:48289941:A:G	rs1769511	A	G	A	SOX2_HMG_3	20	0	+	0	0	.
chr14	48390075	48390076	chr14:48390076:G:C	rs1440394	G	C	C	SOX2_HMG_3	13	1	+	4.990214024070614	-1.918540755244606	CCTAAATTGTATTGAAG
chr14	48963601	48963602	chr14:48963602:A:C	rs8003886	A	C	C	SOX2_HMG_3	5	1	+	3.221831011518831	-3.6869237677963893	TATCTATGCTATAGATA
chr14	49058484	49058485	chr14:49058485:C:T	rs1956090	C	T	C	SOX2_HMG_3	30	0	+	0	0	.
chr14	49305982	49305983	chr14:49305983:A:G	rs12879782	A	G	A	SOX2_HMG_3	22	0	-	0	0	.
chr14	49581353	49581354	chr14:49581354:C:T	rs17774817	C	T	C	SOX2_HMG_3	-6	0	-	0	0	.
chr14	50014115	50014116	chr14:50014116:C:T	rs2355658	C	T	T	SOX2_HMG_3	-3	0	-	0	0	.
chr14	50378137	50378138	chr14:50378138:A:G	rs1890978	A	G	G	SOX2_HMG_3	17	0	-	0	0	.
chr14	50555046	50555047	chr14:50555047:G:A	rs61476576	G	A	G	SOX2_HMG_3	-9	0	+	0	0	.
chr14	50754953	50754954	chr14:50754954:A:C	rs10132785	A	C	A	SOX2_HMG_3	-3	0	+	0	0	.
chr14	51023168	51023169	chr14:51023169:C:T	rs1953891	C	T	C	SOX2_HMG_3	11	1	-	6.564352207329688	1.28874067831729	GATAAATTTAAGTGATA
chr14	51157315	51157316	chr14:51157316:T:C	rs79268358	T	C	C	SOX2_HMG_3	5	1	-	4.703031130803117	-2.2057236485121043	AAATAATGTAATTGAAA
chr14	51186267	51186268	chr14:51186268:C:G	rs2999387	C	G	G	SOX2_HMG_3	34	0	-	0	0	.
chr14	51293984	51293985	chr14:51293985:G:A	rs7160284	G	A	G	SOX2_HMG_3	-3	0	+	0	0	.
chr14	51444456	51444457	chr14:51444457:T:G	rs7148299	T	G	G	SOX2_HMG_3	1	1	-	5.355229439591934	2.349185587068619	AATGAATGGCAGTGTAA
chr14	51458204	51458205	chr14:51458205:C:T	rs12889345	C	T	C	SOX2_HMG_3	-5	0	+	0	0	.
chr14	51526018	51526019	chr14:51526019:T:G	rs8022389	T	G	T	SOX2_HMG_3	-12	0	+	0	0	.
chr14	51609290	51609291	chr14:51609291:C:T	rs1956580	C	T	T	SOX2_HMG_3	12	1	+	5.971777772533224	12.880532551848445	CATCAATATTATCGTTG
chr14	51609291	51609292	chr14:51609292:G:A	rs7153647	G	A	A	SOX2_HMG_3	13	1	+	5.971777772533224	-0.9369770067819971	CATCAATATTATCGTTG
chr14	51845747	51845748	chr14:51845748:A:T	rs11621466	A	T	A	SOX2_HMG_3	22	0	+	0	0	.
chr14	51931555	51931556	chr14:51931556:T:G	rs1253698	T	G	G	SOX2_HMG_3	30	0	+	0	0	.
chr14	52055376	52055377	chr14:52055377:C:T	rs2029974	C	T	C	SOX2_HMG_3	-7	0	-	0	0	.
chr14	52131410	52131411	chr14:52131411:G:A	rs74786221	G	A	G	SOX2_HMG_3	33	0	-	0	0	.
chr14	52266933	52266934	chr14:52266934:C:T	rs33998702	C	T	A	SOX2_HMG_3	-13	0	+	0	0	.
chr14	52266980	52266981	chr14:52266981:C:T	rs803011	C	T	t	SOX2_HMG_3	34	0	+	0	0	.
chr14	52577506	52577507	chr14:52577507:C:T	rs2357800	C	T	C	SOX2_HMG_3	34	0	+	0	0	.
chr14	52800947	52800948	chr14:52800948:C:T	rs76035854	C	T	C	SOX2_HMG_3	-5	0	-	0	0	.
chr14	53054929	53054930	chr14:53054930:G:A	rs12880404	G	A	A	SOX2_HMG_3	23	0	-	0	0	.
chr14	53525789	53525790	chr14:53525790:A:G	rs117633236	A	G	A	SOX2_HMG_3	6	1	-	6.301158139987192	-0.6075966393280305	AATCAATAGTACTGTTA
chr14	54084785	54084786	chr14:54084786:T:A	rs11621397	T	A	T	SOX2_HMG_3	10	1	-	4.523193236722542	-2.3855615425926784	TAACAATGGCATTAAGA
chr14	54312412	54312413	chr14:54312413:T:C	rs751148248	T	C	T	SOX2_HMG_3	0	1	-	4.905908061058991	5.126502340144285	AAGCAGTGGCAGTGATT
chr14	54441501	54441502	chr14:54441502:T:G	rs192720261	T	G	T	SOX2_HMG_3	34	0	-	0	0	.
chr14	54441554	54441555	chr14:54441555:T:A	rs184540992	T	A	T	SOX2_HMG_3	-19	0	-	0	0	.
chr14	54671755	54671756	chr14:54671756:G:A	rs80235742	G	A	G	SOX2_HMG_3	20	0	+	0	0	.
chr14	55005168	55005169	chr14:55005169:T:C	rs3783646	T	C	T	SOX2_HMG_3	14	1	-	2.354949217046803	-1.826928400254316	ACTCAGTGGGATTGATG
chr14	55028480	55028481	chr14:55028481:A:T	rs1187876	A	T	A	SOX2_HMG_3	14	1	-	8.038573151022366	10.75134699583666	AGCCAATGATATTGTTA
chr14	55029412	55029413	chr14:55029413:G:C	rs1212641	G	C	C	SOX2_HMG_3	3	1	+	4.5258389802563705	11.434593759571591	ATTGAATTGCAGTGATG
chr14	55074702	55074703	chr14:55074703:C:A	rs74880415	C	A	C	SOX2_HMG_3	-18	0	-	0	0	.
chr14	55349891	55349892	chr14:55349892:T:C	rs28716725	T	C	C	SOX2_HMG_3	-18	0	+	0	0	.
chr14	55826955	55826956	chr14:55826956:C:T	rs75341466	C	T	C	SOX2_HMG_3	-12	0	-	0	0	.
chr14	56004353	56004354	chr14:56004354:T:C	rs1188198	T	C	T	SOX2_HMG_3	34	0	-	0	0	.
chr14	56525273	56525274	chr14:56525274:A:G	rs12897575	A	G	A	SOX2_HMG_3	5	1	+	7.109827334012378	0.20107255469715724	AATCAATATCAATGAAA
chr14	56816564	56816565	chr14:56816565:C:T	rs198262	C	T	T	SOX2_HMG_3	6	1	+	7.680998581644862	14.589753360960083	CATCAACGTCAGTGAAA
chr14	56874566	56874567	chr14:56874567:T:A	rs8004898	T	A	T	SOX2_HMG_3	12	1	+	3.1063008750590413	-3.802453904256179	TGACGATGTTATTGAGT
chr14	57512239	57512240	chr14:57512240:C:T	rs398723	C	T	T	SOX2_HMG_3	7	1	-	4.842147056231285	2.1133599356699486	CATCAATGTAATTTTTC
chr14	57559554	57559555	chr14:57559555:A:G	rs112509492	A	G	A	SOX2_HMG_3	15	1	-	2.9098002873058926	0.06709113112903409	GGACAATGTAAGAGATA
chr14	58047155	58047156	chr14:58047156:C:T	rs8013464	C	T	T	SOX2_HMG_3	-17	0	-	0	0	.
chr14	58048792	58048793	chr14:58048793:T:C	rs10483694	T	C	T	SOX2_HMG_3	0	1	-	3.062237806901521	3.2828320859868145	ACTCAATGTCAGTCACT
chr14	58086180	58086181	chr14:58086181:T:C	rs12433262	T	C	C	SOX2_HMG_3	-18	0	+	0	0	.
chr14	58657061	58657062	chr14:58657062:A:G	rs698020	A	G	A	SOX2_HMG_3	11	1	-	3.948698830892341	-2.743992667340005	AATCTTTGTCATTGATA
chr14	58731774	58731775	chr14:58731775:A:C	rs2163616	A	C	A	SOX2_HMG_3	-11	0	+	0	0	.
chr14	58829528	58829529	chr14:58829529:C:T	rs2162491	C	T	C	SOX2_HMG_3	30	0	+	0	0	.
chr14	59015921	59015922	chr14:59015922:T:G	rs7146482	T	G	G	SOX2_HMG_3	29	0	+	0	0	.
chr14	59296034	59296035	chr14:59296035:C:A	rs67935962	C	A	C	SOX2_HMG_3	-9	0	+	0	0	.
chr14	59296037	59296038	chr14:59296038:T:C	rs67324723	T	C	T	SOX2_HMG_3	-6	0	+	0	0	.
chr14	59328790	59328791	chr14:59328791:C:G	rs72726383	C	G	C	SOX2_HMG_3	3	1	+	4.972030091792475	-1.9367246875227464	CACCAATGTCAGTGGGA
chr14	59583700	59583701	chr14:59583701:C:A	rs143983224	C	A	C	SOX2_HMG_3	-10	0	-	0	0	.
chr14	61091014	61091015	chr14:61091015:C:T	rs4902027	C	T	c	SOX2_HMG_3	19	0	+	0	0	.
chr14	61091026	61091027	chr14:61091027:G:C	rs1571384	G	C	G	SOX2_HMG_3	31	0	+	0	0	.
chr14	61178870	61178871	chr14:61178871:A:G	rs140815885	A	G	A	SOX2_HMG_3	34	0	-	0	0	.
chr14	61333201	61333202	chr14:61333202:C:T	rs3783814	C	T	C	SOX2_HMG_3	3	1	+	2.6487301754768025	-4.260024603838417	AATCAGTGCTTTTGAAA
chr14	61385572	61385573	chr14:61385573:C:T	rs117982890	C	T	C	SOX2_HMG_3	3	1	+	5.192026524997554	-1.7167282543176654	GATCAACGTTAATGATA
chr14	61461902	61461903	chr14:61461903:A:G	rs181077320	A	G	A	SOX2_HMG_3	-4	0	-	0	0	.
chr14	61461915	61461916	chr14:61461916:G:A	rs376995319	G	A	G	SOX2_HMG_3	-17	0	-	0	0	.
chr14	61488385	61488386	chr14:61488386:G:A	rs72712345	G	A	G	SOX2_HMG_3	-15	0	+	0	0	.
chr14	61556545	61556546	chr14:61556546:A:C	rs2251244	A	C	A	SOX2_HMG_3	4	1	+	3.63415798144474	-3.2745967978704797	ACACAATGGTACTGAAA
chr14	61670702	61670703	chr14:61670703:T:A	rs808909	T	A	A	SOX2_HMG_3	29	0	+	0	0	.
chr14	61719866	61719867	chr14:61719867:T:C	rs1165378662	T	C	T	SOX2_HMG_3	17	0	+	0	0	.
chr14	61899816	61899817	chr14:61899817:A:G	rs11158366	A	G	A	SOX2_HMG_3	5	1	+	4.5940836088254295	-2.3146711704897935	CATCAATGCTATGGTAC
chr14	62038014	62038015	chr14:62038015:A:G	rs1254913	A	G	A	SOX2_HMG_3	21	0	+	0	0	.
chr14	62546675	62546676	chr14:62546676:T:C	rs7158453	T	C	T	SOX2_HMG_3	23	0	+	0	0	.
chr14	62614972	62614973	chr14:62614973:T:C	rs1906943	T	C	C	SOX2_HMG_3	-10	0	-	0	0	.
chr14	62762551	62762552	chr14:62762552:C:A	rs116023426	C	A	C	SOX2_HMG_3	-14	0	+	0	0	.
chr14	63540983	63540984	chr14:63540984:A:G	rs10136489	A	G	A	SOX2_HMG_3	-2	0	-	0	0	.
chr14	63633035	63633036	chr14:63633036:G:T	rs75496293	G	T	G	SOX2_HMG_3	-10	0	+	0	0	.
chr14	63875443	63875444	chr14:63875444:A:G	rs148362867	A	G	A	SOX2_HMG_3	5	1	-	4.790524690308707	4.790524690308707	TGTCATTGTTATTGTGA
chr14	63982440	63982441	chr14:63982441:T:G	rs74453251	T	G	T	SOX2_HMG_3	33	0	-	0	0	.
chr14	64137915	64137916	chr14:64137916:T:C	rs8007874	T	C	T	SOX2_HMG_3	24	0	-	0	0	.
chr14	64203052	64203053	chr14:64203053:C:T	rs6573548	C	T	C	SOX2_HMG_3	25	0	-	0	0	.
chr14	64567198	64567199	chr14:64567199:C:A	rs112040628	C	A	T	SOX2_HMG_3	27	0	+	0	0	.
chr14	64766463	64766464	chr14:64766464:A:G	rs574982657	A	G	A	SOX2_HMG_3	-15	0	-	0	0	.
chr14	64874023	64874024	chr14:64874024:C:G	rs74056084	C	G	C	SOX2_HMG_3	-3	0	-	0	0	.
chr14	64880930	64880931	chr14:64880931:C:T	rs61012404	C	T	C	SOX2_HMG_3	34	0	+	0	0	.
chr14	65079414	65079415	chr14:65079415:T:C	rs60077675	T	C	T	SOX2_HMG_3	-4	0	-	0	0	.
chr14	65110577	65110578	chr14:65110578:G:T	chr14:65110578:G:T	G	T	G	SOX2_HMG_3	23	0	-	0	0	.
chr14	65412190	65412191	chr14:65412191:C:T	rs1953417	C	T	C	SOX2_HMG_3	-17	0	+	0	0	.
chr14	65790748	65790749	chr14:65790749:A:G	rs11848444	A	G	A	SOX2_HMG_3	11	1	-	3.607080796617039	-3.0856107016153094	AATAAATGCCATTGGGT
chr14	65831767	65831768	chr14:65831768:C:T	rs7146380	C	T	C	SOX2_HMG_3	9	1	+	5.384764218877268	6.191434352814315	TCTCAGTGGCATTGAGA
chr14	65847836	65847837	chr14:65847837:G:A	rs72716478	G	A	G	SOX2_HMG_3	19	0	+	0	0	.
chr14	66249440	66249441	chr14:66249441:G:C	rs8003342	G	C	G	SOX2_HMG_3	22	0	-	0	0	.
chr14	66510855	66510856	chr14:66510856:A:G	rs8005383	A	G	A	SOX2_HMG_3	6	1	-	6.673963989659204	-0.2347907896560173	TGTCAATGTTAATGTTA
chr14	66600566	66600567	chr14:66600567:T:C	rs913402924	T	C	T	SOX2_HMG_3	26	0	-	0	0	.
chr14	66715397	66715398	chr14:66715398:A:G	rs7147505	A	G	A	SOX2_HMG_3	1	1	+	7.231456760210106	5.3998091701308155	TATCAATTTTATTTATC
chr14	66715412	66715413	chr14:66715413:C:T	rs138268233	C	T	C	SOX2_HMG_3	16	1	+	7.231456760210106	8.42822881335046	TATCAATTTTATTTATC
chr14	67010929	67010930	chr14:67010930:A:G	rs1955606	A	G	G	SOX2_HMG_3	8	1	-	3.963745386412182	3.092009033776319	AAACAATGTCAATGTTT
chr14	67556814	67556815	chr14:67556815:A:G	rs1022612823	A	G	A	SOX2_HMG_3	11	1	-	5.4842781760885435	-1.2084133221438034	GAGCCATGTCATTGATC
chr14	68027455	68027456	chr14:68027456:C:T	rs1288932492	C	T	C	SOX2_HMG_3	-6	0	+	0	0	.
chr14	68158400	68158401	chr14:68158401:G:A	rs1555944	G	A	A	SOX2_HMG_3	-11	0	+	0	0	.
chr14	68165094	68165095	chr14:68165095:G:A	rs1952246	G	A	A	SOX2_HMG_3	22	0	-	0	0	.
chr14	68207126	68207127	chr14:68207127:T:C	rs1274647	T	C	C	SOX2_HMG_3	-20	0	+	0	0	.
chr14	68309342	68309343	chr14:68309343:T:C	rs11158729	T	C	T	SOX2_HMG_3	6	1	+	4.922523764045362	-1.9862310152698572	AGTCAATGGCACTGGTA
chr14	68309359	68309360	chr14:68309360:G:A	rs58616347	G	A	G	SOX2_HMG_3	23	0	+	0	0	.
chr14	68330212	68330213	chr14:68330213:A:G	rs2145423	A	G	A	SOX2_HMG_3	10	1	+	3.442435598618594	-3.4663191806966256	AAGCAATTGAAATGATT
chr14	68330225	68330226	chr14:68330226:A:G	rs17828120	A	G	A	SOX2_HMG_3	23	0	+	0	0	.
chr14	68376887	68376888	chr14:68376888:G:C	rs2025009	G	C	C	SOX2_HMG_3	-19	0	-	0	0	.
chr14	68414035	68414036	chr14:68414036:A:G	rs4545737	A	G	A	SOX2_HMG_3	-6	0	-	0	0	.
chr14	68471646	68471647	chr14:68471647:A:G	rs2525507	A	G	A	SOX2_HMG_3	5	1	+	6.742247852090726	-0.16650692722449523	GGTCCATGCTATTGTTG
chr14	68548366	68548367	chr14:68548367:C:T	rs940535849	C	T	C	SOX2_HMG_3	20	0	-	0	0	.
chr14	68548389	68548390	chr14:68548390:G:A	rs192733921	G	A	G	SOX2_HMG_3	-3	0	-	0	0	.
chr14	68656195	68656196	chr14:68656196:C:T	chr14:68656196:C:T	C	T	C	SOX2_HMG_3	26	0	+	0	0	.
chr14	68684628	68684629	chr14:68684629:A:G	rs17756914	A	G	A	SOX2_HMG_3	-20	0	-	0	0	.
chr14	68689382	68689383	chr14:68689383:T:C	rs1007840	T	C	T	SOX2_HMG_3	21	0	-	0	0	.
chr14	68694456	68694457	chr14:68694457:T:C	rs17106154	T	C	T	SOX2_HMG_3	5	1	-	9.649519820314504	2.740765040999283	AGTCAATTGTATTGTGT
chr14	68717052	68717053	chr14:68717053:T:A	rs17106170	T	A	T	SOX2_HMG_3	-2	0	+	0	0	.
chr14	68772069	68772070	chr14:68772070:A:T	rs140992332	A	T	A	SOX2_HMG_3	6	1	-	8.247042882829687	1.3382881035144667	AATCAATTGTATTAAAA
chr14	68772079	68772080	chr14:68772080:C:T	rs72731539	C	T	T	SOX2_HMG_3	-4	0	-	0	0	.
chr14	68940327	68940328	chr14:68940328:G:A	rs56998257	G	A	G	SOX2_HMG_3	-19	0	-	0	0	.
chr14	69585228	69585229	chr14:69585229:A:C	rs893281013	A	C	A	SOX2_HMG_3	8	1	-	3.562185721083537	3.424717801218874	CACCAATTTTGTTGATT
chr14	69781628	69781629	chr14:69781629:T:C	rs113594012	T	C	T	SOX2_HMG_3	-18	0	+	0	0	.
chr14	69781640	69781641	chr14:69781641:G:A	rs17556915	G	A	G	SOX2_HMG_3	-6	0	+	0	0	.
chr14	69841739	69841740	chr14:69841740:A:C	rs148268147	A	C	A	SOX2_HMG_3	10	1	-	2.472859771123977	2.472859771123977	CACCAATGGATTTGAGA
chr14	69841757	69841758	chr14:69841758:C:T	rs80234185	C	T	C	SOX2_HMG_3	-8	0	-	0	0	.
chr14	70092990	70092991	chr14:70092991:A:T	rs1544870	A	T	A	SOX2_HMG_3	0	1	+	4.139597010850564	3.4777954101758706	AAACATTGGCATTGTTA
chr14	70254474	70254475	chr14:70254475:T:C	rs116299079	T	C	T	SOX2_HMG_3	28	0	+	0	0	.
chr14	70399602	70399603	chr14:70399603:A:G	rs2332372	A	G	a	SOX2_HMG_3	-12	0	-	0	0	.
chr14	70422769	70422770	chr14:70422770:C:T	rs146316126	C	T	C	SOX2_HMG_3	13	1	-	10.289664944731141	3.38091016541592	CAGCAATGTCAGTGAGA
chr14	70709300	70709301	chr14:70709301:C:T	rs28550295	C	T	C	SOX2_HMG_3	28	0	-	0	0	.
chr14	70827530	70827531	chr14:70827531:T:C	rs61990553	T	C	t	SOX2_HMG_3	5	1	-	7.142185199007084	0.233430419691863	ATTCAATGATATTCATT
chr14	71086318	71086319	chr14:71086319:G:T	rs11622673	G	T	G	SOX2_HMG_3	36	0	+	0	0	.
chr14	71582888	71582889	chr14:71582889:C:T	rs141274794	C	T	C	SOX2_HMG_3	2	1	-	4.2043892020915	4.2043892020915	GTGCAATGTCATGGATA
chr14	72188193	72188194	chr14:72188194:A:G	rs78873191	A	G	A	SOX2_HMG_3	5	1	+	7.60269164838363	0.6939368690684102	GTCCAATGTTAGTGAAT
chr14	72473795	72473796	chr14:72473796:G:C	rs758265	G	C	C	SOX2_HMG_3	24	0	-	0	0	.
chr14	72736696	72736697	chr14:72736697:A:G	rs117936594	A	G	A	SOX2_HMG_3	6	1	-	4.735985909961297	-2.172768869353924	GCTCAATAGAAGTGTGT
chr14	72781924	72781925	chr14:72781925:C:T	rs144516430	C	T	C	SOX2_HMG_3	-5	0	+	0	0	.
chr14	72781952	72781953	chr14:72781953:A:G	rs72730336	A	G	G	SOX2_HMG_3	23	0	+	0	0	.
chr14	72875198	72875199	chr14:72875199:G:T	rs2080252	G	T	T	SOX2_HMG_3	7	1	+	2.5942339217997907	0.549523417066254	GATCAATGCAAGTTGAG
chr14	72955550	72955551	chr14:72955551:C:G	rs3815460	C	G	C	SOX2_HMG_3	23	0	-	0	0	.
chr14	73023637	73023638	chr14:73023638:G:A	rs4545732	G	A	G	SOX2_HMG_3	-9	0	-	0	0	.
chr14	73224265	73224266	chr14:73224266:C:T	rs362398	C	T	c	SOX2_HMG_3	-20	0	-	0	0	.
chr14	73345516	73345517	chr14:73345517:G:A	rs10136726	G	A	G	SOX2_HMG_3	34	0	-	0	0	.
chr14	73468174	73468175	chr14:73468175:C:A	rs7158218	C	A	A	SOX2_HMG_3	23	0	+	0	0	.
chr14	73582388	73582389	chr14:73582389:G:A	rs35390131	G	A	G	SOX2_HMG_3	-1	0	+	0	0	.
chr14	73662414	73662415	chr14:73662415:C:A	rs2878626	C	A	C	SOX2_HMG_3	2	1	-	2.589169645663644	6.456784480341685	AGGCAATGTCATTAACG
chr14	74254657	74254658	chr14:74254658:T:C	rs10150826	T	C	C	SOX2_HMG_3	32	0	+	0	0	.
chr14	74503707	74503708	chr14:74503708:C:T	rs76132917	C	T	C	SOX2_HMG_3	-10	0	-	0	0	.
chr14	74698613	74698614	chr14:74698614:A:G	rs10138739	A	G	A	SOX2_HMG_3	-18	0	-	0	0	.
chr14	75159338	75159339	chr14:75159339:A:C	rs910316	A	C	A	SOX2_HMG_3	-3	0	+	0	0	.
chr14	75275977	75275978	chr14:75275978:G:T	rs9323608	G	T	T	SOX2_HMG_3	28	0	+	0	0	.
chr14	75588341	75588342	chr14:75588342:A:G	rs1288203768	A	G	A	SOX2_HMG_3	34	0	-	0	0	.
chr14	75631921	75631922	chr14:75631922:T:C	rs12432793	T	C	C	SOX2_HMG_3	15	1	+	5.845103775962748	3.0023946197858895	TGTCAGTTGTAGTGATG
chr14	76185320	76185321	chr14:76185321:G:A	rs11848148	G	A	G	SOX2_HMG_3	-10	0	+	0	0	.
chr14	76385404	76385405	chr14:76385405:T:C	rs17104397	T	C	T	SOX2_HMG_3	-10	0	-	0	0	.
chr14	76473411	76473412	chr14:76473412:C:G	rs36092586	C	G	C	SOX2_HMG_3	31	0	+	0	0	.
chr14	76694961	76694962	chr14:76694962:T:C	rs4899604	T	C	T	SOX2_HMG_3	19	0	-	0	0	.
chr14	76808647	76808648	chr14:76808648:C:T	rs2075774	C	T	T	SOX2_HMG_3	-19	0	-	0	0	.
chr14	76834875	76834876	chr14:76834876:C:T	rs7493768	C	T	C	SOX2_HMG_3	23	0	+	0	0	.
chr14	76918339	76918340	chr14:76918340:C:T	chr14:76918340:C:T	C	T	C	SOX2_HMG_3	0	1	+	3.7093036797062946	3.57197470165763	CATGAATGCTATTGCTG
chr14	77109711	77109712	chr14:77109712:G:A	rs75351083	G	A	G	SOX2_HMG_3	-15	0	-	0	0	.
chr14	77173602	77173603	chr14:77173603:G:C	rs72725310	G	C	G	SOX2_HMG_3	23	0	-	0	0	.
chr14	77581201	77581202	chr14:77581202:A:C	rs994098546	A	C	A	SOX2_HMG_3	9	1	-	4.6241863093838225	-1.8151640617162759	TTTCAATGTTTTTGACT
chr14	77581205	77581206	chr14:77581206:T:C	rs78827872	T	C	T	SOX2_HMG_3	5	1	-	4.6241863093838225	-2.284568469931398	TTTCAATGTTTTTGACT
chr14	77603128	77603129	chr14:77603129:A:G	rs9944097	A	G	A	SOX2_HMG_3	28	0	+	0	0	.
chr14	78018536	78018537	chr14:78018537:G:T	rs4903689	G	T	T	SOX2_HMG_3	17	0	-	0	0	.
chr14	78084467	78084468	chr14:78084468:G:A	rs17106827	G	A	G	SOX2_HMG_3	27	0	-	0	0	.
chr14	78576027	78576028	chr14:78576028:A:C	rs80079773	A	C	C	SOX2_HMG_3	20	0	+	0	0	.
chr14	78836940	78836941	chr14:78836941:A:G	rs72685456	A	G	A	SOX2_HMG_3	-6	0	-	0	0	.
chr14	79159416	79159417	chr14:79159417:C:T	rs2370928	C	T	C	SOX2_HMG_3	-20	0	+	0	0	.
chr14	79878573	79878574	chr14:79878574:C:G	rs10135705	C	G	G	SOX2_HMG_3	30	0	+	0	0	.
chr14	80127730	80127731	chr14:80127731:T:C	rs11623435	T	C	C	SOX2_HMG_3	13	1	+	5.790903254755642	5.790903254755642	GGTCAATGAAAGTTATA
chr14	80138150	80138151	chr14:80138151:A:G	rs1491488	A	G	A	SOX2_HMG_3	6	1	-	4.889444824631017	-2.0193099546842035	AGTAAATGTAAGTGAGA
chr14	80630354	80630355	chr14:80630355:C:T	rs8016670	C	T	T	SOX2_HMG_3	25	0	+	0	0	.
chr14	81031780	81031781	chr14:81031781:C:T	rs61978723	C	T	T	SOX2_HMG_3	20	0	-	0	0	.
chr14	81205751	81205752	chr14:81205752:C:T	rs1227807634	C	T	C	SOX2_HMG_3	-11	0	-	0	0	.
chr14	81234659	81234660	chr14:81234660:T:C	rs12586249	T	C	T	SOX2_HMG_3	-6	0	-	0	0	.
chr14	81775284	81775285	chr14:81775285:A:T	rs77177730	A	T	A	SOX2_HMG_3	8	1	-	4.222386447282613	3.235874580054322	AATAAATGTCATGGATG
chr14	81794201	81794202	chr14:81794202:A:C	rs10131470	A	C	C	SOX2_HMG_3	10	1	+	3.3606323491379904	-3.548122430177229	TGCAAATGTCATTGATA
chr14	81814299	81814300	chr14:81814300:T:G	rs7151862	T	G	G	SOX2_HMG_3	8	1	+	3.58169992214897	3.4442320022843074	GCTGAATTTAATTGAGG
chr14	82385096	82385097	chr14:82385097:T:A	rs73354976	T	A	T	SOX2_HMG_3	34	0	-	0	0	.
chr14	82667564	82667565	chr14:82667565:C:A	rs1777683	C	A	A	SOX2_HMG_3	19	0	-	0	0	.
chr14	82988140	82988141	chr14:82988141:G:A	rs1263459	G	A	A	SOX2_HMG_3	-4	0	+	0	0	.
chr14	83158372	83158373	chr14:83158373:T:C	rs10149498	T	C	T	SOX2_HMG_3	16	1	-	6.9481940752586135	7.2218816916488855	GATCAGTGTCAGTGTTA
chr14	83474160	83474161	chr14:83474161:T:A	rs17118719	T	A	A	SOX2_HMG_3	11	1	+	5.059845106414018	-1.6328463918183274	GAGCAGTGGAATTGAAG
chr14	83710085	83710086	chr14:83710086:A:G	rs1958428	A	G	a	SOX2_HMG_3	4	1	+	2.6732328803494854	-4.235521898965732	GTGCAATGGCCTTGAGG
chr14	84006846	84006847	chr14:84006847:C:T	chr14:84006847:C:T	C	T	C	SOX2_HMG_3	-12	0	+	0	0	.
chr14	84112724	84112725	chr14:84112725:T:G	rs7159548	T	G	T	SOX2_HMG_3	21	0	-	0	0	.
chr14	84129029	84129030	chr14:84129030:A:T	rs72703211	A	T	A	SOX2_HMG_3	-8	0	-	0	0	.
chr14	84209409	84209410	chr14:84209410:C:T	rs67304290	C	T	C	SOX2_HMG_3	14	1	-	1.8299664770979578	6.011844094399077	CTTCAATGGCACTGGGG
chr14	85017176	85017177	chr14:85017177:A:G	rs34238472	A	G	A	SOX2_HMG_3	-15	0	+	0	0	.
chr14	85115901	85115902	chr14:85115902:T:C	rs12437101	T	C	-	SOX2_HMG_3	26	0	+	0	0	.
chr14	85559083	85559084	chr14:85559084:C:T	rs2273151	C	T	C	SOX2_HMG_3	13	1	-	5.080528834556846	-1.828225944758373	GAGCTATGACAGTGATG
chr14	85567029	85567030	chr14:85567030:G:T	rs75371143	G	T	G	SOX2_HMG_3	24	0	+	0	0	.
chr14	85587340	85587341	chr14:85587341:G:T	rs117483892	G	T	G	SOX2_HMG_3	14	1	+	3.001555907805196	4.470659680292021	GATCATTGTAATTGGCA
chr14	85644341	85644342	chr14:85644342:C:G	rs8018835	C	G	C	SOX2_HMG_3	30	0	-	0	0	.
chr14	85653954	85653955	chr14:85653955:A:C	rs17647941	A	C	A	SOX2_HMG_3	22	0	-	0	0	.
chr14	85653989	85653990	chr14:85653990:T:C	rs17647991	T	C	C	SOX2_HMG_3	-13	0	-	0	0	.
chr14	86256850	86256851	chr14:86256851:A:G	rs1505166	A	G	A	SOX2_HMG_3	6	1	-	5.163233029307906	-1.745521750007314	GATCCATTCAAGTGATT
chr14	86674010	86674011	chr14:86674011:T:C	rs11851532	T	C	T	SOX2_HMG_3	12	1	+	3.201068432124674	-3.7076863471905455	CAGCAGTGATAGTGAGA
chr14	86732264	86732265	chr14:86732265:T:C	rs56055505	T	C	T	SOX2_HMG_3	0	1	-	2.576328474310957	2.7969227533962506	AATGAAAGGCATTGAAA
chr14	87332940	87332941	chr14:87332941:C:T	rs10129454	C	T	T	SOX2_HMG_3	-10	0	+	0	0	.
chr14	87430532	87430533	chr14:87430533:G:A	rs57329059	G	A	G	SOX2_HMG_3	4	1	+	5.514686646696644	12.423441426011864	ACTCGATTGTATTGAAG
chr14	87468771	87468772	chr14:87468772:T:A	rs146736449	T	A	T	SOX2_HMG_3	-18	0	+	0	0	.
chr14	88005279	88005280	chr14:88005280:T:A	rs10139355	T	A	T	SOX2_HMG_3	2	1	+	2.2808338554366347	-1.5867809792414058	CATAATTGTCAGTGATG
chr14	88006250	88006251	chr14:88006251:C:T	rs8005161	C	T	C	SOX2_HMG_3	33	0	+	0	0	.
chr14	88096637	88096638	chr14:88096638:C:T	rs751072	C	T	T	SOX2_HMG_3	22	0	+	0	0	.
chr14	88249426	88249427	chr14:88249427:A:T	rs6575002	A	T	T	SOX2_HMG_3	12	1	-	3.2297887826565823	-3.678965996658638	AGTCAACTGCAGTGAGT
chr14	88504580	88504581	chr14:88504581:C:T	rs1998670	C	T	c	SOX2_HMG_3	-13	0	-	0	0	.
chr14	89214675	89214676	chr14:89214676:T:C	rs17716878	T	C	T	SOX2_HMG_3	10	1	-	5.722681540641031	-1.1860732386741892	GGTCGATGCCAGTGAAA
chr14	89292796	89292797	chr14:89292797:G:C	rs759363	G	C	G	SOX2_HMG_3	20	0	-	0	0	.
chr14	89310196	89310197	chr14:89310197:T:G	rs75067100	T	G	T	SOX2_HMG_3	-2	0	+	0	0	.
chr14	89510189	89510190	chr14:89510190:G:A	rs390345	G	A	G	SOX2_HMG_3	36	0	-	0	0	.
chr14	89532035	89532036	chr14:89532036:T:C	rs1756303	T	C	C	SOX2_HMG_3	-5	0	+	0	0	.
chr14	89775868	89775869	chr14:89775869:A:G	rs7161101	A	G	A	SOX2_HMG_3	11	1	-	4.0361803855525356	-2.656511112679811	AAAAAATGGAATTGAAT
chr14	89951619	89951620	chr14:89951620:G:A	rs8013264	G	A	A	SOX2_HMG_3	13	1	+	3.9032104170061914	-3.00554436230903	AATAAATTTCATTGTGT
chr14	90137704	90137705	chr14:90137705:A:C	rs78293127	A	C	A	SOX2_HMG_3	-18	0	+	0	0	.
chr14	90247658	90247659	chr14:90247659:G:A	rs11621045	G	A	A	SOX2_HMG_3	-5	0	-	0	0	.
chr14	90827807	90827808	chr14:90827808:A:G	rs57311938	A	G	G	SOX2_HMG_3	36	0	-	0	0	.
chr14	90976639	90976640	chr14:90976640:C:A	rs1570256	C	A	C	SOX2_HMG_3	22	0	-	0	0	.
chr14	91090350	91090351	chr14:91090351:G:A	rs77314340	G	A	G	SOX2_HMG_3	11	1	+	3.9041269382186594	-1.3714845907937387	GTTGAATGACAGTGAAT
chr14	91114611	91114612	chr14:91114612:A:G	rs941677	A	G	G	SOX2_HMG_3	-14	0	-	0	0	.
chr14	91410992	91410993	chr14:91410993:G:C	rs534408767	G	C	G	SOX2_HMG_3	19	0	-	0	0	.
chr14	91834275	91834276	chr14:91834276:T:G	rs11848727	T	G	T	SOX2_HMG_3	-9	0	-	0	0	.
chr14	91881335	91881336	chr14:91881336:A:G	rs2430347	A	G	G	SOX2_HMG_3	4	1	+	6.361543918241569	-0.5472108610736519	GGTCAATGCATTTGAAG
chr14	92309844	92309845	chr14:92309845:G:A	rs58056224	G	A	G	SOX2_HMG_3	31	0	+	0	0	.
chr14	92349920	92349921	chr14:92349921:A:G	rs78682977	A	G	G	SOX2_HMG_3	36	0	-	0	0	.
chr14	92349938	92349939	chr14:92349939:C:T	rs80123902	C	T	C	SOX2_HMG_3	18	0	-	0	0	.
chr14	92425325	92425326	chr14:92425326:A:G	rs12432913	A	G	A	SOX2_HMG_3	-4	0	+	0	0	.
chr14	92425348	92425349	chr14:92425349:A:G	rs4255720	A	G	G	SOX2_HMG_3	19	0	+	0	0	.
chr14	92585368	92585369	chr14:92585369:G:A	rs10873425	G	A	A	SOX2_HMG_3	32	0	+	0	0	.
chr14	92610180	92610181	chr14:92610181:G:A	rs12887586	G	A	A	SOX2_HMG_3	29	0	-	0	0	.
chr14	92665669	92665670	chr14:92665670:C:T	rs7157523	C	T	C	SOX2_HMG_3	-18	0	+	0	0	.
chr14	93201650	93201651	chr14:93201651:C:T	rs1263391	C	T	C	SOX2_HMG_3	-19	0	-	0	0	.
chr14	93676010	93676011	chr14:93676011:C:T	rs1998901	C	T	c	SOX2_HMG_3	11	1	-	3.195974039500919	-2.079637489511479	TCTCAAAGGCAGTGTTG
chr14	93857422	93857423	chr14:93857423:C:A	rs7154665	C	A	A	SOX2_HMG_3	29	0	+	0	0	.
chr14	93862434	93862435	chr14:93862435:G:A	rs10484039	G	A	A	SOX2_HMG_3	-1	0	-	0	0	.
chr14	93862442	93862443	chr14:93862443:A:T	rs10141633	A	T	A	SOX2_HMG_3	-9	0	-	0	0	.
chr14	93873986	93873987	chr14:93873987:T:C	rs8013393	T	C	C	SOX2_HMG_3	34	0	-	0	0	.
chr14	93873996	93873997	chr14:93873997:G:A	rs8012518	G	A	G	SOX2_HMG_3	24	0	-	0	0	.
chr14	93897283	93897284	chr14:93897284:A:G	rs732910	A	G	A	SOX2_HMG_3	8	1	-	8.4818135008269	7.610077148191037	AAACAATGTCATTGGAA
chr14	93943210	93943211	chr14:93943211:T:C	rs78991601	T	C	T	SOX2_HMG_3	-15	0	+	0	0	.
chr14	94311162	94311163	chr14:94311163:T:G	rs8005719	T	G	G	SOX2_HMG_3	22	0	-	0	0	.
chr14	94374346	94374347	chr14:94374347:G:A	rs75723855	G	A	G	SOX2_HMG_3	-4	0	+	0	0	.
chr14	94375162	94375163	chr14:94375163:A:C	rs1884549	A	C	A	SOX2_HMG_3	30	0	-	0	0	.
chr14	94375204	94375205	chr14:94375205:C:T	rs17751614	C	T	c	SOX2_HMG_3	-12	0	-	0	0	.
chr14	94383544	94383545	chr14:94383545:T:C	rs1028580	T	C	T	SOX2_HMG_3	-10	0	+	0	0	.
chr14	94452381	94452382	chr14:94452382:T:G	rs11845116	T	G	T	SOX2_HMG_3	-9	0	+	0	0	.
chr14	94576537	94576538	chr14:94576538:T:C	rs1885135	T	C	C	SOX2_HMG_3	1	1	-	3.223089039321767	1.391441449242477	TATCACTGTCAGTGTCA
chr14	94615775	94615776	chr14:94615776:C:A	rs11160196	C	A	C	SOX2_HMG_3	15	1	-	3.758850117725361	5.426226135992984	TATCAATGGGATTGGGC
chr14	94655243	94655244	chr14:94655244:G:A	rs72696823	G	A	G	SOX2_HMG_3	8	1	-	5.790855661965781	6.6625920146016435	CATCATTGCTATTGTAT
chr14	94935809	94935810	chr14:94935810:T:C	rs1891855	T	C	C	SOX2_HMG_3	1	1	+	4.230648502958524	4.230648502958524	GTTCAATGGAAGAGAAA
chr14	95037042	95037043	chr14:95037043:C:G	rs66527455	C	G	C	SOX2_HMG_3	17	0	-	0	0	.
chr14	95052875	95052876	chr14:95052876:A:G	rs2353730	A	G	G	SOX2_HMG_3	27	0	+	0	0	.
chr14	95128349	95128350	chr14:95128350:G:A	rs56200135	G	A	A	SOX2_HMG_3	0	1	+	5.256816773097464	5.03622249401217	GGGCAATACAAGTGAAG
chr14	95144414	95144415	chr14:95144415:G:A	rs113197964	G	A	G	SOX2_HMG_3	12	1	-	4.985740538369267	11.894495317684488	AAACAATGTTAGCGAGG
chr14	95249248	95249249	chr14:95249249:G:A	rs925155576	G	A	G	SOX2_HMG_3	18	0	-	0	0	.
chr14	95275369	95275370	chr14:95275370:A:C	rs28677081	A	C	A	SOX2_HMG_3	9	1	+	3.380783284929704	4.432688492939387	TGACAATGAAAGTGACC
chr14	95330005	95330006	chr14:95330006:T:C	rs6575507	T	C	C	SOX2_HMG_3	2	1	+	5.6787323817928215	0.6753603114772329	GGTCAAGGGAAGTGAAG
chr14	95440725	95440726	chr14:95440726:G:A	rs6575511	G	A	A	SOX2_HMG_3	32	0	+	0	0	.
chr14	95445497	95445498	chr14:95445498:T:C	rs10144421	T	C	T	SOX2_HMG_3	1	1	+	4.257482539396477	4.257482539396477	ATGCCATGTCATTGATG
chr14	95935388	95935389	chr14:95935389:C:G	rs117052114	C	G	C	SOX2_HMG_3	-8	0	-	0	0	.
chr14	96068865	96068866	chr14:96068866:C:G	rs2146938	C	G	G	SOX2_HMG_3	36	0	+	0	0	.
chr14	96126790	96126791	chr14:96126791:C:T	rs113193431	C	T	C	SOX2_HMG_3	34	0	-	0	0	.
chr14	96126805	96126806	chr14:96126806:C:T	rs117374193	C	T	C	SOX2_HMG_3	19	0	-	0	0	.
chr14	96924313	96924314	chr14:96924314:G:A	chr14:96924314:G:A	G	A	G	SOX2_HMG_3	29	0	-	0	0	.
chr14	97127880	97127881	chr14:97127881:C:T	rs2295133	C	T	C	SOX2_HMG_3	9	1	-	4.557844655570169	9.138619684723539	AATCAATTCGAGTGTTT
chr14	97416963	97416964	chr14:97416964:A:G	rs11624413	A	G	A	SOX2_HMG_3	28	0	-	0	0	.
chr14	97603100	97603101	chr14:97603101:C:T	rs8005344	C	T	C	SOX2_HMG_3	27	0	-	0	0	.
chr14	97752653	97752654	chr14:97752654:G:A	rs11160404	G	A	G	SOX2_HMG_3	-13	0	+	0	0	.
chr14	98092951	98092952	chr14:98092952:G:A	rs572864818	G	A	G	SOX2_HMG_3	32	0	+	0	0	.
chr14	98304880	98304881	chr14:98304881:T:C	rs8013791	T	C	T	SOX2_HMG_3	12	1	+	7.952780718475891	1.0440259391606697	CATAAATGACATTGAGG
chr14	98351122	98351123	chr14:98351123:G:A	rs145664949	G	A	G	SOX2_HMG_3	33	0	-	0	0	.
chr14	98544377	98544378	chr14:98544378:C:T	rs553716820	C	T	C	SOX2_HMG_3	0	1	-	6.5725035598542245	6.351909280768931	GAACAATGACAGTGGAG
chr14	98691149	98691150	chr14:98691150:C:T	rs11621035	C	T	T	SOX2_HMG_3	15	1	-	1.8646882022508422	2.2971617838017426	ACTCAATGGCCTTGGGA
chr14	98766925	98766926	chr14:98766926:C:T	rs138122607	C	T	C	SOX2_HMG_3	0	1	+	5.86751318728316	5.730184209234496	CTCCAATGACAGTGAAG
chr14	98829082	98829083	chr14:98829083:G:A	rs145442547	G	A	G	SOX2_HMG_3	7	1	+	7.441297775845399	4.712510655284063	TCACAATGGCAGTGAAA
chr14	98907857	98907858	chr14:98907858:T:C	rs8018511	T	C	T	SOX2_HMG_3	11	1	+	5.7014097199911475	-0.9912817782411999	CATCATTTTTATTGAGC
chr14	98960974	98960975	chr14:98960975:G:T	rs59710286	G	T	G	SOX2_HMG_3	-20	0	-	0	0	.
chr14	99068385	99068386	chr14:99068386:T:G	rs807366	T	G	G	SOX2_HMG_3	8	1	+	7.8990919024657655	7.761623982601103	CCACAATGTAAGTGATA
chr14	99136594	99136595	chr14:99136595:T:C	rs10136896	T	C	T	SOX2_HMG_3	36	0	-	0	0	.
chr14	99504956	99504957	chr14:99504957:C:T	rs3918094	C	T	C	SOX2_HMG_3	-7	0	+	0	0	.
chr14	99566219	99566220	chr14:99566220:G:A	chr14:99566220:G:A	G	A	G	SOX2_HMG_3	21	0	-	0	0	.
chr14	99577233	99577234	chr14:99577234:T:C	rs113769244	T	C	T	SOX2_HMG_3	10	1	-	2.7114445452326104	-4.19731023408261	CTGAAATGGTAGTGATA
chr14	99598952	99598953	chr14:99598953:G:A	rs58884100	G	A	G	SOX2_HMG_3	25	0	-	0	0	.
chr14	99700955	99700956	chr14:99700956:T:A	rs574178325	T	A	T	SOX2_HMG_3	27	0	+	0	0	.
chr14	99708937	99708938	chr14:99708938:C:G	rs12434024	C	G	C	SOX2_HMG_3	24	0	-	0	0	.
chr14	99708946	99708947	chr14:99708947:A:G	rs116112284	A	G	A	SOX2_HMG_3	15	1	-	5.258496023686495	2.4157868675096363	AATCAGTGTCAGTGGTA
chr14	99778141	99778142	chr14:99778142:G:A	rs61316733	G	A	G	SOX2_HMG_3	33	0	-	0	0	.
chr14	99791929	99791930	chr14:99791930:G:C	rs7161099	G	C	C	SOX2_HMG_3	5	1	-	2.5029508747394065	2.5029508747394065	GGACACTGCTAGTGAGG
chr14	100416660	100416661	chr14:100416661:C:T	rs190811393	C	T	C	SOX2_HMG_3	-8	0	+	0	0	.
chr14	100607023	100607024	chr14:100607024:T:C	rs117894006	T	C	T	SOX2_HMG_3	2	1	+	5.047235875552783	0.04386380523719624	GATCAATTTCAGTAACG
chr14	100831116	100831117	chr14:100831117:T:C	rs35431412	T	C	T	SOX2_HMG_3	20	0	+	0	0	.
chr14	100834229	100834230	chr14:100834230:C:G	rs2400941	C	G	C	SOX2_HMG_3	3	1	+	4.3848717112770235	-2.5238830680381956	TTTCAATAGTAATGAAG
chr14	101009368	101009369	chr14:101009369:T:C	rs8181981	T	C	C	SOX2_HMG_3	-10	0	+	0	0	.
chr14	101059573	101059574	chr14:101059574:G:A	rs7342570	G	A	G	SOX2_HMG_3	8	1	+	2.9652332630335225	2.116189315669894	TGGCAAAGGCATTGAGG
chr14	101063076	101063077	chr14:101063077:G:A	rs4906033	G	A	A	SOX2_HMG_3	11	1	+	3.610698691327561	-1.6649128376848368	TATGAATATCAGTGTTG
chr14	101063099	101063100	chr14:101063100:G:A	rs4906034	G	A	A	SOX2_HMG_3	34	0	+	0	0	.
chr14	101220542	101220543	chr14:101220543:A:C	rs12050400	A	C	A	SOX2_HMG_3	-11	0	-	0	0	.
chr14	101324375	101324376	chr14:101324376:A:G	rs117246646	A	G	A	SOX2_HMG_3	6	1	-	1.6220044954749178	-5.286750283840303	AGTCAGTGGCAGTGGGA
chr14	101381415	101381416	chr14:101381416:G:A	rs28437801	G	A	A	SOX2_HMG_3	-4	0	-	0	0	.
chr14	101571562	101571563	chr14:101571563:T:C	rs11849893	T	C	C	SOX2_HMG_3	-16	0	+	0	0	.
chr14	101926746	101926747	chr14:101926747:G:A	rs1741144	G	A	G	SOX2_HMG_3	15	1	+	3.9253104362307365	4.357784017781637	TTTCAAAGATAGTGAGA
chr14	101943921	101943922	chr14:101943922:C:A	rs4906168	C	A	C	SOX2_HMG_3	-4	0	-	0	0	.
chr14	102036129	102036130	chr14:102036130:C:T	rs11622472	C	T	C	SOX2_HMG_3	-3	0	+	0	0	.
chr14	102078906	102078907	chr14:102078907:A:G	rs146450565	A	G	A	SOX2_HMG_3	-4	0	-	0	0	.
chr14	102214468	102214469	chr14:102214469:C:G	rs115491181	C	G	C	SOX2_HMG_3	35	0	-	0	0	.
chr14	102594624	102594625	chr14:102594625:T:C	rs1957568	T	C	.	SOX2_HMG_3	6	1	+	5.1732395146451555	-1.7355152646700647	AGTCCATGTTAGTGTTT
chr14	102697117	102697118	chr14:102697118:A:G	rs4900550	A	G	A	SOX2_HMG_3	11	1	-	4.082063400653846	-2.610628097578501	AAGCAATGCTGTTGACA
chr14	103009136	103009137	chr14:103009137:G:A	rs35897010	G	A	G	SOX2_HMG_3	9	1	-	3.878429253944225	4.68509938788127	TGTCACTGCCAGTGAGT
chr14	103209678	103209679	chr14:103209679:T:C	rs182560869	T	C	T	SOX2_HMG_3	-9	0	+	0	0	.
chr14	103328598	103328599	chr14:103328599:G:A	rs34143771	G	A	g	SOX2_HMG_3	-8	0	+	0	0	.
chr14	103418953	103418954	chr14:103418954:A:G	rs35233301	A	G	A	SOX2_HMG_3	-3	0	-	0	0	.
chr14	103494288	103494289	chr14:103494289:C:T	rs4900580	C	T	c	SOX2_HMG_3	-20	0	-	0	0	.
chr14	103868579	103868580	chr14:103868580:A:G	rs61995845	A	G	A	SOX2_HMG_3	22	0	-	0	0	.
chr14	103868594	103868595	chr14:103868595:C:T	rs61995846	C	T	T	SOX2_HMG_3	7	1	-	5.41196720725478	2.683180086693445	AGTCACTGTCAGTGAGT
chr14	103871122	103871123	chr14:103871123:T:C	rs78113926	T	C	T	SOX2_HMG_3	10	1	-	9.299775199763156	2.3910204204479353	GAGCAATGCCATTGTAA
chr14	104198470	104198471	chr14:104198471:A:G	rs10220498	A	G	G	SOX2_HMG_3	31	0	+	0	0	.
chr14	104267643	104267644	chr14:104267644:A:G	rs13313386	A	G	A	SOX2_HMG_3	16	1	+	9.281075779571852	9.554763395962123	CATAAATGTAATTGATA
chr14	104416846	104416847	chr14:104416847:A:T	rs4906458	A	T	A	SOX2_HMG_3	-15	0	+	0	0	.
chr14	104649894	104649895	chr14:104649895:G:T	rs8023004	G	T	T	SOX2_HMG_3	-1	0	-	0	0	.
chr14	104708747	104708748	chr14:104708748:A:G	rs11850821	A	G	G	SOX2_HMG_3	29	0	+	0	0	.
chr14	104717931	104717932	chr14:104717932:T:A	rs7157045	T	A	T	SOX2_HMG_3	10	1	-	2.1179558534131386	-4.790798925902081	CGGCAGTGGCAGTGAAG
chr14	104724846	104724847	chr14:104724847:C:T	rs895466478	C	T	C	SOX2_HMG_3	23	0	-	0	0	.
chr14	104724882	104724883	chr14:104724883:T:G	rs74887748	T	G	T	SOX2_HMG_3	-13	0	-	0	0	.
chr14	104859493	104859494	chr14:104859494:C:T	rs111063723	C	T	-	SOX2_HMG_3	16	1	-	3.6951029712203414	3.42141535483007	GATGAATGGTGGTGATG
chr14	104859911	104859912	chr14:104859912:C:T	rs145860637	C	T	-	SOX2_HMG_3	-3	0	-	0	0	.
chr14	104894716	104894717	chr14:104894717:A:G	rs199553262	A	G	A	SOX2_HMG_3	5	1	+	5.217453410205364	-1.6913013691098606	TATCAATGCCATCGTGG
chr14	104948862	104948863	chr14:104948863:G:C	rs10145566	G	C	-	SOX2_HMG_3	13	1	+	1.613159332093376	-5.295595447221844	GGTCAGTGGTCTTGAGG
chr14	104950809	104950810	chr14:104950810:A:G	rs2013445	A	G	G	SOX2_HMG_3	-20	0	+	0	0	.
chr14	104968154	104968155	chr14:104968155:C:A	rs867158094	C	A	C	SOX2_HMG_3	23	0	-	0	0	.
chr14	104983168	104983169	chr14:104983169:A:G	rs73357598	A	G	A	SOX2_HMG_3	6	1	-	2.4109939009932835	-4.497760878321936	GCTCAATGGCTGTGTGG
chr14	105290553	105290554	chr14:105290554:A:G	rs11625098	A	G	A	SOX2_HMG_3	-13	0	+	0	0	.
chr14	105669972	105669973	chr14:105669973:A:G	rs7154333	A	G	.	SOX2_HMG_3	2	1	-	2.16906253903454	-2.834309531281047	ACTCAATGCCCGTGAGC
chr14	105707821	105707822	chr14:105707822:C:T	rs749041167	C	T	.	SOX2_HMG_3	-11	0	+	0	0	.
chr14	105707853	105707854	chr14:105707854:T:C	rs1140166	T	C	.	SOX2_HMG_3	21	0	+	0	0	.
chr14	105830598	105830599	chr14:105830599:T:C	rs57183756	T	C	.	SOX2_HMG_3	-2	0	+	0	0	.
chr14	106001932	106001933	chr14:106001933:G:A	rs55985216	G	A	.	SOX2_HMG_3	-12	0	-	0	0	.
chr14	106373821	106373822	chr14:106373822:C:G	rs587742910	C	G	c	SOX2_HMG_3	-18	0	-	0	0	.
chr14	106539509	106539510	chr14:106539510:A:T	rs7160063	A	T	N	SOX2_HMG_3	22	0	-	0	0	.
chr14	106842109	106842110	chr14:106842110:A:G	rs2337453	A	G	.	SOX2_HMG_3	-8	0	+	0	0	.
chr15	20258397	20258398	chr15:20258398:C:T	rs8033265	C	T	c	SOX2_HMG_3	-11	0	-	0	0	.
chr15	20263358	20263359	chr15:20263359:T:C	rs2123302	T	C	N	SOX2_HMG_3	2	1	-	3.8654096808863585	3.8654096808863585	GGACAATGGGAGTGAAA
chr15	20334659	20334660	chr15:20334660:C:T	rs55714212	C	T	c	SOX2_HMG_3	28	0	+	0	0	.
chr15	20669170	20669171	chr15:20669171:T:A	rs71468614	T	A	A	SOX2_HMG_3	16	1	-	3.710284686177176	3.180901860791258	GTTAAATGATATTGGTA
chr15	20669770	20669771	chr15:20669771:A:G	rs7497715	A	G	A	SOX2_HMG_3	28	0	-	0	0	.
chr15	20669796	20669797	chr15:20669797:A:G	rs7497743	A	G	A	SOX2_HMG_3	2	1	-	6.3258083353538375	1.3224362650382513	TATAAATAATATTGAAG
chr15	20672525	20672526	chr15:20672526:A:G	rs10902997	A	G	G	SOX2_HMG_3	-4	0	-	0	0	.
chr15	21270483	21270484	chr15:21270484:T:G	rs4983767	T	G	T	SOX2_HMG_3	-3	0	-	0	0	.
chr15	21485250	21485251	chr15:21485251:T:C	rs4779449	T	C	T	SOX2_HMG_3	21	0	+	0	0	.
chr15	22273246	22273247	chr15:22273247:C:A	rs4779400	C	A	C	SOX2_HMG_3	0	1	+	3.16539742012245	3.6898700427484794	CATCATTTAAAGTGAGA
chr15	22851673	22851674	chr15:22851674:C:T	rs117894530	C	T	C	SOX2_HMG_3	-17	0	+	0	0	.
chr15	23482507	23482508	chr15:23482508:G:A	rs2345408	G	A	G	SOX2_HMG_3	7	1	+	6.6475112305818715	3.918724110020537	AGTCAATGTCAGGGAAG
chr15	23485263	23485264	chr15:23485264:A:G	rs2345410	A	G	A	SOX2_HMG_3	-17	0	-	0	0	.
chr15	24662465	24662466	chr15:24662466:T:C	rs7181915	T	C	C	SOX2_HMG_3	35	0	+	0	0	.
chr15	24809699	24809700	chr15:24809700:C:T	rs2123682	C	T	C	SOX2_HMG_3	36	0	-	0	0	.
chr15	25378545	25378546	chr15:25378546:T:C	rs60468744	T	C	T	SOX2_HMG_3	-2	0	-	0	0	.
chr15	25404050	25404051	chr15:25404051:G:A	rs116868056	G	A	G	SOX2_HMG_3	3	1	-	6.544447407188384	-0.3643073721268379	GCTCAATGGTATTAAGT
chr15	25527202	25527203	chr15:25527203:G:A	rs11161187	G	A	G	SOX2_HMG_3	35	0	+	0	0	.
chr15	25767040	25767041	chr15:25767041:C:T	rs117865171	C	T	C	SOX2_HMG_3	27	0	+	0	0	.
chr15	25767046	25767047	chr15:25767047:G:A	rs11854600	G	A	G	SOX2_HMG_3	33	0	+	0	0	.
chr15	25822438	25822439	chr15:25822439:C:T	rs11630331	C	T	C	SOX2_HMG_3	31	0	+	0	0	.
chr15	25831559	25831560	chr15:25831560:A:G	rs74767497	A	G	A	SOX2_HMG_3	21	0	+	0	0	.
chr15	25988983	25988984	chr15:25988984:A:G	rs11633753	A	G	A	SOX2_HMG_3	30	0	-	0	0	.
chr15	26888307	26888308	chr15:26888308:G:T	rs80256359	G	T	G	SOX2_HMG_3	-5	0	+	0	0	.
chr15	26888321	26888322	chr15:26888322:C:A	rs9744196	C	A	C	SOX2_HMG_3	9	1	+	3.772034148003927	2.720128939994244	GAACAATTTCTTTGAGG
chr15	27388526	27388527	chr15:27388527:A:G	rs62001352	A	G	A	SOX2_HMG_3	16	1	-	9.316632242585484	8.11986018944513	TATCAATGGTACTGAAT
chr15	27401281	27401282	chr15:27401282:T:A	rs7166711	T	A	T	SOX2_HMG_3	2	1	+	5.662892650329941	1.7952778156518998	CATCAATGTGATTGGAT
chr15	28265479	28265480	chr15:28265480:A:T	rs150568801	A	T	.	SOX2_HMG_3	12	1	-	2.358970097726407	-4.549784681588813	GCTCAGTGGCATTGGGG
chr15	28955487	28955488	chr15:28955488:T:G	rs11857861	T	G	T	SOX2_HMG_3	15	1	+	9.306093695108027	7.638717676840404	AATCAATTTTAATGATT
chr15	28955545	28955546	chr15:28955546:A:G	rs16954826	A	G	A	SOX2_HMG_3	5	1	+	4.122520244325823	-2.7862345349893975	AAGAAATGTTATTGTAG
chr15	29271172	29271173	chr15:29271173:G:A	rs480675	G	A	A	SOX2_HMG_3	-17	0	+	0	0	.
chr15	29338204	29338205	chr15:29338205:G:A	rs78224356	G	A	G	SOX2_HMG_3	-15	0	-	0	0	.
chr15	29469705	29469706	chr15:29469706:C:T	rs8025311	C	T	C	SOX2_HMG_3	-7	0	-	0	0	.
chr15	29544744	29544745	chr15:29544745:A:C	rs8040300	A	C	C	SOX2_HMG_3	22	0	-	0	0	.
chr15	29544782	29544783	chr15:29544783:C:T	rs11636716	C	T	C	SOX2_HMG_3	-16	0	-	0	0	.
chr15	29989804	29989805	chr15:29989805:A:G	rs72723264	A	G	A	SOX2_HMG_3	34	0	-	0	0	.
chr15	29989819	29989820	chr15:29989820:A:G	rs79713568	A	G	A	SOX2_HMG_3	19	0	-	0	0	.
chr15	31079787	31079788	chr15:31079788:T:G	chr15:31079788:T:G	T	G	T	SOX2_HMG_3	14	1	-	7.045722997744273	0.21342429217757997	GCTCATTGCTATTGAAG
chr15	31340874	31340875	chr15:31340875:A:C	rs149749886	A	C	A	SOX2_HMG_3	-17	0	+	0	0	.
chr15	31455851	31455852	chr15:31455852:G:T	rs67634762	G	T	G	SOX2_HMG_3	3	1	-	4.613054008720868	-2.2957007705943524	TCTCAAGGGCATTGTTG
chr15	31455956	31455957	chr15:31455957:C:A	rs77315429	C	A	C	SOX2_HMG_3	-8	0	-	0	0	.
chr15	31609491	31609492	chr15:31609492:A:G	rs2085667	A	G	A	SOX2_HMG_3	31	0	-	0	0	.
chr15	31669361	31669362	chr15:31669362:A:G	rs4041945	A	G	A	SOX2_HMG_3	5	1	+	3.1474944828713856	-3.7612602964438366	GGTCAATGGAGTTGTGT
chr15	32005968	32005969	chr15:32005969:A:G	rs7178622	A	G	G	SOX2_HMG_3	31	0	-	0	0	.
chr15	32685548	32685549	chr15:32685549:T:C	rs56338436	T	C	T	SOX2_HMG_3	0	1	+	2.676487394934745	2.8138163729834096	TATCAATGTTTGTAATA
chr15	32956672	32956673	chr15:32956673:C:A	rs74014360	C	A	C	SOX2_HMG_3	-20	0	-	0	0	.
chr15	32970535	32970536	chr15:32970536:T:C	rs8034555	T	C	C	SOX2_HMG_3	5	1	-	7.237267265539876	0.3285124862246562	TGACAATGACAGTGAAT
chr15	33356895	33356896	chr15:33356896:G:A	rs11072413	G	A	G	SOX2_HMG_3	25	0	-	0	0	.
chr15	33581549	33581550	chr15:33581550:G:A	rs2077268	G	A	A	SOX2_HMG_3	-9	0	-	0	0	.
chr15	33675464	33675465	chr15:33675465:C:T	rs189158226	C	T	T	SOX2_HMG_3	17	0	+	0	0	.
chr15	34336822	34336823	chr15:34336823:C:T	rs73374490	C	T	C	SOX2_HMG_3	-20	0	-	0	0	.
chr15	34789149	34789150	chr15:34789150:C:G	rs189725849	C	G	C	SOX2_HMG_3	-11	0	-	0	0	.
chr15	34855143	34855144	chr15:34855144:A:G	rs3743121	A	G	G	SOX2_HMG_3	-4	0	-	0	0	.
chr15	34920046	34920047	chr15:34920047:G:C	rs367567254	G	C	G	SOX2_HMG_3	-20	0	+	0	0	.
chr15	35192804	35192805	chr15:35192805:A:G	rs55763113	A	G	A	SOX2_HMG_3	-2	0	-	0	0	.
chr15	35218909	35218910	chr15:35218910:G:A	rs117866038	G	A	G	SOX2_HMG_3	19	0	-	0	0	.
chr15	35392941	35392942	chr15:35392942:C:G	rs28576618	C	G	C	SOX2_HMG_3	-17	0	+	0	0	.
chr15	35458847	35458848	chr15:35458848:A:G	rs10851974	A	G	G	SOX2_HMG_3	4	1	+	4.825542010158986	-2.0832127691562334	GATCAAAACCAGTGAAA
chr15	35557701	35557702	chr15:35557702:A:C	rs59006481	A	C	A	SOX2_HMG_3	15	1	-	2.903463617361469	1.2360875990938465	TACCTATGCCAGTGATA
chr15	35557722	35557723	chr15:35557723:T:G	rs73384548	T	G	T	SOX2_HMG_3	-6	0	-	0	0	.
chr15	35753453	35753454	chr15:35753454:G:C	rs149135772	G	C	G	SOX2_HMG_3	31	0	+	0	0	.
chr15	35765341	35765342	chr15:35765342:A:G	rs11856070	A	G	A	SOX2_HMG_3	2	1	-	8.82141458796775	3.818042517652163	AATCAATGTTATTTACA
chr15	35847204	35847205	chr15:35847205:T:C	rs2646780	T	C	T	SOX2_HMG_3	5	1	-	3.367613024526688	-3.541141754788532	ATTCAATTTCATGGTTG
chr15	35853404	35853405	chr15:35853405:C:A	rs1497805	C	A	C	SOX2_HMG_3	30	0	+	0	0	.
chr15	35933536	35933537	chr15:35933537:A:C	rs11073131	A	C	A	SOX2_HMG_3	-13	0	+	0	0	.
chr15	36106834	36106835	chr15:36106835:A:G	rs12592136	A	G	A	SOX2_HMG_3	12	1	-	6.65311655663689	-0.25563822267832914	AAAGAATGTTAGTGATG
chr15	36109982	36109983	chr15:36109983:G:A	rs11854628	G	A	G	SOX2_HMG_3	18	0	+	0	0	.
chr15	36208062	36208063	chr15:36208063:C:A	rs17630229	C	A	C	SOX2_HMG_3	-20	0	-	0	0	.
chr15	36483860	36483861	chr15:36483861:A:G	rs2167992	A	G	G	SOX2_HMG_3	4	1	+	7.083684658628547	0.17492987931332782	AAACAGTGATATTGATG
chr15	36881743	36881744	chr15:36881744:A:G	rs4451907	A	G	A	SOX2_HMG_3	36	0	+	0	0	.
chr15	36952084	36952085	chr15:36952085:G:A	rs548208020	G	A	G	SOX2_HMG_3	20	0	-	0	0	.
chr15	37196095	37196096	chr15:37196096:C:T	rs72712905	C	T	C	SOX2_HMG_3	18	0	+	0	0	.
chr15	37880320	37880321	chr15:37880321:T:G	chr15:37880321:T:G	T	G	T	SOX2_HMG_3	3	1	+	3.3926606682437357	3.3926606682437357	GATTAATGACAGTGTCG
chr15	37892325	37892326	chr15:37892326:A:G	rs554237880	A	G	A	SOX2_HMG_3	-15	0	-	0	0	.
chr15	38308629	38308630	chr15:38308630:A:G	rs73398438	A	G	A	SOX2_HMG_3	-17	0	+	0	0	.
chr15	38697568	38697569	chr15:38697569:G:A	rs35024396	G	A	a	SOX2_HMG_3	11	1	+	5.887198968493893	0.6115874394814942	GAGCAAAGATAGTGATG
chr15	38872851	38872852	chr15:38872852:A:G	rs4614698	A	G	G	SOX2_HMG_3	31	0	+	0	0	.
chr15	38941805	38941806	chr15:38941806:G:A	rs540762102	G	A	G	SOX2_HMG_3	-8	0	+	0	0	.
chr15	39063658	39063659	chr15:39063659:G:A	rs1368814	G	A	A	SOX2_HMG_3	33	0	+	0	0	.
chr15	39075333	39075334	chr15:39075334:A:G	rs12595617	A	G	G	SOX2_HMG_3	29	0	-	0	0	.
chr15	39075353	39075354	chr15:39075354:A:G	rs12915961	A	G	A	SOX2_HMG_3	9	1	-	4.453837139598807	3.6471670056617618	CAGCAATGCTAGGGATT
chr15	39079858	39079859	chr15:39079859:C:T	rs12372998	C	T	t	SOX2_HMG_3	8	1	-	7.406201683731535	6.557157736367906	TATAAATGGCAGTGAAA
chr15	39079859	39079860	chr15:39079860:C:T	rs12372999	C	T	t	SOX2_HMG_3	7	1	-	7.406201683731535	4.677414563170199	TATAAATGGCAGTGAAA
chr15	39127707	39127708	chr15:39127708:A:G	rs61594674	A	G	A	SOX2_HMG_3	-4	0	-	0	0	.
chr15	39184935	39184936	chr15:39184936:A:G	rs78740587	A	G	A	SOX2_HMG_3	7	1	-	7.476107738795887	2.787976032093449	TGTCAATTTTATTGCTG
chr15	39205791	39205792	chr15:39205792:A:G	rs17684646	A	G	A	SOX2_HMG_3	21	0	-	0	0	.
chr15	39417982	39417983	chr15:39417983:T:C	rs760934018	T	C	G	SOX2_HMG_3	-19	0	+	0	0	.
chr15	39700118	39700119	chr15:39700119:T:C	rs2254947	T	C	T	SOX2_HMG_3	-2	0	+	0	0	.
chr15	39778313	39778314	chr15:39778314:G:A	rs12439384	G	A	G	SOX2_HMG_3	34	0	-	0	0	.
chr15	39819956	39819957	chr15:39819957:A:G	rs676455	A	G	G	SOX2_HMG_3	-14	0	-	0	0	.
chr15	39970357	39970358	chr15:39970358:A:G	rs10851392	A	G	G	SOX2_HMG_3	8	1	-	7.7675591399558	6.895822787319939	CATAAATGTTATTGACT
chr15	40006491	40006492	chr15:40006492:G:A	rs73388599	G	A	G	SOX2_HMG_3	7	1	+	4.3094917034215685	1.5807045828602344	CATCAGTGGTAATGATA
chr15	40012205	40012206	chr15:40012206:A:C	rs12903784	A	C	A	SOX2_HMG_3	30	0	+	0	0	.
chr15	40084890	40084891	chr15:40084891:T:C	rs7183977	T	C	t	SOX2_HMG_3	-3	0	-	0	0	.
chr15	40090239	40090240	chr15:40090240:T:C	rs10518679	T	C	T	SOX2_HMG_3	1	1	+	4.522200689325688	4.522200689325688	CTTCAATAGTACTGAAG
chr15	40126555	40126556	chr15:40126556:T:C	rs116432681	T	C	-	SOX2_HMG_3	-8	0	-	0	0	.
chr15	40319659	40319660	chr15:40319660:T:C	rs11070264	T	C	T	SOX2_HMG_3	15	1	+	4.617901044964725	1.7751918887878668	AATCACTGGTATAGATA
chr15	40522222	40522223	chr15:40522223:T:C	rs6492951	T	C	T	SOX2_HMG_3	-3	0	+	0	0	.
chr15	40593963	40593964	chr15:40593964:A:T	rs185473217	A	T	A	SOX2_HMG_3	4	1	+	3.8292502366168013	-3.079504542698419	ACGCAATGTTATGGAAG
chr15	40755859	40755860	chr15:40755860:G:A	rs7175361	G	A	G	SOX2_HMG_3	13	1	+	7.6186017202916405	0.7098469409764195	TAACAATTTTATTGTGA
chr15	41498261	41498262	chr15:41498262:C:T	rs1757460	C	T	C	SOX2_HMG_3	-19	0	+	0	0	.
chr15	41978531	41978532	chr15:41978532:C:T	rs4924592	C	T	T	SOX2_HMG_3	20	0	+	0	0	.
chr15	42499259	42499260	chr15:42499260:C:T	rs2595939	C	T	-	SOX2_HMG_3	-7	0	+	0	0	.
chr15	42696702	42696703	chr15:42696703:G:A	rs142591139	G	A	G	SOX2_HMG_3	19	0	+	0	0	.
chr15	43267761	43267762	chr15:43267762:T:A	rs505249	T	A	A	SOX2_HMG_3	16	1	-	2.661736839900036	2.1323540145141178	GGACAATGCTGGTGAAA
chr15	44710502	44710503	chr15:44710503:T:C	rs78335029	T	C	T	SOX2_HMG_3	14	1	-	7.219976983855359	3.0380993665542393	CGGCAATTTTAGTGAGA
chr15	44710534	44710535	chr15:44710535:T:C	rs3759876	T	C	T	SOX2_HMG_3	-18	0	-	0	0	.
chr15	45200070	45200071	chr15:45200071:C:T	rs142051912	C	T	C	SOX2_HMG_3	36	0	-	0	0	.
chr15	45200540	45200541	chr15:45200541:C:A	chr15:45200541:C:A	C	A	C	SOX2_HMG_3	-10	0	+	0	0	.
chr15	45241775	45241776	chr15:45241776:T:C	rs28897155	T	C	C	SOX2_HMG_3	20	0	+	0	0	.
chr15	45551816	45551817	chr15:45551817:C:A	rs186909624	C	A	C	SOX2_HMG_3	1	1	+	6.302120022417903	9.308163874941217	GCTCCATGGTATTGTTG
chr15	45617358	45617359	chr15:45617359:A:T	rs150504426	A	T	A	SOX2_HMG_3	35	0	-	0	0	.
chr15	45642641	45642642	chr15:45642642:G:A	rs607594	G	A	G	SOX2_HMG_3	-10	0	+	0	0	.
chr15	45642670	45642671	chr15:45642671:C:A	rs607541	C	A	A	SOX2_HMG_3	19	0	+	0	0	.
chr15	45862137	45862138	chr15:45862138:G:C	rs117437423	G	C	G	SOX2_HMG_3	7	1	+	9.621352354878416	2.888510143442442	AGGCAATGTAATTGAGG
chr15	46015275	46015276	chr15:46015276:A:G	rs12908219	A	G	A	SOX2_HMG_3	-13	0	+	0	0	.
chr15	46390537	46390538	chr15:46390538:A:G	rs77905174	A	G	A	SOX2_HMG_3	-11	0	+	0	0	.
chr15	46595817	46595818	chr15:46595818:T:C	rs16957078	T	C	T	SOX2_HMG_3	18	0	+	0	0	.
chr15	46652455	46652456	chr15:46652456:C:T	rs7183405	C	T	C	SOX2_HMG_3	25	0	+	0	0	.
chr15	46852860	46852861	chr15:46852861:T:C	rs187653871	T	C	T	SOX2_HMG_3	12	1	+	3.5439597474116127	-3.3647950319036077	AGTCAATGCTCTTGGAA
chr15	47140301	47140302	chr15:47140302:C:T	rs28417512	C	T	C	SOX2_HMG_3	36	0	-	0	0	.
chr15	47207111	47207112	chr15:47207112:A:G	rs7168212	A	G	G	SOX2_HMG_3	-3	0	+	0	0	.
chr15	47323139	47323140	chr15:47323140:G:A	rs116893619	G	A	G	SOX2_HMG_3	33	0	+	0	0	.
chr15	47394392	47394393	chr15:47394393:C:T	rs11070582	C	T	C	SOX2_HMG_3	-2	0	-	0	0	.
chr15	47843366	47843367	chr15:47843367:C:T	rs785016	C	T	T	SOX2_HMG_3	24	0	-	0	0	.
chr15	48963365	48963366	chr15:48963366:C:A	rs181281946	C	A	C	SOX2_HMG_3	21	0	-	0	0	.
chr15	49415447	49415448	chr15:49415448:T:A	rs11639423	T	A	T	SOX2_HMG_3	-20	0	-	0	0	.
chr15	49493593	49493594	chr15:49493594:A:G	rs34918968	A	G	A	SOX2_HMG_3	36	0	-	0	0	.
chr15	49620570	49620571	chr15:49620571:C:T	rs13329455	C	T	C	SOX2_HMG_3	-9	0	+	0	0	.
chr15	49689778	49689779	chr15:49689779:T:C	rs12905627	T	C	C	SOX2_HMG_3	-18	0	-	0	0	.
chr15	49815827	49815828	chr15:49815828:G:A	rs1507584	G	A	G	SOX2_HMG_3	28	0	-	0	0	.
chr15	49826927	49826928	chr15:49826928:C:T	rs4393520	C	T	C	SOX2_HMG_3	34	0	-	0	0	.
chr15	49871656	49871657	chr15:49871657:A:G	rs8041979	A	G	A	SOX2_HMG_3	-2	0	-	0	0	.
chr15	50142873	50142874	chr15:50142874:A:G	rs35507379	A	G	A	SOX2_HMG_3	11	1	-	1.5190025045674593	-5.173688993664886	AGTCAAGGCCATGGATG
chr15	50770543	50770544	chr15:50770544:A:G	rs8038437	A	G	A	SOX2_HMG_3	-10	0	-	0	0	.
chr15	51076039	51076040	chr15:51076040:T:C	rs17522120	T	C	T	SOX2_HMG_3	-4	0	+	0	0	.
chr15	51204071	51204072	chr15:51204072:C:T	rs146169068	C	T	C	SOX2_HMG_3	-8	0	-	0	0	.
chr15	51315131	51315132	chr15:51315132:C:G	rs144432092	C	G	C	SOX2_HMG_3	-20	0	-	0	0	.
chr15	51672667	51672668	chr15:51672668:T:C	rs1378892	T	C	C	SOX2_HMG_3	8	1	+	7.487720363165943	6.61598401053008	GAGCAACGTTATTGATT
chr15	51735777	51735778	chr15:51735778:G:A	rs114826053	G	A	G	SOX2_HMG_3	11	1	+	4.237119138891809	-1.038492390120589	AATCAACTCAAGTGAAA
chr15	51835032	51835033	chr15:51835033:T:C	rs6493526	T	C	T	SOX2_HMG_3	-16	0	-	0	0	.
chr15	51879059	51879060	chr15:51879060:T:C	rs186215209	T	C	T	SOX2_HMG_3	11	1	+	7.5029973914021175	0.8103058931697706	TGGCAATGGAATTGTTA
chr15	52100857	52100858	chr15:52100858:G:C	rs74013702	G	C	G	SOX2_HMG_3	-7	0	+	0	0	.
chr15	52206162	52206163	chr15:52206163:G:A	rs4776016	G	A	A	SOX2_HMG_3	9	1	-	5.5037985443205875	6.310468678257634	GGACAATGACAGTGTGA
chr15	52484045	52484046	chr15:52484046:G:C	rs7168981	G	C	G	SOX2_HMG_3	-1	0	+	0	0	.
chr15	52484078	52484079	chr15:52484079:T:A	rs17707984	T	A	A	SOX2_HMG_3	32	0	+	0	0	.
chr15	52499644	52499645	chr15:52499645:T:G	rs11858875	T	G	T	SOX2_HMG_3	18	0	+	0	0	.
chr15	52733494	52733495	chr15:52733495:C:A	rs1648354	C	A	A	SOX2_HMG_3	-19	0	+	0	0	.
chr15	52768958	52768959	chr15:52768959:T:C	rs2440327	T	C	C	SOX2_HMG_3	34	0	-	0	0	.
chr15	52789023	52789024	chr15:52789024:C:A	rs2075613	C	A	C	SOX2_HMG_3	21	0	-	0	0	.
chr15	53271716	53271717	chr15:53271717:T:C	rs12912947	T	C	T	SOX2_HMG_3	-18	0	-	0	0	.
chr15	53315251	53315252	chr15:53315252:T:C	rs10152269	T	C	C	SOX2_HMG_3	15	1	+	4.629277045861411	1.7865678896845518	CAGCAATTCTTTTGATG
chr15	53472488	53472489	chr15:53472489:T:A	rs74015669	T	A	A	SOX2_HMG_3	-16	0	-	0	0	.
chr15	53521861	53521862	chr15:53521862:T:C	rs540546	T	C	T	SOX2_HMG_3	36	0	-	0	0	.
chr15	53539992	53539993	chr15:53539993:G:A	rs12915842	G	A	g	SOX2_HMG_3	1	1	-	7.691980099150265	7.691980099150265	GCTCAATAATATTGTGA
chr15	53808688	53808689	chr15:53808689:T:C	rs731380	T	C	T	SOX2_HMG_3	-12	0	+	0	0	.
chr15	53808701	53808702	chr15:53808702:G:A	rs731381	G	A	A	SOX2_HMG_3	1	1	+	3.490326209994523	5.321973800073815	CGGCAACGTCAGTGATG
chr15	53913011	53913012	chr15:53913012:T:C	rs2711623	T	C	T	SOX2_HMG_3	15	1	-	2.2834038980701186	1.8509303165192175	GAGCAATGTCAATGGAG
chr15	54153499	54153500	chr15:54153500:G:A	rs28416823	G	A	G	SOX2_HMG_3	11	1	+	3.207075763574726	-2.0685357654376713	TATCAAGATCAGTGACA
chr15	54256617	54256618	chr15:54256618:T:C	rs12908409	T	C	T	SOX2_HMG_3	29	0	+	0	0	.
chr15	54520545	54520546	chr15:54520546:A:G	rs28731017	A	G	A	SOX2_HMG_3	6	1	-	3.4009930910335764	-3.507761688281644	GAGCAATTAAATTCATG
chr15	54605275	54605276	chr15:54605276:A:C	chr15:54605276:A:C	A	C	g	SOX2_HMG_3	22	0	-	0	0	.
chr15	54605275	54605276	chr15:54605276:A:G	rs12708436	A	G	g	SOX2_HMG_3	22	0	-	0	0	.
chr15	55440331	55440332	chr15:55440332:T:G	rs7166763	T	G	T	SOX2_HMG_3	-15	0	+	0	0	.
chr15	55848188	55848189	chr15:55848189:G:A	rs3759865	G	A	G	SOX2_HMG_3	-8	0	-	0	0	.
chr15	55912137	55912138	chr15:55912138:A:G	rs140022173	A	G	A	SOX2_HMG_3	22	0	-	0	0	.
chr15	55914598	55914599	chr15:55914599:G:A	rs12592018	G	A	A	SOX2_HMG_3	36	0	+	0	0	.
chr15	55916336	55916337	chr15:55916337:G:A	rs12440230	G	A	G	SOX2_HMG_3	6	1	-	5.188105572370008	12.096860351685228	CAGCAACGGTAGTGATT
chr15	55950987	55950988	chr15:55950988:G:A	rs78248035	G	A	G	SOX2_HMG_3	-6	0	+	0	0	.
chr15	56052432	56052433	chr15:56052433:C:G	rs10518832	C	G	C	SOX2_HMG_3	17	0	+	0	0	.
chr15	56093669	56093670	chr15:56093670:A:G	rs33984059	A	G	A	SOX2_HMG_3	-7	0	+	0	0	.
chr15	56321098	56321099	chr15:56321099:G:A	rs2194942	G	A	A	SOX2_HMG_3	-7	0	+	0	0	.
chr15	56355475	56355476	chr15:56355476:C:G	rs12324006	C	G	C	SOX2_HMG_3	-3	0	-	0	0	.
chr15	56356974	56356975	chr15:56356975:G:C	rs2725866	G	C	G	SOX2_HMG_3	31	0	+	0	0	.
chr15	56586370	56586371	chr15:56586371:A:T	rs4309345	A	T	A	SOX2_HMG_3	28	0	-	0	0	.
chr15	56760070	56760071	chr15:56760071:G:T	rs1477475	G	T	G	SOX2_HMG_3	24	0	-	0	0	.
chr15	56892996	56892997	chr15:56892997:A:G	rs190185397	A	G	A	SOX2_HMG_3	36	0	+	0	0	.
chr15	56919444	56919445	chr15:56919445:A:G	rs28701090	A	G	A	SOX2_HMG_3	4	1	+	3.815141467597202	-3.0936133117180167	TGTCAGTTCTATTGTTG
chr15	56948561	56948562	chr15:56948562:A:C	rs4774902	A	C	A	SOX2_HMG_3	0	1	+	3.0469877573846733	2.5225151347586428	AGTGAATACCAGTGAAG
chr15	57090560	57090561	chr15:57090561:C:T	rs116915857	C	T	C	SOX2_HMG_3	33	0	+	0	0	.
chr15	57220804	57220805	chr15:57220805:T:A	rs2591062	T	A	T	SOX2_HMG_3	24	0	+	0	0	.
chr15	57288924	57288925	chr15:57288925:A:G	rs78738069	A	G	A	SOX2_HMG_3	-4	0	+	0	0	.
chr15	57410092	57410093	chr15:57410093:G:A	rs34487148	G	A	G	SOX2_HMG_3	-14	0	+	0	0	.
chr15	57463444	57463445	chr15:57463445:A:G	rs1280375	A	G	A	SOX2_HMG_3	2	1	-	2.9126997066030023	-2.0906723637125855	GGTCAATGTAGTTGTCG
chr15	57612627	57612628	chr15:57612628:T:C	rs12324526	T	C	T	SOX2_HMG_3	17	0	-	0	0	.
chr15	58064383	58064384	chr15:58064384:A:T	rs1003356234	A	T	A	SOX2_HMG_3	-7	0	+	0	0	.
chr15	58079483	58079484	chr15:58079484:G:A	rs2704188	G	A	A	SOX2_HMG_3	17	0	-	0	0	.
chr15	58399948	58399949	chr15:58399949:G:T	rs35128881	G	T	C	SOX2_HMG_3	-19	0	-	0	0	.
chr15	58535996	58535997	chr15:58535997:A:G	rs148076190	A	G	A	SOX2_HMG_3	-2	0	-	0	0	.
chr15	58546464	58546465	chr15:58546465:G:C	rs7181352	G	C	C	SOX2_HMG_3	31	0	+	0	0	.
chr15	58735471	58735472	chr15:58735472:T:C	rs394845	T	C	T	SOX2_HMG_3	5	1	-	3.197444980303428	-3.711309799011793	CATCAATGGATTTGGAT
chr15	58857200	58857201	chr15:58857201:G:A	rs1054991	G	A	G	SOX2_HMG_3	8	1	+	5.461593309391667	4.612549362028037	GTTCAATTGTATTAAAA
chr15	59125389	59125390	chr15:59125390:C:T	rs28383569	C	T	C	SOX2_HMG_3	7	1	-	2.874348573990323	0.14556145342898807	CAACAATGCATTTGAGA
chr15	59170597	59170598	chr15:59170598:C:A	rs12438396	C	A	C	SOX2_HMG_3	22	0	-	0	0	.
chr15	59170631	59170632	chr15:59170632:T:C	rs528312257	T	C	T	SOX2_HMG_3	-12	0	-	0	0	.
chr15	59704807	59704808	chr15:59704808:A:G	rs17191002	A	G	A	SOX2_HMG_3	28	0	-	0	0	.
chr15	59893032	59893033	chr15:59893033:C:T	rs11071494	C	T	C	SOX2_HMG_3	16	1	-	5.263017162763017	4.989329546372745	GGTCAATTCCAGTGCTG
chr15	60218782	60218783	chr15:60218783:T:G	rs143857439	T	G	T	SOX2_HMG_3	36	0	-	0	0	.
chr15	60395644	60395645	chr15:60395645:A:G	rs2100432	A	G	A	SOX2_HMG_3	22	0	-	0	0	.
chr15	60606269	60606270	chr15:60606270:A:G	rs17303062	A	G	A	SOX2_HMG_3	10	1	+	6.521653573005432	-0.38710120630978895	AGTAAATGCTATTGTTG
chr15	60844824	60844825	chr15:60844825:T:C	rs752879541	T	C	T	SOX2_HMG_3	29	0	+	0	0	.
chr15	60861351	60861352	chr15:60861352:T:C	rs10519085	T	C	T	SOX2_HMG_3	4	1	-	9.92416116893142	3.015406389616199	TATCAATGTAAGTGGTT
chr15	60932099	60932100	chr15:60932100:A:C	rs79995443	A	C	A	SOX2_HMG_3	-2	0	+	0	0	.
chr15	61083280	61083281	chr15:61083281:T:C	rs4775355	T	C	T	SOX2_HMG_3	-2	0	-	0	0	.
chr15	61155757	61155758	chr15:61155758:T:C	rs142237644	T	C	T	SOX2_HMG_3	-20	0	-	0	0	.
chr15	61479768	61479769	chr15:61479769:G:A	rs34601722	G	A	G	SOX2_HMG_3	19	0	+	0	0	.
chr15	61480351	61480352	chr15:61480352:T:G	rs56810547	T	G	T	SOX2_HMG_3	5	1	-	3.2570650864584536	-3.651689692856767	CAACAATGCTAGTCATC
chr15	61606422	61606423	chr15:61606423:A:G	rs8035133	A	G	A	SOX2_HMG_3	-8	0	-	0	0	.
chr15	61821719	61821720	chr15:61821720:T:C	rs11853774	T	C	T	SOX2_HMG_3	12	1	+	5.354699193952826	-1.554055585362395	ATTCAATGTCAATGTTA
chr15	62496082	62496083	chr15:62496083:A:C	rs761829855	A	C	A	SOX2_HMG_3	27	0	+	0	0	.
chr15	62638354	62638355	chr15:62638355:A:G	rs116525722	A	G	A	SOX2_HMG_3	25	0	+	0	0	.
chr15	62901863	62901864	chr15:62901864:G:A	rs8042820	G	A	A	SOX2_HMG_3	31	0	+	0	0	.
chr15	63195221	63195222	chr15:63195222:C:G	rs753891001	C	G	C	SOX2_HMG_3	-2	0	+	0	0	.
chr15	63251955	63251956	chr15:63251956:A:G	rs111247008	A	G	A	SOX2_HMG_3	34	0	-	0	0	.
chr15	63454652	63454653	chr15:63454653:A:T	rs11632615	A	T	A	SOX2_HMG_3	21	0	-	0	0	.
chr15	63834838	63834839	chr15:63834839:C:G	rs9972484	C	G	C	SOX2_HMG_3	20	0	-	0	0	.
chr15	63834844	63834845	chr15:63834845:T:C	rs6494438	T	C	C	SOX2_HMG_3	14	1	-	6.4234722028606175	2.2415945855594988	GGTCAGTTTAATTGATG
chr15	64232780	64232781	chr15:64232781:G:A	rs8033972	G	A	a	SOX2_HMG_3	13	1	+	4.327690999111713	-2.5810637802035075	ACTCAATGCCAGAGAAA
chr15	64248375	64248376	chr15:64248376:A:G	rs150730913	A	G	A	SOX2_HMG_3	9	1	-	5.998950073154327	5.192279939217282	TACCAATGTTATTAATA
chr15	64635589	64635590	chr15:64635590:G:A	rs117951680	G	A	G	SOX2_HMG_3	8	1	+	1.6428611020557566	0.7938171546921275	AGTCATTGGTTGTGATG
chr15	64948980	64948981	chr15:64948981:G:A	rs113564305	G	A	G	SOX2_HMG_3	-9	0	+	0	0	.
chr15	65218285	65218286	chr15:65218286:T:G	rs11071830	T	G	T	SOX2_HMG_3	17	0	+	0	0	.
chr15	65576153	65576154	chr15:65576154:T:C	rs541812485	T	C	T	SOX2_HMG_3	19	0	+	0	0	.
chr15	65596020	65596021	chr15:65596021:G:T	rs7165102	G	T	T	SOX2_HMG_3	3	1	-	6.72770689523305	-0.18104788408217054	AATCAATGACAGTTATC
chr15	65655285	65655286	chr15:65655286:T:C	chr15:65655286:T:C	T	C	T	SOX2_HMG_3	14	1	+	2.8746330174126844	-1.2448918433397143	GGACAATGCTATTTTTG
chr15	65798346	65798347	chr15:65798347:C:A	rs2727096	C	A	A	SOX2_HMG_3	20	0	-	0	0	.
chr15	65984015	65984016	chr15:65984016:C:T	rs11639031	C	T	C	SOX2_HMG_3	21	0	+	0	0	.
chr15	66069974	66069975	chr15:66069975:T:C	rs537926779	T	C	T	SOX2_HMG_3	31	0	+	0	0	.
chr15	66089746	66089747	chr15:66089747:A:G	rs11639467	A	G	A	SOX2_HMG_3	-20	0	+	0	0	.
chr15	66115344	66115345	chr15:66115345:A:G	rs12438373	A	G	G	SOX2_HMG_3	30	0	-	0	0	.
chr15	66154190	66154191	chr15:66154191:A:G	rs78470492	A	G	A	SOX2_HMG_3	15	1	+	3.481208036086061	3.0487344545351602	AGTAAATGATAGTGTAA
chr15	66154204	66154205	chr15:66154205:G:A	rs79394454	G	A	G	SOX2_HMG_3	29	0	+	0	0	.
chr15	66177651	66177652	chr15:66177652:C:T	rs1382052	C	T	C	SOX2_HMG_3	23	0	-	0	0	.
chr15	66180703	66180704	chr15:66180704:T:C	rs11858700	T	C	T	SOX2_HMG_3	5	1	-	5.924985204140453	-0.983769575174767	GATCAATAGAATGGAAA
chr15	66239592	66239593	chr15:66239593:A:G	rs12324491	A	G	G	SOX2_HMG_3	9	1	-	1.4186080629188556	0.6119379289818097	GACCACTGGTAGTGGTG
chr15	66438946	66438947	chr15:66438947:G:C	rs8036023	G	C	G	SOX2_HMG_3	5	1	+	7.316713444654255	7.316713444654255	AGTCAGTGGTAGTGAAG
chr15	66503598	66503599	chr15:66503599:C:T	rs28673176	C	T	C	SOX2_HMG_3	13	1	-	6.081525743332609	-0.8272290359826127	ATTTAATGGTATTGTTG
chr15	66559726	66559727	chr15:66559727:G:A	rs12442231	G	A	A	SOX2_HMG_3	25	0	-	0	0	.
chr15	66900941	66900942	chr15:66900942:G:A	rs3865016	G	A	G	SOX2_HMG_3	0	1	-	2.6872557682183333	2.549926790169669	CGGCATTGTCAGTGATT
chr15	67133235	67133236	chr15:67133236:T:A	rs10163132	T	A	T	SOX2_HMG_3	-11	0	-	0	0	.
chr15	67182744	67182745	chr15:67182745:C:T	rs10152566	C	T	C	SOX2_HMG_3	19	0	+	0	0	.
chr15	67214440	67214441	chr15:67214441:C:T	rs11855544	C	T	C	SOX2_HMG_3	1	1	-	4.004062828416248	5.835710418495539	TGTCAATAATACTGAGA
chr15	67565203	67565204	chr15:67565204:A:G	rs7182417	A	G	G	SOX2_HMG_3	32	0	-	0	0	.
chr15	67755557	67755558	chr15:67755558:G:C	rs770984207	G	C	G	SOX2_HMG_3	-11	0	-	0	0	.
chr15	67802543	67802544	chr15:67802544:C:T	rs111631060	C	T	C	SOX2_HMG_3	26	0	+	0	0	.
chr15	67808284	67808285	chr15:67808285:C:T	rs1871307	C	T	C	SOX2_HMG_3	-10	0	+	0	0	.
chr15	68277603	68277604	chr15:68277604:G:A	rs78238174	G	A	G	SOX2_HMG_3	-1	0	+	0	0	.
chr15	68313364	68313365	chr15:68313365:T:C	rs7174916	T	C	T	SOX2_HMG_3	21	0	-	0	0	.
chr15	68438021	68438022	chr15:68438022:G:A	rs4999936	G	A	G	SOX2_HMG_3	-9	0	+	0	0	.
chr15	68438045	68438046	chr15:68438046:A:G	rs920923	A	G	G	SOX2_HMG_3	15	1	+	2.5731269107451484	2.1406533291942473	AAGCCATGAAAGTGAAG
chr15	68438063	68438064	chr15:68438064:C:T	rs4999937	C	T	C	SOX2_HMG_3	33	0	+	0	0	.
chr15	68468176	68468177	chr15:68468177:A:G	rs2120865	A	G	A	SOX2_HMG_3	9	1	-	4.142631718260987	3.3359615843239414	AGTAAATATTATTGAAC
chr15	68578237	68578238	chr15:68578238:T:C	rs777808562	T	C	T	SOX2_HMG_3	12	1	+	3.4295433373959363	-3.479211441919284	ACTCAGTGGTAGTGTAG
chr15	68669599	68669600	chr15:68669600:G:A	rs4776416	G	A	G	SOX2_HMG_3	-6	0	-	0	0	.
chr15	68679878	68679879	chr15:68679879:C:T	rs12901895	C	T	C	SOX2_HMG_3	-17	0	-	0	0	.
chr15	68776430	68776431	chr15:68776431:A:G	chr15:68776431:A:G	A	G	A	SOX2_HMG_3	5	1	+	1.3585247388803348	-5.550230040434885	GATCAATGTCAGATAGG
chr15	68786003	68786004	chr15:68786004:A:T	rs139293860	A	T	A	SOX2_HMG_3	2	1	-	4.6199470485384	0.7523322138603584	CATCGATGGCATTGGGG
chr15	68786006	68786007	chr15:68786007:G:A	rs75960637	G	A	G	SOX2_HMG_3	-1	0	-	0	0	.
chr15	68907923	68907924	chr15:68907924:C:T	rs748681	C	T	C	SOX2_HMG_3	13	1	-	3.3591599895674955	-3.549594789747725	CATCTATGCTATCGATA
chr15	69100052	69100053	chr15:69100053:G:A	rs4777114	G	A	G	SOX2_HMG_3	28	0	-	0	0	.
chr15	69194701	69194702	chr15:69194702:G:A	rs8042958	G	A	g	SOX2_HMG_3	16	1	-	2.014905928671686	3.21167798181204	GATCAATGTTTTAGAAC
chr15	69238118	69238119	chr15:69238119:A:G	rs1503287	A	G	A	SOX2_HMG_3	5	1	+	4.472559532374065	-2.4361952469411543	TTTCAATGCTAGAGAAA
chr15	69469032	69469033	chr15:69469033:C:T	rs1404684573	C	T	C	SOX2_HMG_3	18	0	-	0	0	.
chr15	69751657	69751658	chr15:69751658:C:T	rs72745817	C	T	C	SOX2_HMG_3	-4	0	-	0	0	.
chr15	69759652	69759653	chr15:69759653:G:A	rs16953718	G	A	G	SOX2_HMG_3	-13	0	-	0	0	.
chr15	69784917	69784918	chr15:69784918:T:C	rs1470833	T	C	C	SOX2_HMG_3	-11	0	+	0	0	.
chr15	70046097	70046098	chr15:70046098:A:G	rs149835428	A	G	A	SOX2_HMG_3	-7	0	+	0	0	.
chr15	70102029	70102030	chr15:70102030:A:G	rs141766678	A	G	A	SOX2_HMG_3	-6	0	-	0	0	.
chr15	70116613	70116614	chr15:70116614:C:T	rs17759653	C	T	T	SOX2_HMG_3	32	0	+	0	0	.
chr15	70198286	70198287	chr15:70198287:C:T	rs10152596	C	T	C	SOX2_HMG_3	34	0	+	0	0	.
chr15	70328257	70328258	chr15:70328258:G:A	rs534593743	G	A	G	SOX2_HMG_3	19	0	+	0	0	.
chr15	70437850	70437851	chr15:70437851:G:A	rs139662466	G	A	G	SOX2_HMG_3	19	0	-	0	0	.
chr15	70494387	70494388	chr15:70494388:G:A	rs56179949	G	A	G	SOX2_HMG_3	-13	0	-	0	0	.
chr15	70524301	70524302	chr15:70524302:G:T	rs57962183	G	T	T	SOX2_HMG_3	24	0	-	0	0	.
chr15	70524302	70524303	chr15:70524303:C:T	rs4777294	C	T	C	SOX2_HMG_3	23	0	-	0	0	.
chr15	70539474	70539475	chr15:70539475:T:C	rs6494876	T	C	C	SOX2_HMG_3	1	1	-	5.127336861379287	3.295689271299996	GATCAACAGCAGTGAGA
chr15	70547023	70547024	chr15:70547024:C:T	rs72755440	C	T	C	SOX2_HMG_3	21	0	-	0	0	.
chr15	70614184	70614185	chr15:70614185:C:T	rs146108624	C	T	C	SOX2_HMG_3	-1	0	-	0	0	.
chr15	70720713	70720714	chr15:70720714:T:A	rs7164177	T	A	A	SOX2_HMG_3	-2	0	+	0	0	.
chr15	70741673	70741674	chr15:70741674:T:C	rs16954772	T	C	c	SOX2_HMG_3	15	1	+	3.105670160051643	0.2629610038747847	AATCAATGTTATTACTC
chr15	70767792	70767793	chr15:70767793:C:G	rs74021858	C	G	C	SOX2_HMG_3	33	0	+	0	0	.
chr15	71251635	71251636	chr15:71251636:T:C	rs4776542	T	C	T	SOX2_HMG_3	12	1	+	5.339216163844894	-1.5695386154703268	AATCCATAGCAGTGAAA
chr15	71581700	71581701	chr15:71581701:A:G	rs35875294	A	G	A	SOX2_HMG_3	-8	0	-	0	0	.
chr15	72201054	72201055	chr15:72201055:C:T	rs78020492	C	T	C	SOX2_HMG_3	29	0	+	0	0	.
chr15	72226676	72226677	chr15:72226677:T:C	rs8192373	T	C	T	SOX2_HMG_3	31	0	-	0	0	.
chr15	72588332	72588333	chr15:72588333:C:T	rs17753089	C	T	C	SOX2_HMG_3	-12	0	-	0	0	.
chr15	72964171	72964172	chr15:72964172:C:T	rs1839271	C	T	C	SOX2_HMG_3	27	0	-	0	0	.
chr15	73663080	73663081	chr15:73663081:A:T	rs533135057	A	T	A	SOX2_HMG_3	5	1	+	6.662155157273229	-0.24659962204199104	AATGAATTGAATTGAAG
chr15	73767736	73767737	chr15:73767737:T:A	rs17187323	T	A	T	SOX2_HMG_3	21	0	-	0	0	.
chr15	74007528	74007529	chr15:74007529:A:G	rs10162627	A	G	A	SOX2_HMG_3	11	1	-	2.1882144900265352	-4.5044770082058125	TATTTATGGCATTGAAG
chr15	74170603	74170604	chr15:74170604:G:A	rs147954787	G	A	G	SOX2_HMG_3	-11	0	+	0	0	.
chr15	74330336	74330337	chr15:74330337:G:A	rs1564782	G	A	G	SOX2_HMG_3	11	1	+	1.6962807408023601	-3.579330788210037	GGGCAAAGCCAGTGAGG
chr15	74504719	74504720	chr15:74504720:G:A	rs6495109	G	A	A	SOX2_HMG_3	13	1	+	2.566651425082567	-4.342103354232652	AGTCATTCTCATTGATG
chr15	74638060	74638061	chr15:74638061:A:G	rs75388839	A	G	A	SOX2_HMG_3	15	1	-	4.235984497815435	1.3932753416385764	CGGCAATGGTAGTGCTG
chr15	75051224	75051225	chr15:75051225:G:A	rs755868762	G	A	g	SOX2_HMG_3	-9	0	+	0	0	.
chr15	75106198	75106199	chr15:75106199:G:A	rs76707738	G	A	G	SOX2_HMG_3	-20	0	-	0	0	.
chr15	75145573	75145574	chr15:75145574:C:T	rs7181933	C	T	C	SOX2_HMG_3	-4	0	-	0	0	.
chr15	75629294	75629295	chr15:75629295:C:A	rs4886722	C	A	c	SOX2_HMG_3	-9	0	+	0	0	.
chr15	75667161	75667162	chr15:75667162:A:C	chr15:75667162:A:C	A	C	A	SOX2_HMG_3	0	1	-	3.939577014827291	4.821972894587278	TTTCAATGCCAGGGAAG
chr15	76057770	76057771	chr15:76057771:T:G	rs334930	T	G	G	SOX2_HMG_3	32	0	-	0	0	.
chr15	76398264	76398265	chr15:76398265:G:A	rs12907805	G	A	G	SOX2_HMG_3	-10	0	-	0	0	.
chr15	76433978	76433979	chr15:76433979:T:G	rs16968215	T	G	T	SOX2_HMG_3	11	1	+	3.846386636506998	2.429306667287049	TGTGAATGGCATTGTGA
chr15	76945638	76945639	chr15:76945639:T:C	rs117461637	T	C	T	SOX2_HMG_3	11	1	+	3.804071717178289	-2.8886197810540577	AAACATTTATATTGAAG
chr15	77145554	77145555	chr15:77145555:T:C	rs12917081	T	C	T	SOX2_HMG_3	26	0	-	0	0	.
chr15	77329310	77329311	chr15:77329311:A:T	rs75313686	A	T	A	SOX2_HMG_3	36	0	-	0	0	.
chr15	77440740	77440741	chr15:77440741:A:G	rs74026913	A	G	A	SOX2_HMG_3	6	1	-	6.63528435573928	-0.27347042357594015	GGGCAATGAAAGTGAGT
chr15	77682117	77682118	chr15:77682118:G:A	rs7178761	G	A	G	SOX2_HMG_3	12	1	-	1.8294760273959758	8.738230806711197	TGCCAATGGCATCGAGG
chr15	77908251	77908252	chr15:77908252:G:A	rs4325522	G	A	G	SOX2_HMG_3	27	0	-	0	0	.
chr15	77908294	77908295	chr15:77908295:C:T	rs146750594	C	T	C	SOX2_HMG_3	-16	0	-	0	0	.
chr15	77985843	77985844	chr15:77985844:A:G	rs12372950	A	G	A	SOX2_HMG_3	5	1	+	3.1133607100223086	-3.7953940692929105	GGGCAACGCCATTGAGG
chr15	78038575	78038576	chr15:78038576:G:A	rs28591625	G	A	G	SOX2_HMG_3	-8	0	+	0	0	.
chr15	78105803	78105804	chr15:78105804:G:A	rs10456	G	A	G	SOX2_HMG_3	30	0	-	0	0	.
chr15	78215275	78215276	chr15:78215276:G:A	rs118042195	G	A	G	SOX2_HMG_3	29	0	+	0	0	.
chr15	78267594	78267595	chr15:78267595:T:C	rs12442418	T	C	T	SOX2_HMG_3	-6	0	+	0	0	.
chr15	78294572	78294573	chr15:78294573:T:C	rs17480994	T	C	T	SOX2_HMG_3	-20	0	-	0	0	.
chr15	78358872	78358873	chr15:78358873:G:A	rs4887042	G	A	A	SOX2_HMG_3	13	1	+	5.82034434489832	-1.0884104344169003	GAAAAATGTTATTGAGT
chr15	78358892	78358893	chr15:78358893:C:T	rs4887043	C	T	T	SOX2_HMG_3	33	0	+	0	0	.
chr15	78487041	78487042	chr15:78487042:C:T	rs12904234	C	T	T	SOX2_HMG_3	-18	0	-	0	0	.
chr15	78740729	78740730	chr15:78740730:A:G	rs113991567	A	G	N	SOX2_HMG_3	1	1	+	3.948371291080156	2.116723701000866	GACCACTGATAGTGATT
chr15	78860676	78860677	chr15:78860677:C:G	rs188638152	C	G	C	SOX2_HMG_3	6	1	+	2.1469656277328286	2.1469656277328286	CATCAACGGTAGTAATT
chr15	79012127	79012128	chr15:79012128:G:A	rs8025124	G	A	A	SOX2_HMG_3	26	0	-	0	0	.
chr15	79018201	79018202	chr15:79018202:A:G	rs11855058	A	G	G	SOX2_HMG_3	19	0	+	0	0	.
chr15	79035885	79035886	chr15:79035886:A:C	rs143592797	A	C	A	SOX2_HMG_3	5	1	+	1.5704040413459417	-5.338350737969279	AATCAAAGTCAGAGAAG
chr15	79096950	79096951	chr15:79096951:C:T	rs78496982	C	T	C	SOX2_HMG_3	0	1	+	6.430834014892894	6.29350503684423	CATAAATGGAATTGTTA
chr15	79118367	79118368	chr15:79118368:T:C	rs2102999	T	C	C	SOX2_HMG_3	6	1	+	3.2536075984935606	-3.655147180821658	GATGAATGGACTTGATG
chr15	79547568	79547569	chr15:79547569:C:T	rs7181421	C	T	C	SOX2_HMG_3	20	0	-	0	0	.
chr15	79609525	79609526	chr15:79609526:T:C	rs16971151	T	C	C	SOX2_HMG_3	23	0	+	0	0	.
chr15	79894882	79894883	chr15:79894883:G:A	rs4573897	G	A	G	SOX2_HMG_3	35	0	-	0	0	.
chr15	79968529	79968530	chr15:79968530:G:A	rs67760360	G	A	G	SOX2_HMG_3	30	0	-	0	0	.
chr15	80058826	80058827	chr15:80058827:T:C	rs2461649	T	C	C	SOX2_HMG_3	23	0	-	0	0	.
chr15	80172326	80172327	chr15:80172327:A:G	rs7180031	A	G	A	SOX2_HMG_3	23	0	+	0	0	.
chr15	80193821	80193822	chr15:80193822:T:A	rs1437222	T	A	A	SOX2_HMG_3	21	0	+	0	0	.
chr15	80484251	80484252	chr15:80484252:A:G	rs61144989	A	G	G	SOX2_HMG_3	-12	0	-	0	0	.
chr15	80532847	80532848	chr15:80532848:C:G	rs112404997	C	G	C	SOX2_HMG_3	35	0	+	0	0	.
chr15	80811445	80811446	chr15:80811446:A:G	rs73497055	A	G	A	SOX2_HMG_3	33	0	+	0	0	.
chr15	80867920	80867921	chr15:80867921:G:A	rs4145805	G	A	G	SOX2_HMG_3	-11	0	+	0	0	.
chr15	81000242	81000243	chr15:81000243:A:G	rs144166198	A	G	A	SOX2_HMG_3	19	0	+	0	0	.
chr15	81089646	81089647	chr15:81089647:A:G	rs868954	A	G	A	SOX2_HMG_3	5	1	+	7.567051399552103	0.658296620236882	AGTCAATGCTTTTGAGG
chr15	81184646	81184647	chr15:81184647:C:T	rs1509557	C	T	C	SOX2_HMG_3	32	0	-	0	0	.
chr15	81185330	81185331	chr15:81185331:T:C	rs17337055	T	C	T	SOX2_HMG_3	15	1	-	3.4031997192717793	2.9707261377208787	AAGCAATGAAAATGAAT
chr15	81318560	81318561	chr15:81318561:T:C	rs4617815	T	C	C	SOX2_HMG_3	11	1	+	2.7990979273992314	-3.8935935708331155	GGTCACTGCCATTGGGG
chr15	81335386	81335387	chr15:81335387:A:G	rs61112061	A	G	A	SOX2_HMG_3	5	1	+	9.509700180337635	2.600945401022413	GGACAATGCTATTGTTA
chr15	81335393	81335394	chr15:81335394:T:C	rs116750573	T	C	T	SOX2_HMG_3	12	1	+	9.509700180337635	2.600945401022413	GGACAATGCTATTGTTA
chr15	81338447	81338448	chr15:81338448:C:T	rs140831072	C	T	C	SOX2_HMG_3	35	0	+	0	0	.
chr15	81401428	81401429	chr15:81401429:G:A	rs115681804	G	A	G	SOX2_HMG_3	-6	0	-	0	0	.
chr15	81410479	81410480	chr15:81410480:G:T	rs967376194	G	T	G	SOX2_HMG_3	26	0	-	0	0	.
chr15	81410511	81410512	chr15:81410512:C:G	rs12101997	C	G	C	SOX2_HMG_3	-6	0	-	0	0	.
chr15	81752189	81752190	chr15:81752190:A:G	rs16973117	A	G	A	SOX2_HMG_3	28	0	-	0	0	.
chr15	81754789	81754790	chr15:81754790:C:T	rs7167606	C	T	C	SOX2_HMG_3	22	0	+	0	0	.
chr15	81930865	81930866	chr15:81930866:C:G	rs12437922	C	G	C	SOX2_HMG_3	26	0	-	0	0	.
chr15	82083020	82083021	chr15:82083021:T:C	rs76698881	T	C	T	SOX2_HMG_3	8	1	+	6.837101600052819	5.965365247416956	GTTGAATGTCATTGAAA
chr15	82085533	82085534	chr15:82085534:A:G	rs2665089	A	G	G	SOX2_HMG_3	6	1	+	7.856123981940622	7.856123981940622	GATCAAAGGCAGTGAGA
chr15	82095609	82095610	chr15:82095610:G:C	rs1969090	G	C	C	SOX2_HMG_3	14	1	-	4.4580304539974875	7.108451542263062	TAACAATGTCAGTGCTT
chr15	82133523	82133524	chr15:82133524:A:G	rs66904072	A	G	A	SOX2_HMG_3	-16	0	+	0	0	.
chr15	82136255	82136256	chr15:82136256:C:A	rs77541858	C	A	C	SOX2_HMG_3	-10	0	+	0	0	.
chr15	82179984	82179985	chr15:82179985:C:T	rs8041868	C	T	T	SOX2_HMG_3	11	1	-	5.702622340031074	0.4270108110186759	AGTCAATGTTAGTTTTA
chr15	82198294	82198295	chr15:82198295:C:T	chr15:82198295:C:T	C	T	C	SOX2_HMG_3	-16	0	+	0	0	.
chr15	82391613	82391614	chr15:82391614:C:T	rs35884609	C	T	N	SOX2_HMG_3	-12	0	+	0	0	.
chr15	83286783	83286784	chr15:83286784:A:G	rs55893521	A	G	A	SOX2_HMG_3	-7	0	-	0	0	.
chr15	83435455	83435456	chr15:83435456:G:A	rs185152378	G	A	G	SOX2_HMG_3	11	1	+	2.7248578891054613	-2.5507536399069366	GAACAGTGCCAGTGAGT
chr15	83517135	83517136	chr15:83517136:G:A	rs11636510	G	A	G	SOX2_HMG_3	-10	0	-	0	0	.
chr15	83733444	83733445	chr15:83733445:A:G	rs10162825	A	G	A	SOX2_HMG_3	-6	0	+	0	0	.
chr15	83978229	83978230	chr15:83978230:T:C	rs881984	T	C	C	SOX2_HMG_3	-15	0	+	0	0	.
chr15	84630409	84630410	chr15:84630410:A:G	rs73449310	A	G	A	SOX2_HMG_3	-13	0	+	0	0	.
chr15	84714367	84714368	chr15:84714368:G:A	rs34900908	G	A	G	SOX2_HMG_3	-4	0	-	0	0	.
chr15	84853035	84853036	chr15:84853036:T:G	chr15:84853036:T:G	T	G	T	SOX2_HMG_3	4	1	-	3.9822579749091425	-2.926496804406079	CCTCAGTTCTATTGAAA
chr15	84853039	84853040	chr15:84853040:G:C	chr15:84853040:G:C	G	C	G	SOX2_HMG_3	0	1	-	3.9822579749091425	4.727324876620465	CCTCAGTTCTATTGAAA
chr15	84888334	84888335	chr15:84888335:C:T	rs34886124	C	T	C	SOX2_HMG_3	22	0	-	0	0	.
chr15	84905253	84905254	chr15:84905254:C:A	rs17536553	C	A	C	SOX2_HMG_3	18	0	+	0	0	.
chr15	84905270	84905271	chr15:84905271:A:G	rs8033895	A	G	G	SOX2_HMG_3	35	0	+	0	0	.
chr15	85094682	85094683	chr15:85094683:T:C	rs55699332	T	C	T	SOX2_HMG_3	33	0	-	0	0	.
chr15	85354590	85354591	chr15:85354591:T:C	rs72748866	T	C	T	SOX2_HMG_3	31	0	-	0	0	.
chr15	85354623	85354624	chr15:85354624:C:T	rs41465044	C	T	C	SOX2_HMG_3	-2	0	-	0	0	.
chr15	85379357	85379358	chr15:85379358:G:C	rs7496211	G	C	G	SOX2_HMG_3	-6	0	+	0	0	.
chr15	85379384	85379385	chr15:85379385:T:G	rs12595503	T	G	T	SOX2_HMG_3	21	0	+	0	0	.
chr15	85383314	85383315	chr15:85383315:C:T	rs7180683	C	T	C	SOX2_HMG_3	16	1	-	9.221645455657553	8.947957839267282	AGTCAATGGAAGTGTGG
chr15	85430466	85430467	chr15:85430467:T:C	rs11856991	T	C	T	SOX2_HMG_3	29	0	+	0	0	.
chr15	85463759	85463760	chr15:85463760:G:A	rs146913781	G	A	G	SOX2_HMG_3	36	0	+	0	0	.
chr15	85579738	85579739	chr15:85579739:T:C	rs17557307	T	C	T	SOX2_HMG_3	-3	0	-	0	0	.
chr15	85626119	85626120	chr15:85626120:A:G	rs71397886	A	G	A	SOX2_HMG_3	6	1	-	4.677536264510436	-2.2312185148047856	GGTCAATGTCATTAACC
chr15	85724065	85724066	chr15:85724066:G:T	rs10852054	G	T	T	SOX2_HMG_3	-13	0	-	0	0	.
chr15	85746980	85746981	chr15:85746981:G:T	rs34121119	G	T	T	SOX2_HMG_3	14	1	+	3.3439346913439696	4.813038463830795	CATCAATGTTAGAGGGT
chr15	85780519	85780520	chr15:85780520:G:A	rs72751891	G	A	G	SOX2_HMG_3	23	0	-	0	0	.
chr15	85780545	85780546	chr15:85780546:C:T	rs60635633	C	T	C	SOX2_HMG_3	-3	0	-	0	0	.
chr15	85782892	85782893	chr15:85782893:A:C	rs12916187	A	C	A	SOX2_HMG_3	6	1	-	3.8169021578209197	-3.0918526214943	GAACAATGTCCTTGAGC
chr15	85829105	85829106	chr15:85829106:C:T	rs182587458	C	T	C	SOX2_HMG_3	23	0	+	0	0	.
chr15	86731948	86731949	chr15:86731949:G:A	rs1869184	G	A	G	SOX2_HMG_3	24	0	-	0	0	.
chr15	86783103	86783104	chr15:86783104:T:A	rs16977979	T	A	T	SOX2_HMG_3	-19	0	-	0	0	.
chr15	86886255	86886256	chr15:86886256:G:T	rs766230	G	T	G	SOX2_HMG_3	26	0	-	0	0	.
chr15	87269505	87269506	chr15:87269506:T:C	rs1499738	T	C	C	SOX2_HMG_3	36	0	+	0	0	.
chr15	87827359	87827360	chr15:87827360:T:C	rs1006113640	T	C	T	SOX2_HMG_3	23	0	+	0	0	.
chr15	88367585	88367586	chr15:88367586:T:C	rs17186688	T	C	T	SOX2_HMG_3	11	1	+	2.9985851954298814	-3.694106302802464	GGGAAATGACATTGAGG
chr15	88386694	88386695	chr15:88386695:T:A	rs16941772	T	A	T	SOX2_HMG_3	10	1	-	2.018981919142847	-4.889772860172371	GGACAATTGCACTGAGG
chr15	88422749	88422750	chr15:88422750:T:C	chr15:88422750:T:C	T	C	T	SOX2_HMG_3	5	1	-	1.5300329728727449	-5.378721806442474	AGTCCATGTTGTTGAGG
chr15	88467690	88467691	chr15:88467691:G:A	rs200957603	G	A	G	SOX2_HMG_3	-13	0	+	0	0	.
chr15	88728209	88728210	chr15:88728210:A:G	rs77659506	A	G	A	SOX2_HMG_3	1	1	+	3.9952716941508046	2.1636241040715136	TAACATTGGAAGTGATG
chr15	89071898	89071899	chr15:89071899:A:G	rs9920084	A	G	G	SOX2_HMG_3	18	0	+	0	0	.
chr15	89675930	89675931	chr15:89675931:C:T	rs80350711	C	T	T	SOX2_HMG_3	18	0	+	0	0	.
chr15	89898336	89898337	chr15:89898337:C:A	rs8033554	C	A	C	SOX2_HMG_3	23	0	+	0	0	.
chr15	90061030	90061031	chr15:90061031:T:C	rs7167755	T	C	C	SOX2_HMG_3	30	0	-	0	0	.
chr15	90105293	90105294	chr15:90105294:C:T	rs11073900	C	T	C	SOX2_HMG_3	25	0	+	0	0	.
chr15	90324348	90324349	chr15:90324349:C:T	rs74251746	C	T	C	SOX2_HMG_3	-12	0	+	0	0	.
chr15	90348382	90348383	chr15:90348383:G:A	rs6496665	G	A	G	SOX2_HMG_3	25	0	+	0	0	.
chr15	90419393	90419394	chr15:90419394:C:T	rs2526000	C	T	T	SOX2_HMG_3	27	0	+	0	0	.
chr15	90743725	90743726	chr15:90743726:C:T	rs76838462	C	T	C	SOX2_HMG_3	12	1	+	5.089857862242339	11.99861264155756	CAACAATTGTATCGATA
chr15	90766244	90766245	chr15:90766245:G:A	rs3784780	G	A	.	SOX2_HMG_3	20	0	-	0	0	.
chr15	90788315	90788316	chr15:90788316:G:A	rs7175811	G	A	A	SOX2_HMG_3	23	0	-	0	0	.
chr15	90932043	90932044	chr15:90932044:G:A	rs34967259	G	A	G	SOX2_HMG_3	-19	0	+	0	0	.
chr15	91051724	91051725	chr15:91051725:C:T	rs6496755	C	T	c	SOX2_HMG_3	13	1	-	3.9138209324689512	-2.9949338468462683	GAACAATGGTAATGGTA
chr15	91184406	91184407	chr15:91184407:A:G	rs4322639	A	G	G	SOX2_HMG_3	31	0	+	0	0	.
chr15	91376975	91376976	chr15:91376976:T:C	rs7174162	T	C	T	SOX2_HMG_3	6	1	+	2.904694574133843	-4.004060205181377	AAACTATGGCATTGTAA
chr15	91472258	91472259	chr15:91472259:C:T	rs4374149	C	T	T	SOX2_HMG_3	-1	0	-	0	0	.
chr15	91536802	91536803	chr15:91536803:A:C	rs1323925117	A	C	A	SOX2_HMG_3	33	0	-	0	0	.
chr15	91738802	91738803	chr15:91738803:C:T	rs71411108	C	T	C	SOX2_HMG_3	-12	0	-	0	0	.
chr15	92128025	92128026	chr15:92128026:A:G	rs2190750	A	G	A	SOX2_HMG_3	1	1	+	12.224132324479607	10.392484734400316	CATCAATACCAGTGATA
chr15	92199516	92199517	chr15:92199517:C:G	rs7174969	C	G	G	SOX2_HMG_3	28	0	+	0	0	.
chr15	92294815	92294816	chr15:92294816:A:G	rs8025981	A	G	G	SOX2_HMG_3	-19	0	+	0	0	.
chr15	92294865	92294866	chr15:92294866:T:C	rs8030602	T	C	T	SOX2_HMG_3	31	0	+	0	0	.
chr15	92326060	92326061	chr15:92326061:A:T	rs7171546	A	T	A	SOX2_HMG_3	-16	0	+	0	0	.
chr15	92469326	92469327	chr15:92469327:C:T	rs17522085	C	T	G	SOX2_HMG_3	20	0	-	0	0	.
chr15	92546108	92546109	chr15:92546109:C:T	rs1378599	C	T	T	SOX2_HMG_3	-12	0	-	0	0	.
chr15	92575135	92575136	chr15:92575136:T:A	rs417297	T	A	T	SOX2_HMG_3	-2	0	-	0	0	.
chr15	92724105	92724106	chr15:92724106:C:T	rs2387916	C	T	c	SOX2_HMG_3	-10	0	+	0	0	.
chr15	92725925	92725926	chr15:92725926:G:C	rs8041556	G	C	c	SOX2_HMG_3	-5	0	+	0	0	.
chr15	93088161	93088162	chr15:93088162:T:C	rs117006841	T	C	T	SOX2_HMG_3	34	0	-	0	0	.
chr15	93088169	93088170	chr15:93088170:A:T	rs62045493	A	T	A	SOX2_HMG_3	26	0	-	0	0	.
chr15	93088176	93088177	chr15:93088177:C:G	rs112306026	C	G	C	SOX2_HMG_3	19	0	-	0	0	.
chr15	93088211	93088212	chr15:93088212:T:C	rs73460353	T	C	T	SOX2_HMG_3	-16	0	-	0	0	.
chr15	93193644	93193645	chr15:93193645:T:G	rs6416581	T	G	G	SOX2_HMG_3	-12	0	+	0	0	.
chr15	93250323	93250324	chr15:93250324:T:C	rs936677	T	C	C	SOX2_HMG_3	11	1	+	7.596638081897194	0.9039465836648466	GATCAATTTGATTGTTA
chr15	93284868	93284869	chr15:93284869:C:T	rs4777643	C	T	C	SOX2_HMG_3	-16	0	+	0	0	.
chr15	93317919	93317920	chr15:93317920:G:T	rs74029345	G	T	G	SOX2_HMG_3	25	0	+	0	0	.
chr15	93467842	93467843	chr15:93467843:A:G	rs56858454	A	G	A	SOX2_HMG_3	-3	0	-	0	0	.
chr15	93546627	93546628	chr15:93546628:A:G	rs2130111	A	G	A	SOX2_HMG_3	5	1	+	2.5883206014425606	-4.32043417787266	TGTCAATGACAGTCACT
chr15	93612937	93612938	chr15:93612938:G:A	rs62025902	G	A	G	SOX2_HMG_3	8	1	-	2.3286730049331332	3.200409357568996	AATCAAGTCTACTGATG
chr15	93849026	93849027	chr15:93849027:C:A	rs566627940	C	A	C	SOX2_HMG_3	9	1	+	3.6673115087833708	2.615406300773688	TGTCAATTTCAGTTAAA
chr15	93861131	93861132	chr15:93861132:C:T	rs34819625	C	T	C	SOX2_HMG_3	13	1	-	2.9023940963405286	-4.006360682974692	AGTCAATGGCAGCGACC
chr15	93896212	93896213	chr15:93896213:C:T	rs574467444	C	T	C	SOX2_HMG_3	-18	0	-	0	0	.
chr15	94103001	94103002	chr15:94103002:A:G	rs59960604	A	G	G	SOX2_HMG_3	36	0	-	0	0	.
chr15	94369754	94369755	chr15:94369755:G:A	rs3784654	G	A	G	SOX2_HMG_3	-12	0	+	0	0	.
chr15	94606108	94606109	chr15:94606109:C:T	rs80135573	C	T	C	SOX2_HMG_3	32	0	+	0	0	.
chr15	94610090	94610091	chr15:94610091:C:G	rs4353444	C	G	G	SOX2_HMG_3	30	0	+	0	0	.
chr15	94750648	94750649	chr15:94750649:T:C	rs8030354	T	C	C	SOX2_HMG_3	-11	0	+	0	0	.
chr15	94889271	94889272	chr15:94889272:A:C	rs4372639	A	C	C	SOX2_HMG_3	-16	0	-	0	0	.
chr15	95076076	95076077	chr15:95076077:C:T	rs59059558	C	T	C	SOX2_HMG_3	-11	0	+	0	0	.
chr15	95076113	95076114	chr15:95076114:C:T	rs57534978	C	T	T	SOX2_HMG_3	26	0	+	0	0	.
chr15	95087684	95087685	chr15:95087685:G:C	rs73459904	G	C	C	SOX2_HMG_3	36	0	-	0	0	.
chr15	95346950	95346951	chr15:95346951:A:G	rs149707380	A	G	A	SOX2_HMG_3	5	1	-	4.122574243534331	4.122574243534331	TCTCATTGCAAGTGATG
chr15	95598637	95598638	chr15:95598638:G:A	rs10520789	G	A	G	SOX2_HMG_3	-20	0	-	0	0	.
chr15	95608684	95608685	chr15:95608685:C:T	rs10520792	C	T	C	SOX2_HMG_3	-10	0	-	0	0	.
chr15	95654027	95654028	chr15:95654028:T:C	rs8040452	T	C	C	SOX2_HMG_3	30	0	-	0	0	.
chr15	96234697	96234698	chr15:96234698:C:G	rs2577020	C	G	C	SOX2_HMG_3	13	1	-	3.5575907780278175	-3.351164001287403	CAACAATGCTATCGACA
chr15	96327587	96327588	chr15:96327588:A:G	rs3743462	A	G	A	SOX2_HMG_3	-16	0	-	0	0	.
chr15	96410861	96410862	chr15:96410862:G:A	rs7170620	G	A	A	SOX2_HMG_3	33	0	-	0	0	.
chr15	96786535	96786536	chr15:96786536:T:C	rs28506996	T	C	C	SOX2_HMG_3	21	0	-	0	0	.
chr15	97170535	97170536	chr15:97170536:G:A	rs2045325	G	A	G	SOX2_HMG_3	-4	0	+	0	0	.
chr15	97655095	97655096	chr15:97655096:T:C	rs78723158	T	C	T	SOX2_HMG_3	10	1	-	5.833498059320458	-1.0752567199947618	GATCAATAGCAGTTAAG
chr15	97692127	97692128	chr15:97692128:C:T	rs78717104	C	T	C	SOX2_HMG_3	34	0	+	0	0	.
chr15	97898759	97898760	chr15:97898760:A:T	rs7183584	A	T	T	SOX2_HMG_3	10	1	+	3.14170115714311	-3.7670536221721096	GACCCATGACAGTGATT
chr15	97959816	97959817	chr15:97959817:C:G	rs571438958	C	G	C	SOX2_HMG_3	3	1	+	2.992559372918145	-3.916195406397075	CATCAAGGCAATTGGAA
chr15	97959820	97959821	chr15:97959821:G:C	rs576567504	G	C	G	SOX2_HMG_3	7	1	+	2.992559372918145	-3.740282838517829	CATCAAGGCAATTGGAA
chr15	97959848	97959849	chr15:97959849:A:C	rs74646659	A	C	C	SOX2_HMG_3	35	0	+	0	0	.
chr15	97993827	97993828	chr15:97993828:C:A	rs902623	C	A	A	SOX2_HMG_3	32	0	+	0	0	.
chr15	97993828	97993829	chr15:97993829:A:G	rs902624	A	G	G	SOX2_HMG_3	33	0	+	0	0	.
chr15	98019099	98019100	chr15:98019100:C:T	rs146033414	C	T	A	SOX2_HMG_3	33	0	-	0	0	.
chr15	98019100	98019101	chr15:98019101:G:A	rs62023746	G	A	G	SOX2_HMG_3	32	0	-	0	0	.
chr15	98127693	98127694	chr15:98127694:C:T	rs28449535	C	T	T	SOX2_HMG_3	20	0	-	0	0	.
chr15	98139056	98139057	chr15:98139057:A:T	rs4965464	A	T	T	SOX2_HMG_3	10	1	+	2.6721283568887344	-4.236626422426487	CATCAATGGCAGTTTGC
chr15	98139063	98139064	chr15:98139064:G:A	rs7166587	G	A	G	SOX2_HMG_3	17	0	+	0	0	.
chr15	98155622	98155623	chr15:98155623:C:T	rs55869720	C	T	C	SOX2_HMG_3	-12	0	+	0	0	.
chr15	98188022	98188023	chr15:98188023:T:C	rs58670281	T	C	T	SOX2_HMG_3	2	1	+	3.2975567573417726	-1.7058153129738143	GATAAATGCCATGGATA
chr15	98323421	98323422	chr15:98323422:C:A	rs2120027	C	A	A	SOX2_HMG_3	0	1	+	2.9132848007539938	3.437757423380024	CGTCAATTCGATTGTAA
chr15	98520175	98520176	chr15:98520176:A:G	rs7176797	A	G	A	SOX2_HMG_3	29	0	-	0	0	.
chr15	98661253	98661254	chr15:98661254:T:C	rs6598539	T	C	C	SOX2_HMG_3	-8	0	-	0	0	.
chr15	98767861	98767862	chr15:98767862:A:G	rs72769824	A	G	G	SOX2_HMG_3	34	0	-	0	0	.
chr15	98767897	98767898	chr15:98767898:A:C	rs12905037	A	C	A	SOX2_HMG_3	-2	0	-	0	0	.
chr15	99043100	99043101	chr15:99043101:T:C	rs2593043	T	C	C	SOX2_HMG_3	32	0	+	0	0	.
chr15	99093974	99093975	chr15:99093975:C:T	rs1627542	C	T	C	SOX2_HMG_3	-14	0	+	0	0	.
chr15	99143359	99143360	chr15:99143360:C:G	rs55752512	C	G	C	SOX2_HMG_3	11	1	-	2.8330314273975534	-2.4425801016148445	TGTCAATGCCTGTGTTT
chr15	99159195	99159196	chr15:99159196:G:A	rs181102824	G	A	G	SOX2_HMG_3	-4	0	-	0	0	.
chr15	99341249	99341250	chr15:99341250:A:C	rs3851679	A	C	C	SOX2_HMG_3	2	1	-	2.6721283568887326	-1.1954864777893088	CATCCATGGCAGTGTGC
chr15	99395755	99395756	chr15:99395756:G:A	rs57643757	G	A	A	SOX2_HMG_3	22	0	-	0	0	.
chr15	99486056	99486057	chr15:99486057:C:G	rs920657	C	G	G	SOX2_HMG_3	9	1	+	2.128754322353262	-3.503925914809789	GGGAAATGCCAGTGAAG
chr15	99712102	99712103	chr15:99712103:T:G	rs60066240	T	G	T	SOX2_HMG_3	18	0	-	0	0	.
chr15	99762987	99762988	chr15:99762988:T:C	rs2958986	T	C	C	SOX2_HMG_3	27	0	+	0	0	.
chr15	99790963	99790964	chr15:99790964:T:C	rs1060458	T	C	T	SOX2_HMG_3	25	0	-	0	0	.
chr15	99959159	99959160	chr15:99959160:A:G	rs745104	A	G	G	SOX2_HMG_3	-19	0	-	0	0	.
chr15	99963798	99963799	chr15:99963799:G:C	rs55920749	G	C	g	SOX2_HMG_3	-18	0	+	0	0	.
chr15	99963808	99963809	chr15:99963809:A:C	rs56103220	A	C	A	SOX2_HMG_3	-8	0	+	0	0	.
chr15	99967041	99967042	chr15:99967042:T:C	rs2727172	T	C	T	SOX2_HMG_3	1	1	-	5.870917108818756	4.039269518739466	CAACATTGCTATTGATT
chr15	99992661	99992662	chr15:99992662:C:T	rs2573606	C	T	T	SOX2_HMG_3	-4	0	+	0	0	.
chr15	100079677	100079678	chr15:100079678:C:G	rs10152483	C	G	G	SOX2_HMG_3	30	0	-	0	0	.
chr15	100283543	100283544	chr15:100283544:C:G	rs4965626	C	G	G	SOX2_HMG_3	-6	0	+	0	0	.
chr15	100283564	100283565	chr15:100283565:T:C	rs4965303	T	C	T	SOX2_HMG_3	15	1	+	3.3334419593655817	0.4907328031887237	TCTCAAAGTCAGTGTTG
chr15	100372102	100372103	chr15:100372103:A:T	rs12439237	A	T	T	SOX2_HMG_3	-5	0	-	0	0	.
chr15	100517928	100517929	chr15:100517929:C:G	rs11247215	C	G	C	SOX2_HMG_3	-9	0	+	0	0	.
chr15	100534211	100534212	chr15:100534212:A:G	rs535128390	A	G	A	SOX2_HMG_3	36	0	-	0	0	.
chr15	100566624	100566625	chr15:100566625:A:T	rs11630819	A	T	A	SOX2_HMG_3	-5	0	+	0	0	.
chr15	100795273	100795274	chr15:100795274:C:T	rs8036060	C	T	T	SOX2_HMG_3	11	1	-	2.3278675417726524	-2.947743987239746	ACTCACTGTCAGTGTGG
chr15	100850080	100850081	chr15:100850081:A:G	rs28621749	A	G	a	SOX2_HMG_3	11	1	-	7.426789217220866	0.7340977189885176	GTTCAATGTCATTGGCT
chr15	100850100	100850101	chr15:100850101:A:G	rs115302369	A	G	A	SOX2_HMG_3	-9	0	-	0	0	.
chr15	100968601	100968602	chr15:100968602:T:A	rs4965748	T	A	T	SOX2_HMG_3	-11	0	-	0	0	.
chr15	101011663	101011664	chr15:101011664:T:A	rs6598413	T	A	A	SOX2_HMG_3	2	1	-	2.481260879309996	6.348875713988038	TGATAATGCCAGTGATG
chr15	101011832	101011833	chr15:101011833:C:T	rs79387719	C	T	C	SOX2_HMG_3	-5	0	+	0	0	.
chr15	101192277	101192278	chr15:101192278:T:G	rs908527707	T	G	T	SOX2_HMG_3	-10	0	+	0	0	.
chr15	101370305	101370306	chr15:101370306:A:C	rs2073591	A	C	C	SOX2_HMG_3	21	0	+	0	0	.
chr15	101500612	101500613	chr15:101500613:A:G	rs2898886	A	G	A	SOX2_HMG_3	10	1	+	6.08698038990163	-0.8217743894135905	CAGCAATGCTACTGATT
chr15	101539650	101539651	chr15:101539651:G:A	rs62028865	G	A	G	SOX2_HMG_3	-13	0	+	0	0	.
chr15	101552591	101552592	chr15:101552592:C:G	rs11638504	C	G	C	SOX2_HMG_3	29	0	-	0	0	.
chr16	424216	424217	chr16:424217:C:T	rs74328830	C	T	C	SOX2_HMG_3	35	0	-	0	0	.
chr16	630808	630809	chr16:630809:C:G	rs4984904	C	G	G	SOX2_HMG_3	-17	0	-	0	0	.
chr16	642315	642316	chr16:642316:G:A	rs149842174	G	A	G	SOX2_HMG_3	-14	0	+	0	0	.
chr16	1064257	1064258	chr16:1064258:A:G	rs213658	A	G	A	SOX2_HMG_3	23	0	-	0	0	.
chr16	1137732	1137733	chr16:1137733:G:A	rs117540024	G	A	G	SOX2_HMG_3	-17	0	-	0	0	.
chr16	1140654	1140655	chr16:1140655:T:C	rs8044890	T	C	C	SOX2_HMG_3	-15	0	-	0	0	.
chr16	1205057	1205058	chr16:1205058:T:G	rs8052049	T	G	G	SOX2_HMG_3	12	1	+	0.4867883862444716	-6.421966393070749	GATCAGTGCCGGTGAGG
chr16	1559538	1559539	chr16:1559539:G:A	rs115679100	G	A	G	SOX2_HMG_3	18	0	-	0	0	.
chr16	1703427	1703428	chr16:1703428:T:C	rs6600163	T	C	C	SOX2_HMG_3	12	1	+	7.8970575939899526	0.9883028146747312	AATCAATTGAGTTGATG
chr16	2407498	2407499	chr16:2407499:G:T	rs66496842	G	T	-	SOX2_HMG_3	-16	0	+	0	0	.
chr16	2668215	2668216	chr16:2668216:T:C	rs11643554	T	C	t	SOX2_HMG_3	-4	0	+	0	0	.
chr16	2679932	2679933	chr16:2679933:G:C	rs112436312	G	C	N	SOX2_HMG_3	27	0	+	0	0	.
chr16	2835677	2835678	chr16:2835678:A:G	rs75106776	A	G	A	SOX2_HMG_3	34	0	-	0	0	.
chr16	2835692	2835693	chr16:2835693:A:G	rs76693058	A	G	A	SOX2_HMG_3	19	0	-	0	0	.
chr16	2852830	2852831	chr16:2852831:C:G	rs12786	C	G	C	SOX2_HMG_3	-13	0	-	0	0	.
chr16	2868341	2868342	chr16:2868342:G:A	rs115946633	G	A	G	SOX2_HMG_3	24	0	-	0	0	.
chr16	3135735	3135736	chr16:3135736:T:C	rs560947	T	C	C	SOX2_HMG_3	9	1	+	10.388657793601752	9.581987659664707	GTACAATGGTATTGAGG
chr16	3154271	3154272	chr16:3154272:A:C	rs35137725	A	C	A	SOX2_HMG_3	-12	0	-	0	0	.
chr16	3373647	3373648	chr16:3373648:T:G	rs37800	T	G	G	SOX2_HMG_3	25	0	-	0	0	.
chr16	3525269	3525270	chr16:3525270:T:G	rs13332500	T	G	G	SOX2_HMG_3	35	0	+	0	0	.
chr16	3697202	3697203	chr16:3697203:C:T	rs1639150	C	T	T	SOX2_HMG_3	20	0	-	0	0	.
chr16	3782469	3782470	chr16:3782470:A:G	rs130021	A	G	A	SOX2_HMG_3	12	1	-	5.357422681042545	-1.5513320982726762	AAGCAATGTTTTTGTTG
chr16	4852317	4852318	chr16:4852318:G:C	rs74003517	G	C	G	SOX2_HMG_3	11	1	+	2.8330314273975534	-2.4425801016148445	TGTCAAGGCCAGTGTTT
chr16	4913439	4913440	chr16:4913440:T:A	rs141191494	T	A	T	SOX2_HMG_3	17	0	+	0	0	.
chr16	4913456	4913457	chr16:4913457:T:C	rs12444913	T	C	T	SOX2_HMG_3	34	0	+	0	0	.
chr16	5537699	5537700	chr16:5537700:A:T	rs8059193	A	T	A	SOX2_HMG_3	-9	0	-	0	0	.
chr16	5557916	5557917	chr16:5557917:A:G	rs55646071	A	G	G	SOX2_HMG_3	5	1	+	6.2988159434639535	-0.609938835851267	GAACAATGACAGTGGAA
chr16	5590263	5590264	chr16:5590264:C:T	rs8053659	C	T	G	SOX2_HMG_3	19	0	-	0	0	.
chr16	5590274	5590275	chr16:5590275:G:T	rs8052571	G	T	G	SOX2_HMG_3	8	1	-	11.031955962863393	10.917180448270965	AATCAATGCAAGTGAGC
chr16	6250449	6250450	chr16:6250450:G:T	rs62015142	G	T	G	SOX2_HMG_3	0	1	+	2.5765028012128672	1.69410692145288	GAGCAATGCTATGGACC
chr16	6298197	6298198	chr16:6298198:T:C	rs56291480	T	C	C	SOX2_HMG_3	6	1	+	2.087890167465933	-4.820864611849286	CAGCAATTGAAGAGATG
chr16	6298239	6298240	chr16:6298240:G:A	rs34406606	G	A	G	SOX2_HMG_3	-18	0	+	0	0	.
chr16	6414932	6414933	chr16:6414933:C:G	rs138552264	C	G	C	SOX2_HMG_3	21	0	-	0	0	.
chr16	6489014	6489015	chr16:6489015:C:T	rs62016826	C	T	T	SOX2_HMG_3	27	0	-	0	0	.
chr16	6489045	6489046	chr16:6489046:C:T	rs78322108	C	T	C	SOX2_HMG_3	-4	0	-	0	0	.
chr16	7009570	7009571	chr16:7009571:A:G	rs2029626	A	G	A	SOX2_HMG_3	24	0	+	0	0	.
chr16	7090157	7090158	chr16:7090158:T:C	rs1382480	T	C	T	SOX2_HMG_3	5	1	-	1.194695879462151	-5.714058899853068	CATCAATGTAGCTGAGG
chr16	7157082	7157083	chr16:7157083:A:G	rs149344958	A	G	A	SOX2_HMG_3	-11	0	+	0	0	.
chr16	7319878	7319879	chr16:7319879:A:G	rs35767895	A	G	A	SOX2_HMG_3	11	1	-	5.513130616899535	-1.1795608813328116	AGTCCATGGTATTGGTA
chr16	7398208	7398209	chr16:7398209:A:G	rs74012549	A	G	A	SOX2_HMG_3	15	1	-	5.468100349632129	2.6253911934552714	AGGCAATGATACTGATG
chr16	7718809	7718810	chr16:7718810:G:C	rs9939912	G	C	G	SOX2_HMG_3	-4	0	-	0	0	.
chr16	7745276	7745277	chr16:7745277:G:A	rs74331698	G	A	G	SOX2_HMG_3	32	0	-	0	0	.
chr16	7871679	7871680	chr16:7871680:G:T	rs11648513	G	T	G	SOX2_HMG_3	-6	0	+	0	0	.
chr16	8251560	8251561	chr16:8251561:C:T	rs55650867	C	T	T	SOX2_HMG_3	18	0	+	0	0	.
chr16	8356079	8356080	chr16:8356080:A:G	rs775837803	A	G	A	SOX2_HMG_3	-16	0	+	0	0	.
chr16	8374203	8374204	chr16:8374204:G:A	rs55982205	G	A	G	SOX2_HMG_3	-14	0	+	0	0	.
chr16	8409226	8409227	chr16:8409227:G:T	rs1528341	G	T	T	SOX2_HMG_3	3	1	-	4.8539943275450055	-2.0547604517702167	CTTCATTTTTATTGAAA
chr16	8500490	8500491	chr16:8500491:A:T	rs9921138	A	T	A	SOX2_HMG_3	12	1	-	7.851409757684247	0.9426549783690266	ACTTAATGTCATTGATA
chr16	8537741	8537742	chr16:8537742:C:T	rs71377115	C	T	C	SOX2_HMG_3	36	0	-	0	0	.
chr16	8620762	8620763	chr16:8620763:A:G	rs7195689	A	G	G	SOX2_HMG_3	-11	0	+	0	0	.
chr16	8683769	8683770	chr16:8683770:C:A	rs66839842	C	A	C	SOX2_HMG_3	29	0	-	0	0	.
chr16	8683786	8683787	chr16:8683787:T:G	rs35896679	T	G	T	SOX2_HMG_3	12	1	-	5.278150697509389	5.278150697509389	GTTCAATACTATAGATA
chr16	8862845	8862846	chr16:8862846:G:A	rs254945	G	A	A	SOX2_HMG_3	-9	0	-	0	0	.
chr16	8867005	8867006	chr16:8867006:A:G	rs12446587	A	G	G	SOX2_HMG_3	6	1	-	2.7977003182444187	-4.1110544610708	AGGCAATGGCAATGTTG
chr16	8867006	8867007	chr16:8867007:T:C	rs12447292	T	C	C	SOX2_HMG_3	5	1	-	2.7977003182444187	-4.1110544610708	AGGCAATGGCAATGTTG
chr16	8923491	8923492	chr16:8923492:T:C	rs55678416	T	C	T	SOX2_HMG_3	-15	0	-	0	0	.
chr16	8932241	8932242	chr16:8932242:C:T	rs77188284	C	T	C	SOX2_HMG_3	22	0	+	0	0	.
chr16	8941913	8941914	chr16:8941914:A:G	rs561383714	A	G	A	SOX2_HMG_3	1	1	+	0.8519631474547377	-0.9796844426245528	GATCATTGCAATAGAGG
chr16	8941923	8941924	chr16:8941924:T:C	rs56410892	T	C	T	SOX2_HMG_3	11	1	+	0.8519631474547377	-5.840728350777608	GATCATTGCAATAGAGG
chr16	8949357	8949358	chr16:8949358:T:C	rs7192015	T	C	T	SOX2_HMG_3	28	0	+	0	0	.
chr16	8961926	8961927	chr16:8961927:T:C	rs139826487	T	C	T	SOX2_HMG_3	5	1	-	8.91479173683853	2.0060369575233077	TATCAATGGCAGTAATG
chr16	9010624	9010625	chr16:9010625:G:A	rs35614103	G	A	G	SOX2_HMG_3	-3	0	+	0	0	.
chr16	9068451	9068452	chr16:9068452:C:T	rs35874364	C	T	c	SOX2_HMG_3	-13	0	-	0	0	.
chr16	9123056	9123057	chr16:9123057:C:T	rs12925781	C	T	C	SOX2_HMG_3	-12	0	-	0	0	.
chr16	9189045	9189046	chr16:9189046:C:T	rs9937578	C	T	C	SOX2_HMG_3	-17	0	-	0	0	.
chr16	9309724	9309725	chr16:9309725:C:T	rs3909919	C	T	C	SOX2_HMG_3	-15	0	-	0	0	.
chr16	9413029	9413030	chr16:9413030:A:G	rs191149099	A	G	A	SOX2_HMG_3	26	0	-	0	0	.
chr16	9484396	9484397	chr16:9484397:A:G	rs4780443	A	G	A	SOX2_HMG_3	5	1	+	2.893622077735838	-4.0151327015793825	CCACAATGGTATTCAAA
chr16	9677417	9677418	chr16:9677418:A:T	rs60158444	A	T	A	SOX2_HMG_3	25	0	-	0	0	.
chr16	9821854	9821855	chr16:9821855:C:A	rs2072450	C	A	C	SOX2_HMG_3	26	0	+	0	0	.
chr16	9976687	9976688	chr16:9976688:C:T	rs4998386	C	T	T	SOX2_HMG_3	29	0	+	0	0	.
chr16	10022841	10022842	chr16:10022842:C:A	rs9921906	C	A	A	SOX2_HMG_3	17	0	-	0	0	.
chr16	10093959	10093960	chr16:10093960:G:A	rs17683096	G	A	G	SOX2_HMG_3	25	0	+	0	0	.
chr16	10123048	10123049	chr16:10123049:C:T	rs7204513	C	T	t	SOX2_HMG_3	-4	0	+	0	0	.
chr16	10310662	10310663	chr16:10310663:A:G	rs1097922	A	G	A	SOX2_HMG_3	31	0	+	0	0	.
chr16	10648067	10648068	chr16:10648068:A:C	rs2719759	A	C	A	SOX2_HMG_3	23	0	-	0	0	.
chr16	10648086	10648087	chr16:10648087:T:C	rs7186996	T	C	T	SOX2_HMG_3	4	1	-	1.5224730262990092	-5.3862817530162115	CATCAAAGGCATTTAAT
chr16	10676683	10676684	chr16:10676684:G:A	rs1079016	G	A	A	SOX2_HMG_3	34	0	-	0	0	.
chr16	11060912	11060913	chr16:11060913:G:A	rs2286973	G	A	A	SOX2_HMG_3	36	0	-	0	0	.
chr16	11297332	11297333	chr16:11297333:G:C	rs1874021	G	C	G	SOX2_HMG_3	21	0	-	0	0	.
chr16	11300544	11300545	chr16:11300545:T:A	rs4238603	T	A	T	SOX2_HMG_3	-20	0	-	0	0	.
chr16	11367923	11367924	chr16:11367924:G:C	rs78544881	G	C	G	SOX2_HMG_3	16	1	+	10.425662510223258	8.425820015306714	AATCAATTGAATTGTGG
chr16	11384290	11384291	chr16:11384291:A:G	rs1139052	A	G	A	SOX2_HMG_3	12	1	-	3.597945510794076	-3.3108092685211434	CACCAATGACAATGAAG
chr16	11396912	11396913	chr16:11396913:G:A	rs11639830	G	A	G	SOX2_HMG_3	-10	0	-	0	0	.
chr16	11407575	11407576	chr16:11407576:T:C	rs8061112	T	C	T	SOX2_HMG_3	10	1	-	2.0389626281721736	-4.869792151143047	AGTCAATGTTATAGCAG
chr16	11475597	11475598	chr16:11475598:A:G	rs9936203	A	G	G	SOX2_HMG_3	4	1	+	2.810700800214148	-4.098053979101072	GTACAATGTCATGGAGG
chr16	11585092	11585093	chr16:11585093:C:A	rs55947021	C	A	A	SOX2_HMG_3	33	0	-	0	0	.
chr16	11624404	11624405	chr16:11624405:T:C	rs6498232	T	C	T	SOX2_HMG_3	18	0	+	0	0	.
chr16	11624455	11624456	chr16:11624456:T:C	rs112838092	T	C	T	SOX2_HMG_3	-1	0	-	0	0	.
chr16	11636603	11636604	chr16:11636604:C:T	rs137899528	C	T	c	SOX2_HMG_3	18	0	+	0	0	.
chr16	11687504	11687505	chr16:11687505:C:G	rs77314133	C	G	C	SOX2_HMG_3	33	0	-	0	0	.
chr16	11741468	11741469	chr16:11741469:G:C	rs151065717	G	C	G	SOX2_HMG_3	23	0	+	0	0	.
chr16	11964356	11964357	chr16:11964357:T:C	rs10451085	T	C	T	SOX2_HMG_3	-6	0	+	0	0	.
chr16	11964378	11964379	chr16:11964379:C:A	rs10451099	C	A	A	SOX2_HMG_3	16	1	+	2.1202317579807257	3.846386636506998	TGTCAGTGGCATTGTGC
chr16	11986684	11986685	chr16:11986685:A:C	rs434455	A	C	A	SOX2_HMG_3	0	1	+	6.383046779149144	5.8585741565231135	AGTCAATTCCATTTATG
chr16	12064967	12064968	chr16:12064968:C:T	rs17216341	C	T	C	SOX2_HMG_3	-15	0	+	0	0	.
chr16	12064990	12064991	chr16:12064991:A:C	rs9806955	A	C	C	SOX2_HMG_3	8	1	+	1.0466481645015597	1.1614236790939878	AGTCACTGACAGTGGGG
chr16	12076904	12076905	chr16:12076905:G:C	rs350244	G	C	C	SOX2_HMG_3	-15	0	-	0	0	.
chr16	12095925	12095926	chr16:12095926:G:A	rs565665946	G	A	G	SOX2_HMG_3	18	0	+	0	0	.
chr16	12148009	12148010	chr16:12148010:G:C	rs78415362	G	C	G	SOX2_HMG_3	27	0	+	0	0	.
chr16	12148015	12148016	chr16:12148016:G:C	rs350224	G	C	G	SOX2_HMG_3	33	0	+	0	0	.
chr16	12211909	12211910	chr16:12211910:G:A	rs709424	G	A	A	SOX2_HMG_3	-11	0	-	0	0	.
chr16	12214688	12214689	chr16:12214689:C:A	rs34896667	C	A	A	SOX2_HMG_3	-8	0	-	0	0	.
chr16	12289967	12289968	chr16:12289968:C:T	chr16:12289968:C:T	C	T	C	SOX2_HMG_3	-2	0	+	0	0	.
chr16	12289978	12289979	chr16:12289979:C:T	rs137964461	C	T	C	SOX2_HMG_3	9	1	+	2.840323261725984	3.64699339566303	CGTCACTGGCAGTGTGG
chr16	12573631	12573632	chr16:12573632:G:T	rs28622434	G	T	G	SOX2_HMG_3	-19	0	+	0	0	.
chr16	12577140	12577141	chr16:12577141:C:T	rs12172838	C	T	C	SOX2_HMG_3	-16	0	-	0	0	.
chr16	12647278	12647279	chr16:12647279:C:G	rs16960380	C	G	C	SOX2_HMG_3	-17	0	+	0	0	.
chr16	12647316	12647317	chr16:12647317:C:T	rs76342576	C	T	C	SOX2_HMG_3	21	0	+	0	0	.
chr16	12716374	12716375	chr16:12716375:C:T	rs8050225	C	T	C	SOX2_HMG_3	30	0	+	0	0	.
chr16	12759331	12759332	chr16:12759332:C:T	rs3859029	C	T	C	SOX2_HMG_3	34	0	-	0	0	.
chr16	12777781	12777782	chr16:12777782:T:C	rs4536458	T	C	C	SOX2_HMG_3	5	1	-	3.1083109424571393	-3.80044383685808	TGCCAATTACAGTGTTA
chr16	12971861	12971862	chr16:12971862:T:G	rs12445256	T	G	G	SOX2_HMG_3	23	0	+	0	0	.
chr16	13110842	13110843	chr16:13110843:A:G	rs4781413	A	G	A	SOX2_HMG_3	-9	0	-	0	0	.
chr16	13216918	13216919	chr16:13216919:C:A	rs56396226	C	A	C	SOX2_HMG_3	-11	0	-	0	0	.
chr16	13316595	13316596	chr16:13316596:T:A	rs176074	T	A	A	SOX2_HMG_3	15	1	-	1.9625065544236457	3.197408991140368	AGTGAAAGTTATTGAAG
chr16	13390964	13390965	chr16:13390965:A:G	rs6498410	A	G	A	SOX2_HMG_3	-18	0	+	0	0	.
chr16	13428424	13428425	chr16:13428425:G:C	rs17179855	G	C	G	SOX2_HMG_3	3	1	-	5.351785935027024	-1.5569688442881964	GGTCAATGTATTTGACA
chr16	13865749	13865750	chr16:13865750:T:C	rs231131	T	C	T	SOX2_HMG_3	5	1	-	6.99070387335367	0.08194909403844941	ACTCAATGTTTTTGAGA
chr16	14111978	14111979	chr16:14111979:G:A	rs1122454	G	A	G	SOX2_HMG_3	34	0	-	0	0	.
chr16	14282385	14282386	chr16:14282386:G:A	rs30240	G	A	G	SOX2_HMG_3	-17	0	+	0	0	.
chr16	15029999	15030000	chr16:15030000:T:C	rs149809548	T	C	.	SOX2_HMG_3	5	1	-	0.37201287165204355	-6.536741907663176	GATCCATGACTGTGAGG
chr16	15426310	15426311	chr16:15426311:C:T	rs153776	C	T	C	SOX2_HMG_3	32	0	-	0	0	.
chr16	15485079	15485080	chr16:15485080:C:T	rs72774892	C	T	C	SOX2_HMG_3	-14	0	+	0	0	.
chr16	15518442	15518443	chr16:15518443:A:C	chr16:15518443:A:C	A	C	A	SOX2_HMG_3	-8	0	+	0	0	.
chr16	15572656	15572657	chr16:15572657:C:T	rs116889381	C	T	C	SOX2_HMG_3	23	0	-	0	0	.
chr16	15824840	15824841	chr16:15824841:T:G	rs2733854	T	G	T	SOX2_HMG_3	35	0	-	0	0	.
chr16	15824842	15824843	chr16:15824843:G:A	rs2633506	G	A	A	SOX2_HMG_3	33	0	-	0	0	.
chr16	15985343	15985344	chr16:15985344:T:C	rs1874001	T	C	C	SOX2_HMG_3	17	0	+	0	0	.
chr16	16435352	16435353	chr16:16435353:C:A	rs200083091	C	A	c	SOX2_HMG_3	-4	0	-	0	0	.
chr16	16550020	16550021	chr16:16550021:A:C	rs2547768	A	C	A	SOX2_HMG_3	6	1	-	2.4505371567173717	-4.458217622597849	GATCAGTGGAATTCATT
chr16	16993234	16993235	chr16:16993235:C:T	rs114407399	C	T	C	SOX2_HMG_3	7	1	-	1.7309562211606453	-0.9978308994006895	CAACAAGGCAAGTGAGG
chr16	17178004	17178005	chr16:17178005:G:A	rs7190310	G	A	G	SOX2_HMG_3	-19	0	-	0	0	.
chr16	17212803	17212804	chr16:17212804:C:T	rs2311139	C	T	T	SOX2_HMG_3	30	0	-	0	0	.
chr16	17269478	17269479	chr16:17269479:A:G	rs62033193	A	G	A	SOX2_HMG_3	16	1	-	3.1372722700464064	1.9405002169060526	AAACTATGTTAGTGTTT
chr16	17278505	17278506	chr16:17278506:C:G	rs139368590	C	G	C	SOX2_HMG_3	30	0	-	0	0	.
chr16	17292977	17292978	chr16:17292978:C:T	rs7206651	C	T	T	SOX2_HMG_3	-1	0	+	0	0	.
chr16	17349053	17349054	chr16:17349054:T:C	rs4781996	T	C	T	SOX2_HMG_3	23	0	+	0	0	.
chr16	17370185	17370186	chr16:17370186:G:A	rs117001239	G	A	G	SOX2_HMG_3	-8	0	-	0	0	.
chr16	17484761	17484762	chr16:17484762:C:T	rs74014010	C	T	C	SOX2_HMG_3	-17	0	-	0	0	.
chr16	17497632	17497633	chr16:17497633:C:T	rs74014013	C	T	C	SOX2_HMG_3	-13	0	+	0	0	.
chr16	17595533	17595534	chr16:17595534:G:A	rs4310839	G	A	G	SOX2_HMG_3	-10	0	-	0	0	.
chr16	17669341	17669342	chr16:17669342:T:C	rs7189916	T	C	C	SOX2_HMG_3	-13	0	+	0	0	.
chr16	17828130	17828131	chr16:17828131:G:A	rs28507396	G	A	G	SOX2_HMG_3	19	0	-	0	0	.
chr16	18019386	18019387	chr16:18019387:T:C	rs72773656	T	C	T	SOX2_HMG_3	4	1	-	6.466231250727641	-0.4425235285875798	CCTCAAAGTTATTGAGA
chr16	18743871	18743872	chr16:18743872:C:A	rs7206538	C	A	C	SOX2_HMG_3	28	0	+	0	0	.
chr16	18835106	18835107	chr16:18835107:G:A	rs56079655	G	A	G	SOX2_HMG_3	7	1	+	5.908747884315213	3.1799607637538787	TTTCAGTGGCAGTGATG
chr16	18956051	18956052	chr16:18956052:A:G	rs8047908	A	G	a	SOX2_HMG_3	6	1	-	3.67186393383844	-3.2368908454767795	AAACAATTGAAGTGGGG
chr16	19382463	19382464	chr16:19382464:G:C	rs56102907	G	C	g	SOX2_HMG_3	5	1	+	2.2440436482553183	2.2440436482553183	TACCAGTGGCAGTGAGG
chr16	19386768	19386769	chr16:19386769:T:C	rs7187909	T	C	C	SOX2_HMG_3	-5	0	+	0	0	.
chr16	19522443	19522444	chr16:19522444:G:A	rs1194735147	G	A	G	SOX2_HMG_3	-9	0	-	0	0	.
chr16	19706662	19706663	chr16:19706663:C:A	rs34069083	C	A	C	SOX2_HMG_3	-2	0	-	0	0	.
chr16	19876150	19876151	chr16:19876151:C:T	rs1292641	C	T	C	SOX2_HMG_3	11	1	-	1.8071326738674243	-3.4684788551449732	AATCGGTGGTAGTGAGG
chr16	20053572	20053573	chr16:20053573:G:A	rs2608179	G	A	A	SOX2_HMG_3	24	0	-	0	0	.
chr16	20200603	20200604	chr16:20200604:C:T	rs117416259	C	T	c	SOX2_HMG_3	5	1	-	2.118094795229137	9.026849574544357	TGACAGTGTCAGTGAAG
chr16	20327808	20327809	chr16:20327809:T:C	rs4643330	T	C	C	SOX2_HMG_3	-1	0	+	0	0	.
chr16	20381009	20381010	chr16:20381010:G:A	rs77924615	G	A	G	SOX2_HMG_3	-4	0	+	0	0	.
chr16	20576342	20576343	chr16:20576343:C:T	rs148231650	C	T	-	SOX2_HMG_3	-18	0	+	0	0	.
chr16	20576384	20576385	chr16:20576385:G:A	rs77507530	G	A	-	SOX2_HMG_3	24	0	+	0	0	.
chr16	20711313	20711314	chr16:20711314:A:G	rs56139896	A	G	A	SOX2_HMG_3	31	0	-	0	0	.
chr16	20763980	20763981	chr16:20763981:T:C	rs5710	T	C	T	SOX2_HMG_3	27	0	+	0	0	.
chr16	21527028	21527029	chr16:21527029:G:A	rs545205	G	A	.	SOX2_HMG_3	-17	0	+	0	0	.
chr16	21527065	21527066	chr16:21527066:G:A	chr16:21527066:G:A	G	A	.	SOX2_HMG_3	20	0	+	0	0	.
chr16	21527065	21527066	chr16:21527066:G:C	rs740592	G	C	.	SOX2_HMG_3	20	0	+	0	0	.
chr16	21637563	21637564	chr16:21637564:C:T	rs577184067	C	T	c	SOX2_HMG_3	-2	0	-	0	0	.
chr16	21721514	21721515	chr16:21721515:A:G	rs8060224	A	G	a	SOX2_HMG_3	5	1	+	4.277750444806519	-2.6310043345087015	TGTCAATAATACTGAGG
chr16	21727665	21727666	chr16:21727666:G:C	rs7184989	G	C	C	SOX2_HMG_3	-16	0	+	0	0	.
chr16	21727670	21727671	chr16:21727671:G:A	rs12934324	G	A	G	SOX2_HMG_3	-11	0	+	0	0	.
chr16	22638085	22638086	chr16:22638086:A:C	rs979583	A	C	A	SOX2_HMG_3	-3	0	+	0	0	.
chr16	22639887	22639888	chr16:22639888:G:A	rs382106	G	A	A	SOX2_HMG_3	18	0	-	0	0	.
chr16	22963553	22963554	chr16:22963554:A:C	rs2519981	A	C	C	SOX2_HMG_3	-4	0	-	0	0	.
chr16	23036069	23036070	chr16:23036070:A:C	rs11074538	A	C	C	SOX2_HMG_3	-9	0	+	0	0	.
chr16	23174865	23174866	chr16:23174866:C:T	rs530940821	C	T	C	SOX2_HMG_3	30	0	-	0	0	.
chr16	23352077	23352078	chr16:23352078:A:T	rs3785361	A	T	A	SOX2_HMG_3	25	0	-	0	0	.
chr16	23514826	23514827	chr16:23514827:A:G	rs145948178	A	G	A	SOX2_HMG_3	-1	0	+	0	0	.
chr16	23537607	23537608	chr16:23537608:C:T	rs72776122	C	T	c	SOX2_HMG_3	7	1	-	1.3743997974139404	-1.3543873231473944	GATCAACGAGAGTGAGA
chr16	23943077	23943078	chr16:23943078:A:G	rs195995	A	G	A	SOX2_HMG_3	14	1	+	1.4437456766375094	-2.73813194066361	AGGCAATGCCATGGACA
chr16	23951514	23951515	chr16:23951515:C:A	rs7199531	C	A	A	SOX2_HMG_3	7	1	-	1.5862315802259377	-0.4584789245075981	GATCACTGGAGTTGAGG
chr16	23999474	23999475	chr16:23999475:A:G	rs7201380	A	G	A	SOX2_HMG_3	28	0	-	0	0	.
chr16	24021894	24021895	chr16:24021895:G:A	rs9926282	G	A	g	SOX2_HMG_3	0	1	-	9.236038063682033	9.09870908563337	CACCAATTTTATTGAAT
chr16	24114416	24114417	chr16:24114417:T:C	rs28603301	T	C	T	SOX2_HMG_3	32	0	+	0	0	.
chr16	24611690	24611691	chr16:24611691:A:T	rs2033218	A	T	A	SOX2_HMG_3	26	0	+	0	0	.
chr16	25091198	25091199	chr16:25091199:T:C	rs874562	T	C	T	SOX2_HMG_3	-7	0	+	0	0	.
chr16	25093508	25093509	chr16:25093509:T:C	rs951566348	T	C	T	SOX2_HMG_3	12	1	+	3.0120928445371886	-3.8966619347780314	CAACAATAGTTTTGAGG
chr16	25093519	25093520	chr16:25093520:T:C	rs77439413	T	C	T	SOX2_HMG_3	23	0	+	0	0	.
chr16	25948836	25948837	chr16:25948837:A:G	rs4075109	A	G	G	SOX2_HMG_3	-6	0	+	0	0	.
chr16	25948850	25948851	chr16:25948851:C:T	rs34709550	C	T	C	SOX2_HMG_3	8	1	+	2.8808559554533346	3.7525923080891976	CAGCAATGCCGTTGTTA
chr16	25963565	25963566	chr16:25963566:G:A	rs563376805	G	A	G	SOX2_HMG_3	30	0	-	0	0	.
chr16	26353227	26353228	chr16:26353228:C:A	rs28592838	C	A	A	SOX2_HMG_3	33	0	-	0	0	.
chr16	26883599	26883600	chr16:26883600:A:G	rs56336353	A	G	A	SOX2_HMG_3	34	0	-	0	0	.
chr16	27174648	27174649	chr16:27174649:C:G	rs769964815	C	G	C	SOX2_HMG_3	25	0	+	0	0	.
chr16	27268025	27268026	chr16:27268026:G:A	rs9930726	G	A	A	SOX2_HMG_3	-14	0	+	0	0	.
chr16	27415073	27415074	chr16:27415074:G:A	rs56383417	G	A	G	SOX2_HMG_3	32	0	+	0	0	.
chr16	27427133	27427134	chr16:27427134:C:T	rs182048616	C	T	C	SOX2_HMG_3	1	1	-	1.634472426877696	3.466120016956987	AGGCAAGGCCAGTGAAA
chr16	27516138	27516139	chr16:27516139:C:G	rs148761519	C	G	C	SOX2_HMG_3	30	0	+	0	0	.
chr16	27840554	27840555	chr16:27840555:T:C	rs1645349	T	C	T	SOX2_HMG_3	27	0	-	0	0	.
chr16	27840556	27840557	chr16:27840557:T:C	rs9923069	T	C	T	SOX2_HMG_3	25	0	-	0	0	.
chr16	27978951	27978952	chr16:27978952:C:A	rs6498054	C	A	C	SOX2_HMG_3	23	0	-	0	0	.
chr16	28620263	28620264	chr16:28620264:T:G	rs1968752	T	G	.	SOX2_HMG_3	-19	0	-	0	0	.
chr16	28814631	28814632	chr16:28814632:A:G	rs56186137	A	G	.	SOX2_HMG_3	4	1	+	7.503298535123001	0.5945437558077801	TGTCAATGTTCTTGAGA
chr16	28842674	28842675	chr16:28842675:A:C	rs3088215	A	C	.	SOX2_HMG_3	-2	0	-	0	0	.
chr16	29129366	29129367	chr16:29129367:T:C	rs1646129	T	C	.	SOX2_HMG_3	6	1	+	3.2584951315915216	-3.650259647723699	AATCAGTTGCATTGGAA
chr16	29234011	29234012	chr16:29234012:T:C	rs252475	T	C	N	SOX2_HMG_3	10	1	-	2.466588467420927	-4.442166311894294	CGTCATTTGTAGTGTTT
chr16	29294718	29294719	chr16:29294719:A:T	rs112358628	A	T	.	SOX2_HMG_3	10	1	+	3.6963084021809856	-3.212446377134235	TAACATTTTTATTGAGG
chr16	29852858	29852859	chr16:29852859:G:A	rs74017638	G	A	G	SOX2_HMG_3	-15	0	+	0	0	.
chr16	30123685	30123686	chr16:30123686:G:A	rs942584110	G	A	.	SOX2_HMG_3	33	0	+	0	0	.
chr16	31095020	31095021	chr16:31095021:A:G	rs192820568	A	G	A	SOX2_HMG_3	11	1	+	1.4897015411483892	6.765313070160788	CATCAAGGGAAATGAAG
chr16	31262208	31262209	chr16:31262209:T:A	rs7196256	T	A	A	SOX2_HMG_3	36	0	+	0	0	.
chr16	31695842	31695843	chr16:31695843:T:C	rs933334756	T	C	t	SOX2_HMG_3	-19	0	+	0	0	.
chr16	31708405	31708406	chr16:31708406:G:T	rs3751742	G	T	g	SOX2_HMG_3	18	0	-	0	0	.
chr16	31869660	31869661	chr16:31869661:A:C	chr16:31869661:A:C	A	C	.	SOX2_HMG_3	-4	0	+	0	0	.
chr16	31869676	31869677	chr16:31869677:T:G	chr16:31869677:T:G	T	G	.	SOX2_HMG_3	12	1	+	3.215529312081197	-3.6932254672340235	TGACAATGGCAGTCATG
chr16	34574221	34574222	chr16:34574222:T:C	rs1222614021	T	C	.	SOX2_HMG_3	25	0	+	0	0	.
chr16	34574226	34574227	chr16:34574227:G:A	rs1347717593	G	A	.	SOX2_HMG_3	30	0	+	0	0	.
chr16	34594251	34594252	chr16:34594252:T:A	rs904323822	T	A	.	SOX2_HMG_3	-12	0	-	0	0	.
chr16	34595603	34595604	chr16:34595604:T:C	chr16:34595604:T:C	T	C	.	SOX2_HMG_3	27	0	+	0	0	.
chr16	46387358	46387359	chr16:46387359:A:G	rs28837417	A	G	.	SOX2_HMG_3	5	1	-	2.7681739319558543	2.7681739319558543	GATGATTGCCATTGATT
chr16	46387380	46387381	chr16:46387381:C:T	rs4511562	C	T	.	SOX2_HMG_3	-17	0	-	0	0	.
chr16	46389541	46389542	chr16:46389542:A:G	rs7195077	A	G	.	SOX2_HMG_3	-20	0	-	0	0	.
chr16	46687849	46687850	chr16:46687850:T:C	rs78674672	T	C	T	SOX2_HMG_3	22	0	-	0	0	.
chr16	47905005	47905006	chr16:47905006:A:G	rs12102461	A	G	G	SOX2_HMG_3	-7	0	+	0	0	.
chr16	47905007	47905008	chr16:47905008:C:G	rs12102967	C	G	G	SOX2_HMG_3	-5	0	+	0	0	.
chr16	48188880	48188881	chr16:48188881:T:A	rs75882145	T	A	T	SOX2_HMG_3	15	1	+	3.355583204562103	2.1206807678453807	AGCCAATGGCATTTATT
chr16	48612940	48612941	chr16:48612941:A:T	rs2129243	A	T	T	SOX2_HMG_3	-7	0	+	0	0	.
chr16	48898471	48898472	chr16:48898472:A:G	rs2216190	A	G	G	SOX2_HMG_3	15	1	+	3.4277412628949135	2.995267681344013	GATCACTGTTAATGAAT
chr16	48972500	48972501	chr16:48972501:T:C	rs10521173	T	C	C	SOX2_HMG_3	14	1	-	1.3394717157031046	-2.8424059015980143	GGTCTCTGGTATTGAGA
chr16	49269437	49269438	chr16:49269438:G:C	rs893174	G	C	G	SOX2_HMG_3	11	1	+	3.4963800701873238	-1.779231458825074	GCTTAATGCAAGTGAAA
chr16	49408929	49408930	chr16:49408930:G:A	rs11862457	G	A	G	SOX2_HMG_3	-12	0	-	0	0	.
chr16	49426292	49426293	chr16:49426293:A:G	rs80270640	A	G	A	SOX2_HMG_3	14	1	+	5.225109316681818	1.0432316993806994	AAGCAATGAAGTTGATG
chr16	49471183	49471184	chr16:49471184:G:C	rs111493592	G	C	g	SOX2_HMG_3	1	1	-	4.168905033951083	5.343301296395108	ACTCAATGCCTGTGAGG
chr16	49557873	49557874	chr16:49557874:A:T	rs12932268	A	T	A	SOX2_HMG_3	18	0	+	0	0	.
chr16	49605093	49605094	chr16:49605094:C:T	rs12919547	C	T	T	SOX2_HMG_3	33	0	+	0	0	.
chr16	49964286	49964287	chr16:49964287:C:T	rs28563094	C	T	C	SOX2_HMG_3	3	1	+	3.8225515180324665	-3.086203261282752	AGTCATTTCAATTGAAA
chr16	49964316	49964317	chr16:49964317:A:T	rs1833252	A	T	T	SOX2_HMG_3	33	0	+	0	0	.
chr16	50003061	50003062	chr16:50003062:A:G	rs11863670	A	G	A	SOX2_HMG_3	-19	0	+	0	0	.
chr16	50026148	50026149	chr16:50026149:C:T	rs144383340	C	T	C	SOX2_HMG_3	-7	0	-	0	0	.
chr16	50094258	50094259	chr16:50094259:G:A	rs62029886	G	A	G	SOX2_HMG_3	32	0	+	0	0	.
chr16	50296718	50296719	chr16:50296719:G:C	rs8052384	G	C	G	SOX2_HMG_3	23	0	+	0	0	.
chr16	50304011	50304012	chr16:50304012:G:T	rs142453663	G	T	G	SOX2_HMG_3	21	0	+	0	0	.
chr16	50974633	50974634	chr16:50974634:T:C	rs58302873	T	C	T	SOX2_HMG_3	5	1	-	2.4249199970341646	-4.483834782281056	CATCCATATTAGTGACC
chr16	51138611	51138612	chr16:51138612:G:A	rs77466256	G	A	G	SOX2_HMG_3	-17	0	+	0	0	.
chr16	51218240	51218241	chr16:51218241:G:C	rs8044297	G	C	C	SOX2_HMG_3	-6	0	+	0	0	.
chr16	51465418	51465419	chr16:51465419:A:G	rs2379053	A	G	G	SOX2_HMG_3	29	0	+	0	0	.
chr16	51732789	51732790	chr16:51732790:G:A	rs1486440	G	A	G	SOX2_HMG_3	-16	0	+	0	0	.
chr16	51732795	51732796	chr16:51732796:G:A	rs1486441	G	A	G	SOX2_HMG_3	-10	0	+	0	0	.
chr16	51891790	51891791	chr16:51891791:T:C	rs13335019	T	C	T	SOX2_HMG_3	5	1	-	7.639963256481649	0.7312084771664294	AACCAATGAAAGTGAGA
chr16	52445858	52445859	chr16:52445859:A:T	rs2075236	A	T	A	SOX2_HMG_3	13	1	-	4.565563210938453	4.565563210938453	AAGCAATGGAATTTAAA
chr16	52655600	52655601	chr16:52655601:A:G	rs9925027	A	G	A	SOX2_HMG_3	28	0	+	0	0	.
chr16	53256911	53256912	chr16:53256912:C:G	rs1362440	C	G	C	SOX2_HMG_3	29	0	-	0	0	.
chr16	53528098	53528099	chr16:53528099:C:T	rs28710953	C	T	C	SOX2_HMG_3	-17	0	+	0	0	.
chr16	53837990	53837991	chr16:53837991:A:C	rs17818920	A	C	C	SOX2_HMG_3	24	0	+	0	0	.
chr16	53896694	53896695	chr16:53896695:G:C	rs2111113	G	C	C	SOX2_HMG_3	-18	0	-	0	0	.
chr16	53923087	53923088	chr16:53923088:G:A	rs570366223	G	A	G	SOX2_HMG_3	-11	0	+	0	0	.
chr16	53946888	53946889	chr16:53946889:T:A	rs113964298	T	A	T	SOX2_HMG_3	15	1	+	3.5727505747979524	2.33784813808123	CAGTAATGATATTGTTA
chr16	54066605	54066606	chr16:54066606:G:A	rs1076471	G	A	A	SOX2_HMG_3	0	1	+	2.7766193601998865	2.556025081114592	GCCCATTGGTATTGAAG
chr16	54067001	54067002	chr16:54067002:A:G	rs2075204	A	G	A	SOX2_HMG_3	6	1	-	3.7688216832154606	-3.13993309609976	GAGCAATAACATTAATG
chr16	54067018	54067019	chr16:54067019:C:T	rs13338113	C	T	T	SOX2_HMG_3	-11	0	-	0	0	.
chr16	54175178	54175179	chr16:54175179:C:T	rs527778583	C	T	C	SOX2_HMG_3	31	0	-	0	0	.
chr16	54214308	54214309	chr16:54214309:T:A	rs55760183	T	A	T	SOX2_HMG_3	32	0	+	0	0	.
chr16	54353171	54353172	chr16:54353172:G:A	rs2216063	G	A	G	SOX2_HMG_3	14	1	+	3.873262413884733	8.055140031185852	TAGCAATGAAAGTGGTC
chr16	54370179	54370180	chr16:54370180:G:A	rs80227516	G	A	A	SOX2_HMG_3	28	0	+	0	0	.
chr16	54370187	54370188	chr16:54370188:T:C	rs80247320	T	C	T	SOX2_HMG_3	36	0	+	0	0	.
chr16	54417967	54417968	chr16:54417968:G:A	rs7186341	G	A	G	SOX2_HMG_3	-18	0	+	0	0	.
chr16	54430305	54430306	chr16:54430306:G:T	rs7189231	G	T	T	SOX2_HMG_3	14	1	+	2.6185315449735325	4.087635317460357	CCACAATGGAAGTGGAG
chr16	54447926	54447927	chr16:54447927:C:T	rs61437728	C	T	C	SOX2_HMG_3	-6	0	+	0	0	.
chr16	54447966	54447967	chr16:54447967:A:C	rs147567685	A	C	A	SOX2_HMG_3	34	0	+	0	0	.
chr16	54585923	54585924	chr16:54585924:G:C	rs744213	G	C	g	SOX2_HMG_3	17	0	-	0	0	.
chr16	54817622	54817623	chr16:54817623:C:T	rs144866952	C	T	C	SOX2_HMG_3	29	0	-	0	0	.
chr16	54927597	54927598	chr16:54927598:G:T	rs146956739	G	T	G	SOX2_HMG_3	3	1	-	3.2997568099944274	-3.608997969320794	TCGCAATTGTATTGTCA
chr16	55044537	55044538	chr16:55044538:G:A	rs936879	G	A	G	SOX2_HMG_3	-9	0	-	0	0	.
chr16	55076029	55076030	chr16:55076030:C:A	rs7198804	C	A	A	SOX2_HMG_3	-2	0	-	0	0	.
chr16	55118220	55118221	chr16:55118221:C:T	rs113014708	C	T	C	SOX2_HMG_3	24	0	-	0	0	.
chr16	55118246	55118247	chr16:55118247:G:C	rs62032735	G	C	G	SOX2_HMG_3	-2	0	-	0	0	.
chr16	55321867	55321868	chr16:55321868:C:T	rs115881607	C	T	C	SOX2_HMG_3	-6	0	-	0	0	.
chr16	55442581	55442582	chr16:55442582:A:T	rs11647081	A	T	A	SOX2_HMG_3	18	0	+	0	0	.
chr16	55781609	55781610	chr16:55781610:T:G	rs28409947	T	G	T	SOX2_HMG_3	14	1	-	6.852299078023796	0.020000372457103843	AGTGAATGGTATTGACA
chr16	55811540	55811541	chr16:55811541:C:T	rs151069757	C	T	c	SOX2_HMG_3	33	0	-	0	0	.
chr16	55875357	55875358	chr16:55875358:T:A	rs7188305	T	A	A	SOX2_HMG_3	34	0	-	0	0	.
chr16	56121805	56121806	chr16:56121806:C:T	rs7202833	C	T	C	SOX2_HMG_3	-9	0	-	0	0	.
chr16	56289319	56289320	chr16:56289320:A:G	rs8043572	A	G	A	SOX2_HMG_3	5	1	+	4.4942032505984235	-2.4145515287167973	CATCAATGAGAGTGGTT
chr16	56673465	56673466	chr16:56673466:A:G	rs34984270	A	G	.	SOX2_HMG_3	25	0	-	0	0	.
chr16	56691260	56691261	chr16:56691261:A:G	rs8064100	A	G	A	SOX2_HMG_3	-9	0	+	0	0	.
chr16	56839582	56839583	chr16:56839583:C:T	rs1138295	C	T	C	SOX2_HMG_3	-3	0	+	0	0	.
chr16	57018071	57018072	chr16:57018072:C:A	rs16965070	C	A	t	SOX2_HMG_3	25	0	+	0	0	.
chr16	57352653	57352654	chr16:57352654:T:C	rs223881	T	C	C	SOX2_HMG_3	-14	0	+	0	0	.
chr16	57388533	57388534	chr16:57388534:A:T	rs778166807	A	T	g	SOX2_HMG_3	10	1	+	1.1007979136882309	-5.8079568656269895	GATCTTTGCCATTGAGT
chr16	57507957	57507958	chr16:57507958:G:A	rs766791642	G	A	G	SOX2_HMG_3	19	0	+	0	0	.
chr16	57507972	57507973	chr16:57507973:A:G	rs62039369	A	G	A	SOX2_HMG_3	34	0	+	0	0	.
chr16	57892264	57892265	chr16:57892265:G:A	rs8044277	G	A	A	SOX2_HMG_3	-3	0	+	0	0	.
chr16	57892266	57892267	chr16:57892267:A:G	rs8046202	A	G	G	SOX2_HMG_3	-1	0	+	0	0	.
chr16	57994349	57994350	chr16:57994350:T:C	rs4145589	T	C	C	SOX2_HMG_3	20	0	+	0	0	.
chr16	58251283	58251284	chr16:58251284:G:A	rs2731761	G	A	G	SOX2_HMG_3	31	0	+	0	0	.
chr16	58506157	58506158	chr16:58506158:C:G	rs2550426	C	G	G	SOX2_HMG_3	-20	0	+	0	0	.
chr16	58904526	58904527	chr16:58904527:C:T	rs74620361	C	T	C	SOX2_HMG_3	-17	0	-	0	0	.
chr16	59122500	59122501	chr16:59122501:C:G	rs12922639	C	G	G	SOX2_HMG_3	4	1	+	1.869817260997699	1.869817260997699	TATCCATGTCAGAGATA
chr16	59122529	59122530	chr16:59122530:G:A	rs16960867	G	A	A	SOX2_HMG_3	33	0	+	0	0	.
chr16	59182485	59182486	chr16:59182486:T:C	rs67585228	T	C	C	SOX2_HMG_3	-15	0	+	0	0	.
chr16	59336462	59336463	chr16:59336463:A:G	rs56176679	A	G	A	SOX2_HMG_3	11	1	-	7.211298152438964	0.5186066542066164	GCTCATTGTTATTGAGA
chr16	59570621	59570622	chr16:59570622:T:C	rs13338586	T	C	T	SOX2_HMG_3	-11	0	+	0	0	.
chr16	59808218	59808219	chr16:59808219:C:T	rs72787706	C	T	c	SOX2_HMG_3	-15	0	-	0	0	.
chr16	59840159	59840160	chr16:59840160:G:A	rs79445719	G	A	g	SOX2_HMG_3	7	1	+	3.6164265795081194	0.8876394589467851	TGTAAATGGTATTGGAA
chr16	59878696	59878697	chr16:59878697:T:C	rs77574902	T	C	T	SOX2_HMG_3	9	1	-	4.803958235527773	0.2231832063744048	AATCAATGCATGTGTTA
chr16	59878720	59878721	chr16:59878721:T:C	rs72787758	T	C	T	SOX2_HMG_3	-15	0	-	0	0	.
chr16	60182149	60182150	chr16:60182150:C:T	rs7195993	C	T	C	SOX2_HMG_3	-19	0	-	0	0	.
chr16	60485805	60485806	chr16:60485806:C:T	rs9930207	C	T	T	SOX2_HMG_3	26	0	+	0	0	.
chr16	60645697	60645698	chr16:60645698:G:A	rs13336308	G	A	A	SOX2_HMG_3	15	1	+	3.367256702521244	3.799730284072145	AGTAAATTTCAGTGAGT
chr16	61382649	61382650	chr16:61382650:G:A	rs74456422	G	A	g	SOX2_HMG_3	-8	0	+	0	0	.
chr16	62834266	62834267	chr16:62834267:C:T	rs16965221	C	T	T	SOX2_HMG_3	-16	0	-	0	0	.
chr16	63063102	63063103	chr16:63063103:G:C	rs7206149	G	C	C	SOX2_HMG_3	-19	0	-	0	0	.
chr16	63787217	63787218	chr16:63787218:A:G	chr16:63787218:A:G	A	G	A	SOX2_HMG_3	-1	0	-	0	0	.
chr16	63851835	63851836	chr16:63851836:G:A	rs4949082	G	A	G	SOX2_HMG_3	11	1	+	1.7909983204312352	-3.484613208581162	GATGAAAGTCAGTGAAG
chr16	63937380	63937381	chr16:63937381:A:C	rs8046281	A	C	C	SOX2_HMG_3	35	0	-	0	0	.
chr16	64133253	64133254	chr16:64133254:C:G	chr16:64133254:C:G	C	G	C	SOX2_HMG_3	8	1	+	1.686873768539983	2.4211422013111834	AATCTAAGCTATTGAGT
chr16	64186294	64186295	chr16:64186295:C:T	rs184773717	C	T	C	SOX2_HMG_3	13	1	-	4.626689098997561	-2.2820656803176593	AGCCAATTTCAGTGACA
chr16	64295673	64295674	chr16:64295674:G:A	rs62039800	G	A	G	SOX2_HMG_3	18	0	+	0	0	.
chr16	64363242	64363243	chr16:64363243:A:G	rs146413077	A	G	A	SOX2_HMG_3	-4	0	-	0	0	.
chr16	64397300	64397301	chr16:64397301:A:T	chr16:64397301:A:T	A	T	A	SOX2_HMG_3	30	0	-	0	0	.
chr16	64654207	64654208	chr16:64654208:G:A	rs7191764	G	A	G	SOX2_HMG_3	-19	0	-	0	0	.
chr16	64920448	64920449	chr16:64920449:T:C	rs4967877	T	C	T	SOX2_HMG_3	-4	0	+	0	0	.
chr16	64983620	64983621	chr16:64983621:T:C	rs1025312	T	C	T	SOX2_HMG_3	-4	0	-	0	0	.
chr16	65156315	65156316	chr16:65156316:T:C	rs12932858	T	C	T	SOX2_HMG_3	5	1	-	5.216810253292095	-1.6919445260231265	AGTCAATTTCATAGAAT
chr16	65225169	65225170	chr16:65225170:T:C	rs9934772	T	C	T	SOX2_HMG_3	4	1	-	3.888318908555719	-3.0204358707595005	AAACATTGTTATTGGTG
chr16	65404682	65404683	chr16:65404683:G:C	rs138892820	G	C	G	SOX2_HMG_3	9	1	-	8.390730099176825	2.7580498620137712	TATCAATTCCAGTGTGA
chr16	65601498	65601499	chr16:65601499:A:G	rs6499011	A	G	A	SOX2_HMG_3	17	0	-	0	0	.
chr16	65944483	65944484	chr16:65944484:C:G	rs254351	C	G	G	SOX2_HMG_3	-4	0	-	0	0	.
chr16	65945934	65945935	chr16:65945935:T:C	rs166210	T	C	C	SOX2_HMG_3	-12	0	-	0	0	.
chr16	66030181	66030182	chr16:66030182:C:G	rs534010589	C	G	C	SOX2_HMG_3	31	0	+	0	0	.
chr16	66080002	66080003	chr16:66080003:T:C	rs151136299	T	C	T	SOX2_HMG_3	5	1	-	2.5901065211288534	-4.318648258186364	ACACAATGTCTTTGAGG
chr16	66266287	66266288	chr16:66266288:C:G	rs2576483	C	G	C	SOX2_HMG_3	27	0	-	0	0	.
chr16	66266292	66266293	chr16:66266293:A:C	rs893199	A	C	C	SOX2_HMG_3	22	0	-	0	0	.
chr16	66348080	66348081	chr16:66348081:C:A	rs12596005	C	A	C	SOX2_HMG_3	-14	0	-	0	0	.
chr16	67226514	67226515	chr16:67226515:T:C	rs76561044	T	C	T	SOX2_HMG_3	5	1	+	2.5193391657223607	2.5193391657223607	GATCATTGCAGTTGATG
chr16	67385121	67385122	chr16:67385122:G:T	rs8059226	G	T	G	SOX2_HMG_3	29	0	-	0	0	.
chr16	67564529	67564530	chr16:67564530:G:C	rs35482869	G	C	G	SOX2_HMG_3	-4	0	-	0	0	.
chr16	68067576	68067577	chr16:68067577:C:T	rs113896227	C	T	C	SOX2_HMG_3	29	0	-	0	0	.
chr16	68646569	68646570	chr16:68646570:C:G	rs148274676	C	G	C	SOX2_HMG_3	21	0	+	0	0	.
chr16	68849018	68849019	chr16:68849019:C:T	rs59559079	C	T	T	SOX2_HMG_3	-12	0	+	0	0	.
chr16	69396486	69396487	chr16:69396487:G:A	rs72797165	G	A	G	SOX2_HMG_3	26	0	+	0	0	.
chr16	69410356	69410357	chr16:69410357:A:G	rs78157189	A	G	A	SOX2_HMG_3	11	1	-	2.9985851954298814	-3.694106302802464	GGGTAATGACATTGAGG
chr16	69762134	69762135	chr16:69762135:A:G	rs150210700	A	G	A	SOX2_HMG_3	23	0	-	0	0	.
chr16	69772793	69772794	chr16:69772794:C:T	chr16:69772794:C:T	C	T	C	SOX2_HMG_3	22	0	-	0	0	.
chr16	69844257	69844258	chr16:69844258:A:G	rs3790088	A	G	A	SOX2_HMG_3	35	0	+	0	0	.
chr16	69849303	69849304	chr16:69849304:A:C	chr16:69849304:A:C	A	C	A	SOX2_HMG_3	-14	0	-	0	0	.
chr16	70161374	70161375	chr16:70161375:C:A	rs374268826	C	A	C	SOX2_HMG_3	34	0	-	0	0	.
chr16	70404555	70404556	chr16:70404556:T:C	rs79421354	T	C	T	SOX2_HMG_3	12	1	+	3.8499833027317205	-3.0587714765835	AACCAGTGTTAGTGAGG
chr16	70496643	70496644	chr16:70496644:G:A	rs11641683	G	A	G	SOX2_HMG_3	35	0	+	0	0	.
chr16	70682763	70682764	chr16:70682764:T:G	rs58623884	T	G	T	SOX2_HMG_3	29	0	+	0	0	.
chr16	70731224	70731225	chr16:70731225:G:A	rs60028268	G	A	A	SOX2_HMG_3	25	0	+	0	0	.
chr16	70803715	70803716	chr16:70803716:G:T	rs77069808	G	T	G	SOX2_HMG_3	29	0	+	0	0	.
chr16	72000964	72000965	chr16:72000965:T:C	rs7185215	T	C	T	SOX2_HMG_3	8	1	+	6.754591055676773	5.882854703040909	AATAAATGTTATTGTGT
chr16	72428624	72428625	chr16:72428625:A:C	rs45475692	A	C	A	SOX2_HMG_3	4	1	+	3.1272651169627452	-3.781489662352475	AGTCAATTATTTTGTAG
chr16	72783739	72783740	chr16:72783740:G:A	rs145500933	G	A	G	SOX2_HMG_3	-3	0	+	0	0	.
chr16	72925067	72925068	chr16:72925068:C:T	rs12922127	C	T	T	SOX2_HMG_3	-8	0	+	0	0	.
chr16	72925085	72925086	chr16:72925086:A:G	rs11864105	A	G	G	SOX2_HMG_3	10	1	+	7.980570806597399	1.0718160272821782	TGCCAATGCCAGTGATA
chr16	72962096	72962097	chr16:72962097:T:C	rs756718	T	C	T	SOX2_HMG_3	-6	0	+	0	0	.
chr16	72978387	72978388	chr16:72978388:T:C	rs12596810	T	C	T	SOX2_HMG_3	16	1	-	8.020791658421032	8.294479274811303	GATCAATGAAAATGAAA
chr16	72985851	72985852	chr16:72985852:C:T	rs780850790	C	T	C	SOX2_HMG_3	31	0	-	0	0	.
chr16	73029531	73029532	chr16:73029532:C:A	rs79902773	C	A	C	SOX2_HMG_3	29	0	-	0	0	.
chr16	73053272	73053273	chr16:73053273:C:T	rs1204148454	C	T	C	SOX2_HMG_3	23	0	+	0	0	.
chr16	73485188	73485189	chr16:73485189:T:C	rs8044612	T	C	t	SOX2_HMG_3	-5	0	+	0	0	.
chr16	73568675	73568676	chr16:73568676:C:T	rs137871707	C	T	C	SOX2_HMG_3	17	0	-	0	0	.
chr16	74174049	74174050	chr16:74174050:G:A	rs9929713	G	A	A	SOX2_HMG_3	8	1	-	2.126879778191664	2.998616130827526	AGTCAATGCTTGTGGAA
chr16	74410184	74410185	chr16:74410185:T:A	rs72487951	T	A	.	SOX2_HMG_3	-13	0	+	0	0	.
chr16	74562284	74562285	chr16:74562285:T:A	rs8052389	T	A	A	SOX2_HMG_3	30	0	+	0	0	.
chr16	74562290	74562291	chr16:74562291:G:A	rs8046158	G	A	A	SOX2_HMG_3	36	0	+	0	0	.
chr16	74607379	74607380	chr16:74607380:A:C	rs192265052	A	C	A	SOX2_HMG_3	4	1	+	4.092514463154745	-2.816240316160475	AATCAAGGGAATTGGGG
chr16	74632735	74632736	chr16:74632736:G:C	rs4072450	G	C	C	SOX2_HMG_3	35	0	+	0	0	.
chr16	74708559	74708560	chr16:74708560:A:G	rs73614621	A	G	A	SOX2_HMG_3	-6	0	+	0	0	.
chr16	74708571	74708572	chr16:74708572:T:C	rs73614623	T	C	T	SOX2_HMG_3	6	1	+	3.2035472916487637	-3.705207487666456	AATCGATGTCACTGAAG
chr16	74827674	74827675	chr16:74827675:A:G	rs72794763	A	G	A	SOX2_HMG_3	6	1	-	5.153569134769741	-1.7551856445454794	TCTAAATGTTATTGACA
chr16	75196331	75196332	chr16:75196332:C:T	rs1559362	C	T	C	SOX2_HMG_3	22	0	+	0	0	.
chr16	75212520	75212521	chr16:75212521:C:T	rs9927309	C	T	c	SOX2_HMG_3	-14	0	-	0	0	.
chr16	75310134	75310135	chr16:75310135:T:C	rs145212247	T	C	T	SOX2_HMG_3	-18	0	-	0	0	.
chr16	75312889	75312890	chr16:75312890:C:G	rs1862705	C	G	C	SOX2_HMG_3	25	0	-	0	0	.
chr16	75337845	75337846	chr16:75337846:C:G	rs3863445	C	G	C	SOX2_HMG_3	23	0	-	0	0	.
chr16	75862729	75862730	chr16:75862730:T:G	rs62051619	T	G	T	SOX2_HMG_3	19	0	-	0	0	.
chr16	75864415	75864416	chr16:75864416:A:G	rs4349174	A	G	a	SOX2_HMG_3	30	0	+	0	0	.
chr16	76345477	76345478	chr16:76345478:T:G	rs61368169	T	G	T	SOX2_HMG_3	31	0	-	0	0	.
chr16	76345523	76345524	chr16:76345524:C:T	rs78786642	C	T	C	SOX2_HMG_3	-15	0	-	0	0	.
chr16	76446626	76446627	chr16:76446627:T:C	rs9923889	T	C	C	SOX2_HMG_3	29	0	-	0	0	.
chr16	76446674	76446675	chr16:76446675:G:A	rs9930895	G	A	G	SOX2_HMG_3	7	1	+	4.797990134635869	2.0692030140745334	CAACAATGTCCTTGAGA
chr16	76462233	76462234	chr16:76462234:C:T	rs34782687	C	T	T	SOX2_HMG_3	-2	0	-	0	0	.
chr16	76483492	76483493	chr16:76483493:T:G	rs556221500	T	G	T	SOX2_HMG_3	11	1	-	7.330452189686819	7.330452189686819	GCTCAATGTTAATGAAT
chr16	76487630	76487631	chr16:76487631:T:C	rs12926636	T	C	T	SOX2_HMG_3	-3	0	+	0	0	.
chr16	76823167	76823168	chr16:76823168:C:G	rs144442257	C	G	C	SOX2_HMG_3	24	0	-	0	0	.
chr16	76849059	76849060	chr16:76849060:C:G	rs74443760	C	G	C	SOX2_HMG_3	-15	0	-	0	0	.
chr16	76971255	76971256	chr16:76971256:T:C	rs4321209	T	C	T	SOX2_HMG_3	-8	0	+	0	0	.
chr16	77048635	77048636	chr16:77048636:A:C	rs4888590	A	C	A	SOX2_HMG_3	-5	0	+	0	0	.
chr16	77228045	77228046	chr16:77228046:C:G	rs12449219	C	G	C	SOX2_HMG_3	13	1	-	4.963128797203634	-1.9456259821115864	GATCAATAGACTTGAGT
chr16	77331685	77331686	chr16:77331686:C:G	rs1981983	C	G	G	SOX2_HMG_3	-19	0	+	0	0	.
chr16	77393185	77393186	chr16:77393186:T:G	rs12373077	T	G	G	SOX2_HMG_3	6	1	+	5.875245193115999	-1.0335095861992214	GTTCAATGTCATGGAGT
chr16	77431138	77431139	chr16:77431139:C:G	rs1366545	C	G	G	SOX2_HMG_3	-5	0	+	0	0	.
chr16	77488978	77488979	chr16:77488979:C:G	rs156982	C	G	G	SOX2_HMG_3	-12	0	-	0	0	.
chr16	77500914	77500915	chr16:77500915:T:A	rs11648237	T	A	A	SOX2_HMG_3	-2	0	-	0	0	.
chr16	77520569	77520570	chr16:77520570:A:G	rs1389522	A	G	G	SOX2_HMG_3	15	1	+	3.0646312140906415	2.632157632539741	AACCAGTGGCAGTGAAA
chr16	77684030	77684031	chr16:77684031:C:T	rs12596953	C	T	C	SOX2_HMG_3	-1	0	-	0	0	.
chr16	77684048	77684049	chr16:77684049:C:T	rs118111074	C	T	C	SOX2_HMG_3	-19	0	-	0	0	.
chr16	77703489	77703490	chr16:77703490:G:C	rs8062898	G	C	C	SOX2_HMG_3	3	1	-	1.6012073293332179	-5.307547449982002	TATCAAAGGCAATGAAT
chr16	77780281	77780282	chr16:77780282:T:C	rs12927467	T	C	t	SOX2_HMG_3	-6	0	-	0	0	.
chr16	77951922	77951923	chr16:77951923:T:C	rs369572747	T	C	T	SOX2_HMG_3	10	1	-	3.8034761854816668	-3.105278593833554	TTTCAAAGGAATTGAGT
chr16	77971450	77971451	chr16:77971451:T:G	rs537019003	T	G	T	SOX2_HMG_3	14	1	-	5.172549953752271	-1.6597487518144218	CTTCAATGTTATTTAAC
chr16	78094416	78094417	chr16:78094417:A:G	rs1073111	A	G	A	SOX2_HMG_3	-2	0	+	0	0	.
chr16	78118733	78118734	chr16:78118734:G:C	rs10492874	G	C	C	SOX2_HMG_3	7	1	+	4.616506992311617	-2.1163352191243563	GTTCATTGAAAGTGATA
chr16	78198487	78198488	chr16:78198488:G:A	rs889418	G	A	G	SOX2_HMG_3	-12	0	+	0	0	.
chr16	78238536	78238537	chr16:78238537:A:G	rs148870459	A	G	A	SOX2_HMG_3	-5	0	+	0	0	.
chr16	78286089	78286090	chr16:78286090:A:T	rs56075728	A	T	a	SOX2_HMG_3	28	0	+	0	0	.
chr16	78288450	78288451	chr16:78288451:G:A	rs9938194	G	A	G	SOX2_HMG_3	-5	0	+	0	0	.
chr16	78365285	78365286	chr16:78365286:C:T	rs4888788	C	T	T	SOX2_HMG_3	20	0	+	0	0	.
chr16	78365290	78365291	chr16:78365291:G:A	rs13339056	G	A	G	SOX2_HMG_3	25	0	+	0	0	.
chr16	78389258	78389259	chr16:78389259:C:T	rs75686631	C	T	C	SOX2_HMG_3	-10	0	-	0	0	.
chr16	78624684	78624685	chr16:78624685:T:G	rs72805028	T	G	T	SOX2_HMG_3	-6	0	-	0	0	.
chr16	78683691	78683692	chr16:78683692:A:G	rs7193282	A	G	G	SOX2_HMG_3	32	0	-	0	0	.
chr16	78734547	78734548	chr16:78734548:C:T	rs191340137	C	T	C	SOX2_HMG_3	6	1	-	2.334129281178716	2.334129281178716	TCTCAAGTTCAGTGAGG
chr16	78735724	78735725	chr16:78735725:A:G	rs8046392	A	G	A	SOX2_HMG_3	11	1	+	1.653000154927465	6.928611683939863	GTTCTATGTCAATGATG
chr16	78778406	78778407	chr16:78778407:G:T	rs16948450	G	T	G	SOX2_HMG_3	36	0	-	0	0	.
chr16	78912489	78912490	chr16:78912490:A:G	rs16948847	A	G	A	SOX2_HMG_3	11	1	-	8.607770215396307	1.915078717163961	CAGCAATGCAATTGACA
chr16	78947638	78947639	chr16:78947639:G:A	rs74032448	G	A	A	SOX2_HMG_3	33	0	-	0	0	.
chr16	78955303	78955304	chr16:78955304:G:C	rs11639533	G	C	G	SOX2_HMG_3	-10	0	+	0	0	.
chr16	78955331	78955332	chr16:78955332:C:A	chr16:78955332:C:A	C	A	C	SOX2_HMG_3	18	0	+	0	0	.
chr16	78958036	78958037	chr16:78958037:G:A	rs79548483	G	A	G	SOX2_HMG_3	35	0	-	0	0	.
chr16	79025228	79025229	chr16:79025229:C:G	rs905781	C	G	c	SOX2_HMG_3	35	0	+	0	0	.
chr16	79054065	79054066	chr16:79054066:C:T	rs72795627	C	T	C	SOX2_HMG_3	-7	0	-	0	0	.
chr16	79078040	79078041	chr16:79078041:C:G	rs12716866	C	G	C	SOX2_HMG_3	30	0	+	0	0	.
chr16	79105999	79106000	chr16:79106000:T:A	rs553076343	T	A	T	SOX2_HMG_3	-8	0	+	0	0	.
chr16	79165212	79165213	chr16:79165213:T:C	rs1110544	T	C	T	SOX2_HMG_3	6	1	+	4.179737879024836	-2.729016900290384	TTACAATGCTAGTGACC
chr16	79166580	79166581	chr16:79166581:A:G	rs11150141	A	G	A	SOX2_HMG_3	-1	0	-	0	0	.
chr16	79210827	79210828	chr16:79210828:G:C	rs427883	G	C	C	SOX2_HMG_3	-17	0	+	0	0	.
chr16	79261795	79261796	chr16:79261796:C:G	chr16:79261796:C:G	C	G	C	SOX2_HMG_3	9	1	+	7.179526303855058	1.5468460666920043	AGACAATTTCATTGACA
chr16	79279937	79279938	chr16:79279938:T:C	rs906797	T	C	C	SOX2_HMG_3	-19	0	+	0	0	.
chr16	79327303	79327304	chr16:79327304:C:T	rs1876763	C	T	C	SOX2_HMG_3	35	0	-	0	0	.
chr16	79438956	79438957	chr16:79438957:A:C	rs7190849	A	C	A	SOX2_HMG_3	21	0	-	0	0	.
chr16	79453174	79453175	chr16:79453175:C:A	rs73581316	C	A	A	SOX2_HMG_3	25	0	+	0	0	.
chr16	79470133	79470134	chr16:79470134:G:C	rs532814172	G	C	G	SOX2_HMG_3	-3	0	-	0	0	.
chr16	79492327	79492328	chr16:79492328:A:G	rs80341802	A	G	A	SOX2_HMG_3	9	1	-	4.114933573864116	3.3082634399270687	TATTAATTATAGTGTTG
chr16	79596010	79596011	chr16:79596011:G:C	rs73587068	G	C	G	SOX2_HMG_3	-20	0	+	0	0	.
chr16	79596031	79596032	chr16:79596032:G:A	rs73587069	G	A	A	SOX2_HMG_3	1	1	+	5.13578324339511	6.967430833474401	AGTCAACTTTAGTGAAA
chr16	79759349	79759350	chr16:79759350:G:A	rs115188758	G	A	G	SOX2_HMG_3	30	0	-	0	0	.
chr16	79759363	79759364	chr16:79759364:A:C	rs16951312	A	C	A	SOX2_HMG_3	16	1	-	3.917576797900313	4.720647239676502	CATCAATGTTTCTGATT
chr16	79789489	79789490	chr16:79789490:C:G	rs12149226	C	G	G	SOX2_HMG_3	-11	0	-	0	0	.
chr16	79800346	79800347	chr16:79800347:T:C	rs4889034	T	C	T	SOX2_HMG_3	-1	0	+	0	0	.
chr16	79800363	79800364	chr16:79800364:G:A	rs4889035	G	A	A	SOX2_HMG_3	16	1	+	2.0411920230294687	1.7675044066391972	GCTCAGTTTCAGTGACG
chr16	79933543	79933544	chr16:79933544:G:C	rs74641295	G	C	G	SOX2_HMG_3	0	1	+	1.789135428676311	1.0440685269649883	GTGCATTGGTAGTGAGA
chr16	79959609	79959610	chr16:79959610:G:T	rs4889058	G	T	T	SOX2_HMG_3	11	1	+	4.105521127577979	5.5226010967979295	GGACAATGGAAGTGGGG
chr16	79985507	79985508	chr16:79985508:C:G	rs186531386	C	G	C	SOX2_HMG_3	-10	0	+	0	0	.
chr16	80065745	80065746	chr16:80065746:G:A	rs79371685	G	A	G	SOX2_HMG_3	26	0	-	0	0	.
chr16	80065759	80065760	chr16:80065760:A:C	rs16952225	A	C	A	SOX2_HMG_3	12	1	-	2.840402570176528	-4.068352209138691	ATGCAAAGTCAGTGATG
chr16	80117768	80117769	chr16:80117769:T:C	rs10514481	T	C	T	SOX2_HMG_3	-10	0	-	0	0	.
chr16	80129779	80129780	chr16:80129780:T:C	rs7202741	T	C	T	SOX2_HMG_3	26	0	-	0	0	.
chr16	80307455	80307456	chr16:80307456:C:T	rs72816456	C	T	C	SOX2_HMG_3	8	1	-	10.469200684107143	9.620156736743514	CATAAATGGCATTGATG
chr16	80362428	80362429	chr16:80362429:A:T	rs13339097	A	T	T	SOX2_HMG_3	-11	0	-	0	0	.
chr16	80512075	80512076	chr16:80512076:A:G	rs11150289	A	G	A	SOX2_HMG_3	18	0	+	0	0	.
chr16	80526761	80526762	chr16:80526762:T:C	rs75740027	T	C	T	SOX2_HMG_3	-13	0	+	0	0	.
chr16	80526774	80526775	chr16:80526775:G:C	rs7189437	G	C	G	SOX2_HMG_3	0	1	+	4.269301699428925	3.5242347977176034	GCTAAATGAAATTGAAT
chr16	80528121	80528122	chr16:80528122:C:T	rs13333303	C	T	C	SOX2_HMG_3	-9	0	+	0	0	.
chr16	80719843	80719844	chr16:80719844:A:G	rs3100180	A	G	G	SOX2_HMG_3	20	0	-	0	0	.
chr16	80808033	80808034	chr16:80808034:T:C	rs12446476	T	C	T	SOX2_HMG_3	30	0	+	0	0	.
chr16	80824497	80824498	chr16:80824498:A:G	rs148918736	A	G	A	SOX2_HMG_3	-12	0	+	0	0	.
chr16	80862175	80862176	chr16:80862176:G:T	rs74871482	G	T	G	SOX2_HMG_3	7	1	+	3.9988432522011315	1.9541327474675954	ATTCAAAGTTAGTGTTT
chr16	80927762	80927763	chr16:80927763:A:G	rs2161295	A	G	A	SOX2_HMG_3	0	1	+	3.529187175567661	3.749781454652955	AAACAATGGTGGTGTTA
chr16	81004462	81004463	chr16:81004463:G:C	rs7202452	G	C	G	SOX2_HMG_3	25	0	-	0	0	.
chr16	81004500	81004501	chr16:81004501:A:G	rs2602419	A	G	G	SOX2_HMG_3	-13	0	-	0	0	.
chr16	81080413	81080414	chr16:81080414:G:A	rs16954580	G	A	G	SOX2_HMG_3	7	1	+	8.891981051044754	6.163193930483419	CATCAATGACAGTGGAT
chr16	81136387	81136388	chr16:81136388:C:G	rs12934839	C	G	G	SOX2_HMG_3	-19	0	+	0	0	.
chr16	81139031	81139032	chr16:81139032:G:C	rs12599723	G	C	G	SOX2_HMG_3	3	1	-	4.057032836387457	-2.851721942927764	GCTCAATGCCAGTAATC
chr16	81166618	81166619	chr16:81166619:A:G	rs7194973	A	G	G	SOX2_HMG_3	-9	0	+	0	0	.
chr16	81177308	81177309	chr16:81177309:T:G	rs8049408	T	G	T	SOX2_HMG_3	2	1	+	10.932584873155466	7.0649700384774246	CGTCAATGAAATTGTTG
chr16	81287692	81287693	chr16:81287693:T:G	rs11647597	T	G	T	SOX2_HMG_3	-18	0	-	0	0	.
chr16	81414332	81414333	chr16:81414333:T:C	rs72835164	T	C	T	SOX2_HMG_3	-14	0	-	0	0	.
chr16	81535667	81535668	chr16:81535668:G:A	rs16955523	G	A	G	SOX2_HMG_3	-16	0	-	0	0	.
chr16	81540026	81540027	chr16:81540027:C:T	rs2168798	C	T	C	SOX2_HMG_3	16	1	+	2.474233571201916	3.67100562434227	AAACGATGGCAGTGAAC
chr16	81826595	81826596	chr16:81826596:C:G	rs76424446	C	G	C	SOX2_HMG_3	31	0	+	0	0	.
chr16	81879716	81879717	chr16:81879717:G:C	rs76883178	G	C	G	SOX2_HMG_3	30	0	+	0	0	.
chr16	81943099	81943100	chr16:81943100:T:G	rs4640176	T	G	T	SOX2_HMG_3	19	0	+	0	0	.
chr16	82124673	82124674	chr16:82124674:C:A	rs6564969	C	A	C	SOX2_HMG_3	31	0	-	0	0	.
chr16	82188001	82188002	chr16:82188002:C:G	rs10514534	C	G	C	SOX2_HMG_3	-16	0	+	0	0	.
chr16	82188022	82188023	chr16:82188023:A:G	rs2911407	A	G	A	SOX2_HMG_3	5	1	+	4.473605453844805	-2.435149325470415	TGTCAATGTCACTGTGG
chr16	82197966	82197967	chr16:82197967:C:G	rs142415206	C	G	C	SOX2_HMG_3	-2	0	+	0	0	.
chr16	82197973	82197974	chr16:82197974:A:G	rs2911412	A	G	A	SOX2_HMG_3	5	1	+	9.361393380579413	2.4526386012641908	ATACAATGGCATTGAGG
chr16	82339898	82339899	chr16:82339899:C:G	rs28636900	C	G	C	SOX2_HMG_3	-9	0	-	0	0	.
chr16	82360752	82360753	chr16:82360753:C:T	rs74922812	C	T	C	SOX2_HMG_3	-3	0	-	0	0	.
chr16	82528147	82528148	chr16:82528148:A:T	rs13338627	A	T	A	SOX2_HMG_3	31	0	-	0	0	.
chr16	82677690	82677691	chr16:82677691:G:C	rs1560735	G	C	C	SOX2_HMG_3	16	1	-	2.625107040697473	4.624949535614016	TGTCAGTGCTATTGTAC
chr16	82892388	82892389	chr16:82892389:T:A	rs7192482	T	A	T	SOX2_HMG_3	-20	0	-	0	0	.
chr16	83001467	83001468	chr16:83001468:A:G	rs188559095	A	G	A	SOX2_HMG_3	13	1	-	2.692815271668236	2.692815271668236	GAGCAATGGCATTTTGA
chr16	83015201	83015202	chr16:83015202:T:C	rs10871443	T	C	C	SOX2_HMG_3	18	0	-	0	0	.
chr16	83070693	83070694	chr16:83070694:T:C	rs4783320	T	C	T	SOX2_HMG_3	5	1	-	12.222571886037304	5.313817106722084	CTTCAATGTAATTGAAG
chr16	83070701	83070702	chr16:83070702:A:C	rs8063680	A	C	A	SOX2_HMG_3	-3	0	-	0	0	.
chr16	83390767	83390768	chr16:83390768:G:T	rs1424176	G	T	T	SOX2_HMG_3	0	1	-	5.794977900449792	6.319450523075822	CAGCAATGTGAGTGATT
chr16	83390774	83390775	chr16:83390775:T:A	rs1424177	T	A	T	SOX2_HMG_3	-7	0	-	0	0	.
chr16	83455673	83455674	chr16:83455674:C:G	rs7188758	C	G	C	SOX2_HMG_3	-19	0	+	0	0	.
chr16	83487764	83487765	chr16:83487765:G:A	rs7201978	G	A	G	SOX2_HMG_3	-20	0	+	0	0	.
chr16	83494416	83494417	chr16:83494417:A:G	rs1387370	A	G	A	SOX2_HMG_3	-11	0	-	0	0	.
chr16	83498730	83498731	chr16:83498731:G:A	rs4378602	G	A	G	SOX2_HMG_3	29	0	+	0	0	.
chr16	83563573	83563574	chr16:83563574:G:A	rs12598614	G	A	G	SOX2_HMG_3	9	1	+	4.695390547658591	9.27616557681196	AATCAATGTGCTTGATT
chr16	83672043	83672044	chr16:83672044:T:A	rs8046499	T	A	T	SOX2_HMG_3	6	1	+	9.702539598631704	2.7937848193164827	GATCAATTGTATTTATA
chr16	83750604	83750605	chr16:83750605:C:A	rs411454	C	A	A	SOX2_HMG_3	-6	0	-	0	0	.
chr16	83833494	83833495	chr16:83833495:A:G	rs76361064	A	G	A	SOX2_HMG_3	15	1	-	5.63221339009821	2.7895042339213516	TAGCAATCCCATTGATA
chr16	83833498	83833499	chr16:83833499:A:G	rs75678411	A	G	A	SOX2_HMG_3	11	1	-	5.63221339009821	-1.060478108134137	TAGCAATCCCATTGATA
chr16	83842565	83842566	chr16:83842566:T:C	rs366495	T	C	T	SOX2_HMG_3	-15	0	+	0	0	.
chr16	83907580	83907581	chr16:83907581:T:A	rs9930585	T	A	A	SOX2_HMG_3	10	1	-	2.495296626617483	-4.4134581526977374	GTGCAAAGGTAGTGAAG
chr16	83947067	83947068	chr16:83947068:A:G	rs751142916	A	G	A	SOX2_HMG_3	-1	0	-	0	0	.
chr16	84008284	84008285	chr16:84008285:G:A	rs74032376	G	A	G	SOX2_HMG_3	-11	0	+	0	0	.
chr16	84096680	84096681	chr16:84096681:C:G	rs8049209	C	G	C	SOX2_HMG_3	-17	0	-	0	0	.
chr16	84141621	84141622	chr16:84141622:G:A	rs7184373	G	A	G	SOX2_HMG_3	35	0	-	0	0	.
chr16	84172778	84172779	chr16:84172779:G:A	rs1035558	G	A	G	SOX2_HMG_3	-12	0	-	0	0	.
chr16	84302970	84302971	chr16:84302971:A:G	rs12599383	A	G	A	SOX2_HMG_3	10	1	+	7.979546268438444	1.0707914891232226	TGACAATGACATTGTTG
chr16	84462968	84462969	chr16:84462969:G:A	rs749977357	G	A	G	SOX2_HMG_3	2	1	+	1.4662965596179265	1.4662965596179265	AAGCAGTGTCAGTGTGG
chr16	84508909	84508910	chr16:84508910:C:T	rs35473398	C	T	C	SOX2_HMG_3	-8	0	+	0	0	.
chr16	84518018	84518019	chr16:84518019:C:T	rs28473656	C	T	C	SOX2_HMG_3	7	1	-	3.255969280342355	0.5271821597810195	CCTCAATGACAGCGAGA
chr16	84518020	84518021	chr16:84518021:T:C	rs7203969	T	C	C	SOX2_HMG_3	5	1	-	3.255969280342355	-3.6527854989728654	CCTCAATGACAGCGAGA
chr16	84570236	84570237	chr16:84570237:C:T	rs111728077	C	T	C	SOX2_HMG_3	30	0	+	0	0	.
chr16	84621984	84621985	chr16:84621985:A:T	rs16974299	A	T	A	SOX2_HMG_3	14	1	+	3.124019228194152	0.41124538337985794	TGGCATTGGCATTGAAA
chr16	84737569	84737570	chr16:84737570:C:T	rs17763304	C	T	C	SOX2_HMG_3	-17	0	+	0	0	.
chr16	84826505	84826506	chr16:84826506:G:C	rs72799546	G	C	G	SOX2_HMG_3	6	1	+	6.228254394867104	6.228254394867104	CCTCAAGGGCATTGAAG
chr16	84826533	84826534	chr16:84826534:G:A	rs11645545	G	A	G	SOX2_HMG_3	34	0	+	0	0	.
chr16	84884298	84884299	chr16:84884299:A:G	rs57004720	A	G	G	SOX2_HMG_3	-8	0	+	0	0	.
chr16	84884371	84884372	chr16:84884372:C:T	rs34436844	C	T	T	SOX2_HMG_3	10	1	+	3.788380452871361	3.788380452871361	TGTCAATGCACGTGAAA
chr16	84968461	84968462	chr16:84968462:A:G	rs6564086	A	G	A	SOX2_HMG_3	-13	0	+	0	0	.
chr16	84968479	84968480	chr16:84968480:A:G	rs112022239	A	G	A	SOX2_HMG_3	5	1	+	3.8856786157671985	-3.023076163548022	CATCAACGCCATTGGGG
chr16	84968719	84968720	chr16:84968720:A:G	rs16975038	A	G	A	SOX2_HMG_3	26	0	-	0	0	.
chr16	85002406	85002407	chr16:85002407:A:G	rs8061350	A	G	G	SOX2_HMG_3	-15	0	-	0	0	.
chr16	85016853	85016854	chr16:85016854:G:A	rs74563620	G	A	G	SOX2_HMG_3	21	0	+	0	0	.
chr16	85168363	85168364	chr16:85168364:C:T	rs4636894	C	T	T	SOX2_HMG_3	-11	0	-	0	0	.
chr16	85200621	85200622	chr16:85200622:G:A	rs115786682	G	A	G	SOX2_HMG_3	9	1	-	4.670044526361657	5.476714660298703	ATTCATTGTCAGTGAAT
chr16	85220552	85220553	chr16:85220553:G:A	rs555303892	G	A	G	SOX2_HMG_3	-1	0	-	0	0	.
chr16	85234691	85234692	chr16:85234692:T:C	rs112970434	T	C	T	SOX2_HMG_3	10	1	-	3.3117025470470365	-3.597052232268184	GGTCAAGGGCAGTGTGA
chr16	85310421	85310422	chr16:85310422:T:A	chr16:85310422:T:A	T	A	T	SOX2_HMG_3	23	0	+	0	0	.
chr16	85414331	85414332	chr16:85414332:A:G	rs6564118	A	G	G	SOX2_HMG_3	-15	0	-	0	0	.
chr16	85452682	85452683	chr16:85452683:C:G	rs4782704	C	G	C	SOX2_HMG_3	11	1	-	2.4714582592273806	-2.8041532697850178	CCTGAATTTCAGTGAGG
chr16	85578285	85578286	chr16:85578286:C:T	rs12102555	C	T	T	SOX2_HMG_3	24	0	-	0	0	.
chr16	85579010	85579011	chr16:85579011:A:G	rs9937814	A	G	A	SOX2_HMG_3	5	1	+	8.77371990620782	1.864965126892599	AATCAATGTCAGTGGGC
chr16	85614267	85614268	chr16:85614268:C:A	rs567147843	C	A	C	SOX2_HMG_3	-17	0	+	0	0	.
chr16	85709880	85709881	chr16:85709881:G:A	rs113997296	G	A	G	SOX2_HMG_3	-5	0	-	0	0	.
chr16	85846732	85846733	chr16:85846733:G:A	rs7200652	G	A	A	SOX2_HMG_3	-5	0	-	0	0	.
chr16	85985480	85985481	chr16:85985481:T:A	rs13330176	T	A	T	SOX2_HMG_3	24	0	+	0	0	.
chr16	85986657	85986658	chr16:85986658:C:G	chr16:85986658:C:G	C	G	C	SOX2_HMG_3	25	0	+	0	0	.
chr16	86028064	86028065	chr16:86028065:A:G	rs28395189	A	G	A	SOX2_HMG_3	34	0	-	0	0	.
chr16	86048782	86048783	chr16:86048783:A:G	rs35781150	A	G	G	SOX2_HMG_3	-14	0	-	0	0	.
chr16	86078266	86078267	chr16:86078267:C:T	rs7203577	C	T	T	SOX2_HMG_3	-2	0	+	0	0	.
chr16	86086473	86086474	chr16:86086474:A:G	rs12918215	A	G	A	SOX2_HMG_3	10	1	-	1.1354098864105027	1.1354098864105027	CATCAATGCCTGAGATA
chr16	86194358	86194359	chr16:86194359:A:T	rs276975	A	T	A	SOX2_HMG_3	-8	0	+	0	0	.
chr16	86242163	86242164	chr16:86242164:T:C	rs1704505	T	C	C	SOX2_HMG_3	5	1	-	2.2210305770832015	-4.687724202232019	TGTCTATGTAAGTGTAG
chr16	86243053	86243054	chr16:86243054:C:A	rs1181796701	C	A	C	SOX2_HMG_3	24	0	+	0	0	.
chr16	86290110	86290111	chr16:86290111:T:C	rs13335682	T	C	C	SOX2_HMG_3	-4	0	+	0	0	.
chr16	86356353	86356354	chr16:86356354:C:T	rs1728365	C	T	T	SOX2_HMG_3	-18	0	+	0	0	.
chr16	86356432	86356433	chr16:86356433:G:A	rs1490864	G	A	G	SOX2_HMG_3	1	1	+	1.391322537834069	3.222970127913359	CGCCAATGCCCTTGAAA
chr16	86513280	86513281	chr16:86513281:T:C	rs7185244	T	C	C	SOX2_HMG_3	-12	0	+	0	0	.
chr16	86520330	86520331	chr16:86520331:T:C	rs184014342	T	C	T	SOX2_HMG_3	-2	0	-	0	0	.
chr16	86520339	86520340	chr16:86520340:T:C	rs113715640	T	C	T	SOX2_HMG_3	-11	0	-	0	0	.
chr16	86586921	86586922	chr16:86586922:A:T	rs7192043	A	T	T	SOX2_HMG_3	-6	0	+	0	0	.
chr16	86692503	86692504	chr16:86692504:A:G	rs9889093	A	G	A	SOX2_HMG_3	-13	0	+	0	0	.
chr16	86720969	86720970	chr16:86720970:A:G	rs72804582	A	G	A	SOX2_HMG_3	2	1	-	6.153963207892161	1.1505911375765736	GATCAATATATGTGATG
chr16	86733843	86733844	chr16:86733844:A:T	rs80087248	A	T	A	SOX2_HMG_3	4	1	+	3.7366696992674906	-3.172085080047729	AAGCAATTCTAGTCATG
chr16	86733853	86733854	chr16:86733854:A:G	rs79504021	A	G	A	SOX2_HMG_3	14	1	+	3.7366696992674906	-0.4452079180336288	AAGCAATTCTAGTCATG
chr16	86740826	86740827	chr16:86740827:G:A	rs1899882	G	A	A	SOX2_HMG_3	13	1	+	3.116486430997862	-3.7922683483173576	AACCAATGGAAATGAAT
chr16	86793921	86793922	chr16:86793922:G:A	rs8055182	G	A	G	SOX2_HMG_3	-5	0	+	0	0	.
chr16	86793938	86793939	chr16:86793939:T:C	rs147720058	T	C	T	SOX2_HMG_3	12	1	+	3.952320840774117	-2.9564339385411045	CATCAATCTTAGTGGAT
chr16	86809538	86809539	chr16:86809539:T:C	rs192730066	T	C	T	SOX2_HMG_3	12	1	+	2.3529614319283287	-4.555793347386892	GGTCAAATGCATTGGTT
chr16	86837008	86837009	chr16:86837009:A:G	rs60237287	A	G	A	SOX2_HMG_3	-12	0	+	0	0	.
chr16	86942956	86942957	chr16:86942957:T:C	rs4575542	T	C	T	SOX2_HMG_3	11	1	+	9.89623878988111	3.2035472916487637	AATCCATGTCATTGAAG
chr16	86948148	86948149	chr16:86948149:A:G	rs77099230	A	G	A	SOX2_HMG_3	12	1	-	2.777262389853742	-4.131492389461478	GCTCAATTCCTGTGAAG
chr16	86955741	86955742	chr16:86955742:G:A	rs11647668	G	A	G	SOX2_HMG_3	-12	0	-	0	0	.
chr16	86997508	86997509	chr16:86997509:C:T	rs8054646	C	T	T	SOX2_HMG_3	-12	0	-	0	0	.
chr16	87150145	87150146	chr16:87150146:T:C	rs62040432	T	C	C	SOX2_HMG_3	10	1	-	3.3608786117489933	-3.5478761675662263	GAGCAAATGCATTGAGA
chr16	87230927	87230928	chr16:87230928:G:A	rs4843231	G	A	G	SOX2_HMG_3	13	1	+	2.7470566918616823	-4.161698087453537	GGACAATTTTATGGAGG
chr16	87265725	87265726	chr16:87265726:T:C	rs2059883	T	C	C	SOX2_HMG_3	32	0	-	0	0	.
chr16	87316979	87316980	chr16:87316980:G:C	rs146038096	G	C	G	SOX2_HMG_3	22	0	+	0	0	.
chr16	87327786	87327787	chr16:87327787:G:A	rs2278270	G	A	G	SOX2_HMG_3	18	0	-	0	0	.
chr16	87468886	87468887	chr16:87468887:T:C	rs9927618	T	C	T	SOX2_HMG_3	16	1	-	3.277310365123287	3.5509979815135586	ACTCAATATTAGGGAAA
chr16	87477387	87477388	chr16:87477388:C:T	rs118179234	C	T	C	SOX2_HMG_3	-12	0	-	0	0	.
chr16	87715808	87715809	chr16:87715809:G:T	rs6540069	G	T	G	SOX2_HMG_3	18	0	-	0	0	.
chr16	87715834	87715835	chr16:87715835:C:T	rs4843259	C	T	C	SOX2_HMG_3	-8	0	-	0	0	.
chr16	87717579	87717580	chr16:87717580:C:A	rs8054180	C	A	A	SOX2_HMG_3	9	1	+	7.053304771207644	6.00139956319796	GTGCAATTCCAGTGATG
chr16	87816063	87816064	chr16:87816064:T:C	rs4843706	T	C	C	SOX2_HMG_3	-8	0	-	0	0	.
chr16	88131145	88131146	chr16:88131146:A:G	rs75435628	A	G	-	SOX2_HMG_3	26	0	+	0	0	.
chr16	88210959	88210960	chr16:88210960:C:T	rs79490713	C	T	-	SOX2_HMG_3	16	1	+	1.1657977367469095	2.3625697898872633	GCTCATTGGTATTGGGC
chr16	88268314	88268315	chr16:88268315:A:G	rs59842012	A	G	-	SOX2_HMG_3	15	1	-	10.106163770455588	7.263454614278729	AGTCAATGTTGTTGATG
chr16	88352201	88352202	chr16:88352202:C:T	rs565731568	C	T	c	SOX2_HMG_3	21	0	-	0	0	.
chr16	88366773	88366774	chr16:88366774:G:A	rs1031440937	G	A	-	SOX2_HMG_3	33	0	-	0	0	.
chr16	88369298	88369299	chr16:88369299:G:A	rs921144752	G	A	g	SOX2_HMG_3	-2	0	-	0	0	.
chr16	88372313	88372314	chr16:88372314:C:A	rs1017447238	C	A	-	SOX2_HMG_3	-16	0	-	0	0	.
chr16	88568901	88568902	chr16:88568902:A:G	rs11646848	A	G	G	SOX2_HMG_3	9	1	-	5.144526503529896	4.337856369592849	AAACAATGTTAGTTAAA
chr16	88725638	88725639	chr16:88725639:A:G	rs4782430	A	G	G	SOX2_HMG_3	-2	0	+	0	0	.
chr16	88730249	88730250	chr16:88730250:A:G	rs9972645	A	G	G	SOX2_HMG_3	20	0	+	0	0	.
chr16	88760145	88760146	chr16:88760146:C:T	rs536669610	C	T	C	SOX2_HMG_3	36	0	-	0	0	.
chr16	88770681	88770682	chr16:88770682:C:G	rs116225637	C	G	C	SOX2_HMG_3	8	1	-	6.51004331071721	5.775774877946008	AGTCACTGGCAGTGAAG
chr16	89054220	89054221	chr16:89054221:G:A	rs8055556	G	A	G	SOX2_HMG_3	35	0	-	0	0	.
chr16	89054266	89054267	chr16:89054267:T:G	rs8043850	T	G	G	SOX2_HMG_3	-11	0	-	0	0	.
chr16	89094328	89094329	chr16:89094329:C:T	rs74036104	C	T	C	SOX2_HMG_3	8	1	-	2.8396946954178808	1.9906507480542524	GAGAAATGGAAGTGAAT
chr16	89094338	89094339	chr16:89094339:T:C	rs9940871	T	C	T	SOX2_HMG_3	-2	0	-	0	0	.
chr16	89159200	89159201	chr16:89159201:T:G	rs72819325	T	G	T	SOX2_HMG_3	-9	0	-	0	0	.
chr16	89187538	89187539	chr16:89187539:C:T	rs376519064	C	T	C	SOX2_HMG_3	-2	0	-	0	0	.
chr16	89343864	89343865	chr16:89343865:A:C	rs149251417	A	C	A	SOX2_HMG_3	12	1	-	0.6654837710885505	-6.243271008226669	GGTCCATGGGAGTGAGG
chr16	89386746	89386747	chr16:89386747:T:G	rs3096297	T	G	G	SOX2_HMG_3	-9	0	-	0	0	.
chr16	89454043	89454044	chr16:89454044:A:G	rs2965949	A	G	G	SOX2_HMG_3	35	0	-	0	0	.
chr16	89454052	89454053	chr16:89454053:A:T	rs578066839	A	T	A	SOX2_HMG_3	26	0	-	0	0	.
chr16	89548924	89548925	chr16:89548925:C:T	rs67643661	C	T	T	SOX2_HMG_3	-12	0	+	0	0	.
chr16	89689494	89689495	chr16:89689495:A:G	rs258322	A	G	G	SOX2_HMG_3	6	1	-	3.593979366808597	-3.3147754125066227	GTACAATGTTTGTGATA
chr16	90040688	90040689	chr16:90040689:A:G	rs9922171	A	G	G	SOX2_HMG_3	35	0	-	0	0	.
chr16	90044380	90044381	chr16:90044381:A:G	rs3743816	A	G	A	SOX2_HMG_3	23	0	+	0	0	.
chr16	90044389	90044390	chr16:90044390:C:T	rs74583214	C	T	C	SOX2_HMG_3	32	0	+	0	0	.
chr16	90081988	90081989	chr16:90081989:C:G	rs62054659	C	G	.	SOX2_HMG_3	3	1	+	1.1022591965024118	-5.806495582812808	GATCAAGGCATGTGATG
chr17	142788	142789	chr17:142789:T:A	rs905159635	T	A	.	SOX2_HMG_3	-12	0	-	0	0	.
chr17	259908	259909	chr17:259909:A:G	rs7224163	A	G	A	SOX2_HMG_3	-3	0	-	0	0	.
chr17	314495	314496	chr17:314496:A:G	rs71372196	A	G	-	SOX2_HMG_3	19	0	-	0	0	.
chr17	314503	314504	chr17:314504:C:T	rs916599346	C	T	-	SOX2_HMG_3	11	1	-	1.4968547644917016	-3.7787567645206965	GGTCAATGGACGTGGAG
chr17	314553	314554	chr17:314554:T:C	rs9907764	T	C	-	SOX2_HMG_3	-8	0	-	0	0	.
chr17	314749	314750	chr17:314750:C:G	rs1167995230	C	G	-	SOX2_HMG_3	8	1	-	1.4968547644917016	0.7625863317205004	GGTCAATGGAGGTGGAG
chr17	314791	314792	chr17:314792:T:C	rs1369511201	T	C	-	SOX2_HMG_3	27	0	-	0	0	.
chr17	315122	315123	chr17:315123:T:C	rs1036388043	T	C	-	SOX2_HMG_3	27	0	-	0	0	.
chr17	315355	315356	chr17:315356:T:C	rs62053759	T	C	-	SOX2_HMG_3	10	1	-	1.4968547644917007	-5.4119000148235195	GGTCAGTGGAAGTGGAG
chr17	315381	315382	chr17:315382:C:A	rs71283540	C	A	C	SOX2_HMG_3	14	1	-	1.0643811829408008	2.533484955427626	GGTCAATGGAGGTGGGG
chr17	315423	315424	chr17:315424:G:A	rs369795557	G	A	G	SOX2_HMG_3	3	1	-	1.0643811829408008	-5.844373596374419	GGTCAATGGAGGTGGGG
chr17	315448	315449	chr17:315449:C:G	rs74596012	C	G	C	SOX2_HMG_3	8	1	-	5.24625880024192	4.511990367470719	GGTCAATGGAGGTGAGG
chr17	315455	315456	chr17:315456:C:T	rs62054961	C	T	C	SOX2_HMG_3	1	1	-	5.24625880024192	7.0779063903212105	GGTCAATGGAGGTGAGG
chr17	315523	315524	chr17:315524:G:A	rs71355221	G	A	G	SOX2_HMG_3	-5	0	-	0	0	.
chr17	315701	315702	chr17:315702:T:C	rs1226326370	T	C	-	SOX2_HMG_3	-1	0	-	0	0	.
chr17	315719	315720	chr17:315720:C:T	rs77449063	C	T	-	SOX2_HMG_3	-19	0	-	0	0	.
chr17	316628	316629	chr17:316629:C:G	rs112818877	C	G	-	SOX2_HMG_3	16	1	-	1.4968547644917016	-0.502987730424842	GGTCAATGGAGGTGGAG
chr17	317185	317186	chr17:317186:T:G	rs1224141537	T	G	-	SOX2_HMG_3	5	1	-	1.4968547644917016	-5.4119000148235195	GGTCAATGGAGGTGGAG
chr17	317439	317440	chr17:317440:G:T	rs116584068	G	T	-	SOX2_HMG_3	-5	0	-	0	0	.
chr17	1057908	1057909	chr17:1057909:T:A	rs9912632	T	A	T	SOX2_HMG_3	27	0	-	0	0	.
chr17	1180789	1180790	chr17:1180790:G:C	rs73975666	G	C	G	SOX2_HMG_3	11	1	+	0.5528692570428912	-4.722742271969507	GCCCAAGGGCAGTGAAG
chr17	1459985	1459986	chr17:1459986:T:G	rs7211083	T	G	T	SOX2_HMG_3	0	1	-	4.339011279097267	3.814538656471239	AATCAATGTTAGCGGTC
chr17	1622275	1622276	chr17:1622276:C:A	rs79735563	C	A	C	SOX2_HMG_3	34	0	+	0	0	.
chr17	1897894	1897895	chr17:1897895:C:T	rs1131636	C	T	N	SOX2_HMG_3	15	1	-	4.0144413674860795	4.44691494903698	CATTAATTGAAGTGAGA
chr17	2124198	2124199	chr17:2124199:G:T	rs16951935	G	T	G	SOX2_HMG_3	-15	0	+	0	0	.
chr17	2136438	2136439	chr17:2136439:T:C	rs9909515	T	C	C	SOX2_HMG_3	23	0	-	0	0	.
chr17	2194288	2194289	chr17:2194289:T:G	rs1002135	T	G	G	SOX2_HMG_3	6	1	+	2.711917012217533	-4.196837767097688	ACTCAATGTTCTTGGAT
chr17	2231707	2231708	chr17:2231708:A:T	rs12452089	A	T	A	SOX2_HMG_3	-16	0	+	0	0	.
chr17	2661714	2661715	chr17:2661715:T:C	rs8081803	T	C	T	SOX2_HMG_3	-11	0	+	0	0	.
chr17	2736067	2736068	chr17:2736068:G:A	rs16952349	G	A	G	SOX2_HMG_3	32	0	-	0	0	.
chr17	2885878	2885879	chr17:2885879:C:A	rs117515699	C	A	C	SOX2_HMG_3	7	1	-	3.9139771057394586	1.8692666010059213	CATCAATGTCAATAATG
chr17	2891561	2891562	chr17:2891562:A:G	rs9907411	A	G	A	SOX2_HMG_3	-6	0	-	0	0	.
chr17	3560895	3560896	chr17:3560896:G:A	rs60292929	G	A	g	SOX2_HMG_3	30	0	+	0	0	.
chr17	3935422	3935423	chr17:3935423:T:C	rs8068346	T	C	T	SOX2_HMG_3	6	1	+	1.1299308122915581	-5.77882396702366	CCTCGATGCCAGTGGTG
chr17	4186900	4186901	chr17:4186901:G:A	rs34188453	G	A	G	SOX2_HMG_3	33	0	-	0	0	.
chr17	4186906	4186907	chr17:4186907:A:G	rs78871641	A	G	A	SOX2_HMG_3	27	0	-	0	0	.
chr17	4304593	4304594	chr17:4304594:A:C	rs148560560	A	C	A	SOX2_HMG_3	-4	0	-	0	0	.
chr17	4405781	4405782	chr17:4405782:C:T	rs35074337	C	T	C	SOX2_HMG_3	34	0	+	0	0	.
chr17	4648266	4648267	chr17:4648267:C:T	rs749302	C	T	C	SOX2_HMG_3	13	1	-	2.1918214809639363	-4.716933298351284	GGGCAATGGTAGAGTTG
chr17	4722790	4722791	chr17:4722791:C:T	rs67966027	C	T	C	SOX2_HMG_3	-6	0	+	0	0	.
chr17	4904699	4904700	chr17:4904700:C:T	rs2661697	C	T	t	SOX2_HMG_3	20	0	+	0	0	.
chr17	4949167	4949168	chr17:4949168:C:T	rs4790714	C	T	C	SOX2_HMG_3	6	1	-	1.8071326738674243	1.8071326738674243	AATCAAGGGTGGTGAGG
chr17	5365836	5365837	chr17:5365837:G:A	rs8081520	G	A	G	SOX2_HMG_3	-18	0	+	0	0	.
chr17	5543867	5543868	chr17:5543868:C:T	rs34031227	C	T	T	SOX2_HMG_3	-15	0	+	0	0	.
chr17	5631724	5631725	chr17:5631725:G:A	rs2255534	G	A	G	SOX2_HMG_3	-12	0	+	0	0	.
chr17	5631744	5631745	chr17:5631745:A:G	rs2175826	A	G	G	SOX2_HMG_3	8	1	+	2.0393888899196666	2.8884328372832955	GATCAAAGACTGTGATG
chr17	5632223	5632224	chr17:5632224:T:C	rs2670645	T	C	T	SOX2_HMG_3	12	1	+	1.864768116421812	-5.043986662893408	AATGGATGGCAGTGATT
chr17	5662142	5662143	chr17:5662143:G:A	rs7221898	G	A	A	SOX2_HMG_3	2	1	-	1.8277319829773329	6.831104053292919	GACCATTGCTATTGGTA
chr17	5824801	5824802	chr17:5824802:C:T	rs9907625	C	T	T	SOX2_HMG_3	-7	0	-	0	0	.
chr17	5832957	5832958	chr17:5832958:T:G	rs6502887	T	G	t	SOX2_HMG_3	-16	0	+	0	0	.
chr17	5907094	5907095	chr17:5907095:C:T	rs8080397	C	T	C	SOX2_HMG_3	1	1	-	4.237728910917829	6.0693765009971195	GGGCAGTGATATTGAAG
chr17	6101318	6101319	chr17:6101319:T:C	rs4362439	T	C	T	SOX2_HMG_3	-12	0	-	0	0	.
chr17	6105736	6105737	chr17:6105737:C:T	rs747522493	C	T	C	SOX2_HMG_3	0	1	+	3.340334999183113	3.2030060211344487	CATCAACGTCAGTGGGG
chr17	6160451	6160452	chr17:6160452:G:A	rs139579510	G	A	G	SOX2_HMG_3	-15	0	-	0	0	.
chr17	6232720	6232721	chr17:6232721:A:G	rs8078484	A	G	A	SOX2_HMG_3	-9	0	+	0	0	.
chr17	6240626	6240627	chr17:6240627:G:A	rs575093873	G	A	G	SOX2_HMG_3	-1	0	-	0	0	.
chr17	6413241	6413242	chr17:6413242:A:G	rs56161371	A	G	A	SOX2_HMG_3	-1	0	+	0	0	.
chr17	6559467	6559468	chr17:6559468:A:T	rs190960858	A	T	A	SOX2_HMG_3	30	0	+	0	0	.
chr17	6566184	6566185	chr17:6566185:C:T	rs4796513	C	T	C	SOX2_HMG_3	19	0	-	0	0	.
chr17	6645409	6645410	chr17:6645410:G:A	rs7214691	G	A	G	SOX2_HMG_3	16	1	+	2.112927942692458	1.8392403263021866	AAGCAATGACACTGTGG
chr17	6753406	6753407	chr17:6753407:A:G	rs1983179	A	G	G	SOX2_HMG_3	-13	0	+	0	0	.
chr17	6753430	6753431	chr17:6753431:G:A	rs76444677	G	A	G	SOX2_HMG_3	11	1	+	7.026026682610597	1.7504151535981993	GATTAATAATAGTGATG
chr17	6753454	6753455	chr17:6753455:C:T	rs1983180	C	T	T	SOX2_HMG_3	35	0	+	0	0	.
chr17	7026232	7026233	chr17:7026233:T:C	rs4993974	T	C	T	SOX2_HMG_3	5	1	-	6.044166903816645	-0.8645878754985763	CTTCAATAGCAGTGGTG
chr17	7208891	7208892	chr17:7208892:C:T	rs73976745	C	T	C	SOX2_HMG_3	29	0	-	0	0	.
chr17	7208930	7208931	chr17:7208931:C:G	rs72837699	C	G	C	SOX2_HMG_3	-10	0	-	0	0	.
chr17	7367034	7367035	chr17:7367035:C:T	rs11655314	C	T	T	SOX2_HMG_3	26	0	-	0	0	.
chr17	7548526	7548527	chr17:7548527:C:T	rs62059803	C	T	C	SOX2_HMG_3	-12	0	+	0	0	.
chr17	7552616	7552617	chr17:7552617:T:C	rs4968208	T	C	C	SOX2_HMG_3	-12	0	+	0	0	.
chr17	7834680	7834681	chr17:7834681:G:C	rs7208787	G	C	G	SOX2_HMG_3	34	0	-	0	0	.
chr17	7834696	7834697	chr17:7834697:C:T	rs73232396	C	T	C	SOX2_HMG_3	18	0	-	0	0	.
chr17	7834707	7834708	chr17:7834708:C:T	rs73977766	C	T	C	SOX2_HMG_3	7	1	-	0.6724535099677313	-2.056333610593604	GGGCCATGGCATTGACC
chr17	8322449	8322450	chr17:8322450:A:G	rs1045172	A	G	A	SOX2_HMG_3	15	1	+	2.234400114597716	1.801926533046815	TGTCCATGACATTGGAG
chr17	8412853	8412854	chr17:8412854:C:A	rs9895315	C	A	A	SOX2_HMG_3	-10	0	-	0	0	.
chr17	8429279	8429280	chr17:8429280:G:A	rs937479	G	A	G	SOX2_HMG_3	6	1	-	2.6365376538835728	9.545292433198792	CTTCAACGAAAGTGAAA
chr17	8613946	8613947	chr17:8613947:T:C	rs11652442	T	C	C	SOX2_HMG_3	32	0	-	0	0	.
chr17	8714047	8714048	chr17:8714048:C:G	rs4451989	C	G	C	SOX2_HMG_3	31	0	-	0	0	.
chr17	8728978	8728979	chr17:8728979:A:G	rs4791748	A	G	G	SOX2_HMG_3	12	1	-	2.4893692904278133	-4.419385488887407	ACTCAACTCAATTGAGG
chr17	8729010	8729011	chr17:8729011:C:T	rs4791749	C	T	C	SOX2_HMG_3	-20	0	-	0	0	.
chr17	8784532	8784533	chr17:8784533:G:A	rs1553072	G	A	G	SOX2_HMG_3	-17	0	-	0	0	.
chr17	8915767	8915768	chr17:8915768:G:A	rs117629234	G	A	G	SOX2_HMG_3	0	1	-	1.7782163997081102	1.6408874216594458	CATCCATTACAGTGTGG
chr17	9188103	9188104	chr17:9188104:A:G	rs4791343	A	G	g	SOX2_HMG_3	18	0	-	0	0	.
chr17	9299030	9299031	chr17:9299031:C:T	rs2429370	C	T	c	SOX2_HMG_3	25	0	-	0	0	.
chr17	9410158	9410159	chr17:9410159:A:C	rs62067153	A	C	A	SOX2_HMG_3	12	1	-	3.3506500946467503	-3.55810468466847	AATCCATGCCATTCATG
chr17	9431988	9431989	chr17:9431989:A:T	rs6503201	A	T	A	SOX2_HMG_3	-15	0	+	0	0	.
chr17	9509767	9509768	chr17:9509768:C:T	rs4791848	C	T	C	SOX2_HMG_3	-14	0	+	0	0	.
chr17	9576358	9576359	chr17:9576359:A:C	rs6503231	A	C	A	SOX2_HMG_3	22	0	-	0	0	.
chr17	9576362	9576363	chr17:9576363:T:A	rs117620514	T	A	T	SOX2_HMG_3	18	0	-	0	0	.
chr17	9646796	9646797	chr17:9646797:G:A	rs74332578	G	A	G	SOX2_HMG_3	-7	0	+	0	0	.
chr17	9814316	9814317	chr17:9814317:T:C	rs16958824	T	C	C	SOX2_HMG_3	-19	0	-	0	0	.
chr17	10095466	10095467	chr17:10095467:C:T	rs147406590	C	T	C	SOX2_HMG_3	29	0	-	0	0	.
chr17	10095468	10095469	chr17:10095469:G:A	chr17:10095469:G:A	G	A	G	SOX2_HMG_3	27	0	-	0	0	.
chr17	10429918	10429919	chr17:10429919:C:T	rs7215212	C	T	C	SOX2_HMG_3	-3	0	+	0	0	.
chr17	10630851	10630852	chr17:10630852:G:A	rs12451903	G	A	G	SOX2_HMG_3	26	0	+	0	0	.
chr17	10809064	10809065	chr17:10809065:T:G	rs7214355	T	G	T	SOX2_HMG_3	18	0	-	0	0	.
chr17	10915286	10915287	chr17:10915287:T:C	rs9907876	T	C	T	SOX2_HMG_3	6	1	+	1.1323711070957014	-5.776383672219519	CATCCATGGTATGGAAC
chr17	11004458	11004459	chr17:11004459:A:C	rs62060872	A	C	A	SOX2_HMG_3	28	0	-	0	0	.
chr17	11024280	11024281	chr17:11024281:A:G	rs8078061	A	G	A	SOX2_HMG_3	10	1	+	2.6672242145514065	-4.2415305647638135	GGGCAGTTGCATTGATT
chr17	11031561	11031562	chr17:11031562:T:C	rs79703440	T	C	T	SOX2_HMG_3	33	0	-	0	0	.
chr17	11194154	11194155	chr17:11194155:G:A	rs1022460643	G	A	G	SOX2_HMG_3	-19	0	+	0	0	.
chr17	11218665	11218666	chr17:11218666:C:T	rs9904109	C	T	T	SOX2_HMG_3	-17	0	-	0	0	.
chr17	11275050	11275051	chr17:11275051:T:G	rs11655516	T	G	T	SOX2_HMG_3	34	0	+	0	0	.
chr17	11493059	11493060	chr17:11493060:C:T	rs2908977	C	T	C	SOX2_HMG_3	0	1	-	8.02855182558593	7.807957546500637	GATAAATGTTAGTGTTG
chr17	11518944	11518945	chr17:11518945:C:T	rs2969205	C	T	T	SOX2_HMG_3	-9	0	+	0	0	.
chr17	11629974	11629975	chr17:11629975:A:G	rs7208472	A	G	A	SOX2_HMG_3	-13	0	+	0	0	.
chr17	12090213	12090214	chr17:12090214:A:G	rs78094876	A	G	A	SOX2_HMG_3	-2	0	-	0	0	.
chr17	12288033	12288034	chr17:12288034:A:C	rs12453677	A	C	A	SOX2_HMG_3	35	0	-	0	0	.
chr17	12497791	12497792	chr17:12497792:C:G	rs16946148	C	G	C	SOX2_HMG_3	13	1	-	1.5573609387643985	-5.351393840550822	GCTCAAGGGAAGTGGTG
chr17	13018404	13018405	chr17:13018405:G:A	rs76048435	G	A	G	SOX2_HMG_3	-16	0	+	0	0	.
chr17	13200868	13200869	chr17:13200869:T:C	rs73980310	T	C	C	SOX2_HMG_3	5	1	-	4.048707420343632	-2.860047358971588	ACTCCATGAAATTGAAT
chr17	13200883	13200884	chr17:13200884:T:C	rs73980311	T	C	T	SOX2_HMG_3	-10	0	-	0	0	.
chr17	13418062	13418063	chr17:13418063:A:G	rs76850433	A	G	A	SOX2_HMG_3	4	1	+	1.6638710378298116	-5.244883741485406	TGTCATTGCTTTTGATG
chr17	13476124	13476125	chr17:13476125:A:T	rs75714887	A	T	A	SOX2_HMG_3	-15	0	-	0	0	.
chr17	13862422	13862423	chr17:13862423:T:C	rs148894225	T	C	T	SOX2_HMG_3	0	1	-	3.794154144502937	4.01474842358823	AATAAATGTTGTTGAAG
chr17	14042484	14042485	chr17:14042485:G:T	rs8077837	G	T	t	SOX2_HMG_3	-12	0	+	0	0	.
chr17	14144159	14144160	chr17:14144160:G:A	rs11652402	G	A	G	SOX2_HMG_3	-19	0	+	0	0	.
chr17	14290876	14290877	chr17:14290877:T:G	rs6502343	T	G	T	SOX2_HMG_3	4	1	-	4.1969763651237795	-2.7117784141914405	AGGCAATGTCATGGAAG
chr17	14311556	14311557	chr17:14311557:T:C	rs67497521	T	C	T	SOX2_HMG_3	-15	0	+	0	0	.
chr17	14311588	14311589	chr17:14311589:T:G	rs9904614	T	G	T	SOX2_HMG_3	17	0	+	0	0	.
chr17	14373039	14373040	chr17:14373040:C:A	rs12450665	C	A	C	SOX2_HMG_3	-18	0	+	0	0	.
chr17	14387222	14387223	chr17:14387223:A:G	rs16949426	A	G	A	SOX2_HMG_3	1	1	+	2.2841570136343514	0.4525094235550603	TAGCAATAGCAATGAGG
chr17	14435385	14435386	chr17:14435386:A:G	rs4239128	A	G	G	SOX2_HMG_3	10	1	+	6.707029343074199	-0.2017254362410219	TTACAATGCCAGTGAAA
chr17	14451404	14451405	chr17:14451405:T:G	rs7214552	T	G	G	SOX2_HMG_3	34	0	+	0	0	.
chr17	14644896	14644897	chr17:14644897:G:A	rs12946501	G	A	G	SOX2_HMG_3	4	1	-	2.2606161911923808	2.2606161911923808	TATTCATGCTATTGAAG
chr17	14661705	14661706	chr17:14661706:T:C	rs11657986	T	C	T	SOX2_HMG_3	6	1	+	5.243006420587688	-1.6657483587275326	CCTCATTGGCAGTGATT
chr17	14918734	14918735	chr17:14918735:G:A	rs1016144	G	A	A	SOX2_HMG_3	27	0	-	0	0	.
chr17	14919675	14919676	chr17:14919676:C:T	rs147566818	C	T	C	SOX2_HMG_3	-11	0	+	0	0	.
chr17	15089160	15089161	chr17:15089161:C:A	rs12936246	C	A	A	SOX2_HMG_3	7	1	-	2.896793622882659	0.8520831181491226	AATCAACGTAATGGATA
chr17	15263667	15263668	chr17:15263668:T:C	rs231016	T	C	T	SOX2_HMG_3	-13	0	-	0	0	.
chr17	15271207	15271208	chr17:15271208:T:C	rs59753475	T	C	T	SOX2_HMG_3	5	1	-	1.1223874924684403	-5.7863672868467795	CATAAATGTCAGTGCAG
chr17	15308457	15308458	chr17:15308458:C:A	rs3760305	C	A	C	SOX2_HMG_3	35	0	+	0	0	.
chr17	15326125	15326126	chr17:15326126:G:A	rs401664	G	A	G	SOX2_HMG_3	-7	0	+	0	0	.
chr17	15439288	15439289	chr17:15439289:G:A	rs2906987	G	A	G	SOX2_HMG_3	-12	0	+	0	0	.
chr17	15439335	15439336	chr17:15439336:C:T	rs2954761	C	T	C	SOX2_HMG_3	35	0	+	0	0	.
chr17	15448436	15448437	chr17:15448437:G:A	rs78109166	G	A	G	SOX2_HMG_3	-19	0	-	0	0	.
chr17	15451900	15451901	chr17:15451901:A:G	rs2954777	A	G	G	SOX2_HMG_3	27	0	-	0	0	.
chr17	15747916	15747917	chr17:15747917:G:A	rs11652541	G	A	g	SOX2_HMG_3	26	0	+	0	0	.
chr17	15914936	15914937	chr17:15914937:C:T	rs113466152	C	T	C	SOX2_HMG_3	33	0	-	0	0	.
chr17	15914976	15914977	chr17:15914977:T:C	rs859255	T	C	C	SOX2_HMG_3	-7	0	-	0	0	.
chr17	15963950	15963951	chr17:15963951:C:G	rs146686306	C	G	c	SOX2_HMG_3	-15	0	-	0	0	.
chr17	16052825	16052826	chr17:16052826:G:T	rs11657912	G	T	G	SOX2_HMG_3	16	1	+	1.787928724726914	0.9848582829507242	GGCCAATATCCTTGATG
chr17	16052986	16052987	chr17:16052987:T:G	rs77583787	T	G	T	SOX2_HMG_3	4	1	-	5.378466950171035	-1.5302878291441884	ACTGAATTTTATTGAAA
chr17	16107605	16107606	chr17:16107606:A:G	rs4566208	A	G	G	SOX2_HMG_3	33	0	-	0	0	.
chr17	16398446	16398447	chr17:16398447:A:C	rs6502503	A	C	N	SOX2_HMG_3	36	0	-	0	0	.
chr17	16445785	16445786	chr17:16445786:A:G	rs35076500	A	G	A	SOX2_HMG_3	24	0	+	0	0	.
chr17	16453419	16453420	chr17:16453420:C:T	rs78351437	C	T	C	SOX2_HMG_3	-15	0	-	0	0	.
chr17	16584309	16584310	chr17:16584310:G:A	rs62072769	G	A	G	SOX2_HMG_3	-7	0	+	0	0	.
chr17	16653158	16653159	chr17:16653159:A:G	rs7221518	A	G	.	SOX2_HMG_3	14	1	-	2.7265055704238965	-1.3930192903285021	TGACAATGGTATTATTG
chr17	16869791	16869792	chr17:16869792:T:G	rs35829898	T	G	N	SOX2_HMG_3	-8	0	-	0	0	.
chr17	16889543	16889544	chr17:16889544:A:G	rs4280293	A	G	G	SOX2_HMG_3	4	1	+	6.561606472749845	-0.3471483065653749	AAGCAATGTTCTTGAAA
chr17	16978590	16978591	chr17:16978591:A:G	rs35898095	A	G	A	SOX2_HMG_3	11	1	-	5.067721788905232	-1.6249697093271145	AAGCAATATTATTCATA
chr17	16996807	16996808	chr17:16996808:C:T	rs11868128	C	T	T	SOX2_HMG_3	26	0	-	0	0	.
chr17	17005676	17005677	chr17:17005677:G:A	rs6502552	G	A	G	SOX2_HMG_3	-16	0	+	0	0	.
chr17	17150346	17150347	chr17:17150347:T:C	rs3744133	T	C	T	SOX2_HMG_3	31	0	-	0	0	.
chr17	17186470	17186471	chr17:17186471:A:C	rs59061797	A	C	A	SOX2_HMG_3	-10	0	-	0	0	.
chr17	17226609	17226610	chr17:17226610:C:T	rs1708620	C	T	C	SOX2_HMG_3	-10	0	+	0	0	.
chr17	17242757	17242758	chr17:17242758:G:A	rs544685892	G	A	G	SOX2_HMG_3	-4	0	-	0	0	.
chr17	17270591	17270592	chr17:17270592:C:T	rs76157921	C	T	C	SOX2_HMG_3	-19	0	+	0	0	.
chr17	17422636	17422637	chr17:17422637:T:G	rs16961675	T	G	T	SOX2_HMG_3	32	0	-	0	0	.
chr17	17497495	17497496	chr17:17497496:G:A	rs112156600	G	A	G	SOX2_HMG_3	-6	0	-	0	0	.
chr17	17750095	17750096	chr17:17750096:A:G	chr17:17750096:A:G	A	G	A	SOX2_HMG_3	15	1	-	5.023282889588083	2.180573733411225	TGTGAATGCAAGTGATA
chr17	17750096	17750097	chr17:17750097:T:C	rs12945601	T	C	T	SOX2_HMG_3	14	1	-	5.023282889588083	0.841405272286964	TGTGAATGCAAGTGATA
chr17	18313764	18313765	chr17:18313765:T:C	rs3794770	T	C	T	SOX2_HMG_3	25	0	-	0	0	.
chr17	18476820	18476821	chr17:18476821:C:G	rs4924879	C	G	G	SOX2_HMG_3	3	1	+	2.9012665294581184	-4.0074882498571025	TGTCAAAGGCAGTGGTG
chr17	18772732	18772733	chr17:18772733:C:T	rs75892641	C	T	c	SOX2_HMG_3	32	0	+	0	0	.
chr17	19063868	19063869	chr17:19063869:G:A	rs1476759554	G	A	.	SOX2_HMG_3	35	0	-	0	0	.
chr17	19063869	19063870	chr17:19063870:C:G	rs577577062	C	G	.	SOX2_HMG_3	34	0	-	0	0	.
chr17	19063895	19063896	chr17:19063896:T:C	rs200684642	T	C	.	SOX2_HMG_3	8	1	-	2.2963202187585243	3.1453641661221527	GCTCAATGACAGAGACT
chr17	19063902	19063903	chr17:19063903:G:A	rs367870364	G	A	.	SOX2_HMG_3	1	1	-	2.2963202187585243	2.2963202187585243	GCTCAATGACAGAGACT
chr17	19367133	19367134	chr17:19367134:G:A	rs3886478	G	A	G	SOX2_HMG_3	16	1	+	1.607528291261093	1.3338406748708218	CAGCATTGCCAGTGACG
chr17	19540055	19540056	chr17:19540056:G:A	rs117648865	G	A	G	SOX2_HMG_3	-2	0	+	0	0	.
chr17	19897235	19897236	chr17:19897236:T:C	rs9899357	T	C	T	SOX2_HMG_3	5	1	+	1.2943219882083437	1.2943219882083437	CATCATGGACAGTGATG
chr17	20053634	20053635	chr17:20053635:A:G	rs55853482	A	G	A	SOX2_HMG_3	10	1	+	4.732923915937053	-2.1758308633781684	CAGCAATGCTATAGAGA
chr17	20071290	20071291	chr17:20071291:A:G	rs17685923	A	G	G	SOX2_HMG_3	-14	0	+	0	0	.
chr17	20083547	20083548	chr17:20083548:T:A	rs4925079	T	A	T	SOX2_HMG_3	26	0	-	0	0	.
chr17	20203881	20203882	chr17:20203882:T:C	rs2703804	T	C	C	SOX2_HMG_3	0	1	+	11.504349717203608	11.641678695252274	TAACAATGCTATTGAGA
chr17	20218231	20218232	chr17:20218232:A:G	rs73981849	A	G	A	SOX2_HMG_3	-12	0	-	0	0	.
chr17	20268210	20268211	chr17:20268211:C:T	rs2158472	C	T	.	SOX2_HMG_3	19	0	-	0	0	.
chr17	20593409	20593410	chr17:20593410:T:C	rs9904149	T	C	.	SOX2_HMG_3	5	1	+	4.849402639149605	4.849402639149605	GGGCATTGTCATTGATT
chr17	20651041	20651042	chr17:20651042:T:C	rs643991	T	C	.	SOX2_HMG_3	36	0	-	0	0	.
chr17	20902183	20902184	chr17:20902184:T:G	rs16962515	T	G	.	SOX2_HMG_3	23	0	+	0	0	.
chr17	20977995	20977996	chr17:20977996:A:G	rs11654347	A	G	.	SOX2_HMG_3	6	1	-	3.633075313428975	-3.275679465886246	GCTCAATGTCATTATTC
chr17	21011321	21011322	chr17:21011322:G:A	rs2291035	G	A	G	SOX2_HMG_3	-3	0	+	0	0	.
chr17	21291272	21291273	chr17:21291273:G:C	rs199535233	G	C	C	SOX2_HMG_3	3	1	-	5.946518641637176	-0.9622361376780464	ATTCTATTGTATTGATT
chr17	21317190	21317191	chr17:21317191:A:G	rs141540832	A	G	a	SOX2_HMG_3	8	1	-	3.1847305494675444	2.3129941968316814	TGTAAATGTTAGTGACC
chr17	21980452	21980453	chr17:21980453:G:T	rs1281953092	G	T	.	SOX2_HMG_3	8	1	-	3.9773477721492534	3.8625722575568253	ATTCCATTCTATTGAAT
chr17	21980712	21980713	chr17:21980713:A:G	rs1473971608	A	G	.	SOX2_HMG_3	29	0	+	0	0	.
chr17	21982257	21982258	chr17:21982258:C:G	rs1370414508	C	G	.	SOX2_HMG_3	3	1	+	2.467949568364088	-4.440805210951132	AACCAATGGAATGGAGT
chr17	22524095	22524096	chr17:22524096:C:T	rs76639367	C	T	.	SOX2_HMG_3	17	0	-	0	0	.
chr17	22714580	22714581	chr17:22714581:C:T	rs12325748	C	T	t	SOX2_HMG_3	-14	0	+	0	0	.
chr17	22716750	22716751	chr17:22716751:T:G	rs113817313	T	G	.	SOX2_HMG_3	36	0	+	0	0	.
chr17	26800067	26800068	chr17:26800068:G:T	chr17:26800068:G:T	G	T	N	SOX2_HMG_3	11	1	+	13.395470030325846	14.812549999545796	AATCAATGGAAGTGAAT
chr17	26861440	26861441	chr17:26861441:T:G	rs1377947766	T	G	N	SOX2_HMG_3	2	1	+	5.427134193093179	1.559519358415138	ATTGAATGGAATTGAAA
chr17	27239602	27239603	chr17:27239603:T:G	rs62057211	T	G	T	SOX2_HMG_3	32	0	-	0	0	.
chr17	27244372	27244373	chr17:27244373:C:T	rs56295812	C	T	C	SOX2_HMG_3	-8	0	-	0	0	.
chr17	27354766	27354767	chr17:27354767:T:C	rs62058596	T	C	T	SOX2_HMG_3	33	0	+	0	0	.
chr17	27376777	27376778	chr17:27376778:T:A	rs322195	T	A	A	SOX2_HMG_3	12	1	+	2.6871469220588695	-4.221607857256351	GATCAGTGCTTGTGATA
chr17	27669185	27669186	chr17:27669186:T:C	rs116123712	T	C	T	SOX2_HMG_3	5	1	-	3.9215735936522007	-2.9871811856630197	GTTCAATGGACTTGAAC
chr17	27754134	27754135	chr17:27754135:A:G	rs11658423	A	G	G	SOX2_HMG_3	14	1	+	2.331240914650395	-1.8506367026507242	CACCTATGTAAGTGATT
chr17	27771754	27771755	chr17:27771755:G:A	rs7217335	G	A	G	SOX2_HMG_3	-13	0	-	0	0	.
chr17	27845349	27845350	chr17:27845350:G:A	rs72841278	G	A	G	SOX2_HMG_3	-19	0	-	0	0	.
chr17	27993269	27993270	chr17:27993270:T:C	rs59828704	T	C	T	SOX2_HMG_3	11	1	+	4.678473139975646	-2.0142183582567017	GTTCAAGGTCATTGAGC
chr17	28968371	28968372	chr17:28968372:C:T	rs868572508	C	T	C	SOX2_HMG_3	31	0	-	0	0	.
chr17	28968410	28968411	chr17:28968411:G:A	rs773848903	G	A	G	SOX2_HMG_3	-8	0	-	0	0	.
chr17	28968412	28968413	chr17:28968413:C:T	rs116294447	C	T	C	SOX2_HMG_3	-10	0	-	0	0	.
chr17	28971690	28971691	chr17:28971691:A:G	rs12453166	A	G	A	SOX2_HMG_3	-4	0	-	0	0	.
chr17	29079047	29079048	chr17:29079048:G:A	rs1873476	G	A	G	SOX2_HMG_3	19	0	+	0	0	.
chr17	29216328	29216329	chr17:29216329:C:G	rs72819418	C	G	C	SOX2_HMG_3	0	1	-	2.537013183823876	1.7919462821125538	GTGCACTGTCATTGAGA
chr17	29518613	29518614	chr17:29518614:A:G	rs12936194	A	G	A	SOX2_HMG_3	6	1	-	3.1406604732997643	-3.7680943060154566	CTTCCATTGTAGTGAGG
chr17	29710732	29710733	chr17:29710733:A:G	rs141436208	A	G	A	SOX2_HMG_3	-1	0	-	0	0	.
chr17	29854519	29854520	chr17:29854520:T:C	rs75486571	T	C	T	SOX2_HMG_3	9	1	+	3.5688008473700847	2.762130713433039	GAACAATTATAGTAATA
chr17	30322998	30322999	chr17:30322999:C:A	rs3110453	C	A	A	SOX2_HMG_3	-10	0	+	0	0	.
chr17	30341841	30341842	chr17:30341842:C:T	rs6505179	C	T	T	SOX2_HMG_3	11	1	-	2.8994066535888776	-2.376204875423521	TGCCAATTTCAGTGGTG
chr17	30530775	30530776	chr17:30530776:C:T	rs114112507	C	T	C	SOX2_HMG_3	-2	0	-	0	0	.
chr17	30831428	30831429	chr17:30831429:A:G	chr17:30831429:A:G	A	G	.	SOX2_HMG_3	21	0	+	0	0	.
chr17	31071350	31071351	chr17:31071351:G:A	rs4795571	G	A	G	SOX2_HMG_3	23	0	+	0	0	.
chr17	31089480	31089481	chr17:31089481:T:C	rs2940183	T	C	C	SOX2_HMG_3	32	0	-	0	0	.
chr17	31274398	31274399	chr17:31274399:A:C	rs113359320	A	C	A	SOX2_HMG_3	18	0	+	0	0	.
chr17	31322998	31322999	chr17:31322999:C:A	rs764766236	C	A	C	SOX2_HMG_3	-7	0	-	0	0	.
chr17	31406253	31406254	chr17:31406254:G:A	rs146750455	G	A	G	SOX2_HMG_3	-1	0	-	0	0	.
chr17	31630143	31630144	chr17:31630144:T:C	rs62062193	T	C	t	SOX2_HMG_3	6	1	+	9.677712896619248	2.768958117304029	CTTCAATGATAGTGAAC
chr17	31646493	31646494	chr17:31646494:A:G	rs770498	A	G	G	SOX2_HMG_3	12	1	-	1.7323493411330364	-5.176405438182184	TATCTTTGGCAGTGATA
chr17	32280403	32280404	chr17:32280404:T:C	rs9908969	T	C	T	SOX2_HMG_3	11	1	+	3.2497003772423034	-3.4429911209900426	AGGAAATTGCATTGATG
chr17	32357904	32357905	chr17:32357905:C:G	rs9914513	C	G	G	SOX2_HMG_3	-19	0	-	0	0	.
chr17	32504672	32504673	chr17:32504673:G:A	rs117164166	G	A	g	SOX2_HMG_3	24	0	-	0	0	.
chr17	32519833	32519834	chr17:32519834:A:T	rs73981821	A	T	A	SOX2_HMG_3	30	0	-	0	0	.
chr17	32534846	32534847	chr17:32534847:G:A	rs1034593	G	A	A	SOX2_HMG_3	21	0	+	0	0	.
chr17	32943700	32943701	chr17:32943701:G:A	rs9896361	G	A	A	SOX2_HMG_3	1	1	+	3.6258510795235956	5.457498669602886	GGTCAAGGCTATTGTCA
chr17	32992745	32992746	chr17:32992746:A:G	rs28906	A	G	g	SOX2_HMG_3	0	1	+	2.609688912447604	2.8302831915328976	AAGCAAGGTCATTGTGA
chr17	33073596	33073597	chr17:33073597:G:C	rs9893346	G	C	G	SOX2_HMG_3	-17	0	+	0	0	.
chr17	33162731	33162732	chr17:33162732:C:G	rs9303661	C	G	C	SOX2_HMG_3	31	0	+	0	0	.
chr17	33272628	33272629	chr17:33272629:G:C	rs12601597	G	C	C	SOX2_HMG_3	28	0	-	0	0	.
chr17	33279549	33279550	chr17:33279550:C:T	rs7211739	C	T	C	SOX2_HMG_3	-8	0	+	0	0	.
chr17	33299283	33299284	chr17:33299284:G:A	rs16968234	G	A	G	SOX2_HMG_3	1	1	+	5.26861308160148	7.100260671680772	AGTCAATGCTACTGGTG
chr17	33455010	33455011	chr17:33455011:A:G	rs9303663	A	G	A	SOX2_HMG_3	5	1	+	2.706503765883575	-4.202251013431645	AAACAATAGCAGCGATA
chr17	33460949	33460950	chr17:33460950:C:T	rs7221002	C	T	C	SOX2_HMG_3	17	0	-	0	0	.
chr17	33501966	33501967	chr17:33501967:T:C	rs529302835	T	C	T	SOX2_HMG_3	35	0	-	0	0	.
chr17	33657482	33657483	chr17:33657483:T:C	rs280051	T	C	C	SOX2_HMG_3	25	0	+	0	0	.
chr17	33781401	33781402	chr17:33781402:A:G	rs16968891	A	G	A	SOX2_HMG_3	6	1	-	2.621556827517508	-4.287197951797713	GACCAATGTTAGAGACA
chr17	33921949	33921950	chr17:33921950:T:A	rs17783755	T	A	A	SOX2_HMG_3	0	1	+	8.139228825384855	8.80103042605955	TAACAATGGAATTGGTG
chr17	33973555	33973556	chr17:33973556:C:T	rs902559	C	T	T	SOX2_HMG_3	-1	0	+	0	0	.
chr17	34160314	34160315	chr17:34160315:A:G	rs2097761	A	G	A	SOX2_HMG_3	11	1	-	0.8788908993221757	-5.81380059891017	GGTCTGTGCTATTGAGG
chr17	34169657	34169658	chr17:34169658:T:C	rs8069624	T	C	C	SOX2_HMG_3	12	1	+	3.1422701165035956	-3.766484662811625	TAGCAATTATGTTGAAG
chr17	34173333	34173334	chr17:34173334:C:T	rs4795883	C	T	T	SOX2_HMG_3	17	0	-	0	0	.
chr17	34361784	34361785	chr17:34361785:A:C	rs61758325	A	C	A	SOX2_HMG_3	6	1	-	3.8768639810136367	-3.0318907983015846	GCTTAATGTAAGTGATC
chr17	34375978	34375979	chr17:34375979:T:C	rs80018508	T	C	T	SOX2_HMG_3	8	1	-	2.705349542433513	3.5543934897971425	AATCAATGAGAGTGGCA
chr17	34378974	34378975	chr17:34378975:T:G	rs2157960	T	G	T	SOX2_HMG_3	35	0	-	0	0	.
chr17	34393262	34393263	chr17:34393263:C:A	rs159262	C	A	C	SOX2_HMG_3	-20	0	+	0	0	.
chr17	34486782	34486783	chr17:34486783:T:C	rs10853163	T	C	T	SOX2_HMG_3	19	0	-	0	0	.
chr17	34501284	34501285	chr17:34501285:G:A	rs1437214	G	A	G	SOX2_HMG_3	3	1	-	4.122535071066499	-2.78621970824872	TGTCAATTTCATTCAGT
chr17	34577566	34577567	chr17:34577567:C:T	rs887230	C	T	T	SOX2_HMG_3	-16	0	+	0	0	.
chr17	34688388	34688389	chr17:34688389:A:G	rs6505425	A	G	G	SOX2_HMG_3	15	1	+	3.692359928523341	3.25988634697244	GATCAAGAATATTGTAT
chr17	35079695	35079696	chr17:35079696:G:C	rs11870662	G	C	G	SOX2_HMG_3	0	1	+	6.8913845414495665	6.146317639738244	GATCAATGGGAGTGGTG
chr17	35080620	35080621	chr17:35080621:T:C	rs118074685	T	C	T	SOX2_HMG_3	11	1	+	5.932886111075632	-0.759805387156715	AAACAATGGTGTTGATC
chr17	35244289	35244290	chr17:35244290:G:T	rs57708672	G	T	G	SOX2_HMG_3	-20	0	-	0	0	.
chr17	35548668	35548669	chr17:35548669:T:A	rs78364481	T	A	T	SOX2_HMG_3	-14	0	+	0	0	.
chr17	35718200	35718201	chr17:35718201:G:A	rs59957772	G	A	G	SOX2_HMG_3	31	0	-	0	0	.
chr17	35832561	35832562	chr17:35832562:C:T	rs4796113	C	T	C	SOX2_HMG_3	-19	0	-	0	0	.
chr17	35895607	35895608	chr17:35895608:G:A	rs61590868	G	A	G	SOX2_HMG_3	13	1	+	7.457750487871394	0.5489957085561743	ACACAATTTTATTGAGT
chr17	36118985	36118986	chr17:36118986:G:T	rs13342558	G	T	G	SOX2_HMG_3	8	1	+	1.6568437297217307	1.7943116495863924	AATCAATGGTCTAGAAC
chr17	36972932	36972933	chr17:36972933:A:G	rs9330246	A	G	A	SOX2_HMG_3	-2	0	+	0	0	.
chr17	37109760	37109761	chr17:37109761:T:C	rs2053670	T	C	C	SOX2_HMG_3	-17	0	-	0	0	.
chr17	37251962	37251963	chr17:37251963:A:G	rs1519091	A	G	A	SOX2_HMG_3	9	1	-	2.6372054823940565	1.8305353484570115	AATCAATGGTCCTGAGT
chr17	37742137	37742138	chr17:37742138:C:T	rs140202989	C	T	C	SOX2_HMG_3	29	0	-	0	0	.
chr17	38524805	38524806	chr17:38524806:T:C	rs4795288	T	C	T	SOX2_HMG_3	27	0	-	0	0	.
chr17	38606212	38606213	chr17:38606213:T:C	rs558439231	T	C	T	SOX2_HMG_3	19	0	-	0	0	.
chr17	38609604	38609605	chr17:38609605:G:C	rs7214959	G	C	g	SOX2_HMG_3	-20	0	+	0	0	.
chr17	38609649	38609650	chr17:38609650:C:T	rs7210925	C	T	T	SOX2_HMG_3	25	0	+	0	0	.
chr17	38942752	38942753	chr17:38942753:T:C	rs199649284	T	C	T	SOX2_HMG_3	27	0	+	0	0	.
chr17	39154283	39154284	chr17:39154284:C:T	rs16517	C	T	C	SOX2_HMG_3	31	0	-	0	0	.
chr17	39154285	39154286	chr17:39154286:C:T	rs3025199	C	T	C	SOX2_HMG_3	29	0	-	0	0	.
chr17	39526403	39526404	chr17:39526404:A:G	rs4404103	A	G	A	SOX2_HMG_3	4	1	+	5.484252625029834	-1.4245021542853882	CATCAATGGCCTTGGTT
chr17	40168534	40168535	chr17:40168535:A:G	rs41275668	A	G	A	SOX2_HMG_3	-4	0	-	0	0	.
chr17	40220328	40220329	chr17:40220329:T:G	rs55835834	T	G	G	SOX2_HMG_3	35	0	-	0	0	.
chr17	40439600	40439601	chr17:40439601:C:T	rs1868758	C	T	C	SOX2_HMG_3	-8	0	-	0	0	.
chr17	40516141	40516142	chr17:40516142:T:C	rs532825451	T	C	T	SOX2_HMG_3	-18	0	-	0	0	.
chr17	40552331	40552332	chr17:40552332:G:A	rs533343604	G	A	G	SOX2_HMG_3	-9	0	-	0	0	.
chr17	40607613	40607614	chr17:40607614:T:A	rs803123	T	A	A	SOX2_HMG_3	33	0	+	0	0	.
chr17	40845057	40845058	chr17:40845058:T:C	rs17474883	T	C	T	SOX2_HMG_3	21	0	+	0	0	.
chr17	40883799	40883800	chr17:40883800:G:A	rs2524302	G	A	G	SOX2_HMG_3	23	0	+	0	0	.
chr17	40883853	40883854	chr17:40883854:C:T	rs2189387	C	T	C	SOX2_HMG_3	-9	0	-	0	0	.
chr17	40939035	40939036	chr17:40939036:A:G	rs7224867	A	G	G	SOX2_HMG_3	8	1	-	4.614281817707251	3.7425454650713887	CATTAATTTCATTGTAG
chr17	40987545	40987546	chr17:40987546:A:G	rs2872966	A	G	A	SOX2_HMG_3	18	0	+	0	0	.
chr17	41381931	41381932	chr17:41381932:G:C	rs3744390	G	C	G	SOX2_HMG_3	19	0	+	0	0	.
chr17	41392909	41392910	chr17:41392910:A:G	rs9907506	A	G	G	SOX2_HMG_3	12	1	-	5.71113454590837	-1.1976202334068506	ACCCAATGGCATTGGTG
chr17	41444117	41444118	chr17:41444118:C:T	rs4796639	C	T	C	SOX2_HMG_3	4	1	-	4.6859270850689665	11.594681864384187	GGTCGATTGCAGTGAAG
chr17	41483988	41483989	chr17:41483989:T:C	rs4796730	T	C	T	SOX2_HMG_3	6	1	+	3.676103434658607	-3.2326513446566145	CGGAAATGTTATTGAAT
chr17	41506882	41506883	chr17:41506883:G:A	rs8079823	G	A	G	SOX2_HMG_3	21	0	+	0	0	.
chr17	41506883	41506884	chr17:41506884:A:T	rs8081495	A	T	A	SOX2_HMG_3	22	0	+	0	0	.
chr17	41591787	41591788	chr17:41591788:A:G	rs7208807	A	G	A	SOX2_HMG_3	12	1	-	3.3638633926247454	-3.544891386690475	CATTAATAGTATTGTGT
chr17	41630162	41630163	chr17:41630163:C:T	rs12937570	C	T	T	SOX2_HMG_3	11	1	-	2.50164873508744	-2.773962793924958	ACACAATGCTAGTTATA
chr17	41693831	41693832	chr17:41693832:A:G	rs77748677	A	G	A	SOX2_HMG_3	17	0	-	0	0	.
chr17	42003448	42003449	chr17:42003449:G:A	rs8079958	G	A	G	SOX2_HMG_3	11	1	+	4.230178006349535	-1.0454335226628642	GAACAATTCCAGTGTCA
chr17	42171537	42171538	chr17:42171538:C:T	chr17:42171538:C:T	C	T	C	SOX2_HMG_3	27	0	-	0	0	.
chr17	42215971	42215972	chr17:42215972:G:A	rs16967580	G	A	G	SOX2_HMG_3	9	1	-	3.0131542873605994	3.8198244212976444	AATCAATGCCGGTGTCA
chr17	42248913	42248914	chr17:42248914:T:C	rs114408613	T	C	T	SOX2_HMG_3	-17	0	+	0	0	.
chr17	42248960	42248961	chr17:42248961:G:A	rs763777481	G	A	G	SOX2_HMG_3	30	0	+	0	0	.
chr17	42269060	42269061	chr17:42269061:C:A	rs77709024	C	A	C	SOX2_HMG_3	-17	0	-	0	0	.
chr17	42428650	42428651	chr17:42428651:T:A	rs35272895	T	A	T	SOX2_HMG_3	-18	0	+	0	0	.
chr17	42517632	42517633	chr17:42517633:G:A	rs573572270	G	A	G	SOX2_HMG_3	24	0	+	0	0	.
chr17	42560398	42560399	chr17:42560399:G:C	rs621141	G	C	C	SOX2_HMG_3	31	0	-	0	0	.
chr17	42585098	42585099	chr17:42585099:G:A	rs4792992	G	A	G	SOX2_HMG_3	32	0	-	0	0	.
chr17	42982316	42982317	chr17:42982317:A:G	rs7207335	A	G	A	SOX2_HMG_3	34	0	-	0	0	.
chr17	43125663	43125664	chr17:43125664:A:G	rs1201118203	A	G	A	SOX2_HMG_3	10	1	-	2.290751428111987	2.290751428111987	CAGCAATTACTGTGATG
chr17	43352153	43352154	chr17:43352154:G:A	rs144953214	G	A	G	SOX2_HMG_3	2	1	+	2.036068235451464	2.036068235451464	ACGCCATGACATTGAAG
chr17	43516799	43516800	chr17:43516800:G:A	rs9895324	G	A	A	SOX2_HMG_3	28	0	-	0	0	.
chr17	43578669	43578670	chr17:43578670:T:C	rs1316957	T	C	T	SOX2_HMG_3	-16	0	-	0	0	.
chr17	43732478	43732479	chr17:43732479:C:T	rs1534402	C	T	T	SOX2_HMG_3	25	0	+	0	0	.
chr17	43815752	43815753	chr17:43815753:T:C	rs1368424620	T	C	T	SOX2_HMG_3	9	1	-	3.2662469893084167	-1.3145280398449528	CATCATTGCAATTGGAG
chr17	44620115	44620116	chr17:44620116:G:A	rs11655754	G	A	g	SOX2_HMG_3	22	0	+	0	0	.
chr17	44848667	44848668	chr17:44848668:C:A	rs7225919	C	A	C	SOX2_HMG_3	-12	0	+	0	0	.
chr17	44872073	44872074	chr17:44872074:C:T	rs71373521	C	T	C	SOX2_HMG_3	21	0	+	0	0	.
chr17	44872082	44872083	chr17:44872083:G:A	rs17628255	G	A	G	SOX2_HMG_3	30	0	+	0	0	.
chr17	44876040	44876041	chr17:44876041:A:G	rs2289674	A	G	A	SOX2_HMG_3	22	0	+	0	0	.
chr17	44955188	44955189	chr17:44955189:C:T	rs75498163	C	T	T	SOX2_HMG_3	27	0	-	0	0	.
chr17	45261684	45261685	chr17:45261685:A:G	rs527657003	A	G	A	SOX2_HMG_3	14	1	-	0.9666603931419628	-3.152864467610436	GAGCAATGGCCTTGTGC
chr17	45287963	45287964	chr17:45287964:C:T	rs11574816	C	T	C	SOX2_HMG_3	23	0	-	0	0	.
chr17	45576741	45576742	chr17:45576742:T:C	rs2693366	T	C	.	SOX2_HMG_3	-18	0	+	0	0	.
chr17	45580254	45580255	chr17:45580255:G:T	rs55887853	G	T	.	SOX2_HMG_3	17	0	-	0	0	.
chr17	45745959	45745960	chr17:45745960:A:G	rs75643244	A	G	G	SOX2_HMG_3	-8	0	-	0	0	.
chr17	45773278	45773279	chr17:45773279:C:T	rs60814418	C	T	T	SOX2_HMG_3	3	1	+	4.174445771479533	-2.7343090078356855	TCCCAATTCTAGTGAGG
chr17	45837361	45837362	chr17:45837362:G:T	rs62054803	G	T	G	SOX2_HMG_3	7	1	+	4.2025636237311685	2.157853118997632	AGACAATGCCAGTGGGG
chr17	45973483	45973484	chr17:45973484:A:G	rs62063776	A	G	G	SOX2_HMG_3	21	0	-	0	0	.
chr17	46171447	46171448	chr17:46171448:G:A	rs1881194	G	A	A	SOX2_HMG_3	19	0	+	0	0	.
chr17	46274764	46274765	chr17:46274765:G:T	rs2668622	G	T	.	SOX2_HMG_3	3	1	-	2.9195980766295038	-3.9891567026857158	AAACAATGATACTGTGG
chr17	46277613	46277614	chr17:46277614:C:A	rs2942178	C	A	.	SOX2_HMG_3	-11	0	-	0	0	.
chr17	46280150	46280151	chr17:46280151:T:C	rs78485162	T	C	.	SOX2_HMG_3	14	1	-	2.1227317486177864	-2.059145868683333	TCTCAAGGCAAGTGATC
chr17	46286968	46286969	chr17:46286969:G:A	rs578102530	G	A	.	SOX2_HMG_3	-19	0	+	0	0	.
chr17	46894285	46894286	chr17:46894286:C:A	rs16941192	C	A	C	SOX2_HMG_3	-1	0	+	0	0	.
chr17	46910366	46910367	chr17:46910367:A:C	rs197910	A	C	C	SOX2_HMG_3	31	0	-	0	0	.
chr17	46998816	46998817	chr17:46998817:C:G	rs77212031	C	G	.	SOX2_HMG_3	-15	0	+	0	0	.
chr17	47276602	47276603	chr17:47276603:C:T	rs115492947	C	T	C	SOX2_HMG_3	-3	0	+	0	0	.
chr17	47935135	47935136	chr17:47935136:A:G	rs80347400	A	G	A	SOX2_HMG_3	-10	0	+	0	0	.
chr17	47935138	47935139	chr17:47935139:C:T	rs11652827	C	T	C	SOX2_HMG_3	-7	0	+	0	0	.
chr17	48128652	48128653	chr17:48128653:C:T	rs758999	C	T	T	SOX2_HMG_3	-20	0	+	0	0	.
chr17	48173887	48173888	chr17:48173888:C:T	rs17681361	C	T	C	SOX2_HMG_3	26	0	-	0	0	.
chr17	48207164	48207165	chr17:48207165:G:T	rs190591861	G	T	G	SOX2_HMG_3	-10	0	+	0	0	.
chr17	48260562	48260563	chr17:48260563:T:C	rs8073979	T	C	T	SOX2_HMG_3	6	1	+	11.354760277955624	4.446005498640403	GTTCAATTTAATTGATT
chr17	48333439	48333440	chr17:48333440:C:T	rs183071364	C	T	C	SOX2_HMG_3	29	0	-	0	0	.
chr17	48601451	48601452	chr17:48601452:T:C	rs4793951	T	C	T	SOX2_HMG_3	23	0	-	0	0	.
chr17	48638117	48638118	chr17:48638118:T:C	rs138900350	T	C	T	SOX2_HMG_3	8	1	-	1.483730177698907	2.332774125062536	GGGCAATCACAGTGAGA
chr17	48763418	48763419	chr17:48763419:T:C	rs17707058	T	C	C	SOX2_HMG_3	19	0	-	0	0	.
chr17	48994120	48994121	chr17:48994121:A:G	rs1390154	A	G	G	SOX2_HMG_3	-20	0	+	0	0	.
chr17	49105487	49105488	chr17:49105488:A:G	rs7211751	A	G	-	SOX2_HMG_3	24	0	+	0	0	.
chr17	49112452	49112453	chr17:49112453:G:A	rs1004274	G	A	-	SOX2_HMG_3	-10	0	-	0	0	.
chr17	49145919	49145920	chr17:49145920:T:C	rs4794023	T	C	C	SOX2_HMG_3	12	1	+	3.6984777787598495	-3.210277000555369	CTTTAATGGAATTGTTG
chr17	49184292	49184293	chr17:49184293:G:C	rs2898833	G	C	G	SOX2_HMG_3	-8	0	+	0	0	.
chr17	49602992	49602993	chr17:49602993:C:A	rs74749701	C	A	C	SOX2_HMG_3	-5	0	-	0	0	.
chr17	49991355	49991356	chr17:49991356:T:A	rs8081044	T	A	A	SOX2_HMG_3	11	1	+	1.7672757375768673	-4.92541576065548	GGTCCATGCAATTGTCA
chr17	50045884	50045885	chr17:50045885:C:T	rs9895356	C	T	T	SOX2_HMG_3	27	0	+	0	0	.
chr17	50256357	50256358	chr17:50256358:C:A	rs8073321	C	A	A	SOX2_HMG_3	25	0	-	0	0	.
chr17	50421711	50421712	chr17:50421712:A:C	rs77582421	A	C	A	SOX2_HMG_3	21	0	-	0	0	.
chr17	50426842	50426843	chr17:50426843:C:T	rs111766565	C	T	C	SOX2_HMG_3	15	1	-	2.985898043452724	3.4183716250036245	AAGCCATGTTAGTGAGC
chr17	50517618	50517619	chr17:50517619:G:A	rs113141749	G	A	G	SOX2_HMG_3	11	1	+	1.203525211270476	-4.072086317741922	CTTCGATGGCAGTGACC
chr17	50640893	50640894	chr17:50640894:C:A	chr17:50640894:C:A	C	A	C	SOX2_HMG_3	-11	0	+	0	0	.
chr17	50640901	50640902	chr17:50640902:C:T	rs183904195	C	T	C	SOX2_HMG_3	-3	0	+	0	0	.
chr17	50862165	50862166	chr17:50862166:C:T	rs9303568	C	T	C	SOX2_HMG_3	-2	0	-	0	0	.
chr17	50885558	50885559	chr17:50885559:T:C	rs12150160	T	C	T	SOX2_HMG_3	26	0	-	0	0	.
chr17	50893876	50893877	chr17:50893877:C:T	rs180803222	C	T	C	SOX2_HMG_3	-20	0	-	0	0	.
chr17	50940779	50940780	chr17:50940780:T:C	rs9893647	T	C	C	SOX2_HMG_3	22	0	-	0	0	.
chr17	51167675	51167676	chr17:51167676:T:G	rs73351708	T	G	T	SOX2_HMG_3	-4	0	-	0	0	.
chr17	51440788	51440789	chr17:51440789:C:A	rs2318981	C	A	A	SOX2_HMG_3	24	0	+	0	0	.
chr17	51805599	51805600	chr17:51805600:A:G	rs73336608	A	G	a	SOX2_HMG_3	-2	0	+	0	0	.
chr17	51861033	51861034	chr17:51861034:C:T	rs9908914	C	T	C	SOX2_HMG_3	-13	0	-	0	0	.
chr17	52383709	52383710	chr17:52383710:C:G	rs147543943	C	G	C	SOX2_HMG_3	16	1	-	1.346734600444823	-0.6531078944717206	AGGCAATGGCATAGTAG
chr17	52383728	52383729	chr17:52383729:G:A	chr17:52383729:G:A	G	A	G	SOX2_HMG_3	-3	0	-	0	0	.
chr17	53236992	53236993	chr17:53236993:C:T	rs2222372	C	T	C	SOX2_HMG_3	8	1	+	3.3542497868076064	4.225986139443469	AATGAATGCTATTTATT
chr17	53336372	53336373	chr17:53336373:G:C	rs806888	G	C	c	SOX2_HMG_3	26	0	-	0	0	.
chr17	53456216	53456217	chr17:53456217:G:C	rs550933477	G	C	G	SOX2_HMG_3	-1	0	-	0	0	.
chr17	53825805	53825806	chr17:53825806:A:G	rs9900857	A	G	A	SOX2_HMG_3	36	0	+	0	0	.
chr17	54218039	54218040	chr17:54218040:G:A	rs117822504	G	A	G	SOX2_HMG_3	36	0	+	0	0	.
chr17	54352474	54352475	chr17:54352475:T:A	rs8079552	T	A	T	SOX2_HMG_3	-20	0	-	0	0	.
chr17	55133815	55133816	chr17:55133816:C:T	rs2529506	C	T	T	SOX2_HMG_3	36	0	-	0	0	.
chr17	55286664	55286665	chr17:55286665:T:C	rs16955840	T	C	T	SOX2_HMG_3	-18	0	-	0	0	.
chr17	55654217	55654218	chr17:55654218:G:A	rs8074638	G	A	G	SOX2_HMG_3	15	1	-	4.005097060775029	6.847806216951888	AATCAACAGCAGTGACG
chr17	55684680	55684681	chr17:55684681:C:T	rs12951953	C	T	C	SOX2_HMG_3	-19	0	-	0	0	.
chr17	55921410	55921411	chr17:55921411:T:G	rs73320219	T	G	T	SOX2_HMG_3	9	1	+	5.084128526717702	-1.3552218443823951	GAACAAGGATAGTGATT
chr17	56075312	56075313	chr17:56075313:T:G	rs9899803	T	G	T	SOX2_HMG_3	-13	0	+	0	0	.
chr17	56075342	56075343	chr17:56075343:T:C	rs78564882	T	C	T	SOX2_HMG_3	17	0	+	0	0	.
chr17	56075355	56075356	chr17:56075356:A:G	rs9898039	A	G	A	SOX2_HMG_3	30	0	+	0	0	.
chr17	56257954	56257955	chr17:56257955:A:T	rs56138213	A	T	A	SOX2_HMG_3	12	1	-	3.4131528162892235	-3.495601963025996	GAGTAATGACAGTGAGG
chr17	56322299	56322300	chr17:56322300:A:G	rs17213137	A	G	A	SOX2_HMG_3	2	1	-	2.396229512053779	-2.6071425582618093	TGTCAATAGTATAGGTG
chr17	56595488	56595489	chr17:56595489:G:C	rs116716909	G	C	G	SOX2_HMG_3	33	0	+	0	0	.
chr17	56599889	56599890	chr17:56599890:A:G	rs7213501	A	G	A	SOX2_HMG_3	19	0	+	0	0	.
chr17	57104955	57104956	chr17:57104956:C:T	rs3785484	C	T	C	SOX2_HMG_3	20	0	-	0	0	.
chr17	57214753	57214754	chr17:57214754:T:G	rs12709393	T	G	G	SOX2_HMG_3	-6	0	+	0	0	.
chr17	57380188	57380189	chr17:57380189:T:C	rs2695349	T	C	C	SOX2_HMG_3	33	0	-	0	0	.
chr17	57417383	57417384	chr17:57417384:C:A	rs9892052	C	A	A	SOX2_HMG_3	-7	0	-	0	0	.
chr17	57485954	57485955	chr17:57485955:C:T	rs277063	C	T	C	SOX2_HMG_3	8	1	-	3.1560318737045185	2.3069879263408897	GGTCTATTGCATTGGTG
chr17	57570727	57570728	chr17:57570728:G:A	rs72833094	G	A	G	SOX2_HMG_3	19	0	-	0	0	.
chr17	57575377	57575378	chr17:57575378:C:T	rs1362506	C	T	T	SOX2_HMG_3	1	1	+	2.650438252209527	2.650438252209527	GCTCAATGGGAGTGGAG
chr17	57640383	57640384	chr17:57640384:T:C	rs6503825	T	C	C	SOX2_HMG_3	32	0	+	0	0	.
chr17	57658593	57658594	chr17:57658594:T:A	rs76637018	T	A	T	SOX2_HMG_3	12	1	+	4.001148474823966	-2.907606304491255	AATCAATAATTTTGTAA
chr17	57838578	57838579	chr17:57838579:C:T	rs9908668	C	T	T	SOX2_HMG_3	22	0	+	0	0	.
chr17	57839209	57839210	chr17:57839210:C:G	rs3785489	C	G	C	SOX2_HMG_3	4	1	+	2.0009721433375995	2.0009721433375995	AATCCATGACATTAAAG
chr17	58370590	58370591	chr17:58370591:G:C	rs62082093	G	C	G	SOX2_HMG_3	22	0	-	0	0	.
chr17	58615770	58615771	chr17:58615771:C:T	rs302859	C	T	T	SOX2_HMG_3	-17	0	-	0	0	.
chr17	58667025	58667026	chr17:58667026:C:T	rs113473833	C	T	c	SOX2_HMG_3	18	0	+	0	0	.
chr17	58786769	58786770	chr17:58786770:T:C	rs144173593	T	C	T	SOX2_HMG_3	0	1	-	3.1199951013504905	3.3405893804357842	AAACAATAATATGGAAG
chr17	59336685	59336686	chr17:59336686:C:T	rs8065479	C	T	T	SOX2_HMG_3	7	1	-	3.0266310850735443	0.2978439645122093	TATTAATGTTAGTGCTG
chr17	59441433	59441434	chr17:59441434:G:A	rs116933436	G	A	G	SOX2_HMG_3	8	1	-	2.763947347809097	3.63568370044496	TGACAATGCTATTAAGA
chr17	59547761	59547762	chr17:59547762:G:A	rs7217180	G	A	A	SOX2_HMG_3	7	1	+	1.473505102999278	-1.2552820175620576	GGTCAATGCAATGGGGA
chr17	59572816	59572817	chr17:59572817:A:G	rs143388809	A	G	a	SOX2_HMG_3	24	0	-	0	0	.
chr17	59618630	59618631	chr17:59618631:A:G	rs12944716	A	G	G	SOX2_HMG_3	-20	0	+	0	0	.
chr17	59777058	59777059	chr17:59777059:G:A	rs6503941	G	A	A	SOX2_HMG_3	21	0	-	0	0	.
chr17	59913235	59913236	chr17:59913236:A:T	rs1292033	A	T	A	SOX2_HMG_3	33	0	+	0	0	.
chr17	60127471	60127472	chr17:60127472:A:G	rs11657467	A	G	-	SOX2_HMG_3	23	0	+	0	0	.
chr17	60249686	60249687	chr17:60249687:A:G	rs78812326	A	G	A	SOX2_HMG_3	-6	0	-	0	0	.
chr17	60393041	60393042	chr17:60393042:T:G	rs112135325	T	G	T	SOX2_HMG_3	17	0	+	0	0	.
chr17	60393051	60393052	chr17:60393052:G:A	rs192678203	G	A	G	SOX2_HMG_3	27	0	+	0	0	.
chr17	60502310	60502311	chr17:60502311:C:G	rs8081970	C	G	C	SOX2_HMG_3	8	1	-	3.7848558823167306	3.0505874495455294	AGTTAATAGTAGTGAAT
chr17	60598613	60598614	chr17:60598614:T:C	chr17:60598614:T:C	T	C	T	SOX2_HMG_3	12	1	+	1.9355788025562075	-4.973175976759013	AATCAGAGTAATTGAAG
chr17	61002667	61002668	chr17:61002668:G:A	rs78039895	G	A	G	SOX2_HMG_3	25	0	-	0	0	.
chr17	61134950	61134951	chr17:61134951:C:T	rs16944865	C	T	C	SOX2_HMG_3	27	0	+	0	0	.
chr17	61159651	61159652	chr17:61159652:A:C	rs1476098	A	C	A	SOX2_HMG_3	31	0	+	0	0	.
chr17	61313112	61313113	chr17:61313113:C:T	rs7221895	C	T	C	SOX2_HMG_3	-14	0	-	0	0	.
chr17	61962633	61962634	chr17:61962634:A:G	rs2278813	A	G	A	SOX2_HMG_3	11	1	-	5.318068973358841	-1.3746225248735058	GTTCTATTATATTGATT
chr17	62058806	62058807	chr17:62058807:G:A	rs4422036	G	A	G	SOX2_HMG_3	7	1	+	5.369114269279148	2.640327148717813	GCTCAACGGTATTGACT
chr17	62193477	62193478	chr17:62193478:G:C	rs73327612	G	C	G	SOX2_HMG_3	35	0	+	0	0	.
chr17	62787400	62787401	chr17:62787401:T:C	rs143504792	T	C	T	SOX2_HMG_3	11	1	+	10.206311536656994	3.513620038424645	GATCCATGCCATTGATA
chr17	62792248	62792249	chr17:62792249:G:T	rs145907152	G	T	G	SOX2_HMG_3	26	0	+	0	0	.
chr17	63474188	63474189	chr17:63474189:G:A	rs7213516	G	A	G	SOX2_HMG_3	35	0	-	0	0	.
chr17	63474243	63474244	chr17:63474244:T:G	rs7214530	T	G	T	SOX2_HMG_3	-20	0	-	0	0	.
chr17	63498881	63498882	chr17:63498882:G:A	rs56060049	G	A	A	SOX2_HMG_3	33	0	+	0	0	.
chr17	63787426	63787427	chr17:63787427:T:C	rs9747164	T	C	T	SOX2_HMG_3	-17	0	-	0	0	.
chr17	64815245	64815246	chr17:64815246:A:C	rs2074181	A	C	C	SOX2_HMG_3	6	1	-	5.5570531207065805	-1.3517016586086423	CTTCTATGGTATTGTTG
chr17	64929768	64929769	chr17:64929769:A:G	rs62072098	A	G	.	SOX2_HMG_3	27	0	-	0	0	.
chr17	65023285	65023286	chr17:65023286:C:T	rs117394331	C	T	C	SOX2_HMG_3	-1	0	+	0	0	.
chr17	65023312	65023313	chr17:65023313:C:T	rs79770194	C	T	C	SOX2_HMG_3	26	0	+	0	0	.
chr17	65131046	65131047	chr17:65131047:T:C	rs2007835	T	C	c	SOX2_HMG_3	29	0	-	0	0	.
chr17	65250159	65250160	chr17:65250160:T:A	rs17763038	T	A	T	SOX2_HMG_3	4	1	-	2.988756037364364	-3.9199987419508577	AGTCAATGAGAGTGTGT
chr17	65347598	65347599	chr17:65347599:A:G	rs8067512	A	G	A	SOX2_HMG_3	-6	0	-	0	0	.
chr17	65465056	65465057	chr17:65465057:T:C	rs4563070	T	C	C	SOX2_HMG_3	17	0	+	0	0	.
chr17	65692132	65692133	chr17:65692133:C:T	rs232128	C	T	T	SOX2_HMG_3	-1	0	+	0	0	.
chr17	65775039	65775040	chr17:65775040:C:T	rs115123735	C	T	C	SOX2_HMG_3	-4	0	-	0	0	.
chr17	65821198	65821199	chr17:65821199:T:C	rs76997522	T	C	T	SOX2_HMG_3	21	0	-	0	0	.
chr17	65885446	65885447	chr17:65885447:T:C	rs191412599	T	C	T	SOX2_HMG_3	32	0	+	0	0	.
chr17	66021212	66021213	chr17:66021213:A:G	rs973861	A	G	a	SOX2_HMG_3	22	0	+	0	0	.
chr17	66076512	66076513	chr17:66076513:G:A	rs34163781	G	A	G	SOX2_HMG_3	-2	0	-	0	0	.
chr17	66431744	66431745	chr17:66431745:T:C	rs9913908	T	C	T	SOX2_HMG_3	23	0	+	0	0	.
chr17	66661722	66661723	chr17:66661723:G:T	rs149144268	G	T	G	SOX2_HMG_3	8	1	+	2.535468448649675	2.6729363685143377	CGTAAATGGTGTTGATG
chr17	66661744	66661745	chr17:66661745:G:C	rs181232072	G	C	G	SOX2_HMG_3	30	0	+	0	0	.
chr17	66791454	66791455	chr17:66791455:T:C	rs4791040	T	C	T	SOX2_HMG_3	18	0	+	0	0	.
chr17	66827243	66827244	chr17:66827244:A:G	rs78565422	A	G	a	SOX2_HMG_3	11	1	-	2.8111972309631996	-3.8814942672691473	AACAAATTGTATTGAGA
chr17	66938888	66938889	chr17:66938889:G:C	rs7211879	G	C	G	SOX2_HMG_3	-16	0	+	0	0	.
chr17	66938931	66938932	chr17:66938932:G:A	rs111363448	G	A	G	SOX2_HMG_3	27	0	+	0	0	.
chr17	67039098	67039099	chr17:67039099:T:C	rs4790993	T	C	T	SOX2_HMG_3	2	1	-	7.877799333397267	7.877799333397267	TAACAATGTGATTGATG
chr17	67039118	67039119	chr17:67039119:C:T	rs2885928	C	T	T	SOX2_HMG_3	-18	0	-	0	0	.
chr17	67485992	67485993	chr17:67485993:G:A	rs2916148	G	A	a	SOX2_HMG_3	8	1	+	3.6953514323238474	2.846307484960219	AAGCAATAGTATTAAAA
chr17	67533062	67533063	chr17:67533063:C:T	rs35966843	C	T	C	SOX2_HMG_3	33	0	-	0	0	.
chr17	67549929	67549930	chr17:67549930:C:T	rs35201675	C	T	C	SOX2_HMG_3	17	0	-	0	0	.
chr17	67549959	67549960	chr17:67549960:G:A	rs184503617	G	A	G	SOX2_HMG_3	-13	0	-	0	0	.
chr17	68130271	68130272	chr17:68130272:A:G	rs71382164	A	G	A	SOX2_HMG_3	5	1	+	4.549097071545107	-2.359657707770114	CCTCAATGCTATTTTTA
chr17	68168249	68168250	chr17:68168250:C:A	rs143798484	C	A	C	SOX2_HMG_3	-18	0	-	0	0	.
chr17	68183673	68183674	chr17:68183674:C:G	rs11077784	C	G	C	SOX2_HMG_3	24	0	+	0	0	.
chr17	68253353	68253354	chr17:68253354:C:T	rs61103052	C	T	C	SOX2_HMG_3	23	0	-	0	0	.
chr17	68396396	68396397	chr17:68396397:G:C	rs7208111	G	C	C	SOX2_HMG_3	-16	0	+	0	0	.
chr17	68450661	68450662	chr17:68450662:T:C	rs2302782	T	C	T	SOX2_HMG_3	-9	0	-	0	0	.
chr17	68456324	68456325	chr17:68456325:T:G	rs533050285	T	G	T	SOX2_HMG_3	-14	0	+	0	0	.
chr17	68621353	68621354	chr17:68621354:T:G	rs16973129	T	G	T	SOX2_HMG_3	23	0	+	0	0	.
chr17	68665227	68665228	chr17:68665228:T:G	rs11658862	T	G	T	SOX2_HMG_3	23	0	-	0	0	.
chr17	68665231	68665232	chr17:68665232:A:G	rs11657717	A	G	G	SOX2_HMG_3	19	0	-	0	0	.
chr17	68808463	68808464	chr17:68808464:C:G	rs73357092	C	G	C	SOX2_HMG_3	-5	0	+	0	0	.
chr17	68830697	68830698	chr17:68830698:G:C	rs7219718	G	C	G	SOX2_HMG_3	11	1	+	3.2706976170199975	-2.004913911992401	CCTCAAATCTAGTGATT
chr17	68830707	68830708	chr17:68830708:C:G	rs7215620	C	G	G	SOX2_HMG_3	21	0	+	0	0	.
chr17	68954607	68954608	chr17:68954608:T:C	rs7208717	T	C	t	SOX2_HMG_3	23	0	-	0	0	.
chr17	68961576	68961577	chr17:68961577:G:C	rs1408964818	G	C	g	SOX2_HMG_3	-7	0	+	0	0	.
chr17	68975737	68975738	chr17:68975738:T:C	rs11077859	T	C	c	SOX2_HMG_3	23	0	-	0	0	.
chr17	68975756	68975757	chr17:68975757:C:T	rs11077860	C	T	c	SOX2_HMG_3	4	1	-	2.3474228143529294	9.25617759366815	AGGCGATGTCAGTGAGG
chr17	68976108	68976109	chr17:68976109:A:T	rs2191212	A	T	a	SOX2_HMG_3	22	0	-	0	0	.
chr17	69762084	69762085	chr17:69762085:T:A	chr17:69762085:T:A	T	A	T	SOX2_HMG_3	-1	0	+	0	0	.
chr17	69877003	69877004	chr17:69877004:A:C	rs12103827	A	C	A	SOX2_HMG_3	-17	0	+	0	0	.
chr17	69917110	69917111	chr17:69917111:G:A	rs146456539	G	A	G	SOX2_HMG_3	31	0	-	0	0	.
chr17	70041592	70041593	chr17:70041593:A:G	rs76800240	A	G	A	SOX2_HMG_3	6	1	-	2.0629800760338837	-4.845774703281338	GGACATTATTATTGAGG
chr17	70044888	70044889	chr17:70044889:G:A	rs11871263	G	A	G	SOX2_HMG_3	7	1	-	5.318533591849899	10.006665298552338	AAACAATCATATTGAGA
chr17	70073207	70073208	chr17:70073208:T:C	rs8070382	T	C	C	SOX2_HMG_3	24	0	-	0	0	.
chr17	70074391	70074392	chr17:70074392:C:T	rs11656778	C	T	C	SOX2_HMG_3	18	0	-	0	0	.
chr17	70074392	70074393	chr17:70074393:A:G	rs1990197	A	G	A	SOX2_HMG_3	17	0	-	0	0	.
chr17	70076144	70076145	chr17:70076145:G:C	rs8080091	G	C	G	SOX2_HMG_3	-8	0	-	0	0	.
chr17	70127277	70127278	chr17:70127278:C:T	rs775760300	C	T	C	SOX2_HMG_3	-18	0	-	0	0	.
chr17	70164740	70164741	chr17:70164741:A:T	rs750034914	A	T	A	SOX2_HMG_3	-15	0	+	0	0	.
chr17	70164759	70164760	chr17:70164760:A:G	rs8066863	A	G	A	SOX2_HMG_3	4	1	+	1.0427047920482906	-5.866049987266928	CCCCAGTGGCAGTGATG
chr17	70330196	70330197	chr17:70330197:T:C	rs312691	T	C	T	SOX2_HMG_3	22	0	-	0	0	.
chr17	70551530	70551531	chr17:70551531:A:G	rs35813361	A	G	A	SOX2_HMG_3	35	0	-	0	0	.
chr17	70810598	70810599	chr17:70810599:G:A	rs7213302	G	A	G	SOX2_HMG_3	-11	0	+	0	0	.
chr17	70912952	70912953	chr17:70912953:T:A	rs41368245	T	A	T	SOX2_HMG_3	28	0	+	0	0	.
chr17	70924993	70924994	chr17:70924994:A:G	rs11870183	A	G	A	SOX2_HMG_3	28	0	-	0	0	.
chr17	71461079	71461080	chr17:71461080:G:A	rs552717422	G	A	G	SOX2_HMG_3	27	0	+	0	0	.
chr17	71739856	71739857	chr17:71739857:C:T	rs76161194	C	T	C	SOX2_HMG_3	34	0	-	0	0	.
chr17	71801927	71801928	chr17:71801928:T:C	rs9901738	T	C	C	SOX2_HMG_3	-7	0	-	0	0	.
chr17	71801928	71801929	chr17:71801929:G:A	rs9893331	G	A	G	SOX2_HMG_3	-8	0	-	0	0	.
chr17	71859556	71859557	chr17:71859557:A:G	rs6501509	A	G	g	SOX2_HMG_3	5	1	+	2.1204584876209696	-4.78829629169425	GTGCAATGGCAGCGATT
chr17	71921678	71921679	chr17:71921679:C:T	rs12941303	C	T	C	SOX2_HMG_3	8	1	-	5.449939193652721	4.600895246289092	AGTCAAATGCATTGAGG
chr17	71939845	71939846	chr17:71939846:G:A	rs78000080	G	A	G	SOX2_HMG_3	-16	0	+	0	0	.
chr17	71976246	71976247	chr17:71976247:A:G	rs76815116	A	G	A	SOX2_HMG_3	5	1	+	1.210449060726625	-5.698305718588594	GAGCAATGGAAGGGAGC
chr17	71976270	71976271	chr17:71976271:T:C	rs79092487	T	C	T	SOX2_HMG_3	29	0	+	0	0	.
chr17	72023169	72023170	chr17:72023170:T:C	rs142589951	T	C	T	SOX2_HMG_3	0	1	-	3.7992860873270833	4.019880366412377	AGTAAATTAAAGTGATG
chr17	72053679	72053680	chr17:72053680:G:A	rs564767727	G	A	G	SOX2_HMG_3	34	0	-	0	0	.
chr17	72053688	72053689	chr17:72053689:C:T	rs79649062	C	T	C	SOX2_HMG_3	25	0	-	0	0	.
chr17	72137035	72137036	chr17:72137036:G:A	rs759499	G	A	G	SOX2_HMG_3	0	1	+	6.791143764075201	6.5705494849899075	GTTCAATGGCAGTTATG
chr17	72345221	72345222	chr17:72345222:A:C	rs542425817	A	C	A	SOX2_HMG_3	9	1	-	2.671978552472989	-3.7673718186271095	CAGCAATAATATTGCAG
chr17	72397809	72397810	chr17:72397810:C:T	rs118130094	C	T	C	SOX2_HMG_3	36	0	+	0	0	.
chr17	72527900	72527901	chr17:72527901:G:A	rs78025287	G	A	G	SOX2_HMG_3	-16	0	-	0	0	.
chr17	72617015	72617016	chr17:72617016:T:C	rs9889692	T	C	C	SOX2_HMG_3	-13	0	-	0	0	.
chr17	72710155	72710156	chr17:72710156:T:C	rs16977337	T	C	T	SOX2_HMG_3	23	0	-	0	0	.
chr17	72729981	72729982	chr17:72729982:C:T	rs7221363	C	T	T	SOX2_HMG_3	19	0	-	0	0	.
chr17	72783625	72783626	chr17:72783626:C:T	rs2567524	C	T	C	SOX2_HMG_3	-14	0	-	0	0	.
chr17	72788937	72788938	chr17:72788938:A:G	rs752237906	A	G	A	SOX2_HMG_3	27	0	+	0	0	.
chr17	72893176	72893177	chr17:72893177:C:T	rs148098720	C	T	C	SOX2_HMG_3	30	0	+	0	0	.
chr17	72968917	72968918	chr17:72968918:G:A	rs57807740	G	A	G	SOX2_HMG_3	31	0	+	0	0	.
chr17	72993306	72993307	chr17:72993307:G:C	rs8080174	G	C	C	SOX2_HMG_3	33	0	-	0	0	.
chr17	73045976	73045977	chr17:73045977:G:A	rs115759198	G	A	A	SOX2_HMG_3	24	0	-	0	0	.
chr17	73103815	73103816	chr17:73103816:T:G	rs2172543	T	G	G	SOX2_HMG_3	8	1	-	4.6594809509729656	4.774256465565393	GATCCATGAAATTGTGA
chr17	73103834	73103835	chr17:73103835:T:C	rs2172542	T	C	C	SOX2_HMG_3	-11	0	-	0	0	.
chr17	73315406	73315407	chr17:73315407:T:C	rs1466824	T	C	C	SOX2_HMG_3	-11	0	+	0	0	.
chr17	73420159	73420160	chr17:73420160:G:T	rs118130815	G	T	G	SOX2_HMG_3	27	0	-	0	0	.
chr17	73420171	73420172	chr17:73420172:T:C	rs144205581	T	C	T	SOX2_HMG_3	15	1	-	2.941647394330958	2.509173812780057	CAGCAATGCCAGAGAAA
chr17	73420192	73420193	chr17:73420193:T:C	rs12232515	T	C	C	SOX2_HMG_3	-6	0	-	0	0	.
chr17	73909451	73909452	chr17:73909452:A:T	rs73996865	A	T	A	SOX2_HMG_3	10	1	+	3.361791986295078	-3.5469627930201426	TATTAATGTCAGTGGAA
chr17	73973074	73973075	chr17:73973075:C:T	chr17:73973075:C:T	C	T	C	SOX2_HMG_3	-14	0	+	0	0	.
chr17	74125881	74125882	chr17:74125882:C:T	rs117337271	C	T	C	SOX2_HMG_3	-14	0	-	0	0	.
chr17	74157266	74157267	chr17:74157267:G:A	rs72848205	G	A	G	SOX2_HMG_3	22	0	+	0	0	.
chr17	74253089	74253090	chr17:74253090:C:A	rs9899862	C	A	C	SOX2_HMG_3	16	1	-	6.65899232244079	5.8559218806646	CATCAATGTCATCGTAG
chr17	74490128	74490129	chr17:74490129:G:A	rs4789066	G	A	g	SOX2_HMG_3	-7	0	-	0	0	.
chr17	74538735	74538736	chr17:74538736:G:A	rs11654726	G	A	G	SOX2_HMG_3	-7	0	-	0	0	.
chr17	74639766	74639767	chr17:74639767:C:A	rs556509	C	A	A	SOX2_HMG_3	7	1	-	1.620290271057904	-0.424420233675632	AGTCCATGACACTGATG
chr17	74675174	74675175	chr17:74675175:G:A	rs11655369	G	A	G	SOX2_HMG_3	30	0	+	0	0	.
chr17	74685801	74685802	chr17:74685802:C:T	rs12451231	C	T	C	SOX2_HMG_3	-9	0	+	0	0	.
chr17	74800712	74800713	chr17:74800713:C:T	rs1163037179	C	T	C	SOX2_HMG_3	6	1	+	1.8643381868787567	8.773092966193978	TTTCAACGTCAGTGGTG
chr17	75093575	75093576	chr17:75093576:G:T	rs60903053	G	T	G	SOX2_HMG_3	-20	0	+	0	0	.
chr17	75093610	75093611	chr17:75093611:G:A	rs4789134	G	A	G	SOX2_HMG_3	15	1	+	0.5110860094182134	0.9435595909691141	CCACATTGGCAGTGAGG
chr17	75238746	75238747	chr17:75238747:A:G	rs3178020	A	G	A	SOX2_HMG_3	17	0	-	0	0	.
chr17	75288349	75288350	chr17:75288350:A:C	chr17:75288350:A:C	A	C	A	SOX2_HMG_3	-19	0	-	0	0	.
chr17	75294499	75294500	chr17:75294500:C:A	rs11654678	C	A	c	SOX2_HMG_3	8	1	+	4.784375844209023	4.669600329616596	ACTCAATGCAAGTAATG
chr17	75294523	75294524	chr17:75294524:A:G	rs78515399	A	G	a	SOX2_HMG_3	32	0	+	0	0	.
chr17	75316102	75316103	chr17:75316103:G:A	rs8072449	G	A	G	SOX2_HMG_3	25	0	-	0	0	.
chr17	75340863	75340864	chr17:75340864:T:G	rs55681135	T	G	T	SOX2_HMG_3	0	1	+	10.85535923054388	11.737755110303867	TAACAATTTTAGTGATG
chr17	75487668	75487669	chr17:75487669:G:A	rs115798673	G	A	G	SOX2_HMG_3	18	0	+	0	0	.
chr17	75587850	75587851	chr17:75587851:T:C	rs707711	T	C	C	SOX2_HMG_3	10	1	-	3.8823046231517946	-3.026450156163426	CAACAATGGAATAGAGG
chr17	75666770	75666771	chr17:75666771:T:A	chr17:75666771:T:A	T	A	T	SOX2_HMG_3	6	1	+	5.014747805897718	-1.894006973417502	GCTCAATGAAAATGAAA
chr17	75780104	75780105	chr17:75780105:T:C	rs73352125	T	C	T	SOX2_HMG_3	-5	0	+	0	0	.
chr17	76039362	76039363	chr17:76039363:G:A	rs17498898	G	A	G	SOX2_HMG_3	31	0	+	0	0	.
chr17	76232595	76232596	chr17:76232596:T:C	rs78438390	T	C	T	SOX2_HMG_3	34	0	+	0	0	.
chr17	76372179	76372180	chr17:76372180:A:G	rs9910399	A	G	A	SOX2_HMG_3	-19	0	+	0	0	.
chr17	76372226	76372227	chr17:76372227:G:A	rs147936921	G	A	G	SOX2_HMG_3	28	0	+	0	0	.
chr17	76671916	76671917	chr17:76671917:C:T	chr17:76671917:C:T	C	T	C	SOX2_HMG_3	26	0	+	0	0	.
chr17	76773401	76773402	chr17:76773402:G:A	rs11868654	G	A	A	SOX2_HMG_3	9	1	-	5.200602030571957	6.007272164509003	CATCAAAAACAGTGATA
chr17	76858302	76858303	chr17:76858303:C:T	rs181181555	C	T	C	SOX2_HMG_3	-15	0	-	0	0	.
chr17	76989797	76989798	chr17:76989798:G:C	rs8070778	G	C	C	SOX2_HMG_3	28	0	-	0	0	.
chr17	77090866	77090867	chr17:77090867:G:A	rs9913954	G	A	G	SOX2_HMG_3	13	1	+	2.059704618595184	-4.849050160720036	GACCCATGCCAGTGATC
chr17	77099081	77099082	chr17:77099082:G:A	rs2292853	G	A	G	SOX2_HMG_3	25	0	+	0	0	.
chr17	77152912	77152913	chr17:77152913:C:T	rs72882061	C	T	C	SOX2_HMG_3	7	1	-	2.85001609070123	0.12122897013989431	AATCAATGGCATGAAAG
chr17	77177137	77177138	chr17:77177138:C:T	rs12452427	C	T	C	SOX2_HMG_3	26	0	+	0	0	.
chr17	77341498	77341499	chr17:77341499:G:A	rs577719258	G	A	G	SOX2_HMG_3	32	0	+	0	0	.
chr17	77401304	77401305	chr17:77401305:T:C	rs4789493	T	C	C	SOX2_HMG_3	-13	0	-	0	0	.
chr17	77479517	77479518	chr17:77479518:A:C	rs2627211	A	C	C	SOX2_HMG_3	-14	0	+	0	0	.
chr17	77741564	77741565	chr17:77741565:C:T	rs9907463	C	T	C	SOX2_HMG_3	-18	0	-	0	0	.
chr17	77858124	77858125	chr17:77858125:G:C	rs59053333	G	C	C	SOX2_HMG_3	22	0	-	0	0	.
chr17	77963742	77963743	chr17:77963743:A:C	rs4789522	A	C	C	SOX2_HMG_3	5	1	+	4.2779300285393775	-2.6308247507758447	ACTCAATGTTATTTTGA
chr17	78200531	78200532	chr17:78200532:T:C	rs77336916	T	C	T	SOX2_HMG_3	5	1	-	7.494649698386258	0.5858949190710369	AGTCAATGGCATTTAGG
chr17	78445901	78445902	chr17:78445902:A:G	rs12451298	A	G	G	SOX2_HMG_3	-20	0	-	0	0	.
chr17	78506724	78506725	chr17:78506725:C:T	rs76449350	C	T	.	SOX2_HMG_3	-3	0	+	0	0	.
chr17	78650420	78650421	chr17:78650421:G:A	rs7210405	G	A	G	SOX2_HMG_3	-18	0	+	0	0	.
chr17	78738783	78738784	chr17:78738784:T:C	rs74682389	T	C	T	SOX2_HMG_3	25	0	-	0	0	.
chr17	78817349	78817350	chr17:78817350:C:T	rs1043946085	C	T	C	SOX2_HMG_3	34	0	-	0	0	.
chr17	78922889	78922890	chr17:78922890:A:G	rs11654008	A	G	G	SOX2_HMG_3	26	0	+	0	0	.
chr17	79305736	79305737	chr17:79305737:C:A	rs372962035	C	A	C	SOX2_HMG_3	33	0	-	0	0	.
chr17	79316502	79316503	chr17:79316503:G:A	rs12600462	G	A	G	SOX2_HMG_3	-5	0	+	0	0	.
chr17	79358577	79358578	chr17:79358578:A:G	rs35405259	A	G	A	SOX2_HMG_3	-2	0	-	0	0	.
chr17	79375094	79375095	chr17:79375095:T:A	rs907910	T	A	A	SOX2_HMG_3	0	1	-	1.7279978338965052	1.0661962332218116	ATTCAATGGCAGGGACC
chr17	79384624	79384625	chr17:79384625:G:C	rs8075631	G	C	C	SOX2_HMG_3	-18	0	+	0	0	.
chr17	79396926	79396927	chr17:79396927:A:T	rs1479485692	A	T	A	SOX2_HMG_3	10	1	+	1.7151336327922957	-5.193621146522924	CATCCATGGTAGGGAAG
chr17	79456728	79456729	chr17:79456729:C:T	rs869442	C	T	C	SOX2_HMG_3	-6	0	-	0	0	.
chr17	79559117	79559118	chr17:79559118:A:G	rs955628145	A	G	A	SOX2_HMG_3	22	0	-	0	0	.
chr17	79648447	79648448	chr17:79648448:G:C	rs926397720	G	C	g	SOX2_HMG_3	-5	0	+	0	0	.
chr17	79648486	79648487	chr17:79648487:T:C	rs901321548	T	C	c	SOX2_HMG_3	34	0	+	0	0	.
chr17	79651864	79651865	chr17:79651865:C:A	rs1224160559	C	A	c	SOX2_HMG_3	21	0	-	0	0	.
chr17	79775777	79775778	chr17:79775778:G:A	rs564314871	G	A	G	SOX2_HMG_3	35	0	-	0	0	.
chr17	79904816	79904817	chr17:79904817:T:A	rs732573	T	A	A	SOX2_HMG_3	10	1	-	4.392273597307232	-2.516481182007988	GGACCATGACATTGATA
chr17	79922067	79922068	chr17:79922068:G:C	rs2120453	G	C	G	SOX2_HMG_3	31	0	-	0	0	.
chr17	79922115	79922116	chr17:79922116:A:G	rs2034126	A	G	A	SOX2_HMG_3	-17	0	-	0	0	.
chr17	80045890	80045891	chr17:80045891:C:T	rs34681986	C	T	C	SOX2_HMG_3	33	0	-	0	0	.
chr17	80107907	80107908	chr17:80107908:G:A	rs2252455	G	A	G	SOX2_HMG_3	25	0	+	0	0	.
chr17	80116281	80116282	chr17:80116282:G:A	rs12452616	G	A	G	SOX2_HMG_3	-9	0	+	0	0	.
chr17	80187283	80187284	chr17:80187284:C:T	rs767078968	C	T	C	SOX2_HMG_3	-20	0	-	0	0	.
chr17	80211842	80211843	chr17:80211843:G:A	rs2269374	G	A	A	SOX2_HMG_3	30	0	+	0	0	.
chr17	80313180	80313181	chr17:80313181:C:T	rs200773996	C	T	C	SOX2_HMG_3	29	0	+	0	0	.
chr17	80313185	80313186	chr17:80313186:G:C	rs78857404	G	C	G	SOX2_HMG_3	34	0	+	0	0	.
chr17	80315736	80315737	chr17:80315737:T:C	rs62648777	T	C	-	SOX2_HMG_3	36	0	+	0	0	.
chr17	80345335	80345336	chr17:80345336:G:A	rs9674961	G	A	A	SOX2_HMG_3	26	0	+	0	0	.
chr17	80364640	80364641	chr17:80364641:G:A	chr17:80364641:G:A	G	A	G	SOX2_HMG_3	-12	0	-	0	0	.
chr17	80539479	80539480	chr17:80539480:G:A	rs4889855	G	A	A	SOX2_HMG_3	11	1	-	2.2630089300079113	8.955700428240258	AATCAAGGGCACTGAAT
chr17	80544607	80544608	chr17:80544608:G:A	rs4890040	G	A	a	SOX2_HMG_3	1	1	+	4.068157281995861	5.899804872075151	TGACAATGTTTTTGAAA
chr17	80635132	80635133	chr17:80635133:C:G	rs62068351	C	G	C	SOX2_HMG_3	23	0	-	0	0	.
chr17	80639908	80639909	chr17:80639909:G:T	rs149863756	G	T	G	SOX2_HMG_3	28	0	-	0	0	.
chr17	80761401	80761402	chr17:80761402:A:G	rs8080789	A	G	A	SOX2_HMG_3	1	1	+	4.309630645237567	2.477983055158276	TATAAATGTTAATGATA
chr17	80818065	80818066	chr17:80818066:C:T	rs9907099	C	T	C	SOX2_HMG_3	32	0	+	0	0	.
chr17	80860154	80860155	chr17:80860155:G:A	rs56296322	G	A	A	SOX2_HMG_3	32	0	-	0	0	.
chr17	80947316	80947317	chr17:80947317:C:T	rs4969231	C	T	C	SOX2_HMG_3	-8	0	-	0	0	.
chr17	81053495	81053496	chr17:81053496:A:G	rs8080252	A	G	A	SOX2_HMG_3	6	1	-	5.228794253724113	-1.6799605255911072	GATCAATGTCCTTGGGA
chr17	81181315	81181316	chr17:81181316:A:G	rs906180	A	G	G	SOX2_HMG_3	-11	0	-	0	0	.
chr17	81295805	81295806	chr17:81295806:C:A	rs59063862	C	A	A	SOX2_HMG_3	-13	0	+	0	0	.
chr17	81408209	81408210	chr17:81408210:G:A	rs62072956	G	A	g	SOX2_HMG_3	15	1	+	4.624218292798494	5.0566918743493945	GATCAATTCCAGTGCGT
chr17	81497108	81497109	chr17:81497109:C:A	rs12939651	C	A	c	SOX2_HMG_3	23	0	+	0	0	.
chr17	81511518	81511519	chr17:81511519:G:A	rs11549222	G	A	G	SOX2_HMG_3	-14	0	+	0	0	.
chr17	81863390	81863391	chr17:81863391:G:T	rs113437492	G	T	G	SOX2_HMG_3	8	1	+	3.5640455969527776	3.7015135168174402	CATAAATGGTTTTGATT
chr17	81924919	81924920	chr17:81924920:A:C	rs186426854	A	C	A	SOX2_HMG_3	25	0	+	0	0	.
chr17	82238481	82238482	chr17:82238482:T:G	rs117195347	T	G	T	SOX2_HMG_3	4	1	-	2.084107008298519	-4.8246477710167	TAGCAATGGCTTTGTGG
chr17	82332293	82332294	chr17:82332294:G:A	rs530766499	G	A	A	SOX2_HMG_3	-9	0	+	0	0	.
chr17	82458037	82458038	chr17:82458038:A:G	rs7209788	A	G	A	SOX2_HMG_3	-16	0	+	0	0	.
chr17	82458080	82458081	chr17:82458081:T:C	rs145470217	T	C	C	SOX2_HMG_3	27	0	+	0	0	.
chr17	82506720	82506721	chr17:82506721:G:A	rs1224117960	G	A	g	SOX2_HMG_3	7	1	+	2.1271066365059825	-0.6016804840553518	GACTAATGACATTGAAC
chr17	82506737	82506738	chr17:82506738:T:C	rs9901463	T	C	N	SOX2_HMG_3	24	0	+	0	0	.
chr17	82559512	82559513	chr17:82559513:C:T	rs191998042	C	T	C	SOX2_HMG_3	-18	0	+	0	0	.
chr17	82559543	82559544	chr17:82559544:G:T	rs78610922	G	T	G	SOX2_HMG_3	13	1	+	2.3949806252462422	-4.513774154068978	GCTCATTAGCAGTGAGG
chr17	82848726	82848727	chr17:82848727:C:G	rs56249965	C	G	C	SOX2_HMG_3	-13	0	+	0	0	.
chr17	82860620	82860621	chr17:82860621:C:T	rs77346257	C	T	C	SOX2_HMG_3	16	1	-	1.293265508638015	1.0195778922477436	CATCAAAGCCAGTGGCG
chr17	82889839	82889840	chr17:82889840:A:G	rs75071623	A	G	A	SOX2_HMG_3	29	0	+	0	0	.
chr17	83008779	83008780	chr17:83008780:G:T	rs11658065	G	T	g	SOX2_HMG_3	-7	0	-	0	0	.
chr17	83091817	83091818	chr17:83091818:T:C	rs548513306	T	C	t	SOX2_HMG_3	24	0	+	0	0	.
chr17	83105941	83105942	chr17:83105942:C:T	rs28459602	C	T	T	SOX2_HMG_3	-2	0	-	0	0	.
chr18	141995	141996	chr18:141996:T:A	rs12604980	T	A	.	SOX2_HMG_3	-1	0	-	0	0	.
chr18	286037	286038	chr18:286038:G:C	rs62073534	G	C	G	SOX2_HMG_3	9	1	+	2.6345992810325027	8.267279518195556	GATGAATGTGAGTGAGG
chr18	352073	352074	chr18:352074:C:T	rs654312	C	T	C	SOX2_HMG_3	26	0	+	0	0	.
chr18	706588	706589	chr18:706589:A:G	rs2612102	A	G	G	SOX2_HMG_3	-14	0	+	0	0	.
chr18	841269	841270	chr18:841270:T:G	rs9964297	T	G	T	SOX2_HMG_3	-7	0	-	0	0	.
chr18	854048	854049	chr18:854049:T:C	rs55983927	T	C	t	SOX2_HMG_3	18	0	-	0	0	.
chr18	885505	885506	chr18:885506:T:G	rs2846822	T	G	T	SOX2_HMG_3	-11	0	-	0	0	.
chr18	1768438	1768439	chr18:1768439:T:A	rs16942037	T	A	T	SOX2_HMG_3	-20	0	+	0	0	.
chr18	1998585	1998586	chr18:1998586:A:T	rs8090902	A	T	T	SOX2_HMG_3	-9	0	-	0	0	.
chr18	2418512	2418513	chr18:2418513:T:C	rs143810338	T	C	T	SOX2_HMG_3	26	0	+	0	0	.
chr18	2850882	2850883	chr18:2850883:C:A	rs117088495	C	A	A	SOX2_HMG_3	24	0	+	0	0	.
chr18	2850894	2850895	chr18:2850895:G:A	rs116204850	G	A	G	SOX2_HMG_3	36	0	+	0	0	.
chr18	2889993	2889994	chr18:2889994:T:A	rs116052095	T	A	T	SOX2_HMG_3	34	0	+	0	0	.
chr18	2922997	2922998	chr18:2922998:G:A	rs11660930	G	A	G	SOX2_HMG_3	7	1	+	3.391075518358224	0.6622883977968901	GATCAATGTAATATATG
chr18	3011743	3011744	chr18:3011744:G:C	rs58940048	G	C	G	SOX2_HMG_3	17	0	+	0	0	.
chr18	3011744	3011745	chr18:3011745:G:C	rs59096963	G	C	G	SOX2_HMG_3	18	0	+	0	0	.
chr18	3149154	3149155	chr18:3149155:C:T	rs36098676	C	T	T	SOX2_HMG_3	18	0	-	0	0	.
chr18	3178168	3178169	chr18:3178169:G:A	rs192819678	G	A	G	SOX2_HMG_3	15	1	-	2.1863474250428006	5.02905658121966	AATCAGGGTTATTGACG
chr18	3281280	3281281	chr18:3281281:T:C	rs7407066	T	C	c	SOX2_HMG_3	12	1	+	3.927494370575665	-2.9812604087395544	CAGCAATTATACTGATT
chr18	3319211	3319212	chr18:3319212:A:G	rs1785265	A	G	A	SOX2_HMG_3	-2	0	+	0	0	.
chr18	3468802	3468803	chr18:3468803:A:G	rs8083002	A	G	A	SOX2_HMG_3	-3	0	+	0	0	.
chr18	3747513	3747514	chr18:3747514:C:G	rs8095503	C	G	c	SOX2_HMG_3	-8	0	+	0	0	.
chr18	3873446	3873447	chr18:3873447:A:C	rs3910707	A	C	A	SOX2_HMG_3	9	1	+	2.969293942212763	4.021199150222445	CATCAATGAATGTGGTG
chr18	4193142	4193143	chr18:4193143:A:T	rs11878026	A	T	A	SOX2_HMG_3	26	0	+	0	0	.
chr18	4369604	4369605	chr18:4369605:C:T	rs28496698	C	T	C	SOX2_HMG_3	26	0	-	0	0	.
chr18	4369633	4369634	chr18:4369634:G:A	chr18:4369634:G:A	G	A	G	SOX2_HMG_3	-3	0	-	0	0	.
chr18	4403920	4403921	chr18:4403921:T:C	rs2320213	T	C	T	SOX2_HMG_3	-15	0	-	0	0	.
chr18	4415793	4415794	chr18:4415794:A:G	rs281017	A	G	A	SOX2_HMG_3	-7	0	+	0	0	.
chr18	4679038	4679039	chr18:4679039:C:G	rs11664043	C	G	C	SOX2_HMG_3	22	0	-	0	0	.
chr18	4797073	4797074	chr18:4797074:A:G	rs6506251	A	G	A	SOX2_HMG_3	27	0	+	0	0	.
chr18	4840181	4840182	chr18:4840182:C:T	rs4383244	C	T	C	SOX2_HMG_3	32	0	-	0	0	.
chr18	4947183	4947184	chr18:4947184:A:G	rs8092847	A	G	A	SOX2_HMG_3	14	1	-	7.536034648644658	3.4165097878922586	TTTCAATTGCATTGTGA
chr18	5029736	5029737	chr18:5029737:G:A	rs8087779	G	A	G	SOX2_HMG_3	17	0	+	0	0	.
chr18	5029744	5029745	chr18:5029745:A:G	rs8089379	A	G	G	SOX2_HMG_3	25	0	+	0	0	.
chr18	5237162	5237163	chr18:5237163:C:G	rs9956056	C	G	C	SOX2_HMG_3	11	1	-	11.178823371379352	5.903211842366954	CAGCAATGTAAGTGATG
chr18	5577258	5577259	chr18:5577259:T:C	rs11876037	T	C	C	SOX2_HMG_3	25	0	-	0	0	.
chr18	5887633	5887634	chr18:5887634:C:T	rs7504258	C	T	C	SOX2_HMG_3	33	0	-	0	0	.
chr18	5947874	5947875	chr18:5947875:G:A	rs1893192	G	A	G	SOX2_HMG_3	34	0	+	0	0	.
chr18	5983703	5983704	chr18:5983704:T:C	rs189949247	T	C	T	SOX2_HMG_3	6	1	+	9.611689429627088	2.702934650311865	ACACAATGGCAGTGATG
chr18	5983730	5983731	chr18:5983731:A:G	rs572933	A	G	A	SOX2_HMG_3	33	0	+	0	0	.
chr18	6113150	6113151	chr18:6113151:A:T	rs11876188	A	T	A	SOX2_HMG_3	20	0	+	0	0	.
chr18	6505597	6505598	chr18:6505598:G:A	rs11873891	G	A	A	SOX2_HMG_3	7	1	+	5.064152673333524	2.3353655527721884	ATGCAATGTTATTTATG
chr18	6613658	6613659	chr18:6613659:C:T	rs7241769	C	T	C	SOX2_HMG_3	18	0	-	0	0	.
chr18	6638822	6638823	chr18:6638823:G:A	rs1941502	G	A	G	SOX2_HMG_3	-5	0	+	0	0	.
chr18	6638825	6638826	chr18:6638826:T:A	rs79303377	T	A	T	SOX2_HMG_3	-2	0	+	0	0	.
chr18	6668906	6668907	chr18:6668907:C:T	rs181072965	C	T	C	SOX2_HMG_3	-4	0	-	0	0	.
chr18	6723126	6723127	chr18:6723127:A:G	rs11081262	A	G	G	SOX2_HMG_3	1	1	-	3.6114016921113508	3.6114016921113508	ATTCAATTTATGTGATG
chr18	6752743	6752744	chr18:6752744:C:T	rs1481451505	C	T	C	SOX2_HMG_3	-12	0	+	0	0	.
chr18	6752783	6752784	chr18:6752784:G:A	rs72882597	G	A	G	SOX2_HMG_3	28	0	+	0	0	.
chr18	6955676	6955677	chr18:6955677:G:T	rs949215	G	T	T	SOX2_HMG_3	36	0	-	0	0	.
chr18	6997818	6997819	chr18:6997819:A:C	rs12961939	A	C	A	SOX2_HMG_3	24	0	+	0	0	.
chr18	7113139	7113140	chr18:7113140:T:G	rs16951262	T	G	T	SOX2_HMG_3	4	1	-	8.830826771008873	1.9220719916936537	GCTCAATGCTATTGTCT
chr18	7146003	7146004	chr18:7146004:C:G	rs62082797	C	G	C	SOX2_HMG_3	-19	0	+	0	0	.
chr18	7373677	7373678	chr18:7373678:A:G	rs6506501	A	G	G	SOX2_HMG_3	29	0	-	0	0	.
chr18	7823286	7823287	chr18:7823287:A:G	rs941719027	A	G	A	SOX2_HMG_3	-16	0	+	0	0	.
chr18	7857044	7857045	chr18:7857045:C:T	rs72893380	C	T	C	SOX2_HMG_3	7	1	-	4.378608915386899	1.6498217948255636	GAGCAATGATAGGGAAA
chr18	7993104	7993105	chr18:7993105:G:A	rs1596383	G	A	A	SOX2_HMG_3	-7	0	-	0	0	.
chr18	8028803	8028804	chr18:8028804:G:A	rs145334821	G	A	G	SOX2_HMG_3	-14	0	-	0	0	.
chr18	8092069	8092070	chr18:8092070:T:A	rs523280	T	A	T	SOX2_HMG_3	-8	0	-	0	0	.
chr18	8626595	8626596	chr18:8626596:T:G	rs321653	T	G	G	SOX2_HMG_3	34	0	-	0	0	.
chr18	8662962	8662963	chr18:8662963:G:A	rs4798668	G	A	G	SOX2_HMG_3	25	0	+	0	0	.
chr18	8730241	8730242	chr18:8730242:A:T	rs2017162	A	T	T	SOX2_HMG_3	-19	0	+	0	0	.
chr18	8769264	8769265	chr18:8769265:A:C	rs624193	A	C	A	SOX2_HMG_3	17	0	+	0	0	.
chr18	8772316	8772317	chr18:8772317:C:T	rs775286	C	T	T	SOX2_HMG_3	21	0	-	0	0	.
chr18	8867836	8867837	chr18:8867837:C:T	rs632355	C	T	C	SOX2_HMG_3	15	1	-	3.7042444422153915	4.136718023766292	GTTCAATTCCAATGAGA
chr18	9631996	9631997	chr18:9631997:C:A	rs984562651	C	A	C	SOX2_HMG_3	2	1	+	2.6746501648224856	3.8104074004600323	AACCAAAGTTAGTGACG
chr18	9673273	9673274	chr18:9673274:T:C	rs73942142	T	C	T	SOX2_HMG_3	4	1	-	4.1413935072454295	-2.7673612720697904	GGTCAATGCAGGTGAAT
chr18	9870933	9870934	chr18:9870934:C:G	rs73940076	C	G	C	SOX2_HMG_3	24	0	-	0	0	.
chr18	9915565	9915566	chr18:9915566:A:G	rs74544606	A	G	G	SOX2_HMG_3	-12	0	+	0	0	.
chr18	10122128	10122129	chr18:10122129:G:A	rs1941066	G	A	G	SOX2_HMG_3	33	0	+	0	0	.
chr18	10148108	10148109	chr18:10148109:A:G	rs144836593	A	G	A	SOX2_HMG_3	10	1	+	1.8385778938806074	-5.070176885434612	AGTCACTGGGAGTGATA
chr18	10250869	10250870	chr18:10250870:T:C	rs117802637	T	C	T	SOX2_HMG_3	11	1	-	2.2562713037672877	7.5318828327796865	AATCAACTGCAATGATG
chr18	10323604	10323605	chr18:10323605:C:G	rs206622	C	G	G	SOX2_HMG_3	-13	0	+	0	0	.
chr18	10323639	10323640	chr18:10323640:A:G	rs206621	A	G	A	SOX2_HMG_3	22	0	+	0	0	.
chr18	10441472	10441473	chr18:10441473:A:G	rs11665266	A	G	A	SOX2_HMG_3	5	1	+	4.652116775638378	-2.256638003676843	GCCCAATGTCAGTGGTG
chr18	10477606	10477607	chr18:10477607:T:C	rs666064	T	C	C	SOX2_HMG_3	19	0	+	0	0	.
chr18	10640994	10640995	chr18:10640995:A:G	rs573761	A	G	N	SOX2_HMG_3	11	1	-	4.44536693461221	-2.2473245636201367	AGGCAGTGACATTGATG
chr18	10715852	10715853	chr18:10715853:A:G	rs28712767	A	G	G	SOX2_HMG_3	14	1	-	6.617123135812111	2.497598275059712	AATCAATGGTATTTTGT
chr18	11044737	11044738	chr18:11044738:C:T	rs2660248	C	T	C	SOX2_HMG_3	-16	0	-	0	0	.
chr18	11154165	11154166	chr18:11154166:G:T	rs8091743	G	T	G	SOX2_HMG_3	-18	0	+	0	0	.
chr18	11176068	11176069	chr18:11176069:T:G	rs1542836	T	G	T	SOX2_HMG_3	21	0	-	0	0	.
chr18	11483973	11483974	chr18:11483974:T:G	rs495434	T	G	T	SOX2_HMG_3	-3	0	-	0	0	.
chr18	11483979	11483980	chr18:11483980:A:C	rs572045	A	C	A	SOX2_HMG_3	-9	0	-	0	0	.
chr18	11553842	11553843	chr18:11553843:T:C	rs1551898	T	C	.	SOX2_HMG_3	27	0	-	0	0	.
chr18	11655631	11655632	chr18:11655632:T:G	rs77734514	T	G	G	SOX2_HMG_3	-15	0	+	0	0	.
chr18	11695551	11695552	chr18:11695552:A:G	rs17515325	A	G	A	SOX2_HMG_3	-2	0	+	0	0	.
chr18	11923736	11923737	chr18:11923737:A:G	chr18:11923737:A:G	A	G	-	SOX2_HMG_3	4	1	+	10.951299493306589	4.042544713991369	AATCAGTGATATTGATG
chr18	12274940	12274941	chr18:12274941:A:G	rs9303764	A	G	N	SOX2_HMG_3	-15	0	-	0	0	.
chr18	12819616	12819617	chr18:12819617:C:T	rs7227207	C	T	C	SOX2_HMG_3	-15	0	+	0	0	.
chr18	12856078	12856079	chr18:12856079:G:A	rs73404489	G	A	G	SOX2_HMG_3	1	1	+	2.686227892366046	4.517875482445337	GGTCAATGTCAGCGGAG
chr18	12931789	12931790	chr18:12931790:G:A	rs12604538	G	A	G	SOX2_HMG_3	8	1	+	4.553724690123435	3.7046807427598054	TTACAATAGCAGTGAGG
chr18	13067727	13067728	chr18:13067728:G:T	rs7243536	G	T	G	SOX2_HMG_3	-20	0	+	0	0	.
chr18	13067905	13067906	chr18:13067906:T:C	rs150357881	T	C	T	SOX2_HMG_3	5	1	-	8.600032813262908	1.6912780339476872	TATCAATTTTAGTGGGA
chr18	13269520	13269521	chr18:13269521:T:A	rs114485273	T	A	T	SOX2_HMG_3	-19	0	-	0	0	.
chr18	13375410	13375411	chr18:13375411:G:A	rs79563603	G	A	G	SOX2_HMG_3	15	1	+	3.851268258712601	4.283741840263502	ATTCAAAGGAAGTGAGG
chr18	13379477	13379478	chr18:13379478:G:A	rs17681721	G	A	G	SOX2_HMG_3	27	0	+	0	0	.
chr18	13413463	13413464	chr18:13413464:G:A	rs7240292	G	A	G	SOX2_HMG_3	30	0	+	0	0	.
chr18	13496304	13496305	chr18:13496305:G:A	rs55938405	G	A	G	SOX2_HMG_3	-5	0	+	0	0	.
chr18	13590752	13590753	chr18:13590753:A:G	rs4797788	A	G	A	SOX2_HMG_3	-13	0	+	0	0	.
chr18	13745905	13745906	chr18:13745906:T:C	rs8084569	T	C	T	SOX2_HMG_3	7	1	+	4.342937903384675	-0.3451938033177637	GATCAAGTAAAGTGAAA
chr18	14087077	14087078	chr18:14087078:T:C	rs56066761	T	C	t	SOX2_HMG_3	-13	0	+	0	0	.
chr18	21943616	21943617	chr18:21943617:A:T	rs9948997	A	T	A	SOX2_HMG_3	-6	0	-	0	0	.
chr18	22018457	22018458	chr18:22018458:A:G	rs35261883	A	G	A	SOX2_HMG_3	4	1	+	4.089352081044273	-2.8194026982709475	AACCAATGAACTTGATG
chr18	22074544	22074545	chr18:22074545:C:T	rs1479914	C	T	T	SOX2_HMG_3	17	0	-	0	0	.
chr18	22079042	22079043	chr18:22079043:A:G	rs9966969	A	G	G	SOX2_HMG_3	7	1	-	3.5554974197424207	-1.1326342869600168	AGTCAACTACATTGTTG
chr18	22106659	22106660	chr18:22106660:G:A	rs76265129	G	A	G	SOX2_HMG_3	9	1	-	5.755164127406363	6.56183426134341	AGGCAATGACAGTGGTG
chr18	22448672	22448673	chr18:22448673:C:A	rs1352745677	C	A	C	SOX2_HMG_3	-12	0	-	0	0	.
chr18	22448676	22448677	chr18:22448677:A:C	rs1227186832	A	C	A	SOX2_HMG_3	-16	0	-	0	0	.
chr18	22683687	22683688	chr18:22683688:C:T	rs7227521	C	T	C	SOX2_HMG_3	27	0	-	0	0	.
chr18	22692471	22692472	chr18:22692472:T:G	rs529768981	T	G	T	SOX2_HMG_3	24	0	+	0	0	.
chr18	23147646	23147647	chr18:23147647:C:T	rs4800452	C	T	C	SOX2_HMG_3	36	0	+	0	0	.
chr18	23258071	23258072	chr18:23258072:A:G	rs78479391	A	G	A	SOX2_HMG_3	6	1	-	5.043375980923653	-1.8653787983915662	AAACAATGTCAGTCATT
chr18	23295809	23295810	chr18:23295810:G:A	rs2337025	G	A	G	SOX2_HMG_3	21	0	-	0	0	.
chr18	23295828	23295829	chr18:23295829:A:G	rs2337024	A	G	G	SOX2_HMG_3	2	1	-	3.560584846607919	-1.4427872237076682	TATCCACGTCATTGATG
chr18	23524006	23524007	chr18:23524007:T:G	rs891386	T	G	T	SOX2_HMG_3	15	1	-	4.097606677476694	2.489799958016558	ATTCAATTGTAGTCAAG
chr18	23591180	23591181	chr18:23591181:G:A	rs4598991	G	A	G	SOX2_HMG_3	20	0	+	0	0	.
chr18	23835622	23835623	chr18:23835623:T:A	rs4800515	T	A	T	SOX2_HMG_3	-18	0	-	0	0	.
chr18	23969939	23969940	chr18:23969940:T:C	rs9958904	T	C	C	SOX2_HMG_3	33	0	-	0	0	.
chr18	23970664	23970665	chr18:23970665:A:G	rs73400386	A	G	A	SOX2_HMG_3	24	0	-	0	0	.
chr18	24319617	24319618	chr18:24319618:T:C	rs56033359	T	C	T	SOX2_HMG_3	-3	0	+	0	0	.
chr18	24386403	24386404	chr18:24386404:C:T	rs8086289	C	T	T	SOX2_HMG_3	-12	0	+	0	0	.
chr18	24386450	24386451	chr18:24386451:G:A	rs8085403	G	A	G	SOX2_HMG_3	35	0	+	0	0	.
chr18	24701904	24701905	chr18:24701905:T:C	rs7235400	T	C	T	SOX2_HMG_3	-11	0	+	0	0	.
chr18	24763807	24763808	chr18:24763808:C:T	rs7233467	C	T	C	SOX2_HMG_3	35	0	+	0	0	.
chr18	25163934	25163935	chr18:25163935:A:G	rs8085882	A	G	A	SOX2_HMG_3	-13	0	-	0	0	.
chr18	25650444	25650445	chr18:25650445:A:C	rs922168616	A	C	A	SOX2_HMG_3	30	0	-	0	0	.
chr18	25815128	25815129	chr18:25815129:A:C	rs28370288	A	C	C	SOX2_HMG_3	35	0	-	0	0	.
chr18	25854162	25854163	chr18:25854163:C:T	rs1786739	C	T	C	SOX2_HMG_3	0	1	+	5.604085348684555	5.466756370635891	CTGCAATTTAATTGAGA
chr18	25979708	25979709	chr18:25979709:C:T	rs7229674	C	T	C	SOX2_HMG_3	13	1	-	4.675547498186466	-2.233207281128754	AATCAATATTAGGGACA
chr18	26460896	26460897	chr18:26460897:G:A	rs141459070	G	A	G	SOX2_HMG_3	20	0	+	0	0	.
chr18	26787608	26787609	chr18:26787609:C:G	rs11663064	C	G	C	SOX2_HMG_3	10	1	-	4.210465215413081	4.210465215413081	GATCAATGTGGTTGAAA
chr18	27857787	27857788	chr18:27857788:T:C	rs4129156	T	C	t	SOX2_HMG_3	-2	0	+	0	0	.
chr18	27900896	27900897	chr18:27900897:A:T	rs12960084	A	T	T	SOX2_HMG_3	2	1	-	12.04453802271033	8.176923188032289	AGTCAATTTTAGTGAAA
chr18	27901753	27901754	chr18:27901754:A:G	rs12956039	A	G	A	SOX2_HMG_3	-12	0	-	0	0	.
chr18	28387879	28387880	chr18:28387880:G:T	rs7237578	G	T	G	SOX2_HMG_3	22	0	-	0	0	.
chr18	28718915	28718916	chr18:28718916:A:G	rs9952451	A	G	A	SOX2_HMG_3	-12	0	+	0	0	.
chr18	29653920	29653921	chr18:29653921:T:C	rs1492811	T	C	T	SOX2_HMG_3	26	0	-	0	0	.
chr18	30404892	30404893	chr18:30404893:C:T	rs76832839	C	T	C	SOX2_HMG_3	-19	0	+	0	0	.
chr18	30453768	30453769	chr18:30453769:T:C	rs62080024	T	C	C	SOX2_HMG_3	6	1	-	3.7868615162108923	3.7868615162108923	AAGCAAAAGTAGTGATG
chr18	30608963	30608964	chr18:30608964:G:A	rs1478539	G	A	A	SOX2_HMG_3	-17	0	+	0	0	.
chr18	30811848	30811849	chr18:30811849:A:T	rs17711533	A	T	A	SOX2_HMG_3	6	1	-	3.2849044575022734	-3.623850321812947	GTGCAATGTTATTTATC
chr18	31100277	31100278	chr18:31100278:C:T	rs1550236	C	T	C	SOX2_HMG_3	26	0	+	0	0	.
chr18	31166670	31166671	chr18:31166671:A:G	rs8096368	A	G	G	SOX2_HMG_3	10	1	+	3.6740333870278805	-3.234721392287339	AAACAAAATTATTGAGG
chr18	31476680	31476681	chr18:31476681:C:T	rs72925171	C	T	-	SOX2_HMG_3	34	0	+	0	0	.
chr18	31610838	31610839	chr18:31610839:G:A	rs141873227	G	A	G	SOX2_HMG_3	29	0	-	0	0	.
chr18	31610973	31610974	chr18:31610974:T:G	rs963316273	T	G	T	SOX2_HMG_3	30	0	+	0	0	.
chr18	31682463	31682464	chr18:31682464:T:C	rs968325	T	C	T	SOX2_HMG_3	5	1	-	3.676730972030843	-3.2320238072843765	AGGCAATTAGATTGATG
chr18	31706837	31706838	chr18:31706838:T:C	rs1941930	T	C	C	SOX2_HMG_3	26	0	+	0	0	.
chr18	31712154	31712155	chr18:31712155:G:A	rs12326689	G	A	G	SOX2_HMG_3	-5	0	-	0	0	.
chr18	31963240	31963241	chr18:31963241:T:C	rs6506951	T	C	C	SOX2_HMG_3	15	1	+	3.6853049278134877	0.8425957716366295	CCTCAATTATGGTGATA
chr18	32249943	32249944	chr18:32249944:A:G	rs10502586	A	G	g	SOX2_HMG_3	17	0	-	0	0	.
chr18	32298273	32298274	chr18:32298274:C:T	rs77000096	C	T	C	SOX2_HMG_3	-14	0	+	0	0	.
chr18	33135704	33135705	chr18:33135705:A:T	rs271583	A	T	T	SOX2_HMG_3	26	0	+	0	0	.
chr18	33572241	33572242	chr18:33572242:G:T	rs77056525	G	T	G	SOX2_HMG_3	-10	0	-	0	0	.
chr18	34077720	34077721	chr18:34077721:A:G	rs74641960	A	G	A	SOX2_HMG_3	-12	0	-	0	0	.
chr18	34222185	34222186	chr18:34222186:C:T	rs147759424	C	T	C	SOX2_HMG_3	-3	0	-	0	0	.
chr18	34752361	34752362	chr18:34752362:C:G	rs2040299	C	G	C	SOX2_HMG_3	-3	0	+	0	0	.
chr18	34752368	34752369	chr18:34752369:A:G	rs4799777	A	G	G	SOX2_HMG_3	4	1	+	3.967684249657319	-2.9410705296579014	TTTCAAAGGCAGTGAGA
chr18	34767869	34767870	chr18:34767870:A:G	rs73946175	A	G	A	SOX2_HMG_3	-10	0	-	0	0	.
chr18	34773519	34773520	chr18:34773520:A:T	rs575055746	A	T	A	SOX2_HMG_3	-5	0	+	0	0	.
chr18	34852152	34852153	chr18:34852153:A:G	rs1786606	A	G	G	SOX2_HMG_3	1	1	+	8.545698065277596	6.714050475198304	TATCAATGCAATTAATG
chr18	34894114	34894115	chr18:34894115:C:T	rs2422206	C	T	T	SOX2_HMG_3	35	0	+	0	0	.
chr18	34913788	34913789	chr18:34913789:C:T	rs8083966	C	T	C	SOX2_HMG_3	27	0	+	0	0	.
chr18	35107307	35107308	chr18:35107308:G:A	rs9807664	G	A	G	SOX2_HMG_3	21	0	-	0	0	.
chr18	36196163	36196164	chr18:36196164:G:A	rs13381368	G	A	G	SOX2_HMG_3	8	1	+	8.426236913074222	7.5771929657105925	GAGCAATGGCATTGTCA
chr18	36196167	36196168	chr18:36196168:T:G	rs13381980	T	G	T	SOX2_HMG_3	12	1	+	8.426236913074222	1.517482133759001	GAGCAATGGCATTGTCA
chr18	36510950	36510951	chr18:36510951:A:T	rs4799419	A	T	A	SOX2_HMG_3	-17	0	+	0	0	.
chr18	36510996	36510997	chr18:36510997:A:G	rs7242523	A	G	A	SOX2_HMG_3	29	0	+	0	0	.
chr18	36636540	36636541	chr18:36636541:A:G	rs11660710	A	G	A	SOX2_HMG_3	-14	0	-	0	0	.
chr18	36673781	36673782	chr18:36673782:C:T	rs503274	C	T	T	SOX2_HMG_3	18	0	-	0	0	.
chr18	36673802	36673803	chr18:36673803:C:T	rs17680371	C	T	C	SOX2_HMG_3	-3	0	-	0	0	.
chr18	37574332	37574333	chr18:37574333:G:A	rs747423507	G	A	G	SOX2_HMG_3	22	0	-	0	0	.
chr18	37935213	37935214	chr18:37935214:A:C	rs80337214	A	C	A	SOX2_HMG_3	-13	0	+	0	0	.
chr18	38040926	38040927	chr18:38040927:T:G	rs1026937	T	G	G	SOX2_HMG_3	-12	0	+	0	0	.
chr18	38636031	38636032	chr18:38636032:A:G	rs143606258	A	G	A	SOX2_HMG_3	9	1	+	3.510038300463849	-1.07073672868952	GATTAATGGAATTGGGT
chr18	38948506	38948507	chr18:38948507:A:G	rs4239417	A	G	G	SOX2_HMG_3	8	1	-	1.8526015526569586	0.9808652000210956	CATCTATGTTGGTGAAG
chr18	39197127	39197128	chr18:39197128:T:G	rs9959683	T	G	G	SOX2_HMG_3	-1	0	+	0	0	.
chr18	39329962	39329963	chr18:39329963:C:T	rs9955938	C	T	C	SOX2_HMG_3	-18	0	+	0	0	.
chr18	40431937	40431938	chr18:40431938:C:T	rs12327278	C	T	C	SOX2_HMG_3	27	0	-	0	0	.
chr18	40493502	40493503	chr18:40493503:C:T	rs203179	C	T	C	SOX2_HMG_3	-1	0	+	0	0	.
chr18	40877141	40877142	chr18:40877142:C:A	rs79062850	C	A	c	SOX2_HMG_3	10	1	-	2.1893237715495903	2.1893237715495903	CATCAAGGTCGTTGAAA
chr18	41372410	41372411	chr18:41372411:C:T	rs1845925	C	T	C	SOX2_HMG_3	28	0	-	0	0	.
chr18	41406934	41406935	chr18:41406935:T:C	rs6507415	T	C	T	SOX2_HMG_3	5	1	-	9.718351056068617	2.8095962767533944	CATCAATGTCAGTGTGC
chr18	41539346	41539347	chr18:41539347:C:T	rs2587634	C	T	T	SOX2_HMG_3	21	0	-	0	0	.
chr18	41911692	41911693	chr18:41911693:T:C	rs8089834	T	C	T	SOX2_HMG_3	-9	0	+	0	0	.
chr18	42365560	42365561	chr18:42365561:A:T	rs8087788	A	T	A	SOX2_HMG_3	-16	0	+	0	0	.
chr18	42455181	42455182	chr18:42455182:A:C	rs346188	A	C	A	SOX2_HMG_3	27	0	+	0	0	.
chr18	42756615	42756616	chr18:42756616:G:A	rs559216	G	A	G	SOX2_HMG_3	2	1	-	8.209963549586766	13.213335619902352	GCCCAATTTTATTGATT
chr18	43081819	43081820	chr18:43081820:A:C	rs28550022	A	C	A	SOX2_HMG_3	17	0	-	0	0	.
chr18	44309243	44309244	chr18:44309244:A:G	rs7242959	A	G	A	SOX2_HMG_3	21	0	-	0	0	.
chr18	44309247	44309248	chr18:44309248:G:A	rs36096597	G	A	G	SOX2_HMG_3	17	0	-	0	0	.
chr18	44341626	44341627	chr18:44341627:C:A	rs140542218	C	A	c	SOX2_HMG_3	-18	0	+	0	0	.
chr18	44464546	44464547	chr18:44464547:C:T	rs76615419	C	T	C	SOX2_HMG_3	36	0	+	0	0	.
chr18	44520109	44520110	chr18:44520110:A:T	rs10502833	A	T	A	SOX2_HMG_3	15	1	-	2.7862180404997976	1.5513156037830755	GGGCAATAGCCTTGATG
chr18	44802182	44802183	chr18:44802183:G:C	rs1465969	G	C	G	SOX2_HMG_3	-3	0	-	0	0	.
chr18	45548782	45548783	chr18:45548783:C:G	rs2542975	C	G	C	SOX2_HMG_3	-5	0	-	0	0	.
chr18	45553450	45553451	chr18:45553451:A:C	rs118013756	A	C	A	SOX2_HMG_3	24	0	+	0	0	.
chr18	45746082	45746083	chr18:45746083:G:A	rs1295257711	G	A	A	SOX2_HMG_3	-14	0	+	0	0	.
chr18	45983385	45983386	chr18:45983386:G:A	rs920294	G	A	G	SOX2_HMG_3	-4	0	-	0	0	.
chr18	46053626	46053627	chr18:46053627:C:T	rs75388625	C	T	C	SOX2_HMG_3	13	1	-	3.3611056430636763	-3.5476491362515437	ACTCAATTTAGTTGAGG
chr18	46237865	46237866	chr18:46237866:A:G	rs7228365	A	G	G	SOX2_HMG_3	-5	0	+	0	0	.
chr18	46461186	46461187	chr18:46461187:A:G	rs2365332	A	G	G	SOX2_HMG_3	11	1	-	2.2227504012007984	-4.4699410970315485	GCTCAAGGTCATTGGGA
chr18	46576750	46576751	chr18:46576751:G:C	rs521940	G	C	G	SOX2_HMG_3	-19	0	-	0	0	.
chr18	46750878	46750879	chr18:46750879:T:C	rs4624285	T	C	T	SOX2_HMG_3	-8	0	-	0	0	.
chr18	47470563	47470564	chr18:47470564:A:T	chr18:47470564:A:T	A	T	A	SOX2_HMG_3	-2	0	+	0	0	.
chr18	47507114	47507115	chr18:47507115:G:A	rs4939797	G	A	G	SOX2_HMG_3	13	1	+	2.665928599650768	-4.242826179664451	AATCAATAGCAGCGGTG
chr18	48018680	48018681	chr18:48018681:G:T	rs12967850	G	T	G	SOX2_HMG_3	21	0	+	0	0	.
chr18	48213446	48213447	chr18:48213447:T:G	rs4940333	T	G	G	SOX2_HMG_3	-14	0	-	0	0	.
chr18	48338568	48338569	chr18:48338569:C:T	rs111917360	C	T	C	SOX2_HMG_3	1	1	-	2.7268030585988523	4.558450648678144	GGACACTGTCAGTGAAA
chr18	48472147	48472148	chr18:48472148:T:C	rs9956450	T	C	C	SOX2_HMG_3	-9	0	-	0	0	.
chr18	48580258	48580259	chr18:48580259:A:G	rs10438972	A	G	G	SOX2_HMG_3	14	1	+	1.0225524792392036	-3.1593251380619156	GGTCACTGGCACTGAGG
chr18	48738319	48738320	chr18:48738320:T:G	rs4939798	T	G	T	SOX2_HMG_3	14	1	-	4.768424471584508	-2.063874233982185	AAGAAATGACATTGAAA
chr18	48842045	48842046	chr18:48842046:C:A	rs117705917	C	A	A	SOX2_HMG_3	-7	0	+	0	0	.
chr18	48960674	48960675	chr18:48960675:T:C	rs139770888	T	C	T	SOX2_HMG_3	14	1	+	8.187451707414898	4.067926846662498	AAACAATGTAAGTGTTT
chr18	48960680	48960681	chr18:48960681:G:A	rs78574740	G	A	G	SOX2_HMG_3	20	0	+	0	0	.
chr18	49095045	49095046	chr18:49095046:C:T	rs77085463	C	T	C	SOX2_HMG_3	24	0	-	0	0	.
chr18	49189913	49189914	chr18:49189914:G:C	rs55658710	G	C	g	SOX2_HMG_3	-9	0	+	0	0	.
chr18	49412976	49412977	chr18:49412977:G:C	rs12606885	G	C	G	SOX2_HMG_3	-4	0	+	0	0	.
chr18	49492905	49492906	chr18:49492906:T:C	rs3814887	T	C	T	SOX2_HMG_3	7	1	+	5.534269038015394	0.846137331312955	AATCAATTGTATTATAA
chr18	49652945	49652946	chr18:49652946:T:C	rs7505583	T	C	C	SOX2_HMG_3	36	0	+	0	0	.
chr18	49685788	49685789	chr18:49685789:G:A	rs66781087	G	A	g	SOX2_HMG_3	-3	0	+	0	0	.
chr18	49685801	49685802	chr18:49685802:A:G	rs116832726	A	G	A	SOX2_HMG_3	10	1	+	4.421520745994105	-2.4872340333211156	CCTCATTTTTATTGAGA
chr18	49849181	49849182	chr18:49849182:A:C	rs485835	A	C	C	SOX2_HMG_3	12	1	-	5.589584695331888	-1.319170083983332	ACTCCATGCTATTGAGT
chr18	49895389	49895390	chr18:49895390:C:A	rs867263677	C	A	C	SOX2_HMG_3	11	1	-	3.3334419593655817	4.750521928585531	TTTGAATGTCAGTGTTG
chr18	49938472	49938473	chr18:49938473:A:G	rs12457612	A	G	A	SOX2_HMG_3	27	0	-	0	0	.
chr18	50128171	50128172	chr18:50128172:T:C	rs78000200	T	C	T	SOX2_HMG_3	28	0	-	0	0	.
chr18	50188988	50188989	chr18:50188989:G:A	rs12966222	G	A	G	SOX2_HMG_3	-11	0	+	0	0	.
chr18	50561404	50561405	chr18:50561405:G:A	rs2045532	G	A	A	SOX2_HMG_3	23	0	-	0	0	.
chr18	50619677	50619678	chr18:50619678:T:G	rs3867257	T	G	T	SOX2_HMG_3	5	1	-	8.327629964719394	1.418875185404172	CATCAATGACACTGAAA
chr18	50704525	50704526	chr18:50704526:C:T	rs7227230	C	T	T	SOX2_HMG_3	31	0	-	0	0	.
chr18	50853956	50853957	chr18:50853957:G:T	rs114334910	G	T	G	SOX2_HMG_3	-15	0	+	0	0	.
chr18	51051221	51051222	chr18:51051222:T:C	rs76642607	T	C	T	SOX2_HMG_3	-3	0	+	0	0	.
chr18	51051246	51051247	chr18:51051247:G:C	rs544824712	G	C	G	SOX2_HMG_3	22	0	+	0	0	.
chr18	51731239	51731240	chr18:51731240:G:A	rs16953869	G	A	G	SOX2_HMG_3	16	1	+	5.260063364631325	4.986375748241054	AAACAATACAAGTGACG
chr18	51759564	51759565	chr18:51759565:G:A	rs11660810	G	A	G	SOX2_HMG_3	-11	0	-	0	0	.
chr18	52508972	52508973	chr18:52508973:A:G	rs1145259	A	G	G	SOX2_HMG_3	36	0	-	0	0	.
chr18	52764200	52764201	chr18:52764201:G:C	rs1835716	G	C	C	SOX2_HMG_3	-13	0	+	0	0	.
chr18	53679763	53679764	chr18:53679764:A:C	rs11876075	A	C	A	SOX2_HMG_3	-15	0	+	0	0	.
chr18	53847667	53847668	chr18:53847668:C:A	rs7237478	C	A	C	SOX2_HMG_3	27	0	-	0	0	.
chr18	53947246	53947247	chr18:53947247:T:G	rs72922020	T	G	T	SOX2_HMG_3	4	1	-	5.105677442539022	-1.8030773367761965	TTTCAATGGCAGTTATT
chr18	53957639	53957640	chr18:53957640:G:A	rs68015088	G	A	G	SOX2_HMG_3	-13	0	+	0	0	.
chr18	54118669	54118670	chr18:54118670:T:G	rs922074	T	G	T	SOX2_HMG_3	-7	0	-	0	0	.
chr18	54161043	54161044	chr18:54161044:A:G	rs1145310	A	G	A	SOX2_HMG_3	-17	0	+	0	0	.
chr18	54233467	54233468	chr18:54233468:G:A	rs114730458	G	A	G	SOX2_HMG_3	-4	0	-	0	0	.
chr18	55033731	55033732	chr18:55033732:G:A	rs11152150	G	A	A	SOX2_HMG_3	30	0	+	0	0	.
chr18	55405303	55405304	chr18:55405304:G:A	rs2958165	G	A	G	SOX2_HMG_3	0	1	-	8.137683426742173	8.000354448693509	CATCAAAGTAAGTGATG
chr18	55838798	55838799	chr18:55838799:G:A	rs11151372	G	A	G	SOX2_HMG_3	15	1	-	2.4440823377924117	5.28679149396927	GAGCCATGCAATTGACA
chr18	56026717	56026718	chr18:56026718:C:A	rs1364417	C	A	C	SOX2_HMG_3	-2	0	-	0	0	.
chr18	56447669	56447670	chr18:56447670:T:A	rs167309	T	A	T	SOX2_HMG_3	5	1	-	7.9235857727340395	1.0148309934188193	AGTCAATGTGAGTGAAG
chr18	57277257	57277258	chr18:57277258:T:C	rs143848289	T	C	T	SOX2_HMG_3	-10	0	-	0	0	.
chr18	57432174	57432175	chr18:57432175:C:T	rs79138467	C	T	C	SOX2_HMG_3	27	0	+	0	0	.
chr18	57543720	57543721	chr18:57543721:C:G	rs571718	C	G	G	SOX2_HMG_3	-8	0	+	0	0	.
chr18	57706360	57706361	chr18:57706361:A:G	rs73443026	A	G	A	SOX2_HMG_3	-14	0	-	0	0	.
chr18	57715852	57715853	chr18:57715853:G:A	rs77865564	G	A	G	SOX2_HMG_3	-6	0	+	0	0	.
chr18	57962407	57962408	chr18:57962408:A:G	rs12454166	A	G	A	SOX2_HMG_3	-3	0	-	0	0	.
chr18	57984938	57984939	chr18:57984939:A:C	rs7236724	A	C	t	SOX2_HMG_3	9	1	-	2.829777164181577	-3.6095732069185202	CATGAATGCTTTTGATT
chr18	57984939	57984940	chr18:57984940:G:A	rs7235042	G	A	G	SOX2_HMG_3	8	1	-	2.829777164181577	3.7015135168174402	CATGAATGCTTTTGATT
chr18	58218272	58218273	chr18:58218273:T:G	rs17064483	T	G	T	SOX2_HMG_3	-7	0	+	0	0	.
chr18	58229593	58229594	chr18:58229594:C:T	rs292447	C	T	T	SOX2_HMG_3	-18	0	+	0	0	.
chr18	58293317	58293318	chr18:58293318:C:T	rs9956458	C	T	T	SOX2_HMG_3	-10	0	+	0	0	.
chr18	58293344	58293345	chr18:58293345:G:T	rs9955824	G	T	T	SOX2_HMG_3	17	0	+	0	0	.
chr18	58615725	58615726	chr18:58615726:C:T	rs76392387	C	T	C	SOX2_HMG_3	-16	0	+	0	0	.
chr18	58639012	58639013	chr18:58639013:A:C	rs74827833	A	C	A	SOX2_HMG_3	-1	0	-	0	0	.
chr18	58645600	58645601	chr18:58645601:G:C	rs12455146	G	C	G	SOX2_HMG_3	-19	0	-	0	0	.
chr18	58930286	58930287	chr18:58930287:T:C	rs11664500	T	C	T	SOX2_HMG_3	-13	0	+	0	0	.
chr18	59216045	59216046	chr18:59216046:G:C	rs11152135	G	C	C	SOX2_HMG_3	30	0	+	0	0	.
chr18	59402532	59402533	chr18:59402533:G:T	rs911061995	G	T	G	SOX2_HMG_3	9	1	-	6.264090042142948	5.212184834133266	CAGCAATGGCAGTGTCA
chr18	59469307	59469308	chr18:59469308:T:C	rs895010	T	C	T	SOX2_HMG_3	-17	0	+	0	0	.
chr18	59478641	59478642	chr18:59478642:T:C	rs610174	T	C	T	SOX2_HMG_3	5	1	-	6.047905537793499	-0.8608492415217219	TTTCAATATTAGTGGTT
chr18	59521129	59521130	chr18:59521130:A:G	rs59848743	A	G	A	SOX2_HMG_3	-12	0	-	0	0	.
chr18	59549787	59549788	chr18:59549788:A:G	rs763466400	A	G	A	SOX2_HMG_3	21	0	-	0	0	.
chr18	59663201	59663202	chr18:59663202:G:A	rs76302303	G	A	G	SOX2_HMG_3	-14	0	+	0	0	.
chr18	59703473	59703474	chr18:59703474:A:G	rs79527989	A	G	A	SOX2_HMG_3	1	1	+	6.157502794763202	4.325855204683911	GATCAATTCTAGAGAGG
chr18	59719367	59719368	chr18:59719368:G:A	rs870470	G	A	G	SOX2_HMG_3	10	1	+	1.4606313868451224	8.369386166160343	GAGCAATGGTGATGATG
chr18	60560848	60560849	chr18:60560849:A:C	rs12962133	A	C	A	SOX2_HMG_3	4	1	+	6.73562399762798	-0.17313078168724055	AACCAATTTTAGTGACT
chr18	60624245	60624246	chr18:60624246:T:C	rs9947661	T	C	C	SOX2_HMG_3	9	1	+	7.285709535039908	6.479039401102862	ACTCAGTGGTATTGAAA
chr18	60981871	60981872	chr18:60981872:C:T	rs143780432	C	T	C	SOX2_HMG_3	-10	0	-	0	0	.
chr18	61574524	61574525	chr18:61574525:T:C	rs73963362	T	C	T	SOX2_HMG_3	35	0	+	0	0	.
chr18	62074209	62074210	chr18:62074210:T:G	rs62095277	T	G	G	SOX2_HMG_3	-4	0	+	0	0	.
chr18	62209261	62209262	chr18:62209262:A:G	rs1587999	A	G	A	SOX2_HMG_3	33	0	-	0	0	.
chr18	62287971	62287972	chr18:62287972:G:A	rs77036427	G	A	G	SOX2_HMG_3	-9	0	+	0	0	.
chr18	62287987	62287988	chr18:62287988:G:A	rs79637446	G	A	G	SOX2_HMG_3	7	1	+	4.4572283484308395	1.728441227869504	GGTCCATGTCAGTGACT
chr18	62332446	62332447	chr18:62332447:A:G	rs4547437	A	G	G	SOX2_HMG_3	4	1	+	5.2282329080238705	-1.6805218712913512	AATCAATTCCATTTTTA
chr18	62378970	62378971	chr18:62378971:C:T	rs12954567	C	T	C	SOX2_HMG_3	7	1	-	13.13527352020511	10.406486399643775	CATCAATGTCATTGTGG
chr18	62452261	62452262	chr18:62452262:A:G	rs73465653	A	G	A	SOX2_HMG_3	29	0	+	0	0	.
chr18	62780925	62780926	chr18:62780926:T:A	rs12961401	T	A	T	SOX2_HMG_3	6	1	+	6.39276656045112	-0.5159882188640998	TTTCAATGCCAGTGGAA
chr18	62792122	62792123	chr18:62792123:T:G	rs188541169	T	G	T	SOX2_HMG_3	0	1	+	3.361769554016607	4.244165433776594	TATCATTTTCAGTGACT
chr18	63074980	63074981	chr18:63074981:G:A	rs76715611	G	A	G	SOX2_HMG_3	-7	0	-	0	0	.
chr18	63149751	63149752	chr18:63149752:T:C	rs75891659	T	C	T	SOX2_HMG_3	5	1	-	5.027146622672426	-1.8816081566427951	AATCAATATTATTAGTG
chr18	63287343	63287344	chr18:63287344:A:T	rs2551397	A	T	A	SOX2_HMG_3	-12	0	+	0	0	.
chr18	63763994	63763995	chr18:63763995:T:C	rs1506413	T	C	T	SOX2_HMG_3	10	1	-	5.569365130129258	-1.3393896491859634	ATACAATTGTATTGTAA
chr18	63924655	63924656	chr18:63924656:C:T	rs62097493	C	T	C	SOX2_HMG_3	-15	0	-	0	0	.
chr18	64404452	64404453	chr18:64404453:T:C	rs55993352	T	C	T	SOX2_HMG_3	25	0	-	0	0	.
chr18	64474815	64474816	chr18:64474816:A:T	rs12966295	A	T	A	SOX2_HMG_3	1	1	+	4.0291895638540725	1.0231457113307552	CATCAATGCAGTTGTGA
chr18	64726234	64726235	chr18:64726235:C:G	rs12954677	C	G	G	SOX2_HMG_3	25	0	-	0	0	.
chr18	64732178	64732179	chr18:64732179:T:C	rs1506226	T	C	C	SOX2_HMG_3	27	0	-	0	0	.
chr18	65280078	65280079	chr18:65280079:A:G	rs682165	A	G	A	SOX2_HMG_3	6	1	-	4.876206291096611	-2.032548488218609	GAACAATGGCCTTGAGT
chr18	65280094	65280095	chr18:65280095:A:G	rs577092165	A	G	A	SOX2_HMG_3	-10	0	-	0	0	.
chr18	65500615	65500616	chr18:65500616:G:T	rs1444068	G	T	T	SOX2_HMG_3	11	1	+	1.9797909873941384	3.3968709566140873	CAGCAAAGCCAGTGAGT
chr18	65631898	65631899	chr18:65631899:A:G	rs116685555	A	G	A	SOX2_HMG_3	22	0	+	0	0	.
chr18	65788354	65788355	chr18:65788355:G:A	rs12457175	G	A	G	SOX2_HMG_3	3	1	-	3.2772632953402776	-3.631491483974941	CAACTATTTCAGTGATG
chr18	66254398	66254399	chr18:66254399:C:T	rs11664666	C	T	T	SOX2_HMG_3	-6	0	+	0	0	.
chr18	66604142	66604143	chr18:66604143:C:G	rs768007226	C	G	C	SOX2_HMG_3	-6	0	+	0	0	.
chr18	67770302	67770303	chr18:67770303:C:T	rs73464526	C	T	C	SOX2_HMG_3	-1	0	-	0	0	.
chr18	67788646	67788647	chr18:67788647:T:A	rs10401084	T	A	A	SOX2_HMG_3	11	1	+	4.8958784600457275	-1.7968130381866194	CATCAATGGTGTTGTGC
chr18	67788669	67788670	chr18:67788670:A:T	rs115211153	A	T	A	SOX2_HMG_3	34	0	+	0	0	.
chr18	67825157	67825158	chr18:67825158:T:C	rs12456077	T	C	T	SOX2_HMG_3	-20	0	+	0	0	.
chr18	67854443	67854444	chr18:67854444:T:G	rs514705	T	G	G	SOX2_HMG_3	14	1	-	4.838495324050019	-1.9938033815166738	GATGAATGGTATTTATA
chr18	68035995	68035996	chr18:68035996:T:C	rs8087130	T	C	T	SOX2_HMG_3	-10	0	+	0	0	.
chr18	68036002	68036003	chr18:68036003:T:G	rs1518022	T	G	T	SOX2_HMG_3	-3	0	+	0	0	.
chr18	68149107	68149108	chr18:68149108:C:A	rs1589134	C	A	c	SOX2_HMG_3	12	1	-	3.4886819686146784	10.3974367479299	ATTCAATGCAATGGTTG
chr18	68234605	68234606	chr18:68234606:T:G	rs58981676	T	G	T	SOX2_HMG_3	-9	0	-	0	0	.
chr18	68377067	68377068	chr18:68377068:T:C	rs17079006	T	C	T	SOX2_HMG_3	-6	0	+	0	0	.
chr18	68699213	68699214	chr18:68699214:G:T	rs185116378	G	T	G	SOX2_HMG_3	7	1	+	5.656112196844887	3.6114016921113508	ACTAAATGTAAGTGATG
chr18	68954810	68954811	chr18:68954811:C:A	rs4450506	C	A	A	SOX2_HMG_3	31	0	-	0	0	.
chr18	69250348	69250349	chr18:69250349:C:T	rs138042748	C	T	C	SOX2_HMG_3	1	1	+	3.55556262022653	3.55556262022653	ACGCAATGTTATCGAAA
chr18	69484701	69484702	chr18:69484702:C:T	rs7238166	C	T	C	SOX2_HMG_3	-4	0	-	0	0	.
chr18	69485406	69485407	chr18:69485407:G:A	rs17081040	G	A	A	SOX2_HMG_3	32	0	-	0	0	.
chr18	69485426	69485427	chr18:69485427:A:G	rs2364204	A	G	G	SOX2_HMG_3	12	1	-	4.560142449204639	-2.3486123301105812	AGGCAATGCCTTTGATG
chr18	69817258	69817259	chr18:69817259:T:C	rs1023744	T	C	T	SOX2_HMG_3	-11	0	-	0	0	.
chr18	69890039	69890040	chr18:69890040:G:T	rs17802023	G	T	G	SOX2_HMG_3	3	1	-	6.100362722725161	-0.8083920565900591	GATCAACTACAGTGATT
chr18	70223504	70223505	chr18:70223505:G:C	rs77857893	G	C	G	SOX2_HMG_3	0	1	-	3.3896914429683886	4.13475834467971	CCTAAATACTAGTGATG
chr18	70249740	70249741	chr18:70249741:G:A	rs4891833	G	A	a	SOX2_HMG_3	3	1	-	3.395839779600689	-3.5129149997145297	AGACAATGTTATTAACG
chr18	70256730	70256731	chr18:70256731:C:G	rs12454981	C	G	C	SOX2_HMG_3	-3	0	-	0	0	.
chr18	70256933	70256934	chr18:70256934:C:G	rs2886594	C	G	G	SOX2_HMG_3	-19	0	-	0	0	.
chr18	70659013	70659014	chr18:70659014:T:C	rs1510040	T	C	T	SOX2_HMG_3	2	1	+	8.766346373556843	3.762974303241255	CATCAATGTGATTGACA
chr18	70672813	70672814	chr18:70672814:C:T	rs556807958	C	T	C	SOX2_HMG_3	-12	0	-	0	0	.
chr18	71045481	71045482	chr18:71045482:A:G	rs12970821	A	G	A	SOX2_HMG_3	30	0	+	0	0	.
chr18	71524247	71524248	chr18:71524248:A:G	rs959721399	A	G	A	SOX2_HMG_3	19	0	-	0	0	.
chr18	71730992	71730993	chr18:71730993:T:C	rs8095170	T	C	T	SOX2_HMG_3	9	1	+	5.814376790990157	5.007706657053111	TATCATTTTTAGTGATC
chr18	72100555	72100556	chr18:72100556:C:T	rs545727409	C	T	c	SOX2_HMG_3	-2	0	-	0	0	.
chr18	72351787	72351788	chr18:72351788:G:T	rs12961877	G	T	G	SOX2_HMG_3	-19	0	+	0	0	.
chr18	73283876	73283877	chr18:73283877:A:C	rs79675858	A	C	A	SOX2_HMG_3	-2	0	+	0	0	.
chr18	73283878	73283879	chr18:73283879:T:C	rs4619489	T	C	C	SOX2_HMG_3	0	1	+	4.637070052420945	4.77439903046961	TAGCAATTTTATTGCTT
chr18	74249317	74249318	chr18:74249318:A:G	rs180976128	A	G	A	SOX2_HMG_3	5	1	+	6.694486714416571	-0.2142680648986499	CATCAAAGACAGTGAAA
chr18	74292900	74292901	chr18:74292901:T:G	rs3813106	T	G	T	SOX2_HMG_3	-4	0	+	0	0	.
chr18	74511174	74511175	chr18:74511175:C:T	rs8088885	C	T	.	SOX2_HMG_3	31	0	-	0	0	.
chr18	74551902	74551903	chr18:74551903:G:A	rs55813520	G	A	G	SOX2_HMG_3	13	1	+	2.7338064021456865	-4.174948377169534	GATCAATTGGATCGATT
chr18	75049369	75049370	chr18:75049370:C:A	rs74486978	C	A	C	SOX2_HMG_3	-6	0	-	0	0	.
chr18	75055312	75055313	chr18:75055313:G:T	rs17056226	G	T	G	SOX2_HMG_3	-12	0	-	0	0	.
chr18	75067690	75067691	chr18:75067691:T:C	rs4491625	T	C	T	SOX2_HMG_3	1	1	-	3.4980116828206866	1.6663640927413963	TATAAATGGCAGTGGAG
chr18	75113488	75113489	chr18:75113489:A:G	rs55788925	A	G	G	SOX2_HMG_3	-20	0	+	0	0	.
chr18	75128636	75128637	chr18:75128637:A:G	rs17264285	A	G	A	SOX2_HMG_3	-5	0	+	0	0	.
chr18	75338787	75338788	chr18:75338788:C:T	rs77895107	C	T	C	SOX2_HMG_3	18	0	-	0	0	.
chr18	75475550	75475551	chr18:75475551:T:C	rs114311206	T	C	T	SOX2_HMG_3	8	1	+	5.755312479448865	4.883576126813001	CTTCAAAGTTAGTGAAG
chr18	75539048	75539049	chr18:75539049:G:C	rs62089545	G	C	G	SOX2_HMG_3	-16	0	+	0	0	.
chr18	75679347	75679348	chr18:75679348:C:T	rs2584469	C	T	T	SOX2_HMG_3	-2	0	-	0	0	.
chr18	75784590	75784591	chr18:75784591:C:T	rs17058124	C	T	C	SOX2_HMG_3	23	0	+	0	0	.
chr18	75881564	75881565	chr18:75881565:A:G	rs8087536	A	G	A	SOX2_HMG_3	-20	0	+	0	0	.
chr18	76388564	76388565	chr18:76388565:T:C	rs73974502	T	C	T	SOX2_HMG_3	5	1	-	2.862071897729774	-4.046682881585445	CATCAATGTACATGATG
chr18	76541022	76541023	chr18:76541023:C:T	rs77044162	C	T	C	SOX2_HMG_3	17	0	+	0	0	.
chr18	76565050	76565051	chr18:76565051:C:T	rs114389974	C	T	C	SOX2_HMG_3	7	1	-	4.952242037672674	2.2234549171113396	CTTCAAGGTTAGTGAAT
chr18	76614193	76614194	chr18:76614194:A:G	rs72970103	A	G	a	SOX2_HMG_3	7	1	+	4.0365259495994525	6.765313070160788	CATAAATAGAAGTGAAG
chr18	76668685	76668686	chr18:76668686:A:G	rs4891184	A	G	G	SOX2_HMG_3	-5	0	+	0	0	.
chr18	76867162	76867163	chr18:76867163:A:G	rs2658747	A	G	G	SOX2_HMG_3	-9	0	+	0	0	.
chr18	76875501	76875502	chr18:76875502:G:A	rs2276210	G	A	G	SOX2_HMG_3	0	1	+	3.5151305147857985	3.294536235700505	GTTCAAATGTAGTGAAT
chr18	77003090	77003091	chr18:77003091:T:A	rs193254946	T	A	T	SOX2_HMG_3	12	1	+	4.894648623211005	-2.0141061561042153	AATAAATGCCAGTGTAG
chr18	77059082	77059083	chr18:77059083:C:T	rs56014377	C	T	T	SOX2_HMG_3	15	1	-	4.889444824631017	5.321918406181918	AGTCAAAGTAAGTGAGA
chr18	77141970	77141971	chr18:77141971:T:G	rs1667957	T	G	T	SOX2_HMG_3	-1	0	-	0	0	.
chr18	77168271	77168272	chr18:77168272:T:C	rs1789138	T	C	C	SOX2_HMG_3	25	0	-	0	0	.
chr18	77210324	77210325	chr18:77210325:T:C	rs2717106	T	C	C	SOX2_HMG_3	-18	0	-	0	0	.
chr18	77324137	77324138	chr18:77324138:C:T	rs75220814	C	T	C	SOX2_HMG_3	-1	0	+	0	0	.
chr18	77360513	77360514	chr18:77360514:T:C	rs2717124	T	C	C	SOX2_HMG_3	-20	0	+	0	0	.
chr18	77702808	77702809	chr18:77702809:C:G	rs1509795	C	G	C	SOX2_HMG_3	27	0	-	0	0	.
chr18	77709105	77709106	chr18:77709106:C:T	rs1393717	C	T	C	SOX2_HMG_3	-5	0	-	0	0	.
chr18	78154486	78154487	chr18:78154487:G:C	rs6506766	G	C	C	SOX2_HMG_3	19	0	-	0	0	.
chr18	78242725	78242726	chr18:78242726:A:G	rs117208583	A	G	A	SOX2_HMG_3	-3	0	-	0	0	.
chr18	78450025	78450026	chr18:78450026:C:G	rs62094109	C	G	G	SOX2_HMG_3	-8	0	-	0	0	.
chr18	78454440	78454441	chr18:78454441:C:T	rs73493781	C	T	C	SOX2_HMG_3	36	0	-	0	0	.
chr18	78474973	78474974	chr18:78474974:C:T	rs149239585	C	T	-	SOX2_HMG_3	19	0	+	0	0	.
chr18	78521337	78521338	chr18:78521338:C:T	rs11081619	C	T	C	SOX2_HMG_3	-9	0	+	0	0	.
chr18	78546457	78546458	chr18:78546458:G:T	rs1866330	G	T	G	SOX2_HMG_3	23	0	-	0	0	.
chr18	78561267	78561268	chr18:78561268:T:C	rs9959373	T	C	T	SOX2_HMG_3	-5	0	+	0	0	.
chr18	78603656	78603657	chr18:78603657:A:G	rs75897938	A	G	A	SOX2_HMG_3	-15	0	+	0	0	.
chr18	78737971	78737972	chr18:78737972:T:C	rs12963574	T	C	C	SOX2_HMG_3	10	1	-	3.0692627725377792	-3.839492006777441	TGTCAATTCCAGTTAAG
chr18	78799486	78799487	chr18:78799487:C:A	rs4799202	C	A	C	SOX2_HMG_3	-4	0	+	0	0	.
chr18	79170280	79170281	chr18:79170281:A:G	rs530471572	A	G	A	SOX2_HMG_3	-2	0	-	0	0	.
chr18	79387639	79387640	chr18:79387640:G:A	rs9807411	G	A	G	SOX2_HMG_3	29	0	-	0	0	.
chr18	79387641	79387642	chr18:79387642:G:C	rs304920	G	C	C	SOX2_HMG_3	27	0	-	0	0	.
chr18	79387660	79387661	chr18:79387661:G:C	rs304921	G	C	G	SOX2_HMG_3	8	1	-	2.7652169728340805	3.499485405605281	GAACAATGCTGTTGTGA
chr18	79388536	79388537	chr18:79388537:G:A	rs62097703	G	A	G	SOX2_HMG_3	-17	0	+	0	0	.
chr18	79601575	79601576	chr18:79601576:C:T	rs72999788	C	T	C	SOX2_HMG_3	-6	0	-	0	0	.
chr18	79647874	79647875	chr18:79647875:A:C	rs11081552	A	C	A	SOX2_HMG_3	-11	0	+	0	0	.
chr18	79784979	79784980	chr18:79784980:T:C	rs113409982	T	C	T	SOX2_HMG_3	30	0	+	0	0	.
chr18	79919502	79919503	chr18:79919503:G:A	rs12607405	G	A	A	SOX2_HMG_3	14	1	+	2.2537543108151454	6.4356319281162655	GGTCAAGGTCAGTGGGG
chr18	79919518	79919519	chr18:79919519:G:A	rs12607407	G	A	G	SOX2_HMG_3	30	0	+	0	0	.
chr18	79921900	79921901	chr18:79921901:A:G	rs11665374	A	G	G	SOX2_HMG_3	5	1	+	4.986611173816758	-1.9221436054984624	GGTCAAGGTCAGTGACA
chr18	80150024	80150025	chr18:80150025:T:C	rs7407145	T	C	C	SOX2_HMG_3	-10	0	+	0	0	.
chr18	80202462	80202463	chr18:80202463:T:A	rs145152412	T	A	t	SOX2_HMG_3	-10	0	+	0	0	.
chr19	317701	317702	chr19:317702:C:G	rs57568301	C	G	C	SOX2_HMG_3	-3	0	+	0	0	.
chr19	605227	605228	chr19:605228:C:T	rs80135478	C	T	C	SOX2_HMG_3	21	0	+	0	0	.
chr19	605232	605233	chr19:605233:C:T	rs116723556	C	T	C	SOX2_HMG_3	26	0	+	0	0	.
chr19	619020	619021	chr19:619021:G:C	rs14155	G	C	C	SOX2_HMG_3	-18	0	-	0	0	.
chr19	743538	743539	chr19:743539:C:T	rs190170791	C	T	c	SOX2_HMG_3	35	0	+	0	0	.
chr19	782117	782118	chr19:782118:C:A	rs117944849	C	A	C	SOX2_HMG_3	6	1	+	0.17438936744401645	0.17438936744401645	TGTCAGCGGCAGTGATG
chr19	906702	906703	chr19:906703:G:C	rs59481135	G	C	-	SOX2_HMG_3	-10	0	-	0	0	.
chr19	1080311	1080312	chr19:1080312:G:C	rs2074454	G	C	C	SOX2_HMG_3	27	0	+	0	0	.
chr19	1577117	1577118	chr19:1577118:C:T	rs9585	C	T	C	SOX2_HMG_3	20	0	+	0	0	.
chr19	1686880	1686881	chr19:1686881:G:A	rs10425877	G	A	g	SOX2_HMG_3	21	0	+	0	0	.
chr19	1773353	1773354	chr19:1773354:A:G	rs8108510	A	G	G	SOX2_HMG_3	-2	0	-	0	0	.
chr19	2256512	2256513	chr19:2256513:C:T	rs114538290	C	T	C	SOX2_HMG_3	32	0	-	0	0	.
chr19	2303220	2303221	chr19:2303221:T:C	rs8103800	T	C	C	SOX2_HMG_3	17	0	+	0	0	.
chr19	2380819	2380820	chr19:2380820:G:C	rs4807247	G	C	C	SOX2_HMG_3	22	0	-	0	0	.
chr19	2549916	2549917	chr19:2549917:T:C	rs75484337	T	C	T	SOX2_HMG_3	0	1	-	3.093925408136416	3.3145196872217104	ACTCCATTTCATTGTTA
chr19	2569947	2569948	chr19:2569948:T:G	rs10416033	T	G	G	SOX2_HMG_3	6	1	+	9.859398708533227	2.9506439292180078	GAGCAATGTCAGTGACA
chr19	2703031	2703032	chr19:2703032:A:G	rs113391116	A	G	A	SOX2_HMG_3	5	1	+	4.067198206868595	-2.841556572446626	GAAGAATGTCAGTGATC
chr19	2950833	2950834	chr19:2950834:G:T	rs78161636	G	T	G	SOX2_HMG_3	32	0	+	0	0	.
chr19	3047561	3047562	chr19:3047562:C:T	rs55919790	C	T	T	SOX2_HMG_3	21	0	+	0	0	.
chr19	3060291	3060292	chr19:3060292:C:T	rs114392649	C	T	-	SOX2_HMG_3	35	0	+	0	0	.
chr19	3125332	3125333	chr19:3125333:T:C	rs77849071	T	C	T	SOX2_HMG_3	31	0	-	0	0	.
chr19	3266173	3266174	chr19:3266174:G:A	rs78754690	G	A	G	SOX2_HMG_3	-14	0	+	0	0	.
chr19	3701700	3701701	chr19:3701701:T:C	rs28668474	T	C	T	SOX2_HMG_3	-20	0	-	0	0	.
chr19	3983185	3983186	chr19:3983186:A:G	rs2230560	A	G	G	SOX2_HMG_3	-11	0	+	0	0	.
chr19	4114311	4114312	chr19:4114312:T:C	rs350895	T	C	C	SOX2_HMG_3	1	1	+	5.382650928788301	5.382650928788301	GTTCAATTTTAATGAGA
chr19	4145010	4145011	chr19:4145011:G:A	rs693975	G	A	a	SOX2_HMG_3	-1	0	-	0	0	.
chr19	4212347	4212348	chr19:4212348:T:G	rs10417017	T	G	G	SOX2_HMG_3	30	0	+	0	0	.
chr19	4369306	4369307	chr19:4369307:G:A	rs376637355	G	A	G	SOX2_HMG_3	-18	0	-	0	0	.
chr19	4695371	4695372	chr19:4695372:G:T	rs57034092	G	T	G	SOX2_HMG_3	12	1	-	3.033496692884752	3.033496692884752	GATCAATGTAAGCGGGG
chr19	4795634	4795635	chr19:4795635:G:C	rs8111933	G	C	C	SOX2_HMG_3	16	1	+	4.9801480993527605	2.980305604436217	AGTCCATGGCATTGGTG
chr19	4833273	4833274	chr19:4833274:C:T	rs77428119	C	T	T	SOX2_HMG_3	36	0	+	0	0	.
chr19	5075860	5075861	chr19:5075861:A:T	rs114518502	A	T	A	SOX2_HMG_3	-12	0	+	0	0	.
chr19	5345139	5345140	chr19:5345140:A:T	rs115947146	A	T	A	SOX2_HMG_3	17	0	-	0	0	.
chr19	5417822	5417823	chr19:5417823:A:T	rs424836	A	T	T	SOX2_HMG_3	-1	0	+	0	0	.
chr19	5720371	5720372	chr19:5720372:A:C	rs72979079	A	C	A	SOX2_HMG_3	-19	0	+	0	0	.
chr19	5720372	5720373	chr19:5720373:G:A	rs189210845	G	A	G	SOX2_HMG_3	-18	0	+	0	0	.
chr19	5720376	5720377	chr19:5720377:C:A	rs144543071	C	A	C	SOX2_HMG_3	-14	0	+	0	0	.
chr19	5720392	5720393	chr19:5720393:A:G	rs180683901	A	G	A	SOX2_HMG_3	2	1	+	3.8028747919579327	3.8028747919579327	AAACACTGGTAGTGTTG
chr19	5880937	5880938	chr19:5880938:C:T	rs1674153	C	T	c	SOX2_HMG_3	19	0	+	0	0	.
chr19	5938183	5938184	chr19:5938184:A:G	chr19:5938184:A:G	A	G	A	SOX2_HMG_3	-3	0	+	0	0	.
chr19	6077108	6077109	chr19:6077109:A:G	rs146449661	A	G	T	SOX2_HMG_3	17	0	-	0	0	.
chr19	6161469	6161470	chr19:6161470:G:A	rs377754895	G	A	G	SOX2_HMG_3	33	0	+	0	0	.
chr19	6532941	6532942	chr19:6532942:T:G	rs76771492	T	G	T	SOX2_HMG_3	-17	0	-	0	0	.
chr19	6633608	6633609	chr19:6633609:T:C	rs669631	T	C	t	SOX2_HMG_3	31	0	+	0	0	.
chr19	6645429	6645430	chr19:6645430:A:C	rs425796	A	C	N	SOX2_HMG_3	12	1	-	2.12751181606675	-4.78124296324847	TGTAAATGCCAGTGTAA
chr19	6812794	6812795	chr19:6812795:A:G	rs2135788	A	G	G	SOX2_HMG_3	34	0	+	0	0	.
chr19	7054962	7054963	chr19:7054963:A:G	rs920715532	A	G	-	SOX2_HMG_3	30	0	+	0	0	.
chr19	7099798	7099799	chr19:7099799:A:G	rs73923711	A	G	A	SOX2_HMG_3	5	1	+	4.057698634930364	-2.851056144384856	AATTAATAACAGTGAGA
chr19	7189084	7189085	chr19:7189085:C:T	rs8103934	C	T	C	SOX2_HMG_3	-13	0	-	0	0	.
chr19	7360926	7360927	chr19:7360927:G:A	rs76506685	G	A	G	SOX2_HMG_3	20	0	-	0	0	.
chr19	7398851	7398852	chr19:7398852:G:A	rs144178389	G	A	G	SOX2_HMG_3	29	0	-	0	0	.
chr19	7436863	7436864	chr19:7436864:A:C	rs11667083	A	C	A	SOX2_HMG_3	20	0	-	0	0	.
chr19	7678934	7678935	chr19:7678935:A:G	rs72996468	A	G	A	SOX2_HMG_3	6	1	-	2.535607390465675	-4.373147388849546	TGTCAATGTTTTTTATG
chr19	7718715	7718716	chr19:7718716:G:A	rs59702858	G	A	g	SOX2_HMG_3	21	0	+	0	0	.
chr19	7738280	7738281	chr19:7738281:A:G	rs7254342	A	G	a	SOX2_HMG_3	5	1	+	3.6951029712203414	-3.213651808094879	GATGAATGGTGGTGATG
chr19	7738290	7738291	chr19:7738291:T:C	rs7258175	T	C	t	SOX2_HMG_3	15	1	+	3.6951029712203414	0.8523938150434829	GATGAATGGTGGTGATG
chr19	7795877	7795878	chr19:7795878:T:C	rs10401786	T	C	c	SOX2_HMG_3	21	0	-	0	0	.
chr19	7829754	7829755	chr19:7829755:C:G	rs151063055	C	G	C	SOX2_HMG_3	-1	0	-	0	0	.
chr19	7829761	7829762	chr19:7829762:T:C	rs530922550	T	C	T	SOX2_HMG_3	-8	0	-	0	0	.
chr19	8194652	8194653	chr19:8194653:C:T	rs760056806	C	T	C	SOX2_HMG_3	29	0	-	0	0	.
chr19	8194653	8194654	chr19:8194654:G:A	rs191388672	G	A	G	SOX2_HMG_3	28	0	-	0	0	.
chr19	8194681	8194682	chr19:8194682:A:G	rs78163053	A	G	A	SOX2_HMG_3	0	1	-	0.4761288591203473	0.6134578371690119	TATCCGTGTCAGTGAGG
chr19	8487754	8487755	chr19:8487755:T:C	rs7248918	T	C	T	SOX2_HMG_3	5	1	-	4.482585961039204	-2.4261688182760164	CAGCAATGGTGGTGAAA
chr19	8488515	8488516	chr19:8488516:G:A	rs1599870	G	A	G	SOX2_HMG_3	-13	0	+	0	0	.
chr19	8513503	8513504	chr19:8513504:A:G	rs2967580	A	G	G	SOX2_HMG_3	12	1	-	1.6607121924750419	-5.248042586840178	GTTCAAGACCAGTGAGG
chr19	8513515	8513516	chr19:8513516:C:A	rs112788230	C	A	C	SOX2_HMG_3	0	1	-	1.6607121924750419	0.7783163127150551	GTTCAAGACCAGTGAGG
chr19	8525729	8525730	chr19:8525730:C:T	rs145378255	C	T	C	SOX2_HMG_3	34	0	-	0	0	.
chr19	8677304	8677305	chr19:8677305:C:A	rs4804078	C	A	C	SOX2_HMG_3	10	1	-	4.860539294143873	4.860539294143873	TGTCAATTCTGTTGAGG
chr19	8811613	8811614	chr19:8811614:A:G	rs781927784	A	G	A	SOX2_HMG_3	-17	0	+	0	0	.
chr19	8938472	8938473	chr19:8938473:G:A	rs12461007	G	A	G	SOX2_HMG_3	-7	0	+	0	0	.
chr19	9026508	9026509	chr19:9026509:G:T	rs12462970	G	T	t	SOX2_HMG_3	26	0	+	0	0	.
chr19	9026518	9026519	chr19:9026519:T:G	rs73012738	T	G	T	SOX2_HMG_3	36	0	+	0	0	.
chr19	9075027	9075028	chr19:9075028:G:A	rs10420883	G	A	A	SOX2_HMG_3	11	1	-	1.4435306456956436	8.136222143927991	CATCAGTGTCACTGAGT
chr19	9076076	9076077	chr19:9076077:G:A	rs74652972	G	A	G	SOX2_HMG_3	1	1	+	1.0567852472040045	2.8884328372832955	GGTGAAGGGCAGTGATG
chr19	9190489	9190490	chr19:9190490:T:G	rs13345998	T	G	.	SOX2_HMG_3	17	0	+	0	0	.
chr19	9321230	9321231	chr19:9321231:T:C	rs2082426	T	C	C	SOX2_HMG_3	25	0	+	0	0	.
chr19	9819937	9819938	chr19:9819938:T:C	chr19:9819938:T:C	T	C	T	SOX2_HMG_3	15	1	-	12.414007307673446	11.981533726122546	TATCAATGAAAGTGAAA
chr19	9987254	9987255	chr19:9987255:A:C	rs8101390	A	C	A	SOX2_HMG_3	7	1	-	5.3944448115324395	7.439155316265975	GCGCAATTTCATTGTAG
chr19	10031626	10031627	chr19:10031627:G:T	rs62106163	G	T	G	SOX2_HMG_3	23	0	-	0	0	.
chr19	10145109	10145110	chr19:10145110:G:A	rs10412529	G	A	G	SOX2_HMG_3	-13	0	+	0	0	.
chr19	10197990	10197991	chr19:10197991:C:G	rs150293645	C	G	C	SOX2_HMG_3	-8	0	-	0	0	.
chr19	10378249	10378250	chr19:10378250:C:T	rs55762744	C	T	C	SOX2_HMG_3	28	0	-	0	0	.
chr19	10378282	10378283	chr19:10378283:G:T	rs147251502	G	T	G	SOX2_HMG_3	-5	0	-	0	0	.
chr19	10378292	10378293	chr19:10378293:G:T	rs56295652	G	T	G	SOX2_HMG_3	-15	0	-	0	0	.
chr19	10461116	10461117	chr19:10461117:G:A	rs144860215	G	A	G	SOX2_HMG_3	24	0	+	0	0	.
chr19	10717710	10717711	chr19:10717711:C:T	rs574488377	C	T	C	SOX2_HMG_3	33	0	-	0	0	.
chr19	10717721	10717722	chr19:10717722:C:T	rs189033896	C	T	C	SOX2_HMG_3	22	0	-	0	0	.
chr19	10874685	10874686	chr19:10874686:C:T	rs7256879	C	T	c	SOX2_HMG_3	29	0	-	0	0	.
chr19	11145115	11145116	chr19:11145116:C:T	rs113568099	C	T	C	SOX2_HMG_3	8	1	-	0.9070722984760988	0.05802835111246951	GAGCCATGGTAGTGTCA
chr19	11193821	11193822	chr19:11193822:C:T	rs755238	C	T	C	SOX2_HMG_3	-6	0	-	0	0	.
chr19	11273530	11273531	chr19:11273531:C:G	rs1869772	C	G	C	SOX2_HMG_3	-13	0	+	0	0	.
chr19	11769001	11769002	chr19:11769002:T:G	rs451036	T	G	G	SOX2_HMG_3	36	0	+	0	0	.
chr19	11881424	11881425	chr19:11881425:C:A	rs142975919	C	A	C	SOX2_HMG_3	22	0	-	0	0	.
chr19	11881445	11881446	chr19:11881446:G:A	rs73921177	G	A	G	SOX2_HMG_3	1	1	-	0.6140217912722782	0.6140217912722782	CCTCACTGGAAGTGTGG
chr19	12384207	12384208	chr19:12384208:C:A	rs8105975	C	A	C	SOX2_HMG_3	25	0	+	0	0	.
chr19	12563939	12563940	chr19:12563940:T:A	rs117961214	T	A	T	SOX2_HMG_3	-6	0	+	0	0	.
chr19	12563940	12563941	chr19:12563941:C:A	rs79337745	C	A	C	SOX2_HMG_3	-5	0	+	0	0	.
chr19	12577591	12577592	chr19:12577592:G:C	rs139062350	G	C	G	SOX2_HMG_3	32	0	-	0	0	.
chr19	12610732	12610733	chr19:12610733:G:T	rs535255350	G	T	G	SOX2_HMG_3	34	0	-	0	0	.
chr19	12610736	12610737	chr19:12610737:C:T	chr19:12610737:C:T	C	T	C	SOX2_HMG_3	30	0	-	0	0	.
chr19	12610754	12610755	chr19:12610755:A:C	rs188742005	A	C	A	SOX2_HMG_3	12	1	-	3.0420623535479208	-3.8666924257672997	GGACAATTGTGTTGAAG
chr19	12630709	12630710	chr19:12630710:T:A	rs118082271	T	A	t	SOX2_HMG_3	12	1	+	12.160791847864477	5.252037068549257	AGACAATGATATTGATG
chr19	12651968	12651969	chr19:12651969:T:C	rs17476839	T	C	C	SOX2_HMG_3	-6	0	+	0	0	.
chr19	12681562	12681563	chr19:12681563:G:A	rs11541391	G	A	G	SOX2_HMG_3	9	1	-	3.773919804410494	4.580589938347539	AGTCAATGCCATGGTGA
chr19	12681575	12681576	chr19:12681576:T:C	rs34610671	T	C	T	SOX2_HMG_3	-4	0	-	0	0	.
chr19	13156367	13156368	chr19:13156368:G:A	rs151115955	G	A	G	SOX2_HMG_3	-20	0	+	0	0	.
chr19	13156370	13156371	chr19:13156371:G:T	rs892020	G	T	G	SOX2_HMG_3	-17	0	+	0	0	.
chr19	13640912	13640913	chr19:13640913:A:G	rs115267620	A	G	A	SOX2_HMG_3	36	0	+	0	0	.
chr19	13790387	13790388	chr19:13790388:G:C	rs76243708	G	C	G	SOX2_HMG_3	17	0	+	0	0	.
chr19	13825015	13825016	chr19:13825016:C:T	rs79438755	C	T	C	SOX2_HMG_3	30	0	+	0	0	.
chr19	13828036	13828037	chr19:13828037:G:C	rs113917348	G	C	C	SOX2_HMG_3	21	0	+	0	0	.
chr19	13866546	13866547	chr19:13866547:C:T	rs910301557	C	T	C	SOX2_HMG_3	-1	0	-	0	0	.
chr19	13900119	13900120	chr19:13900120:A:G	rs7507907	A	G	G	SOX2_HMG_3	-18	0	+	0	0	.
chr19	13913455	13913456	chr19:13913456:C:T	rs61740117	C	T	C	SOX2_HMG_3	20	0	+	0	0	.
chr19	14004905	14004906	chr19:14004906:T:C	rs10401504	T	C	T	SOX2_HMG_3	16	1	-	1.0091113766671223	1.2827989930573933	TATCCATGTTTGTGAGA
chr19	14005247	14005248	chr19:14005248:C:G	rs55641935	C	G	C	SOX2_HMG_3	18	0	-	0	0	.
chr19	15039009	15039010	chr19:15039010:C:A	rs4808880	C	A	C	SOX2_HMG_3	10	1	-	0.5823574118679186	0.5823574118679186	AGTCAATGTGGGTGAGG
chr19	15184322	15184323	chr19:15184323:G:A	rs1043996	G	A	G	SOX2_HMG_3	-9	0	-	0	0	.
chr19	15686598	15686599	chr19:15686599:T:A	rs645827	T	A	A	SOX2_HMG_3	9	1	+	4.34525698299054	2.486681641043811	TAACTATGGTAGTGAAA
chr19	15997391	15997392	chr19:15997392:A:G	rs10422944	A	G	G	SOX2_HMG_3	25	0	-	0	0	.
chr19	16005714	16005715	chr19:16005715:G:T	rs10401940	G	T	G	SOX2_HMG_3	15	1	-	4.507543287124423	6.115350006584559	GAGAAATGGTATTGACT
chr19	16061928	16061929	chr19:16061929:T:C	rs17641704	T	C	T	SOX2_HMG_3	35	0	+	0	0	.
chr19	16077744	16077745	chr19:16077745:A:G	rs4808032	A	G	G	SOX2_HMG_3	0	1	+	7.042859091122386	7.26345337020768	AATCAATTGTGTTGTTG
chr19	16077745	16077746	chr19:16077746:A:C	rs4808451	A	C	C	SOX2_HMG_3	1	1	+	7.042859091122386	4.036815238599072	AATCAATTGTGTTGTTG
chr19	16145679	16145680	chr19:16145680:C:T	rs74472255	C	T	C	SOX2_HMG_3	-10	0	-	0	0	.
chr19	16238439	16238440	chr19:16238440:T:C	rs8100939	T	C	C	SOX2_HMG_3	31	0	-	0	0	.
chr19	16238474	16238475	chr19:16238475:A:G	rs35542939	A	G	A	SOX2_HMG_3	-4	0	-	0	0	.
chr19	16384962	16384963	chr19:16384963:A:C	rs2290669	A	C	A	SOX2_HMG_3	25	0	-	0	0	.
chr19	16445410	16445411	chr19:16445411:G:C	rs79083128	G	C	G	SOX2_HMG_3	21	0	+	0	0	.
chr19	16778914	16778915	chr19:16778915:T:C	rs80269479	T	C	.	SOX2_HMG_3	28	0	+	0	0	.
chr19	16778915	16778916	chr19:16778916:G:A	rs76186997	G	A	.	SOX2_HMG_3	29	0	+	0	0	.
chr19	16906103	16906104	chr19:16906104:T:C	rs111769143	T	C	t	SOX2_HMG_3	-13	0	+	0	0	.
chr19	17088615	17088616	chr19:17088616:G:A	rs6512165	G	A	G	SOX2_HMG_3	31	0	+	0	0	.
chr19	17103316	17103317	chr19:17103317:C:G	rs112537506	C	G	C	SOX2_HMG_3	-19	0	+	0	0	.
chr19	17103361	17103362	chr19:17103362:G:A	rs529384273	G	A	G	SOX2_HMG_3	26	0	+	0	0	.
chr19	17309355	17309356	chr19:17309356:T:C	rs11086068	T	C	T	SOX2_HMG_3	8	1	-	8.775720492119197	9.624764439482824	AAGCAATGAAAGTGAGA
chr19	17309363	17309364	chr19:17309364:T:G	rs561198785	T	G	T	SOX2_HMG_3	0	1	-	8.775720492119197	8.251247869493167	AAGCAATGAAAGTGAGA
chr19	17309519	17309520	chr19:17309520:A:G	rs78023942	A	G	A	SOX2_HMG_3	10	1	+	1.5323286789403534	-5.376426100374866	CACCAATGACAGGGAGG
chr19	17402939	17402940	chr19:17402940:C:A	rs2245519	C	A	A	SOX2_HMG_3	-13	0	+	0	0	.
chr19	17448858	17448859	chr19:17448859:C:T	rs568804626	C	T	C	SOX2_HMG_3	-7	0	+	0	0	.
chr19	17468707	17468708	chr19:17468708:T:A	rs187880723	T	A	t	SOX2_HMG_3	25	0	+	0	0	.
chr19	17636513	17636514	chr19:17636514:A:G	rs76245072	A	G	A	SOX2_HMG_3	5	1	+	6.923086448173095	0.014331668857874735	AATCAATGGAACTGAAC
chr19	17998060	17998061	chr19:17998061:G:A	rs67535954	G	A	G	SOX2_HMG_3	23	0	-	0	0	.
chr19	17998094	17998095	chr19:17998095:G:A	rs73024700	G	A	G	SOX2_HMG_3	-11	0	-	0	0	.
chr19	18264224	18264225	chr19:18264225:A:G	rs35768432	A	G	A	SOX2_HMG_3	29	0	+	0	0	.
chr19	18312216	18312217	chr19:18312217:C:T	rs56240721	C	T	C	SOX2_HMG_3	22	0	-	0	0	.
chr19	18389911	18389912	chr19:18389912:G:A	rs16982345	G	A	G	SOX2_HMG_3	-4	0	+	0	0	.
chr19	18460171	18460172	chr19:18460172:C:G	rs148501338	C	G	C	SOX2_HMG_3	11	1	-	2.813176009353346	-2.462435519659052	GAGGAATGGCAGTGACA
chr19	18735404	18735405	chr19:18735405:C:G	rs10417175	C	G	G	SOX2_HMG_3	23	0	+	0	0	.
chr19	18785054	18785055	chr19:18785055:C:T	rs34467947	C	T	C	SOX2_HMG_3	-11	0	+	0	0	.
chr19	19032557	19032558	chr19:19032558:A:G	chr19:19032558:A:G	A	G	A	SOX2_HMG_3	22	0	-	0	0	.
chr19	19032579	19032580	chr19:19032580:C:A	rs192291761	C	A	C	SOX2_HMG_3	0	1	-	3.360743594082503	2.4783477143225157	GTTCATTGTCATTGGTT
chr19	19032597	19032598	chr19:19032598:G:A	rs58514603	G	A	G	SOX2_HMG_3	-18	0	-	0	0	.
chr19	19752156	19752157	chr19:19752157:C:T	rs247790	C	T	c	SOX2_HMG_3	25	0	-	0	0	.
chr19	19752160	19752161	chr19:19752161:G:C	rs8103257	G	C	g	SOX2_HMG_3	21	0	-	0	0	.
chr19	19959546	19959547	chr19:19959547:A:G	rs529854852	A	G	a	SOX2_HMG_3	-10	0	+	0	0	.
chr19	19997873	19997874	chr19:19997874:G:C	rs796590171	G	C	c	SOX2_HMG_3	32	0	+	0	0	.
chr19	20130120	20130121	chr19:20130121:T:A	rs6511081	T	A	.	SOX2_HMG_3	8	1	+	6.58033743812118	5.593825570892889	CCCCAATGTCAGTGAAA
chr19	20209381	20209382	chr19:20209382:A:C	rs73542118	A	C	.	SOX2_HMG_3	30	0	+	0	0	.
chr19	20318843	20318844	chr19:20318844:A:C	rs12610232	A	C	.	SOX2_HMG_3	2	1	-	9.187472381023145	5.319857546345103	GATCAATGCCACTGAAA
chr19	20423249	20423250	chr19:20423250:T:C	rs7248291	T	C	.	SOX2_HMG_3	0	1	+	3.0597543429753102	3.1970833210239746	TTTCCATGTCAGTGTTA
chr19	20867122	20867123	chr19:20867123:C:T	rs59954926	C	T	c	SOX2_HMG_3	-1	0	-	0	0	.
chr19	20868030	20868031	chr19:20868031:T:C	rs11882347	T	C	-	SOX2_HMG_3	4	1	-	1.9474500597526598	-4.96130471956256	TGTCAGTGAAAGTGAAC
chr19	20911007	20911008	chr19:20911008:A:G	rs147331181	A	G	A	SOX2_HMG_3	-18	0	-	0	0	.
chr19	20970176	20970177	chr19:20970177:C:T	rs13345292	C	T	C	SOX2_HMG_3	1	1	-	4.540230854618918	6.3718784446982095	AGTCAATGCCTGTGAGT
chr19	21130119	21130120	chr19:21130120:A:G	rs2195454	A	G	A	SOX2_HMG_3	-2	0	+	0	0	.
chr19	22053592	22053593	chr19:22053593:C:A	rs6511314	C	A	.	SOX2_HMG_3	26	0	+	0	0	.
chr19	23241589	23241590	chr19:23241590:C:A	rs755188200	C	A	-	SOX2_HMG_3	26	0	-	0	0	.
chr19	23247429	23247430	chr19:23247430:T:C	rs10410902	T	C	-	SOX2_HMG_3	20	0	+	0	0	.
chr19	23491689	23491690	chr19:23491690:G:A	rs10422559	G	A	.	SOX2_HMG_3	27	0	-	0	0	.
chr19	23597960	23597961	chr19:23597961:C:T	rs35810115	C	T	C	SOX2_HMG_3	27	0	+	0	0	.
chr19	23687138	23687139	chr19:23687139:A:G	rs2364625	A	G	G	SOX2_HMG_3	5	1	+	2.087559991889269	-4.821194787425951	GAGCAATGAAAGCGAGA
chr19	24141663	24141664	chr19:24141664:G:A	rs59756985	G	A	G	SOX2_HMG_3	24	0	-	0	0	.
chr19	24372136	24372137	chr19:24372137:C:T	rs2124632	C	T	.	SOX2_HMG_3	25	0	+	0	0	.
chr19	27829126	27829127	chr19:27829127:G:A	rs6510353	G	A	a	SOX2_HMG_3	33	0	-	0	0	.
chr19	27844562	27844563	chr19:27844563:A:G	rs4805673	A	G	g	SOX2_HMG_3	33	0	-	0	0	.
chr19	27894359	27894360	chr19:27894360:A:C	rs17620424	A	C	A	SOX2_HMG_3	32	0	-	0	0	.
chr19	27894592	27894593	chr19:27894593:G:A	rs717661	G	A	G	SOX2_HMG_3	22	0	+	0	0	.
chr19	28227463	28227464	chr19:28227464:G:A	rs118045192	G	A	G	SOX2_HMG_3	2	1	+	6.081938836307582	6.081938836307582	ATGCAATGTCAGTGAGC
chr19	28257744	28257745	chr19:28257745:A:T	rs12973469	A	T	T	SOX2_HMG_3	-19	0	+	0	0	.
chr19	28307985	28307986	chr19:28307986:G:T	rs138814849	G	T	G	SOX2_HMG_3	2	1	-	3.5762956863414495	4.712052921978995	AACCAATGTTAGAGAGA
chr19	28396505	28396506	chr19:28396506:C:T	rs6508821	C	T	C	SOX2_HMG_3	34	0	-	0	0	.
chr19	28467411	28467412	chr19:28467412:G:A	rs58161486	G	A	G	SOX2_HMG_3	36	0	+	0	0	.
chr19	28474178	28474179	chr19:28474179:T:C	rs117318405	T	C	T	SOX2_HMG_3	5	1	-	8.285119828275867	1.3763650489606463	TTTCAATATCAGTGAGA
chr19	28737107	28737108	chr19:28737108:A:G	rs113166443	A	G	.	SOX2_HMG_3	29	0	-	0	0	.
chr19	28737148	28737149	chr19:28737149:G:A	rs10406794	G	A	.	SOX2_HMG_3	-12	0	-	0	0	.
chr19	28838743	28838744	chr19:28838744:A:G	rs6509071	A	G	G	SOX2_HMG_3	-13	0	+	0	0	.
chr19	29034903	29034904	chr19:29034904:T:C	rs10418577	T	C	C	SOX2_HMG_3	4	1	-	0.7212958494211646	-6.1874589298940545	ACTCACTGGCAGTGGGG
chr19	29069421	29069422	chr19:29069422:C:A	rs10406201	C	A	A	SOX2_HMG_3	14	1	-	2.234400114597717	3.703503887084542	TGTCAATGACATTTGAG
chr19	29118274	29118275	chr19:29118275:C:T	rs888303	C	T	C	SOX2_HMG_3	32	0	+	0	0	.
chr19	29185866	29185867	chr19:29185867:C:A	rs10518258	C	A	C	SOX2_HMG_3	23	0	+	0	0	.
chr19	29285501	29285502	chr19:29285502:T:C	rs6509333	T	C	T	SOX2_HMG_3	-19	0	-	0	0	.
chr19	29329692	29329693	chr19:29329693:G:A	rs73540006	G	A	G	SOX2_HMG_3	-3	0	+	0	0	.
chr19	29329704	29329705	chr19:29329705:C:T	rs57265693	C	T	C	SOX2_HMG_3	9	1	+	-0.6105907710636185	0.1960793628734273	GGTTAGTGGCAGTGAGG
chr19	29393921	29393922	chr19:29393922:G:C	rs554253061	G	C	G	SOX2_HMG_3	-9	0	+	0	0	.
chr19	29402377	29402378	chr19:29402378:A:G	rs7248795	A	G	G	SOX2_HMG_3	32	0	+	0	0	.
chr19	29495159	29495160	chr19:29495160:A:G	rs78312071	A	G	G	SOX2_HMG_3	27	0	-	0	0	.
chr19	29595612	29595613	chr19:29595613:A:G	rs68020177	A	G	A	SOX2_HMG_3	35	0	+	0	0	.
chr19	29605738	29605739	chr19:29605739:C:A	rs944855423	C	A	C	SOX2_HMG_3	21	0	-	0	0	.
chr19	29625221	29625222	chr19:29625222:G:A	rs79583940	G	A	G	SOX2_HMG_3	-8	0	+	0	0	.
chr19	29810627	29810628	chr19:29810628:G:A	rs36225398	G	A	G	SOX2_HMG_3	28	0	+	0	0	.
chr19	29846219	29846220	chr19:29846220:A:C	rs4805487	A	C	C	SOX2_HMG_3	0	1	+	2.241025908475415	1.7165532858493857	AAGCACTGTTATTGTCA
chr19	30066343	30066344	chr19:30066344:C:T	rs277094	C	T	C	SOX2_HMG_3	-1	0	+	0	0	.
chr19	30136408	30136409	chr19:30136409:G:T	rs335739	G	T	A	SOX2_HMG_3	2	1	+	2.6895429016898644	6.557157736367906	TAGCCATGACAGTGAAA
chr19	30165244	30165245	chr19:30165245:C:T	rs150851615	C	T	C	SOX2_HMG_3	17	0	-	0	0	.
chr19	30230059	30230060	chr19:30230060:T:C	rs73021604	T	C	C	SOX2_HMG_3	18	0	+	0	0	.
chr19	30418596	30418597	chr19:30418597:G:A	rs10406549	G	A	G	SOX2_HMG_3	-13	0	-	0	0	.
chr19	30443477	30443478	chr19:30443478:G:C	rs10411126	G	C	C	SOX2_HMG_3	-13	0	+	0	0	.
chr19	30601965	30601966	chr19:30601966:C:T	rs8099868	C	T	C	SOX2_HMG_3	18	0	+	0	0	.
chr19	30726406	30726407	chr19:30726407:A:T	rs4805605	A	T	T	SOX2_HMG_3	18	0	-	0	0	.
chr19	30801910	30801911	chr19:30801911:T:C	rs7343067	T	C	C	SOX2_HMG_3	4	1	-	2.1808769198074844	-4.727877859507737	CATCAATGAGAGTGGCA
chr19	30831214	30831215	chr19:30831215:T:G	rs12980345	T	G	T	SOX2_HMG_3	8	1	+	2.5713304225933813	2.4338625027287186	AGGCAATGTTCTTGAGC
chr19	30865085	30865086	chr19:30865086:G:A	rs117629373	G	A	A	SOX2_HMG_3	16	1	+	6.871352101201026	6.597664484810755	AATCAATGTCCGTGACG
chr19	30884677	30884678	chr19:30884678:G:A	rs12975535	G	A	G	SOX2_HMG_3	27	0	+	0	0	.
chr19	30914871	30914872	chr19:30914872:T:C	rs35903101	T	C	T	SOX2_HMG_3	1	1	-	1.9051272001504311	0.07347961007114145	AATCAAAGGTATTTTTA
chr19	31268182	31268183	chr19:31268183:G:A	rs6510196	G	A	A	SOX2_HMG_3	8	1	+	4.105013227705983	3.255969280342355	CCTCAATGGCCGTGAGA
chr19	31838388	31838389	chr19:31838389:C:A	rs146264252	C	A	C	SOX2_HMG_3	1	1	+	8.237429362304988	11.243473214828303	ACACAATTTTAGTGATA
chr19	31943516	31943517	chr19:31943517:A:G	rs527495746	A	G	A	SOX2_HMG_3	-15	0	-	0	0	.
chr19	32104487	32104488	chr19:32104488:A:G	chr19:32104488:A:G	A	G	A	SOX2_HMG_3	34	0	+	0	0	.
chr19	32237602	32237603	chr19:32237603:T:G	chr19:32237603:T:G	T	G	T	SOX2_HMG_3	-12	0	-	0	0	.
chr19	32250960	32250961	chr19:32250961:A:G	rs28629938	A	G	G	SOX2_HMG_3	12	1	+	-0.36790706428769415	-0.36790706428769415	GCTCAATGGCCTAGAGG
chr19	32340448	32340449	chr19:32340449:C:G	rs28625902	C	G	G	SOX2_HMG_3	30	0	-	0	0	.
chr19	32373658	32373659	chr19:32373659:G:A	rs2868083	G	A	A	SOX2_HMG_3	3	1	-	1.96982585044899	-4.938928928866232	TCTCAGTGAAAGTGAAT
chr19	32573438	32573439	chr19:32573439:A:G	rs933644	A	G	G	SOX2_HMG_3	27	0	-	0	0	.
chr19	32774106	32774107	chr19:32774107:A:G	rs58026555	A	G	A	SOX2_HMG_3	5	1	+	0.1831916009710992	-6.725563178344121	GATACATGTCAGTGACG
chr19	32877159	32877160	chr19:32877160:C:T	rs34035782	C	T	C	SOX2_HMG_3	25	0	+	0	0	.
chr19	32911794	32911795	chr19:32911795:G:A	rs12609689	G	A	G	SOX2_HMG_3	7	1	+	3.8708542966897763	1.1420671761284416	CACCAATGCTATGGAGG
chr19	32944858	32944859	chr19:32944859:A:G	rs7251236	A	G	A	SOX2_HMG_3	22	0	-	0	0	.
chr19	33252091	33252092	chr19:33252092:T:G	rs78476878	T	G	G	SOX2_HMG_3	-11	0	-	0	0	.
chr19	33366063	33366064	chr19:33366064:G:T	rs6510376	G	T	T	SOX2_HMG_3	15	1	-	1.4609437744571452	3.0687504939172814	GACCAATTTCATGGACG
chr19	33366073	33366074	chr19:33366074:T:C	rs11878996	T	C	T	SOX2_HMG_3	5	1	-	1.4609437744571452	-5.447811004858075	GACCAATTTCATGGACG
chr19	33366491	33366492	chr19:33366492:T:G	rs4805874	T	G	G	SOX2_HMG_3	12	1	+	5.774340927854546	-1.134413851460675	TATCAATTATTTTGAGT
chr19	33372028	33372029	chr19:33372029:T:G	rs77592544	T	G	T	SOX2_HMG_3	0	1	-	2.7137963941756187	2.1893237715495903	AATAAGTGTCATTGAAA
chr19	33397177	33397178	chr19:33397178:G:A	rs117490768	G	A	G	SOX2_HMG_3	-6	0	+	0	0	.
chr19	33412981	33412982	chr19:33412982:G:C	rs11668968	G	C	G	SOX2_HMG_3	-11	0	-	0	0	.
chr19	33412990	33412991	chr19:33412991:C:A	rs11669220	C	A	C	SOX2_HMG_3	-20	0	-	0	0	.
chr19	33473274	33473275	chr19:33473275:T:C	rs11880064	T	C	C	SOX2_HMG_3	6	1	+	1.94465006298103	-4.964104716334189	GAGCAATGCTACTGGAA
chr19	33478084	33478085	chr19:33478085:T:A	rs61748998	T	A	T	SOX2_HMG_3	20	0	+	0	0	.
chr19	33483947	33483948	chr19:33483948:A:G	rs17834084	A	G	A	SOX2_HMG_3	5	1	+	1.0268783955426817	-5.881876383772537	CGTTAATGGTGTTGAAA
chr19	33498228	33498229	chr19:33498229:G:C	rs3786918	G	C	G	SOX2_HMG_3	13	1	+	2.06263003352308	-4.846124745792141	CTGCAATGGCAGTGGCG
chr19	33578869	33578870	chr19:33578870:G:A	rs62102169	G	A	G	SOX2_HMG_3	7	1	+	5.582746693795253	2.8539595732339165	CAGCAATGGCAATGAAG
chr19	33660872	33660873	chr19:33660873:C:G	rs62103460	C	G	C	SOX2_HMG_3	-8	0	-	0	0	.
chr19	33705291	33705292	chr19:33705292:G:A	rs144665404	G	A	G	SOX2_HMG_3	26	0	-	0	0	.
chr19	33740803	33740804	chr19:33740804:C:T	rs10520203	C	T	C	SOX2_HMG_3	-17	0	+	0	0	.
chr19	33740878	33740879	chr19:33740879:A:G	chr19:33740879:A:G	A	G	A	SOX2_HMG_3	-11	0	+	0	0	.
chr19	33740921	33740922	chr19:33740922:A:T	rs17325700	A	T	A	SOX2_HMG_3	32	0	+	0	0	.
chr19	33831231	33831232	chr19:33831232:A:G	rs11084753	A	G	G	SOX2_HMG_3	12	1	-	3.8292502366168013	-3.079504542698419	ACACAATGTTTTTGAAG
chr19	33885112	33885113	chr19:33885113:G:A	rs2017094	G	A	G	SOX2_HMG_3	-7	0	+	0	0	.
chr19	33887227	33887228	chr19:33887228:C:G	rs4805942	C	G	G	SOX2_HMG_3	-4	0	-	0	0	.
chr19	34181161	34181162	chr19:34181162:C:G	rs117558454	C	G	C	SOX2_HMG_3	27	0	-	0	0	.
chr19	34181161	34181162	chr19:34181162:C:T	chr19:34181162:C:T	C	T	C	SOX2_HMG_3	27	0	-	0	0	.
chr19	34254159	34254160	chr19:34254160:T:C	rs185583631	T	C	T	SOX2_HMG_3	0	1	+	7.164813889695305	7.302142867743969	TGACAATGGTATTGTGT
chr19	34254179	34254180	chr19:34254180:T:C	chr19:34254180:T:C	T	C	T	SOX2_HMG_3	20	0	+	0	0	.
chr19	34592762	34592763	chr19:34592763:T:A	rs73038274	T	A	T	SOX2_HMG_3	-16	0	-	0	0	.
chr19	34801093	34801094	chr19:34801094:T:C	rs1270290	T	C	T	SOX2_HMG_3	4	1	-	1.7657012735293953	-5.143053505785825	GATCACTGACTGTGATA
chr19	34963310	34963311	chr19:34963311:G:T	rs2546027	G	T	G	SOX2_HMG_3	-8	0	-	0	0	.
chr19	35164691	35164692	chr19:35164692:C:T	rs78794409	C	T	N	SOX2_HMG_3	17	0	+	0	0	.
chr19	35176288	35176289	chr19:35176289:G:A	rs7255878	G	A	G	SOX2_HMG_3	-17	0	-	0	0	.
chr19	35383541	35383542	chr19:35383542:A:G	rs9916954	A	G	G	SOX2_HMG_3	-12	0	-	0	0	.
chr19	35392104	35392105	chr19:35392105:G:A	rs75481361	G	A	G	SOX2_HMG_3	22	0	-	0	0	.
chr19	35556471	35556472	chr19:35556472:T:C	rs11084823	T	C	T	SOX2_HMG_3	31	0	+	0	0	.
chr19	35745424	35745425	chr19:35745425:A:G	rs185079492	A	G	A	SOX2_HMG_3	17	0	-	0	0	.
chr19	35758073	35758074	chr19:35758074:T:C	rs58561864	T	C	T	SOX2_HMG_3	5	1	-	1.2254903726419943	-5.683264406673224	GACCAATGAAAGAGAGG
chr19	35773233	35773234	chr19:35773234:C:T	chr19:35773234:C:T	C	T	C	SOX2_HMG_3	8	1	-	1.540676522258369	0.6916325748947401	AAACAGTGGAAGTGACA
chr19	36093878	36093879	chr19:36093879:G:A	rs17639414	G	A	G	SOX2_HMG_3	35	0	+	0	0	.
chr19	38114795	38114796	chr19:38114796:A:G	rs3852911	A	G	A	SOX2_HMG_3	-10	0	+	0	0	.
chr19	38214431	38214432	chr19:38214432:A:C	chr19:38214432:A:C	A	C	A	SOX2_HMG_3	25	0	-	0	0	.
chr19	38700682	38700683	chr19:38700683:C:T	rs77307137	C	T	C	SOX2_HMG_3	-20	0	-	0	0	.
chr19	38850306	38850307	chr19:38850307:G:C	chr19:38850307:G:C	G	C	G	SOX2_HMG_3	23	0	-	0	0	.
chr19	38850326	38850327	chr19:38850327:G:A	rs540167001	G	A	G	SOX2_HMG_3	3	1	-	3.678679918265824	-3.2300748610493963	GACCAATGAAAGTGGGA
chr19	38850330	38850331	chr19:38850331:T:A	rs80347831	T	A	T	SOX2_HMG_3	-1	0	-	0	0	.
chr19	39104416	39104417	chr19:39104417:C:T	rs149772106	C	T	C	SOX2_HMG_3	31	0	-	0	0	.
chr19	39131191	39131192	chr19:39131192:G:T	rs185548609	G	T	G	SOX2_HMG_3	-7	0	-	0	0	.
chr19	39378899	39378900	chr19:39378900:C:G	rs16973374	C	G	G	SOX2_HMG_3	29	0	-	0	0	.
chr19	39431159	39431160	chr19:39431160:C:T	rs113745517	C	T	T	SOX2_HMG_3	33	0	+	0	0	.
chr19	39581937	39581938	chr19:39581938:C:G	rs115245869	C	G	-	SOX2_HMG_3	28	0	-	0	0	.
chr19	39608126	39608127	chr19:39608127:T:C	rs74528820	T	C	-	SOX2_HMG_3	5	1	-	2.5229272606611697	-4.385827518654051	TGTCAATGTACGTGACT
chr19	39660325	39660326	chr19:39660326:A:T	chr19:39660326:A:T	A	T	-	SOX2_HMG_3	24	0	+	0	0	.
chr19	39704542	39704543	chr19:39704543:C:T	rs117106744	C	T	-	SOX2_HMG_3	6	1	-	0.46846483961173147	0.46846483961173147	ACTCACGGGTAGTGATG
chr19	39710126	39710127	chr19:39710127:A:G	rs7249368	A	G	-	SOX2_HMG_3	9	1	-	1.933856579050301	1.1271864451132547	GATCAAAATTAATGATT
chr19	39728921	39728922	chr19:39728922:T:G	rs439881	T	G	-	SOX2_HMG_3	15	1	+	4.335461932845522	2.6680859145778997	CAGAAATGACAGTGATG
chr19	39731002	39731003	chr19:39731003:A:G	rs440191	A	G	-	SOX2_HMG_3	11	1	-	2.5528793786385555	-4.139812119593792	AAGCAATGGGATTGGGG
chr19	39731967	39731968	chr19:39731968:C:T	rs75339357	C	T	-	SOX2_HMG_3	-17	0	-	0	0	.
chr19	39765747	39765748	chr19:39765748:G:C	rs115850560	G	C	G	SOX2_HMG_3	12	1	+	1.3146110724069378	1.3146110724069378	AATAAATGCTATGGACG
chr19	39765769	39765770	chr19:39765770:G:T	rs57145045	G	T	T	SOX2_HMG_3	34	0	+	0	0	.
chr19	39810712	39810713	chr19:39810713:A:G	rs79795592	A	G	A	SOX2_HMG_3	4	1	+	4.945993368620134	-1.9627614106950892	ATTCAACTTTATTGAGA
chr19	39882888	39882889	chr19:39882889:T:C	rs1269211097	T	C	.	SOX2_HMG_3	30	0	-	0	0	.
chr19	39913650	39913651	chr19:39913651:A:G	rs12459958	A	G	.	SOX2_HMG_3	32	0	+	0	0	.
chr19	40165869	40165870	chr19:40165870:C:T	rs148737435	C	T	C	SOX2_HMG_3	13	1	+	2.0004916719948778	2.0004916719948778	AAGCAATTGTAGTCAGT
chr19	40463295	40463296	chr19:40463296:C:T	rs2613843	C	T	T	SOX2_HMG_3	21	0	+	0	0	.
chr19	41032086	41032087	chr19:41032087:C:T	rs10409738	C	T	C	SOX2_HMG_3	9	1	+	1.021104321545744	1.8277744554827897	GGCCATTGGCAGTGAGA
chr19	41444360	41444361	chr19:41444361:A:G	rs17265865	A	G	A	SOX2_HMG_3	5	1	+	1.8857921652115799	-5.0229626141036405	CTGCAATGATATTTAGG
chr19	41530824	41530825	chr19:41530825:C:A	rs74394525	C	A	-	SOX2_HMG_3	32	0	+	0	0	.
chr19	41883981	41883982	chr19:41883982:G:A	rs1388245419	G	A	g	SOX2_HMG_3	-5	0	-	0	0	.
chr19	42075410	42075411	chr19:42075411:C:T	rs1299062568	C	T	C	SOX2_HMG_3	25	0	-	0	0	.
chr19	42075421	42075422	chr19:42075422:C:G	rs143455202	C	G	C	SOX2_HMG_3	14	1	-	4.826049685099367	2.1756285968337936	GGACAATTTCATTGGAA
chr19	42121400	42121401	chr19:42121401:T:C	rs115051406	T	C	T	SOX2_HMG_3	9	1	+	5.149682546442447	4.3430124125054	GACCAATGATACTGAAG
chr19	42515710	42515711	chr19:42515711:G:T	rs10404589	G	T	t	SOX2_HMG_3	-4	0	-	0	0	.
chr19	42865129	42865130	chr19:42865130:G:A	rs144362385	G	A	N	SOX2_HMG_3	-2	0	-	0	0	.
chr19	42923473	42923474	chr19:42923474:A:G	rs10409077	A	G	.	SOX2_HMG_3	-17	0	+	0	0	.
chr19	42993421	42993422	chr19:42993422:G:A	rs8103079	G	A	.	SOX2_HMG_3	21	0	-	0	0	.
chr19	43041520	43041521	chr19:43041521:G:C	rs113205123	G	C	.	SOX2_HMG_3	16	1	+	2.164954376732803	0.16511188181625958	CAGCAATATTGGTGAAG
chr19	43078462	43078463	chr19:43078463:T:G	rs150654417	T	G	.	SOX2_HMG_3	-15	0	-	0	0	.
chr19	43789125	43789126	chr19:43789126:T:C	rs8104447	T	C	T	SOX2_HMG_3	12	1	+	8.10822558456117	1.1994708052459486	GTTCAATGATACTGATA
chr19	44346400	44346401	chr19:44346401:G:A	rs2356881	G	A	G	SOX2_HMG_3	17	0	+	0	0	.
chr19	44367213	44367214	chr19:44367214:T:C	rs16978991	T	C	-	SOX2_HMG_3	10	1	-	3.2228185904342657	-3.685936188880954	GCTCCATGAAAGTGAGG
chr19	44538507	44538508	chr19:44538508:A:C	rs17714646	A	C	A	SOX2_HMG_3	-6	0	-	0	0	.
chr19	44570926	44570927	chr19:44570927:T:G	rs150028856	T	G	T	SOX2_HMG_3	-16	0	-	0	0	.
chr19	44570930	44570931	chr19:44570931:T:G	rs846848	T	G	T	SOX2_HMG_3	-20	0	-	0	0	.
chr19	44663198	44663199	chr19:44663199:G:A	rs73035576	G	A	G	SOX2_HMG_3	-13	0	+	0	0	.
chr19	44774328	44774329	chr19:44774329:G:A	rs57816145	G	A	G	SOX2_HMG_3	31	0	+	0	0	.
chr19	44784591	44784592	chr19:44784592:G:T	rs2927448	G	T	T	SOX2_HMG_3	34	0	+	0	0	.
chr19	44951708	44951709	chr19:44951709:T:C	chr19:44951709:T:C	T	C	T	SOX2_HMG_3	35	0	-	0	0	.
chr19	44951745	44951746	chr19:44951746:G:A	rs568036514	G	A	G	SOX2_HMG_3	-2	0	-	0	0	.
chr19	44953683	44953684	chr19:44953684:G:A	rs3760625	G	A	G	SOX2_HMG_3	29	0	-	0	0	.
chr19	45403323	45403324	chr19:45403324:C:T	chr19:45403324:C:T	C	T	C	SOX2_HMG_3	33	0	+	0	0	.
chr19	45443140	45443141	chr19:45443141:C:T	rs4803823	C	T	C	SOX2_HMG_3	-20	0	+	0	0	.
chr19	45443145	45443146	chr19:45443146:C:T	chr19:45443146:C:T	C	T	C	SOX2_HMG_3	-15	0	+	0	0	.
chr19	45518255	45518256	chr19:45518256:C:T	rs2239378	C	T	C	SOX2_HMG_3	-16	0	-	0	0	.
chr19	45809846	45809847	chr19:45809847:C:T	rs16980027	C	T	C	SOX2_HMG_3	19	0	+	0	0	.
chr19	45877844	45877845	chr19:45877845:G:A	rs112120887	G	A	G	SOX2_HMG_3	-19	0	+	0	0	.
chr19	45999535	45999536	chr19:45999536:T:C	rs17652418	T	C	C	SOX2_HMG_3	-5	0	+	0	0	.
chr19	46126347	46126348	chr19:46126348:A:G	rs761970974	A	G	A	SOX2_HMG_3	-6	0	-	0	0	.
chr19	46133842	46133843	chr19:46133843:T:C	rs11666311	T	C	T	SOX2_HMG_3	-6	0	+	0	0	.
chr19	46209939	46209940	chr19:46209940:C:T	rs2253940	C	T	c	SOX2_HMG_3	33	0	+	0	0	.
chr19	46367044	46367045	chr19:46367045:T:C	rs2239380	T	C	T	SOX2_HMG_3	-1	0	-	0	0	.
chr19	46460179	46460180	chr19:46460180:C:G	rs10418204	C	G	G	SOX2_HMG_3	32	0	-	0	0	.
chr19	46473819	46473820	chr19:46473820:C:T	rs189464510	C	T	C	SOX2_HMG_3	17	0	-	0	0	.
chr19	46563227	46563228	chr19:46563228:A:G	rs117063776	A	G	A	SOX2_HMG_3	20	0	-	0	0	.
chr19	46602458	46602459	chr19:46602459:G:T	rs73056645	G	T	G	SOX2_HMG_3	16	1	+	1.0004625399303784	0.19739209815418862	AATGAATGGCAGTCAGG
chr19	46661454	46661455	chr19:46661455:G:A	rs150695561	G	A	G	SOX2_HMG_3	-4	0	-	0	0	.
chr19	46661462	46661463	chr19:46661463:G:C	rs182541418	G	C	G	SOX2_HMG_3	-12	0	-	0	0	.
chr19	47048742	47048743	chr19:47048743:C:G	rs185998124	C	G	C	SOX2_HMG_3	-7	0	+	0	0	.
chr19	47137961	47137962	chr19:47137962:C:T	rs928973122	C	T	C	SOX2_HMG_3	8	1	-	5.0331958855876735	4.184151938224044	GATCACTTGAAGTGAGG
chr19	47226850	47226851	chr19:47226851:C:A	chr19:47226851:C:A	C	A	c	SOX2_HMG_3	1	1	+	2.0739255638796434	5.0799694164029585	CCTCATTTCTAGTGATC
chr19	47233047	47233048	chr19:47233048:A:G	rs79188018	A	G	A	SOX2_HMG_3	24	0	-	0	0	.
chr19	47233071	47233072	chr19:47233072:C:T	rs28460069	C	T	C	SOX2_HMG_3	0	1	-	8.882750328453495	8.662156049368201	GATCCATGTAAGTGATG
chr19	47484571	47484572	chr19:47484572:G:C	rs8105089	G	C	G	SOX2_HMG_3	-14	0	+	0	0	.
chr19	47600398	47600399	chr19:47600399:T:C	chr19:47600399:T:C	T	C	T	SOX2_HMG_3	-18	0	+	0	0	.
chr19	47723324	47723325	chr19:47723325:A:T	rs3112493	A	T	A	SOX2_HMG_3	-4	0	+	0	0	.
chr19	47728988	47728989	chr19:47728989:C:T	rs11672818	C	T	C	SOX2_HMG_3	-8	0	-	0	0	.
chr19	47762968	47762969	chr19:47762969:T:C	rs4801732	T	C	T	SOX2_HMG_3	30	0	+	0	0	.
chr19	47825481	47825482	chr19:47825482:A:T	rs17272610	A	T	A	SOX2_HMG_3	-14	0	+	0	0	.
chr19	47858816	47858817	chr19:47858817:G:T	rs55636705	G	T	G	SOX2_HMG_3	31	0	-	0	0	.
chr19	47900918	47900919	chr19:47900919:C:T	rs1017993	C	T	C	SOX2_HMG_3	30	0	-	0	0	.
chr19	48011010	48011011	chr19:48011011:C:T	rs62129070	C	T	t	SOX2_HMG_3	9	1	+	3.1005594961288003	3.9072296300658462	CAATAATGACAGTGAAG
chr19	48091689	48091690	chr19:48091690:G:A	rs1654383	G	A	A	SOX2_HMG_3	25	0	+	0	0	.
chr19	48137549	48137550	chr19:48137550:C:T	rs4987068	C	T	C	SOX2_HMG_3	29	0	+	0	0	.
chr19	48256107	48256108	chr19:48256108:A:T	rs10424564	A	T	A	SOX2_HMG_3	30	0	-	0	0	.
chr19	48260491	48260492	chr19:48260492:T:C	rs4802451	T	C	T	SOX2_HMG_3	15	1	+	3.9894513766863904	1.1467422205095321	GATTAATGATATTCATA
chr19	48290916	48290917	chr19:48290917:G:C	rs6509374	G	C	C	SOX2_HMG_3	35	0	-	0	0	.
chr19	48290944	48290945	chr19:48290945:C:T	rs12462913	C	T	C	SOX2_HMG_3	7	1	-	3.456511446943934	0.7277243263825992	GTAAAATGGTAGTGATA
chr19	48330309	48330310	chr19:48330310:T:G	chr19:48330310:T:G	T	G	T	SOX2_HMG_3	-16	0	+	0	0	.
chr19	48330350	48330351	chr19:48330351:A:G	rs4893	A	G	A	SOX2_HMG_3	25	0	+	0	0	.
chr19	48589643	48589644	chr19:48589644:A:G	rs73944836	A	G	A	SOX2_HMG_3	5	1	+	4.975744492532596	-1.9330102867826253	AGTCAATTACAATGAAA
chr19	48703727	48703728	chr19:48703728:G:A	rs602662	G	A	G	SOX2_HMG_3	-17	0	+	0	0	.
chr19	48776777	48776778	chr19:48776778:C:T	rs599486	C	T	C	SOX2_HMG_3	-17	0	-	0	0	.
chr19	48795351	48795352	chr19:48795352:G:A	rs73587806	G	A	G	SOX2_HMG_3	1	1	+	-0.024514916211865967	1.8071326738674243	AGTCATTGGTAGGGAGG
chr19	48838952	48838953	chr19:48838953:C:T	rs77537465	C	T	C	SOX2_HMG_3	26	0	-	0	0	.
chr19	48838979	48838980	chr19:48838980:C:G	rs17206679	C	G	C	SOX2_HMG_3	-1	0	-	0	0	.
chr19	49021036	49021037	chr19:49021037:C:G	rs143151537	C	G	C	SOX2_HMG_3	-8	0	-	0	0	.
chr19	49678471	49678472	chr19:49678472:G:C	rs117146366	G	C	C	SOX2_HMG_3	26	0	+	0	0	.
chr19	49874885	49874886	chr19:49874886:T:C	rs11083985	T	C	T	SOX2_HMG_3	23	0	-	0	0	.
chr19	49908137	49908138	chr19:49908138:C:G	rs11547267	C	G	C	SOX2_HMG_3	30	0	+	0	0	.
chr19	50136345	50136346	chr19:50136346:T:G	rs56215721	T	G	-	SOX2_HMG_3	20	0	-	0	0	.
chr19	50238312	50238313	chr19:50238313:G:A	rs584975	G	A	G	SOX2_HMG_3	21	0	-	0	0	.
chr19	50831098	50831099	chr19:50831099:T:C	rs2560935	T	C	C	SOX2_HMG_3	-5	0	-	0	0	.
chr19	50932479	50932480	chr19:50932480:C:T	rs1701906	C	T	C	SOX2_HMG_3	20	0	-	0	0	.
chr19	51096642	51096643	chr19:51096643:A:T	rs2569502	A	T	A	SOX2_HMG_3	7	1	-	3.756376719227944	3.0723001034001443	GATCAATTGTATAGGAT
chr19	51155573	51155574	chr19:51155574:G:A	rs273664	G	A	G	SOX2_HMG_3	12	1	-	2.809319352111638	9.71807413142686	CTTCAATGGCATCGTGA
chr19	51268029	51268030	chr19:51268030:G:A	rs7258998	G	A	.	SOX2_HMG_3	-1	0	-	0	0	.
chr19	51659802	51659803	chr19:51659803:A:G	rs7248908	A	G	G	SOX2_HMG_3	9	1	-	2.2616961947271506	1.4550260607901044	GGTGAATGGTACTGAAG
chr19	51798406	51798407	chr19:51798407:A:G	rs2902888	A	G	G	SOX2_HMG_3	-5	0	-	0	0	.
chr19	52028817	52028818	chr19:52028818:G:A	rs141676394	G	A	G	SOX2_HMG_3	11	1	+	3.078129409941348	-2.19748211907105	GGTCACTGAAAGTGTTA
chr19	52474059	52474060	chr19:52474060:T:A	rs1617840	T	A	T	SOX2_HMG_3	33	0	+	0	0	.
chr19	52521729	52521730	chr19:52521730:C:G	rs4802968	C	G	N	SOX2_HMG_3	-8	0	+	0	0	.
chr19	52735756	52735757	chr19:52735757:C:G	rs8112235	C	G	c	SOX2_HMG_3	1	1	-	3.94465495844293	2.7702586959989044	AGACAATTACAGTGTAG
chr19	52898506	52898507	chr19:52898507:A:G	rs11881877	A	G	a	SOX2_HMG_3	4	1	+	2.055650626770213	-4.853104152545006	AAGCATTGACATTGTAA
chr19	52957607	52957608	chr19:52957608:G:A	rs11084211	G	A	N	SOX2_HMG_3	20	0	+	0	0	.
chr19	52987960	52987961	chr19:52987961:A:G	rs79743860	A	G	a	SOX2_HMG_3	8	1	-	0.46234207107223946	-0.40939428156362356	GACCTATGTTACTGATG
chr19	53019194	53019195	chr19:53019195:A:G	rs1560097	A	G	G	SOX2_HMG_3	25	0	-	0	0	.
chr19	53133352	53133353	chr19:53133353:T:C	rs28370368	T	C	T	SOX2_HMG_3	-16	0	+	0	0	.
chr19	53223721	53223722	chr19:53223722:C:T	rs10425196	C	T	C	SOX2_HMG_3	-2	0	-	0	0	.
chr19	53264316	53264317	chr19:53264317:C:T	rs2965265	C	T	C	SOX2_HMG_3	23	0	+	0	0	.
chr19	53572335	53572336	chr19:53572336:A:G	rs16985046	A	G	A	SOX2_HMG_3	10	1	+	6.559212036002519	-0.3495427433127023	CAACAATGATATTAATG
chr19	53773147	53773148	chr19:53773148:T:C	rs11084281	T	C	T	SOX2_HMG_3	-3	0	+	0	0	.
chr19	53785591	53785592	chr19:53785592:C:G	rs3848580	C	G	c	SOX2_HMG_3	-18	0	-	0	0	.
chr19	53795321	53795322	chr19:53795322:C:T	rs10418264	C	T	T	SOX2_HMG_3	25	0	-	0	0	.
chr19	53830803	53830804	chr19:53830804:A:T	rs73056718	A	T	A	SOX2_HMG_3	0	1	+	6.583624494845645	5.921822894170952	AATCAATGGAAGGGAGA
chr19	53842506	53842507	chr19:53842507:A:T	rs142919166	A	T	A	SOX2_HMG_3	29	0	+	0	0	.
chr19	53977701	53977702	chr19:53977702:T:C	rs58051381	T	C	T	SOX2_HMG_3	20	0	-	0	0	.
chr19	53977712	53977713	chr19:53977713:T:A	rs116630514	T	A	T	SOX2_HMG_3	9	1	-	3.80802934746187	5.666604689408599	AAACAAGGAAAGTGATG
chr19	54025675	54025676	chr19:54025676:C:G	rs2619223	C	G	G	SOX2_HMG_3	21	0	+	0	0	.
chr19	54110939	54110940	chr19:54110940:G:C	rs73062626	G	C	C	SOX2_HMG_3	31	0	-	0	0	.
chr19	54287933	54287934	chr19:54287934:G:A	rs397600	G	A	a	SOX2_HMG_3	25	0	+	0	0	.
chr19	54415074	54415075	chr19:54415075:T:C	rs17516390	T	C	T	SOX2_HMG_3	14	1	-	1.3265813715285784	-2.855296245772541	GGCCAATTCCATGGATA
chr19	54489605	54489606	chr19:54489606:A:G	rs79543930	A	G	G	SOX2_HMG_3	-13	0	+	0	0	.
chr19	54738369	54738370	chr19:54738370:A:G	rs10414999	A	G	.	SOX2_HMG_3	34	0	+	0	0	.
chr19	54742313	54742314	chr19:54742314:A:C	rs35927204	A	C	.	SOX2_HMG_3	16	1	+	1.3403545214408112	-0.3858003570854611	TCTCATTGTCATTGGGA
chr19	54786177	54786178	chr19:54786178:C:T	rs1489235309	C	T	.	SOX2_HMG_3	33	0	+	0	0	.
chr19	54871700	54871701	chr19:54871701:A:C	rs79584987	A	C	A	SOX2_HMG_3	22	0	-	0	0	.
chr19	55121674	55121675	chr19:55121675:C:T	rs890869	C	T	T	SOX2_HMG_3	5	1	-	4.934348772977476	11.843103552292696	TAACAGTGTCATTGAGG
chr19	55166687	55166688	chr19:55166688:G:A	chr19:55166688:G:A	G	A	g	SOX2_HMG_3	13	1	+	1.5536276278873016	-5.355127151427919	GACCAATGAGAGTGAGC
chr19	55166691	55166692	chr19:55166692:G:A	rs73066642	G	A	g	SOX2_HMG_3	17	0	+	0	0	.
chr19	55766898	55766899	chr19:55766899:G:A	rs67507026	G	A	-	SOX2_HMG_3	20	0	-	0	0	.
chr19	55832265	55832266	chr19:55832266:C:T	rs302473	C	T	T	SOX2_HMG_3	1	1	-	2.507205291839549	4.338852881918838	AGTCAATTGTTTTGGAG
chr19	55932839	55932840	chr19:55932840:G:C	rs513576	G	C	G	SOX2_HMG_3	18	0	-	0	0	.
chr19	56132500	56132501	chr19:56132501:G:T	rs189447122	G	T	G	SOX2_HMG_3	2	1	-	2.905845248930012	4.041602484567558	AACCACTGGCAGTGAGG
chr19	56223108	56223109	chr19:56223109:G:C	rs2011848	G	C	g	SOX2_HMG_3	-13	0	-	0	0	.
chr19	56321555	56321556	chr19:56321556:C:G	rs142139993	C	G	C	SOX2_HMG_3	27	0	-	0	0	.
chr19	56619238	56619239	chr19:56619239:C:A	rs12985817	C	A	C	SOX2_HMG_3	-9	0	-	0	0	.
chr19	56864238	56864239	chr19:56864239:T:C	rs746443855	T	C	T	SOX2_HMG_3	-13	0	+	0	0	.
chr19	56906141	56906142	chr19:56906142:A:G	rs8100148	A	G	G	SOX2_HMG_3	21	0	+	0	0	.
chr19	56906143	56906144	chr19:56906144:G:C	rs8100425	G	C	G	SOX2_HMG_3	23	0	+	0	0	.
chr19	56966651	56966652	chr19:56966652:C:T	rs10423480	C	T	C	SOX2_HMG_3	28	0	-	0	0	.
chr19	57052256	57052257	chr19:57052257:C:T	rs116846217	C	T	C	SOX2_HMG_3	17	0	+	0	0	.
chr19	57224634	57224635	chr19:57224635:A:G	rs77608730	A	G	A	SOX2_HMG_3	5	1	+	0.28828404646800443	-6.620470732847215	GGTCAATGCCAAAGAGG
chr19	57270282	57270283	chr19:57270283:C:G	rs55836057	C	G	C	SOX2_HMG_3	8	1	-	1.5627664615671937	0.8284980287959933	GGACAATGGAACTGACA
chr19	57273265	57273266	chr19:57273266:T:C	rs13344199	T	C	T	SOX2_HMG_3	26	0	-	0	0	.
chr19	57278550	57278551	chr19:57278551:G:A	rs113836204	G	A	G	SOX2_HMG_3	9	1	-	0.8825507719020464	1.6892209058390923	TGGCAATGTCAGGGAGT
chr19	57774690	57774691	chr19:57774691:G:T	rs9749314	G	T	G	SOX2_HMG_3	-10	0	+	0	0	.
chr19	57847175	57847176	chr19:57847176:G:C	rs2007552	G	C	.	SOX2_HMG_3	30	0	-	0	0	.
chr19	57877891	57877892	chr19:57877892:C:G	rs13343787	C	G	.	SOX2_HMG_3	23	0	+	0	0	.
chr19	58099467	58099468	chr19:58099468:T:C	rs1019489	T	C	T	SOX2_HMG_3	34	0	+	0	0	.
chr19	58330572	58330573	chr19:58330573:T:C	rs60348321	T	C	C	SOX2_HMG_3	35	0	-	0	0	.
chr19	58330573	58330574	chr19:58330574:C:T	rs59119314	C	T	C	SOX2_HMG_3	34	0	-	0	0	.
chr19	58372794	58372795	chr19:58372795:G:T	rs62116388	G	T	t	SOX2_HMG_3	23	0	+	0	0	.
chr19	58406622	58406623	chr19:58406623:G:A	chr19:58406623:G:A	G	A	G	SOX2_HMG_3	13	1	+	3.738477210180193	-3.1702775691350276	GCTCAATTCCAGGGATA
chr19	58406622	58406623	chr19:58406623:G:C	rs8106061	G	C	G	SOX2_HMG_3	13	1	+	3.738477210180193	-3.1702775691350276	GCTCAATTCCAGGGATA
chr19	58585016	58585017	chr19:58585017:C:T	rs112047932	C	T	c	SOX2_HMG_3	26	0	+	0	0	.
chr2	646144	646145	chr2:646145:T:C	rs11127491	T	C	C	SOX2_HMG_3	33	0	-	0	0	.
chr2	646158	646159	chr2:646159:G:A	rs35941143	G	A	G	SOX2_HMG_3	19	0	-	0	0	.
chr2	747984	747985	chr2:747985:G:A	rs6761058	G	A	G	SOX2_HMG_3	33	0	-	0	0	.
chr2	748028	748029	chr2:748029:G:A	rs113912290	G	A	G	SOX2_HMG_3	-11	0	-	0	0	.
chr2	905925	905926	chr2:905926:A:T	rs12993793	A	T	A	SOX2_HMG_3	6	1	-	5.236551601662727	-1.6722031776524935	CTGCAATGCCAGTGACA
chr2	1423014	1423015	chr2:1423015:G:A	rs2276701	G	A	G	SOX2_HMG_3	34	0	+	0	0	.
chr2	1519421	1519422	chr2:1519422:T:C	rs28913033	T	C	T	SOX2_HMG_3	-10	0	+	0	0	.
chr2	1538886	1538887	chr2:1538887:T:C	rs138956821	T	C	T	SOX2_HMG_3	31	0	-	0	0	.
chr2	1564068	1564069	chr2:1564069:A:G	rs11886696	A	G	A	SOX2_HMG_3	-6	0	+	0	0	.
chr2	1564077	1564078	chr2:1564078:C:A	rs7591940	C	A	A	SOX2_HMG_3	3	1	+	5.047176902160487	-1.861577877154732	TAGCCATGGCAGTGATG
chr2	1592028	1592029	chr2:1592029:G:A	rs192892779	G	A	G	SOX2_HMG_3	3	1	-	2.6540387383273907	-4.254716040987828	AGGCAATGCTCTTGTTG
chr2	1604993	1604994	chr2:1604994:A:G	rs113247363	A	G	A	SOX2_HMG_3	8	1	-	3.5748324686708526	2.7030961160349896	TGTCAATGTCGGTGACT
chr2	1615296	1615297	chr2:1615297:T:C	rs28442208	T	C	C	SOX2_HMG_3	30	0	+	0	0	.
chr2	1846643	1846644	chr2:1846644:C:T	rs6733896	C	T	T	SOX2_HMG_3	26	0	+	0	0	.
chr2	1953939	1953940	chr2:1953940:G:A	rs73188443	G	A	G	SOX2_HMG_3	-16	0	+	0	0	.
chr2	1978379	1978380	chr2:1978380:C:T	rs6727561	C	T	T	SOX2_HMG_3	11	1	-	9.063042327202693	3.7874307981902935	TTTCAATTATAGTGAGG
chr2	2107518	2107519	chr2:2107519:C:A	rs544759937	C	A	C	SOX2_HMG_3	27	0	-	0	0	.
chr2	2601984	2601985	chr2:2601985:G:T	rs7556672	G	T	T	SOX2_HMG_3	24	0	+	0	0	.
chr2	2605602	2605603	chr2:2605603:C:T	rs4853903	C	T	C	SOX2_HMG_3	1	1	-	2.7030961160349896	4.53474370611428	TGTCAACGCCAGTGACT
chr2	2750930	2750931	chr2:2750931:T:C	rs17038881	T	C	T	SOX2_HMG_3	15	1	-	7.275345551952241	6.84287197040134	GATCAATGAAATTCAAT
chr2	3077270	3077271	chr2:3077271:A:G	rs6705890	A	G	G	SOX2_HMG_3	-11	0	-	0	0	.
chr2	3105917	3105918	chr2:3105918:G:A	rs1993251	G	A	G	SOX2_HMG_3	36	0	-	0	0	.
chr2	3302580	3302581	chr2:3302581:G:A	rs80274430	G	A	G	SOX2_HMG_3	-17	0	+	0	0	.
chr2	3302623	3302624	chr2:3302624:G:A	rs552792463	G	A	G	SOX2_HMG_3	26	0	+	0	0	.
chr2	3315148	3315149	chr2:3315149:C:T	rs10194678	C	T	c	SOX2_HMG_3	1	1	-	4.170326893007029	6.001974483086322	GGGCGATGCTAGTGATG
chr2	3322645	3322646	chr2:3322646:A:G	rs11902010	A	G	a	SOX2_HMG_3	6	1	-	5.44847641305296	-1.4602783662622598	TGTCAATGGAATTCATC
chr2	3333096	3333097	chr2:3333097:A:C	rs7599847	A	C	C	SOX2_HMG_3	8	1	-	2.60919995525952	2.471732035394858	CAGGAATGTCAGTGTTG
chr2	3369213	3369214	chr2:3369214:T:A	rs62119534	T	A	T	SOX2_HMG_3	5	1	-	8.28965370958367	1.380898930268449	AATGAATGAAATTGATT
chr2	3452734	3452735	chr2:3452735:T:C	rs10207406	T	C	T	SOX2_HMG_3	21	0	-	0	0	.
chr2	3834586	3834587	chr2:3834587:A:G	rs2034730	A	G	A	SOX2_HMG_3	6	1	-	3.203558416838095	-3.7051963624771256	GTGCAATGCAAGTGACC
chr2	5094115	5094116	chr2:5094116:G:A	rs13409658	G	A	g	SOX2_HMG_3	-3	0	-	0	0	.
chr2	5593298	5593299	chr2:5593299:C:A	rs17363613	C	A	C	SOX2_HMG_3	0	1	-	4.692379446704665	3.809983566944678	GCTCAATGGCTTTGTTT
chr2	5618713	5618714	chr2:5618714:G:T	rs80265459	G	T	G	SOX2_HMG_3	23	0	-	0	0	.
chr2	5618714	5618715	chr2:5618715:A:T	rs79693745	A	T	A	SOX2_HMG_3	22	0	-	0	0	.
chr2	6012000	6012001	chr2:6012001:G:A	rs2693833	G	A	A	SOX2_HMG_3	11	1	+	5.075385266582916	-0.20022626242948133	GGTCAATTATAGTCATT
chr2	6572417	6572418	chr2:6572418:T:G	rs10186870	T	G	T	SOX2_HMG_3	-11	0	+	0	0	.
chr2	6572423	6572424	chr2:6572424:A:G	rs35660926	A	G	A	SOX2_HMG_3	-5	0	+	0	0	.
chr2	6974152	6974153	chr2:6974153:T:A	rs771254	T	A	A	SOX2_HMG_3	-19	0	+	0	0	.
chr2	7132976	7132977	chr2:7132977:C:T	rs56833078	C	T	C	SOX2_HMG_3	13	1	-	5.0980888807476745	-1.8106658985675455	TATCAAAGGAATTGGTG
chr2	7338765	7338766	chr2:7338766:G:A	rs4668540	G	A	G	SOX2_HMG_3	24	0	+	0	0	.
chr2	7693129	7693130	chr2:7693130:C:T	rs11676467	C	T	T	SOX2_HMG_3	-10	0	+	0	0	.
chr2	7735619	7735620	chr2:7735620:T:C	rs116637960	T	C	T	SOX2_HMG_3	29	0	+	0	0	.
chr2	7764092	7764093	chr2:7764093:T:C	rs6742152	T	C	t	SOX2_HMG_3	-10	0	-	0	0	.
chr2	7963955	7963956	chr2:7963956:G:A	rs17433500	G	A	G	SOX2_HMG_3	13	1	+	4.179070404432221	-2.729684374882999	AAACCATGTCAGTGAGG
chr2	8465000	8465001	chr2:8465001:G:A	rs1875812	G	A	G	SOX2_HMG_3	1	1	-	4.274002796566335	4.274002796566335	GCCCAATGATAGTGTGG
chr2	8543055	8543056	chr2:8543056:G:A	rs6748522	G	A	G	SOX2_HMG_3	19	0	-	0	0	.
chr2	8578299	8578300	chr2:8578300:A:C	rs11904418	A	C	C	SOX2_HMG_3	20	0	+	0	0	.
chr2	8603237	8603238	chr2:8603238:T:C	rs13384855	T	C	t	SOX2_HMG_3	19	0	+	0	0	.
chr2	8637105	8637106	chr2:8637106:G:A	rs139618725	G	A	G	SOX2_HMG_3	-3	0	-	0	0	.
chr2	8827614	8827615	chr2:8827615:C:A	rs12053486	C	A	C	SOX2_HMG_3	20	0	-	0	0	.
chr2	9359729	9359730	chr2:9359730:A:G	rs2715868	A	G	A	SOX2_HMG_3	1	1	+	4.680496526472876	2.848848936393584	CATCAGTCTTATTGATG
chr2	9739575	9739576	chr2:9739576:T:C	rs541739442	T	C	T	SOX2_HMG_3	21	0	-	0	0	.
chr2	9758172	9758173	chr2:9758173:T:C	rs112990746	T	C	T	SOX2_HMG_3	6	1	+	2.8088326189073736	-4.099922160407847	AGGCAATGTTACTGACT
chr2	9773515	9773516	chr2:9773516:G:A	rs1106144	G	A	A	SOX2_HMG_3	0	1	-	2.840323261725984	2.7029942836773206	CGTCAAGGGCAGTGTGG
chr2	9807977	9807978	chr2:9807978:A:G	rs4669468	A	G	A	SOX2_HMG_3	-6	0	-	0	0	.
chr2	9907366	9907367	chr2:9907367:G:A	rs16867226	G	A	A	SOX2_HMG_3	23	0	-	0	0	.
chr2	9907377	9907378	chr2:9907378:A:G	rs6744203	A	G	G	SOX2_HMG_3	12	1	-	1.3632872297013805	-5.54546754961384	GATCAATGGCACTGCAC
chr2	9969151	9969152	chr2:9969152:T:C	rs731169	T	C	T	SOX2_HMG_3	5	1	-	3.4505532731699913	-3.458201506145229	TCTCAATGCTGTTGTAG
chr2	9974284	9974285	chr2:9974285:T:G	rs6733974	T	G	G	SOX2_HMG_3	34	0	+	0	0	.
chr2	9981827	9981828	chr2:9981828:C:T	rs72784441	C	T	C	SOX2_HMG_3	18	0	-	0	0	.
chr2	10030557	10030558	chr2:10030558:A:C	rs73913966	A	C	A	SOX2_HMG_3	4	1	+	4.729113198300576	-2.179641581014645	AATCAATGTCAGTTGTT
chr2	10615437	10615438	chr2:10615438:A:G	rs4233882	A	G	G	SOX2_HMG_3	33	0	+	0	0	.
chr2	10769846	10769847	chr2:10769847:G:A	rs150663372	G	A	G	SOX2_HMG_3	-17	0	+	0	0	.
chr2	10823686	10823687	chr2:10823687:A:G	rs115983125	A	G	A	SOX2_HMG_3	-5	0	+	0	0	.
chr2	10885323	10885324	chr2:10885324:A:G	rs2357882	A	G	G	SOX2_HMG_3	28	0	+	0	0	.
chr2	10932865	10932866	chr2:10932866:G:A	rs1453088	G	A	G	SOX2_HMG_3	34	0	-	0	0	.
chr2	11011325	11011326	chr2:11011326:C:T	rs13022057	C	T	T	SOX2_HMG_3	-6	0	-	0	0	.
chr2	11043316	11043317	chr2:11043317:C:A	rs4668711	C	A	A	SOX2_HMG_3	-1	0	-	0	0	.
chr2	11345605	11345606	chr2:11345606:C:G	rs1400508478	C	G	C	SOX2_HMG_3	18	0	+	0	0	.
chr2	11392227	11392228	chr2:11392228:C:T	rs13001631	C	T	C	SOX2_HMG_3	9	1	+	3.7984525955239308	4.605122729460977	CACCAATGGCATTCAGG
chr2	11825215	11825216	chr2:11825216:G:A	rs74564998	G	A	G	SOX2_HMG_3	-17	0	+	0	0	.
chr2	11933323	11933324	chr2:11933324:G:C	rs7598815	G	C	G	SOX2_HMG_3	-12	0	-	0	0	.
chr2	12097292	12097293	chr2:12097293:G:A	rs12478548	G	A	A	SOX2_HMG_3	18	0	+	0	0	.
chr2	12287842	12287843	chr2:12287843:C:T	rs1020608	C	T	C	SOX2_HMG_3	20	0	-	0	0	.
chr2	12669216	12669217	chr2:12669217:A:C	rs62124709	A	C	A	SOX2_HMG_3	18	0	+	0	0	.
chr2	12777416	12777417	chr2:12777417:A:T	rs2161996	A	T	A	SOX2_HMG_3	9	1	+	2.4509163614748406	4.309491703421569	CATCAATGGAGCTGATA
chr2	12790819	12790820	chr2:12790820:C:T	rs78088565	C	T	C	SOX2_HMG_3	24	0	-	0	0	.
chr2	12812066	12812067	chr2:12812067:A:G	rs7597914	A	G	G	SOX2_HMG_3	21	0	+	0	0	.
chr2	12815722	12815723	chr2:12815723:T:C	rs1544852	T	C	t	SOX2_HMG_3	-11	0	+	0	0	.
chr2	12857876	12857877	chr2:12857877:A:T	rs62124477	A	T	A	SOX2_HMG_3	-19	0	-	0	0	.
chr2	14573029	14573030	chr2:14573030:T:C	rs13412374	T	C	C	SOX2_HMG_3	-10	0	-	0	0	.
chr2	15128619	15128620	chr2:15128620:A:T	rs6431675	A	T	A	SOX2_HMG_3	-5	0	+	0	0	.
chr2	15182452	15182453	chr2:15182453:G:A	rs6730450	G	A	G	SOX2_HMG_3	32	0	-	0	0	.
chr2	15591458	15591459	chr2:15591459:C:T	rs3755133	C	T	C	SOX2_HMG_3	33	0	-	0	0	.
chr2	15591480	15591481	chr2:15591481:C:T	rs4668936	C	T	C	SOX2_HMG_3	11	1	-	7.752788531071811	2.477177002059413	CACCAATGCCAGTGAGT
chr2	15635490	15635491	chr2:15635491:G:A	rs807631	G	A	A	SOX2_HMG_3	-16	0	+	0	0	.
chr2	15818348	15818349	chr2:15818349:A:G	rs565412147	A	G	A	SOX2_HMG_3	11	1	-	8.97059872770154	2.277907229469193	AATCAATTTCATTGGCG
chr2	15825620	15825621	chr2:15825621:T:G	rs16863068	T	G	T	SOX2_HMG_3	27	0	-	0	0	.
chr2	15989859	15989860	chr2:15989860:C:T	rs77669638	C	T	C	SOX2_HMG_3	18	0	+	0	0	.
chr2	16130024	16130025	chr2:16130025:T:A	rs141026745	T	A	A	SOX2_HMG_3	22	0	-	0	0	.
chr2	16167730	16167731	chr2:16167731:G:A	rs36135433	G	A	G	SOX2_HMG_3	22	0	+	0	0	.
chr2	16425305	16425306	chr2:16425306:C:T	rs904434977	C	T	C	SOX2_HMG_3	-20	0	-	0	0	.
chr2	16682724	16682725	chr2:16682725:T:C	rs1524552	T	C	t	SOX2_HMG_3	12	1	+	4.119442215022185	-2.789312564293036	AGTCAAAGGTATTGGGG
chr2	17090666	17090667	chr2:17090667:C:G	rs10172455	C	G	C	SOX2_HMG_3	35	0	+	0	0	.
chr2	17101318	17101319	chr2:17101319:T:C	rs1606940	T	C	T	SOX2_HMG_3	11	1	+	3.950666757005243	-2.7420247412271044	GGTCATTGCAATTGACT
chr2	17314479	17314480	chr2:17314480:T:C	rs62125589	T	C	T	SOX2_HMG_3	5	1	-	2.322405533995431	-4.586349245319788	CATCAAGTGTGTTGATG
chr2	17315869	17315870	chr2:17315870:G:A	rs1519973	G	A	G	SOX2_HMG_3	18	0	-	0	0	.
chr2	17519966	17519967	chr2:17519967:G:A	rs11885715	G	A	G	SOX2_HMG_3	27	0	+	0	0	.
chr2	17607475	17607476	chr2:17607476:G:T	rs62132143	G	T	G	SOX2_HMG_3	27	0	+	0	0	.
chr2	18476532	18476533	chr2:18476533:T:A	rs11680595	T	A	T	SOX2_HMG_3	0	1	-	6.046565819551962	5.384764218877268	ATTCAAGGGCATTGAGA
chr2	18559482	18559483	chr2:18559483:A:G	rs34722188	A	G	A	SOX2_HMG_3	16	1	+	4.923345298609978	5.19703291500025	CTTCAATGACAGTTATA
chr2	19130764	19130765	chr2:19130765:A:G	rs140706629	A	G	A	SOX2_HMG_3	12	1	-	3.4298162706942694	-3.478938508620951	TGTCCATGACATTGTAA
chr2	19607986	19607987	chr2:19607987:A:G	rs6750652	A	G	A	SOX2_HMG_3	-15	0	-	0	0	.
chr2	19625858	19625859	chr2:19625859:C:T	rs1453186	C	T	C	SOX2_HMG_3	23	0	-	0	0	.
chr2	19670381	19670382	chr2:19670382:T:C	rs17619443	T	C	T	SOX2_HMG_3	28	0	-	0	0	.
chr2	19718672	19718673	chr2:19718673:C:G	rs2881742	C	G	C	SOX2_HMG_3	29	0	+	0	0	.
chr2	19769594	19769595	chr2:19769595:T:C	rs13394456	T	C	T	SOX2_HMG_3	22	0	+	0	0	.
chr2	20100483	20100484	chr2:20100484:A:G	rs150268701	A	G	A	SOX2_HMG_3	8	1	+	3.0087316928119834	3.8577756401756127	ATTCCATGACAGTGTTG
chr2	20138012	20138013	chr2:20138013:T:C	rs6531210	T	C	C	SOX2_HMG_3	19	0	+	0	0	.
chr2	20138014	20138015	chr2:20138015:T:G	rs6531211	T	G	G	SOX2_HMG_3	21	0	+	0	0	.
chr2	20209997	20209998	chr2:20209998:A:G	rs3771249	A	G	A	SOX2_HMG_3	6	1	-	11.036967803686622	4.128213024371401	GACCAATGTCAGTGATT
chr2	20216653	20216654	chr2:20216654:C:T	rs114985383	C	T	C	SOX2_HMG_3	33	0	-	0	0	.
chr2	20245877	20245878	chr2:20245878:T:C	rs2110410	T	C	T	SOX2_HMG_3	-10	0	-	0	0	.
chr2	20536603	20536604	chr2:20536604:A:T	rs13382310	A	T	a	SOX2_HMG_3	18	0	+	0	0	.
chr2	20625845	20625846	chr2:20625846:A:T	chr2:20625846:A:T	A	T	A	SOX2_HMG_3	-12	0	+	0	0	.
chr2	20629431	20629432	chr2:20629432:A:G	rs10187254	A	G	G	SOX2_HMG_3	6	1	-	4.516168763960917	-2.3925860153543033	CCTCCATGTCAGTGAGG
chr2	20682673	20682674	chr2:20682674:T:C	rs56220106	T	C	T	SOX2_HMG_3	5	1	-	8.789231567437044	1.8804767881218234	GATTAATGCCAGTGATA
chr2	20682688	20682689	chr2:20682689:A:G	rs13382862	A	G	G	SOX2_HMG_3	-10	0	-	0	0	.
chr2	20727829	20727830	chr2:20727830:T:C	rs4971544	T	C	C	SOX2_HMG_3	27	0	-	0	0	.
chr2	21163614	21163615	chr2:21163615:C:G	rs11683495	C	G	C	SOX2_HMG_3	30	0	-	0	0	.
chr2	21181662	21181663	chr2:21181663:G:T	rs59056084	G	T	A	SOX2_HMG_3	27	0	-	0	0	.
chr2	21301956	21301957	chr2:21301957:A:C	rs391070	A	C	C	SOX2_HMG_3	32	0	-	0	0	.
chr2	21856897	21856898	chr2:21856898:C:T	rs1519491	C	T	C	SOX2_HMG_3	-4	0	-	0	0	.
chr2	22335736	22335737	chr2:22335737:A:G	rs4558612	A	G	A	SOX2_HMG_3	-16	0	+	0	0	.
chr2	22759025	22759026	chr2:22759026:A:G	rs12053564	A	G	G	SOX2_HMG_3	27	0	-	0	0	.
chr2	22802155	22802156	chr2:22802156:G:A	rs13384029	G	A	G	SOX2_HMG_3	3	1	-	3.741111216230281	-3.1676435630849378	AGACGATGTCAGTGATA
chr2	23201052	23201053	chr2:23201053:G:A	rs57493014	G	A	G	SOX2_HMG_3	-10	0	+	0	0	.
chr2	23285169	23285170	chr2:23285170:C:T	rs34506372	C	T	C	SOX2_HMG_3	8	1	+	4.595594937888388	5.467331290524251	TAATAATGCTATTGAGA
chr2	23411768	23411769	chr2:23411769:G:A	rs115595406	G	A	G	SOX2_HMG_3	-5	0	-	0	0	.
chr2	23465057	23465058	chr2:23465058:T:C	rs77418123	T	C	T	SOX2_HMG_3	22	0	+	0	0	.
chr2	23803625	23803626	chr2:23803626:C:A	rs74633660	C	A	C	SOX2_HMG_3	26	0	-	0	0	.
chr2	23901075	23901076	chr2:23901076:A:G	rs77724890	A	G	a	SOX2_HMG_3	13	1	+	6.149887050145252	13.058641829460473	GCTCAATATTATTAATA
chr2	24012103	24012104	chr2:24012104:T:C	rs2339938	T	C	C	SOX2_HMG_3	9	1	+	7.665187312205004	6.858517178267959	CTGCAATGGTATTGACT
chr2	24301855	24301856	chr2:24301856:A:G	rs72793213	A	G	A	SOX2_HMG_3	-19	0	+	0	0	.
chr2	24817553	24817554	chr2:24817554:G:A	rs10178420	G	A	A	SOX2_HMG_3	7	1	+	4.708174909938026	1.9793877893766905	ATTGAATGTCAGTGATC
chr2	24827537	24827538	chr2:24827538:G:A	rs116538472	G	A	G	SOX2_HMG_3	25	0	-	0	0	.
chr2	24893913	24893914	chr2:24893914:C:T	rs6545795	C	T	T	SOX2_HMG_3	27	0	-	0	0	.
chr2	25675815	25675816	chr2:25675816:A:G	rs60619459	A	G	A	SOX2_HMG_3	8	1	-	6.620691299584791	5.7489549469489285	GTTCAATGTCACTGAGA
chr2	25928039	25928040	chr2:25928040:G:C	rs76826407	G	C	C	SOX2_HMG_3	21	0	-	0	0	.
chr2	26067794	26067795	chr2:26067795:A:T	rs75106048	A	T	A	SOX2_HMG_3	5	1	+	5.199427351747576	-1.7093274275676444	ATTCAATGTCTGTGAAA
chr2	26249849	26249850	chr2:26249850:T:C	rs62130460	T	C	T	SOX2_HMG_3	6	1	+	3.6530251034383383	-3.2557296758768812	AATCAATGATCTTGGCA
chr2	26528556	26528557	chr2:26528557:C:T	rs7583853	C	T	T	SOX2_HMG_3	-16	0	+	0	0	.
chr2	26540277	26540278	chr2:26540278:G:A	rs11690336	G	A	G	SOX2_HMG_3	13	1	+	3.9839134504695344	-2.924841328845685	AAACCATTTCATTGAAG
chr2	26568585	26568586	chr2:26568586:A:C	rs939815	A	C	A	SOX2_HMG_3	11	1	-	4.039921752718337	2.622841783498388	GTTGAATGGAATTGACA
chr2	26594929	26594930	chr2:26594930:A:G	rs56414406	A	G	A	SOX2_HMG_3	22	0	-	0	0	.
chr2	26686628	26686629	chr2:26686629:G:A	rs75395732	G	A	G	SOX2_HMG_3	-13	0	+	0	0	.
chr2	26686664	26686665	chr2:26686665:T:C	rs367816469	T	C	T	SOX2_HMG_3	23	0	+	0	0	.
chr2	26734527	26734528	chr2:26734528:C:A	rs1275941	C	A	C	SOX2_HMG_3	19	0	-	0	0	.
chr2	26772324	26772325	chr2:26772325:G:T	rs10170182	G	T	G	SOX2_HMG_3	18	0	+	0	0	.
chr2	26892435	26892436	chr2:26892436:T:C	rs4665919	T	C	T	SOX2_HMG_3	36	0	-	0	0	.
chr2	26942835	26942836	chr2:26942836:G:A	rs370057133	G	A	G	SOX2_HMG_3	33	0	-	0	0	.
chr2	27167300	27167301	chr2:27167301:A:G	rs62128743	A	G	A	SOX2_HMG_3	24	0	+	0	0	.
chr2	27370102	27370103	chr2:27370103:G:A	rs546532403	G	A	G	SOX2_HMG_3	24	0	+	0	0	.
chr2	27518369	27518370	chr2:27518370:T:C	rs780094	T	C	C	SOX2_HMG_3	-7	0	-	0	0	.
chr2	27573658	27573659	chr2:27573659:C:T	rs10165098	C	T	T	SOX2_HMG_3	28	0	+	0	0	.
chr2	27735987	27735988	chr2:27735988:C:G	rs6753736	C	G	C	SOX2_HMG_3	-20	0	-	0	0	.
chr2	27958051	27958052	chr2:27958052:C:G	rs72812510	C	G	G	SOX2_HMG_3	24	0	+	0	0	.
chr2	28096266	28096267	chr2:28096267:A:G	rs3863	A	G	A	SOX2_HMG_3	-2	0	-	0	0	.
chr2	28134683	28134684	chr2:28134684:G:A	rs62140459	G	A	G	SOX2_HMG_3	16	1	-	6.516452194507014	7.713224247647368	CCTCAATAATAGTGAGC
chr2	28239267	28239268	chr2:28239268:G:A	rs17006629	G	A	G	SOX2_HMG_3	-13	0	-	0	0	.
chr2	28287479	28287480	chr2:28287480:A:G	rs10495763	A	G	A	SOX2_HMG_3	10	1	+	6.3718784446982095	-0.5368763346170109	AATCAATGCCAGTTAGT
chr2	28427638	28427639	chr2:28427639:G:A	rs6731639	G	A	A	SOX2_HMG_3	31	0	+	0	0	.
chr2	28997432	28997433	chr2:28997433:C:T	rs74444058	C	T	C	SOX2_HMG_3	16	1	-	3.269014610952456	2.995326994562185	AAGCAATGACAGTGCGG
chr2	29215317	29215318	chr2:29215318:T:C	rs537060196	T	C	T	SOX2_HMG_3	1	1	-	1.3798427841763015	-0.45180480590298866	GATCTATGGCAGAGAAA
chr2	29269932	29269933	chr2:29269933:G:A	rs568987993	G	A	G	SOX2_HMG_3	-10	0	+	0	0	.
chr2	29273682	29273683	chr2:29273683:A:G	rs7587031	A	G	G	SOX2_HMG_3	4	1	+	3.3542497868076064	-3.554504992507613	AATCAGTGCTGTTGATT
chr2	29336932	29336933	chr2:29336933:G:A	rs35506497	G	A	G	SOX2_HMG_3	17	0	+	0	0	.
chr2	29414821	29414822	chr2:29414822:G:A	rs76521269	G	A	G	SOX2_HMG_3	11	1	+	2.8804053318997047	-2.3952061971126932	AGACAATGTTTGTGAGA
chr2	29477216	29477217	chr2:29477217:A:G	rs4467230	A	G	G	SOX2_HMG_3	21	0	-	0	0	.
chr2	29548541	29548542	chr2:29548542:C:A	rs62131120	C	A	C	SOX2_HMG_3	27	0	+	0	0	.
chr2	29586994	29586995	chr2:29586995:G:A	rs11686243	G	A	G	SOX2_HMG_3	-17	0	+	0	0	.
chr2	29655458	29655459	chr2:29655459:A:G	rs954029	A	G	A	SOX2_HMG_3	29	0	-	0	0	.
chr2	29655504	29655505	chr2:29655505:G:A	rs954028	G	A	G	SOX2_HMG_3	-17	0	-	0	0	.
chr2	30153478	30153479	chr2:30153479:A:T	rs13017699	A	T	A	SOX2_HMG_3	27	0	-	0	0	.
chr2	30254280	30254281	chr2:30254281:T:C	rs13027149	T	C	C	SOX2_HMG_3	-12	0	-	0	0	.
chr2	30259232	30259233	chr2:30259233:G:A	rs906864	G	A	G	SOX2_HMG_3	30	0	+	0	0	.
chr2	30362852	30362853	chr2:30362853:A:G	rs75395710	A	G	A	SOX2_HMG_3	19	0	-	0	0	.
chr2	30380932	30380933	chr2:30380933:C:T	rs6707509	C	T	C	SOX2_HMG_3	30	0	-	0	0	.
chr2	30665479	30665480	chr2:30665480:C:A	rs4952173	C	A	C	SOX2_HMG_3	3	1	+	2.2675399280103323	-4.641214851304887	GATCTTTGGCATTGAAT
chr2	30666886	30666887	chr2:30666887:T:C	rs187882345	T	C	T	SOX2_HMG_3	-15	0	-	0	0	.
chr2	30684324	30684325	chr2:30684325:C:T	rs78361702	C	T	C	SOX2_HMG_3	22	0	-	0	0	.
chr2	30744720	30744721	chr2:30744721:T:C	rs72783020	T	C	T	SOX2_HMG_3	27	0	+	0	0	.
chr2	31038382	31038383	chr2:31038383:C:T	rs7565923	C	T	T	SOX2_HMG_3	22	0	-	0	0	.
chr2	31786145	31786146	chr2:31786146:G:A	rs77343015	G	A	A	SOX2_HMG_3	-5	0	+	0	0	.
chr2	31980097	31980098	chr2:31980098:C:T	rs7574910	C	T	T	SOX2_HMG_3	1	1	+	5.900545136049738	5.900545136049738	ACTAAATTATATTGATG
chr2	32356061	32356062	chr2:32356062:G:A	rs947016612	G	A	G	SOX2_HMG_3	31	0	-	0	0	.
chr2	32750932	32750933	chr2:32750933:G:A	rs7585081	G	A	G	SOX2_HMG_3	-19	0	+	0	0	.
chr2	32750954	32750955	chr2:32750955:C:T	rs971511	C	T	C	SOX2_HMG_3	3	1	+	3.0639400843144178	-3.8448146950008026	AATCAAAGTCATTGCAG
chr2	32796212	32796213	chr2:32796213:A:G	rs3906940	A	G	A	SOX2_HMG_3	-6	0	-	0	0	.
chr2	32927010	32927011	chr2:32927011:T:C	rs76617644	T	C	T	SOX2_HMG_3	11	1	+	4.449409376923043	-2.2432821213093046	AGTCAAAGGCATTGTTC
chr2	33086729	33086730	chr2:33086730:G:A	rs219107	G	A	A	SOX2_HMG_3	-15	0	-	0	0	.
chr2	33242890	33242891	chr2:33242891:A:C	rs80086591	A	C	A	SOX2_HMG_3	33	0	-	0	0	.
chr2	33242912	33242913	chr2:33242913:A:G	rs182831851	A	G	A	SOX2_HMG_3	11	1	-	4.139323234683087	-2.5533682635492587	ATTCAGTTTCATTGAGA
chr2	33251064	33251065	chr2:33251065:A:G	rs78270585	A	G	A	SOX2_HMG_3	-2	0	+	0	0	.
chr2	33312235	33312236	chr2:33312236:A:T	rs1277992150	A	T	A	SOX2_HMG_3	19	0	+	0	0	.
chr2	33375347	33375348	chr2:33375348:G:C	rs17585007	G	C	G	SOX2_HMG_3	-8	0	+	0	0	.
chr2	33480930	33480931	chr2:33480931:G:C	rs72865973	G	C	g	SOX2_HMG_3	21	0	+	0	0	.
chr2	33511288	33511289	chr2:33511289:T:G	rs78696285	T	G	T	SOX2_HMG_3	4	1	-	5.49668588824988	-1.4120688910653414	TGTCAATGTTATTTTAG
chr2	33559733	33559734	chr2:33559734:G:A	rs12478742	G	A	G	SOX2_HMG_3	16	1	+	5.59615037365217	5.322462757261898	AAGCAATGTCATGGAGG
chr2	33590316	33590317	chr2:33590317:T:G	rs6708570	T	G	G	SOX2_HMG_3	-2	0	+	0	0	.
chr2	33631862	33631863	chr2:33631863:T:C	rs77739585	T	C	C	SOX2_HMG_3	18	0	+	0	0	.
chr2	33822029	33822030	chr2:33822030:A:G	rs77075221	A	G	A	SOX2_HMG_3	34	0	-	0	0	.
chr2	33953607	33953608	chr2:33953608:G:C	rs7607204	G	C	G	SOX2_HMG_3	3	1	-	4.592490962805892	-2.316263816509328	AGACAATGGTCTTGAAA
chr2	34210436	34210437	chr2:34210437:C:T	rs150404586	C	T	C	SOX2_HMG_3	15	1	-	4.515670734919617	4.9481443164705174	TATCAATGACAATGTGT
chr2	34667233	34667234	chr2:34667234:T:G	rs4670388	T	G	T	SOX2_HMG_3	9	1	-	5.629145021219214	6.681050229228896	GAACAAGGTAATTGATT
chr2	34667249	34667250	chr2:34667250:A:C	rs1527597	A	C	A	SOX2_HMG_3	-7	0	-	0	0	.
chr2	35398569	35398570	chr2:35398570:T:A	rs72786503	T	A	T	SOX2_HMG_3	27	0	+	0	0	.
chr2	35468441	35468442	chr2:35468442:C:G	rs13388298	C	G	C	SOX2_HMG_3	-6	0	-	0	0	.
chr2	35507586	35507587	chr2:35507587:A:G	rs4567910	A	G	G	SOX2_HMG_3	-15	0	-	0	0	.
chr2	35614709	35614710	chr2:35614710:T:C	rs12475450	T	C	T	SOX2_HMG_3	26	0	+	0	0	.
chr2	35788779	35788780	chr2:35788780:C:T	rs7583925	C	T	C	SOX2_HMG_3	-20	0	+	0	0	.
chr2	35788785	35788786	chr2:35788786:T:C	rs7597892	T	C	C	SOX2_HMG_3	-14	0	+	0	0	.
chr2	35788808	35788809	chr2:35788809:T:A	rs7597973	T	A	A	SOX2_HMG_3	9	1	+	6.193981880900354	4.335406538953626	AGTCAGTGATAGTGAAA
chr2	35938764	35938765	chr2:35938765:G:A	rs2968625	G	A	A	SOX2_HMG_3	16	1	+	8.457850302552604	8.184162686162333	TGTCAGTGATATTGATG
chr2	36027886	36027887	chr2:36027887:A:G	rs1397443	A	G	A	SOX2_HMG_3	29	0	+	0	0	.
chr2	36137875	36137876	chr2:36137876:T:C	rs305178	T	C	T	SOX2_HMG_3	11	1	+	2.7490698658507253	-3.9436216323816216	GTTCACTGATATTGGAG
chr2	36352848	36352849	chr2:36352849:G:C	rs13389698	G	C	G	SOX2_HMG_3	-3	0	-	0	0	.
chr2	36468994	36468995	chr2:36468995:A:C	rs147584132	A	C	A	SOX2_HMG_3	7	1	+	4.253447268825025	0.24939217795038537	AGTCTATAGTATTGTTA
chr2	36486241	36486242	chr2:36486242:T:C	rs11890094	T	C	T	SOX2_HMG_3	18	0	-	0	0	.
chr2	36588883	36588884	chr2:36588884:T:C	rs848611	T	C	T	SOX2_HMG_3	22	0	+	0	0	.
chr2	36660135	36660136	chr2:36660136:G:A	rs142659321	G	A	G	SOX2_HMG_3	-13	0	+	0	0	.
chr2	36707743	36707744	chr2:36707744:G:A	rs10182004	G	A	A	SOX2_HMG_3	25	0	-	0	0	.
chr2	36707788	36707789	chr2:36707789:C:T	rs10181855	C	T	T	SOX2_HMG_3	-20	0	-	0	0	.
chr2	36712829	36712830	chr2:36712830:G:A	rs7584029	G	A	g	SOX2_HMG_3	-13	0	+	0	0	.
chr2	37085053	37085054	chr2:37085054:C:G	rs74476475	C	G	C	SOX2_HMG_3	-6	0	-	0	0	.
chr2	37349708	37349709	chr2:37349709:A:G	rs10196818	A	G	A	SOX2_HMG_3	25	0	-	0	0	.
chr2	37377625	37377626	chr2:37377626:G:A	rs4233922	G	A	A	SOX2_HMG_3	-5	0	+	0	0	.
chr2	37378520	37378521	chr2:37378521:C:T	rs7585826	C	T	C	SOX2_HMG_3	1	1	-	1.2947919379360142	3.1264395280153057	GGCCAATGGCAGTCAGG
chr2	37415747	37415748	chr2:37415748:T:G	rs4670708	T	G	T	SOX2_HMG_3	14	1	+	3.229325971897277	1.760222199410452	GCTCCATGACAGTGTTG
chr2	37581467	37581468	chr2:37581468:C:A	rs10208172	C	A	C	SOX2_HMG_3	32	0	+	0	0	.
chr2	37718911	37718912	chr2:37718912:A:G	rs4670768	A	G	G	SOX2_HMG_3	-7	0	-	0	0	.
chr2	37740439	37740440	chr2:37740440:A:G	rs140835244	A	G	A	SOX2_HMG_3	5	1	+	7.817347448599778	0.9085926692845563	AGTCAATGCTGGTGATG
chr2	37832629	37832630	chr2:37832630:C:A	rs749795407	C	A	C	SOX2_HMG_3	8	1	-	4.5745850021143335	4.712052921978996	AAACAAGGGTAGTGAGA
chr2	37918899	37918900	chr2:37918900:A:G	rs75921425	A	G	A	SOX2_HMG_3	10	1	+	7.246047030537987	0.33729225122276674	AATCAATAGCACTGAAG
chr2	38265444	38265445	chr2:38265445:C:T	rs1972974	C	T	C	SOX2_HMG_3	21	0	+	0	0	.
chr2	38729804	38729805	chr2:38729805:A:G	rs2272445	A	G	G	SOX2_HMG_3	-9	0	-	0	0	.
chr2	38806447	38806448	chr2:38806448:T:C	rs3099968	T	C	T	SOX2_HMG_3	6	1	+	3.1363971450242336	-3.7723576342909877	AGTCAGTGGTATTGCTG
chr2	39128088	39128089	chr2:39128089:C:T	rs138847755	C	T	C	SOX2_HMG_3	35	0	-	0	0	.
chr2	39216498	39216499	chr2:39216499:G:A	rs56844025	G	A	G	SOX2_HMG_3	-14	0	-	0	0	.
chr2	39302734	39302735	chr2:39302735:A:G	rs10865150	A	G	G	SOX2_HMG_3	-8	0	+	0	0	.
chr2	39672294	39672295	chr2:39672295:A:G	rs917964	A	G	A	SOX2_HMG_3	-8	0	+	0	0	.
chr2	39772665	39772666	chr2:39772666:T:A	rs1861258	T	A	T	SOX2_HMG_3	34	0	+	0	0	.
chr2	40240833	40240834	chr2:40240834:T:C	rs56410612	T	C	T	SOX2_HMG_3	11	1	-	2.5568296847834375	7.832441213795837	GTGCAATGGCAATGATC
chr2	40245065	40245066	chr2:40245066:T:C	rs961784104	T	C	T	SOX2_HMG_3	5	1	-	5.202236979196084	-1.7065178001191368	GCTCAATTATATTGGCT
chr2	40515342	40515343	chr2:40515343:C:G	rs12479405	C	G	G	SOX2_HMG_3	31	0	-	0	0	.
chr2	40553561	40553562	chr2:40553562:A:G	rs72800323	A	G	A	SOX2_HMG_3	35	0	+	0	0	.
chr2	40680844	40680845	chr2:40680845:G:A	rs17026478	G	A	G	SOX2_HMG_3	6	1	-	5.288381317247636	12.197136096562858	AACCAACGGTATTGAAA
chr2	41077977	41077978	chr2:41077978:A:G	rs17684108	A	G	G	SOX2_HMG_3	-20	0	-	0	0	.
chr2	41329552	41329553	chr2:41329553:T:C	rs13419110	T	C	T	SOX2_HMG_3	33	0	-	0	0	.
chr2	41742849	41742850	chr2:41742850:T:G	rs543142362	T	G	T	SOX2_HMG_3	1	1	-	4.002906811342936	0.996862958819621	TACCTATGGAATTGATA
chr2	41899525	41899526	chr2:41899526:T:C	rs116330645	T	C	T	SOX2_HMG_3	11	1	+	3.4599192395828156	-3.2327722586495313	CTTCAATGTGATTGGAG
chr2	41929065	41929066	chr2:41929066:G:C	rs10495892	G	C	G	SOX2_HMG_3	23	0	-	0	0	.
chr2	42077826	42077827	chr2:42077827:G:A	rs13431388	G	A	G	SOX2_HMG_3	36	0	+	0	0	.
chr2	42128299	42128300	chr2:42128300:G:A	chr2:42128300:G:A	G	A	G	SOX2_HMG_3	25	0	-	0	0	.
chr2	42241330	42241331	chr2:42241331:A:G	rs7583046	A	G	A	SOX2_HMG_3	24	0	-	0	0	.
chr2	42366709	42366710	chr2:42366710:A:C	rs80210883	A	C	A	SOX2_HMG_3	-16	0	-	0	0	.
chr2	42411037	42411038	chr2:42411038:A:T	rs78079912	A	T	A	SOX2_HMG_3	-2	0	-	0	0	.
chr2	42886216	42886217	chr2:42886217:C:T	rs4350801	C	T	C	SOX2_HMG_3	27	0	+	0	0	.
chr2	43026207	43026208	chr2:43026208:C:T	rs2121356	C	T	T	SOX2_HMG_3	-4	0	-	0	0	.
chr2	43032024	43032025	chr2:43032025:C:T	rs10175942	C	T	T	SOX2_HMG_3	-15	0	-	0	0	.
chr2	43081865	43081866	chr2:43081866:G:A	rs774476863	G	A	G	SOX2_HMG_3	33	0	+	0	0	.
chr2	43306074	43306075	chr2:43306075:G:A	rs6719534	G	A	G	SOX2_HMG_3	-9	0	+	0	0	.
chr2	43347875	43347876	chr2:43347876:A:G	rs13382334	A	G	A	SOX2_HMG_3	5	1	+	3.39390592334759	-3.5148488559676303	AGGCAATGTCATGGAAT
chr2	43347906	43347907	chr2:43347907:C:T	rs187272431	C	T	C	SOX2_HMG_3	36	0	+	0	0	.
chr2	43590106	43590107	chr2:43590107:A:G	rs78925283	A	G	A	SOX2_HMG_3	-15	0	+	0	0	.
chr2	43845436	43845437	chr2:43845437:G:T	rs4299376	G	T	T	SOX2_HMG_3	-3	0	+	0	0	.
chr2	43875095	43875096	chr2:43875096:T:C	rs4148220	T	C	T	SOX2_HMG_3	6	1	+	3.8122744654437652	-3.0964803138714543	TAATAATGGCAGTGAAG
chr2	43896618	43896619	chr2:43896619:G:A	rs76850904	G	A	A	SOX2_HMG_3	-9	0	-	0	0	.
chr2	43896619	43896620	chr2:43896620:G:A	rs3795859	G	A	G	SOX2_HMG_3	-10	0	-	0	0	.
chr2	43974119	43974120	chr2:43974120:T:C	rs7593842	T	C	t	SOX2_HMG_3	5	1	-	3.9904539832777903	-2.91830079603743	AGACAATGTAATTGGCA
chr2	44112211	44112212	chr2:44112212:G:A	rs531389657	G	A	G	SOX2_HMG_3	22	0	+	0	0	.
chr2	44268417	44268418	chr2:44268418:T:C	rs1013376003	T	C	T	SOX2_HMG_3	15	1	-	9.140850492886438	8.708376911335538	CAACAATGTAAGTGAAT
chr2	44351338	44351339	chr2:44351339:T:C	rs148747207	T	C	T	SOX2_HMG_3	15	1	-	2.9948846239635807	2.5624110424126796	TATAAATGGTATTTAAG
chr2	44351339	44351340	chr2:44351340:T:C	rs114976582	T	C	T	SOX2_HMG_3	14	1	-	2.9948846239635807	-1.1869929933375387	TATAAATGGTATTTAAG
chr2	44447500	44447501	chr2:44447501:C:T	rs73924767	C	T	C	SOX2_HMG_3	36	0	-	0	0	.
chr2	44498700	44498701	chr2:44498701:C:T	rs76883991	C	T	C	SOX2_HMG_3	3	1	+	3.3613794192311537	-3.5473753600840667	AAACAAAGGAATTGTTG
chr2	44678358	44678359	chr2:44678359:T:C	rs510026	T	C	C	SOX2_HMG_3	27	0	-	0	0	.
chr2	44704380	44704381	chr2:44704381:C:T	rs343989	C	T	T	SOX2_HMG_3	11	1	-	3.979230284293235	-1.2963812447191632	ATTCAATATCCGTGATG
chr2	44786398	44786399	chr2:44786399:T:G	rs343939	T	G	T	SOX2_HMG_3	-5	0	+	0	0	.
chr2	44918721	44918722	chr2:44918722:G:A	rs477659	G	A	A	SOX2_HMG_3	-5	0	-	0	0	.
chr2	45042682	45042683	chr2:45042683:A:G	rs6544780	A	G	G	SOX2_HMG_3	17	0	-	0	0	.
chr2	45056819	45056820	chr2:45056820:G:A	rs7583949	G	A	G	SOX2_HMG_3	21	0	+	0	0	.
chr2	45168157	45168158	chr2:45168158:T:C	rs2063927	T	C	C	SOX2_HMG_3	-17	0	-	0	0	.
chr2	45201611	45201612	chr2:45201612:C:A	rs11688264	C	A	C	SOX2_HMG_3	-5	0	-	0	0	.
chr2	45543592	45543593	chr2:45543593:G:A	rs3770292	G	A	A	SOX2_HMG_3	11	1	+	6.688896180840272	1.4132846518278743	TTTCAATTTCAGTGTAA
chr2	45730025	45730026	chr2:45730026:C:T	rs13405474	C	T	C	SOX2_HMG_3	-19	0	-	0	0	.
chr2	45744242	45744243	chr2:45744243:A:G	rs146130377	A	G	A	SOX2_HMG_3	1	1	+	11.072167754971456	9.240520164892166	AATCAATGGTAGTGGAT
chr2	45804402	45804403	chr2:45804403:C:A	rs62127182	C	A	C	SOX2_HMG_3	-15	0	-	0	0	.
chr2	45849769	45849770	chr2:45849770:C:T	rs10166595	C	T	C	SOX2_HMG_3	-13	0	-	0	0	.
chr2	45936528	45936529	chr2:45936529:C:T	rs1385854720	C	T	C	SOX2_HMG_3	28	0	-	0	0	.
chr2	45936537	45936538	chr2:45936538:C:T	rs6741319	C	T	C	SOX2_HMG_3	19	0	-	0	0	.
chr2	45936538	45936539	chr2:45936539:G:A	rs1350918590	G	A	G	SOX2_HMG_3	18	0	-	0	0	.
chr2	45936566	45936567	chr2:45936567:C:T	rs548196670	C	T	C	SOX2_HMG_3	-10	0	-	0	0	.
chr2	45945971	45945972	chr2:45945972:A:T	rs73926118	A	T	A	SOX2_HMG_3	29	0	+	0	0	.
chr2	46001874	46001875	chr2:46001875:A:T	chr2:46001875:A:T	A	T	A	SOX2_HMG_3	-11	0	+	0	0	.
chr2	46016173	46016174	chr2:46016174:A:G	rs3738898	A	G	G	SOX2_HMG_3	19	0	+	0	0	.
chr2	46016176	46016177	chr2:46016177:C:A	rs77652094	C	A	C	SOX2_HMG_3	22	0	+	0	0	.
chr2	46098782	46098783	chr2:46098783:T:C	rs575758089	T	C	T	SOX2_HMG_3	-15	0	-	0	0	.
chr2	46102279	46102280	chr2:46102280:C:G	rs4953317	C	G	C	SOX2_HMG_3	34	0	-	0	0	.
chr2	46119754	46119755	chr2:46119755:G:C	rs148417321	G	C	G	SOX2_HMG_3	19	0	-	0	0	.
chr2	46131400	46131401	chr2:46131401:A:G	rs564993415	A	G	A	SOX2_HMG_3	32	0	-	0	0	.
chr2	46134115	46134116	chr2:46134116:A:C	rs12105417	A	C	A	SOX2_HMG_3	-15	0	-	0	0	.
chr2	46248657	46248658	chr2:46248658:C:T	rs11681778	C	T	T	SOX2_HMG_3	9	1	+	2.5177969704322063	3.324467104369252	CAGCAATGACGTTGAAC
chr2	46249885	46249886	chr2:46249886:A:G	rs78446731	A	G	A	SOX2_HMG_3	11	1	-	6.741200408235305	0.048508910002958094	ATGCAATTCCATTGAAA
chr2	46261046	46261047	chr2:46261047:C:T	rs17745115	C	T	C	SOX2_HMG_3	16	1	-	4.81260160650238	4.538913990112109	AATCATTTGAAGTGAGG
chr2	46284799	46284800	chr2:46284800:C:T	rs1000531	C	T	T	SOX2_HMG_3	19	0	-	0	0	.
chr2	46284836	46284837	chr2:46284837:T:C	rs1000532	T	C	T	SOX2_HMG_3	-18	0	-	0	0	.
chr2	46303827	46303828	chr2:46303828:A:G	rs79993302	A	G	A	SOX2_HMG_3	28	0	-	0	0	.
chr2	46309969	46309970	chr2:46309970:C:A	rs11886469	C	A	C	SOX2_HMG_3	26	0	-	0	0	.
chr2	46334760	46334761	chr2:46334761:A:C	rs10192945	A	C	A	SOX2_HMG_3	-4	0	+	0	0	.
chr2	46334769	46334770	chr2:46334770:A:G	rs78054941	A	G	A	SOX2_HMG_3	5	1	+	3.7355817330790173	-3.173173046236204	GCTCAATGTTATTTGAG
chr2	46350125	46350126	chr2:46350126:A:C	rs6544888	A	C	A	SOX2_HMG_3	29	0	+	0	0	.
chr2	46363194	46363195	chr2:46363195:C:G	rs1530631	C	G	G	SOX2_HMG_3	30	0	-	0	0	.
chr2	46363244	46363245	chr2:46363245:G:C	rs1530632	G	C	C	SOX2_HMG_3	-20	0	-	0	0	.
chr2	46413908	46413909	chr2:46413909:T:G	rs2881326	T	G	T	SOX2_HMG_3	9	1	-	3.9787823897218786	5.030687597731561	GACCAATTTAATTGGTC
chr2	46486181	46486182	chr2:46486182:T:C	rs4953389	T	C	C	SOX2_HMG_3	10	1	-	5.388095752416615	-1.5206590268986049	TATCAATGGGATTGGAT
chr2	46496079	46496080	chr2:46496080:C:A	rs7590802	C	A	C	SOX2_HMG_3	-11	0	-	0	0	.
chr2	46535508	46535509	chr2:46535509:G:A	rs74331478	G	A	G	SOX2_HMG_3	30	0	-	0	0	.
chr2	46559351	46559352	chr2:46559352:G:A	rs12712976	G	A	A	SOX2_HMG_3	13	1	+	5.356573636821462	-1.5521811424937584	TATTAATGATAGTGTTT
chr2	46798818	46798819	chr2:46798819:C:A	rs17772991	C	A	c	SOX2_HMG_3	34	0	-	0	0	.
chr2	46798821	46798822	chr2:46798822:T:C	rs79114799	T	C	t	SOX2_HMG_3	31	0	-	0	0	.
chr2	46917063	46917064	chr2:46917064:C:G	rs13388612	C	G	G	SOX2_HMG_3	21	0	-	0	0	.
chr2	46980592	46980593	chr2:46980593:C:T	rs11893750	C	T	C	SOX2_HMG_3	31	0	-	0	0	.
chr2	46981835	46981836	chr2:46981836:G:A	rs34800049	G	A	G	SOX2_HMG_3	-19	0	-	0	0	.
chr2	47134839	47134840	chr2:47134840:T:C	rs145474165	T	C	T	SOX2_HMG_3	-10	0	-	0	0	.
chr2	47493505	47493506	chr2:47493506:T:A	rs6759990	T	A	A	SOX2_HMG_3	-15	0	-	0	0	.
chr2	47493509	47493510	chr2:47493510:C:A	rs114866457	C	A	C	SOX2_HMG_3	-19	0	-	0	0	.
chr2	47510258	47510259	chr2:47510259:C:G	rs11891189	C	G	C	SOX2_HMG_3	28	0	-	0	0	.
chr2	47554559	47554560	chr2:47554560:G:A	rs532064493	G	A	G	SOX2_HMG_3	-17	0	+	0	0	.
chr2	47581714	47581715	chr2:47581715:T:C	rs115477902	T	C	T	SOX2_HMG_3	27	0	+	0	0	.
chr2	47716308	47716309	chr2:47716309:G:A	rs61637835	G	A	A	SOX2_HMG_3	25	0	-	0	0	.
chr2	47738549	47738550	chr2:47738550:G:A	rs6760246	G	A	A	SOX2_HMG_3	36	0	+	0	0	.
chr2	47857750	47857751	chr2:47857751:G:A	rs77268227	G	A	G	SOX2_HMG_3	-2	0	+	0	0	.
chr2	48257327	48257328	chr2:48257328:C:T	rs12713007	C	T	C	SOX2_HMG_3	11	1	-	4.2657964558137085	-1.0098150731986897	GAACAGTGGTAGTGAGT
chr2	48303888	48303889	chr2:48303889:G:A	rs11686007	G	A	G	SOX2_HMG_3	26	0	-	0	0	.
chr2	48420886	48420887	chr2:48420887:G:A	rs10454134	G	A	G	SOX2_HMG_3	-3	0	+	0	0	.
chr2	48420919	48420920	chr2:48420920:T:C	rs1387146319	T	C	T	SOX2_HMG_3	30	0	+	0	0	.
chr2	48438459	48438460	chr2:48438460:G:C	rs62137048	G	C	G	SOX2_HMG_3	-20	0	+	0	0	.
chr2	48444626	48444627	chr2:48444627:A:G	rs55757090	A	G	A	SOX2_HMG_3	27	0	+	0	0	.
chr2	48754506	48754507	chr2:48754507:A:G	rs4073656	A	G	A	SOX2_HMG_3	-17	0	+	0	0	.
chr2	48885992	48885993	chr2:48885993:A:G	rs116040692	A	G	A	SOX2_HMG_3	28	0	-	0	0	.
chr2	48906783	48906784	chr2:48906784:A:G	rs10170423	A	G	G	SOX2_HMG_3	14	1	+	2.980191382273846	-1.2016862350272735	AAACAATAGCAGAGATG
chr2	49110816	49110817	chr2:49110817:C:T	rs2349715	C	T	T	SOX2_HMG_3	-3	0	+	0	0	.
chr2	49110836	49110837	chr2:49110837:C:T	rs7597101	C	T	C	SOX2_HMG_3	17	0	+	0	0	.
chr2	49433196	49433197	chr2:49433197:G:A	rs1569110	G	A	G	SOX2_HMG_3	-12	0	-	0	0	.
chr2	49737210	49737211	chr2:49737211:G:A	rs17489439	G	A	G	SOX2_HMG_3	-13	0	-	0	0	.
chr2	50395563	50395564	chr2:50395564:C:A	rs12713097	C	A	C	SOX2_HMG_3	8	1	-	4.162838055767877	4.300305975632539	ATTCAATTGAAGTGGAT
chr2	50398378	50398379	chr2:50398379:T:A	rs1969351	T	A	T	SOX2_HMG_3	-12	0	+	0	0	.
chr2	51031556	51031557	chr2:51031557:C:A	rs2287233	C	A	C	SOX2_HMG_3	-11	0	-	0	0	.
chr2	52073333	52073334	chr2:52073334:G:A	rs2355196	G	A	A	SOX2_HMG_3	33	0	+	0	0	.
chr2	52365917	52365918	chr2:52365918:C:G	rs4971810	C	G	G	SOX2_HMG_3	-8	0	+	0	0	.
chr2	52681488	52681489	chr2:52681489:T:C	rs350792	T	C	C	SOX2_HMG_3	31	0	-	0	0	.
chr2	52704993	52704994	chr2:52704994:T:C	rs6738153	T	C	T	SOX2_HMG_3	11	1	+	6.101081015912886	-0.5916104823194608	AGAGAATGGTATTGATG
chr2	52867649	52867650	chr2:52867650:T:C	rs10173886	T	C	T	SOX2_HMG_3	11	1	+	7.831656129205598	1.1389646309732502	GGTCTATGATATTGAAA
chr2	53243695	53243696	chr2:53243696:T:C	rs1364681	T	C	T	SOX2_HMG_3	20	0	-	0	0	.
chr2	53248119	53248120	chr2:53248120:T:C	rs13399090	T	C	T	SOX2_HMG_3	6	1	+	4.235168898889543	-2.673585880425676	CATAAATTCCAGTGAAT
chr2	53498628	53498629	chr2:53498629:T:C	rs10193431	T	C	C	SOX2_HMG_3	-4	0	+	0	0	.
chr2	54093637	54093638	chr2:54093638:G:C	rs13418839	G	C	G	SOX2_HMG_3	7	1	+	4.383910179460941	-2.3489320319750324	TAACAATGATATTAAAT
chr2	54093661	54093662	chr2:54093662:C:T	rs13418658	C	T	C	SOX2_HMG_3	31	0	+	0	0	.
chr2	54275123	54275124	chr2:54275124:T:A	rs77999713	T	A	T	SOX2_HMG_3	-17	0	-	0	0	.
chr2	54528091	54528092	chr2:54528092:A:G	rs3796022	A	G	A	SOX2_HMG_3	23	0	-	0	0	.
chr2	54528740	54528741	chr2:54528741:A:G	rs4319969	A	G	A	SOX2_HMG_3	4	1	+	4.334598464818697	-2.5741563144965216	GAGCATTGCTAGTGAGG
chr2	54590315	54590316	chr2:54590316:A:T	rs10206143	A	T	T	SOX2_HMG_3	-16	0	+	0	0	.
chr2	54801369	54801370	chr2:54801370:C:T	rs112235365	C	T	C	SOX2_HMG_3	31	0	+	0	0	.
chr2	54953300	54953301	chr2:54953301:A:G	rs17046510	A	G	A	SOX2_HMG_3	-17	0	-	0	0	.
chr2	55421201	55421202	chr2:55421202:A:G	rs3762512	A	G	A	SOX2_HMG_3	14	1	+	3.5605848466079197	-0.6212927706931997	TATAAATGTCATTAATG
chr2	55618925	55618926	chr2:55618926:A:G	rs571745368	A	G	A	SOX2_HMG_3	-10	0	+	0	0	.
chr2	55618929	55618930	chr2:55618930:A:G	rs1404460700	A	G	A	SOX2_HMG_3	-6	0	+	0	0	.
chr2	55883534	55883535	chr2:55883535:C:A	rs17047297	C	A	C	SOX2_HMG_3	33	0	+	0	0	.
chr2	55992527	55992528	chr2:55992528:A:G	rs956251483	A	G	A	SOX2_HMG_3	-5	0	+	0	0	.
chr2	56514884	56514885	chr2:56514885:T:C	rs7606299	T	C	T	SOX2_HMG_3	6	1	+	4.278323490604805	-2.630431288710416	GCTCTATGATAGTGAGT
chr2	56576229	56576230	chr2:56576230:G:A	rs4672142	G	A	G	SOX2_HMG_3	-10	0	-	0	0	.
chr2	57171865	57171866	chr2:57171866:T:C	rs984663	T	C	C	SOX2_HMG_3	19	0	+	0	0	.
chr2	57214574	57214575	chr2:57214575:C:T	rs4390805	C	T	C	SOX2_HMG_3	8	1	+	3.2968357554641567	4.168572108100021	GACCAATGCTATTTTTA
chr2	57237416	57237417	chr2:57237417:G:A	rs75345425	G	A	G	SOX2_HMG_3	27	0	+	0	0	.
chr2	57598011	57598012	chr2:57598012:T:A	rs7577676	T	A	A	SOX2_HMG_3	-4	0	+	0	0	.
chr2	57764976	57764977	chr2:57764977:G:A	rs13032423	G	A	g	SOX2_HMG_3	1	1	+	6.259196875442373	8.090844465521663	CGTCAATGATAGTGGCT
chr2	59077751	59077752	chr2:59077752:G:A	rs13011586	G	A	G	SOX2_HMG_3	33	0	+	0	0	.
chr2	59806348	59806349	chr2:59806349:C:T	rs7565849	C	T	T	SOX2_HMG_3	5	1	-	7.362779478092377	14.271534257407598	GCTCAGTGATATTGATT
chr2	59909391	59909392	chr2:59909392:T:C	rs73932454	T	C	T	SOX2_HMG_3	19	0	+	0	0	.
chr2	59997193	59997194	chr2:59997194:A:T	rs6731782	A	T	T	SOX2_HMG_3	-15	0	+	0	0	.
chr2	60125840	60125841	chr2:60125841:C:T	rs115277064	C	T	C	SOX2_HMG_3	16	1	-	7.918693519691859	7.645005903301588	AATCAATTTAATTGGCG
chr2	60441800	60441801	chr2:60441801:A:G	rs75617493	A	G	A	SOX2_HMG_3	5	1	+	2.1541644045120947	-4.754590374803126	GATCAAGGCCAGTAATG
chr2	60992879	60992880	chr2:60992880:C:T	rs10182774	C	T	C	SOX2_HMG_3	28	0	+	0	0	.
chr2	61117759	61117760	chr2:61117760:T:C	rs77001332	T	C	T	SOX2_HMG_3	5	1	-	2.1036284646071133	-4.805126314708106	GGTCAATGTGAATGATC
chr2	61671761	61671762	chr2:61671762:A:G	chr2:61671762:A:G	A	G	A	SOX2_HMG_3	-18	0	+	0	0	.
chr2	61715710	61715711	chr2:61715711:C:A	rs2421436	C	A	C	SOX2_HMG_3	13	1	-	6.14295365381039	-0.7658011255048303	ATCCAATGTCAGTGAGT
chr2	61764429	61764430	chr2:61764430:C:T	rs117196790	C	T	C	SOX2_HMG_3	-7	0	+	0	0	.
chr2	61764468	61764469	chr2:61764469:G:A	rs1186869	G	A	G	SOX2_HMG_3	32	0	+	0	0	.
chr2	61764471	61764472	chr2:61764472:G:A	chr2:61764472:G:A	G	A	g	SOX2_HMG_3	35	0	+	0	0	.
chr2	61855516	61855517	chr2:61855517:G:C	rs7567278	G	C	C	SOX2_HMG_3	-14	0	-	0	0	.
chr2	62294969	62294970	chr2:62294970:G:A	rs4558575	G	A	A	SOX2_HMG_3	-8	0	-	0	0	.
chr2	62497779	62497780	chr2:62497780:G:C	rs62178012	G	C	G	SOX2_HMG_3	10	1	+	2.106139087916975	2.106139087916975	GCTAAATGGTGTTGATG
chr2	62550555	62550556	chr2:62550556:T:G	rs150887853	T	G	T	SOX2_HMG_3	10	1	-	3.664267998101645	-3.2444867812135745	AAGCATTTGCAGTGATG
chr2	62774003	62774004	chr2:62774004:C:T	rs1123508	C	T	C	SOX2_HMG_3	-7	0	+	0	0	.
chr2	63743327	63743328	chr2:63743328:A:T	rs17619855	A	T	A	SOX2_HMG_3	16	1	+	4.167088151307478	3.63770532592156	CATCAATGTTAGAGTCA
chr2	64067447	64067448	chr2:64067448:T:C	rs35939512	T	C	T	SOX2_HMG_3	35	0	+	0	0	.
chr2	64258330	64258331	chr2:64258331:T:G	rs2251764	T	G	T	SOX2_HMG_3	-10	0	-	0	0	.
chr2	64266011	64266012	chr2:64266012:A:G	rs869739	A	G	G	SOX2_HMG_3	-14	0	-	0	0	.
chr2	64367768	64367769	chr2:64367769:T:C	rs4233932	T	C	C	SOX2_HMG_3	22	0	-	0	0	.
chr2	64367784	64367785	chr2:64367785:A:T	rs4233933	A	T	T	SOX2_HMG_3	6	1	-	4.800000605244193	-2.108754174071028	AATCATTTCTATTGTAA
chr2	64405434	64405435	chr2:64405435:A:G	rs72812038	A	G	A	SOX2_HMG_3	15	1	-	1.7877716937596135	-1.0549374624172447	GCCCAATGGCTGTGATG
chr2	64515489	64515490	chr2:64515490:T:C	rs78136426	T	C	t	SOX2_HMG_3	-11	0	-	0	0	.
chr2	64515493	64515494	chr2:64515494:A:G	rs183575940	A	G	a	SOX2_HMG_3	-15	0	-	0	0	.
chr2	64679021	64679022	chr2:64679022:G:A	rs549052290	G	A	G	SOX2_HMG_3	13	1	+	5.356377522480404	-1.5523772568348164	GGTTAATTTTAGTGAAA
chr2	64915385	64915386	chr2:64915386:T:A	rs149257374	T	A	T	SOX2_HMG_3	-8	0	+	0	0	.
chr2	64954118	64954119	chr2:64954119:A:C	rs6725785	A	C	A	SOX2_HMG_3	12	1	-	5.228168496973365	-1.6805862823418545	TGTGAATGGAAGTGATT
chr2	65135034	65135035	chr2:65135035:T:C	rs4671118	T	C	C	SOX2_HMG_3	10	1	-	4.183682831949566	-2.7250719473656546	TCTTAATTTCATTGAAG
chr2	65226786	65226787	chr2:65226787:T:C	rs34813149	T	C	T	SOX2_HMG_3	19	0	+	0	0	.
chr2	65421402	65421403	chr2:65421403:T:C	rs76707106	T	C	T	SOX2_HMG_3	-14	0	-	0	0	.
chr2	65565911	65565912	chr2:65565912:A:G	rs73935237	A	G	A	SOX2_HMG_3	2	1	-	4.076905992875956	-0.9264660774396318	CTTCTATGCCAGTGAAG
chr2	65624001	65624002	chr2:65624002:C:T	rs112832799	C	T	C	SOX2_HMG_3	-3	0	+	0	0	.
chr2	65686952	65686953	chr2:65686953:T:A	rs10490612	T	A	T	SOX2_HMG_3	-11	0	+	0	0	.
chr2	65911656	65911657	chr2:65911657:A:G	rs719832	A	G	G	SOX2_HMG_3	27	0	-	0	0	.
chr2	65923710	65923711	chr2:65923711:C:T	rs17031141	C	T	T	SOX2_HMG_3	24	0	+	0	0	.
chr2	66364824	66364825	chr2:66364825:G:A	rs75182730	G	A	G	SOX2_HMG_3	-17	0	-	0	0	.
chr2	66430669	66430670	chr2:66430670:C:T	rs10200708	C	T	C	SOX2_HMG_3	30	0	+	0	0	.
chr2	66522477	66522478	chr2:66522478:A:G	rs4430933	A	G	A	SOX2_HMG_3	9	1	+	5.687148561284081	1.1063735321307107	CAACAATGTATTTGATG
chr2	66542021	66542022	chr2:66542022:C:T	rs17625742	C	T	C	SOX2_HMG_3	17	0	+	0	0	.
chr2	66580977	66580978	chr2:66580978:C:A	rs185383898	C	A	C	SOX2_HMG_3	33	0	+	0	0	.
chr2	66635653	66635654	chr2:66635654:A:G	rs72808818	A	G	A	SOX2_HMG_3	-20	0	-	0	0	.
chr2	66854374	66854375	chr2:66854375:G:A	rs12713575	G	A	G	SOX2_HMG_3	-11	0	-	0	0	.
chr2	67269303	67269304	chr2:67269304:G:A	rs2062203	G	A	G	SOX2_HMG_3	8	1	+	3.3352138337936132	2.486169886429984	GGACAATGGTATTCTTA
chr2	67641588	67641589	chr2:67641589:A:G	rs1549783	A	G	A	SOX2_HMG_3	5	1	+	3.4990985320652714	-3.409656247249949	CATTAATTTCAGTGACT
chr2	67895096	67895097	chr2:67895097:C:G	rs6546339	C	G	G	SOX2_HMG_3	24	0	+	0	0	.
chr2	68156768	68156769	chr2:68156769:C:T	rs79883557	C	T	C	SOX2_HMG_3	34	0	-	0	0	.
chr2	68212035	68212036	chr2:68212036:C:A	rs4296409	C	A	A	SOX2_HMG_3	-18	0	+	0	0	.
chr2	68302549	68302550	chr2:68302550:A:G	rs6746740	A	G	A	SOX2_HMG_3	29	0	-	0	0	.
chr2	68591409	68591410	chr2:68591410:G:T	rs75150717	G	T	G	SOX2_HMG_3	19	0	+	0	0	.
chr2	68733678	68733679	chr2:68733679:C:T	rs72828875	C	T	C	SOX2_HMG_3	23	0	-	0	0	.
chr2	68739381	68739382	chr2:68739382:T:A	rs55952990	T	A	A	SOX2_HMG_3	32	0	+	0	0	.
chr2	68789509	68789510	chr2:68789510:A:G	rs17602799	A	G	A	SOX2_HMG_3	12	1	-	3.7268127930741946	-3.1819419862410268	AATCAATGCTAATGTCC
chr2	68909030	68909031	chr2:68909031:T:G	rs79143619	T	G	T	SOX2_HMG_3	19	0	-	0	0	.
chr2	68989317	68989318	chr2:68989318:A:G	rs10198493	A	G	G	SOX2_HMG_3	6	1	-	5.314882238596134	-1.5938725407190855	GATCAATGTATTTGGTT
chr2	68989327	68989328	chr2:68989328:G:T	rs62135595	G	T	G	SOX2_HMG_3	-4	0	-	0	0	.
chr2	69128813	69128814	chr2:69128814:G:A	rs75430990	G	A	G	SOX2_HMG_3	-6	0	+	0	0	.
chr2	69176749	69176750	chr2:69176750:G:T	rs34081493	G	T	G	SOX2_HMG_3	7	1	+	5.8505897328245275	3.8058792280909906	GTTCAATGACATTTAAA
chr2	69625360	69625361	chr2:69625361:A:C	rs6750389	A	C	A	SOX2_HMG_3	-14	0	+	0	0	.
chr2	69644508	69644509	chr2:69644509:G:T	rs76498379	G	T	G	SOX2_HMG_3	33	0	+	0	0	.
chr2	69689491	69689492	chr2:69689492:A:G	rs12472483	A	G	A	SOX2_HMG_3	11	1	-	6.025486021123303	-0.6672054771090437	AAGTAATTTTATTGATG
chr2	69739787	69739788	chr2:69739788:C:G	rs546258743	C	G	C	SOX2_HMG_3	-12	0	-	0	0	.
chr2	69837794	69837795	chr2:69837795:C:A	rs1377996	C	A	A	SOX2_HMG_3	-20	0	+	0	0	.
chr2	69949410	69949411	chr2:69949411:C:T	rs10165166	C	T	C	SOX2_HMG_3	32	0	-	0	0	.
chr2	69999007	69999008	chr2:69999008:G:A	rs4853243	G	A	G	SOX2_HMG_3	-17	0	+	0	0	.
chr2	70368265	70368266	chr2:70368266:G:C	rs4852172	G	C	G	SOX2_HMG_3	35	0	-	0	0	.
chr2	70726612	70726613	chr2:70726613:C:T	rs1030044	C	T	T	SOX2_HMG_3	16	1	-	7.327055662521547	7.053368046131275	CATCAAGTTCATTGAAG
chr2	70750517	70750518	chr2:70750518:C:T	rs35164773	C	T	C	SOX2_HMG_3	20	0	+	0	0	.
chr2	71036365	71036366	chr2:71036366:A:G	rs9679679	A	G	.	SOX2_HMG_3	29	0	+	0	0	.
chr2	71119201	71119202	chr2:71119202:A:G	rs6546677	A	G	.	SOX2_HMG_3	-3	0	+	0	0	.
chr2	71241103	71241104	chr2:71241104:G:A	rs548294388	G	A	g	SOX2_HMG_3	31	0	-	0	0	.
chr2	71261813	71261814	chr2:71261814:G:T	rs2609505	G	T	G	SOX2_HMG_3	0	1	+	6.913634818509543	6.031238938749555	GGTCAATGGAAGTCATG
chr2	71464473	71464474	chr2:71464474:C:T	rs78130680	C	T	T	SOX2_HMG_3	11	1	-	4.194749164675898	-1.0808623643365005	TATCAACTCCAGTGAGA
chr2	71576049	71576050	chr2:71576050:C:T	rs745917	C	T	T	SOX2_HMG_3	-5	0	+	0	0	.
chr2	71711057	71711058	chr2:71711058:A:G	rs1896496	A	G	G	SOX2_HMG_3	10	1	+	6.593926103741971	-0.31482867557324967	CATCAGTGCTATTGTAG
chr2	71851198	71851199	chr2:71851199:A:G	rs115404663	A	G	A	SOX2_HMG_3	6	1	-	4.248031404503043	-2.6607233748121764	GGTAAATTGAATTGAAT
chr2	71893028	71893029	chr2:71893029:A:G	rs17007566	A	G	G	SOX2_HMG_3	20	0	+	0	0	.
chr2	72099522	72099523	chr2:72099523:A:C	rs10198511	A	C	C	SOX2_HMG_3	-13	0	-	0	0	.
chr2	72781605	72781606	chr2:72781606:T:C	rs11900751	T	C	T	SOX2_HMG_3	0	1	-	8.419606894808213	8.640201173893507	ATGCAATTTTATTGAAA
chr2	72846507	72846508	chr2:72846508:C:T	rs78506316	C	T	C	SOX2_HMG_3	26	0	+	0	0	.
chr2	73162775	73162776	chr2:73162776:G:A	rs56293717	G	A	G	SOX2_HMG_3	10	1	+	2.5063861590748004	9.41514093839002	GGTCAATGATGGTGGAG
chr2	73162787	73162788	chr2:73162788:T:C	rs13413175	T	C	C	SOX2_HMG_3	22	0	+	0	0	.
chr2	73384973	73384974	chr2:73384974:C:T	rs12465867	C	T	C	SOX2_HMG_3	-12	0	-	0	0	.
chr2	73707516	73707517	chr2:73707517:G:A	rs78071540	G	A	g	SOX2_HMG_3	-1	0	+	0	0	.
chr2	73882893	73882894	chr2:73882894:A:G	rs10519327	A	G	G	SOX2_HMG_3	31	0	+	0	0	.
chr2	73911010	73911011	chr2:73911011:C:T	rs2463120	C	T	C	SOX2_HMG_3	5	1	-	4.9266847534688605	11.835439532784081	ATACAGTGGTATTGATG
chr2	73936803	73936804	chr2:73936804:G:C	rs831528	G	C	C	SOX2_HMG_3	-18	0	+	0	0	.
chr2	74389531	74389532	chr2:74389532:A:G	rs6740481	A	G	A	SOX2_HMG_3	20	0	+	0	0	.
chr2	75134737	75134738	chr2:75134738:T:C	rs3771827	T	C	C	SOX2_HMG_3	19	0	-	0	0	.
chr2	75287838	75287839	chr2:75287839:A:G	rs6546961	A	G	A	SOX2_HMG_3	33	0	+	0	0	.
chr2	75456646	75456647	chr2:75456647:C:T	rs115284285	C	T	C	SOX2_HMG_3	15	1	+	3.732273882439371	6.57498303861623	ATCCAATGAAAGTGACG
chr2	75456662	75456663	chr2:75456663:A:C	rs7576567	A	C	C	SOX2_HMG_3	31	0	+	0	0	.
chr2	75475691	75475692	chr2:75475692:C:T	rs115058769	C	T	C	SOX2_HMG_3	22	0	+	0	0	.
chr2	75563715	75563716	chr2:75563716:G:A	rs13020202	G	A	G	SOX2_HMG_3	35	0	+	0	0	.
chr2	75603635	75603636	chr2:75603636:A:G	rs112030914	A	G	A	SOX2_HMG_3	10	1	+	3.4137538354678547	-3.4950009438473657	GAACAATGCTACTGTAA
chr2	75948005	75948006	chr2:75948006:G:A	rs17011958	G	A	A	SOX2_HMG_3	-9	0	-	0	0	.
chr2	76308347	76308348	chr2:76308348:A:C	rs6747727	A	C	A	SOX2_HMG_3	10	1	+	3.7278176830560676	-3.1809370962591528	TTTCAACTTCAGTGATA
chr2	76491637	76491638	chr2:76491638:T:C	rs10175679	T	C	T	SOX2_HMG_3	33	0	-	0	0	.
chr2	76491683	76491684	chr2:76491684:A:G	rs114787104	A	G	A	SOX2_HMG_3	-13	0	-	0	0	.
chr2	76598277	76598278	chr2:76598278:C:T	rs1850913	C	T	C	SOX2_HMG_3	-5	0	-	0	0	.
chr2	76599781	76599782	chr2:76599782:C:A	rs72810890	C	A	C	SOX2_HMG_3	-9	0	-	0	0	.
chr2	76641074	76641075	chr2:76641075:G:A	rs185006672	G	A	G	SOX2_HMG_3	3	1	-	4.489466673531481	-2.4192881057837385	GTACAATGCTATTGCTG
chr2	76641096	76641097	chr2:76641097:A:G	rs79944402	A	G	A	SOX2_HMG_3	-19	0	-	0	0	.
chr2	76789222	76789223	chr2:76789223:T:G	rs12988164	T	G	G	SOX2_HMG_3	-8	0	+	0	0	.
chr2	76793302	76793303	chr2:76793303:G:C	rs79498728	G	C	G	SOX2_HMG_3	-20	0	+	0	0	.
chr2	77008092	77008093	chr2:77008093:G:A	rs1446704	G	A	G	SOX2_HMG_3	-19	0	+	0	0	.
chr2	78925795	78925796	chr2:78925796:G:A	rs2861680	G	A	G	SOX2_HMG_3	-14	0	-	0	0	.
chr2	79005055	79005056	chr2:79005056:C:T	rs13031947	C	T	T	SOX2_HMG_3	1	1	-	4.528071129363271	6.3597187194425615	AGTTAATTCAATTGATT
chr2	79293200	79293201	chr2:79293201:C:T	rs1434170	C	T	C	SOX2_HMG_3	0	1	+	3.2086696757607727	3.0713406977121083	CATCAATGGTTTTGCAG
chr2	79293223	79293224	chr2:79293224:G:A	rs72818623	G	A	G	SOX2_HMG_3	23	0	+	0	0	.
chr2	79771690	79771691	chr2:79771691:G:A	rs72912717	G	A	A	SOX2_HMG_3	1	1	+	2.618589857358661	4.450237447437951	CGGTAATGCCAGTGATG
chr2	79980366	79980367	chr2:79980367:T:C	rs57637264	T	C	C	SOX2_HMG_3	-14	0	+	0	0	.
chr2	80313450	80313451	chr2:80313451:A:C	rs139283309	A	C	A	SOX2_HMG_3	-1	0	+	0	0	.
chr2	80313474	80313475	chr2:80313475:C:T	rs17018984	C	T	C	SOX2_HMG_3	23	0	+	0	0	.
chr2	80586970	80586971	chr2:80586971:C:T	rs12474308	C	T	C	SOX2_HMG_3	-1	0	+	0	0	.
chr2	81692840	81692841	chr2:81692841:C:T	rs7609125	C	T	C	SOX2_HMG_3	28	0	+	0	0	.
chr2	81903556	81903557	chr2:81903557:A:T	rs57068014	A	T	A	SOX2_HMG_3	15	1	-	1.587933936228648	0.3530314995119257	GCTCATTGCTACTGATG
chr2	82685695	82685696	chr2:82685696:C:T	rs113487444	C	T	C	SOX2_HMG_3	-10	0	+	0	0	.
chr2	82811824	82811825	chr2:82811825:A:C	rs185808058	A	C	A	SOX2_HMG_3	26	0	-	0	0	.
chr2	82880084	82880085	chr2:82880085:A:G	rs12470166	A	G	G	SOX2_HMG_3	12	1	-	4.845890986936061	-2.062863792379159	TAGGAATGCTAGTGATA
chr2	83007308	83007309	chr2:83007309:A:C	rs62146758	A	C	A	SOX2_HMG_3	2	1	-	15.33967733000039	11.472062495322346	TATCAATGAAATTGATG
chr2	83115973	83115974	chr2:83115974:A:G	rs115364265	A	G	A	SOX2_HMG_3	17	0	-	0	0	.
chr2	83116008	83116009	chr2:83116009:A:G	rs72838903	A	G	A	SOX2_HMG_3	-18	0	-	0	0	.
chr2	84127027	84127028	chr2:84127028:T:A	rs871721	T	A	T	SOX2_HMG_3	-9	0	-	0	0	.
chr2	84285972	84285973	chr2:84285973:A:C	chr2:84285973:A:C	A	C	A	SOX2_HMG_3	19	0	+	0	0	.
chr2	84716835	84716836	chr2:84716836:A:C	rs116551204	A	C	A	SOX2_HMG_3	14	1	+	2.7969227533962506	-4.035375952170442	GATTGATGGCATTGAAA
chr2	84828707	84828708	chr2:84828708:T:A	rs114984249	T	A	T	SOX2_HMG_3	26	0	+	0	0	.
chr2	84899650	84899651	chr2:84899651:G:C	rs6752806	G	C	.	SOX2_HMG_3	-12	0	-	0	0	.
chr2	85111209	85111210	chr2:85111210:A:C	rs79402360	A	C	A	SOX2_HMG_3	20	0	+	0	0	.
chr2	85165092	85165093	chr2:85165093:T:G	rs11691660	T	G	G	SOX2_HMG_3	-1	0	+	0	0	.
chr2	85193000	85193001	chr2:85193001:C:T	rs2568210	C	T	T	SOX2_HMG_3	26	0	-	0	0	.
chr2	85515173	85515174	chr2:85515174:A:G	rs2886722	A	G	A	SOX2_HMG_3	11	1	-	6.337549377580962	-0.35514212065138573	GGTCAATTCAATTGGGA
chr2	85668580	85668581	chr2:85668581:C:T	rs3024791	C	T	C	SOX2_HMG_3	-3	0	+	0	0	.
chr2	85685185	85685186	chr2:85685186:G:C	rs10169148	G	C	G	SOX2_HMG_3	13	1	+	2.2429495420553116	-4.665805237259909	GGGCAGTGGAAGTGATT
chr2	85693205	85693206	chr2:85693206:T:C	rs2886767	T	C	T	SOX2_HMG_3	-13	0	-	0	0	.
chr2	85850409	85850410	chr2:85850410:C:T	rs114993002	C	T	C	SOX2_HMG_3	-16	0	-	0	0	.
chr2	85916254	85916255	chr2:85916255:T:C	rs73943909	T	C	T	SOX2_HMG_3	19	0	+	0	0	.
chr2	86217931	86217932	chr2:86217932:G:T	rs112990545	G	T	G	SOX2_HMG_3	11	1	+	9.681651071540399	11.098731040760349	TTTCAATGAAAGTGAAG
chr2	87476707	87476708	chr2:87476708:A:G	rs72938975	A	G	G	SOX2_HMG_3	17	0	+	0	0	.
chr2	87680946	87680947	chr2:87680947:G:A	rs146472401	G	A	.	SOX2_HMG_3	22	0	-	0	0	.
chr2	88003758	88003759	chr2:88003759:G:A	rs4972158	G	A	G	SOX2_HMG_3	-4	0	-	0	0	.
chr2	88054810	88054811	chr2:88054811:T:C	rs11895559	T	C	T	SOX2_HMG_3	-7	0	-	0	0	.
chr2	88094951	88094952	chr2:88094952:G:A	rs2919885	G	A	G	SOX2_HMG_3	16	1	+	4.084918527417951	3.811230911027679	AATCAAGGGCTTTGATG
chr2	88096654	88096655	chr2:88096655:T:C	rs2919881	T	C	C	SOX2_HMG_3	-6	0	+	0	0	.
chr2	88147744	88147745	chr2:88147745:T:G	rs80324973	T	G	T	SOX2_HMG_3	10	1	-	4.905339189699937	-2.0034155896152828	CTGCAATGGCAGTGGTG
chr2	88216242	88216243	chr2:88216243:T:C	rs6547762	T	C	C	SOX2_HMG_3	-13	0	-	0	0	.
chr2	88628527	88628528	chr2:88628528:A:T	rs78137175	A	T	A	SOX2_HMG_3	-11	0	-	0	0	.
chr2	88754531	88754532	chr2:88754532:G:C	rs17037534	G	C	g	SOX2_HMG_3	-14	0	-	0	0	.
chr2	88755913	88755914	chr2:88755914:T:C	rs76045548	T	C	N	SOX2_HMG_3	-3	0	-	0	0	.
chr2	88821843	88821844	chr2:88821844:G:A	rs28493576	G	A	N	SOX2_HMG_3	13	1	+	3.408391509300154	-3.5003632700150664	TGTCAATCCCAGTGACA
chr2	88843378	88843379	chr2:88843379:A:G	rs2200334	A	G	a	SOX2_HMG_3	15	1	-	9.846572348162486	7.0038631919856265	AAACAATAATAGTGATG
chr2	89783084	89783085	chr2:89783085:T:C	rs951405152	T	C	.	SOX2_HMG_3	-18	0	-	0	0	.
chr2	89797454	89797455	chr2:89797455:C:T	rs927375809	C	T	.	SOX2_HMG_3	33	0	-	0	0	.
chr2	89840444	89840445	chr2:89840445:A:G	rs796676857	A	G	.	SOX2_HMG_3	22	0	+	0	0	.
chr2	89849148	89849149	chr2:89849149:A:G	rs377010215	A	G	.	SOX2_HMG_3	6	1	-	8.79124024456645	1.88248546525123	GATCCATGTAATTGAAA
chr2	90381580	90381581	chr2:90381581:T:A	rs13396470	T	A	.	SOX2_HMG_3	27	0	+	0	0	.
chr2	90382578	90382579	chr2:90382579:A:C	rs6709827	A	C	.	SOX2_HMG_3	33	0	-	0	0	.
chr2	90386083	90386084	chr2:90386084:C:A	rs78626035	C	A	.	SOX2_HMG_3	-9	0	-	0	0	.
chr2	90386094	90386095	chr2:90386095:G:A	rs508068	G	A	.	SOX2_HMG_3	-20	0	-	0	0	.
chr2	90389893	90389894	chr2:90389894:T:A	rs7424330	T	A	.	SOX2_HMG_3	18	0	-	0	0	.
chr2	90390154	90390155	chr2:90390155:C:A	rs59876081	C	A	.	SOX2_HMG_3	-4	0	+	0	0	.
chr2	90392428	90392429	chr2:90392429:C:A	rs7370785	C	A	.	SOX2_HMG_3	-9	0	-	0	0	.
chr2	91917757	91917758	chr2:91917758:A:G	rs1034603191	A	G	a	SOX2_HMG_3	-9	0	-	0	0	.
chr2	94839318	94839319	chr2:94839319:G:A	rs7588397	G	A	-	SOX2_HMG_3	-11	0	+	0	0	.
chr2	95034518	95034519	chr2:95034519:A:G	chr2:95034519:A:G	A	G	A	SOX2_HMG_3	-10	0	+	0	0	.
chr2	96515985	96515986	chr2:96515986:C:A	rs116477098	C	A	C	SOX2_HMG_3	-15	0	-	0	0	.
chr2	97591466	97591467	chr2:97591467:T:C	rs56226039	T	C	t	SOX2_HMG_3	-12	0	-	0	0	.
chr2	97803070	97803071	chr2:97803071:G:A	rs718159	G	A	G	SOX2_HMG_3	24	0	+	0	0	.
chr2	98028417	98028418	chr2:98028418:C:A	rs142038621	C	A	C	SOX2_HMG_3	32	0	-	0	0	.
chr2	98268616	98268617	chr2:98268617:A:G	chr2:98268617:A:G	A	G	a	SOX2_HMG_3	22	0	-	0	0	.
chr2	98357231	98357232	chr2:98357232:A:G	rs4851127	A	G	G	SOX2_HMG_3	-16	0	+	0	0	.
chr2	98357283	98357284	chr2:98357284:G:A	rs4851128	G	A	A	SOX2_HMG_3	36	0	+	0	0	.
chr2	98360314	98360315	chr2:98360315:C:T	rs12475597	C	T	C	SOX2_HMG_3	-1	0	+	0	0	.
chr2	98360315	98360316	chr2:98360316:A:T	rs12463616	A	T	A	SOX2_HMG_3	0	1	+	3.4887481776680724	2.826946576993379	ATGCAATGGCAGTGGGA
chr2	98654547	98654548	chr2:98654548:C:T	rs2309433	C	T	C	SOX2_HMG_3	8	1	-	5.646181430063397	4.7971374826997675	AGTAAATGGCATTGTTT
chr2	99142414	99142415	chr2:99142415:T:C	rs750303200	T	C	T	SOX2_HMG_3	-15	0	+	0	0	.
chr2	99351283	99351284	chr2:99351284:T:C	rs72956312	T	C	T	SOX2_HMG_3	27	0	+	0	0	.
chr2	99390112	99390113	chr2:99390113:A:T	chr2:99390113:A:T	A	T	A	SOX2_HMG_3	23	0	+	0	0	.
chr2	99662664	99662665	chr2:99662665:T:G	rs1524366	T	G	T	SOX2_HMG_3	22	0	-	0	0	.
chr2	100158582	100158583	chr2:100158583:T:C	rs4851256	T	C	t	SOX2_HMG_3	20	0	-	0	0	.
chr2	100173444	100173445	chr2:100173445:T:C	rs7593261	T	C	C	SOX2_HMG_3	19	0	-	0	0	.
chr2	100322870	100322871	chr2:100322871:G:A	rs12999151	G	A	A	SOX2_HMG_3	-2	0	+	0	0	.
chr2	100667085	100667086	chr2:100667086:T:C	rs4851359	T	C	C	SOX2_HMG_3	14	1	+	2.604097104923418	-1.5154277558289815	AGTCTATGGTAGTGTAC
chr2	100804100	100804101	chr2:100804101:C:T	rs7598317	C	T	T	SOX2_HMG_3	5	1	+	3.6022452900845527	3.6022452900845527	TGTCACTTCTAGTGAAA
chr2	101139873	101139874	chr2:101139874:G:A	rs114493084	G	A	G	SOX2_HMG_3	3	1	-	7.251015410731762	0.3422606314165409	TATCAATGGTGGTGAGT
chr2	101234382	101234383	chr2:101234383:C:T	rs1192801	C	T	T	SOX2_HMG_3	20	0	-	0	0	.
chr2	101474728	101474729	chr2:101474729:A:C	chr2:101474729:A:C	A	C	A	SOX2_HMG_3	0	1	-	7.0386325861918575	7.921028465951845	TATCAATATTTTTGAAA
chr2	101615164	101615165	chr2:101615165:T:C	rs4850984	T	C	C	SOX2_HMG_3	-13	0	+	0	0	.
chr2	101752407	101752408	chr2:101752408:A:G	rs141129206	A	G	A	SOX2_HMG_3	17	0	-	0	0	.
chr2	102080591	102080592	chr2:102080592:C:T	rs4850996	C	T	T	SOX2_HMG_3	28	0	+	0	0	.
chr2	102155554	102155555	chr2:102155555:C:T	rs148845730	C	T	C	SOX2_HMG_3	7	1	-	4.402514070167474	1.6737269496061389	GACCAATGGGAGTGAGG
chr2	102479976	102479977	chr2:102479977:C:A	rs6543145	C	A	C	SOX2_HMG_3	-4	0	+	0	0	.
chr2	102588269	102588270	chr2:102588270:C:A	rs7588111	C	A	C	SOX2_HMG_3	-11	0	+	0	0	.
chr2	103138853	103138854	chr2:103138854:G:A	rs13399720	G	A	G	SOX2_HMG_3	-12	0	-	0	0	.
chr2	103852752	103852753	chr2:103852753:T:A	rs2678669	T	A	T	SOX2_HMG_3	28	0	+	0	0	.
chr2	103869034	103869035	chr2:103869035:G:A	rs55733286	G	A	G	SOX2_HMG_3	1	1	+	2.808382476646429	4.640030066725721	CGTCAATGGCATTCTCA
chr2	103873002	103873003	chr2:103873003:T:C	rs191790900	T	C	T	SOX2_HMG_3	5	1	-	5.3392467404340405	-1.5695080388811788	ATTCTATGGTAGTGAAT
chr2	103975178	103975179	chr2:103975179:G:A	rs111699028	G	A	G	SOX2_HMG_3	-15	0	-	0	0	.
chr2	104111427	104111428	chr2:104111428:G:C	rs67772867	G	C	G	SOX2_HMG_3	13	1	+	4.609253087484034	-2.299501691831186	ATTCAATGTCATAGTTT
chr2	104428334	104428335	chr2:104428335:A:T	rs12151553	A	T	A	SOX2_HMG_3	-9	0	+	0	0	.
chr2	104637355	104637356	chr2:104637356:A:C	rs6543262	A	C	C	SOX2_HMG_3	5	1	+	8.683027043326259	1.7742722640110378	CATCAAAGCAATTGATG
chr2	105048836	105048837	chr2:105048837:T:C	rs12611887	T	C	C	SOX2_HMG_3	28	0	-	0	0	.
chr2	105080344	105080345	chr2:105080345:A:G	rs12612214	A	G	G	SOX2_HMG_3	17	0	+	0	0	.
chr2	105183334	105183335	chr2:105183335:T:C	rs2679850	T	C	C	SOX2_HMG_3	-13	0	+	0	0	.
chr2	105443445	105443446	chr2:105443446:T:C	rs13025654	T	C	T	SOX2_HMG_3	33	0	+	0	0	.
chr2	105546808	105546809	chr2:105546809:G:A	rs144831616	G	A	G	SOX2_HMG_3	32	0	-	0	0	.
chr2	105546838	105546839	chr2:105546839:C:T	rs10180130	C	T	C	SOX2_HMG_3	2	1	-	7.611463817926023	7.611463817926023	TGGCAATGATAGTGAGT
chr2	105580204	105580205	chr2:105580205:T:C	rs4851809	T	C	C	SOX2_HMG_3	19	0	-	0	0	.
chr2	105698155	105698156	chr2:105698156:A:T	rs1451714	A	T	A	SOX2_HMG_3	6	1	-	6.9947800311005786	0.08602525178535803	AATTAATGTAAGTGAGG
chr2	105721857	105721858	chr2:105721858:C:T	rs4851087	C	T	T	SOX2_HMG_3	18	0	-	0	0	.
chr2	105756711	105756712	chr2:105756712:T:C	rs13028719	T	C	T	SOX2_HMG_3	11	1	+	3.1323525438282442	-3.5603389544041026	TATTGATGTTATTGAAG
chr2	105766062	105766063	chr2:105766063:C:A	rs11693509	C	A	A	SOX2_HMG_3	7	1	-	2.714198361981337	0.6694878572477998	TAGCAATGTCAGGGAGT
chr2	105766072	105766073	chr2:105766073:A:G	rs11676842	A	G	G	SOX2_HMG_3	-3	0	-	0	0	.
chr2	105790365	105790366	chr2:105790366:A:G	rs572820442	A	G	A	SOX2_HMG_3	12	1	-	2.2175900116803984	-4.691164767634821	AGCCTATGGCATTGAGA
chr2	105790394	105790395	chr2:105790395:T:C	rs114915500	T	C	C	SOX2_HMG_3	-17	0	-	0	0	.
chr2	106561007	106561008	chr2:106561008:A:G	rs59005995	A	G	a	SOX2_HMG_3	29	0	+	0	0	.
chr2	106812749	106812750	chr2:106812750:T:C	rs75012206	T	C	C	SOX2_HMG_3	-15	0	+	0	0	.
chr2	106839401	106839402	chr2:106839402:T:C	rs67385458	T	C	T	SOX2_HMG_3	33	0	-	0	0	.
chr2	107082462	107082463	chr2:107082463:A:G	rs560217411	A	G	A	SOX2_HMG_3	5	1	+	5.599061229256328	-1.309693550058892	GCTCAATTTTATAGAAA
chr2	107281737	107281738	chr2:107281738:C:G	rs7578096	C	G	C	SOX2_HMG_3	-2	0	+	0	0	.
chr2	107512119	107512120	chr2:107512120:T:C	rs266259	T	C	C	SOX2_HMG_3	-4	0	+	0	0	.
chr2	107577351	107577352	chr2:107577352:C:A	rs7562778	C	A	C	SOX2_HMG_3	-19	0	-	0	0	.
chr2	107779607	107779608	chr2:107779608:A:G	chr2:107779608:A:G	A	G	A	SOX2_HMG_3	-11	0	+	0	0	.
chr2	108184739	108184740	chr2:108184740:G:A	rs860588	G	A	A	SOX2_HMG_3	11	1	+	4.666906592281888	-0.6087049367305084	ACTCAATTTTAGTAATT
chr2	108423561	108423562	chr2:108423562:G:A	rs111656651	G	A	G	SOX2_HMG_3	29	0	+	0	0	.
chr2	108449797	108449798	chr2:108449798:C:T	rs111776505	C	T	C	SOX2_HMG_3	-14	0	+	0	0	.
chr2	108449809	108449810	chr2:108449810:G:T	rs78477242	G	T	G	SOX2_HMG_3	-2	0	+	0	0	.
chr2	108449831	108449832	chr2:108449832:A:G	rs2460945	A	G	G	SOX2_HMG_3	20	0	+	0	0	.
chr2	108536472	108536473	chr2:108536473:T:C	rs13394465	T	C	T	SOX2_HMG_3	2	1	+	2.106139087916975	-2.8972329823986107	GCTCCATGGTATGGATG
chr2	109032258	109032259	chr2:109032259:G:A	rs4676051	G	A	A	SOX2_HMG_3	25	0	+	0	0	.
chr2	109132846	109132847	chr2:109132847:G:A	rs6740122	G	A	A	SOX2_HMG_3	-11	0	-	0	0	.
chr2	109236424	109236425	chr2:109236425:T:C	rs35234904	T	C	T	SOX2_HMG_3	-2	0	-	0	0	.
chr2	109380429	109380430	chr2:109380430:T:G	rs112507081	T	G	T	SOX2_HMG_3	11	1	+	5.541177654389106	4.124097685169156	GTGCAATGTTATTGGGT
chr2	109451534	109451535	chr2:109451535:T:G	rs551558452	T	G	T	SOX2_HMG_3	-19	0	-	0	0	.
chr2	109644441	109644442	chr2:109644442:G:T	rs62151702	G	T	G	SOX2_HMG_3	7	1	+	8.529290643364847	6.484580138631312	TTCCAATGGTATTGAAA
chr2	109644447	109644448	chr2:109644448:G:A	rs56840594	G	A	G	SOX2_HMG_3	13	1	+	8.529290643364847	1.6205358640496277	TTCCAATGGTATTGAAA
chr2	109671420	109671421	chr2:109671421:C:T	rs35256433	C	T	C	SOX2_HMG_3	32	0	+	0	0	.
chr2	109700832	109700833	chr2:109700833:A:G	rs4953768	A	G	.	SOX2_HMG_3	5	1	+	3.882713582500702	-3.02604119681452	AGTCAATGTCATTAGAG
chr2	110170254	110170255	chr2:110170255:C:A	rs566264005	C	A	C	SOX2_HMG_3	-18	0	-	0	0	.
chr2	110874989	110874990	chr2:110874990:C:T	rs10165663	C	T	T	SOX2_HMG_3	-15	0	-	0	0	.
chr2	110882168	110882169	chr2:110882169:T:C	rs116558838	T	C	T	SOX2_HMG_3	24	0	+	0	0	.
chr2	110883725	110883726	chr2:110883726:G:A	rs10186144	G	A	A	SOX2_HMG_3	30	0	-	0	0	.
chr2	111020986	111020987	chr2:111020987:C:T	rs10200225	C	T	T	SOX2_HMG_3	-2	0	-	0	0	.
chr2	111024433	111024434	chr2:111024434:C:T	rs57698963	C	T	C	SOX2_HMG_3	23	0	+	0	0	.
chr2	111072440	111072441	chr2:111072441:G:A	rs1837370	G	A	G	SOX2_HMG_3	-2	0	-	0	0	.
chr2	111250138	111250139	chr2:111250139:A:G	rs6727266	A	G	G	SOX2_HMG_3	11	1	-	7.860038180068321	1.1673466818359732	CATTAATTTTATTGAAA
chr2	111512620	111512621	chr2:111512621:T:C	rs11686057	T	C	T	SOX2_HMG_3	4	1	+	4.1716396282877914	4.1716396282877914	AAACTATGCCAGTGATT
chr2	111608281	111608282	chr2:111608282:T:C	rs375642853	T	C	T	SOX2_HMG_3	29	0	-	0	0	.
chr2	111654478	111654479	chr2:111654479:A:G	rs77325393	A	G	A	SOX2_HMG_3	26	0	-	0	0	.
chr2	111660237	111660238	chr2:111660238:C:A	rs4848136	C	A	C	SOX2_HMG_3	17	0	-	0	0	.
chr2	111735882	111735883	chr2:111735883:C:T	rs78775541	C	T	C	SOX2_HMG_3	-18	0	+	0	0	.
chr2	112643193	112643194	chr2:112643194:C:T	rs6705236	C	T	C	SOX2_HMG_3	35	0	+	0	0	.
chr2	112733373	112733374	chr2:112733374:G:A	rs10187872	G	A	G	SOX2_HMG_3	-11	0	-	0	0	.
chr2	112777860	112777861	chr2:112777861:C:T	rs2071375	C	T	C	SOX2_HMG_3	21	0	+	0	0	.
chr2	112782599	112782600	chr2:112782600:C:T	rs1894399	C	T	C	SOX2_HMG_3	-15	0	+	0	0	.
chr2	112782627	112782628	chr2:112782628:G:T	rs1609682	G	T	T	SOX2_HMG_3	13	1	+	3.969039048714119	-2.9397157306011015	AAACAAAAGTATTGAAG
chr2	112839162	112839163	chr2:112839163:C:T	rs80238779	C	T	C	SOX2_HMG_3	-8	0	+	0	0	.
chr2	113005997	113005998	chr2:113005998:A:G	rs895497	A	G	G	SOX2_HMG_3	-17	0	-	0	0	.
chr2	113029778	113029779	chr2:113029779:G:C	rs4849143	G	C	c	SOX2_HMG_3	9	1	-	2.260802301769708	-3.3718779353933432	GATCTTTTGCATTGATG
chr2	113082771	113082772	chr2:113082772:A:G	rs72827886	A	G	A	SOX2_HMG_3	-7	0	+	0	0	.
chr2	113164518	113164519	chr2:113164519:G:T	rs181518989	G	T	G	SOX2_HMG_3	21	0	+	0	0	.
chr2	113351801	113351802	chr2:113351802:C:T	rs1867866	C	T	.	SOX2_HMG_3	27	0	-	0	0	.
chr2	113390022	113390023	chr2:113390023:G:A	rs6749684	G	A	.	SOX2_HMG_3	19	0	+	0	0	.
chr2	113826912	113826913	chr2:113826913:C:T	rs72948684	C	T	T	SOX2_HMG_3	-20	0	+	0	0	.
chr2	113847576	113847577	chr2:113847577:T:C	rs4849293	T	C	T	SOX2_HMG_3	6	1	+	8.353301163084723	1.4445463837695018	AATCATTGCTATTGTTG
chr2	115034842	115034843	chr2:115034843:C:T	rs17043916	C	T	C	SOX2_HMG_3	-6	0	-	0	0	.
chr2	115722972	115722973	chr2:115722973:C:T	rs72828542	C	T	C	SOX2_HMG_3	19	0	-	0	0	.
chr2	116238592	116238593	chr2:116238593:C:A	rs76721394	C	A	c	SOX2_HMG_3	3	1	-	4.096341598097643	4.096341598097643	ATTGAATACTATTGAAG
chr2	116238653	116238654	chr2:116238654:A:G	rs34267752	A	G	A	SOX2_HMG_3	-5	0	-	0	0	.
chr2	116924585	116924586	chr2:116924586:A:T	rs10211369	A	T	A	SOX2_HMG_3	34	0	-	0	0	.
chr2	117056347	117056348	chr2:117056348:C:A	rs12711867	C	A	C	SOX2_HMG_3	22	0	-	0	0	.
chr2	117431415	117431416	chr2:117431416:A:C	chr2:117431416:A:C	A	C	A	SOX2_HMG_3	34	0	+	0	0	.
chr2	117727017	117727018	chr2:117727018:C:T	rs17498503	C	T	C	SOX2_HMG_3	13	1	-	6.884829428472987	-0.023925350842234794	TATCAATGCCATCGTTG
chr2	117731662	117731663	chr2:117731663:C:T	rs36000774	C	T	C	SOX2_HMG_3	-8	0	+	0	0	.
chr2	117812696	117812697	chr2:117812697:G:A	rs17567144	G	A	G	SOX2_HMG_3	23	0	-	0	0	.
chr2	118080704	118080705	chr2:118080705:A:G	rs2161830	A	G	T	SOX2_HMG_3	-5	0	+	0	0	.
chr2	118256149	118256150	chr2:118256150:C:G	rs115174928	C	G	C	SOX2_HMG_3	-17	0	-	0	0	.
chr2	118311355	118311356	chr2:118311356:A:G	rs12473187	A	G	A	SOX2_HMG_3	6	1	-	4.35116953436687	-2.55758524494835	AGTCAATAGGAGTGAGA
chr2	118490412	118490413	chr2:118490413:C:G	rs11686428	C	G	-	SOX2_HMG_3	-10	0	+	0	0	.
chr2	118729182	118729183	chr2:118729183:A:G	rs332702	A	G	G	SOX2_HMG_3	0	1	-	6.53465293865212	6.671981916700783	TGTCATTGCTATTGAAT
chr2	118842448	118842449	chr2:118842449:C:T	rs184945714	C	T	C	SOX2_HMG_3	3	1	+	4.768424471584508	-2.1403303077307125	AAGCAATGACATTCAAA
chr2	118842779	118842780	chr2:118842780:C:A	rs61734176	C	A	C	SOX2_HMG_3	10	1	-	3.15737116059051	3.15737116059051	GGACAATGACGTTGAAA
chr2	118980548	118980549	chr2:118980549:T:A	rs1371565	T	A	A	SOX2_HMG_3	1	1	-	3.7688570976010967	0.7628132450777814	AATCTATGATTTTGATA
chr2	119119391	119119392	chr2:119119392:G:A	rs77990273	G	A	G	SOX2_HMG_3	-17	0	+	0	0	.
chr2	119269609	119269610	chr2:119269610:T:A	rs6730921	T	A	A	SOX2_HMG_3	22	0	+	0	0	.
chr2	119759960	119759961	chr2:119759961:C:T	rs1018960585	C	T	C	SOX2_HMG_3	30	0	-	0	0	.
chr2	119760001	119760002	chr2:119760002:C:T	rs867439834	C	T	C	SOX2_HMG_3	-11	0	-	0	0	.
chr2	120265163	120265164	chr2:120265164:G:T	rs7587975	G	T	T	SOX2_HMG_3	11	1	+	9.23935691542458	10.65643688464453	AAGCAATGTCAGTGTTT
chr2	120361344	120361345	chr2:120361345:A:C	rs1548039	A	C	C	SOX2_HMG_3	32	0	-	0	0	.
chr2	122868347	122868348	chr2:122868348:A:T	rs17008792	A	T	A	SOX2_HMG_3	-1	0	+	0	0	.
chr2	123074652	123074653	chr2:123074653:C:A	rs1515166	C	A	A	SOX2_HMG_3	11	1	-	2.6498413130068883	4.066921282226837	GTGCAATGGCAGAGATA
chr2	123596849	123596850	chr2:123596850:T:C	rs4848872	T	C	C	SOX2_HMG_3	30	0	-	0	0	.
chr2	124404213	124404214	chr2:124404214:C:T	rs79611938	C	T	C	SOX2_HMG_3	-10	0	+	0	0	.
chr2	124574999	124575000	chr2:124575000:G:A	rs17011734	G	A	G	SOX2_HMG_3	11	1	+	2.435323047243177	-2.840288481769221	AATCAATGGGCGTGAAA
chr2	124600544	124600545	chr2:124600545:C:T	rs7558706	C	T	C	SOX2_HMG_3	32	0	+	0	0	.
chr2	124807245	124807246	chr2:124807246:G:T	rs314718	G	T	T	SOX2_HMG_3	30	0	+	0	0	.
chr2	125640919	125640920	chr2:125640920:A:T	rs35806075	A	T	A	SOX2_HMG_3	30	0	-	0	0	.
chr2	125717153	125717154	chr2:125717154:T:C	rs13034852	T	C	T	SOX2_HMG_3	2	1	-	3.178350770563612	3.178350770563612	GAAAAATGGAATTGACA
chr2	126369644	126369645	chr2:126369645:A:G	rs17013755	A	G	A	SOX2_HMG_3	12	1	-	3.841986138247531	-3.0667686410676884	GAACAATGCCAATGTTA
chr2	126647935	126647936	chr2:126647936:G:A	rs969684146	G	A	G	SOX2_HMG_3	-9	0	+	0	0	.
chr2	126747753	126747754	chr2:126747754:T:C	rs17014351	T	C	T	SOX2_HMG_3	-14	0	-	0	0	.
chr2	126801126	126801127	chr2:126801127:C:T	rs6431180	C	T	C	SOX2_HMG_3	19	0	+	0	0	.
chr2	127083760	127083761	chr2:127083761:T:C	rs13426725	T	C	T	SOX2_HMG_3	22	0	+	0	0	.
chr2	127116667	127116668	chr2:127116668:G:A	rs10198772	G	A	G	SOX2_HMG_3	-12	0	+	0	0	.
chr2	127404655	127404656	chr2:127404656:A:G	rs186084038	A	G	A	SOX2_HMG_3	-13	0	+	0	0	.
chr2	127634971	127634972	chr2:127634972:A:C	rs4662750	A	C	C	SOX2_HMG_3	6	1	-	7.222506293388456	0.3137515140732352	CTTCAATATTAGTGTAG
chr2	127858539	127858540	chr2:127858540:G:A	chr2:127858540:G:A	G	A	G	SOX2_HMG_3	31	0	+	0	0	.
chr2	128410682	128410683	chr2:128410683:C:T	rs10205190	C	T	C	SOX2_HMG_3	30	0	+	0	0	.
chr2	128426591	128426592	chr2:128426592:G:A	rs2124432	G	A	A	SOX2_HMG_3	21	0	-	0	0	.
chr2	128439235	128439236	chr2:128439236:C:T	rs11900177	C	T	T	SOX2_HMG_3	-3	0	+	0	0	.
chr2	128439264	128439265	chr2:128439265:T:C	rs74607594	T	C	T	SOX2_HMG_3	26	0	+	0	0	.
chr2	128464611	128464612	chr2:128464612:T:C	rs113773226	T	C	T	SOX2_HMG_3	16	1	-	6.621157704109704	6.894845320499975	AGTCAATGCCAGTGGCA
chr2	128512118	128512119	chr2:128512119:T:C	rs841089	T	C	C	SOX2_HMG_3	33	0	+	0	0	.
chr2	128513999	128514000	chr2:128514000:T:C	rs60991447	T	C	T	SOX2_HMG_3	8	1	-	3.358808169426431	4.20785211679006	GATCCATAATAGTGAGC
chr2	128517026	128517027	chr2:128517027:G:A	rs11683275	G	A	A	SOX2_HMG_3	35	0	+	0	0	.
chr2	128576853	128576854	chr2:128576854:A:G	rs77944833	A	G	A	SOX2_HMG_3	-6	0	-	0	0	.
chr2	128752662	128752663	chr2:128752663:T:C	rs1316511	T	C	T	SOX2_HMG_3	-1	0	-	0	0	.
chr2	128782518	128782519	chr2:128782519:T:C	rs7425326	T	C	C	SOX2_HMG_3	-6	0	+	0	0	.
chr2	128834197	128834198	chr2:128834198:G:A	rs6431034	G	A	A	SOX2_HMG_3	18	0	-	0	0	.
chr2	129170828	129170829	chr2:129170829:A:G	rs2707810	A	G	G	SOX2_HMG_3	-3	0	+	0	0	.
chr2	129469514	129469515	chr2:129469515:G:A	rs749696102	G	A	G	SOX2_HMG_3	3	1	-	3.8991969715507877	-3.009557807764432	TATCTATAGAAGTGAAG
chr2	129481694	129481695	chr2:129481695:T:C	rs62157324	T	C	T	SOX2_HMG_3	2	1	-	4.207258817486768	4.207258817486768	TCACAATGGTAATGATA
chr2	129672659	129672660	chr2:129672660:C:T	rs3109277	C	T	C	SOX2_HMG_3	23	0	-	0	0	.
chr2	129885004	129885005	chr2:129885005:T:G	rs10928936	T	G	G	SOX2_HMG_3	-11	0	-	0	0	.
chr2	130148793	130148794	chr2:130148794:A:G	rs35796566	A	G	.	SOX2_HMG_3	-1	0	+	0	0	.
chr2	130166959	130166960	chr2:130166960:G:A	rs28404396	G	A	.	SOX2_HMG_3	-2	0	+	0	0	.
chr2	130166972	130166973	chr2:130166973:T:A	rs28473698	T	A	.	SOX2_HMG_3	11	1	+	8.385254300026793	1.692562801794445	CATCAATGACATTCAAG
chr2	130293901	130293902	chr2:130293902:T:G	rs938867	T	G	G	SOX2_HMG_3	20	0	-	0	0	.
chr2	130386724	130386725	chr2:130386725:C:T	rs112503542	C	T	.	SOX2_HMG_3	36	0	+	0	0	.
chr2	130818647	130818648	chr2:130818648:G:A	rs6749628	G	A	G	SOX2_HMG_3	35	0	-	0	0	.
chr2	131714054	131714055	chr2:131714055:C:T	rs4100612	C	T	.	SOX2_HMG_3	-10	0	+	0	0	.
chr2	131836638	131836639	chr2:131836639:A:T	rs12471911	A	T	a	SOX2_HMG_3	24	0	+	0	0	.
chr2	132034984	132034985	chr2:132034985:T:C	rs13026350	T	C	-	SOX2_HMG_3	1	1	+	4.389619283730761	4.389619283730761	ATTTAATTTCAGTGATA
chr2	133139720	133139721	chr2:133139721:C:T	rs1434227	C	T	T	SOX2_HMG_3	13	1	-	7.060173371881971	0.15141859256675005	AATGAATGACAGTGAGG
chr2	133334592	133334593	chr2:133334593:A:C	chr2:133334593:A:C	A	C	A	SOX2_HMG_3	12	1	-	1.939911454889579	-4.968843324425642	GGTCAAAGGTAGTGCTG
chr2	133652958	133652959	chr2:133652959:A:G	rs7586760	A	G	G	SOX2_HMG_3	8	1	+	5.296842350418311	6.14588629778194	AATCAATAATAGGGAAA
chr2	133675455	133675456	chr2:133675456:G:A	rs573783785	G	A	G	SOX2_HMG_3	28	0	-	0	0	.
chr2	133780833	133780834	chr2:133780834:C:T	rs10184576	C	T	T	SOX2_HMG_3	3	1	+	3.1731554986546144	-3.735599280660606	TGGCAATGATAGTAATG
chr2	133805904	133805905	chr2:133805905:C:T	rs16829491	C	T	C	SOX2_HMG_3	-19	0	+	0	0	.
chr2	133850108	133850109	chr2:133850109:A:G	rs1900346	A	G	g	SOX2_HMG_3	7	1	+	4.0742521704070125	6.803039290968348	GGTCAATACTAGTAAAG
chr2	134073546	134073547	chr2:134073547:C:A	rs1257370	C	A	A	SOX2_HMG_3	29	0	+	0	0	.
chr2	134499363	134499364	chr2:134499364:A:G	rs17787563	A	G	G	SOX2_HMG_3	-15	0	-	0	0	.
chr2	135037872	135037873	chr2:135037873:C:T	rs10167901	C	T	C	SOX2_HMG_3	-10	0	+	0	0	.
chr2	135964032	135964033	chr2:135964033:A:G	rs12615624	A	G	G	SOX2_HMG_3	-16	0	-	0	0	.
chr2	136236347	136236348	chr2:136236348:A:G	rs10183863	A	G	G	SOX2_HMG_3	25	0	-	0	0	.
chr2	136297810	136297811	chr2:136297811:T:C	rs4325815	T	C	T	SOX2_HMG_3	-2	0	-	0	0	.
chr2	137023479	137023480	chr2:137023480:A:T	rs13411176	A	T	A	SOX2_HMG_3	-17	0	+	0	0	.
chr2	137208883	137208884	chr2:137208884:G:A	rs13404985	G	A	A	SOX2_HMG_3	-4	0	-	0	0	.
chr2	137208893	137208894	chr2:137208894:T:C	rs13396104	T	C	T	SOX2_HMG_3	-14	0	-	0	0	.
chr2	137554614	137554615	chr2:137554615:A:G	rs7604024	A	G	G	SOX2_HMG_3	5	1	+	2.318918276016457	-4.589836503298763	TCCCAATGTGAGTGATG
chr2	137921817	137921818	chr2:137921818:T:C	rs6753975	T	C	C	SOX2_HMG_3	35	0	-	0	0	.
chr2	138087380	138087381	chr2:138087381:A:G	rs10928646	A	G	A	SOX2_HMG_3	-15	0	-	0	0	.
chr2	138425642	138425643	chr2:138425643:C:G	rs75529043	C	G	C	SOX2_HMG_3	35	0	-	0	0	.
chr2	138448282	138448283	chr2:138448283:C:T	rs4560178	C	T	C	SOX2_HMG_3	-4	0	-	0	0	.
chr2	139864504	139864505	chr2:139864505:A:T	rs116703266	A	T	A	SOX2_HMG_3	34	0	-	0	0	.
chr2	139985608	139985609	chr2:139985609:C:A	rs115150591	C	A	C	SOX2_HMG_3	-18	0	-	0	0	.
chr2	140156608	140156609	chr2:140156609:A:T	rs2950614	A	T	A	SOX2_HMG_3	21	0	+	0	0	.
chr2	140210738	140210739	chr2:140210739:T:C	rs1008695	T	C	T	SOX2_HMG_3	7	1	-	4.3396470161863965	7.068434136747732	AAGCAATAGCAATGATA
chr2	140270356	140270357	chr2:140270357:A:G	rs3748865	A	G	A	SOX2_HMG_3	-11	0	+	0	0	.
chr2	140442082	140442083	chr2:140442083:A:T	rs1878742	A	T	T	SOX2_HMG_3	33	0	-	0	0	.
chr2	140539572	140539573	chr2:140539573:A:T	rs13414650	A	T	A	SOX2_HMG_3	33	0	+	0	0	.
chr2	140540897	140540898	chr2:140540898:A:C	rs6729619	A	C	A	SOX2_HMG_3	-4	0	+	0	0	.
chr2	141322054	141322055	chr2:141322055:A:T	rs111739657	A	T	A	SOX2_HMG_3	14	1	-	8.360743046476143	11.073516891290437	AATCAATGTCACTGTTA
chr2	141330623	141330624	chr2:141330624:G:T	rs111464452	G	T	G	SOX2_HMG_3	7	1	+	8.899012065304042	6.854301560570507	AAGCAATGTAATTGTAA
chr2	141595332	141595333	chr2:141595333:G:A	rs72855461	G	A	G	SOX2_HMG_3	7	1	+	9.973122902965974	7.244335782404638	AGTCAATGTAATTGTGT
chr2	141689030	141689031	chr2:141689031:A:G	rs76156493	A	G	A	SOX2_HMG_3	5	1	+	5.045588150480208	-1.8631666288350126	TATCAATTAAAGTGCTG
chr2	141728831	141728832	chr2:141728832:A:G	rs2164694	A	G	A	SOX2_HMG_3	-7	0	-	0	0	.
chr2	141887565	141887566	chr2:141887566:A:G	rs13429414	A	G	A	SOX2_HMG_3	5	1	+	8.85425115454678	1.9454963752315597	AAACAATTAAATTGAAG
chr2	142980549	142980550	chr2:142980550:G:A	rs62169913	G	A	G	SOX2_HMG_3	-7	0	+	0	0	.
chr2	143060148	143060149	chr2:143060149:T:C	rs354690	T	C	T	SOX2_HMG_3	6	1	+	2.8868056495015963	-4.021949129813624	CATCCATGATAGTGGGA
chr2	143212279	143212280	chr2:143212280:G:A	rs4662316	G	A	G	SOX2_HMG_3	19	0	-	0	0	.
chr2	143501973	143501974	chr2:143501974:G:A	rs6760183	G	A	G	SOX2_HMG_3	-1	0	-	0	0	.
chr2	143511835	143511836	chr2:143511836:C:A	rs12691681	C	A	A	SOX2_HMG_3	-15	0	+	0	0	.
chr2	143668447	143668448	chr2:143668448:G:A	rs555185210	G	A	G	SOX2_HMG_3	1	1	+	3.9825902590948674	5.814237849174159	CGTCAATTGTGGTGATC
chr2	144180270	144180271	chr2:144180271:G:T	rs79034922	G	T	G	SOX2_HMG_3	17	0	+	0	0	.
chr2	144461688	144461689	chr2:144461689:G:A	rs17677410	G	A	G	SOX2_HMG_3	3	1	-	4.746489756261716	-2.1622650230535037	TATCGATGGAAGTGACA
chr2	145386715	145386716	chr2:145386716:G:A	rs13383375	G	A	G	SOX2_HMG_3	-14	0	+	0	0	.
chr2	146244829	146244830	chr2:146244830:C:A	rs2194682	C	A	C	SOX2_HMG_3	28	0	-	0	0	.
chr2	146731080	146731081	chr2:146731081:G:A	rs57003031	G	A	G	SOX2_HMG_3	22	0	-	0	0	.
chr2	146731118	146731119	chr2:146731119:A:G	rs150885889	A	G	A	SOX2_HMG_3	-16	0	-	0	0	.
chr2	147015792	147015793	chr2:147015793:T:C	rs113067567	T	C	C	SOX2_HMG_3	-19	0	-	0	0	.
chr2	147278575	147278576	chr2:147278576:T:G	chr2:147278576:T:G	T	G	T	SOX2_HMG_3	-16	0	+	0	0	.
chr2	147425097	147425098	chr2:147425098:T:C	rs12624284	T	C	T	SOX2_HMG_3	33	0	-	0	0	.
chr2	147572723	147572724	chr2:147572724:T:C	rs75674788	T	C	T	SOX2_HMG_3	36	0	-	0	0	.
chr2	147848036	147848037	chr2:147848037:T:C	rs113176641	T	C	T	SOX2_HMG_3	35	0	+	0	0	.
chr2	147945740	147945741	chr2:147945741:C:T	rs1531032	C	T	C	SOX2_HMG_3	19	0	-	0	0	.
chr2	148028211	148028212	chr2:148028212:T:C	rs1234396	T	C	C	SOX2_HMG_3	29	0	+	0	0	.
chr2	148680641	148680642	chr2:148680642:G:A	rs6759083	G	A	A	SOX2_HMG_3	-11	0	+	0	0	.
chr2	149156344	149156345	chr2:149156345:T:A	rs229319	T	A	A	SOX2_HMG_3	29	0	+	0	0	.
chr2	149429101	149429102	chr2:149429102:A:G	rs11680806	A	G	G	SOX2_HMG_3	35	0	-	0	0	.
chr2	149813706	149813707	chr2:149813707:C:T	rs17433263	C	T	C	SOX2_HMG_3	-15	0	+	0	0	.
chr2	149841421	149841422	chr2:149841422:T:G	rs115957777	T	G	T	SOX2_HMG_3	-9	0	+	0	0	.
chr2	149974945	149974946	chr2:149974946:G:A	rs1437944	G	A	A	SOX2_HMG_3	25	0	+	0	0	.
chr2	150191717	150191718	chr2:150191718:A:C	rs79037091	A	C	A	SOX2_HMG_3	26	0	+	0	0	.
chr2	150526755	150526756	chr2:150526756:T:C	rs574843731	T	C	T	SOX2_HMG_3	2	1	+	9.44563179480588	4.442259724490292	GATAAATGTTATTGTTG
chr2	150695815	150695816	chr2:150695816:A:T	rs9973439	A	T	T	SOX2_HMG_3	23	0	-	0	0	.
chr2	150700711	150700712	chr2:150700712:A:G	chr2:150700712:A:G	A	G	A	SOX2_HMG_3	-18	0	-	0	0	.
chr2	150735799	150735800	chr2:150735800:G:A	rs16828597	G	A	G	SOX2_HMG_3	-10	0	-	0	0	.
chr2	150879290	150879291	chr2:150879291:G:T	rs726503	G	T	G	SOX2_HMG_3	17	0	+	0	0	.
chr2	150879292	150879293	chr2:150879293:T:A	rs115785866	T	A	T	SOX2_HMG_3	19	0	+	0	0	.
chr2	151064057	151064058	chr2:151064058:G:A	rs6731235	G	A	G	SOX2_HMG_3	-12	0	+	0	0	.
chr2	152339874	152339875	chr2:152339875:A:G	rs78528713	A	G	A	SOX2_HMG_3	12	1	+	3.9452004300336116	3.9452004300336116	CAGCAATACTATAGATG
chr2	152558429	152558430	chr2:152558430:A:G	rs10193104	A	G	A	SOX2_HMG_3	22	0	+	0	0	.
chr2	153199064	153199065	chr2:153199065:T:C	rs76770116	T	C	C	SOX2_HMG_3	16	1	-	3.739773115139119	4.01346073152939	GGTCAACACTATTGTTA
chr2	153223327	153223328	chr2:153223328:T:C	rs13021536	T	C	T	SOX2_HMG_3	1	1	-	10.309411926711489	8.477764336632198	GATCAATTTGATTGATA
chr2	154010525	154010526	chr2:154010526:A:T	rs72868408	A	T	A	SOX2_HMG_3	4	1	+	2.3889094695143287	-4.519845309800892	CATCAAGGTTATTGGCC
chr2	154062190	154062191	chr2:154062191:G:A	rs10199337	G	A	G	SOX2_HMG_3	-6	0	+	0	0	.
chr2	154138027	154138028	chr2:154138028:T:G	rs1345948	T	G	G	SOX2_HMG_3	21	0	-	0	0	.
chr2	154402378	154402379	chr2:154402379:T:C	rs551618021	T	C	T	SOX2_HMG_3	-7	0	-	0	0	.
chr2	154760179	154760180	chr2:154760180:T:G	rs2961962	T	G	G	SOX2_HMG_3	31	0	-	0	0	.
chr2	154794687	154794688	chr2:154794688:A:T	rs2591154	A	T	A	SOX2_HMG_3	27	0	+	0	0	.
chr2	154850245	154850246	chr2:154850246:C:T	rs76416475	C	T	C	SOX2_HMG_3	13	1	-	4.14464009877929	-2.7641146805359296	AATAAATGCAAGTGACT
chr2	155452329	155452330	chr2:155452330:T:A	rs1023977	T	A	T	SOX2_HMG_3	30	0	-	0	0	.
chr2	155526889	155526890	chr2:155526890:A:G	rs1524910	A	G	G	SOX2_HMG_3	0	1	-	3.3231187780092766	3.460447756057941	TATCAATGATAATAATA
chr2	156010106	156010107	chr2:156010107:T:C	rs1949991	T	C	T	SOX2_HMG_3	-10	0	-	0	0	.
chr2	156565067	156565068	chr2:156565068:A:G	rs59986751	A	G	A	SOX2_HMG_3	-17	0	-	0	0	.
chr2	156931751	156931752	chr2:156931752:T:C	rs73013794	T	C	T	SOX2_HMG_3	-15	0	-	0	0	.
chr2	157019549	157019550	chr2:157019550:A:C	rs73010790	A	C	C	SOX2_HMG_3	34	0	+	0	0	.
chr2	157160397	157160398	chr2:157160398:G:A	rs7596456	G	A	G	SOX2_HMG_3	-9	0	-	0	0	.
chr2	157477507	157477508	chr2:157477508:T:C	rs145203333	T	C	T	SOX2_HMG_3	-17	0	+	0	0	.
chr2	157840669	157840670	chr2:157840670:C:T	rs116069638	C	T	C	SOX2_HMG_3	-14	0	+	0	0	.
chr2	157899153	157899154	chr2:157899154:C:T	rs80054641	C	T	C	SOX2_HMG_3	13	1	-	3.469670879576434	-3.4390838997387854	GATGAATGGAAATGATG
chr2	158458490	158458491	chr2:158458491:G:T	rs6437182	G	T	T	SOX2_HMG_3	33	0	+	0	0	.
chr2	158461043	158461044	chr2:158461044:G:A	rs73966671	G	A	G	SOX2_HMG_3	35	0	+	0	0	.
chr2	158560447	158560448	chr2:158560448:A:G	rs72936958	A	G	A	SOX2_HMG_3	20	0	+	0	0	.
chr2	158681355	158681356	chr2:158681356:A:G	rs3142	A	G	G	SOX2_HMG_3	28	0	-	0	0	.
chr2	158781611	158781612	chr2:158781612:A:C	rs61129598	A	C	A	SOX2_HMG_3	-18	0	-	0	0	.
chr2	158846018	158846019	chr2:158846019:T:G	rs145835089	T	G	T	SOX2_HMG_3	32	0	+	0	0	.
chr2	159201938	159201939	chr2:159201939:T:C	rs13003172	T	C	T	SOX2_HMG_3	29	0	-	0	0	.
chr2	159284938	159284939	chr2:159284939:G:A	rs73968311	G	A	G	SOX2_HMG_3	-2	0	+	0	0	.
chr2	159449751	159449752	chr2:159449752:C:T	rs4142233	C	T	T	SOX2_HMG_3	-11	0	-	0	0	.
chr2	159851934	159851935	chr2:159851935:C:A	rs2556086	C	A	A	SOX2_HMG_3	-16	0	+	0	0	.
chr2	159900421	159900422	chr2:159900422:T:C	rs72957580	T	C	T	SOX2_HMG_3	-17	0	+	0	0	.
chr2	160037520	160037521	chr2:160037521:G:T	rs74457992	G	T	G	SOX2_HMG_3	24	0	-	0	0	.
chr2	160373822	160373823	chr2:160373823:A:G	rs76502099	A	G	A	SOX2_HMG_3	6	1	-	3.6725088130066235	-3.236245966308596	AAGCAATGCAATTAAGG
chr2	160461673	160461674	chr2:160461674:C:T	rs147435169	C	T	C	SOX2_HMG_3	0	1	-	1.0567852472040045	0.8361909681187107	GGTGAGTGGCAGTGATG
chr2	162344896	162344897	chr2:162344897:C:T	rs75779674	C	T	C	SOX2_HMG_3	3	1	+	7.0524171617866465	0.1436623824714276	TATCGATGTCAGTGATC
chr2	162587498	162587499	chr2:162587499:C:T	rs1385865	C	T	T	SOX2_HMG_3	22	0	+	0	0	.
chr2	163169686	163169687	chr2:163169687:G:A	rs1489636	G	A	A	SOX2_HMG_3	-19	0	-	0	0	.
chr2	163452748	163452749	chr2:163452749:T:C	rs12989737	T	C	T	SOX2_HMG_3	17	0	-	0	0	.
chr2	163523687	163523688	chr2:163523688:G:A	rs2389932	G	A	G	SOX2_HMG_3	-3	0	+	0	0	.
chr2	164108309	164108310	chr2:164108310:T:C	rs7594255	T	C	T	SOX2_HMG_3	17	0	+	0	0	.
chr2	164470759	164470760	chr2:164470760:C:T	rs12464219	C	T	C	SOX2_HMG_3	-17	0	-	0	0	.
chr2	164697791	164697792	chr2:164697792:C:T	rs78970517	C	T	C	SOX2_HMG_3	32	0	+	0	0	.
chr2	164843093	164843094	chr2:164843094:C:T	rs3806544	C	T	C	SOX2_HMG_3	-10	0	-	0	0	.
chr2	165170193	165170194	chr2:165170194:G:A	rs11891394	G	A	A	SOX2_HMG_3	29	0	-	0	0	.
chr2	165505897	165505898	chr2:165505898:C:T	rs4667488	C	T	T	SOX2_HMG_3	18	0	+	0	0	.
chr2	165562699	165562700	chr2:165562700:A:G	rs6708364	A	G	A	SOX2_HMG_3	-8	0	-	0	0	.
chr2	165602085	165602086	chr2:165602086:T:A	rs73029859	T	A	t	SOX2_HMG_3	-19	0	+	0	0	.
chr2	165637478	165637479	chr2:165637479:A:T	rs150701870	A	T	A	SOX2_HMG_3	-18	0	-	0	0	.
chr2	165640508	165640509	chr2:165640509:G:A	chr2:165640509:G:A	G	A	G	SOX2_HMG_3	7	1	-	3.8874944768712214	8.575626183573661	TATCAATCCTAATGATG
chr2	165884231	165884232	chr2:165884232:T:C	rs560499107	T	C	T	SOX2_HMG_3	11	1	+	4.504493150316097	-2.18819834791625	GGTCAAGATAATTGAAG
chr2	165903846	165903847	chr2:165903847:T:G	rs1036147	T	G	T	SOX2_HMG_3	4	1	-	2.9237213747500963	-3.9850334045651232	AGTCAAAGTTTTTGATA
chr2	165903847	165903848	chr2:165903848:G:C	rs1036148	G	C	G	SOX2_HMG_3	3	1	-	2.9237213747500963	-3.9850334045651232	AGTCAAAGTTTTTGATA
chr2	165947144	165947145	chr2:165947145:T:A	chr2:165947145:T:A	T	A	T	SOX2_HMG_3	-9	0	-	0	0	.
chr2	166146638	166146639	chr2:166146639:A:G	rs7591278	A	G	A	SOX2_HMG_3	14	1	+	4.323723950393958	0.14184633309283928	TGTCAATAGTACTGAGT
chr2	166171330	166171331	chr2:166171331:A:G	rs4667881	A	G	A	SOX2_HMG_3	12	1	-	3.4009930910335755	-3.507761688281644	GAGCAATTAACTTGATG
chr2	166739186	166739187	chr2:166739187:C:G	rs62194550	C	G	C	SOX2_HMG_3	24	0	+	0	0	.
chr2	167181641	167181642	chr2:167181642:G:T	rs6748606	G	T	G	SOX2_HMG_3	17	0	-	0	0	.
chr2	167794523	167794524	chr2:167794524:A:G	rs700542	A	G	A	SOX2_HMG_3	16	1	+	8.249140637244029	8.5228282536343	AACCAATTTAAGTGATA
chr2	167802159	167802160	chr2:167802160:A:G	rs4667976	A	G	A	SOX2_HMG_3	-12	0	-	0	0	.
chr2	167924308	167924309	chr2:167924309:C:T	rs80004484	C	T	C	SOX2_HMG_3	1	1	+	4.344208590777964	4.344208590777964	GCGCAATGGTATTTATT
chr2	168025945	168025946	chr2:168025946:T:C	rs6717944	T	C	T	SOX2_HMG_3	6	1	+	3.2820954420216584	-3.6266593372935616	CAGCAATGACATTCAGT
chr2	168069487	168069488	chr2:168069488:C:T	rs80199186	C	T	C	SOX2_HMG_3	23	0	-	0	0	.
chr2	168222379	168222380	chr2:168222380:T:G	rs1807984	T	G	T	SOX2_HMG_3	13	1	+	5.300699740120378	12.2094545194356	TATCAATTGCATTTTTA
chr2	168339168	168339169	chr2:168339169:G:A	rs74414868	G	A	G	SOX2_HMG_3	21	0	-	0	0	.
chr2	168482317	168482318	chr2:168482318:C:A	rs3956565	C	A	A	SOX2_HMG_3	20	0	+	0	0	.
chr2	168482318	168482319	chr2:168482319:G:A	rs7557806	G	A	G	SOX2_HMG_3	21	0	+	0	0	.
chr2	168920786	168920787	chr2:168920787:A:G	rs78529720	A	G	A	SOX2_HMG_3	-7	0	+	0	0	.
chr2	168976936	168976937	chr2:168976937:G:T	rs28727965	G	T	T	SOX2_HMG_3	-16	0	+	0	0	.
chr2	168976988	168976989	chr2:168976989:C:A	rs28719023	C	A	A	SOX2_HMG_3	36	0	+	0	0	.
chr2	169069350	169069351	chr2:169069351:A:G	rs2287611	A	G	A	SOX2_HMG_3	-16	0	+	0	0	.
chr2	169210595	169210596	chr2:169210596:A:G	rs116480433	A	G	A	SOX2_HMG_3	-20	0	+	0	0	.
chr2	169397900	169397901	chr2:169397901:G:A	rs141434288	G	A	G	SOX2_HMG_3	30	0	-	0	0	.
chr2	169468936	169468937	chr2:169468937:T:C	rs74946619	T	C	T	SOX2_HMG_3	29	0	+	0	0	.
chr2	169508001	169508002	chr2:169508002:A:G	rs80090638	A	G	A	SOX2_HMG_3	-16	0	-	0	0	.
chr2	169620163	169620164	chr2:169620164:A:G	rs72623202	A	G	A	SOX2_HMG_3	5	1	+	2.46055064309808	-4.44820413621714	AACCAATGTCATGGAGC
chr2	169620168	169620169	chr2:169620169:A:G	rs76748975	A	G	A	SOX2_HMG_3	10	1	+	2.46055064309808	-4.44820413621714	AACCAATGTCATGGAGC
chr2	169767249	169767250	chr2:169767250:A:G	rs36124041	A	G	A	SOX2_HMG_3	10	1	+	3.208078289651185	-3.7006764896640356	GATCACTGTCATAGAAG
chr2	169925827	169925828	chr2:169925828:C:T	rs13016918	C	T	A	SOX2_HMG_3	-16	0	+	0	0	.
chr2	169925845	169925846	chr2:169925846:C:T	rs61092155	C	T	C	SOX2_HMG_3	2	1	+	9.045144218860612	14.048516289176202	GGCCAATGCCATTGAAA
chr2	170017698	170017699	chr2:170017699:A:T	rs10497355	A	T	A	SOX2_HMG_3	-11	0	-	0	0	.
chr2	170073369	170073370	chr2:170073370:G:A	rs10202446	G	A	G	SOX2_HMG_3	32	0	+	0	0	.
chr2	170283151	170283152	chr2:170283152:C:T	rs12612480	C	T	T	SOX2_HMG_3	-17	0	+	0	0	.
chr2	170441829	170441830	chr2:170441830:C:T	rs116020262	C	T	T	SOX2_HMG_3	-10	0	-	0	0	.
chr2	170499018	170499019	chr2:170499019:C:T	rs6733235	C	T	T	SOX2_HMG_3	6	1	+	2.0060369575233077	8.914791736838529	TATTAACGGCAGTGATG
chr2	170651751	170651752	chr2:170651752:G:A	rs6724627	G	A	A	SOX2_HMG_3	25	0	-	0	0	.
chr2	170766136	170766137	chr2:170766137:C:A	rs56852746	C	A	A	SOX2_HMG_3	5	1	-	4.1225202443258215	4.1225202443258215	AAACAGTGTTATTGTAG
chr2	170813499	170813500	chr2:170813500:C:T	rs57026097	C	T	C	SOX2_HMG_3	18	0	-	0	0	.
chr2	171107039	171107040	chr2:171107040:C:T	rs10207361	C	T	C	SOX2_HMG_3	16	1	-	5.617940942915197	5.3442533265249255	GGTAAATGGAATTGTTG
chr2	172231882	172231883	chr2:172231883:C:T	rs10167005	C	T	T	SOX2_HMG_3	22	0	-	0	0	.
chr2	172275526	172275527	chr2:172275527:G:C	rs10193528	G	C	C	SOX2_HMG_3	8	1	-	5.920643411208362	6.654911843979562	TGTCATTGCTAGTGAAG
chr2	172337551	172337552	chr2:172337552:A:G	rs7556723	A	G	A	SOX2_HMG_3	20	0	-	0	0	.
chr2	172405435	172405436	chr2:172405436:G:A	rs114982173	G	A	G	SOX2_HMG_3	-3	0	+	0	0	.
chr2	172422878	172422879	chr2:172422879:A:G	rs11686909	A	G	A	SOX2_HMG_3	-10	0	+	0	0	.
chr2	172449879	172449880	chr2:172449880:C:T	rs2178471	C	T	T	SOX2_HMG_3	-16	0	+	0	0	.
chr2	172735206	172735207	chr2:172735207:T:G	rs3813813	T	G	T	SOX2_HMG_3	33	0	+	0	0	.
chr2	173101911	173101912	chr2:173101912:G:A	rs76353190	G	A	G	SOX2_HMG_3	20	0	-	0	0	.
chr2	173218442	173218443	chr2:173218443:C:A	rs7566372	C	A	C	SOX2_HMG_3	-14	0	-	0	0	.
chr2	173347943	173347944	chr2:173347944:A:G	rs1560834	A	G	A	SOX2_HMG_3	24	0	-	0	0	.
chr2	173392945	173392946	chr2:173392946:C:T	rs67304191	C	T	C	SOX2_HMG_3	11	1	-	5.4352908864449105	0.1596793574325126	AAACAAGGGCAGTGATA
chr2	173504592	173504593	chr2:173504593:T:A	rs117131394	T	A	T	SOX2_HMG_3	-13	0	+	0	0	.
chr2	173589281	173589282	chr2:173589282:G:C	rs530673	G	C	G	SOX2_HMG_3	-20	0	-	0	0	.
chr2	174593848	174593849	chr2:174593849:A:G	rs1209399841	A	G	A	SOX2_HMG_3	-18	0	-	0	0	.
chr2	174749987	174749988	chr2:174749988:G:A	rs2229957	G	A	G	SOX2_HMG_3	-14	0	+	0	0	.
chr2	175070152	175070153	chr2:175070153:T:A	rs1153697	T	A	A	SOX2_HMG_3	-11	0	-	0	0	.
chr2	175890465	175890466	chr2:175890466:T:G	rs78426082	T	G	T	SOX2_HMG_3	-15	0	-	0	0	.
chr2	175948794	175948795	chr2:175948795:A:C	rs57025757	A	C	A	SOX2_HMG_3	14	1	+	4.913460039407273	-1.91883866615942	GTTCATTGCAATTGAAA
chr2	176291886	176291887	chr2:176291887:G:C	rs6713926	G	C	G	SOX2_HMG_3	-11	0	+	0	0	.
chr2	176550003	176550004	chr2:176550004:T:C	rs2922333	T	C	T	SOX2_HMG_3	29	0	-	0	0	.
chr2	176783661	176783662	chr2:176783662:C:A	rs72934892	C	A	C	SOX2_HMG_3	34	0	+	0	0	.
chr2	176845829	176845830	chr2:176845830:G:A	rs1866132	G	A	A	SOX2_HMG_3	-5	0	-	0	0	.
chr2	176845834	176845835	chr2:176845835:T:G	rs1866133	T	G	G	SOX2_HMG_3	-10	0	-	0	0	.
chr2	177213274	177213275	chr2:177213275:C:T	rs1037658893	C	T	C	SOX2_HMG_3	0	1	-	7.187648923684085	6.967054644598791	GATCAATGTCAATGTGG
chr2	177213280	177213281	chr2:177213281:C:T	rs1056235695	C	T	C	SOX2_HMG_3	-6	0	-	0	0	.
chr2	177472149	177472150	chr2:177472150:A:G	rs10170667	A	G	A	SOX2_HMG_3	12	1	-	2.771073710097863	-4.137681069217356	AATCAATGTCCCTGAGG
chr2	177675483	177675484	chr2:177675484:C:T	rs140269105	C	T	C	SOX2_HMG_3	35	0	-	0	0	.
chr2	177746513	177746514	chr2:177746514:A:C	rs749208	A	C	A	SOX2_HMG_3	-20	0	-	0	0	.
chr2	177933245	177933246	chr2:177933246:T:C	rs10164794	T	C	T	SOX2_HMG_3	23	0	+	0	0	.
chr2	178089088	178089089	chr2:178089089:C:T	rs56103916	C	T	C	SOX2_HMG_3	13	1	-	5.579138183012094	-1.3296165963031261	CATCAATCGTAGTGGTA
chr2	178332130	178332131	chr2:178332131:T:C	rs80211690	T	C	C	SOX2_HMG_3	35	0	-	0	0	.
chr2	178556966	178556967	chr2:178556967:A:G	rs9808377	A	G	G	SOX2_HMG_3	26	0	-	0	0	.
chr2	178834217	178834218	chr2:178834218:G:A	rs16866554	G	A	G	SOX2_HMG_3	0	1	-	2.981390873751503	2.8440618957028394	CGTCTATGTTAGTGTGT
chr2	179580290	179580291	chr2:179580291:G:T	rs80300097	G	T	G	SOX2_HMG_3	-5	0	-	0	0	.
chr2	179874722	179874723	chr2:179874723:C:A	rs1486236	C	A	A	SOX2_HMG_3	-6	0	+	0	0	.
chr2	180090635	180090636	chr2:180090636:T:C	rs6723904	T	C	T	SOX2_HMG_3	6	1	+	5.252037068549257	-1.6567177107659652	AGACAGTGATATTGATG
chr2	180130547	180130548	chr2:180130548:T:C	rs10497559	T	C	T	SOX2_HMG_3	5	1	-	4.495169689227148	-2.413585090088072	GATGAATGCAAGTGTTT
chr2	180547703	180547704	chr2:180547704:C:T	rs1490885649	C	T	C	SOX2_HMG_3	28	0	+	0	0	.
chr2	180600008	180600009	chr2:180600009:C:T	rs35587150	C	T	C	SOX2_HMG_3	25	0	-	0	0	.
chr2	180600016	180600017	chr2:180600017:G:T	rs17364268	G	T	G	SOX2_HMG_3	17	0	-	0	0	.
chr2	180633574	180633575	chr2:180633575:C:G	rs4667223	C	G	C	SOX2_HMG_3	-12	0	-	0	0	.
chr2	181184443	181184444	chr2:181184444:A:G	rs73029172	A	G	A	SOX2_HMG_3	22	0	-	0	0	.
chr2	181197339	181197340	chr2:181197340:C:T	rs4233791	C	T	c	SOX2_HMG_3	-19	0	+	0	0	.
chr2	181203925	181203926	chr2:181203926:T:A	rs4667142	T	A	T	SOX2_HMG_3	-7	0	-	0	0	.
chr2	181486584	181486585	chr2:181486585:C:A	rs155105	C	A	A	SOX2_HMG_3	1	1	-	4.885584626081517	3.7111883636374934	CGTCAATATCAGTGGGT
chr2	182098178	182098179	chr2:182098179:C:T	rs6748404	C	T	T	SOX2_HMG_3	30	0	+	0	0	.
chr2	182142380	182142381	chr2:182142381:C:T	rs138402992	C	T	C	SOX2_HMG_3	32	0	-	0	0	.
chr2	182164884	182164885	chr2:182164885:A:G	rs1196067	A	G	G	SOX2_HMG_3	-16	0	-	0	0	.
chr2	182435918	182435919	chr2:182435919:A:G	rs10207132	A	G	A	SOX2_HMG_3	10	1	+	9.714061257377885	2.8053064780626644	AATCAATGTCAGTAATG
chr2	182558882	182558883	chr2:182558883:A:G	rs35960621	A	G	A	SOX2_HMG_3	-12	0	+	0	0	.
chr2	182558909	182558910	chr2:182558910:C:T	rs1430156	C	T	T	SOX2_HMG_3	15	1	+	3.238150374780768	6.080859530957626	ATTCAATCTCAGTGACT
chr2	182717442	182717443	chr2:182717443:A:G	rs17356755	A	G	A	SOX2_HMG_3	21	0	-	0	0	.
chr2	184067242	184067243	chr2:184067243:A:G	rs13411857	A	G	A	SOX2_HMG_3	-7	0	-	0	0	.
chr2	184372014	184372015	chr2:184372015:C:T	rs71430149	C	T	C	SOX2_HMG_3	-10	0	+	0	0	.
chr2	185300530	185300531	chr2:185300531:A:G	rs6712589	A	G	A	SOX2_HMG_3	7	1	+	2.7563561533513568	5.4851432739126915	GCTCAATATTCTTGAGC
chr2	185578647	185578648	chr2:185578648:A:G	rs34879834	A	G	A	SOX2_HMG_3	-8	0	-	0	0	.
chr2	186105342	186105343	chr2:186105343:C:T	rs147312753	C	T	C	SOX2_HMG_3	16	1	-	3.016582555919856	2.7428949395295845	AAACAATGCTTTTGGTG
chr2	186336584	186336585	chr2:186336585:G:T	rs2044683	G	T	G	SOX2_HMG_3	-13	0	-	0	0	.
chr2	186347618	186347619	chr2:186347619:T:C	rs183444867	T	C	T	SOX2_HMG_3	5	1	-	4.483465166829788	-2.425289612485432	ATTCAATTATGGTGATG
chr2	186733193	186733194	chr2:186733194:A:G	rs10165992	A	G	A	SOX2_HMG_3	6	1	-	9.090030414025152	2.1812756347099325	AATCCATTTTATTGATT
chr2	187391430	187391431	chr2:187391431:G:A	rs3821183	G	A	G	SOX2_HMG_3	0	1	+	4.203321791864479	3.9827275127791855	GGTCAAGTTAAGTGATT
chr2	187403990	187403991	chr2:187403991:T:G	rs77895136	T	G	T	SOX2_HMG_3	7	1	+	4.002132239460182	6.046842744193718	AATCCATTTCAGTGAGC
chr2	187489306	187489307	chr2:187489307:A:G	rs8176606	A	G	A	SOX2_HMG_3	5	1	+	3.673604938278932	-3.2351498410362876	TGTCTATGAAAGTGAAA
chr2	188415877	188415878	chr2:188415878:C:G	rs4381754	C	G	C	SOX2_HMG_3	8	1	-	6.074153264045448	5.339884831274247	AAACAATGGAATTAATG
chr2	188415902	188415903	chr2:188415903:A:G	rs4476318	A	G	A	SOX2_HMG_3	-17	0	-	0	0	.
chr2	188524140	188524141	chr2:188524141:A:G	rs558330372	A	G	A	SOX2_HMG_3	-1	0	+	0	0	.
chr2	188609053	188609054	chr2:188609054:C:T	rs6434291	C	T	T	SOX2_HMG_3	19	0	-	0	0	.
chr2	188788631	188788632	chr2:188788632:G:A	rs183236548	G	A	G	SOX2_HMG_3	2	1	+	3.4853280186779685	3.4853280186779685	TAGCAATGTCATTCACA
chr2	188940352	188940353	chr2:188940353:A:G	rs746595467	A	G	A	SOX2_HMG_3	32	0	-	0	0	.
chr2	189124576	189124577	chr2:189124577:C:T	rs1515869	C	T	T	SOX2_HMG_3	26	0	-	0	0	.
chr2	189212109	189212110	chr2:189212110:T:C	rs11678388	T	C	T	SOX2_HMG_3	-11	0	-	0	0	.
chr2	189517204	189517205	chr2:189517205:C:T	rs4417750	C	T	T	SOX2_HMG_3	-18	0	+	0	0	.
chr2	190180465	190180466	chr2:190180466:C:G	rs12993362	C	G	c	SOX2_HMG_3	26	0	-	0	0	.
chr2	190180481	190180482	chr2:190180482:T:G	rs13019730	T	G	t	SOX2_HMG_3	10	1	-	4.123527236488019	-2.785227542827201	GGTCAATGAAAGTAAGA
chr2	190197304	190197305	chr2:190197305:C:T	rs11894667	C	T	C	SOX2_HMG_3	23	0	-	0	0	.
chr2	190283831	190283832	chr2:190283832:G:A	rs2664253	G	A	G	SOX2_HMG_3	-2	0	-	0	0	.
chr2	190506922	190506923	chr2:190506923:G:A	rs8962	G	A	G	SOX2_HMG_3	21	0	+	0	0	.
chr2	190540237	190540238	chr2:190540238:G:A	rs4853718	G	A	G	SOX2_HMG_3	-11	0	-	0	0	.
chr2	190981264	190981265	chr2:190981265:C:G	rs3755312	C	G	C	SOX2_HMG_3	-6	0	+	0	0	.
chr2	191155891	191155892	chr2:191155892:A:C	rs1031507	A	C	C	SOX2_HMG_3	11	1	-	4.104982394557524	2.6879024253375756	AAACAATGCATTTGAAG
chr2	191171833	191171834	chr2:191171834:A:T	rs6434448	A	T	T	SOX2_HMG_3	-7	0	+	0	0	.
chr2	191355309	191355310	chr2:191355310:A:G	rs34303459	A	G	A	SOX2_HMG_3	-10	0	+	0	0	.
chr2	191748728	191748729	chr2:191748729:C:A	rs7584848	C	A	C	SOX2_HMG_3	36	0	+	0	0	.
chr2	191812227	191812228	chr2:191812228:G:A	rs555052459	G	A	G	SOX2_HMG_3	34	0	+	0	0	.
chr2	192107802	192107803	chr2:192107803:A:C	rs7557901	A	C	A	SOX2_HMG_3	7	1	-	8.847266793078262	10.891977297811797	AGTCAATTTTATTGGGA
chr2	192267551	192267552	chr2:192267552:C:T	rs12611645	C	T	C	SOX2_HMG_3	35	0	-	0	0	.
chr2	192774853	192774854	chr2:192774854:T:C	rs16834909	T	C	T	SOX2_HMG_3	23	0	-	0	0	.
chr2	193751522	193751523	chr2:193751523:C:A	rs71418895	C	A	C	SOX2_HMG_3	26	0	-	0	0	.
chr2	195189155	195189156	chr2:195189156:T:G	rs1511265	T	G	G	SOX2_HMG_3	19	0	+	0	0	.
chr2	196161991	196161992	chr2:196161992:T:C	rs1519600	T	C	C	SOX2_HMG_3	5	1	-	7.7365304922957705	0.827775712980551	AAACAATGTGATTGATT
chr2	196165861	196165862	chr2:196165862:T:A	rs16846171	T	A	T	SOX2_HMG_3	20	0	-	0	0	.
chr2	196193261	196193262	chr2:196193262:G:C	rs10171929	G	C	C	SOX2_HMG_3	-19	0	-	0	0	.
chr2	196225434	196225435	chr2:196225435:A:T	rs16847560	A	T	T	SOX2_HMG_3	4	1	+	4.355589429471139	-2.5531653498440816	CAACAATTCTATTAATA
chr2	196244539	196244540	chr2:196244540:A:G	rs12990533	A	G	A	SOX2_HMG_3	11	1	-	4.26860730924995	-2.4240841889823965	CAGCCATGTCATTGAGT
chr2	196249773	196249774	chr2:196249774:T:C	rs555558245	T	C	T	SOX2_HMG_3	-9	0	-	0	0	.
chr2	196308091	196308092	chr2:196308092:G:A	rs2305567	G	A	A	SOX2_HMG_3	7	1	+	4.24137186604759	1.5125847454862553	TCTAAATGGCAGTGAGG
chr2	196903662	196903663	chr2:196903663:G:A	rs150396935	G	A	G	SOX2_HMG_3	15	1	-	8.660323533323757	11.503032689500616	TGTCAATGGTATTGTCC
chr2	197052798	197052799	chr2:197052799:C:T	rs79997846	C	T	C	SOX2_HMG_3	-1	0	-	0	0	.
chr2	197075889	197075890	chr2:197075890:A:C	rs137930548	A	C	A	SOX2_HMG_3	27	0	-	0	0	.
chr2	197296470	197296471	chr2:197296471:A:G	rs2195510	A	G	G	SOX2_HMG_3	27	0	+	0	0	.
chr2	197297278	197297279	chr2:197297279:T:C	rs7593063	T	C	T	SOX2_HMG_3	-20	0	-	0	0	.
chr2	197521450	197521451	chr2:197521451:C:T	rs9973444	C	T	C	SOX2_HMG_3	20	0	-	0	0	.
chr2	197924288	197924289	chr2:197924289:T:C	rs12995110	T	C	-	SOX2_HMG_3	10	1	-	5.262706367060073	-1.6460484122551473	GAACAAAGACATTGAAG
chr2	198611247	198611248	chr2:198611248:C:A	rs10931819	C	A	C	SOX2_HMG_3	-17	0	-	0	0	.
chr2	198706755	198706756	chr2:198706756:T:C	rs1356486	T	C	t	SOX2_HMG_3	1	1	-	3.632847605957767	1.8012000158784751	CATCTAAGCTATTGATG
chr2	198914198	198914199	chr2:198914199:G:C	rs1840751	G	C	G	SOX2_HMG_3	25	0	-	0	0	.
chr2	199136509	199136510	chr2:199136510:G:A	rs4144848	G	A	G	SOX2_HMG_3	23	0	+	0	0	.
chr2	199229269	199229270	chr2:199229270:A:G	rs28770543	A	G	G	SOX2_HMG_3	6	1	-	3.6867142960422807	-3.222040483272939	GAACAATGCCAGGGAAA
chr2	199592838	199592839	chr2:199592839:A:G	rs4234081	A	G	G	SOX2_HMG_3	1	1	+	4.655957576058235	2.824309985978943	CATAAATAGCAGTGAGG
chr2	199606677	199606678	chr2:199606678:T:C	rs6723090	T	C	T	SOX2_HMG_3	8	1	-	5.0183076977841825	5.867351645147812	TTTCAATAACAGTGTAA
chr2	200076873	200076874	chr2:200076874:G:A	rs3115423	G	A	A	SOX2_HMG_3	-19	0	+	0	0	.
chr2	200192720	200192721	chr2:200192721:G:A	rs62181774	G	A	G	SOX2_HMG_3	-2	0	+	0	0	.
chr2	200239509	200239510	chr2:200239510:A:C	rs1035290526	A	C	A	SOX2_HMG_3	33	0	-	0	0	.
chr2	200244263	200244264	chr2:200244264:C:A	rs1369842	C	A	A	SOX2_HMG_3	-3	0	-	0	0	.
chr2	200339970	200339971	chr2:200339971:C:T	rs72918492	C	T	C	SOX2_HMG_3	19	0	-	0	0	.
chr2	200454297	200454298	chr2:200454298:G:A	rs3769439	G	A	G	SOX2_HMG_3	3	1	-	9.281075779571852	2.372321000256629	CATCAATGTAGTTGATA
chr2	200656510	200656511	chr2:200656511:C:A	rs2287013	C	A	A	SOX2_HMG_3	3	1	+	5.158607388451231	-1.7501473908639877	AAACAATTTTAGTGTCT
chr2	200901299	200901300	chr2:200901300:C:G	rs6435066	C	G	G	SOX2_HMG_3	13	1	-	6.631562182487138	-0.2771925968280825	TGTCAATGCTATGGAGA
chr2	201573266	201573267	chr2:201573267:T:C	rs12693942	T	C	T	SOX2_HMG_3	9	1	+	3.562512801727063	2.755842667790017	GACCTATGGTAGTGAAT
chr2	201739464	201739465	chr2:201739465:G:A	rs13014562	G	A	G	SOX2_HMG_3	20	0	+	0	0	.
chr2	201831299	201831300	chr2:201831300:G:A	rs6735557	G	A	G	SOX2_HMG_3	-15	0	+	0	0	.
chr2	202125463	202125464	chr2:202125464:A:G	rs4675261	A	G	G	SOX2_HMG_3	-18	0	+	0	0	.
chr2	202317316	202317317	chr2:202317317:G:A	rs12466003	G	A	G	SOX2_HMG_3	7	1	+	5.010834819746187	2.2820476991848517	AGTTAATGCCAGTGATC
chr2	203574974	203574975	chr2:203574975:G:A	rs151087518	G	A	G	SOX2_HMG_3	-8	0	+	0	0	.
chr2	203574977	203574978	chr2:203574978:C:T	rs7594831	C	T	C	SOX2_HMG_3	-5	0	+	0	0	.
chr2	203808085	203808086	chr2:203808086:A:G	rs231821	A	G	A	SOX2_HMG_3	11	1	-	3.7761568993118235	-2.9165345989205234	GTGCATTGTTATTGAAA
chr2	203849167	203849168	chr2:203849168:G:T	rs231811	G	T	G	SOX2_HMG_3	-8	0	-	0	0	.
chr2	203869984	203869985	chr2:203869985:A:G	rs758080085	A	G	A	SOX2_HMG_3	2	1	+	3.2153350107212293	3.2153350107212293	CAACAATGCCAGGGAAG
chr2	204000845	204000846	chr2:204000846:T:C	rs13411062	T	C	T	SOX2_HMG_3	19	0	-	0	0	.
chr2	204086544	204086545	chr2:204086545:G:A	rs961738	G	A	A	SOX2_HMG_3	-5	0	+	0	0	.
chr2	204296823	204296824	chr2:204296824:T:A	rs6724362	T	A	a	SOX2_HMG_3	-18	0	+	0	0	.
chr2	205106888	205106889	chr2:205106889:G:A	rs13414808	G	A	G	SOX2_HMG_3	-17	0	-	0	0	.
chr2	205361513	205361514	chr2:205361514:A:G	rs1398054	A	G	A	SOX2_HMG_3	32	0	-	0	0	.
chr2	205408563	205408564	chr2:205408564:G:A	rs79592426	G	A	G	SOX2_HMG_3	34	0	-	0	0	.
chr2	205474734	205474735	chr2:205474735:G:A	rs79123751	G	A	G	SOX2_HMG_3	24	0	+	0	0	.
chr2	205557415	205557416	chr2:205557416:T:C	rs12694027	T	C	T	SOX2_HMG_3	-3	0	-	0	0	.
chr2	205563503	205563504	chr2:205563504:T:C	rs3919545	T	C	T	SOX2_HMG_3	-14	0	-	0	0	.
chr2	205760541	205760542	chr2:205760542:C:G	rs870068	C	G	C	SOX2_HMG_3	1	1	-	4.700950676032647	3.526554413588623	AGTTAATGCTAGTGACA
chr2	205964632	205964633	chr2:205964633:G:C	rs6748181	G	C	G	SOX2_HMG_3	2	1	-	5.105113471628709	6.2408707072662555	TGCCAATATTATTGTTT
chr2	206158418	206158419	chr2:206158419:G:C	rs10178430	G	C	C	SOX2_HMG_3	-3	0	-	0	0	.
chr2	206689342	206689343	chr2:206689343:A:G	rs115490723	A	G	A	SOX2_HMG_3	23	0	+	0	0	.
chr2	206737324	206737325	chr2:206737325:G:A	rs4675633	G	A	G	SOX2_HMG_3	-20	0	+	0	0	.
chr2	206878992	206878993	chr2:206878993:T:C	rs56409875	T	C	T	SOX2_HMG_3	-13	0	+	0	0	.
chr2	207041528	207041529	chr2:207041529:C:G	rs113501212	C	G	C	SOX2_HMG_3	-15	0	+	0	0	.
chr2	207041545	207041546	chr2:207041546:T:A	rs77932940	T	A	T	SOX2_HMG_3	2	1	+	1.7742722640110378	-2.093342570667003	CATCAGTGCAGTTGATG
chr2	207041554	207041555	chr2:207041555:T:C	rs142343945	T	C	T	SOX2_HMG_3	11	1	+	1.7742722640110378	-4.918419234221309	CATCAGTGCAGTTGATG
chr2	207068175	207068176	chr2:207068176:A:G	rs16824796	A	G	G	SOX2_HMG_3	28	0	+	0	0	.
chr2	207225491	207225492	chr2:207225492:C:A	rs118014708	C	A	C	SOX2_HMG_3	27	0	-	0	0	.
chr2	207253976	207253977	chr2:207253977:A:C	rs147988478	A	C	A	SOX2_HMG_3	-19	0	+	0	0	.
chr2	207681309	207681310	chr2:207681310:T:C	rs10191721	T	C	T	SOX2_HMG_3	-4	0	-	0	0	.
chr2	208044274	208044275	chr2:208044275:T:A	rs6435404	T	A	T	SOX2_HMG_3	-6	0	+	0	0	.
chr2	208096699	208096700	chr2:208096700:C:A	rs6713275	C	A	c	SOX2_HMG_3	35	0	+	0	0	.
chr2	208118813	208118814	chr2:208118814:T:A	rs6435414	T	A	A	SOX2_HMG_3	18	0	-	0	0	.
chr2	208129972	208129973	chr2:208129973:C:T	rs2242071	C	T	C	SOX2_HMG_3	-12	0	-	0	0	.
chr2	208353284	208353285	chr2:208353285:A:G	rs34904313	A	G	A	SOX2_HMG_3	23	0	-	0	0	.
chr2	208638818	208638819	chr2:208638819:T:G	rs887165143	T	G	T	SOX2_HMG_3	16	1	-	3.9924233453902795	2.266268466864007	CAGTAATTTTATTGAAA
chr2	208719001	208719002	chr2:208719002:G:A	rs7603124	G	A	G	SOX2_HMG_3	-16	0	-	0	0	.
chr2	208957316	208957317	chr2:208957317:G:T	rs12478669	G	T	G	SOX2_HMG_3	0	1	+	3.788434651123358	2.9060387713633697	GAGCAATGATATGGTTT
chr2	209684453	209684454	chr2:209684454:C:A	rs3768816	C	A	C	SOX2_HMG_3	31	0	+	0	0	.
chr2	210445505	210445506	chr2:210445506:A:G	rs143933409	A	G	A	SOX2_HMG_3	16	1	-	7.672950444805204	6.476178391664851	AATGAATTTTAGTGATT
chr2	210445529	210445530	chr2:210445530:T:C	chr2:210445530:T:C	T	C	T	SOX2_HMG_3	-8	0	-	0	0	.
chr2	210956036	210956037	chr2:210956037:A:T	rs319745	A	T	T	SOX2_HMG_3	10	1	+	4.755368964829388	-2.1533858144858335	AATCAATGTTATATATA
chr2	211437423	211437424	chr2:211437424:G:A	rs17803242	G	A	G	SOX2_HMG_3	-18	0	+	0	0	.
chr2	211468316	211468317	chr2:211468317:A:C	rs10176444	A	C	C	SOX2_HMG_3	2	1	-	3.8577756401756127	-0.009839194502428539	ATTCAGTGGCAGTGTTG
chr2	211720339	211720340	chr2:211720340:G:C	rs6435664	G	C	C	SOX2_HMG_3	13	1	+	4.268201699886057	-2.640553079429164	GGTCAATGCCTTTGTGG
chr2	212110513	212110514	chr2:212110514:C:T	rs6435690	C	T	T	SOX2_HMG_3	25	0	-	0	0	.
chr2	212119900	212119901	chr2:212119901:T:C	rs12465933	T	C	T	SOX2_HMG_3	17	0	-	0	0	.
chr2	212193150	212193151	chr2:212193151:A:C	rs912554981	A	C	A	SOX2_HMG_3	4	1	+	3.1011754638979654	-3.807579315417255	ATGCAATGGCAATGAAG
chr2	212322653	212322654	chr2:212322654:T:C	rs7577906	T	C	C	SOX2_HMG_3	-9	0	-	0	0	.
chr2	212469798	212469799	chr2:212469799:C:T	rs10168850	C	T	T	SOX2_HMG_3	29	0	-	0	0	.
chr2	212516914	212516915	chr2:212516915:T:C	rs7606241	T	C	C	SOX2_HMG_3	26	0	-	0	0	.
chr2	212767029	212767030	chr2:212767030:G:C	rs7574914	G	C	G	SOX2_HMG_3	13	1	+	2.6460281682000244	-4.2627266111151965	AGGCTATGGTAGTGAAT
chr2	212870583	212870584	chr2:212870584:A:G	rs10460330	A	G	A	SOX2_HMG_3	1	1	+	4.406808910082605	2.5751613200033123	CATCAATCTTTTTGATA
chr2	212892531	212892532	chr2:212892532:C:T	rs10205723	C	T	C	SOX2_HMG_3	34	0	-	0	0	.
chr2	212907009	212907010	chr2:212907010:A:G	rs4672663	A	G	G	SOX2_HMG_3	-12	0	-	0	0	.
chr2	213045379	213045380	chr2:213045380:G:A	rs12622499	G	A	G	SOX2_HMG_3	26	0	+	0	0	.
chr2	213175322	213175323	chr2:213175323:T:A	rs4673732	T	A	T	SOX2_HMG_3	18	0	-	0	0	.
chr2	213726273	213726274	chr2:213726274:A:T	rs113856209	A	T	A	SOX2_HMG_3	-12	0	-	0	0	.
chr2	213981288	213981289	chr2:213981289:G:A	rs112543422	G	A	G	SOX2_HMG_3	-5	0	+	0	0	.
chr2	214091096	214091097	chr2:214091097:C:G	rs10187607	C	G	C	SOX2_HMG_3	32	0	-	0	0	.
chr2	214130041	214130042	chr2:214130042:A:T	rs7576348	A	T	A	SOX2_HMG_3	-11	0	-	0	0	.
chr2	215062151	215062152	chr2:215062152:G:C	rs35929274	G	C	C	SOX2_HMG_3	-20	0	+	0	0	.
chr2	215062162	215062163	chr2:215062163:T:A	rs7586353	T	A	A	SOX2_HMG_3	-9	0	+	0	0	.
chr2	215145859	215145860	chr2:215145860:A:C	rs1004303	A	C	C	SOX2_HMG_3	30	0	-	0	0	.
chr2	215347615	215347616	chr2:215347616:T:C	rs4673993	T	C	T	SOX2_HMG_3	-18	0	+	0	0	.
chr2	215398612	215398613	chr2:215398613:G:A	rs1525352	G	A	-	SOX2_HMG_3	0	1	+	3.111140888611599	2.8905466095263055	GATCAAGGGGATTGAGT
chr2	215398642	215398643	chr2:215398643:G:A	rs1525351	G	A	G	SOX2_HMG_3	30	0	+	0	0	.
chr2	215430467	215430468	chr2:215430468:T:G	rs7574485	T	G	T	SOX2_HMG_3	-12	0	+	0	0	.
chr2	215430468	215430469	chr2:215430469:G:T	rs7560554	G	T	G	SOX2_HMG_3	-11	0	+	0	0	.
chr2	215433233	215433234	chr2:215433234:C:A	rs115701521	C	A	C	SOX2_HMG_3	-15	0	+	0	0	.
chr2	215439311	215439312	chr2:215439312:G:A	rs1250228	G	A	G	SOX2_HMG_3	-3	0	+	0	0	.
chr2	215462639	215462640	chr2:215462640:A:T	rs11678988	A	T	A	SOX2_HMG_3	9	1	-	5.382810139664332	3.5242347977176034	CTTCAATGATCTTGAAT
chr2	215487531	215487532	chr2:215487532:A:T	rs11902239	A	T	t	SOX2_HMG_3	-12	0	-	0	0	.
chr2	215658477	215658478	chr2:215658478:C:G	rs13402978	C	G	C	SOX2_HMG_3	32	0	-	0	0	.
chr2	215940849	215940850	chr2:215940850:T:C	rs12472599	T	C	t	SOX2_HMG_3	31	0	+	0	0	.
chr2	216032415	216032416	chr2:216032416:T:C	rs7600247	T	C	T	SOX2_HMG_3	19	0	+	0	0	.
chr2	216622898	216622899	chr2:216622899:G:A	rs4674101	G	A	G	SOX2_HMG_3	-19	0	+	0	0	.
chr2	216717205	216717206	chr2:216717206:G:T	rs34825902	G	T	G	SOX2_HMG_3	-3	0	+	0	0	.
chr2	216860750	216860751	chr2:216860751:C:G	rs1179733	C	G	C	SOX2_HMG_3	31	0	-	0	0	.
chr2	217010207	217010208	chr2:217010208:T:C	rs13389571	T	C	C	SOX2_HMG_3	16	1	-	5.120458433705782	5.394146050096053	TATCAATGAGAGTGTAA
chr2	217058881	217058882	chr2:217058882:G:T	rs17835044	G	T	G	SOX2_HMG_3	0	1	+	3.383531504042015	2.5011356242820284	GGTCAATTTAATTGCCA
chr2	217072329	217072330	chr2:217072330:C:T	rs16856893	C	T	C	SOX2_HMG_3	-1	0	+	0	0	.
chr2	217186976	217186977	chr2:217186977:C:T	rs60729218	C	T	C	SOX2_HMG_3	-9	0	+	0	0	.
chr2	217278337	217278338	chr2:217278338:A:G	rs4674140	A	G	A	SOX2_HMG_3	-11	0	-	0	0	.
chr2	217445016	217445017	chr2:217445017:T:G	rs4142171	T	G	C	SOX2_HMG_3	33	0	+	0	0	.
chr2	217535891	217535892	chr2:217535892:C:G	rs4674187	C	G	C	SOX2_HMG_3	32	0	+	0	0	.
chr2	217849962	217849963	chr2:217849963:A:C	rs3791978	A	C	C	SOX2_HMG_3	32	0	-	0	0	.
chr2	218298585	218298586	chr2:218298586:T:C	rs78757285	T	C	T	SOX2_HMG_3	18	0	+	0	0	.
chr2	218316058	218316059	chr2:218316059:G:A	rs115439662	G	A	G	SOX2_HMG_3	-18	0	+	0	0	.
chr2	218316107	218316108	chr2:218316108:G:A	rs146094174	G	A	G	SOX2_HMG_3	31	0	+	0	0	.
chr2	218317173	218317174	chr2:218317174:C:T	rs10932773	C	T	T	SOX2_HMG_3	-3	0	+	0	0	.
chr2	218318024	218318025	chr2:218318025:T:C	rs6741757	T	C	T	SOX2_HMG_3	14	1	-	3.4745086921350476	-0.7073689251660717	AATCACTGGTGGTGATG
chr2	218706024	218706025	chr2:218706025:G:A	rs6751716	G	A	G	SOX2_HMG_3	-15	0	+	0	0	.
chr2	219033003	219033004	chr2:219033004:C:G	rs7572866	C	G	C	SOX2_HMG_3	-13	0	+	0	0	.
chr2	219056477	219056478	chr2:219056478:T:C	rs3100776	T	C	T	SOX2_HMG_3	-15	0	+	0	0	.
chr2	219309800	219309801	chr2:219309801:A:G	rs6436133	A	G	G	SOX2_HMG_3	17	0	+	0	0	.
chr2	219967913	219967914	chr2:219967914:G:A	rs6706508	G	A	G	SOX2_HMG_3	31	0	+	0	0	.
chr2	220039951	220039952	chr2:220039952:A:G	rs6436187	A	G	G	SOX2_HMG_3	-20	0	+	0	0	.
chr2	220062422	220062423	chr2:220062423:G:A	rs730833	G	A	A	SOX2_HMG_3	-8	0	-	0	0	.
chr2	220154736	220154737	chr2:220154737:G:A	rs10932835	G	A	A	SOX2_HMG_3	22	0	-	0	0	.
chr2	220179349	220179350	chr2:220179350:C:T	rs10932836	C	T	C	SOX2_HMG_3	32	0	-	0	0	.
chr2	220179376	220179377	chr2:220179377:T:C	rs77568105	T	C	T	SOX2_HMG_3	5	1	-	7.963680150649985	1.0549253713347646	GGCCAATTTCAGTGATG
chr2	220224315	220224316	chr2:220224316:C:T	rs77042353	C	T	C	SOX2_HMG_3	21	0	+	0	0	.
chr2	220317743	220317744	chr2:220317744:A:G	rs1454563	A	G	A	SOX2_HMG_3	6	1	-	3.4834721298582405	-3.42528264945698	GAGCAATAGTCTTGAGA
chr2	220333698	220333699	chr2:220333699:A:G	rs34044598	A	G	A	SOX2_HMG_3	5	1	+	6.471560602129082	-0.4371941771861385	GATCAATTCTACTGTTA
chr2	220733415	220733416	chr2:220733416:T:C	rs17675314	T	C	T	SOX2_HMG_3	11	1	+	5.459664854824346	-1.2330266434080008	AGGCAATGAAATTGACC
chr2	220896398	220896399	chr2:220896399:G:A	rs114710954	G	A	g	SOX2_HMG_3	24	0	+	0	0	.
chr2	220963100	220963101	chr2:220963101:G:A	rs1435178	G	A	G	SOX2_HMG_3	-12	0	-	0	0	.
chr2	221202587	221202588	chr2:221202588:T:C	rs1835810	T	C	C	SOX2_HMG_3	8	1	-	3.1827812427493436	4.031825190112973	GATCAAGGACTTTGATA
chr2	221606795	221606796	chr2:221606796:A:G	rs2680837	A	G	G	SOX2_HMG_3	6	1	-	8.106607638544743	1.1978528592295232	GGTCTATGTTAGTGATT
chr2	221849157	221849158	chr2:221849158:G:A	rs6706361	G	A	G	SOX2_HMG_3	-19	0	+	0	0	.
chr2	222085957	222085958	chr2:222085958:G:A	rs348998	G	A	G	SOX2_HMG_3	-3	0	-	0	0	.
chr2	222432562	222432563	chr2:222432563:A:G	rs4674649	A	G	A	SOX2_HMG_3	11	1	-	3.373301895744042	-3.3193896024883047	GAGCAATTCGATTGAGT
chr2	222878423	222878424	chr2:222878424:C:T	rs180877038	C	T	C	SOX2_HMG_3	7	1	-	4.517639465348749	1.7888523447874152	CAGCAATGACATTAAAG
chr2	223076103	223076104	chr2:223076104:T:C	rs192648394	T	C	T	SOX2_HMG_3	5	1	+	5.697308939383997	5.697308939383997	GCTCATTGTTAGTGAAT
chr2	223076801	223076802	chr2:223076802:G:A	rs77573952	G	A	G	SOX2_HMG_3	0	1	+	3.0629696131712123	2.8423753340859186	GGTCAATGCAAGTCACA
chr2	223470763	223470764	chr2:223470764:A:G	rs111681120	A	G	A	SOX2_HMG_3	1	1	+	3.399251864205098	1.5676042741258076	AAGAAATGGTAGTGACA
chr2	223470782	223470783	chr2:223470783:C:T	rs719139	C	T	T	SOX2_HMG_3	20	0	+	0	0	.
chr2	223688800	223688801	chr2:223688801:A:C	rs113884461	A	C	A	SOX2_HMG_3	4	1	+	5.358684305053527	-1.550070474261693	AAGCAATGATAATGAGA
chr2	223747630	223747631	chr2:223747631:T:C	rs649569	T	C	T	SOX2_HMG_3	-4	0	+	0	0	.
chr2	223747635	223747636	chr2:223747636:G:A	rs76924583	G	A	G	SOX2_HMG_3	1	1	+	7.406250349471984	9.237897939551274	CGTGAATGGTATTGAAT
chr2	224219855	224219856	chr2:224219856:T:G	rs16865681	T	G	T	SOX2_HMG_3	-2	0	-	0	0	.
chr2	224223111	224223112	chr2:224223112:G:A	rs6717510	G	A	G	SOX2_HMG_3	35	0	+	0	0	.
chr2	224294732	224294733	chr2:224294733:T:C	rs17178608	T	C	T	SOX2_HMG_3	-4	0	-	0	0	.
chr2	224433855	224433856	chr2:224433856:G:A	rs1265559	G	A	G	SOX2_HMG_3	32	0	-	0	0	.
chr2	224437013	224437014	chr2:224437014:T:G	rs6743392	T	G	G	SOX2_HMG_3	5	1	-	4.416610543234215	-2.492144236081005	ACTCAATTTTATGGAGT
chr2	225011087	225011088	chr2:225011088:T:C	rs75071128	T	C	T	SOX2_HMG_3	24	0	+	0	0	.
chr2	225032645	225032646	chr2:225032646:T:C	rs281545	T	C	C	SOX2_HMG_3	19	0	-	0	0	.
chr2	225087177	225087178	chr2:225087178:C:T	rs4673130	C	T	C	SOX2_HMG_3	29	0	-	0	0	.
chr2	225272431	225272432	chr2:225272432:A:T	rs60447174	A	T	A	SOX2_HMG_3	-11	0	-	0	0	.
chr2	225283362	225283363	chr2:225283363:G:A	rs72966663	G	A	G	SOX2_HMG_3	36	0	-	0	0	.
chr2	225949185	225949186	chr2:225949186:T:C	rs1589153	T	C	C	SOX2_HMG_3	18	0	-	0	0	.
chr2	226214027	226214028	chr2:226214028:C:T	rs1108739	C	T	C	SOX2_HMG_3	16	1	-	3.1505938444157384	2.876906228025467	GAAAAATTCCAGTGATG
chr2	226426551	226426552	chr2:226426552:T:C	rs13398640	T	C	T	SOX2_HMG_3	-2	0	+	0	0	.
chr2	226555036	226555037	chr2:226555037:T:C	rs60532138	T	C	T	SOX2_HMG_3	5	1	-	4.618944599380811	-2.2898101799344084	TAACTATGGTAGTGAAG
chr2	226609713	226609714	chr2:226609714:G:T	rs1273810	G	T	G	SOX2_HMG_3	-16	0	-	0	0	.
chr2	226868768	226868769	chr2:226868769:C:T	rs16822814	C	T	T	SOX2_HMG_3	0	1	+	5.360367611346707	5.223038633298042	CATAAATGACAGTGACG
chr2	226956303	226956304	chr2:226956304:A:T	rs4129886	A	T	A	SOX2_HMG_3	9	1	-	3.57522327065037	1.7166479287036411	CATCAATGCTAATAATA
chr2	226956304	226956305	chr2:226956305:G:A	rs142595814	G	A	G	SOX2_HMG_3	8	1	-	3.57522327065037	4.446959623286232	CATCAATGCTAATAATA
chr2	227000159	227000160	chr2:227000160:A:G	rs10189579	A	G	A	SOX2_HMG_3	26	0	+	0	0	.
chr2	227370962	227370963	chr2:227370963:T:C	rs201095743	T	C	T	SOX2_HMG_3	12	1	+	4.938406323801264	-1.9703484555139563	TGTCAAGGACATTGTTG
chr2	227463201	227463202	chr2:227463202:C:T	rs4673199	C	T	T	SOX2_HMG_3	5	1	+	4.119442215022183	4.119442215022183	AGTCACTGGTATTGGGG
chr2	227508239	227508240	chr2:227508240:T:C	rs10182259	T	C	T	SOX2_HMG_3	35	0	-	0	0	.
chr2	227775457	227775458	chr2:227775458:T:G	rs6759404	T	G	G	SOX2_HMG_3	1	1	-	6.426884287465025	3.4208404349417103	GATCATTTGAAGTGATA
chr2	227775473	227775474	chr2:227775474:G:T	rs6744322	G	T	G	SOX2_HMG_3	-15	0	-	0	0	.
chr2	227862891	227862892	chr2:227862892:C:G	rs931764443	C	G	C	SOX2_HMG_3	30	0	-	0	0	.
chr2	227882159	227882160	chr2:227882160:T:G	rs4973006	T	G	T	SOX2_HMG_3	-14	0	+	0	0	.
chr2	228443929	228443930	chr2:228443930:G:A	rs2194551	G	A	G	SOX2_HMG_3	-7	0	+	0	0	.
chr2	228443937	228443938	chr2:228443938:G:C	rs58276054	G	C	G	SOX2_HMG_3	1	1	+	4.389390614668431	3.214994352224407	AGTCAAAGCAATTGTTA
chr2	228445370	228445371	chr2:228445371:C:G	rs60799555	C	G	C	SOX2_HMG_3	-15	0	+	0	0	.
chr2	228613870	228613871	chr2:228613871:T:A	rs2301	T	A	T	SOX2_HMG_3	-17	0	+	0	0	.
chr2	228818795	228818796	chr2:228818796:T:C	rs2103259	T	C	T	SOX2_HMG_3	0	1	+	5.458588030389465	5.595917008438129	TGTCAATTTTATTTAGA
chr2	228875112	228875113	chr2:228875113:G:T	rs11893007	G	T	G	SOX2_HMG_3	20	0	-	0	0	.
chr2	228964747	228964748	chr2:228964748:G:A	rs17475282	G	A	G	SOX2_HMG_3	-14	0	-	0	0	.
chr2	229481990	229481991	chr2:229481991:C:A	rs12476610	C	A	A	SOX2_HMG_3	-17	0	+	0	0	.
chr2	230170822	230170823	chr2:230170823:C:T	rs140248145	C	T	C	SOX2_HMG_3	-4	0	-	0	0	.
chr2	230179147	230179148	chr2:230179148:T:G	rs967007	T	G	G	SOX2_HMG_3	-7	0	-	0	0	.
chr2	230377483	230377484	chr2:230377484:G:A	rs13012615	G	A	A	SOX2_HMG_3	34	0	+	0	0	.
chr2	230445904	230445905	chr2:230445905:A:G	rs999888	A	G	G	SOX2_HMG_3	-13	0	-	0	0	.
chr2	230565668	230565669	chr2:230565669:A:G	rs7587870	A	G	.	SOX2_HMG_3	9	1	-	2.0628230450665823	1.2561529111295364	GCAGAATGGTAGTGAGG
chr2	230599991	230599992	chr2:230599992:G:T	rs74269035	G	T	G	SOX2_HMG_3	13	1	+	2.163971540942149	-4.744783238373071	GCTCCATGTCATTGGTC
chr2	230615702	230615703	chr2:230615703:T:C	rs10190300	T	C	t	SOX2_HMG_3	32	0	-	0	0	.
chr2	230615707	230615708	chr2:230615708:A:G	rs545406821	A	G	a	SOX2_HMG_3	27	0	-	0	0	.
chr2	230664193	230664194	chr2:230664194:C:T	rs7426302	C	T	C	SOX2_HMG_3	-20	0	+	0	0	.
chr2	230664194	230664195	chr2:230664195:A:T	rs116050543	A	T	A	SOX2_HMG_3	-19	0	+	0	0	.
chr2	230664202	230664203	chr2:230664203:C:T	rs138537309	C	T	C	SOX2_HMG_3	-11	0	+	0	0	.
chr2	230777921	230777922	chr2:230777922:T:C	rs147414467	T	C	T	SOX2_HMG_3	25	0	-	0	0	.
chr2	230942920	230942921	chr2:230942921:C:T	rs73093112	C	T	C	SOX2_HMG_3	0	1	-	1.5155322350628024	1.2949379559775087	GTTCATTGGCAATGATG
chr2	230964792	230964793	chr2:230964793:C:T	rs2089662	C	T	-	SOX2_HMG_3	26	0	-	0	0	.
chr2	231118235	231118236	chr2:231118236:T:C	rs60707561	T	C	T	SOX2_HMG_3	9	1	+	2.885362243972048	2.078692110035002	AATAAATGTTAGTGCTT
chr2	231187021	231187022	chr2:231187022:A:T	rs55820201	A	T	A	SOX2_HMG_3	15	1	-	3.4986184945182375	2.263716057801515	AATCAAAGTGATTGATC
chr2	231227587	231227588	chr2:231227588:C:T	rs16827879	C	T	T	SOX2_HMG_3	13	1	-	3.238532042791368	-3.6702227365238524	AAGCAATGGCAGGGAGT
chr2	231330574	231330575	chr2:231330575:A:G	rs1669078	A	G	G	SOX2_HMG_3	-19	0	-	0	0	.
chr2	231356901	231356902	chr2:231356902:C:T	rs61485321	C	T	C	SOX2_HMG_3	-6	0	-	0	0	.
chr2	231542301	231542302	chr2:231542302:C:T	rs11695846	C	T	C	SOX2_HMG_3	-7	0	-	0	0	.
chr2	231546564	231546565	chr2:231546565:A:G	rs988609665	A	G	A	SOX2_HMG_3	10	1	+	5.830204990892918	-1.0785497884223032	GGTCAATGTTAATGTTC
chr2	232260744	232260745	chr2:232260745:G:A	rs12622345	G	A	G	SOX2_HMG_3	3	1	-	6.828697834230688	-0.08005694508453343	AATCAATACTCTTGAAA
chr2	232343266	232343267	chr2:232343267:C:G	rs1125045	C	G	C	SOX2_HMG_3	20	0	-	0	0	.
chr2	232533504	232533505	chr2:232533505:G:A	rs3828246	G	A	G	SOX2_HMG_3	11	1	+	2.8983787727681705	-2.3772327562442284	AATCAATGACAGAGTCA
chr2	232695592	232695593	chr2:232695593:A:T	rs62193269	A	T	T	SOX2_HMG_3	-1	0	+	0	0	.
chr2	232745271	232745272	chr2:232745272:C:G	rs11892326	C	G	C	SOX2_HMG_3	-1	0	+	0	0	.
chr2	232796135	232796136	chr2:232796136:G:A	rs2305138	G	A	G	SOX2_HMG_3	33	0	-	0	0	.
chr2	232966804	232966805	chr2:232966805:G:C	rs56367947	G	C	c	SOX2_HMG_3	36	0	-	0	0	.
chr2	232966841	232966842	chr2:232966842:C:A	rs144793754	C	A	C	SOX2_HMG_3	-1	0	-	0	0	.
chr2	232974528	232974529	chr2:232974529:C:T	rs6748986	C	T	C	SOX2_HMG_3	7	1	-	2.7969227533962506	0.06813563283491564	GATAAGTGGCATTGAAA
chr2	233139304	233139305	chr2:233139305:T:C	rs886975487	T	C	T	SOX2_HMG_3	6	1	+	2.9148421661824253	-3.993912613132794	TGTCAATGGATGTGACA
chr2	233249041	233249042	chr2:233249042:C:T	rs56049444	C	T	C	SOX2_HMG_3	26	0	+	0	0	.
chr2	233297793	233297794	chr2:233297794:T:C	rs73998351	T	C	G	SOX2_HMG_3	23	0	+	0	0	.
chr2	233640167	233640168	chr2:233640168:A:G	rs2741034	A	G	A	SOX2_HMG_3	8	1	-	5.39421957925956	4.522483226623698	AAACAATTTTAGTGGGA
chr2	233675199	233675200	chr2:233675200:G:A	rs12615708	G	A	g	SOX2_HMG_3	-2	0	+	0	0	.
chr2	233801649	233801650	chr2:233801650:A:G	rs28899491	A	G	A	SOX2_HMG_3	5	1	+	4.74259064932564	-2.166164129989582	CACCTATGTTATTGAGG
chr2	234022654	234022655	chr2:234022655:G:A	rs17865686	G	A	G	SOX2_HMG_3	-3	0	-	0	0	.
chr2	234026507	234026508	chr2:234026508:G:A	rs17864789	G	A	G	SOX2_HMG_3	28	0	-	0	0	.
chr2	234499175	234499176	chr2:234499176:T:C	rs6735314	T	C	T	SOX2_HMG_3	-20	0	+	0	0	.
chr2	234609895	234609896	chr2:234609896:C:A	rs2386505	C	A	-	SOX2_HMG_3	0	1	+	4.178558508177087	4.703031130803116	CAACAGTGTAATTGAAA
chr2	234988417	234988418	chr2:234988418:A:C	rs10176321	A	C	A	SOX2_HMG_3	7	1	-	4.784809892775004	6.82952039750854	TGGCAATTCAAGTGAAA
chr2	235024649	235024650	chr2:235024650:A:G	rs76797541	A	G	A	SOX2_HMG_3	36	0	+	0	0	.
chr2	235170040	235170041	chr2:235170041:A:T	rs72981340	A	T	A	SOX2_HMG_3	28	0	+	0	0	.
chr2	235170617	235170618	chr2:235170618:G:A	rs4311020	G	A	A	SOX2_HMG_3	-9	0	-	0	0	.
chr2	235263646	235263647	chr2:235263647:C:T	rs10929113	C	T	C	SOX2_HMG_3	7	1	-	2.7789032565402576	0.05011613597892278	GAGCCATGGAATTGTTT
chr2	235378621	235378622	chr2:235378622:G:A	rs10190128	G	A	A	SOX2_HMG_3	-7	0	+	0	0	.
chr2	235674381	235674382	chr2:235674382:G:T	rs12466302	G	T	T	SOX2_HMG_3	19	0	+	0	0	.
chr2	235826951	235826952	chr2:235826952:G:A	rs554811255	G	A	G	SOX2_HMG_3	-14	0	-	0	0	.
chr2	235827708	235827709	chr2:235827709:A:T	rs62190882	A	T	A	SOX2_HMG_3	1	1	-	3.214166175127142	6.220210027650458	GTTCAATGCCGGTGACG
chr2	235827709	235827710	chr2:235827710:C:T	rs12472411	C	T	T	SOX2_HMG_3	0	1	-	3.214166175127142	2.9935718960418485	GTTCAATGCCGGTGACG
chr2	235918724	235918725	chr2:235918725:G:A	rs11690665	G	A	G	SOX2_HMG_3	7	1	+	5.876706475930181	3.147919355368846	GTTAAATGTAAGTGATG
chr2	236174433	236174434	chr2:236174434:T:C	rs1921660	T	C	C	SOX2_HMG_3	-8	0	-	0	0	.
chr2	236336400	236336401	chr2:236336401:A:C	rs62192360	A	C	A	SOX2_HMG_3	9	1	-	2.676348453118747	-3.7630019179813505	CATGAATGGTAGTAATA
chr2	236501867	236501868	chr2:236501868:T:C	rs11885826	T	C	C	SOX2_HMG_3	26	0	-	0	0	.
chr2	236501908	236501909	chr2:236501909:G:C	rs115373549	G	C	G	SOX2_HMG_3	-15	0	-	0	0	.
chr2	236562588	236562589	chr2:236562589:T:C	rs57843509	T	C	T	SOX2_HMG_3	33	0	+	0	0	.
chr2	236587546	236587547	chr2:236587547:C:T	rs12692190	C	T	T	SOX2_HMG_3	24	0	+	0	0	.
chr2	236592829	236592830	chr2:236592830:G:A	rs573537832	G	A	G	SOX2_HMG_3	-4	0	-	0	0	.
chr2	236715727	236715728	chr2:236715728:G:A	chr2:236715728:G:A	G	A	G	SOX2_HMG_3	-14	0	+	0	0	.
chr2	236833628	236833629	chr2:236833629:A:C	rs146693707	A	C	A	SOX2_HMG_3	32	0	-	0	0	.
chr2	236861798	236861799	chr2:236861799:T:C	rs7578264	T	C	T	SOX2_HMG_3	-15	0	+	0	0	.
chr2	236941291	236941292	chr2:236941292:T:G	rs531666881	T	G	T	SOX2_HMG_3	-11	0	+	0	0	.
chr2	236941294	236941295	chr2:236941295:G:A	rs548293008	G	A	G	SOX2_HMG_3	-8	0	+	0	0	.
chr2	236944674	236944675	chr2:236944675:G:A	rs58491621	G	A	G	SOX2_HMG_3	3	1	-	7.492646953432871	0.5838921741176506	AATCAATGACAGAGAAG
chr2	237144686	237144687	chr2:237144687:G:A	rs72975882	G	A	G	SOX2_HMG_3	-16	0	-	0	0	.
chr2	237281860	237281861	chr2:237281861:C:T	rs4328586	C	T	T	SOX2_HMG_3	-10	0	+	0	0	.
chr2	237281889	237281890	chr2:237281890:A:T	rs4436910	A	T	A	SOX2_HMG_3	19	0	+	0	0	.
chr2	237452445	237452446	chr2:237452446:C:T	rs7584314	C	T	C	SOX2_HMG_3	10	1	+	2.9404785587368707	2.9404785587368707	GCTCAATGCCCGTGACA
chr2	237452457	237452458	chr2:237452458:G:A	rs75011835	G	A	G	SOX2_HMG_3	22	0	+	0	0	.
chr2	237480148	237480149	chr2:237480149:G:A	rs13390494	G	A	A	SOX2_HMG_3	17	0	-	0	0	.
chr2	237488319	237488320	chr2:237488320:T:C	rs880932	T	C	C	SOX2_HMG_3	-5	0	+	0	0	.
chr2	237488341	237488342	chr2:237488342:C:T	rs72620830	C	T	C	SOX2_HMG_3	17	0	+	0	0	.
chr2	237488342	237488343	chr2:237488343:C:T	rs116186581	C	T	C	SOX2_HMG_3	18	0	+	0	0	.
chr2	237732473	237732474	chr2:237732474:C:T	rs56182016	C	T	C	SOX2_HMG_3	2	1	-	8.147600999417525	8.147600999417525	CAGCAATTAAAGTGATG
chr2	237770231	237770232	chr2:237770232:A:G	rs6719679	A	G	G	SOX2_HMG_3	5	1	+	4.0361803855525356	-2.8725743937626844	AAGCCATGGAATTGAAT
chr2	237903521	237903522	chr2:237903522:A:C	rs4663805	A	C	C	SOX2_HMG_3	-4	0	-	0	0	.
chr2	238142908	238142909	chr2:238142909:T:C	rs935411	T	C	C	SOX2_HMG_3	-12	0	+	0	0	.
chr2	238142933	238142934	chr2:238142934:G:A	rs76664545	G	A	A	SOX2_HMG_3	13	1	+	1.9797909873941384	-4.928963791921082	CAGCAAGGCCAGTGAGT
chr2	238213091	238213092	chr2:238213092:T:C	rs4663863	T	C	T	SOX2_HMG_3	-8	0	-	0	0	.
chr2	238441845	238441846	chr2:238441846:T:C	rs57080728	T	C	T	SOX2_HMG_3	6	1	+	1.8514404338420345	-5.057314345473184	GAGCAGTGTGATTGATG
chr2	238732352	238732353	chr2:238732353:A:T	rs4663952	A	T	T	SOX2_HMG_3	35	0	+	0	0	.
chr2	238732485	238732486	chr2:238732486:A:G	rs4663953	A	G	A	SOX2_HMG_3	-18	0	-	0	0	.
chr2	238796761	238796762	chr2:238796762:G:A	rs56987405	G	A	G	SOX2_HMG_3	27	0	+	0	0	.
chr2	239123653	239123654	chr2:239123654:T:C	rs3791446	T	C	C	SOX2_HMG_3	4	1	-	1.6707947746477634	-5.237960004667457	GGTCAAAGGCTTTGATT
chr2	239299995	239299996	chr2:239299996:C:T	rs67432149	C	T	C	SOX2_HMG_3	-14	0	+	0	0	.
chr2	239300014	239300015	chr2:239300015:A:G	rs115839234	A	G	A	SOX2_HMG_3	5	1	+	1.8993373574619996	-5.009417421853218	AATCCATGCCACTGAGG
chr2	239455302	239455303	chr2:239455303:A:C	rs567272355	A	C	A	SOX2_HMG_3	23	0	-	0	0	.
chr2	239455308	239455309	chr2:239455309:A:C	rs35416677	A	C	A	SOX2_HMG_3	17	0	-	0	0	.
chr2	239533488	239533489	chr2:239533489:T:A	rs1796446	T	A	A	SOX2_HMG_3	35	0	-	0	0	.
chr2	239533541	239533542	chr2:239533542:A:G	rs2952667	A	G	G	SOX2_HMG_3	-18	0	-	0	0	.
chr2	239609186	239609187	chr2:239609187:G:T	rs4852097	G	T	T	SOX2_HMG_3	21	0	-	0	0	.
chr2	239685762	239685763	chr2:239685763:A:G	rs12989415	A	G	A	SOX2_HMG_3	-6	0	-	0	0	.
chr2	239685773	239685774	chr2:239685774:C:T	rs888098698	C	T	C	SOX2_HMG_3	-17	0	-	0	0	.
chr2	239748350	239748351	chr2:239748351:G:A	rs1530009	G	A	G	SOX2_HMG_3	16	1	+	3.354266856970844	3.0805792405805725	GAAGAATGTCAGTGTTG
chr2	239757864	239757865	chr2:239757865:C:T	rs74218169	C	T	C	SOX2_HMG_3	29	0	-	0	0	.
chr2	239763680	239763681	chr2:239763681:A:G	chr2:239763681:A:G	A	G	A	SOX2_HMG_3	5	1	+	2.4503949525214077	-4.458359826793812	CAGCAATGCCAGCGATC
chr2	239811056	239811057	chr2:239811057:A:G	rs62183198	A	G	A	SOX2_HMG_3	14	1	+	5.806579282256328	1.6247016649552077	GCTCAATGCCATTTAGG
chr2	240044095	240044096	chr2:240044096:G:A	rs141125489	G	A	g	SOX2_HMG_3	18	0	-	0	0	.
chr2	240055798	240055799	chr2:240055799:C:T	rs12471071	C	T	C	SOX2_HMG_3	3	1	+	3.5191714326109893	-3.3895833467042316	GCTCAATGTTAATGGGG
chr2	240198682	240198683	chr2:240198683:A:G	rs73104132	A	G	-	SOX2_HMG_3	-18	0	-	0	0	.
chr2	240525348	240525349	chr2:240525349:G:T	rs4384788	G	T	T	SOX2_HMG_3	-13	0	-	0	0	.
chr2	240952584	240952585	chr2:240952585:A:C	rs4610049	A	C	C	SOX2_HMG_3	-8	0	+	0	0	.
chr2	240952591	240952592	chr2:240952592:G:A	rs4605365	G	A	G	SOX2_HMG_3	-1	0	+	0	0	.
chr2	240972598	240972599	chr2:240972599:T:C	rs11898539	T	C	T	SOX2_HMG_3	14	1	-	5.260298790207029	1.0784211729059103	GGTCAATGTCAGAGACG
chr2	241028027	241028028	chr2:241028028:G:A	rs57575374	G	A	G	SOX2_HMG_3	-15	0	+	0	0	.
chr2	241279592	241279593	chr2:241279593:C:T	rs116418494	C	T	C	SOX2_HMG_3	-5	0	-	0	0	.
chr2	241538985	241538986	chr2:241538986:T:C	rs79995252	T	C	C	SOX2_HMG_3	29	0	+	0	0	.
chr2	241896378	241896379	chr2:241896379:A:C	rs77365138	A	C	.	SOX2_HMG_3	-7	0	+	0	0	.
chr2	241896390	241896391	chr2:241896391:A:C	rs7606520	A	C	.	SOX2_HMG_3	5	1	+	4.570706990073363	-2.338047789241858	ACTCAAGGGCAGTGATC
chr2	241896400	241896401	chr2:241896401:T:C	rs7600158	T	C	.	SOX2_HMG_3	15	1	+	4.570706990073363	1.7279978338965052	ACTCAAGGGCAGTGATC
chr2	242018793	242018794	chr2:242018794:A:G	rs7422022	A	G	.	SOX2_HMG_3	28	0	+	0	0	.
chr2	242037348	242037349	chr2:242037349:C:T	rs111884257	C	T	.	SOX2_HMG_3	29	0	-	0	0	.
chr2	242037376	242037377	chr2:242037377:T:C	rs12477174	T	C	.	SOX2_HMG_3	1	1	-	6.962829087924215	5.131181497844922	CAACAATACCAGTGAGG
chr20	145643	145644	chr20:145644:T:C	rs77106211	T	C	.	SOX2_HMG_3	-9	0	-	0	0	.
chr20	291552	291553	chr20:291553:G:A	rs73572454	G	A	G	SOX2_HMG_3	0	1	-	2.5807456441881134	2.4434166661394494	CACCAATGATGTTGACG
chr20	882409	882410	chr20:882410:A:G	rs59538275	A	G	A	SOX2_HMG_3	21	0	+	0	0	.
chr20	917574	917575	chr20:917575:T:C	rs540995	T	C	C	SOX2_HMG_3	17	0	+	0	0	.
chr20	1042068	1042069	chr20:1042069:C:A	rs6056813	C	A	C	SOX2_HMG_3	35	0	-	0	0	.
chr20	1042098	1042099	chr20:1042099:A:G	rs4816166	A	G	A	SOX2_HMG_3	5	1	-	3.0591223051002245	3.0591223051002245	ACTCATTGTTAGTGGTA
chr20	1212061	1212062	chr20:1212062:T:C	rs73073619	T	C	T	SOX2_HMG_3	34	0	+	0	0	.
chr20	1247724	1247725	chr20:1247725:C:T	rs9653633	C	T	C	SOX2_HMG_3	3	1	+	5.7524865081735745	-1.156268271141645	AGTCTATGAAATTGAAA
chr20	1382389	1382390	chr20:1382390:G:C	rs7274574	G	C	G	SOX2_HMG_3	-11	0	-	0	0	.
chr20	1875737	1875738	chr20:1875738:C:T	rs79271932	C	T	C	SOX2_HMG_3	28	0	-	0	0	.
chr20	2045229	2045230	chr20:2045230:A:T	rs1418046	A	T	A	SOX2_HMG_3	16	1	+	6.004192006125379	5.47480918073946	ACTGAATGATATTGAGA
chr20	2108051	2108052	chr20:2108052:A:G	rs6137005	A	G	A	SOX2_HMG_3	28	0	+	0	0	.
chr20	2181024	2181025	chr20:2181025:T:A	rs4813409	T	A	T	SOX2_HMG_3	6	1	+	6.618720586959509	-0.2900341923557116	ATGCAATGGAAGTGAGA
chr20	2181031	2181032	chr20:2181032:G:A	rs4813410	G	A	G	SOX2_HMG_3	13	1	+	6.618720586959509	-0.2900341923557114	ATGCAATGGAAGTGAGA
chr20	2364138	2364139	chr20:2364139:T:G	rs6132554	T	G	T	SOX2_HMG_3	-14	0	+	0	0	.
chr20	2364142	2364143	chr20:2364143:A:C	rs4815161	A	C	A	SOX2_HMG_3	-10	0	+	0	0	.
chr20	2364163	2364164	chr20:2364164:G:A	rs2325841	G	A	A	SOX2_HMG_3	11	1	+	4.389499313036377	-0.8861122159760209	GTTAAATGCCAGTGAGG
chr20	2392979	2392980	chr20:2392980:C:G	rs73071385	C	G	C	SOX2_HMG_3	15	1	-	0.6548263507322251	-0.5205067871770102	GCTCAATGGTTATGAGG
chr20	2393517	2393518	chr20:2393518:T:A	rs2092379	T	A	A	SOX2_HMG_3	19	0	+	0	0	.
chr20	2406933	2406934	chr20:2406934:G:A	rs75376438	G	A	G	SOX2_HMG_3	-1	0	-	0	0	.
chr20	2533483	2533484	chr20:2533484:G:A	rs6036852	G	A	A	SOX2_HMG_3	13	1	+	2.2418621206908194	-4.666892658624401	GATCACTGGCAGTGTCC
chr20	2533911	2533912	chr20:2533912:G:A	rs6076243	G	A	A	SOX2_HMG_3	19	0	+	0	0	.
chr20	2646723	2646724	chr20:2646724:T:C	rs2038246	T	C	T	SOX2_HMG_3	17	0	-	0	0	.
chr20	2658905	2658906	chr20:2658906:G:A	rs367817356	G	A	G	SOX2_HMG_3	7	1	+	5.261171604810341	2.5323844842490058	GGGCAATGTGATTGAGG
chr20	2658923	2658924	chr20:2658924:G:T	rs6037255	G	T	T	SOX2_HMG_3	25	0	+	0	0	.
chr20	2771693	2771694	chr20:2771694:G:A	rs6084164	G	A	G	SOX2_HMG_3	7	1	+	3.9604019124325522	1.2316147918712173	GAGCAGTGCCAGTGAAG
chr20	2832173	2832174	chr20:2832174:A:G	rs6051421	A	G	a	SOX2_HMG_3	23	0	+	0	0	.
chr20	3318580	3318581	chr20:3318581:C:A	rs6037547	C	A	C	SOX2_HMG_3	21	0	-	0	0	.
chr20	3795527	3795528	chr20:3795528:C:T	rs3761218	C	T	T	SOX2_HMG_3	27	0	+	0	0	.
chr20	3989525	3989526	chr20:3989526:C:G	rs17215340	C	G	C	SOX2_HMG_3	17	0	-	0	0	.
chr20	3996677	3996678	chr20:3996678:T:C	rs73086581	T	C	T	SOX2_HMG_3	6	1	+	3.68087391836144	-3.2278808609537806	GGCCAATGTAACTGATG
chr20	4061402	4061403	chr20:4061403:T:C	rs6139280	T	C	.	SOX2_HMG_3	33	0	-	0	0	.
chr20	4224412	4224413	chr20:4224413:T:C	rs3787441	T	C	T	SOX2_HMG_3	10	1	-	3.2805353503609993	-3.6282194289542207	GGTCCATGGTATGGATG
chr20	4224424	4224425	chr20:4224425:A:G	rs6084663	A	G	A	SOX2_HMG_3	-2	0	-	0	0	.
chr20	4251727	4251728	chr20:4251728:A:G	rs11698989	A	G	A	SOX2_HMG_3	6	1	-	4.556875344695564	-2.3518794346196557	CAGCAATTGCATAGATG
chr20	4554435	4554436	chr20:4554436:G:T	rs115489289	G	T	G	SOX2_HMG_3	-3	0	+	0	0	.
chr20	4681326	4681327	chr20:4681327:G:C	rs145341944	G	C	G	SOX2_HMG_3	-5	0	-	0	0	.
chr20	4721102	4721103	chr20:4721103:A:C	rs73585009	A	C	A	SOX2_HMG_3	25	0	-	0	0	.
chr20	4788530	4788531	chr20:4788531:G:C	rs6139553	G	C	G	SOX2_HMG_3	30	0	+	0	0	.
chr20	4788536	4788537	chr20:4788537:G:A	rs2422987	G	A	A	SOX2_HMG_3	36	0	+	0	0	.
chr20	5043590	5043591	chr20:5043591:C:T	rs404678	C	T	C	SOX2_HMG_3	9	1	+	2.557176151992644	3.36384628592969	CAGCAATGTCCTTGGTG
chr20	5357976	5357977	chr20:5357977:A:G	rs35963343	A	G	A	SOX2_HMG_3	-15	0	+	0	0	.
chr20	5357989	5357990	chr20:5357990:T:C	rs4815797	T	C	T	SOX2_HMG_3	-2	0	+	0	0	.
chr20	5510647	5510648	chr20:5510648:T:C	rs76162629	T	C	C	SOX2_HMG_3	-5	0	+	0	0	.
chr20	5804036	5804037	chr20:5804037:G:A	rs4813780	G	A	G	SOX2_HMG_3	-12	0	-	0	0	.
chr20	5829850	5829851	chr20:5829851:A:G	rs237075	A	G	A	SOX2_HMG_3	-3	0	-	0	0	.
chr20	5832241	5832242	chr20:5832242:C:T	rs6139850	C	T	C	SOX2_HMG_3	-15	0	+	0	0	.
chr20	5832253	5832254	chr20:5832254:A:T	rs237083	A	T	T	SOX2_HMG_3	-3	0	+	0	0	.
chr20	6054469	6054470	chr20:6054470:C:A	rs149307821	C	A	A	SOX2_HMG_3	-5	0	+	0	0	.
chr20	6077493	6077494	chr20:6077494:C:G	rs113141465	C	G	C	SOX2_HMG_3	8	1	-	5.7392385560655175	5.004970123294317	GTTTAATGGAAGTGATG
chr20	6077505	6077506	chr20:6077506:T:C	rs150191129	T	C	T	SOX2_HMG_3	-4	0	-	0	0	.
chr20	6148620	6148621	chr20:6148621:A:C	rs3897510	A	C	A	SOX2_HMG_3	-13	0	+	0	0	.
chr20	6265157	6265158	chr20:6265158:A:C	rs6117185	A	C	A	SOX2_HMG_3	27	0	+	0	0	.
chr20	6446870	6446871	chr20:6446871:C:T	rs6054255	C	T	C	SOX2_HMG_3	11	1	-	3.932541901011952	-1.3430696280004464	TCGCAATGAAAGTGACA
chr20	6533477	6533478	chr20:6533478:C:T	rs118035811	C	T	C	SOX2_HMG_3	13	1	-	3.5098380276130965	-3.398916751702123	TAAAAATGCCAGTGATT
chr20	6636829	6636830	chr20:6636830:C:T	rs1321433	C	T	T	SOX2_HMG_3	-18	0	+	0	0	.
chr20	6714678	6714679	chr20:6714679:G:T	chr20:6714679:G:T	G	T	G	SOX2_HMG_3	28	0	+	0	0	.
chr20	6941898	6941899	chr20:6941899:A:G	rs73597168	A	G	A	SOX2_HMG_3	28	0	+	0	0	.
chr20	7085708	7085709	chr20:7085709:C:T	rs148050731	C	T	C	SOX2_HMG_3	-9	0	-	0	0	.
chr20	7195708	7195709	chr20:7195709:A:G	rs16993133	A	G	G	SOX2_HMG_3	2	1	+	4.495086001892513	4.495086001892513	TAACAATGCCATTCAAG
chr20	7463416	7463417	chr20:7463417:C:A	rs2326929	C	A	c	SOX2_HMG_3	-9	0	+	0	0	.
chr20	7477632	7477633	chr20:7477633:A:T	rs6086059	A	T	A	SOX2_HMG_3	0	1	-	2.905635636599392	3.5674372372740866	TTGCAATGTCAGTGGTC
chr20	7691337	7691338	chr20:7691338:C:T	rs6038921	C	T	T	SOX2_HMG_3	-4	0	-	0	0	.
chr20	7766290	7766291	chr20:7766291:G:A	rs73593977	G	A	A	SOX2_HMG_3	26	0	-	0	0	.
chr20	7888808	7888809	chr20:7888809:T:C	rs2294305	T	C	T	SOX2_HMG_3	6	1	+	7.4762318414395645	0.5674770621243436	CATCAGTGGAATTGAGA
chr20	7923930	7923931	chr20:7923931:C:T	rs2247673	C	T	T	SOX2_HMG_3	-15	0	+	0	0	.
chr20	8038655	8038656	chr20:8038656:C:T	rs8184867	C	T	C	SOX2_HMG_3	-3	0	+	0	0	.
chr20	8073904	8073905	chr20:8073905:C:T	rs6140524	C	T	C	SOX2_HMG_3	15	1	-	4.4511025452621	4.883576126813001	CCTGAATGCTAGTGAGG
chr20	8096147	8096148	chr20:8096148:A:G	rs6055528	A	G	A	SOX2_HMG_3	31	0	+	0	0	.
chr20	8156038	8156039	chr20:8156039:A:G	rs62198530	A	G	G	SOX2_HMG_3	-14	0	-	0	0	.
chr20	8212391	8212392	chr20:8212392:C:A	rs6077327	C	A	C	SOX2_HMG_3	15	1	-	5.321120110524803	6.988496128792426	TGTCAATTGTATTTAGA
chr20	8473558	8473559	chr20:8473559:A:G	rs2294552	A	G	G	SOX2_HMG_3	-7	0	-	0	0	.
chr20	8528219	8528220	chr20:8528220:A:G	rs114109931	A	G	A	SOX2_HMG_3	21	0	+	0	0	.
chr20	8528221	8528222	chr20:8528222:G:A	rs722663	G	A	G	SOX2_HMG_3	23	0	+	0	0	.
chr20	8536047	8536048	chr20:8536048:C:T	rs2423364	C	T	T	SOX2_HMG_3	-2	0	-	0	0	.
chr20	8569889	8569890	chr20:8569890:G:A	rs6086505	G	A	G	SOX2_HMG_3	-11	0	-	0	0	.
chr20	8602731	8602732	chr20:8602732:G:T	rs542686766	G	T	G	SOX2_HMG_3	13	1	+	3.1523224102667124	-3.756432369048507	CTTTAATTACAGTGATG
chr20	8718828	8718829	chr20:8718829:A:G	rs6056033	A	G	A	SOX2_HMG_3	-20	0	+	0	0	.
chr20	8751753	8751754	chr20:8751754:T:C	rs6056062	T	C	C	SOX2_HMG_3	34	0	+	0	0	.
chr20	8851593	8851594	chr20:8851594:T:C	rs111933672	T	C	T	SOX2_HMG_3	33	0	-	0	0	.
chr20	8858621	8858622	chr20:8858622:A:G	rs17380559	A	G	A	SOX2_HMG_3	6	1	-	3.157663855784108	-3.7510909235311125	CATCAGTGGAAGTGACC
chr20	8946085	8946086	chr20:8946086:A:G	rs6118394	A	G	A	SOX2_HMG_3	-13	0	-	0	0	.
chr20	9156776	9156777	chr20:9156777:A:C	rs6118508	A	C	A	SOX2_HMG_3	5	1	+	6.382166771970749	-0.526588007344472	CATTAATTTTATTGTTA
chr20	9229357	9229358	chr20:9229358:A:G	rs73093829	A	G	A	SOX2_HMG_3	16	1	-	7.557118450642448	6.360346397502094	AATCAATTTTAGTGGCT
chr20	9375848	9375849	chr20:9375849:A:G	rs2299675	A	G	A	SOX2_HMG_3	18	0	-	0	0	.
chr20	9573477	9573478	chr20:9573478:T:C	rs2026339	T	C	C	SOX2_HMG_3	-20	0	+	0	0	.
chr20	9617314	9617315	chr20:9617315:C:T	rs1030493561	C	T	C	SOX2_HMG_3	33	0	-	0	0	.
chr20	9887886	9887887	chr20:9887887:T:C	rs6056972	T	C	T	SOX2_HMG_3	11	1	+	5.176349186857422	-1.5163423113749253	CCTTAATGGAATTGAAG
chr20	9985567	9985568	chr20:9985568:A:C	rs55641365	A	C	C	SOX2_HMG_3	-7	0	-	0	0	.
chr20	9986287	9986288	chr20:9986288:C:T	rs59540965	C	T	C	SOX2_HMG_3	-20	0	+	0	0	.
chr20	10109934	10109935	chr20:10109935:G:T	rs111722573	G	T	G	SOX2_HMG_3	9	1	-	3.5727579142146	2.520852706204918	AAGCAACTGCATTGAAA
chr20	10115160	10115161	chr20:10115161:T:C	chr20:10115161:T:C	T	C	T	SOX2_HMG_3	6	1	+	3.935642841272286	-2.973111938042935	GTTAAATGTAAGTGAGA
chr20	10430953	10430954	chr20:10430954:T:C	rs6077786	T	C	T	SOX2_HMG_3	28	0	+	0	0	.
chr20	10853749	10853750	chr20:10853750:T:C	rs6040200	T	C	T	SOX2_HMG_3	20	0	+	0	0	.
chr20	11234115	11234116	chr20:11234116:C:A	rs62191768	C	A	C	SOX2_HMG_3	20	0	+	0	0	.
chr20	11247372	11247373	chr20:11247373:C:T	rs4435520	C	T	T	SOX2_HMG_3	29	0	+	0	0	.
chr20	11432501	11432502	chr20:11432502:G:A	rs6078176	G	A	G	SOX2_HMG_3	-11	0	-	0	0	.
chr20	11569132	11569133	chr20:11569133:C:A	rs73077852	C	A	C	SOX2_HMG_3	30	0	-	0	0	.
chr20	11748647	11748648	chr20:11748648:G:A	rs116408014	G	A	G	SOX2_HMG_3	-18	0	-	0	0	.
chr20	11794730	11794731	chr20:11794731:G:A	rs6033228	G	A	G	SOX2_HMG_3	29	0	-	0	0	.
chr20	11814490	11814491	chr20:11814491:C:T	chr20:11814491:C:T	C	T	C	SOX2_HMG_3	3	1	+	2.2554288437866745	-4.653325935528544	AAGCAATGCAAGAGAGG
chr20	11873729	11873730	chr20:11873730:A:G	rs2144352	A	G	G	SOX2_HMG_3	-16	0	+	0	0	.
chr20	11929661	11929662	chr20:11929662:T:C	rs1883791	T	C	C	SOX2_HMG_3	-16	0	+	0	0	.
chr20	12012444	12012445	chr20:12012445:G:A	rs1158499840	G	A	G	SOX2_HMG_3	13	1	+	6.2150583231466205	-0.6936964561686004	GCTCAATTCCATTGGGA
chr20	12571640	12571641	chr20:12571641:T:A	rs6134596	T	A	T	SOX2_HMG_3	-6	0	+	0	0	.
chr20	12710223	12710224	chr20:12710224:A:G	rs8122873	A	G	G	SOX2_HMG_3	-8	0	+	0	0	.
chr20	12717525	12717526	chr20:12717526:A:T	rs6033501	A	T	A	SOX2_HMG_3	10	1	+	3.211677981812041	-3.6970767975031804	GATCAATGTTATATAAT
chr20	12763550	12763551	chr20:12763551:A:C	rs845587	A	C	C	SOX2_HMG_3	28	0	-	0	0	.
chr20	12929593	12929594	chr20:12929594:C:A	rs165555	C	A	C	SOX2_HMG_3	13	1	-	3.991333519229654	-2.9174212600855665	CAGCAATGGTAGGGATC
chr20	12941125	12941126	chr20:12941126:C:G	rs77061725	C	G	C	SOX2_HMG_3	28	0	-	0	0	.
chr20	12984456	12984457	chr20:12984457:A:T	rs3848750	A	T	A	SOX2_HMG_3	32	0	-	0	0	.
chr20	13122029	13122030	chr20:13122030:T:C	rs6074560	T	C	C	SOX2_HMG_3	18	0	+	0	0	.
chr20	13212938	13212939	chr20:13212939:C:T	rs17226481	C	T	C	SOX2_HMG_3	16	1	-	2.099935642575062	1.8262480261847904	CATCAATGCTTGTGGCG
chr20	13212939	13212940	chr20:13212940:G:A	rs6105048	G	A	G	SOX2_HMG_3	15	1	-	2.099935642575062	4.942644798751919	CATCAATGCTTGTGGCG
chr20	13337055	13337056	chr20:13337056:T:A	rs1321293	T	A	T	SOX2_HMG_3	19	0	+	0	0	.
chr20	13349266	13349267	chr20:13349267:A:G	rs6079006	A	G	A	SOX2_HMG_3	-10	0	+	0	0	.
chr20	13356348	13356349	chr20:13356349:C:A	rs1321294	C	A	A	SOX2_HMG_3	3	1	+	2.118094795229137	-4.7906599840860835	TGGCAATGTCAGGGAAG
chr20	13356366	13356367	chr20:13356367:A:C	rs1321295	A	C	C	SOX2_HMG_3	21	0	+	0	0	.
chr20	13397840	13397841	chr20:13397841:A:G	rs6079043	A	G	A	SOX2_HMG_3	35	0	+	0	0	.
chr20	13485254	13485255	chr20:13485255:C:T	rs6109908	C	T	T	SOX2_HMG_3	-17	0	-	0	0	.
chr20	13506489	13506490	chr20:13506490:T:C	rs6134897	T	C	T	SOX2_HMG_3	-19	0	-	0	0	.
chr20	13581676	13581677	chr20:13581677:C:A	rs112723315	C	A	C	SOX2_HMG_3	-17	0	+	0	0	.
chr20	13607775	13607776	chr20:13607776:G:A	rs182623356	G	A	G	SOX2_HMG_3	30	0	+	0	0	.
chr20	14204175	14204176	chr20:14204176:G:A	rs6079351	G	A	g	SOX2_HMG_3	24	0	+	0	0	.
chr20	14337233	14337234	chr20:14337234:G:C	rs204607	G	C	C	SOX2_HMG_3	7	1	+	3.6335420136755747	-3.0993001977603996	CAGCCATGATAGTGAAA
chr20	14513153	14513154	chr20:14513154:G:T	rs6079465	G	T	G	SOX2_HMG_3	34	0	+	0	0	.
chr20	14764968	14764969	chr20:14764969:G:A	rs78019035	G	A	A	SOX2_HMG_3	-10	0	+	0	0	.
chr20	14866487	14866488	chr20:14866488:G:A	rs376176	G	A	G	SOX2_HMG_3	36	0	+	0	0	.
chr20	15363534	15363535	chr20:15363535:G:A	rs6034164	G	A	G	SOX2_HMG_3	32	0	-	0	0	.
chr20	15556309	15556310	chr20:15556310:A:G	rs780678169	A	G	A	SOX2_HMG_3	11	1	-	4.200238748645903	-2.492452749586444	CATCATTTATATTGGTG
chr20	15611731	15611732	chr20:15611732:T:C	rs200742	T	C	C	SOX2_HMG_3	-19	0	+	0	0	.
chr20	15834873	15834874	chr20:15834874:C:T	rs2191521	C	T	T	SOX2_HMG_3	-15	0	-	0	0	.
chr20	15882938	15882939	chr20:15882939:A:G	rs6043594	A	G	A	SOX2_HMG_3	34	0	-	0	0	.
chr20	15943986	15943987	chr20:15943987:T:C	rs8117004	T	C	T	SOX2_HMG_3	24	0	-	0	0	.
chr20	16040140	16040141	chr20:16040141:C:T	rs775132	C	T	C	SOX2_HMG_3	15	1	-	1.221056819015672	1.6535304005665727	GATGAATGGCAGAGAGG
chr20	16052654	16052655	chr20:16052655:G:A	rs73092737	G	A	G	SOX2_HMG_3	19	0	+	0	0	.
chr20	16065033	16065034	chr20:16065034:A:G	rs775122	A	G	G	SOX2_HMG_3	14	1	+	11.575661371597109	7.39378375429599	ATTCAATTTTAGTGATT
chr20	16432993	16432994	chr20:16432994:T:C	rs61664184	T	C	C	SOX2_HMG_3	-16	0	-	0	0	.
chr20	16761199	16761200	chr20:16761200:A:G	rs78172674	A	G	A	SOX2_HMG_3	14	1	-	2.7812121172816098	-1.3383127434707889	CTTGAATGCCATTGTAG
chr20	16761683	16761684	chr20:16761684:C:T	rs4814554	C	T	T	SOX2_HMG_3	-16	0	-	0	0	.
chr20	17026452	17026453	chr20:17026453:A:G	rs73237266	A	G	A	SOX2_HMG_3	5	1	+	4.305512806503245	-2.603241972811976	GATCTATGGCATTTATG
chr20	17091713	17091714	chr20:17091714:C:T	rs7509169	C	T	C	SOX2_HMG_3	7	1	-	4.367116038728968	1.6383289181676324	CATAAATGGTATTTATG
chr20	17339411	17339412	chr20:17339412:T:C	rs6075193	T	C	C	SOX2_HMG_3	-11	0	-	0	0	.
chr20	17371375	17371376	chr20:17371376:A:G	rs62201010	A	G	a	SOX2_HMG_3	27	0	+	0	0	.
chr20	17545058	17545059	chr20:17545059:G:A	rs75225013	G	A	G	SOX2_HMG_3	-4	0	+	0	0	.
chr20	17747393	17747394	chr20:17747394:G:A	rs150319648	G	A	G	SOX2_HMG_3	2	1	+	2.9896972765578758	2.9896972765578758	AAGCAAAGGAAGTGAGG
chr20	17807562	17807563	chr20:17807563:G:C	chr20:17807563:G:C	G	C	A	SOX2_HMG_3	27	0	-	0	0	.
chr20	17850370	17850371	chr20:17850371:C:T	rs79517174	C	T	C	SOX2_HMG_3	-13	0	+	0	0	.
chr20	17850399	17850400	chr20:17850400:C:T	chr20:17850400:C:T	C	T	C	SOX2_HMG_3	16	1	+	5.406429995227551	6.603202048367905	GAGCAATGGAAGTGTGC
chr20	17850414	17850415	chr20:17850415:C:T	rs2618595	C	T	C	SOX2_HMG_3	31	0	+	0	0	.
chr20	18138596	18138597	chr20:18138597:G:C	rs8122151	G	C	G	SOX2_HMG_3	3	1	-	0.5328015817660591	-6.375953197549161	GGTCAAAGGCATGGAGA
chr20	18226595	18226596	chr20:18226596:C:T	rs6045265	C	T	C	SOX2_HMG_3	25	0	+	0	0	.
chr20	18301956	18301957	chr20:18301957:T:C	rs144384599	T	C	T	SOX2_HMG_3	32	0	-	0	0	.
chr20	18439459	18439460	chr20:18439460:T:C	rs916825578	T	C	T	SOX2_HMG_3	5	1	-	4.230805533925825	-2.6779492453893967	GGTCTATATAATTGAAA
chr20	18625672	18625673	chr20:18625673:A:G	rs73112658	A	G	A	SOX2_HMG_3	11	1	-	9.326297288465549	2.6336057902332004	AATCAGTGGCATTGAGG
chr20	18857140	18857141	chr20:18857141:C:T	rs2206875	C	T	C	SOX2_HMG_3	28	0	-	0	0	.
chr20	19450372	19450373	chr20:19450373:C:T	rs6035340	C	T	C	SOX2_HMG_3	-11	0	-	0	0	.
chr20	19454827	19454828	chr20:19454828:A:T	rs1883692	A	T	T	SOX2_HMG_3	19	0	+	0	0	.
chr20	19524972	19524973	chr20:19524973:G:A	rs761219	G	A	G	SOX2_HMG_3	0	1	+	2.656340424464854	2.4357461453795604	GCTCAATGGTTTTGTCT
chr20	19673809	19673810	chr20:19673810:A:G	rs1406971	A	G	A	SOX2_HMG_3	-12	0	+	0	0	.
chr20	19690407	19690408	chr20:19690408:A:G	rs1535244	A	G	G	SOX2_HMG_3	-19	0	-	0	0	.
chr20	19714466	19714467	chr20:19714467:A:T	rs144460181	A	T	A	SOX2_HMG_3	30	0	+	0	0	.
chr20	19779060	19779061	chr20:19779061:A:G	rs1980588	A	G	G	SOX2_HMG_3	-7	0	+	0	0	.
chr20	19808777	19808778	chr20:19808778:T:G	rs6035443	T	G	G	SOX2_HMG_3	5	1	+	3.2879310132470425	3.2879310132470425	TGGCATTGCTAGTGATG
chr20	19885160	19885161	chr20:19885161:T:G	rs4813378	T	G	T	SOX2_HMG_3	8	1	-	5.727878437416201	5.842653952008628	AAGCAATTATATTGGAT
chr20	19885177	19885178	chr20:19885178:T:G	rs6106148	T	G	T	SOX2_HMG_3	-9	0	-	0	0	.
chr20	19942355	19942356	chr20:19942356:T:G	rs6112671	T	G	T	SOX2_HMG_3	-3	0	-	0	0	.
chr20	19981147	19981148	chr20:19981148:G:A	rs199593	G	A	G	SOX2_HMG_3	-12	0	-	0	0	.
chr20	19981327	19981328	chr20:19981328:A:G	rs199594	A	G	A	SOX2_HMG_3	12	1	-	10.931084976366822	4.022330197051602	GAACAATTTCAGTGATG
chr20	19981346	19981347	chr20:19981347:C:T	rs199595	C	T	T	SOX2_HMG_3	-7	0	-	0	0	.
chr20	19984996	19984997	chr20:19984997:T:C	rs6046513	T	C	C	SOX2_HMG_3	-5	0	+	0	0	.
chr20	20837101	20837102	chr20:20837102:A:G	rs6047074	A	G	G	SOX2_HMG_3	-14	0	+	0	0	.
chr20	20992307	20992308	chr20:20992308:A:G	rs1885414	A	G	G	SOX2_HMG_3	34	0	+	0	0	.
chr20	21144025	21144026	chr20:21144026:G:C	rs1884762	G	C	C	SOX2_HMG_3	25	0	-	0	0	.
chr20	21290542	21290543	chr20:21290543:C:A	rs140894989	C	A	C	SOX2_HMG_3	17	0	+	0	0	.
chr20	21571865	21571866	chr20:21571866:G:A	rs6082455	G	A	G	SOX2_HMG_3	1	1	-	6.19603417121246	6.19603417121246	GCTCAATTATAGTGGAG
chr20	22373386	22373387	chr20:22373387:C:A	rs147263596	C	A	C	SOX2_HMG_3	-12	0	+	0	0	.
chr20	22486390	22486391	chr20:22486391:T:A	rs8117208	T	A	A	SOX2_HMG_3	10	1	-	9.957179012719788	3.0484242334045684	TAGCAATTTCATTGAAA
chr20	22563007	22563008	chr20:22563008:T:C	rs1203883	T	C	C	SOX2_HMG_3	-17	0	+	0	0	.
chr20	22579896	22579897	chr20:22579897:G:C	rs1203904	G	C	C	SOX2_HMG_3	28	0	-	0	0	.
chr20	22743609	22743610	chr20:22743610:C:A	rs13044931	C	A	C	SOX2_HMG_3	-19	0	+	0	0	.
chr20	22743628	22743629	chr20:22743629:A:G	rs73900551	A	G	A	SOX2_HMG_3	0	1	+	3.1570451076506645	3.377639386735958	AAGGAATGCCATTGAAC
chr20	22751757	22751758	chr20:22751758:C:T	rs16984397	C	T	C	SOX2_HMG_3	-3	0	+	0	0	.
chr20	22875361	22875362	chr20:22875362:C:A	rs56325562	C	A	-	SOX2_HMG_3	24	0	+	0	0	.
chr20	22925111	22925112	chr20:22925112:A:G	rs1411789	A	G	G	SOX2_HMG_3	-1	0	-	0	0	.
chr20	23028806	23028807	chr20:23028807:G:A	rs220990	G	A	A	SOX2_HMG_3	30	0	+	0	0	.
chr20	23049377	23049378	chr20:23049378:C:T	rs1800576	C	T	c	SOX2_HMG_3	-8	0	-	0	0	.
chr20	23120181	23120182	chr20:23120182:G:A	rs73905211	G	A	g	SOX2_HMG_3	-9	0	+	0	0	.
chr20	23125206	23125207	chr20:23125207:T:A	rs844886	T	A	A	SOX2_HMG_3	-4	0	+	0	0	.
chr20	23241836	23241837	chr20:23241837:C:T	rs1416399	C	T	C	SOX2_HMG_3	7	1	-	1.7069392589742032	-1.0218478615871316	TGGCAAGGGCAGTGAAA
chr20	23282132	23282133	chr20:23282133:T:C	rs6083072	T	C	C	SOX2_HMG_3	0	1	-	3.721674471113331	3.942268750198625	AATCAATTTCAGTTTAG
chr20	23337825	23337826	chr20:23337826:G:A	rs6076052	G	A	G	SOX2_HMG_3	-15	0	+	0	0	.
chr20	23422097	23422098	chr20:23422098:A:G	rs761725	A	G	G	SOX2_HMG_3	15	1	+	2.283899345346958	1.8514257637960572	ATTCAATGGATGTGAAC
chr20	23601385	23601386	chr20:23601386:G:A	rs2983636	G	A	G	SOX2_HMG_3	28	0	-	0	0	.
chr20	23719781	23719782	chr20:23719782:C:T	rs6083232	C	T	C	SOX2_HMG_3	34	0	-	0	0	.
chr20	23758866	23758867	chr20:23758867:C:T	rs6083252	C	T	T	SOX2_HMG_3	3	1	+	2.285883376832122	-4.6228714024830975	ACCCAATGTAAATGATG
chr20	23920245	23920246	chr20:23920246:T:C	rs73905806	T	C	T	SOX2_HMG_3	10	1	-	4.38882805239853	-2.5199267269166903	ACTCAATCACAGTGAAA
chr20	23937816	23937817	chr20:23937817:T:A	rs2258909	T	A	T	SOX2_HMG_3	0	1	+	3.8431850729411883	4.504986673615883	TGACAATGAAAGTGTGG
chr20	24011529	24011530	chr20:24011530:A:G	rs147318566	A	G	a	SOX2_HMG_3	5	1	+	3.205577331386794	-3.7031774479284256	ATACTATGTAATTGATG
chr20	24049094	24049095	chr20:24049095:T:G	rs59581206	T	G	T	SOX2_HMG_3	-15	0	+	0	0	.
chr20	24081313	24081314	chr20:24081314:T:G	rs858141	T	G	G	SOX2_HMG_3	6	1	-	2.2358685006975243	2.2358685006975243	CCTCAAAGTCAGTGTAG
chr20	24198892	24198893	chr20:24198893:G:A	rs76264801	G	A	G	SOX2_HMG_3	-7	0	+	0	0	.
chr20	24376392	24376393	chr20:24376393:G:A	rs11087464	G	A	G	SOX2_HMG_3	26	0	+	0	0	.
chr20	24518084	24518085	chr20:24518085:C:A	rs6049752	C	A	C	SOX2_HMG_3	23	0	-	0	0	.
chr20	24608823	24608824	chr20:24608824:A:C	chr20:24608824:A:C	A	C	A	SOX2_HMG_3	27	0	+	0	0	.
chr20	24696343	24696344	chr20:24696344:G:A	rs112270330	G	A	G	SOX2_HMG_3	28	0	-	0	0	.
chr20	24727486	24727487	chr20:24727487:T:C	rs565041722	T	C	T	SOX2_HMG_3	-6	0	+	0	0	.
chr20	24767202	24767203	chr20:24767203:G:A	rs182661826	G	A	G	SOX2_HMG_3	-4	0	-	0	0	.
chr20	24767966	24767967	chr20:24767967:C:A	rs73333468	C	A	C	SOX2_HMG_3	-15	0	-	0	0	.
chr20	24943622	24943623	chr20:24943623:G:A	rs6050184	G	A	G	SOX2_HMG_3	6	1	+	1.2445681057622497	1.2445681057622497	GAACAAGGGTTTTGATG
chr20	25030786	25030787	chr20:25030787:T:C	rs6050259	T	C	C	SOX2_HMG_3	-18	0	-	0	0	.
chr20	25076646	25076647	chr20:25076647:G:C	rs6050302	G	C	G	SOX2_HMG_3	8	1	-	2.9114299156297	3.6456983484009013	GGACAATTCTAGTGGGA
chr20	25127746	25127747	chr20:25127747:A:G	rs4815375	A	G	A	SOX2_HMG_3	-18	0	+	0	0	.
chr20	25238033	25238034	chr20:25238034:G:A	rs115761750	G	A	G	SOX2_HMG_3	23	0	+	0	0	.
chr20	25258671	25258672	chr20:25258672:G:C	rs779703081	G	C	G	SOX2_HMG_3	-11	0	-	0	0	.
chr20	25286086	25286087	chr20:25286087:C:T	rs67184896	C	T	.	SOX2_HMG_3	30	0	-	0	0	.
chr20	25309020	25309021	chr20:25309021:T:A	rs77358848	T	A	T	SOX2_HMG_3	27	0	+	0	0	.
chr20	25321516	25321517	chr20:25321517:G:T	rs940259448	G	T	G	SOX2_HMG_3	36	0	+	0	0	.
chr20	25355050	25355051	chr20:25355051:A:G	rs6037095	A	G	G	SOX2_HMG_3	31	0	+	0	0	.
chr20	25369586	25369587	chr20:25369587:A:G	rs4815411	A	G	a	SOX2_HMG_3	24	0	-	0	0	.
chr20	25484611	25484612	chr20:25484612:G:A	rs372678	G	A	G	SOX2_HMG_3	-10	0	+	0	0	.
chr20	25567130	25567131	chr20:25567131:A:G	rs6132845	A	G	A	SOX2_HMG_3	11	1	-	7.760026531453704	1.0673350332213565	CATCAAAGGTATTGTTT
chr20	25999973	25999974	chr20:25999974:C:T	rs139839080	C	T	.	SOX2_HMG_3	33	0	+	0	0	.
chr20	28557699	28557700	chr20:28557700:A:T	rs1399571794	A	T	.	SOX2_HMG_3	33	0	-	0	0	.
chr20	28557707	28557708	chr20:28557708:C:T	rs1171706564	C	T	.	SOX2_HMG_3	25	0	-	0	0	.
chr20	28558047	28558048	chr20:28558048:C:T	rs1360344829	C	T	.	SOX2_HMG_3	-11	0	-	0	0	.
chr20	28562981	28562982	chr20:28562982:C:T	rs1265811049	C	T	.	SOX2_HMG_3	1	1	-	10.399496924785717	12.231144514865008	GGTCAATTGTATTGTGA
chr20	28889849	28889850	chr20:28889850:A:C	chr20:28889850:A:C	A	C	.	SOX2_HMG_3	6	1	-	4.46527778615636	-2.4434769931588596	ATTCAATGGAATGGAGT
chr20	29120592	29120593	chr20:29120593:G:A	rs1327476296	G	A	.	SOX2_HMG_3	-1	0	+	0	0	.
chr20	29298552	29298553	chr20:29298553:G:A	rs1178288185	G	A	.	SOX2_HMG_3	-9	0	+	0	0	.
chr20	29298571	29298572	chr20:29298572:A:G	rs1285674799	A	G	.	SOX2_HMG_3	10	1	+	3.037753816095333	-3.8710009632198865	CACCAATGGTATTCAAC
chr20	29307264	29307265	chr20:29307265:C:G	rs1430939789	C	G	.	SOX2_HMG_3	23	0	-	0	0	.
chr20	29876511	29876512	chr20:29876512:G:A	rs1460358818	G	A	.	SOX2_HMG_3	15	1	-	3.761498918593134	6.604208074769993	AGACAATGGCAGTGGCG
chr20	30283508	30283509	chr20:30283509:T:C	rs6567485	T	C	.	SOX2_HMG_3	-12	0	-	0	0	.
chr20	30500619	30500620	chr20:30500620:A:G	rs879022409	A	G	.	SOX2_HMG_3	24	0	-	0	0	.
chr20	31053380	31053381	chr20:31053381:T:A	rs941958388	T	A	.	SOX2_HMG_3	1	1	+	8.34350307823882	11.349546930762134	ATTCAATGTAAGTGTAA
chr20	31053382	31053383	chr20:31053383:C:G	rs1359600266	C	G	.	SOX2_HMG_3	3	1	+	8.34350307823882	1.4347482989235991	ATTCAATGTAAGTGTAA
chr20	31053898	31053899	chr20:31053899:G:T	rs894772238	G	T	.	SOX2_HMG_3	8	1	+	7.93889131234444	8.076359232209102	ATGCAATGGAATTGAAT
chr20	31055242	31055243	chr20:31055243:G:T	rs991441904	G	T	.	SOX2_HMG_3	-7	0	+	0	0	.
chr20	31058787	31058788	chr20:31058788:C:G	rs1310366425	C	G	.	SOX2_HMG_3	-10	0	+	0	0	.
chr20	31058821	31058822	chr20:31058822:A:C	rs1273849235	A	C	.	SOX2_HMG_3	24	0	+	0	0	.
chr20	31059249	31059250	chr20:31059250:G:A	rs1182045015	G	A	.	SOX2_HMG_3	-3	0	+	0	0	.
chr20	31059260	31059261	chr20:31059261:G:T	rs1200297544	G	T	.	SOX2_HMG_3	8	1	+	4.839250827328726	4.976718747193388	AAGGAATGGAATTGAAG
chr20	31059534	31059535	chr20:31059535:G:C	chr20:31059535:G:C	G	C	.	SOX2_HMG_3	23	0	+	0	0	.
chr20	31062027	31062028	chr20:31062028:T:C	chr20:31062028:T:C	T	C	.	SOX2_HMG_3	-4	0	+	0	0	.
chr20	31062033	31062034	chr20:31062034:A:G	rs1264175895	A	G	.	SOX2_HMG_3	2	1	+	4.036180385552535	4.036180385552535	AAACAATGGAATGGAAT
chr20	31062691	31062692	chr20:31062692:G:A	rs1416128291	G	A	.	SOX2_HMG_3	15	1	+	10.512461583316854	10.944935164867754	AAGCAATGGAATTGAGT
chr20	31062728	31062729	chr20:31062729:G:T	rs1324040141	G	T	.	SOX2_HMG_3	22	0	+	0	0	.
chr20	31066067	31066068	chr20:31066068:G:C	rs1267108444	G	C	.	SOX2_HMG_3	-7	0	+	0	0	.
chr20	31067284	31067285	chr20:31067285:A:T	rs1164421506	A	T	.	SOX2_HMG_3	-18	0	+	0	0	.
chr20	31067294	31067295	chr20:31067295:T:C	rs1157442257	T	C	.	SOX2_HMG_3	-8	0	+	0	0	.
chr20	31067380	31067381	chr20:31067381:C:A	chr20:31067381:C:A	C	A	.	SOX2_HMG_3	8	1	+	1.777510688220504	1.662735173628075	AATCAATGCGAGTGCAA
chr20	31068315	31068316	chr20:31068316:G:C	chr20:31068316:G:C	G	C	.	SOX2_HMG_3	-2	0	+	0	0	.
chr20	31068327	31068328	chr20:31068328:A:G	chr20:31068328:A:G	A	G	.	SOX2_HMG_3	10	1	+	7.93889131234444	1.0301365330292194	ATGCAATGGAATTGAAT
chr20	31068330	31068331	chr20:31068331:G:C	chr20:31068331:G:C	G	C	.	SOX2_HMG_3	13	1	+	7.93889131234444	1.0301365330292198	ATGCAATGGAATTGAAT
chr20	31069432	31069433	chr20:31069433:T:A	rs908705391	T	A	.	SOX2_HMG_3	2	1	+	4.897751367707261	1.0301365330292194	ATTTAATGGAATTGAAT
chr20	31070966	31070967	chr20:31070967:C:G	rs1200548351	C	G	.	SOX2_HMG_3	3	1	+	2.888711874975949	-4.020042904339272	ATGCAATGGTATGGAAT
chr20	31070970	31070971	chr20:31070971:G:C	rs919571768	G	C	.	SOX2_HMG_3	7	1	+	2.888711874975949	-3.8441303364600254	ATGCAATGGTATGGAAT
chr20	31070976	31070977	chr20:31070977:G:C	rs1205459719	G	C	.	SOX2_HMG_3	13	1	+	2.888711874975949	-4.020042904339272	ATGCAATGGTATGGAAT
chr20	31072106	31072107	chr20:31072107:G:T	rs1330426383	G	T	.	SOX2_HMG_3	11	1	+	10.477810578126272	11.894890547346222	AATCAATGCAAGTGTAA
chr20	31072513	31072514	chr20:31072514:G:T	rs1439122197	G	T	.	SOX2_HMG_3	-8	0	+	0	0	.
chr20	31072527	31072528	chr20:31072528:T:C	rs923527773	T	C	.	SOX2_HMG_3	6	1	+	8.433178045616495	1.5244232663012736	AATGAATGGAATTGAAA
chr20	31072557	31072558	chr20:31072558:T:C	rs906444085	T	C	.	SOX2_HMG_3	36	0	+	0	0	.
chr20	31072587	31072588	chr20:31072588:T:C	chr20:31072588:T:C	T	C	.	SOX2_HMG_3	-18	0	+	0	0	.
chr20	31073163	31073164	chr20:31073164:C:G	rs1355723416	C	G	.	SOX2_HMG_3	8	1	+	2.907254198136357	3.6415226309075575	TATCAACGCAAGTGTAA
chr20	31073738	31073739	chr20:31073739:T:G	rs1273140507	T	G	.	SOX2_HMG_3	12	1	+	4.897751367707261	-2.01100341160796	ATTTAATGGAATTGAAT
chr20	31073744	31073745	chr20:31073745:T:G	rs1341318244	T	G	.	SOX2_HMG_3	18	0	+	0	0	.
chr20	31073751	31073752	chr20:31073752:C:A	rs1195598144	C	A	.	SOX2_HMG_3	25	0	+	0	0	.
chr20	31073756	31073757	chr20:31073757:G:C	rs1259927079	G	C	.	SOX2_HMG_3	30	0	+	0	0	.
chr20	31073812	31073813	chr20:31073813:A:C	rs1045747975	A	C	.	SOX2_HMG_3	26	0	+	0	0	.
chr20	31073824	31073825	chr20:31073825:G:A	rs1313917420	G	A	.	SOX2_HMG_3	8	1	+	3.9215735936522007	3.0725296462885714	GTTGAATGGAATTGAAC
chr20	31073829	31073830	chr20:31073830:G:C	rs1448166452	G	C	.	SOX2_HMG_3	13	1	+	3.9215735936522007	-2.9871811856630197	GTTGAATGGAATTGAAC
chr20	31074274	31074275	chr20:31074275:G:C	rs905894745	G	C	.	SOX2_HMG_3	-2	0	+	0	0	.
chr20	31074285	31074286	chr20:31074286:A:G	rs1054959164	A	G	.	SOX2_HMG_3	9	1	+	4.839250827328726	0.2584757981753567	AAGGAATGGAATTGAAG
chr20	31074299	31074300	chr20:31074300:G:C	rs1352980341	G	C	.	SOX2_HMG_3	23	0	+	0	0	.
chr20	31074303	31074304	chr20:31074304:A:G	rs1328516061	A	G	.	SOX2_HMG_3	27	0	+	0	0	.
chr20	31075222	31075223	chr20:31075223:C:G	rs943611828	C	G	.	SOX2_HMG_3	8	1	+	7.20462287957324	7.93889131234444	ATGCAATGCAATTGAAT
chr20	31162289	31162290	chr20:31162290:T:A	rs1459740600	T	A	.	SOX2_HMG_3	-19	0	-	0	0	.
chr20	31163638	31163639	chr20:31163639:G:A	rs879151527	G	A	.	SOX2_HMG_3	3	1	+	4.256774664637829	4.256774664637829	GAGGAATGGAATTGAAT
chr20	31164545	31164546	chr20:31164546:G:A	rs879021679	G	A	.	SOX2_HMG_3	-8	0	+	0	0	.
chr20	31186761	31186762	chr20:31186762:G:C	rs1174009560	G	C	.	SOX2_HMG_3	23	0	+	0	0	.
chr20	31187185	31187186	chr20:31187186:T:C	rs1410202764	T	C	.	SOX2_HMG_3	8	1	+	6.7687719016087655	5.897035548972903	AATCAATGTGAGTGTAA
chr20	31187230	31187231	chr20:31187231:G:C	chr20:31187231:G:C	G	C	.	SOX2_HMG_3	-17	0	+	0	0	.
chr20	31567323	31567324	chr20:31567324:C:T	rs545804263	C	T	C	SOX2_HMG_3	-12	0	+	0	0	.
chr20	31797753	31797754	chr20:31797754:G:T	rs6119725	G	T	G	SOX2_HMG_3	19	0	-	0	0	.
chr20	31885384	31885385	chr20:31885385:T:C	rs6061015	T	C	C	SOX2_HMG_3	-5	0	+	0	0	.
chr20	31967042	31967043	chr20:31967043:T:C	rs377432351	T	C	T	SOX2_HMG_3	-12	0	+	0	0	.
chr20	32437427	32437428	chr20:32437428:T:C	rs2295763	T	C	C	SOX2_HMG_3	-1	0	-	0	0	.
chr20	32771314	32771315	chr20:32771315:G:A	chr20:32771315:G:A	G	A	G	SOX2_HMG_3	-12	0	+	0	0	.
chr20	33203403	33203404	chr20:33203404:A:G	rs112481928	A	G	A	SOX2_HMG_3	-15	0	+	0	0	.
chr20	33238220	33238221	chr20:33238221:T:C	rs6059183	T	C	T	SOX2_HMG_3	-5	0	-	0	0	.
chr20	33271966	33271967	chr20:33271967:A:T	rs78206376	A	T	A	SOX2_HMG_3	15	1	-	4.024547468800255	2.7896450320835324	GCACAATGATTTTGATA
chr20	33569579	33569580	chr20:33569580:T:C	rs905420026	T	C	T	SOX2_HMG_3	14	1	+	5.322389735549787	1.2028648747973874	GATGAATTGTATTGTGA
chr20	33926517	33926518	chr20:33926518:G:C	rs6059555	G	C	C	SOX2_HMG_3	-19	0	+	0	0	.
chr20	33935365	33935366	chr20:33935366:C:G	rs6059574	C	G	C	SOX2_HMG_3	18	0	-	0	0	.
chr20	34314559	34314560	chr20:34314560:G:C	rs77301717	G	C	C	SOX2_HMG_3	3	1	-	7.51037997187211	0.6016251925568903	GATCAATGGAAGGGAAG
chr20	34314573	34314574	chr20:34314574:T:C	rs73263386	T	C	T	SOX2_HMG_3	-11	0	-	0	0	.
chr20	34675228	34675229	chr20:34675229:T:C	rs6087616	T	C	C	SOX2_HMG_3	6	1	+	3.01636573352273	-3.8923890457924912	GGGCAATGAGAGTGAAA
chr20	34843595	34843596	chr20:34843596:A:G	rs192101467	A	G	a	SOX2_HMG_3	29	0	-	0	0	.
chr20	34922858	34922859	chr20:34922859:A:G	rs6087649	A	G	A	SOX2_HMG_3	6	1	-	3.253607598493561	-3.655147180821659	GATCGATGGAATGGATG
chr20	34968011	34968012	chr20:34968012:C:T	rs75635914	C	T	C	SOX2_HMG_3	35	0	-	0	0	.
chr20	35041001	35041002	chr20:35041002:A:G	rs6060172	A	G	a	SOX2_HMG_3	5	1	+	3.529656896732626	-3.3790978825825944	CCTCAATGACAGAGAGG
chr20	35280120	35280121	chr20:35280121:G:A	rs2250205	G	A	A	SOX2_HMG_3	-3	0	+	0	0	.
chr20	35334722	35334723	chr20:35334723:A:G	rs142457045	A	G	A	SOX2_HMG_3	11	1	-	4.988478370093398	-1.7042131281389503	CATCCATTTTATTGTGG
chr20	35514475	35514476	chr20:35514476:T:G	rs528242926	T	G	T	SOX2_HMG_3	11	1	+	2.9432989282723576	1.526218959052409	GGGCAATGTTCTTGTTT
chr20	35547622	35547623	chr20:35547623:G:A	rs79636727	G	A	G	SOX2_HMG_3	21	0	-	0	0	.
chr20	35560114	35560115	chr20:35560115:T:C	rs6058260	T	C	T	SOX2_HMG_3	-14	0	+	0	0	.
chr20	35616529	35616530	chr20:35616530:G:T	rs115770665	G	T	G	SOX2_HMG_3	-10	0	+	0	0	.
chr20	35659779	35659780	chr20:35659780:G:A	rs6058290	G	A	A	SOX2_HMG_3	-13	0	-	0	0	.
chr20	36260193	36260194	chr20:36260194:C:T	rs2425193	C	T	C	SOX2_HMG_3	18	0	-	0	0	.
chr20	37220403	37220404	chr20:37220404:G:A	rs111957006	G	A	G	SOX2_HMG_3	3	1	-	1.8910068456594749	-5.017747933655745	GTCCAATGTCAATGAGG
chr20	37232026	37232027	chr20:37232027:G:A	rs909870	G	A	A	SOX2_HMG_3	3	1	+	3.4383014242714003	3.4383014242714003	TCTGAATGGCAGTGAGT
chr20	37394389	37394390	chr20:37394390:C:T	rs115528410	C	T	C	SOX2_HMG_3	-19	0	+	0	0	.
chr20	37609255	37609256	chr20:37609256:T:C	rs11697809	T	C	C	SOX2_HMG_3	-7	0	-	0	0	.
chr20	37734658	37734659	chr20:37734659:G:A	rs115143078	G	A	G	SOX2_HMG_3	0	1	-	4.105013227705983	3.967684249657319	CTTCAGTGGCAGTGAGA
chr20	37777429	37777430	chr20:37777430:C:G	rs145594973	C	G	C	SOX2_HMG_3	23	0	+	0	0	.
chr20	38158584	38158585	chr20:38158585:A:G	rs2284882	A	G	A	SOX2_HMG_3	-18	0	-	0	0	.
chr20	38168597	38168598	chr20:38168598:C:T	rs761002	C	T	C	SOX2_HMG_3	-2	0	-	0	0	.
chr20	38171232	38171233	chr20:38171233:T:C	rs1053625063	T	C	T	SOX2_HMG_3	14	1	+	4.476943068271895	0.35741820751949693	AGTCAATTCTATTATTG
chr20	38188172	38188173	chr20:38188173:T:A	rs6069086	T	A	T	SOX2_HMG_3	-3	0	-	0	0	.
chr20	38527643	38527644	chr20:38527644:G:A	rs805558	G	A	G	SOX2_HMG_3	-9	0	-	0	0	.
chr20	38707011	38707012	chr20:38707012:A:G	rs77796797	A	G	A	SOX2_HMG_3	-4	0	+	0	0	.
chr20	38877669	38877670	chr20:38877670:T:A	rs208802	T	A	T	SOX2_HMG_3	19	0	-	0	0	.
chr20	39157443	39157444	chr20:39157444:C:T	rs6124115	C	T	C	SOX2_HMG_3	4	1	+	4.059547113511728	4.059547113511728	GACCCATGCCAGTGATG
chr20	39426371	39426372	chr20:39426372:A:C	rs2143215	A	C	C	SOX2_HMG_3	14	1	-	4.958794179578708	3.4896904070918824	ATTCCATGATATTGTTA
chr20	39432725	39432726	chr20:39432726:T:G	rs8122510	T	G	G	SOX2_HMG_3	14	1	-	4.532576606496995	-2.299722099069698	ACTCCATGGCAGTGAAT
chr20	39738956	39738957	chr20:39738957:A:G	rs11906928	A	G	A	SOX2_HMG_3	0	1	-	2.535607390465676	2.6729363685143386	TGTCAATGTTATATATG
chr20	39849990	39849991	chr20:39849991:C:T	rs143652643	C	T	C	SOX2_HMG_3	20	0	-	0	0	.
chr20	39850013	39850014	chr20:39850014:C:T	rs148097573	C	T	C	SOX2_HMG_3	-3	0	-	0	0	.
chr20	40080359	40080360	chr20:40080360:G:A	rs16988767	G	A	G	SOX2_HMG_3	29	0	+	0	0	.
chr20	40265909	40265910	chr20:40265910:A:G	rs6028999	A	G	G	SOX2_HMG_3	-20	0	-	0	0	.
chr20	40266145	40266146	chr20:40266146:A:G	rs6071994	A	G	G	SOX2_HMG_3	3	1	-	10.42682687068056	17.335581649995778	CATTAATGATATTGATG
chr20	40341554	40341555	chr20:40341555:A:C	rs73609361	A	C	C	SOX2_HMG_3	19	0	-	0	0	.
chr20	40651237	40651238	chr20:40651238:G:A	rs746031423	G	A	G	SOX2_HMG_3	-16	0	+	0	0	.
chr20	40753088	40753089	chr20:40753089:C:T	rs17834206	C	T	C	SOX2_HMG_3	-6	0	-	0	0	.
chr20	40991003	40991004	chr20:40991004:C:T	rs4812477	C	T	T	SOX2_HMG_3	-13	0	+	0	0	.
chr20	41185283	41185284	chr20:41185284:G:A	rs140175465	G	A	G	SOX2_HMG_3	20	0	-	0	0	.
chr20	41335250	41335251	chr20:41335251:C:T	rs370714147	C	T	C	SOX2_HMG_3	30	0	-	0	0	.
chr20	41335269	41335270	chr20:41335270:C:G	rs563862578	C	G	C	SOX2_HMG_3	11	1	-	1.6547552868896476	-3.62085624212275	CAGCCATGTCAGTGAGC
chr20	41459954	41459955	chr20:41459955:T:A	rs73611278	T	A	T	SOX2_HMG_3	14	1	-	1.545991796656666	-1.1667820481576279	GGGCAAAGCCATTGAAC
chr20	41660143	41660144	chr20:41660144:A:C	rs6016595	A	C	C	SOX2_HMG_3	-2	0	-	0	0	.
chr20	41891333	41891334	chr20:41891334:T:G	rs6093531	T	G	T	SOX2_HMG_3	14	1	-	3.324467104369252	-3.5078316011974406	CAACAATGATATTCAAC
chr20	42285265	42285266	chr20:42285266:T:C	rs79606907	T	C	T	SOX2_HMG_3	-3	0	-	0	0	.
chr20	42442184	42442185	chr20:42442185:C:A	rs187683710	C	A	C	SOX2_HMG_3	-10	0	+	0	0	.
chr20	42442732	42442733	chr20:42442733:C:T	rs547771091	C	T	C	SOX2_HMG_3	-7	0	+	0	0	.
chr20	42576972	42576973	chr20:42576973:T:C	rs75450710	T	C	T	SOX2_HMG_3	-15	0	+	0	0	.
chr20	42714661	42714662	chr20:42714662:A:G	rs77797033	A	G	A	SOX2_HMG_3	8	1	+	1.6111565871399902	2.4602005345036186	GATCATTGATAGCGAAG
chr20	43397267	43397268	chr20:43397268:C:G	rs4991542	C	G	G	SOX2_HMG_3	-20	0	+	0	0	.
chr20	43449108	43449109	chr20:43449109:G:A	chr20:43449109:G:A	G	A	G	SOX2_HMG_3	36	0	+	0	0	.
chr20	43563442	43563443	chr20:43563443:G:A	rs3135415	G	A	G	SOX2_HMG_3	8	1	-	1.3455036436724495	2.2172399963083125	TGCCAAAGCCAGTGATG
chr20	43591389	43591390	chr20:43591390:T:C	rs562281872	T	C	T	SOX2_HMG_3	12	1	+	4.341844898386132	-2.5669098809290882	TGGTAATGTTATTGAAG
chr20	43821830	43821831	chr20:43821831:A:G	rs6093885	A	G	A	SOX2_HMG_3	5	1	+	12.646532052566558	5.737777273251337	GTTCAATGGCATTGAGT
chr20	44052170	44052171	chr20:44052171:G:C	rs6031328	G	C	C	SOX2_HMG_3	-20	0	-	0	0	.
chr20	44129600	44129601	chr20:44129601:G:A	rs761210	G	A	G	SOX2_HMG_3	-9	0	-	0	0	.
chr20	44184546	44184547	chr20:44184547:C:T	rs6065708	C	T	C	SOX2_HMG_3	29	0	+	0	0	.
chr20	44216672	44216673	chr20:44216673:G:C	rs6031461	G	C	G	SOX2_HMG_3	-14	0	+	0	0	.
chr20	44356714	44356715	chr20:44356715:A:G	rs6031546	A	G	A	SOX2_HMG_3	19	0	-	0	0	.
chr20	44410303	44410304	chr20:44410304:C:A	rs3212192	C	A	C	SOX2_HMG_3	-16	0	+	0	0	.
chr20	44427508	44427509	chr20:44427509:G:T	rs6031598	G	T	T	SOX2_HMG_3	-14	0	-	0	0	.
chr20	44664486	44664487	chr20:44664487:G:C	rs75076579	G	C	G	SOX2_HMG_3	17	0	-	0	0	.
chr20	44777134	44777135	chr20:44777135:G:C	rs140327843	G	C	G	SOX2_HMG_3	1	1	+	4.366569380708109	3.1921731182640856	AGTCGATGTCAGTGTTT
chr20	44993664	44993665	chr20:44993665:T:C	rs73298594	T	C	T	SOX2_HMG_3	35	0	+	0	0	.
chr20	45028638	45028639	chr20:45028639:G:A	rs6073607	G	A	A	SOX2_HMG_3	-17	0	+	0	0	.
chr20	45049641	45049642	chr20:45049642:T:C	rs2299977	T	C	T	SOX2_HMG_3	-16	0	+	0	0	.
chr20	45049686	45049687	chr20:45049687:A:C	rs183317848	A	C	A	SOX2_HMG_3	29	0	+	0	0	.
chr20	45128160	45128161	chr20:45128161:T:C	rs6104024	T	C	T	SOX2_HMG_3	15	1	+	8.483489838354531	5.640780682177672	TGCCAATAGTATTGATG
chr20	45306296	45306297	chr20:45306297:T:C	rs2233085	T	C	T	SOX2_HMG_3	18	0	+	0	0	.
chr20	45489270	45489271	chr20:45489271:T:A	rs113418595	T	A	t	SOX2_HMG_3	-17	0	-	0	0	.
chr20	45635550	45635551	chr20:45635551:G:A	rs6017637	G	A	G	SOX2_HMG_3	23	0	-	0	0	.
chr20	45817171	45817172	chr20:45817172:T:C	rs188681934	T	C	T	SOX2_HMG_3	18	0	+	0	0	.
chr20	46299375	46299376	chr20:46299376:A:G	rs73301988	A	G	a	SOX2_HMG_3	23	0	-	0	0	.
chr20	46636265	46636266	chr20:46636266:A:G	rs6122514	A	G	A	SOX2_HMG_3	2	1	-	6.579376754379883	1.5760046840642947	GATCTATAGTATTGTTG
chr20	46696120	46696121	chr20:46696121:C:T	rs3091619	C	T	C	SOX2_HMG_3	-5	0	+	0	0	.
chr20	46752143	46752144	chr20:46752144:G:A	chr20:46752144:G:A	G	A	G	SOX2_HMG_3	-14	0	+	0	0	.
chr20	46760998	46760999	chr20:46760999:C:A	rs4810554	C	A	A	SOX2_HMG_3	0	1	-	4.654299276730557	3.7719033969705684	GGATAATGGTATTGAGG
chr20	46953703	46953704	chr20:46953704:A:G	rs11696503	A	G	a	SOX2_HMG_3	35	0	-	0	0	.
chr20	47118484	47118485	chr20:47118485:C:G	rs6122555	C	G	G	SOX2_HMG_3	-5	0	+	0	0	.
chr20	47384300	47384301	chr20:47384301:T:A	rs534454508	T	A	t	SOX2_HMG_3	14	1	-	6.852885938116922	4.140112093302628	TTTCCATGTTAGTGATG
chr20	47384321	47384322	chr20:47384322:T:C	rs547104118	T	C	t	SOX2_HMG_3	-7	0	-	0	0	.
chr20	47681181	47681182	chr20:47681182:G:A	rs73913415	G	A	G	SOX2_HMG_3	7	1	+	5.009846664613509	2.281059544052172	TTCCAATGGCATTGTAA
chr20	47782311	47782312	chr20:47782312:T:C	rs115576587	T	C	T	SOX2_HMG_3	20	0	-	0	0	.
chr20	47863202	47863203	chr20:47863203:C:T	rs5002650	C	T	T	SOX2_HMG_3	21	0	-	0	0	.
chr20	47887971	47887972	chr20:47887972:C:A	rs2426003	C	A	A	SOX2_HMG_3	-15	0	-	0	0	.
chr20	47895394	47895395	chr20:47895395:G:T	rs4810725	G	T	-	SOX2_HMG_3	24	0	+	0	0	.
chr20	47963423	47963424	chr20:47963424:T:C	rs6018817	T	C	C	SOX2_HMG_3	-1	0	-	0	0	.
chr20	47963424	47963425	chr20:47963425:G:A	rs6012307	G	A	A	SOX2_HMG_3	-2	0	-	0	0	.
chr20	47963564	47963565	chr20:47963565:T:C	rs4372968	T	C	C	SOX2_HMG_3	-4	0	-	0	0	.
chr20	48018365	48018366	chr20:48018366:C:A	rs12481385	C	A	C	SOX2_HMG_3	-19	0	+	0	0	.
chr20	48185731	48185732	chr20:48185732:C:T	rs11907901	C	T	C	SOX2_HMG_3	29	0	-	0	0	.
chr20	48262498	48262499	chr20:48262499:T:C	rs226810	T	C	T	SOX2_HMG_3	-6	0	+	0	0	.
chr20	48437518	48437519	chr20:48437519:C:T	rs1321006	C	T	T	SOX2_HMG_3	19	0	+	0	0	.
chr20	48503233	48503234	chr20:48503234:G:A	rs993236165	G	A	g	SOX2_HMG_3	-8	0	-	0	0	.
chr20	48505270	48505271	chr20:48505271:C:A	rs1181808486	C	A	-	SOX2_HMG_3	13	1	-	3.197690554384981	-3.7110642249302392	GAGCAATGCTGTTGTAA
chr20	48513427	48513428	chr20:48513428:G:C	rs1190898161	G	C	-	SOX2_HMG_3	-8	0	-	0	0	.
chr20	48573811	48573812	chr20:48573812:A:T	rs73325581	A	T	T	SOX2_HMG_3	26	0	+	0	0	.
chr20	48629588	48629589	chr20:48629589:G:A	rs3936193	G	A	G	SOX2_HMG_3	-5	0	+	0	0	.
chr20	48764452	48764453	chr20:48764453:T:C	rs6019409	T	C	t	SOX2_HMG_3	5	1	-	14.170625695674623	7.261870916359401	CCTCAATGCTATTGATA
chr20	48809588	48809589	chr20:48809589:T:G	rs16994152	T	G	T	SOX2_HMG_3	-3	0	+	0	0	.
chr20	49052639	49052640	chr20:49052640:G:A	rs67623477	G	A	G	SOX2_HMG_3	31	0	-	0	0	.
chr20	49310931	49310932	chr20:49310932:G:C	rs78463987	G	C	G	SOX2_HMG_3	23	0	+	0	0	.
chr20	49517755	49517756	chr20:49517756:T:C	rs112853036	T	C	t	SOX2_HMG_3	6	1	+	2.1509618713087675	-4.7577929080064525	CATCAGTGGAAGTGGGG
chr20	49550486	49550487	chr20:49550487:T:C	rs77208342	T	C	T	SOX2_HMG_3	5	1	-	1.4225931244120893	-5.486161654903131	GGACAATGCCAGGGAGA
chr20	49628457	49628458	chr20:49628458:G:A	rs235026	G	A	G	SOX2_HMG_3	15	1	+	3.5550395610794894	3.9875131426303905	AAACAATTTTTTTGAGT
chr20	49693269	49693270	chr20:49693270:C:T	rs4809751	C	T	C	SOX2_HMG_3	19	0	-	0	0	.
chr20	49823485	49823486	chr20:49823486:T:C	rs1328454	T	C	C	SOX2_HMG_3	-20	0	+	0	0	.
chr20	49829753	49829754	chr20:49829754:A:G	rs17724104	A	G	A	SOX2_HMG_3	-10	0	+	0	0	.
chr20	49848383	49848384	chr20:49848384:A:G	rs184343568	A	G	A	SOX2_HMG_3	31	0	+	0	0	.
chr20	49868778	49868779	chr20:49868779:G:A	rs56405223	G	A	G	SOX2_HMG_3	-3	0	+	0	0	.
chr20	49920716	49920717	chr20:49920717:T:C	rs6067270	T	C	C	SOX2_HMG_3	-10	0	-	0	0	.
chr20	50067900	50067901	chr20:50067901:T:C	rs6020235	T	C	C	SOX2_HMG_3	10	1	-	2.7105384894014666	-4.198216289913754	GATAAATGCTATAGAGG
chr20	50306137	50306138	chr20:50306138:T:C	rs192608938	T	C	T	SOX2_HMG_3	-8	0	+	0	0	.
chr20	50400211	50400212	chr20:50400212:C:T	rs4809793	C	T	c	SOX2_HMG_3	36	0	+	0	0	.
chr20	50492455	50492456	chr20:50492456:A:G	rs111953176	A	G	A	SOX2_HMG_3	11	1	-	3.746084926626186	-2.9466065716061607	CAAGAATGTAATTGAGA
chr20	50687592	50687593	chr20:50687593:C:T	rs34400825	C	T	C	SOX2_HMG_3	-8	0	+	0	0	.
chr20	50929424	50929425	chr20:50929425:C:T	chr20:50929425:C:T	C	T	C	SOX2_HMG_3	-15	0	-	0	0	.
chr20	51009085	51009086	chr20:51009086:A:G	rs4809820	A	G	G	SOX2_HMG_3	21	0	-	0	0	.
chr20	51026155	51026156	chr20:51026156:G:C	rs6091250	G	C	C	SOX2_HMG_3	25	0	+	0	0	.
chr20	51172595	51172596	chr20:51172596:A:G	rs2426257	A	G	A	SOX2_HMG_3	-11	0	-	0	0	.
chr20	51346896	51346897	chr20:51346897:T:C	rs111777744	T	C	T	SOX2_HMG_3	22	0	-	0	0	.
chr20	51430252	51430253	chr20:51430253:A:G	rs761375	A	G	A	SOX2_HMG_3	27	0	-	0	0	.
chr20	51443610	51443611	chr20:51443611:T:C	rs228832	T	C	T	SOX2_HMG_3	5	1	-	3.4757420248630346	-3.4330127544521867	GGTCAATGGCACTGGGA
chr20	51554829	51554830	chr20:51554830:C:T	rs147317695	C	T	C	SOX2_HMG_3	28	0	-	0	0	.
chr20	51554830	51554831	chr20:51554831:A:G	rs4811193	A	G	C	SOX2_HMG_3	27	0	-	0	0	.
chr20	51554861	51554862	chr20:51554862:G:A	rs76423759	G	A	G	SOX2_HMG_3	-4	0	-	0	0	.
chr20	51625174	51625175	chr20:51625175:C:A	rs2235859	C	A	C	SOX2_HMG_3	-18	0	-	0	0	.
chr20	51856056	51856057	chr20:51856057:A:C	rs6096616	A	C	A	SOX2_HMG_3	5	1	+	3.57059949456386	-3.3381552847513603	GATCAACTGCAGTGGTG
chr20	51886586	51886587	chr20:51886587:T:C	rs6096638	T	C	C	SOX2_HMG_3	19	0	-	0	0	.
chr20	51886591	51886592	chr20:51886592:T:A	rs62226909	T	A	T	SOX2_HMG_3	14	1	-	3.936439080747523	1.2236652359332287	TTTCATTTCTAGTGATG
chr20	51895546	51895547	chr20:51895547:T:G	rs73275680	T	G	T	SOX2_HMG_3	9	1	-	3.1920466409487958	4.243951848958478	CAGCAATGAAATTTAAA
chr20	51995141	51995142	chr20:51995142:G:A	rs77243645	G	A	G	SOX2_HMG_3	16	1	+	3.297387004002512	3.0236993876122407	AGTCAAAAAAATTGAAG
chr20	52125246	52125247	chr20:52125247:T:C	rs6123133	T	C	C	SOX2_HMG_3	5	1	-	3.576102093695837	-3.3326526856193843	GATCAATGTCAGTTTCT
chr20	52318934	52318935	chr20:52318935:C:T	rs6123155	C	T	C	SOX2_HMG_3	-13	0	-	0	0	.
chr20	52595323	52595324	chr20:52595324:A:G	rs12479995	A	G	A	SOX2_HMG_3	-2	0	+	0	0	.
chr20	53053832	53053833	chr20:53053833:T:G	rs6091627	T	G	G	SOX2_HMG_3	27	0	+	0	0	.
chr20	53179830	53179831	chr20:53179831:C:T	rs8117842	C	T	C	SOX2_HMG_3	36	0	-	0	0	.
chr20	53217484	53217485	chr20:53217485:G:A	rs6013649	G	A	a	SOX2_HMG_3	18	0	+	0	0	.
chr20	53426164	53426165	chr20:53426165:G:C	rs77936907	G	C	G	SOX2_HMG_3	-10	0	+	0	0	.
chr20	53639554	53639555	chr20:53639555:T:C	rs75394107	T	C	t	SOX2_HMG_3	16	1	-	4.024547468800255	4.298235085190527	GTGCAATGATATTAATA
chr20	53657829	53657830	chr20:53657830:T:A	rs6022643	T	A	T	SOX2_HMG_3	-16	0	-	0	0	.
chr20	53747067	53747068	chr20:53747068:G:T	rs2041317	G	T	G	SOX2_HMG_3	-20	0	+	0	0	.
chr20	53837397	53837398	chr20:53837398:C:T	rs6022791	C	T	t	SOX2_HMG_3	-20	0	-	0	0	.
chr20	53844415	53844416	chr20:53844416:C:G	rs117403007	C	G	C	SOX2_HMG_3	-7	0	+	0	0	.
chr20	53866005	53866006	chr20:53866006:A:G	rs6013823	A	G	A	SOX2_HMG_3	-16	0	+	0	0	.
chr20	53894918	53894919	chr20:53894919:G:C	rs6068711	G	C	G	SOX2_HMG_3	-15	0	+	0	0	.
chr20	53902124	53902125	chr20:53902125:C:T	rs67656520	C	T	C	SOX2_HMG_3	33	0	+	0	0	.
chr20	54201363	54201364	chr20:54201364:C:T	rs62214559	C	T	C	SOX2_HMG_3	36	0	-	0	0	.
chr20	54212282	54212283	chr20:54212283:G:T	rs6023039	G	T	G	SOX2_HMG_3	28	0	-	0	0	.
chr20	54220069	54220070	chr20:54220070:T:A	rs1032212729	T	A	T	SOX2_HMG_3	4	1	-	4.064863514310051	-2.8438912650051695	TAACAATCTCATTGTTG
chr20	54269510	54269511	chr20:54269511:A:G	rs292136	A	G	A	SOX2_HMG_3	-4	0	-	0	0	.
chr20	54646876	54646877	chr20:54646877:T:C	rs11907426	T	C	T	SOX2_HMG_3	5	1	-	6.09971054824926	-0.8090442310659602	CATCAATGTAGGTGAAT
chr20	55199286	55199287	chr20:55199287:T:C	rs6127426	T	C	T	SOX2_HMG_3	5	1	-	6.0005119537769644	-0.9082428255382562	TATCAATGTATGTGATC
chr20	55216585	55216586	chr20:55216586:T:A	rs2904455	T	A	A	SOX2_HMG_3	2	1	+	6.711617097015425	2.844002262337385	ACTTAATGTTAGTGATT
chr20	55714451	55714452	chr20:55714452:A:C	rs2207900	A	C	A	SOX2_HMG_3	-16	0	-	0	0	.
chr20	56553516	56553517	chr20:56553517:G:A	rs73153084	G	A	G	SOX2_HMG_3	30	0	-	0	0	.
chr20	56724349	56724350	chr20:56724350:A:G	rs2426662	A	G	G	SOX2_HMG_3	-16	0	-	0	0	.
chr20	56987511	56987512	chr20:56987512:T:C	rs148541976	T	C	T	SOX2_HMG_3	30	0	-	0	0	.
chr20	57110804	57110805	chr20:57110805:T:C	rs62203922	T	C	T	SOX2_HMG_3	25	0	+	0	0	.
chr20	57260054	57260055	chr20:57260055:G:C	rs4811832	G	C	C	SOX2_HMG_3	21	0	+	0	0	.
chr20	57464070	57464071	chr20:57464071:G:T	rs6025577	G	T	T	SOX2_HMG_3	-16	0	-	0	0	.
chr20	57482001	57482002	chr20:57482002:C:G	rs1417939563	C	G	C	SOX2_HMG_3	14	1	-	1.2768048364863875	-1.3736162517791861	AAGCAATGGCTTTGGGG
chr20	57555996	57555997	chr20:57555997:G:A	rs17496809	G	A	G	SOX2_HMG_3	23	0	-	0	0	.
chr20	57684242	57684243	chr20:57684243:A:G	rs114539186	A	G	A	SOX2_HMG_3	5	1	+	7.288956638191964	0.38020185887674307	GGTCAATGGTAATGACA
chr20	57924826	57924827	chr20:57924827:T:G	chr20:57924827:T:G	T	G	T	SOX2_HMG_3	15	1	+	5.5496806414194175	3.8823046231517946	CAGGAATGGAATTGATG
chr20	58095772	58095773	chr20:58095773:G:C	rs17529936	G	C	g	SOX2_HMG_3	-19	0	-	0	0	.
chr20	58101904	58101905	chr20:58101905:G:T	rs146245164	G	T	g	SOX2_HMG_3	-12	0	+	0	0	.
chr20	58307181	58307182	chr20:58307182:T:C	rs509062	T	C	T	SOX2_HMG_3	15	1	+	2.3135873834261753	-0.5291217727506825	TATCAACGGAAATGATA
chr20	58548970	58548971	chr20:58548971:A:G	rs1123030	A	G	G	SOX2_HMG_3	-7	0	+	0	0	.
chr20	58635529	58635530	chr20:58635530:T:C	rs564715920	T	C	T	SOX2_HMG_3	-18	0	-	0	0	.
chr20	59134109	59134110	chr20:59134110:A:G	rs80225530	A	G	G	SOX2_HMG_3	20	0	+	0	0	.
chr20	59163457	59163458	chr20:59163458:A:G	rs150784118	A	G	A	SOX2_HMG_3	-2	0	+	0	0	.
chr20	59394502	59394503	chr20:59394503:G:A	rs6128557	G	A	A	SOX2_HMG_3	-14	0	+	0	0	.
chr20	59639609	59639610	chr20:59639610:T:C	rs911150	T	C	C	SOX2_HMG_3	9	1	+	2.641736480396477	1.8350663464594312	GATTATTGGTATTGAGT
chr20	59776044	59776045	chr20:59776045:A:C	rs1182490	A	C	A	SOX2_HMG_3	6	1	-	2.3399920382084995	-4.56876274110672	AGACTATGCCAGTGATT
chr20	59780505	59780506	chr20:59780506:A:G	rs6100581	A	G	G	SOX2_HMG_3	35	0	-	0	0	.
chr20	59780558	59780559	chr20:59780559:T:C	rs6092824	T	C	C	SOX2_HMG_3	-18	0	-	0	0	.
chr20	59813481	59813482	chr20:59813482:A:G	rs1338929	A	G	A	SOX2_HMG_3	-17	0	-	0	0	.
chr20	59822601	59822602	chr20:59822602:G:A	rs115768718	G	A	G	SOX2_HMG_3	-11	0	-	0	0	.
chr20	59992680	59992681	chr20:59992681:A:G	rs2426863	A	G	G	SOX2_HMG_3	36	0	+	0	0	.
chr20	59992849	59992850	chr20:59992850:C:T	rs78587726	C	T	C	SOX2_HMG_3	35	0	+	0	0	.
chr20	60084137	60084138	chr20:60084138:C:T	rs78513871	C	T	C	SOX2_HMG_3	19	0	+	0	0	.
chr20	60331810	60331811	chr20:60331811:G:T	rs114751515	G	T	G	SOX2_HMG_3	-20	0	-	0	0	.
chr20	60484281	60484282	chr20:60484282:G:A	rs75009095	G	A	G	SOX2_HMG_3	-16	0	+	0	0	.
chr20	60510190	60510191	chr20:60510191:T:A	chr20:60510191:T:A	T	A	T	SOX2_HMG_3	-4	0	+	0	0	.
chr20	60811572	60811573	chr20:60811573:A:G	rs6128917	A	G	A	SOX2_HMG_3	25	0	+	0	0	.
chr20	60999368	60999369	chr20:60999369:T:C	rs2078451	T	C	C	SOX2_HMG_3	-14	0	+	0	0	.
chr20	61337953	61337954	chr20:61337954:A:G	rs6028126	A	G	A	SOX2_HMG_3	12	1	-	3.9187883376728445	-2.989966441642377	TGTAAATGCTATTGTGA
chr20	61338075	61338076	chr20:61338076:T:C	rs6101320	T	C	C	SOX2_HMG_3	-8	0	+	0	0	.
chr20	61404578	61404579	chr20:61404579:A:T	rs141933255	A	T	A	SOX2_HMG_3	-6	0	-	0	0	.
chr20	61831256	61831257	chr20:61831257:A:G	rs11697078	A	G	a	SOX2_HMG_3	22	0	+	0	0	.
chr20	61945191	61945192	chr20:61945192:T:C	rs78918251	T	C	t	SOX2_HMG_3	36	0	-	0	0	.
chr20	61948721	61948722	chr20:61948722:C:G	rs6061391	C	G	C	SOX2_HMG_3	-11	0	-	0	0	.
chr20	62043820	62043821	chr20:62043821:G:A	rs6061980	G	A	G	SOX2_HMG_3	12	1	-	2.719104957026208	9.62785973634143	AGGCAATGTCATCGTTG
chr20	62500122	62500123	chr20:62500123:C:T	rs1264260767	C	T	C	SOX2_HMG_3	16	1	+	4.347909798261765	5.544681851402118	CAGCAATGTGATTGAGC
chr20	62773365	62773366	chr20:62773366:C:T	rs532796808	C	T	C	SOX2_HMG_3	-15	0	+	0	0	.
chr20	62792341	62792342	chr20:62792342:T:G	rs114305936	T	G	T	SOX2_HMG_3	23	0	-	0	0	.
chr20	62792342	62792343	chr20:62792343:T:C	rs114958815	T	C	T	SOX2_HMG_3	22	0	-	0	0	.
chr20	62924227	62924228	chr20:62924228:G:A	rs74338469	G	A	G	SOX2_HMG_3	11	1	+	2.8534775800322674	-2.4221339489801306	AAGAAATGTAAGTGAGA
chr20	63012065	63012066	chr20:63012066:A:T	rs563360924	A	T	A	SOX2_HMG_3	17	0	-	0	0	.
chr20	63019600	63019601	chr20:63019601:G:A	rs114147630	G	A	G	SOX2_HMG_3	13	1	-	2.8372079403260066	2.8372079403260066	CATCAAAGTTATTCAGG
chr20	63137174	63137175	chr20:63137175:G:A	rs2427524	G	A	A	SOX2_HMG_3	21	0	+	0	0	.
chr20	63495903	63495904	chr20:63495904:G:C	chr20:63495904:G:C	G	C	G	SOX2_HMG_3	-2	0	+	0	0	.
chr20	63973139	63973140	chr20:63973140:G:A	rs113085515	G	A	G	SOX2_HMG_3	-2	0	+	0	0	.
chr20	64036081	64036082	chr20:64036082:G:C	rs538808348	G	C	G	SOX2_HMG_3	35	0	+	0	0	.
chr20	64138089	64138090	chr20:64138090:A:G	rs34668587	A	G	A	SOX2_HMG_3	-7	0	+	0	0	.
chr21	7243204	7243205	chr21:7243205:T:G	rs1484289566	T	G	.	SOX2_HMG_3	0	1	-	4.578090245729551	4.053617623103522	ACTCAATGAATTTGAAA
chr21	7955542	7955543	chr21:7955543:C:T	rs1421310927	C	T	.	SOX2_HMG_3	-17	0	+	0	0	.
chr21	7955579	7955580	chr21:7955580:T:A	rs1417244447	T	A	.	SOX2_HMG_3	20	0	+	0	0	.
chr21	8993317	8993318	chr21:8993318:C:T	rs74908361	C	T	.	SOX2_HMG_3	-11	0	-	0	0	.
chr21	8994753	8994754	chr21:8994754:T:A	rs77410052	T	A	.	SOX2_HMG_3	5	1	-	5.19177662042397	-1.7169781588912505	TGTCAATTAGAGTGATA
chr21	8994753	8994754	chr21:8994754:T:C	chr21:8994754:T:C	T	C	.	SOX2_HMG_3	5	1	-	5.19177662042397	-1.7169781588912505	TGTCAATTAGAGTGATA
chr21	8995204	8995205	chr21:8995205:G:T	rs79277307	G	T	.	SOX2_HMG_3	-7	0	-	0	0	.
chr21	8995249	8995250	chr21:8995250:G:A	rs75577515	G	A	.	SOX2_HMG_3	21	0	-	0	0	.
chr21	9000716	9000717	chr21:9000717:A:G	rs371505215	A	G	.	SOX2_HMG_3	-18	0	-	0	0	.
chr21	9000717	9000718	chr21:9000718:C:T	rs376044444	C	T	.	SOX2_HMG_3	-19	0	-	0	0	.
chr21	9330940	9330941	chr21:9330941:A:T	rs369243700	A	T	.	SOX2_HMG_3	34	0	-	0	0	.
chr21	9770276	9770277	chr21:9770277:C:T	rs1423400478	C	T	.	SOX2_HMG_3	-3	0	-	0	0	.
chr21	9778988	9778989	chr21:9778989:G:A	rs1229317846	G	A	.	SOX2_HMG_3	26	0	-	0	0	.
chr21	9850648	9850649	chr21:9850649:T:C	rs173381	T	C	N	SOX2_HMG_3	-16	0	+	0	0	.
chr21	10021207	10021208	chr21:10021208:T:C	rs867112965	T	C	.	SOX2_HMG_3	28	0	-	0	0	.
chr21	10400939	10400940	chr21:10400940:T:C	rs1810530	T	C	C	SOX2_HMG_3	20	0	-	0	0	.
chr21	10416532	10416533	chr21:10416533:T:C	rs4913584	T	C	T	SOX2_HMG_3	-10	0	+	0	0	.
chr21	10416560	10416561	chr21:10416561:G:A	rs2775403	G	A	G	SOX2_HMG_3	18	0	+	0	0	.
chr21	10416565	10416566	chr21:10416566:T:A	rs28498040	T	A	T	SOX2_HMG_3	23	0	+	0	0	.
chr21	10430363	10430364	chr21:10430364:T:A	rs2459202	T	A	T	SOX2_HMG_3	6	1	+	7.755933743233761	0.8471789639185399	AATAAATGTTATTGGTG
chr21	10663710	10663711	chr21:10663711:C:T	rs28460337	C	T	.	SOX2_HMG_3	27	0	-	0	0	.
chr21	10734450	10734451	chr21:10734451:T:G	rs771280033	T	G	.	SOX2_HMG_3	4	1	-	6.424138552885184	-0.48461622643003666	AAGGAATGGTATTGAAA
chr21	10734458	10734459	chr21:10734459:A:G	rs28735724	A	G	.	SOX2_HMG_3	-4	0	-	0	0	.
chr21	14028296	14028297	chr21:14028297:C:T	rs2822383	C	T	N	SOX2_HMG_3	16	1	-	6.309443369992161	6.03575575360189	AGTCAATTAGATTGAAG
chr21	14076538	14076539	chr21:14076539:T:C	rs62209925	T	C	c	SOX2_HMG_3	34	0	-	0	0	.
chr21	14415416	14415417	chr21:14415417:G:A	rs2822661	G	A	G	SOX2_HMG_3	-2	0	+	0	0	.
chr21	14583326	14583327	chr21:14583327:T:C	rs2822792	T	C	C	SOX2_HMG_3	32	0	-	0	0	.
chr21	14591956	14591957	chr21:14591957:C:T	rs459526	C	T	C	SOX2_HMG_3	8	1	-	2.813176009353346	1.9641320619897171	GAGAAATGGCAGTGACA
chr21	14630836	14630837	chr21:14630837:A:G	rs7276028	A	G	A	SOX2_HMG_3	-16	0	+	0	0	.
chr21	15010256	15010257	chr21:15010257:C:G	chr21:15010257:C:G	C	G	C	SOX2_HMG_3	-12	0	+	0	0	.
chr21	15052099	15052100	chr21:15052100:A:G	rs2823025	A	G	A	SOX2_HMG_3	24	0	-	0	0	.
chr21	15275055	15275056	chr21:15275056:C:T	chr21:15275056:C:T	C	T	C	SOX2_HMG_3	8	1	+	4.565799269474089	5.4375356221099524	AATCAACTCTATTGGTA
chr21	15430234	15430235	chr21:15430235:T:C	rs17209200	T	C	T	SOX2_HMG_3	5	1	-	4.666906592281889	-2.241848187033331	ACTCAATTTTGGTGATT
chr21	15628734	15628735	chr21:15628735:C:T	rs2823400	C	T	C	SOX2_HMG_3	-4	0	-	0	0	.
chr21	15692431	15692432	chr21:15692432:G:A	rs114134170	G	A	G	SOX2_HMG_3	-3	0	-	0	0	.
chr21	15743429	15743430	chr21:15743430:T:A	rs7277813	T	A	T	SOX2_HMG_3	30	0	+	0	0	.
chr21	15858086	15858087	chr21:15858087:C:G	rs78470636	C	G	C	SOX2_HMG_3	0	1	-	2.641736480396477	1.8966695786851542	GATCACTGGTATTCAGT
chr21	16305966	16305967	chr21:16305967:C:T	chr21:16305967:C:T	C	T	C	SOX2_HMG_3	-20	0	+	0	0	.
chr21	16370009	16370010	chr21:16370010:A:G	rs2823756	A	G	G	SOX2_HMG_3	-13	0	-	0	0	.
chr21	16588555	16588556	chr21:16588556:A:C	rs1000760385	A	C	A	SOX2_HMG_3	31	0	+	0	0	.
chr21	16829846	16829847	chr21:16829847:C:G	rs2037944	C	G	C	SOX2_HMG_3	-20	0	-	0	0	.
chr21	16830685	16830686	chr21:16830686:A:G	rs2223075	A	G	G	SOX2_HMG_3	31	0	+	0	0	.
chr21	16870254	16870255	chr21:16870255:A:C	chr21:16870255:A:C	A	C	A	SOX2_HMG_3	27	0	-	0	0	.
chr21	17463472	17463473	chr21:17463473:A:T	rs2824323	A	T	T	SOX2_HMG_3	16	1	+	4.830895758781905	4.301512933395986	TATCAATGTCAGTTTAA
chr21	17512311	17512312	chr21:17512312:T:G	rs73324049	T	G	T	SOX2_HMG_3	5	1	-	4.220836667186101	-2.687918112129121	ATCCAATATTAGTGAGT
chr21	17671916	17671917	chr21:17671917:G:A	rs2824434	G	A	A	SOX2_HMG_3	-19	0	-	0	0	.
chr21	17799229	17799230	chr21:17799230:T:C	rs2824496	T	C	C	SOX2_HMG_3	-2	0	+	0	0	.
chr21	17944687	17944688	chr21:17944688:T:C	rs1876037	T	C	C	SOX2_HMG_3	-9	0	+	0	0	.
chr21	17944728	17944729	chr21:17944729:C:T	rs9305833	C	T	C	SOX2_HMG_3	32	0	+	0	0	.
chr21	18155622	18155623	chr21:18155623:C:T	rs11700527	C	T	C	SOX2_HMG_3	28	0	-	0	0	.
chr21	18155662	18155663	chr21:18155663:A:G	rs79271997	A	G	A	SOX2_HMG_3	-12	0	-	0	0	.
chr21	18325240	18325241	chr21:18325241:G:A	rs990214	G	A	A	SOX2_HMG_3	-10	0	+	0	0	.
chr21	18443674	18443675	chr21:18443675:C:T	rs983074196	C	T	c	SOX2_HMG_3	-18	0	-	0	0	.
chr21	19018860	19018861	chr21:19018861:G:A	rs2825272	G	A	G	SOX2_HMG_3	-5	0	-	0	0	.
chr21	19034317	19034318	chr21:19034318:A:G	rs2825301	A	G	A	SOX2_HMG_3	-3	0	+	0	0	.
chr21	19046047	19046048	chr21:19046048:G:A	rs73893496	G	A	g	SOX2_HMG_3	-1	0	+	0	0	.
chr21	19046072	19046073	chr21:19046073:C:T	rs10854430	C	T	T	SOX2_HMG_3	24	0	+	0	0	.
chr21	19176876	19176877	chr21:19176877:C:T	rs35321618	C	T	C	SOX2_HMG_3	-17	0	-	0	0	.
chr21	19356889	19356890	chr21:19356890:A:C	rs856185	A	C	C	SOX2_HMG_3	34	0	+	0	0	.
chr21	20163254	20163255	chr21:20163255:G:A	rs1034349	G	A	A	SOX2_HMG_3	24	0	+	0	0	.
chr21	20272952	20272953	chr21:20272953:G:A	rs112484390	G	A	G	SOX2_HMG_3	-16	0	-	0	0	.
chr21	20853469	20853470	chr21:20853470:T:A	rs566963785	T	A	T	SOX2_HMG_3	36	0	+	0	0	.
chr21	21000817	21000818	chr21:21000818:A:G	rs138426866	A	G	A	SOX2_HMG_3	-3	0	+	0	0	.
chr21	21344253	21344254	chr21:21344254:C:T	rs7278783	C	T	C	SOX2_HMG_3	0	1	+	1.4551106983223583	1.3177817202736948	CGTCAAGGGCTTTGATA
chr21	21407166	21407167	chr21:21407167:C:G	rs2826829	C	G	C	SOX2_HMG_3	33	0	-	0	0	.
chr21	21605762	21605763	chr21:21605763:C:A	rs74336637	C	A	C	SOX2_HMG_3	29	0	+	0	0	.
chr21	21714343	21714344	chr21:21714344:A:G	rs1783417	A	G	A	SOX2_HMG_3	4	1	+	4.710403610090278	-2.198351169224944	ATTCAATGTTATTCTAA
chr21	21714344	21714345	chr21:21714345:A:G	rs4143401	A	G	A	SOX2_HMG_3	5	1	+	4.710403610090278	-2.198351169224944	ATTCAATGTTATTCTAA
chr21	21752549	21752550	chr21:21752550:A:G	rs2826992	A	G	a	SOX2_HMG_3	12	1	-	3.510672548848098	-3.3980822304671214	TATCAACACCAGTGAGA
chr21	21808249	21808250	chr21:21808250:C:A	rs2827050	C	A	C	SOX2_HMG_3	-14	0	+	0	0	.
chr21	21907638	21907639	chr21:21907639:A:T	rs114168678	A	T	A	SOX2_HMG_3	-2	0	+	0	0	.
chr21	22248552	22248553	chr21:22248553:A:G	rs138890202	A	G	A	SOX2_HMG_3	9	1	-	4.4437110542934946	3.637040920356449	TATCAATGTTATTCCTG
chr21	22582309	22582310	chr21:22582310:T:C	rs2827617	T	C	T	SOX2_HMG_3	33	0	+	0	0	.
chr21	23175595	23175596	chr21:23175596:C:T	rs2135335	C	T	T	SOX2_HMG_3	24	0	+	0	0	.
chr21	23739485	23739486	chr21:23739486:T:A	rs7275880	T	A	A	SOX2_HMG_3	1	1	+	9.53899900370323	12.545042856226546	CTTCAATTTCAGTGAAA
chr21	24014047	24014048	chr21:24014048:A:G	rs34542175	A	G	a	SOX2_HMG_3	11	1	-	7.198460173220976	0.5057686749886294	AAGAAATGCTATTGATG
chr21	24117535	24117536	chr21:24117536:A:T	rs1622396	A	T	a	SOX2_HMG_3	7	1	+	4.496407900242707	5.180484516070505	AATCATTATTATTGTTC
chr21	24931194	24931195	chr21:24931195:T:C	rs67132832	T	C	T	SOX2_HMG_3	-20	0	-	0	0	.
chr21	24941856	24941857	chr21:24941857:T:G	rs2829472	T	G	T	SOX2_HMG_3	17	0	+	0	0	.
chr21	25322336	25322337	chr21:25322337:C:A	rs8127776	C	A	C	SOX2_HMG_3	22	0	-	0	0	.
chr21	25638799	25638800	chr21:25638800:A:G	rs974680	A	G	A	SOX2_HMG_3	5	1	+	3.401939321847897	-3.5068154574673236	GTCCAATGTAAGTGTGG
chr21	26077618	26077619	chr21:26077619:C:T	rs117349040	C	T	C	SOX2_HMG_3	8	1	-	7.126058472055131	6.277014524691502	AAAAAATGGCATTGATG
chr21	26077646	26077647	chr21:26077647:C:T	rs59737592	C	T	c	SOX2_HMG_3	-20	0	-	0	0	.
chr21	26099393	26099394	chr21:26099394:C:T	rs2830053	C	T	C	SOX2_HMG_3	21	0	-	0	0	.
chr21	26366087	26366088	chr21:26366088:C:T	rs62219377	C	T	T	SOX2_HMG_3	-14	0	-	0	0	.
chr21	26642560	26642561	chr21:26642561:T:C	rs461377	T	C	T	SOX2_HMG_3	-6	0	+	0	0	.
chr21	26846923	26846924	chr21:26846924:T:C	rs985049763	T	C	T	SOX2_HMG_3	-9	0	-	0	0	.
chr21	26946186	26946187	chr21:26946187:G:A	rs1186480527	G	A	G	SOX2_HMG_3	9	1	+	4.301975299300127	8.882750328453495	GATCAATGTGAGGGATG
chr21	27026681	27026682	chr21:27026682:A:G	rs77222011	A	G	A	SOX2_HMG_3	6	1	-	2.508540696782239	-4.400214082532981	CATCAATGGATTGGATG
chr21	27258102	27258103	chr21:27258103:A:T	rs2078299	A	T	A	SOX2_HMG_3	-6	0	+	0	0	.
chr21	27329708	27329709	chr21:27329709:G:A	rs239726	G	A	A	SOX2_HMG_3	29	0	+	0	0	.
chr21	27369249	27369250	chr21:27369250:G:A	rs2830884	G	A	G	SOX2_HMG_3	18	0	-	0	0	.
chr21	27473746	27473747	chr21:27473747:T:C	rs34727758	T	C	T	SOX2_HMG_3	-18	0	+	0	0	.
chr21	27830164	27830165	chr21:27830165:C:A	rs243651	C	A	A	SOX2_HMG_3	-2	0	+	0	0	.
chr21	28224529	28224530	chr21:28224530:G:T	rs2831668	G	T	G	SOX2_HMG_3	21	0	-	0	0	.
chr21	28436237	28436238	chr21:28436238:T:C	rs113362703	T	C	T	SOX2_HMG_3	-6	0	+	0	0	.
chr21	28637628	28637629	chr21:28637629:G:C	rs1153265	G	C	G	SOX2_HMG_3	-16	0	-	0	0	.
chr21	28749753	28749754	chr21:28749754:G:A	rs56103672	G	A	G	SOX2_HMG_3	31	0	+	0	0	.
chr21	28754159	28754160	chr21:28754160:A:G	rs73186036	A	G	G	SOX2_HMG_3	34	0	+	0	0	.
chr21	28754203	28754204	chr21:28754204:G:A	rs78394380	G	A	G	SOX2_HMG_3	-9	0	+	0	0	.
chr21	28754248	28754249	chr21:28754249:C:T	rs68036372	C	T	C	SOX2_HMG_3	36	0	+	0	0	.
chr21	28762011	28762012	chr21:28762012:T:C	rs2832061	T	C	T	SOX2_HMG_3	14	1	-	2.706534342472722	-1.4753432748283977	ACACAATGGTAGAGATT
chr21	28836691	28836692	chr21:28836692:G:A	rs60849436	G	A	G	SOX2_HMG_3	-16	0	-	0	0	.
chr21	28848903	28848904	chr21:28848904:C:A	rs2738946	C	A	C	SOX2_HMG_3	36	0	+	0	0	.
chr21	29261831	29261832	chr21:29261832:A:T	rs142990591	A	T	A	SOX2_HMG_3	22	0	+	0	0	.
chr21	29342276	29342277	chr21:29342277:G:A	rs411697	G	A	G	SOX2_HMG_3	13	1	+	5.427134193093179	-1.481620586222041	ATTGAATGGAATTGAAA
chr21	29387149	29387150	chr21:29387150:G:A	rs7278255	G	A	A	SOX2_HMG_3	26	0	+	0	0	.
chr21	29578487	29578488	chr21:29578488:T:G	rs138624436	T	G	T	SOX2_HMG_3	12	1	+	5.783187714913729	-1.1255670644014915	GCTCAAGGCCAGTGATA
chr21	29679215	29679216	chr21:29679216:C:T	rs8128745	C	T	C	SOX2_HMG_3	-7	0	-	0	0	.
chr21	29708639	29708640	chr21:29708640:T:C	rs2832431	T	C	C	SOX2_HMG_3	5	1	+	4.177414928871829	4.177414928871829	CTTCATTGCTAGTGAGA
chr21	29892479	29892480	chr21:29892480:A:C	rs2300332	A	C	A	SOX2_HMG_3	-19	0	+	0	0	.
chr21	30232082	30232083	chr21:30232083:T:C	rs1573458	T	C	C	SOX2_HMG_3	27	0	+	0	0	.
chr21	30400352	30400353	chr21:30400353:T:C	rs2832853	T	C	-	SOX2_HMG_3	-7	0	+	0	0	.
chr21	30718589	30718590	chr21:30718590:C:T	rs2833031	C	T	T	SOX2_HMG_3	7	1	-	2.724571526099764	-0.004215594461571159	AAGAAATGCCATTGAGC
chr21	30979280	30979281	chr21:30979281:C:G	rs75486310	C	G	C	SOX2_HMG_3	28	0	-	0	0	.
chr21	31222173	31222174	chr21:31222174:C:T	rs77926910	C	T	C	SOX2_HMG_3	-1	0	+	0	0	.
chr21	31337119	31337120	chr21:31337120:C:T	rs2833380	C	T	C	SOX2_HMG_3	-12	0	-	0	0	.
chr21	31352421	31352422	chr21:31352422:A:G	rs9647143	A	G	A	SOX2_HMG_3	11	1	+	2.3318109390129003	7.6074224680253	AATTAATGCCAATGAAG
chr21	31364065	31364066	chr21:31364066:T:C	rs150424142	T	C	T	SOX2_HMG_3	-4	0	-	0	0	.
chr21	31382565	31382566	chr21:31382566:C:T	rs536419	C	T	T	SOX2_HMG_3	20	0	-	0	0	.
chr21	31420602	31420603	chr21:31420603:G:T	rs7280668	G	T	T	SOX2_HMG_3	-6	0	+	0	0	.
chr21	31420613	31420614	chr21:31420614:C:T	rs2833404	C	T	T	SOX2_HMG_3	5	1	+	7.283484923874608	7.283484923874608	CATCACTGTTAGTGTTG
chr21	31793644	31793645	chr21:31793645:C:T	rs9981074	C	T	C	SOX2_HMG_3	-13	0	+	0	0	.
chr21	31850670	31850671	chr21:31850671:T:C	rs7283845	T	C	T	SOX2_HMG_3	12	1	+	4.672300906652605	-2.236453872662615	GGTCAATATTGGTGAAA
chr21	32192400	32192401	chr21:32192401:C:T	rs78098177	C	T	C	SOX2_HMG_3	29	0	+	0	0	.
chr21	32357171	32357172	chr21:32357172:C:T	rs2833785	C	T	C	SOX2_HMG_3	-10	0	-	0	0	.
chr21	32389311	32389312	chr21:32389312:A:G	rs28500491	A	G	G	SOX2_HMG_3	-11	0	+	0	0	.
chr21	32408057	32408058	chr21:32408058:T:C	rs55642633	T	C	C	SOX2_HMG_3	-13	0	+	0	0	.
chr21	32473734	32473735	chr21:32473735:T:C	rs75300206	T	C	T	SOX2_HMG_3	-20	0	-	0	0	.
chr21	32520449	32520450	chr21:32520450:G:A	rs13046819	G	A	G	SOX2_HMG_3	14	1	+	2.5723606495207876	6.754238266821907	CTGCAATGTCAGTGGGT
chr21	32585233	32585234	chr21:32585234:C:T	rs2833917	C	T	C	SOX2_HMG_3	-1	0	-	0	0	.
chr21	32596889	32596890	chr21:32596890:A:G	rs1782986	A	G	G	SOX2_HMG_3	-11	0	-	0	0	.
chr21	33086465	33086466	chr21:33086466:A:G	rs58912052	A	G	A	SOX2_HMG_3	7	1	-	6.475901467023095	1.787769760320656	ATTCAATTGTATAGATA
chr21	33099296	33099297	chr21:33099297:G:A	rs9984627	G	A	G	SOX2_HMG_3	16	1	+	4.1326006721994695	3.8589130558091975	CAGAAATGGAAGTGATG
chr21	33119854	33119855	chr21:33119855:T:C	rs77574284	T	C	T	SOX2_HMG_3	26	0	+	0	0	.
chr21	33127268	33127269	chr21:33127269:C:T	rs2834092	C	T	C	SOX2_HMG_3	30	0	+	0	0	.
chr21	33321335	33321336	chr21:33321336:C:T	rs73194016	C	T	C	SOX2_HMG_3	-1	0	+	0	0	.
chr21	33326079	33326080	chr21:33326080:C:A	rs12626750	C	A	C	SOX2_HMG_3	3	1	+	3.531494550402414	-3.3772602289128066	TCTCAATGAGATTGTAA
chr21	33417500	33417501	chr21:33417501:T:C	rs2834211	T	C	T	SOX2_HMG_3	-15	0	-	0	0	.
chr21	33492704	33492705	chr21:33492705:C:A	rs79777044	C	A	C	SOX2_HMG_3	13	1	-	6.987388944890298	0.0786341655750773	AGTCAATGAAGTTGATA
chr21	33685392	33685393	chr21:33685393:C:A	rs116262415	C	A	C	SOX2_HMG_3	-5	0	+	0	0	.
chr21	34021319	34021320	chr21:34021320:C:T	rs9979439	C	T	C	SOX2_HMG_3	-19	0	+	0	0	.
chr21	34178457	34178458	chr21:34178458:T:A	rs13048855	T	A	T	SOX2_HMG_3	21	0	+	0	0	.
chr21	34256576	34256577	chr21:34256577:A:G	rs2834425	A	G	G	SOX2_HMG_3	27	0	-	0	0	.
chr21	34326089	34326090	chr21:34326090:T:C	rs1013063	T	C	T	SOX2_HMG_3	15	1	+	3.3591599895674955	0.5164508333906372	CATCAAGGCTTTTGATA
chr21	34335924	34335925	chr21:34335925:G:A	rs6517224	G	A	G	SOX2_HMG_3	-3	0	+	0	0	.
chr21	34540507	34540508	chr21:34540508:C:G	rs58353479	C	G	C	SOX2_HMG_3	36	0	-	0	0	.
chr21	34552584	34552585	chr21:34552585:T:C	rs2247912	T	C	C	SOX2_HMG_3	6	1	+	7.041434607239232	0.13267982792401112	AATCAATGGAAATGACA
chr21	34636996	34636997	chr21:34636997:T:C	rs1892600	T	C	C	SOX2_HMG_3	5	1	-	2.621161673667229	-4.287593105647991	GGTAAATGCTAGTGGAG
chr21	34752239	34752240	chr21:34752240:G:A	rs78167512	G	A	G	SOX2_HMG_3	3	1	-	4.6159211984011	-2.2928335809141203	GACCAATGCTGTTGAGG
chr21	34783120	34783121	chr21:34783121:T:G	rs186099645	T	G	T	SOX2_HMG_3	5	1	-	4.445871869719925	-2.462882909595296	AGTCAATGTGAGTGTTC
chr21	34855235	34855236	chr21:34855236:A:C	rs140000309	A	C	A	SOX2_HMG_3	24	0	-	0	0	.
chr21	34857390	34857391	chr21:34857391:G:A	rs9984858	G	A	G	SOX2_HMG_3	36	0	-	0	0	.
chr21	34864521	34864522	chr21:34864522:G:A	rs2268291	G	A	G	SOX2_HMG_3	-2	0	-	0	0	.
chr21	34919930	34919931	chr21:34919931:A:C	rs10460712	A	C	C	SOX2_HMG_3	7	1	-	2.230013293710413	4.274723798443949	GCTCAATTACCGTGAGG
chr21	34997148	34997149	chr21:34997149:C:T	rs73900767	C	T	T	SOX2_HMG_3	11	1	-	4.670044526361657	-0.6055670026507407	ATTCACTGTCAGTGAAT
chr21	35047872	35047873	chr21:35047873:C:A	rs138712577	C	A	C	SOX2_HMG_3	0	1	+	2.0946061919207146	2.619078814546744	CGGCAATGCCTTTGAGA
chr21	35047902	35047903	chr21:35047903:T:G	rs77398576	T	G	T	SOX2_HMG_3	30	0	+	0	0	.
chr21	35266817	35266818	chr21:35266818:C:T	chr21:35266818:C:T	C	T	C	SOX2_HMG_3	7	1	-	4.6337185628242015	1.9049314422628658	CGGCAATGTCATTCATA
chr21	35266823	35266824	chr21:35266824:C:T	rs558316982	C	T	C	SOX2_HMG_3	1	1	-	4.6337185628242015	6.465366152903493	CGGCAATGTCATTCATA
chr21	35283680	35283681	chr21:35283681:A:G	rs73901926	A	G	A	SOX2_HMG_3	9	1	-	7.3744959031693655	6.567825769232319	TAACAATGCTAGTGTGA
chr21	35617876	35617877	chr21:35617877:A:T	rs2142034	A	T	A	SOX2_HMG_3	28	0	-	0	0	.
chr21	35834090	35834091	chr21:35834091:G:A	rs74276113	G	A	G	SOX2_HMG_3	7	1	+	9.334644981481409	6.605857860920074	TAACAATGGAATTGTTA
chr21	35940026	35940027	chr21:35940027:G:A	rs1573304	G	A	G	SOX2_HMG_3	3	1	-	6.43058903385871	-0.4781657454565107	CGTCAATGTAACTGAAA
chr21	36021283	36021284	chr21:36021284:A:G	rs2835233	A	G	A	SOX2_HMG_3	36	0	+	0	0	.
chr21	36185634	36185635	chr21:36185635:A:G	rs2835304	A	G	A	SOX2_HMG_3	2	1	+	3.949742385308428	3.949742385308428	TAACAATGTCAGGGAAG
chr21	36481023	36481024	chr21:36481024:G:C	rs115270476	G	C	G	SOX2_HMG_3	19	0	+	0	0	.
chr21	36908518	36908519	chr21:36908519:T:C	rs115715506	T	C	T	SOX2_HMG_3	33	0	+	0	0	.
chr21	36988964	36988965	chr21:36988965:A:C	rs58128008	A	C	c	SOX2_HMG_3	-12	0	+	0	0	.
chr21	36988979	36988980	chr21:36988980:C:T	rs73198004	C	T	t	SOX2_HMG_3	3	1	+	4.163412975656237	-2.745341803658984	AATCAATGGTAGGGGAT
chr21	37196006	37196007	chr21:37196007:C:T	rs6579	C	T	C	SOX2_HMG_3	21	0	+	0	0	.
chr21	37463091	37463092	chr21:37463092:G:A	rs2186338	G	A	G	SOX2_HMG_3	-9	0	+	0	0	.
chr21	37547031	37547032	chr21:37547032:A:G	rs111243825	A	G	A	SOX2_HMG_3	32	0	-	0	0	.
chr21	37547082	37547083	chr21:37547083:C:T	rs189048440	C	T	C	SOX2_HMG_3	-19	0	-	0	0	.
chr21	37656110	37656111	chr21:37656111:A:G	rs857966	A	G	A	SOX2_HMG_3	33	0	+	0	0	.
chr21	37985091	37985092	chr21:37985092:T:A	rs73208172	T	A	T	SOX2_HMG_3	-8	0	+	0	0	.
chr21	38313021	38313022	chr21:38313022:T:G	rs184703662	T	G	T	SOX2_HMG_3	21	0	-	0	0	.
chr21	38313043	38313044	chr21:38313044:T:C	rs73423924	T	C	T	SOX2_HMG_3	-1	0	-	0	0	.
chr21	38498385	38498386	chr21:38498386:G:A	rs2836441	G	A	A	SOX2_HMG_3	0	1	+	8.113852639970093	7.893258360884799	GATCAAGTTTATTGATC
chr21	38800411	38800412	chr21:38800412:T:C	rs8134019	T	C	T	SOX2_HMG_3	21	0	+	0	0	.
chr21	38800571	38800572	chr21:38800572:A:G	rs8133056	A	G	A	SOX2_HMG_3	12	1	-	8.98086879949969	2.072114020184469	TGACAATGGAATTGAAA
chr21	38826218	38826219	chr21:38826219:A:G	rs2836687	A	G	A	SOX2_HMG_3	-19	0	-	0	0	.
chr21	38857417	38857418	chr21:38857418:T:C	rs458748	T	C	C	SOX2_HMG_3	29	0	+	0	0	.
chr21	38857424	38857425	chr21:38857425:T:G	rs458749	T	G	G	SOX2_HMG_3	36	0	+	0	0	.
chr21	38949624	38949625	chr21:38949625:A:T	rs7278217	A	T	A	SOX2_HMG_3	34	0	-	0	0	.
chr21	38990253	38990254	chr21:38990254:C:A	rs116594496	C	A	C	SOX2_HMG_3	20	0	-	0	0	.
chr21	39113006	39113007	chr21:39113007:G:T	rs1882772	G	T	G	SOX2_HMG_3	-5	0	+	0	0	.
chr21	39155847	39155848	chr21:39155848:C:T	rs8132295	C	T	T	SOX2_HMG_3	25	0	-	0	0	.
chr21	39350143	39350144	chr21:39350144:T:A	rs2239384	T	A	A	SOX2_HMG_3	20	0	-	0	0	.
chr21	39483966	39483967	chr21:39483967:A:G	rs117345628	A	G	A	SOX2_HMG_3	5	1	+	3.393461726602528	-3.515293052712692	AGGCAATGAAATTTATG
chr21	39604953	39604954	chr21:39604954:C:A	rs62222820	C	A	C	SOX2_HMG_3	35	0	-	0	0	.
chr21	39769924	39769925	chr21:39769925:G:A	rs2837193	G	A	A	SOX2_HMG_3	34	0	+	0	0	.
chr21	39930033	39930034	chr21:39930034:A:C	rs10854400	A	C	A	SOX2_HMG_3	28	0	-	0	0	.
chr21	39930052	39930053	chr21:39930053:G:A	rs118022481	G	A	G	SOX2_HMG_3	9	1	-	1.0004625399303784	1.8071326738674243	AATCAGTGGCGGTGAGG
chr21	40014991	40014992	chr21:40014992:T:C	rs7283470	T	C	C	SOX2_HMG_3	30	0	-	0	0	.
chr21	40015003	40015004	chr21:40015004:T:C	rs760168	T	C	C	SOX2_HMG_3	18	0	-	0	0	.
chr21	40383481	40383482	chr21:40383482:T:C	rs2837596	T	C	T	SOX2_HMG_3	2	1	+	3.133368638971333	-1.870003431344254	TCTCAATTCTTGTGATT
chr21	40534673	40534674	chr21:40534674:G:T	rs16999939	G	T	G	SOX2_HMG_3	-19	0	+	0	0	.
chr21	40543332	40543333	chr21:40543333:T:G	rs7278073	T	G	G	SOX2_HMG_3	31	0	+	0	0	.
chr21	40564294	40564295	chr21:40564295:T:C	rs17000004	T	C	t	SOX2_HMG_3	20	0	+	0	0	.
chr21	41058083	41058084	chr21:41058084:A:C	rs2104809	A	C	A	SOX2_HMG_3	32	0	+	0	0	.
chr21	41405649	41405650	chr21:41405650:A:G	rs59998734	A	G	G	SOX2_HMG_3	5	1	+	2.9023940963405295	-4.006360682974691	AGTCCATGGCAGTGACC
chr21	41541334	41541335	chr21:41541335:G:T	rs73903421	G	T	G	SOX2_HMG_3	25	0	-	0	0	.
chr21	41593014	41593015	chr21:41593015:A:G	rs137999292	A	G	A	SOX2_HMG_3	-7	0	-	0	0	.
chr21	41631230	41631231	chr21:41631231:T:G	rs62217773	T	G	T	SOX2_HMG_3	-11	0	-	0	0	.
chr21	41715384	41715385	chr21:41715385:G:C	rs4919931	G	C	C	SOX2_HMG_3	-16	0	+	0	0	.
chr21	41827058	41827059	chr21:41827059:A:G	rs28415259	A	G	G	SOX2_HMG_3	14	1	+	4.453837139598807	0.2719595222976882	CAGCAATGCTAGGGATT
chr21	42021904	42021905	chr21:42021905:G:A	rs529265696	G	A	G	SOX2_HMG_3	-11	0	-	0	0	.
chr21	42307434	42307435	chr21:42307435:T:C	rs118187505	T	C	T	SOX2_HMG_3	12	1	+	4.975993078786155	-1.9327617005290647	GACCCATGGCATTGAAG
chr21	42398680	42398681	chr21:42398681:A:G	rs9325634	A	G	A	SOX2_HMG_3	30	0	-	0	0	.
chr21	42491692	42491693	chr21:42491693:C:T	rs17178101	C	T	C	SOX2_HMG_3	32	0	-	0	0	.
chr21	42563318	42563319	chr21:42563319:G:A	rs17115129	G	A	G	SOX2_HMG_3	27	0	+	0	0	.
chr21	42623733	42623734	chr21:42623734:C:G	rs2839566	C	G	C	SOX2_HMG_3	0	1	-	2.106139087916975	1.3610721862056518	GCTAAATGGTGTTGATG
chr21	42940145	42940146	chr21:42940146:T:C	rs115176444	T	C	T	SOX2_HMG_3	31	0	+	0	0	.
chr21	42964737	42964738	chr21:42964738:C:T	rs192354146	C	T	C	SOX2_HMG_3	-11	0	+	0	0	.
chr21	42964738	42964739	chr21:42964739:G:A	rs544821495	G	A	G	SOX2_HMG_3	-10	0	+	0	0	.
chr21	43018678	43018679	chr21:43018679:A:G	rs1672136	A	G	A	SOX2_HMG_3	5	1	+	3.8297358499957426	-3.079018929319478	TGACAATGTCATTGGGC
chr21	43034904	43034905	chr21:43034905:C:G	rs747568	C	G	C	SOX2_HMG_3	28	0	-	0	0	.
chr21	43034922	43034923	chr21:43034923:T:A	rs234744	T	A	T	SOX2_HMG_3	10	1	-	4.158014636301605	-2.7507401430136156	AAACAATGATAGTTAAA
chr21	43267576	43267577	chr21:43267577:G:A	rs28620758	G	A	.	SOX2_HMG_3	30	0	-	0	0	.
chr21	43267582	43267583	chr21:43267583:A:C	rs28758875	A	C	.	SOX2_HMG_3	24	0	-	0	0	.
chr21	43713008	43713009	chr21:43713009:T:C	rs76891477	T	C	T	SOX2_HMG_3	4	1	-	4.031064159647285	-2.877690619667935	TCTCAATGCAATGGAAA
chr21	43812512	43812513	chr21:43812513:C:T	rs1048179336	C	T	C	SOX2_HMG_3	36	0	+	0	0	.
chr21	43880156	43880157	chr21:43880157:T:A	rs147096178	T	A	T	SOX2_HMG_3	10	1	-	4.380080481937149	-2.5286742973780716	CATCAATTTCATGGGTG
chr21	44332412	44332413	chr21:44332413:T:C	rs3761393	T	C	C	SOX2_HMG_3	-20	0	-	0	0	.
chr21	44447898	44447899	chr21:44447899:C:T	rs9978219	C	T	C	SOX2_HMG_3	7	1	-	1.5387262822561036	-1.1900608383052311	CAGCAATGGCTGTGACT
chr21	44479974	44479975	chr21:44479975:C:A	rs60036065	C	A	C	SOX2_HMG_3	-9	0	+	0	0	.
chr21	44552708	44552709	chr21:44552709:C:T	rs146660912	C	T	C	SOX2_HMG_3	-18	0	-	0	0	.
chr21	44598138	44598139	chr21:44598139:A:G	rs443484	A	G	G	SOX2_HMG_3	9	1	-	3.2879310132470425	2.481260879309996	TGATAATGCTAGTGATG
chr21	44678182	44678183	chr21:44678183:A:G	rs73234839	A	G	A	SOX2_HMG_3	15	1	-	7.18839154203909	4.345682385862232	TATCAATAGGAGTGATA
chr21	44841295	44841296	chr21:44841296:A:G	rs235259	A	G	G	SOX2_HMG_3	26	0	+	0	0	.
chr21	44867252	44867253	chr21:44867253:G:T	rs73238101	G	T	G	SOX2_HMG_3	3	1	-	6.070640393945993	-0.8381143853692261	GAACAGTGTTAGTGATT
chr21	44885997	44885998	chr21:44885998:C:A	rs117989670	C	A	C	SOX2_HMG_3	26	0	-	0	0	.
chr21	45525844	45525845	chr21:45525845:C:T	rs374164733	C	T	C	SOX2_HMG_3	-10	0	+	0	0	.
chr21	45553533	45553534	chr21:45553534:C:T	rs1035184202	C	T	C	SOX2_HMG_3	24	0	+	0	0	.
chr21	45767084	45767085	chr21:45767085:C:T	rs374848917	C	T	C	SOX2_HMG_3	-16	0	+	0	0	.
chr21	46132294	46132295	chr21:46132295:G:A	rs35548026	G	A	G	SOX2_HMG_3	-15	0	-	0	0	.
chr21	46143778	46143779	chr21:46143779:C:T	rs149301880	C	T	C	SOX2_HMG_3	35	0	+	0	0	.
chr21	46162545	46162546	chr21:46162546:C:A	rs116575934	C	A	C	SOX2_HMG_3	-1	0	-	0	0	.
chr21	46475393	46475394	chr21:46475394:G:A	rs2839275	G	A	A	SOX2_HMG_3	-8	0	-	0	0	.
chr21	46515513	46515514	chr21:46515514:G:A	rs150870200	G	A	G	SOX2_HMG_3	22	0	-	0	0	.
chr21	46551019	46551020	chr21:46551020:T:C	rs2839320	T	C	T	SOX2_HMG_3	35	0	+	0	0	.
chr22	10716901	10716902	chr22:10716902:C:T	rs1253256349	C	T	.	SOX2_HMG_3	8	1	+	2.1958034238394126	3.0675397764752748	AATCAATGCTATTCCAT
chr22	10717059	10717060	chr22:10717060:G:C	chr22:10717060:G:C	G	C	.	SOX2_HMG_3	25	0	-	0	0	.
chr22	10717061	10717062	chr22:10717062:C:T	rs878919857	C	T	.	SOX2_HMG_3	23	0	-	0	0	.
chr22	10721715	10721716	chr22:10721716:C:G	rs1227534642	C	G	.	SOX2_HMG_3	13	1	-	4.46527778615636	-2.4434769931588605	ATTCAATGGATTTGAGT
chr22	10727757	10727758	chr22:10727758:A:C	rs1467109072	A	C	.	SOX2_HMG_3	16	1	-	4.0361803855525356	4.839250827328726	AAGGAATGGAATTGAAT
chr22	11036978	11036979	chr22:11036979:A:G	rs1308964339	A	G	.	SOX2_HMG_3	4	1	+	1.803942000473956	-5.104812778841264	GGCCAATGTCATTTTTG
chr22	15815075	15815076	chr22:15815076:C:G	rs7291414	C	G	C	SOX2_HMG_3	31	0	+	0	0	.
chr22	15937055	15937056	chr22:15937056:A:T	rs1384470218	A	T	.	SOX2_HMG_3	1	1	+	4.985740538369267	1.9796966858459513	AAAGAATGTTAGTGAGG
chr22	16824886	16824887	chr22:16824887:G:A	rs9606478	G	A	.	SOX2_HMG_3	-9	0	+	0	0	.
chr22	16851636	16851637	chr22:16851637:G:A	rs146550416	G	A	.	SOX2_HMG_3	32	0	-	0	0	.
chr22	17061643	17061644	chr22:17061644:G:T	rs2845410	G	T	T	SOX2_HMG_3	-14	0	-	0	0	.
chr22	17106768	17106769	chr22:17106769:G:A	rs73381911	G	A	G	SOX2_HMG_3	33	0	-	0	0	.
chr22	17106789	17106790	chr22:17106790:A:G	rs2241049	A	G	a	SOX2_HMG_3	12	1	-	3.241299837603451	-3.6674549417117692	ACTGAATGTTATTGGAA
chr22	17329162	17329163	chr22:17329163:G:A	rs17808489	G	A	G	SOX2_HMG_3	-5	0	-	0	0	.
chr22	17381185	17381186	chr22:17381186:C:T	rs11089174	C	T	T	SOX2_HMG_3	13	1	-	11.529715786135956	4.620961006820735	AATCAATGCCAGTGTAA
chr22	17381713	17381714	chr22:17381714:G:A	rs5747086	G	A	G	SOX2_HMG_3	8	1	+	2.754418503893958	1.9053745565303297	CAGCAGTGGTATTGTGA
chr22	17381715	17381716	chr22:17381716:A:G	rs891748699	A	G	A	SOX2_HMG_3	10	1	+	2.754418503893958	-4.1543362754212625	CAGCAGTGGTATTGTGA
chr22	17451225	17451226	chr22:17451226:T:G	rs5747164	T	G	G	SOX2_HMG_3	14	1	-	4.65700870629893	-2.1752899992677635	TGCCAATTGAAGTGAAG
chr22	17568845	17568846	chr22:17568846:C:T	rs404602	C	T	C	SOX2_HMG_3	33	0	-	0	0	.
chr22	17726729	17726730	chr22:17726730:A:G	rs73378798	A	G	A	SOX2_HMG_3	-6	0	+	0	0	.
chr22	17803959	17803960	chr22:17803960:T:C	rs187464145	T	C	T	SOX2_HMG_3	11	1	+	7.284080980122422	0.5913894818900738	AATCAATGATATGGAGC
chr22	17803964	17803965	chr22:17803965:C:T	rs73382727	C	T	C	SOX2_HMG_3	16	1	+	7.284080980122422	8.480853033262775	AATCAATGATATGGAGC
chr22	17924973	17924974	chr22:17924974:C:T	rs75328607	C	T	C	SOX2_HMG_3	29	0	-	0	0	.
chr22	17943820	17943821	chr22:17943821:C:T	chr22:17943821:C:T	C	T	C	SOX2_HMG_3	26	0	-	0	0	.
chr22	19033902	19033903	chr22:19033903:T:C	rs3865707	T	C	-	SOX2_HMG_3	9	1	+	1.7460962539556175	0.9394261200185726	AGTCAATGTTGATGAGG
chr22	19048332	19048333	chr22:19048333:T:C	rs73384864	T	C	T	SOX2_HMG_3	-9	0	-	0	0	.
chr22	19063364	19063365	chr22:19063365:A:G	rs9617765	A	G	G	SOX2_HMG_3	34	0	+	0	0	.
chr22	19423914	19423915	chr22:19423915:A:G	rs2283653	A	G	G	SOX2_HMG_3	27	0	-	0	0	.
chr22	19620916	19620917	chr22:19620917:A:G	rs9618625	A	G	G	SOX2_HMG_3	15	1	-	4.198132954796858	1.3554237986200002	TAGCACTGACAGTGATG
chr22	19622411	19622412	chr22:19622412:C:T	rs9618630	C	T	C	SOX2_HMG_3	-1	0	+	0	0	.
chr22	19622419	19622420	chr22:19622420:A:G	rs9617814	A	G	G	SOX2_HMG_3	7	1	+	3.8687516565177793	6.597538777079114	GCACAATAGCAGTGAAC
chr22	19648592	19648593	chr22:19648593:T:C	rs528176308	T	C	T	SOX2_HMG_3	4	1	-	7.95289871939252	1.0441439400772974	TGTCAATCTTATTGAGG
chr22	19688724	19688725	chr22:19688725:A:G	rs5993794	A	G	A	SOX2_HMG_3	4	1	+	1.9298726971225821	-4.978882082192637	GAGCAATGGCCTTGGAG
chr22	19723281	19723282	chr22:19723282:C:T	rs185431344	C	T	C	SOX2_HMG_3	-18	0	+	0	0	.
chr22	19870651	19870652	chr22:19870652:A:C	rs78190485	A	C	A	SOX2_HMG_3	33	0	-	0	0	.
chr22	19998933	19998934	chr22:19998934:C:G	rs1008044760	C	G	C	SOX2_HMG_3	11	1	-	1.3338406748708218	-3.941770854141576	CAGCAAGGCCAGTGACA
chr22	20000643	20000644	chr22:20000644:G:A	rs4819852	G	A	G	SOX2_HMG_3	-2	0	+	0	0	.
chr22	20038128	20038129	chr22:20038129:C:T	rs73150856	C	T	C	SOX2_HMG_3	-3	0	+	0	0	.
chr22	20419189	20419190	chr22:20419190:G:C	rs58803203	G	C	C	SOX2_HMG_3	31	0	-	0	0	.
chr22	20419230	20419231	chr22:20419231:G:C	rs738088	G	C	C	SOX2_HMG_3	-10	0	-	0	0	.
chr22	20532134	20532135	chr22:20532135:C:T	rs114996979	C	T	C	SOX2_HMG_3	33	0	+	0	0	.
chr22	20624100	20624101	chr22:20624101:C:G	rs73159169	C	G	c	SOX2_HMG_3	28	0	-	0	0	.
chr22	20748684	20748685	chr22:20748685:G:A	rs738057	G	A	g	SOX2_HMG_3	-6	0	+	0	0	.
chr22	20764361	20764362	chr22:20764362:G:A	rs9917585	G	A	G	SOX2_HMG_3	-12	0	-	0	0	.
chr22	21010559	21010560	chr22:21010560:T:C	rs395938	T	C	C	SOX2_HMG_3	10	1	-	1.325683880577072	-5.583070898738149	GGGGAATGCCAGTGAAT
chr22	21010577	21010578	chr22:21010578:T:A	rs2516545	T	A	T	SOX2_HMG_3	-8	0	-	0	0	.
chr22	21857590	21857591	chr22:21857591:T:C	rs11913120	T	C	T	SOX2_HMG_3	5	1	-	3.029980716077445	-3.8787740632377754	TTACAATGGTATGGAAG
chr22	21906235	21906236	chr22:21906236:G:A	rs240049	G	A	A	SOX2_HMG_3	9	1	-	2.564928001690342	3.371598135627388	AAGCAAATACATTGAGG
chr22	21908028	21908029	chr22:21908029:A:G	rs8143081	A	G	A	SOX2_HMG_3	21	0	+	0	0	.
chr22	22046143	22046144	chr22:22046144:G:C	rs61092423	G	C	c	SOX2_HMG_3	0	1	-	1.2689119060495104	2.013978807760833	CGGCTATGACAGTGAAG
chr22	22060418	22060419	chr22:22060419:G:A	rs5756711	G	A	a	SOX2_HMG_3	3	1	-	3.052970077687997	-3.8557847016272224	CAGCAATGGAAATGTTG
chr22	22061343	22061344	chr22:22061344:C:T	rs12484080	C	T	c	SOX2_HMG_3	3	1	+	3.8293445381649884	-3.079410241150231	CAGCTATGCCATTGAAT
chr22	22085654	22085655	chr22:22085655:C:G	rs17555104	C	G	g	SOX2_HMG_3	-1	0	-	0	0	.
chr22	22131255	22131256	chr22:22131256:A:C	chr22:22131256:A:C	A	C	.	SOX2_HMG_3	2	1	+	5.991090051445922	4.855332815808376	ACACAATTGAATTGAGA
chr22	22214282	22214283	chr22:22214283:C:T	rs111894887	C	T	.	SOX2_HMG_3	23	0	+	0	0	.
chr22	22235703	22235704	chr22:22235704:T:C	rs1894238	T	C	.	SOX2_HMG_3	-11	0	-	0	0	.
chr22	22514811	22514812	chr22:22514812:G:A	rs150588157	G	A	G	SOX2_HMG_3	-20	0	+	0	0	.
chr22	22571262	22571263	chr22:22571263:T:A	rs2097206	T	A	t	SOX2_HMG_3	22	0	-	0	0	.
chr22	22571510	22571511	chr22:22571511:C:T	rs6002786	C	T	t	SOX2_HMG_3	22	0	+	0	0	.
chr22	22632468	22632469	chr22:22632469:T:C	rs57741889	T	C	.	SOX2_HMG_3	18	0	+	0	0	.
chr22	22660228	22660229	chr22:22660229:C:T	rs455578	C	T	.	SOX2_HMG_3	-7	0	-	0	0	.
chr22	22753062	22753063	chr22:22753063:C:T	rs28370403	C	T	.	SOX2_HMG_3	30	0	+	0	0	.
chr22	22753065	22753066	chr22:22753066:A:G	rs28398287	A	G	.	SOX2_HMG_3	33	0	+	0	0	.
chr22	22812884	22812885	chr22:22812885:A:G	rs62218782	A	G	.	SOX2_HMG_3	-9	0	-	0	0	.
chr22	22902088	22902089	chr22:22902089:T:C	rs4822340	T	C	.	SOX2_HMG_3	11	1	+	2.9409401937512025	-3.751751304481146	AGTCAATGTCATGGTCT
chr22	22909671	22909672	chr22:22909672:C:T	rs5759524	C	T	.	SOX2_HMG_3	9	1	+	6.300981148426276	7.107651282363323	GTTCTATTTCATTGATG
chr22	22952565	22952566	chr22:22952566:C:A	rs546959547	C	A	C	SOX2_HMG_3	28	0	-	0	0	.
chr22	22981967	22981968	chr22:22981968:C:T	rs2096534	C	T	T	SOX2_HMG_3	-12	0	-	0	0	.
chr22	23041682	23041683	chr22:23041683:A:G	rs4434089	A	G	A	SOX2_HMG_3	-3	0	-	0	0	.
chr22	23353216	23353217	chr22:23353217:T:C	rs4820550	T	C	t	SOX2_HMG_3	-11	0	+	0	0	.
chr22	23517508	23517509	chr22:23517509:G:T	rs114090144	G	T	g	SOX2_HMG_3	-10	0	+	0	0	.
chr22	23517552	23517553	chr22:23517553:T:A	rs184059905	T	A	t	SOX2_HMG_3	34	0	+	0	0	.
chr22	23525573	23525574	chr22:23525574:G:C	rs147354058	G	C	g	SOX2_HMG_3	17	0	+	0	0	.
chr22	23890537	23890538	chr22:23890538:G:A	rs7287669	G	A	G	SOX2_HMG_3	26	0	+	0	0	.
chr22	23910632	23910633	chr22:23910633:C:T	rs7291874	C	T	C	SOX2_HMG_3	-10	0	+	0	0	.
chr22	23910654	23910655	chr22:23910655:T:C	rs5751770	T	C	T	SOX2_HMG_3	12	1	+	9.45502169690502	2.546266917589799	GGTCAAGGCTATTGATG
chr22	24108002	24108003	chr22:24108003:C:A	rs142974005	C	A	C	SOX2_HMG_3	13	1	-	2.2823565956541128	-4.626398183661108	AGACAATGCTCGTGAGG
chr22	24108023	24108024	chr22:24108024:C:T	rs176157	C	T	C	SOX2_HMG_3	-8	0	-	0	0	.
chr22	24259597	24259598	chr22:24259598:A:G	rs9612596	A	G	-	SOX2_HMG_3	35	0	-	0	0	.
chr22	24444707	24444708	chr22:24444708:C:T	rs17004921	C	T	C	SOX2_HMG_3	-20	0	+	0	0	.
chr22	24445566	24445567	chr22:24445567:T:C	rs562548070	T	C	T	SOX2_HMG_3	24	0	-	0	0	.
chr22	24631676	24631677	chr22:24631677:G:A	rs73879098	G	A	G	SOX2_HMG_3	33	0	+	0	0	.
chr22	24765388	24765389	chr22:24765389:C:T	rs5760625	C	T	T	SOX2_HMG_3	16	1	-	3.710601974715327	3.4369143583250557	CTTCAAGTTTAGTGAAG
chr22	24966009	24966010	chr22:24966010:T:C	rs5996800	T	C	C	SOX2_HMG_3	28	0	+	0	0	.
chr22	25085247	25085248	chr22:25085248:A:G	rs6004430	A	G	A	SOX2_HMG_3	6	1	-	5.088085593562218	-1.8206691857530017	AAACAATGGCTTTGAAT
chr22	25110811	25110812	chr22:25110812:C:T	rs713989	C	T	C	SOX2_HMG_3	21	0	-	0	0	.
chr22	25269116	25269117	chr22:25269117:G:C	rs2330968	G	C	g	SOX2_HMG_3	24	0	+	0	0	.
chr22	25438374	25438375	chr22:25438375:C:T	rs5761069	C	T	-	SOX2_HMG_3	-8	0	-	0	0	.
chr22	25510835	25510836	chr22:25510836:A:G	rs476240	A	G	A	SOX2_HMG_3	-20	0	+	0	0	.
chr22	25510843	25510844	chr22:25510844:C:T	rs476279	C	T	T	SOX2_HMG_3	-12	0	+	0	0	.
chr22	25511937	25511938	chr22:25511938:C:A	rs507715	C	A	C	SOX2_HMG_3	-18	0	-	0	0	.
chr22	25514876	25514877	chr22:25514877:G:C	rs686025	G	C	C	SOX2_HMG_3	7	1	+	2.689206008220599	-4.043636203215375	AGACAATGTATGTGATA
chr22	25746524	25746525	chr22:25746525:A:C	rs133856	A	C	C	SOX2_HMG_3	-11	0	-	0	0	.
chr22	25775795	25775796	chr22:25775796:C:T	rs116308924	C	T	T	SOX2_HMG_3	24	0	-	0	0	.
chr22	25970019	25970020	chr22:25970020:A:G	rs114921896	A	G	A	SOX2_HMG_3	30	0	-	0	0	.
chr22	25996267	25996268	chr22:25996268:A:G	rs5761347	A	G	A	SOX2_HMG_3	27	0	-	0	0	.
chr22	26196941	26196942	chr22:26196942:G:C	rs1474602	G	C	G	SOX2_HMG_3	23	0	-	0	0	.
chr22	26199571	26199572	chr22:26199572:C:T	rs9613126	C	T	C	SOX2_HMG_3	19	0	+	0	0	.
chr22	26265533	26265534	chr22:26265534:G:A	rs4640491	G	A	G	SOX2_HMG_3	34	0	-	0	0	.
chr22	26322299	26322300	chr22:26322300:C:G	rs77238721	C	G	T	SOX2_HMG_3	34	0	-	0	0	.
chr22	26325813	26325814	chr22:26325814:C:T	rs62225710	C	T	C	SOX2_HMG_3	36	0	-	0	0	.
chr22	26496590	26496591	chr22:26496591:T:C	rs77618549	T	C	T	SOX2_HMG_3	-2	0	+	0	0	.
chr22	26555622	26555623	chr22:26555623:G:A	rs4820685	G	A	G	SOX2_HMG_3	17	0	-	0	0	.
chr22	26642888	26642889	chr22:26642889:A:G	rs5761655	A	G	A	SOX2_HMG_3	-1	0	+	0	0	.
chr22	26642900	26642901	chr22:26642901:G:T	rs5752371	G	T	G	SOX2_HMG_3	11	1	+	1.369138071279849	2.7862180404997976	GGACAAAAGCAGTGATG
chr22	26645345	26645346	chr22:26645346:C:T	rs190325753	C	T	C	SOX2_HMG_3	-7	0	+	0	0	.
chr22	26645378	26645379	chr22:26645379:C:T	rs866111829	C	T	C	SOX2_HMG_3	26	0	+	0	0	.
chr22	26650697	26650698	chr22:26650698:A:T	rs4822760	A	T	A	SOX2_HMG_3	-17	0	-	0	0	.
chr22	26725400	26725401	chr22:26725401:A:G	rs5761705	A	G	A	SOX2_HMG_3	34	0	-	0	0	.
chr22	26770576	26770577	chr22:26770577:A:G	rs5752409	A	G	G	SOX2_HMG_3	22	0	-	0	0	.
chr22	26953270	26953271	chr22:26953271:T:G	rs966560	T	G	G	SOX2_HMG_3	24	0	+	0	0	.
chr22	27063759	27063760	chr22:27063760:G:C	rs2331366	G	C	G	SOX2_HMG_3	28	0	+	0	0	.
chr22	27097566	27097567	chr22:27097567:C:T	rs62222832	C	T	C	SOX2_HMG_3	-6	0	+	0	0	.
chr22	27097607	27097608	chr22:27097608:C:G	rs760533	C	G	C	SOX2_HMG_3	35	0	+	0	0	.
chr22	27175212	27175213	chr22:27175213:G:A	rs527647716	G	A	G	SOX2_HMG_3	-15	0	+	0	0	.
chr22	27219343	27219344	chr22:27219344:T:C	rs715601	T	C	C	SOX2_HMG_3	4	1	-	1.7395967836527533	-5.1691579956624665	GGTCAGTGCCATTTATG
chr22	27225033	27225034	chr22:27225034:T:C	rs75860721	T	C	T	SOX2_HMG_3	29	0	-	0	0	.
chr22	27238837	27238838	chr22:27238838:G:C	rs512856	G	C	A	SOX2_HMG_3	-11	0	+	0	0	.
chr22	27248987	27248988	chr22:27248988:A:G	rs552212	A	G	A	SOX2_HMG_3	-19	0	+	0	0	.
chr22	27370356	27370357	chr22:27370357:T:C	rs4820754	T	C	C	SOX2_HMG_3	6	1	+	5.929292771059958	-0.9794620082552621	ACTCAATATTGTTGATA
chr22	27406469	27406470	chr22:27406470:A:G	rs16984531	A	G	A	SOX2_HMG_3	4	1	+	4.8716752930941905	-2.037079486221029	AAACAATGGCAATGAGT
chr22	27513144	27513145	chr22:27513145:A:G	rs5762222	A	G	G	SOX2_HMG_3	-9	0	-	0	0	.
chr22	27527608	27527609	chr22:27527609:T:C	rs953825875	T	C	T	SOX2_HMG_3	28	0	+	0	0	.
chr22	27636865	27636866	chr22:27636866:G:A	rs4822926	G	A	A	SOX2_HMG_3	11	1	+	0.9084634988552502	-4.367148030157148	CATCAGTGGCAGGGAAG
chr22	27637049	27637050	chr22:27637050:A:G	rs17468634	A	G	A	SOX2_HMG_3	-11	0	+	0	0	.
chr22	27637064	27637065	chr22:27637065:A:G	rs134003	A	G	A	SOX2_HMG_3	4	1	+	3.224324066430417	-3.6844307128848053	TATCAATGGCGGTGGAA
chr22	28399091	28399092	chr22:28399092:T:C	rs2346395	T	C	T	SOX2_HMG_3	23	0	+	0	0	.
chr22	28399093	28399094	chr22:28399094:T:C	rs142275913	T	C	T	SOX2_HMG_3	25	0	+	0	0	.
chr22	28422041	28422042	chr22:28422042:A:G	rs16986400	A	G	G	SOX2_HMG_3	-16	0	+	0	0	.
chr22	28802162	28802163	chr22:28802163:T:G	rs3788409	T	G	G	SOX2_HMG_3	8	1	+	3.9018976817254307	3.7644297618607667	GGTCAATTTTATTTTGG
chr22	28809015	28809016	chr22:28809016:G:A	rs5752803	G	A	G	SOX2_HMG_3	-9	0	+	0	0	.
chr22	28918910	28918911	chr22:28918911:T:C	rs469992	T	C	T	SOX2_HMG_3	-1	0	-	0	0	.
chr22	29016938	29016939	chr22:29016939:C:G	rs114567405	C	G	C	SOX2_HMG_3	-13	0	+	0	0	.
chr22	29065161	29065162	chr22:29065162:T:A	rs134561	T	A	T	SOX2_HMG_3	8	1	+	2.2619197740754036	1.2754079068471125	TGTGAATGTTATTAATA
chr22	29601584	29601585	chr22:29601585:T:C	rs715490	T	C	T	SOX2_HMG_3	6	1	+	6.064845502994698	-0.8439092763205218	AAGCAATGATAATGAAG
chr22	29887514	29887515	chr22:29887515:T:C	rs73161099	T	C	T	SOX2_HMG_3	-1	0	-	0	0	.
chr22	29995000	29995001	chr22:29995001:T:C	rs3788423	T	C	C	SOX2_HMG_3	5	1	-	5.6660024747355955	-1.2427523045796267	AGTCAATTGCAATGAGG
chr22	30009993	30009994	chr22:30009994:G:A	rs41158	G	A	G	SOX2_HMG_3	-5	0	-	0	0	.
chr22	30039412	30039413	chr22:30039413:G:A	rs5753002	G	A	G	SOX2_HMG_3	-1	0	-	0	0	.
chr22	30044543	30044544	chr22:30044544:G:A	rs41178	G	A	G	SOX2_HMG_3	8	1	-	5.932070703119296	6.8038070557551595	GATCAATTCAAATGAGG
chr22	30062403	30062404	chr22:30062404:T:A	rs73883363	T	A	-	SOX2_HMG_3	23	0	+	0	0	.
chr22	30161008	30161009	chr22:30161009:G:A	rs780126236	G	A	G	SOX2_HMG_3	17	0	+	0	0	.
chr22	30185732	30185733	chr22:30185733:C:T	rs5753037	C	T	C	SOX2_HMG_3	35	0	+	0	0	.
chr22	30196925	30196926	chr22:30196926:C:T	rs149802821	C	T	C	SOX2_HMG_3	1	1	+	4.960077828205392	4.960077828205392	TCTCAATGTAAATGAGG
chr22	30311582	30311583	chr22:30311583:T:A	chr22:30311583:T:A	T	A	T	SOX2_HMG_3	27	0	-	0	0	.
chr22	30382469	30382470	chr22:30382470:A:G	rs17658238	A	G	G	SOX2_HMG_3	-14	0	-	0	0	.
chr22	30421098	30421099	chr22:30421099:G:C	rs141780718	G	C	G	SOX2_HMG_3	-19	0	-	0	0	.
chr22	30458675	30458676	chr22:30458676:G:A	rs4820851	G	A	g	SOX2_HMG_3	-19	0	+	0	0	.
chr22	30610564	30610565	chr22:30610565:G:A	rs5753233	G	A	G	SOX2_HMG_3	27	0	-	0	0	.
chr22	30784690	30784691	chr22:30784691:G:A	rs12165718	G	A	g	SOX2_HMG_3	-17	0	-	0	0	.
chr22	30824724	30824725	chr22:30824725:G:T	rs76915174	G	T	G	SOX2_HMG_3	18	0	-	0	0	.
chr22	30924683	30924684	chr22:30924684:C:T	rs775047848	C	T	C	SOX2_HMG_3	26	0	-	0	0	.
chr22	31086492	31086493	chr22:31086493:A:G	rs115035456	A	G	A	SOX2_HMG_3	26	0	+	0	0	.
chr22	31633364	31633365	chr22:31633365:C:G	rs111697884	C	G	C	SOX2_HMG_3	17	0	-	0	0	.
chr22	31633379	31633380	chr22:31633380:C:A	rs113992242	C	A	C	SOX2_HMG_3	2	1	-	5.66361435358517	9.531229188263211	AAGCAATGCCAGTGGAT
chr22	31764877	31764878	chr22:31764878:A:G	rs74459381	A	G	A	SOX2_HMG_3	5	1	+	2.340858067679091	-4.567896711636129	GATCAATTGTGTTGCTT
chr22	31815425	31815426	chr22:31815426:A:C	rs5749334	A	C	C	SOX2_HMG_3	1	1	+	0.8437223325497589	-2.1623215199735566	GATAAAGTGCAGTGATG
chr22	31953075	31953076	chr22:31953076:T:C	rs2246704	T	C	C	SOX2_HMG_3	17	0	-	0	0	.
chr22	32123822	32123823	chr22:32123823:A:C	rs117129307	A	C	A	SOX2_HMG_3	2	1	-	3.9409991251736414	0.0733842904956008	TGTCAGTTTCAGTGAAG
chr22	32261505	32261506	chr22:32261506:T:C	rs5994517	T	C	N	SOX2_HMG_3	22	0	-	0	0	.
chr22	32266586	32266587	chr22:32266587:C:T	rs59016399	C	T	c	SOX2_HMG_3	-1	0	+	0	0	.
chr22	32283655	32283656	chr22:32283656:C:T	rs5998378	C	T	c	SOX2_HMG_3	-8	0	+	0	0	.
chr22	32284274	32284275	chr22:32284275:G:A	rs12158623	G	A	g	SOX2_HMG_3	3	1	-	2.9267217411787243	-3.9820330381364952	AATCTATTTTAATGATA
chr22	32305952	32305953	chr22:32305953:T:G	rs9606935	T	G	t	SOX2_HMG_3	6	1	+	1.0264055856197856	-5.882349193695433	TGCCATTGGCATTGAGT
chr22	32305980	32305981	chr22:32305981:G:A	rs9609501	G	A	g	SOX2_HMG_3	34	0	+	0	0	.
chr22	32344048	32344049	chr22:32344049:C:T	rs5749406	C	T	t	SOX2_HMG_3	-6	0	+	0	0	.
chr22	32344056	32344057	chr22:32344057:G:A	rs2076034	G	A	g	SOX2_HMG_3	2	1	+	1.2561529111295364	1.2561529111295364	GCGCTATGGCAGTGAGG
chr22	32512750	32512751	chr22:32512751:T:C	rs1056484	T	C	T	SOX2_HMG_3	30	0	-	0	0	.
chr22	32534663	32534664	chr22:32534664:G:A	rs116712337	G	A	G	SOX2_HMG_3	-18	0	+	0	0	.
chr22	32735368	32735369	chr22:32735369:G:A	rs3788497	G	A	G	SOX2_HMG_3	-13	0	+	0	0	.
chr22	32744812	32744813	chr22:32744813:C:T	rs5998611	C	T	C	SOX2_HMG_3	28	0	+	0	0	.
chr22	32836559	32836560	chr22:32836560:T:C	rs8142834	T	C	C	SOX2_HMG_3	15	1	-	7.246047030537987	6.813573448987087	AATCAATAGCACTGAAG
chr22	32977340	32977341	chr22:32977341:G:A	rs73162032	G	A	G	SOX2_HMG_3	26	0	+	0	0	.
chr22	32998081	32998082	chr22:32998082:C:T	rs133931	C	T	C	SOX2_HMG_3	-16	0	-	0	0	.
chr22	33035178	33035179	chr22:33035179:G:A	rs8138938	G	A	A	SOX2_HMG_3	7	1	+	6.637946339036727	3.909159218475392	TAACAATGATAATGATG
chr22	33105908	33105909	chr22:33105909:A:G	rs5754430	A	G	A	SOX2_HMG_3	33	0	-	0	0	.
chr22	33525119	33525120	chr22:33525120:G:A	rs138202536	G	A	G	SOX2_HMG_3	11	1	+	2.4659777230852162	-2.8096338059271817	ACTCAAGTCAAGTGATA
chr22	33525262	33525263	chr22:33525263:T:C	rs5998994	T	C	C	SOX2_HMG_3	21	0	-	0	0	.
chr22	33563756	33563757	chr22:33563757:G:A	rs62227071	G	A	G	SOX2_HMG_3	13	1	+	2.198111583179523	-4.710643196135698	TGTCATTGTTAGTGTCA
chr22	33626984	33626985	chr22:33626985:T:C	rs240589	T	C	T	SOX2_HMG_3	-11	0	-	0	0	.
chr22	33674686	33674687	chr22:33674687:A:G	rs4821171	A	G	G	SOX2_HMG_3	14	1	-	0.8866697835769899	-3.232855077175409	GACCAATGGGAGTGTGT
chr22	33792958	33792959	chr22:33792959:T:C	rs57936677	T	C	T	SOX2_HMG_3	-18	0	-	0	0	.
chr22	34395745	34395746	chr22:34395746:T:C	rs34045827	T	C	T	SOX2_HMG_3	15	1	-	3.5298787111537897	3.0974051296028886	GCTCAATGCTATTATAT
chr22	34854495	34854496	chr22:34854496:A:G	rs7285148	A	G	A	SOX2_HMG_3	24	0	-	0	0	.
chr22	35124890	35124891	chr22:35124891:T:C	rs56395426	T	C	T	SOX2_HMG_3	11	1	+	1.974920474568397	-4.71777102366395	AGGCAAAGACATTGAGT
chr22	35406667	35406668	chr22:35406668:C:G	rs2307340	C	G	C	SOX2_HMG_3	11	1	-	2.492291347615282	-2.783320181397116	TGGCAATGTTGGTGAGG
chr22	35407607	35407608	chr22:35407608:A:G	rs4645766	A	G	A	SOX2_HMG_3	-15	0	-	0	0	.
chr22	35485487	35485488	chr22:35485488:T:C	rs28688703	T	C	T	SOX2_HMG_3	-15	0	-	0	0	.
chr22	35622394	35622395	chr22:35622395:A:G	rs8136969	A	G	G	SOX2_HMG_3	26	0	+	0	0	.
chr22	35910335	35910336	chr22:35910336:C:T	rs145516367	C	T	C	SOX2_HMG_3	33	0	+	0	0	.
chr22	35910545	35910546	chr22:35910546:G:T	rs5755990	G	T	T	SOX2_HMG_3	-12	0	+	0	0	.
chr22	36084236	36084237	chr22:36084237:G:T	rs116969389	G	T	g	SOX2_HMG_3	16	1	-	2.8127591115858364	4.538913990112109	AATCACTTGAAGTGAGC
chr22	36145676	36145677	chr22:36145677:G:T	rs1807672	G	T	T	SOX2_HMG_3	31	0	+	0	0	.
chr22	36265599	36265600	chr22:36265600:G:A	rs136176	G	A	a	SOX2_HMG_3	-16	0	-	0	0	.
chr22	36528107	36528108	chr22:36528108:C:A	rs34387030	C	A	C	SOX2_HMG_3	-7	0	-	0	0	.
chr22	36734566	36734567	chr22:36734567:A:G	rs147897770	A	G	A	SOX2_HMG_3	15	1	-	5.0014449176470475	2.158735761470189	AATCAATGTCAGTCTTC
chr22	36856757	36856758	chr22:36856758:G:C	rs6000452	G	C	C	SOX2_HMG_3	28	0	-	0	0	.
chr22	36880242	36880243	chr22:36880243:C:A	rs5750326	C	A	C	SOX2_HMG_3	-16	0	+	0	0	.
chr22	36893142	36893143	chr22:36893143:A:G	rs73883946	A	G	A	SOX2_HMG_3	36	0	-	0	0	.
chr22	36950571	36950572	chr22:36950572:G:A	rs9622514	G	A	g	SOX2_HMG_3	-20	0	+	0	0	.
chr22	36950607	36950608	chr22:36950608:G:A	rs9622515	G	A	g	SOX2_HMG_3	16	1	+	9.515556917601417	9.241869301211146	AGTCAATGTCACTGATG
chr22	36986270	36986271	chr22:36986271:A:G	rs77827656	A	G	A	SOX2_HMG_3	11	1	-	2.2436070077816375	-4.4490844904507085	GTTCTATGTTATAGATG
chr22	36986276	36986277	chr22:36986277:T:C	rs9610622	T	C	T	SOX2_HMG_3	5	1	-	2.2436070077816375	-4.665147771533581	GTTCTATGTTATAGATG
chr22	37051377	37051378	chr22:37051378:G:C	rs74844925	G	C	G	SOX2_HMG_3	7	1	+	3.3320804449460066	-3.4007617664899685	GGTCAATGCTATGGGGA
chr22	37168425	37168426	chr22:37168426:G:A	rs1023700820	G	A	G	SOX2_HMG_3	-17	0	+	0	0	.
chr22	37168436	37168437	chr22:37168437:G:A	rs4820269	G	A	G	SOX2_HMG_3	-6	0	+	0	0	.
chr22	37193677	37193678	chr22:37193678:G:A	rs189810126	G	A	G	SOX2_HMG_3	-15	0	-	0	0	.
chr22	37197458	37197459	chr22:37197459:G:A	rs78728597	G	A	G	SOX2_HMG_3	-7	0	+	0	0	.
chr22	37279868	37279869	chr22:37279869:A:C	rs142669033	A	C	A	SOX2_HMG_3	-8	0	+	0	0	.
chr22	37354306	37354307	chr22:37354307:T:C	rs4821636	T	C	T	SOX2_HMG_3	-18	0	+	0	0	.
chr22	37354308	37354309	chr22:37354309:T:C	rs2899289	T	C	C	SOX2_HMG_3	-16	0	+	0	0	.
chr22	37711954	37711955	chr22:37711955:C:T	rs5756784	C	T	T	SOX2_HMG_3	0	1	+	1.0694246380188595	0.9320956599701959	CGTCAATGCCTGTGGAG
chr22	37848902	37848903	chr22:37848903:T:C	chr22:37848903:T:C	T	C	T	SOX2_HMG_3	30	0	-	0	0	.
chr22	37904959	37904960	chr22:37904960:A:T	rs4821723	A	T	T	SOX2_HMG_3	0	1	+	5.381333388082863	4.719531787408169	AGTCAATAGAATTTATG
chr22	38135527	38135528	chr22:38135528:G:A	rs867435302	G	A	G	SOX2_HMG_3	-14	0	-	0	0	.
chr22	38166417	38166418	chr22:38166418:A:G	rs6001035	A	G	A	SOX2_HMG_3	15	1	-	5.422184960827145	2.579475804650287	TCTAAATTTTATTGATT
chr22	38196959	38196960	chr22:38196960:G:A	rs2413505	G	A	G	SOX2_HMG_3	3	1	-	1.1848057954112592	-5.723948983903961	CAGCACTGGCATTGGAG
chr22	38199475	38199476	chr22:38199476:G:A	rs3761446	G	A	G	SOX2_HMG_3	-19	0	+	0	0	.
chr22	38199528	38199529	chr22:38199529:C:T	rs112457503	C	T	C	SOX2_HMG_3	34	0	+	0	0	.
chr22	38204947	38204948	chr22:38204948:A:G	rs73154441	A	G	A	SOX2_HMG_3	21	0	+	0	0	.
chr22	38699647	38699648	chr22:38699648:T:C	rs149593440	T	C	T	SOX2_HMG_3	9	1	+	9.800787308759372	8.994117174822327	GATAAATGGTAGTGATT
chr22	38704640	38704641	chr22:38704641:A:G	rs41280833	A	G	A	SOX2_HMG_3	32	0	-	0	0	.
chr22	39003732	39003733	chr22:39003733:T:C	rs4315626	T	C	N	SOX2_HMG_3	23	0	+	0	0	.
chr22	39008538	39008539	chr22:39008539:G:T	rs146605820	G	T	G	SOX2_HMG_3	-1	0	-	0	0	.
chr22	39148288	39148289	chr22:39148289:G:A	rs2235686	G	A	G	SOX2_HMG_3	-17	0	+	0	0	.
chr22	39219954	39219955	chr22:39219955:C:T	rs12484319	C	T	C	SOX2_HMG_3	-13	0	-	0	0	.
chr22	39298119	39298120	chr22:39298120:G:A	rs9611138	G	A	G	SOX2_HMG_3	36	0	-	0	0	.
chr22	39304752	39304753	chr22:39304753:C:T	rs17000979	C	T	C	SOX2_HMG_3	24	0	-	0	0	.
chr22	39601624	39601625	chr22:39601625:C:T	rs713865	C	T	C	SOX2_HMG_3	-7	0	+	0	0	.
chr22	39629038	39629039	chr22:39629039:C:T	rs136813	C	T	C	SOX2_HMG_3	5	1	-	0.19682322679513542	7.105578006110356	CCTCAGTGGCAGTGGGG
chr22	39734909	39734910	chr22:39734910:C:G	rs6001666	C	G	G	SOX2_HMG_3	16	1	-	1.862301826290133	-0.13754066862641068	TGGCAATGCTCTTGACG
chr22	39929156	39929157	chr22:39929157:C:T	rs137980	C	T	C	SOX2_HMG_3	29	0	+	0	0	.
chr22	40208940	40208941	chr22:40208941:T:G	rs4820408	T	G	G	SOX2_HMG_3	27	0	+	0	0	.
chr22	40213644	40213645	chr22:40213645:A:G	rs74893831	A	G	A	SOX2_HMG_3	16	1	+	4.100357906285833	4.374045522676104	TAACAATCACAGTGATA
chr22	40323731	40323732	chr22:40323732:G:C	rs12485008	G	C	G	SOX2_HMG_3	-7	0	-	0	0	.
chr22	40707904	40707905	chr22:40707905:A:T	rs6002039	A	T	T	SOX2_HMG_3	-7	0	-	0	0	.
chr22	40727462	40727463	chr22:40727463:G:A	rs6002081	G	A	g	SOX2_HMG_3	-20	0	+	0	0	.
chr22	40728987	40728988	chr22:40728988:C:T	rs8136514	C	T	C	SOX2_HMG_3	15	1	+	0.045723681106436986	2.8884328372832955	GATCTATGGCCGTGACG
chr22	40728990	40728991	chr22:40728991:T:G	chr22:40728991:T:G	T	G	T	SOX2_HMG_3	18	0	+	0	0	.
chr22	41074308	41074309	chr22:41074309:A:G	rs5758212	A	G	A	SOX2_HMG_3	14	1	+	5.304436442797297	1.122558825496178	GAGCAATGATCTTGATC
chr22	41445730	41445731	chr22:41445731:C:T	rs10212032	C	T	C	SOX2_HMG_3	17	0	-	0	0	.
chr22	41670928	41670929	chr22:41670929:C:T	rs9306354	C	T	C	SOX2_HMG_3	-8	0	+	0	0	.
chr22	41826462	41826463	chr22:41826463:C:A	rs191226652	C	A	C	SOX2_HMG_3	1	1	-	7.083144146759238	5.908747884315213	TGTCAAGGGCAGTGATG
chr22	41826469	41826470	chr22:41826470:T:C	rs150841972	T	C	T	SOX2_HMG_3	-6	0	-	0	0	.
chr22	42022105	42022106	chr22:42022106:T:A	rs9607869	T	A	T	SOX2_HMG_3	32	0	-	0	0	.
chr22	42152888	42152889	chr22:42152889:A:G	rs2743467	A	G	G	SOX2_HMG_3	5	1	+	1.9146063042765191	-4.994148475038701	CCCCAATGGAAGTGGTT
chr22	42687038	42687039	chr22:42687039:C:A	rs130389	C	A	A	SOX2_HMG_3	3	1	+	8.209459733064174	1.3007049537489521	TGTCAATGTTCTTGAAG
chr22	42701507	42701508	chr22:42701508:G:A	rs5758873	G	A	g	SOX2_HMG_3	-20	0	-	0	0	.
chr22	42774875	42774876	chr22:42774876:C:T	rs7285149	C	T	t	SOX2_HMG_3	-17	0	+	0	0	.
chr22	42784411	42784412	chr22:42784412:A:C	rs5758938	A	C	C	SOX2_HMG_3	17	0	+	0	0	.
chr22	42791824	42791825	chr22:42791825:C:T	rs187658869	C	T	C	SOX2_HMG_3	-9	0	-	0	0	.
chr22	43002955	43002956	chr22:43002956:C:T	rs738378	C	T	T	SOX2_HMG_3	30	0	+	0	0	.
chr22	43005072	43005073	chr22:43005073:G:A	rs5759082	G	A	G	SOX2_HMG_3	1	1	+	1.3545182712229455	3.1861658613022357	GGGCAATGGTACTGTGT
chr22	43011457	43011458	chr22:43011458:C:T	rs5759091	C	T	C	SOX2_HMG_3	33	0	-	0	0	.
chr22	43018721	43018722	chr22:43018722:C:T	rs118178599	C	T	C	SOX2_HMG_3	30	0	+	0	0	.
chr22	43371072	43371073	chr22:43371073:A:G	rs695396	A	G	G	SOX2_HMG_3	33	0	+	0	0	.
chr22	43404759	43404760	chr22:43404760:C:A	rs9608024	C	A	C	SOX2_HMG_3	-20	0	-	0	0	.
chr22	43890435	43890436	chr22:43890436:T:C	rs713831	T	C	T	SOX2_HMG_3	21	0	+	0	0	.
chr22	43915820	43915821	chr22:43915821:G:A	rs9917616	G	A	G	SOX2_HMG_3	21	0	+	0	0	.
chr22	43939525	43939526	chr22:43939526:C:A	rs35621602	C	A	C	SOX2_HMG_3	-10	0	-	0	0	.
chr22	43939535	43939536	chr22:43939536:C:T	rs34352134	C	T	C	SOX2_HMG_3	-20	0	-	0	0	.
chr22	44366876	44366877	chr22:44366877:C:G	rs79282335	C	G	C	SOX2_HMG_3	3	1	+	1.474913553598402	-5.433841225716819	CAGCAAAGATAGTGAGC
chr22	44366881	44366882	chr22:44366882:A:G	rs59632281	A	G	A	SOX2_HMG_3	8	1	+	1.474913553598402	2.323957500962031	CAGCAAAGATAGTGAGC
chr22	44404133	44404134	chr22:44404134:C:T	rs12106627	C	T	C	SOX2_HMG_3	16	1	-	1.4756864617170669	1.2019988453267954	AGGCAATGCCAGGGAGG
chr22	44448729	44448730	chr22:44448730:G:A	rs959301079	G	A	G	SOX2_HMG_3	-18	0	+	0	0	.
chr22	44537196	44537197	chr22:44537197:T:A	rs6007188	T	A	T	SOX2_HMG_3	21	0	+	0	0	.
chr22	44538106	44538107	chr22:44538107:C:T	rs2076096	C	T	C	SOX2_HMG_3	23	0	-	0	0	.
chr22	44538128	44538129	chr22:44538129:G:C	rs2076097	G	C	G	SOX2_HMG_3	1	1	-	5.817237800428169	6.991634062872193	TCTCATTGGCATTGAAA
chr22	44552027	44552028	chr22:44552028:A:G	rs2349628	A	G	G	SOX2_HMG_3	6	1	-	2.3130659744727433	-4.595688804842476	TAGCAATGCCAGGGATC
chr22	44721916	44721917	chr22:44721917:G:C	rs763218	G	C	c	SOX2_HMG_3	9	1	-	1.0549253713347646	-4.577754865828288	GGCCACTTTCAGTGATG
chr22	44728469	44728470	chr22:44728470:C:T	rs743895	C	T	c	SOX2_HMG_3	-20	0	+	0	0	.
chr22	44737357	44737358	chr22:44737358:A:G	rs3329	A	G	G	SOX2_HMG_3	24	0	-	0	0	.
chr22	44737377	44737378	chr22:44737378:T:C	rs78500932	T	C	C	SOX2_HMG_3	4	1	-	1.2168379573348698	-5.6919168219803495	GACCAAGGCCAGTGACG
chr22	44796740	44796741	chr22:44796741:A:G	rs9626245	A	G	a	SOX2_HMG_3	25	0	-	0	0	.
chr22	44796779	44796780	chr22:44796780:G:A	rs1001728	G	A	A	SOX2_HMG_3	-14	0	-	0	0	.
chr22	44832505	44832506	chr22:44832506:A:G	rs10433321	A	G	G	SOX2_HMG_3	-19	0	+	0	0	.
chr22	44838858	44838859	chr22:44838859:A:G	rs4823393	A	G	G	SOX2_HMG_3	22	0	-	0	0	.
chr22	44838874	44838875	chr22:44838875:A:G	rs4823261	A	G	a	SOX2_HMG_3	6	1	-	1.5320077712443074	-5.376747008070913	AGCCAATGGCACTGACG
chr22	44877172	44877173	chr22:44877173:C:T	rs113832116	C	T	C	SOX2_HMG_3	-17	0	+	0	0	.
chr22	45010509	45010510	chr22:45010510:A:G	rs1997890	A	G	A	SOX2_HMG_3	9	1	-	3.2813964293199445	2.4747262953828972	GATCAATTTTCTTGCTG
chr22	45041210	45041211	chr22:45041211:G:T	rs132045	G	T	t	SOX2_HMG_3	20	0	-	0	0	.
chr22	45158925	45158926	chr22:45158926:T:C	rs866223223	T	C	T	SOX2_HMG_3	12	1	+	4.890662703152817	-2.0180920761624033	GCTCAATATTAGTGGCG
chr22	45158928	45158929	chr22:45158929:C:T	rs73432244	C	T	C	SOX2_HMG_3	15	1	+	4.890662703152817	7.733371859329676	GCTCAATATTAGTGGCG
chr22	45158931	45158932	chr22:45158932:T:G	chr22:45158932:T:G	T	G	T	SOX2_HMG_3	18	0	+	0	0	.
chr22	45158949	45158950	chr22:45158950:C:T	rs12483927	C	T	C	SOX2_HMG_3	36	0	+	0	0	.
chr22	45469749	45469750	chr22:45469750:T:A	rs2072771	T	A	T	SOX2_HMG_3	-15	0	-	0	0	.
chr22	45483517	45483518	chr22:45483518:G:C	rs738221	G	C	C	SOX2_HMG_3	11	1	+	2.7504687764660902	-2.5251427525463077	GAACAATTGTTGTGAGA
chr22	45513536	45513537	chr22:45513537:T:C	rs6007073	T	C	C	SOX2_HMG_3	-2	0	+	0	0	.
chr22	45540291	45540292	chr22:45540292:G:T	rs136754	G	T	G	SOX2_HMG_3	19	0	+	0	0	.
chr22	45572583	45572584	chr22:45572584:G:C	rs138824187	G	C	G	SOX2_HMG_3	-13	0	+	0	0	.
chr22	45572607	45572608	chr22:45572608:G:A	rs4393839	G	A	A	SOX2_HMG_3	11	1	+	7.2897856927868165	2.0141741637744186	AATAAATGGAAGTGAAG
chr22	45717830	45717831	chr22:45717831:G:C	rs138155	G	C	C	SOX2_HMG_3	11	1	+	4.09265855871101	-1.1829529703013886	AATTAATAATAGTGTTG
chr22	45778176	45778177	chr22:45778177:C:T	rs135991	C	T	C	SOX2_HMG_3	36	0	-	0	0	.
chr22	45864135	45864136	chr22:45864136:C:T	chr22:45864136:C:T	C	T	C	SOX2_HMG_3	24	0	-	0	0	.
chr22	45864138	45864139	chr22:45864139:G:A	rs188055281	G	A	G	SOX2_HMG_3	21	0	-	0	0	.
chr22	45880687	45880688	chr22:45880688:C:G	rs79491787	C	G	C	SOX2_HMG_3	9	1	-	5.360993069570119	10.993673306733173	AATCAATGGGATCGATG
chr22	45993929	45993930	chr22:45993930:G:A	rs28394489	G	A	a	SOX2_HMG_3	1	1	+	3.1731554986546144	5.004803088733905	TGACAATGATGGTGATG
chr22	45993963	45993964	chr22:45993964:A:G	rs866546368	A	G	a	SOX2_HMG_3	35	0	+	0	0	.
chr22	45995814	45995815	chr22:45995815:C:T	rs28419158	C	T	C	SOX2_HMG_3	23	0	+	0	0	.
chr22	46084369	46084370	chr22:46084370:A:G	rs73456704	A	G	A	SOX2_HMG_3	29	0	-	0	0	.
chr22	46625305	46625306	chr22:46625306:T:G	rs138481	T	G	T	SOX2_HMG_3	10	1	-	1.3253423987973196	-5.583412380517901	ACTCATTAACAGTGAGG
chr22	46625328	46625329	chr22:46625329:A:G	rs9615396	A	G	A	SOX2_HMG_3	-13	0	-	0	0	.
chr22	46929296	46929297	chr22:46929297:G:A	rs2064165	G	A	G	SOX2_HMG_3	-7	0	+	0	0	.
chr22	46932687	46932688	chr22:46932688:A:G	rs9616163	A	G	A	SOX2_HMG_3	31	0	+	0	0	.
chr22	46955001	46955002	chr22:46955002:G:A	rs73186520	G	A	G	SOX2_HMG_3	26	0	+	0	0	.
chr22	47030575	47030576	chr22:47030576:C:T	rs138586583	C	T	C	SOX2_HMG_3	7	1	-	3.5257750909632537	0.7969879704019187	AGGCAACGTTATTGTTG
chr22	47164613	47164614	chr22:47164614:C:T	rs186157435	C	T	C	SOX2_HMG_3	15	1	+	1.373128682948711	4.2158378391255695	GCTGAATGTCAGTGTCG
chr22	47615352	47615353	chr22:47615353:A:C	rs6008308	A	C	C	SOX2_HMG_3	6	1	-	1.7253571818440587	-5.183397597471162	GCTCAATTCAAGGGAAG
chr22	47808201	47808202	chr22:47808202:G:A	rs147948139	G	A	G	SOX2_HMG_3	-9	0	-	0	0	.
chr22	47892018	47892019	chr22:47892019:A:T	rs9615660	A	T	G	SOX2_HMG_3	-2	0	+	0	0	.
chr22	47963190	47963191	chr22:47963191:A:G	rs6007768	A	G	G	SOX2_HMG_3	-20	0	+	0	0	.
chr22	48153774	48153775	chr22:48153775:C:G	rs17704930	C	G	C	SOX2_HMG_3	13	1	-	2.9888149816787055	-3.919939797636515	AATCAATCTAAGTGGGG
chr22	48272221	48272222	chr22:48272222:A:G	rs133590	A	G	G	SOX2_HMG_3	5	1	+	5.684391045995039	-1.2243637333201813	ACACAATGCTATTGGAG
chr22	48275289	48275290	chr22:48275290:A:G	rs6007822	A	G	A	SOX2_HMG_3	-4	0	+	0	0	.
chr22	48275322	48275323	chr22:48275323:T:C	rs9615304	T	C	T	SOX2_HMG_3	29	0	+	0	0	.
chr22	48313753	48313754	chr22:48313754:G:A	rs2879244	G	A	G	SOX2_HMG_3	-11	0	+	0	0	.
chr22	48380059	48380060	chr22:48380060:A:G	rs130767	A	G	G	SOX2_HMG_3	18	0	+	0	0	.
chr22	48415004	48415005	chr22:48415005:C:T	rs73171414	C	T	C	SOX2_HMG_3	0	1	+	1.0876614944571374	0.950332516408473	CATCAAGGTTGGTGATC
chr22	48478497	48478498	chr22:48478498:C:T	rs13056230	C	T	C	SOX2_HMG_3	36	0	+	0	0	.
chr22	48502068	48502069	chr22:48502069:G:A	rs6008741	G	A	G	SOX2_HMG_3	-19	0	-	0	0	.
chr22	48607000	48607001	chr22:48607001:C:T	rs28533693	C	T	C	SOX2_HMG_3	-7	0	-	0	0	.
chr22	48607008	48607009	chr22:48607009:A:C	rs28410043	A	C	C	SOX2_HMG_3	-15	0	-	0	0	.
chr22	48670947	48670948	chr22:48670948:G:A	rs12484312	G	A	G	SOX2_HMG_3	22	0	-	0	0	.
chr22	48705150	48705151	chr22:48705151:G:C	rs12159111	G	C	C	SOX2_HMG_3	17	0	-	0	0	.
chr22	48732210	48732211	chr22:48732211:G:T	rs6010502	G	T	G	SOX2_HMG_3	-18	0	+	0	0	.
chr22	48829327	48829328	chr22:48829328:A:G	rs7288714	A	G	G	SOX2_HMG_3	-8	0	-	0	0	.
chr22	48921549	48921550	chr22:48921550:A:C	chr22:48921550:A:C	A	C	A	SOX2_HMG_3	-20	0	+	0	0	.
chr22	49026260	49026261	chr22:49026261:G:A	rs5769384	G	A	A	SOX2_HMG_3	11	1	+	3.6712578862722642	-1.6043536427401348	CTTCAATAAAAGTGTGA
chr22	49026262	49026263	chr22:49026263:G:A	rs5769385	G	A	A	SOX2_HMG_3	13	1	+	3.6712578862722642	-3.237496893042957	CTTCAATAAAAGTGTGA
chr22	49031122	49031123	chr22:49031123:A:G	rs9616222	A	G	G	SOX2_HMG_3	35	0	-	0	0	.
chr22	49140664	49140665	chr22:49140665:G:A	rs5769932	G	A	G	SOX2_HMG_3	33	0	+	0	0	.
chr22	49321419	49321420	chr22:49321420:A:T	rs848769	A	T	T	SOX2_HMG_3	11	1	-	4.612549362028037	-2.0801421362043095	GTTCAATTATCTTGAAA
chr22	49337270	49337271	chr22:49337271:G:A	rs5769568	G	A	g	SOX2_HMG_3	-13	0	+	0	0	.
chr22	49337291	49337292	chr22:49337292:A:G	rs11702899	A	G	a	SOX2_HMG_3	8	1	+	6.4924652358028645	7.341509183166494	GGTGAATTATATTGATT
chr22	49337313	49337314	chr22:49337314:C:G	rs848740	C	G	c	SOX2_HMG_3	30	0	+	0	0	.
chr22	49357189	49357190	chr22:49357190:G:A	rs9306530	G	A	g	SOX2_HMG_3	13	1	+	1.6409100636585523	-5.2678447156566675	GAGCAATGGAATCGTGA
chr22	49760605	49760606	chr22:49760606:A:G	rs114110755	A	G	a	SOX2_HMG_3	18	0	-	0	0	.
chr22	49765423	49765424	chr22:49765424:A:G	rs138809	A	G	a	SOX2_HMG_3	5	1	+	5.536415370112707	-1.3723394092025136	TATCCATGTCAGTGTTT
chr22	49774003	49774004	chr22:49774004:T:C	rs4468	T	C	C	SOX2_HMG_3	31	0	+	0	0	.
chr22	49799688	49799689	chr22:49799689:T:C	rs138850	T	C	C	SOX2_HMG_3	1	1	-	3.373088527172655	1.5414409370933637	TATCAATGGAAATGGGA
chr22	49897954	49897955	chr22:49897955:G:A	rs73443931	G	A	G	SOX2_HMG_3	18	0	-	0	0	.
chr22	50082700	50082701	chr22:50082701:A:G	rs2235352	A	G	G	SOX2_HMG_3	6	1	-	3.01636573352273	-3.8923890457924912	GGGCAATGAGAGTGAAA
chr22	50289352	50289353	chr22:50289353:G:A	rs62241207	G	A	G	SOX2_HMG_3	1	1	+	6.696489459369956	8.52813704944925	CGTGAATGGCATTGAGA
chr22	50289362	50289363	chr22:50289363:T:C	rs28573806	T	C	C	SOX2_HMG_3	11	1	+	6.696489459369956	0.003797961137608774	CGTGAATGGCATTGAGA
chr22	50289364	50289365	chr22:50289365:G:A	rs145322724	G	A	G	SOX2_HMG_3	13	1	+	6.696489459369956	-0.21226531994526454	CGTGAATGGCATTGAGA
chr22	50542784	50542785	chr22:50542785:C:T	rs5770772	C	T	T	SOX2_HMG_3	-8	0	+	0	0	.
chr22	50622770	50622771	chr22:50622771:G:T	rs11704557	G	T	G	SOX2_HMG_3	-13	0	-	0	0	.
chr3	292823	292824	chr3:292824:T:C	rs11715973	T	C	T	SOX2_HMG_3	26	0	-	0	0	.
chr3	399869	399870	chr3:399870:A:T	rs2387188	A	T	A	SOX2_HMG_3	4	1	+	4.1001699275062276	-2.8085848518089933	GGTCAATTTTGTTGGTG
chr3	663609	663610	chr3:663610:T:G	rs2627977	T	G	T	SOX2_HMG_3	-9	0	-	0	0	.
chr3	1087511	1087512	chr3:1087512:G:C	rs73103453	G	C	G	SOX2_HMG_3	-10	0	+	0	0	.
chr3	1190539	1190540	chr3:1190540:T:A	rs2130279	T	A	A	SOX2_HMG_3	-4	0	+	0	0	.
chr3	1249677	1249678	chr3:1249678:T:A	rs17036386	T	A	T	SOX2_HMG_3	-12	0	+	0	0	.
chr3	1270057	1270058	chr3:1270058:A:G	rs7621594	A	G	G	SOX2_HMG_3	8	1	-	6.3643311143526144	5.4925947617167505	GCACAATGTTATTGTCA
chr3	1531464	1531465	chr3:1531465:C:G	rs73001650	C	G	G	SOX2_HMG_3	13	1	-	2.2897981202006323	-4.618956659114589	GGTCAAGGCCATTGTCT
chr3	1907909	1907910	chr3:1907910:T:G	rs9821217	T	G	G	SOX2_HMG_3	12	1	+	5.427134193093179	-1.481620586222041	ATTAAATGGAATTGAAA
chr3	1962757	1962758	chr3:1962758:T:G	rs2129995	T	G	T	SOX2_HMG_3	25	0	+	0	0	.
chr3	1962760	1962761	chr3:1962761:C:T	rs2129994	C	T	T	SOX2_HMG_3	28	0	+	0	0	.
chr3	2166770	2166771	chr3:2166771:C:G	rs114657873	C	G	C	SOX2_HMG_3	-5	0	+	0	0	.
chr3	2166808	2166809	chr3:2166809:A:G	rs62246968	A	G	A	SOX2_HMG_3	33	0	+	0	0	.
chr3	2207227	2207228	chr3:2207228:T:C	rs1153540	T	C	T	SOX2_HMG_3	5	1	-	7.266713261232649	0.3579584819174291	TTTCAATATTATTGTGT
chr3	2947957	2947958	chr3:2947958:T:C	rs876255	T	C	C	SOX2_HMG_3	-17	0	+	0	0	.
chr3	2992671	2992672	chr3:2992672:A:C	rs973593	A	C	A	SOX2_HMG_3	24	0	-	0	0	.
chr3	2992689	2992690	chr3:2992690:A:G	rs973594	A	G	A	SOX2_HMG_3	6	1	-	6.456504740836433	-0.45225003847878853	AATCAATAGGAGTGAGG
chr3	3357625	3357626	chr3:3357626:A:C	rs1396429	A	C	C	SOX2_HMG_3	-11	0	+	0	0	.
chr3	3359654	3359655	chr3:3359655:A:G	rs6782604	A	G	A	SOX2_HMG_3	-4	0	-	0	0	.
chr3	3420712	3420713	chr3:3420713:C:A	rs149323435	C	A	C	SOX2_HMG_3	20	0	+	0	0	.
chr3	3456689	3456690	chr3:3456690:A:G	rs6789588	A	G	G	SOX2_HMG_3	8	1	+	3.2394742722151784	4.088518219578806	AATCTATGATTTTGATT
chr3	3503731	3503732	chr3:3503732:C:T	rs10212196	C	T	C	SOX2_HMG_3	13	1	-	2.7795836050186082	-4.129171174296611	CATCAAAGTTACTGAGA
chr3	3655188	3655189	chr3:3655189:T:C	rs9873276	T	C	T	SOX2_HMG_3	5	1	-	6.452851564000442	-0.45590321531477845	AGTAAATGGTATTGTTT
chr3	3778832	3778833	chr3:3778833:C:T	rs6442831	C	T	C	SOX2_HMG_3	-14	0	+	0	0	.
chr3	4198162	4198163	chr3:4198163:C:T	rs1444058	C	T	T	SOX2_HMG_3	1	1	+	5.335647048273184	5.335647048273184	ACTCATTGGCAGTGAAG
chr3	4322865	4322866	chr3:4322866:T:A	rs74927171	T	A	C	SOX2_HMG_3	-8	0	-	0	0	.
chr3	4340972	4340973	chr3:4340973:T:C	rs62259857	T	C	T	SOX2_HMG_3	5	1	-	4.741407519704623	-2.167347259610597	AGTCAATGTTTGTGTAG
chr3	4340990	4340991	chr3:4340991:A:T	rs9847079	A	T	A	SOX2_HMG_3	-13	0	-	0	0	.
chr3	4507283	4507284	chr3:4507284:A:G	rs114506187	A	G	A	SOX2_HMG_3	10	1	+	5.658840114912981	-1.2499146644022405	CCCCAATGTTATTGTGA
chr3	4582773	4582774	chr3:4582774:G:T	rs7642352	G	T	G	SOX2_HMG_3	-1	0	+	0	0	.
chr3	4767018	4767019	chr3:4767019:G:A	rs2291863	G	A	G	SOX2_HMG_3	31	0	+	0	0	.
chr3	4827905	4827906	chr3:4827906:A:G	rs3805025	A	G	A	SOX2_HMG_3	5	1	+	4.2435707532574956	-2.6651840260577253	AGTCAATAACAGTGCTG
chr3	4867622	4867623	chr3:4867623:G:C	rs28698158	G	C	G	SOX2_HMG_3	-20	0	+	0	0	.
chr3	4959462	4959463	chr3:4959463:G:C	rs34892180	G	C	G	SOX2_HMG_3	8	1	-	5.571221858212509	6.305490290983709	CATCGATTCTAGTGAAA
chr3	5248764	5248765	chr3:5248765:T:C	rs466718	T	C	T	SOX2_HMG_3	5	1	-	4.891510689131236	-2.017244090183983	AATCAATTCTAGTTTTG
chr3	6066857	6066858	chr3:6066858:T:C	rs57465575	T	C	T	SOX2_HMG_3	22	0	+	0	0	.
chr3	6080613	6080614	chr3:6080614:A:G	rs1156715284	A	G	A	SOX2_HMG_3	-2	0	+	0	0	.
chr3	6098983	6098984	chr3:6098984:G:A	rs9821638	G	A	G	SOX2_HMG_3	20	0	+	0	0	.
chr3	6133127	6133128	chr3:6133128:C:T	rs9311801	C	T	C	SOX2_HMG_3	24	0	-	0	0	.
chr3	6173604	6173605	chr3:6173605:C:T	rs7636014	C	T	C	SOX2_HMG_3	25	0	+	0	0	.
chr3	6431664	6431665	chr3:6431665:A:C	rs156815	A	C	C	SOX2_HMG_3	14	1	+	3.3169441777556243	-3.5153545278110685	ATGGAATGGCATTGATT
chr3	6642796	6642797	chr3:6642797:A:T	rs191605	A	T	A	SOX2_HMG_3	-7	0	-	0	0	.
chr3	7190172	7190173	chr3:7190173:A:T	rs13326811	A	T	T	SOX2_HMG_3	0	1	-	3.044777477544989	3.706579078219683	TGTCAATGGATGTGTTA
chr3	7475602	7475603	chr3:7475603:T:C	rs1391902	T	C	T	SOX2_HMG_3	11	1	+	6.595229686624994	-0.09746181160735379	CGTCACTGTTATTGTTA
chr3	7700724	7700725	chr3:7700725:G:A	rs3828422	G	A	G	SOX2_HMG_3	8	1	+	2.7969227533962506	1.9478788060326218	GATGAAAGGCATTGAAA
chr3	7798945	7798946	chr3:7798946:C:T	rs1488474	C	T	C	SOX2_HMG_3	-1	0	-	0	0	.
chr3	7871104	7871105	chr3:7871105:C:G	rs17741320	C	G	G	SOX2_HMG_3	34	0	+	0	0	.
chr3	7897867	7897868	chr3:7897868:C:T	rs36084967	C	T	C	SOX2_HMG_3	13	1	-	6.598048342225983	-0.31070643708923806	CAGCAATGTGAGTGATG
chr3	7960982	7960983	chr3:7960983:G:A	rs12485725	G	A	G	SOX2_HMG_3	29	0	+	0	0	.
chr3	8311642	8311643	chr3:8311643:C:A	chr3:8311643:C:A	C	A	C	SOX2_HMG_3	-20	0	+	0	0	.
chr3	8504415	8504416	chr3:8504416:G:A	rs9312023	G	A	G	SOX2_HMG_3	-14	0	-	0	0	.
chr3	8507198	8507199	chr3:8507199:T:C	rs931686	T	C	C	SOX2_HMG_3	26	0	-	0	0	.
chr3	8573802	8573803	chr3:8573803:A:G	rs15734	A	G	G	SOX2_HMG_3	-8	0	+	0	0	.
chr3	8900752	8900753	chr3:8900753:C:G	rs250411	C	G	C	SOX2_HMG_3	-20	0	-	0	0	.
chr3	8900921	8900922	chr3:8900922:G:T	rs373090	G	T	G	SOX2_HMG_3	21	0	+	0	0	.
chr3	8937344	8937345	chr3:8937345:C:T	rs78587561	C	T	C	SOX2_HMG_3	-14	0	-	0	0	.
chr3	8937445	8937446	chr3:8937446:G:A	rs181922716	G	A	G	SOX2_HMG_3	-20	0	-	0	0	.
chr3	8962742	8962743	chr3:8962743:C:T	rs618784	C	T	T	SOX2_HMG_3	30	0	+	0	0	.
chr3	8963065	8963066	chr3:8963066:C:T	rs45585931	C	T	C	SOX2_HMG_3	3	1	+	5.557192062522578	-1.351562716792644	TCTCCATGTTATTGTTG
chr3	8999508	8999509	chr3:8999509:T:C	rs62245082	T	C	T	SOX2_HMG_3	20	0	-	0	0	.
chr3	9214628	9214629	chr3:9214629:T:C	rs391466	T	C	T	SOX2_HMG_3	-3	0	-	0	0	.
chr3	9703358	9703359	chr3:9703359:C:T	rs7618350	C	T	T	SOX2_HMG_3	22	0	+	0	0	.
chr3	10279832	10279833	chr3:10279833:G:A	rs10285	G	A	G	SOX2_HMG_3	-7	0	-	0	0	.
chr3	10551460	10551461	chr3:10551461:C:T	rs553352558	C	T	C	SOX2_HMG_3	33	0	+	0	0	.
chr3	10553407	10553408	chr3:10553408:T:C	rs1009398193	T	C	T	SOX2_HMG_3	-10	0	+	0	0	.
chr3	10570949	10570950	chr3:10570950:G:C	rs35944049	G	C	G	SOX2_HMG_3	-3	0	-	0	0	.
chr3	10833432	10833433	chr3:10833433:G:A	rs1905756	G	A	G	SOX2_HMG_3	7	1	+	8.317852282115995	5.589065161554657	CATCAATGCCAGGGATG
chr3	10925025	10925026	chr3:10925026:T:C	rs2581215	T	C	T	SOX2_HMG_3	11	1	+	4.029442759311912	-2.663248738920436	AAAAAATTGAATTGATG
chr3	10968254	10968255	chr3:10968255:G:A	rs546706123	G	A	g	SOX2_HMG_3	36	0	-	0	0	.
chr3	11050199	11050200	chr3:11050200:G:T	rs3856788	G	T	G	SOX2_HMG_3	25	0	+	0	0	.
chr3	11567839	11567840	chr3:11567840:A:G	rs2447602	A	G	A	SOX2_HMG_3	10	1	+	6.941735486710642	0.03298070739542158	ATACAATTTTATTGTTA
chr3	11580837	11580838	chr3:11580838:G:A	rs17608993	G	A	G	SOX2_HMG_3	-1	0	+	0	0	.
chr3	11588777	11588778	chr3:11588778:G:T	rs12633841	G	T	G	SOX2_HMG_3	-18	0	+	0	0	.
chr3	11600190	11600191	chr3:11600191:A:C	rs73025163	A	C	A	SOX2_HMG_3	-2	0	+	0	0	.
chr3	11703424	11703425	chr3:11703425:C:G	rs36068197	C	G	C	SOX2_HMG_3	11	1	-	6.852746996300924	1.5771354672885254	CCTCACTGGTAGTGATG
chr3	11944166	11944167	chr3:11944167:C:G	rs12629709	C	G	C	SOX2_HMG_3	26	0	-	0	0	.
chr3	12197091	12197092	chr3:12197092:A:G	rs1033426885	A	G	A	SOX2_HMG_3	2	1	-	2.9812897234621794	-2.0220823468534066	TATCATTACCAGTGAGT
chr3	12489921	12489922	chr3:12489922:G:A	rs12495784	G	A	G	SOX2_HMG_3	-16	0	+	0	0	.
chr3	12513993	12513994	chr3:12513994:C:T	rs116103198	C	T	C	SOX2_HMG_3	7	1	-	4.150771620426752	1.4219844998654174	GTTCAATGCTTGTGTTG
chr3	12973493	12973494	chr3:12973494:T:C	rs12492009	T	C	C	SOX2_HMG_3	30	0	-	0	0	.
chr3	13277159	13277160	chr3:13277160:C:T	rs630814	C	T	C	SOX2_HMG_3	-14	0	+	0	0	.
chr3	13277203	13277204	chr3:13277204:A:C	rs191561006	A	C	A	SOX2_HMG_3	30	0	+	0	0	.
chr3	13308047	13308048	chr3:13308048:T:C	rs477780	T	C	C	SOX2_HMG_3	-5	0	+	0	0	.
chr3	13546626	13546627	chr3:13546627:T:C	rs55639070	T	C	C	SOX2_HMG_3	11	1	+	3.607080796617039	-3.0856107016153094	AATCAAAGCCATTGGGT
chr3	13746143	13746144	chr3:13746144:A:G	rs2974389	A	G	A	SOX2_HMG_3	-10	0	-	0	0	.
chr3	13754179	13754180	chr3:13754180:T:C	rs7634577	T	C	T	SOX2_HMG_3	2	1	+	5.446700200662766	0.44332813034717544	CATCAATGGTATTTTCA
chr3	13767075	13767076	chr3:13767076:G:C	rs75325065	G	C	G	SOX2_HMG_3	-11	0	+	0	0	.
chr3	13816471	13816472	chr3:13816472:T:C	rs1124480	T	C	T	SOX2_HMG_3	16	1	-	3.6323731780814885	3.90606079447176	GTTCAATGATAGTTACA
chr3	13857120	13857121	chr3:13857121:C:T	rs9819887	C	T	C	SOX2_HMG_3	18	0	-	0	0	.
chr3	13929997	13929998	chr3:13929998:C:T	rs6776735	C	T	C	SOX2_HMG_3	27	0	-	0	0	.
chr3	14017279	14017280	chr3:14017280:C:T	rs80026241	C	T	C	SOX2_HMG_3	33	0	-	0	0	.
chr3	14017326	14017327	chr3:14017327:A:G	rs543608379	A	G	A	SOX2_HMG_3	-14	0	-	0	0	.
chr3	14201031	14201032	chr3:14201032:T:A	rs73815319	T	A	T	SOX2_HMG_3	15	1	+	4.7749465183516495	3.5400440816349277	GAGAAATGTTATTGTTT
chr3	14223546	14223547	chr3:14223547:A:G	rs4685086	A	G	A	SOX2_HMG_3	11	1	-	4.20263318539323	-2.4900583128391167	AATCAACTTTATTGGAA
chr3	14330858	14330859	chr3:14330859:C:T	rs9840551	C	T	C	SOX2_HMG_3	-4	0	+	0	0	.
chr3	14330862	14330863	chr3:14330863:C:T	rs73817745	C	T	C	SOX2_HMG_3	0	1	+	1.6655282047710602	1.5281992267223958	CATCCATGCCAGTGGGT
chr3	14397135	14397136	chr3:14397136:T:C	rs6442452	T	C	c	SOX2_HMG_3	-19	0	-	0	0	.
chr3	14464405	14464406	chr3:14464406:C:A	rs6808613	C	A	A	SOX2_HMG_3	36	0	+	0	0	.
chr3	14787773	14787774	chr3:14787774:T:C	rs13080265	T	C	T	SOX2_HMG_3	17	0	-	0	0	.
chr3	14948871	14948872	chr3:14948872:G:T	rs4093173	G	T	G	SOX2_HMG_3	26	0	+	0	0	.
chr3	14948877	14948878	chr3:14948878:G:A	rs75343838	G	A	G	SOX2_HMG_3	32	0	+	0	0	.
chr3	15361022	15361023	chr3:15361023:G:A	rs73816889	G	A	G	SOX2_HMG_3	7	1	-	4.364399993149079	9.052531699851519	AATCAATCCCAGTGTGA
chr3	15519207	15519208	chr3:15519208:T:C	rs114071457	T	C	T	SOX2_HMG_3	31	0	+	0	0	.
chr3	15602687	15602688	chr3:15602688:G:A	rs73030389	G	A	G	SOX2_HMG_3	2	1	+	3.1484832417185045	3.1484832417185045	AAGCACTGGAAGTGAAA
chr3	15708836	15708837	chr3:15708837:A:C	rs2470514	A	C	A	SOX2_HMG_3	24	0	-	0	0	.
chr3	15753059	15753060	chr3:15753060:T:C	rs111699587	T	C	T	SOX2_HMG_3	-16	0	+	0	0	.
chr3	16055350	16055351	chr3:16055351:A:C	rs1869626	A	C	C	SOX2_HMG_3	16	1	+	4.287310955835211	2.5611560773089384	AATCAATAGAAGAGAAA
chr3	16227466	16227467	chr3:16227467:T:A	rs15767	T	A	A	SOX2_HMG_3	-9	0	+	0	0	.
chr3	16227478	16227479	chr3:16227479:C:A	rs14576	C	A	C	SOX2_HMG_3	3	1	+	4.3779145076690895	-2.5308402716461305	GATCAATGCTGTGGATG
chr3	16271056	16271057	chr3:16271057:C:T	rs842259	C	T	C	SOX2_HMG_3	-18	0	-	0	0	.
chr3	16463049	16463050	chr3:16463050:C:T	rs17042294	C	T	T	SOX2_HMG_3	-18	0	+	0	0	.
chr3	16633619	16633620	chr3:16633620:A:C	rs7647846	A	C	A	SOX2_HMG_3	35	0	+	0	0	.
chr3	16740104	16740105	chr3:16740105:G:C	rs9817635	G	C	C	SOX2_HMG_3	-5	0	+	0	0	.
chr3	16759644	16759645	chr3:16759645:G:A	rs116583336	G	A	g	SOX2_HMG_3	11	1	+	4.673845447598492	-0.601766081413907	TTTCAATGGCAGAGAAG
chr3	16941280	16941281	chr3:16941281:A:T	rs78222630	A	T	A	SOX2_HMG_3	12	1	-	3.6086170067615235	-3.300137772553696	CAACAGTGGAATTGAGA
chr3	17193997	17193998	chr3:17193998:G:A	rs2596656	G	A	A	SOX2_HMG_3	28	0	+	0	0	.
chr3	17196059	17196060	chr3:17196060:T:A	rs1030897450	T	A	T	SOX2_HMG_3	1	1	-	2.489944210316173	-0.5160996422071422	AATGAATGCTGTTGAGG
chr3	17233587	17233588	chr3:17233588:T:C	rs113993660	T	C	T	SOX2_HMG_3	32	0	+	0	0	.
chr3	17353122	17353123	chr3:17353123:A:G	rs1374197	A	G	G	SOX2_HMG_3	5	1	+	4.027294192110552	-2.8814605872046686	AATCCATGGCACTGATA
chr3	17707684	17707685	chr3:17707685:C:T	rs4566567	C	T	T	SOX2_HMG_3	3	1	+	5.722681540641032	-1.1860732386741892	GGTCAATGCCAGTCAAA
chr3	17850416	17850417	chr3:17850417:T:G	rs76890050	T	G	T	SOX2_HMG_3	-17	0	+	0	0	.
chr3	17908534	17908535	chr3:17908535:C:T	rs12492931	C	T	T	SOX2_HMG_3	16	1	-	3.4738812707863316	3.2001936543960605	AACAAATGACATTGAGG
chr3	18778328	18778329	chr3:18778329:C:G	rs7428366	C	G	G	SOX2_HMG_3	8	1	-	4.1639964358483486	3.429728003077148	AACCAATTGAAGTGTAA
chr3	18778340	18778341	chr3:18778341:A:C	rs7429165	A	C	A	SOX2_HMG_3	-4	0	-	0	0	.
chr3	18946625	18946626	chr3:18946626:A:T	rs114123001	A	T	A	SOX2_HMG_3	-18	0	-	0	0	.
chr3	19757797	19757798	chr3:19757798:T:G	rs4858093	T	G	T	SOX2_HMG_3	26	0	-	0	0	.
chr3	20073043	20073044	chr3:20073044:T:C	rs6803231	T	C	C	SOX2_HMG_3	28	0	+	0	0	.
chr3	20752682	20752683	chr3:20752683:A:G	rs904824	A	G	A	SOX2_HMG_3	8	1	-	3.8706102182514646	2.9988738656156007	AATCCATGTTATTGCAG
chr3	20838538	20838539	chr3:20838539:A:G	rs1499003	A	G	A	SOX2_HMG_3	12	1	-	4.416610543234215	-2.492144236081005	ATTCTATTTTATTGAGT
chr3	21414677	21414678	chr3:21414678:C:T	rs376703	C	T	C	SOX2_HMG_3	-4	0	+	0	0	.
chr3	21414693	21414694	chr3:21414694:T:C	rs7637427	T	C	T	SOX2_HMG_3	12	1	+	2.4602005345036186	-4.448554244811602	GATGATTGGTAGTGAAG
chr3	21421387	21421388	chr3:21421388:A:G	rs4455340	A	G	A	SOX2_HMG_3	-18	0	+	0	0	.
chr3	21477907	21477908	chr3:21477908:A:G	rs7644446	A	G	G	SOX2_HMG_3	-10	0	+	0	0	.
chr3	21509996	21509997	chr3:21509997:C:T	rs9862072	C	T	T	SOX2_HMG_3	22	0	-	0	0	.
chr3	21747872	21747873	chr3:21747873:G:A	rs78626711	G	A	G	SOX2_HMG_3	34	0	-	0	0	.
chr3	21920690	21920691	chr3:21920691:G:A	rs8180049	G	A	G	SOX2_HMG_3	-10	0	+	0	0	.
chr3	21920715	21920716	chr3:21920716:T:C	rs8180026	T	C	T	SOX2_HMG_3	15	1	+	5.518801307947525	2.6760921517706664	AGTAAATATAATTGATG
chr3	21920732	21920733	chr3:21920733:C:T	rs185404850	C	T	C	SOX2_HMG_3	32	0	+	0	0	.
chr3	21944854	21944855	chr3:21944855:A:G	rs549089	A	G	A	SOX2_HMG_3	36	0	+	0	0	.
chr3	21954536	21954537	chr3:21954537:G:T	rs1486397	G	T	T	SOX2_HMG_3	34	0	+	0	0	.
chr3	21959140	21959141	chr3:21959141:A:G	rs3821387	A	G	A	SOX2_HMG_3	-20	0	-	0	0	.
chr3	21995251	21995252	chr3:21995252:G:C	rs1497928	G	C	G	SOX2_HMG_3	27	0	+	0	0	.
chr3	22159547	22159548	chr3:22159548:G:C	rs141551913	G	C	G	SOX2_HMG_3	25	0	-	0	0	.
chr3	22229438	22229439	chr3:22229439:C:T	rs1025162940	C	T	C	SOX2_HMG_3	-19	0	+	0	0	.
chr3	22229691	22229692	chr3:22229692:C:G	rs114756562	C	G	C	SOX2_HMG_3	28	0	+	0	0	.
chr3	22424242	22424243	chr3:22424243:T:A	rs11129063	T	A	T	SOX2_HMG_3	16	1	-	4.577461775654462	4.048078950268543	TATCAATTTTATTCTGA
chr3	22527455	22527456	chr3:22527456:C:T	rs11921319	C	T	C	SOX2_HMG_3	35	0	-	0	0	.
chr3	22562567	22562568	chr3:22562568:C:T	rs4858416	C	T	C	SOX2_HMG_3	-10	0	-	0	0	.
chr3	22562572	22562573	chr3:22562573:C:G	rs6765561	C	G	C	SOX2_HMG_3	-15	0	-	0	0	.
chr3	23055994	23055995	chr3:23055995:A:T	rs843989	A	T	A	SOX2_HMG_3	-13	0	+	0	0	.
chr3	23389666	23389667	chr3:23389667:G:A	rs71322181	G	A	A	SOX2_HMG_3	36	0	-	0	0	.
chr3	23543412	23543413	chr3:23543413:G:A	rs9815921	G	A	A	SOX2_HMG_3	-8	0	-	0	0	.
chr3	23654050	23654051	chr3:23654051:G:A	rs6788396	G	A	G	SOX2_HMG_3	-18	0	+	0	0	.
chr3	23654056	23654057	chr3:23654057:C:T	rs6764779	C	T	C	SOX2_HMG_3	-12	0	+	0	0	.
chr3	24213002	24213003	chr3:24213003:C:T	rs941104107	C	T	C	SOX2_HMG_3	-4	0	-	0	0	.
chr3	24416089	24416090	chr3:24416090:C:T	rs1001183730	C	T	C	SOX2_HMG_3	-2	0	+	0	0	.
chr3	24692245	24692246	chr3:24692246:T:C	rs114968910	T	C	T	SOX2_HMG_3	4	1	-	3.069607843710063	-3.8391469356051564	TATCATTAGCAGTGACA
chr3	24713594	24713595	chr3:24713595:A:G	rs115697825	A	G	A	SOX2_HMG_3	5	1	+	4.269680904186394	-2.639073875128825	CCTCAATGAAACTGAAA
chr3	24741817	24741818	chr3:24741818:T:C	rs12715061	T	C	T	SOX2_HMG_3	11	1	+	9.42527581509361	2.732584316861262	GTTCAATGTCATTGTCA
chr3	24741821	24741822	chr3:24741822:C:T	rs73035585	C	T	C	SOX2_HMG_3	15	1	+	9.42527581509361	12.267984971270469	GTTCAATGTCATTGTCA
chr3	24846750	24846751	chr3:24846751:T:C	rs1994909	T	C	C	SOX2_HMG_3	-3	0	+	0	0	.
chr3	24867891	24867892	chr3:24867892:C:T	rs145891807	C	T	C	SOX2_HMG_3	-7	0	-	0	0	.
chr3	24918111	24918112	chr3:24918112:A:G	rs9843036	A	G	G	SOX2_HMG_3	8	1	-	3.6369533254699453	2.7652169728340805	GAACAATGTTATTCTGA
chr3	24918123	24918124	chr3:24918124:G:C	rs73049480	G	C	G	SOX2_HMG_3	-4	0	-	0	0	.
chr3	24940130	24940131	chr3:24940131:A:T	rs7648839	A	T	A	SOX2_HMG_3	22	0	+	0	0	.
chr3	24963312	24963313	chr3:24963313:C:A	rs937267	C	A	A	SOX2_HMG_3	18	0	+	0	0	.
chr3	24995011	24995012	chr3:24995012:C:T	rs115342535	C	T	C	SOX2_HMG_3	-10	0	+	0	0	.
chr3	25458033	25458034	chr3:25458034:G:A	rs112383373	G	A	G	SOX2_HMG_3	6	1	-	3.157802797600106	10.066557576915326	TATCAACGTAAGTGACC
chr3	25458049	25458050	chr3:25458050:G:A	rs74521791	G	A	G	SOX2_HMG_3	-10	0	-	0	0	.
chr3	25461004	25461005	chr3:25461005:C:T	rs74820342	C	T	C	SOX2_HMG_3	-13	0	+	0	0	.
chr3	25507470	25507471	chr3:25507471:C:T	rs1997353	C	T	C	SOX2_HMG_3	28	0	+	0	0	.
chr3	25556440	25556441	chr3:25556441:C:T	rs140817964	C	T	C	SOX2_HMG_3	21	0	+	0	0	.
chr3	26062084	26062085	chr3:26062085:A:G	rs13063917	A	G	A	SOX2_HMG_3	-4	0	-	0	0	.
chr3	27217067	27217068	chr3:27217068:A:T	rs112248999	A	T	A	SOX2_HMG_3	-20	0	+	0	0	.
chr3	27217071	27217072	chr3:27217072:G:T	rs62256307	G	T	G	SOX2_HMG_3	-16	0	+	0	0	.
chr3	28211354	28211355	chr3:28211355:T:A	rs1042391960	T	A	T	SOX2_HMG_3	-9	0	+	0	0	.
chr3	28484856	28484857	chr3:28484857:A:G	rs7652167	A	G	A	SOX2_HMG_3	-13	0	-	0	0	.
chr3	29186777	29186778	chr3:29186778:C:T	rs114993709	C	T	C	SOX2_HMG_3	13	1	-	2.4730464502484715	-4.435708329066748	GCTCAATGTCAGCGGTA
chr3	29229003	29229004	chr3:29229004:G:A	rs17705662	G	A	A	SOX2_HMG_3	36	0	-	0	0	.
chr3	29401994	29401995	chr3:29401995:T:C	rs6549937	T	C	t	SOX2_HMG_3	24	0	+	0	0	.
chr3	29604244	29604245	chr3:29604245:T:C	rs7634557	T	C	T	SOX2_HMG_3	14	1	+	5.075949762517113	0.9564249017647145	TAGCAATATAATTGTGA
chr3	29669846	29669847	chr3:29669847:A:G	rs6785789	A	G	G	SOX2_HMG_3	16	1	-	3.0675397764752748	1.870767723334921	AATCAAAGTTATTGCAT
chr3	30082080	30082081	chr3:30082081:G:A	rs35694561	G	A	g	SOX2_HMG_3	-5	0	-	0	0	.
chr3	30135332	30135333	chr3:30135333:G:A	rs6806181	G	A	G	SOX2_HMG_3	36	0	+	0	0	.
chr3	30231934	30231935	chr3:30231935:C:G	rs74647317	C	G	c	SOX2_HMG_3	19	0	+	0	0	.
chr3	30451858	30451859	chr3:30451859:C:T	rs11129405	C	T	C	SOX2_HMG_3	18	0	-	0	0	.
chr3	30452001	30452002	chr3:30452002:G:C	rs11129406	G	C	C	SOX2_HMG_3	-6	0	-	0	0	.
chr3	30656899	30656900	chr3:30656900:T:C	rs2082225	T	C	C	SOX2_HMG_3	7	1	+	3.8424884637603562	-0.8456432429420813	GAACAACTATAGTGATG
chr3	30886836	30886837	chr3:30886837:G:T	rs55644344	G	T	G	SOX2_HMG_3	1	1	+	3.968818057575885	2.7944217951318597	AGACAATGGAGTTGATA
chr3	31075883	31075884	chr3:31075884:A:G	rs1485925	A	G	G	SOX2_HMG_3	-3	0	-	0	0	.
chr3	31229788	31229789	chr3:31229789:A:G	rs118080146	A	G	A	SOX2_HMG_3	28	0	-	0	0	.
chr3	31407722	31407723	chr3:31407723:T:C	rs73824128	T	C	T	SOX2_HMG_3	-16	0	-	0	0	.
chr3	31421407	31421408	chr3:31421408:T:C	rs12485914	T	C	T	SOX2_HMG_3	35	0	+	0	0	.
chr3	31446197	31446198	chr3:31446198:T:A	rs17027693	T	A	.	SOX2_HMG_3	30	0	-	0	0	.
chr3	31499807	31499808	chr3:31499808:G:A	rs12485487	G	A	G	SOX2_HMG_3	19	0	-	0	0	.
chr3	31684632	31684633	chr3:31684633:C:G	rs17027964	C	G	C	SOX2_HMG_3	26	0	+	0	0	.
chr3	32023114	32023115	chr3:32023115:A:G	rs1597666	A	G	A	SOX2_HMG_3	-16	0	+	0	0	.
chr3	32048920	32048921	chr3:32048921:A:C	rs6778224	A	C	C	SOX2_HMG_3	27	0	+	0	0	.
chr3	32095506	32095507	chr3:32095507:G:A	rs9680948	G	A	A	SOX2_HMG_3	15	1	-	4.167968158485872	7.010677314662731	AGTCATTGCCAGTGACG
chr3	32109382	32109383	chr3:32109383:C:T	rs181098752	C	T	C	SOX2_HMG_3	30	0	+	0	0	.
chr3	32235803	32235804	chr3:32235804:A:G	rs4955267	A	G	G	SOX2_HMG_3	-4	0	-	0	0	.
chr3	32402004	32402005	chr3:32402005:G:A	rs540467166	G	A	G	SOX2_HMG_3	18	0	+	0	0	.
chr3	32403753	32403754	chr3:32403754:A:G	rs3844589	A	G	G	SOX2_HMG_3	2	1	-	3.6290338434278353	-1.3743382268877526	CATCATTTTCAGTGTTT
chr3	32477893	32477894	chr3:32477894:A:G	rs116526530	A	G	A	SOX2_HMG_3	5	1	+	5.868629565819959	-1.0401252134952612	ATTCAATGGTGGTGAAA
chr3	32744035	32744036	chr3:32744036:A:G	rs114049936	A	G	A	SOX2_HMG_3	-11	0	+	0	0	.
chr3	33854149	33854150	chr3:33854150:A:G	rs111745498	A	G	A	SOX2_HMG_3	-6	0	-	0	0	.
chr3	34014540	34014541	chr3:34014541:C:G	rs74737899	C	G	C	SOX2_HMG_3	34	0	+	0	0	.
chr3	34019737	34019738	chr3:34019738:G:A	rs4075756	G	A	A	SOX2_HMG_3	31	0	-	0	0	.
chr3	34189440	34189441	chr3:34189441:C:T	rs11712920	C	T	C	SOX2_HMG_3	29	0	-	0	0	.
chr3	34593511	34593512	chr3:34593512:C:A	rs13082790	C	A	C	SOX2_HMG_3	23	0	+	0	0	.
chr3	35367392	35367393	chr3:35367393:G:A	rs1450312	G	A	A	SOX2_HMG_3	10	1	-	2.599034584778383	2.599034584778383	CCTCAATGCCCGTGTTG
chr3	35685255	35685256	chr3:35685256:A:G	rs3821447	A	G	A	SOX2_HMG_3	6	1	-	3.9541006266047924	-2.954654152710428	CACCAATTGTATGGATA
chr3	35687388	35687389	chr3:35687389:A:G	rs2063648	A	G	G	SOX2_HMG_3	4	1	+	2.702934650311866	-4.205820129003355	ATACAATGGCTGTGATG
chr3	35954975	35954976	chr3:35954976:T:C	rs9816885	T	C	T	SOX2_HMG_3	-14	0	+	0	0	.
chr3	35955380	35955381	chr3:35955381:A:G	rs1488092	A	G	G	SOX2_HMG_3	-16	0	-	0	0	.
chr3	36481455	36481456	chr3:36481456:A:G	rs6795695	A	G	G	SOX2_HMG_3	1	1	+	3.2360356953219687	1.404388105242678	AAGCAATTGTAGAGAAG
chr3	36795909	36795910	chr3:36795910:C:G	rs9849965	C	G	G	SOX2_HMG_3	-7	0	-	0	0	.
chr3	36919168	36919169	chr3:36919169:C:A	rs7622114	C	A	A	SOX2_HMG_3	23	0	+	0	0	.
chr3	37109496	37109497	chr3:37109497:C:G	rs6806252	C	G	G	SOX2_HMG_3	-10	0	-	0	0	.
chr3	37647219	37647220	chr3:37647220:T:C	rs6780578	T	C	T	SOX2_HMG_3	10	1	-	2.471010089659849	-4.437744689655371	GGGCAATGCTATTAACA
chr3	37767985	37767986	chr3:37767986:A:G	rs11712654	A	G	a	SOX2_HMG_3	10	1	+	5.20546042209131	-1.7032943572239105	TGTCATTGCAATTGAAA
chr3	38004531	38004532	chr3:38004532:A:C	rs9843506	A	C	A	SOX2_HMG_3	4	1	+	3.711022301887792	-3.1977324774274276	GAGCAATTGCATTGCGG
chr3	38228337	38228338	chr3:38228338:A:G	rs111369288	A	G	A	SOX2_HMG_3	22	0	+	0	0	.
chr3	38264655	38264656	chr3:38264656:A:C	rs9850046	A	C	A	SOX2_HMG_3	36	0	-	0	0	.
chr3	38460424	38460425	chr3:38460425:G:A	rs2268755	G	A	A	SOX2_HMG_3	-20	0	-	0	0	.
chr3	38984907	38984908	chr3:38984908:C:T	rs34235284	C	T	C	SOX2_HMG_3	-3	0	+	0	0	.
chr3	39108082	39108083	chr3:39108083:C:T	rs28362641	C	T	C	SOX2_HMG_3	31	0	-	0	0	.
chr3	39108104	39108105	chr3:39108105:A:G	rs142798608	A	G	A	SOX2_HMG_3	9	1	-	3.252480936638413	2.445810802701366	GGATAATGATAGTGATT
chr3	39155129	39155130	chr3:39155130:C:T	rs111946296	C	T	C	SOX2_HMG_3	22	0	-	0	0	.
chr3	39216264	39216265	chr3:39216265:A:C	rs17792215	A	C	A	SOX2_HMG_3	-8	0	-	0	0	.
chr3	39343809	39343810	chr3:39343810:A:G	rs74694890	A	G	A	SOX2_HMG_3	-2	0	-	0	0	.
chr3	39927868	39927869	chr3:39927869:G:A	rs9837807	G	A	G	SOX2_HMG_3	-19	0	+	0	0	.
chr3	40146352	40146353	chr3:40146353:T:C	rs73827320	T	C	T	SOX2_HMG_3	2	1	+	4.409081704355127	-0.5942903659604603	GATCAAAGCCAGTGTGA
chr3	40218246	40218247	chr3:40218247:G:A	rs11129869	G	A	G	SOX2_HMG_3	-17	0	+	0	0	.
chr3	41026204	41026205	chr3:41026205:C:T	rs6809212	C	T	T	SOX2_HMG_3	18	0	+	0	0	.
chr3	41098165	41098166	chr3:41098166:C:A	rs60300746	C	A	C	SOX2_HMG_3	7	1	-	2.90361455224013	0.8589040475065945	GTTCAATGACCTTGGTA
chr3	41328962	41328963	chr3:41328963:C:T	rs9814012	C	T	c	SOX2_HMG_3	-16	0	-	0	0	.
chr3	41330012	41330013	chr3:41330013:G:C	rs9819537	G	C	G	SOX2_HMG_3	-19	0	-	0	0	.
chr3	41502627	41502628	chr3:41502628:T:C	rs1795322	T	C	T	SOX2_HMG_3	11	1	+	11.325334494669884	4.632642996437536	GAACAATACTATTGATA
chr3	42348336	42348337	chr3:42348337:A:G	rs2240863	A	G	G	SOX2_HMG_3	-17	0	+	0	0	.
chr3	42518949	42518950	chr3:42518950:G:A	rs450812	G	A	A	SOX2_HMG_3	24	0	-	0	0	.
chr3	42681777	42681778	chr3:42681778:G:A	rs74337917	G	A	G	SOX2_HMG_3	-3	0	+	0	0	.
chr3	42713419	42713420	chr3:42713420:A:G	rs3895740	A	G	G	SOX2_HMG_3	10	1	+	2.8478031835742184	-4.0609515957410025	TTACATTGGTAGTGATG
chr3	42725866	42725867	chr3:42725867:A:G	rs339731	A	G	A	SOX2_HMG_3	-3	0	-	0	0	.
chr3	42736370	42736371	chr3:42736371:A:G	rs11922251	A	G	G	SOX2_HMG_3	-14	0	+	0	0	.
chr3	43364905	43364906	chr3:43364906:G:A	rs150764868	G	A	g	SOX2_HMG_3	-14	0	-	0	0	.
chr3	43632144	43632145	chr3:43632145:A:G	rs6441787	A	G	G	SOX2_HMG_3	31	0	-	0	0	.
chr3	43746519	43746520	chr3:43746520:G:A	rs141660788	G	A	g	SOX2_HMG_3	19	0	+	0	0	.
chr3	43753913	43753914	chr3:43753914:G:A	rs145982407	G	A	G	SOX2_HMG_3	25	0	-	0	0	.
chr3	44003874	44003875	chr3:44003875:A:G	rs6806281	A	G	G	SOX2_HMG_3	34	0	-	0	0	.
chr3	44099772	44099773	chr3:44099773:A:G	rs6789231	A	G	G	SOX2_HMG_3	19	0	-	0	0	.
chr3	44236793	44236794	chr3:44236794:A:C	rs9820036	A	C	C	SOX2_HMG_3	5	1	+	4.824401264357405	-2.084353514957817	TATCAATGGAATTAGTA
chr3	44236806	44236807	chr3:44236807:T:C	rs4682959	T	C	T	SOX2_HMG_3	18	0	+	0	0	.
chr3	44536795	44536796	chr3:44536796:G:T	rs2049777	G	T	T	SOX2_HMG_3	16	1	+	4.965323780275339	4.1622533384991485	AGCCAATGGTATGGATG
chr3	45025988	45025989	chr3:45025989:A:C	rs72864862	A	C	A	SOX2_HMG_3	-11	0	+	0	0	.
chr3	45097671	45097672	chr3:45097672:C:T	rs79330620	C	T	C	SOX2_HMG_3	-14	0	+	0	0	.
chr3	45100151	45100152	chr3:45100152:T:G	rs62242535	T	G	T	SOX2_HMG_3	-5	0	-	0	0	.
chr3	45167360	45167361	chr3:45167361:G:A	rs531673504	G	A	G	SOX2_HMG_3	-20	0	-	0	0	.
chr3	45308430	45308431	chr3:45308431:G:A	rs62242411	G	A	G	SOX2_HMG_3	-16	0	+	0	0	.
chr3	45319701	45319702	chr3:45319702:A:G	rs9829766	A	G	G	SOX2_HMG_3	-2	0	-	0	0	.
chr3	45437631	45437632	chr3:45437632:A:C	rs2138210	A	C	C	SOX2_HMG_3	-16	0	+	0	0	.
chr3	45643893	45643894	chr3:45643894:G:A	rs6765732	G	A	A	SOX2_HMG_3	30	0	+	0	0	.
chr3	45875525	45875526	chr3:45875526:C:T	rs74426244	C	T	C	SOX2_HMG_3	-15	0	-	0	0	.
chr3	45943675	45943676	chr3:45943676:C:T	rs543546527	C	T	C	SOX2_HMG_3	27	0	-	0	0	.
chr3	46080854	46080855	chr3:46080855:T:A	rs12486449	T	A	T	SOX2_HMG_3	36	0	+	0	0	.
chr3	46313127	46313128	chr3:46313128:A:G	rs140058837	A	G	A	SOX2_HMG_3	5	1	-	4.260547451764133	4.260547451764133	GCTCATTGGCATTGTAG
chr3	46313143	46313144	chr3:46313144:C:T	rs149884352	C	T	C	SOX2_HMG_3	-11	0	-	0	0	.
chr3	46370348	46370349	chr3:46370349:G:T	rs2734648	G	T	G	SOX2_HMG_3	-15	0	+	0	0	.
chr3	46421926	46421927	chr3:46421927:T:A	rs7627175	T	A	G	SOX2_HMG_3	-14	0	-	0	0	.
chr3	46421932	46421933	chr3:46421933:A:G	rs7624805	A	G	G	SOX2_HMG_3	-20	0	-	0	0	.
chr3	46451937	46451938	chr3:46451938:C:T	rs6766188	C	T	T	SOX2_HMG_3	-12	0	-	0	0	.
chr3	46544752	46544753	chr3:46544753:G:A	rs7626061	G	A	A	SOX2_HMG_3	3	1	-	10.159018545146997	3.2502637658317783	CATCAATTTAAGTGACG
chr3	46549613	46549614	chr3:46549614:T:A	rs6770574	T	A	T	SOX2_HMG_3	-16	0	-	0	0	.
chr3	46614860	46614861	chr3:46614861:A:G	rs873382	A	G	G	SOX2_HMG_3	-3	0	+	0	0	.
chr3	46638992	46638993	chr3:46638993:C:G	rs11709936	C	G	C	SOX2_HMG_3	13	1	-	6.371781840941276	-0.5369729383739441	TATCATTAGTATTGAAT
chr3	49076279	49076280	chr3:49076280:C:A	rs34580506	C	A	C	SOX2_HMG_3	17	0	-	0	0	.
chr3	49076295	49076296	chr3:49076296:C:T	rs73082362	C	T	c	SOX2_HMG_3	1	1	-	3.490326209994523	5.321973800073815	CGGCGATGTCAGTGATG
chr3	49643539	49643540	chr3:49643540:G:A	rs10452032	G	A	A	SOX2_HMG_3	-19	0	-	0	0	.
chr3	49802604	49802605	chr3:49802605:T:C	rs187062009	T	C	T	SOX2_HMG_3	10	1	-	3.650137616481231	-3.2586171628339895	GCTCAAGGGTAGTGTAG
chr3	50676031	50676032	chr3:50676032:A:C	rs193132573	A	C	A	SOX2_HMG_3	-5	0	+	0	0	.
chr3	50745933	50745934	chr3:50745934:T:C	rs60552386	T	C	T	SOX2_HMG_3	26	0	-	0	0	.
chr3	50792750	50792751	chr3:50792751:C:T	rs79264818	C	T	.	SOX2_HMG_3	-7	0	-	0	0	.
chr3	50830688	50830689	chr3:50830689:G:A	rs17051468	G	A	.	SOX2_HMG_3	-5	0	+	0	0	.
chr3	51432789	51432790	chr3:51432790:T:C	rs36140019	T	C	t	SOX2_HMG_3	4	1	-	3.4915649512534803	-3.41718982806174	GTGCAATGACATTTATG
chr3	51896833	51896834	chr3:51896834:T:C	rs57859638	T	C	T	SOX2_HMG_3	25	0	-	0	0	.
chr3	51902932	51902933	chr3:51902933:T:C	rs7635125	T	C	C	SOX2_HMG_3	-19	0	+	0	0	.
chr3	51941560	51941561	chr3:51941561:C:T	rs929533	C	T	C	SOX2_HMG_3	-13	0	-	0	0	.
chr3	52091376	52091377	chr3:52091377:T:C	rs12493204	T	C	T	SOX2_HMG_3	-6	0	-	0	0	.
chr3	52144539	52144540	chr3:52144540:G:A	rs148576317	G	A	G	SOX2_HMG_3	27	0	-	0	0	.
chr3	53624696	53624697	chr3:53624697:C:T	rs147846726	C	T	C	SOX2_HMG_3	-18	0	-	0	0	.
chr3	53823622	53823623	chr3:53823623:C:T	rs759532293	C	T	C	SOX2_HMG_3	29	0	+	0	0	.
chr3	53888229	53888230	chr3:53888230:A:G	rs2304576	A	G	G	SOX2_HMG_3	20	0	-	0	0	.
chr3	54191972	54191973	chr3:54191973:G:A	rs4077974	G	A	G	SOX2_HMG_3	15	1	+	2.4526386012641908	2.885112182815092	ATGCATTGGCATTGAGG
chr3	54226071	54226072	chr3:54226072:C:T	rs193269972	C	T	C	SOX2_HMG_3	30	0	-	0	0	.
chr3	54902643	54902644	chr3:54902644:G:A	rs17319204	G	A	G	SOX2_HMG_3	-7	0	+	0	0	.
chr3	54902661	54902662	chr3:54902662:T:G	rs17054529	T	G	T	SOX2_HMG_3	11	1	+	5.711716334559313	4.294636365339363	CATCCATTGCATTGTTG
chr3	55194184	55194185	chr3:55194185:T:G	rs11130464	T	G	T	SOX2_HMG_3	12	1	+	7.1304787068215685	0.22172392750634962	GATCAATGACGTTGAAC
chr3	55680483	55680484	chr3:55680484:T:C	rs75683922	T	C	T	SOX2_HMG_3	27	0	+	0	0	.
chr3	55729062	55729063	chr3:55729063:T:C	rs732887	T	C	t	SOX2_HMG_3	15	1	+	5.822828760809642	2.9801196046327836	AGTCCATAGTAGTGATG
chr3	55746779	55746780	chr3:55746780:A:G	rs2201516	A	G	A	SOX2_HMG_3	-7	0	+	0	0	.
chr3	55746786	55746787	chr3:55746787:T:C	rs1390194	T	C	T	SOX2_HMG_3	0	1	+	2.692448186132912	2.829777164181577	TATCAAAGCTGTTGATT
chr3	55746787	55746788	chr3:55746788:A:T	rs1390195	A	T	A	SOX2_HMG_3	1	1	+	2.692448186132912	-0.31359566639040254	TATCAAAGCTGTTGATT
chr3	56046313	56046314	chr3:56046314:A:G	rs1401406	A	G	a	SOX2_HMG_3	-1	0	-	0	0	.
chr3	56220641	56220642	chr3:56220642:A:G	rs73080543	A	G	A	SOX2_HMG_3	12	1	-	3.5451894124050267	-3.363565366910193	GGACAATTGCAGTGGAG
chr3	56278111	56278112	chr3:56278112:C:G	rs2167618	C	G	G	SOX2_HMG_3	-17	0	+	0	0	.
chr3	56302698	56302699	chr3:56302699:C:T	rs115233160	C	T	C	SOX2_HMG_3	-2	0	-	0	0	.
chr3	56443467	56443468	chr3:56443468:T:C	rs1878267	T	C	T	SOX2_HMG_3	0	1	+	4.231065118890831	4.368394096939495	TACCAATGTCATGGAAG
chr3	56788288	56788289	chr3:56788289:A:G	rs11712455	A	G	A	SOX2_HMG_3	11	1	-	4.4466694408534435	-2.246022057378904	AGGCAATTTCATTGGGG
chr3	56797238	56797239	chr3:56797239:T:C	rs35983891	T	C	T	SOX2_HMG_3	-1	0	+	0	0	.
chr3	57021179	57021180	chr3:57021180:T:C	rs142547657	T	C	T	SOX2_HMG_3	36	0	-	0	0	.
chr3	57036127	57036128	chr3:57036128:C:A	rs1010338	C	A	A	SOX2_HMG_3	31	0	+	0	0	.
chr3	57068329	57068330	chr3:57068330:C:T	rs79653423	C	T	C	SOX2_HMG_3	26	0	-	0	0	.
chr3	57434274	57434275	chr3:57434275:G:A	rs13070406	G	A	G	SOX2_HMG_3	-4	0	+	0	0	.
chr3	57438608	57438609	chr3:57438609:A:G	rs9878353	A	G	A	SOX2_HMG_3	34	0	-	0	0	.
chr3	57446217	57446218	chr3:57446218:T:C	rs62622492	T	C	t	SOX2_HMG_3	5	1	-	4.641190354035606	-2.2675644252796143	ATTCAATCGAATTGAGT
chr3	58419703	58419704	chr3:58419704:A:G	rs11714807	A	G	G	SOX2_HMG_3	1	1	+	6.428322531502448	4.596674941423158	GAACAATGGTACTGAGA
chr3	58423335	58423336	chr3:58423336:T:C	rs12631656	T	C	T	SOX2_HMG_3	-9	0	-	0	0	.
chr3	58433992	58433993	chr3:58433993:G:A	rs578033247	G	A	G	SOX2_HMG_3	-16	0	+	0	0	.
chr3	58434038	58434039	chr3:58434039:G:C	rs116112173	G	C	G	SOX2_HMG_3	30	0	+	0	0	.
chr3	59043462	59043463	chr3:59043463:A:G	rs7649388	A	G	A	SOX2_HMG_3	14	1	+	2.1199316365472933	-2.061945980753826	GATCAAAGCCACTGAGG
chr3	59331621	59331622	chr3:59331622:A:T	rs12489630	A	T	A	SOX2_HMG_3	-13	0	-	0	0	.
chr3	59501794	59501795	chr3:59501795:C:A	rs9869179	C	A	A	SOX2_HMG_3	31	0	+	0	0	.
chr3	60087426	60087427	chr3:60087427:T:C	rs7635362	T	C	T	SOX2_HMG_3	35	0	+	0	0	.
chr3	60101951	60101952	chr3:60101952:G:C	rs6783062	G	C	G	SOX2_HMG_3	-17	0	+	0	0	.
chr3	60102001	60102002	chr3:60102002:A:G	rs6772047	A	G	A	SOX2_HMG_3	33	0	+	0	0	.
chr3	60487236	60487237	chr3:60487237:C:G	rs2362894	C	G	C	SOX2_HMG_3	-16	0	-	0	0	.
chr3	60527155	60527156	chr3:60527156:A:G	rs241704	A	G	A	SOX2_HMG_3	11	1	-	4.452246124567358	-2.2404453736649885	CAGTAATGTAATTGAAG
chr3	60920496	60920497	chr3:60920497:G:A	rs11713112	G	A	G	SOX2_HMG_3	14	1	+	3.3055833606673133	7.487460977968432	GATCAGTGGTAGTGGCA
chr3	60948076	60948077	chr3:60948077:G:A	rs1562524	G	A	G	SOX2_HMG_3	-11	0	-	0	0	.
chr3	61035515	61035516	chr3:61035516:T:C	rs17064329	T	C	C	SOX2_HMG_3	26	0	-	0	0	.
chr3	61519110	61519111	chr3:61519111:G:A	rs35581372	G	A	G	SOX2_HMG_3	3	1	-	3.918728704307389	-2.9900260750078314	ATACAATGCTATGGATA
chr3	61581088	61581089	chr3:61581089:C:T	rs115811120	C	T	C	SOX2_HMG_3	26	0	+	0	0	.
chr3	61597156	61597157	chr3:61597157:C:T	rs7612843	C	T	C	SOX2_HMG_3	0	1	-	2.7756047081002837	2.55501042901499	GATTAATGTCATTAAGG
chr3	61662961	61662962	chr3:61662962:T:C	rs2365936	T	C	T	SOX2_HMG_3	33	0	-	0	0	.
chr3	61674894	61674895	chr3:61674895:T:G	rs7619562	T	G	T	SOX2_HMG_3	34	0	+	0	0	.
chr3	61718840	61718841	chr3:61718841:G:A	rs685896	G	A	A	SOX2_HMG_3	0	1	+	11.543600615823166	11.323006336737873	GTTCAATGCTATTGACT
chr3	61734798	61734799	chr3:61734799:C:G	rs77968518	C	G	C	SOX2_HMG_3	29	0	-	0	0	.
chr3	62809378	62809379	chr3:62809379:T:C	rs574995020	T	C	T	SOX2_HMG_3	-9	0	-	0	0	.
chr3	63451226	63451227	chr3:63451227:C:T	rs17068589	C	T	C	SOX2_HMG_3	24	0	+	0	0	.
chr3	63532823	63532824	chr3:63532824:A:T	chr3:63532824:A:T	A	T	A	SOX2_HMG_3	5	1	+	3.991293389000184	-2.9174613903150366	GCCCAATGAAATTGTAA
chr3	63753942	63753943	chr3:63753943:T:C	rs34520803	T	C	C	SOX2_HMG_3	31	0	+	0	0	.
chr3	63968972	63968973	chr3:63968973:A:G	rs3774721	A	G	A	SOX2_HMG_3	9	1	-	5.451536140860191	4.644866006923144	AATCAATTATAGAGAAT
chr3	64017428	64017429	chr3:64017429:G:A	rs76478992	G	A	G	SOX2_HMG_3	34	0	+	0	0	.
chr3	64047084	64047085	chr3:64047085:C:A	rs6769680	C	A	C	SOX2_HMG_3	-3	0	+	0	0	.
chr3	64121891	64121892	chr3:64121892:A:C	rs704384	A	C	C	SOX2_HMG_3	18	0	+	0	0	.
chr3	64160082	64160083	chr3:64160083:T:C	rs2306380	T	C	T	SOX2_HMG_3	-7	0	+	0	0	.
chr3	64385751	64385752	chr3:64385752:T:C	rs112394914	T	C	C	SOX2_HMG_3	12	1	+	5.044210502158656	-1.864544277156565	AATCAAAATCAGTGAGA
chr3	64448486	64448487	chr3:64448487:G:A	rs9844520	G	A	A	SOX2_HMG_3	-8	0	-	0	0	.
chr3	64563054	64563055	chr3:64563055:C:T	rs4688481	C	T	T	SOX2_HMG_3	1	1	+	6.16711292072247	6.16711292072247	GCTCAATTGTATTAATT
chr3	64827492	64827493	chr3:64827493:G:A	rs17071575	G	A	G	SOX2_HMG_3	-11	0	-	0	0	.
chr3	64961358	64961359	chr3:64961359:T:C	rs80271139	T	C	T	SOX2_HMG_3	-5	0	-	0	0	.
chr3	64972827	64972828	chr3:64972828:T:C	rs35301373	T	C	T	SOX2_HMG_3	5	1	-	6.756188506824172	-0.15256627249104893	ATGCAATGTAAGTGAGA
chr3	65110883	65110884	chr3:65110884:T:C	rs17402887	T	C	T	SOX2_HMG_3	-5	0	-	0	0	.
chr3	65130525	65130526	chr3:65130526:G:A	rs1482609	G	A	g	SOX2_HMG_3	11	1	+	5.935723942320065	0.6601124133076666	CATCAATGGCTGTGACA
chr3	65230695	65230696	chr3:65230696:C:G	rs143192638	C	G	C	SOX2_HMG_3	14	1	+	3.752371900850685	6.402792989116259	CAGCAATGGCAGTGCAA
chr3	65292265	65292266	chr3:65292266:C:T	rs11715903	C	T	C	SOX2_HMG_3	-12	0	-	0	0	.
chr3	65535648	65535649	chr3:65535649:A:G	rs17073070	A	G	A	SOX2_HMG_3	5	1	+	8.823281652951486	1.9145268736362633	TATCAATGGCATTCAAA
chr3	65816311	65816312	chr3:65816312:T:G	rs1473530	T	G	G	SOX2_HMG_3	22	0	+	0	0	.
chr3	66002053	66002054	chr3:66002054:C:T	rs6779615	C	T	C	SOX2_HMG_3	15	1	-	7.425348133092237	7.857821714643137	AATCTATGAAATTGAGG
chr3	66129110	66129111	chr3:66129111:G:A	rs28711993	G	A	A	SOX2_HMG_3	-16	0	+	0	0	.
chr3	66180386	66180387	chr3:66180387:A:G	rs143935578	A	G	A	SOX2_HMG_3	-15	0	+	0	0	.
chr3	66345265	66345266	chr3:66345266:T:C	rs332359	T	C	C	SOX2_HMG_3	-3	0	-	0	0	.
chr3	66345274	66345275	chr3:66345275:T:C	rs332358	T	C	C	SOX2_HMG_3	-12	0	-	0	0	.
chr3	66353640	66353641	chr3:66353641:A:G	rs9868446	A	G	A	SOX2_HMG_3	-6	0	-	0	0	.
chr3	66516783	66516784	chr3:66516784:T:C	rs7646790	T	C	T	SOX2_HMG_3	5	1	-	6.147138961993253	-0.7616158173219669	TAACAATGCTATTGGCA
chr3	66890298	66890299	chr3:66890299:T:C	rs17045469	T	C	T	SOX2_HMG_3	22	0	-	0	0	.
chr3	66910775	66910776	chr3:66910776:C:T	rs1563442	C	T	T	SOX2_HMG_3	36	0	-	0	0	.
chr3	67133867	67133868	chr3:67133868:T:C	rs73091784	T	C	T	SOX2_HMG_3	6	1	+	5.278150697509388	-1.6306040818058332	GTTTAATACTATTGATA
chr3	67133872	67133873	chr3:67133873:T:C	rs73093447	T	C	c	SOX2_HMG_3	11	1	+	5.278150697509388	-1.4145408007229587	GTTTAATACTATTGATA
chr3	67142335	67142336	chr3:67142336:T:C	rs61212581	T	C	T	SOX2_HMG_3	-15	0	+	0	0	.
chr3	67212813	67212814	chr3:67212814:G:A	rs4128751	G	A	G	SOX2_HMG_3	-13	0	-	0	0	.
chr3	67480735	67480736	chr3:67480736:A:G	rs76504776	A	G	A	SOX2_HMG_3	-8	0	+	0	0	.
chr3	67557843	67557844	chr3:67557844:C:T	rs2634736	C	T	T	SOX2_HMG_3	23	0	-	0	0	.
chr3	67641978	67641979	chr3:67641979:A:T	rs11707967	A	T	A	SOX2_HMG_3	-20	0	+	0	0	.
chr3	67901882	67901883	chr3:67901883:C:T	rs1868185	C	T	T	SOX2_HMG_3	25	0	-	0	0	.
chr3	69033639	69033640	chr3:69033640:G:C	chr3:69033640:G:C	G	C	G	SOX2_HMG_3	7	1	+	5.219954761177881	-1.5128874502580927	AAGCAATGGTCTTGTTG
chr3	69535881	69535882	chr3:69535882:T:C	rs7644318	T	C	C	SOX2_HMG_3	6	1	+	3.6790161944696345	-3.229738584845584	AAGCAATGCCATTCTTG
chr3	69665445	69665446	chr3:69665446:C:T	rs1322976474	C	T	C	SOX2_HMG_3	13	1	-	3.4657342573390673	-3.443020521976153	CAGGAATGAAATTGAAG
chr3	69683128	69683129	chr3:69683129:C:T	rs2114659	C	T	C	SOX2_HMG_3	-12	0	-	0	0	.
chr3	69719781	69719782	chr3:69719782:A:G	rs7622943	A	G	A	SOX2_HMG_3	22	0	+	0	0	.
chr3	69719788	69719789	chr3:69719789:T:C	rs7625281	T	C	T	SOX2_HMG_3	29	0	+	0	0	.
chr3	69738851	69738852	chr3:69738852:T:C	rs193122476	T	C	T	SOX2_HMG_3	2	1	+	4.336518268501688	-0.6668538018138994	GATGAATACTATTGTAA
chr3	69970471	69970472	chr3:69970472:T:A	rs1491688	T	A	T	SOX2_HMG_3	22	0	+	0	0	.
chr3	70044570	70044571	chr3:70044571:A:G	rs13094951	A	G	A	SOX2_HMG_3	-8	0	+	0	0	.
chr3	70108379	70108380	chr3:70108380:C:A	rs60995599	C	A	G	SOX2_HMG_3	-9	0	+	0	0	.
chr3	70281683	70281684	chr3:70281684:A:G	rs939864	A	G	A	SOX2_HMG_3	12	1	-	3.9992286711409752	-2.909526108174245	AAGCAATGATGGTGAGG
chr3	70935907	70935908	chr3:70935908:C:A	rs11928769	C	A	C	SOX2_HMG_3	0	1	-	10.897263926577802	10.014868046817814	GAACAATGGCAGTGAGA
chr3	71227983	71227984	chr3:71227984:T:C	rs2686275	T	C	T	SOX2_HMG_3	-13	0	+	0	0	.
chr3	71309733	71309734	chr3:71309734:C:A	rs557117932	C	A	C	SOX2_HMG_3	0	1	+	4.708009173342949	5.2324817959689796	CTTCAATGATTTTGTTG
chr3	71429762	71429763	chr3:71429763:C:T	rs115916492	C	T	.	SOX2_HMG_3	10	1	-	4.256633495175395	11.165388274490615	TTTCAATGACGGTGATT
chr3	71514580	71514581	chr3:71514581:A:G	rs13078958	A	G	A	SOX2_HMG_3	2	1	+	4.250037038397204	4.250037038397204	GAACAATTGAATAGATG
chr3	71723466	71723467	chr3:71723467:T:C	rs9680899	T	C	T	SOX2_HMG_3	-2	0	+	0	0	.
chr3	71790250	71790251	chr3:71790251:G:A	rs1343839	G	A	G	SOX2_HMG_3	15	1	-	6.820644972140352	9.663354128317211	AGGCAATGACAGTGACA
chr3	72075898	72075899	chr3:72075899:T:C	rs67908047	T	C	T	SOX2_HMG_3	27	0	-	0	0	.
chr3	72237572	72237573	chr3:72237573:G:A	rs34741169	G	A	G	SOX2_HMG_3	29	0	+	0	0	.
chr3	72448498	72448499	chr3:72448499:T:C	rs74427156	T	C	T	SOX2_HMG_3	10	1	-	2.7127895833699047	-4.195965195945316	GATCAAACTTATTGTTG
chr3	72791312	72791313	chr3:72791313:G:A	rs765306694	G	A	G	SOX2_HMG_3	11	1	+	6.700571903855296	1.4249603748428985	GATCAAATGAAGTGATG
chr3	73147016	73147017	chr3:73147017:C:A	rs2007172	C	A	C	SOX2_HMG_3	11	1	-	3.3172897418025427	4.734369711022492	CCTCAATAGCAGGGATG
chr3	73325290	73325291	chr3:73325291:T:C	rs4677261	T	C	C	SOX2_HMG_3	5	1	-	4.256633495175394	-2.652121284139825	TTTTAATGACAGTGATT
chr3	73378631	73378632	chr3:73378632:T:C	rs76805403	T	C	T	SOX2_HMG_3	20	0	+	0	0	.
chr3	73509502	73509503	chr3:73509503:C:T	rs4676929	C	T	C	SOX2_HMG_3	27	0	+	0	0	.
chr3	73510472	73510473	chr3:73510473:T:C	rs4557100	T	C	T	SOX2_HMG_3	-14	0	+	0	0	.
chr3	73557486	73557487	chr3:73557487:C:T	rs35594519	C	T	C	SOX2_HMG_3	-12	0	-	0	0	.
chr3	73656392	73656393	chr3:73656393:C:T	rs13082404	C	T	C	SOX2_HMG_3	23	0	+	0	0	.
chr3	73656396	73656397	chr3:73656397:C:T	rs137864514	C	T	C	SOX2_HMG_3	27	0	+	0	0	.
chr3	73656402	73656403	chr3:73656403:C:T	rs192963395	C	T	C	SOX2_HMG_3	33	0	+	0	0	.
chr3	73773459	73773460	chr3:73773460:G:A	rs9814002	G	A	G	SOX2_HMG_3	10	1	-	2.6113331362886156	2.6113331362886156	GGTCAAGGTCCTTGATG
chr3	73953001	73953002	chr3:73953002:G:A	rs9857728	G	A	A	SOX2_HMG_3	3	1	-	8.419606894808213	1.5108521154929933	ATACAATTTTATTGAAA
chr3	74712171	74712172	chr3:74712172:C:T	rs114369103	C	T	C	SOX2_HMG_3	-5	0	+	0	0	.
chr3	75350135	75350136	chr3:75350136:A:T	rs7613668	A	T	.	SOX2_HMG_3	12	1	-	4.931204735239715	-1.9775500440755058	AGCCAATGGAAGTGAGC
chr3	75672365	75672366	chr3:75672366:A:G	rs73126903	A	G	a	SOX2_HMG_3	-11	0	+	0	0	.
chr3	75915704	75915705	chr3:75915705:A:G	rs9869831	A	G	A	SOX2_HMG_3	-14	0	+	0	0	.
chr3	76047488	76047489	chr3:76047489:G:C	rs73841090	G	C	C	SOX2_HMG_3	35	0	+	0	0	.
chr3	76138767	76138768	chr3:76138768:T:G	rs7648349	T	G	T	SOX2_HMG_3	33	0	-	0	0	.
chr3	76350047	76350048	chr3:76350048:C:G	rs6769224	C	G	C	SOX2_HMG_3	17	0	-	0	0	.
chr3	77042530	77042531	chr3:77042531:T:G	rs57050685	T	G	T	SOX2_HMG_3	9	1	-	6.545513014269882	7.597418222279564	GAGCAATTTAATTGTAT
chr3	77119039	77119040	chr3:77119040:G:C	rs7649552	G	C	C	SOX2_HMG_3	0	1	+	8.133411290491749	7.388344388780425	GATGAATGGTAGTGAGT
chr3	77284505	77284506	chr3:77284506:T:A	rs62249726	T	A	T	SOX2_HMG_3	10	1	-	3.028286965392262	-3.8804678139229574	AGAAAATGACAGTGATG
chr3	77693257	77693258	chr3:77693258:G:A	rs776105	G	A	G	SOX2_HMG_3	-12	0	-	0	0	.
chr3	77705181	77705182	chr3:77705182:A:G	rs2044890	A	G	A	SOX2_HMG_3	27	0	+	0	0	.
chr3	77726421	77726422	chr3:77726422:G:A	rs60342231	G	A	G	SOX2_HMG_3	-16	0	+	0	0	.
chr3	77781084	77781085	chr3:77781085:A:T	rs72891852	A	T	A	SOX2_HMG_3	-16	0	+	0	0	.
chr3	77945661	77945662	chr3:77945662:G:A	rs11127609	G	A	G	SOX2_HMG_3	-16	0	+	0	0	.
chr3	78870699	78870700	chr3:78870700:C:T	rs538020334	C	T	C	SOX2_HMG_3	-13	0	-	0	0	.
chr3	79098429	79098430	chr3:79098430:T:C	rs74719498	T	C	T	SOX2_HMG_3	-11	0	+	0	0	.
chr3	79141534	79141535	chr3:79141535:G:C	rs7619949	G	C	G	SOX2_HMG_3	-9	0	-	0	0	.
chr3	79423632	79423633	chr3:79423633:G:C	rs1008273801	G	C	G	SOX2_HMG_3	8	1	+	4.837920404161659	4.103651971390459	GCTCAATTGACTTGATA
chr3	79423646	79423647	chr3:79423647:G:A	rs56964141	G	A	G	SOX2_HMG_3	22	0	+	0	0	.
chr3	79761855	79761856	chr3:79761856:A:G	rs10865579	A	G	A	SOX2_HMG_3	5	1	+	4.417844794733713	-2.4909099845815073	GAGCAATTGTTGTGATA
chr3	80239524	80239525	chr3:80239525:C:T	rs2202862	C	T	C	SOX2_HMG_3	7	1	-	3.281848085641761	0.5530609650804257	AATCAAGGGCATGGATT
chr3	80367000	80367001	chr3:80367001:C:T	rs188766889	C	T	A	SOX2_HMG_3	-2	0	+	0	0	.
chr3	80734082	80734083	chr3:80734083:T:C	rs36040644	T	C	T	SOX2_HMG_3	-17	0	-	0	0	.
chr3	81034167	81034168	chr3:81034168:G:C	rs2639266	G	C	C	SOX2_HMG_3	-7	0	+	0	0	.
chr3	81106033	81106034	chr3:81106034:G:T	rs893517	G	T	T	SOX2_HMG_3	26	0	-	0	0	.
chr3	81162269	81162270	chr3:81162270:A:G	rs12490101	A	G	A	SOX2_HMG_3	-5	0	-	0	0	.
chr3	81162276	81162277	chr3:81162277:T:C	rs12487117	T	C	T	SOX2_HMG_3	-12	0	-	0	0	.
chr3	81218382	81218383	chr3:81218383:T:C	rs17018692	T	C	T	SOX2_HMG_3	36	0	-	0	0	.
chr3	81911319	81911320	chr3:81911320:T:G	rs779542453	T	G	T	SOX2_HMG_3	6	1	+	2.2358685006975243	-4.672886278617696	CCTCAGTGTCAGTGTAG
chr3	83171950	83171951	chr3:83171951:C:T	rs79278193	C	T	C	SOX2_HMG_3	0	1	+	5.971777772533223	5.834448794484558	CATAAATATTATTGTTG
chr3	83499053	83499054	chr3:83499054:G:A	rs4856458	G	A	G	SOX2_HMG_3	13	1	+	2.531618861672392	-4.3771359176428275	AATCATAGTCAGTGATA
chr3	85215115	85215116	chr3:85215116:G:A	rs13078384	G	A	G	SOX2_HMG_3	28	0	-	0	0	.
chr3	85636236	85636237	chr3:85636237:C:T	rs75699990	C	T	C	SOX2_HMG_3	-12	0	+	0	0	.
chr3	85636257	85636258	chr3:85636258:C:T	rs11714008	C	T	T	SOX2_HMG_3	9	1	+	4.661430215695082	5.468100349632129	AGACAATGACACTGATG
chr3	85670606	85670607	chr3:85670607:G:A	rs4464471	G	A	G	SOX2_HMG_3	-14	0	+	0	0	.
chr3	85989539	85989540	chr3:85989540:G:T	rs62261591	G	T	G	SOX2_HMG_3	33	0	+	0	0	.
chr3	86056182	86056183	chr3:86056183:G:T	rs73136136	G	T	G	SOX2_HMG_3	23	0	+	0	0	.
chr3	86056189	86056190	chr3:86056190:G:A	rs9866277	G	A	A	SOX2_HMG_3	30	0	+	0	0	.
chr3	86215954	86215955	chr3:86215955:T:C	rs1949198	T	C	C	SOX2_HMG_3	31	0	-	0	0	.
chr3	86629328	86629329	chr3:86629329:A:G	rs9815232	A	G	A	SOX2_HMG_3	16	1	+	8.143524841670617	8.417212458060888	CTGCAATTATATTGATA
chr3	86793501	86793502	chr3:86793502:C:T	rs59662471	C	T	T	SOX2_HMG_3	1	1	-	2.045632913644277	3.877280503723568	GGTGAATGGTATAGAAG
chr3	86868295	86868296	chr3:86868296:C:T	rs9842925	C	T	T	SOX2_HMG_3	30	0	-	0	0	.
chr3	86936902	86936903	chr3:86936903:C:A	rs4859084	C	A	A	SOX2_HMG_3	35	0	+	0	0	.
chr3	87541717	87541718	chr3:87541718:T:A	rs9855058	T	A	T	SOX2_HMG_3	-6	0	+	0	0	.
chr3	87914635	87914636	chr3:87914636:C:T	rs13320429	C	T	C	SOX2_HMG_3	13	1	-	10.056249262186606	3.1474944828713856	GGTCAATGGAATTGTGT
chr3	88059099	88059100	chr3:88059100:G:A	rs181103960	G	A	G	SOX2_HMG_3	11	1	+	3.3449187668544234	-1.9306927621579744	CACCAATAGTAGTGGAA
chr3	88059971	88059972	chr3:88059972:A:C	chr3:88059972:A:C	A	C	A	SOX2_HMG_3	12	1	-	2.813176009353345	-4.095578769961874	GAACAGTGGCAGTGACA
chr3	88257635	88257636	chr3:88257636:T:G	rs6551306	T	G	T	SOX2_HMG_3	26	0	+	0	0	.
chr3	88574923	88574924	chr3:88574924:G:A	rs6551351	G	A	G	SOX2_HMG_3	-15	0	-	0	0	.
chr3	88990810	88990811	chr3:88990811:G:A	rs6803153	G	A	A	SOX2_HMG_3	-16	0	+	0	0	.
chr3	89255457	89255458	chr3:89255458:C:T	rs6794198	C	T	C	SOX2_HMG_3	20	0	+	0	0	.
chr3	89841333	89841334	chr3:89841334:G:A	rs13083420	G	A	G	SOX2_HMG_3	-9	0	-	0	0	.
chr3	90062789	90062790	chr3:90062790:G:T	rs76408732	G	T	G	SOX2_HMG_3	-16	0	-	0	0	.
chr3	94291973	94291974	chr3:94291974:A:G	rs1584925	A	G	G	SOX2_HMG_3	-1	0	-	0	0	.
chr3	94314994	94314995	chr3:94314995:T:G	rs7625227	T	G	T	SOX2_HMG_3	-13	0	-	0	0	.
chr3	94391157	94391158	chr3:94391158:G:A	rs9838757	G	A	G	SOX2_HMG_3	2	1	+	3.788821195297473	3.788821195297473	AAGCAATTGCAATGAAA
chr3	94481702	94481703	chr3:94481703:C:T	rs1002892489	C	T	C	SOX2_HMG_3	22	0	-	0	0	.
chr3	95281241	95281242	chr3:95281242:T:C	rs184977313	T	C	T	SOX2_HMG_3	5	1	-	3.9283954376959778	-2.9803593416192435	ATCCAAGGTTATTGATG
chr3	96201724	96201725	chr3:96201725:C:T	rs11714452	C	T	T	SOX2_HMG_3	33	0	-	0	0	.
chr3	96281133	96281134	chr3:96281134:A:C	rs7631393	A	C	C	SOX2_HMG_3	-19	0	+	0	0	.
chr3	96358069	96358070	chr3:96358070:G:T	rs11718109	G	T	G	SOX2_HMG_3	20	0	-	0	0	.
chr3	96843694	96843695	chr3:96843695:A:G	rs72931367	A	G	A	SOX2_HMG_3	12	1	-	4.883955093854179	-2.0247996854610406	TGCCAATTCAAGTGATA
chr3	97779125	97779126	chr3:97779126:C:T	rs7620134	C	T	C	SOX2_HMG_3	32	0	-	0	0	.
chr3	97872683	97872684	chr3:97872684:A:G	rs186224760	A	G	A	SOX2_HMG_3	-4	0	-	0	0	.
chr3	97953231	97953232	chr3:97953232:C:T	rs9879532	C	T	C	SOX2_HMG_3	16	1	-	5.294282500719758	5.020594884329487	GATAAATTCTATTGTAG
chr3	98050932	98050933	chr3:98050933:G:A	rs9289510	G	A	A	SOX2_HMG_3	-1	0	+	0	0	.
chr3	98189870	98189871	chr3:98189871:T:G	rs137915854	T	G	T	SOX2_HMG_3	0	1	+	11.52180878803609	12.404204667796078	TTTCAATGGCATTGTTG
chr3	98523258	98523259	chr3:98523259:T:C	rs6799550	T	C	T	SOX2_HMG_3	30	0	+	0	0	.
chr3	98709901	98709902	chr3:98709902:G:A	rs16840077	G	A	G	SOX2_HMG_3	26	0	-	0	0	.
chr3	98754473	98754474	chr3:98754474:G:A	rs828602	G	A	g	SOX2_HMG_3	33	0	+	0	0	.
chr3	98973056	98973057	chr3:98973057:A:C	rs7432439	A	C	A	SOX2_HMG_3	24	0	-	0	0	.
chr3	99250592	99250593	chr3:99250593:C:G	rs6807964	C	G	G	SOX2_HMG_3	-3	0	+	0	0	.
chr3	99410170	99410171	chr3:99410171:G:T	rs2623321	G	T	T	SOX2_HMG_3	24	0	-	0	0	.
chr3	99412999	99413000	chr3:99413000:T:C	rs4365660	T	C	C	SOX2_HMG_3	6	1	+	3.725541054750705	-3.1832137245645153	AAACCATGATAGTGAGA
chr3	99419434	99419435	chr3:99419435:C:T	rs2623349	C	T	T	SOX2_HMG_3	17	0	-	0	0	.
chr3	100076177	100076178	chr3:100076178:T:G	rs184297350	T	G	T	SOX2_HMG_3	7	1	-	5.913774232468354	1.909719141593715	GATCAAAATTATTGTTT
chr3	100227977	100227978	chr3:100227978:A:G	rs12492610	A	G	A	SOX2_HMG_3	-1	0	+	0	0	.
chr3	100256613	100256614	chr3:100256614:T:A	rs77760672	T	A	T	SOX2_HMG_3	-12	0	-	0	0	.
chr3	100361288	100361289	chr3:100361289:T:A	rs115523307	T	A	T	SOX2_HMG_3	-8	0	+	0	0	.
chr3	100777364	100777365	chr3:100777365:C:A	rs75445005	C	A	C	SOX2_HMG_3	-15	0	+	0	0	.
chr3	101223188	101223189	chr3:101223189:A:T	rs511575	A	T	T	SOX2_HMG_3	-8	0	-	0	0	.
chr3	101252075	101252076	chr3:101252076:A:C	rs348881	A	C	A	SOX2_HMG_3	24	0	+	0	0	.
chr3	101465289	101465290	chr3:101465290:A:G	rs7653081	A	G	A	SOX2_HMG_3	30	0	-	0	0	.
chr3	101640778	101640779	chr3:101640779:A:G	rs13082236	A	G	A	SOX2_HMG_3	5	1	+	1.817838796393698	-5.090915982921524	CATCAATGGGACTGAAC
chr3	101677684	101677685	chr3:101677685:G:C	rs3806654	G	C	C	SOX2_HMG_3	7	1	+	8.241556209546223	1.5087139981102478	AGTCAATGTTATTGCGA
chr3	101903481	101903482	chr3:101903482:T:C	rs16844399	T	C	T	SOX2_HMG_3	30	0	-	0	0	.
chr3	101935453	101935454	chr3:101935454:A:G	rs2951443	A	G	a	SOX2_HMG_3	23	0	+	0	0	.
chr3	101977855	101977856	chr3:101977856:A:G	rs1019710148	A	G	A	SOX2_HMG_3	28	0	-	0	0	.
chr3	101993869	101993870	chr3:101993870:A:G	rs771789	A	G	G	SOX2_HMG_3	-7	0	+	0	0	.
chr3	101993894	101993895	chr3:101993895:C:T	rs12639221	C	T	C	SOX2_HMG_3	18	0	+	0	0	.
chr3	102094286	102094287	chr3:102094287:T:C	rs9832010	T	C	T	SOX2_HMG_3	6	1	-	8.157234934294895	8.157234934294895	TATCAAAGAAATTGATA
chr3	102378483	102378484	chr3:102378484:T:G	rs11927258	T	G	G	SOX2_HMG_3	10	1	-	3.7764082728948707	-3.1323465064203506	CATGAATGTTAGTGGAT
chr3	102888078	102888079	chr3:102888079:T:A	rs1877271	T	A	T	SOX2_HMG_3	20	0	-	0	0	.
chr3	102937272	102937273	chr3:102937273:G:A	rs16845838	G	A	A	SOX2_HMG_3	16	1	-	5.267629153211023	6.4644012063513765	CATCTATATTAGTGATC
chr3	104553416	104553417	chr3:104553417:G:A	rs2063815	G	A	G	SOX2_HMG_3	-9	0	+	0	0	.
chr3	104701417	104701418	chr3:104701418:A:C	rs2139964	A	C	C	SOX2_HMG_3	17	0	+	0	0	.
chr3	104814403	104814404	chr3:104814404:T:C	rs9862355	T	C	C	SOX2_HMG_3	26	0	-	0	0	.
chr3	104890715	104890716	chr3:104890716:G:A	rs12491580	G	A	G	SOX2_HMG_3	-20	0	-	0	0	.
chr3	104948125	104948126	chr3:104948126:A:C	rs6806605	A	C	C	SOX2_HMG_3	-19	0	+	0	0	.
chr3	104948131	104948132	chr3:104948132:T:C	rs13066237	T	C	C	SOX2_HMG_3	-13	0	+	0	0	.
chr3	105030518	105030519	chr3:105030519:C:T	rs35820849	C	T	C	SOX2_HMG_3	26	0	-	0	0	.
chr3	105059113	105059114	chr3:105059114:T:C	rs10933804	T	C	C	SOX2_HMG_3	10	1	-	3.7101581367100884	-3.198596642605133	AGTCAATATTATGGAGC
chr3	105703999	105704000	chr3:105704000:C:T	rs2305037	C	T	C	SOX2_HMG_3	-16	0	-	0	0	.
chr3	105746863	105746864	chr3:105746864:T:C	rs148156634	T	C	T	SOX2_HMG_3	22	0	+	0	0	.
chr3	105826018	105826019	chr3:105826019:C:T	rs1992522	C	T	C	SOX2_HMG_3	22	0	-	0	0	.
chr3	105978911	105978912	chr3:105978912:C:G	rs71631538	C	G	G	SOX2_HMG_3	1	1	+	5.132128531406942	6.306524793850966	ACTCAATGTAATAGAGA
chr3	106276513	106276514	chr3:106276514:T:C	rs6798172	T	C	T	SOX2_HMG_3	9	1	+	5.359624114014265	4.552953980077219	AATCAACTTTAGTGACA
chr3	106338887	106338888	chr3:106338888:T:A	rs6788146	T	A	T	SOX2_HMG_3	18	0	-	0	0	.
chr3	106986459	106986460	chr3:106986460:A:G	rs1709938	A	G	G	SOX2_HMG_3	-6	0	-	0	0	.
chr3	107242472	107242473	chr3:107242473:C:G	rs1283107	C	G	G	SOX2_HMG_3	30	0	-	0	0	.
chr3	107893150	107893151	chr3:107893151:G:T	rs190371971	G	T	G	SOX2_HMG_3	2	1	+	2.813176009353345	6.680790844031387	GAGCACTGGCAGTGACA
chr3	107893173	107893174	chr3:107893174:G:T	rs184151674	G	T	G	SOX2_HMG_3	25	0	+	0	0	.
chr3	107958124	107958125	chr3:107958125:C:G	rs112996921	C	G	C	SOX2_HMG_3	-19	0	-	0	0	.
chr3	108222859	108222860	chr3:108222860:A:G	rs921564554	A	G	A	SOX2_HMG_3	11	1	-	3.151191772401582	-3.5414997258307648	AACCTATGGTATTGACT
chr3	108222884	108222885	chr3:108222885:A:G	rs79692099	A	G	A	SOX2_HMG_3	-14	0	-	0	0	.
chr3	108223753	108223754	chr3:108223754:G:T	rs9838839	G	T	G	SOX2_HMG_3	24	0	-	0	0	.
chr3	108588687	108588688	chr3:108588688:A:G	rs545627285	A	G	A	SOX2_HMG_3	19	0	-	0	0	.
chr3	108892209	108892210	chr3:108892210:A:G	rs4522770	A	G	A	SOX2_HMG_3	2	1	-	5.046440893291311	0.04306882297572251	GATCAATGGCAGAGTAT
chr3	109224192	109224193	chr3:109224193:G:A	rs1163372	G	A	.	SOX2_HMG_3	20	0	-	0	0	.
chr3	109792663	109792664	chr3:109792664:T:C	rs75159448	T	C	T	SOX2_HMG_3	-16	0	-	0	0	.
chr3	109802293	109802294	chr3:109802294:A:G	chr3:109802294:A:G	A	G	A	SOX2_HMG_3	5	1	+	5.115340367790354	-1.793414411524867	TGTCAATGTAATTAAGT
chr3	109818211	109818212	chr3:109818212:C:G	rs142619023	C	G	C	SOX2_HMG_3	-18	0	+	0	0	.
chr3	110492794	110492795	chr3:110492795:A:G	rs77957848	A	G	A	SOX2_HMG_3	-14	0	+	0	0	.
chr3	110774698	110774699	chr3:110774699:C:T	rs12695218	C	T	C	SOX2_HMG_3	18	0	-	0	0	.
chr3	111210243	111210244	chr3:111210244:A:G	rs57976070	A	G	A	SOX2_HMG_3	30	0	+	0	0	.
chr3	111210397	111210398	chr3:111210398:C:A	rs4682242	C	A	A	SOX2_HMG_3	-12	0	+	0	0	.
chr3	111316372	111316373	chr3:111316373:G:T	rs140009617	G	T	G	SOX2_HMG_3	19	0	+	0	0	.
chr3	111332438	111332439	chr3:111332439:G:A	rs2130078	G	A	g	SOX2_HMG_3	7	1	+	5.182194991385927	2.4534078708245914	TGTCAAAGAAAGTGATG
chr3	111518932	111518933	chr3:111518933:A:C	rs17202754	A	C	A	SOX2_HMG_3	-3	0	-	0	0	.
chr3	111546578	111546579	chr3:111546579:T:C	rs62273542	T	C	T	SOX2_HMG_3	-17	0	+	0	0	.
chr3	111696107	111696108	chr3:111696108:G:A	rs73214109	G	A	G	SOX2_HMG_3	21	0	+	0	0	.
chr3	111767704	111767705	chr3:111767705:T:C	rs9850851	T	C	T	SOX2_HMG_3	4	1	-	4.806841218166575	-2.1019135611486446	GAACAATGACAGTTATA
chr3	111768555	111768556	chr3:111768556:A:G	rs78339152	A	G	A	SOX2_HMG_3	-10	0	-	0	0	.
chr3	111851282	111851283	chr3:111851283:A:C	rs1282975	A	C	C	SOX2_HMG_3	-14	0	-	0	0	.
chr3	112053234	112053235	chr3:112053235:C:T	rs10934132	C	T	T	SOX2_HMG_3	-9	0	-	0	0	.
chr3	112333985	112333986	chr3:112333986:G:A	rs73856005	G	A	A	SOX2_HMG_3	33	0	+	0	0	.
chr3	112519494	112519495	chr3:112519495:T:C	rs77253692	T	C	T	SOX2_HMG_3	-18	0	-	0	0	.
chr3	112579478	112579479	chr3:112579479:C:T	rs80049720	C	T	C	SOX2_HMG_3	-10	0	+	0	0	.
chr3	112579497	112579498	chr3:112579498:A:G	rs1472107	A	G	G	SOX2_HMG_3	9	1	+	5.283843043776329	0.7030680146229596	CGCCAATGAAAGTGAGA
chr3	112633100	112633101	chr3:112633101:T:C	rs16859875	T	C	T	SOX2_HMG_3	34	0	+	0	0	.
chr3	112871492	112871493	chr3:112871493:G:A	rs6805959	G	A	G	SOX2_HMG_3	36	0	+	0	0	.
chr3	112871705	112871706	chr3:112871706:T:C	rs11714354	T	C	C	SOX2_HMG_3	2	1	+	7.889814280696283	2.886442210380696	TGTCAATGGTGGTGATG
chr3	113947172	113947173	chr3:113947173:G:C	rs3204024	G	C	G	SOX2_HMG_3	-7	0	-	0	0	.
chr3	114210631	114210632	chr3:114210632:T:C	rs59332094	T	C	t	SOX2_HMG_3	4	1	-	3.7739198044104905	-3.134834974904729	AGTCATTGCCATTGTGA
chr3	114719365	114719366	chr3:114719366:T:C	rs145799027	T	C	T	SOX2_HMG_3	11	1	+	4.3043862455901145	-2.3883052526422324	CCTCAATGATATGGACA
chr3	115239961	115239962	chr3:115239962:C:T	chr3:115239962:C:T	C	T	C	SOX2_HMG_3	-2	0	+	0	0	.
chr3	115863098	115863099	chr3:115863099:A:G	rs61391157	A	G	G	SOX2_HMG_3	20	0	+	0	0	.
chr3	116716804	116716805	chr3:116716805:C:A	rs1133335	C	A	C	SOX2_HMG_3	16	1	+	4.1297085650111836	5.855863443537456	AATGAATGCCAGTGTTC
chr3	116716805	116716806	chr3:116716806:G:A	rs80058968	G	A	G	SOX2_HMG_3	17	0	+	0	0	.
chr3	116741585	116741586	chr3:116741586:C:T	rs1368140	C	T	C	SOX2_HMG_3	16	1	-	4.1346558810048055	3.8609682646145345	GGTTAATTCAAGTGATG
chr3	117059123	117059124	chr3:117059124:T:C	rs11720922	T	C	T	SOX2_HMG_3	-6	0	+	0	0	.
chr3	117168576	117168577	chr3:117168577:C:T	rs9880688	C	T	T	SOX2_HMG_3	17	0	+	0	0	.
chr3	117228740	117228741	chr3:117228741:G:A	rs11923744	G	A	G	SOX2_HMG_3	35	0	+	0	0	.
chr3	117392787	117392788	chr3:117392788:T:C	rs1398629	T	C	T	SOX2_HMG_3	5	1	-	7.205647324072643	0.2968925447574231	GAGCAATGGGAGTGATG
chr3	117493866	117493867	chr3:117493867:C:T	rs140838468	C	T	C	SOX2_HMG_3	-7	0	+	0	0	.
chr3	117625152	117625153	chr3:117625153:G:A	rs4146331	G	A	A	SOX2_HMG_3	21	0	+	0	0	.
chr3	117651300	117651301	chr3:117651301:A:C	rs9875044	A	C	C	SOX2_HMG_3	3	1	-	4.568937203553858	4.568937203553858	AATTAATGCCATTGGAA
chr3	117688504	117688505	chr3:117688505:A:T	rs542588112	A	T	A	SOX2_HMG_3	-17	0	-	0	0	.
chr3	117872508	117872509	chr3:117872509:A:G	rs7622841	A	G	A	SOX2_HMG_3	-8	0	+	0	0	.
chr3	118973786	118973787	chr3:118973787:G:A	rs75371742	G	A	G	SOX2_HMG_3	8	1	+	5.708978502835182	4.859934555471552	AAGCAATGGCAGAGATG
chr3	119243895	119243896	chr3:119243896:T:G	rs58488777	T	G	T	SOX2_HMG_3	-9	0	-	0	0	.
chr3	119351669	119351670	chr3:119351670:T:C	rs56285588	T	C	T	SOX2_HMG_3	-13	0	+	0	0	.
chr3	119442602	119442603	chr3:119442603:C:T	rs112113709	C	T	C	SOX2_HMG_3	8	1	+	5.532891665866055	6.404628018501918	GCTAAATGCCATTGAGA
chr3	119677823	119677824	chr3:119677824:C:G	rs35943908	C	G	C	SOX2_HMG_3	21	0	-	0	0	.
chr3	119937290	119937291	chr3:119937291:T:C	rs77881395	T	C	T	SOX2_HMG_3	14	1	+	3.0373031180989987	-1.0822217426534007	CATGAATGGAATTGTGC
chr3	120192755	120192756	chr3:120192756:C:T	rs6764549	C	T	C	SOX2_HMG_3	0	1	-	3.1430120709523677	2.922417791867074	GATCAGTGCTGTTGAAG
chr3	120313899	120313900	chr3:120313900:C:T	rs191197813	C	T	C	SOX2_HMG_3	34	0	-	0	0	.
chr3	120390720	120390721	chr3:120390721:C:G	rs4676777	C	G	c	SOX2_HMG_3	24	0	-	0	0	.
chr3	120405885	120405886	chr3:120405886:A:G	rs4676778	A	G	G	SOX2_HMG_3	8	1	-	4.950553161755849	4.078816809119986	GGAAAATGTTATTGAAA
chr3	120435771	120435772	chr3:120435772:C:T	rs1733303	C	T	C	SOX2_HMG_3	8	1	-	2.9447411149880343	2.0956971676244054	TGTAAATGGCATTGTCG
chr3	120435795	120435796	chr3:120435796:A:G	rs6764364	A	G	A	SOX2_HMG_3	-16	0	-	0	0	.
chr3	120678245	120678246	chr3:120678246:A:C	rs3755563	A	C	A	SOX2_HMG_3	-8	0	+	0	0	.
chr3	120781217	120781218	chr3:120781218:C:T	rs17243695	C	T	c	SOX2_HMG_3	24	0	+	0	0	.
chr3	121225368	121225369	chr3:121225369:G:A	rs16832180	G	A	G	SOX2_HMG_3	24	0	+	0	0	.
chr3	121837371	121837372	chr3:121837372:C:T	rs9826473	C	T	C	SOX2_HMG_3	-6	0	+	0	0	.
chr3	122299982	122299983	chr3:122299983:A:G	rs74589404	A	G	A	SOX2_HMG_3	11	1	-	3.6052164870227235	-3.0874750112096234	TATGAATTCCATTGTAG
chr3	122392073	122392074	chr3:122392074:C:T	rs6438726	C	T	C	SOX2_HMG_3	3	1	+	3.6402894893491853	-3.2684652899660334	CATCGATGTCACTGATA
chr3	122589303	122589304	chr3:122589304:G:A	rs11714010	G	A	A	SOX2_HMG_3	33	0	-	0	0	.
chr3	122964165	122964166	chr3:122964166:A:C	rs57347971	A	C	A	SOX2_HMG_3	-3	0	-	0	0	.
chr3	122975679	122975680	chr3:122975680:A:G	rs895075	A	G	G	SOX2_HMG_3	26	0	+	0	0	.
chr3	123068665	123068666	chr3:123068666:A:T	rs7614797	A	T	A	SOX2_HMG_3	34	0	-	0	0	.
chr3	123069574	123069575	chr3:123069575:A:G	rs9815443	A	G	G	SOX2_HMG_3	10	1	+	3.1514589422398864	-3.757295837075333	GTTGAATTCTAGTGAGG
chr3	123149590	123149591	chr3:123149591:A:G	rs2717219	A	G	A	SOX2_HMG_3	6	1	-	4.52303649227729	-2.3857182870379297	GATAAATGTTATTGCTT
chr3	123203960	123203961	chr3:123203961:G:A	rs1515371	G	A	A	SOX2_HMG_3	0	1	+	4.334598464818697	4.114004185733403	GAACACTGCTAGTGAGG
chr3	123247336	123247337	chr3:123247337:T:C	rs13101217	T	C	C	SOX2_HMG_3	16	1	-	6.193981880900355	6.467669497290627	AGTCAAAGATAGTGAAA
chr3	123346127	123346128	chr3:123346128:C:G	rs55848018	C	G	C	SOX2_HMG_3	29	0	-	0	0	.
chr3	123471883	123471884	chr3:123471884:C:T	rs35000036	C	T	C	SOX2_HMG_3	29	0	-	0	0	.
chr3	123571368	123571369	chr3:123571369:T:C	rs771344513	T	C	T	SOX2_HMG_3	-7	0	-	0	0	.
chr3	123571375	123571376	chr3:123571376:A:G	rs80321176	A	G	A	SOX2_HMG_3	-14	0	-	0	0	.
chr3	123620707	123620708	chr3:123620708:C:T	rs565233007	C	T	C	SOX2_HMG_3	-17	0	+	0	0	.
chr3	123949738	123949739	chr3:123949739:C:A	rs7619302	C	A	C	SOX2_HMG_3	-6	0	-	0	0	.
chr3	124169630	124169631	chr3:124169631:G:T	rs4677919	G	T	T	SOX2_HMG_3	-3	0	+	0	0	.
chr3	124297151	124297152	chr3:124297152:A:G	rs13076923	A	G	G	SOX2_HMG_3	-15	0	+	0	0	.
chr3	124542785	124542786	chr3:124542786:C:T	rs78778376	C	T	C	SOX2_HMG_3	-13	0	-	0	0	.
chr3	124592488	124592489	chr3:124592489:T:C	rs13096370	T	C	T	SOX2_HMG_3	-17	0	+	0	0	.
chr3	124723533	124723534	chr3:124723534:A:T	rs73197605	A	T	A	SOX2_HMG_3	14	1	+	5.089996804058337	2.377222959244043	TAAGAATTTTATTGATA
chr3	124752249	124752250	chr3:124752250:T:A	rs56256730	T	A	T	SOX2_HMG_3	0	1	-	5.338017345232471	4.676215744557776	AGGCAATAGAAGTGAGG
chr3	125147914	125147915	chr3:125147915:T:C	rs28505072	T	C	T	SOX2_HMG_3	18	0	+	0	0	.
chr3	125247083	125247084	chr3:125247084:T:C	rs1850506	T	C	T	SOX2_HMG_3	23	0	+	0	0	.
chr3	125463096	125463097	chr3:125463097:A:G	rs7613952	A	G	G	SOX2_HMG_3	-8	0	+	0	0	.
chr3	126320341	126320342	chr3:126320342:C:A	rs78151629	C	A	C	SOX2_HMG_3	32	0	-	0	0	.
chr3	126320343	126320344	chr3:126320344:C:A	rs9854853	C	A	A	SOX2_HMG_3	30	0	-	0	0	.
chr3	126697904	126697905	chr3:126697905:C:T	rs73199869	C	T	C	SOX2_HMG_3	13	1	-	3.8296202451957244	-3.079134534119496	GGTCAATGTCATAGGAA
chr3	126967259	126967260	chr3:126967260:A:G	rs115827108	A	G	A	SOX2_HMG_3	5	1	+	6.14670432582308	-0.7620504534921411	CATCAATTGTGGTGAGG
chr3	127095003	127095004	chr3:127095004:C:T	rs62261964	C	T	C	SOX2_HMG_3	32	0	-	0	0	.
chr3	127104595	127104596	chr3:127104596:T:A	rs17701673	T	A	T	SOX2_HMG_3	1	1	-	6.480414482098418	3.4743706295751022	CATCAATGTTTGTGTTT
chr3	127129596	127129597	chr3:127129597:G:A	rs13316446	G	A	G	SOX2_HMG_3	8	1	+	9.205916563116965	8.356872615753336	ATTCAATGGCATTGGAA
chr3	127452950	127452951	chr3:127452951:C:G	rs6800029	C	G	G	SOX2_HMG_3	-5	0	+	0	0	.
chr3	127916253	127916254	chr3:127916254:T:C	rs1427540375	T	C	T	SOX2_HMG_3	-18	0	+	0	0	.
chr3	128053692	128053693	chr3:128053693:G:T	rs2335772	G	T	G	SOX2_HMG_3	-20	0	+	0	0	.
chr3	128076002	128076003	chr3:128076003:C:T	rs189492114	C	T	C	SOX2_HMG_3	22	0	-	0	0	.
chr3	128314204	128314205	chr3:128314205:G:A	rs11706908	G	A	A	SOX2_HMG_3	-3	0	+	0	0	.
chr3	128478428	128478429	chr3:128478429:C:T	rs12497619	C	T	C	SOX2_HMG_3	18	0	+	0	0	.
chr3	128722846	128722847	chr3:128722847:T:G	rs9842941	T	G	G	SOX2_HMG_3	4	1	-	4.856550765350591	-2.05220401396463	AATCAATTCCTGTGAGA
chr3	128795079	128795080	chr3:128795080:A:G	rs9834608	A	G	G	SOX2_HMG_3	16	1	-	7.314581431299057	6.117809378158704	GATCAATTGAATGGATT
chr3	128880266	128880267	chr3:128880267:C:G	rs73207996	C	G	C	SOX2_HMG_3	8	1	-	4.105013227705983	3.370744794934783	CCTCAATGGCAGGGAGA
chr3	128926195	128926196	chr3:128926196:G:C	rs1872545	G	C	C	SOX2_HMG_3	13	1	+	4.482511031877629	-2.4262437474375913	GCTCAACATTATTGAGA
chr3	129421745	129421746	chr3:129421746:G:A	rs58932597	G	A	g	SOX2_HMG_3	-19	0	+	0	0	.
chr3	129521851	129521852	chr3:129521852:A:G	rs544226162	A	G	A	SOX2_HMG_3	5	1	+	3.9554175953824195	-2.9533371839328018	AGTCAATCACAGTGACA
chr3	129563022	129563023	chr3:129563023:G:C	rs2713626	G	C	C	SOX2_HMG_3	-11	0	+	0	0	.
chr3	129566424	129566425	chr3:129566425:G:A	rs71333625	G	A	G	SOX2_HMG_3	-10	0	+	0	0	.
chr3	129651895	129651896	chr3:129651896:A:G	rs77017646	A	G	A	SOX2_HMG_3	11	1	+	6.025377157675907	11.300988686688305	GAGCAATGCCAATGATT
chr3	129795959	129795960	chr3:129795960:T:C	rs2811333	T	C	T	SOX2_HMG_3	-2	0	+	0	0	.
chr3	130109057	130109058	chr3:130109058:A:G	rs73210763	A	G	a	SOX2_HMG_3	5	1	+	4.081683248416065	-2.8270715308991567	ACTCAATGGTTTTGTTC
chr3	130360604	130360605	chr3:130360605:T:C	rs1453263	T	C	T	SOX2_HMG_3	14	1	-	6.597664484810755	2.4157868675096363	AATCAATGTCAGTAACA
chr3	131048162	131048163	chr3:131048163:G:A	rs116331827	G	A	G	SOX2_HMG_3	-16	0	-	0	0	.
chr3	131880442	131880443	chr3:131880443:T:C	rs6769415	T	C	T	SOX2_HMG_3	-3	0	+	0	0	.
chr3	132071740	132071741	chr3:132071741:C:T	rs11720820	C	T	T	SOX2_HMG_3	19	0	+	0	0	.
chr3	132136521	132136522	chr3:132136522:G:A	rs61793334	G	A	C	SOX2_HMG_3	15	1	-	2.088574309970733	4.93128346614759	GACCACTGTCAGTGACG
chr3	132655208	132655209	chr3:132655209:G:A	rs13096279	G	A	A	SOX2_HMG_3	13	1	+	1.6819724483453553	-5.226782330969865	GGTCTATGCCACTGATA
chr3	132658767	132658768	chr3:132658768:T:C	rs59426843	T	C	C	SOX2_HMG_3	9	1	+	8.713505821614103	7.906835687677057	TATAAATGCTAGTGATA
chr3	132964621	132964622	chr3:132964622:T:C	rs6770087	T	C	T	SOX2_HMG_3	-5	0	+	0	0	.
chr3	132984242	132984243	chr3:132984243:G:C	rs9867673	G	C	C	SOX2_HMG_3	-13	0	-	0	0	.
chr3	133015932	133015933	chr3:133015933:G:A	rs1464397	G	A	A	SOX2_HMG_3	9	1	-	6.865016417919284	7.671686551856331	AATCAAGTACATTGAAG
chr3	133125912	133125913	chr3:133125913:A:G	rs11710705	A	G	G	SOX2_HMG_3	36	0	-	0	0	.
chr3	133160274	133160275	chr3:133160275:A:G	rs112358350	A	G	A	SOX2_HMG_3	-6	0	+	0	0	.
chr3	133302105	133302106	chr3:133302106:A:G	rs16840202	A	G	A	SOX2_HMG_3	9	1	-	3.44543748877628	2.638767354839233	AGACAATGATAGTGGCA
chr3	133302123	133302124	chr3:133302124:A:T	rs4600815	A	T	A	SOX2_HMG_3	-9	0	-	0	0	.
chr3	133371261	133371262	chr3:133371262:C:T	rs1795101	C	T	C	SOX2_HMG_3	-8	0	-	0	0	.
chr3	133394773	133394774	chr3:133394774:T:C	chr3:133394774:T:C	T	C	T	SOX2_HMG_3	22	0	-	0	0	.
chr3	133480635	133480636	chr3:133480636:T:C	rs55635040	T	C	T	SOX2_HMG_3	-4	0	+	0	0	.
chr3	133536611	133536612	chr3:133536612:C:T	rs191780654	C	T	C	SOX2_HMG_3	21	0	+	0	0	.
chr3	133687496	133687497	chr3:133687497:T:G	rs7630957	T	G	T	SOX2_HMG_3	30	0	+	0	0	.
chr3	133868631	133868632	chr3:133868632:T:C	rs9845729	T	C	T	SOX2_HMG_3	-20	0	+	0	0	.
chr3	133894669	133894670	chr3:133894670:G:A	rs2692679	G	A	G	SOX2_HMG_3	22	0	-	0	0	.
chr3	133924157	133924158	chr3:133924158:T:C	rs9289459	T	C	T	SOX2_HMG_3	30	0	-	0	0	.
chr3	133976659	133976660	chr3:133976660:G:A	rs4854781	G	A	G	SOX2_HMG_3	29	0	-	0	0	.
chr3	134253006	134253007	chr3:134253007:A:C	rs145997461	A	C	A	SOX2_HMG_3	31	0	-	0	0	.
chr3	134361818	134361819	chr3:134361819:A:G	rs1077718	A	G	G	SOX2_HMG_3	-9	0	+	0	0	.
chr3	134382598	134382599	chr3:134382599:G:A	rs35304308	G	A	G	SOX2_HMG_3	34	0	-	0	0	.
chr3	134683263	134683264	chr3:134683264:C:A	rs10935124	C	A	C	SOX2_HMG_3	3	1	+	2.807642277274646	-4.101112502040573	AATCCATGATCTTGAAG
chr3	134980026	134980027	chr3:134980027:T:C	rs6776069	T	C	T	SOX2_HMG_3	-10	0	+	0	0	.
chr3	135090534	135090535	chr3:135090535:C:T	rs2030737	C	T	C	SOX2_HMG_3	23	0	-	0	0	.
chr3	135145686	135145687	chr3:135145687:G:A	rs3772647	G	A	A	SOX2_HMG_3	31	0	+	0	0	.
chr3	135216810	135216811	chr3:135216811:A:G	rs34744364	A	G	g	SOX2_HMG_3	1	1	+	5.228232908023869	3.3965853179445773	AATCATTTCCATTGTTA
chr3	135216830	135216831	chr3:135216831:T:C	rs28707535	T	C	c	SOX2_HMG_3	21	0	+	0	0	.
chr3	135216845	135216846	chr3:135216846:G:C	rs34243073	G	C	g	SOX2_HMG_3	36	0	+	0	0	.
chr3	135263266	135263267	chr3:135263267:G:A	rs34338595	G	A	A	SOX2_HMG_3	-12	0	+	0	0	.
chr3	135310552	135310553	chr3:135310553:T:G	rs115344190	T	G	T	SOX2_HMG_3	-2	0	+	0	0	.
chr3	135624811	135624812	chr3:135624812:G:A	rs1374769	G	A	G	SOX2_HMG_3	27	0	+	0	0	.
chr3	136151261	136151262	chr3:136151262:C:T	rs137871177	C	T	C	SOX2_HMG_3	-13	0	+	0	0	.
chr3	136336616	136336617	chr3:136336617:T:C	rs8045	T	C	T	SOX2_HMG_3	-9	0	-	0	0	.
chr3	136378733	136378734	chr3:136378734:T:C	rs655836	T	C	T	SOX2_HMG_3	21	0	-	0	0	.
chr3	136750642	136750643	chr3:136750643:G:C	rs77618353	G	C	G	SOX2_HMG_3	8	1	-	3.745866697082259	4.480135129853459	AATTAATTCAAGTGATC
chr3	136772960	136772961	chr3:136772961:A:G	rs114718496	A	G	A	SOX2_HMG_3	19	0	+	0	0	.
chr3	136933291	136933292	chr3:136933292:A:G	rs73231966	A	G	A	SOX2_HMG_3	5	1	+	12.23861814997481	5.329863370659588	TAACAATGGTATTGAGA
chr3	137032511	137032512	chr3:137032512:G:A	rs1009879791	G	A	G	SOX2_HMG_3	-19	0	+	0	0	.
chr3	137066954	137066955	chr3:137066955:G:A	rs1023765	G	A	A	SOX2_HMG_3	19	0	-	0	0	.
chr3	137081878	137081879	chr3:137081879:C:A	rs1351892	C	A	C	SOX2_HMG_3	13	1	-	2.6487301754768025	-4.260024603838418	AATCAATGCTTTAGAAA
chr3	138042240	138042241	chr3:138042241:T:G	rs139015678	T	G	T	SOX2_HMG_3	18	0	+	0	0	.
chr3	138561400	138561401	chr3:138561401:G:A	rs680070	G	A	A	SOX2_HMG_3	11	1	+	3.344404741623391	-1.931206787389007	CATCAATATCAGAGACA
chr3	138933430	138933431	chr3:138933431:G:T	rs12107433	G	T	T	SOX2_HMG_3	35	0	-	0	0	.
chr3	140288620	140288621	chr3:140288621:A:G	rs62268001	A	G	A	SOX2_HMG_3	5	1	+	9.173156773245784	2.2644019939305635	GATCAATTGTTTTGATT
chr3	140359646	140359647	chr3:140359647:G:A	rs9838521	G	A	G	SOX2_HMG_3	-19	0	-	0	0	.
chr3	140365946	140365947	chr3:140365947:T:G	rs3943277	T	G	T	SOX2_HMG_3	28	0	-	0	0	.
chr3	140442997	140442998	chr3:140442998:A:C	rs11712249	A	C	A	SOX2_HMG_3	-9	0	-	0	0	.
chr3	140522280	140522281	chr3:140522281:A:T	rs76755185	A	T	A	SOX2_HMG_3	6	1	-	4.028623626547164	-2.880131152768057	GAGGAATGAAAGTGATG
chr3	140534119	140534120	chr3:140534120:C:T	rs16850427	C	T	C	SOX2_HMG_3	22	0	-	0	0	.
chr3	140540594	140540595	chr3:140540595:C:T	rs349551	C	T	C	SOX2_HMG_3	33	0	+	0	0	.
chr3	140711190	140711191	chr3:140711191:C:T	rs6439941	C	T	C	SOX2_HMG_3	36	0	-	0	0	.
chr3	141274868	141274869	chr3:141274869:T:C	rs11715472	T	C	C	SOX2_HMG_3	18	0	+	0	0	.
chr3	141326101	141326102	chr3:141326102:C:T	rs73232970	C	T	C	SOX2_HMG_3	35	0	-	0	0	.
chr3	141424777	141424778	chr3:141424778:A:G	rs79197573	A	G	A	SOX2_HMG_3	32	0	-	0	0	.
chr3	141465355	141465356	chr3:141465356:T:C	rs75088737	T	C	T	SOX2_HMG_3	-6	0	+	0	0	.
chr3	141488255	141488256	chr3:141488256:G:T	chr3:141488256:G:T	G	T	G	SOX2_HMG_3	-13	0	-	0	0	.
chr3	141538797	141538798	chr3:141538798:A:G	rs114672208	A	G	A	SOX2_HMG_3	33	0	-	0	0	.
chr3	141710566	141710567	chr3:141710567:A:G	rs16851689	A	G	A	SOX2_HMG_3	-8	0	+	0	0	.
chr3	141715938	141715939	chr3:141715939:T:A	rs111515372	T	A	T	SOX2_HMG_3	15	1	+	7.231456760210106	5.996554323493384	TATTAATTTTATTGATC
chr3	141768632	141768633	chr3:141768633:C:T	rs61278509	C	T	C	SOX2_HMG_3	-14	0	-	0	0	.
chr3	142073588	142073589	chr3:142073589:G:A	rs73232677	G	A	g	SOX2_HMG_3	19	0	+	0	0	.
chr3	142115941	142115942	chr3:142115942:C:T	rs62284574	C	T	T	SOX2_HMG_3	3	1	+	8.036177401361423	1.1274226220462007	AGTCAATTATATTGTAC
chr3	142609305	142609306	chr3:142609306:T:G	rs1312395745	T	G	T	SOX2_HMG_3	25	0	+	0	0	.
chr3	142802779	142802780	chr3:142802780:C:T	rs45497994	C	T	C	SOX2_HMG_3	30	0	+	0	0	.
chr3	142896990	142896991	chr3:142896991:A:G	rs77195961	A	G	A	SOX2_HMG_3	24	0	-	0	0	.
chr3	142897032	142897033	chr3:142897033:G:C	rs73864501	G	C	G	SOX2_HMG_3	-18	0	-	0	0	.
chr3	143224182	143224183	chr3:143224183:A:G	rs6440154	A	G	G	SOX2_HMG_3	-13	0	-	0	0	.
chr3	143443816	143443817	chr3:143443817:T:C	rs55864696	T	C	C	SOX2_HMG_3	-11	0	+	0	0	.
chr3	143508459	143508460	chr3:143508460:G:A	rs79803693	G	A	G	SOX2_HMG_3	9	1	-	2.068109107642022	2.874779241579068	CAGCACTGGCAGTGACA
chr3	143736376	143736377	chr3:143736377:G:A	rs73154705	G	A	G	SOX2_HMG_3	-10	0	-	0	0	.
chr3	143825575	143825576	chr3:143825576:C:T	rs1823221	C	T	T	SOX2_HMG_3	-1	0	-	0	0	.
chr3	144037344	144037345	chr3:144037345:C:G	rs1025984	C	G	G	SOX2_HMG_3	32	0	-	0	0	.
chr3	144174033	144174034	chr3:144174034:G:A	rs6800503	G	A	G	SOX2_HMG_3	26	0	+	0	0	.
chr3	144263718	144263719	chr3:144263719:T:C	rs17670978	T	C	T	SOX2_HMG_3	-5	0	-	0	0	.
chr3	144385287	144385288	chr3:144385288:T:C	rs1725546	T	C	T	SOX2_HMG_3	-13	0	+	0	0	.
chr3	144407632	144407633	chr3:144407633:C:T	rs13059486	C	T	C	SOX2_HMG_3	-19	0	+	0	0	.
chr3	145002912	145002913	chr3:145002913:C:T	rs9875246	C	T	C	SOX2_HMG_3	3	1	+	7.835891219092645	0.9271364397774229	GATCAATGTCATGGTTT
chr3	145241965	145241966	chr3:145241966:T:C	rs1822907	T	C	T	SOX2_HMG_3	22	0	+	0	0	.
chr3	145269110	145269111	chr3:145269111:A:G	rs1445372	A	G	G	SOX2_HMG_3	24	0	+	0	0	.
chr3	145533820	145533821	chr3:145533821:G:A	chr3:145533821:G:A	G	A	G	SOX2_HMG_3	-3	0	+	0	0	.
chr3	145533841	145533842	chr3:145533842:C:T	rs56741139	C	T	C	SOX2_HMG_3	18	0	+	0	0	.
chr3	145558974	145558975	chr3:145558975:A:G	rs1632389	A	G	G	SOX2_HMG_3	23	0	-	0	0	.
chr3	145903539	145903540	chr3:145903540:T:C	rs6769191	T	C	T	SOX2_HMG_3	11	1	+	9.021364503165481	2.3286730049331332	AATCAAGTCTATTGATG
chr3	146094177	146094178	chr3:146094178:A:G	rs116539997	A	G	A	SOX2_HMG_3	20	0	-	0	0	.
chr3	146126175	146126176	chr3:146126176:C:T	rs76206503	C	T	C	SOX2_HMG_3	35	0	-	0	0	.
chr3	146126187	146126188	chr3:146126188:C:T	rs150976560	C	T	C	SOX2_HMG_3	23	0	-	0	0	.
chr3	146234930	146234931	chr3:146234931:T:C	rs9840954	T	C	T	SOX2_HMG_3	5	1	-	3.575769344136063	-3.3329854351791575	TTTCAATGTCAGTTAGT
chr3	146234936	146234937	chr3:146234937:T:C	rs182524644	T	C	T	SOX2_HMG_3	-1	0	-	0	0	.
chr3	146507009	146507010	chr3:146507010:C:T	rs9826856	C	T	C	SOX2_HMG_3	28	0	+	0	0	.
chr3	146507061	146507062	chr3:146507062:A:G	rs76838671	A	G	A	SOX2_HMG_3	12	1	-	11.223671925833914	4.3149171465186935	TAGCAATGTAATTGAAG
chr3	146559679	146559680	chr3:146559680:A:G	rs1876412	A	G	a	SOX2_HMG_3	20	0	+	0	0	.
chr3	146640392	146640393	chr3:146640393:G:A	rs73159127	G	A	G	SOX2_HMG_3	36	0	-	0	0	.
chr3	146640423	146640424	chr3:146640424:T:C	rs191248912	T	C	T	SOX2_HMG_3	5	1	-	8.457850302552604	1.5490955232373844	TGTCTATGATATTGATG
chr3	146646397	146646398	chr3:146646398:A:G	rs6799360	A	G	A	SOX2_HMG_3	-19	0	-	0	0	.
chr3	146681329	146681330	chr3:146681330:T:G	rs6804783	T	G	G	SOX2_HMG_3	33	0	-	0	0	.
chr3	146682088	146682089	chr3:146682089:T:C	rs17370212	T	C	T	SOX2_HMG_3	-7	0	+	0	0	.
chr3	146697306	146697307	chr3:146697307:A:T	rs76261152	A	T	A	SOX2_HMG_3	-13	0	+	0	0	.
chr3	146761155	146761156	chr3:146761156:A:G	rs1003264	A	G	A	SOX2_HMG_3	4	1	+	3.6821181930507816	-3.226636586264439	CATCATTGTAAGTGGTA
chr3	147416244	147416245	chr3:147416245:A:G	rs9833875	A	G	G	SOX2_HMG_3	31	0	-	0	0	.
chr3	147416251	147416252	chr3:147416252:A:G	rs12107172	A	G	A	SOX2_HMG_3	24	0	-	0	0	.
chr3	147937894	147937895	chr3:147937895:A:T	rs72999612	A	T	T	SOX2_HMG_3	28	0	+	0	0	.
chr3	148601180	148601181	chr3:148601181:T:C	rs114499406	T	C	T	SOX2_HMG_3	-18	0	-	0	0	.
chr3	148624774	148624775	chr3:148624775:T:G	rs275692	T	G	G	SOX2_HMG_3	-2	0	+	0	0	.
chr3	148756225	148756226	chr3:148756226:G:A	rs754650	G	A	G	SOX2_HMG_3	-5	0	-	0	0	.
chr3	148793009	148793010	chr3:148793010:C:T	rs6803439	C	T	C	SOX2_HMG_3	24	0	-	0	0	.
chr3	148968853	148968854	chr3:148968854:C:A	rs6764975	C	A	C	SOX2_HMG_3	-4	0	-	0	0	.
chr3	149027448	149027449	chr3:149027449:A:G	rs3347	A	G	A	SOX2_HMG_3	11	1	-	4.47007363782771	-2.222617860404637	GGTTAATGCTATTGGTT
chr3	149049328	149049329	chr3:149049329:C:T	rs12488819	C	T	C	SOX2_HMG_3	-15	0	+	0	0	.
chr3	149324229	149324230	chr3:149324230:G:A	rs115360733	G	A	G	SOX2_HMG_3	32	0	+	0	0	.
chr3	149469216	149469217	chr3:149469217:C:T	rs11927441	C	T	C	SOX2_HMG_3	-9	0	-	0	0	.
chr3	149519343	149519344	chr3:149519344:C:T	rs77702584	C	T	C	SOX2_HMG_3	24	0	+	0	0	.
chr3	149540199	149540200	chr3:149540200:C:G	rs114457234	C	G	C	SOX2_HMG_3	13	1	-	9.497923180907815	2.5891684015925933	GAGCAATTGCATTGTTG
chr3	149559710	149559711	chr3:149559711:A:T	rs713371	A	T	T	SOX2_HMG_3	-20	0	+	0	0	.
chr3	149575528	149575529	chr3:149575529:T:C	rs16862007	T	C	T	SOX2_HMG_3	15	1	+	3.518072091365338	0.67536293518848	CATCATGGATATTGATG
chr3	149615759	149615760	chr3:149615760:G:A	rs7610908	G	A	G	SOX2_HMG_3	-8	0	+	0	0	.
chr3	149991118	149991119	chr3:149991119:C:T	rs3911491	C	T	C	SOX2_HMG_3	29	0	+	0	0	.
chr3	150105982	150105983	chr3:150105983:C:A	rs16862469	C	A	C	SOX2_HMG_3	13	1	-	3.6088475648178613	-3.299907214497359	CAGCAATGACAGTGCTT
chr3	150107108	150107109	chr3:150107109:G:A	rs116021924	G	A	G	SOX2_HMG_3	32	0	+	0	0	.
chr3	150142263	150142264	chr3:150142264:C:T	rs6786145	C	T	C	SOX2_HMG_3	26	0	+	0	0	.
chr3	150254049	150254050	chr3:150254050:A:G	rs6440661	A	G	a	SOX2_HMG_3	18	0	+	0	0	.
chr3	150326095	150326096	chr3:150326096:G:T	rs17270909	G	T	G	SOX2_HMG_3	30	0	-	0	0	.
chr3	150326113	150326114	chr3:150326114:A:C	rs34578019	A	C	C	SOX2_HMG_3	12	1	-	2.8851975582814093	-4.023557221033811	GTTCAATGGTAGTTTTC
chr3	150613948	150613949	chr3:150613949:A:G	rs796411626	A	G	A	SOX2_HMG_3	28	0	+	0	0	.
chr3	151171381	151171382	chr3:151171382:A:G	rs58593708	A	G	G	SOX2_HMG_3	22	0	-	0	0	.
chr3	151171397	151171398	chr3:151171398:A:G	rs75036711	A	G	A	SOX2_HMG_3	6	1	-	1.893208828340296	-5.015545950974921	TATCCATGTCCTTGAGG
chr3	151478871	151478872	chr3:151478872:T:C	rs4296566	T	C	T	SOX2_HMG_3	20	0	-	0	0	.
chr3	151596463	151596464	chr3:151596464:A:T	rs9858372	A	T	A	SOX2_HMG_3	28	0	+	0	0	.
chr3	151787767	151787768	chr3:151787768:T:C	rs6440785	T	C	-	SOX2_HMG_3	15	1	+	2.7516706715485477	-0.09103848462831032	TGTCAGTGTTAATGATG
chr3	151842079	151842080	chr3:151842080:C:G	chr3:151842080:C:G	C	G	C	SOX2_HMG_3	23	0	-	0	0	.
chr3	151842082	151842083	chr3:151842083:G:C	chr3:151842083:G:C	G	C	G	SOX2_HMG_3	20	0	-	0	0	.
chr3	151864799	151864800	chr3:151864800:G:C	rs140616383	G	C	G	SOX2_HMG_3	-20	0	-	0	0	.
chr3	151871287	151871288	chr3:151871288:G:A	rs73018426	G	A	G	SOX2_HMG_3	34	0	-	0	0	.
chr3	152121006	152121007	chr3:152121007:C:T	rs78806142	C	T	C	SOX2_HMG_3	28	0	-	0	0	.
chr3	152209104	152209105	chr3:152209105:C:G	rs323630	C	G	C	SOX2_HMG_3	16	1	-	6.928611683939863	4.928769189023319	GTTCAATGTCAGAGATG
chr3	152298671	152298672	chr3:152298672:G:T	rs17368404	G	T	G	SOX2_HMG_3	-2	0	+	0	0	.
chr3	152606320	152606321	chr3:152606321:T:G	rs2141601	T	G	T	SOX2_HMG_3	31	0	-	0	0	.
chr3	152606346	152606347	chr3:152606347:T:C	rs2141602	T	C	T	SOX2_HMG_3	5	1	-	5.049151281507693	-1.8596034978075278	CCTCAATGTTAGAGAGA
chr3	152657160	152657161	chr3:152657161:T:A	rs1878432	T	A	A	SOX2_HMG_3	-19	0	-	0	0	.
chr3	152745846	152745847	chr3:152745847:C:T	rs78962609	C	T	C	SOX2_HMG_3	-14	0	+	0	0	.
chr3	152745872	152745873	chr3:152745873:T:C	rs1461167	T	C	T	SOX2_HMG_3	12	1	+	3.018760900642961	-3.88999387867226	GGTCAATGCTAATGGGT
chr3	152965383	152965384	chr3:152965384:T:C	rs1916276	T	C	T	SOX2_HMG_3	-13	0	+	0	0	.
chr3	153094614	153094615	chr3:153094615:T:A	rs9877520	T	A	T	SOX2_HMG_3	-3	0	+	0	0	.
chr3	153131119	153131120	chr3:153131120:G:A	rs9865931	G	A	g	SOX2_HMG_3	-12	0	+	0	0	.
chr3	153296206	153296207	chr3:153296207:T:A	rs7641790	T	A	A	SOX2_HMG_3	34	0	+	0	0	.
chr3	153401059	153401060	chr3:153401060:G:A	rs4680059	G	A	A	SOX2_HMG_3	36	0	-	0	0	.
chr3	153624998	153624999	chr3:153624999:T:C	rs566925389	T	C	T	SOX2_HMG_3	14	1	+	5.761210587774155	1.6416857270217557	GTACAATTCTATTGTTT
chr3	153769075	153769076	chr3:153769076:A:T	rs73001073	A	T	A	SOX2_HMG_3	31	0	-	0	0	.
chr3	153784367	153784368	chr3:153784368:T:G	rs112020316	T	G	t	SOX2_HMG_3	-20	0	-	0	0	.
chr3	154023945	154023946	chr3:154023946:G:A	rs11717851	G	A	G	SOX2_HMG_3	-11	0	+	0	0	.
chr3	154241238	154241239	chr3:154241239:G:T	rs181443	G	T	G	SOX2_HMG_3	13	1	+	3.6391892827141024	-3.269565496601118	GACCAATGTTTTTGTTT
chr3	154288210	154288211	chr3:154288211:T:C	rs9854443	T	C	T	SOX2_HMG_3	5	1	-	4.036815238599072	-2.8719395407161508	ATTCAAATGTATTGTTG
chr3	154367210	154367211	chr3:154367211:T:C	rs187778160	T	C	T	SOX2_HMG_3	11	1	+	7.208204215113824	0.515512716881477	GATGAATAATATTGAAG
chr3	155447842	155447843	chr3:155447843:G:A	rs74804123	G	A	G	SOX2_HMG_3	13	1	+	4.01005422387323	-2.898700555441989	ATTCAGTGGAAGTGAAA
chr3	155753259	155753260	chr3:155753260:T:C	rs9818179	T	C	T	SOX2_HMG_3	4	1	-	9.001616035278532	2.092861255963312	TAGCAATGAAATTGAGT
chr3	156016763	156016764	chr3:156016764:T:G	rs7618886	T	G	G	SOX2_HMG_3	26	0	-	0	0	.
chr3	156216789	156216790	chr3:156216790:T:G	rs188443344	T	G	T	SOX2_HMG_3	0	1	+	3.4838150635039566	4.366210943263944	TCTCAAAGAAATTGAGA
chr3	156341458	156341459	chr3:156341459:C:A	rs142225903	C	A	C	SOX2_HMG_3	-1	0	-	0	0	.
chr3	156472308	156472309	chr3:156472309:C:T	rs564549000	C	T	C	SOX2_HMG_3	-16	0	-	0	0	.
chr3	156617881	156617882	chr3:156617882:G:C	rs59343105	G	C	G	SOX2_HMG_3	-12	0	+	0	0	.
chr3	156617923	156617924	chr3:156617924:T:C	rs2176618	T	C	T	SOX2_HMG_3	30	0	+	0	0	.
chr3	156796450	156796451	chr3:156796451:T:C	rs73019748	T	C	T	SOX2_HMG_3	30	0	+	0	0	.
chr3	157008076	157008077	chr3:157008077:C:T	rs1384541	C	T	T	SOX2_HMG_3	18	0	-	0	0	.
chr3	157076117	157076118	chr3:157076118:C:T	rs73170826	C	T	C	SOX2_HMG_3	-2	0	+	0	0	.
chr3	157099726	157099727	chr3:157099727:C:G	rs2306532	C	G	G	SOX2_HMG_3	1	1	-	6.237699891556465	5.063303629112441	TGTAAATGATAGTGATT
chr3	157104028	157104029	chr3:157104029:T:C	rs6805954	T	C	T	SOX2_HMG_3	34	0	-	0	0	.
chr3	157161022	157161023	chr3:157161023:G:A	rs879945711	G	A	G	SOX2_HMG_3	-14	0	+	0	0	.
chr3	157330554	157330555	chr3:157330555:C:T	rs12635316	C	T	C	SOX2_HMG_3	-12	0	-	0	0	.
chr3	157824513	157824514	chr3:157824514:A:G	rs6794184	A	G	A	SOX2_HMG_3	1	1	+	5.014950970893301	3.183303380814009	CATCAATTAAATTAAAA
chr3	158104879	158104880	chr3:158104880:T:C	rs1915940	T	C	T	SOX2_HMG_3	23	0	+	0	0	.
chr3	158741669	158741670	chr3:158741670:T:C	rs6788069	T	C	t	SOX2_HMG_3	17	0	-	0	0	.
chr3	159310898	159310899	chr3:159310899:C:T	rs2595253	C	T	C	SOX2_HMG_3	-13	0	-	0	0	.
chr3	159429919	159429920	chr3:159429920:A:G	rs75752598	A	G	A	SOX2_HMG_3	5	1	-	4.042544713991369	4.042544713991369	AATCATTGATATTCATG
chr3	159604453	159604454	chr3:159604454:C:T	rs111392488	C	T	C	SOX2_HMG_3	31	0	-	0	0	.
chr3	159650791	159650792	chr3:159650792:T:C	rs1978830	T	C	C	SOX2_HMG_3	-16	0	+	0	0	.
chr3	159945181	159945182	chr3:159945182:C:T	rs9818736	C	T	C	SOX2_HMG_3	7	1	-	5.032171902619636	2.303384782058303	AGTCAATGGCAGTATTG
chr3	160099407	160099408	chr3:160099408:A:G	rs73012068	A	G	G	SOX2_HMG_3	21	0	+	0	0	.
chr3	160343356	160343357	chr3:160343357:G:A	rs6441314	G	A	A	SOX2_HMG_3	-8	0	+	0	0	.
chr3	160434287	160434288	chr3:160434288:T:C	rs3773371	T	C	T	SOX2_HMG_3	9	1	+	3.821663566155095	3.014993432218048	TCTGAATTATAGTGATG
chr3	160477940	160477941	chr3:160477941:T:C	rs13314803	T	C	t	SOX2_HMG_3	2	1	+	3.370744794934783	-1.632627275380804	CCTGAATGCCAGTGAGA
chr3	160936592	160936593	chr3:160936593:T:C	rs73158217	T	C	C	SOX2_HMG_3	-6	0	-	0	0	.
chr3	160984027	160984028	chr3:160984028:G:A	rs6763532	G	A	A	SOX2_HMG_3	-14	0	+	0	0	.
chr3	160984077	160984078	chr3:160984078:A:G	rs12487156	A	G	A	SOX2_HMG_3	36	0	+	0	0	.
chr3	161057462	161057463	chr3:161057463:A:T	rs1037888	A	T	T	SOX2_HMG_3	5	1	+	4.4131902038427935	-2.4955645754724287	TGTCAACTTTATTGTTA
chr3	161291874	161291875	chr3:161291875:G:A	rs74462689	G	A	G	SOX2_HMG_3	-14	0	-	0	0	.
chr3	161338505	161338506	chr3:161338506:G:A	rs1036142192	G	A	G	SOX2_HMG_3	-14	0	-	0	0	.
chr3	161671024	161671025	chr3:161671025:C:T	rs1588908	C	T	T	SOX2_HMG_3	25	0	+	0	0	.
chr3	162029354	162029355	chr3:162029355:C:T	rs4856666	C	T	C	SOX2_HMG_3	20	0	+	0	0	.
chr3	162073610	162073611	chr3:162073611:T:C	rs12696134	T	C	C	SOX2_HMG_3	25	0	-	0	0	.
chr3	162073654	162073655	chr3:162073655:C:T	rs73018723	C	T	C	SOX2_HMG_3	-19	0	-	0	0	.
chr3	162100955	162100956	chr3:162100956:T:G	rs1397227	T	G	G	SOX2_HMG_3	28	0	-	0	0	.
chr3	162178409	162178410	chr3:162178410:G:A	rs9842355	G	A	A	SOX2_HMG_3	-14	0	-	0	0	.
chr3	162223074	162223075	chr3:162223075:G:A	rs9867096	G	A	G	SOX2_HMG_3	-5	0	-	0	0	.
chr3	162936635	162936636	chr3:162936636:A:G	rs3912608	A	G	A	SOX2_HMG_3	30	0	+	0	0	.
chr3	163180822	163180823	chr3:163180823:T:C	rs1873643	T	C	C	SOX2_HMG_3	25	0	-	0	0	.
chr3	164454599	164454600	chr3:164454600:A:G	rs35254047	A	G	A	SOX2_HMG_3	-8	0	-	0	0	.
chr3	165463758	165463759	chr3:165463759:T:C	rs73167338	T	C	T	SOX2_HMG_3	-16	0	-	0	0	.
chr3	166110086	166110087	chr3:166110087:C:G	rs4299439	C	G	G	SOX2_HMG_3	0	1	+	6.486204692036701	7.231271593748026	CGTCAATGCCAGAGATG
chr3	166223506	166223507	chr3:166223507:G:A	rs9863485	G	A	A	SOX2_HMG_3	35	0	-	0	0	.
chr3	166223536	166223537	chr3:166223537:T:C	rs34423841	T	C	T	SOX2_HMG_3	5	1	-	2.4512600503455566	-4.457494728969663	CCTCCATGCTAGTGAGC
chr3	166274336	166274337	chr3:166274337:A:T	rs6771920	A	T	T	SOX2_HMG_3	31	0	+	0	0	.
chr3	166943009	166943010	chr3:166943010:T:G	rs6780209	T	G	G	SOX2_HMG_3	-14	0	-	0	0	.
chr3	167067916	167067917	chr3:167067917:A:G	rs1464281	A	G	G	SOX2_HMG_3	26	0	+	0	0	.
chr3	167407858	167407859	chr3:167407859:G:A	rs9823090	G	A	G	SOX2_HMG_3	27	0	+	0	0	.
chr3	167651340	167651341	chr3:167651341:A:G	rs2420024	A	G	G	SOX2_HMG_3	-7	0	+	0	0	.
chr3	167750154	167750155	chr3:167750155:C:T	rs7631183	C	T	C	SOX2_HMG_3	-12	0	-	0	0	.
chr3	168211888	168211889	chr3:168211889:C:T	rs16851992	C	T	C	SOX2_HMG_3	33	0	-	0	0	.
chr3	168220099	168220100	chr3:168220100:G:T	rs7624807	G	T	T	SOX2_HMG_3	28	0	-	0	0	.
chr3	168801830	168801831	chr3:168801831:A:G	rs553801	A	G	A	SOX2_HMG_3	34	0	+	0	0	.
chr3	168802941	168802942	chr3:168802942:A:G	rs2421449	A	G	A	SOX2_HMG_3	25	0	+	0	0	.
chr3	168804003	168804004	chr3:168804004:T:G	rs526766	T	G	T	SOX2_HMG_3	24	0	+	0	0	.
chr3	168863702	168863703	chr3:168863703:A:G	rs7633280	A	G	A	SOX2_HMG_3	0	1	+	4.266899560234091	4.487493839319384	ACTCAATGCCATTTTTA
chr3	168877681	168877682	chr3:168877682:A:G	rs986738	A	G	A	SOX2_HMG_3	7	1	-	3.8912728227840367	-0.7968588839184008	CAGTAATTTCATTGATT
chr3	169613082	169613083	chr3:169613083:T:C	rs7619166	T	C	C	SOX2_HMG_3	23	0	-	0	0	.
chr3	169666412	169666413	chr3:169666413:T:C	rs116153715	T	C	t	SOX2_HMG_3	8	1	-	4.006863788333107	4.855907735696736	AACGAATGATATTGAGA
chr3	170181741	170181742	chr3:170181742:C:A	chr3:170181742:C:A	C	A	C	SOX2_HMG_3	1	1	-	3.6857117309200533	2.5113154684760293	AGCCCATGTTAGTGATG
chr3	170181756	170181757	chr3:170181757:C:G	rs200615284	C	G	C	SOX2_HMG_3	-14	0	-	0	0	.
chr3	170197164	170197165	chr3:170197165:T:G	rs1798239	T	G	G	SOX2_HMG_3	11	1	+	12.056033811869375	10.638953842649427	GCACAATGGTATTGATG
chr3	170492710	170492711	chr3:170492711:T:C	rs9875318	T	C	T	SOX2_HMG_3	30	0	+	0	0	.
chr3	170857762	170857763	chr3:170857763:C:T	rs60147413	C	T	c	SOX2_HMG_3	25	0	+	0	0	.
chr3	171191651	171191652	chr3:171191652:T:C	rs67023727	T	C	C	SOX2_HMG_3	29	0	-	0	0	.
chr3	171299433	171299434	chr3:171299434:A:C	rs11714004	A	C	C	SOX2_HMG_3	-3	0	+	0	0	.
chr3	171303966	171303967	chr3:171303967:A:G	rs2172394	A	G	A	SOX2_HMG_3	32	0	-	0	0	.
chr3	171561874	171561875	chr3:171561875:T:C	rs17419458	T	C	T	SOX2_HMG_3	12	1	+	3.453233580137729	-3.4555211991774915	GCTCTATGATATTGTTC
chr3	171705175	171705176	chr3:171705176:T:C	rs7632491	T	C	C	SOX2_HMG_3	31	0	+	0	0	.
chr3	171732357	171732358	chr3:171732358:T:C	rs1921345	T	C	T	SOX2_HMG_3	25	0	-	0	0	.
chr3	171732389	171732390	chr3:171732390:G:T	rs1921344	G	T	G	SOX2_HMG_3	-7	0	-	0	0	.
chr3	171834610	171834611	chr3:171834611:T:C	rs561937968	T	C	T	SOX2_HMG_3	-10	0	-	0	0	.
chr3	172085188	172085189	chr3:172085189:C:T	rs9841998	C	T	T	SOX2_HMG_3	25	0	+	0	0	.
chr3	172691439	172691440	chr3:172691440:T:G	rs77399448	T	G	G	SOX2_HMG_3	24	0	+	0	0	.
chr3	172949679	172949680	chr3:172949680:G:C	rs7632946	G	C	C	SOX2_HMG_3	-6	0	-	0	0	.
chr3	173275096	173275097	chr3:173275097:T:A	rs13065716	T	A	A	SOX2_HMG_3	-3	0	-	0	0	.
chr3	173456072	173456073	chr3:173456073:T:C	rs116580823	T	C	T	SOX2_HMG_3	21	0	-	0	0	.
chr3	173456091	173456092	chr3:173456092:C:T	rs78814525	C	T	C	SOX2_HMG_3	2	1	-	3.3676411586372166	3.3676411586372166	TAGCATTTGAATTGATG
chr3	173661812	173661813	chr3:173661813:A:G	rs1502483	A	G	G	SOX2_HMG_3	-6	0	-	0	0	.
chr3	173662169	173662170	chr3:173662170:T:A	rs4894451	T	A	T	SOX2_HMG_3	1	1	-	5.457303902868873	2.4512600503455566	CATCAATGCTTGTGAGC
chr3	173872304	173872305	chr3:173872305:T:C	rs1021302	T	C	T	SOX2_HMG_3	-4	0	+	0	0	.
chr3	174156594	174156595	chr3:174156595:G:A	rs1421428	G	A	G	SOX2_HMG_3	13	1	+	7.62269755340504	0.713942774089819	TATCAAAGGTATTGTTT
chr3	174216858	174216859	chr3:174216859:G:A	rs6764226	G	A	G	SOX2_HMG_3	-12	0	+	0	0	.
chr3	174404956	174404957	chr3:174404957:C:T	rs60437291	C	T	C	SOX2_HMG_3	29	0	+	0	0	.
chr3	174618957	174618958	chr3:174618958:C:T	rs541566	C	T	C	SOX2_HMG_3	-1	0	+	0	0	.
chr3	174618969	174618970	chr3:174618970:G:A	rs576894	G	A	A	SOX2_HMG_3	11	1	+	3.5990212456851296	-1.6765902833272686	TTTCAATGGTTGTGACA
chr3	174701093	174701094	chr3:174701094:G:C	rs9866752	G	C	G	SOX2_HMG_3	-6	0	+	0	0	.
chr3	174776482	174776483	chr3:174776483:A:G	rs146065168	A	G	A	SOX2_HMG_3	-4	0	-	0	0	.
chr3	174857517	174857518	chr3:174857518:C:A	rs62284943	C	A	C	SOX2_HMG_3	-18	0	-	0	0	.
chr3	175165855	175165856	chr3:175165856:C:T	rs34094961	C	T	C	SOX2_HMG_3	25	0	-	0	0	.
chr3	175194505	175194506	chr3:175194506:A:C	rs7632203	A	C	A	SOX2_HMG_3	25	0	+	0	0	.
chr3	175199209	175199210	chr3:175199210:C:A	rs9883893	C	A	A	SOX2_HMG_3	-6	0	-	0	0	.
chr3	175231752	175231753	chr3:175231753:C:A	rs35675620	C	A	A	SOX2_HMG_3	11	1	+	9.386737834473498	9.386737834473498	TGTCAATGTTACTGATA
chr3	175231765	175231766	chr3:175231766:A:G	rs6795681	A	G	A	SOX2_HMG_3	24	0	+	0	0	.
chr3	175288066	175288067	chr3:175288067:C:T	rs7650940	C	T	T	SOX2_HMG_3	31	0	+	0	0	.
chr3	175301807	175301808	chr3:175301808:T:A	rs12633108	T	A	T	SOX2_HMG_3	7	1	-	6.2141051573037025	6.898181773131501	CATCAAAATTATTGAGT
chr3	175411831	175411832	chr3:175411832:A:T	rs9879366	A	T	A	SOX2_HMG_3	26	0	+	0	0	.
chr3	175495740	175495741	chr3:175495741:T:A	rs2193844	T	A	T	SOX2_HMG_3	-18	0	-	0	0	.
chr3	175685789	175685790	chr3:175685790:G:A	rs150823927	G	A	G	SOX2_HMG_3	19	0	+	0	0	.
chr3	176403792	176403793	chr3:176403793:A:C	rs2626512	A	C	A	SOX2_HMG_3	21	0	-	0	0	.
chr3	176595472	176595473	chr3:176595473:T:C	rs9848490	T	C	T	SOX2_HMG_3	26	0	+	0	0	.
chr3	176976777	176976778	chr3:176976778:A:G	rs41333946	A	G	A	SOX2_HMG_3	2	1	-	2.8884328372832955	-2.1149392330322914	GATGAATGGCGGTGATG
chr3	177104887	177104888	chr3:177104888:T:G	rs1201289	T	G	G	SOX2_HMG_3	-14	0	+	0	0	.
chr3	177106287	177106288	chr3:177106288:A:C	rs62296570	A	C	A	SOX2_HMG_3	17	0	-	0	0	.
chr3	177193682	177193683	chr3:177193683:T:C	rs10936936	T	C	C	SOX2_HMG_3	-5	0	-	0	0	.
chr3	177346096	177346097	chr3:177346097:C:T	rs111838844	C	T	C	SOX2_HMG_3	1	1	-	3.2316254624440033	5.063273052523294	TGTCAATAACAGGGATA
chr3	177446631	177446632	chr3:177446632:C:T	rs188790085	C	T	C	SOX2_HMG_3	-3	0	-	0	0	.
chr3	177468839	177468840	chr3:177468840:T:C	rs1392218	T	C	T	SOX2_HMG_3	-6	0	+	0	0	.
chr3	177468860	177468861	chr3:177468861:G:C	rs1392217	G	C	G	SOX2_HMG_3	15	1	+	4.019772543016457	2.8444394051072224	CAACAAAGTAATTGAGG
chr3	177624679	177624680	chr3:177624680:T:C	rs1875102	T	C	C	SOX2_HMG_3	31	0	-	0	0	.
chr3	177773453	177773454	chr3:177773454:T:C	rs9829938	T	C	C	SOX2_HMG_3	-5	0	-	0	0	.
chr3	177816844	177816845	chr3:177816845:T:C	rs533362556	T	C	T	SOX2_HMG_3	10	1	-	3.6340194197700217	-3.2747353595451987	GTGCAATGCAATTGTCA
chr3	177852045	177852046	chr3:177852046:C:T	rs74732742	C	T	C	SOX2_HMG_3	29	0	-	0	0	.
chr3	178063902	178063903	chr3:178063903:T:C	rs75453969	T	C	T	SOX2_HMG_3	1	1	-	4.090459264946402	2.2588116748671085	TACTAATTGTATTGATG
chr3	178100857	178100858	chr3:178100858:T:A	rs12487093	T	A	A	SOX2_HMG_3	-7	0	+	0	0	.
chr3	178100863	178100864	chr3:178100864:C:T	rs62284022	C	T	C	SOX2_HMG_3	-1	0	+	0	0	.
chr3	178174360	178174361	chr3:178174361:T:C	rs75380256	T	C	T	SOX2_HMG_3	34	0	-	0	0	.
chr3	178387218	178387219	chr3:178387219:T:C	rs6804751	T	C	T	SOX2_HMG_3	31	0	+	0	0	.
chr3	178568475	178568476	chr3:178568476:A:G	rs16829780	A	G	A	SOX2_HMG_3	16	1	+	8.044164665725722	8.317852282115993	CATAAATGCCAGTGATA
chr3	179105474	179105475	chr3:179105475:A:G	rs12497857	A	G	A	SOX2_HMG_3	26	0	-	0	0	.
chr3	179651330	179651331	chr3:179651331:A:C	rs9826893	A	C	A	SOX2_HMG_3	-11	0	+	0	0	.
chr3	179658003	179658004	chr3:179658004:G:C	rs556868621	G	C	G	SOX2_HMG_3	-3	0	+	0	0	.
chr3	179921603	179921604	chr3:179921604:T:C	rs1056103	T	C	T	SOX2_HMG_3	24	0	+	0	0	.
chr3	181561095	181561096	chr3:181561096:A:C	rs140529710	A	C	A	SOX2_HMG_3	-7	0	-	0	0	.
chr3	182358858	182358859	chr3:182358859:A:G	rs16833062	A	G	A	SOX2_HMG_3	-16	0	-	0	0	.
chr3	182437273	182437274	chr3:182437274:A:G	rs17826722	A	G	A	SOX2_HMG_3	6	1	-	5.1634875389407195	-1.7452672403745015	CAACAATACTATTGGAA
chr3	182761193	182761194	chr3:182761194:C:T	chr3:182761194:C:T	C	T	C	SOX2_HMG_3	29	0	+	0	0	.
chr3	182803338	182803339	chr3:182803339:C:T	rs12696497	C	T	T	SOX2_HMG_3	1	1	-	4.931898942338252	6.763546532417543	TGTGAATGAAATTGAGG
chr3	182803354	182803355	chr3:182803355:G:T	rs12696498	G	T	G	SOX2_HMG_3	-15	0	-	0	0	.
chr3	183144346	183144347	chr3:183144347:A:G	rs79155994	A	G	A	SOX2_HMG_3	29	0	-	0	0	.
chr3	183386033	183386034	chr3:183386034:T:C	rs16857427	T	C	T	SOX2_HMG_3	-7	0	-	0	0	.
chr3	183580543	183580544	chr3:183580544:T:C	rs4066036	T	C	T	SOX2_HMG_3	-8	0	+	0	0	.
chr3	183883709	183883710	chr3:183883710:T:C	rs2056332	T	C	T	SOX2_HMG_3	29	0	+	0	0	.
chr3	184449794	184449795	chr3:184449795:C:T	rs12496289	C	T	C	SOX2_HMG_3	32	0	+	0	0	.
chr3	184464157	184464158	chr3:184464158:T:C	rs7433258	T	C	T	SOX2_HMG_3	5	1	+	2.3328597893561733	2.3328597893561733	GGTCATTGGGAGTGATG
chr3	185021337	185021338	chr3:185021338:G:A	rs4605520	G	A	G	SOX2_HMG_3	24	0	-	0	0	.
chr3	185046642	185046643	chr3:185046643:C:T	rs62289505	C	T	C	SOX2_HMG_3	22	0	-	0	0	.
chr3	185582606	185582607	chr3:185582607:G:A	rs7651346	G	A	G	SOX2_HMG_3	-7	0	+	0	0	.
chr3	185919951	185919952	chr3:185919952:T:C	rs16860329	T	C	T	SOX2_HMG_3	-9	0	-	0	0	.
chr3	186165492	186165493	chr3:186165493:A:C	rs62288978	A	C	A	SOX2_HMG_3	-20	0	-	0	0	.
chr3	186177129	186177130	chr3:186177130:C:T	rs2090394	C	T	C	SOX2_HMG_3	15	1	-	2.6455324511216642	3.078006032672565	TAACAAGGCCAGTGAGG
chr3	186697766	186697767	chr3:186697767:C:T	rs62292606	C	T	C	SOX2_HMG_3	27	0	-	0	0	.
chr3	186743368	186743369	chr3:186743369:T:C	rs5030094	T	C	T	SOX2_HMG_3	5	1	-	3.382998608248003	-3.5257561710672176	AATCAATGGTCTTCAAA
chr3	186743391	186743392	chr3:186743392:T:C	rs2062632	T	C	t	SOX2_HMG_3	-18	0	-	0	0	.
chr3	186786351	186786352	chr3:186786352:T:G	rs539100607	T	G	.	SOX2_HMG_3	-1	0	-	0	0	.
chr3	186786358	186786359	chr3:186786359:T:C	rs266718	T	C	.	SOX2_HMG_3	-8	0	-	0	0	.
chr3	186840082	186840083	chr3:186840083:A:G	rs76071583	A	G	A	SOX2_HMG_3	11	1	-	3.6591442898180633	-3.0335472084142845	AGTCAGTGACATTGTGA
chr3	186860684	186860685	chr3:186860685:C:T	rs7639352	C	T	C	SOX2_HMG_3	-1	0	-	0	0	.
chr3	186964929	186964930	chr3:186964930:G:A	rs57914650	G	A	G	SOX2_HMG_3	7	1	+	5.734580547482016	3.0057934269206807	AATAAATGAAAGTGAGA
chr3	186966504	186966505	chr3:186966505:C:G	rs3864107	C	G	C	SOX2_HMG_3	34	0	+	0	0	.
chr3	186982451	186982452	chr3:186982452:T:G	rs4686826	T	G	G	SOX2_HMG_3	-17	0	+	0	0	.
chr3	187475459	187475460	chr3:187475460:C:T	rs78012014	C	T	C	SOX2_HMG_3	-3	0	+	0	0	.
chr3	187507729	187507730	chr3:187507730:C:T	rs7631523	C	T	T	SOX2_HMG_3	3	1	+	8.703066428901613	1.7943116495863933	AATCAACGTTATTGAAC
chr3	187839702	187839703	chr3:187839703:T:C	rs59161098	T	C	T	SOX2_HMG_3	12	1	+	3.6497785119044783	-3.258976267410742	GGTCACTGATATTGGAA
chr3	187850404	187850405	chr3:187850405:G:A	rs6791207	G	A	G	SOX2_HMG_3	8	1	-	7.473955300523951	8.345691653159813	GCTCAATGCCATGGATG
chr3	187878955	187878956	chr3:187878956:G:T	rs6788294	G	T	T	SOX2_HMG_3	19	0	-	0	0	.
chr3	187887526	187887527	chr3:187887527:C:T	rs6444265	C	T	T	SOX2_HMG_3	-4	0	+	0	0	.
chr3	187900351	187900352	chr3:187900352:T:C	rs546343	T	C	C	SOX2_HMG_3	33	0	+	0	0	.
chr3	187906121	187906122	chr3:187906122:A:G	rs9832302	A	G	A	SOX2_HMG_3	6	1	-	6.014775545335301	-0.8939792339799213	AATCCATGACAGTGTTG
chr3	187978183	187978184	chr3:187978184:C:T	rs55776085	C	T	C	SOX2_HMG_3	8	1	-	1.891046200671542	1.0420022533079136	CATCCATCGTAGTGAAG
chr3	188155120	188155121	chr3:188155121:A:G	rs76444825	A	G	A	SOX2_HMG_3	-14	0	+	0	0	.
chr3	188184745	188184746	chr3:188184746:A:G	rs73190759	A	G	A	SOX2_HMG_3	-2	0	+	0	0	.
chr3	188331446	188331447	chr3:188331447:C:T	rs12490095	C	T	T	SOX2_HMG_3	24	0	-	0	0	.
chr3	188341654	188341655	chr3:188341655:A:G	rs13076750	A	G	G	SOX2_HMG_3	15	1	-	5.643774221576418	2.8010650653995603	CTGCAATGCTAGTGTTT
chr3	188444872	188444873	chr3:188444873:A:C	rs9290872	A	C	C	SOX2_HMG_3	31	0	-	0	0	.
chr3	188707513	188707514	chr3:188707514:A:G	rs78983178	A	G	A	SOX2_HMG_3	5	1	+	5.142909500274857	-1.765845279040363	TGTCAATGCTACTGACT
chr3	188707517	188707518	chr3:188707518:T:C	rs1409546222	T	C	T	SOX2_HMG_3	9	1	+	5.142909500274857	4.336239366337812	TGTCAATGCTACTGACT
chr3	188719878	188719879	chr3:188719879:T:C	rs145155147	T	C	T	SOX2_HMG_3	24	0	+	0	0	.
chr3	188826622	188826623	chr3:188826623:G:C	rs9867093	G	C	C	SOX2_HMG_3	-3	0	-	0	0	.
chr3	188889281	188889282	chr3:188889282:C:T	rs76971802	C	T	C	SOX2_HMG_3	32	0	+	0	0	.
chr3	188911560	188911561	chr3:188911561:G:C	rs188496785	G	C	G	SOX2_HMG_3	-14	0	+	0	0	.
chr3	189205579	189205580	chr3:189205580:A:G	rs6783147	A	G	G	SOX2_HMG_3	18	0	-	0	0	.
chr3	189334757	189334758	chr3:189334758:C:T	rs78307847	C	T	C	SOX2_HMG_3	-12	0	+	0	0	.
chr3	189364688	189364689	chr3:189364689:T:C	rs13068281	T	C	T	SOX2_HMG_3	9	1	+	4.360119512294798	3.5534493783577528	GGTCAATGGTATTTTCA
chr3	189393645	189393646	chr3:189393646:C:A	rs150647469	C	A	C	SOX2_HMG_3	18	0	+	0	0	.
chr3	189512414	189512415	chr3:189512415:A:G	rs1364593	A	G	G	SOX2_HMG_3	2	1	+	7.0524538356569195	7.0524538356569195	GAACAATGCAATTGGAG
chr3	189562847	189562848	chr3:189562848:G:A	rs9859170	G	A	A	SOX2_HMG_3	-11	0	-	0	0	.
chr3	189861721	189861722	chr3:189861722:G:A	rs17448036	G	A	A	SOX2_HMG_3	2	1	+	5.40855074213392	5.40855074213392	AAGCATTGTAATTGATT
chr3	189867100	189867101	chr3:189867101:G:A	rs6807129	G	A	A	SOX2_HMG_3	-18	0	+	0	0	.
chr3	190807726	190807727	chr3:190807727:A:G	rs9870207	A	G	G	SOX2_HMG_3	-4	0	-	0	0	.
chr3	191085264	191085265	chr3:191085265:G:A	rs185639314	G	A	G	SOX2_HMG_3	7	1	+	3.087503989373681	0.3587168688123461	CATAAAAGTTAGTGATG
chr3	191775685	191775686	chr3:191775686:G:A	rs9860020	G	A	G	SOX2_HMG_3	-2	0	-	0	0	.
chr3	192057263	192057264	chr3:192057264:C:G	rs80063195	C	G	C	SOX2_HMG_3	28	0	-	0	0	.
chr3	192364292	192364293	chr3:192364293:T:C	rs1574091	T	C	T	SOX2_HMG_3	31	0	+	0	0	.
chr3	192449188	192449189	chr3:192449189:C:T	rs141499968	C	T	C	SOX2_HMG_3	-10	0	-	0	0	.
chr3	192697756	192697757	chr3:192697757:A:T	rs1394834	A	T	a	SOX2_HMG_3	-16	0	-	0	0	.
chr3	192797767	192797768	chr3:192797768:G:A	rs1061860	G	A	G	SOX2_HMG_3	33	0	-	0	0	.
chr3	192827410	192827411	chr3:192827411:G:A	rs138476913	G	A	G	SOX2_HMG_3	-5	0	+	0	0	.
chr3	192827412	192827413	chr3:192827413:C:T	rs7626121	C	T	C	SOX2_HMG_3	-3	0	+	0	0	.
chr3	193050026	193050027	chr3:193050027:G:A	rs77385366	G	A	G	SOX2_HMG_3	20	0	+	0	0	.
chr3	193320906	193320907	chr3:193320907:T:G	rs6444703	T	G	G	SOX2_HMG_3	30	0	-	0	0	.
chr3	193401108	193401109	chr3:193401109:G:T	rs62285691	G	T	G	SOX2_HMG_3	-14	0	+	0	0	.
chr3	193701835	193701836	chr3:193701836:C:T	rs73069792	C	T	C	SOX2_HMG_3	18	0	-	0	0	.
chr3	193712336	193712337	chr3:193712337:A:G	chr3:193712337:A:G	A	G	A	SOX2_HMG_3	5	1	+	2.5241034269648264	-4.384651352350392	AGGCGATGCTATTGACG
chr3	193743616	193743617	chr3:193743617:C:G	rs78264903	C	G	C	SOX2_HMG_3	-20	0	+	0	0	.
chr3	193762770	193762771	chr3:193762771:T:C	rs11928384	T	C	C	SOX2_HMG_3	-2	0	+	0	0	.
chr3	193794713	193794714	chr3:193794714:A:G	rs472356	A	G	G	SOX2_HMG_3	-10	0	+	0	0	.
chr3	193794758	193794759	chr3:193794759:A:G	rs472450	A	G	A	SOX2_HMG_3	35	0	+	0	0	.
chr3	193865502	193865503	chr3:193865503:T:C	rs115293330	T	C	T	SOX2_HMG_3	5	1	-	9.97839319961443	3.069638420299212	TTTCAATGGTAGTGACT
chr3	193932301	193932302	chr3:193932302:C:T	rs12485924	C	T	C	SOX2_HMG_3	3	1	+	4.536053021073414	-2.372701758241808	GATCAATGACATAGTCA
chr3	194246507	194246508	chr3:194246508:C:G	rs891571966	C	G	C	SOX2_HMG_3	0	1	-	6.260608089338074	5.515541187626752	GAACAATGCTATTGCAG
chr3	194307378	194307379	chr3:194307379:T:C	rs779090930	T	C	T	SOX2_HMG_3	-14	0	+	0	0	.
chr3	194383441	194383442	chr3:194383442:G:A	rs114068214	G	A	G	SOX2_HMG_3	-16	0	+	0	0	.
chr3	194383492	194383493	chr3:194383493:A:C	rs35639299	A	C	A	SOX2_HMG_3	35	0	+	0	0	.
chr3	194572027	194572028	chr3:194572028:T:C	rs7611488	T	C	C	SOX2_HMG_3	36	0	-	0	0	.
chr3	194572033	194572034	chr3:194572034:C:G	rs7648517	C	G	G	SOX2_HMG_3	30	0	-	0	0	.
chr3	194723856	194723857	chr3:194723857:A:C	rs12330748	A	C	A	SOX2_HMG_3	32	0	-	0	0	.
chr3	194723866	194723867	chr3:194723867:G:T	rs59552148	G	T	G	SOX2_HMG_3	22	0	-	0	0	.
chr3	194723867	194723868	chr3:194723868:C:T	rs57512099	C	T	C	SOX2_HMG_3	21	0	-	0	0	.
chr3	194741278	194741279	chr3:194741279:G:A	rs115501410	G	A	g	SOX2_HMG_3	-1	0	+	0	0	.
chr3	194767189	194767190	chr3:194767190:T:A	rs9857633	T	A	T	SOX2_HMG_3	4	1	-	3.158143264004462	-3.750611515310758	CAGCAAGGCTATTGTTT
chr3	194797799	194797800	chr3:194797800:A:G	rs111270445	A	G	A	SOX2_HMG_3	5	1	+	5.284095971760511	-1.62465880755471	GAGCAATATCATTGTGC
chr3	194887325	194887326	chr3:194887326:G:A	rs11720362	G	A	A	SOX2_HMG_3	32	0	-	0	0	.
chr3	194935302	194935303	chr3:194935303:G:A	rs114512143	G	A	G	SOX2_HMG_3	31	0	-	0	0	.
chr3	194935353	194935354	chr3:194935354:C:T	rs76127851	C	T	C	SOX2_HMG_3	-20	0	-	0	0	.
chr3	195042871	195042872	chr3:195042872:A:G	rs2676889	A	G	G	SOX2_HMG_3	19	0	-	0	0	.
chr3	195068211	195068212	chr3:195068212:A:G	rs79640414	A	G	A	SOX2_HMG_3	2	1	-	8.471648130345764	3.468276060030176	ACTCAATGCCATTGGAA
chr3	195098241	195098242	chr3:195098242:T:A	rs56371459	T	A	T	SOX2_HMG_3	12	1	+	5.196545306788973	-1.7122094725262471	AATTAATGCCAGTGACT
chr3	195242464	195242465	chr3:195242465:T:C	rs544503982	T	C	T	SOX2_HMG_3	-11	0	+	0	0	.
chr3	195337963	195337964	chr3:195337964:T:C	rs113179685	T	C	C	SOX2_HMG_3	30	0	-	0	0	.
chr3	195446505	195446506	chr3:195446506:C:T	rs78575501	C	T	C	SOX2_HMG_3	29	0	+	0	0	.
chr3	195465367	195465368	chr3:195465368:G:A	rs567524137	G	A	G	SOX2_HMG_3	-15	0	+	0	0	.
chr3	195618956	195618957	chr3:195618957:A:G	rs2550229	A	G	g	SOX2_HMG_3	-3	0	-	0	0	.
chr3	195618957	195618958	chr3:195618958:G:A	rs147830733	G	A	a	SOX2_HMG_3	-4	0	-	0	0	.
chr3	195668765	195668766	chr3:195668766:C:G	rs9847909	C	G	-	SOX2_HMG_3	28	0	-	0	0	.
chr3	195700805	195700806	chr3:195700806:A:G	rs892318199	A	G	A	SOX2_HMG_3	-1	0	-	0	0	.
chr3	195725008	195725009	chr3:195725009:A:G	rs142096782	A	G	N	SOX2_HMG_3	-3	0	-	0	0	.
chr3	195725009	195725010	chr3:195725010:G:A	rs2550230	G	A	N	SOX2_HMG_3	-4	0	-	0	0	.
chr3	195730017	195730018	chr3:195730018:G:A	rs6795171	G	A	g	SOX2_HMG_3	-5	0	+	0	0	.
chr3	195757995	195757996	chr3:195757996:A:G	rs2641720	A	G	N	SOX2_HMG_3	-20	0	-	0	0	.
chr3	195903940	195903941	chr3:195903941:C:T	rs6784831	C	T	C	SOX2_HMG_3	15	1	+	8.683946668103088	11.526655824279947	AATCAATGGTATTTACA
chr3	196219295	196219296	chr3:196219296:C:T	rs4916519	C	T	C	SOX2_HMG_3	23	0	-	0	0	.
chr3	196278357	196278358	chr3:196278358:T:C	rs3772109	T	C	T	SOX2_HMG_3	-11	0	-	0	0	.
chr3	196501640	196501641	chr3:196501641:G:A	rs73219648	G	A	G	SOX2_HMG_3	-16	0	+	0	0	.
chr3	196508319	196508320	chr3:196508320:A:G	rs73891273	A	G	A	SOX2_HMG_3	6	1	-	11.28203352439645	4.373278745081231	CTTCAATGGAATTGAAT
chr3	196793178	196793179	chr3:196793179:C:T	rs79390411	C	T	T	SOX2_HMG_3	28	0	+	0	0	.
chr3	196893972	196893973	chr3:196893973:G:A	rs6798086	G	A	A	SOX2_HMG_3	29	0	-	0	0	.
chr3	196960016	196960017	chr3:196960017:C:T	rs73208209	C	T	C	SOX2_HMG_3	-13	0	-	0	0	.
chr3	197029012	197029013	chr3:197029013:G:T	rs536286734	G	T	G	SOX2_HMG_3	20	0	-	0	0	.
chr3	197202927	197202928	chr3:197202928:T:G	rs9839886	T	G	G	SOX2_HMG_3	-1	0	+	0	0	.
chr3	197270604	197270605	chr3:197270605:T:A	rs403751	T	A	T	SOX2_HMG_3	16	1	+	4.004966049791197	4.534348875177116	CCTCAAATGTAGTGATT
chr3	197485852	197485853	chr3:197485853:C:T	rs9824358	C	T	C	SOX2_HMG_3	0	1	+	5.522093196925932	5.384764218877268	CTTGAATGGCATTGAGA
chr3	197601624	197601625	chr3:197601625:G:C	rs73087503	G	C	.	SOX2_HMG_3	20	0	-	0	0	.
chr3	197808183	197808184	chr3:197808184:G:A	rs570303722	G	A	G	SOX2_HMG_3	22	0	+	0	0	.
chr3	197900155	197900156	chr3:197900156:G:A	rs9862060	G	A	G	SOX2_HMG_3	26	0	-	0	0	.
chr3	197900185	197900186	chr3:197900186:G:A	rs150688446	G	A	G	SOX2_HMG_3	-4	0	-	0	0	.
chr4	585579	585580	chr4:585580:T:C	rs35006826	T	C	T	SOX2_HMG_3	-13	0	+	0	0	.
chr4	1524352	1524353	chr4:1524353:T:G	rs371390997	T	G	-	SOX2_HMG_3	19	0	-	0	0	.
chr4	1524382	1524383	chr4:1524383:C:T	rs7671085	C	T	-	SOX2_HMG_3	-11	0	-	0	0	.
chr4	1524554	1524555	chr4:1524555:G:A	rs377403006	G	A	g	SOX2_HMG_3	3	1	-	11.883464849379202	4.974710070063981	AAACAATGCCAGTGATG
chr4	1979501	1979502	chr4:1979502:G:T	rs73202837	G	T	G	SOX2_HMG_3	-16	0	+	0	0	.
chr4	2268355	2268356	chr4:2268356:C:T	rs61789412	C	T	T	SOX2_HMG_3	33	0	+	0	0	.
chr4	2275911	2275912	chr4:2275912:A:G	rs4974667	A	G	A	SOX2_HMG_3	14	1	+	4.314778204702696	0.1329005874015763	CAGCAATGGAATGGAAG
chr4	2372012	2372013	chr4:2372013:G:T	rs762844	G	T	G	SOX2_HMG_3	26	0	+	0	0	.
chr4	2852617	2852618	chr4:2852618:C:G	rs112078927	C	G	C	SOX2_HMG_3	0	1	-	1.7012773428088528	0.956210441097529	GGTCAGTGACATTGCTG
chr4	2929462	2929463	chr4:2929463:C:T	rs4968	C	T	C	SOX2_HMG_3	19	0	-	0	0	.
chr4	3837729	3837730	chr4:3837730:G:A	rs4075005	G	A	G	SOX2_HMG_3	-10	0	-	0	0	.
chr4	3860112	3860113	chr4:3860113:G:A	rs34507541	G	A	G	SOX2_HMG_3	0	1	-	2.782861429170328	2.645532451121664	CAGCAATGCCAGGGAGG
chr4	3927139	3927140	chr4:3927140:C:A	rs116678517	C	A	-	SOX2_HMG_3	0	1	-	5.249650860304953	4.367254980544965	GATCTATGTTCTTGATG
chr4	4146740	4146741	chr4:4146741:G:A	rs41448044	G	A	-	SOX2_HMG_3	29	0	-	0	0	.
chr4	4259604	4259605	chr4:4259605:C:A	rs7673728	C	A	A	SOX2_HMG_3	13	1	-	2.1865129181133476	-4.722241861201873	GATCAAAGGTAGGGAAA
chr4	4284990	4284991	chr4:4284991:T:A	rs3775340	T	A	T	SOX2_HMG_3	12	1	+	7.395543165559692	0.4867883862444716	GATCACTGCCAGTGAGG
chr4	4296842	4296843	chr4:4296843:A:G	rs2980167	A	G	G	SOX2_HMG_3	35	0	+	0	0	.
chr4	4458689	4458690	chr4:4458690:C:T	rs190610247	C	T	C	SOX2_HMG_3	35	0	+	0	0	.
chr4	4594356	4594357	chr4:4594357:C:G	rs751263	C	G	C	SOX2_HMG_3	20	0	+	0	0	.
chr4	4694535	4694536	chr4:4694536:G:C	rs149993160	G	C	G	SOX2_HMG_3	-12	0	+	0	0	.
chr4	4990112	4990113	chr4:4990113:A:G	rs75292251	A	G	A	SOX2_HMG_3	12	1	-	4.1674137280195485	-2.7413410512956715	GTTCAAGGTTATTGGTT
chr4	5644092	5644093	chr4:5644093:T:A	rs62297514	T	A	T	SOX2_HMG_3	1	1	-	2.397945169241045	-0.6080986832822706	CATCAATGCTGTAGAAG
chr4	5654538	5654539	chr4:5654539:T:A	rs73198196	T	A	T	SOX2_HMG_3	-18	0	+	0	0	.
chr4	5947353	5947354	chr4:5947354:C:G	rs9683432	C	G	C	SOX2_HMG_3	8	1	-	1.9088014653797742	1.174533032608574	GGCCAAGGGCATTGAGT
chr4	6097975	6097976	chr4:6097976:A:T	rs1877764	A	T	A	SOX2_HMG_3	-7	0	-	0	0	.
chr4	6097976	6097977	chr4:6097977:A:T	rs1877763	A	T	A	SOX2_HMG_3	-8	0	-	0	0	.
chr4	6120407	6120408	chr4:6120408:C:T	rs7664611	C	T	C	SOX2_HMG_3	-7	0	+	0	0	.
chr4	6269315	6269316	chr4:6269316:A:T	rs4320200	A	T	A	SOX2_HMG_3	-12	0	-	0	0	.
chr4	6466091	6466092	chr4:6466092:T:C	rs55711322	T	C	C	SOX2_HMG_3	-3	0	-	0	0	.
chr4	6466093	6466094	chr4:6466094:T:G	rs34618602	T	G	G	SOX2_HMG_3	-5	0	-	0	0	.
chr4	6665307	6665308	chr4:6665308:T:A	rs6824405	T	A	A	SOX2_HMG_3	23	0	-	0	0	.
chr4	6688085	6688086	chr4:6688086:C:A	rs56077078	C	A	C	SOX2_HMG_3	23	0	-	0	0	.
chr4	6688124	6688125	chr4:6688125:C:T	rs115737237	C	T	C	SOX2_HMG_3	-16	0	-	0	0	.
chr4	6891899	6891900	chr4:6891900:A:G	rs4270587	A	G	A	SOX2_HMG_3	12	1	-	3.211677981812041	-3.6970767975031795	GATATATGTTATTGAAT
chr4	6891905	6891906	chr4:6891906:A:G	rs7438890	A	G	G	SOX2_HMG_3	6	1	-	3.211677981812041	-3.6970767975031804	GATATATGTTATTGAAT
chr4	6965514	6965515	chr4:6965515:A:G	rs6811552	A	G	G	SOX2_HMG_3	-17	0	-	0	0	.
chr4	6988841	6988842	chr4:6988842:C:G	rs66519732	C	G	C	SOX2_HMG_3	-12	0	-	0	0	.
chr4	7004623	7004624	chr4:7004624:C:G	rs80057871	C	G	C	SOX2_HMG_3	9	1	+	3.8417623644285714	-1.790917872734481	ACTAAATAGCAGTGATG
chr4	7342255	7342256	chr4:7342256:T:G	rs13115315	T	G	T	SOX2_HMG_3	33	0	+	0	0	.
chr4	7382332	7382333	chr4:7382333:G:A	rs180772761	G	A	G	SOX2_HMG_3	9	1	-	3.784360165238369	4.591030299175415	TATAAATACCAGTGAGG
chr4	7655679	7655680	chr4:7655680:A:C	rs144096524	A	C	A	SOX2_HMG_3	23	0	-	0	0	.
chr4	7705070	7705071	chr4:7705071:T:C	rs6446613	T	C	T	SOX2_HMG_3	0	1	+	3.9185683146500008	4.055897292698663	TGTCAATGTAATTAAGC
chr4	7705077	7705078	chr4:7705078:G:A	rs6849439	G	A	G	SOX2_HMG_3	7	1	+	3.9185683146500008	1.189781194088665	TGTCAATGTAATTAAGC
chr4	7758676	7758677	chr4:7758677:G:C	rs2285772	G	C	C	SOX2_HMG_3	-10	0	+	0	0	.
chr4	7841700	7841701	chr4:7841701:G:A	rs4689168	G	A	A	SOX2_HMG_3	24	0	-	0	0	.
chr4	7858573	7858574	chr4:7858574:A:G	rs62289318	A	G	A	SOX2_HMG_3	1	1	+	5.7204042008022	3.8887566107229095	AATTAATGGAATTGTAA
chr4	7949167	7949168	chr4:7949168:G:A	rs4385040	G	A	G	SOX2_HMG_3	24	0	-	0	0	.
chr4	7949191	7949192	chr4:7949192:C:A	rs4345163	C	A	C	SOX2_HMG_3	0	1	-	2.9481940985787833	2.065798218818796	GGTCAGTGAAAGTGACA
chr4	8147742	8147743	chr4:8147743:G:A	rs11734190	G	A	G	SOX2_HMG_3	16	1	-	6.282040967347387	7.478813020487741	GTTCAATGTCAGTGTCC
chr4	8393791	8393792	chr4:8393792:T:C	rs556070047	T	C	T	SOX2_HMG_3	-11	0	+	0	0	.
chr4	8393795	8393796	chr4:8393796:C:G	rs912520267	C	G	C	SOX2_HMG_3	-7	0	+	0	0	.
chr4	8780056	8780057	chr4:8780057:C:T	rs144433760	C	T	C	SOX2_HMG_3	26	0	-	0	0	.
chr4	8820962	8820963	chr4:8820963:C:T	rs148956907	C	T	C	SOX2_HMG_3	33	0	+	0	0	.
chr4	9151731	9151732	chr4:9151732:T:A	rs35796658	T	A	N	SOX2_HMG_3	10	1	-	3.969141482238751	-2.9396132970764697	GTTCAAAGTTATTGTGT
chr4	9155699	9155700	chr4:9155700:G:C	rs939450074	G	C	N	SOX2_HMG_3	16	1	-	4.081683248416065	6.081525743332609	ACTCAATGGTTTTGTTC
chr4	9238739	9238740	chr4:9238740:G:A	rs370014386	G	A	N	SOX2_HMG_3	21	0	-	0	0	.
chr4	9248233	9248234	chr4:9248234:C:G	rs565262301	C	G	N	SOX2_HMG_3	27	0	-	0	0	.
chr4	9611286	9611287	chr4:9611287:C:A	rs13131004	C	A	c	SOX2_HMG_3	2	1	-	3.063332648473804	6.930947483151845	GCGCAAAGATATTGAAG
chr4	9690877	9690878	chr4:9690878:C:T	rs6814274	C	T	t	SOX2_HMG_3	29	0	-	0	0	.
chr4	9914555	9914556	chr4:9914556:T:C	rs7674711	T	C	C	SOX2_HMG_3	-3	0	-	0	0	.
chr4	9927950	9927951	chr4:9927951:A:G	rs11936395	A	G	A	SOX2_HMG_3	-4	0	-	0	0	.
chr4	9930854	9930855	chr4:9930855:A:T	rs6449137	A	T	T	SOX2_HMG_3	-11	0	+	0	0	.
chr4	9930885	9930886	chr4:9930886:G:A	rs6837336	G	A	G	SOX2_HMG_3	20	0	+	0	0	.
chr4	9965166	9965167	chr4:9965167:T:C	rs7663097	T	C	C	SOX2_HMG_3	34	0	+	0	0	.
chr4	9965168	9965169	chr4:9965169:G:A	rs35110076	G	A	G	SOX2_HMG_3	36	0	+	0	0	.
chr4	10163736	10163737	chr4:10163737:G:A	rs4697943	G	A	a	SOX2_HMG_3	1	1	+	6.689241306319095	8.520888896398386	AGTCAATGTTGGTGATC
chr4	10174247	10174248	chr4:10174248:C:G	rs2903827	C	G	c	SOX2_HMG_3	-20	0	+	0	0	.
chr4	10242449	10242450	chr4:10242450:A:G	rs73222546	A	G	-	SOX2_HMG_3	5	1	+	3.161109233661034	-3.7476455456541875	ACTCAATGGTACTGGGG
chr4	10672155	10672156	chr4:10672156:C:G	chr4:10672156:C:G	C	G	C	SOX2_HMG_3	34	0	+	0	0	.
chr4	10722249	10722250	chr4:10722250:A:G	rs13137278	A	G	A	SOX2_HMG_3	-16	0	+	0	0	.
chr4	10965269	10965270	chr4:10965270:A:C	rs2869770	A	C	A	SOX2_HMG_3	33	0	+	0	0	.
chr4	10998532	10998533	chr4:10998533:A:G	rs4697827	A	G	a	SOX2_HMG_3	23	0	+	0	0	.
chr4	11471962	11471963	chr4:11471963:A:G	rs150033163	A	G	A	SOX2_HMG_3	10	1	+	2.974867575147438	-3.9338872041677826	AAAGAATGCCAGTGATC
chr4	11515099	11515100	chr4:11515100:A:G	rs9997161	A	G	G	SOX2_HMG_3	-12	0	+	0	0	.
chr4	11743626	11743627	chr4:11743627:A:G	rs1873714	A	G	A	SOX2_HMG_3	11	1	-	8.816365293089708	2.123673794857361	CACCAATGATATTGTTT
chr4	12884801	12884802	chr4:12884802:A:G	rs12642823	A	G	A	SOX2_HMG_3	-6	0	-	0	0	.
chr4	13459991	13459992	chr4:13459992:G:T	rs73231520	G	T	G	SOX2_HMG_3	-9	0	-	0	0	.
chr4	13590833	13590834	chr4:13590834:A:G	rs10939492	A	G	A	SOX2_HMG_3	5	1	+	5.059781896983177	-1.8489728823320444	TATCAATTCTACTGTTT
chr4	13897672	13897673	chr4:13897673:G:T	rs11726173	G	T	G	SOX2_HMG_3	13	1	+	4.690540306110826	-2.218214473204394	TATCTATGATAGTGGTG
chr4	14000568	14000569	chr4:14000569:A:G	rs563591415	A	G	A	SOX2_HMG_3	-1	0	+	0	0	.
chr4	14000579	14000580	chr4:14000580:A:C	rs78741583	A	C	A	SOX2_HMG_3	10	1	+	4.382002095881754	-2.526752683433465	GCTCAACATCATTGAAG
chr4	14410873	14410874	chr4:14410874:A:G	rs17481850	A	G	A	SOX2_HMG_3	-12	0	-	0	0	.
chr4	14632016	14632017	chr4:14632017:C:T	rs73797427	C	T	C	SOX2_HMG_3	22	0	-	0	0	.
chr4	14770427	14770428	chr4:14770428:T:C	rs73128642	T	C	T	SOX2_HMG_3	23	0	+	0	0	.
chr4	14877571	14877572	chr4:14877572:C:T	rs6848585	C	T	C	SOX2_HMG_3	16	1	-	8.489076393336514	8.215388776946243	AAGCAATTACAGTGAAG
chr4	14877585	14877586	chr4:14877586:C:T	rs41328848	C	T	C	SOX2_HMG_3	2	1	-	8.489076393336514	8.489076393336514	AAGCAATTACAGTGAAG
chr4	15149279	15149280	chr4:15149280:G:T	chr4:15149280:G:T	G	T	g	SOX2_HMG_3	-18	0	+	0	0	.
chr4	15229350	15229351	chr4:15229351:C:T	rs4432744	C	T	C	SOX2_HMG_3	23	0	+	0	0	.
chr4	15293973	15293974	chr4:15293974:G:T	rs9998611	G	T	G	SOX2_HMG_3	-11	0	+	0	0	.
chr4	15316296	15316297	chr4:15316297:A:G	rs75346824	A	G	A	SOX2_HMG_3	-6	0	-	0	0	.
chr4	15328161	15328162	chr4:15328162:T:C	rs4698359	T	C	C	SOX2_HMG_3	20	0	+	0	0	.
chr4	15614275	15614276	chr4:15614276:T:G	rs4393989	T	G	T	SOX2_HMG_3	22	0	+	0	0	.
chr4	15776840	15776841	chr4:15776841:T:C	rs112589006	T	C	T	SOX2_HMG_3	16	1	+	3.577240045523896	2.380467992383542	TAGCAATGACATGGAAT
chr4	15797583	15797584	chr4:15797584:C:T	rs6843266	C	T	C	SOX2_HMG_3	26	0	-	0	0	.
chr4	15848706	15848707	chr4:15848707:T:G	rs1803404	T	G	T	SOX2_HMG_3	-10	0	+	0	0	.
chr4	15894717	15894718	chr4:15894718:C:T	rs727488	C	T	T	SOX2_HMG_3	-16	0	+	0	0	.
chr4	15917481	15917482	chr4:15917482:C:T	rs10034192	C	T	C	SOX2_HMG_3	31	0	+	0	0	.
chr4	15933387	15933388	chr4:15933388:A:G	rs2531176	A	G	A	SOX2_HMG_3	4	1	+	8.324193958872328	1.4154391795571073	GACCAATGTCAGTGTTT
chr4	16005976	16005977	chr4:16005977:G:A	rs4466038	G	A	A	SOX2_HMG_3	28	0	+	0	0	.
chr4	16158110	16158111	chr4:16158111:C:T	rs10034143	C	T	.	SOX2_HMG_3	18	0	-	0	0	.
chr4	16323367	16323368	chr4:16323368:A:G	rs4586928	A	G	A	SOX2_HMG_3	-3	0	-	0	0	.
chr4	16838978	16838979	chr4:16838979:C:T	rs62298185	C	T	C	SOX2_HMG_3	25	0	+	0	0	.
chr4	18150382	18150383	chr4:18150383:C:A	rs76002472	C	A	C	SOX2_HMG_3	30	0	+	0	0	.
chr4	18390859	18390860	chr4:18390860:C:T	rs184397701	C	T	C	SOX2_HMG_3	33	0	-	0	0	.
chr4	18390893	18390894	chr4:18390894:T:A	rs6848900	T	A	T	SOX2_HMG_3	-1	0	-	0	0	.
chr4	19092401	19092402	chr4:19092402:C:G	rs207302	C	G	T	SOX2_HMG_3	-19	0	-	0	0	.
chr4	19227818	19227819	chr4:19227819:G:T	rs191018322	G	T	G	SOX2_HMG_3	28	0	+	0	0	.
chr4	19373942	19373943	chr4:19373943:C:T	rs34517311	C	T	C	SOX2_HMG_3	22	0	-	0	0	.
chr4	19542299	19542300	chr4:19542300:G:A	rs62298771	G	A	G	SOX2_HMG_3	-8	0	-	0	0	.
chr4	19984040	19984041	chr4:19984041:C:T	rs13115187	C	T	T	SOX2_HMG_3	-19	0	+	0	0	.
chr4	20194201	20194202	chr4:20194202:T:C	rs1158700027	T	C	T	SOX2_HMG_3	18	0	-	0	0	.
chr4	20194206	20194207	chr4:20194207:C:T	rs677198	C	T	T	SOX2_HMG_3	13	1	-	4.07889530500617	-2.829859474309051	AAGCAATATCAGTGTAC
chr4	20258404	20258405	chr4:20258405:T:G	rs2322459	T	G	G	SOX2_HMG_3	-15	0	+	0	0	.
chr4	20258414	20258415	chr4:20258415:G:A	rs2874800	G	A	G	SOX2_HMG_3	-5	0	+	0	0	.
chr4	20529357	20529358	chr4:20529358:G:A	rs2168801	G	A	G	SOX2_HMG_3	8	1	+	6.467856563541293	5.618812616177664	TAACAATGGTATTTATT
chr4	20543457	20543458	chr4:20543458:T:A	rs649424	T	A	A	SOX2_HMG_3	17	0	-	0	0	.
chr4	20543468	20543469	chr4:20543469:A:G	rs3775825	A	G	A	SOX2_HMG_3	6	1	-	4.808525448755472	-2.100229330559749	ACTCAATTGTATTCAGA
chr4	20754383	20754384	chr4:20754384:G:A	rs2291530	G	A	G	SOX2_HMG_3	13	1	+	6.916785679260887	0.008030899945665748	CATCAATGTTACTGTTC
chr4	21544593	21544594	chr4:21544594:C:T	rs870368	C	T	C	SOX2_HMG_3	-11	0	-	0	0	.
chr4	21703215	21703216	chr4:21703216:T:C	rs73256527	T	C	T	SOX2_HMG_3	6	1	+	3.6996943585860267	-3.2090604207291937	AACCAATGTTATTCAAC
chr4	21844609	21844610	chr4:21844610:C:G	rs41488744	C	G	C	SOX2_HMG_3	19	0	-	0	0	.
chr4	22090815	22090816	chr4:22090816:G:A	rs34780697	G	A	G	SOX2_HMG_3	32	0	-	0	0	.
chr4	22516826	22516827	chr4:22516827:G:C	rs73802854	G	C	G	SOX2_HMG_3	8	1	-	3.172110867596738	3.906379300367937	AATCAATTCTGTTGGGG
chr4	22609474	22609475	chr4:22609475:T:C	rs6838110	T	C	c	SOX2_HMG_3	24	0	-	0	0	.
chr4	22655705	22655706	chr4:22655706:G:A	rs77401428	G	A	G	SOX2_HMG_3	27	0	-	0	0	.
chr4	22815039	22815040	chr4:22815040:A:G	rs1485822	A	G	G	SOX2_HMG_3	31	0	-	0	0	.
chr4	23518906	23518907	chr4:23518907:C:T	rs216113	C	T	C	SOX2_HMG_3	32	0	+	0	0	.
chr4	23805437	23805438	chr4:23805438:T:G	rs28750249	T	G	T	SOX2_HMG_3	26	0	+	0	0	.
chr4	23819700	23819701	chr4:23819701:T:C	rs60276093	T	C	T	SOX2_HMG_3	11	1	+	7.584134098252866	0.8914426000205187	AATGAATGAAATTGAAA
chr4	24068200	24068201	chr4:24068201:A:T	rs56046693	A	T	A	SOX2_HMG_3	5	1	+	2.331810939012902	-4.57694384030232	AATCAATGCCACGGAAG
chr4	24274572	24274573	chr4:24274573:C:G	rs116869778	C	G	C	SOX2_HMG_3	-14	0	-	0	0	.
chr4	24328953	24328954	chr4:24328954:G:A	rs61793465	G	A	g	SOX2_HMG_3	6	1	-	5.921416088568744	12.830170867883965	GTTCAACGGAATTGAAG
chr4	24402432	24402433	chr4:24402433:G:A	rs59129277	G	A	G	SOX2_HMG_3	-12	0	-	0	0	.
chr4	24454038	24454039	chr4:24454039:G:A	rs13105131	G	A	G	SOX2_HMG_3	28	0	-	0	0	.
chr4	24552546	24552547	chr4:24552547:G:A	rs58666069	G	A	G	SOX2_HMG_3	15	1	+	4.413010851073359	4.845484432624261	ACTCAATTTCATGGAGG
chr4	24597454	24597455	chr4:24597455:G:A	rs1857898	G	A	G	SOX2_HMG_3	29	0	+	0	0	.
chr4	24857283	24857284	chr4:24857284:C:A	rs800475	C	A	A	SOX2_HMG_3	-3	0	+	0	0	.
chr4	24958124	24958125	chr4:24958125:T:A	rs7697533	T	A	T	SOX2_HMG_3	6	1	+	3.0026813951325475	-3.906073384182673	ACTCAATGGCATAGGTT
chr4	25079553	25079554	chr4:25079554:T:G	rs34076011	T	G	G	SOX2_HMG_3	29	0	-	0	0	.
chr4	25439890	25439891	chr4:25439891:T:C	rs6835627	T	C	T	SOX2_HMG_3	8	1	+	5.693179953383062	4.821443600747198	AATCAATATTATTATTT
chr4	25439899	25439900	chr4:25439900:A:G	rs6858330	A	G	A	SOX2_HMG_3	17	0	+	0	0	.
chr4	25639139	25639140	chr4:25639140:G:T	rs78738959	G	T	G	SOX2_HMG_3	11	1	-	3.7675543929255335	3.7675543929255335	GATCAATTCTACTGGAA
chr4	25770350	25770351	chr4:25770351:C:T	rs6448402	C	T	T	SOX2_HMG_3	26	0	-	0	0	.
chr4	25825379	25825380	chr4:25825380:C:T	rs540097809	C	T	C	SOX2_HMG_3	-17	0	-	0	0	.
chr4	25991750	25991751	chr4:25991751:C:A	rs6828245	C	A	G	SOX2_HMG_3	17	0	+	0	0	.
chr4	26076110	26076111	chr4:26076111:C:A	rs77336503	C	A	C	SOX2_HMG_3	26	0	-	0	0	.
chr4	26576374	26576375	chr4:26576375:G:T	rs76971433	G	T	T	SOX2_HMG_3	-19	0	+	0	0	.
chr4	26821375	26821376	chr4:26821376:A:G	rs6856464	A	G	C	SOX2_HMG_3	12	1	-	3.830694573248321	-3.0780602060668993	AAACAATGTTAATGGTA
chr4	26887029	26887030	chr4:26887030:G:A	rs80197589	G	A	G	SOX2_HMG_3	6	1	+	6.099969260659733	6.099969260659733	AATCAAGTTCATTGTTA
chr4	27094521	27094522	chr4:27094522:C:T	rs56043656	C	T	C	SOX2_HMG_3	8	1	-	4.30479180462563	3.455747857262001	GACCAATGGTATGGTTG
chr4	27190408	27190409	chr4:27190409:C:T	rs146227205	C	T	C	SOX2_HMG_3	0	1	+	1.944861595795504	1.8075326177468396	CGTCAATGGCACAGATG
chr4	27896952	27896953	chr4:27896953:C:G	rs10939179	C	G	C	SOX2_HMG_3	-5	0	+	0	0	.
chr4	29081848	29081849	chr4:29081849:T:C	rs4692380	T	C	T	SOX2_HMG_3	2	1	+	4.552953980077219	-0.4504180902383679	AATGAATTTCAGTGACA
chr4	29309428	29309429	chr4:29309429:C:T	rs1836781	C	T	C	SOX2_HMG_3	17	0	+	0	0	.
chr4	30463158	30463159	chr4:30463159:C:T	rs73216835	C	T	C	SOX2_HMG_3	35	0	+	0	0	.
chr4	30716710	30716711	chr4:30716711:A:G	rs9291546	A	G	G	SOX2_HMG_3	25	0	+	0	0	.
chr4	30803346	30803347	chr4:30803347:A:C	rs9654124	A	C	C	SOX2_HMG_3	4	1	+	8.665604969313911	1.7568501899986895	CATCAAAGTCATTGAGA
chr4	30840324	30840325	chr4:30840325:A:G	rs145573958	A	G	A	SOX2_HMG_3	-19	0	+	0	0	.
chr4	30840365	30840366	chr4:30840366:T:C	rs147735270	T	C	t	SOX2_HMG_3	22	0	+	0	0	.
chr4	30954726	30954727	chr4:30954727:A:T	rs4499665	A	T	A	SOX2_HMG_3	16	1	+	8.22634219822895	7.696959372843032	CATCAATGCCATTAAAA
chr4	31242562	31242563	chr4:31242563:C:A	rs144175144	C	A	C	SOX2_HMG_3	-19	0	+	0	0	.
chr4	31588808	31588809	chr4:31588809:G:A	rs7656200	G	A	A	SOX2_HMG_3	-13	0	+	0	0	.
chr4	31667835	31667836	chr4:31667836:T:C	rs73814120	T	C	T	SOX2_HMG_3	5	1	-	5.059845106414018	-1.8489096729012018	GAACAATGGAATTTAAG
chr4	31963879	31963880	chr4:31963880:C:T	rs1916298	C	T	T	SOX2_HMG_3	-3	0	+	0	0	.
chr4	31999886	31999887	chr4:31999887:C:T	rs12513173	C	T	C	SOX2_HMG_3	3	1	+	4.945988523042876	-1.9627662562723445	GGTCAATATTAGTAAAG
chr4	32022665	32022666	chr4:32022666:T:C	rs71598180	T	C	T	SOX2_HMG_3	18	0	+	0	0	.
chr4	32396984	32396985	chr4:32396985:G:A	rs1454310	G	A	G	SOX2_HMG_3	-13	0	-	0	0	.
chr4	32508281	32508282	chr4:32508282:A:G	rs1584155	A	G	A	SOX2_HMG_3	28	0	+	0	0	.
chr4	32991876	32991877	chr4:32991877:C:G	rs56338726	C	G	G	SOX2_HMG_3	-15	0	+	0	0	.
chr4	34858253	34858254	chr4:34858254:T:C	rs73228073	T	C	T	SOX2_HMG_3	35	0	+	0	0	.
chr4	35105066	35105067	chr4:35105067:T:C	rs6831661	T	C	c	SOX2_HMG_3	-13	0	+	0	0	.
chr4	35168345	35168346	chr4:35168346:A:C	rs13133684	A	C	A	SOX2_HMG_3	-8	0	+	0	0	.
chr4	35168370	35168371	chr4:35168371:A:G	rs114362182	A	G	A	SOX2_HMG_3	17	0	+	0	0	.
chr4	35713998	35713999	chr4:35713999:G:C	rs58785712	G	C	G	SOX2_HMG_3	27	0	+	0	0	.
chr4	36026873	36026874	chr4:36026874:G:C	rs6856512	G	C	G	SOX2_HMG_3	-19	0	-	0	0	.
chr4	37101018	37101019	chr4:37101019:C:T	rs7666915	C	T	T	SOX2_HMG_3	15	1	-	4.453815830656602	4.8862894122075025	AATCAATAGCAGTGCGT
chr4	37445251	37445252	chr4:37445252:C:T	rs76049455	C	T	C	SOX2_HMG_3	-8	0	-	0	0	.
chr4	37581653	37581654	chr4:37581654:C:T	rs6846773	C	T	C	SOX2_HMG_3	34	0	-	0	0	.
chr4	37852630	37852631	chr4:37852631:G:A	rs73808089	G	A	G	SOX2_HMG_3	-10	0	+	0	0	.
chr4	38165431	38165432	chr4:38165432:A:G	rs13139753	A	G	A	SOX2_HMG_3	14	1	+	3.4591263218766617	-0.7227512954244575	GAACAATGGCTGTGAGT
chr4	38223313	38223314	chr4:38223314:G:A	rs10032945	G	A	A	SOX2_HMG_3	33	0	-	0	0	.
chr4	38278645	38278646	chr4:38278646:G:A	rs4833028	G	A	G	SOX2_HMG_3	18	0	-	0	0	.
chr4	38677442	38677443	chr4:38677443:G:C	rs337615	G	C	C	SOX2_HMG_3	-5	0	+	0	0	.
chr4	38734102	38734103	chr4:38734103:A:G	rs111204003	A	G	G	SOX2_HMG_3	-17	0	+	0	0	.
chr4	38759599	38759600	chr4:38759600:A:C	rs111853087	A	C	A	SOX2_HMG_3	-12	0	-	0	0	.
chr4	39178796	39178797	chr4:39178797:T:G	rs1451821	T	G	T	SOX2_HMG_3	25	0	-	0	0	.
chr4	39364344	39364345	chr4:39364345:G:C	rs113380429	G	C	G	SOX2_HMG_3	16	1	+	4.528344605050378	2.528502110133835	AATCAATTTTAGTCTAG
chr4	40187704	40187705	chr4:40187705:T:C	rs12501987	T	C	T	SOX2_HMG_3	25	0	+	0	0	.
chr4	40237775	40237776	chr4:40237776:C:T	rs10019892	C	T	C	SOX2_HMG_3	-17	0	-	0	0	.
chr4	40245733	40245734	chr4:40245734:T:C	rs16995665	T	C	T	SOX2_HMG_3	-5	0	-	0	0	.
chr4	40608616	40608617	chr4:40608617:A:T	rs6847630	A	T	T	SOX2_HMG_3	33	0	+	0	0	.
chr4	40849031	40849032	chr4:40849032:T:C	rs4861068	T	C	T	SOX2_HMG_3	16	1	+	7.171051361480632	5.974279308340279	AATCAATATTCTTGAAT
chr4	40924026	40924027	chr4:40924027:C:T	rs756116586	C	T	T	SOX2_HMG_3	32	0	+	0	0	.
chr4	41207843	41207844	chr4:41207844:A:G	rs4590083	A	G	G	SOX2_HMG_3	6	1	-	3.026105606674472	-3.8826491726407477	GGTCCATGAAATTGGTA
chr4	41208804	41208805	chr4:41208805:A:C	rs13127574	A	C	A	SOX2_HMG_3	2	1	-	3.382998608248003	-0.48461622643003666	AATGAATGGTATAGAAA
chr4	41324766	41324767	chr4:41324767:G:T	rs1840101	G	T	T	SOX2_HMG_3	28	0	-	0	0	.
chr4	41468723	41468724	chr4:41468724:G:A	rs11944274	G	A	A	SOX2_HMG_3	-4	0	+	0	0	.
chr4	41579271	41579272	chr4:41579272:C:T	rs10021226	C	T	C	SOX2_HMG_3	32	0	-	0	0	.
chr4	42341794	42341795	chr4:42341795:G:A	rs56209012	G	A	G	SOX2_HMG_3	25	0	-	0	0	.
chr4	42401543	42401544	chr4:42401544:T:C	rs55934419	T	C	T	SOX2_HMG_3	-7	0	+	0	0	.
chr4	42401560	42401561	chr4:42401561:A:T	rs76362324	A	T	A	SOX2_HMG_3	10	1	+	2.7756047081002837	-4.133150071214937	GATCAGTGTCATGGAGG
chr4	42645446	42645447	chr4:42645447:G:C	rs2575454	G	C	C	SOX2_HMG_3	28	0	-	0	0	.
chr4	42704110	42704111	chr4:42704111:T:C	rs2612468	T	C	T	SOX2_HMG_3	5	1	-	3.7015135168174402	-3.20724126249778	CATCAATGTTGTAGATT
chr4	42949927	42949928	chr4:42949928:T:G	rs78251530	T	G	T	SOX2_HMG_3	19	0	-	0	0	.
chr4	44660735	44660736	chr4:44660736:G:A	rs4311345	G	A	G	SOX2_HMG_3	26	0	+	0	0	.
chr4	45151292	45151293	chr4:45151293:C:T	rs10222856	C	T	T	SOX2_HMG_3	28	0	-	0	0	.
chr4	46344639	46344640	chr4:46344640:A:G	rs10004122	A	G	A	SOX2_HMG_3	8	1	+	3.257675998826774	4.106719946190404	GATCAATGACAGAGGAA
chr4	46344661	46344662	chr4:46344662:A:G	rs189957	A	G	G	SOX2_HMG_3	30	0	+	0	0	.
chr4	46486082	46486083	chr4:46486083:A:G	rs4695160	A	G	A	SOX2_HMG_3	-7	0	+	0	0	.
chr4	46931996	46931997	chr4:46931997:T:G	rs12508654	T	G	T	SOX2_HMG_3	-8	0	+	0	0	.
chr4	47155236	47155237	chr4:47155237:T:C	rs10016226	T	C	T	SOX2_HMG_3	33	0	+	0	0	.
chr4	47427388	47427389	chr4:47427389:A:C	rs76065978	A	C	A	SOX2_HMG_3	16	1	-	11.186213172095876	11.989283613872066	GAGCAATGACAGTGATT
chr4	48042985	48042986	chr4:48042986:A:G	rs5005127	A	G	A	SOX2_HMG_3	5	1	+	4.534079795161349	-2.374674984153871	ATTCAATGCAATTCAGG
chr4	48493644	48493645	chr4:48493645:T:A	rs17472113	T	A	T	SOX2_HMG_3	14	1	-	7.341509183166494	4.628735338352199	GGTCAAGTGTATTGATT
chr4	49091726	49091727	chr4:49091727:G:C	rs111204118	G	C	.	SOX2_HMG_3	-8	0	-	0	0	.
chr4	49092225	49092226	chr4:49092226:G:C	rs80190502	G	C	.	SOX2_HMG_3	-8	0	-	0	0	.
chr4	49112334	49112335	chr4:49112335:T:A	chr4:49112335:T:A	T	A	.	SOX2_HMG_3	-17	0	-	0	0	.
chr4	49156313	49156314	chr4:49156314:T:A	rs62647855	T	A	.	SOX2_HMG_3	36	0	-	0	0	.
chr4	49510956	49510957	chr4:49510957:A:G	rs6599465	A	G	.	SOX2_HMG_3	17	0	+	0	0	.
chr4	49654166	49654167	chr4:49654167:G:A	rs61796181	G	A	.	SOX2_HMG_3	-19	0	+	0	0	.
chr4	49656395	49656396	chr4:49656396:A:G	rs56069993	A	G	.	SOX2_HMG_3	-18	0	+	0	0	.
chr4	49656408	49656409	chr4:49656409:C:A	rs377585738	C	A	.	SOX2_HMG_3	-5	0	+	0	0	.
chr4	52315191	52315192	chr4:52315192:A:G	rs17612939	A	G	A	SOX2_HMG_3	-10	0	-	0	0	.
chr4	52483416	52483417	chr4:52483417:T:C	rs10023109	T	C	C	SOX2_HMG_3	8	1	+	4.631909042588992	3.7601726899531296	TAACAATTTCAGTGGAG
chr4	52483424	52483425	chr4:52483425:G:C	rs145630090	G	C	G	SOX2_HMG_3	16	1	+	4.631909042588992	2.6320665476724487	TAACAATTTCAGTGGAG
chr4	53161850	53161851	chr4:53161851:G:C	chr4:53161851:G:C	G	C	G	SOX2_HMG_3	-3	0	-	0	0	.
chr4	53863044	53863045	chr4:53863045:C:T	rs1466833	C	T	T	SOX2_HMG_3	-20	0	+	0	0	.
chr4	54278945	54278946	chr4:54278946:A:G	rs76850938	A	G	A	SOX2_HMG_3	33	0	+	0	0	.
chr4	54403050	54403051	chr4:54403051:C:A	rs62297775	C	A	C	SOX2_HMG_3	17	0	-	0	0	.
chr4	54544971	54544972	chr4:54544972:T:C	rs218269	T	C	C	SOX2_HMG_3	6	1	+	4.040085950823165	-2.868668828492055	TTTCTATGCTAGTGAGA
chr4	54589947	54589948	chr4:54589948:G:A	rs936486551	G	A	G	SOX2_HMG_3	-9	0	-	0	0	.
chr4	54620623	54620624	chr4:54620624:G:T	rs12512899	G	T	G	SOX2_HMG_3	10	1	-	3.7835653339375166	10.692320113252737	TGGCAATGACCTTGATG
chr4	54620647	54620648	chr4:54620648:G:C	rs726080	G	C	G	SOX2_HMG_3	-14	0	-	0	0	.
chr4	54864386	54864387	chr4:54864387:T:G	rs1021604	T	G	G	SOX2_HMG_3	35	0	-	0	0	.
chr4	55185126	55185127	chr4:55185127:C:T	rs144555188	C	T	C	SOX2_HMG_3	29	0	-	0	0	.
chr4	55544620	55544621	chr4:55544621:T:C	rs7667741	T	C	T	SOX2_HMG_3	11	1	+	5.7510071734008	-0.941684324831547	AAGCAATCATATTGAAA
chr4	55768755	55768756	chr4:55768756:G:A	rs73238325	G	A	G	SOX2_HMG_3	29	0	-	0	0	.
chr4	55768761	55768762	chr4:55768762:C:T	rs73238326	C	T	C	SOX2_HMG_3	23	0	-	0	0	.
chr4	55850659	55850660	chr4:55850660:T:C	rs2012267	T	C	C	SOX2_HMG_3	-2	0	+	0	0	.
chr4	55905659	55905660	chr4:55905660:C:T	rs9968386	C	T	C	SOX2_HMG_3	30	0	+	0	0	.
chr4	55942075	55942076	chr4:55942076:T:C	rs2593072	T	C	C	SOX2_HMG_3	-18	0	+	0	0	.
chr4	56259840	56259841	chr4:56259841:A:G	rs61000253	A	G	A	SOX2_HMG_3	5	1	+	7.113002482435075	0.2042477031198534	GTACAATGGAAGTGAGG
chr4	56302231	56302232	chr4:56302232:G:A	rs28436241	G	A	G	SOX2_HMG_3	35	0	-	0	0	.
chr4	56691207	56691208	chr4:56691208:C:A	rs13141489	C	A	C	SOX2_HMG_3	31	0	+	0	0	.
chr4	57044118	57044119	chr4:57044119:A:G	rs11573106	A	G	A	SOX2_HMG_3	-9	0	+	0	0	.
chr4	57044152	57044153	chr4:57044153:G:C	rs11573105	G	C	G	SOX2_HMG_3	25	0	+	0	0	.
chr4	57080855	57080856	chr4:57080856:C:T	rs11936912	C	T	T	SOX2_HMG_3	0	1	+	3.873333963655407	3.7360049856067445	CACCAATGAAAGTGTGT
chr4	57285775	57285776	chr4:57285776:A:G	rs57826843	A	G	A	SOX2_HMG_3	-13	0	+	0	0	.
chr4	57312793	57312794	chr4:57312794:G:A	rs991920	G	A	G	SOX2_HMG_3	-20	0	+	0	0	.
chr4	57607958	57607959	chr4:57607959:T:C	rs112522775	T	C	T	SOX2_HMG_3	1	1	-	4.161610027274527	2.3299624371952348	CATTAATGCTATTGTGC
chr4	58119379	58119380	chr4:58119380:T:C	rs72642173	T	C	T	SOX2_HMG_3	16	1	-	4.571796816233988	4.845484432624259	ACTCATTTTCATTGAAA
chr4	58286017	58286018	chr4:58286018:T:C	rs28373573	T	C	T	SOX2_HMG_3	-18	0	+	0	0	.
chr4	58809701	58809702	chr4:58809702:C:T	rs77352715	C	T	c	SOX2_HMG_3	-11	0	-	0	0	.
chr4	60225358	60225359	chr4:60225359:G:C	rs76655661	G	C	G	SOX2_HMG_3	11	1	-	4.460015130041352	9.73562665905375	CAGCAATGACACTGAAA
chr4	60225373	60225374	chr4:60225374:G:A	rs7675725	G	A	G	SOX2_HMG_3	-4	0	-	0	0	.
chr4	60562818	60562819	chr4:60562819:G:A	rs1866498	G	A	G	SOX2_HMG_3	2	1	+	4.21199871201641	4.21199871201641	AAGCATTGCTATTGTTA
chr4	60562851	60562852	chr4:60562852:T:A	rs17090190	T	A	T	SOX2_HMG_3	35	0	+	0	0	.
chr4	60682894	60682895	chr4:60682895:A:G	rs7687640	A	G	A	SOX2_HMG_3	8	1	-	6.2319930288439584	5.360256676208095	TCTCATTGTTATTGAAT
chr4	61332704	61332705	chr4:61332705:T:C	rs1505678	T	C	C	SOX2_HMG_3	-8	0	+	0	0	.
chr4	61390349	61390350	chr4:61390350:A:G	rs17238968	A	G	A	SOX2_HMG_3	10	1	+	2.576328474310957	-4.332426305004262	AATCCACGGCATTGAAA
chr4	61426478	61426479	chr4:61426479:T:C	rs7686044	T	C	C	SOX2_HMG_3	28	0	-	0	0	.
chr4	62260373	62260374	chr4:62260374:T:A	rs73823366	T	A	T	SOX2_HMG_3	-18	0	-	0	0	.
chr4	62706303	62706304	chr4:62706304:T:G	rs72630526	T	G	T	SOX2_HMG_3	-1	0	+	0	0	.
chr4	63659743	63659744	chr4:63659744:A:G	rs17683007	A	G	A	SOX2_HMG_3	2	1	-	5.522232138741931	0.5188600684263432	TTTCAGTGTCATTGAGA
chr4	63670865	63670866	chr4:63670866:G:A	rs11131470	G	A	G	SOX2_HMG_3	25	0	-	0	0	.
chr4	63873692	63873693	chr4:63873693:T:C	rs984927947	T	C	T	SOX2_HMG_3	32	0	-	0	0	.
chr4	63906928	63906929	chr4:63906929:T:C	rs1349182	T	C	C	SOX2_HMG_3	24	0	+	0	0	.
chr4	64017725	64017726	chr4:64017726:C:T	rs6823750	C	T	C	SOX2_HMG_3	-8	0	+	0	0	.
chr4	64359588	64359589	chr4:64359589:C:T	rs17084731	C	T	C	SOX2_HMG_3	1	1	-	4.790524690308708	6.622172280387999	TGTCAATGTTATTTTGA
chr4	65566190	65566191	chr4:65566191:T:C	rs11931601	T	C	T	SOX2_HMG_3	-4	0	+	0	0	.
chr4	65651345	65651346	chr4:65651346:G:A	rs79064065	G	A	G	SOX2_HMG_3	23	0	+	0	0	.
chr4	65853329	65853330	chr4:65853330:C:T	rs17756441	C	T	C	SOX2_HMG_3	3	1	+	8.353995570802532	1.4452407914873118	AAACAATGATAGTGTAA
chr4	65868117	65868118	chr4:65868118:A:G	rs9996088	A	G	A	SOX2_HMG_3	21	0	-	0	0	.
chr4	66001108	66001109	chr4:66001109:A:T	rs6823796	A	T	A	SOX2_HMG_3	-17	0	+	0	0	.
chr4	66130279	66130280	chr4:66130280:G:A	rs4395555	G	A	A	SOX2_HMG_3	-19	0	+	0	0	.
chr4	66597773	66597774	chr4:66597774:T:C	rs4032301	T	C	c	SOX2_HMG_3	9	1	+	4.620384358588781	3.813714224651735	CACCATTGATATTGATT
chr4	66750793	66750794	chr4:66750794:C:T	rs10452261	C	T	C	SOX2_HMG_3	16	1	-	2.0060369575233077	1.7323493411330364	TATCCAAGGCAGTGATG
chr4	67091858	67091859	chr4:67091859:C:A	rs6552063	C	A	C	SOX2_HMG_3	30	0	+	0	0	.
chr4	67701729	67701730	chr4:67701730:C:A	rs375070176	C	A	C	SOX2_HMG_3	8	1	+	2.533586787785294	2.418811273192865	GGTCAGTGCAAGTGACT
chr4	67961859	67961860	chr4:67961860:G:A	rs4260588	G	A	G	SOX2_HMG_3	3	1	-	10.844490002552359	3.9357352232371365	GGTCAATGCCATTGTTC
chr4	67996243	67996244	chr4:67996244:C:T	rs1438407	C	T	c	SOX2_HMG_3	3	1	+	6.794597350550526	-0.11415742876469526	CCACAATGTTATTGTGA
chr4	68404750	68404751	chr4:68404751:C:A	rs141729907	C	A	c	SOX2_HMG_3	28	0	+	0	0	.
chr4	68462019	68462020	chr4:68462020:C:G	rs144869660	C	G	C	SOX2_HMG_3	30	0	-	0	0	.
chr4	68505583	68505584	chr4:68505584:A:T	rs28820893	A	T	a	SOX2_HMG_3	-8	0	-	0	0	.
chr4	68522727	68522728	chr4:68522728:A:C	rs34138969	A	C	a	SOX2_HMG_3	3	1	+	6.467856563541292	13.376611342856513	TAGAAATGGTATTGATT
chr4	68748163	68748164	chr4:68748164:C:T	rs428529	C	T	T	SOX2_HMG_3	-10	0	-	0	0	.
chr4	68927506	68927507	chr4:68927507:T:C	rs10903221	T	C	C	SOX2_HMG_3	-5	0	-	0	0	.
chr4	68952098	68952099	chr4:68952099:G:C	rs2168842	G	C	G	SOX2_HMG_3	-17	0	-	0	0	.
chr4	69225267	69225268	chr4:69225268:C:A	rs4694201	C	A	.	SOX2_HMG_3	3	1	-	3.2041491242391857	3.2041491242391857	GATGAATCATATTGAAG
chr4	69470865	69470866	chr4:69470866:G:A	rs2736519	G	A	g	SOX2_HMG_3	-18	0	-	0	0	.
chr4	69533218	69533219	chr4:69533219:T:C	rs4631116	T	C	T	SOX2_HMG_3	-4	0	-	0	0	.
chr4	69726919	69726920	chr4:69726920:A:C	rs4149417	A	C	A	SOX2_HMG_3	35	0	-	0	0	.
chr4	69728357	69728358	chr4:69728358:A:T	rs13115602	A	T	A	SOX2_HMG_3	35	0	-	0	0	.
chr4	69874862	69874863	chr4:69874863:G:A	rs13112570	G	A	G	SOX2_HMG_3	28	0	-	0	0	.
chr4	69936499	69936500	chr4:69936500:T:C	rs962689	T	C	T	SOX2_HMG_3	12	1	+	7.059661475626839	0.15090669631161902	CATCAATGAAATTTAAA
chr4	70089245	70089246	chr4:70089246:C:T	rs111865481	C	T	C	SOX2_HMG_3	26	0	-	0	0	.
chr4	70103611	70103612	chr4:70103612:G:A	rs74874539	G	A	G	SOX2_HMG_3	34	0	-	0	0	.
chr4	70241646	70241647	chr4:70241647:T:A	rs17148376	T	A	A	SOX2_HMG_3	2	1	+	6.302646506150165	2.435031671472123	TCTCAATGTCAGTGGGT
chr4	70249335	70249336	chr4:70249336:T:A	rs3775740	T	A	T	SOX2_HMG_3	-11	0	-	0	0	.
chr4	70249342	70249343	chr4:70249343:G:A	rs3775739	G	A	A	SOX2_HMG_3	-18	0	-	0	0	.
chr4	70541436	70541437	chr4:70541437:T:C	rs28408923	T	C	C	SOX2_HMG_3	19	0	-	0	0	.
chr4	70838310	70838311	chr4:70838311:C:T	rs4694345	C	T	T	SOX2_HMG_3	-3	0	+	0	0	.
chr4	70838315	70838316	chr4:70838316:T:C	rs11729825	T	C	T	SOX2_HMG_3	2	1	+	5.746193078678013	0.7428210083624254	AGTCAATTTCATAGAAA
chr4	70885343	70885344	chr4:70885344:G:A	chr4:70885344:G:A	G	A	G	SOX2_HMG_3	-12	0	-	0	0	.
chr4	71029223	71029224	chr4:71029224:A:G	rs77592672	A	G	a	SOX2_HMG_3	5	1	+	6.648619535765119	-0.26013524355010287	ATGCAATGGCATTGTGG
chr4	71051161	71051162	chr4:71051162:A:G	rs12511905	A	G	A	SOX2_HMG_3	-13	0	-	0	0	.
chr4	71520505	71520506	chr4:71520506:A:T	rs78990481	A	T	A	SOX2_HMG_3	12	1	-	1.7193171758042844	-5.189437603510935	AGTCAGTGGTAGTGCTG
chr4	71527276	71527277	chr4:71527277:G:A	rs28605298	G	A	G	SOX2_HMG_3	-19	0	+	0	0	.
chr4	71527318	71527319	chr4:71527319:G:A	rs55667234	G	A	G	SOX2_HMG_3	23	0	+	0	0	.
chr4	72110935	72110936	chr4:72110936:T:C	rs115976041	T	C	T	SOX2_HMG_3	19	0	+	0	0	.
chr4	72326831	72326832	chr4:72326832:A:G	rs74881571	A	G	A	SOX2_HMG_3	33	0	-	0	0	.
chr4	72326843	72326844	chr4:72326844:T:C	rs77597747	T	C	T	SOX2_HMG_3	21	0	-	0	0	.
chr4	72326874	72326875	chr4:72326875:A:C	rs151111594	A	C	A	SOX2_HMG_3	-10	0	-	0	0	.
chr4	72567177	72567178	chr4:72567178:C:T	rs1401153	C	T	C	SOX2_HMG_3	16	1	-	3.0366834276474584	2.762995811257187	GCTAAATTATAGTGAGG
chr4	72809439	72809440	chr4:72809440:A:G	rs1114360	A	G	A	SOX2_HMG_3	21	0	+	0	0	.
chr4	72952736	72952737	chr4:72952737:T:C	rs55897524	T	C	C	SOX2_HMG_3	31	0	+	0	0	.
chr4	72992135	72992136	chr4:72992136:A:G	rs13135890	A	G	A	SOX2_HMG_3	-14	0	-	0	0	.
chr4	73577573	73577574	chr4:73577574:T:C	rs75521381	T	C	T	SOX2_HMG_3	-17	0	+	0	0	.
chr4	73609791	73609792	chr4:73609792:C:T	rs62312138	C	T	C	SOX2_HMG_3	9	1	+	6.396158534534609	7.202828668471654	GGTCAGTGGCATTGTTA
chr4	73662060	73662061	chr4:73662061:T:G	rs1247684	T	G	T	SOX2_HMG_3	23	0	-	0	0	.
chr4	74319043	74319044	chr4:74319044:A:G	rs16850918	A	G	A	SOX2_HMG_3	-2	0	-	0	0	.
chr4	74358872	74358873	chr4:74358873:T:C	rs1350666	T	C	T	SOX2_HMG_3	22	0	-	0	0	.
chr4	74362753	74362754	chr4:74362754:T:C	rs3822102	T	C	T	SOX2_HMG_3	-10	0	-	0	0	.
chr4	74411325	74411326	chr4:74411326:G:A	rs28756033	G	A	G	SOX2_HMG_3	13	1	+	3.8242375754509137	-3.0845172038643067	GGAAAATGGCAGTGATA
chr4	74415796	74415797	chr4:74415797:T:C	rs7442533	T	C	T	SOX2_HMG_3	24	0	-	0	0	.
chr4	74415797	74415798	chr4:74415798:C:T	chr4:74415798:C:T	C	T	C	SOX2_HMG_3	23	0	-	0	0	.
chr4	74423637	74423638	chr4:74423638:T:C	rs932550907	T	C	c	SOX2_HMG_3	-19	0	+	0	0	.
chr4	74423647	74423648	chr4:74423648:A:G	rs9996239	A	G	a	SOX2_HMG_3	-9	0	+	0	0	.
chr4	74502238	74502239	chr4:74502239:A:G	rs1797581	A	G	G	SOX2_HMG_3	36	0	+	0	0	.
chr4	74504521	74504522	chr4:74504522:A:G	rs3113928	A	G	A	SOX2_HMG_3	29	0	-	0	0	.
chr4	74504558	74504559	chr4:74504559:A:T	rs3113929	A	T	T	SOX2_HMG_3	-8	0	-	0	0	.
chr4	74757157	74757158	chr4:74757158:C:T	rs9307117	C	T	C	SOX2_HMG_3	18	0	-	0	0	.
chr4	75024385	75024386	chr4:75024386:T:C	rs72660383	T	C	T	SOX2_HMG_3	21	0	+	0	0	.
chr4	75364881	75364882	chr4:75364882:C:T	rs3853185	C	T	C	SOX2_HMG_3	10	1	-	5.834448794484558	12.74320357379978	TATCAATATTGTTGTTG
chr4	76051499	76051500	chr4:76051500:A:G	rs28433437	A	G	G	SOX2_HMG_3	23	0	-	0	0	.
chr4	76106082	76106083	chr4:76106083:C:A	rs10006482	C	A	A	SOX2_HMG_3	-1	0	+	0	0	.
chr4	76188725	76188726	chr4:76188726:A:C	rs17001603	A	C	A	SOX2_HMG_3	-5	0	+	0	0	.
chr4	76278057	76278058	chr4:76278058:A:C	rs3817118	A	C	A	SOX2_HMG_3	25	0	+	0	0	.
chr4	76447039	76447040	chr4:76447040:C:T	rs17001966	C	T	C	SOX2_HMG_3	30	0	-	0	0	.
chr4	76535651	76535652	chr4:76535652:G:A	rs4563521	G	A	A	SOX2_HMG_3	32	0	+	0	0	.
chr4	76655821	76655822	chr4:76655822:C:T	rs11727631	C	T	T	SOX2_HMG_3	7	1	-	5.946522411260186	3.21773529069885	GATAAATGCCAGTGACA
chr4	76991709	76991710	chr4:76991710:G:A	rs904029	G	A	A	SOX2_HMG_3	-7	0	+	0	0	.
chr4	76991731	76991732	chr4:76991732:T:C	rs904030	T	C	T	SOX2_HMG_3	15	1	+	4.9266847534688605	2.083975597292002	ACGCCATGGTATTGATG
chr4	77013017	77013018	chr4:77013018:G:A	rs1532449	G	A	G	SOX2_HMG_3	26	0	+	0	0	.
chr4	77252185	77252186	chr4:77252186:G:T	chr4:77252186:G:T	G	T	G	SOX2_HMG_3	30	0	-	0	0	.
chr4	77394292	77394293	chr4:77394293:C:T	rs6843922	C	T	T	SOX2_HMG_3	-20	0	-	0	0	.
chr4	77414630	77414631	chr4:77414631:G:A	rs35481793	G	A	G	SOX2_HMG_3	-12	0	+	0	0	.
chr4	77479484	77479485	chr4:77479485:T:A	rs75629616	T	A	T	SOX2_HMG_3	24	0	-	0	0	.
chr4	77877493	77877494	chr4:77877494:T:C	rs4859511	T	C	C	SOX2_HMG_3	1	1	+	5.908747884315213	5.908747884315213	TTTCAGTGGCAGTGATG
chr4	78098676	78098677	chr4:78098677:T:C	rs13106755	T	C	t	SOX2_HMG_3	15	1	+	3.423116926743256	0.5804077705663981	TATAAATGGCTTTGATG
chr4	78230559	78230560	chr4:78230560:C:T	rs1470989	C	T	C	SOX2_HMG_3	32	0	+	0	0	.
chr4	78479713	78479714	chr4:78479714:C:T	rs11098194	C	T	C	SOX2_HMG_3	18	0	+	0	0	.
chr4	79296907	79296908	chr4:79296908:T:C	rs17494639	T	C	T	SOX2_HMG_3	26	0	+	0	0	.
chr4	79445374	79445375	chr4:79445375:C:T	rs58146485	C	T	C	SOX2_HMG_3	-10	0	-	0	0	.
chr4	79497476	79497477	chr4:79497477:G:A	rs1971838	G	A	G	SOX2_HMG_3	7	1	+	4.590235467874564	1.8614483473132273	TGACAATGATATGGATG
chr4	79585990	79585991	chr4:79585991:C:A	rs116186422	C	A	C	SOX2_HMG_3	7	1	-	4.570680195294285	2.52596969056075	TCTCAATGATATGGTTG
chr4	79622403	79622404	chr4:79622404:C:A	rs13133572	C	A	A	SOX2_HMG_3	31	0	-	0	0	.
chr4	79851765	79851766	chr4:79851766:G:A	rs10021224	G	A	G	SOX2_HMG_3	34	0	+	0	0	.
chr4	80713607	80713608	chr4:80713608:C:T	rs74686702	C	T	C	SOX2_HMG_3	-18	0	+	0	0	.
chr4	81508635	81508636	chr4:81508636:T:C	rs1043554919	T	C	T	SOX2_HMG_3	35	0	+	0	0	.
chr4	81512194	81512195	chr4:81512195:A:T	rs895087	A	T	T	SOX2_HMG_3	-5	0	+	0	0	.
chr4	81666896	81666897	chr4:81666897:T:C	rs28594977	T	C	C	SOX2_HMG_3	-14	0	-	0	0	.
chr4	81991309	81991310	chr4:81991310:A:G	rs1867338	A	G	G	SOX2_HMG_3	-13	0	+	0	0	.
chr4	82184473	82184474	chr4:82184474:C:A	rs62319682	C	A	C	SOX2_HMG_3	-4	0	+	0	0	.
chr4	82230489	82230490	chr4:82230490:T:C	chr4:82230490:T:C	T	C	T	SOX2_HMG_3	-11	0	+	0	0	.
chr4	82631655	82631656	chr4:82631656:A:C	rs3857138	A	C	C	SOX2_HMG_3	17	0	-	0	0	.
chr4	82652223	82652224	chr4:82652224:A:T	rs13135867	A	T	A	SOX2_HMG_3	-4	0	+	0	0	.
chr4	82833733	82833734	chr4:82833734:T:C	rs28611098	T	C	T	SOX2_HMG_3	35	0	+	0	0	.
chr4	82892864	82892865	chr4:82892865:G:A	rs1020748	G	A	A	SOX2_HMG_3	8	1	+	3.2805353503609997	2.431491402997371	GGTCACTGGTATTTATG
chr4	83561506	83561507	chr4:83561507:A:G	rs62305329	A	G	A	SOX2_HMG_3	4	1	+	2.5377651842754925	-4.370989595039728	CCTCATTGTCAGTGACT
chr4	83561513	83561514	chr4:83561514:G:A	rs144914748	G	A	G	SOX2_HMG_3	11	1	+	2.5377651842754925	-2.737846344736906	CCTCATTGTCAGTGACT
chr4	83759772	83759773	chr4:83759773:T:C	rs1379981	T	C	C	SOX2_HMG_3	4	1	-	3.5605848466079197	-3.3481699327073	TATTAATGTCATGGATG
chr4	84145241	84145242	chr4:84145242:T:G	rs9992120	T	G	G	SOX2_HMG_3	9	1	-	10.89528321333124	11.947188421340922	TGTCAATTGAAGTGATG
chr4	84686611	84686612	chr4:84686612:T:C	rs62303075	T	C	T	SOX2_HMG_3	5	1	-	4.131278331201286	-2.7774764481139345	TAGCCATGTCATTGAGT
chr4	84937175	84937176	chr4:84937176:T:C	rs6848127	T	C	C	SOX2_HMG_3	5	1	-	4.138834277495004	-2.769920501820217	CTTGAATTTCAGTGATG
chr4	84948629	84948630	chr4:84948630:T:A	rs11097028	T	A	T	SOX2_HMG_3	-19	0	-	0	0	.
chr4	85422822	85422823	chr4:85422823:G:C	rs17010223	G	C	G	SOX2_HMG_3	23	0	-	0	0	.
chr4	85608187	85608188	chr4:85608188:A:G	rs4453927	A	G	G	SOX2_HMG_3	27	0	+	0	0	.
chr4	85794250	85794251	chr4:85794251:T:A	rs12503243	T	A	T	SOX2_HMG_3	31	0	-	0	0	.
chr4	85833213	85833214	chr4:85833214:C:T	rs74363751	C	T	C	SOX2_HMG_3	8	1	-	5.921822894170952	5.0727789468073246	TATCAATGGAAGTCAGA
chr4	86044267	86044268	chr4:86044268:A:C	rs114925718	A	C	A	SOX2_HMG_3	-2	0	-	0	0	.
chr4	86453422	86453423	chr4:86453423:G:A	rs72663991	G	A	G	SOX2_HMG_3	13	1	+	2.2585398368914333	-4.650214942423786	GCACAATGGGAGTGAGA
chr4	87405227	87405228	chr4:87405228:G:T	rs11097151	G	T	T	SOX2_HMG_3	-14	0	+	0	0	.
chr4	87615209	87615210	chr4:87615210:G:A	rs111205174	G	A	A	SOX2_HMG_3	-17	0	+	0	0	.
chr4	87811765	87811766	chr4:87811766:A:T	rs1054629	A	T	A	SOX2_HMG_3	-18	0	+	0	0	.
chr4	88172911	88172912	chr4:88172912:T:C	rs2622629	T	C	T	SOX2_HMG_3	-5	0	+	0	0	.
chr4	88230874	88230875	chr4:88230875:C:T	rs41451944	C	T	C	SOX2_HMG_3	-19	0	+	0	0	.
chr4	88230910	88230911	chr4:88230911:C:T	rs10032109	C	T	C	SOX2_HMG_3	17	0	+	0	0	.
chr4	88265915	88265916	chr4:88265916:G:C	rs4693209	G	C	C	SOX2_HMG_3	35	0	+	0	0	.
chr4	88709877	88709878	chr4:88709878:A:G	rs2972030	A	G	A	SOX2_HMG_3	5	1	+	4.7267797713136	-2.181975008001621	GATCAATGACGGTGTAA
chr4	88812730	88812731	chr4:88812731:A:G	rs6814344	A	G	G	SOX2_HMG_3	-19	0	-	0	0	.
chr4	88818652	88818653	chr4:88818653:T:G	rs3775381	T	G	T	SOX2_HMG_3	4	1	-	7.111196022045297	0.20244124273007602	TATCACTGTCAGTGAGA
chr4	89113534	89113535	chr4:89113535:A:G	rs17015027	A	G	A	SOX2_HMG_3	15	1	-	2.3907388572033224	-0.45197029897353613	AGTTAATGTCCTTGATG
chr4	89382704	89382705	chr4:89382705:A:G	rs7677756	A	G	a	SOX2_HMG_3	2	1	-	6.239788649346197	1.2364165790306099	AATAAATTGTATTGTTT
chr4	89788442	89788443	chr4:89788443:C:T	rs115322031	C	T	C	SOX2_HMG_3	-19	0	-	0	0	.
chr4	89868387	89868388	chr4:89868388:A:G	rs10516849	A	G	A	SOX2_HMG_3	9	1	-	3.92423009614725	3.117559962210203	CAGCAATCCTAGTGAAA
chr4	90118631	90118632	chr4:90118632:C:T	rs7679917	C	T	C	SOX2_HMG_3	-20	0	+	0	0	.
chr4	90341230	90341231	chr4:90341231:C:A	rs7663503	C	A	A	SOX2_HMG_3	-6	0	+	0	0	.
chr4	90460006	90460007	chr4:90460007:C:A	rs62312946	C	A	c	SOX2_HMG_3	32	0	+	0	0	.
chr4	90873365	90873366	chr4:90873366:G:A	rs13135385	G	A	G	SOX2_HMG_3	20	0	+	0	0	.
chr4	91256297	91256298	chr4:91256298:G:A	rs57373593	G	A	G	SOX2_HMG_3	34	0	-	0	0	.
chr4	91623252	91623253	chr4:91623253:C:T	rs11947273	C	T	C	SOX2_HMG_3	-2	0	-	0	0	.
chr4	91623256	91623257	chr4:91623257:G:T	rs28676799	G	T	G	SOX2_HMG_3	-6	0	-	0	0	.
chr4	92256228	92256229	chr4:92256229:G:C	rs7696156	G	C	G	SOX2_HMG_3	7	1	+	5.9389343485836115	-0.7939078628523637	CATCAATGTTAATGGAA
chr4	92507183	92507184	chr4:92507184:T:C	rs7659159	T	C	C	SOX2_HMG_3	6	1	+	3.14431565383539	-3.7644391254798295	GGTTAATGTTTTTGATA
chr4	93116812	93116813	chr4:93116813:A:G	rs72887644	A	G	A	SOX2_HMG_3	-19	0	+	0	0	.
chr4	93834362	93834363	chr4:93834363:G:A	rs6835250	G	A	A	SOX2_HMG_3	25	0	+	0	0	.
chr4	94208873	94208874	chr4:94208874:G:A	rs183993	G	A	A	SOX2_HMG_3	4	1	+	5.263970260008948	12.172725039324167	GAGCGATGTCAGTGATT
chr4	94648064	94648065	chr4:94648065:A:T	rs7656545	A	T	A	SOX2_HMG_3	26	0	-	0	0	.
chr4	94714808	94714809	chr4:94714809:T:C	rs11934616	T	C	T	SOX2_HMG_3	14	1	-	5.639675736732066	1.4577981194309466	TGTGAATGGTATTGAGC
chr4	95017424	95017425	chr4:95017425:G:A	rs568440380	G	A	G	SOX2_HMG_3	-16	0	+	0	0	.
chr4	95017441	95017442	chr4:95017442:A:G	rs10018945	A	G	G	SOX2_HMG_3	1	1	+	9.181721472870194	7.350073882790904	AAGCAATGTTAGTGTGG
chr4	95184255	95184256	chr4:95184256:A:G	rs17415818	A	G	A	SOX2_HMG_3	5	1	+	3.279782506413574	-3.6289722729016463	GACCAATGAGAGTGAGA
chr4	95262431	95262432	chr4:95262432:G:A	rs12649047	G	A	G	SOX2_HMG_3	-6	0	+	0	0	.
chr4	95289569	95289570	chr4:95289570:A:T	rs6810943	A	T	A	SOX2_HMG_3	35	0	+	0	0	.
chr4	95432021	95432022	chr4:95432022:G:A	rs1483748	G	A	G	SOX2_HMG_3	-3	0	+	0	0	.
chr4	95627406	95627407	chr4:95627407:A:C	rs6820560	A	C	A	SOX2_HMG_3	5	1	+	6.270465916534459	-0.6382888627807632	GCACAATGACAGTGTTG
chr4	95705798	95705799	chr4:95705799:G:A	rs72884057	G	A	G	SOX2_HMG_3	0	1	+	4.256774664637828	4.036180385552535	GAACAATGGAATTTAAT
chr4	96103405	96103406	chr4:96103406:A:G	chr4:96103406:A:G	A	G	A	SOX2_HMG_3	31	0	-	0	0	.
chr4	96407951	96407952	chr4:96407952:T:C	chr4:96407952:T:C	T	C	T	SOX2_HMG_3	-2	0	+	0	0	.
chr4	96473529	96473530	chr4:96473530:T:G	rs938547	T	G	G	SOX2_HMG_3	27	0	+	0	0	.
chr4	96705228	96705229	chr4:96705229:T:C	rs1922840	T	C	C	SOX2_HMG_3	-2	0	-	0	0	.
chr4	98526835	98526836	chr4:98526836:G:A	rs17191936	G	A	G	SOX2_HMG_3	-2	0	-	0	0	.
chr4	98547519	98547520	chr4:98547520:C:G	rs59832984	C	G	C	SOX2_HMG_3	-20	0	-	0	0	.
chr4	98581367	98581368	chr4:98581368:C:G	rs72904109	C	G	C	SOX2_HMG_3	-17	0	-	0	0	.
chr4	98611324	98611325	chr4:98611325:G:A	rs7700024	G	A	G	SOX2_HMG_3	-10	0	+	0	0	.
chr4	98639251	98639252	chr4:98639252:T:G	rs72908197	T	G	T	SOX2_HMG_3	-14	0	-	0	0	.
chr4	98995189	98995190	chr4:98995190:A:G	rs62323237	A	G	A	SOX2_HMG_3	18	0	+	0	0	.
chr4	99631315	99631316	chr4:99631316:T:C	rs80085001	T	C	C	SOX2_HMG_3	8	1	+	3.453839693110657	2.5821033404747946	AGTCAATGTTATTTGGT
chr4	99733527	99733528	chr4:99733528:G:A	rs12642668	G	A	G	SOX2_HMG_3	-4	0	+	0	0	.
chr4	100076163	100076164	chr4:100076164:A:C	rs78648824	A	C	A	SOX2_HMG_3	-15	0	-	0	0	.
chr4	100276721	100276722	chr4:100276722:T:G	rs4072236	T	G	T	SOX2_HMG_3	16	1	-	2.4973860937075916	0.7712312151813194	AATCCATGTCACTGAGA
chr4	100291045	100291046	chr4:100291046:G:A	rs78908948	G	A	G	SOX2_HMG_3	3	1	-	3.7813869362461783	-3.127367843069042	CACCAATGTCAATGAAT
chr4	100421094	100421095	chr4:100421095:G:A	rs34038967	G	A	A	SOX2_HMG_3	30	0	-	0	0	.
chr4	100591889	100591890	chr4:100591890:A:G	rs28476753	A	G	G	SOX2_HMG_3	10	1	+	7.671686551856331	0.7629317725411084	AATCAGTTATATTGAAG
chr4	100604342	100604343	chr4:100604343:T:C	rs1015319546	T	C	T	SOX2_HMG_3	-8	0	-	0	0	.
chr4	100609303	100609304	chr4:100609304:C:T	rs111528787	C	T	C	SOX2_HMG_3	26	0	-	0	0	.
chr4	100631719	100631720	chr4:100631720:G:A	rs4618316	G	A	G	SOX2_HMG_3	30	0	-	0	0	.
chr4	100779461	100779462	chr4:100779462:A:G	rs1396284	A	G	A	SOX2_HMG_3	-15	0	+	0	0	.
chr4	101285818	101285819	chr4:101285819:C:T	rs72921877	C	T	C	SOX2_HMG_3	30	0	+	0	0	.
chr4	101760113	101760114	chr4:101760114:C:T	rs4277781	C	T	C	SOX2_HMG_3	-16	0	-	0	0	.
chr4	102180132	102180133	chr4:102180133:G:A	rs57328322	G	A	G	SOX2_HMG_3	7	1	+	2.278318947644973	-0.45046817291636154	AATCATTGGCAGTGGCA
chr4	102406725	102406726	chr4:102406726:G:C	rs4699024	G	C	C	SOX2_HMG_3	36	0	-	0	0	.
chr4	102615103	102615104	chr4:102615104:C:T	rs230547	C	T	T	SOX2_HMG_3	-19	0	+	0	0	.
chr4	102859764	102859765	chr4:102859765:C:T	rs223344	C	T	C	SOX2_HMG_3	-5	0	-	0	0	.
chr4	103533703	103533704	chr4:103533704:C:T	rs420379	C	T	C	SOX2_HMG_3	30	0	-	0	0	.
chr4	104032793	104032794	chr4:104032794:T:C	rs979022	T	C	C	SOX2_HMG_3	-2	0	-	0	0	.
chr4	104279486	104279487	chr4:104279487:G:A	rs67125592	G	A	G	SOX2_HMG_3	-5	0	-	0	0	.
chr4	104780396	104780397	chr4:104780397:G:A	rs964967118	G	A	G	SOX2_HMG_3	8	1	+	8.7180531761603	7.869009228796671	CAGCAATGGTAGTGGTG
chr4	104780418	104780419	chr4:104780419:A:G	rs72664153	A	G	A	SOX2_HMG_3	30	0	+	0	0	.
chr4	105102562	105102563	chr4:105102563:G:A	rs17429647	G	A	G	SOX2_HMG_3	0	1	-	2.9500360695090184	2.812707091460354	CATCAGTGGTAGTTATG
chr4	105145353	105145354	chr4:105145354:G:C	rs147433049	G	C	G	SOX2_HMG_3	-6	0	-	0	0	.
chr4	105150439	105150440	chr4:105150440:T:A	rs763480	T	A	A	SOX2_HMG_3	9	1	+	4.754121620746387	2.895546278799658	TTTTAATGTTATTGTTT
chr4	105170788	105170789	chr4:105170789:T:C	rs17430146	T	C	T	SOX2_HMG_3	-15	0	-	0	0	.
chr4	105215938	105215939	chr4:105215939:G:C	rs140115170	G	C	G	SOX2_HMG_3	-7	0	-	0	0	.
chr4	105552200	105552201	chr4:105552201:T:A	rs77567800	T	A	T	SOX2_HMG_3	-19	0	-	0	0	.
chr4	105606007	105606008	chr4:105606008:A:G	rs4324547	A	G	A	SOX2_HMG_3	-16	0	-	0	0	.
chr4	105623368	105623369	chr4:105623369:A:G	rs3796920	A	G	G	SOX2_HMG_3	-11	0	-	0	0	.
chr4	105642249	105642250	chr4:105642250:T:A	rs1447099	T	A	A	SOX2_HMG_3	17	0	-	0	0	.
chr4	105754788	105754789	chr4:105754789:A:T	rs11731714	A	T	A	SOX2_HMG_3	25	0	-	0	0	.
chr4	106201595	106201596	chr4:106201596:G:A	rs12645271	G	A	G	SOX2_HMG_3	11	1	+	3.513173899820621	-1.762437629191777	AAGCAAGAGTAGTGATA
chr4	106212761	106212762	chr4:106212762:A:G	rs17036613	A	G	G	SOX2_HMG_3	1	1	+	4.362618089503599	2.5309704994243063	AACCAATCTCATTGAGA
chr4	106899041	106899042	chr4:106899042:T:C	rs1454900254	T	C	T	SOX2_HMG_3	0	1	+	4.235949767032566	4.3732787450812305	TTTCAATGGAATTTAAT
chr4	107033865	107033866	chr4:107033866:G:C	rs139718739	G	C	.	SOX2_HMG_3	32	0	+	0	0	.
chr4	107352407	107352408	chr4:107352408:T:C	rs203726	T	C	C	SOX2_HMG_3	6	1	+	2.267919132767802	-4.640835646547419	CATCAATGGCCATGAAA
chr4	107470226	107470227	chr4:107470227:A:G	rs1548487	A	G	A	SOX2_HMG_3	-4	0	-	0	0	.
chr4	107644452	107644453	chr4:107644453:G:A	rs11934943	G	A	G	SOX2_HMG_3	-7	0	+	0	0	.
chr4	107792751	107792752	chr4:107792752:G:A	rs75258371	G	A	A	SOX2_HMG_3	31	0	-	0	0	.
chr4	107818754	107818755	chr4:107818755:T:C	rs61323116	T	C	T	SOX2_HMG_3	10	1	-	3.764923364376781	-3.1438314149384405	GATCAGTGACAGTGTGT
chr4	108370954	108370955	chr4:108370955:T:C	rs6842122	T	C	T	SOX2_HMG_3	-11	0	-	0	0	.
chr4	108556951	108556952	chr4:108556952:C:G	rs11731416	C	G	G	SOX2_HMG_3	7	1	-	6.746341931323793	0.01349971988781723	CATCAATGAAAATGAAT
chr4	108804766	108804767	chr4:108804767:G:C	rs2044993	G	C	G	SOX2_HMG_3	23	0	+	0	0	.
chr4	108907122	108907123	chr4:108907123:T:G	rs11731391	T	G	T	SOX2_HMG_3	14	1	-	8.497364542156093	1.6650658365894018	CATCAATCCTAGTGATT
chr4	109060607	109060608	chr4:109060608:C:T	rs3113684	C	T	T	SOX2_HMG_3	35	0	+	0	0	.
chr4	109729183	109729184	chr4:109729184:A:C	rs11737069	A	C	A	SOX2_HMG_3	20	0	+	0	0	.
chr4	110225051	110225052	chr4:110225052:C:T	rs4585374	C	T	C	SOX2_HMG_3	-17	0	+	0	0	.
chr4	110306436	110306437	chr4:110306437:G:C	rs10010721	G	C	G	SOX2_HMG_3	33	0	-	0	0	.
chr4	110669087	110669088	chr4:110669088:C:T	rs2122076	C	T	C	SOX2_HMG_3	8	1	+	5.156887602567208	6.028623955203072	AAAGAATGCCATTGAAG
chr4	111294499	111294500	chr4:111294500:C:T	rs13125281	C	T	A	SOX2_HMG_3	-1	0	+	0	0	.
chr4	111323633	111323634	chr4:111323634:A:G	rs7684254	A	G	G	SOX2_HMG_3	17	0	-	0	0	.
chr4	111562740	111562741	chr4:111562741:T:G	rs11722462	T	G	G	SOX2_HMG_3	-12	0	-	0	0	.
chr4	111959257	111959258	chr4:111959258:C:T	rs2016740	C	T	C	SOX2_HMG_3	-17	0	-	0	0	.
chr4	112332544	112332545	chr4:112332545:T:G	rs6820941	T	G	G	SOX2_HMG_3	-6	0	-	0	0	.
chr4	113435006	113435007	chr4:113435007:G:A	rs9307390	G	A	A	SOX2_HMG_3	-4	0	-	0	0	.
chr4	113446156	113446157	chr4:113446157:C:T	rs78104782	C	T	C	SOX2_HMG_3	15	1	+	11.096636944461933	13.939346100638792	GAGCAATGATATTGACA
chr4	113564661	113564662	chr4:113564662:T:C	rs902271813	T	C	T	SOX2_HMG_3	14	1	-	4.37733958778073	0.195461970479611	GTTCAATTCAATTAATG
chr4	113675878	113675879	chr4:113675879:G:A	rs74339210	G	A	G	SOX2_HMG_3	22	0	-	0	0	.
chr4	113849121	113849122	chr4:113849122:C:T	rs79041353	C	T	C	SOX2_HMG_3	21	0	+	0	0	.
chr4	113946530	113946531	chr4:113946531:G:A	rs28700902	G	A	-	SOX2_HMG_3	-10	0	+	0	0	.
chr4	114271236	114271237	chr4:114271237:A:G	rs139348676	A	G	A	SOX2_HMG_3	17	0	-	0	0	.
chr4	114701653	114701654	chr4:114701654:C:G	rs13133286	C	G	C	SOX2_HMG_3	36	0	-	0	0	.
chr4	114949874	114949875	chr4:114949875:C:T	rs998359	C	T	T	SOX2_HMG_3	33	0	+	0	0	.
chr4	115167889	115167890	chr4:115167890:T:C	rs9994109	T	C	T	SOX2_HMG_3	25	0	+	0	0	.
chr4	115495492	115495493	chr4:115495493:T:A	rs6533921	T	A	A	SOX2_HMG_3	7	1	+	6.492465235802865	5.808388619975066	GGTCAAATATATTGATT
chr4	116332947	116332948	chr4:116332948:T:C	rs6533967	T	C	C	SOX2_HMG_3	4	1	+	4.222386447282613	4.222386447282613	AATCTATGTCGTTGATG
chr4	116603613	116603614	chr4:116603614:C:G	rs7679562	C	G	C	SOX2_HMG_3	18	0	-	0	0	.
chr4	116874786	116874787	chr4:116874787:G:A	rs72675454	G	A	G	SOX2_HMG_3	32	0	+	0	0	.
chr4	117376774	117376775	chr4:117376775:G:C	rs12331566	G	C	G	SOX2_HMG_3	-2	0	+	0	0	.
chr4	117400078	117400079	chr4:117400079:T:C	rs17866921	T	C	T	SOX2_HMG_3	21	0	-	0	0	.
chr4	117651579	117651580	chr4:117651580:C:A	rs2087440	C	A	A	SOX2_HMG_3	-7	0	+	0	0	.
chr4	118173309	118173310	chr4:118173310:C:T	rs11947071	C	T	T	SOX2_HMG_3	26	0	-	0	0	.
chr4	118842361	118842362	chr4:118842362:G:A	rs59075024	G	A	G	SOX2_HMG_3	-4	0	+	0	0	.
chr4	118894946	118894947	chr4:118894947:A:G	rs62326783	A	G	A	SOX2_HMG_3	5	1	+	4.883818734310381	-2.02493604500484	CATCAATGGAAGTCACA
chr4	119049434	119049435	chr4:119049435:C:T	rs17330327	C	T	T	SOX2_HMG_3	34	0	+	0	0	.
chr4	119148490	119148491	chr4:119148491:C:A	rs6857405	C	A	C	SOX2_HMG_3	-7	0	-	0	0	.
chr4	119304192	119304193	chr4:119304193:T:C	rs1397611	T	C	T	SOX2_HMG_3	18	0	-	0	0	.
chr4	119317918	119317919	chr4:119317919:A:G	rs10213267	A	G	a	SOX2_HMG_3	-7	0	-	0	0	.
chr4	119518093	119518094	chr4:119518094:A:G	rs534526888	A	G	A	SOX2_HMG_3	-3	0	-	0	0	.
chr4	119646997	119646998	chr4:119646998:G:A	rs74596183	G	A	G	SOX2_HMG_3	25	0	-	0	0	.
chr4	119647008	119647009	chr4:119647009:T:C	rs113399115	T	C	T	SOX2_HMG_3	14	1	-	1.517287367024985	-2.6645902502761345	CAGCAATGGCAGGGAGC
chr4	119657384	119657385	chr4:119657385:A:G	rs7664440	A	G	A	SOX2_HMG_3	-6	0	-	0	0	.
chr4	120159128	120159129	chr4:120159129:A:G	rs10005967	A	G	-	SOX2_HMG_3	-2	0	-	0	0	.
chr4	120242963	120242964	chr4:120242964:G:A	rs9684604	G	A	G	SOX2_HMG_3	23	0	-	0	0	.
chr4	120696685	120696686	chr4:120696686:A:G	rs10012771	A	G	A	SOX2_HMG_3	1	1	+	3.766542480930325	1.934894890851034	AATAAATGTCAGTGTAC
chr4	120820100	120820101	chr4:120820101:A:G	rs343187	A	G	A	SOX2_HMG_3	-17	0	+	0	0	.
chr4	121063749	121063750	chr4:121063750:T:C	rs4311329	T	C	C	SOX2_HMG_3	23	0	-	0	0	.
chr4	121140740	121140741	chr4:121140741:C:G	rs13108739	C	G	C	SOX2_HMG_3	21	0	+	0	0	.
chr4	121157827	121157828	chr4:121157828:C:A	rs17051300	C	A	C	SOX2_HMG_3	-12	0	-	0	0	.
chr4	121340440	121340441	chr4:121340441:A:T	rs12651331	A	T	A	SOX2_HMG_3	-6	0	-	0	0	.
chr4	121674478	121674479	chr4:121674479:A:G	rs4240260	A	G	G	SOX2_HMG_3	34	0	-	0	0	.
chr4	122131799	122131800	chr4:122131800:C:A	rs74360618	C	A	C	SOX2_HMG_3	31	0	-	0	0	.
chr4	122285396	122285397	chr4:122285397:G:A	rs193294687	G	A	G	SOX2_HMG_3	22	0	+	0	0	.
chr4	122603296	122603297	chr4:122603297:A:T	rs17005895	A	T	T	SOX2_HMG_3	30	0	-	0	0	.
chr4	122663580	122663581	chr4:122663581:T:A	rs72911957	T	A	T	SOX2_HMG_3	6	1	+	3.3170038111210793	-3.591750968194142	TGTAAATGGCATTGTGT
chr4	122865676	122865677	chr4:122865677:A:G	rs308387	A	G	G	SOX2_HMG_3	-18	0	+	0	0	.
chr4	122896372	122896373	chr4:122896373:T:C	rs7655413	T	C	C	SOX2_HMG_3	8	1	+	6.525935460747621	5.654199108111758	AATCAATTTATTTGAAA
chr4	123421787	123421788	chr4:123421788:T:A	rs28477361	T	A	T	SOX2_HMG_3	-7	0	-	0	0	.
chr4	123650036	123650037	chr4:123650037:T:A	rs114958980	T	A	T	SOX2_HMG_3	25	0	+	0	0	.
chr4	123868441	123868442	chr4:123868442:A:G	rs116819571	A	G	A	SOX2_HMG_3	11	1	-	5.517182994166043	-1.1755085040663042	ATTCAGTGGCATTGAGT
chr4	123894410	123894411	chr4:123894411:A:G	rs3113365	A	G	A	SOX2_HMG_3	2	1	-	2.4630113879398623	-2.540360682375726	CATCAATGTCCTTAAAG
chr4	124045852	124045853	chr4:124045853:G:A	rs78514534	G	A	G	SOX2_HMG_3	-4	0	+	0	0	.
chr4	124854874	124854875	chr4:124854875:C:G	rs11944773	C	G	G	SOX2_HMG_3	-7	0	+	0	0	.
chr4	124936783	124936784	chr4:124936784:C:T	rs1532493	C	T	C	SOX2_HMG_3	33	0	+	0	0	.
chr4	125125679	125125680	chr4:125125680:C:T	rs57273892	C	T	C	SOX2_HMG_3	24	0	+	0	0	.
chr4	125952023	125952024	chr4:125952024:T:A	rs965778	T	A	T	SOX2_HMG_3	31	0	+	0	0	.
chr4	126631047	126631048	chr4:126631048:C:A	rs434002	C	A	C	SOX2_HMG_3	13	1	-	5.108855491527672	-1.7998992877875482	AATCAGTTTAAGTGAAA
chr4	126702904	126702905	chr4:126702905:C:T	rs62324175	C	T	C	SOX2_HMG_3	-8	0	+	0	0	.
chr4	126844070	126844071	chr4:126844071:C:T	rs79042149	C	T	c	SOX2_HMG_3	22	0	-	0	0	.
chr4	127036381	127036382	chr4:127036382:C:T	rs11098909	C	T	T	SOX2_HMG_3	-14	0	+	0	0	.
chr4	127407801	127407802	chr4:127407802:G:A	chr4:127407802:G:A	G	A	G	SOX2_HMG_3	-10	0	-	0	0	.
chr4	127449360	127449361	chr4:127449361:C:T	rs79228965	C	T	C	SOX2_HMG_3	24	0	+	0	0	.
chr4	127449773	127449774	chr4:127449774:A:C	chr4:127449774:A:C	A	C	A	SOX2_HMG_3	-20	0	+	0	0	.
chr4	127605366	127605367	chr4:127605367:C:A	rs60404814	C	A	G	SOX2_HMG_3	33	0	-	0	0	.
chr4	127857249	127857250	chr4:127857250:T:C	rs143991735	T	C	T	SOX2_HMG_3	5	1	-	4.3764453215021035	-2.532309457813118	ATGCAATGGCATTGGGT
chr4	128309410	128309411	chr4:128309411:C:T	rs117257723	C	T	C	SOX2_HMG_3	-16	0	+	0	0	.
chr4	128386561	128386562	chr4:128386562:A:G	rs7654743	A	G	G	SOX2_HMG_3	-3	0	+	0	0	.
chr4	128590291	128590292	chr4:128590292:A:G	rs1732091	A	G	A	SOX2_HMG_3	-1	0	-	0	0	.
chr4	128590294	128590295	chr4:128590295:C:G	rs1695416	C	G	G	SOX2_HMG_3	-4	0	-	0	0	.
chr4	129153948	129153949	chr4:129153949:A:G	rs11933725	A	G	G	SOX2_HMG_3	21	0	-	0	0	.
chr4	129193692	129193693	chr4:129193693:A:G	rs10518545	A	G	G	SOX2_HMG_3	-10	0	+	0	0	.
chr4	129214963	129214964	chr4:129214964:C:T	rs376379	C	T	T	SOX2_HMG_3	-10	0	+	0	0	.
chr4	129328312	129328313	chr4:129328313:C:A	rs4604071	C	A	A	SOX2_HMG_3	33	0	+	0	0	.
chr4	129498839	129498840	chr4:129498840:A:C	rs599733	A	C	A	SOX2_HMG_3	-16	0	+	0	0	.
chr4	129623452	129623453	chr4:129623453:T:G	rs992693	T	G	G	SOX2_HMG_3	7	1	+	6.7607138532668385	8.805424358000375	CATCAAATGTATTGAGT
chr4	129671701	129671702	chr4:129671702:G:T	rs17050588	G	T	T	SOX2_HMG_3	3	1	-	8.045064061332074	1.1363092820168517	TATCAATGGAATTCAAG
chr4	129944158	129944159	chr4:129944159:G:A	rs186178905	G	A	G	SOX2_HMG_3	-8	0	+	0	0	.
chr4	130073773	130073774	chr4:130073774:A:G	rs2391581	A	G	G	SOX2_HMG_3	33	0	-	0	0	.
chr4	130336432	130336433	chr4:130336433:T:C	rs6534786	T	C	T	SOX2_HMG_3	15	1	+	3.946819448934255	1.1041102927573971	ATTCAATGTTTTTGGTT
chr4	130675596	130675597	chr4:130675597:T:C	rs10006622	T	C	T	SOX2_HMG_3	-6	0	+	0	0	.
chr4	131548172	131548173	chr4:131548173:C:T	rs138718820	C	T	C	SOX2_HMG_3	22	0	-	0	0	.
chr4	132108947	132108948	chr4:132108948:G:C	rs75232366	G	C	G	SOX2_HMG_3	-2	0	-	0	0	.
chr4	132108948	132108949	chr4:132108949:T:A	rs10010474	T	A	T	SOX2_HMG_3	-3	0	-	0	0	.
chr4	132108958	132108959	chr4:132108959:G:A	rs541911541	G	A	G	SOX2_HMG_3	-13	0	-	0	0	.
chr4	132180482	132180483	chr4:132180483:T:C	rs77882680	T	C	T	SOX2_HMG_3	35	0	+	0	0	.
chr4	132614864	132614865	chr4:132614865:G:A	rs1347414	G	A	G	SOX2_HMG_3	23	0	-	0	0	.
chr4	132614877	132614878	chr4:132614878:T:C	rs11099195	T	C	T	SOX2_HMG_3	10	1	-	4.471785167619372	-2.4369696116958486	ATTCAATGGCATTTTTT
chr4	132642645	132642646	chr4:132642646:C:T	rs1025588	C	T	C	SOX2_HMG_3	-3	0	-	0	0	.
chr4	133161811	133161812	chr4:133161812:T:C	rs4605668	T	C	C	SOX2_HMG_3	17	0	+	0	0	.
chr4	133229996	133229997	chr4:133229997:C:T	rs7441703	C	T	C	SOX2_HMG_3	35	0	-	0	0	.
chr4	133659311	133659312	chr4:133659312:A:G	rs2724287	A	G	G	SOX2_HMG_3	-9	0	-	0	0	.
chr4	134200445	134200446	chr4:134200446:C:T	rs10009368	C	T	T	SOX2_HMG_3	25	0	-	0	0	.
chr4	134623246	134623247	chr4:134623247:T:C	rs11945519	T	C	t	SOX2_HMG_3	32	0	-	0	0	.
chr4	134658107	134658108	chr4:134658108:G:A	rs28773473	G	A	G	SOX2_HMG_3	-9	0	+	0	0	.
chr4	134859216	134859217	chr4:134859217:T:G	rs10029269	T	G	T	SOX2_HMG_3	28	0	+	0	0	.
chr4	134910143	134910144	chr4:134910144:G:C	rs79628092	G	C	g	SOX2_HMG_3	16	1	+	2.230964830262322	0.23112233534577853	TGGCTATGCCATTGAGG
chr4	135044992	135044993	chr4:135044993:A:G	rs4530692	A	G	G	SOX2_HMG_3	18	0	-	0	0	.
chr4	135045007	135045008	chr4:135045008:G:A	rs4645267	G	A	G	SOX2_HMG_3	3	1	-	5.182003333596729	-1.7267514457184916	GATCTATGACATTGTGT
chr4	136558713	136558714	chr4:136558714:A:G	rs9683947	A	G	A	SOX2_HMG_3	-4	0	-	0	0	.
chr4	136824428	136824429	chr4:136824429:C:G	rs2612113	C	G	C	SOX2_HMG_3	16	1	-	9.186333900387538	7.186491405470994	TTTCAATTTTATTGTAG
chr4	137068643	137068644	chr4:137068644:C:G	rs4864383	C	G	C	SOX2_HMG_3	-6	0	+	0	0	.
chr4	137379082	137379083	chr4:137379083:G:A	rs4864416	G	A	G	SOX2_HMG_3	-15	0	+	0	0	.
chr4	137390340	137390341	chr4:137390341:A:C	rs756816120	A	C	A	SOX2_HMG_3	32	0	-	0	0	.
chr4	137390340	137390341	chr4:137390341:A:T	chr4:137390341:A:T	A	T	A	SOX2_HMG_3	32	0	-	0	0	.
chr4	137390392	137390393	chr4:137390393:C:T	rs141751870	C	T	C	SOX2_HMG_3	-20	0	-	0	0	.
chr4	137801197	137801198	chr4:137801198:C:T	rs12500644	C	T	C	SOX2_HMG_3	-10	0	+	0	0	.
chr4	138335012	138335013	chr4:138335013:T:C	rs113064243	T	C	T	SOX2_HMG_3	-19	0	-	0	0	.
chr4	138488669	138488670	chr4:138488670:C:T	rs74618087	C	T	C	SOX2_HMG_3	-10	0	-	0	0	.
chr4	138772513	138772514	chr4:138772514:G:T	rs28726321	G	T	G	SOX2_HMG_3	9	1	-	1.221056819015672	0.16915161100598908	GATGACTGGCAGTGAGG
chr4	138907331	138907332	chr4:138907332:G:A	rs55764276	G	A	G	SOX2_HMG_3	0	1	+	7.508371385360505	7.287777106275213	GATCAATAGTACTGATC
chr4	139025493	139025494	chr4:139025494:A:G	rs17050680	A	G	A	SOX2_HMG_3	5	1	+	10.175348616336505	3.2665938370212833	TTCCAATGTTATTGATG
chr4	139461201	139461202	chr4:139461202:G:A	rs35097785	G	A	G	SOX2_HMG_3	33	0	+	0	0	.
chr4	139557706	139557707	chr4:139557707:T:G	rs111580374	T	G	T	SOX2_HMG_3	18	0	+	0	0	.
chr4	139761385	139761386	chr4:139761386:G:C	rs6536444	G	C	-	SOX2_HMG_3	-13	0	-	0	0	.
chr4	139761386	139761387	chr4:139761387:A:G	rs1543067	A	G	G	SOX2_HMG_3	-14	0	-	0	0	.
chr4	139767393	139767394	chr4:139767394:G:A	rs57319093	G	A	G	SOX2_HMG_3	-16	0	-	0	0	.
chr4	140333213	140333214	chr4:140333214:C:T	rs1912963	C	T	T	SOX2_HMG_3	-5	0	-	0	0	.
chr4	140636786	140636787	chr4:140636787:T:C	rs78282365	T	C	T	SOX2_HMG_3	6	1	+	3.840938898876051	-3.0678158804391686	AGCCAATTGAAGTGTTG
chr4	140932285	140932286	chr4:140932286:A:G	rs7658326	A	G	A	SOX2_HMG_3	12	1	-	4.476972295021017	-2.431782484294203	CATTAATGTCAGTGTTC
chr4	141142531	141142532	chr4:141142532:C:A	rs7661472	C	A	A	SOX2_HMG_3	-3	0	-	0	0	.
chr4	141301632	141301633	chr4:141301633:T:G	rs10519590	T	G	T	SOX2_HMG_3	-8	0	-	0	0	.
chr4	141654414	141654415	chr4:141654415:A:C	rs115468796	A	C	A	SOX2_HMG_3	-19	0	-	0	0	.
chr4	142096126	142096127	chr4:142096127:C:T	chr4:142096127:C:T	C	T	C	SOX2_HMG_3	-16	0	-	0	0	.
chr4	142125548	142125549	chr4:142125549:A:C	rs28373344	A	C	C	SOX2_HMG_3	14	1	+	5.954705720292831	-0.8775929852738615	TCTCAATGTCTTTGAAA
chr4	142144026	142144027	chr4:142144027:C:A	rs72718471	C	A	C	SOX2_HMG_3	16	1	-	5.249650860304952	4.446580418528762	GATCAATGTTGTGGATG
chr4	142169898	142169899	chr4:142169899:G:C	rs173045	G	C	G	SOX2_HMG_3	-10	0	+	0	0	.
chr4	142265337	142265338	chr4:142265338:G:A	rs2627828	G	A	A	SOX2_HMG_3	-4	0	+	0	0	.
chr4	142551542	142551543	chr4:142551543:T:C	rs17016354	T	C	T	SOX2_HMG_3	15	1	+	4.00150529944634	1.158796143269481	TTTAAATTTCAGTGATG
chr4	142866855	142866856	chr4:142866856:C:T	rs59762983	C	T	C	SOX2_HMG_3	-15	0	+	0	0	.
chr4	142971098	142971099	chr4:142971099:A:C	rs7692881	A	C	C	SOX2_HMG_3	6	1	-	4.037244780253185	-2.871509999062034	AAGCAATGAGATTGTTT
chr4	143360851	143360852	chr4:143360852:A:G	rs17738628	A	G	A	SOX2_HMG_3	17	0	-	0	0	.
chr4	143726892	143726893	chr4:143726893:T:G	rs1375989	T	G	T	SOX2_HMG_3	-1	0	+	0	0	.
chr4	143921255	143921256	chr4:143921256:G:A	rs532641836	G	A	.	SOX2_HMG_3	-12	0	+	0	0	.
chr4	144451981	144451982	chr4:144451982:A:G	rs17019365	A	G	G	SOX2_HMG_3	4	1	+	3.632847605957767	-3.2759071733574516	CATCAGAGCTATTGATG
chr4	144599858	144599859	chr4:144599859:C:T	rs564086446	C	T	C	SOX2_HMG_3	28	0	+	0	0	.
chr4	144883559	144883560	chr4:144883560:C:T	rs7675454	C	T	C	SOX2_HMG_3	-13	0	+	0	0	.
chr4	145650987	145650988	chr4:145650988:G:A	rs11721510	G	A	A	SOX2_HMG_3	-5	0	+	0	0	.
chr4	145799256	145799257	chr4:145799257:G:A	rs7688506	G	A	G	SOX2_HMG_3	34	0	-	0	0	.
chr4	145847921	145847922	chr4:145847922:G:A	rs1027841	G	A	G	SOX2_HMG_3	-1	0	-	0	0	.
chr4	145940425	145940426	chr4:145940426:C:G	rs62326219	C	G	C	SOX2_HMG_3	-12	0	+	0	0	.
chr4	146175090	146175091	chr4:146175091:C:T	rs72946685	C	T	C	SOX2_HMG_3	25	0	-	0	0	.
chr4	146191342	146191343	chr4:146191343:G:A	rs11100918	G	A	A	SOX2_HMG_3	36	0	+	0	0	.
chr4	146330903	146330904	chr4:146330904:T:C	rs78502390	T	C	C	SOX2_HMG_3	8	1	-	4.339061625006378	5.188105572370008	CAGCAGTGATAGTGATT
chr4	147359848	147359849	chr4:147359849:C:G	rs4593108	C	G	C	SOX2_HMG_3	-14	0	-	0	0	.
chr4	147809489	147809490	chr4:147809490:A:T	rs4835456	A	T	A	SOX2_HMG_3	2	1	-	3.5115308226249424	-0.35608401205309903	GTTGAATTGCAGTGAAG
chr4	147931153	147931154	chr4:147931154:T:G	rs116229698	T	G	T	SOX2_HMG_3	24	0	+	0	0	.
chr4	148088823	148088824	chr4:148088824:C:A	rs6535578	C	A	A	SOX2_HMG_3	33	0	-	0	0	.
chr4	148344660	148344661	chr4:148344661:G:C	rs61761514	G	C	G	SOX2_HMG_3	28	0	-	0	0	.
chr4	148455043	148455044	chr4:148455044:A:G	rs10029199	A	G	a	SOX2_HMG_3	5	1	+	4.299533650807364	-2.6092211285078566	AACCAATGGCAGAGATA
chr4	148455053	148455054	chr4:148455054:T:C	rs7687392	T	C	T	SOX2_HMG_3	15	1	+	4.299533650807364	1.4568244946305056	AACCAATGGCAGAGATA
chr4	148799966	148799967	chr4:148799967:T:C	rs12509344	T	C	C	SOX2_HMG_3	14	1	+	5.536276428296709	1.41675156754431	CATGAATGGCAGTGTTT
chr4	148849880	148849881	chr4:148849881:C:T	rs862657	C	T	T	SOX2_HMG_3	3	1	+	5.315150278915587	-1.5936045003996326	TGACAATAATAGTGAAT
chr4	149203754	149203755	chr4:149203755:T:A	rs10520009	T	A	T	SOX2_HMG_3	24	0	+	0	0	.
chr4	149303685	149303686	chr4:149303686:A:C	rs17624402	A	C	A	SOX2_HMG_3	-12	0	-	0	0	.
chr4	149311437	149311438	chr4:149311438:T:C	rs10019955	T	C	T	SOX2_HMG_3	5	1	-	4.740422813526593	-2.168331965788628	TGCCAATGTAATTGTAT
chr4	149988137	149988138	chr4:149988138:T:C	rs74795267	T	C	T	SOX2_HMG_3	-1	0	-	0	0	.
chr4	150363814	150363815	chr4:150363815:T:C	rs17504324	T	C	t	SOX2_HMG_3	20	0	+	0	0	.
chr4	150363829	150363830	chr4:150363830:G:A	rs7657948	G	A	a	SOX2_HMG_3	35	0	+	0	0	.
chr4	150680931	150680932	chr4:150680932:C:T	rs4336207	C	T	T	SOX2_HMG_3	26	0	+	0	0	.
chr4	150685870	150685871	chr4:150685871:G:A	rs6836017	G	A	A	SOX2_HMG_3	-3	0	+	0	0	.
chr4	150911459	150911460	chr4:150911460:T:C	rs77013479	T	C	T	SOX2_HMG_3	-11	0	+	0	0	.
chr4	150934174	150934175	chr4:150934175:G:A	rs76087649	G	A	G	SOX2_HMG_3	24	0	-	0	0	.
chr4	151307674	151307675	chr4:151307675:T:C	rs17634012	T	C	C	SOX2_HMG_3	-10	0	+	0	0	.
chr4	151389666	151389667	chr4:151389667:T:A	rs116613702	T	A	T	SOX2_HMG_3	10	1	-	3.790907346975773	-3.1178474323394467	GATAAATGCTACTGATT
chr4	151544348	151544349	chr4:151544349:C:T	rs4696094	C	T	C	SOX2_HMG_3	7	1	-	3.759408159453471	1.030621038892136	TCTCACTGTAAGTGAAG
chr4	151544356	151544357	chr4:151544357:C:T	rs6858483	C	T	C	SOX2_HMG_3	-1	0	-	0	0	.
chr4	151668286	151668287	chr4:151668287:G:A	rs6816002	G	A	A	SOX2_HMG_3	-17	0	+	0	0	.
chr4	152025631	152025632	chr4:152025632:C:T	rs187759655	C	T	C	SOX2_HMG_3	-20	0	+	0	0	.
chr4	152089544	152089545	chr4:152089545:T:G	rs11930507	T	G	T	SOX2_HMG_3	-15	0	+	0	0	.
chr4	152264987	152264988	chr4:152264988:G:T	rs57285939	G	T	G	SOX2_HMG_3	26	0	+	0	0	.
chr4	152735485	152735486	chr4:152735486:T:A	rs114613434	T	A	T	SOX2_HMG_3	26	0	+	0	0	.
chr4	153189822	153189823	chr4:153189823:G:A	rs76974256	G	A	G	SOX2_HMG_3	25	0	+	0	0	.
chr4	153197372	153197373	chr4:153197373:G:A	rs6822903	G	A	A	SOX2_HMG_3	-8	0	+	0	0	.
chr4	153524445	153524446	chr4:153524446:T:C	rs12500924	T	C	T	SOX2_HMG_3	24	0	-	0	0	.
chr4	153524454	153524455	chr4:153524455:A:G	rs79860579	A	G	A	SOX2_HMG_3	15	1	-	5.043375980923653	2.200666824746795	AAACAATGTCAGTCATT
chr4	153610884	153610885	chr4:153610885:T:C	rs116245743	T	C	T	SOX2_HMG_3	-18	0	+	0	0	.
chr4	153610894	153610895	chr4:153610895:G:T	rs13135353	G	T	T	SOX2_HMG_3	-8	0	+	0	0	.
chr4	153725841	153725842	chr4:153725842:A:G	rs1530105	A	G	G	SOX2_HMG_3	-6	0	-	0	0	.
chr4	153905108	153905109	chr4:153905109:G:T	rs11942666	G	T	G	SOX2_HMG_3	-13	0	-	0	0	.
chr4	153906477	153906478	chr4:153906478:C:A	rs6831196	C	A	C	SOX2_HMG_3	-11	0	-	0	0	.
chr4	154029047	154029048	chr4:154029048:C:T	rs58229057	C	T	C	SOX2_HMG_3	-6	0	+	0	0	.
chr4	154029057	154029058	chr4:154029058:A:G	rs59388795	A	G	G	SOX2_HMG_3	4	1	+	3.043313168794674	-3.8654416105205454	AACCACTGTCAGTGAGG
chr4	154937166	154937167	chr4:154937167:G:T	rs10024613	G	T	G	SOX2_HMG_3	0	1	+	5.01122438032205	4.1288285005620615	GGTCCATGAAATTGAGT
chr4	155982459	155982460	chr4:155982460:G:T	rs4691200	G	T	G	SOX2_HMG_3	-15	0	-	0	0	.
chr4	156053544	156053545	chr4:156053545:G:A	rs6826026	G	A	A	SOX2_HMG_3	6	1	-	2.9545098999444566	9.863264679259677	GGACAACGGAATTGAAA
chr4	156102448	156102449	chr4:156102449:C:T	rs28626103	C	T	C	SOX2_HMG_3	7	1	-	2.5723714074664414	-0.15641571309489333	GATCAAGGATAGAGATA
chr4	156187137	156187138	chr4:156187138:A:G	rs13115068	A	G	G	SOX2_HMG_3	1	1	+	7.86556558514687	6.033917995067579	TATCAATAACAGTGTGG
chr4	156296005	156296006	chr4:156296006:G:A	rs12233878	G	A	G	SOX2_HMG_3	15	1	+	8.622121874364273	9.054595455915173	TATCAATGATATGGAGG
chr4	156528609	156528610	chr4:156528610:G:A	rs1521704	G	A	G	SOX2_HMG_3	0	1	+	8.020791658421032	7.80019737933574	GATCAATGAAAATGAAA
chr4	156545353	156545354	chr4:156545354:A:G	rs1521710	A	G	A	SOX2_HMG_3	22	0	-	0	0	.
chr4	156619565	156619566	chr4:156619566:C:T	rs6832283	C	T	C	SOX2_HMG_3	-2	0	+	0	0	.
chr4	157665009	157665010	chr4:157665010:C:T	rs2345335	C	T	T	SOX2_HMG_3	25	0	+	0	0	.
chr4	158353746	158353747	chr4:158353747:A:G	rs58794003	A	G	G	SOX2_HMG_3	-10	0	+	0	0	.
chr4	158633311	158633312	chr4:158633312:T:C	rs144210289	T	C	T	SOX2_HMG_3	14	1	+	9.661809548292482	5.542284687540082	CACCAATGGCATTGTTG
chr4	158722992	158722993	chr4:158722993:C:T	rs114501848	C	T	C	SOX2_HMG_3	25	0	-	0	0	.
chr4	158776406	158776407	chr4:158776407:G:T	rs6853442	G	T	G	SOX2_HMG_3	-3	0	-	0	0	.
chr4	158875158	158875159	chr4:158875159:C:G	rs13143943	C	G	C	SOX2_HMG_3	3	1	+	3.3328550992724573	-3.575899680042764	AGTCAATGGCCTTGTCA
chr4	159685202	159685203	chr4:159685203:C:T	rs34975017	C	T	C	SOX2_HMG_3	-6	0	-	0	0	.
chr4	161577537	161577538	chr4:161577538:C:T	rs147442296	C	T	C	SOX2_HMG_3	17	0	-	0	0	.
chr4	161656661	161656662	chr4:161656662:A:G	rs78749316	A	G	A	SOX2_HMG_3	19	0	-	0	0	.
chr4	161658237	161658238	chr4:161658238:C:T	rs116381302	C	T	c	SOX2_HMG_3	-2	0	+	0	0	.
chr4	162457624	162457625	chr4:162457625:T:C	rs11100445	T	C	C	SOX2_HMG_3	28	0	-	0	0	.
chr4	163237706	163237707	chr4:163237707:C:T	rs11732470	C	T	T	SOX2_HMG_3	11	1	-	4.372831120114173	-0.9027804088982234	TGTCAAATTCAGTGATT
chr4	163610380	163610381	chr4:163610381:C:T	rs78361990	C	T	C	SOX2_HMG_3	19	0	-	0	0	.
chr4	164249255	164249256	chr4:164249256:G:A	rs4496540	G	A	A	SOX2_HMG_3	24	0	-	0	0	.
chr4	164309354	164309355	chr4:164309355:A:G	rs77507647	A	G	A	SOX2_HMG_3	-11	0	+	0	0	.
chr4	164444250	164444251	chr4:164444251:T:G	rs1505395	T	G	G	SOX2_HMG_3	-20	0	-	0	0	.
chr4	165215396	165215397	chr4:165215397:G:A	rs59189518	G	A	G	SOX2_HMG_3	15	1	+	4.060910848428425	4.493384429979326	GAGCAATGCTAGTAAGA
chr4	165415229	165415230	chr4:165415230:T:C	rs11736871	T	C	T	SOX2_HMG_3	36	0	+	0	0	.
chr4	166657992	166657993	chr4:166657993:T:C	rs147617648	T	C	c	SOX2_HMG_3	-8	0	+	0	0	.
chr4	167455540	167455541	chr4:167455541:A:G	rs2252437	A	G	g	SOX2_HMG_3	9	1	-	4.613238198584735	3.806568064647689	AAACAATGATATTAAGT
chr4	167887549	167887550	chr4:167887550:G:C	rs113568422	G	C	G	SOX2_HMG_3	-18	0	+	0	0	.
chr4	168506048	168506049	chr4:168506049:A:G	rs12647997	A	G	A	SOX2_HMG_3	11	1	-	3.2721466751829382	-3.4205448230494078	GGGCAAGGCCATTGAAA
chr4	168668062	168668063	chr4:168668063:T:C	rs2723705	T	C	T	SOX2_HMG_3	5	1	-	9.7687397408105	2.859984961495278	AAACAATGTCAGTGTTA
chr4	168923948	168923949	chr4:168923949:A:G	rs1305455010	A	G	A	SOX2_HMG_3	24	0	+	0	0	.
chr4	169052313	169052314	chr4:169052314:C:T	rs17615499	C	T	C	SOX2_HMG_3	20	0	+	0	0	.
chr4	170034216	170034217	chr4:170034217:G:T	rs11728005	G	T	G	SOX2_HMG_3	13	1	+	9.110696136219827	2.2019413569046073	TGTCAATGTGATTGATT
chr4	170066484	170066485	chr4:170066485:A:G	rs1480544	A	G	G	SOX2_HMG_3	-5	0	+	0	0	.
chr4	170672280	170672281	chr4:170672281:C:G	rs7684621	C	G	G	SOX2_HMG_3	-13	0	-	0	0	.
chr4	171289362	171289363	chr4:171289363:C:T	rs72981903	C	T	T	SOX2_HMG_3	-8	0	-	0	0	.
chr4	172401874	172401875	chr4:172401875:G:A	rs335997	G	A	A	SOX2_HMG_3	3	1	-	5.4491201761868355	-1.4596346031283853	GCACAATGCTAGTGGTA
chr4	173273383	173273384	chr4:173273384:A:G	rs74969003	A	G	A	SOX2_HMG_3	-20	0	-	0	0	.
chr4	173685658	173685659	chr4:173685659:C:A	rs75002406	C	A	C	SOX2_HMG_3	-9	0	-	0	0	.
chr4	173878849	173878850	chr4:173878850:G:A	rs79642259	G	A	G	SOX2_HMG_3	14	1	+	2.929318404744177	7.111196022045297	TATCAAAGTCAGTGGGA
chr4	173972510	173972511	chr4:173972511:G:A	rs4075552	G	A	g	SOX2_HMG_3	7	1	+	6.168894405582491	3.4401072850211545	CATCAATGTCAATGTGA
chr4	174018265	174018266	chr4:174018266:T:C	rs7674902	T	C	T	SOX2_HMG_3	-18	0	-	0	0	.
chr4	174128052	174128053	chr4:174128053:G:A	rs58655648	G	A	G	SOX2_HMG_3	-15	0	-	0	0	.
chr4	174153261	174153262	chr4:174153262:A:G	rs12510116	A	G	A	SOX2_HMG_3	34	0	-	0	0	.
chr4	174538336	174538337	chr4:174538337:C:T	rs76365297	C	T	C	SOX2_HMG_3	9	1	+	4.934209831161478	5.740879965098523	CAGCAATGGCCTTGAGG
chr4	174744217	174744218	chr4:174744218:T:C	rs6823566	T	C	t	SOX2_HMG_3	22	0	-	0	0	.
chr4	174744218	174744219	chr4:174744219:G:A	rs76014598	G	A	G	SOX2_HMG_3	21	0	-	0	0	.
chr4	175423142	175423143	chr4:175423143:T:C	rs9994051	T	C	C	SOX2_HMG_3	8	1	-	2.9556383555070065	3.804682302870635	GCTCAAGGACAGTGTTA
chr4	175451617	175451618	chr4:175451618:T:C	rs73013865	T	C	C	SOX2_HMG_3	20	0	+	0	0	.
chr4	175562591	175562592	chr4:175562592:A:T	rs191425438	A	T	A	SOX2_HMG_3	26	0	+	0	0	.
chr4	175705769	175705770	chr4:175705770:T:A	rs74914273	T	A	T	SOX2_HMG_3	6	1	+	6.557041834036873	-0.3517129452783472	AATGAATATTAGTGAAG
chr4	175705788	175705789	chr4:175705789:A:C	rs74652304	A	C	A	SOX2_HMG_3	25	0	+	0	0	.
chr4	175951768	175951769	chr4:175951769:G:A	rs4690647	G	A	G	SOX2_HMG_3	22	0	+	0	0	.
chr4	176013657	176013658	chr4:176013658:G:C	rs34796721	G	C	G	SOX2_HMG_3	11	1	+	3.53525845178372	-1.7403530772286782	GGTCAATGTAAGAGTTT
chr4	176921112	176921113	chr4:176921113:G:T	rs13152811	G	T	G	SOX2_HMG_3	-12	0	+	0	0	.
chr4	177367550	177367551	chr4:177367551:A:G	rs192033210	A	G	A	SOX2_HMG_3	25	0	-	0	0	.
chr4	177811131	177811132	chr4:177811132:T:C	rs1037493	T	C	C	SOX2_HMG_3	18	0	-	0	0	.
chr4	177957969	177957970	chr4:177957970:G:C	rs6826177	G	C	G	SOX2_HMG_3	-18	0	+	0	0	.
chr4	178039914	178039915	chr4:178039915:A:C	rs1023907	A	C	A	SOX2_HMG_3	4	1	+	5.144526503529897	-1.7642282757853234	AAACAAGGTTAGTGAAA
chr4	178224382	178224383	chr4:178224383:C:T	rs112266803	C	T	C	SOX2_HMG_3	-12	0	-	0	0	.
chr4	178480785	178480786	chr4:178480786:G:C	rs4270615	G	C	G	SOX2_HMG_3	36	0	-	0	0	.
chr4	179109351	179109352	chr4:179109352:T:C	rs28868956	T	C	T	SOX2_HMG_3	-9	0	-	0	0	.
chr4	179251335	179251336	chr4:179251336:T:A	rs13128514	T	A	A	SOX2_HMG_3	36	0	-	0	0	.
chr4	179569842	179569843	chr4:179569843:C:T	rs3905711	C	T	C	SOX2_HMG_3	-20	0	-	0	0	.
chr4	179752669	179752670	chr4:179752670:C:T	rs11736914	C	T	T	SOX2_HMG_3	32	0	-	0	0	.
chr4	180160088	180160089	chr4:180160089:A:G	rs10012121	A	G	A	SOX2_HMG_3	6	1	-	5.156887602567208	-1.7518671767480112	AAGCTATGCCATTGAAG
chr4	180409211	180409212	chr4:180409212:A:G	rs4624698	A	G	A	SOX2_HMG_3	28	0	-	0	0	.
chr4	181204434	181204435	chr4:181204435:C:G	chr4:181204435:C:G	C	G	.	SOX2_HMG_3	3	1	+	2.685661002141024	-4.223093777174197	AATCTATGCGATTGAGA
chr4	181361775	181361776	chr4:181361776:G:A	rs17071183	G	A	A	SOX2_HMG_3	-15	0	+	0	0	.
chr4	181996842	181996843	chr4:181996843:G:T	chr4:181996843:G:T	G	T	G	SOX2_HMG_3	7	1	+	11.38967127789177	9.344960773158233	GATCAATGGTAGTGGGA
chr4	181996871	181996872	chr4:181996872:G:C	rs11132102	G	C	C	SOX2_HMG_3	36	0	+	0	0	.
chr4	182276208	182276209	chr4:182276209:A:G	rs144345989	A	G	A	SOX2_HMG_3	-4	0	-	0	0	.
chr4	182538230	182538231	chr4:182538231:T:G	rs4862075	T	G	G	SOX2_HMG_3	31	0	+	0	0	.
chr4	182922775	182922776	chr4:182922776:A:G	rs13119191	A	G	G	SOX2_HMG_3	5	1	+	2.787427760334879	-4.121327018980342	GAGCCATTTCAGTGAAG
chr4	183263985	183263986	chr4:183263986:C:G	rs150185381	C	G	C	SOX2_HMG_3	23	0	-	0	0	.
chr4	183637738	183637739	chr4:183637739:T:C	rs147294550	T	C	T	SOX2_HMG_3	-14	0	+	0	0	.
chr4	183799316	183799317	chr4:183799317:G:A	rs4862253	G	A	A	SOX2_HMG_3	-8	0	-	0	0	.
chr4	183958882	183958883	chr4:183958883:C:T	rs17363675	C	T	C	SOX2_HMG_3	1	1	-	4.753707121307058	6.5853547113863495	CGTCAATATCACTGAAA
chr4	184017935	184017936	chr4:184017936:A:G	rs1970894	A	G	G	SOX2_HMG_3	4	1	+	2.1265345009425514	-4.782220278372669	GATCACTGGGAGTGAAT
chr4	184105223	184105224	chr4:184105224:T:C	rs11132224	T	C	T	SOX2_HMG_3	34	0	+	0	0	.
chr4	184121125	184121126	chr4:184121126:T:A	rs4861600	T	A	A	SOX2_HMG_3	16	1	-	2.593856262425862	2.064473437039944	TGTCAATGGGCTTGATA
chr4	184299161	184299162	chr4:184299162:G:C	rs7672338	G	C	g	SOX2_HMG_3	-11	0	+	0	0	.
chr4	184299208	184299209	chr4:184299209:G:A	rs4862357	G	A	g	SOX2_HMG_3	36	0	+	0	0	.
chr4	184331865	184331866	chr4:184331866:C:T	rs793900	C	T	T	SOX2_HMG_3	-1	0	-	0	0	.
chr4	184424935	184424936	chr4:184424936:A:G	rs10011243	A	G	G	SOX2_HMG_3	15	1	-	3.6399102845917173	0.7972011284148588	GATGAATGTCATGGATT
chr4	184479593	184479594	chr4:184479594:G:A	rs7658103	G	A	A	SOX2_HMG_3	-9	0	+	0	0	.
chr4	184535029	184535030	chr4:184535030:G:T	rs13130427	G	T	G	SOX2_HMG_3	-10	0	+	0	0	.
chr4	184827039	184827040	chr4:184827040:A:G	rs9686055	A	G	G	SOX2_HMG_3	16	1	+	4.922481830583152	5.196169446973423	GTTAAATGCTAGTGAGA
chr4	184827056	184827057	chr4:184827057:C:T	rs540952314	C	T	C	SOX2_HMG_3	33	0	+	0	0	.
chr4	184970279	184970280	chr4:184970280:T:C	rs13108248	T	C	T	SOX2_HMG_3	-8	0	+	0	0	.
chr4	184980375	184980376	chr4:184980376:C:T	rs72706985	C	T	C	SOX2_HMG_3	-4	0	+	0	0	.
chr4	184980724	184980725	chr4:184980725:G:T	rs58635817	G	T	g	SOX2_HMG_3	-5	0	-	0	0	.
chr4	185112979	185112980	chr4:185112980:A:G	rs1872719	A	G	A	SOX2_HMG_3	18	0	-	0	0	.
chr4	185306377	185306378	chr4:185306378:T:G	rs753359	T	G	G	SOX2_HMG_3	26	0	+	0	0	.
chr4	185467188	185467189	chr4:185467189:T:C	rs7677639	T	C	t	SOX2_HMG_3	-17	0	-	0	0	.
chr4	185912888	185912889	chr4:185912889:A:T	rs77636683	A	T	A	SOX2_HMG_3	-20	0	-	0	0	.
chr4	185929049	185929050	chr4:185929050:C:T	rs10013071	C	T	t	SOX2_HMG_3	3	1	+	6.589115894402003	-0.31963888491321857	TCACAATTATAGTGATA
chr4	186012905	186012906	chr4:186012906:C:T	rs75747770	C	T	c	SOX2_HMG_3	0	1	+	5.3424212892167136	5.205092311168049	CATCACTGTTAGTGTGA
chr4	186051129	186051130	chr4:186051130:T:C	rs7686069	T	C	C	SOX2_HMG_3	12	1	+	4.011014623053263	-2.8977401562619582	TATCAATGCAAATGTAT
chr4	186266997	186266998	chr4:186266998:A:C	rs3822057	A	C	A	SOX2_HMG_3	-16	0	+	0	0	.
chr4	186829983	186829984	chr4:186829984:C:T	rs1583218	C	T	C	SOX2_HMG_3	-4	0	-	0	0	.
chr4	186829999	186830000	chr4:186830000:C:T	rs1583219	C	T	C	SOX2_HMG_3	-20	0	-	0	0	.
chr4	187135517	187135518	chr4:187135518:G:A	rs9995596	G	A	A	SOX2_HMG_3	7	1	+	3.6119766119997103	0.8831894914383753	AATCCATGTTAGTCATG
chr4	187151866	187151867	chr4:187151867:T:C	rs6816104	T	C	T	SOX2_HMG_3	2	1	+	7.967057059555726	2.9636849892401385	GTTCAATGATAGTGGAA
chr4	187151873	187151874	chr4:187151874:T:C	rs1532020	T	C	T	SOX2_HMG_3	9	1	+	7.967057059555726	7.160386925618679	GTTCAATGATAGTGGAA
chr4	187289527	187289528	chr4:187289528:T:G	rs34007530	T	G	T	SOX2_HMG_3	-4	0	+	0	0	.
chr4	187289551	187289552	chr4:187289552:A:G	rs28567978	A	G	A	SOX2_HMG_3	20	0	+	0	0	.
chr4	187437615	187437616	chr4:187437616:T:C	rs7688340	T	C	T	SOX2_HMG_3	29	0	+	0	0	.
chr4	187893157	187893158	chr4:187893158:T:C	rs73013391	T	C	C	SOX2_HMG_3	19	0	+	0	0	.
chr4	188429108	188429109	chr4:188429109:T:C	rs62351650	T	C	t	SOX2_HMG_3	21	0	-	0	0	.
chr4	188818214	188818215	chr4:188818215:A:T	rs10004240	A	T	T	SOX2_HMG_3	-5	0	+	0	0	.
chr4	188949913	188949914	chr4:188949914:G:A	rs11946546	G	A	G	SOX2_HMG_3	-10	0	-	0	0	.
chr4	189129541	189129542	chr4:189129542:T:C	rs4623064	T	C	T	SOX2_HMG_3	28	0	+	0	0	.
chr4	189129547	189129548	chr4:189129548:C:A	rs4618357	C	A	A	SOX2_HMG_3	34	0	+	0	0	.
chr4	189255792	189255793	chr4:189255793:G:T	rs7660355	G	T	G	SOX2_HMG_3	-9	0	-	0	0	.
chr4	189341048	189341049	chr4:189341049:C:T	rs34649146	C	T	C	SOX2_HMG_3	-2	0	+	0	0	.
chr4	189375780	189375781	chr4:189375781:T:C	rs114036516	T	C	T	SOX2_HMG_3	-12	0	-	0	0	.
chr4	189476470	189476471	chr4:189476471:C:T	rs1456339	C	T	t	SOX2_HMG_3	0	1	-	3.726921561733016	3.5063272826477223	GGACAATACAATTGGTG
chr4	189552233	189552234	chr4:189552234:G:C	rs4863194	G	C	G	SOX2_HMG_3	7	1	+	6.71541801825226	-0.01742419318371513	TTTCAAGGGTAGTGATG
chr4	189566326	189566327	chr4:189566327:C:A	rs144648900	C	A	C	SOX2_HMG_3	2	1	-	2.315929947550499	6.183544782228541	CTGCAGTGTCAGTGATG
chr4	189720193	189720194	chr4:189720194:A:G	rs540304880	A	G	.	SOX2_HMG_3	6	1	-	7.098897354973652	0.19014257565843096	CATCAATTGAATAGATA
chr5	337869	337870	chr5:337870:A:G	rs7701977	A	G	G	SOX2_HMG_3	36	0	+	0	0	.
chr5	438693	438694	chr5:438694:C:T	rs72717425	C	T	t	SOX2_HMG_3	26	0	-	0	0	.
chr5	442559	442560	chr5:442560:C:T	rs139173233	C	T	C	SOX2_HMG_3	23	0	-	0	0	.
chr5	460757	460758	chr5:460758:C:A	rs190513726	C	A	C	SOX2_HMG_3	-20	0	+	0	0	.
chr5	834745	834746	chr5:834746:C:T	rs11960529	C	T	c	SOX2_HMG_3	26	0	-	0	0	.
chr5	857087	857088	chr5:857088:C:T	rs73018855	C	T	-	SOX2_HMG_3	-3	0	+	0	0	.
chr5	999547	999548	chr5:999548:C:T	rs72705182	C	T	C	SOX2_HMG_3	33	0	-	0	0	.
chr5	1235628	1235629	chr5:1235629:G:A	rs76827400	G	A	G	SOX2_HMG_3	-6	0	+	0	0	.
chr5	1324702	1324703	chr5:1324703:C:A	rs62329693	C	A	C	SOX2_HMG_3	21	0	+	0	0	.
chr5	1442726	1442727	chr5:1442727:C:T	rs13189021	C	T	C	SOX2_HMG_3	-8	0	+	0	0	.
chr5	1693086	1693087	chr5:1693087:G:A	rs10041610	G	A	A	SOX2_HMG_3	17	0	-	0	0	.
chr5	1959636	1959637	chr5:1959637:C:T	rs872807	C	T	t	SOX2_HMG_3	32	0	-	0	0	.
chr5	2335359	2335360	chr5:2335360:A:G	rs2247706	A	G	G	SOX2_HMG_3	18	0	-	0	0	.
chr5	2629280	2629281	chr5:2629281:G:A	rs1444825472	G	A	G	SOX2_HMG_3	8	1	-	4.272790150894033	5.144526503529896	AAGCACTGCTAGTGAAA
chr5	2723951	2723952	chr5:2723952:C:T	rs114846434	C	T	C	SOX2_HMG_3	-17	0	-	0	0	.
chr5	2741278	2741279	chr5:2741279:C:T	rs2962563	C	T	C	SOX2_HMG_3	35	0	-	0	0	.
chr5	2851741	2851742	chr5:2851742:G:A	rs559379	G	A	A	SOX2_HMG_3	0	1	+	8.438888340474584	8.21829406138929	GATCGATTCTATTGATT
chr5	3091621	3091622	chr5:3091622:C:T	rs73039149	C	T	C	SOX2_HMG_3	7	1	-	3.11770342682848	0.3889163062671446	TGTCAAGGACAGTGACA
chr5	3130949	3130950	chr5:3130950:G:A	rs903397	G	A	G	SOX2_HMG_3	-13	0	-	0	0	.
chr5	3251763	3251764	chr5:3251764:C:T	rs62338477	C	T	C	SOX2_HMG_3	36	0	+	0	0	.
chr5	3276887	3276888	chr5:3276888:T:C	rs34035132	T	C	t	SOX2_HMG_3	21	0	-	0	0	.
chr5	3276890	3276891	chr5:3276891:C:G	rs34800353	C	G	c	SOX2_HMG_3	18	0	-	0	0	.
chr5	3276893	3276894	chr5:3276894:C:T	rs78317438	C	T	c	SOX2_HMG_3	15	1	-	5.295509223164173	5.727982804715074	TGTCAGTGCCATTGAGT
chr5	3604563	3604564	chr5:3604564:C:A	rs6867483	C	A	C	SOX2_HMG_3	25	0	-	0	0	.
chr5	3613753	3613754	chr5:3613754:T:A	rs13166650	T	A	T	SOX2_HMG_3	-14	0	-	0	0	.
chr5	3750535	3750536	chr5:3750536:A:G	rs9790954	A	G	A	SOX2_HMG_3	-18	0	-	0	0	.
chr5	4002120	4002121	chr5:4002121:C:T	rs2398651	C	T	C	SOX2_HMG_3	16	1	-	4.418223643673382	4.144536027283111	GTTCAATAATACTGAAG
chr5	4002135	4002136	chr5:4002136:A:C	rs4449537	A	C	C	SOX2_HMG_3	1	1	-	4.418223643673382	5.592619906117408	GTTCAATAATACTGAAG
chr5	4022067	4022068	chr5:4022068:T:G	rs494376	T	G	T	SOX2_HMG_3	19	0	-	0	0	.
chr5	4023005	4023006	chr5:4023006:G:A	rs575298	G	A	A	SOX2_HMG_3	18	0	-	0	0	.
chr5	4204795	4204796	chr5:4204796:C:A	rs7734785	C	A	C	SOX2_HMG_3	-19	0	+	0	0	.
chr5	4533386	4533387	chr5:4533387:G:T	rs7733851	G	T	G	SOX2_HMG_3	-10	0	-	0	0	.
chr5	4921276	4921277	chr5:4921277:A:G	rs1669748	A	G	G	SOX2_HMG_3	-20	0	+	0	0	.
chr5	5928753	5928754	chr5:5928754:G:C	rs1174896	G	C	G	SOX2_HMG_3	-19	0	+	0	0	.
chr5	6358710	6358711	chr5:6358711:C:A	rs553273946	C	A	C	SOX2_HMG_3	-15	0	-	0	0	.
chr5	6673422	6673423	chr5:6673423:C:T	rs28434783	C	T	C	SOX2_HMG_3	-7	0	+	0	0	.
chr5	6702501	6702502	chr5:6702502:C:G	rs61616385	C	G	C	SOX2_HMG_3	26	0	+	0	0	.
chr5	6841893	6841894	chr5:6841894:G:A	rs10053085	G	A	G	SOX2_HMG_3	23	0	-	0	0	.
chr5	6926763	6926764	chr5:6926764:T:C	rs6865631	T	C	T	SOX2_HMG_3	16	1	-	2.509173812780057	2.782861429170328	CAGCAATGCCAGGGAGA
chr5	6926767	6926768	chr5:6926768:C:T	rs7720618	C	T	C	SOX2_HMG_3	12	1	-	2.509173812780057	2.509173812780057	CAGCAATGCCAGGGAGA
chr5	7256777	7256778	chr5:7256778:T:C	rs77527717	T	C	T	SOX2_HMG_3	-17	0	+	0	0	.
chr5	7424460	7424461	chr5:7424461:G:C	rs1490782	G	C	G	SOX2_HMG_3	19	0	-	0	0	.
chr5	7515568	7515569	chr5:7515569:A:G	rs17826546	A	G	G	SOX2_HMG_3	-10	0	-	0	0	.
chr5	7655599	7655600	chr5:7655600:C:T	rs72710480	C	T	c	SOX2_HMG_3	28	0	-	0	0	.
chr5	7667733	7667734	chr5:7667734:G:A	rs78040528	G	A	G	SOX2_HMG_3	17	0	+	0	0	.
chr5	7712407	7712408	chr5:7712408:C:T	rs6883085	C	T	C	SOX2_HMG_3	22	0	+	0	0	.
chr5	7779933	7779934	chr5:7779934:C:T	rs74488857	C	T	C	SOX2_HMG_3	-11	0	-	0	0	.
chr5	8180831	8180832	chr5:8180832:C:G	rs1506122	C	G	G	SOX2_HMG_3	19	0	-	0	0	.
chr5	8291116	8291117	chr5:8291117:C:T	rs6887466	C	T	C	SOX2_HMG_3	21	0	+	0	0	.
chr5	8544069	8544070	chr5:8544070:T:C	rs1700576	T	C	C	SOX2_HMG_3	-9	0	+	0	0	.
chr5	8893365	8893366	chr5:8893366:A:G	rs2963330	A	G	A	SOX2_HMG_3	-7	0	+	0	0	.
chr5	9423721	9423722	chr5:9423722:G:T	rs17258120	G	T	G	SOX2_HMG_3	16	1	+	9.384777902187189	8.581707460410998	GAACAATGCAAGTGAGG
chr5	9971569	9971570	chr5:9971570:T:C	rs73036428	T	C	T	SOX2_HMG_3	-4	0	-	0	0	.
chr5	10040655	10040656	chr5:10040656:C:T	rs314740	C	T	C	SOX2_HMG_3	9	1	+	4.727849305351702	5.534519439288747	AATCAATGACATTTGAG
chr5	10124413	10124414	chr5:10124414:G:T	rs2658099	G	T	G	SOX2_HMG_3	1	1	-	3.561148800711185	6.5671926532345015	TCTCCATGGAATTGTTG
chr5	10336063	10336064	chr5:10336064:G:A	rs75783352	G	A	G	SOX2_HMG_3	16	1	+	5.9249181910295565	5.651230574639285	TGTCAATGTCATTTTTG
chr5	10467144	10467145	chr5:10467145:C:A	rs12520289	C	A	C	SOX2_HMG_3	35	0	+	0	0	.
chr5	10548503	10548504	chr5:10548504:A:T	rs12515831	A	T	A	SOX2_HMG_3	-1	0	+	0	0	.
chr5	10555464	10555465	chr5:10555465:T:A	rs75244661	T	A	T	SOX2_HMG_3	12	1	+	4.838264278990767	-2.0704905003244525	AGTAAATACTATTGAGG
chr5	10579118	10579119	chr5:10579119:G:A	rs140823396	G	A	G	SOX2_HMG_3	-20	0	+	0	0	.
chr5	11043666	11043667	chr5:11043667:T:C	rs7730123	T	C	T	SOX2_HMG_3	-4	0	-	0	0	.
chr5	11310441	11310442	chr5:11310442:C:T	rs258638	C	T	T	SOX2_HMG_3	-18	0	-	0	0	.
chr5	11518907	11518908	chr5:11518908:A:G	rs191877964	A	G	G	SOX2_HMG_3	1	1	-	5.447817921236007	5.447817921236007	ATTCAATGACAGAGATA
chr5	11853512	11853513	chr5:11853513:C:A	rs13173868	C	A	C	SOX2_HMG_3	-4	0	-	0	0	.
chr5	11996554	11996555	chr5:11996555:T:C	rs11738825	T	C	T	SOX2_HMG_3	-3	0	+	0	0	.
chr5	12013754	12013755	chr5:12013755:C:T	rs74860806	C	T	C	SOX2_HMG_3	-2	0	-	0	0	.
chr5	12193302	12193303	chr5:12193303:G:A	rs2968091	G	A	A	SOX2_HMG_3	-18	0	-	0	0	.
chr5	12896644	12896645	chr5:12896645:T:C	rs944535954	T	C	T	SOX2_HMG_3	32	0	+	0	0	.
chr5	13026975	13026976	chr5:13026976:T:C	rs111890809	T	C	t	SOX2_HMG_3	4	1	-	4.178197636740459	-2.730557142574761	TGTCAATCATATTGGTA
chr5	13326302	13326303	chr5:13326303:G:A	rs11739513	G	A	A	SOX2_HMG_3	-10	0	-	0	0	.
chr5	13375356	13375357	chr5:13375357:C:T	rs181256271	C	T	C	SOX2_HMG_3	-4	0	-	0	0	.
chr5	13435965	13435966	chr5:13435966:T:C	rs9312827	T	C	T	SOX2_HMG_3	29	0	+	0	0	.
chr5	13568016	13568017	chr5:13568017:C:T	rs59364960	C	T	C	SOX2_HMG_3	-17	0	-	0	0	.
chr5	14013086	14013087	chr5:14013087:G:A	rs4701593	G	A	G	SOX2_HMG_3	0	1	-	7.793147614800431	7.655818636751769	CACCAATGCTATTGTGA
chr5	14054619	14054620	chr5:14054620:A:G	rs57287421	A	G	A	SOX2_HMG_3	-16	0	-	0	0	.
chr5	14414943	14414944	chr5:14414944:C:G	rs30611	C	G	C	SOX2_HMG_3	-13	0	-	0	0	.
chr5	14498617	14498618	chr5:14498618:G:A	rs26107	G	A	G	SOX2_HMG_3	-11	0	-	0	0	.
chr5	15021965	15021966	chr5:15021966:G:A	rs79249357	G	A	A	SOX2_HMG_3	11	1	+	2.2396738556594316	-3.035937673352967	CCCCAATGTCAGTGGGG
chr5	15576646	15576647	chr5:15576647:T:C	rs9312894	T	C	C	SOX2_HMG_3	27	0	-	0	0	.
chr5	15687606	15687607	chr5:15687607:G:A	rs16867548	G	A	G	SOX2_HMG_3	-18	0	-	0	0	.
chr5	15752894	15752895	chr5:15752895:A:G	rs111366337	A	G	A	SOX2_HMG_3	9	1	-	11.287363694702119	10.480693560765072	GAACAATGATAGTGAAA
chr5	15933459	15933460	chr5:15933460:A:G	rs62348110	A	G	A	SOX2_HMG_3	22	0	-	0	0	.
chr5	16254200	16254201	chr5:16254201:A:G	rs11133838	A	G	A	SOX2_HMG_3	11	1	-	3.6543756507726983	-3.03831584745965	AATCAATTTAATGGTGG
chr5	16453723	16453724	chr5:16453724:T:A	rs26377	T	A	T	SOX2_HMG_3	23	0	+	0	0	.
chr5	16547584	16547585	chr5:16547585:G:A	rs75163716	G	A	G	SOX2_HMG_3	-10	0	-	0	0	.
chr5	16659174	16659175	chr5:16659175:C:A	rs252446	C	A	C	SOX2_HMG_3	30	0	-	0	0	.
chr5	16659216	16659217	chr5:16659217:C:T	rs407524	C	T	T	SOX2_HMG_3	-12	0	-	0	0	.
chr5	16791679	16791680	chr5:16791680:A:G	rs76292825	A	G	A	SOX2_HMG_3	19	0	-	0	0	.
chr5	16871113	16871114	chr5:16871114:G:T	rs253315	G	T	T	SOX2_HMG_3	31	0	+	0	0	.
chr5	16884917	16884918	chr5:16884918:G:C	rs114639400	G	C	G	SOX2_HMG_3	31	0	-	0	0	.
chr5	16884918	16884919	chr5:16884919:G:A	rs10069811	G	A	G	SOX2_HMG_3	30	0	-	0	0	.
chr5	16983027	16983028	chr5:16983028:G:A	rs79522620	G	A	G	SOX2_HMG_3	29	0	+	0	0	.
chr5	17000599	17000600	chr5:17000600:A:G	rs954604	A	G	A	SOX2_HMG_3	11	1	-	4.078526950228207	-2.614164548004139	GGTCAAAATCATTGTTG
chr5	17282786	17282787	chr5:17282787:C:T	rs77499817	C	T	C	SOX2_HMG_3	3	1	+	5.813111209909602	-1.0956435694056192	AATCAATTAAATAGAAG
chr5	17309687	17309688	chr5:17309688:T:C	rs298514	T	C	T	SOX2_HMG_3	12	1	+	4.493766990339135	-2.4149877889760845	CACCAATGTAAATGATA
chr5	17314958	17314959	chr5:17314959:A:G	rs111756914	A	G	A	SOX2_HMG_3	-2	0	+	0	0	.
chr5	18069124	18069125	chr5:18069125:A:G	rs633230	A	G	A	SOX2_HMG_3	-13	0	+	0	0	.
chr5	18069135	18069136	chr5:18069136:T:C	rs633217	T	C	T	SOX2_HMG_3	-2	0	+	0	0	.
chr5	18746193	18746194	chr5:18746194:A:G	rs140423465	A	G	A	SOX2_HMG_3	10	1	+	4.342937903384674	-2.5658168759305466	GATCTATTAAAGTGAAA
chr5	19407735	19407736	chr5:19407736:T:A	rs62351793	T	A	T	SOX2_HMG_3	5	1	-	4.969522287365027	-1.9392324919501938	AATCAATATTACTGGTA
chr5	19565224	19565225	chr5:19565225:A:G	rs347711	A	G	G	SOX2_HMG_3	5	1	+	5.148019363325284	-1.7607354159899358	AATCAATGGTCTTGGGT
chr5	19751471	19751472	chr5:19751472:G:C	rs115580283	G	C	G	SOX2_HMG_3	3	1	-	4.240258700643066	-2.6684960786721543	GATCAATCATAGTGGAA
chr5	19925749	19925750	chr5:19925750:C:T	rs28722858	C	T	C	SOX2_HMG_3	35	0	-	0	0	.
chr5	19925773	19925774	chr5:19925774:C:T	rs11951930	C	T	C	SOX2_HMG_3	11	1	-	3.0826569332348974	-2.1929545957775005	GCTCAATTGTCGTGAGT
chr5	19950985	19950986	chr5:19950986:A:G	rs2089556	A	G	G	SOX2_HMG_3	5	1	+	12.896828101614231	5.988073322299011	GTTCAATGGCAGTGATT
chr5	20283968	20283969	chr5:20283969:T:C	rs11949349	T	C	T	SOX2_HMG_3	-14	0	-	0	0	.
chr5	20575945	20575946	chr5:20575946:G:C	rs181364989	G	C	G	SOX2_HMG_3	-19	0	-	0	0	.
chr5	20779015	20779016	chr5:20779016:A:T	rs28564746	A	T	A	SOX2_HMG_3	26	0	+	0	0	.
chr5	20832829	20832830	chr5:20832830:T:C	rs7443674	T	C	T	SOX2_HMG_3	4	1	-	3.866424476912357	-3.0423303024028643	TCTCAATGTTAGTCTTA
chr5	21160461	21160462	chr5:21160462:C:T	rs371821	C	T	C	SOX2_HMG_3	-12	0	+	0	0	.
chr5	21219446	21219447	chr5:21219447:G:C	rs294711	G	C	C	SOX2_HMG_3	-11	0	+	0	0	.
chr5	22372667	22372668	chr5:22372668:T:C	rs13163688	T	C	T	SOX2_HMG_3	-12	0	-	0	0	.
chr5	22560175	22560176	chr5:22560176:A:C	rs115200211	A	C	A	SOX2_HMG_3	-18	0	-	0	0	.
chr5	23615829	23615830	chr5:23615830:T:A	rs6864635	T	A	t	SOX2_HMG_3	30	0	-	0	0	.
chr5	23951098	23951099	chr5:23951099:A:G	rs10078669	A	G	a	SOX2_HMG_3	16	1	+	8.485763236022667	8.759450852412938	CATCAAAGATATTGAGA
chr5	24486695	24486696	chr5:24486696:C:T	rs1169561	C	T	T	SOX2_HMG_3	-8	0	+	0	0	.
chr5	24870921	24870922	chr5:24870922:A:G	rs1353061	A	G	G	SOX2_HMG_3	1	1	+	7.962183505807557	6.130535915728265	CATCAATGTTAATGAGC
chr5	25478484	25478485	chr5:25478485:G:A	rs17525483	G	A	g	SOX2_HMG_3	-2	0	+	0	0	.
chr5	26803252	26803253	chr5:26803253:C:G	rs62343985	C	G	C	SOX2_HMG_3	7	1	-	5.322462757261898	-1.4103794541740753	AAACAAAGTCATTGAGA
chr5	26882865	26882866	chr5:26882866:C:T	rs76579767	C	T	C	SOX2_HMG_3	35	0	+	0	0	.
chr5	27140943	27140944	chr5:27140944:C:T	rs72737296	C	T	C	SOX2_HMG_3	-19	0	+	0	0	.
chr5	27291984	27291985	chr5:27291985:G:A	rs72729012	G	A	G	SOX2_HMG_3	5	1	+	6.912173535695361	13.820928315010583	GGTCAGTGGCATTGAGT
chr5	28131157	28131158	chr5:28131158:G:A	rs10472602	G	A	A	SOX2_HMG_3	18	0	+	0	0	.
chr5	28808946	28808947	chr5:28808947:T:C	rs2548014	T	C	C	SOX2_HMG_3	15	1	-	3.7802330570587324	3.3477594755078317	GAACAAGGTAAGTGAAG
chr5	28808958	28808959	chr5:28808959:G:T	rs77314822	G	T	G	SOX2_HMG_3	3	1	-	3.7802330570587324	-3.128521722256488	GAACAAGGTAAGTGAAG
chr5	28954340	28954341	chr5:28954341:G:C	rs182611	G	C	G	SOX2_HMG_3	26	0	-	0	0	.
chr5	29002263	29002264	chr5:29002264:T:G	rs36080912	T	G	T	SOX2_HMG_3	-15	0	+	0	0	.
chr5	29633919	29633920	chr5:29633920:G:A	rs9918231	G	A	G	SOX2_HMG_3	24	0	+	0	0	.
chr5	29786916	29786917	chr5:29786917:G:A	rs113719888	G	A	G	SOX2_HMG_3	25	0	-	0	0	.
chr5	29786926	29786927	chr5:29786927:T:A	rs1167472417	T	A	T	SOX2_HMG_3	15	1	-	6.447507586764218	7.682410023480941	GATCAATAGCATGGAAT
chr5	30076207	30076208	chr5:30076208:C:G	rs7735679	C	G	G	SOX2_HMG_3	23	0	+	0	0	.
chr5	30105470	30105471	chr5:30105471:A:G	rs12186990	A	G	G	SOX2_HMG_3	20	0	-	0	0	.
chr5	30602442	30602443	chr5:30602443:C:T	rs17593648	C	T	C	SOX2_HMG_3	11	1	-	3.3180556236323833	-1.957555905380016	AATCAAAATCAGTGAGC
chr5	30997705	30997706	chr5:30997706:A:G	rs1500169	A	G	G	SOX2_HMG_3	27	0	-	0	0	.
chr5	31106027	31106028	chr5:31106028:G:A	rs72747743	G	A	G	SOX2_HMG_3	26	0	+	0	0	.
chr5	31250856	31250857	chr5:31250857:C:T	rs13186740	C	T	T	SOX2_HMG_3	-18	0	+	0	0	.
chr5	32058008	32058009	chr5:32058009:A:G	rs151861	A	G	G	SOX2_HMG_3	24	0	+	0	0	.
chr5	32201296	32201297	chr5:32201297:A:G	rs114048683	A	G	A	SOX2_HMG_3	9	1	-	3.430705860556135	2.62403572661909	AATCAATGCTATTTCTT
chr5	32434339	32434340	chr5:32434340:C:T	rs71629079	C	T	c	SOX2_HMG_3	-6	0	-	0	0	.
chr5	32434348	32434349	chr5:32434349:T:C	rs71629080	T	C	T	SOX2_HMG_3	-15	0	-	0	0	.
chr5	32472002	32472003	chr5:32472003:G:T	rs1807386	G	T	G	SOX2_HMG_3	7	1	+	2.353823131954822	0.3091126272212851	CATAAATGACAGTGGGG
chr5	32483445	32483446	chr5:32483446:T:C	rs111456919	T	C	T	SOX2_HMG_3	33	0	+	0	0	.
chr5	32533240	32533241	chr5:32533241:G:A	rs818541	G	A	A	SOX2_HMG_3	-7	0	+	0	0	.
chr5	32776566	32776567	chr5:32776567:C:T	rs13436551	C	T	C	SOX2_HMG_3	26	0	-	0	0	.
chr5	32790811	32790812	chr5:32790812:G:C	rs73073697	G	C	G	SOX2_HMG_3	29	0	+	0	0	.
chr5	32913855	32913856	chr5:32913856:A:C	rs6896563	A	C	C	SOX2_HMG_3	36	0	-	0	0	.
chr5	33170716	33170717	chr5:33170717:G:A	rs1479644	G	A	G	SOX2_HMG_3	-16	0	-	0	0	.
chr5	33321466	33321467	chr5:33321467:T:C	rs141436925	T	C	T	SOX2_HMG_3	-15	0	+	0	0	.
chr5	33338561	33338562	chr5:33338562:T:C	rs10040888	T	C	C	SOX2_HMG_3	6	1	+	4.5516176449296495	-2.357137134385573	ACTCAATGTTATTCTGG
chr5	33444345	33444346	chr5:33444346:A:C	rs67450756	A	C	C	SOX2_HMG_3	23	0	+	0	0	.
chr5	33680242	33680243	chr5:33680243:G:A	rs35953152	G	A	G	SOX2_HMG_3	13	1	+	3.885763454599773	-3.0229913247154485	AAACAATGTGATTGTGA
chr5	34035503	34035504	chr5:34035504:T:C	rs17583316	T	C	T	SOX2_HMG_3	31	0	+	0	0	.
chr5	34045803	34045804	chr5:34045804:A:G	rs9292520	A	G	.	SOX2_HMG_3	19	0	+	0	0	.
chr5	34523536	34523537	chr5:34523537:C:T	rs4703447	C	T	C	SOX2_HMG_3	30	0	+	0	0	.
chr5	34524313	34524314	chr5:34524314:G:A	rs4505926	G	A	A	SOX2_HMG_3	11	1	+	2.941647394330958	-2.33396413468144	CAGCAAGGCCAGTGAAA
chr5	34563993	34563994	chr5:34563994:C:G	rs75685365	C	G	C	SOX2_HMG_3	26	0	-	0	0	.
chr5	34625162	34625163	chr5:34625163:T:C	rs384751	T	C	T	SOX2_HMG_3	-12	0	-	0	0	.
chr5	34710078	34710079	chr5:34710079:G:A	rs146757107	G	A	G	SOX2_HMG_3	-12	0	+	0	0	.
chr5	35030587	35030588	chr5:35030588:C:T	rs772379272	C	T	C	SOX2_HMG_3	20	0	-	0	0	.
chr5	35210219	35210220	chr5:35210220:C:T	rs34024951	C	T	C	SOX2_HMG_3	-11	0	+	0	0	.
chr5	35342995	35342996	chr5:35342996:G:C	rs2115469	G	C	C	SOX2_HMG_3	-9	0	+	0	0	.
chr5	35824819	35824820	chr5:35824820:T:C	rs2361395	T	C	T	SOX2_HMG_3	6	1	+	3.01636573352273	-3.8923890457924912	GGGCAATGAGAGTGAAA
chr5	35908371	35908372	chr5:35908372:A:G	rs1010599	A	G	A	SOX2_HMG_3	21	0	-	0	0	.
chr5	35908387	35908388	chr5:35908388:T:G	chr5:35908388:T:G	T	G	T	SOX2_HMG_3	5	1	-	2.8372079403260066	-4.071546838989214	CATAAAGGTTATTGAGG
chr5	36038988	36038989	chr5:36038989:G:C	rs4091908	G	C	G	SOX2_HMG_3	-5	0	-	0	0	.
chr5	36235847	36235848	chr5:36235848:T:G	rs115625855	T	G	T	SOX2_HMG_3	-20	0	-	0	0	.
chr5	36361593	36361594	chr5:36361594:G:T	rs4413557	G	T	T	SOX2_HMG_3	-15	0	-	0	0	.
chr5	36624499	36624500	chr5:36624500:T:C	rs11954014	T	C	T	SOX2_HMG_3	21	0	-	0	0	.
chr5	36631388	36631389	chr5:36631389:T:C	rs3733810	T	C	T	SOX2_HMG_3	12	1	+	4.790583584406582	-2.1181711949086393	AAACAACTTTATTGAAG
chr5	37578576	37578577	chr5:37578577:G:A	rs12188314	G	A	G	SOX2_HMG_3	23	0	+	0	0	.
chr5	37604802	37604803	chr5:37604803:G:T	rs1400851	G	T	T	SOX2_HMG_3	6	1	-	4.446580418528763	4.446580418528763	GATCAACGTTATTAATT
chr5	37735746	37735747	chr5:37735747:A:G	rs2910798	A	G	A	SOX2_HMG_3	4	1	+	6.52711907293626	-0.38163570637896116	GGTCACTGTAATTGAGA
chr5	38053036	38053037	chr5:38053037:C:A	rs270539	C	A	C	SOX2_HMG_3	19	0	+	0	0	.
chr5	38151847	38151848	chr5:38151848:T:C	rs4583910	T	C	T	SOX2_HMG_3	5	1	-	5.287289386741543	-1.6214653925736786	CACCAATTGTATTGGGG
chr5	38284605	38284606	chr5:38284606:G:A	rs6871786	G	A	G	SOX2_HMG_3	35	0	-	0	0	.
chr5	38382925	38382926	chr5:38382926:C:A	chr5:38382926:C:A	C	A	C	SOX2_HMG_3	13	1	-	7.205868415901843	0.29711363658662315	GATCAACATCAGTGATG
chr5	38640085	38640086	chr5:38640086:G:A	rs327284	G	A	A	SOX2_HMG_3	-13	0	+	0	0	.
chr5	38642449	38642450	chr5:38642450:G:T	rs327287	G	T	G	SOX2_HMG_3	-19	0	+	0	0	.
chr5	38753346	38753347	chr5:38753347:C:A	rs75845289	C	A	C	SOX2_HMG_3	-8	0	+	0	0	.
chr5	38796526	38796527	chr5:38796527:T:G	rs34518064	T	G	T	SOX2_HMG_3	35	0	+	0	0	.
chr5	38872928	38872929	chr5:38872929:C:A	rs141451503	C	A	A	SOX2_HMG_3	35	0	-	0	0	.
chr5	39052426	39052427	chr5:39052427:G:A	rs140938240	G	A	G	SOX2_HMG_3	35	0	-	0	0	.
chr5	39258289	39258290	chr5:39258290:G:A	rs113741668	G	A	G	SOX2_HMG_3	-13	0	-	0	0	.
chr5	39463094	39463095	chr5:39463095:G:A	rs17335879	G	A	G	SOX2_HMG_3	-7	0	-	0	0	.
chr5	39476685	39476686	chr5:39476686:T:C	rs113286996	T	C	T	SOX2_HMG_3	24	0	+	0	0	.
chr5	39606826	39606827	chr5:39606827:C:T	rs72741790	C	T	A	SOX2_HMG_3	-3	0	+	0	0	.
chr5	39625525	39625526	chr5:39625526:T:A	rs34346322	T	A	T	SOX2_HMG_3	17	0	-	0	0	.
chr5	40046559	40046560	chr5:40046560:T:C	rs2939374	T	C	C	SOX2_HMG_3	5	1	-	7.749379301060253	0.8406245217450321	AGCCAATGAAAGTGATG
chr5	40353688	40353689	chr5:40353689:A:G	rs10044083	A	G	A	SOX2_HMG_3	-13	0	-	0	0	.
chr5	40504245	40504246	chr5:40504246:T:C	rs1157159	T	C	T	SOX2_HMG_3	11	1	+	5.103794265262231	-1.5888972329701163	GAAAAATGCCATTGAAA
chr5	40551375	40551376	chr5:40551376:A:G	rs13160426	A	G	G	SOX2_HMG_3	-1	0	+	0	0	.
chr5	40599183	40599184	chr5:40599184:C:A	rs16870146	C	A	C	SOX2_HMG_3	-15	0	-	0	0	.
chr5	40606191	40606192	chr5:40606192:A:T	rs10473203	A	T	A	SOX2_HMG_3	-10	0	+	0	0	.
chr5	40654368	40654369	chr5:40654369:C:T	rs10043891	C	T	C	SOX2_HMG_3	5	1	-	3.7463394585922125	10.655094237907434	TGTCAGTTGTATTGTTT
chr5	40670717	40670718	chr5:40670718:A:G	rs4599576	A	G	G	SOX2_HMG_3	26	0	-	0	0	.
chr5	40895475	40895476	chr5:40895476:G:T	rs11739984	G	T	G	SOX2_HMG_3	22	0	-	0	0	.
chr5	41334313	41334314	chr5:41334314:C:T	rs72755968	C	T	C	SOX2_HMG_3	21	0	-	0	0	.
chr5	41559586	41559587	chr5:41559587:G:T	rs13157238	G	T	G	SOX2_HMG_3	35	0	-	0	0	.
chr5	41671645	41671646	chr5:41671646:C:G	rs617174	C	G	G	SOX2_HMG_3	-6	0	-	0	0	.
chr5	42426319	42426320	chr5:42426320:C:T	rs369651887	C	T	C	SOX2_HMG_3	-6	0	+	0	0	.
chr5	42778391	42778392	chr5:42778392:T:C	rs562197239	T	C	T	SOX2_HMG_3	18	0	-	0	0	.
chr5	42804012	42804013	chr5:42804013:T:C	rs13168440	T	C	T	SOX2_HMG_3	15	1	-	11.031275023641044	10.598801442090144	AAGCAATGTTATTGTAG
chr5	43258425	43258426	chr5:43258426:A:G	rs10462048	A	G	A	SOX2_HMG_3	-14	0	-	0	0	.
chr5	43363030	43363031	chr5:43363031:G:A	rs10062598	G	A	g	SOX2_HMG_3	-7	0	-	0	0	.
chr5	43521455	43521456	chr5:43521456:A:G	rs28437972	A	G	-	SOX2_HMG_3	33	0	+	0	0	.
chr5	43997792	43997793	chr5:43997793:G:T	rs72748178	G	T	G	SOX2_HMG_3	26	0	-	0	0	.
chr5	44361403	44361404	chr5:44361404:G:A	rs339508	G	A	G	SOX2_HMG_3	2	1	+	5.158191185450231	5.158191185450231	AGGCAATGTCATAGATA
chr5	44542491	44542492	chr5:44542492:A:C	rs13170860	A	C	A	SOX2_HMG_3	17	0	+	0	0	.
chr5	44571111	44571112	chr5:44571112:G:A	rs57607823	G	A	G	SOX2_HMG_3	18	0	-	0	0	.
chr5	44632610	44632611	chr5:44632611:C:T	rs13357090	C	T	C	SOX2_HMG_3	6	1	-	3.29517432654071	3.29517432654071	AAGCAAGTCAATTGATG
chr5	45809704	45809705	chr5:45809705:A:T	rs112129759	A	T	A	SOX2_HMG_3	36	0	-	0	0	.
chr5	49602902	49602903	chr5:49602903:C:G	rs1374481636	C	G	.	SOX2_HMG_3	27	0	+	0	0	.
chr5	49658019	49658020	chr5:49658020:G:C	rs1316647019	G	C	.	SOX2_HMG_3	3	1	-	4.793643885979245	-2.1151108933359755	ATGCAATGGAATTGTGT
chr5	49658038	49658039	chr5:49658039:C:T	rs1248762273	C	T	.	SOX2_HMG_3	-16	0	-	0	0	.
chr5	49658085	49658086	chr5:49658086:A:G	rs1185527466	A	G	.	SOX2_HMG_3	26	0	-	0	0	.
chr5	49658591	49658592	chr5:49658592:T:C	rs1241000913	T	C	.	SOX2_HMG_3	33	0	-	0	0	.
chr5	49658596	49658597	chr5:49658597:C:G	chr5:49658597:C:G	C	G	.	SOX2_HMG_3	28	0	-	0	0	.
chr5	49666525	49666526	chr5:49666526:T:C	chr5:49666526:T:C	T	C	.	SOX2_HMG_3	15	1	-	4.256774664637828	3.824301083086928	GAGCAATGGAATGGAAT
chr5	50622405	50622406	chr5:50622406:T:G	rs191639757	T	G	t	SOX2_HMG_3	14	1	-	3.1430120709523677	-3.689286634614325	GATCAAAGCTCTTGAAG
chr5	50853498	50853499	chr5:50853499:G:A	rs62365519	G	A	G	SOX2_HMG_3	-5	0	-	0	0	.
chr5	50856620	50856621	chr5:50856621:G:A	rs16886818	G	A	G	SOX2_HMG_3	16	1	-	2.4632574581349065	3.6600295112752605	GGGCATTGGAATTGATC
chr5	50856632	50856633	chr5:50856633:T:C	rs27964	T	C	T	SOX2_HMG_3	4	1	-	2.4632574581349065	-4.445497321180312	GGGCATTGGAATTGATC
chr5	50901160	50901161	chr5:50901161:C:T	rs72756179	C	T	C	SOX2_HMG_3	11	1	-	8.697252141482066	3.4216406124696674	ACACAATGTAAGTGATG
chr5	51385197	51385198	chr5:51385198:A:G	rs3811910	A	G	A	SOX2_HMG_3	35	0	+	0	0	.
chr5	52657486	52657487	chr5:52657487:A:G	rs35949279	A	G	A	SOX2_HMG_3	-19	0	-	0	0	.
chr5	52894338	52894339	chr5:52894339:A:G	rs74751838	A	G	A	SOX2_HMG_3	5	1	+	2.7923917553938296	-4.116363023921391	AATCCATGGCAATGAAA
chr5	52909959	52909960	chr5:52909960:G:C	rs3733882	G	C	G	SOX2_HMG_3	32	0	+	0	0	.
chr5	52997890	52997891	chr5:52997891:A:G	rs35238	A	G	G	SOX2_HMG_3	-18	0	-	0	0	.
chr5	53009165	53009166	chr5:53009166:A:G	rs153141	A	G	A	SOX2_HMG_3	-7	0	-	0	0	.
chr5	53439063	53439064	chr5:53439064:G:A	rs75565133	G	A	G	SOX2_HMG_3	-16	0	-	0	0	.
chr5	53560656	53560657	chr5:53560657:A:T	rs73754255	A	T	A	SOX2_HMG_3	-16	0	+	0	0	.
chr5	53560673	53560674	chr5:53560674:G:C	rs2279516	G	C	C	SOX2_HMG_3	1	1	+	9.67380161224773	8.499405349803707	TGTCAATGTCAGTGGTA
chr5	53560699	53560700	chr5:53560700:C:A	chr5:53560700:C:A	C	A	C	SOX2_HMG_3	27	0	+	0	0	.
chr5	53838729	53838730	chr5:53838730:T:C	rs10940344	T	C	T	SOX2_HMG_3	-6	0	+	0	0	.
chr5	54157015	54157016	chr5:54157016:A:G	rs277332	A	G	G	SOX2_HMG_3	1	1	+	4.158014636301605	2.3263670462223143	AAGCAATGATGGTGAAA
chr5	54159311	54159312	chr5:54159312:T:C	rs277326	T	C	T	SOX2_HMG_3	14	1	+	3.9817128696022763	-0.1378119911501221	CATCCATGACAGTGTAA
chr5	54159320	54159321	chr5:54159321:T:C	rs277325	T	C	T	SOX2_HMG_3	23	0	+	0	0	.
chr5	54388093	54388094	chr5:54388094:A:T	rs4865570	A	T	T	SOX2_HMG_3	21	0	-	0	0	.
chr5	54454699	54454700	chr5:54454700:C:A	rs12517462	C	A	C	SOX2_HMG_3	36	0	-	0	0	.
chr5	54458715	54458716	chr5:54458716:G:C	rs72762097	G	C	G	SOX2_HMG_3	-8	0	+	0	0	.
chr5	54537732	54537733	chr5:54537733:A:G	rs11744803	A	G	G	SOX2_HMG_3	12	1	-	7.965788487622731	1.0570337083075108	AGGCAATAGCATTGAAA
chr5	54590484	54590485	chr5:54590485:G:C	rs17626648	G	C	G	SOX2_HMG_3	-13	0	+	0	0	.
chr5	54735382	54735383	chr5:54735383:A:G	rs12516335	A	G	A	SOX2_HMG_3	26	0	-	0	0	.
chr5	54739631	54739632	chr5:54739632:C:T	rs4410612	C	T	C	SOX2_HMG_3	-1	0	-	0	0	.
chr5	54981826	54981827	chr5:54981827:G:A	rs11745146	G	A	G	SOX2_HMG_3	-12	0	-	0	0	.
chr5	55303231	55303232	chr5:55303232:C:T	chr5:55303232:C:T	C	T	C	SOX2_HMG_3	31	0	+	0	0	.
chr5	55351771	55351772	chr5:55351772:A:G	rs10071980	A	G	A	SOX2_HMG_3	22	0	+	0	0	.
chr5	55701502	55701503	chr5:55701503:C:G	rs3846509	C	G	C	SOX2_HMG_3	25	0	-	0	0	.
chr5	55998010	55998011	chr5:55998011:C:T	rs77877240	C	T	C	SOX2_HMG_3	-4	0	-	0	0	.
chr5	56183644	56183645	chr5:56183645:A:C	rs6871908	A	C	C	SOX2_HMG_3	-7	0	+	0	0	.
chr5	56279730	56279731	chr5:56279731:A:C	rs152318	A	C	A	SOX2_HMG_3	35	0	+	0	0	.
chr5	56406632	56406633	chr5:56406633:C:T	rs286012	C	T	C	SOX2_HMG_3	-15	0	+	0	0	.
chr5	56984285	56984286	chr5:56984286:C:G	rs76768919	C	G	C	SOX2_HMG_3	33	0	+	0	0	.
chr5	57095359	57095360	chr5:57095360:A:G	rs111967458	A	G	A	SOX2_HMG_3	31	0	-	0	0	.
chr5	57311617	57311618	chr5:57311618:T:C	rs168848	T	C	C	SOX2_HMG_3	28	0	+	0	0	.
chr5	57818381	57818382	chr5:57818382:G:A	rs7723284	G	A	G	SOX2_HMG_3	32	0	-	0	0	.
chr5	57844543	57844544	chr5:57844544:T:C	rs141265617	T	C	T	SOX2_HMG_3	-17	0	+	0	0	.
chr5	58188770	58188771	chr5:58188771:T:G	rs11739055	T	G	T	SOX2_HMG_3	-12	0	-	0	0	.
chr5	58395502	58395503	chr5:58395503:C:A	rs3846534	C	A	C	SOX2_HMG_3	10	1	-	2.3941509418077302	2.3941509418077302	AATCCATGGCGGTGATA
chr5	58440890	58440891	chr5:58440891:C:G	rs11958495	C	G	C	SOX2_HMG_3	35	0	-	0	0	.
chr5	58501921	58501922	chr5:58501922:A:G	rs77226259	A	G	A	SOX2_HMG_3	-10	0	+	0	0	.
chr5	58796546	58796547	chr5:58796547:T:A	rs10940626	T	A	A	SOX2_HMG_3	6	1	+	4.655067660931336	-2.2536871183838834	AGTCAATGGAAGAGAAT
chr5	58853743	58853744	chr5:58853744:C:T	rs295675	C	T	C	SOX2_HMG_3	3	1	+	5.232178345086206	-1.6765764342290153	CCCCAATGGAAGTGAGG
chr5	58853755	58853756	chr5:58853756:G:A	rs295676	G	A	A	SOX2_HMG_3	15	1	+	5.232178345086206	5.664651926637106	CCCCAATGGAAGTGAGG
chr5	58860862	58860863	chr5:58860863:T:C	rs9292180	T	C	T	SOX2_HMG_3	-10	0	-	0	0	.
chr5	58871888	58871889	chr5:58871889:A:G	rs866594407	A	G	A	SOX2_HMG_3	21	0	+	0	0	.
chr5	59188402	59188403	chr5:59188403:C:T	rs190594545	C	T	C	SOX2_HMG_3	-13	0	+	0	0	.
chr5	59188450	59188451	chr5:59188451:T:C	rs114000296	T	C	T	SOX2_HMG_3	35	0	+	0	0	.
chr5	59666820	59666821	chr5:59666821:T:C	rs184494277	T	C	T	SOX2_HMG_3	34	0	+	0	0	.
chr5	59746050	59746051	chr5:59746051:A:C	rs7709094	A	C	A	SOX2_HMG_3	16	1	+	6.78965657120149	5.063501692675217	AAGCAATATCATTGTGA
chr5	59943817	59943818	chr5:59943818:T:G	rs4476687	T	G	T	SOX2_HMG_3	3	1	-	3.2203986292670383	10.129153408582257	GAAAAATGGTAGTGTTT
chr5	60309147	60309148	chr5:60309148:T:A	rs16877890	T	A	A	SOX2_HMG_3	-15	0	+	0	0	.
chr5	60830474	60830475	chr5:60830475:A:T	rs72757152	A	T	A	SOX2_HMG_3	-6	0	+	0	0	.
chr5	60836056	60836057	chr5:60836057:T:C	rs17332108	T	C	T	SOX2_HMG_3	14	1	+	4.556147526609027	0.4366226658566285	TGTCAACGGTATTGTAT
chr5	60883473	60883474	chr5:60883474:A:G	rs6449509	A	G	g	SOX2_HMG_3	5	1	+	3.62758182092724	-3.2811729583879803	TGTCAATTCTACTGACA
chr5	60883490	60883491	chr5:60883491:T:C	rs6449510	T	C	T	SOX2_HMG_3	0	1	+	7.935772116673903	8.073101094722565	TGTCAATGTTATAGAAA
chr5	60945314	60945315	chr5:60945315:G:A	rs158921	G	A	G	SOX2_HMG_3	16	1	+	4.796336502032833	4.522648885642561	TGTCAAGGGAAGTGAAG
chr5	61002532	61002533	chr5:61002533:A:G	rs290506	A	G	G	SOX2_HMG_3	22	0	+	0	0	.
chr5	61409948	61409949	chr5:61409949:G:A	rs139439044	G	A	G	SOX2_HMG_3	34	0	+	0	0	.
chr5	61633119	61633120	chr5:61633120:C:G	rs9291731	C	G	C	SOX2_HMG_3	19	0	-	0	0	.
chr5	61661307	61661308	chr5:61661308:T:C	rs430637	T	C	T	SOX2_HMG_3	-1	0	-	0	0	.
chr5	62384620	62384621	chr5:62384621:T:C	rs152189	T	C	T	SOX2_HMG_3	11	1	+	3.5942016470330076	-3.0984898511993393	AGCCACTGTTATTGAAA
chr5	62477985	62477986	chr5:62477986:T:G	rs1301064	T	G	T	SOX2_HMG_3	-12	0	-	0	0	.
chr5	62580945	62580946	chr5:62580946:C:T	rs115682516	C	T	C	SOX2_HMG_3	-12	0	+	0	0	.
chr5	62722469	62722470	chr5:62722470:C:T	rs4700506	C	T	C	SOX2_HMG_3	-12	0	+	0	0	.
chr5	63155157	63155158	chr5:63155158:T:C	rs13169796	T	C	T	SOX2_HMG_3	-15	0	+	0	0	.
chr5	63428813	63428814	chr5:63428814:A:G	rs553673985	A	G	A	SOX2_HMG_3	-11	0	-	0	0	.
chr5	65483103	65483104	chr5:65483104:G:A	rs10514987	G	A	G	SOX2_HMG_3	-9	0	-	0	0	.
chr5	65625924	65625925	chr5:65625925:T:C	rs37253	T	C	T	SOX2_HMG_3	-13	0	-	0	0	.
chr5	65835525	65835526	chr5:65835526:C:G	rs71632542	C	G	C	SOX2_HMG_3	21	0	-	0	0	.
chr5	66441132	66441133	chr5:66441133:A:G	rs188072131	A	G	A	SOX2_HMG_3	-7	0	+	0	0	.
chr5	66524917	66524918	chr5:66524918:A:G	rs34567740	A	G	A	SOX2_HMG_3	11	1	-	4.849084124785116	-1.8436073734472307	ACTCAGTTTTATTGAAT
chr5	66539082	66539083	chr5:66539083:C:G	rs7708179	C	G	G	SOX2_HMG_3	-5	0	+	0	0	.
chr5	66933271	66933272	chr5:66933272:T:G	rs72763018	T	G	T	SOX2_HMG_3	-11	0	+	0	0	.
chr5	67063457	67063458	chr5:67063458:T:A	rs77591491	T	A	T	SOX2_HMG_3	15	1	-	12.354902571827393	13.589805008544117	GAACAATGTCATTGAAT
chr5	67095377	67095378	chr5:67095378:C:T	rs114832876	C	T	C	SOX2_HMG_3	0	1	-	9.429618519058838	9.209024239973544	GATCCATATTATTGATG
chr5	67180022	67180023	chr5:67180023:T:A	rs6890674	T	A	A	SOX2_HMG_3	19	0	-	0	0	.
chr5	67378160	67378161	chr5:67378161:C:T	rs930083	C	T	T	SOX2_HMG_3	-16	0	+	0	0	.
chr5	67379961	67379962	chr5:67379962:G:T	rs78383519	G	T	T	SOX2_HMG_3	-9	0	-	0	0	.
chr5	68010925	68010926	chr5:68010926:A:G	rs13358352	A	G	G	SOX2_HMG_3	16	1	-	4.395264979465292	3.1984929263249384	CCTCAATTTCAGTGGGT
chr5	68010947	68010948	chr5:68010948:G:C	rs281441	G	C	G	SOX2_HMG_3	-6	0	-	0	0	.
chr5	68071884	68071885	chr5:68071885:A:G	chr5:68071885:A:G	A	G	A	SOX2_HMG_3	36	0	-	0	0	.
chr5	68149428	68149429	chr5:68149429:A:G	rs78014415	A	G	A	SOX2_HMG_3	21	0	-	0	0	.
chr5	68268890	68268891	chr5:68268891:G:A	rs16897570	G	A	G	SOX2_HMG_3	-13	0	+	0	0	.
chr5	68268902	68268903	chr5:68268903:C:T	rs62355960	C	T	C	SOX2_HMG_3	-1	0	+	0	0	.
chr5	68287042	68287043	chr5:68287043:T:C	rs67913607	T	C	C	SOX2_HMG_3	4	1	-	6.383197209851556	-0.5255575694636636	CCACAATGAAAGTGATT
chr5	68287046	68287047	chr5:68287047:G:A	rs68180970	G	A	G	SOX2_HMG_3	0	1	-	6.383197209851556	6.245868231802891	CCACAATGAAAGTGATT
chr5	68365068	68365069	chr5:68365069:C:T	rs256500	C	T	C	SOX2_HMG_3	17	0	-	0	0	.
chr5	68385406	68385407	chr5:68385407:C:A	rs16897779	C	A	C	SOX2_HMG_3	-19	0	-	0	0	.
chr5	68418418	68418419	chr5:68418419:A:G	rs4976033	A	G	G	SOX2_HMG_3	-9	0	+	0	0	.
chr5	68533668	68533669	chr5:68533669:A:G	rs1363857	A	G	A	SOX2_HMG_3	-12	0	+	0	0	.
chr5	68533670	68533671	chr5:68533671:C:G	rs1363856	C	G	C	SOX2_HMG_3	-10	0	+	0	0	.
chr5	68672986	68672987	chr5:68672987:T:A	rs255246	T	A	A	SOX2_HMG_3	-8	0	-	0	0	.
chr5	68818898	68818899	chr5:68818899:G:A	rs2888407	G	A	A	SOX2_HMG_3	-5	0	-	0	0	.
chr5	69235865	69235866	chr5:69235866:G:A	rs2930949	G	A	A	SOX2_HMG_3	-4	0	-	0	0	.
chr5	71901719	71901720	chr5:71901720:G:A	rs4594836	G	A	G	SOX2_HMG_3	25	0	-	0	0	.
chr5	72014041	72014042	chr5:72014042:G:T	rs1217769	G	T	G	SOX2_HMG_3	27	0	-	0	0	.
chr5	72037225	72037226	chr5:72037226:G:A	rs75125902	G	A	G	SOX2_HMG_3	-15	0	+	0	0	.
chr5	72294699	72294700	chr5:72294700:G:A	rs73127296	G	A	A	SOX2_HMG_3	33	0	+	0	0	.
chr5	72597084	72597085	chr5:72597085:G:A	rs33425	G	A	A	SOX2_HMG_3	11	1	+	5.369292250107316	0.09368072109491726	AGGCAATGAAAGTGTTT
chr5	72752921	72752922	chr5:72752922:C:T	rs16901102	C	T	T	SOX2_HMG_3	-2	0	-	0	0	.
chr5	72850652	72850653	chr5:72850653:A:G	rs34653	A	G	G	SOX2_HMG_3	8	1	-	3.810245812887053	2.93850946025119	CAACATTTTTAGTGATA
chr5	72850671	72850672	chr5:72850672:A:C	rs34654	A	C	A	SOX2_HMG_3	-11	0	-	0	0	.
chr5	73103067	73103068	chr5:73103068:C:T	rs686233	C	T	C	SOX2_HMG_3	-20	0	-	0	0	.
chr5	73229463	73229464	chr5:73229464:T:G	rs115946512	T	G	T	SOX2_HMG_3	-11	0	+	0	0	.
chr5	73417179	73417180	chr5:73417180:A:C	rs55674522	A	C	A	SOX2_HMG_3	-15	0	+	0	0	.
chr5	73420697	73420698	chr5:73420698:T:A	rs2922717	T	A	A	SOX2_HMG_3	-7	0	+	0	0	.
chr5	73546351	73546352	chr5:73546352:A:G	rs819594	A	G	A	SOX2_HMG_3	-15	0	-	0	0	.
chr5	73668122	73668123	chr5:73668123:C:T	rs10805881	C	T	T	SOX2_HMG_3	-16	0	-	0	0	.
chr5	73760616	73760617	chr5:73760617:A:G	rs10942686	A	G	A	SOX2_HMG_3	-4	0	-	0	0	.
chr5	73794113	73794114	chr5:73794114:A:G	rs79395736	A	G	A	SOX2_HMG_3	1	1	+	3.281848085641761	1.45020049556247	AATCAAGGGCATTTATT
chr5	73867439	73867440	chr5:73867440:G:A	rs72772556	G	A	G	SOX2_HMG_3	21	0	-	0	0	.
chr5	74207496	74207497	chr5:74207497:T:C	rs72776400	T	C	T	SOX2_HMG_3	-9	0	+	0	0	.
chr5	74321647	74321648	chr5:74321648:C:T	rs6453049	C	T	T	SOX2_HMG_3	-18	0	+	0	0	.
chr5	74385256	74385257	chr5:74385257:T:C	rs564979	T	C	c	SOX2_HMG_3	9	1	+	5.662051527428396	4.855381393491349	TTTCCATGGTATTGAGT
chr5	74499867	74499868	chr5:74499868:A:G	rs3106284	A	G	A	SOX2_HMG_3	34	0	-	0	0	.
chr5	74671075	74671076	chr5:74671076:G:A	rs6453072	G	A	A	SOX2_HMG_3	5	1	+	5.560761178094286	12.46951595740951	TATCAGTATTATTGTTA
chr5	74799813	74799814	chr5:74799814:C:T	rs12656070	C	T	C	SOX2_HMG_3	19	0	+	0	0	.
chr5	74855510	74855511	chr5:74855511:G:C	rs72764687	G	C	G	SOX2_HMG_3	-18	0	+	0	0	.
chr5	74935048	74935049	chr5:74935049:C:T	rs80204980	C	T	C	SOX2_HMG_3	7	1	-	5.408413488449603	2.679626367888268	CAGAAATGGTATTGATC
chr5	75007270	75007271	chr5:75007271:A:C	rs72768303	A	C	A	SOX2_HMG_3	-5	0	+	0	0	.
chr5	75007293	75007294	chr5:75007294:A:G	rs7731533	A	G	A	SOX2_HMG_3	18	0	+	0	0	.
chr5	75412803	75412804	chr5:75412804:G:C	rs28609217	G	C	C	SOX2_HMG_3	-12	0	+	0	0	.
chr5	75668302	75668303	chr5:75668303:C:T	rs34357	C	T	t	SOX2_HMG_3	-6	0	+	0	0	.
chr5	76086067	76086068	chr5:76086068:C:A	rs28620	C	A	a	SOX2_HMG_3	-14	0	+	0	0	.
chr5	76225774	76225775	chr5:76225775:A:G	rs10059683	A	G	A	SOX2_HMG_3	28	0	-	0	0	.
chr5	76818698	76818699	chr5:76818699:A:G	rs2242989	A	G	G	SOX2_HMG_3	20	0	+	0	0	.
chr5	76831309	76831310	chr5:76831310:G:A	rs2243057	G	A	G	SOX2_HMG_3	-9	0	-	0	0	.
chr5	77262937	77262938	chr5:77262938:A:G	rs72766934	A	G	A	SOX2_HMG_3	-10	0	-	0	0	.
chr5	77501278	77501279	chr5:77501279:T:C	rs6883348	T	C	C	SOX2_HMG_3	14	1	+	2.9158691837100297	-1.203655677042369	GCTCACTGCTAGTGTAG
chr5	77785842	77785843	chr5:77785843:C:T	rs11746827	C	T	C	SOX2_HMG_3	32	0	-	0	0	.
chr5	77785854	77785855	chr5:77785855:C:T	rs254400	C	T	C	SOX2_HMG_3	20	0	-	0	0	.
chr5	78144510	78144511	chr5:78144511:T:C	rs4364371	T	C	T	SOX2_HMG_3	-6	0	-	0	0	.
chr5	78443329	78443330	chr5:78443330:T:C	rs1019803	T	C	C	SOX2_HMG_3	-14	0	+	0	0	.
chr5	78638568	78638569	chr5:78638569:C:T	rs541169012	C	T	C	SOX2_HMG_3	18	0	+	0	0	.
chr5	78638577	78638578	chr5:78638578:G:A	rs76942426	G	A	G	SOX2_HMG_3	27	0	+	0	0	.
chr5	78782005	78782006	chr5:78782006:A:G	rs7721866	A	G	G	SOX2_HMG_3	4	1	+	6.467937969212061	-0.44081681010316	GATCACTGTTATTGGAA
chr5	78958981	78958982	chr5:78958982:C:T	rs7708387	C	T	C	SOX2_HMG_3	-8	0	+	0	0	.
chr5	79238596	79238597	chr5:79238597:A:G	rs371761882	A	G	A	SOX2_HMG_3	1	1	+	6.6046344306197	4.772986840540409	TATTAATGCAATTGAGA
chr5	79812652	79812653	chr5:79812653:T:C	rs13185886	T	C	C	SOX2_HMG_3	-4	0	-	0	0	.
chr5	79990595	79990596	chr5:79990596:C:T	rs61998228	C	T	C	SOX2_HMG_3	35	0	-	0	0	.
chr5	80090280	80090281	chr5:80090281:T:C	rs2438644	T	C	C	SOX2_HMG_3	33	0	+	0	0	.
chr5	80165603	80165604	chr5:80165604:T:C	rs75946551	T	C	T	SOX2_HMG_3	-18	0	+	0	0	.
chr5	80214537	80214538	chr5:80214538:C:T	rs150537783	C	T	C	SOX2_HMG_3	10	1	-	3.6853049278134877	10.594059707128709	CCTCAATTATGGTGATA
chr5	80229485	80229486	chr5:80229486:A:G	rs10041917	A	G	a	SOX2_HMG_3	12	1	-	3.4062600158863674	-3.502494763428853	GTTCAATGTAGGTGAGT
chr5	80291293	80291294	chr5:80291294:A:G	rs28508166	A	G	A	SOX2_HMG_3	20	0	-	0	0	.
chr5	80481536	80481537	chr5:80481537:C:T	rs79961273	C	T	C	SOX2_HMG_3	22	0	+	0	0	.
chr5	80755003	80755004	chr5:80755004:C:T	rs6151761	C	T	C	SOX2_HMG_3	35	0	-	0	0	.
chr5	80755052	80755053	chr5:80755053:C:T	rs1041721047	C	T	C	SOX2_HMG_3	-14	0	-	0	0	.
chr5	81019208	81019209	chr5:81019209:T:G	rs150241884	T	G	T	SOX2_HMG_3	14	1	-	4.948607992262457	-1.8836907133042358	GAATAATGCTATTGAGT
chr5	81525984	81525985	chr5:81525985:T:C	rs78289656	T	C	T	SOX2_HMG_3	-8	0	-	0	0	.
chr5	82587342	82587343	chr5:82587343:T:C	rs1847053	T	C	C	SOX2_HMG_3	11	1	+	4.448966626773067	-2.24372487145928	AGGCAATGATATTCATT
chr5	82633398	82633399	chr5:82633399:C:A	rs35748674	C	A	C	SOX2_HMG_3	15	1	-	4.77588813864638	6.443264156914003	GATTAATAATATTGAGC
chr5	82738866	82738867	chr5:82738867:C:T	rs13176318	C	T	C	SOX2_HMG_3	-13	0	+	0	0	.
chr5	83267451	83267452	chr5:83267452:G:A	rs28360246	G	A	G	SOX2_HMG_3	-5	0	-	0	0	.
chr5	83434108	83434109	chr5:83434109:C:T	rs185356	C	T	T	SOX2_HMG_3	34	0	+	0	0	.
chr5	83720228	83720229	chr5:83720229:A:G	rs2124884	A	G	A	SOX2_HMG_3	-18	0	-	0	0	.
chr5	83918824	83918825	chr5:83918825:C:A	rs4077504	C	A	A	SOX2_HMG_3	-15	0	+	0	0	.
chr5	83924220	83924221	chr5:83924221:C:T	rs35871321	C	T	C	SOX2_HMG_3	17	0	-	0	0	.
chr5	84636150	84636151	chr5:84636151:C:T	rs58203746	C	T	C	SOX2_HMG_3	17	0	-	0	0	.
chr5	84741358	84741359	chr5:84741359:T:C	rs6452578	T	C	T	SOX2_HMG_3	23	0	-	0	0	.
chr5	84741383	84741384	chr5:84741384:T:A	rs6452580	T	A	A	SOX2_HMG_3	-2	0	-	0	0	.
chr5	84879369	84879370	chr5:84879370:T:C	rs6896185	T	C	T	SOX2_HMG_3	-17	0	-	0	0	.
chr5	84961912	84961913	chr5:84961913:G:T	rs1604167	G	T	T	SOX2_HMG_3	35	0	+	0	0	.
chr5	85033825	85033826	chr5:85033826:C:T	rs79776100	C	T	C	SOX2_HMG_3	-16	0	+	0	0	.
chr5	85210822	85210823	chr5:85210823:A:G	rs78299284	A	G	.	SOX2_HMG_3	11	1	-	7.444519674864351	0.7518281766320041	TGTAAATGTTATTGATC
chr5	85210849	85210850	chr5:85210850:C:T	rs4432930	C	T	.	SOX2_HMG_3	-16	0	-	0	0	.
chr5	85938642	85938643	chr5:85938643:G:A	rs7702973	G	A	A	SOX2_HMG_3	-14	0	+	0	0	.
chr5	86305201	86305202	chr5:86305202:C:T	rs866506566	C	T	.	SOX2_HMG_3	-20	0	+	0	0	.
chr5	86619098	86619099	chr5:86619099:T:A	rs971223594	T	A	T	SOX2_HMG_3	30	0	-	0	0	.
chr5	86878446	86878447	chr5:86878447:G:A	rs10054518	G	A	G	SOX2_HMG_3	-12	0	-	0	0	.
chr5	87413228	87413229	chr5:87413229:G:A	rs3093776	G	A	G	SOX2_HMG_3	20	0	-	0	0	.
chr5	87413264	87413265	chr5:87413265:G:A	rs778520849	G	A	G	SOX2_HMG_3	-16	0	-	0	0	.
chr5	89722784	89722785	chr5:89722785:C:T	rs17512887	C	T	C	SOX2_HMG_3	-11	0	+	0	0	.
chr5	90170522	90170523	chr5:90170523:C:A	rs188803715	C	A	C	SOX2_HMG_3	-16	0	+	0	0	.
chr5	90356068	90356069	chr5:90356069:A:T	rs7349826	A	T	A	SOX2_HMG_3	14	1	+	7.857821714643137	5.1450478698288435	AATCAATGAATTTGAAG
chr5	91020672	91020673	chr5:91020673:T:C	rs116624629	T	C	T	SOX2_HMG_3	-8	0	-	0	0	.
chr5	91361525	91361526	chr5:91361526:T:G	rs147259291	T	G	T	SOX2_HMG_3	6	1	+	3.920860078871848	-2.9878947004433734	ATTCAATCTCATTGTGG
chr5	91366915	91366916	chr5:91366916:C:T	rs62376561	C	T	C	SOX2_HMG_3	24	0	-	0	0	.
chr5	91385131	91385132	chr5:91385132:G:A	rs7705465	G	A	G	SOX2_HMG_3	-6	0	+	0	0	.
chr5	91642290	91642291	chr5:91642291:A:G	rs148320994	A	G	A	SOX2_HMG_3	18	0	+	0	0	.
chr5	91813973	91813974	chr5:91813974:C:T	rs2913417	C	T	C	SOX2_HMG_3	1	1	+	4.694390334343236	4.694390334343236	ACTCAATATTATTCAAA
chr5	92308208	92308209	chr5:92308209:A:C	rs4279370	A	C	C	SOX2_HMG_3	-18	0	+	0	0	.
chr5	92329590	92329591	chr5:92329591:A:C	rs12109676	A	C	C	SOX2_HMG_3	-4	0	+	0	0	.
chr5	92719487	92719488	chr5:92719488:C:T	rs258952	C	T	C	SOX2_HMG_3	32	0	-	0	0	.
chr5	93250239	93250240	chr5:93250240:A:G	rs115628076	A	G	A	SOX2_HMG_3	-19	0	-	0	0	.
chr5	93283090	93283091	chr5:93283091:A:G	rs6557075	A	G	G	SOX2_HMG_3	-2	0	-	0	0	.
chr5	93886471	93886472	chr5:93886472:A:G	rs896729	A	G	A	SOX2_HMG_3	21	0	+	0	0	.
chr5	94661180	94661181	chr5:94661181:A:G	rs3947399	A	G	A	SOX2_HMG_3	28	0	+	0	0	.
chr5	94693786	94693787	chr5:94693787:A:G	rs6869588	A	G	A	SOX2_HMG_3	1	1	+	4.305016665550702	2.4733690754714113	GAACAATTTTTTTGAGA
chr5	94850811	94850812	chr5:94850812:C:A	rs159598	C	A	A	SOX2_HMG_3	3	1	+	4.739275506349424	-2.1694792729657966	GATCATTTTAATTGTTT
chr5	94968862	94968863	chr5:94968863:A:G	rs32920	A	G	A	SOX2_HMG_3	-19	0	-	0	0	.
chr5	95241241	95241242	chr5:95241242:G:A	rs17349336	G	A	G	SOX2_HMG_3	17	0	-	0	0	.
chr5	95486787	95486788	chr5:95486788:T:A	rs149966104	T	A	T	SOX2_HMG_3	-14	0	+	0	0	.
chr5	95646671	95646672	chr5:95646672:G:A	rs185090743	G	A	G	SOX2_HMG_3	1	1	+	2.3682938083109857	4.199941398390277	CGGCAATGCCATAGAGG
chr5	95646671	95646672	chr5:95646672:G:C	chr5:95646672:G:C	G	C	G	SOX2_HMG_3	1	1	+	2.3682938083109857	1.193897545866962	CGGCAATGCCATAGAGG
chr5	95646673	95646674	chr5:95646674:C:G	rs566368392	C	G	C	SOX2_HMG_3	3	1	+	2.3682938083109857	-4.540460971004233	CGGCAATGCCATAGAGG
chr5	95646675	95646676	chr5:95646676:A:G	chr5:95646676:A:G	A	G	A	SOX2_HMG_3	5	1	+	2.3682938083109857	-4.540460971004233	CGGCAATGCCATAGAGG
chr5	95698553	95698554	chr5:95698554:C:G	rs153913	C	G	C	SOX2_HMG_3	18	0	+	0	0	.
chr5	95761792	95761793	chr5:95761793:A:C	rs7717280	A	C	C	SOX2_HMG_3	10	1	+	4.246237805292053	-2.662516974023167	GAGTAATTTTATTGATC
chr5	95962750	95962751	chr5:95962751:A:C	rs79358320	A	C	A	SOX2_HMG_3	15	1	-	6.076457722622751	4.4090817043551285	GATCAATGCCAGTTTTA
chr5	96255384	96255385	chr5:96255385:G:A	rs74550156	G	A	G	SOX2_HMG_3	34	0	+	0	0	.
chr5	96563416	96563417	chr5:96563417:T:C	rs2578697	T	C	C	SOX2_HMG_3	20	0	+	0	0	.
chr5	96636083	96636084	chr5:96636084:G:A	rs155059	G	A	A	SOX2_HMG_3	13	1	+	6.5317447871350325	-0.37700999218018794	AATTAATAATAGTGATA
chr5	96701463	96701464	chr5:96701464:T:C	rs147077027	T	C	T	SOX2_HMG_3	7	1	-	3.4629799818127527	6.191767102374087	GATCATTAGTATTGTCA
chr5	96942016	96942017	chr5:96942017:G:A	rs6887500	G	A	G	SOX2_HMG_3	-13	0	+	0	0	.
chr5	97062074	97062075	chr5:97062075:C:T	rs80095180	C	T	C	SOX2_HMG_3	24	0	+	0	0	.
chr5	97062078	97062079	chr5:97062079:G:A	rs74686141	G	A	g	SOX2_HMG_3	28	0	+	0	0	.
chr5	97229575	97229576	chr5:97229576:G:A	rs17630655	G	A	G	SOX2_HMG_3	-12	0	-	0	0	.
chr5	97714656	97714657	chr5:97714657:T:A	rs2115767	T	A	T	SOX2_HMG_3	-2	0	-	0	0	.
chr5	97936398	97936399	chr5:97936399:T:C	rs73776246	T	C	T	SOX2_HMG_3	0	1	+	5.039020208808758	5.176349186857422	TCTCAAAGGAATTGAAG
chr5	97936400	97936401	chr5:97936401:T:G	rs17087923	T	G	T	SOX2_HMG_3	2	1	+	5.039020208808758	1.1714053741307155	TCTCAAAGGAATTGAAG
chr5	98206168	98206169	chr5:98206169:T:C	rs115307902	T	C	T	SOX2_HMG_3	2	1	+	3.8069136286946055	-1.1964584416209814	CATGAATAACAGTGAGG
chr5	98231351	98231352	chr5:98231352:G:C	rs142118300	G	C	c	SOX2_HMG_3	13	1	+	4.617901044964725	-2.2908537343504953	AATTAATGGTATCGATA
chr5	98231355	98231356	chr5:98231356:T:C	rs146209901	T	C	t	SOX2_HMG_3	17	0	+	0	0	.
chr5	98963931	98963932	chr5:98963932:A:C	rs116434398	A	C	a	SOX2_HMG_3	6	1	-	5.793353085394865	-1.115401693920354	GAGCAATGTCAGTTATA
chr5	99178119	99178120	chr5:99178120:T:G	rs10056524	T	G	T	SOX2_HMG_3	-6	0	+	0	0	.
chr5	99895157	99895158	chr5:99895158:G:C	rs113804905	G	C	G	SOX2_HMG_3	8	1	-	3.3542497868076064	4.088518219578806	AATCCTTGCTATTGATT
chr5	99950044	99950045	chr5:99950045:T:G	rs899056	T	G	G	SOX2_HMG_3	35	0	+	0	0	.
chr5	100122565	100122566	chr5:100122566:T:C	rs4429827	T	C	C	SOX2_HMG_3	-14	0	-	0	0	.
chr5	100535182	100535183	chr5:100535183:C:G	rs112231673	C	G	C	SOX2_HMG_3	20	0	-	0	0	.
chr5	100693515	100693516	chr5:100693516:A:T	rs2590424	A	T	T	SOX2_HMG_3	-14	0	+	0	0	.
chr5	100940162	100940163	chr5:100940163:C:T	rs113831677	C	T	c	SOX2_HMG_3	-7	0	-	0	0	.
chr5	101278156	101278157	chr5:101278157:G:C	rs115063285	G	C	G	SOX2_HMG_3	22	0	+	0	0	.
chr5	101531350	101531351	chr5:101531351:G:A	rs350535	G	A	A	SOX2_HMG_3	17	0	-	0	0	.
chr5	102346679	102346680	chr5:102346680:T:C	rs1584716	T	C	T	SOX2_HMG_3	4	1	-	4.8542050800792556	-2.0545496992359644	ACACAATTGCAGTGTTG
chr5	102528738	102528739	chr5:102528739:G:A	rs115282124	G	A	G	SOX2_HMG_3	13	1	+	1.6997160251377552	-5.209038754177465	GGTCATTGACAGTGGAG
chr5	102584150	102584151	chr5:102584151:T:C	rs72781841	T	C	T	SOX2_HMG_3	6	1	+	5.5496806414194175	-1.3590741378958018	CAACAATGGAATGGATG
chr5	102617411	102617412	chr5:102617412:C:T	rs10067699	C	T	T	SOX2_HMG_3	24	0	-	0	0	.
chr5	102747716	102747717	chr5:102747717:T:C	rs419199	T	C	T	SOX2_HMG_3	-4	0	+	0	0	.
chr5	102826880	102826881	chr5:102826881:A:G	chr5:102826881:A:G	A	G	A	SOX2_HMG_3	5	1	+	4.570680195294285	-2.338074584020935	TTTCAATGATATTATTG
chr5	103475922	103475923	chr5:103475923:G:A	rs188347	G	A	A	SOX2_HMG_3	-5	0	-	0	0	.
chr5	103506431	103506432	chr5:103506432:A:G	rs457489	A	G	A	SOX2_HMG_3	36	0	+	0	0	.
chr5	103563122	103563123	chr5:103563123:T:C	rs368798432	T	C	T	SOX2_HMG_3	12	1	+	5.856986341470087	-1.0517684378451337	GTCCAATGCAATTGAGT
chr5	103600730	103600731	chr5:103600731:C:T	rs952497	C	T	T	SOX2_HMG_3	-6	0	+	0	0	.
chr5	103680072	103680073	chr5:103680073:G:T	rs1152169	G	T	T	SOX2_HMG_3	-19	0	-	0	0	.
chr5	103755739	103755740	chr5:103755740:T:C	rs10079375	T	C	.	SOX2_HMG_3	19	0	+	0	0	.
chr5	103778973	103778974	chr5:103778974:A:G	rs149597014	A	G	A	SOX2_HMG_3	-2	0	-	0	0	.
chr5	104147499	104147500	chr5:104147500:A:G	rs139938108	A	G	A	SOX2_HMG_3	28	0	+	0	0	.
chr5	104265540	104265541	chr5:104265541:A:G	rs114044436	A	G	A	SOX2_HMG_3	1	1	-	6.254488055173053	6.254488055173053	ATTCAAGGATAGTGATA
chr5	104327791	104327792	chr5:104327792:C:G	rs142236689	C	G	C	SOX2_HMG_3	8	1	-	3.5774427003140263	2.843174267542826	AAGCAATGGAAATGTTG
chr5	104327818	104327819	chr5:104327819:A:G	rs349599	A	G	A	SOX2_HMG_3	-19	0	-	0	0	.
chr5	104612266	104612267	chr5:104612267:T:C	rs2431108	T	C	T	SOX2_HMG_3	-18	0	+	0	0	.
chr5	105047313	105047314	chr5:105047314:A:T	rs72660759	A	T	A	SOX2_HMG_3	6	1	-	2.3318109390129003	-4.576943840302318	AATAAATGCCAATGAAG
chr5	105155185	105155186	chr5:105155186:C:T	rs10043572	C	T	C	SOX2_HMG_3	-16	0	-	0	0	.
chr5	105448700	105448701	chr5:105448701:T:C	rs10073707	T	C	T	SOX2_HMG_3	-12	0	+	0	0	.
chr5	105632534	105632535	chr5:105632535:C:T	rs10070309	C	T	T	SOX2_HMG_3	13	1	-	3.5075029204574593	-3.4012518588577607	GGTCACTGCTATTGTAC
chr5	105632548	105632549	chr5:105632549:T:C	rs10079505	T	C	T	SOX2_HMG_3	-1	0	-	0	0	.
chr5	106481692	106481693	chr5:106481693:G:A	rs191155580	G	A	G	SOX2_HMG_3	21	0	+	0	0	.
chr5	106543861	106543862	chr5:106543862:C:T	rs6864980	C	T	C	SOX2_HMG_3	35	0	-	0	0	.
chr5	106646355	106646356	chr5:106646356:C:T	rs28510213	C	T	C	SOX2_HMG_3	21	0	-	0	0	.
chr5	106737413	106737414	chr5:106737414:G:A	rs114788490	G	A	G	SOX2_HMG_3	17	0	+	0	0	.
chr5	106875194	106875195	chr5:106875195:G:A	rs78339743	G	A	A	SOX2_HMG_3	26	0	-	0	0	.
chr5	107024180	107024181	chr5:107024181:T:C	rs11749538	T	C	T	SOX2_HMG_3	12	1	+	3.4595337968739917	-3.449220982441229	AATCAATGAAAATGGGG
chr5	107024199	107024200	chr5:107024200:T:C	rs28452951	T	C	T	SOX2_HMG_3	31	0	+	0	0	.
chr5	107172756	107172757	chr5:107172757:G:C	rs12516271	G	C	C	SOX2_HMG_3	-5	0	+	0	0	.
chr5	107264513	107264514	chr5:107264514:G:A	rs34566	G	A	G	SOX2_HMG_3	-18	0	-	0	0	.
chr5	107432401	107432402	chr5:107432402:A:C	rs154647	A	C	A	SOX2_HMG_3	-14	0	-	0	0	.
chr5	107543362	107543363	chr5:107543363:C:T	rs6884705	C	T	C	SOX2_HMG_3	15	1	+	7.015645714575019	9.858354870751878	TTTCAATTTAAGTGACG
chr5	107572733	107572734	chr5:107572734:C:T	rs624548	C	T	T	SOX2_HMG_3	-6	0	-	0	0	.
chr5	107704740	107704741	chr5:107704741:C:T	rs12654281	C	T	C	SOX2_HMG_3	-10	0	-	0	0	.
chr5	107724698	107724699	chr5:107724699:C:T	rs56159505	C	T	-	SOX2_HMG_3	-2	0	-	0	0	.
chr5	107794840	107794841	chr5:107794841:T:A	rs62355926	T	A	T	SOX2_HMG_3	32	0	+	0	0	.
chr5	108101323	108101324	chr5:108101324:C:A	rs10079990	C	A	C	SOX2_HMG_3	8	1	+	3.6259228571646576	3.5111473425722295	GAACAATGCCATGGTTA
chr5	108420452	108420453	chr5:108420453:C:G	rs17161316	C	G	c	SOX2_HMG_3	25	0	-	0	0	.
chr5	108863397	108863398	chr5:108863398:C:T	rs770511444	C	T	C	SOX2_HMG_3	-17	0	+	0	0	.
chr5	109368257	109368258	chr5:109368258:A:G	rs3805438	A	G	A	SOX2_HMG_3	1	1	+	4.883297291915102	3.051649701835811	GAGCAATGACAGTGCTA
chr5	109550365	109550366	chr5:109550366:T:C	rs76984613	T	C	T	SOX2_HMG_3	12	1	+	4.048707420343631	-2.860047358971588	ACTCAATGAAATTTAAT
chr5	109617800	109617801	chr5:109617801:A:C	rs11743954	A	C	A	SOX2_HMG_3	8	1	-	3.648998742489604	3.5115308226249424	GTTCGATTTCAGTGAAG
chr5	109677376	109677377	chr5:109677377:A:G	rs77369281	A	G	A	SOX2_HMG_3	4	1	+	3.623176006967062	-3.2855787723481584	GACCAATATTATGGATT
chr5	109759629	109759630	chr5:109759630:G:A	rs75148706	G	A	G	SOX2_HMG_3	3	1	-	3.0149655339997175	-3.893789245315503	CAGCAATTCTAGTGCTA
chr5	109777886	109777887	chr5:109777887:C:T	rs34595717	C	T	C	SOX2_HMG_3	27	0	-	0	0	.
chr5	109777907	109777908	chr5:109777908:A:G	rs12514321	A	G	A	SOX2_HMG_3	6	1	-	5.03486117117059	-1.8738936081446294	GACCAATAAAAGTGAAT
chr5	109866182	109866183	chr5:109866183:T:C	rs138717648	T	C	T	SOX2_HMG_3	6	1	+	4.036815238599072	-2.8719395407161508	ACTCTATTGTATTGTTG
chr5	109986671	109986672	chr5:109986672:T:C	rs36803	T	C	T	SOX2_HMG_3	19	0	-	0	0	.
chr5	110034716	110034717	chr5:110034717:T:C	rs11241043	T	C	T	SOX2_HMG_3	12	1	+	3.1226000814875454	-3.786154697827675	CTGCAAGGTTAGTGATG
chr5	110738537	110738538	chr5:110738538:A:C	rs72773192	A	C	A	SOX2_HMG_3	19	0	-	0	0	.
chr5	110738540	110738541	chr5:110738541:T:G	rs376247108	T	G	T	SOX2_HMG_3	16	1	-	7.30089514759288	5.5747402690666075	GATCAAATCTATTGAGA
chr5	111158547	111158548	chr5:111158548:G:A	rs9326826	G	A	G	SOX2_HMG_3	13	1	+	2.921230080501639	-3.9875246988135804	AGGCAATGCAAATGATT
chr5	111511332	111511333	chr5:111511333:A:G	rs152877	A	G	A	SOX2_HMG_3	12	1	-	8.951349899330316	2.042595120015094	AATAAATGTTATTGTTA
chr5	111511337	111511338	chr5:111511338:C:T	rs138664285	C	T	C	SOX2_HMG_3	7	1	-	8.951349899330316	6.222562778768979	AATAAATGTTATTGTTA
chr5	111638850	111638851	chr5:111638851:A:G	rs2118697	A	G	A	SOX2_HMG_3	5	1	+	4.42941135419279	-2.479343425122431	ACTCAATGATATGGTTT
chr5	111658207	111658208	chr5:111658208:T:C	rs1904154	T	C	C	SOX2_HMG_3	-14	0	-	0	0	.
chr5	111722146	111722147	chr5:111722147:A:C	rs17842605	A	C	A	SOX2_HMG_3	2	1	-	5.611152617582464	1.743537782904423	AATCAATGACAGAGACA
chr5	111820372	111820373	chr5:111820373:T:C	rs55904450	T	C	T	SOX2_HMG_3	5	1	-	5.685305481401011	-1.2234492979142109	AATCAATACTTGTGAAG
chr5	111893022	111893023	chr5:111893023:A:G	rs115380464	A	G	A	SOX2_HMG_3	36	0	+	0	0	.
chr5	111916397	111916398	chr5:111916398:A:G	rs1493457	A	G	A	SOX2_HMG_3	9	1	-	3.3949907353796074	2.5883206014425606	TGTCAGTGATAGTGACT
chr5	111948539	111948540	chr5:111948540:T:C	rs74863307	T	C	T	SOX2_HMG_3	33	0	+	0	0	.
chr5	112167008	112167009	chr5:112167009:T:C	rs6872947	T	C	T	SOX2_HMG_3	-20	0	-	0	0	.
chr5	112175237	112175238	chr5:112175238:C:T	rs777238202	C	T	C	SOX2_HMG_3	-2	0	-	0	0	.
chr5	112717592	112717593	chr5:112717593:G:A	rs56700193	G	A	G	SOX2_HMG_3	-5	0	+	0	0	.
chr5	112717612	112717613	chr5:112717613:G:A	rs184735912	G	A	G	SOX2_HMG_3	15	1	+	6.3289022726789765	6.761375854229877	TTTCATTGTTATTGAGA
chr5	112779944	112779945	chr5:112779945:A:G	rs77939389	A	G	A	SOX2_HMG_3	30	0	-	0	0	.
chr5	112831889	112831890	chr5:112831890:T:C	rs548710	T	C	T	SOX2_HMG_3	26	0	+	0	0	.
chr5	112870019	112870020	chr5:112870020:T:C	rs79735802	T	C	T	SOX2_HMG_3	-14	0	-	0	0	.
chr5	112884915	112884916	chr5:112884916:A:T	rs818428	A	T	T	SOX2_HMG_3	-6	0	+	0	0	.
chr5	112910755	112910756	chr5:112910756:C:A	rs17135168	C	A	C	SOX2_HMG_3	17	0	-	0	0	.
chr5	112958776	112958777	chr5:112958777:G:A	rs469675	G	A	A	SOX2_HMG_3	-10	0	+	0	0	.
chr5	112983414	112983415	chr5:112983415:T:A	rs33549	T	A	t	SOX2_HMG_3	32	0	+	0	0	.
chr5	113020951	113020952	chr5:113020952:G:A	rs7670	G	A	g	SOX2_HMG_3	-9	0	-	0	0	.
chr5	113098768	113098769	chr5:113098769:G:A	rs3890775	G	A	A	SOX2_HMG_3	-6	0	-	0	0	.
chr5	113177347	113177348	chr5:113177348:T:C	rs17135393	T	C	C	SOX2_HMG_3	0	1	-	5.1732395146451555	5.393833793730449	AGTCAATGTTAGTCTTT
chr5	113203395	113203396	chr5:113203396:T:C	rs57948635	T	C	C	SOX2_HMG_3	20	0	-	0	0	.
chr5	113203431	113203432	chr5:113203432:G:A	rs10478114	G	A	G	SOX2_HMG_3	-16	0	-	0	0	.
chr5	113203432	113203433	chr5:113203433:T:C	rs57602920	T	C	T	SOX2_HMG_3	-17	0	-	0	0	.
chr5	113372091	113372092	chr5:113372092:C:T	rs12516418	C	T	C	SOX2_HMG_3	3	1	+	7.164944640728663	0.2561898614134433	GAACAATTTCATTGTGT
chr5	113546807	113546808	chr5:113546808:A:G	rs116784303	A	G	C	SOX2_HMG_3	30	0	-	0	0	.
chr5	113645830	113645831	chr5:113645831:C:A	rs12189067	C	A	C	SOX2_HMG_3	23	0	+	0	0	.
chr5	113738852	113738853	chr5:113738853:C:T	rs73250331	C	T	C	SOX2_HMG_3	17	0	-	0	0	.
chr5	113813913	113813914	chr5:113813914:C:T	rs12520281	C	T	C	SOX2_HMG_3	13	1	-	10.630672382244677	3.7219176029294583	AATCAATGGAATTGGAT
chr5	114360312	114360313	chr5:114360313:G:T	rs36944	G	T	T	SOX2_HMG_3	36	0	+	0	0	.
chr5	114372143	114372144	chr5:114372144:A:G	rs181949	A	G	A	SOX2_HMG_3	24	0	+	0	0	.
chr5	115179959	115179960	chr5:115179960:C:T	rs11955164	C	T	C	SOX2_HMG_3	21	0	-	0	0	.
chr5	115474070	115474071	chr5:115474071:G:A	rs257059	G	A	A	SOX2_HMG_3	30	0	+	0	0	.
chr5	115492053	115492054	chr5:115492054:T:C	rs10463671	T	C	T	SOX2_HMG_3	10	1	-	7.583149231607893	0.6743944522926715	AGACAATTTCATTGTTG
chr5	115501869	115501870	chr5:115501870:G:A	rs181598906	G	A	G	SOX2_HMG_3	24	0	-	0	0	.
chr5	115661792	115661793	chr5:115661793:G:A	rs73782741	G	A	G	SOX2_HMG_3	-1	0	-	0	0	.
chr5	115938538	115938539	chr5:115938539:T:C	rs17138436	T	C	T	SOX2_HMG_3	1	1	-	3.062941437704333	1.231293847625043	AATCAAATGTACTGATG
chr5	115961242	115961243	chr5:115961243:C:G	rs7704899	C	G	G	SOX2_HMG_3	8	1	+	2.3188395869251	3.0531080196963005	CCTCATTGCAAGTGAGA
chr5	115961247	115961248	chr5:115961248:G:C	rs12516208	G	C	G	SOX2_HMG_3	13	1	+	2.3188395869251	-4.58991519239012	CCTCATTGCAAGTGAGA
chr5	116256884	116256885	chr5:116256885:C:T	rs10073364	C	T	C	SOX2_HMG_3	2	1	-	4.335461932845522	4.335461932845522	CAGGAATGACAGTGATG
chr5	116514086	116514087	chr5:116514087:C:T	rs112557435	C	T	T	SOX2_HMG_3	19	0	+	0	0	.
chr5	116611427	116611428	chr5:116611428:A:G	rs12521940	A	G	A	SOX2_HMG_3	-14	0	-	0	0	.
chr5	116626599	116626600	chr5:116626600:A:C	chr5:116626600:A:C	A	C	A	SOX2_HMG_3	12	1	-	6.059151872219616	-0.8496029070956046	CATCAGTGGAAGTGAGA
chr5	116626615	116626616	chr5:116626616:C:G	rs116589625	C	G	C	SOX2_HMG_3	-4	0	-	0	0	.
chr5	116860333	116860334	chr5:116860334:T:C	rs10043907	T	C	T	SOX2_HMG_3	-2	0	-	0	0	.
chr5	117244698	117244699	chr5:117244699:A:G	rs73783751	A	G	A	SOX2_HMG_3	-7	0	+	0	0	.
chr5	117364560	117364561	chr5:117364561:G:A	rs10055981	G	A	A	SOX2_HMG_3	-9	0	+	0	0	.
chr5	117473627	117473628	chr5:117473628:C:A	rs2162748	C	A	C	SOX2_HMG_3	32	0	-	0	0	.
chr5	117953736	117953737	chr5:117953737:G:C	rs10070124	G	C	G	SOX2_HMG_3	8	1	+	5.09182696072802	4.35755852795682	GTTCAATGGCTTTGACA
chr5	118235203	118235204	chr5:118235204:C:T	rs11742447	C	T	T	SOX2_HMG_3	-19	0	+	0	0	.
chr5	118390959	118390960	chr5:118390960:A:G	rs78999039	A	G	A	SOX2_HMG_3	5	1	+	6.333872659241576	-0.5748821200736451	GATCAATTGAAATGATC
chr5	118392947	118392948	chr5:118392948:T:G	rs7721374	T	G	G	SOX2_HMG_3	-9	0	+	0	0	.
chr5	118530070	118530071	chr5:118530071:T:C	rs10478395	T	C	C	SOX2_HMG_3	-8	0	-	0	0	.
chr5	118530265	118530266	chr5:118530266:T:C	rs35353031	T	C	T	SOX2_HMG_3	-20	0	+	0	0	.
chr5	119050081	119050082	chr5:119050082:C:G	rs11954738	C	G	G	SOX2_HMG_3	-4	0	+	0	0	.
chr5	119050082	119050083	chr5:119050083:T:A	rs11958239	T	A	A	SOX2_HMG_3	-3	0	+	0	0	.
chr5	119288494	119288495	chr5:119288495:G:A	rs905831	G	A	A	SOX2_HMG_3	30	0	+	0	0	.
chr5	119625678	119625679	chr5:119625679:G:A	rs2561513	G	A	G	SOX2_HMG_3	13	1	+	5.540693534997511	-1.3680612443177096	CATCAATGTTAGCGGTA
chr5	119680857	119680858	chr5:119680858:A:T	rs61744859	A	T	A	SOX2_HMG_3	-12	0	-	0	0	.
chr5	119681212	119681213	chr5:119681213:T:C	rs874886	T	C	T	SOX2_HMG_3	1	1	-	8.350339737533243	6.518692147453953	TATCATTGTTAGTGAAA
chr5	119975076	119975077	chr5:119975077:G:A	rs58296627	G	A	G	SOX2_HMG_3	9	1	-	4.496389584775536	5.303059718712583	TGACAAGGTCATTGATA
chr5	119987128	119987129	chr5:119987129:G:A	rs4540207	G	A	G	SOX2_HMG_3	18	0	-	0	0	.
chr5	120039464	120039465	chr5:120039465:C:G	rs5002564	C	G	G	SOX2_HMG_3	32	0	+	0	0	.
chr5	120139209	120139210	chr5:120139210:C:T	rs79866854	C	T	C	SOX2_HMG_3	26	0	-	0	0	.
chr5	120227128	120227129	chr5:120227129:C:T	rs12719272	C	T	C	SOX2_HMG_3	-16	0	+	0	0	.
chr5	120396166	120396167	chr5:120396167:T:C	rs1368190	T	C	T	SOX2_HMG_3	26	0	-	0	0	.
chr5	120452578	120452579	chr5:120452579:G:A	rs1432461	G	A	A	SOX2_HMG_3	28	0	+	0	0	.
chr5	120823317	120823318	chr5:120823318:T:C	rs12523326	T	C	T	SOX2_HMG_3	24	0	+	0	0	.
chr5	120872469	120872470	chr5:120872470:C:T	rs9327170	C	T	C	SOX2_HMG_3	33	0	-	0	0	.
chr5	120872496	120872497	chr5:120872497:A:G	rs6878559	A	G	G	SOX2_HMG_3	6	1	-	4.399664683517514	-2.5090900957977054	GAACAATGTCAGAGAGG
chr5	120891932	120891933	chr5:120891933:T:C	rs75135235	T	C	T	SOX2_HMG_3	5	1	-	3.2664548952052854	-3.6422998841099345	CCCCAATGGTATGGATG
chr5	121402489	121402490	chr5:121402490:T:C	rs711416	T	C	C	SOX2_HMG_3	-1	0	-	0	0	.
chr5	121433312	121433313	chr5:121433313:C:T	rs13181819	C	T	T	SOX2_HMG_3	32	0	+	0	0	.
chr5	121623830	121623831	chr5:121623831:C:T	rs13154018	C	T	T	SOX2_HMG_3	26	0	+	0	0	.
chr5	122126453	122126454	chr5:122126454:T:G	rs1991451	T	G	G	SOX2_HMG_3	-5	0	-	0	0	.
chr5	122190391	122190392	chr5:122190392:C:A	rs144914388	C	A	C	SOX2_HMG_3	20	0	-	0	0	.
chr5	122907028	122907029	chr5:122907029:C:T	rs112801206	C	T	C	SOX2_HMG_3	1	1	-	8.068190891962676	9.899838482041966	AGTCAATGTTATTCAAT
chr5	122907036	122907037	chr5:122907037:G:T	rs34844238	G	T	G	SOX2_HMG_3	-7	0	-	0	0	.
chr5	123199837	123199838	chr5:123199838:G:A	rs804722	G	A	G	SOX2_HMG_3	-13	0	-	0	0	.
chr5	123304241	123304242	chr5:123304242:G:A	rs6595437	G	A	A	SOX2_HMG_3	21	0	+	0	0	.
chr5	123422472	123422473	chr5:123422473:A:T	rs62377766	A	T	A	SOX2_HMG_3	-17	0	-	0	0	.
chr5	124154931	124154932	chr5:124154932:C:T	rs12108901	C	T	C	SOX2_HMG_3	8	1	+	10.307575975931574	11.179312328567436	AAACAATGCAATTGAGA
chr5	124154934	124154935	chr5:124154935:T:G	rs1457687	T	G	g	SOX2_HMG_3	11	1	+	10.307575975931574	8.890496006711624	AAACAATGCAATTGAGA
chr5	124172839	124172840	chr5:124172840:T:C	rs74323401	T	C	T	SOX2_HMG_3	4	1	-	6.555828245881557	-0.35292653343366387	CATCATTTCTATTGAGA
chr5	124376508	124376509	chr5:124376509:G:C	rs11241737	G	C	C	SOX2_HMG_3	1	1	-	4.1286634562685585	5.303059718712583	TCGCAATGTTATTTATA
chr5	124552512	124552513	chr5:124552513:A:G	rs13181595	A	G	A	SOX2_HMG_3	30	0	+	0	0	.
chr5	124839479	124839480	chr5:124839480:A:G	rs75439582	A	G	A	SOX2_HMG_3	24	0	+	0	0	.
chr5	125268162	125268163	chr5:125268163:A:T	rs17152529	A	T	A	SOX2_HMG_3	8	1	+	7.151660516701965	8.138172383930257	AATCGATGAAATTGAGA
chr5	125295227	125295228	chr5:125295228:A:G	rs11747033	A	G	G	SOX2_HMG_3	21	0	-	0	0	.
chr5	125311846	125311847	chr5:125311847:A:T	rs1550371	A	T	T	SOX2_HMG_3	6	1	-	3.6695321403831276	-3.2392226389320937	ATTCCATGTCATTGGTA
chr5	125326160	125326161	chr5:125326161:A:G	rs146365504	A	G	A	SOX2_HMG_3	6	1	-	4.274615100076003	-2.634139679239217	AGTGAATGAAATTGTTA
chr5	125327821	125327822	chr5:125327822:G:A	rs7714653	G	A	G	SOX2_HMG_3	-11	0	+	0	0	.
chr5	125418810	125418811	chr5:125418811:T:C	rs62374736	T	C	T	SOX2_HMG_3	32	0	+	0	0	.
chr5	125599247	125599248	chr5:125599248:G:A	rs536866736	G	A	G	SOX2_HMG_3	-17	0	+	0	0	.
chr5	126140348	126140349	chr5:126140349:C:T	rs573149988	C	T	C	SOX2_HMG_3	25	0	-	0	0	.
chr5	126326799	126326800	chr5:126326800:G:A	rs62391831	G	A	G	SOX2_HMG_3	-12	0	-	0	0	.
chr5	126353271	126353272	chr5:126353272:G:A	rs77820934	G	A	g	SOX2_HMG_3	-5	0	+	0	0	.
chr5	126374216	126374217	chr5:126374217:T:C	rs10078989	T	C	C	SOX2_HMG_3	22	0	-	0	0	.
chr5	126462580	126462581	chr5:126462581:A:G	rs6862440	A	G	A	SOX2_HMG_3	15	1	-	7.362779478092378	4.52007032191552	GTTCAATGATATGGATT
chr5	126516419	126516420	chr5:126516420:C:A	rs114776225	C	A	C	SOX2_HMG_3	-13	0	-	0	0	.
chr5	126694534	126694535	chr5:126694535:A:G	rs35447413	A	G	A	SOX2_HMG_3	14	1	-	3.9301773413414582	-0.1893475194109404	ATTAAATGCTAGTGTTG
chr5	126939897	126939898	chr5:126939898:C:T	rs10900789	C	T	T	SOX2_HMG_3	-19	0	-	0	0	.
chr5	126951581	126951582	chr5:126951582:G:A	rs10491284	G	A	G	SOX2_HMG_3	-2	0	+	0	0	.
chr5	127193156	127193157	chr5:127193157:G:T	rs193712	G	T	G	SOX2_HMG_3	24	0	-	0	0	.
chr5	127393004	127393005	chr5:127393005:G:T	rs1529467	G	T	G	SOX2_HMG_3	22	0	-	0	0	.
chr5	127556881	127556882	chr5:127556882:C:A	rs449278	C	A	C	SOX2_HMG_3	-13	0	+	0	0	.
chr5	127813469	127813470	chr5:127813470:T:A	rs790476	T	A	A	SOX2_HMG_3	-5	0	+	0	0	.
chr5	127888740	127888741	chr5:127888741:C:T	rs245172	C	T	c	SOX2_HMG_3	32	0	+	0	0	.
chr5	128062386	128062387	chr5:128062387:C:G	rs755090899	C	G	C	SOX2_HMG_3	7	1	-	3.2232756742178403	-3.509566537218134	GTTCAACGGCATTGGTT
chr5	128085547	128085548	chr5:128085548:A:G	rs770750751	A	G	A	SOX2_HMG_3	5	1	+	5.045910647652201	-1.8628441316630189	GTTCAATGTCACTGTTT
chr5	128499618	128499619	chr5:128499619:C:T	rs4836376	C	T	T	SOX2_HMG_3	8	1	-	5.775036687578708	4.925992740215079	TGTCAACAGTATTGATT
chr5	128597263	128597264	chr5:128597264:A:C	rs34912177	A	C	C	SOX2_HMG_3	22	0	+	0	0	.
chr5	128646034	128646035	chr5:128646035:A:G	rs4351202	A	G	G	SOX2_HMG_3	0	1	+	4.942638750222612	5.163233029307905	AATCAATTCAAGTCATT
chr5	128926099	128926100	chr5:128926100:C:T	rs114235594	C	T	C	SOX2_HMG_3	-15	0	+	0	0	.
chr5	128962743	128962744	chr5:128962744:G:T	rs6888634	G	T	G	SOX2_HMG_3	20	0	-	0	0	.
chr5	129320892	129320893	chr5:129320893:A:C	rs34517611	A	C	C	SOX2_HMG_3	35	0	+	0	0	.
chr5	129615734	129615735	chr5:129615735:T:C	rs1946290	T	C	T	SOX2_HMG_3	-20	0	+	0	0	.
chr5	129853248	129853249	chr5:129853249:T:A	rs77129189	T	A	T	SOX2_HMG_3	5	1	-	3.873802768507913	-3.0349520108073094	TTTCGATATTATTGAGG
chr5	131281367	131281368	chr5:131281368:A:G	rs556181975	A	G	A	SOX2_HMG_3	36	0	+	0	0	.
chr5	131583451	131583452	chr5:131583452:G:C	chr5:131583452:G:C	G	C	G	SOX2_HMG_3	-3	0	-	0	0	.
chr5	131654690	131654691	chr5:131654691:T:C	rs26003	T	C	T	SOX2_HMG_3	-2	0	+	0	0	.
chr5	132387133	132387134	chr5:132387134:A:G	rs77300588	A	G	A	SOX2_HMG_3	28	0	+	0	0	.
chr5	132972260	132972261	chr5:132972261:C:T	rs12234077	C	T	T	SOX2_HMG_3	-20	0	+	0	0	.
chr5	133106570	133106571	chr5:133106571:T:C	rs56083805	T	C	t	SOX2_HMG_3	4	1	-	4.7374902471016025	-2.171264532213619	GAACATTTTTATTGAAA
chr5	133203790	133203791	chr5:133203791:T:C	rs4533941	T	C	T	SOX2_HMG_3	-1	0	+	0	0	.
chr5	133423631	133423632	chr5:133423632:C:T	rs29545	C	T	T	SOX2_HMG_3	-9	0	+	0	0	.
chr5	133429264	133429265	chr5:133429265:C:T	rs72787310	C	T	C	SOX2_HMG_3	-3	0	+	0	0	.
chr5	133449884	133449885	chr5:133449885:T:C	rs25872	T	C	T	SOX2_HMG_3	10	1	-	8.438888340474584	1.5301335611593627	GATCAATTCTATAGATT
chr5	133738989	133738990	chr5:133738990:A:T	rs55810542	A	T	A	SOX2_HMG_3	-18	0	+	0	0	.
chr5	133817126	133817127	chr5:133817127:G:T	rs59407636	G	T	G	SOX2_HMG_3	29	0	-	0	0	.
chr5	133817149	133817150	chr5:133817150:A:G	rs114109552	A	G	A	SOX2_HMG_3	6	1	-	6.6666492997976965	-0.24210547951752415	TAACAATAGAAGTGAAA
chr5	133952089	133952090	chr5:133952090:A:G	rs13362248	A	G	A	SOX2_HMG_3	9	1	-	1.6131593320933768	0.8064891981563301	GGTCAAGGGTCTTGAGG
chr5	133980017	133980018	chr5:133980018:G:T	rs28517596	G	T	G	SOX2_HMG_3	-9	0	-	0	0	.
chr5	134169183	134169184	chr5:134169184:T:C	rs2284312	T	C	T	SOX2_HMG_3	11	1	+	3.5082372411949554	-3.1844542570373897	AGACAATGCACTTGATG
chr5	134175570	134175571	chr5:134175571:T:C	rs73791516	T	C	T	SOX2_HMG_3	5	1	-	5.962501340795069	-0.9462534385201513	AATCAACTGCATTGTTA
chr5	134284512	134284513	chr5:134284513:T:C	rs326610	T	C	T	SOX2_HMG_3	5	1	-	4.515670734919617	-2.393084044395606	TATCAATGACACTGTGT
chr5	134832134	134832135	chr5:134832135:G:A	rs113436796	G	A	g	SOX2_HMG_3	-7	0	-	0	0	.
chr5	134925139	134925140	chr5:134925140:G:A	rs5013057	G	A	-	SOX2_HMG_3	13	1	+	6.497235160341987	-0.41151961897323364	CGTTAATGTTAGTGAGG
chr5	135067538	135067539	chr5:135067539:T:C	rs7737968	T	C	C	SOX2_HMG_3	4	1	-	8.031512365886222	1.1227575865710027	CTGCAATGTTAGTGATC
chr5	135188046	135188047	chr5:135188047:C:A	rs78893150	C	A	C	SOX2_HMG_3	-2	0	+	0	0	.
chr5	135243610	135243611	chr5:135243611:C:T	rs137996513	C	T	C	SOX2_HMG_3	-13	0	+	0	0	.
chr5	135454898	135454899	chr5:135454899:G:A	rs6866573	G	A	G	SOX2_HMG_3	2	1	+	4.596373768382959	4.596373768382959	TAGCAATGACAATGAAG
chr5	135633271	135633272	chr5:135633272:G:C	rs31263	G	C	G	SOX2_HMG_3	9	1	-	5.184644822025151	-0.44803541513790246	TAGCAATGTCTGTGATG
chr5	135636474	135636475	chr5:135636475:G:A	rs112800818	G	A	G	SOX2_HMG_3	33	0	+	0	0	.
chr5	135693704	135693705	chr5:135693705:T:C	rs4246783	T	C	T	SOX2_HMG_3	30	0	+	0	0	.
chr5	135750392	135750393	chr5:135750393:C:T	rs34960474	C	T	C	SOX2_HMG_3	23	0	-	0	0	.
chr5	135879369	135879370	chr5:135879370:C:T	rs6869653	C	T	C	SOX2_HMG_3	19	0	+	0	0	.
chr5	136135949	136135950	chr5:136135950:C:A	rs11959595	C	A	A	SOX2_HMG_3	-13	0	+	0	0	.
chr5	136135961	136135962	chr5:136135962:G:A	rs11959648	G	A	A	SOX2_HMG_3	-1	0	+	0	0	.
chr5	136353747	136353748	chr5:136353748:C:T	rs2673931	C	T	T	SOX2_HMG_3	-4	0	+	0	0	.
chr5	136605972	136605973	chr5:136605973:G:A	rs35755198	G	A	G	SOX2_HMG_3	0	1	+	5.905678769348071	5.685084490262776	GGTCAGTGCAAGTGATA
chr5	137128121	137128122	chr5:137128122:A:G	rs2905975	A	G	G	SOX2_HMG_3	30	0	+	0	0	.
chr5	137273912	137273913	chr5:137273913:T:C	rs17171273	T	C	T	SOX2_HMG_3	23	0	-	0	0	.
chr5	137288092	137288093	chr5:137288093:T:C	rs2905558	T	C	T	SOX2_HMG_3	19	0	-	0	0	.
chr5	137288106	137288107	chr5:137288107:T:C	rs79147742	T	C	T	SOX2_HMG_3	5	1	-	4.418661133313974	-2.490093646001247	CATCAATGCTCTTGGGA
chr5	137360867	137360868	chr5:137360868:T:C	rs72796529	T	C	T	SOX2_HMG_3	-10	0	-	0	0	.
chr5	137376386	137376387	chr5:137376387:T:C	rs1881619	T	C	T	SOX2_HMG_3	-17	0	+	0	0	.
chr5	137510018	137510019	chr5:137510019:C:T	rs6879168	C	T	C	SOX2_HMG_3	17	0	+	0	0	.
chr5	138101535	138101536	chr5:138101536:A:G	rs4835767	A	G	A	SOX2_HMG_3	15	1	-	10.662559682234594	7.819850526057735	CAGCAATTGCATTGATT
chr5	138955443	138955444	chr5:138955444:G:A	rs564332339	G	A	G	SOX2_HMG_3	8	1	+	3.3295302304232792	2.480486283059651	CAAAAATGGAAGTGATT
chr5	139482477	139482478	chr5:139482478:G:T	rs117579783	G	T	G	SOX2_HMG_3	32	0	-	0	0	.
chr5	139815574	139815575	chr5:139815575:T:C	rs17118443	T	C	C	SOX2_HMG_3	2	1	+	4.4558144185427295	-0.547557651772858	TGTCAAGGTCATTGGTG
chr5	139826095	139826096	chr5:139826096:G:A	rs72794898	G	A	g	SOX2_HMG_3	19	0	+	0	0	.
chr5	140073307	140073308	chr5:140073308:G:A	rs187178000	G	A	G	SOX2_HMG_3	7	1	+	4.642633153990922	1.9138460334295875	GAACAATGAAATAGATT
chr5	140238499	140238500	chr5:140238500:C:T	rs2009997	C	T	c	SOX2_HMG_3	19	0	-	0	0	.
chr5	140604115	140604116	chr5:140604116:T:C	rs778606	T	C	C	SOX2_HMG_3	26	0	+	0	0	.
chr5	141475628	141475629	chr5:141475629:C:T	rs77593456	C	T	C	SOX2_HMG_3	-11	0	+	0	0	.
chr5	141490031	141490032	chr5:141490032:C:T	rs2233602	C	T	C	SOX2_HMG_3	13	1	-	9.546891567550842	2.638136788235621	GATCAGTGGCATTGAGG
chr5	141870936	141870937	chr5:141870937:T:G	rs79970685	T	G	T	SOX2_HMG_3	4	1	-	1.8304765944207748	-5.078278184894444	CCTCAGTGGGATTGATG
chr5	142003018	142003019	chr5:142003019:T:C	rs252114	T	C	T	SOX2_HMG_3	-14	0	-	0	0	.
chr5	142057090	142057091	chr5:142057091:G:C	rs34143804	G	C	G	SOX2_HMG_3	21	0	-	0	0	.
chr5	142063804	142063805	chr5:142063805:G:T	rs146473853	G	T	G	SOX2_HMG_3	34	0	+	0	0	.
chr5	142277679	142277680	chr5:142277680:A:G	rs10059748	A	G	a	SOX2_HMG_3	19	0	-	0	0	.
chr5	142471756	142471757	chr5:142471757:A:T	rs78864562	A	T	A	SOX2_HMG_3	14	1	+	4.048707420343632	1.3359335755293384	ATTCAATGAATTTGAAT
chr5	142512226	142512227	chr5:142512227:C:T	rs249737	C	T	T	SOX2_HMG_3	-3	0	-	0	0	.
chr5	142568256	142568257	chr5:142568257:T:C	rs33984	T	C	C	SOX2_HMG_3	6	1	+	6.523205781740599	-0.3855489975746207	AACCAATTCTAGTGTTA
chr5	142693239	142693240	chr5:142693240:C:T	rs11949820	C	T	c	SOX2_HMG_3	28	0	-	0	0	.
chr5	143121187	143121188	chr5:143121188:G:A	rs41290619	G	A	G	SOX2_HMG_3	27	0	+	0	0	.
chr5	143167595	143167596	chr5:143167596:A:T	rs986564	A	T	A	SOX2_HMG_3	8	1	+	2.715001649589149	3.7015135168174402	CATCAATGATGTAGATT
chr5	143437069	143437070	chr5:143437070:G:C	rs61757416	G	C	G	SOX2_HMG_3	1	1	-	4.054129519358654	5.228525781802679	ACTCACTGACAGTGAGG
chr5	143496911	143496912	chr5:143496912:G:A	rs2028833	G	A	G	SOX2_HMG_3	21	0	+	0	0	.
chr5	143645946	143645947	chr5:143645947:T:A	rs10068655	T	A	A	SOX2_HMG_3	8	1	+	5.427256751160012	4.440744883931721	TCTCAATGTTCTTGACG
chr5	143835367	143835368	chr5:143835368:A:G	rs77979204	A	G	A	SOX2_HMG_3	-3	0	-	0	0	.
chr5	143862503	143862504	chr5:143862504:C:G	rs161553	C	G	C	SOX2_HMG_3	0	1	-	6.925499776594311	6.180432874882987	GGGCAATTCAATTGAGG
chr5	143898579	143898580	chr5:143898580:C:T	rs139259905	C	T	C	SOX2_HMG_3	15	1	-	3.2840456820239243	3.716519263574825	AAGCAAGGAAATTGAGA
chr5	144098962	144098963	chr5:144098963:A:G	rs1497751	A	G	G	SOX2_HMG_3	-19	0	-	0	0	.
chr5	144134454	144134455	chr5:144134455:A:T	rs145918900	A	T	A	SOX2_HMG_3	12	1	-	4.119273446798658	-2.7894813325165617	GAACAATGCTACTGTTT
chr5	144168128	144168129	chr5:144168129:C:T	rs10038078	C	T	C	SOX2_HMG_3	-10	0	-	0	0	.
chr5	144208288	144208289	chr5:144208289:G:A	rs146717397	G	A	G	SOX2_HMG_3	-19	0	+	0	0	.
chr5	144941112	144941113	chr5:144941113:T:G	rs6863541	T	G	G	SOX2_HMG_3	5	1	-	3.701265677572606	-3.2074891017426137	GCTCAATGGAAGAGAAT
chr5	144971737	144971738	chr5:144971738:A:C	rs31901	A	C	C	SOX2_HMG_3	-15	0	+	0	0	.
chr5	145471961	145471962	chr5:145471962:A:G	rs2910272	A	G	A	SOX2_HMG_3	5	1	+	4.912936980260232	-1.9958177990549881	GATCAATTCATTTGAGT
chr5	145636315	145636316	chr5:145636316:G:A	rs73313748	G	A	a	SOX2_HMG_3	20	0	+	0	0	.
chr5	145830634	145830635	chr5:145830635:C:T	rs620323	C	T	C	SOX2_HMG_3	-1	0	-	0	0	.
chr5	146025866	146025867	chr5:146025867:A:G	rs248776	A	G	A	SOX2_HMG_3	36	0	+	0	0	.
chr5	146126536	146126537	chr5:146126537:G:A	rs11540216	G	A	G	SOX2_HMG_3	31	0	+	0	0	.
chr5	146188800	146188801	chr5:146188801:T:A	rs17104298	T	A	T	SOX2_HMG_3	-3	0	+	0	0	.
chr5	146542706	146542707	chr5:146542707:T:C	rs75656298	T	C	T	SOX2_HMG_3	2	1	-	3.472788852718006	3.472788852718006	GGACAATGATATTTATC
chr5	146657473	146657474	chr5:146657474:C:T	rs462664	C	T	C	SOX2_HMG_3	22	0	-	0	0	.
chr5	146699430	146699431	chr5:146699431:C:T	rs141492627	C	T	T	SOX2_HMG_3	11	1	-	8.046685239110262	2.771073710097863	AATAAATGTCAGTGAGG
chr5	147482665	147482666	chr5:147482666:A:C	rs958677	A	C	C	SOX2_HMG_3	23	0	-	0	0	.
chr5	147643279	147643280	chr5:147643280:T:A	rs9918176	T	A	T	SOX2_HMG_3	-15	0	+	0	0	.
chr5	147780867	147780868	chr5:147780868:G:A	rs12655202	G	A	G	SOX2_HMG_3	13	1	+	8.51252878598522	1.603774006669998	TGACAATGATATTGTTA
chr5	147857650	147857651	chr5:147857651:T:C	rs150243556	T	C	T	SOX2_HMG_3	31	0	-	0	0	.
chr5	147963972	147963973	chr5:147963973:C:T	rs7703202	C	T	C	SOX2_HMG_3	25	0	+	0	0	.
chr5	148179294	148179295	chr5:148179295:A:G	rs2159661	A	G	G	SOX2_HMG_3	-2	0	-	0	0	.
chr5	148352220	148352221	chr5:148352221:T:C	rs6870350	T	C	C	SOX2_HMG_3	5	1	-	3.3453661434841115	-3.563388635831107	AAGCAATAGATTTGATG
chr5	148352228	148352229	chr5:148352229:A:G	rs6866106	A	G	A	SOX2_HMG_3	-3	0	-	0	0	.
chr5	148826996	148826997	chr5:148826997:A:C	chr5:148826997:A:C	A	C	A	SOX2_HMG_3	12	1	-	3.215529312081197	-3.6932254672340226	TGGCAATGGCTGTGATG
chr5	148955679	148955680	chr5:148955680:T:C	rs4705298	T	C	T	SOX2_HMG_3	8	1	-	10.792624951489003	11.641668898852632	TATCAATGACAGTGGTG
chr5	149203069	149203070	chr5:149203070:A:C	rs6880899	A	C	C	SOX2_HMG_3	20	0	-	0	0	.
chr5	149232377	149232378	chr5:149232378:G:C	rs1011400	G	C	C	SOX2_HMG_3	-13	0	+	0	0	.
chr5	149320290	149320291	chr5:149320291:A:C	rs540186380	A	C	A	SOX2_HMG_3	-14	0	+	0	0	.
chr5	149404925	149404926	chr5:149404926:C:T	rs376762382	C	T	C	SOX2_HMG_3	29	0	-	0	0	.
chr5	149587338	149587339	chr5:149587339:A:G	rs67190306	A	G	A	SOX2_HMG_3	1	1	+	5.13101467888142	3.2993670888021294	GATCAATGGTAATGCTA
chr5	149611300	149611301	chr5:149611301:A:T	rs376379550	A	T	A	SOX2_HMG_3	10	1	+	3.200785661359141	-3.7079691179560794	GAATAATAGCAGTGATG
chr5	149611306	149611307	chr5:149611307:G:T	rs6873616	G	T	T	SOX2_HMG_3	16	1	+	3.200785661359141	2.397715219582951	GAATAATAGCAGTGATG
chr5	149732631	149732632	chr5:149732632:T:A	rs1076063	T	A	T	SOX2_HMG_3	-15	0	+	0	0	.
chr5	149886311	149886312	chr5:149886312:G:A	rs61733360	G	A	G	SOX2_HMG_3	16	1	+	1.4528867733204225	1.1791991569301512	GGTCAATGTCATGGCAG
chr5	149916615	149916616	chr5:149916616:T:A	rs140562958	T	A	T	SOX2_HMG_3	-8	0	-	0	0	.
chr5	150084309	150084310	chr5:150084310:A:G	rs10043508	A	G	G	SOX2_HMG_3	-13	0	-	0	0	.
chr5	150216488	150216489	chr5:150216489:G:T	rs6891450	G	T	T	SOX2_HMG_3	28	0	+	0	0	.
chr5	150407437	150407438	chr5:150407438:C:T	chr5:150407438:C:T	C	T	C	SOX2_HMG_3	-7	0	+	0	0	.
chr5	150505068	150505069	chr5:150505069:C:T	rs115812670	C	T	c	SOX2_HMG_3	-2	0	+	0	0	.
chr5	150859876	150859877	chr5:150859877:G:T	chr5:150859877:G:T	G	T	g	SOX2_HMG_3	30	0	+	0	0	.
chr5	151004722	151004723	chr5:151004723:C:G	chr5:151004723:C:G	C	G	C	SOX2_HMG_3	-20	0	+	0	0	.
chr5	151005119	151005120	chr5:151005120:A:G	rs76250114	A	G	A	SOX2_HMG_3	16	1	+	2.9577564914783174	3.231444107868589	AAGCAATGGAATAGACA
chr5	151191594	151191595	chr5:151191595:G:A	rs248438	G	A	A	SOX2_HMG_3	-12	0	+	0	0	.
chr5	151225508	151225509	chr5:151225509:A:G	rs153462	A	G	A	SOX2_HMG_3	17	0	-	0	0	.
chr5	151283921	151283922	chr5:151283922:C:T	rs114946340	C	T	C	SOX2_HMG_3	20	0	-	0	0	.
chr5	151313495	151313496	chr5:151313496:G:A	rs78641723	G	A	G	SOX2_HMG_3	-20	0	+	0	0	.
chr5	151452427	151452428	chr5:151452428:A:G	rs918421	A	G	A	SOX2_HMG_3	18	0	+	0	0	.
chr5	151493154	151493155	chr5:151493155:C:A	rs165326	C	A	C	SOX2_HMG_3	31	0	+	0	0	.
chr5	151523598	151523599	chr5:151523599:G:A	rs376564132	G	A	G	SOX2_HMG_3	25	0	+	0	0	.
chr5	151704347	151704348	chr5:151704348:T:C	rs9324708	T	C	C	SOX2_HMG_3	-2	0	-	0	0	.
chr5	152168711	152168712	chr5:152168712:G:C	rs1946486	G	C	G	SOX2_HMG_3	-7	0	+	0	0	.
chr5	152475405	152475406	chr5:152475406:A:G	rs28495602	A	G	G	SOX2_HMG_3	11	1	-	5.360256676208095	-1.3324348220242512	TTTCAGTGCTATTGAAT
chr5	153524002	153524003	chr5:153524003:A:G	rs572798	A	G	A	SOX2_HMG_3	22	0	+	0	0	.
chr5	153560102	153560103	chr5:153560103:C:A	rs72800788	C	A	A	SOX2_HMG_3	33	0	-	0	0	.
chr5	153781438	153781439	chr5:153781439:A:G	rs2964025	A	G	G	SOX2_HMG_3	12	1	-	6.867870084091461	-0.04088469522375915	AAGCAATACAAGTGAAG
chr5	153901246	153901247	chr5:153901247:G:A	rs76624928	G	A	G	SOX2_HMG_3	26	0	-	0	0	.
chr5	154039781	154039782	chr5:154039782:C:T	rs2560062	C	T	T	SOX2_HMG_3	29	0	+	0	0	.
chr5	154218363	154218364	chr5:154218364:G:A	rs4958715	G	A	A	SOX2_HMG_3	13	1	+	12.742252838635679	5.833498059320458	GATCAATAGCAGTGAAG
chr5	154243207	154243208	chr5:154243208:T:G	rs2122895	T	G	G	SOX2_HMG_3	24	0	-	0	0	.
chr5	154243251	154243252	chr5:154243252:C:T	rs2122896	C	T	c	SOX2_HMG_3	-20	0	-	0	0	.
chr5	154258658	154258659	chr5:154258659:A:G	rs520843	A	G	G	SOX2_HMG_3	27	0	-	0	0	.
chr5	154312212	154312213	chr5:154312213:T:C	rs4958726	T	C	T	SOX2_HMG_3	0	1	+	4.260954257366341	4.398283235415005	TATCAAGGGCAGTGTGA
chr5	154332331	154332332	chr5:154332332:G:A	rs6580073	G	A	G	SOX2_HMG_3	22	0	+	0	0	.
chr5	155154859	155154860	chr5:155154860:T:C	rs7716693	T	C	t	SOX2_HMG_3	29	0	+	0	0	.
chr5	155576052	155576053	chr5:155576053:G:A	rs991395	G	A	A	SOX2_HMG_3	-7	0	+	0	0	.
chr5	155665802	155665803	chr5:155665803:A:G	rs17118190	A	G	G	SOX2_HMG_3	15	1	+	6.402792989116259	5.970319407565358	CAACAATGGCAGTGGAA
chr5	155795041	155795042	chr5:155795042:C:A	rs74759452	C	A	A	SOX2_HMG_3	32	0	+	0	0	.
chr5	156125214	156125215	chr5:156125215:G:A	rs60577002	G	A	G	SOX2_HMG_3	-10	0	+	0	0	.
chr5	156328243	156328244	chr5:156328244:G:A	rs74755325	G	A	G	SOX2_HMG_3	9	1	-	4.2322066750358465	5.038876808972893	ATGCAATGACATTGTAC
chr5	156350168	156350169	chr5:156350169:T:A	rs12153015	T	A	T	SOX2_HMG_3	28	0	-	0	0	.
chr5	156434390	156434391	chr5:156434391:A:G	rs62382689	A	G	A	SOX2_HMG_3	5	1	+	4.860799653295702	-2.0479551260195192	ATTCAATGATGGTGAGG
chr5	156590074	156590075	chr5:156590075:A:G	rs3797574	A	G	A	SOX2_HMG_3	-3	0	+	0	0	.
chr5	156590078	156590079	chr5:156590079:A:G	rs157292	A	G	G	SOX2_HMG_3	1	1	+	7.345410244853912	5.513762654774621	TATGAATGGCATTGTTA
chr5	157216388	157216389	chr5:157216389:A:G	rs152113	A	G	A	SOX2_HMG_3	5	1	+	4.414149725064985	-2.4946050542502363	ATTCAATGGTGTTGTGG
chr5	157308909	157308910	chr5:157308910:G:T	rs394975	G	T	T	SOX2_HMG_3	32	0	-	0	0	.
chr5	157308930	157308931	chr5:157308931:C:G	rs442809	C	G	C	SOX2_HMG_3	11	1	-	3.860236458344843	-1.4153750706675543	ACTCAGTTTCAGTGATT
chr5	157550789	157550790	chr5:157550790:C:T	rs12187501	C	T	T	SOX2_HMG_3	9	1	+	3.2434422455512575	4.050112379488303	CAACAAGGGCAGTGAGA
chr5	157675114	157675115	chr5:157675115:C:T	rs142164982	C	T	C	SOX2_HMG_3	20	0	+	0	0	.
chr5	157718397	157718398	chr5:157718398:C:T	rs10053680	C	T	C	SOX2_HMG_3	-3	0	-	0	0	.
chr5	157780493	157780494	chr5:157780494:T:C	rs254680	T	C	T	SOX2_HMG_3	-16	0	+	0	0	.
chr5	157890923	157890924	chr5:157890924:A:G	rs11738052	A	G	A	SOX2_HMG_3	5	1	+	3.5325521700126843	-3.3762026093025352	CACCAATGTAAATGAAG
chr5	158013607	158013608	chr5:158013608:G:T	rs72818116	G	T	T	SOX2_HMG_3	23	0	-	0	0	.
chr5	158080189	158080190	chr5:158080190:G:A	rs1957552	G	A	A	SOX2_HMG_3	-11	0	-	0	0	.
chr5	158087009	158087010	chr5:158087010:G:A	rs13436874	G	A	G	SOX2_HMG_3	22	0	-	0	0	.
chr5	158087035	158087036	chr5:158087036:C:T	rs1650590	C	T	T	SOX2_HMG_3	-4	0	-	0	0	.
chr5	158415730	158415731	chr5:158415731:C:T	rs72804565	C	T	G	SOX2_HMG_3	-11	0	+	0	0	.
chr5	158542505	158542506	chr5:158542506:G:A	rs17624723	G	A	G	SOX2_HMG_3	23	0	-	0	0	.
chr5	158801991	158801992	chr5:158801992:T:A	rs6556365	T	A	A	SOX2_HMG_3	-7	0	-	0	0	.
chr5	159032712	159032713	chr5:159032713:T:C	rs7720283	T	C	C	SOX2_HMG_3	-10	0	-	0	0	.
chr5	159049700	159049701	chr5:159049701:T:C	rs17645325	T	C	T	SOX2_HMG_3	-9	0	-	0	0	.
chr5	159286663	159286664	chr5:159286664:G:A	rs111764671	G	A	G	SOX2_HMG_3	-3	0	+	0	0	.
chr5	159517076	159517077	chr5:159517077:A:G	rs11959014	A	G	A	SOX2_HMG_3	6	1	-	8.355648300383832	1.4468935210686114	TGACAATGTTAGTGTTG
chr5	159798516	159798517	chr5:159798517:C:T	rs79166352	C	T	C	SOX2_HMG_3	33	0	-	0	0	.
chr5	160309021	160309022	chr5:160309022:G:A	rs79101558	G	A	g	SOX2_HMG_3	16	1	+	5.679276732872802	5.40558911648253	GAGCAATGGCATGGAGG
chr5	160309036	160309037	chr5:160309037:A:G	rs12659739	A	G	g	SOX2_HMG_3	31	0	+	0	0	.
chr5	160353537	160353538	chr5:160353538:T:C	rs72814351	T	C	T	SOX2_HMG_3	-20	0	+	0	0	.
chr5	160353572	160353573	chr5:160353573:T:A	rs745432031	T	A	t	SOX2_HMG_3	15	1	+	2.1489946755118288	0.9140922387951067	GGTCAAGGGAATTGGTC
chr5	160353579	160353580	chr5:160353580:T:C	rs942696093	T	C	T	SOX2_HMG_3	22	0	+	0	0	.
chr5	160419864	160419865	chr5:160419865:C:T	rs3811999	C	T	C	SOX2_HMG_3	13	1	-	2.7470566918616823	-4.161698087453537	GGGCTATTTTATTGAGG
chr5	160919830	160919831	chr5:160919831:C:T	rs10515817	C	T	C	SOX2_HMG_3	-17	0	+	0	0	.
chr5	160936810	160936811	chr5:160936811:T:C	rs12653504	T	C	C	SOX2_HMG_3	35	0	-	0	0	.
chr5	160958290	160958291	chr5:160958291:A:G	rs11749743	A	G	A	SOX2_HMG_3	9	1	-	2.426052404071073	1.6193822701340264	CATCAGGGGTATTGAGA
chr5	161307632	161307633	chr5:161307633:G:T	rs194073	G	T	T	SOX2_HMG_3	8	1	+	3.6977576513860786	3.835225571250742	GAGCAATGGTATTTGTA
chr5	162096716	162096717	chr5:162096717:A:G	rs2910223	A	G	A	SOX2_HMG_3	34	0	+	0	0	.
chr5	162128616	162128617	chr5:162128617:C:G	rs78148330	C	G	C	SOX2_HMG_3	-15	0	+	0	0	.
chr5	162313023	162313024	chr5:162313024:A:G	rs150423568	A	G	A	SOX2_HMG_3	-4	0	+	0	0	.
chr5	163041307	163041308	chr5:163041308:C:T	rs9313951	C	T	C	SOX2_HMG_3	35	0	-	0	0	.
chr5	163347812	163347813	chr5:163347813:T:C	rs1037931872	T	C	T	SOX2_HMG_3	-17	0	+	0	0	.
chr5	163379818	163379819	chr5:163379819:G:T	rs10746556	G	T	G	SOX2_HMG_3	24	0	+	0	0	.
chr5	163861943	163861944	chr5:163861944:A:T	rs138742827	A	T	A	SOX2_HMG_3	15	1	+	8.062681241254587	9.29758367797131	AGTCAATATCATTGGAG
chr5	164191735	164191736	chr5:164191736:T:C	rs150212594	T	C	T	SOX2_HMG_3	11	1	+	6.518386468496358	-0.17430502973598982	CATAAATTGTATTGTTG
chr5	164191748	164191749	chr5:164191749:A:G	rs184369710	A	G	A	SOX2_HMG_3	24	0	+	0	0	.
chr5	164247558	164247559	chr5:164247559:C:T	rs374598012	C	T	C	SOX2_HMG_3	6	1	-	3.5604459047919206	3.5604459047919206	CATCCAGGGCATTGATG
chr5	164615273	164615274	chr5:164615274:T:C	rs1366190	T	C	T	SOX2_HMG_3	33	0	-	0	0	.
chr5	165466739	165466740	chr5:165466740:T:C	rs3899980	T	C	C	SOX2_HMG_3	27	0	+	0	0	.
chr5	165881401	165881402	chr5:165881402:A:G	rs26435	A	G	a	SOX2_HMG_3	23	0	-	0	0	.
chr5	165881409	165881410	chr5:165881410:C:T	rs150922313	C	T	C	SOX2_HMG_3	15	1	-	5.804135755894367	6.236609337445268	GTACAATTATAGTGAGA
chr5	166371315	166371316	chr5:166371316:G:A	rs17066756	G	A	G	SOX2_HMG_3	25	0	+	0	0	.
chr5	167030425	167030426	chr5:167030426:C:T	rs2062698	C	T	C	SOX2_HMG_3	-7	0	-	0	0	.
chr5	167684087	167684088	chr5:167684088:A:G	rs12521170	A	G	G	SOX2_HMG_3	32	0	-	0	0	.
chr5	168147616	168147617	chr5:168147617:G:C	rs10077866	G	C	G	SOX2_HMG_3	1	1	+	3.833528081176976	2.6591318187329525	AGGCAATGCCATTGCTT
chr5	168362430	168362431	chr5:168362431:C:G	rs10065566	C	G	C	SOX2_HMG_3	17	0	+	0	0	.
chr5	168598319	168598320	chr5:168598320:C:T	rs158575	C	T	C	SOX2_HMG_3	32	0	-	0	0	.
chr5	168740642	168740643	chr5:168740643:C:G	rs77807301	C	G	C	SOX2_HMG_3	-20	0	-	0	0	.
chr5	168758966	168758967	chr5:168758967:T:C	rs2337554	T	C	C	SOX2_HMG_3	26	0	+	0	0	.
chr5	168988781	168988782	chr5:168988782:C:A	rs113348765	C	A	C	SOX2_HMG_3	26	0	-	0	0	.
chr5	169083446	169083447	chr5:169083447:C:A	rs2668063	C	A	c	SOX2_HMG_3	-14	0	+	0	0	.
chr5	169088447	169088448	chr5:169088448:A:G	rs2221839	A	G	A	SOX2_HMG_3	-4	0	-	0	0	.
chr5	169182685	169182686	chr5:169182686:C:T	rs12653232	C	T	C	SOX2_HMG_3	-13	0	-	0	0	.
chr5	169282062	169282063	chr5:169282063:G:A	rs888781	G	A	G	SOX2_HMG_3	35	0	+	0	0	.
chr5	169701961	169701962	chr5:169701962:T:A	rs2161404	T	A	T	SOX2_HMG_3	-8	0	+	0	0	.
chr5	170176777	170176778	chr5:170176778:A:G	rs10065762	A	G	A	SOX2_HMG_3	20	0	+	0	0	.
chr5	170182236	170182237	chr5:170182237:C:T	rs878187	C	T	C	SOX2_HMG_3	36	0	+	0	0	.
chr5	170386291	170386292	chr5:170386292:T:G	rs314113	T	G	T	SOX2_HMG_3	7	1	+	3.5668259702641554	5.611536474997692	CAGCAATTAGAGTGATG
chr5	170519862	170519863	chr5:170519863:T:A	rs13172157	T	A	T	SOX2_HMG_3	6	1	+	4.549409900368403	-2.359344878946819	TGTCATTTGTATTGTTG
chr5	170569589	170569590	chr5:170569590:T:C	rs12652223	T	C	T	SOX2_HMG_3	36	0	+	0	0	.
chr5	170654250	170654251	chr5:170654251:G:A	rs9313516	G	A	G	SOX2_HMG_3	-10	0	-	0	0	.
chr5	170750238	170750239	chr5:170750239:A:T	rs147768444	A	T	A	SOX2_HMG_3	18	0	+	0	0	.
chr5	171355720	171355721	chr5:171355721:A:G	rs72494521	A	G	A	SOX2_HMG_3	19	0	-	0	0	.
chr5	171689548	171689549	chr5:171689549:T:A	rs62381885	T	A	T	SOX2_HMG_3	14	1	-	4.309630645237567	1.5968568004232733	TATTAATGTTACTGATA
chr5	171710732	171710733	chr5:171710733:G:A	rs1897549	G	A	G	SOX2_HMG_3	7	1	+	2.802231316246839	0.07344419568550409	GGGCAATGGCATGGTTG
chr5	172104254	172104255	chr5:172104255:T:A	rs11955888	T	A	T	SOX2_HMG_3	-5	0	+	0	0	.
chr5	172104255	172104256	chr5:172104256:C:T	rs11952459	C	T	C	SOX2_HMG_3	-4	0	+	0	0	.
chr5	172156742	172156743	chr5:172156743:C:T	chr5:172156743:C:T	C	T	C	SOX2_HMG_3	13	1	-	3.0081257921812554	-3.900628987133965	GGCCAAAGTCATTGAAA
chr5	172316047	172316048	chr5:172316048:C:T	rs73317734	C	T	C	SOX2_HMG_3	-15	0	+	0	0	.
chr5	172316077	172316078	chr5:172316078:T:G	rs79489958	T	G	T	SOX2_HMG_3	15	1	+	2.9744409079843472	1.3070648897167243	GTTCAATGGACTTGGTG
chr5	172329932	172329933	chr5:172329933:A:G	rs17074634	A	G	A	SOX2_HMG_3	-20	0	-	0	0	.
chr5	172420704	172420705	chr5:172420705:T:C	rs111920335	T	C	T	SOX2_HMG_3	25	0	-	0	0	.
chr5	172420706	172420707	chr5:172420707:C:T	rs73804835	C	T	C	SOX2_HMG_3	23	0	-	0	0	.
chr5	172510479	172510480	chr5:172510480:T:C	rs75699607	T	C	T	SOX2_HMG_3	-20	0	+	0	0	.
chr5	172692715	172692716	chr5:172692716:T:C	rs7733395	T	C	T	SOX2_HMG_3	0	1	+	7.503298535123001	7.6406275131716646	TGTAAATGTTATTGAGA
chr5	172727980	172727981	chr5:172727981:T:C	rs80060116	T	C	T	SOX2_HMG_3	7	1	+	3.2781283931644265	-1.4100033135380112	CTTCCATTTTAGTGAGG
chr5	172728003	172728004	chr5:172728004:G:A	rs2662233	G	A	A	SOX2_HMG_3	30	0	+	0	0	.
chr5	172805762	172805763	chr5:172805763:G:A	rs922477	G	A	A	SOX2_HMG_3	19	0	-	0	0	.
chr5	172871037	172871038	chr5:172871038:A:G	rs79718175	A	G	A	SOX2_HMG_3	9	1	-	3.630937647410533	2.8242675134734863	CATTAATACTATTGGTG
chr5	172879018	172879019	chr5:172879019:C:T	rs150433552	C	T	C	SOX2_HMG_3	7	1	-	2.5111629221231295	-0.21762419843820635	AGTCATTGGAAGTGGTG
chr5	173052334	173052335	chr5:173052335:G:T	chr5:173052335:G:T	G	T	G	SOX2_HMG_3	26	0	+	0	0	.
chr5	173248030	173248031	chr5:173248031:A:G	rs62378332	A	G	A	SOX2_HMG_3	-13	0	-	0	0	.
chr5	173452295	173452296	chr5:173452296:C:T	rs559655191	C	T	C	SOX2_HMG_3	-13	0	+	0	0	.
chr5	173452313	173452314	chr5:173452314:A:G	rs28416555	A	G	A	SOX2_HMG_3	5	1	+	5.049068883877894	-1.8596858954373272	TGTCAATGGCACTGAGC
chr5	173452335	173452336	chr5:173452336:C:T	rs149069520	C	T	C	SOX2_HMG_3	27	0	+	0	0	.
chr5	173469126	173469127	chr5:173469127:C:T	rs17075987	C	T	C	SOX2_HMG_3	18	0	+	0	0	.
chr5	173492838	173492839	chr5:173492839:C:A	rs254791	C	A	c	SOX2_HMG_3	-3	0	-	0	0	.
chr5	173522062	173522063	chr5:173522063:G:C	rs4868283	G	C	G	SOX2_HMG_3	17	0	-	0	0	.
chr5	173572523	173572524	chr5:173572524:T:C	rs7703857	T	C	C	SOX2_HMG_3	-9	0	+	0	0	.
chr5	173633567	173633568	chr5:173633568:C:T	rs60845421	C	T	C	SOX2_HMG_3	18	0	-	0	0	.
chr5	173659866	173659867	chr5:173659867:G:A	rs17688826	G	A	G	SOX2_HMG_3	32	0	+	0	0	.
chr5	173824774	173824775	chr5:173824775:A:G	rs77999101	A	G	A	SOX2_HMG_3	-20	0	+	0	0	.
chr5	174166745	174166746	chr5:174166746:T:C	rs7736215	T	C	C	SOX2_HMG_3	-14	0	+	0	0	.
chr5	174178005	174178006	chr5:174178006:A:G	rs62393850	A	G	A	SOX2_HMG_3	23	0	-	0	0	.
chr5	174179947	174179948	chr5:174179948:A:G	rs67027067	A	G	A	SOX2_HMG_3	-14	0	-	0	0	.
chr5	174292950	174292951	chr5:174292951:G:A	rs116693626	G	A	G	SOX2_HMG_3	-20	0	-	0	0	.
chr5	174551440	174551441	chr5:174551441:A:G	rs11739925	A	G	G	SOX2_HMG_3	-6	0	-	0	0	.
chr5	174565611	174565612	chr5:174565612:A:T	rs1490042	A	T	A	SOX2_HMG_3	5	1	+	7.576593324674303	0.6678385453590818	TCTCAATTTCATTGTAT
chr5	174951302	174951303	chr5:174951303:A:T	rs7737192	A	T	a	SOX2_HMG_3	-11	0	-	0	0	.
chr5	174972894	174972895	chr5:174972895:C:T	rs11134893	C	T	c	SOX2_HMG_3	24	0	-	0	0	.
chr5	175352099	175352100	chr5:175352100:G:A	rs860676	G	A	A	SOX2_HMG_3	16	1	-	2.1202317579807275	3.317003811121081	TGTCAATGGCATGGTGC
chr5	175352105	175352106	chr5:175352106:T:A	rs56067739	T	A	T	SOX2_HMG_3	10	1	-	2.1202317579807275	-4.788523021334495	TGTCAATGGCATGGTGC
chr5	175411276	175411277	chr5:175411277:A:G	rs10476155	A	G	A	SOX2_HMG_3	20	0	-	0	0	.
chr5	175480903	175480904	chr5:175480904:C:A	rs2382026	C	A	C	SOX2_HMG_3	17	0	+	0	0	.
chr5	175922993	175922994	chr5:175922994:C:T	rs113166697	C	T	C	SOX2_HMG_3	-10	0	+	0	0	.
chr5	176011237	176011238	chr5:176011238:T:G	rs71270255	T	G	t	SOX2_HMG_3	27	0	+	0	0	.
chr5	176410992	176410993	chr5:176410993:C:G	rs114309703	C	G	.	SOX2_HMG_3	-19	0	-	0	0	.
chr5	176553879	176553880	chr5:176553880:C:A	rs12522196	C	A	C	SOX2_HMG_3	36	0	-	0	0	.
chr5	177137187	177137188	chr5:177137188:G:A	rs1052432	G	A	A	SOX2_HMG_3	-11	0	-	0	0	.
chr5	177440480	177440481	chr5:177440481:G:A	rs549353097	G	A	G	SOX2_HMG_3	-2	0	-	0	0	.
chr5	177889617	177889618	chr5:177889618:A:G	rs142522568	A	G	A	SOX2_HMG_3	-20	0	+	0	0	.
chr5	177889655	177889656	chr5:177889656:T:C	rs867649	T	C	T	SOX2_HMG_3	18	0	+	0	0	.
chr5	178106772	178106773	chr5:178106773:A:G	rs57472053	A	G	.	SOX2_HMG_3	36	0	-	0	0	.
chr5	178177133	178177134	chr5:178177134:T:C	rs7448252	T	C	T	SOX2_HMG_3	4	1	-	4.659752351143522	-2.249002428171699	AAACAATAACAGTGTGG
chr5	178186834	178186835	chr5:178186835:C:T	rs2961664	C	T	C	SOX2_HMG_3	-17	0	+	0	0	.
chr5	178195282	178195283	chr5:178195283:G:C	rs2913814	G	C	G	SOX2_HMG_3	-13	0	-	0	0	.
chr5	178350111	178350112	chr5:178350112:C:G	rs6862908	C	G	G	SOX2_HMG_3	26	0	-	0	0	.
chr5	178370109	178370110	chr5:178370110:G:A	rs2973714	G	A	g	SOX2_HMG_3	-13	0	+	0	0	.
chr5	178467891	178467892	chr5:178467892:C:T	rs1171485519	C	T	C	SOX2_HMG_3	0	1	+	3.0020817909625936	2.8647528129139292	CTTCCATGCTAGTGACA
chr5	178467902	178467903	chr5:178467903:G:C	rs1546222	G	C	G	SOX2_HMG_3	11	1	+	3.0020817909625936	-2.2735297380498043	CTTCCATGCTAGTGACA
chr5	178521075	178521076	chr5:178521076:T:A	rs6600940	T	A	A	SOX2_HMG_3	26	0	-	0	0	.
chr5	178740495	178740496	chr5:178740496:A:T	rs13167549	A	T	a	SOX2_HMG_3	33	0	+	0	0	.
chr5	179187691	179187692	chr5:179187692:G:A	rs252070	G	A	G	SOX2_HMG_3	-17	0	+	0	0	.
chr5	179336722	179336723	chr5:179336723:G:A	rs76653143	G	A	G	SOX2_HMG_3	-8	0	-	0	0	.
chr5	179414874	179414875	chr5:179414875:C:T	rs12652161	C	T	C	SOX2_HMG_3	31	0	-	0	0	.
chr5	179415928	179415929	chr5:179415929:T:C	rs11743636	T	C	T	SOX2_HMG_3	5	1	-	3.7609374716812263	-3.1478173076339946	ATTCAATTCTACTGAGT
chr5	179467244	179467245	chr5:179467245:G:A	rs11952560	G	A	G	SOX2_HMG_3	-19	0	+	0	0	.
chr5	179485253	179485254	chr5:179485254:C:T	rs13178536	C	T	T	SOX2_HMG_3	11	1	-	3.5719387814498527	-1.7036727475625453	GAACAAAGACAGTGAAA
chr5	179739972	179739973	chr5:179739973:A:G	rs10516146	A	G	A	SOX2_HMG_3	5	1	+	4.611509467774982	-2.2972453115402383	GGTCAATATTTTTGTTA
chr5	180034973	180034974	chr5:180034974:G:C	rs62405019	G	C	G	SOX2_HMG_3	1	1	+	14.03471882797231	12.860322565528284	TGTCAATTTTATTGATA
chr5	180117660	180117661	chr5:180117661:A:T	rs114343131	A	T	A	SOX2_HMG_3	2	1	-	5.401078795155801	1.5334639604777582	GATCAATTTTATTTTTC
chr5	180173993	180173994	chr5:180173994:G:A	rs10455080	G	A	G	SOX2_HMG_3	32	0	+	0	0	.
chr5	180181359	180181360	chr5:180181360:T:C	rs11749727	T	C	T	SOX2_HMG_3	-11	0	-	0	0	.
chr5	180196636	180196637	chr5:180196637:G:A	rs7720553	G	A	g	SOX2_HMG_3	18	0	+	0	0	.
chr5	180331607	180331608	chr5:180331608:T:A	rs115152588	T	A	T	SOX2_HMG_3	36	0	+	0	0	.
chr5	180587615	180587616	chr5:180587616:A:G	rs13186854	A	G	A	SOX2_HMG_3	-6	0	-	0	0	.
chr5	181254017	181254018	chr5:181254018:C:T	rs192169869	C	T	C	SOX2_HMG_3	-20	0	-	0	0	.
chr6	229317	229318	chr6:229318:A:G	rs12213088	A	G	A	SOX2_HMG_3	-6	0	+	0	0	.
chr6	250099	250100	chr6:250100:G:A	rs13216889	G	A	G	SOX2_HMG_3	-10	0	-	0	0	.
chr6	375758	375759	chr6:375759:T:C	rs7753579	T	C	.	SOX2_HMG_3	-8	0	+	0	0	.
chr6	408993	408994	chr6:408994:G:A	rs74389255	G	A	G	SOX2_HMG_3	-8	0	-	0	0	.
chr6	681197	681198	chr6:681198:T:C	rs9504741	T	C	C	SOX2_HMG_3	35	0	-	0	0	.
chr6	764878	764879	chr6:764879:G:A	rs74326681	G	A	G	SOX2_HMG_3	-3	0	-	0	0	.
chr6	806537	806538	chr6:806538:C:T	rs2873399	C	T	C	SOX2_HMG_3	17	0	-	0	0	.
chr6	1028325	1028326	chr6:1028326:A:G	rs1737688	A	G	G	SOX2_HMG_3	31	0	-	0	0	.
chr6	1198045	1198046	chr6:1198046:T:C	rs463443	T	C	C	SOX2_HMG_3	35	0	+	0	0	.
chr6	1414449	1414450	chr6:1414450:G:A	rs7742720	G	A	A	SOX2_HMG_3	-1	0	+	0	0	.
chr6	1449975	1449976	chr6:1449976:A:G	rs2816242	A	G	A	SOX2_HMG_3	-9	0	+	0	0	.
chr6	1765571	1765572	chr6:1765572:T:A	rs1076703	T	A	T	SOX2_HMG_3	-7	0	-	0	0	.
chr6	1765572	1765573	chr6:1765573:C:A	rs742535	C	A	C	SOX2_HMG_3	-8	0	-	0	0	.
chr6	2246814	2246815	chr6:2246815:G:A	rs12198593	G	A	G	SOX2_HMG_3	-2	0	-	0	0	.
chr6	2429338	2429339	chr6:2429339:T:C	rs13196905	T	C	C	SOX2_HMG_3	10	1	+	4.14193785832541	4.14193785832541	GAGCAATGCCTTTGAGT
chr6	2626965	2626966	chr6:2626966:A:G	rs9378721	A	G	A	SOX2_HMG_3	14	1	+	3.681217627441356	-0.5006599898597632	AATGAATTCCAGTGACA
chr6	2666933	2666934	chr6:2666934:C:T	rs9501867	C	T	C	SOX2_HMG_3	-19	0	-	0	0	.
chr6	2719314	2719315	chr6:2719315:A:G	rs58421728	A	G	A	SOX2_HMG_3	13	1	+	5.508975596332931	12.417730375648151	GACCAATGGTATTAAAA
chr6	2865876	2865877	chr6:2865877:A:G	rs77653337	A	G	A	SOX2_HMG_3	-13	0	+	0	0	.
chr6	2979145	2979146	chr6:2979146:A:G	rs112680123	A	G	g	SOX2_HMG_3	-18	0	-	0	0	.
chr6	2979976	2979977	chr6:2979977:C:T	rs111792734	C	T	c	SOX2_HMG_3	25	0	-	0	0	.
chr6	2979980	2979981	chr6:2979981:C:G	rs111421945	C	G	g	SOX2_HMG_3	21	0	-	0	0	.
chr6	3061573	3061574	chr6:3061574:G:A	rs73353536	G	A	G	SOX2_HMG_3	-2	0	-	0	0	.
chr6	3084894	3084895	chr6:3084895:G:T	rs7753662	G	T	T	SOX2_HMG_3	21	0	-	0	0	.
chr6	3200236	3200237	chr6:3200237:G:A	rs367761565	G	A	G	SOX2_HMG_3	-2	0	-	0	0	.
chr6	3342413	3342414	chr6:3342414:G:A	rs7772728	G	A	G	SOX2_HMG_3	11	1	+	2.989697276557876	-2.285914252454522	AAACTATGGAAGTGAGG
chr6	3367993	3367994	chr6:3367994:C:T	rs979306	C	T	C	SOX2_HMG_3	32	0	-	0	0	.
chr6	3686184	3686185	chr6:3686185:G:T	rs7749290	G	T	G	SOX2_HMG_3	-13	0	-	0	0	.
chr6	3696816	3696817	chr6:3696817:T:C	rs62392375	T	C	T	SOX2_HMG_3	12	1	+	6.163327117984286	-0.745427661330935	TTTCAGTGCTATTGAAG
chr6	3754754	3754755	chr6:3754755:T:G	rs111722137	T	G	T	SOX2_HMG_3	5	1	-	3.512342615973042	-3.396412163342179	CTTCAACTGTATTGTTG
chr6	3943797	3943798	chr6:3943798:C:T	rs9503833	C	T	c	SOX2_HMG_3	-3	0	-	0	0	.
chr6	4280674	4280675	chr6:4280675:G:A	rs6906088	G	A	A	SOX2_HMG_3	29	0	-	0	0	.
chr6	4319955	4319956	chr6:4319956:G:A	rs2326477	G	A	G	SOX2_HMG_3	22	0	-	0	0	.
chr6	4319973	4319974	chr6:4319974:T:G	rs76432767	T	G	T	SOX2_HMG_3	4	1	-	4.030477592864229	-2.8782771864509913	TGTCAAATCCAGTGATA
chr6	4637959	4637960	chr6:4637960:T:C	rs1625965	T	C	C	SOX2_HMG_3	-9	0	+	0	0	.
chr6	4637988	4637989	chr6:4637989:G:C	rs115820310	G	C	G	SOX2_HMG_3	20	0	+	0	0	.
chr6	5059664	5059665	chr6:5059665:C:A	chr6:5059665:C:A	C	A	c	SOX2_HMG_3	-18	0	-	0	0	.
chr6	5098409	5098410	chr6:5098410:C:T	rs389707	C	T	C	SOX2_HMG_3	33	0	-	0	0	.
chr6	5098419	5098420	chr6:5098420:C:T	rs389691	C	T	C	SOX2_HMG_3	23	0	-	0	0	.
chr6	5102393	5102394	chr6:5102394:T:C	rs461144	T	C	C	SOX2_HMG_3	-17	0	+	0	0	.
chr6	5280025	5280026	chr6:5280026:C:T	rs34817446	C	T	C	SOX2_HMG_3	28	0	+	0	0	.
chr6	5325317	5325318	chr6:5325318:G:C	rs924256972	G	C	G	SOX2_HMG_3	28	0	-	0	0	.
chr6	5454983	5454984	chr6:5454984:A:C	rs115387213	A	C	A	SOX2_HMG_3	11	1	-	8.10665648087663	6.689576511656681	AATCAATGACATTAAAT
chr6	5555354	5555355	chr6:5555355:T:C	rs10484311	T	C	T	SOX2_HMG_3	35	0	-	0	0	.
chr6	5593846	5593847	chr6:5593847:A:G	rs9405853	A	G	G	SOX2_HMG_3	-8	0	+	0	0	.
chr6	5725997	5725998	chr6:5725998:A:C	rs17292578	A	C	A	SOX2_HMG_3	-15	0	-	0	0	.
chr6	5764967	5764968	chr6:5764968:T:G	rs73364259	T	G	T	SOX2_HMG_3	18	0	-	0	0	.
chr6	5853510	5853511	chr6:5853511:C:T	rs75991116	C	T	C	SOX2_HMG_3	8	1	+	9.380953118023328	10.25268947065919	CATCAATGCTAGTGGGT
chr6	5853512	5853513	chr6:5853513:A:G	rs796514270	A	G	A	SOX2_HMG_3	10	1	+	9.380953118023328	2.472198338708107	CATCAATGCTAGTGGGT
chr6	5996398	5996399	chr6:5996399:G:A	rs138601895	G	A	G	SOX2_HMG_3	9	1	-	2.987484010565891	3.794154144502936	AATCAATGTCCTGGAAG
chr6	5996402	5996403	chr6:5996403:T:C	chr6:5996403:T:C	T	C	T	SOX2_HMG_3	5	1	-	2.987484010565891	-3.9212707687493293	AATCAATGTCCTGGAAG
chr6	6244274	6244275	chr6:6244275:A:G	rs1674059	A	G	G	SOX2_HMG_3	-17	0	+	0	0	.
chr6	6260195	6260196	chr6:6260196:A:T	rs2815815	A	T	A	SOX2_HMG_3	-7	0	+	0	0	.
chr6	6384564	6384565	chr6:6384565:A:G	rs9504789	A	G	A	SOX2_HMG_3	22	0	-	0	0	.
chr6	6554817	6554818	chr6:6554818:C:T	rs623810	C	T	C	SOX2_HMG_3	7	1	-	2.9851321616228828	0.25634504106154776	CCACAGTGGTAGTGATG
chr6	6662705	6662706	chr6:6662706:A:G	rs201011	A	G	G	SOX2_HMG_3	12	1	-	7.158579414705978	0.24982463539075694	AAGCAATGATAGTGGAG
chr6	6691908	6691909	chr6:6691909:T:C	rs115560	T	C	C	SOX2_HMG_3	-2	0	+	0	0	.
chr6	6803204	6803205	chr6:6803205:G:T	rs4959410	G	T	G	SOX2_HMG_3	-10	0	+	0	0	.
chr6	7404713	7404714	chr6:7404714:T:C	rs371949382	T	C	T	SOX2_HMG_3	-19	0	+	0	0	.
chr6	7438836	7438837	chr6:7438837:G:A	rs11243180	G	A	A	SOX2_HMG_3	28	0	-	0	0	.
chr6	7660633	7660634	chr6:7660634:A:G	rs80008042	A	G	A	SOX2_HMG_3	-19	0	-	0	0	.
chr6	7770277	7770278	chr6:7770278:T:C	rs140013431	T	C	T	SOX2_HMG_3	-3	0	-	0	0	.
chr6	7959489	7959490	chr6:7959490:C:T	rs17340112	C	T	C	SOX2_HMG_3	22	0	-	0	0	.
chr6	7974451	7974452	chr6:7974452:A:G	rs7769437	A	G	A	SOX2_HMG_3	1	1	+	2.0626543206250503	0.2310067305457595	GATCATTGCCATGGAAA
chr6	7974471	7974472	chr6:7974472:C:T	rs9406071	C	T	C	SOX2_HMG_3	21	0	+	0	0	.
chr6	8071438	8071439	chr6:8071439:A:T	rs9378519	A	T	A	SOX2_HMG_3	5	1	+	3.5628694683752196	-3.345885310940001	AATCAAATCCAGTGAAC
chr6	8284016	8284017	chr6:8284017:C:T	rs660214	C	T	C	SOX2_HMG_3	-7	0	-	0	0	.
chr6	8369819	8369820	chr6:8369820:T:C	rs1934784	T	C	T	SOX2_HMG_3	12	1	+	4.673169445188304	-2.2355853341269167	AATAAATAAAAGTGATA
chr6	8628945	8628946	chr6:8628946:T:A	rs330102	T	A	T	SOX2_HMG_3	24	0	-	0	0	.
chr6	9394497	9394498	chr6:9394498:T:C	rs1206906	T	C	C	SOX2_HMG_3	-16	0	-	0	0	.
chr6	9522498	9522499	chr6:9522499:C:T	rs114334891	C	T	C	SOX2_HMG_3	34	0	-	0	0	.
chr6	9564462	9564463	chr6:9564463:G:A	rs78649119	G	A	G	SOX2_HMG_3	24	0	+	0	0	.
chr6	10367627	10367628	chr6:10367628:T:A	rs9466075	T	A	C	SOX2_HMG_3	1	1	-	6.405133773337635	3.3990899208143204	GATCAATAATGTTGAAT
chr6	10548283	10548284	chr6:10548284:G:T	rs1226003	G	T	T	SOX2_HMG_3	33	0	+	0	0	.
chr6	10555055	10555056	chr6:10555056:T:C	rs3756948	T	C	T	SOX2_HMG_3	1	1	-	9.143607859707188	7.311960269627896	CATGAATGGAATTGATA
chr6	10559717	10559718	chr6:10559718:G:A	rs538918175	G	A	G	SOX2_HMG_3	-17	0	+	0	0	.
chr6	10559718	10559719	chr6:10559719:A:G	rs181455365	A	G	A	SOX2_HMG_3	-16	0	+	0	0	.
chr6	10956356	10956357	chr6:10956357:A:C	rs58835563	A	C	A	SOX2_HMG_3	-10	0	-	0	0	.
chr6	11065688	11065689	chr6:11065689:C:T	rs9468373	C	T	C	SOX2_HMG_3	24	0	-	0	0	.
chr6	11236176	11236177	chr6:11236177:G:A	rs35210001	G	A	G	SOX2_HMG_3	20	0	+	0	0	.
chr6	11333450	11333451	chr6:11333451:T:C	rs4713432	T	C	T	SOX2_HMG_3	30	0	-	0	0	.
chr6	11430880	11430881	chr6:11430881:T:G	rs12664948	T	G	T	SOX2_HMG_3	12	1	+	4.785475545732819	-2.123279233582401	AGTCTATGGTATTGTGT
chr6	11535699	11535700	chr6:11535700:T:C	rs57324707	T	C	T	SOX2_HMG_3	20	0	-	0	0	.
chr6	11618757	11618758	chr6:11618758:T:C	rs111461403	T	C	T	SOX2_HMG_3	15	1	+	9.155930902668567	6.313221746491709	GATCAATATTTTTGATA
chr6	11767602	11767603	chr6:11767603:C:T	rs146574481	C	T	C	SOX2_HMG_3	-14	0	+	0	0	.
chr6	11795756	11795757	chr6:11795757:T:C	rs9296165	T	C	T	SOX2_HMG_3	16	1	-	3.277752252528362	3.5514398689186333	AAGCAAGTTCATTGAGA
chr6	11868309	11868310	chr6:11868310:C:G	rs6918454	C	G	C	SOX2_HMG_3	28	0	+	0	0	.
chr6	12070028	12070029	chr6:12070029:T:A	chr6:12070029:T:A	T	A	T	SOX2_HMG_3	-7	0	-	0	0	.
chr6	12278459	12278460	chr6:12278460:G:A	rs75335602	G	A	G	SOX2_HMG_3	-14	0	-	0	0	.
chr6	12354154	12354155	chr6:12354155:T:C	rs2050288	T	C	T	SOX2_HMG_3	19	0	-	0	0	.
chr6	12512103	12512104	chr6:12512104:A:G	rs9369393	A	G	A	SOX2_HMG_3	-12	0	+	0	0	.
chr6	12512111	12512112	chr6:12512112:A:G	rs9369394	A	G	G	SOX2_HMG_3	-4	0	+	0	0	.
chr6	12539664	12539665	chr6:12539665:C:T	rs9296411	C	T	T	SOX2_HMG_3	-20	0	-	0	0	.
chr6	12679671	12679672	chr6:12679672:A:G	rs12196110	A	G	A	SOX2_HMG_3	8	1	-	7.086874589953452	6.215138237317589	GATCACTTTCAGTGATT
chr6	12753212	12753213	chr6:12753213:T:C	rs150885542	T	C	T	SOX2_HMG_3	-2	0	-	0	0	.
chr6	12947517	12947518	chr6:12947518:A:G	rs142776446	A	G	A	SOX2_HMG_3	-9	0	+	0	0	.
chr6	13260220	13260221	chr6:13260221:C:T	rs396360	C	T	T	SOX2_HMG_3	2	1	+	4.277703709256262	9.281075779571852	CACCAATGTAATGGATA
chr6	13426551	13426552	chr6:13426552:C:A	rs7758003	C	A	A	SOX2_HMG_3	-11	0	-	0	0	.
chr6	13679831	13679832	chr6:13679832:T:C	rs6459020	T	C	C	SOX2_HMG_3	10	1	-	4.053413631273805	-2.8553411480414157	GAGAAATATTATTGAAA
chr6	13681241	13681242	chr6:13681242:G:C	rs151171700	G	C	G	SOX2_HMG_3	5	1	+	2.027726952952718	2.027726952952718	GATCAGTGGTTGTGAGG
chr6	13794874	13794875	chr6:13794875:G:A	rs11961150	G	A	G	SOX2_HMG_3	-10	0	+	0	0	.
chr6	13870647	13870648	chr6:13870648:G:C	rs57916848	G	C	G	SOX2_HMG_3	31	0	+	0	0	.
chr6	14025267	14025268	chr6:14025268:G:A	rs534340448	G	A	G	SOX2_HMG_3	-14	0	+	0	0	.
chr6	14128843	14128844	chr6:14128844:T:G	rs4712226	T	G	T	SOX2_HMG_3	2	1	+	5.711223238500224	1.843608403822184	AATAAATTTTATTGGTG
chr6	14450172	14450173	chr6:14450173:C:T	rs780789464	C	T	C	SOX2_HMG_3	21	0	+	0	0	.
chr6	14807085	14807086	chr6:14807086:A:G	rs556284371	A	G	A	SOX2_HMG_3	4	1	+	3.0460199838315014	-3.86273479548372	GGGCAAGGGAAGTGATG
chr6	14884164	14884165	chr6:14884165:G:C	rs52875	G	C	C	SOX2_HMG_3	19	0	+	0	0	.
chr6	14925907	14925908	chr6:14925908:C:T	rs138535213	C	T	C	SOX2_HMG_3	6	1	+	3.1320171023251575	10.04077188164038	CTTCAACGCTAGTGTTA
chr6	15256836	15256837	chr6:15256837:G:A	rs10949287	G	A	G	SOX2_HMG_3	-9	0	+	0	0	.
chr6	15285077	15285078	chr6:15285078:A:T	rs116599870	A	T	A	SOX2_HMG_3	20	0	+	0	0	.
chr6	15370081	15370082	chr6:15370082:G:A	rs34338229	G	A	G	SOX2_HMG_3	11	1	+	3.5911200054188717	-1.6844915235935274	AATAAATGTCAGTGGGA
chr6	15497362	15497363	chr6:15497363:T:C	rs58121172	T	C	C	SOX2_HMG_3	0	1	+	3.6037084921333156	3.74103747018198	TAAGAATGGTATTGAGC
chr6	15585869	15585870	chr6:15585870:A:T	rs77451123	A	T	A	SOX2_HMG_3	10	1	+	3.2102915556431695	-3.6984632236720505	GAACAAAGGAAGTGAGG
chr6	15688379	15688380	chr6:15688380:G:T	rs6937887	G	T	T	SOX2_HMG_3	8	1	+	3.302027973849282	3.4394958937139455	GGTCAATTGTATTAACC
chr6	15776787	15776788	chr6:15776788:T:C	rs1927573	T	C	t	SOX2_HMG_3	-1	0	-	0	0	.
chr6	15789878	15789879	chr6:15789879:G:T	rs220923	G	T	T	SOX2_HMG_3	21	0	+	0	0	.
chr6	15815962	15815963	chr6:15815963:A:G	rs11751408	A	G	A	SOX2_HMG_3	-18	0	-	0	0	.
chr6	15898653	15898654	chr6:15898654:C:T	rs116460888	C	T	C	SOX2_HMG_3	17	0	-	0	0	.
chr6	16004972	16004973	chr6:16004973:G:A	rs9477012	G	A	G	SOX2_HMG_3	-12	0	-	0	0	.
chr6	16033453	16033454	chr6:16033454:C:T	rs9297000	C	T	C	SOX2_HMG_3	-12	0	-	0	0	.
chr6	16078247	16078248	chr6:16078248:A:G	rs2876407	A	G	G	SOX2_HMG_3	-7	0	-	0	0	.
chr6	16215618	16215619	chr6:16215619:C:T	rs61569822	C	T	C	SOX2_HMG_3	-17	0	-	0	0	.
chr6	16440801	16440802	chr6:16440802:T:C	rs1709172	T	C	C	SOX2_HMG_3	-19	0	-	0	0	.
chr6	16586444	16586445	chr6:16586445:T:C	rs236971	T	C	C	SOX2_HMG_3	29	0	-	0	0	.
chr6	16921544	16921545	chr6:16921545:C:T	rs6904876	C	T	T	SOX2_HMG_3	-2	0	-	0	0	.
chr6	16921545	16921546	chr6:16921546:G:A	rs73725283	G	A	G	SOX2_HMG_3	-3	0	-	0	0	.
chr6	17278218	17278219	chr6:17278219:A:T	rs1745068	A	T	T	SOX2_HMG_3	24	0	-	0	0	.
chr6	17278227	17278228	chr6:17278228:T:C	rs12204209	T	C	T	SOX2_HMG_3	15	1	-	4.6788717957516335	4.246398214200733	GATCAATATTATTTTAT
chr6	17418877	17418878	chr6:17418878:T:C	rs544959207	T	C	T	SOX2_HMG_3	-7	0	-	0	0	.
chr6	17467111	17467112	chr6:17467112:C:T	rs10949427	C	T	C	SOX2_HMG_3	20	0	+	0	0	.
chr6	17579996	17579997	chr6:17579997:G:T	rs6923727	G	T	-	SOX2_HMG_3	20	0	-	0	0	.
chr6	17601595	17601596	chr6:17601596:A:G	rs6940818	A	G	A	SOX2_HMG_3	19	0	-	0	0	.
chr6	17601621	17601622	chr6:17601622:T:C	rs9371004	T	C	T	SOX2_HMG_3	-7	0	-	0	0	.
chr6	17843721	17843722	chr6:17843722:T:C	rs12192810	T	C	C	SOX2_HMG_3	31	0	+	0	0	.
chr6	17859929	17859930	chr6:17859930:C:A	rs76768776	C	A	C	SOX2_HMG_3	17	0	+	0	0	.
chr6	17903188	17903189	chr6:17903189:A:G	rs9477555	A	G	A	SOX2_HMG_3	28	0	+	0	0	.
chr6	18267668	18267669	chr6:18267669:A:T	rs214567	A	T	T	SOX2_HMG_3	32	0	-	0	0	.
chr6	18284484	18284485	chr6:18284485:C:T	rs214544	C	T	C	SOX2_HMG_3	0	1	-	5.227652862750529	5.007058583665234	GAAGAATGGTAGTGAAA
chr6	18350829	18350830	chr6:18350830:G:C	rs115923576	G	C	.	SOX2_HMG_3	36	0	-	0	0	.
chr6	18364501	18364502	chr6:18364502:G:C	rs6928572	G	C	c	SOX2_HMG_3	25	0	-	0	0	.
chr6	18434358	18434359	chr6:18434359:T:C	rs145067404	T	C	T	SOX2_HMG_3	-17	0	+	0	0	.
chr6	18690778	18690779	chr6:18690779:C:T	rs9368017	C	T	C	SOX2_HMG_3	21	0	+	0	0	.
chr6	18784213	18784214	chr6:18784214:C:A	rs7770682	C	A	C	SOX2_HMG_3	34	0	-	0	0	.
chr6	18791559	18791560	chr6:18791560:C:T	rs12205846	C	T	C	SOX2_HMG_3	23	0	+	0	0	.
chr6	19025646	19025647	chr6:19025647:T:C	rs7749839	T	C	T	SOX2_HMG_3	-20	0	+	0	0	.
chr6	19362656	19362657	chr6:19362657:A:C	rs9465360	A	C	A	SOX2_HMG_3	18	0	-	0	0	.
chr6	19394803	19394804	chr6:19394804:T:G	rs16882123	T	G	T	SOX2_HMG_3	-18	0	-	0	0	.
chr6	19805728	19805729	chr6:19805729:C:T	rs73376657	C	T	T	SOX2_HMG_3	-9	0	+	0	0	.
chr6	20119802	20119803	chr6:20119803:C:A	rs80167365	C	A	C	SOX2_HMG_3	-13	0	+	0	0	.
chr6	20119833	20119834	chr6:20119834:C:G	rs59798923	C	G	C	SOX2_HMG_3	18	0	+	0	0	.
chr6	20302864	20302865	chr6:20302865:C:T	rs6933481	C	T	T	SOX2_HMG_3	-20	0	+	0	0	.
chr6	20414588	20414589	chr6:20414589:A:G	rs9460502	A	G	A	SOX2_HMG_3	9	1	-	5.3841738128835415	4.577503678946496	AGTCAATTATAGAGATA
chr6	20630240	20630241	chr6:20630241:G:A	rs9465844	G	A	G	SOX2_HMG_3	8	1	-	5.0641265315002	5.935862884136062	TATCAATGCCAGAGACA
chr6	20665498	20665499	chr6:20665499:T:C	rs58048170	T	C	C	SOX2_HMG_3	10	1	-	2.8254564701431044	-4.083298309172115	CACCAATGCTATTCTTG
chr6	20738177	20738178	chr6:20738178:A:G	rs9368229	A	G	A	SOX2_HMG_3	-7	0	+	0	0	.
chr6	20795216	20795217	chr6:20795217:A:G	rs11751916	A	G	G	SOX2_HMG_3	20	0	-	0	0	.
chr6	20826427	20826428	chr6:20826428:A:G	rs192213622	A	G	A	SOX2_HMG_3	1	1	+	4.096746193190688	2.265098603111397	TATAAATGGAATTGTGT
chr6	20826433	20826434	chr6:20826434:G:T	rs189088108	G	T	G	SOX2_HMG_3	7	1	+	4.096746193190688	2.0520356884571513	TATAAATGGAATTGTGT
chr6	20826442	20826443	chr6:20826443:T:C	rs184805301	T	C	T	SOX2_HMG_3	16	1	+	4.096746193190688	2.8999741400503343	TATAAATGGAATTGTGT
chr6	20827813	20827814	chr6:20827814:T:G	rs190783796	T	G	T	SOX2_HMG_3	-17	0	+	0	0	.
chr6	20990852	20990853	chr6:20990853:G:A	rs12528036	G	A	G	SOX2_HMG_3	-5	0	-	0	0	.
chr6	21778425	21778426	chr6:21778426:C:A	rs11754771	C	A	A	SOX2_HMG_3	-20	0	-	0	0	.
chr6	21893677	21893678	chr6:21893678:G:A	rs9350391	G	A	g	SOX2_HMG_3	-13	0	+	0	0	.
chr6	22057336	22057337	chr6:22057337:C:T	rs55775505	C	T	C	SOX2_HMG_3	-12	0	+	0	0	.
chr6	22067944	22067945	chr6:22067945:G:T	rs4145443	G	T	G	SOX2_HMG_3	13	1	+	3.5065454406684617	-3.4022093386467587	GAGGAATGTAAGTGAAA
chr6	22098977	22098978	chr6:22098978:A:G	rs140546200	A	G	A	SOX2_HMG_3	8	1	-	4.173649993548879	3.301913640913015	TAACAATGTTATTAAAC
chr6	22151517	22151518	chr6:22151518:T:C	rs6923515	T	C	T	SOX2_HMG_3	30	0	-	0	0	.
chr6	22366580	22366581	chr6:22366581:G:A	rs1205917	G	A	A	SOX2_HMG_3	-13	0	+	0	0	.
chr6	22366713	22366714	chr6:22366714:T:C	rs75181074	T	C	T	SOX2_HMG_3	12	1	+	3.6961694603649873	-3.212585318950233	CAGCATTTGTATTGAGG
chr6	22409872	22409873	chr6:22409873:C:T	rs139361548	C	T	C	SOX2_HMG_3	-8	0	+	0	0	.
chr6	22421125	22421126	chr6:22421126:A:T	rs4370356	A	T	A	SOX2_HMG_3	1	1	+	6.463520862511259	3.4574770099879433	GATCACTGGCATTGTAT
chr6	23682114	23682115	chr6:23682115:G:A	rs12212513	G	A	G	SOX2_HMG_3	1	1	+	2.6113331362886156	4.442980726367907	GGTGATTGTCATTGATG
chr6	23955367	23955368	chr6:23955368:C:G	rs489365	C	G	G	SOX2_HMG_3	-1	0	+	0	0	.
chr6	24447151	24447152	chr6:24447152:A:T	rs113984289	A	T	A	SOX2_HMG_3	-4	0	-	0	0	.
chr6	24531190	24531191	chr6:24531191:T:A	rs12199914	T	A	T	SOX2_HMG_3	10	1	-	3.078006032672565	-3.8307487466426546	TAACAAGGCCAGTGAAG
chr6	24546375	24546376	chr6:24546376:C:T	rs2760182	C	T	C	SOX2_HMG_3	-20	0	-	0	0	.
chr6	24614834	24614835	chr6:24614835:G:A	rs7763790	G	A	G	SOX2_HMG_3	33	0	+	0	0	.
chr6	24631908	24631909	chr6:24631909:C:G	rs6923867	C	G	G	SOX2_HMG_3	3	1	+	4.537625751072882	-2.371129028242338	TTTCTATGTCAGTGAAA
chr6	24644029	24644030	chr6:24644030:T:C	rs115563696	T	C	T	SOX2_HMG_3	5	1	-	6.402820507589217	-0.5059342717260042	AAACTATGTTATTGAGG
chr6	24932099	24932100	chr6:24932100:C:T	rs766697923	C	T	c	SOX2_HMG_3	-4	0	-	0	0	.
chr6	24932112	24932113	chr6:24932113:T:G	rs983329460	T	G	t	SOX2_HMG_3	-17	0	-	0	0	.
chr6	24961161	24961162	chr6:24961162:T:C	rs403118	T	C	C	SOX2_HMG_3	-18	0	+	0	0	.
chr6	24961162	24961163	chr6:24961163:G:A	rs1028477	G	A	G	SOX2_HMG_3	-17	0	+	0	0	.
chr6	25007413	25007414	chr6:25007414:G:A	rs549834341	G	A	G	SOX2_HMG_3	-15	0	-	0	0	.
chr6	25302718	25302719	chr6:25302719:T:C	rs9348670	T	C	T	SOX2_HMG_3	15	1	+	6.219356548673552	3.3766473924966944	GATCAATAACAGCGATG
chr6	25302719	25302720	chr6:25302720:G:A	rs139951632	G	A	G	SOX2_HMG_3	16	1	+	6.219356548673552	5.945668932283281	GATCAATAACAGCGATG
chr6	25318817	25318818	chr6:25318818:A:G	rs113875637	A	G	A	SOX2_HMG_3	20	0	-	0	0	.
chr6	25472558	25472559	chr6:25472559:G:A	rs9393646	G	A	G	SOX2_HMG_3	-9	0	-	0	0	.
chr6	25516566	25516567	chr6:25516567:A:G	rs17266491	A	G	A	SOX2_HMG_3	14	1	+	3.4594408278435043	-0.7224367894576149	CAGCAATTTCTTTGAAG
chr6	25764911	25764912	chr6:25764912:A:G	rs2154217	A	G	A	SOX2_HMG_3	5	1	+	3.905706310365329	-3.0030484689498915	ATACAATGTTATTGCAG
chr6	25776720	25776721	chr6:25776721:G:A	rs11754288	G	A	G	SOX2_HMG_3	9	1	-	9.58527200912144	10.391942143058484	TACCAATGGCAGTGAAG
chr6	25992210	25992211	chr6:25992211:A:C	chr6:25992211:A:C	A	C	A	SOX2_HMG_3	20	0	-	0	0	.
chr6	26026724	26026725	chr6:26026725:G:A	rs551140469	G	A	C	SOX2_HMG_3	-20	0	-	0	0	.
chr6	26026985	26026986	chr6:26026986:G:A	rs116366733	G	A	G	SOX2_HMG_3	-8	0	+	0	0	.
chr6	26027008	26027009	chr6:26027009:C:G	rs752050927	C	G	C	SOX2_HMG_3	15	1	+	5.935723942320063	7.1110570802292985	CATCCATGGCAGTGACA
chr6	26045036	26045037	chr6:26045037:C:T	chr6:26045037:C:T	C	T	C	SOX2_HMG_3	11	1	-	5.752448506371109	0.47683697735871045	TATCAATGCTGGTGAAC
chr6	26057552	26057553	chr6:26057553:A:C	rs13201821	A	C	A	SOX2_HMG_3	4	1	+	4.92362540988841	-1.9851293694268095	GAACAATGTATTTGAAA
chr6	26224882	26224883	chr6:26224883:A:G	rs74758545	A	G	A	SOX2_HMG_3	-2	0	+	0	0	.
chr6	26239175	26239176	chr6:26239176:A:G	rs9358913	A	G	A	SOX2_HMG_3	11	1	-	6.242926583425965	-0.44976491480638253	AATAAATGGCATTGTAT
chr6	26255222	26255223	chr6:26255223:A:G	rs6935954	A	G	.	SOX2_HMG_3	34	0	-	0	0	.
chr6	26537059	26537060	chr6:26537060:T:G	rs189437881	T	G	T	SOX2_HMG_3	1	1	-	3.2835567248358406	0.2775128723125253	CAGCAGTGAAAGTGATG
chr6	26555650	26555651	chr6:26555651:A:G	rs10484442	A	G	A	SOX2_HMG_3	5	1	+	7.256960713599511	0.3482059342842911	ATTCAATGCTATTTATT
chr6	26575468	26575469	chr6:26575469:G:A	rs9467798	G	A	A	SOX2_HMG_3	7	1	+	7.908844364806464	5.180057244245129	TATCAATGTAATTAAAA
chr6	26582185	26582186	chr6:26582186:G:A	rs9379892	G	A	A	SOX2_HMG_3	21	0	-	0	0	.
chr6	27547996	27547997	chr6:27547997:G:A	rs6915987	G	A	G	SOX2_HMG_3	-7	0	-	0	0	.
chr6	27583429	27583430	chr6:27583430:T:G	rs73739148	T	G	G	SOX2_HMG_3	-8	0	-	0	0	.
chr6	27751984	27751985	chr6:27751985:T:C	rs9461406	T	C	t	SOX2_HMG_3	21	0	+	0	0	.
chr6	27977617	27977618	chr6:27977618:G:A	rs28360499	G	A	A	SOX2_HMG_3	10	1	+	2.8191809455865506	9.727935724901773	GGTCAATGCCGTTGTCA
chr6	28356025	28356026	chr6:28356026:C:T	rs116088066	C	T	C	SOX2_HMG_3	20	0	-	0	0	.
chr6	28607394	28607395	chr6:28607395:T:A	rs1474986	T	A	T	SOX2_HMG_3	-14	0	-	0	0	.
chr6	28810945	28810946	chr6:28810946:C:T	rs3131341	C	T	C	SOX2_HMG_3	19	0	+	0	0	.
chr6	29514170	29514171	chr6:29514171:G:A	rs1010409	G	A	A	SOX2_HMG_3	8	1	-	5.40021573707188	6.271952089707742	AGCCAATGCCAGTGTTT
chr6	29663966	29663967	chr6:29663967:C:T	rs3130252	C	T	T	SOX2_HMG_3	-15	0	-	0	0	.
chr6	29665961	29665962	chr6:29665962:A:G	rs553004281	A	G	A	SOX2_HMG_3	12	1	-	3.146662172145547	-3.762092607169673	AGGAAATGCTAGTGATT
chr6	29726160	29726161	chr6:29726161:G:A	rs2735061	G	A	G	SOX2_HMG_3	32	0	-	0	0	.
chr6	29726191	29726192	chr6:29726192:C:T	rs1736922	C	T	C	SOX2_HMG_3	1	1	-	3.4323226699296563	5.263970260008947	GGGCACTGTCAGTGATT
chr6	29734428	29734429	chr6:29734429:C:G	rs2844833	C	G	C	SOX2_HMG_3	-12	0	-	0	0	.
chr6	29750577	29750578	chr6:29750578:A:C	rs909729	A	C	a	SOX2_HMG_3	-9	0	+	0	0	.
chr6	29750605	29750606	chr6:29750606:G:A	rs1610733	G	A	a	SOX2_HMG_3	19	0	+	0	0	.
chr6	29756423	29756424	chr6:29756424:C:G	rs1633069	C	G	c	SOX2_HMG_3	16	1	+	4.246237805292052	6.246080300208597	GAACAATTTTATTCATC
chr6	29792107	29792108	chr6:29792108:G:A	rs1611208	G	A	-	SOX2_HMG_3	29	0	-	0	0	.
chr6	29792145	29792146	chr6:29792146:T:C	rs1611209	T	C	-	SOX2_HMG_3	-9	0	-	0	0	.
chr6	29861818	29861819	chr6:29861819:A:G	rs3128906	A	G	-	SOX2_HMG_3	32	0	-	0	0	.
chr6	29954295	29954296	chr6:29954296:A:T	rs5027910	A	T	-	SOX2_HMG_3	-1	0	-	0	0	.
chr6	30056616	30056617	chr6:30056617:C:T	rs9261262	C	T	T	SOX2_HMG_3	25	0	-	0	0	.
chr6	30234651	30234652	chr6:30234652:C:T	rs3132674	C	T	C	SOX2_HMG_3	-10	0	-	0	0	.
chr6	30238408	30238409	chr6:30238409:G:A	rs10456378	G	A	G	SOX2_HMG_3	18	0	-	0	0	.
chr6	30732719	30732720	chr6:30732720:A:G	rs9262155	A	G	A	SOX2_HMG_3	4	1	+	4.537159953544975	-2.3715948257702455	CATCAATACATGTGATG
chr6	30781926	30781927	chr6:30781927:C:T	rs751234149	C	T	C	SOX2_HMG_3	-6	0	-	0	0	.
chr6	30781934	30781935	chr6:30781935:T:G	rs9468830	T	G	G	SOX2_HMG_3	-14	0	-	0	0	.
chr6	30790688	30790689	chr6:30790689:A:G	rs3131043	A	G	G	SOX2_HMG_3	4	1	+	2.98748401056589	-3.9212707687493285	AATCAGAGTCATTGAAG
chr6	30793909	30793910	chr6:30793910:A:G	rs114898531	A	G	A	SOX2_HMG_3	-4	0	-	0	0	.
chr6	30911141	30911142	chr6:30911142:T:C	rs2074512	T	C	C	SOX2_HMG_3	-1	0	-	0	0	.
chr6	31010939	31010940	chr6:31010940:C:T	rs13191258	C	T	C	SOX2_HMG_3	14	1	-	2.2077735357704773	6.389651153071597	GGTCAGTGGAATTGGGA
chr6	31010968	31010969	chr6:31010969:G:A	rs12203410	G	A	G	SOX2_HMG_3	-15	0	-	0	0	.
chr6	31012015	31012016	chr6:31012016:G:A	rs9366764	G	A	G	SOX2_HMG_3	31	0	+	0	0	.
chr6	31012132	31012133	chr6:31012133:T:C	rs9262461	T	C	T	SOX2_HMG_3	22	0	-	0	0	.
chr6	31012155	31012156	chr6:31012156:T:C	rs9380204	T	C	T	SOX2_HMG_3	-1	0	-	0	0	.
chr6	31171353	31171354	chr6:31171354:T:C	rs17197220	T	C	T	SOX2_HMG_3	2	1	+	4.324611502159087	-0.6787605681564992	CCTCAAATTTATTGAAT
chr6	31202736	31202737	chr6:31202737:A:G	rs9263870	A	G	A	SOX2_HMG_3	12	1	-	2.155230893656741	-4.753523885658479	CAGCATTTCCATTGAGG
chr6	31202750	31202751	chr6:31202751:A:G	rs9263871	A	G	G	SOX2_HMG_3	-2	0	-	0	0	.
chr6	31240106	31240107	chr6:31240107:A:G	rs3869120	A	G	A	SOX2_HMG_3	25	0	+	0	0	.
chr6	31266280	31266281	chr6:31266281:A:G	rs9264528	A	G	A	SOX2_HMG_3	-12	0	-	0	0	.
chr6	31293443	31293444	chr6:31293444:G:A	rs75652792	G	A	G	SOX2_HMG_3	31	0	-	0	0	.
chr6	31439342	31439343	chr6:31439343:A:T	rs3749935	A	T	-	SOX2_HMG_3	-1	0	+	0	0	.
chr6	31463111	31463112	chr6:31463112:T:C	rs6928071	T	C	-	SOX2_HMG_3	-3	0	-	0	0	.
chr6	31565828	31565829	chr6:31565829:C:T	rs2857708	C	T	C	SOX2_HMG_3	8	1	-	4.632609281301146	3.7835653339375175	TGGCAGTGGCATTGATG
chr6	31727659	31727660	chr6:31727660:G:A	rs138907940	G	A	G	SOX2_HMG_3	34	0	-	0	0	.
chr6	31781042	31781043	chr6:31781043:G:A	rs707926	G	A	G	SOX2_HMG_3	24	0	-	0	0	.
chr6	32038226	32038227	chr6:32038227:T:C	rs11449852	T	C	T	SOX2_HMG_3	6	1	+	8.605105081779643	1.6963503024644226	GATCAATTTTTTTGAAA
chr6	32079658	32079659	chr6:32079659:C:G	rs204877	C	G	C	SOX2_HMG_3	-9	0	-	0	0	.
chr6	32271649	32271650	chr6:32271650:G:A	rs3115558	G	A	g	SOX2_HMG_3	0	1	+	4.798684524814844	4.578090245729551	GCTAAATGAAATTGAAA
chr6	32337592	32337593	chr6:32337593:T:G	rs926594	T	G	G	SOX2_HMG_3	-2	0	+	0	0	.
chr6	32371570	32371571	chr6:32371571:C:T	rs2076536	C	T	c	SOX2_HMG_3	26	0	+	0	0	.
chr6	32379971	32379972	chr6:32379972:A:G	rs9268446	A	G	a	SOX2_HMG_3	1	1	-	5.539082812085532	5.539082812085532	GTTCAATTTGATTGAAT
chr6	32411323	32411324	chr6:32411324:T:C	rs5007259	T	C	t	SOX2_HMG_3	-2	0	-	0	0	.
chr6	32526813	32526814	chr6:32526814:T:C	rs112158862	T	C	.	SOX2_HMG_3	33	0	-	0	0	.
chr6	32586667	32586668	chr6:32586668:G:A	rs9270094	G	A	.	SOX2_HMG_3	33	0	-	0	0	.
chr6	32634287	32634288	chr6:32634288:T:C	rs72848263	T	C	.	SOX2_HMG_3	-5	0	-	0	0	.
chr6	32639675	32639676	chr6:32639676:C:T	rs9272583	C	T	.	SOX2_HMG_3	29	0	-	0	0	.
chr6	32682455	32682456	chr6:32682456:T:C	rs9275122	T	C	t	SOX2_HMG_3	23	0	-	0	0	.
chr6	32682490	32682491	chr6:32682491:T:C	rs2516006	T	C	T	SOX2_HMG_3	-12	0	-	0	0	.
chr6	32692044	32692045	chr6:32692045:G:T	rs2856673	G	T	G	SOX2_HMG_3	-19	0	-	0	0	.
chr6	32695511	32695512	chr6:32695512:C:A	rs9275292	C	A	A	SOX2_HMG_3	13	1	-	5.048064052650049	-1.8606907266651713	AATCATTTTAATTGTTA
chr6	32725004	32725005	chr6:32725005:C:T	rs9275928	C	T	T	SOX2_HMG_3	7	1	-	5.0525595719053005	2.323772451343965	TATCAATGTCATTTGAG
chr6	32805264	32805265	chr6:32805265:T:G	rs2199871	T	G	g	SOX2_HMG_3	29	0	-	0	0	.
chr6	32887905	32887906	chr6:32887906:C:T	rs6457689	C	T	C	SOX2_HMG_3	35	0	-	0	0	.
chr6	32887939	32887940	chr6:32887940:G:A	rs6457690	G	A	A	SOX2_HMG_3	1	1	-	3.4369143583250557	3.4369143583250557	CCTCATTTTTAGTGAAA
chr6	32957812	32957813	chr6:32957813:T:G	rs35546426	T	G	T	SOX2_HMG_3	32	0	-	0	0	.
chr6	33001918	33001919	chr6:33001919:C:T	rs12193085	C	T	C	SOX2_HMG_3	32	0	+	0	0	.
chr6	33272728	33272729	chr6:33272729:A:G	rs464921	A	G	A	SOX2_HMG_3	-2	0	-	0	0	.
chr6	33384713	33384714	chr6:33384714:A:T	rs1429575612	A	T	a	SOX2_HMG_3	-10	0	+	0	0	.
chr6	33601979	33601980	chr6:33601980:G:A	rs565654	G	A	A	SOX2_HMG_3	3	1	-	6.965525353915158	0.056770574599936396	AATCAATTATTTTGAGA
chr6	33692410	33692411	chr6:33692411:T:C	rs4711338	T	C	C	SOX2_HMG_3	2	1	+	2.697984378820653	-2.3053876914949356	CATCAATGTTAGGGGCA
chr6	33692441	33692442	chr6:33692442:C:T	rs113640642	C	T	C	SOX2_HMG_3	33	0	+	0	0	.
chr6	33793381	33793382	chr6:33793382:A:G	rs7755323	A	G	A	SOX2_HMG_3	-8	0	+	0	0	.
chr6	33858792	33858793	chr6:33858793:G:A	rs4713696	G	A	G	SOX2_HMG_3	-14	0	-	0	0	.
chr6	34011035	34011036	chr6:34011036:A:T	rs73744976	A	T	A	SOX2_HMG_3	-14	0	+	0	0	.
chr6	34055632	34055633	chr6:34055633:G:A	rs565659861	G	A	G	SOX2_HMG_3	20	0	+	0	0	.
chr6	34098704	34098705	chr6:34098705:G:A	rs77652361	G	A	G	SOX2_HMG_3	13	1	+	2.1541644045120947	-4.754590374803126	GATAAAAGCCAGTGATG
chr6	34160312	34160313	chr6:34160313:C:A	rs9368797	C	A	C	SOX2_HMG_3	22	0	-	0	0	.
chr6	34160324	34160325	chr6:34160325:T:C	rs75293058	T	C	T	SOX2_HMG_3	10	1	-	5.567279732190631	-1.341475047124591	ACACAATGTCAGTGGTG
chr6	34282424	34282425	chr6:34282425:T:C	rs12654	T	C	c	SOX2_HMG_3	-5	0	+	0	0	.
chr6	34467354	34467355	chr6:34467355:C:A	rs7773446	C	A	C	SOX2_HMG_3	1	1	-	3.2488812444775546	2.074484982033531	GGGCAATGACAGAGATG
chr6	34588075	34588076	chr6:34588076:G:A	chr6:34588076:G:A	G	A	G	SOX2_HMG_3	-12	0	+	0	0	.
chr6	35394338	35394339	chr6:35394339:A:G	rs139276511	A	G	A	SOX2_HMG_3	6	1	-	2.405007847874995	-4.503746931440226	GATCCATGTCATGGAAT
chr6	35415645	35415646	chr6:35415646:G:A	rs78609397	G	A	G	SOX2_HMG_3	20	0	+	0	0	.
chr6	35611224	35611225	chr6:35611225:A:G	rs3777747	A	G	A	SOX2_HMG_3	12	1	-	7.102482756359127	0.19372797704390554	GATCAATAATAGTGCTG
chr6	35669280	35669281	chr6:35669281:A:G	chr6:35669281:A:G	A	G	A	SOX2_HMG_3	14	1	+	3.5157686056260045	-0.6661090116751145	GAGGAATTCAATTGATG
chr6	35669283	35669284	chr6:35669284:T:G	rs141748559	T	G	T	SOX2_HMG_3	17	0	+	0	0	.
chr6	35684731	35684732	chr6:35684732:G:A	rs187536669	G	A	G	SOX2_HMG_3	-14	0	-	0	0	.
chr6	35811237	35811238	chr6:35811238:C:T	rs116714321	C	T	C	SOX2_HMG_3	-9	0	+	0	0	.
chr6	36119198	36119199	chr6:36119199:A:C	rs11759192	A	C	C	SOX2_HMG_3	28	0	+	0	0	.
chr6	36248394	36248395	chr6:36248395:C:T	rs74913143	C	T	C	SOX2_HMG_3	17	0	+	0	0	.
chr6	36362735	36362736	chr6:36362736:C:T	rs12190328	C	T	c	SOX2_HMG_3	-3	0	+	0	0	.
chr6	36750196	36750197	chr6:36750197:G:A	rs77463948	G	A	G	SOX2_HMG_3	27	0	-	0	0	.
chr6	36751932	36751933	chr6:36751933:G:A	rs78720743	G	A	G	SOX2_HMG_3	34	0	+	0	0	.
chr6	36828029	36828030	chr6:36828030:G:A	rs753581000	G	A	G	SOX2_HMG_3	11	1	+	4.629485850332013	-0.6461256786803856	ATTCAGTGGCAGTGAGA
chr6	36863792	36863793	chr6:36863793:A:G	rs13219913	A	G	G	SOX2_HMG_3	16	1	-	3.3810814964478553	2.1843094433075017	GATCAAGTAAAGTGAGT
chr6	36985490	36985491	chr6:36985491:A:T	rs12213465	A	T	A	SOX2_HMG_3	-15	0	-	0	0	.
chr6	37362262	37362263	chr6:37362263:T:C	rs111294277	T	C	T	SOX2_HMG_3	-17	0	+	0	0	.
chr6	37374143	37374144	chr6:37374144:A:G	rs169005	A	G	A	SOX2_HMG_3	-1	0	-	0	0	.
chr6	37559721	37559722	chr6:37559722:G:T	rs9369007	G	T	T	SOX2_HMG_3	20	0	+	0	0	.
chr6	37657309	37657310	chr6:37657310:G:A	rs6930085	G	A	G	SOX2_HMG_3	3	1	-	2.7030961160349896	-4.205658663280231	TGTCAATGCCTGTGACT
chr6	37823053	37823054	chr6:37823054:G:A	rs78437964	G	A	G	SOX2_HMG_3	-11	0	-	0	0	.
chr6	37915003	37915004	chr6:37915004:G:A	rs259678	G	A	A	SOX2_HMG_3	8	1	+	5.384764218877268	4.535720271513639	TTTCATTGGCATTGAGA
chr6	37941307	37941308	chr6:37941308:G:A	rs2842510	G	A	G	SOX2_HMG_3	20	0	-	0	0	.
chr6	38136076	38136077	chr6:38136077:G:A	rs73421866	G	A	G	SOX2_HMG_3	26	0	-	0	0	.
chr6	39018387	39018388	chr6:39018388:T:C	rs7766930	T	C	C	SOX2_HMG_3	-19	0	-	0	0	.
chr6	39068059	39068060	chr6:39068060:A:C	rs7766275	A	C	A	SOX2_HMG_3	27	0	-	0	0	.
chr6	39274655	39274656	chr6:39274656:A:G	rs2815036	A	G	G	SOX2_HMG_3	-10	0	-	0	0	.
chr6	39424941	39424942	chr6:39424942:T:A	rs4142117	T	A	A	SOX2_HMG_3	36	0	+	0	0	.
chr6	39732810	39732811	chr6:39732811:C:T	rs303650	C	T	T	SOX2_HMG_3	-4	0	-	0	0	.
chr6	39922522	39922523	chr6:39922523:A:C	rs2984659	A	C	A	SOX2_HMG_3	-3	0	+	0	0	.
chr6	40336963	40336964	chr6:40336964:G:A	rs9296331	G	A	G	SOX2_HMG_3	25	0	+	0	0	.
chr6	40386266	40386267	chr6:40386267:A:G	rs6458154	A	G	G	SOX2_HMG_3	3	1	+	3.0266310850735443	3.0266310850735443	TATAAATGTTAGTGCTG
chr6	40555228	40555229	chr6:40555229:C:T	rs13215937	C	T	C	SOX2_HMG_3	-12	0	+	0	0	.
chr6	40555245	40555246	chr6:40555246:A:G	rs6935251	A	G	G	SOX2_HMG_3	5	1	+	3.3073340517963583	-3.6014207275188608	AAGCCATGCCAGTGAGG
chr6	40636476	40636477	chr6:40636477:C:T	rs9367067	C	T	T	SOX2_HMG_3	2	1	-	3.1226000814875454	3.1226000814875454	CCGCAGTGTTAGTGATG
chr6	40678665	40678666	chr6:40678666:A:T	rs17630115	A	T	A	SOX2_HMG_3	1	1	+	8.850834799662769	5.844790947139452	CATCAATGCTAGAGATA
chr6	41209196	41209197	chr6:41209197:A:G	rs4714434	A	G	N	SOX2_HMG_3	16	1	+	7.7265278904872385	8.00021550687751	CATGAATGGAAGTGATA
chr6	41230118	41230119	chr6:41230119:C:T	rs7769759	C	T	-	SOX2_HMG_3	17	0	+	0	0	.
chr6	41256456	41256457	chr6:41256457:A:G	rs2395769	A	G	G	SOX2_HMG_3	21	0	-	0	0	.
chr6	41256488	41256489	chr6:41256489:C:A	rs144935500	C	A	C	SOX2_HMG_3	-11	0	-	0	0	.
chr6	41273202	41273203	chr6:41273203:A:G	rs17644657	A	G	A	SOX2_HMG_3	4	1	+	5.515005161061133	-1.3937496182540856	GGGCAGTGGCATTGATG
chr6	41355945	41355946	chr6:41355946:C:T	rs9381053	C	T	C	SOX2_HMG_3	-6	0	-	0	0	.
chr6	41480885	41480886	chr6:41480886:A:G	rs9394801	A	G	A	SOX2_HMG_3	5	1	+	5.118863793366022	-1.7898909859491983	TTTCAATGTAAATGAAA
chr6	41523486	41523487	chr6:41523487:C:T	rs2477844	C	T	C	SOX2_HMG_3	-2	0	-	0	0	.
chr6	41659009	41659010	chr6:41659010:G:T	rs9357365	G	T	A	SOX2_HMG_3	23	0	-	0	0	.
chr6	41659030	41659031	chr6:41659031:G:C	rs78248170	G	C	G	SOX2_HMG_3	2	1	-	4.168572108100021	5.3043293437375665	GACCATTGTTATTGTTA
chr6	41832890	41832891	chr6:41832891:T:C	rs9381094	T	C	T	SOX2_HMG_3	-15	0	+	0	0	.
chr6	41871699	41871700	chr6:41871700:T:G	rs2251274	T	G	G	SOX2_HMG_3	12	1	+	4.415745445410066	-2.4930093339051536	AAGCAATTTCATTAATT
chr6	41936570	41936571	chr6:41936571:A:G	chr6:41936571:A:G	A	G	A	SOX2_HMG_3	6	1	-	3.286673650869395	-3.6220811284458247	GATCACTGGCACTGAAG
chr6	41936585	41936586	chr6:41936586:C:G	rs11552780	C	G	C	SOX2_HMG_3	-9	0	-	0	0	.
chr6	42047965	42047966	chr6:42047966:G:A	rs77303819	G	A	G	SOX2_HMG_3	-4	0	+	0	0	.
chr6	42167176	42167177	chr6:42167177:G:T	rs57668268	G	T	G	SOX2_HMG_3	-10	0	+	0	0	.
chr6	42276672	42276673	chr6:42276673:T:C	rs34491635	T	C	C	SOX2_HMG_3	-13	0	+	0	0	.
chr6	42447085	42447086	chr6:42447086:C:A	rs72859314	C	A	C	SOX2_HMG_3	34	0	+	0	0	.
chr6	42936535	42936536	chr6:42936536:G:T	rs6458312	G	T	T	SOX2_HMG_3	-15	0	-	0	0	.
chr6	43219326	43219327	chr6:43219327:C:T	rs137991701	C	T	c	SOX2_HMG_3	21	0	+	0	0	.
chr6	43294965	43294966	chr6:43294966:A:T	rs16896398	A	T	A	SOX2_HMG_3	19	0	-	0	0	.
chr6	43481881	43481882	chr6:43481882:G:A	rs984382082	G	A	G	SOX2_HMG_3	22	0	-	0	0	.
chr6	43481889	43481890	chr6:43481890:A:C	chr6:43481890:A:C	A	C	A	SOX2_HMG_3	14	1	-	2.0984005808328616	0.6292968083460362	CTTCAATGGCAGGGTAG
chr6	43490711	43490712	chr6:43490712:A:G	rs9472067	A	G	G	SOX2_HMG_3	-20	0	-	0	0	.
chr6	43766868	43766869	chr6:43766869:C:T	rs9381248	C	T	C	SOX2_HMG_3	4	1	+	2.7664639209136195	2.7664639209136195	CTTCCATTGCAGTGAAG
chr6	43783337	43783338	chr6:43783338:A:G	rs3025033	A	G	A	SOX2_HMG_3	4	1	+	3.165574040148892	-3.7431807391663283	CAGCAATGTTCTTGTGG
chr6	43947835	43947836	chr6:43947836:C:T	rs190768973	C	T	C	SOX2_HMG_3	-1	0	-	0	0	.
chr6	44531644	44531645	chr6:44531645:G:T	rs186961170	G	T	G	SOX2_HMG_3	-20	0	+	0	0	.
chr6	44531669	44531670	chr6:44531670:A:G	rs12209212	A	G	G	SOX2_HMG_3	5	1	+	1.5494229188385584	-5.3593318604766615	GAGCCATGGCAGTGTGG
chr6	44541715	44541716	chr6:44541716:G:A	rs6918083	G	A	G	SOX2_HMG_3	35	0	-	0	0	.
chr6	44542273	44542274	chr6:44542274:A:G	rs1998402	A	G	G	SOX2_HMG_3	14	1	+	2.1061390879169757	-2.0757385293841435	GCTCAAGGGTTTTGATG
chr6	44607558	44607559	chr6:44607559:T:C	rs73737027	T	C	T	SOX2_HMG_3	-3	0	+	0	0	.
chr6	44635764	44635765	chr6:44635765:G:A	rs6922821	G	A	G	SOX2_HMG_3	1	1	-	2.7040329915002	2.7040329915002	TCTCCATGCCAGTGAGT
chr6	45082257	45082258	chr6:45082258:G:T	rs112826330	G	T	G	SOX2_HMG_3	32	0	+	0	0	.
chr6	45132586	45132587	chr6:45132587:G:A	rs1285005	G	A	A	SOX2_HMG_3	13	1	+	7.575627761630294	0.6668729823150734	TTGCAATTTTAGTGATA
chr6	45132592	45132593	chr6:45132593:T:C	rs56283067	T	C	T	SOX2_HMG_3	19	0	+	0	0	.
chr6	45224284	45224285	chr6:45224285:T:A	rs17288250	T	A	T	SOX2_HMG_3	-3	0	+	0	0	.
chr6	45880346	45880347	chr6:45880347:T:C	rs1025414408	T	C	T	SOX2_HMG_3	6	1	+	3.991195536403896	-2.9175592429113246	TTACAATGGTGTTGATA
chr6	45947193	45947194	chr6:45947194:T:C	rs11757345	T	C	C	SOX2_HMG_3	-5	0	-	0	0	.
chr6	46220016	46220017	chr6:46220017:A:T	rs2799355	A	T	T	SOX2_HMG_3	20	0	-	0	0	.
chr6	46323575	46323576	chr6:46323576:A:G	rs569184844	A	G	A	SOX2_HMG_3	25	0	-	0	0	.
chr6	46323602	46323603	chr6:46323603:A:G	rs9472739	A	G	A	SOX2_HMG_3	-2	0	-	0	0	.
chr6	46323613	46323614	chr6:46323614:A:G	rs188788696	A	G	A	SOX2_HMG_3	-13	0	-	0	0	.
chr6	46825437	46825438	chr6:46825438:G:A	rs6920863	G	A	G	SOX2_HMG_3	25	0	-	0	0	.
chr6	46961868	46961869	chr6:46961869:T:C	rs1889578	T	C	C	SOX2_HMG_3	-10	0	-	0	0	.
chr6	46964045	46964046	chr6:46964046:T:C	rs9472935	T	C	C	SOX2_HMG_3	-16	0	-	0	0	.
chr6	47153185	47153186	chr6:47153186:A:G	rs115423236	A	G	A	SOX2_HMG_3	2	1	-	8.84304588981259	3.839673819497	AGTCAATACAATTGTTG
chr6	47153538	47153539	chr6:47153539:A:G	rs926774	A	G	A	SOX2_HMG_3	26	0	-	0	0	.
chr6	47242692	47242693	chr6:47242693:G:A	rs113630792	G	A	G	SOX2_HMG_3	7	1	+	5.67691323152312	2.9481261109617845	CATCAACGGTAGTGGTG
chr6	47519221	47519222	chr6:47519222:A:G	rs1385741	A	G	A	SOX2_HMG_3	2	1	+	4.392273597307233	4.392273597307233	GGAAAATGACATTGATA
chr6	48016309	48016310	chr6:48016310:T:A	rs56131035	T	A	T	SOX2_HMG_3	36	0	-	0	0	.
chr6	48706979	48706980	chr6:48706980:G:A	rs10484857	G	A	G	SOX2_HMG_3	-9	0	-	0	0	.
chr6	48917360	48917361	chr6:48917361:A:G	rs12190836	A	G	A	SOX2_HMG_3	3	1	-	4.222386447282613	11.131141226597835	AATTAATGTCATTAATG
chr6	49326104	49326105	chr6:49326105:G:C	rs7450140	G	C	G	SOX2_HMG_3	-17	0	+	0	0	.
chr6	50188035	50188036	chr6:50188036:C:T	rs1340840	C	T	C	SOX2_HMG_3	17	0	+	0	0	.
chr6	50602675	50602676	chr6:50602676:T:C	rs562247	T	C	T	SOX2_HMG_3	-2	0	-	0	0	.
chr6	50602680	50602681	chr6:50602681:C:A	rs562219	C	A	C	SOX2_HMG_3	-7	0	-	0	0	.
chr6	50816274	50816275	chr6:50816275:C:G	rs2143079	C	G	C	SOX2_HMG_3	-18	0	+	0	0	.
chr6	51262050	51262051	chr6:51262051:G:T	rs2504691	G	T	G	SOX2_HMG_3	-9	0	+	0	0	.
chr6	51541971	51541972	chr6:51541972:G:C	chr6:51541972:G:C	G	C	G	SOX2_HMG_3	3	1	-	10.124089790036448	3.2153350107212293	CAGCAATGCCAGTGAAG
chr6	51675263	51675264	chr6:51675264:T:A	rs2661496	T	A	T	SOX2_HMG_3	10	1	-	3.010451435504183	-3.8983033438110373	GCTCTATAGAAGTGATG
chr6	51743947	51743948	chr6:51743948:C:G	rs9463707	C	G	C	SOX2_HMG_3	31	0	-	0	0	.
chr6	51812284	51812285	chr6:51812285:T:G	rs6929552	T	G	T	SOX2_HMG_3	-5	0	-	0	0	.
chr6	51857598	51857599	chr6:51857599:T:C	rs141894699	T	C	T	SOX2_HMG_3	-15	0	-	0	0	.
chr6	52075313	52075314	chr6:52075314:A:G	chr6:52075314:A:G	A	G	A	SOX2_HMG_3	-12	0	-	0	0	.
chr6	52338070	52338071	chr6:52338071:C:T	rs74542499	C	T	C	SOX2_HMG_3	-11	0	-	0	0	.
chr6	52539011	52539012	chr6:52539012:T:C	rs2268729	T	C	T	SOX2_HMG_3	22	0	-	0	0	.
chr6	52539022	52539023	chr6:52539023:T:C	rs78274921	T	C	T	SOX2_HMG_3	11	1	-	7.109857910601526	12.385469439613923	ATTCAATGTTAATGAAT
chr6	52716355	52716356	chr6:52716356:C:T	rs77908564	C	T	C	SOX2_HMG_3	35	0	-	0	0	.
chr6	53042486	53042487	chr6:53042487:G:A	rs115214880	G	A	G	SOX2_HMG_3	-11	0	+	0	0	.
chr6	53125207	53125208	chr6:53125208:A:G	rs4077047	A	G	A	SOX2_HMG_3	15	1	-	4.765286537504741	1.9225773813278826	AAACTATTATATTGATA
chr6	53527309	53527310	chr6:53527310:A:C	rs761142	A	C	C	SOX2_HMG_3	23	0	-	0	0	.
chr6	53796976	53796977	chr6:53796977:T:C	rs35971619	T	C	T	SOX2_HMG_3	36	0	-	0	0	.
chr6	53809436	53809437	chr6:53809437:G:A	rs9382240	G	A	G	SOX2_HMG_3	32	0	-	0	0	.
chr6	53809485	53809486	chr6:53809486:C:T	rs4475321	C	T	c	SOX2_HMG_3	-17	0	-	0	0	.
chr6	53837040	53837041	chr6:53837041:A:G	rs74411716	A	G	G	SOX2_HMG_3	30	0	-	0	0	.
chr6	53989394	53989395	chr6:53989395:G:A	rs55680514	G	A	G	SOX2_HMG_3	-15	0	+	0	0	.
chr6	54046857	54046858	chr6:54046858:T:C	rs16884643	T	C	t	SOX2_HMG_3	-5	0	-	0	0	.
chr6	54500354	54500355	chr6:54500355:G:T	rs9474883	G	T	g	SOX2_HMG_3	-13	0	-	0	0	.
chr6	55400222	55400223	chr6:55400223:A:G	rs1502199	A	G	G	SOX2_HMG_3	-15	0	+	0	0	.
chr6	55426391	55426392	chr6:55426392:C:T	rs12211679	C	T	C	SOX2_HMG_3	36	0	-	0	0	.
chr6	55605875	55605876	chr6:55605876:C:T	rs7742169	C	T	T	SOX2_HMG_3	-14	0	+	0	0	.
chr6	55678545	55678546	chr6:55678546:T:C	rs9357872	T	C	C	SOX2_HMG_3	5	1	-	7.441360829509582	0.5326060501943612	GCTCAATATCAGTGAGC
chr6	55877978	55877979	chr6:55877979:G:C	rs10485078	G	C	C	SOX2_HMG_3	31	0	+	0	0	.
chr6	56046015	56046016	chr6:56046016:G:C	rs2745750	G	C	C	SOX2_HMG_3	3	1	-	4.203424255539384	-2.7053305237758356	GTTCAATATTAGAGATT
chr6	56055597	56055598	chr6:56055598:A:G	rs1555129	A	G	A	SOX2_HMG_3	-20	0	-	0	0	.
chr6	56076235	56076236	chr6:56076236:C:G	rs12216538	C	G	G	SOX2_HMG_3	-7	0	-	0	0	.
chr6	56076245	56076246	chr6:56076246:T:G	rs12196670	T	G	G	SOX2_HMG_3	-17	0	-	0	0	.
chr6	56200094	56200095	chr6:56200095:A:G	rs76948360	A	G	A	SOX2_HMG_3	22	0	-	0	0	.
chr6	56220450	56220451	chr6:56220451:T:G	rs9382595	T	G	T	SOX2_HMG_3	21	0	+	0	0	.
chr6	56289602	56289603	chr6:56289603:A:T	rs74403309	A	T	A	SOX2_HMG_3	14	1	+	3.2975567573417717	0.5847829125274779	GATAAATGCCCTTGATA
chr6	56329183	56329184	chr6:56329184:A:G	rs9382619	A	G	A	SOX2_HMG_3	3	1	-	4.731115472343633	11.639870251658854	TAATAATGATAGTGATA
chr6	56542308	56542309	chr6:56542309:C:T	rs62412509	C	T	C	SOX2_HMG_3	8	1	+	5.594494898091779	6.466231250727643	CTTCAATGCTATTCAGA
chr6	56842152	56842153	chr6:56842153:A:T	rs36094082	A	T	T	SOX2_HMG_3	15	1	-	5.904946963078379	4.670044526361656	ACTCAATGTCAGTAATT
chr6	56867394	56867395	chr6:56867395:T:C	rs16888192	T	C	C	SOX2_HMG_3	-14	0	-	0	0	.
chr6	61556300	61556301	chr6:61556301:G:T	chr6:61556301:G:T	G	T	G	SOX2_HMG_3	17	0	+	0	0	.
chr6	62480085	62480086	chr6:62480086:G:C	rs62416846	G	C	T	SOX2_HMG_3	-14	0	+	0	0	.
chr6	63000053	63000054	chr6:63000054:T:A	rs7750310	T	A	A	SOX2_HMG_3	27	0	+	0	0	.
chr6	63609265	63609266	chr6:63609266:A:G	rs11757655	A	G	A	SOX2_HMG_3	9	1	-	7.504675259207714	6.698005125270669	GATCAATGATGTTGAGC
chr6	64016440	64016441	chr6:64016441:T:C	rs62415275	T	C	T	SOX2_HMG_3	-12	0	+	0	0	.
chr6	64325020	64325021	chr6:64325021:C:T	rs647367	C	T	T	SOX2_HMG_3	11	1	-	8.82574976989726	3.550138240884861	GGGCAATTTCAGTGATA
chr6	64325045	64325046	chr6:64325046:G:C	rs647342	G	C	G	SOX2_HMG_3	-14	0	-	0	0	.
chr6	64465493	64465494	chr6:64465494:A:G	rs67742898	A	G	A	SOX2_HMG_3	-20	0	+	0	0	.
chr6	64477503	64477504	chr6:64477504:T:G	rs552006411	T	G	T	SOX2_HMG_3	-2	0	+	0	0	.
chr6	64591273	64591274	chr6:64591274:C:T	rs62415825	C	T	T	SOX2_HMG_3	33	0	-	0	0	.
chr6	64591317	64591318	chr6:64591318:T:C	rs62415826	T	C	C	SOX2_HMG_3	-11	0	-	0	0	.
chr6	64591323	64591324	chr6:64591324:G:A	rs62415827	G	A	G	SOX2_HMG_3	-17	0	-	0	0	.
chr6	64830132	64830133	chr6:64830133:C:T	rs62415509	C	T	c	SOX2_HMG_3	32	0	+	0	0	.
chr6	64957397	64957398	chr6:64957398:A:G	rs9360101	A	G	A	SOX2_HMG_3	27	0	+	0	0	.
chr6	65667362	65667363	chr6:65667363:C:A	rs969267	C	A	C	SOX2_HMG_3	-6	0	-	0	0	.
chr6	65837920	65837921	chr6:65837921:C:A	rs115310609	C	A	C	SOX2_HMG_3	-10	0	+	0	0	.
chr6	66081295	66081296	chr6:66081296:G:T	rs3912417	G	T	g	SOX2_HMG_3	13	1	-	6.247965956615162	6.247965956615162	AGTCAATGCTATTCTTA
chr6	66086479	66086480	chr6:66086480:A:C	rs207099	A	C	a	SOX2_HMG_3	20	0	+	0	0	.
chr6	66500101	66500102	chr6:66500102:G:A	rs1913306	G	A	G	SOX2_HMG_3	25	0	-	0	0	.
chr6	66638526	66638527	chr6:66638527:C:T	rs1026389	C	T	T	SOX2_HMG_3	-1	0	+	0	0	.
chr6	67795445	67795446	chr6:67795446:A:T	rs12200076	A	T	A	SOX2_HMG_3	14	1	+	4.836520446944089	2.1237466021297955	CATAAATGGGATTGATG
chr6	68252942	68252943	chr6:68252943:G:T	rs6931224	G	T	G	SOX2_HMG_3	-4	0	-	0	0	.
chr6	68826689	68826690	chr6:68826690:T:C	rs62418566	T	C	T	SOX2_HMG_3	-15	0	+	0	0	.
chr6	68858840	68858841	chr6:68858841:G:T	rs518704	G	T	T	SOX2_HMG_3	3	1	-	5.219954761177881	-1.688800018137338	AAACAATGGTTTTGTTG
chr6	69128399	69128400	chr6:69128400:T:C	rs1482328	T	C	C	SOX2_HMG_3	34	0	+	0	0	.
chr6	69854839	69854840	chr6:69854840:T:C	rs2502572	T	C	C	SOX2_HMG_3	35	0	-	0	0	.
chr6	69854841	69854842	chr6:69854842:T:C	rs2502571	T	C	C	SOX2_HMG_3	33	0	-	0	0	.
chr6	70211685	70211686	chr6:70211686:G:A	rs997953	G	A	A	SOX2_HMG_3	-9	0	+	0	0	.
chr6	71033203	71033204	chr6:71033204:T:C	rs6929275	T	C	t	SOX2_HMG_3	26	0	+	0	0	.
chr6	71339204	71339205	chr6:71339205:T:C	rs828649	T	C	C	SOX2_HMG_3	10	1	-	7.007899167341741	0.09914438802651981	AATCAGTTGCATTGAGA
chr6	71444628	71444629	chr6:71444629:G:A	rs9360453	G	A	G	SOX2_HMG_3	33	0	+	0	0	.
chr6	71733665	71733666	chr6:71733666:G:A	rs1204331	G	A	G	SOX2_HMG_3	13	1	+	3.9726862254160493	-2.936068553899171	AATAAATGGTATTGGCT
chr6	72023646	72023647	chr6:72023647:C:T	rs489348	C	T	T	SOX2_HMG_3	36	0	-	0	0	.
chr6	72033270	72033271	chr6:72033271:A:G	rs12529081	A	G	A	SOX2_HMG_3	-10	0	+	0	0	.
chr6	72081072	72081073	chr6:72081073:C:T	rs55809757	C	T	T	SOX2_HMG_3	20	0	-	0	0	.
chr6	72205308	72205309	chr6:72205309:T:C	rs72937865	T	C	T	SOX2_HMG_3	-8	0	-	0	0	.
chr6	72715425	72715426	chr6:72715426:G:A	rs61075759	G	A	G	SOX2_HMG_3	30	0	-	0	0	.
chr6	72790273	72790274	chr6:72790274:C:G	rs6453605	C	G	G	SOX2_HMG_3	-7	0	-	0	0	.
chr6	72872263	72872264	chr6:72872264:A:G	rs9351949	A	G	G	SOX2_HMG_3	-12	0	+	0	0	.
chr6	73056089	73056090	chr6:73056090:C:G	rs1935541	C	G	C	SOX2_HMG_3	-13	0	+	0	0	.
chr6	73109205	73109206	chr6:73109206:T:A	rs9293920	T	A	T	SOX2_HMG_3	-3	0	+	0	0	.
chr6	73462185	73462186	chr6:73462186:C:A	rs745911886	C	A	C	SOX2_HMG_3	23	0	+	0	0	.
chr6	73523466	73523467	chr6:73523467:T:C	rs185265553	T	C	T	SOX2_HMG_3	-13	0	-	0	0	.
chr6	73523467	73523468	chr6:73523468:A:G	rs57226222	A	G	A	SOX2_HMG_3	-14	0	-	0	0	.
chr6	73615533	73615534	chr6:73615534:T:C	rs628038	T	C	C	SOX2_HMG_3	-7	0	-	0	0	.
chr6	73885543	73885544	chr6:73885544:C:T	rs73466404	C	T	C	SOX2_HMG_3	32	0	-	0	0	.
chr6	74019002	74019003	chr6:74019003:C:T	rs4706565	C	T	c	SOX2_HMG_3	0	1	+	5.113198681020969	4.975869702972305	CATCAAGGAAAGTGAAT
chr6	74212656	74212657	chr6:74212657:C:T	rs2781211	C	T	T	SOX2_HMG_3	16	1	-	5.791124245893876	5.517436629503604	GATGAATAATAGTGAAG
chr6	74459547	74459548	chr6:74459548:T:C	rs9352125	T	C	T	SOX2_HMG_3	19	0	+	0	0	.
chr6	74705661	74705662	chr6:74705662:G:A	rs2502530	G	A	A	SOX2_HMG_3	33	0	+	0	0	.
chr6	74732749	74732750	chr6:74732750:C:T	rs4260730	C	T	C	SOX2_HMG_3	-4	0	+	0	0	.
chr6	75482327	75482328	chr6:75482328:A:G	rs10806039	A	G	A	SOX2_HMG_3	5	1	+	6.79445709323036	-0.11429768608486235	ATTCAATGGTATTCATC
chr6	75933857	75933858	chr6:75933858:A:G	rs34689566	A	G	A	SOX2_HMG_3	11	1	-	5.480672612502838	-1.2120188857295087	TGTGAATATTATTGAAG
chr6	76225982	76225983	chr6:76225983:T:G	rs2314707	T	G	G	SOX2_HMG_3	36	0	-	0	0	.
chr6	76420449	76420450	chr6:76420450:A:G	rs991761	A	G	G	SOX2_HMG_3	4	1	+	5.128201299433901	-1.7805534798813198	GCCCAATGAAAGTGAGG
chr6	76697181	76697182	chr6:76697182:T:A	rs9294019	T	A	T	SOX2_HMG_3	-15	0	-	0	0	.
chr6	76733507	76733508	chr6:76733508:G:A	rs9447764	G	A	G	SOX2_HMG_3	34	0	+	0	0	.
chr6	77559198	77559199	chr6:77559199:T:C	rs1343492	T	C	T	SOX2_HMG_3	5	1	-	5.223526028961508	-1.6852287503537118	TCTCAATGTGATTGTTT
chr6	77634126	77634127	chr6:77634127:A:C	rs16889263	A	C	C	SOX2_HMG_3	16	1	-	3.3658345921748936	4.168905033951083	ATTCAAGGCCAGTGAGT
chr6	77681360	77681361	chr6:77681361:C:T	rs13197085	C	T	C	SOX2_HMG_3	-17	0	+	0	0	.
chr6	78005108	78005109	chr6:78005109:A:G	rs189985186	A	G	A	SOX2_HMG_3	34	0	-	0	0	.
chr6	78154047	78154048	chr6:78154048:T:G	rs73475056	T	G	T	SOX2_HMG_3	0	1	+	6.109410821882434	6.991806701642422	TGGCAATGCAATTGACT
chr6	78156180	78156181	chr6:78156181:G:C	rs9361376	G	C	G	SOX2_HMG_3	33	0	+	0	0	.
chr6	78243528	78243529	chr6:78243529:G:A	rs6911371	G	A	G	SOX2_HMG_3	-7	0	-	0	0	.
chr6	78263483	78263484	chr6:78263484:A:G	rs818249	A	G	G	SOX2_HMG_3	2	1	-	12.985951554042394	7.982579483726806	TGTCAATGTAATTGAAA
chr6	78442471	78442472	chr6:78442472:G:T	rs10455348	G	T	G	SOX2_HMG_3	-19	0	-	0	0	.
chr6	79840298	79840299	chr6:79840299:T:C	rs58131569	T	C	T	SOX2_HMG_3	-14	0	-	0	0	.
chr6	79894710	79894711	chr6:79894711:C:A	rs16891209	C	A	C	SOX2_HMG_3	17	0	-	0	0	.
chr6	79949075	79949076	chr6:79949076:A:C	rs1512120	A	C	A	SOX2_HMG_3	-6	0	+	0	0	.
chr6	79949100	79949101	chr6:79949101:C:A	rs527950344	C	A	C	SOX2_HMG_3	19	0	+	0	0	.
chr6	80129534	80129535	chr6:80129535:G:T	rs2505932	G	T	t	SOX2_HMG_3	23	0	-	0	0	.
chr6	80259384	80259385	chr6:80259385:A:T	rs669420	A	T	T	SOX2_HMG_3	-12	0	+	0	0	.
chr6	80690716	80690717	chr6:80690717:C:G	rs7749684	C	G	C	SOX2_HMG_3	-6	0	-	0	0	.
chr6	80872353	80872354	chr6:80872354:C:T	rs16892314	C	T	C	SOX2_HMG_3	6	1	-	5.82034434489832	5.82034434489832	GAGCAAGGTTATTGAGT
chr6	80872594	80872595	chr6:80872595:G:A	rs62423506	G	A	A	SOX2_HMG_3	36	0	-	0	0	.
chr6	81238197	81238198	chr6:81238198:C:G	rs9361775	C	G	G	SOX2_HMG_3	28	0	+	0	0	.
chr6	81362411	81362412	chr6:81362412:A:C	rs146113353	A	C	A	SOX2_HMG_3	27	0	+	0	0	.
chr6	81459661	81459662	chr6:81459662:C:G	rs73749117	C	G	C	SOX2_HMG_3	-12	0	+	0	0	.
chr6	81561130	81561131	chr6:81561131:C:T	chr6:81561131:C:T	C	T	C	SOX2_HMG_3	-16	0	+	0	0	.
chr6	81561135	81561136	chr6:81561136:T:A	rs7739492	T	A	A	SOX2_HMG_3	-11	0	+	0	0	.
chr6	81617859	81617860	chr6:81617860:A:G	rs1276882	A	G	A	SOX2_HMG_3	9	1	-	4.0786355386396975	3.271965404702652	ACTCAATTATAATGAAT
chr6	81617870	81617871	chr6:81617871:C:T	rs1322895	C	T	c	SOX2_HMG_3	-2	0	-	0	0	.
chr6	81714878	81714879	chr6:81714879:A:G	rs194898	A	G	A	SOX2_HMG_3	5	1	+	10.287083827886086	3.3783290485708637	AATCAATGCAATTGTCA
chr6	81838261	81838262	chr6:81838262:A:G	rs574685827	A	G	A	SOX2_HMG_3	18	0	-	0	0	.
chr6	81845963	81845964	chr6:81845964:C:T	rs6926755	C	T	C	SOX2_HMG_3	-10	0	-	0	0	.
chr6	81969342	81969343	chr6:81969343:A:T	rs10806232	A	T	T	SOX2_HMG_3	11	1	-	4.851777862119823	-1.8409136361125245	ACTCAATGAATTTGAAG
chr6	82046136	82046137	chr6:82046137:G:A	rs1342194	G	A	G	SOX2_HMG_3	32	0	+	0	0	.
chr6	82066308	82066309	chr6:82066309:A:G	rs1984189	A	G	A	SOX2_HMG_3	-19	0	-	0	0	.
chr6	82872398	82872399	chr6:82872399:A:G	rs770640904	A	G	A	SOX2_HMG_3	29	0	+	0	0	.
chr6	82877642	82877643	chr6:82877643:T:C	rs9361982	T	C	T	SOX2_HMG_3	6	1	+	4.4143829684291696	-2.494371810886051	TATGAATGCCATTGTGT
chr6	83265809	83265810	chr6:83265810:C:T	rs34326691	C	T	C	SOX2_HMG_3	-17	0	+	0	0	.
chr6	83279141	83279142	chr6:83279142:T:C	rs1145917	T	C	T	SOX2_HMG_3	12	1	+	5.258175369057653	-1.6505794102575675	AAACAATGACACTGAAG
chr6	83294793	83294794	chr6:83294794:G:A	rs145777697	G	A	G	SOX2_HMG_3	-13	0	+	0	0	.
chr6	83479677	83479678	chr6:83479678:A:T	rs4707000	A	T	A	SOX2_HMG_3	1	1	+	5.376239375365989	2.370195522842674	TATCCATGCCATTGTAA
chr6	84479465	84479466	chr6:84479466:C:T	rs9353189	C	T	C	SOX2_HMG_3	-12	0	-	0	0	.
chr6	84554871	84554872	chr6:84554872:A:C	rs7770073	A	C	C	SOX2_HMG_3	4	1	+	3.7628383332091815	-3.145916446106039	CATGAATAGAAGTGAAA
chr6	84815979	84815980	chr6:84815980:A:G	rs9450046	A	G	G	SOX2_HMG_3	-3	0	-	0	0	.
chr6	84977394	84977395	chr6:84977395:G:A	chr6:84977395:G:A	G	A	G	SOX2_HMG_3	-11	0	+	0	0	.
chr6	84977418	84977419	chr6:84977419:G:C	rs16875388	G	C	G	SOX2_HMG_3	13	1	+	8.588793576692462	1.6800387973772406	ACTCAATGCTATTGTGC
chr6	85097158	85097159	chr6:85097159:G:T	rs116994892	G	T	G	SOX2_HMG_3	18	0	+	0	0	.
chr6	85107041	85107042	chr6:85107042:C:T	rs9444295	C	T	C	SOX2_HMG_3	28	0	+	0	0	.
chr6	85361285	85361286	chr6:85361286:A:T	rs490055	A	T	T	SOX2_HMG_3	-19	0	+	0	0	.
chr6	85592618	85592619	chr6:85592619:T:C	rs6923017	T	C	T	SOX2_HMG_3	10	1	-	4.266986667736916	-2.6417681115783047	GATAAATTCAATTGACA
chr6	85960495	85960496	chr6:85960496:G:A	rs10455455	G	A	g	SOX2_HMG_3	-6	0	-	0	0	.
chr6	86962095	86962096	chr6:86962096:A:G	rs78382687	A	G	A	SOX2_HMG_3	-4	0	-	0	0	.
chr6	87100022	87100023	chr6:87100023:T:A	rs981086	T	A	A	SOX2_HMG_3	30	0	+	0	0	.
chr6	87106666	87106667	chr6:87106667:T:C	rs181927641	T	C	T	SOX2_HMG_3	12	1	-	3.8386672574544134	3.8386672574544134	ATTCAATGCTATAGTAA
chr6	87182241	87182242	chr6:87182242:T:C	rs6904310	T	C	C	SOX2_HMG_3	-17	0	-	0	0	.
chr6	87323124	87323125	chr6:87323125:G:C	rs1753154	G	C	G	SOX2_HMG_3	-13	0	+	0	0	.
chr6	87323133	87323134	chr6:87323134:C:G	rs60226642	C	G	C	SOX2_HMG_3	-4	0	+	0	0	.
chr6	87338472	87338473	chr6:87338473:A:G	rs242279	A	G	A	SOX2_HMG_3	14	1	+	4.949471460289281	0.7675938429881624	CAGAAATGACATTGATT
chr6	87589591	87589592	chr6:87589592:A:C	rs9450751	A	C	A	SOX2_HMG_3	20	0	+	0	0	.
chr6	87697591	87697592	chr6:87697592:A:G	rs140521980	A	G	A	SOX2_HMG_3	24	0	+	0	0	.
chr6	87917689	87917690	chr6:87917690:G:A	rs9444564	G	A	G	SOX2_HMG_3	33	0	+	0	0	.
chr6	87974112	87974113	chr6:87974113:T:A	rs2180716	T	A	A	SOX2_HMG_3	8	1	+	10.178436301192127	9.191924433963838	CATCAAAGTTATTGAAG
chr6	88178830	88178831	chr6:88178831:A:C	rs61444148	A	C	A	SOX2_HMG_3	-17	0	+	0	0	.
chr6	88179496	88179497	chr6:88179497:C:G	rs4707437	C	G	G	SOX2_HMG_3	-10	0	-	0	0	.
chr6	88963989	88963990	chr6:88963990:G:A	rs117955055	G	A	G	SOX2_HMG_3	33	0	+	0	0	.
chr6	89080489	89080490	chr6:89080490:G:A	rs2231266	G	A	G	SOX2_HMG_3	29	0	-	0	0	.
chr6	89082192	89082193	chr6:89082193:A:T	rs959635893	A	T	A	SOX2_HMG_3	9	1	+	6.630616339999389	8.489191681946117	TAGCAATTGAATTGACT
chr6	89082211	89082212	chr6:89082212:A:G	rs376349604	A	G	A	SOX2_HMG_3	28	0	+	0	0	.
chr6	89203388	89203389	chr6:89203389:C:G	rs4590241	C	G	G	SOX2_HMG_3	-5	0	-	0	0	.
chr6	89203392	89203393	chr6:89203393:G:A	rs4457139	G	A	A	SOX2_HMG_3	-9	0	-	0	0	.
chr6	89917567	89917568	chr6:89917568:A:G	rs56331762	A	G	A	SOX2_HMG_3	36	0	+	0	0	.
chr6	89975927	89975928	chr6:89975928:G:A	rs16882324	G	A	G	SOX2_HMG_3	0	1	+	10.460648134623431	10.240053855538138	GGTCAATTCAATTGATC
chr6	90079060	90079061	chr6:90079061:T:C	rs115781566	T	C	T	SOX2_HMG_3	2	1	+	2.9719128860347235	-2.031459184280865	CATCAATGGGATTGCGA
chr6	90413801	90413802	chr6:90413802:G:T	rs144716657	G	T	G	SOX2_HMG_3	-2	0	+	0	0	.
chr6	90432675	90432676	chr6:90432676:A:T	rs12194712	A	T	A	SOX2_HMG_3	2	1	-	14.361030664274896	10.493415829596854	AGTCAATGATATTGAGG
chr6	91172263	91172264	chr6:91172264:G:C	rs4544882	G	C	C	SOX2_HMG_3	-16	0	+	0	0	.
chr6	91852803	91852804	chr6:91852804:C:T	rs2454267	C	T	T	SOX2_HMG_3	-7	0	+	0	0	.
chr6	91886625	91886626	chr6:91886626:C:T	rs4707704	C	T	C	SOX2_HMG_3	33	0	-	0	0	.
chr6	91941571	91941572	chr6:91941572:C:A	rs117859906	C	A	C	SOX2_HMG_3	30	0	+	0	0	.
chr6	92181593	92181594	chr6:92181594:A:G	rs950360	A	G	A	SOX2_HMG_3	28	0	-	0	0	.
chr6	92565643	92565644	chr6:92565644:C:T	rs118134495	C	T	C	SOX2_HMG_3	-13	0	+	0	0	.
chr6	92838641	92838642	chr6:92838642:A:G	rs6936761	A	G	G	SOX2_HMG_3	18	0	+	0	0	.
chr6	93166106	93166107	chr6:93166107:A:G	rs12193966	A	G	A	SOX2_HMG_3	15	1	-	4.59323583430319	1.7505266781263324	TAGCAATTATAATGATG
chr6	94377165	94377166	chr6:94377166:C:T	rs441388	C	T	C	SOX2_HMG_3	8	1	+	6.257365630100993	7.129101982736856	TGTCAAGGCCATTGAAA
chr6	94698949	94698950	chr6:94698950:G:A	rs1446104512	G	A	G	SOX2_HMG_3	36	0	+	0	0	.
chr6	94862652	94862653	chr6:94862653:C:G	chr6:94862653:C:G	C	G	C	SOX2_HMG_3	30	0	+	0	0	.
chr6	94862656	94862657	chr6:94862657:A:T	chr6:94862657:A:T	A	T	A	SOX2_HMG_3	34	0	+	0	0	.
chr6	95885721	95885722	chr6:95885722:C:T	rs2485195	C	T	C	SOX2_HMG_3	31	0	-	0	0	.
chr6	96625219	96625220	chr6:96625220:C:T	rs1413525	C	T	C	SOX2_HMG_3	11	1	-	4.420982728813482	-0.854628800198916	GAACCATGGCAGTGAAA
chr6	96968396	96968397	chr6:96968397:A:C	rs35745860	A	C	a	SOX2_HMG_3	-20	0	+	0	0	.
chr6	97689125	97689126	chr6:97689126:A:T	rs72925034	A	T	A	SOX2_HMG_3	-19	0	+	0	0	.
chr6	99606368	99606369	chr6:99606369:T:A	rs330839	T	A	A	SOX2_HMG_3	9	1	+	4.419731419255668	2.5611560773089375	AATCAATAGTAGTTAAC
chr6	100087926	100087927	chr6:100087927:T:A	rs2474261	T	A	a	SOX2_HMG_3	-19	0	-	0	0	.
chr6	100241488	100241489	chr6:100241489:G:T	rs61068331	G	T	G	SOX2_HMG_3	-8	0	-	0	0	.
chr6	100416952	100416953	chr6:100416953:T:C	rs3798499	T	C	T	SOX2_HMG_3	-9	0	-	0	0	.
chr6	100593760	100593761	chr6:100593761:G:C	rs116979546	G	C	G	SOX2_HMG_3	-16	0	-	0	0	.
chr6	100720562	100720563	chr6:100720563:G:A	rs12194255	G	A	A	SOX2_HMG_3	21	0	+	0	0	.
chr6	101351919	101351920	chr6:101351920:A:G	rs567169305	A	G	A	SOX2_HMG_3	-5	0	+	0	0	.
chr6	101798752	101798753	chr6:101798753:T:C	rs4839801	T	C	C	SOX2_HMG_3	24	0	+	0	0	.
chr6	101957806	101957807	chr6:101957807:T:C	rs1304634	T	C	T	SOX2_HMG_3	-1	0	+	0	0	.
chr6	102327803	102327804	chr6:102327804:T:C	rs9377354	T	C	c	SOX2_HMG_3	-13	0	-	0	0	.
chr6	102641594	102641595	chr6:102641595:C:A	rs11970397	C	A	C	SOX2_HMG_3	-14	0	+	0	0	.
chr6	102918837	102918838	chr6:102918838:T:G	rs79045641	T	G	T	SOX2_HMG_3	36	0	+	0	0	.
chr6	103623073	103623074	chr6:103623074:T:C	rs9499612	T	C	T	SOX2_HMG_3	-7	0	+	0	0	.
chr6	103649243	103649244	chr6:103649244:T:C	rs9654623	T	C	T	SOX2_HMG_3	5	1	-	4.94626714478761	-1.9624876345276092	AAACAATGGTATTTTTA
chr6	103724054	103724055	chr6:103724055:A:G	rs9377570	A	G	G	SOX2_HMG_3	16	1	-	4.235949767032567	3.0391777138922134	TTTCCATGGAATTGAAT
chr6	104809108	104809109	chr6:104809109:T:C	rs73768821	T	C	T	SOX2_HMG_3	32	0	+	0	0	.
chr6	105113608	105113609	chr6:105113609:T:A	rs1981480	T	A	T	SOX2_HMG_3	-5	0	-	0	0	.
chr6	105210474	105210475	chr6:105210475:C:T	rs67107125	C	T	C	SOX2_HMG_3	8	1	-	4.1459752046654685	3.29693125730184	TGCCAATGGCAGTGACC
chr6	105210495	105210496	chr6:105210496:A:C	rs67836055	A	C	A	SOX2_HMG_3	-13	0	-	0	0	.
chr6	105436725	105436726	chr6:105436726:A:G	rs10440860	A	G	A	SOX2_HMG_3	12	1	-	5.419211957389726	-1.489542821925494	GAAAAATGCTATTGATC
chr6	105665268	105665269	chr6:105665269:G:A	rs13215959	G	A	G	SOX2_HMG_3	35	0	+	0	0	.
chr6	105676976	105676977	chr6:105676977:C:G	rs73506303	C	G	C	SOX2_HMG_3	22	0	-	0	0	.
chr6	105678600	105678601	chr6:105678601:C:T	rs59363460	C	T	C	SOX2_HMG_3	-3	0	+	0	0	.
chr6	105760089	105760090	chr6:105760090:T:C	rs72931525	T	C	T	SOX2_HMG_3	4	1	-	5.006611532327323	-1.9021432469878974	CAACAATGCTCTTGAGG
chr6	105804540	105804541	chr6:105804541:G:A	rs1876556	G	A	A	SOX2_HMG_3	18	0	+	0	0	.
chr6	105810237	105810238	chr6:105810238:C:T	rs6901016	C	T	C	SOX2_HMG_3	24	0	+	0	0	.
chr6	105836248	105836249	chr6:105836249:T:G	rs11752904	T	G	T	SOX2_HMG_3	-16	0	+	0	0	.
chr6	105886555	105886556	chr6:105886556:A:T	rs6903938	A	T	A	SOX2_HMG_3	35	0	-	0	0	.
chr6	105886606	105886607	chr6:105886607:T:C	rs6926928	T	C	T	SOX2_HMG_3	-16	0	-	0	0	.
chr6	105893824	105893825	chr6:105893825:A:C	rs73772350	A	C	A	SOX2_HMG_3	36	0	+	0	0	.
chr6	105901921	105901922	chr6:105901922:A:T	rs76368398	A	T	A	SOX2_HMG_3	26	0	+	0	0	.
chr6	105959510	105959511	chr6:105959511:C:T	rs9386496	C	T	T	SOX2_HMG_3	22	0	-	0	0	.
chr6	106116360	106116361	chr6:106116361:A:G	rs533733	A	G	G	SOX2_HMG_3	-13	0	-	0	0	.
chr6	106148809	106148810	chr6:106148810:G:A	rs9399974	G	A	A	SOX2_HMG_3	34	0	-	0	0	.
chr6	106252272	106252273	chr6:106252273:A:G	rs12524358	A	G	A	SOX2_HMG_3	33	0	+	0	0	.
chr6	106474740	106474741	chr6:106474741:C:T	rs111554783	C	T	C	SOX2_HMG_3	-7	0	+	0	0	.
chr6	106739650	106739651	chr6:106739651:C:T	rs139738683	C	T	C	SOX2_HMG_3	3	1	+	2.953352894557441	-3.95540188475778	AGTCAATGCCAATGGAA
chr6	107152932	107152933	chr6:107152933:C:G	rs1045159	C	G	G	SOX2_HMG_3	36	0	+	0	0	.
chr6	107540725	107540726	chr6:107540726:G:A	rs79596750	G	A	G	SOX2_HMG_3	20	0	+	0	0	.
chr6	107641265	107641266	chr6:107641266:C:T	rs72945685	C	T	C	SOX2_HMG_3	15	1	-	4.747085485389171	5.179559066940072	AGGCAATCTTATTGAGG
chr6	107689370	107689371	chr6:107689371:T:C	rs9372165	T	C	C	SOX2_HMG_3	34	0	-	0	0	.
chr6	107807620	107807621	chr6:107807621:A:G	rs74943503	A	G	A	SOX2_HMG_3	4	1	+	5.481935234592626	-1.426819544722593	TTACAATGTTATTGTCA
chr6	107841138	107841139	chr6:107841139:A:G	rs17596103	A	G	A	SOX2_HMG_3	23	0	+	0	0	.
chr6	107992011	107992012	chr6:107992012:C:G	rs73518833	C	G	C	SOX2_HMG_3	13	1	-	3.4131528162892235	-3.495601963025996	GAGCTATGACAGTGAGG
chr6	108364511	108364512	chr6:108364512:A:G	rs9398169	A	G	A	SOX2_HMG_3	6	1	-	2.9343906732609124	-3.9743641060543062	GATTAATGTCTTTGAAA
chr6	108729174	108729175	chr6:108729175:G:T	rs9486940	G	T	g	SOX2_HMG_3	3	1	-	6.536658572546282	-0.3720962067689386	TAACAATGCTATTAATG
chr6	108896932	108896933	chr6:108896933:A:G	rs2806370	A	G	G	SOX2_HMG_3	8	1	-	6.4917643955865145	5.6200280429506515	TATCAAGGTAAGTGAAA
chr6	108985759	108985760	chr6:108985760:C:A	rs2145763	C	A	C	SOX2_HMG_3	24	0	-	0	0	.
chr6	109059904	109059905	chr6:109059905:A:G	rs565800876	A	G	A	SOX2_HMG_3	-1	0	+	0	0	.
chr6	109059936	109059937	chr6:109059937:A:G	rs79723641	A	G	G	SOX2_HMG_3	31	0	+	0	0	.
chr6	109867921	109867922	chr6:109867922:T:C	rs9487240	T	C	T	SOX2_HMG_3	36	0	-	0	0	.
chr6	109867923	109867924	chr6:109867924:T:G	rs62437601	T	G	T	SOX2_HMG_3	34	0	-	0	0	.
chr6	109867945	109867946	chr6:109867946:A:G	rs9487241	A	G	G	SOX2_HMG_3	12	1	-	3.9902068799650965	-2.918547899350124	AAGCACTGAAATTGAAG
chr6	110021556	110021557	chr6:110021557:A:G	rs7763290	A	G	G	SOX2_HMG_3	2	1	-	10.058106117444447	5.05473404712886	TATCAATTCCAGTGTTA
chr6	110325140	110325141	chr6:110325141:C:T	rs781009413	C	T	C	SOX2_HMG_3	35	0	-	0	0	.
chr6	110482333	110482334	chr6:110482334:T:G	rs2494545	T	G	G	SOX2_HMG_3	23	0	-	0	0	.
chr6	111278010	111278011	chr6:111278011:C:T	rs79788276	C	T	C	SOX2_HMG_3	-7	0	-	0	0	.
chr6	111485148	111485149	chr6:111485149:G:A	rs17510346	G	A	G	SOX2_HMG_3	27	0	-	0	0	.
chr6	111662614	111662615	chr6:111662615:A:G	rs9320374	A	G	A	SOX2_HMG_3	-6	0	-	0	0	.
chr6	111747628	111747629	chr6:111747629:A:G	rs76693641	A	G	A	SOX2_HMG_3	1	1	+	7.862886528828845	6.031238938749555	TATCATTGGAAGTGATG
chr6	111830771	111830772	chr6:111830772:T:A	rs9487729	T	A	A	SOX2_HMG_3	-19	0	+	0	0	.
chr6	111927357	111927358	chr6:111927358:G:C	rs73535650	G	C	G	SOX2_HMG_3	-4	0	+	0	0	.
chr6	112087908	112087909	chr6:112087909:T:C	rs149880190	T	C	T	SOX2_HMG_3	6	1	+	3.679434237956257	-3.2293205413589625	GAACAATGGCGTTGAGC
chr6	112214880	112214881	chr6:112214881:A:G	rs189545465	A	G	A	SOX2_HMG_3	21	0	+	0	0	.
chr6	112332687	112332688	chr6:112332688:C:T	rs9398305	C	T	C	SOX2_HMG_3	15	1	+	4.7660168947314645	7.608726050908323	AGTCAAAGTCAGTGACA
chr6	112503894	112503895	chr6:112503895:A:T	rs1276553	A	T	T	SOX2_HMG_3	-16	0	-	0	0	.
chr6	112692124	112692125	chr6:112692125:G:A	rs12209591	G	A	G	SOX2_HMG_3	26	0	-	0	0	.
chr6	112880567	112880568	chr6:112880568:A:C	rs6905481	A	C	A	SOX2_HMG_3	11	1	-	2.6768325725103415	1.2597526032903925	GCACAGTGGTATTGAGT
chr6	112939840	112939841	chr6:112939841:G:T	rs2795582	G	T	T	SOX2_HMG_3	-18	0	-	0	0	.
chr6	113122504	113122505	chr6:113122505:T:C	rs2473937	T	C	T	SOX2_HMG_3	19	0	+	0	0	.
chr6	113125953	113125954	chr6:113125954:A:G	rs141758798	A	G	A	SOX2_HMG_3	1	1	-	5.8505897328245275	5.8505897328245275	GTTCAATGACATGGAAA
chr6	113450071	113450072	chr6:113450072:A:G	rs9320456	A	G	A	SOX2_HMG_3	10	1	+	12.210510915144779	5.30175613582956	TAACAATGCTATTGAAG
chr6	113456640	113456641	chr6:113456641:C:T	rs73765209	C	T	C	SOX2_HMG_3	-15	0	+	0	0	.
chr6	113456655	113456656	chr6:113456656:G:A	rs2142641	G	A	A	SOX2_HMG_3	0	1	+	5.592619906117408	5.372025627032114	GGTCAATAATACTGAAG
chr6	113846738	113846739	chr6:113846739:A:T	rs4132138	A	T	T	SOX2_HMG_3	6	1	-	9.832476154065317	2.9237213747500963	AGTCAATGTTCTTGATA
chr6	113881777	113881778	chr6:113881778:A:G	rs113177884	A	G	A	SOX2_HMG_3	29	0	+	0	0	.
chr6	113901185	113901186	chr6:113901186:G:T	rs2810159	G	T	T	SOX2_HMG_3	35	0	-	0	0	.
chr6	113901195	113901196	chr6:113901196:A:T	rs2615512	A	T	T	SOX2_HMG_3	25	0	-	0	0	.
chr6	114011753	114011754	chr6:114011754:T:C	rs6924680	T	C	C	SOX2_HMG_3	-2	0	-	0	0	.
chr6	114328674	114328675	chr6:114328675:C:T	rs12216474	C	T	C	SOX2_HMG_3	-4	0	-	0	0	.
chr6	114992592	114992593	chr6:114992593:T:C	rs3932658	T	C	C	SOX2_HMG_3	26	0	-	0	0	.
chr6	115046929	115046930	chr6:115046930:G:A	rs147608072	G	A	G	SOX2_HMG_3	13	1	+	4.235074597341358	-2.673680181973863	ATTCCATTTTAGTGAAG
chr6	115330151	115330152	chr6:115330152:G:C	rs4335017	G	C	G	SOX2_HMG_3	25	0	+	0	0	.
chr6	115582423	115582424	chr6:115582424:T:C	rs9400854	T	C	T	SOX2_HMG_3	35	0	-	0	0	.
chr6	115702357	115702358	chr6:115702358:C:T	rs9387356	C	T	T	SOX2_HMG_3	-8	0	-	0	0	.
chr6	116248945	116248946	chr6:116248946:G:T	rs957593490	G	T	G	SOX2_HMG_3	-9	0	+	0	0	.
chr6	116450350	116450351	chr6:116450351:G:T	rs12664607	G	T	G	SOX2_HMG_3	-17	0	+	0	0	.
chr6	116568412	116568413	chr6:116568413:T:G	rs980214	T	G	G	SOX2_HMG_3	-2	0	-	0	0	.
chr6	117127863	117127864	chr6:117127864:C:A	rs783372	C	A	C	SOX2_HMG_3	26	0	+	0	0	.
chr6	117426170	117426171	chr6:117426171:G:C	rs72969454	G	C	G	SOX2_HMG_3	15	1	+	3.614884477699225	2.4395513397899897	AAGCAATGCAACTGAGA
chr6	117562519	117562520	chr6:117562520:A:T	rs117322147	A	T	A	SOX2_HMG_3	7	1	+	5.629979542454215	6.314056158282014	GATCAACATAATTGAGA
chr6	117591732	117591733	chr6:117591733:G:T	rs36051454	G	T	G	SOX2_HMG_3	35	0	+	0	0	.
chr6	117669121	117669122	chr6:117669122:G:A	rs543276491	G	A	G	SOX2_HMG_3	-8	0	+	0	0	.
chr6	118324215	118324216	chr6:118324216:C:T	rs9489341	C	T	C	SOX2_HMG_3	3	1	+	5.407825073726688	-1.5009297055885316	GACCAAAGGCATTGATT
chr6	118764914	118764915	chr6:118764915:C:T	rs574822436	C	T	C	SOX2_HMG_3	25	0	+	0	0	.
chr6	119119166	119119167	chr6:119119167:G:C	rs1935819	G	C	G	SOX2_HMG_3	21	0	-	0	0	.
chr6	119132172	119132173	chr6:119132173:G:C	rs1891541	G	C	G	SOX2_HMG_3	-7	0	+	0	0	.
chr6	119547664	119547665	chr6:119547665:C:T	rs7741053	C	T	C	SOX2_HMG_3	11	1	-	3.9802666946099543	-1.2953448344024439	AGTCAATGGAAGAGTTG
chr6	119814741	119814742	chr6:119814742:T:C	rs9374834	T	C	T	SOX2_HMG_3	9	1	+	4.193972648842214	3.3873025149051683	AATCAATTATTTTGTTC
chr6	120197538	120197539	chr6:120197539:T:C	rs261771	T	C	C	SOX2_HMG_3	28	0	+	0	0	.
chr6	120805335	120805336	chr6:120805336:C:T	rs2789074	C	T	T	SOX2_HMG_3	11	1	-	5.015135493775455	-0.2604760352369435	GAACAATGTAAGTAATG
chr6	120971902	120971903	chr6:120971903:T:C	rs9320784	T	C	T	SOX2_HMG_3	-6	0	-	0	0	.
chr6	121334970	121334971	chr6:121334971:G:A	rs141141160	G	A	G	SOX2_HMG_3	-4	0	+	0	0	.
chr6	121383262	121383263	chr6:121383263:G:C	rs9490226	G	C	g	SOX2_HMG_3	34	0	+	0	0	.
chr6	121443111	121443112	chr6:121443112:A:C	rs10456940	A	C	a	SOX2_HMG_3	30	0	+	0	0	.
chr6	121488303	121488304	chr6:121488304:G:A	rs4946572	G	A	G	SOX2_HMG_3	17	0	+	0	0	.
chr6	121523204	121523205	chr6:121523205:C:A	rs4143301	C	A	A	SOX2_HMG_3	33	0	-	0	0	.
chr6	121523228	121523229	chr6:121523229:G:A	rs115147666	G	A	G	SOX2_HMG_3	9	1	-	4.38157438024896	5.188244514186006	TAACAGTGTCAGTGATT
chr6	121678279	121678280	chr6:121678280:A:C	rs6914088	A	C	C	SOX2_HMG_3	-20	0	-	0	0	.
chr6	121826578	121826579	chr6:121826579:G:A	rs9401454	G	A	G	SOX2_HMG_3	13	1	+	4.8574696163193725	-2.051285162995848	AATCACTGGAAGTGAGC
chr6	121836257	121836258	chr6:121836258:A:G	rs2269582	A	G	A	SOX2_HMG_3	-17	0	+	0	0	.
chr6	121836307	121836308	chr6:121836308:G:A	rs78581308	G	A	G	SOX2_HMG_3	33	0	+	0	0	.
chr6	122016161	122016162	chr6:122016162:C:T	rs7341314	C	T	T	SOX2_HMG_3	-15	0	-	0	0	.
chr6	122604852	122604853	chr6:122604853:A:G	chr6:122604853:A:G	A	G	A	SOX2_HMG_3	-8	0	+	0	0	.
chr6	122654812	122654813	chr6:122654813:A:G	rs12205720	A	G	A	SOX2_HMG_3	24	0	+	0	0	.
chr6	122714292	122714293	chr6:122714293:G:A	rs9398693	G	A	G	SOX2_HMG_3	26	0	+	0	0	.
chr6	122803358	122803359	chr6:122803359:A:G	rs6936183	A	G	A	SOX2_HMG_3	21	0	-	0	0	.
chr6	122803386	122803387	chr6:122803387:G:A	rs6936666	G	A	G	SOX2_HMG_3	-7	0	-	0	0	.
chr6	122846232	122846233	chr6:122846233:A:G	rs12332942	A	G	A	SOX2_HMG_3	15	1	-	6.131368848443103	3.2886596922662448	AACCAAAGTTATTGATT
chr6	122999632	122999633	chr6:122999633:A:G	rs11154134	A	G	A	SOX2_HMG_3	-5	0	+	0	0	.
chr6	122999667	122999668	chr6:122999668:A:C	rs11154135	A	C	A	SOX2_HMG_3	30	0	+	0	0	.
chr6	123307141	123307142	chr6:123307142:T:C	rs9320926	T	C	N	SOX2_HMG_3	2	1	+	5.756091248317217	0.7527191780016296	AATAAATGTTATTGGTC
chr6	124000893	124000894	chr6:124000894:C:A	rs7775695	C	A	A	SOX2_HMG_3	35	0	+	0	0	.
chr6	124123980	124123981	chr6:124123981:C:A	rs76236311	C	A	C	SOX2_HMG_3	1	1	-	4.336874111997005	3.1624778495529795	GGCCAGTGATATTGATG
chr6	124123994	124123995	chr6:124123995:T:C	rs163297	T	C	C	SOX2_HMG_3	-13	0	-	0	0	.
chr6	124148908	124148909	chr6:124148909:G:C	rs9388306	G	C	G	SOX2_HMG_3	23	0	-	0	0	.
chr6	124371408	124371409	chr6:124371409:G:A	rs2208814	G	A	G	SOX2_HMG_3	-14	0	-	0	0	.
chr6	124546811	124546812	chr6:124546812:G:A	rs991884	G	A	G	SOX2_HMG_3	0	1	+	2.77233236744123	2.551738088355936	GGACATTGGAAGTGATA
chr6	124546836	124546837	chr6:124546837:G:A	rs627547	G	A	G	SOX2_HMG_3	25	0	+	0	0	.
chr6	124599693	124599694	chr6:124599694:C:G	rs17052134	C	G	C	SOX2_HMG_3	7	1	-	4.828858868216145	-1.9039833432198303	ATTCAATGATATTCACA
chr6	124666092	124666093	chr6:124666093:G:A	rs972895	G	A	A	SOX2_HMG_3	-11	0	-	0	0	.
chr6	124964474	124964475	chr6:124964475:C:T	rs143153549	C	T	C	SOX2_HMG_3	34	0	-	0	0	.
chr6	125197931	125197932	chr6:125197932:G:A	rs17052846	G	A	G	SOX2_HMG_3	17	0	+	0	0	.
chr6	125220575	125220576	chr6:125220576:A:T	rs1557053	A	T	A	SOX2_HMG_3	28	0	-	0	0	.
chr6	125316473	125316474	chr6:125316474:A:G	rs72613295	A	G	A	SOX2_HMG_3	31	0	-	0	0	.
chr6	125700288	125700289	chr6:125700289:A:T	rs926853	A	T	T	SOX2_HMG_3	0	1	+	6.708017404854569	6.046215804179877	ACTCAATGTCAGTTATG
chr6	125985497	125985498	chr6:125985498:G:C	rs7755633	G	C	G	SOX2_HMG_3	1	1	-	2.927128621558016	4.10152488400204	GCGCAGTGGTAGTGATT
chr6	126188531	126188532	chr6:126188532:A:G	rs9491575	A	G	A	SOX2_HMG_3	17	0	+	0	0	.
chr6	126336325	126336326	chr6:126336326:A:G	rs4897175	A	G	A	SOX2_HMG_3	-6	0	-	0	0	.
chr6	127455893	127455894	chr6:127455894:T:C	rs982306	T	C	C	SOX2_HMG_3	28	0	+	0	0	.
chr6	127579144	127579145	chr6:127579145:A:G	rs60059762	A	G	A	SOX2_HMG_3	-19	0	-	0	0	.
chr6	127690305	127690306	chr6:127690306:C:T	chr6:127690306:C:T	C	T	c	SOX2_HMG_3	34	0	-	0	0	.
chr6	127690318	127690319	chr6:127690319:C:T	chr6:127690319:C:T	C	T	c	SOX2_HMG_3	21	0	-	0	0	.
chr6	127690327	127690328	chr6:127690328:A:G	chr6:127690328:A:G	A	G	a	SOX2_HMG_3	12	1	-	3.68179753842194	-3.2269572408932796	CAACAATGAAAATGAAG
chr6	127690330	127690331	chr6:127690331:T:C	rs78591248	T	C	t	SOX2_HMG_3	9	1	-	3.68179753842194	-0.898977490731429	CAACAATGAAAATGAAG
chr6	127932691	127932692	chr6:127932692:T:C	rs1044512983	T	C	T	SOX2_HMG_3	1	1	-	8.913991059814352	7.082343469735059	CATCAATATCAGTGGTA
chr6	128494704	128494705	chr6:128494705:G:A	rs13196790	G	A	G	SOX2_HMG_3	29	0	+	0	0	.
chr6	128518886	128518887	chr6:128518887:C:A	rs1456357197	C	A	C	SOX2_HMG_3	-11	0	+	0	0	.
chr6	129318408	129318409	chr6:129318409:C:T	chr6:129318409:C:T	C	T	C	SOX2_HMG_3	-7	0	-	0	0	.
chr6	129318411	129318412	chr6:129318412:C:T	rs113995977	C	T	C	SOX2_HMG_3	-10	0	-	0	0	.
chr6	129526827	129526828	chr6:129526828:A:G	rs2006724	A	G	A	SOX2_HMG_3	-6	0	+	0	0	.
chr6	129749170	129749171	chr6:129749171:G:T	rs17057773	G	T	G	SOX2_HMG_3	22	0	-	0	0	.
chr6	130245536	130245537	chr6:130245537:C:T	rs55737947	C	T	C	SOX2_HMG_3	22	0	-	0	0	.
chr6	130245542	130245543	chr6:130245543:A:G	rs9492501	A	G	a	SOX2_HMG_3	16	1	-	3.5876523015605613	2.390880248420207	GTGCAATAGCAGTGTTT
chr6	130309783	130309784	chr6:130309784:T:C	rs73615694	T	C	T	SOX2_HMG_3	-14	0	-	0	0	.
chr6	130431746	130431747	chr6:130431747:G:A	rs4897423	G	A	A	SOX2_HMG_3	18	0	+	0	0	.
chr6	130437977	130437978	chr6:130437978:C:G	rs10456986	C	G	G	SOX2_HMG_3	-16	0	-	0	0	.
chr6	130598324	130598325	chr6:130598325:A:G	rs145275245	A	G	A	SOX2_HMG_3	11	1	-	6.851123511581857	0.15843201334951046	TTGCAATGGCATTGTTT
chr6	130598326	130598327	chr6:130598327:G:C	rs77437540	G	C	G	SOX2_HMG_3	9	1	-	6.851123511581857	1.2184432744188056	TTGCAATGGCATTGTTT
chr6	130612058	130612059	chr6:130612059:T:C	rs78078826	T	C	T	SOX2_HMG_3	-8	0	-	0	0	.
chr6	130783680	130783681	chr6:130783681:T:G	rs9492719	T	G	T	SOX2_HMG_3	-3	0	+	0	0	.
chr6	131415074	131415075	chr6:131415075:C:T	rs58406766	C	T	C	SOX2_HMG_3	-7	0	-	0	0	.
chr6	131498267	131498268	chr6:131498268:C:T	rs78997368	C	T	c	SOX2_HMG_3	19	0	-	0	0	.
chr6	131982535	131982536	chr6:131982536:C:T	rs11154656	C	T	C	SOX2_HMG_3	-9	0	+	0	0	.
chr6	131998765	131998766	chr6:131998766:G:A	rs233941	G	A	G	SOX2_HMG_3	-11	0	-	0	0	.
chr6	132053814	132053815	chr6:132053815:A:G	rs191234828	A	G	A	SOX2_HMG_3	12	1	-	3.60776257619226	-3.3009922031229606	GGACAAATTCATTGATG
chr6	132108101	132108102	chr6:132108102:T:C	rs737454	T	C	T	SOX2_HMG_3	5	1	-	4.298486811413577	-2.610267967901644	TCTCAATCCAAGTGATG
chr6	132131692	132131693	chr6:132131693:G:A	rs75859648	G	A	G	SOX2_HMG_3	18	0	+	0	0	.
chr6	132198105	132198106	chr6:132198106:A:C	rs4895932	A	C	C	SOX2_HMG_3	19	0	-	0	0	.
chr6	132295514	132295515	chr6:132295515:C:T	rs9493275	C	T	c	SOX2_HMG_3	28	0	+	0	0	.
chr6	132323259	132323260	chr6:132323260:T:C	rs17061185	T	C	C	SOX2_HMG_3	6	1	+	6.29274190923658	-0.6160128700786405	GGTCAATGGAATTAAAT
chr6	132333691	132333692	chr6:132333692:C:T	rs11968833	C	T	C	SOX2_HMG_3	-1	0	+	0	0	.
chr6	132728833	132728834	chr6:132728834:G:A	rs45553436	G	A	G	SOX2_HMG_3	9	1	-	5.231641398902838	6.0383115328398835	ATGCAATGCCAGTGACT
chr6	132758654	132758655	chr6:132758655:C:T	rs6911025	C	T	C	SOX2_HMG_3	-12	0	-	0	0	.
chr6	132814693	132814694	chr6:132814694:A:G	rs888345218	A	G	A	SOX2_HMG_3	-16	0	+	0	0	.
chr6	132814724	132814725	chr6:132814725:T:G	rs12202302	T	G	T	SOX2_HMG_3	15	1	+	5.7185831312292414	4.0512071129616185	AGTCAATGCTTTTGTTT
chr6	133040227	133040228	chr6:133040228:C:T	rs184222634	C	T	C	SOX2_HMG_3	2	1	-	11.379692911353912	11.379692911353912	AAGCAATTGTAGTGATG
chr6	133528650	133528651	chr6:133528651:A:G	rs3822939	A	G	G	SOX2_HMG_3	4	1	+	2.6841585517763926	-4.224596227538828	AGACAATGGTTGTGATC
chr6	133788706	133788707	chr6:133788707:A:G	chr6:133788707:A:G	A	G	a	SOX2_HMG_3	30	0	-	0	0	.
chr6	134146361	134146362	chr6:134146362:A:T	rs9483658	A	T	A	SOX2_HMG_3	-19	0	+	0	0	.
chr6	134382089	134382090	chr6:134382090:A:G	rs78156561	A	G	A	SOX2_HMG_3	6	1	-	8.600950387567368	1.6921956082521463	GAACAATAGCAGTGAAA
chr6	134511516	134511517	chr6:134511517:G:A	rs1459464036	G	A	G	SOX2_HMG_3	33	0	+	0	0	.
chr6	134585528	134585529	chr6:134585529:T:G	rs9483723	T	G	T	SOX2_HMG_3	36	0	+	0	0	.
chr6	134939164	134939165	chr6:134939165:T:C	rs7754722	T	C	C	SOX2_HMG_3	19	0	-	0	0	.
chr6	134997715	134997716	chr6:134997716:A:T	rs4895439	A	T	T	SOX2_HMG_3	27	0	+	0	0	.
chr6	135212145	135212146	chr6:135212146:T:G	rs210946	T	G	G	SOX2_HMG_3	12	1	-	2.8585259856219754	2.8585259856219754	CATCAATGGTATATAAA
chr6	135217453	135217454	chr6:135217454:G:A	rs2179308	G	A	G	SOX2_HMG_3	-3	0	+	0	0	.
chr6	135583326	135583327	chr6:135583327:G:C	rs146323116	G	C	G	SOX2_HMG_3	28	0	+	0	0	.
chr6	135600433	135600434	chr6:135600434:C:T	rs114986612	C	T	c	SOX2_HMG_3	-15	0	+	0	0	.
chr6	135901868	135901869	chr6:135901869:T:A	rs75358787	T	A	T	SOX2_HMG_3	-11	0	+	0	0	.
chr6	135901897	135901898	chr6:135901898:C:A	rs75803662	C	A	C	SOX2_HMG_3	18	0	+	0	0	.
chr6	136181488	136181489	chr6:136181489:C:T	rs9402793	C	T	T	SOX2_HMG_3	30	0	-	0	0	.
chr6	136508891	136508892	chr6:136508892:T:C	rs142027878	T	C	T	SOX2_HMG_3	-2	0	-	0	0	.
chr6	137233841	137233842	chr6:137233842:C:T	rs73561906	C	T	C	SOX2_HMG_3	3	1	+	5.6068962258170725	-1.3018585534981477	CACCAATGTTATTTATT
chr6	137427711	137427712	chr6:137427712:A:G	rs6929588	A	G	G	SOX2_HMG_3	10	1	+	5.4586824537875085	-1.4500723255277128	AAACCATGGCATTGAGG
chr6	137427724	137427725	chr6:137427725:T:C	rs115177216	T	C	T	SOX2_HMG_3	23	0	+	0	0	.
chr6	137811307	137811308	chr6:137811308:T:G	rs9494868	T	G	G	SOX2_HMG_3	16	1	+	3.0358823926502443	3.838952834426434	AACCAAAGCCAGTGATT
chr6	137869678	137869679	chr6:137869679:C:G	rs5029931	C	G	C	SOX2_HMG_3	-2	0	+	0	0	.
chr6	137912395	137912396	chr6:137912396:A:G	rs145866478	A	G	G	SOX2_HMG_3	5	1	+	12.08881202356035	5.180057244245128	TATCAATATAATTGAAA
chr6	138105602	138105603	chr6:138105603:A:G	rs55849258	A	G	A	SOX2_HMG_3	-12	0	-	0	0	.
chr6	138480647	138480648	chr6:138480648:T:G	rs181532138	T	G	T	SOX2_HMG_3	16	1	-	6.551441102268708	4.825286223742435	ATTCAATGCTATTAAAA
chr6	138480660	138480661	chr6:138480661:G:A	rs76618647	G	A	A	SOX2_HMG_3	3	1	-	6.551441102268708	-0.3573136770465126	ATTCAATGCTATTAAAA
chr6	138508017	138508018	chr6:138508018:A:G	rs28702636	A	G	G	SOX2_HMG_3	36	0	-	0	0	.
chr6	138843396	138843397	chr6:138843397:T:G	rs868825909	T	G	T	SOX2_HMG_3	5	1	-	5.014950970893301	-1.8938038084219204	CATCAATTAACTTGAAA
chr6	138943792	138943793	chr6:138943793:T:G	rs6899737	T	G	G	SOX2_HMG_3	15	1	+	6.989838775529521	5.322462757261898	AAACAATGTCTTTGATA
chr6	139155209	139155210	chr6:139155210:C:T	rs9403046	C	T	T	SOX2_HMG_3	7	1	-	4.551711946477834	1.8229248259164987	CATAAATGCCATTGTGT
chr6	139202216	139202217	chr6:139202217:C:T	rs115144400	C	T	C	SOX2_HMG_3	4	1	+	4.022330197051602	4.022330197051602	GAACCATTTCAGTGATG
chr6	139241302	139241303	chr6:139241303:G:C	rs10499208	G	C	C	SOX2_HMG_3	-15	0	-	0	0	.
chr6	139392951	139392952	chr6:139392952:C:T	rs149457220	C	T	C	SOX2_HMG_3	5	1	-	3.205577331386794	10.114332110702016	ATGCAGTGTAATTGATG
chr6	139406721	139406722	chr6:139406722:T:C	rs74539375	T	C	T	SOX2_HMG_3	-7	0	+	0	0	.
chr6	139494659	139494660	chr6:139494660:G:A	rs9389690	G	A	G	SOX2_HMG_3	5	1	-	1.3671936391018606	1.3671936391018606	GGCCACTGCTAGTGAGG
chr6	139494670	139494671	chr6:139494671:A:T	rs9403082	A	T	T	SOX2_HMG_3	-6	0	-	0	0	.
chr6	139501184	139501185	chr6:139501185:A:G	rs62440903	A	G	A	SOX2_HMG_3	5	1	+	5.462282145948363	-1.4464726333668567	AAACAATGGTATTTAGT
chr6	139501189	139501190	chr6:139501190:A:G	rs4895563	A	G	A	SOX2_HMG_3	10	1	+	5.462282145948363	-1.4464726333668576	AAACAATGGTATTTAGT
chr6	139545232	139545233	chr6:139545233:C:G	rs17586789	C	G	C	SOX2_HMG_3	18	0	+	0	0	.
chr6	139638667	139638668	chr6:139638668:T:C	rs6940157	T	C	C	SOX2_HMG_3	-17	0	-	0	0	.
chr6	139764157	139764158	chr6:139764158:T:C	rs7774968	T	C	C	SOX2_HMG_3	-14	0	+	0	0	.
chr6	139965098	139965099	chr6:139965099:A:C	rs596878	A	C	A	SOX2_HMG_3	15	1	+	4.4951129958303015	2.8873062763701656	CTTTAATGATAGTGAAA
chr6	140438610	140438611	chr6:140438611:G:A	rs72979812	G	A	G	SOX2_HMG_3	36	0	-	0	0	.
chr6	140541642	140541643	chr6:140541643:G:C	chr6:140541643:G:C	G	C	G	SOX2_HMG_3	-17	0	+	0	0	.
chr6	140858789	140858790	chr6:140858790:G:A	rs650254	G	A	G	SOX2_HMG_3	-2	0	+	0	0	.
chr6	141395585	141395586	chr6:141395586:T:C	rs2105047	T	C	T	SOX2_HMG_3	33	0	+	0	0	.
chr6	141483127	141483128	chr6:141483128:T:C	rs74331666	T	C	T	SOX2_HMG_3	31	0	+	0	0	.
chr6	142271676	142271677	chr6:142271677:G:A	rs186222406	G	A	G	SOX2_HMG_3	-17	0	-	0	0	.
chr6	142320418	142320419	chr6:142320419:A:G	rs9385993	A	G	A	SOX2_HMG_3	31	0	-	0	0	.
chr6	142320468	142320469	chr6:142320469:T:C	rs12189801	T	C	T	SOX2_HMG_3	-19	0	-	0	0	.
chr6	142841887	142841888	chr6:142841888:A:G	rs6912129	A	G	A	SOX2_HMG_3	5	1	+	4.381460663779366	-2.527294115535854	CAGCAATTAAATTGTGT
chr6	143079530	143079531	chr6:143079531:A:G	rs9386021	A	G	G	SOX2_HMG_3	5	1	+	11.996060232495068	5.087305453179847	AATCAATGGGATTGATA
chr6	143328846	143328847	chr6:143328847:A:T	rs6941707	A	T	A	SOX2_HMG_3	4	1	+	3.564184538768776	-3.3445702405464437	TATCATGGTTATTGATT
chr6	143345294	143345295	chr6:143345295:A:T	rs6932294	A	T	A	SOX2_HMG_3	29	0	-	0	0	.
chr6	143578498	143578499	chr6:143578499:C:T	rs6919613	C	T	C	SOX2_HMG_3	-18	0	-	0	0	.
chr6	143630729	143630730	chr6:143630730:A:C	rs7741506	A	C	A	SOX2_HMG_3	12	1	-	4.384352929610917	-2.5244018497043035	TATAAATGGCATTGTAC
chr6	143701029	143701030	chr6:143701030:A:G	rs9496740	A	G	A	SOX2_HMG_3	-6	0	-	0	0	.
chr6	143949780	143949781	chr6:143949781:T:G	rs76015148	T	G	T	SOX2_HMG_3	20	0	+	0	0	.
chr6	144021084	144021085	chr6:144021085:C:A	rs77516841	C	A	C	SOX2_HMG_3	33	0	-	0	0	.
chr6	144131433	144131434	chr6:144131434:A:C	rs4463275	A	C	A	SOX2_HMG_3	7	1	-	7.860038180068321	9.904748684801856	CATCACTTTTATTGAAA
chr6	144133266	144133267	chr6:144133267:C:A	rs1040464	C	A	A	SOX2_HMG_3	23	0	-	0	0	.
chr6	144278738	144278739	chr6:144278739:G:A	rs664721	G	A	A	SOX2_HMG_3	11	1	-	2.459670288864511	9.152361787096858	GCTCAATGTTTCTGATG
chr6	144719006	144719007	chr6:144719007:A:G	rs75376745	A	G	A	SOX2_HMG_3	32	0	+	0	0	.
chr6	144954093	144954094	chr6:144954094:G:A	rs9390264	G	A	A	SOX2_HMG_3	8	1	-	4.353817160791017	5.22555351342688	AAGCAATGCCTTTGAAT
chr6	145147692	145147693	chr6:145147693:C:T	chr6:145147693:C:T	C	T	C	SOX2_HMG_3	30	0	-	0	0	.
chr6	145280423	145280424	chr6:145280424:T:C	rs1321529	T	C	T	SOX2_HMG_3	9	1	+	8.247042882829687	7.440372748892642	AATCAATTGTATTTAAA
chr6	145864863	145864864	chr6:145864864:C:A	rs111329046	C	A	C	SOX2_HMG_3	33	0	+	0	0	.
chr6	146211735	146211736	chr6:146211736:T:C	rs990519	T	C	C	SOX2_HMG_3	6	1	+	3.1683748260001603	-3.7403799533150592	GAACAATGGTATTTGTT
chr6	146340135	146340136	chr6:146340136:C:G	rs145893053	C	G	C	SOX2_HMG_3	9	1	+	1.933570125426802	-3.69911011173625	AATCAATGCCAGGTATG
chr6	146355271	146355272	chr6:146355272:T:C	rs725186	T	C	T	SOX2_HMG_3	11	1	+	2.4431382314513623	-4.249553266780984	GATTAGTGTCATTGATC
chr6	146388885	146388886	chr6:146388886:T:C	rs144124177	T	C	T	SOX2_HMG_3	-4	0	+	0	0	.
chr6	146680272	146680273	chr6:146680273:G:A	rs1417588	G	A	G	SOX2_HMG_3	13	1	+	6.339561799803101	-0.5691929795121197	GCTCAATGCTGTTGAGA
chr6	146895415	146895416	chr6:146895416:T:A	rs2224906	T	A	A	SOX2_HMG_3	-7	0	+	0	0	.
chr6	147063612	147063613	chr6:147063613:A:G	rs17076616	A	G	A	SOX2_HMG_3	-18	0	-	0	0	.
chr6	147322792	147322793	chr6:147322793:A:T	rs561450709	A	T	A	SOX2_HMG_3	-10	0	-	0	0	.
chr6	147522719	147522720	chr6:147522720:A:G	rs607474	A	G	A	SOX2_HMG_3	20	0	-	0	0	.
chr6	147528904	147528905	chr6:147528905:T:C	rs77628336	T	C	T	SOX2_HMG_3	5	1	-	7.9760898125365784	1.0673350332213565	CATCAATGGTACTGTTT
chr6	147584530	147584531	chr6:147584531:C:T	rs373130391	C	T	C	SOX2_HMG_3	25	0	-	0	0	.
chr6	147621274	147621275	chr6:147621275:A:G	rs10872600	A	G	A	SOX2_HMG_3	0	1	+	2.9188709208136574	3.139465199898951	AAACAGTGACAGTGAGA
chr6	148235718	148235719	chr6:148235719:T:A	rs9497977	T	A	A	SOX2_HMG_3	24	0	+	0	0	.
chr6	148423469	148423470	chr6:148423470:C:T	rs114795033	C	T	C	SOX2_HMG_3	0	1	+	6.205702952969325	6.068373974920661	CAACAATAATAGTGACA
chr6	148616951	148616952	chr6:148616952:T:C	rs7768910	T	C	T	SOX2_HMG_3	-15	0	-	0	0	.
chr6	148913134	148913135	chr6:148913135:T:G	rs9399670	T	G	G	SOX2_HMG_3	5	1	-	2.7265196669798257	-4.182235112335395	AGCCAATGGCATTGCAA
chr6	148919256	148919257	chr6:148919257:G:A	rs12201109	G	A	G	SOX2_HMG_3	-1	0	-	0	0	.
chr6	148950117	148950118	chr6:148950118:T:G	rs2500511	T	G	G	SOX2_HMG_3	-3	0	-	0	0	.
chr6	149108309	149108310	chr6:149108310:G:T	rs12216011	G	T	G	SOX2_HMG_3	28	0	+	0	0	.
chr6	149177246	149177247	chr6:149177247:A:G	rs7751665	A	G	G	SOX2_HMG_3	11	1	-	5.554352067697572	-1.138339430534774	AAGCAATTGGATTGATT
chr6	149206531	149206532	chr6:149206532:C:A	rs607071	C	A	A	SOX2_HMG_3	23	0	-	0	0	.
chr6	149285751	149285752	chr6:149285752:G:T	rs9485371	G	T	T	SOX2_HMG_3	-16	0	+	0	0	.
chr6	149289633	149289634	chr6:149289634:C:T	rs76305607	C	T	C	SOX2_HMG_3	29	0	-	0	0	.
chr6	149314663	149314664	chr6:149314664:T:C	rs201641387	T	C	t	SOX2_HMG_3	27	0	+	0	0	.
chr6	149457065	149457066	chr6:149457066:A:G	rs2744430	A	G	A	SOX2_HMG_3	4	1	+	4.258477271930944	-2.6502775073842764	ACTCAATTTCACTGAAT
chr6	149887609	149887610	chr6:149887610:A:T	rs79782857	A	T	A	SOX2_HMG_3	15	1	-	5.465714141387824	4.230811704671103	GATCAATGTTTCTGATG
chr6	150269897	150269898	chr6:150269898:C:T	rs13200391	C	T	C	SOX2_HMG_3	30	0	+	0	0	.
chr6	150273226	150273227	chr6:150273227:T:C	rs789481	T	C	C	SOX2_HMG_3	10	1	-	6.437113942036073	-0.4716408372791485	AAGCAATGATATTGTCC
chr6	150404272	150404273	chr6:150404273:T:C	rs115817957	T	C	T	SOX2_HMG_3	15	1	+	7.948824756354981	5.106115600178123	AATCCATAATATTGATA
chr6	150540276	150540277	chr6:150540277:G:A	rs9398015	G	A	G	SOX2_HMG_3	23	0	-	0	0	.
chr6	150601901	150601902	chr6:150601902:A:G	rs62432652	A	G	G	SOX2_HMG_3	11	1	-	2.1882144900265343	-4.5044770082058125	TATTAAAGGCATTGAAG
chr6	150668991	150668992	chr6:150668992:A:G	rs185172259	A	G	A	SOX2_HMG_3	10	1	+	4.26689956023409	-2.6418552190811306	ACTCCATGCCATTGTTA
chr6	150720215	150720216	chr6:150720216:C:T	rs9383542	C	T	C	SOX2_HMG_3	-17	0	-	0	0	.
chr6	150997097	150997098	chr6:150997098:C:T	rs115051576	C	T	C	SOX2_HMG_3	-18	0	-	0	0	.
chr6	151046241	151046242	chr6:151046242:C:A	rs13195153	C	A	C	SOX2_HMG_3	0	1	-	5.030427617544269	4.14803173778428	GATTAATAGCAGTGAAT
chr6	151063653	151063654	chr6:151063654:G:A	chr6:151063654:G:A	G	A	G	SOX2_HMG_3	22	0	-	0	0	.
chr6	151242436	151242437	chr6:151242437:A:G	rs11967057	A	G	A	SOX2_HMG_3	23	0	-	0	0	.
chr6	151242439	151242440	chr6:151242440:A:G	rs6557123	A	G	A	SOX2_HMG_3	20	0	-	0	0	.
chr6	151254808	151254809	chr6:151254809:C:T	rs17080959	C	T	C	SOX2_HMG_3	-2	0	+	0	0	.
chr6	151254815	151254816	chr6:151254816:A:G	rs187019384	A	G	A	SOX2_HMG_3	5	1	+	3.5323914910693337	-3.3763632882458867	CAACAATGACAGAGATT
chr6	151254821	151254822	chr6:151254822:G:C	rs12195960	G	C	G	SOX2_HMG_3	11	1	+	3.5323914910693337	-1.7432200379430645	CAACAATGACAGAGATT
chr6	151284669	151284670	chr6:151284670:T:C	rs9383564	T	C	T	SOX2_HMG_3	30	0	-	0	0	.
chr6	151299453	151299454	chr6:151299454:A:G	rs9383565	A	G	G	SOX2_HMG_3	-3	0	-	0	0	.
chr6	151551312	151551313	chr6:151551313:G:T	rs9479068	G	T	G	SOX2_HMG_3	34	0	-	0	0	.
chr6	151551364	151551365	chr6:151551365:T:C	rs9371537	T	C	T	SOX2_HMG_3	-18	0	-	0	0	.
chr6	152096006	152096007	chr6:152096007:G:A	rs9341056	G	A	G	SOX2_HMG_3	-10	0	-	0	0	.
chr6	152097439	152097440	chr6:152097440:T:C	rs3778099	T	C	C	SOX2_HMG_3	29	0	-	0	0	.
chr6	152746791	152746792	chr6:152746792:G:A	rs17083008	G	A	A	SOX2_HMG_3	3	1	-	4.219855214888119	-2.6888995644271003	GAACAATGCAAGTGCTG
chr6	152876314	152876315	chr6:152876315:T:C	rs852649	T	C	C	SOX2_HMG_3	20	0	+	0	0	.
chr6	152952371	152952372	chr6:152952372:C:G	rs75026608	C	G	G	SOX2_HMG_3	-7	0	+	0	0	.
chr6	152952380	152952381	chr6:152952381:T:G	rs76914887	T	G	T	SOX2_HMG_3	2	1	+	4.03861479911534	0.1709999644372997	AGTCAATTCAAATGAAA
chr6	153027572	153027573	chr6:153027573:A:G	rs598662	A	G	G	SOX2_HMG_3	1	1	+	6.29021654512832	4.45856895504903	AAGCAATGGAAATGATG
chr6	153027606	153027607	chr6:153027607:T:C	rs598623	T	C	T	SOX2_HMG_3	35	0	+	0	0	.
chr6	153044548	153044549	chr6:153044549:C:T	rs150672936	C	T	C	SOX2_HMG_3	-3	0	-	0	0	.
chr6	153139973	153139974	chr6:153139974:T:C	rs635023	T	C	T	SOX2_HMG_3	1	1	-	2.8246446767950055	0.9929970867157156	GACCGATGCCAGTGAAG
chr6	153166908	153166909	chr6:153166909:T:C	rs12203312	T	C	T	SOX2_HMG_3	1	1	-	7.151660516701965	5.320012926622675	AATCAATGAAGTTGAGA
chr6	153684841	153684842	chr6:153684842:C:T	rs2350396	C	T	T	SOX2_HMG_3	-11	0	+	0	0	.
chr6	154039560	154039561	chr6:154039561:C:T	rs1799972	C	T	T	SOX2_HMG_3	-13	0	+	0	0	.
chr6	154056705	154056706	chr6:154056706:G:A	rs477589	G	A	G	SOX2_HMG_3	-10	0	+	0	0	.
chr6	154288038	154288039	chr6:154288039:C:T	rs7753809	C	T	c	SOX2_HMG_3	-11	0	-	0	0	.
chr6	154392685	154392686	chr6:154392686:T:C	rs11758486	T	C	T	SOX2_HMG_3	18	0	-	0	0	.
chr6	154537484	154537485	chr6:154537485:G:C	rs116817894	G	C	G	SOX2_HMG_3	-4	0	+	0	0	.
chr6	154690357	154690358	chr6:154690358:G:A	rs11968881	G	A	A	SOX2_HMG_3	-20	0	+	0	0	.
chr6	155137672	155137673	chr6:155137673:C:T	rs371975682	C	T	C	SOX2_HMG_3	29	0	-	0	0	.
chr6	155223262	155223263	chr6:155223263:T:C	rs4143683	T	C	C	SOX2_HMG_3	5	1	-	5.619647137412666	-1.2891076419025558	TATCAATAATATTAAGA
chr6	155260154	155260155	chr6:155260155:C:A	rs4869849	C	A	A	SOX2_HMG_3	33	0	+	0	0	.
chr6	155375579	155375580	chr6:155375580:A:G	rs9397246	A	G	A	SOX2_HMG_3	10	1	+	2.539249141068036	-4.369505638247183	GCCCCATGTCATTGATT
chr6	155862012	155862013	chr6:155862013:C:T	rs4463267	C	T	T	SOX2_HMG_3	-10	0	-	0	0	.
chr6	155917388	155917389	chr6:155917389:T:C	rs56405658	T	C	T	SOX2_HMG_3	5	1	-	1.8799343189126843	-5.028820460402535	TGTCAATGCTACAGATG
chr6	156376546	156376547	chr6:156376547:T:G	rs1377973	T	G	T	SOX2_HMG_3	6	1	+	7.27534555195224	0.3665907726370203	GATCAATGAATTTGAAT
chr6	156398650	156398651	chr6:156398651:G:A	rs7743967	G	A	G	SOX2_HMG_3	23	0	-	0	0	.
chr6	156503199	156503200	chr6:156503200:G:A	rs73569423	G	A	G	SOX2_HMG_3	35	0	-	0	0	.
chr6	156516320	156516321	chr6:156516321:T:C	rs117577781	T	C	T	SOX2_HMG_3	16	1	+	3.8034761854816668	2.6067041323413127	TCTCAAAGGAATTGAGT
chr6	156696542	156696543	chr6:156696543:C:G	rs6931988	C	G	C	SOX2_HMG_3	24	0	-	0	0	.
chr6	156868621	156868622	chr6:156868622:A:T	rs12213563	A	T	A	SOX2_HMG_3	12	1	-	3.3482768830951177	-3.560477896220102	CATGAATGGTACTGAAG
chr6	157007688	157007689	chr6:157007689:G:A	rs12206666	G	A	A	SOX2_HMG_3	24	0	+	0	0	.
chr6	157047006	157047007	chr6:157047007:T:G	rs17088057	T	G	T	SOX2_HMG_3	14	1	+	1.7374636026236574	0.2683598301368322	CAGCAATGCCTGTGTTG
chr6	157089233	157089234	chr6:157089234:A:G	rs77476846	A	G	A	SOX2_HMG_3	3	1	+	5.351785935027024	5.351785935027024	GGTAAATGTAATTGACA
chr6	157089406	157089407	chr6:157089407:A:G	rs17088104	A	G	A	SOX2_HMG_3	-18	0	-	0	0	.
chr6	157230851	157230852	chr6:157230852:T:G	rs148079503	T	G	T	SOX2_HMG_3	27	0	+	0	0	.
chr6	157432626	157432627	chr6:157432627:T:C	rs17165322	T	C	T	SOX2_HMG_3	-18	0	+	0	0	.
chr6	157598397	157598398	chr6:157598398:C:G	rs17447588	C	G	G	SOX2_HMG_3	27	0	-	0	0	.
chr6	157748922	157748923	chr6:157748923:C:T	rs7742219	C	T	C	SOX2_HMG_3	7	1	-	4.432592991101704	1.7038058705403698	GAGCCATGCTATTGTTA
chr6	157873707	157873708	chr6:157873708:T:A	chr6:157873708:T:A	T	A	T	SOX2_HMG_3	4	1	-	5.341409405295504	-1.5673453740197156	AAACAATATTATAGATG
chr6	158024964	158024965	chr6:158024965:C:T	rs74511933	C	T	C	SOX2_HMG_3	-10	0	+	0	0	.
chr6	158088599	158088600	chr6:158088600:G:A	rs149011599	G	A	G	SOX2_HMG_3	35	0	-	0	0	.
chr6	158474973	158474974	chr6:158474974:C:G	rs627967	C	G	C	SOX2_HMG_3	25	0	-	0	0	.
chr6	158783149	158783150	chr6:158783150:G:A	rs3103002	G	A	G	SOX2_HMG_3	34	0	+	0	0	.
chr6	158874306	158874307	chr6:158874307:T:C	rs10945568	T	C	c	SOX2_HMG_3	33	0	-	0	0	.
chr6	158972178	158972179	chr6:158972179:G:A	rs2235823	G	A	G	SOX2_HMG_3	-8	0	+	0	0	.
chr6	158978969	158978970	chr6:158978970:T:A	rs767378346	T	A	T	SOX2_HMG_3	-15	0	+	0	0	.
chr6	159178919	159178920	chr6:159178920:A:G	rs295327	A	G	G	SOX2_HMG_3	4	1	+	3.2121970766414614	-3.696557702673758	CAGCAATTCTCGTGATG
chr6	159488365	159488366	chr6:159488366:C:T	rs1890580	C	T	C	SOX2_HMG_3	-14	0	-	0	0	.
chr6	159529464	159529465	chr6:159529465:A:T	rs2073222	A	T	T	SOX2_HMG_3	33	0	+	0	0	.
chr6	159557750	159557751	chr6:159557751:A:T	rs240892	A	T	T	SOX2_HMG_3	5	1	+	6.69151036790978	-0.21724441140543904	AATCAATGATAGAGACG
chr6	160050158	160050159	chr6:160050159:T:G	rs8191818	T	G	T	SOX2_HMG_3	1	1	+	6.2767917187674565	7.45118798121148	TTCCAATGCCAGTGATT
chr6	160138315	160138316	chr6:160138316:C:T	rs117010682	C	T	C	SOX2_HMG_3	-16	0	+	0	0	.
chr6	160139791	160139792	chr6:160139792:G:A	rs34130495	G	A	G	SOX2_HMG_3	-6	0	-	0	0	.
chr6	160146895	160146896	chr6:160146896:G:T	rs3798167	G	T	G	SOX2_HMG_3	3	1	-	6.973614566016199	0.06485978670097875	TGACAATGGAATTGTTT
chr6	160272694	160272695	chr6:160272695:A:G	rs599507	A	G	G	SOX2_HMG_3	4	1	+	6.196619792084278	-0.712134987230942	CATCAATGTAAGAGAGA
chr6	160272703	160272704	chr6:160272704:G:C	rs599494	G	C	G	SOX2_HMG_3	13	1	+	6.196619792084278	-0.7121349872309423	CATCAATGTAAGAGAGA
chr6	160275679	160275680	chr6:160275680:C:T	rs139010364	C	T	C	SOX2_HMG_3	-5	0	+	0	0	.
chr6	160279736	160279737	chr6:160279737:T:C	rs2634658	T	C	C	SOX2_HMG_3	0	1	-	3.7068000693579166	3.9273943484432094	AATCAATAGTTGTGTAG
chr6	160279866	160279867	chr6:160279867:T:C	rs604258	T	C	T	SOX2_HMG_3	16	1	+	5.423448299113698	4.226676245973344	CATCGATGTCATTGTGT
chr6	160427134	160427135	chr6:160427135:A:C	rs2665357	A	C	C	SOX2_HMG_3	0	1	+	4.657073294825498	4.1326006721994695	AAGCAATGGAAGAGATG
chr6	161439442	161439443	chr6:161439443:T:G	chr6:161439443:T:G	T	G	T	SOX2_HMG_3	-13	0	+	0	0	.
chr6	161481121	161481122	chr6:161481122:T:C	rs2315314	T	C	T	SOX2_HMG_3	35	0	+	0	0	.
chr6	161518902	161518903	chr6:161518903:G:C	rs78600213	G	C	G	SOX2_HMG_3	25	0	+	0	0	.
chr6	161523738	161523739	chr6:161523739:A:G	rs518666	A	G	G	SOX2_HMG_3	15	1	+	7.577840668757304	7.145367087206403	AATCAATTTCATGGAAA
chr6	161646033	161646034	chr6:161646034:T:C	rs1314095690	T	C	-	SOX2_HMG_3	25	0	+	0	0	.
chr6	161656398	161656399	chr6:161656399:C:T	rs12206076	C	T	C	SOX2_HMG_3	-8	0	-	0	0	.
chr6	161832667	161832668	chr6:161832668:G:A	rs11962503	G	A	G	SOX2_HMG_3	23	0	+	0	0	.
chr6	161856351	161856352	chr6:161856352:T:C	rs6931778	T	C	C	SOX2_HMG_3	17	0	+	0	0	.
chr6	161889463	161889464	chr6:161889464:A:G	rs9355950	A	G	A	SOX2_HMG_3	6	1	-	2.8396730936320376	-4.069081685683182	GGGCAATGCCTTTGAGA
chr6	162268260	162268261	chr6:162268261:G:T	rs778527011	G	T	G	SOX2_HMG_3	28	0	+	0	0	.
chr6	162326768	162326769	chr6:162326769:C:T	rs7776148	C	T	T	SOX2_HMG_3	11	1	-	6.662533577474503	1.3869220484621039	AATCTATGCTAGTGTTA
chr6	162545950	162545951	chr6:162545951:A:T	rs71567654	A	T	T	SOX2_HMG_3	1	1	+	5.316276940770736	2.310233088247422	TATCAATAGAATTTAAG
chr6	162750763	162750764	chr6:162750764:T:G	rs4568424	T	G	G	SOX2_HMG_3	29	0	+	0	0	.
chr6	162852879	162852880	chr6:162852880:G:A	rs76115844	G	A	G	SOX2_HMG_3	-8	0	+	0	0	.
chr6	163185365	163185366	chr6:163185366:G:T	rs2764000	G	T	T	SOX2_HMG_3	-3	0	-	0	0	.
chr6	163233643	163233644	chr6:163233644:A:G	rs12194164	A	G	A	SOX2_HMG_3	-2	0	+	0	0	.
chr6	163326507	163326508	chr6:163326508:T:C	rs2321513	T	C	C	SOX2_HMG_3	4	1	-	8.203546717251236	1.294791937936015	GGCCAATGGCAGTGAGG
chr6	163367968	163367969	chr6:163367969:C:G	chr6:163367969:C:G	C	G	C	SOX2_HMG_3	13	1	-	7.674182899325729	0.7654281200105091	AATGAATGACATTGAGT
chr6	163381348	163381349	chr6:163381349:A:G	rs1764015	A	G	G	SOX2_HMG_3	6	1	-	4.3470369836584535	-2.561717795656767	CATCCATGTCAGTGACC
chr6	163423359	163423360	chr6:163423360:T:C	rs2759386	T	C	C	SOX2_HMG_3	-20	0	-	0	0	.
chr6	163965635	163965636	chr6:163965636:C:G	rs115930247	C	G	C	SOX2_HMG_3	-12	0	-	0	0	.
chr6	163991484	163991485	chr6:163991485:T:C	rs534401008	T	C	T	SOX2_HMG_3	23	0	-	0	0	.
chr6	164131916	164131917	chr6:164131917:T:C	rs58778525	T	C	T	SOX2_HMG_3	-7	0	+	0	0	.
chr6	164208682	164208683	chr6:164208683:G:T	rs1325402	G	T	T	SOX2_HMG_3	-18	0	-	0	0	.
chr6	164211380	164211381	chr6:164211381:G:A	rs807909	G	A	G	SOX2_HMG_3	17	0	-	0	0	.
chr6	164345683	164345684	chr6:164345684:A:G	rs6930276	A	G	A	SOX2_HMG_3	30	0	-	0	0	.
chr6	164698301	164698302	chr6:164698302:C:T	rs916921786	C	T	c	SOX2_HMG_3	-7	0	+	0	0	.
chr6	164709922	164709923	chr6:164709923:A:G	rs10946017	A	G	G	SOX2_HMG_3	14	1	-	1.8033949191466232	-2.3161299416057757	CCTCACTGTCAGTGTGG
chr6	164892120	164892121	chr6:164892121:C:T	rs11752832	C	T	C	SOX2_HMG_3	27	0	-	0	0	.
chr6	164908922	164908923	chr6:164908923:T:C	rs1285086031	T	C	T	SOX2_HMG_3	23	0	+	0	0	.
chr6	164927650	164927651	chr6:164927651:A:G	rs6455971	A	G	G	SOX2_HMG_3	-9	0	+	0	0	.
chr6	164927679	164927680	chr6:164927680:T:G	rs6455972	T	G	G	SOX2_HMG_3	20	0	+	0	0	.
chr6	164927682	164927683	chr6:164927683:A:G	chr6:164927683:A:G	A	G	A	SOX2_HMG_3	23	0	+	0	0	.
chr6	164927682	164927683	chr6:164927683:A:T	rs36113322	A	T	A	SOX2_HMG_3	23	0	+	0	0	.
chr6	165129944	165129945	chr6:165129945:T:C	rs17569276	T	C	T	SOX2_HMG_3	35	0	-	0	0	.
chr6	165178508	165178509	chr6:165178509:C:T	rs9459321	C	T	C	SOX2_HMG_3	33	0	-	0	0	.
chr6	165178513	165178514	chr6:165178514:A:G	rs1964430	A	G	G	SOX2_HMG_3	28	0	-	0	0	.
chr6	165206918	165206919	chr6:165206919:G:C	rs1029386879	G	C	G	SOX2_HMG_3	17	0	+	0	0	.
chr6	165544079	165544080	chr6:165544080:T:G	rs73786630	T	G	T	SOX2_HMG_3	2	1	+	4.670776332631348	0.8031614979533073	GGTCAAAGCAAGTGAAA
chr6	165625086	165625087	chr6:165625087:T:C	rs56228667	T	C	C	SOX2_HMG_3	-19	0	-	0	0	.
chr6	165890321	165890322	chr6:165890322:C:A	rs11754381	C	A	C	SOX2_HMG_3	24	0	-	0	0	.
chr6	165890347	165890348	chr6:165890348:T:C	rs9365935	T	C	T	SOX2_HMG_3	-2	0	-	0	0	.
chr6	165922234	165922235	chr6:165922235:G:A	rs75340726	G	A	A	SOX2_HMG_3	-1	0	-	0	0	.
chr6	166445683	166445684	chr6:166445684:G:A	rs112268659	G	A	G	SOX2_HMG_3	35	0	-	0	0	.
chr6	166776472	166776473	chr6:166776473:T:C	rs9459745	T	C	T	SOX2_HMG_3	-10	0	-	0	0	.
chr6	166779122	166779123	chr6:166779123:T:C	rs7766940	T	C	T	SOX2_HMG_3	-15	0	-	0	0	.
chr6	166976753	166976754	chr6:166976754:A:G	rs444210	A	G	G	SOX2_HMG_3	-4	0	-	0	0	.
chr6	167005982	167005983	chr6:167005983:G:C	rs11965188	G	C	G	SOX2_HMG_3	-10	0	-	0	0	.
chr6	167218717	167218718	chr6:167218718:A:T	rs9364899	A	T	A	SOX2_HMG_3	5	1	+	6.114902482559519	-0.7938522967557007	TATCAATTTTCTTGACA
chr6	167234556	167234557	chr6:167234557:T:C	rs6456165	T	C	T	SOX2_HMG_3	-6	0	-	0	0	.
chr6	167284607	167284608	chr6:167284608:C:T	rs9459960	C	T	t	SOX2_HMG_3	36	0	-	0	0	.
chr6	167284618	167284619	chr6:167284619:A:C	rs9457295	A	C	a	SOX2_HMG_3	25	0	-	0	0	.
chr6	167704860	167704861	chr6:167704861:C:A	rs145037242	C	A	C	SOX2_HMG_3	19	0	-	0	0	.
chr6	167730688	167730689	chr6:167730689:C:A	rs549219035	C	A	C	SOX2_HMG_3	3	1	+	2.1193644202541213	-4.789390359061098	GAGCAAAGTCAGTGTAG
chr6	167735673	167735674	chr6:167735674:A:G	rs9456161	A	G	G	SOX2_HMG_3	19	0	-	0	0	.
chr6	167744325	167744326	chr6:167744326:C:A	rs536677	C	A	C	SOX2_HMG_3	0	1	+	3.2696815218769077	3.794154144502937	CATCCCTGTTATTGAAG
chr6	167777385	167777386	chr6:167777386:A:C	rs151314912	A	C	A	SOX2_HMG_3	32	0	+	0	0	.
chr6	168063145	168063146	chr6:168063146:C:T	rs902394	C	T	T	SOX2_HMG_3	31	0	+	0	0	.
chr6	168199239	168199240	chr6:168199240:C:A	rs1842213	C	A	a	SOX2_HMG_3	-14	0	-	0	0	.
chr6	168214945	168214946	chr6:168214946:C:T	rs73790409	C	T	C	SOX2_HMG_3	28	0	-	0	0	.
chr6	168227185	168227186	chr6:168227186:A:G	rs77504626	A	G	A	SOX2_HMG_3	26	0	-	0	0	.
chr6	168390751	168390752	chr6:168390752:T:G	rs4524581	T	G	G	SOX2_HMG_3	-7	0	-	0	0	.
chr6	168687342	168687343	chr6:168687343:G:A	rs613728	G	A	G	SOX2_HMG_3	30	0	-	0	0	.
chr6	168708783	168708784	chr6:168708784:T:C	rs686357	T	C	T	SOX2_HMG_3	21	0	+	0	0	.
chr6	168711725	168711726	chr6:168711726:C:A	rs599295	C	A	C	SOX2_HMG_3	-9	0	+	0	0	.
chr6	168711732	168711733	chr6:168711733:C:T	rs612157	C	T	C	SOX2_HMG_3	-2	0	+	0	0	.
chr6	168742344	168742345	chr6:168742345:G:C	rs183791724	G	C	G	SOX2_HMG_3	29	0	+	0	0	.
chr6	168826850	168826851	chr6:168826851:A:C	rs9969068	A	C	A	SOX2_HMG_3	28	0	-	0	0	.
chr6	168826885	168826886	chr6:168826886:A:G	rs73246787	A	G	A	SOX2_HMG_3	-7	0	-	0	0	.
chr6	168916888	168916889	chr6:168916889:G:C	rs10945345	G	C	G	SOX2_HMG_3	-12	0	-	0	0	.
chr6	168965440	168965441	chr6:168965441:C:T	rs4708398	C	T	C	SOX2_HMG_3	31	0	+	0	0	.
chr6	169159081	169159082	chr6:169159082:A:G	rs1395249420	A	G	A	SOX2_HMG_3	10	1	+	4.656011893444477	-2.2527428858707443	CATTAATTTTATTGTTC
chr6	169376424	169376425	chr6:169376425:T:C	rs4716370	T	C	C	SOX2_HMG_3	10	1	-	7.124052838160968	0.21529805884574732	AGTCAAGGGCATTGAAT
chr6	169539677	169539678	chr6:169539678:G:A	rs80114444	G	A	G	SOX2_HMG_3	35	0	+	0	0	.
chr6	169722957	169722958	chr6:169722958:T:C	rs185351411	T	C	T	SOX2_HMG_3	5	1	-	2.5227883188451705	-4.38596646047005	CGTCAATGGAAGTAACT
chr6	169881703	169881704	chr6:169881704:G:A	rs925920792	G	A	g	SOX2_HMG_3	1	1	-	2.358970097726408	2.358970097726408	GCTCAATGGCATGGGGG
chr6	169921271	169921272	chr6:169921272:G:A	rs909538100	G	A	-	SOX2_HMG_3	1	1	+	4.104076352240772	5.935723942320063	CGTCAGTGGCAGTGACA
chr6	169921300	169921301	chr6:169921301:C:T	rs1041568390	C	T	c	SOX2_HMG_3	30	0	+	0	0	.
chr6	169923433	169923434	chr6:169923434:C:T	rs879088426	C	T	c	SOX2_HMG_3	8	1	-	4.926744386834317	4.077700439470688	TGTCAATGGTATTCTGG
chr6	169923694	169923695	chr6:169923695:C:T	rs927718523	C	T	c	SOX2_HMG_3	26	0	-	0	0	.
chr6	169923834	169923835	chr6:169923835:C:G	rs1190180289	C	G	c	SOX2_HMG_3	7	1	-	3.1731554986546144	-3.5596867127813607	TGACAAAGATAGTGATG
chr6	170076933	170076934	chr6:170076934:G:A	rs148476726	G	A	G	SOX2_HMG_3	-8	0	+	0	0	.
chr6	170138126	170138127	chr6:170138127:T:C	rs3013267	T	C	T	SOX2_HMG_3	14	1	-	4.006244108001725	-0.17563350929939442	CCCCAATTTCAGTGAAT
chr6	170271596	170271597	chr6:170271597:C:T	rs181276894	C	T	C	SOX2_HMG_3	12	1	-	3.0742100619473782	3.0742100619473782	GATCAATGGTGTGGAAT
chr6	170306066	170306067	chr6:170306067:T:C	rs9356634	T	C	C	SOX2_HMG_3	-20	0	-	0	0	.
chr6	170369405	170369406	chr6:170369406:G:C	rs6456202	G	C	G	SOX2_HMG_3	-4	0	-	0	0	.
chr6	170408332	170408333	chr6:170408333:A:G	rs926221	A	G	T	SOX2_HMG_3	33	0	+	0	0	.
chr7	506876	506877	chr7:506877:A:C	rs4074396	A	C	A	SOX2_HMG_3	-8	0	-	0	0	.
chr7	625445	625446	chr7:625446:A:G	rs150687728	A	G	A	SOX2_HMG_3	30	0	+	0	0	.
chr7	666984	666985	chr7:666985:A:C	rs897967352	A	C	T	SOX2_HMG_3	-9	0	+	0	0	.
chr7	920812	920813	chr7:920813:C:T	rs3808343	C	T	C	SOX2_HMG_3	-5	0	-	0	0	.
chr7	1000890	1000891	chr7:1000891:G:A	rs112650357	G	A	G	SOX2_HMG_3	-9	0	+	0	0	.
chr7	1029584	1029585	chr7:1029585:T:C	rs144274703	T	C	T	SOX2_HMG_3	14	1	+	3.733702776888178	-0.3858220838642217	GATCAATTTTATGGTGC
chr7	1112249	1112250	chr7:1112250:G:T	rs10270249	G	T	G	SOX2_HMG_3	11	1	+	4.24137186604759	5.65845183526754	TCTCCATGGCAGTGAGG
chr7	1136759	1136760	chr7:1136760:A:C	rs116220010	A	C	a	SOX2_HMG_3	2	1	-	4.3091124986641	0.4414976639860599	GATCAGGGGTATTGATT
chr7	1742906	1742907	chr7:1742907:G:A	rs138962782	G	A	G	SOX2_HMG_3	1	1	+	10.029318650319455	11.860966240398747	CGTCAATATCAGTGAAA
chr7	1983083	1983084	chr7:1983084:G:A	rs118013978	G	A	G	SOX2_HMG_3	-10	0	-	0	0	.
chr7	2037574	2037575	chr7:2037575:T:C	rs73281376	T	C	T	SOX2_HMG_3	5	1	-	4.271984156458203	-2.636770622857018	AATCAATGACAGTAGTA
chr7	2039345	2039346	chr7:2039346:C:T	rs56226325	C	T	C	SOX2_HMG_3	31	0	-	0	0	.
chr7	2069450	2069451	chr7:2069451:G:A	rs570697675	G	A	G	SOX2_HMG_3	25	0	-	0	0	.
chr7	2110199	2110200	chr7:2110200:C:T	rs73038485	C	T	T	SOX2_HMG_3	23	0	-	0	0	.
chr7	2468436	2468437	chr7:2468437:T:C	rs2906166	T	C	C	SOX2_HMG_3	24	0	-	0	0	.
chr7	2512090	2512091	chr7:2512091:G:A	rs80006756	G	A	G	SOX2_HMG_3	34	0	-	0	0	.
chr7	2682916	2682917	chr7:2682917:A:G	rs57014361	A	G	A	SOX2_HMG_3	-8	0	-	0	0	.
chr7	2739251	2739252	chr7:2739252:G:A	rs116728629	G	A	G	SOX2_HMG_3	-20	0	-	0	0	.
chr7	2760434	2760435	chr7:2760435:C:T	rs17132655	C	T	C	SOX2_HMG_3	22	0	+	0	0	.
chr7	3007216	3007217	chr7:3007217:T:C	rs1968923	T	C	C	SOX2_HMG_3	-3	0	+	0	0	.
chr7	3007232	3007233	chr7:3007233:G:A	rs74555857	G	A	G	SOX2_HMG_3	13	1	+	2.7040329915002	-4.2047217878150205	TTTCCATGCCAGTGAGT
chr7	3199547	3199548	chr7:3199548:G:C	rs7797535	G	C	G	SOX2_HMG_3	-1	0	+	0	0	.
chr7	3199549	3199550	chr7:3199550:G:A	rs10228184	G	A	G	SOX2_HMG_3	1	1	+	3.0527073056020626	4.884354895681353	AGTGAATGCTATTGGTC
chr7	3222135	3222136	chr7:3222136:C:A	rs7789178	C	A	A	SOX2_HMG_3	-1	0	-	0	0	.
chr7	3244505	3244506	chr7:3244506:T:C	rs10452788	T	C	C	SOX2_HMG_3	-13	0	+	0	0	.
chr7	3673111	3673112	chr7:3673112:C:T	rs55906803	C	T	c	SOX2_HMG_3	-5	0	+	0	0	.
chr7	3851656	3851657	chr7:3851657:G:T	rs12532912	G	T	G	SOX2_HMG_3	-1	0	-	0	0	.
chr7	3980408	3980409	chr7:3980409:T:C	rs186628316	T	C	T	SOX2_HMG_3	5	1	-	3.6427651371940697	-3.26598964212115	GAACAATGGAAGCGAAG
chr7	3980427	3980428	chr7:3980428:C:G	rs114129214	C	G	C	SOX2_HMG_3	-14	0	-	0	0	.
chr7	3993928	3993929	chr7:3993929:A:G	rs1025915	A	G	A	SOX2_HMG_3	5	1	+	5.198617678304432	-1.7101371010107886	AAGCAATGCTCTTGATC
chr7	4023094	4023095	chr7:4023095:A:G	rs10228937	A	G	G	SOX2_HMG_3	6	1	-	3.3279303938370957	-3.5808243854781248	CATAAATGGGATTGAAA
chr7	4070417	4070418	chr7:4070418:G:C	rs10248826	G	C	C	SOX2_HMG_3	36	0	-	0	0	.
chr7	4132181	4132182	chr7:4132182:A:G	rs35849025	A	G	A	SOX2_HMG_3	-20	0	-	0	0	.
chr7	5355090	5355091	chr7:5355091:T:G	rs61056534	T	G	T	SOX2_HMG_3	-1	0	-	0	0	.
chr7	5596644	5596645	chr7:5596645:T:A	rs117689248	T	A	T	SOX2_HMG_3	-4	0	+	0	0	.
chr7	6020986	6020987	chr7:6020987:A:C	rs2345055	A	C	A	SOX2_HMG_3	-13	0	+	0	0	.
chr7	6378643	6378644	chr7:6378644:T:C	rs7784465	T	C	T	SOX2_HMG_3	31	0	+	0	0	.
chr7	6506387	6506388	chr7:6506388:G:A	rs75926488	G	A	G	SOX2_HMG_3	21	0	+	0	0	.
chr7	6618923	6618924	chr7:6618924:A:G	rs2248342	A	G	g	SOX2_HMG_3	4	1	+	3.4292429335308845	-3.479511845784335	AGCCAATGTCAGTGTCT
chr7	6659273	6659274	chr7:6659274:C:A	rs872424	C	A	C	SOX2_HMG_3	17	0	-	0	0	.
chr7	6950698	6950699	chr7:6950699:A:G	rs4318979	A	G	.	SOX2_HMG_3	-16	0	+	0	0	.
chr7	7229162	7229163	chr7:7229163:A:G	rs12539501	A	G	A	SOX2_HMG_3	34	0	+	0	0	.
chr7	7321852	7321853	chr7:7321853:A:G	rs17506507	A	G	A	SOX2_HMG_3	11	1	+	4.141138977195885	9.416750506208283	TGTCAATGTCAATGTTC
chr7	7386274	7386275	chr7:7386275:G:C	rs1294635	G	C	G	SOX2_HMG_3	-20	0	+	0	0	.
chr7	7424048	7424049	chr7:7424049:A:G	rs115692596	A	G	A	SOX2_HMG_3	-18	0	-	0	0	.
chr7	7499548	7499549	chr7:7499549:T:G	rs185619711	T	G	T	SOX2_HMG_3	19	0	-	0	0	.
chr7	7565014	7565015	chr7:7565015:C:T	rs115300490	C	T	C	SOX2_HMG_3	-11	0	+	0	0	.
chr7	7565024	7565025	chr7:7565025:G:A	rs972600	G	A	A	SOX2_HMG_3	-1	0	+	0	0	.
chr7	7682014	7682015	chr7:7682015:A:C	rs62432580	A	C	A	SOX2_HMG_3	12	1	-	7.073866661131479	0.16511188181625935	CAACAATATTAGTGAAC
chr7	7817221	7817222	chr7:7817222:C:G	rs6957893	C	G	C	SOX2_HMG_3	8	1	-	6.752727017493134	6.018458584721934	ACTAAATGGCATTGAAG
chr7	7853185	7853186	chr7:7853186:A:G	rs6971178	A	G	A	SOX2_HMG_3	-2	0	-	0	0	.
chr7	8149240	8149241	chr7:8149241:C:A	rs4720765	C	A	C	SOX2_HMG_3	34	0	-	0	0	.
chr7	8186259	8186260	chr7:8186260:G:A	rs10271463	G	A	A	SOX2_HMG_3	-19	0	+	0	0	.
chr7	8509846	8509847	chr7:8509847:C:T	rs2057865	C	T	T	SOX2_HMG_3	33	0	+	0	0	.
chr7	8590849	8590850	chr7:8590850:C:G	rs10257762	C	G	C	SOX2_HMG_3	30	0	+	0	0	.
chr7	8885746	8885747	chr7:8885747:A:G	rs990589	A	G	G	SOX2_HMG_3	15	1	-	4.755368964829388	1.9126598086525295	AATCACTGTTATTTATA
chr7	8976421	8976422	chr7:8976422:C:T	rs4725152	C	T	T	SOX2_HMG_3	17	0	-	0	0	.
chr7	9202218	9202219	chr7:9202219:A:G	rs1285466	A	G	A	SOX2_HMG_3	-10	0	+	0	0	.
chr7	9822580	9822581	chr7:9822581:A:T	rs563520754	A	T	A	SOX2_HMG_3	31	0	-	0	0	.
chr7	9822592	9822593	chr7:9822593:G:T	rs140577487	G	T	G	SOX2_HMG_3	19	0	-	0	0	.
chr7	10129021	10129022	chr7:10129022:A:C	rs17162680	A	C	A	SOX2_HMG_3	18	0	-	0	0	.
chr7	10142737	10142738	chr7:10142738:T:C	rs2215607	T	C	T	SOX2_HMG_3	-9	0	+	0	0	.
chr7	10241560	10241561	chr7:10241561:C:G	rs73269571	C	G	C	SOX2_HMG_3	2	1	-	5.299753671485895	4.1639964358483486	AAGCAATTGAAGTGTAA
chr7	10300365	10300366	chr7:10300366:C:T	rs76219292	C	T	C	SOX2_HMG_3	27	0	-	0	0	.
chr7	10308595	10308596	chr7:10308596:T:G	rs13244651	T	G	T	SOX2_HMG_3	27	0	-	0	0	.
chr7	10331138	10331139	chr7:10331139:A:G	rs115527305	A	G	A	SOX2_HMG_3	1	1	+	6.7073095300959205	4.875661940016631	GATCAAGGGAAGTGAAT
chr7	10343126	10343127	chr7:10343127:T:C	rs13236213	T	C	T	SOX2_HMG_3	5	1	-	7.602570248187361	0.6938154688721412	GATCAATGATATTGCCT
chr7	10819420	10819421	chr7:10819421:T:C	rs142124911	T	C	T	SOX2_HMG_3	22	0	-	0	0	.
chr7	10940870	10940871	chr7:10940871:A:G	rs1681288	A	G	A	SOX2_HMG_3	5	1	+	2.7677417367212427	-4.141013042593977	TTTCAATGGTCGTGTAG
chr7	11182793	11182794	chr7:11182794:A:G	rs7458410	A	G	A	SOX2_HMG_3	0	1	-	3.5512865844217125	3.688615562470376	TGTCTATAGCAGTGATT
chr7	11288270	11288271	chr7:11288271:A:C	rs17164254	A	C	A	SOX2_HMG_3	6	1	-	4.005104991607196	-2.9036497877080243	TTTCAATTTTAGGGATT
chr7	11319503	11319504	chr7:11319504:T:C	rs10276882	T	C	C	SOX2_HMG_3	9	1	+	5.599061229256328	4.7923910953192825	GTTCAATTTTGTTGAAA
chr7	11469810	11469811	chr7:11469811:A:G	rs56163655	A	G	A	SOX2_HMG_3	-5	0	-	0	0	.
chr7	11557759	11557760	chr7:11557760:T:C	rs10229585	T	C	T	SOX2_HMG_3	17	0	-	0	0	.
chr7	11702577	11702578	chr7:11702578:G:A	rs10257747	G	A	A	SOX2_HMG_3	-6	0	+	0	0	.
chr7	11934751	11934752	chr7:11934752:G:A	rs4400275	G	A	A	SOX2_HMG_3	-18	0	+	0	0	.
chr7	11986351	11986352	chr7:11986352:T:C	rs75303544	T	C	T	SOX2_HMG_3	9	1	+	6.45891900204654	5.652248868109493	CATCAATTCTATAGAAT
chr7	12064773	12064774	chr7:12064774:T:C	rs75627357	T	C	T	SOX2_HMG_3	5	1	-	2.948764547259921	-3.9599902320552993	GCACAATGTTAGTGGCT
chr7	12107674	12107675	chr7:12107675:T:C	rs58246395	T	C	T	SOX2_HMG_3	24	0	+	0	0	.
chr7	12231825	12231826	chr7:12231826:A:G	rs3800842	A	G	G	SOX2_HMG_3	6	1	-	3.1271651964225384	-3.7815895828926824	AAATAATGTAAGTGAGG
chr7	12295030	12295031	chr7:12295031:T:A	rs4721078	T	A	T	SOX2_HMG_3	14	1	-	3.1518348020554376	0.4390609572411434	AATCTATTCCAGTGACT
chr7	12351334	12351335	chr7:12351335:C:G	rs17671056	C	G	C	SOX2_HMG_3	20	0	-	0	0	.
chr7	12433517	12433518	chr7:12433518:T:G	rs847983	T	G	G	SOX2_HMG_3	27	0	-	0	0	.
chr7	12567220	12567221	chr7:12567221:C:G	rs1859989	C	G	G	SOX2_HMG_3	25	0	-	0	0	.
chr7	12567225	12567226	chr7:12567226:A:G	rs1859990	A	G	G	SOX2_HMG_3	20	0	-	0	0	.
chr7	12583994	12583995	chr7:12583995:A:G	rs17355921	A	G	A	SOX2_HMG_3	28	0	+	0	0	.
chr7	12588272	12588273	chr7:12588273:G:A	rs76515721	G	A	G	SOX2_HMG_3	35	0	+	0	0	.
chr7	12718526	12718527	chr7:12718527:G:A	rs4719328	G	A	A	SOX2_HMG_3	17	0	-	0	0	.
chr7	12775694	12775695	chr7:12775695:C:T	rs10262101	C	T	T	SOX2_HMG_3	-14	0	-	0	0	.
chr7	12859914	12859915	chr7:12859915:C:G	rs764903	C	G	C	SOX2_HMG_3	7	1	-	3.4962130356269103	-3.236629175809064	TAACCATGATAGTGAAA
chr7	12926350	12926351	chr7:12926351:A:G	rs34075	A	G	A	SOX2_HMG_3	10	1	+	2.8500160907012284	-4.058738688613991	AATTAAGGGCATTGAAG
chr7	12930033	12930034	chr7:12930034:T:G	rs116906555	T	G	T	SOX2_HMG_3	24	0	-	0	0	.
chr7	12984758	12984759	chr7:12984759:C:G	rs60146115	C	G	C	SOX2_HMG_3	36	0	-	0	0	.
chr7	13028300	13028301	chr7:13028301:T:A	rs148889282	T	A	T	SOX2_HMG_3	34	0	+	0	0	.
chr7	13601582	13601583	chr7:13601583:G:C	rs10256816	G	C	G	SOX2_HMG_3	24	0	-	0	0	.
chr7	13904965	13904966	chr7:13904966:G:A	rs73681259	G	A	G	SOX2_HMG_3	26	0	-	0	0	.
chr7	13990782	13990783	chr7:13990783:G:A	rs571298682	G	A	G	SOX2_HMG_3	-3	0	+	0	0	.
chr7	14447032	14447033	chr7:14447033:A:G	rs10950526	A	G	A	SOX2_HMG_3	-14	0	+	0	0	.
chr7	14447047	14447048	chr7:14447048:A:G	rs6943928	A	G	A	SOX2_HMG_3	1	1	+	3.792876223830788	1.9612286337514975	TATCATTATCATTGTAG
chr7	14691169	14691170	chr7:14691170:T:G	rs12699655	T	G	t	SOX2_HMG_3	27	0	+	0	0	.
chr7	14717979	14717980	chr7:14717980:C:T	rs189352869	C	T	C	SOX2_HMG_3	-20	0	+	0	0	.
chr7	14960672	14960673	chr7:14960673:A:T	rs36909	A	T	A	SOX2_HMG_3	10	1	+	6.555958917755483	-0.35279586155973786	TGACAATGAAAGTGAGG
chr7	14960679	14960680	chr7:14960680:G:A	rs36910	G	A	A	SOX2_HMG_3	17	0	+	0	0	.
chr7	15084582	15084583	chr7:15084583:A:G	rs17379758	A	G	A	SOX2_HMG_3	16	1	+	6.300898703530331	6.574586319920602	CATCAATGGAATTTACA
chr7	15086904	15086905	chr7:15086905:T:G	rs142218207	T	G	T	SOX2_HMG_3	10	1	-	3.5065454406684617	-3.4022093386467587	GAAGAATGTAAGTGAAA
chr7	15461583	15461584	chr7:15461584:A:G	rs77479662	A	G	A	SOX2_HMG_3	9	1	-	2.652914154094068	1.846244020157022	GATAAATGCTAATGAGA
chr7	15601384	15601385	chr7:15601385:G:A	rs966470	G	A	A	SOX2_HMG_3	-3	0	+	0	0	.
chr7	15601416	15601417	chr7:15601417:T:C	rs17168881	T	C	T	SOX2_HMG_3	29	0	+	0	0	.
chr7	15612275	15612276	chr7:15612276:A:T	rs2237492	A	T	A	SOX2_HMG_3	28	0	-	0	0	.
chr7	15694048	15694049	chr7:15694049:T:C	rs4721453	T	C	T	SOX2_HMG_3	22	0	+	0	0	.
chr7	15888549	15888550	chr7:15888550:G:T	rs9655121	G	T	A	SOX2_HMG_3	29	0	-	0	0	.
chr7	15924612	15924613	chr7:15924613:A:C	rs12699758	A	C	C	SOX2_HMG_3	24	0	-	0	0	.
chr7	16039569	16039570	chr7:16039570:A:T	rs4721467	A	T	T	SOX2_HMG_3	30	0	-	0	0	.
chr7	16123148	16123149	chr7:16123149:G:A	rs17359183	G	A	G	SOX2_HMG_3	23	0	-	0	0	.
chr7	16269461	16269462	chr7:16269462:A:G	chr7:16269462:A:G	A	G	A	SOX2_HMG_3	10	1	+	5.27867208134717	-1.6300826979680514	CAGCAATAACATTGTGA
chr7	16277029	16277030	chr7:16277030:G:C	rs1295129	G	C	C	SOX2_HMG_3	8	1	+	4.65492317545462	3.9206547426834186	GTTCAAATGCATTGAAA
chr7	16404917	16404918	chr7:16404918:C:A	rs186009387	C	A	C	SOX2_HMG_3	0	1	-	3.877280503723568	2.9948846239635807	GATAAATGGTATTTAAG
chr7	16554937	16554938	chr7:16554938:G:C	rs116540265	G	C	G	SOX2_HMG_3	19	0	-	0	0	.
chr7	16607106	16607107	chr7:16607107:G:A	rs7788389	G	A	G	SOX2_HMG_3	18	0	+	0	0	.
chr7	16619800	16619801	chr7:16619801:C:G	rs2286229	C	G	C	SOX2_HMG_3	-13	0	-	0	0	.
chr7	16679038	16679039	chr7:16679039:G:A	chr7:16679039:G:A	G	A	G	SOX2_HMG_3	9	1	-	9.791282263932015	10.59795239786906	TATCAATGACAGTGTGT
chr7	16702605	16702606	chr7:16702606:T:C	rs78383859	T	C	T	SOX2_HMG_3	-19	0	-	0	0	.
chr7	16734981	16734982	chr7:16734982:T:A	rs13245100	T	A	T	SOX2_HMG_3	31	0	+	0	0	.
chr7	16741306	16741307	chr7:16741307:A:G	rs864211	A	G	A	SOX2_HMG_3	-11	0	+	0	0	.
chr7	16850301	16850302	chr7:16850302:T:C	rs1525738	T	C	T	SOX2_HMG_3	12	1	+	3.2814181560987055	-3.627336623216515	TCTCAATGTCCTTGGTG
chr7	16882741	16882742	chr7:16882742:A:G	rs10950638	A	G	A	SOX2_HMG_3	-18	0	+	0	0	.
chr7	16939335	16939336	chr7:16939336:T:G	rs1405499956	T	G	T	SOX2_HMG_3	-2	0	+	0	0	.
chr7	17020681	17020682	chr7:17020682:C:T	rs10242584	C	T	C	SOX2_HMG_3	20	0	+	0	0	.
chr7	17023188	17023189	chr7:17023189:T:C	rs60550274	T	C	T	SOX2_HMG_3	19	0	-	0	0	.
chr7	17038583	17038584	chr7:17038584:T:A	rs17279471	T	A	T	SOX2_HMG_3	2	1	+	2.6152450848150743	-1.252369749862967	TATCAGTGAGATTGAAG
chr7	17063411	17063412	chr7:17063412:G:C	rs17346347	G	C	G	SOX2_HMG_3	27	0	-	0	0	.
chr7	17096059	17096060	chr7:17096060:A:G	rs1471151243	A	G	A	SOX2_HMG_3	28	0	+	0	0	.
chr7	17279942	17279943	chr7:17279943:G:C	rs193117046	G	C	G	SOX2_HMG_3	25	0	-	0	0	.
chr7	17368125	17368126	chr7:17368126:T:G	rs74542680	T	G	T	SOX2_HMG_3	-9	0	+	0	0	.
chr7	17546530	17546531	chr7:17546531:T:C	rs117292840	T	C	T	SOX2_HMG_3	-8	0	+	0	0	.
chr7	18296196	18296197	chr7:18296197:T:G	rs1007662982	T	G	T	SOX2_HMG_3	-15	0	-	0	0	.
chr7	18337639	18337640	chr7:18337640:C:T	rs17347060	C	T	C	SOX2_HMG_3	33	0	-	0	0	.
chr7	18698695	18698696	chr7:18698696:C:T	rs1182736	C	T	C	SOX2_HMG_3	-13	0	+	0	0	.
chr7	18866884	18866885	chr7:18866885:A:C	rs146650699	A	C	A	SOX2_HMG_3	4	1	+	5.275883425496103	-1.6328713538191169	ACTCAATGTCAGTGCAA
chr7	19554540	19554541	chr7:19554541:G:A	rs2192477	G	A	G	SOX2_HMG_3	-10	0	+	0	0	.
chr7	19961651	19961652	chr7:19961652:G:T	rs13221825	G	T	T	SOX2_HMG_3	33	0	-	0	0	.
chr7	20241501	20241502	chr7:20241502:C:A	rs117757442	C	A	C	SOX2_HMG_3	-10	0	+	0	0	.
chr7	20267391	20267392	chr7:20267392:G:T	rs6975579	G	T	T	SOX2_HMG_3	29	0	-	0	0	.
chr7	20267437	20267438	chr7:20267438:G:A	rs6975721	G	A	G	SOX2_HMG_3	-17	0	-	0	0	.
chr7	20270893	20270894	chr7:20270894:C:A	rs1385457063	C	A	C	SOX2_HMG_3	7	1	-	2.182595161665504	0.1378846569319674	GTTCAATGGTATTCCTG
chr7	20277124	20277125	chr7:20277125:C:A	rs73264504	C	A	C	SOX2_HMG_3	31	0	+	0	0	.
chr7	20291368	20291369	chr7:20291369:G:C	rs76401609	G	C	G	SOX2_HMG_3	0	1	+	8.267279518195556	7.522212616484234	GATCAATGTCAGAGAGG
chr7	20649441	20649442	chr7:20649442:A:C	rs6955287	A	C	C	SOX2_HMG_3	11	1	-	3.774182022205894	2.3571020529859448	CTGCAATGTGATTGAAG
chr7	20987986	20987987	chr7:20987987:T:C	rs10245794	T	C	C	SOX2_HMG_3	28	0	+	0	0	.
chr7	21307852	21307853	chr7:21307853:T:C	rs1613562	T	C	C	SOX2_HMG_3	17	0	-	0	0	.
chr7	21359155	21359156	chr7:21359156:A:G	rs7793253	A	G	A	SOX2_HMG_3	4	1	+	2.9487998505952744	-3.959954928719946	CTTCAATGTCAGGGAAC
chr7	21672241	21672242	chr7:21672242:C:T	rs10950869	C	T	T	SOX2_HMG_3	9	1	+	6.257893300677205	7.06456343461425	TAGCAATTACATTGTAA
chr7	21765583	21765584	chr7:21765584:A:G	rs72657373	A	G	A	SOX2_HMG_3	10	1	+	3.271020010140278	-3.637734769174942	AACCAAGGGAATTGAGG
chr7	21765596	21765597	chr7:21765597:G:A	rs72657374	G	A	G	SOX2_HMG_3	23	0	+	0	0	.
chr7	21765608	21765609	chr7:21765609:G:A	rs60554135	G	A	G	SOX2_HMG_3	35	0	+	0	0	.
chr7	21904103	21904104	chr7:21904104:T:C	rs35898649	T	C	T	SOX2_HMG_3	-18	0	-	0	0	.
chr7	22041010	22041011	chr7:22041011:G:T	rs1476692	G	T	G	SOX2_HMG_3	-10	0	+	0	0	.
chr7	22056816	22056817	chr7:22056817:G:A	rs10260357	G	A	G	SOX2_HMG_3	11	1	+	1.6923894239368462	-3.5832221050755515	AATCACTGGAAGTGCTG
chr7	22115757	22115758	chr7:22115758:G:T	rs17146234	G	T	T	SOX2_HMG_3	-15	0	-	0	0	.
chr7	22124945	22124946	chr7:22124946:T:C	rs56337702	T	C	T	SOX2_HMG_3	32	0	-	0	0	.
chr7	22126403	22126404	chr7:22126404:C:T	rs1419755	C	T	T	SOX2_HMG_3	11	1	-	8.127819939593614	2.852208410581216	CAGCAATGACAGTGACA
chr7	22654008	22654009	chr7:22654009:A:G	rs17147081	A	G	A	SOX2_HMG_3	-20	0	-	0	0	.
chr7	22662724	22662725	chr7:22662725:C:G	rs2961296	C	G	G	SOX2_HMG_3	-8	0	-	0	0	.
chr7	23022606	23022607	chr7:23022607:C:T	rs148850755	C	T	C	SOX2_HMG_3	31	0	-	0	0	.
chr7	23022650	23022651	chr7:23022651:C:T	rs1441229413	C	T	c	SOX2_HMG_3	-13	0	-	0	0	.
chr7	23022651	23022652	chr7:23022652:G:A	rs77520274	G	A	G	SOX2_HMG_3	-14	0	-	0	0	.
chr7	23078430	23078431	chr7:23078431:T:A	rs6957013	T	A	A	SOX2_HMG_3	17	0	-	0	0	.
chr7	23411868	23411869	chr7:23411869:C:T	rs189221807	C	T	C	SOX2_HMG_3	-18	0	+	0	0	.
chr7	23514993	23514994	chr7:23514994:A:G	rs1542608	A	G	A	SOX2_HMG_3	23	0	-	0	0	.
chr7	24036189	24036190	chr7:24036190:C:T	rs2042500	C	T	T	SOX2_HMG_3	-7	0	+	0	0	.
chr7	24214060	24214061	chr7:24214061:A:G	rs2172676	A	G	A	SOX2_HMG_3	26	0	+	0	0	.
chr7	24318580	24318581	chr7:24318581:G:A	rs6461791	G	A	G	SOX2_HMG_3	3	1	-	2.8303902905926286	-4.078364488722591	GAGCAATGACTTTGAGC
chr7	24576031	24576032	chr7:24576032:A:C	rs78797842	A	C	A	SOX2_HMG_3	28	0	+	0	0	.
chr7	24899175	24899176	chr7:24899176:C:G	rs117427275	C	G	C	SOX2_HMG_3	28	0	-	0	0	.
chr7	24966042	24966043	chr7:24966043:C:G	rs113952582	C	G	C	SOX2_HMG_3	-18	0	-	0	0	.
chr7	24971831	24971832	chr7:24971832:T:C	rs537108862	T	C	T	SOX2_HMG_3	8	1	-	5.063273052523293	5.912316999886921	TATGAATAACAGTGATA
chr7	25176496	25176497	chr7:25176497:T:C	rs12700593	T	C	T	SOX2_HMG_3	17	0	+	0	0	.
chr7	25259984	25259985	chr7:25259985:G:C	rs62451646	G	C	G	SOX2_HMG_3	0	1	+	5.589601765495127	4.844534863783803	GCACAATGTCAGTGTGG
chr7	25325780	25325781	chr7:25325781:A:G	rs10281820	A	G	A	SOX2_HMG_3	-13	0	+	0	0	.
chr7	25522251	25522252	chr7:25522252:C:T	rs6977303	C	T	C	SOX2_HMG_3	16	1	-	5.156242723399023	4.882555107008752	AAACAATTGCAGTGGAG
chr7	25528234	25528235	chr7:25528235:T:C	rs10807828	T	C	C	SOX2_HMG_3	12	1	+	5.017606514047009	-1.891148265268211	AGACAATTGTATTGTAC
chr7	25656928	25656929	chr7:25656929:T:C	rs149224486	T	C	T	SOX2_HMG_3	23	0	+	0	0	.
chr7	25723517	25723518	chr7:25723518:C:A	rs11769488	C	A	A	SOX2_HMG_3	20	0	-	0	0	.
chr7	25896126	25896127	chr7:25896127:C:A	rs73081656	C	A	C	SOX2_HMG_3	22	0	+	0	0	.
chr7	25970612	25970613	chr7:25970613:C:T	rs10267354	C	T	T	SOX2_HMG_3	19	0	+	0	0	.
chr7	25970625	25970626	chr7:25970626:G:C	rs10267565	G	C	G	SOX2_HMG_3	32	0	+	0	0	.
chr7	26348644	26348645	chr7:26348645:G:T	rs10235391	G	T	T	SOX2_HMG_3	15	1	-	1.6203907968745919	3.228197516334728	GGGCAATGGATTTGACG
chr7	26349003	26349004	chr7:26349004:A:G	rs10267867	A	G	G	SOX2_HMG_3	-12	0	+	0	0	.
chr7	26365732	26365733	chr7:26365733:A:G	rs2698716	A	G	G	SOX2_HMG_3	-11	0	-	0	0	.
chr7	26526453	26526454	chr7:26526454:G:A	rs6942911	G	A	G	SOX2_HMG_3	25	0	-	0	0	.
chr7	26574541	26574542	chr7:26574542:A:G	rs529857803	A	G	A	SOX2_HMG_3	-20	0	-	0	0	.
chr7	26991979	26991980	chr7:26991980:C:T	rs118188233	C	T	C	SOX2_HMG_3	36	0	+	0	0	.
chr7	27157981	27157982	chr7:27157982:C:G	rs4722666	C	G	C	SOX2_HMG_3	34	0	-	0	0	.
chr7	27186197	27186198	chr7:27186198:A:C	rs141152665	A	C	A	SOX2_HMG_3	2	1	+	3.6725088130066244	2.5367515773690776	AAACCATGCAATTGAGG
chr7	28203566	28203567	chr7:28203567:T:C	rs10263934	T	C	T	SOX2_HMG_3	11	1	+	7.304148214570543	0.6114567163381956	GTACAATTTCATTGAAT
chr7	28381416	28381417	chr7:28381417:G:T	rs1811248	G	T	T	SOX2_HMG_3	28	0	+	0	0	.
chr7	28493627	28493628	chr7:28493628:G:A	rs28393709	G	A	G	SOX2_HMG_3	30	0	-	0	0	.
chr7	28503614	28503615	chr7:28503615:T:C	rs78755701	T	C	T	SOX2_HMG_3	-14	0	+	0	0	.
chr7	28685918	28685919	chr7:28685919:G:A	rs757980	G	A	A	SOX2_HMG_3	23	0	-	0	0	.
chr7	28761683	28761684	chr7:28761684:A:G	rs4722843	A	G	A	SOX2_HMG_3	33	0	-	0	0	.
chr7	28866225	28866226	chr7:28866226:T:C	rs11763355	T	C	C	SOX2_HMG_3	9	1	+	5.4713888413480385	4.664718707410992	TGTTAATGATATTGTTA
chr7	28866236	28866237	chr7:28866237:G:A	rs73294992	G	A	A	SOX2_HMG_3	20	0	+	0	0	.
chr7	28950056	28950057	chr7:28950057:C:T	rs75395053	C	T	C	SOX2_HMG_3	20	0	+	0	0	.
chr7	29349679	29349680	chr7:29349680:G:A	rs990376	G	A	A	SOX2_HMG_3	-16	0	-	0	0	.
chr7	29469348	29469349	chr7:29469349:A:G	rs79776490	A	G	A	SOX2_HMG_3	-1	0	+	0	0	.
chr7	29649210	29649211	chr7:29649211:T:C	rs1641209	T	C	c	SOX2_HMG_3	-15	0	-	0	0	.
chr7	31183048	31183049	chr7:31183049:A:G	rs11543666	A	G	A	SOX2_HMG_3	34	0	+	0	0	.
chr7	31188472	31188473	chr7:31188473:C:G	rs11976529	C	G	C	SOX2_HMG_3	21	0	-	0	0	.
chr7	31337754	31337755	chr7:31337755:T:G	rs10238918	T	G	G	SOX2_HMG_3	21	0	-	0	0	.
chr7	31692539	31692540	chr7:31692540:T:C	rs142761417	T	C	T	SOX2_HMG_3	-1	0	+	0	0	.
chr7	31729618	31729619	chr7:31729619:G:C	rs6979462	G	C	G	SOX2_HMG_3	16	1	+	3.8143802592928098	1.8145377643762661	CATCAAGTGTATTGGAG
chr7	31885418	31885419	chr7:31885419:T:C	rs116213572	T	C	T	SOX2_HMG_3	11	1	+	4.96197122998154	-1.7307202682508094	GTGCAATTTCATTGTGG
chr7	31956483	31956484	chr7:31956484:G:C	rs73686851	G	C	G	SOX2_HMG_3	-11	0	-	0	0	.
chr7	32089071	32089072	chr7:32089072:C:T	chr7:32089072:C:T	C	T	C	SOX2_HMG_3	17	0	-	0	0	.
chr7	32283487	32283488	chr7:32283488:T:C	rs17161132	T	C	T	SOX2_HMG_3	-12	0	+	0	0	.
chr7	32472188	32472189	chr7:32472189:T:G	rs17362028	T	G	T	SOX2_HMG_3	-4	0	-	0	0	.
chr7	32958133	32958134	chr7:32958134:C:A	rs139042799	C	A	C	SOX2_HMG_3	36	0	+	0	0	.
chr7	33092116	33092117	chr7:33092117:G:A	rs12667900	G	A	G	SOX2_HMG_3	28	0	-	0	0	.
chr7	33675691	33675692	chr7:33675692:A:G	rs75903717	A	G	A	SOX2_HMG_3	-7	0	+	0	0	.
chr7	34088222	34088223	chr7:34088223:G:A	rs566879631	G	A	G	SOX2_HMG_3	26	0	+	0	0	.
chr7	34658369	34658370	chr7:34658370:A:G	rs887020	A	G	A	SOX2_HMG_3	-8	0	+	0	0	.
chr7	34660441	34660442	chr7:34660442:A:G	rs11761093	A	G	G	SOX2_HMG_3	29	0	-	0	0	.
chr7	34759268	34759269	chr7:34759269:T:C	rs75985874	T	C	T	SOX2_HMG_3	11	1	+	2.4899442103161737	-4.202747287916173	AATCAATGCTATAAAGG
chr7	35025914	35025915	chr7:35025915:A:C	rs329255	A	C	.	SOX2_HMG_3	6	1	-	4.204669098119929	-2.704085681195292	GACCAATGTCAGTGCTT
chr7	35255879	35255880	chr7:35255880:T:C	rs1003549	T	C	T	SOX2_HMG_3	28	0	+	0	0	.
chr7	35256168	35256169	chr7:35256169:A:C	rs28561590	A	C	C	SOX2_HMG_3	-6	0	-	0	0	.
chr7	35276836	35276837	chr7:35276837:A:T	rs17675327	A	T	A	SOX2_HMG_3	13	1	+	3.2051266541823615	3.2051266541823615	AATCAATCTTATTAATC
chr7	35360535	35360536	chr7:35360536:C:G	rs6462604	C	G	C	SOX2_HMG_3	-7	0	+	0	0	.
chr7	35482252	35482253	chr7:35482253:G:A	rs10242913	G	A	G	SOX2_HMG_3	7	1	+	4.322150683989857	1.5933635634285215	CCTCAAAGGTATTGTAG
chr7	35558056	35558057	chr7:35558057:A:G	rs72616356	A	G	A	SOX2_HMG_3	5	1	+	2.8239644219320263	-4.084790357383194	AGGCAATGGCATGGAGT
chr7	36058071	36058072	chr7:36058072:C:T	rs28520934	C	T	C	SOX2_HMG_3	11	1	-	3.9952716941508046	-1.2803398348615935	TAGCAATGGATGTGATG
chr7	36109041	36109042	chr7:36109042:C:A	rs10246132	C	A	C	SOX2_HMG_3	-5	0	+	0	0	.
chr7	36311671	36311672	chr7:36311672:C:T	rs111924802	C	T	C	SOX2_HMG_3	-10	0	-	0	0	.
chr7	36464460	36464461	chr7:36464461:T:C	rs17170599	T	C	C	SOX2_HMG_3	-1	0	+	0	0	.
chr7	36637035	36637036	chr7:36637036:A:G	rs73687593	A	G	a	SOX2_HMG_3	19	0	+	0	0	.
chr7	36742902	36742903	chr7:36742903:C:T	rs10488016	C	T	C	SOX2_HMG_3	-9	0	+	0	0	.
chr7	36828334	36828335	chr7:36828335:G:A	rs6949938	G	A	G	SOX2_HMG_3	-4	0	+	0	0	.
chr7	36844521	36844522	chr7:36844522:A:G	rs6462716	A	G	G	SOX2_HMG_3	1	1	+	2.9501750113250167	1.118527421245726	TATGAATGTTAGTCATG
chr7	36884485	36884486	chr7:36884486:C:A	rs3778712	C	A	a	SOX2_HMG_3	29	0	-	0	0	.
chr7	37446637	37446638	chr7:37446638:C:A	rs150631954	C	A	C	SOX2_HMG_3	5	1	-	2.1256163882734933	2.1256163882734933	GGGCAGTTCTAGTGATG
chr7	37794025	37794026	chr7:37794026:A:G	rs17825495	A	G	A	SOX2_HMG_3	18	0	+	0	0	.
chr7	38213262	38213263	chr7:38213263:G:A	rs12531618	G	A	G	SOX2_HMG_3	19	0	-	0	0	.
chr7	38399508	38399509	chr7:38399509:G:A	rs76567669	G	A	A	SOX2_HMG_3	-19	0	+	0	0	.
chr7	38557396	38557397	chr7:38557397:C:T	rs73124276	C	T	C	SOX2_HMG_3	-20	0	+	0	0	.
chr7	38682543	38682544	chr7:38682544:T:A	rs62442613	T	A	T	SOX2_HMG_3	24	0	+	0	0	.
chr7	38710235	38710236	chr7:38710236:A:T	rs1978172	A	T	a	SOX2_HMG_3	11	1	-	8.855912583470229	2.1632210852378813	GACCAATGATATTGTAA
chr7	38776337	38776338	chr7:38776338:T:C	rs78493385	T	C	C	SOX2_HMG_3	-1	0	+	0	0	.
chr7	38776344	38776345	chr7:38776345:G:C	rs11765467	G	C	C	SOX2_HMG_3	6	1	+	2.474726295382898	2.474726295382898	GATCAAGTTCATTGCTG
chr7	39083724	39083725	chr7:39083725:G:A	rs17171531	G	A	A	SOX2_HMG_3	17	0	-	0	0	.
chr7	39559707	39559708	chr7:39559708:C:T	rs7777969	C	T	C	SOX2_HMG_3	15	1	-	3.5889898555981645	4.021463437149065	GGTCAATGGTGGTGTGT
chr7	39622733	39622734	chr7:39622734:T:C	rs73689214	T	C	T	SOX2_HMG_3	-15	0	-	0	0	.
chr7	39734193	39734194	chr7:39734194:G:T	rs117042178	G	T	.	SOX2_HMG_3	13	1	+	3.4857386322145016	-3.4230161471007188	CGTCTATATAATTGAAA
chr7	39810331	39810332	chr7:39810332:C:T	rs4720341	C	T	.	SOX2_HMG_3	-16	0	-	0	0	.
chr7	40004682	40004683	chr7:40004683:A:G	rs773393	A	G	A	SOX2_HMG_3	11	1	-	3.6996943585860267	-2.99299713964632	AACCAGTGTTATTGAAC
chr7	40361776	40361777	chr7:40361777:G:A	rs6462979	G	A	A	SOX2_HMG_3	2	1	+	8.056245526956298	8.056245526956298	TAGCAATTGAAGTGATT
chr7	40764635	40764636	chr7:40764636:G:A	rs79730736	G	A	g	SOX2_HMG_3	22	0	+	0	0	.
chr7	40781320	40781321	chr7:40781321:A:G	rs12154576	A	G	A	SOX2_HMG_3	-14	0	-	0	0	.
chr7	40831171	40831172	chr7:40831172:C:T	rs10247275	C	T	C	SOX2_HMG_3	-15	0	-	0	0	.
chr7	41097374	41097375	chr7:41097375:C:T	rs116235239	C	T	C	SOX2_HMG_3	-8	0	+	0	0	.
chr7	41243506	41243507	chr7:41243507:G:A	rs35759722	G	A	G	SOX2_HMG_3	-19	0	-	0	0	.
chr7	41980270	41980271	chr7:41980271:A:C	rs10486730	A	C	A	SOX2_HMG_3	10	1	+	3.4127673973493793	-3.495987381965841	GCTCCATGTCAGTGTTT
chr7	42095895	42095896	chr7:42095896:C:G	rs3779146	C	G	C	SOX2_HMG_3	32	0	+	0	0	.
chr7	42162626	42162627	chr7:42162627:T:C	rs78630417	T	C	T	SOX2_HMG_3	-19	0	+	0	0	.
chr7	42162644	42162645	chr7:42162645:C:G	rs117013558	C	G	C	SOX2_HMG_3	-1	0	+	0	0	.
chr7	42574647	42574648	chr7:42574648:T:G	rs192673816	T	G	T	SOX2_HMG_3	-15	0	+	0	0	.
chr7	43044828	43044829	chr7:43044829:A:T	rs79849598	A	T	A	SOX2_HMG_3	-1	0	-	0	0	.
chr7	43431194	43431195	chr7:43431195:T:C	rs777395463	T	C	T	SOX2_HMG_3	-2	0	-	0	0	.
chr7	43731519	43731520	chr7:43731520:A:G	rs28412519	A	G	a	SOX2_HMG_3	4	1	+	3.081648774618673	-3.8271060046965464	AAACAATGTCCTTGGTG
chr7	44181981	44181982	chr7:44181982:A:C	rs758988	A	C	C	SOX2_HMG_3	-17	0	-	0	0	.
chr7	44538291	44538292	chr7:44538292:A:G	rs147201814	A	G	A	SOX2_HMG_3	1	1	+	7.521435483399317	5.689787893320027	AATCAATAGAAGTGTGT
chr7	44638078	44638079	chr7:44638079:C:T	rs116046892	C	T	T	SOX2_HMG_3	22	0	-	0	0	.
chr7	44638081	44638082	chr7:44638082:C:A	rs112127822	C	A	C	SOX2_HMG_3	19	0	-	0	0	.
chr7	44656125	44656126	chr7:44656126:T:C	rs2268314	T	C	C	SOX2_HMG_3	10	1	-	5.0473026131740815	-1.8614521661411398	GGTCAATTTTATTAAAC
chr7	44684226	44684227	chr7:44684227:A:G	rs7797184	A	G	A	SOX2_HMG_3	5	1	+	3.108269310575782	-3.8004854687394385	TCCCAATGGCATTGGGA
chr7	45005457	45005458	chr7:45005458:C:T	rs79484360	C	T	C	SOX2_HMG_3	36	0	+	0	0	.
chr7	45024440	45024441	chr7:45024441:G:C	rs884082	G	C	G	SOX2_HMG_3	16	1	-	4.562623804301952	6.562466299218496	TGACAATGACAGTGTTC
chr7	45187692	45187693	chr7:45187693:C:G	rs17172492	C	G	G	SOX2_HMG_3	-2	0	+	0	0	.
chr7	45187722	45187723	chr7:45187723:C:T	rs13229410	C	T	C	SOX2_HMG_3	28	0	+	0	0	.
chr7	45187724	45187725	chr7:45187725:A:G	rs35758250	A	G	A	SOX2_HMG_3	30	0	+	0	0	.
chr7	45189716	45189717	chr7:45189717:G:A	rs10951805	G	A	A	SOX2_HMG_3	-6	0	-	0	0	.
chr7	45312113	45312114	chr7:45312114:A:T	rs73105947	A	T	a	SOX2_HMG_3	20	0	+	0	0	.
chr7	45565942	45565943	chr7:45565943:C:T	rs73318920	C	T	C	SOX2_HMG_3	-11	0	+	0	0	.
chr7	45633223	45633224	chr7:45633224:G:A	rs12112588	G	A	A	SOX2_HMG_3	10	1	+	3.6485791848132423	10.557333964128462	GGCCAATGCTGTTGATT
chr7	45882753	45882754	chr7:45882754:C:T	rs73104683	C	T	C	SOX2_HMG_3	34	0	+	0	0	.
chr7	45915373	45915374	chr7:45915374:G:C	rs35440925	G	C	G	SOX2_HMG_3	-9	0	+	0	0	.
chr7	45980022	45980023	chr7:45980023:C:T	rs1723959	C	T	C	SOX2_HMG_3	20	0	+	0	0	.
chr7	46034050	46034051	chr7:46034051:C:G	rs1540824	C	G	G	SOX2_HMG_3	23	0	+	0	0	.
chr7	46107525	46107526	chr7:46107526:C:T	rs146074069	C	T	C	SOX2_HMG_3	13	1	-	2.102205935794769	-4.806548843520451	CCCCAATGGCAGTGGGG
chr7	46110133	46110134	chr7:46110134:A:G	rs788780	A	G	A	SOX2_HMG_3	35	0	-	0	0	.
chr7	46119143	46119144	chr7:46119144:G:T	rs12532079	G	T	g	SOX2_HMG_3	26	0	-	0	0	.
chr7	46126904	46126905	chr7:46126905:C:G	rs13231830	C	G	C	SOX2_HMG_3	-5	0	-	0	0	.
chr7	46133527	46133528	chr7:46133528:T:C	rs6970565	T	C	C	SOX2_HMG_3	33	0	-	0	0	.
chr7	46206676	46206677	chr7:46206677:G:A	rs114615235	G	A	G	SOX2_HMG_3	-4	0	-	0	0	.
chr7	46206682	46206683	chr7:46206683:C:A	rs537948336	C	A	C	SOX2_HMG_3	-10	0	-	0	0	.
chr7	46233652	46233653	chr7:46233653:C:A	rs1601540	C	A	C	SOX2_HMG_3	13	1	-	3.674344763786539	-3.2344100155286815	GATCAAATTGATTGATG
chr7	46247713	46247714	chr7:46247714:C:T	rs28696071	C	T	C	SOX2_HMG_3	-1	0	-	0	0	.
chr7	46383601	46383602	chr7:46383602:G:T	rs1462279	G	T	T	SOX2_HMG_3	-12	0	-	0	0	.
chr7	46559248	46559249	chr7:46559249:G:A	rs12534559	G	A	G	SOX2_HMG_3	-15	0	+	0	0	.
chr7	46589433	46589434	chr7:46589434:A:G	rs10258175	A	G	A	SOX2_HMG_3	10	1	+	5.083842163712005	-1.8249126156032167	AAACAATGATATTTATC
chr7	46606923	46606924	chr7:46606924:C:T	chr7:46606924:C:T	C	T	C	SOX2_HMG_3	-9	0	+	0	0	.
chr7	46633933	46633934	chr7:46633934:C:T	rs117947975	C	T	c	SOX2_HMG_3	1	1	-	3.274813464701054	5.106461054780345	CGTCAAGTAAAGTGATG
chr7	46654460	46654461	chr7:46654461:C:T	rs34731851	C	T	C	SOX2_HMG_3	0	1	-	3.554386253822961	3.333791974737667	GTTCAGTGGCATTGTGA
chr7	47000893	47000894	chr7:47000894:G:A	rs28375712	G	A	A	SOX2_HMG_3	-3	0	+	0	0	.
chr7	47087142	47087143	chr7:47087143:A:G	rs13228012	A	G	G	SOX2_HMG_3	-20	0	-	0	0	.
chr7	47139763	47139764	chr7:47139764:A:T	rs1583674	A	T	A	SOX2_HMG_3	-8	0	+	0	0	.
chr7	47228244	47228245	chr7:47228245:C:T	rs146136416	C	T	C	SOX2_HMG_3	-5	0	-	0	0	.
chr7	47294048	47294049	chr7:47294049:C:T	rs57198477	C	T	C	SOX2_HMG_3	-9	0	+	0	0	.
chr7	47294059	47294060	chr7:47294060:G:A	rs149268955	G	A	G	SOX2_HMG_3	2	1	+	3.720694018506847	3.720694018506847	TTGCAATGACAGTGTGG
chr7	47441612	47441613	chr7:47441613:A:G	rs13231464	A	G	A	SOX2_HMG_3	34	0	+	0	0	.
chr7	47458765	47458766	chr7:47458766:G:A	rs2941549	G	A	G	SOX2_HMG_3	30	0	-	0	0	.
chr7	47509571	47509572	chr7:47509572:G:A	rs182838	G	A	G	SOX2_HMG_3	-7	0	+	0	0	.
chr7	47561483	47561484	chr7:47561484:C:T	rs12155302	C	T	C	SOX2_HMG_3	36	0	-	0	0	.
chr7	47699711	47699712	chr7:47699712:C:T	rs534604609	C	T	C	SOX2_HMG_3	-2	0	-	0	0	.
chr7	47969068	47969069	chr7:47969069:A:G	rs3176582	A	G	G	SOX2_HMG_3	25	0	-	0	0	.
chr7	48031060	48031061	chr7:48031061:C:T	rs1915968	C	T	T	SOX2_HMG_3	11	1	-	2.9902198314896973	-2.2853916975227007	GACCAATGTCAGGGAGA
chr7	48085233	48085234	chr7:48085234:T:C	rs11971012	T	C	T	SOX2_HMG_3	18	0	-	0	0	.
chr7	48110723	48110724	chr7:48110724:T:C	rs112645772	T	C	T	SOX2_HMG_3	-8	0	+	0	0	.
chr7	48431836	48431837	chr7:48431837:C:T	rs7357104	C	T	T	SOX2_HMG_3	25	0	-	0	0	.
chr7	48680999	48681000	chr7:48681000:A:G	rs35316325	A	G	A	SOX2_HMG_3	6	1	-	5.33461209287101	-1.5741426864442098	CATTAATTGAATTGAAT
chr7	48875228	48875229	chr7:48875229:C:A	rs17132754	C	A	C	SOX2_HMG_3	36	0	+	0	0	.
chr7	48964284	48964285	chr7:48964285:C:G	rs17132832	C	G	C	SOX2_HMG_3	-8	0	-	0	0	.
chr7	50121656	50121657	chr7:50121657:T:C	rs2366033	T	C	T	SOX2_HMG_3	29	0	+	0	0	.
chr7	50136057	50136058	chr7:50136058:G:A	rs12718244	G	A	G	SOX2_HMG_3	22	0	-	0	0	.
chr7	50136084	50136085	chr7:50136085:C:T	rs12672941	C	T	T	SOX2_HMG_3	-5	0	-	0	0	.
chr7	50178253	50178254	chr7:50178254:G:T	rs1037674	G	T	G	SOX2_HMG_3	17	0	-	0	0	.
chr7	50214243	50214244	chr7:50214244:C:T	chr7:50214244:C:T	C	T	C	SOX2_HMG_3	3	1	+	2.6367891909868777	-4.271965588328342	TGTCAAATCCAGTGAGG
chr7	50263052	50263053	chr7:50263053:G:A	rs762293009	G	A	G	SOX2_HMG_3	34	0	-	0	0	.
chr7	50366325	50366326	chr7:50366326:G:A	rs62447200	G	A	G	SOX2_HMG_3	20	0	+	0	0	.
chr7	50406617	50406618	chr7:50406618:G:C	rs79198599	G	C	G	SOX2_HMG_3	-9	0	-	0	0	.
chr7	50480952	50480953	chr7:50480953:C:T	rs4948196	C	T	c	SOX2_HMG_3	-20	0	+	0	0	.
chr7	50497275	50497276	chr7:50497276:A:G	rs1046189686	A	G	A	SOX2_HMG_3	32	0	+	0	0	.
chr7	50806321	50806322	chr7:50806322:C:T	rs7802338	C	T	c	SOX2_HMG_3	-5	0	-	0	0	.
chr7	50806336	50806337	chr7:50806337:C:T	rs148853173	C	T	C	SOX2_HMG_3	-20	0	-	0	0	.
chr7	50843980	50843981	chr7:50843981:T:C	rs10230084	T	C	c	SOX2_HMG_3	19	0	-	0	0	.
chr7	50859077	50859078	chr7:50859078:G:A	rs7789720	G	A	G	SOX2_HMG_3	-6	0	+	0	0	.
chr7	51163252	51163253	chr7:51163253:C:A	rs7792847	C	A	C	SOX2_HMG_3	33	0	+	0	0	.
chr7	51577519	51577520	chr7:51577520:A:T	rs2079823	A	T	A	SOX2_HMG_3	-9	0	+	0	0	.
chr7	52506447	52506448	chr7:52506448:G:A	rs6979554	G	A	.	SOX2_HMG_3	-12	0	+	0	0	.
chr7	52506465	52506466	chr7:52506466:C:G	rs6942636	C	G	C	SOX2_HMG_3	6	1	+	3.616288858620044	3.616288858620044	AGTCAACTACAGTGAAG
chr7	52536511	52536512	chr7:52536512:C:T	rs10240307	C	T	T	SOX2_HMG_3	18	0	-	0	0	.
chr7	52541448	52541449	chr7:52541449:A:G	rs59668700	A	G	A	SOX2_HMG_3	18	0	+	0	0	.
chr7	52541457	52541458	chr7:52541458:C:G	rs113262481	C	G	C	SOX2_HMG_3	27	0	+	0	0	.
chr7	52786271	52786272	chr7:52786272:C:G	rs117102747	C	G	C	SOX2_HMG_3	-7	0	+	0	0	.
chr7	52834703	52834704	chr7:52834704:A:G	rs2965626	A	G	G	SOX2_HMG_3	25	0	+	0	0	.
chr7	53191705	53191706	chr7:53191706:T:C	rs1357965	T	C	N	SOX2_HMG_3	4	1	-	5.892331236965351	-1.0164235423498709	GATCAATTTTATTTTAA
chr7	53624468	53624469	chr7:53624469:A:G	rs17135909	A	G	A	SOX2_HMG_3	-3	0	-	0	0	.
chr7	54351327	54351328	chr7:54351328:A:G	rs10249215	A	G	G	SOX2_HMG_3	20	0	-	0	0	.
chr7	54550316	54550317	chr7:54550317:C:T	rs2293343	C	T	c	SOX2_HMG_3	32	0	+	0	0	.
chr7	55139167	55139168	chr7:55139168:G:T	rs887824	G	T	G	SOX2_HMG_3	13	1	+	6.32923502223875	-0.5795197570764707	GATCAACGTTATTGTCA
chr7	55167651	55167652	chr7:55167652:C:T	rs73137522	C	T	T	SOX2_HMG_3	15	1	+	2.731971189411461	5.57468034558832	TCACAATGGTAGTGGCG
chr7	55206390	55206391	chr7:55206391:T:C	rs884225	T	C	T	SOX2_HMG_3	-16	0	-	0	0	.
chr7	55536705	55536706	chr7:55536706:A:C	rs17565995	A	C	A	SOX2_HMG_3	14	1	+	6.439984468469397	-0.3923142370972954	GAACAATGACACTGATA
chr7	55823032	55823033	chr7:55823033:G:A	rs73354524	G	A	G	SOX2_HMG_3	-13	0	-	0	0	.
chr7	55912958	55912959	chr7:55912959:C:T	rs111375108	C	T	C	SOX2_HMG_3	-16	0	-	0	0	.
chr7	56286679	56286680	chr7:56286680:C:T	rs117126626	C	T	.	SOX2_HMG_3	34	0	+	0	0	.
chr7	56806631	56806632	chr7:56806632:G:A	rs148648344	G	A	G	SOX2_HMG_3	24	0	-	0	0	.
chr7	57200842	57200843	chr7:57200843:C:T	rs11971540	C	T	-	SOX2_HMG_3	-18	0	+	0	0	.
chr7	57217340	57217341	chr7:57217341:G:T	rs113700686	G	T	-	SOX2_HMG_3	24	0	+	0	0	.
chr7	57329003	57329004	chr7:57329004:C:T	rs73699759	C	T	c	SOX2_HMG_3	34	0	+	0	0	.
chr7	62350272	62350273	chr7:62350273:T:C	rs79542864	T	C	.	SOX2_HMG_3	24	0	+	0	0	.
chr7	62410863	62410864	chr7:62410864:A:G	rs1198263383	A	G	N	SOX2_HMG_3	22	0	+	0	0	.
chr7	64471173	64471174	chr7:64471174:C:A	rs80216832	C	A	C	SOX2_HMG_3	32	0	+	0	0	.
chr7	64860988	64860989	chr7:64860989:A:G	rs1965558	A	G	A	SOX2_HMG_3	23	0	+	0	0	.
chr7	66034843	66034844	chr7:66034844:A:G	rs28638468	A	G	.	SOX2_HMG_3	11	1	-	5.088163951748977	-1.6045275464833688	GACAAATGACATTGATA
chr7	66143850	66143851	chr7:66143851:T:C	rs316328	T	C	C	SOX2_HMG_3	12	1	+	3.358676697972291	-3.5500780813429302	AATAAATGGTAGTGGCG
chr7	66960638	66960639	chr7:66960639:C:T	rs17748198	C	T	C	SOX2_HMG_3	13	1	-	4.42117033636993	-2.48758444294529	GGGAAATGTTATTGAAT
chr7	67067306	67067307	chr7:67067307:G:C	chr7:67067307:G:C	G	C	G	SOX2_HMG_3	-16	0	+	0	0	.
chr7	67137541	67137542	chr7:67137542:A:G	rs79302106	A	G	A	SOX2_HMG_3	14	1	-	5.545856947694617	1.4263320869422176	GCCCAATGGAATTGTTT
chr7	67448097	67448098	chr7:67448098:T:C	rs78299258	T	C	T	SOX2_HMG_3	1	1	-	2.4233954230129076	0.5917478329336163	CATCAAGGCAAGTGACC
chr7	67793802	67793803	chr7:67793803:T:A	rs7781614	T	A	A	SOX2_HMG_3	25	0	+	0	0	.
chr7	68265552	68265553	chr7:68265553:T:C	rs3113130	T	C	C	SOX2_HMG_3	10	1	-	3.6624591233878645	-3.2462956559273555	GGGCAATGCTAGTGGAC
chr7	68321034	68321035	chr7:68321035:G:A	rs148257377	G	A	G	SOX2_HMG_3	21	0	+	0	0	.
chr7	68364888	68364889	chr7:68364889:G:T	rs13234286	G	T	G	SOX2_HMG_3	27	0	+	0	0	.
chr7	68511671	68511672	chr7:68511672:A:G	rs1879839	A	G	G	SOX2_HMG_3	-3	0	-	0	0	.
chr7	68943460	68943461	chr7:68943461:C:T	rs7799061	C	T	C	SOX2_HMG_3	2	1	-	3.1206869927544165	3.1206869927544165	CAGCAGTTCTATTGAAA
chr7	69061853	69061854	chr7:69061854:T:C	rs12671836	T	C	T	SOX2_HMG_3	6	1	+	8.203565724711648	1.2948109453964272	AATCAATGACCTTGAGA
chr7	69127265	69127266	chr7:69127266:T:C	rs7790352	T	C	T	SOX2_HMG_3	-7	0	-	0	0	.
chr7	69845807	69845808	chr7:69845808:T:C	rs78351301	T	C	T	SOX2_HMG_3	-18	0	+	0	0	.
chr7	70121963	70121964	chr7:70121964:T:C	rs9638268	T	C	C	SOX2_HMG_3	-8	0	-	0	0	.
chr7	70132085	70132086	chr7:70132086:G:A	rs7783592	G	A	G	SOX2_HMG_3	-13	0	-	0	0	.
chr7	70387780	70387781	chr7:70387781:T:C	rs75501049	T	C	T	SOX2_HMG_3	10	1	-	9.63365235835483	2.7248975790396095	GGGCAATGACATTGAGA
chr7	70566581	70566582	chr7:70566582:G:C	rs2214715	G	C	C	SOX2_HMG_3	-20	0	-	0	0	.
chr7	70567067	70567068	chr7:70567068:C:G	rs4717534	C	G	C	SOX2_HMG_3	27	0	-	0	0	.
chr7	70744956	70744957	chr7:70744957:C:T	rs6942750	C	T	C	SOX2_HMG_3	-6	0	+	0	0	.
chr7	70889385	70889386	chr7:70889386:C:T	rs1534346	C	T	C	SOX2_HMG_3	-7	0	-	0	0	.
chr7	71402758	71402759	chr7:71402759:A:C	rs34419262	A	C	A	SOX2_HMG_3	6	1	-	7.229627369907013	0.32087259059179274	AAACAATGCCAGTGTGA
chr7	71568228	71568229	chr7:71568229:G:A	rs189183434	G	A	G	SOX2_HMG_3	21	0	+	0	0	.
chr7	71626535	71626536	chr7:71626536:C:T	rs11762927	C	T	C	SOX2_HMG_3	29	0	-	0	0	.
chr7	71729135	71729136	chr7:71729136:A:G	rs517781	A	G	A	SOX2_HMG_3	-19	0	-	0	0	.
chr7	71739538	71739539	chr7:71739539:T:C	rs73177692	T	C	T	SOX2_HMG_3	35	0	-	0	0	.
chr7	71752030	71752031	chr7:71752031:T:C	rs10235229	T	C	T	SOX2_HMG_3	2	1	+	4.401615063789653	-0.6017570065259348	GTTCAATGTTATTTTAT
chr7	71752033	71752034	chr7:71752034:A:G	rs10232040	A	G	A	SOX2_HMG_3	5	1	+	4.401615063789653	-2.5071397155255686	GTTCAATGTTATTTTAT
chr7	71768384	71768385	chr7:71768385:C:A	rs992124	C	A	A	SOX2_HMG_3	-12	0	-	0	0	.
chr7	72366949	72366950	chr7:72366950:T:C	rs2944799	T	C	t	SOX2_HMG_3	-3	0	-	0	0	.
chr7	72542865	72542866	chr7:72542866:G:A	rs10229194	G	A	G	SOX2_HMG_3	32	0	+	0	0	.
chr7	73774948	73774949	chr7:73774949:A:G	rs10236342	A	G	A	SOX2_HMG_3	-4	0	-	0	0	.
chr7	74628494	74628495	chr7:74628495:A:C	rs111361634	A	C	A	SOX2_HMG_3	29	0	+	0	0	.
chr7	74988728	74988729	chr7:74988729:C:T	rs587657421	C	T	C	SOX2_HMG_3	0	1	+	2.5038143427662325	2.366485364717568	CGACCATGACAGTGATG
chr7	75565235	75565236	chr7:75565236:C:T	rs191430881	C	T	c	SOX2_HMG_3	24	0	+	0	0	.
chr7	75565245	75565246	chr7:75565246:G:A	rs183623160	G	A	g	SOX2_HMG_3	34	0	+	0	0	.
chr7	75743660	75743661	chr7:75743661:T:C	rs1859293	T	C	C	SOX2_HMG_3	1	1	-	6.129132891198945	4.297485301119653	AAGCAATGTTATTAAGA
chr7	76291361	76291362	chr7:76291362:T:G	rs569850910	T	G	T	SOX2_HMG_3	31	0	-	0	0	.
chr7	76507966	76507967	chr7:76507967:A:C	rs2110465	A	C	.	SOX2_HMG_3	-18	0	+	0	0	.
chr7	76924845	76924846	chr7:76924846:A:G	rs10255719	A	G	A	SOX2_HMG_3	-15	0	+	0	0	.
chr7	77152933	77152934	chr7:77152934:A:C	rs144455686	A	C	A	SOX2_HMG_3	14	1	-	3.616128427864683	2.147024655377857	TTTCAGTGTTATTGTGA
chr7	77395596	77395597	chr7:77395597:T:G	rs1006596164	T	G	T	SOX2_HMG_3	-7	0	+	0	0	.
chr7	77450743	77450744	chr7:77450744:C:A	rs1017036	C	A	C	SOX2_HMG_3	20	0	-	0	0	.
chr7	78055498	78055499	chr7:78055499:C:T	rs3779325	C	T	C	SOX2_HMG_3	-6	0	-	0	0	.
chr7	78055504	78055505	chr7:78055505:T:C	rs3779324	T	C	C	SOX2_HMG_3	-12	0	-	0	0	.
chr7	78127406	78127407	chr7:78127407:C:T	rs7812015	C	T	C	SOX2_HMG_3	-13	0	+	0	0	.
chr7	78311285	78311286	chr7:78311286:G:C	rs798287	G	C	T	SOX2_HMG_3	-19	0	+	0	0	.
chr7	78413751	78413752	chr7:78413752:A:G	rs138417935	A	G	A	SOX2_HMG_3	17	0	+	0	0	.
chr7	78449107	78449108	chr7:78449108:C:A	rs117460038	C	A	C	SOX2_HMG_3	32	0	-	0	0	.
chr7	78498440	78498441	chr7:78498441:T:A	rs4730332	T	A	A	SOX2_HMG_3	-7	0	+	0	0	.
chr7	78603135	78603136	chr7:78603136:T:A	rs22535	T	A	A	SOX2_HMG_3	20	0	+	0	0	.
chr7	79347492	79347493	chr7:79347493:T:C	rs848932	T	C	T	SOX2_HMG_3	5	1	-	6.444456617765976	-0.4642981615492443	TCTCAATGTCAATGAAG
chr7	79610960	79610961	chr7:79610961:G:C	rs73377607	G	C	G	SOX2_HMG_3	15	1	-	4.469390055267037	5.644723193176272	TGTCAAAGTAATTGACA
chr7	79660712	79660713	chr7:79660713:A:G	rs2689818	A	G	G	SOX2_HMG_3	-5	0	+	0	0	.
chr7	79773234	79773235	chr7:79773235:C:T	rs10499847	C	T	C	SOX2_HMG_3	22	0	-	0	0	.
chr7	80233553	80233554	chr7:80233554:C:G	rs4731301	C	G	C	SOX2_HMG_3	-6	0	+	0	0	.
chr7	80387440	80387441	chr7:80387441:G:A	rs304782	G	A	G	SOX2_HMG_3	33	0	+	0	0	.
chr7	80549297	80549298	chr7:80549298:C:T	rs112905381	C	T	C	SOX2_HMG_3	21	0	+	0	0	.
chr7	80763899	80763900	chr7:80763900:T:C	rs3823478	T	C	T	SOX2_HMG_3	5	1	-	6.654115645943375	-0.25463913337184707	CGTCAATGATATTCAGA
chr7	80874135	80874136	chr7:80874136:A:G	rs58283863	A	G	A	SOX2_HMG_3	25	0	+	0	0	.
chr7	80924055	80924056	chr7:80924056:G:T	rs6976815	G	T	T	SOX2_HMG_3	35	0	-	0	0	.
chr7	80924086	80924087	chr7:80924087:G:A	rs1457776052	G	A	G	SOX2_HMG_3	4	1	-	4.465332805983673	4.465332805983673	AGTCCATTGCAGTGAAG
chr7	80942147	80942148	chr7:80942148:C:T	rs4731944	C	T	T	SOX2_HMG_3	-13	0	-	0	0	.
chr7	80968207	80968208	chr7:80968208:T:A	rs76829266	T	A	T	SOX2_HMG_3	29	0	-	0	0	.
chr7	80992266	80992267	chr7:80992267:G:A	rs853045	G	A	G	SOX2_HMG_3	-5	0	+	0	0	.
chr7	81736472	81736473	chr7:81736473:A:G	rs12671260	A	G	A	SOX2_HMG_3	5	1	+	4.174283158463734	-2.7344716208514854	ATTCTATTTTATTGTTG
chr7	82035534	82035535	chr7:82035535:A:G	rs10235670	A	G	A	SOX2_HMG_3	-2	0	-	0	0	.
chr7	82078961	82078962	chr7:82078962:T:A	rs1862123	T	A	A	SOX2_HMG_3	-18	0	+	0	0	.
chr7	82079001	82079002	chr7:82079002:G:T	rs1011696	G	T	G	SOX2_HMG_3	22	0	+	0	0	.
chr7	82094177	82094178	chr7:82094178:A:T	rs2068378	A	T	A	SOX2_HMG_3	26	0	-	0	0	.
chr7	82128410	82128411	chr7:82128411:G:A	rs258692	G	A	A	SOX2_HMG_3	-6	0	-	0	0	.
chr7	82131401	82131402	chr7:82131402:C:T	rs258700	C	T	T	SOX2_HMG_3	18	0	-	0	0	.
chr7	82468607	82468608	chr7:82468608:G:C	rs4728514	G	C	C	SOX2_HMG_3	-11	0	+	0	0	.
chr7	82468643	82468644	chr7:82468644:C:T	rs1398014971	C	T	C	SOX2_HMG_3	25	0	+	0	0	.
chr7	82756415	82756416	chr7:82756416:G:T	rs1859174	G	T	.	SOX2_HMG_3	-2	0	+	0	0	.
chr7	82839057	82839058	chr7:82839058:A:G	rs2715157	A	G	A	SOX2_HMG_3	19	0	-	0	0	.
chr7	83211896	83211897	chr7:83211897:A:G	rs11773318	A	G	A	SOX2_HMG_3	3	1	-	2.192203731678555	9.100958510993777	AATTAATGCCATTGCAG
chr7	83268019	83268020	chr7:83268020:G:A	rs17289395	G	A	G	SOX2_HMG_3	2	1	+	7.486990286400356	7.486990286400356	TAGCAATGGTAATGATG
chr7	83418268	83418269	chr7:83418269:A:C	rs2713146	A	C	A	SOX2_HMG_3	-9	0	-	0	0	.
chr7	83526099	83526100	chr7:83526100:C:G	rs1001617308	C	G	C	SOX2_HMG_3	-9	0	+	0	0	.
chr7	83879244	83879245	chr7:83879245:A:G	chr7:83879245:A:G	A	G	A	SOX2_HMG_3	19	0	+	0	0	.
chr7	83879257	83879258	chr7:83879258:A:G	rs17158309	A	G	A	SOX2_HMG_3	32	0	+	0	0	.
chr7	84040284	84040285	chr7:84040285:A:G	rs4732536	A	G	G	SOX2_HMG_3	-4	0	-	0	0	.
chr7	84041064	84041065	chr7:84041065:G:T	rs6965653	G	T	T	SOX2_HMG_3	-2	0	+	0	0	.
chr7	84122799	84122800	chr7:84122800:T:A	rs17158642	T	A	T	SOX2_HMG_3	20	0	+	0	0	.
chr7	84148434	84148435	chr7:84148435:T:C	rs6959163	T	C	T	SOX2_HMG_3	35	0	+	0	0	.
chr7	84207840	84207841	chr7:84207841:C:A	rs13230138	C	A	C	SOX2_HMG_3	-16	0	-	0	0	.
chr7	84399319	84399320	chr7:84399320:G:A	rs6948391	G	A	G	SOX2_HMG_3	-14	0	+	0	0	.
chr7	84437406	84437407	chr7:84437407:C:T	rs79903667	C	T	C	SOX2_HMG_3	11	1	-	5.152573502183781	-0.12303802682861581	TATCAATTTAAGTAATT
chr7	84538507	84538508	chr7:84538508:T:C	rs62472051	T	C	T	SOX2_HMG_3	25	0	-	0	0	.
chr7	84790938	84790939	chr7:84790939:A:G	rs891484	A	G	a	SOX2_HMG_3	-9	0	-	0	0	.
chr7	85336476	85336477	chr7:85336477:A:T	rs2696173	A	T	A	SOX2_HMG_3	5	1	+	3.803953189714961	-3.1048015896002594	ACAAAATGATATTGATA
chr7	85529749	85529750	chr7:85529750:G:A	rs73201589	G	A	G	SOX2_HMG_3	31	0	-	0	0	.
chr7	85529798	85529799	chr7:85529799:C:G	rs10281723	C	G	C	SOX2_HMG_3	-18	0	-	0	0	.
chr7	85891029	85891030	chr7:85891030:G:C	rs4377889	G	C	G	SOX2_HMG_3	19	0	+	0	0	.
chr7	86642977	86642978	chr7:86642978:C:T	rs166677	C	T	C	SOX2_HMG_3	-3	0	+	0	0	.
chr7	87332045	87332046	chr7:87332046:T:C	rs802031	T	C	C	SOX2_HMG_3	-20	0	-	0	0	.
chr7	88269279	88269280	chr7:88269280:T:C	rs17349864	T	C	T	SOX2_HMG_3	1	1	-	2.143365935571972	0.31171834549268085	CATCAGTGGCAGTCATG
chr7	88311597	88311598	chr7:88311598:T:C	rs147955192	T	C	T	SOX2_HMG_3	-16	0	+	0	0	.
chr7	88317661	88317662	chr7:88317662:G:A	rs916849	G	A	G	SOX2_HMG_3	24	0	-	0	0	.
chr7	88639664	88639665	chr7:88639665:A:G	rs6465147	A	G	G	SOX2_HMG_3	-7	0	+	0	0	.
chr7	88928868	88928869	chr7:88928869:T:C	rs1528932	T	C	T	SOX2_HMG_3	-19	0	-	0	0	.
chr7	88965336	88965337	chr7:88965337:A:G	rs139140065	A	G	A	SOX2_HMG_3	11	1	-	3.7646033718594976	-2.9280881263728484	GAGAAATTCCATTGATT
chr7	89105879	89105880	chr7:89105880:G:T	chr7:89105880:G:T	G	T	G	SOX2_HMG_3	13	1	+	4.262564073188303	-2.646190706126918	GTTCAATTAATTTGATG
chr7	89145733	89145734	chr7:89145734:T:G	rs1014759	T	G	G	SOX2_HMG_3	20	0	+	0	0	.
chr7	89678257	89678258	chr7:89678258:A:G	rs2373957	A	G	A	SOX2_HMG_3	6	1	-	9.619293268716687	2.7105384894014666	GATCAGTGCTATTGAGG
chr7	89914841	89914842	chr7:89914842:T:C	rs73211534	T	C	T	SOX2_HMG_3	12	1	+	3.205577331386794	-3.7031774479284256	ATGCAAGGTAATTGATG
chr7	90433546	90433547	chr7:90433547:A:G	rs62469393	A	G	A	SOX2_HMG_3	32	0	-	0	0	.
chr7	90433578	90433579	chr7:90433579:C:T	rs57846273	C	T	C	SOX2_HMG_3	0	1	-	3.369077520803798	3.1484832417185045	GAACAGTGGAAGTGAAA
chr7	90433579	90433580	chr7:90433580:G:A	rs118087621	G	A	G	SOX2_HMG_3	-1	0	-	0	0	.
chr7	90760330	90760331	chr7:90760331:G:C	rs2213980	G	C	C	SOX2_HMG_3	6	1	+	5.966787357763307	5.966787357763307	GGTCAAGTTCATTGAAA
chr7	90776803	90776804	chr7:90776804:G:C	rs17163176	G	C	G	SOX2_HMG_3	5	1	-	2.0393888899196666	2.0393888899196666	GATCACGGACAGTGATG
chr7	90825701	90825702	chr7:90825702:T:C	rs2188237	T	C	T	SOX2_HMG_3	-6	0	+	0	0	.
chr7	90825710	90825711	chr7:90825711:C:G	rs2188235	C	G	G	SOX2_HMG_3	3	1	+	4.887500871367183	-2.0212539079480374	GCTCAATTTTAGGGATT
chr7	90886717	90886718	chr7:90886718:C:G	rs12537076	C	G	C	SOX2_HMG_3	34	0	+	0	0	.
chr7	91107476	91107477	chr7:91107477:A:G	rs2073986	A	G	A	SOX2_HMG_3	31	0	-	0	0	.
chr7	91195014	91195015	chr7:91195015:T:C	rs1036172773	T	C	T	SOX2_HMG_3	20	0	+	0	0	.
chr7	91311581	91311582	chr7:91311582:C:T	rs55646004	C	T	T	SOX2_HMG_3	29	0	-	0	0	.
chr7	91346816	91346817	chr7:91346817:A:T	rs11762520	A	T	A	SOX2_HMG_3	31	0	+	0	0	.
chr7	91657600	91657601	chr7:91657601:A:G	rs113556641	A	G	A	SOX2_HMG_3	0	1	+	4.308403949855261	4.528998228940557	AGTCAATGGGAGTGTTC
chr7	91692299	91692300	chr7:91692300:T:C	rs1916600	T	C	T	SOX2_HMG_3	28	0	+	0	0	.
chr7	92695131	92695132	chr7:92695132:G:A	rs148430372	G	A	G	SOX2_HMG_3	-1	0	+	0	0	.
chr7	92719001	92719002	chr7:92719002:T:G	rs73406759	T	G	T	SOX2_HMG_3	-2	0	-	0	0	.
chr7	92987653	92987654	chr7:92987654:C:T	rs17699960	C	T	C	SOX2_HMG_3	-7	0	-	0	0	.
chr7	93117647	93117648	chr7:93117648:C:T	rs10233715	C	T	T	SOX2_HMG_3	28	0	+	0	0	.
chr7	93142385	93142386	chr7:93142386:G:T	rs948146819	G	T	G	SOX2_HMG_3	-8	0	+	0	0	.
chr7	93923188	93923189	chr7:93923189:A:G	rs7785521	A	G	A	SOX2_HMG_3	5	1	+	5.055314108411599	-1.853440670903621	AAACAATGGAAATGAAG
chr7	94005363	94005364	chr7:94005364:A:G	rs78773091	A	G	A	SOX2_HMG_3	6	1	-	3.4134722722232413	-3.495282507091978	AGTCAATGTTAATAATG
chr7	94041216	94041217	chr7:94041217:A:G	rs10487243	A	G	A	SOX2_HMG_3	10	1	+	8.538935518389373	1.6301807390741503	GATCAATGCCATTAAGA
chr7	94403440	94403441	chr7:94403441:A:G	rs1858822	A	G	A	SOX2_HMG_3	-11	0	+	0	0	.
chr7	94404487	94404488	chr7:94404488:A:G	rs406226	A	G	A	SOX2_HMG_3	-11	0	-	0	0	.
chr7	94426620	94426621	chr7:94426621:T:C	rs13240759	T	C	T	SOX2_HMG_3	-4	0	-	0	0	.
chr7	95537891	95537892	chr7:95537892:C:T	rs6465467	C	T	T	SOX2_HMG_3	8	1	-	6.281343330008031	5.432299382644404	GATTAATGGCAGTGTTT
chr7	95545872	95545873	chr7:95545873:T:C	rs12704801	T	C	T	SOX2_HMG_3	25	0	+	0	0	.
chr7	95630142	95630143	chr7:95630143:C:T	rs58209481	C	T	C	SOX2_HMG_3	-1	0	-	0	0	.
chr7	95631619	95631620	chr7:95631620:G:A	rs6971063	G	A	G	SOX2_HMG_3	-14	0	-	0	0	.
chr7	95694610	95694611	chr7:95694611:G:A	rs854100	G	A	G	SOX2_HMG_3	3	1	-	3.4594408278435043	-3.4493139514717144	CAGCTATTTCATTGAAG
chr7	95794871	95794872	chr7:95794872:A:G	rs74854159	A	G	A	SOX2_HMG_3	15	1	-	5.9515677862130625	3.108858630036204	TCTCAATTTTATTCATA
chr7	95809324	95809325	chr7:95809325:G:T	rs1478986	G	T	T	SOX2_HMG_3	-1	0	-	0	0	.
chr7	95925603	95925604	chr7:95925604:A:C	rs10280608	A	C	A	SOX2_HMG_3	23	0	-	0	0	.
chr7	97001922	97001923	chr7:97001923:A:T	rs2240295	A	T	A	SOX2_HMG_3	-19	0	-	0	0	.
chr7	97399951	97399952	chr7:97399952:T:C	rs79552220	T	C	T	SOX2_HMG_3	-1	0	-	0	0	.
chr7	98079050	98079051	chr7:98079051:C:G	rs62479765	C	G	C	SOX2_HMG_3	36	0	+	0	0	.
chr7	98399824	98399825	chr7:98399825:A:C	rs1045156814	A	C	A	SOX2_HMG_3	-6	0	+	0	0	.
chr7	98399841	98399842	chr7:98399842:T:C	rs74416888	T	C	T	SOX2_HMG_3	11	1	+	5.966787357763307	-0.7259041404690398	GGTCAATTTCATTAAAA
chr7	98810134	98810135	chr7:98810135:C:T	rs10245517	C	T	T	SOX2_HMG_3	-4	0	+	0	0	.
chr7	99003596	99003597	chr7:99003597:A:G	rs563675641	A	G	A	SOX2_HMG_3	12	1	-	4.9450083001016	-1.9637464792136203	GAACAATGCCGTTGAGG
chr7	99003620	99003621	chr7:99003621:T:C	rs73161950	T	C	T	SOX2_HMG_3	-12	0	-	0	0	.
chr7	99052521	99052522	chr7:99052522:C:T	rs73145629	C	T	C	SOX2_HMG_3	27	0	-	0	0	.
chr7	99267581	99267582	chr7:99267582:A:G	rs10248906	A	G	A	SOX2_HMG_3	2	1	-	2.6533984173634253	-2.3499736529521607	GATCCATGACCTTGATT
chr7	99267589	99267590	chr7:99267590:C:T	rs1030828857	C	T	C	SOX2_HMG_3	-6	0	-	0	0	.
chr7	99453363	99453364	chr7:99453364:G:A	rs45441991	G	A	G	SOX2_HMG_3	-18	0	-	0	0	.
chr7	99573825	99573826	chr7:99573826:C:T	rs952319	C	T	T	SOX2_HMG_3	24	0	+	0	0	.
chr7	99849178	99849179	chr7:99849179:A:G	rs679320	A	G	A	SOX2_HMG_3	26	0	+	0	0	.
chr7	100691786	100691787	chr7:100691787:T:A	rs530244119	T	A	T	SOX2_HMG_3	-18	0	+	0	0	.
chr7	100723162	100723163	chr7:100723163:A:G	rs189775061	A	G	A	SOX2_HMG_3	21	0	-	0	0	.
chr7	101032694	101032695	chr7:101032695:G:A	rs56103274	G	A	-	SOX2_HMG_3	7	1	+	3.6313148107320514	0.9025276901707171	GACCACTGCTAGTGAAG
chr7	101037657	101037658	chr7:101037658:C:A	rs36120435	C	A	-	SOX2_HMG_3	17	0	+	0	0	.
chr7	101118670	101118671	chr7:101118671:T:C	rs112302062	T	C	T	SOX2_HMG_3	-20	0	-	0	0	.
chr7	101218927	101218928	chr7:101218928:C:G	rs10487887	C	G	C	SOX2_HMG_3	-6	0	+	0	0	.
chr7	101434773	101434774	chr7:101434774:G:C	rs13238748	G	C	G	SOX2_HMG_3	36	0	-	0	0	.
chr7	101467216	101467217	chr7:101467217:A:G	rs4729717	A	G	G	SOX2_HMG_3	15	1	-	1.8082626945124258	-1.0344464616644322	GGTCCATGTCTTTGATT
chr7	101593925	101593926	chr7:101593926:G:A	rs12113459	G	A	g	SOX2_HMG_3	-13	0	+	0	0	.
chr7	101898433	101898434	chr7:101898434:A:C	rs13229243	A	C	A	SOX2_HMG_3	19	0	-	0	0	.
chr7	102045551	102045552	chr7:102045552:G:A	rs392438	G	A	G	SOX2_HMG_3	7	1	+	2.466552642973576	-0.26223447758775986	AATAAATGCTTGTGATA
chr7	102071624	102071625	chr7:102071625:C:T	rs10234321	C	T	C	SOX2_HMG_3	-10	0	-	0	0	.
chr7	102106410	102106411	chr7:102106411:G:T	rs10271376	G	T	G	SOX2_HMG_3	22	0	-	0	0	.
chr7	102111976	102111977	chr7:102111977:A:G	rs980567029	A	G	A	SOX2_HMG_3	-10	0	-	0	0	.
chr7	102203617	102203618	chr7:102203618:A:G	rs6465852	A	G	G	SOX2_HMG_3	8	1	-	6.681915327053046	5.810178974417182	GTTCAATGTTATTAAGT
chr7	102390613	102390614	chr7:102390614:T:G	rs111820855	T	G	G	SOX2_HMG_3	-12	0	+	0	0	.
chr7	102748785	102748786	chr7:102748786:A:G	rs11983460	A	G	N	SOX2_HMG_3	-18	0	+	0	0	.
chr7	102748812	102748813	chr7:102748813:T:A	rs187269668	T	A	N	SOX2_HMG_3	9	1	+	3.0242601456174443	1.165684803670715	AGCCAATGGTCTTGAGA
chr7	102856146	102856147	chr7:102856147:G:T	rs2215040	G	T	T	SOX2_HMG_3	9	1	+	3.9818859660041626	10.421236337104261	TTTCAATTTGATTGTTG
chr7	103133772	103133773	chr7:103133773:T:C	rs79775118	T	C	t	SOX2_HMG_3	12	1	+	4.257292811211295	-2.6514619681039244	TAACAATGTAAATGAAA
chr7	103479415	103479416	chr7:103479416:T:C	rs3823992	T	C	T	SOX2_HMG_3	36	0	+	0	0	.
chr7	103614475	103614476	chr7:103614476:T:C	rs147883951	T	C	T	SOX2_HMG_3	28	0	+	0	0	.
chr7	103811525	103811526	chr7:103811526:T:C	rs575704640	T	C	t	SOX2_HMG_3	20	0	+	0	0	.
chr7	103826686	103826687	chr7:103826687:T:C	rs11977571	T	C	T	SOX2_HMG_3	15	1	+	14.23935169687048	11.396642540693621	AATCAATTCTAGTGATA
chr7	103831505	103831506	chr7:103831506:A:C	rs39362	A	C	C	SOX2_HMG_3	-17	0	+	0	0	.
chr7	103930318	103930319	chr7:103930319:C:T	rs6972635	C	T	C	SOX2_HMG_3	34	0	+	0	0	.
chr7	104151167	104151168	chr7:104151168:T:C	rs2299408	T	C	T	SOX2_HMG_3	11	1	+	9.028102129406102	2.335410631173757	AATAAATGCTATTGAAT
chr7	104267721	104267722	chr7:104267722:C:A	rs4729988	C	A	A	SOX2_HMG_3	13	1	-	8.223418059918675	1.3146632806034553	AGTCAATTGAATTGTAT
chr7	104664814	104664815	chr7:104664815:C:A	rs4513902	C	A	A	SOX2_HMG_3	17	0	-	0	0	.
chr7	104958000	104958001	chr7:104958001:T:C	rs6466030	T	C	C	SOX2_HMG_3	-14	0	-	0	0	.
chr7	105024548	105024549	chr7:105024549:T:G	chr7:105024549:T:G	T	G	T	SOX2_HMG_3	11	1	+	6.736197334791367	5.319117365571417	TATCAATTATATTAAAA
chr7	105654369	105654370	chr7:105654370:G:A	rs687596	G	A	G	SOX2_HMG_3	31	0	-	0	0	.
chr7	105879593	105879594	chr7:105879594:T:C	rs212432	T	C	T	SOX2_HMG_3	9	1	+	2.724090107487037	1.9174199735499904	CCTCAGTTATAGTGAAG
chr7	105996011	105996012	chr7:105996012:G:A	rs2072162	G	A	G	SOX2_HMG_3	-8	0	+	0	0	.
chr7	106157458	106157459	chr7:106157459:T:C	rs176526	T	C	C	SOX2_HMG_3	17	0	+	0	0	.
chr7	106204421	106204422	chr7:106204422:C:T	rs113740057	C	T	C	SOX2_HMG_3	-4	0	-	0	0	.
chr7	106380807	106380808	chr7:106380808:G:A	rs179883	G	A	A	SOX2_HMG_3	23	0	+	0	0	.
chr7	106781269	106781270	chr7:106781270:A:G	rs73186244	A	G	A	SOX2_HMG_3	4	1	+	6.982084049983508	0.07332927066828848	TTGCAATGTAATTGAGT
chr7	106998768	106998769	chr7:106998769:A:T	rs940936	A	T	A	SOX2_HMG_3	4	1	+	2.2944430427741054	-4.614311736541115	AGTCATTGGGATTGAAG
chr7	107469984	107469985	chr7:107469985:A:G	rs114071904	A	G	A	SOX2_HMG_3	-12	0	+	0	0	.
chr7	107507084	107507085	chr7:107507085:C:A	rs11974387	C	A	C	SOX2_HMG_3	34	0	+	0	0	.
chr7	107946025	107946026	chr7:107946026:T:C	rs73412519	T	C	C	SOX2_HMG_3	10	1	-	4.547119189396112	-2.3616355899191097	GACCAATGGTATAGAGT
chr7	108005811	108005812	chr7:108005812:C:A	rs56221161	C	A	A	SOX2_HMG_3	33	0	-	0	0	.
chr7	108099908	108099909	chr7:108099909:T:C	rs73197610	T	C	T	SOX2_HMG_3	23	0	-	0	0	.
chr7	108099951	108099952	chr7:108099952:C:G	rs73725332	C	G	C	SOX2_HMG_3	-20	0	-	0	0	.
chr7	108160507	108160508	chr7:108160508:A:G	rs12670313	A	G	A	SOX2_HMG_3	5	1	+	7.618465823369098	0.7097110440538772	AATCAATGGTGTTGGTG
chr7	108181951	108181952	chr7:108181952:G:A	rs2142325	G	A	G	SOX2_HMG_3	-15	0	+	0	0	.
chr7	108203503	108203504	chr7:108203504:A:G	rs10953560	A	G	A	SOX2_HMG_3	9	1	-	9.9730649577322	9.166394823795153	ATGCAATGTTATTGATC
chr7	108209277	108209278	chr7:108209278:T:C	rs11984362	T	C	T	SOX2_HMG_3	10	1	-	2.942664321009617	-3.9660904583056036	TCTCATTGCTATTGGTA
chr7	109231875	109231876	chr7:109231876:T:C	rs148784959	T	C	T	SOX2_HMG_3	1	1	-	4.21046521541308	2.3788176253337907	GATCAATGTGATTCAAA
chr7	109882581	109882582	chr7:109882582:T:C	rs1270808780	T	C	T	SOX2_HMG_3	-9	0	+	0	0	.
chr7	110076721	110076722	chr7:110076722:G:A	rs140432302	G	A	G	SOX2_HMG_3	0	1	+	4.435789433199721	4.215195154114427	GGTCACTGTCAGTGAGC
chr7	110187580	110187581	chr7:110187581:G:T	rs1722089	G	T	G	SOX2_HMG_3	17	0	+	0	0	.
chr7	110337771	110337772	chr7:110337772:A:G	rs10257748	A	G	G	SOX2_HMG_3	-4	0	-	0	0	.
chr7	110507687	110507688	chr7:110507688:A:C	rs10255144	A	C	A	SOX2_HMG_3	25	0	-	0	0	.
chr7	110539732	110539733	chr7:110539733:A:G	rs55735006	A	G	A	SOX2_HMG_3	5	1	+	10.818258625816975	3.9095038465017535	AATCAATGAAATTGTGT
chr7	111006434	111006435	chr7:111006435:G:T	rs56277540	G	T	G	SOX2_HMG_3	-5	0	-	0	0	.
chr7	111026574	111026575	chr7:111026575:G:A	rs17158262	G	A	G	SOX2_HMG_3	-11	0	+	0	0	.
chr7	111165022	111165023	chr7:111165023:T:G	rs189727432	T	G	T	SOX2_HMG_3	-12	0	-	0	0	.
chr7	111318616	111318617	chr7:111318617:T:C	rs112410769	T	C	T	SOX2_HMG_3	31	0	+	0	0	.
chr7	111486857	111486858	chr7:111486858:A:T	rs2396358	A	T	A	SOX2_HMG_3	-15	0	-	0	0	.
chr7	111711455	111711456	chr7:111711456:T:C	rs10487331	T	C	C	SOX2_HMG_3	-4	0	-	0	0	.
chr7	112112791	112112792	chr7:112112792:C:G	rs2560656	C	G	G	SOX2_HMG_3	13	1	-	2.644620606468938	-4.2641341728462825	AGCCAATGAGATTGAGA
chr7	112132459	112132460	chr7:112132460:T:C	rs78135136	T	C	T	SOX2_HMG_3	28	0	-	0	0	.
chr7	112291317	112291318	chr7:112291318:G:T	rs56675883	G	T	G	SOX2_HMG_3	16	1	+	6.259043975473375	5.455973533697184	TACCAATTACAGTGAGG
chr7	112356896	112356897	chr7:112356897:T:C	rs12113634	T	C	C	SOX2_HMG_3	-6	0	+	0	0	.
chr7	112449505	112449506	chr7:112449506:T:C	rs4463358	T	C	T	SOX2_HMG_3	5	1	-	2.6611931141750444	-4.247561665140176	CCTCAATGTAGGTGAGT
chr7	112449517	112449518	chr7:112449518:A:T	rs796840072	A	T	A	SOX2_HMG_3	-7	0	-	0	0	.
chr7	112624851	112624852	chr7:112624852:T:C	rs1234383	T	C	T	SOX2_HMG_3	18	0	+	0	0	.
chr7	113375276	113375277	chr7:113375277:T:G	rs13230022	T	G	T	SOX2_HMG_3	19	0	+	0	0	.
chr7	114152467	114152468	chr7:114152468:T:C	rs2244419	T	C	C	SOX2_HMG_3	-18	0	-	0	0	.
chr7	114484604	114484605	chr7:114484605:C:G	rs6974757	C	G	G	SOX2_HMG_3	-14	0	-	0	0	.
chr7	114660661	114660662	chr7:114660662:T:C	rs12154391	T	C	T	SOX2_HMG_3	30	0	+	0	0	.
chr7	114757189	114757190	chr7:114757190:T:C	rs7785574	T	C	T	SOX2_HMG_3	1	1	-	2.7708021959267635	0.939154605847472	GAGCCATGATAGTGACA
chr7	114790882	114790883	chr7:114790883:G:A	rs140055644	G	A	G	SOX2_HMG_3	19	0	+	0	0	.
chr7	114882142	114882143	chr7:114882143:T:G	rs4730652	T	G	G	SOX2_HMG_3	7	1	-	5.193394390602039	1.1893392997274013	GAGCAATACCAGTGGTG
chr7	115420167	115420168	chr7:115420168:G:T	rs7811355	G	T	G	SOX2_HMG_3	-16	0	-	0	0	.
chr7	115779829	115779830	chr7:115779830:T:C	rs76935609	T	C	T	SOX2_HMG_3	32	0	-	0	0	.
chr7	116119829	116119830	chr7:116119830:T:G	rs2402032	T	G	G	SOX2_HMG_3	-20	0	-	0	0	.
chr7	116180504	116180505	chr7:116180505:A:C	rs73454551	A	C	A	SOX2_HMG_3	-18	0	-	0	0	.
chr7	116224691	116224692	chr7:116224692:G:A	rs3779508	G	A	G	SOX2_HMG_3	19	0	+	0	0	.
chr7	116224695	116224696	chr7:116224696:T:C	rs146410097	T	C	T	SOX2_HMG_3	23	0	+	0	0	.
chr7	116404511	116404512	chr7:116404512:A:G	rs1918923	A	G	A	SOX2_HMG_3	-13	0	+	0	0	.
chr7	116547635	116547636	chr7:116547636:A:C	rs12668226	A	C	A	SOX2_HMG_3	20	0	-	0	0	.
chr7	116584780	116584781	chr7:116584781:A:G	rs6466590	A	G	A	SOX2_HMG_3	11	1	+	8.634430662866414	13.910042191878812	AATCAATGTCAATGTTG
chr7	116765332	116765333	chr7:116765333:T:C	rs2237717	T	C	C	SOX2_HMG_3	14	1	+	9.347309999098266	5.227785138345867	CATCAATGAAAGTGTTC
chr7	116782159	116782160	chr7:116782160:C:T	rs6966012	C	T	C	SOX2_HMG_3	-2	0	+	0	0	.
chr7	116838051	116838052	chr7:116838052:G:A	rs41774	G	A	G	SOX2_HMG_3	-15	0	-	0	0	.
chr7	117492864	117492865	chr7:117492865:A:G	rs11772396	A	G	a	SOX2_HMG_3	11	1	-	3.909856273743297	-2.78283522448905	CCTCAAATGCATTGAAA
chr7	117716118	117716119	chr7:117716119:A:T	rs148638862	A	T	A	SOX2_HMG_3	20	0	-	0	0	.
chr7	118452310	118452311	chr7:118452311:A:C	rs7808314	A	C	C	SOX2_HMG_3	32	0	+	0	0	.
chr7	118660335	118660336	chr7:118660336:C:T	rs925351	C	T	C	SOX2_HMG_3	0	1	+	3.8046404868320334	3.66731150878337	CGTCCATTTCAGTGAAA
chr7	118859208	118859209	chr7:118859209:A:G	rs13228009	A	G	A	SOX2_HMG_3	10	1	+	7.210974366718975	0.3022195874037543	TCTCAATTACAGTGTTG
chr7	119565686	119565687	chr7:119565687:G:A	rs73719951	G	A	A	SOX2_HMG_3	16	1	+	5.955074678348829	5.681387061958558	GGGCAATGGAATTGGAG
chr7	119565687	119565688	chr7:119565688:C:T	rs73719952	C	T	T	SOX2_HMG_3	17	0	+	0	0	.
chr7	120282609	120282610	chr7:120282610:A:G	rs184164946	A	G	A	SOX2_HMG_3	6	1	-	4.754121620746389	-2.1546331585688336	TTTCAATGTTATTTTTT
chr7	120869006	120869007	chr7:120869007:T:C	rs73427873	T	C	T	SOX2_HMG_3	11	1	+	4.190660991467476	-2.50203050676487	GATCAATCTTCTTGAAG
chr7	120990214	120990215	chr7:120990215:T:G	rs2721361	T	G	G	SOX2_HMG_3	16	1	-	2.858664927437972	1.1325100489116997	TATCAAAGTTTTTGAAA
chr7	120990245	120990246	chr7:120990246:C:G	rs12673175	C	G	C	SOX2_HMG_3	-15	0	-	0	0	.
chr7	121383506	121383507	chr7:121383507:A:G	rs12706338	A	G	A	SOX2_HMG_3	31	0	-	0	0	.
chr7	121514630	121514631	chr7:121514631:G:T	rs56070691	G	T	A	SOX2_HMG_3	-7	0	-	0	0	.
chr7	121515378	121515379	chr7:121515379:T:C	rs2030990	T	C	C	SOX2_HMG_3	-17	0	-	0	0	.
chr7	121594284	121594285	chr7:121594285:G:T	rs57135280	G	T	T	SOX2_HMG_3	-20	0	+	0	0	.
chr7	121716888	121716889	chr7:121716889:A:G	rs6466804	A	G	G	SOX2_HMG_3	33	0	-	0	0	.
chr7	122679471	122679472	chr7:122679472:G:A	rs77466975	G	A	A	SOX2_HMG_3	29	0	+	0	0	.
chr7	123327838	123327839	chr7:123327839:C:T	rs76406362	C	T	C	SOX2_HMG_3	22	0	-	0	0	.
chr7	123556663	123556664	chr7:123556664:T:C	rs73222282	T	C	t	SOX2_HMG_3	32	0	+	0	0	.
chr7	124208386	124208387	chr7:124208387:C:A	rs6974549	C	A	C	SOX2_HMG_3	3	1	+	7.54572390323081	0.6369691239155888	CAGCAATGTTATTCATG
chr7	124387169	124387170	chr7:124387170:C:T	rs77172457	C	T	C	SOX2_HMG_3	0	1	-	4.130034617951031	3.9094403388657373	GGTCAATGACAGGGTTA
chr7	124566409	124566410	chr7:124566410:A:G	rs140861262	A	G	A	SOX2_HMG_3	21	0	-	0	0	.
chr7	124911870	124911871	chr7:124911871:T:C	rs7794631	T	C	C	SOX2_HMG_3	5	1	-	5.312297386780761	-1.5964573925344594	ATTCAATGCCCTTGAGA
chr7	125396681	125396682	chr7:125396682:T:G	rs10256418	T	G	G	SOX2_HMG_3	29	0	-	0	0	.
chr7	125922136	125922137	chr7:125922137:T:C	rs9886176	T	C	t	SOX2_HMG_3	-7	0	+	0	0	.
chr7	126103951	126103952	chr7:126103952:G:C	rs71576263	G	C	G	SOX2_HMG_3	7	1	+	3.8383410730520384	-2.894501138383936	GAACATTGTCATTGACT
chr7	126436618	126436619	chr7:126436619:C:T	rs1419460	C	T	C	SOX2_HMG_3	10	1	-	2.430549173573561	9.339303952888782	GGACAATGGCGGTGAGG
chr7	126450454	126450455	chr7:126450455:C:T	rs13247338	C	T	C	SOX2_HMG_3	35	0	-	0	0	.
chr7	127245664	127245665	chr7:127245665:A:G	rs17862333	A	G	A	SOX2_HMG_3	-7	0	+	0	0	.
chr7	127704625	127704626	chr7:127704626:G:A	rs1881084	G	A	G	SOX2_HMG_3	-2	0	+	0	0	.
chr7	127779182	127779183	chr7:127779183:A:G	rs6968199	A	G	A	SOX2_HMG_3	5	1	+	4.910746486177818	-1.998008293137403	CGTGAATGGTAGTGACA
chr7	128066628	128066629	chr7:128066629:G:T	rs3757755	G	T	G	SOX2_HMG_3	13	1	+	5.300699740120376	-1.6080550391948445	TATTAATTGCATTGTTA
chr7	128066633	128066634	chr7:128066634:T:C	rs3757754	T	C	C	SOX2_HMG_3	18	0	+	0	0	.
chr7	128099668	128099669	chr7:128099669:G:T	rs6954161	G	T	T	SOX2_HMG_3	-10	0	+	0	0	.
chr7	128109085	128109086	chr7:128109086:A:T	rs74930402	A	T	A	SOX2_HMG_3	21	0	+	0	0	.
chr7	128353606	128353607	chr7:128353607:C:G	rs7810319	C	G	C	SOX2_HMG_3	27	0	+	0	0	.
chr7	128459126	128459127	chr7:128459127:A:G	rs2562729	A	G	a	SOX2_HMG_3	34	0	-	0	0	.
chr7	128634183	128634184	chr7:128634184:G:A	rs9768325	G	A	.	SOX2_HMG_3	11	1	+	4.399664683517514	-0.8759468454948829	GAGCAAAGTCAGTGAGG
chr7	128863017	128863018	chr7:128863018:G:T	rs112994393	G	T	G	SOX2_HMG_3	-18	0	+	0	0	.
chr7	128878636	128878637	chr7:128878637:T:A	rs191095949	T	A	T	SOX2_HMG_3	11	1	+	3.5458342915732097	-3.1468572066591363	GGGCAAAGCCATTGAAG
chr7	129456692	129456693	chr7:129456693:A:G	rs753336	A	G	A	SOX2_HMG_3	36	0	+	0	0	.
chr7	129559486	129559487	chr7:129559487:G:A	rs10245560	G	A	G	SOX2_HMG_3	8	1	+	4.9734788016618845	4.124434854298255	GTTCAATGGCATTAAAC
chr7	129753321	129753322	chr7:129753322:G:T	rs11763880	G	T	G	SOX2_HMG_3	-4	0	+	0	0	.
chr7	129865225	129865226	chr7:129865226:T:G	rs527712450	T	G	T	SOX2_HMG_3	27	0	-	0	0	.
chr7	129970098	129970099	chr7:129970099:G:A	rs1480483207	G	A	g	SOX2_HMG_3	35	0	-	0	0	.
chr7	130075200	130075201	chr7:130075201:G:T	rs72607759	G	T	G	SOX2_HMG_3	16	1	+	2.795723934783827	1.9926534930076372	GGGCAATGGAATTCAGG
chr7	130207397	130207398	chr7:130207398:A:G	rs1994468	A	G	A	SOX2_HMG_3	5	1	+	4.779363548467589	-2.1293912308476313	TACCAATTGTATTGGAT
chr7	130334359	130334360	chr7:130334360:C:T	rs7798773	C	T	C	SOX2_HMG_3	20	0	-	0	0	.
chr7	130336627	130336628	chr7:130336628:C:T	rs6467303	C	T	C	SOX2_HMG_3	35	0	+	0	0	.
chr7	130898801	130898802	chr7:130898802:C:T	rs117291308	C	T	C	SOX2_HMG_3	32	0	-	0	0	.
chr7	130904639	130904640	chr7:130904640:C:T	rs147046488	C	T	C	SOX2_HMG_3	27	0	+	0	0	.
chr7	130904640	130904641	chr7:130904641:G:A	rs2278747	G	A	G	SOX2_HMG_3	28	0	+	0	0	.
chr7	131182879	131182880	chr7:131182880:T:C	rs2250234	T	C	C	SOX2_HMG_3	26	0	-	0	0	.
chr7	131182884	131182885	chr7:131182885:G:T	rs2250235	G	T	G	SOX2_HMG_3	21	0	-	0	0	.
chr7	131182922	131182923	chr7:131182923:G:T	rs326226	G	T	G	SOX2_HMG_3	-17	0	-	0	0	.
chr7	131210889	131210890	chr7:131210890:C:T	rs62471969	C	T	T	SOX2_HMG_3	-19	0	-	0	0	.
chr7	131509495	131509496	chr7:131509496:G:C	rs35893129	G	C	G	SOX2_HMG_3	-10	0	-	0	0	.
chr7	132081123	132081124	chr7:132081124:C:T	rs10249435	C	T	c	SOX2_HMG_3	-15	0	+	0	0	.
chr7	132099499	132099500	chr7:132099500:A:G	rs281883	A	G	G	SOX2_HMG_3	-13	0	-	0	0	.
chr7	132182073	132182074	chr7:132182074:A:G	rs3734984	A	G	A	SOX2_HMG_3	29	0	-	0	0	.
chr7	132393919	132393920	chr7:132393920:G:T	rs116954928	G	T	G	SOX2_HMG_3	-19	0	+	0	0	.
chr7	132454146	132454147	chr7:132454147:A:G	rs156940	A	G	A	SOX2_HMG_3	26	0	+	0	0	.
chr7	132508796	132508797	chr7:132508797:A:T	rs156963	A	T	T	SOX2_HMG_3	-11	0	+	0	0	.
chr7	132591090	132591091	chr7:132591091:A:C	rs7806862	A	C	A	SOX2_HMG_3	35	0	-	0	0	.
chr7	132682627	132682628	chr7:132682628:T:C	rs924371	T	C	C	SOX2_HMG_3	28	0	+	0	0	.
chr7	132878703	132878704	chr7:132878704:C:T	rs114971135	C	T	C	SOX2_HMG_3	11	1	-	3.9377024190340757	-1.3379091099783231	CATAAATGCCAGTGTGG
chr7	133184188	133184189	chr7:133184189:C:T	rs4236642	C	T	-	SOX2_HMG_3	16	1	-	3.038904589224353	2.7652169728340814	GAGAAATGCTATTGTGG
chr7	133510665	133510666	chr7:133510666:G:A	rs6966473	G	A	G	SOX2_HMG_3	22	0	+	0	0	.
chr7	133753378	133753379	chr7:133753379:A:G	rs35531336	A	G	A	SOX2_HMG_3	-11	0	-	0	0	.
chr7	133853184	133853185	chr7:133853185:G:C	rs79238907	G	C	G	SOX2_HMG_3	28	0	+	0	0	.
chr7	133908423	133908424	chr7:133908424:A:G	rs12707129	A	G	G	SOX2_HMG_3	-3	0	+	0	0	.
chr7	133946248	133946249	chr7:133946249:C:T	rs62470446	C	T	c	SOX2_HMG_3	29	0	-	0	0	.
chr7	134104434	134104435	chr7:134104435:C:T	rs11982121	C	T	-	SOX2_HMG_3	7	1	-	4.4220388749056285	1.6932517543442938	AAGCAATGAAATAGATT
chr7	134372085	134372086	chr7:134372086:C:T	rs13244962	C	T	C	SOX2_HMG_3	-14	0	-	0	0	.
chr7	134591136	134591137	chr7:134591137:T:C	rs73437904	T	C	T	SOX2_HMG_3	-2	0	-	0	0	.
chr7	134601462	134601463	chr7:134601463:C:G	rs7796491	C	G	G	SOX2_HMG_3	33	0	+	0	0	.
chr7	135224331	135224332	chr7:135224332:G:T	rs292622	G	T	G	SOX2_HMG_3	29	0	-	0	0	.
chr7	135720092	135720093	chr7:135720093:C:T	rs3112362	C	T	c	SOX2_HMG_3	36	0	+	0	0	.
chr7	135721581	135721582	chr7:135721582:G:A	rs111545354	G	A	G	SOX2_HMG_3	-5	0	-	0	0	.
chr7	135762602	135762603	chr7:135762603:G:A	rs59538271	G	A	G	SOX2_HMG_3	19	0	+	0	0	.
chr7	135799877	135799878	chr7:135799878:A:G	rs62491564	A	G	A	SOX2_HMG_3	1	1	+	5.196443474431305	3.3647958843520143	AATCAAGGGCAGTGTGG
chr7	135978128	135978129	chr7:135978129:T:C	rs116077446	T	C	C	SOX2_HMG_3	20	0	-	0	0	.
chr7	135980464	135980465	chr7:135980465:G:A	rs116669115	G	A	G	SOX2_HMG_3	26	0	+	0	0	.
chr7	136086453	136086454	chr7:136086454:G:A	rs879435933	G	A	G	SOX2_HMG_3	30	0	-	0	0	.
chr7	136117641	136117642	chr7:136117642:C:G	rs36070085	C	G	C	SOX2_HMG_3	3	1	+	6.80377879449243	-0.10497598482278958	TCTCAATTCCAGTGAAC
chr7	136117668	136117669	chr7:136117669:C:T	rs35239688	C	T	C	SOX2_HMG_3	30	0	+	0	0	.
chr7	136533973	136533974	chr7:136533974:G:A	rs115951625	G	A	G	SOX2_HMG_3	33	0	-	0	0	.
chr7	136969911	136969912	chr7:136969912:C:T	rs324592	C	T	C	SOX2_HMG_3	-16	0	-	0	0	.
chr7	137100527	137100528	chr7:137100528:C:T	rs73727805	C	T	c	SOX2_HMG_3	-11	0	+	0	0	.
chr7	137246080	137246081	chr7:137246081:T:G	rs322303	T	G	C	SOX2_HMG_3	29	0	+	0	0	.
chr7	137813753	137813754	chr7:137813754:A:G	rs60644777	A	G	A	SOX2_HMG_3	-13	0	+	0	0	.
chr7	138096690	138096691	chr7:138096691:C:A	rs73155744	C	A	C	SOX2_HMG_3	-2	0	-	0	0	.
chr7	138226608	138226609	chr7:138226609:C:G	rs2718118	C	G	.	SOX2_HMG_3	-17	0	+	0	0	.
chr7	138593677	138593678	chr7:138593678:C:A	rs78948225	C	A	C	SOX2_HMG_3	11	1	+	4.169191487574584	4.169191487574584	GTTCAATATTACTGAGT
chr7	138754102	138754103	chr7:138754103:T:C	rs411467	T	C	C	SOX2_HMG_3	12	1	+	1.6139031960150843	-5.294851583300135	CTTCAATGGCTTTGGGG
chr7	139079313	139079314	chr7:139079314:G:A	rs2236424	G	A	G	SOX2_HMG_3	35	0	-	0	0	.
chr7	139092060	139092061	chr7:139092061:C:T	rs10248093	C	T	T	SOX2_HMG_3	22	0	+	0	0	.
chr7	139431286	139431287	chr7:139431287:T:C	rs79531747	T	C	T	SOX2_HMG_3	23	0	+	0	0	.
chr7	139540674	139540675	chr7:139540675:C:A	rs35786058	C	A	C	SOX2_HMG_3	21	0	-	0	0	.
chr7	139725002	139725003	chr7:139725003:G:A	rs59843351	G	A	G	SOX2_HMG_3	-11	0	-	0	0	.
chr7	139736751	139736752	chr7:139736752:G:T	rs11770283	G	T	G	SOX2_HMG_3	19	0	-	0	0	.
chr7	139981723	139981724	chr7:139981724:T:C	rs2299899	T	C	T	SOX2_HMG_3	4	1	-	3.7038408987608973	-3.2049138805543214	GAACAATCCCAGTGAGG
chr7	140310902	140310903	chr7:140310903:G:A	rs4726766	G	A	G	SOX2_HMG_3	-6	0	-	0	0	.
chr7	140376303	140376304	chr7:140376304:T:A	rs4368896	T	A	A	SOX2_HMG_3	4	1	-	12.21308412305279	5.304329343737568	GAGCAATGTTATTGTTA
chr7	140558396	140558397	chr7:140558397:A:G	rs538368550	A	G	A	SOX2_HMG_3	3	1	+	5.9413500326407	5.9413500326407	AGTAAATGTCAGTGAGA
chr7	140609855	140609856	chr7:140609856:G:T	rs7810002	G	T	G	SOX2_HMG_3	-10	0	+	0	0	.
chr7	140763507	140763508	chr7:140763508:C:G	rs111947383	C	G	C	SOX2_HMG_3	31	0	-	0	0	.
chr7	141228141	141228142	chr7:141228142:T:C	rs6951501	T	C	T	SOX2_HMG_3	-5	0	+	0	0	.
chr7	141317842	141317843	chr7:141317843:G:T	rs2366081	G	T	T	SOX2_HMG_3	8	1	+	6.087787482738673	6.225255402603334	TCTCAATTGTTTTGATG
chr7	141838940	141838941	chr7:141838941:T:C	rs73171695	T	C	T	SOX2_HMG_3	5	1	-	2.398477853732193	-4.510276925583027	GGTCAATTGAGGTGAGT
chr7	142136068	142136069	chr7:142136069:A:G	rs6944985	A	G	G	SOX2_HMG_3	-17	0	-	0	0	.
chr7	142754430	142754431	chr7:142754431:G:T	rs201188438	G	T	G	SOX2_HMG_3	18	0	+	0	0	.
chr7	142760626	142760627	chr7:142760627:A:C	rs369005346	A	C	a	SOX2_HMG_3	29	0	-	0	0	.
chr7	142775921	142775922	chr7:142775922:C:T	rs111224809	C	T	C	SOX2_HMG_3	36	0	+	0	0	.
chr7	142941609	142941610	chr7:142941610:T:C	rs6949788	T	C	T	SOX2_HMG_3	-10	0	+	0	0	.
chr7	142965404	142965405	chr7:142965405:C:T	rs7793035	C	T	T	SOX2_HMG_3	3	1	+	4.2521513638660995	-2.656603415449122	ACTCGATTGCAGTGATA
chr7	143043654	143043655	chr7:143043655:T:C	rs10265709	T	C	C	SOX2_HMG_3	20	0	-	0	0	.
chr7	143158299	143158300	chr7:143158300:G:A	rs28855384	G	A	G	SOX2_HMG_3	-9	0	-	0	0	.
chr7	143936063	143936064	chr7:143936064:T:C	rs13235235	T	C	.	SOX2_HMG_3	12	1	-	5.229354434663714	5.229354434663714	TAACAATGGCATAGAAG
chr7	144406821	144406822	chr7:144406822:G:T	rs1208173	G	T	T	SOX2_HMG_3	-19	0	+	0	0	.
chr7	144602260	144602261	chr7:144602261:A:C	rs182431482	A	C	A	SOX2_HMG_3	-5	0	+	0	0	.
chr7	144665768	144665769	chr7:144665769:A:C	rs6942497	A	C	C	SOX2_HMG_3	5	1	+	11.619551851470925	4.710797072155706	GCTCAATGATAGTGAAT
chr7	144762964	144762965	chr7:144762965:C:T	rs56023249	C	T	t	SOX2_HMG_3	1	1	-	3.3529972319458596	5.184644822025151	TGACAATGTCAGTTATG
chr7	144924204	144924205	chr7:144924205:C:G	rs2699464	C	G	C	SOX2_HMG_3	30	0	-	0	0	.
chr7	145019171	145019172	chr7:145019172:C:T	rs6464638	C	T	C	SOX2_HMG_3	-10	0	+	0	0	.
chr7	145355125	145355126	chr7:145355126:T:C	rs41684	T	C	T	SOX2_HMG_3	-2	0	-	0	0	.
chr7	145664933	145664934	chr7:145664934:A:T	rs2191275	A	T	T	SOX2_HMG_3	32	0	-	0	0	.
chr7	145845981	145845982	chr7:145845982:T:C	rs6975640	T	C	T	SOX2_HMG_3	-10	0	-	0	0	.
chr7	146788090	146788091	chr7:146788091:T:C	rs1860846	T	C	T	SOX2_HMG_3	-10	0	-	0	0	.
chr7	146805344	146805345	chr7:146805345:G:C	chr7:146805345:G:C	G	C	G	SOX2_HMG_3	17	0	-	0	0	.
chr7	146949257	146949258	chr7:146949258:T:C	rs33954628	T	C	T	SOX2_HMG_3	11	1	+	3.4841478130637302	-3.2085436851686175	GATAAATGAAATTGTCA
chr7	146954367	146954368	chr7:146954368:A:C	rs13221567	A	C	A	SOX2_HMG_3	34	0	+	0	0	.
chr7	147337362	147337363	chr7:147337363:C:G	rs35444249	C	G	C	SOX2_HMG_3	19	0	+	0	0	.
chr7	147340035	147340036	chr7:147340036:T:C	rs899619	T	C	C	SOX2_HMG_3	5	1	-	5.197460392222464	-1.711294387092757	GTCCAATGCCATTGGTG
chr7	147413468	147413469	chr7:147413469:T:C	rs13242678	T	C	T	SOX2_HMG_3	35	0	-	0	0	.
chr7	147639254	147639255	chr7:147639255:G:C	rs372580822	G	C	G	SOX2_HMG_3	-9	0	-	0	0	.
chr7	148353053	148353054	chr7:148353054:A:G	rs1730433	A	G	A	SOX2_HMG_3	-6	0	+	0	0	.
chr7	148482796	148482797	chr7:148482797:G:A	rs62506980	G	A	G	SOX2_HMG_3	23	0	-	0	0	.
chr7	148624781	148624782	chr7:148624782:G:A	rs530686524	G	A	G	SOX2_HMG_3	18	0	+	0	0	.
chr7	149206504	149206505	chr7:149206505:G:A	rs13221837	G	A	G	SOX2_HMG_3	5	1	+	2.9959939054866362	9.904748684801856	CATCCGTGTTATTGAAA
chr7	149321663	149321664	chr7:149321664:G:A	rs2003500	G	A	A	SOX2_HMG_3	9	1	-	1.6547552868896476	2.4614254208266937	CAGCACTGTCAGTGAGC
chr7	149450191	149450192	chr7:149450192:A:G	rs4727070	A	G	G	SOX2_HMG_3	26	0	+	0	0	.
chr7	149647929	149647930	chr7:149647930:G:T	rs9791856	G	T	T	SOX2_HMG_3	-15	0	+	0	0	.
chr7	149886080	149886081	chr7:149886081:C:T	rs10807976	C	T	.	SOX2_HMG_3	-9	0	+	0	0	.
chr7	149933914	149933915	chr7:149933915:G:T	rs7791831	G	T	.	SOX2_HMG_3	-12	0	-	0	0	.
chr7	150169545	150169546	chr7:150169546:C:T	rs182405332	C	T	C	SOX2_HMG_3	-18	0	+	0	0	.
chr7	150503926	150503927	chr7:150503927:G:T	rs79885761	G	T	T	SOX2_HMG_3	-10	0	+	0	0	.
chr7	150561334	150561335	chr7:150561335:A:C	rs1879865	A	C	C	SOX2_HMG_3	21	0	+	0	0	.
chr7	150715202	150715203	chr7:150715203:C:G	rs1558479	C	G	C	SOX2_HMG_3	15	1	-	8.046685239110262	6.871352101201026	AATCAATGTCAGTTAGG
chr7	150715228	150715229	chr7:150715229:C:T	rs10488372	C	T	C	SOX2_HMG_3	-11	0	-	0	0	.
chr7	150780820	150780821	chr7:150780821:G:A	rs6464100	G	A	A	SOX2_HMG_3	16	1	+	3.2165251609387036	2.942837544548432	GTTCAAGTTCAGTGAGG
chr7	150791527	150791528	chr7:150791528:A:G	rs2302479	A	G	G	SOX2_HMG_3	-8	0	+	0	0	.
chr7	150824007	150824008	chr7:150824008:A:G	rs7787744	A	G	G	SOX2_HMG_3	-9	0	-	0	0	.
chr7	151155060	151155061	chr7:151155061:C:T	rs74473708	C	T	C	SOX2_HMG_3	-7	0	+	0	0	.
chr7	151214933	151214934	chr7:151214934:T:C	rs55866446	T	C	T	SOX2_HMG_3	5	1	-	2.3201004813128385	-4.588654298002382	CATCAATGAGTTTGAGG
chr7	151690862	151690863	chr7:151690863:G:A	rs1358403293	G	A	-	SOX2_HMG_3	-15	0	+	0	0	.
chr7	151690877	151690878	chr7:151690878:C:T	rs2024266	C	T	-	SOX2_HMG_3	0	1	+	4.750026664764088	4.612697686715425	CGTGAATGGCAGTGAGT
chr7	151709253	151709254	chr7:151709254:A:C	rs12672354	A	C	-	SOX2_HMG_3	-17	0	-	0	0	.
chr7	151709689	151709690	chr7:151709690:A:G	rs533723387	A	G	-	SOX2_HMG_3	21	0	-	0	0	.
chr7	151709701	151709702	chr7:151709702:G:A	rs56012466	G	A	-	SOX2_HMG_3	9	1	-	4.234150605419335	5.040820739356381	TGTCAGTGTCAGTGTTA
chr7	151776424	151776425	chr7:151776425:T:C	rs7792110	T	C	C	SOX2_HMG_3	11	1	+	3.244553251662539	-3.448138246569808	TACCAAGGACATTGAAG
chr7	151813563	151813564	chr7:151813564:T:C	rs7800856	T	C	c	SOX2_HMG_3	31	0	+	0	0	.
chr7	151821491	151821492	chr7:151821492:G:A	rs59048436	G	A	G	SOX2_HMG_3	8	1	-	4.199941398390277	5.07167775102614	CAGCAGTGCCATTGAGG
chr7	151844836	151844837	chr7:151844837:A:G	rs77913872	A	G	A	SOX2_HMG_3	-9	0	+	0	0	.
chr7	151896050	151896051	chr7:151896051:T:C	rs10952326	T	C	T	SOX2_HMG_3	8	1	-	5.004803088733905	5.853847036097534	TAGCAAGGATAGTGATG
chr7	151901209	151901210	chr7:151901210:C:T	rs75793218	C	T	C	SOX2_HMG_3	34	0	+	0	0	.
chr7	151916352	151916353	chr7:151916353:G:A	rs11973357	G	A	G	SOX2_HMG_3	34	0	-	0	0	.
chr7	151931774	151931775	chr7:151931775:C:T	rs6948413	C	T	T	SOX2_HMG_3	32	0	+	0	0	.
chr7	152071108	152071109	chr7:152071109:G:A	rs112043662	G	A	G	SOX2_HMG_3	24	0	-	0	0	.
chr7	152581302	152581303	chr7:152581303:A:G	chr7:152581303:A:G	A	G	A	SOX2_HMG_3	-4	0	-	0	0	.
chr7	152617285	152617286	chr7:152617286:G:C	rs115955653	G	C	G	SOX2_HMG_3	36	0	+	0	0	.
chr7	153070375	153070376	chr7:153070376:A:G	rs6958881	A	G	A	SOX2_HMG_3	1	1	+	9.893100855801343	8.061453265722053	AATCAAGTTTATTGATG
chr7	153081644	153081645	chr7:153081645:A:G	rs10952385	A	G	A	SOX2_HMG_3	-12	0	+	0	0	.
chr7	153382893	153382894	chr7:153382894:A:G	rs115186412	A	G	A	SOX2_HMG_3	14	1	-	4.185407928317208	0.06588306756480838	CATAAATTTTATTGTGT
chr7	154505401	154505402	chr7:154505402:G:A	rs10952489	G	A	A	SOX2_HMG_3	29	0	+	0	0	.
chr7	154594062	154594063	chr7:154594063:T:C	rs6964189	T	C	C	SOX2_HMG_3	23	0	-	0	0	.
chr7	154764335	154764336	chr7:154764336:A:C	rs7789315	A	C	C	SOX2_HMG_3	21	0	+	0	0	.
chr7	154778139	154778140	chr7:154778140:G:A	rs34259212	G	A	A	SOX2_HMG_3	-12	0	+	0	0	.
chr7	154791793	154791794	chr7:154791794:T:C	rs73500233	T	C	T	SOX2_HMG_3	5	1	-	3.2069368217587284	-3.701817957556492	CATCAACAGCAGTGACA
chr7	154832199	154832200	chr7:154832200:A:G	rs1464913	A	G	G	SOX2_HMG_3	-1	0	+	0	0	.
chr7	154832222	154832223	chr7:154832223:G:T	rs76880781	G	T	G	SOX2_HMG_3	22	0	+	0	0	.
chr7	154953350	154953351	chr7:154953351:A:C	rs6960009	A	C	A	SOX2_HMG_3	26	0	-	0	0	.
chr7	155211036	155211037	chr7:155211037:T:C	rs11766971	T	C	C	SOX2_HMG_3	-11	0	-	0	0	.
chr7	155211044	155211045	chr7:155211045:C:T	rs75003816	C	T	C	SOX2_HMG_3	-19	0	-	0	0	.
chr7	155287023	155287024	chr7:155287024:G:A	rs9801301	G	A	A	SOX2_HMG_3	1	1	+	6.7315883249666015	8.563235915045892	TGTCCATGTTATTGTTG
chr7	155390092	155390093	chr7:155390093:C:G	rs9647682	C	G	C	SOX2_HMG_3	3	1	+	5.153707117595499	-1.755047661719721	CATCAATGTTGGTGACC
chr7	155390105	155390106	chr7:155390106:C:T	rs12534900	C	T	T	SOX2_HMG_3	16	1	+	5.153707117595499	6.350479170735853	CATCAATGTTGGTGACC
chr7	155476532	155476533	chr7:155476533:G:A	rs73163355	G	A	G	SOX2_HMG_3	32	0	+	0	0	.
chr7	155784580	155784581	chr7:155784581:C:T	rs2158813	C	T	T	SOX2_HMG_3	30	0	-	0	0	.
chr7	155861958	155861959	chr7:155861959:G:T	rs112243181	G	T	G	SOX2_HMG_3	9	1	-	2.5019170917100118	1.450011883700329	GATCATTGTCTTTGAGA
chr7	155887899	155887900	chr7:155887900:G:A	rs73169181	G	A	G	SOX2_HMG_3	-8	0	+	0	0	.
chr7	155888825	155888826	chr7:155888826:G:C	rs12698334	G	C	C	SOX2_HMG_3	-16	0	+	0	0	.
chr7	155959877	155959878	chr7:155959878:C:T	rs58305374	C	T	C	SOX2_HMG_3	29	0	-	0	0	.
chr7	155959912	155959913	chr7:155959913:C:T	rs114238205	C	T	C	SOX2_HMG_3	-6	0	-	0	0	.
chr7	156000092	156000093	chr7:156000093:C:T	rs62480441	C	T	C	SOX2_HMG_3	28	0	-	0	0	.
chr7	156000111	156000112	chr7:156000112:C:T	rs115730087	C	T	C	SOX2_HMG_3	9	1	-	4.340258704904898	8.921033734058268	CACCAATGCGATTGAGG
chr7	156027466	156027467	chr7:156027467:A:G	rs10255199	A	G	A	SOX2_HMG_3	-20	0	-	0	0	.
chr7	156206773	156206774	chr7:156206774:T:C	rs542621808	T	C	T	SOX2_HMG_3	9	1	+	6.330470049347399	5.523799915410354	GATCAATGGTATTTGAA
chr7	156223531	156223532	chr7:156223532:T:C	rs1922086	T	C	T	SOX2_HMG_3	18	0	+	0	0	.
chr7	156237322	156237323	chr7:156237323:C:T	rs73739624	C	T	C	SOX2_HMG_3	-12	0	-	0	0	.
chr7	156356807	156356808	chr7:156356808:C:G	rs7798044	C	G	C	SOX2_HMG_3	34	0	-	0	0	.
chr7	156365151	156365152	chr7:156365152:G:T	rs57884462	G	T	G	SOX2_HMG_3	-8	0	-	0	0	.
chr7	156368169	156368170	chr7:156368170:C:T	rs34977094	C	T	C	SOX2_HMG_3	27	0	-	0	0	.
chr7	156368188	156368189	chr7:156368189:T:C	rs34810003	T	C	T	SOX2_HMG_3	8	1	-	6.427459197523062	7.276503144886691	TGGCAATTACAGTGATT
chr7	156368202	156368203	chr7:156368203:T:G	rs34245976	T	G	T	SOX2_HMG_3	-6	0	-	0	0	.
chr7	156457120	156457121	chr7:156457121:C:T	rs12697963	C	T	T	SOX2_HMG_3	-2	0	-	0	0	.
chr7	156527543	156527544	chr7:156527544:G:C	rs1527577	G	C	G	SOX2_HMG_3	-6	0	+	0	0	.
chr7	156924478	156924479	chr7:156924479:G:A	rs10949614	G	A	A	SOX2_HMG_3	-19	0	+	0	0	.
chr7	157151765	157151766	chr7:157151766:A:G	rs3808317	A	G	G	SOX2_HMG_3	-3	0	+	0	0	.
chr7	157267133	157267134	chr7:157267134:C:A	rs4262225	C	A	C	SOX2_HMG_3	24	0	+	0	0	.
chr7	157344699	157344700	chr7:157344700:C:G	rs73497154	C	G	c	SOX2_HMG_3	1	1	-	5.876283813941883	4.701887551497858	AGTCGATGCTAGTGAGA
chr7	157403351	157403352	chr7:157403352:A:G	rs945120849	A	G	A	SOX2_HMG_3	23	0	-	0	0	.
chr7	157403360	157403361	chr7:157403361:C:T	rs140733337	C	T	C	SOX2_HMG_3	14	1	-	2.845129462326695	7.027007079627813	TGGCAATGTCAGTGGAC
chr7	157484727	157484728	chr7:157484728:G:T	rs77676146	G	T	G	SOX2_HMG_3	31	0	-	0	0	.
chr7	157493774	157493775	chr7:157493775:A:G	rs73744951	A	G	G	SOX2_HMG_3	-6	0	-	0	0	.
chr7	157701771	157701772	chr7:157701772:C:G	rs13228663	C	G	C	SOX2_HMG_3	23	0	+	0	0	.
chr7	157753113	157753114	chr7:157753114:A:G	rs531785070	A	G	A	SOX2_HMG_3	4	1	+	2.013978807760833	-4.894775971554388	GGGCAAGGACAGTGAAG
chr7	157759674	157759675	chr7:157759675:G:C	rs1638756	G	C	C	SOX2_HMG_3	13	1	+	5.158368565011472	-1.7503862143037492	GGTCAATGATGTTGGTG
chr7	158157261	158157262	chr7:158157262:A:G	rs2335484	A	G	G	SOX2_HMG_3	8	1	+	1.581505226209932	2.430549173573561	GGGCAGTGACAGTGAGG
chr7	158246296	158246297	chr7:158246297:C:T	rs10235911	C	T	C	SOX2_HMG_3	20	0	+	0	0	.
chr7	158320697	158320698	chr7:158320698:T:G	rs896779	T	G	T	SOX2_HMG_3	4	1	-	5.910174540307498	-0.9985802390077223	GATGAATATCATTGTTG
chr7	158350493	158350494	chr7:158350494:T:C	rs4909195	T	C	C	SOX2_HMG_3	-12	0	+	0	0	.
chr7	158479212	158479213	chr7:158479213:T:G	rs149878773	T	G	T	SOX2_HMG_3	-1	0	+	0	0	.
chr7	158595967	158595968	chr7:158595968:A:C	rs1921303	A	C	C	SOX2_HMG_3	24	0	-	0	0	.
chr7	158684317	158684318	chr7:158684318:T:C	rs7794321	T	C	T	SOX2_HMG_3	21	0	-	0	0	.
chr7	158684333	158684334	chr7:158684334:T:A	rs4909260	T	A	T	SOX2_HMG_3	5	1	-	2.9611304840937223	-3.947624295221499	AATCTATGCCATTGGCA
chr7	158705498	158705499	chr7:158705499:G:T	rs77953019	G	T	G	SOX2_HMG_3	-6	0	+	0	0	.
chr7	158719830	158719831	chr7:158719831:A:G	rs12698276	A	G	A	SOX2_HMG_3	-3	0	+	0	0	.
chr7	158823660	158823661	chr7:158823661:A:G	rs1320879475	A	G	A	SOX2_HMG_3	18	0	+	0	0	.
chr7	158830536	158830537	chr7:158830537:A:G	rs28498939	A	G	A	SOX2_HMG_3	14	1	-	4.3592263433837415	0.23970148263134322	GATCAATAGTTGTGTTT
chr7	159091613	159091614	chr7:159091614:C:A	rs73169239	C	A	C	SOX2_HMG_3	-13	0	+	0	0	.
chr8	339568	339569	chr8:339569:T:G	rs78661643	T	G	.	SOX2_HMG_3	4	1	-	4.029879616640325	-2.878875162674895	CAGCACTGTTATTGTTT
chr8	343367	343368	chr8:343368:A:T	rs6983362	A	T	.	SOX2_HMG_3	6	1	-	6.712854284872632	-0.1959004944425884	GGCCAATGTCATTGTTC
chr8	394542	394543	chr8:394543:T:C	rs935563	T	C	.	SOX2_HMG_3	-14	0	-	0	0	.
chr8	422380	422381	chr8:422381:T:C	rs114468516	T	C	.	SOX2_HMG_3	-3	0	-	0	0	.
chr8	600390	600391	chr8:600391:A:G	rs7013024	A	G	A	SOX2_HMG_3	23	0	+	0	0	.
chr8	615515	615516	chr8:615516:G:A	rs145066056	G	A	G	SOX2_HMG_3	-9	0	+	0	0	.
chr8	759031	759032	chr8:759032:C:T	rs74775952	C	T	c	SOX2_HMG_3	-3	0	-	0	0	.
chr8	801822	801823	chr8:801823:T:C	rs4735931	T	C	C	SOX2_HMG_3	10	1	-	2.262354268736309	-4.6464005105789115	GAGCAAGGGCAGTGAGC
chr8	801838	801839	chr8:801839:C:T	rs4735932	C	T	C	SOX2_HMG_3	-6	0	-	0	0	.
chr8	909981	909982	chr8:909982:T:G	rs955980	T	G	T	SOX2_HMG_3	-4	0	+	0	0	.
chr8	1029413	1029414	chr8:1029414:G:A	rs75904052	G	A	G	SOX2_HMG_3	-13	0	+	0	0	.
chr8	1029424	1029425	chr8:1029425:G:A	rs118139163	G	A	G	SOX2_HMG_3	-2	0	+	0	0	.
chr8	1116541	1116542	chr8:1116542:T:A	rs80327531	T	A	T	SOX2_HMG_3	-16	0	+	0	0	.
chr8	1198204	1198205	chr8:1198205:T:G	rs17065804	T	G	-	SOX2_HMG_3	8	1	+	3.772034148003927	3.6345662281392643	GAGCAATTTCCTTGAGG
chr8	1289416	1289417	chr8:1289417:A:G	rs13277401	A	G	A	SOX2_HMG_3	-17	0	-	0	0	.
chr8	1755402	1755403	chr8:1755403:G:T	rs4595147	G	T	T	SOX2_HMG_3	-2	0	-	0	0	.
chr8	1886545	1886546	chr8:1886546:A:G	rs747249389	A	G	A	SOX2_HMG_3	19	0	-	0	0	.
chr8	1941756	1941757	chr8:1941757:C:T	rs148977755	C	T	C	SOX2_HMG_3	26	0	-	0	0	.
chr8	1978289	1978290	chr8:1978290:G:C	rs9657382	G	C	G	SOX2_HMG_3	-3	0	-	0	0	.
chr8	1995582	1995583	chr8:1995583:T:C	rs11997759	T	C	C	SOX2_HMG_3	15	1	+	9.189588634751855	6.346879478574998	CATCAGTGTCAGTGATG
chr8	2107591	2107592	chr8:2107592:T:C	rs6988144	T	C	C	SOX2_HMG_3	-3	0	+	0	0	.
chr8	2240046	2240047	chr8:2240047:C:G	rs1233077610	C	G	g	SOX2_HMG_3	20	0	+	0	0	.
chr8	2242438	2242439	chr8:2242439:A:C	rs200120688	A	C	a	SOX2_HMG_3	28	0	-	0	0	.
chr8	2479564	2479565	chr8:2479565:T:G	rs59579767	T	G	t	SOX2_HMG_3	18	0	-	0	0	.
chr8	2493394	2493395	chr8:2493395:C:T	rs6998131	C	T	T	SOX2_HMG_3	-12	0	-	0	0	.
chr8	2916604	2916605	chr8:2916605:T:C	rs2604134	T	C	C	SOX2_HMG_3	1	1	+	4.60988851042273	4.60988851042273	CTTCAATGCTAGGGAAA
chr8	2989934	2989935	chr8:2989935:G:A	rs627327	G	A	g	SOX2_HMG_3	19	0	+	0	0	.
chr8	3358762	3358763	chr8:3358763:C:T	rs9774400	C	T	C	SOX2_HMG_3	-12	0	+	0	0	.
chr8	3495789	3495790	chr8:3495790:T:C	rs7843935	T	C	T	SOX2_HMG_3	5	1	-	7.11078921644309	0.2020344371278695	GCTCAATGTCATTAAAG
chr8	3504484	3504485	chr8:3504485:G:C	rs7839049	G	C	g	SOX2_HMG_3	14	1	+	5.6153099992973985	2.964888911031824	GATCAATGGCAGTTGTG
chr8	3525683	3525684	chr8:3525684:A:G	rs573338135	A	G	A	SOX2_HMG_3	25	0	+	0	0	.
chr8	3661470	3661471	chr8:3661471:C:T	rs2623630	C	T	C	SOX2_HMG_3	29	0	-	0	0	.
chr8	3771710	3771711	chr8:3771711:C:G	rs143025491	C	G	C	SOX2_HMG_3	31	0	-	0	0	.
chr8	3780200	3780201	chr8:3780201:A:T	rs73658259	A	T	A	SOX2_HMG_3	30	0	-	0	0	.
chr8	3780219	3780220	chr8:3780220:C:T	rs117082573	C	T	C	SOX2_HMG_3	11	1	-	3.115400407379755	-2.1602111216326434	GATTAATGCCAGTGTAC
chr8	3780240	3780241	chr8:3780241:T:C	rs73658260	T	C	T	SOX2_HMG_3	-10	0	-	0	0	.
chr8	3780241	3780242	chr8:3780242:T:C	rs969888982	T	C	T	SOX2_HMG_3	-11	0	-	0	0	.
chr8	4122794	4122795	chr8:4122795:A:G	rs7816211	A	G	A	SOX2_HMG_3	28	0	+	0	0	.
chr8	4136190	4136191	chr8:4136191:G:A	rs13252372	G	A	G	SOX2_HMG_3	23	0	-	0	0	.
chr8	4614709	4614710	chr8:4614710:G:C	rs2617109	G	C	C	SOX2_HMG_3	-17	0	+	0	0	.
chr8	4732534	4732535	chr8:4732535:T:C	rs13255293	T	C	T	SOX2_HMG_3	6	1	+	6.542821278898546	-0.36593350041667444	TTGCAATGCAATTGAAT
chr8	5011002	5011003	chr8:5011003:T:C	rs7836231	T	C	C	SOX2_HMG_3	23	0	-	0	0	.
chr8	5455977	5455978	chr8:5455978:G:T	rs7827464	G	T	G	SOX2_HMG_3	23	0	+	0	0	.
chr8	6302087	6302088	chr8:6302088:C:T	rs4840689	C	T	T	SOX2_HMG_3	23	0	-	0	0	.
chr8	6302100	6302101	chr8:6302101:T:C	rs4840690	T	C	T	SOX2_HMG_3	10	1	-	3.1423671917841838	-3.7663875875310366	GATCAAATGTAGTGGAG
chr8	6313802	6313803	chr8:6313803:A:C	rs6999296	A	C	C	SOX2_HMG_3	18	0	+	0	0	.
chr8	6327836	6327837	chr8:6327837:C:T	rs71505115	C	T	C	SOX2_HMG_3	-12	0	+	0	0	.
chr8	6327839	6327840	chr8:6327840:G:C	rs12550696	G	C	G	SOX2_HMG_3	-9	0	+	0	0	.
chr8	6464112	6464113	chr8:6464113:T:A	rs145968388	T	A	T	SOX2_HMG_3	-11	0	-	0	0	.
chr8	6486910	6486911	chr8:6486911:A:T	rs2440433	A	T	T	SOX2_HMG_3	-1	0	-	0	0	.
chr8	6517667	6517668	chr8:6517668:C:T	rs79799803	C	T	C	SOX2_HMG_3	-15	0	-	0	0	.
chr8	6533305	6533306	chr8:6533306:T:C	rs145792022	T	C	T	SOX2_HMG_3	-13	0	-	0	0	.
chr8	6547950	6547951	chr8:6547951:C:T	rs111233592	C	T	C	SOX2_HMG_3	-16	0	+	0	0	.
chr8	6564331	6564332	chr8:6564332:T:C	rs73201303	T	C	T	SOX2_HMG_3	17	0	-	0	0	.
chr8	6566470	6566471	chr8:6566471:G:A	rs2442528	G	A	G	SOX2_HMG_3	28	0	+	0	0	.
chr8	6589334	6589335	chr8:6589335:G:A	rs73509269	G	A	G	SOX2_HMG_3	18	0	+	0	0	.
chr8	6602321	6602322	chr8:6602322:G:A	rs75521833	G	A	G	SOX2_HMG_3	-9	0	+	0	0	.
chr8	6643022	6643023	chr8:6643023:C:T	rs1057091	C	T	T	SOX2_HMG_3	34	0	-	0	0	.
chr8	6676444	6676445	chr8:6676445:G:A	rs12542460	G	A	G	SOX2_HMG_3	-12	0	-	0	0	.
chr8	6728061	6728062	chr8:6728062:A:G	rs17574102	A	G	A	SOX2_HMG_3	32	0	+	0	0	.
chr8	6919528	6919529	chr8:6919529:A:G	rs2741694	A	G	A	SOX2_HMG_3	6	1	-	3.1925585372039293	-3.7161962421112906	AAACAATGACAGAGAGG
chr8	6960119	6960120	chr8:6960120:G:T	rs111293704	G	T	G	SOX2_HMG_3	-8	0	+	0	0	.
chr8	6961721	6961722	chr8:6961722:T:C	rs62488525	T	C	.	SOX2_HMG_3	-8	0	-	0	0	.
chr8	7355433	7355434	chr8:7355434:G:T	rs1223566227	G	T	g	SOX2_HMG_3	31	0	-	0	0	.
chr8	8273156	8273157	chr8:8273157:A:T	rs76072795	A	T	A	SOX2_HMG_3	-2	0	+	0	0	.
chr8	8273167	8273168	chr8:8273168:C:T	chr8:8273168:C:T	C	T	C	SOX2_HMG_3	9	1	+	2.840323261725984	3.64699339566303	CGTCACTGGCAGTGTGG
chr8	8273171	8273172	chr8:8273172:G:A	rs114763371	G	A	G	SOX2_HMG_3	13	1	+	2.840323261725984	-4.068431517589236	CGTCACTGGCAGTGTGG
chr8	8314760	8314761	chr8:8314761:A:G	rs6601689	A	G	A	SOX2_HMG_3	-6	0	+	0	0	.
chr8	8352500	8352501	chr8:8352501:G:C	rs17604776	G	C	G	SOX2_HMG_3	21	0	-	0	0	.
chr8	8480920	8480921	chr8:8480921:C:G	rs2979193	C	G	A	SOX2_HMG_3	-9	0	-	0	0	.
chr8	8525554	8525555	chr8:8525555:C:A	rs7820213	C	A	C	SOX2_HMG_3	-4	0	-	0	0	.
chr8	8736736	8736737	chr8:8736737:G:A	rs575895	G	A	G	SOX2_HMG_3	-19	0	+	0	0	.
chr8	8736743	8736744	chr8:8736744:C:T	rs575920	C	T	C	SOX2_HMG_3	-12	0	+	0	0	.
chr8	8740877	8740878	chr8:8740878:A:T	rs1703982	A	T	T	SOX2_HMG_3	34	0	-	0	0	.
chr8	8860937	8860938	chr8:8860938:G:A	rs115077991	G	A	G	SOX2_HMG_3	34	0	-	0	0	.
chr8	8941173	8941174	chr8:8941174:A:G	rs7844374	A	G	G	SOX2_HMG_3	-19	0	+	0	0	.
chr8	9009900	9009901	chr8:9009901:G:C	rs2915251	G	C	G	SOX2_HMG_3	13	1	+	8.573320224862842	1.6645654455476206	TGACAATGATAGTGAAA
chr8	9413933	9413934	chr8:9413934:C:G	rs7001736	C	G	G	SOX2_HMG_3	-5	0	+	0	0	.
chr8	10055671	10055672	chr8:10055672:C:T	rs2293090	C	T	C	SOX2_HMG_3	-4	0	+	0	0	.
chr8	10055678	10055679	chr8:10055679:C:G	rs796413431	C	G	C	SOX2_HMG_3	3	1	+	4.548285278197007	-2.3604695011182137	GCTCAATGCCAGAGAAA
chr8	10267141	10267142	chr8:10267142:A:T	rs117627230	A	T	A	SOX2_HMG_3	21	0	+	0	0	.
chr8	10349907	10349908	chr8:10349908:C:T	rs35309707	C	T	C	SOX2_HMG_3	32	0	+	0	0	.
chr8	10532580	10532581	chr8:10532581:T:A	rs28627954	T	A	t	SOX2_HMG_3	15	1	+	3.782682894789078	2.5477804580723555	AGGCAAATGTATTGATA
chr8	10554605	10554606	chr8:10554606:A:G	rs7004553	A	G	A	SOX2_HMG_3	6	1	-	3.026967246292603	-3.881787533022616	CAGCAATTTCATGGAGG
chr8	10555657	10555658	chr8:10555658:T:C	rs7842834	T	C	T	SOX2_HMG_3	10	1	-	3.3254545488983913	-3.583300230416829	AATCAATAGAAGGGAGT
chr8	10703644	10703645	chr8:10703645:T:C	rs6601506	T	C	C	SOX2_HMG_3	4	1	-	2.3297270110871873	-4.579027768228032	AGTCAGTGGCATTGCTG
chr8	10777786	10777787	chr8:10777787:T:C	rs2116095	T	C	C	SOX2_HMG_3	-6	0	-	0	0	.
chr8	10927988	10927989	chr8:10927989:A:G	rs141666755	A	G	A	SOX2_HMG_3	11	1	-	3.6345662281392643	-3.0581252700930825	GAGCATTTGCATTGAGG
chr8	11069164	11069165	chr8:11069165:A:C	rs13248300	A	C	A	SOX2_HMG_3	35	0	-	0	0	.
chr8	11280310	11280311	chr8:11280311:C:T	rs2572419	C	T	T	SOX2_HMG_3	0	1	+	8.73923010078013	8.601901122731466	CAACAATATTATTGTTA
chr8	11692274	11692275	chr8:11692275:T:C	rs73537803	T	C	T	SOX2_HMG_3	-17	0	+	0	0	.
chr8	11738459	11738460	chr8:11738460:G:A	rs2898295	G	A	G	SOX2_HMG_3	36	0	-	0	0	.
chr8	11754871	11754872	chr8:11754872:T:C	rs13273672	T	C	C	SOX2_HMG_3	10	1	-	5.2282329080238705	-1.6805218712913512	AATCAATTCCATTTTTA
chr8	11965745	11965746	chr8:11965746:A:G	rs4841657	A	G	G	SOX2_HMG_3	34	0	-	0	0	.
chr8	11965786	11965787	chr8:11965787:G:C	rs58120446	G	C	G	SOX2_HMG_3	-7	0	-	0	0	.
chr8	11965793	11965794	chr8:11965794:C:G	rs58637143	C	G	C	SOX2_HMG_3	-14	0	-	0	0	.
chr8	12433905	12433906	chr8:12433906:C:A	rs80169473	C	A	.	SOX2_HMG_3	-16	0	+	0	0	.
chr8	12466378	12466379	chr8:12466379:A:G	rs2980510	A	G	.	SOX2_HMG_3	20	0	+	0	0	.
chr8	12552417	12552418	chr8:12552418:G:A	rs62495636	G	A	.	SOX2_HMG_3	22	0	-	0	0	.
chr8	12756953	12756954	chr8:12756954:C:T	rs78815005	C	T	T	SOX2_HMG_3	11	1	-	4.063383775023719	-1.212227753988679	GTGCAATGTGAGTGATA
chr8	12771868	12771869	chr8:12771869:C:T	rs35649296	C	T	C	SOX2_HMG_3	9	1	+	11.244438777872311	12.051108911809358	AATCAATTTCATTGTAT
chr8	12810294	12810295	chr8:12810295:G:C	rs11773992	G	C	G	SOX2_HMG_3	13	1	+	4.045719964456981	-2.86303481485824	TATAAATGCTATTGTCT
chr8	12837680	12837681	chr8:12837681:T:C	rs6981317	T	C	C	SOX2_HMG_3	4	1	-	4.307443511408891	-2.6013112679063286	GATGAATTTAATTGTAG
chr8	13220881	13220882	chr8:13220882:C:A	rs1188299	C	A	C	SOX2_HMG_3	31	0	+	0	0	.
chr8	13297101	13297102	chr8:13297102:T:A	rs7007504	T	A	T	SOX2_HMG_3	33	0	+	0	0	.
chr8	13440298	13440299	chr8:13440299:C:T	rs13272331	C	T	C	SOX2_HMG_3	0	1	+	3.519080242213668	3.3817512641650027	CTTCATTGGTATTGTAT
chr8	13459984	13459985	chr8:13459985:G:T	rs78411848	G	T	T	SOX2_HMG_3	26	0	-	0	0	.
chr8	13571628	13571629	chr8:13571629:C:T	rs11775957	C	T	T	SOX2_HMG_3	0	1	-	3.4968284245471155	3.276234145461822	GAGCAATGCAAGTGTCC
chr8	13588022	13588023	chr8:13588023:T:C	rs80321840	T	C	C	SOX2_HMG_3	-14	0	-	0	0	.
chr8	13603708	13603709	chr8:13603709:G:A	rs17094719	G	A	G	SOX2_HMG_3	34	0	+	0	0	.
chr8	13640501	13640502	chr8:13640502:C:T	rs7014659	C	T	C	SOX2_HMG_3	-15	0	+	0	0	.
chr8	13640533	13640534	chr8:13640534:G:A	rs28565094	G	A	G	SOX2_HMG_3	17	0	+	0	0	.
chr8	13662595	13662596	chr8:13662596:A:G	rs17116999	A	G	A	SOX2_HMG_3	29	0	+	0	0	.
chr8	13723597	13723598	chr8:13723598:G:A	rs11203518	G	A	G	SOX2_HMG_3	22	0	+	0	0	.
chr8	13923294	13923295	chr8:13923295:A:G	rs7819836	A	G	A	SOX2_HMG_3	5	1	+	3.729928716489622	-3.1788260628255993	GTTCAATACTAATGAAT
chr8	14054179	14054180	chr8:14054180:C:A	rs17118485	C	A	c	SOX2_HMG_3	25	0	+	0	0	.
chr8	14229774	14229775	chr8:14229775:G:T	rs9657231	G	T	G	SOX2_HMG_3	9	1	-	6.489233898419971	5.437328690410288	AAGCAATTACAGTGAAC
chr8	14229968	14229969	chr8:14229969:C:T	rs7830988	C	T	C	SOX2_HMG_3	35	0	+	0	0	.
chr8	14697838	14697839	chr8:14697839:A:T	rs17321361	A	T	A	SOX2_HMG_3	-15	0	+	0	0	.
chr8	15027039	15027040	chr8:15027040:C:T	rs4631467	C	T	T	SOX2_HMG_3	17	0	+	0	0	.
chr8	15212629	15212630	chr8:15212630:C:A	rs62502013	C	A	C	SOX2_HMG_3	27	0	+	0	0	.
chr8	15325401	15325402	chr8:15325402:C:T	rs75263565	C	T	C	SOX2_HMG_3	7	1	-	2.8043184162822925	0.0755312957209584	TAGCACTGCCAGTGAAA
chr8	15325415	15325416	chr8:15325416:G:A	rs10093109	G	A	A	SOX2_HMG_3	-7	0	-	0	0	.
chr8	15406876	15406877	chr8:15406877:G:C	rs60930385	G	C	G	SOX2_HMG_3	13	1	+	1.7264995487684685	-5.182255230546751	GCTCAATGAGATGGATG
chr8	15442687	15442688	chr8:15442688:T:G	rs17473297	T	G	T	SOX2_HMG_3	-10	0	-	0	0	.
chr8	15582559	15582560	chr8:15582560:G:A	rs1429085	G	A	A	SOX2_HMG_3	20	0	-	0	0	.
chr8	15586693	15586694	chr8:15586694:T:C	rs17657878	T	C	T	SOX2_HMG_3	6	1	+	6.551441102268708	-0.35731367704651373	ACTGAATGCTATTGAAA
chr8	15851691	15851692	chr8:15851692:A:G	rs62501482	A	G	A	SOX2_HMG_3	30	0	+	0	0	.
chr8	16086714	16086715	chr8:16086715:C:T	rs2410385	C	T	T	SOX2_HMG_3	11	1	-	4.198132954796858	-1.077478574215539	TAGCATTGACAGTGATG
chr8	16149885	16149886	chr8:16149886:A:C	rs351554	A	C	C	SOX2_HMG_3	10	1	+	9.858929790640238	2.9501750113250167	TATCATTGTTAGTGATG
chr8	16213352	16213353	chr8:16213353:A:C	rs55810429	A	C	A	SOX2_HMG_3	-8	0	-	0	0	.
chr8	16779977	16779978	chr8:16779978:T:G	rs144371966	T	G	T	SOX2_HMG_3	8	1	+	7.305483543287705	7.168015623423042	ACTCAATATAATTGTAG
chr8	16779991	16779992	chr8:16779992:G:C	rs117062586	G	C	G	SOX2_HMG_3	22	0	+	0	0	.
chr8	16794827	16794828	chr8:16794828:A:G	rs686055	A	G	A	SOX2_HMG_3	-2	0	+	0	0	.
chr8	16997293	16997294	chr8:16997294:C:T	rs10106536	C	T	C	SOX2_HMG_3	23	0	-	0	0	.
chr8	17105852	17105853	chr8:17105853:A:T	rs1851712	A	T	A	SOX2_HMG_3	-1	0	-	0	0	.
chr8	17406315	17406316	chr8:17406316:A:G	rs78739229	A	G	A	SOX2_HMG_3	-6	0	+	0	0	.
chr8	17412123	17412124	chr8:17412124:A:G	rs1003299	A	G	A	SOX2_HMG_3	-4	0	-	0	0	.
chr8	17446831	17446832	chr8:17446832:G:C	rs11203860	G	C	G	SOX2_HMG_3	34	0	-	0	0	.
chr8	17466617	17466618	chr8:17466618:A:G	rs540524620	A	G	A	SOX2_HMG_3	-18	0	-	0	0	.
chr8	17678578	17678579	chr8:17678579:T:C	rs7459632	T	C	C	SOX2_HMG_3	-14	0	-	0	0	.
chr8	17684433	17684434	chr8:17684434:T:G	rs61748836	T	G	T	SOX2_HMG_3	-14	0	+	0	0	.
chr8	17684447	17684448	chr8:17684448:C:T	rs74754090	C	T	C	SOX2_HMG_3	0	1	+	6.782499472018218	6.645170493969555	CGTCAATTCAAGTGTTT
chr8	17685909	17685910	chr8:17685910:T:C	rs6586630	T	C	T	SOX2_HMG_3	-1	0	-	0	0	.
chr8	17693260	17693261	chr8:17693261:T:C	rs186022	T	C	T	SOX2_HMG_3	6	1	+	3.203506648003018	-3.7052481313122025	TCTCCATGTCAGTGACG
chr8	17693277	17693278	chr8:17693278:C:A	rs4921805	C	A	C	SOX2_HMG_3	23	0	+	0	0	.
chr8	17820903	17820904	chr8:17820904:G:A	rs10090976	G	A	A	SOX2_HMG_3	11	1	-	7.361430368289276	14.054121866521625	AATCAATTTCACTGAGA
chr8	17831973	17831974	chr8:17831974:C:A	rs75293870	C	A	C	SOX2_HMG_3	25	0	+	0	0	.
chr8	17882028	17882029	chr8:17882029:T:C	rs3739406	T	C	T	SOX2_HMG_3	6	1	+	4.23552732950405	-2.6732274498111708	GATCAATGACAGTATTC
chr8	18172798	18172799	chr8:18172799:C:A	rs2040474	C	A	A	SOX2_HMG_3	22	0	-	0	0	.
chr8	18572152	18572153	chr8:18572153:C:T	rs2717756	C	T	C	SOX2_HMG_3	36	0	-	0	0	.
chr8	18582103	18582104	chr8:18582104:G:A	rs17596349	G	A	G	SOX2_HMG_3	25	0	+	0	0	.
chr8	18672253	18672254	chr8:18672254:T:C	rs17695724	T	C	T	SOX2_HMG_3	16	1	+	5.257562799086144	4.06079074594579	GGTCAATTATATTTAAT
chr8	18803454	18803455	chr8:18803455:A:C	rs76728814	A	C	A	SOX2_HMG_3	12	1	-	3.617341022694859	-3.2914137566203614	TTTCAATTGTTTTGAGT
chr8	18945379	18945380	chr8:18945380:A:G	rs7013664	A	G	A	SOX2_HMG_3	17	0	-	0	0	.
chr8	19110311	19110312	chr8:19110312:G:T	rs11779160	G	T	G	SOX2_HMG_3	-10	0	+	0	0	.
chr8	19141743	19141744	chr8:19141744:C:A	rs11778029	C	A	C	SOX2_HMG_3	-3	0	+	0	0	.
chr8	19141765	19141766	chr8:19141766:C:A	rs333031	C	A	C	SOX2_HMG_3	19	0	+	0	0	.
chr8	19210067	19210068	chr8:19210068:A:G	rs17127976	A	G	A	SOX2_HMG_3	-19	0	+	0	0	.
chr8	19250989	19250990	chr8:19250990:C:T	rs2683310	C	T	C	SOX2_HMG_3	-8	0	+	0	0	.
chr8	19299394	19299395	chr8:19299395:A:G	rs2139766	A	G	G	SOX2_HMG_3	28	0	-	0	0	.
chr8	19299417	19299418	chr8:19299418:T:C	rs17128148	T	C	T	SOX2_HMG_3	5	1	-	4.212779470057339	-2.695975309257882	CATCAATGTTAATGGAC
chr8	19584296	19584297	chr8:19584297:C:T	rs115989737	C	T	T	SOX2_HMG_3	17	0	+	0	0	.
chr8	19728626	19728627	chr8:19728627:C:G	rs117009166	C	G	C	SOX2_HMG_3	-20	0	-	0	0	.
chr8	19848660	19848661	chr8:19848661:A:T	rs4520184	A	T	T	SOX2_HMG_3	17	0	-	0	0	.
chr8	19869535	19869536	chr8:19869536:C:T	rs1441778	C	T	T	SOX2_HMG_3	-20	0	+	0	0	.
chr8	19880748	19880749	chr8:19880749:G:A	rs6586876	G	A	A	SOX2_HMG_3	-6	0	-	0	0	.
chr8	19898465	19898466	chr8:19898466:G:T	rs12543154	G	T	G	SOX2_HMG_3	-12	0	-	0	0	.
chr8	20251851	20251852	chr8:20251852:G:A	rs2645384	G	A	A	SOX2_HMG_3	36	0	-	0	0	.
chr8	20462635	20462636	chr8:20462636:T:A	rs80249734	T	A	T	SOX2_HMG_3	-4	0	+	0	0	.
chr8	20524022	20524023	chr8:20524023:T:G	rs17492141	T	G	T	SOX2_HMG_3	32	0	-	0	0	.
chr8	20979189	20979190	chr8:20979190:A:G	rs573980	A	G	G	SOX2_HMG_3	1	1	-	4.886236978418308	4.886236978418308	GTTCATTTATATTGAAG
chr8	21182546	21182547	chr8:21182547:C:G	rs11986857	C	G	C	SOX2_HMG_3	-6	0	+	0	0	.
chr8	21927477	21927478	chr8:21927478:A:G	rs4872110	A	G	G	SOX2_HMG_3	35	0	-	0	0	.
chr8	21948501	21948502	chr8:21948502:T:A	rs182544764	T	A	T	SOX2_HMG_3	0	1	-	7.583149231607893	6.9213476309332	AGGCAATTTCATTGTTG
chr8	22109837	22109838	chr8:22109838:G:A	rs7831322	G	A	g	SOX2_HMG_3	0	1	-	5.761204301035722	5.6238753229870575	CGGCAATGCCATTGTGT
chr8	22190721	22190722	chr8:22190722:T:C	rs73225853	T	C	T	SOX2_HMG_3	5	1	-	3.275268780484297	-3.6334859988309245	CATCAATGCTAGTCGGG
chr8	22349856	22349857	chr8:22349857:T:C	rs79021774	T	C	C	SOX2_HMG_3	11	1	+	3.325240012487916	-3.36745148574443	AGGCACTGCCATTGAAG
chr8	22463292	22463293	chr8:22463293:G:A	rs10108011	G	A	A	SOX2_HMG_3	-14	0	+	0	0	.
chr8	22537995	22537996	chr8:22537996:G:A	rs1482337	G	A	A	SOX2_HMG_3	25	0	-	0	0	.
chr8	22797755	22797756	chr8:22797756:C:T	rs4872027	C	T	T	SOX2_HMG_3	21	0	-	0	0	.
chr8	22865215	22865216	chr8:22865216:T:G	rs144437734	T	G	T	SOX2_HMG_3	-9	0	-	0	0	.
chr8	23106268	23106269	chr8:23106269:T:C	rs4620285	T	C	T	SOX2_HMG_3	4	1	-	2.742937412035042	-4.165817367280179	AGGCAAGGGTAGTGAGA
chr8	23119040	23119041	chr8:23119041:C:T	rs60052954	C	T	C	SOX2_HMG_3	-15	0	+	0	0	.
chr8	23160053	23160054	chr8:23160054:G:T	rs7838365	G	T	G	SOX2_HMG_3	-19	0	+	0	0	.
chr8	23218045	23218046	chr8:23218046:A:G	rs376252473	A	G	a	SOX2_HMG_3	27	0	+	0	0	.
chr8	23230660	23230661	chr8:23230661:G:T	rs4242393	G	T	G	SOX2_HMG_3	3	1	-	3.1621174604117295	-3.746637318903492	TCTCAAATGTAGTGAAA
chr8	23352922	23352923	chr8:23352923:G:A	rs4872109	G	A	G	SOX2_HMG_3	-17	0	+	0	0	.
chr8	23366399	23366400	chr8:23366400:A:G	rs17089165	A	G	A	SOX2_HMG_3	11	1	-	4.16839313769595	-2.524298360536397	CCTCCATGCAATTGAAA
chr8	23366500	23366501	chr8:23366501:A:G	rs7818494	A	G	A	SOX2_HMG_3	5	1	-	6.987388944890297	6.987388944890297	AGTCATTGAAATTGATA
chr8	23497945	23497946	chr8:23497946:G:A	rs7813840	G	A	A	SOX2_HMG_3	-14	0	+	0	0	.
chr8	23513182	23513183	chr8:23513183:G:A	rs17089318	G	A	G	SOX2_HMG_3	21	0	+	0	0	.
chr8	23925155	23925156	chr8:23925156:G:A	rs1705701	G	A	a	SOX2_HMG_3	0	1	+	4.928610791844891	4.708016512759597	GTTCAATTGCATTTAAG
chr8	24339856	24339857	chr8:24339857:A:G	rs11998324	A	G	A	SOX2_HMG_3	28	0	+	0	0	.
chr8	24706899	24706900	chr8:24706900:G:A	rs17052420	G	A	G	SOX2_HMG_3	19	0	+	0	0	.
chr8	24951553	24951554	chr8:24951554:C:T	rs2979704	C	T	T	SOX2_HMG_3	-19	0	+	0	0	.
chr8	25378076	25378077	chr8:25378077:G:A	rs2709624	G	A	A	SOX2_HMG_3	23	0	-	0	0	.
chr8	25378081	25378082	chr8:25378082:C:G	rs111902374	C	G	C	SOX2_HMG_3	18	0	-	0	0	.
chr8	25390070	25390071	chr8:25390071:G:T	rs1000798	G	T	G	SOX2_HMG_3	-14	0	+	0	0	.
chr8	25393108	25393109	chr8:25393109:T:C	rs147924957	T	C	T	SOX2_HMG_3	27	0	+	0	0	.
chr8	25455702	25455703	chr8:25455703:G:A	rs11987149	G	A	A	SOX2_HMG_3	33	0	-	0	0	.
chr8	25455743	25455744	chr8:25455744:T:C	rs11984651	T	C	c	SOX2_HMG_3	-8	0	-	0	0	.
chr8	25455744	25455745	chr8:25455745:G:A	rs11987153	G	A	G	SOX2_HMG_3	-9	0	-	0	0	.
chr8	25690566	25690567	chr8:25690567:A:G	rs17054185	A	G	A	SOX2_HMG_3	5	1	+	8.516674860590937	1.6079200812757162	GGGCAATTTCATTGATC
chr8	25690749	25690750	chr8:25690750:G:T	rs2433096	G	T	T	SOX2_HMG_3	-1	0	-	0	0	.
chr8	25804592	25804593	chr8:25804593:T:C	rs76771493	T	C	T	SOX2_HMG_3	36	0	+	0	0	.
chr8	25978409	25978410	chr8:25978410:G:C	rs7012877	G	C	G	SOX2_HMG_3	35	0	+	0	0	.
chr8	26078047	26078048	chr8:26078048:C:G	rs13439370	C	G	C	SOX2_HMG_3	16	1	+	4.612470045811619	6.612312540728162	GGTCAATGCTATTAACC
chr8	26193406	26193407	chr8:26193407:G:A	rs12677259	G	A	G	SOX2_HMG_3	-3	0	+	0	0	.
chr8	26202156	26202157	chr8:26202157:C:T	rs12674998	C	T	T	SOX2_HMG_3	27	0	-	0	0	.
chr8	26287357	26287358	chr8:26287358:C:G	rs375154917	C	G	C	SOX2_HMG_3	3	1	+	4.832138265068416	-2.0766165142468043	GAACAATGTCAGAGAAG
chr8	26422348	26422349	chr8:26422349:C:T	rs17055205	C	T	C	SOX2_HMG_3	13	1	-	5.817237800428169	-1.0915169788870518	TTTGAATGGCATTGAAA
chr8	26445900	26445901	chr8:26445901:T:C	rs7823542	T	C	C	SOX2_HMG_3	18	0	+	0	0	.
chr8	26483736	26483737	chr8:26483737:T:C	rs10101608	T	C	T	SOX2_HMG_3	-17	0	-	0	0	.
chr8	26528895	26528896	chr8:26528896:A:G	rs73224175	A	G	A	SOX2_HMG_3	-12	0	-	0	0	.
chr8	26603546	26603547	chr8:26603547:A:G	rs7818193	A	G	A	SOX2_HMG_3	4	1	+	3.025003428437042	-3.8837513508781774	GTTCAGTGGCATTGTGT
chr8	26639132	26639133	chr8:26639133:G:T	rs73227622	G	T	G	SOX2_HMG_3	29	0	+	0	0	.
chr8	26643113	26643114	chr8:26643114:A:G	rs10093591	A	G	A	SOX2_HMG_3	-17	0	+	0	0	.
chr8	26813277	26813278	chr8:26813278:C:T	rs4732897	C	T	T	SOX2_HMG_3	3	1	+	4.552953980077219	-2.3558007992380015	AATCATTTTCAGTGACA
chr8	26899870	26899871	chr8:26899871:G:T	rs73569910	G	T	G	SOX2_HMG_3	15	1	+	3.4786605080000204	5.146036526267643	TCTAAATGGTATTGTGA
chr8	27386782	27386783	chr8:27386783:A:G	rs11776858	A	G	G	SOX2_HMG_3	4	1	+	3.388307171098591	-3.5204476082166285	AGACAATGGTTTTGTTG
chr8	27400568	27400569	chr8:27400569:G:A	rs2115805	G	A	A	SOX2_HMG_3	7	1	+	7.608789558544338	4.880002437983003	AATCAACGTAATTGAGT
chr8	27454185	27454186	chr8:27454186:T:C	rs1879184	T	C	C	SOX2_HMG_3	31	0	-	0	0	.
chr8	27545259	27545260	chr8:27545260:G:A	rs7341557	G	A	G	SOX2_HMG_3	-16	0	-	0	0	.
chr8	27616684	27616685	chr8:27616685:A:G	rs9314349	A	G	G	SOX2_HMG_3	10	1	+	2.6533984173634253	-4.255356361951794	GATCATAGACATTGATT
chr8	27617081	27617082	chr8:27617082:C:T	rs1982229	C	T	T	SOX2_HMG_3	-20	0	+	0	0	.
chr8	27617126	27617127	chr8:27617127:A:C	chr8:27617127:A:C	A	C	A	SOX2_HMG_3	25	0	+	0	0	.
chr8	27625976	27625977	chr8:27625977:C:T	rs10096040	C	T	c	SOX2_HMG_3	-17	0	+	0	0	.
chr8	27659259	27659260	chr8:27659260:A:G	rs140412565	A	G	.	SOX2_HMG_3	15	1	-	1.591469336663967	-1.2512398195128913	TGTCGGTGGCATTGATG
chr8	27751216	27751217	chr8:27751217:A:C	rs1460225	A	C	t	SOX2_HMG_3	5	1	+	3.8589130558091975	-3.049841723506022	CAGCAATGGAAGGGATA
chr8	27751237	27751238	chr8:27751238:G:A	rs1073235	G	A	G	SOX2_HMG_3	26	0	+	0	0	.
chr8	27896585	27896586	chr8:27896586:T:C	rs2685373	T	C	t	SOX2_HMG_3	20	0	-	0	0	.
chr8	27896597	27896598	chr8:27896598:G:A	rs113718537	G	A	G	SOX2_HMG_3	8	1	-	3.610774679241766	4.482511031877629	GTTCAACACTATTGAGA
chr8	27974648	27974649	chr8:27974649:A:G	rs2727006	A	G	G	SOX2_HMG_3	26	0	-	0	0	.
chr8	28001903	28001904	chr8:28001904:C:T	rs56858294	C	T	T	SOX2_HMG_3	31	0	-	0	0	.
chr8	28008804	28008805	chr8:28008805:T:C	rs7831209	T	C	C	SOX2_HMG_3	19	0	+	0	0	.
chr8	28437546	28437547	chr8:28437547:A:G	rs56290800	A	G	A	SOX2_HMG_3	26	0	+	0	0	.
chr8	29062848	29062849	chr8:29062849:T:G	rs116634247	T	G	T	SOX2_HMG_3	-20	0	+	0	0	.
chr8	29317815	29317816	chr8:29317816:G:C	rs183070095	G	C	G	SOX2_HMG_3	26	0	+	0	0	.
chr8	29402846	29402847	chr8:29402847:T:A	rs66476671	T	A	A	SOX2_HMG_3	24	0	-	0	0	.
chr8	29551641	29551642	chr8:29551642:A:G	rs13273498	A	G	A	SOX2_HMG_3	25	0	-	0	0	.
chr8	29555331	29555332	chr8:29555332:T:C	rs6998142	T	C	C	SOX2_HMG_3	-6	0	-	0	0	.
chr8	29575734	29575735	chr8:29575735:C:T	rs56346320	C	T	T	SOX2_HMG_3	24	0	+	0	0	.
chr8	29671315	29671316	chr8:29671316:C:T	rs76943696	C	T	C	SOX2_HMG_3	9	1	+	4.6141632902439245	5.420833424180972	CTTCAATGTCATTTTTA
chr8	29671340	29671341	chr8:29671341:T:C	rs28393030	T	C	C	SOX2_HMG_3	34	0	+	0	0	.
chr8	29685450	29685451	chr8:29685451:A:G	rs145340002	A	G	A	SOX2_HMG_3	-3	0	+	0	0	.
chr8	29829404	29829405	chr8:29829405:G:A	rs13255271	G	A	G	SOX2_HMG_3	-18	0	-	0	0	.
chr8	29985301	29985302	chr8:29985302:T:C	rs4733085	T	C	T	SOX2_HMG_3	25	0	+	0	0	.
chr8	30279310	30279311	chr8:30279311:G:A	rs10113031	G	A	G	SOX2_HMG_3	-19	0	+	0	0	.
chr8	30458644	30458645	chr8:30458645:C:G	rs145224483	C	G	C	SOX2_HMG_3	31	0	+	0	0	.
chr8	30458645	30458646	chr8:30458646:A:G	rs13248936	A	G	A	SOX2_HMG_3	32	0	+	0	0	.
chr8	30476994	30476995	chr8:30476995:T:C	rs16877073	T	C	t	SOX2_HMG_3	15	1	-	3.214064190056345	2.781590608505444	AGGCAATGATGTTGAAT
chr8	30549447	30549448	chr8:30549448:A:G	rs974337804	A	G	A	SOX2_HMG_3	1	1	+	5.581790067529265	3.7501424774499723	CATAAATGAAATTGTTA
chr8	30551163	30551164	chr8:30551164:T:C	rs4489288	T	C	T	SOX2_HMG_3	-5	0	+	0	0	.
chr8	30814288	30814289	chr8:30814289:T:C	rs6996100	T	C	T	SOX2_HMG_3	6	1	+	4.5730832046376895	-2.3356715746775305	CCCCAATGTCAGTGTTT
chr8	31058110	31058111	chr8:31058111:G:A	rs7016874	G	A	G	SOX2_HMG_3	13	1	+	4.198998052621008	-2.709756726694213	TTTCATTGATAGTGAGG
chr8	31075098	31075099	chr8:31075099:C:G	rs2725383	C	G	G	SOX2_HMG_3	15	1	-	6.592472723783502	5.417139585874267	GATCACTGCCAGTGAGT
chr8	31075108	31075109	chr8:31075109:G:C	rs2737320	G	C	G	SOX2_HMG_3	5	1	-	6.592472723783502	6.592472723783502	GATCACTGCCAGTGAGT
chr8	31252307	31252308	chr8:31252308:T:C	rs373367903	T	C	T	SOX2_HMG_3	4	1	-	3.949742385308428	-2.9590123940067925	TAACAATGTCAGAGAAG
chr8	31252318	31252319	chr8:31252319:A:G	rs7002368	A	G	G	SOX2_HMG_3	-7	0	-	0	0	.
chr8	31489652	31489653	chr8:31489653:C:T	rs78573140	C	T	C	SOX2_HMG_3	-10	0	+	0	0	.
chr8	31849378	31849379	chr8:31849379:G:A	rs1481622	G	A	G	SOX2_HMG_3	36	0	+	0	0	.
chr8	32310005	32310006	chr8:32310006:A:G	rs73248780	A	G	A	SOX2_HMG_3	18	0	+	0	0	.
chr8	32334750	32334751	chr8:32334751:G:C	rs73248796	G	C	G	SOX2_HMG_3	-7	0	-	0	0	.
chr8	32440663	32440664	chr8:32440664:G:C	rs1579033	G	C	G	SOX2_HMG_3	-19	0	-	0	0	.
chr8	32571416	32571417	chr8:32571417:C:T	rs4733361	C	T	C	SOX2_HMG_3	12	1	+	4.047607420800765	10.956362200115986	AGTCAATGCCATCGTGG
chr8	32579715	32579716	chr8:32579716:C:T	rs67993561	C	T	C	SOX2_HMG_3	-13	0	-	0	0	.
chr8	32918675	32918676	chr8:32918676:C:T	rs79375804	C	T	T	SOX2_HMG_3	-16	0	-	0	0	.
chr8	32925305	32925306	chr8:32925306:A:G	rs137997942	A	G	A	SOX2_HMG_3	-14	0	+	0	0	.
chr8	33412154	33412155	chr8:33412155:G:A	rs10113715	G	A	G	SOX2_HMG_3	-7	0	+	0	0	.
chr8	33486170	33486171	chr8:33486171:A:G	rs28668083	A	G	A	SOX2_HMG_3	-2	0	+	0	0	.
chr8	33793771	33793772	chr8:33793772:T:C	rs4733455	T	C	C	SOX2_HMG_3	35	0	-	0	0	.
chr8	33915660	33915661	chr8:33915661:T:C	rs10453046	T	C	C	SOX2_HMG_3	4	1	-	4.147129619352663	-2.7616251599625565	AAGCAATGTCATTTACA
chr8	34666960	34666961	chr8:34666961:T:C	rs4455823	T	C	C	SOX2_HMG_3	17	0	-	0	0	.
chr8	34666994	34666995	chr8:34666995:C:T	rs16882722	C	T	T	SOX2_HMG_3	-17	0	-	0	0	.
chr8	34946527	34946528	chr8:34946528:T:C	rs79932223	T	C	T	SOX2_HMG_3	31	0	-	0	0	.
chr8	35587333	35587334	chr8:35587334:A:T	rs2579905	A	T	T	SOX2_HMG_3	10	1	+	4.689182720935345	-2.2195720583798755	AATGAATGAAAGTGTTA
chr8	35594677	35594678	chr8:35594678:G:A	rs2958249	G	A	G	SOX2_HMG_3	-15	0	+	0	0	.
chr8	35751729	35751730	chr8:35751730:C:G	rs28699490	C	G	C	SOX2_HMG_3	25	0	+	0	0	.
chr8	36569279	36569280	chr8:36569280:G:C	rs73601428	G	C	C	SOX2_HMG_3	13	1	+	4.612549362028037	-2.296205417287183	GTTCAATTATCTTGAAA
chr8	37117862	37117863	chr8:37117863:A:G	rs12543240	A	G	G	SOX2_HMG_3	21	0	-	0	0	.
chr8	37174539	37174540	chr8:37174540:C:T	rs59607280	C	T	T	SOX2_HMG_3	33	0	+	0	0	.
chr8	37491086	37491087	chr8:37491087:G:A	rs73675815	G	A	G	SOX2_HMG_3	26	0	-	0	0	.
chr8	37619236	37619237	chr8:37619237:G:C	rs6415419	G	C	C	SOX2_HMG_3	13	1	+	4.323799995878574	-2.584954783436646	CAGCAATGGTAGAGAGG
chr8	37741591	37741592	chr8:37741592:C:G	rs79706020	C	G	G	SOX2_HMG_3	25	0	+	0	0	.
chr8	37891958	37891959	chr8:37891959:A:G	rs55946986	A	G	A	SOX2_HMG_3	-1	0	-	0	0	.
chr8	38558679	38558680	chr8:38558680:T:G	rs34615944	T	G	T	SOX2_HMG_3	20	0	+	0	0	.
chr8	38718078	38718079	chr8:38718079:T:A	rs72634781	T	A	A	SOX2_HMG_3	-6	0	-	0	0	.
chr8	38876609	38876610	chr8:38876610:T:G	rs16887854	T	G	T	SOX2_HMG_3	16	1	+	5.559841019519335	6.362911461295525	GCTCAATGGTAGGGAAT
chr8	38915708	38915709	chr8:38915709:C:A	rs62504363	C	A	C	SOX2_HMG_3	34	0	+	0	0	.
chr8	38976667	38976668	chr8:38976668:G:T	rs138567982	G	T	G	SOX2_HMG_3	33	0	-	0	0	.
chr8	38977423	38977424	chr8:38977424:A:G	rs12680151	A	G	A	SOX2_HMG_3	10	1	-	3.439919738052883	3.439919738052883	TGTCAATATATGTGATG
chr8	39615530	39615531	chr8:39615531:A:G	rs13263586	A	G	A	SOX2_HMG_3	-17	0	-	0	0	.
chr8	39933796	39933797	chr8:39933797:C:T	rs10504013	C	T	T	SOX2_HMG_3	35	0	-	0	0	.
chr8	39933826	39933827	chr8:39933827:A:C	rs56045817	A	C	C	SOX2_HMG_3	5	1	-	5.751798404733031	5.751798404733031	AAACATTTTTATTGATA
chr8	39964647	39964648	chr8:39964648:G:A	rs2729463	G	A	G	SOX2_HMG_3	-17	0	+	0	0	.
chr8	40039468	40039469	chr8:40039469:C:T	rs964315384	C	T	C	SOX2_HMG_3	-6	0	-	0	0	.
chr8	40071069	40071070	chr8:40071070:T:C	rs7821900	T	C	C	SOX2_HMG_3	32	0	-	0	0	.
chr8	40156291	40156292	chr8:40156292:G:T	rs10958604	G	T	G	SOX2_HMG_3	-16	0	+	0	0	.
chr8	40373493	40373494	chr8:40373494:C:T	rs76022435	C	T	C	SOX2_HMG_3	-6	0	+	0	0	.
chr8	40487018	40487019	chr8:40487019:T:C	rs10504026	T	C	T	SOX2_HMG_3	15	1	-	3.9657301704443833	3.533256588893482	CCTCAATGATGGTGAAT
chr8	40487033	40487034	chr8:40487034:G:A	rs74432720	G	A	G	SOX2_HMG_3	0	1	-	3.9657301704443833	3.828401192395719	CCTCAATGATGGTGAAT
chr8	40519388	40519389	chr8:40519389:A:G	rs2565097	A	G	A	SOX2_HMG_3	28	0	-	0	0	.
chr8	40636367	40636368	chr8:40636368:T:C	rs2599649	T	C	C	SOX2_HMG_3	4	1	-	6.928611683939863	0.019856904624642846	GCTCAATGTCAGAGATG
chr8	40904266	40904267	chr8:40904267:C:A	rs6983747	C	A	A	SOX2_HMG_3	19	0	-	0	0	.
chr8	41193031	41193032	chr8:41193032:A:G	rs111693909	A	G	A	SOX2_HMG_3	-18	0	+	0	0	.
chr8	41197218	41197219	chr8:41197219:C:T	rs4527854	C	T	T	SOX2_HMG_3	-9	0	-	0	0	.
chr8	41261977	41261978	chr8:41261978:T:C	rs4736958	T	C	T	SOX2_HMG_3	-11	0	-	0	0	.
chr8	41474370	41474371	chr8:41474371:G:A	rs149293440	G	A	G	SOX2_HMG_3	22	0	+	0	0	.
chr8	41542994	41542995	chr8:41542995:A:G	chr8:41542995:A:G	A	G	A	SOX2_HMG_3	15	1	-	2.8884328372832955	0.045723681106436986	GATCACAGGCAGTGATG
chr8	41543009	41543010	chr8:41543010:C:T	rs561933538	C	T	C	SOX2_HMG_3	0	1	-	2.8884328372832955	2.6678385581980018	GATCACAGGCAGTGATG
chr8	41583678	41583679	chr8:41583679:T:A	rs141247285	T	A	T	SOX2_HMG_3	-17	0	+	0	0	.
chr8	41583724	41583725	chr8:41583725:G:A	rs112951504	G	A	G	SOX2_HMG_3	29	0	+	0	0	.
chr8	42112251	42112252	chr8:42112252:G:A	rs7840827	G	A	A	SOX2_HMG_3	11	1	+	3.8676370717425335	-1.4079744572698647	TTTCCATTGTAGTGATT
chr8	42180222	42180223	chr8:42180223:G:A	rs185787026	G	A	G	SOX2_HMG_3	-16	0	+	0	0	.
chr8	42196349	42196350	chr8:42196350:T:A	rs1052460553	T	A	T	SOX2_HMG_3	-8	0	+	0	0	.
chr8	42198530	42198531	chr8:42198531:C:G	rs2299609	C	G	C	SOX2_HMG_3	-11	0	+	0	0	.
chr8	46265678	46265679	chr8:46265679:G:A	rs566858923	G	A	.	SOX2_HMG_3	23	0	-	0	0	.
chr8	47261779	47261780	chr8:47261780:C:T	rs72644587	C	T	C	SOX2_HMG_3	7	1	-	6.383563386652376	3.654776266091042	AATCAATGGTATTTGAG
chr8	47430963	47430964	chr8:47430964:T:C	rs118107116	T	C	T	SOX2_HMG_3	6	1	+	4.006368329893748	-2.902386449421472	CATCAGTGTCAGTGTGT
chr8	47540232	47540233	chr8:47540233:G:A	rs62539108	G	A	G	SOX2_HMG_3	-5	0	-	0	0	.
chr8	48076471	48076472	chr8:48076472:A:T	rs76975159	A	T	A	SOX2_HMG_3	-2	0	-	0	0	.
chr8	49062761	49062762	chr8:49062762:A:T	rs1511365	A	T	A	SOX2_HMG_3	31	0	-	0	0	.
chr8	49235640	49235641	chr8:49235641:A:G	rs13260469	A	G	A	SOX2_HMG_3	5	1	+	5.673027669128424	-1.2357271101867968	GGTCAATGATGTTGAGC
chr8	49340402	49340403	chr8:49340403:C:T	rs1519835	C	T	C	SOX2_HMG_3	-11	0	-	0	0	.
chr8	50898363	50898364	chr8:50898364:G:A	rs7018008	G	A	A	SOX2_HMG_3	-9	0	+	0	0	.
chr8	51395455	51395456	chr8:51395456:A:G	rs7012913	A	G	G	SOX2_HMG_3	10	1	+	3.5494734074923016	-3.359281371822919	ATTCAATGCAAGAGAAG
chr8	51589292	51589293	chr8:51589293:G:A	rs7816231	G	A	G	SOX2_HMG_3	29	0	+	0	0	.
chr8	51935595	51935596	chr8:51935596:A:C	rs16916974	A	C	A	SOX2_HMG_3	5	1	+	3.3085872256470585	-3.600167553668161	GATGAATGTTTTTGAGA
chr8	52022018	52022019	chr8:52022019:G:A	rs268933	G	A	G	SOX2_HMG_3	18	0	+	0	0	.
chr8	52108493	52108494	chr8:52108494:T:C	rs28582357	T	C	T	SOX2_HMG_3	-13	0	-	0	0	.
chr8	52230384	52230385	chr8:52230385:T:C	rs17221900	T	C	T	SOX2_HMG_3	-5	0	+	0	0	.
chr8	52267011	52267012	chr8:52267012:A:G	rs57646775	A	G	G	SOX2_HMG_3	29	0	+	0	0	.
chr8	52833964	52833965	chr8:52833965:G:A	rs17254973	G	A	G	SOX2_HMG_3	-7	0	-	0	0	.
chr8	52855550	52855551	chr8:52855551:G:A	rs7844657	G	A	G	SOX2_HMG_3	3	1	-	8.046173342855129	1.1374185635399074	CATCAATGTAATTCAAA
chr8	53104671	53104672	chr8:53104672:C:G	rs4532612	C	G	G	SOX2_HMG_3	-17	0	+	0	0	.
chr8	53147046	53147047	chr8:53147047:G:A	rs989909308	G	A	G	SOX2_HMG_3	-13	0	-	0	0	.
chr8	53297325	53297326	chr8:53297326:T:C	rs7823007	T	C	C	SOX2_HMG_3	31	0	-	0	0	.
chr8	53582199	53582200	chr8:53582200:C:A	rs77394560	C	A	C	SOX2_HMG_3	-11	0	-	0	0	.
chr8	54172170	54172171	chr8:54172171:T:C	rs545412350	T	C	t	SOX2_HMG_3	5	1	+	3.1079080754856974	3.1079080754856974	AATCATTGGAAGTGGAG
chr8	54307473	54307474	chr8:54307474:A:G	rs111928083	A	G	A	SOX2_HMG_3	5	1	+	7.330452189686819	0.42169741037159864	GTTCAATGTTAATGAAT
chr8	54481708	54481709	chr8:54481709:T:G	rs1079005	T	G	G	SOX2_HMG_3	4	1	-	5.782212514726867	-1.1265422645883558	GATCAATGGAATGGTGG
chr8	54863167	54863168	chr8:54863168:T:G	rs536217613	T	G	T	SOX2_HMG_3	33	0	-	0	0	.
chr8	54938711	54938712	chr8:54938712:C:A	rs192265058	C	A	C	SOX2_HMG_3	-12	0	+	0	0	.
chr8	55193974	55193975	chr8:55193975:G:A	rs4416803	G	A	G	SOX2_HMG_3	-13	0	-	0	0	.
chr8	55219196	55219197	chr8:55219197:T:C	rs75752766	T	C	T	SOX2_HMG_3	16	1	-	3.5575907780278166	3.831278394418088	CAACAATGCTTTTGACA
chr8	55228638	55228639	chr8:55228639:A:G	rs13249517	A	G	A	SOX2_HMG_3	31	0	+	0	0	.
chr8	55347331	55347332	chr8:55347332:G:C	rs988297	G	C	G	SOX2_HMG_3	3	1	-	4.856550765350591	-2.052204013964629	AATCAAGTCCAGTGAGA
chr8	55415904	55415905	chr8:55415905:G:A	rs7011423	G	A	G	SOX2_HMG_3	22	0	-	0	0	.
chr8	55415935	55415936	chr8:55415936:G:A	rs7011439	G	A	A	SOX2_HMG_3	-9	0	-	0	0	.
chr8	55513256	55513257	chr8:55513257:C:T	rs2658932	C	T	C	SOX2_HMG_3	-19	0	+	0	0	.
chr8	55617799	55617800	chr8:55617800:A:T	chr8:55617800:A:T	A	T	A	SOX2_HMG_3	6	1	-	4.093428422338697	-2.8153263569765246	CATCAATGGTCTTTATA
chr8	55775961	55775962	chr8:55775962:G:A	rs75407219	G	A	G	SOX2_HMG_3	26	0	-	0	0	.
chr8	56073971	56073972	chr8:56073972:C:G	rs2976045	C	G	G	SOX2_HMG_3	27	0	-	0	0	.
chr8	56226116	56226117	chr8:56226117:T:G	rs36112366	T	G	T	SOX2_HMG_3	9	1	-	2.915779041647636	3.967684249657319	TTTCAGTGGAAGTGAGA
chr8	56270530	56270531	chr8:56270531:A:G	rs12056556	A	G	G	SOX2_HMG_3	31	0	-	0	0	.
chr8	56446953	56446954	chr8:56446954:G:A	rs114321882	G	A	G	SOX2_HMG_3	-11	0	-	0	0	.
chr8	56532689	56532690	chr8:56532690:T:A	rs2610036	T	A	A	SOX2_HMG_3	-10	0	-	0	0	.
chr8	56770909	56770910	chr8:56770910:G:A	rs353748	G	A	G	SOX2_HMG_3	-11	0	+	0	0	.
chr8	57061839	57061840	chr8:57061840:G:A	rs60074804	G	A	.	SOX2_HMG_3	34	0	-	0	0	.
chr8	57424876	57424877	chr8:57424877:G:A	rs115898843	G	A	G	SOX2_HMG_3	27	0	-	0	0	.
chr8	57513947	57513948	chr8:57513948:C:G	rs114555710	C	G	C	SOX2_HMG_3	22	0	-	0	0	.
chr8	57995629	57995630	chr8:57995630:G:A	rs140568565	G	A	G	SOX2_HMG_3	29	0	+	0	0	.
chr8	58196129	58196130	chr8:58196130:A:C	chr8:58196130:A:C	A	C	A	SOX2_HMG_3	17	0	+	0	0	.
chr8	58282357	58282358	chr8:58282358:C:T	rs7007933	C	T	C	SOX2_HMG_3	19	0	+	0	0	.
chr8	58310035	58310036	chr8:58310036:G:A	rs10109576	G	A	G	SOX2_HMG_3	18	0	-	0	0	.
chr8	58310063	58310064	chr8:58310064:C:A	rs10109389	C	A	A	SOX2_HMG_3	-10	0	-	0	0	.
chr8	58324233	58324234	chr8:58324234:T:G	rs7818992	T	G	T	SOX2_HMG_3	34	0	-	0	0	.
chr8	58543310	58543311	chr8:58543311:G:T	rs76362468	G	T	G	SOX2_HMG_3	34	0	+	0	0	.
chr8	58554277	58554278	chr8:58554278:T:C	rs116375470	T	C	T	SOX2_HMG_3	25	0	-	0	0	.
chr8	58554290	58554291	chr8:58554291:A:C	rs115850654	A	C	A	SOX2_HMG_3	12	1	-	6.525935460747622	-0.38281931856759854	AATCAATTTAATTTAAA
chr8	58594721	58594722	chr8:58594722:A:G	rs997905057	A	G	A	SOX2_HMG_3	23	0	-	0	0	.
chr8	58666356	58666357	chr8:58666357:G:A	rs731685	G	A	G	SOX2_HMG_3	32	0	+	0	0	.
chr8	58805423	58805424	chr8:58805424:T:C	rs62505114	T	C	T	SOX2_HMG_3	-3	0	+	0	0	.
chr8	58880218	58880219	chr8:58880219:C:T	rs2726556	C	T	T	SOX2_HMG_3	-20	0	+	0	0	.
chr8	58880240	58880241	chr8:58880241:A:G	rs2726557	A	G	G	SOX2_HMG_3	2	1	+	4.1359645190076435	4.1359645190076435	AGACAATGGCATTGCAG
chr8	59148060	59148061	chr8:59148061:A:G	rs16924675	A	G	A	SOX2_HMG_3	-8	0	-	0	0	.
chr8	59594999	59595000	chr8:59595000:C:G	rs113869061	C	G	C	SOX2_HMG_3	-6	0	+	0	0	.
chr8	59709526	59709527	chr8:59709527:A:T	rs7834153	A	T	T	SOX2_HMG_3	32	0	+	0	0	.
chr8	59759466	59759467	chr8:59759467:C:T	rs7821280	C	T	T	SOX2_HMG_3	-1	0	+	0	0	.
chr8	59968098	59968099	chr8:59968099:A:C	rs601224	A	C	A	SOX2_HMG_3	-20	0	+	0	0	.
chr8	60396638	60396639	chr8:60396639:A:G	rs10504312	A	G	G	SOX2_HMG_3	-10	0	-	0	0	.
chr8	60643865	60643866	chr8:60643866:T:G	rs7822621	T	G	G	SOX2_HMG_3	-16	0	-	0	0	.
chr8	60762901	60762902	chr8:60762902:G:A	rs7823484	G	A	A	SOX2_HMG_3	35	0	+	0	0	.
chr8	60777976	60777977	chr8:60777977:A:G	rs979995729	A	G	A	SOX2_HMG_3	-14	0	+	0	0	.
chr8	60852348	60852349	chr8:60852349:C:G	rs118161607	C	G	C	SOX2_HMG_3	18	0	+	0	0	.
chr8	60961938	60961939	chr8:60961939:T:C	rs10086776	T	C	T	SOX2_HMG_3	27	0	-	0	0	.
chr8	61022534	61022535	chr8:61022535:A:T	rs10100462	A	T	A	SOX2_HMG_3	-5	0	+	0	0	.
chr8	61037697	61037698	chr8:61037698:A:C	rs1545006	A	C	C	SOX2_HMG_3	18	0	+	0	0	.
chr8	61238581	61238582	chr8:61238582:C:T	rs76131178	C	T	C	SOX2_HMG_3	1	1	+	5.870221745548885	5.870221745548885	TCTCAATTCAAGTGACA
chr8	61376064	61376065	chr8:61376065:G:A	rs76772375	G	A	A	SOX2_HMG_3	-18	0	+	0	0	.
chr8	61591467	61591468	chr8:61591468:C:G	rs113487937	C	G	C	SOX2_HMG_3	-1	0	-	0	0	.
chr8	61825907	61825908	chr8:61825908:T:C	rs993792	T	C	T	SOX2_HMG_3	9	1	+	7.6560494858013985	6.849379351864352	GATAAATGATATTGTTT
chr8	61843066	61843067	chr8:61843067:C:A	rs775132000	C	A	C	SOX2_HMG_3	-12	0	-	0	0	.
chr8	62039124	62039125	chr8:62039125:C:A	rs11998202	C	A	C	SOX2_HMG_3	17	0	-	0	0	.
chr8	62286681	62286682	chr8:62286682:T:C	rs55737753	T	C	t	SOX2_HMG_3	-13	0	-	0	0	.
chr8	62350988	62350989	chr8:62350989:C:T	rs13282612	C	T	c	SOX2_HMG_3	32	0	-	0	0	.
chr8	62440153	62440154	chr8:62440154:T:A	rs16928922	T	A	T	SOX2_HMG_3	5	1	-	6.06516615762354	-0.8435886216916808	AATCAATGTTAGAGGTA
chr8	62472645	62472646	chr8:62472646:G:T	rs34558126	G	T	G	SOX2_HMG_3	19	0	+	0	0	.
chr8	62488008	62488009	chr8:62488009:C:T	rs10091239	C	T	T	SOX2_HMG_3	-2	0	+	0	0	.
chr8	62598436	62598437	chr8:62598437:T:A	rs7844749	T	A	A	SOX2_HMG_3	-3	0	+	0	0	.
chr8	62699366	62699367	chr8:62699367:G:T	rs4738995	G	T	G	SOX2_HMG_3	33	0	+	0	0	.
chr8	63389568	63389569	chr8:63389569:T:C	rs6981563	T	C	T	SOX2_HMG_3	-15	0	-	0	0	.
chr8	64034995	64034996	chr8:64034996:G:C	rs1426038444	G	C	G	SOX2_HMG_3	19	0	-	0	0	.
chr8	64168561	64168562	chr8:64168562:A:G	rs2356341	A	G	G	SOX2_HMG_3	-11	0	+	0	0	.
chr8	64283320	64283321	chr8:64283321:C:T	rs77673968	C	T	C	SOX2_HMG_3	2	1	+	5.425849237112299	10.429221307427884	AACCAATGTTTTTGAAA
chr8	64364887	64364888	chr8:64364888:T:G	rs114322169	T	G	T	SOX2_HMG_3	-7	0	-	0	0	.
chr8	64806774	64806775	chr8:64806775:C:A	rs138850919	C	A	C	SOX2_HMG_3	-9	0	-	0	0	.
chr8	64955802	64955803	chr8:64955803:G:A	rs12156257	G	A	c	SOX2_HMG_3	-7	0	+	0	0	.
chr8	65183259	65183260	chr8:65183260:G:T	rs7000812	G	T	G	SOX2_HMG_3	33	0	+	0	0	.
chr8	65189952	65189953	chr8:65189953:G:A	rs72658989	G	A	G	SOX2_HMG_3	18	0	+	0	0	.
chr8	65643971	65643972	chr8:65643972:G:A	rs118185709	G	A	G	SOX2_HMG_3	14	1	+	3.262679110208788	7.444556727509908	GATCAATTGCAATGGGA
chr8	66113970	66113971	chr8:66113971:G:A	rs149784744	G	A	G	SOX2_HMG_3	31	0	+	0	0	.
chr8	66113971	66113972	chr8:66113972:G:A	rs144653944	G	A	G	SOX2_HMG_3	32	0	+	0	0	.
chr8	66459598	66459599	chr8:66459599:T:A	rs890515	T	A	A	SOX2_HMG_3	26	0	-	0	0	.
chr8	66463765	66463766	chr8:66463766:G:C	rs78348791	G	C	G	SOX2_HMG_3	-3	0	+	0	0	.
chr8	66531380	66531381	chr8:66531381:A:G	chr8:66531381:A:G	A	G	A	SOX2_HMG_3	1	1	+	4.034272115136983	2.2026245250576917	TAGCAATAGTATTGGAC
chr8	67377419	67377420	chr8:67377420:G:A	rs80189252	G	A	G	SOX2_HMG_3	25	0	+	0	0	.
chr8	67627167	67627168	chr8:67627168:T:C	rs7814911	T	C	T	SOX2_HMG_3	9	1	+	7.0749413984937615	6.268271264556715	AGTAAATTATATTGATG
chr8	67792218	67792219	chr8:67792219:C:T	rs76518199	C	T	C	SOX2_HMG_3	-9	0	+	0	0	.
chr8	67792225	67792226	chr8:67792226:T:G	chr8:67792226:T:G	T	G	T	SOX2_HMG_3	-2	0	+	0	0	.
chr8	68010034	68010035	chr8:68010035:G:A	rs13274293	G	A	g	SOX2_HMG_3	-19	0	-	0	0	.
chr8	68612177	68612178	chr8:68612178:C:T	rs16934777	C	T	C	SOX2_HMG_3	29	0	-	0	0	.
chr8	68731896	68731897	chr8:68731897:T:C	rs16934973	T	C	T	SOX2_HMG_3	5	1	+	1.399709731354293	1.399709731354293	GATCATTGGGATTGGTG
chr8	69095369	69095370	chr8:69095370:A:G	rs2912523	A	G	G	SOX2_HMG_3	29	0	-	0	0	.
chr8	69116740	69116741	chr8:69116741:G:A	rs2472137	G	A	G	SOX2_HMG_3	33	0	+	0	0	.
chr8	69464291	69464292	chr8:69464292:G:C	rs2704027	G	C	G	SOX2_HMG_3	22	0	+	0	0	.
chr8	69569182	69569183	chr8:69569183:G:A	rs73293332	G	A	G	SOX2_HMG_3	-2	0	-	0	0	.
chr8	69597247	69597248	chr8:69597248:C:T	rs150410715	C	T	C	SOX2_HMG_3	34	0	-	0	0	.
chr8	69644116	69644117	chr8:69644117:G:A	rs112755651	G	A	G	SOX2_HMG_3	32	0	-	0	0	.
chr8	69644119	69644120	chr8:69644120:G:C	rs16919163	G	C	C	SOX2_HMG_3	29	0	-	0	0	.
chr8	69644128	69644129	chr8:69644129:T:C	rs16919165	T	C	T	SOX2_HMG_3	20	0	-	0	0	.
chr8	69705926	69705927	chr8:69705927:T:C	rs918004551	T	C	T	SOX2_HMG_3	6	1	+	5.5019205244141425	-1.40683425490108	AATCAATTCCATTCTTG
chr8	70099721	70099722	chr8:70099722:T:C	rs3892266	T	C	C	SOX2_HMG_3	31	0	-	0	0	.
chr8	70273509	70273510	chr8:70273510:A:G	rs2290878	A	G	A	SOX2_HMG_3	26	0	-	0	0	.
chr8	70465794	70465795	chr8:70465795:T:G	rs10111857	T	G	G	SOX2_HMG_3	14	1	-	4.883576126813001	-1.9487225787536917	CTTCACTGCTAGTGAAG
chr8	70666282	70666283	chr8:70666283:A:C	rs11987501	A	C	a	SOX2_HMG_3	12	1	-	5.99092726808446	-0.9178275112307608	TCTCAATGATAATGAAA
chr8	71131152	71131153	chr8:71131153:G:A	rs888857400	G	A	G	SOX2_HMG_3	21	0	-	0	0	.
chr8	71176012	71176013	chr8:71176013:G:C	rs72652101	G	C	G	SOX2_HMG_3	-4	0	-	0	0	.
chr8	71278995	71278996	chr8:71278996:A:G	rs13254654	A	G	A	SOX2_HMG_3	36	0	-	0	0	.
chr8	71279049	71279050	chr8:71279050:C:T	rs16937550	C	T	C	SOX2_HMG_3	-18	0	-	0	0	.
chr8	71280614	71280615	chr8:71280615:C:T	rs116318425	C	T	C	SOX2_HMG_3	29	0	+	0	0	.
chr8	71604206	71604207	chr8:71604207:T:C	rs77331111	T	C	T	SOX2_HMG_3	-12	0	-	0	0	.
chr8	71696939	71696940	chr8:71696940:C:T	rs34554315	C	T	C	SOX2_HMG_3	13	1	-	5.517013422476605	-1.3917413568386163	TATCAATGACAATGGTG
chr8	71740831	71740832	chr8:71740832:T:C	rs9657037	T	C	C	SOX2_HMG_3	-13	0	+	0	0	.
chr8	72144449	72144450	chr8:72144450:A:G	rs4415362	A	G	A	SOX2_HMG_3	5	1	+	4.170327144297435	-2.7384276350177847	AGTCAACTTCAGTGAGG
chr8	72651790	72651791	chr8:72651791:A:G	rs1440341	A	G	G	SOX2_HMG_3	2	1	-	10.427973963344886	5.4246018930292985	TTTCAATGTTATTGTAT
chr8	72810566	72810567	chr8:72810567:G:A	rs10957619	G	A	g	SOX2_HMG_3	5	1	-	2.5893351387341905	2.5893351387341905	GGACACTGGCAGTGAAA
chr8	73090834	73090835	chr8:73090835:C:G	rs72655857	C	G	C	SOX2_HMG_3	-14	0	-	0	0	.
chr8	73588193	73588194	chr8:73588194:G:A	rs73328776	G	A	G	SOX2_HMG_3	-13	0	+	0	0	.
chr8	73757512	73757513	chr8:73757513:G:C	rs182396688	G	C	G	SOX2_HMG_3	17	0	-	0	0	.
chr8	73877720	73877721	chr8:73877721:G:A	rs138836581	G	A	G	SOX2_HMG_3	29	0	-	0	0	.
chr8	73878803	73878804	chr8:73878804:T:C	rs1393262155	T	C	T	SOX2_HMG_3	14	1	-	3.493235849369124	-0.6886417679319955	CGTCAATGCAGGTGAGA
chr8	73878837	73878838	chr8:73878838:C:G	rs540097389	C	G	C	SOX2_HMG_3	-20	0	-	0	0	.
chr8	74106149	74106150	chr8:74106150:A:G	rs17326309	A	G	a	SOX2_HMG_3	10	1	+	7.344017124881521	0.4352623455663004	CAGCAATGCAATTGTGG
chr8	74292789	74292790	chr8:74292790:T:A	rs76979198	T	A	T	SOX2_HMG_3	-9	0	+	0	0	.
chr8	74601595	74601596	chr8:74601596:G:T	rs6472867	G	T	G	SOX2_HMG_3	-4	0	-	0	0	.
chr8	74693605	74693606	chr8:74693606:G:C	rs13270723	G	C	G	SOX2_HMG_3	16	1	+	2.5664002840646996	0.5665577891481559	AATCAGTGCTATTGCGG
chr8	74778901	74778902	chr8:74778902:T:C	rs6472875	T	C	C	SOX2_HMG_3	-8	0	-	0	0	.
chr8	75814511	75814512	chr8:75814512:C:G	rs2977343	C	G	C	SOX2_HMG_3	-18	0	+	0	0	.
chr8	75924186	75924187	chr8:75924187:C:T	rs117497138	C	T	C	SOX2_HMG_3	0	1	+	4.545141057378807	4.407812079330143	CGTCAGTGCCAGTGAGA
chr8	75924187	75924188	chr8:75924188:G:A	rs76295277	G	A	G	SOX2_HMG_3	1	1	+	4.545141057378807	6.376788647458098	CGTCAGTGCCAGTGAGA
chr8	76262581	76262582	chr8:76262582:A:G	rs115021606	A	G	A	SOX2_HMG_3	31	0	-	0	0	.
chr8	76334105	76334106	chr8:76334106:T:G	rs10156271	T	G	G	SOX2_HMG_3	2	1	+	5.92082952178569	2.0532146871076478	GGTCAATTGCAGTCATG
chr8	76530212	76530213	chr8:76530213:C:T	rs577418164	C	T	C	SOX2_HMG_3	-2	0	-	0	0	.
chr8	76674299	76674300	chr8:76674300:A:C	chr8:76674300:A:C	A	C	A	SOX2_HMG_3	18	0	-	0	0	.
chr8	76855560	76855561	chr8:76855561:C:T	rs16939379	C	T	C	SOX2_HMG_3	-2	0	-	0	0	.
chr8	77131553	77131554	chr8:77131554:T:C	rs17449553	T	C	T	SOX2_HMG_3	28	0	-	0	0	.
chr8	77300161	77300162	chr8:77300162:A:G	rs116658464	A	G	A	SOX2_HMG_3	35	0	-	0	0	.
chr8	77483916	77483917	chr8:77483917:G:A	rs13257595	G	A	G	SOX2_HMG_3	36	0	+	0	0	.
chr8	77767159	77767160	chr8:77767160:A:G	rs7827238	A	G	A	SOX2_HMG_3	-2	0	-	0	0	.
chr8	77779599	77779600	chr8:77779600:A:G	rs28572159	A	G	A	SOX2_HMG_3	12	1	-	7.771376444941801	0.8626216656265802	TATAAATGGAATTGAAA
chr8	77821465	77821466	chr8:77821466:T:C	rs2339076	T	C	C	SOX2_HMG_3	-19	0	+	0	0	.
chr8	78466592	78466593	chr8:78466593:T:C	rs10085999	T	C	C	SOX2_HMG_3	26	0	-	0	0	.
chr8	78646120	78646121	chr8:78646121:C:G	rs62517750	C	G	C	SOX2_HMG_3	-2	0	+	0	0	.
chr8	78986559	78986560	chr8:78986560:G:A	rs639261	G	A	G	SOX2_HMG_3	27	0	-	0	0	.
chr8	79213790	79213791	chr8:79213791:T:A	rs1380638	T	A	T	SOX2_HMG_3	11	1	+	6.804391716183258	0.11170021795091034	AGTCAAGGACATTGAAA
chr8	79636589	79636590	chr8:79636590:A:G	rs17452334	A	G	A	SOX2_HMG_3	14	1	-	4.418810357777724	0.2992854970253244	GATCAATTGCATAGTAT
chr8	79751072	79751073	chr8:79751073:A:G	rs2461043	A	G	g	SOX2_HMG_3	-1	0	+	0	0	.
chr8	79802443	79802444	chr8:79802444:C:A	rs2247009	C	A	C	SOX2_HMG_3	-8	0	+	0	0	.
chr8	79952413	79952414	chr8:79952414:A:G	rs12675564	A	G	G	SOX2_HMG_3	26	0	+	0	0	.
chr8	80757985	80757986	chr8:80757986:T:C	rs73692128	T	C	T	SOX2_HMG_3	5	1	-	3.1523224102667124	-3.756432369048507	CTTCAATTACAGTCATG
chr8	81004739	81004740	chr8:81004740:A:G	rs920984	A	G	G	SOX2_HMG_3	-7	0	+	0	0	.
chr8	81079113	81079114	chr8:81079114:T:C	rs4515498	T	C	T	SOX2_HMG_3	-13	0	-	0	0	.
chr8	81108464	81108465	chr8:81108465:A:G	rs4377918	A	G	G	SOX2_HMG_3	8	1	+	4.0246659962635825	4.873709943627212	GAGCATTTATATTGAAG
chr8	81187268	81187269	chr8:81187269:T:C	rs115293527	T	C	T	SOX2_HMG_3	12	1	+	4.330216569064053	-2.5785382102511663	GGGCAATAGCAGTGTAG
chr8	81489444	81489445	chr8:81489445:G:A	rs16909233	G	A	G	SOX2_HMG_3	15	1	+	5.65845183526754	6.09092541681844	TTTAAATGGCATTGAGG
chr8	81652966	81652967	chr8:81652967:A:G	rs2142316	A	G	G	SOX2_HMG_3	5	1	+	5.107645771692591	-1.8011090076226297	AGTCAATAGAATGGATA
chr8	81745497	81745498	chr8:81745498:A:G	rs148698659	A	G	A	SOX2_HMG_3	-7	0	+	0	0	.
chr8	81913278	81913279	chr8:81913279:C:A	rs4610705	C	A	C	SOX2_HMG_3	-8	0	+	0	0	.
chr8	81913320	81913321	chr8:81913321:T:G	rs765755	T	G	T	SOX2_HMG_3	34	0	+	0	0	.
chr8	82674646	82674647	chr8:82674647:C:T	rs35258328	C	T	T	SOX2_HMG_3	32	0	-	0	0	.
chr8	82674691	82674692	chr8:82674692:C:T	rs34289964	C	T	C	SOX2_HMG_3	-13	0	-	0	0	.
chr8	82839021	82839022	chr8:82839022:A:G	rs67048258	A	G	A	SOX2_HMG_3	16	1	-	5.5997500658130255	4.402978012672672	AAGCAATGTTCTTGAGT
chr8	82842027	82842028	chr8:82842028:T:C	rs1997056	T	C	T	SOX2_HMG_3	-17	0	+	0	0	.
chr8	84180885	84180886	chr8:84180886:A:C	rs1550215	A	C	.	SOX2_HMG_3	-7	0	+	0	0	.
chr8	84742642	84742643	chr8:84742643:T:C	rs11988092	T	C	C	SOX2_HMG_3	-7	0	+	0	0	.
chr8	84900856	84900857	chr8:84900857:C:A	rs1427069	C	A	C	SOX2_HMG_3	-4	0	+	0	0	.
chr8	84900874	84900875	chr8:84900875:T:C	rs1346289	T	C	T	SOX2_HMG_3	14	1	+	4.389611605806666	0.27008674505426655	AATCAAGACTATTGTAG
chr8	84949007	84949008	chr8:84949008:G:C	rs9693371	G	C	c	SOX2_HMG_3	32	0	-	0	0	.
chr8	84949054	84949055	chr8:84949055:A:T	rs12542468	A	T	a	SOX2_HMG_3	-15	0	-	0	0	.
chr8	85236181	85236182	chr8:85236182:T:C	rs7827175	T	C	T	SOX2_HMG_3	5	1	-	4.548746913211338	-2.3600078661038846	AGTCAATGTCATTCTAT
chr8	86512778	86512779	chr8:86512779:T:C	rs35154764	T	C	T	SOX2_HMG_3	-13	0	-	0	0	.
chr8	87428244	87428245	chr8:87428245:A:G	rs16868510	A	G	A	SOX2_HMG_3	1	1	+	2.4175425091503273	0.5858949190710364	AATGAATGGCTTTGAGG
chr8	87428264	87428265	chr8:87428265:A:C	rs9297322	A	C	C	SOX2_HMG_3	21	0	+	0	0	.
chr8	87696429	87696430	chr8:87696430:G:A	rs12543694	G	A	G	SOX2_HMG_3	29	0	-	0	0	.
chr8	88871654	88871655	chr8:88871655:A:G	chr8:88871655:A:G	A	G	A	SOX2_HMG_3	21	0	-	0	0	.
chr8	89001887	89001888	chr8:89001888:A:G	rs2464701	A	G	A	SOX2_HMG_3	-8	0	+	0	0	.
chr8	89043705	89043706	chr8:89043706:A:G	rs74382089	A	G	A	SOX2_HMG_3	-7	0	+	0	0	.
chr8	89322846	89322847	chr8:89322847:A:C	rs16894311	A	C	A	SOX2_HMG_3	32	0	-	0	0	.
chr8	89721042	89721043	chr8:89721043:T:C	rs35489404	T	C	T	SOX2_HMG_3	-13	0	+	0	0	.
chr8	89799761	89799762	chr8:89799762:G:C	rs40635	G	C	G	SOX2_HMG_3	33	0	-	0	0	.
chr8	91037743	91037744	chr8:91037744:C:T	rs12545269	C	T	C	SOX2_HMG_3	26	0	+	0	0	.
chr8	91198017	91198018	chr8:91198018:T:A	rs6987417	T	A	T	SOX2_HMG_3	-16	0	+	0	0	.
chr8	91657091	91657092	chr8:91657092:T:C	chr8:91657092:T:C	T	C	T	SOX2_HMG_3	12	1	+	6.794457093230358	-0.11429768608486257	ATTCAATGGTGTTGATC
chr8	91657101	91657102	chr8:91657102:C:G	chr8:91657102:C:G	C	G	C	SOX2_HMG_3	22	0	+	0	0	.
chr8	91867025	91867026	chr8:91867026:C:T	rs735288	C	T	C	SOX2_HMG_3	31	0	-	0	0	.
chr8	92479064	92479065	chr8:92479065:A:C	rs4734231	A	C	A	SOX2_HMG_3	14	1	-	9.374060078205796	7.9049563057189705	TTTCAATGCTAGTGTTT
chr8	92501457	92501458	chr8:92501458:C:T	rs72675535	C	T	C	SOX2_HMG_3	8	1	+	3.5262790189929336	4.398015371628796	GTTCAATGCCATGGTAG
chr8	92632527	92632528	chr8:92632528:C:T	rs13438957	C	T	C	SOX2_HMG_3	19	0	-	0	0	.
chr8	93017076	93017077	chr8:93017077:T:C	rs1974945	T	C	T	SOX2_HMG_3	-6	0	-	0	0	.
chr8	93020514	93020515	chr8:93020515:G:T	rs2339774	G	T	T	SOX2_HMG_3	-7	0	+	0	0	.
chr8	93260364	93260365	chr8:93260365:C:T	rs67685130	C	T	T	SOX2_HMG_3	-1	0	+	0	0	.
chr8	93260395	93260396	chr8:93260396:C:T	rs13261155	C	T	C	SOX2_HMG_3	30	0	+	0	0	.
chr8	93347453	93347454	chr8:93347454:G:A	rs60212314	G	A	G	SOX2_HMG_3	13	1	+	4.242505673966157	-2.666249105349064	AGGCAAGGGAATTGATG
chr8	93890335	93890336	chr8:93890336:A:G	rs118151775	A	G	A	SOX2_HMG_3	34	0	-	0	0	.
chr8	94200244	94200245	chr8:94200245:G:C	rs755637547	G	C	G	SOX2_HMG_3	33	0	-	0	0	.
chr8	94206387	94206388	chr8:94206388:G:A	rs1161659946	G	A	G	SOX2_HMG_3	-17	0	+	0	0	.
chr8	94206425	94206426	chr8:94206426:A:G	rs9643341	A	G	A	SOX2_HMG_3	21	0	+	0	0	.
chr8	94266464	94266465	chr8:94266465:G:A	rs188513003	G	A	G	SOX2_HMG_3	-9	0	+	0	0	.
chr8	94686385	94686386	chr8:94686386:C:T	rs12543514	C	T	T	SOX2_HMG_3	3	1	+	2.7902524679241463	-4.118502311391074	AATCAATGTCTTTGCAA
chr8	94904859	94904860	chr8:94904860:C:T	rs4570121	C	T	C	SOX2_HMG_3	1	1	-	3.0282869653922613	4.859934555471552	AGGCAATGACAGTTATG
chr8	94953589	94953590	chr8:94953590:C:T	rs72676996	C	T	C	SOX2_HMG_3	13	1	-	2.184676982823416	-4.7240777964918035	TATCAGTGTGAGTGAAG
chr8	95366624	95366625	chr8:95366625:G:A	rs16917502	G	A	G	SOX2_HMG_3	18	0	-	0	0	.
chr8	95376919	95376920	chr8:95376920:G:C	rs28545626	G	C	G	SOX2_HMG_3	17	0	+	0	0	.
chr8	95520396	95520397	chr8:95520397:T:G	rs1500906	T	G	G	SOX2_HMG_3	20	0	+	0	0	.
chr8	95893043	95893044	chr8:95893044:A:G	rs74720900	A	G	A	SOX2_HMG_3	-2	0	-	0	0	.
chr8	96173193	96173194	chr8:96173194:T:C	rs1169103822	T	C	T	SOX2_HMG_3	21	0	+	0	0	.
chr8	96617677	96617678	chr8:96617678:G:A	rs10955078	G	A	A	SOX2_HMG_3	25	0	+	0	0	.
chr8	97119530	97119531	chr8:97119531:T:G	rs67964310	T	G	G	SOX2_HMG_3	8	1	-	7.656049485801397	7.770825000393826	GATCAATGATTTTGTTT
chr8	97471193	97471194	chr8:97471194:T:C	rs7004977	T	C	T	SOX2_HMG_3	-5	0	+	0	0	.
chr8	97812651	97812652	chr8:97812652:T:C	rs10504979	T	C	T	SOX2_HMG_3	-17	0	-	0	0	.
chr8	97940597	97940598	chr8:97940598:C:T	rs2512024	C	T	C	SOX2_HMG_3	-5	0	+	0	0	.
chr8	98245958	98245959	chr8:98245959:G:A	rs17288024	G	A	G	SOX2_HMG_3	11	1	+	5.060223777905697	-0.21538775110670205	AATCAATGTCCGTGTGA
chr8	98358710	98358711	chr8:98358711:G:C	rs116914733	G	C	A	SOX2_HMG_3	-14	0	+	0	0	.
chr8	98471162	98471163	chr8:98471163:G:A	rs16897031	G	A	g	SOX2_HMG_3	13	1	+	6.330470049347399	-0.5782847299678218	GATCAATGGTATCGGAA
chr8	98807665	98807666	chr8:98807666:G:C	rs2442015	G	C	G	SOX2_HMG_3	-7	0	-	0	0	.
chr8	99024814	99024815	chr8:99024815:C:A	rs78791374	C	A	C	SOX2_HMG_3	32	0	-	0	0	.
chr8	100038795	100038796	chr8:100038796:C:A	rs930965	C	A	A	SOX2_HMG_3	30	0	-	0	0	.
chr8	100307767	100307768	chr8:100307768:C:T	rs1788167	C	T	T	SOX2_HMG_3	7	1	-	3.759408159453471	1.030621038892136	TTTGAATGTAAGTGAAG
chr8	100324645	100324646	chr8:100324646:C:T	rs2439456	C	T	C	SOX2_HMG_3	-10	0	-	0	0	.
chr8	100745547	100745548	chr8:100745548:C:T	rs111395916	C	T	C	SOX2_HMG_3	32	0	-	0	0	.
chr8	100835870	100835871	chr8:100835871:A:C	rs76113913	A	C	A	SOX2_HMG_3	-3	0	+	0	0	.
chr8	100846421	100846422	chr8:100846422:G:A	rs79678804	G	A	G	SOX2_HMG_3	-17	0	+	0	0	.
chr8	100925145	100925146	chr8:100925146:A:G	rs3105460	A	G	a	SOX2_HMG_3	-10	0	+	0	0	.
chr8	101071223	101071224	chr8:101071224:A:G	rs737707	A	G	A	SOX2_HMG_3	5	1	+	5.783306242377057	-1.1254485369381635	GATCAATTCCAGTAAAG
chr8	101239928	101239929	chr8:101239929:A:G	rs16899127	A	G	G	SOX2_HMG_3	21	0	-	0	0	.
chr8	101345453	101345454	chr8:101345454:A:G	rs13276679	A	G	G	SOX2_HMG_3	14	1	+	4.250171517302474	0.0682939000013546	GTCCAATTCCAGTGAGG
chr8	101500157	101500158	chr8:101500158:T:A	rs487053	T	A	T	SOX2_HMG_3	2	1	+	2.8920325294441516	-0.9755823052338888	GATAAAGGGTAGTGATT
chr8	101602205	101602206	chr8:101602206:A:G	rs7821380	A	G	A	SOX2_HMG_3	9	1	-	7.003623211775572	6.196953077838527	AATCAATGATATTTTAG
chr8	101952521	101952522	chr8:101952522:A:C	rs16868791	A	C	A	SOX2_HMG_3	0	1	+	4.084840555194191	3.560367932568161	AATCATTTCCAGTGTTG
chr8	102238214	102238215	chr8:102238215:C:G	rs28999671	C	G	G	SOX2_HMG_3	22	0	-	0	0	.
chr8	102243716	102243717	chr8:102243717:G:A	rs2853232	G	A	A	SOX2_HMG_3	-18	0	+	0	0	.
chr8	102486088	102486089	chr8:102486089:T:C	rs7002717	T	C	C	SOX2_HMG_3	-2	0	-	0	0	.
chr8	102550522	102550523	chr8:102550523:T:A	rs11990360	T	A	T	SOX2_HMG_3	7	1	-	3.2353093489633733	3.9193859647911724	GGACAATAGTAGTGGGG
chr8	102584201	102584202	chr8:102584202:G:A	rs545477396	G	A	G	SOX2_HMG_3	13	1	+	3.7411764119979782	-3.167578367317242	TAAAAATGTTATTGAGC
chr8	102590501	102590502	chr8:102590502:G:T	rs753754099	G	T	G	SOX2_HMG_3	-17	0	-	0	0	.
chr8	102653667	102653668	chr8:102653668:T:C	rs190680917	T	C	T	SOX2_HMG_3	5	1	-	5.955223619482351	-0.9535311598328695	ATGCAATTATATTGTTA
chr8	102657257	102657258	chr8:102657258:C:A	rs72685128	C	A	C	SOX2_HMG_3	-16	0	+	0	0	.
chr8	102790530	102790531	chr8:102790531:C:T	rs62522569	C	T	C	SOX2_HMG_3	-15	0	+	0	0	.
chr8	102956766	102956767	chr8:102956767:T:A	rs76798148	T	A	T	SOX2_HMG_3	16	1	-	3.549784393358242	3.020401567972323	CCTCAATTCTATAGAGA
chr8	102987836	102987837	chr8:102987837:C:A	rs2513874	C	A	C	SOX2_HMG_3	33	0	+	0	0	.
chr8	103151693	103151694	chr8:103151694:T:C	rs28672985	T	C	T	SOX2_HMG_3	23	0	+	0	0	.
chr8	103203427	103203428	chr8:103203428:G:A	rs78651620	G	A	G	SOX2_HMG_3	33	0	-	0	0	.
chr8	103343976	103343977	chr8:103343977:G:T	rs827579	G	T	G	SOX2_HMG_3	-7	0	+	0	0	.
chr8	103524671	103524672	chr8:103524672:A:G	rs10099408	A	G	A	SOX2_HMG_3	22	0	-	0	0	.
chr8	103568922	103568923	chr8:103568923:T:C	rs10505045	T	C	T	SOX2_HMG_3	5	1	-	2.9400078671687937	-3.968746912146426	TTGCAATGCCACTGATG
chr8	103647360	103647361	chr8:103647361:A:G	rs117900220	A	G	A	SOX2_HMG_3	15	1	-	4.51671584528825	1.6740066891113907	GGCCAATGTCCTTGATG
chr8	103902656	103902657	chr8:103902657:T:C	rs10091132	T	C	T	SOX2_HMG_3	20	0	+	0	0	.
chr8	103902668	103902669	chr8:103902669:A:G	rs13258713	A	G	A	SOX2_HMG_3	32	0	+	0	0	.
chr8	104210777	104210778	chr8:104210778:A:T	rs977335	A	T	T	SOX2_HMG_3	10	1	-	4.549707388543358	11.458462167858578	GGTCAATTTCTGTGAAA
chr8	104273602	104273603	chr8:104273603:T:A	rs2441826	T	A	A	SOX2_HMG_3	-20	0	-	0	0	.
chr8	104362187	104362188	chr8:104362188:A:G	rs2669445	A	G	G	SOX2_HMG_3	-10	0	+	0	0	.
chr8	104587742	104587743	chr8:104587743:C:T	rs72679149	C	T	C	SOX2_HMG_3	-15	0	+	0	0	.
chr8	104587772	104587773	chr8:104587773:C:T	rs78097477	C	T	C	SOX2_HMG_3	15	1	+	3.2224570014466813	6.06516615762354	AATCAATGTTTGTGGCA
chr8	104678937	104678938	chr8:104678938:A:G	rs193024976	A	G	A	SOX2_HMG_3	-13	0	-	0	0	.
chr8	104800182	104800183	chr8:104800183:G:C	rs4734819	G	C	G	SOX2_HMG_3	-11	0	-	0	0	.
chr8	104831162	104831163	chr8:104831163:A:G	rs13279244	A	G	G	SOX2_HMG_3	-11	0	-	0	0	.
chr8	105076973	105076974	chr8:105076974:T:C	rs2956785	T	C	T	SOX2_HMG_3	-18	0	+	0	0	.
chr8	105145934	105145935	chr8:105145935:G:A	rs73306402	G	A	G	SOX2_HMG_3	-5	0	+	0	0	.
chr8	105464789	105464790	chr8:105464790:G:T	rs33916644	G	T	G	SOX2_HMG_3	-2	0	+	0	0	.
chr8	105569299	105569300	chr8:105569300:A:T	rs6993770	A	T	A	SOX2_HMG_3	-14	0	-	0	0	.
chr8	106087303	106087304	chr8:106087304:A:G	rs148078989	A	G	A	SOX2_HMG_3	29	0	-	0	0	.
chr8	106331032	106331033	chr8:106331033:A:G	rs7834655	A	G	G	SOX2_HMG_3	-10	0	+	0	0	.
chr8	106571443	106571444	chr8:106571444:T:C	rs80349040	T	C	T	SOX2_HMG_3	34	0	-	0	0	.
chr8	106629518	106629519	chr8:106629519:A:G	rs57623085	A	G	A	SOX2_HMG_3	24	0	-	0	0	.
chr8	106657148	106657149	chr8:106657149:A:G	rs73699978	A	G	A	SOX2_HMG_3	34	0	-	0	0	.
chr8	106726058	106726059	chr8:106726059:T:G	rs376876409	T	G	T	SOX2_HMG_3	2	1	+	3.221831011518831	-0.6457838231592099	TATCATTGCTATGGATA
chr8	106726066	106726067	chr8:106726067:A:G	rs757287230	A	G	A	SOX2_HMG_3	10	1	+	3.221831011518831	-3.6869237677963893	TATCATTGCTATGGATA
chr8	106763197	106763198	chr8:106763198:T:A	rs6991117	T	A	t	SOX2_HMG_3	15	1	-	4.064895909018425	5.299798345735147	AAACAATGTTAATGTAA
chr8	106903787	106903788	chr8:106903788:C:T	rs554547637	C	T	C	SOX2_HMG_3	35	0	+	0	0	.
chr8	107285813	107285814	chr8:107285814:C:T	rs572667654	C	T	C	SOX2_HMG_3	13	1	+	4.581012600335836	4.581012600335836	GTTCAATGTAATTCTTG
chr8	107353803	107353804	chr8:107353804:C:T	rs1283651	C	T	T	SOX2_HMG_3	29	0	-	0	0	.
chr8	107458157	107458158	chr8:107458158:A:G	rs73313679	A	G	A	SOX2_HMG_3	1	1	+	4.158523767873484	2.326876177794192	CATTAATTACAGTGATC
chr8	107766051	107766052	chr8:107766052:A:G	rs75904373	A	G	A	SOX2_HMG_3	5	1	+	4.021177074143366	-2.8875777051718545	AGTCTATGGTATTGTAC
chr8	107867976	107867977	chr8:107867977:A:G	rs937294	A	G	A	SOX2_HMG_3	20	0	-	0	0	.
chr8	107889447	107889448	chr8:107889448:T:G	rs6988397	T	G	G	SOX2_HMG_3	-7	0	+	0	0	.
chr8	108067152	108067153	chr8:108067153:A:C	rs7005475	A	C	C	SOX2_HMG_3	36	0	+	0	0	.
chr8	108081803	108081804	chr8:108081804:C:T	rs142665174	C	T	C	SOX2_HMG_3	31	0	+	0	0	.
chr8	108545666	108545667	chr8:108545667:C:T	rs148502575	C	T	C	SOX2_HMG_3	-20	0	-	0	0	.
chr8	108918366	108918367	chr8:108918367:T:C	rs56250608	T	C	T	SOX2_HMG_3	-10	0	+	0	0	.
chr8	108942645	108942646	chr8:108942646:C:T	rs116911578	C	T	C	SOX2_HMG_3	-14	0	+	0	0	.
chr8	109118798	109118799	chr8:109118799:G:T	rs75832829	G	T	G	SOX2_HMG_3	-13	0	-	0	0	.
chr8	109252033	109252034	chr8:109252034:T:G	chr8:109252034:T:G	T	G	T	SOX2_HMG_3	2	1	+	10.465965405105257	6.598350570427215	CCTCAATGGTATTGTTC
chr8	109292334	109292335	chr8:109292335:C:G	rs111598875	C	G	C	SOX2_HMG_3	-11	0	+	0	0	.
chr8	109448258	109448259	chr8:109448259:G:T	rs1673407	G	T	T	SOX2_HMG_3	16	1	+	5.4483990590103595	4.645328617234169	GGCCAATGATAGTGTGG
chr8	109631006	109631007	chr8:109631007:G:A	rs34147744	G	A	G	SOX2_HMG_3	13	1	+	4.083166536642119	-2.8255882426731014	GTTCAATTATGTTGAAT
chr8	109715521	109715522	chr8:109715522:C:A	rs3134344	C	A	A	SOX2_HMG_3	19	0	-	0	0	.
chr8	110959065	110959066	chr8:110959066:C:A	rs4637866	C	A	C	SOX2_HMG_3	16	1	+	6.879000612285694	8.605155490811967	AGGCAATTTCAGTGATC
chr8	111404476	111404477	chr8:111404477:G:C	rs548597174	G	C	G	SOX2_HMG_3	3	1	-	3.361680562952036	-3.547074216363184	AATCAATGTTATACAGG
chr8	111519161	111519162	chr8:111519162:T:C	rs12682170	T	C	T	SOX2_HMG_3	5	1	-	3.877280503723568	-3.0314742755916524	GATTCATGGTATTGAAG
chr8	111611619	111611620	chr8:111611620:G:C	rs35171173	G	C	G	SOX2_HMG_3	35	0	+	0	0	.
chr8	111765656	111765657	chr8:111765657:T:G	rs1904354	T	G	G	SOX2_HMG_3	27	0	+	0	0	.
chr8	112465256	112465257	chr8:112465257:C:T	rs61000735	C	T	C	SOX2_HMG_3	-5	0	+	0	0	.
chr8	112702995	112702996	chr8:112702996:A:C	rs4876290	A	C	C	SOX2_HMG_3	19	0	-	0	0	.
chr8	112888137	112888138	chr8:112888138:T:C	rs2125553	T	C	C	SOX2_HMG_3	8	1	+	5.59615037365217	4.724414021016306	AAACAATGTCCTTGAGG
chr8	113104440	113104441	chr8:113104441:T:A	rs1354445	T	A	A	SOX2_HMG_3	-8	0	-	0	0	.
chr8	113625600	113625601	chr8:113625601:T:G	rs10955669	T	G	t	SOX2_HMG_3	-14	0	-	0	0	.
chr8	113763815	113763816	chr8:113763816:G:C	rs6998978	G	C	G	SOX2_HMG_3	20	0	-	0	0	.
chr8	113944429	113944430	chr8:113944430:G:T	rs1418457523	G	T	G	SOX2_HMG_3	22	0	+	0	0	.
chr8	113966032	113966033	chr8:113966033:A:C	rs76262730	A	C	C	SOX2_HMG_3	-2	0	+	0	0	.
chr8	115218726	115218727	chr8:115218727:G:A	rs145251460	G	A	G	SOX2_HMG_3	35	0	-	0	0	.
chr8	115257411	115257412	chr8:115257412:T:A	rs60661746	T	A	T	SOX2_HMG_3	-5	0	-	0	0	.
chr8	115405965	115405966	chr8:115405966:G:A	rs231149	G	A	A	SOX2_HMG_3	33	0	-	0	0	.
chr8	116575086	116575087	chr8:116575087:G:A	rs147658139	G	A	G	SOX2_HMG_3	-6	0	+	0	0	.
chr8	116575093	116575094	chr8:116575094:A:T	rs2317380	A	T	A	SOX2_HMG_3	1	1	+	5.134099408267511	2.1280555557441954	TATCAACAGAAGTGATG
chr8	117707055	117707056	chr8:117707056:A:G	chr8:117707056:A:G	A	G	A	SOX2_HMG_3	35	0	-	0	0	.
chr8	117707101	117707102	chr8:117707102:A:G	rs734650	A	G	A	SOX2_HMG_3	-11	0	-	0	0	.
chr8	117864958	117864959	chr8:117864959:T:A	rs4129116	T	A	T	SOX2_HMG_3	33	0	-	0	0	.
chr8	117896047	117896048	chr8:117896048:A:T	rs142610507	A	T	A	SOX2_HMG_3	31	0	-	0	0	.
chr8	117921398	117921399	chr8:117921399:C:A	rs55712037	C	A	C	SOX2_HMG_3	-19	0	+	0	0	.
chr8	117957428	117957429	chr8:117957429:G:A	rs139559707	G	A	G	SOX2_HMG_3	24	0	+	0	0	.
chr8	117957435	117957436	chr8:117957436:C:T	chr8:117957436:C:T	C	T	C	SOX2_HMG_3	31	0	+	0	0	.
chr8	118009432	118009433	chr8:118009433:C:A	rs17453742	C	A	C	SOX2_HMG_3	-15	0	+	0	0	.
chr8	118009433	118009434	chr8:118009434:G:A	rs375146234	G	A	G	SOX2_HMG_3	-14	0	+	0	0	.
chr8	118517907	118517908	chr8:118517908:C:T	rs74499227	C	T	C	SOX2_HMG_3	-19	0	+	0	0	.
chr8	118521577	118521578	chr8:118521578:C:A	rs9297588	C	A	A	SOX2_HMG_3	30	0	+	0	0	.
chr8	119114254	119114255	chr8:119114255:T:G	rs16892081	T	G	T	SOX2_HMG_3	-9	0	+	0	0	.
chr8	119495789	119495790	chr8:119495790:T:A	rs6469828	T	A	T	SOX2_HMG_3	0	1	-	3.2703982676585555	2.608596666983862	AGTCAATGATTTTGGGG
chr8	119504648	119504649	chr8:119504649:A:C	rs10086941	A	C	C	SOX2_HMG_3	21	0	-	0	0	.
chr8	119604549	119604550	chr8:119604550:C:G	rs9297599	C	G	G	SOX2_HMG_3	-5	0	-	0	0	.
chr8	119908739	119908740	chr8:119908740:A:G	rs7017583	A	G	A	SOX2_HMG_3	6	1	+	3.5577332984141954	3.5577332984141954	AAACAAAGAAATTGAGG
chr8	120030817	120030818	chr8:120030818:C:G	rs12542032	C	G	C	SOX2_HMG_3	23	0	+	0	0	.
chr8	120041186	120041187	chr8:120041187:A:G	rs7829101	A	G	A	SOX2_HMG_3	8	1	+	3.255969280342354	4.105013227705983	CTTCCATGACAGTGAGA
chr8	120266710	120266711	chr8:120266711:A:G	rs16893791	A	G	A	SOX2_HMG_3	28	0	-	0	0	.
chr8	120344508	120344509	chr8:120344509:A:G	rs73706448	A	G	A	SOX2_HMG_3	35	0	-	0	0	.
chr8	120566850	120566851	chr8:120566851:A:G	rs7826902	A	G	G	SOX2_HMG_3	27	0	-	0	0	.
chr8	120580714	120580715	chr8:120580715:T:C	rs28415690	T	C	T	SOX2_HMG_3	17	0	-	0	0	.
chr8	120750702	120750703	chr8:120750703:T:C	rs11997006	T	C	C	SOX2_HMG_3	-13	0	-	0	0	.
chr8	120866450	120866451	chr8:120866451:C:T	rs6651222	C	T	T	SOX2_HMG_3	19	0	-	0	0	.
chr8	121017064	121017065	chr8:121017065:C:T	rs16894535	C	T	C	SOX2_HMG_3	-3	0	-	0	0	.
chr8	121017075	121017076	chr8:121017076:G:A	rs73333065	G	A	G	SOX2_HMG_3	-14	0	-	0	0	.
chr8	121059692	121059693	chr8:121059693:A:G	rs2117063	A	G	a	SOX2_HMG_3	28	0	-	0	0	.
chr8	121132755	121132756	chr8:121132756:C:T	rs1560771	C	T	T	SOX2_HMG_3	26	0	+	0	0	.
chr8	121348606	121348607	chr8:121348607:G:A	rs901563	G	A	A	SOX2_HMG_3	-16	0	-	0	0	.
chr8	121455364	121455365	chr8:121455365:G:A	rs10505402	G	A	A	SOX2_HMG_3	-6	0	-	0	0	.
chr8	121641677	121641678	chr8:121641678:C:A	rs3910552	C	A	C	SOX2_HMG_3	-6	0	-	0	0	.
chr8	121680339	121680340	chr8:121680340:G:A	rs10113295	G	A	A	SOX2_HMG_3	-3	0	-	0	0	.
chr8	121770719	121770720	chr8:121770720:A:G	rs17243536	A	G	A	SOX2_HMG_3	8	1	-	9.873676905977026	9.001940553341162	GTTCAATATCAGTGAAG
chr8	121811418	121811419	chr8:121811419:T:G	rs1371719	T	G	G	SOX2_HMG_3	30	0	-	0	0	.
chr8	121900742	121900743	chr8:121900743:C:T	rs7464955	C	T	C	SOX2_HMG_3	-19	0	+	0	0	.
chr8	122334806	122334807	chr8:122334807:G:C	rs34811381	G	C	G	SOX2_HMG_3	-16	0	+	0	0	.
chr8	122746700	122746701	chr8:122746701:C:T	rs6981534	C	T	T	SOX2_HMG_3	0	1	+	10.503282944429088	10.365953966380424	CATCAATGATATTGCTG
chr8	122852676	122852677	chr8:122852677:G:T	rs6982380	G	T	T	SOX2_HMG_3	29	0	+	0	0	.
chr8	122957782	122957783	chr8:122957783:T:C	rs56129936	T	C	T	SOX2_HMG_3	6	1	+	7.073830232574301	0.16507545325907957	GTTCCATGGTATTGAGA
chr8	123012771	123012772	chr8:123012772:T:C	rs578104600	T	C	T	SOX2_HMG_3	-13	0	+	0	0	.
chr8	123272131	123272132	chr8:123272132:T:C	rs7014857	T	C	T	SOX2_HMG_3	11	1	+	3.1121770978336705	-3.5805144003986764	AAACATTTCCATTGAAG
chr8	123438123	123438124	chr8:123438124:G:T	rs3765212	G	T	G	SOX2_HMG_3	27	0	-	0	0	.
chr8	123578267	123578268	chr8:123578268:T:C	rs72711207	T	C	T	SOX2_HMG_3	30	0	-	0	0	.
chr8	123595469	123595470	chr8:123595470:A:G	rs28445658	A	G	A	SOX2_HMG_3	-20	0	+	0	0	.
chr8	123777176	123777177	chr8:123777177:G:A	rs7012004	G	A	G	SOX2_HMG_3	7	1	+	4.110154145280712	1.3813670247193774	AATCATTGTTATTGGCT
chr8	124153581	124153582	chr8:124153582:G:A	rs757357438	G	A	g	SOX2_HMG_3	-17	0	+	0	0	.
chr8	124375336	124375337	chr8:124375337:G:C	rs4128778	G	C	C	SOX2_HMG_3	9	1	-	1.6547552868896476	-3.9779249502734046	CAGCCATGTCAGTGAGC
chr8	124562130	124562131	chr8:124562131:G:A	rs72714718	G	A	G	SOX2_HMG_3	-3	0	-	0	0	.
chr8	124669607	124669608	chr8:124669608:T:C	rs7016031	T	C	C	SOX2_HMG_3	-2	0	+	0	0	.
chr8	124690168	124690169	chr8:124690169:G:A	rs372232387	G	A	G	SOX2_HMG_3	33	0	-	0	0	.
chr8	124690180	124690181	chr8:124690181:G:C	rs183570785	G	C	g	SOX2_HMG_3	21	0	-	0	0	.
chr8	124717961	124717962	chr8:124717962:G:A	rs4870920	G	A	G	SOX2_HMG_3	34	0	-	0	0	.
chr8	124896371	124896372	chr8:124896372:C:T	rs6470322	C	T	C	SOX2_HMG_3	20	0	+	0	0	.
chr8	124896372	124896373	chr8:124896373:T:C	rs11783773	T	C	T	SOX2_HMG_3	21	0	+	0	0	.
chr8	125156721	125156722	chr8:125156722:C:A	rs74493457	C	A	C	SOX2_HMG_3	23	0	+	0	0	.
chr8	125255387	125255388	chr8:125255388:T:G	rs7008482	T	G	G	SOX2_HMG_3	18	0	+	0	0	.
chr8	125294674	125294675	chr8:125294675:G:A	rs10101690	G	A	A	SOX2_HMG_3	0	1	+	4.442980726367907	4.222386447282613	GATGAATGTCATTTATG
chr8	125358636	125358637	chr8:125358637:T:G	rs6651237	T	G	T	SOX2_HMG_3	-16	0	-	0	0	.
chr8	125484532	125484533	chr8:125484533:C:T	rs16900644	C	T	C	SOX2_HMG_3	7	1	-	2.450358596206994	-0.2784285243543406	AGTCAACGTAAGTGTGG
chr8	125517163	125517164	chr8:125517164:G:C	rs4352874	G	C	C	SOX2_HMG_3	21	0	-	0	0	.
chr8	125517170	125517171	chr8:125517171:T:C	rs4347008	T	C	C	SOX2_HMG_3	14	1	-	7.121855549169422	2.9399779318683024	GATCAATGCCAGTCAGA
chr8	125546957	125546958	chr8:125546958:T:G	rs6988015	T	G	G	SOX2_HMG_3	-4	0	+	0	0	.
chr8	125546983	125546984	chr8:125546984:G:A	rs188678347	G	A	G	SOX2_HMG_3	22	0	+	0	0	.
chr8	125636239	125636240	chr8:125636240:A:G	rs60074719	A	G	G	SOX2_HMG_3	27	0	-	0	0	.
chr8	125676794	125676795	chr8:125676795:T:C	rs11997786	T	C	T	SOX2_HMG_3	21	0	+	0	0	.
chr8	126596322	126596323	chr8:126596323:G:A	rs7000438	G	A	G	SOX2_HMG_3	-4	0	+	0	0	.
chr8	126898760	126898761	chr8:126898761:G:A	rs11775030	G	A	G	SOX2_HMG_3	-5	0	+	0	0	.
chr8	127253847	127253848	chr8:127253848:C:T	rs954559696	C	T	C	SOX2_HMG_3	20	0	+	0	0	.
chr8	127401732	127401733	chr8:127401733:T:C	rs7008058	T	C	C	SOX2_HMG_3	33	0	-	0	0	.
chr8	127490337	127490338	chr8:127490338:C:T	rs7820229	C	T	T	SOX2_HMG_3	29	0	+	0	0	.
chr8	127552805	127552806	chr8:127552806:T:C	rs888486899	T	C	T	SOX2_HMG_3	14	1	-	5.559513938875808	1.3776363215746892	CTTCAATTTTATTTATT
chr8	127564089	127564090	chr8:127564090:G:C	rs10956374	G	C	G	SOX2_HMG_3	29	0	+	0	0	.
chr8	127591194	127591195	chr8:127591195:C:T	rs4552863	C	T	C	SOX2_HMG_3	0	1	+	7.095770960298104	6.95844198224944	CATCAATAGTACTGAGG
chr8	127679182	127679183	chr8:127679183:A:G	rs12548317	A	G	A	SOX2_HMG_3	-2	0	-	0	0	.
chr8	127918902	127918903	chr8:127918903:C:T	rs116650414	C	T	c	SOX2_HMG_3	22	0	-	0	0	.
chr8	127949500	127949501	chr8:127949501:C:T	rs13250390	C	T	C	SOX2_HMG_3	20	0	-	0	0	.
chr8	127967913	127967914	chr8:127967914:G:A	rs536889170	G	A	G	SOX2_HMG_3	-5	0	-	0	0	.
chr8	127981474	127981475	chr8:127981475:C:T	rs115311148	C	T	C	SOX2_HMG_3	-10	0	+	0	0	.
chr8	128007285	128007286	chr8:128007286:C:A	rs73355697	C	A	C	SOX2_HMG_3	16	1	+	4.554124177304504	6.280279055830777	GGGCAATAGTATTGTAC
chr8	128033719	128033720	chr8:128033720:A:T	rs182212638	A	T	A	SOX2_HMG_3	1	1	+	5.229354434663714	2.2233105821403987	TAACAATGGCCTTGAAG
chr8	128184799	128184800	chr8:128184800:G:T	rs80272901	G	T	G	SOX2_HMG_3	26	0	-	0	0	.
chr8	128376640	128376641	chr8:128376641:A:T	rs112287406	A	T	A	SOX2_HMG_3	-12	0	-	0	0	.
chr8	128390780	128390781	chr8:128390781:G:A	rs1516959	G	A	G	SOX2_HMG_3	-20	0	+	0	0	.
chr8	128557124	128557125	chr8:128557125:G:A	rs1561924	G	A	A	SOX2_HMG_3	9	1	-	15.902871954137545	16.709542088074592	GATCAATGGCAGTGATT
chr8	128754564	128754565	chr8:128754565:A:G	rs6470656	A	G	G	SOX2_HMG_3	34	0	+	0	0	.
chr8	128939522	128939523	chr8:128939523:C:T	rs7815993	C	T	C	SOX2_HMG_3	-18	0	+	0	0	.
chr8	129001724	129001725	chr8:129001725:C:T	rs7836274	C	T	T	SOX2_HMG_3	-14	0	+	0	0	.
chr8	129241196	129241197	chr8:129241197:G:C	rs7817451	G	C	C	SOX2_HMG_3	-14	0	-	0	0	.
chr8	129370992	129370993	chr8:129370993:C:T	rs6470727	C	T	T	SOX2_HMG_3	22	0	+	0	0	.
chr8	129707874	129707875	chr8:129707875:T:C	rs10110842	T	C	T	SOX2_HMG_3	26	0	-	0	0	.
chr8	129882546	129882547	chr8:129882547:A:G	rs76857096	A	G	A	SOX2_HMG_3	19	0	-	0	0	.
chr8	129998558	129998559	chr8:129998559:C:T	rs112271978	C	T	C	SOX2_HMG_3	-13	0	-	0	0	.
chr8	130207738	130207739	chr8:130207739:A:C	rs570487126	A	C	A	SOX2_HMG_3	-9	0	-	0	0	.
chr8	130220315	130220316	chr8:130220316:G:T	rs77773581	G	T	G	SOX2_HMG_3	-8	0	+	0	0	.
chr8	130247917	130247918	chr8:130247918:T:C	rs2670888	T	C	T	SOX2_HMG_3	-20	0	-	0	0	.
chr8	130350994	130350995	chr8:130350995:G:A	rs2791354	G	A	G	SOX2_HMG_3	28	0	-	0	0	.
chr8	130549869	130549870	chr8:130549870:A:T	rs4276705	A	T	T	SOX2_HMG_3	-20	0	-	0	0	.
chr8	131446022	131446023	chr8:131446023:A:G	rs1430314	A	G	A	SOX2_HMG_3	1	1	+	4.804016672654915	2.9723690825756237	CATCAACGTAATTGTAT
chr8	131588424	131588425	chr8:131588425:G:A	rs277013	G	A	A	SOX2_HMG_3	-1	0	-	0	0	.
chr8	132675779	132675780	chr8:132675780:T:A	rs150988247	T	A	t	SOX2_HMG_3	-2	0	+	0	0	.
chr8	133203267	133203268	chr8:133203268:C:T	rs145447010	C	T	C	SOX2_HMG_3	21	0	-	0	0	.
chr8	133274157	133274158	chr8:133274158:G:A	rs2929996	G	A	A	SOX2_HMG_3	-6	0	+	0	0	.
chr8	133579537	133579538	chr8:133579538:T:C	rs73363005	T	C	T	SOX2_HMG_3	8	1	-	5.252037068549257	6.101081015912886	AGACAGTGATATTGATG
chr8	133655419	133655420	chr8:133655420:G:C	rs10097033	G	C	G	SOX2_HMG_3	19	0	-	0	0	.
chr8	133674830	133674831	chr8:133674831:G:T	rs79850773	G	T	G	SOX2_HMG_3	-9	0	+	0	0	.
chr8	133674860	133674861	chr8:133674861:G:A	rs115000355	G	A	g	SOX2_HMG_3	21	0	+	0	0	.
chr8	133845788	133845789	chr8:133845789:G:A	rs7832591	G	A	G	SOX2_HMG_3	-15	0	+	0	0	.
chr8	134078096	134078097	chr8:134078097:T:C	rs7842219	T	C	T	SOX2_HMG_3	11	1	+	3.688760236362484	-3.003931261869863	GATCAAGAACATTGTAG
chr8	134228551	134228552	chr8:134228552:C:A	rs57909274	C	A	A	SOX2_HMG_3	-5	0	+	0	0	.
chr8	134256935	134256936	chr8:134256936:T:C	rs1867947	T	C	T	SOX2_HMG_3	30	0	-	0	0	.
chr8	134256954	134256955	chr8:134256955:C:T	rs1867948	C	T	T	SOX2_HMG_3	11	1	-	3.372451513419203	-1.9031600155931947	GATCAATGCCTGTGGAA
chr8	134446064	134446065	chr8:134446065:T:C	rs13281592	T	C	t	SOX2_HMG_3	5	1	-	1.9669439472606376	-4.94181083205458	TGCCAATGTCTTTGAGG
chr8	134522462	134522463	chr8:134522463:C:T	rs10283274	C	T	C	SOX2_HMG_3	21	0	-	0	0	.
chr8	134546057	134546058	chr8:134546058:T:C	rs1530318	T	C	T	SOX2_HMG_3	13	1	-	2.6729363685143386	9.58169114782956	CGTCAGTGTTATTAATG
chr8	134552542	134552543	chr8:134552543:G:T	rs4909482	G	T	G	SOX2_HMG_3	-1	0	+	0	0	.
chr8	134746974	134746975	chr8:134746975:G:C	rs56412463	G	C	g	SOX2_HMG_3	23	0	-	0	0	.
chr8	134746992	134746993	chr8:134746993:C:A	rs6577775	C	A	a	SOX2_HMG_3	5	1	-	4.008696752935885	4.008696752935885	AATCAGTAGTAGTGACT
chr8	134757645	134757646	chr8:134757646:A:G	rs67047054	A	G	a	SOX2_HMG_3	2	1	+	9.483884435013755	9.483884435013755	AGACAATGGAATTGAGG
chr8	134757669	134757670	chr8:134757670:G:A	rs111593990	G	A	g	SOX2_HMG_3	26	0	+	0	0	.
chr8	134777779	134777780	chr8:134777780:G:A	rs77039133	G	A	g	SOX2_HMG_3	3	1	-	4.1969763651237795	-2.7117784141914396	AGACAATGTCATAGAAG
chr8	135418090	135418091	chr8:135418091:C:A	rs716035	C	A	A	SOX2_HMG_3	-6	0	+	0	0	.
chr8	135418103	135418104	chr8:135418104:G:A	rs117970095	G	A	G	SOX2_HMG_3	7	1	+	4.374803855571265	1.6460167350099295	TGCCAATGAAAGTGTTG
chr8	135516340	135516341	chr8:135516341:C:G	rs6992764	C	G	C	SOX2_HMG_3	33	0	-	0	0	.
chr8	135605776	135605777	chr8:135605777:A:G	rs58969006	A	G	A	SOX2_HMG_3	5	1	+	5.753593692075703	-1.1551610872395184	TGTCAACTGTATTGAAA
chr8	135610910	135610911	chr8:135610911:T:C	rs34951743	T	C	T	SOX2_HMG_3	11	1	+	3.325240012487916	-3.36745148574443	AGACAGTGCCATTGAAG
chr8	135681570	135681571	chr8:135681571:C:T	rs55769860	C	T	G	SOX2_HMG_3	-9	0	+	0	0	.
chr8	135714506	135714507	chr8:135714507:C:T	rs7814248	C	T	C	SOX2_HMG_3	31	0	-	0	0	.
chr8	135731300	135731301	chr8:135731301:G:A	rs7832101	G	A	A	SOX2_HMG_3	-6	0	+	0	0	.
chr8	136026717	136026718	chr8:136026718:T:C	chr8:136026718:T:C	T	C	T	SOX2_HMG_3	8	1	-	8.974552998134017	9.823596945497645	TGTCAATGAAAGTGACA
chr8	136040980	136040981	chr8:136040981:G:A	rs2317349	G	A	G	SOX2_HMG_3	-2	0	-	0	0	.
chr8	136059370	136059371	chr8:136059371:C:T	rs13274132	C	T	C	SOX2_HMG_3	-7	0	-	0	0	.
chr8	136143332	136143333	chr8:136143333:G:A	rs4909572	G	A	G	SOX2_HMG_3	-5	0	+	0	0	.
chr8	136714233	136714234	chr8:136714234:C:T	rs146191973	C	T	C	SOX2_HMG_3	-5	0	+	0	0	.
chr8	137150967	137150968	chr8:137150968:A:G	rs7009688	A	G	G	SOX2_HMG_3	-11	0	+	0	0	.
chr8	137303845	137303846	chr8:137303846:A:G	rs10105942	A	G	A	SOX2_HMG_3	27	0	-	0	0	.
chr8	137603388	137603389	chr8:137603389:A:G	rs4489355	A	G	G	SOX2_HMG_3	10	1	+	4.987493353206483	-1.9212614261087384	TATCAATGCTATAGGAG
chr8	138171608	138171609	chr8:138171609:A:T	rs10103726	A	T	A	SOX2_HMG_3	-4	0	-	0	0	.
chr8	138176554	138176555	chr8:138176555:G:A	rs4430137	G	A	G	SOX2_HMG_3	1	1	+	2.8275022374449525	4.659149827524245	CGTGAATGTCATTGTAC
chr8	138177258	138177259	chr8:138177259:T:A	rs6985633	T	A	A	SOX2_HMG_3	10	1	-	3.6219402395888083	-3.286814539726412	TCTCACTGGAAGTGAAG
chr8	138196569	138196570	chr8:138196570:T:C	rs4909749	T	C	C	SOX2_HMG_3	24	0	-	0	0	.
chr8	138390834	138390835	chr8:138390835:A:T	rs883972	A	T	T	SOX2_HMG_3	16	1	+	3.584088023785341	3.054705198399423	ACTCTATGGCAGTGTTA
chr8	138415790	138415791	chr8:138415791:G:T	rs35925122	G	T	G	SOX2_HMG_3	13	1	+	5.611152617582464	-1.2976021617327564	AATGAATGACAGTGACA
chr8	139096465	139096466	chr8:139096466:A:G	rs78193702	A	G	A	SOX2_HMG_3	11	1	-	3.4428152634353886	-3.2498762347969583	CAACAAGGATATTGACA
chr8	139096478	139096479	chr8:139096479:T:C	rs79705081	T	C	c	SOX2_HMG_3	-2	0	-	0	0	.
chr8	139097280	139097281	chr8:139097281:C:T	rs2202559	C	T	T	SOX2_HMG_3	-9	0	+	0	0	.
chr8	139197499	139197500	chr8:139197500:T:C	rs148539313	T	C	T	SOX2_HMG_3	10	1	-	3.4115035044005046	-3.4972512749147158	GCTCAATGACATTTTAG
chr8	139197504	139197505	chr8:139197505:T:C	rs12544421	T	C	T	SOX2_HMG_3	5	1	-	3.4115035044005046	-3.4972512749147167	GCTCAATGACATTTTAG
chr8	139533286	139533287	chr8:139533287:A:T	rs4644220	A	T	A	SOX2_HMG_3	34	0	-	0	0	.
chr8	139592031	139592032	chr8:139592032:C:A	rs10110109	C	A	A	SOX2_HMG_3	30	0	+	0	0	.
chr8	139798510	139798511	chr8:139798511:C:T	rs72683235	C	T	T	SOX2_HMG_3	15	1	+	2.283793183967427	5.126502340144285	GAGCAATGGCTGTGACT
chr8	140051699	140051700	chr8:140051700:A:G	rs4374967	A	G	A	SOX2_HMG_3	6	1	-	3.286897230217649	-3.621857549097572	TATCAATGTCCTTTATA
chr8	140060393	140060394	chr8:140060394:T:A	rs146889587	T	A	T	SOX2_HMG_3	14	1	+	2.2214359863471835	4.934209831161478	CAGCAATGGCCTTGTGG
chr8	140209111	140209112	chr8:140209112:C:T	rs12717828	C	T	C	SOX2_HMG_3	-13	0	-	0	0	.
chr8	140327859	140327860	chr8:140327860:T:C	rs372133407	T	C	T	SOX2_HMG_3	23	0	-	0	0	.
chr8	140327871	140327872	chr8:140327872:A:C	rs375160681	A	C	A	SOX2_HMG_3	11	1	-	6.323853128103089	4.90677315888314	ATTCAGTGGTATTGAGT
chr8	140507167	140507168	chr8:140507168:G:C	rs145498786	G	C	C	SOX2_HMG_3	36	0	-	0	0	.
chr8	140549434	140549435	chr8:140549435:C:T	rs55814669	C	T	C	SOX2_HMG_3	36	0	+	0	0	.
chr8	140587898	140587899	chr8:140587899:G:A	rs117060410	G	A	G	SOX2_HMG_3	0	1	-	2.106054828954784	1.9687258509061203	CGTGAATGCCAGTGTGG
chr8	140629528	140629529	chr8:140629529:G:A	rs7004365	G	A	G	SOX2_HMG_3	4	1	+	3.1186403022936897	10.027395081608912	TCTCGATGACAGTGAGA
chr8	140882790	140882791	chr8:140882791:C:G	rs150407606	C	G	C	SOX2_HMG_3	18	0	+	0	0	.
chr8	140926239	140926240	chr8:140926240:T:C	rs148743935	T	C	T	SOX2_HMG_3	-18	0	-	0	0	.
chr8	141030309	141030310	chr8:141030310:A:T	rs35807050	A	T	T	SOX2_HMG_3	28	0	-	0	0	.
chr8	141035964	141035965	chr8:141035965:C:G	rs567237543	C	G	C	SOX2_HMG_3	8	1	-	2.9206132755418017	2.186344842770602	AGCCAATTGTGTTGATG
chr8	141035965	141035966	chr8:141035966:A:G	rs306983	A	G	G	SOX2_HMG_3	7	1	-	2.9206132755418017	-1.7675184311606347	AGCCAATTGTGTTGATG
chr8	141035980	141035981	chr8:141035981:C:T	rs66991463	C	T	C	SOX2_HMG_3	-8	0	-	0	0	.
chr8	141199443	141199444	chr8:141199444:C:T	rs6578153	C	T	C	SOX2_HMG_3	29	0	+	0	0	.
chr8	141341228	141341229	chr8:141341229:G:A	rs4961363	G	A	G	SOX2_HMG_3	-5	0	+	0	0	.
chr8	141465043	141465044	chr8:141465044:C:A	rs7846272	C	A	A	SOX2_HMG_3	22	0	+	0	0	.
chr8	141554863	141554864	chr8:141554864:A:G	rs4907402	A	G	-	SOX2_HMG_3	19	0	+	0	0	.
chr8	141757667	141757668	chr8:141757668:A:G	rs58058193	A	G	A	SOX2_HMG_3	15	1	-	3.0674153514834908	0.2247061953066325	GACCAATAGGAGTGATA
chr8	141930693	141930694	chr8:141930694:G:A	rs114903020	G	A	G	SOX2_HMG_3	8	1	-	11.1905875614491	12.062323914084963	TCTCAATGCTATTGACA
chr8	142143260	142143261	chr8:142143261:G:A	rs75785598	G	A	G	SOX2_HMG_3	-13	0	+	0	0	.
chr8	142143282	142143283	chr8:142143283:G:C	rs11997501	G	C	C	SOX2_HMG_3	9	1	+	2.768827318820833	8.401507555983885	CAGCAATGAGAGTGACG
chr8	142231142	142231143	chr8:142231143:C:T	rs56031226	C	T	C	SOX2_HMG_3	24	0	-	0	0	.
chr8	142239355	142239356	chr8:142239356:T:C	rs7465677	T	C	C	SOX2_HMG_3	36	0	-	0	0	.
chr8	142243105	142243106	chr8:142243106:G:A	rs6583608	G	A	G	SOX2_HMG_3	7	1	+	9.073949652132601	6.345162531571267	GATCAATGTTGGTGAGG
chr8	142394752	142394753	chr8:142394753:A:G	rs28433910	A	G	G	SOX2_HMG_3	-4	0	-	0	0	.
chr8	142675618	142675619	chr8:142675619:T:C	rs2920283	T	C	C	SOX2_HMG_3	-14	0	-	0	0	.
chr8	142905774	142905775	chr8:142905775:G:A	rs6987382	G	A	G	SOX2_HMG_3	16	1	-	7.389589107447113	8.586361160587467	GGCCAATGTTATTGACC
chr8	142905801	142905802	chr8:142905802:T:A	rs4736357	T	A	A	SOX2_HMG_3	-11	0	-	0	0	.
chr8	143059195	143059196	chr8:143059196:A:G	rs6991866	A	G	G	SOX2_HMG_3	-20	0	+	0	0	.
chr8	143059200	143059201	chr8:143059201:G:C	rs7005116	G	C	C	SOX2_HMG_3	-15	0	+	0	0	.
chr8	143126498	143126499	chr8:143126499:G:A	rs55918250	G	A	G	SOX2_HMG_3	36	0	-	0	0	.
chr8	143201129	143201130	chr8:143201130:A:G	rs12548918	A	G	A	SOX2_HMG_3	-2	0	-	0	0	.
chr8	143467325	143467326	chr8:143467326:A:G	rs188342475	A	G	A	SOX2_HMG_3	17	0	-	0	0	.
chr8	143467353	143467354	chr8:143467354:G:A	rs141299726	G	A	G	SOX2_HMG_3	-11	0	-	0	0	.
chr8	143967774	143967775	chr8:143967775:T:C	rs112641794	T	C	T	SOX2_HMG_3	23	0	+	0	0	.
chr8	144575043	144575044	chr8:144575044:C:T	rs113859476	C	T	C	SOX2_HMG_3	8	1	+	3.252591402602661	4.124327755238525	GCTAAATGCCATTGTAA
chr8	144575048	144575049	chr8:144575049:G:A	rs112331774	G	A	G	SOX2_HMG_3	13	1	+	3.252591402602661	-3.656163376712559	GCTAAATGCCATTGTAA
chr8	144618072	144618073	chr8:144618073:C:T	rs139184188	C	T	C	SOX2_HMG_3	-20	0	+	0	0	.
chr9	326766	326767	chr9:326767:C:T	rs1556022	C	T	C	SOX2_HMG_3	-4	0	-	0	0	.
chr9	344689	344690	chr9:344690:T:C	rs7873573	T	C	T	SOX2_HMG_3	-13	0	+	0	0	.
chr9	474204	474205	chr9:474205:A:G	rs7867795	A	G	A	SOX2_HMG_3	-4	0	+	0	0	.
chr9	474238	474239	chr9:474239:G:A	rs7850568	G	A	G	SOX2_HMG_3	30	0	+	0	0	.
chr9	479586	479587	chr9:479587:G:C	rs10815059	G	C	G	SOX2_HMG_3	33	0	+	0	0	.
chr9	505848	505849	chr9:505849:T:A	rs148695305	T	A	T	SOX2_HMG_3	-7	0	-	0	0	.
chr9	534257	534258	chr9:534258:G:C	rs7031554	G	C	C	SOX2_HMG_3	-3	0	+	0	0	.
chr9	739735	739736	chr9:739736:T:C	rs7869472	T	C	T	SOX2_HMG_3	5	1	-	4.041090588312423	-2.8676641910027953	CAGCAATGGAATTAAAA
chr9	887018	887019	chr9:887019:A:G	rs10815945	A	G	A	SOX2_HMG_3	24	0	-	0	0	.
chr9	911222	911223	chr9:911223:A:C	rs115247949	A	C	A	SOX2_HMG_3	-18	0	-	0	0	.
chr9	978107	978108	chr9:978108:T:C	rs279890	T	C	C	SOX2_HMG_3	32	0	+	0	0	.
chr9	1216634	1216635	chr9:1216635:C:T	rs3920797	C	T	T	SOX2_HMG_3	29	0	+	0	0	.
chr9	1222607	1222608	chr9:1222608:C:G	rs10960495	C	G	C	SOX2_HMG_3	-2	0	+	0	0	.
chr9	1222644	1222645	chr9:1222645:G:C	rs9298671	G	C	C	SOX2_HMG_3	35	0	+	0	0	.
chr9	1415078	1415079	chr9:1415079:A:C	rs148179666	A	C	A	SOX2_HMG_3	2	1	-	2.7933852461931323	-1.0742295884849078	GATCATTGTGAGTGAAA
chr9	1459662	1459663	chr9:1459663:T:C	rs10114417	T	C	T	SOX2_HMG_3	5	1	-	8.717220092010532	1.8084653126953119	CAACAATGATATTGTAT
chr9	1841393	1841394	chr9:1841394:T:A	rs10756957	T	A	t	SOX2_HMG_3	-5	0	-	0	0	.
chr9	1940291	1940292	chr9:1940292:G:C	rs779722467	G	C	g	SOX2_HMG_3	34	0	-	0	0	.
chr9	1940320	1940321	chr9:1940321:T:C	rs139438220	T	C	t	SOX2_HMG_3	5	1	-	12.24336687218623	5.33461209287101	CATCAATTGAATTGAAT
chr9	1995748	1995749	chr9:1995749:C:G	rs10811256	C	G	C	SOX2_HMG_3	-6	0	-	0	0	.
chr9	2228076	2228077	chr9:2228077:A:G	rs7350291	A	G	A	SOX2_HMG_3	10	1	+	2.834451813225061	-4.07430296609016	GTCCAATGTCATTGGAC
chr9	2228088	2228089	chr9:2228089:C:T	rs62528850	C	T	C	SOX2_HMG_3	22	0	+	0	0	.
chr9	2228404	2228405	chr9:2228405:G:C	rs10965286	G	C	G	SOX2_HMG_3	19	0	+	0	0	.
chr9	2234211	2234212	chr9:2234212:A:C	rs189533736	A	C	A	SOX2_HMG_3	8	1	+	5.539423593519331	5.654199108111758	AATCAATTAAATTAAAA
chr9	2271168	2271169	chr9:2271169:A:G	rs12342290	A	G	A	SOX2_HMG_3	-8	0	-	0	0	.
chr9	2287690	2287691	chr9:2287691:C:T	rs12380302	C	T	C	SOX2_HMG_3	2	1	-	2.5901065211288534	2.5901065211288534	ATGCAAAGTCATTGAGG
chr9	2355671	2355672	chr9:2355672:G:A	rs10811929	G	A	A	SOX2_HMG_3	7	1	+	5.192782028276261	2.463994907714926	AAGCAATGTAAATGAAG
chr9	2419537	2419538	chr9:2419538:G:A	rs872039	G	A	A	SOX2_HMG_3	-3	0	+	0	0	.
chr9	2526148	2526149	chr9:2526149:G:C	rs2183736	G	C	C	SOX2_HMG_3	19	0	-	0	0	.
chr9	2640804	2640805	chr9:2640805:G:A	rs10967306	G	A	G	SOX2_HMG_3	13	1	+	3.708919925694529	-3.199834853620691	GGTCAAGGCAAGTGAGT
chr9	3733598	3733599	chr9:3733599:G:C	rs4741848	G	C	C	SOX2_HMG_3	-20	0	+	0	0	.
chr9	3733603	3733604	chr9:3733604:T:C	rs10973264	T	C	T	SOX2_HMG_3	-15	0	+	0	0	.
chr9	3739357	3739358	chr9:3739358:T:C	rs12379911	T	C	T	SOX2_HMG_3	5	1	-	3.5949635438668484	-3.313791235448373	AGTCAATTGAGTTGAGT
chr9	3827560	3827561	chr9:3827561:G:C	rs4997836	G	C	G	SOX2_HMG_3	21	0	-	0	0	.
chr9	3830453	3830454	chr9:3830454:G:A	rs186684793	G	A	G	SOX2_HMG_3	-18	0	+	0	0	.
chr9	3859603	3859604	chr9:3859604:C:T	rs16919799	C	T	T	SOX2_HMG_3	8	1	-	4.164507379435463	3.315463432071835	GATGAATGGGAGTGATG
chr9	3917216	3917217	chr9:3917217:T:G	rs148803132	T	G	T	SOX2_HMG_3	4	1	-	3.9672878860614187	-2.9414668932538017	AAGCAATGATATTTACA
chr9	3980481	3980482	chr9:3980482:T:G	chr9:3980482:T:G	T	G	T	SOX2_HMG_3	27	0	-	0	0	.
chr9	4029655	4029656	chr9:4029656:G:A	rs35980996	G	A	G	SOX2_HMG_3	0	1	+	13.07586770003769	12.855273420952397	GCTCAATTGTATTGATT
chr9	4096379	4096380	chr9:4096380:T:C	rs1770393	T	C	T	SOX2_HMG_3	12	1	+	5.158118163738118	-1.750636615577102	GGTCATTTGTATTGTTA
chr9	4096384	4096385	chr9:4096385:A:T	rs1742805	A	T	A	SOX2_HMG_3	17	0	+	0	0	.
chr9	4225720	4225721	chr9:4225721:T:C	rs16920940	T	C	T	SOX2_HMG_3	11	1	-	3.1720084743749246	8.447620003387321	TAGCAATGTCAATGACT
chr9	4226629	4226630	chr9:4226630:C:T	rs10814891	C	T	C	SOX2_HMG_3	-1	0	-	0	0	.
chr9	4226642	4226643	chr9:4226643:T:C	rs10814892	T	C	T	SOX2_HMG_3	-14	0	-	0	0	.
chr9	4788009	4788010	chr9:4788010:C:G	rs34561525	C	G	G	SOX2_HMG_3	24	0	-	0	0	.
chr9	4788042	4788043	chr9:4788043:A:T	rs34133396	A	T	A	SOX2_HMG_3	-9	0	-	0	0	.
chr9	4932652	4932653	chr9:4932653:T:G	rs7034721	T	G	G	SOX2_HMG_3	14	1	-	2.9500360695090193	-3.8822626360576735	CATGGATGGTAGTGATG
chr9	5389418	5389419	chr9:5389419:G:A	rs111832850	G	A	G	SOX2_HMG_3	30	0	+	0	0	.
chr9	5742084	5742085	chr9:5742085:C:T	rs4742120	C	T	C	SOX2_HMG_3	11	1	-	5.9622426283845975	0.6866310993721993	CATCAGTGGAAGTGAAT
chr9	6230669	6230670	chr9:6230670:C:G	rs10815383	C	G	C	SOX2_HMG_3	33	0	-	0	0	.
chr9	6230682	6230683	chr9:6230683:C:A	rs892720677	C	A	C	SOX2_HMG_3	20	0	-	0	0	.
chr9	6682703	6682704	chr9:6682704:C:A	rs28405929	C	A	C	SOX2_HMG_3	18	0	+	0	0	.
chr9	6835418	6835419	chr9:6835419:C:T	rs7030531	C	T	C	SOX2_HMG_3	25	0	-	0	0	.
chr9	6869286	6869287	chr9:6869287:C:G	rs371086531	C	G	C	SOX2_HMG_3	30	0	+	0	0	.
chr9	6988418	6988419	chr9:6988419:T:C	rs2760648	T	C	C	SOX2_HMG_3	-9	0	+	0	0	.
chr9	6988438	6988439	chr9:6988439:T:C	rs2760649	T	C	T	SOX2_HMG_3	11	1	+	5.439085113878225	-1.253606384354123	CAACATTGCTATTGAAG
chr9	7022909	7022910	chr9:7022910:G:A	rs10975984	G	A	G	SOX2_HMG_3	21	0	+	0	0	.
chr9	7072097	7072098	chr9:7072098:A:G	rs4740870	A	G	A	SOX2_HMG_3	-16	0	+	0	0	.
chr9	7076462	7076463	chr9:7076463:G:A	rs1570512	G	A	A	SOX2_HMG_3	26	0	-	0	0	.
chr9	7121028	7121029	chr9:7121029:C:G	rs10976048	C	G	C	SOX2_HMG_3	34	0	-	0	0	.
chr9	7153706	7153707	chr9:7153707:C:A	rs73398971	C	A	C	SOX2_HMG_3	21	0	-	0	0	.
chr9	7283983	7283984	chr9:7283984:A:G	rs2820935	A	G	A	SOX2_HMG_3	0	1	-	3.470108545750269	3.6074375237989327	TGACAATGCTATTCAAG
chr9	7358782	7358783	chr9:7358783:C:G	rs4742335	C	G	C	SOX2_HMG_3	-2	0	-	0	0	.
chr9	7374783	7374784	chr9:7374784:C:G	rs116828856	C	G	C	SOX2_HMG_3	36	0	+	0	0	.
chr9	7461870	7461871	chr9:7461871:T:C	rs2997572	T	C	C	SOX2_HMG_3	-13	0	+	0	0	.
chr9	7570332	7570333	chr9:7570333:G:A	rs78421155	G	A	A	SOX2_HMG_3	22	0	-	0	0	.
chr9	7570348	7570349	chr9:7570349:A:G	rs75229316	A	G	A	SOX2_HMG_3	6	1	-	4.36656938070811	-2.5421853986071103	AGTCAATGTCAGTATTT
chr9	7578593	7578594	chr9:7578594:C:T	rs13290529	C	T	C	SOX2_HMG_3	-16	0	-	0	0	.
chr9	7711048	7711049	chr9:7711049:G:C	rs328865	G	C	C	SOX2_HMG_3	3	1	-	3.9863341326560513	-2.922420646659169	CATCAGTTCAAGTGAAG
chr9	7784511	7784512	chr9:7784512:T:C	rs3904482	T	C	T	SOX2_HMG_3	-17	0	+	0	0	.
chr9	7963226	7963227	chr9:7963227:A:G	rs34119686	A	G	A	SOX2_HMG_3	-2	0	+	0	0	.
chr9	7979831	7979832	chr9:7979832:T:C	rs1322473	T	C	C	SOX2_HMG_3	-3	0	+	0	0	.
chr9	7979865	7979866	chr9:7979866:A:G	rs7864843	A	G	G	SOX2_HMG_3	31	0	+	0	0	.
chr9	8053132	8053133	chr9:8053133:T:C	rs150156175	T	C	T	SOX2_HMG_3	-4	0	+	0	0	.
chr9	8115875	8115876	chr9:8115876:G:A	rs10815762	G	A	G	SOX2_HMG_3	-2	0	+	0	0	.
chr9	8232697	8232698	chr9:8232698:T:G	rs10815797	T	G	T	SOX2_HMG_3	27	0	+	0	0	.
chr9	8264660	8264661	chr9:8264661:C:T	rs10976895	C	T	C	SOX2_HMG_3	-10	0	-	0	0	.
chr9	8284954	8284955	chr9:8284955:G:A	rs7872167	G	A	A	SOX2_HMG_3	23	0	-	0	0	.
chr9	8284964	8284965	chr9:8284965:G:T	rs7872172	G	T	T	SOX2_HMG_3	13	1	-	3.805335610127164	3.805335610127164	AAGCAATTTTAGTCATT
chr9	8349521	8349522	chr9:8349522:T:A	rs186660828	T	A	T	SOX2_HMG_3	32	0	+	0	0	.
chr9	8407582	8407583	chr9:8407583:C:T	rs1875239	C	T	C	SOX2_HMG_3	22	0	-	0	0	.
chr9	8475676	8475677	chr9:8475677:T:C	rs10977146	T	C	T	SOX2_HMG_3	-10	0	-	0	0	.
chr9	8695438	8695439	chr9:8695439:A:C	rs12685924	A	C	A	SOX2_HMG_3	-15	0	+	0	0	.
chr9	8695997	8695998	chr9:8695998:A:G	rs1368982	A	G	G	SOX2_HMG_3	30	0	+	0	0	.
chr9	8718398	8718399	chr9:8718399:T:C	rs78996106	T	C	T	SOX2_HMG_3	5	1	-	3.8676370717425335	-3.041117707572687	TTTCAATTGTTGTGATT
chr9	8778521	8778522	chr9:8778522:A:C	rs10977296	A	C	A	SOX2_HMG_3	-11	0	-	0	0	.
chr9	8851129	8851130	chr9:8851130:T:C	rs185992145	T	C	T	SOX2_HMG_3	19	0	+	0	0	.
chr9	8895410	8895411	chr9:8895411:G:C	rs72704370	G	C	G	SOX2_HMG_3	-16	0	+	0	0	.
chr9	8980953	8980954	chr9:8980954:G:A	rs77755870	G	A	G	SOX2_HMG_3	9	1	-	4.234150605419334	5.040820739356381	TGTCAATGTCAGTTTTA
chr9	9341578	9341579	chr9:9341579:C:T	chr9:9341579:C:T	C	T	C	SOX2_HMG_3	11	1	-	3.508690703215107	-1.7669208257972917	TGTCAATTCAAGTGGGT
chr9	9425189	9425190	chr9:9425190:T:C	rs4742599	T	C	C	SOX2_HMG_3	6	1	+	4.988478370093398	-1.9202764092218239	CATCCATTTTATTGTGG
chr9	9425197	9425198	chr9:9425198:T:A	rs4742600	T	A	A	SOX2_HMG_3	14	1	+	4.988478370093398	7.701252214907692	CATCCATTTTATTGTGG
chr9	9537064	9537065	chr9:9537065:T:C	rs16929670	T	C	C	SOX2_HMG_3	0	1	-	5.991664971334282	6.212259250419576	AAGCAGTGGTATTGAGA
chr9	9726250	9726251	chr9:9726251:A:C	rs7048068	A	C	A	SOX2_HMG_3	14	1	-	6.139533314418968	4.670429541932142	TGCCAATGTCAGTGTTA
chr9	9912826	9912827	chr9:9912827:A:C	rs10816229	A	C	A	SOX2_HMG_3	-3	0	-	0	0	.
chr9	9919287	9919288	chr9:9919288:G:C	rs10978087	G	C	g	SOX2_HMG_3	17	0	-	0	0	.
chr9	9951279	9951280	chr9:9951280:G:A	rs73643834	G	A	G	SOX2_HMG_3	-2	0	+	0	0	.
chr9	10174316	10174317	chr9:10174317:C:T	rs35968521	C	T	T	SOX2_HMG_3	22	0	+	0	0	.
chr9	10232976	10232977	chr9:10232977:C:G	rs1322140	C	G	G	SOX2_HMG_3	11	1	-	4.389499313036377	-0.8861122159760209	GTTGAATGCCAGTGAGG
chr9	10538374	10538375	chr9:10538375:T:A	rs10156436	T	A	T	SOX2_HMG_3	-5	0	-	0	0	.
chr9	10583826	10583827	chr9:10583827:G:A	rs78588749	G	A	G	SOX2_HMG_3	33	0	+	0	0	.
chr9	10843307	10843308	chr9:10843308:G:T	rs10756139	G	T	G	SOX2_HMG_3	-14	0	-	0	0	.
chr9	11097561	11097562	chr9:11097562:T:C	rs2382262	T	C	T	SOX2_HMG_3	-2	0	-	0	0	.
chr9	11103596	11103597	chr9:11103597:G:A	rs113655831	G	A	G	SOX2_HMG_3	-2	0	+	0	0	.
chr9	11182057	11182058	chr9:11182058:A:G	rs2046765	A	G	A	SOX2_HMG_3	-4	0	-	0	0	.
chr9	11182061	11182062	chr9:11182062:T:A	rs12004689	T	A	T	SOX2_HMG_3	-8	0	-	0	0	.
chr9	11871389	11871390	chr9:11871390:T:C	rs186336086	T	C	T	SOX2_HMG_3	5	1	-	2.929859675258493	-3.9788951040567273	AATCAATGTCAAAGAAA
chr9	11962622	11962623	chr9:11962623:T:A	rs73646822	T	A	t	SOX2_HMG_3	5	1	-	5.69953685350257	-1.20921792581265	AACCAATGTTATTCAAG
chr9	12035754	12035755	chr9:12035755:C:G	rs12684064	C	G	C	SOX2_HMG_3	15	1	-	6.336452912147032	5.161119774237797	AGTCAATTTTAATGAGA
chr9	12274757	12274758	chr9:12274758:C:A	rs537325334	C	A	C	SOX2_HMG_3	21	0	-	0	0	.
chr9	12274773	12274774	chr9:12274774:T:C	rs12555009	T	C	T	SOX2_HMG_3	5	1	-	9.090265388191657	2.1815106088764358	TCTCAATGCAAGTGAGA
chr9	12274794	12274795	chr9:12274795:C:T	rs142335293	C	T	C	SOX2_HMG_3	-16	0	-	0	0	.
chr9	12319299	12319300	chr9:12319300:G:A	rs10960592	G	A	A	SOX2_HMG_3	-5	0	+	0	0	.
chr9	12405390	12405391	chr9:12405391:T:C	rs1331349	T	C	T	SOX2_HMG_3	-20	0	+	0	0	.
chr9	12599560	12599561	chr9:12599561:C:T	rs13283146	C	T	C	SOX2_HMG_3	-2	0	-	0	0	.
chr9	12681640	12681641	chr9:12681641:G:C	rs10738288	G	C	C	SOX2_HMG_3	-10	0	-	0	0	.
chr9	12717405	12717406	chr9:12717406:G:A	rs12379024	G	A	G	SOX2_HMG_3	0	1	+	5.088163951748977	4.8675696726636835	GACCAAAGACATTGATA
chr9	12735666	12735667	chr9:12735667:G:T	rs7047704	G	T	G	SOX2_HMG_3	0	1	+	4.4985243076246695	3.616128427864683	GCTCAAAGTTATTGTGA
chr9	12775414	12775415	chr9:12775415:T:C	chr9:12775415:T:C	T	C	T	SOX2_HMG_3	6	1	+	3.261152674671118	-3.6476021046441014	CTGCAATATCAGTGAAC
chr9	12777862	12777863	chr9:12777863:G:A	rs10960792	G	A	A	SOX2_HMG_3	-17	0	+	0	0	.
chr9	12777909	12777910	chr9:12777910:T:C	rs10809841	T	C	C	SOX2_HMG_3	30	0	+	0	0	.
chr9	12794833	12794834	chr9:12794834:G:A	rs1887174	G	A	A	SOX2_HMG_3	-19	0	+	0	0	.
chr9	12972997	12972998	chr9:12972998:C:T	rs113193298	C	T	C	SOX2_HMG_3	-6	0	+	0	0	.
chr9	13312370	13312371	chr9:13312371:A:G	rs10961020	A	G	A	SOX2_HMG_3	-7	0	-	0	0	.
chr9	13451243	13451244	chr9:13451244:A:G	rs2184230	A	G	G	SOX2_HMG_3	14	1	+	4.144679788713439	-0.037197828587680615	AGTCATTGAAATTGACA
chr9	13975374	13975375	chr9:13975375:C:T	rs11793194	C	T	C	SOX2_HMG_3	28	0	-	0	0	.
chr9	14022404	14022405	chr9:14022405:G:T	rs10810078	G	T	G	SOX2_HMG_3	23	0	-	0	0	.
chr9	14064502	14064503	chr9:14064503:G:T	rs513997	G	T	T	SOX2_HMG_3	-3	0	-	0	0	.
chr9	14155541	14155542	chr9:14155542:G:A	rs12553346	G	A	G	SOX2_HMG_3	-7	0	-	0	0	.
chr9	14402629	14402630	chr9:14402630:C:T	rs74725663	C	T	C	SOX2_HMG_3	-7	0	+	0	0	.
chr9	14814668	14814669	chr9:14814669:T:C	rs147801323	T	C	T	SOX2_HMG_3	-13	0	+	0	0	.
chr9	14818798	14818799	chr9:14818799:G:T	rs7019481	G	T	G	SOX2_HMG_3	20	0	-	0	0	.
chr9	15176943	15176944	chr9:15176944:G:A	rs76724127	G	A	G	SOX2_HMG_3	16	1	+	9.09028964808824	8.816602031697968	CATCAATGCTACTGAGG
chr9	15525196	15525197	chr9:15525197:C:G	rs1828382	C	G	C	SOX2_HMG_3	19	0	+	0	0	.
chr9	15966437	15966438	chr9:15966438:G:T	rs2987011	G	T	T	SOX2_HMG_3	34	0	-	0	0	.
chr9	16003090	16003091	chr9:16003091:C:A	rs73413991	C	A	C	SOX2_HMG_3	-17	0	+	0	0	.
chr9	16098364	16098365	chr9:16098365:A:G	rs75443270	A	G	A	SOX2_HMG_3	-12	0	-	0	0	.
chr9	16257740	16257741	chr9:16257741:A:G	rs78112129	A	G	A	SOX2_HMG_3	11	1	-	6.912173535695361	0.2194820374630138	GGTAAATGGCATTGAGT
chr9	16336473	16336474	chr9:16336474:A:T	rs66838939	A	T	T	SOX2_HMG_3	7	1	+	9.076434070480264	9.760510686308063	AACCAATATTATTGAAT
chr9	16515298	16515299	chr9:16515299:G:A	rs76982071	G	A	G	SOX2_HMG_3	-15	0	+	0	0	.
chr9	16986265	16986266	chr9:16986266:A:G	rs1487511	A	G	A	SOX2_HMG_3	-15	0	+	0	0	.
chr9	16986266	16986267	chr9:16986267:T:C	rs1487510	T	C	C	SOX2_HMG_3	-14	0	+	0	0	.
chr9	17230087	17230088	chr9:17230088:G:A	rs10962917	G	A	A	SOX2_HMG_3	-10	0	+	0	0	.
chr9	17578467	17578468	chr9:17578468:C:T	rs147382180	C	T	C	SOX2_HMG_3	35	0	-	0	0	.
chr9	17578503	17578504	chr9:17578504:C:T	rs3758217	C	T	T	SOX2_HMG_3	-1	0	-	0	0	.
chr9	17674873	17674874	chr9:17674874:G:A	rs4418424	G	A	A	SOX2_HMG_3	32	0	-	0	0	.
chr9	17674920	17674921	chr9:17674921:G:C	rs4601434	G	C	C	SOX2_HMG_3	-15	0	-	0	0	.
chr9	17810447	17810448	chr9:17810448:A:G	rs142247745	A	G	A	SOX2_HMG_3	14	1	+	2.985271103438881	-1.1966065138622384	TCACAGTGTTAGTGATG
chr9	17828438	17828439	chr9:17828439:T:C	rs7041618	T	C	T	SOX2_HMG_3	17	0	+	0	0	.
chr9	17965724	17965725	chr9:17965725:T:C	rs16936157	T	C	T	SOX2_HMG_3	-18	0	-	0	0	.
chr9	18115482	18115483	chr9:18115483:A:T	rs117285455	A	T	A	SOX2_HMG_3	-18	0	+	0	0	.
chr9	18142396	18142397	chr9:18142397:G:A	rs79811056	G	A	G	SOX2_HMG_3	19	0	+	0	0	.
chr9	18296815	18296816	chr9:18296816:C:T	rs192566528	C	T	C	SOX2_HMG_3	-15	0	+	0	0	.
chr9	18428942	18428943	chr9:18428943:G:A	rs145690887	G	A	G	SOX2_HMG_3	-11	0	-	0	0	.
chr9	18739844	18739845	chr9:18739845:C:T	rs2482970	C	T	C	SOX2_HMG_3	-14	0	+	0	0	.
chr9	18921538	18921539	chr9:18921539:T:C	rs10963841	T	C	T	SOX2_HMG_3	18	0	+	0	0	.
chr9	18926609	18926610	chr9:18926610:A:C	rs4977465	A	C	A	SOX2_HMG_3	-16	0	-	0	0	.
chr9	19051969	19051970	chr9:19051970:T:A	rs10123520	T	A	T	SOX2_HMG_3	-4	0	-	0	0	.
chr9	19269668	19269669	chr9:19269669:A:C	rs185582748	A	C	-	SOX2_HMG_3	11	1	-	5.072372141205115	3.655292171985167	GCTCAATGAAATTCAAG
chr9	19492974	19492975	chr9:19492975:A:G	rs10117909	A	G	A	SOX2_HMG_3	10	1	+	3.5604459047919215	-3.348308874523299	CATGAATGGCATAGATG
chr9	19867615	19867616	chr9:19867616:A:C	rs10964321	A	C	A	SOX2_HMG_3	21	0	+	0	0	.
chr9	20220401	20220402	chr9:20220402:C:T	rs10964478	C	T	C	SOX2_HMG_3	-4	0	-	0	0	.
chr9	20220402	20220403	chr9:20220403:C:T	rs10465019	C	T	C	SOX2_HMG_3	-5	0	-	0	0	.
chr9	20284947	20284948	chr9:20284948:T:A	rs10811341	T	A	A	SOX2_HMG_3	-8	0	-	0	0	.
chr9	20315736	20315737	chr9:20315737:T:C	rs7854752	T	C	T	SOX2_HMG_3	33	0	-	0	0	.
chr9	20321212	20321213	chr9:20321213:C:T	rs1034585	C	T	T	SOX2_HMG_3	29	0	+	0	0	.
chr9	21199680	21199681	chr9:21199681:G:T	rs4977686	G	T	g	SOX2_HMG_3	-2	0	-	0	0	.
chr9	21642590	21642591	chr9:21642591:A:G	rs10757229	A	G	-	SOX2_HMG_3	0	1	+	7.169526787459375	7.390121066544669	AATCAAAGCAATTGAAT
chr9	21782164	21782165	chr9:21782165:G:A	rs10811615	G	A	A	SOX2_HMG_3	17	0	-	0	0	.
chr9	22115026	22115027	chr9:22115027:A:G	rs2383206	A	G	A	SOX2_HMG_3	18	0	+	0	0	.
chr9	22214943	22214944	chr9:22214944:T:C	rs7024945	T	C	T	SOX2_HMG_3	6	1	+	2.383395819878955	-4.525358959436264	GATCTATAGTATTCATG
chr9	22417161	22417162	chr9:22417162:G:C	rs7875770	G	C	C	SOX2_HMG_3	3	1	-	5.659681312416596	-1.2490734668986248	AATCAATATAAGAGATA
chr9	22990144	22990145	chr9:22990145:C:T	rs2126637	C	T	T	SOX2_HMG_3	13	1	-	3.8924116967756626	-3.016343082539557	CAAAAATGGTATTGTTT
chr9	23163049	23163050	chr9:23163050:A:G	rs1114420	A	G	A	SOX2_HMG_3	-20	0	+	0	0	.
chr9	23197976	23197977	chr9:23197977:T:C	rs10738653	T	C	T	SOX2_HMG_3	4	1	+	8.154069667492408	8.154069667492408	AGTCTATGCCATTGATA
chr9	23471508	23471509	chr9:23471509:T:C	chr9:23471509:T:C	T	C	T	SOX2_HMG_3	34	0	-	0	0	.
chr9	23471509	23471510	chr9:23471510:T:G	chr9:23471510:T:G	T	G	T	SOX2_HMG_3	33	0	-	0	0	.
chr9	24618736	24618737	chr9:24618737:C:T	rs7849331	C	T	C	SOX2_HMG_3	36	0	+	0	0	.
chr9	24649222	24649223	chr9:24649223:C:G	rs1332675	C	G	C	SOX2_HMG_3	7	1	-	3.059941071275707	-3.6729011401602683	AGTCAAGGGTATTTATG
chr9	25189608	25189609	chr9:25189609:G:A	rs7865045	G	A	G	SOX2_HMG_3	30	0	+	0	0	.
chr9	25189614	25189615	chr9:25189615:T:C	rs9406855	T	C	C	SOX2_HMG_3	36	0	+	0	0	.
chr9	25393679	25393680	chr9:25393680:C:G	rs10757524	C	G	G	SOX2_HMG_3	24	0	-	0	0	.
chr9	25576546	25576547	chr9:25576547:C:A	rs10757554	C	A	C	SOX2_HMG_3	13	1	-	4.565668179741524	-2.3430865995736956	GGTTAATTCCATTGAAT
chr9	25602722	25602723	chr9:25602723:C:G	rs1986439	C	G	C	SOX2_HMG_3	21	0	-	0	0	.
chr9	26188158	26188159	chr9:26188159:G:C	rs1579573	G	C	C	SOX2_HMG_3	-19	0	+	0	0	.
chr9	26565914	26565915	chr9:26565915:A:C	rs1887221	A	C	A	SOX2_HMG_3	16	1	-	5.023756647481477	5.826827089257668	AAGCAATGTGATTGTTT
chr9	27467764	27467765	chr9:27467765:G:A	rs7873548	G	A	A	SOX2_HMG_3	28	0	-	0	0	.
chr9	27499628	27499629	chr9:27499629:C:A	rs2492812	C	A	T	SOX2_HMG_3	22	0	-	0	0	.
chr9	27690362	27690363	chr9:27690363:T:C	rs11794463	T	C	T	SOX2_HMG_3	-2	0	-	0	0	.
chr9	27785865	27785866	chr9:27785866:G:A	rs2773417	G	A	a	SOX2_HMG_3	24	0	+	0	0	.
chr9	27963934	27963935	chr9:27963935:G:T	rs181266629	G	T	G	SOX2_HMG_3	26	0	+	0	0	.
chr9	27980242	27980243	chr9:27980243:C:A	rs7018499	C	A	C	SOX2_HMG_3	36	0	-	0	0	.
chr9	28058181	28058182	chr9:28058182:G:A	rs2167643	G	A	G	SOX2_HMG_3	7	1	+	3.3910755183582233	0.6622883977968892	GATCAAAGTATTTGATG
chr9	28446609	28446610	chr9:28446610:C:T	rs10812830	C	T	C	SOX2_HMG_3	-2	0	-	0	0	.
chr9	28603862	28603863	chr9:28603863:T:A	rs72715215	T	A	T	SOX2_HMG_3	-13	0	+	0	0	.
chr9	28887251	28887252	chr9:28887252:C:G	rs4352929	C	G	C	SOX2_HMG_3	19	0	+	0	0	.
chr9	29021956	29021957	chr9:29021957:A:T	rs7864577	A	T	T	SOX2_HMG_3	7	1	-	4.671816795041779	3.98774017921398	CCTCAATTTTTGTGATA
chr9	29070446	29070447	chr9:29070447:T:C	rs60571108	T	C	T	SOX2_HMG_3	0	1	+	3.714279061663171	3.8516080397118353	TGGCAATGGTAATGAGA
chr9	29078513	29078514	chr9:29078514:C:G	rs13296159	C	G	C	SOX2_HMG_3	29	0	-	0	0	.
chr9	29183734	29183735	chr9:29183735:T:C	rs1342247	T	C	C	SOX2_HMG_3	-10	0	-	0	0	.
chr9	29472688	29472689	chr9:29472689:C:T	rs529598330	C	T	C	SOX2_HMG_3	24	0	-	0	0	.
chr9	29472721	29472722	chr9:29472722:T:A	rs549860029	T	A	T	SOX2_HMG_3	-9	0	-	0	0	.
chr9	29472728	29472729	chr9:29472729:C:T	rs55971094	C	T	C	SOX2_HMG_3	-16	0	-	0	0	.
chr9	29692247	29692248	chr9:29692248:G:A	rs57255353	G	A	G	SOX2_HMG_3	28	0	-	0	0	.
chr9	30366575	30366576	chr9:30366576:T:A	rs10114595	T	A	A	SOX2_HMG_3	26	0	-	0	0	.
chr9	30587689	30587690	chr9:30587690:C:T	rs12378080	C	T	T	SOX2_HMG_3	30	0	+	0	0	.
chr9	30844311	30844312	chr9:30844312:A:C	rs10969889	A	C	C	SOX2_HMG_3	4	1	+	1.7888672700548012	-5.119887509260417	GAACAATGGGAGTGGAG
chr9	31030959	31030960	chr9:31030960:T:G	rs550708606	T	G	T	SOX2_HMG_3	6	1	+	5.668524556345059	-1.2402302229701614	CAGCAATGCCAGTGGAA
chr9	31350128	31350129	chr9:31350129:C:T	rs16924059	C	T	C	SOX2_HMG_3	7	1	-	3.1146195547083195	0.3858324341469852	AGGCAATGGTATTTTTA
chr9	31579050	31579051	chr9:31579051:T:C	rs7024441	T	C	T	SOX2_HMG_3	-12	0	+	0	0	.
chr9	31689463	31689464	chr9:31689464:A:G	rs34274781	A	G	A	SOX2_HMG_3	-6	0	-	0	0	.
chr9	32378957	32378958	chr9:32378958:A:G	rs10813801	A	G	A	SOX2_HMG_3	5	1	+	4.955666818273443	-1.9530879610417775	TAACAATGGCATAGAAA
chr9	32787721	32787722	chr9:32787722:C:T	rs214130	C	T	C	SOX2_HMG_3	1	1	-	6.139452181428797	7.971099771508087	TGTCTATTATATTGATA
chr9	33028978	33028979	chr9:33028979:C:T	rs12377889	C	T	C	SOX2_HMG_3	27	0	+	0	0	.
chr9	33137597	33137598	chr9:33137598:A:C	rs10813954	A	C	C	SOX2_HMG_3	10	1	-	3.462982082877219	3.462982082877219	AAGCAATTCTTGTGATA
chr9	33425386	33425387	chr9:33425387:G:A	rs4878538	G	A	G	SOX2_HMG_3	-6	0	+	0	0	.
chr9	33427702	33427703	chr9:33427703:T:C	rs10813977	T	C	T	SOX2_HMG_3	28	0	+	0	0	.
chr9	33460847	33460848	chr9:33460848:T:C	rs10971520	T	C	T	SOX2_HMG_3	-20	0	+	0	0	.
chr9	33466868	33466869	chr9:33466869:T:C	rs116924567	T	C	t	SOX2_HMG_3	29	0	-	0	0	.
chr9	33624358	33624359	chr9:33624359:C:T	rs7865060	C	T	.	SOX2_HMG_3	17	0	-	0	0	.
chr9	33795787	33795788	chr9:33795788:T:G	rs855579	T	G	T	SOX2_HMG_3	34	0	-	0	0	.
chr9	33795809	33795810	chr9:33795810:A:G	rs2075584	A	G	A	SOX2_HMG_3	12	1	-	4.766266051933767	-2.1424887273814526	GATGAATGACAGTGGTG
chr9	33795823	33795824	chr9:33795824:A:C	rs899853332	A	C	A	SOX2_HMG_3	-2	0	-	0	0	.
chr9	33896078	33896079	chr9:33896079:A:G	rs34576091	A	G	A	SOX2_HMG_3	-18	0	+	0	0	.
chr9	34378178	34378179	chr9:34378179:C:T	rs3892022	C	T	C	SOX2_HMG_3	-16	0	-	0	0	.
chr9	34568858	34568859	chr9:34568859:G:A	rs41274859	G	A	G	SOX2_HMG_3	33	0	+	0	0	.
chr9	34771232	34771233	chr9:34771233:T:G	rs117042148	T	G	T	SOX2_HMG_3	33	0	+	0	0	.
chr9	34832353	34832354	chr9:34832354:G:A	rs117899166	G	A	G	SOX2_HMG_3	25	0	+	0	0	.
chr9	34960171	34960172	chr9:34960172:C:T	rs145637357	C	T	C	SOX2_HMG_3	-18	0	+	0	0	.
chr9	34961473	34961474	chr9:34961474:A:G	rs7025995	A	G	A	SOX2_HMG_3	-8	0	-	0	0	.
chr9	34985493	34985494	chr9:34985494:G:A	rs73497327	G	A	G	SOX2_HMG_3	29	0	-	0	0	.
chr9	35141154	35141155	chr9:35141155:G:A	rs10972340	G	A	g	SOX2_HMG_3	14	1	+	3.356169609962513	7.538047227263631	TTTCAATTGCAGTGGAC
chr9	35651599	35651600	chr9:35651600:G:T	rs10972546	G	T	G	SOX2_HMG_3	13	1	+	4.413010599782954	-2.495744179532266	GTGCAAGGCTATTGATG
chr9	35696078	35696079	chr9:35696079:A:G	rs2145924	A	G	A	SOX2_HMG_3	11	1	-	3.374350650767312	-3.3183408474650355	ATTCAATGTCATAGTAT
chr9	35815201	35815202	chr9:35815202:A:G	chr9:35815202:A:G	A	G	A	SOX2_HMG_3	18	0	-	0	0	.
chr9	36031185	36031186	chr9:36031186:A:T	rs7039141	A	T	a	SOX2_HMG_3	12	1	-	3.9041269382186594	-3.00462784109656	GTTCAAAGACAGTGAAT
chr9	36031186	36031187	chr9:36031187:C:T	rs7039239	C	T	t	SOX2_HMG_3	11	1	-	3.9041269382186594	-1.3714845907937379	GTTCAAAGACAGTGAAT
chr9	36175049	36175050	chr9:36175050:G:A	rs890312773	G	A	G	SOX2_HMG_3	16	1	+	3.1505938444157375	2.876906228025466	GAGCACTTCCAGTGATG
chr9	36359643	36359644	chr9:36359644:C:T	rs16933238	C	T	C	SOX2_HMG_3	-7	0	+	0	0	.
chr9	36904771	36904772	chr9:36904772:G:A	rs7031673	G	A	G	SOX2_HMG_3	-16	0	-	0	0	.
chr9	37187958	37187959	chr9:37187959:C:A	rs116324989	C	A	C	SOX2_HMG_3	-18	0	+	0	0	.
chr9	37289934	37289935	chr9:37289935:A:C	rs10973289	A	C	A	SOX2_HMG_3	-18	0	+	0	0	.
chr9	37437765	37437766	chr9:37437766:C:G	rs117306138	C	G	C	SOX2_HMG_3	-11	0	-	0	0	.
chr9	37575217	37575218	chr9:37575218:T:C	rs546041455	T	C	T	SOX2_HMG_3	15	1	+	4.262564073188303	1.4198549170114438	GCTCAAGTAAATTGATG
chr9	37693959	37693960	chr9:37693960:C:T	rs7025444	C	T	T	SOX2_HMG_3	11	1	-	1.9920289539842155	-3.2835825750281833	GCACAATGCCAGTGCTA
chr9	37876494	37876495	chr9:37876495:T:C	rs73451233	T	C	T	SOX2_HMG_3	16	1	+	5.216810253292095	4.020038200151741	AGTCAATTTCATTCAAT
chr9	38058667	38058668	chr9:38058668:G:A	rs1928244	G	A	G	SOX2_HMG_3	20	0	+	0	0	.
chr9	38187010	38187011	chr9:38187011:G:A	rs10973694	G	A	A	SOX2_HMG_3	16	1	+	2.9608345384491406	2.6871469220588695	GATCAATGCTTGAGATG
chr9	38307485	38307486	chr9:38307486:A:G	rs486764	A	G	G	SOX2_HMG_3	8	1	-	3.4862505284696357	2.6145141758337727	AGTCAAGATCAGTGAGG
chr9	38713590	38713591	chr9:38713591:G:A	rs10814744	G	A	G	SOX2_HMG_3	-17	0	+	0	0	.
chr9	39036298	39036299	chr9:39036299:C:G	rs414044	C	G	-	SOX2_HMG_3	3	1	+	15.198303077970843	8.289548298655621	TATCAATGTTATTGTTA
chr9	39038534	39038535	chr9:39038535:T:C	rs62567338	T	C	T	SOX2_HMG_3	35	0	-	0	0	.
chr9	39828562	39828563	chr9:39828563:A:C	rs28696198	A	C	A	SOX2_HMG_3	-17	0	+	0	0	.
chr9	41053926	41053927	chr9:41053927:C:A	rs55742906	C	A	C	SOX2_HMG_3	13	1	-	5.0849476594824505	-1.8238071198327697	AAGCAACTGTATTGATT
chr9	41648372	41648373	chr9:41648373:C:G	rs1164981139	C	G	C	SOX2_HMG_3	-12	0	+	0	0	.
chr9	41806907	41806908	chr9:41806908:T:A	rs7847914	T	A	.	SOX2_HMG_3	-7	0	+	0	0	.
chr9	41806944	41806945	chr9:41806945:C:G	rs560711265	C	G	.	SOX2_HMG_3	30	0	+	0	0	.
chr9	42160447	42160448	chr9:42160448:T:C	rs144621459	T	C	t	SOX2_HMG_3	6	1	+	2.4921099332938272	-4.416644846021393	CAGCAATGCTCTTGGTG
chr9	60545748	60545749	chr9:60545749:A:G	rs28775016	A	G	.	SOX2_HMG_3	32	0	-	0	0	.
chr9	67823054	67823055	chr9:67823055:A:T	rs28622931	A	T	.	SOX2_HMG_3	19	0	-	0	0	.
chr9	67823071	67823072	chr9:67823072:A:G	rs28533967	A	G	.	SOX2_HMG_3	2	1	-	5.619647137412666	0.6162750670970786	TATCAATAATATAGAGA
chr9	68533694	68533695	chr9:68533695:T:C	rs148536917	T	C	T	SOX2_HMG_3	10	1	-	3.079234181375605	-3.8295205979396156	CAGCAATGGAATGGAGT
chr9	68904503	68904504	chr9:68904504:A:G	rs10746969	A	G	A	SOX2_HMG_3	32	0	-	0	0	.
chr9	68904554	68904555	chr9:68904555:T:C	rs11144206	T	C	T	SOX2_HMG_3	-19	0	-	0	0	.
chr9	69248121	69248122	chr9:69248122:C:T	rs140442228	C	T	C	SOX2_HMG_3	31	0	-	0	0	.
chr9	69577274	69577275	chr9:69577275:G:A	rs374444510	G	A	G	SOX2_HMG_3	30	0	+	0	0	.
chr9	69622706	69622707	chr9:69622707:C:T	rs569486605	C	T	C	SOX2_HMG_3	14	1	+	2.5394674616883894	6.658992322440788	CATCTATGTCATTGCAG
chr9	69743510	69743511	chr9:69743511:A:T	rs10120561	A	T	A	SOX2_HMG_3	26	0	-	0	0	.
chr9	69745990	69745991	chr9:69745991:C:A	rs10119846	C	A	A	SOX2_HMG_3	27	0	-	0	0	.
chr9	69892142	69892143	chr9:69892143:G:A	rs4744952	G	A	A	SOX2_HMG_3	-3	0	+	0	0	.
chr9	70034293	70034294	chr9:70034294:G:C	rs12553082	G	C	C	SOX2_HMG_3	-15	0	+	0	0	.
chr9	70414417	70414418	chr9:70414418:G:C	rs115977087	G	C	G	SOX2_HMG_3	22	0	-	0	0	.
chr9	70414429	70414430	chr9:70414430:T:C	rs1205461121	T	C	T	SOX2_HMG_3	10	1	-	5.799663251095234	-1.1090915282199865	AGCCAATGCCAGTGACA
chr9	70609643	70609644	chr9:70609644:C:T	rs10114679	C	T	C	SOX2_HMG_3	-5	0	+	0	0	.
chr9	70964444	70964445	chr9:70964445:T:C	rs35806768	T	C	T	SOX2_HMG_3	5	1	-	4.834211682427497	-2.074543096887723	CAGCAATGATACTGAGA
chr9	71029899	71029900	chr9:71029900:A:G	rs11142672	A	G	a	SOX2_HMG_3	30	0	+	0	0	.
chr9	71486549	71486550	chr9:71486550:T:C	rs7873132	T	C	C	SOX2_HMG_3	-20	0	-	0	0	.
chr9	71492181	71492182	chr9:71492182:T:C	rs10123278	T	C	T	SOX2_HMG_3	10	1	-	4.755368964829388	-2.1533858144858327	AATGAATGTTATAGATA
chr9	71684723	71684724	chr9:71684724:G:C	rs12237894	G	C	G	SOX2_HMG_3	-11	0	-	0	0	.
chr9	71742529	71742530	chr9:71742530:C:T	rs118079430	C	T	C	SOX2_HMG_3	16	1	+	3.616634521613702	4.8134065747540555	CGTCAATGCAATGGAAC
chr9	72130299	72130300	chr9:72130300:T:G	rs4237252	T	G	T	SOX2_HMG_3	-8	0	-	0	0	.
chr9	72217566	72217567	chr9:72217567:A:C	rs113575124	A	C	A	SOX2_HMG_3	24	0	+	0	0	.
chr9	72293610	72293611	chr9:72293611:C:A	rs12380305	C	A	A	SOX2_HMG_3	30	0	+	0	0	.
chr9	72363063	72363064	chr9:72363064:G:A	rs909172	G	A	G	SOX2_HMG_3	-19	0	+	0	0	.
chr9	72396816	72396817	chr9:72396817:A:G	rs10869172	A	G	A	SOX2_HMG_3	29	0	+	0	0	.
chr9	72827451	72827452	chr9:72827452:A:G	rs116010353	A	G	A	SOX2_HMG_3	29	0	-	0	0	.
chr9	73152668	73152669	chr9:73152669:A:T	rs75902196	A	T	A	SOX2_HMG_3	4	1	+	2.568017093438224	-4.340737685876995	GGGGAATGTCAGTGAGG
chr9	73156488	73156489	chr9:73156489:A:G	chr9:73156489:A:G	A	G	A	SOX2_HMG_3	14	1	+	6.577411369630738	2.395533752329618	TATCAATTATATTTAGG
chr9	73179661	73179662	chr9:73179662:T:C	rs138721150	T	C	T	SOX2_HMG_3	-8	0	+	0	0	.
chr9	73242489	73242490	chr9:73242490:G:T	rs7850771	G	T	T	SOX2_HMG_3	-17	0	-	0	0	.
chr9	73822693	73822694	chr9:73822694:C:G	rs78729146	C	G	C	SOX2_HMG_3	12	1	-	4.442980726367907	4.442980726367907	GATCAAGGTCATGGATG
chr9	74200393	74200394	chr9:74200394:T:A	rs4263838	T	A	A	SOX2_HMG_3	11	1	+	11.177076449895663	4.484384951663315	AGTCAATTTCATTGTTA
chr9	74562690	74562691	chr9:74562691:C:T	rs972903	C	T	t	SOX2_HMG_3	-4	0	+	0	0	.
chr9	74828507	74828508	chr9:74828508:A:G	rs17060568	A	G	A	SOX2_HMG_3	-4	0	+	0	0	.
chr9	74946798	74946799	chr9:74946799:G:C	rs113259722	G	C	G	SOX2_HMG_3	31	0	-	0	0	.
chr9	75396824	75396825	chr9:75396825:G:A	rs75718389	G	A	G	SOX2_HMG_3	13	1	+	3.846347382910691	-3.0624073964045295	GGGCAATAAAATTGTAG
chr9	75451791	75451792	chr9:75451792:G:A	rs73545847	G	A	G	SOX2_HMG_3	-10	0	-	0	0	.
chr9	75457844	75457845	chr9:75457845:T:C	rs4745404	T	C	C	SOX2_HMG_3	14	1	-	6.913634818509543	2.731757201208423	GGTGAATGGAAGTGATG
chr9	75488998	75488999	chr9:75488999:C:A	rs1854131	C	A	C	SOX2_HMG_3	15	1	+	7.469153039640833	9.07695975910097	ATTCAATTACAGTGACA
chr9	75570813	75570814	chr9:75570814:T:G	rs932984	T	G	G	SOX2_HMG_3	31	0	+	0	0	.
chr9	76108019	76108020	chr9:76108020:G:A	rs914367	G	A	G	SOX2_HMG_3	31	0	-	0	0	.
chr9	76155601	76155602	chr9:76155602:G:A	rs7047773	G	A	A	SOX2_HMG_3	15	1	+	1.893069886524298	2.3255434680751987	CATCAAAGGCATTCAGG
chr9	76631122	76631123	chr9:76631123:C:G	rs73650264	C	G	C	SOX2_HMG_3	27	0	-	0	0	.
chr9	76725383	76725384	chr9:76725384:G:C	rs4745576	G	C	C	SOX2_HMG_3	11	1	+	5.969778770635687	0.6941672416232882	GCTCAATGAAAGTGTCA
chr9	77252593	77252594	chr9:77252594:T:C	rs72744208	T	C	T	SOX2_HMG_3	-9	0	-	0	0	.
chr9	77417383	77417384	chr9:77417384:C:A	rs13286867	C	A	C	SOX2_HMG_3	-8	0	+	0	0	.
chr9	77530836	77530837	chr9:77530837:T:G	rs4745642	T	G	T	SOX2_HMG_3	-6	0	-	0	0	.
chr9	77596187	77596188	chr9:77596188:G:A	rs36024384	G	A	G	SOX2_HMG_3	24	0	-	0	0	.
chr9	77715801	77715802	chr9:77715802:G:C	rs4745664	G	C	C	SOX2_HMG_3	0	1	-	3.14653300171624	3.891599903427563	CAACACTGGCAGTGAAT
chr9	77854830	77854831	chr9:77854831:G:T	rs7048811	G	T	T	SOX2_HMG_3	29	0	+	0	0	.
chr9	77891723	77891724	chr9:77891724:T:C	rs2296936	T	C	T	SOX2_HMG_3	30	0	-	0	0	.
chr9	78559453	78559454	chr9:78559454:G:T	rs3009700	G	T	T	SOX2_HMG_3	-8	0	-	0	0	.
chr9	78821346	78821347	chr9:78821347:A:G	rs17081808	A	G	A	SOX2_HMG_3	-6	0	-	0	0	.
chr9	78924035	78924036	chr9:78924036:G:A	rs7874303	G	A	G	SOX2_HMG_3	-14	0	-	0	0	.
chr9	78976527	78976528	chr9:78976528:C:T	rs10867324	C	T	T	SOX2_HMG_3	1	1	-	3.4373159711232155	5.268963561202507	AGCCAATTGAAGTGACA
chr9	79201983	79201984	chr9:79201984:G:C	rs728987	G	C	T	SOX2_HMG_3	-14	0	+	0	0	.
chr9	79221499	79221500	chr9:79221500:G:A	rs273466	G	A	G	SOX2_HMG_3	34	0	+	0	0	.
chr9	79438146	79438147	chr9:79438147:T:C	rs1340123	T	C	T	SOX2_HMG_3	-10	0	-	0	0	.
chr9	79438150	79438151	chr9:79438151:C:T	rs13295991	C	T	C	SOX2_HMG_3	-14	0	-	0	0	.
chr9	79952896	79952897	chr9:79952897:T:C	rs17729057	T	C	T	SOX2_HMG_3	12	1	+	3.971445267776352	-2.9373095115388685	GAAGAATGGTATTGGTG
chr9	80366828	80366829	chr9:80366829:C:T	rs7027955	C	T	C	SOX2_HMG_3	32	0	-	0	0	.
chr9	80366869	80366870	chr9:80366870:C:T	rs7028064	C	T	C	SOX2_HMG_3	-9	0	-	0	0	.
chr9	80556900	80556901	chr9:80556901:T:G	rs1359987	T	G	G	SOX2_HMG_3	19	0	+	0	0	.
chr9	80679059	80679060	chr9:80679060:G:A	rs72751011	G	A	G	SOX2_HMG_3	11	1	+	4.86063810227285	-0.41497342673954773	GTACAATACCAGTGAAA
chr9	80754979	80754980	chr9:80754980:T:C	rs10491934	T	C	T	SOX2_HMG_3	8	1	-	4.13235192613773	4.981395873501359	TCTCAATGAAACTGAAA
chr9	80868136	80868137	chr9:80868137:T:G	rs76639411	T	G	T	SOX2_HMG_3	3	1	+	3.460068551300472	3.460068551300472	GATTAATGATGTTGATT
chr9	80868150	80868151	chr9:80868151:A:G	rs80082686	A	G	A	SOX2_HMG_3	17	0	+	0	0	.
chr9	80946258	80946259	chr9:80946259:G:C	rs17244636	G	C	G	SOX2_HMG_3	-15	0	+	0	0	.
chr9	80964552	80964553	chr9:80964553:T:C	rs727435	T	C	C	SOX2_HMG_3	26	0	-	0	0	.
chr9	81088502	81088503	chr9:81088503:G:A	rs10867694	G	A	A	SOX2_HMG_3	-11	0	-	0	0	.
chr9	81174325	81174326	chr9:81174326:T:C	rs10867703	T	C	T	SOX2_HMG_3	5	1	+	5.465967555607552	5.465967555607552	TACCATTGTCATTGATG
chr9	81531725	81531726	chr9:81531726:C:T	rs111810401	C	T	C	SOX2_HMG_3	33	0	+	0	0	.
chr9	81597426	81597427	chr9:81597427:C:A	rs78237454	C	A	C	SOX2_HMG_3	32	0	+	0	0	.
chr9	81752266	81752267	chr9:81752267:T:C	rs75122168	T	C	T	SOX2_HMG_3	32	0	-	0	0	.
chr9	82882924	82882925	chr9:82882925:G:C	rs17733409	G	C	G	SOX2_HMG_3	-17	0	-	0	0	.
chr9	83209655	83209656	chr9:83209656:C:A	rs11139965	C	A	C	SOX2_HMG_3	-18	0	-	0	0	.
chr9	83247903	83247904	chr9:83247904:G:A	rs78846594	G	A	G	SOX2_HMG_3	-16	0	-	0	0	.
chr9	83326629	83326630	chr9:83326630:T:A	rs56079822	T	A	T	SOX2_HMG_3	6	1	+	5.7600178726046245	-1.1487369067105968	GATCAATTAAATAGAAA
chr9	83469622	83469623	chr9:83469623:C:T	rs17086295	C	T	C	SOX2_HMG_3	-14	0	-	0	0	.
chr9	83474412	83474413	chr9:83474413:T:C	rs10120060	T	C	C	SOX2_HMG_3	-20	0	-	0	0	.
chr9	83639445	83639446	chr9:83639446:G:A	rs7866066	G	A	G	SOX2_HMG_3	26	0	+	0	0	.
chr9	83992654	83992655	chr9:83992655:T:C	rs73471387	T	C	T	SOX2_HMG_3	-17	0	+	0	0	.
chr9	83992698	83992699	chr9:83992699:G:A	chr9:83992699:G:A	G	A	G	SOX2_HMG_3	27	0	+	0	0	.
chr9	84169831	84169832	chr9:84169832:A:T	rs871228	A	T	T	SOX2_HMG_3	-7	0	-	0	0	.
chr9	84256331	84256332	chr9:84256332:T:C	chr9:84256332:T:C	T	C	T	SOX2_HMG_3	-17	0	-	0	0	.
chr9	84302172	84302173	chr9:84302173:T:C	rs4877836	T	C	T	SOX2_HMG_3	27	0	-	0	0	.
chr9	84397256	84397257	chr9:84397257:T:C	rs114296918	T	C	T	SOX2_HMG_3	24	0	-	0	0	.
chr9	84990870	84990871	chr9:84990871:G:A	rs11140821	G	A	G	SOX2_HMG_3	36	0	+	0	0	.
chr9	85377862	85377863	chr9:85377863:A:G	chr9:85377863:A:G	A	G	A	SOX2_HMG_3	-6	0	+	0	0	.
chr9	85377873	85377874	chr9:85377874:A:C	rs2814734	A	C	C	SOX2_HMG_3	5	1	+	3.7700569789813474	-3.1386978003338735	GGTCAATCAAAGTGAGT
chr9	85861160	85861161	chr9:85861161:A:G	rs72746629	A	G	A	SOX2_HMG_3	-11	0	+	0	0	.
chr9	86689589	86689590	chr9:86689590:A:G	rs2026341	A	G	A	SOX2_HMG_3	5	1	+	2.6026925737965083	-4.30606220551871	CAACAATGTATGTGAGG
chr9	86967866	86967867	chr9:86967867:A:G	rs62563157	A	G	G	SOX2_HMG_3	-16	0	+	0	0	.
chr9	87086439	87086440	chr9:87086440:G:A	rs760569968	G	A	G	SOX2_HMG_3	-11	0	-	0	0	.
chr9	87179489	87179490	chr9:87179490:C:T	rs278664	C	T	T	SOX2_HMG_3	-7	0	+	0	0	.
chr9	87181144	87181145	chr9:87181145:C:G	rs4878045	C	G	C	SOX2_HMG_3	16	1	-	5.064152673333524	3.0643101784169797	ATGCAATGTTGTTGATG
chr9	87370334	87370335	chr9:87370335:T:G	rs7861579	T	G	T	SOX2_HMG_3	-3	0	-	0	0	.
chr9	87428747	87428748	chr9:87428748:C:G	rs140756676	C	G	C	SOX2_HMG_3	0	1	-	3.718505645809929	2.973438744098607	GATCAATGGCAATTATT
chr9	87495909	87495910	chr9:87495910:T:G	rs1964911	T	G	T	SOX2_HMG_3	19	0	+	0	0	.
chr9	87518484	87518485	chr9:87518485:T:C	rs10868613	T	C	C	SOX2_HMG_3	2	1	+	8.950933581771759	3.9475615114561724	CGTCAATCTCATTGATG
chr9	87541930	87541931	chr9:87541931:C:T	rs1041326	C	T	C	SOX2_HMG_3	-2	0	+	0	0	.
chr9	87599906	87599907	chr9:87599907:T:C	rs75144902	T	C	T	SOX2_HMG_3	28	0	-	0	0	.
chr9	88090533	88090534	chr9:88090534:C:T	rs74616634	C	T	.	SOX2_HMG_3	-20	0	-	0	0	.
chr9	88115232	88115233	chr9:88115233:T:C	rs620889	T	C	.	SOX2_HMG_3	-2	0	-	0	0	.
chr9	88215668	88215669	chr9:88215669:T:C	rs2250871	T	C	T	SOX2_HMG_3	5	1	-	7.330452189686819	0.42169741037159864	GTTCAATGTTAATGAAT
chr9	88230860	88230861	chr9:88230861:C:A	rs73652529	C	A	C	SOX2_HMG_3	27	0	-	0	0	.
chr9	88583970	88583971	chr9:88583971:C:G	rs9410665	C	G	C	SOX2_HMG_3	-6	0	+	0	0	.
chr9	88583980	88583981	chr9:88583981:A:G	rs28496878	A	G	A	SOX2_HMG_3	4	1	+	4.785475545732821	-2.123279233582401	AGTCAATGGTATTTTGT
chr9	88661928	88661929	chr9:88661929:A:G	rs77485037	A	G	A	SOX2_HMG_3	-5	0	+	0	0	.
chr9	88749037	88749038	chr9:88749038:G:A	rs17054413	G	A	G	SOX2_HMG_3	-19	0	-	0	0	.
chr9	88808695	88808696	chr9:88808696:T:G	rs2653814	T	G	G	SOX2_HMG_3	2	1	-	6.815059749047671	5.679302513410124	AGACAATGCCATTGTGA
chr9	88936002	88936003	chr9:88936003:G:A	rs9792467	G	A	G	SOX2_HMG_3	-20	0	+	0	0	.
chr9	88960319	88960320	chr9:88960320:A:G	rs12338537	A	G	A	SOX2_HMG_3	36	0	-	0	0	.
chr9	88997663	88997664	chr9:88997664:T:A	rs72748922	T	A	T	SOX2_HMG_3	-9	0	-	0	0	.
chr9	89024611	89024612	chr9:89024612:C:T	rs116940659	C	T	C	SOX2_HMG_3	-17	0	+	0	0	.
chr9	89114097	89114098	chr9:89114098:T:C	rs73498185	T	C	T	SOX2_HMG_3	-15	0	+	0	0	.
chr9	89137699	89137700	chr9:89137700:T:C	rs112269322	T	C	T	SOX2_HMG_3	6	1	+	3.0793096155555872	-3.8294451637596323	TGAGAATGTCAGTGATA
chr9	89218427	89218428	chr9:89218428:G:A	rs7852045	G	A	G	SOX2_HMG_3	3	1	-	6.95959265448716	0.050837875171939606	GGTCGATGTAATTGAAA
chr9	89363675	89363676	chr9:89363676:C:T	rs76395868	C	T	C	SOX2_HMG_3	11	1	-	7.441297775845399	2.1656862468330007	TTACAATGGCAGTGAAA
chr9	89614190	89614191	chr9:89614191:A:G	rs955965	A	G	A	SOX2_HMG_3	29	0	+	0	0	.
chr9	89713443	89713444	chr9:89713444:A:G	rs117330674	A	G	A	SOX2_HMG_3	-2	0	+	0	0	.
chr9	89850652	89850653	chr9:89850653:T:C	rs984864038	T	C	C	SOX2_HMG_3	12	1	+	4.578090245729551	-2.3306645335856695	ACTCAATGAAGTTGAAA
chr9	89850665	89850666	chr9:89850666:C:T	rs964704234	C	T	C	SOX2_HMG_3	25	0	+	0	0	.
chr9	90220163	90220164	chr9:90220164:G:T	rs113246651	G	T	G	SOX2_HMG_3	-11	0	+	0	0	.
chr9	90331592	90331593	chr9:90331593:C:T	rs1777048	C	T	T	SOX2_HMG_3	11	1	-	6.7073095300959205	1.4316980010835225	GATCAATGGAAGGGAAT
chr9	90444454	90444455	chr9:90444455:C:A	rs7046597	C	A	A	SOX2_HMG_3	19	0	+	0	0	.
chr9	90640234	90640235	chr9:90640235:A:T	rs1331503	A	T	.	SOX2_HMG_3	22	0	+	0	0	.
chr9	90641231	90641232	chr9:90641232:C:T	rs139024903	C	T	.	SOX2_HMG_3	-10	0	+	0	0	.
chr9	90699366	90699367	chr9:90699367:A:G	rs1173107	A	G	.	SOX2_HMG_3	-18	0	+	0	0	.
chr9	90739307	90739308	chr9:90739308:C:T	rs1582994	C	T	.	SOX2_HMG_3	16	1	-	3.038904589224353	2.7652169728340814	GAAAAATGCTATTGTGG
chr9	90744789	90744790	chr9:90744790:G:A	rs557070124	G	A	.	SOX2_HMG_3	32	0	-	0	0	.
chr9	90777596	90777597	chr9:90777597:A:G	rs291007	A	G	.	SOX2_HMG_3	-7	0	-	0	0	.
chr9	90802897	90802898	chr9:90802898:G:T	rs369511427	G	T	G	SOX2_HMG_3	-10	0	+	0	0	.
chr9	90840371	90840372	chr9:90840372:C:T	rs140369985	C	T	C	SOX2_HMG_3	26	0	+	0	0	.
chr9	90878549	90878550	chr9:90878550:G:A	rs12003597	G	A	G	SOX2_HMG_3	24	0	-	0	0	.
chr9	90878589	90878590	chr9:90878590:C:A	rs12005209	C	A	C	SOX2_HMG_3	-16	0	-	0	0	.
chr9	91043608	91043609	chr9:91043609:C:T	rs115327369	C	T	C	SOX2_HMG_3	-7	0	-	0	0	.
chr9	91045213	91045214	chr9:91045214:A:G	rs10115589	A	G	A	SOX2_HMG_3	4	1	+	1.7012773428088537	-5.207477436506368	GGTCAATGACATTCCTG
chr9	91045225	91045226	chr9:91045226:G:A	rs117094759	G	A	G	SOX2_HMG_3	16	1	+	1.7012773428088537	1.4275897264185824	GGTCAATGACATTCCTG
chr9	91156066	91156067	chr9:91156067:C:T	rs10991789	C	T	C	SOX2_HMG_3	30	0	+	0	0	.
chr9	91854815	91854816	chr9:91854816:T:A	rs7039406	T	A	T	SOX2_HMG_3	34	0	-	0	0	.
chr9	91947577	91947578	chr9:91947578:G:A	rs62565755	G	A	G	SOX2_HMG_3	-19	0	-	0	0	.
chr9	91992980	91992981	chr9:91992981:A:C	rs7872437	A	C	A	SOX2_HMG_3	20	0	-	0	0	.
chr9	92098614	92098615	chr9:92098615:G:C	rs17749165	G	C	-	SOX2_HMG_3	29	0	-	0	0	.
chr9	92637038	92637039	chr9:92637039:G:A	rs10820997	G	A	A	SOX2_HMG_3	13	1	+	3.612039758620816	-3.2967150206944043	GTTCATTTGTAGTGAGA
chr9	92811401	92811402	chr9:92811402:A:G	rs1853429	A	G	a	SOX2_HMG_3	6	1	-	5.794986573536233	-1.1137682057789877	ATACAATGGAATTGGTG
chr9	92878943	92878944	chr9:92878944:T:C	rs72741015	T	C	T	SOX2_HMG_3	4	1	-	4.28325489248023	-2.625499886834991	TGTCAATTTTATTAACA
chr9	93186878	93186879	chr9:93186879:G:A	rs7046200	G	A	G	SOX2_HMG_3	30	0	+	0	0	.
chr9	93277157	93277158	chr9:93277158:A:T	rs72743435	A	T	A	SOX2_HMG_3	-15	0	-	0	0	.
chr9	93718854	93718855	chr9:93718855:G:A	rs117037229	G	A	G	SOX2_HMG_3	-12	0	-	0	0	.
chr9	93803005	93803006	chr9:93803006:C:T	rs10821226	C	T	C	SOX2_HMG_3	32	0	-	0	0	.
chr9	93869240	93869241	chr9:93869241:A:G	rs11787920	A	G	A	SOX2_HMG_3	16	1	+	2.4793671525869883	2.7530547689772598	CACCAATGGCCTTGTTA
chr9	94553021	94553022	chr9:94553022:A:G	rs3802468	A	G	A	SOX2_HMG_3	-20	0	-	0	0	.
chr9	94747380	94747381	chr9:94747381:G:A	rs79654060	G	A	G	SOX2_HMG_3	-20	0	-	0	0	.
chr9	94883208	94883209	chr9:94883209:G:T	rs56319051	G	T	T	SOX2_HMG_3	3	1	-	3.4075251732545957	-3.5012296060606247	GTACAATTCCAGTGACT
chr9	95018690	95018691	chr9:95018691:A:G	rs62579892	A	G	A	SOX2_HMG_3	5	1	+	3.289200638272027	-3.6195541410431926	GAAGAATGCTAGTGTTG
chr9	95018709	95018710	chr9:95018710:G:C	rs3802455	G	C	G	SOX2_HMG_3	24	0	+	0	0	.
chr9	95110107	95110108	chr9:95110108:G:A	rs146857602	G	A	G	SOX2_HMG_3	-7	0	-	0	0	.
chr9	95215855	95215856	chr9:95215856:T:A	rs4647457	T	A	T	SOX2_HMG_3	-13	0	+	0	0	.
chr9	95478386	95478387	chr9:95478387:G:A	rs56319001	G	A	G	SOX2_HMG_3	-4	0	+	0	0	.
chr9	95626984	95626985	chr9:95626985:C:T	rs150649707	C	T	C	SOX2_HMG_3	-12	0	-	0	0	.
chr9	95874651	95874652	chr9:95874652:A:G	rs948809689	A	G	A	SOX2_HMG_3	17	0	-	0	0	.
chr9	96065168	96065169	chr9:96065169:C:T	rs4743505	C	T	T	SOX2_HMG_3	11	1	-	5.476714660298703	0.20110313128630491	ACTCATTGTTAGTGAAT
chr9	96777243	96777244	chr9:96777244:A:G	rs3780549	A	G	G	SOX2_HMG_3	21	0	-	0	0	.
chr9	96777255	96777256	chr9:96777256:A:G	rs77764105	A	G	A	SOX2_HMG_3	9	1	-	2.8206489416978795	2.013978807760833	GGACAATGATTGTGAAG
chr9	97345350	97345351	chr9:97345351:A:G	rs7034449	A	G	A	SOX2_HMG_3	-12	0	+	0	0	.
chr9	97345352	97345353	chr9:97345353:C:T	rs10435867	C	T	T	SOX2_HMG_3	-10	0	+	0	0	.
chr9	97388273	97388274	chr9:97388274:T:C	rs35778461	T	C	C	SOX2_HMG_3	18	0	+	0	0	.
chr9	97407735	97407736	chr9:97407736:G:A	rs55712525	G	A	G	SOX2_HMG_3	-3	0	-	0	0	.
chr9	97986681	97986682	chr9:97986682:A:T	rs76408563	A	T	A	SOX2_HMG_3	12	1	-	2.9630005127172	-3.9457542665980196	CATCAATTTCTGTGGTG
chr9	98118669	98118670	chr9:98118670:C:T	chr9:98118670:C:T	C	T	C	SOX2_HMG_3	9	1	+	4.3163766099929175	5.123046743929963	GCCCAATGGCAGTGTGG
chr9	98165264	98165265	chr9:98165265:T:C	rs7032570	T	C	T	SOX2_HMG_3	0	1	+	7.179338949206679	7.316667927255343	TAACAATTCTATTGTAA
chr9	98273338	98273339	chr9:98273339:C:A	rs62574300	C	A	C	SOX2_HMG_3	3	1	+	3.632667235946961	-3.2760875433682584	AACCAATGACCTTGAAA
chr9	98506237	98506238	chr9:98506238:T:C	rs871797	T	C	C	SOX2_HMG_3	-6	0	-	0	0	.
chr9	98568138	98568139	chr9:98568139:G:C	rs13288889	G	C	G	SOX2_HMG_3	-12	0	+	0	0	.
chr9	98804487	98804488	chr9:98804488:A:T	rs7039118	A	T	T	SOX2_HMG_3	-4	0	-	0	0	.
chr9	98857431	98857432	chr9:98857432:T:C	rs151322614	T	C	T	SOX2_HMG_3	25	0	-	0	0	.
chr9	98886755	98886756	chr9:98886756:C:T	rs117757615	C	T	C	SOX2_HMG_3	20	0	-	0	0	.
chr9	98886792	98886793	chr9:98886793:G:A	rs145762742	G	A	G	SOX2_HMG_3	-17	0	-	0	0	.
chr9	98909526	98909527	chr9:98909527:G:T	rs142992897	G	T	G	SOX2_HMG_3	-2	0	+	0	0	.
chr9	98920289	98920290	chr9:98920290:T:G	rs13288865	T	G	T	SOX2_HMG_3	14	1	-	6.075251605233783	-0.75704710033291	TATCAATGCAATTTAGT
chr9	99346134	99346135	chr9:99346135:G:A	rs147138188	G	A	G	SOX2_HMG_3	23	0	-	0	0	.
chr9	99359506	99359507	chr9:99359507:A:G	chr9:99359507:A:G	A	G	A	SOX2_HMG_3	-15	0	+	0	0	.
chr9	99359556	99359557	chr9:99359557:G:A	rs77682886	G	A	G	SOX2_HMG_3	35	0	+	0	0	.
chr9	99378443	99378444	chr9:99378444:C:T	rs13297598	C	T	C	SOX2_HMG_3	7	1	-	6.5237820557497725	3.794994935188439	GTTCAATGTCAATGAAT
chr9	99472074	99472075	chr9:99472075:A:G	rs602522	A	G	A	SOX2_HMG_3	-4	0	+	0	0	.
chr9	99588537	99588538	chr9:99588538:T:A	rs4743360	T	A	A	SOX2_HMG_3	12	1	+	2.5990345847783822	-4.309720194536837	CCTCAATGCCAGTTTTG
chr9	99690289	99690290	chr9:99690290:T:C	rs72744672	T	C	T	SOX2_HMG_3	-10	0	-	0	0	.
chr9	99711159	99711160	chr9:99711160:C:A	rs1147312	C	A	C	SOX2_HMG_3	-12	0	-	0	0	.
chr9	99869952	99869953	chr9:99869953:T:C	rs2416878	T	C	T	SOX2_HMG_3	10	1	-	8.579667756657038	1.6709129773418157	AATAAATGTTAGTGAGA
chr9	99878808	99878809	chr9:99878809:T:A	rs112933989	T	A	T	SOX2_HMG_3	17	0	-	0	0	.
chr9	99922760	99922761	chr9:99922761:G:A	rs10121880	G	A	A	SOX2_HMG_3	21	0	+	0	0	.
chr9	100013808	100013809	chr9:100013809:A:T	rs10988945	A	T	A	SOX2_HMG_3	36	0	+	0	0	.
chr9	100282016	100282017	chr9:100282017:G:T	rs7866700	G	T	G	SOX2_HMG_3	15	1	+	4.105013227705983	5.772389245973606	CCTTAATGGCAGTGAGA
chr9	100284888	100284889	chr9:100284889:T:C	rs2065997	T	C	C	SOX2_HMG_3	0	1	-	5.025664521156626	5.24625880024192	AGTGAATGGAAGTGAGG
chr9	100395232	100395233	chr9:100395233:C:A	rs12000794	C	A	C	SOX2_HMG_3	9	1	+	7.10614687746941	6.054241669459726	AATCACTGGCAGTGAGT
chr9	101167496	101167497	chr9:101167497:A:G	rs4278208	A	G	A	SOX2_HMG_3	21	0	-	0	0	.
chr9	101689357	101689358	chr9:101689358:G:A	rs2485536	G	A	g	SOX2_HMG_3	-10	0	-	0	0	.
chr9	102010588	102010589	chr9:102010589:C:G	rs11562348	C	G	C	SOX2_HMG_3	-11	0	-	0	0	.
chr9	102729007	102729008	chr9:102729008:A:G	rs10820257	A	G	G	SOX2_HMG_3	-19	0	+	0	0	.
chr9	102729014	102729015	chr9:102729015:T:G	rs10118172	T	G	G	SOX2_HMG_3	-12	0	+	0	0	.
chr9	102981792	102981793	chr9:102981793:A:G	rs6479146	A	G	G	SOX2_HMG_3	5	1	+	4.00150529944634	-2.9072494798688813	TTTGAATTTCAGTGATG
chr9	103294203	103294204	chr9:103294204:G:A	rs115755985	G	A	G	SOX2_HMG_3	26	0	-	0	0	.
chr9	103294243	103294244	chr9:103294244:C:T	rs79523244	C	T	C	SOX2_HMG_3	-14	0	-	0	0	.
chr9	103707364	103707365	chr9:103707365:A:G	rs113313647	A	G	A	SOX2_HMG_3	23	0	+	0	0	.
chr9	103838097	103838098	chr9:103838098:T:C	rs73662948	T	C	T	SOX2_HMG_3	25	0	-	0	0	.
chr9	104014448	104014449	chr9:104014449:T:C	rs7466900	T	C	T	SOX2_HMG_3	36	0	-	0	0	.
chr9	104088723	104088724	chr9:104088724:A:G	rs75628585	A	G	a	SOX2_HMG_3	-10	0	-	0	0	.
chr9	104091222	104091223	chr9:104091223:G:A	rs1999153	G	A	A	SOX2_HMG_3	29	0	+	0	0	.
chr9	104092263	104092264	chr9:104092264:G:A	rs10512326	G	A	G	SOX2_HMG_3	23	0	+	0	0	.
chr9	104231056	104231057	chr9:104231057:A:G	rs1857983	A	G	A	SOX2_HMG_3	19	0	+	0	0	.
chr9	104557076	104557077	chr9:104557077:G:T	rs62569012	G	T	G	SOX2_HMG_3	25	0	+	0	0	.
chr9	104682593	104682594	chr9:104682594:T:C	rs35213464	T	C	T	SOX2_HMG_3	-19	0	+	0	0	.
chr9	104861468	104861469	chr9:104861469:T:G	rs2487059	T	G	T	SOX2_HMG_3	22	0	+	0	0	.
chr9	104863650	104863651	chr9:104863651:A:G	rs4149285	A	G	A	SOX2_HMG_3	-6	0	-	0	0	.
chr9	104882269	104882270	chr9:104882270:C:T	rs79252500	C	T	C	SOX2_HMG_3	-12	0	-	0	0	.
chr9	104900022	104900023	chr9:104900023:G:C	rs73664373	G	C	G	SOX2_HMG_3	-19	0	-	0	0	.
chr9	104900023	104900024	chr9:104900024:C:G	rs73664374	C	G	C	SOX2_HMG_3	-20	0	-	0	0	.
chr9	104931263	104931264	chr9:104931264:G:A	rs7866586	G	A	G	SOX2_HMG_3	-9	0	-	0	0	.
chr9	104933071	104933072	chr9:104933072:G:A	rs2472496	G	A	A	SOX2_HMG_3	-19	0	+	0	0	.
chr9	105102875	105102876	chr9:105102876:A:G	rs7029430	A	G	G	SOX2_HMG_3	34	0	+	0	0	.
chr9	105183199	105183200	chr9:105183200:G:A	rs58525889	G	A	G	SOX2_HMG_3	29	0	+	0	0	.
chr9	105187892	105187893	chr9:105187893:A:G	rs7866760	A	G	G	SOX2_HMG_3	12	1	+	4.756412519245474	4.756412519245474	TAGCAATGTTAGAGAAG
chr9	105259338	105259339	chr9:105259339:C:T	rs116225209	C	T	C	SOX2_HMG_3	-6	0	+	0	0	.
chr9	105483802	105483803	chr9:105483803:C:G	rs2812311	C	G	C	SOX2_HMG_3	-11	0	+	0	0	.
chr9	105652163	105652164	chr9:105652164:G:A	rs551015	G	A	G	SOX2_HMG_3	29	0	+	0	0	.
chr9	105757746	105757747	chr9:105757747:C:T	rs7026968	C	T	T	SOX2_HMG_3	-17	0	+	0	0	.
chr9	106456345	106456346	chr9:106456346:C:T	rs2900412	C	T	C	SOX2_HMG_3	-4	0	+	0	0	.
chr9	106480113	106480114	chr9:106480114:A:C	rs117220866	A	C	A	SOX2_HMG_3	26	0	+	0	0	.
chr9	106602784	106602785	chr9:106602785:G:A	rs6477534	G	A	A	SOX2_HMG_3	29	0	-	0	0	.
chr9	106643655	106643656	chr9:106643656:G:C	rs57849724	G	C	G	SOX2_HMG_3	-3	0	-	0	0	.
chr9	107046977	107046978	chr9:107046978:G:A	rs6477555	G	A	A	SOX2_HMG_3	3	1	-	8.289548298655621	1.3807935193404	TATCAATGTTGTTGTTA
chr9	107162444	107162445	chr9:107162445:A:G	rs7035605	A	G	A	SOX2_HMG_3	-12	0	-	0	0	.
chr9	107176814	107176815	chr9:107176815:C:T	rs12340562	C	T	T	SOX2_HMG_3	-20	0	-	0	0	.
chr9	107246457	107246458	chr9:107246458:G:A	rs36116755	G	A	G	SOX2_HMG_3	7	1	+	4.286396520429239	1.5576093998679048	ATACAATGGAATTGGAA
chr9	107392717	107392718	chr9:107392718:C:A	rs145477526	C	A	C	SOX2_HMG_3	8	1	-	2.415632550603094	2.5531004704677565	AATCAATAGCCTTGGGG
chr9	107466442	107466443	chr9:107466443:G:A	rs67249072	G	A	G	SOX2_HMG_3	31	0	-	0	0	.
chr9	107645670	107645671	chr9:107645671:G:C	rs940291	G	C	G	SOX2_HMG_3	31	0	+	0	0	.
chr9	107657344	107657345	chr9:107657345:A:T	rs10978974	A	T	A	SOX2_HMG_3	34	0	+	0	0	.
chr9	107708350	107708351	chr9:107708351:G:A	rs10979021	G	A	G	SOX2_HMG_3	-2	0	+	0	0	.
chr9	107814668	107814669	chr9:107814669:C:G	rs77621408	C	G	C	SOX2_HMG_3	-20	0	+	0	0	.
chr9	107933109	107933110	chr9:107933110:A:G	rs74941932	A	G	A	SOX2_HMG_3	5	1	+	4.863976997782386	-2.044777781532836	AATCAATGGCAGTTTTC
chr9	107953422	107953423	chr9:107953423:C:T	rs10979128	C	T	C	SOX2_HMG_3	7	1	-	3.1632899461047446	0.4345028255434096	AGTCAACGTAAGTGAGC
chr9	108163222	108163223	chr9:108163223:T:C	rs141472653	T	C	T	SOX2_HMG_3	-8	0	+	0	0	.
chr9	108218313	108218314	chr9:108218314:A:G	rs4246873	A	G	G	SOX2_HMG_3	1	1	+	3.535448914973726	1.7038013248944353	TAGCAATTGTAGTAATA
chr9	108239891	108239892	chr9:108239892:C:T	rs7847854	C	T	T	SOX2_HMG_3	25	0	-	0	0	.
chr9	109109583	109109584	chr9:109109584:T:C	rs7870597	T	C	T	SOX2_HMG_3	-2	0	-	0	0	.
chr9	109327651	109327652	chr9:109327652:T:A	rs139698166	T	A	T	SOX2_HMG_3	12	1	+	3.960401912432553	-2.9483528668826673	GAGCCATGCCAGTGAAG
chr9	109424051	109424052	chr9:109424052:A:T	rs10816809	A	T	A	SOX2_HMG_3	14	1	-	4.671970851805277	7.3847446966195704	CATCACTGGCAGTGTGG
chr9	109470322	109470323	chr9:109470323:T:G	rs7020624	T	G	T	SOX2_HMG_3	33	0	-	0	0	.
chr9	109535898	109535899	chr9:109535899:A:C	rs7870491	A	C	A	SOX2_HMG_3	-10	0	-	0	0	.
chr9	109574485	109574486	chr9:109574486:A:G	chr9:109574486:A:G	A	G	A	SOX2_HMG_3	33	0	-	0	0	.
chr9	109574513	109574514	chr9:109574514:T:C	rs145866260	T	C	T	SOX2_HMG_3	5	1	-	6.0764750355341555	-0.8322797437810656	TAGCAATAGAATTGTTT
chr9	109604354	109604355	chr9:109604355:G:A	rs4978839	G	A	G	SOX2_HMG_3	18	0	+	0	0	.
chr9	109774148	109774149	chr9:109774149:G:A	rs7022209	G	A	A	SOX2_HMG_3	25	0	+	0	0	.
chr9	109880400	109880401	chr9:109880401:G:A	rs560815584	G	A	G	SOX2_HMG_3	-8	0	+	0	0	.
chr9	109972164	109972165	chr9:109972165:T:C	rs4978864	T	C	C	SOX2_HMG_3	-16	0	-	0	0	.
chr9	110099579	110099580	chr9:110099580:C:G	rs116889253	C	G	C	SOX2_HMG_3	36	0	-	0	0	.
chr9	110153433	110153434	chr9:110153434:G:A	rs6477743	G	A	A	SOX2_HMG_3	36	0	-	0	0	.
chr9	110183231	110183232	chr9:110183232:C:T	rs10816935	C	T	C	SOX2_HMG_3	15	1	+	6.092627467406415	8.935336623583273	AATCAAAATTATTGACA
chr9	110191708	110191709	chr9:110191709:C:T	rs76360042	C	T	C	SOX2_HMG_3	7	1	-	3.8308084645499396	1.1020213439886049	GAGCACTGGCATTGTTT
chr9	110217742	110217743	chr9:110217743:A:G	rs79039078	A	G	a	SOX2_HMG_3	33	0	-	0	0	.
chr9	110254604	110254605	chr9:110254605:T:C	rs4135168	T	C	T	SOX2_HMG_3	35	0	+	0	0	.
chr9	110486388	110486389	chr9:110486389:C:G	rs10817031	C	G	G	SOX2_HMG_3	-9	0	+	0	0	.
chr9	110537925	110537926	chr9:110537926:C:T	rs10759440	C	T	C	SOX2_HMG_3	-2	0	+	0	0	.
chr9	111153248	111153249	chr9:111153249:T:C	rs10980799	T	C	T	SOX2_HMG_3	-13	0	+	0	0	.
chr9	111161442	111161443	chr9:111161443:A:G	rs12350763	A	G	A	SOX2_HMG_3	-9	0	+	0	0	.
chr9	111353728	111353729	chr9:111353729:T:C	rs35381875	T	C	T	SOX2_HMG_3	10	1	-	3.8717574650695235	-3.036997314245696	GATCAACAAAATTGTTG
chr9	111475319	111475320	chr9:111475320:C:T	rs12238412	C	T	C	SOX2_HMG_3	5	1	+	2.283793183967427	2.283793183967427	GAACACTGGCAGTGACT
chr9	111622774	111622775	chr9:111622775:G:A	rs10759503	G	A	g	SOX2_HMG_3	-5	0	+	0	0	.
chr9	111731541	111731542	chr9:111731542:T:A	rs12352855	T	A	T	SOX2_HMG_3	18	0	-	0	0	.
chr9	111825618	111825619	chr9:111825619:G:A	rs73656298	G	A	G	SOX2_HMG_3	29	0	+	0	0	.
chr9	111892588	111892589	chr9:111892589:C:T	rs7854511	C	T	T	SOX2_HMG_3	11	1	-	4.971387571663009	-0.3042239573493888	AATCAATTGACGTGAAA
chr9	111898023	111898024	chr9:111898024:G:T	rs139622009	G	T	G	SOX2_HMG_3	-2	0	-	0	0	.
chr9	111995065	111995066	chr9:111995066:A:C	rs2805484	A	C	C	SOX2_HMG_3	-4	0	+	0	0	.
chr9	112028869	112028870	chr9:112028870:G:A	rs1324210	G	A	A	SOX2_HMG_3	-20	0	+	0	0	.
chr9	112047821	112047822	chr9:112047822:A:G	rs10981228	A	G	A	SOX2_HMG_3	-9	0	-	0	0	.
chr9	112064903	112064904	chr9:112064904:G:A	rs10817259	G	A	G	SOX2_HMG_3	34	0	-	0	0	.
chr9	112097911	112097912	chr9:112097912:A:C	rs12350562	A	C	A	SOX2_HMG_3	27	0	+	0	0	.
chr9	112194266	112194267	chr9:112194267:A:G	rs10125519	A	G	A	SOX2_HMG_3	-17	0	-	0	0	.
chr9	112437544	112437545	chr9:112437545:G:A	rs7866567	G	A	G	SOX2_HMG_3	17	0	+	0	0	.
chr9	112489303	112489304	chr9:112489304:T:G	rs7870207	T	G	T	SOX2_HMG_3	6	1	+	7.616126664306012	0.7073718849907908	TGTCAGTGGTAGTGATA
chr9	112760410	112760411	chr9:112760411:T:A	rs2796030	T	A	A	SOX2_HMG_3	4	1	-	4.042544713991369	-2.8662100653238523	AATAAAAGATATTGATG
chr9	112764249	112764250	chr9:112764250:C:T	rs10817380	C	T	C	SOX2_HMG_3	-8	0	+	0	0	.
chr9	113153974	113153975	chr9:113153975:A:G	rs7856379	A	G	G	SOX2_HMG_3	10	1	+	6.218993663197271	-0.6897611161179504	ACTCACTGTTATTGTTG
chr9	113340886	113340887	chr9:113340887:T:C	rs12235345	T	C	T	SOX2_HMG_3	-10	0	+	0	0	.
chr9	113340899	113340900	chr9:113340900:C:G	rs12350131	C	G	G	SOX2_HMG_3	3	1	+	7.576750842596679	0.6679960632814577	AATCAATGGCAGGGATC
chr9	113357018	113357019	chr9:113357019:T:C	rs7859965	T	C	T	SOX2_HMG_3	12	1	+	6.901164666327195	-0.00759011298802581	TATAAATAGTATTGAAA
chr9	113361636	113361637	chr9:113361637:A:G	rs7037201	A	G	G	SOX2_HMG_3	-9	0	+	0	0	.
chr9	113512198	113512199	chr9:113512199:G:A	rs114133679	G	A	G	SOX2_HMG_3	-12	0	+	0	0	.
chr9	113525983	113525984	chr9:113525984:T:C	rs7852118	T	C	C	SOX2_HMG_3	2	1	+	2.5697798661539126	-2.433592204161675	GCTGAATGGCAGTGTAA
chr9	113536619	113536620	chr9:113536620:C:T	rs7032311	C	T	C	SOX2_HMG_3	-12	0	+	0	0	.
chr9	113536636	113536637	chr9:113536637:A:G	rs112189420	A	G	A	SOX2_HMG_3	5	1	+	1.9674343969626205	-4.9413203823526	CCTCAATGTCACTGGGG
chr9	113615263	113615264	chr9:113615264:T:C	rs79222753	T	C	T	SOX2_HMG_3	6	1	+	5.547074897236833	-1.3616798820783893	GATCAATGCCTGTGTTT
chr9	113682374	113682375	chr9:113682375:C:T	rs79464171	C	T	C	SOX2_HMG_3	11	1	-	7.388344388780425	2.1127328597680273	CATCAGTGGTAGTGAGT
chr9	113893119	113893120	chr9:113893120:G:A	rs75293905	G	A	G	SOX2_HMG_3	-10	0	+	0	0	.
chr9	114143337	114143338	chr9:114143338:C:T	rs4979342	C	T	C	SOX2_HMG_3	34	0	+	0	0	.
chr9	114225988	114225989	chr9:114225989:C:T	rs7028958	C	T	C	SOX2_HMG_3	17	0	+	0	0	.
chr9	114278178	114278179	chr9:114278179:G:A	rs112446757	G	A	G	SOX2_HMG_3	-7	0	+	0	0	.
chr9	114326058	114326059	chr9:114326059:C:T	rs372253280	C	T	C	SOX2_HMG_3	8	1	+	6.207606872886541	7.079343225522404	AGTAAATGCCAGTGATT
chr9	114482805	114482806	chr9:114482806:A:C	rs10982239	A	C	A	SOX2_HMG_3	-8	0	+	0	0	.
chr9	114512713	114512714	chr9:114512714:C:T	rs1408525	C	T	C	SOX2_HMG_3	-7	0	+	0	0	.
chr9	114512731	114512732	chr9:114512732:G:A	rs998547	G	A	G	SOX2_HMG_3	11	1	+	2.0212678416055274	-3.2543436874068714	AATCAATGGCAGAGTCC
chr9	114606493	114606494	chr9:114606494:C:T	rs79107791	C	T	C	SOX2_HMG_3	26	0	+	0	0	.
chr9	114608257	114608258	chr9:114608258:T:C	rs4978600	T	C	C	SOX2_HMG_3	19	0	-	0	0	.
chr9	114908383	114908384	chr9:114908384:A:T	rs12337739	A	T	T	SOX2_HMG_3	6	1	-	2.230007122270843	-4.678747657044378	CTGCAATGCCAGTGGGA
chr9	115024854	115024855	chr9:115024855:A:T	rs115276378	A	T	A	SOX2_HMG_3	12	1	-	6.640201833968055	-0.2685529453471658	AAGCAATGGTACTGAAA
chr9	115165008	115165009	chr9:115165009:A:G	rs76128178	A	G	A	SOX2_HMG_3	25	0	-	0	0	.
chr9	115209875	115209876	chr9:115209876:C:T	rs1335357	C	T	T	SOX2_HMG_3	28	0	+	0	0	.
chr9	115362909	115362910	chr9:115362910:C:T	rs148054871	C	T	c	SOX2_HMG_3	-8	0	-	0	0	.
chr9	115394373	115394374	chr9:115394374:G:C	chr9:115394374:G:C	G	C	G	SOX2_HMG_3	-13	0	-	0	0	.
chr9	115525548	115525549	chr9:115525549:C:T	rs145428565	C	T	C	SOX2_HMG_3	34	0	+	0	0	.
chr9	115553361	115553362	chr9:115553362:C:T	rs12005078	C	T	T	SOX2_HMG_3	-4	0	+	0	0	.
chr9	115591817	115591818	chr9:115591818:A:G	rs1024028577	A	G	A	SOX2_HMG_3	22	0	-	0	0	.
chr9	115591835	115591836	chr9:115591836:T:C	rs73528142	T	C	T	SOX2_HMG_3	4	1	-	8.426065483356185	1.517310704040964	GATCAAAGTCAGTGAAA
chr9	115596633	115596634	chr9:115596634:G:A	rs7467290	G	A	G	SOX2_HMG_3	33	0	+	0	0	.
chr9	115924255	115924256	chr9:115924256:C:T	rs13297992	C	T	C	SOX2_HMG_3	31	0	+	0	0	.
chr9	116181959	116181960	chr9:116181960:C:T	rs1160248	C	T	C	SOX2_HMG_3	-16	0	-	0	0	.
chr9	116404940	116404941	chr9:116404941:C:T	rs1858015	C	T	T	SOX2_HMG_3	19	0	+	0	0	.
chr9	116423379	116423380	chr9:116423380:A:T	rs147256480	A	T	A	SOX2_HMG_3	-7	0	+	0	0	.
chr9	116491843	116491844	chr9:116491844:G:C	rs11794318	G	C	G	SOX2_HMG_3	-16	0	-	0	0	.
chr9	116505196	116505197	chr9:116505197:G:A	rs115794384	G	A	G	SOX2_HMG_3	-10	0	-	0	0	.
chr9	116525671	116525672	chr9:116525672:T:C	rs56123339	T	C	T	SOX2_HMG_3	10	1	-	2.334351310112722	-4.5744034692024975	TGCCACTGCTATTGAAG
chr9	116697563	116697564	chr9:116697564:G:A	rs73515229	G	A	G	SOX2_HMG_3	-15	0	-	0	0	.
chr9	116952150	116952151	chr9:116952151:G:A	rs11789879	G	A	G	SOX2_HMG_3	15	1	+	2.313931072296892	2.746404653847793	TCTTAATGCTAGTGAGC
chr9	117027943	117027944	chr9:117027944:G:A	rs13295186	G	A	g	SOX2_HMG_3	-10	0	-	0	0	.
chr9	117095180	117095181	chr9:117095181:C:A	rs11791192	C	A	C	SOX2_HMG_3	7	1	-	5.562593435828435	3.5178829310948982	ATTCCATGCCAGTGATA
chr9	117349020	117349021	chr9:117349021:T:C	rs7874694	T	C	C	SOX2_HMG_3	-20	0	-	0	0	.
chr9	117648927	117648928	chr9:117648928:T:C	rs10126004	T	C	C	SOX2_HMG_3	26	0	-	0	0	.
chr9	117648963	117648964	chr9:117648964:A:G	rs115116910	A	G	A	SOX2_HMG_3	-10	0	-	0	0	.
chr9	118182537	118182538	chr9:118182538:A:C	rs13296369	A	C	A	SOX2_HMG_3	17	0	-	0	0	.
chr9	118287950	118287951	chr9:118287951:C:T	rs10759963	C	T	C	SOX2_HMG_3	36	0	-	0	0	.
chr9	118367098	118367099	chr9:118367099:T:G	rs62572468	T	G	T	SOX2_HMG_3	-16	0	-	0	0	.
chr9	118529465	118529466	chr9:118529466:G:A	rs7037164	G	A	A	SOX2_HMG_3	-2	0	-	0	0	.
chr9	119037224	119037225	chr9:119037225:A:G	rs10818269	A	G	A	SOX2_HMG_3	-9	0	+	0	0	.
chr9	119651266	119651267	chr9:119651267:T:C	rs10818353	T	C	C	SOX2_HMG_3	11	1	+	6.479039401102863	-0.21365209712948485	ATTCAATGGCATGGAAA
chr9	120243292	120243293	chr9:120243293:T:A	rs10984879	T	A	t	SOX2_HMG_3	28	0	+	0	0	.
chr9	120384947	120384948	chr9:120384948:A:G	rs4836818	A	G	A	SOX2_HMG_3	22	0	+	0	0	.
chr9	120394482	120394483	chr9:120394483:G:C	rs4410972	G	C	G	SOX2_HMG_3	35	0	-	0	0	.
chr9	120440776	120440777	chr9:120440777:C:G	rs3739825	C	G	C	SOX2_HMG_3	3	1	+	2.3568398351905415	-4.551914944124678	AGTCAGTGCCAGTGTGA
chr9	120650531	120650532	chr9:120650532:A:T	rs144177743	A	T	A	SOX2_HMG_3	11	1	-	2.3009003661469793	-4.391791132085368	GAGCAATGTCTTTGTGT
chr9	120704049	120704050	chr9:120704050:G:C	rs7044226	G	C	C	SOX2_HMG_3	13	1	+	3.5577332984141963	-3.351021480901024	AAGAAATGAAATTGAGG
chr9	120891710	120891711	chr9:120891711:A:G	rs540811297	A	G	A	SOX2_HMG_3	12	1	-	4.850909117590819	-2.057845661724401	GCTCAATGCTACTGACT
chr9	120946385	120946386	chr9:120946386:T:A	rs10818489	T	A	T	SOX2_HMG_3	34	0	-	0	0	.
chr9	121273101	121273102	chr9:121273102:T:C	rs10739594	T	C	C	SOX2_HMG_3	4	1	-	5.564015546174787	-1.3447392331404346	AGTCAATTTCAGGGATA
chr9	121351334	121351335	chr9:121351335:G:A	rs116457860	G	A	G	SOX2_HMG_3	36	0	-	0	0	.
chr9	121351337	121351338	chr9:121351338:G:A	rs115858465	G	A	G	SOX2_HMG_3	33	0	-	0	0	.
chr9	121525510	121525511	chr9:121525511:T:C	rs7849996	T	C	T	SOX2_HMG_3	5	1	-	2.3220059608720813	-4.586748818443141	CATCAATGTGGGTGAAG
chr9	121915086	121915087	chr9:121915087:A:G	rs1018997565	A	G	A	SOX2_HMG_3	-6	0	+	0	0	.
chr9	122109860	122109861	chr9:122109861:T:C	rs944215	T	C	T	SOX2_HMG_3	20	0	-	0	0	.
chr9	122159339	122159340	chr9:122159340:G:A	rs1053786840	G	A	G	SOX2_HMG_3	29	0	-	0	0	.
chr9	122344118	122344119	chr9:122344119:G:A	rs1484263638	G	A	G	SOX2_HMG_3	22	0	-	0	0	.
chr9	122344160	122344161	chr9:122344161:C:T	rs34666547	C	T	C	SOX2_HMG_3	-20	0	-	0	0	.
chr9	122567904	122567905	chr9:122567905:A:C	rs10985702	A	C	A	SOX2_HMG_3	-9	0	-	0	0	.
chr9	123157314	123157315	chr9:123157315:G:A	rs62578996	G	A	G	SOX2_HMG_3	19	0	+	0	0	.
chr9	123523830	123523831	chr9:123523831:G:C	rs72757115	G	C	G	SOX2_HMG_3	-1	0	+	0	0	.
chr9	123757788	123757789	chr9:123757789:T:C	rs9785285	T	C	C	SOX2_HMG_3	22	0	+	0	0	.
chr9	123796257	123796258	chr9:123796258:T:C	rs1752164	T	C	C	SOX2_HMG_3	16	1	-	3.871440090600295	4.145127706990566	CTTCAGTGAAAGTGATA
chr9	124259353	124259354	chr9:124259354:C:T	rs577664074	C	T	C	SOX2_HMG_3	-16	0	+	0	0	.
chr9	124259402	124259403	chr9:124259403:T:A	rs560174925	T	A	T	SOX2_HMG_3	33	0	+	0	0	.
chr9	126001633	126001634	chr9:126001634:T:C	rs139310645	T	C	T	SOX2_HMG_3	-11	0	-	0	0	.
chr9	126081849	126081850	chr9:126081850:C:T	rs76378088	C	T	C	SOX2_HMG_3	29	0	-	0	0	.
chr9	126081886	126081887	chr9:126081887:A:G	rs2416996	A	G	A	SOX2_HMG_3	-8	0	-	0	0	.
chr9	126307221	126307222	chr9:126307222:G:A	rs741027	G	A	A	SOX2_HMG_3	-10	0	+	0	0	.
chr9	126307249	126307250	chr9:126307250:C:T	rs74604600	C	T	C	SOX2_HMG_3	18	0	+	0	0	.
chr9	126320655	126320656	chr9:126320656:C:T	rs12552388	C	T	C	SOX2_HMG_3	-12	0	-	0	0	.
chr9	126339109	126339110	chr9:126339110:C:G	rs531599	C	G	C	SOX2_HMG_3	-10	0	+	0	0	.
chr9	126570812	126570813	chr9:126570813:T:A	rs182559180	T	A	T	SOX2_HMG_3	14	1	-	2.6678385581980013	-0.04493528661629265	AATGAATGGCAGGGATG
chr9	126607119	126607120	chr9:126607120:A:C	rs62578123	A	C	A	SOX2_HMG_3	-17	0	-	0	0	.
chr9	126701333	126701334	chr9:126701334:C:T	rs3906146	C	T	T	SOX2_HMG_3	-18	0	-	0	0	.
chr9	126789186	126789187	chr9:126789187:A:G	rs2417038	A	G	G	SOX2_HMG_3	4	1	+	3.620516341791929	-3.2882384375232916	CACCAATGGTAGTAAAG
chr9	126804874	126804875	chr9:126804875:G:C	rs73668416	G	C	C	SOX2_HMG_3	-10	0	-	0	0	.
chr9	126886842	126886843	chr9:126886843:C:T	rs79333740	C	T	T	SOX2_HMG_3	-20	0	-	0	0	.
chr9	126999851	126999852	chr9:126999852:A:T	rs10760471	A	T	T	SOX2_HMG_3	16	1	+	4.06476264492121	3.5353798195352915	TACCAATGAGAGTGATA
chr9	127050532	127050533	chr9:127050533:A:G	rs12551501	A	G	A	SOX2_HMG_3	19	0	+	0	0	.
chr9	127473617	127473618	chr9:127473618:G:A	rs10819296	G	A	G	SOX2_HMG_3	-3	0	-	0	0	.
chr9	127556196	127556197	chr9:127556197:C:T	rs76295919	C	T	C	SOX2_HMG_3	24	0	+	0	0	.
chr9	127579617	127579618	chr9:127579618:A:C	rs74663557	A	C	A	SOX2_HMG_3	-19	0	+	0	0	.
chr9	127579627	127579628	chr9:127579628:C:T	rs1333437040	C	T	C	SOX2_HMG_3	-9	0	+	0	0	.
chr9	127769984	127769985	chr9:127769985:T:C	rs117929733	T	C	T	SOX2_HMG_3	12	1	+	2.9651552908097636	-3.943599488505457	TGACAATTCCAGTGTGG
chr9	128067549	128067550	chr9:128067550:G:A	chr9:128067550:G:A	G	A	G	SOX2_HMG_3	31	0	-	0	0	.
chr9	128102022	128102023	chr9:128102023:G:A	rs118142698	G	A	G	SOX2_HMG_3	-2	0	-	0	0	.
chr9	128697518	128697519	chr9:128697519:C:G	rs7046249	C	G	C	SOX2_HMG_3	-19	0	-	0	0	.
chr9	128883141	128883142	chr9:128883142:T:G	chr9:128883142:T:G	T	G	T	SOX2_HMG_3	35	0	-	0	0	.
chr9	129028861	129028862	chr9:129028862:C:G	rs80304163	C	G	C	SOX2_HMG_3	32	0	+	0	0	.
chr9	129028865	129028866	chr9:129028866:T:A	rs7041665	T	A	T	SOX2_HMG_3	36	0	+	0	0	.
chr9	129427202	129427203	chr9:129427203:G:T	rs79385872	G	T	g	SOX2_HMG_3	-14	0	-	0	0	.
chr9	129438496	129438497	chr9:129438497:C:A	rs72766043	C	A	C	SOX2_HMG_3	29	0	+	0	0	.
chr9	129703527	129703528	chr9:129703528:T:G	rs4836668	T	G	G	SOX2_HMG_3	15	1	+	5.341622382907125	3.674246364639502	GATCACTGGCAGTGGTA
chr9	129746336	129746337	chr9:129746337:A:G	rs55817850	A	G	A	SOX2_HMG_3	-18	0	+	0	0	.
chr9	129892320	129892321	chr9:129892321:A:G	rs1226029141	A	G	A	SOX2_HMG_3	-12	0	-	0	0	.
chr9	129910601	129910602	chr9:129910602:G:C	rs997218491	G	C	G	SOX2_HMG_3	26	0	+	0	0	.
chr9	129939491	129939492	chr9:129939492:A:G	rs80304535	A	G	A	SOX2_HMG_3	5	1	+	4.2774410713512925	-2.6313137079639284	CCTCAATGTTAGTTTTG
chr9	129944884	129944885	chr9:129944885:T:C	rs7870884	T	C	T	SOX2_HMG_3	5	1	-	3.828401192395718	-3.0803535869195016	TTTCAATGATAGTAAAT
chr9	130116563	130116564	chr9:130116564:C:T	rs72759136	C	T	C	SOX2_HMG_3	7	1	-	3.254240714491381	0.5254535939300461	GAGCTATGCCAGTGAGA
chr9	130276441	130276442	chr9:130276442:A:G	rs9657643	A	G	a	SOX2_HMG_3	-8	0	+	0	0	.
chr9	130282174	130282175	chr9:130282175:C:T	rs118004427	C	T	C	SOX2_HMG_3	-19	0	-	0	0	.
chr9	130483268	130483269	chr9:130483269:G:T	rs10901080	G	T	G	SOX2_HMG_3	-17	0	+	0	0	.
chr9	130738689	130738690	chr9:130738690:T:C	rs2583844	T	C	T	SOX2_HMG_3	1	1	-	5.413460944893809	3.5818133548145186	CAGCAAGGTAATTGATA
chr9	131132024	131132025	chr9:131132025:G:A	rs149140465	G	A	G	SOX2_HMG_3	11	1	+	2.099935642575061	-3.1756758864373373	CATCAGTGCTAGTGGCG
chr9	131256816	131256817	chr9:131256817:C:T	rs1213752525	C	T	c	SOX2_HMG_3	34	0	+	0	0	.
chr9	131518374	131518375	chr9:131518375:C:T	rs113628769	C	T	C	SOX2_HMG_3	-6	0	-	0	0	.
chr9	131708350	131708351	chr9:131708351:C:T	rs143771295	C	T	C	SOX2_HMG_3	-10	0	+	0	0	.
chr9	131759178	131759179	chr9:131759179:A:C	rs2987410	A	C	C	SOX2_HMG_3	-11	0	-	0	0	.
chr9	131916532	131916533	chr9:131916533:G:C	rs12555726	G	C	G	SOX2_HMG_3	31	0	-	0	0	.
chr9	132079836	132079837	chr9:132079837:T:C	chr9:132079837:T:C	T	C	T	SOX2_HMG_3	-4	0	-	0	0	.
chr9	132137068	132137069	chr9:132137069:A:G	rs117211616	A	G	A	SOX2_HMG_3	-4	0	+	0	0	.
chr9	132250479	132250480	chr9:132250480:C:G	rs144674862	C	G	C	SOX2_HMG_3	-2	0	+	0	0	.
chr9	132375085	132375086	chr9:132375086:A:G	rs7030233	A	G	A	SOX2_HMG_3	-2	0	+	0	0	.
chr9	132579614	132579615	chr9:132579615:G:C	rs431195	G	C	C	SOX2_HMG_3	-12	0	+	0	0	.
chr9	132579738	132579739	chr9:132579739:T:G	rs10122079	T	G	T	SOX2_HMG_3	-4	0	-	0	0	.
chr9	132855936	132855937	chr9:132855937:C:T	rs117201409	C	T	C	SOX2_HMG_3	32	0	-	0	0	.
chr9	133018602	133018603	chr9:133018603:C:T	rs3011286	C	T	T	SOX2_HMG_3	-4	0	+	0	0	.
chr9	133133489	133133490	chr9:133133490:G:A	rs753992641	G	A	G	SOX2_HMG_3	27	0	-	0	0	.
chr9	133133521	133133522	chr9:133133522:C:T	rs540336780	C	T	C	SOX2_HMG_3	-5	0	-	0	0	.
chr9	133252519	133252520	chr9:133252520:G:A	rs73660468	G	A	g	SOX2_HMG_3	-19	0	+	0	0	.
chr9	133252568	133252569	chr9:133252569:A:C	rs34039247	A	C	a	SOX2_HMG_3	30	0	+	0	0	.
chr9	133259145	133259146	chr9:133259146:T:A	rs8176710	T	A	t	SOX2_HMG_3	-7	0	+	0	0	.
chr9	133309564	133309565	chr9:133309565:C:A	rs878904399	C	A	-	SOX2_HMG_3	-7	0	-	0	0	.
chr9	133437562	133437563	chr9:133437563:T:C	rs3780809	T	C	T	SOX2_HMG_3	21	0	-	0	0	.
chr9	133647152	133647153	chr9:133647153:T:C	rs2519154	T	C	T	SOX2_HMG_3	2	1	-	3.357341104545875	3.357341104545875	GAACAATTTGAGTGAGA
chr9	133706898	133706899	chr9:133706899:G:A	rs4979632	G	A	G	SOX2_HMG_3	27	0	-	0	0	.
chr9	133765628	133765629	chr9:133765629:C:T	rs591866	C	T	T	SOX2_HMG_3	25	0	+	0	0	.
chr9	134037773	134037774	chr9:134037774:T:C	rs112892449	T	C	T	SOX2_HMG_3	-5	0	-	0	0	.
chr9	134349005	134349006	chr9:134349006:G:C	rs180886878	G	C	G	SOX2_HMG_3	-12	0	+	0	0	.
chr9	134737102	134737103	chr9:134737103:A:G	rs3109682	A	G	A	SOX2_HMG_3	2	1	-	3.328502354570991	-1.6748697157445958	GATCTATGGAAGTGGAG
chr9	135046004	135046005	chr9:135046005:T:C	rs10858322	T	C	C	SOX2_HMG_3	20	0	+	0	0	.
chr9	135148728	135148729	chr9:135148729:G:T	rs17039788	G	T	T	SOX2_HMG_3	-20	0	-	0	0	.
chr9	135377044	135377045	chr9:135377045:A:G	rs10745404	A	G	G	SOX2_HMG_3	-16	0	-	0	0	.
chr9	135415606	135415607	chr9:135415607:T:C	rs2921318	T	C	T	SOX2_HMG_3	-4	0	+	0	0	.
chr9	135485586	135485587	chr9:135485587:G:A	rs3827827	G	A	G	SOX2_HMG_3	-15	0	+	0	0	.
chr9	135817150	135817151	chr9:135817151:G:A	rs36056648	G	A	G	SOX2_HMG_3	25	0	-	0	0	.
chr9	135974989	135974990	chr9:135974990:C:T	rs11789650	C	T	C	SOX2_HMG_3	-17	0	-	0	0	.
chr9	136021942	136021943	chr9:136021943:C:T	rs4842076	C	T	T	SOX2_HMG_3	35	0	+	0	0	.
chr9	136513479	136513480	chr9:136513480:A:G	rs2229971	A	G	G	SOX2_HMG_3	4	1	+	2.0230127286963437	-4.885742050618875	ACTCATTGTTGTTGATG
chr9	136588838	136588839	chr9:136588839:T:C	rs147150131	T	C	T	SOX2_HMG_3	11	1	+	1.1588014537530977	-5.533890044479248	CATCAAAGCCATGGAGG
chr9	136922557	136922558	chr9:136922558:G:A	rs10283820	G	A	G	SOX2_HMG_3	30	0	+	0	0	.