chr1	633951	633952	chr1:633952:G:A	rs1439794969	G	A	.	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr1	1471255	1471256	chr1:1471256:G:C	rs888541276	G	C	G	Hoxd9_MA0913.1	21	0	-	0	0	.
chr1	1471268	1471269	chr1:1471269:G:C	rs534196531	G	C	G	Hoxd9_MA0913.1	8	1	-	7.801678332738202	8.2283733949328	GCAATAAACA
chr1	1567655	1567656	chr1:1567656:T:C	rs60445846	T	C	T	Hoxd9_MA0913.1	11	0	+	0	0	.
chr1	1841753	1841754	chr1:1841754:C:T	rs141182740	C	T	C	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr1	2067370	2067371	chr1:2067371:G:A	rs976944911	G	A	G	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr1	2274234	2274235	chr1:2274235:A:G	chr1:2274235:A:G	A	G	A	Hoxd9_MA0913.1	4	1	-	8.323343304007485	5.031209052232505	CCAATAAAAA
chr1	2983397	2983398	chr1:2983398:G:C	rs111828763	G	C	G	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr1	3161613	3161614	chr1:3161614:C:T	rs1331737653	C	T	C	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr1	3323634	3323635	chr1:3323635:G:A	rs870465	G	A	G	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr1	3716972	3716973	chr1:3716973:G:A	rs3765764	G	A	A	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr1	3839965	3839966	chr1:3839966:C:A	rs34211842	C	A	C	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr1	3839967	3839968	chr1:3839968:T:C	rs10797346	T	C	t	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr1	3858211	3858212	chr1:3858212:G:A	rs186701451	G	A	G	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr1	3870459	3870460	chr1:3870460:G:A	rs115336625	G	A	G	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr1	3880080	3880081	chr1:3880081:C:G	rs6666303	C	G	G	Hoxd9_MA0913.1	0	1	-	7.75646393805828	6.278465269675022	GCCATTAAAC
chr1	4227331	4227332	chr1:4227332:G:A	rs112629950	G	A	G	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr1	4428770	4428771	chr1:4428771:C:T	rs6667927	C	T	C	Hoxd9_MA0913.1	0	1	-	9.760171550280933	8.812437826870472	GCAATTAAAA
chr1	4506734	4506735	chr1:4506735:A:G	rs1870509	A	G	G	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr1	4550999	4551000	chr1:4551000:T:C	rs241246	T	C	C	Hoxd9_MA0913.1	24	0	+	0	0	.
chr1	4561263	4561264	chr1:4561264:G:A	rs113500797	G	A	G	Hoxd9_MA0913.1	25	0	+	0	0	.
chr1	4847642	4847643	chr1:4847643:T:C	rs11582327	T	C	C	Hoxd9_MA0913.1	16	0	-	0	0	.
chr1	5022079	5022080	chr1:5022080:A:G	rs10799153	A	G	A	Hoxd9_MA0913.1	6	1	+	7.932552609785828	1.1171319420064885	GCAGTTAAAA
chr1	5036612	5036613	chr1:5036613:T:G	rs72635359	T	G	T	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr1	5251991	5251992	chr1:5251992:C:T	rs580309	C	T	C	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr1	5267255	5267256	chr1:5267256:T:C	rs79689786	T	C	T	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr1	5267277	5267278	chr1:5267278:T:G	rs631837	T	G	T	Hoxd9_MA0913.1	9	1	+	8.079531266869532	6.856849963237993	CCAATAAAAT
chr1	5551758	5551759	chr1:5551759:A:G	rs2211416	A	G	A	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr1	5951371	5951372	chr1:5951372:A:G	rs78992379	A	G	A	Hoxd9_MA0913.1	6	1	+	8.293678209511443	1.4782575417321	GCAATTAAAG
chr1	5951389	5951390	chr1:5951390:T:C	rs59813043	T	C	T	Hoxd9_MA0913.1	24	0	+	0	0	.
chr1	6365463	6365464	chr1:6365464:C:G	rs77486438	C	G	C	Hoxd9_MA0913.1	23	0	-	0	0	.
chr1	6645295	6645296	chr1:6645296:A:G	rs200457	A	G	G	Hoxd9_MA0913.1	3	1	+	9.412035922551908	7.584416982056805	GTAATTAAAA
chr1	6646875	6646876	chr1:6646876:G:A	rs200453	G	A	G	Hoxd9_MA0913.1	19	0	+	0	0	.
chr1	6922002	6922003	chr1:6922003:A:T	rs76147892	A	T	A	Hoxd9_MA0913.1	29	0	+	0	0	.
chr1	6958658	6958659	chr1:6958659:A:G	rs11120797	A	G	A	Hoxd9_MA0913.1	19	0	+	0	0	.
chr1	6975769	6975770	chr1:6975770:A:G	rs6679134	A	G	A	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr1	7157845	7157846	chr1:7157846:C:T	rs10779676	C	T	C	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr1	7212959	7212960	chr1:7212960:T:C	rs12035586	T	C	T	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr1	7292082	7292083	chr1:7292083:T:A	rs6577434	T	A	A	Hoxd9_MA0913.1	28	0	+	0	0	.
chr1	7770201	7770202	chr1:7770202:T:C	rs2153733	T	C	T	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr1	7923391	7923392	chr1:7923392:C:T	rs76198826	C	T	C	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr1	7962249	7962250	chr1:7962250:A:T	rs114936523	A	T	A	Hoxd9_MA0913.1	28	0	+	0	0	.
chr1	8153417	8153418	chr1:8153418:G:A	rs184540824	G	A	G	Hoxd9_MA0913.1	3	1	+	7.7299109947576845	9.55752993525279	GCAGTAAAAT
chr1	8153449	8153450	chr1:8153450:A:G	rs4908740	A	G	G	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr1	8408217	8408218	chr1:8408218:A:G	rs301792	A	G	G	Hoxd9_MA0913.1	16	0	+	0	0	.
chr1	8619788	8619789	chr1:8619789:G:A	rs1953827	G	A	G	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr1	8634538	8634539	chr1:8634539:G:A	chr1:8634539:G:A	G	A	G	Hoxd9_MA0913.1	20	0	-	0	0	.
chr1	8668605	8668606	chr1:8668606:C:T	rs11121214	C	T	C	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr1	8756595	8756596	chr1:8756596:T:C	rs115678426	T	C	T	Hoxd9_MA0913.1	20	0	-	0	0	.
chr1	8854336	8854337	chr1:8854337:T:C	rs6577538	T	C	C	Hoxd9_MA0913.1	16	0	-	0	0	.
chr1	8854351	8854352	chr1:8854352:A:G	rs77361602	A	G	A	Hoxd9_MA0913.1	1	1	-	8.329997507299597	8.678133135028622	GTAATTAAAC
chr1	8871089	8871090	chr1:8871090:C:T	rs2274971	C	T	C	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr1	9009871	9009872	chr1:9009872:T:C	rs72632905	T	C	T	Hoxd9_MA0913.1	10	0	-	0	0	.
chr1	9086280	9086281	chr1:9086281:G:A	rs12402661	G	A	A	Hoxd9_MA0913.1	14	0	-	0	0	.
chr1	9208525	9208526	chr1:9208526:C:T	rs7551687	C	T	C	Hoxd9_MA0913.1	20	0	-	0	0	.
chr1	9208537	9208538	chr1:9208538:C:A	rs113739345	C	A	C	Hoxd9_MA0913.1	8	1	-	8.2283733949328	8.32301137036169	GCAATAAAGA
chr1	9421775	9421776	chr1:9421776:T:C	rs4130512	T	C	C	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr1	9621143	9621144	chr1:9621144:G:T	rs6663156	G	T	G	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr1	9732373	9732374	chr1:9732374:T:G	rs76908323	T	G	T	Hoxd9_MA0913.1	6	1	-	9.801341972390743	5.326765109722537	GCAATAAAAA
chr1	9822791	9822792	chr1:9822792:C:T	rs185159844	C	T	C	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr1	10170447	10170448	chr1:10170448:T:G	rs17034563	T	G	T	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr1	10340071	10340072	chr1:10340072:C:T	rs17034781	C	T	C	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr1	10340072	10340073	chr1:10340073:G:A	rs114540197	G	A	G	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr1	10340543	10340544	chr1:10340544:A:C	rs1555849	A	C	A	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr1	10388038	10388039	chr1:10388039:A:C	rs113533792	A	C	A	Hoxd9_MA0913.1	18	0	-	0	0	.
chr1	10495369	10495370	chr1:10495370:C:T	rs370623558	C	T	C	Hoxd9_MA0913.1	15	0	+	0	0	.
chr1	10495375	10495376	chr1:10495376:T:C	rs373556154	T	C	T	Hoxd9_MA0913.1	21	0	+	0	0	.
chr1	10675021	10675022	chr1:10675022:G:C	rs284314	G	C	C	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr1	10678789	10678790	chr1:10678790:A:T	rs114784407	A	T	A	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr1	10754880	10754881	chr1:10754881:C:T	rs205483	C	T	T	Hoxd9_MA0913.1	12	0	-	0	0	.
chr1	10907695	10907696	chr1:10907696:C:G	rs539389057	C	G	C	Hoxd9_MA0913.1	20	0	-	0	0	.
chr1	11105524	11105525	chr1:11105525:T:C	rs1477089863	T	C	T	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr1	11350425	11350426	chr1:11350426:T:G	rs2788559	T	G	G	Hoxd9_MA0913.1	2	1	-	9.51635951314298	8.594690316172638	GCAATTAAAT
chr1	11350426	11350427	chr1:11350427:G:C	rs2744846	G	C	C	Hoxd9_MA0913.1	1	1	-	9.51635951314298	6.423794500858266	GCAATTAAAT
chr1	11429197	11429198	chr1:11429198:C:T	rs877307	C	T	C	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr1	11475021	11475022	chr1:11475022:A:G	rs11121749	A	G	A	Hoxd9_MA0913.1	21	0	+	0	0	.
chr1	11506126	11506127	chr1:11506127:T:C	rs6702624	T	C	T	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr1	11868837	11868838	chr1:11868838:G:A	rs11803049	G	A	A	Hoxd9_MA0913.1	23	0	-	0	0	.
chr1	11881925	11881926	chr1:11881926:T:C	rs74052332	T	C	T	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr1	12099890	12099891	chr1:12099891:G:A	rs6681374	G	A	G	Hoxd9_MA0913.1	23	0	+	0	0	.
chr1	12342781	12342782	chr1:12342782:A:T	rs139791517	A	T	A	Hoxd9_MA0913.1	12	0	-	0	0	.
chr1	12342807	12342808	chr1:12342808:G:T	chr1:12342808:G:T	G	T	G	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr1	12512162	12512163	chr1:12512163:G:A	rs12564662	G	A	A	Hoxd9_MA0913.1	26	0	+	0	0	.
chr1	12693186	12693187	chr1:12693187:T:C	rs11121959	T	C	C	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr1	13630909	13630910	chr1:13630910:C:T	rs12143609	C	T	C	Hoxd9_MA0913.1	11	0	-	0	0	.
chr1	13699881	13699882	chr1:13699882:G:T	rs185150955	G	T	G	Hoxd9_MA0913.1	12	0	-	0	0	.
chr1	13757277	13757278	chr1:13757278:T:C	rs1203634	T	C	T	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr1	13804132	13804133	chr1:13804133:A:G	rs2281164	A	G	A	Hoxd9_MA0913.1	24	0	+	0	0	.
chr1	13815400	13815401	chr1:13815401:C:T	rs112705272	C	T	C	Hoxd9_MA0913.1	29	0	-	0	0	.
chr1	13873172	13873173	chr1:13873173:T:G	rs12408355	T	G	.	Hoxd9_MA0913.1	26	0	-	0	0	.
chr1	14037206	14037207	chr1:14037207:A:G	rs142450209	A	G	A	Hoxd9_MA0913.1	16	0	-	0	0	.
chr1	14142296	14142297	chr1:14142297:A:G	rs10803462	A	G	G	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr1	14320600	14320601	chr1:14320601:G:A	rs967892137	G	A	G	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr1	14320603	14320604	chr1:14320604:G:T	rs16853928	G	T	T	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr1	14477121	14477122	chr1:14477122:G:A	rs767584737	G	A	G	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr1	14497965	14497966	chr1:14497966:A:G	rs190995227	A	G	A	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr1	14736050	14736051	chr1:14736051:C:A	rs111662933	C	A	C	Hoxd9_MA0913.1	18	0	-	0	0	.
chr1	14804207	14804208	chr1:14804208:A:C	rs80091148	A	C	a	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr1	15107141	15107142	chr1:15107142:A:C	rs545416	A	C	A	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr1	15107143	15107144	chr1:15107144:T:G	rs545415	T	G	T	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr1	15107159	15107160	chr1:15107160:A:G	rs6429710	A	G	G	Hoxd9_MA0913.1	3	1	+	7.4131794346509094	5.585560494155805	GCCATAAAAG
chr1	15214576	15214577	chr1:15214577:A:G	rs7551863	A	G	G	Hoxd9_MA0913.1	12	0	-	0	0	.
chr1	15214577	15214578	chr1:15214578:C:A	rs182618155	C	A	C	Hoxd9_MA0913.1	11	0	-	0	0	.
chr1	15323908	15323909	chr1:15323909:G:A	rs189584904	G	A	G	Hoxd9_MA0913.1	10	0	+	0	0	.
chr1	15596203	15596204	chr1:15596204:T:C	rs80089113	T	C	T	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr1	15617051	15617052	chr1:15617052:T:C	rs114634909	T	C	T	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr1	15986676	15986677	chr1:15986677:C:T	rs3961710	C	T	C	Hoxd9_MA0913.1	16	0	-	0	0	.
chr1	16102042	16102043	chr1:16102043:T:C	rs61769920	T	C	C	Hoxd9_MA0913.1	1	1	+	8.531537147691377	8.879672775420401	GTCATAAAAA
chr1	16200033	16200034	chr1:16200034:G:A	rs221035	G	A	A	Hoxd9_MA0913.1	11	0	-	0	0	.
chr1	16676589	16676590	chr1:16676590:A:G	rs201194657	A	G	.	Hoxd9_MA0913.1	29	0	-	0	0	.
chr1	16729001	16729002	chr1:16729002:C:T	rs526315	C	T	.	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr1	17129231	17129232	chr1:17129232:C:T	rs74842796	C	T	T	Hoxd9_MA0913.1	20	0	-	0	0	.
chr1	17134228	17134229	chr1:17134229:A:G	rs2311191	A	G	G	Hoxd9_MA0913.1	28	0	-	0	0	.
chr1	17348221	17348222	chr1:17348222:C:T	rs12746252	C	T	C	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr1	17691026	17691027	chr1:17691027:T:C	rs871087	T	C	C	Hoxd9_MA0913.1	2	1	-	8.079199333223738	6.401740891765639	GCAATAAATT
chr1	17795588	17795589	chr1:17795589:A:G	rs6695001	A	G	G	Hoxd9_MA0913.1	23	0	+	0	0	.
chr1	17891368	17891369	chr1:17891369:T:C	rs12144760	T	C	T	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr1	18099106	18099107	chr1:18099107:C:T	rs4920428	C	T	C	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr1	18154002	18154003	chr1:18154003:C:A	rs9661678	C	A	C	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr1	18608778	18608779	chr1:18608779:A:T	rs72648780	A	T	A	Hoxd9_MA0913.1	11	0	-	0	0	.
chr1	18789765	18789766	chr1:18789766:C:T	rs77242866	C	T	C	Hoxd9_MA0913.1	22	0	+	0	0	.
chr1	19233234	19233235	chr1:19233235:A:G	rs16862625	A	G	G	Hoxd9_MA0913.1	2	1	+	7.984561357794846	6.307102916336748	GCAATAAAGT
chr1	19331329	19331330	chr1:19331330:G:A	rs9729832	G	A	G	Hoxd9_MA0913.1	1	1	-	8.879672775420401	8.531537147691377	GCCATAAAAA
chr1	19430585	19430586	chr1:19430586:T:C	rs114375611	T	C	T	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr1	19463375	19463376	chr1:19463376:C:T	rs756301603	C	T	C	Hoxd9_MA0913.1	1	1	+	7.4131794346509094	7.065043806921886	GCCATAAAAG
chr1	19505128	19505129	chr1:19505129:A:G	rs184563587	A	G	A	Hoxd9_MA0913.1	19	0	-	0	0	.
chr1	19505161	19505162	chr1:19505162:G:A	rs138757402	G	A	G	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr1	19875859	19875860	chr1:19875860:T:C	rs12403770	T	C	T	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr1	20032692	20032693	chr1:20032693:C:T	rs10799606	C	T	C	Hoxd9_MA0913.1	22	0	-	0	0	.
chr1	20226118	20226119	chr1:20226119:A:T	rs12725354	A	T	A	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr1	20267357	20267358	chr1:20267358:G:A	rs10753491	G	A	A	Hoxd9_MA0913.1	27	0	+	0	0	.
chr1	20371229	20371230	chr1:20371230:C:A	rs12141992	C	A	A	Hoxd9_MA0913.1	26	0	+	0	0	.
chr1	20632901	20632902	chr1:20632902:G:A	rs138967104	G	A	G	Hoxd9_MA0913.1	0	1	+	7.75646393805828	6.808730214647819	GCCATTAAAC
chr1	20632927	20632928	chr1:20632928:G:A	rs10916840	G	A	G	Hoxd9_MA0913.1	26	0	+	0	0	.
chr1	20634434	20634435	chr1:20634435:C:T	rs7541234	C	T	C	Hoxd9_MA0913.1	20	0	+	0	0	.
chr1	20929874	20929875	chr1:20929875:T:C	rs17416732	T	C	T	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr1	20937814	20937815	chr1:20937815:T:C	rs17450813	T	C	T	Hoxd9_MA0913.1	4	1	+	8.853608248980283	5.561473997205303	ACAATAAAAA
chr1	20982137	20982138	chr1:20982138:G:C	rs72652993	G	C	G	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr1	21410005	21410006	chr1:21410006:A:G	chr1:21410006:A:G	A	G	a	Hoxd9_MA0913.1	3	1	+	9.168223885413955	7.340604944918851	GTAATTAAAT
chr1	21516036	21516037	chr1:21516037:C:A	rs72874249	C	A	C	Hoxd9_MA0913.1	21	0	-	0	0	.
chr1	21934901	21934902	chr1:21934902:A:G	rs6684979	A	G	a	Hoxd9_MA0913.1	11	0	-	0	0	.
chr1	21966354	21966355	chr1:21966355:C:T	rs572692315	C	T	C	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr1	21966394	21966395	chr1:21966395:C:A	rs115357992	C	A	C	Hoxd9_MA0913.1	20	0	+	0	0	.
chr1	21984168	21984169	chr1:21984169:G:T	rs6426735	G	T	.	Hoxd9_MA0913.1	14	0	-	0	0	.
chr1	21995435	21995436	chr1:21995436:C:T	rs12566806	C	T	.	Hoxd9_MA0913.1	23	0	-	0	0	.
chr1	22011105	22011106	chr1:22011106:G:A	rs201646758	G	A	-	Hoxd9_MA0913.1	27	0	+	0	0	.
chr1	22092399	22092400	chr1:22092400:T:A	rs16831115	T	A	T	Hoxd9_MA0913.1	13	0	+	0	0	.
chr1	22419002	22419003	chr1:22419003:C:G	rs145013226	C	G	C	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr1	22539481	22539482	chr1:22539482:C:T	rs1010926	C	T	T	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr1	22539487	22539488	chr1:22539488:G:A	rs113334	G	A	A	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr1	22712967	22712968	chr1:22712968:G:A	rs145420058	G	A	G	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr1	22895161	22895162	chr1:22895162:C:T	rs309467	C	T	T	Hoxd9_MA0913.1	12	0	-	0	0	.
chr1	23169001	23169002	chr1:23169002:A:G	rs79130087	A	G	A	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr1	23475471	23475472	chr1:23475472:A:T	rs968280	A	T	A	Hoxd9_MA0913.1	5	1	+	8.879672775420401	8.838502353310592	GCCATAAAAA
chr1	23554420	23554421	chr1:23554421:G:A	rs34671368	G	A	G	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr1	23664918	23664919	chr1:23664919:T:C	rs7556093	T	C	T	Hoxd9_MA0913.1	20	0	-	0	0	.
chr1	23692287	23692288	chr1:23692288:C:A	rs150251180	C	A	C	Hoxd9_MA0913.1	20	0	+	0	0	.
chr1	23851591	23851592	chr1:23851592:G:C	rs1347801375	G	C	G	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr1	23892667	23892668	chr1:23892668:G:T	rs2501398	G	T	G	Hoxd9_MA0913.1	16	0	-	0	0	.
chr1	23897368	23897369	chr1:23897369:T:G	rs2502974	T	G	T	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr1	24100275	24100276	chr1:24100276:C:G	rs58066618	C	G	G	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr1	24201866	24201867	chr1:24201867:A:G	rs546622753	A	G	A	Hoxd9_MA0913.1	3	1	+	8.079531266869532	6.251912326374428	CCAATAAAAT
chr1	24393512	24393513	chr1:24393513:A:G	rs501748	A	G	G	Hoxd9_MA0913.1	8	1	+	7.973723031895638	6.4007544544376955	GCAGTAAAAA
chr1	24419124	24419125	chr1:24419125:G:A	rs1016209	G	A	A	Hoxd9_MA0913.1	16	0	-	0	0	.
chr1	24462459	24462460	chr1:24462460:G:A	rs6688953	G	A	G	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr1	24508310	24508311	chr1:24508311:G:T	rs190379093	G	T	G	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr1	25162249	25162250	chr1:25162250:A:G	rs9438893	A	G	G	Hoxd9_MA0913.1	2	1	+	8.079531266869532	6.402072825411433	CCAATAAAAT
chr1	25230612	25230613	chr1:25230613:C:T	rs78972152	C	T	C	Hoxd9_MA0913.1	11	0	+	0	0	.
chr1	25641282	25641283	chr1:25641283:A:G	rs3767909	A	G	a	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr1	25700147	25700148	chr1:25700148:T:C	rs1240421514	T	C	T	Hoxd9_MA0913.1	7	1	-	8.490366725581566	1.651222248227224	GTCATTAAAA
chr1	25818182	25818183	chr1:25818183:G:A	rs6872	G	A	G	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr1	25841351	25841352	chr1:25841352:A:G	rs213632	A	G	G	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr1	25861483	25861484	chr1:25861484:T:C	rs12067275	T	C	C	Hoxd9_MA0913.1	25	0	-	0	0	.
chr1	25907725	25907726	chr1:25907726:G:A	rs76808258	G	A	G	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr1	25985486	25985487	chr1:25985487:T:A	rs3767929	T	A	A	Hoxd9_MA0913.1	7	1	-	7.932552609785828	4.638705858067398	GCAGTTAAAA
chr1	26011166	26011167	chr1:26011167:A:G	rs35610657	A	G	a	Hoxd9_MA0913.1	3	1	+	9.801341972390743	7.973723031895638	GCAATAAAAA
chr1	26474737	26474738	chr1:26474738:C:A	rs72651510	C	A	C	Hoxd9_MA0913.1	0	1	-	9.51635951314298	6.4792168171901094	GCAATTAAAT
chr1	26602600	26602601	chr1:26602601:G:A	rs142402978	G	A	G	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr1	28240989	28240990	chr1:28240990:A:G	rs526050	A	G	A	Hoxd9_MA0913.1	13	0	-	0	0	.
chr1	28297305	28297306	chr1:28297306:G:A	rs10127666	G	A	G	Hoxd9_MA0913.1	24	0	+	0	0	.
chr1	28643247	28643248	chr1:28643248:G:T	chr1:28643248:G:T	G	T	G	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr1	28984004	28984005	chr1:28984005:G:A	rs148683159	G	A	G	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr1	29095302	29095303	chr1:29095303:A:G	rs1613500	A	G	A	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr1	29191780	29191781	chr1:29191781:A:G	rs3103882	A	G	G	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr1	29410799	29410800	chr1:29410800:C:T	rs183429411	C	T	C	Hoxd9_MA0913.1	13	0	-	0	0	.
chr1	29508870	29508871	chr1:29508871:C:A	rs9426277	C	A	C	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr1	29524795	29524796	chr1:29524796:C:G	rs4256781	C	G	C	Hoxd9_MA0913.1	10	0	+	0	0	.
chr1	29719329	29719330	chr1:29719330:C:G	rs75786077	C	G	C	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr1	29719339	29719340	chr1:29719340:A:G	rs78626297	A	G	A	Hoxd9_MA0913.1	3	1	+	8.853608248980283	7.025989308485178	ACAATAAAAA
chr1	29786196	29786197	chr1:29786197:A:G	rs16832905	A	G	N	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr1	29789035	29789036	chr1:29789036:T:C	rs4949453	T	C	N	Hoxd9_MA0913.1	21	0	+	0	0	.
chr1	30009348	30009349	chr1:30009349:C:T	rs4949536	C	T	C	Hoxd9_MA0913.1	16	0	+	0	0	.
chr1	30089415	30089416	chr1:30089416:A:C	rs7530417	A	C	A	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr1	30108719	30108720	chr1:30108720:A:G	rs2376907	A	G	A	Hoxd9_MA0913.1	24	0	+	0	0	.
chr1	30197472	30197473	chr1:30197473:A:G	rs16833382	A	G	A	Hoxd9_MA0913.1	17	0	+	0	0	.
chr1	30205429	30205430	chr1:30205430:A:G	rs4949556	A	G	a	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr1	30287108	30287109	chr1:30287109:T:C	rs463128	T	C	T	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr1	30344854	30344855	chr1:30344855:T:C	rs423228	T	C	.	Hoxd9_MA0913.1	29	0	-	0	0	.
chr1	30380668	30380669	chr1:30380669:G:A	rs12094268	G	A	.	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr1	30380669	30380670	chr1:30380670:A:G	rs12059294	A	G	.	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr1	30420371	30420372	chr1:30420372:C:G	chr1:30420372:C:G	C	G	C	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr1	30717932	30717933	chr1:30717933:G:A	rs557414976	G	A	G	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr1	30758832	30758833	chr1:30758833:C:T	rs3762297	C	T	C	Hoxd9_MA0913.1	26	0	+	0	0	.
chr1	30809243	30809244	chr1:30809244:A:G	rs183584920	A	G	A	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr1	30825253	30825254	chr1:30825254:G:C	rs79685321	G	C	G	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr1	31063895	31063896	chr1:31063896:C:G	rs2039649	C	G	C	Hoxd9_MA0913.1	16	0	+	0	0	.
chr1	31063900	31063901	chr1:31063901:G:A	rs2039650	G	A	G	Hoxd9_MA0913.1	21	0	+	0	0	.
chr1	31265568	31265569	chr1:31265569:A:G	rs7524117	A	G	G	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr1	31299723	31299724	chr1:31299724:A:G	rs4622114	A	G	A	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr1	31443906	31443907	chr1:31443907:T:C	rs13376569	T	C	T	Hoxd9_MA0913.1	3	1	-	8.323343304007485	6.495724363512382	CCAATAAAAA
chr1	31532682	31532683	chr1:31532683:A:G	rs7536399	A	G	A	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr1	31563071	31563072	chr1:31563072:C:A	rs753027984	C	A	C	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr1	31563087	31563088	chr1:31563088:G:C	rs114432509	G	C	G	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr1	32469066	32469067	chr1:32469067:T:A	rs75600973	T	A	C	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr1	33363372	33363373	chr1:33363373:C:T	rs76659845	C	T	C	Hoxd9_MA0913.1	23	0	-	0	0	.
chr1	33389647	33389648	chr1:33389648:C:T	rs118135536	C	T	C	Hoxd9_MA0913.1	20	0	-	0	0	.
chr1	33419301	33419302	chr1:33419302:T:C	rs60166288	T	C	T	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr1	33789365	33789366	chr1:33789366:A:G	rs1925338	A	G	A	Hoxd9_MA0913.1	28	0	-	0	0	.
chr1	34328551	34328552	chr1:34328552:T:C	rs10914914	T	C	T	Hoxd9_MA0913.1	27	0	-	0	0	.
chr1	34380411	34380412	chr1:34380412:C:T	rs72894376	C	T	C	Hoxd9_MA0913.1	10	0	-	0	0	.
chr1	34406018	34406019	chr1:34406019:G:A	rs732699	G	A	A	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr1	34652538	34652539	chr1:34652539:C:A	rs6425908	C	A	C	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr1	34711003	34711004	chr1:34711004:G:T	rs539009868	G	T	G	Hoxd9_MA0913.1	17	0	+	0	0	.
chr1	35215625	35215626	chr1:35215626:C:T	rs12091697	C	T	C	Hoxd9_MA0913.1	15	0	-	0	0	.
chr1	35463406	35463407	chr1:35463407:A:T	rs11583031	A	T	A	Hoxd9_MA0913.1	3	1	+	8.2283733949328	4.614033525803817	GCAATAAAGA
chr1	35735902	35735903	chr1:35735903:C:A	chr1:35735903:C:A	C	A	C	Hoxd9_MA0913.1	12	0	+	0	0	.
chr1	35973647	35973648	chr1:35973648:C:G	rs3736910	C	G	C	Hoxd9_MA0913.1	16	0	-	0	0	.
chr1	36011134	36011135	chr1:36011135:T:C	chr1:36011135:T:C	T	C	T	Hoxd9_MA0913.1	24	0	-	0	0	.
chr1	36149944	36149945	chr1:36149945:A:G	rs2231305	A	G	A	Hoxd9_MA0913.1	5	1	-	8.246554688443613	4.852923339184054	GTCATTAAAT
chr1	36301798	36301799	chr1:36301799:C:T	rs882799	C	T	T	Hoxd9_MA0913.1	13	0	+	0	0	.
chr1	36865301	36865302	chr1:36865302:T:G	chr1:36865302:T:G	T	G	T	Hoxd9_MA0913.1	1	1	+	9.412035922551908	6.667606537996219	GTAATTAAAA
chr1	36919081	36919082	chr1:36919082:T:C	rs10796894	T	C	C	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr1	37078621	37078622	chr1:37078622:A:G	rs218428	A	G	G	Hoxd9_MA0913.1	26	0	-	0	0	.
chr1	37281793	37281794	chr1:37281794:T:C	rs142632566	T	C	T	Hoxd9_MA0913.1	24	0	+	0	0	.
chr1	37281798	37281799	chr1:37281799:T:C	rs589228	T	C	T	Hoxd9_MA0913.1	29	0	+	0	0	.
chr1	37340911	37340912	chr1:37340912:T:A	rs1022554	T	A	A	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr1	37438980	37438981	chr1:37438981:A:G	rs72657756	A	G	A	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr1	38153032	38153033	chr1:38153033:C:T	rs112146215	C	T	C	Hoxd9_MA0913.1	0	1	-	9.51635951314298	8.568625789732518	GCAATTAAAT
chr1	38191538	38191539	chr1:38191539:A:C	chr1:38191539:A:C	A	C	A	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr1	38300625	38300626	chr1:38300626:C:T	rs1329969	C	T	T	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr1	38476916	38476917	chr1:38476917:A:G	rs6600433	A	G	A	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr1	38579102	38579103	chr1:38579103:G:T	rs12567896	G	T	G	Hoxd9_MA0913.1	28	0	+	0	0	.
chr1	38580131	38580132	chr1:38580132:C:G	rs189572973	C	G	C	Hoxd9_MA0913.1	15	0	+	0	0	.
chr1	38786731	38786732	chr1:38786732:T:C	rs1005766534	T	C	T	Hoxd9_MA0913.1	24	0	-	0	0	.
chr1	38898944	38898945	chr1:38898945:G:A	rs4970634	G	A	a	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr1	39278945	39278946	chr1:39278946:A:G	rs1537815	A	G	A	Hoxd9_MA0913.1	27	0	-	0	0	.
chr1	39318685	39318686	chr1:39318686:G:A	rs57633065	G	A	G	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr1	39710739	39710740	chr1:39710740:T:C	rs499976	T	C	T	Hoxd9_MA0913.1	3	1	-	8.282172881897674	6.454553941402571	CCAATTAAAA
chr1	39803448	39803449	chr1:39803449:G:A	rs12749446	G	A	g	Hoxd9_MA0913.1	24	0	-	0	0	.
chr1	39886912	39886913	chr1:39886913:C:T	rs116654038	C	T	C	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr1	39919925	39919926	chr1:39919926:A:G	rs72941605	A	G	A	Hoxd9_MA0913.1	8	1	+	8.246554688443613	6.673586110985671	GTCATTAAAT
chr1	40539328	40539329	chr1:40539329:T:C	rs6667105	T	C	C	Hoxd9_MA0913.1	23	0	-	0	0	.
chr1	40598283	40598284	chr1:40598284:A:G	rs669863	A	G	A	Hoxd9_MA0913.1	29	0	-	0	0	.
chr1	40854884	40854885	chr1:40854885:T:G	chr1:40854885:T:G	T	G	T	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr1	40854892	40854893	chr1:40854893:A:G	chr1:40854893:A:G	A	G	A	Hoxd9_MA0913.1	6	1	+	7.7976343601680895	0.9822136923887492	GCCATAAAAC
chr1	40854895	40854896	chr1:40854896:C:T	rs56025967	C	T	C	Hoxd9_MA0913.1	9	1	+	7.7976343601680895	8.635860738282448	GCCATAAAAC
chr1	41234782	41234783	chr1:41234783:C:G	rs11585600	C	G	C	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr1	41439560	41439561	chr1:41439561:G:A	rs12126237	G	A	G	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr1	41439600	41439601	chr1:41439601:C:T	rs4451540	C	T	C	Hoxd9_MA0913.1	26	0	+	0	0	.
chr1	41501853	41501854	chr1:41501854:G:A	rs920061886	G	A	G	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr1	41731928	41731929	chr1:41731929:T:C	rs147566778	T	C	T	Hoxd9_MA0913.1	8	1	+	8.32301137036169	7.801678332738202	GCAATAAATA
chr1	41841015	41841016	chr1:41841016:G:A	rs78199000	G	A	G	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr1	41841025	41841026	chr1:41841026:T:C	rs591655	T	C	C	Hoxd9_MA0913.1	9	1	+	9.209394307523764	8.371167929409406	GTAATAAAAT
chr1	41925836	41925837	chr1:41925837:T:G	rs183188132	T	G	T	Hoxd9_MA0913.1	13	0	+	0	0	.
chr1	42258578	42258579	chr1:42258579:C:G	rs17377240	C	G	c	Hoxd9_MA0913.1	29	0	-	0	0	.
chr1	42314968	42314969	chr1:42314969:C:T	rs2479463	C	T	T	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr1	42319349	42319350	chr1:42319350:C:T	rs2455083	C	T	C	Hoxd9_MA0913.1	26	0	+	0	0	.
chr1	42344495	42344496	chr1:42344496:C:T	rs115419073	C	T	C	Hoxd9_MA0913.1	21	0	+	0	0	.
chr1	42916344	42916345	chr1:42916345:G:A	rs12140825	G	A	G	Hoxd9_MA0913.1	21	0	-	0	0	.
chr1	43012005	43012006	chr1:43012006:T:C	rs658142	T	C	C	Hoxd9_MA0913.1	29	0	+	0	0	.
chr1	43173673	43173674	chr1:43173674:A:C	rs74883042	A	C	A	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr1	43472541	43472542	chr1:43472542:G:A	rs570039596	G	A	G	Hoxd9_MA0913.1	13	0	+	0	0	.
chr1	43945976	43945977	chr1:43945977:G:A	chr1:43945977:G:A	G	A	G	Hoxd9_MA0913.1	16	0	+	0	0	.
chr1	44006170	44006171	chr1:44006171:G:A	rs140141868	G	A	G	Hoxd9_MA0913.1	0	1	+	8.371167929409406	7.423434205998946	GTAATAAAAC
chr1	44112595	44112596	chr1:44112596:C:T	rs7529373	C	T	C	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr1	44524624	44524625	chr1:44524625:C:T	rs6697012	C	T	C	Hoxd9_MA0913.1	24	0	-	0	0	.
chr1	45687338	45687339	chr1:45687339:G:A	rs551549007	G	A	G	Hoxd9_MA0913.1	20	0	+	0	0	.
chr1	45775965	45775966	chr1:45775966:T:G	rs6683274	T	G	G	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr1	45869203	45869204	chr1:45869204:A:G	rs4660318	A	G	A	Hoxd9_MA0913.1	21	0	+	0	0	.
chr1	45931031	45931032	chr1:45931032:G:A	rs10789482	G	A	a	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr1	46600710	46600711	chr1:46600711:T:C	rs11211319	T	C	T	Hoxd9_MA0913.1	28	0	+	0	0	.
chr1	46700056	46700057	chr1:46700057:C:T	rs4553120	C	T	T	Hoxd9_MA0913.1	18	0	-	0	0	.
chr1	46991292	46991293	chr1:46991293:G:A	rs79022237	G	A	G	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr1	47503018	47503019	chr1:47503019:A:G	rs116042592	A	G	A	Hoxd9_MA0913.1	8	1	+	8.635860738282448	7.062892160824505	GCCATAAAAT
chr1	47523817	47523818	chr1:47523818:C:G	rs11799997	C	G	G	Hoxd9_MA0913.1	24	0	-	0	0	.
chr1	47598481	47598482	chr1:47598482:A:G	rs72888361	A	G	A	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr1	47749706	47749707	chr1:47749707:A:G	rs11579242	A	G	A	Hoxd9_MA0913.1	15	0	-	0	0	.
chr1	48244523	48244524	chr1:48244524:C:T	rs1524734	C	T	c	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr1	48872827	48872828	chr1:48872828:C:T	rs4565762	C	T	T	Hoxd9_MA0913.1	13	0	+	0	0	.
chr1	48960701	48960702	chr1:48960702:A:C	rs6699910	A	C	A	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr1	49798100	49798101	chr1:49798101:C:T	rs4926542	C	T	T	Hoxd9_MA0913.1	0	1	+	8.079531266869532	6.52038723929992	CCAATAAAAT
chr1	50425294	50425295	chr1:50425295:T:C	rs1278527	T	C	C	Hoxd9_MA0913.1	16	0	+	0	0	.
chr1	50735599	50735600	chr1:50735600:T:G	rs112618522	T	G	T	Hoxd9_MA0913.1	28	0	+	0	0	.
chr1	50851701	50851702	chr1:50851702:T:G	rs78738909	T	G	T	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr1	51737898	51737899	chr1:51737899:G:A	rs77083641	G	A	A	Hoxd9_MA0913.1	11	0	-	0	0	.
chr1	52632063	52632064	chr1:52632064:T:C	rs191973939	T	C	T	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr1	52745285	52745286	chr1:52745286:G:A	rs11206004	G	A	g	Hoxd9_MA0913.1	12	0	+	0	0	.
chr1	53023928	53023929	chr1:53023929:C:T	rs7536048	C	T	c	Hoxd9_MA0913.1	18	0	+	0	0	.
chr1	53206597	53206598	chr1:53206598:G:A	rs7539949	G	A	G	Hoxd9_MA0913.1	19	0	-	0	0	.
chr1	53257676	53257677	chr1:53257677:T:C	rs869988	T	C	T	Hoxd9_MA0913.1	12	0	+	0	0	.
chr1	53575178	53575179	chr1:53575179:A:C	chr1:53575179:A:C	A	C	A	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr1	53580882	53580883	chr1:53580883:T:C	rs941129	T	C	T	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr1	53602342	53602343	chr1:53602343:C:T	rs4927012	C	T	C	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr1	53889534	53889535	chr1:53889535:G:A	rs11206236	G	A	G	Hoxd9_MA0913.1	27	0	+	0	0	.
chr1	54135347	54135348	chr1:54135348:G:A	rs4927057	G	A	.	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr1	54220503	54220504	chr1:54220504:G:C	rs191278274	G	C	G	Hoxd9_MA0913.1	13	0	-	0	0	.
chr1	54451866	54451867	chr1:54451867:C:T	rs4328028	C	T	C	Hoxd9_MA0913.1	25	0	+	0	0	.
chr1	54741378	54741379	chr1:54741379:T:C	rs72911732	T	C	T	Hoxd9_MA0913.1	10	0	+	0	0	.
chr1	54857762	54857763	chr1:54857763:C:A	rs71637874	C	A	C	Hoxd9_MA0913.1	10	0	-	0	0	.
chr1	55073229	55073230	chr1:55073230:A:G	rs1752394	A	G	A	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr1	55132071	55132072	chr1:55132072:T:G	rs922009449	T	G	T	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr1	55134502	55134503	chr1:55134503:C:T	rs147741685	C	T	C	Hoxd9_MA0913.1	18	0	+	0	0	.
chr1	55440462	55440463	chr1:55440463:G:A	rs4636512	G	A	G	Hoxd9_MA0913.1	26	0	+	0	0	.
chr1	55457311	55457312	chr1:55457312:T:C	rs397876	T	C	C	Hoxd9_MA0913.1	3	1	-	7.4131794346509094	5.585560494155805	GCCATAAAAG
chr1	55529166	55529167	chr1:55529167:A:G	rs61774737	A	G	A	Hoxd9_MA0913.1	9	1	+	8.879672775420401	7.4131794346509094	GCCATAAAAA
chr1	55698182	55698183	chr1:55698183:C:T	rs2819487	C	T	C	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr1	55700889	55700890	chr1:55700890:C:G	rs183675450	C	G	C	Hoxd9_MA0913.1	24	0	+	0	0	.
chr1	56077201	56077202	chr1:56077202:T:G	rs1331856	T	G	G	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr1	56132951	56132952	chr1:56132952:C:A	rs4927305	C	A	C	Hoxd9_MA0913.1	1	1	+	8.853608248980283	6.433789872955025	ACAATAAAAA
chr1	56148584	56148585	chr1:56148585:G:A	rs61773369	G	A	G	Hoxd9_MA0913.1	1	1	-	8.32301137036169	7.974875742632667	GCAATAAATA
chr1	56376499	56376500	chr1:56376500:G:A	rs111885209	G	A	G	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr1	56397899	56397900	chr1:56397900:A:G	rs17113850	A	G	G	Hoxd9_MA0913.1	17	0	-	0	0	.
chr1	56410887	56410888	chr1:56410888:G:A	rs4489603	G	A	A	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr1	56661201	56661202	chr1:56661202:G:T	rs2796529	G	T	T	Hoxd9_MA0913.1	10	0	-	0	0	.
chr1	56715564	56715565	chr1:56715565:T:C	rs706467	T	C	C	Hoxd9_MA0913.1	7	1	-	8.60979621184233	1.7706517344879864	ACAATAAAAT
chr1	56786941	56786942	chr1:56786942:A:T	rs2275733	A	T	A	Hoxd9_MA0913.1	8	1	+	9.453206344661718	7.974875742632667	GTAATAAAAA
chr1	56787767	56787768	chr1:56787768:A:T	rs10889016	A	T	A	Hoxd9_MA0913.1	22	0	-	0	0	.
chr1	56799914	56799915	chr1:56799915:C:A	rs11206919	C	A	C	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr1	57157026	57157027	chr1:57157027:A:C	rs10889026	A	C	A	Hoxd9_MA0913.1	14	0	-	0	0	.
chr1	58394564	58394565	chr1:58394565:T:C	rs338928	T	C	C	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr1	58793206	58793207	chr1:58793207:C:T	rs11207306	C	T	C	Hoxd9_MA0913.1	11	0	-	0	0	.
chr1	58894311	58894312	chr1:58894312:G:C	rs4912204	G	C	G	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr1	59157308	59157309	chr1:59157309:G:T	rs588370	G	T	T	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr1	59392909	59392910	chr1:59392910:G:A	rs11583924	G	A	G	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr1	59470733	59470734	chr1:59470734:T:G	rs2407515	T	G	T	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr1	59470750	59470751	chr1:59470751:A:G	rs999268	A	G	G	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr1	59599847	59599848	chr1:59599848:A:G	rs12757929	A	G	g	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr1	59695583	59695584	chr1:59695584:G:A	rs4357555	G	A	G	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr1	59938320	59938321	chr1:59938321:G:A	rs61790302	G	A	G	Hoxd9_MA0913.1	20	0	-	0	0	.
chr1	60017387	60017388	chr1:60017388:T:C	rs12732780	T	C	T	Hoxd9_MA0913.1	12	0	-	0	0	.
chr1	60054688	60054689	chr1:60054689:T:A	rs12742425	T	A	T	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr1	60118239	60118240	chr1:60118240:C:T	rs637283	C	T	T	Hoxd9_MA0913.1	17	0	+	0	0	.
chr1	60414113	60414114	chr1:60414114:T:C	rs1392933	T	C	C	Hoxd9_MA0913.1	26	0	-	0	0	.
chr1	60414127	60414128	chr1:60414128:A:G	rs1335606	A	G	G	Hoxd9_MA0913.1	12	0	-	0	0	.
chr1	60436146	60436147	chr1:60436147:G:T	rs35151799	G	T	G	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr1	60637527	60637528	chr1:60637528:A:G	rs514512	A	G	G	Hoxd9_MA0913.1	24	0	-	0	0	.
chr1	60656199	60656200	chr1:60656200:C:A	rs489543	C	A	C	Hoxd9_MA0913.1	13	0	+	0	0	.
chr1	60679617	60679618	chr1:60679618:A:G	rs115192627	A	G	A	Hoxd9_MA0913.1	23	0	+	0	0	.
chr1	60889840	60889841	chr1:60889841:G:A	rs12121159	G	A	G	Hoxd9_MA0913.1	17	0	-	0	0	.
chr1	60917601	60917602	chr1:60917602:G:A	rs10889202	G	A	G	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr1	61005675	61005676	chr1:61005676:C:T	rs141910383	C	T	C	Hoxd9_MA0913.1	19	0	+	0	0	.
chr1	61255636	61255637	chr1:61255637:C:T	rs771017543	C	T	c	Hoxd9_MA0913.1	17	0	-	0	0	.
chr1	61399327	61399328	chr1:61399328:T:C	rs12402643	T	C	C	Hoxd9_MA0913.1	27	0	-	0	0	.
chr1	61448318	61448319	chr1:61448319:A:G	rs6656834	A	G	A	Hoxd9_MA0913.1	28	0	+	0	0	.
chr1	61485996	61485997	chr1:61485997:A:G	rs72668421	A	G	A	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr1	61540702	61540703	chr1:61540703:T:C	rs72668471	T	C	T	Hoxd9_MA0913.1	21	0	-	0	0	.
chr1	61873487	61873488	chr1:61873488:A:G	rs4518937	A	G	.	Hoxd9_MA0913.1	22	0	+	0	0	.
chr1	62022849	62022850	chr1:62022850:T:C	rs1123777	T	C	T	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr1	62022860	62022861	chr1:62022861:T:C	rs74479249	T	C	T	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr1	62026542	62026543	chr1:62026543:T:G	rs1332630	T	G	-	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr1	62029819	62029820	chr1:62029820:A:G	rs4915792	A	G	A	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr1	62031597	62031598	chr1:62031598:C:T	rs61775655	C	T	C	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr1	62092349	62092350	chr1:62092350:G:A	rs75323688	G	A	g	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr1	62173655	62173656	chr1:62173656:C:T	rs12119829	C	T	C	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr1	62173662	62173663	chr1:62173663:G:A	rs7553174	G	A	g	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr1	62182233	62182234	chr1:62182234:A:G	rs2481697	A	G	A	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr1	62192850	62192851	chr1:62192851:T:G	rs149922681	T	G	T	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr1	62275525	62275526	chr1:62275526:G:A	rs9803815	G	A	G	Hoxd9_MA0913.1	0	1	+	7.973723031895638	7.025989308485178	GCAGTAAAAA
chr1	62295805	62295806	chr1:62295806:G:A	rs2765267	G	A	G	Hoxd9_MA0913.1	23	0	-	0	0	.
chr1	62326073	62326074	chr1:62326074:A:G	rs2366210	A	G	A	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr1	62338400	62338401	chr1:62338401:C:T	rs76606429	C	T	C	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr1	62589798	62589799	chr1:62589799:G:A	rs11207996	G	A	G	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr1	62906642	62906643	chr1:62906643:C:G	rs111519921	C	G	C	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr1	62906667	62906668	chr1:62906668:T:G	rs138329753	T	G	T	Hoxd9_MA0913.1	21	0	+	0	0	.
chr1	63327483	63327484	chr1:63327484:A:G	rs10749738	A	G	G	Hoxd9_MA0913.1	10	0	+	0	0	.
chr1	63327989	63327990	chr1:63327990:C:T	rs116297346	C	T	C	Hoxd9_MA0913.1	1	1	+	7.984561357794846	7.636425730065822	GCAATAAAGT
chr1	63480109	63480110	chr1:63480110:T:C	rs12406864	T	C	T	Hoxd9_MA0913.1	20	0	+	0	0	.
chr1	63692225	63692226	chr1:63692226:G:C	rs6588061	G	C	T	Hoxd9_MA0913.1	22	0	+	0	0	.
chr1	63799867	63799868	chr1:63799868:C:T	rs645558	C	T	C	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr1	63903153	63903154	chr1:63903154:G:A	rs144216066	G	A	G	Hoxd9_MA0913.1	29	0	+	0	0	.
chr1	63984342	63984343	chr1:63984343:C:T	rs556849303	C	T	C	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr1	64043441	64043442	chr1:64043442:A:C	rs705534	A	C	C	Hoxd9_MA0913.1	8	1	+	8.287725110553424	6.2880614709008835	GTCATAAAAT
chr1	64172530	64172531	chr1:64172531:C:T	rs141696069	C	T	C	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr1	64267049	64267050	chr1:64267050:G:A	rs17126258	G	A	G	Hoxd9_MA0913.1	0	1	+	8.32301137036169	7.375277646951231	GCAATAAATA
chr1	64323099	64323100	chr1:64323100:G:A	rs1496018	G	A	G	Hoxd9_MA0913.1	16	0	+	0	0	.
chr1	64630600	64630601	chr1:64630601:T:A	rs6657923	T	A	T	Hoxd9_MA0913.1	3	1	-	8.853608248980283	5.2392683798513	ACAATAAAAA
chr1	64680606	64680607	chr1:64680607:A:G	rs12044266	A	G	A	Hoxd9_MA0913.1	17	0	-	0	0	.
chr1	64897952	64897953	chr1:64897953:G:A	rs17127141	G	A	G	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr1	64911719	64911720	chr1:64911720:G:A	rs61784741	G	A	G	Hoxd9_MA0913.1	9	1	+	8.334848631621252	9.801341972390743	GCAATAAAAG
chr1	65311018	65311019	chr1:65311019:G:A	rs6677968	G	A	G	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr1	65371598	65371599	chr1:65371599:A:G	rs6588137	A	G	T	Hoxd9_MA0913.1	28	0	+	0	0	.
chr1	65624024	65624025	chr1:65624025:A:G	rs17406429	A	G	A	Hoxd9_MA0913.1	4	1	-	8.812437826870472	5.520303575095493	ACAATTAAAA
chr1	65756072	65756073	chr1:65756073:A:C	rs10493386	A	C	A	Hoxd9_MA0913.1	6	1	+	9.55752993525279	5.0829530725845835	GCAATAAAAT
chr1	65964295	65964296	chr1:65964296:G:T	rs1318474	G	T	G	Hoxd9_MA0913.1	10	0	+	0	0	.
chr1	66140187	66140188	chr1:66140188:T:A	rs115796825	T	A	T	Hoxd9_MA0913.1	23	0	+	0	0	.
chr1	66253413	66253414	chr1:66253414:C:G	rs182789243	C	G	C	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr1	66253419	66253420	chr1:66253420:T:C	rs536804366	T	C	T	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr1	66295041	66295042	chr1:66295042:G:T	rs72677260	G	T	G	Hoxd9_MA0913.1	1	1	-	8.281840948251881	5.862022572226623	GCAATTAATA
chr1	66365995	66365996	chr1:66365996:T:C	rs72674140	T	C	T	Hoxd9_MA0913.1	14	0	+	0	0	.
chr1	66693974	66693975	chr1:66693975:G:A	rs11208949	G	A	G	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr1	66695130	66695131	chr1:66695131:C:T	rs1325267	C	T	C	Hoxd9_MA0913.1	18	0	+	0	0	.
chr1	67006008	67006009	chr1:67006009:A:T	rs2755256	A	T	T	Hoxd9_MA0913.1	4	1	-	8.853608248980283	6.166356824794127	ACAATAAAAA
chr1	67042230	67042231	chr1:67042231:C:G	rs7539628	C	G	C	Hoxd9_MA0913.1	24	0	+	0	0	.
chr1	67409849	67409850	chr1:67409850:T:A	rs4655708	T	A	T	Hoxd9_MA0913.1	11	0	-	0	0	.
chr1	67646318	67646319	chr1:67646319:A:T	chr1:67646319:A:T	A	T	A	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr1	67655826	67655827	chr1:67655827:G:A	rs6588282	G	A	G	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr1	67692148	67692149	chr1:67692149:G:A	rs674058	G	A	A	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr1	67766230	67766231	chr1:67766231:A:G	chr1:67766231:A:G	A	G	A	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr1	67810122	67810123	chr1:67810123:G:C	rs72924736	G	C	G	Hoxd9_MA0913.1	16	0	+	0	0	.
chr1	67838778	67838779	chr1:67838779:C:T	rs72924771	C	T	C	Hoxd9_MA0913.1	25	0	+	0	0	.
chr1	67841146	67841147	chr1:67841147:G:T	rs57940561	G	T	G	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr1	67886318	67886319	chr1:67886319:A:G	rs8179318	A	G	G	Hoxd9_MA0913.1	1	1	-	9.453206344661718	9.801341972390743	GTAATAAAAA
chr1	68307138	68307139	chr1:68307139:G:C	rs183607856	G	C	G	Hoxd9_MA0913.1	10	0	-	0	0	.
chr1	68623771	68623772	chr1:68623772:G:T	rs2223699	G	T	G	Hoxd9_MA0913.1	1	1	-	8.079199333223738	5.659380957198479	GCAATAAATT
chr1	68979916	68979917	chr1:68979917:A:G	rs7545526	A	G	A	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr1	69245952	69245953	chr1:69245953:C:T	rs2246327	C	T	T	Hoxd9_MA0913.1	8	1	-	8.187202972822991	9.760171550280933	GCAATTAAGA
chr1	69432760	69432761	chr1:69432761:G:C	rs7522980	G	C	G	Hoxd9_MA0913.1	17	0	-	0	0	.
chr1	69611766	69611767	chr1:69611767:T:C	rs1749501	T	C	C	Hoxd9_MA0913.1	4	1	+	8.323343304007485	5.031209052232505	CCAATAAAAA
chr1	70095759	70095760	chr1:70095760:T:G	rs7538198	T	G	T	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr1	70245552	70245553	chr1:70245553:A:G	rs1412867	A	G	G	Hoxd9_MA0913.1	19	0	-	0	0	.
chr1	70355196	70355197	chr1:70355197:G:A	rs55863806	G	A	G	Hoxd9_MA0913.1	12	0	+	0	0	.
chr1	70375658	70375659	chr1:70375659:A:G	rs60469831	A	G	A	Hoxd9_MA0913.1	4	1	-	7.75646393805828	4.4643296862833	GCCATTAAAC
chr1	70393753	70393754	chr1:70393754:A:T	rs4650046	A	T	T	Hoxd9_MA0913.1	6	1	+	9.760171550280933	7.336851602746947	GCAATTAAAA
chr1	71025805	71025806	chr1:71025806:G:A	rs10399705	G	A	G	Hoxd9_MA0913.1	0	1	+	7.7299109947576845	6.782177271347225	GCAGTAAAAT
chr1	71033474	71033475	chr1:71033475:C:T	rs2300178	C	T	C	Hoxd9_MA0913.1	25	0	-	0	0	.
chr1	71228717	71228718	chr1:71228718:G:T	rs149887975	G	T	G	Hoxd9_MA0913.1	11	0	+	0	0	.
chr1	71843325	71843326	chr1:71843326:C:A	rs577674	C	A	C	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr1	71885235	71885236	chr1:71885236:A:G	rs11209863	A	G	A	Hoxd9_MA0913.1	29	0	-	0	0	.
chr1	73521252	73521253	chr1:73521253:T:C	rs12126645	T	C	T	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr1	73619491	73619492	chr1:73619492:A:C	rs11210309	A	C	a	Hoxd9_MA0913.1	22	0	+	0	0	.
chr1	73802375	73802376	chr1:73802376:A:G	rs10493522	A	G	A	Hoxd9_MA0913.1	23	0	-	0	0	.
chr1	73886298	73886299	chr1:73886299:C:T	rs6701825	C	T	T	Hoxd9_MA0913.1	21	0	-	0	0	.
chr1	74436559	74436560	chr1:74436560:A:G	rs41289200	A	G	A	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr1	74620727	74620728	chr1:74620728:G:C	rs41289218	G	C	G	Hoxd9_MA0913.1	26	0	+	0	0	.
chr1	75209172	75209173	chr1:75209173:G:A	rs1405312	G	A	G	Hoxd9_MA0913.1	0	1	+	8.281840948251881	7.334107224841421	GCAATTAATA
chr1	75314342	75314343	chr1:75314343:C:T	rs10493570	C	T	C	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr1	75587393	75587394	chr1:75587394:T:C	rs4141466	T	C	T	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr1	75724122	75724123	chr1:75724123:G:C	rs538796144	G	C	G	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr1	75753189	75753190	chr1:75753190:C:T	rs1612097	C	T	c	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr1	76392759	76392760	chr1:76392760:C:T	rs1408866	C	T	C	Hoxd9_MA0913.1	11	0	+	0	0	.
chr1	76543119	76543120	chr1:76543120:G:A	rs11800951	G	A	g	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr1	76586231	76586232	chr1:76586232:T:G	rs150402190	T	G	T	Hoxd9_MA0913.1	22	0	-	0	0	.
chr1	76999241	76999242	chr1:76999242:A:G	rs74090575	A	G	A	Hoxd9_MA0913.1	11	0	+	0	0	.
chr1	77189868	77189869	chr1:77189869:C:T	rs71658785	C	T	C	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr1	77219609	77219610	chr1:77219610:G:A	rs528824837	G	A	G	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr1	77322776	77322777	chr1:77322777:C:G	rs17100317	C	G	C	Hoxd9_MA0913.1	14	0	+	0	0	.
chr1	77376069	77376070	chr1:77376070:T:C	rs34800536	T	C	T	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr1	77460609	77460610	chr1:77460610:A:C	rs7534707	A	C	A	Hoxd9_MA0913.1	9	1	+	8.879672775420401	7.7976343601680895	GCCATAAAAA
chr1	77604925	77604926	chr1:77604926:G:T	rs4949817	G	T	T	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr1	77874982	77874983	chr1:77874983:T:C	rs77222879	T	C	T	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr1	78130946	78130947	chr1:78130947:G:T	rs147472655	G	T	G	Hoxd9_MA0913.1	12	0	+	0	0	.
chr1	78148495	78148496	chr1:78148496:A:G	rs684657	A	G	A	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr1	78340137	78340138	chr1:78340138:G:A	rs116839537	G	A	G	Hoxd9_MA0913.1	21	0	+	0	0	.
chr1	78387944	78387945	chr1:78387945:T:C	rs140994146	T	C	T	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr1	78536903	78536904	chr1:78536904:A:G	rs12731181	A	G	G	Hoxd9_MA0913.1	5	1	+	8.60979621184233	2.388133058946461	ACAATAAAAT
chr1	78587249	78587250	chr1:78587250:C:T	rs1023254	C	T	C	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr1	78760383	78760384	chr1:78760384:G:A	rs72673998	G	A	g	Hoxd9_MA0913.1	0	1	+	9.453206344661718	8.505472621251258	GTAATAAAAA
chr1	78790419	78790420	chr1:78790420:C:T	rs2352521	C	T	T	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr1	79153166	79153167	chr1:79153167:C:T	rs72678178	C	T	C	Hoxd9_MA0913.1	18	0	+	0	0	.
chr1	79265204	79265205	chr1:79265205:T:G	rs11162666	T	G	G	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr1	79354920	79354921	chr1:79354921:A:G	rs2989850	A	G	A	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr1	79489036	79489037	chr1:79489037:A:G	rs58635031	A	G	A	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr1	79625772	79625773	chr1:79625773:A:C	chr1:79625773:A:C	A	C	A	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr1	79633531	79633532	chr1:79633532:C:T	rs11162765	C	T	T	Hoxd9_MA0913.1	0	1	+	8.323343304007485	6.764199276437873	CCAATAAAAA
chr1	79853288	79853289	chr1:79853289:G:A	rs12128751	G	A	A	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr1	80122980	80122981	chr1:80122981:G:A	rs4253878	G	A	A	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr1	80547752	80547753	chr1:80547753:G:A	rs11163051	G	A	G	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr1	80768779	80768780	chr1:80768780:G:A	rs2147082	G	A	A	Hoxd9_MA0913.1	0	1	+	9.209394307523764	8.261660584113304	GTAATAAAAT
chr1	80978894	80978895	chr1:80978895:A:G	rs4650502	A	G	A	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr1	81142496	81142497	chr1:81142497:T:G	rs1195688	T	G	T	Hoxd9_MA0913.1	18	0	-	0	0	.
chr1	81152295	81152296	chr1:81152296:C:T	rs12066876	C	T	T	Hoxd9_MA0913.1	0	1	-	8.635860738282448	7.688127014871988	GCCATAAAAT
chr1	81167692	81167693	chr1:81167693:A:G	rs3908548	A	G	A	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr1	81294145	81294146	chr1:81294146:T:C	rs1327611	T	C	T	Hoxd9_MA0913.1	29	0	+	0	0	.
chr1	81314854	81314855	chr1:81314855:A:G	rs17452799	A	G	G	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr1	81358609	81358610	chr1:81358610:T:C	rs6424749	T	C	T	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr1	81387641	81387642	chr1:81387642:T:C	rs4456134	T	C	t	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr1	81390582	81390583	chr1:81390583:T:G	rs5026587	T	G	T	Hoxd9_MA0913.1	17	0	-	0	0	.
chr1	81654436	81654437	chr1:81654437:C:T	rs17106872	C	T	C	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr1	81806335	81806336	chr1:81806336:G:A	rs74095925	G	A	G	Hoxd9_MA0913.1	11	0	-	0	0	.
chr1	81923217	81923218	chr1:81923218:G:A	rs993099	G	A	A	Hoxd9_MA0913.1	16	0	-	0	0	.
chr1	82114796	82114797	chr1:82114797:A:C	rs10874290	A	C	A	Hoxd9_MA0913.1	2	1	+	8.812437826870472	7.890768629900132	ACAATTAAAA
chr1	82159788	82159789	chr1:82159789:A:G	rs2009597	A	G	G	Hoxd9_MA0913.1	29	0	+	0	0	.
chr1	82349149	82349150	chr1:82349150:C:A	rs80260241	C	A	C	Hoxd9_MA0913.1	18	0	-	0	0	.
chr1	82397303	82397304	chr1:82397304:G:A	rs72941967	G	A	G	Hoxd9_MA0913.1	27	0	+	0	0	.
chr1	82562441	82562442	chr1:82562442:G:A	rs12066598	G	A	G	Hoxd9_MA0913.1	13	0	+	0	0	.
chr1	82565566	82565567	chr1:82565567:C:G	rs1768742	C	G	C	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr1	83142043	83142044	chr1:83142044:T:C	rs12410798	T	C	t	Hoxd9_MA0913.1	25	0	+	0	0	.
chr1	83583931	83583932	chr1:83583932:A:C	rs72946217	A	C	A	Hoxd9_MA0913.1	21	0	+	0	0	.
chr1	83769289	83769290	chr1:83769290:T:C	rs17129321	T	C	T	Hoxd9_MA0913.1	15	0	-	0	0	.
chr1	83950315	83950316	chr1:83950316:G:C	chr1:83950316:G:C	G	C	G	Hoxd9_MA0913.1	25	0	-	0	0	.
chr1	84253706	84253707	chr1:84253707:C:A	rs11163930	C	A	C	Hoxd9_MA0913.1	1	1	+	8.812437826870472	6.392619450845213	ACAATTAAAA
chr1	84525804	84525805	chr1:84525805:T:G	rs2292808	T	G	T	Hoxd9_MA0913.1	6	1	-	9.760171550280933	5.285594687612727	GCAATTAAAA
chr1	84573075	84573076	chr1:84573076:A:G	rs2911591	A	G	A	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr1	84573077	84573078	chr1:84573078:G:C	rs185123896	G	C	G	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr1	84634806	84634807	chr1:84634807:T:G	rs74095491	T	G	T	Hoxd9_MA0913.1	0	1	-	8.853608248980283	8.323343304007485	ACAATAAAAA
chr1	84701772	84701773	chr1:84701773:G:T	rs188925720	G	T	G	Hoxd9_MA0913.1	20	0	+	0	0	.
chr1	84703738	84703739	chr1:84703739:G:A	rs4551615	G	A	A	Hoxd9_MA0913.1	9	1	+	8.334848631621252	9.801341972390743	GCAATAAAAG
chr1	84721238	84721239	chr1:84721239:A:C	rs2911585	A	C	A	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr1	84749164	84749165	chr1:84749165:A:G	rs4405148	A	G	G	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr1	84810348	84810349	chr1:84810349:A:T	rs4243771	A	T	T	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr1	85240117	85240118	chr1:85240118:C:T	rs6663690	C	T	C	Hoxd9_MA0913.1	0	1	-	8.079199333223738	7.131465609813278	GCAATAAATT
chr1	85258599	85258600	chr1:85258600:C:T	rs75989026	C	T	C	Hoxd9_MA0913.1	26	0	-	0	0	.
chr1	85258644	85258645	chr1:85258645:C:T	rs4949926	C	T	C	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr1	85261360	85261361	chr1:85261361:T:C	rs11161574	T	C	C	Hoxd9_MA0913.1	23	0	-	0	0	.
chr1	85361930	85361931	chr1:85361931:C:T	rs74098806	C	T	C	Hoxd9_MA0913.1	24	0	+	0	0	.
chr1	85397699	85397700	chr1:85397700:G:A	rs3949301	G	A	A	Hoxd9_MA0913.1	1	1	-	8.678133135028622	8.329997507299597	GCAATTAAAC
chr1	85571897	85571898	chr1:85571898:T:C	rs28505588	T	C	C	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr1	85934939	85934940	chr1:85934940:C:A	rs145716861	C	A	C	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr1	85940774	85940775	chr1:85940775:G:A	rs560203819	G	A	G	Hoxd9_MA0913.1	26	0	+	0	0	.
chr1	86258839	86258840	chr1:86258840:T:C	rs912073	T	C	C	Hoxd9_MA0913.1	13	0	+	0	0	.
chr1	86409515	86409516	chr1:86409516:T:C	rs80173692	T	C	T	Hoxd9_MA0913.1	23	0	+	0	0	.
chr1	86423443	86423444	chr1:86423444:C:T	rs12747430	C	T	C	Hoxd9_MA0913.1	15	0	+	0	0	.
chr1	86487227	86487228	chr1:86487228:T:C	rs5744371	T	C	C	Hoxd9_MA0913.1	10	0	-	0	0	.
chr1	86518823	86518824	chr1:86518824:G:A	rs1321685	G	A	g	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr1	86715001	86715002	chr1:86715002:T:C	rs1374870439	T	C	T	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr1	86726671	86726672	chr1:86726672:G:T	rs74097423	G	T	G	Hoxd9_MA0913.1	1	1	-	8.812437826870472	6.392619450845213	ACAATTAAAA
chr1	87053340	87053341	chr1:87053341:A:G	rs61773085	A	G	A	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr1	87427448	87427449	chr1:87427449:G:A	rs2152735	G	A	G	Hoxd9_MA0913.1	22	0	+	0	0	.
chr1	87684661	87684662	chr1:87684662:C:T	rs78606214	C	T	C	Hoxd9_MA0913.1	24	0	+	0	0	.
chr1	87826977	87826978	chr1:87826978:T:C	rs13375846	T	C	T	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr1	88371238	88371239	chr1:88371239:G:C	rs10923065	G	C	C	Hoxd9_MA0913.1	0	1	+	7.973723031895638	6.495724363512382	GCAGTAAAAA
chr1	88374224	88374225	chr1:88374225:C:T	rs9428008	C	T	T	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr1	88485091	88485092	chr1:88485092:T:C	rs10923081	T	C	T	Hoxd9_MA0913.1	3	1	-	8.334848631621252	6.507229691126146	GCAATAAAAG
chr1	88683371	88683372	chr1:88683372:C:T	rs17130568	C	T	C	Hoxd9_MA0913.1	17	0	+	0	0	.
chr1	88686046	88686047	chr1:88686047:G:A	rs1490739	G	A	A	Hoxd9_MA0913.1	12	0	-	0	0	.
chr1	89050000	89050001	chr1:89050001:T:C	rs71666210	T	C	T	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr1	89129089	89129090	chr1:89129090:C:T	rs181287654	C	T	C	Hoxd9_MA0913.1	23	0	+	0	0	.
chr1	89129093	89129094	chr1:89129094:G:A	rs116239772	G	A	G	Hoxd9_MA0913.1	27	0	+	0	0	.
chr1	89429266	89429267	chr1:89429267:C:T	rs12744463	C	T	T	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr1	89433459	89433460	chr1:89433460:G:A	rs11577456	G	A	G	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr1	89723767	89723768	chr1:89723768:A:G	rs12078721	A	G	A	Hoxd9_MA0913.1	15	0	+	0	0	.
chr1	89906107	89906108	chr1:89906108:G:A	rs1344058	G	A	G	Hoxd9_MA0913.1	10	0	-	0	0	.
chr1	89939202	89939203	chr1:89939203:G:A	rs183585633	G	A	G	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr1	89980909	89980910	chr1:89980910:C:A	rs2816872	C	A	A	Hoxd9_MA0913.1	1	1	+	8.568625789732518	6.14880741370726	ACAATTAAAT
chr1	90067392	90067393	chr1:90067393:C:G	rs114377071	C	G	C	Hoxd9_MA0913.1	14	0	+	0	0	.
chr1	90102589	90102590	chr1:90102590:G:A	rs12122986	G	A	G	Hoxd9_MA0913.1	0	1	+	9.55752993525279	8.60979621184233	GCAATAAAAT
chr1	90106050	90106051	chr1:90106051:C:T	rs78683857	C	T	T	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr1	90175602	90175603	chr1:90175603:G:T	rs10922790	G	T	G	Hoxd9_MA0913.1	29	0	-	0	0	.
chr1	90176235	90176236	chr1:90176236:C:T	rs9782925	C	T	C	Hoxd9_MA0913.1	1	1	+	9.55752993525279	9.209394307523764	GCAATAAAAT
chr1	90675441	90675442	chr1:90675442:T:A	rs66583506	T	A	T	Hoxd9_MA0913.1	13	0	+	0	0	.
chr1	91092145	91092146	chr1:91092146:G:C	rs10922951	G	C	G	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr1	91124672	91124673	chr1:91124673:C:T	rs1828024	C	T	C	Hoxd9_MA0913.1	0	1	-	7.3720090125411	6.424275289130639	GCCATTAAAG
chr1	91149125	91149126	chr1:91149126:G:C	rs11580011	G	C	G	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr1	91263588	91263589	chr1:91263589:A:T	rs4658206	A	T	T	Hoxd9_MA0913.1	14	0	-	0	0	.
chr1	91458136	91458137	chr1:91458137:A:G	rs113406065	A	G	G	Hoxd9_MA0913.1	6	1	+	8.079531266869532	1.264110599090191	CCAATAAAAT
chr1	91596582	91596583	chr1:91596583:T:G	rs6604046	T	G	T	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr1	91732766	91732767	chr1:91732767:A:C	chr1:91732767:A:C	A	C	A	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr1	91753806	91753807	chr1:91753807:T:A	rs12038005	T	A	T	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr1	91914991	91914992	chr1:91914992:C:T	rs11165785	C	T	C	Hoxd9_MA0913.1	29	0	-	0	0	.
chr1	91915013	91915014	chr1:91915014:T:G	rs56323961	T	G	T	Hoxd9_MA0913.1	7	1	-	9.760171550280933	6.466324798562502	GCAATTAAAA
chr1	91934549	91934550	chr1:91934550:T:C	rs10875065	T	C	T	Hoxd9_MA0913.1	19	0	-	0	0	.
chr1	91997929	91997930	chr1:91997930:G:A	rs1038907989	G	A	.	Hoxd9_MA0913.1	10	0	+	0	0	.
chr1	92300507	92300508	chr1:92300508:C:G	rs17578954	C	G	C	Hoxd9_MA0913.1	14	0	-	0	0	.
chr1	92487087	92487088	chr1:92487088:A:G	chr1:92487088:A:G	A	G	A	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr1	92487102	92487103	chr1:92487103:T:A	rs191594978	T	A	T	Hoxd9_MA0913.1	4	1	+	7.4131794346509094	4.725928010464753	GCCATAAAAG
chr1	92487102	92487103	chr1:92487103:T:C	chr1:92487103:T:C	T	C	T	Hoxd9_MA0913.1	4	1	+	7.4131794346509094	4.12104518287593	GCCATAAAAG
chr1	92653852	92653853	chr1:92653853:G:A	rs11578098	G	A	G	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr1	92711883	92711884	chr1:92711884:T:A	rs6604008	T	A	T	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr1	92833198	92833199	chr1:92833199:T:C	rs1854797	T	C	C	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr1	93016173	93016174	chr1:93016174:C:G	rs150612204	C	G	C	Hoxd9_MA0913.1	0	1	-	9.209394307523764	7.731395639140507	GTAATAAAAT
chr1	93564976	93564977	chr1:93564977:C:T	rs237435	C	T	T	Hoxd9_MA0913.1	1	1	+	8.594690316172638	8.246554688443613	GCCATTAAAT
chr1	93768856	93768857	chr1:93768857:T:C	rs12409459	T	C	T	Hoxd9_MA0913.1	18	0	+	0	0	.
chr1	93797721	93797722	chr1:93797722:T:C	rs74101548	T	C	T	Hoxd9_MA0913.1	12	0	+	0	0	.
chr1	93814021	93814022	chr1:93814022:G:A	rs138187179	G	A	G	Hoxd9_MA0913.1	15	0	-	0	0	.
chr1	93960921	93960922	chr1:93960922:G:C	rs142617502	G	C	G	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr1	94084998	94084999	chr1:94084999:A:G	rs546550	A	G	A	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr1	94143336	94143337	chr1:94143337:G:C	rs871661	G	C	G	Hoxd9_MA0913.1	23	0	+	0	0	.
chr1	94232023	94232024	chr1:94232024:C:G	rs67070250	C	G	C	Hoxd9_MA0913.1	26	0	-	0	0	.
chr1	94254296	94254297	chr1:94254297:T:C	rs17111259	T	C	T	Hoxd9_MA0913.1	27	0	+	0	0	.
chr1	94419361	94419362	chr1:94419362:T:G	rs113396682	T	G	T	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr1	94587657	94587658	chr1:94587658:C:T	rs11165176	C	T	C	Hoxd9_MA0913.1	15	0	-	0	0	.
chr1	94587681	94587682	chr1:94587682:T:A	rs1324217	T	A	A	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr1	94624063	94624064	chr1:94624064:G:C	rs3814015	G	C	G	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr1	94634202	94634203	chr1:94634203:C:T	rs9645363	C	T	C	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr1	94634990	94634991	chr1:94634991:T:C	chr1:94634991:T:C	T	C	T	Hoxd9_MA0913.1	12	0	+	0	0	.
chr1	94654594	94654595	chr1:94654595:T:C	rs6658715	T	C	T	Hoxd9_MA0913.1	25	0	+	0	0	.
chr1	94668689	94668690	chr1:94668690:C:T	rs72731503	C	T	C	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr1	94668712	94668713	chr1:94668713:T:G	rs11165202	T	G	G	Hoxd9_MA0913.1	9	1	+	7.7299109947576845	6.507229691126146	GCAGTAAAAT
chr1	94687135	94687136	chr1:94687136:A:G	rs865848	A	G	A	Hoxd9_MA0913.1	15	0	-	0	0	.
chr1	94687159	94687160	chr1:94687160:T:C	rs1344170	T	C	T	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr1	94687160	94687161	chr1:94687161:G:T	rs3905416	G	T	G	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr1	94698879	94698880	chr1:94698880:T:A	rs1689178	T	A	A	Hoxd9_MA0913.1	19	0	-	0	0	.
chr1	94698908	94698909	chr1:94698909:C:T	rs4847345	C	T	C	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr1	94792840	94792841	chr1:94792841:C:T	rs146529967	C	T	C	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr1	94792841	94792842	chr1:94792842:G:A	rs948710155	G	A	G	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr1	94902092	94902093	chr1:94902093:T:C	rs859058	T	C	T	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr1	94902112	94902113	chr1:94902113:G:A	rs2275613	G	A	G	Hoxd9_MA0913.1	14	0	+	0	0	.
chr1	94981108	94981109	chr1:94981109:G:C	rs182469782	G	C	G	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr1	95043027	95043028	chr1:95043028:A:C	rs60555923	A	C	C	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr1	95088003	95088004	chr1:95088004:A:T	rs4556411	A	T	T	Hoxd9_MA0913.1	13	0	+	0	0	.
chr1	95094825	95094826	chr1:95094826:T:C	rs12569038	T	C	T	Hoxd9_MA0913.1	12	0	+	0	0	.
chr1	95118400	95118401	chr1:95118401:C:T	rs74568685	C	T	C	Hoxd9_MA0913.1	17	0	-	0	0	.
chr1	95239496	95239497	chr1:95239497:A:G	rs3767316	A	G	A	Hoxd9_MA0913.1	4	1	-	9.55752993525279	6.265395683477809	GCAATAAAAT
chr1	95311009	95311010	chr1:95311010:G:C	rs12066238	G	C	G	Hoxd9_MA0913.1	16	0	-	0	0	.
chr1	95452289	95452290	chr1:95452290:A:G	rs17327745	A	G	A	Hoxd9_MA0913.1	22	0	-	0	0	.
chr1	95652750	95652751	chr1:95652751:G:A	rs17114028	G	A	G	Hoxd9_MA0913.1	21	0	+	0	0	.
chr1	95850717	95850718	chr1:95850718:T:C	rs4949973	T	C	T	Hoxd9_MA0913.1	25	0	+	0	0	.
chr1	95863112	95863113	chr1:95863113:G:T	rs12742524	G	T	G	Hoxd9_MA0913.1	24	0	+	0	0	.
chr1	96010223	96010224	chr1:96010224:G:A	rs146815349	G	A	G	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr1	96010237	96010238	chr1:96010238:A:G	rs531312120	A	G	A	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr1	96131498	96131499	chr1:96131499:T:C	rs1402807	T	C	T	Hoxd9_MA0913.1	20	0	-	0	0	.
chr1	96332250	96332251	chr1:96332251:C:T	rs326671	C	T	C	Hoxd9_MA0913.1	16	0	-	0	0	.
chr1	96427443	96427444	chr1:96427444:G:A	rs11165623	G	A	A	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr1	96731009	96731010	chr1:96731010:T:G	rs6701205	T	G	T	Hoxd9_MA0913.1	14	0	-	0	0	.
chr1	96865987	96865988	chr1:96865988:C:T	rs12062222	C	T	T	Hoxd9_MA0913.1	25	0	+	0	0	.
chr1	97048846	97048847	chr1:97048847:C:A	rs72724352	C	A	C	Hoxd9_MA0913.1	19	0	+	0	0	.
chr1	97092056	97092057	chr1:97092057:C:T	rs72724369	C	T	C	Hoxd9_MA0913.1	2	1	+	7.75646393805828	2.2277891031778383	GCCATTAAAC
chr1	97155430	97155431	chr1:97155431:A:C	rs11165791	A	C	A	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr1	97368528	97368529	chr1:97368529:T:C	rs146058141	T	C	T	Hoxd9_MA0913.1	3	1	-	8.2283733949328	6.4007544544376955	GCAATAAAGA
chr1	97412904	97412905	chr1:97412905:G:A	rs6687374	G	A	A	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr1	98390101	98390102	chr1:98390102:C:G	rs115706908	C	G	C	Hoxd9_MA0913.1	15	0	+	0	0	.
chr1	98399342	98399343	chr1:98399343:T:C	rs10783090	T	C	C	Hoxd9_MA0913.1	4	1	+	8.568625789732518	5.276491537957539	ACAATTAAAT
chr1	98432143	98432144	chr1:98432144:A:G	rs12034466	A	G	A	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr1	98452886	98452887	chr1:98452887:A:C	rs1434371	A	C	C	Hoxd9_MA0913.1	28	0	-	0	0	.
chr1	98566265	98566266	chr1:98566266:G:A	rs17118690	G	A	G	Hoxd9_MA0913.1	29	0	-	0	0	.
chr1	98675436	98675437	chr1:98675437:T:A	rs9659362	T	A	T	Hoxd9_MA0913.1	25	0	-	0	0	.
chr1	98675447	98675448	chr1:98675448:G:A	rs9660123	G	A	G	Hoxd9_MA0913.1	14	0	-	0	0	.
chr1	98714051	98714052	chr1:98714052:C:T	rs9434426	C	T	C	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr1	99132271	99132272	chr1:99132272:G:A	rs982510620	G	A	G	Hoxd9_MA0913.1	10	0	-	0	0	.
chr1	99180666	99180667	chr1:99180667:T:C	rs17491965	T	C	T	Hoxd9_MA0913.1	2	1	-	8.719303557138431	7.041845115680332	GCAATAAAAC
chr1	99327618	99327619	chr1:99327619:A:C	rs10493910	A	C	A	Hoxd9_MA0913.1	26	0	-	0	0	.
chr1	99500762	99500763	chr1:99500763:A:G	rs12132420	A	G	G	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr1	99636728	99636729	chr1:99636729:A:G	rs12730100	A	G	A	Hoxd9_MA0913.1	21	0	+	0	0	.
chr1	99707777	99707778	chr1:99707778:G:T	rs200650891	G	T	G	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr1	99753453	99753454	chr1:99753454:C:T	rs6577135	C	T	T	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr1	100219574	100219575	chr1:100219575:A:G	rs11166417	A	G	A	Hoxd9_MA0913.1	20	0	+	0	0	.
chr1	100747975	100747976	chr1:100747976:A:G	rs10875332	A	G	G	Hoxd9_MA0913.1	19	0	-	0	0	.
chr1	100972494	100972495	chr1:100972495:A:G	rs17408707	A	G	A	Hoxd9_MA0913.1	29	0	-	0	0	.
chr1	101136897	101136898	chr1:101136898:A:G	rs589045	A	G	A	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr1	101237594	101237595	chr1:101237595:C:T	rs1050691441	C	T	C	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr1	101283101	101283102	chr1:101283102:G:T	rs6663691	G	T	G	Hoxd9_MA0913.1	1	1	-	8.60979621184233	6.1899778358170705	ACAATAAAAT
chr1	101308297	101308298	chr1:101308298:A:G	rs143496239	A	G	A	Hoxd9_MA0913.1	3	1	+	8.287725110553424	6.460106170058319	GTCATAAAAT
chr1	101486434	101486435	chr1:101486435:T:C	rs12037883	T	C	T	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr1	101733556	101733557	chr1:101733557:G:T	rs74825997	G	T	G	Hoxd9_MA0913.1	0	1	+	8.329997507299597	5.292854811346727	GTAATTAAAC
chr1	102766960	102766961	chr1:102766961:T:G	rs7521799	T	G	T	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr1	102782283	102782284	chr1:102782284:G:C	rs79453363	G	C	G	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr1	102837825	102837826	chr1:102837826:C:T	rs573190900	C	T	C	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr1	102896550	102896551	chr1:102896551:C:T	rs142314646	C	T	C	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr1	103180690	103180691	chr1:103180691:C:A	rs6674625	C	A	C	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr1	103191380	103191381	chr1:103191381:A:G	rs12074606	A	G	A	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr1	104214160	104214161	chr1:104214161:C:T	rs4387187	C	T	C	Hoxd9_MA0913.1	23	0	+	0	0	.
chr1	104602721	104602722	chr1:104602722:C:T	rs114428795	C	T	c	Hoxd9_MA0913.1	0	1	-	8.32301137036169	7.375277646951231	GCAATAAATA
chr1	104604434	104604435	chr1:104604435:A:G	rs546928118	A	G	a	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr1	105619161	105619162	chr1:105619162:A:G	rs12029549	A	G	A	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr1	105630467	105630468	chr1:105630468:G:T	rs11585693	G	T	G	Hoxd9_MA0913.1	25	0	-	0	0	.
chr1	105914259	105914260	chr1:105914260:G:C	rs12751498	G	C	G	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr1	106111366	106111367	chr1:106111367:T:A	rs80217199	T	A	.	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr1	106236285	106236286	chr1:106236286:C:T	rs10881374	C	T	C	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr1	106406132	106406133	chr1:106406133:G:A	rs1831384	G	A	G	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr1	106647439	106647440	chr1:106647440:A:G	rs6702604	A	G	A	Hoxd9_MA0913.1	3	1	+	8.853608248980283	7.025989308485178	ACAATAAAAA
chr1	107089918	107089919	chr1:107089919:T:C	rs1762490	T	C	T	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr1	107143795	107143796	chr1:107143796:T:C	rs4481881	T	C	C	Hoxd9_MA0913.1	9	1	+	9.168223885413955	8.329997507299597	GTAATTAAAT
chr1	107449085	107449086	chr1:107449086:A:G	rs501332	A	G	A	Hoxd9_MA0913.1	12	0	-	0	0	.
chr1	107487470	107487471	chr1:107487471:T:C	rs599873	T	C	T	Hoxd9_MA0913.1	11	0	-	0	0	.
chr1	107680203	107680204	chr1:107680204:A:G	rs6657056	A	G	A	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr1	107682495	107682496	chr1:107682496:T:C	rs2504454	T	C	T	Hoxd9_MA0913.1	14	0	-	0	0	.
chr1	107682496	107682497	chr1:107682497:G:A	rs188097172	G	A	G	Hoxd9_MA0913.1	13	0	-	0	0	.
chr1	107754600	107754601	chr1:107754601:T:C	rs13375446	T	C	T	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr1	107899889	107899890	chr1:107899890:T:C	rs10494082	T	C	T	Hoxd9_MA0913.1	27	0	+	0	0	.
chr1	108049631	108049632	chr1:108049632:A:G	rs79306747	A	G	A	Hoxd9_MA0913.1	25	0	+	0	0	.
chr1	108125189	108125190	chr1:108125190:C:T	rs77841943	C	T	C	Hoxd9_MA0913.1	10	0	-	0	0	.
chr1	108328330	108328331	chr1:108328331:C:G	rs57437924	C	G	c	Hoxd9_MA0913.1	24	0	-	0	0	.
chr1	108342260	108342261	chr1:108342261:A:G	rs6583083	A	G	.	Hoxd9_MA0913.1	26	0	+	0	0	.
chr1	108559533	108559534	chr1:108559534:T:C	rs2769973	T	C	T	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr1	108816305	108816306	chr1:108816306:C:T	rs116668447	C	T	C	Hoxd9_MA0913.1	28	0	-	0	0	.
chr1	108816335	108816336	chr1:108816336:T:C	rs6696787	T	C	T	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr1	108839755	108839756	chr1:108839756:C:A	rs74631214	C	A	C	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr1	108876723	108876724	chr1:108876724:C:T	chr1:108876724:C:T	C	T	C	Hoxd9_MA0913.1	0	1	-	8.32301137036169	7.375277646951231	GCAATAAATA
chr1	109825591	109825592	chr1:109825592:A:G	rs77396675	A	G	G	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr1	109825607	109825608	chr1:109825608:C:T	rs521093	C	T	C	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr1	109832462	109832463	chr1:109832463:G:A	rs531157	G	A	A	Hoxd9_MA0913.1	20	0	-	0	0	.
chr1	109832500	109832501	chr1:109832501:A:T	rs543637	A	T	T	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr1	109872272	109872273	chr1:109872273:C:T	rs77271825	C	T	C	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr1	109986861	109986862	chr1:109986862:A:G	rs9429768	A	G	A	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr1	110114909	110114910	chr1:110114910:G:A	rs2168144	G	A	G	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr1	110261312	110261313	chr1:110261313:C:T	rs12146055	C	T	C	Hoxd9_MA0913.1	1	1	+	9.801341972390743	9.453206344661718	GCAATAAAAA
chr1	110435804	110435805	chr1:110435805:G:A	rs12563285	G	A	G	Hoxd9_MA0913.1	18	0	-	0	0	.
chr1	110614468	110614469	chr1:110614469:T:G	rs145030535	T	G	T	Hoxd9_MA0913.1	16	0	-	0	0	.
chr1	110786443	110786444	chr1:110786444:C:G	rs343807	C	G	C	Hoxd9_MA0913.1	28	0	-	0	0	.
chr1	111084762	111084763	chr1:111084763:C:T	rs923613832	C	T	C	Hoxd9_MA0913.1	15	0	-	0	0	.
chr1	111135436	111135437	chr1:111135437:T:C	rs325932	T	C	T	Hoxd9_MA0913.1	10	0	-	0	0	.
chr1	111191101	111191102	chr1:111191102:G:C	rs10857859	G	C	G	Hoxd9_MA0913.1	20	0	-	0	0	.
chr1	111243389	111243390	chr1:111243390:T:A	rs1056831	T	A	T	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr1	111399894	111399895	chr1:111399895:A:T	rs184261612	A	T	A	Hoxd9_MA0913.1	29	0	-	0	0	.
chr1	111405391	111405392	chr1:111405392:A:C	rs7543384	A	C	C	Hoxd9_MA0913.1	23	0	-	0	0	.
chr1	111656232	111656233	chr1:111656233:T:G	rs201533434	T	G	T	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr1	111709838	111709839	chr1:111709839:G:A	rs480578	G	A	a	Hoxd9_MA0913.1	17	0	-	0	0	.
chr1	111744325	111744326	chr1:111744326:G:C	rs881249	G	C	C	Hoxd9_MA0913.1	11	0	+	0	0	.
chr1	112179416	112179417	chr1:112179417:G:T	rs4839216	G	T	G	Hoxd9_MA0913.1	0	1	+	8.2283733949328	5.191230698979931	GCAATAAAGA
chr1	112465598	112465599	chr1:112465599:G:T	rs1175646	G	T	G	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr1	112838102	112838103	chr1:112838103:T:C	rs12083699	T	C	t	Hoxd9_MA0913.1	18	0	-	0	0	.
chr1	112955248	112955249	chr1:112955249:G:C	rs147009502	G	C	G	Hoxd9_MA0913.1	18	0	+	0	0	.
chr1	112964629	112964630	chr1:112964630:G:A	rs72683454	G	A	G	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr1	113036164	113036165	chr1:113036165:T:C	rs11584535	T	C	C	Hoxd9_MA0913.1	3	1	-	8.635860738282448	6.8082417977873435	GCCATAAAAT
chr1	113185543	113185544	chr1:113185544:A:G	rs1228266	A	G	A	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr1	113197828	113197829	chr1:113197829:T:C	rs145448732	T	C	T	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr1	113214559	113214560	chr1:113214560:G:T	rs1216906	G	T	G	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr1	113242710	113242711	chr1:113242711:T:A	rs61820068	T	A	T	Hoxd9_MA0913.1	1	1	+	8.531537147691377	6.459854399395143	GTCATAAAAA
chr1	113458670	113458671	chr1:113458671:A:C	rs182174923	A	C	A	Hoxd9_MA0913.1	28	0	-	0	0	.
chr1	113663533	113663534	chr1:113663534:G:C	rs373487616	G	C	G	Hoxd9_MA0913.1	21	0	-	0	0	.
chr1	114094430	114094431	chr1:114094431:A:G	rs903526945	A	G	A	Hoxd9_MA0913.1	17	0	+	0	0	.
chr1	114298054	114298055	chr1:114298055:C:A	rs17032664	C	A	C	Hoxd9_MA0913.1	10	0	+	0	0	.
chr1	114324877	114324878	chr1:114324878:C:A	rs77973362	C	A	C	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr1	114374234	114374235	chr1:114374235:A:T	rs116387417	A	T	A	Hoxd9_MA0913.1	2	1	+	8.568625789732518	2.1182817578817374	ACAATTAAAT
chr1	114979609	114979610	chr1:114979610:A:G	rs180718176	A	G	A	Hoxd9_MA0913.1	6	1	+	7.973723031895638	1.1583023641162984	GCAGTAAAAA
chr1	114997104	114997105	chr1:114997105:A:G	rs58658580	A	G	a	Hoxd9_MA0913.1	23	0	+	0	0	.
chr1	115135751	115135752	chr1:115135752:C:A	rs1977304	C	A	C	Hoxd9_MA0913.1	19	0	-	0	0	.
chr1	115278024	115278025	chr1:115278025:A:T	rs111971442	A	T	A	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr1	115746152	115746153	chr1:115746153:G:A	rs10737732	G	A	A	Hoxd9_MA0913.1	24	0	-	0	0	.
chr1	115811175	115811176	chr1:115811176:C:T	rs542398914	C	T	C	Hoxd9_MA0913.1	29	0	-	0	0	.
chr1	115899338	115899339	chr1:115899339:A:G	rs815104	A	G	A	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr1	115969272	115969273	chr1:115969273:A:T	rs10733105	A	T	A	Hoxd9_MA0913.1	6	1	+	9.412035922551908	6.988715975017923	GTAATTAAAA
chr1	116178944	116178945	chr1:116178945:A:G	rs7540424	A	G	A	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr1	116286079	116286080	chr1:116286080:A:G	rs740153	A	G	G	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr1	116290415	116290416	chr1:116290416:A:C	rs973140	A	C	A	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr1	116773011	116773012	chr1:116773012:C:T	rs138475570	C	T	C	Hoxd9_MA0913.1	11	0	-	0	0	.
chr1	116855201	116855202	chr1:116855202:A:C	rs112179483	A	C	A	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr1	116882693	116882694	chr1:116882694:C:A	rs79945502	C	A	C	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr1	117138908	117138909	chr1:117138909:T:G	rs114645363	T	G	T	Hoxd9_MA0913.1	20	0	-	0	0	.
chr1	117166041	117166042	chr1:117166042:T:C	rs1892410	T	C	T	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr1	117284949	117284950	chr1:117284950:T:G	rs12133420	T	G	G	Hoxd9_MA0913.1	9	1	+	9.168223885413955	7.945542581782417	GTAATTAAAT
chr1	117612480	117612481	chr1:117612481:T:C	rs34039852	T	C	T	Hoxd9_MA0913.1	5	1	+	8.812437826870472	5.418806477610913	ACAATTAAAA
chr1	117615984	117615985	chr1:117615985:A:G	rs1657820	A	G	G	Hoxd9_MA0913.1	4	1	-	7.3720090125411	4.07987476076612	GCCATTAAAG
chr1	117615991	117615992	chr1:117615992:T:C	rs1775828	T	C	C	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr1	117690459	117690460	chr1:117690460:A:T	rs10923389	A	T	T	Hoxd9_MA0913.1	27	0	-	0	0	.
chr1	117810790	117810791	chr1:117810791:C:T	rs150085863	C	T	C	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr1	117842733	117842734	chr1:117842734:G:A	rs1162514805	G	A	G	Hoxd9_MA0913.1	19	0	-	0	0	.
chr1	117925015	117925016	chr1:117925016:G:A	rs2208375	G	A	A	Hoxd9_MA0913.1	18	0	+	0	0	.
chr1	118327619	118327620	chr1:118327620:A:G	rs10923545	A	G	G	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr1	118650618	118650619	chr1:118650619:G:A	rs2145789	G	A	G	Hoxd9_MA0913.1	25	0	-	0	0	.
chr1	118929076	118929077	chr1:118929077:G:A	rs1031923505	G	A	G	Hoxd9_MA0913.1	15	0	-	0	0	.
chr1	119170006	119170007	chr1:119170007:A:G	rs11484959	A	G	A	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr1	119318836	119318837	chr1:119318837:C:A	rs725247	C	A	A	Hoxd9_MA0913.1	20	0	+	0	0	.
chr1	119330736	119330737	chr1:119330737:G:A	rs587677627	G	A	G	Hoxd9_MA0913.1	10	0	+	0	0	.
chr1	119410152	119410153	chr1:119410153:T:C	rs12141041	T	C	.	Hoxd9_MA0913.1	16	0	+	0	0	.
chr1	119594821	119594822	chr1:119594822:A:G	rs10494227	A	G	A	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr1	119659651	119659652	chr1:119659652:A:G	rs113188994	A	G	A	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr1	119784831	119784832	chr1:119784832:T:G	rs6689072	T	G	T	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr1	124397544	124397545	chr1:124397545:C:G	rs1185094246	C	G	.	Hoxd9_MA0913.1	15	0	+	0	0	.
chr1	146399494	146399495	chr1:146399495:A:T	rs1199604999	A	T	N	Hoxd9_MA0913.1	13	0	-	0	0	.
chr1	146671183	146671184	chr1:146671184:G:A	rs880001358	G	A	G	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr1	146915646	146915647	chr1:146915647:C:T	rs782261577	C	T	T	Hoxd9_MA0913.1	24	0	-	0	0	.
chr1	147174187	147174188	chr1:147174188:C:T	rs72708511	C	T	C	Hoxd9_MA0913.1	11	0	-	0	0	.
chr1	147246220	147246221	chr1:147246221:C:T	rs12093458	C	T	T	Hoxd9_MA0913.1	24	0	-	0	0	.
chr1	147377891	147377892	chr1:147377892:G:A	rs1806617	G	A	G	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr1	148189310	148189311	chr1:148189311:G:T	rs1487450200	G	T	.	Hoxd9_MA0913.1	13	0	+	0	0	.
chr1	148318587	148318588	chr1:148318588:T:C	rs3009397	T	C	.	Hoxd9_MA0913.1	0	1	-	8.853608248980283	9.801341972390743	ACAATAAAAA
chr1	150152765	150152766	chr1:150152766:T:A	rs74124332	T	A	T	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr1	150152765	150152766	chr1:150152766:T:C	chr1:150152766:T:C	T	C	T	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr1	150464806	150464807	chr1:150464807:G:C	rs73019028	G	C	G	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr1	150516603	150516604	chr1:150516604:A:G	rs146194589	A	G	A	Hoxd9_MA0913.1	22	0	+	0	0	.
chr1	150628807	150628808	chr1:150628808:A:G	rs587757890	A	G	A	Hoxd9_MA0913.1	10	0	-	0	0	.
chr1	150753572	150753573	chr1:150753573:C:T	rs12757280	C	T	C	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr1	150925447	150925448	chr1:150925448:G:C	rs80000146	G	C	G	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr1	151910509	151910510	chr1:151910510:C:T	rs1045817205	C	T	C	Hoxd9_MA0913.1	1	1	+	8.079199333223738	7.731063705494713	GCAATAAATT
chr1	151989959	151989960	chr1:151989960:T:C	rs74501641	T	C	T	Hoxd9_MA0913.1	7	1	-	8.568625789732518	1.729481312378176	ACAATTAAAT
chr1	152577541	152577542	chr1:152577542:T:G	rs4085613	T	G	T	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr1	153671093	153671094	chr1:153671094:A:G	rs116110657	A	G	A	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr1	153872996	153872997	chr1:153872997:A:T	rs61804837	A	T	A	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr1	154353996	154353997	chr1:154353997:G:A	rs1889312	G	A	A	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr1	154536863	154536864	chr1:154536864:T:C	rs60368585	T	C	T	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr1	154609025	154609026	chr1:154609026:G:A	rs374491889	G	A	G	Hoxd9_MA0913.1	29	0	+	0	0	.
chr1	154619724	154619725	chr1:154619725:T:C	rs9426829	T	C	T	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr1	154766302	154766303	chr1:154766303:G:A	rs12134335	G	A	G	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr1	154791537	154791538	chr1:154791538:G:A	rs116839037	G	A	G	Hoxd9_MA0913.1	15	0	+	0	0	.
chr1	154940927	154940928	chr1:154940928:C:G	rs6686873	C	G	C	Hoxd9_MA0913.1	24	0	+	0	0	.
chr1	155159196	155159197	chr1:155159197:A:G	rs4276913	A	G	A	Hoxd9_MA0913.1	7	1	+	7.760507910628393	0.921363433274049	GCAATTAACA
chr1	155159209	155159210	chr1:155159210:C:A	rs72704106	C	A	C	Hoxd9_MA0913.1	20	0	+	0	0	.
chr1	155882331	155882332	chr1:155882332:C:T	rs729022	C	T	C	Hoxd9_MA0913.1	18	0	-	0	0	.
chr1	156126017	156126018	chr1:156126018:C:A	rs2485672	C	A	A	Hoxd9_MA0913.1	1	1	+	8.812437826870472	6.392619450845213	ACAATTAAAA
chr1	156189425	156189426	chr1:156189426:G:A	rs2842864	G	A	A	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr1	156399473	156399474	chr1:156399474:A:G	rs4661040	A	G	G	Hoxd9_MA0913.1	8	1	+	7.3720090125411	5.799040435083157	GCCATTAAAG
chr1	156424207	156424208	chr1:156424208:G:A	rs7548323	G	A	A	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr1	156457205	156457206	chr1:156457206:C:T	rs146098027	C	T	C	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr1	156671744	156671745	chr1:156671745:C:T	rs951781	C	T	C	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr1	156689912	156689913	chr1:156689913:A:G	rs370407831	A	G	A	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr1	156828932	156828933	chr1:156828933:C:T	rs6689750	C	T	T	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr1	157139181	157139182	chr1:157139182:C:G	rs1467661	C	G	C	Hoxd9_MA0913.1	12	0	+	0	0	.
chr1	157227906	157227907	chr1:157227907:C:T	rs6681926	C	T	c	Hoxd9_MA0913.1	27	0	-	0	0	.
chr1	157227914	157227915	chr1:157227915:A:C	rs6694423	A	C	N	Hoxd9_MA0913.1	19	0	-	0	0	.
chr1	157363597	157363598	chr1:157363598:T:C	rs116086787	T	C	t	Hoxd9_MA0913.1	12	0	-	0	0	.
chr1	157519516	157519517	chr1:157519517:G:A	rs3811033	G	A	G	Hoxd9_MA0913.1	0	1	+	8.281840948251881	7.334107224841421	GCAATTAATA
chr1	157628863	157628864	chr1:157628864:G:A	rs2758636	G	A	A	Hoxd9_MA0913.1	0	1	+	9.209394307523764	8.261660584113304	GTAATAAAAT
chr1	158438454	158438455	chr1:158438455:T:C	rs6675399	T	C	T	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr1	158951773	158951774	chr1:158951774:G:C	rs72704932	G	C	G	Hoxd9_MA0913.1	22	0	-	0	0	.
chr1	159077142	159077143	chr1:159077143:C:A	rs79577873	C	A	A	Hoxd9_MA0913.1	26	0	-	0	0	.
chr1	159077147	159077148	chr1:159077148:G:A	rs116289675	G	A	G	Hoxd9_MA0913.1	21	0	-	0	0	.
chr1	159077636	159077637	chr1:159077637:C:T	rs149588603	C	T	C	Hoxd9_MA0913.1	13	0	-	0	0	.
chr1	159505815	159505816	chr1:159505816:T:C	rs11265215	T	C	T	Hoxd9_MA0913.1	10	0	+	0	0	.
chr1	159598274	159598275	chr1:159598275:C:T	rs535595222	C	T	C	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr1	159598301	159598302	chr1:159598302:G:A	rs79041193	G	A	G	Hoxd9_MA0913.1	15	0	+	0	0	.
chr1	159743765	159743766	chr1:159743766:T:C	rs11265265	T	C	C	Hoxd9_MA0913.1	4	1	+	8.853608248980283	5.561473997205303	ACAATAAAAA
chr1	159753730	159753731	chr1:159753731:A:G	rs4656849	A	G	G	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr1	159776088	159776089	chr1:159776089:T:C	rs4074173	T	C	T	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr1	159799605	159799606	chr1:159799606:G:C	rs58024147	G	C	C	Hoxd9_MA0913.1	25	0	+	0	0	.
chr1	159836331	159836332	chr1:159836332:C:G	rs193268418	C	G	C	Hoxd9_MA0913.1	26	0	-	0	0	.
chr1	159951508	159951509	chr1:159951509:G:A	rs184005867	G	A	G	Hoxd9_MA0913.1	10	0	-	0	0	.
chr1	159997122	159997123	chr1:159997123:C:T	rs12138182	C	T	T	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr1	160149987	160149988	chr1:160149988:C:T	rs11265333	C	T	C	Hoxd9_MA0913.1	21	0	+	0	0	.
chr1	160450132	160450133	chr1:160450133:G:A	rs6683105	G	A	G	Hoxd9_MA0913.1	10	0	-	0	0	.
chr1	160630278	160630279	chr1:160630279:G:A	rs56184622	G	A	G	Hoxd9_MA0913.1	21	0	+	0	0	.
chr1	160632729	160632730	chr1:160632730:C:A	rs4656921	C	A	T	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr1	160643298	160643299	chr1:160643299:C:T	rs60130645	C	T	C	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr1	160844968	160844969	chr1:160844969:C:T	rs536906	C	T	T	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr1	161185601	161185602	chr1:161185602:G:A	rs4575098	G	A	G	Hoxd9_MA0913.1	10	0	+	0	0	.
chr1	161715448	161715449	chr1:161715449:G:A	rs12406801	G	A	g	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr1	161733644	161733645	chr1:161733645:G:A	rs61801184	G	A	A	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr1	161743292	161743293	chr1:161743293:G:T	rs114023433	G	T	G	Hoxd9_MA0913.1	12	0	-	0	0	.
chr1	162064863	162064864	chr1:162064864:C:T	chr1:162064864:C:T	C	T	C	Hoxd9_MA0913.1	21	0	-	0	0	.
chr1	162310223	162310224	chr1:162310224:T:G	rs2819317	T	G	G	Hoxd9_MA0913.1	21	0	+	0	0	.
chr1	162381663	162381664	chr1:162381664:A:G	rs12407972	A	G	A	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr1	162381664	162381665	chr1:162381665:G:T	rs1984871	G	T	G	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr1	162690878	162690879	chr1:162690879:C:T	rs569320505	C	T	C	Hoxd9_MA0913.1	22	0	-	0	0	.
chr1	163055437	163055438	chr1:163055438:G:A	rs1507754	G	A	G	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr1	163162151	163162152	chr1:163162152:G:C	rs368489124	G	C	G	Hoxd9_MA0913.1	24	0	-	0	0	.
chr1	163211875	163211876	chr1:163211876:C:T	rs35792769	C	T	C	Hoxd9_MA0913.1	19	0	+	0	0	.
chr1	163298376	163298377	chr1:163298377:G:A	rs1533027	G	A	G	Hoxd9_MA0913.1	21	0	-	0	0	.
chr1	163359107	163359108	chr1:163359108:A:G	rs16852991	A	G	G	Hoxd9_MA0913.1	17	0	-	0	0	.
chr1	163436512	163436513	chr1:163436513:T:C	rs60661855	T	C	T	Hoxd9_MA0913.1	7	1	-	8.853608248980283	2.01446377162594	ACAATAAAAA
chr1	164380644	164380645	chr1:164380645:T:C	rs569319	T	C	T	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr1	164380659	164380660	chr1:164380660:C:T	rs520941	C	T	C	Hoxd9_MA0913.1	13	0	+	0	0	.
chr1	164560334	164560335	chr1:164560335:T:G	rs75789929	T	G	T	Hoxd9_MA0913.1	8	1	-	7.973723031895638	5.974059392243097	GCAGTAAAAA
chr1	164563853	164563854	chr1:164563854:G:T	rs12040395	G	T	G	Hoxd9_MA0913.1	1	1	-	9.55752993525279	7.13771155922753	GCAATAAAAT
chr1	164666037	164666038	chr1:164666038:C:T	rs2635036	C	T	C	Hoxd9_MA0913.1	25	0	+	0	0	.
chr1	164712275	164712276	chr1:164712276:C:T	rs928601103	C	T	C	Hoxd9_MA0913.1	19	0	+	0	0	.
chr1	164886119	164886120	chr1:164886120:C:A	rs1768329	C	A	A	Hoxd9_MA0913.1	25	0	-	0	0	.
chr1	164953366	164953367	chr1:164953367:C:T	rs1936091	C	T	C	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr1	165048712	165048713	chr1:165048713:G:A	rs186959016	G	A	G	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr1	165054748	165054749	chr1:165054749:T:C	rs1494416	T	C	C	Hoxd9_MA0913.1	22	0	-	0	0	.
chr1	165235715	165235716	chr1:165235716:G:A	rs572948863	G	A	G	Hoxd9_MA0913.1	27	0	-	0	0	.
chr1	165526886	165526887	chr1:165526887:A:G	rs72692041	A	G	A	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr1	165630110	165630111	chr1:165630111:A:C	rs78552360	A	C	A	Hoxd9_MA0913.1	3	1	+	8.323343304007485	3.85711263360743	CCAATAAAAA
chr1	165686866	165686867	chr1:165686867:C:T	rs7546215	C	T	C	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr1	165927015	165927016	chr1:165927016:C:T	rs7514248	C	T	C	Hoxd9_MA0913.1	29	0	-	0	0	.
chr1	166469693	166469694	chr1:166469694:C:T	rs1494425	C	T	T	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr1	166478465	166478466	chr1:166478466:C:T	rs1027352	C	T	C	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr1	166976834	166976835	chr1:166976835:T:C	rs6699159	T	C	C	Hoxd9_MA0913.1	12	0	-	0	0	.
chr1	167166693	167166694	chr1:167166694:C:T	rs80066459	C	T	C	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr1	167166703	167166704	chr1:167166704:A:T	rs4075646	A	T	A	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr1	167288210	167288211	chr1:167288211:C:T	rs141150410	C	T	C	Hoxd9_MA0913.1	14	0	-	0	0	.
chr1	167371379	167371380	chr1:167371380:C:T	rs75895426	C	T	C	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr1	167465039	167465040	chr1:167465040:T:C	rs2995091	T	C	T	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr1	167675673	167675674	chr1:167675674:G:A	rs7551114	G	A	G	Hoxd9_MA0913.1	29	0	-	0	0	.
chr1	167722817	167722818	chr1:167722818:A:G	rs147284960	A	G	A	Hoxd9_MA0913.1	3	1	+	8.323343304007485	6.495724363512382	CCAATAAAAA
chr1	167792498	167792499	chr1:167792499:G:C	rs115541635	G	C	g	Hoxd9_MA0913.1	21	0	-	0	0	.
chr1	167792510	167792511	chr1:167792511:C:A	rs78652687	C	A	C	Hoxd9_MA0913.1	9	1	-	7.4131794346509094	8.635860738282448	GCCATAAAAG
chr1	167792524	167792525	chr1:167792525:T:G	rs114790755	T	G	T	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr1	167898879	167898880	chr1:167898880:T:C	rs34191598	T	C	T	Hoxd9_MA0913.1	6	1	-	8.812437826870472	1.9970171590911319	ACAATTAAAA
chr1	167957964	167957965	chr1:167957965:C:T	rs77066357	C	T	C	Hoxd9_MA0913.1	20	0	-	0	0	.
chr1	168304138	168304139	chr1:168304139:G:A	rs1114120	G	A	G	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr1	168429534	168429535	chr1:168429535:G:A	rs1108157	G	A	A	Hoxd9_MA0913.1	14	0	-	0	0	.
chr1	168618738	168618739	chr1:168618739:G:A	rs2143306	G	A	G	Hoxd9_MA0913.1	0	1	+	9.168223885413955	8.220490162003495	GTAATTAAAT
chr1	168664146	168664147	chr1:168664147:T:C	rs35175427	T	C	T	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr1	168706956	168706957	chr1:168706957:C:T	rs531953	C	T	C	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr1	168756475	168756476	chr1:168756476:G:A	rs6697889	G	A	A	Hoxd9_MA0913.1	27	0	-	0	0	.
chr1	168894649	168894650	chr1:168894650:A:G	rs74123028	A	G	G	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr1	168920741	168920742	chr1:168920742:C:A	rs190340769	C	A	C	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr1	168920747	168920748	chr1:168920748:T:C	rs7541615	T	C	C	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr1	169104002	169104003	chr1:169104003:C:T	rs10919059	C	T	C	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr1	169298352	169298353	chr1:169298353:C:T	rs12031371	C	T	C	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr1	169309471	169309472	chr1:169309472:A:C	rs139954582	A	C	A	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr1	169363659	169363660	chr1:169363660:T:C	rs17349579	T	C	T	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr1	169436930	169436931	chr1:169436931:T:G	rs12143708	T	G	T	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr1	169539337	169539338	chr1:169539338:A:C	rs1557572	A	C	C	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr1	169596154	169596155	chr1:169596155:C:A	rs3917811	C	A	A	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr1	169999090	169999091	chr1:169999091:C:T	rs139451933	C	T	C	Hoxd9_MA0913.1	8	1	+	7.801678332738202	8.32301137036169	GCAATAAACA
chr1	170146900	170146901	chr1:170146901:C:T	rs579438	C	T	C	Hoxd9_MA0913.1	25	0	+	0	0	.
chr1	170253410	170253411	chr1:170253411:A:G	rs12129877	A	G	G	Hoxd9_MA0913.1	28	0	-	0	0	.
chr1	170565513	170565514	chr1:170565514:T:G	rs6661527	T	G	t	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr1	170591662	170591663	chr1:170591663:C:T	rs182878443	C	T	C	Hoxd9_MA0913.1	1	1	+	8.187202972822991	7.839067345093966	GCAATTAAGA
chr1	170593424	170593425	chr1:170593425:C:T	rs116080166	C	T	C	Hoxd9_MA0913.1	17	0	-	0	0	.
chr1	170634668	170634669	chr1:170634669:A:G	rs4656792	A	G	A	Hoxd9_MA0913.1	14	0	-	0	0	.
chr1	170662621	170662622	chr1:170662622:T:C	rs629234	T	C	C	Hoxd9_MA0913.1	16	0	-	0	0	.
chr1	170726293	170726294	chr1:170726294:C:G	rs750047066	C	G	C	Hoxd9_MA0913.1	19	0	+	0	0	.
chr1	170861828	170861829	chr1:170861829:G:C	rs10489234	G	C	G	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr1	171038571	171038572	chr1:171038572:A:T	rs72710589	A	T	A	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr1	171139696	171139697	chr1:171139697:C:T	rs2235193	C	T	T	Hoxd9_MA0913.1	28	0	-	0	0	.
chr1	171245569	171245570	chr1:171245570:T:C	chr1:171245570:T:C	T	C	T	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr1	171265948	171265949	chr1:171265949:A:T	rs6674596	A	T	T	Hoxd9_MA0913.1	12	0	-	0	0	.
chr1	171723170	171723171	chr1:171723171:C:T	rs6669263	C	T	C	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr1	171848294	171848295	chr1:171848295:A:C	rs6425454	A	C	A	Hoxd9_MA0913.1	14	0	-	0	0	.
chr1	172186083	172186084	chr1:172186084:T:C	rs499106	T	C	T	Hoxd9_MA0913.1	16	0	+	0	0	.
chr1	172218262	172218263	chr1:172218263:G:A	rs912300	G	A	G	Hoxd9_MA0913.1	26	0	+	0	0	.
chr1	172325456	172325457	chr1:172325457:A:C	rs41481754	A	C	A	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr1	172416628	172416629	chr1:172416629:C:T	rs16844423	C	T	C	Hoxd9_MA0913.1	29	0	-	0	0	.
chr1	172534965	172534966	chr1:172534966:T:A	rs12729948	T	A	T	Hoxd9_MA0913.1	14	0	-	0	0	.
chr1	172775402	172775403	chr1:172775403:G:A	rs859723	G	A	A	Hoxd9_MA0913.1	15	0	+	0	0	.
chr1	172883772	172883773	chr1:172883773:A:G	rs6672265	A	G	G	Hoxd9_MA0913.1	8	1	+	8.323343304007485	6.750374726549543	CCAATAAAAA
chr1	172914586	172914587	chr1:172914587:G:A	rs113922700	G	A	G	Hoxd9_MA0913.1	14	0	-	0	0	.
chr1	172957158	172957159	chr1:172957159:C:T	rs7539951	C	T	C	Hoxd9_MA0913.1	10	0	+	0	0	.
chr1	173181356	173181357	chr1:173181357:A:G	rs11806687	A	G	A	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr1	173425106	173425107	chr1:173425107:T:C	rs4462186	T	C	C	Hoxd9_MA0913.1	17	0	-	0	0	.
chr1	173429752	173429753	chr1:173429753:T:C	rs79998187	T	C	T	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr1	173518784	173518785	chr1:173518785:G:T	rs12080722	G	T	T	Hoxd9_MA0913.1	11	0	-	0	0	.
chr1	174217857	174217858	chr1:174217858:C:T	rs139520689	C	T	C	Hoxd9_MA0913.1	16	0	-	0	0	.
chr1	174217882	174217883	chr1:174217883:A:G	rs55773127	A	G	A	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr1	174497578	174497579	chr1:174497579:A:G	rs74126815	A	G	A	Hoxd9_MA0913.1	18	0	-	0	0	.
chr1	174550526	174550527	chr1:174550527:A:G	rs72715237	A	G	A	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr1	174641319	174641320	chr1:174641320:C:T	rs2760058	C	T	C	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr1	174796375	174796376	chr1:174796376:G:A	rs76607799	G	A	g	Hoxd9_MA0913.1	26	0	+	0	0	.
chr1	174815513	174815514	chr1:174815514:A:G	rs72717617	A	G	A	Hoxd9_MA0913.1	9	1	-	9.168223885413955	8.329997507299597	GTAATTAAAT
chr1	175169465	175169466	chr1:175169466:G:A	rs10912901	G	A	G	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr1	175181987	175181988	chr1:175181988:T:C	rs2142507	T	C	C	Hoxd9_MA0913.1	20	0	-	0	0	.
chr1	175197926	175197927	chr1:175197927:C:G	rs1049624199	C	G	C	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr1	175360575	175360576	chr1:175360576:A:T	rs6413828	A	T	A	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr1	175471114	175471115	chr1:175471115:A:G	rs79767642	A	G	A	Hoxd9_MA0913.1	9	1	+	8.32301137036169	6.856518029592199	GCAATAAATA
chr1	175471115	175471116	chr1:175471116:C:A	rs61808381	C	A	C	Hoxd9_MA0913.1	10	0	+	0	0	.
chr1	175734242	175734243	chr1:175734243:A:C	rs6698561	A	C	C	Hoxd9_MA0913.1	23	0	-	0	0	.
chr1	175854287	175854288	chr1:175854288:C:A	rs511539	C	A	C	Hoxd9_MA0913.1	17	0	+	0	0	.
chr1	176141910	176141911	chr1:176141911:G:C	rs12033997	G	C	G	Hoxd9_MA0913.1	1	1	-	8.812437826870472	5.719872814585759	ACAATTAAAA
chr1	176195728	176195729	chr1:176195729:T:C	rs12755507	T	C	T	Hoxd9_MA0913.1	28	0	+	0	0	.
chr1	176205654	176205655	chr1:176205655:T:C	rs2039230	T	C	C	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr1	176517598	176517599	chr1:176517599:T:C	rs183900587	T	C	T	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr1	176518563	176518564	chr1:176518564:A:C	rs10489473	A	C	A	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr1	176522540	176522541	chr1:176522541:C:T	rs11801416	C	T	T	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr1	176843279	176843280	chr1:176843280:G:A	rs12137658	G	A	G	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr1	176931701	176931702	chr1:176931702:T:C	rs17379085	T	C	T	Hoxd9_MA0913.1	15	0	+	0	0	.
chr1	176996490	176996491	chr1:176996491:G:A	rs554362318	G	A	G	Hoxd9_MA0913.1	28	0	-	0	0	.
chr1	177074943	177074944	chr1:177074944:T:G	rs6678743	T	G	T	Hoxd9_MA0913.1	24	0	+	0	0	.
chr1	177902719	177902720	chr1:177902720:C:T	rs916926687	C	T	C	Hoxd9_MA0913.1	27	0	-	0	0	.
chr1	177902750	177902751	chr1:177902751:T:C	rs623130	T	C	C	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr1	177933346	177933347	chr1:177933347:G:A	rs3813648	G	A	G	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr1	178023266	178023267	chr1:178023267:T:C	rs11585914	T	C	T	Hoxd9_MA0913.1	7	1	-	7.75646393805828	0.9173194607039366	GCCATTAAAC
chr1	178344875	178344876	chr1:178344876:C:T	rs111872061	C	T	T	Hoxd9_MA0913.1	18	0	-	0	0	.
chr1	179143177	179143178	chr1:179143178:A:G	rs79732318	A	G	A	Hoxd9_MA0913.1	8	1	+	8.079531266869532	6.506562689411589	CCAATAAAAT
chr1	179440826	179440827	chr1:179440827:G:A	rs115463657	G	A	g	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr1	179690189	179690190	chr1:179690190:T:G	rs12139382	T	G	T	Hoxd9_MA0913.1	27	0	-	0	0	.
chr1	180098778	180098779	chr1:180098779:G:A	rs12121834	G	A	A	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr1	180155966	180155967	chr1:180155967:A:G	rs76221792	A	G	A	Hoxd9_MA0913.1	22	0	-	0	0	.
chr1	180155997	180155998	chr1:180155998:G:T	rs72710691	G	T	G	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr1	180169338	180169339	chr1:180169339:G:A	rs12071932	G	A	G	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr1	180170651	180170652	chr1:180170652:G:A	rs4651059	G	A	A	Hoxd9_MA0913.1	12	0	-	0	0	.
chr1	180289340	180289341	chr1:180289341:T:A	rs114099959	T	A	T	Hoxd9_MA0913.1	4	1	+	7.801678332738202	5.114426908552044	GCAATAAACA
chr1	180404761	180404762	chr1:180404762:G:A	rs72714861	G	A	G	Hoxd9_MA0913.1	17	0	-	0	0	.
chr1	180444741	180444742	chr1:180444742:G:A	rs112354803	G	A	G	Hoxd9_MA0913.1	28	0	+	0	0	.
chr1	180837097	180837098	chr1:180837098:C:T	rs76590838	C	T	C	Hoxd9_MA0913.1	2	1	-	8.082713108822833	9.760171550280933	GCGATTAAAA
chr1	181212756	181212757	chr1:181212757:G:T	rs17375332	G	T	T	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr1	181799848	181799849	chr1:181799849:G:A	rs638132	G	A	G	Hoxd9_MA0913.1	12	0	+	0	0	.
chr1	182200929	182200930	chr1:182200930:T:C	rs79449762	T	C	T	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr1	182292562	182292563	chr1:182292563:A:T	rs4543750	A	T	T	Hoxd9_MA0913.1	11	0	-	0	0	.
chr1	182300159	182300160	chr1:182300160:C:A	rs559498073	C	A	C	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr1	182853668	182853669	chr1:182853669:A:G	rs139323481	A	G	A	Hoxd9_MA0913.1	28	0	+	0	0	.
chr1	182928070	182928071	chr1:182928071:A:G	rs75224980	A	G	A	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr1	183043287	183043288	chr1:183043288:A:G	rs10911206	A	G	G	Hoxd9_MA0913.1	27	0	+	0	0	.
chr1	183164381	183164382	chr1:183164382:T:C	rs1276378415	T	C	T	Hoxd9_MA0913.1	22	0	-	0	0	.
chr1	183174438	183174439	chr1:183174439:G:C	rs75177051	G	C	G	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr1	183236433	183236434	chr1:183236434:C:T	rs3738822	C	T	C	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr1	183555719	183555720	chr1:183555720:C:A	rs796860	C	A	A	Hoxd9_MA0913.1	18	0	-	0	0	.
chr1	183571962	183571963	chr1:183571963:C:T	rs6667363	C	T	C	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr1	183603350	183603351	chr1:183603351:T:C	rs10081971	T	C	T	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr1	183603352	183603353	chr1:183603353:G:A	chr1:183603353:G:A	G	A	G	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr1	183689831	183689832	chr1:183689832:C:T	rs191255444	C	T	C	Hoxd9_MA0913.1	11	0	+	0	0	.
chr1	183694720	183694721	chr1:183694721:G:A	rs12068757	G	A	G	Hoxd9_MA0913.1	27	0	-	0	0	.
chr1	183734778	183734779	chr1:183734779:A:G	rs145593548	A	G	C	Hoxd9_MA0913.1	2	1	+	9.801341972390743	8.123883530932645	GCAATAAAAA
chr1	184016510	184016511	chr1:184016511:A:G	rs77829233	A	G	A	Hoxd9_MA0913.1	28	0	+	0	0	.
chr1	184060858	184060859	chr1:184060859:C:T	rs17572231	C	T	C	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr1	184398407	184398408	chr1:184398408:A:G	rs12070712	A	G	G	Hoxd9_MA0913.1	11	0	-	0	0	.
chr1	184398408	184398409	chr1:184398409:C:T	rs59237100	C	T	C	Hoxd9_MA0913.1	10	0	-	0	0	.
chr1	184419456	184419457	chr1:184419457:T:C	rs74131668	T	C	T	Hoxd9_MA0913.1	16	0	+	0	0	.
chr1	184569337	184569338	chr1:184569338:C:T	rs6669940	C	T	C	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr1	184793038	184793039	chr1:184793039:C:T	rs16823470	C	T	C	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr1	184861326	184861327	chr1:184861327:A:G	rs533043675	A	G	A	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr1	184911237	184911238	chr1:184911238:A:G	rs7520051	A	G	A	Hoxd9_MA0913.1	13	0	+	0	0	.
chr1	185062880	185062881	chr1:185062881:T:G	rs115757443	T	G	T	Hoxd9_MA0913.1	4	1	+	8.282172881897674	4.9900386301226956	CCAATTAAAA
chr1	185267379	185267380	chr1:185267380:G:A	rs1889976	G	A	A	Hoxd9_MA0913.1	0	1	+	9.168223885413955	8.220490162003495	GTAATTAAAT
chr1	185377318	185377319	chr1:185377319:A:C	rs11802271	A	C	A	Hoxd9_MA0913.1	12	0	+	0	0	.
chr1	185405436	185405437	chr1:185405437:G:A	rs4650680	G	A	G	Hoxd9_MA0913.1	24	0	-	0	0	.
chr1	185530288	185530289	chr1:185530289:C:A	rs924823	C	A	C	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr1	185608633	185608634	chr1:185608634:A:G	rs146296919	A	G	A	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr1	185646371	185646372	chr1:185646372:A:G	rs565422282	A	G	A	Hoxd9_MA0913.1	25	0	-	0	0	.
chr1	185646404	185646405	chr1:185646405:G:A	rs192293972	G	A	G	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr1	186153398	186153399	chr1:186153399:A:C	rs10911835	A	C	A	Hoxd9_MA0913.1	2	1	+	8.32301137036169	7.401342173391351	GCAATAAATA
chr1	186154762	186154763	chr1:186154763:A:C	rs75961079	A	C	A	Hoxd9_MA0913.1	19	0	-	0	0	.
chr1	186156071	186156072	chr1:186156072:C:T	rs59379268	C	T	T	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr1	186184076	186184077	chr1:186184077:C:G	rs144020545	C	G	C	Hoxd9_MA0913.1	0	1	-	9.760171550280933	8.282172881897674	GCAATTAAAA
chr1	186224519	186224520	chr1:186224520:A:G	rs606144	A	G	G	Hoxd9_MA0913.1	4	1	-	7.7299109947576845	4.437776742982706	GCAGTAAAAT
chr1	186678476	186678477	chr1:186678477:A:G	rs20428	A	G	A	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr1	186713742	186713743	chr1:186713743:T:C	rs12401885	T	C	C	Hoxd9_MA0913.1	2	1	-	8.187202972822991	6.509744531364891	GCAATTAAGA
chr1	186722802	186722803	chr1:186722803:A:G	rs115526832	A	G	A	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr1	186864496	186864497	chr1:186864497:T:C	rs77191125	T	C	T	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr1	186943922	186943923	chr1:186943923:T:G	rs6668908	T	G	G	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr1	187224018	187224019	chr1:187224019:G:C	rs55657357	G	C	G	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr1	187315367	187315368	chr1:187315368:C:T	rs12040350	C	T	T	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr1	187566425	187566426	chr1:187566426:C:T	rs10494601	C	T	C	Hoxd9_MA0913.1	12	0	+	0	0	.
chr1	187689124	187689125	chr1:187689125:T:G	rs3127496	T	G	T	Hoxd9_MA0913.1	3	1	-	8.082713108822833	3.616482438422778	GCGATTAAAA
chr1	187689125	187689126	chr1:187689126:C:A	rs3127497	C	A	C	Hoxd9_MA0913.1	2	1	-	8.082713108822833	3.30982751843015	GCGATTAAAA
chr1	188367913	188367914	chr1:188367914:T:C	rs151243358	T	C	T	Hoxd9_MA0913.1	20	0	-	0	0	.
chr1	188402910	188402911	chr1:188402911:T:C	rs10912369	T	C	C	Hoxd9_MA0913.1	23	0	+	0	0	.
chr1	189138876	189138877	chr1:189138877:T:C	rs10754056	T	C	C	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr1	189657688	189657689	chr1:189657689:A:G	rs513328	A	G	G	Hoxd9_MA0913.1	26	0	+	0	0	.
chr1	189658704	189658705	chr1:189658705:G:A	rs1259805978	G	A	G	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr1	189658729	189658730	chr1:189658730:A:G	rs482865	A	G	A	Hoxd9_MA0913.1	18	0	+	0	0	.
chr1	189955134	189955135	chr1:189955135:G:A	rs6663130	G	A	G	Hoxd9_MA0913.1	20	0	-	0	0	.
chr1	189983478	189983479	chr1:189983479:T:C	rs10920249	T	C	t	Hoxd9_MA0913.1	4	1	+	8.32301137036169	5.030877118586712	GCAATAAATA
chr1	190243418	190243419	chr1:190243419:T:G	rs192450961	T	G	T	Hoxd9_MA0913.1	23	0	+	0	0	.
chr1	190577800	190577801	chr1:190577801:A:G	rs11582878	A	G	A	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr1	190686189	190686190	chr1:190686190:C:T	rs10920773	C	T	C	Hoxd9_MA0913.1	16	0	-	0	0	.
chr1	191155042	191155043	chr1:191155043:G:A	rs10920900	G	A	A	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr1	191346287	191346288	chr1:191346288:C:T	rs1246720	C	T	T	Hoxd9_MA0913.1	9	1	+	7.7976343601680895	8.635860738282448	GCCATAAAAC
chr1	191556282	191556283	chr1:191556283:T:C	rs654053	T	C	T	Hoxd9_MA0913.1	12	0	-	0	0	.
chr1	191561496	191561497	chr1:191561497:C:T	rs12568770	C	T	C	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr1	191970291	191970292	chr1:191970292:C:T	rs184202442	C	T	C	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr1	192445291	192445292	chr1:192445292:A:G	rs6704162	A	G	A	Hoxd9_MA0913.1	27	0	+	0	0	.
chr1	192575968	192575969	chr1:192575969:G:A	rs7535818	G	A	G	Hoxd9_MA0913.1	14	0	-	0	0	.
chr1	192575979	192575980	chr1:192575980:T:C	rs80272816	T	C	T	Hoxd9_MA0913.1	3	1	-	7.3720090125411	5.544390072045995	GCCATTAAAG
chr1	192626245	192626246	chr1:192626246:A:T	rs78068007	A	T	A	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr1	192634526	192634527	chr1:192634527:G:T	rs3795618	G	T	T	Hoxd9_MA0913.1	12	0	-	0	0	.
chr1	192678768	192678769	chr1:192678769:G:T	rs2208960	G	T	t	Hoxd9_MA0913.1	15	0	-	0	0	.
chr1	192724865	192724866	chr1:192724866:C:A	chr1:192724866:C:A	C	A	C	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr1	192761374	192761375	chr1:192761375:T:C	rs1933701	T	C	C	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr1	192761416	192761417	chr1:192761417:T:C	rs1933702	T	C	T	Hoxd9_MA0913.1	22	0	+	0	0	.
chr1	192851948	192851949	chr1:192851949:G:A	rs1231737	G	A	A	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr1	192916350	192916351	chr1:192916351:A:G	rs7514366	A	G	A	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr1	193568913	193568914	chr1:193568914:T:C	rs16835542	T	C	T	Hoxd9_MA0913.1	12	0	+	0	0	.
chr1	194042704	194042705	chr1:194042705:G:A	rs12731751	G	A	G	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr1	194063140	194063141	chr1:194063141:G:A	rs1442423	G	A	A	Hoxd9_MA0913.1	0	1	+	8.287725110553424	7.3399913871429625	GTCATAAAAT
chr1	194433930	194433931	chr1:194433931:A:G	rs12401747	A	G	A	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr1	194821090	194821091	chr1:194821091:T:C	rs117289115	T	C	T	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr1	194832172	194832173	chr1:194832173:T:C	rs139106295	T	C	T	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr1	194914410	194914411	chr1:194914411:T:A	rs564324	T	A	T	Hoxd9_MA0913.1	4	1	+	8.60979621184233	5.9225447876561725	ACAATAAAAT
chr1	194978118	194978119	chr1:194978119:C:T	rs12037113	C	T	C	Hoxd9_MA0913.1	21	0	-	0	0	.
chr1	195107814	195107815	chr1:195107815:T:C	rs12748075	T	C	T	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr1	195107815	195107816	chr1:195107816:G:T	rs12723151	G	T	G	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr1	195849100	195849101	chr1:195849101:T:C	rs10801473	T	C	C	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr1	196373313	196373314	chr1:196373314:A:G	rs73067629	A	G	A	Hoxd9_MA0913.1	19	0	+	0	0	.
chr1	197126709	197126710	chr1:197126710:G:A	rs10754216	G	A	g	Hoxd9_MA0913.1	22	0	+	0	0	.
chr1	197183858	197183859	chr1:197183859:A:G	rs7520503	A	G	A	Hoxd9_MA0913.1	9	1	+	8.531537147691377	7.065043806921886	GTCATAAAAA
chr1	197269718	197269719	chr1:197269719:C:G	rs489839	C	G	G	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr1	197559198	197559199	chr1:197559199:T:C	rs6682689	T	C	T	Hoxd9_MA0913.1	21	0	-	0	0	.
chr1	198018578	198018579	chr1:198018579:A:G	rs9660817	A	G	A	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr1	198079573	198079574	chr1:198079574:A:G	rs72749406	A	G	A	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr1	198168802	198168803	chr1:198168803:A:G	rs1892487	A	G	A	Hoxd9_MA0913.1	3	1	+	8.812437826870472	6.984818886375368	ACAATTAAAA
chr1	198231843	198231844	chr1:198231844:T:G	rs6657318	T	G	T	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr1	198231945	198231946	chr1:198231946:G:A	rs56888849	G	A	G	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr1	198234474	198234475	chr1:198234475:T:C	rs7522204	T	C	C	Hoxd9_MA0913.1	17	0	+	0	0	.
chr1	198245058	198245059	chr1:198245059:C:A	rs3886269	C	A	C	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr1	198260026	198260027	chr1:198260027:G:T	rs12731191	G	T	G	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr1	198449774	198449775	chr1:198449775:G:A	rs12045126	G	A	A	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr1	198927981	198927982	chr1:198927982:G:A	rs4445501	G	A	G	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr1	199159047	199159048	chr1:199159048:T:C	rs12563199	T	C	T	Hoxd9_MA0913.1	1	1	+	9.453206344661718	9.801341972390743	GTAATAAAAA
chr1	199199780	199199781	chr1:199199781:G:A	rs111885911	G	A	A	Hoxd9_MA0913.1	29	0	-	0	0	.
chr1	199307708	199307709	chr1:199307709:C:T	rs4915353	C	T	C	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr1	199411269	199411270	chr1:199411270:G:A	rs658449	G	A	A	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr1	199821573	199821574	chr1:199821574:T:C	rs9661058	T	C	T	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr1	199878224	199878225	chr1:199878225:T:G	rs16845646	T	G	T	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr1	199878909	199878910	chr1:199878910:A:T	rs12062514	A	T	A	Hoxd9_MA0913.1	15	0	+	0	0	.
chr1	200034676	200034677	chr1:200034677:C:T	rs543979589	C	T	C	Hoxd9_MA0913.1	16	0	+	0	0	.
chr1	200100072	200100073	chr1:200100073:T:C	rs2816993	T	C	C	Hoxd9_MA0913.1	5	1	-	9.453206344661718	3.2315431917658497	GTAATAAAAA
chr1	200100087	200100088	chr1:200100088:A:G	rs2816992	A	G	A	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr1	200336552	200336553	chr1:200336553:C:T	rs76569075	C	T	C	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr1	200483875	200483876	chr1:200483876:G:A	rs10919944	G	A	G	Hoxd9_MA0913.1	9	1	-	8.371167929409406	9.209394307523764	GTAATAAAAC
chr1	200674393	200674394	chr1:200674394:A:G	rs4320808	A	G	G	Hoxd9_MA0913.1	27	0	-	0	0	.
chr1	200726928	200726929	chr1:200726929:C:T	rs114846561	C	T	C	Hoxd9_MA0913.1	18	0	-	0	0	.
chr1	200771948	200771949	chr1:200771949:C:T	rs10800733	C	T	C	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr1	200775405	200775406	chr1:200775406:T:A	rs12093247	T	A	A	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr1	200838117	200838118	chr1:200838118:A:G	rs12758336	A	G	A	Hoxd9_MA0913.1	14	0	-	0	0	.
chr1	200838125	200838126	chr1:200838126:T:G	rs79869095	T	G	T	Hoxd9_MA0913.1	6	1	-	9.412035922551908	4.937459059883702	GTAATTAAAA
chr1	200852329	200852330	chr1:200852330:A:G	rs563223105	A	G	A	Hoxd9_MA0913.1	8	1	+	9.168223885413955	7.595255307956012	GTAATTAAAT
chr1	200936743	200936744	chr1:200936744:T:A	rs167199	T	A	T	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr1	200936758	200936759	chr1:200936759:A:G	rs7525822	A	G	A	Hoxd9_MA0913.1	14	0	+	0	0	.
chr1	201149648	201149649	chr1:201149649:G:T	rs80209962	G	T	G	Hoxd9_MA0913.1	19	0	+	0	0	.
chr1	201228038	201228039	chr1:201228039:A:T	rs184961497	A	T	A	Hoxd9_MA0913.1	20	0	+	0	0	.
chr1	201457808	201457809	chr1:201457809:A:G	rs76048431	A	G	A	Hoxd9_MA0913.1	4	1	-	7.932552609785828	4.64041835801085	GCAGTTAAAA
chr1	201505356	201505357	chr1:201505357:A:G	rs78433503	A	G	A	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr1	201527675	201527676	chr1:201527676:T:C	rs2184458	T	C	C	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr1	201719826	201719827	chr1:201719827:A:G	rs67146338	A	G	A	Hoxd9_MA0913.1	3	1	+	8.323343304007485	6.495724363512382	CCAATAAAAA
chr1	201721834	201721835	chr1:201721835:C:T	rs551359924	C	T	C	Hoxd9_MA0913.1	26	0	+	0	0	.
chr1	201913148	201913149	chr1:201913149:G:C	rs2644120	G	C	C	Hoxd9_MA0913.1	1	1	-	8.60979621184233	5.517231199557616	ACAATAAAAT
chr1	202016602	202016603	chr1:202016603:G:A	rs1130193	G	A	A	Hoxd9_MA0913.1	29	0	-	0	0	.
chr1	202035227	202035228	chr1:202035228:A:G	rs116756971	A	G	A	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr1	202129686	202129687	chr1:202129687:T:C	rs190657896	T	C	T	Hoxd9_MA0913.1	8	1	-	7.7976343601680895	6.224665782710147	GCCATAAAAC
chr1	202289988	202289989	chr1:202289989:A:G	rs187970821	A	G	A	Hoxd9_MA0913.1	24	0	-	0	0	.
chr1	202919818	202919819	chr1:202919819:T:C	rs3182429	T	C	T	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr1	203062642	203062643	chr1:203062643:T:C	rs112656610	T	C	t	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr1	203290230	203290231	chr1:203290231:T:G	rs7516656	T	G	T	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr1	203444316	203444317	chr1:203444317:C:G	rs79158296	C	G	C	Hoxd9_MA0913.1	12	0	-	0	0	.
chr1	203531771	203531772	chr1:203531772:T:C	rs4531342	T	C	t	Hoxd9_MA0913.1	16	0	-	0	0	.
chr1	203544473	203544474	chr1:203544474:G:C	rs4258271	G	C	C	Hoxd9_MA0913.1	16	0	+	0	0	.
chr1	203582048	203582049	chr1:203582049:A:C	rs6681579	A	C	A	Hoxd9_MA0913.1	24	0	-	0	0	.
chr1	203582075	203582076	chr1:203582076:G:A	rs536577557	G	A	G	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr1	203590676	203590677	chr1:203590677:T:C	rs77621370	T	C	T	Hoxd9_MA0913.1	3	1	-	7.801678332738202	5.974059392243097	GCAATAAACA
chr1	203938156	203938157	chr1:203938157:C:A	rs75007234	C	A	C	Hoxd9_MA0913.1	0	1	-	9.453206344661718	6.416063648708848	GTAATAAAAA
chr1	203985968	203985969	chr1:203985969:G:C	rs7552512	G	C	C	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr1	204045564	204045565	chr1:204045565:T:C	rs12133665	T	C	T	Hoxd9_MA0913.1	12	0	+	0	0	.
chr1	204255743	204255744	chr1:204255744:A:C	chr1:204255744:A:C	A	C	A	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr1	204398174	204398175	chr1:204398175:A:G	rs11240738	A	G	A	Hoxd9_MA0913.1	27	0	+	0	0	.
chr1	204555345	204555346	chr1:204555346:G:T	rs12116645	G	T	G	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr1	204570210	204570211	chr1:204570211:T:C	rs76320602	T	C	T	Hoxd9_MA0913.1	20	0	-	0	0	.
chr1	204743373	204743374	chr1:204743374:G:A	rs4951108	G	A	G	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr1	205001366	205001367	chr1:205001367:C:A	rs4951152	C	A	A	Hoxd9_MA0913.1	12	0	+	0	0	.
chr1	205180461	205180462	chr1:205180462:C:T	rs10900460	C	T	C	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr1	205193928	205193929	chr1:205193929:A:G	rs10900468	A	G	A	Hoxd9_MA0913.1	8	1	+	7.7976343601680895	6.224665782710147	GCCATAAAAC
chr1	205354442	205354443	chr1:205354443:A:T	rs143689606	A	T	A	Hoxd9_MA0913.1	4	1	-	7.801678332738202	5.114426908552044	GCAATAAACA
chr1	205599084	205599085	chr1:205599085:C:T	rs2282449	C	T	c	Hoxd9_MA0913.1	16	0	-	0	0	.
chr1	205599087	205599088	chr1:205599088:G:A	rs41308411	G	A	G	Hoxd9_MA0913.1	13	0	-	0	0	.
chr1	205647720	205647721	chr1:205647721:G:A	rs2153903	G	A	G	Hoxd9_MA0913.1	14	0	+	0	0	.
chr1	205774534	205774535	chr1:205774535:A:C	rs708724	A	C	A	Hoxd9_MA0913.1	2	1	+	7.801678332738202	6.88000913576786	GCAATAAACA
chr1	206522397	206522398	chr1:206522398:G:A	rs12405921	G	A	A	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr1	206562362	206562363	chr1:206562363:C:G	rs1007802	C	G	G	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr1	206784844	206784845	chr1:206784845:G:T	rs12563100	G	T	G	Hoxd9_MA0913.1	21	0	+	0	0	.
chr1	206810019	206810020	chr1:206810020:T:C	rs10863860	T	C	C	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr1	206865340	206865341	chr1:206865341:C:T	rs1400986	C	T	C	Hoxd9_MA0913.1	24	0	+	0	0	.
chr1	207405218	207405219	chr1:207405219:C:T	rs56310041	C	T	C	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr1	207499642	207499643	chr1:207499643:G:C	rs59179545	G	C	G	Hoxd9_MA0913.1	17	0	+	0	0	.
chr1	207579204	207579205	chr1:207579205:T:G	rs601356	T	G	g	Hoxd9_MA0913.1	3	1	-	8.594690316172638	4.1284596457725815	GCCATTAAAT
chr1	207737971	207737972	chr1:207737972:A:T	chr1:207737972:A:T	A	T	A	Hoxd9_MA0913.1	7	1	+	9.412035922551908	6.118189170833476	GTAATTAAAA
chr1	207838000	207838001	chr1:207838001:C:G	rs2745974	C	G	G	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr1	207991094	207991095	chr1:207991095:G:A	rs544172	G	A	G	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr1	208268555	208268556	chr1:208268556:C:G	rs12024029	C	G	C	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr1	208338005	208338006	chr1:208338006:A:C	rs1499577	A	C	C	Hoxd9_MA0913.1	13	0	+	0	0	.
chr1	208388007	208388008	chr1:208388008:T:C	rs2163039	T	C	T	Hoxd9_MA0913.1	2	1	-	8.719303557138431	7.041845115680332	GCAATAAAAC
chr1	208404854	208404855	chr1:208404855:G:A	rs710417	G	A	G	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr1	209040338	209040339	chr1:209040339:G:A	rs908234307	G	A	G	Hoxd9_MA0913.1	28	0	-	0	0	.
chr1	209072513	209072514	chr1:209072514:T:G	rs10494916	T	G	T	Hoxd9_MA0913.1	20	0	+	0	0	.
chr1	209387328	209387329	chr1:209387329:A:T	rs184822094	A	T	A	Hoxd9_MA0913.1	6	1	+	8.838502353310592	6.415182405776607	GCCATTAAAA
chr1	209455570	209455571	chr1:209455571:T:C	rs4844831	T	C	C	Hoxd9_MA0913.1	20	0	+	0	0	.
chr1	209473013	209473014	chr1:209473014:T:C	rs2206115	T	C	C	Hoxd9_MA0913.1	26	0	-	0	0	.
chr1	209548815	209548816	chr1:209548816:C:T	rs10436972	C	T	T	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr1	209548839	209548840	chr1:209548840:A:G	rs60843894	A	G	A	Hoxd9_MA0913.1	8	1	+	8.079531266869532	6.506562689411589	CCAATAAAAT
chr1	209553727	209553728	chr1:209553728:A:G	rs76605465	A	G	A	Hoxd9_MA0913.1	20	0	+	0	0	.
chr1	209826444	209826445	chr1:209826445:G:A	rs3753513	G	A	G	Hoxd9_MA0913.1	20	0	-	0	0	.
chr1	209827702	209827703	chr1:209827703:A:C	rs660975	A	C	A	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr1	209877410	209877411	chr1:209877411:T:G	rs76610459	T	G	T	Hoxd9_MA0913.1	17	0	+	0	0	.
chr1	210223446	210223447	chr1:210223447:G:A	rs74156109	G	A	G	Hoxd9_MA0913.1	2	1	-	7.3720090125411	1.8433341776606584	GCCATTAAAG
chr1	210264987	210264988	chr1:210264988:G:A	rs115526327	G	A	G	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr1	210343276	210343277	chr1:210343277:T:C	rs184744728	T	C	T	Hoxd9_MA0913.1	27	0	+	0	0	.
chr1	210647825	210647826	chr1:210647826:C:A	rs114550224	C	A	C	Hoxd9_MA0913.1	26	0	-	0	0	.
chr1	210765874	210765875	chr1:210765875:G:A	rs12142954	G	A	G	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr1	210765923	210765924	chr1:210765924:G:A	rs1770212	G	A	G	Hoxd9_MA0913.1	29	0	+	0	0	.
chr1	210908060	210908061	chr1:210908061:A:G	rs6656271	A	G	A	Hoxd9_MA0913.1	20	0	+	0	0	.
chr1	211576391	211576392	chr1:211576392:G:C	rs3738198	G	C	C	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr1	211610854	211610855	chr1:211610855:C:G	rs10863917	C	G	C	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr1	211610870	211610871	chr1:211610871:T:G	rs12129489	T	G	T	Hoxd9_MA0913.1	4	1	+	8.812437826870472	5.520303575095493	ACAATTAAAA
chr1	211827446	211827447	chr1:211827447:C:A	rs12120603	C	A	C	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr1	211831424	211831425	chr1:211831425:C:T	chr1:211831425:C:T	C	T	C	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr1	212248286	212248287	chr1:212248287:A:G	rs351385	A	G	G	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr1	212290670	212290671	chr1:212290671:T:G	rs35556190	T	G	T	Hoxd9_MA0913.1	8	1	-	9.209394307523764	7.209730667871224	GTAATAAAAT
chr1	212491700	212491701	chr1:212491701:C:T	rs79182305	C	T	C	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr1	212529380	212529381	chr1:212529381:G:C	rs6659881	G	C	C	Hoxd9_MA0913.1	18	0	-	0	0	.
chr1	212624547	212624548	chr1:212624548:A:G	rs7533306	A	G	G	Hoxd9_MA0913.1	3	1	+	9.412035922551908	7.584416982056805	GTAATTAAAA
chr1	212636233	212636234	chr1:212636234:G:A	rs72756379	G	A	G	Hoxd9_MA0913.1	24	0	-	0	0	.
chr1	212636263	212636264	chr1:212636264:C:T	rs3123536	C	T	C	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr1	212816765	212816766	chr1:212816766:T:A	rs6540767	T	A	A	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr1	212823082	212823083	chr1:212823083:T:G	rs10864001	T	G	T	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr1	212920398	212920399	chr1:212920399:C:T	rs3816954	C	T	C	Hoxd9_MA0913.1	19	0	-	0	0	.
chr1	212920423	212920424	chr1:212920424:G:T	rs1284863	G	T	C	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr1	213583111	213583112	chr1:213583112:G:A	rs12060988	G	A	G	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr1	214030170	214030171	chr1:214030171:G:A	rs115557097	G	A	G	Hoxd9_MA0913.1	1	1	-	9.55752993525279	9.209394307523764	GCAATAAAAT
chr1	214106387	214106388	chr1:214106388:C:T	rs1223744	C	T	T	Hoxd9_MA0913.1	15	0	+	0	0	.
chr1	214229715	214229716	chr1:214229716:T:C	rs1498362	T	C	T	Hoxd9_MA0913.1	9	1	-	8.082713108822833	6.616219768053342	GCGATTAAAA
chr1	214494979	214494980	chr1:214494980:A:G	rs116475946	A	G	A	Hoxd9_MA0913.1	7	1	+	8.60979621184233	1.7706517344879864	ACAATAAAAT
chr1	214531801	214531802	chr1:214531802:T:C	rs74458419	T	C	T	Hoxd9_MA0913.1	24	0	+	0	0	.
chr1	214637830	214637831	chr1:214637831:G:A	rs2280049	G	A	G	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr1	214715037	214715038	chr1:214715038:T:C	rs335554	T	C	T	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr1	215417164	215417165	chr1:215417165:G:C	rs7530039	G	C	C	Hoxd9_MA0913.1	21	0	+	0	0	.
chr1	215819065	215819066	chr1:215819066:A:G	rs10495006	A	G	A	Hoxd9_MA0913.1	9	1	+	8.879672775420401	7.4131794346509094	GCCATAAAAA
chr1	215891555	215891556	chr1:215891556:A:G	rs17025561	A	G	A	Hoxd9_MA0913.1	2	1	+	8.853608248980283	7.176149807522183	ACAATAAAAA
chr1	215963530	215963531	chr1:215963531:C:T	rs571005	C	T	T	Hoxd9_MA0913.1	26	0	+	0	0	.
chr1	216457034	216457035	chr1:216457035:A:C	rs137985705	A	C	A	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr1	216502836	216502837	chr1:216502837:C:T	rs114485137	C	T	C	Hoxd9_MA0913.1	15	0	-	0	0	.
chr1	216617272	216617273	chr1:216617273:T:C	rs560326634	T	C	T	Hoxd9_MA0913.1	13	0	+	0	0	.
chr1	216652102	216652103	chr1:216652103:T:C	rs11572706	T	C	T	Hoxd9_MA0913.1	7	1	-	7.801678332738202	0.9625338553838594	GCAATAAACA
chr1	216723912	216723913	chr1:216723913:T:C	chr1:216723913:T:C	T	C	T	Hoxd9_MA0913.1	26	0	-	0	0	.
chr1	216723951	216723952	chr1:216723952:G:A	rs117079810	G	A	g	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr1	217188954	217188955	chr1:217188955:T:C	rs12143637	T	C	T	Hoxd9_MA0913.1	8	1	-	9.168223885413955	7.595255307956012	GTAATTAAAT
chr1	217427260	217427261	chr1:217427261:T:C	rs3178123	T	C	T	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr1	217812743	217812744	chr1:217812744:A:G	rs150897187	A	G	A	Hoxd9_MA0913.1	22	0	+	0	0	.
chr1	217862224	217862225	chr1:217862225:A:G	rs10779304	A	G	G	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr1	217930227	217930228	chr1:217930228:G:C	rs72732806	G	C	G	Hoxd9_MA0913.1	0	1	+	9.453206344661718	7.97520767627846	GTAATAAAAA
chr1	218139977	218139978	chr1:218139978:T:C	rs61824612	T	C	T	Hoxd9_MA0913.1	3	1	-	8.323343304007485	6.495724363512382	CCAATAAAAA
chr1	218163856	218163857	chr1:218163857:G:A	rs621070	G	A	G	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr1	218163872	218163873	chr1:218163873:G:C	rs192555726	G	C	G	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr1	218391538	218391539	chr1:218391539:C:T	rs947712	C	T	T	Hoxd9_MA0913.1	0	1	-	9.209394307523764	8.261660584113304	GTAATAAAAT
chr1	218601851	218601852	chr1:218601852:G:A	rs2929333	G	A	G	Hoxd9_MA0913.1	11	0	-	0	0	.
chr1	218674078	218674079	chr1:218674079:C:T	rs60991969	C	T	C	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr1	218674774	218674775	chr1:218674775:C:A	rs74914014	C	A	C	Hoxd9_MA0913.1	13	0	+	0	0	.
chr1	218698499	218698500	chr1:218698500:A:C	rs76487443	A	C	A	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr1	218810451	218810452	chr1:218810452:T:C	rs375977968	T	C	T	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr1	218859138	218859139	chr1:218859139:C:G	rs7553911	C	G	C	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr1	219067627	219067628	chr1:219067628:A:G	rs1256603	A	G	G	Hoxd9_MA0913.1	7	1	+	7.7976343601680895	0.9584898828137469	GCCATAAAAC
chr1	219120153	219120154	chr1:219120154:G:A	rs74138160	G	A	G	Hoxd9_MA0913.1	24	0	+	0	0	.
chr1	219120870	219120871	chr1:219120871:C:T	rs552088823	C	T	C	Hoxd9_MA0913.1	16	0	-	0	0	.
chr1	219293884	219293885	chr1:219293885:C:T	rs4846545	C	T	C	Hoxd9_MA0913.1	10	0	+	0	0	.
chr1	219365963	219365964	chr1:219365964:T:C	rs17591794	T	C	C	Hoxd9_MA0913.1	29	0	+	0	0	.
chr1	219517100	219517101	chr1:219517101:A:T	rs77409379	A	T	A	Hoxd9_MA0913.1	11	0	+	0	0	.
chr1	219517112	219517113	chr1:219517113:C:T	rs80327647	C	T	C	Hoxd9_MA0913.1	23	0	+	0	0	.
chr1	219793499	219793500	chr1:219793500:C:T	rs111338364	C	T	c	Hoxd9_MA0913.1	16	0	-	0	0	.
chr1	219963663	219963664	chr1:219963664:G:A	rs10779390	G	A	A	Hoxd9_MA0913.1	10	0	+	0	0	.
chr1	220217506	220217507	chr1:220217507:C:T	rs1007768912	C	T	C	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr1	220551447	220551448	chr1:220551448:C:G	rs2786619	C	G	c	Hoxd9_MA0913.1	16	0	+	0	0	.
chr1	221292689	221292690	chr1:221292690:C:T	rs58846930	C	T	C	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr1	221335818	221335819	chr1:221335819:G:C	rs6685717	G	C	C	Hoxd9_MA0913.1	16	0	+	0	0	.
chr1	221368733	221368734	chr1:221368734:G:A	rs4846714	G	A	G	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr1	221478137	221478138	chr1:221478138:G:A	rs74603453	G	A	G	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr1	221612154	221612155	chr1:221612155:G:A	rs10082031	G	A	G	Hoxd9_MA0913.1	21	0	-	0	0	.
chr1	221788692	221788693	chr1:221788693:C:G	rs116027032	C	G	C	Hoxd9_MA0913.1	0	1	-	9.168223885413955	7.690225217030696	GTAATTAAAT
chr1	221891950	221891951	chr1:221891951:A:C	rs61496468	A	C	A	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr1	221891972	221891973	chr1:221891973:A:G	rs74628451	A	G	A	Hoxd9_MA0913.1	19	0	+	0	0	.
chr1	222006807	222006808	chr1:222006808:T:C	rs17442058	T	C	T	Hoxd9_MA0913.1	11	0	-	0	0	.
chr1	222732951	222732952	chr1:222732952:A:G	rs12043288	A	G	A	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr1	222948371	222948372	chr1:222948372:A:G	rs370516475	A	G	A	Hoxd9_MA0913.1	2	1	+	8.079531266869532	6.402072825411433	CCAATAAAAT
chr1	223050871	223050872	chr1:223050872:G:A	rs4846790	G	A	g	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr1	223275708	223275709	chr1:223275709:A:C	rs61837636	A	C	C	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr1	223410363	223410364	chr1:223410364:T:C	chr1:223410364:T:C	T	C	T	Hoxd9_MA0913.1	25	0	+	0	0	.
chr1	224045569	224045570	chr1:224045570:G:A	rs12040271	G	A	G	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr1	224405177	224405178	chr1:224405178:T:A	rs12731035	T	A	T	Hoxd9_MA0913.1	25	0	-	0	0	.
chr1	224582258	224582259	chr1:224582259:G:A	rs190262247	G	A	G	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr1	224615422	224615423	chr1:224615423:G:A	rs11802812	G	A	G	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr1	224626781	224626782	chr1:224626782:C:T	rs4654059	C	T	C	Hoxd9_MA0913.1	19	0	-	0	0	.
chr1	225223498	225223499	chr1:225223499:C:A	rs675571	C	A	c	Hoxd9_MA0913.1	29	0	+	0	0	.
chr1	225229070	225229071	chr1:225229071:G:T	rs622158	G	T	g	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr1	225361305	225361306	chr1:225361306:T:C	rs16844799	T	C	t	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr1	225361309	225361310	chr1:225361310:C:G	rs6673285	C	G	c	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr1	225487592	225487593	chr1:225487593:T:C	rs56181999	T	C	T	Hoxd9_MA0913.1	4	1	+	8.812437826870472	5.520303575095493	ACAATTAAAA
chr1	225537286	225537287	chr1:225537287:G:T	rs12032961	G	T	G	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr1	225606923	225606924	chr1:225606924:A:G	rs60588592	A	G	A	Hoxd9_MA0913.1	3	1	+	8.079531266869532	6.251912326374428	CCAATAAAAT
chr1	225612258	225612259	chr1:225612259:C:T	rs960172021	C	T	C	Hoxd9_MA0913.1	17	0	+	0	0	.
chr1	225774630	225774631	chr1:225774631:A:G	rs6659660	A	G	G	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr1	225875745	225875746	chr1:225875746:C:A	rs360092	C	A	C	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr1	225928125	225928126	chr1:225928126:C:T	rs78341430	C	T	C	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr1	225987842	225987843	chr1:225987843:T:C	rs3795442	T	C	T	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr1	226089433	226089434	chr1:226089434:C:A	rs76150976	C	A	C	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr1	226490116	226490117	chr1:226490117:G:A	rs17519476	G	A	G	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr1	226654532	226654533	chr1:226654533:C:T	rs3820637	C	T	C	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr1	226947086	226947087	chr1:226947087:A:G	rs190444977	A	G	A	Hoxd9_MA0913.1	13	0	-	0	0	.
chr1	227031612	227031613	chr1:227031613:A:G	rs1319103	A	G	G	Hoxd9_MA0913.1	10	0	+	0	0	.
chr1	227102032	227102033	chr1:227102033:C:G	rs529430	C	G	C	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr1	227102144	227102145	chr1:227102145:A:G	rs117759115	A	G	A	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr1	227268214	227268215	chr1:227268215:A:C	rs3106477	A	C	C	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr1	227299261	227299262	chr1:227299262:T:C	rs115466212	T	C	T	Hoxd9_MA0913.1	3	1	-	8.568625789732518	6.741006849237415	ACAATTAAAT
chr1	227299269	227299270	chr1:227299270:T:C	rs4415529	T	C	T	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr1	227316911	227316912	chr1:227316912:G:C	rs4653822	G	C	C	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr1	227934438	227934439	chr1:227934439:T:C	rs78590291	T	C	T	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr1	228183050	228183051	chr1:228183051:C:T	rs72757812	C	T	N	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr1	228555936	228555937	chr1:228555937:C:G	rs12035781	C	G	C	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr1	228911258	228911259	chr1:228911259:C:A	rs74423728	C	A	C	Hoxd9_MA0913.1	24	0	-	0	0	.
chr1	229120026	229120027	chr1:229120027:T:C	rs6685977	T	C	C	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr1	229203962	229203963	chr1:229203963:T:C	rs41527448	T	C	T	Hoxd9_MA0913.1	11	0	-	0	0	.
chr1	229221785	229221786	chr1:229221786:T:C	rs6688259	T	C	C	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr1	229237585	229237586	chr1:229237586:T:C	rs7513494	T	C	C	Hoxd9_MA0913.1	26	0	+	0	0	.
chr1	229313269	229313270	chr1:229313270:T:G	rs12132466	T	G	T	Hoxd9_MA0913.1	6	1	-	8.60979621184233	4.135219349174124	ACAATAAAAT
chr1	229349987	229349988	chr1:229349988:A:T	rs238106	A	T	A	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr1	229430614	229430615	chr1:229430615:A:G	rs526244	A	G	A	Hoxd9_MA0913.1	5	1	+	8.853608248980283	2.631945096084414	ACAATAAAAA
chr1	229642026	229642027	chr1:229642027:C:A	rs4925503	C	A	A	Hoxd9_MA0913.1	0	1	+	8.282172881897674	8.812437826870472	CCAATTAAAA
chr1	229905336	229905337	chr1:229905337:C:T	rs3853555	C	T	C	Hoxd9_MA0913.1	26	0	+	0	0	.
chr1	229990982	229990983	chr1:229990983:A:G	rs11585757	A	G	A	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr1	230045146	230045147	chr1:230045147:A:G	rs28464281	A	G	A	Hoxd9_MA0913.1	13	0	+	0	0	.
chr1	230140151	230140152	chr1:230140152:G:T	rs115500734	G	T	G	Hoxd9_MA0913.1	16	0	-	0	0	.
chr1	230140168	230140169	chr1:230140169:C:T	rs80203588	C	T	C	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr1	230222631	230222632	chr1:230222632:C:T	rs12030130	C	T	C	Hoxd9_MA0913.1	13	0	-	0	0	.
chr1	230252358	230252359	chr1:230252359:C:T	rs3789632	C	T	C	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr1	230282243	230282244	chr1:230282244:T:C	rs12563115	T	C	T	Hoxd9_MA0913.1	20	0	-	0	0	.
chr1	230282252	230282253	chr1:230282253:C:T	rs9431818	C	T	T	Hoxd9_MA0913.1	11	0	-	0	0	.
chr1	230291711	230291712	chr1:230291712:A:C	rs12030266	A	C	A	Hoxd9_MA0913.1	22	0	-	0	0	.
chr1	230314678	230314679	chr1:230314679:G:A	rs1051819	G	A	G	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr1	230360113	230360114	chr1:230360114:T:C	rs183046897	T	C	T	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr1	230502214	230502215	chr1:230502215:A:G	rs1341972	A	G	A	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr1	230510006	230510007	chr1:230510007:A:T	rs189878039	A	T	A	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr1	230572442	230572443	chr1:230572443:T:A	rs376220724	T	A	t	Hoxd9_MA0913.1	17	0	+	0	0	.
chr1	230621426	230621427	chr1:230621427:A:G	rs78830861	A	G	A	Hoxd9_MA0913.1	2	1	+	9.209394307523764	7.531935866065666	GTAATAAAAT
chr1	230682878	230682879	chr1:230682879:G:A	rs3789653	G	A	G	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr1	230742708	230742709	chr1:230742709:C:G	rs116186135	C	G	C	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr1	230788629	230788630	chr1:230788630:G:A	rs1933633	G	A	G	Hoxd9_MA0913.1	16	0	+	0	0	.
chr1	230919453	230919454	chr1:230919454:T:C	rs113929935	T	C	T	Hoxd9_MA0913.1	16	0	+	0	0	.
chr1	231109956	231109957	chr1:231109957:T:G	rs74441977	T	G	T	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr1	231426745	231426746	chr1:231426746:G:C	rs12757362	G	C	G	Hoxd9_MA0913.1	19	0	-	0	0	.
chr1	231700194	231700195	chr1:231700195:C:A	rs11577035	C	A	C	Hoxd9_MA0913.1	22	0	+	0	0	.
chr1	231850786	231850787	chr1:231850787:T:A	rs12093976	T	A	T	Hoxd9_MA0913.1	21	0	-	0	0	.
chr1	231866713	231866714	chr1:231866714:C:T	rs79778165	C	T	C	Hoxd9_MA0913.1	28	0	+	0	0	.
chr1	232252548	232252549	chr1:232252549:C:T	rs11801690	C	T	C	Hoxd9_MA0913.1	28	0	-	0	0	.
chr1	232384855	232384856	chr1:232384856:C:A	rs12086929	C	A	C	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr1	232628645	232628646	chr1:232628646:G:A	rs59439337	G	A	G	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr1	232678053	232678054	chr1:232678054:T:C	rs7544399	T	C	C	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr1	232795824	232795825	chr1:232795825:C:T	rs2644431	C	T	C	Hoxd9_MA0913.1	17	0	+	0	0	.
chr1	232798534	232798535	chr1:232798535:A:C	rs2814524	A	C	A	Hoxd9_MA0913.1	22	0	-	0	0	.
chr1	232874306	232874307	chr1:232874307:T:C	rs765556	T	C	C	Hoxd9_MA0913.1	18	0	-	0	0	.
chr1	232877309	232877310	chr1:232877310:G:A	rs6668587	G	A	G	Hoxd9_MA0913.1	2	1	-	8.531537147691377	3.002862312810936	GTCATAAAAA
chr1	233241842	233241843	chr1:233241843:A:G	rs11809254	A	G	A	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr1	233243300	233243301	chr1:233243301:A:G	rs114638553	A	G	A	Hoxd9_MA0913.1	4	1	-	7.75646393805828	4.4643296862833	GCCATTAAAC
chr1	233513934	233513935	chr1:233513935:A:T	rs142377491	A	T	A	Hoxd9_MA0913.1	27	0	-	0	0	.
chr1	233605522	233605523	chr1:233605523:T:C	rs1693219	T	C	C	Hoxd9_MA0913.1	15	0	-	0	0	.
chr1	233680210	233680211	chr1:233680211:A:G	rs112296971	A	G	A	Hoxd9_MA0913.1	2	1	+	8.568625789732518	6.89116734827442	ACAATTAAAT
chr1	233959119	233959120	chr1:233959120:A:G	rs10910315	A	G	A	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr1	233994045	233994046	chr1:233994046:G:A	rs10910324	G	A	A	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr1	234135600	234135601	chr1:234135601:T:C	rs1463502	T	C	t	Hoxd9_MA0913.1	28	0	-	0	0	.
chr1	234262569	234262570	chr1:234262570:C:G	rs10752780	C	G	C	Hoxd9_MA0913.1	0	1	-	9.453206344661718	7.97520767627846	GTAATAAAAA
chr1	234295269	234295270	chr1:234295270:A:G	rs79537472	A	G	A	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr1	234326475	234326476	chr1:234326476:A:C	rs61824469	A	C	A	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr1	234558736	234558737	chr1:234558737:C:T	rs2884425	C	T	T	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr1	234566854	234566855	chr1:234566855:G:A	rs72767226	G	A	G	Hoxd9_MA0913.1	16	0	-	0	0	.
chr1	234641346	234641347	chr1:234641347:G:A	rs487770	G	A	G	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr1	234715824	234715825	chr1:234715825:A:G	rs1012763049	A	G	A	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr1	234823496	234823497	chr1:234823497:T:A	rs822839	T	A	T	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr1	234866579	234866580	chr1:234866580:C:T	rs562099089	C	T	C	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr1	234929822	234929823	chr1:234929823:A:G	rs2802935	A	G	G	Hoxd9_MA0913.1	2	1	+	7.973723031895638	6.29626459043754	GCAGTAAAAA
chr1	235094732	235094733	chr1:235094733:G:C	rs12144743	G	C	G	Hoxd9_MA0913.1	14	0	-	0	0	.
chr1	235125573	235125574	chr1:235125574:A:C	rs7547668	A	C	A	Hoxd9_MA0913.1	16	0	-	0	0	.
chr1	235416596	235416597	chr1:235416597:T:A	rs2131920	T	A	t	Hoxd9_MA0913.1	6	1	-	8.282172881897674	5.858852934363689	CCAATTAAAA
chr1	235430866	235430867	chr1:235430867:A:G	rs2291687	A	G	G	Hoxd9_MA0913.1	26	0	+	0	0	.
chr1	235634223	235634224	chr1:235634224:A:C	rs4074378	A	C	A	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr1	235645869	235645870	chr1:235645870:G:A	rs1891978	G	A	G	Hoxd9_MA0913.1	1	1	-	7.8800714937946905	7.531935866065666	GCGATAAAAT
chr1	235901895	235901896	chr1:235901896:A:G	rs72763464	A	G	A	Hoxd9_MA0913.1	19	0	-	0	0	.
chr1	235989293	235989294	chr1:235989294:C:T	rs116696005	C	T	C	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr1	236015305	236015306	chr1:236015306:G:A	rs9662380	G	A	A	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr1	236017279	236017280	chr1:236017280:C:G	rs3768081	C	G	C	Hoxd9_MA0913.1	19	0	-	0	0	.
chr1	236132778	236132779	chr1:236132779:A:G	rs6689258	A	G	A	Hoxd9_MA0913.1	14	0	+	0	0	.
chr1	236356150	236356151	chr1:236356151:A:G	rs1726673	A	G	G	Hoxd9_MA0913.1	9	1	-	8.635860738282448	7.7976343601680895	GCCATAAAAT
chr1	236494586	236494587	chr1:236494587:C:G	rs4659456	C	G	C	Hoxd9_MA0913.1	20	0	-	0	0	.
chr1	236604139	236604140	chr1:236604140:A:C	rs908385570	A	C	A	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr1	236906983	236906984	chr1:236906984:C:T	rs74146664	C	T	C	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr1	237172123	237172124	chr1:237172124:T:G	rs1008956	T	G	T	Hoxd9_MA0913.1	5	1	+	9.168223885413955	2.9877311546278964	GTAATTAAAT
chr1	237198227	237198228	chr1:237198228:C:T	rs7526053	C	T	C	Hoxd9_MA0913.1	26	0	-	0	0	.
chr1	237411994	237411995	chr1:237411995:T:C	rs4465196	T	C	T	Hoxd9_MA0913.1	7	1	-	8.60979621184233	1.7706517344879864	ACAATAAAAT
chr1	238312801	238312802	chr1:238312802:C:T	rs12142622	C	T	C	Hoxd9_MA0913.1	10	0	+	0	0	.
chr1	238312810	238312811	chr1:238312811:A:G	rs9658894	A	G	G	Hoxd9_MA0913.1	19	0	+	0	0	.
chr1	238601824	238601825	chr1:238601825:G:C	rs12093712	G	C	A	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr1	238806795	238806796	chr1:238806796:T:C	rs12096431	T	C	C	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr1	239035261	239035262	chr1:239035262:G:A	rs12034964	G	A	G	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr1	239171170	239171171	chr1:239171171:A:G	rs12082609	A	G	A	Hoxd9_MA0913.1	23	0	+	0	0	.
chr1	239282536	239282537	chr1:239282537:A:G	rs4659907	A	G	G	Hoxd9_MA0913.1	10	0	-	0	0	.
chr1	239508172	239508173	chr1:239508173:T:C	rs6675823	T	C	T	Hoxd9_MA0913.1	26	0	+	0	0	.
chr1	239611710	239611711	chr1:239611711:A:G	rs147267673	A	G	A	Hoxd9_MA0913.1	28	0	-	0	0	.
chr1	239780226	239780227	chr1:239780227:G:A	rs1578176	G	A	A	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr1	239952110	239952111	chr1:239952111:G:A	rs183003156	G	A	g	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr1	239952116	239952117	chr1:239952117:G:T	rs10926027	G	T	g	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr1	240043526	240043527	chr1:240043527:C:T	rs12096705	C	T	C	Hoxd9_MA0913.1	25	0	+	0	0	.
chr1	240054395	240054396	chr1:240054396:C:G	rs75280320	C	G	C	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr1	240107479	240107480	chr1:240107480:T:C	rs545084915	T	C	T	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr1	240115869	240115870	chr1:240115870:A:G	rs76704718	A	G	A	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr1	240134801	240134802	chr1:240134802:C:T	rs117582153	C	T	C	Hoxd9_MA0913.1	21	0	-	0	0	.
chr1	240134813	240134814	chr1:240134814:A:T	rs574794383	A	T	A	Hoxd9_MA0913.1	9	1	-	7.7299109947576845	7.973723031895638	GCAGTAAAAT
chr1	240149472	240149473	chr1:240149473:A:G	rs930838111	A	G	A	Hoxd9_MA0913.1	9	1	-	9.55752993525279	8.719303557138431	GCAATAAAAT
chr1	240423394	240423395	chr1:240423395:C:T	rs1414660	C	T	T	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr1	240499355	240499356	chr1:240499356:A:G	rs114496574	A	G	A	Hoxd9_MA0913.1	20	0	-	0	0	.
chr1	240499389	240499390	chr1:240499390:T:C	rs10926284	T	C	T	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr1	240510498	240510499	chr1:240510499:T:C	rs35060706	T	C	T	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr1	240583067	240583068	chr1:240583068:A:G	rs141211254	A	G	A	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr1	240905551	240905552	chr1:240905552:T:C	rs390488	T	C	C	Hoxd9_MA0913.1	13	0	-	0	0	.
chr1	241234354	241234355	chr1:241234355:T:C	rs2815852	T	C	C	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr1	241236703	241236704	chr1:241236704:C:T	rs2686240	C	T	C	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr1	241605314	241605315	chr1:241605315:T:C	rs616593	T	C	T	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr1	241605327	241605328	chr1:241605328:A:G	rs646355	A	G	A	Hoxd9_MA0913.1	6	1	+	7.7299109947576845	0.9144903269783449	GCAGTAAAAT
chr1	241605346	241605347	chr1:241605347:C:T	rs2050511	C	T	C	Hoxd9_MA0913.1	25	0	+	0	0	.
chr1	241849357	241849358	chr1:241849358:C:T	rs2073490	C	T	C	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr1	241950488	241950489	chr1:241950489:G:A	rs141413259	G	A	G	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr1	241950495	241950496	chr1:241950496:C:T	rs28438742	C	T	C	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr1	242242948	242242949	chr1:242242949:A:T	rs10926667	A	T	A	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr1	242283338	242283339	chr1:242283339:T:C	rs114886996	T	C	t	Hoxd9_MA0913.1	17	0	+	0	0	.
chr1	242376462	242376463	chr1:242376463:T:A	rs72763077	T	A	T	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr1	242426353	242426354	chr1:242426354:G:T	rs2654872	G	T	T	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr1	242525511	242525512	chr1:242525512:T:A	rs868769	T	A	A	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr1	242811796	242811797	chr1:242811797:G:A	rs2809880	G	A	A	Hoxd9_MA0913.1	19	0	-	0	0	.
chr1	243445664	243445665	chr1:243445665:A:G	rs6703335	A	G	A	Hoxd9_MA0913.1	11	0	-	0	0	.
chr1	244291529	244291530	chr1:244291530:A:G	rs528322	A	G	A	Hoxd9_MA0913.1	2	1	+	8.2283733949328	6.550914953474702	GCAATAAAGA
chr1	244435983	244435984	chr1:244435984:G:A	rs79005146	G	A	G	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr1	244964337	244964338	chr1:244964338:A:G	chr1:244964338:A:G	A	G	A	Hoxd9_MA0913.1	6	1	+	8.568625789732518	1.7532051219531783	ACAATTAAAT
chr1	245028993	245028994	chr1:245028994:T:C	rs545679	T	C	C	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr1	245062689	245062690	chr1:245062690:T:C	rs672289	T	C	T	Hoxd9_MA0913.1	3	1	-	8.323343304007485	6.495724363512382	CCAATAAAAA
chr1	245256009	245256010	chr1:245256010:A:G	rs907015	A	G	A	Hoxd9_MA0913.1	26	0	-	0	0	.
chr1	245256026	245256027	chr1:245256027:T:C	rs907016	T	C	C	Hoxd9_MA0913.1	9	1	-	8.323343304007485	6.856849963237993	CCAATAAAAA
chr1	245268000	245268001	chr1:245268001:G:A	rs12026894	G	A	G	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr1	245313818	245313819	chr1:245313819:A:G	rs11811491	A	G	a	Hoxd9_MA0913.1	15	0	+	0	0	.
chr1	245412359	245412360	chr1:245412360:A:G	rs593881	A	G	G	Hoxd9_MA0913.1	13	0	+	0	0	.
chr1	245513375	245513376	chr1:245513376:A:C	rs112527467	A	C	A	Hoxd9_MA0913.1	10	0	+	0	0	.
chr1	245567210	245567211	chr1:245567211:G:A	rs113934048	G	A	G	Hoxd9_MA0913.1	17	0	+	0	0	.
chr1	245604671	245604672	chr1:245604672:G:C	rs1771525	G	C	G	Hoxd9_MA0913.1	22	0	-	0	0	.
chr1	245952442	245952443	chr1:245952443:A:G	rs10802303	A	G	A	Hoxd9_MA0913.1	22	0	-	0	0	.
chr1	246003425	246003426	chr1:246003426:G:A	rs10754494	G	A	A	Hoxd9_MA0913.1	20	0	+	0	0	.
chr1	246004524	246004525	chr1:246004525:C:G	rs12406160	C	G	C	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr1	246004532	246004533	chr1:246004533:C:A	rs189588963	C	A	C	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr1	246070739	246070740	chr1:246070740:T:G	rs2787967	T	G	G	Hoxd9_MA0913.1	22	0	-	0	0	.
chr1	246139189	246139190	chr1:246139190:G:C	rs12120190	G	C	G	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr1	246147254	246147255	chr1:246147255:G:A	rs6426281	G	A	G	Hoxd9_MA0913.1	27	0	-	0	0	.
chr1	246147282	246147283	chr1:246147283:T:C	rs6426282	T	C	C	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr1	246215219	246215220	chr1:246215220:A:G	rs141679141	A	G	A	Hoxd9_MA0913.1	27	0	+	0	0	.
chr1	246219467	246219468	chr1:246219468:A:G	rs6426285	A	G	A	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr1	246265648	246265649	chr1:246265649:A:C	rs1770013	A	C	C	Hoxd9_MA0913.1	15	0	+	0	0	.
chr1	246297949	246297950	chr1:246297950:G:A	rs12039645	G	A	G	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr1	246304444	246304445	chr1:246304445:G:A	rs4654237	G	A	G	Hoxd9_MA0913.1	9	1	+	7.4131794346509094	8.879672775420401	GCCATAAAAG
chr1	246319398	246319399	chr1:246319399:A:G	rs80114668	A	G	a	Hoxd9_MA0913.1	9	1	-	8.594690316172638	7.75646393805828	GCCATTAAAT
chr1	246417380	246417381	chr1:246417381:G:C	rs7527781	G	C	G	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr1	246506376	246506377	chr1:246506377:C:T	rs112023519	C	T	C	Hoxd9_MA0913.1	1	1	+	8.594690316172638	8.246554688443613	GCCATTAAAT
chr1	246506400	246506401	chr1:246506401:G:A	rs4654275	G	A	G	Hoxd9_MA0913.1	25	0	+	0	0	.
chr1	246678013	246678014	chr1:246678014:T:C	rs58719925	T	C	T	Hoxd9_MA0913.1	11	0	-	0	0	.
chr1	246772815	246772816	chr1:246772816:A:G	rs75901300	A	G	G	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr1	247128050	247128051	chr1:247128051:C:T	rs61854860	C	T	a	Hoxd9_MA0913.1	11	0	+	0	0	.
chr1	247172890	247172891	chr1:247172891:G:A	rs28879193	G	A	G	Hoxd9_MA0913.1	0	1	+	8.2283733949328	7.280639671522341	GCAATAAAGA
chr1	247211196	247211197	chr1:247211197:T:C	rs557961901	T	C	t	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr1	247384492	247384493	chr1:247384493:G:A	rs9970991	G	A	G	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr1	247540699	247540700	chr1:247540700:G:A	rs6698437	G	A	G	Hoxd9_MA0913.1	24	0	-	0	0	.
chr1	247565659	247565660	chr1:247565660:C:T	rs1151694	C	T	T	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr1	248211565	248211566	chr1:248211566:C:T	rs4417104	C	T	C	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr1	248711221	248711222	chr1:248711222:G:A	rs12568427	G	A	A	Hoxd9_MA0913.1	11	0	+	0	0	.
chr1	248751199	248751200	chr1:248751200:C:A	rs908270784	C	A	-	Hoxd9_MA0913.1	2	1	-	8.082713108822833	3.30982751843015	GCGATTAAAA
chr1	248874016	248874017	chr1:248874017:C:T	rs184863848	C	T	C	Hoxd9_MA0913.1	17	0	-	0	0	.
chr1	248906778	248906779	chr1:248906779:G:C	rs535623280	G	C	G	Hoxd9_MA0913.1	11	0	-	0	0	.
chr1	248906785	248906786	chr1:248906786:A:G	rs7536216	A	G	A	Hoxd9_MA0913.1	4	1	-	7.932552609785828	4.64041835801085	GCAGTTAAAA
chr10	239172	239173	chr10:239173:C:G	rs17221239	C	G	C	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr10	550773	550774	chr10:550774:A:G	rs11253144	A	G	A	Hoxd9_MA0913.1	2	1	+	7.801678332738202	6.124219891280104	GCAATAAACA
chr10	1015921	1015922	chr10:1015922:A:G	rs2306406	A	G	A	Hoxd9_MA0913.1	3	1	+	9.209394307523764	7.381775367028661	GTAATAAAAT
chr10	1324883	1324884	chr10:1324884:C:T	rs2651490	C	T	T	Hoxd9_MA0913.1	19	0	+	0	0	.
chr10	1449143	1449144	chr10:1449144:C:T	rs1533484	C	T	C	Hoxd9_MA0913.1	29	0	-	0	0	.
chr10	1449163	1449164	chr10:1449164:T:C	rs57508058	T	C	T	Hoxd9_MA0913.1	9	1	-	8.2283733949328	6.761880054163308	GCAATAAAGA
chr10	1553285	1553286	chr10:1553286:G:T	rs7087167	G	T	G	Hoxd9_MA0913.1	1	1	-	8.838502353310592	6.418683977285333	GCCATTAAAA
chr10	1789479	1789480	chr10:1789480:T:C	rs17156939	T	C	T	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr10	2120924	2120925	chr10:2120925:G:A	rs4880975	G	A	G	Hoxd9_MA0913.1	14	0	-	0	0	.
chr10	2120928	2120929	chr10:2120929:G:A	rs4880976	G	A	G	Hoxd9_MA0913.1	10	0	-	0	0	.
chr10	2222160	2222161	chr10:2222161:A:C	rs943041	A	C	C	Hoxd9_MA0913.1	11	0	-	0	0	.
chr10	2471553	2471554	chr10:2471554:C:T	rs17176386	C	T	C	Hoxd9_MA0913.1	13	0	+	0	0	.
chr10	2536696	2536697	chr10:2536697:G:A	rs4424579	G	A	G	Hoxd9_MA0913.1	20	0	+	0	0	.
chr10	2846955	2846956	chr10:2846956:T:C	rs10903884	T	C	C	Hoxd9_MA0913.1	25	0	+	0	0	.
chr10	2882372	2882373	chr10:2882373:T:C	rs7905818	T	C	T	Hoxd9_MA0913.1	28	0	-	0	0	.
chr10	2898634	2898635	chr10:2898635:C:T	rs7912220	C	T	C	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr10	3014914	3014915	chr10:3014915:T:G	rs74714048	T	G	T	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr10	3014927	3014928	chr10:3014928:T:C	rs11251649	T	C	T	Hoxd9_MA0913.1	9	1	+	8.60979621184233	7.7715698337279715	ACAATAAAAT
chr10	3036122	3036123	chr10:3036123:A:C	rs11251659	A	C	C	Hoxd9_MA0913.1	21	0	-	0	0	.
chr10	3036153	3036154	chr10:3036154:A:G	rs11251662	A	G	A	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr10	3072801	3072802	chr10:3072802:A:G	rs10795000	A	G	A	Hoxd9_MA0913.1	8	1	+	9.760171550280933	8.187202972822991	GCAATTAAAA
chr10	3078504	3078505	chr10:3078505:C:T	rs774398285	C	T	C	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr10	3108121	3108122	chr10:3108122:C:T	rs17212803	C	T	C	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr10	3172240	3172241	chr10:3172241:T:C	rs185884037	T	C	T	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr10	3412060	3412061	chr10:3412061:G:C	rs60745586	G	C	G	Hoxd9_MA0913.1	17	0	-	0	0	.
chr10	3659277	3659278	chr10:3659278:T:C	rs10904069	T	C	T	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr10	3668243	3668244	chr10:3668244:T:A	rs60584803	T	A	T	Hoxd9_MA0913.1	11	0	+	0	0	.
chr10	3744431	3744432	chr10:3744432:T:C	rs143732604	T	C	T	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr10	3747030	3747031	chr10:3747031:G:A	rs10795070	G	A	g	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr10	3803722	3803723	chr10:3803723:G:A	rs60637951	G	A	G	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr10	3823373	3823374	chr10:3823374:T:C	rs10904102	T	C	T	Hoxd9_MA0913.1	8	1	-	8.568625789732518	6.995657212274576	ACAATTAAAT
chr10	3945684	3945685	chr10:3945685:C:T	rs11252207	C	T	C	Hoxd9_MA0913.1	29	0	-	0	0	.
chr10	3951005	3951006	chr10:3951006:G:C	rs10795104	G	C	a	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr10	3978575	3978576	chr10:3978576:T:C	rs10751950	T	C	C	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr10	4086606	4086607	chr10:4086607:C:T	rs73587480	C	T	C	Hoxd9_MA0913.1	26	0	-	0	0	.
chr10	4086645	4086646	chr10:4086646:C:T	rs61829256	C	T	C	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr10	4191844	4191845	chr10:4191845:T:A	rs911739	T	A	A	Hoxd9_MA0913.1	24	0	+	0	0	.
chr10	4191847	4191848	chr10:4191848:A:C	rs911740	A	C	C	Hoxd9_MA0913.1	27	0	+	0	0	.
chr10	4280457	4280458	chr10:4280458:T:C	rs920085095	T	C	T	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr10	4450332	4450333	chr10:4450333:T:C	rs10508283	T	C	T	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr10	4671860	4671861	chr10:4671861:C:T	rs11252650	C	T	C	Hoxd9_MA0913.1	16	0	+	0	0	.
chr10	4764222	4764223	chr10:4764223:A:G	rs17300566	A	G	A	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr10	4764249	4764250	chr10:4764250:A:G	rs143772886	A	G	A	Hoxd9_MA0913.1	24	0	+	0	0	.
chr10	4807965	4807966	chr10:4807966:T:C	rs75295407	T	C	T	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr10	4807980	4807981	chr10:4807981:C:T	rs2924286	C	T	T	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr10	4808119	4808120	chr10:4808120:T:C	rs78505172	T	C	T	Hoxd9_MA0913.1	0	1	-	8.853608248980283	9.801341972390743	ACAATAAAAA
chr10	4870822	4870823	chr10:4870823:A:T	rs56259387	A	T	A	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr10	4934617	4934618	chr10:4934618:C:A	rs12253332	C	A	C	Hoxd9_MA0913.1	11	0	-	0	0	.
chr10	5095621	5095622	chr10:5095622:A:T	rs10508294	A	T	A	Hoxd9_MA0913.1	11	0	+	0	0	.
chr10	5658744	5658745	chr10:5658745:A:T	rs35351865	A	T	a	Hoxd9_MA0913.1	23	0	+	0	0	.
chr10	5807356	5807357	chr10:5807357:A:G	rs565820079	A	G	A	Hoxd9_MA0913.1	9	1	+	8.879672775420401	7.4131794346509094	GCCATAAAAA
chr10	5945100	5945101	chr10:5945101:T:C	rs116264629	T	C	T	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr10	6044421	6044422	chr10:6044422:C:T	rs706781	C	T	T	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr10	6072329	6072330	chr10:6072330:G:A	rs10752194	G	A	A	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr10	6120190	6120191	chr10:6120191:C:G	rs11256860	C	G	c	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr10	6200565	6200566	chr10:6200566:C:T	rs10905981	C	T	C	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr10	6247329	6247330	chr10:6247330:C:G	rs147032314	C	G	G	Hoxd9_MA0913.1	18	0	-	0	0	.
chr10	6247358	6247359	chr10:6247359:C:T	rs138261826	C	T	C	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr10	6251010	6251011	chr10:6251011:G:C	rs57319805	G	C	G	Hoxd9_MA0913.1	1	1	-	8.282172881897674	5.189607869612962	CCAATTAAAA
chr10	6412356	6412357	chr10:6412357:G:C	rs612395	G	C	C	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr10	6459225	6459226	chr10:6459226:C:T	rs7099451	C	T	C	Hoxd9_MA0913.1	18	0	-	0	0	.
chr10	6499960	6499961	chr10:6499961:T:C	rs11259245	T	C	T	Hoxd9_MA0913.1	12	0	-	0	0	.
chr10	6766744	6766745	chr10:6766745:G:C	chr10:6766745:G:C	G	C	G	Hoxd9_MA0913.1	26	0	-	0	0	.
chr10	6766750	6766751	chr10:6766751:G:A	rs4747303	G	A	G	Hoxd9_MA0913.1	20	0	-	0	0	.
chr10	6900473	6900474	chr10:6900474:T:C	rs34253260	T	C	T	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr10	6953314	6953315	chr10:6953315:T:C	rs900154101	T	C	T	Hoxd9_MA0913.1	11	0	-	0	0	.
chr10	7606822	7606823	chr10:7606823:C:G	rs2050348	C	G	C	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr10	7618502	7618503	chr10:7618503:A:G	rs11255240	A	G	A	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr10	7618526	7618527	chr10:7618527:C:A	rs11255241	C	A	A	Hoxd9_MA0913.1	9	1	+	8.719303557138431	9.801341972390743	GCAATAAAAC
chr10	7887783	7887784	chr10:7887784:T:G	rs1244458	T	G	G	Hoxd9_MA0913.1	29	0	-	0	0	.
chr10	8088823	8088824	chr10:8088824:G:A	rs34570102	G	A	G	Hoxd9_MA0913.1	28	0	-	0	0	.
chr10	8088826	8088827	chr10:8088827:C:A	rs10752127	C	A	C	Hoxd9_MA0913.1	25	0	-	0	0	.
chr10	8127673	8127674	chr10:8127674:A:G	rs17447713	A	G	A	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr10	8128669	8128670	chr10:8128670:T:G	rs996835	T	G	G	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr10	8152787	8152788	chr10:8152788:T:C	rs10905291	T	C	T	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr10	8230587	8230588	chr10:8230588:A:C	rs522400	A	C	A	Hoxd9_MA0913.1	29	0	-	0	0	.
chr10	8268017	8268018	chr10:8268018:T:C	rs10905333	T	C	C	Hoxd9_MA0913.1	8	1	-	8.490366725581566	6.917398148123624	GTCATTAAAA
chr10	8295891	8295892	chr10:8295892:T:C	rs4749737	T	C	c	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr10	8326473	8326474	chr10:8326474:A:T	rs7098353	A	T	A	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr10	8396730	8396731	chr10:8396731:T:C	rs11819689	T	C	T	Hoxd9_MA0913.1	3	1	-	8.282172881897674	6.454553941402571	CCAATTAAAA
chr10	8712689	8712690	chr10:8712690:G:A	rs57628707	G	A	G	Hoxd9_MA0913.1	10	0	+	0	0	.
chr10	8727015	8727016	chr10:8727016:G:T	rs10508365	G	T	T	Hoxd9_MA0913.1	3	1	+	7.7299109947576845	5.9431900661238055	GCAGTAAAAT
chr10	9035021	9035022	chr10:9035022:C:T	rs17145095	C	T	C	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr10	9039442	9039443	chr10:9039443:T:C	rs2797276	T	C	C	Hoxd9_MA0913.1	23	0	+	0	0	.
chr10	9289994	9289995	chr10:9289995:T:G	rs185577534	T	G	T	Hoxd9_MA0913.1	8	1	-	7.3720090125411	5.372345372888559	GCCATTAAAG
chr10	9301345	9301346	chr10:9301346:C:T	rs556347202	C	T	C	Hoxd9_MA0913.1	26	0	-	0	0	.
chr10	9339885	9339886	chr10:9339886:T:C	rs118006041	T	C	T	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr10	9427463	9427464	chr10:9427464:G:A	rs11256199	G	A	G	Hoxd9_MA0913.1	1	1	-	8.635860738282448	8.287725110553424	GCCATAAAAT
chr10	9501213	9501214	chr10:9501214:A:C	rs7894116	A	C	C	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr10	9508294	9508295	chr10:9508295:G:C	rs7916016	G	C	G	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr10	9510856	9510857	chr10:9510857:C:A	rs997376354	C	A	C	Hoxd9_MA0913.1	15	0	-	0	0	.
chr10	9578579	9578580	chr10:9578580:A:T	rs10128525	A	T	T	Hoxd9_MA0913.1	26	0	-	0	0	.
chr10	9955086	9955087	chr10:9955087:C:A	rs2225990	C	A	A	Hoxd9_MA0913.1	15	0	-	0	0	.
chr10	10414568	10414569	chr10:10414569:G:C	rs10905721	G	C	G	Hoxd9_MA0913.1	1	1	-	8.323343304007485	5.230778291722773	CCAATAAAAA
chr10	10613074	10613075	chr10:10613075:A:G	rs4749973	A	G	G	Hoxd9_MA0913.1	26	0	-	0	0	.
chr10	10816739	10816740	chr10:10816740:A:G	rs17520345	A	G	A	Hoxd9_MA0913.1	6	1	+	8.594690316172638	1.7792696483932973	GCCATTAAAT
chr10	10826454	10826455	chr10:10826455:A:G	rs6602455	A	G	A	Hoxd9_MA0913.1	7	1	+	8.32301137036169	1.4838668930073484	GCAATAAATA
chr10	10844884	10844885	chr10:10844885:A:G	rs10795827	A	G	A	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr10	10883358	10883359	chr10:10883359:G:A	rs7906953	G	A	G	Hoxd9_MA0913.1	22	0	+	0	0	.
chr10	11196128	11196129	chr10:11196129:C:T	rs1261723121	C	T	C	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr10	11204305	11204306	chr10:11204306:C:A	rs1109861	C	A	C	Hoxd9_MA0913.1	10	0	+	0	0	.
chr10	11305481	11305482	chr10:11305482:C:G	rs74697116	C	G	C	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr10	11453258	11453259	chr10:11453259:C:T	rs7899389	C	T	T	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr10	11482851	11482852	chr10:11482852:T:G	rs74781644	T	G	T	Hoxd9_MA0913.1	18	0	-	0	0	.
chr10	11515399	11515400	chr10:11515400:G:T	rs11257144	G	T	G	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr10	11612457	11612458	chr10:11612458:A:C	rs117787139	A	C	A	Hoxd9_MA0913.1	23	0	+	0	0	.
chr10	11724864	11724865	chr10:11724865:C:T	rs7899413	C	T	c	Hoxd9_MA0913.1	22	0	-	0	0	.
chr10	11811406	11811407	chr10:11811407:A:T	rs72766329	A	T	T	Hoxd9_MA0913.1	22	0	-	0	0	.
chr10	11824042	11824043	chr10:11824043:A:C	rs1036521499	A	C	A	Hoxd9_MA0913.1	2	1	+	7.7299109947576845	6.8082417977873435	GCAGTAAAAT
chr10	11938630	11938631	chr10:11938631:C:T	rs17556978	C	T	C	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr10	11991080	11991081	chr10:11991081:G:A	rs7073825	G	A	A	Hoxd9_MA0913.1	29	0	+	0	0	.
chr10	12180556	12180557	chr10:12180557:C:A	chr10:12180557:C:A	C	A	C	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr10	12180556	12180557	chr10:12180557:C:T	rs3780865	C	T	C	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr10	12296232	12296233	chr10:12296233:C:T	rs557299961	C	T	C	Hoxd9_MA0913.1	29	0	+	0	0	.
chr10	12445739	12445740	chr10:12445740:A:C	rs10906152	A	C	A	Hoxd9_MA0913.1	26	0	-	0	0	.
chr10	12445740	12445741	chr10:12445741:T:C	rs114759362	T	C	T	Hoxd9_MA0913.1	25	0	-	0	0	.
chr10	12445768	12445769	chr10:12445769:G:A	rs138265246	G	A	G	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr10	12532113	12532114	chr10:12532114:C:T	rs2768465	C	T	C	Hoxd9_MA0913.1	15	0	+	0	0	.
chr10	12903202	12903203	chr10:12903203:T:C	rs1475611	T	C	T	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr10	13210831	13210832	chr10:13210832:T:C	rs12779658	T	C	T	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr10	13229314	13229315	chr10:13229315:G:A	rs12780441	G	A	A	Hoxd9_MA0913.1	15	0	+	0	0	.
chr10	13290567	13290568	chr10:13290568:C:T	rs6602645	C	T	t	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr10	13315397	13315398	chr10:13315398:G:C	rs147141806	G	C	G	Hoxd9_MA0913.1	18	0	+	0	0	.
chr10	13448477	13448478	chr10:13448478:G:A	rs74122734	G	A	A	Hoxd9_MA0913.1	21	0	-	0	0	.
chr10	13535507	13535508	chr10:13535508:C:T	rs60947871	C	T	C	Hoxd9_MA0913.1	27	0	+	0	0	.
chr10	13660828	13660829	chr10:13660829:C:T	rs10796107	C	T	C	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr10	13918349	13918350	chr10:13918350:T:G	rs2797868	T	G	T	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr10	13925461	13925462	chr10:13925462:G:A	rs75295517	G	A	G	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr10	13978941	13978942	chr10:13978942:T:C	rs73587371	T	C	T	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr10	14057306	14057307	chr10:14057307:A:C	rs7901315	A	C	A	Hoxd9_MA0913.1	6	1	+	8.334848631621252	3.8602717689530452	GCAATAAAAG
chr10	14057315	14057316	chr10:14057316:C:T	rs7916518	C	T	T	Hoxd9_MA0913.1	15	0	+	0	0	.
chr10	14072183	14072184	chr10:14072184:A:G	rs1000962	A	G	A	Hoxd9_MA0913.1	18	0	-	0	0	.
chr10	14159225	14159226	chr10:14159226:C:T	rs10796162	C	T	T	Hoxd9_MA0913.1	28	0	+	0	0	.
chr10	14241014	14241015	chr10:14241015:T:G	rs61836097	T	G	T	Hoxd9_MA0913.1	15	0	-	0	0	.
chr10	14428687	14428688	chr10:14428688:A:C	rs73593133	A	C	A	Hoxd9_MA0913.1	21	0	-	0	0	.
chr10	14549387	14549388	chr10:14549388:A:G	rs3829825	A	G	A	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr10	14549388	14549389	chr10:14549389:A:G	rs3813875	A	G	A	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr10	14562264	14562265	chr10:14562265:C:T	rs11259188	C	T	C	Hoxd9_MA0913.1	1	1	+	7.943390935685037	7.595255307956012	GCAATTAAGT
chr10	14562783	14562784	chr10:14562784:C:T	rs80309617	C	T	C	Hoxd9_MA0913.1	24	0	+	0	0	.
chr10	14562785	14562786	chr10:14562786:C:T	rs78008522	C	T	T	Hoxd9_MA0913.1	26	0	+	0	0	.
chr10	14621139	14621140	chr10:14621140:A:T	rs4748102	A	T	A	Hoxd9_MA0913.1	9	1	+	8.2283733949328	7.984561357794846	GCAATAAAGA
chr10	14624717	14624718	chr10:14624718:A:G	rs11592456	A	G	A	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr10	14624737	14624738	chr10:14624738:A:G	rs7902538	A	G	A	Hoxd9_MA0913.1	7	1	+	8.287725110553424	1.448580633199081	GTCATAAAAT
chr10	14700535	14700536	chr10:14700536:T:C	rs12355856	T	C	T	Hoxd9_MA0913.1	16	0	+	0	0	.
chr10	14936974	14936975	chr10:14936975:A:G	rs111386791	A	G	a	Hoxd9_MA0913.1	3	1	+	8.879672775420401	7.052053834925298	GCCATAAAAA
chr10	14962098	14962099	chr10:14962099:A:G	rs10796228	A	G	G	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr10	15197675	15197676	chr10:15197676:C:T	rs117309355	C	T	C	Hoxd9_MA0913.1	15	0	-	0	0	.
chr10	15720141	15720142	chr10:15720142:G:T	chr10:15720142:G:T	G	T	G	Hoxd9_MA0913.1	27	0	-	0	0	.
chr10	15725482	15725483	chr10:15725483:G:A	rs12570305	G	A	A	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr10	15726643	15726644	chr10:15726644:C:T	rs61637837	C	T	C	Hoxd9_MA0913.1	19	0	+	0	0	.
chr10	15755198	15755199	chr10:15755199:A:G	rs7905319	A	G	A	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr10	16280429	16280430	chr10:16280430:A:G	rs10508507	A	G	A	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr10	16441081	16441082	chr10:16441082:G:A	rs12572781	G	A	A	Hoxd9_MA0913.1	17	0	-	0	0	.
chr10	16767343	16767344	chr10:16767344:G:A	rs45459192	G	A	G	Hoxd9_MA0913.1	14	0	+	0	0	.
chr10	16943498	16943499	chr10:16943499:T:C	rs7898138	T	C	C	Hoxd9_MA0913.1	25	0	-	0	0	.
chr10	17005864	17005865	chr10:17005865:G:T	rs77520345	G	T	G	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr10	17035648	17035649	chr10:17035649:C:T	rs74120112	C	T	C	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr10	17063614	17063615	chr10:17063615:T:A	rs1907361	T	A	T	Hoxd9_MA0913.1	26	0	-	0	0	.
chr10	17176428	17176429	chr10:17176429:T:C	rs7092777	T	C	C	Hoxd9_MA0913.1	4	1	+	8.531537147691377	5.239402895916397	GTCATAAAAA
chr10	17233450	17233451	chr10:17233451:C:T	rs45437393	C	T	C	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr10	17242108	17242109	chr10:17242109:T:C	rs12253188	T	C	C	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr10	17349337	17349338	chr10:17349338:C:G	rs17136472	C	G	C	Hoxd9_MA0913.1	20	0	-	0	0	.
chr10	17377838	17377839	chr10:17377839:C:T	rs10752081	C	T	C	Hoxd9_MA0913.1	11	0	-	0	0	.
chr10	17432209	17432210	chr10:17432210:A:T	rs118068772	A	T	A	Hoxd9_MA0913.1	17	0	-	0	0	.
chr10	17432215	17432216	chr10:17432216:T:G	rs142194242	T	G	T	Hoxd9_MA0913.1	11	0	-	0	0	.
chr10	17546665	17546666	chr10:17546666:T:A	rs10795494	T	A	a	Hoxd9_MA0913.1	15	0	+	0	0	.
chr10	17643341	17643342	chr10:17643342:T:A	rs2251710	T	A	T	Hoxd9_MA0913.1	24	0	-	0	0	.
chr10	17932707	17932708	chr10:17932708:T:C	rs690890	T	C	C	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr10	17932713	17932714	chr10:17932714:G:A	rs476542	G	A	A	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr10	17954933	17954934	chr10:17954934:C:A	rs692635	C	A	C	Hoxd9_MA0913.1	13	0	+	0	0	.
chr10	17990918	17990919	chr10:17990919:C:G	rs35540736	C	G	C	Hoxd9_MA0913.1	16	0	-	0	0	.
chr10	18117507	18117508	chr10:18117508:C:T	rs76154333	C	T	C	Hoxd9_MA0913.1	10	0	-	0	0	.
chr10	18238937	18238938	chr10:18238938:A:G	rs1779230	A	G	A	Hoxd9_MA0913.1	16	0	-	0	0	.
chr10	18238940	18238941	chr10:18238941:T:C	rs7898536	T	C	T	Hoxd9_MA0913.1	13	0	-	0	0	.
chr10	19184870	19184871	chr10:19184871:A:G	rs78667503	A	G	A	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr10	19208846	19208847	chr10:19208847:G:A	rs2884433	G	A	G	Hoxd9_MA0913.1	26	0	+	0	0	.
chr10	19294364	19294365	chr10:19294365:C:A	rs80355567	C	A	C	Hoxd9_MA0913.1	27	0	-	0	0	.
chr10	19302535	19302536	chr10:19302536:G:A	rs34791488	G	A	G	Hoxd9_MA0913.1	20	0	-	0	0	.
chr10	19375831	19375832	chr10:19375832:A:C	rs11009655	A	C	A	Hoxd9_MA0913.1	27	0	+	0	0	.
chr10	19535976	19535977	chr10:19535977:T:G	rs11010274	T	G	T	Hoxd9_MA0913.1	4	1	+	9.801341972390743	6.509207720615763	GCAATAAAAA
chr10	19579437	19579438	chr10:19579438:A:T	rs10764083	A	T	A	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr10	19787684	19787685	chr10:19787685:A:G	rs7908480	A	G	G	Hoxd9_MA0913.1	5	1	-	8.490366725581566	5.096735376322007	GTCATTAAAA
chr10	19921859	19921860	chr10:19921860:T:A	rs1926205	T	A	T	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr10	19931385	19931386	chr10:19931386:T:C	rs17686154	T	C	T	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr10	19999730	19999731	chr10:19999731:G:T	rs11011729	G	T	G	Hoxd9_MA0913.1	1	1	-	8.719303557138431	6.299485181113172	GCAATAAAAC
chr10	20094853	20094854	chr10:20094854:G:T	rs7098330	G	T	T	Hoxd9_MA0913.1	1	1	-	8.60979621184233	6.1899778358170705	ACAATAAAAT
chr10	20300838	20300839	chr10:20300839:T:C	rs4748653	T	C	C	Hoxd9_MA0913.1	9	1	+	8.594690316172638	7.75646393805828	GCCATTAAAT
chr10	20428859	20428860	chr10:20428860:C:T	rs10508626	C	T	C	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr10	20788670	20788671	chr10:20788671:T:C	rs10828132	T	C	T	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr10	20788705	20788706	chr10:20788706:A:C	rs11012339	A	C	A	Hoxd9_MA0913.1	21	0	+	0	0	.
chr10	20924189	20924190	chr10:20924190:C:T	rs72793932	C	T	C	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr10	20936313	20936314	chr10:20936314:C:T	rs7098616	C	T	T	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr10	21240096	21240097	chr10:21240097:G:A	rs11012610	G	A	A	Hoxd9_MA0913.1	29	0	+	0	0	.
chr10	21292313	21292314	chr10:21292314:C:A	rs11012644	C	A	C	Hoxd9_MA0913.1	1	1	+	7.3720090125411	4.952190636515841	GCCATTAAAG
chr10	21293431	21293432	chr10:21293432:A:G	rs531793989	A	G	A	Hoxd9_MA0913.1	17	0	-	0	0	.
chr10	21485956	21485957	chr10:21485957:T:A	rs35336290	T	A	A	Hoxd9_MA0913.1	15	0	-	0	0	.
chr10	21558248	21558249	chr10:21558249:C:G	rs10828250	C	G	C	Hoxd9_MA0913.1	23	0	-	0	0	.
chr10	21669524	21669525	chr10:21669525:T:C	rs1038696172	T	C	T	Hoxd9_MA0913.1	22	0	+	0	0	.
chr10	21962450	21962451	chr10:21962451:T:C	rs2807967	T	C	C	Hoxd9_MA0913.1	8	1	-	9.55752993525279	7.984561357794846	GCAATAAAAT
chr10	22228637	22228638	chr10:22228638:T:C	rs115953985	T	C	T	Hoxd9_MA0913.1	9	1	+	9.209394307523764	8.371167929409406	GTAATAAAAT
chr10	22301040	22301041	chr10:22301041:G:A	rs9665024	G	A	G	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr10	22434549	22434550	chr10:22434550:G:A	rs7079531	G	A	A	Hoxd9_MA0913.1	2	1	+	8.123883530932645	9.801341972390743	GCGATAAAAA
chr10	22558963	22558964	chr10:22558964:A:G	rs7081744	A	G	A	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr10	22680577	22680578	chr10:22680578:T:G	chr10:22680578:T:G	T	G	T	Hoxd9_MA0913.1	22	0	+	0	0	.
chr10	22702377	22702378	chr10:22702378:T:C	rs1181321907	T	C	T	Hoxd9_MA0913.1	4	1	+	8.838502353310592	5.546368101535611	GCCATTAAAA
chr10	22852145	22852146	chr10:22852146:C:T	rs118145215	C	T	c	Hoxd9_MA0913.1	19	0	-	0	0	.
chr10	23048510	23048511	chr10:23048511:C:T	rs113362154	C	T	T	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr10	23097225	23097226	chr10:23097226:T:G	rs3793757	T	G	G	Hoxd9_MA0913.1	25	0	+	0	0	.
chr10	23151470	23151471	chr10:23151471:A:G	rs141783406	A	G	A	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr10	23171321	23171322	chr10:23171322:C:T	rs66523555	C	T	c	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr10	23354997	23354998	chr10:23354998:C:T	rs57556934	C	T	C	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr10	23605289	23605290	chr10:23605290:C:T	rs1337317	C	T	C	Hoxd9_MA0913.1	0	1	-	8.490366725581566	7.542633002171106	GTCATTAAAA
chr10	23754053	23754054	chr10:23754054:C:T	rs12780167	C	T	C	Hoxd9_MA0913.1	13	0	-	0	0	.
chr10	24307053	24307054	chr10:24307054:C:T	rs10828624	C	T	C	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr10	24313387	24313388	chr10:24313388:A:G	rs16924554	A	G	A	Hoxd9_MA0913.1	8	1	+	7.83890107168488	6.265932494226938	GCGATTAAAT
chr10	24393096	24393097	chr10:24393097:C:T	rs114090865	C	T	c	Hoxd9_MA0913.1	18	0	-	0	0	.
chr10	24470159	24470160	chr10:24470160:C:T	rs16924805	C	T	C	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr10	24504237	24504238	chr10:24504238:C:T	rs7904115	C	T	T	Hoxd9_MA0913.1	0	1	-	8.2283733949328	7.280639671522341	GCAATAAAGA
chr10	24514127	24514128	chr10:24514128:G:A	rs4748949	G	A	g	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr10	24534146	24534147	chr10:24534147:T:C	rs2297325	T	C	C	Hoxd9_MA0913.1	25	0	-	0	0	.
chr10	24575197	24575198	chr10:24575198:A:T	rs2367059	A	T	T	Hoxd9_MA0913.1	3	1	+	8.812437826870472	5.1980979577414885	ACAATTAAAA
chr10	24777784	24777785	chr10:24777785:C:T	rs78969081	C	T	C	Hoxd9_MA0913.1	25	0	-	0	0	.
chr10	24891989	24891990	chr10:24891990:G:A	rs10828718	G	A	A	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr10	24901370	24901371	chr10:24901371:T:C	rs547474130	T	C	T	Hoxd9_MA0913.1	19	0	+	0	0	.
chr10	25302372	25302373	chr10:25302373:C:T	rs60352386	C	T	C	Hoxd9_MA0913.1	29	0	-	0	0	.
chr10	25382452	25382453	chr10:25382453:A:C	rs1754253	A	C	A	Hoxd9_MA0913.1	6	1	+	8.287725110553424	3.8131482478852186	GTCATAAAAT
chr10	25536999	25537000	chr10:25537000:A:T	rs140717619	A	T	A	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr10	25628833	25628834	chr10:25628834:G:A	rs12249396	G	A	A	Hoxd9_MA0913.1	19	0	-	0	0	.
chr10	25646711	25646712	chr10:25646712:A:G	rs10764574	A	G	A	Hoxd9_MA0913.1	28	0	-	0	0	.
chr10	25687622	25687623	chr10:25687623:A:G	rs11014676	A	G	A	Hoxd9_MA0913.1	25	0	-	0	0	.
chr10	25875181	25875182	chr10:25875182:A:T	rs11014814	A	T	T	Hoxd9_MA0913.1	25	0	-	0	0	.
chr10	25875190	25875191	chr10:25875191:T:C	rs2367984	T	C	T	Hoxd9_MA0913.1	16	0	-	0	0	.
chr10	25901888	25901889	chr10:25901889:T:G	rs58373777	T	G	G	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr10	25907391	25907392	chr10:25907392:A:G	rs75888606	A	G	A	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr10	26056769	26056770	chr10:26056770:C:G	rs17738985	C	G	C	Hoxd9_MA0913.1	11	0	-	0	0	.
chr10	26445396	26445397	chr10:26445397:G:A	rs10828997	G	A	G	Hoxd9_MA0913.1	29	0	-	0	0	.
chr10	26445419	26445420	chr10:26445420:T:A	rs10764611	T	A	T	Hoxd9_MA0913.1	6	1	-	8.812437826870472	6.389117879336487	ACAATTAAAA
chr10	26573963	26573964	chr10:26573964:G:C	rs12778425	G	C	A	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr10	26628321	26628322	chr10:26628322:G:A	rs72788640	G	A	g	Hoxd9_MA0913.1	24	0	-	0	0	.
chr10	26628350	26628351	chr10:26628351:A:G	rs72788642	A	G	a	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr10	26683490	26683491	chr10:26683491:G:T	rs546229972	G	T	G	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr10	26683501	26683502	chr10:26683502:C:T	rs1748345	C	T	C	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr10	26685333	26685334	chr10:26685334:G:A	rs1748343	G	A	G	Hoxd9_MA0913.1	27	0	-	0	0	.
chr10	26851481	26851482	chr10:26851482:C:A	rs12269511	C	A	C	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr10	26880083	26880084	chr10:26880084:T:C	rs766117978	T	C	T	Hoxd9_MA0913.1	9	1	+	9.51635951314298	8.678133135028622	GCAATTAAAT
chr10	26925793	26925794	chr10:26925794:A:T	rs2765435	A	T	A	Hoxd9_MA0913.1	27	0	+	0	0	.
chr10	27101562	27101563	chr10:27101563:G:A	rs12770357	G	A	.	Hoxd9_MA0913.1	13	0	-	0	0	.
chr10	27234455	27234456	chr10:27234456:G:A	rs957047926	G	A	g	Hoxd9_MA0913.1	14	0	+	0	0	.
chr10	27285046	27285047	chr10:27285047:A:G	rs67395401	A	G	A	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr10	27345849	27345850	chr10:27345850:C:T	rs10829246	C	T	.	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr10	27878419	27878420	chr10:27878420:T:A	rs12780619	T	A	T	Hoxd9_MA0913.1	19	0	+	0	0	.
chr10	27957414	27957415	chr10:27957415:C:T	rs7922435	C	T	C	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr10	28293596	28293597	chr10:28293597:C:G	rs7090006	C	G	C	Hoxd9_MA0913.1	21	0	+	0	0	.
chr10	28293603	28293604	chr10:28293604:C:T	rs139949609	C	T	C	Hoxd9_MA0913.1	28	0	+	0	0	.
chr10	28433045	28433046	chr10:28433046:T:C	rs7917626	T	C	C	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr10	28464472	28464473	chr10:28464473:A:G	rs74127240	A	G	C	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr10	28645479	28645480	chr10:28645480:T:A	rs76632415	T	A	T	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr10	28663951	28663952	chr10:28663952:C:T	rs188710861	C	T	C	Hoxd9_MA0913.1	29	0	+	0	0	.
chr10	28704384	28704385	chr10:28704385:A:G	rs1379327538	A	G	A	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr10	28807785	28807786	chr10:28807786:G:C	rs150987823	G	C	G	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr10	28814504	28814505	chr10:28814505:C:T	rs1353390	C	T	C	Hoxd9_MA0913.1	29	0	+	0	0	.
chr10	28839957	28839958	chr10:28839958:T:C	rs72813806	T	C	T	Hoxd9_MA0913.1	3	1	-	8.323343304007485	6.495724363512382	CCAATAAAAA
chr10	28869734	28869735	chr10:28869735:A:G	rs75093011	A	G	a	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr10	28975830	28975831	chr10:28975831:T:C	rs72815946	T	C	T	Hoxd9_MA0913.1	17	0	+	0	0	.
chr10	29177676	29177677	chr10:29177677:T:C	rs485829	T	C	C	Hoxd9_MA0913.1	12	0	-	0	0	.
chr10	29243305	29243306	chr10:29243306:C:A	rs74128867	C	A	C	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr10	29377945	29377946	chr10:29377946:T:C	rs7076307	T	C	t	Hoxd9_MA0913.1	18	0	-	0	0	.
chr10	29607313	29607314	chr10:29607314:G:A	rs1247421	G	A	G	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr10	29627848	29627849	chr10:29627849:A:G	rs17768419	A	G	A	Hoxd9_MA0913.1	3	1	+	8.323343304007485	6.495724363512382	CCAATAAAAA
chr10	29659812	29659813	chr10:29659813:A:G	rs866750323	A	G	A	Hoxd9_MA0913.1	7	1	+	8.853608248980283	2.01446377162594	ACAATAAAAA
chr10	29699638	29699639	chr10:29699639:G:A	rs1629457	G	A	G	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr10	30014501	30014502	chr10:30014502:T:C	rs12243632	T	C	T	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr10	30156077	30156078	chr10:30156078:G:T	rs553299	G	T	G	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr10	30233707	30233708	chr10:30233708:A:G	rs139631836	A	G	A	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr10	30345614	30345615	chr10:30345615:A:G	rs6481673	A	G	.	Hoxd9_MA0913.1	8	1	-	8.079199333223738	7.557866295600249	GCAATAAATT
chr10	30436019	30436020	chr10:30436020:C:T	rs192266556	C	T	C	Hoxd9_MA0913.1	13	0	-	0	0	.
chr10	30445807	30445808	chr10:30445808:T:G	rs8176992	T	G	T	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr10	30540495	30540496	chr10:30540496:G:C	rs6481697	G	C	G	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr10	30540504	30540505	chr10:30540505:A:G	rs111526983	A	G	A	Hoxd9_MA0913.1	3	1	+	8.812437826870472	6.984818886375368	ACAATTAAAA
chr10	30557538	30557539	chr10:30557539:A:G	rs7915023	A	G	A	Hoxd9_MA0913.1	12	0	-	0	0	.
chr10	30759859	30759860	chr10:30759860:C:T	rs8181472	C	T	t	Hoxd9_MA0913.1	12	0	-	0	0	.
chr10	30791390	30791391	chr10:30791391:C:G	rs74135841	C	G	C	Hoxd9_MA0913.1	22	0	-	0	0	.
chr10	30811624	30811625	chr10:30811625:T:C	rs12355729	T	C	T	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr10	30871241	30871242	chr10:30871242:T:C	rs6481724	T	C	C	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr10	30985615	30985616	chr10:30985616:T:C	rs61845162	T	C	T	Hoxd9_MA0913.1	18	0	-	0	0	.
chr10	31760088	31760089	chr10:31760089:G:C	rs557504330	G	C	G	Hoxd9_MA0913.1	0	1	+	7.7299109947576845	6.251912326374428	GCAGTAAAAT
chr10	31760109	31760110	chr10:31760110:C:T	chr10:31760110:C:T	C	T	C	Hoxd9_MA0913.1	21	0	+	0	0	.
chr10	31760110	31760111	chr10:31760111:C:T	rs901787347	C	T	C	Hoxd9_MA0913.1	22	0	+	0	0	.
chr10	31760113	31760114	chr10:31760114:G:A	rs534780891	G	A	G	Hoxd9_MA0913.1	25	0	+	0	0	.
chr10	32056575	32056576	chr10:32056576:C:A	rs72777106	C	A	C	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr10	32104213	32104214	chr10:32104214:A:C	rs211408	A	C	A	Hoxd9_MA0913.1	2	1	+	9.801341972390743	8.879672775420401	GCAATAAAAA
chr10	32156041	32156042	chr10:32156042:T:C	rs2998027	T	C	T	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr10	32180021	32180022	chr10:32180022:G:T	rs16933045	G	T	G	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr10	32180726	32180727	chr10:32180727:T:C	rs2998057	T	C	C	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr10	32206171	32206172	chr10:32206172:T:C	rs2249892	T	C	T	Hoxd9_MA0913.1	24	0	-	0	0	.
chr10	32335707	32335708	chr10:32335708:A:G	rs950132	A	G	A	Hoxd9_MA0913.1	11	0	-	0	0	.
chr10	32895729	32895730	chr10:32895730:A:T	rs7914799	A	T	T	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr10	32985499	32985500	chr10:32985500:A:G	rs1187089	A	G	G	Hoxd9_MA0913.1	10	0	-	0	0	.
chr10	33092723	33092724	chr10:33092724:G:A	rs7898994	G	A	G	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr10	33101714	33101715	chr10:33101715:G:T	rs2057254	G	T	G	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr10	33194632	33194633	chr10:33194633:T:A	rs2474726	T	A	T	Hoxd9_MA0913.1	16	0	-	0	0	.
chr10	33204433	33204434	chr10:33204434:G:C	rs2269106	G	C	C	Hoxd9_MA0913.1	10	0	-	0	0	.
chr10	33204454	33204455	chr10:33204455:A:T	rs2269105	A	T	T	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr10	33377959	33377960	chr10:33377960:T:A	rs779231638	T	A	T	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr10	33500548	33500549	chr10:33500549:T:G	rs16915701	T	G	T	Hoxd9_MA0913.1	5	1	+	8.293678209511443	2.1131854787253816	GCAATTAAAG
chr10	33507894	33507895	chr10:33507895:T:C	rs2785246	T	C	C	Hoxd9_MA0913.1	29	0	-	0	0	.
chr10	33507936	33507937	chr10:33507937:C:T	chr10:33507937:C:T	C	T	C	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr10	33658560	33658561	chr10:33658561:G:T	rs7079605	G	T	T	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr10	33674100	33674101	chr10:33674101:A:T	rs149021310	A	T	A	Hoxd9_MA0913.1	8	1	+	8.123883530932645	6.645552928903593	GCGATAAAAA
chr10	34024495	34024496	chr10:34024496:T:C	chr10:34024496:T:C	T	C	t	Hoxd9_MA0913.1	18	0	-	0	0	.
chr10	34311057	34311058	chr10:34311058:T:C	rs1936429	T	C	C	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr10	34370422	34370423	chr10:34370423:C:T	rs10763985	C	T	c	Hoxd9_MA0913.1	17	0	-	0	0	.
chr10	34757860	34757861	chr10:34757861:C:G	rs10763999	C	G	C	Hoxd9_MA0913.1	28	0	+	0	0	.
chr10	35373064	35373065	chr10:35373065:T:G	rs11599097	T	G	T	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr10	35379980	35379981	chr10:35379981:G:A	rs116228203	G	A	G	Hoxd9_MA0913.1	0	1	+	7.973723031895638	7.025989308485178	GCAGTAAAAA
chr10	35735393	35735394	chr10:35735394:C:T	rs2790251	C	T	T	Hoxd9_MA0913.1	24	0	-	0	0	.
chr10	36305542	36305543	chr10:36305543:G:A	rs4934805	G	A	G	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr10	36504813	36504814	chr10:36504814:A:G	rs7911626	A	G	A	Hoxd9_MA0913.1	13	0	+	0	0	.
chr10	36559969	36559970	chr10:36559970:G:A	rs2505584	G	A	G	Hoxd9_MA0913.1	23	0	+	0	0	.
chr10	36608216	36608217	chr10:36608217:T:C	rs7917395	T	C	T	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr10	36778966	36778967	chr10:36778967:G:C	rs7076407	G	C	C	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr10	37101590	37101591	chr10:37101591:T:C	rs77707615	T	C	t	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr10	37290097	37290098	chr10:37290098:G:A	rs7096361	G	A	A	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr10	37736155	37736156	chr10:37736156:T:A	rs12783722	T	A	.	Hoxd9_MA0913.1	22	0	+	0	0	.
chr10	38063923	38063924	chr10:38063924:C:T	rs11011437	C	T	C	Hoxd9_MA0913.1	21	0	+	0	0	.
chr10	38605039	38605040	chr10:38605040:G:A	rs10870442	G	A	.	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr10	42390945	42390946	chr10:42390946:G:C	rs2489694	G	C	g	Hoxd9_MA0913.1	24	0	-	0	0	.
chr10	42971520	42971521	chr10:42971521:G:T	rs61845269	G	T	G	Hoxd9_MA0913.1	28	0	-	0	0	.
chr10	42971557	42971558	chr10:42971558:C:T	rs61845270	C	T	C	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr10	43123123	43123124	chr10:43123124:C:T	rs77761104	C	T	C	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr10	43247729	43247730	chr10:43247730:A:G	rs2460550	A	G	G	Hoxd9_MA0913.1	28	0	+	0	0	.
chr10	43400551	43400552	chr10:43400552:G:A	rs10899799	G	A	A	Hoxd9_MA0913.1	9	1	-	7.75646393805828	8.594690316172638	GCCATTAAAC
chr10	43734754	43734755	chr10:43734755:C:G	rs11238675	C	G	C	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr10	43847284	43847285	chr10:43847285:T:C	rs58280468	T	C	T	Hoxd9_MA0913.1	6	1	-	9.412035922551908	2.5966152547725674	GTAATTAAAA
chr10	43858422	43858423	chr10:43858423:C:A	rs881714	C	A	C	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr10	43950560	43950561	chr10:43950561:T:C	rs1380838	T	C	C	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr10	44066473	44066474	chr10:44066474:G:A	rs17155040	G	A	G	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr10	44071529	44071530	chr10:44071530:G:T	rs79544393	G	T	G	Hoxd9_MA0913.1	27	0	-	0	0	.
chr10	44105889	44105890	chr10:44105890:C:T	rs12766571	C	T	C	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr10	44628487	44628488	chr10:44628488:C:G	rs12249457	C	G	C	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr10	44794092	44794093	chr10:44794093:G:A	rs56009362	G	A	G	Hoxd9_MA0913.1	28	0	+	0	0	.
chr10	44894654	44894655	chr10:44894655:C:A	rs10900127	C	A	C	Hoxd9_MA0913.1	1	1	+	8.32301137036169	5.9031929943364325	GCAATAAATA
chr10	44976362	44976363	chr10:44976363:T:C	rs8457	T	C	T	Hoxd9_MA0913.1	5	1	+	9.760171550280933	6.3665402010213725	GCAATTAAAA
chr10	45370660	45370661	chr10:45370661:T:A	rs7913488	T	A	A	Hoxd9_MA0913.1	10	0	-	0	0	.
chr10	45470973	45470974	chr10:45470974:G:A	rs901683	G	A	G	Hoxd9_MA0913.1	29	0	+	0	0	.
chr10	45964933	45964934	chr10:45964934:T:G	rs1308001777	T	G	T	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr10	46048931	46048932	chr10:46048932:C:T	rs73318172	C	T	c	Hoxd9_MA0913.1	25	0	-	0	0	.
chr10	46099025	46099026	chr10:46099026:G:A	rs2843562	G	A	.	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr10	46172085	46172086	chr10:46172086:A:C	rs11259779	A	C	.	Hoxd9_MA0913.1	15	0	-	0	0	.
chr10	46229497	46229498	chr10:46229498:C:T	rs370211581	C	T	c	Hoxd9_MA0913.1	21	0	+	0	0	.
chr10	46243724	46243725	chr10:46243725:G:A	rs7903300	G	A	.	Hoxd9_MA0913.1	15	0	+	0	0	.
chr10	47109999	47110000	chr10:47110000:C:T	rs78566220	C	T	C	Hoxd9_MA0913.1	17	0	+	0	0	.
chr10	47113610	47113611	chr10:47113611:T:G	rs2382746	T	G	T	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr10	47174033	47174034	chr10:47174034:C:T	rs11592460	C	T	C	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr10	47210876	47210877	chr10:47210877:A:G	rs4291611	A	G	A	Hoxd9_MA0913.1	29	0	-	0	0	.
chr10	47336543	47336544	chr10:47336544:A:G	rs4922511	A	G	G	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr10	48196969	48196970	chr10:48196970:T:C	rs56036047	T	C	T	Hoxd9_MA0913.1	22	0	+	0	0	.
chr10	48414980	48414981	chr10:48414981:G:T	rs11101317	G	T	T	Hoxd9_MA0913.1	21	0	+	0	0	.
chr10	48507395	48507396	chr10:48507396:A:G	rs4838610	A	G	G	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr10	48532840	48532841	chr10:48532841:T:C	rs10857595	T	C	T	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr10	48558154	48558155	chr10:48558155:G:C	rs2166227	G	C	G	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr10	48648303	48648304	chr10:48648304:A:G	rs2377595	A	G	G	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr10	48692048	48692049	chr10:48692049:G:C	rs11101429	G	C	G	Hoxd9_MA0913.1	29	0	+	0	0	.
chr10	48800241	48800242	chr10:48800242:G:T	rs2448544	G	T	G	Hoxd9_MA0913.1	0	1	+	7.973723031895638	4.93658033594277	GCAGTAAAAA
chr10	48800267	48800268	chr10:48800268:G:C	rs11101501	G	C	C	Hoxd9_MA0913.1	26	0	+	0	0	.
chr10	48980919	48980920	chr10:48980920:C:T	rs4838663	C	T	T	Hoxd9_MA0913.1	0	1	-	9.168223885413955	8.220490162003495	GTAATTAAAT
chr10	49114656	49114657	chr10:49114657:G:A	rs35666409	G	A	G	Hoxd9_MA0913.1	10	0	+	0	0	.
chr10	49143838	49143839	chr10:49143839:T:C	rs2377982	T	C	T	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr10	49242684	49242685	chr10:49242685:G:A	rs11101057	G	A	G	Hoxd9_MA0913.1	26	0	-	0	0	.
chr10	49242694	49242695	chr10:49242695:G:A	rs7903863	G	A	G	Hoxd9_MA0913.1	16	0	-	0	0	.
chr10	49261888	49261889	chr10:49261889:C:T	rs77168647	C	T	C	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr10	49327949	49327950	chr10:49327950:G:A	rs4623813	G	A	G	Hoxd9_MA0913.1	1	1	-	8.838502353310592	8.490366725581566	GCCATTAAAA
chr10	49327953	49327954	chr10:49327954:G:A	rs527457617	G	A	G	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr10	49747602	49747603	chr10:49747603:A:G	rs1258173	A	G	G	Hoxd9_MA0913.1	19	0	-	0	0	.
chr10	50219700	50219701	chr10:50219701:A:T	rs1037537185	A	T	T	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr10	50323299	50323300	chr10:50323300:A:G	rs2842096	A	G	G	Hoxd9_MA0913.1	13	0	-	0	0	.
chr10	50625736	50625737	chr10:50625737:A:C	chr10:50625737:A:C	A	C	A	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr10	50973077	50973078	chr10:50973078:T:A	rs72787090	T	A	T	Hoxd9_MA0913.1	14	0	-	0	0	.
chr10	51104227	51104228	chr10:51104228:A:C	rs9415718	A	C	a	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr10	51118190	51118191	chr10:51118191:A:G	rs7897669	A	G	a	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr10	51177326	51177327	chr10:51177327:A:G	rs9415776	A	G	A	Hoxd9_MA0913.1	2	1	+	9.453206344661718	7.775747903203619	GTAATAAAAA
chr10	51177351	51177352	chr10:51177352:G:A	rs41403246	G	A	G	Hoxd9_MA0913.1	27	0	+	0	0	.
chr10	51231996	51231997	chr10:51231997:A:G	rs77671639	A	G	A	Hoxd9_MA0913.1	12	0	-	0	0	.
chr10	51245047	51245048	chr10:51245048:C:T	rs7894753	C	T	C	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr10	51682987	51682988	chr10:51682988:T:C	rs12246673	T	C	T	Hoxd9_MA0913.1	9	1	+	8.287725110553424	7.449498732439066	GTCATAAAAT
chr10	51919439	51919440	chr10:51919440:C:G	rs2186146	C	G	C	Hoxd9_MA0913.1	11	0	-	0	0	.
chr10	52019719	52019720	chr10:52019720:C:G	rs10823973	C	G	C	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr10	52614196	52614197	chr10:52614197:C:A	rs10762815	C	A	C	Hoxd9_MA0913.1	0	1	-	7.932552609785828	4.8954099138329585	GCAGTTAAAA
chr10	52744839	52744840	chr10:52744840:C:T	rs4935045	C	T	T	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr10	52802058	52802059	chr10:52802059:G:A	rs35967208	G	A	g	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr10	52990849	52990850	chr10:52990850:T:C	rs2244637	T	C	T	Hoxd9_MA0913.1	18	0	-	0	0	.
chr10	53030670	53030671	chr10:53030671:T:C	rs2265884	T	C	C	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr10	53071764	53071765	chr10:53071765:A:G	rs72802319	A	G	A	Hoxd9_MA0913.1	11	0	+	0	0	.
chr10	53091164	53091165	chr10:53091165:C:T	rs79301467	C	T	C	Hoxd9_MA0913.1	12	0	-	0	0	.
chr10	53155652	53155653	chr10:53155653:G:A	rs10824916	G	A	G	Hoxd9_MA0913.1	17	0	+	0	0	.
chr10	53884194	53884195	chr10:53884195:C:T	rs7905665	C	T	T	Hoxd9_MA0913.1	1	1	+	7.83890107168488	7.490765443955856	GCGATTAAAT
chr10	53886883	53886884	chr10:53886884:G:A	rs41487044	G	A	A	Hoxd9_MA0913.1	27	0	-	0	0	.
chr10	53998260	53998261	chr10:53998261:C:T	rs11003984	C	T	C	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr10	54065236	54065237	chr10:54065237:A:G	rs17711275	A	G	A	Hoxd9_MA0913.1	3	1	+	8.812437826870472	6.984818886375368	ACAATTAAAA
chr10	54708987	54708988	chr10:54708988:G:A	rs191659030	G	A	G	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr10	55645752	55645753	chr10:55645753:C:G	rs76757807	C	G	C	Hoxd9_MA0913.1	24	0	-	0	0	.
chr10	55670385	55670386	chr10:55670386:T:G	rs7922805	T	G	T	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr10	56176094	56176095	chr10:56176095:C:T	rs2393006	C	T	T	Hoxd9_MA0913.1	0	1	-	9.801341972390743	8.853608248980283	GCAATAAAAA
chr10	56294048	56294049	chr10:56294049:G:T	rs3861045	G	T	T	Hoxd9_MA0913.1	26	0	+	0	0	.
chr10	56874835	56874836	chr10:56874836:G:A	rs16909599	G	A	g	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr10	57133746	57133747	chr10:57133747:T:G	rs3105355	T	G	G	Hoxd9_MA0913.1	23	0	-	0	0	.
chr10	57695545	57695546	chr10:57695546:G:A	rs77446829	G	A	G	Hoxd9_MA0913.1	26	0	+	0	0	.
chr10	57831522	57831523	chr10:57831523:G:A	rs7477339	G	A	G	Hoxd9_MA0913.1	11	0	+	0	0	.
chr10	57891564	57891565	chr10:57891565:G:A	rs7923893	G	A	G	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr10	57983589	57983590	chr10:57983590:T:C	rs3013721	T	C	T	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr10	57983614	57983615	chr10:57983615:T:C	rs11005991	T	C	T	Hoxd9_MA0913.1	23	0	+	0	0	.
chr10	58029115	58029116	chr10:58029116:C:T	rs11819308	C	T	C	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr10	58064133	58064134	chr10:58064134:C:T	rs2184033	C	T	C	Hoxd9_MA0913.1	29	0	+	0	0	.
chr10	58065738	58065739	chr10:58065739:G:A	rs1698416	G	A	A	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr10	58299880	58299881	chr10:58299881:T:C	rs2590289	T	C	T	Hoxd9_MA0913.1	3	1	-	8.323343304007485	6.495724363512382	CCAATAAAAA
chr10	58336089	58336090	chr10:58336090:C:T	rs16912155	C	T	T	Hoxd9_MA0913.1	25	0	-	0	0	.
chr10	58672884	58672885	chr10:58672885:G:A	rs12770994	G	A	G	Hoxd9_MA0913.1	14	0	-	0	0	.
chr10	58755261	58755262	chr10:58755262:T:C	rs7094271	T	C	T	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr10	58833047	58833048	chr10:58833048:A:G	rs7098555	A	G	A	Hoxd9_MA0913.1	25	0	+	0	0	.
chr10	58967588	58967589	chr10:58967589:A:G	rs11006329	A	G	A	Hoxd9_MA0913.1	3	1	+	8.678133135028622	6.850514194533517	GCAATTAAAC
chr10	59019933	59019934	chr10:59019934:T:C	rs527593574	T	C	T	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr10	59073544	59073545	chr10:59073545:T:C	rs80302597	T	C	T	Hoxd9_MA0913.1	3	1	-	7.943390935685037	6.115771995189933	GCAATTAAGT
chr10	59099823	59099824	chr10:59099824:G:A	rs16913129	G	A	G	Hoxd9_MA0913.1	2	1	-	8.635860738282448	3.1071859034020073	GCCATAAAAT
chr10	59125539	59125540	chr10:59125540:C:T	rs919827	C	T	T	Hoxd9_MA0913.1	27	0	+	0	0	.
chr10	59148707	59148708	chr10:59148708:C:A	rs987059	C	A	A	Hoxd9_MA0913.1	15	0	-	0	0	.
chr10	59178012	59178013	chr10:59178013:A:G	rs117169145	A	G	A	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr10	59241273	59241274	chr10:59241274:T:C	rs2893798	T	C	C	Hoxd9_MA0913.1	6	1	-	9.412035922551908	2.5966152547725674	GTAATTAAAA
chr10	59450792	59450793	chr10:59450793:A:C	rs12772551	A	C	C	Hoxd9_MA0913.1	23	0	-	0	0	.
chr10	59557234	59557235	chr10:59557235:G:C	rs118029054	G	C	G	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr10	59578028	59578029	chr10:59578029:C:T	rs7082987	C	T	C	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr10	59684049	59684050	chr10:59684050:A:G	rs1171660	A	G	A	Hoxd9_MA0913.1	3	1	+	9.168223885413955	7.340604944918851	GTAATTAAAT
chr10	59700795	59700796	chr10:59700796:C:A	rs61863104	C	A	C	Hoxd9_MA0913.1	24	0	+	0	0	.
chr10	59907797	59907798	chr10:59907798:C:G	rs1171831	C	G	G	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr10	60009578	60009579	chr10:60009579:C:T	rs10821653	C	T	C	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr10	60041643	60041644	chr10:60041644:G:T	rs2393582	G	T	T	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr10	60205429	60205430	chr10:60205430:T:C	rs10732408	T	C	C	Hoxd9_MA0913.1	4	1	+	8.812437826870472	5.520303575095493	ACAATTAAAA
chr10	60238197	60238198	chr10:60238198:A:G	rs10821707	A	G	G	Hoxd9_MA0913.1	16	0	+	0	0	.
chr10	60298589	60298590	chr10:60298590:C:A	rs147733966	C	A	C	Hoxd9_MA0913.1	24	0	-	0	0	.
chr10	60488193	60488194	chr10:60488194:C:T	rs1938529	C	T	C	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr10	60488204	60488205	chr10:60488205:A:C	rs11812654	A	C	A	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr10	60565906	60565907	chr10:60565907:G:T	rs10509132	G	T	G	Hoxd9_MA0913.1	14	0	-	0	0	.
chr10	60630499	60630500	chr10:60630500:A:G	rs2393676	A	G	G	Hoxd9_MA0913.1	2	1	+	8.187202972822991	6.509744531364891	GCAATTAAGA
chr10	60630835	60630836	chr10:60630836:A:G	rs10821807	A	G	A	Hoxd9_MA0913.1	4	1	-	8.531537147691377	5.239402895916397	GTCATAAAAA
chr10	60632032	60632033	chr10:60632033:G:A	rs7080024	G	A	G	Hoxd9_MA0913.1	21	0	+	0	0	.
chr10	60770001	60770002	chr10:60770002:C:G	rs72811859	C	G	C	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr10	60978190	60978191	chr10:60978191:G:T	rs10994587	G	T	G	Hoxd9_MA0913.1	23	0	-	0	0	.
chr10	61188855	61188856	chr10:61188856:T:C	rs111585463	T	C	T	Hoxd9_MA0913.1	14	0	-	0	0	.
chr10	61280571	61280572	chr10:61280572:A:G	rs10994703	A	G	A	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr10	61408225	61408226	chr10:61408226:G:A	rs141830265	G	A	G	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr10	61410884	61410885	chr10:61410885:G:A	rs573809974	G	A	G	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr10	61463766	61463767	chr10:61463767:T:C	rs758013414	T	C	T	Hoxd9_MA0913.1	6	1	-	8.531537147691377	1.7161164799120368	GTCATAAAAA
chr10	61465075	61465076	chr10:61465076:C:A	rs117403755	C	A	C	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr10	61475759	61475760	chr10:61475760:G:A	rs117674140	G	A	G	Hoxd9_MA0913.1	27	0	+	0	0	.
chr10	61689065	61689066	chr10:61689066:G:T	rs112759087	G	T	G	Hoxd9_MA0913.1	24	0	+	0	0	.
chr10	61709505	61709506	chr10:61709506:T:C	rs10994886	T	C	T	Hoxd9_MA0913.1	21	0	+	0	0	.
chr10	61763507	61763508	chr10:61763508:T:C	rs2675612	T	C	T	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr10	61910105	61910106	chr10:61910106:C:A	rs4948487	C	A	A	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr10	61935239	61935240	chr10:61935240:A:G	rs2393783	A	G	A	Hoxd9_MA0913.1	9	1	+	8.853608248980283	7.387114908210791	ACAATAAAAA
chr10	61992750	61992751	chr10:61992751:A:G	rs149590676	A	G	A	Hoxd9_MA0913.1	28	0	-	0	0	.
chr10	61993722	61993723	chr10:61993723:A:G	rs9415635	A	G	A	Hoxd9_MA0913.1	14	0	+	0	0	.
chr10	61993736	61993737	chr10:61993737:G:A	rs80092100	G	A	G	Hoxd9_MA0913.1	28	0	+	0	0	.
chr10	62025329	62025330	chr10:62025330:G:T	rs10821944	G	T	G	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr10	62049864	62049865	chr10:62049865:C:A	rs10821948	C	A	C	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr10	62056071	62056072	chr10:62056072:C:T	rs10995019	C	T	C	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr10	62056106	62056107	chr10:62056107:T:C	rs7898881	T	C	C	Hoxd9_MA0913.1	26	0	+	0	0	.
chr10	62071741	62071742	chr10:62071742:T:G	rs12773075	T	G	G	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr10	62083732	62083733	chr10:62083733:A:G	rs12250063	A	G	A	Hoxd9_MA0913.1	28	0	+	0	0	.
chr10	62115615	62115616	chr10:62115616:T:G	rs3862866	T	G	T	Hoxd9_MA0913.1	7	1	-	8.568625789732518	5.2747790380140875	ACAATTAAAT
chr10	62163335	62163336	chr10:62163336:A:T	rs4314953	A	T	T	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr10	62330582	62330583	chr10:62330583:T:G	rs10995123	T	G	T	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr10	62334406	62334407	chr10:62334407:C:T	rs10995124	C	T	C	Hoxd9_MA0913.1	2	1	+	8.490366725581566	2.9616918907011263	GTCATTAAAA
chr10	62503642	62503643	chr10:62503643:C:G	rs4746409	C	G	C	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr10	62545850	62545851	chr10:62545851:A:G	rs148482214	A	G	A	Hoxd9_MA0913.1	3	1	+	8.334848631621252	6.507229691126146	GCAATAAAAG
chr10	62706890	62706891	chr10:62706891:T:C	rs11599754	T	C	T	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr10	63110212	63110213	chr10:63110213:T:C	rs10995443	T	C	T	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr10	63236488	63236489	chr10:63236489:C:T	rs77731585	C	T	C	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr10	63629647	63629648	chr10:63629648:T:C	rs183602733	T	C	T	Hoxd9_MA0913.1	28	0	+	0	0	.
chr10	63744223	63744224	chr10:63744224:A:T	rs4746384	A	T	A	Hoxd9_MA0913.1	26	0	+	0	0	.
chr10	64070556	64070557	chr10:64070557:C:T	rs2578014	C	T	C	Hoxd9_MA0913.1	10	0	-	0	0	.
chr10	64396563	64396564	chr10:64396564:A:T	rs1462890997	A	T	A	Hoxd9_MA0913.1	22	0	+	0	0	.
chr10	64649237	64649238	chr10:64649238:G:A	rs2394065	G	A	A	Hoxd9_MA0913.1	22	0	+	0	0	.
chr10	64846567	64846568	chr10:64846568:T:C	rs71493914	T	C	T	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr10	65110245	65110246	chr10:65110246:A:G	rs10996217	A	G	g	Hoxd9_MA0913.1	8	1	+	7.7976343601680895	6.224665782710147	GCCATAAAAC
chr10	65196246	65196247	chr10:65196247:C:T	rs1397023	C	T	C	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr10	65476126	65476127	chr10:65476127:G:A	rs10996457	G	A	G	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr10	65611496	65611497	chr10:65611497:A:G	rs1902362	A	G	G	Hoxd9_MA0913.1	8	1	+	8.287725110553424	6.714756533095481	GTCATAAAAT
chr10	65765134	65765135	chr10:65765135:C:A	rs10822630	C	A	C	Hoxd9_MA0913.1	0	1	+	8.282172881897674	8.812437826870472	CCAATTAAAA
chr10	66142679	66142680	chr10:66142680:A:C	rs10509249	A	C	A	Hoxd9_MA0913.1	10	0	+	0	0	.
chr10	66180579	66180580	chr10:66180580:G:T	rs66921337	G	T	G	Hoxd9_MA0913.1	16	0	+	0	0	.
chr10	66604281	66604282	chr10:66604282:G:A	rs6480182	G	A	G	Hoxd9_MA0913.1	13	0	+	0	0	.
chr10	66853132	66853133	chr10:66853133:A:G	rs10822931	A	G	A	Hoxd9_MA0913.1	22	0	-	0	0	.
chr10	66941615	66941616	chr10:66941616:T:A	rs61866209	T	A	T	Hoxd9_MA0913.1	27	0	+	0	0	.
chr10	66967903	66967904	chr10:66967904:T:C	rs11591465	T	C	T	Hoxd9_MA0913.1	1	1	+	9.209394307523764	9.55752993525279	GTAATAAAAT
chr10	67000048	67000049	chr10:67000049:G:A	rs12779109	G	A	G	Hoxd9_MA0913.1	18	0	+	0	0	.
chr10	67003926	67003927	chr10:67003927:T:C	rs1925615	T	C	C	Hoxd9_MA0913.1	7	1	-	9.801341972390743	2.9621974950363996	GCAATAAAAA
chr10	67076018	67076019	chr10:67076019:T:G	rs2182162	T	G	T	Hoxd9_MA0913.1	18	0	-	0	0	.
chr10	67088490	67088491	chr10:67088491:C:A	rs2394343	C	A	A	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr10	67221604	67221605	chr10:67221605:C:T	rs10997578	C	T	c	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr10	68032180	68032181	chr10:68032181:G:C	rs482806	G	C	G	Hoxd9_MA0913.1	23	0	+	0	0	.
chr10	68215275	68215276	chr10:68215276:C:T	rs11813125	C	T	C	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr10	68300455	68300456	chr10:68300456:A:C	rs10047388	A	C	c	Hoxd9_MA0913.1	9	1	+	8.32301137036169	7.240972955109379	GCAATAAATA
chr10	68407702	68407703	chr10:68407703:A:G	rs112234435	A	G	A	Hoxd9_MA0913.1	28	0	+	0	0	.
chr10	68861565	68861566	chr10:68861566:G:C	rs77040825	G	C	g	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr10	69090919	69090920	chr10:69090920:A:G	rs17558167	A	G	G	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr10	69255041	69255042	chr10:69255042:G:A	rs77380489	G	A	G	Hoxd9_MA0913.1	25	0	+	0	0	.
chr10	69326158	69326159	chr10:69326159:T:C	rs11812380	T	C	C	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr10	69450011	69450012	chr10:69450012:T:C	rs12414198	T	C	C	Hoxd9_MA0913.1	26	0	-	0	0	.
chr10	69507655	69507656	chr10:69507656:T:G	rs1665583	T	G	T	Hoxd9_MA0913.1	18	0	+	0	0	.
chr10	69507660	69507661	chr10:69507661:T:G	rs3750790	T	G	-	Hoxd9_MA0913.1	23	0	+	0	0	.
chr10	69678201	69678202	chr10:69678202:C:T	rs183089761	C	T	C	Hoxd9_MA0913.1	0	1	-	8.2283733949328	7.280639671522341	GCAATAAAGA
chr10	69855949	69855950	chr10:69855950:T:C	chr10:69855950:T:C	T	C	T	Hoxd9_MA0913.1	16	0	-	0	0	.
chr10	69890983	69890984	chr10:69890984:T:C	rs2763365	T	C	T	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr10	70147496	70147497	chr10:70147497:C:T	chr10:70147497:C:T	C	T	C	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr10	70186935	70186936	chr10:70186936:T:A	rs7896680	T	A	A	Hoxd9_MA0913.1	16	0	-	0	0	.
chr10	70342019	70342020	chr10:70342020:G:A	rs61856826	G	A	g	Hoxd9_MA0913.1	26	0	+	0	0	.
chr10	70551697	70551698	chr10:70551698:A:G	rs870459	A	G	A	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr10	70551725	70551726	chr10:70551726:A:G	rs881823	A	G	G	Hoxd9_MA0913.1	8	1	+	8.719303557138431	7.146334979680488	GCAATAAAAC
chr10	70593943	70593944	chr10:70593944:G:C	rs10762395	G	C	G	Hoxd9_MA0913.1	13	0	-	0	0	.
chr10	70755934	70755935	chr10:70755935:C:A	rs946742	C	A	A	Hoxd9_MA0913.1	10	0	-	0	0	.
chr10	70912493	70912494	chr10:70912494:A:G	rs10999581	A	G	A	Hoxd9_MA0913.1	4	1	-	9.168223885413955	5.8760896336389745	GTAATTAAAT
chr10	71108499	71108500	chr10:71108500:C:A	rs2211317	C	A	C	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr10	71236401	71236402	chr10:71236402:C:A	rs115068292	C	A	C	Hoxd9_MA0913.1	12	0	-	0	0	.
chr10	71289564	71289565	chr10:71289565:G:A	rs16928641	G	A	A	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr10	71392602	71392603	chr10:71392603:A:G	rs73281821	A	G	A	Hoxd9_MA0913.1	3	1	+	8.293678209511443	6.466059269016337	GCAATTAAAG
chr10	71513155	71513156	chr10:71513156:A:C	rs6480527	A	C	C	Hoxd9_MA0913.1	4	1	-	8.678133135028622	5.385998883253641	GCAATTAAAC
chr10	71586112	71586113	chr10:71586113:T:C	rs4747169	T	C	C	Hoxd9_MA0913.1	11	0	-	0	0	.
chr10	71780172	71780173	chr10:71780173:G:A	rs9415998	G	A	A	Hoxd9_MA0913.1	0	1	-	8.282172881897674	6.723028854328064	CCAATTAAAA
chr10	71781215	71781216	chr10:71781216:G:A	rs9416000	G	A	A	Hoxd9_MA0913.1	16	0	+	0	0	.
chr10	71856725	71856726	chr10:71856726:T:C	rs4746096	T	C	T	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr10	71865120	71865121	chr10:71865121:T:C	rs59150417	T	C	T	Hoxd9_MA0913.1	27	0	+	0	0	.
chr10	71892827	71892828	chr10:71892828:G:A	rs4261207	G	A	G	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr10	71898886	71898887	chr10:71898887:A:G	rs11000073	A	G	G	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr10	71905892	71905893	chr10:71905893:A:G	rs4747217	A	G	A	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr10	72171805	72171806	chr10:72171806:T:G	rs11000201	T	G	T	Hoxd9_MA0913.1	27	0	+	0	0	.
chr10	72330427	72330428	chr10:72330428:T:C	rs11000266	T	C	T	Hoxd9_MA0913.1	10	0	-	0	0	.
chr10	72712334	72712335	chr10:72712335:G:A	rs111974896	G	A	G	Hoxd9_MA0913.1	13	0	-	0	0	.
chr10	72784488	72784489	chr10:72784489:G:T	rs7893632	G	T	G	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr10	72834378	72834379	chr10:72834379:C:T	rs147667372	C	T	C	Hoxd9_MA0913.1	27	0	-	0	0	.
chr10	73785465	73785466	chr10:73785466:A:T	rs577947937	A	T	A	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr10	73785492	73785493	chr10:73785493:A:G	rs12256103	A	G	G	Hoxd9_MA0913.1	14	0	+	0	0	.
chr10	73940915	73940916	chr10:73940916:G:T	chr10:73940916:G:T	G	T	G	Hoxd9_MA0913.1	28	0	-	0	0	.
chr10	74282489	74282490	chr10:74282490:C:T	rs10824139	C	T	C	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr10	74298010	74298011	chr10:74298011:A:G	rs10762593	A	G	A	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr10	74684328	74684329	chr10:74684329:C:T	rs7071324	C	T	T	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr10	74925342	74925343	chr10:74925343:A:G	rs11001204	A	G	A	Hoxd9_MA0913.1	16	0	-	0	0	.
chr10	75111189	75111190	chr10:75111190:T:C	rs142322452	T	C	T	Hoxd9_MA0913.1	11	0	+	0	0	.
chr10	75461985	75461986	chr10:75461986:A:C	rs11001399	A	C	A	Hoxd9_MA0913.1	27	0	-	0	0	.
chr10	75469307	75469308	chr10:75469308:T:C	rs376444424	T	C	T	Hoxd9_MA0913.1	23	0	+	0	0	.
chr10	75569513	75569514	chr10:75569514:G:T	rs4746308	G	T	G	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr10	75611370	75611371	chr10:75611371:T:C	rs74147136	T	C	T	Hoxd9_MA0913.1	9	1	+	9.209394307523764	8.371167929409406	GTAATAAAAT
chr10	75773187	75773188	chr10:75773188:C:T	rs61860541	C	T	C	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr10	76134071	76134072	chr10:76134072:A:C	rs12355465	A	C	C	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr10	76304132	76304133	chr10:76304133:A:G	rs2579787	A	G	A	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr10	76455027	76455028	chr10:76455028:C:T	rs16933554	C	T	C	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr10	76559203	76559204	chr10:76559204:A:G	rs76724909	A	G	A	Hoxd9_MA0913.1	9	1	+	8.853608248980283	7.387114908210791	ACAATAAAAA
chr10	76945591	76945592	chr10:76945592:G:C	rs12413674	G	C	G	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr10	77028901	77028902	chr10:77028902:T:G	rs4980123	T	G	G	Hoxd9_MA0913.1	26	0	+	0	0	.
chr10	77029796	77029797	chr10:77029797:A:G	rs2452333	A	G	G	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr10	77047359	77047360	chr10:77047360:C:T	rs12765834	C	T	T	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr10	77112318	77112319	chr10:77112319:G:T	rs12355548	G	T	G	Hoxd9_MA0913.1	22	0	+	0	0	.
chr10	77139645	77139646	chr10:77139646:C:T	rs1871063	C	T	C	Hoxd9_MA0913.1	23	0	-	0	0	.
chr10	77391549	77391550	chr10:77391550:T:C	rs11002150	T	C	T	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr10	77524314	77524315	chr10:77524315:G:A	rs77992880	G	A	G	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr10	77562890	77562891	chr10:77562891:G:C	rs16935035	G	C	G	Hoxd9_MA0913.1	0	1	+	7.984561357794846	6.506562689411589	GCAATAAAGT
chr10	78104274	78104275	chr10:78104275:A:T	rs2217240	A	T	A	Hoxd9_MA0913.1	27	0	+	0	0	.
chr10	78351689	78351690	chr10:78351690:A:T	rs73295107	A	T	A	Hoxd9_MA0913.1	29	0	-	0	0	.
chr10	78492022	78492023	chr10:78492023:C:T	rs66949455	C	T	C	Hoxd9_MA0913.1	24	0	+	0	0	.
chr10	78541948	78541949	chr10:78541949:G:T	rs962769	G	T	T	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr10	78541954	78541955	chr10:78541955:G:A	rs76725238	G	A	G	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr10	78757179	78757180	chr10:78757180:C:T	rs12253869	C	T	T	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr10	78772080	78772081	chr10:78772081:T:C	rs72812060	T	C	T	Hoxd9_MA0913.1	3	1	-	8.568625789732518	6.741006849237415	ACAATTAAAT
chr10	78777109	78777110	chr10:78777110:G:A	rs10824639	G	A	G	Hoxd9_MA0913.1	14	0	-	0	0	.
chr10	78810720	78810721	chr10:78810721:C:T	rs10824648	C	T	T	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr10	78859989	78859990	chr10:78859990:C:A	rs772831	C	A	C	Hoxd9_MA0913.1	25	0	+	0	0	.
chr10	78876587	78876588	chr10:78876588:T:C	rs77239032	T	C	T	Hoxd9_MA0913.1	22	0	+	0	0	.
chr10	78939113	78939114	chr10:78939114:T:C	rs7897711	T	C	C	Hoxd9_MA0913.1	13	0	+	0	0	.
chr10	79032650	79032651	chr10:79032651:C:T	rs757577114	C	T	C	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr10	79050784	79050785	chr10:79050785:G:A	rs117246687	G	A	G	Hoxd9_MA0913.1	10	0	-	0	0	.
chr10	79051091	79051092	chr10:79051092:C:A	rs35960994	C	A	C	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr10	79488810	79488811	chr10:79488811:T:C	rs61860464	T	C	.	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr10	79823272	79823273	chr10:79823273:A:G	rs7903231	A	G	-	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr10	80016595	80016596	chr10:80016596:G:A	rs76231309	G	A	G	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr10	80016673	80016674	chr10:80016674:C:T	rs1039247434	C	T	C	Hoxd9_MA0913.1	27	0	+	0	0	.
chr10	80126984	80126985	chr10:80126985:C:T	rs61859979	C	T	C	Hoxd9_MA0913.1	14	0	-	0	0	.
chr10	80175773	80175774	chr10:80175774:C:T	rs12777867	C	T	C	Hoxd9_MA0913.1	22	0	+	0	0	.
chr10	80490815	80490816	chr10:80490816:A:G	rs55943223	A	G	A	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr10	80499139	80499140	chr10:80499140:A:T	chr10:80499140:A:T	A	T	A	Hoxd9_MA0913.1	20	0	+	0	0	.
chr10	80642680	80642681	chr10:80642681:A:C	rs4934387	A	C	C	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr10	80680043	80680044	chr10:80680044:T:C	rs61859394	T	C	T	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr10	80764241	80764242	chr10:80764242:G:A	rs79251425	G	A	G	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr10	80908502	80908503	chr10:80908503:C:T	rs57363554	C	T	C	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr10	81110706	81110707	chr10:81110707:A:T	rs73307769	A	T	T	Hoxd9_MA0913.1	24	0	-	0	0	.
chr10	81450912	81450913	chr10:81450913:C:T	rs197775	C	T	C	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr10	82136503	82136504	chr10:82136504:A:G	rs1080293	A	G	G	Hoxd9_MA0913.1	16	0	-	0	0	.
chr10	82149430	82149431	chr10:82149431:T:G	rs11192703	T	G	G	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr10	82213011	82213012	chr10:82213012:G:A	rs1414767	G	A	G	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr10	82463344	82463345	chr10:82463345:A:G	rs78631392	A	G	A	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr10	83152690	83152691	chr10:83152691:T:C	rs1339831	T	C	T	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr10	83248293	83248294	chr10:83248294:A:T	rs76408500	A	T	A	Hoxd9_MA0913.1	20	0	+	0	0	.
chr10	83273239	83273240	chr10:83273240:C:A	rs10886056	C	A	A	Hoxd9_MA0913.1	26	0	-	0	0	.
chr10	83273242	83273243	chr10:83273243:A:G	rs79247373	A	G	G	Hoxd9_MA0913.1	23	0	-	0	0	.
chr10	83274689	83274690	chr10:83274690:C:T	rs79016769	C	T	C	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr10	83517738	83517739	chr10:83517739:G:A	rs4933924	G	A	G	Hoxd9_MA0913.1	2	1	-	8.594690316172638	3.066015481292197	GCCATTAAAT
chr10	83517752	83517753	chr10:83517753:C:A	rs1324251	C	A	C	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr10	83613694	83613695	chr10:83613695:A:G	rs2181835	A	G	A	Hoxd9_MA0913.1	19	0	-	0	0	.
chr10	83657530	83657531	chr10:83657531:G:A	rs12266607	G	A	G	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr10	83882251	83882252	chr10:83882252:T:A	rs77209379	T	A	T	Hoxd9_MA0913.1	24	0	-	0	0	.
chr10	84395853	84395854	chr10:84395854:T:C	rs11595121	T	C	C	Hoxd9_MA0913.1	26	0	-	0	0	.
chr10	84510637	84510638	chr10:84510638:G:A	rs7905523	G	A	G	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr10	84902206	84902207	chr10:84902207:A:C	rs10887395	A	C	C	Hoxd9_MA0913.1	9	1	-	8.635860738282448	7.4131794346509094	GCCATAAAAT
chr10	84936871	84936872	chr10:84936872:A:G	rs867546	A	G	G	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr10	85189456	85189457	chr10:85189457:A:G	rs1856660	A	G	A	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr10	85524533	85524534	chr10:85524534:T:C	rs115323077	T	C	T	Hoxd9_MA0913.1	4	1	+	7.7976343601680895	4.50550010839311	GCCATAAAAC
chr10	85524549	85524550	chr10:85524550:C:T	rs145970480	C	T	C	Hoxd9_MA0913.1	20	0	+	0	0	.
chr10	86110815	86110816	chr10:86110816:A:G	rs4478929	A	G	G	Hoxd9_MA0913.1	7	1	+	8.60979621184233	1.7706517344879864	ACAATAAAAT
chr10	86390568	86390569	chr10:86390569:A:G	rs186585178	A	G	A	Hoxd9_MA0913.1	3	1	+	7.75646393805828	5.928844997563175	GCCATTAAAC
chr10	86416738	86416739	chr10:86416739:G:T	rs35872285	G	T	G	Hoxd9_MA0913.1	0	1	+	7.973723031895638	4.93658033594277	GCAGTAAAAA
chr10	86452226	86452227	chr10:86452227:A:G	rs78450388	A	G	A	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr10	86628525	86628526	chr10:86628526:T:C	rs4934234	T	C	C	Hoxd9_MA0913.1	19	0	-	0	0	.
chr10	86711869	86711870	chr10:86711870:C:A	rs4934252	C	A	A	Hoxd9_MA0913.1	29	0	-	0	0	.
chr10	86748229	86748230	chr10:86748230:T:C	rs4934259	T	C	T	Hoxd9_MA0913.1	13	0	-	0	0	.
chr10	86798887	86798888	chr10:86798888:A:G	rs189702869	A	G	A	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr10	86889354	86889355	chr10:86889355:A:G	rs10887663	A	G	A	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr10	87706028	87706029	chr10:87706029:G:T	rs12244821	G	T	G	Hoxd9_MA0913.1	20	0	-	0	0	.
chr10	87846281	87846282	chr10:87846282:C:T	rs78386421	C	T	C	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr10	88001938	88001939	chr10:88001939:A:C	rs10788572	A	C	C	Hoxd9_MA0913.1	8	1	+	8.853608248980283	6.853944609327742	ACAATAAAAA
chr10	88028130	88028131	chr10:88028131:T:A	rs116979738	T	A	T	Hoxd9_MA0913.1	25	0	-	0	0	.
chr10	88237874	88237875	chr10:88237875:G:A	rs61855359	G	A	G	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr10	88283148	88283149	chr10:88283149:G:A	rs1946391	G	A	G	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr10	88532554	88532555	chr10:88532555:A:C	rs12360281	A	C	C	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr10	88763689	88763690	chr10:88763690:A:C	rs117784678	A	C	A	Hoxd9_MA0913.1	26	0	+	0	0	.
chr10	88781274	88781275	chr10:88781275:C:T	rs303491	C	T	T	Hoxd9_MA0913.1	27	0	-	0	0	.
chr10	88979610	88979611	chr10:88979611:A:C	rs1571014	A	C	A	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr10	88991580	88991581	chr10:88991581:A:G	rs117702636	A	G	A	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr10	88991582	88991583	chr10:88991583:A:G	rs3740286	A	G	A	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr10	89217758	89217759	chr10:89217759:T:C	rs139340762	T	C	T	Hoxd9_MA0913.1	5	1	-	8.371167929409406	2.1495047765135378	GTAATAAAAC
chr10	89471454	89471455	chr10:89471455:G:A	rs303204	G	A	G	Hoxd9_MA0913.1	28	0	-	0	0	.
chr10	89701314	89701315	chr10:89701315:A:C	rs9325443	A	C	A	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr10	90002717	90002718	chr10:90002718:A:G	rs78423851	A	G	A	Hoxd9_MA0913.1	9	1	+	9.412035922551908	7.945542581782417	GTAATTAAAA
chr10	90089882	90089883	chr10:90089883:C:T	rs111419440	C	T	C	Hoxd9_MA0913.1	1	1	+	8.293678209511443	7.945542581782417	GCAATTAAAG
chr10	90089901	90089902	chr10:90089902:C:A	rs2419365	C	A	A	Hoxd9_MA0913.1	20	0	+	0	0	.
chr10	90150743	90150744	chr10:90150744:A:T	rs72822715	A	T	A	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr10	90791973	90791974	chr10:90791974:C:G	rs113991042	C	G	C	Hoxd9_MA0913.1	13	0	+	0	0	.
chr10	90912806	90912807	chr10:90912807:T:C	rs3939	T	C	T	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr10	91007442	91007443	chr10:91007443:G:A	rs6583744	G	A	G	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr10	91380913	91380914	chr10:91380914:T:C	rs17106633	T	C	T	Hoxd9_MA0913.1	19	0	+	0	0	.
chr10	91405614	91405615	chr10:91405615:A:T	rs7915331	A	T	A	Hoxd9_MA0913.1	3	1	+	8.853608248980283	5.2392683798513	ACAATAAAAA
chr10	91540799	91540800	chr10:91540800:G:T	rs55785441	G	T	G	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr10	91543728	91543729	chr10:91543729:G:A	rs4933659	G	A	A	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr10	91610816	91610817	chr10:91610817:C:T	rs7906741	C	T	C	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr10	91887654	91887655	chr10:91887655:T:C	rs7089122	T	C	T	Hoxd9_MA0913.1	25	0	-	0	0	.
chr10	92192035	92192036	chr10:92192036:G:A	rs17107472	G	A	G	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr10	92436490	92436491	chr10:92436491:A:G	rs35909985	A	G	G	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr10	92754222	92754223	chr10:92754223:T:C	rs34636435	T	C	T	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr10	93141594	93141595	chr10:93141595:A:G	rs7915548	A	G	A	Hoxd9_MA0913.1	12	0	+	0	0	.
chr10	93283989	93283990	chr10:93283990:C:T	rs2797564	C	T	T	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr10	93436204	93436205	chr10:93436205:A:G	rs527954272	A	G	A	Hoxd9_MA0913.1	24	0	-	0	0	.
chr10	93790268	93790269	chr10:93790269:T:G	rs12255855	T	G	T	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr10	94000589	94000590	chr10:94000590:G:C	rs61866026	G	C	G	Hoxd9_MA0913.1	14	0	-	0	0	.
chr10	94027338	94027339	chr10:94027339:G:T	rs10882383	G	T	T	Hoxd9_MA0913.1	1	1	-	8.568625789732518	6.14880741370726	ACAATTAAAT
chr10	94284976	94284977	chr10:94284977:C:A	rs3736901	C	A	C	Hoxd9_MA0913.1	27	0	+	0	0	.
chr10	95445052	95445053	chr10:95445053:A:G	chr10:95445053:A:G	A	G	A	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr10	95469381	95469382	chr10:95469382:C:G	rs541203	C	G	G	Hoxd9_MA0913.1	13	0	+	0	0	.
chr10	96280893	96280894	chr10:96280894:A:T	rs7919588	A	T	T	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr10	96473692	96473693	chr10:96473693:C:T	rs144196548	C	T	c	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr10	96492515	96492516	chr10:96492516:C:T	rs1812319	C	T	C	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr10	96492537	96492538	chr10:96492538:T:C	rs1812318	T	C	C	Hoxd9_MA0913.1	10	0	+	0	0	.
chr10	96585244	96585245	chr10:96585245:T:C	rs535384201	T	C	T	Hoxd9_MA0913.1	8	1	-	8.282172881897674	6.709204304439732	CCAATTAAAA
chr10	96798743	96798744	chr10:96798744:T:A	rs57807455	T	A	T	Hoxd9_MA0913.1	8	1	-	8.568625789732518	7.090295187703467	ACAATTAAAT
chr10	96885128	96885129	chr10:96885129:G:C	rs7080398	G	C	G	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr10	97278804	97278805	chr10:97278805:G:A	rs701821	G	A	G	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr10	97278806	97278807	chr10:97278807:C:A	rs565564465	C	A	C	Hoxd9_MA0913.1	1	1	+	7.932552609785828	5.51273423376057	GCAGTTAAAA
chr10	97338230	97338231	chr10:97338231:A:G	rs75943061	A	G	A	Hoxd9_MA0913.1	6	1	+	9.760171550280933	2.944750882501592	GCAATTAAAA
chr10	97676782	97676783	chr10:97676783:T:C	rs10882984	T	C	T	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr10	97800848	97800849	chr10:97800849:G:A	rs7083673	G	A	A	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr10	98063063	98063064	chr10:98063064:T:C	rs958959589	T	C	T	Hoxd9_MA0913.1	28	0	-	0	0	.
chr10	98063108	98063109	chr10:98063109:C:T	rs554441974	C	T	C	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr10	98141542	98141543	chr10:98141543:A:G	rs80287982	A	G	A	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr10	98349834	98349835	chr10:98349835:T:C	rs74153602	T	C	T	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr10	98404813	98404814	chr10:98404814:C:T	rs4474372	C	T	C	Hoxd9_MA0913.1	27	0	+	0	0	.
chr10	98555060	98555061	chr10:98555061:G:A	rs666243	G	A	A	Hoxd9_MA0913.1	0	1	+	8.838502353310592	7.890768629900132	GCCATTAAAA
chr10	98720787	98720788	chr10:98720788:A:G	rs7913534	A	G	A	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr10	98814640	98814641	chr10:98814641:C:T	rs7088754	C	T	C	Hoxd9_MA0913.1	26	0	-	0	0	.
chr10	99024976	99024977	chr10:99024977:A:C	rs72838806	A	C	A	Hoxd9_MA0913.1	2	1	+	8.32301137036169	7.401342173391351	GCAATAAATA
chr10	99529177	99529178	chr10:99529178:A:G	rs12412391	A	G	A	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr10	99626942	99626943	chr10:99626943:T:A	rs1477144	T	A	t	Hoxd9_MA0913.1	23	0	-	0	0	.
chr10	99628433	99628434	chr10:99628434:T:A	rs1035214	T	A	t	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr10	99694384	99694385	chr10:99694385:A:G	rs2300982	A	G	G	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr10	100183195	100183196	chr10:100183196:T:C	rs75251334	T	C	T	Hoxd9_MA0913.1	6	1	-	8.60979621184233	1.7943755440629887	ACAATAAAAT
chr10	100870925	100870926	chr10:100870926:C:T	rs912475	C	T	T	Hoxd9_MA0913.1	25	0	+	0	0	.
chr10	100879760	100879761	chr10:100879761:T:C	rs10509745	T	C	T	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr10	100895555	100895556	chr10:100895556:T:C	rs11190741	T	C	T	Hoxd9_MA0913.1	26	0	-	0	0	.
chr10	101626066	101626067	chr10:101626067:G:C	rs188899030	G	C	G	Hoxd9_MA0913.1	15	0	+	0	0	.
chr10	102245310	102245311	chr10:102245311:T:C	rs182820028	T	C	T	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr10	102611069	102611070	chr10:102611070:C:T	rs35485301	C	T	C	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr10	102743749	102743750	chr10:102743750:C:T	rs1192941124	C	T	C	Hoxd9_MA0913.1	23	0	-	0	0	.
chr10	102743776	102743777	chr10:102743777:C:G	chr10:102743777:C:G	C	G	C	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr10	102934159	102934160	chr10:102934160:G:A	rs10748836	G	A	A	Hoxd9_MA0913.1	22	0	+	0	0	.
chr10	103035651	103035652	chr10:103035652:C:T	rs7920868	C	T	C	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr10	103045127	103045128	chr10:103045128:A:G	rs138733016	A	G	A	Hoxd9_MA0913.1	15	0	-	0	0	.
chr10	103191889	103191890	chr10:103191890:C:G	rs763405981	C	G	C	Hoxd9_MA0913.1	28	0	-	0	0	.
chr10	103353094	103353095	chr10:103353095:C:A	rs117927731	C	A	-	Hoxd9_MA0913.1	1	1	+	8.60979621184233	6.1899778358170705	ACAATAAAAT
chr10	103540128	103540129	chr10:103540129:A:G	rs6584557	A	G	A	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr10	103572108	103572109	chr10:103572109:A:G	rs60469668	A	G	A	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr10	103599222	103599223	chr10:103599223:A:G	rs2281584	A	G	A	Hoxd9_MA0913.1	4	1	-	8.490366725581566	5.198232473806588	GTCATTAAAA
chr10	103660763	103660764	chr10:103660764:T:G	chr10:103660764:T:G	T	G	T	Hoxd9_MA0913.1	18	0	+	0	0	.
chr10	103832020	103832021	chr10:103832021:T:G	rs11191818	T	G	T	Hoxd9_MA0913.1	23	0	-	0	0	.
chr10	103834981	103834982	chr10:103834982:T:G	rs75501004	T	G	T	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr10	103919292	103919293	chr10:103919293:C:T	rs3850673	C	T	C	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr10	103968521	103968522	chr10:103968522:G:A	rs7097109	G	A	A	Hoxd9_MA0913.1	3	1	+	7.932552609785828	9.760171550280933	GCAGTTAAAA
chr10	104735012	104735013	chr10:104735013:A:C	rs1472050	A	C	A	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr10	104852882	104852883	chr10:104852883:G:C	rs17117755	G	C	G	Hoxd9_MA0913.1	21	0	+	0	0	.
chr10	105132693	105132694	chr10:105132694:G:C	rs1377005	G	C	G	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr10	105844650	105844651	chr10:105844651:A:G	rs1874412	A	G	A	Hoxd9_MA0913.1	1	1	-	9.453206344661718	9.801341972390743	GTAATAAAAA
chr10	105963453	105963454	chr10:105963454:A:T	rs1962423	A	T	A	Hoxd9_MA0913.1	1	1	-	8.490366725581566	6.418683977285333	GTCATTAAAA
chr10	105975007	105975008	chr10:105975008:C:T	rs72815079	C	T	C	Hoxd9_MA0913.1	24	0	-	0	0	.
chr10	105975028	105975029	chr10:105975029:T:C	rs17119914	T	C	T	Hoxd9_MA0913.1	3	1	-	8.838502353310592	7.010883412815486	GCCATTAAAA
chr10	106266086	106266087	chr10:106266087:G:T	rs10786933	G	T	G	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr10	106286350	106286351	chr10:106286351:G:C	rs10748911	G	C	G	Hoxd9_MA0913.1	19	0	+	0	0	.
chr10	106303104	106303105	chr10:106303105:C:T	rs1724045	C	T	C	Hoxd9_MA0913.1	2	1	+	8.246554688443613	2.717879853563173	GTCATTAAAT
chr10	106500517	106500518	chr10:106500518:G:A	rs72821113	G	A	G	Hoxd9_MA0913.1	25	0	-	0	0	.
chr10	106547144	106547145	chr10:106547145:T:C	rs4917476	T	C	T	Hoxd9_MA0913.1	15	0	-	0	0	.
chr10	106747018	106747019	chr10:106747019:C:G	rs9888129	C	G	C	Hoxd9_MA0913.1	14	0	+	0	0	.
chr10	107159939	107159940	chr10:107159940:C:A	rs1337431	C	A	C	Hoxd9_MA0913.1	22	0	+	0	0	.
chr10	107496905	107496906	chr10:107496906:G:A	rs11596449	G	A	A	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr10	107685766	107685767	chr10:107685767:C:T	rs2246222	C	T	T	Hoxd9_MA0913.1	27	0	+	0	0	.
chr10	107733793	107733794	chr10:107733794:T:C	rs11193649	T	C	T	Hoxd9_MA0913.1	5	1	+	8.187202972822991	4.79357162356343	GCAATTAAGA
chr10	107918656	107918657	chr10:107918657:G:A	rs12218253	G	A	G	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr10	108035036	108035037	chr10:108035037:T:G	rs11193858	T	G	T	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr10	108448492	108448493	chr10:108448493:C:T	rs1329504	C	T	C	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr10	108454530	108454531	chr10:108454531:G:A	rs7083687	G	A	g	Hoxd9_MA0913.1	18	0	+	0	0	.
chr10	108766232	108766233	chr10:108766233:T:C	rs1856168	T	C	C	Hoxd9_MA0913.1	3	1	-	8.879672775420401	7.052053834925298	GCCATAAAAA
chr10	109051366	109051367	chr10:109051367:A:T	rs59021785	A	T	A	Hoxd9_MA0913.1	8	1	+	9.453206344661718	7.974875742632667	GTAATAAAAA
chr10	109702214	109702215	chr10:109702215:T:C	rs7093156	T	C	C	Hoxd9_MA0913.1	2	1	-	8.812437826870472	7.1349793854123735	ACAATTAAAA
chr10	109929942	109929943	chr10:109929943:C:T	rs114411158	C	T	C	Hoxd9_MA0913.1	16	0	+	0	0	.
chr10	109965386	109965387	chr10:109965387:A:G	rs12259261	A	G	A	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr10	109978903	109978904	chr10:109978904:A:T	rs9630102	A	T	T	Hoxd9_MA0913.1	23	0	-	0	0	.
chr10	110053196	110053197	chr10:110053197:T:C	rs17126984	T	C	T	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr10	110219992	110219993	chr10:110219993:G:C	rs7911398	G	C	G	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr10	110220010	110220011	chr10:110220011:C:T	rs72830447	C	T	C	Hoxd9_MA0913.1	17	0	+	0	0	.
chr10	110241506	110241507	chr10:110241507:C:T	rs79627845	C	T	C	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr10	110345047	110345048	chr10:110345048:G:A	rs877115	G	A	G	Hoxd9_MA0913.1	21	0	+	0	0	.
chr10	110353275	110353276	chr10:110353276:A:G	rs78873601	A	G	A	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr10	110411543	110411544	chr10:110411544:G:A	rs763499	G	A	A	Hoxd9_MA0913.1	27	0	+	0	0	.
chr10	110461598	110461599	chr10:110461599:G:T	rs78834019	G	T	T	Hoxd9_MA0913.1	27	0	-	0	0	.
chr10	110482779	110482780	chr10:110482780:T:C	rs56170699	T	C	C	Hoxd9_MA0913.1	23	0	-	0	0	.
chr10	110676376	110676377	chr10:110676377:A:T	rs55876748	A	T	A	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr10	110723773	110723774	chr10:110723774:G:C	rs10787272	G	C	C	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr10	111034899	111034900	chr10:111034900:A:G	rs115023760	A	G	A	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr10	111159906	111159907	chr10:111159907:A:G	rs12220858	A	G	A	Hoxd9_MA0913.1	12	0	+	0	0	.
chr10	111200942	111200943	chr10:111200943:C:T	rs17189240	C	T	C	Hoxd9_MA0913.1	13	0	+	0	0	.
chr10	111333549	111333550	chr10:111333550:A:T	rs73358858	A	T	A	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr10	111756391	111756392	chr10:111756392:G:A	rs12413721	G	A	G	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr10	111827630	111827631	chr10:111827631:A:C	rs10787414	A	C	C	Hoxd9_MA0913.1	7	1	+	8.838502353310592	5.54465560159216	GCCATTAAAA
chr10	111915979	111915980	chr10:111915980:T:C	rs4918696	T	C	T	Hoxd9_MA0913.1	21	0	-	0	0	.
chr10	111974143	111974144	chr10:111974144:G:T	rs150650117	G	T	G	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr10	112249253	112249254	chr10:112249254:T:C	rs10787433	T	C	T	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr10	112294813	112294814	chr10:112294814:G:A	rs7075065	G	A	A	Hoxd9_MA0913.1	26	0	+	0	0	.
chr10	112302600	112302601	chr10:112302601:T:C	rs188900596	T	C	T	Hoxd9_MA0913.1	14	0	-	0	0	.
chr10	112333592	112333593	chr10:112333593:G:C	rs2419625	G	C	C	Hoxd9_MA0913.1	28	0	+	0	0	.
chr10	112407982	112407983	chr10:112407983:A:G	rs3780955	A	G	G	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr10	112524883	112524884	chr10:112524884:A:T	rs7081965	A	T	T	Hoxd9_MA0913.1	2	1	+	7.7299109947576845	1.2795669629069029	GCAGTAAAAT
chr10	112588706	112588707	chr10:112588707:C:T	rs11818906	C	T	T	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr10	112658991	112658992	chr10:112658992:A:G	rs77789673	A	G	A	Hoxd9_MA0913.1	14	0	+	0	0	.
chr10	112741925	112741926	chr10:112741926:A:G	rs7075671	A	G	A	Hoxd9_MA0913.1	6	1	+	8.334848631621252	1.5194279638419104	GCAATAAAAG
chr10	112962014	112962015	chr10:112962015:A:G	rs116313472	A	G	A	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr10	112998589	112998590	chr10:112998590:C:T	rs7903146	C	T	T	Hoxd9_MA0913.1	16	0	-	0	0	.
chr10	113363043	113363044	chr10:113363044:T:C	rs17130313	T	C	T	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr10	113646564	113646565	chr10:113646565:C:T	rs4578316	C	T	C	Hoxd9_MA0913.1	22	0	+	0	0	.
chr10	113680565	113680566	chr10:113680566:A:G	rs1274049042	A	G	A	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr10	113731470	113731471	chr10:113731471:G:A	rs17090919	G	A	G	Hoxd9_MA0913.1	12	0	+	0	0	.
chr10	113789155	113789156	chr10:113789156:A:T	rs11596886	A	T	A	Hoxd9_MA0913.1	9	1	+	9.453206344661718	9.209394307523764	GTAATAAAAA
chr10	113824849	113824850	chr10:113824850:T:G	rs4918876	T	G	T	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr10	113854647	113854648	chr10:113854648:T:G	rs951898234	T	G	T	Hoxd9_MA0913.1	23	0	-	0	0	.
chr10	113954630	113954631	chr10:113954631:C:T	rs11196557	C	T	T	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr10	113960561	113960562	chr10:113960562:T:G	rs238761	T	G	G	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr10	114172492	114172493	chr10:114172493:C:T	rs117381581	C	T	C	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr10	114172505	114172506	chr10:114172506:T:C	rs35517495	T	C	T	Hoxd9_MA0913.1	8	1	+	8.32301137036169	7.801678332738202	GCAATAAATA
chr10	114594436	114594437	chr10:114594437:T:G	rs2483583	T	G	T	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr10	114819641	114819642	chr10:114819642:A:G	rs74158065	A	G	A	Hoxd9_MA0913.1	11	0	-	0	0	.
chr10	115445735	115445736	chr10:115445736:G:A	rs10787573	G	A	A	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr10	115761485	115761486	chr10:115761486:C:T	rs2960715	C	T	C	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr10	115977216	115977217	chr10:115977217:A:G	rs180701	A	G	G	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr10	116136092	116136093	chr10:116136093:A:G	rs3781532	A	G	A	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr10	116271742	116271743	chr10:116271743:C:G	rs145892634	C	G	C	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr10	116310589	116310590	chr10:116310590:T:C	rs79416038	T	C	T	Hoxd9_MA0913.1	21	0	-	0	0	.
chr10	116437216	116437217	chr10:116437217:G:A	rs10885932	G	A	A	Hoxd9_MA0913.1	1	1	-	7.984561357794846	7.636425730065822	GCAATAAAGT
chr10	116503244	116503245	chr10:116503245:C:T	rs4751605	C	T	c	Hoxd9_MA0913.1	27	0	-	0	0	.
chr10	116695407	116695408	chr10:116695408:G:C	rs3010469	G	C	G	Hoxd9_MA0913.1	24	0	+	0	0	.
chr10	116695408	116695409	chr10:116695409:T:C	rs3010470	T	C	T	Hoxd9_MA0913.1	25	0	+	0	0	.
chr10	116891484	116891485	chr10:116891485:C:T	rs10510025	C	T	C	Hoxd9_MA0913.1	26	0	+	0	0	.
chr10	116952764	116952765	chr10:116952765:A:C	rs74895127	A	C	A	Hoxd9_MA0913.1	5	1	-	7.932552609785828	1.7520598789997708	GCAGTTAAAA
chr10	117265778	117265779	chr10:117265779:A:G	rs7095278	A	G	A	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr10	117808621	117808622	chr10:117808622:G:A	rs17096846	G	A	G	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr10	117931887	117931888	chr10:117931888:T:C	rs11198185	T	C	T	Hoxd9_MA0913.1	9	1	-	7.801678332738202	6.335184991968711	GCAATAAACA
chr10	118669514	118669515	chr10:118669515:C:A	rs74159253	C	A	C	Hoxd9_MA0913.1	11	0	+	0	0	.
chr10	118716397	118716398	chr10:118716398:C:T	rs12416232	C	T	C	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr10	118730032	118730033	chr10:118730033:T:C	rs7089920	T	C	T	Hoxd9_MA0913.1	6	1	-	8.334848631621252	1.5194279638419104	GCAATAAAAG
chr10	118737668	118737669	chr10:118737669:C:T	rs7905354	C	T	T	Hoxd9_MA0913.1	19	0	+	0	0	.
chr10	118767902	118767903	chr10:118767903:A:G	rs74488651	A	G	A	Hoxd9_MA0913.1	21	0	-	0	0	.
chr10	118856096	118856097	chr10:118856097:A:G	rs4752220	A	G	A	Hoxd9_MA0913.1	17	0	+	0	0	.
chr10	118966329	118966330	chr10:118966330:A:C	rs145715826	A	C	A	Hoxd9_MA0913.1	20	0	-	0	0	.
chr10	119209138	119209139	chr10:119209139:C:T	rs117454191	C	T	C	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr10	119322397	119322398	chr10:119322398:C:T	chr10:119322398:C:T	C	T	C	Hoxd9_MA0913.1	17	0	+	0	0	.
chr10	119402582	119402583	chr10:119402583:T:C	rs1110296	T	C	T	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr10	119551535	119551536	chr10:119551536:G:C	rs10510057	G	C	G	Hoxd9_MA0913.1	19	0	+	0	0	.
chr10	119569563	119569564	chr10:119569564:C:A	rs7901599	C	A	C	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr10	120116208	120116209	chr10:120116209:C:T	rs7894011	C	T	T	Hoxd9_MA0913.1	17	0	+	0	0	.
chr10	120177634	120177635	chr10:120177635:G:A	rs1929700	G	A	A	Hoxd9_MA0913.1	0	1	+	9.801341972390743	8.853608248980283	GCAATAAAAA
chr10	120177662	120177663	chr10:120177663:A:G	rs12766993	A	G	A	Hoxd9_MA0913.1	28	0	+	0	0	.
chr10	120393036	120393037	chr10:120393037:C:T	rs149100820	C	T	C	Hoxd9_MA0913.1	28	0	-	0	0	.
chr10	120433414	120433415	chr10:120433415:G:A	rs36108282	G	A	G	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr10	121033485	121033486	chr10:121033486:T:G	chr10:121033486:T:G	T	G	T	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr10	121033494	121033495	chr10:121033495:T:G	rs74158281	T	G	T	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr10	121217581	121217582	chr10:121217582:T:G	rs1907227	T	G	T	Hoxd9_MA0913.1	27	0	-	0	0	.
chr10	121245288	121245289	chr10:121245289:A:G	rs2201024	A	G	a	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr10	121280287	121280288	chr10:121280288:T:G	rs10788163	T	G	G	Hoxd9_MA0913.1	11	0	+	0	0	.
chr10	121336953	121336954	chr10:121336954:C:G	rs10466213	C	G	G	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr10	121381146	121381147	chr10:121381147:A:C	rs9420328	A	C	A	Hoxd9_MA0913.1	2	1	+	9.55752993525279	8.635860738282448	GCAATAAAAT
chr10	121490733	121490734	chr10:121490734:G:A	rs2912795	G	A	G	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr10	121490763	121490764	chr10:121490764:C:T	rs35401699	C	T	c	Hoxd9_MA0913.1	23	0	+	0	0	.
chr10	121525808	121525809	chr10:121525809:G:A	rs41295529	G	A	G	Hoxd9_MA0913.1	24	0	+	0	0	.
chr10	121568358	121568359	chr10:121568359:G:C	rs10510096	G	C	G	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr10	121656075	121656076	chr10:121656076:T:C	rs11200059	T	C	T	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr10	122007570	122007571	chr10:122007571:T:C	rs117910143	T	C	T	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr10	122052769	122052770	chr10:122052770:C:G	chr10:122052770:C:G	C	G	C	Hoxd9_MA0913.1	23	0	+	0	0	.
chr10	122060399	122060400	chr10:122060400:T:G	rs150991450	T	G	T	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr10	122117503	122117504	chr10:122117504:T:C	rs2421006	T	C	C	Hoxd9_MA0913.1	11	0	-	0	0	.
chr10	122247592	122247593	chr10:122247593:A:T	rs911783	A	T	T	Hoxd9_MA0913.1	29	0	+	0	0	.
chr10	122390794	122390795	chr10:122390795:C:T	rs12242543	C	T	C	Hoxd9_MA0913.1	24	0	+	0	0	.
chr10	122488725	122488726	chr10:122488726:C:G	rs12267142	C	G	C	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr10	122496061	122496062	chr10:122496062:C:G	rs77571505	C	G	G	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr10	122774539	122774540	chr10:122774540:C:T	rs113364535	C	T	C	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr10	122774548	122774549	chr10:122774549:A:G	rs7077831	A	G	A	Hoxd9_MA0913.1	3	1	+	8.282172881897674	6.454553941402571	CCAATTAAAA
chr10	123299984	123299985	chr10:123299985:T:C	rs4980276	T	C	T	Hoxd9_MA0913.1	23	0	-	0	0	.
chr10	123453939	123453940	chr10:123453940:G:A	rs565526155	G	A	G	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr10	123520146	123520147	chr10:123520147:A:C	rs78130050	A	C	A	Hoxd9_MA0913.1	12	0	-	0	0	.
chr10	123537778	123537779	chr10:123537779:A:G	rs10510132	A	G	A	Hoxd9_MA0913.1	25	0	-	0	0	.
chr10	123794004	123794005	chr10:123794005:A:G	rs193299327	A	G	A	Hoxd9_MA0913.1	9	1	+	8.812437826870472	7.34594448610098	ACAATTAAAA
chr10	123794566	123794567	chr10:123794567:G:A	rs375545289	G	A	G	Hoxd9_MA0913.1	14	0	-	0	0	.
chr10	123842458	123842459	chr10:123842459:G:A	rs17679897	G	A	G	Hoxd9_MA0913.1	0	1	+	8.531537147691377	7.583803424280916	GTCATAAAAA
chr10	123858516	123858517	chr10:123858517:G:A	rs77287275	G	A	G	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr10	123994996	123994997	chr10:123994997:A:G	rs73367652	A	G	G	Hoxd9_MA0913.1	19	0	+	0	0	.
chr10	124146849	124146850	chr10:124146850:T:G	rs927531152	T	G	G	Hoxd9_MA0913.1	12	0	-	0	0	.
chr10	124186996	124186997	chr10:124186997:A:G	rs1027866902	A	G	A	Hoxd9_MA0913.1	21	0	+	0	0	.
chr10	124214495	124214496	chr10:124214496:A:G	rs4076582	A	G	A	Hoxd9_MA0913.1	6	1	+	7.801678332738202	0.9862576649588617	GCAATAAACA
chr10	124301404	124301405	chr10:124301405:G:A	rs7084636	G	A	G	Hoxd9_MA0913.1	14	0	-	0	0	.
chr10	124323365	124323366	chr10:124323366:A:C	chr10:124323366:A:C	A	C	A	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr10	124448530	124448531	chr10:124448531:A:G	rs75530062	A	G	A	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr10	124556358	124556359	chr10:124556359:G:T	rs7897047	G	T	G	Hoxd9_MA0913.1	16	0	-	0	0	.
chr10	124568987	124568988	chr10:124568988:G:A	rs61870231	G	A	G	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr10	124864996	124864997	chr10:124864997:C:T	rs76995699	C	T	C	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr10	124865001	124865002	chr10:124865002:G:A	rs2015178	G	A	G	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr10	125072964	125072965	chr10:125072965:C:T	rs3889706	C	T	C	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr10	125709852	125709853	chr10:125709853:G:A	rs60419287	G	A	G	Hoxd9_MA0913.1	2	1	-	8.838502353310592	3.30982751843015	GCCATTAAAA
chr10	125822757	125822758	chr10:125822758:C:T	rs377109854	C	T	C	Hoxd9_MA0913.1	23	0	-	0	0	.
chr10	125897077	125897078	chr10:125897078:G:A	rs79778101	G	A	G	Hoxd9_MA0913.1	19	0	+	0	0	.
chr10	126018153	126018154	chr10:126018154:A:G	rs10794054	A	G	G	Hoxd9_MA0913.1	5	1	+	9.209394307523764	2.9877311546278964	GTAATAAAAT
chr10	126087392	126087393	chr10:126087393:A:G	rs1278364	A	G	G	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr10	126172031	126172032	chr10:126172032:G:A	rs75917702	G	A	A	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr10	126250828	126250829	chr10:126250829:G:A	rs4962532	G	A	A	Hoxd9_MA0913.1	19	0	-	0	0	.
chr10	126250845	126250846	chr10:126250846:T:C	rs76188090	T	C	T	Hoxd9_MA0913.1	2	1	-	9.453206344661718	7.775747903203619	GTAATAAAAA
chr10	126277411	126277412	chr10:126277412:A:G	rs2886686	A	G	A	Hoxd9_MA0913.1	9	1	+	8.2283733949328	6.761880054163308	GCAATAAAGA
chr10	126456348	126456349	chr10:126456349:G:A	rs12246117	G	A	G	Hoxd9_MA0913.1	0	1	+	7.7976343601680895	6.84990063675763	GCCATAAAAC
chr10	126518625	126518626	chr10:126518626:C:G	rs111388203	C	G	C	Hoxd9_MA0913.1	29	0	+	0	0	.
chr10	126521389	126521390	chr10:126521390:G:T	rs4962342	G	T	T	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr10	126638994	126638995	chr10:126638995:C:G	rs11592979	C	G	C	Hoxd9_MA0913.1	28	0	+	0	0	.
chr10	126665114	126665115	chr10:126665115:T:C	rs12412594	T	C	T	Hoxd9_MA0913.1	27	0	-	0	0	.
chr10	126705878	126705879	chr10:126705879:G:A	rs7099814	G	A	G	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr10	127052010	127052011	chr10:127052011:C:T	rs9418724	C	T	C	Hoxd9_MA0913.1	11	0	-	0	0	.
chr10	127090514	127090515	chr10:127090515:T:A	rs11016124	T	A	T	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr10	127117141	127117142	chr10:127117142:T:C	rs12778512	T	C	C	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr10	127203721	127203722	chr10:127203722:G:A	rs12246104	G	A	G	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr10	127833876	127833877	chr10:127833877:T:C	rs486238	T	C	T	Hoxd9_MA0913.1	16	0	+	0	0	.
chr10	127946390	127946391	chr10:127946391:A:G	rs7906042	A	G	G	Hoxd9_MA0913.1	18	0	-	0	0	.
chr10	128419139	128419140	chr10:128419140:T:C	rs11016236	T	C	T	Hoxd9_MA0913.1	4	1	+	7.801678332738202	4.509544080963223	GCAATAAACA
chr10	128509557	128509558	chr10:128509558:A:G	rs1328466	A	G	A	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr10	128628712	128628713	chr10:128628713:G:T	rs10764796	G	T	G	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr10	128722098	128722099	chr10:128722099:T:C	rs73379473	T	C	C	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr10	128780617	128780618	chr10:128780618:G:C	rs517409	G	C	G	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr10	128882597	128882598	chr10:128882598:C:T	rs79348487	C	T	C	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr10	128998805	128998806	chr10:128998806:G:C	rs7099092	G	C	C	Hoxd9_MA0913.1	8	1	+	8.187202972822991	7.760507910628393	GCAATTAAGA
chr10	128998818	128998819	chr10:128998819:C:G	rs7100073	C	G	G	Hoxd9_MA0913.1	21	0	+	0	0	.
chr10	129221605	129221606	chr10:129221606:A:G	rs55832851	A	G	G	Hoxd9_MA0913.1	13	0	-	0	0	.
chr10	129272080	129272081	chr10:129272081:G:T	rs1019377	G	T	G	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr10	129525641	129525642	chr10:129525642:T:A	rs10741195	T	A	T	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr10	129600469	129600470	chr10:129600470:A:C	rs534430	A	C	C	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr10	129708244	129708245	chr10:129708245:T:C	rs11593531	T	C	C	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr10	129708281	129708282	chr10:129708282:G:A	rs2282163	G	A	G	Hoxd9_MA0913.1	18	0	+	0	0	.
chr10	129759668	129759669	chr10:129759669:G:A	rs3793905	G	A	G	Hoxd9_MA0913.1	22	0	-	0	0	.
chr10	129790498	129790499	chr10:129790499:A:C	rs11016933	A	C	A	Hoxd9_MA0913.1	5	1	+	9.55752993525279	6.122728163883419	GCAATAAAAT
chr10	129790501	129790502	chr10:129790502:A:C	rs11016934	A	C	A	Hoxd9_MA0913.1	8	1	+	9.55752993525279	7.557866295600249	GCAATAAAAT
chr10	129887407	129887408	chr10:129887408:T:C	rs1334011	T	C	T	Hoxd9_MA0913.1	23	0	+	0	0	.
chr10	129972355	129972356	chr10:129972356:G:A	rs12264251	G	A	G	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr10	129981365	129981366	chr10:129981366:C:T	rs10829672	C	T	C	Hoxd9_MA0913.1	18	0	+	0	0	.
chr10	129981374	129981375	chr10:129981375:A:G	rs642073	A	G	G	Hoxd9_MA0913.1	27	0	+	0	0	.
chr10	130054040	130054041	chr10:130054041:C:T	rs1016315	C	T	C	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr10	130423170	130423171	chr10:130423171:G:A	rs7082179	G	A	G	Hoxd9_MA0913.1	0	1	+	8.490366725581566	7.542633002171106	GTCATTAAAA
chr10	130489106	130489107	chr10:130489107:G:C	rs407413	G	C	G	Hoxd9_MA0913.1	27	0	+	0	0	.
chr10	130718863	130718864	chr10:130718864:A:G	rs7067867	A	G	G	Hoxd9_MA0913.1	15	0	-	0	0	.
chr10	130935178	130935179	chr10:130935179:C:T	rs1560805	C	T	T	Hoxd9_MA0913.1	1	1	+	8.60979621184233	8.261660584113304	ACAATAAAAT
chr10	130935187	130935188	chr10:130935188:C:G	rs1560806	C	G	G	Hoxd9_MA0913.1	10	0	+	0	0	.
chr10	131332600	131332601	chr10:131332601:A:G	rs11017884	A	G	A	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr10	131365989	131365990	chr10:131365990:C:T	rs76570136	C	T	C	Hoxd9_MA0913.1	24	0	+	0	0	.
chr10	131445599	131445600	chr10:131445600:G:A	rs11595691	G	A	G	Hoxd9_MA0913.1	12	0	+	0	0	.
chr10	131455320	131455321	chr10:131455321:G:C	rs3123186	G	C	C	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr10	131455338	131455339	chr10:131455339:C:G	rs3123185	C	G	G	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr10	131655165	131655166	chr10:131655166:T:G	rs55922632	T	G	G	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr10	131930530	131930531	chr10:131930531:T:C	rs58142972	T	C	T	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr10	131980309	131980310	chr10:131980310:G:C	rs553809400	G	C	G	Hoxd9_MA0913.1	2	1	-	8.635860738282448	7.8800714937946905	GCCATAAAAT
chr10	132027534	132027535	chr10:132027535:G:C	rs2026781	G	C	C	Hoxd9_MA0913.1	14	0	-	0	0	.
chr10	132097220	132097221	chr10:132097221:T:C	rs12573615	T	C	t	Hoxd9_MA0913.1	19	0	+	0	0	.
chr10	132097229	132097230	chr10:132097230:C:G	rs12220477	C	G	c	Hoxd9_MA0913.1	28	0	+	0	0	.
chr10	132099333	132099334	chr10:132099334:G:A	rs2172129	G	A	g	Hoxd9_MA0913.1	10	0	+	0	0	.
chr10	132414323	132414324	chr10:132414324:A:C	rs75725086	A	C	A	Hoxd9_MA0913.1	5	1	-	8.490366725581566	2.3098739947955087	GTCATTAAAA
chr10	132523635	132523636	chr10:132523636:C:T	rs4272721	C	T	T	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr10	132556268	132556269	chr10:132556269:C:T	rs138118299	C	T	C	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr10	132593334	132593335	chr10:132593335:G:A	rs2819714	G	A	A	Hoxd9_MA0913.1	23	0	-	0	0	.
chr10	132750565	132750566	chr10:132750566:G:A	rs3902976	G	A	G	Hoxd9_MA0913.1	1	1	-	8.853608248980283	8.505472621251258	ACAATAAAAA
chr10	132787981	132787982	chr10:132787982:G:A	rs545697909	G	A	g	Hoxd9_MA0913.1	26	0	-	0	0	.
chr10	132967478	132967479	chr10:132967479:C:T	rs12776902	C	T	T	Hoxd9_MA0913.1	0	1	-	8.719303557138431	7.7715698337279715	GCAATAAAAC
chr10	132990310	132990311	chr10:132990311:C:T	rs560947923	C	T	C	Hoxd9_MA0913.1	23	0	-	0	0	.
chr10	132993759	132993760	chr10:132993760:G:A	rs61860515	G	A	G	Hoxd9_MA0913.1	24	0	-	0	0	.
chr10	132993767	132993768	chr10:132993768:C:T	rs12761968	C	T	C	Hoxd9_MA0913.1	16	0	-	0	0	.
chr10	133145589	133145590	chr10:133145590:C:T	rs12771359	C	T	C	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr11	338972	338973	chr11:338973:C:G	rs764402915	C	G	-	Hoxd9_MA0913.1	26	0	-	0	0	.
chr11	795979	795980	chr11:795980:A:C	rs116297624	A	C	A	Hoxd9_MA0913.1	8	1	+	8.635860738282448	6.636197098629907	GCCATAAAAT
chr11	1149495	1149496	chr11:1149496:G:A	rs55754006	G	A	G	Hoxd9_MA0913.1	29	0	-	0	0	.
chr11	1206405	1206406	chr11:1206406:G:C	rs28449732	G	C	C	Hoxd9_MA0913.1	23	0	-	0	0	.
chr11	1206444	1206445	chr11:1206445:C:T	rs55900977	C	T	C	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr11	1652791	1652792	chr11:1652792:T:A	rs28757568	T	A	t	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr11	1652792	1652793	chr11:1652793:A:T	rs1565370	A	T	a	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr11	1673090	1673091	chr11:1673091:A:G	rs57564260	A	G	-	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr11	1675618	1675619	chr11:1675619:C:T	rs2334499	C	T	-	Hoxd9_MA0913.1	28	0	+	0	0	.
chr11	2213459	2213460	chr11:2213460:A:G	rs10840606	A	G	A	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr11	2222660	2222661	chr11:2222661:G:A	rs10831574	G	A	G	Hoxd9_MA0913.1	29	0	+	0	0	.
chr11	2247990	2247991	chr11:2247991:A:G	rs10741553	A	G	G	Hoxd9_MA0913.1	15	0	+	0	0	.
chr11	2261477	2261478	chr11:2261478:A:G	rs76705795	A	G	A	Hoxd9_MA0913.1	24	0	-	0	0	.
chr11	2261494	2261495	chr11:2261495:T:C	rs1548427	T	C	T	Hoxd9_MA0913.1	7	1	-	8.281840948251881	1.442696470897538	GCAATTAATA
chr11	2261502	2261503	chr11:2261503:A:C	rs11021988	A	C	A	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr11	2350159	2350160	chr11:2350160:C:T	rs800152	C	T	T	Hoxd9_MA0913.1	22	0	-	0	0	.
chr11	2350169	2350170	chr11:2350170:A:C	rs1604343	A	C	A	Hoxd9_MA0913.1	12	0	-	0	0	.
chr11	2385747	2385748	chr11:2385748:G:A	rs74048500	G	A	G	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr11	2586374	2586375	chr11:2586375:C:T	chr11:2586375:C:T	C	T	C	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr11	2713331	2713332	chr11:2713332:G:A	rs146188913	G	A	G	Hoxd9_MA0913.1	0	1	+	8.879672775420401	7.931939052009941	GCCATAAAAA
chr11	3022427	3022428	chr11:3022428:A:G	rs7130841	A	G	A	Hoxd9_MA0913.1	21	0	+	0	0	.
chr11	3428268	3428269	chr11:3428269:A:G	rs7116682	A	G	a	Hoxd9_MA0913.1	20	0	-	0	0	.
chr11	3579644	3579645	chr11:3579645:C:T	rs11028236	C	T	-	Hoxd9_MA0913.1	24	0	+	0	0	.
chr11	3939524	3939525	chr11:3939525:A:G	rs61897166	A	G	A	Hoxd9_MA0913.1	14	0	+	0	0	.
chr11	3950463	3950464	chr11:3950464:A:G	rs116621460	A	G	A	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr11	3953622	3953623	chr11:3953623:T:C	rs73427533	T	C	T	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr11	4020253	4020254	chr11:4020254:A:C	rs11827750	A	C	A	Hoxd9_MA0913.1	5	1	+	7.801678332738202	4.366876561368833	GCAATAAACA
chr11	4045167	4045168	chr11:4045168:G:A	rs10767811	G	A	G	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr11	4578543	4578544	chr11:4578544:A:G	rs17313216	A	G	A	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr11	4619771	4619772	chr11:4619772:C:T	rs73403432	C	T	C	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr11	4672216	4672217	chr11:4672217:G:A	rs12417964	G	A	A	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr11	4699973	4699974	chr11:4699974:T:A	rs1032446	T	A	A	Hoxd9_MA0913.1	26	0	-	0	0	.
chr11	4699996	4699997	chr11:4699997:T:C	rs12577711	T	C	T	Hoxd9_MA0913.1	3	1	-	8.60979621184233	6.782177271347225	ACAATAAAAT
chr11	5565021	5565022	chr11:5565022:A:C	rs10742719	A	C	a	Hoxd9_MA0913.1	14	0	-	0	0	.
chr11	5815525	5815526	chr11:5815526:A:T	rs10838672	A	T	T	Hoxd9_MA0913.1	9	1	+	8.853608248980283	8.60979621184233	ACAATAAAAA
chr11	5982231	5982232	chr11:5982232:C:T	rs1006302563	C	T	C	Hoxd9_MA0913.1	0	1	-	7.75646393805828	6.808730214647819	GCCATTAAAC
chr11	6011626	6011627	chr11:6011627:G:A	rs7127525	G	A	g	Hoxd9_MA0913.1	2	1	-	7.4131794346509094	1.8845045997704688	GCCATAAAAG
chr11	6094243	6094244	chr11:6094244:A:G	rs10839476	A	G	A	Hoxd9_MA0913.1	4	1	-	8.60979621184233	5.317661960067349	ACAATAAAAT
chr11	6205852	6205853	chr11:6205853:C:T	rs10742968	C	T	T	Hoxd9_MA0913.1	15	0	-	0	0	.
chr11	6389192	6389193	chr11:6389193:T:C	rs72896262	T	C	T	Hoxd9_MA0913.1	13	0	-	0	0	.
chr11	6486893	6486894	chr11:6486894:G:C	rs2256920	G	C	C	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr11	6677175	6677176	chr11:6677176:T:C	rs142644037	T	C	T	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr11	7060902	7060903	chr11:7060903:C:T	rs35898585	C	T	C	Hoxd9_MA0913.1	17	0	-	0	0	.
chr11	7115049	7115050	chr11:7115050:G:T	rs72851283	G	T	G	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr11	7281532	7281533	chr11:7281533:G:A	rs16924319	G	A	G	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr11	7574945	7574946	chr11:7574946:T:G	chr11:7574946:T:G	T	G	T	Hoxd9_MA0913.1	25	0	+	0	0	.
chr11	7590590	7590591	chr11:7590591:A:G	rs12223163	A	G	A	Hoxd9_MA0913.1	14	0	-	0	0	.
chr11	7901564	7901565	chr11:7901565:G:A	rs1842826	G	A	G	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr11	8020914	8020915	chr11:8020915:T:C	rs7113327	T	C	C	Hoxd9_MA0913.1	12	0	+	0	0	.
chr11	8074417	8074418	chr11:8074418:G:C	rs4758283	G	C	C	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr11	8086208	8086209	chr11:8086209:T:A	rs73398926	T	A	T	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr11	8688696	8688697	chr11:8688697:G:T	rs10769941	G	T	T	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr11	9160572	9160573	chr11:9160573:T:C	rs925185075	T	C	T	Hoxd9_MA0913.1	3	1	-	8.568625789732518	6.741006849237415	ACAATTAAAT
chr11	9232257	9232258	chr11:9232258:T:C	rs34729888	T	C	T	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr11	9252370	9252371	chr11:9252371:A:G	rs7926864	A	G	G	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr11	9361902	9361903	chr11:9361903:T:C	rs7944535	T	C	N	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr11	9361922	9361923	chr11:9361923:T:A	rs72851834	T	A	t	Hoxd9_MA0913.1	11	0	+	0	0	.
chr11	9561109	9561110	chr11:9561110:T:G	rs72854173	T	G	T	Hoxd9_MA0913.1	21	0	+	0	0	.
chr11	9609266	9609267	chr11:9609267:G:A	rs7950271	G	A	G	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr11	9701845	9701846	chr11:9701846:A:G	rs12789429	A	G	a	Hoxd9_MA0913.1	23	0	-	0	0	.
chr11	9703289	9703290	chr11:9703290:C:T	rs2572940	C	T	C	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr11	9906194	9906195	chr11:9906195:G:C	rs1458615281	G	C	G	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr11	10197314	10197315	chr11:10197315:C:T	rs11042663	C	T	T	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr11	10266321	10266322	chr11:10266322:G:A	rs61889817	G	A	G	Hoxd9_MA0913.1	0	1	+	8.293678209511443	7.34594448610098	GCAATTAAAG
chr11	10273292	10273293	chr11:10273293:C:G	rs7108358	C	G	C	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr11	10273305	10273306	chr11:10273306:C:T	rs117065946	C	T	c	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr11	10418888	10418889	chr11:10418889:T:C	rs72856163	T	C	T	Hoxd9_MA0913.1	11	0	-	0	0	.
chr11	10518382	10518383	chr11:10518383:C:T	rs12279850	C	T	C	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr11	10538801	10538802	chr11:10538802:C:T	rs3781862	C	T	T	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr11	10669889	10669890	chr11:10669890:G:A	rs903824	G	A	G	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr11	10728984	10728985	chr11:10728985:G:A	rs1473538	G	A	A	Hoxd9_MA0913.1	19	0	+	0	0	.
chr11	10736255	10736256	chr11:10736256:T:G	rs11042941	T	G	T	Hoxd9_MA0913.1	18	0	-	0	0	.
chr11	10792065	10792066	chr11:10792066:T:G	rs7103582	T	G	T	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr11	10844479	10844480	chr11:10844480:C:T	rs12418898	C	T	T	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr11	10884296	10884297	chr11:10884297:G:A	rs12275453	G	A	A	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr11	10884314	10884315	chr11:10884315:G:T	rs7101508	G	T	G	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr11	10899948	10899949	chr11:10899949:C:T	rs189134569	C	T	C	Hoxd9_MA0913.1	0	1	-	8.287725110553424	7.3399913871429625	GTCATAAAAT
chr11	10899964	10899965	chr11:10899965:A:G	rs7932891	A	G	G	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr11	11060702	11060703	chr11:11060703:C:T	rs7948819	C	T	C	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr11	11168039	11168040	chr11:11168040:C:G	rs68012483	C	G	C	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr11	11189574	11189575	chr11:11189575:G:A	rs10500740	G	A	A	Hoxd9_MA0913.1	20	0	-	0	0	.
chr11	11189597	11189598	chr11:11189598:G:A	rs10500741	G	A	G	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr11	11210502	11210503	chr11:11210503:G:A	rs7113748	G	A	A	Hoxd9_MA0913.1	26	0	-	0	0	.
chr11	11210503	11210504	chr11:11210504:C:G	rs7114717	C	G	G	Hoxd9_MA0913.1	25	0	-	0	0	.
chr11	11266673	11266674	chr11:11266674:A:T	rs12287695	A	T	A	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr11	11296741	11296742	chr11:11296742:A:G	rs11021765	A	G	A	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr11	11363911	11363912	chr11:11363912:T:C	rs7946518	T	C	T	Hoxd9_MA0913.1	25	0	+	0	0	.
chr11	11410726	11410727	chr11:11410727:G:A	rs76504964	G	A	G	Hoxd9_MA0913.1	17	0	-	0	0	.
chr11	11584204	11584205	chr11:11584205:G:A	rs61870386	G	A	G	Hoxd9_MA0913.1	14	0	+	0	0	.
chr11	11710456	11710457	chr11:11710457:C:A	rs16909992	C	A	C	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr11	11748622	11748623	chr11:11748623:T:C	rs12225817	T	C	C	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr11	11808673	11808674	chr11:11808674:G:A	rs734461	G	A	A	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr11	11947866	11947867	chr11:11947867:G:A	rs72857637	G	A	G	Hoxd9_MA0913.1	10	0	+	0	0	.
chr11	11988021	11988022	chr11:11988022:C:T	rs16910295	C	T	C	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr11	12062627	12062628	chr11:12062628:G:A	rs3947501	G	A	G	Hoxd9_MA0913.1	29	0	-	0	0	.
chr11	12167209	12167210	chr11:12167210:G:T	rs140974709	G	T	G	Hoxd9_MA0913.1	13	0	+	0	0	.
chr11	12201799	12201800	chr11:12201800:G:A	rs72866056	G	A	G	Hoxd9_MA0913.1	0	1	+	8.635860738282448	7.688127014871988	GCCATAAAAT
chr11	12201810	12201811	chr11:12201811:C:T	rs901283	C	T	C	Hoxd9_MA0913.1	11	0	+	0	0	.
chr11	12361524	12361525	chr11:12361525:G:A	rs3812756	G	A	g	Hoxd9_MA0913.1	3	1	+	7.973723031895638	9.801341972390743	GCAGTAAAAA
chr11	12414482	12414483	chr11:12414483:C:G	rs4491200	C	G	G	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr11	12430329	12430330	chr11:12430330:T:C	rs1344614	T	C	T	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr11	12487587	12487588	chr11:12487588:A:C	rs553726331	A	C	A	Hoxd9_MA0913.1	27	0	+	0	0	.
chr11	12565404	12565405	chr11:12565405:G:T	rs4457727	G	T	G	Hoxd9_MA0913.1	25	0	+	0	0	.
chr11	12565405	12565406	chr11:12565406:G:A	rs12276360	G	A	G	Hoxd9_MA0913.1	26	0	+	0	0	.
chr11	12574585	12574586	chr11:12574586:T:C	rs117407262	T	C	T	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr11	12599393	12599394	chr11:12599394:G:A	rs12283793	G	A	G	Hoxd9_MA0913.1	10	0	+	0	0	.
chr11	12599412	12599413	chr11:12599413:A:C	rs12270452	A	C	C	Hoxd9_MA0913.1	29	0	+	0	0	.
chr11	12704125	12704126	chr11:12704126:G:A	rs75378973	G	A	A	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr11	12803111	12803112	chr11:12803112:T:G	rs77840438	T	G	T	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr11	12853541	12853542	chr11:12853542:C:T	rs1440277	C	T	C	Hoxd9_MA0913.1	13	0	-	0	0	.
chr11	13095210	13095211	chr11:13095211:G:A	rs1441338	G	A	G	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr11	13126794	13126795	chr11:13126795:C:T	rs61878007	C	T	C	Hoxd9_MA0913.1	29	0	-	0	0	.
chr11	13134936	13134937	chr11:13134937:A:T	rs10831980	A	T	A	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr11	13440508	13440509	chr11:13440509:G:A	rs1562436	G	A	G	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr11	13687604	13687605	chr11:13687605:C:G	rs151303435	C	G	C	Hoxd9_MA0913.1	13	0	-	0	0	.
chr11	13852041	13852042	chr11:13852042:A:C	rs16913252	A	C	A	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr11	14111746	14111747	chr11:14111747:G:A	rs1919302	G	A	G	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr11	14308713	14308714	chr11:14308714:C:T	rs2915407	C	T	T	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr11	15044570	15044571	chr11:15044571:T:C	rs7482964	T	C	T	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr11	15106304	15106305	chr11:15106305:G:A	rs10734230	G	A	G	Hoxd9_MA0913.1	17	0	+	0	0	.
chr11	15213946	15213947	chr11:15213947:C:G	rs7129739	C	G	C	Hoxd9_MA0913.1	9	1	+	7.7976343601680895	7.4131794346509094	GCCATAAAAC
chr11	15273883	15273884	chr11:15273884:G:A	rs7128613	G	A	G	Hoxd9_MA0913.1	29	0	+	0	0	.
chr11	15548499	15548500	chr11:15548500:A:G	rs10766266	A	G	G	Hoxd9_MA0913.1	20	0	-	0	0	.
chr11	15674718	15674719	chr11:15674719:A:G	rs115442402	A	G	A	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr11	15730297	15730298	chr11:15730298:G:A	rs77291569	G	A	G	Hoxd9_MA0913.1	19	0	-	0	0	.
chr11	15873631	15873632	chr11:15873632:G:A	rs4756835	G	A	G	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr11	16606149	16606150	chr11:16606150:G:A	rs182370358	G	A	G	Hoxd9_MA0913.1	29	0	+	0	0	.
chr11	16608745	16608746	chr11:16608746:A:T	rs10741703	A	T	A	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr11	18651492	18651493	chr11:18651493:A:G	rs76456162	A	G	A	Hoxd9_MA0913.1	25	0	+	0	0	.
chr11	18720495	18720496	chr11:18720496:A:G	rs12421865	A	G	A	Hoxd9_MA0913.1	3	1	+	8.719303557138431	6.891684616643326	GCAATAAAAC
chr11	19116848	19116849	chr11:19116849:T:C	rs11025022	T	C	T	Hoxd9_MA0913.1	17	0	+	0	0	.
chr11	19426325	19426326	chr11:19426326:T:C	rs2702639	T	C	C	Hoxd9_MA0913.1	26	0	-	0	0	.
chr11	19500453	19500454	chr11:19500454:T:C	rs1032191	T	C	C	Hoxd9_MA0913.1	27	0	+	0	0	.
chr11	19597617	19597618	chr11:19597618:T:G	rs568522484	T	G	T	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr11	19597627	19597628	chr11:19597628:A:G	rs7929648	A	G	A	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr11	19935729	19935730	chr11:19935730:G:A	rs149629994	G	A	G	Hoxd9_MA0913.1	0	1	-	8.282172881897674	6.723028854328064	CCAATTAAAA
chr11	20008883	20008884	chr11:20008884:T:G	rs11606785	T	G	T	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr11	20011660	20011661	chr11:20011661:A:C	rs117765653	A	C	A	Hoxd9_MA0913.1	11	0	-	0	0	.
chr11	20204104	20204105	chr11:20204105:C:T	rs1829576	C	T	C	Hoxd9_MA0913.1	21	0	+	0	0	.
chr11	20454013	20454014	chr11:20454014:C:T	rs10833328	C	T	C	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr11	21063342	21063343	chr11:21063343:T:C	rs77664186	T	C	T	Hoxd9_MA0913.1	14	0	-	0	0	.
chr11	21138011	21138012	chr11:21138012:T:C	rs1260149	T	C	T	Hoxd9_MA0913.1	5	1	-	7.984561357794846	1.7628982048989783	GCAATAAAGT
chr11	21421475	21421476	chr11:21421476:C:G	rs1945429	C	G	C	Hoxd9_MA0913.1	12	0	+	0	0	.
chr11	21541519	21541520	chr11:21541520:T:C	rs10833562	T	C	T	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr11	21651631	21651632	chr11:21651632:A:G	rs10734304	A	G	G	Hoxd9_MA0913.1	19	0	+	0	0	.
chr11	21723885	21723886	chr11:21723886:C:T	rs1459878	C	T	C	Hoxd9_MA0913.1	23	0	-	0	0	.
chr11	21727464	21727465	chr11:21727465:G:C	rs138866183	G	C	G	Hoxd9_MA0913.1	21	0	-	0	0	.
chr11	21943476	21943477	chr11:21943477:C:T	rs115518391	C	T	C	Hoxd9_MA0913.1	16	0	-	0	0	.
chr11	21979339	21979340	chr11:21979340:C:A	rs324208	C	A	C	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr11	22276919	22276920	chr11:22276920:T:G	rs79853095	T	G	T	Hoxd9_MA0913.1	13	0	-	0	0	.
chr11	22454266	22454267	chr11:22454267:C:T	rs2671122	C	T	T	Hoxd9_MA0913.1	11	0	+	0	0	.
chr11	22556427	22556428	chr11:22556428:A:G	rs12366112	A	G	A	Hoxd9_MA0913.1	13	0	-	0	0	.
chr11	22591842	22591843	chr11:22591843:A:C	rs1355889	A	C	A	Hoxd9_MA0913.1	12	0	-	0	0	.
chr11	22667015	22667016	chr11:22667016:G:T	rs188600297	G	T	G	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr11	22674444	22674445	chr11:22674445:C:T	rs1121196	C	T	T	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr11	22681528	22681529	chr11:22681529:C:T	rs12787124	C	T	C	Hoxd9_MA0913.1	28	0	-	0	0	.
chr11	22683113	22683114	chr11:22683114:A:T	rs111898628	A	T	A	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr11	23217190	23217191	chr11:23217191:G:A	rs79045664	G	A	G	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr11	23625993	23625994	chr11:23625994:A:C	rs1401618	A	C	A	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr11	24391074	24391075	chr11:24391075:T:G	rs4923170	T	G	T	Hoxd9_MA0913.1	10	0	+	0	0	.
chr11	24755785	24755786	chr11:24755786:G:C	rs74358413	G	C	G	Hoxd9_MA0913.1	26	0	+	0	0	.
chr11	24782767	24782768	chr11:24782768:A:T	rs2631394	A	T	A	Hoxd9_MA0913.1	19	0	+	0	0	.
chr11	24926074	24926075	chr11:24926075:C:T	rs117727000	C	T	C	Hoxd9_MA0913.1	10	0	-	0	0	.
chr11	25163463	25163464	chr11:25163464:G:A	rs11028475	G	A	G	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr11	25745944	25745945	chr11:25745945:C:A	rs191259087	C	A	c	Hoxd9_MA0913.1	0	1	-	9.801341972390743	6.764199276437873	GCAATAAAAA
chr11	25830804	25830805	chr11:25830805:T:C	rs72886363	T	C	T	Hoxd9_MA0913.1	4	1	+	8.678133135028622	5.385998883253641	GCAATTAAAC
chr11	26146232	26146233	chr11:26146233:T:C	rs3114687	T	C	T	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr11	26228215	26228216	chr11:26228216:G:A	rs11605852	G	A	A	Hoxd9_MA0913.1	15	0	-	0	0	.
chr11	26228236	26228237	chr11:26228237:C:T	rs1870757	C	T	T	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr11	26546508	26546509	chr11:26546509:C:A	rs3108883	C	A	A	Hoxd9_MA0913.1	11	0	-	0	0	.
chr11	26551263	26551264	chr11:26551264:A:G	rs186305076	A	G	A	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr11	26782767	26782768	chr11:26782768:T:G	rs117113118	T	G	T	Hoxd9_MA0913.1	5	1	+	8.568625789732518	2.388133058946461	ACAATTAAAT
chr11	27118651	27118652	chr11:27118652:G:A	rs972904	G	A	A	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr11	27188362	27188363	chr11:27188363:C:T	rs7952355	C	T	c	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr11	27202068	27202069	chr11:27202069:G:A	rs10835127	G	A	G	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr11	27202072	27202073	chr11:27202073:T:C	rs6484272	T	C	C	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr11	27228185	27228186	chr11:27228186:A:T	rs16916780	A	T	A	Hoxd9_MA0913.1	17	0	+	0	0	.
chr11	27332838	27332839	chr11:27332839:T:G	rs11029953	T	G	T	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr11	27371026	27371027	chr11:27371027:T:C	rs1531557	T	C	C	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr11	27465394	27465395	chr11:27465395:C:T	rs72889565	C	T	C	Hoxd9_MA0913.1	12	0	+	0	0	.
chr11	27695300	27695301	chr11:27695301:T:C	rs72881244	T	C	T	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr11	27864130	27864131	chr11:27864131:T:A	rs2638117	T	A	A	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr11	28166025	28166026	chr11:28166026:G:C	rs11030232	G	C	G	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr11	28417015	28417016	chr11:28417016:C:G	rs4433557	C	G	C	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr11	28711709	28711710	chr11:28711710:T:C	rs11602636	T	C	T	Hoxd9_MA0913.1	9	1	+	8.246554688443613	7.408328310329255	GTCATTAAAT
chr11	28743048	28743049	chr11:28743049:C:G	rs1914474	C	G	C	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr11	29066454	29066455	chr11:29066455:T:G	chr11:29066455:T:G	T	G	T	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr11	30345784	30345785	chr11:30345785:T:C	rs1538109	T	C	c	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr11	30380557	30380558	chr11:30380558:T:C	rs487336	T	C	C	Hoxd9_MA0913.1	23	0	+	0	0	.
chr11	30594700	30594701	chr11:30594701:C:T	rs7101519	C	T	C	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr11	30741388	30741389	chr11:30741389:T:C	rs613950	T	C	C	Hoxd9_MA0913.1	1	1	+	8.287725110553424	8.635860738282448	GTCATAAAAT
chr11	30741416	30741417	chr11:30741417:A:G	rs599448	A	G	G	Hoxd9_MA0913.1	29	0	+	0	0	.
chr11	31305550	31305551	chr11:31305551:T:G	rs2616817	T	G	T	Hoxd9_MA0913.1	7	1	-	9.760171550280933	6.466324798562502	GCAATTAAAA
chr11	31664900	31664901	chr11:31664901:G:A	rs4922571	G	A	G	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr11	31781930	31781931	chr11:31781931:A:G	rs3026407	A	G	A	Hoxd9_MA0913.1	16	0	-	0	0	.
chr11	31810818	31810819	chr11:31810819:C:T	rs56139994	C	T	C	Hoxd9_MA0913.1	29	0	+	0	0	.
chr11	31969343	31969344	chr11:31969344:C:G	rs113550663	C	G	C	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr11	32081727	32081728	chr11:32081728:C:G	rs2474162	C	G	G	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr11	32143609	32143610	chr11:32143610:T:C	rs2235998	T	C	T	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr11	32203064	32203065	chr11:32203065:A:G	rs4922906	A	G	G	Hoxd9_MA0913.1	10	0	+	0	0	.
chr11	32437077	32437078	chr11:32437078:G:A	rs5030118	G	A	G	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr11	32449572	32449573	chr11:32449573:G:A	rs79443652	G	A	G	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr11	32495806	32495807	chr11:32495807:G:A	rs7109478	G	A	G	Hoxd9_MA0913.1	8	1	+	8.187202972822991	9.760171550280933	GCAATTAAGA
chr11	32541463	32541464	chr11:32541464:G:A	rs10835945	G	A	G	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr11	32671754	32671755	chr11:32671755:C:T	rs7129723	C	T	C	Hoxd9_MA0913.1	17	0	+	0	0	.
chr11	32881601	32881602	chr11:32881602:G:A	rs4756328	G	A	A	Hoxd9_MA0913.1	2	1	+	7.8800714937946905	9.55752993525279	GCGATAAAAT
chr11	32891908	32891909	chr11:32891909:A:G	rs78315659	A	G	A	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr11	33019791	33019792	chr11:33019792:C:T	rs7105777	C	T	T	Hoxd9_MA0913.1	29	0	+	0	0	.
chr11	33166606	33166607	chr11:33166607:A:C	rs7945332	A	C	A	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr11	33362683	33362684	chr11:33362684:C:T	rs187424490	C	T	C	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr11	33619598	33619599	chr11:33619599:T:C	rs77162322	T	C	T	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr11	33691288	33691289	chr11:33691289:A:C	rs10501128	A	C	C	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr11	33949365	33949366	chr11:33949366:C:A	rs11032461	C	A	C	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr11	34006533	34006534	chr11:34006534:A:T	rs7110667	A	T	A	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr11	34030702	34030703	chr11:34030703:G:C	rs185533586	G	C	G	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr11	34047214	34047215	chr11:34047215:C:A	rs10768047	C	A	C	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr11	34065959	34065960	chr11:34065960:T:C	chr11:34065960:T:C	T	C	T	Hoxd9_MA0913.1	0	1	-	8.853608248980283	9.801341972390743	ACAATAAAAA
chr11	34075706	34075707	chr11:34075707:G:A	rs10047487	G	A	G	Hoxd9_MA0913.1	15	0	-	0	0	.
chr11	34226266	34226267	chr11:34226267:C:T	rs4756117	C	T	C	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr11	34244470	34244471	chr11:34244471:A:T	rs61880453	A	T	A	Hoxd9_MA0913.1	8	1	+	8.60979621184233	7.131465609813278	ACAATAAAAT
chr11	34308952	34308953	chr11:34308953:G:T	rs12800573	G	T	G	Hoxd9_MA0913.1	25	0	-	0	0	.
chr11	34344237	34344238	chr11:34344238:T:G	rs78072691	T	G	T	Hoxd9_MA0913.1	8	1	-	8.490366725581566	6.490703085929026	GTCATTAAAA
chr11	34417295	34417296	chr11:34417296:G:A	rs12361866	G	A	G	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr11	34593339	34593340	chr11:34593340:T:C	rs2100396	T	C	T	Hoxd9_MA0913.1	13	0	-	0	0	.
chr11	34683169	34683170	chr11:34683170:A:G	rs856902	A	G	A	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr11	34809819	34809820	chr11:34809820:C:G	rs147791972	C	G	C	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr11	35009523	35009524	chr11:35009524:G:A	rs185001832	G	A	G	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr11	35044758	35044759	chr11:35044759:G:T	rs72923423	G	T	G	Hoxd9_MA0913.1	16	0	+	0	0	.
chr11	35046057	35046058	chr11:35046058:A:G	rs75562784	A	G	A	Hoxd9_MA0913.1	3	1	+	8.32301137036169	6.4953924298665875	GCAATAAATA
chr11	35062085	35062086	chr11:35062086:C:G	rs2553773	C	G	G	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr11	35132039	35132040	chr11:35132040:C:T	rs73451401	C	T	C	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr11	35132051	35132052	chr11:35132052:A:G	rs598725	A	G	A	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr11	35179020	35179021	chr11:35179021:T:C	rs3794106	T	C	T	Hoxd9_MA0913.1	16	0	-	0	0	.
chr11	35182799	35182800	chr11:35182800:G:A	rs77673209	G	A	G	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr11	35225317	35225318	chr11:35225318:A:G	rs2421825	A	G	G	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr11	35242833	35242834	chr11:35242834:C:A	rs11033042	C	A	G	Hoxd9_MA0913.1	9	1	+	8.719303557138431	9.801341972390743	GCAATAAAAC
chr11	35249871	35249872	chr11:35249872:G:A	rs10836356	G	A	A	Hoxd9_MA0913.1	13	0	+	0	0	.
chr11	35545411	35545412	chr11:35545412:A:G	rs11033168	A	G	G	Hoxd9_MA0913.1	8	1	+	8.719303557138431	7.146334979680488	GCAATAAAAC
chr11	35616122	35616123	chr11:35616123:C:T	rs12418696	C	T	C	Hoxd9_MA0913.1	2	1	+	7.7976343601680895	2.2689595252876487	GCCATAAAAC
chr11	35927642	35927643	chr11:35927643:C:T	rs2957956	C	T	c	Hoxd9_MA0913.1	1	1	+	8.853608248980283	8.505472621251258	ACAATAAAAA
chr11	36163022	36163023	chr11:36163023:T:C	chr11:36163023:T:C	T	C	T	Hoxd9_MA0913.1	21	0	+	0	0	.
chr11	36307179	36307180	chr11:36307180:G:A	rs720758	G	A	A	Hoxd9_MA0913.1	13	0	+	0	0	.
chr11	36426507	36426508	chr11:36426508:T:G	rs2422251	T	G	c	Hoxd9_MA0913.1	29	0	-	0	0	.
chr11	36588300	36588301	chr11:36588301:A:G	rs12286114	A	G	A	Hoxd9_MA0913.1	2	1	+	8.32301137036169	6.645552928903593	GCAATAAATA
chr11	36620033	36620034	chr11:36620034:C:T	rs142332217	C	T	C	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr11	36635691	36635692	chr11:36635692:G:T	rs728875	G	T	T	Hoxd9_MA0913.1	9	1	+	8.334848631621252	9.55752993525279	GCAATAAAAG
chr11	36874730	36874731	chr11:36874731:A:G	rs4517489	A	G	A	Hoxd9_MA0913.1	5	1	+	9.801341972390743	3.5796788194948737	GCAATAAAAA
chr11	37500500	37500501	chr11:37500501:T:C	rs1003254727	T	C	T	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr11	37609423	37609424	chr11:37609424:C:T	rs10836811	C	T	T	Hoxd9_MA0913.1	24	0	-	0	0	.
chr11	38090139	38090140	chr11:38090140:C:G	rs74547358	C	G	C	Hoxd9_MA0913.1	8	1	-	8.2283733949328	7.801678332738202	GCAATAAAGA
chr11	38163755	38163756	chr11:38163756:A:G	rs74960678	A	G	A	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr11	38290885	38290886	chr11:38290886:T:C	rs1030836917	T	C	T	Hoxd9_MA0913.1	7	1	-	8.282172881897674	1.443028404543332	CCAATTAAAA
chr11	39014103	39014104	chr11:39014104:G:A	rs16926339	G	A	G	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr11	39014139	39014140	chr11:39014140:A:G	rs1160596	A	G	A	Hoxd9_MA0913.1	20	0	+	0	0	.
chr11	39960741	39960742	chr11:39960742:C:T	rs10837313	C	T	T	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr11	40290384	40290385	chr11:40290385:A:G	rs77383812	A	G	a	Hoxd9_MA0913.1	20	0	-	0	0	.
chr11	40787618	40787619	chr11:40787619:G:C	rs56414142	G	C	G	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr11	40959783	40959784	chr11:40959784:T:C	rs355231	T	C	C	Hoxd9_MA0913.1	26	0	-	0	0	.
chr11	41175734	41175735	chr11:41175735:T:C	rs183009584	T	C	T	Hoxd9_MA0913.1	16	0	+	0	0	.
chr11	41328258	41328259	chr11:41328259:A:T	rs17519982	A	T	A	Hoxd9_MA0913.1	12	0	+	0	0	.
chr11	41378150	41378151	chr11:41378151:A:T	rs2958835	A	T	A	Hoxd9_MA0913.1	5	1	+	9.801341972390743	9.760171550280933	GCAATAAAAA
chr11	41398473	41398474	chr11:41398474:T:C	rs16935673	T	C	T	Hoxd9_MA0913.1	20	0	-	0	0	.
chr11	41826476	41826477	chr11:41826477:G:A	chr11:41826477:G:A	G	A	G	Hoxd9_MA0913.1	13	0	-	0	0	.
chr11	42074955	42074956	chr11:42074956:A:C	rs1387039	A	C	A	Hoxd9_MA0913.1	7	1	+	9.412035922551908	6.118189170833476	GTAATTAAAA
chr11	42337333	42337334	chr11:42337334:A:G	rs11036850	A	G	A	Hoxd9_MA0913.1	3	1	+	8.246554688443613	6.41893574794851	GTCATTAAAT
chr11	42528871	42528872	chr11:42528872:T:C	rs4755160	T	C	T	Hoxd9_MA0913.1	20	0	+	0	0	.
chr11	42972897	42972898	chr11:42972898:C:T	rs17580259	C	T	C	Hoxd9_MA0913.1	14	0	-	0	0	.
chr11	43581749	43581750	chr11:43581750:T:C	rs11820132	T	C	T	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr11	43951058	43951059	chr11:43951059:A:G	rs7126420	A	G	A	Hoxd9_MA0913.1	4	1	-	8.531537147691377	5.239402895916397	GTCATAAAAA
chr11	44141022	44141023	chr11:44141023:C:T	rs10838240	C	T	C	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr11	44236226	44236227	chr11:44236227:G:C	rs112586310	G	C	G	Hoxd9_MA0913.1	21	0	-	0	0	.
chr11	44236251	44236252	chr11:44236252:T:C	rs3740878	T	C	T	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr11	44779355	44779356	chr11:44779356:G:A	rs1869275	G	A	G	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr11	44779379	44779380	chr11:44779380:T:C	rs910460001	T	C	T	Hoxd9_MA0913.1	23	0	+	0	0	.
chr11	44824763	44824764	chr11:44824764:T:C	rs835825	T	C	T	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr11	44887897	44887898	chr11:44887898:T:G	rs75381474	T	G	T	Hoxd9_MA0913.1	17	0	+	0	0	.
chr11	44940588	44940589	chr11:44940589:G:A	rs114393736	G	A	A	Hoxd9_MA0913.1	14	0	-	0	0	.
chr11	45055316	45055317	chr11:45055317:A:C	rs11822283	A	C	C	Hoxd9_MA0913.1	23	0	-	0	0	.
chr11	45518352	45518353	chr11:45518353:T:C	rs60705077	T	C	T	Hoxd9_MA0913.1	17	0	-	0	0	.
chr11	46026688	46026689	chr11:46026689:T:C	rs117847116	T	C	T	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr11	46191859	46191860	chr11:46191860:G:A	rs12808446	G	A	G	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr11	46554350	46554351	chr11:46554351:A:G	chr11:46554351:A:G	A	G	A	Hoxd9_MA0913.1	28	0	+	0	0	.
chr11	47110329	47110330	chr11:47110330:A:G	rs11039097	A	G	A	Hoxd9_MA0913.1	3	1	+	8.187202972822991	6.359584032327886	GCAATTAAGA
chr11	47660849	47660850	chr11:47660850:C:T	rs7933184	C	T	C	Hoxd9_MA0913.1	27	0	-	0	0	.
chr11	47827879	47827880	chr11:47827880:C:G	rs4752871	C	G	c	Hoxd9_MA0913.1	13	0	+	0	0	.
chr11	47863109	47863110	chr11:47863110:A:T	rs112056982	A	T	A	Hoxd9_MA0913.1	12	0	+	0	0	.
chr11	48109534	48109535	chr11:48109535:G:A	chr11:48109535:G:A	G	A	G	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr11	48308006	48308007	chr11:48308007:G:A	rs7934490	G	A	G	Hoxd9_MA0913.1	16	0	+	0	0	.
chr11	49714978	49714979	chr11:49714979:G:T	rs891388135	G	T	g	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr11	49853104	49853105	chr11:49853105:C:T	rs7947286	C	T	.	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr11	50139420	50139421	chr11:50139421:G:T	rs1995044	G	T	.	Hoxd9_MA0913.1	12	0	+	0	0	.
chr11	50139421	50139422	chr11:50139422:C:T	rs1995045	C	T	.	Hoxd9_MA0913.1	13	0	+	0	0	.
chr11	54716987	54716988	chr11:54716988:C:T	rs34930744	C	T	C	Hoxd9_MA0913.1	0	1	-	7.801678332738202	6.853944609327742	GCAATAAACA
chr11	55610420	55610421	chr11:55610421:A:G	rs1246070482	A	G	A	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr11	56089831	56089832	chr11:56089832:C:G	rs17530416	C	G	C	Hoxd9_MA0913.1	10	0	+	0	0	.
chr11	56441727	56441728	chr11:56441728:C:A	rs661090	C	A	A	Hoxd9_MA0913.1	14	0	-	0	0	.
chr11	56473402	56473403	chr11:56473403:G:A	rs624412	G	A	G	Hoxd9_MA0913.1	28	0	+	0	0	.
chr11	57279822	57279823	chr11:57279823:T:G	rs12788046	T	G	T	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr11	57766717	57766718	chr11:57766718:A:G	rs12146692	A	G	A	Hoxd9_MA0913.1	19	0	-	0	0	.
chr11	57793633	57793634	chr11:57793634:G:T	rs501054	G	T	G	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr11	58642387	58642388	chr11:58642388:T:C	rs7948312	T	C	T	Hoxd9_MA0913.1	15	0	+	0	0	.
chr11	58844520	58844521	chr11:58844521:C:T	rs1943282	C	T	.	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr11	59247636	59247637	chr11:59247637:A:T	rs116888500	A	T	A	Hoxd9_MA0913.1	23	0	-	0	0	.
chr11	59465682	59465683	chr11:59465683:A:G	rs137993351	A	G	A	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr11	59616278	59616279	chr11:59616279:G:A	rs114054338	G	A	G	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr11	59767352	59767353	chr11:59767353:T:C	rs1026009263	T	C	T	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr11	59960900	59960901	chr11:59960901:A:G	rs11828946	A	G	G	Hoxd9_MA0913.1	5	1	+	8.079199333223738	1.857536180327869	GCAATAAATT
chr11	60070103	60070104	chr11:60070104:T:A	rs10897003	T	A	.	Hoxd9_MA0913.1	12	0	-	0	0	.
chr11	60156034	60156035	chr11:60156035:A:G	rs983392	A	G	.	Hoxd9_MA0913.1	14	0	-	0	0	.
chr11	60343272	60343273	chr11:60343273:C:T	rs2017738	C	T	A	Hoxd9_MA0913.1	0	1	-	8.838502353310592	7.890768629900132	GCCATTAAAA
chr11	60343275	60343276	chr11:60343276:G:T	chr11:60343276:G:T	G	T	G	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr11	60446188	60446189	chr11:60446189:A:T	rs77351852	A	T	A	Hoxd9_MA0913.1	6	1	+	8.838502353310592	6.415182405776607	GCCATTAAAA
chr11	60481052	60481053	chr11:60481053:T:C	rs1336194208	T	C	T	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr11	60831923	60831924	chr11:60831924:G:A	rs475601	G	A	G	Hoxd9_MA0913.1	13	0	-	0	0	.
chr11	60831947	60831948	chr11:60831948:G:C	rs956708	G	C	G	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr11	60894010	60894011	chr11:60894011:T:C	rs73491099	T	C	T	Hoxd9_MA0913.1	10	0	-	0	0	.
chr11	60913730	60913731	chr11:60913731:T:C	rs1280399412	T	C	T	Hoxd9_MA0913.1	26	0	-	0	0	.
chr11	60985642	60985643	chr11:60985643:A:C	rs6591633	A	C	A	Hoxd9_MA0913.1	29	0	+	0	0	.
chr11	61833905	61833906	chr11:61833906:C:T	rs2524296	C	T	C	Hoxd9_MA0913.1	23	0	-	0	0	.
chr11	61870947	61870948	chr11:61870948:G:A	rs472031	G	A	G	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr11	62036628	62036629	chr11:62036629:C:T	rs9787973	C	T	T	Hoxd9_MA0913.1	13	0	-	0	0	.
chr11	62171272	62171273	chr11:62171273:C:T	rs112201321	C	T	C	Hoxd9_MA0913.1	24	0	-	0	0	.
chr11	62176949	62176950	chr11:62176950:T:C	rs12364840	T	C	C	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr11	62344370	62344371	chr11:62344371:T:G	rs147094663	T	G	T	Hoxd9_MA0913.1	17	0	-	0	0	.
chr11	62360760	62360761	chr11:62360761:C:A	rs112036030	C	A	a	Hoxd9_MA0913.1	15	0	-	0	0	.
chr11	62380204	62380205	chr11:62380205:G:A	rs148619450	G	A	G	Hoxd9_MA0913.1	23	0	-	0	0	.
chr11	62480826	62480827	chr11:62480827:A:G	rs7925228	A	G	A	Hoxd9_MA0913.1	29	0	+	0	0	.
chr11	62706693	62706694	chr11:62706694:C:A	rs183659840	C	A	C	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr11	62804960	62804961	chr11:62804961:C:A	rs3763851	C	A	C	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr11	62841493	62841494	chr11:62841494:G:C	rs140357307	G	C	G	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr11	62841495	62841496	chr11:62841496:G:C	rs17157578	G	C	C	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr11	62841499	62841500	chr11:62841500:T:C	rs75010105	T	C	T	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr11	62841511	62841512	chr11:62841512:G:C	rs17157579	G	C	G	Hoxd9_MA0913.1	0	1	+	8.123883530932645	6.645884862549387	GCGATAAAAA
chr11	62841512	62841513	chr11:62841513:C:T	rs115367209	C	T	C	Hoxd9_MA0913.1	1	1	+	8.123883530932645	7.775747903203619	GCGATAAAAA
chr11	62841513	62841514	chr11:62841514:G:A	rs145437172	G	A	G	Hoxd9_MA0913.1	2	1	+	8.123883530932645	9.801341972390743	GCGATAAAAA
chr11	62841515	62841516	chr11:62841516:T:C	rs138365151	T	C	C	Hoxd9_MA0913.1	4	1	+	8.123883530932645	4.831749279157664	GCGATAAAAA
chr11	62841517	62841518	chr11:62841518:A:G	rs76066936	A	G	a	Hoxd9_MA0913.1	6	1	+	8.123883530932645	1.308462863153304	GCGATAAAAA
chr11	62841519	62841520	chr11:62841520:A:G	rs113169286	A	G	A	Hoxd9_MA0913.1	8	1	+	8.123883530932645	6.550914953474702	GCGATAAAAA
chr11	62841528	62841529	chr11:62841529:T:C	rs75130682	T	C	T	Hoxd9_MA0913.1	17	0	+	0	0	.
chr11	62841530	62841531	chr11:62841531:C:T	rs578209563	C	T	c	Hoxd9_MA0913.1	19	0	+	0	0	.
chr11	62841535	62841536	chr11:62841536:C:T	rs769913319	C	T	C	Hoxd9_MA0913.1	24	0	+	0	0	.
chr11	62841540	62841541	chr11:62841541:A:G	rs948296804	A	G	-	Hoxd9_MA0913.1	29	0	+	0	0	.
chr11	63681085	63681086	chr11:63681086:G:A	rs113755620	G	A	G	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr11	63804391	63804392	chr11:63804392:G:A	rs61886076	G	A	G	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr11	64234271	64234272	chr11:64234272:G:A	rs188205396	G	A	G	Hoxd9_MA0913.1	10	0	+	0	0	.
chr11	64738076	64738077	chr11:64738077:C:T	rs537490226	C	T	C	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr11	64752901	64752902	chr11:64752902:T:A	rs565688	T	A	A	Hoxd9_MA0913.1	4	1	+	8.187202972822991	5.499951548636833	GCAATTAAGA
chr11	65150654	65150655	chr11:65150655:T:C	rs72932867	T	C	T	Hoxd9_MA0913.1	6	1	-	9.209394307523764	2.3939736397444245	GTAATAAAAT
chr11	65202187	65202188	chr11:65202188:T:C	rs600135	T	C	C	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr11	65473492	65473493	chr11:65473493:T:C	rs35826299	T	C	C	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr11	65770084	65770085	chr11:65770085:A:G	rs1193496	A	G	A	Hoxd9_MA0913.1	3	1	+	8.678133135028622	6.850514194533517	GCAATTAAAC
chr11	66137114	66137115	chr11:66137115:G:A	rs79885282	G	A	G	Hoxd9_MA0913.1	13	0	+	0	0	.
chr11	66172356	66172357	chr11:66172357:C:T	rs931010483	C	T	C	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr11	66172394	66172395	chr11:66172395:T:C	rs145862334	T	C	T	Hoxd9_MA0913.1	20	0	+	0	0	.
chr11	66372925	66372926	chr11:66372926:G:A	rs7107191	G	A	G	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr11	66641430	66641431	chr11:66641431:T:G	rs75336634	T	G	T	Hoxd9_MA0913.1	27	0	-	0	0	.
chr11	66918254	66918255	chr11:66918255:T:C	rs7952017	T	C	C	Hoxd9_MA0913.1	23	0	+	0	0	.
chr11	67212739	67212740	chr11:67212740:G:A	rs115440009	G	A	G	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr11	67711293	67711294	chr11:67711294:A:G	rs185721792	A	G	-	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr11	67732706	67732707	chr11:67732707:A:T	rs7948392	A	T	-	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr11	67884785	67884786	chr11:67884786:T:C	rs184325773	T	C	-	Hoxd9_MA0913.1	21	0	-	0	0	.
chr11	68102853	68102854	chr11:68102854:G:A	rs11228131	G	A	A	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr11	68256616	68256617	chr11:68256617:G:T	rs2450910	G	T	T	Hoxd9_MA0913.1	1	1	-	7.973723031895638	5.553904655870381	GCAGTAAAAA
chr11	68736957	68736958	chr11:68736958:G:A	rs72943208	G	A	G	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr11	68741565	68741566	chr11:68741566:A:G	chr11:68741566:A:G	A	G	A	Hoxd9_MA0913.1	29	0	+	0	0	.
chr11	68840251	68840252	chr11:68840252:G:A	rs115202837	G	A	G	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr11	69044555	69044556	chr11:69044556:C:T	rs749363	C	T	T	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr11	69246477	69246478	chr11:69246478:A:G	rs61881140	A	G	A	Hoxd9_MA0913.1	25	0	-	0	0	.
chr11	69416929	69416930	chr11:69416930:T:G	rs56836223	T	G	T	Hoxd9_MA0913.1	22	0	-	0	0	.
chr11	69416966	69416967	chr11:69416967:G:A	rs577591425	G	A	G	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr11	69417107	69417108	chr11:69417108:A:G	rs7943577	A	G	A	Hoxd9_MA0913.1	25	0	-	0	0	.
chr11	69822368	69822369	chr11:69822369:C:T	rs3895665	C	T	C	Hoxd9_MA0913.1	24	0	-	0	0	.
chr11	70063216	70063217	chr11:70063217:C:A	rs981379933	C	A	C	Hoxd9_MA0913.1	19	0	-	0	0	.
chr11	70303365	70303366	chr11:70303366:G:A	rs72947012	G	A	G	Hoxd9_MA0913.1	28	0	-	0	0	.
chr11	70316483	70316484	chr11:70316484:A:G	rs56368270	A	G	A	Hoxd9_MA0913.1	24	0	+	0	0	.
chr11	70340662	70340663	chr11:70340663:A:C	rs3900798	A	C	A	Hoxd9_MA0913.1	14	0	+	0	0	.
chr11	70906736	70906737	chr11:70906737:G:A	rs924744	G	A	G	Hoxd9_MA0913.1	23	0	-	0	0	.
chr11	71131729	71131730	chr11:71131730:A:G	rs11232176	A	G	A	Hoxd9_MA0913.1	7	1	+	8.079199333223738	1.240054855869395	GCAATAAATT
chr11	71141602	71141603	chr11:71141603:T:C	rs58713366	T	C	C	Hoxd9_MA0913.1	21	0	-	0	0	.
chr11	71142011	71142012	chr11:71142012:G:A	rs66668954	G	A	A	Hoxd9_MA0913.1	24	0	+	0	0	.
chr11	71153299	71153300	chr11:71153300:G:A	rs191621131	G	A	-	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr11	71214234	71214235	chr11:71214235:T:C	rs749035	T	C	T	Hoxd9_MA0913.1	17	0	+	0	0	.
chr11	71232255	71232256	chr11:71232256:A:T	rs3020025	A	T	A	Hoxd9_MA0913.1	6	1	+	7.4131794346509094	4.989859487116925	GCCATAAAAG
chr11	71447417	71447418	chr11:71447418:A:T	rs1412833015	A	T	A	Hoxd9_MA0913.1	9	1	+	7.801678332738202	7.557866295600249	GCAATAAACA
chr11	71568306	71568307	chr11:71568307:C:T	rs118079461	C	T	C	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr11	71710720	71710721	chr11:71710721:G:A	rs11234603	G	A	g	Hoxd9_MA0913.1	18	0	+	0	0	.
chr11	71789290	71789291	chr11:71789291:G:A	rs9736266	G	A	g	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr11	71931211	71931212	chr11:71931212:C:T	rs4944232	C	T	C	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr11	72140462	72140463	chr11:72140463:T:C	rs118013879	T	C	T	Hoxd9_MA0913.1	14	0	+	0	0	.
chr11	72140974	72140975	chr11:72140975:G:C	rs114683364	G	C	G	Hoxd9_MA0913.1	21	0	+	0	0	.
chr11	72183800	72183801	chr11:72183801:T:C	chr11:72183801:T:C	T	C	T	Hoxd9_MA0913.1	16	0	+	0	0	.
chr11	72856867	72856868	chr11:72856868:T:C	rs1192133431	T	C	T	Hoxd9_MA0913.1	22	0	+	0	0	.
chr11	73074493	73074494	chr11:73074494:A:C	rs117181194	A	C	A	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr11	73153306	73153307	chr11:73153307:C:T	rs11823385	C	T	C	Hoxd9_MA0913.1	23	0	-	0	0	.
chr11	73245641	73245642	chr11:73245642:C:T	rs143711642	C	T	C	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr11	73330293	73330294	chr11:73330294:T:C	rs79778136	T	C	T	Hoxd9_MA0913.1	8	1	-	9.55752993525279	7.984561357794846	GCAATAAAAT
chr11	73404900	73404901	chr11:73404901:T:C	rs73542960	T	C	T	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr11	73430581	73430582	chr11:73430582:C:G	rs11823913	C	G	g	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr11	73636749	73636750	chr11:73636750:G:A	rs7103745	G	A	G	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr11	73648190	73648191	chr11:73648191:C:T	rs1784499	C	T	C	Hoxd9_MA0913.1	12	0	-	0	0	.
chr11	74370455	74370456	chr11:74370456:G:A	rs10793079	G	A	G	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr11	74399282	74399283	chr11:74399283:A:G	rs10437738	A	G	A	Hoxd9_MA0913.1	18	0	+	0	0	.
chr11	74399289	74399290	chr11:74399290:G:A	rs60917039	G	A	G	Hoxd9_MA0913.1	25	0	+	0	0	.
chr11	74647636	74647637	chr11:74647637:A:G	rs10899024	A	G	A	Hoxd9_MA0913.1	29	0	+	0	0	.
chr11	74675686	74675687	chr11:74675687:G:A	rs7104675	G	A	A	Hoxd9_MA0913.1	27	0	-	0	0	.
chr11	74708117	74708118	chr11:74708118:T:G	rs1944936	T	G	T	Hoxd9_MA0913.1	14	0	+	0	0	.
chr11	74750116	74750117	chr11:74750117:G:A	rs12290339	G	A	G	Hoxd9_MA0913.1	0	1	+	9.760171550280933	8.812437826870472	GCAATTAAAA
chr11	74950064	74950065	chr11:74950065:T:A	rs562265	T	A	a	Hoxd9_MA0913.1	13	0	-	0	0	.
chr11	75077567	75077568	chr11:75077568:C:T	rs116634857	C	T	C	Hoxd9_MA0913.1	2	1	-	7.83890107168488	9.51635951314298	GCGATTAAAT
chr11	75077576	75077577	chr11:75077577:G:A	rs116309270	G	A	G	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr11	75247902	75247903	chr11:75247903:G:T	rs1783472	G	T	T	Hoxd9_MA0913.1	12	0	+	0	0	.
chr11	75534012	75534013	chr11:75534013:T:C	rs12283626	T	C	C	Hoxd9_MA0913.1	22	0	+	0	0	.
chr11	76135654	76135655	chr11:76135655:A:C	rs17134594	A	C	C	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr11	76158373	76158374	chr11:76158374:C:T	rs12786836	C	T	C	Hoxd9_MA0913.1	14	0	+	0	0	.
chr11	76260833	76260834	chr11:76260834:G:C	rs595144	G	C	G	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr11	76291163	76291164	chr11:76291164:T:C	rs72994416	T	C	T	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr11	76551668	76551669	chr11:76551669:C:T	rs191933476	C	T	C	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr11	76678206	76678207	chr11:76678207:G:A	rs11236851	G	A	G	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr11	77053607	77053608	chr11:77053608:G:A	rs78494560	G	A	G	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr11	77361483	77361484	chr11:77361484:C:T	rs139731973	C	T	C	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr11	77361484	77361485	chr11:77361485:G:A	rs2602474	G	A	G	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr11	77587360	77587361	chr11:77587361:C:G	rs12420021	C	G	g	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr11	77598520	77598521	chr11:77598521:A:G	rs112144854	A	G	A	Hoxd9_MA0913.1	18	0	-	0	0	.
chr11	77747861	77747862	chr11:77747862:G:T	rs58393579	G	T	G	Hoxd9_MA0913.1	0	1	+	8.719303557138431	5.682160861185562	GCAATAAAAC
chr11	78063552	78063553	chr11:78063553:T:C	rs2282639	T	C	T	Hoxd9_MA0913.1	18	0	-	0	0	.
chr11	78214526	78214527	chr11:78214527:T:C	rs1055248	T	C	t	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr11	78580149	78580150	chr11:78580150:G:T	rs11237558	G	T	T	Hoxd9_MA0913.1	22	0	-	0	0	.
chr11	78667779	78667780	chr11:78667780:A:G	rs11237582	A	G	G	Hoxd9_MA0913.1	20	0	+	0	0	.
chr11	78860873	78860874	chr11:78860874:G:A	chr11:78860874:G:A	G	A	G	Hoxd9_MA0913.1	24	0	+	0	0	.
chr11	78934250	78934251	chr11:78934251:T:C	rs535161	T	C	T	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr11	79089203	79089204	chr11:79089204:G:A	rs60692020	G	A	G	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr11	79312628	79312629	chr11:79312629:T:C	rs55662136	T	C	T	Hoxd9_MA0913.1	4	1	+	8.32301137036169	5.030877118586712	GCAATAAATA
chr11	79391029	79391030	chr11:79391030:C:T	rs580331	C	T	T	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr11	79470558	79470559	chr11:79470559:A:G	rs6592843	A	G	G	Hoxd9_MA0913.1	20	0	+	0	0	.
chr11	79784156	79784157	chr11:79784157:T:C	rs17835798	T	C	T	Hoxd9_MA0913.1	17	0	-	0	0	.
chr11	80122242	80122243	chr11:80122243:A:G	rs1528632	A	G	A	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr11	80298042	80298043	chr11:80298043:C:T	rs11232051	C	T	C	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr11	80298052	80298053	chr11:80298053:T:G	rs7396396	T	G	T	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr11	80582905	80582906	chr11:80582906:G:A	rs1968681	G	A	A	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr11	81261945	81261946	chr11:81261946:A:C	rs945226885	A	C	A	Hoxd9_MA0913.1	6	1	+	8.635860738282448	4.1612838756142425	GCCATAAAAT
chr11	81394559	81394560	chr11:81394560:T:C	rs1458091	T	C	C	Hoxd9_MA0913.1	0	1	-	8.853608248980283	9.801341972390743	ACAATAAAAA
chr11	81792766	81792767	chr11:81792767:C:T	rs7943914	C	T	T	Hoxd9_MA0913.1	3	1	-	7.973723031895638	9.801341972390743	GCAGTAAAAA
chr11	81963193	81963194	chr11:81963194:C:T	rs146858764	C	T	C	Hoxd9_MA0913.1	21	0	-	0	0	.
chr11	82004828	82004829	chr11:82004829:C:A	rs78968564	C	A	C	Hoxd9_MA0913.1	11	0	-	0	0	.
chr11	82004842	82004843	chr11:82004843:G:A	rs77494229	G	A	g	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr11	82824418	82824419	chr11:82824419:G:A	rs7272	G	A	A	Hoxd9_MA0913.1	12	0	+	0	0	.
chr11	82824422	82824423	chr11:82824423:C:G	rs115163750	C	G	C	Hoxd9_MA0913.1	16	0	+	0	0	.
chr11	83629781	83629782	chr11:83629782:C:T	rs9734327	C	T	T	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr11	83820602	83820603	chr11:83820603:A:G	rs1516622	A	G	G	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr11	83909535	83909536	chr11:83909536:G:A	rs34747433	G	A	A	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr11	83925858	83925859	chr11:83925859:C:T	rs1483397	C	T	T	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr11	84465267	84465268	chr11:84465268:A:G	rs117764001	A	G	A	Hoxd9_MA0913.1	3	1	+	9.760171550280933	7.932552609785828	GCAATTAAAA
chr11	84786809	84786810	chr11:84786810:G:A	rs17741065	G	A	G	Hoxd9_MA0913.1	12	0	+	0	0	.
chr11	84825518	84825519	chr11:84825519:G:A	rs145543978	G	A	G	Hoxd9_MA0913.1	25	0	+	0	0	.
chr11	84826248	84826249	chr11:84826249:A:T	rs7946198	A	T	T	Hoxd9_MA0913.1	14	0	+	0	0	.
chr11	84871367	84871368	chr11:84871368:G:A	rs61897910	G	A	G	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr11	84905193	84905194	chr11:84905194:A:G	rs7931437	A	G	G	Hoxd9_MA0913.1	20	0	-	0	0	.
chr11	85673490	85673491	chr11:85673491:A:C	rs750452291	A	C	A	Hoxd9_MA0913.1	12	0	-	0	0	.
chr11	85675752	85675753	chr11:85675753:T:A	rs290182	T	A	T	Hoxd9_MA0913.1	16	0	+	0	0	.
chr11	85683417	85683418	chr11:85683418:C:T	rs370385	C	T	C	Hoxd9_MA0913.1	22	0	+	0	0	.
chr11	86481170	86481171	chr11:86481171:A:G	rs116697544	A	G	A	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr11	86583061	86583062	chr11:86583062:C:T	rs10898504	C	T	C	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr11	86621314	86621315	chr11:86621315:C:T	rs999472	C	T	C	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr11	86681789	86681790	chr11:86681790:G:A	rs536703331	G	A	g	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr11	86718150	86718151	chr11:86718151:G:A	rs118186808	G	A	G	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr11	86916333	86916334	chr11:86916334:T:C	rs115458743	T	C	T	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr11	86916335	86916336	chr11:86916336:A:G	rs2212761	A	G	G	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr11	86917046	86917047	chr11:86917047:C:T	rs11234873	C	T	C	Hoxd9_MA0913.1	25	0	+	0	0	.
chr11	87083497	87083498	chr11:87083498:G:A	rs17758984	G	A	G	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr11	87124331	87124332	chr11:87124332:A:G	rs2512344	A	G	A	Hoxd9_MA0913.1	8	1	+	7.3720090125411	5.799040435083157	GCCATTAAAG
chr11	87141526	87141527	chr11:87141527:T:G	rs499388	T	G	G	Hoxd9_MA0913.1	13	0	-	0	0	.
chr11	87141550	87141551	chr11:87141551:G:A	rs688542	G	A	A	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr11	87173425	87173426	chr11:87173426:C:A	rs117691272	C	A	C	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr11	87251707	87251708	chr11:87251708:A:T	rs487427	A	T	T	Hoxd9_MA0913.1	3	1	+	9.412035922551908	5.797696053422925	GTAATTAAAA
chr11	87272844	87272845	chr11:87272845:G:A	rs12280253	G	A	A	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr11	87298114	87298115	chr11:87298115:C:T	rs61904518	C	T	C	Hoxd9_MA0913.1	14	0	-	0	0	.
chr11	87298132	87298133	chr11:87298133:C:T	rs12272915	C	T	C	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr11	87307576	87307577	chr11:87307577:G:A	rs116379279	G	A	G	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr11	87723028	87723029	chr11:87723029:T:C	rs769750438	T	C	T	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr11	87739473	87739474	chr11:87739474:G:A	rs115930199	G	A	G	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr11	87840867	87840868	chr11:87840868:C:G	rs2514255	C	G	C	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr11	88292567	88292568	chr11:88292568:A:G	rs571234587	A	G	A	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr11	88292590	88292591	chr11:88292591:G:T	rs368983170	G	T	G	Hoxd9_MA0913.1	16	0	+	0	0	.
chr11	88335160	88335161	chr11:88335161:T:A	rs217077	T	A	A	Hoxd9_MA0913.1	7	1	-	8.812437826870472	5.518591075152042	ACAATTAAAA
chr11	88552862	88552863	chr11:88552863:T:G	rs308785	T	G	T	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr11	89336565	89336566	chr11:89336566:G:A	rs7947257	G	A	G	Hoxd9_MA0913.1	12	0	+	0	0	.
chr11	89380892	89380893	chr11:89380893:G:A	rs188824	G	A	G	Hoxd9_MA0913.1	13	0	+	0	0	.
chr11	89380902	89380903	chr11:89380903:A:G	rs115015264	A	G	A	Hoxd9_MA0913.1	23	0	+	0	0	.
chr11	89608145	89608146	chr11:89608146:G:C	rs17218406	G	C	-	Hoxd9_MA0913.1	16	0	+	0	0	.
chr11	90672160	90672161	chr11:90672161:A:G	rs10501731	A	G	G	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr11	90699668	90699669	chr11:90699669:G:T	rs1792609	G	T	G	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr11	90745412	90745413	chr11:90745413:G:A	rs2105797	G	A	A	Hoxd9_MA0913.1	18	0	-	0	0	.
chr11	91081057	91081058	chr11:91081058:A:C	rs10501749	A	C	A	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr11	91136747	91136748	chr11:91136748:G:C	rs34915398	G	C	G	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr11	91186837	91186838	chr11:91186838:C:T	rs2514114	C	T	C	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr11	91232460	91232461	chr11:91232461:A:G	rs4131655	A	G	A	Hoxd9_MA0913.1	29	0	-	0	0	.
chr11	91307814	91307815	chr11:91307815:T:G	rs11019386	T	G	T	Hoxd9_MA0913.1	18	0	-	0	0	.
chr11	91395529	91395530	chr11:91395530:G:A	rs12272958	G	A	G	Hoxd9_MA0913.1	2	1	+	8.082713108822833	9.760171550280933	GCGATTAAAA
chr11	91404131	91404132	chr11:91404132:A:T	rs545114759	A	T	A	Hoxd9_MA0913.1	18	0	+	0	0	.
chr11	91571753	91571754	chr11:91571754:A:G	rs11602247	A	G	A	Hoxd9_MA0913.1	4	1	-	8.60979621184233	5.317661960067349	ACAATAAAAT
chr11	91791376	91791377	chr11:91791377:T:C	rs4589253	T	C	G	Hoxd9_MA0913.1	13	0	+	0	0	.
chr11	91932419	91932420	chr11:91932420:G:T	rs12799886	G	T	G	Hoxd9_MA0913.1	12	0	+	0	0	.
chr11	92237036	92237037	chr11:92237037:C:A	rs1187171	C	A	C	Hoxd9_MA0913.1	15	0	-	0	0	.
chr11	92237065	92237066	chr11:92237066:T:C	rs1187170	T	C	C	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr11	92237183	92237184	chr11:92237184:G:A	rs11019881	G	A	G	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr11	92501366	92501367	chr11:92501367:G:A	rs615011	G	A	G	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr11	92501529	92501530	chr11:92501530:G:A	rs896658567	G	A	G	Hoxd9_MA0913.1	26	0	+	0	0	.
chr11	92560636	92560637	chr11:92560637:A:G	rs477212	A	G	A	Hoxd9_MA0913.1	0	1	+	8.853608248980283	9.801341972390743	ACAATAAAAA
chr11	92583817	92583818	chr11:92583818:G:A	rs7950462	G	A	G	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr11	93000867	93000868	chr11:93000868:C:G	rs568755696	C	G	C	Hoxd9_MA0913.1	1	1	+	8.635860738282448	5.543295725997735	GCCATAAAAT
chr11	93220305	93220306	chr11:93220306:A:C	chr11:93220306:A:C	A	C	A	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr11	93529829	93529830	chr11:93529830:A:C	rs79373157	A	C	A	Hoxd9_MA0913.1	1	1	-	8.490366725581566	5.745937341025879	GTCATTAAAA
chr11	93909186	93909187	chr11:93909187:A:G	rs35919303	A	G	A	Hoxd9_MA0913.1	20	0	+	0	0	.
chr11	93939769	93939770	chr11:93939770:G:A	rs34699227	G	A	G	Hoxd9_MA0913.1	18	0	+	0	0	.
chr11	94033772	94033773	chr11:94033773:T:G	rs1401183	T	G	G	Hoxd9_MA0913.1	19	0	+	0	0	.
chr11	94185183	94185184	chr11:94185184:T:C	rs1046173	T	C	C	Hoxd9_MA0913.1	29	0	-	0	0	.
chr11	94366495	94366496	chr11:94366496:G:A	rs535369543	G	A	g	Hoxd9_MA0913.1	22	0	+	0	0	.
chr11	94405642	94405643	chr11:94405643:A:G	rs540256302	A	G	A	Hoxd9_MA0913.1	13	0	+	0	0	.
chr11	94586514	94586515	chr11:94586515:G:A	rs7119937	G	A	G	Hoxd9_MA0913.1	0	1	+	8.246554688443613	7.298820965033153	GTCATTAAAT
chr11	94652860	94652861	chr11:94652861:T:G	rs7114222	T	G	G	Hoxd9_MA0913.1	4	1	+	8.334848631621252	5.042714379846271	GCAATAAAAG
chr11	94938442	94938443	chr11:94938443:C:T	rs6483375	C	T	C	Hoxd9_MA0913.1	24	0	+	0	0	.
chr11	94960714	94960715	chr11:94960715:A:G	rs10741498	A	G	A	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr11	95068268	95068269	chr11:95068269:T:C	rs534098661	T	C	T	Hoxd9_MA0913.1	14	0	-	0	0	.
chr11	95243848	95243849	chr11:95243849:A:G	rs1073059	A	G	A	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr11	95379748	95379749	chr11:95379749:T:C	rs60523467	T	C	T	Hoxd9_MA0913.1	25	0	+	0	0	.
chr11	95538590	95538591	chr11:95538591:G:A	rs7926825	G	A	A	Hoxd9_MA0913.1	29	0	+	0	0	.
chr11	95693356	95693357	chr11:95693357:G:A	rs7926230	G	A	A	Hoxd9_MA0913.1	12	0	-	0	0	.
chr11	95704997	95704998	chr11:95704998:T:C	rs11824916	T	C	T	Hoxd9_MA0913.1	2	1	-	7.973723031895638	6.29626459043754	GCAGTAAAAA
chr11	95765104	95765105	chr11:95765105:T:C	rs11021305	T	C	T	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr11	95814402	95814403	chr11:95814403:C:T	rs3016210	C	T	C	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr11	95933873	95933874	chr11:95933874:G:A	rs11021351	G	A	G	Hoxd9_MA0913.1	24	0	+	0	0	.
chr11	96033381	96033382	chr11:96033382:C:T	rs12574769	C	T	C	Hoxd9_MA0913.1	16	0	+	0	0	.
chr11	96060536	96060537	chr11:96060537:C:T	rs6483476	C	T	T	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr11	96200150	96200151	chr11:96200151:G:A	rs553652	G	A	A	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr11	96223259	96223260	chr11:96223260:T:C	rs7124221	T	C	T	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr11	96223260	96223261	chr11:96223261:G:T	rs7104270	G	T	G	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr11	96257973	96257974	chr11:96257974:A:C	rs10831503	A	C	A	Hoxd9_MA0913.1	20	0	-	0	0	.
chr11	96290049	96290050	chr11:96290050:C:T	rs485842	C	T	C	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr11	96876506	96876507	chr11:96876507:C:T	rs17180923	C	T	C	Hoxd9_MA0913.1	13	0	-	0	0	.
chr11	97344978	97344979	chr11:97344979:C:G	rs7113960	C	G	C	Hoxd9_MA0913.1	12	0	+	0	0	.
chr11	98038269	98038270	chr11:98038270:G:A	rs140687099	G	A	G	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr11	98521879	98521880	chr11:98521880:A:G	rs7942573	A	G	A	Hoxd9_MA0913.1	26	0	-	0	0	.
chr11	98693674	98693675	chr11:98693675:G:A	rs7109002	G	A	G	Hoxd9_MA0913.1	20	0	-	0	0	.
chr11	98740282	98740283	chr11:98740283:T:C	rs73539062	T	C	T	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr11	99016221	99016222	chr11:99016222:T:C	rs1291722086	T	C	T	Hoxd9_MA0913.1	25	0	+	0	0	.
chr11	99019728	99019729	chr11:99019729:A:C	rs11218061	A	C	A	Hoxd9_MA0913.1	24	0	-	0	0	.
chr11	99538481	99538482	chr11:99538482:T:C	rs10790788	T	C	C	Hoxd9_MA0913.1	11	0	-	0	0	.
chr11	99630788	99630789	chr11:99630789:A:G	rs658789	A	G	A	Hoxd9_MA0913.1	29	0	-	0	0	.
chr11	99635467	99635468	chr11:99635468:T:C	rs9787865	T	C	T	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr11	99640817	99640818	chr11:99640818:C:G	rs688000	C	G	C	Hoxd9_MA0913.1	29	0	+	0	0	.
chr11	99880497	99880498	chr11:99880498:C:A	rs17134609	C	A	C	Hoxd9_MA0913.1	1	1	+	8.082713108822833	5.662894732797575	GCGATTAAAA
chr11	100448540	100448541	chr11:100448541:C:A	rs4589259	C	A	A	Hoxd9_MA0913.1	2	1	+	7.3720090125411	8.293678209511443	GCCATTAAAG
chr11	100601352	100601353	chr11:100601353:C:G	rs11224312	C	G	C	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr11	100675442	100675443	chr11:100675443:A:G	rs114674228	A	G	A	Hoxd9_MA0913.1	18	0	-	0	0	.
chr11	100700081	100700082	chr11:100700082:A:G	rs7129917	A	G	A	Hoxd9_MA0913.1	3	1	+	7.984561357794846	6.156942417299742	GCAATAAAGT
chr11	100776204	100776205	chr11:100776205:C:T	rs507695	C	T	C	Hoxd9_MA0913.1	1	1	+	8.323343304007485	7.97520767627846	CCAATAAAAA
chr11	101101208	101101209	chr11:101101209:A:C	rs11224589	A	C	A	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr11	101326673	101326674	chr11:101326674:A:G	rs1218925	A	G	G	Hoxd9_MA0913.1	13	0	+	0	0	.
chr11	101430359	101430360	chr11:101430360:A:G	rs75439174	A	G	A	Hoxd9_MA0913.1	22	0	+	0	0	.
chr11	101511293	101511294	chr11:101511294:G:A	rs7127243	G	A	G	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr11	101528778	101528779	chr11:101528779:T:C	rs3924457	T	C	C	Hoxd9_MA0913.1	24	0	+	0	0	.
chr11	101686675	101686676	chr11:101686676:C:T	rs78611570	C	T	C	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr11	101686676	101686677	chr11:101686677:G:A	rs11224955	G	A	G	Hoxd9_MA0913.1	0	1	+	7.7299109947576845	6.782177271347225	GCAGTAAAAT
chr11	101686696	101686697	chr11:101686697:T:C	rs11224956	T	C	T	Hoxd9_MA0913.1	20	0	+	0	0	.
chr11	101715572	101715573	chr11:101715573:A:C	rs78115389	A	C	A	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr11	101734734	101734735	chr11:101734735:C:T	rs11600713	C	T	T	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr11	101818031	101818032	chr11:101818032:A:C	rs4237604	A	C	C	Hoxd9_MA0913.1	3	1	+	8.531537147691377	4.065306477291321	GTCATAAAAA
chr11	101862421	101862422	chr11:101862422:T:C	rs114571572	T	C	T	Hoxd9_MA0913.1	20	0	-	0	0	.
chr11	102118986	102118987	chr11:102118987:G:A	rs11225132	G	A	G	Hoxd9_MA0913.1	18	0	+	0	0	.
chr11	102138632	102138633	chr11:102138633:G:A	rs2019070	G	A	A	Hoxd9_MA0913.1	9	1	-	8.329997507299597	9.168223885413955	GTAATTAAAC
chr11	102269197	102269198	chr11:102269198:C:A	rs77760245	C	A	C	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr11	102294619	102294620	chr11:102294620:G:A	rs17763887	G	A	G	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr11	102474267	102474268	chr11:102474268:A:G	rs567670	A	G	G	Hoxd9_MA0913.1	27	0	-	0	0	.
chr11	102622537	102622538	chr11:102622538:G:A	rs11225344	G	A	G	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr11	102831532	102831533	chr11:102831533:A:G	rs12279515	A	G	A	Hoxd9_MA0913.1	21	0	+	0	0	.
chr11	102964845	102964846	chr11:102964846:G:A	rs10791603	G	A	A	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr11	103110570	103110571	chr11:103110571:T:C	rs2510094	T	C	T	Hoxd9_MA0913.1	14	0	-	0	0	.
chr11	103528134	103528135	chr11:103528135:T:C	rs2034556	T	C	T	Hoxd9_MA0913.1	3	1	-	9.453206344661718	7.625587404166614	GTAATAAAAA
chr11	103592729	103592730	chr11:103592730:C:T	rs34848923	C	T	C	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr11	104557406	104557407	chr11:104557407:T:C	rs58905817	T	C	T	Hoxd9_MA0913.1	10	0	+	0	0	.
chr11	105100104	105100105	chr11:105100105:A:G	rs149348558	A	G	.	Hoxd9_MA0913.1	15	0	-	0	0	.
chr11	105100124	105100125	chr11:105100125:C:T	rs1792770	C	T	.	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr11	105615124	105615125	chr11:105615125:G:A	rs77698121	G	A	G	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr11	105648837	105648838	chr11:105648838:G:A	rs116758895	G	A	G	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr11	105943194	105943195	chr11:105943195:T:C	rs893918562	T	C	T	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr11	106018464	106018465	chr11:106018465:G:A	rs7952626	G	A	A	Hoxd9_MA0913.1	29	0	+	0	0	.
chr11	106319762	106319763	chr11:106319763:C:T	rs118111466	C	T	c	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr11	106319774	106319775	chr11:106319775:A:G	rs2409624	A	G	a	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr11	106353141	106353142	chr11:106353142:A:G	rs7952658	A	G	A	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr11	106387139	106387140	chr11:106387140:C:T	rs73549524	C	T	C	Hoxd9_MA0913.1	29	0	-	0	0	.
chr11	106398538	106398539	chr11:106398539:T:C	rs1512434	T	C	T	Hoxd9_MA0913.1	25	0	+	0	0	.
chr11	106447787	106447788	chr11:106447788:A:G	rs907647	A	G	A	Hoxd9_MA0913.1	3	1	+	9.801341972390743	7.973723031895638	GCAATAAAAA
chr11	106466394	106466395	chr11:106466395:G:T	rs11227059	G	T	T	Hoxd9_MA0913.1	17	0	-	0	0	.
chr11	106503823	106503824	chr11:106503824:A:G	rs7482593	A	G	A	Hoxd9_MA0913.1	10	0	+	0	0	.
chr11	106948830	106948831	chr11:106948831:A:G	rs721625	A	G	A	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr11	107496009	107496010	chr11:107496010:A:G	rs117482997	A	G	A	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr11	107567724	107567725	chr11:107567725:T:C	rs669715	T	C	C	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr11	107839123	107839124	chr11:107839124:C:T	rs529987	C	T	T	Hoxd9_MA0913.1	25	0	+	0	0	.
chr11	107970371	107970372	chr11:107970372:T:C	rs78054498	T	C	T	Hoxd9_MA0913.1	5	1	+	9.412035922551908	6.018404573292349	GTAATTAAAA
chr11	108221575	108221576	chr11:108221576:C:G	rs4987874	C	G	C	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr11	108794003	108794004	chr11:108794004:A:G	rs74734855	A	G	a	Hoxd9_MA0913.1	18	0	-	0	0	.
chr11	109035419	109035420	chr11:109035420:A:G	rs72994754	A	G	A	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr11	109038148	109038149	chr11:109038149:A:G	rs1396914	A	G	G	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr11	109038153	109038154	chr11:109038154:A:G	rs11604258	A	G	A	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr11	109043655	109043656	chr11:109043656:T:A	rs1396915	T	A	A	Hoxd9_MA0913.1	26	0	-	0	0	.
chr11	109043660	109043661	chr11:109043661:C:T	rs75283008	C	T	C	Hoxd9_MA0913.1	21	0	-	0	0	.
chr11	109972451	109972452	chr11:109972452:C:G	rs7946247	C	G	C	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr11	110132018	110132019	chr11:110132019:A:G	rs1564013	A	G	A	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr11	110471821	110471822	chr11:110471822:C:G	rs2298511	C	G	G	Hoxd9_MA0913.1	13	0	+	0	0	.
chr11	111045981	111045982	chr11:111045982:T:C	rs7118898	T	C	C	Hoxd9_MA0913.1	9	1	-	8.32301137036169	6.856518029592199	GCAATAAATA
chr11	111194136	111194137	chr11:111194137:T:G	rs61900577	T	G	T	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr11	111737934	111737935	chr11:111737935:C:T	rs118123882	C	T	T	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr11	112050016	112050017	chr11:112050017:A:G	rs676922	A	G	C	Hoxd9_MA0913.1	25	0	+	0	0	.
chr11	112200570	112200571	chr11:112200571:G:A	rs12420140	G	A	G	Hoxd9_MA0913.1	24	0	-	0	0	.
chr11	112633368	112633369	chr11:112633369:A:T	rs73572536	A	T	A	Hoxd9_MA0913.1	23	0	-	0	0	.
chr11	112972687	112972688	chr11:112972688:G:T	rs13328864	G	T	G	Hoxd9_MA0913.1	29	0	+	0	0	.
chr11	112997742	112997743	chr11:112997743:C:A	rs60249257	C	A	C	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr11	113219457	113219458	chr11:113219458:G:C	rs677642	G	C	G	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr11	113316156	113316157	chr11:113316157:C:T	rs7130072	C	T	C	Hoxd9_MA0913.1	21	0	+	0	0	.
chr11	113549251	113549252	chr11:113549252:A:G	rs10891571	A	G	A	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr11	113578039	113578040	chr11:113578040:C:A	rs7928017	C	A	C	Hoxd9_MA0913.1	28	0	-	0	0	.
chr11	113629790	113629791	chr11:113629791:G:A	rs7131623	G	A	A	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr11	113664186	113664187	chr11:113664187:T:A	rs137866047	T	A	T	Hoxd9_MA0913.1	1	1	+	8.490366725581566	6.418683977285333	GTCATTAAAA
chr11	113670532	113670533	chr11:113670533:A:G	rs2363550	A	G	G	Hoxd9_MA0913.1	26	0	-	0	0	.
chr11	113891448	113891449	chr11:113891449:C:T	rs79988481	C	T	C	Hoxd9_MA0913.1	23	0	-	0	0	.
chr11	113899632	113899633	chr11:113899633:G:A	rs1176758	G	A	A	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr11	114111212	114111213	chr11:114111213:A:C	rs977704980	A	C	A	Hoxd9_MA0913.1	12	0	-	0	0	.
chr11	114144392	114144393	chr11:114144393:A:G	rs672901	A	G	G	Hoxd9_MA0913.1	29	0	-	0	0	.
chr11	114144410	114144411	chr11:114144411:C:T	rs115946726	C	T	C	Hoxd9_MA0913.1	11	0	-	0	0	.
chr11	114149991	114149992	chr11:114149992:C:T	rs11214879	C	T	C	Hoxd9_MA0913.1	1	1	+	7.4131794346509094	7.065043806921886	GCCATAAAAG
chr11	114181181	114181182	chr11:114181182:T:C	rs2073848	T	C	T	Hoxd9_MA0913.1	2	1	-	8.293678209511443	6.616219768053342	GCAATTAAAG
chr11	114399620	114399621	chr11:114399621:C:A	rs187435473	C	A	C	Hoxd9_MA0913.1	19	0	+	0	0	.
chr11	114532951	114532952	chr11:114532952:G:A	rs11215037	G	A	G	Hoxd9_MA0913.1	15	0	+	0	0	.
chr11	114559972	114559973	chr11:114559973:A:G	chr11:114559973:A:G	A	G	A	Hoxd9_MA0913.1	7	1	+	7.801678332738202	0.9625338553838594	GCAATAAACA
chr11	114563235	114563236	chr11:114563236:G:C	rs746482992	G	C	G	Hoxd9_MA0913.1	13	0	+	0	0	.
chr11	114759167	114759168	chr11:114759168:A:T	rs10790034	A	T	A	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr11	115071825	115071826	chr11:115071826:A:G	rs2507878	A	G	G	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr11	115617021	115617022	chr11:115617022:C:T	rs2846895	C	T	C	Hoxd9_MA0913.1	15	0	+	0	0	.
chr11	115617024	115617025	chr11:115617025:A:G	rs924530539	A	G	A	Hoxd9_MA0913.1	18	0	+	0	0	.
chr11	115791345	115791346	chr11:115791346:A:G	rs4938219	A	G	A	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr11	116058239	116058240	chr11:116058240:T:C	rs11215773	T	C	T	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr11	116279643	116279644	chr11:116279644:A:G	rs7103346	A	G	G	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr11	116354722	116354723	chr11:116354723:G:A	rs1837509	G	A	G	Hoxd9_MA0913.1	29	0	+	0	0	.
chr11	116400508	116400509	chr11:116400509:T:C	rs533240	T	C	C	Hoxd9_MA0913.1	28	0	+	0	0	.
chr11	116645788	116645789	chr11:116645789:C:T	rs1789403	C	T	T	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr11	116853665	116853666	chr11:116853666:G:A	rs1218647124	G	A	G	Hoxd9_MA0913.1	15	0	-	0	0	.
chr11	116853684	116853685	chr11:116853685:A:G	rs772851448	A	G	A	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr11	116886531	116886532	chr11:116886532:A:G	rs11216174	A	G	G	Hoxd9_MA0913.1	2	1	+	9.209394307523764	7.531935866065666	GTAATAAAAT
chr11	117012999	117013000	chr11:117013000:C:T	rs7110042	C	T	C	Hoxd9_MA0913.1	25	0	-	0	0	.
chr11	117064433	117064434	chr11:117064434:A:T	rs149525524	A	T	A	Hoxd9_MA0913.1	2	1	+	8.2283733949328	1.7780293630820188	GCAATAAAGA
chr11	117073631	117073632	chr11:117073632:G:A	rs7935913	G	A	G	Hoxd9_MA0913.1	0	1	+	8.187202972822991	7.2394692494125295	GCAATTAAGA
chr11	117080668	117080669	chr11:117080669:T:C	rs7106662	T	C	C	Hoxd9_MA0913.1	25	0	+	0	0	.
chr11	117152770	117152771	chr11:117152771:A:C	rs7128382	A	C	A	Hoxd9_MA0913.1	11	0	+	0	0	.
chr11	117532519	117532520	chr11:117532520:G:T	rs3741280	G	T	T	Hoxd9_MA0913.1	16	0	+	0	0	.
chr11	117536023	117536024	chr11:117536024:C:G	rs688968	C	G	C	Hoxd9_MA0913.1	22	0	-	0	0	.
chr11	117536023	117536024	chr11:117536024:C:T	chr11:117536024:C:T	C	T	C	Hoxd9_MA0913.1	22	0	-	0	0	.
chr11	117671637	117671638	chr11:117671638:A:G	rs658274	A	G	A	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr11	117811033	117811034	chr11:117811034:G:A	rs71482116	G	A	a	Hoxd9_MA0913.1	1	1	-	8.123883530932645	7.775747903203619	GCGATAAAAA
chr11	117919626	117919627	chr11:117919627:C:T	rs11216620	C	T	C	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr11	117919650	117919651	chr11:117919651:C:T	rs544502564	C	T	C	Hoxd9_MA0913.1	20	0	+	0	0	.
chr11	118116325	118116326	chr11:118116326:G:A	rs12223789	G	A	G	Hoxd9_MA0913.1	24	0	+	0	0	.
chr11	118566368	118566369	chr11:118566369:A:C	rs112787374	A	C	A	Hoxd9_MA0913.1	5	1	+	8.079199333223738	4.644397561854368	GCAATAAATT
chr11	118566378	118566379	chr11:118566379:T:C	rs115951984	T	C	T	Hoxd9_MA0913.1	15	0	+	0	0	.
chr11	118826302	118826303	chr11:118826303:G:A	rs571470	G	A	g	Hoxd9_MA0913.1	17	0	+	0	0	.
chr11	118877103	118877104	chr11:118877104:A:G	rs6589706	A	G	G	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr11	119030021	119030022	chr11:119030022:T:A	rs533809523	T	A	T	Hoxd9_MA0913.1	12	0	-	0	0	.
chr11	119030022	119030023	chr11:119030023:A:T	rs558551432	A	T	A	Hoxd9_MA0913.1	11	0	-	0	0	.
chr11	119030025	119030026	chr11:119030026:T:C	rs73559201	T	C	T	Hoxd9_MA0913.1	8	1	-	8.568625789732518	6.995657212274576	ACAATTAAAT
chr11	119190253	119190254	chr11:119190254:T:C	rs45535039	T	C	T	Hoxd9_MA0913.1	28	0	-	0	0	.
chr11	119205016	119205017	chr11:119205017:T:A	rs79546026	T	A	T	Hoxd9_MA0913.1	27	0	+	0	0	.
chr11	119492175	119492176	chr11:119492176:T:C	rs549303	T	C	C	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr11	119506778	119506779	chr11:119506779:G:A	rs7931132	G	A	-	Hoxd9_MA0913.1	14	0	-	0	0	.
chr11	119864455	119864456	chr11:119864456:G:T	rs57952307	G	T	G	Hoxd9_MA0913.1	18	0	+	0	0	.
chr11	119888336	119888337	chr11:119888337:T:G	rs61899013	T	G	T	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr11	119888371	119888372	chr11:119888372:G:A	rs114525093	G	A	G	Hoxd9_MA0913.1	16	0	+	0	0	.
chr11	119906901	119906902	chr11:119906902:A:G	rs509809	A	G	A	Hoxd9_MA0913.1	3	1	+	8.719303557138431	6.891684616643326	GCAATAAAAC
chr11	119907834	119907835	chr11:119907835:G:T	rs4938738	G	T	G	Hoxd9_MA0913.1	25	0	-	0	0	.
chr11	119951140	119951141	chr11:119951141:G:A	rs7931873	G	A	G	Hoxd9_MA0913.1	11	0	+	0	0	.
chr11	119997192	119997193	chr11:119997193:G:T	rs11217621	G	T	G	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr11	119997227	119997228	chr11:119997228:C:G	rs11217622	C	G	G	Hoxd9_MA0913.1	21	0	+	0	0	.
chr11	120057082	120057083	chr11:120057083:A:G	rs662146	A	G	A	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr11	120318254	120318255	chr11:120318255:A:C	rs61898345	A	C	C	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr11	120335088	120335089	chr11:120335089:C:A	rs924791374	C	A	C	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr11	120460018	120460019	chr11:120460019:A:G	rs10892579	A	G	G	Hoxd9_MA0913.1	9	1	-	8.60979621184233	7.7715698337279715	ACAATAAAAT
chr11	120564312	120564313	chr11:120564313:G:A	rs7104127	G	A	G	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr11	120564314	120564315	chr11:120564315:A:C	rs7103821	A	C	C	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr11	120609042	120609043	chr11:120609043:A:G	rs74573926	A	G	A	Hoxd9_MA0913.1	26	0	-	0	0	.
chr11	120751669	120751670	chr11:120751670:A:G	rs7952159	A	G	G	Hoxd9_MA0913.1	16	0	+	0	0	.
chr11	120751675	120751676	chr11:120751676:C:T	rs12804621	C	T	C	Hoxd9_MA0913.1	22	0	+	0	0	.
chr11	120998860	120998861	chr11:120998861:T:C	rs11820008	T	C	T	Hoxd9_MA0913.1	8	1	-	9.412035922551908	7.839067345093966	GTAATTAAAA
chr11	121258138	121258139	chr11:121258139:G:A	rs73020048	G	A	G	Hoxd9_MA0913.1	21	0	-	0	0	.
chr11	121366203	121366204	chr11:121366204:C:G	rs4936624	C	G	G	Hoxd9_MA0913.1	16	0	+	0	0	.
chr11	121459377	121459378	chr11:121459378:A:G	rs3862606	A	G	A	Hoxd9_MA0913.1	5	1	+	8.334848631621252	2.1131854787253816	GCAATAAAAG
chr11	121515181	121515182	chr11:121515182:G:A	rs61905187	G	A	G	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr11	121722011	121722012	chr11:121722012:G:C	rs4627092	G	C	G	Hoxd9_MA0913.1	26	0	+	0	0	.
chr11	122161259	122161260	chr11:122161260:C:G	rs12273515	C	G	G	Hoxd9_MA0913.1	21	0	-	0	0	.
chr11	122305656	122305657	chr11:122305657:T:C	rs75578461	T	C	T	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr11	122305674	122305675	chr11:122305675:G:A	rs4127499	G	A	G	Hoxd9_MA0913.1	0	1	+	9.51635951314298	8.568625789732518	GCAATTAAAT
chr11	122307092	122307093	chr11:122307093:C:A	rs2510647	C	A	A	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr11	122688141	122688142	chr11:122688142:T:C	rs10750219	T	C	T	Hoxd9_MA0913.1	3	1	-	8.282172881897674	6.454553941402571	CCAATTAAAA
chr11	122821490	122821491	chr11:122821491:G:C	rs1916038	G	C	G	Hoxd9_MA0913.1	22	0	+	0	0	.
chr11	122882471	122882472	chr11:122882472:T:A	rs3134414	T	A	A	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr11	123026646	123026647	chr11:123026647:T:G	rs736973	T	G	T	Hoxd9_MA0913.1	22	0	+	0	0	.
chr11	123118539	123118540	chr11:123118540:G:C	rs12293887	G	C	C	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr11	123134905	123134906	chr11:123134906:C:T	rs12287633	C	T	C	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr11	123173274	123173275	chr11:123173275:T:C	rs189783172	T	C	T	Hoxd9_MA0913.1	3	1	-	7.7976343601680895	5.970015419672985	GCCATAAAAC
chr11	123196946	123196947	chr11:123196947:G:T	rs2155572	G	T	-	Hoxd9_MA0913.1	13	0	-	0	0	.
chr11	123202816	123202817	chr11:123202817:C:T	rs11824555	C	T	C	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr11	123308414	123308415	chr11:123308415:C:A	rs9888204	C	A	C	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr11	123351937	123351938	chr11:123351938:T:G	rs78596245	T	G	T	Hoxd9_MA0913.1	17	0	+	0	0	.
chr11	123363915	123363916	chr11:123363916:G:C	rs12284677	G	C	C	Hoxd9_MA0913.1	18	0	+	0	0	.
chr11	123378273	123378274	chr11:123378274:T:C	rs7944977	T	C	T	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr11	123461110	123461111	chr11:123461111:A:G	rs113740647	A	G	A	Hoxd9_MA0913.1	18	0	+	0	0	.
chr11	123531383	123531384	chr11:123531384:G:A	rs2846308	G	A	A	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr11	123567269	123567270	chr11:123567270:T:C	rs17455332	T	C	T	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr11	123756027	123756028	chr11:123756028:C:T	rs10502268	C	T	C	Hoxd9_MA0913.1	12	0	+	0	0	.
chr11	123839459	123839460	chr11:123839460:A:G	rs10790602	A	G	G	Hoxd9_MA0913.1	3	1	+	9.209394307523764	7.381775367028661	GTAATAAAAT
chr11	124302668	124302669	chr11:124302669:C:T	rs10893205	C	T	.	Hoxd9_MA0913.1	16	0	+	0	0	.
chr11	124812994	124812995	chr11:124812995:C:T	rs79417009	C	T	T	Hoxd9_MA0913.1	1	1	+	8.082713108822833	7.73457748109381	GCGATTAAAA
chr11	124813011	124813012	chr11:124813012:A:G	rs10893284	A	G	A	Hoxd9_MA0913.1	18	0	+	0	0	.
chr11	125230287	125230288	chr11:125230288:C:A	rs61912977	C	A	C	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr11	125345913	125345914	chr11:125345914:G:A	rs73618153	G	A	G	Hoxd9_MA0913.1	11	0	+	0	0	.
chr11	125542948	125542949	chr11:125542949:T:G	rs80057612	T	G	T	Hoxd9_MA0913.1	25	0	-	0	0	.
chr11	125592719	125592720	chr11:125592720:T:G	rs115754046	T	G	T	Hoxd9_MA0913.1	12	0	+	0	0	.
chr11	125592724	125592725	chr11:125592725:T:C	rs530119788	T	C	T	Hoxd9_MA0913.1	17	0	+	0	0	.
chr11	125592729	125592730	chr11:125592730:G:T	rs12270381	G	T	G	Hoxd9_MA0913.1	22	0	+	0	0	.
chr11	125592730	125592731	chr11:125592731:C:T	rs561182631	C	T	C	Hoxd9_MA0913.1	23	0	+	0	0	.
chr11	125599368	125599369	chr11:125599369:T:G	rs12280233	T	G	T	Hoxd9_MA0913.1	1	1	+	8.329997507299597	5.585568122743908	GTAATTAAAC
chr11	125903376	125903377	chr11:125903377:G:A	rs571079	G	A	A	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr11	125978981	125978982	chr11:125978982:G:A	rs145157571	G	A	G	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr11	125994641	125994642	chr11:125994642:C:T	rs2298477	C	T	C	Hoxd9_MA0913.1	1	1	+	7.943390935685037	7.595255307956012	GCAATTAAGT
chr11	126082177	126082178	chr11:126082178:T:C	rs10893475	T	C	T	Hoxd9_MA0913.1	8	1	-	9.209394307523764	7.636425730065822	GTAATAAAAT
chr11	126103378	126103379	chr11:126103379:G:A	rs17459831	G	A	G	Hoxd9_MA0913.1	29	0	-	0	0	.
chr11	126150214	126150215	chr11:126150215:A:G	rs595004	A	G	a	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr11	126194346	126194347	chr11:126194347:G:A	rs74789461	G	A	g	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr11	126197540	126197541	chr11:126197541:A:G	rs77023621	A	G	a	Hoxd9_MA0913.1	14	0	-	0	0	.
chr11	126283974	126283975	chr11:126283975:A:G	rs3017014	A	G	A	Hoxd9_MA0913.1	3	1	+	8.635860738282448	6.8082417977873435	GCCATAAAAT
chr11	126283979	126283980	chr11:126283980:A:G	rs8177353	A	G	A	Hoxd9_MA0913.1	8	1	+	8.635860738282448	7.062892160824505	GCCATAAAAT
chr11	126410649	126410650	chr11:126410650:T:C	rs3781781	T	C	T	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr11	126423343	126423344	chr11:126423344:A:T	rs752806	A	T	T	Hoxd9_MA0913.1	5	1	-	8.678133135028622	8.719303557138431	GCAATTAAAC
chr11	126490629	126490630	chr11:126490630:G:A	rs1000255	G	A	A	Hoxd9_MA0913.1	0	1	+	8.287725110553424	7.3399913871429625	GTCATAAAAT
chr11	126534028	126534029	chr11:126534029:A:T	rs596168	A	T	A	Hoxd9_MA0913.1	4	1	-	9.412035922551908	6.724784498365752	GTAATTAAAA
chr11	126956443	126956444	chr11:126956444:T:C	rs142770940	T	C	T	Hoxd9_MA0913.1	3	1	-	8.838502353310592	7.010883412815486	GCCATTAAAA
chr11	127028579	127028580	chr11:127028580:G:A	rs7945958	G	A	A	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr11	127101430	127101431	chr11:127101431:A:C	rs12225946	A	C	A	Hoxd9_MA0913.1	25	0	-	0	0	.
chr11	127458292	127458293	chr11:127458293:C:T	rs16831	C	T	C	Hoxd9_MA0913.1	0	1	-	8.2283733949328	7.280639671522341	GCAATAAAGA
chr11	127873024	127873025	chr11:127873025:T:A	rs4937266	T	A	A	Hoxd9_MA0913.1	13	0	-	0	0	.
chr11	127873050	127873051	chr11:127873051:C:T	rs71479903	C	T	C	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr11	128247683	128247684	chr11:128247684:C:A	rs12577896	C	A	C	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr11	128301138	128301139	chr11:128301139:T:A	rs34584722	T	A	T	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr11	128408959	128408960	chr11:128408960:A:G	rs1540218	A	G	G	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr11	128624968	128624969	chr11:128624969:G:A	rs75946154	G	A	G	Hoxd9_MA0913.1	20	0	+	0	0	.
chr11	128630852	128630853	chr11:128630853:T:A	rs76220822	T	A	T	Hoxd9_MA0913.1	29	0	-	0	0	.
chr11	128661065	128661066	chr11:128661066:A:G	rs612789	A	G	A	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr11	129277214	129277215	chr11:129277215:C:T	rs12273685	C	T	C	Hoxd9_MA0913.1	13	0	+	0	0	.
chr11	129619274	129619275	chr11:129619275:T:C	rs4936079	T	C	C	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr11	129743812	129743813	chr11:129743813:G:A	rs11221823	G	A	G	Hoxd9_MA0913.1	25	0	+	0	0	.
chr11	129789234	129789235	chr11:129789235:C:T	rs4936085	C	T	C	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr11	130023053	130023054	chr11:130023054:T:G	rs7948316	T	G	t	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr11	130315712	130315713	chr11:130315713:C:A	rs779302863	C	A	C	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr11	130316165	130316166	chr11:130316166:C:T	rs371602792	C	T	C	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr11	130384285	130384286	chr11:130384286:C:T	rs77110613	C	T	T	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr11	130384311	130384312	chr11:130384312:A:G	rs141687092	A	G	A	Hoxd9_MA0913.1	7	1	+	8.838502353310592	1.9993578759562485	GCCATTAAAA
chr11	130384331	130384332	chr11:130384332:G:C	rs116174767	G	C	G	Hoxd9_MA0913.1	27	0	+	0	0	.
chr11	130467021	130467022	chr11:130467022:C:G	rs4471430	C	G	C	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr11	130607320	130607321	chr11:130607321:G:A	rs559274701	G	A	G	Hoxd9_MA0913.1	9	1	+	8.334848631621252	9.801341972390743	GCAATAAAAG
chr11	130694800	130694801	chr11:130694801:T:G	rs112407001	T	G	T	Hoxd9_MA0913.1	26	0	-	0	0	.
chr11	130770061	130770062	chr11:130770062:C:T	rs7127732	C	T	C	Hoxd9_MA0913.1	24	0	+	0	0	.
chr11	130787061	130787062	chr11:130787062:C:G	chr11:130787062:C:G	C	G	C	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr11	131041653	131041654	chr11:131041654:G:T	rs185703348	G	T	G	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr11	131233191	131233192	chr11:131233192:T:C	rs7129945	T	C	T	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr11	131307808	131307809	chr11:131307809:T:C	rs1793589	T	C	C	Hoxd9_MA0913.1	20	0	-	0	0	.
chr11	131307823	131307824	chr11:131307824:T:G	rs1793844	T	G	G	Hoxd9_MA0913.1	5	1	-	7.4131794346509094	3.97837766328154	GCCATAAAAG
chr11	131307847	131307848	chr11:131307848:T:C	rs142207959	T	C	T	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr11	131452840	131452841	chr11:131452841:G:A	rs74530261	G	A	G	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr11	131483074	131483075	chr11:131483075:A:G	rs10791148	A	G	G	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr11	131522117	131522118	chr11:131522118:A:T	rs388076	A	T	A	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr11	131522128	131522129	chr11:131522129:C:T	rs414864	C	T	T	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr11	131646203	131646204	chr11:131646204:G:A	rs1567082	G	A	G	Hoxd9_MA0913.1	14	0	+	0	0	.
chr11	131748505	131748506	chr11:131748506:T:C	chr11:131748506:T:C	T	C	T	Hoxd9_MA0913.1	18	0	-	0	0	.
chr11	131771131	131771132	chr11:131771132:C:A	rs10750488	C	A	A	Hoxd9_MA0913.1	2	1	+	8.879672775420401	9.801341972390743	GCCATAAAAA
chr11	132075924	132075925	chr11:132075925:G:T	rs11222901	G	T	G	Hoxd9_MA0913.1	0	1	-	8.323343304007485	8.853608248980283	CCAATAAAAA
chr11	132100795	132100796	chr11:132100796:G:A	rs11222920	G	A	G	Hoxd9_MA0913.1	27	0	-	0	0	.
chr11	132134680	132134681	chr11:132134681:T:C	rs150122417	T	C	T	Hoxd9_MA0913.1	7	1	-	8.879672775420401	2.040528298066059	GCCATAAAAA
chr11	132141451	132141452	chr11:132141452:G:A	rs12804913	G	A	A	Hoxd9_MA0913.1	24	0	+	0	0	.
chr11	132622043	132622044	chr11:132622044:A:G	rs1793254	A	G	a	Hoxd9_MA0913.1	22	0	+	0	0	.
chr11	132910175	132910176	chr11:132910176:G:A	rs749422630	G	A	G	Hoxd9_MA0913.1	15	0	+	0	0	.
chr11	133024061	133024062	chr11:133024062:G:A	rs4418820	G	A	G	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr11	133793423	133793424	chr11:133793424:C:T	rs75665395	C	T	C	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr11	133794944	133794945	chr11:133794945:C:A	rs144011855	C	A	C	Hoxd9_MA0913.1	1	1	+	8.2283733949328	5.808555018907542	GCAATAAAGA
chr11	133836800	133836801	chr11:133836801:G:A	rs2723613	G	A	G	Hoxd9_MA0913.1	18	0	-	0	0	.
chr11	134004760	134004761	chr11:134004761:G:A	rs586802	G	A	G	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr11	134070301	134070302	chr11:134070302:G:C	rs35590990	G	C	G	Hoxd9_MA0913.1	21	0	-	0	0	.
chr11	134207474	134207475	chr11:134207475:C:T	rs138836990	C	T	C	Hoxd9_MA0913.1	28	0	+	0	0	.
chr11	134464679	134464680	chr11:134464680:G:A	rs67206424	G	A	G	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr11	134499275	134499276	chr11:134499276:A:G	rs11223873	A	G	A	Hoxd9_MA0913.1	19	0	+	0	0	.
chr11	134560638	134560639	chr11:134560639:C:T	rs56306313	C	T	C	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr11	134614652	134614653	chr11:134614653:C:G	rs2156702	C	G	G	Hoxd9_MA0913.1	18	0	+	0	0	.
chr11	134819329	134819330	chr11:134819330:G:A	rs34542693	G	A	G	Hoxd9_MA0913.1	21	0	-	0	0	.
chr11	134819349	134819350	chr11:134819350:G:A	rs115343355	G	A	G	Hoxd9_MA0913.1	1	1	-	8.879672775420401	8.531537147691377	GCCATAAAAA
chr11	134835522	134835523	chr11:134835523:C:T	rs11606147	C	T	C	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr11	134894357	134894358	chr11:134894358:G:A	rs4290247	G	A	A	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr11	134903151	134903152	chr11:134903152:G:A	rs1003114490	G	A	G	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr11	134976135	134976136	chr11:134976136:G:T	rs111319511	G	T	.	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr11	134979519	134979520	chr11:134979520:T:C	rs185156591	T	C	.	Hoxd9_MA0913.1	24	0	+	0	0	.
chr11	135028953	135028954	chr11:135028954:G:T	rs7111462	G	T	g	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr11	135033875	135033876	chr11:135033876:G:A	rs1478752	G	A	g	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr11	135048283	135048284	chr11:135048284:T:C	rs59247183	T	C	-	Hoxd9_MA0913.1	6	1	-	8.719303557138431	1.9038828893590902	GCAATAAAAC
chr12	110399	110400	chr12:110400:G:A	rs881741	G	A	.	Hoxd9_MA0913.1	24	0	-	0	0	.
chr12	269070	269071	chr12:269071:T:C	rs797757	T	C	T	Hoxd9_MA0913.1	25	0	-	0	0	.
chr12	293480	293481	chr12:293481:A:G	rs57022939	A	G	a	Hoxd9_MA0913.1	3	1	+	8.853608248980283	7.025989308485178	ACAATAAAAA
chr12	608334	608335	chr12:608335:A:G	rs11063848	A	G	A	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr12	926541	926542	chr12:926542:T:C	rs11571448	T	C	T	Hoxd9_MA0913.1	23	0	+	0	0	.
chr12	948667	948668	chr12:948668:T:A	rs11571388	T	A	T	Hoxd9_MA0913.1	24	0	-	0	0	.
chr12	963798	963799	chr12:963799:C:T	rs6489769	C	T	T	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr12	1163004	1163005	chr12:1163005:G:A	rs2906110	G	A	g	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr12	1179060	1179061	chr12:1179061:A:T	rs1859449	A	T	T	Hoxd9_MA0913.1	28	0	-	0	0	.
chr12	1319186	1319187	chr12:1319187:C:T	rs7975854	C	T	T	Hoxd9_MA0913.1	14	0	-	0	0	.
chr12	1532444	1532445	chr12:1532445:A:G	rs116388853	A	G	A	Hoxd9_MA0913.1	3	1	+	8.812437826870472	6.984818886375368	ACAATTAAAA
chr12	1607473	1607474	chr12:1607474:T:G	rs905781813	T	G	T	Hoxd9_MA0913.1	8	1	-	8.246554688443613	6.246891048791072	GTCATTAAAT
chr12	2136469	2136470	chr12:2136470:A:G	rs12579529	A	G	A	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr12	2212701	2212702	chr12:2212702:A:T	rs1016388	A	T	T	Hoxd9_MA0913.1	28	0	-	0	0	.
chr12	2249638	2249639	chr12:2249639:T:C	rs78661331	T	C	C	Hoxd9_MA0913.1	17	0	-	0	0	.
chr12	2264643	2264644	chr12:2264644:C:A	rs80191236	C	A	A	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr12	2290128	2290129	chr12:2290129:G:T	rs116698755	G	T	G	Hoxd9_MA0913.1	26	0	-	0	0	.
chr12	2538304	2538305	chr12:2538305:C:T	rs4765952	C	T	T	Hoxd9_MA0913.1	9	1	-	8.293678209511443	9.760171550280933	GCAATTAAAG
chr12	2794218	2794219	chr12:2794219:G:A	rs3814252	G	A	G	Hoxd9_MA0913.1	27	0	-	0	0	.
chr12	3105398	3105399	chr12:3105399:T:C	rs880159	T	C	T	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr12	3249009	3249010	chr12:3249010:C:G	rs61907358	C	G	C	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr12	3370655	3370656	chr12:3370656:T:C	rs12300812	T	C	T	Hoxd9_MA0913.1	9	1	+	8.60979621184233	7.7715698337279715	ACAATAAAAT
chr12	3681710	3681711	chr12:3681711:C:T	rs10491973	C	T	C	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr12	3700951	3700952	chr12:3700952:T:C	rs11609130	T	C	T	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr12	3724145	3724146	chr12:3724146:G:A	rs11062777	G	A	G	Hoxd9_MA0913.1	9	1	-	8.678133135028622	9.51635951314298	GCAATTAAAC
chr12	3920569	3920570	chr12:3920570:G:T	rs117522862	G	T	G	Hoxd9_MA0913.1	17	0	+	0	0	.
chr12	3966849	3966850	chr12:3966850:T:C	rs11836084	T	C	T	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr12	4306918	4306919	chr12:4306919:A:G	rs10505729	A	G	A	Hoxd9_MA0913.1	15	0	+	0	0	.
chr12	4327552	4327553	chr12:4327553:C:T	rs79109815	C	T	C	Hoxd9_MA0913.1	20	0	-	0	0	.
chr12	4850458	4850459	chr12:4850459:A:T	rs12310734	A	T	A	Hoxd9_MA0913.1	21	0	+	0	0	.
chr12	4918890	4918891	chr12:4918891:T:C	rs2359473	T	C	T	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr12	5036487	5036488	chr12:5036488:A:G	rs9788172	A	G	A	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr12	5084701	5084702	chr12:5084702:C:A	chr12:5084702:C:A	C	A	C	Hoxd9_MA0913.1	23	0	-	0	0	.
chr12	5122615	5122616	chr12:5122616:T:C	rs11063512	T	C	T	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr12	5378084	5378085	chr12:5378085:C:T	rs145261109	C	T	C	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr12	5437403	5437404	chr12:5437404:G:C	rs55924827	G	C	C	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr12	5520623	5520624	chr12:5520624:T:A	rs79296729	T	A	T	Hoxd9_MA0913.1	28	0	-	0	0	.
chr12	5556163	5556164	chr12:5556164:A:T	rs11063753	A	T	A	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr12	5634042	5634043	chr12:5634043:T:G	rs74056074	T	G	T	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr12	5634047	5634048	chr12:5634048:G:A	rs1558508	G	A	A	Hoxd9_MA0913.1	0	1	+	8.246554688443613	7.298820965033153	GTCATTAAAT
chr12	5799036	5799037	chr12:5799037:C:T	rs10744694	C	T	T	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr12	5976346	5976347	chr12:5976347:A:G	rs216855	A	G	G	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr12	6171417	6171418	chr12:6171418:A:G	rs10744699	A	G	a	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr12	6184155	6184156	chr12:6184156:T:C	rs4417359	T	C	T	Hoxd9_MA0913.1	18	0	-	0	0	.
chr12	6288833	6288834	chr12:6288834:C:T	rs61918205	C	T	c	Hoxd9_MA0913.1	24	0	-	0	0	.
chr12	6367725	6367726	chr12:6367726:A:G	rs7963228	A	G	A	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr12	6493565	6493566	chr12:6493566:C:G	rs11545054	C	G	G	Hoxd9_MA0913.1	21	0	-	0	0	.
chr12	7485878	7485879	chr12:7485879:A:C	rs78288163	A	C	.	Hoxd9_MA0913.1	14	0	+	0	0	.
chr12	7836511	7836512	chr12:7836512:G:T	rs569811102	G	T	G	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr12	7873996	7873997	chr12:7873997:T:C	rs7313244	T	C	c	Hoxd9_MA0913.1	29	0	+	0	0	.
chr12	7971665	7971666	chr12:7971666:A:T	rs11056714	A	T	A	Hoxd9_MA0913.1	6	1	+	8.812437826870472	6.389117879336487	ACAATTAAAA
chr12	7971687	7971688	chr12:7971688:G:A	rs7975985	G	A	A	Hoxd9_MA0913.1	28	0	+	0	0	.
chr12	7988838	7988839	chr12:7988839:C:T	rs10846285	C	T	C	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr12	8109338	8109339	chr12:8109339:A:G	rs2889629	A	G	A	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr12	8544370	8544371	chr12:8544371:T:C	rs181094482	T	C	T	Hoxd9_MA0913.1	23	0	-	0	0	.
chr12	8544371	8544372	chr12:8544372:G:T	rs186601251	G	T	G	Hoxd9_MA0913.1	22	0	-	0	0	.
chr12	8572745	8572746	chr12:8572746:A:C	rs111565526	A	C	A	Hoxd9_MA0913.1	14	0	+	0	0	.
chr12	9128768	9128769	chr12:9128769:G:A	rs74060477	G	A	G	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr12	9169310	9169311	chr12:9169311:G:C	rs10771386	G	C	C	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr12	9283042	9283043	chr12:9283043:T:C	rs7960104	T	C	.	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr12	9347902	9347903	chr12:9347903:G:A	rs1991192	G	A	a	Hoxd9_MA0913.1	1	1	-	8.2283733949328	7.880237767203775	GCAATAAAGA
chr12	9615321	9615322	chr12:9615322:T:G	rs1863876	T	G	T	Hoxd9_MA0913.1	24	0	-	0	0	.
chr12	9690306	9690307	chr12:9690307:T:A	rs74065337	T	A	T	Hoxd9_MA0913.1	26	0	-	0	0	.
chr12	9712560	9712561	chr12:9712561:C:A	rs10772062	C	A	C	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr12	9731813	9731814	chr12:9731814:A:G	rs4763840	A	G	a	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr12	9785050	9785051	chr12:9785051:C:T	rs7972330	C	T	C	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr12	9793224	9793225	chr12:9793225:A:G	rs10772150	A	G	A	Hoxd9_MA0913.1	15	0	-	0	0	.
chr12	9793256	9793257	chr12:9793257:G:A	rs10772151	G	A	G	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr12	10098338	10098339	chr12:10098339:G:T	rs7313750	G	T	T	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr12	10153164	10153165	chr12:10153165:G:A	rs10845055	G	A	G	Hoxd9_MA0913.1	29	0	-	0	0	.
chr12	10208566	10208567	chr12:10208567:A:C	rs73058063	A	C	A	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr12	10385279	10385280	chr12:10385280:C:A	rs2126889	C	A	C	Hoxd9_MA0913.1	14	0	-	0	0	.
chr12	10393325	10393326	chr12:10393326:C:T	rs2733840	C	T	T	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr12	10409489	10409490	chr12:10409490:A:C	rs1841958	A	C	C	Hoxd9_MA0913.1	9	1	-	9.55752993525279	8.334848631621252	GCAATAAAAT
chr12	10541220	10541221	chr12:10541221:C:A	rs182453668	C	A	C	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr12	10650612	10650613	chr12:10650613:T:C	rs10772340	T	C	T	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr12	10670308	10670309	chr12:10670309:T:C	rs7967162	T	C	c	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr12	10941103	10941104	chr12:10941104:A:G	rs12322464	A	G	A	Hoxd9_MA0913.1	25	0	+	0	0	.
chr12	11172309	11172310	chr12:11172310:T:C	rs189538298	T	C	T	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr12	11172473	11172474	chr12:11172474:G:A	rs116957160	G	A	G	Hoxd9_MA0913.1	19	0	-	0	0	.
chr12	11561719	11561720	chr12:11561720:G:A	rs4763707	G	A	G	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr12	11561731	11561732	chr12:11561732:A:T	rs77210579	A	T	A	Hoxd9_MA0913.1	11	0	+	0	0	.
chr12	11578168	11578169	chr12:11578169:A:G	rs17745379	A	G	A	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr12	11812005	11812006	chr12:11812006:G:A	rs16907305	G	A	A	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr12	11816635	11816636	chr12:11816636:T:C	rs2710293	T	C	C	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr12	11881792	11881793	chr12:11881793:C:T	rs866596170	C	T	C	Hoxd9_MA0913.1	20	0	-	0	0	.
chr12	11950423	11950424	chr12:11950424:G:A	rs193043100	G	A	G	Hoxd9_MA0913.1	29	0	-	0	0	.
chr12	11996047	11996048	chr12:11996048:T:G	rs77842080	T	G	T	Hoxd9_MA0913.1	19	0	-	0	0	.
chr12	12028117	12028118	chr12:12028118:C:T	rs35279937	C	T	c	Hoxd9_MA0913.1	16	0	+	0	0	.
chr12	12226358	12226359	chr12:12226359:G:C	rs2160589	G	C	C	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr12	12328215	12328216	chr12:12328216:T:C	rs79140529	T	C	T	Hoxd9_MA0913.1	3	1	-	8.282172881897674	6.454553941402571	CCAATTAAAA
chr12	12376762	12376763	chr12:12376763:A:G	chr12:12376763:A:G	A	G	A	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr12	12403268	12403269	chr12:12403269:C:T	rs1017478664	C	T	C	Hoxd9_MA0913.1	25	0	-	0	0	.
chr12	12450949	12450950	chr12:12450950:A:G	rs55946646	A	G	A	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr12	12628877	12628878	chr12:12628878:A:G	rs34946234	A	G	A	Hoxd9_MA0913.1	20	0	-	0	0	.
chr12	12633255	12633256	chr12:12633256:G:A	rs34975957	G	A	G	Hoxd9_MA0913.1	0	1	+	9.453206344661718	8.505472621251258	GTAATAAAAA
chr12	12719979	12719980	chr12:12719980:A:G	chr12:12719980:A:G	A	G	A	Hoxd9_MA0913.1	14	0	+	0	0	.
chr12	12741531	12741532	chr12:12741532:C:T	rs1861181	C	T	T	Hoxd9_MA0913.1	0	1	-	9.801341972390743	8.853608248980283	GCAATAAAAA
chr12	12810809	12810810	chr12:12810810:G:A	rs9943824	G	A	G	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr12	13193511	13193512	chr12:13193512:T:G	rs7300383	T	G	G	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr12	13486622	13486623	chr12:13486623:A:G	rs7971950	A	G	A	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr12	13573813	13573814	chr12:13573814:C:G	rs7953807	C	G	C	Hoxd9_MA0913.1	27	0	-	0	0	.
chr12	13718547	13718548	chr12:13718548:A:T	rs2268117	A	T	A	Hoxd9_MA0913.1	13	0	-	0	0	.
chr12	13942279	13942280	chr12:13942280:C:T	rs4764041	C	T	C	Hoxd9_MA0913.1	17	0	-	0	0	.
chr12	13995261	13995262	chr12:13995262:A:G	rs12368933	A	G	a	Hoxd9_MA0913.1	24	0	-	0	0	.
chr12	14224583	14224584	chr12:14224584:G:A	rs7300394	G	A	g	Hoxd9_MA0913.1	24	0	-	0	0	.
chr12	14308177	14308178	chr12:14308178:A:G	chr12:14308178:A:G	A	G	A	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr12	14325261	14325262	chr12:14325262:G:A	rs12578356	G	A	G	Hoxd9_MA0913.1	22	0	-	0	0	.
chr12	14326791	14326792	chr12:14326792:A:G	rs371810000	A	G	-	Hoxd9_MA0913.1	22	0	-	0	0	.
chr12	14367264	14367265	chr12:14367265:C:T	rs1178243679	C	T	C	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr12	14391141	14391142	chr12:14391142:A:G	rs79900388	A	G	A	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr12	14503833	14503834	chr12:14503834:G:C	rs1600	G	C	G	Hoxd9_MA0913.1	28	0	+	0	0	.
chr12	14752135	14752136	chr12:14752136:A:T	rs7966152	A	T	a	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr12	14879683	14879684	chr12:14879684:A:G	rs10846075	A	G	A	Hoxd9_MA0913.1	16	0	+	0	0	.
chr12	14924208	14924209	chr12:14924209:A:T	rs2417403	A	T	A	Hoxd9_MA0913.1	14	0	-	0	0	.
chr12	14924240	14924241	chr12:14924241:A:G	rs2417404	A	G	G	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr12	14952625	14952626	chr12:14952626:A:T	rs4763407	A	T	T	Hoxd9_MA0913.1	11	0	-	0	0	.
chr12	14958743	14958744	chr12:14958744:T:A	rs115439320	T	A	T	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr12	15355808	15355809	chr12:15355809:G:A	rs55716164	G	A	A	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr12	15634541	15634542	chr12:15634542:C:T	rs73311006	C	T	C	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr12	15651057	15651058	chr12:15651058:T:C	rs4237955	T	C	T	Hoxd9_MA0913.1	25	0	+	0	0	.
chr12	15701868	15701869	chr12:15701869:G:A	rs944991236	G	A	G	Hoxd9_MA0913.1	25	0	+	0	0	.
chr12	15911070	15911071	chr12:15911071:A:T	rs7980868	A	T	A	Hoxd9_MA0913.1	24	0	-	0	0	.
chr12	16613550	16613551	chr12:16613551:T:C	rs17607432	T	C	T	Hoxd9_MA0913.1	5	1	-	8.853608248980283	2.631945096084414	ACAATAAAAA
chr12	17028324	17028325	chr12:17028325:A:G	rs113846845	A	G	A	Hoxd9_MA0913.1	17	0	+	0	0	.
chr12	17511663	17511664	chr12:17511664:A:G	rs590405	A	G	A	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr12	17719715	17719716	chr12:17719716:A:G	rs61925684	A	G	A	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr12	18259672	18259673	chr12:18259673:C:A	rs3813897	C	A	A	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr12	18296953	18296954	chr12:18296954:C:G	rs7978843	C	G	C	Hoxd9_MA0913.1	27	0	-	0	0	.
chr12	18296962	18296963	chr12:18296963:T:C	rs11044011	T	C	C	Hoxd9_MA0913.1	18	0	-	0	0	.
chr12	18483439	18483440	chr12:18483440:C:T	rs7964566	C	T	T	Hoxd9_MA0913.1	15	0	+	0	0	.
chr12	18555505	18555506	chr12:18555506:T:G	rs143426417	T	G	T	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr12	18556197	18556198	chr12:18556198:A:G	rs11044181	A	G	A	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr12	18556200	18556201	chr12:18556201:A:G	rs114259704	A	G	A	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr12	18682945	18682946	chr12:18682946:C:T	rs1487068	C	T	C	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr12	18794695	18794696	chr12:18794696:G:T	rs80349883	G	T	G	Hoxd9_MA0913.1	1	1	-	7.943390935685037	5.523572559659778	GCAATTAAGT
chr12	18920101	18920102	chr12:18920102:C:T	rs75001290	C	T	C	Hoxd9_MA0913.1	23	0	+	0	0	.
chr12	19026483	19026484	chr12:19026484:G:A	rs10743300	G	A	C	Hoxd9_MA0913.1	24	0	-	0	0	.
chr12	19201615	19201616	chr12:19201616:T:C	rs1586843	T	C	T	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr12	19301472	19301473	chr12:19301473:G:A	rs2638440	G	A	G	Hoxd9_MA0913.1	12	0	+	0	0	.
chr12	19369853	19369854	chr12:19369854:T:C	rs71539469	T	C	C	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr12	19450015	19450016	chr12:19450016:G:C	rs7964170	G	C	C	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr12	19509252	19509253	chr12:19509253:G:A	rs10841250	G	A	a	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr12	19571097	19571098	chr12:19571098:C:A	rs7399200	C	A	C	Hoxd9_MA0913.1	12	0	-	0	0	.
chr12	19665352	19665353	chr12:19665353:G:A	rs74064290	G	A	G	Hoxd9_MA0913.1	14	0	-	0	0	.
chr12	19672072	19672073	chr12:19672073:A:G	rs7488934	A	G	G	Hoxd9_MA0913.1	15	0	+	0	0	.
chr12	19739543	19739544	chr12:19739544:G:T	rs4237920	G	T	T	Hoxd9_MA0913.1	22	0	+	0	0	.
chr12	19793486	19793487	chr12:19793487:T:C	rs10841361	T	C	C	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr12	19800258	19800259	chr12:19800259:A:G	rs7316716	A	G	G	Hoxd9_MA0913.1	5	1	+	8.531537147691377	2.3098739947955087	GTCATAAAAA
chr12	19887005	19887006	chr12:19887006:T:A	rs16922248	T	A	A	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr12	19923363	19923364	chr12:19923364:G:A	rs10841409	G	A	A	Hoxd9_MA0913.1	9	1	-	8.719303557138431	9.55752993525279	GCAATAAAAC
chr12	19967483	19967484	chr12:19967484:C:T	rs17368727	C	T	C	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr12	20018667	20018668	chr12:20018668:A:G	rs11044985	A	G	A	Hoxd9_MA0913.1	11	0	-	0	0	.
chr12	20018686	20018687	chr12:20018687:G:A	rs61910876	G	A	G	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr12	20018689	20018690	chr12:20018690:C:T	rs16922515	C	T	C	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr12	20053966	20053967	chr12:20053967:T:G	rs61910923	T	G	G	Hoxd9_MA0913.1	19	0	-	0	0	.
chr12	20233645	20233646	chr12:20233646:C:G	rs77959308	C	G	C	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr12	20255046	20255047	chr12:20255047:T:C	rs1366147	T	C	T	Hoxd9_MA0913.1	2	1	-	8.812437826870472	7.1349793854123735	ACAATTAAAA
chr12	20436455	20436456	chr12:20436456:A:G	rs11045245	A	G	A	Hoxd9_MA0913.1	13	0	-	0	0	.
chr12	20549196	20549197	chr12:20549197:T:A	rs11045300	T	A	T	Hoxd9_MA0913.1	13	0	-	0	0	.
chr12	21459046	21459047	chr12:21459047:T:C	rs6487228	T	C	T	Hoxd9_MA0913.1	25	0	+	0	0	.
chr12	21509813	21509814	chr12:21509814:C:G	rs10841837	C	G	C	Hoxd9_MA0913.1	23	0	+	0	0	.
chr12	21718570	21718571	chr12:21718571:A:G	rs146348692	A	G	A	Hoxd9_MA0913.1	20	0	-	0	0	.
chr12	21718575	21718576	chr12:21718576:T:A	rs10841889	T	A	A	Hoxd9_MA0913.1	15	0	-	0	0	.
chr12	22481956	22481957	chr12:22481957:G:T	rs10466795	G	T	T	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr12	22678528	22678529	chr12:22678529:G:A	rs4963827	G	A	A	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr12	22834528	22834529	chr12:22834529:A:C	rs2433644	A	C	A	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr12	23209870	23209871	chr12:23209871:C:T	rs147891767	C	T	c	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr12	23584864	23584865	chr12:23584865:C:T	rs11046993	C	T	C	Hoxd9_MA0913.1	10	0	-	0	0	.
chr12	23584889	23584890	chr12:23584890:C:T	rs11046994	C	T	T	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr12	23706196	23706197	chr12:23706197:A:G	rs1382825	A	G	A	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr12	23792337	23792338	chr12:23792338:G:A	rs117059998	G	A	G	Hoxd9_MA0913.1	14	0	+	0	0	.
chr12	23946129	23946130	chr12:23946130:T:C	rs16926892	T	C	T	Hoxd9_MA0913.1	5	1	-	9.801341972390743	3.5796788194948737	GCAATAAAAA
chr12	24036977	24036978	chr12:24036978:A:G	rs17482874	A	G	A	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr12	24080544	24080545	chr12:24080545:G:A	rs11047249	G	A	G	Hoxd9_MA0913.1	13	0	-	0	0	.
chr12	24481371	24481372	chr12:24481372:T:C	rs10771092	T	C	T	Hoxd9_MA0913.1	22	0	-	0	0	.
chr12	24931520	24931521	chr12:24931521:C:G	rs12366540	C	G	C	Hoxd9_MA0913.1	15	0	+	0	0	.
chr12	24956638	24956639	chr12:24956639:G:C	rs4590976	G	C	g	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr12	25251908	25251909	chr12:25251909:C:G	rs150940108	C	G	C	Hoxd9_MA0913.1	13	0	+	0	0	.
chr12	25502234	25502235	chr12:25502235:T:C	rs1479510	T	C	C	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr12	25616361	25616362	chr12:25616362:A:C	rs2086279	A	C	A	Hoxd9_MA0913.1	13	0	+	0	0	.
chr12	25852592	25852593	chr12:25852593:C:A	rs12227123	C	A	C	Hoxd9_MA0913.1	1	1	+	8.635860738282448	6.216042362257189	GCCATAAAAT
chr12	25957676	25957677	chr12:25957677:G:A	rs12424238	G	A	G	Hoxd9_MA0913.1	27	0	-	0	0	.
chr12	26045466	26045467	chr12:26045467:C:T	rs7486150	C	T	C	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr12	26062557	26062558	chr12:26062558:T:C	rs1001347431	T	C	T	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr12	26137124	26137125	chr12:26137125:C:G	rs61915716	C	G	C	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr12	26256466	26256467	chr12:26256467:T:C	rs11616178	T	C	T	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr12	26340880	26340881	chr12:26340881:C:T	rs11048473	C	T	C	Hoxd9_MA0913.1	26	0	-	0	0	.
chr12	26537631	26537632	chr12:26537632:A:C	rs10842750	A	C	C	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr12	26636338	26636339	chr12:26636339:T:C	rs7133594	T	C	T	Hoxd9_MA0913.1	11	0	-	0	0	.
chr12	26668946	26668947	chr12:26668947:G:A	rs7134564	G	A	G	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr12	26739131	26739132	chr12:26739132:G:A	chr12:26739132:G:A	G	A	G	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr12	26803560	26803561	chr12:26803561:T:A	rs61920601	T	A	T	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr12	26831608	26831609	chr12:26831609:G:A	rs77462307	G	A	G	Hoxd9_MA0913.1	18	0	+	0	0	.
chr12	27088149	27088150	chr12:27088150:C:T	rs116522438	C	T	C	Hoxd9_MA0913.1	28	0	+	0	0	.
chr12	27089558	27089559	chr12:27089559:C:T	rs41323744	C	T	C	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr12	27208099	27208100	chr12:27208100:C:A	rs7304468	C	A	A	Hoxd9_MA0913.1	13	0	+	0	0	.
chr12	27208101	27208102	chr12:27208102:T:A	rs10400461	T	A	T	Hoxd9_MA0913.1	15	0	+	0	0	.
chr12	27324772	27324773	chr12:27324773:C:T	rs189589246	C	T	C	Hoxd9_MA0913.1	22	0	+	0	0	.
chr12	27414630	27414631	chr12:27414631:A:G	rs7297533	A	G	A	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr12	27498365	27498366	chr12:27498366:A:T	rs366448	A	T	T	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr12	27498856	27498857	chr12:27498857:C:T	rs149752424	C	T	C	Hoxd9_MA0913.1	14	0	+	0	0	.
chr12	27538339	27538340	chr12:27538340:C:G	rs66913539	C	G	G	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr12	27601533	27601534	chr12:27601534:C:G	rs17223967	C	G	C	Hoxd9_MA0913.1	26	0	-	0	0	.
chr12	27748295	27748296	chr12:27748296:T:C	rs7968601	T	C	T	Hoxd9_MA0913.1	4	1	+	8.32301137036169	5.030877118586712	GCAATAAATA
chr12	27907678	27907679	chr12:27907679:T:C	rs7964976	T	C	T	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr12	27968394	27968395	chr12:27968395:G:C	rs3794276	G	C	G	Hoxd9_MA0913.1	1	1	-	8.853608248980283	5.761043236695571	ACAATAAAAA
chr12	28065867	28065868	chr12:28065868:T:C	rs7134771	T	C	C	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr12	28065869	28065870	chr12:28065870:G:A	rs7304264	G	A	A	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr12	28072531	28072532	chr12:28072532:A:G	rs406172	A	G	G	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr12	28086640	28086641	chr12:28086641:T:G	rs10843092	T	G	T	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr12	28172370	28172371	chr12:28172371:A:G	rs11049398	A	G	A	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr12	28379854	28379855	chr12:28379855:G:A	rs7978110	G	A	G	Hoxd9_MA0913.1	12	0	-	0	0	.
chr12	28497631	28497632	chr12:28497632:C:T	rs10506036	C	T	T	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr12	28498981	28498982	chr12:28498982:T:C	rs11049669	T	C	T	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr12	28535353	28535354	chr12:28535354:G:A	rs11049698	G	A	G	Hoxd9_MA0913.1	27	0	-	0	0	.
chr12	28568773	28568774	chr12:28568774:T:G	rs1912782	T	G	T	Hoxd9_MA0913.1	7	1	-	8.594690316172638	5.3008435644542065	GCCATTAAAT
chr12	28568791	28568792	chr12:28568792:G:A	rs1355471	G	A	A	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr12	28601746	28601747	chr12:28601747:G:C	rs4429095	G	C	C	Hoxd9_MA0913.1	18	0	-	0	0	.
chr12	28788462	28788463	chr12:28788463:A:G	rs4931094	A	G	A	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr12	28828271	28828272	chr12:28828272:C:A	rs10843249	C	A	C	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr12	28869737	28869738	chr12:28869738:G:A	rs150485776	G	A	G	Hoxd9_MA0913.1	11	0	+	0	0	.
chr12	29033703	29033704	chr12:29033704:T:C	rs17653960	T	C	T	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr12	29217674	29217675	chr12:29217675:G:A	rs58527616	G	A	G	Hoxd9_MA0913.1	18	0	+	0	0	.
chr12	29235018	29235019	chr12:29235019:T:C	rs56224606	T	C	T	Hoxd9_MA0913.1	19	0	+	0	0	.
chr12	29381633	29381634	chr12:29381634:T:G	rs139130761	T	G	T	Hoxd9_MA0913.1	5	1	-	8.853608248980283	5.418806477610913	ACAATAAAAA
chr12	29719860	29719861	chr12:29719861:C:T	rs7959334	C	T	T	Hoxd9_MA0913.1	0	1	-	9.801341972390743	8.853608248980283	GCAATAAAAA
chr12	29742317	29742318	chr12:29742318:T:A	rs1438515	T	A	T	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr12	29768801	29768802	chr12:29768802:A:G	rs4931216	A	G	G	Hoxd9_MA0913.1	27	0	+	0	0	.
chr12	29826350	29826351	chr12:29826351:A:T	rs10771587	A	T	A	Hoxd9_MA0913.1	18	0	+	0	0	.
chr12	30269915	30269916	chr12:30269916:T:C	rs1429630	T	C	C	Hoxd9_MA0913.1	15	0	-	0	0	.
chr12	30269942	30269943	chr12:30269943:A:G	rs4931311	A	G	A	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr12	30410461	30410462	chr12:30410462:A:G	rs7962202	A	G	A	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr12	30708198	30708199	chr12:30708199:T:C	rs2882855	T	C	C	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr12	30751353	30751354	chr12:30751354:C:A	rs111721369	C	A	C	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr12	30751373	30751374	chr12:30751374:C:T	rs7952744	C	T	C	Hoxd9_MA0913.1	18	0	+	0	0	.
chr12	30755479	30755480	chr12:30755480:C:A	rs73082007	C	A	C	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr12	30792275	30792276	chr12:30792276:A:G	rs57932585	A	G	A	Hoxd9_MA0913.1	8	1	-	8.32301137036169	7.801678332738202	GCAATAAATA
chr12	30799865	30799866	chr12:30799866:A:C	rs256656	A	C	A	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr12	30819975	30819976	chr12:30819976:A:G	rs1385524	A	G	G	Hoxd9_MA0913.1	5	1	+	8.2283733949328	2.006710242036932	GCAATAAAGA
chr12	30889635	30889636	chr12:30889636:G:A	rs9668041	G	A	G	Hoxd9_MA0913.1	26	0	-	0	0	.
chr12	30939439	30939440	chr12:30939440:T:C	rs2241325	T	C	T	Hoxd9_MA0913.1	25	0	+	0	0	.
chr12	31074545	31074546	chr12:31074546:G:T	rs7305885	G	T	G	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr12	31246787	31246788	chr12:31246788:G:A	rs11051357	G	A	G	Hoxd9_MA0913.1	29	0	-	0	0	.
chr12	31249066	31249067	chr12:31249067:C:T	rs80234073	C	T	c	Hoxd9_MA0913.1	27	0	+	0	0	.
chr12	31361064	31361065	chr12:31361065:G:A	rs2090772	G	A	A	Hoxd9_MA0913.1	19	0	+	0	0	.
chr12	31405096	31405097	chr12:31405097:C:G	rs2568896	C	G	G	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr12	31658888	31658889	chr12:31658889:A:G	rs35517071	A	G	A	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr12	31658893	31658894	chr12:31658894:A:T	rs116963538	A	T	A	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr12	31676805	31676806	chr12:31676806:T:G	rs61930411	T	G	T	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr12	31858752	31858753	chr12:31858753:C:T	rs12311361	C	T	C	Hoxd9_MA0913.1	1	1	+	8.2283733949328	7.880237767203775	GCAATAAAGA
chr12	31894544	31894545	chr12:31894545:G:T	rs7977472	G	T	G	Hoxd9_MA0913.1	1	1	-	7.973723031895638	5.553904655870381	GCAGTAAAAA
chr12	31915827	31915828	chr12:31915828:A:G	rs61929540	A	G	A	Hoxd9_MA0913.1	28	0	-	0	0	.
chr12	32098246	32098247	chr12:32098247:A:G	rs2683489	A	G	A	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr12	32151500	32151501	chr12:32151501:A:G	rs7961369	A	G	A	Hoxd9_MA0913.1	23	0	-	0	0	.
chr12	32198444	32198445	chr12:32198445:G:T	rs10844151	G	T	G	Hoxd9_MA0913.1	0	1	+	9.801341972390743	6.764199276437873	GCAATAAAAA
chr12	32250643	32250644	chr12:32250644:G:A	rs7135618	G	A	A	Hoxd9_MA0913.1	1	1	-	8.2283733949328	7.880237767203775	GCAATAAAGA
chr12	32271488	32271489	chr12:32271489:A:T	rs13328922	A	T	A	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr12	32436472	32436473	chr12:32436473:G:A	rs1500874	G	A	G	Hoxd9_MA0913.1	13	0	+	0	0	.
chr12	32568933	32568934	chr12:32568934:C:T	rs2102043	C	T	T	Hoxd9_MA0913.1	22	0	+	0	0	.
chr12	32724137	32724138	chr12:32724138:C:T	rs7300090	C	T	c	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr12	33247298	33247299	chr12:33247299:C:T	rs7315423	C	T	T	Hoxd9_MA0913.1	27	0	+	0	0	.
chr12	33287705	33287706	chr12:33287706:T:C	rs1379541	T	C	C	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr12	33588524	33588525	chr12:33588525:T:G	rs1200441393	T	G	T	Hoxd9_MA0913.1	21	0	-	0	0	.
chr12	33994998	33994999	chr12:33994999:C:T	rs11053035	C	T	C	Hoxd9_MA0913.1	0	1	-	9.55752993525279	8.60979621184233	GCAATAAAAT
chr12	36042578	36042579	chr12:36042579:G:T	rs1167853133	G	T	.	Hoxd9_MA0913.1	29	0	-	0	0	.
chr12	38263440	38263441	chr12:38263441:A:G	rs60068856	A	G	A	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr12	38290318	38290319	chr12:38290319:A:T	rs7955128	A	T	a	Hoxd9_MA0913.1	22	0	+	0	0	.
chr12	38325269	38325270	chr12:38325270:G:A	rs11183330	G	A	g	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr12	38586884	38586885	chr12:38586885:A:G	rs7307821	A	G	A	Hoxd9_MA0913.1	18	0	-	0	0	.
chr12	38624456	38624457	chr12:38624457:C:T	rs1875609	C	T	C	Hoxd9_MA0913.1	11	0	-	0	0	.
chr12	38628467	38628468	chr12:38628468:G:A	rs2653737	G	A	A	Hoxd9_MA0913.1	2	1	-	7.4131794346509094	1.8845045997704688	GCCATAAAAG
chr12	38731088	38731089	chr12:38731089:C:T	rs1684405	C	T	C	Hoxd9_MA0913.1	25	0	-	0	0	.
chr12	38759285	38759286	chr12:38759286:C:T	rs826847	C	T	C	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr12	38844627	38844628	chr12:38844628:C:T	rs35792180	C	T	C	Hoxd9_MA0913.1	20	0	+	0	0	.
chr12	39123903	39123904	chr12:39123904:C:T	rs10783619	C	T	T	Hoxd9_MA0913.1	1	1	+	8.123883530932645	7.775747903203619	GCGATAAAAA
chr12	39124386	39124387	chr12:39124387:C:T	rs767450115	C	T	C	Hoxd9_MA0913.1	22	0	-	0	0	.
chr12	39389464	39389465	chr12:39389465:A:T	rs17127096	A	T	A	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr12	39781068	39781069	chr12:39781069:A:G	rs11173546	A	G	A	Hoxd9_MA0913.1	17	0	-	0	0	.
chr12	39886149	39886150	chr12:39886150:G:C	rs2029971	G	C	G	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr12	39993317	39993318	chr12:39993318:T:G	rs10506141	T	G	T	Hoxd9_MA0913.1	3	1	-	7.4131794346509094	2.9469487642508536	GCCATAAAAG
chr12	40204541	40204542	chr12:40204542:A:T	rs1491940	A	T	A	Hoxd9_MA0913.1	5	1	-	8.187202972822991	8.2283733949328	GCAATTAAGA
chr12	41014800	41014801	chr12:41014801:C:T	rs78037279	C	T	C	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr12	41336111	41336112	chr12:41336112:C:G	rs2141105	C	G	G	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr12	41344968	41344969	chr12:41344969:A:G	rs7959175	A	G	G	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr12	41525236	41525237	chr12:41525237:T:G	rs10506193	T	G	T	Hoxd9_MA0913.1	16	0	-	0	0	.
chr12	41605970	41605971	chr12:41605971:C:T	rs366921	C	T	C	Hoxd9_MA0913.1	20	0	+	0	0	.
chr12	41746783	41746784	chr12:41746784:T:C	rs188348399	T	C	T	Hoxd9_MA0913.1	14	0	+	0	0	.
chr12	41863654	41863655	chr12:41863655:G:A	rs4297521	G	A	g	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr12	42198787	42198788	chr12:42198788:T:G	rs712122	T	G	G	Hoxd9_MA0913.1	21	0	+	0	0	.
chr12	42198795	42198796	chr12:42198796:G:A	rs712123	G	A	A	Hoxd9_MA0913.1	29	0	+	0	0	.
chr12	42362713	42362714	chr12:42362714:C:G	rs11181459	C	G	C	Hoxd9_MA0913.1	14	0	-	0	0	.
chr12	42422314	42422315	chr12:42422315:G:A	chr12:42422315:G:A	G	A	G	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr12	42698413	42698414	chr12:42698414:G:A	rs80158047	G	A	G	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr12	42933577	42933578	chr12:42933578:T:C	rs10748343	T	C	C	Hoxd9_MA0913.1	13	0	-	0	0	.
chr12	42958323	42958324	chr12:42958324:A:T	rs73131724	A	T	A	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr12	42961700	42961701	chr12:42961701:T:C	rs1533714	T	C	T	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr12	43112051	43112052	chr12:43112052:G:A	rs1183240	G	A	G	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr12	43165434	43165435	chr12:43165435:A:C	rs10880428	A	C	C	Hoxd9_MA0913.1	24	0	+	0	0	.
chr12	43180396	43180397	chr12:43180397:A:G	rs11181913	A	G	A	Hoxd9_MA0913.1	11	0	+	0	0	.
chr12	43841441	43841442	chr12:43841442:T:C	rs2199390	T	C	T	Hoxd9_MA0913.1	4	1	+	9.168223885413955	5.8760896336389745	GTAATTAAAT
chr12	43857303	43857304	chr12:43857304:T:G	rs1731454	T	G	T	Hoxd9_MA0913.1	28	0	-	0	0	.
chr12	44063768	44063769	chr12:44063769:A:T	rs842199	A	T	T	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr12	44153306	44153307	chr12:44153307:T:A	rs11182426	T	A	-	Hoxd9_MA0913.1	3	1	-	8.853608248980283	5.2392683798513	ACAATAAAAA
chr12	44612823	44612824	chr12:44612824:G:A	rs1167978843	G	A	G	Hoxd9_MA0913.1	13	0	-	0	0	.
chr12	45217818	45217819	chr12:45217819:A:G	rs3759080	A	G	G	Hoxd9_MA0913.1	12	0	+	0	0	.
chr12	45402328	45402329	chr12:45402329:A:G	rs12580320	A	G	A	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr12	45409325	45409326	chr12:45409326:G:A	rs61925708	G	A	G	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr12	45463711	45463712	chr12:45463712:T:C	rs12817931	T	C	T	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr12	45539646	45539647	chr12:45539647:A:G	rs2408251	A	G	A	Hoxd9_MA0913.1	15	0	-	0	0	.
chr12	45732238	45732239	chr12:45732239:G:T	rs150917708	G	T	T	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr12	46104064	46104065	chr12:46104065:A:G	rs7134217	A	G	G	Hoxd9_MA0913.1	26	0	-	0	0	.
chr12	46149299	46149300	chr12:46149300:A:G	rs1345090	A	G	A	Hoxd9_MA0913.1	12	0	+	0	0	.
chr12	46367540	46367541	chr12:46367541:C:T	rs1873793	C	T	C	Hoxd9_MA0913.1	22	0	+	0	0	.
chr12	46388812	46388813	chr12:46388813:A:G	rs145135968	A	G	A	Hoxd9_MA0913.1	12	0	+	0	0	.
chr12	46608562	46608563	chr12:46608563:G:A	rs765707	G	A	G	Hoxd9_MA0913.1	13	0	-	0	0	.
chr12	46903477	46903478	chr12:46903478:G:C	rs11183655	G	C	G	Hoxd9_MA0913.1	23	0	-	0	0	.
chr12	46934017	46934018	chr12:46934018:G:A	rs10881013	G	A	G	Hoxd9_MA0913.1	1	1	-	8.879672775420401	8.531537147691377	GCCATAAAAA
chr12	47020996	47020997	chr12:47020997:G:T	rs2711707	G	T	T	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr12	47021643	47021644	chr12:47021644:A:G	rs192103983	A	G	a	Hoxd9_MA0913.1	10	0	+	0	0	.
chr12	47038893	47038894	chr12:47038894:A:G	rs10785650	A	G	g	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr12	47038897	47038898	chr12:47038898:A:G	rs146494851	A	G	A	Hoxd9_MA0913.1	2	1	+	9.801341972390743	8.123883530932645	GCAATAAAAA
chr12	47102554	47102555	chr12:47102555:G:A	rs2040674	G	A	A	Hoxd9_MA0913.1	0	1	+	7.7976343601680895	6.84990063675763	GCCATAAAAC
chr12	47164423	47164424	chr12:47164424:T:C	rs4768777	T	C	T	Hoxd9_MA0913.1	11	0	+	0	0	.
chr12	47287113	47287114	chr12:47287114:C:T	rs73095913	C	T	C	Hoxd9_MA0913.1	0	1	-	9.51635951314298	8.568625789732518	GCAATTAAAT
chr12	47308970	47308971	chr12:47308971:A:G	rs1123746	A	G	A	Hoxd9_MA0913.1	2	1	+	9.801341972390743	8.123883530932645	GCAATAAAAA
chr12	47378621	47378622	chr12:47378622:C:T	rs552159283	C	T	C	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr12	47715880	47715881	chr12:47715881:T:G	rs67201012	T	G	G	Hoxd9_MA0913.1	3	1	-	7.984561357794846	3.5183306873947915	GCAATAAAGT
chr12	47715884	47715885	chr12:47715885:G:A	rs73104188	G	A	A	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr12	47889972	47889973	chr12:47889973:G:T	rs7965943	G	T	T	Hoxd9_MA0913.1	24	0	-	0	0	.
chr12	47990169	47990170	chr12:47990170:T:A	rs1793924	T	A	A	Hoxd9_MA0913.1	12	0	-	0	0	.
chr12	47996396	47996397	chr12:47996397:T:C	rs369438810	T	C	T	Hoxd9_MA0913.1	16	0	+	0	0	.
chr12	48027623	48027624	chr12:48027624:G:T	rs12305182	G	T	G	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr12	48027665	48027666	chr12:48027666:C:T	rs4760611	C	T	C	Hoxd9_MA0913.1	29	0	+	0	0	.
chr12	48084323	48084324	chr12:48084324:T:C	rs118077444	T	C	T	Hoxd9_MA0913.1	25	0	+	0	0	.
chr12	48795783	48795784	chr12:48795784:A:T	rs191841246	A	T	A	Hoxd9_MA0913.1	14	0	+	0	0	.
chr12	48863008	48863009	chr12:48863009:G:A	rs3782360	G	A	G	Hoxd9_MA0913.1	24	0	+	0	0	.
chr12	49019702	49019703	chr12:49019703:C:T	rs7975791	C	T	C	Hoxd9_MA0913.1	20	0	-	0	0	.
chr12	49813342	49813343	chr12:49813343:T:C	rs11169162	T	C	T	Hoxd9_MA0913.1	20	0	-	0	0	.
chr12	49863763	49863764	chr12:49863764:G:C	rs1563168	G	C	G	Hoxd9_MA0913.1	12	0	-	0	0	.
chr12	49867985	49867986	chr12:49867986:C:T	rs1454193	C	T	C	Hoxd9_MA0913.1	21	0	-	0	0	.
chr12	50175478	50175479	chr12:50175479:A:G	rs74493606	A	G	A	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr12	50222887	50222888	chr12:50222888:A:C	rs902558499	A	C	A	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr12	50222891	50222892	chr12:50222892:G:C	rs139147577	G	C	G	Hoxd9_MA0913.1	0	1	+	8.635860738282448	7.15786206989919	GCCATAAAAT
chr12	50570710	50570711	chr12:50570711:A:G	rs3935138	A	G	C	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr12	50610325	50610326	chr12:50610326:A:G	rs10876071	A	G	A	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr12	50613783	50613784	chr12:50613784:C:T	rs79471269	C	T	C	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr12	50638033	50638034	chr12:50638034:C:G	rs10876074	C	G	C	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr12	50691242	50691243	chr12:50691243:C:T	rs74417964	C	T	C	Hoxd9_MA0913.1	0	1	-	8.246554688443613	7.298820965033153	GTCATTAAAT
chr12	50762796	50762797	chr12:50762797:A:G	rs4768866	A	G	A	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr12	50924964	50924965	chr12:50924965:G:A	rs114502389	G	A	G	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr12	50924972	50924973	chr12:50924973:G:A	rs149309422	G	A	G	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr12	51219350	51219351	chr12:51219351:A:G	rs61276106	A	G	A	Hoxd9_MA0913.1	23	0	-	0	0	.
chr12	51420251	51420252	chr12:51420252:A:G	rs6580834	A	G	G	Hoxd9_MA0913.1	29	0	-	0	0	.
chr12	51878294	51878295	chr12:51878295:T:A	rs772216	T	A	A	Hoxd9_MA0913.1	3	1	-	8.323343304007485	4.709003434878502	CCAATAAAAA
chr12	52220449	52220450	chr12:52220450:G:C	rs10876249	G	C	C	Hoxd9_MA0913.1	26	0	-	0	0	.
chr12	52226525	52226526	chr12:52226526:G:A	rs79052289	G	A	A	Hoxd9_MA0913.1	29	0	+	0	0	.
chr12	52454607	52454608	chr12:52454608:T:C	rs447003	T	C	C	Hoxd9_MA0913.1	4	1	+	8.60979621184233	5.317661960067349	ACAATAAAAT
chr12	52526418	52526419	chr12:52526419:T:C	rs628232	T	C	C	Hoxd9_MA0913.1	26	0	-	0	0	.
chr12	52748437	52748438	chr12:52748438:T:C	rs673077	T	C	T	Hoxd9_MA0913.1	9	1	-	9.801341972390743	8.334848631621252	GCAATAAAAA
chr12	53391952	53391953	chr12:53391953:C:G	rs118140185	C	G	C	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr12	53412870	53412871	chr12:53412871:C:T	rs17695156	C	T	c	Hoxd9_MA0913.1	22	0	+	0	0	.
chr12	53533104	53533105	chr12:53533105:G:A	rs12422400	G	A	G	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr12	53601706	53601707	chr12:53601707:A:G	rs11170608	A	G	A	Hoxd9_MA0913.1	3	1	+	8.719303557138431	6.891684616643326	GCAATAAAAC
chr12	53677351	53677352	chr12:53677352:C:T	rs529172440	C	T	C	Hoxd9_MA0913.1	23	0	+	0	0	.
chr12	53677543	53677544	chr12:53677544:T:C	rs146886097	T	C	T	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr12	53678462	53678463	chr12:53678463:G:T	rs115121573	G	T	G	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr12	53770599	53770600	chr12:53770600:A:G	rs11834946	A	G	A	Hoxd9_MA0913.1	3	1	+	8.323343304007485	6.495724363512382	CCAATAAAAA
chr12	54059001	54059002	chr12:54059002:G:C	rs147122715	G	C	G	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr12	54448557	54448558	chr12:54448558:C:T	rs1309192698	C	T	C	Hoxd9_MA0913.1	23	0	+	0	0	.
chr12	54826466	54826467	chr12:54826467:A:G	rs10876619	A	G	A	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr12	54935169	54935170	chr12:54935170:C:T	rs2087245	C	T	C	Hoxd9_MA0913.1	20	0	-	0	0	.
chr12	55176698	55176699	chr12:55176699:G:A	rs11171353	G	A	g	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr12	55744795	55744796	chr12:55744796:A:C	rs61134397	A	C	A	Hoxd9_MA0913.1	17	0	-	0	0	.
chr12	56359089	56359090	chr12:56359090:A:G	rs57870697	A	G	G	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr12	56646190	56646191	chr12:56646191:C:A	rs181185330	C	A	C	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr12	56689257	56689258	chr12:56689258:T:C	chr12:56689258:T:C	T	C	T	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr12	56816819	56816820	chr12:56816820:A:G	rs77192336	A	G	A	Hoxd9_MA0913.1	27	0	-	0	0	.
chr12	57127373	57127374	chr12:57127374:C:T	rs558509985	C	T	C	Hoxd9_MA0913.1	14	0	+	0	0	.
chr12	57610779	57610780	chr12:57610780:C:G	rs7314872	C	G	C	Hoxd9_MA0913.1	27	0	-	0	0	.
chr12	57749066	57749067	chr12:57749067:A:G	rs2069507	A	G	A	Hoxd9_MA0913.1	12	0	+	0	0	.
chr12	57749070	57749071	chr12:57749071:C:A	rs2069506	C	A	C	Hoxd9_MA0913.1	16	0	+	0	0	.
chr12	57801167	57801168	chr12:57801168:A:C	rs141546672	A	C	A	Hoxd9_MA0913.1	27	0	-	0	0	.
chr12	57801168	57801169	chr12:57801169:G:C	rs759190171	G	C	G	Hoxd9_MA0913.1	26	0	-	0	0	.
chr12	57939689	57939690	chr12:57939690:G:A	rs543965478	G	A	.	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr12	57981120	57981121	chr12:57981121:T:C	rs12827878	T	C	T	Hoxd9_MA0913.1	16	0	-	0	0	.
chr12	58233690	58233691	chr12:58233691:T:G	rs4421784	T	G	T	Hoxd9_MA0913.1	2	1	-	8.2283733949328	7.306704197962459	GCAATAAAGA
chr12	58365157	58365158	chr12:58365158:A:C	rs150968684	A	C	A	Hoxd9_MA0913.1	6	1	+	9.801341972390743	5.326765109722537	GCAATAAAAA
chr12	58365180	58365181	chr12:58365181:T:C	rs1148534	T	C	T	Hoxd9_MA0913.1	29	0	+	0	0	.
chr12	58387293	58387294	chr12:58387294:G:A	rs150561609	G	A	G	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr12	58425137	58425138	chr12:58425138:G:T	rs11172600	G	T	-	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr12	58923516	58923517	chr12:58923517:A:G	rs10877188	A	G	A	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr12	59036583	59036584	chr12:59036584:G:A	rs10506357	G	A	G	Hoxd9_MA0913.1	16	0	-	0	0	.
chr12	59314924	59314925	chr12:59314925:A:G	rs4760269	A	G	A	Hoxd9_MA0913.1	10	0	+	0	0	.
chr12	59500043	59500044	chr12:59500044:A:C	rs10877300	A	C	T	Hoxd9_MA0913.1	10	0	-	0	0	.
chr12	59619221	59619222	chr12:59619222:A:T	rs7965740	A	T	T	Hoxd9_MA0913.1	3	1	+	8.2283733949328	4.614033525803817	GCAATAAAGA
chr12	59675697	59675698	chr12:59675698:T:G	rs79205592	T	G	G	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr12	60173622	60173623	chr12:60173623:T:A	rs17602381	T	A	T	Hoxd9_MA0913.1	23	0	-	0	0	.
chr12	60264062	60264063	chr12:60264063:G:C	rs61923127	G	C	G	Hoxd9_MA0913.1	29	0	-	0	0	.
chr12	60594393	60594394	chr12:60594394:G:A	rs61925033	G	A	G	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr12	60685010	60685011	chr12:60685011:T:C	rs166659	T	C	C	Hoxd9_MA0913.1	12	0	+	0	0	.
chr12	61389155	61389156	chr12:61389156:T:A	rs1606949	T	A	A	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr12	62312398	62312399	chr12:62312399:A:G	rs10431510	A	G	G	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr12	62314135	62314136	chr12:62314136:G:A	rs10877824	G	A	A	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr12	62713026	62713027	chr12:62713027:A:G	rs75725524	A	G	A	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr12	62731293	62731294	chr12:62731294:A:C	chr12:62731294:A:C	A	C	A	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr12	62731296	62731297	chr12:62731297:G:C	rs73127939	G	C	G	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr12	62935820	62935821	chr12:62935821:C:T	rs1043340947	C	T	C	Hoxd9_MA0913.1	16	0	-	0	0	.
chr12	63655967	63655968	chr12:63655968:C:T	rs61935160	C	T	C	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr12	63672744	63672745	chr12:63672745:T:C	rs4107158	T	C	T	Hoxd9_MA0913.1	12	0	+	0	0	.
chr12	63917459	63917460	chr12:63917460:A:G	rs148796261	A	G	A	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr12	63917473	63917474	chr12:63917474:A:C	rs79924387	A	C	A	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr12	63921351	63921352	chr12:63921352:C:T	chr12:63921352:C:T	C	T	C	Hoxd9_MA0913.1	16	0	-	0	0	.
chr12	63921376	63921377	chr12:63921377:G:T	rs17099917	G	T	T	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr12	63942352	63942353	chr12:63942353:T:C	rs73115814	T	C	T	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr12	64090051	64090052	chr12:64090052:T:C	rs11175257	T	C	C	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr12	64092308	64092309	chr12:64092309:G:A	rs73321310	G	A	A	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr12	64147179	64147180	chr12:64147180:A:G	rs7131691	A	G	A	Hoxd9_MA0913.1	3	1	+	9.168223885413955	7.340604944918851	GTAATTAAAT
chr12	64229727	64229728	chr12:64229728:A:G	rs1826733	A	G	a	Hoxd9_MA0913.1	27	0	-	0	0	.
chr12	64404051	64404052	chr12:64404052:G:C	rs12306555	G	C	G	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr12	64626119	64626120	chr12:64626120:T:G	rs17223244	T	G	T	Hoxd9_MA0913.1	9	1	-	8.282172881897674	7.200134466645363	CCAATTAAAA
chr12	64638963	64638964	chr12:64638964:G:C	rs11175486	G	C	G	Hoxd9_MA0913.1	18	0	+	0	0	.
chr12	64651253	64651254	chr12:64651254:T:G	rs1797689	T	G	G	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr12	64679382	64679383	chr12:64679383:A:G	rs112204838	A	G	a	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr12	64714379	64714380	chr12:64714380:G:C	rs1061743	G	C	G	Hoxd9_MA0913.1	21	0	+	0	0	.
chr12	65330440	65330441	chr12:65330441:C:T	rs7967829	C	T	T	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr12	65414803	65414804	chr12:65414804:A:G	rs11175755	A	G	G	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr12	65414823	65414824	chr12:65414824:G:A	chr12:65414824:G:A	G	A	G	Hoxd9_MA0913.1	14	0	+	0	0	.
chr12	65431065	65431066	chr12:65431066:A:G	rs1389799	A	G	A	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr12	65586015	65586016	chr12:65586016:C:A	rs17766022	C	A	C	Hoxd9_MA0913.1	17	0	+	0	0	.
chr12	65593477	65593478	chr12:65593478:G:A	rs148256983	G	A	G	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr12	65634176	65634177	chr12:65634177:A:G	rs7957441	A	G	A	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr12	65929060	65929061	chr12:65929061:G:A	rs12812630	G	A	G	Hoxd9_MA0913.1	0	1	+	9.760171550280933	8.812437826870472	GCAATTAAAA
chr12	66107467	66107468	chr12:66107468:A:C	chr12:66107468:A:C	A	C	A	Hoxd9_MA0913.1	28	0	+	0	0	.
chr12	66153111	66153112	chr12:66153112:A:G	rs1370126	A	G	G	Hoxd9_MA0913.1	25	0	+	0	0	.
chr12	66456849	66456850	chr12:66456850:T:C	rs883230	T	C	C	Hoxd9_MA0913.1	2	1	-	9.760171550280933	8.082713108822833	GCAATTAAAA
chr12	66539761	66539762	chr12:66539762:C:T	rs7300413	C	T	C	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr12	66881555	66881556	chr12:66881556:T:C	rs1252276	T	C	T	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr12	67053249	67053250	chr12:67053250:T:C	rs918131902	T	C	t	Hoxd9_MA0913.1	21	0	+	0	0	.
chr12	67452348	67452349	chr12:67452349:T:A	rs1882282	T	A	T	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr12	67457433	67457434	chr12:67457434:C:G	rs78418655	C	G	C	Hoxd9_MA0913.1	10	0	+	0	0	.
chr12	67653863	67653864	chr12:67653864:C:G	rs12820502	C	G	C	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr12	67934554	67934555	chr12:67934555:G:A	rs10161160	G	A	A	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr12	67968509	67968510	chr12:67968510:A:G	rs117274283	A	G	A	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr12	68041060	68041061	chr12:68041061:G:T	rs10878729	G	T	G	Hoxd9_MA0913.1	16	0	-	0	0	.
chr12	68210182	68210183	chr12:68210183:C:G	rs11570948	C	G	C	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr12	68260943	68260944	chr12:68260944:A:G	rs4913430	A	G	G	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr12	68777758	68777759	chr12:68777759:A:G	rs74649637	A	G	A	Hoxd9_MA0913.1	3	1	+	8.281840948251881	6.454222007756778	GCAATTAATA
chr12	68838199	68838200	chr12:68838200:G:A	rs3730646	G	A	G	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr12	68957654	68957655	chr12:68957655:C:T	rs4913302	C	T	C	Hoxd9_MA0913.1	13	0	-	0	0	.
chr12	69008305	69008306	chr12:69008306:T:C	rs557408477	T	C	T	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr12	69056984	69056985	chr12:69056985:T:C	rs12815427	T	C	T	Hoxd9_MA0913.1	12	0	-	0	0	.
chr12	69151671	69151672	chr12:69151672:G:A	rs117787389	G	A	G	Hoxd9_MA0913.1	14	0	+	0	0	.
chr12	69155420	69155421	chr12:69155421:C:T	rs10878925	C	T	C	Hoxd9_MA0913.1	27	0	-	0	0	.
chr12	69392839	69392840	chr12:69392840:T:A	rs11177645	T	A	T	Hoxd9_MA0913.1	6	1	-	8.812437826870472	6.389117879336487	ACAATTAAAA
chr12	69511348	69511349	chr12:69511349:A:G	rs11829505	A	G	A	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr12	69602838	69602839	chr12:69602839:T:G	rs710762	T	G	T	Hoxd9_MA0913.1	8	1	-	8.323343304007485	6.323679664354945	CCAATAAAAA
chr12	69603234	69603235	chr12:69603235:C:G	rs139468282	C	G	C	Hoxd9_MA0913.1	0	1	+	8.323343304007485	9.801341972390743	CCAATAAAAA
chr12	69684391	69684392	chr12:69684392:C:T	rs710714	C	T	C	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr12	69704478	69704479	chr12:69704479:C:A	rs775440	C	A	A	Hoxd9_MA0913.1	10	0	-	0	0	.
chr12	69927440	69927441	chr12:69927441:T:A	rs1269212	T	A	A	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr12	69947333	69947334	chr12:69947334:A:G	rs2068155	A	G	G	Hoxd9_MA0913.1	12	0	-	0	0	.
chr12	69984610	69984611	chr12:69984611:C:T	rs710692	C	T	T	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr12	70081107	70081108	chr12:70081108:G:A	rs3098308	G	A	G	Hoxd9_MA0913.1	17	0	-	0	0	.
chr12	70251611	70251612	chr12:70251612:C:T	rs10506584	C	T	C	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr12	70560683	70560684	chr12:70560684:C:T	rs17108344	C	T	C	Hoxd9_MA0913.1	16	0	-	0	0	.
chr12	70572174	70572175	chr12:70572175:A:G	rs1125122	A	G	A	Hoxd9_MA0913.1	13	0	+	0	0	.
chr12	70774107	70774108	chr12:70774108:T:C	rs7132092	T	C	T	Hoxd9_MA0913.1	23	0	+	0	0	.
chr12	70890876	70890877	chr12:70890877:G:A	rs10879214	G	A	A	Hoxd9_MA0913.1	27	0	-	0	0	.
chr12	70983241	70983242	chr12:70983242:G:A	rs75510271	G	A	G	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr12	71005174	71005175	chr12:71005175:C:A	rs6581984	C	A	A	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr12	71107966	71107967	chr12:71107967:A:G	chr12:71107967:A:G	A	G	A	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr12	71216761	71216762	chr12:71216762:A:G	rs3913059	A	G	A	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr12	71335549	71335550	chr12:71335550:T:C	rs74380633	T	C	C	Hoxd9_MA0913.1	25	0	+	0	0	.
chr12	71426799	71426800	chr12:71426800:G:A	rs111983142	G	A	G	Hoxd9_MA0913.1	14	0	-	0	0	.
chr12	71745803	71745804	chr12:71745804:T:A	rs10748182	T	A	T	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr12	71780289	71780290	chr12:71780290:C:G	rs10879336	C	G	C	Hoxd9_MA0913.1	26	0	+	0	0	.
chr12	71787525	71787526	chr12:71787526:A:G	rs12310799	A	G	A	Hoxd9_MA0913.1	27	0	+	0	0	.
chr12	72242821	72242822	chr12:72242822:A:G	rs35377161	A	G	A	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr12	72257006	72257007	chr12:72257007:T:A	rs112477270	T	A	T	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr12	72263601	72263602	chr12:72263602:A:G	rs4254109	A	G	G	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr12	72338223	72338224	chr12:72338224:A:G	rs17727047	A	G	A	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr12	72664405	72664406	chr12:72664406:G:A	rs306028	G	A	A	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr12	73663686	73663687	chr12:73663687:A:G	rs2730525	A	G	A	Hoxd9_MA0913.1	10	0	-	0	0	.
chr12	74039302	74039303	chr12:74039303:A:G	rs117522646	A	G	a	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr12	74356312	74356313	chr12:74356313:C:A	rs12828562	C	A	C	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr12	74372640	74372641	chr12:74372641:C:A	rs6582217	C	A	C	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr12	74392447	74392448	chr12:74392448:A:T	rs35633901	A	T	A	Hoxd9_MA0913.1	13	0	-	0	0	.
chr12	74466442	74466443	chr12:74466443:A:G	rs1381040	A	G	A	Hoxd9_MA0913.1	18	0	-	0	0	.
chr12	74491436	74491437	chr12:74491437:G:A	rs2605330	G	A	G	Hoxd9_MA0913.1	25	0	+	0	0	.
chr12	74608736	74608737	chr12:74608737:G:A	rs1493815	G	A	A	Hoxd9_MA0913.1	29	0	-	0	0	.
chr12	74864311	74864312	chr12:74864312:T:C	rs144585413	T	C	C	Hoxd9_MA0913.1	21	0	+	0	0	.
chr12	74896275	74896276	chr12:74896276:C:T	rs2136037	C	T	T	Hoxd9_MA0913.1	11	0	+	0	0	.
chr12	75512411	75512412	chr12:75512412:T:C	rs3809121	T	C	T	Hoxd9_MA0913.1	12	0	-	0	0	.
chr12	75528436	75528437	chr12:75528437:A:G	rs1552040	A	G	G	Hoxd9_MA0913.1	8	1	+	9.55752993525279	7.984561357794846	GCAATAAAAT
chr12	75571290	75571291	chr12:75571291:T:C	rs58248634	T	C	T	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr12	75666749	75666750	chr12:75666750:G:C	rs3736625	G	C	G	Hoxd9_MA0913.1	22	0	-	0	0	.
chr12	75780355	75780356	chr12:75780356:T:C	rs10467183	T	C	T	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr12	75818068	75818069	chr12:75818069:T:C	rs11611462	T	C	T	Hoxd9_MA0913.1	26	0	+	0	0	.
chr12	75825813	75825814	chr12:75825814:A:G	rs17115753	A	G	A	Hoxd9_MA0913.1	20	0	-	0	0	.
chr12	75832049	75832050	chr12:75832050:T:C	rs2141707	T	C	T	Hoxd9_MA0913.1	17	0	+	0	0	.
chr12	75886132	75886133	chr12:75886133:A:T	rs6582312	A	T	T	Hoxd9_MA0913.1	11	0	+	0	0	.
chr12	75899336	75899337	chr12:75899337:A:G	rs10506662	A	G	A	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr12	76003324	76003325	chr12:76003325:C:G	rs1344796	C	G	C	Hoxd9_MA0913.1	25	0	+	0	0	.
chr12	76106749	76106750	chr12:76106750:C:G	rs61926813	C	G	G	Hoxd9_MA0913.1	22	0	+	0	0	.
chr12	76259056	76259057	chr12:76259057:T:C	rs73131541	T	C	T	Hoxd9_MA0913.1	21	0	-	0	0	.
chr12	76696312	76696313	chr12:76696313:G:A	rs11115052	G	A	G	Hoxd9_MA0913.1	21	0	+	0	0	.
chr12	77012433	77012434	chr12:77012434:A:C	rs310873	A	C	C	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr12	77088107	77088108	chr12:77088108:A:G	rs310850	A	G	G	Hoxd9_MA0913.1	4	1	-	8.678133135028622	5.385998883253641	GCAATTAAAC
chr12	77536106	77536107	chr12:77536107:G:A	rs61573566	G	A	A	Hoxd9_MA0913.1	25	0	-	0	0	.
chr12	77592458	77592459	chr12:77592459:T:C	rs11105822	T	C	T	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr12	77608620	77608621	chr12:77608621:A:C	rs140183519	A	C	A	Hoxd9_MA0913.1	18	0	+	0	0	.
chr12	77745674	77745675	chr12:77745675:G:T	rs10859303	G	T	G	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr12	77814513	77814514	chr12:77814514:A:C	rs12810670	A	C	A	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr12	77849102	77849103	chr12:77849103:C:G	rs115151211	C	G	G	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr12	77895941	77895942	chr12:77895942:T:A	rs78522504	T	A	T	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr12	77940272	77940273	chr12:77940273:G:C	rs1731740	G	C	C	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr12	78090340	78090341	chr12:78090341:A:G	rs300486	A	G	G	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr12	78121102	78121103	chr12:78121103:G:A	rs113377574	G	A	G	Hoxd9_MA0913.1	0	1	+	8.287725110553424	7.3399913871429625	GTCATAAAAT
chr12	78146703	78146704	chr12:78146704:A:G	rs11108476	A	G	A	Hoxd9_MA0913.1	1	1	-	9.209394307523764	9.55752993525279	GTAATAAAAT
chr12	78148813	78148814	chr12:78148814:T:G	rs444864	T	G	T	Hoxd9_MA0913.1	21	0	-	0	0	.
chr12	78178868	78178869	chr12:78178869:G:C	rs75010110	G	C	g	Hoxd9_MA0913.1	18	0	+	0	0	.
chr12	78178869	78178870	chr12:78178870:G:T	rs3825190	G	T	g	Hoxd9_MA0913.1	19	0	+	0	0	.
chr12	78178874	78178875	chr12:78178875:A:G	rs61936251	A	G	a	Hoxd9_MA0913.1	24	0	+	0	0	.
chr12	78245163	78245164	chr12:78245164:C:T	rs2203027	C	T	C	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr12	78461821	78461822	chr12:78461822:A:G	rs11109877	A	G	A	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr12	78584766	78584767	chr12:78584767:G:A	rs11608671	G	A	G	Hoxd9_MA0913.1	0	1	-	8.282172881897674	6.723028854328064	CCAATTAAAA
chr12	78584782	78584783	chr12:78584783:G:C	rs1717396	G	C	C	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr12	78646088	78646089	chr12:78646089:T:C	rs185478452	T	C	T	Hoxd9_MA0913.1	21	0	-	0	0	.
chr12	78793383	78793384	chr12:78793384:G:C	rs565694824	G	C	G	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr12	79135869	79135870	chr12:79135870:T:C	rs10506812	T	C	A	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr12	80329592	80329593	chr12:80329593:A:G	rs73135407	A	G	A	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr12	80369543	80369544	chr12:80369544:A:G	rs10778731	A	G	G	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr12	80444394	80444395	chr12:80444395:C:T	rs60216135	C	T	C	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr12	80473610	80473611	chr12:80473611:A:G	rs188450673	A	G	A	Hoxd9_MA0913.1	10	0	-	0	0	.
chr12	81015907	81015908	chr12:81015908:G:A	rs4842375	G	A	G	Hoxd9_MA0913.1	20	0	-	0	0	.
chr12	82635677	82635678	chr12:82635678:C:T	rs35833339	C	T	C	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr12	83324020	83324021	chr12:83324021:T:C	rs73145530	T	C	C	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr12	83828061	83828062	chr12:83828062:C:T	rs183015540	C	T	C	Hoxd9_MA0913.1	3	1	-	7.932552609785828	9.760171550280933	GCAGTTAAAA
chr12	84186445	84186446	chr12:84186446:C:T	rs12305026	C	T	C	Hoxd9_MA0913.1	12	0	+	0	0	.
chr12	84245436	84245437	chr12:84245437:A:C	rs12300675	A	C	A	Hoxd9_MA0913.1	27	0	-	0	0	.
chr12	84290198	84290199	chr12:84290199:T:C	rs986802	T	C	T	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr12	84314226	84314227	chr12:84314227:A:C	rs12307352	A	C	C	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr12	84314261	84314262	chr12:84314262:A:C	rs12307399	A	C	C	Hoxd9_MA0913.1	23	0	+	0	0	.
chr12	84599659	84599660	chr12:84599660:G:A	rs11116485	G	A	G	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr12	84637234	84637235	chr12:84637235:C:T	rs10779115	C	T	C	Hoxd9_MA0913.1	1	1	+	8.281840948251881	7.933705320522856	GCAATTAATA
chr12	84658663	84658664	chr12:84658664:C:A	rs7973896	C	A	C	Hoxd9_MA0913.1	2	1	+	8.246554688443613	9.168223885413955	GTCATTAAAT
chr12	84841997	84841998	chr12:84841998:T:C	rs6539865	T	C	T	Hoxd9_MA0913.1	4	1	+	8.853608248980283	5.561473997205303	ACAATAAAAA
chr12	85468697	85468698	chr12:85468698:C:T	rs190372247	C	T	C	Hoxd9_MA0913.1	9	1	-	8.293678209511443	9.760171550280933	GCAATTAAAG
chr12	85468719	85468720	chr12:85468720:A:G	rs75481195	A	G	A	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr12	85576702	85576703	chr12:85576703:G:A	rs10779170	G	A	g	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr12	85758816	85758817	chr12:85758817:C:T	rs10506923	C	T	C	Hoxd9_MA0913.1	28	0	-	0	0	.
chr12	85775158	85775159	chr12:85775159:A:C	rs61930632	A	C	C	Hoxd9_MA0913.1	9	1	-	8.60979621184233	7.387114908210791	ACAATAAAAT
chr12	85803391	85803392	chr12:85803392:C:T	rs59668915	C	T	T	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr12	85835784	85835785	chr12:85835785:A:G	rs4436622	A	G	A	Hoxd9_MA0913.1	22	0	-	0	0	.
chr12	85874704	85874705	chr12:85874705:C:T	rs11615953	C	T	C	Hoxd9_MA0913.1	26	0	+	0	0	.
chr12	86082219	86082220	chr12:86082220:A:C	rs11117184	A	C	a	Hoxd9_MA0913.1	6	1	+	7.75646393805828	3.281887075390074	GCCATTAAAC
chr12	86285381	86285382	chr12:86285382:T:C	rs2406122	T	C	T	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr12	86285400	86285401	chr12:86285401:A:C	rs77476184	A	C	A	Hoxd9_MA0913.1	6	1	+	9.453206344661718	4.978629481993513	GTAATAAAAA
chr12	86712292	86712293	chr12:86712293:A:C	rs992440315	A	C	A	Hoxd9_MA0913.1	28	0	+	0	0	.
chr12	86835733	86835734	chr12:86835734:C:T	rs10858498	C	T	C	Hoxd9_MA0913.1	27	0	-	0	0	.
chr12	86948952	86948953	chr12:86948953:T:A	rs66513214	T	A	A	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr12	87031047	87031048	chr12:87031048:T:C	rs1897634	T	C	C	Hoxd9_MA0913.1	19	0	-	0	0	.
chr12	87440637	87440638	chr12:87440638:G:A	rs75387437	G	A	G	Hoxd9_MA0913.1	0	1	+	9.801341972390743	8.853608248980283	GCAATAAAAA
chr12	87818741	87818742	chr12:87818742:C:T	rs2614137	C	T	T	Hoxd9_MA0913.1	27	0	+	0	0	.
chr12	87921106	87921107	chr12:87921107:A:G	rs1461292	A	G	A	Hoxd9_MA0913.1	22	0	+	0	0	.
chr12	88179763	88179764	chr12:88179764:C:T	rs12831250	C	T	T	Hoxd9_MA0913.1	0	1	-	8.246554688443613	7.298820965033153	GTCATTAAAT
chr12	88361799	88361800	chr12:88361800:G:T	rs10858715	G	T	T	Hoxd9_MA0913.1	10	0	-	0	0	.
chr12	88634134	88634135	chr12:88634135:T:C	rs571273433	T	C	T	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr12	88934738	88934739	chr12:88934739:G:A	rs112283612	G	A	G	Hoxd9_MA0913.1	9	1	-	8.678133135028622	9.51635951314298	GCAATTAAAC
chr12	89038841	89038842	chr12:89038842:T:G	rs150606791	T	G	T	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr12	89069536	89069537	chr12:89069537:T:C	rs10777150	T	C	T	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr12	89239954	89239955	chr12:89239955:T:C	rs11613480	T	C	T	Hoxd9_MA0913.1	5	1	-	8.853608248980283	2.631945096084414	ACAATAAAAA
chr12	89253986	89253987	chr12:89253987:A:G	rs11105221	A	G	A	Hoxd9_MA0913.1	3	1	+	7.4131794346509094	5.585560494155805	GCCATAAAAG
chr12	89278342	89278343	chr12:89278343:T:C	rs922350	T	C	C	Hoxd9_MA0913.1	18	0	+	0	0	.
chr12	89514702	89514703	chr12:89514703:C:T	rs10777180	C	T	C	Hoxd9_MA0913.1	23	0	-	0	0	.
chr12	89583164	89583165	chr12:89583165:G:A	rs76888433	G	A	G	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr12	89775630	89775631	chr12:89775631:T:C	rs10858928	T	C	T	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr12	89775647	89775648	chr12:89775648:G:T	rs142416476	G	T	G	Hoxd9_MA0913.1	11	0	+	0	0	.
chr12	90253457	90253458	chr12:90253458:G:T	rs11105551	G	T	G	Hoxd9_MA0913.1	28	0	-	0	0	.
chr12	90305901	90305902	chr12:90305902:G:A	rs74327048	G	A	G	Hoxd9_MA0913.1	19	0	-	0	0	.
chr12	90588998	90588999	chr12:90588999:C:A	rs79386346	C	A	C	Hoxd9_MA0913.1	21	0	-	0	0	.
chr12	90800951	90800952	chr12:90800952:G:A	rs17251078	G	A	G	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr12	90828908	90828909	chr12:90828909:C:T	rs75752417	C	T	C	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr12	90869114	90869115	chr12:90869115:T:C	rs7967392	T	C	T	Hoxd9_MA0913.1	7	1	-	7.801678332738202	0.9625338553838594	GCAATAAACA
chr12	91049813	91049814	chr12:91049814:T:C	rs118103358	T	C	T	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr12	91080122	91080123	chr12:91080123:A:C	rs17018691	A	C	A	Hoxd9_MA0913.1	3	1	+	8.838502353310592	4.372271682910535	GCCATTAAAA
chr12	91145897	91145898	chr12:91145898:G:A	rs7441	G	A	G	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr12	91204638	91204639	chr12:91204639:T:G	rs76025455	T	G	T	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr12	91274985	91274986	chr12:91274986:C:A	rs188330421	C	A	C	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr12	91395617	91395618	chr12:91395618:G:C	rs10859135	G	C	G	Hoxd9_MA0913.1	29	0	-	0	0	.
chr12	91523938	91523939	chr12:91523939:G:C	rs12814613	G	C	G	Hoxd9_MA0913.1	10	0	+	0	0	.
chr12	91878829	91878830	chr12:91878830:T:C	rs11106322	T	C	T	Hoxd9_MA0913.1	12	0	-	0	0	.
chr12	92032357	92032358	chr12:92032358:C:G	rs146399220	C	G	C	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr12	92335912	92335913	chr12:92335913:C:T	rs381966	C	T	T	Hoxd9_MA0913.1	9	1	+	7.75646393805828	8.594690316172638	GCCATTAAAC
chr12	92439829	92439830	chr12:92439830:A:G	rs11106552	A	G	A	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr12	92473552	92473553	chr12:92473553:T:C	rs11106569	T	C	T	Hoxd9_MA0913.1	15	0	+	0	0	.
chr12	92564825	92564826	chr12:92564826:T:C	rs73215511	T	C	T	Hoxd9_MA0913.1	5	1	+	8.812437826870472	5.418806477610913	ACAATTAAAA
chr12	92627897	92627898	chr12:92627898:A:T	rs41464449	A	T	A	Hoxd9_MA0913.1	8	1	+	8.490366725581566	7.012036123552516	GTCATTAAAA
chr12	92927860	92927861	chr12:92927861:G:C	rs12812223	G	C	G	Hoxd9_MA0913.1	19	0	+	0	0	.
chr12	92943423	92943424	chr12:92943424:T:G	rs4261325	T	G	T	Hoxd9_MA0913.1	4	1	+	8.371167929409406	5.079033677634427	GTAATAAAAC
chr12	92956014	92956015	chr12:92956015:A:G	rs117259854	A	G	A	Hoxd9_MA0913.1	5	1	-	8.329997507299597	4.936366158040037	GTAATTAAAC
chr12	93543603	93543604	chr12:93543604:A:G	rs112712191	A	G	A	Hoxd9_MA0913.1	10	0	+	0	0	.
chr12	93583688	93583689	chr12:93583689:T:A	rs3825198	T	A	A	Hoxd9_MA0913.1	8	1	-	8.371167929409406	6.892837327380355	GTAATAAAAC
chr12	93702996	93702997	chr12:93702997:T:C	rs17732886	T	C	T	Hoxd9_MA0913.1	14	0	-	0	0	.
chr12	93887326	93887327	chr12:93887327:G:C	rs2362429	G	C	c	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr12	93889195	93889196	chr12:93889196:T:C	rs733752	T	C	t	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr12	93965138	93965139	chr12:93965139:G:A	rs113944618	G	A	G	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr12	93965160	93965161	chr12:93965161:G:A	rs34808005	G	A	G	Hoxd9_MA0913.1	10	0	+	0	0	.
chr12	93969280	93969281	chr12:93969281:T:C	rs4761758	T	C	T	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr12	93991466	93991467	chr12:93991467:G:T	rs74695555	G	T	G	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr12	93991481	93991482	chr12:93991482:A:G	rs2971590	A	G	G	Hoxd9_MA0913.1	12	0	+	0	0	.
chr12	94083696	94083697	chr12:94083697:G:T	rs1469777	G	T	T	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr12	94127907	94127908	chr12:94127908:G:A	rs10777583	G	A	G	Hoxd9_MA0913.1	19	0	-	0	0	.
chr12	94290311	94290312	chr12:94290312:T:A	rs111913735	T	A	T	Hoxd9_MA0913.1	28	0	-	0	0	.
chr12	94297779	94297780	chr12:94297780:G:A	rs35129588	G	A	A	Hoxd9_MA0913.1	26	0	+	0	0	.
chr12	94406771	94406772	chr12:94406772:T:A	rs2365447	T	A	A	Hoxd9_MA0913.1	13	0	+	0	0	.
chr12	94498974	94498975	chr12:94498975:A:G	rs12814380	A	G	A	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr12	94697543	94697544	chr12:94697544:C:T	rs7312912	C	T	C	Hoxd9_MA0913.1	11	0	+	0	0	.
chr12	94708229	94708230	chr12:94708230:T:C	rs567126551	T	C	T	Hoxd9_MA0913.1	2	1	-	8.853608248980283	7.176149807522183	ACAATAAAAA
chr12	94761902	94761903	chr12:94761903:T:A	rs148564826	T	A	T	Hoxd9_MA0913.1	9	1	-	8.853608248980283	8.60979621184233	ACAATAAAAA
chr12	94761904	94761905	chr12:94761905:T:G	rs1836223	T	G	T	Hoxd9_MA0913.1	7	1	-	8.853608248980283	5.559761497261851	ACAATAAAAA
chr12	94761911	94761912	chr12:94761912:T:C	rs7294730	T	C	T	Hoxd9_MA0913.1	0	1	-	8.853608248980283	9.801341972390743	ACAATAAAAA
chr12	94769257	94769258	chr12:94769258:T:G	rs10777615	T	G	G	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr12	94955682	94955683	chr12:94955683:G:A	rs1834611	G	A	G	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr12	95181533	95181534	chr12:95181534:C:T	chr12:95181534:C:T	C	T	C	Hoxd9_MA0913.1	16	0	-	0	0	.
chr12	95212912	95212913	chr12:95212913:G:A	rs191358437	G	A	G	Hoxd9_MA0913.1	25	0	+	0	0	.
chr12	95243677	95243678	chr12:95243678:A:G	rs76201435	A	G	A	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr12	95473073	95473074	chr12:95473074:C:G	rs301007	C	G	G	Hoxd9_MA0913.1	0	1	-	9.453206344661718	7.97520767627846	GTAATAAAAA
chr12	95701627	95701628	chr12:95701628:T:C	rs76549212	T	C	T	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr12	95701887	95701888	chr12:95701888:C:A	rs2468360	C	A	A	Hoxd9_MA0913.1	12	0	-	0	0	.
chr12	95724506	95724507	chr12:95724507:G:A	rs4600288	G	A	G	Hoxd9_MA0913.1	12	0	+	0	0	.
chr12	95831255	95831256	chr12:95831256:T:C	rs73225784	T	C	T	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr12	96173466	96173467	chr12:96173467:G:A	rs118075820	G	A	G	Hoxd9_MA0913.1	24	0	-	0	0	.
chr12	96373308	96373309	chr12:96373309:C:T	rs73235115	C	T	C	Hoxd9_MA0913.1	13	0	+	0	0	.
chr12	96473392	96473393	chr12:96473393:A:C	rs10860042	A	C	A	Hoxd9_MA0913.1	7	1	+	8.334848631621252	5.04100187990282	GCAATAAAAG
chr12	96534963	96534964	chr12:96534964:G:A	rs183071169	G	A	G	Hoxd9_MA0913.1	14	0	-	0	0	.
chr12	97005249	97005250	chr12:97005250:G:A	rs78626884	G	A	G	Hoxd9_MA0913.1	24	0	+	0	0	.
chr12	97190416	97190417	chr12:97190417:A:T	rs12370259	A	T	A	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr12	97301177	97301178	chr12:97301178:C:G	rs12580462	C	G	C	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr12	98021172	98021173	chr12:98021173:T:C	rs117696029	T	C	T	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr12	98485721	98485722	chr12:98485722:C:G	rs829884	C	G	G	Hoxd9_MA0913.1	9	1	+	8.719303557138431	8.334848631621252	GCAATAAAAC
chr12	98587866	98587867	chr12:98587867:A:C	rs36031841	A	C	c	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr12	99260261	99260262	chr12:99260262:T:C	rs12319237	T	C	T	Hoxd9_MA0913.1	28	0	-	0	0	.
chr12	99732458	99732459	chr12:99732459:C:T	rs1604175	C	T	T	Hoxd9_MA0913.1	22	0	+	0	0	.
chr12	99752889	99752890	chr12:99752890:G:T	rs6538936	G	T	T	Hoxd9_MA0913.1	22	0	+	0	0	.
chr12	99915599	99915600	chr12:99915600:A:C	rs61193188	A	C	A	Hoxd9_MA0913.1	8	1	+	7.3720090125411	5.372345372888559	GCCATTAAAG
chr12	100391959	100391960	chr12:100391960:G:A	rs76282641	G	A	G	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr12	100706099	100706100	chr12:100706100:T:C	rs10778065	T	C	C	Hoxd9_MA0913.1	22	0	+	0	0	.
chr12	101041182	101041183	chr12:101041183:A:G	rs7957254	A	G	A	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr12	101414516	101414517	chr12:101414517:A:C	rs17031408	A	C	A	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr12	101620829	101620830	chr12:101620830:G:A	rs75939109	G	A	G	Hoxd9_MA0913.1	25	0	-	0	0	.
chr12	101686141	101686142	chr12:101686142:C:T	rs2241555	C	T	T	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr12	101686143	101686144	chr12:101686144:T:C	rs2241554	T	C	T	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr12	101839800	101839801	chr12:101839801:G:A	rs12579355	G	A	G	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr12	101866695	101866696	chr12:101866696:A:T	rs34936385	A	T	A	Hoxd9_MA0913.1	20	0	+	0	0	.
chr12	101917990	101917991	chr12:101917991:C:A	rs148148877	C	A	C	Hoxd9_MA0913.1	12	0	+	0	0	.
chr12	101996095	101996096	chr12:101996096:A:C	rs180988730	A	C	A	Hoxd9_MA0913.1	23	0	-	0	0	.
chr12	102483307	102483308	chr12:102483308:C:G	rs12579077	C	G	C	Hoxd9_MA0913.1	22	0	-	0	0	.
chr12	102564040	102564041	chr12:102564041:A:C	rs855206	A	C	C	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr12	103094881	103094882	chr12:103094882:T:C	rs4144504	T	C	T	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr12	103783994	103783995	chr12:103783995:C:T	rs116516318	C	T	T	Hoxd9_MA0913.1	19	0	-	0	0	.
chr12	103904897	103904898	chr12:103904898:C:T	rs2583278	C	T	C	Hoxd9_MA0913.1	29	0	-	0	0	.
chr12	103936736	103936737	chr12:103936737:T:C	rs10861147	T	C	T	Hoxd9_MA0913.1	10	0	-	0	0	.
chr12	103936751	103936752	chr12:103936752:T:C	rs4964375	T	C	T	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr12	103975508	103975509	chr12:103975509:T:C	rs4135082	T	C	T	Hoxd9_MA0913.1	9	1	+	8.287725110553424	7.449498732439066	GTCATAAAAT
chr12	104535399	104535400	chr12:104535400:C:G	rs1704926	C	G	C	Hoxd9_MA0913.1	3	1	-	7.932552609785828	5.293940879880877	GCAGTTAAAA
chr12	104618855	104618856	chr12:104618856:G:A	rs11613724	G	A	G	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr12	104685107	104685108	chr12:104685108:A:G	rs771544116	A	G	A	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr12	104700240	104700241	chr12:104700241:C:T	rs312140	C	T	C	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr12	104750084	104750085	chr12:104750085:G:A	rs75020561	G	A	A	Hoxd9_MA0913.1	20	0	-	0	0	.
chr12	104751393	104751394	chr12:104751394:G:T	rs2468109	G	T	g	Hoxd9_MA0913.1	15	0	-	0	0	.
chr12	104886909	104886910	chr12:104886910:C:T	rs4375513	C	T	T	Hoxd9_MA0913.1	0	1	-	9.209394307523764	8.261660584113304	GTAATAAAAT
chr12	104957485	104957486	chr12:104957486:A:G	rs576091141	A	G	A	Hoxd9_MA0913.1	19	0	-	0	0	.
chr12	104994402	104994403	chr12:104994403:C:A	rs11112287	C	A	A	Hoxd9_MA0913.1	21	0	-	0	0	.
chr12	105018916	105018917	chr12:105018917:C:T	rs7958263	C	T	C	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr12	105064478	105064479	chr12:105064479:G:A	rs17242777	G	A	G	Hoxd9_MA0913.1	20	0	-	0	0	.
chr12	105309881	105309882	chr12:105309882:T:C	rs56032632	T	C	T	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr12	105445706	105445707	chr12:105445707:A:G	rs147688405	A	G	A	Hoxd9_MA0913.1	14	0	-	0	0	.
chr12	105705738	105705739	chr12:105705739:C:T	rs55844653	C	T	C	Hoxd9_MA0913.1	29	0	+	0	0	.
chr12	106062087	106062088	chr12:106062088:A:G	rs35063792	A	G	A	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr12	106086671	106086672	chr12:106086672:A:G	rs2251027	A	G	A	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr12	106256572	106256573	chr12:106256573:A:G	rs2936702	A	G	A	Hoxd9_MA0913.1	14	0	-	0	0	.
chr12	107546136	107546137	chr12:107546137:G:T	rs150972954	G	T	G	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr12	107568126	107568127	chr12:107568127:G:A	rs7963848	G	A	G	Hoxd9_MA0913.1	25	0	+	0	0	.
chr12	107610043	107610044	chr12:107610044:C:T	rs760415369	C	T	C	Hoxd9_MA0913.1	21	0	-	0	0	.
chr12	107738653	107738654	chr12:107738654:A:T	rs12227593	A	T	T	Hoxd9_MA0913.1	9	1	+	8.32301137036169	8.079199333223738	GCAATAAATA
chr12	108270396	108270397	chr12:108270397:A:G	rs1426348	A	G	G	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr12	108272114	108272115	chr12:108272115:G:A	rs151328906	G	A	g	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr12	108328650	108328651	chr12:108328651:G:T	rs7297342	G	T	G	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr12	108442711	108442712	chr12:108442712:A:C	rs57181439	A	C	A	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr12	108552449	108552450	chr12:108552450:T:C	rs60616769	T	C	T	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr12	108558294	108558295	chr12:108558295:A:C	rs12299269	A	C	A	Hoxd9_MA0913.1	26	0	+	0	0	.
chr12	108561788	108561789	chr12:108561789:G:A	rs73404713	G	A	G	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr12	108567129	108567130	chr12:108567130:G:T	rs10861945	G	T	T	Hoxd9_MA0913.1	0	1	-	8.323343304007485	8.853608248980283	CCAATAAAAA
chr12	108576685	108576686	chr12:108576686:C:T	rs11113995	C	T	c	Hoxd9_MA0913.1	19	0	+	0	0	.
chr12	108629865	108629866	chr12:108629866:T:G	rs542107317	T	G	T	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr12	108727918	108727919	chr12:108727919:G:A	rs11114039	G	A	G	Hoxd9_MA0913.1	28	0	+	0	0	.
chr12	109256960	109256961	chr12:109256961:T:C	rs73190609	T	C	T	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr12	109386188	109386189	chr12:109386189:G:C	rs76682741	G	C	G	Hoxd9_MA0913.1	18	0	-	0	0	.
chr12	109573562	109573563	chr12:109573563:A:G	rs560451620	A	G	A	Hoxd9_MA0913.1	25	0	-	0	0	.
chr12	109614179	109614180	chr12:109614180:T:C	rs17670859	T	C	T	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr12	109838273	109838274	chr12:109838274:A:T	rs7139451	A	T	T	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr12	109863795	109863796	chr12:109863796:T:G	rs1048758363	T	G	T	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr12	109888647	109888648	chr12:109888648:G:A	rs2111540	G	A	G	Hoxd9_MA0913.1	15	0	-	0	0	.
chr12	110314555	110314556	chr12:110314556:G:A	rs1266763883	G	A	G	Hoxd9_MA0913.1	28	0	+	0	0	.
chr12	110598562	110598563	chr12:110598563:A:T	rs186314670	A	T	T	Hoxd9_MA0913.1	4	1	-	8.853608248980283	6.166356824794127	ACAATAAAAA
chr12	111052848	111052849	chr12:111052849:A:G	rs76643428	A	G	A	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr12	111451804	111451805	chr12:111451805:T:C	rs186769121	T	C	T	Hoxd9_MA0913.1	25	0	-	0	0	.
chr12	111451849	111451850	chr12:111451850:C:T	rs1235990618	C	T	C	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr12	111841471	111841472	chr12:111841472:T:C	rs147792675	T	C	T	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr12	112219556	112219557	chr12:112219557:T:C	rs112725417	T	C	T	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr12	112530801	112530802	chr12:112530802:G:T	rs757268	G	T	g	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr12	112607872	112607873	chr12:112607873:G:A	rs79790736	G	A	G	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr12	112887654	112887655	chr12:112887655:T:C	rs7979186	T	C	C	Hoxd9_MA0913.1	29	0	+	0	0	.
chr12	112895434	112895435	chr12:112895435:A:G	rs10774668	A	G	A	Hoxd9_MA0913.1	10	0	+	0	0	.
chr12	112926526	112926527	chr12:112926527:A:G	rs4766666	A	G	G	Hoxd9_MA0913.1	3	1	+	7.7976343601680895	5.970015419672985	GCCATAAAAC
chr12	112932621	112932622	chr12:112932622:A:C	rs1154970	A	C	A	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr12	113233064	113233065	chr12:113233065:G:A	rs114154884	G	A	G	Hoxd9_MA0913.1	13	0	+	0	0	.
chr12	113233066	113233067	chr12:113233067:A:C	rs188603236	A	C	A	Hoxd9_MA0913.1	15	0	+	0	0	.
chr12	113835408	113835409	chr12:113835409:G:A	rs75477778	G	A	G	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr12	114187173	114187174	chr12:114187174:G:A	rs78483417	G	A	G	Hoxd9_MA0913.1	21	0	-	0	0	.
chr12	114694241	114694242	chr12:114694242:A:G	rs10735084	A	G	A	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr12	114913867	114913868	chr12:114913868:T:C	rs12581666	T	C	T	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr12	115156060	115156061	chr12:115156061:T:C	rs10454501	T	C	T	Hoxd9_MA0913.1	3	1	-	8.323343304007485	6.495724363512382	CCAATAAAAA
chr12	115274247	115274248	chr12:115274248:A:G	rs12230642	A	G	a	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr12	115420047	115420048	chr12:115420048:T:C	rs35893022	T	C	T	Hoxd9_MA0913.1	15	0	-	0	0	.
chr12	115474884	115474885	chr12:115474885:C:T	rs116058080	C	T	C	Hoxd9_MA0913.1	9	1	-	8.293678209511443	9.760171550280933	GCAATTAAAG
chr12	115577339	115577340	chr12:115577340:C:T	rs7962526	C	T	T	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr12	115632299	115632300	chr12:115632300:C:T	rs1965295	C	T	T	Hoxd9_MA0913.1	23	0	-	0	0	.
chr12	115632317	115632318	chr12:115632318:T:C	rs73210766	T	C	T	Hoxd9_MA0913.1	5	1	-	8.323343304007485	2.101680151111617	CCAATAAAAA
chr12	115661305	115661306	chr12:115661306:G:C	rs185105975	G	C	G	Hoxd9_MA0913.1	10	0	+	0	0	.
chr12	115694206	115694207	chr12:115694207:T:G	rs7300795	T	G	G	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr12	115822998	115822999	chr12:115822999:A:G	rs80338611	A	G	A	Hoxd9_MA0913.1	11	0	+	0	0	.
chr12	115844800	115844801	chr12:115844801:C:T	rs74238456	C	T	C	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr12	116196364	116196365	chr12:116196365:G:C	rs4767387	G	C	A	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr12	116322212	116322213	chr12:116322213:A:T	rs2048711	A	T	T	Hoxd9_MA0913.1	10	0	-	0	0	.
chr12	116406694	116406695	chr12:116406695:G:A	rs191523733	G	A	G	Hoxd9_MA0913.1	19	0	+	0	0	.
chr12	116484952	116484953	chr12:116484953:A:G	rs1007791	A	G	G	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr12	116599290	116599291	chr12:116599291:T:G	chr12:116599291:T:G	T	G	T	Hoxd9_MA0913.1	25	0	-	0	0	.
chr12	116719255	116719256	chr12:116719256:C:T	rs977927710	C	T	C	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr12	116802210	116802211	chr12:116802211:A:G	rs74680129	A	G	A	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr12	117031808	117031809	chr12:117031809:A:G	rs72487544	A	G	A	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr12	117409134	117409135	chr12:117409135:G:T	rs10774914	G	T	C	Hoxd9_MA0913.1	23	0	-	0	0	.
chr12	117451407	117451408	chr12:117451408:C:T	rs4767545	C	T	C	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr12	117582046	117582047	chr12:117582047:T:C	rs35920368	T	C	T	Hoxd9_MA0913.1	23	0	-	0	0	.
chr12	117738047	117738048	chr12:117738048:G:T	rs665540	G	T	G	Hoxd9_MA0913.1	0	1	+	7.932552609785828	4.8954099138329585	GCAGTTAAAA
chr12	117738069	117738070	chr12:117738070:T:C	rs477022	T	C	T	Hoxd9_MA0913.1	22	0	+	0	0	.
chr12	117980918	117980919	chr12:117980919:G:A	rs147143968	G	A	G	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr12	118132501	118132502	chr12:118132502:G:T	rs7956285	G	T	G	Hoxd9_MA0913.1	29	0	+	0	0	.
chr12	118271506	118271507	chr12:118271507:G:A	rs112725005	G	A	G	Hoxd9_MA0913.1	16	0	-	0	0	.
chr12	118378270	118378271	chr12:118378271:T:C	rs146730986	T	C	T	Hoxd9_MA0913.1	23	0	-	0	0	.
chr12	118385428	118385429	chr12:118385429:T:C	rs2062525	T	C	T	Hoxd9_MA0913.1	13	0	-	0	0	.
chr12	118553514	118553515	chr12:118553515:A:G	rs77915398	A	G	A	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr12	119003406	119003407	chr12:119003407:C:T	rs2393465	C	T	T	Hoxd9_MA0913.1	2	1	+	7.4131794346509094	1.8845045997704688	GCCATAAAAG
chr12	119209577	119209578	chr12:119209578:T:A	rs2727723	T	A	t	Hoxd9_MA0913.1	14	0	-	0	0	.
chr12	119229889	119229890	chr12:119229890:A:G	rs117134297	A	G	A	Hoxd9_MA0913.1	3	1	+	8.853608248980283	7.025989308485178	ACAATAAAAA
chr12	119293051	119293052	chr12:119293052:G:A	rs2727690	G	A	A	Hoxd9_MA0913.1	28	0	-	0	0	.
chr12	119387098	119387099	chr12:119387099:C:G	rs142548905	C	G	C	Hoxd9_MA0913.1	20	0	+	0	0	.
chr12	119501619	119501620	chr12:119501620:C:A	rs1716441	C	A	A	Hoxd9_MA0913.1	19	0	-	0	0	.
chr12	119828325	119828326	chr12:119828326:A:G	rs280582	A	G	G	Hoxd9_MA0913.1	11	0	-	0	0	.
chr12	120188589	120188590	chr12:120188590:C:T	rs11065040	C	T	C	Hoxd9_MA0913.1	29	0	+	0	0	.
chr12	120268024	120268025	chr12:120268025:A:C	rs3956833	A	C	A	Hoxd9_MA0913.1	2	1	+	8.678133135028622	7.75646393805828	GCAATTAAAC
chr12	120496771	120496772	chr12:120496772:T:C	rs1268652505	T	C	T	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr12	120498053	120498054	chr12:120498054:T:G	rs188270446	T	G	T	Hoxd9_MA0913.1	20	0	+	0	0	.
chr12	120600476	120600477	chr12:120600477:A:C	rs10774561	A	C	A	Hoxd9_MA0913.1	4	1	-	9.412035922551908	6.119901670776928	GTAATTAAAA
chr12	120756823	120756824	chr12:120756824:T:C	rs11065253	T	C	T	Hoxd9_MA0913.1	7	1	-	8.879672775420401	2.040528298066059	GCCATAAAAA
chr12	120844855	120844856	chr12:120844856:C:T	rs661647	C	T	T	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr12	121215574	121215575	chr12:121215575:C:A	rs78000028	C	A	C	Hoxd9_MA0913.1	15	0	-	0	0	.
chr12	121218166	121218167	chr12:121218167:A:T	rs1182945	A	T	A	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr12	121321268	121321269	chr12:121321269:T:A	rs192602215	T	A	T	Hoxd9_MA0913.1	6	1	-	9.412035922551908	6.988715975017923	GTAATTAAAA
chr12	121351756	121351757	chr12:121351757:C:A	rs1622534	C	A	C	Hoxd9_MA0913.1	11	0	-	0	0	.
chr12	121438453	121438454	chr12:121438454:G:T	rs10444489	G	T	T	Hoxd9_MA0913.1	0	1	+	9.209394307523764	6.1722516115708945	GTAATAAAAT
chr12	121524787	121524788	chr12:121524788:G:A	rs564939647	G	A	G	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr12	121620371	121620372	chr12:121620372:A:G	rs61648968	A	G	A	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr12	121686788	121686789	chr12:121686789:A:C	rs7974950	A	C	a	Hoxd9_MA0913.1	11	0	+	0	0	.
chr12	121686803	121686804	chr12:121686804:A:T	rs892555780	A	T	a	Hoxd9_MA0913.1	26	0	+	0	0	.
chr12	122069600	122069601	chr12:122069601:T:C	rs61952904	T	C	-	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr12	122267434	122267435	chr12:122267435:T:C	rs57742919	T	C	T	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr12	122468375	122468376	chr12:122468376:A:T	rs11609474	A	T	.	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr12	122652019	122652020	chr12:122652020:G:A	rs74937887	G	A	G	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr12	123030814	123030815	chr12:123030815:G:A	rs73411057	G	A	G	Hoxd9_MA0913.1	10	0	+	0	0	.
chr12	123409362	123409363	chr12:123409363:T:C	rs28642812	T	C	T	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr12	123428885	123428886	chr12:123428886:A:G	rs4930718	A	G	A	Hoxd9_MA0913.1	15	0	-	0	0	.
chr12	123687355	123687356	chr12:123687356:A:G	rs6488893	A	G	A	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr12	124046846	124046847	chr12:124046847:G:T	rs34351193	G	T	G	Hoxd9_MA0913.1	11	0	+	0	0	.
chr12	124194867	124194868	chr12:124194868:C:G	rs11057501	C	G	C	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr12	124260076	124260077	chr12:124260077:T:G	rs7966873	T	G	G	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr12	124260079	124260080	chr12:124260080:A:G	rs78626151	A	G	A	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr12	124656018	124656019	chr12:124656019:C:A	rs185653593	C	A	C	Hoxd9_MA0913.1	15	0	-	0	0	.
chr12	124659003	124659004	chr12:124659004:C:T	rs71458863	C	T	C	Hoxd9_MA0913.1	1	1	+	8.282172881897674	7.934037254168651	CCAATTAAAA
chr12	124683208	124683209	chr12:124683209:C:T	rs7965734	C	T	C	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr12	124756306	124756307	chr12:124756307:G:A	rs2085438	G	A	A	Hoxd9_MA0913.1	18	0	-	0	0	.
chr12	124756327	124756328	chr12:124756328:A:G	rs140135592	A	G	A	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr12	124842987	124842988	chr12:124842988:G:T	chr12:124842988:G:T	G	T	G	Hoxd9_MA0913.1	16	0	-	0	0	.
chr12	124884278	124884279	chr12:124884279:A:C	rs60832006	A	C	C	Hoxd9_MA0913.1	25	0	+	0	0	.
chr12	124898493	124898494	chr12:124898494:T:C	rs7308593	T	C	T	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr12	125180559	125180560	chr12:125180560:A:G	rs28646229	A	G	A	Hoxd9_MA0913.1	2	1	+	7.973723031895638	6.29626459043754	GCAGTAAAAA
chr12	125290927	125290928	chr12:125290928:T:C	rs4765036	T	C	T	Hoxd9_MA0913.1	17	0	-	0	0	.
chr12	125486820	125486821	chr12:125486821:G:A	rs4765043	G	A	A	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr12	125985203	125985204	chr12:125985204:A:G	rs4765311	A	G	G	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr12	126524100	126524101	chr12:126524101:T:C	rs78150825	T	C	T	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr12	126652314	126652315	chr12:126652315:G:C	rs117765674	G	C	G	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr12	127053060	127053061	chr12:127053061:C:T	rs146698918	C	T	C	Hoxd9_MA0913.1	11	0	-	0	0	.
chr12	127166501	127166502	chr12:127166502:G:A	rs562024104	G	A	G	Hoxd9_MA0913.1	0	1	+	9.760171550280933	8.812437826870472	GCAATTAAAA
chr12	127284654	127284655	chr12:127284655:T:C	rs73232690	T	C	T	Hoxd9_MA0913.1	26	0	-	0	0	.
chr12	127289793	127289794	chr12:127289794:T:C	rs10744302	T	C	C	Hoxd9_MA0913.1	18	0	+	0	0	.
chr12	127366663	127366664	chr12:127366664:A:C	rs1385995	A	C	A	Hoxd9_MA0913.1	4	1	-	7.4131794346509094	4.12104518287593	GCCATAAAAG
chr12	127680778	127680779	chr12:127680779:C:G	rs28608694	C	G	G	Hoxd9_MA0913.1	0	1	-	8.879672775420401	7.4016741070371435	GCCATAAAAA
chr12	127748329	127748330	chr12:127748330:T:C	rs11059338	T	C	T	Hoxd9_MA0913.1	6	1	-	7.801678332738202	0.9862576649588617	GCAATAAACA
chr12	127941817	127941818	chr12:127941818:T:C	rs1386848	T	C	T	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr12	128032338	128032339	chr12:128032339:G:A	rs4761056	G	A	A	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr12	128076590	128076591	chr12:128076591:T:C	rs10773480	T	C	C	Hoxd9_MA0913.1	18	0	-	0	0	.
chr12	128245525	128245526	chr12:128245526:C:T	rs4533103	C	T	T	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr12	128582246	128582247	chr12:128582247:A:G	rs1489418	A	G	A	Hoxd9_MA0913.1	20	0	+	0	0	.
chr12	128719237	128719238	chr12:128719238:T:C	rs56900718	T	C	C	Hoxd9_MA0913.1	3	1	-	8.879672775420401	7.052053834925298	GCCATAAAAA
chr12	129551400	129551401	chr12:129551401:G:C	rs7309565	G	C	G	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr12	129862801	129862802	chr12:129862802:C:T	rs35831266	C	T	C	Hoxd9_MA0913.1	17	0	+	0	0	.
chr12	129906299	129906300	chr12:129906300:G:A	rs12581136	G	A	G	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr12	129999117	129999118	chr12:129999118:T:C	rs2398495	T	C	C	Hoxd9_MA0913.1	11	0	-	0	0	.
chr12	130079478	130079479	chr12:130079479:A:G	rs11060682	A	G	A	Hoxd9_MA0913.1	23	0	-	0	0	.
chr12	130240886	130240887	chr12:130240887:T:C	rs12308714	T	C	T	Hoxd9_MA0913.1	29	0	+	0	0	.
chr12	130335727	130335728	chr12:130335728:T:G	chr12:130335728:T:G	T	G	t	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr12	130606378	130606379	chr12:130606379:T:C	rs11061026	T	C	C	Hoxd9_MA0913.1	18	0	+	0	0	.
chr12	130692399	130692400	chr12:130692400:A:G	rs729362	A	G	A	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr12	130714075	130714076	chr12:130714076:G:C	rs565209057	G	C	G	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr12	130741596	130741597	chr12:130741597:A:G	rs10848195	A	G	A	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr12	130812692	130812693	chr12:130812693:A:G	rs4759793	A	G	A	Hoxd9_MA0913.1	20	0	+	0	0	.
chr12	130952411	130952412	chr12:130952412:T:C	rs10848259	T	C	T	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr12	130989162	130989163	chr12:130989163:G:T	rs35709469	G	T	T	Hoxd9_MA0913.1	23	0	-	0	0	.
chr12	130989168	130989169	chr12:130989169:T:C	rs36077382	T	C	T	Hoxd9_MA0913.1	17	0	-	0	0	.
chr12	131116347	131116348	chr12:131116348:C:T	rs1195929	C	T	C	Hoxd9_MA0913.1	11	0	-	0	0	.
chr12	131197995	131197996	chr12:131197996:A:C	rs12296195	A	C	A	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr12	131265751	131265752	chr12:131265752:G:A	rs150588670	G	A	G	Hoxd9_MA0913.1	25	0	-	0	0	.
chr12	131265783	131265784	chr12:131265784:C:G	rs61938691	C	G	c	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr12	131380225	131380226	chr12:131380226:T:C	rs3935107	T	C	T	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr12	131400584	131400585	chr12:131400585:G:A	rs71468487	G	A	g	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr12	131409259	131409260	chr12:131409260:A:G	rs11061514	A	G	A	Hoxd9_MA0913.1	10	0	+	0	0	.
chr12	131458666	131458667	chr12:131458667:C:T	rs11061546	C	T	c	Hoxd9_MA0913.1	29	0	+	0	0	.
chr12	131515051	131515052	chr12:131515052:T:C	rs11061587	T	C	T	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr12	131515075	131515076	chr12:131515076:T:G	rs11061588	T	G	C	Hoxd9_MA0913.1	12	0	+	0	0	.
chr12	131515089	131515090	chr12:131515090:T:C	rs2398557	T	C	T	Hoxd9_MA0913.1	26	0	+	0	0	.
chr12	131575829	131575830	chr12:131575830:G:A	rs12810264	G	A	G	Hoxd9_MA0913.1	16	0	+	0	0	.
chr12	131640438	131640439	chr12:131640439:T:A	rs11247049	T	A	T	Hoxd9_MA0913.1	0	1	-	8.812437826870472	6.723028854328064	ACAATTAAAA
chr12	131740437	131740438	chr12:131740438:T:G	rs59383017	T	G	T	Hoxd9_MA0913.1	11	0	-	0	0	.
chr12	131948729	131948730	chr12:131948730:C:T	rs117056855	C	T	C	Hoxd9_MA0913.1	20	0	-	0	0	.
chr12	131948733	131948734	chr12:131948734:C:A	rs73162972	C	A	C	Hoxd9_MA0913.1	16	0	-	0	0	.
chr12	132180692	132180693	chr12:132180693:G:A	rs11246970	G	A	G	Hoxd9_MA0913.1	25	0	+	0	0	.
chr12	133115742	133115743	chr12:133115743:T:C	rs12422899	T	C	C	Hoxd9_MA0913.1	23	0	+	0	0	.
chr13	19083632	19083633	chr13:19083633:A:C	rs80036979	A	C	A	Hoxd9_MA0913.1	10	0	+	0	0	.
chr13	19371577	19371578	chr13:19371578:T:C	rs945611	T	C	t	Hoxd9_MA0913.1	24	0	-	0	0	.
chr13	19768360	19768361	chr13:19768361:G:A	rs75481727	G	A	G	Hoxd9_MA0913.1	17	0	+	0	0	.
chr13	20370203	20370204	chr13:20370204:A:C	rs4770014	A	C	A	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr13	20493801	20493802	chr13:20493802:G:A	rs9552210	G	A	G	Hoxd9_MA0913.1	14	0	+	0	0	.
chr13	21134220	21134221	chr13:21134221:C:A	chr13:21134221:C:A	C	A	C	Hoxd9_MA0913.1	27	0	-	0	0	.
chr13	21134244	21134245	chr13:21134245:T:C	rs61454682	T	C	T	Hoxd9_MA0913.1	3	1	-	8.879672775420401	7.052053834925298	GCCATAAAAA
chr13	21663469	21663470	chr13:21663470:T:C	rs151283316	T	C	T	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr13	21950019	21950020	chr13:21950020:G:A	rs2320604	G	A	G	Hoxd9_MA0913.1	20	0	+	0	0	.
chr13	21950023	21950024	chr13:21950024:C:A	rs3129660	C	A	A	Hoxd9_MA0913.1	24	0	+	0	0	.
chr13	21980737	21980738	chr13:21980738:G:A	rs9506766	G	A	A	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr13	22195399	22195400	chr13:22195400:G:A	rs17326684	G	A	G	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr13	22596296	22596297	chr13:22596297:A:C	rs1360294552	A	C	A	Hoxd9_MA0913.1	28	0	-	0	0	.
chr13	22891982	22891983	chr13:22891983:A:C	rs7318592	A	C	C	Hoxd9_MA0913.1	5	1	-	8.594690316172638	2.41419758538658	GCCATTAAAT
chr13	22923363	22923364	chr13:22923364:G:C	rs112664049	G	C	G	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr13	22923387	22923388	chr13:22923388:G:A	rs111783560	G	A	G	Hoxd9_MA0913.1	21	0	+	0	0	.
chr13	23087136	23087137	chr13:23087137:A:G	rs4770386	A	G	G	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr13	23274716	23274717	chr13:23274717:C:T	rs9552906	C	T	C	Hoxd9_MA0913.1	23	0	-	0	0	.
chr13	23510669	23510670	chr13:23510670:T:C	rs6490805	T	C	T	Hoxd9_MA0913.1	27	0	+	0	0	.
chr13	23570138	23570139	chr13:23570139:T:A	rs9510777	T	A	T	Hoxd9_MA0913.1	14	0	+	0	0	.
chr13	23578446	23578447	chr13:23578447:C:G	rs75670596	C	G	C	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr13	23623202	23623203	chr13:23623203:A:G	rs146077085	A	G	A	Hoxd9_MA0913.1	19	0	-	0	0	.
chr13	23908793	23908794	chr13:23908794:A:G	rs7333092	A	G	G	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr13	23963861	23963862	chr13:23963862:A:G	rs7330124	A	G	A	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr13	24005205	24005206	chr13:24005206:G:T	rs60474013	G	T	G	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr13	24036173	24036174	chr13:24036174:T:C	rs56331495	T	C	T	Hoxd9_MA0913.1	16	0	+	0	0	.
chr13	24110180	24110181	chr13:24110181:A:G	rs17080058	A	G	A	Hoxd9_MA0913.1	9	1	+	7.973723031895638	6.507229691126146	GCAGTAAAAA
chr13	24177865	24177866	chr13:24177866:A:T	rs9511111	A	T	A	Hoxd9_MA0913.1	16	0	-	0	0	.
chr13	24460245	24460246	chr13:24460246:C:T	rs750771	C	T	.	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr13	25118502	25118503	chr13:25118503:T:C	rs56387693	T	C	C	Hoxd9_MA0913.1	14	0	+	0	0	.
chr13	25249068	25249069	chr13:25249069:T:A	rs7999040	T	A	T	Hoxd9_MA0913.1	14	0	+	0	0	.
chr13	25731463	25731464	chr13:25731464:C:T	rs9511901	C	T	C	Hoxd9_MA0913.1	16	0	+	0	0	.
chr13	25771937	25771938	chr13:25771938:T:G	rs9511921	T	G	T	Hoxd9_MA0913.1	16	0	-	0	0	.
chr13	25807040	25807041	chr13:25807041:A:G	rs12859952	A	G	G	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr13	25989295	25989296	chr13:25989296:A:C	rs141276447	A	C	A	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr13	26018535	26018536	chr13:26018536:G:A	rs9581506	G	A	G	Hoxd9_MA0913.1	17	0	-	0	0	.
chr13	26026549	26026550	chr13:26026550:C:T	rs9512034	C	T	C	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr13	26183673	26183674	chr13:26183674:A:G	rs9512143	A	G	a	Hoxd9_MA0913.1	9	1	+	7.973723031895638	6.507229691126146	GCAGTAAAAA
chr13	26221325	26221326	chr13:26221326:C:A	rs11558132	C	A	c	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr13	26799016	26799017	chr13:26799017:G:A	rs7332384	G	A	G	Hoxd9_MA0913.1	0	1	+	7.973723031895638	7.025989308485178	GCAGTAAAAA
chr13	26983221	26983222	chr13:26983222:C:T	rs79875392	C	T	C	Hoxd9_MA0913.1	13	0	+	0	0	.
chr13	27036983	27036984	chr13:27036984:A:G	rs114556131	A	G	A	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr13	27295140	27295141	chr13:27295141:C:T	rs9553986	C	T	C	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr13	28009443	28009444	chr13:28009444:A:G	rs2481955	A	G	A	Hoxd9_MA0913.1	16	0	-	0	0	.
chr13	28468314	28468315	chr13:28468315:C:T	rs141487454	C	T	C	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr13	28506508	28506509	chr13:28506509:A:G	rs9551479	A	G	A	Hoxd9_MA0913.1	19	0	+	0	0	.
chr13	28545759	28545760	chr13:28545760:C:T	rs4769607	C	T	T	Hoxd9_MA0913.1	0	1	-	8.371167929409406	7.423434205998946	GTAATAAAAC
chr13	29134031	29134032	chr13:29134032:A:G	rs9506111	A	G	A	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr13	29300554	29300555	chr13:29300555:A:G	rs962094	A	G	A	Hoxd9_MA0913.1	25	0	-	0	0	.
chr13	29376810	29376811	chr13:29376811:A:C	rs3121746	A	C	C	Hoxd9_MA0913.1	13	0	+	0	0	.
chr13	29763596	29763597	chr13:29763597:C:T	rs371004786	C	T	C	Hoxd9_MA0913.1	14	0	-	0	0	.
chr13	29813021	29813022	chr13:29813022:A:G	rs17073919	A	G	A	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr13	29884599	29884600	chr13:29884600:G:T	rs9314986	G	T	T	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr13	30033747	30033748	chr13:30033748:G:T	rs114854663	G	T	G	Hoxd9_MA0913.1	25	0	+	0	0	.
chr13	30453914	30453915	chr13:30453915:A:C	rs67455627	A	C	A	Hoxd9_MA0913.1	8	1	+	8.287725110553424	6.2880614709008835	GTCATAAAAT
chr13	30466344	30466345	chr13:30466345:A:G	rs77376623	A	G	A	Hoxd9_MA0913.1	20	0	-	0	0	.
chr13	30466382	30466383	chr13:30466383:G:A	rs527243638	G	A	G	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr13	30479905	30479906	chr13:30479906:A:G	rs78856638	A	G	A	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr13	31101701	31101702	chr13:31101702:A:G	rs17620507	A	G	G	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr13	31117506	31117507	chr13:31117507:T:A	rs17075455	T	A	A	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr13	31159057	31159058	chr13:31159058:G:A	rs7988806	G	A	G	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr13	31254229	31254230	chr13:31254230:G:A	rs2313817	G	A	A	Hoxd9_MA0913.1	10	0	+	0	0	.
chr13	31468408	31468409	chr13:31468409:C:T	rs112274482	C	T	c	Hoxd9_MA0913.1	22	0	-	0	0	.
chr13	31468433	31468434	chr13:31468434:A:G	rs61953919	A	G	A	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr13	31486129	31486130	chr13:31486130:C:G	rs17076175	C	G	C	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr13	31605725	31605726	chr13:31605726:A:G	rs9532219	A	G	A	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr13	31639924	31639925	chr13:31639925:G:A	rs148550778	G	A	g	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr13	31953391	31953392	chr13:31953392:A:G	rs916756	A	G	G	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr13	31953402	31953403	chr13:31953403:A:C	rs203419	A	C	C	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr13	31970665	31970666	chr13:31970666:A:G	rs421369	A	G	A	Hoxd9_MA0913.1	7	1	+	8.853608248980283	2.01446377162594	ACAATAAAAA
chr13	32153376	32153377	chr13:32153377:C:G	rs114451218	C	G	C	Hoxd9_MA0913.1	18	0	+	0	0	.
chr13	32165904	32165905	chr13:32165905:T:C	rs703217	T	C	T	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr13	32387950	32387951	chr13:32387951:C:T	rs4570704	C	T	C	Hoxd9_MA0913.1	24	0	+	0	0	.
chr13	32447648	32447649	chr13:32447649:G:A	rs187076109	G	A	G	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr13	32588061	32588062	chr13:32588062:A:C	rs1057175920	A	C	A	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr13	32656980	32656981	chr13:32656981:A:G	rs113028082	A	G	A	Hoxd9_MA0913.1	12	0	-	0	0	.
chr13	32669401	32669402	chr13:32669402:C:A	rs9596056	C	A	C	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr13	32959678	32959679	chr13:32959679:C:T	rs411835	C	T	T	Hoxd9_MA0913.1	17	0	-	0	0	.
chr13	32983508	32983509	chr13:32983509:G:A	rs471167	G	A	A	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr13	32983538	32983539	chr13:32983539:G:A	rs576696	G	A	A	Hoxd9_MA0913.1	11	0	+	0	0	.
chr13	33174640	33174641	chr13:33174641:T:C	rs9527172	T	C	T	Hoxd9_MA0913.1	8	1	+	8.32301137036169	7.801678332738202	GCAATAAATA
chr13	33174656	33174657	chr13:33174657:C:A	rs7319316	C	A	C	Hoxd9_MA0913.1	24	0	+	0	0	.
chr13	33183947	33183948	chr13:33183948:T:C	rs2555615	T	C	C	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr13	33245601	33245602	chr13:33245602:A:G	rs9591622	A	G	A	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr13	33258398	33258399	chr13:33258399:C:T	rs7327586	C	T	C	Hoxd9_MA0913.1	19	0	-	0	0	.
chr13	33392932	33392933	chr13:33392933:G:A	rs78149100	G	A	G	Hoxd9_MA0913.1	14	0	-	0	0	.
chr13	33418511	33418512	chr13:33418512:G:A	rs112969407	G	A	G	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr13	33510077	33510078	chr13:33510078:G:T	rs61945493	G	T	T	Hoxd9_MA0913.1	26	0	-	0	0	.
chr13	33543202	33543203	chr13:33543203:T:A	rs1002866867	T	A	T	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr13	33552378	33552379	chr13:33552379:T:C	rs148523264	T	C	T	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr13	33624299	33624300	chr13:33624300:A:G	rs7985396	A	G	A	Hoxd9_MA0913.1	13	0	+	0	0	.
chr13	33718689	33718690	chr13:33718690:T:C	rs9538444	T	C	T	Hoxd9_MA0913.1	20	0	+	0	0	.
chr13	33724309	33724310	chr13:33724310:A:C	rs7319504	A	C	A	Hoxd9_MA0913.1	22	0	-	0	0	.
chr13	33774599	33774600	chr13:33774600:T:C	rs7998762	T	C	-	Hoxd9_MA0913.1	24	0	+	0	0	.
chr13	33917294	33917295	chr13:33917295:G:A	rs17080164	G	A	G	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr13	34026000	34026001	chr13:34026001:G:A	rs1887836	G	A	G	Hoxd9_MA0913.1	23	0	-	0	0	.
chr13	34026012	34026013	chr13:34026013:T:G	rs1887837	T	G	G	Hoxd9_MA0913.1	11	0	-	0	0	.
chr13	34370212	34370213	chr13:34370213:T:A	rs1337956	T	A	T	Hoxd9_MA0913.1	11	0	+	0	0	.
chr13	34410688	34410689	chr13:34410689:A:C	rs1535997	A	C	C	Hoxd9_MA0913.1	4	1	-	9.801341972390743	6.509207720615763	GCAATAAAAA
chr13	34410709	34410710	chr13:34410710:C:T	rs10507417	C	T	C	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr13	34503482	34503483	chr13:34503483:G:A	rs73181268	G	A	G	Hoxd9_MA0913.1	21	0	-	0	0	.
chr13	34723321	34723322	chr13:34723322:A:T	rs9564575	A	T	A	Hoxd9_MA0913.1	4	1	-	8.323343304007485	5.636091879821329	CCAATAAAAA
chr13	34780714	34780715	chr13:34780715:C:A	rs12877118	C	A	C	Hoxd9_MA0913.1	22	0	-	0	0	.
chr13	34792962	34792963	chr13:34792963:C:T	rs744826	C	T	T	Hoxd9_MA0913.1	24	0	-	0	0	.
chr13	35457936	35457937	chr13:35457937:A:G	rs78528607	A	G	A	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr13	35531262	35531263	chr13:35531263:T:C	rs9565362	T	C	T	Hoxd9_MA0913.1	18	0	+	0	0	.
chr13	35593846	35593847	chr13:35593847:T:G	rs78374323	T	G	T	Hoxd9_MA0913.1	5	1	+	8.281840948251881	2.1013482174658225	GCAATTAATA
chr13	35593853	35593854	chr13:35593854:G:A	rs12866628	G	A	G	Hoxd9_MA0913.1	12	0	+	0	0	.
chr13	35744243	35744244	chr13:35744244:A:G	rs9565522	A	G	g	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr13	35815315	35815316	chr13:35815316:T:C	rs7986355	T	C	T	Hoxd9_MA0913.1	9	1	+	8.635860738282448	7.7976343601680895	GCCATAAAAT
chr13	35820798	35820799	chr13:35820799:G:A	rs117552022	G	A	G	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr13	36130281	36130282	chr13:36130282:G:A	rs74044531	G	A	G	Hoxd9_MA0913.1	18	0	+	0	0	.
chr13	36198243	36198244	chr13:36198244:G:A	rs2149423	G	A	A	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr13	36447666	36447667	chr13:36447667:C:T	rs73169289	C	T	C	Hoxd9_MA0913.1	0	1	-	9.412035922551908	8.464302199141448	GTAATTAAAA
chr13	37257127	37257128	chr13:37257128:T:C	rs1408227	T	C	A	Hoxd9_MA0913.1	7	1	-	7.943390935685037	1.104246458330694	GCAATTAAGT
chr13	37408275	37408276	chr13:37408276:G:A	rs1853329	G	A	G	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr13	37417398	37417399	chr13:37417399:T:C	rs7326940	T	C	C	Hoxd9_MA0913.1	17	0	+	0	0	.
chr13	37442291	37442292	chr13:37442292:C:T	rs148740300	C	T	C	Hoxd9_MA0913.1	29	0	-	0	0	.
chr13	37484319	37484320	chr13:37484320:G:A	rs45491203	G	A	G	Hoxd9_MA0913.1	3	1	+	7.973723031895638	9.801341972390743	GCAGTAAAAA
chr13	37566741	37566742	chr13:37566742:A:T	rs9547958	A	T	A	Hoxd9_MA0913.1	4	1	-	8.293678209511443	5.606426785325284	GCAATTAAAG
chr13	37601053	37601054	chr13:37601054:A:G	rs9547970	A	G	A	Hoxd9_MA0913.1	20	0	+	0	0	.
chr13	38399502	38399503	chr13:38399503:T:C	rs73462348	T	C	T	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr13	38662751	38662752	chr13:38662752:T:C	rs112526494	T	C	t	Hoxd9_MA0913.1	13	0	-	0	0	.
chr13	38767793	38767794	chr13:38767794:T:G	rs77981701	T	G	T	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr13	38951971	38951972	chr13:38951972:C:A	rs9315637	C	A	A	Hoxd9_MA0913.1	0	1	-	8.371167929409406	5.334025233456536	GTAATAAAAC
chr13	39108900	39108901	chr13:39108901:T:C	rs140028406	T	C	T	Hoxd9_MA0913.1	2	1	-	8.32301137036169	6.645552928903593	GCAATAAATA
chr13	39130634	39130635	chr13:39130635:G:A	rs75439114	G	A	G	Hoxd9_MA0913.1	19	0	-	0	0	.
chr13	39130642	39130643	chr13:39130643:C:G	rs10870730	C	G	C	Hoxd9_MA0913.1	11	0	-	0	0	.
chr13	39385341	39385342	chr13:39385342:A:G	rs17059778	A	G	A	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr13	39451887	39451888	chr13:39451888:A:G	rs577848041	A	G	A	Hoxd9_MA0913.1	5	1	+	8.371167929409406	2.1495047765135378	GTAATAAAAC
chr13	39465086	39465087	chr13:39465087:C:G	rs7996782	C	G	G	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr13	40429910	40429911	chr13:40429911:C:T	rs2324614	C	T	C	Hoxd9_MA0913.1	16	0	-	0	0	.
chr13	40550528	40550529	chr13:40550529:T:C	rs190258437	T	C	T	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr13	40595823	40595824	chr13:40595824:T:C	rs542084029	T	C	T	Hoxd9_MA0913.1	5	1	-	8.287725110553424	2.0660619576575554	GTCATAAAAT
chr13	40683233	40683234	chr13:40683234:A:G	rs7333119	A	G	A	Hoxd9_MA0913.1	6	1	+	9.209394307523764	2.3939736397444245	GTAATAAAAT
chr13	40764602	40764603	chr13:40764603:T:G	rs112544191	T	G	.	Hoxd9_MA0913.1	24	0	+	0	0	.
chr13	41246577	41246578	chr13:41246578:T:C	rs9525466	T	C	t	Hoxd9_MA0913.1	17	0	+	0	0	.
chr13	41407548	41407549	chr13:41407549:A:G	rs540806834	A	G	A	Hoxd9_MA0913.1	4	1	-	9.801341972390743	6.509207720615763	GCAATAAAAA
chr13	41467358	41467359	chr13:41467359:A:G	rs9594552	A	G	.	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr13	41501399	41501400	chr13:41501400:A:G	rs555264136	A	G	A	Hoxd9_MA0913.1	15	0	+	0	0	.
chr13	41597685	41597686	chr13:41597686:C:A	rs12584430	C	A	C	Hoxd9_MA0913.1	14	0	+	0	0	.
chr13	41645528	41645529	chr13:41645529:G:A	rs34482437	G	A	G	Hoxd9_MA0913.1	19	0	-	0	0	.
chr13	41645553	41645554	chr13:41645554:C:A	rs779701852	C	A	C	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr13	41849168	41849169	chr13:41849169:T:C	rs9562357	T	C	C	Hoxd9_MA0913.1	16	0	+	0	0	.
chr13	42103282	42103283	chr13:42103283:T:C	rs619508	T	C	T	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr13	42146562	42146563	chr13:42146563:G:A	rs9525580	G	A	G	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr13	42151981	42151982	chr13:42151982:G:A	rs9533015	G	A	G	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr13	42257185	42257186	chr13:42257186:A:G	rs1015936	A	G	A	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr13	42272523	42272524	chr13:42272524:C:A	rs548328972	C	A	C	Hoxd9_MA0913.1	15	0	-	0	0	.
chr13	42275807	42275808	chr13:42275808:G:A	rs4942104	G	A	G	Hoxd9_MA0913.1	11	0	+	0	0	.
chr13	42413220	42413221	chr13:42413221:C:T	rs9533099	C	T	C	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr13	42552113	42552114	chr13:42552114:A:G	rs116630700	A	G	A	Hoxd9_MA0913.1	2	1	+	8.2283733949328	6.550914953474702	GCAATAAAGA
chr13	42712976	42712977	chr13:42712977:G:A	rs34801486	G	A	A	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr13	43005293	43005294	chr13:43005294:G:A	rs78856476	G	A	G	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr13	43472557	43472558	chr13:43472558:A:G	rs192401525	A	G	A	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr13	43836532	43836533	chr13:43836533:T:C	rs9533646	T	C	T	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr13	43986833	43986834	chr13:43986834:T:C	rs4942263	T	C	T	Hoxd9_MA0913.1	4	1	+	8.334848631621252	5.042714379846271	GCAATAAAAG
chr13	44045756	44045757	chr13:44045757:G:T	rs7984684	G	T	T	Hoxd9_MA0913.1	20	0	+	0	0	.
chr13	44066332	44066333	chr13:44066333:G:A	rs58416091	G	A	A	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr13	44104008	44104009	chr13:44104009:A:C	rs74545732	A	C	A	Hoxd9_MA0913.1	14	0	+	0	0	.
chr13	44161033	44161034	chr13:44161034:C:T	rs191245390	C	T	C	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr13	44187158	44187159	chr13:44187159:G:A	rs2249711	G	A	A	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr13	44304475	44304476	chr13:44304476:T:G	rs1175215	T	G	T	Hoxd9_MA0913.1	2	1	-	7.932552609785828	7.010883412815486	GCAGTTAAAA
chr13	44323596	44323597	chr13:44323597:T:G	rs1536947	T	G	T	Hoxd9_MA0913.1	15	0	+	0	0	.
chr13	44668137	44668138	chr13:44668138:A:G	rs141134706	A	G	A	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr13	44765056	44765057	chr13:44765057:G:C	rs571216434	G	C	G	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr13	44771033	44771034	chr13:44771034:G:T	rs73175377	G	T	G	Hoxd9_MA0913.1	20	0	-	0	0	.
chr13	44771070	44771071	chr13:44771071:C:T	rs73175378	C	T	C	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr13	44803339	44803340	chr13:44803340:G:C	rs1983795	G	C	G	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr13	44854273	44854274	chr13:44854274:T:C	rs80221514	T	C	T	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr13	44873083	44873084	chr13:44873084:C:A	rs115833790	C	A	C	Hoxd9_MA0913.1	25	0	+	0	0	.
chr13	45434796	45434797	chr13:45434797:T:A	rs77225553	T	A	.	Hoxd9_MA0913.1	9	1	-	7.932552609785828	7.688740572647875	GCAGTTAAAA
chr13	45465813	45465814	chr13:45465814:A:G	rs73478455	A	G	.	Hoxd9_MA0913.1	25	0	+	0	0	.
chr13	45879381	45879382	chr13:45879382:C:G	rs60929075	C	G	c	Hoxd9_MA0913.1	26	0	-	0	0	.
chr13	45913021	45913022	chr13:45913022:C:T	rs2573280	C	T	T	Hoxd9_MA0913.1	28	0	+	0	0	.
chr13	45954762	45954763	chr13:45954763:A:G	rs145649799	A	G	A	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr13	46013095	46013096	chr13:46013096:G:C	rs111721625	G	C	G	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr13	46013126	46013127	chr13:46013127:G:C	rs7990095	G	C	C	Hoxd9_MA0913.1	17	0	+	0	0	.
chr13	46050494	46050495	chr13:46050495:T:C	rs9534297	T	C	T	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr13	46289827	46289828	chr13:46289828:T:C	rs7320490	T	C	C	Hoxd9_MA0913.1	22	0	-	0	0	.
chr13	46404002	46404003	chr13:46404003:G:A	rs146100422	G	A	g	Hoxd9_MA0913.1	22	0	-	0	0	.
chr13	46531083	46531084	chr13:46531084:T:C	rs9534419	T	C	C	Hoxd9_MA0913.1	21	0	-	0	0	.
chr13	46531095	46531096	chr13:46531096:A:G	rs9534420	A	G	A	Hoxd9_MA0913.1	9	1	-	9.168223885413955	8.329997507299597	GTAATTAAAT
chr13	46595666	46595667	chr13:46595667:T:A	rs117128304	T	A	T	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr13	46599215	46599216	chr13:46599216:C:T	rs111722649	C	T	C	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr13	46600774	46600775	chr13:46600775:A:G	rs1886965	A	G	A	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr13	46616318	46616319	chr13:46616319:T:C	rs112714951	T	C	T	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr13	46616337	46616338	chr13:46616338:C:T	rs79491744	C	T	T	Hoxd9_MA0913.1	13	0	+	0	0	.
chr13	46633392	46633393	chr13:46633393:C:T	rs74077043	C	T	C	Hoxd9_MA0913.1	11	0	+	0	0	.
chr13	46760048	46760049	chr13:46760049:G:C	rs7332790	G	C	C	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr13	46895832	46895833	chr13:46895833:G:T	rs1805055	G	T	G	Hoxd9_MA0913.1	17	0	-	0	0	.
chr13	46909071	46909072	chr13:46909072:A:G	rs9652194	A	G	A	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr13	47069620	47069621	chr13:47069621:G:T	rs11148028	G	T	G	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr13	47100057	47100058	chr13:47100058:T:C	rs7333418	T	C	C	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr13	47184100	47184101	chr13:47184101:T:C	rs9534563	T	C	T	Hoxd9_MA0913.1	22	0	+	0	0	.
chr13	47237972	47237973	chr13:47237973:A:G	rs145738898	A	G	A	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr13	47457578	47457579	chr13:47457579:T:C	rs10220222	T	C	C	Hoxd9_MA0913.1	11	0	-	0	0	.
chr13	48210351	48210352	chr13:48210352:T:C	rs187519156	T	C	T	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr13	48210356	48210357	chr13:48210357:T:A	rs192088366	T	A	T	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr13	48534576	48534577	chr13:48534577:C:T	rs74074916	C	T	C	Hoxd9_MA0913.1	1	1	+	8.853608248980283	8.505472621251258	ACAATAAAAA
chr13	48584634	48584635	chr13:48584635:A:T	rs144153159	A	T	A	Hoxd9_MA0913.1	29	0	-	0	0	.
chr13	48584679	48584680	chr13:48584680:T:C	rs9595932	T	C	T	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr13	48680529	48680530	chr13:48680530:G:T	rs1009815972	G	T	G	Hoxd9_MA0913.1	12	0	-	0	0	.
chr13	48737275	48737276	chr13:48737276:A:G	rs9526492	A	G	G	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr13	48859588	48859589	chr13:48859589:G:T	rs61949019	G	T	G	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr13	48859592	48859593	chr13:48859593:G:A	rs61949020	G	A	G	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr13	48859610	48859611	chr13:48859611:G:A	rs79568141	G	A	G	Hoxd9_MA0913.1	8	1	+	8.2283733949328	9.801341972390743	GCAATAAAGA
chr13	49126268	49126269	chr13:49126269:T:G	rs12428328	T	G	T	Hoxd9_MA0913.1	18	0	-	0	0	.
chr13	49561171	49561172	chr13:49561172:T:C	rs9596148	T	C	C	Hoxd9_MA0913.1	14	0	+	0	0	.
chr13	49679701	49679702	chr13:49679702:G:A	rs942030	G	A	G	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr13	49732084	49732085	chr13:49732085:G:C	rs3736830	G	C	C	Hoxd9_MA0913.1	0	1	+	9.453206344661718	7.97520767627846	GTAATAAAAA
chr13	49998551	49998552	chr13:49998552:G:C	rs9316482	G	C	G	Hoxd9_MA0913.1	23	0	+	0	0	.
chr13	50082967	50082968	chr13:50082968:A:G	rs55682878	A	G	A	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr13	50261578	50261579	chr13:50261579:C:T	rs2762051	C	T	c	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr13	50292418	50292419	chr13:50292419:C:T	rs79183521	C	T	C	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr13	50378949	50378950	chr13:50378950:A:G	rs431545	A	G	A	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr13	50386241	50386242	chr13:50386242:A:C	rs200220	A	C	C	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr13	50635251	50635252	chr13:50635252:G:A	rs145539019	G	A	g	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr13	51000904	51000905	chr13:51000905:A:G	rs3790025	A	G	G	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr13	51065304	51065305	chr13:51065305:C:T	rs9596433	C	T	T	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr13	51065336	51065337	chr13:51065337:T:A	rs9591384	T	A	T	Hoxd9_MA0913.1	20	0	+	0	0	.
chr13	51180941	51180942	chr13:51180942:A:G	rs9535609	A	G	A	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr13	51255356	51255357	chr13:51255357:A:G	rs9316531	A	G	A	Hoxd9_MA0913.1	14	0	+	0	0	.
chr13	51267020	51267021	chr13:51267021:C:T	rs964826	C	T	C	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr13	51495403	51495404	chr13:51495404:G:A	rs17595873	G	A	g	Hoxd9_MA0913.1	13	0	+	0	0	.
chr13	51645011	51645012	chr13:51645012:C:A	rs116422860	C	A	C	Hoxd9_MA0913.1	21	0	-	0	0	.
chr13	51783845	51783846	chr13:51783846:C:T	chr13:51783846:C:T	C	T	C	Hoxd9_MA0913.1	0	1	-	9.801341972390743	8.853608248980283	GCAATAAAAA
chr13	51874817	51874818	chr13:51874818:C:T	rs750488624	C	T	C	Hoxd9_MA0913.1	12	0	-	0	0	.
chr13	51874829	51874830	chr13:51874830:C:T	rs11617792	C	T	C	Hoxd9_MA0913.1	0	1	-	7.7976343601680895	6.84990063675763	GCCATAAAAC
chr13	51874833	51874834	chr13:51874834:G:A	rs58919798	G	A	G	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr13	51960020	51960021	chr13:51960021:G:T	rs78021873	G	T	G	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr13	52446534	52446535	chr13:52446535:A:C	rs61959671	A	C	A	Hoxd9_MA0913.1	27	0	-	0	0	.
chr13	52446558	52446559	chr13:52446559:C:T	rs115059474	C	T	C	Hoxd9_MA0913.1	3	1	-	7.932552609785828	9.760171550280933	GCAGTTAAAA
chr13	52885471	52885472	chr13:52885472:G:T	rs1323118	G	T	G	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr13	52981120	52981121	chr13:52981121:C:T	rs2226194	C	T	C	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr13	53069827	53069828	chr13:53069828:T:C	rs1936383	T	C	T	Hoxd9_MA0913.1	18	0	-	0	0	.
chr13	53080358	53080359	chr13:53080359:C:T	rs77306542	C	T	T	Hoxd9_MA0913.1	0	1	-	8.490366725581566	7.542633002171106	GTCATTAAAA
chr13	53783580	53783581	chr13:53783581:T:A	rs144803265	T	A	T	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr13	54311739	54311740	chr13:54311740:A:C	rs4351942	A	C	A	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr13	55008164	55008165	chr13:55008165:T:C	rs72623355	T	C	T	Hoxd9_MA0913.1	15	0	+	0	0	.
chr13	55052498	55052499	chr13:55052499:T:A	rs7986531	T	A	T	Hoxd9_MA0913.1	11	0	-	0	0	.
chr13	55154615	55154616	chr13:55154616:T:C	rs7334060	T	C	t	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr13	55553092	55553093	chr13:55553093:A:T	rs570561	A	T	T	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr13	56779677	56779678	chr13:56779678:G:A	rs116956062	G	A	G	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr13	56779685	56779686	chr13:56779686:C:A	rs299516	C	A	C	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr13	57507146	57507147	chr13:57507147:A:G	rs2320491	A	G	G	Hoxd9_MA0913.1	21	0	-	0	0	.
chr13	57532303	57532304	chr13:57532304:A:G	rs354799	A	G	A	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr13	57665723	57665724	chr13:57665724:A:C	chr13:57665724:A:C	A	C	A	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr13	57665761	57665762	chr13:57665762:A:G	rs114631687	A	G	A	Hoxd9_MA0913.1	18	0	+	0	0	.
chr13	58566517	58566518	chr13:58566518:C:T	rs9597776	C	T	C	Hoxd9_MA0913.1	26	0	+	0	0	.
chr13	58660214	58660215	chr13:58660215:G:T	rs9563625	G	T	G	Hoxd9_MA0913.1	0	1	-	8.323343304007485	8.853608248980283	CCAATAAAAA
chr13	59347423	59347424	chr13:59347424:T:C	rs1326095	T	C	T	Hoxd9_MA0913.1	23	0	+	0	0	.
chr13	59373699	59373700	chr13:59373700:A:G	rs4580053	A	G	A	Hoxd9_MA0913.1	21	0	-	0	0	.
chr13	59479055	59479056	chr13:59479056:G:A	rs539689305	G	A	G	Hoxd9_MA0913.1	22	0	+	0	0	.
chr13	59502850	59502851	chr13:59502851:T:G	rs4374050	T	G	T	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr13	59678225	59678226	chr13:59678226:A:G	rs2077741	A	G	A	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr13	59810676	59810677	chr13:59810677:A:C	rs75685443	A	C	A	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr13	59880713	59880714	chr13:59880714:C:T	rs1020647341	C	T	C	Hoxd9_MA0913.1	24	0	+	0	0	.
chr13	60282715	60282716	chr13:60282716:T:G	rs78212172	T	G	T	Hoxd9_MA0913.1	12	0	-	0	0	.
chr13	60612741	60612742	chr13:60612742:C:T	rs187398583	C	T	C	Hoxd9_MA0913.1	10	0	-	0	0	.
chr13	60612767	60612768	chr13:60612768:T:A	rs11839032	T	A	T	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr13	60707054	60707055	chr13:60707055:C:T	rs10507655	C	T	T	Hoxd9_MA0913.1	12	0	+	0	0	.
chr13	60795368	60795369	chr13:60795369:C:G	rs73547536	C	G	C	Hoxd9_MA0913.1	19	0	-	0	0	.
chr13	61289126	61289127	chr13:61289127:G:A	rs9539091	G	A	A	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr13	62056587	62056588	chr13:62056588:T:A	rs73221201	T	A	T	Hoxd9_MA0913.1	16	0	-	0	0	.
chr13	62208393	62208394	chr13:62208394:C:T	rs7987611	C	T	T	Hoxd9_MA0913.1	11	0	-	0	0	.
chr13	62388776	62388777	chr13:62388777:T:A	rs4438182	T	A	T	Hoxd9_MA0913.1	22	0	-	0	0	.
chr13	62529292	62529293	chr13:62529293:T:C	rs12867188	T	C	T	Hoxd9_MA0913.1	13	0	-	0	0	.
chr13	63435347	63435348	chr13:63435348:G:A	rs4420402	G	A	a	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr13	63690746	63690747	chr13:63690747:C:G	rs7335839	C	G	T	Hoxd9_MA0913.1	9	1	+	8.719303557138431	8.334848631621252	GCAATAAAAC
chr13	63690746	63690747	chr13:63690747:C:T	chr13:63690747:C:T	C	T	T	Hoxd9_MA0913.1	9	1	+	8.719303557138431	9.55752993525279	GCAATAAAAC
chr13	63980122	63980123	chr13:63980123:G:C	rs17078223	G	C	C	Hoxd9_MA0913.1	11	0	-	0	0	.
chr13	64025425	64025426	chr13:64025426:A:G	rs6562340	A	G	G	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr13	64025436	64025437	chr13:64025437:T:G	rs7326483	T	G	T	Hoxd9_MA0913.1	1	1	+	8.371167929409406	5.626738544853718	GTAATAAAAC
chr13	64088798	64088799	chr13:64088799:T:C	rs272380	T	C	C	Hoxd9_MA0913.1	19	0	+	0	0	.
chr13	64771231	64771232	chr13:64771232:C:A	rs111364681	C	A	C	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr13	64937226	64937227	chr13:64937227:T:C	rs9598867	T	C	T	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr13	64937231	64937232	chr13:64937232:T:C	rs9598868	T	C	t	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr13	64937249	64937250	chr13:64937250:C:T	rs9598869	C	T	C	Hoxd9_MA0913.1	16	0	+	0	0	.
chr13	65710703	65710704	chr13:65710704:C:T	rs66959455	C	T	C	Hoxd9_MA0913.1	27	0	+	0	0	.
chr13	65965652	65965653	chr13:65965653:A:G	rs78145933	A	G	A	Hoxd9_MA0913.1	1	1	-	9.168223885413955	9.51635951314298	GTAATTAAAT
chr13	66001386	66001387	chr13:66001387:G:C	rs9571524	G	C	G	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr13	66038380	66038381	chr13:66038381:A:G	rs17080601	A	G	A	Hoxd9_MA0913.1	5	1	-	8.281840948251881	4.888209598992322	GCAATTAATA
chr13	66307018	66307019	chr13:66307019:C:T	rs564359896	C	T	C	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr13	66624592	66624593	chr13:66624593:A:G	rs9529106	A	G	A	Hoxd9_MA0913.1	9	1	-	9.55752993525279	8.719303557138431	GCAATAAAAT
chr13	67281576	67281577	chr13:67281577:C:T	rs9541052	C	T	C	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr13	67281603	67281604	chr13:67281604:T:C	rs185979813	T	C	T	Hoxd9_MA0913.1	16	0	+	0	0	.
chr13	67713800	67713801	chr13:67713801:G:T	rs1039064381	G	T	G	Hoxd9_MA0913.1	9	1	-	7.7976343601680895	8.879672775420401	GCCATAAAAC
chr13	68376183	68376184	chr13:68376184:G:T	rs1380172	G	T	T	Hoxd9_MA0913.1	13	0	-	0	0	.
chr13	68376208	68376209	chr13:68376209:G:C	rs1380173	G	C	C	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr13	68836067	68836068	chr13:68836068:T:C	rs678487	T	C	C	Hoxd9_MA0913.1	29	0	+	0	0	.
chr13	68892924	68892925	chr13:68892925:A:C	rs74824443	A	C	A	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr13	68929380	68929381	chr13:68929381:A:G	rs116313547	A	G	A	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr13	69159467	69159468	chr13:69159468:A:G	rs113266430	A	G	A	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr13	70310232	70310233	chr13:70310233:C:G	rs12430511	C	G	G	Hoxd9_MA0913.1	17	0	+	0	0	.
chr13	70310239	70310240	chr13:70310240:T:C	rs4389041	T	C	T	Hoxd9_MA0913.1	24	0	+	0	0	.
chr13	70364689	70364690	chr13:70364690:T:G	rs8002715	T	G	G	Hoxd9_MA0913.1	23	0	-	0	0	.
chr13	70364702	70364703	chr13:70364703:G:A	rs8001690	G	A	A	Hoxd9_MA0913.1	10	0	-	0	0	.
chr13	70439298	70439299	chr13:70439299:T:G	rs1930855	T	G	G	Hoxd9_MA0913.1	11	0	+	0	0	.
chr13	70534744	70534745	chr13:70534745:A:G	rs9542369	A	G	G	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr13	71053058	71053059	chr13:71053059:A:C	rs9572632	A	C	A	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr13	71379082	71379083	chr13:71379083:T:C	rs9572729	T	C	T	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr13	72435469	72435470	chr13:72435470:T:C	rs9572979	T	C	T	Hoxd9_MA0913.1	14	0	-	0	0	.
chr13	72500565	72500566	chr13:72500566:C:T	rs17832446	C	T	C	Hoxd9_MA0913.1	14	0	-	0	0	.
chr13	72653062	72653063	chr13:72653063:C:G	rs66872366	C	G	C	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr13	72653734	72653735	chr13:72653735:T:G	rs76411225	T	G	T	Hoxd9_MA0913.1	12	0	-	0	0	.
chr13	72689525	72689526	chr13:72689526:T:C	rs9543073	T	C	T	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr13	72808955	72808956	chr13:72808956:G:A	rs79395061	G	A	G	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr13	73058287	73058288	chr13:73058288:G:C	rs147109234	G	C	G	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr13	73119646	73119647	chr13:73119647:C:T	rs2483181	C	T	T	Hoxd9_MA0913.1	12	0	+	0	0	.
chr13	73142488	73142489	chr13:73142489:G:A	rs4242949	G	A	G	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr13	73833010	73833011	chr13:73833011:T:C	rs9573308	T	C	C	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr13	74127967	74127968	chr13:74127968:C:T	rs7335976	C	T	T	Hoxd9_MA0913.1	11	0	-	0	0	.
chr13	74134329	74134330	chr13:74134330:C:A	rs909889041	C	A	C	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr13	74134336	74134337	chr13:74134337:G:A	rs1409430571	G	A	G	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr13	74138578	74138579	chr13:74138579:G:A	rs12430284	G	A	A	Hoxd9_MA0913.1	17	0	-	0	0	.
chr13	74166633	74166634	chr13:74166634:C:T	rs35688491	C	T	C	Hoxd9_MA0913.1	15	0	-	0	0	.
chr13	74647463	74647464	chr13:74647464:A:C	rs7139706	A	C	C	Hoxd9_MA0913.1	27	0	-	0	0	.
chr13	75052731	75052732	chr13:75052732:C:T	rs1340903	C	T	C	Hoxd9_MA0913.1	0	1	-	8.838502353310592	7.890768629900132	GCCATTAAAA
chr13	75129323	75129324	chr13:75129324:T:G	rs7985837	T	G	G	Hoxd9_MA0913.1	4	1	+	8.123883530932645	4.831749279157664	GCGATAAAAA
chr13	75484268	75484269	chr13:75484269:G:A	rs75754019	G	A	G	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr13	75490115	75490116	chr13:75490116:G:A	rs562275332	G	A	G	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr13	75591145	75591146	chr13:75591146:T:C	rs3783028	T	C	T	Hoxd9_MA0913.1	15	0	+	0	0	.
chr13	75621696	75621697	chr13:75621697:A:G	rs143470231	A	G	A	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr13	75643485	75643486	chr13:75643486:T:C	rs9318364	T	C	C	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr13	76378789	76378790	chr13:76378790:G:T	rs7322381	G	T	G	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr13	76769632	76769633	chr13:76769633:C:T	rs139252376	C	T	C	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr13	76875607	76875608	chr13:76875608:C:T	rs61962725	C	T	C	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr13	76942616	76942617	chr13:76942617:A:G	rs614171	A	G	G	Hoxd9_MA0913.1	24	0	+	0	0	.
chr13	77330025	77330026	chr13:77330026:G:A	rs115736965	G	A	G	Hoxd9_MA0913.1	19	0	-	0	0	.
chr13	77479289	77479290	chr13:77479290:T:C	rs75056117	T	C	t	Hoxd9_MA0913.1	12	0	-	0	0	.
chr13	77815557	77815558	chr13:77815558:C:G	rs1279675	C	G	C	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr13	78046234	78046235	chr13:78046235:C:T	rs2585528	C	T	C	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr13	78084937	78084938	chr13:78084938:A:G	rs1330881	A	G	A	Hoxd9_MA0913.1	12	0	+	0	0	.
chr13	78239442	78239443	chr13:78239443:G:A	rs9318531	G	A	A	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr13	78700553	78700554	chr13:78700554:T:C	rs1218181	T	C	T	Hoxd9_MA0913.1	22	0	-	0	0	.
chr13	78700556	78700557	chr13:78700557:A:G	rs9544869	A	G	G	Hoxd9_MA0913.1	19	0	-	0	0	.
chr13	78893344	78893345	chr13:78893345:C:T	rs80190316	C	T	c	Hoxd9_MA0913.1	14	0	+	0	0	.
chr13	79226088	79226089	chr13:79226089:C:G	rs7987995	C	G	C	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr13	79369302	79369303	chr13:79369303:A:G	rs9318634	A	G	A	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr13	79937018	79937019	chr13:79937019:C:T	rs752239044	C	T	C	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr13	80049100	80049101	chr13:80049101:A:C	rs1263854314	A	C	A	Hoxd9_MA0913.1	6	1	+	8.490366725581566	4.015789862913362	GTCATTAAAA
chr13	80235684	80235685	chr13:80235685:A:C	rs17072502	A	C	A	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr13	80250854	80250855	chr13:80250855:T:C	rs9531036	T	C	C	Hoxd9_MA0913.1	28	0	+	0	0	.
chr13	80338704	80338705	chr13:80338705:A:C	rs73558933	A	C	A	Hoxd9_MA0913.1	5	1	+	8.853608248980283	5.418806477610913	ACAATAAAAA
chr13	80551724	80551725	chr13:80551725:G:A	rs9531075	G	A	G	Hoxd9_MA0913.1	28	0	-	0	0	.
chr13	80563832	80563833	chr13:80563833:T:G	rs9318709	T	G	T	Hoxd9_MA0913.1	6	1	-	9.453206344661718	4.978629481993513	GTAATAAAAA
chr13	80871895	80871896	chr13:80871896:C:G	rs35494402	C	G	C	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr13	80957649	80957650	chr13:80957650:G:A	rs17197153	G	A	G	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr13	81114517	81114518	chr13:81114518:A:C	rs11617688	A	C	C	Hoxd9_MA0913.1	20	0	+	0	0	.
chr13	81394197	81394198	chr13:81394198:A:G	rs1105828	A	G	A	Hoxd9_MA0913.1	3	1	+	9.55752993525279	7.7299109947576845	GCAATAAAAT
chr13	81911398	81911399	chr13:81911399:A:G	rs7491779	A	G	A	Hoxd9_MA0913.1	24	0	-	0	0	.
chr13	82089307	82089308	chr13:82089308:T:C	rs7997729	T	C	C	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr13	82171511	82171512	chr13:82171512:T:C	rs7323552	T	C	T	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr13	82200933	82200934	chr13:82200934:C:T	rs7991235	C	T	C	Hoxd9_MA0913.1	16	0	+	0	0	.
chr13	82542934	82542935	chr13:82542935:C:T	rs12429050	C	T	C	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr13	82587057	82587058	chr13:82587058:C:T	rs9652250	C	T	c	Hoxd9_MA0913.1	15	0	-	0	0	.
chr13	82766986	82766987	chr13:82766987:G:A	rs1072702	G	A	G	Hoxd9_MA0913.1	0	1	+	7.75646393805828	6.808730214647819	GCCATTAAAC
chr13	82967552	82967553	chr13:82967553:C:T	rs1487776	C	T	c	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr13	83151350	83151351	chr13:83151351:T:C	rs265656	T	C	T	Hoxd9_MA0913.1	4	1	+	8.323343304007485	5.031209052232505	CCAATAAAAA
chr13	83498701	83498702	chr13:83498702:A:T	chr13:83498702:A:T	A	T	A	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr13	83675605	83675606	chr13:83675606:T:G	rs2329284	T	G	G	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr13	83876899	83876900	chr13:83876900:A:G	rs41561712	A	G	A	Hoxd9_MA0913.1	13	0	+	0	0	.
chr13	84776087	84776088	chr13:84776088:A:G	rs9546861	A	G	a	Hoxd9_MA0913.1	3	1	+	8.32301137036169	6.4953924298665875	GCAATAAATA
chr13	84892933	84892934	chr13:84892934:T:C	rs9546910	T	C	-	Hoxd9_MA0913.1	20	0	+	0	0	.
chr13	85228855	85228856	chr13:85228856:C:T	rs79082799	C	T	C	Hoxd9_MA0913.1	28	0	+	0	0	.
chr13	85245955	85245956	chr13:85245956:T:C	rs1602221	T	C	C	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr13	85347688	85347689	chr13:85347689:C:A	rs9531775	C	A	C	Hoxd9_MA0913.1	20	0	+	0	0	.
chr13	85462649	85462650	chr13:85462650:A:G	rs9531792	A	G	A	Hoxd9_MA0913.1	27	0	+	0	0	.
chr13	86020570	86020571	chr13:86020571:C:A	rs9547471	C	A	A	Hoxd9_MA0913.1	0	1	-	7.75646393805828	4.71932124210541	GCCATTAAAC
chr13	86082486	86082487	chr13:86082487:A:G	rs61964681	A	G	a	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr13	86478312	86478313	chr13:86478313:A:T	rs11069726	A	T	T	Hoxd9_MA0913.1	13	0	-	0	0	.
chr13	86810844	86810845	chr13:86810845:A:G	rs9523416	A	G	A	Hoxd9_MA0913.1	9	1	-	8.635860738282448	7.7976343601680895	GCCATAAAAT
chr13	87130293	87130294	chr13:87130294:T:C	rs55834633	T	C	C	Hoxd9_MA0913.1	13	0	-	0	0	.
chr13	87999627	87999628	chr13:87999628:C:A	rs549186267	C	A	C	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr13	88154174	88154175	chr13:88154175:T:C	rs9558513	T	C	T	Hoxd9_MA0913.1	9	1	-	8.32301137036169	6.856518029592199	GCAATAAATA
chr13	88154187	88154188	chr13:88154188:G:A	rs7990939	G	A	A	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr13	88339406	88339407	chr13:88339407:C:T	rs2085227	C	T	T	Hoxd9_MA0913.1	9	1	+	7.7976343601680895	8.635860738282448	GCCATAAAAC
chr13	88600399	88600400	chr13:88600400:A:G	rs9515101	A	G	A	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr13	89155473	89155474	chr13:89155474:C:G	rs7336781	C	G	C	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr13	89726819	89726820	chr13:89726820:C:A	rs189794299	C	A	C	Hoxd9_MA0913.1	0	1	-	8.371167929409406	5.334025233456536	GTAATAAAAC
chr13	89920679	89920680	chr13:89920680:A:T	rs1341656	A	T	A	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr13	90177609	90177610	chr13:90177610:T:C	rs144737357	T	C	T	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr13	90242828	90242829	chr13:90242829:T:C	rs9670541	T	C	T	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr13	90386249	90386250	chr13:90386250:A:C	rs9560619	A	C	C	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr13	90485763	90485764	chr13:90485764:A:G	rs993377	A	G	G	Hoxd9_MA0913.1	18	0	+	0	0	.
chr13	90496963	90496964	chr13:90496964:A:G	rs13378798	A	G	A	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr13	90801815	90801816	chr13:90801816:G:C	rs9523086	G	C	G	Hoxd9_MA0913.1	23	0	+	0	0	.
chr13	90819848	90819849	chr13:90819849:A:G	rs9523101	A	G	G	Hoxd9_MA0913.1	1	1	-	9.453206344661718	9.801341972390743	GTAATAAAAA
chr13	91018652	91018653	chr13:91018653:A:G	rs4326907	A	G	A	Hoxd9_MA0913.1	16	0	+	0	0	.
chr13	91279295	91279296	chr13:91279296:T:C	rs66691665	T	C	T	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr13	91745884	91745885	chr13:91745885:C:G	rs16946681	C	G	C	Hoxd9_MA0913.1	25	0	-	0	0	.
chr13	91745894	91745895	chr13:91745895:A:T	rs77363980	A	T	A	Hoxd9_MA0913.1	15	0	-	0	0	.
chr13	91774237	91774238	chr13:91774238:G:A	rs1445397	G	A	A	Hoxd9_MA0913.1	26	0	-	0	0	.
chr13	91853767	91853768	chr13:91853768:A:T	rs7996272	A	T	A	Hoxd9_MA0913.1	12	0	+	0	0	.
chr13	92187528	92187529	chr13:92187529:T:C	rs191577305	T	C	T	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr13	92383095	92383096	chr13:92383096:C:T	rs9523654	C	T	C	Hoxd9_MA0913.1	2	1	+	8.879672775420401	3.3509979405399606	GCCATAAAAA
chr13	92611878	92611879	chr13:92611879:C:T	rs11617429	C	T	C	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr13	92803052	92803053	chr13:92803053:C:T	rs60229870	C	T	C	Hoxd9_MA0913.1	13	0	-	0	0	.
chr13	92963158	92963159	chr13:92963159:A:G	rs17299920	A	G	A	Hoxd9_MA0913.1	8	1	+	9.760171550280933	8.187202972822991	GCAATTAAAA
chr13	93415032	93415033	chr13:93415033:G:A	rs1323990	G	A	A	Hoxd9_MA0913.1	13	0	-	0	0	.
chr13	93451855	93451856	chr13:93451856:T:C	rs1445275	T	C	T	Hoxd9_MA0913.1	8	1	-	9.168223885413955	7.595255307956012	GTAATTAAAT
chr13	93480808	93480809	chr13:93480809:T:C	rs7982827	T	C	T	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr13	93807221	93807222	chr13:93807222:T:C	rs9516294	T	C	T	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr13	93810598	93810599	chr13:93810599:G:A	rs9524231	G	A	G	Hoxd9_MA0913.1	0	1	+	9.168223885413955	8.220490162003495	GTAATTAAAT
chr13	93881291	93881292	chr13:93881292:G:A	rs61964366	G	A	G	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr13	93950785	93950786	chr13:93950786:T:C	rs981341	T	C	C	Hoxd9_MA0913.1	27	0	-	0	0	.
chr13	93982735	93982736	chr13:93982736:A:G	rs9301921	A	G	A	Hoxd9_MA0913.1	19	0	+	0	0	.
chr13	94128612	94128613	chr13:94128613:C:G	rs138550383	C	G	c	Hoxd9_MA0913.1	13	0	+	0	0	.
chr13	94211663	94211664	chr13:94211664:G:A	rs1333247	G	A	A	Hoxd9_MA0913.1	17	0	+	0	0	.
chr13	94318563	94318564	chr13:94318564:G:A	rs11618219	G	A	G	Hoxd9_MA0913.1	19	0	+	0	0	.
chr13	94318564	94318565	chr13:94318565:C:T	rs11620502	C	T	C	Hoxd9_MA0913.1	20	0	+	0	0	.
chr13	94394786	94394787	chr13:94394787:T:C	rs4773790	T	C	C	Hoxd9_MA0913.1	29	0	-	0	0	.
chr13	94484362	94484363	chr13:94484363:T:C	rs16949859	T	C	T	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr13	95317649	95317650	chr13:95317650:C:T	rs7981674	C	T	C	Hoxd9_MA0913.1	28	0	+	0	0	.
chr13	95457090	95457091	chr13:95457091:T:C	rs35970607	T	C	C	Hoxd9_MA0913.1	21	0	-	0	0	.
chr13	95541611	95541612	chr13:95541612:A:G	rs146786783	A	G	A	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr13	95784956	95784957	chr13:95784957:A:T	rs17879751	A	T	-	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr13	95784957	95784958	chr13:95784958:A:T	rs17880413	A	T	a	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr13	95948887	95948888	chr13:95948888:G:A	rs1486203894	G	A	G	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr13	96173758	96173759	chr13:96173759:T:C	rs4441137	T	C	C	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr13	96273298	96273299	chr13:96273299:G:T	rs7986153	G	T	T	Hoxd9_MA0913.1	12	0	-	0	0	.
chr13	96473140	96473141	chr13:96473141:G:A	rs913427	G	A	A	Hoxd9_MA0913.1	11	0	-	0	0	.
chr13	97880173	97880174	chr13:97880174:G:T	rs78665916	G	T	G	Hoxd9_MA0913.1	11	0	-	0	0	.
chr13	97880528	97880529	chr13:97880529:A:C	rs7985440	A	C	C	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr13	97997769	97997770	chr13:97997770:G:T	rs651241	G	T	T	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr13	98233757	98233758	chr13:98233758:A:G	rs868941	A	G	A	Hoxd9_MA0913.1	22	0	-	0	0	.
chr13	98262520	98262521	chr13:98262521:C:G	rs11617852	C	G	C	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr13	98324044	98324045	chr13:98324045:T:G	rs587142	T	G	T	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr13	98401780	98401781	chr13:98401781:T:C	rs7333581	T	C	C	Hoxd9_MA0913.1	21	0	+	0	0	.
chr13	98544054	98544055	chr13:98544055:A:G	rs117383866	A	G	A	Hoxd9_MA0913.1	11	0	+	0	0	.
chr13	98578011	98578012	chr13:98578012:C:T	rs3809366	C	T	C	Hoxd9_MA0913.1	21	0	-	0	0	.
chr13	98814260	98814261	chr13:98814261:C:A	rs772309	C	A	C	Hoxd9_MA0913.1	13	0	-	0	0	.
chr13	98844265	98844266	chr13:98844266:T:C	rs10459306	T	C	T	Hoxd9_MA0913.1	13	0	-	0	0	.
chr13	99192542	99192543	chr13:99192543:T:C	rs7338462	T	C	T	Hoxd9_MA0913.1	23	0	-	0	0	.
chr13	99219443	99219444	chr13:99219444:T:G	rs11617167	T	G	T	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr13	99628537	99628538	chr13:99628538:T:G	rs17611302	T	G	T	Hoxd9_MA0913.1	4	1	+	9.209394307523764	5.917260055748785	GTAATAAAAT
chr13	99751954	99751955	chr13:99751955:T:C	rs7984112	T	C	C	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr13	99892080	99892081	chr13:99892081:C:T	rs117273869	C	T	C	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr13	99895258	99895259	chr13:99895259:T:C	rs141658308	T	C	T	Hoxd9_MA0913.1	2	1	-	8.282172881897674	6.604714440439576	CCAATTAAAA
chr13	99912086	99912087	chr13:99912087:G:A	rs73564927	G	A	G	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr13	99973950	99973951	chr13:99973951:C:A	rs80074960	C	A	C	Hoxd9_MA0913.1	22	0	+	0	0	.
chr13	100657076	100657077	chr13:100657077:A:G	rs1770359	A	G	G	Hoxd9_MA0913.1	9	1	+	8.879672775420401	7.4131794346509094	GCCATAAAAA
chr13	100675881	100675882	chr13:100675882:C:G	rs9518131	C	G	C	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr13	100737507	100737508	chr13:100737508:C:T	rs1151366	C	T	C	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr13	100954814	100954815	chr13:100954815:T:C	rs9513829	T	C	T	Hoxd9_MA0913.1	23	0	-	0	0	.
chr13	101121854	101121855	chr13:101121855:T:C	rs9557591	T	C	T	Hoxd9_MA0913.1	4	1	+	7.973723031895638	4.681588780120659	GCAGTAAAAA
chr13	101390513	101390514	chr13:101390514:A:G	rs145547045	A	G	A	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr13	101520073	101520074	chr13:101520074:C:T	rs12586000	C	T	C	Hoxd9_MA0913.1	9	1	+	8.371167929409406	9.209394307523764	GTAATAAAAC
chr13	101545710	101545711	chr13:101545711:T:A	rs192287294	T	A	T	Hoxd9_MA0913.1	16	0	+	0	0	.
chr13	101574313	101574314	chr13:101574314:C:T	rs2783396	C	T	c	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr13	101584095	101584096	chr13:101584096:G:C	rs9513922	G	C	a	Hoxd9_MA0913.1	0	1	+	9.168223885413955	7.690225217030696	GTAATTAAAT
chr13	101680895	101680896	chr13:101680896:G:A	rs9518488	G	A	A	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr13	102130926	102130927	chr13:102130927:C:T	rs16959792	C	T	C	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr13	102203140	102203141	chr13:102203141:C:T	rs655067	C	T	T	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr13	102287127	102287128	chr13:102287128:A:T	rs138837964	A	T	A	Hoxd9_MA0913.1	5	1	+	8.853608248980283	8.812437826870472	ACAATAAAAA
chr13	102326253	102326254	chr13:102326254:A:G	rs9518703	A	G	A	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr13	102487638	102487639	chr13:102487639:T:G	rs1927378	T	G	T	Hoxd9_MA0913.1	26	0	-	0	0	.
chr13	102556573	102556574	chr13:102556574:G:A	rs150422180	G	A	G	Hoxd9_MA0913.1	21	0	-	0	0	.
chr13	102693786	102693787	chr13:102693787:G:A	rs9518813	G	A	G	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr13	102905006	102905007	chr13:102905007:A:G	rs9557951	A	G	A	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr13	102965952	102965953	chr13:102965953:A:G	rs2026089	A	G	A	Hoxd9_MA0913.1	22	0	-	0	0	.
chr13	103005218	103005219	chr13:103005219:C:T	rs9518898	C	T	C	Hoxd9_MA0913.1	11	0	+	0	0	.
chr13	103326551	103326552	chr13:103326552:G:C	rs12874518	G	C	G	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr13	103374499	103374500	chr13:103374500:G:T	rs4290349	G	T	G	Hoxd9_MA0913.1	14	0	+	0	0	.
chr13	103883220	103883221	chr13:103883221:C:A	rs9300876	C	A	A	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr13	103977431	103977432	chr13:103977432:G:T	rs2806801	G	T	T	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr13	104002349	104002350	chr13:104002350:C:T	rs2791246	C	T	C	Hoxd9_MA0913.1	0	1	-	8.287725110553424	7.3399913871429625	GTCATAAAAT
chr13	104067472	104067473	chr13:104067473:G:T	rs2806764	G	T	T	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr13	104067475	104067476	chr13:104067476:T:C	rs80295554	T	C	T	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr13	104264526	104264527	chr13:104264527:C:A	rs1330519	C	A	A	Hoxd9_MA0913.1	1	1	+	8.812437826870472	6.392619450845213	ACAATTAAAA
chr13	104297043	104297044	chr13:104297044:G:A	rs9519274	G	A	A	Hoxd9_MA0913.1	23	0	-	0	0	.
chr13	104758048	104758049	chr13:104758049:G:A	rs115573948	G	A	G	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr13	105318156	105318157	chr13:105318157:G:A	rs10467230	G	A	G	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr13	105327682	105327683	chr13:105327683:G:A	rs9805202	G	A	G	Hoxd9_MA0913.1	25	0	+	0	0	.
chr13	105591279	105591280	chr13:105591280:A:C	rs1345505	A	C	A	Hoxd9_MA0913.1	13	0	+	0	0	.
chr13	105608771	105608772	chr13:105608772:T:C	rs17490193	T	C	C	Hoxd9_MA0913.1	26	0	+	0	0	.
chr13	105608819	105608820	chr13:105608820:A:G	rs149449054	A	G	A	Hoxd9_MA0913.1	18	0	-	0	0	.
chr13	105608851	105608852	chr13:105608852:C:T	rs191196199	C	T	C	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr13	105930322	105930323	chr13:105930323:C:T	rs12876598	C	T	C	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr13	106018954	106018955	chr13:106018955:G:A	rs7984631	G	A	A	Hoxd9_MA0913.1	28	0	+	0	0	.
chr13	106247228	106247229	chr13:106247229:G:C	rs1830939	G	C	G	Hoxd9_MA0913.1	13	0	+	0	0	.
chr13	106349677	106349678	chr13:106349678:G:A	rs9520038	G	A	G	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr13	106521404	106521405	chr13:106521405:T:G	rs2391340	T	G	T	Hoxd9_MA0913.1	1	1	+	8.329997507299597	5.585568122743908	GTAATTAAAC
chr13	106643926	106643927	chr13:106643927:G:T	rs12427554	G	T	G	Hoxd9_MA0913.1	23	0	+	0	0	.
chr13	106709374	106709375	chr13:106709375:G:T	rs9520146	G	T	T	Hoxd9_MA0913.1	29	0	-	0	0	.
chr13	107374367	107374368	chr13:107374368:C:T	rs12864261	C	T	C	Hoxd9_MA0913.1	11	0	-	0	0	.
chr13	107712375	107712376	chr13:107712376:G:A	rs16970965	G	A	G	Hoxd9_MA0913.1	0	1	+	8.719303557138431	7.7715698337279715	GCAATAAAAC
chr13	108056507	108056508	chr13:108056508:C:G	rs111906567	C	G	C	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr13	108056510	108056511	chr13:108056511:G:A	rs12876800	G	A	G	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr13	108955917	108955918	chr13:108955918:A:C	rs946817987	A	C	A	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr13	109241780	109241781	chr13:109241781:T:C	rs746	T	C	T	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr13	109336777	109336778	chr13:109336778:T:C	rs9583361	T	C	T	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr13	109400275	109400276	chr13:109400276:C:T	rs4773043	C	T	C	Hoxd9_MA0913.1	27	0	-	0	0	.
chr13	109400295	109400296	chr13:109400296:T:C	rs77513608	T	C	t	Hoxd9_MA0913.1	7	1	-	8.719303557138431	1.8801590797840877	GCAATAAAAC
chr13	109686106	109686107	chr13:109686107:G:A	rs9587958	G	A	G	Hoxd9_MA0913.1	2	1	+	8.082713108822833	9.760171550280933	GCGATTAAAA
chr13	109720687	109720688	chr13:109720688:T:A	rs1411551	T	A	T	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr13	109971199	109971200	chr13:109971200:G:C	rs1010744553	G	C	t	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr13	110102834	110102835	chr13:110102835:T:C	rs56314927	T	C	T	Hoxd9_MA0913.1	3	1	-	9.209394307523764	7.381775367028661	GTAATAAAAT
chr13	110298382	110298383	chr13:110298383:T:C	rs150792489	T	C	T	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr13	110362985	110362986	chr13:110362986:G:T	rs9521715	G	T	G	Hoxd9_MA0913.1	2	1	-	8.490366725581566	9.412035922551908	GTCATTAAAA
chr13	110403402	110403403	chr13:110403403:A:G	rs7321362	A	G	A	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr13	110409810	110409811	chr13:110409811:G:C	rs79698999	G	C	G	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr13	110412917	110412918	chr13:110412918:G:A	rs9515207	G	A	A	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr13	110416052	110416053	chr13:110416053:A:G	rs184351903	A	G	G	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr13	110417813	110417814	chr13:110417814:A:G	rs9515208	A	G	G	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr13	110417823	110417824	chr13:110417824:C:T	rs9515209	C	T	C	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr13	110423310	110423311	chr13:110423311:T:G	rs8001158	T	G	T	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr13	110452484	110452485	chr13:110452485:G:A	rs11617745	G	A	G	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr13	110470545	110470546	chr13:110470546:T:C	rs7988399	T	C	C	Hoxd9_MA0913.1	16	0	-	0	0	.
chr13	110593907	110593908	chr13:110593908:G:A	rs7334268	G	A	G	Hoxd9_MA0913.1	20	0	+	0	0	.
chr13	110610180	110610181	chr13:110610181:A:C	rs76664666	A	C	A	Hoxd9_MA0913.1	18	0	+	0	0	.
chr13	110857487	110857488	chr13:110857488:C:T	rs7994952	C	T	C	Hoxd9_MA0913.1	12	0	+	0	0	.
chr13	110960343	110960344	chr13:110960344:C:T	rs9522020	C	T	c	Hoxd9_MA0913.1	17	0	+	0	0	.
chr13	111143074	111143075	chr13:111143075:G:C	rs7337260	G	C	C	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr13	111144625	111144626	chr13:111144626:G:A	rs831168	G	A	G	Hoxd9_MA0913.1	14	0	+	0	0	.
chr13	111401483	111401484	chr13:111401484:C:G	rs186416540	C	G	C	Hoxd9_MA0913.1	24	0	+	0	0	.
chr13	111855284	111855285	chr13:111855285:T:A	rs12871153	T	A	A	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr13	111901119	111901120	chr13:111901120:T:C	rs1923745	T	C	t	Hoxd9_MA0913.1	21	0	-	0	0	.
chr13	111954535	111954536	chr13:111954536:T:C	rs1290121	T	C	T	Hoxd9_MA0913.1	3	1	-	8.812437826870472	6.984818886375368	ACAATTAAAA
chr13	111956091	111956092	chr13:111956092:C:T	rs183158688	C	T	C	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr13	112078108	112078109	chr13:112078109:A:G	rs75815126	A	G	A	Hoxd9_MA0913.1	22	0	+	0	0	.
chr13	112122568	112122569	chr13:112122569:C:T	rs113406265	C	T	C	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr13	112386114	112386115	chr13:112386115:C:T	rs2183445	C	T	C	Hoxd9_MA0913.1	12	0	-	0	0	.
chr13	112509994	112509995	chr13:112509995:C:A	rs7336986	C	A	C	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr13	112523600	112523601	chr13:112523601:A:C	rs9324307	A	C	A	Hoxd9_MA0913.1	11	0	-	0	0	.
chr13	112531230	112531231	chr13:112531231:G:C	rs9550122	G	C	G	Hoxd9_MA0913.1	2	1	-	8.531537147691377	7.775747903203619	GTCATAAAAA
chr13	112760770	112760771	chr13:112760771:A:G	rs390657	A	G	G	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr13	112767689	112767690	chr13:112767690:C:T	rs421851	C	T	T	Hoxd9_MA0913.1	1	1	+	8.853608248980283	8.505472621251258	ACAATAAAAA
chr13	112785903	112785904	chr13:112785904:T:C	rs282623	T	C	T	Hoxd9_MA0913.1	23	0	+	0	0	.
chr13	113097742	113097743	chr13:113097743:A:T	rs1046205	A	T	A	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr13	113098483	113098484	chr13:113098484:G:A	chr13:113098484:G:A	G	A	G	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr13	113493493	113493494	chr13:113493494:C:T	rs76425685	C	T	C	Hoxd9_MA0913.1	21	0	+	0	0	.
chr13	113908206	113908207	chr13:113908207:T:G	rs56332614	T	G	g	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr13	113931853	113931854	chr13:113931854:C:T	rs61966665	C	T	C	Hoxd9_MA0913.1	28	0	+	0	0	.
chr13	113978727	113978728	chr13:113978728:A:G	rs11552972	A	G	G	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr13	114047307	114047308	chr13:114047308:G:A	rs138477511	G	A	G	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr13	114047350	114047351	chr13:114047351:A:G	rs7316924	A	G	G	Hoxd9_MA0913.1	25	0	+	0	0	.
chr13	114090197	114090198	chr13:114090198:C:T	rs7335140	C	T	c	Hoxd9_MA0913.1	0	1	-	8.329997507299597	7.382263783889136	GTAATTAAAC
chr13	114159083	114159084	chr13:114159084:G:A	rs429351	G	A	A	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr13	114334388	114334389	chr13:114334389:C:G	rs17067952	C	G	c	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr14	19668399	19668400	chr14:19668400:T:C	rs4619312	T	C	.	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr14	19878161	19878162	chr14:19878162:A:G	rs1686537	A	G	G	Hoxd9_MA0913.1	4	1	-	8.371167929409406	5.079033677634427	GTAATAAAAC
chr14	20501512	20501513	chr14:20501513:T:C	rs71410231	T	C	T	Hoxd9_MA0913.1	17	0	-	0	0	.
chr14	20625573	20625574	chr14:20625574:A:G	rs1243679	A	G	G	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr14	20625591	20625592	chr14:20625592:G:A	rs1243680	G	A	A	Hoxd9_MA0913.1	14	0	+	0	0	.
chr14	20727617	20727618	chr14:20727618:A:G	rs73574051	A	G	A	Hoxd9_MA0913.1	6	1	+	9.412035922551908	2.5966152547725674	GTAATTAAAA
chr14	20782426	20782427	chr14:20782427:C:G	rs934175119	C	G	C	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr14	20804563	20804564	chr14:20804564:T:G	rs28378018	T	G	T	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr14	21043298	21043299	chr14:21043299:G:C	rs1263872	G	C	C	Hoxd9_MA0913.1	29	0	+	0	0	.
chr14	21071979	21071980	chr14:21071980:G:A	rs80065473	G	A	G	Hoxd9_MA0913.1	1	1	-	7.7976343601680895	7.449498732439066	GCCATAAAAC
chr14	21071980	21071981	chr14:21071981:C:A	rs79621700	C	A	C	Hoxd9_MA0913.1	0	1	-	7.7976343601680895	4.76049166421522	GCCATAAAAC
chr14	21185781	21185782	chr14:21185782:G:A	rs28521294	G	A	A	Hoxd9_MA0913.1	24	0	-	0	0	.
chr14	21191864	21191865	chr14:21191865:C:T	rs146379460	C	T	C	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr14	21248733	21248734	chr14:21248734:T:C	rs4982437	T	C	T	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr14	21667934	21667935	chr14:21667935:A:T	rs12892066	A	T	A	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr14	22160219	22160220	chr14:22160220:A:T	rs760010	A	T	A	Hoxd9_MA0913.1	8	1	+	8.531537147691377	7.053206545662325	GTCATAAAAA
chr14	22178305	22178306	chr14:22178306:C:G	rs28407901	C	G	G	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr14	22179459	22179460	chr14:22179460:G:A	rs61972228	G	A	g	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr14	22252801	22252802	chr14:22252802:G:A	rs10141706	G	A	G	Hoxd9_MA0913.1	22	0	-	0	0	.
chr14	22281923	22281924	chr14:22281924:G:A	rs59234370	G	A	G	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr14	22281938	22281939	chr14:22281939:G:A	rs116756270	G	A	g	Hoxd9_MA0913.1	0	1	+	9.209394307523764	8.261660584113304	GTAATAAAAT
chr14	22397437	22397438	chr14:22397438:G:A	rs1034377	G	A	G	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr14	22483098	22483099	chr14:22483099:A:G	rs227861	A	G	G	Hoxd9_MA0913.1	25	0	-	0	0	.
chr14	22569142	22569143	chr14:22569143:G:T	rs34253874	G	T	T	Hoxd9_MA0913.1	11	0	+	0	0	.
chr14	22646677	22646678	chr14:22646678:T:C	rs57312906	T	C	t	Hoxd9_MA0913.1	26	0	-	0	0	.
chr14	22983275	22983276	chr14:22983276:G:A	rs75981288	G	A	G	Hoxd9_MA0913.1	10	0	+	0	0	.
chr14	22998070	22998071	chr14:22998071:C:T	rs11628189	C	T	C	Hoxd9_MA0913.1	1	1	+	7.8800714937946905	7.531935866065666	GCGATAAAAT
chr14	23008383	23008384	chr14:23008384:G:A	rs8003201	G	A	G	Hoxd9_MA0913.1	18	0	-	0	0	.
chr14	23010504	23010505	chr14:23010505:A:G	rs879639134	A	G	A	Hoxd9_MA0913.1	3	1	+	8.678133135028622	6.850514194533517	GCAATTAAAC
chr14	23096933	23096934	chr14:23096934:A:G	rs3759607	A	G	A	Hoxd9_MA0913.1	10	0	+	0	0	.
chr14	23640184	23640185	chr14:23640185:T:C	rs74036810	T	C	C	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr14	24142125	24142126	chr14:24142126:G:C	rs8006173	G	C	G	Hoxd9_MA0913.1	26	0	-	0	0	.
chr14	24362198	24362199	chr14:24362199:G:A	rs149981696	G	A	G	Hoxd9_MA0913.1	13	0	+	0	0	.
chr14	24365656	24365657	chr14:24365657:A:G	rs140733082	A	G	A	Hoxd9_MA0913.1	25	0	+	0	0	.
chr14	24465492	24465493	chr14:24465493:G:A	rs12886471	G	A	G	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr14	24806007	24806008	chr14:24806008:A:G	rs7156092	A	G	A	Hoxd9_MA0913.1	17	0	+	0	0	.
chr14	24846670	24846671	chr14:24846671:T:C	rs12880667	T	C	C	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr14	25010335	25010336	chr14:25010336:C:T	rs11850957	C	T	T	Hoxd9_MA0913.1	12	0	+	0	0	.
chr14	25035781	25035782	chr14:25035782:G:A	rs10141197	G	A	g	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr14	27703325	27703326	chr14:27703326:G:A	rs11625108	G	A	G	Hoxd9_MA0913.1	19	0	-	0	0	.
chr14	28057753	28057754	chr14:28057754:G:A	rs56034089	G	A	G	Hoxd9_MA0913.1	28	0	+	0	0	.
chr14	28368239	28368240	chr14:28368240:T:C	rs539853427	T	C	T	Hoxd9_MA0913.1	12	0	+	0	0	.
chr14	28581112	28581113	chr14:28581113:G:T	rs35608048	G	T	G	Hoxd9_MA0913.1	1	1	-	8.879672775420401	6.459854399395143	GCCATAAAAA
chr14	28599417	28599418	chr14:28599418:C:T	rs7153439	C	T	C	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr14	28629921	28629922	chr14:28629922:T:A	rs12433313	T	A	T	Hoxd9_MA0913.1	9	1	-	7.973723031895638	7.7299109947576845	GCAGTAAAAA
chr14	28742425	28742426	chr14:28742426:T:C	rs1955453	T	C	T	Hoxd9_MA0913.1	4	1	+	8.2283733949328	4.93623914315782	GCAATAAAGA
chr14	28757442	28757443	chr14:28757443:T:C	rs142719273	T	C	T	Hoxd9_MA0913.1	11	0	-	0	0	.
chr14	29829944	29829945	chr14:29829945:A:G	rs79371051	A	G	A	Hoxd9_MA0913.1	11	0	+	0	0	.
chr14	30002884	30002885	chr14:30002885:T:C	rs28401580	T	C	T	Hoxd9_MA0913.1	21	0	-	0	0	.
chr14	30194069	30194070	chr14:30194070:T:G	rs187671325	T	G	T	Hoxd9_MA0913.1	24	0	+	0	0	.
chr14	30394747	30394748	chr14:30394748:C:A	rs7156859	C	A	A	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr14	31366572	31366573	chr14:31366573:T:G	rs7149240	T	G	T	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr14	31752939	31752940	chr14:31752940:G:C	rs79758033	G	C	g	Hoxd9_MA0913.1	23	0	+	0	0	.
chr14	31930963	31930964	chr14:31930964:G:A	rs1278895	G	A	A	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr14	31992168	31992169	chr14:31992169:C:T	rs1958918	C	T	T	Hoxd9_MA0913.1	28	0	-	0	0	.
chr14	32019126	32019127	chr14:32019127:C:T	rs8019596	C	T	T	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr14	32319613	32319614	chr14:32319614:T:C	rs17091641	T	C	T	Hoxd9_MA0913.1	23	0	-	0	0	.
chr14	32409736	32409737	chr14:32409737:C:A	rs11627622	C	A	C	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr14	32454234	32454235	chr14:32454235:T:A	rs3784193	T	A	A	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr14	32509521	32509522	chr14:32509522:T:C	rs6571531	T	C	c	Hoxd9_MA0913.1	6	1	-	8.879672775420401	2.064252107641061	GCCATAAAAA
chr14	32784929	32784930	chr14:32784930:T:C	rs41535345	T	C	T	Hoxd9_MA0913.1	3	1	-	8.323343304007485	6.495724363512382	CCAATAAAAA
chr14	33446654	33446655	chr14:33446655:T:C	rs74042091	T	C	T	Hoxd9_MA0913.1	26	0	-	0	0	.
chr14	33534662	33534663	chr14:33534663:T:C	rs7156402	T	C	T	Hoxd9_MA0913.1	16	0	-	0	0	.
chr14	34040086	34040087	chr14:34040087:G:A	rs1680726	G	A	G	Hoxd9_MA0913.1	16	0	+	0	0	.
chr14	34085176	34085177	chr14:34085177:G:T	rs2163412	G	T	G	Hoxd9_MA0913.1	26	0	+	0	0	.
chr14	34089250	34089251	chr14:34089251:T:C	rs7145664	T	C	T	Hoxd9_MA0913.1	4	1	+	8.812437826870472	5.520303575095493	ACAATTAAAA
chr14	34340695	34340696	chr14:34340696:G:A	rs7153394	G	A	G	Hoxd9_MA0913.1	0	1	+	9.51635951314298	8.568625789732518	GCAATTAAAT
chr14	34516299	34516300	chr14:34516300:G:C	rs7766	G	C	G	Hoxd9_MA0913.1	14	0	+	0	0	.
chr14	34527605	34527606	chr14:34527606:A:G	rs28769357	A	G	A	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr14	35045249	35045250	chr14:35045250:G:C	rs60693825	G	C	G	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr14	36453932	36453933	chr14:36453933:G:A	rs960251	G	A	G	Hoxd9_MA0913.1	20	0	-	0	0	.
chr14	36574335	36574336	chr14:36574336:G:C	rs11620993	G	C	C	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr14	36668074	36668075	chr14:36668075:T:C	rs12893199	T	C	C	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr14	37233110	37233111	chr14:37233111:G:A	rs138252411	G	A	G	Hoxd9_MA0913.1	13	0	-	0	0	.
chr14	37262982	37262983	chr14:37262983:T:G	rs10138206	T	G	T	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr14	37306553	37306554	chr14:37306554:C:A	chr14:37306554:C:A	C	A	C	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr14	38352080	38352081	chr14:38352081:T:C	rs8005516	T	C	C	Hoxd9_MA0913.1	29	0	-	0	0	.
chr14	38505676	38505677	chr14:38505677:C:T	rs75219236	C	T	C	Hoxd9_MA0913.1	16	0	+	0	0	.
chr14	38549559	38549560	chr14:38549560:G:A	rs8015028	G	A	A	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr14	38701553	38701554	chr14:38701554:A:G	rs11848602	A	G	A	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr14	38701554	38701555	chr14:38701555:T:C	rs11844779	T	C	T	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr14	39217445	39217446	chr14:39217446:C:A	rs2117337	C	A	a	Hoxd9_MA0913.1	0	1	-	8.329997507299597	5.292854811346727	GTAATTAAAC
chr14	39372916	39372917	chr14:39372917:A:G	rs17109163	A	G	A	Hoxd9_MA0913.1	5	1	+	9.801341972390743	3.5796788194948737	GCAATAAAAA
chr14	39456967	39456968	chr14:39456968:A:G	rs28689476	A	G	A	Hoxd9_MA0913.1	3	1	+	8.32301137036169	6.4953924298665875	GCAATAAATA
chr14	39770625	39770626	chr14:39770626:A:G	rs4144389	A	G	A	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr14	39934003	39934004	chr14:39934004:G:A	rs73292776	G	A	G	Hoxd9_MA0913.1	11	0	+	0	0	.
chr14	40364972	40364973	chr14:40364973:C:T	rs872281	C	T	c	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr14	40600017	40600018	chr14:40600018:T:A	rs1959270	T	A	T	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr14	41017647	41017648	chr14:41017648:A:C	rs1002734	A	C	A	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr14	41017687	41017688	chr14:41017688:T:C	rs1947332	T	C	T	Hoxd9_MA0913.1	28	0	+	0	0	.
chr14	41116725	41116726	chr14:41116726:T:G	rs2415672	T	G	T	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr14	41285494	41285495	chr14:41285495:A:G	rs689509	A	G	A	Hoxd9_MA0913.1	27	0	-	0	0	.
chr14	41636190	41636191	chr14:41636191:C:G	rs17112148	C	G	C	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr14	41824578	41824579	chr14:41824579:G:A	rs1951877	G	A	G	Hoxd9_MA0913.1	11	0	-	0	0	.
chr14	42279217	42279218	chr14:42279218:A:G	rs56085603	A	G	A	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr14	42735471	42735472	chr14:42735472:G:A	rs1954355	G	A	G	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr14	42879965	42879966	chr14:42879966:C:T	rs28753778	C	T	T	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr14	43027707	43027708	chr14:43027708:T:C	rs181307582	T	C	T	Hoxd9_MA0913.1	10	0	-	0	0	.
chr14	43027721	43027722	chr14:43027722:C:T	rs114652161	C	T	C	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr14	43850149	43850150	chr14:43850150:G:A	rs1951551	G	A	A	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr14	44549516	44549517	chr14:44549517:G:T	rs17548372	G	T	G	Hoxd9_MA0913.1	26	0	-	0	0	.
chr14	45610679	45610680	chr14:45610680:A:G	rs10220442	A	G	a	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr14	45772585	45772586	chr14:45772586:T:C	rs11157457	T	C	T	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr14	46173768	46173769	chr14:46173769:A:C	rs72684673	A	C	A	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr14	46747232	46747233	chr14:46747233:G:A	rs76737104	G	A	g	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr14	46747262	46747263	chr14:46747263:T:C	rs17744004	T	C	T	Hoxd9_MA0913.1	16	0	+	0	0	.
chr14	47300841	47300842	chr14:47300842:C:A	rs17672024	C	A	C	Hoxd9_MA0913.1	11	0	-	0	0	.
chr14	47447170	47447171	chr14:47447171:T:G	rs10141117	T	G	T	Hoxd9_MA0913.1	14	0	+	0	0	.
chr14	47833451	47833452	chr14:47833452:C:T	rs1950757	C	T	T	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr14	47833486	47833487	chr14:47833487:A:C	rs1956326	A	C	C	Hoxd9_MA0913.1	26	0	+	0	0	.
chr14	48289380	48289381	chr14:48289381:A:G	rs1769513	A	G	G	Hoxd9_MA0913.1	18	0	-	0	0	.
chr14	48456218	48456219	chr14:48456219:G:C	rs72682096	G	C	G	Hoxd9_MA0913.1	24	0	-	0	0	.
chr14	48561781	48561782	chr14:48561782:C:G	rs10162311	C	G	G	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr14	48561789	48561790	chr14:48561790:T:A	rs10162487	T	A	T	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr14	49021322	49021323	chr14:49021323:T:G	rs1016624281	T	G	G	Hoxd9_MA0913.1	18	0	+	0	0	.
chr14	49593138	49593139	chr14:49593139:G:C	rs17774889	G	C	g	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr14	49951057	49951058	chr14:49951058:C:A	rs17121898	C	A	C	Hoxd9_MA0913.1	21	0	-	0	0	.
chr14	50005156	50005157	chr14:50005157:A:G	rs10873029	A	G	G	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr14	50062840	50062841	chr14:50062841:G:C	rs144380123	G	C	G	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr14	50062876	50062877	chr14:50062877:C:A	rs79584782	C	A	C	Hoxd9_MA0913.1	20	0	+	0	0	.
chr14	50083613	50083614	chr14:50083614:G:C	rs200221048	G	C	G	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr14	50233634	50233635	chr14:50233635:C:T	rs72681894	C	T	C	Hoxd9_MA0913.1	26	0	+	0	0	.
chr14	50282134	50282135	chr14:50282135:T:C	rs12889265	T	C	C	Hoxd9_MA0913.1	23	0	-	0	0	.
chr14	50396432	50396433	chr14:50396433:G:A	rs539462459	G	A	G	Hoxd9_MA0913.1	11	0	-	0	0	.
chr14	50668590	50668591	chr14:50668591:A:G	rs3015488	A	G	G	Hoxd9_MA0913.1	25	0	-	0	0	.
chr14	50668611	50668612	chr14:50668612:A:G	rs3015486	A	G	T	Hoxd9_MA0913.1	4	1	-	8.853608248980283	5.561473997205303	ACAATAAAAA
chr14	50794953	50794954	chr14:50794954:T:C	rs10137294	T	C	T	Hoxd9_MA0913.1	18	0	+	0	0	.
chr14	50945189	50945190	chr14:50945190:T:G	rs7159436	T	G	T	Hoxd9_MA0913.1	13	0	-	0	0	.
chr14	50958411	50958412	chr14:50958412:T:A	rs7146227	T	A	T	Hoxd9_MA0913.1	12	0	-	0	0	.
chr14	50968741	50968742	chr14:50968742:T:C	rs1002145	T	C	t	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr14	51062357	51062358	chr14:51062358:A:T	rs76764255	A	T	A	Hoxd9_MA0913.1	21	0	-	0	0	.
chr14	51079469	51079470	chr14:51079470:A:G	rs528502481	A	G	A	Hoxd9_MA0913.1	22	0	-	0	0	.
chr14	51082446	51082447	chr14:51082447:G:A	rs58066729	G	A	G	Hoxd9_MA0913.1	18	0	+	0	0	.
chr14	51096596	51096597	chr14:51096597:G:A	rs61987479	G	A	G	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr14	51119693	51119694	chr14:51119694:G:A	rs10498421	G	A	G	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr14	51180216	51180217	chr14:51180217:A:G	rs3007164	A	G	A	Hoxd9_MA0913.1	29	0	-	0	0	.
chr14	51182347	51182348	chr14:51182348:G:T	rs56026555	G	T	G	Hoxd9_MA0913.1	12	0	+	0	0	.
chr14	51182362	51182363	chr14:51182363:G:A	rs61985092	G	A	G	Hoxd9_MA0913.1	27	0	+	0	0	.
chr14	51317640	51317641	chr14:51317641:C:A	rs146090463	C	A	C	Hoxd9_MA0913.1	13	0	+	0	0	.
chr14	51382955	51382956	chr14:51382956:T:C	rs59458267	T	C	T	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr14	51394616	51394617	chr14:51394617:A:G	rs146747506	A	G	A	Hoxd9_MA0913.1	3	1	+	8.287725110553424	6.460106170058319	GTCATAAAAT
chr14	51448813	51448814	chr14:51448814:A:G	rs7150266	A	G	T	Hoxd9_MA0913.1	29	0	+	0	0	.
chr14	51534399	51534400	chr14:51534400:A:C	rs17124124	A	C	A	Hoxd9_MA0913.1	19	0	-	0	0	.
chr14	51581674	51581675	chr14:51581675:G:A	rs4898700	G	A	G	Hoxd9_MA0913.1	21	0	+	0	0	.
chr14	51789443	51789444	chr14:51789444:C:A	rs35970981	C	A	C	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr14	51789532	51789533	chr14:51789533:A:G	rs8017505	A	G	A	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr14	51867833	51867834	chr14:51867834:T:A	rs34867128	T	A	T	Hoxd9_MA0913.1	23	0	+	0	0	.
chr14	51905423	51905424	chr14:51905424:A:C	rs4901173	A	C	A	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr14	52130231	52130232	chr14:52130232:C:G	rs7149418	C	G	C	Hoxd9_MA0913.1	20	0	+	0	0	.
chr14	52160853	52160854	chr14:52160854:C:T	rs8016909	C	T	C	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr14	52175768	52175769	chr14:52175769:A:T	rs4901226	A	T	T	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr14	52189679	52189680	chr14:52189680:G:C	rs10498443	G	C	g	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr14	52650736	52650737	chr14:52650737:C:G	rs7157749	C	G	C	Hoxd9_MA0913.1	15	0	-	0	0	.
chr14	52691607	52691608	chr14:52691608:C:T	rs2357804	C	T	C	Hoxd9_MA0913.1	27	0	+	0	0	.
chr14	52734788	52734789	chr14:52734789:T:C	rs2065052	T	C	C	Hoxd9_MA0913.1	21	0	+	0	0	.
chr14	53111163	53111164	chr14:53111164:A:G	rs150551625	A	G	A	Hoxd9_MA0913.1	9	1	+	8.2283733949328	6.761880054163308	GCAATAAAGA
chr14	53277698	53277699	chr14:53277699:T:A	rs10134633	T	A	A	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr14	53285974	53285975	chr14:53285975:A:G	rs78686821	A	G	G	Hoxd9_MA0913.1	8	1	+	8.334848631621252	6.761880054163308	GCAATAAAAG
chr14	53304968	53304969	chr14:53304969:C:T	rs111481572	C	T	C	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr14	53367338	53367339	chr14:53367339:T:C	chr14:53367339:T:C	T	C	T	Hoxd9_MA0913.1	13	0	-	0	0	.
chr14	53492083	53492084	chr14:53492084:T:G	rs77867503	T	G	T	Hoxd9_MA0913.1	29	0	+	0	0	.
chr14	53510345	53510346	chr14:53510346:G:A	rs1959832	G	A	G	Hoxd9_MA0913.1	9	1	+	7.4131794346509094	8.879672775420401	GCCATAAAAG
chr14	53523509	53523510	chr14:53523510:A:G	rs61987599	A	G	A	Hoxd9_MA0913.1	3	1	+	8.812437826870472	6.984818886375368	ACAATTAAAA
chr14	53788791	53788792	chr14:53788792:A:G	rs72678242	A	G	A	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr14	53885178	53885179	chr14:53885179:A:G	rs731901	A	G	A	Hoxd9_MA0913.1	20	0	+	0	0	.
chr14	53894620	53894621	chr14:53894621:C:T	rs17127044	C	T	C	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr14	53944977	53944978	chr14:53944978:G:A	rs11157993	G	A	G	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr14	53952833	53952834	chr14:53952834:T:A	rs59035991	T	A	T	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr14	53998660	53998661	chr14:53998661:T:C	rs12892545	T	C	C	Hoxd9_MA0913.1	4	1	+	9.51635951314298	6.224225261367999	GCAATTAAAT
chr14	54026944	54026945	chr14:54026945:T:A	rs144548873	T	A	T	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr14	54505328	54505329	chr14:54505329:T:C	rs74951350	T	C	C	Hoxd9_MA0913.1	12	0	+	0	0	.
chr14	54529911	54529912	chr14:54529912:G:A	rs17127622	G	A	G	Hoxd9_MA0913.1	29	0	-	0	0	.
chr14	54695509	54695510	chr14:54695510:T:C	rs74601635	T	C	T	Hoxd9_MA0913.1	3	1	-	8.531537147691377	6.703918207196272	GTCATAAAAA
chr14	54696539	54696540	chr14:54696540:C:T	rs11622319	C	T	C	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr14	54698553	54698554	chr14:54698554:A:T	rs77974842	A	T	A	Hoxd9_MA0913.1	2	1	+	9.168223885413955	2.717879853563173	GTAATTAAAT
chr14	54881108	54881109	chr14:54881109:A:G	rs7155501	A	G	G	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr14	54881115	54881116	chr14:54881116:C:T	rs118144291	C	T	C	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr14	55330163	55330164	chr14:55330164:A:C	rs541219837	A	C	A	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr14	55451410	55451411	chr14:55451411:C:T	rs17128493	C	T	C	Hoxd9_MA0913.1	28	0	+	0	0	.
chr14	55512819	55512820	chr14:55512820:A:T	rs1009714	A	T	A	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr14	55813627	55813628	chr14:55813628:A:G	rs7155999	A	G	A	Hoxd9_MA0913.1	19	0	-	0	0	.
chr14	55814582	55814583	chr14:55814583:C:G	rs35177157	C	G	C	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr14	56088602	56088603	chr14:56088603:A:G	rs57701314	A	G	G	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr14	56248005	56248006	chr14:56248006:G:C	rs189020737	G	C	G	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr14	56487294	56487295	chr14:56487295:A:C	rs1189275	A	C	A	Hoxd9_MA0913.1	2	1	+	7.801678332738202	6.88000913576786	GCAATAAACA
chr14	56487867	56487868	chr14:56487868:C:T	rs1890906	C	T	T	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr14	56872258	56872259	chr14:56872259:T:C	rs850264	T	C	C	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr14	57167982	57167983	chr14:57167983:T:A	rs1892221	T	A	A	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr14	57390134	57390135	chr14:57390135:C:T	rs114583817	C	T	C	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr14	57498114	57498115	chr14:57498115:C:G	rs61995062	C	G	C	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr14	57884341	57884342	chr14:57884342:G:C	rs1335519	G	C	G	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr14	57957525	57957526	chr14:57957526:C:T	rs7143437	C	T	T	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr14	58104555	58104556	chr14:58104556:G:A	rs910880	G	A	A	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr14	58240122	58240123	chr14:58240123:A:G	rs79662851	A	G	A	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr14	58408700	58408701	chr14:58408701:T:C	rs778534183	T	C	T	Hoxd9_MA0913.1	23	0	+	0	0	.
chr14	58639858	58639859	chr14:58639859:T:G	rs896470806	T	G	T	Hoxd9_MA0913.1	19	0	-	0	0	.
chr14	58657061	58657062	chr14:58657062:A:G	rs698020	A	G	A	Hoxd9_MA0913.1	29	0	+	0	0	.
chr14	58741718	58741719	chr14:58741719:G:A	rs8020436	G	A	G	Hoxd9_MA0913.1	19	0	-	0	0	.
chr14	58747648	58747649	chr14:58747649:C:T	rs311867	C	T	T	Hoxd9_MA0913.1	29	0	-	0	0	.
chr14	58883225	58883226	chr14:58883226:C:T	rs12589573	C	T	C	Hoxd9_MA0913.1	25	0	-	0	0	.
chr14	58883250	58883251	chr14:58883251:C:T	rs12586398	C	T	C	Hoxd9_MA0913.1	0	1	-	8.329997507299597	7.382263783889136	GTAATTAAAC
chr14	58926524	58926525	chr14:58926525:T:G	rs6573228	T	G	T	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr14	58953427	58953428	chr14:58953428:A:G	rs9972092	A	G	A	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr14	59090889	59090890	chr14:59090890:G:T	rs34089578	G	T	G	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr14	59117119	59117120	chr14:59117120:T:G	rs73311063	T	G	T	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr14	59293259	59293260	chr14:59293260:T:C	rs4901914	T	C	T	Hoxd9_MA0913.1	3	1	-	9.209394307523764	7.381775367028661	GTAATAAAAT
chr14	59337778	59337779	chr14:59337779:C:T	rs10483715	C	T	C	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr14	59377864	59377865	chr14:59377865:A:G	rs10146474	A	G	G	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr14	59377892	59377893	chr14:59377893:C:T	rs1253194	C	T	C	Hoxd9_MA0913.1	14	0	+	0	0	.
chr14	59510939	59510940	chr14:59510940:T:A	rs4901933	T	A	A	Hoxd9_MA0913.1	17	0	+	0	0	.
chr14	59537556	59537557	chr14:59537557:C:T	rs1956359	C	T	C	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr14	59691446	59691447	chr14:59691447:C:A	rs1957986	C	A	A	Hoxd9_MA0913.1	10	0	+	0	0	.
chr14	59979343	59979344	chr14:59979344:T:C	rs219331	T	C	C	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr14	60151846	60151847	chr14:60151847:G:A	rs929487968	G	A	G	Hoxd9_MA0913.1	25	0	+	0	0	.
chr14	60185214	60185215	chr14:60185215:C:A	rs216524	C	A	A	Hoxd9_MA0913.1	24	0	+	0	0	.
chr14	60558898	60558899	chr14:60558899:A:G	rs4442732	A	G	A	Hoxd9_MA0913.1	26	0	+	0	0	.
chr14	60658986	60658987	chr14:60658987:A:T	rs558888905	A	T	A	Hoxd9_MA0913.1	2	1	+	9.453206344661718	3.002862312810936	GTAATAAAAA
chr14	60759708	60759709	chr14:60759709:T:C	rs4902001	T	C	T	Hoxd9_MA0913.1	5	1	-	8.32301137036169	2.1013482174658225	GCAATAAATA
chr14	61234924	61234925	chr14:61234925:G:A	rs868826	G	A	A	Hoxd9_MA0913.1	13	0	-	0	0	.
chr14	61269701	61269702	chr14:61269702:G:A	rs9788493	G	A	A	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr14	61269707	61269708	chr14:61269708:A:G	rs369925969	A	G	A	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr14	61269747	61269748	chr14:61269748:T:C	rs117378915	T	C	T	Hoxd9_MA0913.1	27	0	+	0	0	.
chr14	61471436	61471437	chr14:61471437:C:T	rs4899049	C	T	C	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr14	61503154	61503155	chr14:61503155:G:C	rs75238045	G	C	G	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr14	61541428	61541429	chr14:61541429:T:A	rs2246700	T	A	A	Hoxd9_MA0913.1	5	1	+	8.594690316172638	8.635860738282448	GCCATTAAAT
chr14	61558002	61558003	chr14:61558003:A:G	rs80038179	A	G	A	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr14	61670943	61670944	chr14:61670944:G:A	rs2256205	G	A	G	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr14	61696501	61696502	chr14:61696502:T:G	rs76237089	T	G	T	Hoxd9_MA0913.1	12	0	-	0	0	.
chr14	61860579	61860580	chr14:61860580:G:A	rs17099284	G	A	A	Hoxd9_MA0913.1	15	0	-	0	0	.
chr14	61861905	61861906	chr14:61861906:G:T	rs73256480	G	T	T	Hoxd9_MA0913.1	16	0	-	0	0	.
chr14	62655369	62655370	chr14:62655370:T:G	rs945914281	T	G	T	Hoxd9_MA0913.1	11	0	-	0	0	.
chr14	62692016	62692017	chr14:62692017:A:G	rs11622348	A	G	A	Hoxd9_MA0913.1	20	0	+	0	0	.
chr14	63275179	63275180	chr14:63275180:G:A	rs7152391	G	A	G	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr14	63436837	63436838	chr14:63436838:T:C	rs11846721	T	C	C	Hoxd9_MA0913.1	3	1	-	9.55752993525279	7.7299109947576845	GCAATAAAAT
chr14	63642101	63642102	chr14:63642102:C:T	rs531355613	C	T	C	Hoxd9_MA0913.1	0	1	-	7.75646393805828	6.808730214647819	GCCATTAAAC
chr14	63769284	63769285	chr14:63769285:C:T	rs34817779	C	T	T	Hoxd9_MA0913.1	14	0	+	0	0	.
chr14	63950953	63950954	chr14:63950954:C:G	rs945027	C	G	G	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr14	64040322	64040323	chr14:64040323:T:G	rs2357342	T	G	T	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr14	64495576	64495577	chr14:64495577:A:G	rs28730549	A	G	G	Hoxd9_MA0913.1	11	0	+	0	0	.
chr14	64766463	64766464	chr14:64766464:A:G	rs574982657	A	G	A	Hoxd9_MA0913.1	29	0	+	0	0	.
chr14	65055840	65055841	chr14:65055841:A:C	rs76233722	A	C	A	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr14	65770049	65770050	chr14:65770050:G:A	rs75657340	G	A	G	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr14	66038943	66038944	chr14:66038944:G:A	rs181780916	G	A	G	Hoxd9_MA0913.1	24	0	-	0	0	.
chr14	66039227	66039228	chr14:66039228:G:C	rs8016135	G	C	G	Hoxd9_MA0913.1	23	0	+	0	0	.
chr14	66056662	66056663	chr14:66056663:T:C	rs74056920	T	C	T	Hoxd9_MA0913.1	26	0	-	0	0	.
chr14	66524820	66524821	chr14:66524821:C:A	rs28659174	C	A	A	Hoxd9_MA0913.1	23	0	-	0	0	.
chr14	67471558	67471559	chr14:67471559:A:G	rs1316032	A	G	A	Hoxd9_MA0913.1	0	1	+	8.60979621184233	9.55752993525279	ACAATAAAAT
chr14	67623105	67623106	chr14:67623106:T:C	rs6573788	T	C	C	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr14	67715603	67715604	chr14:67715604:T:C	rs2320028	T	C	C	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr14	67897441	67897442	chr14:67897442:A:G	rs7150903	A	G	A	Hoxd9_MA0913.1	11	0	+	0	0	.
chr14	67942506	67942507	chr14:67942507:G:A	rs60381652	G	A	G	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr14	67990694	67990695	chr14:67990695:G:T	rs10140282	G	T	T	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr14	67991063	67991064	chr14:67991064:A:G	rs17104857	A	G	A	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr14	68166108	68166109	chr14:68166109:A:G	rs1958116	A	G	A	Hoxd9_MA0913.1	27	0	-	0	0	.
chr14	68195478	68195479	chr14:68195479:A:G	rs6573819	A	G	A	Hoxd9_MA0913.1	0	1	+	8.812437826870472	9.760171550280933	ACAATTAAAA
chr14	68195495	68195496	chr14:68195496:C:T	rs6573820	C	T	T	Hoxd9_MA0913.1	17	0	+	0	0	.
chr14	68196768	68196769	chr14:68196769:G:T	rs4584756	G	T	A	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr14	68283209	68283210	chr14:68283210:G:A	rs3784099	G	A	A	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr14	68307613	68307614	chr14:68307614:T:A	rs3784105	T	A	T	Hoxd9_MA0913.1	6	1	-	8.838502353310592	6.415182405776607	GCCATTAAAA
chr14	68563934	68563935	chr14:68563935:C:A	rs17105852	C	A	C	Hoxd9_MA0913.1	20	0	+	0	0	.
chr14	68703996	68703997	chr14:68703997:T:C	rs35545479	T	C	T	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr14	68732461	68732462	chr14:68732462:A:G	rs17106229	A	G	A	Hoxd9_MA0913.1	23	0	+	0	0	.
chr14	68857701	68857702	chr14:68857702:C:T	rs28583550	C	T	c	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr14	68857728	68857729	chr14:68857729:A:C	rs372896	A	C	N	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr14	68911578	68911579	chr14:68911579:G:T	rs2070279	G	T	T	Hoxd9_MA0913.1	27	0	+	0	0	.
chr14	69089223	69089224	chr14:69089224:T:C	rs11158787	T	C	T	Hoxd9_MA0913.1	3	1	-	8.853608248980283	7.025989308485178	ACAATAAAAA
chr14	69284812	69284813	chr14:69284813:T:C	rs7141942	T	C	C	Hoxd9_MA0913.1	23	0	+	0	0	.
chr14	69518780	69518781	chr14:69518781:G:A	rs4899298	G	A	G	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr14	69599196	69599197	chr14:69599197:C:T	rs75390195	C	T	C	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr14	69654555	69654556	chr14:69654556:A:G	rs79365473	A	G	A	Hoxd9_MA0913.1	14	0	-	0	0	.
chr14	69849747	69849748	chr14:69849748:C:T	rs11625824	C	T	T	Hoxd9_MA0913.1	28	0	+	0	0	.
chr14	70317004	70317005	chr14:70317005:C:T	rs8020966	C	T	C	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr14	70982876	70982877	chr14:70982877:C:T	rs34731365	C	T	C	Hoxd9_MA0913.1	16	0	+	0	0	.
chr14	71021936	71021937	chr14:71021937:G:A	rs7153237	G	A	A	Hoxd9_MA0913.1	1	1	-	9.801341972390743	9.453206344661718	GCAATAAAAA
chr14	71060505	71060506	chr14:71060506:A:G	rs7152845	A	G	G	Hoxd9_MA0913.1	9	1	-	8.635860738282448	7.7976343601680895	GCCATAAAAT
chr14	71166429	71166430	chr14:71166430:C:T	chr14:71166430:C:T	C	T	C	Hoxd9_MA0913.1	22	0	-	0	0	.
chr14	71261196	71261197	chr14:71261197:G:A	rs61989252	G	A	g	Hoxd9_MA0913.1	1	1	-	8.568625789732518	8.220490162003495	ACAATTAAAT
chr14	71521539	71521540	chr14:71521540:A:G	rs79051611	A	G	A	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr14	71556771	71556772	chr14:71556772:T:C	rs7142343	T	C	C	Hoxd9_MA0913.1	8	1	-	8.371167929409406	6.798199351951464	GTAATAAAAC
chr14	72545176	72545177	chr14:72545177:A:G	rs2239222	A	G	G	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr14	72874946	72874947	chr14:72874947:T:G	rs35020117	T	G	G	Hoxd9_MA0913.1	9	1	-	8.282172881897674	7.200134466645363	CCAATTAAAA
chr14	72874957	72874958	chr14:72874958:C:G	rs112598335	C	G	C	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr14	72955550	72955551	chr14:72955551:C:G	rs3815460	C	G	C	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr14	73098442	73098443	chr14:73098443:T:G	rs17182125	T	G	T	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr14	73258341	73258342	chr14:73258342:T:C	rs12590918	T	C	T	Hoxd9_MA0913.1	26	0	-	0	0	.
chr14	73295408	73295409	chr14:73295409:C:A	rs74061095	C	A	C	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr14	73344840	73344841	chr14:73344841:A:C	rs17492268	A	C	A	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr14	73675718	73675719	chr14:73675719:A:G	rs918045397	A	G	A	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr14	73825424	73825425	chr14:73825425:C:T	rs12887033	C	T	C	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr14	73888581	73888582	chr14:73888582:T:C	rs72627118	T	C	T	Hoxd9_MA0913.1	9	1	-	8.812437826870472	7.34594448610098	ACAATTAAAA
chr14	73903251	73903252	chr14:73903252:C:G	rs7157715	C	G	C	Hoxd9_MA0913.1	0	1	-	9.453206344661718	7.97520767627846	GTAATAAAAA
chr14	74108210	74108211	chr14:74108211:C:A	chr14:74108211:C:A	C	A	C	Hoxd9_MA0913.1	10	0	-	0	0	.
chr14	74698613	74698614	chr14:74698614:A:G	rs10138739	A	G	A	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr14	74879747	74879748	chr14:74879748:A:G	rs7146160	A	G	A	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr14	75389918	75389919	chr14:75389919:G:A	rs59323260	G	A	A	Hoxd9_MA0913.1	13	0	+	0	0	.
chr14	75558547	75558548	chr14:75558548:G:A	rs79598937	G	A	G	Hoxd9_MA0913.1	20	0	+	0	0	.
chr14	75588341	75588342	chr14:75588342:A:G	rs1288203768	A	G	A	Hoxd9_MA0913.1	27	0	-	0	0	.
chr14	75822521	75822522	chr14:75822522:A:G	rs180718271	A	G	A	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr14	76041115	76041116	chr14:76041116:A:G	rs17183866	A	G	A	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr14	76090170	76090171	chr14:76090171:C:T	rs6574268	C	T	T	Hoxd9_MA0913.1	19	0	-	0	0	.
chr14	76167466	76167467	chr14:76167467:C:T	rs11624689	C	T	C	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr14	76390035	76390036	chr14:76390036:G:A	rs28533060	G	A	G	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr14	76715088	76715089	chr14:76715089:T:G	rs11159226	T	G	T	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr14	76721377	76721378	chr14:76721378:A:G	rs61991183	A	G	A	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr14	76762686	76762687	chr14:76762687:G:C	rs113104711	G	C	G	Hoxd9_MA0913.1	1	1	-	8.60979621184233	5.517231199557616	ACAATAAAAT
chr14	77314075	77314076	chr14:77314076:G:A	rs75264088	G	A	G	Hoxd9_MA0913.1	11	0	-	0	0	.
chr14	77470625	77470626	chr14:77470626:T:G	rs17751412	T	G	T	Hoxd9_MA0913.1	22	0	-	0	0	.
chr14	77663460	77663461	chr14:77663461:G:C	rs8019042	G	C	G	Hoxd9_MA0913.1	18	0	-	0	0	.
chr14	77663490	77663491	chr14:77663491:C:T	rs8018802	C	T	C	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr14	77663496	77663497	chr14:77663497:T:G	rs28541608	T	G	T	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr14	77674951	77674952	chr14:77674952:C:A	rs13379065	C	A	C	Hoxd9_MA0913.1	21	0	+	0	0	.
chr14	77917682	77917683	chr14:77917683:T:C	rs4899681	T	C	C	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr14	77985320	77985321	chr14:77985321:G:A	rs184163567	G	A	G	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr14	77985866	77985867	chr14:77985867:T:C	rs58062989	T	C	T	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr14	78112705	78112706	chr14:78112706:A:G	rs177159	A	G	G	Hoxd9_MA0913.1	23	0	-	0	0	.
chr14	78239272	78239273	chr14:78239273:G:A	rs34691573	G	A	G	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr14	78359265	78359266	chr14:78359266:C:T	rs111329320	C	T	C	Hoxd9_MA0913.1	26	0	-	0	0	.
chr14	79045019	79045020	chr14:79045020:G:A	rs2062741	G	A	G	Hoxd9_MA0913.1	15	0	+	0	0	.
chr14	79418436	79418437	chr14:79418437:C:G	rs2574751	C	G	G	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr14	79575205	79575206	chr14:79575206:T:C	rs145214672	T	C	T	Hoxd9_MA0913.1	16	0	+	0	0	.
chr14	79582918	79582919	chr14:79582919:G:A	rs7153625	G	A	A	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr14	79691207	79691208	chr14:79691208:G:T	rs193063515	G	T	G	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr14	80102303	80102304	chr14:80102304:C:A	rs17176050	C	A	C	Hoxd9_MA0913.1	22	0	-	0	0	.
chr14	80165093	80165094	chr14:80165094:A:G	rs170407	A	G	G	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr14	80987517	80987518	chr14:80987518:A:G	rs72693081	A	G	A	Hoxd9_MA0913.1	17	0	-	0	0	.
chr14	81312299	81312300	chr14:81312300:G:A	rs6574644	G	A	G	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr14	81331995	81331996	chr14:81331996:C:T	rs61978922	C	T	C	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr14	81536731	81536732	chr14:81536732:G:A	rs12185025	G	A	G	Hoxd9_MA0913.1	0	1	+	7.760507910628393	6.812774187217931	GCAATTAACA
chr14	81588043	81588044	chr14:81588044:G:C	rs7145816	G	C	G	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr14	82104611	82104612	chr14:82104612:A:G	rs11626408	A	G	A	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr14	82296006	82296007	chr14:82296007:C:A	rs12884101	C	A	C	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr14	82725382	82725383	chr14:82725383:T:C	rs73343647	T	C	T	Hoxd9_MA0913.1	13	0	+	0	0	.
chr14	83017718	83017719	chr14:83017719:T:A	rs58739480	T	A	T	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr14	83137590	83137591	chr14:83137591:A:G	rs17693506	A	G	A	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr14	83694114	83694115	chr14:83694115:G:A	rs1958438	G	A	A	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr14	83713680	83713681	chr14:83713681:A:G	rs10147226	A	G	a	Hoxd9_MA0913.1	4	1	-	9.209394307523764	5.917260055748785	GTAATAAAAT
chr14	84239517	84239518	chr14:84239518:G:A	rs1462335	G	A	G	Hoxd9_MA0913.1	25	0	-	0	0	.
chr14	84343771	84343772	chr14:84343772:A:G	rs370020745	A	G	A	Hoxd9_MA0913.1	23	0	-	0	0	.
chr14	84404676	84404677	chr14:84404677:T:A	rs7147801	T	A	T	Hoxd9_MA0913.1	18	0	+	0	0	.
chr14	84670991	84670992	chr14:84670992:T:C	rs1564525	T	C	t	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr14	85241571	85241572	chr14:85241572:A:G	rs7158899	A	G	A	Hoxd9_MA0913.1	16	0	-	0	0	.
chr14	85241579	85241580	chr14:85241580:T:C	rs1667504	T	C	C	Hoxd9_MA0913.1	8	1	-	8.293678209511443	6.720709632053499	GCAATTAAAG
chr14	85390451	85390452	chr14:85390452:A:G	rs17121075	A	G	G	Hoxd9_MA0913.1	12	0	-	0	0	.
chr14	85399074	85399075	chr14:85399075:A:C	rs10130907	A	C	C	Hoxd9_MA0913.1	16	0	-	0	0	.
chr14	85443691	85443692	chr14:85443692:A:G	rs1289415	A	G	G	Hoxd9_MA0913.1	10	0	+	0	0	.
chr14	85471107	85471108	chr14:85471108:G:A	rs7154389	G	A	A	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr14	85536817	85536818	chr14:85536818:G:A	rs3742482	G	A	G	Hoxd9_MA0913.1	25	0	+	0	0	.
chr14	86015874	86015875	chr14:86015875:A:G	rs1959457	A	G	A	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr14	86685076	86685077	chr14:86685077:A:G	rs66526152	A	G	G	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr14	86943514	86943515	chr14:86943515:T:C	rs61979772	T	C	T	Hoxd9_MA0913.1	10	0	+	0	0	.
chr14	87899283	87899284	chr14:87899284:G:A	rs11851156	G	A	G	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr14	88006250	88006251	chr14:88006251:C:T	rs8005161	C	T	C	Hoxd9_MA0913.1	26	0	+	0	0	.
chr14	88194709	88194710	chr14:88194710:T:C	rs17124236	T	C	T	Hoxd9_MA0913.1	7	1	-	8.187202972822991	1.3480584954686474	GCAATTAAGA
chr14	88249846	88249847	chr14:88249847:A:C	rs7160546	A	C	A	Hoxd9_MA0913.1	22	0	-	0	0	.
chr14	88346282	88346283	chr14:88346283:G:C	rs114070082	G	C	G	Hoxd9_MA0913.1	18	0	+	0	0	.
chr14	88455371	88455372	chr14:88455372:G:A	rs845757	G	A	G	Hoxd9_MA0913.1	26	0	-	0	0	.
chr14	89041270	89041271	chr14:89041271:G:T	chr14:89041271:G:T	G	T	G	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr14	89206907	89206908	chr14:89206908:T:A	rs997897	T	A	T	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr14	89313129	89313130	chr14:89313130:G:A	rs748576690	G	A	G	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr14	89648925	89648926	chr14:89648926:G:A	rs2761358	G	A	G	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr14	89810377	89810378	chr14:89810378:T:C	rs1111761	T	C	t	Hoxd9_MA0913.1	28	0	-	0	0	.
chr14	89922627	89922628	chr14:89922628:G:T	rs942189	G	T	T	Hoxd9_MA0913.1	17	0	+	0	0	.
chr14	89922635	89922636	chr14:89922636:T:C	rs111232232	T	C	T	Hoxd9_MA0913.1	25	0	+	0	0	.
chr14	89938200	89938201	chr14:89938201:G:A	rs77461748	G	A	G	Hoxd9_MA0913.1	12	0	+	0	0	.
chr14	90088413	90088414	chr14:90088414:C:A	rs1023603351	C	A	C	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr14	90093074	90093075	chr14:90093075:G:A	rs2176076	G	A	G	Hoxd9_MA0913.1	12	0	+	0	0	.
chr14	90248669	90248670	chr14:90248670:C:T	rs11622257	C	T	C	Hoxd9_MA0913.1	10	0	+	0	0	.
chr14	90248680	90248681	chr14:90248681:A:G	rs7147809	A	G	A	Hoxd9_MA0913.1	21	0	+	0	0	.
chr14	90457404	90457405	chr14:90457405:G:A	rs1955914	G	A	G	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr14	90665903	90665904	chr14:90665904:T:C	rs115250645	T	C	T	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr14	90693157	90693158	chr14:90693158:T:C	rs34328807	T	C	T	Hoxd9_MA0913.1	15	0	+	0	0	.
chr14	90705067	90705068	chr14:90705068:C:T	rs1742093	C	T	G	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr14	90780046	90780047	chr14:90780047:C:T	rs17127005	C	T	C	Hoxd9_MA0913.1	0	1	-	9.412035922551908	8.464302199141448	GTAATTAAAA
chr14	91062632	91062633	chr14:91062633:A:C	rs13379045	A	C	C	Hoxd9_MA0913.1	2	1	+	7.932552609785828	7.010883412815486	GCAGTTAAAA
chr14	91349865	91349866	chr14:91349866:A:G	rs80088803	A	G	A	Hoxd9_MA0913.1	0	1	+	8.812437826870472	9.760171550280933	ACAATTAAAA
chr14	91371178	91371179	chr14:91371179:T:C	rs114155417	T	C	T	Hoxd9_MA0913.1	22	0	-	0	0	.
chr14	91620368	91620369	chr14:91620369:A:G	rs1298989	A	G	A	Hoxd9_MA0913.1	29	0	+	0	0	.
chr14	91998920	91998921	chr14:91998921:A:G	rs10144835	A	G	G	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr14	92036140	92036141	chr14:92036141:T:G	rs7151444	T	G	G	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr14	92040352	92040353	chr14:92040353:G:A	rs1955684	G	A	G	Hoxd9_MA0913.1	12	0	-	0	0	.
chr14	92105884	92105885	chr14:92105885:T:C	rs1022913245	T	C	T	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr14	92534818	92534819	chr14:92534819:G:A	rs112484025	G	A	G	Hoxd9_MA0913.1	24	0	-	0	0	.
chr14	92542740	92542741	chr14:92542741:G:A	rs8022749	G	A	A	Hoxd9_MA0913.1	13	0	+	0	0	.
chr14	92720021	92720022	chr14:92720022:A:G	rs79926401	A	G	c	Hoxd9_MA0913.1	20	0	+	0	0	.
chr14	92800234	92800235	chr14:92800235:A:C	rs11847677	A	C	A	Hoxd9_MA0913.1	6	1	+	7.943390935685037	3.4688140730168318	GCAATTAAGT
chr14	93031803	93031804	chr14:93031804:T:C	rs1740696	T	C	T	Hoxd9_MA0913.1	25	0	+	0	0	.
chr14	93073523	93073524	chr14:93073524:G:T	rs77296296	G	T	G	Hoxd9_MA0913.1	0	1	+	8.594690316172638	5.5575476202197684	GCCATTAAAT
chr14	93333829	93333830	chr14:93333830:T:C	rs7155081	T	C	T	Hoxd9_MA0913.1	24	0	-	0	0	.
chr14	93337235	93337236	chr14:93337236:A:G	rs77458550	A	G	G	Hoxd9_MA0913.1	26	0	+	0	0	.
chr14	93525291	93525292	chr14:93525292:A:G	rs28608173	A	G	A	Hoxd9_MA0913.1	3	1	+	8.853608248980283	7.025989308485178	ACAATAAAAA
chr14	93963404	93963405	chr14:93963405:A:G	rs4905121	A	G	G	Hoxd9_MA0913.1	22	0	-	0	0	.
chr14	94049064	94049065	chr14:94049065:C:T	rs112083293	C	T	C	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr14	94100954	94100955	chr14:94100955:A:G	rs143789009	A	G	A	Hoxd9_MA0913.1	14	0	+	0	0	.
chr14	94172072	94172073	chr14:94172073:A:T	rs537246777	A	T	A	Hoxd9_MA0913.1	11	0	+	0	0	.
chr14	94181106	94181107	chr14:94181107:T:A	rs76951852	T	A	T	Hoxd9_MA0913.1	23	0	-	0	0	.
chr14	94386458	94386459	chr14:94386459:T:C	rs75285293	T	C	T	Hoxd9_MA0913.1	18	0	+	0	0	.
chr14	94646075	94646076	chr14:94646076:A:G	rs10143303	A	G	G	Hoxd9_MA0913.1	22	0	+	0	0	.
chr14	94678187	94678188	chr14:94678188:C:T	rs72696865	C	T	C	Hoxd9_MA0913.1	18	0	-	0	0	.
chr14	94772038	94772039	chr14:94772039:C:T	rs4900248	C	T	T	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr14	94812561	94812562	chr14:94812562:G:A	rs10139313	G	A	G	Hoxd9_MA0913.1	19	0	+	0	0	.
chr14	94894728	94894729	chr14:94894729:C:A	rs12435646	C	A	C	Hoxd9_MA0913.1	20	0	+	0	0	.
chr14	95155424	95155425	chr14:95155425:T:C	rs112438149	T	C	T	Hoxd9_MA0913.1	27	0	+	0	0	.
chr14	95354526	95354527	chr14:95354527:T:G	rs7150222	T	G	G	Hoxd9_MA0913.1	28	0	+	0	0	.
chr14	95402772	95402773	chr14:95402773:G:A	rs72692728	G	A	G	Hoxd9_MA0913.1	23	0	+	0	0	.
chr14	95452590	95452591	chr14:95452591:G:T	rs4905323	G	T	T	Hoxd9_MA0913.1	29	0	-	0	0	.
chr14	95477210	95477211	chr14:95477211:T:C	rs8020368	T	C	C	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr14	95715022	95715023	chr14:95715023:A:T	rs1957937	A	T	A	Hoxd9_MA0913.1	22	0	+	0	0	.
chr14	95774388	95774389	chr14:95774389:C:T	rs77539504	C	T	C	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr14	96070252	96070253	chr14:96070253:C:T	rs11160307	C	T	C	Hoxd9_MA0913.1	29	0	+	0	0	.
chr14	96072589	96072590	chr14:96072590:T:C	rs8010556	T	C	T	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr14	96169261	96169262	chr14:96169262:T:C	rs10133743	T	C	C	Hoxd9_MA0913.1	3	1	-	8.293678209511443	6.466059269016337	GCAATTAAAG
chr14	96170675	96170676	chr14:96170676:G:A	rs118079766	G	A	G	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr14	96268116	96268117	chr14:96268117:T:C	rs115190165	T	C	T	Hoxd9_MA0913.1	13	0	-	0	0	.
chr14	96268129	96268130	chr14:96268130:C:T	rs55682545	C	T	C	Hoxd9_MA0913.1	0	1	-	7.83890107168488	6.89116734827442	GCGATTAAAT
chr14	96300105	96300106	chr14:96300106:A:G	rs1280496	A	G	G	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr14	96416094	96416095	chr14:96416095:G:T	rs9671929	G	T	G	Hoxd9_MA0913.1	13	0	+	0	0	.
chr14	96741807	96741808	chr14:96741808:C:T	rs10146854	C	T	C	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr14	96745713	96745714	chr14:96745714:T:C	rs12184956	T	C	T	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr14	96745743	96745744	chr14:96745744:C:T	rs77785455	C	T	C	Hoxd9_MA0913.1	15	0	+	0	0	.
chr14	96745789	96745790	chr14:96745790:C:T	rs75734259	C	T	C	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr14	96745823	96745824	chr14:96745824:T:C	rs66487336	T	C	T	Hoxd9_MA0913.1	21	0	+	0	0	.
chr14	97022024	97022025	chr14:97022025:A:C	rs1884065	A	C	C	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr14	97107510	97107511	chr14:97107511:A:G	rs11626094	A	G	A	Hoxd9_MA0913.1	14	0	+	0	0	.
chr14	97899433	97899434	chr14:97899434:T:A	rs1043148853	T	A	T	Hoxd9_MA0913.1	8	1	-	8.287725110553424	6.809394508524372	GTCATAAAAT
chr14	97942017	97942018	chr14:97942018:A:G	rs78393732	A	G	A	Hoxd9_MA0913.1	3	1	+	7.3720090125411	5.544390072045995	GCCATTAAAG
chr14	97977200	97977201	chr14:97977201:A:G	rs34164922	A	G	A	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr14	97994957	97994958	chr14:97994958:A:G	rs114263884	A	G	A	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr14	98666071	98666072	chr14:98666072:G:T	rs12586193	G	T	G	Hoxd9_MA0913.1	9	1	-	7.75646393805828	8.838502353310592	GCCATTAAAC
chr14	98921167	98921168	chr14:98921168:A:G	rs200332	A	G	A	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr14	98934283	98934284	chr14:98934284:A:G	rs74080708	A	G	A	Hoxd9_MA0913.1	16	0	-	0	0	.
chr14	98934305	98934306	chr14:98934306:C:T	rs77095136	C	T	C	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr14	99069766	99069767	chr14:99069767:T:C	rs17631267	T	C	T	Hoxd9_MA0913.1	10	0	+	0	0	.
chr14	99151432	99151433	chr14:99151433:C:T	rs1257522	C	T	T	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr14	99178674	99178675	chr14:99178675:C:G	rs2693677	C	G	C	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr14	99191519	99191520	chr14:99191520:C:T	rs117212709	C	T	C	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr14	99195951	99195952	chr14:99195952:T:C	rs12323505	T	C	T	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr14	99230264	99230265	chr14:99230265:A:G	rs115645183	A	G	A	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr14	99243364	99243365	chr14:99243365:A:C	rs941520	A	C	C	Hoxd9_MA0913.1	27	0	+	0	0	.
chr14	99266481	99266482	chr14:99266482:A:C	rs567418635	A	C	A	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr14	99772675	99772676	chr14:99772676:A:T	rs66546610	A	T	A	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr14	99772831	99772832	chr14:99772832:T:C	rs75246060	T	C	T	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr14	99808433	99808434	chr14:99808434:G:A	rs7151803	G	A	A	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr14	99926607	99926608	chr14:99926608:T:C	rs4905920	T	C	t	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr14	99934175	99934176	chr14:99934176:C:T	rs8020741	C	T	C	Hoxd9_MA0913.1	0	1	-	7.801678332738202	6.853944609327742	GCAATAAACA
chr14	100164974	100164975	chr14:100164975:T:C	rs55940508	T	C	T	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr14	100524951	100524952	chr14:100524952:T:C	rs116628813	T	C	T	Hoxd9_MA0913.1	4	1	+	8.282172881897674	4.9900386301226956	CCAATTAAAA
chr14	100849649	100849650	chr14:100849650:C:T	rs780308110	C	T	C	Hoxd9_MA0913.1	16	0	+	0	0	.
chr14	101055983	101055984	chr14:101055984:C:A	rs28366562	C	A	A	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr14	101116328	101116329	chr14:101116329:T:C	rs74899838	T	C	T	Hoxd9_MA0913.1	2	1	-	7.801678332738202	6.124219891280104	GCAATAAACA
chr14	101413538	101413539	chr14:101413539:A:G	rs4900507	A	G	A	Hoxd9_MA0913.1	25	0	-	0	0	.
chr14	101465001	101465002	chr14:101465002:T:C	rs61992171	T	C	T	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr14	101584342	101584343	chr14:101584343:T:C	rs117073603	T	C	T	Hoxd9_MA0913.1	3	1	-	8.123883530932645	6.29626459043754	GCGATAAAAA
chr14	101905078	101905079	chr14:101905079:T:A	rs73360921	T	A	T	Hoxd9_MA0913.1	22	0	+	0	0	.
chr14	102438461	102438462	chr14:102438462:T:C	rs17718208	T	C	T	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr14	102471641	102471642	chr14:102471642:T:C	rs115587836	T	C	C	Hoxd9_MA0913.1	28	0	-	0	0	.
chr14	103194451	103194452	chr14:103194452:G:T	rs185068328	G	T	A	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr14	103393751	103393752	chr14:103393752:C:T	rs74550150	C	T	C	Hoxd9_MA0913.1	10	0	-	0	0	.
chr14	103654356	103654357	chr14:103654357:A:G	rs77040510	A	G	G	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr14	103750881	103750882	chr14:103750882:G:A	rs11160758	G	A	G	Hoxd9_MA0913.1	28	0	+	0	0	.
chr14	103821030	103821031	chr14:103821031:G:C	rs12435668	G	C	G	Hoxd9_MA0913.1	0	1	+	8.287725110553424	6.809726442170165	GTCATAAAAT
chr14	103962238	103962239	chr14:103962239:C:G	rs8021692	C	G	C	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr14	104012963	104012964	chr14:104012964:G:A	rs12895187	G	A	G	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr14	104094881	104094882	chr14:104094882:G:C	rs1022525296	G	C	G	Hoxd9_MA0913.1	20	0	-	0	0	.
chr14	104210432	104210433	chr14:104210433:G:C	rs12895469	G	C	G	Hoxd9_MA0913.1	29	0	-	0	0	.
chr14	104210479	104210480	chr14:104210480:C:T	rs12895202	C	T	C	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr14	104262346	104262347	chr14:104262347:C:T	rs7154429	C	T	C	Hoxd9_MA0913.1	11	0	-	0	0	.
chr14	104321218	104321219	chr14:104321219:A:G	chr14:104321219:A:G	A	G	A	Hoxd9_MA0913.1	28	0	+	0	0	.
chr14	104528953	104528954	chr14:104528954:G:A	rs59432264	G	A	g	Hoxd9_MA0913.1	26	0	+	0	0	.
chr14	104564486	104564487	chr14:104564487:G:A	rs28402960	G	A	G	Hoxd9_MA0913.1	23	0	+	0	0	.
chr14	104692033	104692034	chr14:104692034:A:G	rs12889389	A	G	A	Hoxd9_MA0913.1	15	0	+	0	0	.
chr14	104724194	104724195	chr14:104724195:G:C	rs539976868	G	C	G	Hoxd9_MA0913.1	15	0	-	0	0	.
chr14	104724206	104724207	chr14:104724207:T:C	rs556490247	T	C	T	Hoxd9_MA0913.1	3	1	-	8.594690316172638	6.767071375677533	GCCATTAAAT
chr14	104724221	104724222	chr14:104724222:C:T	rs962261994	C	T	C	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr14	104937273	104937274	chr14:104937274:T:C	rs145238396	T	C	T	Hoxd9_MA0913.1	3	1	-	8.2283733949328	6.4007544544376955	GCAATAAAGA
chr14	105023574	105023575	chr14:105023575:T:C	rs12891766	T	C	T	Hoxd9_MA0913.1	4	1	+	8.287725110553424	4.995590858778444	GTCATAAAAT
chr14	105227453	105227454	chr14:105227454:C:G	rs8014544	C	G	C	Hoxd9_MA0913.1	16	0	+	0	0	.
chr14	105860676	105860677	chr14:105860677:C:T	rs529700961	C	T	.	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr14	105861217	105861218	chr14:105861218:G:C	rs148092712	G	C	.	Hoxd9_MA0913.1	0	1	+	8.187202972822991	6.709204304439732	GCAATTAAGA
chr14	105861228	105861229	chr14:105861229:C:T	rs141869214	C	T	.	Hoxd9_MA0913.1	11	0	+	0	0	.
chr14	105861240	105861241	chr14:105861241:T:C	rs181472970	T	C	.	Hoxd9_MA0913.1	23	0	+	0	0	.
chr14	105875945	105875946	chr14:105875946:G:C	rs2753516	G	C	.	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr14	106257593	106257594	chr14:106257594:C:T	chr14:106257594:C:T	C	T	.	Hoxd9_MA0913.1	29	0	+	0	0	.
chr14	106274757	106274758	chr14:106274758:G:A	rs10151140	G	A	.	Hoxd9_MA0913.1	16	0	+	0	0	.
chr14	106562565	106562566	chr14:106562566:A:G	rs2516939	A	G	a	Hoxd9_MA0913.1	17	0	-	0	0	.
chr14	106625209	106625210	chr14:106625210:A:G	rs2516940	A	G	N	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr14	106649951	106649952	chr14:106649952:G:C	rs2516883	G	C	c	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr14	106681272	106681273	chr14:106681273:A:T	rs4774008	A	T	t	Hoxd9_MA0913.1	1	1	-	8.246554688443613	6.174871940147379	GTCATTAAAT
chr14	106699784	106699785	chr14:106699785:A:C	rs28854542	A	C	c	Hoxd9_MA0913.1	21	0	-	0	0	.
chr15	20292276	20292277	chr15:20292277:T:A	rs4247643	T	A	-	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr15	20663971	20663972	chr15:20663972:A:G	rs62000592	A	G	A	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr15	21270483	21270484	chr15:21270484:T:G	rs4983767	T	G	T	Hoxd9_MA0913.1	17	0	+	0	0	.
chr15	22265042	22265043	chr15:22265043:G:A	rs56222203	G	A	g	Hoxd9_MA0913.1	10	0	-	0	0	.
chr15	22265064	22265065	chr15:22265065:A:G	rs139568775	A	G	a	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr15	22945900	22945901	chr15:22945901:C:T	rs11634023	C	T	T	Hoxd9_MA0913.1	0	1	-	9.453206344661718	8.505472621251258	GTAATAAAAA
chr15	23036235	23036236	chr15:23036236:C:T	rs183224682	C	T	c	Hoxd9_MA0913.1	19	0	+	0	0	.
chr15	23186926	23186927	chr15:23186927:C:G	rs62010353	C	G	.	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr15	23868853	23868854	chr15:23868854:C:T	chr15:23868854:C:T	C	T	C	Hoxd9_MA0913.1	0	1	-	9.55752993525279	8.60979621184233	GCAATAAAAT
chr15	23913062	23913063	chr15:23913063:C:T	rs12440005	C	T	C	Hoxd9_MA0913.1	0	1	-	9.801341972390743	8.853608248980283	GCAATAAAAA
chr15	24624217	24624218	chr15:24624218:T:C	rs28693782	T	C	C	Hoxd9_MA0913.1	4	1	+	8.32301137036169	5.030877118586712	GCAATAAATA
chr15	25421783	25421784	chr15:25421784:C:T	rs61998994	C	T	C	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr15	25439785	25439786	chr15:25439786:A:T	rs74946267	A	T	A	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr15	25473727	25473728	chr15:25473728:C:T	rs7496451	C	T	C	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr15	25508321	25508322	chr15:25508322:T:A	rs2107582	T	A	T	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr15	25508333	25508334	chr15:25508334:G:A	rs10519496	G	A	G	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr15	25568324	25568325	chr15:25568325:G:C	rs4906722	G	C	G	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr15	25721266	25721267	chr15:25721267:C:A	rs17116032	C	A	C	Hoxd9_MA0913.1	15	0	-	0	0	.
chr15	25727643	25727644	chr15:25727644:C:T	rs192684401	C	T	C	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr15	25947326	25947327	chr15:25947327:T:C	rs56009472	T	C	C	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr15	25971405	25971406	chr15:25971406:A:G	rs7172649	A	G	A	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr15	25971409	25971410	chr15:25971410:A:G	rs7172651	A	G	A	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr15	25971418	25971419	chr15:25971419:A:G	rs7172658	A	G	G	Hoxd9_MA0913.1	3	1	+	7.4131794346509094	5.585560494155805	GCCATAAAAG
chr15	26037643	26037644	chr15:26037644:G:T	rs4243761	G	T	G	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr15	26170895	26170896	chr15:26170896:A:G	rs487586	A	G	A	Hoxd9_MA0913.1	18	0	-	0	0	.
chr15	26645750	26645751	chr15:26645751:T:C	rs56383525	T	C	T	Hoxd9_MA0913.1	10	0	-	0	0	.
chr15	26901514	26901515	chr15:26901515:A:C	rs12910133	A	C	a	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr15	27127207	27127208	chr15:27127208:G:T	rs1029935	G	T	T	Hoxd9_MA0913.1	27	0	+	0	0	.
chr15	27318057	27318058	chr15:27318058:C:A	rs62001309	C	A	A	Hoxd9_MA0913.1	24	0	+	0	0	.
chr15	27491692	27491693	chr15:27491693:C:T	rs60853391	C	T	T	Hoxd9_MA0913.1	28	0	+	0	0	.
chr15	27622523	27622524	chr15:27622524:A:G	rs3097440	A	G	G	Hoxd9_MA0913.1	27	0	-	0	0	.
chr15	27740051	27740052	chr15:27740052:A:G	rs4778116	A	G	G	Hoxd9_MA0913.1	10	0	+	0	0	.
chr15	27777603	27777604	chr15:27777604:C:A	rs68182919	C	A	C	Hoxd9_MA0913.1	19	0	-	0	0	.
chr15	27844775	27844776	chr15:27844776:C:T	rs12592271	C	T	C	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr15	27846594	27846595	chr15:27846595:G:T	chr15:27846595:G:T	G	T	G	Hoxd9_MA0913.1	28	0	+	0	0	.
chr15	28203616	28203617	chr15:28203617:C:A	rs186293966	C	A	.	Hoxd9_MA0913.1	26	0	+	0	0	.
chr15	28696159	28696160	chr15:28696160:C:T	rs184395841	C	T	c	Hoxd9_MA0913.1	11	0	-	0	0	.
chr15	28696171	28696172	chr15:28696172:A:G	rs2640278	A	G	a	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr15	28890791	28890792	chr15:28890792:T:C	rs149088908	T	C	t	Hoxd9_MA0913.1	20	0	-	0	0	.
chr15	28963954	28963955	chr15:28963955:A:G	rs2171894	A	G	A	Hoxd9_MA0913.1	20	0	-	0	0	.
chr15	29045568	29045569	chr15:29045569:G:A	rs140937184	G	A	G	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr15	29090865	29090866	chr15:29090866:A:C	rs11070500	A	C	A	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr15	29131471	29131472	chr15:29131472:A:G	rs34864455	A	G	G	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr15	29193106	29193107	chr15:29193107:T:C	rs10438283	T	C	C	Hoxd9_MA0913.1	1	1	+	8.371167929409406	8.719303557138431	GTAATAAAAC
chr15	29193131	29193132	chr15:29193132:G:A	rs564673	G	A	A	Hoxd9_MA0913.1	26	0	+	0	0	.
chr15	29276008	29276009	chr15:29276009:C:G	rs183485190	C	G	C	Hoxd9_MA0913.1	12	0	+	0	0	.
chr15	29283800	29283801	chr15:29283801:C:A	rs116236815	C	A	C	Hoxd9_MA0913.1	27	0	-	0	0	.
chr15	29453829	29453830	chr15:29453830:G:C	rs659546	G	C	G	Hoxd9_MA0913.1	19	0	-	0	0	.
chr15	29623155	29623156	chr15:29623156:G:C	rs8030855	G	C	C	Hoxd9_MA0913.1	15	0	+	0	0	.
chr15	29748116	29748117	chr15:29748117:G:A	rs146318945	G	A	g	Hoxd9_MA0913.1	0	1	+	9.412035922551908	8.464302199141448	GTAATTAAAA
chr15	29852399	29852400	chr15:29852400:A:G	rs74475435	A	G	A	Hoxd9_MA0913.1	9	1	+	8.282172881897674	6.8156795411281825	CCAATTAAAA
chr15	29946791	29946792	chr15:29946792:A:G	rs4779462	A	G	G	Hoxd9_MA0913.1	20	0	-	0	0	.
chr15	29990315	29990316	chr15:29990316:C:T	rs7164994	C	T	T	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr15	30065246	30065247	chr15:30065247:G:A	rs34384012	G	A	G	Hoxd9_MA0913.1	0	1	+	8.187202972822991	7.2394692494125295	GCAATTAAGA
chr15	30175644	30175645	chr15:30175645:C:T	rs145222011	C	T	.	Hoxd9_MA0913.1	18	0	-	0	0	.
chr15	30443401	30443402	chr15:30443402:G:T	rs62016556	G	T	.	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr15	30822591	30822592	chr15:30822592:G:C	chr15:30822592:G:C	G	C	G	Hoxd9_MA0913.1	12	0	+	0	0	.
chr15	30831031	30831032	chr15:30831032:G:A	rs798081	G	A	G	Hoxd9_MA0913.1	27	0	-	0	0	.
chr15	30990534	30990535	chr15:30990535:G:C	rs182230675	G	C	G	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr15	31025148	31025149	chr15:31025149:G:A	rs7182143	G	A	A	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr15	31379228	31379229	chr15:31379229:A:G	rs12437800	A	G	A	Hoxd9_MA0913.1	3	1	+	8.531537147691377	6.703918207196272	GTCATAAAAA
chr15	31390722	31390723	chr15:31390723:T:A	rs34682798	T	A	T	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr15	31462228	31462229	chr15:31462229:T:G	rs75885475	T	G	T	Hoxd9_MA0913.1	19	0	+	0	0	.
chr15	31635937	31635938	chr15:31635938:C:T	rs12900803	C	T	C	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr15	31869402	31869403	chr15:31869403:C:T	rs34315282	C	T	C	Hoxd9_MA0913.1	1	1	+	8.187202972822991	7.839067345093966	GCAATTAAGA
chr15	32109406	32109407	chr15:32109407:T:C	rs10438341	T	C	C	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr15	32240134	32240135	chr15:32240135:C:T	rs1896925	C	T	t	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr15	32702134	32702135	chr15:32702135:G:T	rs12594235	G	T	G	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr15	32744157	32744158	chr15:32744158:T:C	rs11855969	T	C	T	Hoxd9_MA0913.1	10	0	-	0	0	.
chr15	32766321	32766322	chr15:32766322:C:T	rs12148620	C	T	T	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr15	32819446	32819447	chr15:32819447:T:G	rs985200460	T	G	T	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr15	32862385	32862386	chr15:32862386:G:A	rs77841413	G	A	G	Hoxd9_MA0913.1	24	0	+	0	0	.
chr15	32864184	32864185	chr15:32864185:G:A	rs17816465	G	A	G	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr15	32870251	32870252	chr15:32870252:T:C	rs563867824	T	C	T	Hoxd9_MA0913.1	28	0	+	0	0	.
chr15	32918599	32918600	chr15:32918600:G:A	rs10152541	G	A	A	Hoxd9_MA0913.1	0	1	+	8.187202972822991	7.2394692494125295	GCAATTAAGA
chr15	33108726	33108727	chr15:33108727:G:A	rs1300103223	G	A	G	Hoxd9_MA0913.1	10	0	-	0	0	.
chr15	33108733	33108734	chr15:33108734:T:C	rs345770	T	C	C	Hoxd9_MA0913.1	3	1	-	9.51635951314298	7.688740572647875	GCAATTAAAT
chr15	33126684	33126685	chr15:33126685:G:A	rs894227343	G	A	G	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr15	33145518	33145519	chr15:33145519:A:G	rs2061077	A	G	G	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr15	33201425	33201426	chr15:33201426:T:G	rs4779611	T	G	G	Hoxd9_MA0913.1	16	0	+	0	0	.
chr15	33647540	33647541	chr15:33647541:C:T	rs2132206	C	T	C	Hoxd9_MA0913.1	23	0	-	0	0	.
chr15	33830383	33830384	chr15:33830384:T:C	rs7170806	T	C	T	Hoxd9_MA0913.1	4	1	+	7.984561357794846	4.692427106019867	GCAATAAAGT
chr15	33866064	33866065	chr15:33866065:A:G	rs1044129	A	G	A	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr15	34023708	34023709	chr15:34023709:G:A	rs58866635	G	A	G	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr15	34039399	34039400	chr15:34039400:G:A	rs188261893	G	A	G	Hoxd9_MA0913.1	24	0	+	0	0	.
chr15	34467029	34467030	chr15:34467030:T:C	rs6495672	T	C	.	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr15	34514097	34514098	chr15:34514098:T:G	rs4924741	T	G	t	Hoxd9_MA0913.1	5	1	+	7.83890107168488	1.6584083408988224	GCGATTAAAT
chr15	34524446	34524447	chr15:34524447:C:T	rs72625171	C	T	.	Hoxd9_MA0913.1	21	0	+	0	0	.
chr15	34577251	34577252	chr15:34577252:C:G	rs62004905	C	G	c	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr15	34610587	34610588	chr15:34610588:T:G	rs143339655	T	G	T	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr15	34798936	34798937	chr15:34798937:G:C	rs475786	G	C	G	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr15	34810364	34810365	chr15:34810365:A:C	rs7183018	A	C	A	Hoxd9_MA0913.1	13	0	+	0	0	.
chr15	35061843	35061844	chr15:35061844:C:T	rs61476003	C	T	C	Hoxd9_MA0913.1	28	0	-	0	0	.
chr15	35114322	35114323	chr15:35114323:C:T	rs4924543	C	T	C	Hoxd9_MA0913.1	10	0	+	0	0	.
chr15	35246902	35246903	chr15:35246903:T:C	rs318342	T	C	T	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr15	35330075	35330076	chr15:35330076:G:A	rs80274919	G	A	G	Hoxd9_MA0913.1	2	1	-	8.490366725581566	2.9616918907011263	GTCATTAAAA
chr15	35411067	35411068	chr15:35411068:G:C	rs16960864	G	C	G	Hoxd9_MA0913.1	18	0	-	0	0	.
chr15	35541379	35541380	chr15:35541380:G:A	rs11631727	G	A	G	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr15	35545789	35545790	chr15:35545790:T:C	rs1867344	T	C	C	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr15	35545791	35545792	chr15:35545792:G:C	rs4398069	G	C	G	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr15	35697689	35697690	chr15:35697690:C:T	rs4304979	C	T	C	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr15	35838490	35838491	chr15:35838491:A:G	rs74008174	A	G	A	Hoxd9_MA0913.1	2	1	+	8.293678209511443	6.616219768053342	GCAATTAAAG
chr15	35852947	35852948	chr15:35852948:T:C	rs147735639	T	C	T	Hoxd9_MA0913.1	9	1	-	9.412035922551908	7.945542581782417	GTAATTAAAA
chr15	35852957	35852958	chr15:35852958:A:G	rs2683102	A	G	A	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr15	35957218	35957219	chr15:35957219:G:A	rs12101679	G	A	A	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr15	36313133	36313134	chr15:36313134:C:T	rs1517873	C	T	C	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr15	36371265	36371266	chr15:36371266:G:A	rs7167024	G	A	A	Hoxd9_MA0913.1	23	0	-	0	0	.
chr15	36428013	36428014	chr15:36428014:T:G	rs12438760	T	G	T	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr15	36528128	36528129	chr15:36528129:G:A	rs12899475	G	A	g	Hoxd9_MA0913.1	17	0	+	0	0	.
chr15	36580167	36580168	chr15:36580168:T:C	rs6495842	T	C	C	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr15	36708073	36708074	chr15:36708074:G:A	rs11637583	G	A	A	Hoxd9_MA0913.1	24	0	+	0	0	.
chr15	36886707	36886708	chr15:36886708:C:T	rs73389562	C	T	C	Hoxd9_MA0913.1	28	0	-	0	0	.
chr15	36941369	36941370	chr15:36941370:T:A	rs1542260	T	A	A	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr15	36966413	36966414	chr15:36966414:G:A	rs16964414	G	A	G	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr15	36997318	36997319	chr15:36997319:T:C	rs12901667	T	C	T	Hoxd9_MA0913.1	3	1	-	8.853608248980283	7.025989308485178	ACAATAAAAA
chr15	37616339	37616340	chr15:37616340:A:G	rs8041829	A	G	A	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr15	37743397	37743398	chr15:37743398:T:G	rs11852892	T	G	T	Hoxd9_MA0913.1	23	0	-	0	0	.
chr15	37829289	37829290	chr15:37829290:G:A	rs4924193	G	A	A	Hoxd9_MA0913.1	16	0	+	0	0	.
chr15	37878152	37878153	chr15:37878153:G:T	rs11853877	G	T	G	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr15	37878172	37878173	chr15:37878173:T:C	rs72723022	T	C	T	Hoxd9_MA0913.1	5	1	+	8.490366725581566	5.096735376322007	GTCATTAAAA
chr15	38069807	38069808	chr15:38069808:C:T	rs145947431	C	T	C	Hoxd9_MA0913.1	20	0	-	0	0	.
chr15	38069817	38069818	chr15:38069818:C:T	rs34633205	C	T	C	Hoxd9_MA0913.1	10	0	-	0	0	.
chr15	38170119	38170120	chr15:38170120:A:G	rs9783709	A	G	A	Hoxd9_MA0913.1	3	1	+	8.838502353310592	7.010883412815486	GCCATTAAAA
chr15	38187233	38187234	chr15:38187234:T:C	rs55810958	T	C	T	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr15	38205885	38205886	chr15:38205886:G:A	rs72709647	G	A	G	Hoxd9_MA0913.1	22	0	-	0	0	.
chr15	38260121	38260122	chr15:38260122:A:T	rs8036491	A	T	A	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr15	38670651	38670652	chr15:38670652:C:T	rs28671139	C	T	C	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr15	38683277	38683278	chr15:38683278:C:T	rs7183545	C	T	C	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr15	38707932	38707933	chr15:38707933:T:C	rs1438589160	T	C	T	Hoxd9_MA0913.1	21	0	-	0	0	.
chr15	38894391	38894392	chr15:38894392:G:T	rs147523357	G	T	G	Hoxd9_MA0913.1	14	0	-	0	0	.
chr15	39085251	39085252	chr15:39085252:G:C	rs73397636	G	C	G	Hoxd9_MA0913.1	21	0	+	0	0	.
chr15	39165226	39165227	chr15:39165227:G:A	rs73401717	G	A	G	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr15	39184935	39184936	chr15:39184936:A:G	rs78740587	A	G	A	Hoxd9_MA0913.1	7	1	+	9.55752993525279	2.7183854578984463	GCAATAAAAT
chr15	39195374	39195375	chr15:39195375:C:A	rs2623476	C	A	C	Hoxd9_MA0913.1	12	0	+	0	0	.
chr15	39202774	39202775	chr15:39202775:A:C	rs10520123	A	C	A	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr15	39202781	39202782	chr15:39202782:C:T	rs79994695	C	T	C	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr15	39301790	39301791	chr15:39301791:A:G	rs779348684	A	G	A	Hoxd9_MA0913.1	12	0	-	0	0	.
chr15	39365444	39365445	chr15:39365445:G:A	rs1470148	G	A	G	Hoxd9_MA0913.1	9	1	+	8.334848631621252	9.801341972390743	GCAATAAAAG
chr15	39489587	39489588	chr15:39489588:T:A	rs4924361	T	A	T	Hoxd9_MA0913.1	29	0	-	0	0	.
chr15	39499842	39499843	chr15:39499843:C:T	rs116952056	C	T	C	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr15	39554486	39554487	chr15:39554487:G:A	rs73391206	G	A	A	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr15	39623206	39623207	chr15:39623207:G:A	rs16969410	G	A	G	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr15	39631628	39631629	chr15:39631629:T:C	rs2412418	T	C	C	Hoxd9_MA0913.1	1	1	+	9.453206344661718	9.801341972390743	GTAATAAAAA
chr15	39735417	39735418	chr15:39735418:C:A	rs2129456	C	A	A	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr15	39852534	39852535	chr15:39852535:C:T	rs58774997	C	T	C	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr15	39877092	39877093	chr15:39877093:A:C	rs62002525	A	C	A	Hoxd9_MA0913.1	21	0	+	0	0	.
chr15	40755859	40755860	chr15:40755860:G:A	rs7175361	G	A	G	Hoxd9_MA0913.1	1	1	-	8.60979621184233	8.261660584113304	ACAATAAAAT
chr15	40876912	40876913	chr15:40876913:T:A	rs145399017	T	A	T	Hoxd9_MA0913.1	3	1	-	8.2283733949328	4.614033525803817	GCAATAAAGA
chr15	41019076	41019077	chr15:41019077:G:A	rs72735699	G	A	G	Hoxd9_MA0913.1	0	1	+	7.7299109947576845	6.782177271347225	GCAGTAAAAT
chr15	41231034	41231035	chr15:41231035:T:G	rs1007448807	T	G	T	Hoxd9_MA0913.1	3	1	-	9.760171550280933	5.293940879880877	GCAATTAAAA
chr15	41231052	41231053	chr15:41231053:A:C	chr15:41231053:A:C	A	C	A	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr15	41233158	41233159	chr15:41233159:G:A	rs41442144	G	A	A	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr15	41305238	41305239	chr15:41305239:T:A	rs1132639	T	A	t	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr15	41550438	41550439	chr15:41550439:C:T	rs79046686	C	T	C	Hoxd9_MA0913.1	17	0	-	0	0	.
chr15	41620212	41620213	chr15:41620213:T:C	rs9672360	T	C	T	Hoxd9_MA0913.1	15	0	-	0	0	.
chr15	41695849	41695850	chr15:41695850:C:T	rs16971974	C	T	C	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr15	41978198	41978199	chr15:41978199:G:C	rs111991950	G	C	G	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr15	42184366	42184367	chr15:42184367:C:G	rs114200041	C	G	C	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr15	42495452	42495453	chr15:42495453:T:C	rs546830416	T	C	T	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr15	42822105	42822106	chr15:42822106:T:C	rs58745709	T	C	C	Hoxd9_MA0913.1	13	0	-	0	0	.
chr15	42826425	42826426	chr15:42826426:C:T	rs74536015	C	T	C	Hoxd9_MA0913.1	11	0	-	0	0	.
chr15	43105566	43105567	chr15:43105567:A:G	rs553389161	A	G	A	Hoxd9_MA0913.1	10	0	+	0	0	.
chr15	43126559	43126560	chr15:43126560:G:A	rs2139651	G	A	G	Hoxd9_MA0913.1	14	0	-	0	0	.
chr15	43603443	43603444	chr15:43603444:G:A	rs28495368	G	A	g	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr15	43603444	43603445	chr15:43603445:C:T	rs2260160	C	T	c	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr15	44148693	44148694	chr15:44148694:T:G	rs76351064	T	G	T	Hoxd9_MA0913.1	6	1	-	9.412035922551908	4.937459059883702	GTAATTAAAA
chr15	44194320	44194321	chr15:44194321:C:T	rs555511240	C	T	C	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr15	45167331	45167332	chr15:45167332:G:A	rs898725462	G	A	G	Hoxd9_MA0913.1	29	0	-	0	0	.
chr15	45198758	45198759	chr15:45198759:A:G	rs186210651	A	G	A	Hoxd9_MA0913.1	8	1	+	8.246554688443613	6.673586110985671	GTCATTAAAT
chr15	45334510	45334511	chr15:45334511:A:G	chr15:45334511:A:G	A	G	A	Hoxd9_MA0913.1	16	0	+	0	0	.
chr15	45387219	45387220	chr15:45387220:T:G	rs149323827	T	G	T	Hoxd9_MA0913.1	26	0	+	0	0	.
chr15	45658236	45658237	chr15:45658237:G:A	rs664824	G	A	A	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr15	45715165	45715166	chr15:45715166:G:A	rs637031	G	A	G	Hoxd9_MA0913.1	27	0	-	0	0	.
chr15	45720364	45720365	chr15:45720365:A:G	rs694299	A	G	G	Hoxd9_MA0913.1	2	1	+	8.853608248980283	7.176149807522183	ACAATAAAAA
chr15	45747339	45747340	chr15:45747340:T:C	rs1033167	T	C	T	Hoxd9_MA0913.1	1	1	+	9.412035922551908	9.760171550280933	GTAATTAAAA
chr15	45778256	45778257	chr15:45778257:T:C	rs11638816	T	C	C	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr15	46059268	46059269	chr15:46059269:T:G	rs76150641	T	G	T	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr15	46596341	46596342	chr15:46596342:T:C	rs10851436	T	C	C	Hoxd9_MA0913.1	9	1	+	8.246554688443613	7.408328310329255	GTCATTAAAT
chr15	46653382	46653383	chr15:46653383:C:T	rs531768	C	T	T	Hoxd9_MA0913.1	24	0	-	0	0	.
chr15	46786522	46786523	chr15:46786523:C:T	rs10519079	C	T	C	Hoxd9_MA0913.1	19	0	+	0	0	.
chr15	46879126	46879127	chr15:46879127:C:T	rs9920831	C	T	C	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr15	46941524	46941525	chr15:46941525:G:A	rs141365824	G	A	G	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr15	47274135	47274136	chr15:47274136:A:G	rs1470981	A	G	A	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr15	47288741	47288742	chr15:47288742:T:C	rs766132	T	C	T	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr15	47338149	47338150	chr15:47338150:A:C	rs673406	A	C	C	Hoxd9_MA0913.1	6	1	+	9.760171550280933	5.285594687612727	GCAATTAAAA
chr15	47392734	47392735	chr15:47392735:A:C	rs1025142	A	C	A	Hoxd9_MA0913.1	11	0	-	0	0	.
chr15	47392738	47392739	chr15:47392739:T:C	rs34488670	T	C	T	Hoxd9_MA0913.1	7	1	-	8.879672775420401	2.040528298066059	GCCATAAAAA
chr15	47461642	47461643	chr15:47461643:G:A	rs77105518	G	A	A	Hoxd9_MA0913.1	28	0	-	0	0	.
chr15	47547587	47547588	chr15:47547588:G:T	rs8027136	G	T	G	Hoxd9_MA0913.1	14	0	+	0	0	.
chr15	47780002	47780003	chr15:47780003:T:A	rs4774505	T	A	T	Hoxd9_MA0913.1	7	1	-	8.594690316172638	5.3008435644542065	GCCATTAAAT
chr15	47841599	47841600	chr15:47841600:G:T	rs639085	G	T	T	Hoxd9_MA0913.1	16	0	-	0	0	.
chr15	47919737	47919738	chr15:47919738:A:G	rs2965306	A	G	A	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr15	48062661	48062662	chr15:48062662:G:T	rs75861473	G	T	G	Hoxd9_MA0913.1	0	1	+	9.760171550280933	6.723028854328064	GCAATTAAAA
chr15	48249906	48249907	chr15:48249907:G:A	rs2279367	G	A	G	Hoxd9_MA0913.1	0	1	+	8.079199333223738	7.131465609813278	GCAATAAATT
chr15	48553524	48553525	chr15:48553525:G:A	rs11857382	G	A	G	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr15	48566406	48566407	chr15:48566407:A:T	rs148927513	A	T	A	Hoxd9_MA0913.1	22	0	-	0	0	.
chr15	48616296	48616297	chr15:48616297:T:C	rs71394949	T	C	T	Hoxd9_MA0913.1	9	1	-	8.812437826870472	7.34594448610098	ACAATTAAAA
chr15	48632784	48632785	chr15:48632785:T:C	rs12324694	T	C	T	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr15	48643236	48643237	chr15:48643237:C:T	rs144028749	C	T	C	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr15	48805818	48805819	chr15:48805819:C:A	rs1426200	C	A	A	Hoxd9_MA0913.1	24	0	+	0	0	.
chr15	48852309	48852310	chr15:48852310:T:C	rs73400401	T	C	T	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr15	48868820	48868821	chr15:48868821:T:C	rs140035601	T	C	T	Hoxd9_MA0913.1	28	0	+	0	0	.
chr15	49361606	49361607	chr15:49361607:C:T	rs8024184	C	T	T	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr15	49423191	49423192	chr15:49423192:C:T	rs73398286	C	T	C	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr15	49456415	49456416	chr15:49456416:G:A	rs17479289	G	A	A	Hoxd9_MA0913.1	28	0	+	0	0	.
chr15	49464571	49464572	chr15:49464572:T:C	rs11070694	T	C	T	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr15	49624108	49624109	chr15:49624109:T:A	rs1174277664	T	A	T	Hoxd9_MA0913.1	23	0	+	0	0	.
chr15	49624109	49624110	chr15:49624110:T:A	rs908359295	T	A	T	Hoxd9_MA0913.1	24	0	+	0	0	.
chr15	49718655	49718656	chr15:49718656:C:T	rs11070715	C	T	T	Hoxd9_MA0913.1	22	0	-	0	0	.
chr15	50023055	50023056	chr15:50023056:G:A	rs4580097	G	A	A	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr15	50258885	50258886	chr15:50258886:T:C	rs854153	T	C	C	Hoxd9_MA0913.1	25	0	+	0	0	.
chr15	50519978	50519979	chr15:50519979:T:C	rs3131605	T	C	C	Hoxd9_MA0913.1	12	0	-	0	0	.
chr15	50524227	50524228	chr15:50524228:T:C	rs76077201	T	C	T	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr15	50654617	50654618	chr15:50654618:A:G	rs11070802	A	G	A	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr15	50668940	50668941	chr15:50668941:G:A	rs8029941	G	A	G	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr15	50673289	50673290	chr15:50673290:G:C	rs11858301	G	C	G	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr15	50765009	50765010	chr15:50765010:T:G	rs573171000	T	G	T	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr15	50865036	50865037	chr15:50865037:G:A	rs77752166	G	A	A	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr15	51012187	51012188	chr15:51012188:T:C	chr15:51012188:T:C	T	C	T	Hoxd9_MA0913.1	22	0	-	0	0	.
chr15	51133809	51133810	chr15:51133810:T:C	rs55972942	T	C	T	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr15	51144199	51144200	chr15:51144200:T:C	rs11070836	T	C	T	Hoxd9_MA0913.1	6	1	-	8.334848631621252	1.5194279638419104	GCAATAAAAG
chr15	51323418	51323419	chr15:51323419:T:C	rs2445761	T	C	C	Hoxd9_MA0913.1	29	0	-	0	0	.
chr15	51366095	51366096	chr15:51366096:G:A	rs4774588	G	A	A	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr15	51391170	51391171	chr15:51391171:C:T	rs56158617	C	T	T	Hoxd9_MA0913.1	28	0	+	0	0	.
chr15	51424983	51424984	chr15:51424984:G:T	rs74013216	G	T	-	Hoxd9_MA0913.1	28	0	-	0	0	.
chr15	51537104	51537105	chr15:51537105:T:A	rs9920535	T	A	T	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr15	51602072	51602073	chr15:51602073:A:T	rs11070861	A	T	T	Hoxd9_MA0913.1	20	0	+	0	0	.
chr15	51672590	51672591	chr15:51672591:A:G	rs1378893	A	G	G	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr15	51755976	51755977	chr15:51755977:A:G	rs7174497	A	G	A	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr15	51770909	51770910	chr15:51770910:G:A	rs6493519	G	A	A	Hoxd9_MA0913.1	18	0	-	0	0	.
chr15	52079235	52079236	chr15:52079236:C:T	rs545062943	C	T	C	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr15	52095483	52095484	chr15:52095484:C:T	rs41494446	C	T	c	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr15	52095522	52095523	chr15:52095523:T:C	rs28613818	T	C	T	Hoxd9_MA0913.1	26	0	+	0	0	.
chr15	52095765	52095766	chr15:52095766:C:G	rs28533194	C	G	C	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr15	52096024	52096025	chr15:52096025:C:T	rs7402987	C	T	T	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr15	52563723	52563724	chr15:52563724:C:G	rs57187323	C	G	C	Hoxd9_MA0913.1	18	0	+	0	0	.
chr15	53128935	53128936	chr15:53128936:C:A	rs185460448	C	A	C	Hoxd9_MA0913.1	0	1	-	8.2283733949328	5.191230698979931	GCAATAAAGA
chr15	53247435	53247436	chr15:53247436:A:G	rs1872699	A	G	A	Hoxd9_MA0913.1	21	0	+	0	0	.
chr15	53537315	53537316	chr15:53537316:T:G	rs7178004	T	G	G	Hoxd9_MA0913.1	18	0	-	0	0	.
chr15	53759055	53759056	chr15:53759056:C:T	rs7183817	C	T	T	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr15	53812932	53812933	chr15:53812933:C:G	rs17198159	C	G	G	Hoxd9_MA0913.1	24	0	-	0	0	.
chr15	53885352	53885353	chr15:53885353:C:T	rs28768471	C	T	C	Hoxd9_MA0913.1	20	0	+	0	0	.
chr15	54520545	54520546	chr15:54520546:A:G	rs28731017	A	G	A	Hoxd9_MA0913.1	4	1	-	9.51635951314298	6.224225261367999	GCAATTAAAT
chr15	54963620	54963621	chr15:54963621:C:T	rs10851581	C	T	T	Hoxd9_MA0913.1	20	0	-	0	0	.
chr15	55109245	55109246	chr15:55109246:A:C	rs77699560	A	C	A	Hoxd9_MA0913.1	8	1	+	7.7299109947576845	5.730247355105144	GCAGTAAAAT
chr15	55401923	55401924	chr15:55401924:C:T	rs58053176	C	T	C	Hoxd9_MA0913.1	0	1	-	9.51635951314298	8.568625789732518	GCAATTAAAT
chr15	55549589	55549590	chr15:55549590:C:T	rs7164878	C	T	C	Hoxd9_MA0913.1	24	0	+	0	0	.
chr15	55648754	55648755	chr15:55648755:T:C	rs1039747068	T	C	T	Hoxd9_MA0913.1	19	0	+	0	0	.
chr15	55696339	55696340	chr15:55696340:A:G	rs16976479	A	G	A	Hoxd9_MA0913.1	27	0	-	0	0	.
chr15	55739900	55739901	chr15:55739901:A:G	rs12442771	A	G	G	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr15	55762730	55762731	chr15:55762731:C:A	rs7165205	C	A	C	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr15	55762745	55762746	chr15:55762746:C:A	rs7165214	C	A	C	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr15	55846569	55846570	chr15:55846570:C:T	rs140874639	C	T	C	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr15	55846605	55846606	chr15:55846606:C:T	rs144659506	C	T	A	Hoxd9_MA0913.1	19	0	+	0	0	.
chr15	55907383	55907384	chr15:55907384:C:T	rs17819294	C	T	T	Hoxd9_MA0913.1	24	0	+	0	0	.
chr15	55955360	55955361	chr15:55955361:A:G	rs111889278	A	G	A	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr15	56050237	56050238	chr15:56050238:C:T	rs12913391	C	T	C	Hoxd9_MA0913.1	19	0	-	0	0	.
chr15	56098417	56098418	chr15:56098418:T:G	rs748344	T	G	T	Hoxd9_MA0913.1	16	0	+	0	0	.
chr15	56181122	56181123	chr15:56181123:A:G	rs72738636	A	G	A	Hoxd9_MA0913.1	13	0	+	0	0	.
chr15	56320091	56320092	chr15:56320092:T:A	rs2725850	T	A	A	Hoxd9_MA0913.1	23	0	-	0	0	.
chr15	56449979	56449980	chr15:56449980:C:A	rs35978617	C	A	C	Hoxd9_MA0913.1	11	0	-	0	0	.
chr15	56925532	56925533	chr15:56925533:A:G	rs169893	A	G	A	Hoxd9_MA0913.1	3	1	+	7.801678332738202	5.974059392243097	GCAATAAACA
chr15	57122742	57122743	chr15:57122743:A:G	rs185536331	A	G	A	Hoxd9_MA0913.1	3	1	+	8.568625789732518	6.741006849237415	ACAATTAAAT
chr15	57171687	57171688	chr15:57171688:C:T	rs55702628	C	T	C	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr15	57223838	57223839	chr15:57223839:A:G	rs12912353	A	G	A	Hoxd9_MA0913.1	0	1	+	8.568625789732518	9.51635951314298	ACAATTAAAT
chr15	57236558	57236559	chr15:57236559:A:G	rs72733941	A	G	A	Hoxd9_MA0913.1	19	0	+	0	0	.
chr15	57259590	57259591	chr15:57259591:A:G	rs2733330	A	G	A	Hoxd9_MA0913.1	24	0	-	0	0	.
chr15	57307508	57307509	chr15:57307509:C:A	rs72736018	C	A	C	Hoxd9_MA0913.1	2	1	+	8.635860738282448	9.55752993525279	GCCATAAAAT
chr15	57328577	57328578	chr15:57328578:G:A	rs4534776	G	A	G	Hoxd9_MA0913.1	28	0	-	0	0	.
chr15	57352457	57352458	chr15:57352458:A:G	rs2431042	A	G	A	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr15	57610283	57610284	chr15:57610284:G:C	rs724785	G	C	G	Hoxd9_MA0913.1	18	0	+	0	0	.
chr15	57655433	57655434	chr15:57655434:C:T	rs4774277	C	T	C	Hoxd9_MA0913.1	19	0	-	0	0	.
chr15	58060838	58060839	chr15:58060839:T:A	rs2704225	T	A	A	Hoxd9_MA0913.1	22	0	-	0	0	.
chr15	58172379	58172380	chr15:58172380:A:C	rs2414546	A	C	A	Hoxd9_MA0913.1	23	0	-	0	0	.
chr15	58270181	58270182	chr15:58270182:C:T	rs139582468	C	T	C	Hoxd9_MA0913.1	27	0	-	0	0	.
chr15	58270182	58270183	chr15:58270183:T:C	rs115185040	T	C	T	Hoxd9_MA0913.1	26	0	-	0	0	.
chr15	58270213	58270214	chr15:58270214:G:A	rs149709384	G	A	G	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr15	58356218	58356219	chr15:58356219:C:T	rs1864482	C	T	C	Hoxd9_MA0913.1	9	1	+	8.719303557138431	9.55752993525279	GCAATAAAAC
chr15	58474236	58474237	chr15:58474237:G:A	rs10152372	G	A	G	Hoxd9_MA0913.1	18	0	+	0	0	.
chr15	58509885	58509886	chr15:58509886:G:C	rs2899631	G	C	C	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr15	58557675	58557676	chr15:58557676:C:T	rs28619338	C	T	C	Hoxd9_MA0913.1	29	0	-	0	0	.
chr15	58655276	58655277	chr15:58655277:C:G	rs12915950	C	G	G	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr15	58948601	58948602	chr15:58948602:T:G	rs7167050	T	G	G	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr15	59167122	59167123	chr15:59167123:C:T	rs8036093	C	T	T	Hoxd9_MA0913.1	16	0	-	0	0	.
chr15	59240199	59240200	chr15:59240200:C:T	rs68078916	C	T	c	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr15	59366496	59366497	chr15:59366497:G:A	rs140261493	G	A	G	Hoxd9_MA0913.1	22	0	-	0	0	.
chr15	59492526	59492527	chr15:59492527:T:C	rs16941446	T	C	T	Hoxd9_MA0913.1	4	1	+	8.635860738282448	5.343726486507468	GCCATAAAAT
chr15	59549685	59549686	chr15:59549686:G:A	rs67915343	G	A	A	Hoxd9_MA0913.1	11	0	+	0	0	.
chr15	59587245	59587246	chr15:59587246:C:T	rs79978003	C	T	T	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr15	59674353	59674354	chr15:59674354:G:A	rs12593480	G	A	A	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr15	59674847	59674848	chr15:59674848:C:T	rs11071469	C	T	C	Hoxd9_MA0913.1	0	1	-	7.4131794346509094	6.4654457112404495	GCCATAAAAG
chr15	59741264	59741265	chr15:59741265:T:C	rs16941707	T	C	C	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr15	59821609	59821610	chr15:59821610:A:T	rs2965332	A	T	T	Hoxd9_MA0913.1	12	0	+	0	0	.
chr15	60086976	60086977	chr15:60086977:A:C	rs61266711	A	C	A	Hoxd9_MA0913.1	17	0	+	0	0	.
chr15	60212883	60212884	chr15:60212884:G:C	rs1680197	G	C	C	Hoxd9_MA0913.1	13	0	-	0	0	.
chr15	60212905	60212906	chr15:60212906:T:A	rs2414662	T	A	T	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr15	60318695	60318696	chr15:60318696:T:C	rs11071516	T	C	T	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr15	60379889	60379890	chr15:60379890:G:C	rs143256132	G	C	G	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr15	60486814	60486815	chr15:60486815:C:T	rs36104504	C	T	c	Hoxd9_MA0913.1	0	1	-	8.490366725581566	7.542633002171106	GTCATTAAAA
chr15	60507945	60507946	chr15:60507946:A:G	rs17191442	A	G	A	Hoxd9_MA0913.1	8	1	+	8.323343304007485	6.750374726549543	CCAATAAAAA
chr15	60720032	60720033	chr15:60720033:C:T	rs141870666	C	T	C	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr15	60720059	60720060	chr15:60720060:C:A	rs1863270	C	A	C	Hoxd9_MA0913.1	19	0	+	0	0	.
chr15	61156458	61156459	chr15:61156459:G:T	rs188884813	G	T	G	Hoxd9_MA0913.1	17	0	+	0	0	.
chr15	61174798	61174799	chr15:61174799:C:T	rs4774388	C	T	T	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr15	61647720	61647721	chr15:61647721:T:C	rs139232701	T	C	T	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr15	61791436	61791437	chr15:61791437:C:G	rs17238012	C	G	C	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr15	61856845	61856846	chr15:61856846:T:C	rs1052306	T	C	T	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr15	62087771	62087772	chr15:62087772:A:G	rs7177711	A	G	A	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr15	62099334	62099335	chr15:62099335:G:A	rs80311743	G	A	G	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr15	62413425	62413426	chr15:62413426:A:G	rs76657506	A	G	A	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr15	62429568	62429569	chr15:62429569:C:T	rs4775500	C	T	C	Hoxd9_MA0913.1	0	1	-	9.51635951314298	8.568625789732518	GCAATTAAAT
chr15	62665913	62665914	chr15:62665914:C:T	rs6494343	C	T	C	Hoxd9_MA0913.1	18	0	+	0	0	.
chr15	62701037	62701038	chr15:62701038:C:T	rs77026267	C	T	c	Hoxd9_MA0913.1	0	1	-	8.635860738282448	7.688127014871988	GCCATAAAAT
chr15	62835024	62835025	chr15:62835025:G:A	rs8033703	G	A	A	Hoxd9_MA0913.1	15	0	-	0	0	.
chr15	62863108	62863109	chr15:62863109:G:T	rs619306	G	T	T	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr15	63013525	63013526	chr15:63013526:G:T	rs11854861	G	T	T	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr15	63063671	63063672	chr15:63063672:C:G	rs8042050	C	G	G	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr15	63236056	63236057	chr15:63236057:C:A	rs11853804	C	A	A	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr15	63250609	63250610	chr15:63250610:A:C	rs112861248	A	C	A	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr15	63370947	63370948	chr15:63370948:G:A	rs16946956	G	A	G	Hoxd9_MA0913.1	13	0	-	0	0	.
chr15	63370948	63370949	chr15:63370949:G:T	rs79882092	G	T	G	Hoxd9_MA0913.1	12	0	-	0	0	.
chr15	63503081	63503082	chr15:63503082:G:A	chr15:63503082:G:A	G	A	G	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr15	63606413	63606414	chr15:63606414:C:T	rs62012786	C	T	C	Hoxd9_MA0913.1	13	0	+	0	0	.
chr15	63708175	63708176	chr15:63708176:C:A	rs145211343	C	A	C	Hoxd9_MA0913.1	1	1	+	8.719303557138431	6.299485181113172	GCAATAAAAC
chr15	63907008	63907009	chr15:63907009:G:A	rs6494452	G	A	G	Hoxd9_MA0913.1	0	1	+	8.879672775420401	7.931939052009941	GCCATAAAAA
chr15	63910017	63910018	chr15:63910018:G:A	rs569036943	G	A	G	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr15	63910027	63910028	chr15:63910028:A:G	rs77652676	A	G	A	Hoxd9_MA0913.1	3	1	+	8.853608248980283	7.025989308485178	ACAATAAAAA
chr15	64004231	64004232	chr15:64004232:G:A	rs112791424	G	A	G	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr15	64885026	64885027	chr15:64885027:T:A	rs1719266	T	A	A	Hoxd9_MA0913.1	13	0	-	0	0	.
chr15	65513050	65513051	chr15:65513051:T:C	rs352476	T	C	T	Hoxd9_MA0913.1	10	0	+	0	0	.
chr15	66180803	66180804	chr15:66180804:C:T	rs16949618	C	T	C	Hoxd9_MA0913.1	17	0	-	0	0	.
chr15	66429192	66429193	chr15:66429193:G:A	rs12906411	G	A	A	Hoxd9_MA0913.1	12	0	-	0	0	.
chr15	66592610	66592611	chr15:66592611:C:T	rs10152484	C	T	C	Hoxd9_MA0913.1	1	1	+	8.187202972822991	7.839067345093966	GCAATTAAGA
chr15	66592636	66592637	chr15:66592637:T:C	rs4776304	T	C	C	Hoxd9_MA0913.1	27	0	+	0	0	.
chr15	66752019	66752020	chr15:66752020:C:A	rs12439327	C	A	A	Hoxd9_MA0913.1	17	0	-	0	0	.
chr15	66766920	66766921	chr15:66766921:A:G	rs4390543	A	G	G	Hoxd9_MA0913.1	6	1	+	8.334848631621252	1.5194279638419104	GCAATAAAAG
chr15	66784608	66784609	chr15:66784609:A:G	rs4147407	A	G	A	Hoxd9_MA0913.1	9	1	-	8.079531266869532	7.241304888755173	CCAATAAAAT
chr15	66784621	66784622	chr15:66784622:G:C	rs117287881	G	C	G	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr15	66858858	66858859	chr15:66858859:C:T	rs77248314	C	T	C	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr15	67094974	67094975	chr15:67094975:C:T	rs7169630	C	T	T	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr15	67094990	67094991	chr15:67094991:T:G	rs77773620	T	G	T	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr15	67125866	67125867	chr15:67125867:G:A	rs16950635	G	A	G	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr15	67373227	67373228	chr15:67373228:A:G	rs34983272	A	G	A	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr15	67373232	67373233	chr15:67373233:T:A	rs76024542	T	A	T	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr15	67912018	67912019	chr15:67912019:G:T	rs7172137	G	T	G	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr15	68061313	68061314	chr15:68061314:A:G	rs8033075	A	G	A	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr15	68114288	68114289	chr15:68114289:T:G	rs116869465	T	G	T	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr15	68305383	68305384	chr15:68305384:A:G	chr15:68305384:A:G	A	G	A	Hoxd9_MA0913.1	25	0	-	0	0	.
chr15	68469957	68469958	chr15:68469958:C:T	rs4587923	C	T	C	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr15	68765860	68765861	chr15:68765861:G:A	rs116283474	G	A	G	Hoxd9_MA0913.1	24	0	-	0	0	.
chr15	68793193	68793194	chr15:68793194:T:C	rs1551345	T	C	T	Hoxd9_MA0913.1	25	0	-	0	0	.
chr15	68793206	68793207	chr15:68793207:T:A	rs1551344	T	A	T	Hoxd9_MA0913.1	12	0	-	0	0	.
chr15	69225962	69225963	chr15:69225963:C:T	rs533923825	C	T	C	Hoxd9_MA0913.1	18	0	-	0	0	.
chr15	69272003	69272004	chr15:69272004:C:T	rs6545	C	T	C	Hoxd9_MA0913.1	22	0	+	0	0	.
chr15	69339656	69339657	chr15:69339657:C:T	rs12595397	C	T	C	Hoxd9_MA0913.1	0	1	-	9.453206344661718	8.505472621251258	GTAATAAAAA
chr15	69474527	69474528	chr15:69474528:A:C	rs8023297	A	C	C	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr15	69561822	69561823	chr15:69561823:C:T	rs75458114	C	T	C	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr15	69701752	69701753	chr15:69701753:A:G	rs34398118	A	G	A	Hoxd9_MA0913.1	21	0	-	0	0	.
chr15	69723963	69723964	chr15:69723964:T:A	rs143654202	T	A	T	Hoxd9_MA0913.1	3	1	-	7.306704197962459	3.6923643288334764	GCCATAAAGA
chr15	69734957	69734958	chr15:69734958:C:G	chr15:69734958:C:G	C	G	C	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr15	69779438	69779439	chr15:69779439:G:A	rs10518837	G	A	G	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr15	69782576	69782577	chr15:69782577:A:T	rs4777195	A	T	A	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr15	70048171	70048172	chr15:70048172:G:A	rs3743309	G	A	G	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr15	70062593	70062594	chr15:70062594:G:A	rs34573732	G	A	G	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr15	70064220	70064221	chr15:70064221:C:A	rs61999938	C	A	C	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr15	70226906	70226907	chr15:70226907:T:A	rs28375532	T	A	T	Hoxd9_MA0913.1	8	1	-	8.334848631621252	6.856518029592199	GCAATAAAAG
chr15	70323933	70323934	chr15:70323934:A:G	chr15:70323934:A:G	A	G	A	Hoxd9_MA0913.1	22	0	-	0	0	.
chr15	70377093	70377094	chr15:70377094:C:G	rs118099298	C	G	C	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr15	70377094	70377095	chr15:70377095:T:G	rs116874596	T	G	T	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr15	70446507	70446508	chr15:70446508:C:A	rs8038707	C	A	A	Hoxd9_MA0913.1	1	1	+	8.853608248980283	6.433789872955025	ACAATAAAAA
chr15	70480626	70480627	chr15:70480627:G:A	rs187615085	G	A	g	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr15	70556328	70556329	chr15:70556329:G:A	rs73439391	G	A	G	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr15	70575945	70575946	chr15:70575946:G:A	rs1896437	G	A	A	Hoxd9_MA0913.1	0	1	+	7.7976343601680895	6.84990063675763	GCCATAAAAC
chr15	70643782	70643783	chr15:70643783:G:A	rs3919623	G	A	A	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr15	70813096	70813097	chr15:70813097:G:T	rs74023637	G	T	G	Hoxd9_MA0913.1	25	0	-	0	0	.
chr15	70873480	70873481	chr15:70873481:T:C	rs62019072	T	C	T	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr15	70995763	70995764	chr15:70995764:C:T	rs115943840	C	T	T	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr15	71117259	71117260	chr15:71117260:T:G	chr15:71117260:T:G	T	G	T	Hoxd9_MA0913.1	18	0	+	0	0	.
chr15	71240891	71240892	chr15:71240892:G:A	rs7180149	G	A	A	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr15	71296738	71296739	chr15:71296739:G:A	rs72759684	G	A	G	Hoxd9_MA0913.1	27	0	+	0	0	.
chr15	71329731	71329732	chr15:71329732:G:C	chr15:71329732:G:C	G	C	G	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr15	71329733	71329734	chr15:71329734:A:T	rs75164061	A	T	A	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr15	71363295	71363296	chr15:71363296:C:G	rs4776550	C	G	C	Hoxd9_MA0913.1	20	0	+	0	0	.
chr15	71445281	71445282	chr15:71445282:C:T	rs74596779	C	T	C	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr15	71559899	71559900	chr15:71559900:T:C	rs56028454	T	C	T	Hoxd9_MA0913.1	3	1	-	8.079199333223738	6.251580392728633	GCAATAAATT
chr15	71626865	71626866	chr15:71626866:T:C	rs4572339	T	C	T	Hoxd9_MA0913.1	14	0	+	0	0	.
chr15	71677822	71677823	chr15:71677823:G:C	rs75125772	G	C	G	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr15	71917221	71917222	chr15:71917222:C:T	rs930516989	C	T	C	Hoxd9_MA0913.1	24	0	+	0	0	.
chr15	71973002	71973003	chr15:71973003:A:G	rs2957736	A	G	A	Hoxd9_MA0913.1	28	0	+	0	0	.
chr15	72227269	72227270	chr15:72227270:A:T	rs2959906	A	T	T	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr15	72227294	72227295	chr15:72227295:T:G	rs8192367	T	G	G	Hoxd9_MA0913.1	23	0	+	0	0	.
chr15	72321143	72321144	chr15:72321144:C:T	rs11072355	C	T	T	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr15	72785944	72785945	chr15:72785945:A:T	rs4777540	A	T	A	Hoxd9_MA0913.1	0	1	+	8.812437826870472	6.723028854328064	ACAATTAAAA
chr15	73162692	73162693	chr15:73162693:T:C	rs4776627	T	C	C	Hoxd9_MA0913.1	28	0	-	0	0	.
chr15	73700464	73700465	chr15:73700465:T:C	rs1030107943	T	C	T	Hoxd9_MA0913.1	22	0	+	0	0	.
chr15	73766444	73766445	chr15:73766445:C:T	rs4243087	C	T	C	Hoxd9_MA0913.1	20	0	-	0	0	.
chr15	73824303	73824304	chr15:73824304:G:T	rs76471550	G	T	g	Hoxd9_MA0913.1	18	0	-	0	0	.
chr15	73837443	73837444	chr15:73837444:G:A	rs16958372	G	A	A	Hoxd9_MA0913.1	17	0	+	0	0	.
chr15	74222964	74222965	chr15:74222965:G:T	rs16966903	G	T	G	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr15	74315025	74315026	chr15:74315026:G:T	rs74692356	G	T	G	Hoxd9_MA0913.1	1	1	-	8.719303557138431	6.299485181113172	GCAATAAAAC
chr15	74642433	74642434	chr15:74642434:A:C	rs1172702142	A	C	A	Hoxd9_MA0913.1	16	0	-	0	0	.
chr15	74642434	74642435	chr15:74642435:C:T	rs74025819	C	T	C	Hoxd9_MA0913.1	15	0	-	0	0	.
chr15	74843626	74843627	chr15:74843627:T:G	chr15:74843627:T:G	T	G	T	Hoxd9_MA0913.1	2	1	-	8.32301137036169	7.401342173391351	GCAATAAATA
chr15	74978887	74978888	chr15:74978888:C:T	rs1867153	C	T	C	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr15	75061633	75061634	chr15:75061634:A:C	rs8033837	A	C	C	Hoxd9_MA0913.1	18	0	+	0	0	.
chr15	75462143	75462144	chr15:75462144:A:C	rs115522398	A	C	A	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr15	76010830	76010831	chr15:76010831:T:C	rs16967774	T	C	t	Hoxd9_MA0913.1	3	1	-	8.282172881897674	6.454553941402571	CCAATTAAAA
chr15	76161993	76161994	chr15:76161994:C:T	rs2959860	C	T	C	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr15	76181758	76181759	chr15:76181759:A:G	rs114131771	A	G	A	Hoxd9_MA0913.1	11	0	+	0	0	.
chr15	76181765	76181766	chr15:76181766:C:T	rs112912366	C	T	C	Hoxd9_MA0913.1	18	0	+	0	0	.
chr15	76669771	76669772	chr15:76669772:T:C	rs62026902	T	C	T	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr15	77076369	77076370	chr15:77076370:T:A	rs938501	T	A	A	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr15	77088374	77088375	chr15:77088375:C:G	rs16968665	C	G	G	Hoxd9_MA0913.1	29	0	-	0	0	.
chr15	77420616	77420617	chr15:77420617:T:C	rs1377416999	T	C	T	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr15	78077953	78077954	chr15:78077954:T:C	rs148924439	T	C	T	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr15	78206604	78206605	chr15:78206605:G:A	rs1011173	G	A	G	Hoxd9_MA0913.1	0	1	+	7.75646393805828	6.808730214647819	GCCATTAAAC
chr15	78397040	78397041	chr15:78397041:C:T	rs3743085	C	T	c	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr15	78425562	78425563	chr15:78425563:T:C	rs4390557	T	C	T	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr15	78602416	78602417	chr15:78602417:C:G	rs3743078	C	G	C	Hoxd9_MA0913.1	27	0	+	0	0	.
chr15	78705219	78705220	chr15:78705220:A:C	rs1825089	A	C	A	Hoxd9_MA0913.1	27	0	-	0	0	.
chr15	78735858	78735859	chr15:78735859:C:T	rs1809415	C	T	-	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr15	78902458	78902459	chr15:78902459:A:C	rs118056078	A	C	A	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr15	78938703	78938704	chr15:78938704:G:T	rs62013227	G	T	G	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr15	79120056	79120057	chr15:79120057:C:A	rs1521624	C	A	A	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr15	79199793	79199794	chr15:79199794:T:C	rs148471805	T	C	t	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr15	79252494	79252495	chr15:79252495:A:T	rs75733878	A	T	A	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr15	79349527	79349528	chr15:79349528:A:G	rs11855833	A	G	A	Hoxd9_MA0913.1	19	0	+	0	0	.
chr15	79370650	79370651	chr15:79370651:A:G	rs8034762	A	G	A	Hoxd9_MA0913.1	4	1	-	8.287725110553424	4.995590858778444	GTCATAAAAT
chr15	79717906	79717907	chr15:79717907:G:A	rs28744405	G	A	G	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr15	79942671	79942672	chr15:79942672:G:T	rs2733092	G	T	G	Hoxd9_MA0913.1	0	1	+	9.801341972390743	6.764199276437873	GCAATAAAAA
chr15	79942856	79942857	chr15:79942857:A:T	rs79858113	A	T	T	Hoxd9_MA0913.1	6	1	+	9.412035922551908	6.988715975017923	GTAATTAAAA
chr15	80060645	80060646	chr15:80060646:C:T	rs117127218	C	T	C	Hoxd9_MA0913.1	27	0	+	0	0	.
chr15	80061683	80061684	chr15:80061684:A:G	rs12903445	A	G	A	Hoxd9_MA0913.1	27	0	-	0	0	.
chr15	80290550	80290551	chr15:80290551:T:C	rs8031494	T	C	T	Hoxd9_MA0913.1	3	1	-	9.51635951314298	7.688740572647875	GCAATTAAAT
chr15	80462398	80462399	chr15:80462399:G:T	rs12591546	G	T	T	Hoxd9_MA0913.1	0	1	+	8.490366725581566	5.4532240296286965	GTCATTAAAA
chr15	80484251	80484252	chr15:80484252:A:G	rs61144989	A	G	G	Hoxd9_MA0913.1	26	0	-	0	0	.
chr15	80489278	80489279	chr15:80489279:T:G	rs745313807	T	G	T	Hoxd9_MA0913.1	19	0	-	0	0	.
chr15	80714370	80714371	chr15:80714371:C:T	rs2627313	C	T	C	Hoxd9_MA0913.1	0	1	-	8.082713108822833	7.1349793854123735	GCGATTAAAA
chr15	81113395	81113396	chr15:81113396:C:T	rs78890956	C	T	C	Hoxd9_MA0913.1	29	0	+	0	0	.
chr15	81185181	81185182	chr15:81185182:C:G	rs9920793	C	G	G	Hoxd9_MA0913.1	26	0	+	0	0	.
chr15	81206629	81206630	chr15:81206630:T:C	rs1912124	T	C	T	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr15	81294744	81294745	chr15:81294745:A:C	rs17875492	A	C	C	Hoxd9_MA0913.1	9	1	-	8.079531266869532	6.856849963237993	CCAATAAAAT
chr15	81294772	81294773	chr15:81294773:T:G	rs976466445	T	G	T	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr15	81366742	81366743	chr15:81366743:G:A	rs8033908	G	A	G	Hoxd9_MA0913.1	22	0	+	0	0	.
chr15	81532670	81532671	chr15:81532671:T:C	rs35917473	T	C	T	Hoxd9_MA0913.1	21	0	+	0	0	.
chr15	81771023	81771024	chr15:81771024:G:A	rs28526320	G	A	G	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr15	81889589	81889590	chr15:81889590:G:A	rs4778942	G	A	G	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr15	81893506	81893507	chr15:81893507:C:G	rs191201650	C	G	C	Hoxd9_MA0913.1	0	1	-	8.490366725581566	7.012368057198309	GTCATTAAAA
chr15	81931312	81931313	chr15:81931313:C:T	rs4778950	C	T	T	Hoxd9_MA0913.1	29	0	-	0	0	.
chr15	82172839	82172840	chr15:82172840:C:T	rs184209214	C	T	C	Hoxd9_MA0913.1	23	0	-	0	0	.
chr15	82406625	82406626	chr15:82406626:T:C	rs1296928234	T	C	N	Hoxd9_MA0913.1	15	0	-	0	0	.
chr15	82548042	82548043	chr15:82548043:A:G	rs803688	A	G	a	Hoxd9_MA0913.1	13	0	-	0	0	.
chr15	82567009	82567010	chr15:82567010:G:C	rs114116268	G	C	G	Hoxd9_MA0913.1	29	0	+	0	0	.
chr15	82968296	82968297	chr15:82968297:C:G	rs183142561	C	G	c	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr15	83765468	83765469	chr15:83765469:T:C	rs10083569	T	C	C	Hoxd9_MA0913.1	21	0	-	0	0	.
chr15	83767764	83767765	chr15:83767765:A:G	rs12898714	A	G	A	Hoxd9_MA0913.1	27	0	-	0	0	.
chr15	83767799	83767800	chr15:83767800:A:T	rs6602985	A	T	A	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr15	84632508	84632509	chr15:84632509:C:G	rs563360220	C	G	C	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr15	84632509	84632510	chr15:84632510:T:G	rs188739055	T	G	T	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr15	84632518	84632519	chr15:84632519:A:G	rs2292463	A	G	A	Hoxd9_MA0913.1	8	1	+	8.594690316172638	7.021721738714695	GCCATTAAAT
chr15	84793438	84793439	chr15:84793439:T:C	rs12595786	T	C	T	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr15	84821748	84821749	chr15:84821749:C:G	chr15:84821749:C:G	C	G	C	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr15	84950421	84950422	chr15:84950422:C:T	rs78367456	C	T	C	Hoxd9_MA0913.1	1	1	+	8.853608248980283	8.505472621251258	ACAATAAAAA
chr15	85165157	85165158	chr15:85165158:C:T	rs9652519	C	T	C	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr15	85289673	85289674	chr15:85289674:G:A	rs72746747	G	A	g	Hoxd9_MA0913.1	12	0	+	0	0	.
chr15	85395923	85395924	chr15:85395924:T:A	rs28440013	T	A	T	Hoxd9_MA0913.1	5	1	-	7.801678332738202	7.760507910628393	GCAATAAACA
chr15	85521736	85521737	chr15:85521737:A:G	rs3743321	A	G	G	Hoxd9_MA0913.1	22	0	-	0	0	.
chr15	85544661	85544662	chr15:85544662:G:A	rs6496082	G	A	G	Hoxd9_MA0913.1	22	0	-	0	0	.
chr15	85585409	85585410	chr15:85585410:T:A	rs10520594	T	A	T	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr15	85619642	85619643	chr15:85619643:G:A	rs4843086	G	A	G	Hoxd9_MA0913.1	26	0	-	0	0	.
chr15	85642071	85642072	chr15:85642072:C:T	rs416870	C	T	C	Hoxd9_MA0913.1	18	0	+	0	0	.
chr15	85780519	85780520	chr15:85780520:G:A	rs72751891	G	A	G	Hoxd9_MA0913.1	18	0	+	0	0	.
chr15	85825666	85825667	chr15:85825667:G:A	rs4414449	G	A	G	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr15	85860673	85860674	chr15:85860674:C:T	rs114529586	C	T	C	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr15	85897814	85897815	chr15:85897815:C:T	rs117695966	C	T	C	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr15	85929900	85929901	chr15:85929901:A:C	rs11073604	A	C	A	Hoxd9_MA0913.1	29	0	+	0	0	.
chr15	86021940	86021941	chr15:86021941:A:G	rs72748053	A	G	G	Hoxd9_MA0913.1	23	0	-	0	0	.
chr15	86179527	86179528	chr15:86179528:C:T	rs11635258	C	T	C	Hoxd9_MA0913.1	11	0	+	0	0	.
chr15	86237047	86237048	chr15:86237048:A:G	rs35954253	A	G	G	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr15	86516323	86516324	chr15:86516324:T:C	rs2346736	T	C	T	Hoxd9_MA0913.1	21	0	+	0	0	.
chr15	86616045	86616046	chr15:86616046:A:T	rs112461157	A	T	A	Hoxd9_MA0913.1	8	1	+	8.60979621184233	7.131465609813278	ACAATAAAAT
chr15	87036594	87036595	chr15:87036595:T:C	rs2701422	T	C	T	Hoxd9_MA0913.1	4	1	+	7.4131794346509094	4.12104518287593	GCCATAAAAG
chr15	87213306	87213307	chr15:87213307:G:A	rs143545231	G	A	G	Hoxd9_MA0913.1	27	0	+	0	0	.
chr15	87478560	87478561	chr15:87478561:G:A	rs11857551	G	A	G	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr15	87490874	87490875	chr15:87490875:C:T	rs77958216	C	T	C	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr15	87579831	87579832	chr15:87579832:A:G	rs74026859	A	G	A	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr15	87591108	87591109	chr15:87591109:A:C	rs62018977	A	C	A	Hoxd9_MA0913.1	29	0	-	0	0	.
chr15	87591139	87591140	chr15:87591140:C:T	rs7171014	C	T	T	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr15	87618336	87618337	chr15:87618337:G:A	rs4611422	G	A	A	Hoxd9_MA0913.1	1	1	-	9.55752993525279	9.209394307523764	GCAATAAAAT
chr15	87970930	87970931	chr15:87970931:T:G	rs9944243	T	G	T	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr15	88426772	88426773	chr15:88426773:T:C	rs58497814	T	C	C	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr15	88570645	88570646	chr15:88570646:T:C	rs13329353	T	C	T	Hoxd9_MA0913.1	7	1	-	8.323343304007485	1.4841988266531423	CCAATAAAAA
chr15	88609684	88609685	chr15:88609685:C:T	rs113519248	C	T	T	Hoxd9_MA0913.1	18	0	-	0	0	.
chr15	88772278	88772279	chr15:88772279:G:A	rs192836318	G	A	G	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr15	88890662	88890663	chr15:88890663:C:T	rs55687277	C	T	C	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr15	88890675	88890676	chr15:88890676:G:C	rs4932441	G	C	G	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr15	88975200	88975201	chr15:88975201:A:T	rs12899970	A	T	A	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr15	89023882	89023883	chr15:89023883:G:A	rs79412481	G	A	G	Hoxd9_MA0913.1	17	0	-	0	0	.
chr15	89052286	89052287	chr15:89052287:A:G	rs932066	A	G	G	Hoxd9_MA0913.1	25	0	-	0	0	.
chr15	89123502	89123503	chr15:89123503:G:A	rs11638609	G	A	A	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr15	89211632	89211633	chr15:89211633:C:T	rs950540	C	T	C	Hoxd9_MA0913.1	0	1	-	7.306704197962459	6.358970474551999	GCCATAAAGA
chr15	89532132	89532133	chr15:89532133:G:A	rs116949109	G	A	A	Hoxd9_MA0913.1	18	0	+	0	0	.
chr15	89565671	89565672	chr15:89565672:G:A	rs12594211	G	A	G	Hoxd9_MA0913.1	0	1	+	8.329997507299597	7.382263783889136	GTAATTAAAC
chr15	89569269	89569270	chr15:89569270:G:A	rs4485330	G	A	G	Hoxd9_MA0913.1	11	0	-	0	0	.
chr15	89864200	89864201	chr15:89864201:T:C	rs16943673	T	C	T	Hoxd9_MA0913.1	3	1	-	8.879672775420401	7.052053834925298	GCCATAAAAA
chr15	90162824	90162825	chr15:90162825:C:G	rs35781863	C	G	C	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr15	90174936	90174937	chr15:90174937:A:G	rs11855301	A	G	G	Hoxd9_MA0913.1	16	0	+	0	0	.
chr15	90253860	90253861	chr15:90253861:C:T	rs12914775	C	T	C	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr15	90323142	90323143	chr15:90323143:T:C	rs7178701	T	C	T	Hoxd9_MA0913.1	19	0	+	0	0	.
chr15	90335608	90335609	chr15:90335609:T:C	rs11638900	T	C	C	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr15	90358736	90358737	chr15:90358737:C:T	rs16944263	C	T	C	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr15	90380729	90380730	chr15:90380730:G:A	rs76176014	G	A	G	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr15	90400238	90400239	chr15:90400239:G:A	rs8030390	G	A	A	Hoxd9_MA0913.1	1	1	-	8.635860738282448	8.287725110553424	GCCATAAAAT
chr15	90406671	90406672	chr15:90406672:T:G	rs11852549	T	G	T	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr15	90414896	90414897	chr15:90414897:T:G	rs2601203	T	G	G	Hoxd9_MA0913.1	14	0	-	0	0	.
chr15	90414926	90414927	chr15:90414927:G:A	rs772168623	G	A	G	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr15	90420073	90420074	chr15:90420074:G:T	rs80042044	G	T	G	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr15	90873334	90873335	chr15:90873335:C:T	rs80291522	C	T	C	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr15	90873374	90873375	chr15:90873375:T:C	rs1981458	T	C	T	Hoxd9_MA0913.1	27	0	+	0	0	.
chr15	90900687	90900688	chr15:90900688:C:A	rs55935427	C	A	A	Hoxd9_MA0913.1	1	1	+	8.853608248980283	6.433789872955025	ACAATAAAAA
chr15	91047861	91047862	chr15:91047862:C:T	rs7497674	C	T	t	Hoxd9_MA0913.1	23	0	-	0	0	.
chr15	91053166	91053167	chr15:91053167:T:C	rs9920001	T	C	t	Hoxd9_MA0913.1	10	0	-	0	0	.
chr15	91056280	91056281	chr15:91056281:G:A	rs1609450	G	A	g	Hoxd9_MA0913.1	28	0	-	0	0	.
chr15	91142288	91142289	chr15:91142289:T:C	rs17594278	T	C	T	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr15	91142292	91142293	chr15:91142293:T:C	rs72764737	T	C	T	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr15	91256815	91256816	chr15:91256816:T:C	rs1076179	T	C	A	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr15	91279538	91279539	chr15:91279539:T:C	rs112949762	T	C	T	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr15	91409189	91409190	chr15:91409190:A:G	rs140218196	A	G	A	Hoxd9_MA0913.1	9	1	-	8.287725110553424	7.449498732439066	GTCATAAAAT
chr15	91474397	91474398	chr15:91474398:T:C	rs77890182	T	C	C	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr15	91520450	91520451	chr15:91520451:A:G	rs34929728	A	G	G	Hoxd9_MA0913.1	9	1	-	9.51635951314298	8.678133135028622	GCAATTAAAT
chr15	91536527	91536528	chr15:91536528:C:T	rs72756282	C	T	C	Hoxd9_MA0913.1	18	0	-	0	0	.
chr15	91561367	91561368	chr15:91561368:C:G	rs6496831	C	G	G	Hoxd9_MA0913.1	0	1	-	7.3720090125411	5.8940103441578415	GCCATTAAAG
chr15	91664415	91664416	chr15:91664416:A:G	rs7402098	A	G	A	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr15	91754953	91754954	chr15:91754954:G:A	rs4932570	G	A	A	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr15	91845993	91845994	chr15:91845994:A:T	rs28478969	A	T	A	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr15	91890260	91890261	chr15:91890261:G:A	rs11074023	G	A	A	Hoxd9_MA0913.1	26	0	+	0	0	.
chr15	91892876	91892877	chr15:91892877:C:A	rs4267287	C	A	A	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr15	92003181	92003182	chr15:92003182:A:G	rs12593984	A	G	A	Hoxd9_MA0913.1	8	1	-	8.32301137036169	7.801678332738202	GCAATAAATA
chr15	92097828	92097829	chr15:92097829:C:G	chr15:92097829:C:G	C	G	C	Hoxd9_MA0913.1	15	0	-	0	0	.
chr15	92097838	92097839	chr15:92097839:T:C	rs576175296	T	C	T	Hoxd9_MA0913.1	5	1	-	8.853608248980283	2.631945096084414	ACAATAAAAA
chr15	92097851	92097852	chr15:92097852:C:T	rs1036101309	C	T	C	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr15	92160791	92160792	chr15:92160792:A:G	rs147312459	A	G	A	Hoxd9_MA0913.1	9	1	+	8.490366725581566	7.023873384812075	GTCATTAAAA
chr15	92171648	92171649	chr15:92171649:C:T	rs2240589	C	T	C	Hoxd9_MA0913.1	0	1	-	7.984561357794846	7.0368276343843865	GCAATAAAGT
chr15	92331221	92331222	chr15:92331222:G:A	rs12050661	G	A	G	Hoxd9_MA0913.1	28	0	-	0	0	.
chr15	92500031	92500032	chr15:92500032:A:G	rs11856669	A	G	A	Hoxd9_MA0913.1	14	0	+	0	0	.
chr15	92617446	92617447	chr15:92617447:G:A	rs71412554	G	A	G	Hoxd9_MA0913.1	25	0	-	0	0	.
chr15	92866679	92866680	chr15:92866680:C:G	rs11074114	C	G	C	Hoxd9_MA0913.1	10	0	+	0	0	.
chr15	92887932	92887933	chr15:92887933:C:T	rs11074115	C	T	C	Hoxd9_MA0913.1	19	0	+	0	0	.
chr15	92903307	92903308	chr15:92903308:G:C	rs937072271	G	C	G	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr15	92918129	92918130	chr15:92918130:A:G	rs564857425	A	G	A	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr15	92918140	92918141	chr15:92918141:C:G	rs1406714	C	G	G	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr15	93072324	93072325	chr15:93072325:C:T	rs113417002	C	T	C	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr15	93488231	93488232	chr15:93488232:G:A	rs56699134	G	A	G	Hoxd9_MA0913.1	1	1	-	8.079199333223738	7.731063705494713	GCAATAAATT
chr15	93704589	93704590	chr15:93704590:C:T	rs34027089	C	T	C	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr15	93826488	93826489	chr15:93826489:C:T	rs73464071	C	T	C	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr15	93949023	93949024	chr15:93949024:C:A	rs145556964	C	A	C	Hoxd9_MA0913.1	18	0	-	0	0	.
chr15	93980396	93980397	chr15:93980397:C:T	rs117446247	C	T	C	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr15	94232324	94232325	chr15:94232325:A:G	rs372909310	A	G	A	Hoxd9_MA0913.1	28	0	+	0	0	.
chr15	94249109	94249110	chr15:94249110:A:G	rs8025125	A	G	G	Hoxd9_MA0913.1	1	1	-	9.209394307523764	9.55752993525279	GTAATAAAAT
chr15	94277707	94277708	chr15:94277708:T:C	rs28871030	T	C	T	Hoxd9_MA0913.1	5	1	-	8.531537147691377	2.3098739947955087	GTCATAAAAA
chr15	94285236	94285237	chr15:94285237:G:A	rs4984343	G	A	A	Hoxd9_MA0913.1	26	0	-	0	0	.
chr15	94536882	94536883	chr15:94536883:G:A	rs11073367	G	A	G	Hoxd9_MA0913.1	17	0	+	0	0	.
chr15	94621821	94621822	chr15:94621822:T:C	rs1035648	T	C	C	Hoxd9_MA0913.1	11	0	-	0	0	.
chr15	94704218	94704219	chr15:94704219:T:C	rs4143445	T	C	T	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr15	94834642	94834643	chr15:94834643:C:G	rs7165511	C	G	C	Hoxd9_MA0913.1	25	0	+	0	0	.
chr15	94964741	94964742	chr15:94964742:C:G	rs77336521	C	G	C	Hoxd9_MA0913.1	0	1	-	8.719303557138431	7.241304888755173	GCAATAAAAC
chr15	95139614	95139615	chr15:95139615:G:A	rs1458249	G	A	G	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr15	95285307	95285308	chr15:95285308:G:T	rs576874876	G	T	G	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr15	95286294	95286295	chr15:95286295:T:A	rs1994147	T	A	T	Hoxd9_MA0913.1	12	0	+	0	0	.
chr15	95292562	95292563	chr15:95292563:C:G	rs375080475	C	G	C	Hoxd9_MA0913.1	17	0	+	0	0	.
chr15	95409725	95409726	chr15:95409726:A:G	rs11629709	A	G	A	Hoxd9_MA0913.1	25	0	+	0	0	.
chr15	95447572	95447573	chr15:95447573:G:T	rs73466734	G	T	G	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr15	95687243	95687244	chr15:95687244:G:A	rs35544332	G	A	G	Hoxd9_MA0913.1	18	0	-	0	0	.
chr15	95759212	95759213	chr15:95759213:A:G	chr15:95759213:A:G	A	G	A	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr15	96038303	96038304	chr15:96038304:G:A	rs62009467	G	A	G	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr15	96121477	96121478	chr15:96121478:A:G	rs10520813	A	G	A	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr15	96160365	96160366	chr15:96160366:T:C	rs1437587	T	C	T	Hoxd9_MA0913.1	24	0	-	0	0	.
chr15	96181131	96181132	chr15:96181132:C:T	rs1816629	C	T	T	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr15	96297353	96297354	chr15:96297354:G:C	rs4984431	G	C	G	Hoxd9_MA0913.1	1	1	-	7.3720090125411	4.279444000256387	GCCATTAAAG
chr15	96326560	96326561	chr15:96326561:A:G	rs73471283	A	G	A	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr15	96329501	96329502	chr15:96329502:T:C	rs76695729	T	C	T	Hoxd9_MA0913.1	21	0	-	0	0	.
chr15	96474461	96474462	chr15:96474462:A:G	rs181010969	A	G	A	Hoxd9_MA0913.1	12	0	+	0	0	.
chr15	96848633	96848634	chr15:96848634:A:G	rs56026505	A	G	A	Hoxd9_MA0913.1	3	1	+	8.719303557138431	6.891684616643326	GCAATAAAAC
chr15	96882655	96882656	chr15:96882656:T:C	rs57259749	T	C	T	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr15	96897291	96897292	chr15:96897292:G:T	rs1987733	G	T	T	Hoxd9_MA0913.1	0	1	+	7.973723031895638	4.93658033594277	GCAGTAAAAA
chr15	97052706	97052707	chr15:97052707:A:G	rs1106828	A	G	A	Hoxd9_MA0913.1	21	0	-	0	0	.
chr15	97235402	97235403	chr15:97235403:C:T	rs928768853	C	T	C	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr15	97235451	97235452	chr15:97235452:A:T	rs139005914	A	T	A	Hoxd9_MA0913.1	20	0	+	0	0	.
chr15	97640293	97640294	chr15:97640294:T:C	rs75500781	T	C	T	Hoxd9_MA0913.1	22	0	-	0	0	.
chr15	97655095	97655096	chr15:97655096:T:C	rs78723158	T	C	T	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr15	97703579	97703580	chr15:97703580:T:C	rs12593805	T	C	T	Hoxd9_MA0913.1	9	1	+	9.209394307523764	8.371167929409406	GTAATAAAAT
chr15	97760942	97760943	chr15:97760943:C:T	rs2135761	C	T	T	Hoxd9_MA0913.1	12	0	+	0	0	.
chr15	97902936	97902937	chr15:97902937:C:T	rs9920622	C	T	T	Hoxd9_MA0913.1	22	0	-	0	0	.
chr15	97976714	97976715	chr15:97976715:G:C	rs28645929	G	C	G	Hoxd9_MA0913.1	16	0	-	0	0	.
chr15	98000577	98000578	chr15:98000578:G:A	rs189488592	G	A	G	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr15	98076973	98076974	chr15:98076974:A:C	rs56254795	A	C	A	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr15	98080929	98080930	chr15:98080930:T:A	rs11247366	T	A	T	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr15	98101992	98101993	chr15:98101993:G:A	rs11855844	G	A	-	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr15	98139056	98139057	chr15:98139057:A:T	rs4965464	A	T	T	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr15	98139063	98139064	chr15:98139064:G:A	rs7166587	G	A	G	Hoxd9_MA0913.1	0	1	+	8.531537147691377	7.583803424280916	GTCATAAAAA
chr15	98561088	98561089	chr15:98561089:G:T	rs6598523	G	T	T	Hoxd9_MA0913.1	23	0	-	0	0	.
chr15	98561102	98561103	chr15:98561103:C:T	rs6598524	C	T	T	Hoxd9_MA0913.1	9	1	-	8.334848631621252	9.801341972390743	GCAATAAAAG
chr15	98667367	98667368	chr15:98667368:G:C	rs10902605	G	C	C	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr15	98684557	98684558	chr15:98684558:G:A	rs1574213	G	A	G	Hoxd9_MA0913.1	29	0	-	0	0	.
chr15	98769624	98769625	chr15:98769625:A:G	rs2175795	A	G	A	Hoxd9_MA0913.1	21	0	+	0	0	.
chr15	98852942	98852943	chr15:98852943:A:T	rs901424042	A	T	A	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr15	98890494	98890495	chr15:98890495:C:T	rs567514090	C	T	C	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr15	98917632	98917633	chr15:98917633:A:G	rs10048024	A	G	G	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr15	98943654	98943655	chr15:98943655:T:C	rs45571733	T	C	T	Hoxd9_MA0913.1	5	1	-	7.801678332738202	1.5800151798423334	GCAATAAACA
chr15	99077058	99077059	chr15:99077059:C:T	rs115788192	C	T	C	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr15	99224947	99224948	chr15:99224948:C:G	rs28712012	C	G	C	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr15	99286421	99286422	chr15:99286422:C:T	rs140959362	C	T	c	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr15	99304337	99304338	chr15:99304338:G:A	rs34448644	G	A	G	Hoxd9_MA0913.1	22	0	-	0	0	.
chr15	99435981	99435982	chr15:99435982:C:G	rs71403449	C	G	C	Hoxd9_MA0913.1	16	0	-	0	0	.
chr15	99442319	99442320	chr15:99442320:G:A	rs73474892	G	A	G	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr15	99485154	99485155	chr15:99485155:T:C	rs1992485	T	C	T	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr15	99515043	99515044	chr15:99515044:C:T	rs79329596	C	T	C	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr15	99515044	99515045	chr15:99515045:A:G	rs73478500	A	G	A	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr15	100060072	100060073	chr15:100060073:T:A	rs12901866	T	A	T	Hoxd9_MA0913.1	28	0	+	0	0	.
chr15	100252024	100252025	chr15:100252025:G:A	rs79623631	G	A	G	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr15	100330780	100330781	chr15:100330781:T:C	rs117279171	T	C	T	Hoxd9_MA0913.1	23	0	+	0	0	.
chr15	100338467	100338468	chr15:100338468:C:T	rs73485982	C	T	C	Hoxd9_MA0913.1	29	0	+	0	0	.
chr15	100516246	100516247	chr15:100516247:C:A	rs67250115	C	A	A	Hoxd9_MA0913.1	18	0	+	0	0	.
chr15	100757420	100757421	chr15:100757421:A:G	rs4415993	A	G	A	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr15	100782336	100782337	chr15:100782337:A:T	rs11637451	A	T	A	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr15	100833961	100833962	chr15:100833962:C:T	rs11630278	C	T	C	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr15	100931063	100931064	chr15:100931064:T:C	rs73480697	T	C	T	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr15	101031074	101031075	chr15:101031075:T:C	rs7170690	T	C	T	Hoxd9_MA0913.1	26	0	-	0	0	.
chr15	101072337	101072338	chr15:101072338:A:T	rs7179909	A	T	A	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr15	101181005	101181006	chr15:101181006:C:T	rs142134640	C	T	C	Hoxd9_MA0913.1	17	0	+	0	0	.
chr15	101185985	101185986	chr15:101185986:G:A	rs76967748	G	A	A	Hoxd9_MA0913.1	11	0	-	0	0	.
chr15	101267797	101267798	chr15:101267798:T:G	rs540248594	T	G	T	Hoxd9_MA0913.1	24	0	-	0	0	.
chr15	101320655	101320656	chr15:101320656:C:T	rs1307383281	C	T	C	Hoxd9_MA0913.1	10	0	+	0	0	.
chr15	101347346	101347347	chr15:101347347:C:G	rs60289824	C	G	C	Hoxd9_MA0913.1	23	0	+	0	0	.
chr15	101411617	101411618	chr15:101411618:A:C	rs11633098	A	C	C	Hoxd9_MA0913.1	26	0	+	0	0	.
chr15	101455724	101455725	chr15:101455725:C:G	rs74511207	C	G	C	Hoxd9_MA0913.1	17	0	+	0	0	.
chr15	101455732	101455733	chr15:101455733:C:T	chr15:101455733:C:T	C	T	C	Hoxd9_MA0913.1	25	0	+	0	0	.
chr15	101455768	101455769	chr15:101455769:C:T	rs138625095	C	T	C	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr15	101455769	101455770	chr15:101455770:G:A	rs149322227	G	A	G	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr15	101575441	101575442	chr15:101575442:C:T	rs2898893	C	T	T	Hoxd9_MA0913.1	16	0	-	0	0	.
chr15	101654199	101654200	chr15:101654200:T:C	rs520897	T	C	T	Hoxd9_MA0913.1	23	0	+	0	0	.
chr16	293904	293905	chr16:293905:T:C	rs545769	T	C	C	Hoxd9_MA0913.1	25	0	+	0	0	.
chr16	490420	490421	chr16:490421:G:T	rs12917788	G	T	G	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr16	527080	527081	chr16:527081:G:A	rs544801992	G	A	G	Hoxd9_MA0913.1	24	0	-	0	0	.
chr16	713030	713031	chr16:713031:A:C	chr16:713031:A:C	A	C	A	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr16	907884	907885	chr16:907885:A:G	rs4984969	A	G	A	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr16	1109816	1109817	chr16:1109817:C:T	rs60522273	C	T	C	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr16	1253081	1253082	chr16:1253082:C:T	rs4410077	C	T	.	Hoxd9_MA0913.1	29	0	-	0	0	.
chr16	1469887	1469888	chr16:1469888:A:T	rs112570032	A	T	A	Hoxd9_MA0913.1	12	0	+	0	0	.
chr16	1556737	1556738	chr16:1556738:A:G	rs12927247	A	G	A	Hoxd9_MA0913.1	4	1	-	8.531537147691377	5.239402895916397	GTCATAAAAA
chr16	1897014	1897015	chr16:1897015:C:A	rs911391	C	A	C	Hoxd9_MA0913.1	0	1	-	8.281840948251881	5.2446982522990115	GCAATTAATA
chr16	2154833	2154834	chr16:2154834:T:C	rs13242	T	C	T	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr16	2209391	2209392	chr16:2209392:C:G	rs1129185	C	G	C	Hoxd9_MA0913.1	18	0	+	0	0	.
chr16	2649998	2649999	chr16:2649999:C:A	rs11642388	C	A	-	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr16	2758361	2758362	chr16:2758362:C:T	rs3094778	C	T	C	Hoxd9_MA0913.1	23	0	-	0	0	.
chr16	2823510	2823511	chr16:2823511:A:G	rs148081938	A	G	A	Hoxd9_MA0913.1	23	0	+	0	0	.
chr16	3152276	3152277	chr16:3152277:A:T	rs2741894	A	T	A	Hoxd9_MA0913.1	22	0	+	0	0	.
chr16	3236170	3236171	chr16:3236171:A:C	rs76643033	A	C	C	Hoxd9_MA0913.1	14	0	-	0	0	.
chr16	3443101	3443102	chr16:3443102:A:C	rs13332163	A	C	A	Hoxd9_MA0913.1	17	0	+	0	0	.
chr16	3619651	3619652	chr16:3619652:T:C	rs7187466	T	C	C	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr16	3757169	3757170	chr16:3757170:G:A	rs140586932	G	A	G	Hoxd9_MA0913.1	27	0	-	0	0	.
chr16	3943673	3943674	chr16:3943674:C:T	rs2601797	C	T	C	Hoxd9_MA0913.1	28	0	-	0	0	.
chr16	3962478	3962479	chr16:3962479:T:C	rs62036942	T	C	T	Hoxd9_MA0913.1	18	0	+	0	0	.
chr16	4096693	4096694	chr16:4096694:A:G	rs442611	A	G	A	Hoxd9_MA0913.1	5	1	+	7.801678332738202	1.5800151798423334	GCAATAAACA
chr16	4101997	4101998	chr16:4101998:T:G	rs437187	T	G	G	Hoxd9_MA0913.1	3	1	-	9.453206344661718	4.986975674261663	GTAATAAAAA
chr16	4699913	4699914	chr16:4699914:C:G	rs841212	C	G	.	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr16	4972048	4972049	chr16:4972049:G:A	rs9929700	G	A	A	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr16	4972312	4972313	chr16:4972313:G:T	rs9929954	G	T	T	Hoxd9_MA0913.1	11	0	-	0	0	.
chr16	4976482	4976483	chr16:4976483:T:C	rs7191632	T	C	C	Hoxd9_MA0913.1	9	1	+	9.55752993525279	8.719303557138431	GCAATAAAAT
chr16	5109235	5109236	chr16:5109236:G:A	rs4047474	G	A	g	Hoxd9_MA0913.1	21	0	-	0	0	.
chr16	5185854	5185855	chr16:5185855:T:C	rs60096950	T	C	T	Hoxd9_MA0913.1	5	1	-	8.719303557138431	2.4976404042425617	GCAATAAAAC
chr16	5432483	5432484	chr16:5432484:G:A	rs500169	G	A	G	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr16	5537610	5537611	chr16:5537611:C:T	rs8058410	C	T	C	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr16	5647393	5647394	chr16:5647394:T:C	rs12934235	T	C	T	Hoxd9_MA0913.1	5	1	-	8.079199333223738	1.857536180327869	GCAATAAATT
chr16	5871820	5871821	chr16:5871821:G:A	rs58623200	G	A	G	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr16	6345366	6345367	chr16:6345367:A:C	rs1420033	A	C	A	Hoxd9_MA0913.1	1	1	-	9.412035922551908	6.667606537996219	GTAATTAAAA
chr16	6682182	6682183	chr16:6682183:G:C	rs78034254	G	C	G	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr16	6728688	6728689	chr16:6728689:T:C	rs12921288	T	C	T	Hoxd9_MA0913.1	17	0	+	0	0	.
chr16	6846647	6846648	chr16:6846648:A:G	rs6500852	A	G	A	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr16	6892983	6892984	chr16:6892984:T:C	rs59592484	T	C	T	Hoxd9_MA0913.1	3	1	-	9.760171550280933	7.932552609785828	GCAATTAAAA
chr16	6997476	6997477	chr16:6997477:T:C	rs7191667	T	C	T	Hoxd9_MA0913.1	19	0	+	0	0	.
chr16	7035748	7035749	chr16:7035749:G:C	rs76611178	G	C	G	Hoxd9_MA0913.1	26	0	+	0	0	.
chr16	7396470	7396471	chr16:7396471:G:A	rs8050740	G	A	A	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr16	7471465	7471466	chr16:7471466:C:G	chr16:7471466:C:G	C	G	C	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr16	7561970	7561971	chr16:7561971:G:C	rs12932136	G	C	G	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr16	7616968	7616969	chr16:7616969:C:A	rs9935836	C	A	A	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr16	7646688	7646689	chr16:7646689:A:G	rs112717264	A	G	A	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr16	7748492	7748493	chr16:7748493:T:C	rs75556508	T	C	C	Hoxd9_MA0913.1	8	1	+	8.32301137036169	7.801678332738202	GCAATAAATA
chr16	7843945	7843946	chr16:7843946:C:G	rs62019988	C	G	C	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr16	7964495	7964496	chr16:7964496:A:G	rs62018785	A	G	G	Hoxd9_MA0913.1	28	0	+	0	0	.
chr16	7983480	7983481	chr16:7983481:A:C	rs1507039	A	C	C	Hoxd9_MA0913.1	16	0	-	0	0	.
chr16	8044269	8044270	chr16:8044270:G:C	rs11641562	G	C	G	Hoxd9_MA0913.1	0	1	+	9.55752993525279	8.079531266869532	GCAATAAAAT
chr16	8075581	8075582	chr16:8075582:C:T	rs1911494	C	T	C	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr16	8230536	8230537	chr16:8230537:C:T	rs35197921	C	T	C	Hoxd9_MA0913.1	29	0	+	0	0	.
chr16	8249209	8249210	chr16:8249210:C:T	rs9302865	C	T	T	Hoxd9_MA0913.1	19	0	+	0	0	.
chr16	8447260	8447261	chr16:8447261:G:A	rs8062116	G	A	G	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr16	8483427	8483428	chr16:8483428:G:A	rs9932124	G	A	G	Hoxd9_MA0913.1	0	1	+	9.412035922551908	8.464302199141448	GTAATTAAAA
chr16	8512758	8512759	chr16:8512759:T:C	rs75063836	T	C	C	Hoxd9_MA0913.1	10	0	+	0	0	.
chr16	8728982	8728983	chr16:8728983:C:G	rs4984997	C	G	G	Hoxd9_MA0913.1	25	0	+	0	0	.
chr16	8791908	8791909	chr16:8791909:C:G	rs532640580	C	G	C	Hoxd9_MA0913.1	15	0	-	0	0	.
chr16	8791934	8791935	chr16:8791935:G:A	rs72766359	G	A	G	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr16	8804600	8804601	chr16:8804601:A:G	rs8053440	A	G	A	Hoxd9_MA0913.1	12	0	+	0	0	.
chr16	8849340	8849341	chr16:8849341:C:G	rs74008088	C	G	T	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr16	8890411	8890412	chr16:8890412:C:T	rs30781	C	T	T	Hoxd9_MA0913.1	23	0	+	0	0	.
chr16	8923491	8923492	chr16:8923492:T:C	rs55678416	T	C	T	Hoxd9_MA0913.1	25	0	-	0	0	.
chr16	9062321	9062322	chr16:9062322:T:C	rs79962337	T	C	T	Hoxd9_MA0913.1	24	0	-	0	0	.
chr16	9072688	9072689	chr16:9072689:T:C	rs78463824	T	C	T	Hoxd9_MA0913.1	13	0	-	0	0	.
chr16	9077470	9077471	chr16:9077471:A:T	rs118155709	A	T	a	Hoxd9_MA0913.1	4	1	-	9.51635951314298	6.829108088956822	GCAATTAAAT
chr16	9077486	9077487	chr16:9077487:C:T	rs186753568	C	T	C	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr16	9259129	9259130	chr16:9259130:A:C	rs2941354	A	C	A	Hoxd9_MA0913.1	28	0	+	0	0	.
chr16	9373953	9373954	chr16:9373954:G:A	rs171603	G	A	A	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr16	9428802	9428803	chr16:9428803:A:G	rs16965238	A	G	A	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr16	9519451	9519452	chr16:9519452:A:C	rs4781339	A	C	A	Hoxd9_MA0913.1	28	0	+	0	0	.
chr16	9661623	9661624	chr16:9661624:G:C	rs17568440	G	C	C	Hoxd9_MA0913.1	12	0	-	0	0	.
chr16	10001645	10001646	chr16:10001646:C:T	rs8043728	C	T	T	Hoxd9_MA0913.1	22	0	+	0	0	.
chr16	10263223	10263224	chr16:10263224:G:C	rs10852285	G	C	C	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr16	10332270	10332271	chr16:10332271:A:G	rs11649065	A	G	a	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr16	10521814	10521815	chr16:10521815:G:A	rs77236618	G	A	G	Hoxd9_MA0913.1	25	0	-	0	0	.
chr16	10610842	10610843	chr16:10610843:T:C	rs12149191	T	C	T	Hoxd9_MA0913.1	11	0	-	0	0	.
chr16	10723926	10723927	chr16:10723927:T:C	rs547049038	T	C	T	Hoxd9_MA0913.1	26	0	-	0	0	.
chr16	10723954	10723955	chr16:10723955:G:A	rs1641786	G	A	G	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr16	10741259	10741260	chr16:10741260:T:C	rs2697649	T	C	T	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr16	10755398	10755399	chr16:10755399:A:G	rs191632392	A	G	A	Hoxd9_MA0913.1	22	0	-	0	0	.
chr16	10759196	10759197	chr16:10759197:T:C	rs1641769	T	C	T	Hoxd9_MA0913.1	24	0	+	0	0	.
chr16	10956435	10956436	chr16:10956436:C:G	rs796438744	C	G	C	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr16	11038775	11038776	chr16:11038776:G:T	rs720130	G	T	T	Hoxd9_MA0913.1	20	0	-	0	0	.
chr16	11079267	11079268	chr16:11079268:T:G	rs376779554	T	G	T	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr16	11276740	11276741	chr16:11276741:C:G	rs8060767	C	G	C	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr16	11295351	11295352	chr16:11295352:A:T	rs143781526	A	T	A	Hoxd9_MA0913.1	5	1	-	8.187202972822991	8.2283733949328	GCAATTAAGA
chr16	11295369	11295370	chr16:11295370:G:C	rs148138217	G	C	G	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr16	11307621	11307622	chr16:11307622:C:T	rs72773814	C	T	C	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr16	11354062	11354063	chr16:11354063:C:T	rs72773860	C	T	C	Hoxd9_MA0913.1	24	0	-	0	0	.
chr16	11370742	11370743	chr16:11370743:T:G	rs28660409	T	G	T	Hoxd9_MA0913.1	17	0	-	0	0	.
chr16	11379798	11379799	chr16:11379799:T:C	rs7203055	T	C	T	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr16	11388390	11388391	chr16:11388391:C:T	rs4638601	C	T	C	Hoxd9_MA0913.1	12	0	-	0	0	.
chr16	11390872	11390873	chr16:11390873:C:A	rs11646230	C	A	C	Hoxd9_MA0913.1	28	0	+	0	0	.
chr16	11394068	11394069	chr16:11394069:G:T	rs12599081	G	T	T	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr16	11407815	11407816	chr16:11407816:T:A	rs13334607	T	A	T	Hoxd9_MA0913.1	2	1	-	9.209394307523764	2.759050275672983	GTAATAAAAT
chr16	11407817	11407818	chr16:11407818:C:T	rs8056381	C	T	T	Hoxd9_MA0913.1	0	1	-	9.209394307523764	8.261660584113304	GTAATAAAAT
chr16	11407827	11407828	chr16:11407828:C:T	rs909749545	C	T	C	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr16	11429788	11429789	chr16:11429789:T:A	rs8045454	T	A	A	Hoxd9_MA0913.1	10	0	+	0	0	.
chr16	11527513	11527514	chr16:11527514:G:A	rs12596332	G	A	G	Hoxd9_MA0913.1	15	0	-	0	0	.
chr16	11592070	11592071	chr16:11592071:C:T	rs8054395	C	T	C	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr16	11687725	11687726	chr16:11687726:A:C	rs12920377	A	C	A	Hoxd9_MA0913.1	2	1	+	8.568625789732518	7.646956592762177	ACAATTAAAT
chr16	11745469	11745470	chr16:11745470:G:T	rs4780401	G	T	T	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr16	11800197	11800198	chr16:11800198:A:T	rs2160184	A	T	A	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr16	11980864	11980865	chr16:11980865:A:G	rs370374	A	G	A	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr16	11994635	11994636	chr16:11994636:A:G	rs16958833	A	G	A	Hoxd9_MA0913.1	24	0	-	0	0	.
chr16	12081415	12081416	chr16:12081416:A:G	rs62038867	A	G	A	Hoxd9_MA0913.1	29	0	-	0	0	.
chr16	12158513	12158514	chr16:12158514:C:T	rs937965	C	T	C	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr16	12188402	12188403	chr16:12188403:G:A	rs995045260	G	A	G	Hoxd9_MA0913.1	1	1	-	8.838502353310592	8.490366725581566	GCCATTAAAA
chr16	12215824	12215825	chr16:12215825:C:T	rs830726	C	T	C	Hoxd9_MA0913.1	25	0	-	0	0	.
chr16	12315534	12315535	chr16:12315535:G:A	rs209851	G	A	G	Hoxd9_MA0913.1	0	1	+	7.839067345093966	6.891333621683506	GTAATTAAGA
chr16	12345512	12345513	chr16:12345513:T:C	rs4781207	T	C	C	Hoxd9_MA0913.1	20	0	-	0	0	.
chr16	12359051	12359052	chr16:12359052:T:C	rs11645864	T	C	C	Hoxd9_MA0913.1	2	1	-	9.55752993525279	7.8800714937946905	GCAATAAAAT
chr16	12398275	12398276	chr16:12398276:C:T	rs8055030	C	T	C	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr16	12473890	12473891	chr16:12473891:G:A	rs7190324	G	A	A	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr16	12547657	12547658	chr16:12547658:A:G	rs8062234	A	G	G	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr16	12547691	12547692	chr16:12547692:G:A	rs35957798	G	A	G	Hoxd9_MA0913.1	21	0	+	0	0	.
chr16	12628589	12628590	chr16:12628590:G:A	rs4353467	G	A	G	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr16	12673768	12673769	chr16:12673769:G:A	rs938901	G	A	G	Hoxd9_MA0913.1	17	0	+	0	0	.
chr16	12755963	12755964	chr16:12755964:C:T	rs8056128	C	T	T	Hoxd9_MA0913.1	1	1	+	8.323343304007485	7.97520767627846	CCAATAAAAA
chr16	12818142	12818143	chr16:12818143:T:C	rs9302491	T	C	C	Hoxd9_MA0913.1	19	0	+	0	0	.
chr16	12971669	12971670	chr16:12971670:G:A	rs11075176	G	A	A	Hoxd9_MA0913.1	20	0	-	0	0	.
chr16	12992681	12992682	chr16:12992682:C:T	rs80076274	C	T	C	Hoxd9_MA0913.1	13	0	-	0	0	.
chr16	13112745	13112746	chr16:13112746:A:G	rs75044146	A	G	G	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr16	13127789	13127790	chr16:13127790:A:T	rs28406687	A	T	A	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr16	13471716	13471717	chr16:13471717:A:G	rs2078548	A	G	a	Hoxd9_MA0913.1	25	0	-	0	0	.
chr16	13781505	13781506	chr16:13781506:T:C	rs16962879	T	C	T	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr16	14015984	14015985	chr16:14015985:T:C	rs72783404	T	C	T	Hoxd9_MA0913.1	8	1	-	8.678133135028622	7.105164557570679	GCAATTAAAC
chr16	15519015	15519016	chr16:15519016:T:G	rs529281264	T	G	T	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr16	15702265	15702266	chr16:15702266:A:T	rs62029304	A	T	A	Hoxd9_MA0913.1	15	0	-	0	0	.
chr16	15815462	15815463	chr16:15815463:A:G	rs62030627	A	G	A	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr16	15947910	15947911	chr16:15947911:G:A	rs4148330	G	A	G	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr16	16812704	16812705	chr16:16812705:T:G	rs80087794	T	G	.	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr16	17131581	17131582	chr16:17131582:A:C	rs1042405222	A	C	A	Hoxd9_MA0913.1	2	1	+	9.55752993525279	8.635860738282448	GCAATAAAAT
chr16	17225690	17225691	chr16:17225691:C:A	rs74010746	C	A	C	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr16	17237538	17237539	chr16:17237539:A:G	rs113025605	A	G	A	Hoxd9_MA0913.1	6	1	+	8.329997507299597	1.5145768395202555	GTAATTAAAC
chr16	17245643	17245644	chr16:17245644:T:C	rs1379655	T	C	T	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr16	17341732	17341733	chr16:17341733:A:G	rs4782000	A	G	G	Hoxd9_MA0913.1	9	1	-	8.568625789732518	7.73039941161816	ACAATTAAAT
chr16	17390038	17390039	chr16:17390039:T:C	rs8049884	T	C	C	Hoxd9_MA0913.1	25	0	+	0	0	.
chr16	17458130	17458131	chr16:17458131:C:G	rs75975884	C	G	C	Hoxd9_MA0913.1	26	0	-	0	0	.
chr16	17619545	17619546	chr16:17619546:G:A	rs7201964	G	A	A	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr16	17683405	17683406	chr16:17683406:T:A	rs8048263	T	A	t	Hoxd9_MA0913.1	21	0	+	0	0	.
chr16	17969299	17969300	chr16:17969300:T:G	rs367898840	T	G	T	Hoxd9_MA0913.1	1	1	+	9.412035922551908	6.667606537996219	GTAATTAAAA
chr16	18118992	18118993	chr16:18118993:G:A	rs74476741	G	A	g	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr16	18866797	18866798	chr16:18866798:T:C	rs11648912	T	C	-	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr16	18932884	18932885	chr16:18932885:G:A	chr16:18932885:G:A	G	A	g	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr16	18984568	18984569	chr16:18984569:T:C	rs74014425	T	C	t	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr16	19019305	19019306	chr16:19019306:A:G	rs9926513	A	G	A	Hoxd9_MA0913.1	28	0	-	0	0	.
chr16	19019321	19019322	chr16:19019322:A:G	rs74014430	A	G	A	Hoxd9_MA0913.1	12	0	-	0	0	.
chr16	19067502	19067503	chr16:19067503:G:T	rs116281108	G	T	G	Hoxd9_MA0913.1	23	0	+	0	0	.
chr16	19375600	19375601	chr16:19375601:T:C	rs74412750	T	C	T	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr16	19389476	19389477	chr16:19389477:A:C	rs114339084	A	C	C	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr16	19389477	19389478	chr16:19389478:G:A	rs558685145	G	A	G	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr16	19411482	19411483	chr16:19411483:A:C	rs2285046	A	C	C	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr16	19433657	19433658	chr16:19433658:G:C	rs12597885	G	C	C	Hoxd9_MA0913.1	1	1	-	9.801341972390743	6.7087769601060305	GCAATAAAAA
chr16	19696178	19696179	chr16:19696179:C:T	rs116281589	C	T	C	Hoxd9_MA0913.1	22	0	-	0	0	.
chr16	19708188	19708189	chr16:19708189:C:T	rs768757015	C	T	C	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr16	19761814	19761815	chr16:19761815:G:A	rs150461419	G	A	G	Hoxd9_MA0913.1	0	1	+	8.371167929409406	7.423434205998946	GTAATAAAAC
chr16	19831624	19831625	chr16:19831625:G:A	rs1292635	G	A	G	Hoxd9_MA0913.1	18	0	+	0	0	.
chr16	20173194	20173195	chr16:20173195:G:A	rs28645474	G	A	A	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr16	20300869	20300870	chr16:20300870:G:T	rs9933126	G	T	g	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr16	20905080	20905081	chr16:20905081:C:A	rs17692345	C	A	c	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr16	20911041	20911042	chr16:20911042:G:T	rs141878324	G	T	g	Hoxd9_MA0913.1	11	0	-	0	0	.
chr16	20931624	20931625	chr16:20931625:A:G	rs960658143	A	G	A	Hoxd9_MA0913.1	21	0	+	0	0	.
chr16	21076173	21076174	chr16:21076174:G:A	rs2639781	G	A	G	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr16	21085228	21085229	chr16:21085229:C:T	rs9929992	C	T	-	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr16	21103981	21103982	chr16:21103982:C:T	rs72780863	C	T	c	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr16	21514390	21514391	chr16:21514391:T:C	chr16:21514391:T:C	T	C	.	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr16	21625178	21625179	chr16:21625179:G:C	rs2305520	G	C	G	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr16	21716807	21716808	chr16:21716808:G:T	rs215904	G	T	g	Hoxd9_MA0913.1	18	0	-	0	0	.
chr16	22030497	22030498	chr16:22030498:A:G	rs9935825	A	G	A	Hoxd9_MA0913.1	3	1	+	8.568625789732518	6.741006849237415	ACAATTAAAT
chr16	22189913	22189914	chr16:22189914:G:A	rs9938607	G	A	G	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr16	22189927	22189928	chr16:22189928:A:C	chr16:22189928:A:C	A	C	A	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr16	22212149	22212150	chr16:22212150:A:G	rs76847256	A	G	A	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr16	22212187	22212188	chr16:22212188:T:C	rs754290	T	C	C	Hoxd9_MA0913.1	20	0	+	0	0	.
chr16	22638746	22638747	chr16:22638747:G:A	rs989112406	G	A	G	Hoxd9_MA0913.1	0	1	+	9.801341972390743	8.853608248980283	GCAATAAAAA
chr16	22666944	22666945	chr16:22666945:G:A	rs144744457	G	A	C	Hoxd9_MA0913.1	10	0	-	0	0	.
chr16	22666953	22666954	chr16:22666954:G:A	rs866654380	G	A	G	Hoxd9_MA0913.1	1	1	-	9.801341972390743	9.453206344661718	GCAATAAAAA
chr16	22686546	22686547	chr16:22686547:G:A	rs148668990	G	A	G	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr16	23121223	23121224	chr16:23121224:C:T	rs6497651	C	T	C	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr16	23404394	23404395	chr16:23404395:A:T	rs118164971	A	T	A	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr16	23641314	23641315	chr16:23641315:C:G	rs138200248	C	G	C	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr16	23803223	23803224	chr16:23803224:C:T	rs34214094	C	T	C	Hoxd9_MA0913.1	1	1	+	9.760171550280933	9.412035922551908	GCAATTAAAA
chr16	23901803	23901804	chr16:23901804:T:C	rs10444991	T	C	C	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr16	24142592	24142593	chr16:24142593:G:C	rs23555	G	C	C	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr16	24721819	24721820	chr16:24721820:A:G	rs200541	A	G	G	Hoxd9_MA0913.1	8	1	+	9.801341972390743	8.2283733949328	GCAATAAAAA
chr16	24813504	24813505	chr16:24813505:C:T	rs28538643	C	T	C	Hoxd9_MA0913.1	17	0	-	0	0	.
chr16	24838196	24838197	chr16:24838197:C:T	rs28493028	C	T	C	Hoxd9_MA0913.1	2	1	+	8.490366725581566	2.9616918907011263	GTCATTAAAA
chr16	24838212	24838213	chr16:24838213:C:T	rs62032809	C	T	C	Hoxd9_MA0913.1	18	0	+	0	0	.
chr16	25049916	25049917	chr16:25049917:T:C	rs1978627	T	C	C	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr16	25190148	25190149	chr16:25190149:G:A	rs2881053	G	A	G	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr16	25289157	25289158	chr16:25289158:C:T	rs1895366	C	T	C	Hoxd9_MA0913.1	19	0	+	0	0	.
chr16	25445225	25445226	chr16:25445226:T:C	rs1034599	T	C	T	Hoxd9_MA0913.1	12	0	-	0	0	.
chr16	25773276	25773277	chr16:25773277:T:G	rs11862584	T	G	T	Hoxd9_MA0913.1	11	0	-	0	0	.
chr16	25933222	25933223	chr16:25933223:C:T	rs117559033	C	T	C	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr16	25971266	25971267	chr16:25971267:A:G	rs56077551	A	G	A	Hoxd9_MA0913.1	14	0	+	0	0	.
chr16	26087121	26087122	chr16:26087122:T:C	rs7199218	T	C	T	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr16	26087132	26087133	chr16:26087133:A:T	rs7197687	A	T	A	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr16	26722715	26722716	chr16:26722716:G:T	rs73531306	G	T	G	Hoxd9_MA0913.1	29	0	-	0	0	.
chr16	26840981	26840982	chr16:26840982:T:C	rs57566343	T	C	T	Hoxd9_MA0913.1	25	0	+	0	0	.
chr16	27107405	27107406	chr16:27107406:G:C	rs35781406	G	C	G	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr16	27138564	27138565	chr16:27138565:C:T	rs72788016	C	T	-	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr16	27152978	27152979	chr16:27152979:A:C	rs80047289	A	C	A	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr16	27547237	27547238	chr16:27547238:G:C	rs4787967	G	C	G	Hoxd9_MA0913.1	28	0	-	0	0	.
chr16	27693679	27693680	chr16:27693680:C:T	rs148055508	C	T	C	Hoxd9_MA0913.1	26	0	-	0	0	.
chr16	27798179	27798180	chr16:27798180:A:G	rs9931266	A	G	A	Hoxd9_MA0913.1	3	1	+	8.812437826870472	6.984818886375368	ACAATTAAAA
chr16	27812631	27812632	chr16:27812632:G:A	rs79989774	G	A	G	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr16	27840192	27840193	chr16:27840193:C:G	rs1709791	C	G	C	Hoxd9_MA0913.1	23	0	-	0	0	.
chr16	27976458	27976459	chr16:27976459:C:G	rs12927375	C	G	c	Hoxd9_MA0913.1	23	0	+	0	0	.
chr16	28004308	28004309	chr16:28004309:C:T	chr16:28004309:C:T	C	T	C	Hoxd9_MA0913.1	0	1	-	8.678133135028622	7.73039941161816	GCAATTAAAC
chr16	28064979	28064980	chr16:28064980:T:C	rs34365541	T	C	T	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr16	28278050	28278051	chr16:28278051:C:T	chr16:28278051:C:T	C	T	C	Hoxd9_MA0913.1	15	0	+	0	0	.
chr16	28607592	28607593	chr16:28607593:T:A	rs3020803	T	A	.	Hoxd9_MA0913.1	5	1	-	8.853608248980283	8.812437826870472	ACAATAAAAA
chr16	29143974	29143975	chr16:29143975:C:T	rs74582532	C	T	.	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr16	29288852	29288853	chr16:29288853:A:G	rs796670392	A	G	.	Hoxd9_MA0913.1	7	1	+	8.719303557138431	1.8801590797840877	GCAATAAAAC
chr16	29318807	29318808	chr16:29318808:G:A	rs140493615	G	A	.	Hoxd9_MA0913.1	2	1	-	7.890768629900132	2.3620937950196907	ACCATTAAAA
chr16	29661881	29661882	chr16:29661882:T:C	rs3764276	T	C	.	Hoxd9_MA0913.1	14	0	+	0	0	.
chr16	29710528	29710529	chr16:29710529:C:T	chr16:29710529:C:T	C	T	c	Hoxd9_MA0913.1	1	1	+	9.801341972390743	9.453206344661718	GCAATAAAAA
chr16	29710539	29710540	chr16:29710540:C:T	rs754463469	C	T	C	Hoxd9_MA0913.1	12	0	+	0	0	.
chr16	29710542	29710543	chr16:29710543:T:G	rs1633810	T	G	T	Hoxd9_MA0913.1	15	0	+	0	0	.
chr16	29863466	29863467	chr16:29863467:C:A	rs956531805	C	A	C	Hoxd9_MA0913.1	14	0	+	0	0	.
chr16	29871168	29871169	chr16:29871169:C:T	rs12917712	C	T	T	Hoxd9_MA0913.1	17	0	-	0	0	.
chr16	29949271	29949272	chr16:29949272:T:C	rs4788195	T	C	T	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr16	30124450	30124451	chr16:30124451:A:G	rs118133244	A	G	.	Hoxd9_MA0913.1	20	0	+	0	0	.
chr16	30377964	30377965	chr16:30377965:T:A	rs1447697504	T	A	T	Hoxd9_MA0913.1	4	1	+	8.079531266869532	5.392279842683375	CCAATAAAAT
chr16	30473293	30473294	chr16:30473294:G:A	rs34385374	G	A	G	Hoxd9_MA0913.1	19	0	+	0	0	.
chr16	30806758	30806759	chr16:30806759:T:C	rs1042187488	T	C	T	Hoxd9_MA0913.1	7	1	-	8.323343304007485	1.4841988266531423	CCAATAAAAA
chr16	31191928	31191929	chr16:31191929:T:G	rs73530293	T	G	G	Hoxd9_MA0913.1	23	0	-	0	0	.
chr16	31248231	31248232	chr16:31248232:G:A	rs4561481	G	A	A	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr16	31262208	31262209	chr16:31262209:T:A	rs7196256	T	A	A	Hoxd9_MA0913.1	15	0	-	0	0	.
chr16	31386906	31386907	chr16:31386907:G:A	rs145988221	G	A	G	Hoxd9_MA0913.1	13	0	+	0	0	.
chr16	31453967	31453968	chr16:31453968:G:A	rs576648880	G	A	A	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr16	32474600	32474601	chr16:32474601:G:T	rs74017572	G	T	.	Hoxd9_MA0913.1	15	0	-	0	0	.
chr16	33028929	33028930	chr16:33028930:G:A	rs763822015	G	A	g	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr16	34590874	34590875	chr16:34590875:C:G	rs71209242	C	G	.	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr16	35694534	35694535	chr16:35694535:A:G	rs11863543	A	G	g	Hoxd9_MA0913.1	6	1	+	8.282172881897674	1.4667522141183342	CCAATTAAAA
chr16	46687849	46687850	chr16:46687850:T:C	rs78674672	T	C	T	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr16	46937218	46937219	chr16:46937219:G:A	rs890777908	G	A	G	Hoxd9_MA0913.1	24	0	+	0	0	.
chr16	48720579	48720580	chr16:48720580:C:T	rs1420720	C	T	T	Hoxd9_MA0913.1	0	1	-	9.168223885413955	8.220490162003495	GTAATTAAAT
chr16	48860417	48860418	chr16:48860418:A:C	rs1362588	A	C	C	Hoxd9_MA0913.1	0	1	+	7.890768629900132	7.360503684927334	ACCATTAAAA
chr16	49051737	49051738	chr16:49051738:T:C	rs1420601	T	C	C	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr16	49051738	49051739	chr16:49051739:G:T	rs1420600	G	T	G	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr16	49182022	49182023	chr16:49182023:C:T	rs4090562	C	T	C	Hoxd9_MA0913.1	0	1	-	7.557866295600249	6.610132572189789	GCAATAAACT
chr16	49475017	49475018	chr16:49475018:G:C	rs74737709	G	C	g	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr16	49508283	49508284	chr16:49508284:G:A	rs8051471	G	A	G	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr16	49884311	49884312	chr16:49884312:G:A	rs28547052	G	A	G	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr16	49913926	49913927	chr16:49913927:C:T	rs73578168	C	T	C	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr16	50077530	50077531	chr16:50077531:T:C	rs72796146	T	C	T	Hoxd9_MA0913.1	21	0	+	0	0	.
chr16	50118112	50118113	chr16:50118113:C:A	rs7187320	C	A	c	Hoxd9_MA0913.1	11	0	-	0	0	.
chr16	50745983	50745984	chr16:50745984:C:T	rs7195766	C	T	T	Hoxd9_MA0913.1	0	1	-	9.801341972390743	8.853608248980283	GCAATAAAAA
chr16	50839791	50839792	chr16:50839792:T:C	rs16948923	T	C	T	Hoxd9_MA0913.1	3	1	-	8.60979621184233	6.782177271347225	ACAATAAAAT
chr16	50997276	50997277	chr16:50997277:C:T	rs62028333	C	T	C	Hoxd9_MA0913.1	19	0	-	0	0	.
chr16	50997964	50997965	chr16:50997965:G:A	rs12599586	G	A	g	Hoxd9_MA0913.1	10	0	-	0	0	.
chr16	51113119	51113120	chr16:51113120:G:A	rs8047768	G	A	A	Hoxd9_MA0913.1	14	0	-	0	0	.
chr16	51255681	51255682	chr16:51255682:T:G	rs7185437	T	G	T	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr16	51721459	51721460	chr16:51721460:C:T	rs12927956	C	T	C	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr16	51734163	51734164	chr16:51734164:C:A	rs1564003	C	A	A	Hoxd9_MA0913.1	21	0	+	0	0	.
chr16	52569115	52569116	chr16:52569116:C:T	rs3104751	C	T	T	Hoxd9_MA0913.1	22	0	+	0	0	.
chr16	52645992	52645993	chr16:52645993:A:G	rs3104826	A	G	G	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr16	52646605	52646606	chr16:52646606:G:C	rs3104828	G	C	C	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr16	52709112	52709113	chr16:52709113:C:A	rs4572397	C	A	C	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr16	52769427	52769428	chr16:52769428:A:G	rs188289306	A	G	A	Hoxd9_MA0913.1	28	0	-	0	0	.
chr16	52790322	52790323	chr16:52790323:A:G	rs8055491	A	G	A	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr16	53019085	53019086	chr16:53019086:C:G	rs34470004	C	G	G	Hoxd9_MA0913.1	12	0	-	0	0	.
chr16	53147718	53147719	chr16:53147719:A:G	rs79243132	A	G	A	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr16	53160029	53160030	chr16:53160030:A:C	chr16:53160030:A:C	A	C	A	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr16	53160040	53160041	chr16:53160041:A:G	rs73599583	A	G	A	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr16	53611481	53611482	chr16:53611482:T:C	rs2241179	T	C	C	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr16	53971307	53971308	chr16:53971308:A:G	rs144526321	A	G	A	Hoxd9_MA0913.1	23	0	-	0	0	.
chr16	54016567	54016568	chr16:54016568:T:C	rs1990686	T	C	T	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr16	54061952	54061953	chr16:54061953:C:T	rs1558687	C	T	c	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr16	54236744	54236745	chr16:54236745:T:C	rs17253388	T	C	T	Hoxd9_MA0913.1	14	0	-	0	0	.
chr16	54503966	54503967	chr16:54503967:C:T	rs147233517	C	T	C	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr16	54553873	54553874	chr16:54553874:A:G	rs8062083	A	G	G	Hoxd9_MA0913.1	4	1	-	8.60979621184233	5.317661960067349	ACAATAAAAT
chr16	54697063	54697064	chr16:54697064:G:A	rs567226118	G	A	G	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr16	54739683	54739684	chr16:54739684:T:C	rs8050695	T	C	C	Hoxd9_MA0913.1	25	0	-	0	0	.
chr16	55284299	55284300	chr16:55284300:C:T	rs16954669	C	T	C	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr16	55284477	55284478	chr16:55284478:A:G	rs67317227	A	G	A	Hoxd9_MA0913.1	12	0	+	0	0	.
chr16	55427285	55427286	chr16:55427286:G:A	rs1437248	G	A	G	Hoxd9_MA0913.1	18	0	-	0	0	.
chr16	55572447	55572448	chr16:55572448:A:G	rs4783896	A	G	A	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr16	55825006	55825007	chr16:55825007:C:G	rs139869376	C	G	C	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr16	55909554	55909555	chr16:55909555:A:T	rs72810532	A	T	T	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr16	56090952	56090953	chr16:56090953:C:A	rs139728055	C	A	C	Hoxd9_MA0913.1	20	0	+	0	0	.
chr16	56102506	56102507	chr16:56102507:C:T	rs77165969	C	T	C	Hoxd9_MA0913.1	26	0	-	0	0	.
chr16	56196783	56196784	chr16:56196784:G:A	rs1210083	G	A	G	Hoxd9_MA0913.1	28	0	+	0	0	.
chr16	56365254	56365255	chr16:56365255:G:T	rs75309038	G	T	G	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr16	56612749	56612750	chr16:56612750:T:C	rs191645374	T	C	T	Hoxd9_MA0913.1	9	1	+	8.079531266869532	7.241304888755173	CCAATAAAAT
chr16	56620491	56620492	chr16:56620492:T:A	rs12923959	T	A	T	Hoxd9_MA0913.1	28	0	-	0	0	.
chr16	56702224	56702225	chr16:56702225:G:C	rs143830065	G	C	G	Hoxd9_MA0913.1	20	0	-	0	0	.
chr16	56841382	56841383	chr16:56841383:G:A	rs77285911	G	A	G	Hoxd9_MA0913.1	1	1	-	8.594690316172638	8.246554688443613	GCCATTAAAT
chr16	56841389	56841390	chr16:56841390:C:A	rs113334990	C	A	C	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr16	56851177	56851178	chr16:56851178:C:T	rs62037026	C	T	C	Hoxd9_MA0913.1	0	1	-	7.75646393805828	6.808730214647819	GCCATTAAAC
chr16	56871337	56871338	chr16:56871338:C:T	rs1123507	C	T	C	Hoxd9_MA0913.1	21	0	-	0	0	.
chr16	56924888	56924889	chr16:56924889:A:C	rs863706	A	C	A	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr16	57010665	57010666	chr16:57010666:C:T	rs1151263	C	T	c	Hoxd9_MA0913.1	19	0	-	0	0	.
chr16	57191294	57191295	chr16:57191295:T:C	rs116106888	T	C	T	Hoxd9_MA0913.1	3	1	-	9.801341972390743	7.973723031895638	GCAATAAAAA
chr16	57289731	57289732	chr16:57289732:G:A	rs11076187	G	A	A	Hoxd9_MA0913.1	1	1	-	8.60979621184233	8.261660584113304	ACAATAAAAT
chr16	57378287	57378288	chr16:57378288:A:G	rs172783	A	G	G	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr16	57391290	57391291	chr16:57391291:A:G	rs72788718	A	G	a	Hoxd9_MA0913.1	13	0	-	0	0	.
chr16	57619677	57619678	chr16:57619678:T:G	rs919764966	T	G	T	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr16	57808278	57808279	chr16:57808279:G:T	rs147541311	G	T	G	Hoxd9_MA0913.1	16	0	+	0	0	.
chr16	57885129	57885130	chr16:57885130:C:T	rs11643127	C	T	T	Hoxd9_MA0913.1	20	0	+	0	0	.
chr16	58023079	58023080	chr16:58023080:A:G	rs16959644	A	G	A	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr16	58081129	58081130	chr16:58081130:A:G	rs7191378	A	G	G	Hoxd9_MA0913.1	28	0	-	0	0	.
chr16	58233961	58233962	chr16:58233962:T:G	rs116768571	T	G	T	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr16	58281726	58281727	chr16:58281727:C:T	rs16960035	C	T	T	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr16	58349331	58349332	chr16:58349332:C:T	rs74401493	C	T	C	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr16	58349372	58349373	chr16:58349373:A:T	rs6499948	A	T	T	Hoxd9_MA0913.1	27	0	+	0	0	.
chr16	58686961	58686962	chr16:58686962:G:T	rs112643426	G	T	g	Hoxd9_MA0913.1	10	0	-	0	0	.
chr16	58687192	58687193	chr16:58687193:A:G	rs9745345	A	G	g	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr16	58884401	58884402	chr16:58884402:G:A	rs1531581	G	A	A	Hoxd9_MA0913.1	24	0	+	0	0	.
chr16	59168530	59168531	chr16:59168531:G:A	rs12444458	G	A	G	Hoxd9_MA0913.1	1	1	-	8.334848631621252	7.986713003892226	GCAATAAAAG
chr16	59176950	59176951	chr16:59176951:C:T	rs12446978	C	T	T	Hoxd9_MA0913.1	1	1	+	7.8800714937946905	7.531935866065666	GCGATAAAAT
chr16	59514949	59514950	chr16:59514950:G:T	rs76419001	G	T	G	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr16	59532241	59532242	chr16:59532242:C:A	rs7203083	C	A	A	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr16	59791837	59791838	chr16:59791838:C:T	rs12447274	C	T	C	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr16	60091503	60091504	chr16:60091504:A:G	rs2582596	A	G	A	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr16	60190668	60190669	chr16:60190669:G:A	rs3848267	G	A	G	Hoxd9_MA0913.1	21	0	+	0	0	.
chr16	61089904	61089905	chr16:61089905:C:G	rs964197	C	G	G	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr16	61617570	61617571	chr16:61617571:C:T	rs4386126	C	T	C	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr16	62184116	62184117	chr16:62184117:A:T	rs12599468	A	T	T	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr16	62226059	62226060	chr16:62226060:C:A	rs58987471	C	A	A	Hoxd9_MA0913.1	16	0	+	0	0	.
chr16	62547415	62547416	chr16:62547416:T:A	rs3011234	T	A	T	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr16	62604863	62604864	chr16:62604864:G:A	rs73556670	G	A	G	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr16	62861860	62861861	chr16:62861861:C:T	rs1124499	C	T	T	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr16	63458616	63458617	chr16:63458617:T:C	rs59380206	T	C	T	Hoxd9_MA0913.1	9	1	+	7.688740572647875	6.850514194533517	GCAGTTAAAT
chr16	63925498	63925499	chr16:63925499:A:G	rs8058874	A	G	A	Hoxd9_MA0913.1	4	1	-	7.986713003892226	4.694578752117247	GTAATAAAAG
chr16	63926752	63926753	chr16:63926753:C:T	rs9926808	C	T	T	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr16	63976809	63976810	chr16:63976810:T:C	rs77636060	T	C	T	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr16	63976814	63976815	chr16:63976815:C:G	rs115060454	C	G	C	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr16	64354523	64354524	chr16:64354524:A:G	rs16967378	A	G	A	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr16	64419713	64419714	chr16:64419714:G:T	rs11647520	G	T	G	Hoxd9_MA0913.1	12	0	+	0	0	.
chr16	64435351	64435352	chr16:64435352:T:C	rs11646771	T	C	T	Hoxd9_MA0913.1	26	0	-	0	0	.
chr16	64435352	64435353	chr16:64435353:C:T	rs11641369	C	T	C	Hoxd9_MA0913.1	25	0	-	0	0	.
chr16	64450263	64450264	chr16:64450264:T:C	rs17561653	T	C	T	Hoxd9_MA0913.1	3	1	-	7.931939052009941	6.104320111514838	ACCATAAAAA
chr16	64450284	64450285	chr16:64450285:T:C	rs11645963	T	C	C	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr16	64724790	64724791	chr16:64724791:C:T	rs231048	C	T	C	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr16	64773551	64773552	chr16:64773552:C:T	rs17487665	C	T	C	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr16	64784925	64784926	chr16:64784926:C:A	rs62039958	C	A	C	Hoxd9_MA0913.1	14	0	+	0	0	.
chr16	64853751	64853752	chr16:64853752:C:A	rs74808662	C	A	C	Hoxd9_MA0913.1	26	0	-	0	0	.
chr16	64984545	64984546	chr16:64984546:G:A	rs35203	G	A	C	Hoxd9_MA0913.1	22	0	+	0	0	.
chr16	65063028	65063029	chr16:65063029:C:T	rs559160183	C	T	c	Hoxd9_MA0913.1	21	0	+	0	0	.
chr16	65063034	65063035	chr16:65063035:T:C	rs566280784	T	C	T	Hoxd9_MA0913.1	27	0	+	0	0	.
chr16	65104686	65104687	chr16:65104687:C:A	rs7203623	C	A	A	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr16	65229704	65229705	chr16:65229705:A:T	rs9673255	A	T	A	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr16	65323830	65323831	chr16:65323831:G:C	rs72778833	G	C	g	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr16	65489695	65489696	chr16:65489696:A:G	rs6499002	A	G	G	Hoxd9_MA0913.1	18	0	+	0	0	.
chr16	65523703	65523704	chr16:65523704:A:G	rs929863	A	G	A	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr16	65667096	65667097	chr16:65667097:G:A	rs55990266	G	A	A	Hoxd9_MA0913.1	24	0	+	0	0	.
chr16	65867765	65867766	chr16:65867766:C:G	rs74023501	C	G	C	Hoxd9_MA0913.1	19	0	+	0	0	.
chr16	65988472	65988473	chr16:65988473:A:G	rs78211799	A	G	A	Hoxd9_MA0913.1	12	0	+	0	0	.
chr16	65988476	65988477	chr16:65988477:A:G	rs75230071	A	G	A	Hoxd9_MA0913.1	16	0	+	0	0	.
chr16	66026096	66026097	chr16:66026097:C:T	rs1862670	C	T	T	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr16	66127444	66127445	chr16:66127445:A:G	rs255207	A	G	G	Hoxd9_MA0913.1	27	0	+	0	0	.
chr16	66275364	66275365	chr16:66275365:A:C	rs57211179	A	C	C	Hoxd9_MA0913.1	9	1	+	8.282172881897674	7.200134466645363	CCAATTAAAA
chr16	66337748	66337749	chr16:66337749:G:A	rs146494819	G	A	G	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr16	66344799	66344800	chr16:66344800:T:C	rs77715854	T	C	T	Hoxd9_MA0913.1	1	1	+	9.412035922551908	9.760171550280933	GTAATTAAAA
chr16	66413760	66413761	chr16:66413761:G:A	rs10852433	G	A	A	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr16	66487971	66487972	chr16:66487972:T:C	rs16956575	T	C	T	Hoxd9_MA0913.1	24	0	+	0	0	.
chr16	66597638	66597639	chr16:66597639:A:G	rs61066285	A	G	G	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr16	66706407	66706408	chr16:66706408:A:G	rs954988746	A	G	A	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr16	66935272	66935273	chr16:66935273:C:G	rs11075646	C	G	C	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr16	67394403	67394404	chr16:67394404:A:G	rs117132786	A	G	A	Hoxd9_MA0913.1	9	1	+	7.265533775852649	5.799040435083157	GCCATTAAGA
chr16	68265852	68265853	chr16:68265853:T:C	rs145343884	T	C	T	Hoxd9_MA0913.1	7	1	-	9.801341972390743	2.9621974950363996	GCAATAAAAA
chr16	68265867	68265868	chr16:68265868:G:A	rs12596500	G	A	G	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr16	68265877	68265878	chr16:68265878:T:C	rs12924125	T	C	T	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr16	68265879	68265880	chr16:68265880:C:T	rs8053109	C	T	C	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr16	68738001	68738002	chr16:68738002:A:C	rs12932357	A	C	C	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr16	68808315	68808316	chr16:68808316:A:G	rs1010572874	A	G	A	Hoxd9_MA0913.1	19	0	+	0	0	.
chr16	68823385	68823386	chr16:68823386:T:C	rs2276330	T	C	T	Hoxd9_MA0913.1	3	1	-	9.801341972390743	7.973723031895638	GCAATAAAAA
chr16	68941137	68941138	chr16:68941138:T:C	rs144688388	T	C	T	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr16	69385179	69385180	chr16:69385180:T:A	rs8061382	T	A	T	Hoxd9_MA0913.1	22	0	+	0	0	.
chr16	69404396	69404397	chr16:69404397:G:A	rs143139790	G	A	G	Hoxd9_MA0913.1	26	0	+	0	0	.
chr16	69448952	69448953	chr16:69448953:T:A	chr16:69448953:T:A	T	A	T	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr16	69547173	69547174	chr16:69547174:G:A	rs8061725	G	A	G	Hoxd9_MA0913.1	28	0	+	0	0	.
chr16	69800923	69800924	chr16:69800924:G:A	rs1008550490	G	A	g	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr16	69843582	69843583	chr16:69843583:G:A	rs116734772	G	A	G	Hoxd9_MA0913.1	20	0	+	0	0	.
chr16	69867202	69867203	chr16:69867203:T:A	rs4985450	T	A	A	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr16	69930470	69930471	chr16:69930471:G:A	rs4985460	G	A	G	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr16	69941727	69941728	chr16:69941728:A:T	rs3192882	A	T	A	Hoxd9_MA0913.1	9	1	+	7.801678332738202	7.557866295600249	GCAATAAACA
chr16	70026535	70026536	chr16:70026536:T:C	rs34729113	T	C	t	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr16	70066866	70066867	chr16:70066867:C:G	rs546308163	C	G	.	Hoxd9_MA0913.1	25	0	-	0	0	.
chr16	70523692	70523693	chr16:70523693:C:T	chr16:70523693:C:T	C	T	C	Hoxd9_MA0913.1	1	1	+	7.146334979680488	6.798199351951464	GCAATAAAGC
chr16	70574871	70574872	chr16:70574872:T:C	rs7192031	T	C	T	Hoxd9_MA0913.1	18	0	-	0	0	.
chr16	70630169	70630170	chr16:70630170:C:G	rs34234103	C	G	C	Hoxd9_MA0913.1	22	0	-	0	0	.
chr16	70649298	70649299	chr16:70649299:C:T	rs7192723	C	T	T	Hoxd9_MA0913.1	9	1	-	8.293678209511443	9.760171550280933	GCAATTAAAG
chr16	71492187	71492188	chr16:71492188:C:T	rs58134724	C	T	C	Hoxd9_MA0913.1	18	0	+	0	0	.
chr16	71683310	71683311	chr16:71683311:A:G	rs17355804	A	G	A	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr16	71918013	71918014	chr16:71918014:G:A	rs79391128	G	A	G	Hoxd9_MA0913.1	24	0	-	0	0	.
chr16	71959738	71959739	chr16:71959739:A:G	rs4788585	A	G	G	Hoxd9_MA0913.1	27	0	+	0	0	.
chr16	72095845	72095846	chr16:72095846:T:C	rs12924413	T	C	C	Hoxd9_MA0913.1	9	1	-	9.801341972390743	8.334848631621252	GCAATAAAAA
chr16	72150059	72150060	chr16:72150060:G:A	rs10852511	G	A	A	Hoxd9_MA0913.1	22	0	+	0	0	.
chr16	72769534	72769535	chr16:72769535:A:C	rs76967471	A	C	C	Hoxd9_MA0913.1	13	0	-	0	0	.
chr16	72878252	72878253	chr16:72878253:C:T	rs75919816	C	T	C	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr16	72933716	72933717	chr16:72933717:T:C	rs79425166	T	C	T	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr16	73322337	73322338	chr16:73322338:G:A	rs4888572	G	A	G	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr16	73341770	73341771	chr16:73341771:G:A	rs4447458	G	A	G	Hoxd9_MA0913.1	18	0	+	0	0	.
chr16	73405743	73405744	chr16:73405744:G:T	rs66480043	G	T	T	Hoxd9_MA0913.1	29	0	+	0	0	.
chr16	74128762	74128763	chr16:74128763:G:C	rs75723453	G	C	G	Hoxd9_MA0913.1	22	0	+	0	0	.
chr16	74165687	74165688	chr16:74165688:A:G	rs9938838	A	G	A	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr16	74165713	74165714	chr16:74165714:A:C	rs117905454	A	C	A	Hoxd9_MA0913.1	6	1	+	8.635860738282448	4.1612838756142425	GCCATAAAAT
chr16	74268584	74268585	chr16:74268585:T:C	rs534962130	T	C	T	Hoxd9_MA0913.1	5	1	-	8.2283733949328	2.006710242036932	GCAATAAAGA
chr16	74370913	74370914	chr16:74370914:C:T	rs11865100	C	T	.	Hoxd9_MA0913.1	0	1	-	9.412035922551908	8.464302199141448	GTAATTAAAA
chr16	74425907	74425908	chr16:74425908:C:A	rs11639801	C	A	.	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr16	74438647	74438648	chr16:74438648:G:T	rs11149710	G	T	.	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr16	74438685	74438686	chr16:74438686:C:T	rs12444150	C	T	.	Hoxd9_MA0913.1	20	0	+	0	0	.
chr16	74533489	74533490	chr16:74533490:C:T	rs1971071	C	T	C	Hoxd9_MA0913.1	26	0	+	0	0	.
chr16	74702772	74702773	chr16:74702773:T:C	rs2158456	T	C	C	Hoxd9_MA0913.1	29	0	-	0	0	.
chr16	74709718	74709719	chr16:74709719:T:A	rs574404762	T	A	T	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr16	74801315	74801316	chr16:74801316:T:C	rs2113274	T	C	T	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr16	74867929	74867930	chr16:74867930:A:C	rs8045860	A	C	A	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr16	74869902	74869903	chr16:74869903:A:G	rs74026604	A	G	A	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr16	75075684	75075685	chr16:75075685:T:G	rs72800362	T	G	T	Hoxd9_MA0913.1	18	0	+	0	0	.
chr16	75090879	75090880	chr16:75090880:G:A	rs147882572	G	A	G	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr16	75093112	75093113	chr16:75093113:G:A	rs58355832	G	A	G	Hoxd9_MA0913.1	28	0	+	0	0	.
chr16	75211104	75211105	chr16:75211105:G:T	rs9921586	G	T	g	Hoxd9_MA0913.1	26	0	-	0	0	.
chr16	75288587	75288588	chr16:75288588:C:G	rs8055098	C	G	C	Hoxd9_MA0913.1	26	0	+	0	0	.
chr16	75376899	75376900	chr16:75376900:C:A	rs8056080	C	A	C	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr16	75377826	75377827	chr16:75377827:T:C	rs8046184	T	C	C	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr16	75538024	75538025	chr16:75538025:T:C	rs2550886	T	C	C	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr16	75589094	75589095	chr16:75589095:A:C	rs8051241	A	C	C	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr16	75801546	75801547	chr16:75801547:G:A	rs74024829	G	A	A	Hoxd9_MA0913.1	0	1	+	9.209394307523764	8.261660584113304	GTAATAAAAT
chr16	76195655	76195656	chr16:76195656:G:A	rs8047283	G	A	G	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr16	76531629	76531630	chr16:76531630:C:T	rs116575143	C	T	C	Hoxd9_MA0913.1	16	0	-	0	0	.
chr16	76598620	76598621	chr16:76598621:G:A	rs12930547	G	A	A	Hoxd9_MA0913.1	14	0	+	0	0	.
chr16	76900638	76900639	chr16:76900639:C:T	rs4887886	C	T	T	Hoxd9_MA0913.1	15	0	+	0	0	.
chr16	76988884	76988885	chr16:76988885:C:A	rs4888585	C	A	C	Hoxd9_MA0913.1	17	0	+	0	0	.
chr16	77048635	77048636	chr16:77048636:A:C	rs4888590	A	C	A	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr16	77063210	77063211	chr16:77063211:T:C	rs28528265	T	C	T	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr16	77063230	77063231	chr16:77063231:A:C	rs17701089	A	C	A	Hoxd9_MA0913.1	6	1	+	7.931939052009941	3.4573621893417363	ACCATAAAAA
chr16	77171720	77171721	chr16:77171721:G:A	rs6564398	G	A	A	Hoxd9_MA0913.1	23	0	-	0	0	.
chr16	77171742	77171743	chr16:77171743:A:G	rs74497356	A	G	A	Hoxd9_MA0913.1	1	1	-	8.490366725581566	8.838502353310592	GTCATTAAAA
chr16	77423168	77423169	chr16:77423169:A:G	rs17621255	A	G	A	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr16	77427314	77427315	chr16:77427315:A:G	rs62043624	A	G	A	Hoxd9_MA0913.1	28	0	+	0	0	.
chr16	77442211	77442212	chr16:77442212:T:C	rs1038951	T	C	T	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr16	77510507	77510508	chr16:77510508:G:A	rs16945803	G	A	A	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr16	77556558	77556559	chr16:77556559:C:G	rs62043937	C	G	C	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr16	77556588	77556589	chr16:77556589:C:A	rs282990	C	A	A	Hoxd9_MA0913.1	26	0	+	0	0	.
chr16	77610409	77610410	chr16:77610410:T:C	rs77761059	T	C	T	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr16	77720731	77720732	chr16:77720732:C:A	rs1202522017	C	A	C	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr16	77966567	77966568	chr16:77966568:C:T	rs4144524	C	T	C	Hoxd9_MA0913.1	29	0	+	0	0	.
chr16	78002189	78002190	chr16:78002190:A:G	rs4243142	A	G	A	Hoxd9_MA0913.1	15	0	+	0	0	.
chr16	78071468	78071469	chr16:78071469:T:C	rs12925573	T	C	T	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr16	78164294	78164295	chr16:78164295:T:C	rs2303191	T	C	C	Hoxd9_MA0913.1	29	0	-	0	0	.
chr16	78164338	78164339	chr16:78164339:G:A	rs2303190	G	A	G	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr16	78236180	78236181	chr16:78236181:C:T	rs16947307	C	T	c	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr16	78257603	78257604	chr16:78257604:G:A	rs78612110	G	A	G	Hoxd9_MA0913.1	0	1	+	9.760171550280933	8.812437826870472	GCAATTAAAA
chr16	78285903	78285904	chr16:78285904:C:G	rs72790071	C	G	C	Hoxd9_MA0913.1	8	1	-	7.880237767203775	7.453542705009177	GTAATAAAGA
chr16	78290017	78290018	chr16:78290018:A:G	rs9932306	A	G	G	Hoxd9_MA0913.1	4	1	-	7.986713003892226	4.694578752117247	GTAATAAAAG
chr16	78292456	78292457	chr16:78292457:C:G	rs11150054	C	G	C	Hoxd9_MA0913.1	16	0	+	0	0	.
chr16	78381241	78381242	chr16:78381242:C:T	rs11150071	C	T	C	Hoxd9_MA0913.1	14	0	+	0	0	.
chr16	78492412	78492413	chr16:78492413:G:C	rs73578907	G	C	G	Hoxd9_MA0913.1	26	0	+	0	0	.
chr16	78624684	78624685	chr16:78624685:T:G	rs72805028	T	G	T	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr16	78685179	78685180	chr16:78685180:G:C	rs2738630	G	C	G	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr16	78708841	78708842	chr16:78708842:C:T	rs7206203	C	T	C	Hoxd9_MA0913.1	28	0	+	0	0	.
chr16	78718167	78718168	chr16:78718168:C:G	rs72799088	C	G	A	Hoxd9_MA0913.1	0	1	-	8.879672775420401	7.4016741070371435	GCCATAAAAA
chr16	78720499	78720500	chr16:78720500:T:C	rs11645548	T	C	T	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr16	78823063	78823064	chr16:78823064:T:A	rs7197765	T	A	A	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr16	78844675	78844676	chr16:78844676:C:G	rs6564608	C	G	G	Hoxd9_MA0913.1	29	0	+	0	0	.
chr16	79018556	79018557	chr16:79018557:C:G	rs9932373	C	G	C	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr16	79023246	79023247	chr16:79023247:A:C	rs2550710	A	C	C	Hoxd9_MA0913.1	6	1	+	7.986713003892226	3.512136141224021	GTAATAAAAG
chr16	79122019	79122020	chr16:79122020:C:T	rs9940536	C	T	T	Hoxd9_MA0913.1	23	0	+	0	0	.
chr16	79129979	79129980	chr16:79129980:A:C	rs11648193	A	C	A	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr16	79149009	79149010	chr16:79149010:A:G	rs12050933	A	G	A	Hoxd9_MA0913.1	26	0	-	0	0	.
chr16	79155555	79155556	chr16:79155556:C:G	rs11859414	C	G	G	Hoxd9_MA0913.1	27	0	+	0	0	.
chr16	79201645	79201646	chr16:79201646:G:A	rs183125210	G	A	G	Hoxd9_MA0913.1	19	0	+	0	0	.
chr16	79250438	79250439	chr16:79250439:T:G	rs16950049	T	G	T	Hoxd9_MA0913.1	15	0	-	0	0	.
chr16	79282814	79282815	chr16:79282815:A:G	rs10514450	A	G	A	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr16	79287569	79287570	chr16:79287570:C:T	rs73571317	C	T	C	Hoxd9_MA0913.1	22	0	+	0	0	.
chr16	79381605	79381606	chr16:79381606:C:T	rs11859844	C	T	C	Hoxd9_MA0913.1	18	0	-	0	0	.
chr16	79668743	79668744	chr16:79668744:G:A	rs4888043	G	A	G	Hoxd9_MA0913.1	10	0	+	0	0	.
chr16	79672823	79672824	chr16:79672824:C:G	rs114503656	C	G	C	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr16	79672853	79672854	chr16:79672854:T:C	rs1424231	T	C	T	Hoxd9_MA0913.1	27	0	+	0	0	.
chr16	79721334	79721335	chr16:79721335:T:C	rs374545300	T	C	T	Hoxd9_MA0913.1	11	0	-	0	0	.
chr16	79752106	79752107	chr16:79752107:A:G	rs7189057	A	G	A	Hoxd9_MA0913.1	15	0	-	0	0	.
chr16	79985770	79985771	chr16:79985771:T:A	rs190361668	T	A	T	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr16	80091840	80091841	chr16:80091841:T:C	rs149326099	T	C	T	Hoxd9_MA0913.1	1	1	+	9.209394307523764	9.55752993525279	GTAATAAAAT
chr16	80104116	80104117	chr16:80104117:C:G	rs6564732	C	G	C	Hoxd9_MA0913.1	18	0	-	0	0	.
chr16	80147518	80147519	chr16:80147519:C:T	rs80338555	C	T	C	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr16	80151956	80151957	chr16:80151957:A:C	rs201668922	A	C	A	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr16	80258455	80258456	chr16:80258456:A:G	rs7200683	A	G	G	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr16	80285315	80285316	chr16:80285316:T:C	rs2348640	T	C	T	Hoxd9_MA0913.1	8	1	-	7.7976343601680895	6.224665782710147	GCCATAAAAC
chr16	80305406	80305407	chr16:80305407:C:T	rs2139105	C	T	T	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr16	80463703	80463704	chr16:80463704:C:A	rs4581712	C	A	A	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr16	80498740	80498741	chr16:80498741:A:C	rs55863307	A	C	A	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr16	80650268	80650269	chr16:80650269:T:C	rs10871391	T	C	T	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr16	80708459	80708460	chr16:80708460:G:A	rs899955320	G	A	G	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr16	80712267	80712268	chr16:80712268:T:C	rs62051679	T	C	T	Hoxd9_MA0913.1	17	0	+	0	0	.
chr16	80818117	80818118	chr16:80818118:T:C	rs76444333	T	C	T	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr16	80821742	80821743	chr16:80821743:T:C	rs2580317	T	C	C	Hoxd9_MA0913.1	8	1	+	8.32301137036169	7.801678332738202	GCAATAAATA
chr16	80879868	80879869	chr16:80879869:G:C	rs73587561	G	C	G	Hoxd9_MA0913.1	24	0	+	0	0	.
chr16	80971835	80971836	chr16:80971836:T:A	rs13332890	T	A	T	Hoxd9_MA0913.1	1	1	+	8.531537147691377	6.459854399395143	GTCATAAAAA
chr16	81108651	81108652	chr16:81108652:T:C	rs1869348	T	C	C	Hoxd9_MA0913.1	20	0	+	0	0	.
chr16	81275013	81275014	chr16:81275014:T:C	rs35552299	T	C	T	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr16	81287917	81287918	chr16:81287918:T:G	rs72833344	T	G	T	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr16	81311340	81311341	chr16:81311341:T:C	rs12924233	T	C	C	Hoxd9_MA0913.1	28	0	-	0	0	.
chr16	81366412	81366413	chr16:81366413:C:T	rs2113308	C	T	C	Hoxd9_MA0913.1	10	0	-	0	0	.
chr16	81400598	81400599	chr16:81400599:G:C	rs3852704	G	C	G	Hoxd9_MA0913.1	9	1	-	7.146334979680488	6.761880054163308	GCAATAAAGC
chr16	81496992	81496993	chr16:81496993:A:G	rs7192108	A	G	A	Hoxd9_MA0913.1	13	0	+	0	0	.
chr16	81635103	81635104	chr16:81635104:T:A	rs150376143	T	A	T	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr16	81698597	81698598	chr16:81698598:T:C	rs58862198	T	C	T	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr16	81871803	81871804	chr16:81871804:T:C	rs4997771	T	C	T	Hoxd9_MA0913.1	7	1	-	7.801678332738202	0.9625338553838594	GCAATAAACA
chr16	81874125	81874126	chr16:81874126:T:C	rs7189106	T	C	T	Hoxd9_MA0913.1	16	0	-	0	0	.
chr16	81874146	81874147	chr16:81874147:A:G	rs7184247	A	G	A	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr16	81926891	81926892	chr16:81926892:A:C	rs6564938	A	C	A	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr16	81992229	81992230	chr16:81992230:C:G	rs16956130	C	G	G	Hoxd9_MA0913.1	15	0	+	0	0	.
chr16	82005088	82005089	chr16:82005089:A:G	rs187869070	A	G	A	Hoxd9_MA0913.1	3	1	+	8.282172881897674	6.454553941402571	CCAATTAAAA
chr16	82039138	82039139	chr16:82039139:C:G	rs8059915	C	G	G	Hoxd9_MA0913.1	25	0	-	0	0	.
chr16	82091393	82091394	chr16:82091394:T:C	rs8191225	T	C	T	Hoxd9_MA0913.1	22	0	+	0	0	.
chr16	82452526	82452527	chr16:82452527:A:G	rs8055970	A	G	G	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr16	82497385	82497386	chr16:82497386:G:A	rs58085665	G	A	A	Hoxd9_MA0913.1	0	1	+	9.209394307523764	8.261660584113304	GTAATAAAAT
chr16	82545791	82545792	chr16:82545792:A:T	rs34632482	A	T	T	Hoxd9_MA0913.1	5	1	+	8.079531266869532	8.03836084475972	CCAATAAAAT
chr16	82603722	82603723	chr16:82603723:C:A	rs3865182	C	A	C	Hoxd9_MA0913.1	22	0	-	0	0	.
chr16	82622029	82622030	chr16:82622030:G:A	chr16:82622030:G:A	G	A	G	Hoxd9_MA0913.1	11	0	-	0	0	.
chr16	82622054	82622055	chr16:82622055:A:T	rs16957875	A	T	A	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr16	82654462	82654463	chr16:82654463:T:G	rs150085830	T	G	T	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr16	82700758	82700759	chr16:82700759:T:C	rs9788842	T	C	T	Hoxd9_MA0913.1	27	0	-	0	0	.
chr16	82701787	82701788	chr16:82701788:G:A	rs757381757	G	A	A	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr16	82748321	82748322	chr16:82748322:A:T	rs77137800	A	T	A	Hoxd9_MA0913.1	11	0	+	0	0	.
chr16	82748323	82748324	chr16:82748324:T:C	rs17183414	T	C	T	Hoxd9_MA0913.1	13	0	+	0	0	.
chr16	82750226	82750227	chr16:82750227:G:C	rs79909563	G	C	G	Hoxd9_MA0913.1	21	0	-	0	0	.
chr16	82793321	82793322	chr16:82793322:A:C	rs4783275	A	C	T	Hoxd9_MA0913.1	20	0	+	0	0	.
chr16	82845738	82845739	chr16:82845739:A:T	rs4782734	A	T	T	Hoxd9_MA0913.1	28	0	-	0	0	.
chr16	82858052	82858053	chr16:82858053:A:G	rs17740866	A	G	A	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr16	83071129	83071130	chr16:83071130:A:G	rs73598103	A	G	A	Hoxd9_MA0913.1	4	1	-	9.51635951314298	6.224225261367999	GCAATTAAAT
chr16	83076510	83076511	chr16:83076511:G:A	rs4783321	G	A	A	Hoxd9_MA0913.1	1	1	-	8.60979621184233	8.261660584113304	ACAATAAAAT
chr16	83137665	83137666	chr16:83137666:C:T	rs145775009	C	T	C	Hoxd9_MA0913.1	15	0	+	0	0	.
chr16	83157476	83157477	chr16:83157477:C:A	rs7194491	C	A	A	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr16	83202800	83202801	chr16:83202801:T:C	rs9928871	T	C	T	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr16	83267515	83267516	chr16:83267516:G:C	rs78341439	G	C	G	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr16	83420245	83420246	chr16:83420246:A:G	rs10514573	A	G	A	Hoxd9_MA0913.1	10	0	+	0	0	.
chr16	83507240	83507241	chr16:83507241:T:C	rs7189644	T	C	C	Hoxd9_MA0913.1	9	1	-	9.453206344661718	7.986713003892226	GTAATAAAAA
chr16	83644324	83644325	chr16:83644325:G:A	rs66480519	G	A	G	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr16	83645217	83645218	chr16:83645218:A:G	rs8061113	A	G	A	Hoxd9_MA0913.1	6	1	+	8.879672775420401	2.064252107641061	GCCATAAAAA
chr16	83689905	83689906	chr16:83689906:C:T	rs12600325	C	T	C	Hoxd9_MA0913.1	21	0	+	0	0	.
chr16	83706030	83706031	chr16:83706031:C:G	rs7200109	C	G	C	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr16	83727347	83727348	chr16:83727348:C:A	rs7199442	C	A	A	Hoxd9_MA0913.1	23	0	-	0	0	.
chr16	83733723	83733724	chr16:83733724:T:C	rs402010	T	C	C	Hoxd9_MA0913.1	27	0	+	0	0	.
chr16	83786293	83786294	chr16:83786294:T:C	rs692612	T	C	T	Hoxd9_MA0913.1	23	0	-	0	0	.
chr16	83832847	83832848	chr16:83832848:T:C	rs116907211	T	C	T	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr16	84086209	84086210	chr16:84086210:G:C	rs7200337	G	C	G	Hoxd9_MA0913.1	11	0	+	0	0	.
chr16	84261226	84261227	chr16:84261227:C:G	rs117811752	C	G	C	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr16	84483253	84483254	chr16:84483254:C:T	rs149963715	C	T	C	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr16	84489424	84489425	chr16:84489425:G:T	rs1864266	G	T	T	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr16	84500168	84500169	chr16:84500169:G:A	rs34101172	G	A	G	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr16	84508873	84508874	chr16:84508874:G:T	rs9937245	G	T	G	Hoxd9_MA0913.1	16	0	+	0	0	.
chr16	84569431	84569432	chr16:84569432:G:A	rs62050685	G	A	G	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr16	84569437	84569438	chr16:84569438:C:T	rs2099132	C	T	C	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr16	84569476	84569477	chr16:84569477:G:A	rs11640701	G	A	G	Hoxd9_MA0913.1	25	0	+	0	0	.
chr16	84592197	84592198	chr16:84592198:T:C	rs17826353	T	C	T	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr16	84592281	84592282	chr16:84592282:A:G	rs4783027	A	G	A	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr16	84608976	84608977	chr16:84608977:A:G	rs2925050	A	G	A	Hoxd9_MA0913.1	19	0	+	0	0	.
chr16	84664189	84664190	chr16:84664190:C:T	rs3803624	C	T	C	Hoxd9_MA0913.1	17	0	-	0	0	.
chr16	84689285	84689286	chr16:84689286:A:G	rs551175835	A	G	A	Hoxd9_MA0913.1	29	0	-	0	0	.
chr16	84689315	84689316	chr16:84689316:G:A	rs114366208	G	A	A	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr16	84724719	84724720	chr16:84724720:C:G	rs779261997	C	G	C	Hoxd9_MA0913.1	28	0	+	0	0	.
chr16	84979907	84979908	chr16:84979908:C:T	rs12447590	C	T	C	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr16	85086370	85086371	chr16:85086371:T:C	rs3942895	T	C	C	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr16	85222628	85222629	chr16:85222629:G:A	rs974524555	G	A	G	Hoxd9_MA0913.1	16	0	-	0	0	.
chr16	85295400	85295401	chr16:85295401:G:A	rs34413765	G	A	G	Hoxd9_MA0913.1	12	0	-	0	0	.
chr16	85335091	85335092	chr16:85335092:C:T	rs74405358	C	T	C	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr16	85390949	85390950	chr16:85390950:G:A	rs66907603	G	A	G	Hoxd9_MA0913.1	28	0	-	0	0	.
chr16	85470811	85470812	chr16:85470812:G:A	rs77645084	G	A	G	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr16	85578253	85578254	chr16:85578254:A:G	rs12103157	A	G	A	Hoxd9_MA0913.1	4	1	-	7.7976343601680895	4.50550010839311	GCCATAAAAC
chr16	85578254	85578255	chr16:85578255:T:G	rs75179080	T	G	T	Hoxd9_MA0913.1	3	1	-	7.7976343601680895	3.3314036897680337	GCCATAAAAC
chr16	85917314	85917315	chr16:85917315:A:G	rs4843860	A	G	G	Hoxd9_MA0913.1	2	1	+	9.760171550280933	8.082713108822833	GCAATTAAAA
chr16	85930956	85930957	chr16:85930957:T:C	rs366078	T	C	T	Hoxd9_MA0913.1	29	0	-	0	0	.
chr16	86000199	86000200	chr16:86000200:T:C	rs74032552	T	C	T	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr16	86000203	86000204	chr16:86000204:A:G	rs7196849	A	G	A	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr16	86027651	86027652	chr16:86027652:C:T	rs114239137	C	T	C	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr16	86072646	86072647	chr16:86072647:T:C	rs74034215	T	C	T	Hoxd9_MA0913.1	13	0	-	0	0	.
chr16	86072678	86072679	chr16:86072679:G:A	rs74034216	G	A	G	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr16	86084011	86084012	chr16:86084012:G:A	rs11639728	G	A	G	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr16	86121322	86121323	chr16:86121323:T:C	rs16944689	T	C	T	Hoxd9_MA0913.1	14	0	+	0	0	.
chr16	86205837	86205838	chr16:86205838:G:A	rs12920713	G	A	G	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr16	86261643	86261644	chr16:86261644:T:A	rs11117468	T	A	T	Hoxd9_MA0913.1	2	1	-	9.51635951314298	3.066015481292197	GCAATTAAAT
chr16	86363470	86363471	chr16:86363471:G:T	rs183279638	G	T	G	Hoxd9_MA0913.1	29	0	+	0	0	.
chr16	86369947	86369948	chr16:86369948:T:A	rs1552655	T	A	T	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr16	86383639	86383640	chr16:86383640:A:G	rs58863524	A	G	A	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr16	86383655	86383656	chr16:86383656:A:G	rs1728387	A	G	A	Hoxd9_MA0913.1	3	1	+	8.03836084475972	6.2107419042646175	CCAATTAAAT
chr16	86396333	86396334	chr16:86396334:G:C	rs12448971	G	C	G	Hoxd9_MA0913.1	19	0	-	0	0	.
chr16	86455262	86455263	chr16:86455263:C:T	rs9930938	C	T	C	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr16	86458011	86458012	chr16:86458012:A:G	rs7184351	A	G	G	Hoxd9_MA0913.1	4	1	-	7.688740572647875	4.396606320872896	GCAGTTAAAT
chr16	86458018	86458019	chr16:86458019:C:G	rs78778378	C	G	C	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr16	86522302	86522303	chr16:86522303:C:G	rs114854068	C	G	G	Hoxd9_MA0913.1	1	1	+	8.812437826870472	5.719872814585759	ACAATTAAAA
chr16	86619659	86619660	chr16:86619660:T:C	rs9924801	T	C	T	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr16	86757886	86757887	chr16:86757887:A:G	rs299953	A	G	G	Hoxd9_MA0913.1	0	1	+	7.890768629900132	8.838502353310592	ACCATTAAAA
chr16	86789429	86789430	chr16:86789430:A:G	rs535598437	A	G	A	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr16	86883564	86883565	chr16:86883565:C:G	rs4843191	C	G	G	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr16	86897088	86897089	chr16:86897089:T:C	rs4072137	T	C	C	Hoxd9_MA0913.1	25	0	-	0	0	.
chr16	86925269	86925270	chr16:86925270:C:T	rs6539984	C	T	T	Hoxd9_MA0913.1	1	1	+	7.4131794346509094	7.065043806921886	GCCATAAAAG
chr16	86975174	86975175	chr16:86975175:C:T	rs4843203	C	T	C	Hoxd9_MA0913.1	22	0	+	0	0	.
chr16	87020830	87020831	chr16:87020831:C:A	rs17290774	C	A	C	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr16	87035855	87035856	chr16:87035856:T:C	rs3893739	T	C	T	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr16	87067845	87067846	chr16:87067846:T:A	rs17770146	T	A	T	Hoxd9_MA0913.1	19	0	-	0	0	.
chr16	87201041	87201042	chr16:87201042:T:G	rs72802122	T	G	G	Hoxd9_MA0913.1	28	0	-	0	0	.
chr16	87238062	87238063	chr16:87238063:C:T	rs13336278	C	T	T	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr16	87301425	87301426	chr16:87301426:A:G	rs12934444	A	G	G	Hoxd9_MA0913.1	11	0	+	0	0	.
chr16	87396632	87396633	chr16:87396633:C:T	rs7204722	C	T	T	Hoxd9_MA0913.1	28	0	-	0	0	.
chr16	87457911	87457912	chr16:87457912:G:A	rs766742152	G	A	G	Hoxd9_MA0913.1	12	0	+	0	0	.
chr16	87723677	87723678	chr16:87723678:G:A	chr16:87723678:G:A	G	A	G	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr16	87723677	87723678	chr16:87723678:G:C	rs4843682	G	C	G	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr16	87765125	87765126	chr16:87765126:G:C	rs4843266	G	C	C	Hoxd9_MA0913.1	12	0	+	0	0	.
chr16	87863529	87863530	chr16:87863530:T:C	rs144117488	T	C	T	Hoxd9_MA0913.1	25	0	+	0	0	.
chr16	87952704	87952705	chr16:87952705:C:T	rs182965422	C	T	c	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr16	87967401	87967402	chr16:87967402:T:C	rs12599962	T	C	t	Hoxd9_MA0913.1	25	0	-	0	0	.
chr16	88662104	88662105	chr16:88662105:A:G	rs12933657	A	G	A	Hoxd9_MA0913.1	9	1	-	8.635860738282448	7.7976343601680895	GCCATAAAAT
chr16	88760929	88760930	chr16:88760930:G:A	rs112028717	G	A	G	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr16	88783345	88783346	chr16:88783346:G:A	rs76327864	G	A	G	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr16	89014509	89014510	chr16:89014510:G:T	rs13336078	G	T	G	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr16	89121893	89121894	chr16:89121894:T:C	rs35118496	T	C	C	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr16	89459778	89459779	chr16:89459779:A:C	rs72803374	A	C	A	Hoxd9_MA0913.1	5	1	+	8.853608248980283	5.418806477610913	ACAATAAAAA
chr16	89557684	89557685	chr16:89557685:C:T	rs8059296	C	T	C	Hoxd9_MA0913.1	29	0	-	0	0	.
chr16	89557729	89557730	chr16:89557730:G:T	chr16:89557730:G:T	G	T	G	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr17	222369	222370	chr17:222370:G:A	rs35292180	G	A	G	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr17	241620	241621	chr17:241621:A:G	rs147085763	A	G	A	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr17	501296	501297	chr17:501297:C:T	rs4968166	C	T	t	Hoxd9_MA0913.1	1	1	+	8.60979621184233	8.261660584113304	ACAATAAAAT
chr17	551264	551265	chr17:551265:A:G	rs72808269	A	G	A	Hoxd9_MA0913.1	2	1	+	9.412035922551908	7.73457748109381	GTAATTAAAA
chr17	859414	859415	chr17:859415:T:C	rs140264887	T	C	T	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr17	911079	911080	chr17:911080:T:C	rs7209796	T	C	T	Hoxd9_MA0913.1	19	0	-	0	0	.
chr17	927868	927869	chr17:927869:C:T	rs11247565	C	T	C	Hoxd9_MA0913.1	0	1	-	7.945542581782417	6.997808858371956	GTAATTAAAG
chr17	927879	927880	chr17:927880:C:A	rs114698016	C	A	C	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr17	1056980	1056981	chr17:1056981:C:G	rs2304959	C	G	C	Hoxd9_MA0913.1	28	0	-	0	0	.
chr17	1199302	1199303	chr17:1199303:C:G	rs12948303	C	G	C	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr17	1307315	1307316	chr17:1307316:C:T	rs9909338	C	T	C	Hoxd9_MA0913.1	25	0	+	0	0	.
chr17	1390859	1390860	chr17:1390860:G:C	rs16945795	G	C	G	Hoxd9_MA0913.1	13	0	+	0	0	.
chr17	1684190	1684191	chr17:1684191:A:G	chr17:1684191:A:G	A	G	A	Hoxd9_MA0913.1	10	0	-	0	0	.
chr17	1684202	1684203	chr17:1684203:G:C	rs373443806	G	C	G	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr17	1796787	1796788	chr17:1796788:T:C	rs5005394	T	C	C	Hoxd9_MA0913.1	10	0	-	0	0	.
chr17	1824381	1824382	chr17:1824382:C:T	rs719912	C	T	T	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr17	1889528	1889529	chr17:1889529:C:T	rs11078705	C	T	c	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr17	1904410	1904411	chr17:1904411:A:G	rs7208736	A	G	a	Hoxd9_MA0913.1	15	0	+	0	0	.
chr17	2069111	2069112	chr17:2069112:A:G	rs57548838	A	G	A	Hoxd9_MA0913.1	5	1	+	9.801341972390743	3.5796788194948737	GCAATAAAAA
chr17	2101614	2101615	chr17:2101615:G:A	rs16951902	G	A	G	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr17	2121305	2121306	chr17:2121306:A:G	rs2760738	A	G	A	Hoxd9_MA0913.1	2	1	+	9.801341972390743	8.123883530932645	GCAATAAAAA
chr17	2158039	2158040	chr17:2158040:G:C	rs7208638	G	C	G	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr17	2167763	2167764	chr17:2167764:C:T	rs9894613	C	T	T	Hoxd9_MA0913.1	1	1	+	7.146334979680488	6.798199351951464	GCAATAAAGC
chr17	2199142	2199143	chr17:2199143:C:T	rs16952009	C	T	C	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr17	2199158	2199159	chr17:2199159:G:C	rs9908888	G	C	G	Hoxd9_MA0913.1	13	0	+	0	0	.
chr17	2368729	2368730	chr17:2368730:T:C	rs7210932	T	C	T	Hoxd9_MA0913.1	7	1	-	7.801678332738202	0.9625338553838594	GCAATAAACA
chr17	2416013	2416014	chr17:2416014:A:G	rs76220209	A	G	A	Hoxd9_MA0913.1	28	0	+	0	0	.
chr17	2775637	2775638	chr17:2775638:C:T	rs9894753	C	T	T	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr17	2878215	2878216	chr17:2878216:A:G	rs9915468	A	G	G	Hoxd9_MA0913.1	24	0	-	0	0	.
chr17	2946425	2946426	chr17:2946426:A:G	rs12150217	A	G	A	Hoxd9_MA0913.1	4	1	-	9.412035922551908	6.119901670776928	GTAATTAAAA
chr17	3051022	3051023	chr17:3051023:C:T	rs11078436	C	T	C	Hoxd9_MA0913.1	12	0	+	0	0	.
chr17	3260675	3260676	chr17:3260676:T:A	rs2469797	T	A	.	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr17	3480278	3480279	chr17:3480279:C:T	rs11656291	C	T	C	Hoxd9_MA0913.1	18	0	+	0	0	.
chr17	3492831	3492832	chr17:3492832:G:A	rs2035938	G	A	G	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr17	3911736	3911737	chr17:3911737:T:C	rs11078474	T	C	T	Hoxd9_MA0913.1	17	0	-	0	0	.
chr17	3989896	3989897	chr17:3989897:T:C	rs9902370	T	C	T	Hoxd9_MA0913.1	13	0	-	0	0	.
chr17	4075613	4075614	chr17:4075614:C:T	rs1829166	C	T	c	Hoxd9_MA0913.1	27	0	-	0	0	.
chr17	4196223	4196224	chr17:4196224:G:A	rs4790592	G	A	A	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr17	4204549	4204550	chr17:4204550:T:C	rs79961001	T	C	T	Hoxd9_MA0913.1	26	0	+	0	0	.
chr17	4252833	4252834	chr17:4252834:T:A	rs8074058	T	A	T	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr17	4252864	4252865	chr17:4252865:G:A	rs8068429	G	A	G	Hoxd9_MA0913.1	14	0	+	0	0	.
chr17	4295354	4295355	chr17:4295355:A:G	rs4508454	A	G	A	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr17	4382133	4382134	chr17:4382134:A:G	rs9891529	A	G	A	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr17	4412179	4412180	chr17:4412180:G:C	rs540299434	G	C	g	Hoxd9_MA0913.1	29	0	+	0	0	.
chr17	4508209	4508210	chr17:4508210:A:T	rs4790637	A	T	A	Hoxd9_MA0913.1	4	1	-	7.265533775852649	4.578282351666493	GCCATTAAGA
chr17	4521669	4521670	chr17:4521670:G:A	rs9916478	G	A	A	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr17	4562457	4562458	chr17:4562458:T:C	rs71368505	T	C	T	Hoxd9_MA0913.1	13	0	-	0	0	.
chr17	4660555	4660556	chr17:4660556:A:C	rs181586478	A	C	A	Hoxd9_MA0913.1	11	0	+	0	0	.
chr17	4678524	4678525	chr17:4678525:G:A	rs11869912	G	A	G	Hoxd9_MA0913.1	0	1	+	7.146334979680488	6.198601256270028	GCAATAAAGC
chr17	4678548	4678549	chr17:4678549:C:T	rs6502807	C	T	C	Hoxd9_MA0913.1	24	0	+	0	0	.
chr17	4749046	4749047	chr17:4749047:G:A	rs9907946	G	A	a	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr17	4791889	4791890	chr17:4791890:G:A	rs58778188	G	A	G	Hoxd9_MA0913.1	28	0	-	0	0	.
chr17	4967992	4967993	chr17:4967993:T:C	rs117836374	T	C	T	Hoxd9_MA0913.1	25	0	-	0	0	.
chr17	5233123	5233124	chr17:5233124:T:C	chr17:5233124:T:C	T	C	T	Hoxd9_MA0913.1	14	0	+	0	0	.
chr17	5326159	5326160	chr17:5326160:C:T	rs56960906	C	T	C	Hoxd9_MA0913.1	12	0	+	0	0	.
chr17	5399894	5399895	chr17:5399895:G:A	rs60116755	G	A	G	Hoxd9_MA0913.1	10	0	+	0	0	.
chr17	5460302	5460303	chr17:5460303:T:C	rs9912028	T	C	t	Hoxd9_MA0913.1	29	0	-	0	0	.
chr17	5460331	5460332	chr17:5460332:C:T	rs11868567	C	T	C	Hoxd9_MA0913.1	0	1	-	7.265533775852649	6.317800052442189	GCCATTAAGA
chr17	5608865	5608866	chr17:5608866:A:G	rs62075374	A	G	A	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr17	5666957	5666958	chr17:5666958:T:G	rs67110178	T	G	G	Hoxd9_MA0913.1	26	0	-	0	0	.
chr17	5855261	5855262	chr17:5855262:A:G	rs888324	A	G	G	Hoxd9_MA0913.1	17	0	-	0	0	.
chr17	5931473	5931474	chr17:5931474:A:C	rs58382974	A	C	A	Hoxd9_MA0913.1	15	0	+	0	0	.
chr17	6147168	6147169	chr17:6147169:A:G	rs7405550	A	G	G	Hoxd9_MA0913.1	28	0	+	0	0	.
chr17	6366372	6366373	chr17:6366373:T:C	rs1514027	T	C	T	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr17	6393596	6393597	chr17:6393597:G:A	rs1467139	G	A	G	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr17	6475655	6475656	chr17:6475656:T:C	rs4796502	T	C	C	Hoxd9_MA0913.1	17	0	-	0	0	.
chr17	6749676	6749677	chr17:6749677:A:G	rs1567347	A	G	A	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr17	6866018	6866019	chr17:6866019:T:C	rs77725983	T	C	C	Hoxd9_MA0913.1	29	0	+	0	0	.
chr17	7046936	7046937	chr17:7046937:T:C	rs11078664	T	C	t	Hoxd9_MA0913.1	3	1	-	8.32301137036169	6.4953924298665875	GCAATAAATA
chr17	7332736	7332737	chr17:7332737:G:A	rs2871334	G	A	G	Hoxd9_MA0913.1	14	0	-	0	0	.
chr17	7332747	7332748	chr17:7332748:T:C	rs112954715	T	C	T	Hoxd9_MA0913.1	3	1	-	8.32301137036169	6.4953924298665875	GCAATAAATA
chr17	7340340	7340341	chr17:7340341:T:C	rs4796406	T	C	T	Hoxd9_MA0913.1	15	0	-	0	0	.
chr17	7366053	7366054	chr17:7366054:C:T	rs4796409	C	T	C	Hoxd9_MA0913.1	16	0	-	0	0	.
chr17	7491856	7491857	chr17:7491857:G:A	rs35894069	G	A	G	Hoxd9_MA0913.1	29	0	+	0	0	.
chr17	7933499	7933500	chr17:7933500:A:G	rs4239114	A	G	G	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr17	8034454	8034455	chr17:8034455:G:C	rs35640187	G	C	G	Hoxd9_MA0913.1	24	0	+	0	0	.
chr17	8075500	8075501	chr17:8075501:T:A	rs57869918	T	A	T	Hoxd9_MA0913.1	13	0	+	0	0	.
chr17	8138683	8138684	chr17:8138684:T:C	chr17:8138684:T:C	T	C	T	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr17	8138693	8138694	chr17:8138694:A:G	rs76555643	A	G	A	Hoxd9_MA0913.1	2	1	+	7.973723031895638	6.29626459043754	GCAGTAAAAA
chr17	8138695	8138696	chr17:8138696:T:C	rs148590010	T	C	T	Hoxd9_MA0913.1	4	1	+	7.973723031895638	4.681588780120659	GCAGTAAAAA
chr17	8153560	8153561	chr17:8153561:G:A	rs941672921	G	A	G	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr17	8174043	8174044	chr17:8174044:G:A	rs73245431	G	A	.	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr17	8200320	8200321	chr17:8200321:A:C	rs1255414411	A	C	A	Hoxd9_MA0913.1	2	1	+	7.105164557570679	6.183495360600337	GCAATTAAGC
chr17	8200341	8200342	chr17:8200342:A:G	rs547154605	A	G	A	Hoxd9_MA0913.1	23	0	+	0	0	.
chr17	8352802	8352803	chr17:8352803:T:C	rs8067956	T	C	C	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr17	8557838	8557839	chr17:8557839:C:T	rs139220922	C	T	C	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr17	8606092	8606093	chr17:8606093:A:T	rs12449581	A	T	A	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr17	8997553	8997554	chr17:8997554:T:A	rs2078819	T	A	T	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr17	9045223	9045224	chr17:9045224:C:T	rs34094467	C	T	C	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr17	9109350	9109351	chr17:9109351:A:G	rs74932871	A	G	A	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr17	9217403	9217404	chr17:9217404:T:G	rs1490634401	T	G	T	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr17	9256647	9256648	chr17:9256648:A:G	rs61409745	A	G	A	Hoxd9_MA0913.1	16	0	+	0	0	.
chr17	9257237	9257238	chr17:9257238:A:G	rs7359572	A	G	A	Hoxd9_MA0913.1	2	1	+	9.760171550280933	8.082713108822833	GCAATTAAAA
chr17	9271875	9271876	chr17:9271876:A:G	rs12603633	A	G	A	Hoxd9_MA0913.1	10	0	+	0	0	.
chr17	9272907	9272908	chr17:9272908:C:T	rs12936575	C	T	C	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr17	9346792	9346793	chr17:9346793:A:G	rs59987625	A	G	G	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr17	9410487	9410488	chr17:9410488:G:A	rs149497123	G	A	G	Hoxd9_MA0913.1	18	0	+	0	0	.
chr17	9509767	9509768	chr17:9509768:C:T	rs4791848	C	T	C	Hoxd9_MA0913.1	28	0	+	0	0	.
chr17	9544512	9544513	chr17:9544513:A:C	rs4791349	A	C	a	Hoxd9_MA0913.1	15	0	+	0	0	.
chr17	9711238	9711239	chr17:9711239:A:G	rs2654725	A	G	G	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr17	9818161	9818162	chr17:9818162:T:A	rs8071852	T	A	A	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr17	9865744	9865745	chr17:9865745:T:A	rs73974316	T	A	T	Hoxd9_MA0913.1	14	0	+	0	0	.
chr17	9866317	9866318	chr17:9866318:G:A	rs4791898	G	A	A	Hoxd9_MA0913.1	23	0	-	0	0	.
chr17	10023834	10023835	chr17:10023835:A:T	rs1986266	A	T	T	Hoxd9_MA0913.1	14	0	+	0	0	.
chr17	10032664	10032665	chr17:10032665:A:G	rs8077488	A	G	G	Hoxd9_MA0913.1	28	0	+	0	0	.
chr17	10095466	10095467	chr17:10095467:C:T	rs147406590	C	T	C	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr17	10095468	10095469	chr17:10095469:G:A	chr17:10095469:G:A	G	A	G	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr17	10171641	10171642	chr17:10171642:C:T	rs72810926	C	T	C	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr17	10183026	10183027	chr17:10183027:G:C	rs11656779	G	C	C	Hoxd9_MA0913.1	29	0	+	0	0	.
chr17	10218392	10218393	chr17:10218393:C:T	rs59389304	C	T	C	Hoxd9_MA0913.1	23	0	-	0	0	.
chr17	10337208	10337209	chr17:10337209:G:C	rs9906701	G	C	C	Hoxd9_MA0913.1	21	0	-	0	0	.
chr17	10429609	10429610	chr17:10429610:G:T	rs62058113	G	T	G	Hoxd9_MA0913.1	27	0	-	0	0	.
chr17	10748253	10748254	chr17:10748254:T:C	rs10852924	T	C	C	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr17	10920630	10920631	chr17:10920631:C:G	rs17770248	C	G	C	Hoxd9_MA0913.1	9	1	+	7.146334979680488	6.761880054163308	GCAATAAAGC
chr17	10992399	10992400	chr17:10992400:A:G	rs17771497	A	G	A	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr17	11384339	11384340	chr17:11384340:A:G	rs205054	A	G	A	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr17	11488008	11488009	chr17:11488009:A:G	rs888139	A	G	G	Hoxd9_MA0913.1	4	1	-	8.853608248980283	5.561473997205303	ACAATAAAAA
chr17	11564485	11564486	chr17:11564486:T:C	rs72809085	T	C	T	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr17	11742911	11742912	chr17:11742912:T:C	rs9906083	T	C	T	Hoxd9_MA0913.1	25	0	+	0	0	.
chr17	11758383	11758384	chr17:11758384:T:G	rs11078031	T	G	T	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr17	11816465	11816466	chr17:11816466:A:G	rs717786	A	G	A	Hoxd9_MA0913.1	23	0	+	0	0	.
chr17	11923634	11923635	chr17:11923635:T:C	rs73300406	T	C	C	Hoxd9_MA0913.1	4	1	+	8.853608248980283	5.561473997205303	ACAATAAAAA
chr17	12121891	12121892	chr17:12121892:G:C	rs8080333	G	C	C	Hoxd9_MA0913.1	27	0	+	0	0	.
chr17	12523207	12523208	chr17:12523208:C:T	rs74898653	C	T	C	Hoxd9_MA0913.1	15	0	-	0	0	.
chr17	12572072	12572073	chr17:12572073:G:T	rs79009619	G	T	G	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr17	12717579	12717580	chr17:12717580:G:A	rs12602716	G	A	G	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr17	12831014	12831015	chr17:12831015:C:T	rs7211203	C	T	C	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr17	12896986	12896987	chr17:12896987:A:C	rs16946773	A	C	A	Hoxd9_MA0913.1	5	1	+	8.853608248980283	5.418806477610913	ACAATAAAAA
chr17	12909951	12909952	chr17:12909952:A:G	rs73296315	A	G	A	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr17	12959041	12959042	chr17:12959042:G:A	rs9904572	G	A	G	Hoxd9_MA0913.1	17	0	+	0	0	.
chr17	12997583	12997584	chr17:12997584:C:T	rs55688720	C	T	c	Hoxd9_MA0913.1	25	0	-	0	0	.
chr17	13001807	13001808	chr17:13001808:T:C	rs56338821	T	C	T	Hoxd9_MA0913.1	13	0	+	0	0	.
chr17	13001821	13001822	chr17:13001822:G:A	rs56266951	G	A	A	Hoxd9_MA0913.1	27	0	+	0	0	.
chr17	13541227	13541228	chr17:13541228:T:C	rs978609570	T	C	T	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr17	13541238	13541239	chr17:13541239:A:G	rs11650867	A	G	A	Hoxd9_MA0913.1	7	1	+	7.062892160824505	0.22374768347016322	GCCATAAAGT
chr17	13544224	13544225	chr17:13544225:T:C	rs7222005	T	C	C	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr17	13598429	13598430	chr17:13598430:C:T	rs561600083	C	T	C	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr17	13621668	13621669	chr17:13621669:A:T	rs1013123	A	T	T	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr17	13621683	13621684	chr17:13621684:A:C	rs1013124	A	C	A	Hoxd9_MA0913.1	12	0	+	0	0	.
chr17	13690984	13690985	chr17:13690985:C:T	rs72810652	C	T	C	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr17	13869434	13869435	chr17:13869435:T:C	rs7220601	T	C	C	Hoxd9_MA0913.1	2	1	-	8.282172881897674	6.604714440439576	CCAATTAAAA
chr17	13888283	13888284	chr17:13888284:T:A	rs8065468	T	A	A	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr17	13922772	13922773	chr17:13922773:C:T	rs12603610	C	T	T	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr17	13995503	13995504	chr17:13995504:T:C	rs74990346	T	C	T	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr17	14004548	14004549	chr17:14004549:A:G	rs8067217	A	G	A	Hoxd9_MA0913.1	18	0	-	0	0	.
chr17	14081142	14081143	chr17:14081143:T:C	rs115162438	T	C	T	Hoxd9_MA0913.1	2	1	-	7.516695873490439	5.8392374320323395	GCAATTAACT
chr17	14302389	14302390	chr17:14302390:G:A	rs996202575	G	A	G	Hoxd9_MA0913.1	27	0	-	0	0	.
chr17	14322105	14322106	chr17:14322106:A:G	rs758048	A	G	A	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr17	14377211	14377212	chr17:14377212:A:G	rs12944383	A	G	A	Hoxd9_MA0913.1	8	1	+	8.853608248980283	7.280639671522341	ACAATAAAAA
chr17	14622974	14622975	chr17:14622975:C:A	rs1272815322	C	A	C	Hoxd9_MA0913.1	19	0	+	0	0	.
chr17	14623132	14623133	chr17:14623133:G:C	rs12939172	G	C	T	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr17	14671326	14671327	chr17:14671327:A:G	rs1019156	A	G	A	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr17	14681692	14681693	chr17:14681693:G:A	rs7226014	G	A	A	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr17	14840930	14840931	chr17:14840931:A:G	rs78011589	A	G	A	Hoxd9_MA0913.1	6	1	+	8.246554688443613	1.4311340206642729	GTCATTAAAT
chr17	14922180	14922181	chr17:14922181:T:A	rs2215298	T	A	T	Hoxd9_MA0913.1	17	0	+	0	0	.
chr17	15012691	15012692	chr17:15012692:A:G	rs8082037	A	G	G	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr17	15124985	15124986	chr17:15124986:G:C	rs983292	G	C	C	Hoxd9_MA0913.1	22	0	+	0	0	.
chr17	15170912	15170913	chr17:15170913:G:A	rs62072247	G	A	G	Hoxd9_MA0913.1	10	0	+	0	0	.
chr17	15291406	15291407	chr17:15291407:T:C	rs8073989	T	C	C	Hoxd9_MA0913.1	29	0	-	0	0	.
chr17	15377714	15377715	chr17:15377715:T:A	rs113035304	T	A	T	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr17	15439288	15439289	chr17:15439289:G:A	rs2906987	G	A	G	Hoxd9_MA0913.1	21	0	+	0	0	.
chr17	15981477	15981478	chr17:15981478:G:A	rs4791658	G	A	G	Hoxd9_MA0913.1	24	0	-	0	0	.
chr17	16383447	16383448	chr17:16383448:C:T	rs117233862	C	T	c	Hoxd9_MA0913.1	1	1	+	8.038028911113928	7.689893283384903	GCAATTAATT
chr17	16486157	16486158	chr17:16486158:G:A	rs78139010	G	A	G	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr17	16508072	16508073	chr17:16508073:A:G	rs571877	A	G	A	Hoxd9_MA0913.1	13	0	+	0	0	.
chr17	16921730	16921731	chr17:16921731:A:G	rs77869221	A	G	A	Hoxd9_MA0913.1	6	1	+	7.449498732439066	0.6340780646597248	GTCATAAAAC
chr17	16948027	16948028	chr17:16948028:C:T	rs11656532	C	T	T	Hoxd9_MA0913.1	18	0	+	0	0	.
chr17	17043676	17043677	chr17:17043677:C:G	rs73277607	C	G	.	Hoxd9_MA0913.1	24	0	+	0	0	.
chr17	17081104	17081105	chr17:17081105:A:G	rs4264448	A	G	A	Hoxd9_MA0913.1	24	0	-	0	0	.
chr17	17292617	17292618	chr17:17292618:T:C	rs112954036	T	C	T	Hoxd9_MA0913.1	12	0	-	0	0	.
chr17	17369821	17369822	chr17:17369822:G:C	rs955892	G	C	C	Hoxd9_MA0913.1	24	0	-	0	0	.
chr17	17376457	17376458	chr17:17376458:C:A	rs539694727	C	A	C	Hoxd9_MA0913.1	28	0	-	0	0	.
chr17	17381753	17381754	chr17:17381754:G:T	rs9909266	G	T	T	Hoxd9_MA0913.1	28	0	-	0	0	.
chr17	17457822	17457823	chr17:17457823:T:C	rs1269402	T	C	T	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr17	17604590	17604591	chr17:17604591:A:G	rs35851484	A	G	A	Hoxd9_MA0913.1	26	0	-	0	0	.
chr17	17718821	17718822	chr17:17718822:C:G	rs9914733	C	G	C	Hoxd9_MA0913.1	22	0	+	0	0	.
chr17	17922836	17922837	chr17:17922837:G:T	chr17:17922837:G:T	G	T	g	Hoxd9_MA0913.1	25	0	-	0	0	.
chr17	18004631	18004632	chr17:18004632:C:T	rs147402856	C	T	C	Hoxd9_MA0913.1	26	0	-	0	0	.
chr17	18182731	18182732	chr17:18182732:A:G	chr17:18182732:A:G	A	G	a	Hoxd9_MA0913.1	24	0	-	0	0	.
chr17	18326137	18326138	chr17:18326138:T:A	rs12949119	T	A	A	Hoxd9_MA0913.1	12	0	+	0	0	.
chr17	18418521	18418522	chr17:18418522:G:T	rs470526	G	T	g	Hoxd9_MA0913.1	0	1	+	7.943390935685037	4.906248239732167	GCAATTAAGT
chr17	18453903	18453904	chr17:18453904:G:A	rs77085790	G	A	N	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr17	18453925	18453926	chr17:18453926:C:T	rs79787939	C	T	c	Hoxd9_MA0913.1	20	0	+	0	0	.
chr17	18949486	18949487	chr17:18949487:T:C	rs1555142	T	C	T	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr17	19246415	19246416	chr17:19246416:C:G	rs564174357	C	G	c	Hoxd9_MA0913.1	10	0	+	0	0	.
chr17	19570763	19570764	chr17:19570764:G:A	rs2253611	G	A	G	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr17	19725693	19725694	chr17:19725694:C:T	rs144165227	C	T	T	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr17	19734237	19734238	chr17:19734238:G:A	rs11650088	G	A	g	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr17	20063533	20063534	chr17:20063534:C:T	rs8066705	C	T	C	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr17	20080377	20080378	chr17:20080378:T:G	rs16960678	T	G	T	Hoxd9_MA0913.1	12	0	-	0	0	.
chr17	20083547	20083548	chr17:20083548:T:A	rs4925079	T	A	T	Hoxd9_MA0913.1	24	0	-	0	0	.
chr17	20094556	20094557	chr17:20094557:T:C	rs7208025	T	C	T	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr17	20095175	20095176	chr17:20095176:C:T	rs73981808	C	T	C	Hoxd9_MA0913.1	11	0	+	0	0	.
chr17	20096095	20096096	chr17:20096096:G:A	rs888423	G	A	G	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr17	20120781	20120782	chr17:20120782:A:G	rs17759959	A	G	A	Hoxd9_MA0913.1	22	0	-	0	0	.
chr17	20196460	20196461	chr17:20196461:G:A	rs528401473	G	A	G	Hoxd9_MA0913.1	26	0	-	0	0	.
chr17	20226177	20226178	chr17:20226178:A:G	rs16960730	A	G	A	Hoxd9_MA0913.1	13	0	-	0	0	.
chr17	20284650	20284651	chr17:20284651:C:T	rs147098222	C	T	.	Hoxd9_MA0913.1	9	1	-	8.334848631621252	9.801341972390743	GCAATAAAAG
chr17	20302997	20302998	chr17:20302998:G:A	rs62066879	G	A	.	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr17	20525891	20525892	chr17:20525892:A:G	rs373276075	A	G	N	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr17	20771843	20771844	chr17:20771844:C:G	rs6587085	C	G	C	Hoxd9_MA0913.1	10	0	+	0	0	.
chr17	21001925	21001926	chr17:21001926:C:T	rs148027316	C	T	C	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr17	21001926	21001927	chr17:21001927:G:A	rs923167784	G	A	G	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr17	21039283	21039284	chr17:21039284:T:C	rs537160981	T	C	T	Hoxd9_MA0913.1	5	1	-	7.7976343601680895	1.5759712072722212	GCCATAAAAC
chr17	21138161	21138162	chr17:21138162:C:T	rs73305688	C	T	c	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr17	21318773	21318774	chr17:21318774:G:T	rs73302090	G	T	g	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr17	21331997	21331998	chr17:21331998:T:C	rs35636865	T	C	t	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr17	21371066	21371067	chr17:21371067:C:A	rs78776846	C	A	A	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr17	21452146	21452147	chr17:21452147:T:C	rs73303413	T	C	T	Hoxd9_MA0913.1	17	0	-	0	0	.
chr17	21478832	21478833	chr17:21478833:G:A	rs61023219	G	A	G	Hoxd9_MA0913.1	23	0	+	0	0	.
chr17	21704787	21704788	chr17:21704788:T:C	rs1411763797	T	C	.	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr17	21704788	21704789	chr17:21704789:G:T	rs1157369803	G	T	.	Hoxd9_MA0913.1	0	1	+	7.986713003892226	4.949570307939356	GTAATAAAAG
chr17	21834467	21834468	chr17:21834468:T:C	rs1424931663	T	C	.	Hoxd9_MA0913.1	29	0	-	0	0	.
chr17	22139908	22139909	chr17:22139909:G:A	rs1457472143	G	A	.	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr17	26774478	26774479	chr17:26774479:G:A	rs1339538684	G	A	N	Hoxd9_MA0913.1	2	1	-	8.879672775420401	3.3509979405399606	GCCATAAAAA
chr17	27109645	27109646	chr17:27109646:C:G	rs9303617	C	G	g	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr17	27272292	27272293	chr17:27272293:A:G	rs4795545	A	G	G	Hoxd9_MA0913.1	20	0	-	0	0	.
chr17	27378726	27378727	chr17:27378727:C:T	rs322185	C	T	C	Hoxd9_MA0913.1	17	0	+	0	0	.
chr17	27537685	27537686	chr17:27537686:A:G	rs61074378	A	G	A	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr17	27651602	27651603	chr17:27651603:A:T	rs118028618	A	T	A	Hoxd9_MA0913.1	28	0	+	0	0	.
chr17	27695204	27695205	chr17:27695205:G:T	rs73261364	G	T	G	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr17	27756892	27756893	chr17:27756893:A:G	rs56090761	A	G	A	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr17	27794000	27794001	chr17:27794001:C:A	rs531702176	C	A	C	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr17	28171021	28171022	chr17:28171022:T:C	rs2125846	T	C	T	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr17	28326275	28326276	chr17:28326276:G:A	rs188189867	G	A	G	Hoxd9_MA0913.1	19	0	-	0	0	.
chr17	28532891	28532892	chr17:28532892:T:C	rs683289	T	C	T	Hoxd9_MA0913.1	23	0	+	0	0	.
chr17	28752536	28752537	chr17:28752537:C:T	rs34693224	C	T	C	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr17	28795941	28795942	chr17:28795942:A:T	rs35398767	A	T	A	Hoxd9_MA0913.1	7	1	+	7.265533775852649	3.9716870241342184	GCCATTAAGA
chr17	28816873	28816874	chr17:28816874:A:G	rs17721128	A	G	A	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr17	29046037	29046038	chr17:29046038:C:G	rs112560129	C	G	C	Hoxd9_MA0913.1	27	0	-	0	0	.
chr17	29233707	29233708	chr17:29233708:A:G	rs8081159	A	G	G	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr17	29386226	29386227	chr17:29386227:T:A	rs7218758	T	A	A	Hoxd9_MA0913.1	13	0	+	0	0	.
chr17	29472140	29472141	chr17:29472141:G:C	rs2559621	G	C	C	Hoxd9_MA0913.1	22	0	-	0	0	.
chr17	29530679	29530680	chr17:29530680:C:T	rs536327	C	T	T	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr17	29854519	29854520	chr17:29854520:T:C	rs75486571	T	C	T	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr17	30537891	30537892	chr17:30537892:T:C	rs216473	T	C	t	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr17	30539725	30539726	chr17:30539726:A:C	rs216477	A	C	N	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr17	30701531	30701532	chr17:30701532:A:T	rs28870673	A	T	.	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr17	30761686	30761687	chr17:30761687:G:C	rs189008250	G	C	.	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr17	30860478	30860479	chr17:30860479:A:G	rs9896095	A	G	G	Hoxd9_MA0913.1	28	0	+	0	0	.
chr17	30961176	30961177	chr17:30961177:G:A	rs8066682	G	A	A	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr17	31096048	31096049	chr17:31096049:A:C	rs17882689	A	C	A	Hoxd9_MA0913.1	20	0	-	0	0	.
chr17	31390408	31390409	chr17:31390409:G:A	rs113297709	G	A	G	Hoxd9_MA0913.1	28	0	+	0	0	.
chr17	31406630	31406631	chr17:31406631:T:A	rs929286	T	A	T	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr17	31406631	31406632	chr17:31406632:T:C	rs929287	T	C	T	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr17	31537796	31537797	chr17:31537797:C:A	rs75629221	C	A	C	Hoxd9_MA0913.1	11	0	+	0	0	.
chr17	31537814	31537815	chr17:31537815:C:T	rs111605159	C	T	C	Hoxd9_MA0913.1	29	0	+	0	0	.
chr17	31561574	31561575	chr17:31561575:A:G	rs75259244	A	G	a	Hoxd9_MA0913.1	15	0	+	0	0	.
chr17	31673409	31673410	chr17:31673410:G:A	rs425809	G	A	G	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr17	31744747	31744748	chr17:31744748:T:G	rs58143895	T	G	T	Hoxd9_MA0913.1	9	1	-	9.801341972390743	8.719303557138431	GCAATAAAAA
chr17	31824984	31824985	chr17:31824985:G:C	chr17:31824985:G:C	G	C	G	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr17	31957064	31957065	chr17:31957065:G:A	rs72823789	G	A	G	Hoxd9_MA0913.1	21	0	-	0	0	.
chr17	32123973	32123974	chr17:32123974:G:C	rs116689123	G	C	G	Hoxd9_MA0913.1	19	0	-	0	0	.
chr17	32141890	32141891	chr17:32141891:A:C	rs1008406070	A	C	A	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr17	32311302	32311303	chr17:32311303:G:A	rs116409826	G	A	G	Hoxd9_MA0913.1	26	0	-	0	0	.
chr17	32591438	32591439	chr17:32591439:A:G	rs11080182	A	G	A	Hoxd9_MA0913.1	23	0	+	0	0	.
chr17	32618109	32618110	chr17:32618110:T:C	rs6505307	T	C	T	Hoxd9_MA0913.1	27	0	-	0	0	.
chr17	32623403	32623404	chr17:32623404:T:C	rs192076523	T	C	T	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr17	32658450	32658451	chr17:32658451:A:G	rs2729337	A	G	G	Hoxd9_MA0913.1	22	0	+	0	0	.
chr17	32817438	32817439	chr17:32817439:T:C	rs28590765	T	C	T	Hoxd9_MA0913.1	19	0	+	0	0	.
chr17	32863844	32863845	chr17:32863845:T:C	rs2470217	T	C	C	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr17	33162731	33162732	chr17:33162732:C:G	rs9303661	C	G	C	Hoxd9_MA0913.1	11	0	-	0	0	.
chr17	33260888	33260889	chr17:33260889:G:A	rs880305	G	A	G	Hoxd9_MA0913.1	26	0	-	0	0	.
chr17	33284394	33284395	chr17:33284395:A:G	rs16968227	A	G	G	Hoxd9_MA0913.1	28	0	+	0	0	.
chr17	33422148	33422149	chr17:33422149:T:C	rs77098170	T	C	T	Hoxd9_MA0913.1	22	0	-	0	0	.
chr17	33422167	33422168	chr17:33422168:T:C	rs35578035	T	C	C	Hoxd9_MA0913.1	3	1	-	8.838502353310592	7.010883412815486	GCCATTAAAA
chr17	33427596	33427597	chr17:33427597:T:C	rs4795783	T	C	C	Hoxd9_MA0913.1	27	0	+	0	0	.
chr17	33552259	33552260	chr17:33552260:C:T	rs9910987	C	T	C	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr17	33773348	33773349	chr17:33773349:A:C	rs4261592	A	C	C	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr17	33794715	33794716	chr17:33794716:A:G	rs1490925	A	G	G	Hoxd9_MA0913.1	29	0	+	0	0	.
chr17	33888699	33888700	chr17:33888700:C:T	rs66635051	C	T	C	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr17	33888714	33888715	chr17:33888715:A:G	rs67361277	A	G	A	Hoxd9_MA0913.1	3	1	+	9.760171550280933	7.932552609785828	GCAATTAAAA
chr17	33968487	33968488	chr17:33968488:G:A	rs8070999	G	A	A	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr17	34248632	34248633	chr17:34248633:C:T	rs77251345	C	T	C	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr17	34312435	34312436	chr17:34312436:A:G	rs3848465	A	G	G	Hoxd9_MA0913.1	27	0	+	0	0	.
chr17	34327830	34327831	chr17:34327831:G:A	rs1897351	G	A	g	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr17	34385386	34385387	chr17:34385387:A:T	rs60011577	A	T	A	Hoxd9_MA0913.1	6	1	+	9.412035922551908	6.988715975017923	GTAATTAAAA
chr17	34393262	34393263	chr17:34393263:C:A	rs159262	C	A	C	Hoxd9_MA0913.1	20	0	-	0	0	.
chr17	34412573	34412574	chr17:34412574:A:G	rs159247	A	G	A	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr17	34412622	34412623	chr17:34412623:T:C	rs150509	T	C	C	Hoxd9_MA0913.1	29	0	+	0	0	.
chr17	34670980	34670981	chr17:34670981:T:G	rs4795019	T	G	T	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr17	34670982	34670983	chr17:34670983:G:A	rs6416978	G	A	A	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr17	34728920	34728921	chr17:34728921:T:C	rs8065278	T	C	C	Hoxd9_MA0913.1	19	0	-	0	0	.
chr17	34730792	34730793	chr17:34730793:G:A	rs558408447	G	A	G	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr17	34819444	34819445	chr17:34819445:C:T	rs11654996	C	T	C	Hoxd9_MA0913.1	1	1	+	7.265533775852649	6.917398148123624	GCCATTAAGA
chr17	34987358	34987359	chr17:34987359:C:T	rs3135970	C	T	C	Hoxd9_MA0913.1	10	0	-	0	0	.
chr17	35022571	35022572	chr17:35022572:G:A	rs185649762	G	A	G	Hoxd9_MA0913.1	17	0	+	0	0	.
chr17	35063149	35063150	chr17:35063150:G:C	rs12453568	G	C	G	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr17	35165382	35165383	chr17:35165383:G:A	rs9303682	G	A	A	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr17	35244883	35244884	chr17:35244884:A:G	rs9901184	A	G	A	Hoxd9_MA0913.1	5	1	+	7.931939052009941	1.7102758991140732	ACCATAAAAA
chr17	35256757	35256758	chr17:35256758:A:G	rs143135134	A	G	A	Hoxd9_MA0913.1	3	1	+	8.531537147691377	6.703918207196272	GTCATAAAAA
chr17	35555700	35555701	chr17:35555701:C:T	rs321616	C	T	C	Hoxd9_MA0913.1	20	0	+	0	0	.
chr17	35901469	35901470	chr17:35901470:C:T	rs56294660	C	T	C	Hoxd9_MA0913.1	15	0	+	0	0	.
chr17	35976246	35976247	chr17:35976247:C:T	rs76570261	C	T	C	Hoxd9_MA0913.1	0	1	-	7.839067345093966	6.891333621683506	GTAATTAAGA
chr17	35976275	35976276	chr17:35976276:T:C	rs80329614	T	C	T	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr17	36027845	36027846	chr17:36027846:T:C	rs854661	T	C	C	Hoxd9_MA0913.1	7	1	-	8.490366725581566	1.651222248227224	GTCATTAAAA
chr17	36079547	36079548	chr17:36079548:A:G	rs11651881	A	G	G	Hoxd9_MA0913.1	6	1	+	8.32301137036169	1.5075907025823505	GCAATAAATA
chr17	36202019	36202020	chr17:36202020:T:C	rs368902459	T	C	.	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr17	36207767	36207768	chr17:36207768:A:C	rs571343020	A	C	.	Hoxd9_MA0913.1	5	1	-	8.246554688443613	2.0660619576575554	GTCATTAAAT
chr17	36578794	36578795	chr17:36578795:C:T	rs116983680	C	T	C	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr17	36716707	36716708	chr17:36716708:G:A	rs11263789	G	A	G	Hoxd9_MA0913.1	10	0	-	0	0	.
chr17	36787411	36787412	chr17:36787412:A:G	rs1497200	A	G	A	Hoxd9_MA0913.1	9	1	+	8.838502353310592	7.3720090125411	GCCATTAAAA
chr17	36868941	36868942	chr17:36868942:C:T	rs78934119	C	T	c	Hoxd9_MA0913.1	23	0	-	0	0	.
chr17	37198944	37198945	chr17:37198945:A:C	rs145435380	A	C	A	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr17	37430776	37430777	chr17:37430777:A:G	rs562020426	A	G	A	Hoxd9_MA0913.1	4	1	-	8.853608248980283	5.561473997205303	ACAATAAAAA
chr17	37488120	37488121	chr17:37488121:G:A	rs115819924	G	A	G	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr17	37488148	37488149	chr17:37488149:C:A	rs853195	C	A	C	Hoxd9_MA0913.1	13	0	+	0	0	.
chr17	37546815	37546816	chr17:37546816:T:C	rs3110621	T	C	A	Hoxd9_MA0913.1	27	0	+	0	0	.
chr17	37642930	37642931	chr17:37642931:C:G	rs115367099	C	G	C	Hoxd9_MA0913.1	25	0	+	0	0	.
chr17	37676423	37676424	chr17:37676424:C:T	rs76481015	C	T	C	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr17	37677537	37677538	chr17:37677538:G:A	rs3094519	G	A	G	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr17	37774640	37774641	chr17:37774641:C:T	rs11651721	C	T	C	Hoxd9_MA0913.1	25	0	+	0	0	.
chr17	37838710	37838711	chr17:37838711:C:T	rs8069182	C	T	T	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr17	37885616	37885617	chr17:37885617:A:G	rs116864658	A	G	A	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr17	38361945	38361946	chr17:38361946:G:A	rs4795269	G	A	G	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr17	38407654	38407655	chr17:38407655:C:T	rs4795273	C	T	t	Hoxd9_MA0913.1	16	0	-	0	0	.
chr17	38478699	38478700	chr17:38478700:T:C	rs7501841	T	C	C	Hoxd9_MA0913.1	28	0	-	0	0	.
chr17	38976469	38976470	chr17:38976470:G:A	rs59934140	G	A	G	Hoxd9_MA0913.1	24	0	+	0	0	.
chr17	38981040	38981041	chr17:38981041:A:G	rs62075223	A	G	a	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr17	38981045	38981046	chr17:38981046:C:T	rs9893946	C	T	N	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr17	39098741	39098742	chr17:39098742:C:A	rs11868721	C	A	C	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr17	39425182	39425183	chr17:39425183:G:A	rs71369762	G	A	G	Hoxd9_MA0913.1	29	0	-	0	0	.
chr17	39441494	39441495	chr17:39441495:C:T	rs11867312	C	T	C	Hoxd9_MA0913.1	25	0	+	0	0	.
chr17	39632689	39632690	chr17:39632690:C:T	rs967798776	C	T	C	Hoxd9_MA0913.1	0	1	-	8.334848631621252	7.387114908210791	GCAATAAAAG
chr17	39657208	39657209	chr17:39657209:G:A	rs2952139	G	A	G	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr17	39872906	39872907	chr17:39872907:T:G	rs28651240	T	G	T	Hoxd9_MA0913.1	11	0	-	0	0	.
chr17	40011739	40011740	chr17:40011740:T:C	rs9894543	T	C	t	Hoxd9_MA0913.1	12	0	+	0	0	.
chr17	40471748	40471749	chr17:40471749:G:T	rs475087	G	T	T	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr17	40618897	40618898	chr17:40618898:C:T	rs757411	C	T	C	Hoxd9_MA0913.1	12	0	-	0	0	.
chr17	40697803	40697804	chr17:40697804:C:T	rs78115646	C	T	C	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr17	40787363	40787364	chr17:40787364:T:A	rs17473903	T	A	T	Hoxd9_MA0913.1	19	0	-	0	0	.
chr17	40851041	40851042	chr17:40851042:A:G	rs11871588	A	G	A	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr17	40854749	40854750	chr17:40854750:T:C	rs16966347	T	C	T	Hoxd9_MA0913.1	3	1	-	8.079199333223738	6.251580392728633	GCAATAAATT
chr17	40936673	40936674	chr17:40936674:A:G	rs536781892	A	G	A	Hoxd9_MA0913.1	24	0	-	0	0	.
chr17	41044286	41044287	chr17:41044287:A:G	rs76112614	A	G	G	Hoxd9_MA0913.1	1	1	-	8.287725110553424	8.635860738282448	GTCATAAAAT
chr17	41061126	41061127	chr17:41061127:T:G	rs349777	T	G	G	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr17	41092011	41092012	chr17:41092012:C:A	rs4986673	C	A	c	Hoxd9_MA0913.1	23	0	+	0	0	.
chr17	41107138	41107139	chr17:41107139:G:A	rs4247139	G	A	g	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr17	41256735	41256736	chr17:41256736:G:C	rs2007242	G	C	-	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr17	41380308	41380309	chr17:41380309:A:G	chr17:41380309:A:G	A	G	A	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr17	41676676	41676677	chr17:41676677:G:C	rs73297998	G	C	C	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr17	42387736	42387737	chr17:42387737:C:A	rs3736163	C	A	C	Hoxd9_MA0913.1	15	0	+	0	0	.
chr17	42560398	42560399	chr17:42560399:G:C	rs621141	G	C	C	Hoxd9_MA0913.1	3	1	+	7.7299109947576845	5.091299264852733	GCAGTAAAAT
chr17	43002199	43002200	chr17:43002200:A:G	rs1567832	A	G	A	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr17	43125621	43125622	chr17:43125622:C:A	rs963681962	C	A	C	Hoxd9_MA0913.1	15	0	+	0	0	.
chr17	43444155	43444156	chr17:43444156:A:G	rs62080675	A	G	A	Hoxd9_MA0913.1	11	0	-	0	0	.
chr17	43541308	43541309	chr17:43541309:C:G	rs12603189	C	G	G	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr17	43733425	43733426	chr17:43733426:A:G	rs79439235	A	G	A	Hoxd9_MA0913.1	29	0	+	0	0	.
chr17	43759087	43759088	chr17:43759088:G:A	rs117857467	G	A	G	Hoxd9_MA0913.1	12	0	-	0	0	.
chr17	43928246	43928247	chr17:43928247:A:G	rs189140	A	G	A	Hoxd9_MA0913.1	19	0	-	0	0	.
chr17	43945869	43945870	chr17:43945870:C:A	rs57318579	C	A	C	Hoxd9_MA0913.1	24	0	+	0	0	.
chr17	44146654	44146655	chr17:44146655:A:G	rs12601855	A	G	A	Hoxd9_MA0913.1	21	0	-	0	0	.
chr17	44233850	44233851	chr17:44233851:G:T	rs55805524	G	T	G	Hoxd9_MA0913.1	0	1	-	8.282172881897674	8.812437826870472	CCAATTAAAA
chr17	44782119	44782120	chr17:44782120:C:G	rs12949838	C	G	C	Hoxd9_MA0913.1	18	0	-	0	0	.
chr17	44865722	44865723	chr17:44865723:C:T	rs11658874	C	T	T	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr17	44898745	44898746	chr17:44898746:C:T	rs8068761	C	T	T	Hoxd9_MA0913.1	0	1	-	8.719303557138431	7.7715698337279715	GCAATAAAAC
chr17	45007086	45007087	chr17:45007087:G:A	rs75353403	G	A	G	Hoxd9_MA0913.1	14	0	+	0	0	.
chr17	45063626	45063627	chr17:45063627:A:G	rs113170866	A	G	a	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr17	45190728	45190729	chr17:45190729:G:A	rs1345616179	G	A	G	Hoxd9_MA0913.1	17	0	-	0	0	.
chr17	45949027	45949028	chr17:45949028:A:G	rs62062794	A	G	A	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr17	45958762	45958763	chr17:45958763:C:T	rs112916880	C	T	C	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr17	46023539	46023540	chr17:46023540:A:G	rs62062295	A	G	A	Hoxd9_MA0913.1	3	1	+	8.853608248980283	7.025989308485178	ACAATAAAAA
chr17	46023549	46023550	chr17:46023550:C:T	rs62062296	C	T	T	Hoxd9_MA0913.1	13	0	+	0	0	.
chr17	46206394	46206395	chr17:46206395:A:T	rs2696456	A	T	-	Hoxd9_MA0913.1	4	1	-	8.287725110553424	5.600473686367267	GTCATAAAAT
chr17	46270360	46270361	chr17:46270361:A:T	rs2532332	A	T	.	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr17	46275254	46275255	chr17:46275255:A:G	rs2696537	A	G	.	Hoxd9_MA0913.1	2	1	+	8.323343304007485	6.645884862549387	CCAATAAAAA
chr17	46275272	46275273	chr17:46275273:G:A	rs36039990	G	A	.	Hoxd9_MA0913.1	20	0	+	0	0	.
chr17	46286102	46286103	chr17:46286103:G:A	rs56022834	G	A	.	Hoxd9_MA0913.1	23	0	+	0	0	.
chr17	46736765	46736766	chr17:46736766:T:A	rs6503809	T	A	T	Hoxd9_MA0913.1	26	0	-	0	0	.
chr17	46759286	46759287	chr17:46759287:G:A	rs199530	G	A	G	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr17	46836152	46836153	chr17:46836153:C:T	rs113653655	C	T	c	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr17	46985109	46985110	chr17:46985110:A:G	rs8065103	A	G	.	Hoxd9_MA0913.1	9	1	-	7.7299109947576845	6.891684616643326	GCAGTAAAAT
chr17	47201423	47201424	chr17:47201424:G:A	rs16941650	G	A	G	Hoxd9_MA0913.1	18	0	-	0	0	.
chr17	47239655	47239656	chr17:47239656:A:G	rs16941731	A	G	A	Hoxd9_MA0913.1	1	1	-	8.287725110553424	8.635860738282448	GTCATAAAAT
chr17	47275568	47275569	chr17:47275569:C:T	rs8069732	C	T	C	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr17	47468011	47468012	chr17:47468012:T:G	rs2085755	T	G	t	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr17	47616248	47616249	chr17:47616249:C:T	rs111415999	C	T	C	Hoxd9_MA0913.1	3	1	-	7.7299109947576845	9.55752993525279	GCAGTAAAAT
chr17	47999732	47999733	chr17:47999733:A:G	rs17617360	A	G	A	Hoxd9_MA0913.1	27	0	-	0	0	.
chr17	48003674	48003675	chr17:48003675:G:T	rs757351	G	T	G	Hoxd9_MA0913.1	20	0	-	0	0	.
chr17	48067837	48067838	chr17:48067838:A:G	rs12950225	A	G	A	Hoxd9_MA0913.1	21	0	-	0	0	.
chr17	48383162	48383163	chr17:48383163:C:T	rs72827854	C	T	C	Hoxd9_MA0913.1	16	0	-	0	0	.
chr17	48391467	48391468	chr17:48391468:C:G	rs4793816	C	G	G	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr17	48439862	48439863	chr17:48439863:T:C	rs12452277	T	C	T	Hoxd9_MA0913.1	21	0	-	0	0	.
chr17	48510968	48510969	chr17:48510969:C:T	rs2036764	C	T	C	Hoxd9_MA0913.1	0	1	-	8.719303557138431	7.7715698337279715	GCAATAAAAC
chr17	48528777	48528778	chr17:48528778:G:A	rs143483917	G	A	G	Hoxd9_MA0913.1	26	0	+	0	0	.
chr17	48539292	48539293	chr17:48539293:C:T	rs9894600	C	T	C	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr17	48547188	48547189	chr17:48547189:G:A	chr17:48547189:G:A	G	A	G	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr17	48547746	48547747	chr17:48547747:T:C	rs12951076	T	C	T	Hoxd9_MA0913.1	2	1	-	8.853608248980283	7.176149807522183	ACAATAAAAA
chr17	48573698	48573699	chr17:48573699:T:C	rs2288277	T	C	C	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr17	48577072	48577073	chr17:48577073:A:G	rs79154089	A	G	G	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr17	48580564	48580565	chr17:48580565:G:A	rs3809782	G	A	G	Hoxd9_MA0913.1	13	0	-	0	0	.
chr17	48625697	48625698	chr17:48625698:C:G	rs543888333	C	G	C	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr17	48625706	48625707	chr17:48625707:C:G	rs192619342	C	G	C	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr17	48661098	48661099	chr17:48661099:C:T	rs113451991	C	T	-	Hoxd9_MA0913.1	24	0	-	0	0	.
chr17	48724713	48724714	chr17:48724714:T:C	chr17:48724714:T:C	T	C	T	Hoxd9_MA0913.1	8	1	-	7.890768629900132	6.317800052442189	ACCATTAAAA
chr17	48748320	48748321	chr17:48748321:G:A	rs7208477	G	A	G	Hoxd9_MA0913.1	19	0	-	0	0	.
chr17	48900099	48900100	chr17:48900100:T:G	rs2643361	T	G	G	Hoxd9_MA0913.1	15	0	+	0	0	.
chr17	48909862	48909863	chr17:48909863:T:G	rs117775380	T	G	T	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr17	49122069	49122070	chr17:49122070:G:A	rs62078439	G	A	g	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr17	49129729	49129730	chr17:49129730:C:G	rs12149980	C	G	C	Hoxd9_MA0913.1	0	1	-	7.557866295600249	6.079867627216991	GCAATAAACT
chr17	49359151	49359152	chr17:49359152:G:A	rs56010116	G	A	G	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr17	49402528	49402529	chr17:49402529:C:G	rs7208925	C	G	c	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr17	50253682	50253683	chr17:50253683:G:A	rs11653170	G	A	G	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr17	50348787	50348788	chr17:50348788:G:C	rs72832439	G	C	G	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr17	50423996	50423997	chr17:50423997:G:A	rs80052401	G	A	g	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr17	50431398	50431399	chr17:50431399:A:G	rs79512866	A	G	A	Hoxd9_MA0913.1	16	0	+	0	0	.
chr17	50566199	50566200	chr17:50566200:C:T	rs116729193	C	T	C	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr17	50866367	50866368	chr17:50866368:C:G	rs549959638	C	G	C	Hoxd9_MA0913.1	20	0	-	0	0	.
chr17	50866371	50866372	chr17:50866372:G:A	rs1056554507	G	A	G	Hoxd9_MA0913.1	16	0	-	0	0	.
chr17	50866384	50866385	chr17:50866385:T:C	chr17:50866385:T:C	T	C	T	Hoxd9_MA0913.1	3	1	-	7.7976343601680895	5.970015419672985	GCCATAAAAC
chr17	50866387	50866388	chr17:50866388:C:A	rs903148379	C	A	C	Hoxd9_MA0913.1	0	1	-	7.7976343601680895	4.76049166421522	GCCATAAAAC
chr17	50892348	50892349	chr17:50892349:C:T	rs114518388	C	T	c	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr17	51072111	51072112	chr17:51072112:C:T	rs62062976	C	T	C	Hoxd9_MA0913.1	0	1	-	7.146334979680488	6.198601256270028	GCAATAAAGC
chr17	51289764	51289765	chr17:51289765:G:A	rs1272562603	G	A	G	Hoxd9_MA0913.1	1	1	-	8.853608248980283	8.505472621251258	ACAATAAAAA
chr17	51439676	51439677	chr17:51439677:C:T	rs139617259	C	T	C	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr17	51439862	51439863	chr17:51439863:C:T	rs1014129	C	T	C	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr17	51479681	51479682	chr17:51479682:G:C	rs8073766	G	C	G	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr17	51548261	51548262	chr17:51548262:C:T	rs9674730	C	T	C	Hoxd9_MA0913.1	24	0	+	0	0	.
chr17	51559907	51559908	chr17:51559908:C:T	rs76864272	C	T	C	Hoxd9_MA0913.1	0	1	-	7.801678332738202	6.853944609327742	GCAATAAACA
chr17	52366491	52366492	chr17:52366492:T:G	rs4239179	T	G	G	Hoxd9_MA0913.1	29	0	+	0	0	.
chr17	53563902	53563903	chr17:53563903:G:T	rs34713172	G	T	G	Hoxd9_MA0913.1	23	0	+	0	0	.
chr17	54058345	54058346	chr17:54058346:G:C	rs71385354	G	C	g	Hoxd9_MA0913.1	22	0	-	0	0	.
chr17	54124747	54124748	chr17:54124748:G:A	rs9913569	G	A	A	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr17	54352474	54352475	chr17:54352475:T:A	rs8079552	T	A	T	Hoxd9_MA0913.1	29	0	+	0	0	.
chr17	54864992	54864993	chr17:54864993:T:A	rs79327757	T	A	T	Hoxd9_MA0913.1	17	0	-	0	0	.
chr17	54886695	54886696	chr17:54886696:T:A	rs10515083	T	A	T	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr17	55322566	55322567	chr17:55322567:G:A	rs16955862	G	A	G	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr17	55827091	55827092	chr17:55827092:G:T	rs11079195	G	T	T	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr17	55859377	55859378	chr17:55859378:G:T	rs79394608	G	T	G	Hoxd9_MA0913.1	20	0	-	0	0	.
chr17	55863747	55863748	chr17:55863748:T:C	rs12602713	T	C	T	Hoxd9_MA0913.1	4	1	+	7.973723031895638	4.681588780120659	GCAGTAAAAA
chr17	56096824	56096825	chr17:56096825:C:T	rs9903185	C	T	C	Hoxd9_MA0913.1	0	1	-	7.801678332738202	6.853944609327742	GCAATAAACA
chr17	56619680	56619681	chr17:56619681:G:A	rs28667571	G	A	G	Hoxd9_MA0913.1	15	0	-	0	0	.
chr17	56966645	56966646	chr17:56966646:G:A	rs732646	G	A	G	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr17	57142934	57142935	chr17:57142935:A:T	rs12937786	A	T	A	Hoxd9_MA0913.1	13	0	+	0	0	.
chr17	57189037	57189038	chr17:57189038:C:T	rs56310625	C	T	C	Hoxd9_MA0913.1	25	0	+	0	0	.
chr17	57349699	57349700	chr17:57349700:A:G	rs792392	A	G	C	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr17	57376374	57376375	chr17:57376375:G:C	rs56170762	G	C	G	Hoxd9_MA0913.1	14	0	-	0	0	.
chr17	57458929	57458930	chr17:57458930:A:G	rs17834337	A	G	A	Hoxd9_MA0913.1	24	0	-	0	0	.
chr17	57530431	57530432	chr17:57530432:A:G	rs9908229	A	G	A	Hoxd9_MA0913.1	17	0	-	0	0	.
chr17	57748108	57748109	chr17:57748109:A:C	rs12949028	A	C	C	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr17	57760650	57760651	chr17:57760651:T:C	rs17738984	T	C	T	Hoxd9_MA0913.1	4	1	+	8.371167929409406	5.079033677634427	GTAATAAAAC
chr17	57794886	57794887	chr17:57794887:C:G	rs28843453	C	G	C	Hoxd9_MA0913.1	0	1	+	8.282172881897674	9.760171550280933	CCAATTAAAA
chr17	57834149	57834150	chr17:57834150:A:C	rs1443268	A	C	C	Hoxd9_MA0913.1	7	1	+	7.801678332738202	4.507831581019771	GCAATAAACA
chr17	57835608	57835609	chr17:57835609:T:C	rs722168	T	C	T	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr17	57946159	57946160	chr17:57946160:T:G	rs117638465	T	G	T	Hoxd9_MA0913.1	7	1	-	7.839067345093966	4.545220593375534	GTAATTAAGA
chr17	58147557	58147558	chr17:58147558:T:C	rs12603162	T	C	T	Hoxd9_MA0913.1	1	1	+	8.531537147691377	8.879672775420401	GTCATAAAAA
chr17	58995339	58995340	chr17:58995340:T:C	rs8081967	T	C	C	Hoxd9_MA0913.1	24	0	+	0	0	.
chr17	59155763	59155764	chr17:59155764:G:A	rs182208974	G	A	G	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr17	59294070	59294071	chr17:59294071:A:G	rs534242	A	G	G	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr17	59520308	59520309	chr17:59520309:T:C	rs4968383	T	C	T	Hoxd9_MA0913.1	3	1	-	8.812437826870472	6.984818886375368	ACAATTAAAA
chr17	59754240	59754241	chr17:59754241:A:G	rs148052227	A	G	A	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr17	59782650	59782651	chr17:59782651:C:T	rs575186337	C	T	C	Hoxd9_MA0913.1	11	0	+	0	0	.
chr17	59785230	59785231	chr17:59785231:T:C	rs2645469	T	C	C	Hoxd9_MA0913.1	16	0	-	0	0	.
chr17	59854952	59854953	chr17:59854953:T:A	rs1292066	T	A	A	Hoxd9_MA0913.1	14	0	-	0	0	.
chr17	59914013	59914014	chr17:59914014:T:G	rs12103623	T	G	T	Hoxd9_MA0913.1	9	1	-	8.853608248980283	7.7715698337279715	ACAATAAAAA
chr17	60102810	60102811	chr17:60102811:T:C	rs8075789	T	C	N	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr17	60427235	60427236	chr17:60427236:G:A	rs6503968	G	A	A	Hoxd9_MA0913.1	11	0	-	0	0	.
chr17	60476965	60476966	chr17:60476966:A:T	rs7213753	A	T	A	Hoxd9_MA0913.1	24	0	+	0	0	.
chr17	60518209	60518210	chr17:60518210:T:A	rs73330233	T	A	A	Hoxd9_MA0913.1	12	0	-	0	0	.
chr17	60817572	60817573	chr17:60817573:C:A	rs55760424	C	A	C	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr17	61231423	61231424	chr17:61231424:C:A	rs73326883	C	A	C	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr17	61250926	61250927	chr17:61250927:G:T	rs748008780	G	T	G	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr17	61252071	61252072	chr17:61252072:A:G	rs776117767	A	G	A	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr17	61252096	61252097	chr17:61252097:C:T	rs138957669	C	T	C	Hoxd9_MA0913.1	10	0	+	0	0	.
chr17	61383778	61383779	chr17:61383779:C:T	rs115196306	C	T	C	Hoxd9_MA0913.1	17	0	-	0	0	.
chr17	61383779	61383780	chr17:61383780:G:A	rs536490248	G	A	G	Hoxd9_MA0913.1	16	0	-	0	0	.
chr17	61419948	61419949	chr17:61419949:G:A	rs9898324	G	A	G	Hoxd9_MA0913.1	11	0	-	0	0	.
chr17	61616556	61616557	chr17:61616557:T:C	rs10515207	T	C	C	Hoxd9_MA0913.1	21	0	-	0	0	.
chr17	61809974	61809975	chr17:61809975:C:T	rs62068836	C	T	C	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr17	61937501	61937502	chr17:61937502:T:C	rs74257577	T	C	t	Hoxd9_MA0913.1	25	0	-	0	0	.
chr17	62170835	62170836	chr17:62170836:T:C	rs118044676	T	C	T	Hoxd9_MA0913.1	10	0	+	0	0	.
chr17	62747169	62747170	chr17:62747170:G:A	rs117832571	G	A	G	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr17	62770335	62770336	chr17:62770336:A:G	rs9915831	A	G	G	Hoxd9_MA0913.1	17	0	+	0	0	.
chr17	62852854	62852855	chr17:62852855:T:C	rs8081770	T	C	T	Hoxd9_MA0913.1	9	1	+	9.209394307523764	8.371167929409406	GTAATAAAAT
chr17	62859242	62859243	chr17:62859243:T:G	rs1363824126	T	G	T	Hoxd9_MA0913.1	6	1	-	7.931939052009941	3.4573621893417363	ACCATAAAAA
chr17	62955873	62955874	chr17:62955874:A:G	rs74451022	A	G	A	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr17	63078809	63078810	chr17:63078810:A:G	rs148264971	A	G	A	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr17	63379855	63379856	chr17:63379856:G:C	rs8065950	G	C	C	Hoxd9_MA0913.1	29	0	+	0	0	.
chr17	63498275	63498276	chr17:63498276:A:G	rs1055086	A	G	G	Hoxd9_MA0913.1	17	0	-	0	0	.
chr17	63555799	63555800	chr17:63555800:T:A	rs776677889	T	A	T	Hoxd9_MA0913.1	13	0	-	0	0	.
chr17	64085043	64085044	chr17:64085044:A:G	rs2088033	A	G	g	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr17	64147699	64147700	chr17:64147700:T:C	rs183805918	T	C	T	Hoxd9_MA0913.1	9	1	-	7.890768629900132	6.424275289130639	ACCATTAAAA
chr17	64161645	64161646	chr17:64161646:G:T	rs28488856	G	T	G	Hoxd9_MA0913.1	22	0	-	0	0	.
chr17	64230946	64230947	chr17:64230947:T:C	rs117646490	T	C	T	Hoxd9_MA0913.1	17	0	+	0	0	.
chr17	64300237	64300238	chr17:64300238:A:G	rs782387581	A	G	A	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr17	64321358	64321359	chr17:64321359:G:A	rs71377739	G	A	G	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr17	64334095	64334096	chr17:64334096:G:A	rs12452419	G	A	g	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr17	64334097	64334098	chr17:64334098:A:C	rs56774006	A	C	a	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr17	64483155	64483156	chr17:64483156:A:C	rs17650301	A	C	A	Hoxd9_MA0913.1	6	1	+	8.531537147691377	4.056960285023171	GTCATAAAAA
chr17	64547170	64547171	chr17:64547171:C:T	rs144932577	C	T	C	Hoxd9_MA0913.1	19	0	+	0	0	.
chr17	64635693	64635694	chr17:64635694:T:C	rs188126319	T	C	T	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr17	64679694	64679695	chr17:64679695:A:G	rs762922966	A	G	A	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr17	64974496	64974497	chr17:64974497:G:A	rs9902649	G	A	g	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr17	64976258	64976259	chr17:64976259:A:C	rs11650284	A	C	C	Hoxd9_MA0913.1	4	1	-	9.801341972390743	6.509207720615763	GCAATAAAAA
chr17	64976262	64976263	chr17:64976263:C:T	rs11650325	C	T	C	Hoxd9_MA0913.1	0	1	-	9.801341972390743	8.853608248980283	GCAATAAAAA
chr17	64987026	64987027	chr17:64987027:T:G	rs4791250	T	G	T	Hoxd9_MA0913.1	23	0	+	0	0	.
chr17	65079364	65079365	chr17:65079365:T:C	rs1530350	T	C	C	Hoxd9_MA0913.1	12	0	-	0	0	.
chr17	65100381	65100382	chr17:65100382:G:T	rs149280629	G	T	G	Hoxd9_MA0913.1	18	0	-	0	0	.
chr17	65100407	65100408	chr17:65100408:G:T	rs62062507	G	T	G	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr17	65164676	65164677	chr17:65164677:G:T	rs60814564	G	T	G	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr17	65180997	65180998	chr17:65180998:A:G	rs7211506	A	G	G	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr17	65193698	65193699	chr17:65193699:G:A	rs2056050	G	A	G	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr17	65261899	65261900	chr17:65261900:A:G	rs4790952	A	G	G	Hoxd9_MA0913.1	26	0	+	0	0	.
chr17	65297520	65297521	chr17:65297521:G:C	rs8081577	G	C	C	Hoxd9_MA0913.1	12	0	-	0	0	.
chr17	65341689	65341690	chr17:65341690:G:A	rs116573095	G	A	G	Hoxd9_MA0913.1	23	0	+	0	0	.
chr17	65556887	65556888	chr17:65556888:C:G	rs62063458	C	G	C	Hoxd9_MA0913.1	16	0	+	0	0	.
chr17	65564034	65564035	chr17:65564035:A:G	rs11867847	A	G	A	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr17	65628486	65628487	chr17:65628487:C:T	rs8081284	C	T	C	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr17	65679340	65679341	chr17:65679341:T:A	rs232102	T	A	A	Hoxd9_MA0913.1	4	1	+	8.329997507299597	5.6427460831134395	GTAATTAAAC
chr17	65805474	65805475	chr17:65805475:G:C	rs17695630	G	C	G	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr17	66003427	66003428	chr17:66003428:G:A	rs12946943	G	A	G	Hoxd9_MA0913.1	21	0	-	0	0	.
chr17	66086317	66086318	chr17:66086318:C:T	rs111670706	C	T	C	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr17	66189988	66189989	chr17:66189989:A:G	rs149303243	A	G	G	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr17	66273544	66273545	chr17:66273545:A:G	rs7219681	A	G	G	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr17	66283102	66283103	chr17:66283103:C:T	rs34857989	C	T	C	Hoxd9_MA0913.1	23	0	+	0	0	.
chr17	66381746	66381747	chr17:66381747:G:A	rs79939256	G	A	G	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr17	66414445	66414446	chr17:66414446:C:T	rs9972974	C	T	C	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr17	66584819	66584820	chr17:66584820:T:C	rs2361490	T	C	C	Hoxd9_MA0913.1	24	0	-	0	0	.
chr17	66593174	66593175	chr17:66593175:T:C	rs8080445	T	C	t	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr17	66593175	66593176	chr17:66593176:G:T	rs8079604	G	T	g	Hoxd9_MA0913.1	0	1	+	7.880237767203775	4.8430950712509055	GTAATAAAGA
chr17	66757189	66757190	chr17:66757190:G:A	rs4261586	G	A	A	Hoxd9_MA0913.1	3	1	+	7.973723031895638	9.801341972390743	GCAGTAAAAA
chr17	66855525	66855526	chr17:66855526:A:G	rs117845626	A	G	A	Hoxd9_MA0913.1	23	0	+	0	0	.
chr17	67068791	67068792	chr17:67068792:A:G	rs7209433	A	G	G	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr17	67136974	67136975	chr17:67136975:T:A	rs79279536	T	A	T	Hoxd9_MA0913.1	12	0	+	0	0	.
chr17	67336611	67336612	chr17:67336612:A:T	rs11658373	A	T	a	Hoxd9_MA0913.1	12	0	+	0	0	.
chr17	67423048	67423049	chr17:67423049:A:G	rs73996711	A	G	A	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr17	67475620	67475621	chr17:67475621:C:T	rs758738690	C	T	C	Hoxd9_MA0913.1	20	0	-	0	0	.
chr17	67551325	67551326	chr17:67551326:G:A	rs8079845	G	A	G	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr17	67592868	67592869	chr17:67592869:T:C	rs2570052	T	C	T	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr17	68035082	68035083	chr17:68035083:T:C	rs75236169	T	C	C	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr17	68036551	68036552	chr17:68036552:T:C	rs144726285	T	C	T	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr17	68229508	68229509	chr17:68229509:G:C	rs59956579	G	C	G	Hoxd9_MA0913.1	20	0	-	0	0	.
chr17	68234606	68234607	chr17:68234607:C:G	rs55801252	C	G	C	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr17	68351757	68351758	chr17:68351758:A:G	rs76945033	A	G	A	Hoxd9_MA0913.1	3	1	+	8.079199333223738	6.251580392728633	GCAATAAATT
chr17	68388401	68388402	chr17:68388402:C:T	rs76248943	C	T	C	Hoxd9_MA0913.1	10	0	+	0	0	.
chr17	68388402	68388403	chr17:68388403:G:T	rs72841846	G	T	G	Hoxd9_MA0913.1	11	0	+	0	0	.
chr17	68388412	68388413	chr17:68388413:A:T	rs1007041	A	T	A	Hoxd9_MA0913.1	21	0	+	0	0	.
chr17	68414181	68414182	chr17:68414182:G:A	rs144541627	G	A	G	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr17	68444372	68444373	chr17:68444373:T:C	rs1030098	T	C	T	Hoxd9_MA0913.1	29	0	+	0	0	.
chr17	68513557	68513558	chr17:68513558:A:G	rs143346228	A	G	A	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr17	68513560	68513561	chr17:68513561:C:T	rs72847784	C	T	C	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr17	68640827	68640828	chr17:68640828:G:A	rs2109078	G	A	G	Hoxd9_MA0913.1	0	1	+	7.932552609785828	6.984818886375368	GCAGTTAAAA
chr17	68692460	68692461	chr17:68692461:G:A	rs9907696	G	A	A	Hoxd9_MA0913.1	27	0	-	0	0	.
chr17	68812829	68812830	chr17:68812830:A:G	rs7211958	A	G	G	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr17	69189839	69189840	chr17:69189840:G:C	rs2364990	G	C	G	Hoxd9_MA0913.1	10	0	-	0	0	.
chr17	69535093	69535094	chr17:69535094:C:T	rs756944	C	T	C	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr17	69957365	69957366	chr17:69957366:A:G	rs11653491	A	G	A	Hoxd9_MA0913.1	12	0	-	0	0	.
chr17	70243350	70243351	chr17:70243351:T:C	rs112313895	T	C	C	Hoxd9_MA0913.1	26	0	-	0	0	.
chr17	70405976	70405977	chr17:70405977:C:T	rs376713134	C	T	C	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr17	70407891	70407892	chr17:70407892:G:A	rs62070144	G	A	G	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr17	70869715	70869716	chr17:70869716:A:G	rs16976310	A	G	G	Hoxd9_MA0913.1	18	0	-	0	0	.
chr17	71149662	71149663	chr17:71149663:G:T	rs28703253	G	T	T	Hoxd9_MA0913.1	15	0	+	0	0	.
chr17	71176328	71176329	chr17:71176329:T:C	rs9893839	T	C	C	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr17	71183216	71183217	chr17:71183217:C:T	rs73417929	C	T	C	Hoxd9_MA0913.1	21	0	+	0	0	.
chr17	71276153	71276154	chr17:71276154:G:A	rs1041960935	G	A	G	Hoxd9_MA0913.1	0	1	+	8.678133135028622	7.73039941161816	GCAATTAAAC
chr17	71397274	71397275	chr17:71397275:T:C	rs11654061	T	C	T	Hoxd9_MA0913.1	15	0	+	0	0	.
chr17	71440367	71440368	chr17:71440368:G:C	rs11651604	G	C	G	Hoxd9_MA0913.1	11	0	+	0	0	.
chr17	71446541	71446542	chr17:71446542:G:A	rs756501	G	A	A	Hoxd9_MA0913.1	2	1	-	8.879672775420401	3.3509979405399606	GCCATAAAAA
chr17	71470176	71470177	chr17:71470177:T:C	rs2159041	T	C	T	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr17	71497793	71497794	chr17:71497794:C:G	rs6501492	C	G	C	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr17	71530502	71530503	chr17:71530503:A:G	rs77447012	A	G	A	Hoxd9_MA0913.1	2	1	+	7.984561357794846	6.307102916336748	GCAATAAAGT
chr17	71633528	71633529	chr17:71633529:G:T	chr17:71633529:G:T	G	T	G	Hoxd9_MA0913.1	18	0	+	0	0	.
chr17	71657375	71657376	chr17:71657376:C:T	rs113121672	C	T	C	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr17	71665844	71665845	chr17:71665845:C:T	chr17:71665845:C:T	C	T	C	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr17	71966351	71966352	chr17:71966352:A:G	rs543332401	A	G	A	Hoxd9_MA0913.1	6	1	+	9.412035922551908	2.5966152547725674	GTAATTAAAA
chr17	72177627	72177628	chr17:72177628:C:T	rs72850157	C	T	C	Hoxd9_MA0913.1	18	0	-	0	0	.
chr17	72379024	72379025	chr17:72379025:G:T	rs77363165	G	T	G	Hoxd9_MA0913.1	20	0	+	0	0	.
chr17	72392398	72392399	chr17:72392399:C:T	rs575833627	C	T	C	Hoxd9_MA0913.1	18	0	-	0	0	.
chr17	72623207	72623208	chr17:72623208:G:A	rs116956401	G	A	G	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr17	72626188	72626189	chr17:72626189:T:C	rs74974166	T	C	T	Hoxd9_MA0913.1	24	0	+	0	0	.
chr17	72663363	72663364	chr17:72663364:T:G	rs4793471	T	G	G	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr17	72683671	72683672	chr17:72683672:C:T	rs11077628	C	T	C	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr17	72728035	72728036	chr17:72728036:A:G	rs78522727	A	G	A	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr17	72764231	72764232	chr17:72764232:G:A	rs57266831	G	A	G	Hoxd9_MA0913.1	2	1	-	7.265533775852649	1.7368589409722084	GCCATTAAGA
chr17	72950589	72950590	chr17:72950590:T:A	rs8073848	T	A	T	Hoxd9_MA0913.1	23	0	+	0	0	.
chr17	73059893	73059894	chr17:73059894:C:T	rs62073132	C	T	C	Hoxd9_MA0913.1	29	0	-	0	0	.
chr17	73070696	73070697	chr17:73070697:G:T	rs111867318	G	T	G	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr17	73108008	73108009	chr17:73108009:G:A	rs143738247	G	A	G	Hoxd9_MA0913.1	26	0	+	0	0	.
chr17	73311007	73311008	chr17:73311008:A:C	rs1051112151	A	C	A	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr17	73346671	73346672	chr17:73346672:C:T	rs12947464	C	T	C	Hoxd9_MA0913.1	14	0	-	0	0	.
chr17	73424608	73424609	chr17:73424609:C:T	rs11870884	C	T	C	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr17	73447556	73447557	chr17:73447557:C:T	rs7224502	C	T	C	Hoxd9_MA0913.1	20	0	-	0	0	.
chr17	73598896	73598897	chr17:73598897:T:C	rs78080692	T	C	T	Hoxd9_MA0913.1	13	0	+	0	0	.
chr17	73640668	73640669	chr17:73640669:T:C	rs4789237	T	C	C	Hoxd9_MA0913.1	26	0	+	0	0	.
chr17	73657991	73657992	chr17:73657992:C:G	rs148281525	C	G	C	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr17	73705722	73705723	chr17:73705723:T:C	rs2619994	T	C	C	Hoxd9_MA0913.1	20	0	-	0	0	.
chr17	73707052	73707053	chr17:73707053:C:T	rs4789352	C	T	C	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr17	73812782	73812783	chr17:73812783:A:G	rs72844266	A	G	A	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr17	73822654	73822655	chr17:73822655:C:T	rs16977794	C	T	C	Hoxd9_MA0913.1	26	0	-	0	0	.
chr17	73901619	73901620	chr17:73901620:T:C	rs4789591	T	C	C	Hoxd9_MA0913.1	3	1	-	7.7976343601680895	5.970015419672985	GCCATAAAAC
chr17	74271380	74271381	chr17:74271381:T:C	rs4789050	T	C	T	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr17	74281549	74281550	chr17:74281550:G:A	rs62065702	G	A	G	Hoxd9_MA0913.1	21	0	-	0	0	.
chr17	74295589	74295590	chr17:74295590:T:G	rs72848283	T	G	T	Hoxd9_MA0913.1	2	1	-	8.32301137036169	7.401342173391351	GCAATAAATA
chr17	74386777	74386778	chr17:74386778:C:A	rs16978020	C	A	C	Hoxd9_MA0913.1	0	1	-	7.839067345093966	4.801924649141096	GTAATTAAGA
chr17	74565533	74565534	chr17:74565534:A:G	rs905711	A	G	G	Hoxd9_MA0913.1	10	0	-	0	0	.
chr17	74604844	74604845	chr17:74604845:T:C	rs477803	T	C	C	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr17	75021262	75021263	chr17:75021263:T:C	rs16967525	T	C	T	Hoxd9_MA0913.1	21	0	+	0	0	.
chr17	75035056	75035057	chr17:75035057:G:C	rs148808947	G	C	G	Hoxd9_MA0913.1	17	0	-	0	0	.
chr17	75035057	75035058	chr17:75035058:C:T	rs114651322	C	T	C	Hoxd9_MA0913.1	16	0	-	0	0	.
chr17	75035067	75035068	chr17:75035068:T:A	rs545158057	T	A	T	Hoxd9_MA0913.1	6	1	-	7.75646393805828	5.333143990524294	GCCATTAAAC
chr17	75087653	75087654	chr17:75087654:G:A	rs114846892	G	A	G	Hoxd9_MA0913.1	21	0	-	0	0	.
chr17	75087674	75087675	chr17:75087675:C:T	rs886855060	C	T	C	Hoxd9_MA0913.1	0	1	-	7.306704197962459	6.358970474551999	GCCATAAAGA
chr17	75152457	75152458	chr17:75152458:G:A	rs1000299	G	A	G	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr17	75160542	75160543	chr17:75160543:C:G	rs117450381	C	G	C	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr17	75249938	75249939	chr17:75249939:C:A	rs1471454	C	A	C	Hoxd9_MA0913.1	21	0	-	0	0	.
chr17	75320143	75320144	chr17:75320144:T:C	rs139933285	T	C	T	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr17	76049142	76049143	chr17:76049143:C:A	rs2598434	C	A	C	Hoxd9_MA0913.1	21	0	-	0	0	.
chr17	76165451	76165452	chr17:76165452:C:T	rs16968642	C	T	T	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr17	76218470	76218471	chr17:76218471:T:C	rs9911570	T	C	T	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr17	76452172	76452173	chr17:76452173:G:A	rs56248611	G	A	G	Hoxd9_MA0913.1	11	0	+	0	0	.
chr17	76588976	76588977	chr17:76588977:T:C	rs4383173	T	C	T	Hoxd9_MA0913.1	3	1	-	7.880237767203775	6.052618826708672	GTAATAAAGA
chr17	76588979	76588980	chr17:76588980:C:T	rs11658384	C	T	C	Hoxd9_MA0913.1	0	1	-	7.880237767203775	6.932504043793315	GTAATAAAGA
chr17	76601703	76601704	chr17:76601704:G:A	rs188099360	G	A	G	Hoxd9_MA0913.1	28	0	-	0	0	.
chr17	76601730	76601731	chr17:76601731:G:T	rs181304434	G	T	G	Hoxd9_MA0913.1	1	1	-	7.931939052009941	5.512120675984683	ACCATAAAAA
chr17	76605842	76605843	chr17:76605843:T:C	rs2532440	T	C	T	Hoxd9_MA0913.1	9	1	-	7.880237767203775	6.413744426434284	GTAATAAAGA
chr17	76605856	76605857	chr17:76605857:G:T	rs2532439	G	T	G	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr17	76660155	76660156	chr17:76660156:A:G	rs16969187	A	G	A	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr17	76660202	76660203	chr17:76660203:G:T	rs1214685756	G	T	G	Hoxd9_MA0913.1	28	0	+	0	0	.
chr17	76670935	76670936	chr17:76670936:A:T	rs75539366	A	T	A	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr17	76716530	76716531	chr17:76716531:A:G	rs977787179	A	G	A	Hoxd9_MA0913.1	11	0	+	0	0	.
chr17	76716546	76716547	chr17:76716547:T:A	rs60257128	T	A	T	Hoxd9_MA0913.1	27	0	+	0	0	.
chr17	76738559	76738560	chr17:76738560:T:C	rs62086784	T	C	T	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr17	76848548	76848549	chr17:76848549:A:C	rs57189699	A	C	A	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr17	76882526	76882527	chr17:76882527:A:G	rs547205	A	G	G	Hoxd9_MA0913.1	14	0	-	0	0	.
chr17	76917126	76917127	chr17:76917127:G:A	rs12452891	G	A	G	Hoxd9_MA0913.1	23	0	+	0	0	.
chr17	77049837	77049838	chr17:77049838:G:A	rs78565192	G	A	G	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr17	77147311	77147312	chr17:77147312:T:C	rs118147433	T	C	T	Hoxd9_MA0913.1	9	1	-	7.760507910628393	6.294014569858901	GCAATTAACA
chr17	77168803	77168804	chr17:77168804:A:G	rs11871056	A	G	G	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr17	77235576	77235577	chr17:77235577:C:A	rs73363487	C	A	C	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr17	77309796	77309797	chr17:77309797:T:C	rs67186777	T	C	C	Hoxd9_MA0913.1	4	1	+	8.371167929409406	5.079033677634427	GTAATAAAAC
chr17	77411654	77411655	chr17:77411655:C:T	rs144634028	C	T	C	Hoxd9_MA0913.1	29	0	-	0	0	.
chr17	77411687	77411688	chr17:77411688:G:A	rs73373398	G	A	G	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr17	77477489	77477490	chr17:77477490:T:C	chr17:77477490:T:C	T	C	T	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr17	77524541	77524542	chr17:77524542:C:T	rs11656914	C	T	C	Hoxd9_MA0913.1	10	0	-	0	0	.
chr17	77543036	77543037	chr17:77543037:G:A	rs557051995	G	A	G	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr17	77543688	77543689	chr17:77543689:T:C	rs11077912	T	C	C	Hoxd9_MA0913.1	12	0	+	0	0	.
chr17	77610858	77610859	chr17:77610859:G:A	rs189127154	G	A	G	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr17	77620603	77620604	chr17:77620604:C:T	rs9911541	C	T	C	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr17	77842825	77842826	chr17:77842826:A:G	rs527550148	A	G	A	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr17	77887642	77887643	chr17:77887643:C:T	rs62078510	C	T	C	Hoxd9_MA0913.1	20	0	+	0	0	.
chr17	77887648	77887649	chr17:77887649:G:A	rs9890194	G	A	A	Hoxd9_MA0913.1	26	0	+	0	0	.
chr17	77913156	77913157	chr17:77913157:C:T	rs534849010	C	T	c	Hoxd9_MA0913.1	25	0	+	0	0	.
chr17	77963632	77963633	chr17:77963633:T:C	chr17:77963633:T:C	T	C	T	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr17	78041496	78041497	chr17:78041497:A:T	rs551126098	A	T	A	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr17	78044445	78044446	chr17:78044446:T:C	rs74667773	T	C	C	Hoxd9_MA0913.1	25	0	+	0	0	.
chr17	78044448	78044449	chr17:78044449:G:C	rs77307352	G	C	C	Hoxd9_MA0913.1	28	0	+	0	0	.
chr17	78197090	78197091	chr17:78197091:A:C	rs76913674	A	C	a	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr17	78376316	78376317	chr17:78376317:A:G	rs34337072	A	G	A	Hoxd9_MA0913.1	28	0	+	0	0	.
chr17	78575477	78575478	chr17:78575478:T:C	rs1562102	T	C	t	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr17	78575496	78575497	chr17:78575497:G:T	rs9904706	G	T	G	Hoxd9_MA0913.1	12	0	+	0	0	.
chr17	78717715	78717716	chr17:78717716:C:T	rs552386888	C	T	T	Hoxd9_MA0913.1	14	0	+	0	0	.
chr17	78735837	78735838	chr17:78735838:C:T	rs8070990	C	T	T	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr17	78862776	78862777	chr17:78862777:T:C	rs114372764	T	C	T	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr17	78883033	78883034	chr17:78883034:C:T	rs72851216	C	T	T	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr17	78971265	78971266	chr17:78971266:A:G	rs117771294	A	G	A	Hoxd9_MA0913.1	15	0	-	0	0	.
chr17	79012070	79012071	chr17:79012071:C:T	rs113990000	C	T	C	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr17	79143944	79143945	chr17:79143945:C:A	rs34789059	C	A	C	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr17	79305736	79305737	chr17:79305737:C:A	rs372962035	C	A	C	Hoxd9_MA0913.1	26	0	-	0	0	.
chr17	79486346	79486347	chr17:79486347:C:T	rs35746290	C	T	T	Hoxd9_MA0913.1	16	0	-	0	0	.
chr17	79698410	79698411	chr17:79698411:G:A	rs111797104	G	A	G	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr17	79779110	79779111	chr17:79779111:T:C	rs115217657	T	C	T	Hoxd9_MA0913.1	22	0	-	0	0	.
chr17	79922067	79922068	chr17:79922068:G:C	rs2120453	G	C	G	Hoxd9_MA0913.1	29	0	-	0	0	.
chr17	79922115	79922116	chr17:79922116:A:G	rs2034126	A	G	A	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr17	79940312	79940313	chr17:79940313:G:A	rs3751947	G	A	G	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr17	79950725	79950726	chr17:79950726:T:G	rs73423907	T	G	T	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr17	79974601	79974602	chr17:79974602:G:T	rs1106645	G	T	G	Hoxd9_MA0913.1	28	0	-	0	0	.
chr17	79977887	79977888	chr17:79977888:G:T	rs1371919606	G	T	G	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr17	80047237	80047238	chr17:80047238:A:G	rs7207441	A	G	A	Hoxd9_MA0913.1	3	1	+	7.105164557570679	5.277545617075575	GCAATTAAGC
chr17	80255160	80255161	chr17:80255161:C:T	rs73432185	C	T	C	Hoxd9_MA0913.1	26	0	+	0	0	.
chr17	80262401	80262402	chr17:80262402:A:G	rs138105446	A	G	A	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr17	80575436	80575437	chr17:80575437:A:G	rs76584516	A	G	A	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr17	80641770	80641771	chr17:80641771:G:A	rs12940622	G	A	A	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr17	80646262	80646263	chr17:80646263:A:G	rs62068358	A	G	A	Hoxd9_MA0913.1	29	0	+	0	0	.
chr17	80702746	80702747	chr17:80702747:T:C	rs9894978	T	C	C	Hoxd9_MA0913.1	19	0	-	0	0	.
chr17	80740992	80740993	chr17:80740993:C:T	rs12947784	C	T	C	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr17	80815703	80815704	chr17:80815704:T:G	rs894634862	T	G	T	Hoxd9_MA0913.1	1	1	+	7.986713003892226	5.242283619336538	GTAATAAAAG
chr17	80900366	80900367	chr17:80900367:T:C	rs7208146	T	C	C	Hoxd9_MA0913.1	19	0	-	0	0	.
chr17	81002794	81002795	chr17:81002795:T:C	rs8078438	T	C	C	Hoxd9_MA0913.1	29	0	+	0	0	.
chr17	81251824	81251825	chr17:81251825:A:T	rs139633771	A	T	A	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr17	81251857	81251858	chr17:81251858:C:T	rs118099334	C	T	C	Hoxd9_MA0913.1	18	0	+	0	0	.
chr17	81267720	81267721	chr17:81267721:A:G	rs7223939	A	G	A	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr17	81310333	81310334	chr17:81310334:G:T	rs56207672	G	T	G	Hoxd9_MA0913.1	0	1	+	7.945542581782417	4.908399885829547	GTAATTAAAG
chr17	81310916	81310917	chr17:81310917:A:C	rs540234386	A	C	A	Hoxd9_MA0913.1	2	1	+	8.079199333223738	7.1575301362533965	GCAATAAATT
chr17	81310937	81310938	chr17:81310938:A:G	rs7208247	A	G	A	Hoxd9_MA0913.1	23	0	+	0	0	.
chr17	81402971	81402972	chr17:81402972:G:A	rs1045736084	G	A	G	Hoxd9_MA0913.1	16	0	+	0	0	.
chr17	81459729	81459730	chr17:81459730:C:T	rs11652589	C	T	c	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr17	81584057	81584058	chr17:81584058:C:T	rs1025486545	C	T	A	Hoxd9_MA0913.1	11	0	-	0	0	.
chr17	81584519	81584520	chr17:81584520:T:C	rs79459378	T	C	T	Hoxd9_MA0913.1	4	1	+	8.812437826870472	5.520303575095493	ACAATTAAAA
chr17	81593035	81593036	chr17:81593036:T:A	rs7406829	T	A	A	Hoxd9_MA0913.1	1	1	+	8.490366725581566	6.418683977285333	GTCATTAAAA
chr17	81610100	81610101	chr17:81610101:T:G	rs8077038	T	G	T	Hoxd9_MA0913.1	21	0	+	0	0	.
chr17	81867959	81867960	chr17:81867960:C:T	chr17:81867960:C:T	C	T	C	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr17	81867960	81867961	chr17:81867961:G:A	rs36092850	G	A	G	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr17	82121080	82121081	chr17:82121081:C:T	rs62080003	C	T	C	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr17	82178889	82178890	chr17:82178890:T:C	rs118126101	T	C	T	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr17	82345157	82345158	chr17:82345158:G:A	rs4261599	G	A	G	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr17	82367838	82367839	chr17:82367839:G:C	rs147179153	G	C	G	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr17	82640300	82640301	chr17:82640301:A:C	rs11655850	A	C	A	Hoxd9_MA0913.1	3	1	+	8.812437826870472	4.346207156470417	ACAATTAAAA
chr17	82881338	82881339	chr17:82881339:A:G	rs8072584	A	G	A	Hoxd9_MA0913.1	11	0	+	0	0	.
chr17	82926370	82926371	chr17:82926371:T:C	rs1078334	T	C	T	Hoxd9_MA0913.1	21	0	-	0	0	.
chr17	83083879	83083880	chr17:83083880:C:T	rs144692363	C	T	t	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr17	83083883	83083884	chr17:83083884:A:G	rs56848030	A	G	a	Hoxd9_MA0913.1	3	1	+	8.371167929409406	6.543548988914303	GTAATAAAAC
chr17	83106372	83106373	chr17:83106373:G:A	rs28626243	G	A	G	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr17	83199203	83199204	chr17:83199204:T:C	rs376919389	T	C	c	Hoxd9_MA0913.1	3	1	-	8.293678209511443	6.466059269016337	GCAATTAAAG
chr18	158010	158011	chr18:158011:C:T	rs115488861	C	T	C	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr18	258808	258809	chr18:258809:T:C	rs484168	T	C	T	Hoxd9_MA0913.1	11	0	+	0	0	.
chr18	276539	276540	chr18:276540:T:C	rs72856291	T	C	T	Hoxd9_MA0913.1	24	0	+	0	0	.
chr18	298219	298220	chr18:298220:T:C	rs73366346	T	C	T	Hoxd9_MA0913.1	21	0	-	0	0	.
chr18	298552	298553	chr18:298553:G:C	rs4121514	G	C	G	Hoxd9_MA0913.1	0	1	+	8.287725110553424	6.809726442170165	GTCATAAAAT
chr18	312643	312644	chr18:312644:C:T	rs541092	C	T	C	Hoxd9_MA0913.1	10	0	+	0	0	.
chr18	384970	384971	chr18:384971:C:G	rs4542729	C	G	G	Hoxd9_MA0913.1	9	1	+	8.719303557138431	8.334848631621252	GCAATAAAAC
chr18	421523	421524	chr18:421524:A:G	rs2846650	A	G	G	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr18	676007	676008	chr18:676008:G:C	rs495139	G	C	C	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr18	832482	832483	chr18:832483:G:C	rs9958927	G	C	C	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr18	832519	832520	chr18:832520:C:A	rs9945096	C	A	A	Hoxd9_MA0913.1	29	0	+	0	0	.
chr18	1648545	1648546	chr18:1648546:A:T	rs144490186	A	T	A	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr18	1907552	1907553	chr18:1907553:T:C	rs34732956	T	C	T	Hoxd9_MA0913.1	3	1	-	9.209394307523764	7.381775367028661	GTAATAAAAT
chr18	1965689	1965690	chr18:1965690:C:T	rs73377716	C	T	C	Hoxd9_MA0913.1	13	0	+	0	0	.
chr18	2486211	2486212	chr18:2486212:C:T	rs2347268	C	T	T	Hoxd9_MA0913.1	15	0	+	0	0	.
chr18	2795657	2795658	chr18:2795658:C:T	rs2298497	C	T	T	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr18	2839125	2839126	chr18:2839126:C:T	rs60345718	C	T	C	Hoxd9_MA0913.1	23	0	-	0	0	.
chr18	2848630	2848631	chr18:2848631:C:G	rs644288	C	G	G	Hoxd9_MA0913.1	11	0	+	0	0	.
chr18	2848638	2848639	chr18:2848639:G:A	rs115567374	G	A	G	Hoxd9_MA0913.1	19	0	+	0	0	.
chr18	2899185	2899186	chr18:2899186:A:G	rs12150778	A	G	A	Hoxd9_MA0913.1	21	0	+	0	0	.
chr18	2912757	2912758	chr18:2912758:C:A	rs3745016	C	A	A	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr18	3013774	3013775	chr18:3013775:C:G	rs8087375	C	G	G	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr18	3192761	3192762	chr18:3192762:C:T	rs4798072	C	T	T	Hoxd9_MA0913.1	1	1	+	8.2283733949328	7.880237767203775	GCAATAAAGA
chr18	3261938	3261939	chr18:3261939:C:A	rs113350965	C	A	C	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr18	3625172	3625173	chr18:3625173:T:C	rs985054252	T	C	T	Hoxd9_MA0913.1	4	1	+	8.246554688443613	4.9544204366686335	GTCATTAAAT
chr18	3625179	3625180	chr18:3625180:C:T	rs550861697	C	T	C	Hoxd9_MA0913.1	11	0	+	0	0	.
chr18	3855905	3855906	chr18:3855906:T:C	rs73374526	T	C	C	Hoxd9_MA0913.1	29	0	-	0	0	.
chr18	3867357	3867358	chr18:3867358:A:G	rs3898003	A	G	A	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr18	4023395	4023396	chr18:4023396:T:C	rs16945891	T	C	T	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr18	4179844	4179845	chr18:4179845:C:A	rs6506192	C	A	A	Hoxd9_MA0913.1	18	0	+	0	0	.
chr18	4907350	4907351	chr18:4907351:T:C	rs150166393	T	C	C	Hoxd9_MA0913.1	28	0	-	0	0	.
chr18	5059381	5059382	chr18:5059382:A:G	rs928570850	A	G	A	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr18	5311822	5311823	chr18:5311823:A:C	rs73946229	A	C	A	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr18	5395878	5395879	chr18:5395879:G:A	rs73375705	G	A	A	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr18	5453156	5453157	chr18:5453157:A:G	rs113022020	A	G	A	Hoxd9_MA0913.1	3	1	+	8.60979621184233	6.782177271347225	ACAATAAAAT
chr18	5539738	5539739	chr18:5539739:C:T	rs1719971	C	T	T	Hoxd9_MA0913.1	0	1	-	7.984561357794846	7.0368276343843865	GCAATAAAGT
chr18	5772047	5772048	chr18:5772048:G:A	rs1917929	G	A	G	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr18	5840810	5840811	chr18:5840811:G:A	rs72855836	G	A	G	Hoxd9_MA0913.1	20	0	-	0	0	.
chr18	5868345	5868346	chr18:5868346:C:T	rs74554376	C	T	T	Hoxd9_MA0913.1	9	1	+	8.371167929409406	9.209394307523764	GTAATAAAAC
chr18	5956145	5956146	chr18:5956146:T:C	rs3737352	T	C	T	Hoxd9_MA0913.1	27	0	-	0	0	.
chr18	6055672	6055673	chr18:6055673:C:T	rs588339	C	T	T	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr18	6540640	6540641	chr18:6540641:T:C	rs7504986	T	C	T	Hoxd9_MA0913.1	27	0	-	0	0	.
chr18	6542741	6542742	chr18:6542742:A:G	rs12967054	A	G	A	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr18	6623592	6623593	chr18:6623593:T:A	rs73393308	T	A	A	Hoxd9_MA0913.1	25	0	-	0	0	.
chr18	6625790	6625791	chr18:6625791:T:C	rs62081423	T	C	t	Hoxd9_MA0913.1	3	1	-	8.879672775420401	7.052053834925298	GCCATAAAAA
chr18	6879036	6879037	chr18:6879037:T:A	rs609843	T	A	A	Hoxd9_MA0913.1	3	1	-	8.293678209511443	4.679338340382457	GCAATTAAAG
chr18	7000751	7000752	chr18:7000752:A:C	rs55972290	A	C	A	Hoxd9_MA0913.1	28	0	+	0	0	.
chr18	7507018	7507019	chr18:7507019:A:C	rs113245013	A	C	A	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr18	7730080	7730081	chr18:7730081:T:C	rs564408438	T	C	T	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr18	7790662	7790663	chr18:7790663:C:G	rs117002694	C	G	C	Hoxd9_MA0913.1	9	1	+	8.719303557138431	8.334848631621252	GCAATAAAAC
chr18	7872921	7872922	chr18:7872922:A:G	rs16952603	A	G	A	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr18	7958807	7958808	chr18:7958808:G:A	rs117022450	G	A	G	Hoxd9_MA0913.1	16	0	-	0	0	.
chr18	8290708	8290709	chr18:8290709:T:A	rs78874972	T	A	T	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr18	8479854	8479855	chr18:8479855:T:C	rs10502371	T	C	T	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr18	8627880	8627881	chr18:8627881:G:A	rs12454972	G	A	A	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr18	8700783	8700784	chr18:8700784:G:C	rs1861951	G	C	G	Hoxd9_MA0913.1	13	0	-	0	0	.
chr18	8700785	8700786	chr18:8700786:G:A	rs12326848	G	A	G	Hoxd9_MA0913.1	11	0	-	0	0	.
chr18	8794817	8794818	chr18:8794818:T:G	rs76804131	T	G	T	Hoxd9_MA0913.1	8	1	-	9.412035922551908	7.4123722828993674	GTAATTAAAA
chr18	8890196	8890197	chr18:8890197:A:G	rs611054	A	G	A	Hoxd9_MA0913.1	26	0	+	0	0	.
chr18	8945872	8945873	chr18:8945873:G:T	rs10163592	G	T	G	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr18	9096994	9096995	chr18:9096995:A:G	rs11872404	A	G	A	Hoxd9_MA0913.1	4	1	-	8.329997507299597	5.037863255524616	GTAATTAAAC
chr18	9107268	9107269	chr18:9107269:T:C	rs73388192	T	C	T	Hoxd9_MA0913.1	11	0	+	0	0	.
chr18	9321084	9321085	chr18:9321085:T:C	rs74974574	T	C	T	Hoxd9_MA0913.1	11	0	+	0	0	.
chr18	9441725	9441726	chr18:9441726:G:T	rs6506668	G	T	T	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr18	9446893	9446894	chr18:9446894:T:C	rs78859601	T	C	T	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr18	9450862	9450863	chr18:9450863:A:C	rs2864486	A	C	A	Hoxd9_MA0913.1	7	1	+	8.879672775420401	5.585826023701971	GCCATAAAAA
chr18	9615993	9615994	chr18:9615994:G:A	rs918006985	G	A	G	Hoxd9_MA0913.1	24	0	+	0	0	.
chr18	9760944	9760945	chr18:9760945:G:A	rs9304044	G	A	G	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr18	9874412	9874413	chr18:9874413:A:C	rs11081509	A	C	A	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr18	10024149	10024150	chr18:10024150:G:A	rs8092859	G	A	A	Hoxd9_MA0913.1	12	0	-	0	0	.
chr18	10085968	10085969	chr18:10085969:C:T	rs667048	C	T	C	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr18	10112898	10112899	chr18:10112899:C:G	rs522276	C	G	G	Hoxd9_MA0913.1	15	0	-	0	0	.
chr18	10121104	10121105	chr18:10121105:C:A	rs567479	C	A	A	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr18	10243283	10243284	chr18:10243284:G:C	rs8096474	G	C	G	Hoxd9_MA0913.1	27	0	-	0	0	.
chr18	10251210	10251211	chr18:10251211:C:T	rs116189597	C	T	C	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr18	10350407	10350408	chr18:10350408:C:A	rs8086034	C	A	A	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr18	10378230	10378231	chr18:10378231:G:A	rs206573	G	A	A	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr18	10689154	10689155	chr18:10689155:C:T	rs59222061	C	T	T	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr18	10727927	10727928	chr18:10727928:G:A	rs482103	G	A	G	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr18	10808970	10808971	chr18:10808971:A:T	rs1918673	A	T	A	Hoxd9_MA0913.1	17	0	-	0	0	.
chr18	10840625	10840626	chr18:10840626:G:C	rs62085163	G	C	G	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr18	10843343	10843344	chr18:10843344:T:C	rs1683377	T	C	T	Hoxd9_MA0913.1	16	0	+	0	0	.
chr18	10914548	10914549	chr18:10914549:C:A	rs9948005	C	A	c	Hoxd9_MA0913.1	27	0	-	0	0	.
chr18	11038212	11038213	chr18:11038213:A:C	rs1258808727	A	C	A	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr18	11075070	11075071	chr18:11075071:G:A	rs112211465	G	A	G	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr18	11245830	11245831	chr18:11245831:G:A	rs10468619	G	A	G	Hoxd9_MA0913.1	12	0	+	0	0	.
chr18	11291204	11291205	chr18:11291205:T:C	rs7244675	T	C	T	Hoxd9_MA0913.1	20	0	+	0	0	.
chr18	11817585	11817586	chr18:11817586:G:A	rs12454673	G	A	G	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr18	11850827	11850828	chr18:11850828:T:G	rs79875741	T	G	T	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr18	11850835	11850836	chr18:11850836:C:G	rs1352879842	C	G	C	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr18	11962418	11962419	chr18:11962419:C:A	rs79204434	C	A	C	Hoxd9_MA0913.1	21	0	+	0	0	.
chr18	11983680	11983681	chr18:11983681:C:T	rs644710	C	T	t	Hoxd9_MA0913.1	27	0	+	0	0	.
chr18	12039414	12039415	chr18:12039415:T:C	rs4797609	T	C	T	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr18	12039439	12039440	chr18:12039440:G:A	rs4797610	G	A	A	Hoxd9_MA0913.1	22	0	+	0	0	.
chr18	12349253	12349254	chr18:12349254:G:C	rs7235237	G	C	G	Hoxd9_MA0913.1	10	0	+	0	0	.
chr18	12382610	12382611	chr18:12382611:A:G	rs6416994	A	G	-	Hoxd9_MA0913.1	24	0	+	0	0	.
chr18	12598562	12598563	chr18:12598563:T:C	rs8095160	T	C	C	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr18	12728657	12728658	chr18:12728658:G:A	rs2542176	G	A	G	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr18	13313994	13313995	chr18:13313995:G:A	rs4797761	G	A	G	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr18	13399493	13399494	chr18:13399494:A:T	rs11080649	A	T	A	Hoxd9_MA0913.1	7	1	+	8.32301137036169	5.029164618643261	GCAATAAATA
chr18	13890014	13890015	chr18:13890015:C:T	rs28635426	C	T	C	Hoxd9_MA0913.1	24	0	-	0	0	.
chr18	14132940	14132941	chr18:14132941:G:A	rs56303599	G	A	N	Hoxd9_MA0913.1	25	0	+	0	0	.
chr18	14916786	14916787	chr18:14916787:G:A	rs785997	G	A	.	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr18	14934104	14934105	chr18:14934105:C:G	rs73417168	C	G	.	Hoxd9_MA0913.1	26	0	+	0	0	.
chr18	21112382	21112383	chr18:21112383:T:G	rs35996865	T	G	T	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr18	21112386	21112387	chr18:21112387:A:G	chr18:21112387:A:G	A	G	A	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr18	22505457	22505458	chr18:22505458:T:C	rs74985175	T	C	T	Hoxd9_MA0913.1	9	1	-	9.760171550280933	8.293678209511443	GCAATTAAAA
chr18	22934417	22934418	chr18:22934418:G:A	rs542232383	G	A	G	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr18	22978603	22978604	chr18:22978604:G:T	rs6507416	G	T	T	Hoxd9_MA0913.1	13	0	-	0	0	.
chr18	23006281	23006282	chr18:23006282:C:T	rs72889626	C	T	c	Hoxd9_MA0913.1	24	0	+	0	0	.
chr18	23068759	23068760	chr18:23068760:C:G	rs7233744	C	G	C	Hoxd9_MA0913.1	22	0	-	0	0	.
chr18	23141229	23141230	chr18:23141230:C:G	rs568976173	C	G	C	Hoxd9_MA0913.1	18	0	+	0	0	.
chr18	23394693	23394694	chr18:23394694:G:A	rs9955031	G	A	G	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr18	23486956	23486957	chr18:23486957:A:G	rs11663607	A	G	G	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr18	23499361	23499362	chr18:23499362:C:T	rs540732054	C	T	C	Hoxd9_MA0913.1	19	0	+	0	0	.
chr18	23626858	23626859	chr18:23626859:G:C	rs59371064	G	C	G	Hoxd9_MA0913.1	15	0	+	0	0	.
chr18	23812713	23812714	chr18:23812714:G:A	rs938602	G	A	A	Hoxd9_MA0913.1	10	0	+	0	0	.
chr18	23875594	23875595	chr18:23875595:A:G	rs11662907	A	G	G	Hoxd9_MA0913.1	5	1	+	7.984561357794846	1.7628982048989783	GCAATAAAGT
chr18	24079543	24079544	chr18:24079544:T:G	rs12957820	T	G	T	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr18	24096259	24096260	chr18:24096260:A:G	rs2120571	A	G	A	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr18	24268983	24268984	chr18:24268984:G:C	rs76888153	G	C	G	Hoxd9_MA0913.1	0	1	+	7.7976343601680895	6.319635691784832	GCCATAAAAC
chr18	24386367	24386368	chr18:24386368:C:T	rs8086269	C	T	T	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr18	24386403	24386404	chr18:24386404:C:T	rs8086289	C	T	T	Hoxd9_MA0913.1	28	0	+	0	0	.
chr18	24489155	24489156	chr18:24489156:T:C	rs79801104	T	C	T	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr18	24931080	24931081	chr18:24931081:C:T	rs17188214	C	T	C	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr18	24983873	24983874	chr18:24983874:G:A	rs73943904	G	A	G	Hoxd9_MA0913.1	23	0	-	0	0	.
chr18	25352742	25352743	chr18:25352743:A:C	chr18:25352743:A:C	A	C	A	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr18	25420751	25420752	chr18:25420752:T:C	rs12455530	T	C	T	Hoxd9_MA0913.1	25	0	-	0	0	.
chr18	26514216	26514217	chr18:26514217:T:C	rs12608091	T	C	T	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr18	26658226	26658227	chr18:26658227:C:A	rs117203015	C	A	C	Hoxd9_MA0913.1	17	0	-	0	0	.
chr18	26961209	26961210	chr18:26961210:G:A	rs193291550	G	A	G	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr18	27058150	27058151	chr18:27058151:G:A	rs1485807	G	A	G	Hoxd9_MA0913.1	14	0	-	0	0	.
chr18	27685982	27685983	chr18:27685983:T:C	rs143045061	T	C	T	Hoxd9_MA0913.1	2	1	-	8.323343304007485	6.645884862549387	CCAATAAAAA
chr18	27685985	27685986	chr18:27685986:G:T	rs6508498	G	T	T	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr18	27807972	27807973	chr18:27807973:A:G	rs56300506	A	G	A	Hoxd9_MA0913.1	28	0	+	0	0	.
chr18	28065438	28065439	chr18:28065439:A:G	rs1220029	A	G	A	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr18	28177288	28177289	chr18:28177289:G:A	rs568711091	G	A	G	Hoxd9_MA0913.1	25	0	+	0	0	.
chr18	28565692	28565693	chr18:28565693:G:T	rs16944922	G	T	T	Hoxd9_MA0913.1	16	0	+	0	0	.
chr18	28589071	28589072	chr18:28589072:G:A	rs11877894	G	A	G	Hoxd9_MA0913.1	19	0	-	0	0	.
chr18	28718817	28718818	chr18:28718818:T:A	rs9954774	T	A	A	Hoxd9_MA0913.1	17	0	+	0	0	.
chr18	28735755	28735756	chr18:28735756:A:T	rs57579993	A	T	A	Hoxd9_MA0913.1	14	0	+	0	0	.
chr18	28875371	28875372	chr18:28875372:C:T	rs7231267	C	T	C	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr18	29068478	29068479	chr18:29068479:A:C	rs16946079	A	C	A	Hoxd9_MA0913.1	9	1	-	9.209394307523764	7.986713003892226	GTAATAAAAT
chr18	29309702	29309703	chr18:29309703:T:A	rs16960815	T	A	T	Hoxd9_MA0913.1	4	1	+	8.60979621184233	5.9225447876561725	ACAATAAAAT
chr18	29871038	29871039	chr18:29871039:C:T	rs1440839	C	T	C	Hoxd9_MA0913.1	13	0	+	0	0	.
chr18	29881387	29881388	chr18:29881388:T:C	rs12458326	T	C	T	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr18	29928399	29928400	chr18:29928400:A:G	rs74485858	A	G	G	Hoxd9_MA0913.1	22	0	-	0	0	.
chr18	30342890	30342891	chr18:30342891:G:C	rs4617937	G	C	C	Hoxd9_MA0913.1	27	0	+	0	0	.
chr18	30440574	30440575	chr18:30440575:C:T	rs58106920	C	T	C	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr18	30573714	30573715	chr18:30573715:T:A	rs1478545	T	A	A	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr18	30859231	30859232	chr18:30859232:A:G	rs3910337	A	G	G	Hoxd9_MA0913.1	6	1	+	8.879672775420401	2.064252107641061	GCCATAAAAA
chr18	30859244	30859245	chr18:30859245:G:A	rs1435268	G	A	A	Hoxd9_MA0913.1	19	0	+	0	0	.
chr18	30933820	30933821	chr18:30933821:T:C	rs2420204	T	C	C	Hoxd9_MA0913.1	8	1	-	8.371167929409406	6.798199351951464	GTAATAAAAC
chr18	30991096	30991097	chr18:30991097:C:T	rs1051487	C	T	T	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr18	31184356	31184357	chr18:31184357:G:A	rs7243239	G	A	A	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr18	31387830	31387831	chr18:31387831:G:A	rs9951411	G	A	A	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr18	31657896	31657897	chr18:31657897:C:T	rs1449087	C	T	C	Hoxd9_MA0913.1	28	0	-	0	0	.
chr18	31679624	31679625	chr18:31679625:G:A	rs116688005	G	A	G	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr18	31687692	31687693	chr18:31687693:A:T	rs71361337	A	T	A	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr18	31794219	31794220	chr18:31794220:C:T	rs638252	C	T	T	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr18	32213562	32213563	chr18:32213563:C:T	rs335518	C	T	C	Hoxd9_MA0913.1	21	0	-	0	0	.
chr18	32548490	32548491	chr18:32548491:A:G	rs4799650	A	G	A	Hoxd9_MA0913.1	15	0	-	0	0	.
chr18	32608244	32608245	chr18:32608245:T:C	rs330318	T	C	T	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr18	32905796	32905797	chr18:32905797:T:C	rs7232256	T	C	C	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr18	32966332	32966333	chr18:32966333:T:C	rs74883326	T	C	T	Hoxd9_MA0913.1	3	1	-	8.323343304007485	6.495724363512382	CCAATAAAAA
chr18	33459826	33459827	chr18:33459827:G:C	rs11081812	G	C	G	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr18	33802521	33802522	chr18:33802522:A:G	rs7235698	A	G	G	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr18	33830272	33830273	chr18:33830273:T:C	rs768846	T	C	T	Hoxd9_MA0913.1	21	0	+	0	0	.
chr18	33830383	33830384	chr18:33830384:A:C	rs1032454	A	C	A	Hoxd9_MA0913.1	15	0	-	0	0	.
chr18	33830405	33830406	chr18:33830406:C:A	rs1032453	C	A	C	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr18	33852910	33852911	chr18:33852911:A:G	rs116742662	A	G	A	Hoxd9_MA0913.1	25	0	+	0	0	.
chr18	34259418	34259419	chr18:34259419:T:C	rs12052007	T	C	T	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr18	35089475	35089476	chr18:35089476:T:A	rs604578	T	A	A	Hoxd9_MA0913.1	19	0	+	0	0	.
chr18	35680801	35680802	chr18:35680802:A:G	rs7244122	A	G	A	Hoxd9_MA0913.1	4	1	-	8.187202972822991	4.895068721048011	GCAATTAAGA
chr18	35783150	35783151	chr18:35783151:G:C	chr18:35783151:G:C	G	C	G	Hoxd9_MA0913.1	25	0	-	0	0	.
chr18	35851669	35851670	chr18:35851670:A:T	rs8091898	A	T	A	Hoxd9_MA0913.1	9	1	+	8.32301137036169	8.079199333223738	GCAATAAATA
chr18	36091733	36091734	chr18:36091734:C:T	rs1789529	C	T	C	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr18	36482956	36482957	chr18:36482957:G:A	rs17673874	G	A	G	Hoxd9_MA0913.1	12	0	+	0	0	.
chr18	36510996	36510997	chr18:36510997:A:G	rs7242523	A	G	A	Hoxd9_MA0913.1	9	1	+	8.879672775420401	7.4131794346509094	GCCATAAAAA
chr18	36607272	36607273	chr18:36607273:A:G	rs2848905	A	G	a	Hoxd9_MA0913.1	9	1	-	8.635860738282448	7.7976343601680895	GCCATAAAAT
chr18	36757255	36757256	chr18:36757256:C:T	rs1001033	C	T	C	Hoxd9_MA0913.1	21	0	-	0	0	.
chr18	36758433	36758434	chr18:36758434:A:G	rs116920800	A	G	A	Hoxd9_MA0913.1	6	1	+	9.412035922551908	2.5966152547725674	GTAATTAAAA
chr18	36899489	36899490	chr18:36899490:A:G	rs181763757	A	G	A	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr18	37162662	37162663	chr18:37162663:C:T	rs323312	C	T	T	Hoxd9_MA0913.1	17	0	-	0	0	.
chr18	37563851	37563852	chr18:37563852:G:A	rs16969078	G	A	G	Hoxd9_MA0913.1	12	0	+	0	0	.
chr18	37698728	37698729	chr18:37698729:A:C	rs11659395	A	C	A	Hoxd9_MA0913.1	1	1	-	8.490366725581566	5.745937341025879	GTCATTAAAA
chr18	38053146	38053147	chr18:38053147:G:A	rs56085859	G	A	G	Hoxd9_MA0913.1	1	1	-	7.7976343601680895	7.449498732439066	GCCATAAAAC
chr18	38185562	38185563	chr18:38185563:T:C	rs17552090	T	C	T	Hoxd9_MA0913.1	27	0	+	0	0	.
chr18	38444777	38444778	chr18:38444778:A:T	rs965717494	A	T	A	Hoxd9_MA0913.1	6	1	+	9.412035922551908	6.988715975017923	GTAATTAAAA
chr18	38520115	38520116	chr18:38520116:A:G	rs17640951	A	G	A	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr18	39872243	39872244	chr18:39872244:T:C	rs17703217	T	C	T	Hoxd9_MA0913.1	18	0	+	0	0	.
chr18	40109560	40109561	chr18:40109561:T:C	rs7233432	T	C	T	Hoxd9_MA0913.1	12	0	+	0	0	.
chr18	40109568	40109569	chr18:40109569:A:G	rs17642617	A	G	A	Hoxd9_MA0913.1	20	0	+	0	0	.
chr18	40149796	40149797	chr18:40149797:T:G	rs2017653	T	G	T	Hoxd9_MA0913.1	6	1	-	8.531537147691377	4.056960285023171	GTCATAAAAA
chr18	40149812	40149813	chr18:40149813:A:C	rs4332809	A	C	A	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr18	41156104	41156105	chr18:41156105:T:A	rs17696732	T	A	.	Hoxd9_MA0913.1	28	0	+	0	0	.
chr18	41216375	41216376	chr18:41216376:A:G	rs12959850	A	G	A	Hoxd9_MA0913.1	28	0	+	0	0	.
chr18	41378267	41378268	chr18:41378268:A:T	rs77921181	A	T	A	Hoxd9_MA0913.1	18	0	+	0	0	.
chr18	41407013	41407014	chr18:41407014:T:C	rs8085690	T	C	T	Hoxd9_MA0913.1	11	0	-	0	0	.
chr18	41699898	41699899	chr18:41699899:C:T	rs16975198	C	T	C	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr18	41699930	41699931	chr18:41699931:G:T	rs76210344	G	T	G	Hoxd9_MA0913.1	19	0	+	0	0	.
chr18	41972456	41972457	chr18:41972457:T:G	rs144405297	T	G	T	Hoxd9_MA0913.1	9	1	-	8.323343304007485	7.241304888755173	CCAATAAAAA
chr18	42351168	42351169	chr18:42351169:A:G	rs382962	A	G	G	Hoxd9_MA0913.1	7	1	+	8.678133135028622	1.8389886576742773	GCAATTAAAC
chr18	42425151	42425152	chr18:42425152:T:G	rs73473217	T	G	T	Hoxd9_MA0913.1	6	1	-	8.323343304007485	3.8487664413392797	CCAATAAAAA
chr18	42510017	42510018	chr18:42510018:G:A	rs74921463	G	A	G	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr18	42901453	42901454	chr18:42901454:G:A	rs613538	G	A	A	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr18	43060320	43060321	chr18:43060321:T:C	rs547249332	T	C	T	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr18	43392457	43392458	chr18:43392458:T:A	rs532528	T	A	T	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr18	43576812	43576813	chr18:43576813:G:A	rs1880950	G	A	G	Hoxd9_MA0913.1	20	0	+	0	0	.
chr18	43863348	43863349	chr18:43863349:A:C	rs76188586	A	C	A	Hoxd9_MA0913.1	24	0	+	0	0	.
chr18	43935004	43935005	chr18:43935005:T:C	rs73954122	T	C	T	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr18	43935016	43935017	chr18:43935017:G:A	rs7239523	G	A	A	Hoxd9_MA0913.1	0	1	+	8.594690316172638	7.646956592762177	GCCATTAAAT
chr18	44046661	44046662	chr18:44046662:G:A	rs6507560	G	A	G	Hoxd9_MA0913.1	16	0	-	0	0	.
chr18	44393592	44393593	chr18:44393593:A:G	rs140280219	A	G	A	Hoxd9_MA0913.1	28	0	-	0	0	.
chr18	44505790	44505791	chr18:44505791:G:A	rs16978042	G	A	A	Hoxd9_MA0913.1	27	0	-	0	0	.
chr18	44536112	44536113	chr18:44536113:C:T	rs16978078	C	T	C	Hoxd9_MA0913.1	23	0	+	0	0	.
chr18	44678969	44678970	chr18:44678970:T:A	rs11876807	T	A	t	Hoxd9_MA0913.1	23	0	+	0	0	.
chr18	44678970	44678971	chr18:44678971:A:T	rs544258971	A	T	A	Hoxd9_MA0913.1	24	0	+	0	0	.
chr18	44731736	44731737	chr18:44731737:T:C	rs148851173	T	C	T	Hoxd9_MA0913.1	21	0	+	0	0	.
chr18	44741553	44741554	chr18:44741554:C:T	rs143030374	C	T	C	Hoxd9_MA0913.1	18	0	-	0	0	.
chr18	44925065	44925066	chr18:44925066:G:A	rs183753171	G	A	G	Hoxd9_MA0913.1	9	1	-	7.75646393805828	8.594690316172638	GCCATTAAAC
chr18	45016610	45016611	chr18:45016611:C:T	rs562934496	C	T	C	Hoxd9_MA0913.1	12	0	+	0	0	.
chr18	45363172	45363173	chr18:45363173:C:T	rs28539224	C	T	C	Hoxd9_MA0913.1	2	1	-	8.123883530932645	9.801341972390743	GCGATAAAAA
chr18	45517547	45517548	chr18:45517548:A:C	rs146541067	A	C	A	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr18	45539729	45539730	chr18:45539730:G:A	rs144817297	G	A	G	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr18	45540173	45540174	chr18:45540174:T:C	rs16978398	T	C	T	Hoxd9_MA0913.1	3	1	-	8.594690316172638	6.767071375677533	GCCATTAAAT
chr18	45570894	45570895	chr18:45570895:T:C	rs192771778	T	C	T	Hoxd9_MA0913.1	0	1	-	8.853608248980283	9.801341972390743	ACAATAAAAA
chr18	45612480	45612481	chr18:45612481:T:C	rs1905673	T	C	C	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr18	45635995	45635996	chr18:45635996:C:G	rs34514416	C	G	C	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr18	45684533	45684534	chr18:45684534:G:C	rs10468857	G	C	C	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr18	45889613	45889614	chr18:45889614:G:C	rs11082494	G	C	C	Hoxd9_MA0913.1	0	1	+	8.719303557138431	7.241304888755173	GCAATAAAAC
chr18	45916573	45916574	chr18:45916574:G:A	rs78339727	G	A	G	Hoxd9_MA0913.1	2	1	+	8.123883530932645	9.801341972390743	GCGATAAAAA
chr18	46073959	46073960	chr18:46073960:T:C	rs148289156	T	C	T	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr18	46193628	46193629	chr18:46193629:T:C	rs55767951	T	C	t	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr18	46638087	46638088	chr18:46638088:G:A	rs72915441	G	A	G	Hoxd9_MA0913.1	22	0	-	0	0	.
chr18	46638093	46638094	chr18:46638094:G:A	rs77493019	G	A	G	Hoxd9_MA0913.1	16	0	-	0	0	.
chr18	46897912	46897913	chr18:46897913:C:T	rs8092148	C	T	C	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr18	47119065	47119066	chr18:47119066:T:C	rs115556556	T	C	T	Hoxd9_MA0913.1	3	1	-	7.984561357794846	6.156942417299742	GCAATAAAGT
chr18	47121132	47121133	chr18:47121133:G:A	rs62096474	G	A	G	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr18	47426406	47426407	chr18:47426407:G:T	rs112974564	G	T	G	Hoxd9_MA0913.1	10	0	-	0	0	.
chr18	47511201	47511202	chr18:47511202:A:G	rs4940205	A	G	A	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr18	47699905	47699906	chr18:47699906:G:A	rs12605805	G	A	G	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr18	47717063	47717064	chr18:47717064:A:G	rs11661072	A	G	A	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr18	48021843	48021844	chr18:48021844:A:G	rs140014983	A	G	A	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr18	48065553	48065554	chr18:48065554:G:A	rs139641438	G	A	G	Hoxd9_MA0913.1	20	0	-	0	0	.
chr18	48100672	48100673	chr18:48100673:C:T	chr18:48100673:C:T	C	T	C	Hoxd9_MA0913.1	27	0	+	0	0	.
chr18	48106757	48106758	chr18:48106758:A:G	rs4527084	A	G	A	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr18	48322564	48322565	chr18:48322565:G:C	rs7238889	G	C	G	Hoxd9_MA0913.1	2	1	+	8.123883530932645	8.879672775420401	GCGATAAAAA
chr18	48873065	48873066	chr18:48873066:T:G	rs72915695	T	G	T	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr18	48999109	48999110	chr18:48999110:G:A	rs10853573	G	A	A	Hoxd9_MA0913.1	11	0	-	0	0	.
chr18	49053350	49053351	chr18:49053351:C:A	rs77292215	C	A	A	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr18	49339020	49339021	chr18:49339021:C:A	rs478682	C	A	A	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr18	49457790	49457791	chr18:49457791:T:C	rs12457921	T	C	C	Hoxd9_MA0913.1	21	0	-	0	0	.
chr18	49492839	49492840	chr18:49492840:A:G	rs3814888	A	G	A	Hoxd9_MA0913.1	12	0	+	0	0	.
chr18	49580862	49580863	chr18:49580863:C:T	rs55968030	C	T	C	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr18	49781779	49781780	chr18:49781780:A:G	rs11659231	A	G	A	Hoxd9_MA0913.1	5	1	+	9.801341972390743	3.5796788194948737	GCAATAAAAA
chr18	49877406	49877407	chr18:49877407:G:C	rs9951470	G	C	G	Hoxd9_MA0913.1	29	0	-	0	0	.
chr18	50013650	50013651	chr18:50013651:G:A	rs117180103	G	A	G	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr18	50155571	50155572	chr18:50155572:C:G	rs1705511	C	G	C	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr18	50309258	50309259	chr18:50309259:G:C	rs9675965	G	C	G	Hoxd9_MA0913.1	18	0	-	0	0	.
chr18	50374201	50374202	chr18:50374202:C:G	rs78075672	C	G	C	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr18	50591989	50591990	chr18:50591990:G:A	rs4322755	G	A	G	Hoxd9_MA0913.1	26	0	-	0	0	.
chr18	50820754	50820755	chr18:50820755:A:G	rs2849237	A	G	A	Hoxd9_MA0913.1	6	1	+	7.932552609785828	1.1171319420064885	GCAGTTAAAA
chr18	50821073	50821074	chr18:50821074:T:C	rs141741015	T	C	T	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr18	50880145	50880146	chr18:50880146:A:G	rs893512537	A	G	A	Hoxd9_MA0913.1	12	0	-	0	0	.
chr18	51027798	51027799	chr18:51027799:C:A	rs35656226	C	A	C	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr18	51039923	51039924	chr18:51039924:A:G	rs1039603397	A	G	A	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr18	51083885	51083886	chr18:51083886:T:C	rs146551171	T	C	T	Hoxd9_MA0913.1	8	1	-	9.209394307523764	7.636425730065822	GTAATAAAAT
chr18	51257336	51257337	chr18:51257337:T:C	rs77392911	T	C	T	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr18	51531622	51531623	chr18:51531623:G:A	rs1056419131	G	A	G	Hoxd9_MA0913.1	22	0	+	0	0	.
chr18	51753412	51753413	chr18:51753413:T:G	rs323110	T	G	G	Hoxd9_MA0913.1	7	1	-	8.853608248980283	5.559761497261851	ACAATAAAAA
chr18	51756598	51756599	chr18:51756599:A:C	rs323117	A	C	C	Hoxd9_MA0913.1	25	0	+	0	0	.
chr18	52499771	52499772	chr18:52499772:C:G	rs6508144	C	G	C	Hoxd9_MA0913.1	0	1	-	8.490366725581566	7.012368057198309	GTCATTAAAA
chr18	52532048	52532049	chr18:52532049:G:A	rs182815600	G	A	G	Hoxd9_MA0913.1	2	1	-	8.531537147691377	3.002862312810936	GTCATAAAAA
chr18	52995195	52995196	chr18:52995196:T:G	rs9304437	T	G	G	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr18	53249920	53249921	chr18:53249921:T:G	rs1078459	T	G	G	Hoxd9_MA0913.1	1	1	+	8.287725110553424	5.543295725997735	GTCATAAAAT
chr18	53886026	53886027	chr18:53886027:C:T	rs918837	C	T	T	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr18	54507879	54507880	chr18:54507880:T:G	rs7238487	T	G	T	Hoxd9_MA0913.1	4	1	+	7.932552609785828	4.64041835801085	GCAGTTAAAA
chr18	54727879	54727880	chr18:54727880:C:T	rs9807480	C	T	T	Hoxd9_MA0913.1	0	1	-	8.719303557138431	7.7715698337279715	GCAATAAAAC
chr18	54774555	54774556	chr18:54774556:C:T	rs11876447	C	T	C	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr18	55138644	55138645	chr18:55138645:G:A	rs10502995	G	A	G	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr18	55239598	55239599	chr18:55239599:T:G	rs60565673	T	G	G	Hoxd9_MA0913.1	13	0	-	0	0	.
chr18	55240588	55240589	chr18:55240589:A:C	rs1261073	A	C	C	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr18	55415742	55415743	chr18:55415743:C:T	rs2119292	C	T	T	Hoxd9_MA0913.1	18	0	-	0	0	.
chr18	55694567	55694568	chr18:55694568:G:A	rs543938175	G	A	G	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr18	55935056	55935057	chr18:55935057:T:G	rs77772230	T	G	T	Hoxd9_MA0913.1	12	0	-	0	0	.
chr18	56118440	56118441	chr18:56118441:A:G	rs1792692	A	G	A	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr18	56502505	56502506	chr18:56502506:C:A	rs4800948	C	A	C	Hoxd9_MA0913.1	1	1	+	9.51635951314298	7.09654113711772	GCAATTAAAT
chr18	56574792	56574793	chr18:56574793:A:G	rs602339	A	G	A	Hoxd9_MA0913.1	15	0	-	0	0	.
chr18	57225024	57225025	chr18:57225025:A:T	rs149574361	A	T	A	Hoxd9_MA0913.1	22	0	-	0	0	.
chr18	57353445	57353446	chr18:57353446:T:G	rs10048396	T	G	G	Hoxd9_MA0913.1	14	0	-	0	0	.
chr18	57353469	57353470	chr18:57353470:G:A	rs34695623	G	A	G	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr18	57427071	57427072	chr18:57427072:T:C	rs115679799	T	C	T	Hoxd9_MA0913.1	4	1	+	8.323343304007485	5.031209052232505	CCAATAAAAA
chr18	57434683	57434684	chr18:57434684:G:A	rs3760615	G	A	G	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr18	57524380	57524381	chr18:57524381:C:G	rs1599238	C	G	C	Hoxd9_MA0913.1	9	1	+	8.329997507299597	7.945542581782417	GTAATTAAAC
chr18	57668007	57668008	chr18:57668008:A:G	rs4940499	A	G	A	Hoxd9_MA0913.1	14	0	-	0	0	.
chr18	57780465	57780466	chr18:57780466:T:C	rs147553764	T	C	T	Hoxd9_MA0913.1	13	0	+	0	0	.
chr18	57780469	57780470	chr18:57780470:G:C	rs377363478	G	C	G	Hoxd9_MA0913.1	17	0	+	0	0	.
chr18	57811890	57811891	chr18:57811891:T:C	rs8089206	T	C	T	Hoxd9_MA0913.1	14	0	-	0	0	.
chr18	57994064	57994065	chr18:57994065:C:T	rs9646592	C	T	C	Hoxd9_MA0913.1	16	0	-	0	0	.
chr18	58136356	58136357	chr18:58136357:G:T	rs75762012	G	T	G	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr18	58160652	58160653	chr18:58160653:G:C	rs60719847	G	C	G	Hoxd9_MA0913.1	20	0	+	0	0	.
chr18	58370616	58370617	chr18:58370617:A:G	rs2075405	A	G	a	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr18	58453816	58453817	chr18:58453817:G:T	rs2277721	G	T	G	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr18	58577486	58577487	chr18:58577487:T:C	rs7505417	T	C	t	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr18	58779669	58779670	chr18:58779670:A:G	rs7238068	A	G	G	Hoxd9_MA0913.1	23	0	-	0	0	.
chr18	58829513	58829514	chr18:58829514:C:T	rs8086507	C	T	C	Hoxd9_MA0913.1	25	0	-	0	0	.
chr18	58937206	58937207	chr18:58937207:C:T	rs9954536	C	T	C	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr18	58999152	58999153	chr18:58999153:C:G	rs147625147	C	G	C	Hoxd9_MA0913.1	28	0	-	0	0	.
chr18	59075905	59075906	chr18:59075906:A:G	rs12326997	A	G	G	Hoxd9_MA0913.1	2	1	+	8.323343304007485	6.645884862549387	CCAATAAAAA
chr18	59286771	59286772	chr18:59286772:T:C	rs9973070	T	C	C	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr18	59414321	59414322	chr18:59414322:T:C	rs12956328	T	C	T	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr18	59414335	59414336	chr18:59414336:C:A	rs12970007	C	A	A	Hoxd9_MA0913.1	13	0	+	0	0	.
chr18	59484688	59484689	chr18:59484689:A:G	rs625298	A	G	A	Hoxd9_MA0913.1	26	0	-	0	0	.
chr18	59535792	59535793	chr18:59535793:G:A	rs4940468	G	A	G	Hoxd9_MA0913.1	1	1	-	8.32301137036169	7.974875742632667	GCAATAAATA
chr18	59549457	59549458	chr18:59549458:C:G	rs1944984	C	G	G	Hoxd9_MA0913.1	14	0	-	0	0	.
chr18	59576127	59576128	chr18:59576128:C:A	rs2851855	C	A	A	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr18	59623830	59623831	chr18:59623831:C:A	rs192251279	C	A	C	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr18	59689959	59689960	chr18:59689960:C:T	rs1429576	C	T	C	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr18	59940177	59940178	chr18:59940178:C:T	rs12966717	C	T	C	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr18	59990896	59990897	chr18:59990897:A:C	rs7228237	A	C	A	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr18	60544382	60544383	chr18:60544383:A:C	rs12960864	A	C	A	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr18	60717579	60717580	chr18:60717580:C:T	rs4940966	C	T	T	Hoxd9_MA0913.1	0	1	-	8.334848631621252	7.387114908210791	GCAATAAAAG
chr18	60808469	60808470	chr18:60808470:A:G	rs116291639	A	G	A	Hoxd9_MA0913.1	13	0	-	0	0	.
chr18	61001294	61001295	chr18:61001295:C:T	rs41508045	C	T	G	Hoxd9_MA0913.1	20	0	-	0	0	.
chr18	61001316	61001317	chr18:61001317:C:T	rs562407144	C	T	C	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr18	61238988	61238989	chr18:61238989:C:T	rs17685117	C	T	C	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr18	61471696	61471697	chr18:61471697:G:T	rs72993709	G	T	G	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr18	61471732	61471733	chr18:61471733:C:T	rs77481770	C	T	C	Hoxd9_MA0913.1	20	0	+	0	0	.
chr18	61473806	61473807	chr18:61473807:G:C	rs9959118	G	C	G	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr18	61557098	61557099	chr18:61557099:A:C	rs73455327	A	C	A	Hoxd9_MA0913.1	7	1	+	8.329997507299597	5.036150755581165	GTAATTAAAC
chr18	61580211	61580212	chr18:61580212:T:A	rs896644	T	A	.	Hoxd9_MA0913.1	29	0	+	0	0	.
chr18	61595957	61595958	chr18:61595958:C:T	rs6567224	C	T	C	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr18	61609288	61609289	chr18:61609289:T:G	rs73965706	T	G	T	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr18	61832663	61832664	chr18:61832664:C:T	rs8094305	C	T	T	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr18	61833513	61833514	chr18:61833514:G:A	rs4941069	G	A	G	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr18	61946767	61946768	chr18:61946768:A:G	rs17069086	A	G	G	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr18	62038514	62038515	chr18:62038515:G:T	rs17069361	G	T	G	Hoxd9_MA0913.1	0	1	+	8.531537147691377	5.494394451738508	GTCATAAAAA
chr18	62206717	62206718	chr18:62206718:A:G	rs28661907	A	G	A	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr18	62327134	62327135	chr18:62327135:C:G	rs4245291	C	G	G	Hoxd9_MA0913.1	29	0	+	0	0	.
chr18	62328951	62328952	chr18:62328952:G:A	rs76382273	G	A	G	Hoxd9_MA0913.1	11	0	+	0	0	.
chr18	62396990	62396991	chr18:62396991:T:G	rs2957134	T	G	T	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr18	62437000	62437001	chr18:62437001:G:A	rs56145860	G	A	A	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr18	62591087	62591088	chr18:62591088:T:G	rs589360	T	G	G	Hoxd9_MA0913.1	19	0	-	0	0	.
chr18	62633337	62633338	chr18:62633338:C:T	rs9946161	C	T	T	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr18	62633361	62633362	chr18:62633362:G:A	rs149115621	G	A	G	Hoxd9_MA0913.1	22	0	+	0	0	.
chr18	62717672	62717673	chr18:62717673:C:T	rs1478059	C	T	C	Hoxd9_MA0913.1	22	0	+	0	0	.
chr18	63071384	63071385	chr18:63071385:T:C	rs7243184	T	C	C	Hoxd9_MA0913.1	13	0	-	0	0	.
chr18	63139958	63139959	chr18:63139959:C:T	rs62100177	C	T	C	Hoxd9_MA0913.1	10	0	+	0	0	.
chr18	63150472	63150473	chr18:63150473:G:A	rs11876772	G	A	A	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr18	63186411	63186412	chr18:63186412:C:A	rs73963708	C	A	C	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr18	63346952	63346953	chr18:63346953:A:C	rs2615196	A	C	C	Hoxd9_MA0913.1	8	1	+	8.531537147691377	6.531873508038837	GTCATAAAAA
chr18	63505047	63505048	chr18:63505048:T:C	rs11542560	T	C	C	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr18	63579694	63579695	chr18:63579695:A:G	rs11665459	A	G	G	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr18	63579730	63579731	chr18:63579731:A:G	rs11665481	A	G	G	Hoxd9_MA0913.1	16	0	+	0	0	.
chr18	63579741	63579742	chr18:63579742:A:C	rs11665483	A	C	A	Hoxd9_MA0913.1	27	0	+	0	0	.
chr18	63728324	63728325	chr18:63728325:G:T	rs7228368	G	T	T	Hoxd9_MA0913.1	0	1	+	8.531537147691377	5.494394451738508	GTCATAAAAA
chr18	63777697	63777698	chr18:63777698:C:T	rs1506412	C	T	C	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr18	63913593	63913594	chr18:63913594:G:A	rs8086048	G	A	G	Hoxd9_MA0913.1	23	0	-	0	0	.
chr18	63963649	63963650	chr18:63963650:G:C	rs8090586	G	C	C	Hoxd9_MA0913.1	24	0	-	0	0	.
chr18	64179917	64179918	chr18:64179918:T:A	rs77963276	T	A	T	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr18	64400503	64400504	chr18:64400504:T:C	rs12959698	T	C	T	Hoxd9_MA0913.1	4	1	+	8.60979621184233	5.317661960067349	ACAATAAAAT
chr18	64585864	64585865	chr18:64585865:T:A	rs10048290	T	A	A	Hoxd9_MA0913.1	24	0	+	0	0	.
chr18	64585922	64585923	chr18:64585923:A:G	rs10048391	A	G	G	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr18	64708251	64708252	chr18:64708252:T:A	rs12326085	T	A	T	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr18	65082515	65082516	chr18:65082516:T:C	rs597579	T	C	T	Hoxd9_MA0913.1	28	0	-	0	0	.
chr18	65359275	65359276	chr18:65359276:T:C	rs12954043	T	C	T	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr18	66772962	66772963	chr18:66772963:C:G	rs8091642	C	G	G	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr18	66967439	66967440	chr18:66967440:C:T	rs714600	C	T	T	Hoxd9_MA0913.1	12	0	+	0	0	.
chr18	67266328	67266329	chr18:67266329:C:T	rs190539473	C	T	C	Hoxd9_MA0913.1	14	0	+	0	0	.
chr18	67266329	67266330	chr18:67266330:G:A	rs11874048	G	A	G	Hoxd9_MA0913.1	15	0	+	0	0	.
chr18	67279165	67279166	chr18:67279166:T:A	rs716669	T	A	A	Hoxd9_MA0913.1	20	0	+	0	0	.
chr18	67621154	67621155	chr18:67621155:A:G	rs894909	A	G	A	Hoxd9_MA0913.1	25	0	-	0	0	.
chr18	67862345	67862346	chr18:67862346:C:T	rs114443535	C	T	C	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr18	67864907	67864908	chr18:67864908:A:G	rs62091627	A	G	A	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr18	67964596	67964597	chr18:67964597:T:G	rs9675579	T	G	G	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr18	68132595	68132596	chr18:68132596:A:G	rs9944822	A	G	G	Hoxd9_MA0913.1	9	1	+	8.838502353310592	7.3720090125411	GCCATTAAAA
chr18	69640087	69640088	chr18:69640088:G:A	rs9953464	G	A	G	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr18	70332650	70332651	chr18:70332651:A:C	rs9966549	A	C	A	Hoxd9_MA0913.1	5	1	-	9.168223885413955	2.9877311546278964	GTAATTAAAT
chr18	70421919	70421920	chr18:70421920:C:T	rs11151583	C	T	T	Hoxd9_MA0913.1	10	0	-	0	0	.
chr18	70623142	70623143	chr18:70623143:G:A	rs17082921	G	A	G	Hoxd9_MA0913.1	1	1	-	7.7976343601680895	7.449498732439066	GCCATAAAAC
chr18	70672813	70672814	chr18:70672814:C:T	rs556807958	C	T	C	Hoxd9_MA0913.1	26	0	+	0	0	.
chr18	70683339	70683340	chr18:70683340:C:T	rs12456677	C	T	C	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr18	71165533	71165534	chr18:71165534:A:C	rs12963202	A	C	C	Hoxd9_MA0913.1	13	0	-	0	0	.
chr18	71281762	71281763	chr18:71281763:A:G	rs72955001	A	G	A	Hoxd9_MA0913.1	5	1	+	7.973723031895638	1.7520598789997708	GCAGTAAAAA
chr18	71505702	71505703	chr18:71505703:T:C	rs7239293	T	C	C	Hoxd9_MA0913.1	20	0	-	0	0	.
chr18	71523685	71523686	chr18:71523686:C:T	rs615220	C	T	T	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr18	71689775	71689776	chr18:71689776:A:G	rs55833688	A	G	A	Hoxd9_MA0913.1	5	1	+	8.60979621184233	2.388133058946461	ACAATAAAAT
chr18	71689784	71689785	chr18:71689785:G:T	rs7242773	G	T	T	Hoxd9_MA0913.1	14	0	+	0	0	.
chr18	71844982	71844983	chr18:71844983:C:A	rs1394988	C	A	A	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr18	72171632	72171633	chr18:72171633:C:T	rs78093521	C	T	C	Hoxd9_MA0913.1	17	0	+	0	0	.
chr18	72375398	72375399	chr18:72375399:G:A	rs7506364	G	A	G	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr18	72752051	72752052	chr18:72752052:T:C	rs72962350	T	C	C	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr18	73283876	73283877	chr18:73283877:A:C	rs79675858	A	C	A	Hoxd9_MA0913.1	16	0	-	0	0	.
chr18	73283878	73283879	chr18:73283879:T:C	rs4619489	T	C	C	Hoxd9_MA0913.1	14	0	-	0	0	.
chr18	73312306	73312307	chr18:73312307:T:C	rs7233319	T	C	C	Hoxd9_MA0913.1	14	0	+	0	0	.
chr18	73381544	73381545	chr18:73381545:G:T	rs6566725	G	T	T	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr18	73381862	73381863	chr18:73381863:C:G	rs34368689	C	G	C	Hoxd9_MA0913.1	0	1	-	9.801341972390743	8.323343304007485	GCAATAAAAA
chr18	73409287	73409288	chr18:73409288:T:C	rs6566728	T	C	C	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr18	73670971	73670972	chr18:73670972:G:A	rs188818413	G	A	G	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr18	73787602	73787603	chr18:73787603:C:A	rs72980508	C	A	C	Hoxd9_MA0913.1	22	0	+	0	0	.
chr18	73839567	73839568	chr18:73839568:G:A	rs72980567	G	A	G	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr18	74116080	74116081	chr18:74116081:T:C	rs117731693	T	C	T	Hoxd9_MA0913.1	8	1	-	8.329997507299597	6.7570289298416535	GTAATTAAAC
chr18	74222624	74222625	chr18:74222625:A:T	rs6566786	A	T	T	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr18	74234216	74234217	chr18:74234217:A:G	rs79179365	A	G	A	Hoxd9_MA0913.1	0	1	+	8.853608248980283	9.801341972390743	ACAATAAAAA
chr18	74294491	74294492	chr18:74294492:G:A	rs1788615	G	A	A	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr18	74356616	74356617	chr18:74356617:C:T	rs9807250	C	T	T	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr18	74407101	74407102	chr18:74407102:C:T	rs546928362	C	T	C	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr18	74407241	74407242	chr18:74407242:A:G	rs1256716	A	G	G	Hoxd9_MA0913.1	28	0	-	0	0	.
chr18	74407255	74407256	chr18:74407256:C:T	rs11663476	C	T	T	Hoxd9_MA0913.1	14	0	-	0	0	.
chr18	74497961	74497962	chr18:74497962:G:A	rs140699832	G	A	G	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr18	74540824	74540825	chr18:74540825:G:A	rs8085167	G	A	G	Hoxd9_MA0913.1	17	0	+	0	0	.
chr18	74540828	74540829	chr18:74540829:A:C	rs17238285	A	C	C	Hoxd9_MA0913.1	21	0	+	0	0	.
chr18	74550317	74550318	chr18:74550318:A:G	rs62099910	A	G	A	Hoxd9_MA0913.1	12	0	-	0	0	.
chr18	74574456	74574457	chr18:74574457:T:C	rs12456406	T	C	C	Hoxd9_MA0913.1	24	0	+	0	0	.
chr18	74594805	74594806	chr18:74594806:T:C	rs7506112	T	C	T	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr18	74645832	74645833	chr18:74645833:A:C	rs1156892702	A	C	A	Hoxd9_MA0913.1	29	0	+	0	0	.
chr18	74724663	74724664	chr18:74724664:A:G	rs56407596	A	G	A	Hoxd9_MA0913.1	25	0	-	0	0	.
chr18	74804587	74804588	chr18:74804588:T:C	rs17244039	T	C	T	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr18	75055809	75055810	chr18:75055810:A:C	rs76924808	A	C	A	Hoxd9_MA0913.1	12	0	+	0	0	.
chr18	75173037	75173038	chr18:75173038:G:A	rs651006	G	A	G	Hoxd9_MA0913.1	26	0	-	0	0	.
chr18	75214086	75214087	chr18:75214087:T:C	rs2581651	T	C	T	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr18	75284370	75284371	chr18:75284371:C:T	rs41404946	C	T	C	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr18	75424261	75424262	chr18:75424262:C:G	rs8093397	C	G	G	Hoxd9_MA0913.1	0	1	-	9.209394307523764	7.731395639140507	GTAATAAAAT
chr18	75424265	75424266	chr18:75424266:T:A	rs8087297	T	A	T	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr18	76052247	76052248	chr18:76052248:T:C	rs182696549	T	C	T	Hoxd9_MA0913.1	14	0	+	0	0	.
chr18	76445111	76445112	chr18:76445112:C:T	rs2848958	C	T	C	Hoxd9_MA0913.1	21	0	+	0	0	.
chr18	76473526	76473527	chr18:76473527:T:C	rs9946711	T	C	T	Hoxd9_MA0913.1	27	0	+	0	0	.
chr18	76488272	76488273	chr18:76488273:T:C	rs2406196	T	C	C	Hoxd9_MA0913.1	14	0	+	0	0	.
chr18	76570526	76570527	chr18:76570527:T:C	rs8095535	T	C	T	Hoxd9_MA0913.1	25	0	+	0	0	.
chr18	76653897	76653898	chr18:76653898:G:A	rs74342748	G	A	G	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr18	76794808	76794809	chr18:76794809:C:G	rs8092507	C	G	C	Hoxd9_MA0913.1	19	0	+	0	0	.
chr18	77174138	77174139	chr18:77174139:G:A	rs1789132	G	A	G	Hoxd9_MA0913.1	26	0	-	0	0	.
chr18	77374309	77374310	chr18:77374310:C:T	rs35500429	C	T	C	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr18	77374453	77374454	chr18:77374454:A:G	rs2717151	A	G	G	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr18	77423254	77423255	chr18:77423255:C:A	rs6565967	C	A	C	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr18	77458250	77458251	chr18:77458251:C:T	rs34417311	C	T	C	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr18	77659966	77659967	chr18:77659967:A:C	rs356153	A	C	A	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr18	78071800	78071801	chr18:78071801:T:A	rs113544972	T	A	T	Hoxd9_MA0913.1	13	0	-	0	0	.
chr18	78112725	78112726	chr18:78112726:G:C	rs2411412	G	C	G	Hoxd9_MA0913.1	0	1	+	8.287725110553424	6.809726442170165	GTCATAAAAT
chr18	78207723	78207724	chr18:78207724:A:G	rs145599695	A	G	A	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr18	78581209	78581210	chr18:78581210:T:C	rs34627287	T	C	T	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr18	78930673	78930674	chr18:78930674:T:A	rs58090320	T	A	T	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr18	79069909	79069910	chr18:79069910:G:C	rs140465874	G	C	G	Hoxd9_MA0913.1	24	0	-	0	0	.
chr18	79069951	79069952	chr18:79069952:T:C	rs4337369	T	C	C	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr18	79405796	79405797	chr18:79405797:C:T	rs149369389	C	T	C	Hoxd9_MA0913.1	20	0	-	0	0	.
chr18	79493544	79493545	chr18:79493545:G:T	chr18:79493545:G:T	G	T	G	Hoxd9_MA0913.1	16	0	+	0	0	.
chr18	79601157	79601158	chr18:79601158:T:A	rs1660179	T	A	T	Hoxd9_MA0913.1	21	0	+	0	0	.
chr18	80006935	80006936	chr18:80006936:G:A	rs2364974	G	A	A	Hoxd9_MA0913.1	24	0	-	0	0	.
chr18	80006939	80006940	chr18:80006940:C:T	rs748177008	C	T	C	Hoxd9_MA0913.1	20	0	-	0	0	.
chr18	80035025	80035026	chr18:80035026:T:C	rs147309919	T	C	T	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr18	80144052	80144053	chr18:80144053:C:T	rs58835296	C	T	C	Hoxd9_MA0913.1	2	1	+	8.287725110553424	2.759050275672983	GTCATAAAAT
chr18	80226833	80226834	chr18:80226834:A:T	rs11659843	A	T	A	Hoxd9_MA0913.1	22	0	-	0	0	.
chr19	266543	266544	chr19:266544:C:T	rs8106462	C	T	G	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr19	295983	295984	chr19:295984:T:C	rs150777259	T	C	T	Hoxd9_MA0913.1	9	1	-	7.401342173391351	5.934848832621858	GCCATAAATA
chr19	313301	313302	chr19:313302:T:A	rs72984430	T	A	T	Hoxd9_MA0913.1	26	0	-	0	0	.
chr19	349887	349888	chr19:349888:A:G	rs8105194	A	G	A	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr19	392839	392840	chr19:392840:A:G	rs10418459	A	G	G	Hoxd9_MA0913.1	19	0	+	0	0	.
chr19	542597	542598	chr19:542598:G:A	rs16990696	G	A	G	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr19	611568	611569	chr19:611569:G:A	rs117573921	G	A	G	Hoxd9_MA0913.1	28	0	-	0	0	.
chr19	689003	689004	chr19:689004:G:T	rs12609586	G	T	G	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr19	792890	792891	chr19:792891:T:C	rs73490574	T	C	C	Hoxd9_MA0913.1	28	0	+	0	0	.
chr19	855161	855162	chr19:855162:T:A	rs7250194	T	A	-	Hoxd9_MA0913.1	5	1	-	8.505472621251258	8.464302199141448	ATAATAAAAA
chr19	911452	911453	chr19:911453:A:C	rs1982772	A	C	-	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr19	921501	921502	chr19:921502:T:G	rs73507533	T	G	G	Hoxd9_MA0913.1	11	0	+	0	0	.
chr19	928295	928296	chr19:928296:C:T	rs559212400	C	T	C	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr19	935457	935458	chr19:935458:C:T	rs112201952	C	T	C	Hoxd9_MA0913.1	22	0	-	0	0	.
chr19	1027501	1027502	chr19:1027502:C:T	rs73920546	C	T	C	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr19	1095823	1095824	chr19:1095824:T:A	rs55917129	T	A	T	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr19	1099069	1099070	chr19:1099070:G:A	rs4806970	G	A	G	Hoxd9_MA0913.1	28	0	-	0	0	.
chr19	1361579	1361580	chr19:1361580:A:G	rs1259794682	A	G	A	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr19	1524064	1524065	chr19:1524065:T:C	rs532342113	T	C	t	Hoxd9_MA0913.1	23	0	+	0	0	.
chr19	1524065	1524066	chr19:1524066:C:G	rs2277751	C	G	c	Hoxd9_MA0913.1	24	0	+	0	0	.
chr19	2021909	2021910	chr19:2021910:G:A	rs6510636	G	A	g	Hoxd9_MA0913.1	14	0	-	0	0	.
chr19	2028985	2028986	chr19:2028986:T:C	rs7257116	T	C	C	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr19	2094805	2094806	chr19:2094806:G:A	rs373668642	G	A	G	Hoxd9_MA0913.1	11	0	-	0	0	.
chr19	2154902	2154903	chr19:2154903:G:T	chr19:2154903:G:T	G	T	G	Hoxd9_MA0913.1	25	0	+	0	0	.
chr19	2399260	2399261	chr19:2399261:C:T	rs79824768	C	T	c	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr19	2403564	2403565	chr19:2403565:G:A	rs187724753	G	A	G	Hoxd9_MA0913.1	14	0	+	0	0	.
chr19	2403565	2403566	chr19:2403566:T:G	rs7248779	T	G	G	Hoxd9_MA0913.1	15	0	+	0	0	.
chr19	2417050	2417051	chr19:2417051:T:C	rs545212904	T	C	T	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr19	2571321	2571322	chr19:2571322:C:T	rs7248782	C	T	C	Hoxd9_MA0913.1	28	0	-	0	0	.
chr19	2631663	2631664	chr19:2631664:G:A	chr19:2631664:G:A	G	A	G	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr19	2783766	2783767	chr19:2783767:C:T	rs73522750	C	T	C	Hoxd9_MA0913.1	16	0	-	0	0	.
chr19	2923678	2923679	chr19:2923679:A:T	rs79494490	A	T	a	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr19	3112024	3112025	chr19:3112025:A:G	rs308063	A	G	A	Hoxd9_MA0913.1	23	0	-	0	0	.
chr19	3144357	3144358	chr19:3144358:C:T	rs62127294	C	T	c	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr19	3185707	3185708	chr19:3185708:G:T	rs1037018611	G	T	G	Hoxd9_MA0913.1	1	1	-	9.55752993525279	7.13771155922753	GCAATAAAAT
chr19	3237393	3237394	chr19:3237394:G:A	rs8103081	G	A	-	Hoxd9_MA0913.1	10	0	-	0	0	.
chr19	3432285	3432286	chr19:3432286:A:G	rs4806935	A	G	G	Hoxd9_MA0913.1	13	0	-	0	0	.
chr19	3450895	3450896	chr19:3450896:G:A	rs188444715	G	A	G	Hoxd9_MA0913.1	1	1	-	7.241304888755173	6.893169261026149	CCAATAAAAC
chr19	3653104	3653105	chr19:3653105:A:G	rs2074956	A	G	G	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr19	3669601	3669602	chr19:3669602:C:T	rs72980700	C	T	C	Hoxd9_MA0913.1	0	1	-	7.449498732439066	6.501765009028604	GTCATAAAAC
chr19	4037967	4037968	chr19:4037968:T:C	rs72976977	T	C	T	Hoxd9_MA0913.1	9	1	-	8.853608248980283	7.387114908210791	ACAATAAAAA
chr19	4059909	4059910	chr19:4059910:C:A	rs537006455	C	A	C	Hoxd9_MA0913.1	27	0	+	0	0	.
chr19	4204965	4204966	chr19:4204966:A:G	rs141453290	A	G	G	Hoxd9_MA0913.1	25	0	+	0	0	.
chr19	4347575	4347576	chr19:4347576:C:T	rs6510807	C	T	T	Hoxd9_MA0913.1	12	0	-	0	0	.
chr19	4544641	4544642	chr19:4544642:T:C	rs79052519	T	C	T	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr19	4647045	4647046	chr19:4647046:G:A	rs118101039	G	A	G	Hoxd9_MA0913.1	13	0	-	0	0	.
chr19	4724508	4724509	chr19:4724509:T:G	rs139719395	T	G	T	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr19	4754238	4754239	chr19:4754239:G:A	rs35746455	G	A	g	Hoxd9_MA0913.1	23	0	-	0	0	.
chr19	4843231	4843232	chr19:4843232:T:C	rs12608908	T	C	T	Hoxd9_MA0913.1	25	0	+	0	0	.
chr19	4933764	4933765	chr19:4933765:G:A	rs8107449	G	A	T	Hoxd9_MA0913.1	23	0	-	0	0	.
chr19	5050094	5050095	chr19:5050095:C:G	rs141073265	C	G	C	Hoxd9_MA0913.1	27	0	-	0	0	.
chr19	5060948	5060949	chr19:5060949:C:T	rs755396980	C	T	C	Hoxd9_MA0913.1	21	0	-	0	0	.
chr19	5080182	5080183	chr19:5080183:A:T	rs2613778	A	T	A	Hoxd9_MA0913.1	24	0	+	0	0	.
chr19	5178312	5178313	chr19:5178313:G:A	rs741696	G	A	N	Hoxd9_MA0913.1	0	1	+	8.490366725581566	7.542633002171106	GTCATTAAAA
chr19	5319869	5319870	chr19:5319870:C:T	rs77440484	C	T	C	Hoxd9_MA0913.1	21	0	+	0	0	.
chr19	5426437	5426438	chr19:5426438:T:C	rs8111234	T	C	C	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr19	5470625	5470626	chr19:5470626:T:G	rs415427	T	G	G	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr19	5536992	5536993	chr19:5536993:G:A	rs766655	G	A	a	Hoxd9_MA0913.1	24	0	-	0	0	.
chr19	5857586	5857587	chr19:5857587:G:T	rs56254644	G	T	g	Hoxd9_MA0913.1	2	1	+	7.73457748109381	2.9616918907011263	GTGATTAAAA
chr19	5874793	5874794	chr19:5874794:A:G	rs76953656	A	G	A	Hoxd9_MA0913.1	29	0	+	0	0	.
chr19	5954150	5954151	chr19:5954151:A:C	rs4807826	A	C	C	Hoxd9_MA0913.1	19	0	+	0	0	.
chr19	6043584	6043585	chr19:6043585:T:G	rs182794516	T	G	T	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr19	6062499	6062500	chr19:6062500:A:G	rs111354460	A	G	A	Hoxd9_MA0913.1	12	0	-	0	0	.
chr19	6062521	6062522	chr19:6062522:C:T	rs118134361	C	T	C	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr19	6088897	6088898	chr19:6088898:C:A	chr19:6088898:C:A	C	A	C	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr19	6160510	6160511	chr19:6160511:G:T	rs79864873	G	T	G	Hoxd9_MA0913.1	11	0	-	0	0	.
chr19	6315823	6315824	chr19:6315824:A:C	rs77101163	A	C	A	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr19	6556896	6556897	chr19:6556897:T:A	rs148922580	T	A	t	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr19	6624523	6624524	chr19:6624524:G:A	rs10424924	G	A	G	Hoxd9_MA0913.1	24	0	+	0	0	.
chr19	6680498	6680499	chr19:6680499:C:T	rs11569557	C	T	C	Hoxd9_MA0913.1	2	1	+	7.4016741070371435	1.872999272156703	CCCATAAAAA
chr19	6790762	6790763	chr19:6790763:G:A	rs145581663	G	A	G	Hoxd9_MA0913.1	10	0	-	0	0	.
chr19	6790763	6790764	chr19:6790764:T:C	rs79255239	T	C	T	Hoxd9_MA0913.1	9	1	-	8.464302199141448	6.997808858371956	ATAATTAAAA
chr19	6907664	6907665	chr19:6907665:G:A	rs2607126	G	A	G	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr19	6984915	6984916	chr19:6984916:T:C	rs34752448	T	C	C	Hoxd9_MA0913.1	8	1	-	9.801341972390743	8.2283733949328	GCAATAAAAA
chr19	7189552	7189553	chr19:7189553:T:A	rs57274677	T	A	T	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr19	7196612	7196613	chr19:7196613:T:G	rs62111422	T	G	T	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr19	7251576	7251577	chr19:7251577:A:T	rs10415205	A	T	A	Hoxd9_MA0913.1	5	1	-	7.360503684927334	7.4016741070371435	CCCATTAAAA
chr19	7287999	7288000	chr19:7288000:G:A	rs8111943	G	A	G	Hoxd9_MA0913.1	26	0	+	0	0	.
chr19	7321200	7321201	chr19:7321201:G:A	rs972936312	G	A	a	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr19	7344338	7344339	chr19:7344339:C:T	rs10409131	C	T	c	Hoxd9_MA0913.1	0	1	-	7.021721738714695	6.073988015304235	GCCATTAAGT
chr19	7489605	7489606	chr19:7489606:T:G	chr19:7489606:T:G	T	G	T	Hoxd9_MA0913.1	11	0	-	0	0	.
chr19	7578341	7578342	chr19:7578342:G:T	rs7259351	G	T	T	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr19	7674174	7674175	chr19:7674175:T:C	rs79584858	T	C	T	Hoxd9_MA0913.1	24	0	+	0	0	.
chr19	7735374	7735375	chr19:7735375:T:G	rs73921549	T	G	t	Hoxd9_MA0913.1	5	1	-	8.505472621251258	5.070670849881889	ATAATAAAAA
chr19	7792597	7792598	chr19:7792598:G:A	rs149841238	G	A	g	Hoxd9_MA0913.1	1	1	-	7.021721738714695	6.673586110985671	GCCATTAAGT
chr19	7799761	7799762	chr19:7799762:C:G	rs56307084	C	G	c	Hoxd9_MA0913.1	18	0	-	0	0	.
chr19	7799767	7799768	chr19:7799768:T:C	rs4804822	T	C	t	Hoxd9_MA0913.1	12	0	-	0	0	.
chr19	7801505	7801506	chr19:7801506:C:G	rs79109097	C	G	g	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr19	7803164	7803165	chr19:7803165:C:T	rs192039199	C	T	-	Hoxd9_MA0913.1	21	0	+	0	0	.
chr19	7829754	7829755	chr19:7829755:C:G	rs151063055	C	G	C	Hoxd9_MA0913.1	25	0	-	0	0	.
chr19	7829761	7829762	chr19:7829762:T:C	rs530922550	T	C	T	Hoxd9_MA0913.1	18	0	-	0	0	.
chr19	7995535	7995536	chr19:7995536:T:C	rs1204494	T	C	C	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr19	8051008	8051009	chr19:8051009:T:G	rs113074461	T	G	T	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr19	8302148	8302149	chr19:8302149:T:C	rs250510	T	C	C	Hoxd9_MA0913.1	2	1	-	8.293678209511443	6.616219768053342	GCAATTAAAG
chr19	8302162	8302163	chr19:8302163:G:C	chr19:8302163:G:C	G	C	G	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr19	8309488	8309489	chr19:8309489:T:C	rs1050516740	T	C	T	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr19	8309522	8309523	chr19:8309523:C:T	rs3760680	C	T	T	Hoxd9_MA0913.1	29	0	+	0	0	.
chr19	8452273	8452274	chr19:8452274:C:T	rs637922	C	T	C	Hoxd9_MA0913.1	29	0	-	0	0	.
chr19	8514487	8514488	chr19:8514488:C:T	rs6603086	C	T	C	Hoxd9_MA0913.1	0	1	-	7.75646393805828	6.808730214647819	GCCATTAAAC
chr19	8655119	8655120	chr19:8655120:C:A	rs62121177	C	A	C	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr19	8821711	8821712	chr19:8821712:G:A	rs2967727	G	A	g	Hoxd9_MA0913.1	12	0	-	0	0	.
chr19	9053936	9053937	chr19:9053937:C:G	rs11668021	C	G	C	Hoxd9_MA0913.1	23	0	+	0	0	.
chr19	9055113	9055114	chr19:9055114:C:G	rs11085827	C	G	C	Hoxd9_MA0913.1	1	1	+	7.7715698337279715	4.679004821443258	ACAATAAAAC
chr19	9720507	9720508	chr19:9720508:A:G	rs2112837	A	G	G	Hoxd9_MA0913.1	13	0	+	0	0	.
chr19	10219652	10219653	chr19:10219653:C:T	rs73015114	C	T	T	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr19	10380180	10380181	chr19:10380181:A:G	rs12720219	A	G	A	Hoxd9_MA0913.1	22	0	+	0	0	.
chr19	10380183	10380184	chr19:10380184:G:T	rs1282974770	G	T	G	Hoxd9_MA0913.1	25	0	+	0	0	.
chr19	10501942	10501943	chr19:10501943:G:A	rs117524565	G	A	G	Hoxd9_MA0913.1	23	0	-	0	0	.
chr19	10501975	10501976	chr19:10501976:G:A	rs946802932	G	A	G	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr19	11093950	11093951	chr19:11093951:C:T	rs17242367	C	T	C	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr19	11096839	11096840	chr19:11096840:G:A	rs73015030	G	A	g	Hoxd9_MA0913.1	27	0	+	0	0	.
chr19	11166067	11166068	chr19:11166068:G:A	rs892112	G	A	A	Hoxd9_MA0913.1	13	0	+	0	0	.
chr19	11269535	11269536	chr19:11269536:T:C	rs4804158	T	C	C	Hoxd9_MA0913.1	23	0	-	0	0	.
chr19	11435447	11435448	chr19:11435448:G:A	rs17426435	G	A	G	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr19	11856956	11856957	chr19:11856957:C:T	rs530823816	C	T	c	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr19	12064516	12064517	chr19:12064517:G:A	rs138735761	G	A	G	Hoxd9_MA0913.1	25	0	+	0	0	.
chr19	12332595	12332596	chr19:12332596:T:C	rs563492651	T	C	T	Hoxd9_MA0913.1	7	1	-	7.306704197962459	0.4675597206081167	GCCATAAAGA
chr19	12507884	12507885	chr19:12507885:A:G	rs7255217	A	G	G	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr19	12552013	12552014	chr19:12552014:T:G	rs77538034	T	G	T	Hoxd9_MA0913.1	7	1	-	8.531537147691377	5.237690395972946	GTCATAAAAA
chr19	12669898	12669899	chr19:12669899:C:T	rs116778851	C	T	C	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr19	12796517	12796518	chr19:12796518:C:A	rs35718591	C	A	C	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr19	12937679	12937680	chr19:12937680:G:C	rs575387128	G	C	G	Hoxd9_MA0913.1	1	1	-	8.678133135028622	5.585568122743908	GCAATTAAAC
chr19	13181542	13181543	chr19:13181543:C:T	rs8100125	C	T	C	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr19	13261030	13261031	chr19:13261031:G:A	rs59926814	G	A	G	Hoxd9_MA0913.1	23	0	-	0	0	.
chr19	13328196	13328197	chr19:13328197:A:G	rs10404873	A	G	G	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr19	13328200	13328201	chr19:13328201:C:G	rs10404089	C	G	G	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr19	13335027	13335028	chr19:13335028:G:A	rs2035278	G	A	G	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr19	13618205	13618206	chr19:13618206:G:T	rs542932	G	T	G	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr19	13773840	13773841	chr19:13773841:G:A	rs1128028	G	A	A	Hoxd9_MA0913.1	1	1	-	8.323343304007485	7.97520767627846	CCAATAAAAA
chr19	13849747	13849748	chr19:13849748:T:C	rs7507168	T	C	T	Hoxd9_MA0913.1	2	1	-	8.505472621251258	6.8280141797931595	ATAATAAAAA
chr19	13951815	13951816	chr19:13951816:G:T	chr19:13951816:G:T	G	T	G	Hoxd9_MA0913.1	29	0	-	0	0	.
chr19	13951816	13951817	chr19:13951817:A:C	chr19:13951817:A:C	A	C	A	Hoxd9_MA0913.1	28	0	-	0	0	.
chr19	14300621	14300622	chr19:14300622:A:T	rs7251069	A	T	A	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr19	14305980	14305981	chr19:14305981:T:C	rs888876	T	C	C	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr19	14449566	14449567	chr19:14449567:T:A	rs3729531	T	A	T	Hoxd9_MA0913.1	12	0	-	0	0	.
chr19	14774987	14774988	chr19:14774988:T:A	rs57712673	T	A	T	Hoxd9_MA0913.1	20	0	-	0	0	.
chr19	14783789	14783790	chr19:14783790:T:C	rs11881545	T	C	T	Hoxd9_MA0913.1	19	0	-	0	0	.
chr19	14888551	14888552	chr19:14888552:T:G	rs10402978	T	G	t	Hoxd9_MA0913.1	7	1	-	8.323343304007485	5.029496552289054	CCAATAAAAA
chr19	15299850	15299851	chr19:15299851:G:C	rs192600628	G	C	G	Hoxd9_MA0913.1	27	0	-	0	0	.
chr19	15496696	15496697	chr19:15496697:A:G	rs8101201	A	G	A	Hoxd9_MA0913.1	19	0	+	0	0	.
chr19	15810522	15810523	chr19:15810523:C:T	rs143584327	C	T	C	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr19	15837374	15837375	chr19:15837375:C:T	rs138194013	C	T	C	Hoxd9_MA0913.1	2	1	+	7.306704197962459	1.7780293630820188	GCCATAAAGA
chr19	15869637	15869638	chr19:15869638:G:A	rs62106157	G	A	-	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr19	15869681	15869682	chr19:15869682:T:G	rs62106158	T	G	-	Hoxd9_MA0913.1	24	0	+	0	0	.
chr19	15926441	15926442	chr19:15926442:T:A	rs7252266	T	A	T	Hoxd9_MA0913.1	26	0	+	0	0	.
chr19	15926548	15926549	chr19:15926549:A:G	rs7249167	A	G	G	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr19	16060456	16060457	chr19:16060457:A:G	rs8103615	A	G	G	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr19	16069728	16069729	chr19:16069729:A:T	rs67269649	A	T	T	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr19	16079425	16079426	chr19:16079426:G:C	rs867725174	G	C	G	Hoxd9_MA0913.1	0	1	+	9.760171550280933	8.282172881897674	GCAATTAAAA
chr19	16183019	16183020	chr19:16183020:C:T	rs115680988	C	T	C	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr19	16197411	16197412	chr19:16197412:A:G	rs186616477	A	G	A	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr19	16293690	16293691	chr19:16293691:C:T	rs1004670052	C	T	C	Hoxd9_MA0913.1	10	0	+	0	0	.
chr19	16293709	16293710	chr19:16293710:C:T	rs454185	C	T	T	Hoxd9_MA0913.1	29	0	+	0	0	.
chr19	16303929	16303930	chr19:16303930:C:T	chr19:16303930:C:T	C	T	C	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr19	16334625	16334626	chr19:16334626:T:G	rs61380623	T	G	T	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr19	16382028	16382029	chr19:16382029:C:A	rs146271245	C	A	C	Hoxd9_MA0913.1	12	0	+	0	0	.
chr19	16382042	16382043	chr19:16382043:G:A	rs899819233	G	A	G	Hoxd9_MA0913.1	26	0	+	0	0	.
chr19	16848795	16848796	chr19:16848796:C:T	rs111981792	C	T	c	Hoxd9_MA0913.1	24	0	-	0	0	.
chr19	16982704	16982705	chr19:16982705:G:A	rs147449718	G	A	G	Hoxd9_MA0913.1	28	0	+	0	0	.
chr19	17062059	17062060	chr19:17062060:T:C	rs78134142	T	C	T	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr19	17191437	17191438	chr19:17191438:G:A	rs962917	G	A	G	Hoxd9_MA0913.1	17	0	-	0	0	.
chr19	17349972	17349973	chr19:17349973:T:C	rs6512186	T	C	t	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr19	17411993	17411994	chr19:17411994:G:A	rs74319012	G	A	G	Hoxd9_MA0913.1	15	0	-	0	0	.
chr19	17425294	17425295	chr19:17425295:G:C	rs1433246377	G	C	g	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr19	17591143	17591144	chr19:17591144:C:T	rs67113289	C	T	C	Hoxd9_MA0913.1	0	1	+	7.241304888755173	5.682160861185562	CCAATAAAAC
chr19	17718907	17718908	chr19:17718908:A:G	rs10405032	A	G	G	Hoxd9_MA0913.1	10	0	+	0	0	.
chr19	17850267	17850268	chr19:17850268:C:G	rs35563907	C	G	C	Hoxd9_MA0913.1	1	1	+	7.801678332738202	4.70911332045349	GCAATAAACA
chr19	17948934	17948935	chr19:17948935:A:G	rs12609274	A	G	A	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr19	18000326	18000327	chr19:18000327:G:A	rs7252141	G	A	G	Hoxd9_MA0913.1	29	0	+	0	0	.
chr19	18012240	18012241	chr19:18012241:G:C	rs73512449	G	C	G	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr19	18061075	18061076	chr19:18061076:A:G	rs383483	A	G	G	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr19	18065042	18065043	chr19:18065043:A:G	rs17884920	A	G	A	Hoxd9_MA0913.1	0	1	+	8.464302199141448	9.412035922551908	ATAATTAAAA
chr19	18659450	18659451	chr19:18659451:A:G	rs187671226	A	G	A	Hoxd9_MA0913.1	3	1	+	7.7715698337279715	5.943950893232866	ACAATAAAAC
chr19	18782307	18782308	chr19:18782308:G:A	rs76936388	G	A	G	Hoxd9_MA0913.1	0	1	+	9.453206344661718	8.505472621251258	GTAATAAAAA
chr19	18836586	18836587	chr19:18836587:C:T	rs11670952	C	T	t	Hoxd9_MA0913.1	11	0	-	0	0	.
chr19	18866566	18866567	chr19:18866567:T:A	chr19:18866567:T:A	T	A	T	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr19	18875835	18875836	chr19:18875836:T:C	rs73923175	T	C	t	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr19	19062746	19062747	chr19:19062747:C:A	rs55658345	C	A	C	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr19	19189151	19189152	chr19:19189152:C:A	rs12459686	C	A	C	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr19	19276546	19276547	chr19:19276547:C:T	rs2010506	C	T	C	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr19	19401847	19401848	chr19:19401848:A:T	rs10408596	A	T	A	Hoxd9_MA0913.1	8	1	+	7.4131794346509094	5.934848832621858	GCCATAAAAG
chr19	19461298	19461299	chr19:19461299:T:G	rs4808959	T	G	G	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr19	19671107	19671108	chr19:19671108:A:G	rs73006705	A	G	A	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr19	19764054	19764055	chr19:19764055:C:T	rs7247299	C	T	c	Hoxd9_MA0913.1	23	0	-	0	0	.
chr19	19817347	19817348	chr19:19817348:A:C	rs937721150	A	C	a	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr19	20079523	20079524	chr19:20079524:G:T	rs201879295	G	T	g	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr19	20079528	20079529	chr19:20079529:A:G	rs59445264	A	G	a	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr19	20281002	20281003	chr19:20281003:G:C	rs55820568	G	C	.	Hoxd9_MA0913.1	15	0	+	0	0	.
chr19	20926803	20926804	chr19:20926804:G:A	rs10422656	G	A	G	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr19	21092466	21092467	chr19:21092467:A:G	rs112812752	A	G	A	Hoxd9_MA0913.1	9	1	-	7.688740572647875	6.850514194533517	GCAGTTAAAT
chr19	21142946	21142947	chr19:21142947:C:T	rs62124917	C	T	C	Hoxd9_MA0913.1	15	0	-	0	0	.
chr19	21379645	21379646	chr19:21379646:C:G	rs17680605	C	G	.	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr19	21626210	21626211	chr19:21626211:C:T	rs12982185	C	T	.	Hoxd9_MA0913.1	13	0	-	0	0	.
chr19	21626241	21626242	chr19:21626242:G:A	rs12982643	G	A	.	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr19	21626635	21626636	chr19:21626636:T:G	rs12975884	T	G	.	Hoxd9_MA0913.1	26	0	+	0	0	.
chr19	22784099	22784100	chr19:22784100:C:A	rs7248586	C	A	.	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr19	23118052	23118053	chr19:23118053:T:G	rs6417215	T	G	-	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr19	23414649	23414650	chr19:23414650:T:C	rs621906	T	C	T	Hoxd9_MA0913.1	4	1	+	8.505472621251258	5.213338369476279	ATAATAAAAA
chr19	23507738	23507739	chr19:23507739:A:C	rs2364165	A	C	C	Hoxd9_MA0913.1	10	0	+	0	0	.
chr19	23525469	23525470	chr19:23525470:T:C	rs77075398	T	C	T	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr19	23556782	23556783	chr19:23556783:C:T	rs2195961	C	T	C	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr19	23685809	23685810	chr19:23685810:T:C	rs77391742	T	C	T	Hoxd9_MA0913.1	10	0	-	0	0	.
chr19	23748241	23748242	chr19:23748242:T:C	rs6511511	T	C	T	Hoxd9_MA0913.1	3	1	-	7.516695873490439	5.689076932995334	GCAATTAACT
chr19	23901616	23901617	chr19:23901617:T:G	rs6511674	T	G	t	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr19	23987002	23987003	chr19:23987003:C:G	rs76157865	C	G	C	Hoxd9_MA0913.1	15	0	+	0	0	.
chr19	24361799	24361800	chr19:24361800:G:A	rs113847235	G	A	.	Hoxd9_MA0913.1	25	0	+	0	0	.
chr19	24404473	24404474	chr19:24404474:A:C	rs8187223	A	C	.	Hoxd9_MA0913.1	0	1	+	8.853608248980283	8.323343304007485	ACAATAAAAA
chr19	27392413	27392414	chr19:27392414:C:G	rs62111084	C	G	.	Hoxd9_MA0913.1	16	0	-	0	0	.
chr19	27392422	27392423	chr19:27392423:T:G	rs113843226	T	G	.	Hoxd9_MA0913.1	7	1	-	8.32301137036169	5.029164618643261	GCAATAAATA
chr19	27658891	27658892	chr19:27658892:C:T	rs739775	C	T	.	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr19	27658897	27658898	chr19:27658898:G:A	rs739776	G	A	.	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr19	27671376	27671377	chr19:27671377:A:G	rs56256043	A	G	.	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr19	27671700	27671701	chr19:27671701:A:G	rs73014698	A	G	.	Hoxd9_MA0913.1	10	0	-	0	0	.
chr19	27672738	27672739	chr19:27672739:C:T	rs144028978	C	T	.	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr19	27678298	27678299	chr19:27678299:T:G	rs66504041	T	G	.	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr19	27680047	27680048	chr19:27680048:A:G	rs11669533	A	G	.	Hoxd9_MA0913.1	16	0	+	0	0	.
chr19	27736191	27736192	chr19:27736192:T:C	rs7246826	T	C	.	Hoxd9_MA0913.1	12	0	+	0	0	.
chr19	27767118	27767119	chr19:27767119:T:G	rs4805576	T	G	t	Hoxd9_MA0913.1	5	1	+	7.890768629900132	1.7102758991140732	ACCATTAAAA
chr19	27794279	27794280	chr19:27794280:A:C	chr19:27794280:A:C	A	C	a	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr19	27822761	27822762	chr19:27822762:A:T	rs113788092	A	T	a	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr19	27920715	27920716	chr19:27920716:G:T	rs9304854	G	T	T	Hoxd9_MA0913.1	1	1	-	8.853608248980283	6.433789872955025	ACAATAAAAA
chr19	27969355	27969356	chr19:27969356:T:C	rs8104912	T	C	C	Hoxd9_MA0913.1	16	0	+	0	0	.
chr19	28010049	28010050	chr19:28010050:C:T	rs10439137	C	T	T	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr19	28010415	28010416	chr19:28010416:C:T	rs10439141	C	T	T	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr19	28176475	28176476	chr19:28176476:C:T	rs7245994	C	T	C	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr19	28296648	28296649	chr19:28296649:A:T	rs894375576	A	T	A	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr19	28319460	28319461	chr19:28319461:G:C	rs12462278	G	C	C	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr19	28319550	28319551	chr19:28319551:C:G	rs2532048	C	G	G	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr19	28467343	28467344	chr19:28467344:T:C	rs2190832	T	C	T	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr19	28574656	28574657	chr19:28574657:T:A	rs75996104	T	A	T	Hoxd9_MA0913.1	21	0	+	0	0	.
chr19	28735896	28735897	chr19:28735897:A:C	rs2870525	A	C	.	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr19	28880225	28880226	chr19:28880226:A:G	rs56326629	A	G	G	Hoxd9_MA0913.1	20	0	-	0	0	.
chr19	28903158	28903159	chr19:28903159:G:A	rs34481423	G	A	T	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr19	29021513	29021514	chr19:29021514:C:G	rs62111234	C	G	C	Hoxd9_MA0913.1	29	0	-	0	0	.
chr19	29060754	29060755	chr19:29060755:G:T	rs7247156	G	T	g	Hoxd9_MA0913.1	14	0	-	0	0	.
chr19	29155948	29155949	chr19:29155949:A:G	rs4255891	A	G	G	Hoxd9_MA0913.1	28	0	-	0	0	.
chr19	29296484	29296485	chr19:29296485:G:A	rs79240659	G	A	G	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr19	29296523	29296524	chr19:29296524:A:G	rs10404352	A	G	G	Hoxd9_MA0913.1	22	0	+	0	0	.
chr19	29330216	29330217	chr19:29330217:G:A	rs10853798	G	A	G	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr19	29330238	29330239	chr19:29330239:C:A	rs10853799	C	A	A	Hoxd9_MA0913.1	18	0	+	0	0	.
chr19	29374013	29374014	chr19:29374014:T:A	rs79187580	T	A	T	Hoxd9_MA0913.1	16	0	+	0	0	.
chr19	29518704	29518705	chr19:29518705:G:A	rs10403632	G	A	A	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr19	29593208	29593209	chr19:29593209:A:G	rs12609881	A	G	A	Hoxd9_MA0913.1	3	1	+	8.60979621184233	6.782177271347225	ACAATAAAAT
chr19	29637765	29637766	chr19:29637766:G:A	rs148279099	G	A	G	Hoxd9_MA0913.1	0	1	+	8.371167929409406	7.423434205998946	GTAATAAAAC
chr19	29685565	29685566	chr19:29685566:A:T	rs113075544	A	T	A	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr19	29685570	29685571	chr19:29685571:C:T	rs78937835	C	T	C	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr19	29688244	29688245	chr19:29688245:G:A	rs78452794	G	A	G	Hoxd9_MA0913.1	29	0	-	0	0	.
chr19	29730546	29730547	chr19:29730547:T:C	rs10403744	T	C	C	Hoxd9_MA0913.1	18	0	+	0	0	.
chr19	29786003	29786004	chr19:29786004:G:A	rs10406613	G	A	G	Hoxd9_MA0913.1	17	0	+	0	0	.
chr19	29844214	29844215	chr19:29844215:G:C	chr19:29844215:G:C	G	C	G	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr19	29943381	29943382	chr19:29943382:T:C	rs750680	T	C	T	Hoxd9_MA0913.1	11	0	-	0	0	.
chr19	30349342	30349343	chr19:30349343:G:T	rs1433078	G	T	T	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr19	30447076	30447077	chr19:30447077:G:A	rs73924758	G	A	G	Hoxd9_MA0913.1	0	1	+	7.021721738714695	6.073988015304235	GCCATTAAGT
chr19	30449492	30449493	chr19:30449493:A:C	rs780106840	A	C	A	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr19	30449522	30449523	chr19:30449523:T:C	rs33432	T	C	C	Hoxd9_MA0913.1	27	0	+	0	0	.
chr19	30553117	30553118	chr19:30553118:A:G	rs6510167	A	G	G	Hoxd9_MA0913.1	18	0	-	0	0	.
chr19	30595279	30595280	chr19:30595280:G:A	rs551018097	G	A	G	Hoxd9_MA0913.1	18	0	-	0	0	.
chr19	30723698	30723699	chr19:30723699:C:T	rs16964560	C	T	c	Hoxd9_MA0913.1	21	0	-	0	0	.
chr19	30883446	30883447	chr19:30883447:T:C	rs1466298	T	C	C	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr19	30883460	30883461	chr19:30883461:G:A	rs1001085	G	A	G	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr19	30947683	30947684	chr19:30947684:C:G	rs12975419	C	G	G	Hoxd9_MA0913.1	0	1	-	7.3720090125411	5.8940103441578415	GCCATTAAAG
chr19	31071326	31071327	chr19:31071327:C:T	rs75353532	C	T	C	Hoxd9_MA0913.1	16	0	-	0	0	.
chr19	31212813	31212814	chr19:31212814:T:A	rs12974626	T	A	T	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr19	31329586	31329587	chr19:31329587:T:C	rs2867598	T	C	T	Hoxd9_MA0913.1	12	0	+	0	0	.
chr19	31449180	31449181	chr19:31449181:C:T	rs12975463	C	T	C	Hoxd9_MA0913.1	25	0	-	0	0	.
chr19	31477752	31477753	chr19:31477753:T:C	rs12981971	T	C	T	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr19	31500945	31500946	chr19:31500946:T:C	rs12973681	T	C	T	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr19	31511597	31511598	chr19:31511598:C:T	rs12459498	C	T	c	Hoxd9_MA0913.1	18	0	-	0	0	.
chr19	31586582	31586583	chr19:31586583:G:T	rs182421556	G	T	G	Hoxd9_MA0913.1	10	0	+	0	0	.
chr19	31720471	31720472	chr19:31720472:C:T	rs117945000	C	T	C	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr19	31987326	31987327	chr19:31987327:A:G	rs11879376	A	G	G	Hoxd9_MA0913.1	24	0	-	0	0	.
chr19	32095513	32095514	chr19:32095514:T:C	rs4804979	T	C	C	Hoxd9_MA0913.1	3	1	-	7.146334979680488	5.318716039185384	GCAATAAAGC
chr19	32104033	32104034	chr19:32104034:A:T	rs6510223	A	T	T	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr19	32106273	32106274	chr19:32106274:A:G	rs1529740	A	G	A	Hoxd9_MA0913.1	12	0	-	0	0	.
chr19	32171994	32171995	chr19:32171995:A:G	rs73927518	A	G	a	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr19	32242037	32242038	chr19:32242038:A:G	rs55827902	A	G	A	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr19	32373658	32373659	chr19:32373659:G:A	rs2868083	G	A	A	Hoxd9_MA0913.1	21	0	+	0	0	.
chr19	32565687	32565688	chr19:32565688:T:C	rs7259049	T	C	T	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr19	32565688	32565689	chr19:32565689:G:A	rs117163825	G	A	G	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr19	32693462	32693463	chr19:32693463:A:G	rs12611419	A	G	A	Hoxd9_MA0913.1	14	0	-	0	0	.
chr19	32702255	32702256	chr19:32702256:G:C	rs113282417	G	C	G	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr19	32735322	32735323	chr19:32735323:T:C	rs28787932	T	C	T	Hoxd9_MA0913.1	8	1	-	7.241304888755173	5.668336311297231	CCAATAAAAC
chr19	32842248	32842249	chr19:32842249:G:A	rs2287881	G	A	G	Hoxd9_MA0913.1	18	0	+	0	0	.
chr19	32872480	32872481	chr19:32872481:T:A	rs2868195	T	A	A	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr19	32873482	32873483	chr19:32873483:G:C	rs74646163	G	C	G	Hoxd9_MA0913.1	0	1	+	7.7976343601680895	6.319635691784832	GCCATAAAAC
chr19	32875922	32875923	chr19:32875923:C:G	rs61743316	C	G	C	Hoxd9_MA0913.1	26	0	-	0	0	.
chr19	32896866	32896867	chr19:32896867:T:A	rs58634595	T	A	T	Hoxd9_MA0913.1	29	0	+	0	0	.
chr19	32910927	32910928	chr19:32910928:T:G	rs11084683	T	G	T	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr19	32915184	32915185	chr19:32915185:G:A	rs3764632	G	A	G	Hoxd9_MA0913.1	19	0	+	0	0	.
chr19	32920232	32920233	chr19:32920233:T:G	rs10418164	T	G	T	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr19	33024457	33024458	chr19:33024458:T:C	rs6510327	T	C	T	Hoxd9_MA0913.1	4	1	+	8.853608248980283	5.561473997205303	ACAATAAAAA
chr19	33252091	33252092	chr19:33252092:T:G	rs78476878	T	G	G	Hoxd9_MA0913.1	8	1	-	8.464302199141448	6.4646385594889075	ATAATTAAAA
chr19	33276661	33276662	chr19:33276662:C:T	rs889105	C	T	C	Hoxd9_MA0913.1	1	1	+	8.853608248980283	8.505472621251258	ACAATAAAAA
chr19	33362353	33362354	chr19:33362354:C:T	rs56187503	C	T	C	Hoxd9_MA0913.1	12	0	-	0	0	.
chr19	33426984	33426985	chr19:33426985:T:C	rs563423118	T	C	T	Hoxd9_MA0913.1	3	1	-	7.7976343601680895	5.970015419672985	GCCATAAAAC
chr19	33426996	33426997	chr19:33426997:G:A	rs78293394	G	A	G	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr19	33427007	33427008	chr19:33427008:G:A	rs113501180	G	A	G	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr19	33434681	33434682	chr19:33434682:C:T	rs11084734	C	T	C	Hoxd9_MA0913.1	11	0	+	0	0	.
chr19	33441834	33441835	chr19:33441835:C:T	rs117684449	C	T	C	Hoxd9_MA0913.1	25	0	-	0	0	.
chr19	33453980	33453981	chr19:33453981:G:A	rs6417177	G	A	G	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr19	33464001	33464002	chr19:33464002:G:A	rs575076607	G	A	G	Hoxd9_MA0913.1	16	0	-	0	0	.
chr19	33550611	33550612	chr19:33550612:T:A	rs12976330	T	A	T	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr19	33557401	33557402	chr19:33557402:C:T	rs2278260	C	T	C	Hoxd9_MA0913.1	13	0	-	0	0	.
chr19	33693294	33693295	chr19:33693295:C:T	rs112596066	C	T	C	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr19	33707928	33707929	chr19:33707929:G:A	rs4805927	G	A	G	Hoxd9_MA0913.1	13	0	-	0	0	.
chr19	33832117	33832118	chr19:33832118:G:A	rs55903740	G	A	G	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr19	33867882	33867883	chr19:33867883:T:C	rs11879262	T	C	T	Hoxd9_MA0913.1	26	0	-	0	0	.
chr19	33876673	33876674	chr19:33876674:T:C	rs56239079	T	C	T	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr19	33877791	33877792	chr19:33877792:G:T	rs7249257	G	T	G	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr19	33895889	33895890	chr19:33895890:C:T	rs1108324	C	T	C	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr19	33936820	33936821	chr19:33936821:A:G	rs4805064	A	G	A	Hoxd9_MA0913.1	28	0	+	0	0	.
chr19	34168495	34168496	chr19:34168496:C:T	rs35699082	C	T	C	Hoxd9_MA0913.1	17	0	-	0	0	.
chr19	34496474	34496475	chr19:34496475:A:G	rs2910415	A	G	A	Hoxd9_MA0913.1	9	1	-	8.635860738282448	7.7976343601680895	GCCATAAAAT
chr19	34640005	34640006	chr19:34640006:T:C	rs11672207	T	C	T	Hoxd9_MA0913.1	15	0	-	0	0	.
chr19	34735512	34735513	chr19:34735513:T:C	rs73589593	T	C	T	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr19	34737178	34737179	chr19:34737179:A:C	rs8106730	A	C	C	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr19	34967662	34967663	chr19:34967663:C:A	rs2651073	C	A	G	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr19	34967662	34967663	chr19:34967663:C:G	chr19:34967663:C:G	C	G	G	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr19	34992920	34992921	chr19:34992921:T:G	rs6510463	T	G	T	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr19	35067796	35067797	chr19:35067797:T:A	rs113031406	T	A	T	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr19	35152809	35152810	chr19:35152810:C:T	rs2451994	C	T	T	Hoxd9_MA0913.1	26	0	-	0	0	.
chr19	35152845	35152846	chr19:35152846:A:T	rs2516281	A	T	T	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr19	35165279	35165280	chr19:35165280:G:A	rs1688008	G	A	A	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr19	35186599	35186600	chr19:35186600:A:C	rs4806106	A	C	a	Hoxd9_MA0913.1	24	0	-	0	0	.
chr19	35210361	35210362	chr19:35210362:A:G	rs1688014	A	G	A	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr19	35221140	35221141	chr19:35221141:C:T	rs12463330	C	T	C	Hoxd9_MA0913.1	29	0	-	0	0	.
chr19	35221168	35221169	chr19:35221169:G:A	rs565818	G	A	G	Hoxd9_MA0913.1	1	1	-	8.32301137036169	7.974875742632667	GCAATAAATA
chr19	35377129	35377130	chr19:35377130:G:A	rs12977409	G	A	G	Hoxd9_MA0913.1	20	0	-	0	0	.
chr19	35901419	35901420	chr19:35901420:G:A	rs76369906	G	A	G	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr19	35931014	35931015	chr19:35931015:T:G	rs58504183	T	G	T	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr19	36169457	36169458	chr19:36169458:T:C	rs886125447	T	C	t	Hoxd9_MA0913.1	18	0	+	0	0	.
chr19	36240521	36240522	chr19:36240522:A:G	rs4806295	A	G	-	Hoxd9_MA0913.1	17	0	-	0	0	.
chr19	36489958	36489959	chr19:36489959:C:T	rs142207550	C	T	C	Hoxd9_MA0913.1	11	0	-	0	0	.
chr19	36490067	36490068	chr19:36490068:T:A	rs146765954	T	A	T	Hoxd9_MA0913.1	23	0	-	0	0	.
chr19	36490068	36490069	chr19:36490069:C:A	rs140234261	C	A	C	Hoxd9_MA0913.1	22	0	-	0	0	.
chr19	36707350	36707351	chr19:36707351:G:T	rs3108570	G	T	T	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr19	37173356	37173357	chr19:37173357:G:A	rs112503901	G	A	.	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr19	37815980	37815981	chr19:37815981:A:G	rs8104076	A	G	a	Hoxd9_MA0913.1	4	1	-	8.334848631621252	5.042714379846271	GCAATAAAAG
chr19	37872240	37872241	chr19:37872241:G:A	rs10427125	G	A	G	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr19	37907648	37907649	chr19:37907649:C:G	rs759994652	C	G	C	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr19	37945574	37945575	chr19:37945575:A:G	rs6508753	A	G	N	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr19	37954345	37954346	chr19:37954346:G:A	rs7258011	G	A	g	Hoxd9_MA0913.1	24	0	-	0	0	.
chr19	37959858	37959859	chr19:37959859:T:C	rs353421	T	C	T	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr19	38048158	38048159	chr19:38048159:A:G	rs1654339	A	G	A	Hoxd9_MA0913.1	7	1	+	8.812437826870472	1.9732933495161296	ACAATTAAAA
chr19	38050105	38050106	chr19:38050106:G:A	rs1654341	G	A	G	Hoxd9_MA0913.1	29	0	+	0	0	.
chr19	38053745	38053746	chr19:38053746:G:T	rs8106776	G	T	t	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr19	38250284	38250285	chr19:38250285:C:T	rs12981216	C	T	C	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr19	38431546	38431547	chr19:38431547:C:T	rs1541919	C	T	C	Hoxd9_MA0913.1	17	0	+	0	0	.
chr19	38582510	38582511	chr19:38582511:C:T	rs6508809	C	T	C	Hoxd9_MA0913.1	27	0	+	0	0	.
chr19	38655211	38655212	chr19:38655212:A:G	rs73933039	A	G	A	Hoxd9_MA0913.1	3	1	+	7.401342173391351	5.573723232896246	GCCATAAATA
chr19	38659558	38659559	chr19:38659559:A:G	rs7351086	A	G	a	Hoxd9_MA0913.1	11	0	+	0	0	.
chr19	38674421	38674422	chr19:38674422:G:T	rs35691365	G	T	G	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr19	38684275	38684276	chr19:38684276:G:A	rs77129448	G	A	G	Hoxd9_MA0913.1	28	0	+	0	0	.
chr19	38941772	38941773	chr19:38941773:T:G	rs7257007	T	G	g	Hoxd9_MA0913.1	14	0	-	0	0	.
chr19	38980720	38980721	chr19:38980721:C:T	chr19:38980721:C:T	C	T	C	Hoxd9_MA0913.1	21	0	+	0	0	.
chr19	39000904	39000905	chr19:39000905:A:T	rs2081994	A	T	T	Hoxd9_MA0913.1	14	0	-	0	0	.
chr19	39000917	39000918	chr19:39000918:G:A	rs2081995	G	A	A	Hoxd9_MA0913.1	1	1	-	8.60979621184233	8.261660584113304	ACAATAAAAT
chr19	39030964	39030965	chr19:39030965:A:G	rs150422002	A	G	A	Hoxd9_MA0913.1	3	1	+	7.4016741070371435	5.57405516654204	CCCATAAAAA
chr19	39033167	39033168	chr19:39033168:C:G	rs184576548	C	G	C	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr19	39033197	39033198	chr19:39033198:T:G	chr19:39033198:T:G	T	G	T	Hoxd9_MA0913.1	26	0	+	0	0	.
chr19	39391321	39391322	chr19:39391322:G:T	rs746883152	G	T	A	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr19	39391332	39391333	chr19:39391333:A:C	chr19:39391333:A:C	A	C	A	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr19	39766588	39766589	chr19:39766589:T:C	rs3810387	T	C	C	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr19	39959000	39959001	chr19:39959001:A:G	rs234343	A	G	.	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr19	40070821	40070822	chr19:40070822:T:C	rs337780	T	C	C	Hoxd9_MA0913.1	9	1	-	8.531537147691377	7.065043806921886	GTCATAAAAA
chr19	40219974	40219975	chr19:40219975:G:T	rs114691974	G	T	G	Hoxd9_MA0913.1	0	1	+	7.760507910628393	4.723365214675523	GCAATTAACA
chr19	40220000	40220001	chr19:40220001:G:A	rs141294839	G	A	G	Hoxd9_MA0913.1	26	0	+	0	0	.
chr19	40220001	40220002	chr19:40220002:T:A	rs150802937	T	A	T	Hoxd9_MA0913.1	27	0	+	0	0	.
chr19	40426256	40426257	chr19:40426257:A:C	chr19:40426257:A:C	A	C	A	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr19	40699259	40699260	chr19:40699260:T:C	rs2561535	T	C	C	Hoxd9_MA0913.1	13	0	-	0	0	.
chr19	40724240	40724241	chr19:40724241:G:A	rs4802086	G	A	A	Hoxd9_MA0913.1	8	1	+	7.062892160824505	8.635860738282448	GCCATAAAGT
chr19	40875404	40875405	chr19:40875405:A:G	rs73048976	A	G	a	Hoxd9_MA0913.1	26	0	+	0	0	.
chr19	41358603	41358604	chr19:41358604:T:A	rs1982072	T	A	A	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr19	41380549	41380550	chr19:41380550:T:G	rs13345590	T	G	G	Hoxd9_MA0913.1	6	1	-	7.516695873490439	3.0421190108222333	GCAATTAACT
chr19	41553018	41553019	chr19:41553019:C:T	rs10421574	C	T	-	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr19	41555185	41555186	chr19:41555186:A:G	rs11881771	A	G	-	Hoxd9_MA0913.1	1	1	-	8.505472621251258	8.853608248980283	ATAATAAAAA
chr19	41648996	41648997	chr19:41648997:T:G	rs2016082	T	G	T	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr19	41657152	41657153	chr19:41657153:A:T	rs192995734	A	T	A	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr19	41802393	41802394	chr19:41802394:G:A	rs7251336	G	A	g	Hoxd9_MA0913.1	11	0	-	0	0	.
chr19	42214183	42214184	chr19:42214184:A:G	rs112106426	A	G	G	Hoxd9_MA0913.1	28	0	+	0	0	.
chr19	42760276	42760277	chr19:42760277:A:T	rs4277442	A	T	a	Hoxd9_MA0913.1	2	1	+	6.891684616643326	0.44134058479254445	GCAGTAAAAC
chr19	42760290	42760291	chr19:42760291:A:T	rs4558509	A	T	N	Hoxd9_MA0913.1	16	0	+	0	0	.
chr19	42931714	42931715	chr19:42931715:G:C	rs1429058406	G	C	.	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr19	43022578	43022579	chr19:43022579:A:C	rs4029163	A	C	.	Hoxd9_MA0913.1	23	0	+	0	0	.
chr19	43042659	43042660	chr19:43042660:A:G	rs149840191	A	G	.	Hoxd9_MA0913.1	19	0	+	0	0	.
chr19	43127169	43127170	chr19:43127170:C:T	rs10407242	C	T	.	Hoxd9_MA0913.1	19	0	-	0	0	.
chr19	43265680	43265681	chr19:43265681:G:A	rs4803591	G	A	.	Hoxd9_MA0913.1	19	0	+	0	0	.
chr19	43299962	43299963	chr19:43299963:A:G	rs2098020	A	G	.	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr19	43362945	43362946	chr19:43362946:G:T	rs28460459	G	T	N	Hoxd9_MA0913.1	2	1	-	8.287725110553424	9.209394307523764	GTCATAAAAT
chr19	43397159	43397160	chr19:43397160:C:T	rs8112496	C	T	c	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr19	43455489	43455490	chr19:43455490:C:G	rs186304190	C	G	C	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr19	43785860	43785861	chr19:43785861:T:A	rs4803658	T	A	A	Hoxd9_MA0913.1	9	1	+	8.287725110553424	8.531537147691377	GTCATAAAAT
chr19	43794835	43794836	chr19:43794836:A:G	rs11083724	A	G	A	Hoxd9_MA0913.1	18	0	-	0	0	.
chr19	43809991	43809992	chr19:43809992:G:T	rs111397027	G	T	G	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr19	43810000	43810001	chr19:43810001:T:C	rs80139960	T	C	T	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr19	43820868	43820869	chr19:43820869:A:G	rs116858228	A	G	A	Hoxd9_MA0913.1	2	1	+	7.557866295600249	5.880407854142151	GCAATAAACT
chr19	43827817	43827818	chr19:43827818:C:G	rs10500287	C	G	C	Hoxd9_MA0913.1	13	0	+	0	0	.
chr19	43934770	43934771	chr19:43934771:G:A	rs377931	G	A	A	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr19	43935751	43935752	chr19:43935752:G:A	rs183685938	G	A	G	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr19	43935784	43935785	chr19:43935785:C:A	rs8100682	C	A	C	Hoxd9_MA0913.1	16	0	+	0	0	.
chr19	44006188	44006189	chr19:44006189:C:T	rs8105571	C	T	C	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr19	44113752	44113753	chr19:44113753:T:G	rs143601567	T	G	.	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr19	44291137	44291138	chr19:44291138:C:T	rs2609874	C	T	T	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr19	44297381	44297382	chr19:44297382:G:T	rs77566333	G	T	G	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr19	44346400	44346401	chr19:44346401:G:A	rs2356881	G	A	G	Hoxd9_MA0913.1	29	0	+	0	0	.
chr19	44449007	44449008	chr19:44449008:A:G	rs73935677	A	G	A	Hoxd9_MA0913.1	27	0	+	0	0	.
chr19	44562796	44562797	chr19:44562797:A:G	rs12459712	A	G	G	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr19	44847392	44847393	chr19:44847393:C:T	chr19:44847393:C:T	C	T	C	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr19	45174056	45174057	chr19:45174057:T:C	rs12460041	T	C	C	Hoxd9_MA0913.1	13	0	+	0	0	.
chr19	45468216	45468217	chr19:45468217:C:T	rs1385785554	C	T	C	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr19	45544380	45544381	chr19:45544381:G:A	rs9789254	G	A	G	Hoxd9_MA0913.1	24	0	+	0	0	.
chr19	45643010	45643011	chr19:45643011:A:G	rs73050374	A	G	A	Hoxd9_MA0913.1	28	0	-	0	0	.
chr19	45881105	45881106	chr19:45881106:G:A	rs531317048	G	A	G	Hoxd9_MA0913.1	22	0	-	0	0	.
chr19	45920605	45920606	chr19:45920606:C:A	rs7252643	C	A	C	Hoxd9_MA0913.1	12	0	+	0	0	.
chr19	45920616	45920617	chr19:45920617:T:A	rs113333031	T	A	T	Hoxd9_MA0913.1	23	0	+	0	0	.
chr19	46069900	46069901	chr19:46069901:T:C	rs12459973	T	C	t	Hoxd9_MA0913.1	14	0	+	0	0	.
chr19	46184597	46184598	chr19:46184598:A:G	rs4802293	A	G	a	Hoxd9_MA0913.1	4	1	-	8.879672775420401	5.5875385236454225	GCCATAAAAA
chr19	46427443	46427444	chr19:46427444:A:G	rs406601	A	G	G	Hoxd9_MA0913.1	16	0	+	0	0	.
chr19	46434666	46434667	chr19:46434667:C:T	rs595669	C	T	C	Hoxd9_MA0913.1	29	0	+	0	0	.
chr19	46570561	46570562	chr19:46570562:C:T	rs8101563	C	T	T	Hoxd9_MA0913.1	1	1	+	7.688740572647875	7.340604944918851	GCAGTTAAAT
chr19	46618487	46618488	chr19:46618488:A:G	rs9304662	A	G	G	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr19	46618609	46618610	chr19:46618610:T:C	rs4803985	T	C	T	Hoxd9_MA0913.1	23	0	-	0	0	.
chr19	46670947	46670948	chr19:46670948:A:G	rs314658	A	G	A	Hoxd9_MA0913.1	10	0	-	0	0	.
chr19	46670954	46670955	chr19:46670955:T:C	rs74354969	T	C	T	Hoxd9_MA0913.1	3	1	-	7.401342173391351	5.573723232896246	GCCATAAATA
chr19	46829946	46829947	chr19:46829947:G:A	rs312181	G	A	A	Hoxd9_MA0913.1	28	0	+	0	0	.
chr19	46856748	46856749	chr19:46856749:C:T	rs188438219	C	T	C	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr19	46856793	46856794	chr19:46856794:C:T	rs74348028	C	T	C	Hoxd9_MA0913.1	27	0	+	0	0	.
chr19	46875714	46875715	chr19:46875715:A:C	rs10408213	A	C	A	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr19	46875756	46875757	chr19:46875757:G:A	rs8103985	G	A	G	Hoxd9_MA0913.1	23	0	+	0	0	.
chr19	46951561	46951562	chr19:46951562:T:C	rs77138297	T	C	T	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr19	46985820	46985821	chr19:46985821:C:G	rs10500296	C	G	C	Hoxd9_MA0913.1	1	1	+	7.760507910628393	4.667942898343679	GCAATTAACA
chr19	46997504	46997505	chr19:46997505:G:A	rs17716371	G	A	g	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr19	47041820	47041821	chr19:47041821:A:T	rs77610969	A	T	a	Hoxd9_MA0913.1	13	0	-	0	0	.
chr19	47041827	47041828	chr19:47041828:T:A	rs12608513	T	A	A	Hoxd9_MA0913.1	6	1	-	8.282172881897674	5.858852934363689	CCAATTAAAA
chr19	47047840	47047841	chr19:47047841:G:A	rs76002066	G	A	G	Hoxd9_MA0913.1	0	1	+	8.490366725581566	7.542633002171106	GTCATTAAAA
chr19	47047869	47047870	chr19:47047870:A:C	rs991693260	A	C	A	Hoxd9_MA0913.1	29	0	+	0	0	.
chr19	47095315	47095316	chr19:47095316:C:T	rs1363804126	C	T	C	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr19	47113383	47113384	chr19:47113384:T:A	rs117228623	T	A	T	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr19	47113413	47113414	chr19:47113414:A:G	chr19:47113414:A:G	A	G	A	Hoxd9_MA0913.1	14	0	+	0	0	.
chr19	47176822	47176823	chr19:47176823:A:G	rs116303596	A	G	A	Hoxd9_MA0913.1	22	0	-	0	0	.
chr19	47281391	47281392	chr19:47281392:T:C	rs8107528	T	C	t	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr19	47296150	47296151	chr19:47296151:C:T	rs7248529	C	T	T	Hoxd9_MA0913.1	14	0	+	0	0	.
chr19	47296162	47296163	chr19:47296163:G:A	rs7248747	G	A	G	Hoxd9_MA0913.1	26	0	+	0	0	.
chr19	47518031	47518032	chr19:47518032:A:T	rs830135	A	T	T	Hoxd9_MA0913.1	10	0	-	0	0	.
chr19	47598778	47598779	chr19:47598779:G:C	rs73557485	G	C	G	Hoxd9_MA0913.1	21	0	+	0	0	.
chr19	47678749	47678750	chr19:47678750:A:G	rs181129723	A	G	A	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr19	47714681	47714682	chr19:47714682:C:T	rs2914442	C	T	T	Hoxd9_MA0913.1	28	0	-	0	0	.
chr19	47714687	47714688	chr19:47714688:A:C	rs6509334	A	C	A	Hoxd9_MA0913.1	22	0	-	0	0	.
chr19	47723382	47723383	chr19:47723383:C:T	rs113974662	C	T	C	Hoxd9_MA0913.1	25	0	+	0	0	.
chr19	47868937	47868938	chr19:47868938:C:T	rs182420	C	T	c	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr19	47874261	47874262	chr19:47874262:C:T	rs4149452	C	T	C	Hoxd9_MA0913.1	23	0	+	0	0	.
chr19	47894320	47894321	chr19:47894321:G:A	rs139827833	G	A	g	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr19	47898635	47898636	chr19:47898636:G:A	rs2637125	G	A	G	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr19	47967408	47967409	chr19:47967409:T:C	rs143157562	T	C	t	Hoxd9_MA0913.1	4	1	+	8.879672775420401	5.5875385236454225	GCCATAAAAA
chr19	47967422	47967423	chr19:47967423:A:G	rs77735102	A	G	a	Hoxd9_MA0913.1	18	0	+	0	0	.
chr19	48060276	48060277	chr19:48060277:A:G	rs1366444	A	G	G	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr19	48099129	48099130	chr19:48099130:C:T	rs251674	C	T	-	Hoxd9_MA0913.1	22	0	+	0	0	.
chr19	48110416	48110417	chr19:48110417:C:T	rs114394391	C	T	C	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr19	48148811	48148812	chr19:48148812:T:C	rs3730920	T	C	T	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr19	48314635	48314636	chr19:48314636:A:G	rs249370	A	G	a	Hoxd9_MA0913.1	3	1	+	8.334848631621252	6.507229691126146	GCAATAAAAG
chr19	48487863	48487864	chr19:48487864:C:T	rs77500809	C	T	C	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr19	48553987	48553988	chr19:48553988:G:A	rs558941098	G	A	g	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr19	48579148	48579149	chr19:48579149:A:T	rs8108904	A	T	T	Hoxd9_MA0913.1	10	0	-	0	0	.
chr19	48645030	48645031	chr19:48645031:C:T	rs1361148521	C	T	C	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr19	48705720	48705721	chr19:48705721:A:G	rs632111	A	G	A	Hoxd9_MA0913.1	22	0	-	0	0	.
chr19	48705752	48705753	chr19:48705753:T:C	rs503279	T	C	C	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr19	48793396	48793397	chr19:48793397:C:T	rs684959	C	T	C	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr19	48906933	48906934	chr19:48906934:G:T	rs4802522	G	T	A	Hoxd9_MA0913.1	15	0	+	0	0	.
chr19	49115386	49115387	chr19:49115387:A:G	rs375722946	A	G	a	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr19	49272509	49272510	chr19:49272510:T:C	rs678052	T	C	C	Hoxd9_MA0913.1	27	0	+	0	0	.
chr19	49272572	49272573	chr19:49272573:A:G	rs12977180	A	G	A	Hoxd9_MA0913.1	2	1	+	8.60979621184233	6.93233777038423	ACAATAAAAT
chr19	49295761	49295762	chr19:49295762:G:A	rs77534327	G	A	G	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr19	49495069	49495070	chr19:49495070:C:T	rs113010433	C	T	c	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr19	49495070	49495071	chr19:49495071:G:A	rs141121779	G	A	c	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr19	49818600	49818601	chr19:49818601:G:A	rs77400039	G	A	G	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr19	49934605	49934606	chr19:49934606:C:T	rs58316270	C	T	-	Hoxd9_MA0913.1	24	0	+	0	0	.
chr19	50191974	50191975	chr19:50191975:T:A	rs590087	T	A	T	Hoxd9_MA0913.1	11	0	+	0	0	.
chr19	50346801	50346802	chr19:50346802:A:G	rs75080635	A	G	A	Hoxd9_MA0913.1	16	0	-	0	0	.
chr19	50635721	50635722	chr19:50635722:C:T	rs4801842	C	T	T	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr19	50851140	50851141	chr19:50851141:G:A	rs11665748	G	A	A	Hoxd9_MA0913.1	19	0	+	0	0	.
chr19	50860983	50860984	chr19:50860984:T:C	rs4802755	T	C	t	Hoxd9_MA0913.1	7	1	-	8.323343304007485	1.4841988266531423	CCAATAAAAA
chr19	50889861	50889862	chr19:50889862:A:G	rs1354774	A	G	a	Hoxd9_MA0913.1	1	1	-	7.636425730065822	7.984561357794846	GTAATAAAGT
chr19	50926702	50926703	chr19:50926703:T:C	rs8100471	T	C	c	Hoxd9_MA0913.1	24	0	-	0	0	.
chr19	50928737	50928738	chr19:50928738:G:A	rs115824979	G	A	g	Hoxd9_MA0913.1	28	0	-	0	0	.
chr19	50932479	50932480	chr19:50932480:C:T	rs1701906	C	T	C	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr19	51045123	51045124	chr19:51045124:G:A	rs1162614115	G	A	G	Hoxd9_MA0913.1	29	0	-	0	0	.
chr19	51074714	51074715	chr19:51074715:G:A	rs189227889	G	A	G	Hoxd9_MA0913.1	25	0	+	0	0	.
chr19	51139593	51139594	chr19:51139594:A:G	rs75292199	A	G	-	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr19	51194707	51194708	chr19:51194708:C:G	chr19:51194708:C:G	C	G	-	Hoxd9_MA0913.1	10	0	-	0	0	.
chr19	51331496	51331497	chr19:51331497:G:A	rs4802782	G	A	A	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr19	51350887	51350888	chr19:51350888:A:G	chr19:51350888:A:G	A	G	A	Hoxd9_MA0913.1	6	1	+	7.401342173391351	0.5859215056120096	GCCATAAATA
chr19	51394137	51394138	chr19:51394138:T:G	rs10419880	T	G	T	Hoxd9_MA0913.1	3	1	-	8.334848631621252	3.8686179612211946	GCAATAAAAG
chr19	51527907	51527908	chr19:51527908:A:G	rs897783	A	G	a	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr19	51619940	51619941	chr19:51619941:A:G	rs73050880	A	G	A	Hoxd9_MA0913.1	22	0	+	0	0	.
chr19	51659802	51659803	chr19:51659803:A:G	rs7248908	A	G	G	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr19	51662566	51662567	chr19:51662567:A:G	rs3931151	A	G	a	Hoxd9_MA0913.1	16	0	+	0	0	.
chr19	51677467	51677468	chr19:51677468:G:A	rs7254881	G	A	A	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr19	51822647	51822648	chr19:51822648:C:T	rs79100666	C	T	C	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr19	52316792	52316793	chr19:52316793:C:T	rs7249338	C	T	T	Hoxd9_MA0913.1	22	0	-	0	0	.
chr19	52501753	52501754	chr19:52501754:G:A	rs10410156	G	A	G	Hoxd9_MA0913.1	18	0	-	0	0	.
chr19	52501753	52501754	chr19:52501754:G:T	chr19:52501754:G:T	G	T	G	Hoxd9_MA0913.1	18	0	-	0	0	.
chr19	52580089	52580090	chr19:52580090:T:C	rs150792036	T	C	N	Hoxd9_MA0913.1	28	0	-	0	0	.
chr19	52584748	52584749	chr19:52584749:T:C	rs564612	T	C	t	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr19	52602293	52602294	chr19:52602294:A:G	rs329973	A	G	N	Hoxd9_MA0913.1	20	0	+	0	0	.
chr19	52686182	52686183	chr19:52686183:T:G	rs2869088	T	G	N	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr19	52821925	52821926	chr19:52821926:A:T	rs541466642	A	T	-	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr19	52821944	52821945	chr19:52821945:T:C	rs113506688	T	C	t	Hoxd9_MA0913.1	17	0	+	0	0	.
chr19	52885758	52885759	chr19:52885759:A:C	rs34101597	A	C	a	Hoxd9_MA0913.1	19	0	+	0	0	.
chr19	53223721	53223722	chr19:53223722:C:T	rs10425196	C	T	C	Hoxd9_MA0913.1	16	0	+	0	0	.
chr19	53572335	53572336	chr19:53572336:A:G	rs16985046	A	G	A	Hoxd9_MA0913.1	8	1	-	7.360171751281539	6.838838713658051	GCCATTAATA
chr19	53761552	53761553	chr19:53761553:C:T	rs611852	C	T	C	Hoxd9_MA0913.1	28	0	-	0	0	.
chr19	53877479	53877480	chr19:53877480:G:A	rs144472591	G	A	G	Hoxd9_MA0913.1	14	0	-	0	0	.
chr19	53877483	53877484	chr19:53877484:A:G	rs10413674	A	G	a	Hoxd9_MA0913.1	10	0	-	0	0	.
chr19	54158304	54158305	chr19:54158305:T:C	rs35089861	T	C	C	Hoxd9_MA0913.1	14	0	-	0	0	.
chr19	54205508	54205509	chr19:54205509:A:G	rs12982851	A	G	G	Hoxd9_MA0913.1	22	0	-	0	0	.
chr19	54205510	54205511	chr19:54205511:G:A	rs12983496	G	A	G	Hoxd9_MA0913.1	20	0	-	0	0	.
chr19	54224866	54224867	chr19:54224867:G:A	rs56307620	G	A	g	Hoxd9_MA0913.1	0	1	+	8.838502353310592	7.890768629900132	GCCATTAAAA
chr19	54224894	54224895	chr19:54224895:A:G	rs3859534	A	G	N	Hoxd9_MA0913.1	28	0	+	0	0	.
chr19	54607108	54607109	chr19:54607109:T:C	rs112038446	T	C	c	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr19	54607111	54607112	chr19:54607112:C:T	rs113585839	C	T	c	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr19	54653562	54653563	chr19:54653563:G:A	rs112506936	G	A	G	Hoxd9_MA0913.1	0	1	+	9.209394307523764	8.261660584113304	GTAATAAAAT
chr19	54655270	54655271	chr19:54655271:G:A	rs4806798	G	A	A	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr19	54730468	54730469	chr19:54730469:T:G	rs35469929	T	G	.	Hoxd9_MA0913.1	29	0	-	0	0	.
chr19	54776371	54776372	chr19:54776372:T:G	rs681436	T	G	.	Hoxd9_MA0913.1	7	1	-	8.490366725581566	5.196519973863136	GTCATTAAAA
chr19	54788320	54788321	chr19:54788321:A:C	rs17699088	A	C	.	Hoxd9_MA0913.1	10	0	-	0	0	.
chr19	54788348	54788349	chr19:54788349:A:C	rs541021746	A	C	.	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr19	54794126	54794127	chr19:54794127:G:A	rs649552	G	A	.	Hoxd9_MA0913.1	21	0	+	0	0	.
chr19	54953054	54953055	chr19:54953055:G:C	rs113459116	G	C	G	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr19	54996102	54996103	chr19:54996103:A:C	rs35607067	A	C	A	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr19	55006893	55006894	chr19:55006894:C:T	rs60906243	C	T	C	Hoxd9_MA0913.1	20	0	+	0	0	.
chr19	55018564	55018565	chr19:55018565:A:G	rs1671192	A	G	a	Hoxd9_MA0913.1	3	1	+	7.73457748109381	5.906958540598705	GTGATTAAAA
chr19	55018567	55018568	chr19:55018568:A:G	rs2304168	A	G	a	Hoxd9_MA0913.1	6	1	+	7.73457748109381	0.9191568133144692	GTGATTAAAA
chr19	55329223	55329224	chr19:55329224:A:G	rs8108987	A	G	g	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr19	55399775	55399776	chr19:55399776:C:G	rs13343706	C	G	C	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr19	55400157	55400158	chr19:55400158:T:C	rs73932626	T	C	T	Hoxd9_MA0913.1	29	0	-	0	0	.
chr19	55598434	55598435	chr19:55598435:C:G	rs498199	C	G	G	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr19	55882931	55882932	chr19:55882932:C:A	rs61652410	C	A	C	Hoxd9_MA0913.1	29	0	-	0	0	.
chr19	56164140	56164141	chr19:56164141:G:A	rs902524	G	A	G	Hoxd9_MA0913.1	10	0	-	0	0	.
chr19	56294693	56294694	chr19:56294694:C:T	rs117725419	C	T	C	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr19	56478243	56478244	chr19:56478244:G:A	rs78066039	G	A	g	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr19	56478244	56478245	chr19:56478245:G:T	rs79041486	G	T	g	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr19	56748267	56748268	chr19:56748268:T:C	rs12460697	T	C	T	Hoxd9_MA0913.1	9	1	+	8.635860738282448	7.7976343601680895	GCCATAAAAT
chr19	56900418	56900419	chr19:56900419:C:T	rs77949882	C	T	C	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr19	56985816	56985817	chr19:56985817:T:C	rs11670890	T	C	T	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr19	57077494	57077495	chr19:57077495:A:C	rs78582596	A	C	C	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr19	57247238	57247239	chr19:57247239:T:C	rs8108576	T	C	T	Hoxd9_MA0913.1	7	1	-	7.890768629900132	1.0516241525457886	ACCATTAAAA
chr19	57552958	57552959	chr19:57552959:T:G	rs73060407	T	G	T	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr19	57632664	57632665	chr19:57632665:G:A	rs144668594	G	A	G	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr19	57632680	57632681	chr19:57632681:A:T	rs10418967	A	T	T	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr19	57816748	57816749	chr19:57816749:A:G	rs148728323	A	G	.	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr19	58017252	58017253	chr19:58017253:A:G	rs1549279	A	G	g	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr19	58150181	58150182	chr19:58150182:T:A	rs8109043	T	A	T	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr19	58150213	58150214	chr19:58150214:G:A	rs159680	G	A	G	Hoxd9_MA0913.1	12	0	+	0	0	.
chr19	58197362	58197363	chr19:58197363:G:A	rs2445858	G	A	A	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr19	58374334	58374335	chr19:58374335:G:A	rs6510139	G	A	g	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr19	58394716	58394717	chr19:58394717:C:T	rs144955468	C	T	C	Hoxd9_MA0913.1	17	0	+	0	0	.
chr19	58400291	58400292	chr19:58400292:T:G	rs77412518	T	G	T	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr19	58585016	58585017	chr19:58585017:C:T	rs112047932	C	T	c	Hoxd9_MA0913.1	28	0	+	0	0	.
chr2	467734	467735	chr2:467735:T:C	rs872438	T	C	C	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr2	603876	603877	chr2:603877:T:G	rs1320339	T	G	T	Hoxd9_MA0913.1	2	1	-	8.323343304007485	7.4016741070371435	CCAATAAAAA
chr2	603882	603883	chr2:603883:G:T	rs1320340	G	T	T	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr2	638189	638190	chr2:638190:A:G	rs4854345	A	G	A	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr2	938765	938766	chr2:938766:G:C	rs4971341	G	C	G	Hoxd9_MA0913.1	22	0	-	0	0	.
chr2	1068816	1068817	chr2:1068817:C:T	rs75904748	C	T	C	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr2	1136935	1136936	chr2:1136936:A:C	rs28463827	A	C	A	Hoxd9_MA0913.1	29	0	-	0	0	.
chr2	1141234	1141235	chr2:1141235:A:G	rs6548202	A	G	A	Hoxd9_MA0913.1	4	1	-	8.246554688443613	4.9544204366686335	GTCATTAAAT
chr2	1141235	1141236	chr2:1141236:T:C	rs6548203	T	C	C	Hoxd9_MA0913.1	3	1	-	8.246554688443613	6.41893574794851	GTCATTAAAT
chr2	1209771	1209772	chr2:1209772:T:C	rs28631259	T	C	T	Hoxd9_MA0913.1	15	0	-	0	0	.
chr2	1631978	1631979	chr2:1631979:T:C	rs78945130	T	C	T	Hoxd9_MA0913.1	4	1	+	8.531537147691377	5.239402895916397	GTCATAAAAA
chr2	1748410	1748411	chr2:1748411:T:A	rs139248776	T	A	T	Hoxd9_MA0913.1	27	0	-	0	0	.
chr2	1748456	1748457	chr2:1748457:A:G	rs2382558	A	G	G	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr2	1916074	1916075	chr2:1916075:T:C	rs1432539	T	C	T	Hoxd9_MA0913.1	3	1	-	8.879672775420401	7.052053834925298	GCCATAAAAA
chr2	2526592	2526593	chr2:2526593:G:T	rs17338184	G	T	G	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr2	2651485	2651486	chr2:2651486:C:T	rs6736081	C	T	.	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr2	3024016	3024017	chr2:3024017:T:G	rs17040726	T	G	T	Hoxd9_MA0913.1	19	0	-	0	0	.
chr2	3024351	3024352	chr2:3024352:C:T	rs35642879	C	T	C	Hoxd9_MA0913.1	24	0	-	0	0	.
chr2	3105567	3105568	chr2:3105568:A:T	rs7570482	A	T	A	Hoxd9_MA0913.1	20	0	+	0	0	.
chr2	3327487	3327488	chr2:3327488:C:T	rs4854119	C	T	T	Hoxd9_MA0913.1	23	0	-	0	0	.
chr2	3605985	3605986	chr2:3605986:A:G	rs7604806	A	G	G	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr2	3621891	3621892	chr2:3621892:C:T	rs6542711	C	T	T	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr2	4219358	4219359	chr2:4219359:T:C	rs76522987	T	C	C	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr2	4356474	4356475	chr2:4356475:A:G	rs12476119	A	G	A	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr2	4874512	4874513	chr2:4874513:G:C	rs62108836	G	C	G	Hoxd9_MA0913.1	28	0	+	0	0	.
chr2	4891325	4891326	chr2:4891326:G:A	rs1371487	G	A	A	Hoxd9_MA0913.1	16	0	-	0	0	.
chr2	4965175	4965176	chr2:4965176:T:C	rs36178807	T	C	T	Hoxd9_MA0913.1	7	1	-	8.678133135028622	1.8389886576742773	GCAATTAAAC
chr2	5254969	5254970	chr2:5254970:G:A	rs11889641	G	A	G	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr2	5254970	5254971	chr2:5254971:A:C	rs1453763	A	C	C	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr2	5315145	5315146	chr2:5315146:T:A	rs1404254	T	A	A	Hoxd9_MA0913.1	0	1	-	8.853608248980283	6.764199276437873	ACAATAAAAA
chr2	5520886	5520887	chr2:5520887:A:C	rs140092052	A	C	A	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr2	5690785	5690786	chr2:5690786:A:G	rs17362772	A	G	a	Hoxd9_MA0913.1	26	0	-	0	0	.
chr2	5691018	5691019	chr2:5691019:G:A	rs181823377	G	A	G	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr2	5777547	5777548	chr2:5777548:T:C	rs1041651850	T	C	T	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr2	5815207	5815208	chr2:5815208:C:T	rs1366744	C	T	T	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr2	5946840	5946841	chr2:5946841:A:T	rs7422251	A	T	A	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr2	5946849	5946850	chr2:5946850:G:C	rs7420162	G	C	G	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr2	6193093	6193094	chr2:6193094:C:T	rs12692294	C	T	T	Hoxd9_MA0913.1	29	0	-	0	0	.
chr2	6751338	6751339	chr2:6751339:T:G	rs6720854	T	G	G	Hoxd9_MA0913.1	5	1	-	8.853608248980283	5.418806477610913	ACAATAAAAA
chr2	6982461	6982462	chr2:6982462:C:A	rs56303900	C	A	C	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr2	6982462	6982463	chr2:6982463:T:C	rs75621811	T	C	T	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr2	7040585	7040586	chr2:7040586:C:T	rs77967933	C	T	C	Hoxd9_MA0913.1	26	0	-	0	0	.
chr2	7578286	7578287	chr2:7578287:T:C	rs6725874	T	C	C	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr2	8346528	8346529	chr2:8346529:C:T	rs3111424	C	T	T	Hoxd9_MA0913.1	25	0	-	0	0	.
chr2	8642765	8642766	chr2:8642766:T:C	rs1036214419	T	C	T	Hoxd9_MA0913.1	21	0	-	0	0	.
chr2	8649008	8649009	chr2:8649009:A:G	rs76294282	A	G	A	Hoxd9_MA0913.1	1	1	-	8.287725110553424	8.635860738282448	GTCATAAAAT
chr2	8858029	8858030	chr2:8858030:C:A	rs116554173	C	A	C	Hoxd9_MA0913.1	14	0	+	0	0	.
chr2	9335761	9335762	chr2:9335762:A:G	rs539874000	A	G	A	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr2	9393400	9393401	chr2:9393401:C:G	chr2:9393401:C:G	C	G	C	Hoxd9_MA0913.1	22	0	+	0	0	.
chr2	9410750	9410751	chr2:9410751:T:C	rs11685612	T	C	t	Hoxd9_MA0913.1	14	0	+	0	0	.
chr2	9429450	9429451	chr2:9429451:C:T	rs10184067	C	T	C	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr2	9441611	9441612	chr2:9441612:C:T	rs7582154	C	T	C	Hoxd9_MA0913.1	12	0	-	0	0	.
chr2	9613956	9613957	chr2:9613957:G:C	rs11902264	G	C	C	Hoxd9_MA0913.1	19	0	+	0	0	.
chr2	9847545	9847546	chr2:9847546:T:C	rs59288259	T	C	C	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr2	9992301	9992302	chr2:9992302:C:T	rs571567460	C	T	C	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr2	10002202	10002203	chr2:10002203:C:T	rs1052838	C	T	T	Hoxd9_MA0913.1	17	0	-	0	0	.
chr2	10089783	10089784	chr2:10089784:G:A	rs11680378	G	A	G	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr2	10275428	10275429	chr2:10275429:T:A	rs77871688	T	A	T	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr2	10380160	10380161	chr2:10380161:C:T	rs115315413	C	T	C	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr2	10423786	10423787	chr2:10423787:A:G	rs1974676	A	G	G	Hoxd9_MA0913.1	13	0	+	0	0	.
chr2	10585592	10585593	chr2:10585593:T:C	rs6720112	T	C	T	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr2	10904060	10904061	chr2:10904061:A:G	rs115117372	A	G	A	Hoxd9_MA0913.1	24	0	-	0	0	.
chr2	10906056	10906057	chr2:10906057:G:T	rs74997115	G	T	G	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr2	10906058	10906059	chr2:10906059:A:G	rs115420293	A	G	A	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr2	11021417	11021418	chr2:11021418:A:G	rs11903722	A	G	A	Hoxd9_MA0913.1	12	0	+	0	0	.
chr2	11111967	11111968	chr2:11111968:T:C	rs13005670	T	C	C	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr2	11203732	11203733	chr2:11203733:T:C	rs75206920	T	C	T	Hoxd9_MA0913.1	10	0	-	0	0	.
chr2	11271356	11271357	chr2:11271357:T:C	rs10929728	T	C	T	Hoxd9_MA0913.1	3	1	-	8.812437826870472	6.984818886375368	ACAATTAAAA
chr2	11279424	11279425	chr2:11279425:C:G	rs2167126	C	G	G	Hoxd9_MA0913.1	1	1	+	8.123883530932645	5.031318518647932	GCGATAAAAA
chr2	11533907	11533908	chr2:11533908:A:G	rs11684917	A	G	A	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr2	11533925	11533926	chr2:11533926:A:G	rs143632904	A	G	A	Hoxd9_MA0913.1	6	1	+	9.801341972390743	2.985921304611402	GCAATAAAAA
chr2	11540276	11540277	chr2:11540277:C:T	rs35417544	C	T	C	Hoxd9_MA0913.1	21	0	-	0	0	.
chr2	11701597	11701598	chr2:11701598:A:G	rs10929766	A	G	A	Hoxd9_MA0913.1	24	0	+	0	0	.
chr2	11710666	11710667	chr2:11710667:T:C	rs998251959	T	C	T	Hoxd9_MA0913.1	2	1	-	8.60979621184233	6.93233777038423	ACAATAAAAT
chr2	11809765	11809766	chr2:11809766:A:C	rs1033211705	A	C	A	Hoxd9_MA0913.1	16	0	-	0	0	.
chr2	11903372	11903373	chr2:11903373:T:C	rs115751621	T	C	C	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr2	11903402	11903403	chr2:11903403:A:G	rs116803222	A	G	A	Hoxd9_MA0913.1	18	0	+	0	0	.
chr2	11963142	11963143	chr2:11963143:A:G	rs11891008	A	G	A	Hoxd9_MA0913.1	20	0	+	0	0	.
chr2	11996852	11996853	chr2:11996853:G:C	rs74466571	G	C	G	Hoxd9_MA0913.1	10	0	-	0	0	.
chr2	12017552	12017553	chr2:12017553:T:G	rs2890409	T	G	.	Hoxd9_MA0913.1	20	0	-	0	0	.
chr2	12142540	12142541	chr2:12142541:A:G	rs12992106	A	G	A	Hoxd9_MA0913.1	7	1	+	7.801678332738202	0.9625338553838594	GCAATAAACA
chr2	12334833	12334834	chr2:12334834:T:C	rs138352703	T	C	T	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr2	12676751	12676752	chr2:12676752:T:C	rs62124716	T	C	T	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr2	12951889	12951890	chr2:12951890:A:G	rs779396	A	G	G	Hoxd9_MA0913.1	16	0	+	0	0	.
chr2	13458177	13458178	chr2:13458178:T:C	rs6717167	T	C	T	Hoxd9_MA0913.1	29	0	-	0	0	.
chr2	13523923	13523924	chr2:13523924:A:G	rs57752576	A	G	A	Hoxd9_MA0913.1	16	0	+	0	0	.
chr2	13680206	13680207	chr2:13680207:C:G	rs12999021	C	G	C	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr2	13742886	13742887	chr2:13742887:G:A	rs576946757	G	A	G	Hoxd9_MA0913.1	12	0	-	0	0	.
chr2	13916391	13916392	chr2:13916392:T:C	rs188602679	T	C	T	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr2	14365824	14365825	chr2:14365825:T:G	rs10171046	T	G	G	Hoxd9_MA0913.1	25	0	-	0	0	.
chr2	15359002	15359003	chr2:15359003:C:T	rs11692624	C	T	T	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr2	15630650	15630651	chr2:15630651:C:T	rs3770471	C	T	C	Hoxd9_MA0913.1	24	0	-	0	0	.
chr2	15701095	15701096	chr2:15701096:C:A	rs75982456	C	A	C	Hoxd9_MA0913.1	15	0	-	0	0	.
chr2	15701105	15701106	chr2:15701106:T:A	rs1421610	T	A	A	Hoxd9_MA0913.1	5	1	-	7.801678332738202	7.760507910628393	GCAATAAACA
chr2	15707047	15707048	chr2:15707048:A:G	rs16862941	A	G	A	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr2	15927676	15927677	chr2:15927677:C:T	rs72770523	C	T	C	Hoxd9_MA0913.1	24	0	+	0	0	.
chr2	16067018	16067019	chr2:16067019:G:A	rs6760942	G	A	G	Hoxd9_MA0913.1	28	0	+	0	0	.
chr2	16179740	16179741	chr2:16179741:G:A	rs73213911	G	A	G	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr2	16426057	16426058	chr2:16426058:C:G	rs764828224	C	G	C	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr2	16660664	16660665	chr2:16660665:G:A	rs809538	G	A	A	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr2	17253733	17253734	chr2:17253734:T:C	rs6720417	T	C	T	Hoxd9_MA0913.1	9	1	+	8.594690316172638	7.75646393805828	GCCATTAAAT
chr2	17315869	17315870	chr2:17315870:G:A	rs1519973	G	A	G	Hoxd9_MA0913.1	11	0	-	0	0	.
chr2	17506699	17506700	chr2:17506700:G:A	rs35040026	G	A	G	Hoxd9_MA0913.1	0	1	+	7.801678332738202	6.853944609327742	GCAATAAACA
chr2	17804574	17804575	chr2:17804575:T:A	rs10856772	T	A	A	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr2	17912008	17912009	chr2:17912009:G:C	rs73225038	G	C	G	Hoxd9_MA0913.1	13	0	-	0	0	.
chr2	18399167	18399168	chr2:18399168:G:C	rs9678808	G	C	G	Hoxd9_MA0913.1	26	0	-	0	0	.
chr2	18745901	18745902	chr2:18745902:T:C	rs4832452	T	C	T	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr2	18799607	18799608	chr2:18799608:G:A	rs186574753	G	A	G	Hoxd9_MA0913.1	28	0	-	0	0	.
chr2	18884215	18884216	chr2:18884216:G:A	rs62126482	G	A	G	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr2	18977555	18977556	chr2:18977556:C:G	rs16985756	C	G	C	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr2	18998578	18998579	chr2:18998579:T:C	rs72780755	T	C	T	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr2	19031821	19031822	chr2:19031822:A:G	rs80274506	A	G	A	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr2	19098647	19098648	chr2:19098648:G:T	rs12463657	G	T	G	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr2	19363053	19363054	chr2:19363054:T:C	chr2:19363054:T:C	T	C	T	Hoxd9_MA0913.1	1	1	+	8.329997507299597	8.678133135028622	GTAATTAAAC
chr2	19479745	19479746	chr2:19479746:A:G	rs12995430	A	G	A	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr2	19631620	19631621	chr2:19631621:G:A	rs896799	G	A	A	Hoxd9_MA0913.1	22	0	+	0	0	.
chr2	19631681	19631682	chr2:19631682:T:A	rs896800	T	A	A	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr2	19675150	19675151	chr2:19675151:A:G	rs17619532	A	G	A	Hoxd9_MA0913.1	27	0	-	0	0	.
chr2	19751942	19751943	chr2:19751943:A:T	rs1551255	A	T	.	Hoxd9_MA0913.1	11	0	+	0	0	.
chr2	19902641	19902642	chr2:19902642:G:A	rs368376932	G	A	G	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr2	20392977	20392978	chr2:20392978:A:C	rs79770986	A	C	A	Hoxd9_MA0913.1	6	1	+	8.2283733949328	3.7537965322645954	GCAATAAAGA
chr2	20392992	20392993	chr2:20392993:A:G	rs11683057	A	G	A	Hoxd9_MA0913.1	21	0	+	0	0	.
chr2	20396196	20396197	chr2:20396197:T:C	rs343151	T	C	C	Hoxd9_MA0913.1	25	0	-	0	0	.
chr2	20452208	20452209	chr2:20452209:C:T	rs1290764002	C	T	C	Hoxd9_MA0913.1	18	0	+	0	0	.
chr2	20493820	20493821	chr2:20493821:G:A	rs61019536	G	A	G	Hoxd9_MA0913.1	18	0	+	0	0	.
chr2	20501346	20501347	chr2:20501347:T:C	rs59508397	T	C	T	Hoxd9_MA0913.1	5	1	-	8.323343304007485	2.101680151111617	CCAATAAAAA
chr2	20513936	20513937	chr2:20513937:G:T	rs12710740	G	T	t	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr2	20513942	20513943	chr2:20513943:C:T	rs13426692	C	T	c	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr2	20614763	20614764	chr2:20614764:C:T	rs76220803	C	T	C	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr2	20614792	20614793	chr2:20614793:T:C	rs78014567	T	C	T	Hoxd9_MA0913.1	16	0	+	0	0	.
chr2	21118397	21118398	chr2:21118398:C:T	rs767681946	C	T	C	Hoxd9_MA0913.1	0	1	-	9.168223885413955	8.220490162003495	GTAATTAAAT
chr2	21234114	21234115	chr2:21234115:C:G	rs62133423	C	G	C	Hoxd9_MA0913.1	27	0	+	0	0	.
chr2	21254990	21254991	chr2:21254991:G:T	rs35437800	G	T	G	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr2	21406930	21406931	chr2:21406931:A:G	chr2:21406931:A:G	A	G	A	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr2	22217915	22217916	chr2:22217916:T:C	rs4635553	T	C	C	Hoxd9_MA0913.1	19	0	+	0	0	.
chr2	22356101	22356102	chr2:22356102:C:G	rs543630286	C	G	C	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr2	22536263	22536264	chr2:22536264:C:A	rs78141893	C	A	C	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr2	22754425	22754426	chr2:22754426:C:T	rs1919404	C	T	T	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr2	22970232	22970233	chr2:22970233:T:C	rs34233089	T	C	T	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr2	23269360	23269361	chr2:23269361:T:C	rs11683640	T	C	T	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr2	23287291	23287292	chr2:23287292:A:C	rs35355490	A	C	A	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr2	23294122	23294123	chr2:23294123:T:C	rs1020090	T	C	T	Hoxd9_MA0913.1	18	0	-	0	0	.
chr2	23450069	23450070	chr2:23450070:G:A	rs11889528	G	A	G	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr2	23450073	23450074	chr2:23450074:G:A	rs191014771	G	A	G	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr2	23550094	23550095	chr2:23550095:A:G	rs7596142	A	G	G	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr2	23550099	23550100	chr2:23550100:C:T	rs114835550	C	T	C	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr2	23824830	23824831	chr2:23824831:G:T	rs78045089	G	T	G	Hoxd9_MA0913.1	0	1	+	8.678133135028622	5.640990439075751	GCAATTAAAC
chr2	23925667	23925668	chr2:23925668:A:C	rs963726	A	C	C	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr2	24008252	24008253	chr2:24008253:A:G	rs72781671	A	G	A	Hoxd9_MA0913.1	22	0	-	0	0	.
chr2	24449265	24449266	chr2:24449266:G:A	rs192164027	G	A	A	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr2	24452626	24452627	chr2:24452627:T:C	rs2584933	T	C	C	Hoxd9_MA0913.1	20	0	-	0	0	.
chr2	24960052	24960053	chr2:24960053:T:C	rs7572472	T	C	C	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr2	25098552	25098553	chr2:25098553:C:T	rs72850899	C	T	C	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr2	25257689	25257690	chr2:25257690:C:G	rs915301610	C	G	C	Hoxd9_MA0913.1	16	0	-	0	0	.
chr2	25332860	25332861	chr2:25332861:G:A	rs778040058	G	A	G	Hoxd9_MA0913.1	27	0	+	0	0	.
chr2	25332862	25332863	chr2:25332863:G:A	rs924995738	G	A	G	Hoxd9_MA0913.1	29	0	+	0	0	.
chr2	25379580	25379581	chr2:25379581:A:G	rs2304428	A	G	G	Hoxd9_MA0913.1	22	0	+	0	0	.
chr2	26122849	26122850	chr2:26122850:C:T	rs147595858	C	T	C	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr2	26122888	26122889	chr2:26122889:C:T	rs56414426	C	T	C	Hoxd9_MA0913.1	20	0	+	0	0	.
chr2	26243903	26243904	chr2:26243904:C:T	rs3806514	C	T	T	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr2	26282989	26282990	chr2:26282990:A:G	rs17528590	A	G	A	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr2	26284237	26284238	chr2:26284238:A:G	rs111466374	A	G	A	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr2	26341100	26341101	chr2:26341101:G:A	rs7584739	G	A	G	Hoxd9_MA0913.1	23	0	+	0	0	.
chr2	26363515	26363516	chr2:26363516:C:T	rs80042903	C	T	C	Hoxd9_MA0913.1	27	0	+	0	0	.
chr2	26597348	26597349	chr2:26597349:G:A	rs11677789	G	A	G	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr2	26934919	26934920	chr2:26934920:T:C	rs920435	T	C	T	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr2	27651464	27651465	chr2:27651465:A:C	rs10201652	A	C	C	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr2	27844863	27844864	chr2:27844864:G:C	rs6737826	G	C	G	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr2	27885879	27885880	chr2:27885880:A:G	rs66463479	A	G	A	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr2	27922445	27922446	chr2:27922446:A:G	rs72810585	A	G	A	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr2	28269476	28269477	chr2:28269477:G:T	rs907355570	G	T	G	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr2	28281282	28281283	chr2:28281283:G:C	rs870969	G	C	G	Hoxd9_MA0913.1	20	0	+	0	0	.
chr2	28463634	28463635	chr2:28463635:C:T	rs2972045	C	T	C	Hoxd9_MA0913.1	23	0	+	0	0	.
chr2	28463635	28463636	chr2:28463636:G:A	rs1581036	G	A	C	Hoxd9_MA0913.1	24	0	+	0	0	.
chr2	28464358	28464359	chr2:28464359:A:G	rs56049771	A	G	A	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr2	28464365	28464366	chr2:28464366:T:C	rs11681188	T	C	C	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr2	28567165	28567166	chr2:28567166:T:C	rs75725171	T	C	T	Hoxd9_MA0913.1	20	0	+	0	0	.
chr2	28585031	28585032	chr2:28585032:C:T	rs4666103	C	T	C	Hoxd9_MA0913.1	16	0	-	0	0	.
chr2	28623694	28623695	chr2:28623695:A:G	rs7604903	A	G	A	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr2	28623700	28623701	chr2:28623701:A:G	rs6547863	A	G	G	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr2	28647757	28647758	chr2:28647758:C:T	rs72782244	C	T	C	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr2	28647771	28647772	chr2:28647772:T:C	rs77032532	T	C	T	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr2	28802612	28802613	chr2:28802613:A:G	rs3190	A	G	A	Hoxd9_MA0913.1	27	0	-	0	0	.
chr2	28898220	28898221	chr2:28898221:A:G	rs73920395	A	G	A	Hoxd9_MA0913.1	3	1	+	8.187202972822991	6.359584032327886	GCAATTAAGA
chr2	29064325	29064326	chr2:29064326:G:A	rs10495767	G	A	G	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr2	29064360	29064361	chr2:29064361:T:C	rs10196859	T	C	T	Hoxd9_MA0913.1	24	0	+	0	0	.
chr2	29064362	29064363	chr2:29064363:A:G	rs10194257	A	G	G	Hoxd9_MA0913.1	26	0	+	0	0	.
chr2	29192703	29192704	chr2:29192704:G:A	rs116770130	G	A	G	Hoxd9_MA0913.1	20	0	+	0	0	.
chr2	29239538	29239539	chr2:29239539:A:G	rs13397113	A	G	G	Hoxd9_MA0913.1	16	0	-	0	0	.
chr2	29259417	29259418	chr2:29259418:C:T	rs114258606	C	T	T	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr2	29271752	29271753	chr2:29271753:A:G	rs61238373	A	G	T	Hoxd9_MA0913.1	18	0	-	0	0	.
chr2	29462559	29462560	chr2:29462560:C:T	rs3923029	C	T	C	Hoxd9_MA0913.1	9	1	+	8.719303557138431	9.55752993525279	GCAATAAAAC
chr2	29479593	29479594	chr2:29479594:T:A	rs3885973	T	A	T	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr2	29480571	29480572	chr2:29480572:A:G	rs11680438	A	G	A	Hoxd9_MA0913.1	4	1	-	9.801341972390743	6.509207720615763	GCAATAAAAA
chr2	29480579	29480580	chr2:29480580:G:A	rs62129089	G	A	G	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr2	29502485	29502486	chr2:29502486:G:A	rs147252027	G	A	G	Hoxd9_MA0913.1	9	1	-	8.371167929409406	9.209394307523764	GTAATAAAAC
chr2	29601297	29601298	chr2:29601298:C:G	rs137891142	C	G	C	Hoxd9_MA0913.1	23	0	-	0	0	.
chr2	29867474	29867475	chr2:29867475:T:C	rs12620548	T	C	T	Hoxd9_MA0913.1	8	1	-	9.55752993525279	7.984561357794846	GCAATAAAAT
chr2	30038680	30038681	chr2:30038681:C:T	rs75200823	C	T	c	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr2	30115486	30115487	chr2:30115487:G:A	chr2:30115487:G:A	G	A	G	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr2	30158320	30158321	chr2:30158321:A:G	rs7603324	A	G	A	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr2	30252371	30252372	chr2:30252372:T:G	rs11690883	T	G	T	Hoxd9_MA0913.1	13	0	+	0	0	.
chr2	30254280	30254281	chr2:30254281:T:C	rs13027149	T	C	C	Hoxd9_MA0913.1	26	0	+	0	0	.
chr2	30267070	30267071	chr2:30267071:T:C	rs74914479	T	C	T	Hoxd9_MA0913.1	26	0	-	0	0	.
chr2	30267074	30267075	chr2:30267075:T:C	rs72787722	T	C	T	Hoxd9_MA0913.1	22	0	-	0	0	.
chr2	30275111	30275112	chr2:30275112:C:T	rs11694633	C	T	C	Hoxd9_MA0913.1	26	0	-	0	0	.
chr2	30472630	30472631	chr2:30472631:T:A	rs829563	T	A	T	Hoxd9_MA0913.1	9	1	-	8.490366725581566	8.246554688443613	GTCATTAAAA
chr2	30503898	30503899	chr2:30503899:A:C	rs829660	A	C	C	Hoxd9_MA0913.1	8	1	-	8.281840948251881	8.187202972822991	GCAATTAATA
chr2	30648312	30648313	chr2:30648313:A:T	rs2602785	A	T	T	Hoxd9_MA0913.1	22	0	+	0	0	.
chr2	30684750	30684751	chr2:30684751:T:G	rs62142170	T	G	T	Hoxd9_MA0913.1	2	1	-	7.973723031895638	7.052053834925298	GCAGTAAAAA
chr2	30761047	30761048	chr2:30761048:C:G	rs581331	C	G	C	Hoxd9_MA0913.1	10	0	+	0	0	.
chr2	30948543	30948544	chr2:30948544:C:T	rs889897	C	T	C	Hoxd9_MA0913.1	25	0	+	0	0	.
chr2	30949657	30949658	chr2:30949658:G:A	rs10209534	G	A	g	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr2	31015657	31015658	chr2:31015658:C:T	rs12987759	C	T	C	Hoxd9_MA0913.1	28	0	+	0	0	.
chr2	31101744	31101745	chr2:31101745:T:C	rs2216830	T	C	T	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr2	31189779	31189780	chr2:31189780:T:C	rs1562021	T	C	t	Hoxd9_MA0913.1	3	1	-	8.635860738282448	6.8082417977873435	GCCATAAAAT
chr2	31208339	31208340	chr2:31208340:T:A	rs6727638	T	A	T	Hoxd9_MA0913.1	17	0	-	0	0	.
chr2	31231524	31231525	chr2:31231525:C:T	rs4952070	C	T	T	Hoxd9_MA0913.1	9	1	-	8.334848631621252	9.801341972390743	GCAATAAAAG
chr2	31238528	31238529	chr2:31238529:G:A	rs590557	G	A	A	Hoxd9_MA0913.1	10	0	+	0	0	.
chr2	31265211	31265212	chr2:31265212:C:T	rs673108	C	T	T	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr2	31384408	31384409	chr2:31384409:A:G	rs148756340	A	G	A	Hoxd9_MA0913.1	24	0	+	0	0	.
chr2	31447356	31447357	chr2:31447357:A:G	rs11674948	A	G	A	Hoxd9_MA0913.1	4	1	-	9.55752993525279	6.265395683477809	GCAATAAAAT
chr2	31987684	31987685	chr2:31987685:C:A	rs145001460	C	A	C	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr2	32026400	32026401	chr2:32026401:A:C	rs68076008	A	C	C	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr2	32756160	32756161	chr2:32756161:C:T	rs79176184	C	T	C	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr2	32882721	32882722	chr2:32882722:T:C	rs80106645	T	C	T	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr2	32895705	32895706	chr2:32895706:G:A	rs11884645	G	A	G	Hoxd9_MA0913.1	22	0	-	0	0	.
chr2	33214053	33214054	chr2:33214054:A:G	rs1377946	A	G	G	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr2	33532400	33532401	chr2:33532401:C:A	rs74261895	C	A	C	Hoxd9_MA0913.1	22	0	-	0	0	.
chr2	33539649	33539650	chr2:33539650:C:T	rs4286255	C	T	T	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr2	33555163	33555164	chr2:33555164:G:A	rs10182608	G	A	A	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr2	34005483	34005484	chr2:34005484:T:C	rs74406186	T	C	T	Hoxd9_MA0913.1	11	0	+	0	0	.
chr2	34012034	34012035	chr2:34012035:A:G	rs10197794	A	G	A	Hoxd9_MA0913.1	20	0	-	0	0	.
chr2	34576954	34576955	chr2:34576955:G:T	rs72790819	G	T	G	Hoxd9_MA0913.1	24	0	-	0	0	.
chr2	34810707	34810708	chr2:34810708:T:G	chr2:34810708:T:G	T	G	T	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr2	35468347	35468348	chr2:35468348:T:A	rs111934281	T	A	A	Hoxd9_MA0913.1	27	0	+	0	0	.
chr2	35503799	35503800	chr2:35503800:A:G	rs17016797	A	G	A	Hoxd9_MA0913.1	0	1	+	8.60979621184233	9.55752993525279	ACAATAAAAT
chr2	35503825	35503826	chr2:35503826:C:T	rs11124445	C	T	C	Hoxd9_MA0913.1	26	0	+	0	0	.
chr2	35522615	35522616	chr2:35522616:T:A	rs2119030	T	A	T	Hoxd9_MA0913.1	28	0	-	0	0	.
chr2	35831727	35831728	chr2:35831728:A:G	rs4670509	A	G	G	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr2	35858196	35858197	chr2:35858197:A:C	rs1879131	A	C	C	Hoxd9_MA0913.1	28	0	+	0	0	.
chr2	36270801	36270802	chr2:36270802:G:C	rs12468853	G	C	G	Hoxd9_MA0913.1	12	0	-	0	0	.
chr2	36426148	36426149	chr2:36426149:G:A	rs574712662	G	A	G	Hoxd9_MA0913.1	14	0	+	0	0	.
chr2	36847869	36847870	chr2:36847870:T:A	rs1861435	T	A	T	Hoxd9_MA0913.1	11	0	-	0	0	.
chr2	37150241	37150242	chr2:37150242:C:G	rs74446706	C	G	G	Hoxd9_MA0913.1	20	0	+	0	0	.
chr2	37151286	37151287	chr2:37151287:C:A	rs75116944	C	A	C	Hoxd9_MA0913.1	25	0	+	0	0	.
chr2	37395829	37395830	chr2:37395830:T:C	rs76355884	T	C	T	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr2	37535616	37535617	chr2:37535617:T:C	rs4538180	T	C	T	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr2	37582842	37582843	chr2:37582843:T:A	rs17021028	T	A	T	Hoxd9_MA0913.1	15	0	-	0	0	.
chr2	37582849	37582850	chr2:37582850:T:C	rs10490285	T	C	T	Hoxd9_MA0913.1	8	1	-	8.371167929409406	6.798199351951464	GTAATAAAAC
chr2	37582875	37582876	chr2:37582876:T:G	rs6708088	T	G	T	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr2	37733469	37733470	chr2:37733470:A:T	rs17511102	A	T	A	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr2	37830149	37830150	chr2:37830150:T:C	rs17410852	T	C	T	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr2	37830177	37830178	chr2:37830178:G:A	rs11124617	G	A	G	Hoxd9_MA0913.1	21	0	+	0	0	.
chr2	37836498	37836499	chr2:37836499:G:A	rs6744279	G	A	G	Hoxd9_MA0913.1	21	0	-	0	0	.
chr2	37837876	37837877	chr2:37837877:A:G	rs78168723	A	G	A	Hoxd9_MA0913.1	3	1	+	7.801678332738202	5.974059392243097	GCAATAAACA
chr2	37837890	37837891	chr2:37837891:T:G	rs10205392	T	G	G	Hoxd9_MA0913.1	17	0	+	0	0	.
chr2	37837902	37837903	chr2:37837903:G:C	rs17411071	G	C	G	Hoxd9_MA0913.1	29	0	+	0	0	.
chr2	38045806	38045807	chr2:38045807:G:A	rs62136319	G	A	A	Hoxd9_MA0913.1	15	0	+	0	0	.
chr2	38167983	38167984	chr2:38167984:C:A	rs232565	C	A	A	Hoxd9_MA0913.1	16	0	+	0	0	.
chr2	38217364	38217365	chr2:38217365:A:C	rs12712580	A	C	A	Hoxd9_MA0913.1	28	0	-	0	0	.
chr2	38737678	38737679	chr2:38737679:C:T	rs80060039	C	T	C	Hoxd9_MA0913.1	26	0	+	0	0	.
chr2	38798286	38798287	chr2:38798287:T:A	rs199851623	T	A	T	Hoxd9_MA0913.1	18	0	-	0	0	.
chr2	39039242	39039243	chr2:39039243:C:T	rs6544191	C	T	T	Hoxd9_MA0913.1	14	0	-	0	0	.
chr2	39513552	39513553	chr2:39513553:C:G	rs140342286	C	G	C	Hoxd9_MA0913.1	28	0	-	0	0	.
chr2	39568279	39568280	chr2:39568280:A:G	rs80253345	A	G	A	Hoxd9_MA0913.1	3	1	+	8.287725110553424	6.460106170058319	GTCATAAAAT
chr2	39582190	39582191	chr2:39582191:A:G	rs780354759	A	G	A	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr2	39782914	39782915	chr2:39782915:G:A	rs11684302	G	A	G	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr2	40032638	40032639	chr2:40032639:C:A	rs2215979	C	A	A	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr2	40049951	40049952	chr2:40049952:A:T	rs7576153	A	T	T	Hoxd9_MA0913.1	8	1	+	8.334848631621252	6.856518029592199	GCAATAAAAG
chr2	40049967	40049968	chr2:40049968:C:T	rs560314035	C	T	C	Hoxd9_MA0913.1	24	0	+	0	0	.
chr2	40166082	40166083	chr2:40166083:G:C	rs440056	G	C	C	Hoxd9_MA0913.1	0	1	+	8.334848631621252	6.856849963237993	GCAATAAAAG
chr2	41060140	41060141	chr2:41060141:T:A	rs741608	T	A	T	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr2	41121393	41121394	chr2:41121394:A:G	rs2216817	A	G	G	Hoxd9_MA0913.1	23	0	+	0	0	.
chr2	41187988	41187989	chr2:41187989:G:A	rs1899286	G	A	A	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr2	41207920	41207921	chr2:41207921:G:C	rs148962959	G	C	G	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr2	41327320	41327321	chr2:41327321:T:C	rs1588184	T	C	C	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr2	41338800	41338801	chr2:41338801:A:C	rs7557547	A	C	c	Hoxd9_MA0913.1	5	1	+	9.55752993525279	6.122728163883419	GCAATAAAAT
chr2	41376533	41376534	chr2:41376534:T:C	rs2068390	T	C	C	Hoxd9_MA0913.1	5	1	-	9.55752993525279	3.3358667823569204	GCAATAAAAT
chr2	41622870	41622871	chr2:41622871:C:T	rs62136517	C	T	T	Hoxd9_MA0913.1	28	0	+	0	0	.
chr2	41721279	41721280	chr2:41721280:A:G	rs11688629	A	G	A	Hoxd9_MA0913.1	2	1	+	7.984561357794846	6.307102916336748	GCAATAAAGT
chr2	41907959	41907960	chr2:41907960:T:C	rs17772527	T	C	C	Hoxd9_MA0913.1	23	0	+	0	0	.
chr2	42090200	42090201	chr2:42090201:G:C	rs7571832	G	C	C	Hoxd9_MA0913.1	0	1	+	9.453206344661718	7.97520767627846	GTAATAAAAA
chr2	42108044	42108045	chr2:42108045:T:C	rs2083418	T	C	C	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr2	42217010	42217011	chr2:42217011:T:C	rs145229981	T	C	T	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr2	42224413	42224414	chr2:42224414:C:T	rs2118888	C	T	T	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr2	42325870	42325871	chr2:42325871:G:A	rs7588931	G	A	G	Hoxd9_MA0913.1	21	0	-	0	0	.
chr2	42386782	42386783	chr2:42386783:G:T	rs115759531	G	T	G	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr2	42386821	42386822	chr2:42386822:T:G	rs371360543	T	G	T	Hoxd9_MA0913.1	23	0	+	0	0	.
chr2	42410916	42410917	chr2:42410917:T:C	rs222471	T	C	T	Hoxd9_MA0913.1	3	1	-	7.4131794346509094	5.585560494155805	GCCATAAAAG
chr2	42777917	42777918	chr2:42777918:C:G	rs9941680	C	G	g	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr2	42926303	42926304	chr2:42926304:A:T	rs116716255	A	T	A	Hoxd9_MA0913.1	28	0	-	0	0	.
chr2	42998468	42998469	chr2:42998469:C:G	rs4953705	C	G	C	Hoxd9_MA0913.1	21	0	-	0	0	.
chr2	43139999	43140000	chr2:43140000:T:A	rs72871787	T	A	T	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr2	43230123	43230124	chr2:43230124:G:A	rs745314393	G	A	G	Hoxd9_MA0913.1	26	0	-	0	0	.
chr2	43311679	43311680	chr2:43311680:G:T	rs13405434	G	T	G	Hoxd9_MA0913.1	0	1	+	8.879672775420401	5.842530079467531	GCCATAAAAA
chr2	43313436	43313437	chr2:43313437:G:A	rs79571526	G	A	G	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr2	43363343	43363344	chr2:43363344:C:T	rs146469603	C	T	C	Hoxd9_MA0913.1	19	0	+	0	0	.
chr2	43371793	43371794	chr2:43371794:T:C	rs542422632	T	C	T	Hoxd9_MA0913.1	15	0	-	0	0	.
chr2	43676547	43676548	chr2:43676548:C:T	rs557232530	C	T	C	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr2	43776870	43776871	chr2:43776871:T:C	rs2288709	T	C	C	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr2	43792486	43792487	chr2:43792487:C:G	rs28483979	C	G	C	Hoxd9_MA0913.1	29	0	-	0	0	.
chr2	44005494	44005495	chr2:44005495:C:T	rs10084398	C	T	T	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr2	44136335	44136336	chr2:44136336:A:G	rs34189067	A	G	A	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr2	44246833	44246834	chr2:44246834:G:T	rs10460534	G	T	G	Hoxd9_MA0913.1	16	0	-	0	0	.
chr2	44596847	44596848	chr2:44596848:A:C	rs12622145	A	C	A	Hoxd9_MA0913.1	16	0	+	0	0	.
chr2	44604813	44604814	chr2:44604814:T:C	rs17390029	T	C	T	Hoxd9_MA0913.1	6	1	-	8.287725110553424	1.4723044427740832	GTCATAAAAT
chr2	44655863	44655864	chr2:44655864:G:A	rs1445917427	G	A	G	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr2	44818324	44818325	chr2:44818325:T:C	rs6748486	T	C	T	Hoxd9_MA0913.1	2	1	-	8.2283733949328	6.550914953474702	GCAATAAAGA
chr2	44835109	44835110	chr2:44835110:C:T	rs62134195	C	T	C	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr2	44895042	44895043	chr2:44895043:G:A	rs114900964	G	A	G	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr2	44919895	44919896	chr2:44919896:C:T	rs556151	C	T	T	Hoxd9_MA0913.1	13	0	+	0	0	.
chr2	45069773	45069774	chr2:45069774:C:T	rs11685742	C	T	C	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr2	45171959	45171960	chr2:45171960:C:G	rs80121466	C	G	G	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr2	45210838	45210839	chr2:45210839:T:C	rs6760793	T	C	T	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr2	45210863	45210864	chr2:45210864:G:C	rs58627708	G	C	G	Hoxd9_MA0913.1	14	0	+	0	0	.
chr2	45344563	45344564	chr2:45344564:G:A	rs6760244	G	A	A	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr2	45466104	45466105	chr2:45466105:C:T	rs6544821	C	T	T	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr2	45842415	45842416	chr2:45842416:A:G	rs61763781	A	G	G	Hoxd9_MA0913.1	3	1	+	7.4131794346509094	5.585560494155805	GCCATAAAAG
chr2	45844330	45844331	chr2:45844331:T:C	chr2:45844331:T:C	T	C	T	Hoxd9_MA0913.1	2	1	-	8.2283733949328	6.550914953474702	GCAATAAAGA
chr2	45920574	45920575	chr2:45920575:G:A	rs74889586	G	A	G	Hoxd9_MA0913.1	18	0	+	0	0	.
chr2	45932889	45932890	chr2:45932890:A:G	rs4267553	A	G	A	Hoxd9_MA0913.1	4	1	-	8.531537147691377	5.239402895916397	GTCATAAAAA
chr2	46098659	46098660	chr2:46098660:A:G	rs75254510	A	G	A	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr2	46210203	46210204	chr2:46210204:A:G	rs72793680	A	G	A	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr2	46259604	46259605	chr2:46259605:T:C	rs1048477882	T	C	T	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr2	46260060	46260061	chr2:46260061:A:G	rs34826400	A	G	A	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr2	46275839	46275840	chr2:46275840:A:G	rs1473328	A	G	A	Hoxd9_MA0913.1	28	0	+	0	0	.
chr2	46300164	46300165	chr2:46300165:C:A	rs72885039	C	A	C	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr2	46387607	46387608	chr2:46387608:C:T	rs11125073	C	T	T	Hoxd9_MA0913.1	12	0	-	0	0	.
chr2	46557920	46557921	chr2:46557921:G:C	rs72875696	G	C	G	Hoxd9_MA0913.1	23	0	-	0	0	.
chr2	46653698	46653699	chr2:46653699:A:C	rs11886220	A	C	A	Hoxd9_MA0913.1	12	0	-	0	0	.
chr2	46665818	46665819	chr2:46665819:C:G	rs2346877	C	G	G	Hoxd9_MA0913.1	23	0	-	0	0	.
chr2	46889277	46889278	chr2:46889278:C:T	rs62136786	C	T	t	Hoxd9_MA0913.1	1	1	+	8.853608248980283	8.505472621251258	ACAATAAAAA
chr2	46898774	46898775	chr2:46898775:C:G	rs7574514	C	G	G	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr2	46972031	46972032	chr2:46972032:G:A	rs72806538	G	A	G	Hoxd9_MA0913.1	2	1	-	8.594690316172638	3.066015481292197	GCCATTAAAT
chr2	46989799	46989800	chr2:46989800:G:A	rs183050251	G	A	G	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr2	47288007	47288008	chr2:47288008:A:G	rs13386635	A	G	A	Hoxd9_MA0913.1	3	1	+	8.853608248980283	7.025989308485178	ACAATAAAAA
chr2	47295228	47295229	chr2:47295229:A:G	rs10192326	A	G	A	Hoxd9_MA0913.1	22	0	+	0	0	.
chr2	47654928	47654929	chr2:47654929:G:C	rs113323112	G	C	G	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr2	47697384	47697385	chr2:47697385:A:G	rs189041282	A	G	A	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr2	47698346	47698347	chr2:47698347:T:C	rs376717874	T	C	T	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr2	47735019	47735020	chr2:47735020:G:C	rs72809576	G	C	C	Hoxd9_MA0913.1	14	0	-	0	0	.
chr2	47867415	47867416	chr2:47867416:G:A	rs1158147757	G	A	G	Hoxd9_MA0913.1	23	0	+	0	0	.
chr2	48173025	48173026	chr2:48173026:T:A	rs4146604	T	A	T	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr2	48236694	48236695	chr2:48236695:G:T	rs1396825	G	T	T	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr2	48248821	48248822	chr2:48248822:T:C	rs17037218	T	C	T	Hoxd9_MA0913.1	24	0	+	0	0	.
chr2	48327051	48327052	chr2:48327052:G:A	rs11676168	G	A	A	Hoxd9_MA0913.1	18	0	-	0	0	.
chr2	48400816	48400817	chr2:48400817:T:C	rs10191938	T	C	T	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr2	48601364	48601365	chr2:48601365:G:A	rs35883831	G	A	A	Hoxd9_MA0913.1	0	1	+	8.32301137036169	7.375277646951231	GCAATAAATA
chr2	48606066	48606067	chr2:48606067:T:C	rs62137479	T	C	T	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr2	48673911	48673912	chr2:48673912:C:T	rs28666758	C	T	C	Hoxd9_MA0913.1	9	1	-	7.4131794346509094	8.879672775420401	GCCATAAAAG
chr2	48724351	48724352	chr2:48724352:G:A	rs6760924	G	A	G	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr2	48733177	48733178	chr2:48733178:A:G	rs4637174	A	G	A	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr2	48791700	48791701	chr2:48791701:C:G	rs79266609	C	G	C	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr2	48954331	48954332	chr2:48954332:G:A	rs6545085	G	A	A	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr2	48992075	48992076	chr2:48992076:G:A	rs13032037	G	A	G	Hoxd9_MA0913.1	18	0	-	0	0	.
chr2	49972558	49972559	chr2:49972559:T:G	rs17439363	T	G	T	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr2	50220907	50220908	chr2:50220908:T:C	rs585945	T	C	T	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr2	50585752	50585753	chr2:50585753:T:G	rs7584604	T	G	G	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr2	50596599	50596600	chr2:50596600:T:C	rs62142319	T	C	C	Hoxd9_MA0913.1	17	0	-	0	0	.
chr2	50596633	50596634	chr2:50596634:G:A	rs62142320	G	A	G	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr2	50650257	50650258	chr2:50650258:T:C	rs858955	T	C	T	Hoxd9_MA0913.1	5	1	-	7.973723031895638	1.7520598789997708	GCAGTAAAAA
chr2	50995968	50995969	chr2:50995969:C:T	rs888242	C	T	T	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr2	51033047	51033048	chr2:51033048:C:T	rs55761287	C	T	C	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr2	51425176	51425177	chr2:51425177:A:T	rs72887312	A	T	A	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr2	51472950	51472951	chr2:51472951:G:A	rs17862672	G	A	A	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr2	51681260	51681261	chr2:51681261:T:C	rs959661	T	C	C	Hoxd9_MA0913.1	9	1	-	7.932552609785828	6.466059269016337	GCAGTTAAAA
chr2	51693798	51693799	chr2:51693799:T:A	rs12691185	T	A	N	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr2	52396681	52396682	chr2:52396682:T:C	rs1991152	T	C	T	Hoxd9_MA0913.1	19	0	+	0	0	.
chr2	52585019	52585020	chr2:52585020:A:C	rs72884207	A	C	A	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr2	53019018	53019019	chr2:53019019:A:G	chr2:53019019:A:G	A	G	A	Hoxd9_MA0913.1	19	0	+	0	0	.
chr2	53309728	53309729	chr2:53309729:A:T	rs2161782	A	T	a	Hoxd9_MA0913.1	6	1	+	8.282172881897674	5.858852934363689	CCAATTAAAA
chr2	53313555	53313556	chr2:53313556:A:C	rs11895925	A	C	A	Hoxd9_MA0913.1	11	0	+	0	0	.
chr2	53366718	53366719	chr2:53366719:T:C	rs10205628	T	C	T	Hoxd9_MA0913.1	19	0	-	0	0	.
chr2	53820294	53820295	chr2:53820295:G:A	rs2542574	G	A	A	Hoxd9_MA0913.1	26	0	+	0	0	.
chr2	53878872	53878873	chr2:53878873:C:A	rs805394	C	A	C	Hoxd9_MA0913.1	25	0	-	0	0	.
chr2	54099866	54099867	chr2:54099867:A:G	rs55820614	A	G	A	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr2	54208452	54208453	chr2:54208453:G:A	chr2:54208453:G:A	G	A	G	Hoxd9_MA0913.1	19	0	-	0	0	.
chr2	54208452	54208453	chr2:54208453:G:T	rs11125528	G	T	G	Hoxd9_MA0913.1	19	0	-	0	0	.
chr2	54272206	54272207	chr2:54272207:A:G	rs843740	A	G	A	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr2	54360521	54360522	chr2:54360522:G:C	rs13184	G	C	G	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr2	54370870	54370871	chr2:54370871:G:A	rs12621416	G	A	G	Hoxd9_MA0913.1	26	0	-	0	0	.
chr2	54479725	54479726	chr2:54479726:A:G	rs567042953	A	G	A	Hoxd9_MA0913.1	25	0	+	0	0	.
chr2	54613188	54613189	chr2:54613189:A:G	rs12475598	A	G	A	Hoxd9_MA0913.1	20	0	+	0	0	.
chr2	54988688	54988689	chr2:54988689:G:A	rs2580771	G	A	A	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr2	55420994	55420995	chr2:55420995:G:A	rs3762511	G	A	A	Hoxd9_MA0913.1	28	0	+	0	0	.
chr2	55424487	55424488	chr2:55424488:C:T	rs1902060	C	T	C	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr2	55616157	55616158	chr2:55616158:T:C	rs1084522	T	C	T	Hoxd9_MA0913.1	20	0	-	0	0	.
chr2	55659735	55659736	chr2:55659736:G:A	rs6725101	G	A	G	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr2	55949499	55949500	chr2:55949500:A:G	rs17047345	A	G	A	Hoxd9_MA0913.1	14	0	+	0	0	.
chr2	55978688	55978689	chr2:55978689:C:T	rs11686318	C	T	C	Hoxd9_MA0913.1	23	0	+	0	0	.
chr2	56009718	56009719	chr2:56009719:G:A	rs1368242	G	A	G	Hoxd9_MA0913.1	26	0	-	0	0	.
chr2	56134011	56134012	chr2:56134012:C:T	rs111765565	C	T	C	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr2	56231209	56231210	chr2:56231210:T:C	rs4672099	T	C	T	Hoxd9_MA0913.1	7	1	-	8.281840948251881	1.442696470897538	GCAATTAATA
chr2	56267769	56267770	chr2:56267770:A:C	rs6727111	A	C	C	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr2	56267770	56267771	chr2:56267771:A:C	rs6727112	A	C	C	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr2	56714116	56714117	chr2:56714117:C:T	rs13423875	C	T	C	Hoxd9_MA0913.1	17	0	-	0	0	.
chr2	56736015	56736016	chr2:56736016:G:A	rs62163363	G	A	G	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr2	56951307	56951308	chr2:56951308:T:C	rs12465938	T	C	T	Hoxd9_MA0913.1	9	1	-	8.812437826870472	7.34594448610098	ACAATTAAAA
chr2	57180597	57180598	chr2:57180598:A:G	rs72811394	A	G	A	Hoxd9_MA0913.1	29	0	+	0	0	.
chr2	57291738	57291739	chr2:57291739:A:T	rs76773290	A	T	A	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr2	57878069	57878070	chr2:57878070:A:G	rs112514175	A	G	A	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr2	57949528	57949529	chr2:57949529:T:C	rs60262666	T	C	T	Hoxd9_MA0913.1	28	0	-	0	0	.
chr2	58596634	58596635	chr2:58596635:T:C	rs7604277	T	C	T	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr2	58644922	58644923	chr2:58644923:A:G	rs7591633	A	G	G	Hoxd9_MA0913.1	23	0	+	0	0	.
chr2	59013503	59013504	chr2:59013504:A:G	rs2192459	A	G	A	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr2	59033844	59033845	chr2:59033845:T:G	chr2:59033845:T:G	T	G	T	Hoxd9_MA0913.1	19	0	-	0	0	.
chr2	59277640	59277641	chr2:59277641:A:G	rs1558596	A	G	G	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr2	59406722	59406723	chr2:59406723:T:C	rs4672288	T	C	C	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr2	59587925	59587926	chr2:59587926:G:T	rs728343	G	T	G	Hoxd9_MA0913.1	15	0	+	0	0	.
chr2	59782406	59782407	chr2:59782407:C:T	rs1442882	C	T	T	Hoxd9_MA0913.1	26	0	+	0	0	.
chr2	59782409	59782410	chr2:59782410:C:T	rs7568615	C	T	C	Hoxd9_MA0913.1	29	0	+	0	0	.
chr2	59936275	59936276	chr2:59936276:T:G	rs1050052216	T	G	T	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr2	60350779	60350780	chr2:60350780:T:C	rs243026	T	C	T	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr2	60412597	60412598	chr2:60412598:T:C	rs17330904	T	C	T	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr2	60494170	60494171	chr2:60494171:C:T	rs866929981	C	T	C	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr2	60494175	60494176	chr2:60494176:A:G	rs7584113	A	G	G	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr2	60731151	60731152	chr2:60731152:G:A	rs6710364	G	A	G	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr2	60752811	60752812	chr2:60752812:A:G	rs12991375	A	G	a	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr2	60780976	60780977	chr2:60780977:A:G	rs17538323	A	G	A	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr2	62379687	62379688	chr2:62379688:T:C	rs558648577	T	C	T	Hoxd9_MA0913.1	14	0	-	0	0	.
chr2	62382747	62382748	chr2:62382748:C:T	rs146326454	C	T	C	Hoxd9_MA0913.1	20	0	-	0	0	.
chr2	62382787	62382788	chr2:62382788:T:C	rs77120722	T	C	T	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr2	62595755	62595756	chr2:62595756:A:G	rs6545963	A	G	A	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr2	62664544	62664545	chr2:62664545:C:T	rs75738774	C	T	C	Hoxd9_MA0913.1	13	0	-	0	0	.
chr2	63614646	63614647	chr2:63614647:G:A	rs548168478	G	A	g	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr2	64187680	64187681	chr2:64187681:A:G	rs2422115	A	G	G	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr2	64201512	64201513	chr2:64201513:T:C	rs144212180	T	C	T	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr2	64276760	64276761	chr2:64276761:A:C	rs2698530	A	C	A	Hoxd9_MA0913.1	5	1	-	7.932552609785828	1.7520598789997708	GCAGTTAAAA
chr2	64321898	64321899	chr2:64321899:T:C	rs930019	T	C	C	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr2	64323197	64323198	chr2:64323198:C:T	rs17740892	C	T	C	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr2	64330679	64330680	chr2:64330680:G:A	rs78824199	G	A	G	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr2	64523504	64523505	chr2:64523505:G:A	rs114243374	G	A	G	Hoxd9_MA0913.1	23	0	-	0	0	.
chr2	64888335	64888336	chr2:64888336:G:C	rs114129143	G	C	G	Hoxd9_MA0913.1	21	0	-	0	0	.
chr2	64920564	64920565	chr2:64920565:C:T	rs6738977	C	T	C	Hoxd9_MA0913.1	24	0	-	0	0	.
chr2	64992574	64992575	chr2:64992575:C:G	rs2268480	C	G	G	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr2	64992575	64992576	chr2:64992576:A:G	rs2268479	A	G	G	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr2	65131194	65131195	chr2:65131195:G:T	rs2422437	G	T	T	Hoxd9_MA0913.1	12	0	+	0	0	.
chr2	65257308	65257309	chr2:65257309:A:G	rs10865349	A	G	A	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr2	65489481	65489482	chr2:65489482:A:G	rs840947	A	G	A	Hoxd9_MA0913.1	15	0	-	0	0	.
chr2	65708022	65708023	chr2:65708023:C:T	rs17030670	C	T	T	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr2	65747098	65747099	chr2:65747099:G:C	rs6743531	G	C	C	Hoxd9_MA0913.1	10	0	+	0	0	.
chr2	65950146	65950147	chr2:65950147:G:A	rs115468098	G	A	G	Hoxd9_MA0913.1	10	0	+	0	0	.
chr2	66070473	66070474	chr2:66070474:T:C	rs11675929	T	C	T	Hoxd9_MA0913.1	3	1	-	8.282172881897674	6.454553941402571	CCAATTAAAA
chr2	66445101	66445102	chr2:66445102:T:C	rs748145015	T	C	T	Hoxd9_MA0913.1	27	0	-	0	0	.
chr2	66489459	66489460	chr2:66489460:C:T	rs7563565	C	T	C	Hoxd9_MA0913.1	21	0	-	0	0	.
chr2	66576816	66576817	chr2:66576817:C:G	rs6758907	C	G	G	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr2	66692571	66692572	chr2:66692572:G:A	rs1014299	G	A	G	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr2	66994728	66994729	chr2:66994729:T:A	rs34039401	T	A	T	Hoxd9_MA0913.1	13	0	+	0	0	.
chr2	67037831	67037832	chr2:67037832:G:T	rs2098390	G	T	T	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr2	67091664	67091665	chr2:67091665:A:G	rs11890661	A	G	A	Hoxd9_MA0913.1	10	0	-	0	0	.
chr2	67284178	67284179	chr2:67284179:T:G	rs143382697	T	G	T	Hoxd9_MA0913.1	2	1	-	8.334848631621252	7.4131794346509094	GCAATAAAAG
chr2	67284195	67284196	chr2:67284196:C:T	rs74576255	C	T	C	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr2	67339935	67339936	chr2:67339936:A:G	rs4671795	A	G	G	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr2	67477585	67477586	chr2:67477586:G:A	rs141311741	G	A	G	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr2	67564105	67564106	chr2:67564106:A:G	rs143472922	A	G	A	Hoxd9_MA0913.1	10	0	+	0	0	.
chr2	67936232	67936233	chr2:67936233:A:C	rs6740010	A	C	A	Hoxd9_MA0913.1	14	0	-	0	0	.
chr2	67966147	67966148	chr2:67966148:G:T	rs12713615	G	T	G	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr2	68223623	68223624	chr2:68223624:A:G	rs76823486	A	G	A	Hoxd9_MA0913.1	6	1	+	8.334848631621252	1.5194279638419104	GCAATAAAAG
chr2	68364945	68364946	chr2:68364946:G:A	rs11889922	G	A	A	Hoxd9_MA0913.1	1	1	-	8.323343304007485	7.97520767627846	CCAATAAAAA
chr2	68565843	68565844	chr2:68565844:G:A	rs6708116	G	A	A	Hoxd9_MA0913.1	1	1	-	7.83890107168488	7.490765443955856	GCGATTAAAT
chr2	68660944	68660945	chr2:68660945:C:T	rs67903406	C	T	C	Hoxd9_MA0913.1	21	0	-	0	0	.
chr2	68715876	68715877	chr2:68715877:G:T	rs553707534	G	T	G	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr2	68821150	68821151	chr2:68821151:C:T	rs4854460	C	T	C	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr2	68932054	68932055	chr2:68932055:T:C	rs145794729	T	C	T	Hoxd9_MA0913.1	8	1	+	8.32301137036169	7.801678332738202	GCAATAAATA
chr2	69020706	69020707	chr2:69020707:C:A	rs73934647	C	A	A	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr2	69144050	69144051	chr2:69144051:A:T	rs115809022	A	T	A	Hoxd9_MA0913.1	22	0	+	0	0	.
chr2	69344590	69344591	chr2:69344591:T:C	rs75696665	T	C	T	Hoxd9_MA0913.1	22	0	-	0	0	.
chr2	69463054	69463055	chr2:69463055:A:G	rs13427243	A	G	G	Hoxd9_MA0913.1	29	0	-	0	0	.
chr2	69471025	69471026	chr2:69471026:G:A	rs3552	G	A	A	Hoxd9_MA0913.1	10	0	-	0	0	.
chr2	69645259	69645260	chr2:69645260:G:A	rs114249228	G	A	G	Hoxd9_MA0913.1	18	0	+	0	0	.
chr2	69678267	69678268	chr2:69678268:C:G	rs6546540	C	G	G	Hoxd9_MA0913.1	0	1	-	8.246554688443613	6.768556020060355	GTCATTAAAT
chr2	69686069	69686070	chr2:69686070:G:A	rs72899494	G	A	A	Hoxd9_MA0913.1	12	0	-	0	0	.
chr2	69770233	69770234	chr2:69770234:A:C	rs115632610	A	C	A	Hoxd9_MA0913.1	17	0	+	0	0	.
chr2	69778040	69778041	chr2:69778041:T:G	rs35286755	T	G	T	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr2	69836527	69836528	chr2:69836528:A:G	rs4241261	A	G	G	Hoxd9_MA0913.1	19	0	-	0	0	.
chr2	69911868	69911869	chr2:69911869:A:G	rs6546556	A	G	G	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr2	70448574	70448575	chr2:70448575:T:G	rs11466297	T	G	T	Hoxd9_MA0913.1	20	0	+	0	0	.
chr2	70506393	70506394	chr2:70506394:T:C	rs404420	T	C	C	Hoxd9_MA0913.1	4	1	+	9.209394307523764	5.917260055748785	GTAATAAAAT
chr2	70627529	70627530	chr2:70627530:A:G	rs28844994	A	G	A	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr2	70687780	70687781	chr2:70687781:C:T	rs2074819	C	T	C	Hoxd9_MA0913.1	21	0	-	0	0	.
chr2	70748879	70748880	chr2:70748880:T:A	rs3771409	T	A	A	Hoxd9_MA0913.1	15	0	+	0	0	.
chr2	70764605	70764606	chr2:70764606:C:T	rs2863801	C	T	T	Hoxd9_MA0913.1	3	1	-	7.973723031895638	9.801341972390743	GCAGTAAAAA
chr2	70827967	70827968	chr2:70827968:G:C	rs1544652	G	C	G	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr2	71037379	71037380	chr2:71037380:T:C	rs185765727	T	C	.	Hoxd9_MA0913.1	20	0	-	0	0	.
chr2	71067905	71067906	chr2:71067906:G:A	chr2:71067906:G:A	G	A	.	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr2	71067923	71067924	chr2:71067924:A:C	rs2287329	A	C	.	Hoxd9_MA0913.1	17	0	+	0	0	.
chr2	71277745	71277746	chr2:71277746:G:T	rs151308540	G	T	G	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr2	71330982	71330983	chr2:71330983:G:A	rs2542489	G	A	G	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr2	71477173	71477174	chr2:71477174:G:A	rs57926327	G	A	G	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr2	71492101	71492102	chr2:71492102:T:C	rs79606529	T	C	T	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr2	71588699	71588700	chr2:71588700:C:A	rs78724767	C	A	C	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr2	71803340	71803341	chr2:71803341:A:G	rs6726307	A	G	A	Hoxd9_MA0913.1	21	0	+	0	0	.
chr2	72548378	72548379	chr2:72548379:G:C	rs146035464	G	C	G	Hoxd9_MA0913.1	11	0	+	0	0	.
chr2	72579658	72579659	chr2:72579659:A:C	rs1054309295	A	C	A	Hoxd9_MA0913.1	11	0	+	0	0	.
chr2	73360947	73360948	chr2:73360948:T:C	rs6720094	T	C	C	Hoxd9_MA0913.1	24	0	-	0	0	.
chr2	73917305	73917306	chr2:73917306:C:T	rs1653252	C	T	C	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr2	73952847	73952848	chr2:73952848:A:C	rs369336995	A	C	A	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr2	74013509	74013510	chr2:74013510:C:T	rs6714186	C	T	C	Hoxd9_MA0913.1	15	0	-	0	0	.
chr2	74096372	74096373	chr2:74096373:G:A	rs828869	G	A	G	Hoxd9_MA0913.1	0	1	+	8.879672775420401	7.931939052009941	GCCATAAAAA
chr2	74125279	74125280	chr2:74125280:C:T	rs828850	C	T	C	Hoxd9_MA0913.1	25	0	-	0	0	.
chr2	74532441	74532442	chr2:74532442:A:T	rs548291848	A	T	A	Hoxd9_MA0913.1	22	0	-	0	0	.
chr2	74645685	74645686	chr2:74645686:T:C	rs57326441	T	C	T	Hoxd9_MA0913.1	11	0	+	0	0	.
chr2	74742169	74742170	chr2:74742170:G:A	rs205613	G	A	A	Hoxd9_MA0913.1	15	0	+	0	0	.
chr2	75045159	75045160	chr2:75045160:A:C	rs774436241	A	C	A	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr2	75113653	75113654	chr2:75113654:A:G	rs7604270	A	G	G	Hoxd9_MA0913.1	9	1	-	9.51635951314298	8.678133135028622	GCAATTAAAT
chr2	75247167	75247168	chr2:75247168:T:A	rs17010950	T	A	T	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr2	75310138	75310139	chr2:75310139:G:A	chr2:75310139:G:A	G	A	G	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr2	75491693	75491694	chr2:75491694:G:A	rs72814783	G	A	G	Hoxd9_MA0913.1	28	0	-	0	0	.
chr2	75577152	75577153	chr2:75577153:A:G	rs12618642	A	G	A	Hoxd9_MA0913.1	11	0	-	0	0	.
chr2	75595427	75595428	chr2:75595428:C:T	rs7596821	C	T	T	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr2	75709849	75709850	chr2:75709850:C:G	rs6761400	C	G	G	Hoxd9_MA0913.1	1	1	+	8.853608248980283	5.761043236695571	ACAATAAAAA
chr2	76288894	76288895	chr2:76288895:C:T	rs1526620	C	T	T	Hoxd9_MA0913.1	11	0	+	0	0	.
chr2	76307540	76307541	chr2:76307541:A:G	rs112100936	A	G	A	Hoxd9_MA0913.1	20	0	+	0	0	.
chr2	76978364	76978365	chr2:76978365:T:C	rs78911088	T	C	T	Hoxd9_MA0913.1	3	1	-	9.55752993525279	7.7299109947576845	GCAATAAAAT
chr2	77458018	77458019	chr2:77458019:G:C	rs72811237	G	C	G	Hoxd9_MA0913.1	17	0	+	0	0	.
chr2	77779223	77779224	chr2:77779224:T:C	rs7595440	T	C	C	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr2	77873697	77873698	chr2:77873698:G:A	rs115454643	G	A	G	Hoxd9_MA0913.1	12	0	+	0	0	.
chr2	77873712	77873713	chr2:77873713:A:G	rs13388014	A	G	G	Hoxd9_MA0913.1	27	0	+	0	0	.
chr2	78363416	78363417	chr2:78363417:A:G	rs7606174	A	G	G	Hoxd9_MA0913.1	5	1	+	9.801341972390743	3.5796788194948737	GCAATAAAAA
chr2	78411151	78411152	chr2:78411152:T:C	rs34050937	T	C	T	Hoxd9_MA0913.1	8	1	-	9.55752993525279	7.984561357794846	GCAATAAAAT
chr2	78780274	78780275	chr2:78780275:C:T	rs74614141	C	T	C	Hoxd9_MA0913.1	10	0	+	0	0	.
chr2	78908684	78908685	chr2:78908685:C:A	rs12329204	C	A	A	Hoxd9_MA0913.1	12	0	+	0	0	.
chr2	79005055	79005056	chr2:79005056:C:T	rs13031947	C	T	T	Hoxd9_MA0913.1	12	0	-	0	0	.
chr2	80208089	80208090	chr2:80208090:A:C	rs74930382	A	C	A	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr2	80539911	80539912	chr2:80539912:T:C	rs9309560	T	C	C	Hoxd9_MA0913.1	12	0	+	0	0	.
chr2	81703356	81703357	chr2:81703357:G:C	rs1344969	G	C	G	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr2	81816719	81816720	chr2:81816720:A:G	rs10496255	A	G	A	Hoxd9_MA0913.1	8	1	+	8.490366725581566	6.917398148123624	GTCATTAAAA
chr2	81839994	81839995	chr2:81839995:C:T	rs4852641	C	T	c	Hoxd9_MA0913.1	23	0	+	0	0	.
chr2	82672918	82672919	chr2:82672919:A:G	rs12052614	A	G	G	Hoxd9_MA0913.1	16	0	+	0	0	.
chr2	83121912	83121913	chr2:83121913:C:A	rs28422877	C	A	c	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr2	83368922	83368923	chr2:83368923:G:A	rs116837964	G	A	a	Hoxd9_MA0913.1	19	0	+	0	0	.
chr2	83546937	83546938	chr2:83546938:C:A	rs113527045	C	A	C	Hoxd9_MA0913.1	21	0	+	0	0	.
chr2	83549576	83549577	chr2:83549577:G:A	rs532413367	G	A	G	Hoxd9_MA0913.1	29	0	-	0	0	.
chr2	83651139	83651140	chr2:83651140:A:T	rs6758461	A	T	A	Hoxd9_MA0913.1	22	0	-	0	0	.
chr2	83804069	83804070	chr2:83804070:C:T	rs13389880	C	T	T	Hoxd9_MA0913.1	14	0	-	0	0	.
chr2	84461582	84461583	chr2:84461583:G:A	rs57373283	G	A	g	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr2	84866366	84866367	chr2:84866367:A:G	rs72836497	A	G	A	Hoxd9_MA0913.1	14	0	+	0	0	.
chr2	84881939	84881940	chr2:84881940:C:T	rs181099071	C	T	C	Hoxd9_MA0913.1	0	1	-	8.293678209511443	7.34594448610098	GCAATTAAAG
chr2	84929201	84929202	chr2:84929202:C:T	rs115571103	C	T	-	Hoxd9_MA0913.1	21	0	+	0	0	.
chr2	84942295	84942296	chr2:84942296:G:A	rs6726213	G	A	N	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr2	85287058	85287059	chr2:85287059:G:A	rs188577398	G	A	G	Hoxd9_MA0913.1	20	0	-	0	0	.
chr2	85411199	85411200	chr2:85411200:A:G	rs11682055	A	G	G	Hoxd9_MA0913.1	17	0	+	0	0	.
chr2	85413543	85413544	chr2:85413544:C:T	rs142573475	C	T	C	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr2	85413549	85413550	chr2:85413550:A:T	rs146505632	A	T	A	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr2	85439293	85439294	chr2:85439294:G:T	rs187149368	G	T	G	Hoxd9_MA0913.1	10	0	-	0	0	.
chr2	85511292	85511293	chr2:85511293:T:C	rs72938587	T	C	T	Hoxd9_MA0913.1	18	0	-	0	0	.
chr2	85702550	85702551	chr2:85702551:C:T	rs4832186	C	T	C	Hoxd9_MA0913.1	17	0	-	0	0	.
chr2	85702551	85702552	chr2:85702552:A:G	rs4832187	A	G	T	Hoxd9_MA0913.1	16	0	-	0	0	.
chr2	85843762	85843763	chr2:85843763:C:T	rs113162712	C	T	C	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr2	85852005	85852006	chr2:85852006:T:G	rs17026684	T	G	T	Hoxd9_MA0913.1	12	0	+	0	0	.
chr2	85949100	85949101	chr2:85949101:G:A	rs6747424	G	A	A	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr2	85949134	85949135	chr2:85949135:T:C	rs6705122	T	C	T	Hoxd9_MA0913.1	17	0	+	0	0	.
chr2	86393856	86393857	chr2:86393857:A:C	rs76170745	A	C	A	Hoxd9_MA0913.1	17	0	-	0	0	.
chr2	86599147	86599148	chr2:86599148:T:C	rs56378606	T	C	T	Hoxd9_MA0913.1	5	1	-	9.801341972390743	3.5796788194948737	GCAATAAAAA
chr2	87025911	87025912	chr2:87025912:A:T	rs543375831	A	T	A	Hoxd9_MA0913.1	15	0	-	0	0	.
chr2	87825311	87825312	chr2:87825312:T:C	chr2:87825312:T:C	T	C	.	Hoxd9_MA0913.1	29	0	-	0	0	.
chr2	88471137	88471138	chr2:88471138:A:G	rs2015591	A	G	G	Hoxd9_MA0913.1	23	0	-	0	0	.
chr2	88729368	88729369	chr2:88729369:G:A	rs371893786	G	A	g	Hoxd9_MA0913.1	24	0	-	0	0	.
chr2	88859854	88859855	chr2:88859855:C:T	chr2:88859855:C:T	C	T	C	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr2	89763742	89763743	chr2:89763743:A:C	rs1485742850	A	C	.	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr2	90395761	90395762	chr2:90395762:C:A	rs6421805	C	A	.	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr2	90395798	90395799	chr2:90395799:G:A	rs150720374	G	A	.	Hoxd9_MA0913.1	27	0	+	0	0	.
chr2	91442321	91442322	chr2:91442322:C:T	rs1216989255	C	T	c	Hoxd9_MA0913.1	24	0	-	0	0	.
chr2	91599216	91599217	chr2:91599217:C:T	rs4927358	C	T	C	Hoxd9_MA0913.1	17	0	+	0	0	.
chr2	95010692	95010693	chr2:95010693:C:T	rs10445976	C	T	c	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr2	95875946	95875947	chr2:95875947:C:T	rs12053473	C	T	C	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr2	96552627	96552628	chr2:96552628:G:A	rs772693379	G	A	G	Hoxd9_MA0913.1	21	0	+	0	0	.
chr2	96552629	96552630	chr2:96552630:A:G	rs6576973	A	G	A	Hoxd9_MA0913.1	23	0	+	0	0	.
chr2	96794182	96794183	chr2:96794183:A:G	rs7608661	A	G	G	Hoxd9_MA0913.1	9	1	+	7.973723031895638	6.507229691126146	GCAGTAAAAA
chr2	96952834	96952835	chr2:96952835:C:T	rs1730130	C	T	C	Hoxd9_MA0913.1	14	0	-	0	0	.
chr2	97950651	97950652	chr2:97950652:C:T	rs114180239	C	T	c	Hoxd9_MA0913.1	0	1	-	9.412035922551908	8.464302199141448	GTAATTAAAA
chr2	98212343	98212344	chr2:98212344:T:C	rs13431656	T	C	C	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr2	98412926	98412927	chr2:98412927:C:T	rs1310330881	C	T	C	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr2	98518251	98518252	chr2:98518252:A:C	rs201153280	A	C	A	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr2	98691684	98691685	chr2:98691685:G:C	rs55633363	G	C	G	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr2	98726449	98726450	chr2:98726450:A:G	rs181670884	A	G	A	Hoxd9_MA0913.1	13	0	+	0	0	.
chr2	98932690	98932691	chr2:98932691:G:A	rs13397765	G	A	G	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr2	99087809	99087810	chr2:99087810:T:C	rs720229	T	C	T	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr2	99820349	99820350	chr2:99820350:G:A	rs62147569	G	A	G	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr2	99820380	99820381	chr2:99820381:C:T	rs6737418	C	T	C	Hoxd9_MA0913.1	15	0	+	0	0	.
chr2	100447086	100447087	chr2:100447087:A:G	rs750562	A	G	G	Hoxd9_MA0913.1	16	0	+	0	0	.
chr2	100661717	100661718	chr2:100661718:T:C	rs7590637	T	C	C	Hoxd9_MA0913.1	15	0	+	0	0	.
chr2	100997859	100997860	chr2:100997860:A:G	rs1374324	A	G	G	Hoxd9_MA0913.1	28	0	-	0	0	.
chr2	101083859	101083860	chr2:101083860:C:T	rs55674587	C	T	C	Hoxd9_MA0913.1	18	0	+	0	0	.
chr2	101113630	101113631	chr2:101113631:T:G	rs67087164	T	G	T	Hoxd9_MA0913.1	7	1	-	7.75646393805828	4.462617186339848	GCCATTAAAC
chr2	101114672	101114673	chr2:101114673:G:A	rs2165427	G	A	g	Hoxd9_MA0913.1	19	0	+	0	0	.
chr2	101359689	101359690	chr2:101359690:T:C	rs6751877	T	C	C	Hoxd9_MA0913.1	4	1	+	9.453206344661718	6.161072092886739	GTAATAAAAA
chr2	101421392	101421393	chr2:101421393:T:C	rs2280124	T	C	T	Hoxd9_MA0913.1	27	0	-	0	0	.
chr2	101451819	101451820	chr2:101451820:G:A	rs7598326	G	A	A	Hoxd9_MA0913.1	27	0	+	0	0	.
chr2	101587187	101587188	chr2:101587188:G:A	rs35476556	G	A	G	Hoxd9_MA0913.1	14	0	-	0	0	.
chr2	101622897	101622898	chr2:101622898:T:C	rs115027337	T	C	T	Hoxd9_MA0913.1	5	1	-	8.531537147691377	2.3098739947955087	GTCATAAAAA
chr2	101622900	101622901	chr2:101622901:G:A	rs17025894	G	A	G	Hoxd9_MA0913.1	2	1	-	8.531537147691377	3.002862312810936	GTCATAAAAA
chr2	101803378	101803379	chr2:101803379:G:T	rs58422173	G	T	G	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr2	101804278	101804279	chr2:101804279:G:A	rs116496488	G	A	G	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr2	101989360	101989361	chr2:101989361:C:A	rs13018457	C	A	C	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr2	102166894	102166895	chr2:102166895:G:T	rs2160227	G	T	G	Hoxd9_MA0913.1	24	0	+	0	0	.
chr2	102193399	102193400	chr2:102193400:G:T	rs10166535	G	T	G	Hoxd9_MA0913.1	26	0	-	0	0	.
chr2	102220204	102220205	chr2:102220205:A:T	rs17026825	A	T	A	Hoxd9_MA0913.1	9	1	-	9.55752993525279	9.801341972390743	GCAATAAAAT
chr2	102227484	102227485	chr2:102227485:T:G	rs9808460	T	G	T	Hoxd9_MA0913.1	7	1	-	8.490366725581566	5.196519973863136	GTCATTAAAA
chr2	102242029	102242030	chr2:102242030:A:T	rs72998585	A	T	A	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr2	102252379	102252380	chr2:102252380:T:C	rs12470560	T	C	T	Hoxd9_MA0913.1	28	0	+	0	0	.
chr2	102343546	102343547	chr2:102343547:G:A	rs12905	G	A	G	Hoxd9_MA0913.1	25	0	+	0	0	.
chr2	102389987	102389988	chr2:102389988:C:T	rs6749014	C	T	c	Hoxd9_MA0913.1	20	0	+	0	0	.
chr2	102668470	102668471	chr2:102668471:C:T	rs7604834	C	T	C	Hoxd9_MA0913.1	27	0	+	0	0	.
chr2	102841462	102841463	chr2:102841463:G:A	rs1280691750	G	A	G	Hoxd9_MA0913.1	13	0	+	0	0	.
chr2	103230583	103230584	chr2:103230584:C:T	rs10496368	C	T	C	Hoxd9_MA0913.1	21	0	-	0	0	.
chr2	103957658	103957659	chr2:103957659:C:G	rs150317777	C	G	C	Hoxd9_MA0913.1	15	0	+	0	0	.
chr2	104316306	104316307	chr2:104316307:C:T	rs539685184	C	T	C	Hoxd9_MA0913.1	19	0	+	0	0	.
chr2	104316307	104316308	chr2:104316308:G:A	rs141573580	G	A	G	Hoxd9_MA0913.1	20	0	+	0	0	.
chr2	104474913	104474914	chr2:104474914:A:T	rs75514605	A	T	A	Hoxd9_MA0913.1	23	0	-	0	0	.
chr2	105006823	105006824	chr2:105006824:C:T	rs7608499	C	T	T	Hoxd9_MA0913.1	13	0	+	0	0	.
chr2	105082480	105082481	chr2:105082481:G:A	rs3924669	G	A	A	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr2	105355690	105355691	chr2:105355691:T:C	rs13030653	T	C	T	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr2	105449048	105449049	chr2:105449049:A:G	rs884876	A	G	G	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr2	105508852	105508853	chr2:105508853:T:G	rs6729262	T	G	G	Hoxd9_MA0913.1	12	0	+	0	0	.
chr2	105592253	105592254	chr2:105592254:A:T	rs1170573490	A	T	A	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr2	105686019	105686020	chr2:105686020:T:C	rs79401192	T	C	T	Hoxd9_MA0913.1	28	0	+	0	0	.
chr2	105790036	105790037	chr2:105790037:G:T	chr2:105790037:G:T	G	T	G	Hoxd9_MA0913.1	27	0	-	0	0	.
chr2	105808654	105808655	chr2:105808655:G:A	rs4851092	G	A	A	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr2	105893727	105893728	chr2:105893728:C:T	rs62148194	C	T	C	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr2	105893734	105893735	chr2:105893735:T:G	rs200828017	T	G	T	Hoxd9_MA0913.1	4	1	+	8.2283733949328	4.93623914315782	GCAATAAAGA
chr2	105977413	105977414	chr2:105977414:G:A	rs74506447	G	A	G	Hoxd9_MA0913.1	15	0	+	0	0	.
chr2	106028420	106028421	chr2:106028421:T:C	chr2:106028421:T:C	T	C	T	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr2	106028453	106028454	chr2:106028454:C:T	rs1615827	C	T	C	Hoxd9_MA0913.1	29	0	+	0	0	.
chr2	106160938	106160939	chr2:106160939:T:C	rs34646608	T	C	T	Hoxd9_MA0913.1	28	0	+	0	0	.
chr2	106232925	106232926	chr2:106232926:C:T	rs12712247	C	T	c	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr2	106511088	106511089	chr2:106511089:T:A	rs148308041	T	A	t	Hoxd9_MA0913.1	28	0	+	0	0	.
chr2	106511089	106511090	chr2:106511090:C:G	rs7584087	C	G	c	Hoxd9_MA0913.1	29	0	+	0	0	.
chr2	106642581	106642582	chr2:106642582:G:C	rs12621185	G	C	C	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr2	106696080	106696081	chr2:106696081:T:C	rs11124128	T	C	T	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr2	106885288	106885289	chr2:106885289:C:T	rs34209723	C	T	C	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr2	106887912	106887913	chr2:106887913:G:T	rs10166025	G	T	T	Hoxd9_MA0913.1	0	1	+	8.594690316172638	5.5575476202197684	GCCATTAAAT
chr2	106887939	106887940	chr2:106887940:G:A	rs10166084	G	A	A	Hoxd9_MA0913.1	27	0	+	0	0	.
chr2	107163678	107163679	chr2:107163679:T:C	rs2971661	T	C	C	Hoxd9_MA0913.1	9	1	-	7.973723031895638	6.507229691126146	GCAGTAAAAA
chr2	107306740	107306741	chr2:107306741:C:T	rs6729086	C	T	C	Hoxd9_MA0913.1	11	0	+	0	0	.
chr2	107419121	107419122	chr2:107419122:G:A	rs191973284	G	A	G	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr2	107813150	107813151	chr2:107813151:A:G	rs17021788	A	G	.	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr2	108232924	108232925	chr2:108232925:T:C	rs2378098	T	C	N	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr2	108447897	108447898	chr2:108447898:G:A	rs2683804	G	A	-	Hoxd9_MA0913.1	12	0	-	0	0	.
chr2	108450075	108450076	chr2:108450076:T:C	rs76428482	T	C	T	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr2	108621598	108621599	chr2:108621599:C:G	rs114753473	C	G	C	Hoxd9_MA0913.1	16	0	+	0	0	.
chr2	108633610	108633611	chr2:108633611:A:G	rs12468001	A	G	A	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr2	108633618	108633619	chr2:108633619:G:C	rs1471642595	G	C	G	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr2	108633812	108633813	chr2:108633813:T:C	rs116197920	T	C	T	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr2	108633837	108633838	chr2:108633838:A:G	rs139249774	A	G	A	Hoxd9_MA0913.1	7	1	+	9.168223885413955	2.3290794080596116	GTAATTAAAT
chr2	108803440	108803441	chr2:108803441:A:T	rs186799043	A	T	a	Hoxd9_MA0913.1	15	0	-	0	0	.
chr2	108934110	108934111	chr2:108934111:G:A	rs187487635	G	A	G	Hoxd9_MA0913.1	0	1	+	9.760171550280933	8.812437826870472	GCAATTAAAA
chr2	109103647	109103648	chr2:109103648:G:A	rs11674549	G	A	G	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr2	109351099	109351100	chr2:109351100:G:A	rs938687920	G	A	A	Hoxd9_MA0913.1	14	0	-	0	0	.
chr2	109407696	109407697	chr2:109407697:C:A	rs3922817	C	A	C	Hoxd9_MA0913.1	0	1	-	9.168223885413955	6.131081189461085	GTAATTAAAT
chr2	109447459	109447460	chr2:109447460:G:T	rs141948666	G	T	g	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr2	110115273	110115274	chr2:110115274:G:A	rs17842650	G	A	C	Hoxd9_MA0913.1	17	0	+	0	0	.
chr2	110898056	110898057	chr2:110898057:T:C	rs28792074	T	C	T	Hoxd9_MA0913.1	20	0	-	0	0	.
chr2	110973274	110973275	chr2:110973275:C:T	rs59899855	C	T	C	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr2	111015792	111015793	chr2:111015793:A:G	rs1047832780	A	G	A	Hoxd9_MA0913.1	9	1	+	9.801341972390743	8.334848631621252	GCAATAAAAA
chr2	111029222	111029223	chr2:111029223:A:C	rs1184338133	A	C	A	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr2	111168548	111168549	chr2:111168549:T:G	rs138660090	T	G	T	Hoxd9_MA0913.1	11	0	+	0	0	.
chr2	111530896	111530897	chr2:111530897:C:T	rs192945747	C	T	C	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr2	111570300	111570301	chr2:111570301:G:C	rs3866183	G	C	G	Hoxd9_MA0913.1	28	0	+	0	0	.
chr2	111602270	111602271	chr2:111602271:T:A	rs149220589	T	A	T	Hoxd9_MA0913.1	25	0	+	0	0	.
chr2	111701356	111701357	chr2:111701357:G:A	rs3898028	G	A	G	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr2	111712163	111712164	chr2:111712164:C:G	rs58951347	C	G	C	Hoxd9_MA0913.1	27	0	+	0	0	.
chr2	112024037	112024038	chr2:112024038:G:T	rs71414619	G	T	G	Hoxd9_MA0913.1	10	0	-	0	0	.
chr2	112049060	112049061	chr2:112049061:C:G	chr2:112049061:C:G	C	G	C	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr2	112074084	112074085	chr2:112074085:G:A	rs7568022	G	A	A	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr2	112279261	112279262	chr2:112279262:G:C	rs13001618	G	C	G	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr2	112471210	112471211	chr2:112471211:C:T	rs62157489	C	T	.	Hoxd9_MA0913.1	26	0	+	0	0	.
chr2	112706917	112706918	chr2:112706918:C:T	rs6542080	C	T	C	Hoxd9_MA0913.1	29	0	+	0	0	.
chr2	112836809	112836810	chr2:112836810:G:A	rs1143627	G	A	G	Hoxd9_MA0913.1	2	1	-	8.879672775420401	3.3509979405399606	GCCATAAAAA
chr2	113068494	113068495	chr2:113068495:T:G	rs6755354	T	G	T	Hoxd9_MA0913.1	7	1	-	8.60979621184233	5.315949460123898	ACAATAAAAT
chr2	113103983	113103984	chr2:113103984:G:A	rs13406085	G	A	G	Hoxd9_MA0913.1	1	1	-	8.879672775420401	8.531537147691377	GCCATAAAAA
chr2	113351777	113351778	chr2:113351778:C:T	rs4618068	C	T	.	Hoxd9_MA0913.1	26	0	-	0	0	.
chr2	113351801	113351802	chr2:113351802:C:T	rs1867866	C	T	.	Hoxd9_MA0913.1	2	1	-	8.123883530932645	9.801341972390743	GCGATAAAAA
chr2	113387358	113387359	chr2:113387359:T:C	rs6728162	T	C	.	Hoxd9_MA0913.1	10	0	-	0	0	.
chr2	113697752	113697753	chr2:113697753:A:G	rs78460688	A	G	A	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr2	113790532	113790533	chr2:113790533:C:T	rs3870303	C	T	C	Hoxd9_MA0913.1	14	0	-	0	0	.
chr2	113969054	113969055	chr2:113969055:C:A	rs77742501	C	A	C	Hoxd9_MA0913.1	28	0	-	0	0	.
chr2	114022432	114022433	chr2:114022433:A:G	rs181201278	A	G	A	Hoxd9_MA0913.1	29	0	+	0	0	.
chr2	114633909	114633910	chr2:114633910:C:T	rs76305172	C	T	C	Hoxd9_MA0913.1	24	0	-	0	0	.
chr2	114935163	114935164	chr2:114935164:T:C	rs62167695	T	C	T	Hoxd9_MA0913.1	6	1	-	9.168223885413955	2.352803217634614	GTAATTAAAT
chr2	115065264	115065265	chr2:115065265:T:C	rs17043967	T	C	C	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr2	115415607	115415608	chr2:115415608:C:G	rs34790955	C	G	C	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr2	115569865	115569866	chr2:115569866:A:T	rs77333254	A	T	A	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr2	116617635	116617636	chr2:116617636:G:A	rs7598642	G	A	G	Hoxd9_MA0913.1	17	0	-	0	0	.
chr2	117761242	117761243	chr2:117761243:A:G	rs7559497	A	G	A	Hoxd9_MA0913.1	3	1	+	8.32301137036169	6.4953924298665875	GCAATAAATA
chr2	117761264	117761265	chr2:117761265:T:C	rs169493	T	C	C	Hoxd9_MA0913.1	25	0	+	0	0	.
chr2	117966856	117966857	chr2:117966857:T:C	rs59302358	T	C	T	Hoxd9_MA0913.1	3	1	-	8.187202972822991	6.359584032327886	GCAATTAAGA
chr2	118124050	118124051	chr2:118124051:G:A	rs145739755	G	A	G	Hoxd9_MA0913.1	17	0	-	0	0	.
chr2	118124057	118124058	chr2:118124058:A:G	rs138206861	A	G	A	Hoxd9_MA0913.1	10	0	-	0	0	.
chr2	118223487	118223488	chr2:118223488:G:T	rs1486148580	G	T	G	Hoxd9_MA0913.1	26	0	+	0	0	.
chr2	118224457	118224458	chr2:118224458:A:G	rs6715039	A	G	A	Hoxd9_MA0913.1	2	1	+	7.801678332738202	6.124219891280104	GCAATAAACA
chr2	118251606	118251607	chr2:118251607:T:G	rs17047916	T	G	T	Hoxd9_MA0913.1	17	0	+	0	0	.
chr2	118373184	118373185	chr2:118373185:T:C	chr2:118373185:T:C	T	C	T	Hoxd9_MA0913.1	24	0	-	0	0	.
chr2	118481947	118481948	chr2:118481948:G:A	rs6542466	G	A	A	Hoxd9_MA0913.1	29	0	-	0	0	.
chr2	118751593	118751594	chr2:118751594:G:T	rs7568084	G	T	G	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr2	118840637	118840638	chr2:118840638:A:G	rs4849727	A	G	A	Hoxd9_MA0913.1	2	1	+	7.984561357794846	6.307102916336748	GCAATAAAGT
chr2	118849893	118849894	chr2:118849894:C:A	rs893572	C	A	C	Hoxd9_MA0913.1	27	0	-	0	0	.
chr2	118870124	118870125	chr2:118870125:A:G	rs11895387	A	G	A	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr2	118880569	118880570	chr2:118880570:C:G	rs113032687	C	G	G	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr2	118882681	118882682	chr2:118882682:C:G	rs567483136	C	G	C	Hoxd9_MA0913.1	17	0	-	0	0	.
chr2	119463744	119463745	chr2:119463745:A:T	rs2253878	A	T	A	Hoxd9_MA0913.1	18	0	-	0	0	.
chr2	120117651	120117652	chr2:120117652:C:G	rs6760143	C	G	C	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr2	120546790	120546791	chr2:120546791:T:A	rs6726987	T	A	A	Hoxd9_MA0913.1	29	0	+	0	0	.
chr2	121071088	121071089	chr2:121071089:G:C	rs192953220	G	C	G	Hoxd9_MA0913.1	0	1	-	8.282172881897674	9.760171550280933	CCAATTAAAA
chr2	121540222	121540223	chr2:121540223:G:A	rs184719386	G	A	G	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr2	121648214	121648215	chr2:121648215:A:G	chr2:121648215:A:G	A	G	A	Hoxd9_MA0913.1	11	0	+	0	0	.
chr2	121727375	121727376	chr2:121727376:T:C	rs116084393	T	C	T	Hoxd9_MA0913.1	3	1	-	8.293678209511443	6.466059269016337	GCAATTAAAG
chr2	121727389	121727390	chr2:121727390:A:G	rs17016977	A	G	A	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr2	121820366	121820367	chr2:121820367:A:G	rs7576954	A	G	A	Hoxd9_MA0913.1	20	0	-	0	0	.
chr2	122329544	122329545	chr2:122329545:G:T	rs6707005	G	T	G	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr2	122329553	122329554	chr2:122329554:A:C	rs79581069	A	C	C	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr2	122335599	122335600	chr2:122335600:A:G	rs1320872	A	G	G	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr2	122865032	122865033	chr2:122865033:T:C	rs294644	T	C	C	Hoxd9_MA0913.1	13	0	-	0	0	.
chr2	122905692	122905693	chr2:122905693:C:A	rs138855237	C	A	N	Hoxd9_MA0913.1	24	0	-	0	0	.
chr2	122905713	122905714	chr2:122905714:T:C	rs1850585	T	C	t	Hoxd9_MA0913.1	3	1	-	8.635860738282448	6.8082417977873435	GCCATAAAAT
chr2	123061396	123061397	chr2:123061397:A:G	rs1395931	A	G	A	Hoxd9_MA0913.1	27	0	-	0	0	.
chr2	123074286	123074287	chr2:123074287:G:A	rs4392263	G	A	-	Hoxd9_MA0913.1	29	0	-	0	0	.
chr2	123074329	123074330	chr2:123074330:T:C	rs1605496	T	C	C	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr2	123356170	123356171	chr2:123356171:G:T	rs62167128	G	T	G	Hoxd9_MA0913.1	11	0	+	0	0	.
chr2	124029559	124029560	chr2:124029560:T:C	rs12622875	T	C	T	Hoxd9_MA0913.1	22	0	-	0	0	.
chr2	124060902	124060903	chr2:124060903:A:G	rs17010800	A	G	A	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr2	124329200	124329201	chr2:124329201:C:G	rs114492753	C	G	C	Hoxd9_MA0913.1	17	0	-	0	0	.
chr2	124534247	124534248	chr2:124534248:G:A	rs142332089	G	A	G	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr2	124534259	124534260	chr2:124534260:C:T	rs13021885	C	T	C	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr2	124573548	124573549	chr2:124573549:T:C	rs10445861	T	C	T	Hoxd9_MA0913.1	6	1	-	9.51635951314298	2.7009388453636385	GCAATTAAAT
chr2	124678254	124678255	chr2:124678255:G:A	rs72845874	G	A	A	Hoxd9_MA0913.1	29	0	+	0	0	.
chr2	125415746	125415747	chr2:125415747:T:C	rs1436301	T	C	C	Hoxd9_MA0913.1	9	1	-	9.801341972390743	8.334848631621252	GCAATAAAAA
chr2	125910288	125910289	chr2:125910289:T:C	rs2124311	T	C	C	Hoxd9_MA0913.1	4	1	+	9.51635951314298	6.224225261367999	GCAATTAAAT
chr2	125962033	125962034	chr2:125962034:C:T	rs12711723	C	T	c	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr2	125962057	125962058	chr2:125962058:G:A	rs72845348	G	A	g	Hoxd9_MA0913.1	11	0	+	0	0	.
chr2	125962061	125962062	chr2:125962062:G:A	rs12711725	G	A	a	Hoxd9_MA0913.1	15	0	+	0	0	.
chr2	126519111	126519112	chr2:126519112:T:C	rs7578810	T	C	T	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr2	126745880	126745881	chr2:126745881:A:G	rs11674717	A	G	A	Hoxd9_MA0913.1	26	0	+	0	0	.
chr2	126765540	126765541	chr2:126765541:A:G	rs12328974	A	G	A	Hoxd9_MA0913.1	25	0	+	0	0	.
chr2	126897051	126897052	chr2:126897052:A:G	rs146089646	A	G	A	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr2	126899280	126899281	chr2:126899281:G:A	rs61730218	G	A	g	Hoxd9_MA0913.1	11	0	+	0	0	.
chr2	126899284	126899285	chr2:126899285:C:T	rs61730220	C	T	C	Hoxd9_MA0913.1	15	0	+	0	0	.
chr2	126926173	126926174	chr2:126926174:A:G	rs28771148	A	G	A	Hoxd9_MA0913.1	29	0	-	0	0	.
chr2	127021946	127021947	chr2:127021947:A:G	rs59338031	A	G	G	Hoxd9_MA0913.1	19	0	-	0	0	.
chr2	127087098	127087099	chr2:127087099:T:C	rs79204380	T	C	T	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr2	127087125	127087126	chr2:127087126:G:C	chr2:127087126:G:C	G	C	G	Hoxd9_MA0913.1	13	0	+	0	0	.
chr2	127155591	127155592	chr2:127155592:T:C	rs11890913	T	C	T	Hoxd9_MA0913.1	28	0	+	0	0	.
chr2	127376405	127376406	chr2:127376406:C:T	rs536514045	C	T	C	Hoxd9_MA0913.1	27	0	+	0	0	.
chr2	127671246	127671247	chr2:127671247:C:T	rs34956512	C	T	c	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr2	127677307	127677308	chr2:127677308:A:G	rs6430944	A	G	G	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr2	127831476	127831477	chr2:127831477:G:A	rs35591811	G	A	G	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr2	127906504	127906505	chr2:127906505:C:A	rs1051531869	C	A	C	Hoxd9_MA0913.1	9	1	+	8.329997507299597	9.412035922551908	GTAATTAAAC
chr2	128164420	128164421	chr2:128164421:C:G	rs2122115	C	G	C	Hoxd9_MA0913.1	28	0	+	0	0	.
chr2	128273177	128273178	chr2:128273178:C:T	rs116476445	C	T	C	Hoxd9_MA0913.1	17	0	+	0	0	.
chr2	128379981	128379982	chr2:128379982:A:G	rs2043875	A	G	A	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr2	128379994	128379995	chr2:128379995:G:A	rs79229635	G	A	G	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr2	128439201	128439202	chr2:128439202:G:A	rs55829799	G	A	G	Hoxd9_MA0913.1	24	0	+	0	0	.
chr2	128622315	128622316	chr2:128622316:C:T	rs549073484	C	T	C	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr2	128774245	128774246	chr2:128774246:A:T	rs6758916	A	T	G	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr2	128842339	128842340	chr2:128842340:G:T	rs4662850	G	T	G	Hoxd9_MA0913.1	22	0	-	0	0	.
chr2	129457079	129457080	chr2:129457080:T:C	rs1031430	T	C	C	Hoxd9_MA0913.1	14	0	+	0	0	.
chr2	129644775	129644776	chr2:129644776:C:T	rs1541355	C	T	C	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr2	130896882	130896883	chr2:130896883:G:A	rs6759753	G	A	G	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr2	131034570	131034571	chr2:131034571:A:G	rs2059420	A	G	G	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr2	131482935	131482936	chr2:131482936:C:A	rs3817560	C	A	A	Hoxd9_MA0913.1	28	0	+	0	0	.
chr2	131549027	131549028	chr2:131549028:T:C	rs142263236	T	C	.	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr2	131683518	131683519	chr2:131683519:G:C	rs34909577	G	C	.	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr2	131924582	131924583	chr2:131924583:A:G	rs7561718	A	G	a	Hoxd9_MA0913.1	14	0	-	0	0	.
chr2	132489232	132489233	chr2:132489233:G:A	rs6430356	G	A	A	Hoxd9_MA0913.1	17	0	-	0	0	.
chr2	132608032	132608033	chr2:132608033:T:A	rs59886339	T	A	A	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr2	132608035	132608036	chr2:132608036:G:A	rs72841247	G	A	G	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr2	132668338	132668339	chr2:132668339:C:T	rs2709533	C	T	C	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr2	132754187	132754188	chr2:132754188:C:T	rs7595365	C	T	T	Hoxd9_MA0913.1	19	0	-	0	0	.
chr2	132754597	132754598	chr2:132754598:C:T	rs10167909	C	T	C	Hoxd9_MA0913.1	8	1	+	7.801678332738202	8.32301137036169	GCAATAAACA
chr2	132860361	132860362	chr2:132860362:G:A	rs548502490	G	A	G	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr2	132975464	132975465	chr2:132975465:T:A	rs79850677	T	A	T	Hoxd9_MA0913.1	11	0	-	0	0	.
chr2	133194467	133194468	chr2:133194468:G:A	rs12691834	G	A	A	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr2	133416460	133416461	chr2:133416461:A:G	rs10180047	A	G	G	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr2	133579709	133579710	chr2:133579710:C:G	rs75298337	C	G	C	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr2	133777577	133777578	chr2:133777578:A:T	rs13032581	A	T	A	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr2	133805904	133805905	chr2:133805905:C:T	rs16829491	C	T	C	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr2	133821584	133821585	chr2:133821585:C:A	rs62166134	C	A	C	Hoxd9_MA0913.1	20	0	+	0	0	.
chr2	133829886	133829887	chr2:133829887:T:C	rs35439713	T	C	T	Hoxd9_MA0913.1	9	1	-	8.281840948251881	6.81534760748239	GCAATTAATA
chr2	133919502	133919503	chr2:133919503:C:G	rs6723265	C	G	G	Hoxd9_MA0913.1	19	0	+	0	0	.
chr2	134089811	134089812	chr2:134089812:C:T	rs10193682	C	T	C	Hoxd9_MA0913.1	23	0	-	0	0	.
chr2	134181939	134181940	chr2:134181940:A:G	rs11897876	A	G	G	Hoxd9_MA0913.1	21	0	+	0	0	.
chr2	134199227	134199228	chr2:134199228:C:A	rs114122700	C	A	C	Hoxd9_MA0913.1	0	1	-	8.187202972822991	5.150060276870121	GCAATTAAGA
chr2	134398439	134398440	chr2:134398440:G:C	rs16830541	G	C	g	Hoxd9_MA0913.1	14	0	-	0	0	.
chr2	134418054	134418055	chr2:134418055:T:A	rs1530232	T	A	T	Hoxd9_MA0913.1	7	1	-	8.490366725581566	5.196519973863136	GTCATTAAAA
chr2	135210142	135210143	chr2:135210143:T:C	rs189668138	T	C	T	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr2	135745586	135745587	chr2:135745587:A:G	rs1438304	A	G	A	Hoxd9_MA0913.1	10	0	+	0	0	.
chr2	135897117	135897118	chr2:135897118:C:A	chr2:135897118:C:A	C	A	C	Hoxd9_MA0913.1	0	1	-	9.168223885413955	6.131081189461085	GTAATTAAAT
chr2	136006414	136006415	chr2:136006415:T:C	rs940667196	T	C	T	Hoxd9_MA0913.1	5	1	-	8.60979621184233	2.388133058946461	ACAATAAAAT
chr2	136226766	136226767	chr2:136226767:A:G	rs4619664	A	G	G	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr2	136356550	136356551	chr2:136356551:G:A	rs11890732	G	A	g	Hoxd9_MA0913.1	26	0	+	0	0	.
chr2	136385044	136385045	chr2:136385045:C:T	rs189667140	C	T	C	Hoxd9_MA0913.1	19	0	+	0	0	.
chr2	136483883	136483884	chr2:136483884:A:G	rs643821	A	G	G	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr2	137117359	137117360	chr2:137117360:G:T	rs10490742	G	T	G	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr2	137339633	137339634	chr2:137339634:G:A	rs4954498	G	A	G	Hoxd9_MA0913.1	23	0	+	0	0	.
chr2	137467028	137467029	chr2:137467029:C:T	rs1453291	C	T	c	Hoxd9_MA0913.1	23	0	+	0	0	.
chr2	137910773	137910774	chr2:137910774:A:C	rs191743655	A	C	A	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr2	138016502	138016503	chr2:138016503:C:T	rs4954945	C	T	C	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr2	139183426	139183427	chr2:139183427:G:A	rs10208617	G	A	G	Hoxd9_MA0913.1	19	0	+	0	0	.
chr2	139587402	139587403	chr2:139587403:C:A	rs1446391	C	A	A	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr2	139588486	139588487	chr2:139588487:C:A	rs10198276	C	A	C	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr2	139623059	139623060	chr2:139623060:G:C	rs13035482	G	C	G	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr2	140181392	140181393	chr2:140181393:C:T	rs79863418	C	T	C	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr2	140663817	140663818	chr2:140663818:G:A	rs75701033	G	A	A	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr2	141707797	141707798	chr2:141707798:C:T	rs79322422	C	T	C	Hoxd9_MA0913.1	27	0	+	0	0	.
chr2	141726688	141726689	chr2:141726689:A:G	rs13009867	A	G	A	Hoxd9_MA0913.1	22	0	+	0	0	.
chr2	142104209	142104210	chr2:142104210:G:A	rs144444542	G	A	G	Hoxd9_MA0913.1	29	0	-	0	0	.
chr2	142127722	142127723	chr2:142127723:T:C	rs1449486	T	C	c	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr2	142175902	142175903	chr2:142175903:C:G	rs72852667	C	G	C	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr2	142334272	142334273	chr2:142334273:T:C	rs72988228	T	C	T	Hoxd9_MA0913.1	9	1	+	8.246554688443613	7.408328310329255	GTCATTAAAT
chr2	142814808	142814809	chr2:142814809:T:C	rs6736433	T	C	C	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr2	142844933	142844934	chr2:142844934:T:C	rs13027801	T	C	C	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr2	142895456	142895457	chr2:142895457:A:T	rs6711280	A	T	A	Hoxd9_MA0913.1	17	0	-	0	0	.
chr2	142945007	142945008	chr2:142945008:A:G	rs35886408	A	G	A	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr2	142994050	142994051	chr2:142994051:G:T	rs352874	G	T	T	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr2	143078178	143078179	chr2:143078179:C:G	rs79916852	C	G	C	Hoxd9_MA0913.1	20	0	+	0	0	.
chr2	143428975	143428976	chr2:143428976:T:G	rs13011344	T	G	T	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr2	143480376	143480377	chr2:143480377:T:C	rs141243060	T	C	T	Hoxd9_MA0913.1	0	1	-	8.812437826870472	9.760171550280933	ACAATTAAAA
chr2	143520636	143520637	chr2:143520637:A:G	rs11679529	A	G	A	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr2	143587080	143587081	chr2:143587081:C:T	rs67182475	C	T	C	Hoxd9_MA0913.1	26	0	+	0	0	.
chr2	143607306	143607307	chr2:143607307:C:T	rs13389286	C	T	C	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr2	143830173	143830174	chr2:143830174:A:G	rs10209234	A	G	G	Hoxd9_MA0913.1	12	0	-	0	0	.
chr2	144048247	144048248	chr2:144048248:A:G	rs7602624	A	G	G	Hoxd9_MA0913.1	2	1	+	8.281840948251881	6.604382506793783	GCAATTAATA
chr2	144157405	144157406	chr2:144157406:T:C	rs186679197	T	C	T	Hoxd9_MA0913.1	21	0	+	0	0	.
chr2	144324009	144324010	chr2:144324010:C:T	rs111567851	C	T	C	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr2	144330438	144330439	chr2:144330439:C:T	rs11891991	C	T	T	Hoxd9_MA0913.1	24	0	+	0	0	.
chr2	144330695	144330696	chr2:144330696:G:A	rs36006777	G	A	G	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr2	144464889	144464890	chr2:144464890:A:T	chr2:144464890:A:T	A	T	A	Hoxd9_MA0913.1	18	0	+	0	0	.
chr2	144495161	144495162	chr2:144495162:T:G	rs6761789	T	G	T	Hoxd9_MA0913.1	2	1	-	9.801341972390743	8.879672775420401	GCAATAAAAA
chr2	144606788	144606789	chr2:144606789:A:G	rs1346343	A	G	A	Hoxd9_MA0913.1	2	1	+	9.760171550280933	8.082713108822833	GCAATTAAAA
chr2	144806477	144806478	chr2:144806478:A:G	rs1483491	A	G	A	Hoxd9_MA0913.1	8	1	+	7.7976343601680895	6.224665782710147	GCCATAAAAC
chr2	144865629	144865630	chr2:144865630:G:C	rs11682590	G	C	G	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr2	144946487	144946488	chr2:144946488:C:T	rs10201023	C	T	C	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr2	144947911	144947912	chr2:144947912:G:A	rs786236	G	A	G	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr2	145117721	145117722	chr2:145117722:C:T	rs1997287	C	T	T	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr2	145279995	145279996	chr2:145279996:T:C	rs895219	T	C	T	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr2	145361449	145361450	chr2:145361450:G:A	rs1533426	G	A	G	Hoxd9_MA0913.1	1	1	-	9.55752993525279	9.209394307523764	GCAATAAAAT
chr2	145984815	145984816	chr2:145984816:C:A	rs16825866	C	A	c	Hoxd9_MA0913.1	18	0	+	0	0	.
chr2	146125360	146125361	chr2:146125361:T:C	chr2:146125361:T:C	T	C	T	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr2	146315798	146315799	chr2:146315799:T:C	rs74368883	T	C	T	Hoxd9_MA0913.1	16	0	-	0	0	.
chr2	146920813	146920814	chr2:146920814:A:G	rs11683218	A	G	G	Hoxd9_MA0913.1	15	0	-	0	0	.
chr2	146986243	146986244	chr2:146986244:C:T	rs116581888	C	T	C	Hoxd9_MA0913.1	0	1	-	8.287725110553424	7.3399913871429625	GTCATAAAAT
chr2	147441304	147441305	chr2:147441305:T:C	rs12469954	T	C	T	Hoxd9_MA0913.1	3	1	-	8.282172881897674	6.454553941402571	CCAATTAAAA
chr2	147511752	147511753	chr2:147511753:A:G	rs1438860	A	G	A	Hoxd9_MA0913.1	25	0	+	0	0	.
chr2	148305943	148305944	chr2:148305944:C:T	rs12470061	C	T	C	Hoxd9_MA0913.1	18	0	-	0	0	.
chr2	148745190	148745191	chr2:148745191:A:G	rs16829220	A	G	G	Hoxd9_MA0913.1	4	1	-	8.082713108822833	4.790578857047855	GCGATTAAAA
chr2	148909411	148909412	chr2:148909412:T:G	rs72866027	T	G	T	Hoxd9_MA0913.1	18	0	-	0	0	.
chr2	149057412	149057413	chr2:149057413:C:A	rs1917583	C	A	A	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr2	149069947	149069948	chr2:149069948:G:T	rs12997550	G	T	G	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr2	149167772	149167773	chr2:149167773:G:A	rs114438199	G	A	G	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr2	149218569	149218570	chr2:149218570:T:G	rs7577889	T	G	T	Hoxd9_MA0913.1	22	0	-	0	0	.
chr2	149463682	149463683	chr2:149463683:C:T	rs1196655	C	T	C	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr2	149878330	149878331	chr2:149878331:T:A	rs7608072	T	A	T	Hoxd9_MA0913.1	12	0	+	0	0	.
chr2	150176805	150176806	chr2:150176806:C:A	rs2044440	C	A	C	Hoxd9_MA0913.1	28	0	+	0	0	.
chr2	150272335	150272336	chr2:150272336:C:G	rs140220217	C	G	C	Hoxd9_MA0913.1	19	0	-	0	0	.
chr2	150426444	150426445	chr2:150426445:T:G	rs2053496	T	G	T	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr2	150610079	150610080	chr2:150610080:A:C	rs16828378	A	C	A	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr2	150640172	150640173	chr2:150640173:C:T	rs55728462	C	T	C	Hoxd9_MA0913.1	14	0	-	0	0	.
chr2	150640951	150640952	chr2:150640952:T:G	rs2341084	T	G	G	Hoxd9_MA0913.1	21	0	-	0	0	.
chr2	150812860	150812861	chr2:150812861:G:A	rs1519775	G	A	G	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr2	150917130	150917131	chr2:150917131:T:C	rs114329316	T	C	T	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr2	150971921	150971922	chr2:150971922:T:C	rs12995627	T	C	T	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr2	151083970	151083971	chr2:151083971:T:G	rs34108761	T	G	T	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr2	151337718	151337719	chr2:151337719:C:T	rs11682727	C	T	C	Hoxd9_MA0913.1	27	0	-	0	0	.
chr2	151539825	151539826	chr2:151539826:A:G	rs9287981	A	G	G	Hoxd9_MA0913.1	13	0	+	0	0	.
chr2	151849803	151849804	chr2:151849804:T:G	rs6433680	T	G	T	Hoxd9_MA0913.1	17	0	-	0	0	.
chr2	152038683	152038684	chr2:152038684:G:A	rs16830650	G	A	G	Hoxd9_MA0913.1	21	0	+	0	0	.
chr2	152307999	152308000	chr2:152308000:G:A	rs2345876	G	A	G	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr2	152322455	152322456	chr2:152322456:C:T	rs6747548	C	T	C	Hoxd9_MA0913.1	0	1	-	9.453206344661718	8.505472621251258	GTAATAAAAA
chr2	152348523	152348524	chr2:152348524:C:T	rs34424354	C	T	C	Hoxd9_MA0913.1	0	1	-	8.281840948251881	7.334107224841421	GCAATTAATA
chr2	152388972	152388973	chr2:152388973:G:A	rs10931079	G	A	A	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr2	152457689	152457690	chr2:152457690:T:C	rs10193625	T	C	T	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr2	152757844	152757845	chr2:152757845:G:C	rs13419134	G	C	G	Hoxd9_MA0913.1	25	0	+	0	0	.
chr2	153077499	153077500	chr2:153077500:C:G	rs13398106	C	G	G	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr2	153476362	153476363	chr2:153476363:T:C	rs60565585	T	C	T	Hoxd9_MA0913.1	16	0	-	0	0	.
chr2	153601977	153601978	chr2:153601978:C:T	rs13390312	C	T	C	Hoxd9_MA0913.1	12	0	+	0	0	.
chr2	154376287	154376288	chr2:154376288:A:C	rs6435170	A	C	a	Hoxd9_MA0913.1	19	0	-	0	0	.
chr2	154401670	154401671	chr2:154401671:G:C	rs2194380	G	C	C	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr2	154447456	154447457	chr2:154447457:G:A	rs13032771	G	A	G	Hoxd9_MA0913.1	29	0	+	0	0	.
chr2	154713836	154713837	chr2:154713837:T:C	rs114014708	T	C	T	Hoxd9_MA0913.1	28	0	-	0	0	.
chr2	154792008	154792009	chr2:154792009:A:G	rs2652442	A	G	A	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr2	155210444	155210445	chr2:155210445:T:C	rs1547524	T	C	C	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr2	155335377	155335378	chr2:155335378:G:A	rs1486065	G	A	G	Hoxd9_MA0913.1	16	0	-	0	0	.
chr2	155369295	155369296	chr2:155369296:G:A	rs10932477	G	A	G	Hoxd9_MA0913.1	16	0	+	0	0	.
chr2	155965792	155965793	chr2:155965793:C:G	rs35487612	C	G	C	Hoxd9_MA0913.1	20	0	-	0	0	.
chr2	156058029	156058030	chr2:156058030:T:A	rs66958420	T	A	A	Hoxd9_MA0913.1	12	0	+	0	0	.
chr2	156401296	156401297	chr2:156401297:T:C	rs1053241617	T	C	T	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr2	156485929	156485930	chr2:156485930:G:A	rs298224	G	A	G	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr2	157662092	157662093	chr2:157662093:T:G	rs6736379	T	G	T	Hoxd9_MA0913.1	6	1	-	7.973723031895638	3.499146169227434	GCAGTAAAAA
chr2	157777776	157777777	chr2:157777777:G:A	rs1146037	G	A	A	Hoxd9_MA0913.1	15	0	-	0	0	.
chr2	157848604	157848605	chr2:157848605:G:A	rs7563276	G	A	G	Hoxd9_MA0913.1	17	0	+	0	0	.
chr2	157932781	157932782	chr2:157932782:T:A	rs34379036	T	A	T	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr2	157962284	157962285	chr2:157962285:A:G	rs11686202	A	G	A	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr2	158197769	158197770	chr2:158197770:C:T	rs78719464	C	T	C	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr2	158644574	158644575	chr2:158644575:A:C	rs2528576	A	C	C	Hoxd9_MA0913.1	23	0	+	0	0	.
chr2	158651224	158651225	chr2:158651225:A:G	rs111829602	A	G	A	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr2	158735973	158735974	chr2:158735974:A:G	rs2528634	A	G	A	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr2	158889196	158889197	chr2:158889197:A:G	rs112538318	A	G	A	Hoxd9_MA0913.1	9	1	+	8.853608248980283	7.387114908210791	ACAATAAAAA
chr2	158927061	158927062	chr2:158927062:G:A	rs111981650	G	A	G	Hoxd9_MA0913.1	0	1	-	8.323343304007485	6.764199276437873	CCAATAAAAA
chr2	159029194	159029195	chr2:159029195:G:A	rs72936445	G	A	G	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr2	159089209	159089210	chr2:159089210:C:T	rs34163930	C	T	T	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr2	159204817	159204818	chr2:159204818:T:C	rs4665039	T	C	C	Hoxd9_MA0913.1	0	1	-	8.853608248980283	9.801341972390743	ACAATAAAAA
chr2	159207245	159207246	chr2:159207246:C:A	rs59463151	C	A	C	Hoxd9_MA0913.1	20	0	-	0	0	.
chr2	159312235	159312236	chr2:159312236:T:C	rs73967808	T	C	A	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr2	159617701	159617702	chr2:159617702:T:G	rs201241231	T	G	T	Hoxd9_MA0913.1	12	0	-	0	0	.
chr2	159732419	159732420	chr2:159732420:A:T	rs34795915	A	T	A	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr2	159745014	159745015	chr2:159745015:A:G	rs9646766	A	G	A	Hoxd9_MA0913.1	11	0	+	0	0	.
chr2	160021852	160021853	chr2:160021853:T:G	rs17830558	T	G	T	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr2	160034180	160034181	chr2:160034181:G:T	rs4665139	G	T	T	Hoxd9_MA0913.1	22	0	+	0	0	.
chr2	160037648	160037649	chr2:160037649:C:T	rs115701687	C	T	C	Hoxd9_MA0913.1	0	1	-	8.2283733949328	7.280639671522341	GCAATAAAGA
chr2	160255323	160255324	chr2:160255324:G:T	rs144310559	G	T	A	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr2	160679931	160679932	chr2:160679932:A:G	rs4664352	A	G	A	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr2	160747643	160747644	chr2:160747644:C:T	rs9917141	C	T	C	Hoxd9_MA0913.1	16	0	-	0	0	.
chr2	160932984	160932985	chr2:160932985:T:C	rs16845328	T	C	T	Hoxd9_MA0913.1	27	0	+	0	0	.
chr2	161063774	161063775	chr2:161063775:G:A	rs114892651	G	A	G	Hoxd9_MA0913.1	8	1	-	7.801678332738202	8.32301137036169	GCAATAAACA
chr2	161063802	161063803	chr2:161063803:C:G	rs190127936	C	G	C	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr2	161068984	161068985	chr2:161068985:A:T	rs6716626	A	T	T	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr2	161134813	161134814	chr2:161134814:G:C	rs3754979	G	C	G	Hoxd9_MA0913.1	10	0	+	0	0	.
chr2	162125539	162125540	chr2:162125540:T:C	rs114617592	T	C	T	Hoxd9_MA0913.1	12	0	-	0	0	.
chr2	162129729	162129730	chr2:162129730:C:T	rs6743387	C	T	C	Hoxd9_MA0913.1	11	0	-	0	0	.
chr2	162293454	162293455	chr2:162293455:T:C	rs4664463	T	C	T	Hoxd9_MA0913.1	11	0	-	0	0	.
chr2	162295382	162295383	chr2:162295383:T:C	rs191998670	T	C	T	Hoxd9_MA0913.1	13	0	-	0	0	.
chr2	162587498	162587499	chr2:162587499:C:T	rs1385865	C	T	T	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr2	162840540	162840541	chr2:162840541:C:A	rs12470503	C	A	C	Hoxd9_MA0913.1	27	0	-	0	0	.
chr2	163121172	163121173	chr2:163121173:A:C	rs10169365	A	C	C	Hoxd9_MA0913.1	7	1	+	9.412035922551908	6.118189170833476	GTAATTAAAA
chr2	163172234	163172235	chr2:163172235:T:C	rs1489635	T	C	T	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr2	163348993	163348994	chr2:163348994:A:T	rs893647832	A	T	A	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr2	163349037	163349038	chr2:163349038:G:A	rs114737771	G	A	G	Hoxd9_MA0913.1	26	0	+	0	0	.
chr2	163604436	163604437	chr2:163604437:A:G	rs7572130	A	G	A	Hoxd9_MA0913.1	7	1	+	8.812437826870472	1.9732933495161296	ACAATTAAAA
chr2	164297612	164297613	chr2:164297613:C:T	rs557897533	C	T	c	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr2	164773949	164773950	chr2:164773950:T:C	rs355865	T	C	C	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr2	164784829	164784830	chr2:164784830:A:T	rs355904	A	T	A	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr2	165036255	165036256	chr2:165036256:C:G	rs34207137	C	G	C	Hoxd9_MA0913.1	21	0	+	0	0	.
chr2	165162110	165162111	chr2:165162111:A:G	rs978151068	A	G	A	Hoxd9_MA0913.1	18	0	-	0	0	.
chr2	165162192	165162193	chr2:165162193:T:C	rs6756990	T	C	C	Hoxd9_MA0913.1	12	0	-	0	0	.
chr2	165505897	165505898	chr2:165505898:C:T	rs4667488	C	T	T	Hoxd9_MA0913.1	28	0	-	0	0	.
chr2	165621528	165621529	chr2:165621529:A:G	rs918231749	A	G	A	Hoxd9_MA0913.1	12	0	+	0	0	.
chr2	165804962	165804963	chr2:165804963:A:T	rs184532933	A	T	A	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr2	165844428	165844429	chr2:165844429:A:G	rs16851139	A	G	A	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr2	166084502	166084503	chr2:166084503:C:T	rs78001108	C	T	C	Hoxd9_MA0913.1	27	0	-	0	0	.
chr2	166175614	166175615	chr2:166175615:A:G	rs6738067	A	G	A	Hoxd9_MA0913.1	14	0	-	0	0	.
chr2	166314290	166314291	chr2:166314291:T:C	rs11885693	T	C	C	Hoxd9_MA0913.1	9	1	+	7.984561357794846	7.146334979680488	GCAATAAAGT
chr2	166314603	166314604	chr2:166314604:A:C	rs6731773	A	C	C	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr2	166464550	166464551	chr2:166464551:C:T	rs4476366	C	T	T	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr2	166823816	166823817	chr2:166823817:A:C	rs71428952	A	C	A	Hoxd9_MA0913.1	29	0	+	0	0	.
chr2	166962041	166962042	chr2:166962042:C:T	rs1473041	C	T	T	Hoxd9_MA0913.1	12	0	+	0	0	.
chr2	166996707	166996708	chr2:166996708:T:C	rs116531315	T	C	T	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr2	167287393	167287394	chr2:167287394:G:A	rs60988732	G	A	G	Hoxd9_MA0913.1	22	0	+	0	0	.
chr2	167692493	167692494	chr2:167692494:G:A	rs10930280	G	A	G	Hoxd9_MA0913.1	10	0	+	0	0	.
chr2	168486663	168486664	chr2:168486664:A:C	rs10209582	A	C	C	Hoxd9_MA0913.1	22	0	-	0	0	.
chr2	168728276	168728277	chr2:168728277:G:A	rs62174440	G	A	G	Hoxd9_MA0913.1	19	0	+	0	0	.
chr2	168971766	168971767	chr2:168971767:G:A	rs2241341	G	A	A	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr2	168998596	168998597	chr2:168998597:C:T	rs3770599	C	T	T	Hoxd9_MA0913.1	16	0	+	0	0	.
chr2	169073796	169073797	chr2:169073797:G:A	rs778694750	G	A	G	Hoxd9_MA0913.1	28	0	+	0	0	.
chr2	169095722	169095723	chr2:169095723:T:C	rs1059261	T	C	T	Hoxd9_MA0913.1	3	1	-	8.853608248980283	7.025989308485178	ACAATAAAAA
chr2	169142041	169142042	chr2:169142042:G:A	rs181885191	G	A	G	Hoxd9_MA0913.1	11	0	+	0	0	.
chr2	169577552	169577553	chr2:169577553:G:C	rs2353193	G	C	G	Hoxd9_MA0913.1	11	0	-	0	0	.
chr2	169748434	169748435	chr2:169748435:G:C	rs80320994	G	C	G	Hoxd9_MA0913.1	14	0	-	0	0	.
chr2	169825273	169825274	chr2:169825274:T:C	rs62173079	T	C	T	Hoxd9_MA0913.1	11	0	-	0	0	.
chr2	169964978	169964979	chr2:169964979:A:G	chr2:169964979:A:G	A	G	A	Hoxd9_MA0913.1	7	1	+	8.2283733949328	1.3892289175784578	GCAATAAAGA
chr2	170080335	170080336	chr2:170080336:G:A	rs79762944	G	A	G	Hoxd9_MA0913.1	11	0	-	0	0	.
chr2	170087960	170087961	chr2:170087961:G:A	rs9287928	G	A	A	Hoxd9_MA0913.1	0	1	+	7.984561357794846	7.0368276343843865	GCAATAAAGT
chr2	170155871	170155872	chr2:170155872:G:C	rs13025583	G	C	G	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr2	170161535	170161536	chr2:170161536:T:G	rs10191604	T	G	T	Hoxd9_MA0913.1	27	0	+	0	0	.
chr2	170252593	170252594	chr2:170252594:T:C	rs12467982	T	C	T	Hoxd9_MA0913.1	20	0	+	0	0	.
chr2	170340813	170340814	chr2:170340814:T:C	rs73975606	T	C	T	Hoxd9_MA0913.1	26	0	-	0	0	.
chr2	170340839	170340840	chr2:170340840:C:T	rs3088022	C	T	T	Hoxd9_MA0913.1	0	1	-	8.187202972822991	7.2394692494125295	GCAATTAAGA
chr2	170342885	170342886	chr2:170342886:T:A	rs73975607	T	A	T	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr2	170431303	170431304	chr2:170431304:G:A	rs13412287	G	A	G	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr2	170646691	170646692	chr2:170646692:A:G	rs66657267	A	G	G	Hoxd9_MA0913.1	18	0	-	0	0	.
chr2	170666059	170666060	chr2:170666060:T:C	rs9941572	T	C	c	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr2	170666065	170666066	chr2:170666066:C:T	rs9941519	C	T	c	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr2	170681090	170681091	chr2:170681091:A:G	rs73976215	A	G	A	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr2	170689702	170689703	chr2:170689703:G:A	rs6433232	G	A	A	Hoxd9_MA0913.1	0	1	+	9.412035922551908	8.464302199141448	GTAATTAAAA
chr2	171126749	171126750	chr2:171126750:G:A	rs73976285	G	A	G	Hoxd9_MA0913.1	11	0	-	0	0	.
chr2	171795906	171795907	chr2:171795907:C:T	rs75235617	C	T	C	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr2	171894168	171894169	chr2:171894169:T:C	rs368919933	T	C	T	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr2	172281056	172281057	chr2:172281057:T:C	rs4972764	T	C	C	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr2	172358469	172358470	chr2:172358470:C:G	rs13012568	C	G	G	Hoxd9_MA0913.1	27	0	+	0	0	.
chr2	172459109	172459110	chr2:172459110:T:C	rs12464480	T	C	T	Hoxd9_MA0913.1	4	1	+	8.853608248980283	5.561473997205303	ACAATAAAAA
chr2	172522090	172522091	chr2:172522091:G:C	rs11883720	G	C	G	Hoxd9_MA0913.1	1	1	-	8.293678209511443	5.201113197226728	GCAATTAAAG
chr2	172552772	172552773	chr2:172552773:A:G	rs895582763	A	G	A	Hoxd9_MA0913.1	18	0	-	0	0	.
chr2	172594359	172594360	chr2:172594360:G:T	rs35665064	G	T	G	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr2	172743046	172743047	chr2:172743047:G:A	rs10181126	G	A	G	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr2	172783278	172783279	chr2:172783279:T:G	rs76599085	T	G	T	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr2	172783293	172783294	chr2:172783294:T:C	rs141571931	T	C	T	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr2	172991816	172991817	chr2:172991817:T:C	rs1011345	T	C	T	Hoxd9_MA0913.1	0	1	-	8.853608248980283	9.801341972390743	ACAATAAAAA
chr2	173016748	173016749	chr2:173016749:C:T	rs72909440	C	T	C	Hoxd9_MA0913.1	16	0	+	0	0	.
chr2	173051687	173051688	chr2:173051688:A:T	chr2:173051688:A:T	A	T	A	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr2	173177253	173177254	chr2:173177254:G:A	rs34658268	G	A	a	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr2	173205335	173205336	chr2:173205336:C:T	rs77426349	C	T	C	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr2	173221012	173221013	chr2:173221013:A:G	rs11690597	A	G	A	Hoxd9_MA0913.1	20	0	+	0	0	.
chr2	173221018	173221019	chr2:173221019:C:T	rs1371573	C	T	C	Hoxd9_MA0913.1	26	0	+	0	0	.
chr2	173221556	173221557	chr2:173221557:C:T	rs74417392	C	T	C	Hoxd9_MA0913.1	12	0	+	0	0	.
chr2	173544910	173544911	chr2:173544911:G:A	rs143937792	G	A	G	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr2	173585119	173585120	chr2:173585120:G:A	rs56156503	G	A	G	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr2	173867509	173867510	chr2:173867510:G:A	rs182579044	G	A	G	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr2	174007263	174007264	chr2:174007264:T:C	rs79897941	T	C	T	Hoxd9_MA0913.1	11	0	+	0	0	.
chr2	174048311	174048312	chr2:174048312:T:C	rs912873154	T	C	T	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr2	174198985	174198986	chr2:174198986:C:T	rs12620454	C	T	C	Hoxd9_MA0913.1	20	0	+	0	0	.
chr2	174234508	174234509	chr2:174234509:G:A	rs56094369	G	A	G	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr2	174750303	174750304	chr2:174750304:C:T	rs11904606	C	T	C	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr2	175110063	175110064	chr2:175110064:T:C	rs1966430	T	C	C	Hoxd9_MA0913.1	26	0	+	0	0	.
chr2	175234263	175234264	chr2:175234264:G:A	rs60593477	G	A	G	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr2	175256524	175256525	chr2:175256525:T:G	rs268184	T	G	T	Hoxd9_MA0913.1	21	0	-	0	0	.
chr2	175275521	175275522	chr2:175275522:G:T	rs75655262	G	T	g	Hoxd9_MA0913.1	23	0	+	0	0	.
chr2	175275527	175275528	chr2:175275528:A:G	rs78265710	A	G	a	Hoxd9_MA0913.1	29	0	+	0	0	.
chr2	175364411	175364412	chr2:175364412:A:G	rs4553787	A	G	A	Hoxd9_MA0913.1	20	0	-	0	0	.
chr2	175575713	175575714	chr2:175575714:C:T	rs6750151	C	T	C	Hoxd9_MA0913.1	11	0	-	0	0	.
chr2	175577773	175577774	chr2:175577774:T:A	rs151314378	T	A	T	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr2	175807280	175807281	chr2:175807281:G:A	rs150049945	G	A	G	Hoxd9_MA0913.1	10	0	-	0	0	.
chr2	176013691	176013692	chr2:176013692:A:G	rs3099603	A	G	A	Hoxd9_MA0913.1	22	0	-	0	0	.
chr2	176077311	176077312	chr2:176077312:G:T	rs78797704	G	T	G	Hoxd9_MA0913.1	0	1	+	8.879672775420401	5.842530079467531	GCCATAAAAA
chr2	176466981	176466982	chr2:176466982:A:G	rs1005932	A	G	A	Hoxd9_MA0913.1	9	1	+	8.32301137036169	6.856518029592199	GCAATAAATA
chr2	176515462	176515463	chr2:176515463:G:A	rs7559379	G	A	G	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr2	176552734	176552735	chr2:176552735:T:C	chr2:176552735:T:C	T	C	t	Hoxd9_MA0913.1	15	0	+	0	0	.
chr2	176552742	176552743	chr2:176552743:A:G	rs1992909	A	G	A	Hoxd9_MA0913.1	23	0	+	0	0	.
chr2	176663144	176663145	chr2:176663145:G:A	rs1562608	G	A	A	Hoxd9_MA0913.1	18	0	-	0	0	.
chr2	176747579	176747580	chr2:176747580:A:G	rs2137733	A	G	A	Hoxd9_MA0913.1	21	0	-	0	0	.
chr2	176814943	176814944	chr2:176814944:T:C	rs7569150	T	C	T	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr2	176976965	176976966	chr2:176976966:C:A	rs76714736	C	A	C	Hoxd9_MA0913.1	18	0	-	0	0	.
chr2	177673855	177673856	chr2:177673856:C:T	rs1405714	C	T	c	Hoxd9_MA0913.1	17	0	-	0	0	.
chr2	177681169	177681170	chr2:177681170:C:T	rs9679360	C	T	C	Hoxd9_MA0913.1	26	0	+	0	0	.
chr2	177998532	177998533	chr2:177998533:G:A	rs2117738	G	A	G	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr2	178105847	178105848	chr2:178105848:G:A	rs11887974	G	A	G	Hoxd9_MA0913.1	15	0	+	0	0	.
chr2	178264291	178264292	chr2:178264292:A:G	rs334002	A	G	A	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr2	178431938	178431939	chr2:178431939:T:C	rs3997877	T	C	T	Hoxd9_MA0913.1	19	0	+	0	0	.
chr2	178828984	178828985	chr2:178828985:G:T	rs2366912	G	T	G	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr2	179030559	179030560	chr2:179030560:A:G	rs79605876	A	G	A	Hoxd9_MA0913.1	9	1	-	9.168223885413955	8.329997507299597	GTAATTAAAT
chr2	179031688	179031689	chr2:179031689:G:A	rs4435492	G	A	G	Hoxd9_MA0913.1	23	0	-	0	0	.
chr2	179050710	179050711	chr2:179050711:G:T	rs340332	G	T	G	Hoxd9_MA0913.1	15	0	-	0	0	.
chr2	179051519	179051520	chr2:179051520:T:C	rs368088252	T	C	T	Hoxd9_MA0913.1	6	1	-	8.635860738282448	1.8204400705031076	GCCATAAAAT
chr2	179108105	179108106	chr2:179108106:C:G	rs17454024	C	G	G	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr2	179226833	179226834	chr2:179226834:T:C	rs13414296	T	C	T	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr2	179261187	179261188	chr2:179261188:G:A	rs1044705634	G	A	G	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr2	179412007	179412008	chr2:179412008:C:A	rs114831388	C	A	C	Hoxd9_MA0913.1	0	1	-	8.329997507299597	5.292854811346727	GTAATTAAAC
chr2	179538811	179538812	chr2:179538812:T:A	rs114287278	T	A	T	Hoxd9_MA0913.1	27	0	+	0	0	.
chr2	179558598	179558599	chr2:179558599:A:T	rs1515300	A	T	T	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr2	179580290	179580291	chr2:179580291:G:T	rs80300097	G	T	G	Hoxd9_MA0913.1	14	0	+	0	0	.
chr2	179685630	179685631	chr2:179685631:T:C	rs11901346	T	C	T	Hoxd9_MA0913.1	7	1	-	7.973723031895638	1.1345785545412956	GCAGTAAAAA
chr2	179702828	179702829	chr2:179702829:A:T	rs12471882	A	T	T	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr2	180048410	180048411	chr2:180048411:G:A	rs62182013	G	A	.	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr2	180212021	180212022	chr2:180212022:C:T	rs13418455	C	T	C	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr2	180386293	180386294	chr2:180386294:A:T	rs4894176	A	T	T	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr2	181035894	181035895	chr2:181035895:C:G	rs12614444	C	G	C	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr2	181037263	181037264	chr2:181037264:A:G	rs6433881	A	G	A	Hoxd9_MA0913.1	11	0	-	0	0	.
chr2	181174773	181174774	chr2:181174774:C:T	rs562882017	C	T	C	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr2	181430671	181430672	chr2:181430672:C:T	rs538423847	C	T	C	Hoxd9_MA0913.1	8	1	-	8.2283733949328	9.801341972390743	GCAATAAAGA
chr2	181602178	181602179	chr2:181602179:A:C	rs16867455	A	C	A	Hoxd9_MA0913.1	4	1	-	7.7976343601680895	4.50550010839311	GCCATAAAAC
chr2	181682180	181682181	chr2:181682181:A:C	rs143154028	A	C	a	Hoxd9_MA0913.1	9	1	+	8.32301137036169	7.240972955109379	GCAATAAATA
chr2	181691100	181691101	chr2:181691101:C:T	rs575479051	C	T	c	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr2	181741934	181741935	chr2:181741935:C:T	rs146477771	C	T	C	Hoxd9_MA0913.1	26	0	-	0	0	.
chr2	181741965	181741966	chr2:181741966:T:G	rs1208112257	T	G	T	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr2	181741973	181741974	chr2:181741974:C:G	rs12617923	C	G	C	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr2	181773418	181773419	chr2:181773419:T:C	rs11901603	T	C	C	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr2	182499995	182499996	chr2:182499996:T:C	rs35361731	T	C	T	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr2	182505494	182505495	chr2:182505495:C:T	rs35182213	C	T	C	Hoxd9_MA0913.1	22	0	-	0	0	.
chr2	182636956	182636957	chr2:182636957:G:A	rs4666859	G	A	G	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr2	182890411	182890412	chr2:182890412:C:T	rs10177372	C	T	C	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr2	183770438	183770439	chr2:183770439:G:A	rs16825054	G	A	G	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr2	183869037	183869038	chr2:183869038:T:A	rs826173	T	A	T	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr2	184153712	184153713	chr2:184153713:T:C	rs148803221	T	C	T	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr2	184153750	184153751	chr2:184153751:C:T	rs4355073	C	T	C	Hoxd9_MA0913.1	21	0	+	0	0	.
chr2	184534185	184534186	chr2:184534186:A:G	rs77785660	A	G	A	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr2	184905186	184905187	chr2:184905187:T:C	rs151243306	T	C	T	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr2	185168527	185168528	chr2:185168528:T:A	rs62198554	T	A	T	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr2	185171396	185171397	chr2:185171397:G:T	rs62198555	G	T	G	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr2	185276635	185276636	chr2:185276636:C:G	rs10931166	C	G	C	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr2	185542687	185542688	chr2:185542688:C:A	rs11896364	C	A	C	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr2	186336584	186336585	chr2:186336585:G:T	rs2044683	G	T	G	Hoxd9_MA0913.1	9	1	-	8.329997507299597	9.412035922551908	GTAATTAAAC
chr2	186981789	186981790	chr2:186981790:C:T	rs10460381	C	T	C	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr2	187168593	187168594	chr2:187168594:T:C	rs12613710	T	C	T	Hoxd9_MA0913.1	17	0	+	0	0	.
chr2	187303622	187303623	chr2:187303623:A:G	rs840576	A	G	G	Hoxd9_MA0913.1	19	0	+	0	0	.
chr2	187434451	187434452	chr2:187434452:C:G	rs79686003	C	G	C	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr2	187618296	187618297	chr2:187618297:C:A	rs7588669	C	A	A	Hoxd9_MA0913.1	10	0	-	0	0	.
chr2	188242917	188242918	chr2:188242918:A:T	rs6728462	A	T	A	Hoxd9_MA0913.1	13	0	+	0	0	.
chr2	188526333	188526334	chr2:188526334:T:C	rs563613411	T	C	T	Hoxd9_MA0913.1	3	1	-	7.75646393805828	5.928844997563175	GCCATTAAAC
chr2	188605086	188605087	chr2:188605087:A:G	rs1605462	A	G	A	Hoxd9_MA0913.1	27	0	+	0	0	.
chr2	188752014	188752015	chr2:188752015:G:C	rs17354592	G	C	G	Hoxd9_MA0913.1	28	0	-	0	0	.
chr2	188766439	188766440	chr2:188766440:G:A	rs2138960	G	A	A	Hoxd9_MA0913.1	10	0	-	0	0	.
chr2	188787115	188787116	chr2:188787116:A:T	rs7569460	A	T	A	Hoxd9_MA0913.1	23	0	-	0	0	.
chr2	188787116	188787117	chr2:188787117:A:G	rs7569461	A	G	A	Hoxd9_MA0913.1	22	0	-	0	0	.
chr2	188835029	188835030	chr2:188835030:G:A	rs10172458	G	A	A	Hoxd9_MA0913.1	0	1	+	8.719303557138431	7.7715698337279715	GCAATAAAAC
chr2	189065627	189065628	chr2:189065628:T:C	rs72904412	T	C	T	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr2	189094477	189094478	chr2:189094478:G:A	rs72906337	G	A	G	Hoxd9_MA0913.1	20	0	+	0	0	.
chr2	189223627	189223628	chr2:189223628:A:G	rs35772309	A	G	G	Hoxd9_MA0913.1	5	1	+	9.801341972390743	3.5796788194948737	GCAATAAAAA
chr2	189226094	189226095	chr2:189226095:T:G	rs7587147	T	G	G	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr2	189306652	189306653	chr2:189306653:C:T	rs10188565	C	T	T	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr2	189763301	189763302	chr2:189763302:T:C	rs115641614	T	C	T	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr2	190433046	190433047	chr2:190433047:C:T	rs4853705	C	T	C	Hoxd9_MA0913.1	18	0	-	0	0	.
chr2	190574521	190574522	chr2:190574522:T:C	rs10173771	T	C	T	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr2	190644586	190644587	chr2:190644587:C:T	rs12623203	C	T	T	Hoxd9_MA0913.1	29	0	+	0	0	.
chr2	190663435	190663436	chr2:190663436:T:C	rs958770	T	C	C	Hoxd9_MA0913.1	9	1	-	8.323343304007485	6.856849963237993	CCAATAAAAA
chr2	190810088	190810089	chr2:190810089:A:G	rs6736182	A	G	A	Hoxd9_MA0913.1	25	0	-	0	0	.
chr2	190947494	190947495	chr2:190947495:T:C	rs115927075	T	C	T	Hoxd9_MA0913.1	16	0	-	0	0	.
chr2	191307550	191307551	chr2:191307551:G:A	rs35495506	G	A	G	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr2	191566264	191566265	chr2:191566265:G:C	rs6434485	G	C	C	Hoxd9_MA0913.1	27	0	+	0	0	.
chr2	191585861	191585862	chr2:191585862:A:G	rs13013800	A	G	A	Hoxd9_MA0913.1	26	0	+	0	0	.
chr2	191812473	191812474	chr2:191812474:A:G	rs145529755	A	G	A	Hoxd9_MA0913.1	22	0	-	0	0	.
chr2	191878721	191878722	chr2:191878722:A:G	rs141497674	A	G	A	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr2	191975605	191975606	chr2:191975606:G:T	rs4371301	G	T	T	Hoxd9_MA0913.1	17	0	-	0	0	.
chr2	192146230	192146231	chr2:192146231:C:G	rs115004337	C	G	C	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr2	192168629	192168630	chr2:192168630:C:G	rs57943709	C	G	C	Hoxd9_MA0913.1	26	0	-	0	0	.
chr2	195570221	195570222	chr2:195570222:A:T	rs74938342	A	T	A	Hoxd9_MA0913.1	22	0	-	0	0	.
chr2	195592756	195592757	chr2:195592757:A:G	rs16837588	A	G	A	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr2	195816974	195816975	chr2:195816975:C:T	rs77817274	C	T	C	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr2	195899507	195899508	chr2:195899508:G:C	rs144687767	G	C	G	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr2	196001695	196001696	chr2:196001696:C:T	rs6434811	C	T	C	Hoxd9_MA0913.1	11	0	+	0	0	.
chr2	196086794	196086795	chr2:196086795:T:C	rs4316951	T	C	C	Hoxd9_MA0913.1	16	0	+	0	0	.
chr2	196151526	196151527	chr2:196151527:A:G	rs4850384	A	G	a	Hoxd9_MA0913.1	25	0	-	0	0	.
chr2	196160258	196160259	chr2:196160259:G:C	rs75885050	G	C	G	Hoxd9_MA0913.1	26	0	+	0	0	.
chr2	196249975	196249976	chr2:196249976:T:A	rs10931735	T	A	T	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr2	196263642	196263643	chr2:196263643:T:C	rs55638001	T	C	T	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr2	196263651	196263652	chr2:196263652:C:T	rs56150124	C	T	C	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr2	196263659	196263660	chr2:196263660:C:T	rs115702999	C	T	C	Hoxd9_MA0913.1	1	1	+	7.932552609785828	7.584416982056805	GCAGTTAAAA
chr2	196276546	196276547	chr2:196276547:C:T	rs4145361	C	T	C	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr2	197307423	197307424	chr2:197307424:T:G	rs1366836	T	G	G	Hoxd9_MA0913.1	4	1	+	9.801341972390743	6.509207720615763	GCAATAAAAA
chr2	197798205	197798206	chr2:197798206:C:T	rs1239905253	C	T	C	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr2	198441100	198441101	chr2:198441101:T:C	rs4241196	T	C	T	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr2	198556853	198556854	chr2:198556854:G:C	rs1378402	G	C	G	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr2	198870358	198870359	chr2:198870359:T:C	rs56322003	T	C	T	Hoxd9_MA0913.1	21	0	+	0	0	.
chr2	199902788	199902789	chr2:199902789:C:T	rs1658807	C	T	T	Hoxd9_MA0913.1	0	1	-	7.7976343601680895	6.84990063675763	GCCATAAAAC
chr2	199955775	199955776	chr2:199955776:C:A	rs192902107	C	A	C	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr2	199955781	199955782	chr2:199955782:T:G	rs281766	T	G	G	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr2	199991007	199991008	chr2:199991008:G:A	rs12479402	G	A	G	Hoxd9_MA0913.1	27	0	+	0	0	.
chr2	200156601	200156602	chr2:200156602:C:T	rs59695400	C	T	T	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr2	200224597	200224598	chr2:200224598:T:C	rs1729419	T	C	T	Hoxd9_MA0913.1	25	0	-	0	0	.
chr2	200405532	200405533	chr2:200405533:T:C	rs7605374	T	C	C	Hoxd9_MA0913.1	29	0	+	0	0	.
chr2	200454996	200454997	chr2:200454997:G:A	rs35893078	G	A	G	Hoxd9_MA0913.1	28	0	+	0	0	.
chr2	200483929	200483930	chr2:200483930:A:G	rs116287888	A	G	A	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr2	200651961	200651962	chr2:200651962:C:T	rs2348024	C	T	T	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr2	200825018	200825019	chr2:200825019:C:T	rs12995928	C	T	-	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr2	200888115	200888116	chr2:200888116:G:T	rs115170097	G	T	G	Hoxd9_MA0913.1	20	0	+	0	0	.
chr2	200888116	200888117	chr2:200888117:A:T	rs74783123	A	T	A	Hoxd9_MA0913.1	21	0	+	0	0	.
chr2	201157803	201157804	chr2:201157804:G:C	rs2268791	G	C	C	Hoxd9_MA0913.1	0	1	+	7.984561357794846	6.506562689411589	GCAATAAAGT
chr2	201402138	201402139	chr2:201402139:T:G	rs10804114	T	G	G	Hoxd9_MA0913.1	15	0	+	0	0	.
chr2	201564347	201564348	chr2:201564348:T:A	rs12996634	T	A	T	Hoxd9_MA0913.1	28	0	+	0	0	.
chr2	201709155	201709156	chr2:201709156:C:G	rs72613731	C	G	C	Hoxd9_MA0913.1	29	0	-	0	0	.
chr2	201777035	201777036	chr2:201777036:T:C	rs13418877	T	C	T	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr2	201859164	201859165	chr2:201859165:C:A	rs114672623	C	A	C	Hoxd9_MA0913.1	18	0	+	0	0	.
chr2	202014945	202014946	chr2:202014946:A:G	rs16838625	A	G	A	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr2	202100262	202100263	chr2:202100263:C:A	rs6755174	C	A	A	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr2	202130081	202130082	chr2:202130082:A:G	rs113614214	A	G	A	Hoxd9_MA0913.1	4	1	-	8.838502353310592	5.546368101535611	GCCATTAAAA
chr2	202682149	202682150	chr2:202682150:C:T	rs11675723	C	T	C	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr2	202687397	202687398	chr2:202687398:T:C	rs558757362	T	C	T	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr2	203412884	203412885	chr2:203412885:G:C	rs1470789	G	C	C	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr2	203631192	203631193	chr2:203631193:G:A	rs72932333	G	A	G	Hoxd9_MA0913.1	12	0	-	0	0	.
chr2	203683112	203683113	chr2:203683113:A:G	rs571202036	A	G	A	Hoxd9_MA0913.1	18	0	+	0	0	.
chr2	204030266	204030267	chr2:204030267:T:C	rs4143802	T	C	C	Hoxd9_MA0913.1	26	0	+	0	0	.
chr2	204259110	204259111	chr2:204259111:G:C	rs76785053	G	C	G	Hoxd9_MA0913.1	22	0	+	0	0	.
chr2	204268166	204268167	chr2:204268167:C:G	rs9288352	C	G	G	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr2	204268167	204268168	chr2:204268168:G:A	rs188161636	G	A	G	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr2	204530102	204530103	chr2:204530103:A:G	rs10179665	A	G	A	Hoxd9_MA0913.1	13	0	+	0	0	.
chr2	205034516	205034517	chr2:205034517:G:A	rs12617699	G	A	G	Hoxd9_MA0913.1	16	0	-	0	0	.
chr2	205159168	205159169	chr2:205159169:C:T	rs6435271	C	T	C	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr2	205175046	205175047	chr2:205175047:T:C	rs10170069	T	C	T	Hoxd9_MA0913.1	29	0	-	0	0	.
chr2	205560341	205560342	chr2:205560342:C:T	rs2192933	C	T	C	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr2	206052140	206052141	chr2:206052141:A:G	rs192817210	A	G	A	Hoxd9_MA0913.1	16	0	-	0	0	.
chr2	206164573	206164574	chr2:206164574:T:C	rs2058706	T	C	C	Hoxd9_MA0913.1	12	0	+	0	0	.
chr2	206181619	206181620	chr2:206181620:T:C	rs13029813	T	C	T	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr2	206181638	206181639	chr2:206181639:T:G	rs13029823	T	G	A	Hoxd9_MA0913.1	17	0	+	0	0	.
chr2	206260483	206260484	chr2:206260484:T:C	rs117618602	T	C	t	Hoxd9_MA0913.1	24	0	-	0	0	.
chr2	206313697	206313698	chr2:206313698:G:A	rs1448902	G	A	A	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr2	206810855	206810856	chr2:206810856:A:T	rs187392972	A	T	a	Hoxd9_MA0913.1	23	0	+	0	0	.
chr2	206833213	206833214	chr2:206833214:T:G	rs34522563	T	G	T	Hoxd9_MA0913.1	7	1	-	9.801341972390743	6.507495220672311	GCAATAAAAA
chr2	206878992	206878993	chr2:206878993:T:C	rs56409875	T	C	T	Hoxd9_MA0913.1	27	0	-	0	0	.
chr2	206995032	206995033	chr2:206995033:T:C	rs10180647	T	C	C	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr2	207031469	207031470	chr2:207031470:T:C	rs114752262	T	C	T	Hoxd9_MA0913.1	10	0	+	0	0	.
chr2	207041894	207041895	chr2:207041895:T:C	rs76697815	T	C	T	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr2	207078137	207078138	chr2:207078138:T:A	rs13035688	T	A	T	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr2	207083119	207083120	chr2:207083120:G:T	rs73983159	G	T	G	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr2	207181826	207181827	chr2:207181827:C:T	rs75861751	C	T	C	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr2	207225179	207225180	chr2:207225180:T:C	rs2216374	T	C	T	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr2	207274525	207274526	chr2:207274526:A:G	rs183654344	A	G	A	Hoxd9_MA0913.1	27	0	+	0	0	.
chr2	207395219	207395220	chr2:207395220:A:T	rs144787032	A	T	A	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr2	207424436	207424437	chr2:207424437:A:C	rs11892543	A	C	A	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr2	207667283	207667284	chr2:207667284:C:T	rs13417554	C	T	C	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr2	207676947	207676948	chr2:207676948:G:C	rs6713343	G	C	G	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr2	207676984	207676985	chr2:207676985:A:G	rs78512077	A	G	A	Hoxd9_MA0913.1	24	0	+	0	0	.
chr2	208026936	208026937	chr2:208026937:C:T	rs1466186	C	T	C	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr2	208491221	208491222	chr2:208491222:G:A	rs17718694	G	A	G	Hoxd9_MA0913.1	29	0	-	0	0	.
chr2	208607856	208607857	chr2:208607857:A:G	rs12694115	A	G	A	Hoxd9_MA0913.1	3	1	+	8.531537147691377	6.703918207196272	GTCATAAAAA
chr2	209094697	209094698	chr2:209094698:C:T	rs4673446	C	T	C	Hoxd9_MA0913.1	12	0	+	0	0	.
chr2	209272977	209272978	chr2:209272978:A:G	rs990298	A	G	G	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr2	209314906	209314907	chr2:209314907:A:C	rs79069051	A	C	A	Hoxd9_MA0913.1	20	0	+	0	0	.
chr2	209359112	209359113	chr2:209359113:T:A	rs1156703	T	A	T	Hoxd9_MA0913.1	19	0	+	0	0	.
chr2	210172574	210172575	chr2:210172575:T:A	rs997689106	T	A	T	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr2	210470827	210470828	chr2:210470828:C:G	rs62203670	C	G	G	Hoxd9_MA0913.1	29	0	-	0	0	.
chr2	210470874	210470875	chr2:210470875:A:C	rs3856342	A	C	A	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr2	210476903	210476904	chr2:210476904:G:A	chr2:210476904:G:A	G	A	G	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr2	210617571	210617572	chr2:210617572:A:C	rs3770684	A	C	A	Hoxd9_MA0913.1	3	1	+	8.371167929409406	3.9049372590093503	GTAATAAAAC
chr2	210663961	210663962	chr2:210663962:A:T	rs77687825	A	T	A	Hoxd9_MA0913.1	22	0	-	0	0	.
chr2	210663984	210663985	chr2:210663985:A:C	rs73076051	A	C	A	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr2	210714746	210714747	chr2:210714747:G:A	rs113161877	G	A	G	Hoxd9_MA0913.1	1	1	-	7.8800714937946905	7.531935866065666	GCGATAAAAT
chr2	210768780	210768781	chr2:210768781:A:G	rs10208743	A	G	A	Hoxd9_MA0913.1	17	0	-	0	0	.
chr2	210971623	210971624	chr2:210971624:C:A	rs116696338	C	A	C	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr2	211086720	211086721	chr2:211086721:G:T	rs11682145	G	T	G	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr2	211107127	211107128	chr2:211107128:T:A	rs319728	T	A	A	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr2	211219021	211219022	chr2:211219022:C:T	rs1370609	C	T	C	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr2	211329496	211329497	chr2:211329497:T:C	rs12694232	T	C	T	Hoxd9_MA0913.1	18	0	+	0	0	.
chr2	211868438	211868439	chr2:211868439:A:G	rs13002674	A	G	A	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr2	211905087	211905088	chr2:211905088:C:T	rs13389940	C	T	t	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr2	211933163	211933164	chr2:211933164:G:T	rs144404201	G	T	G	Hoxd9_MA0913.1	29	0	-	0	0	.
chr2	212017464	212017465	chr2:212017465:T:C	rs1473636	T	C	T	Hoxd9_MA0913.1	4	1	+	8.371167929409406	5.079033677634427	GTAATAAAAC
chr2	212110338	212110339	chr2:212110339:T:C	rs6435689	T	C	C	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr2	212110667	212110668	chr2:212110668:C:G	rs6435691	C	G	C	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr2	212357506	212357507	chr2:212357507:C:T	rs550319793	C	T	C	Hoxd9_MA0913.1	1	1	+	8.853608248980283	8.505472621251258	ACAATAAAAA
chr2	212495285	212495286	chr2:212495286:T:C	rs78275358	T	C	T	Hoxd9_MA0913.1	29	0	+	0	0	.
chr2	212669827	212669828	chr2:212669828:T:C	rs72933053	T	C	T	Hoxd9_MA0913.1	3	1	-	8.812437826870472	6.984818886375368	ACAATTAAAA
chr2	212714052	212714053	chr2:212714053:A:G	rs13393014	A	G	A	Hoxd9_MA0913.1	23	0	+	0	0	.
chr2	213237051	213237052	chr2:213237052:T:C	rs112886866	T	C	T	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr2	213237221	213237222	chr2:213237222:G:T	rs545387917	G	T	G	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr2	213309934	213309935	chr2:213309935:A:G	rs72935193	A	G	A	Hoxd9_MA0913.1	29	0	+	0	0	.
chr2	213949707	213949708	chr2:213949708:C:T	rs1397358	C	T	T	Hoxd9_MA0913.1	11	0	-	0	0	.
chr2	213949729	213949730	chr2:213949730:G:A	rs73990006	G	A	G	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr2	214140325	214140326	chr2:214140326:G:A	rs34869910	G	A	G	Hoxd9_MA0913.1	1	1	-	9.51635951314298	9.168223885413955	GCAATTAAAT
chr2	214283914	214283915	chr2:214283915:G:A	rs1912198	G	A	A	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr2	214377182	214377183	chr2:214377183:T:C	rs7420670	T	C	C	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr2	214816185	214816186	chr2:214816186:A:G	rs12617559	A	G	A	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr2	215059348	215059349	chr2:215059349:C:G	rs1464686	C	G	G	Hoxd9_MA0913.1	28	0	-	0	0	.
chr2	215272106	215272107	chr2:215272107:G:C	rs9973381	G	C	G	Hoxd9_MA0913.1	8	1	+	8.187202972822991	7.760507910628393	GCAATTAAGA
chr2	215436450	215436451	chr2:215436451:T:C	rs527990487	T	C	T	Hoxd9_MA0913.1	13	0	-	0	0	.
chr2	215712508	215712509	chr2:215712509:C:T	rs3113502	C	T	C	Hoxd9_MA0913.1	23	0	-	0	0	.
chr2	215803551	215803552	chr2:215803552:G:A	rs142215263	G	A	G	Hoxd9_MA0913.1	23	0	+	0	0	.
chr2	215860177	215860178	chr2:215860178:C:T	rs73988008	C	T	C	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr2	215862471	215862472	chr2:215862472:C:T	rs111541319	C	T	C	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr2	215863869	215863870	chr2:215863870:C:T	rs59791268	C	T	T	Hoxd9_MA0913.1	18	0	-	0	0	.
chr2	215863885	215863886	chr2:215863886:G:A	rs61607127	G	A	G	Hoxd9_MA0913.1	2	1	-	8.287725110553424	2.759050275672983	GTCATAAAAT
chr2	215919185	215919186	chr2:215919186:T:C	rs60124076	T	C	C	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr2	216350795	216350796	chr2:216350796:C:T	rs11685872	C	T	C	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr2	216694011	216694012	chr2:216694012:T:C	rs3770472	T	C	T	Hoxd9_MA0913.1	16	0	+	0	0	.
chr2	216872219	216872220	chr2:216872220:C:T	rs6745015	C	T	C	Hoxd9_MA0913.1	15	0	+	0	0	.
chr2	216900783	216900784	chr2:216900784:A:G	rs35889162	A	G	A	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr2	217058881	217058882	chr2:217058882:G:T	rs17835044	G	T	G	Hoxd9_MA0913.1	14	0	-	0	0	.
chr2	217299794	217299795	chr2:217299795:G:C	rs528251883	G	C	G	Hoxd9_MA0913.1	16	0	-	0	0	.
chr2	217437217	217437218	chr2:217437218:T:C	rs13035369	T	C	T	Hoxd9_MA0913.1	4	1	+	9.55752993525279	6.265395683477809	GCAATAAAAT
chr2	217745529	217745530	chr2:217745530:G:A	rs10804262	G	A	G	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr2	218040671	218040672	chr2:218040672:A:G	rs10178423	A	G	A	Hoxd9_MA0913.1	24	0	-	0	0	.
chr2	218187534	218187535	chr2:218187535:G:A	rs141076492	G	A	G	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr2	218383311	218383312	chr2:218383312:T:C	rs7591242	T	C	T	Hoxd9_MA0913.1	9	1	+	7.83890107168488	7.000674693570522	GCGATTAAAT
chr2	218472235	218472236	chr2:218472236:T:A	rs833083	T	A	T	Hoxd9_MA0913.1	22	0	-	0	0	.
chr2	219250303	219250304	chr2:219250304:C:T	rs11556349	C	T	C	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr2	219399260	219399261	chr2:219399261:T:C	rs12994406	T	C	T	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr2	219729163	219729164	chr2:219729164:G:C	chr2:219729164:G:C	G	C	G	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr2	219753059	219753060	chr2:219753060:G:A	rs1834287	G	A	G	Hoxd9_MA0913.1	8	1	-	7.801678332738202	8.32301137036169	GCAATAAACA
chr2	219783342	219783343	chr2:219783343:C:T	chr2:219783343:C:T	C	T	C	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr2	219845113	219845114	chr2:219845114:A:T	rs59312350	A	T	A	Hoxd9_MA0913.1	4	1	-	7.75646393805828	5.069212513872123	GCCATTAAAC
chr2	219964443	219964444	chr2:219964444:G:A	rs13005658	G	A	G	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr2	220124743	220124744	chr2:220124744:C:T	rs80091262	C	T	C	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr2	220166461	220166462	chr2:220166462:G:A	rs7577412	G	A	G	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr2	220168768	220168769	chr2:220168769:A:G	rs80335016	A	G	A	Hoxd9_MA0913.1	27	0	-	0	0	.
chr2	220241482	220241483	chr2:220241483:A:G	rs67718827	A	G	A	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr2	220280140	220280141	chr2:220280141:A:G	rs6711764	A	G	G	Hoxd9_MA0913.1	13	0	-	0	0	.
chr2	220469102	220469103	chr2:220469103:G:A	rs6436212	G	A	A	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr2	220503599	220503600	chr2:220503600:A:C	rs13020102	A	C	A	Hoxd9_MA0913.1	7	1	+	8.879672775420401	5.585826023701971	GCCATAAAAA
chr2	220779647	220779648	chr2:220779648:C:G	rs13018805	C	G	C	Hoxd9_MA0913.1	14	0	+	0	0	.
chr2	220840936	220840937	chr2:220840937:C:T	rs16861825	C	T	C	Hoxd9_MA0913.1	12	0	-	0	0	.
chr2	220969569	220969570	chr2:220969570:C:T	rs574105201	C	T	C	Hoxd9_MA0913.1	0	1	-	8.334848631621252	7.387114908210791	GCAATAAAAG
chr2	221005430	221005431	chr2:221005431:G:A	rs76874499	G	A	G	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr2	221040228	221040229	chr2:221040229:A:T	rs13033151	A	T	A	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr2	221166499	221166500	chr2:221166500:A:G	rs138770034	A	G	A	Hoxd9_MA0913.1	28	0	-	0	0	.
chr2	221291549	221291550	chr2:221291550:T:C	rs4672997	T	C	T	Hoxd9_MA0913.1	14	0	+	0	0	.
chr2	221448163	221448164	chr2:221448164:C:A	rs13411252	C	A	C	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr2	221486067	221486068	chr2:221486068:C:T	rs13012429	C	T	C	Hoxd9_MA0913.1	27	0	+	0	0	.
chr2	221726743	221726744	chr2:221726744:T:C	rs73993274	T	C	C	Hoxd9_MA0913.1	28	0	+	0	0	.
chr2	221893813	221893814	chr2:221893814:C:T	rs80305032	C	T	C	Hoxd9_MA0913.1	27	0	+	0	0	.
chr2	222006266	222006267	chr2:222006267:A:T	rs11889908	A	T	A	Hoxd9_MA0913.1	11	0	-	0	0	.
chr2	222332401	222332402	chr2:222332402:A:T	rs143898238	A	T	A	Hoxd9_MA0913.1	9	1	+	7.932552609785828	7.688740572647875	GCAGTTAAAA
chr2	222652985	222652986	chr2:222652986:C:G	rs10170846	C	G	g	Hoxd9_MA0913.1	18	0	+	0	0	.
chr2	222709025	222709026	chr2:222709026:A:T	rs7581592	A	T	A	Hoxd9_MA0913.1	5	1	-	8.812437826870472	8.853608248980283	ACAATTAAAA
chr2	222714369	222714370	chr2:222714370:C:T	rs74511388	C	T	T	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr2	222752276	222752277	chr2:222752277:G:A	rs62186284	G	A	G	Hoxd9_MA0913.1	12	0	-	0	0	.
chr2	222824350	222824351	chr2:222824351:A:T	rs4673039	A	T	A	Hoxd9_MA0913.1	29	0	+	0	0	.
chr2	222955306	222955307	chr2:222955307:T:C	rs7607175	T	C	T	Hoxd9_MA0913.1	23	0	-	0	0	.
chr2	223495231	223495232	chr2:223495232:T:C	rs78615335	T	C	T	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr2	223502237	223502238	chr2:223502238:C:T	rs721358	C	T	C	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr2	223644408	223644409	chr2:223644409:G:C	rs1982182	G	C	C	Hoxd9_MA0913.1	0	1	+	8.2283733949328	6.750374726549543	GCAATAAAGA
chr2	223937421	223937422	chr2:223937422:G:C	rs9288585	G	C	G	Hoxd9_MA0913.1	11	0	+	0	0	.
chr2	223954752	223954753	chr2:223954753:T:C	rs12465843	T	C	T	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr2	224286937	224286938	chr2:224286938:T:C	rs1008415	T	C	T	Hoxd9_MA0913.1	16	0	+	0	0	.
chr2	224287566	224287567	chr2:224287567:G:A	rs918286	G	A	A	Hoxd9_MA0913.1	23	0	-	0	0	.
chr2	224999874	224999875	chr2:224999875:T:C	rs116324446	T	C	T	Hoxd9_MA0913.1	3	1	-	9.55752993525279	7.7299109947576845	GCAATAAAAT
chr2	225178808	225178809	chr2:225178809:A:G	rs1348425	A	G	G	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr2	225178826	225178827	chr2:225178827:G:A	rs6751024	G	A	G	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr2	225260440	225260441	chr2:225260441:G:A	rs11886244	G	A	A	Hoxd9_MA0913.1	12	0	+	0	0	.
chr2	225662647	225662648	chr2:225662648:C:T	rs1869603	C	T	T	Hoxd9_MA0913.1	24	0	-	0	0	.
chr2	225736046	225736047	chr2:225736047:G:T	rs10498195	G	T	G	Hoxd9_MA0913.1	15	0	+	0	0	.
chr2	226124439	226124440	chr2:226124440:A:C	rs1522804	A	C	C	Hoxd9_MA0913.1	26	0	+	0	0	.
chr2	226185797	226185798	chr2:226185798:C:G	rs144417520	C	G	C	Hoxd9_MA0913.1	25	0	+	0	0	.
chr2	226356546	226356547	chr2:226356547:T:C	rs17185219	T	C	C	Hoxd9_MA0913.1	16	0	-	0	0	.
chr2	226398865	226398866	chr2:226398866:C:T	rs7592897	C	T	C	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr2	226424367	226424368	chr2:226424368:T:C	rs4392250	T	C	C	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr2	226436143	226436144	chr2:226436144:G:A	rs6754059	G	A	G	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr2	226439998	226439999	chr2:226439999:G:C	rs10933145	G	C	C	Hoxd9_MA0913.1	19	0	-	0	0	.
chr2	226548506	226548507	chr2:226548507:C:T	rs1875336	C	T	T	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr2	226548946	226548947	chr2:226548947:G:T	rs56960665	G	T	G	Hoxd9_MA0913.1	11	0	-	0	0	.
chr2	226551945	226551946	chr2:226551946:C:T	rs11676181	C	T	C	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr2	226619140	226619141	chr2:226619141:A:C	chr2:226619141:A:C	A	C	A	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr2	226619142	226619143	chr2:226619143:A:C	chr2:226619143:A:C	A	C	A	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr2	226690631	226690632	chr2:226690632:G:A	rs9808108	G	A	G	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr2	226711764	226711765	chr2:226711765:T:C	rs75541728	T	C	T	Hoxd9_MA0913.1	28	0	-	0	0	.
chr2	227035702	227035703	chr2:227035703:G:A	rs10166736	G	A	A	Hoxd9_MA0913.1	10	0	-	0	0	.
chr2	227228728	227228729	chr2:227228729:C:T	rs72977853	C	T	C	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr2	227325033	227325034	chr2:227325034:T:A	chr2:227325034:T:A	T	A	T	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr2	227388836	227388837	chr2:227388837:G:A	rs35438597	G	A	g	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr2	227388854	227388855	chr2:227388855:A:C	rs145814862	A	C	a	Hoxd9_MA0913.1	16	0	+	0	0	.
chr2	227399944	227399945	chr2:227399945:C:G	rs13029710	C	G	C	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr2	227654661	227654662	chr2:227654662:G:A	rs10188499	G	A	G	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr2	227753289	227753290	chr2:227753290:A:G	rs6726367	A	G	A	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr2	227753331	227753332	chr2:227753332:A:G	rs4364015	A	G	G	Hoxd9_MA0913.1	29	0	+	0	0	.
chr2	227762251	227762252	chr2:227762252:C:T	rs141440881	C	T	T	Hoxd9_MA0913.1	27	0	-	0	0	.
chr2	227762264	227762265	chr2:227762265:T:A	rs114070567	T	A	A	Hoxd9_MA0913.1	14	0	-	0	0	.
chr2	227762290	227762291	chr2:227762291:A:G	rs145208856	A	G	A	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr2	228486437	228486438	chr2:228486438:G:A	rs4973087	G	A	G	Hoxd9_MA0913.1	12	0	-	0	0	.
chr2	229044918	229044919	chr2:229044919:G:A	rs6717417	G	A	A	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr2	229124312	229124313	chr2:229124313:C:T	rs1319273	C	T	C	Hoxd9_MA0913.1	23	0	-	0	0	.
chr2	229142061	229142062	chr2:229142062:C:T	rs62190382	C	T	C	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr2	229246577	229246578	chr2:229246578:T:C	rs56179221	T	C	C	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr2	229350215	229350216	chr2:229350216:T:C	rs9288645	T	C	C	Hoxd9_MA0913.1	6	1	-	8.678133135028622	1.8627124672492799	GCAATTAAAC
chr2	229350234	229350235	chr2:229350235:A:T	rs9288646	A	T	A	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr2	229986046	229986047	chr2:229986047:G:A	rs2396702	G	A	a	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr2	230178762	230178763	chr2:230178763:C:G	rs35574529	C	G	C	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr2	230318696	230318697	chr2:230318697:A:G	rs720976	A	G	g	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr2	230860692	230860693	chr2:230860693:A:C	rs2438304	A	C	A	Hoxd9_MA0913.1	17	0	-	0	0	.
chr2	230896376	230896377	chr2:230896377:C:T	rs55946917	C	T	C	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr2	230896391	230896392	chr2:230896392:G:C	rs72997240	G	C	G	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr2	231057928	231057929	chr2:231057929:C:T	rs1370465221	C	T	C	Hoxd9_MA0913.1	22	0	-	0	0	.
chr2	231162581	231162582	chr2:231162582:G:A	rs113246229	G	A	A	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr2	231168395	231168396	chr2:231168396:G:A	rs189929827	G	A	G	Hoxd9_MA0913.1	10	0	+	0	0	.
chr2	231365387	231365388	chr2:231365388:G:A	rs138450408	G	A	G	Hoxd9_MA0913.1	15	0	+	0	0	.
chr2	231411939	231411940	chr2:231411940:T:C	rs12998237	T	C	T	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr2	231516586	231516587	chr2:231516587:T:C	rs11685196	T	C	C	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr2	231893244	231893245	chr2:231893245:C:T	rs146175816	C	T	C	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr2	232286246	232286247	chr2:232286247:C:G	rs114029039	C	G	C	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr2	232548109	232548110	chr2:232548110:A:G	rs4973539	A	G	A	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr2	232659710	232659711	chr2:232659711:C:T	rs116553920	C	T	C	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr2	233297857	233297858	chr2:233297858:T:C	rs10195395	T	C	T	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr2	233361045	233361046	chr2:233361046:T:G	rs11676845	T	G	T	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr2	233430430	233430431	chr2:233430431:C:T	rs115907647	C	T	C	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr2	233868805	233868806	chr2:233868806:A:G	rs144371539	A	G	A	Hoxd9_MA0913.1	4	1	-	9.453206344661718	6.161072092886739	GTAATAAAAA
chr2	234051376	234051377	chr2:234051377:C:T	rs11563197	C	T	T	Hoxd9_MA0913.1	25	0	-	0	0	.
chr2	234241148	234241149	chr2:234241149:G:A	rs113197087	G	A	G	Hoxd9_MA0913.1	14	0	+	0	0	.
chr2	234285388	234285389	chr2:234285389:A:G	rs73130574	A	G	G	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr2	234309266	234309267	chr2:234309267:A:G	rs11886494	A	G	A	Hoxd9_MA0913.1	10	0	-	0	0	.
chr2	234401201	234401202	chr2:234401202:T:C	rs72971681	T	C	C	Hoxd9_MA0913.1	25	0	-	0	0	.
chr2	234444878	234444879	chr2:234444879:A:G	rs143165483	A	G	a	Hoxd9_MA0913.1	4	1	-	9.453206344661718	6.161072092886739	GTAATAAAAA
chr2	234448784	234448785	chr2:234448785:C:T	rs76766689	C	T	C	Hoxd9_MA0913.1	0	1	-	9.760171550280933	8.812437826870472	GCAATTAAAA
chr2	234495144	234495145	chr2:234495145:T:A	rs113211016	T	A	T	Hoxd9_MA0913.1	27	0	-	0	0	.
chr2	234495151	234495152	chr2:234495152:T:A	rs6719230	T	A	-	Hoxd9_MA0913.1	20	0	-	0	0	.
chr2	234604598	234604599	chr2:234604599:A:G	rs72981687	A	G	G	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr2	234629783	234629784	chr2:234629784:T:A	rs72985559	T	A	T	Hoxd9_MA0913.1	26	0	-	0	0	.
chr2	234636085	234636086	chr2:234636086:G:A	rs147480329	G	A	G	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr2	234674675	234674676	chr2:234674676:T:C	rs753802062	T	C	T	Hoxd9_MA0913.1	16	0	+	0	0	.
chr2	234710971	234710972	chr2:234710972:A:G	rs61476502	A	G	A	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr2	234817980	234817981	chr2:234817981:C:T	rs55953425	C	T	C	Hoxd9_MA0913.1	20	0	+	0	0	.
chr2	234881612	234881613	chr2:234881613:A:G	rs4663516	A	G	G	Hoxd9_MA0913.1	13	0	+	0	0	.
chr2	234899566	234899567	chr2:234899567:A:G	rs6431311	A	G	G	Hoxd9_MA0913.1	22	0	-	0	0	.
chr2	234970862	234970863	chr2:234970863:G:T	rs56709153	G	T	T	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr2	235059412	235059413	chr2:235059413:T:G	rs77402002	T	G	T	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr2	235106890	235106891	chr2:235106891:C:T	rs4233619	C	T	C	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr2	235117053	235117054	chr2:235117054:G:A	rs78668086	G	A	G	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr2	235236286	235236287	chr2:235236287:A:C	rs7605655	A	C	C	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr2	235340295	235340296	chr2:235340296:G:A	rs6728599	G	A	A	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr2	235480584	235480585	chr2:235480585:G:A	rs4663593	G	A	A	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr2	235480624	235480625	chr2:235480625:G:A	chr2:235480625:G:A	G	A	G	Hoxd9_MA0913.1	22	0	+	0	0	.
chr2	235480625	235480626	chr2:235480626:G:A	chr2:235480626:G:A	G	A	G	Hoxd9_MA0913.1	23	0	+	0	0	.
chr2	235594302	235594303	chr2:235594303:A:G	rs76347557	A	G	A	Hoxd9_MA0913.1	23	0	-	0	0	.
chr2	235868980	235868981	chr2:235868981:A:G	rs6741609	A	G	G	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr2	235912054	235912055	chr2:235912055:T:G	rs6754465	T	G	G	Hoxd9_MA0913.1	5	1	-	7.801678332738202	4.366876561368833	GCAATAAACA
chr2	236036075	236036076	chr2:236036076:C:G	rs2123510	C	G	C	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr2	236630573	236630574	chr2:236630574:G:A	chr2:236630574:G:A	G	A	T	Hoxd9_MA0913.1	13	0	-	0	0	.
chr2	236630573	236630574	chr2:236630574:G:T	rs113962993	G	T	T	Hoxd9_MA0913.1	13	0	-	0	0	.
chr2	236721292	236721293	chr2:236721293:C:T	rs115807601	C	T	C	Hoxd9_MA0913.1	21	0	-	0	0	.
chr2	236769719	236769720	chr2:236769720:T:G	rs77637200	T	G	T	Hoxd9_MA0913.1	25	0	+	0	0	.
chr2	236844813	236844814	chr2:236844814:C:G	rs62186679	C	G	C	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr2	236870585	236870586	chr2:236870586:C:T	rs10164769	C	T	T	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr2	236870591	236870592	chr2:236870592:A:G	rs10177150	A	G	G	Hoxd9_MA0913.1	5	1	+	7.973723031895638	1.7520598789997708	GCAGTAAAAA
chr2	236872549	236872550	chr2:236872550:G:A	rs4077980	G	A	A	Hoxd9_MA0913.1	11	0	-	0	0	.
chr2	236977230	236977231	chr2:236977231:T:C	rs2701323	T	C	C	Hoxd9_MA0913.1	11	0	-	0	0	.
chr2	237020236	237020237	chr2:237020237:T:G	rs935209187	T	G	T	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr2	237118594	237118595	chr2:237118595:A:G	rs73999636	A	G	A	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr2	237298953	237298954	chr2:237298954:G:A	rs112201623	G	A	G	Hoxd9_MA0913.1	29	0	-	0	0	.
chr2	237334820	237334821	chr2:237334821:C:G	rs2270669	C	G	G	Hoxd9_MA0913.1	29	0	+	0	0	.
chr2	237411068	237411069	chr2:237411069:G:A	rs2645783	G	A	G	Hoxd9_MA0913.1	11	0	-	0	0	.
chr2	237445132	237445133	chr2:237445133:T:A	rs10211024	T	A	A	Hoxd9_MA0913.1	8	1	-	7.83890107168488	6.360570469655829	GCGATTAAAT
chr2	237644390	237644391	chr2:237644391:G:C	rs11884594	G	C	C	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr2	237680321	237680322	chr2:237680322:T:C	rs114368180	T	C	T	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr2	237732473	237732474	chr2:237732474:C:T	rs56182016	C	T	C	Hoxd9_MA0913.1	0	1	-	8.293678209511443	7.34594448610098	GCAATTAAAG
chr2	237829744	237829745	chr2:237829745:G:A	rs919973	G	A	A	Hoxd9_MA0913.1	22	0	-	0	0	.
chr2	237867476	237867477	chr2:237867477:T:C	rs76008392	T	C	T	Hoxd9_MA0913.1	0	1	-	8.853608248980283	9.801341972390743	ACAATAAAAA
chr2	237961940	237961941	chr2:237961941:A:C	rs1446929	A	C	A	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr2	238217064	238217065	chr2:238217065:T:C	rs550057675	T	C	T	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr2	238220946	238220947	chr2:238220947:T:C	rs185966518	T	C	T	Hoxd9_MA0913.1	23	0	-	0	0	.
chr2	238220984	238220985	chr2:238220985:A:T	rs13396611	A	T	A	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr2	238492177	238492178	chr2:238492178:A:G	rs12468032	A	G	G	Hoxd9_MA0913.1	25	0	-	0	0	.
chr2	238643429	238643430	chr2:238643430:A:G	rs12987518	A	G	A	Hoxd9_MA0913.1	16	0	+	0	0	.
chr2	238856105	238856106	chr2:238856106:C:T	rs36132310	C	T	c	Hoxd9_MA0913.1	10	0	-	0	0	.
chr2	238883228	238883229	chr2:238883229:C:A	rs4129102	C	A	C	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr2	238883229	238883230	chr2:238883230:G:A	rs4129104	G	A	G	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr2	238942813	238942814	chr2:238942814:C:T	rs11681016	C	T	T	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr2	238942822	238942823	chr2:238942823:G:A	rs6749150	G	A	A	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr2	238942849	238942850	chr2:238942850:G:A	rs113066407	G	A	G	Hoxd9_MA0913.1	16	0	+	0	0	.
chr2	238998847	238998848	chr2:238998848:C:T	rs4852116	C	T	C	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr2	239055437	239055438	chr2:239055438:C:T	rs62189526	C	T	C	Hoxd9_MA0913.1	23	0	+	0	0	.
chr2	239206329	239206330	chr2:239206330:A:T	rs3828227	A	T	A	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr2	239348901	239348902	chr2:239348902:G:A	rs138026579	G	A	G	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr2	239580422	239580423	chr2:239580423:T:C	rs7570018	T	C	T	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr2	239898216	239898217	chr2:239898217:A:C	rs72999707	A	C	C	Hoxd9_MA0913.1	10	0	+	0	0	.
chr2	239898218	239898219	chr2:239898219:T:C	rs72999711	T	C	C	Hoxd9_MA0913.1	12	0	+	0	0	.
chr2	240130822	240130823	chr2:240130823:A:G	rs1866646	A	G	a	Hoxd9_MA0913.1	27	0	-	0	0	.
chr2	240557095	240557096	chr2:240557096:T:A	rs189553758	T	A	T	Hoxd9_MA0913.1	17	0	-	0	0	.
chr2	240974923	240974924	chr2:240974924:A:G	rs10804401	A	G	G	Hoxd9_MA0913.1	4	1	-	9.801341972390743	6.509207720615763	GCAATAAAAA
chr2	241102790	241102791	chr2:241102791:A:G	rs140221640	A	G	A	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr2	241174097	241174098	chr2:241174098:A:G	rs6437244	A	G	A	Hoxd9_MA0913.1	3	1	+	7.943390935685037	6.115771995189933	GCAATTAAGT
chr2	241829563	241829564	chr2:241829564:A:G	rs11676038	A	G	-	Hoxd9_MA0913.1	5	1	+	8.879672775420401	2.658009622524533	GCCATAAAAA
chr2	241942763	241942764	chr2:241942764:C:T	rs6422701	C	T	.	Hoxd9_MA0913.1	27	0	-	0	0	.
chr20	889502	889503	chr20:889503:C:T	rs6140552	C	T	T	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr20	953856	953857	chr20:953857:G:T	rs6056178	G	T	G	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr20	971392	971393	chr20:971393:G:A	rs79484959	G	A	G	Hoxd9_MA0913.1	26	0	-	0	0	.
chr20	1058094	1058095	chr20:1058095:C:T	rs73573790	C	T	C	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr20	1151864	1151865	chr20:1151865:G:A	rs78215051	G	A	G	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr20	1330043	1330044	chr20:1330044:C:T	rs13044351	C	T	C	Hoxd9_MA0913.1	0	1	-	8.879672775420401	7.931939052009941	GCCATAAAAA
chr20	1400256	1400257	chr20:1400257:C:G	rs6033659	C	G	C	Hoxd9_MA0913.1	21	0	+	0	0	.
chr20	1400381	1400382	chr20:1400382:A:T	rs59681252	A	T	A	Hoxd9_MA0913.1	2	1	+	8.812437826870472	2.3620937950196907	ACAATTAAAA
chr20	1415148	1415149	chr20:1415149:A:C	rs8124053	A	C	A	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr20	1418804	1418805	chr20:1418805:A:G	rs73067251	A	G	A	Hoxd9_MA0913.1	7	1	+	9.760171550280933	2.9210270729265893	GCAATTAAAA
chr20	1477858	1477859	chr20:1477859:C:G	rs6074680	C	G	G	Hoxd9_MA0913.1	0	1	-	9.453206344661718	7.97520767627846	GTAATAAAAA
chr20	1524345	1524346	chr20:1524346:T:G	rs2251801	T	G	G	Hoxd9_MA0913.1	10	0	-	0	0	.
chr20	1740380	1740381	chr20:1740381:A:G	rs6135852	A	G	A	Hoxd9_MA0913.1	16	0	+	0	0	.
chr20	1816544	1816545	chr20:1816545:A:G	rs181568628	A	G	A	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr20	1945628	1945629	chr20:1945629:C:T	rs6136501	C	T	C	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr20	2150247	2150248	chr20:2150248:A:G	rs6106287	A	G	A	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr20	2252605	2252606	chr20:2252606:C:T	rs2064846	C	T	T	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr20	2252607	2252608	chr20:2252608:T:A	rs2064847	T	A	T	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr20	2338780	2338781	chr20:2338781:A:C	rs545422773	A	C	A	Hoxd9_MA0913.1	7	1	+	8.635860738282448	5.342013986564017	GCCATAAAAT
chr20	2454999	2455000	chr20:2455000:A:T	rs6114328	A	T	a	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr20	2455025	2455026	chr20:2455026:G:A	rs78711163	G	A	G	Hoxd9_MA0913.1	22	0	+	0	0	.
chr20	2561056	2561057	chr20:2561057:C:T	rs6036964	C	T	T	Hoxd9_MA0913.1	13	0	-	0	0	.
chr20	2571668	2571669	chr20:2571669:G:A	rs57571603	G	A	G	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr20	2688109	2688110	chr20:2688110:G:T	rs78367681	G	T	G	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr20	2688114	2688115	chr20:2688115:T:C	rs113258930	T	C	C	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr20	2688116	2688117	chr20:2688117:T:G	rs16988041	T	G	T	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr20	2820231	2820232	chr20:2820232:G:A	rs571706252	G	A	G	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr20	2879576	2879577	chr20:2879577:C:G	rs61091656	C	G	G	Hoxd9_MA0913.1	17	0	-	0	0	.
chr20	3093625	3093626	chr20:3093626:G:A	rs142969032	G	A	G	Hoxd9_MA0913.1	26	0	+	0	0	.
chr20	3316344	3316345	chr20:3316345:G:A	rs6051737	G	A	G	Hoxd9_MA0913.1	14	0	+	0	0	.
chr20	3406439	3406440	chr20:3406440:C:T	rs905208967	C	T	C	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr20	3478398	3478399	chr20:3478399:T:C	rs542544901	T	C	t	Hoxd9_MA0913.1	22	0	+	0	0	.
chr20	3563568	3563569	chr20:3563569:G:A	rs237640	G	A	G	Hoxd9_MA0913.1	8	1	-	7.760507910628393	8.281840948251881	GCAATTAACA
chr20	3613441	3613442	chr20:3613442:A:T	rs670717	A	T	A	Hoxd9_MA0913.1	25	0	-	0	0	.
chr20	3622493	3622494	chr20:3622494:A:G	rs2753980	A	G	A	Hoxd9_MA0913.1	19	0	-	0	0	.
chr20	3810228	3810229	chr20:3810229:T:C	rs6139209	T	C	C	Hoxd9_MA0913.1	15	0	+	0	0	.
chr20	3885547	3885548	chr20:3885548:A:G	rs79823136	A	G	a	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr20	3934741	3934742	chr20:3934742:G:C	rs75609382	G	C	G	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr20	3935846	3935847	chr20:3935847:T:C	rs181806262	T	C	T	Hoxd9_MA0913.1	8	1	-	8.03836084475972	6.4653922673017785	CCAATTAAAT
chr20	4013961	4013962	chr20:4013962:T:C	rs2143234	T	C	C	Hoxd9_MA0913.1	26	0	-	0	0	.
chr20	4057034	4057035	chr20:4057035:T:C	rs1891428	T	C	C	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr20	4308418	4308419	chr20:4308419:C:G	rs8123338	C	G	G	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr20	4308423	4308424	chr20:4308424:T:C	rs8118540	T	C	T	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr20	4319013	4319014	chr20:4319014:G:C	rs73586655	G	C	G	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr20	4470434	4470435	chr20:4470435:C:T	rs76114410	C	T	C	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr20	4484832	4484833	chr20:4484833:C:T	rs60920819	C	T	G	Hoxd9_MA0913.1	10	0	+	0	0	.
chr20	4591273	4591274	chr20:4591274:A:C	rs34552667	A	C	A	Hoxd9_MA0913.1	1	1	-	8.531537147691377	5.787107763135689	GTCATAAAAA
chr20	4667891	4667892	chr20:4667892:A:G	rs2025115	A	G	G	Hoxd9_MA0913.1	12	0	+	0	0	.
chr20	4702344	4702345	chr20:4702345:T:C	rs7264175	T	C	T	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr20	4711554	4711555	chr20:4711555:C:A	rs6052782	C	A	c	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr20	4745468	4745469	chr20:4745469:C:T	rs6052819	C	T	C	Hoxd9_MA0913.1	16	0	-	0	0	.
chr20	4745469	4745470	chr20:4745470:A:G	rs2422942	A	G	G	Hoxd9_MA0913.1	15	0	-	0	0	.
chr20	4833241	4833242	chr20:4833242:C:T	rs2423065	C	T	C	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr20	4869901	4869902	chr20:4869902:G:A	rs11699954	G	A	A	Hoxd9_MA0913.1	14	0	-	0	0	.
chr20	4869931	4869932	chr20:4869932:T:G	rs780803712	T	G	T	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr20	5136303	5136304	chr20:5136304:T:C	rs11698682	T	C	T	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr20	5299218	5299219	chr20:5299219:A:G	rs140014838	A	G	A	Hoxd9_MA0913.1	27	0	-	0	0	.
chr20	5299256	5299257	chr20:5299257:T:C	rs6053271	T	C	T	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr20	5647610	5647611	chr20:5647611:T:A	rs6053567	T	A	T	Hoxd9_MA0913.1	5	1	-	8.531537147691377	8.490366725581566	GTCATAAAAA
chr20	5684974	5684975	chr20:5684975:T:G	rs77804986	T	G	T	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr20	5736259	5736260	chr20:5736260:A:C	rs73592934	A	C	A	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr20	5819815	5819816	chr20:5819816:A:G	rs1294706	A	G	G	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr20	5841711	5841712	chr20:5841712:T:A	rs237090	T	A	A	Hoxd9_MA0913.1	12	0	-	0	0	.
chr20	5841721	5841722	chr20:5841722:T:G	rs237089	T	G	T	Hoxd9_MA0913.1	2	1	-	7.688740572647875	6.767071375677533	GCAGTTAAAT
chr20	6164920	6164921	chr20:6164921:T:A	rs374940065	T	A	T	Hoxd9_MA0913.1	28	0	-	0	0	.
chr20	6529581	6529582	chr20:6529582:C:T	rs1233038	C	T	T	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr20	6710193	6710194	chr20:6710194:C:A	rs6117395	C	A	A	Hoxd9_MA0913.1	17	0	-	0	0	.
chr20	7085463	7085464	chr20:7085464:G:C	rs61620462	G	C	C	Hoxd9_MA0913.1	27	0	-	0	0	.
chr20	7180116	7180117	chr20:7180117:G:T	rs895016483	G	T	G	Hoxd9_MA0913.1	16	0	+	0	0	.
chr20	7369083	7369084	chr20:7369084:C:T	rs2423222	C	T	C	Hoxd9_MA0913.1	28	0	+	0	0	.
chr20	7623511	7623512	chr20:7623512:G:T	rs6038894	G	T	T	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr20	7625125	7625126	chr20:7625126:C:G	rs6117887	C	G	G	Hoxd9_MA0913.1	10	0	+	0	0	.
chr20	7668887	7668888	chr20:7668888:T:C	rs6038917	T	C	T	Hoxd9_MA0913.1	27	0	+	0	0	.
chr20	7758728	7758729	chr20:7758729:C:T	rs6140412	C	T	T	Hoxd9_MA0913.1	21	0	+	0	0	.
chr20	7836059	7836060	chr20:7836060:T:C	rs2423289	T	C	T	Hoxd9_MA0913.1	10	0	-	0	0	.
chr20	7857028	7857029	chr20:7857029:C:T	rs2206461	C	T	T	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr20	7936350	7936351	chr20:7936351:C:G	rs147350883	C	G	C	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr20	8039196	8039197	chr20:8039197:T:C	rs16994361	T	C	C	Hoxd9_MA0913.1	3	1	-	8.329997507299597	6.502378566804492	GTAATTAAAC
chr20	8080129	8080130	chr20:8080130:T:C	rs150594378	T	C	T	Hoxd9_MA0913.1	14	0	-	0	0	.
chr20	8148843	8148844	chr20:8148844:C:A	rs8121126	C	A	A	Hoxd9_MA0913.1	14	0	-	0	0	.
chr20	8176315	8176316	chr20:8176316:A:T	rs146452860	A	T	A	Hoxd9_MA0913.1	8	1	+	9.801341972390743	8.32301137036169	GCAATAAAAA
chr20	8273032	8273033	chr20:8273033:A:G	rs750720633	A	G	A	Hoxd9_MA0913.1	0	1	+	8.812437826870472	9.760171550280933	ACAATTAAAA
chr20	8602731	8602732	chr20:8602732:G:T	rs542686766	G	T	G	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr20	8646174	8646175	chr20:8646175:A:T	rs45496299	A	T	A	Hoxd9_MA0913.1	29	0	-	0	0	.
chr20	8646202	8646203	chr20:8646203:G:A	rs7273982	G	A	G	Hoxd9_MA0913.1	1	1	-	9.55752993525279	9.209394307523764	GCAATAAAAT
chr20	8646211	8646212	chr20:8646212:G:T	rs41275582	G	T	G	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr20	8722560	8722561	chr20:8722561:A:G	rs140035693	A	G	A	Hoxd9_MA0913.1	3	1	+	9.51635951314298	7.688740572647875	GCAATTAAAT
chr20	8885967	8885968	chr20:8885968:T:C	rs73605781	T	C	T	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr20	8903899	8903900	chr20:8903900:G:T	rs4816106	G	T	G	Hoxd9_MA0913.1	11	0	-	0	0	.
chr20	9039191	9039192	chr20:9039192:G:C	rs144577528	G	C	G	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr20	9100747	9100748	chr20:9100748:G:A	rs6056403	G	A	G	Hoxd9_MA0913.1	9	1	-	8.719303557138431	9.55752993525279	GCAATAAAAC
chr20	9156776	9156777	chr20:9156777:A:C	rs6118508	A	C	A	Hoxd9_MA0913.1	9	1	-	8.60979621184233	7.387114908210791	ACAATAAAAT
chr20	9179597	9179598	chr20:9179598:C:T	rs150903817	C	T	C	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr20	9200909	9200910	chr20:9200910:A:G	rs562403331	A	G	A	Hoxd9_MA0913.1	27	0	+	0	0	.
chr20	9408554	9408555	chr20:9408555:T:C	rs924891878	T	C	T	Hoxd9_MA0913.1	16	0	-	0	0	.
chr20	9615140	9615141	chr20:9615141:C:T	rs219857	C	T	C	Hoxd9_MA0913.1	1	1	+	8.334848631621252	7.986713003892226	GCAATAAAAG
chr20	9742352	9742353	chr20:9742353:C:T	rs62192884	C	T	C	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr20	9886487	9886488	chr20:9886488:C:A	rs6039614	C	A	C	Hoxd9_MA0913.1	17	0	+	0	0	.
chr20	10110237	10110238	chr20:10110238:G:A	rs2064655	G	A	G	Hoxd9_MA0913.1	24	0	+	0	0	.
chr20	10376188	10376189	chr20:10376189:C:T	rs6032861	C	T	T	Hoxd9_MA0913.1	18	0	-	0	0	.
chr20	10420424	10420425	chr20:10420425:A:G	rs6133922	A	G	A	Hoxd9_MA0913.1	18	0	+	0	0	.
chr20	10501503	10501504	chr20:10501504:G:A	rs573714206	G	A	G	Hoxd9_MA0913.1	15	0	+	0	0	.
chr20	10505950	10505951	chr20:10505951:T:A	rs147677019	T	A	T	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr20	10553651	10553652	chr20:10553652:C:T	rs138069114	C	T	C	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr20	10569895	10569896	chr20:10569896:C:T	rs76608422	C	T	C	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr20	10596557	10596558	chr20:10596558:G:A	rs111811179	G	A	G	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr20	10667030	10667031	chr20:10667031:A:G	rs1883801	A	G	A	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr20	10675011	10675012	chr20:10675012:C:A	rs73243790	C	A	C	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr20	10720945	10720946	chr20:10720946:G:T	rs6040107	G	T	T	Hoxd9_MA0913.1	21	0	-	0	0	.
chr20	10746011	10746012	chr20:10746012:T:C	rs80139154	T	C	T	Hoxd9_MA0913.1	3	1	-	7.801678332738202	5.974059392243097	GCAATAAACA
chr20	10825322	10825323	chr20:10825323:G:C	rs16991992	G	C	G	Hoxd9_MA0913.1	12	0	+	0	0	.
chr20	10864203	10864204	chr20:10864204:G:A	rs75983573	G	A	G	Hoxd9_MA0913.1	24	0	+	0	0	.
chr20	10983072	10983073	chr20:10983073:C:T	rs4142192	C	T	T	Hoxd9_MA0913.1	19	0	+	0	0	.
chr20	11155425	11155426	chr20:11155426:T:A	rs6104713	T	A	A	Hoxd9_MA0913.1	19	0	+	0	0	.
chr20	11207550	11207551	chr20:11207551:T:A	rs1013498	T	A	A	Hoxd9_MA0913.1	19	0	+	0	0	.
chr20	11245495	11245496	chr20:11245496:T:C	rs4813969	T	C	T	Hoxd9_MA0913.1	16	0	-	0	0	.
chr20	11739079	11739080	chr20:11739080:C:A	rs6109124	C	A	C	Hoxd9_MA0913.1	12	0	-	0	0	.
chr20	11809041	11809042	chr20:11809042:G:T	rs13036730	G	T	G	Hoxd9_MA0913.1	23	0	+	0	0	.
chr20	11881550	11881551	chr20:11881551:G:A	rs6033245	G	A	G	Hoxd9_MA0913.1	12	0	-	0	0	.
chr20	12135727	12135728	chr20:12135728:A:T	rs4312556	A	T	A	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr20	12198596	12198597	chr20:12198597:C:T	rs910670	C	T	T	Hoxd9_MA0913.1	18	0	-	0	0	.
chr20	12358735	12358736	chr20:12358736:G:A	rs4633985	G	A	G	Hoxd9_MA0913.1	28	0	-	0	0	.
chr20	12409510	12409511	chr20:12409511:C:T	rs6104893	C	T	C	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr20	12554774	12554775	chr20:12554775:A:G	rs542323618	A	G	A	Hoxd9_MA0913.1	10	0	-	0	0	.
chr20	12594760	12594761	chr20:12594761:G:A	rs1155538	G	A	G	Hoxd9_MA0913.1	29	0	+	0	0	.
chr20	12829280	12829281	chr20:12829281:C:T	rs616674	C	T	C	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr20	13013353	13013354	chr20:13013354:T:G	rs6078878	T	G	T	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr20	13035491	13035492	chr20:13035492:T:A	rs77431978	T	A	T	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr20	13042053	13042054	chr20:13042054:A:G	rs6041800	A	G	g	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr20	13131742	13131743	chr20:13131743:T:G	rs73085888	T	G	T	Hoxd9_MA0913.1	9	1	-	8.879672775420401	7.7976343601680895	GCCATAAAAA
chr20	13223864	13223865	chr20:13223865:A:G	rs2423720	A	G	A	Hoxd9_MA0913.1	8	1	+	8.879672775420401	7.306704197962459	GCCATAAAAA
chr20	13852783	13852784	chr20:13852784:A:G	rs6134992	A	G	A	Hoxd9_MA0913.1	5	1	+	7.7299109947576845	1.5082478418618173	GCAGTAAAAT
chr20	13873955	13873956	chr20:13873956:A:G	rs75969030	A	G	A	Hoxd9_MA0913.1	27	0	+	0	0	.
chr20	13883774	13883775	chr20:13883775:A:G	rs6079204	A	G	A	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr20	14011847	14011848	chr20:14011848:T:C	rs117593100	T	C	T	Hoxd9_MA0913.1	3	1	-	7.265533775852649	5.437914835357544	GCCATTAAGA
chr20	14308153	14308154	chr20:14308154:G:T	rs1980625	G	T	T	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr20	14525995	14525996	chr20:14525996:G:A	rs2423797	G	A	A	Hoxd9_MA0913.1	22	0	+	0	0	.
chr20	14784763	14784764	chr20:14784764:G:A	rs76406630	G	A	G	Hoxd9_MA0913.1	15	0	+	0	0	.
chr20	14839201	14839202	chr20:14839202:A:G	rs376711	A	G	A	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr20	14897007	14897008	chr20:14897008:C:T	rs6135296	C	T	C	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr20	14897239	14897240	chr20:14897240:G:T	rs6135297	G	T	T	Hoxd9_MA0913.1	10	0	-	0	0	.
chr20	14921680	14921681	chr20:14921681:G:A	rs76069870	G	A	G	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr20	15005223	15005224	chr20:15005224:T:C	rs760635014	T	C	t	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr20	15039371	15039372	chr20:15039372:G:A	rs6034091	G	A	G	Hoxd9_MA0913.1	23	0	-	0	0	.
chr20	15047766	15047767	chr20:15047767:T:C	rs73093967	T	C	T	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr20	15063446	15063447	chr20:15063447:G:C	rs4814334	G	C	G	Hoxd9_MA0913.1	9	1	+	7.986713003892226	8.371167929409406	GTAATAAAAG
chr20	15071016	15071017	chr20:15071017:A:C	rs73897247	A	C	A	Hoxd9_MA0913.1	23	0	+	0	0	.
chr20	15226980	15226981	chr20:15226981:A:G	rs144602746	A	G	A	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr20	15256970	15256971	chr20:15256971:C:T	rs117813844	C	T	C	Hoxd9_MA0913.1	28	0	-	0	0	.
chr20	15347068	15347069	chr20:15347069:T:C	rs146458971	T	C	T	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr20	15976096	15976097	chr20:15976097:G:A	rs1339258	G	A	G	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr20	16179060	16179061	chr20:16179061:T:C	rs113185303	T	C	T	Hoxd9_MA0913.1	21	0	+	0	0	.
chr20	16205732	16205733	chr20:16205733:G:A	rs4814454	G	A	A	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr20	16206440	16206441	chr20:16206441:G:A	rs6135704	G	A	A	Hoxd9_MA0913.1	24	0	+	0	0	.
chr20	16612006	16612007	chr20:16612007:G:A	rs1105623	G	A	G	Hoxd9_MA0913.1	0	1	+	7.4131794346509094	6.4654457112404495	GCCATAAAAG
chr20	16926783	16926784	chr20:16926784:A:C	rs6080495	A	C	C	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr20	16945601	16945602	chr20:16945602:T:C	rs6080501	T	C	T	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr20	17164206	17164207	chr20:17164207:A:G	rs6131911	A	G	G	Hoxd9_MA0913.1	10	0	+	0	0	.
chr20	17164291	17164292	chr20:17164292:C:G	rs6131912	C	G	G	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr20	17270748	17270749	chr20:17270749:A:C	rs6034790	A	C	C	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr20	17573776	17573777	chr20:17573777:T:C	rs34857854	T	C	T	Hoxd9_MA0913.1	11	0	-	0	0	.
chr20	17769822	17769823	chr20:17769823:C:T	rs4814653	C	T	C	Hoxd9_MA0913.1	16	0	-	0	0	.
chr20	17791374	17791375	chr20:17791375:T:C	rs182562325	T	C	T	Hoxd9_MA0913.1	6	1	-	8.838502353310592	2.023081685531251	GCCATTAAAA
chr20	17848635	17848636	chr20:17848636:G:A	rs2745851	G	A	A	Hoxd9_MA0913.1	8	1	-	7.801678332738202	8.32301137036169	GCAATAAACA
chr20	17949661	17949662	chr20:17949662:T:C	rs11697739	T	C	C	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr20	17967722	17967723	chr20:17967723:A:G	rs45462600	A	G	A	Hoxd9_MA0913.1	4	1	-	8.079199333223738	4.787065081448758	GCAATAAATT
chr20	17990909	17990910	chr20:17990910:T:G	rs7010	T	G	T	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr20	18190632	18190633	chr20:18190633:G:A	rs6034989	G	A	G	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr20	18270203	18270204	chr20:18270204:C:T	rs6136338	C	T	C	Hoxd9_MA0913.1	15	0	+	0	0	.
chr20	18289348	18289349	chr20:18289349:C:A	rs61191003	C	A	C	Hoxd9_MA0913.1	22	0	-	0	0	.
chr20	18531027	18531028	chr20:18531028:T:C	rs3762202	T	C	C	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr20	18611725	18611726	chr20:18611726:C:G	rs6081243	C	G	G	Hoxd9_MA0913.1	19	0	-	0	0	.
chr20	18797546	18797547	chr20:18797547:C:G	rs2277864	C	G	C	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr20	18984257	18984258	chr20:18984258:A:T	rs11697191	A	T	A	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr20	19012161	19012162	chr20:19012162:C:G	rs2328344	C	G	C	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr20	19231928	19231929	chr20:19231929:C:T	rs6132179	C	T	C	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr20	19382691	19382692	chr20:19382692:A:G	rs6035315	A	G	G	Hoxd9_MA0913.1	22	0	-	0	0	.
chr20	19454636	19454637	chr20:19454637:C:G	rs1883693	C	G	G	Hoxd9_MA0913.1	16	0	+	0	0	.
chr20	19457216	19457217	chr20:19457217:T:C	rs6081601	T	C	T	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr20	19692447	19692448	chr20:19692448:A:G	rs117713601	A	G	A	Hoxd9_MA0913.1	7	1	+	9.760171550280933	2.9210270729265893	GCAATTAAAA
chr20	19812157	19812158	chr20:19812158:A:G	rs6046335	A	G	A	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr20	19812166	19812167	chr20:19812167:T:C	rs6046336	T	C	C	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr20	20010806	20010807	chr20:20010807:A:T	rs1289605358	A	T	A	Hoxd9_MA0913.1	8	1	+	8.594690316172638	7.116359714143586	GCCATTAAAT
chr20	20203162	20203163	chr20:20203163:G:A	rs6081918	G	A	A	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr20	20211673	20211674	chr20:20211674:C:G	rs73607405	C	G	C	Hoxd9_MA0913.1	26	0	+	0	0	.
chr20	20360688	20360689	chr20:20360689:G:C	rs1410937	G	C	C	Hoxd9_MA0913.1	19	0	+	0	0	.
chr20	20821769	20821770	chr20:20821770:C:T	rs55911011	C	T	C	Hoxd9_MA0913.1	27	0	-	0	0	.
chr20	20860575	20860576	chr20:20860576:T:A	chr20:20860576:T:A	T	A	T	Hoxd9_MA0913.1	6	1	-	8.187202972822991	5.7638830252890045	GCAATTAAGA
chr20	21062528	21062529	chr20:21062529:T:C	rs6082313	T	C	T	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr20	21185240	21185241	chr20:21185241:T:A	chr20:21185241:T:A	T	A	T	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr20	21353012	21353013	chr20:21353013:G:C	rs6082393	G	C	C	Hoxd9_MA0913.1	11	0	-	0	0	.
chr20	21353029	21353030	chr20:21353030:G:A	rs6075794	G	A	A	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr20	22164136	22164137	chr20:22164137:T:C	rs804553	T	C	T	Hoxd9_MA0913.1	29	0	+	0	0	.
chr20	22260764	22260765	chr20:22260765:G:A	rs17814988	G	A	G	Hoxd9_MA0913.1	18	0	+	0	0	.
chr20	22946692	22946693	chr20:22946693:G:A	rs1952972	G	A	G	Hoxd9_MA0913.1	19	0	-	0	0	.
chr20	22974587	22974588	chr20:22974588:A:G	rs1474943302	A	G	A	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr20	23008411	23008412	chr20:23008412:C:T	rs1360407	C	T	T	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr20	23011623	23011624	chr20:23011624:C:T	rs874585	C	T	T	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr20	23076844	23076845	chr20:23076845:T:C	rs1998081	T	C	C	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr20	23099462	23099463	chr20:23099463:A:G	rs844816	A	G	G	Hoxd9_MA0913.1	25	0	-	0	0	.
chr20	23152297	23152298	chr20:23152298:T:C	rs6036322	T	C	C	Hoxd9_MA0913.1	23	0	+	0	0	.
chr20	23258195	23258196	chr20:23258196:T:C	rs138675811	T	C	T	Hoxd9_MA0913.1	23	0	+	0	0	.
chr20	23332054	23332055	chr20:23332055:G:C	rs16985225	G	C	G	Hoxd9_MA0913.1	1	1	-	8.323343304007485	5.230778291722773	CCAATAAAAA
chr20	23383135	23383136	chr20:23383136:G:A	rs6137922	G	A	G	Hoxd9_MA0913.1	24	0	+	0	0	.
chr20	23418087	23418088	chr20:23418088:A:C	chr20:23418088:A:C	A	C	A	Hoxd9_MA0913.1	24	0	-	0	0	.
chr20	23418100	23418101	chr20:23418101:G:C	rs1016628	G	C	C	Hoxd9_MA0913.1	11	0	-	0	0	.
chr20	23643626	23643627	chr20:23643627:G:T	rs73102335	G	T	G	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr20	23724092	23724093	chr20:23724093:C:A	rs62208892	C	A	C	Hoxd9_MA0913.1	0	1	-	8.719303557138431	5.682160861185562	GCAATAAAAC
chr20	23724100	23724101	chr20:23724101:C:A	rs62208893	C	A	A	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr20	23747595	23747596	chr20:23747596:G:T	rs1048314	G	T	G	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr20	24154487	24154488	chr20:24154488:C:T	rs6049446	C	T	T	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr20	24448463	24448464	chr20:24448464:G:A	rs150044802	G	A	G	Hoxd9_MA0913.1	27	0	+	0	0	.
chr20	24448856	24448857	chr20:24448857:T:C	rs6049699	T	C	C	Hoxd9_MA0913.1	13	0	-	0	0	.
chr20	24467898	24467899	chr20:24467899:C:T	rs560525377	C	T	C	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr20	24491954	24491955	chr20:24491955:A:G	rs73101307	A	G	A	Hoxd9_MA0913.1	17	0	+	0	0	.
chr20	24747238	24747239	chr20:24747239:C:T	rs6049944	C	T	C	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr20	24837740	24837741	chr20:24837741:A:C	chr20:24837741:A:C	A	C	A	Hoxd9_MA0913.1	12	0	+	0	0	.
chr20	24897399	24897400	chr20:24897400:A:G	rs6050101	A	G	G	Hoxd9_MA0913.1	22	0	+	0	0	.
chr20	24910116	24910117	chr20:24910117:C:A	rs1029032	C	A	C	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr20	24942620	24942621	chr20:24942621:T:C	rs227644	T	C	T	Hoxd9_MA0913.1	15	0	-	0	0	.
chr20	24973357	24973358	chr20:24973358:C:T	rs7360205	C	T	C	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr20	25224394	25224395	chr20:25224395:C:G	rs2179638	C	G	C	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr20	25271524	25271525	chr20:25271525:C:T	rs2281559	C	T	C	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr20	25398432	25398433	chr20:25398433:C:T	rs2387884	C	T	C	Hoxd9_MA0913.1	19	0	+	0	0	.
chr20	25452899	25452900	chr20:25452900:T:C	rs2856	T	C	C	Hoxd9_MA0913.1	17	0	+	0	0	.
chr20	25558849	25558850	chr20:25558850:G:A	rs6138601	G	A	G	Hoxd9_MA0913.1	18	0	+	0	0	.
chr20	25902612	25902613	chr20:25902613:T:C	rs4121094	T	C	.	Hoxd9_MA0913.1	6	1	-	8.334848631621252	1.5194279638419104	GCAATAAAAG
chr20	29076347	29076348	chr20:29076348:C:G	rs1197683812	C	G	.	Hoxd9_MA0913.1	0	1	-	8.879672775420401	7.4016741070371435	GCCATAAAAA
chr20	29316462	29316463	chr20:29316463:G:T	rs1169813297	G	T	.	Hoxd9_MA0913.1	2	1	-	8.879672775420401	9.801341972390743	GCCATAAAAA
chr20	29329576	29329577	chr20:29329577:G:A	rs1366891439	G	A	.	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr20	29495618	29495619	chr20:29495619:G:A	rs35655085	G	A	.	Hoxd9_MA0913.1	17	0	+	0	0	.
chr20	30288720	30288721	chr20:30288721:T:C	rs1969706	T	C	.	Hoxd9_MA0913.1	14	0	+	0	0	.
chr20	30425008	30425009	chr20:30425009:T:G	rs1441884331	T	G	.	Hoxd9_MA0913.1	18	0	+	0	0	.
chr20	30604118	30604119	chr20:30604119:G:T	rs1388965197	G	T	t	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr20	30889936	30889937	chr20:30889937:C:A	rs2311876	C	A	.	Hoxd9_MA0913.1	10	0	-	0	0	.
chr20	30905892	30905893	chr20:30905893:G:A	rs1475016281	G	A	.	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr20	32015797	32015798	chr20:32015798:C:T	rs73102700	C	T	C	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr20	32015798	32015799	chr20:32015799:G:A	rs74453175	G	A	G	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr20	33647627	33647628	chr20:33647628:G:C	rs957188792	G	C	G	Hoxd9_MA0913.1	17	0	+	0	0	.
chr20	33739592	33739593	chr20:33739593:T:C	rs2626530	T	C	C	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr20	33832649	33832650	chr20:33832650:G:C	rs13043926	G	C	G	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr20	33893686	33893687	chr20:33893687:A:T	rs6059529	A	T	A	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr20	34037988	34037989	chr20:34037989:A:G	rs532111199	A	G	A	Hoxd9_MA0913.1	23	0	-	0	0	.
chr20	34055293	34055294	chr20:34055294:T:C	rs2300209	T	C	T	Hoxd9_MA0913.1	10	0	+	0	0	.
chr20	34114149	34114150	chr20:34114150:T:C	rs68051854	T	C	t	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr20	34151120	34151121	chr20:34151121:A:G	rs117921871	A	G	A	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr20	34164686	34164687	chr20:34164687:G:T	rs6120546	G	T	G	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr20	34583563	34583564	chr20:34583564:G:C	rs932542	G	C	C	Hoxd9_MA0913.1	27	0	+	0	0	.
chr20	34601230	34601231	chr20:34601231:G:A	rs75345986	G	A	A	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr20	34663854	34663855	chr20:34663855:C:T	rs542838755	C	T	C	Hoxd9_MA0913.1	20	0	+	0	0	.
chr20	34966516	34966517	chr20:34966517:T:C	rs7263251	T	C	T	Hoxd9_MA0913.1	7	1	-	8.853608248980283	2.01446377162594	ACAATAAAAA
chr20	34977662	34977663	chr20:34977663:C:T	rs201494323	C	T	C	Hoxd9_MA0913.1	29	0	+	0	0	.
chr20	35148001	35148002	chr20:35148002:G:T	rs115920570	G	T	g	Hoxd9_MA0913.1	12	0	-	0	0	.
chr20	35243383	35243384	chr20:35243384:T:C	rs2425022	T	C	C	Hoxd9_MA0913.1	27	0	-	0	0	.
chr20	35263188	35263189	chr20:35263189:A:T	rs80186136	A	T	A	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr20	35334722	35334723	chr20:35334723:A:G	rs142457045	A	G	A	Hoxd9_MA0913.1	3	1	+	8.60979621184233	6.782177271347225	ACAATAAAAT
chr20	37276919	37276920	chr20:37276920:T:G	rs979608519	T	G	T	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr20	37702017	37702018	chr20:37702018:C:G	rs116431523	C	G	C	Hoxd9_MA0913.1	27	0	-	0	0	.
chr20	37764609	37764610	chr20:37764610:A:G	rs111249079	A	G	A	Hoxd9_MA0913.1	29	0	-	0	0	.
chr20	37868025	37868026	chr20:37868026:G:C	rs909769	G	C	G	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr20	37921994	37921995	chr20:37921995:G:T	rs6013446	G	T	G	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr20	37923522	37923523	chr20:37923523:C:T	rs73096431	C	T	C	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr20	38114562	38114563	chr20:38114563:A:G	rs73905548	A	G	A	Hoxd9_MA0913.1	12	0	-	0	0	.
chr20	38137198	38137199	chr20:38137199:T:C	rs34046288	T	C	T	Hoxd9_MA0913.1	16	0	+	0	0	.
chr20	38189313	38189314	chr20:38189314:G:A	rs6127376	G	A	G	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr20	38204628	38204629	chr20:38204629:G:C	rs6014318	G	C	c	Hoxd9_MA0913.1	10	0	-	0	0	.
chr20	38248465	38248466	chr20:38248466:G:A	rs1205443	G	A	A	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr20	38392509	38392510	chr20:38392510:C:T	rs76648231	C	T	C	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr20	38696381	38696382	chr20:38696382:T:C	rs1830609	T	C	T	Hoxd9_MA0913.1	6	1	-	8.853608248980283	2.0381875812009422	ACAATAAAAA
chr20	38729852	38729853	chr20:38729853:A:T	rs77487556	A	T	A	Hoxd9_MA0913.1	9	1	+	7.801678332738202	7.557866295600249	GCAATAAACA
chr20	38785517	38785518	chr20:38785518:A:G	rs2748673	A	G	G	Hoxd9_MA0913.1	4	1	-	7.986713003892226	4.694578752117247	GTAATAAAAG
chr20	39150925	39150926	chr20:39150926:C:T	rs2235769	C	T	C	Hoxd9_MA0913.1	13	0	-	0	0	.
chr20	39255503	39255504	chr20:39255504:G:C	rs6129232	G	C	A	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr20	39563308	39563309	chr20:39563309:T:C	rs6101610	T	C	C	Hoxd9_MA0913.1	0	1	-	8.568625789732518	9.51635951314298	ACAATTAAAT
chr20	39835845	39835846	chr20:39835846:C:A	rs79664720	C	A	C	Hoxd9_MA0913.1	17	0	-	0	0	.
chr20	39962356	39962357	chr20:39962357:G:A	rs34587927	G	A	G	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr20	40073459	40073460	chr20:40073460:G:T	rs6016241	G	T	G	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr20	40341554	40341555	chr20:40341555:A:C	rs73609361	A	C	C	Hoxd9_MA0913.1	17	0	-	0	0	.
chr20	40711659	40711660	chr20:40711660:T:C	rs2064408	T	C	C	Hoxd9_MA0913.1	27	0	-	0	0	.
chr20	40755798	40755799	chr20:40755799:A:G	rs73300150	A	G	a	Hoxd9_MA0913.1	23	0	+	0	0	.
chr20	40940889	40940890	chr20:40940890:G:A	rs6102227	G	A	A	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr20	40994089	40994090	chr20:40994090:A:C	rs6029507	A	C	A	Hoxd9_MA0913.1	12	0	+	0	0	.
chr20	41076354	41076355	chr20:41076355:G:A	rs6072262	G	A	G	Hoxd9_MA0913.1	16	0	-	0	0	.
chr20	41087463	41087464	chr20:41087464:G:A	rs183191678	G	A	G	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr20	41089826	41089827	chr20:41089827:C:A	rs115746652	C	A	C	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr20	41089840	41089841	chr20:41089841:T:C	rs73259882	T	C	T	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr20	41099222	41099223	chr20:41099223:T:C	rs13037857	T	C	T	Hoxd9_MA0913.1	15	0	-	0	0	.
chr20	41321313	41321314	chr20:41321314:G:T	rs6029626	G	T	G	Hoxd9_MA0913.1	18	0	+	0	0	.
chr20	41433142	41433143	chr20:41433143:T:G	rs34940339	T	G	T	Hoxd9_MA0913.1	11	0	-	0	0	.
chr20	41687565	41687566	chr20:41687566:C:A	rs6102531	C	A	C	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr20	41732360	41732361	chr20:41732361:A:G	rs73127322	A	G	G	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr20	41853914	41853915	chr20:41853915:C:A	rs59242810	C	A	C	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr20	41853944	41853945	chr20:41853945:C:T	rs6513747	C	T	C	Hoxd9_MA0913.1	10	0	+	0	0	.
chr20	42042313	42042314	chr20:42042314:C:A	rs2866940	C	A	A	Hoxd9_MA0913.1	14	0	-	0	0	.
chr20	42262061	42262062	chr20:42262062:C:T	rs16986720	C	T	C	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr20	42434027	42434028	chr20:42434028:A:C	rs10854225	A	C	A	Hoxd9_MA0913.1	16	0	+	0	0	.
chr20	42572803	42572804	chr20:42572804:A:C	rs62203789	A	C	A	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr20	42778646	42778647	chr20:42778647:G:A	rs6093732	G	A	G	Hoxd9_MA0913.1	19	0	+	0	0	.
chr20	43205925	43205926	chr20:43205926:A:G	rs6030697	A	G	A	Hoxd9_MA0913.1	25	0	-	0	0	.
chr20	43205926	43205927	chr20:43205927:A:C	rs6030698	A	C	A	Hoxd9_MA0913.1	24	0	-	0	0	.
chr20	43512947	43512948	chr20:43512948:G:A	rs80129293	G	A	G	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr20	43591727	43591728	chr20:43591728:A:G	rs6017120	A	G	A	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr20	43692631	43692632	chr20:43692632:G:A	rs181578500	G	A	G	Hoxd9_MA0913.1	0	1	+	9.801341972390743	8.853608248980283	GCAATAAAAA
chr20	43926152	43926153	chr20:43926153:A:G	rs6130480	A	G	G	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr20	44154250	44154251	chr20:44154251:G:A	rs116117225	G	A	G	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr20	44186047	44186048	chr20:44186048:G:T	rs2092518	G	T	G	Hoxd9_MA0913.1	17	0	-	0	0	.
chr20	44287840	44287841	chr20:44287841:T:C	rs2868089	T	C	T	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr20	44356714	44356715	chr20:44356715:A:G	rs6031546	A	G	A	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr20	44442708	44442709	chr20:44442709:C:T	rs58438406	C	T	C	Hoxd9_MA0913.1	9	1	+	7.7976343601680895	8.635860738282448	GCCATAAAAC
chr20	44736862	44736863	chr20:44736863:C:T	rs6073534	C	T	C	Hoxd9_MA0913.1	0	1	+	8.079531266869532	6.52038723929992	CCAATAAAAT
chr20	44736868	44736869	chr20:44736869:A:C	rs532289731	A	C	A	Hoxd9_MA0913.1	6	1	+	8.079531266869532	3.6049544042013264	CCAATAAAAT
chr20	44869740	44869741	chr20:44869741:G:T	rs2142563	G	T	G	Hoxd9_MA0913.1	26	0	+	0	0	.
chr20	44941403	44941404	chr20:44941404:A:G	rs16989514	A	G	A	Hoxd9_MA0913.1	14	0	+	0	0	.
chr20	45018052	45018053	chr20:45018053:A:G	rs6065773	A	G	A	Hoxd9_MA0913.1	20	0	+	0	0	.
chr20	45121476	45121477	chr20:45121477:T:C	rs62206433	T	C	t	Hoxd9_MA0913.1	23	0	-	0	0	.
chr20	45345096	45345097	chr20:45345097:G:T	rs2743389	G	T	T	Hoxd9_MA0913.1	13	0	+	0	0	.
chr20	45592760	45592761	chr20:45592761:G:C	rs534951665	G	C	G	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr20	45592765	45592766	chr20:45592766:G:A	rs185978108	G	A	G	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr20	45598580	45598581	chr20:45598581:G:A	rs3091658	G	A	A	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr20	45779265	45779266	chr20:45779266:G:A	rs147445647	G	A	G	Hoxd9_MA0913.1	0	1	+	8.293678209511443	7.34594448610098	GCAATTAAAG
chr20	45937875	45937876	chr20:45937876:C:T	rs555710464	C	T	C	Hoxd9_MA0913.1	26	0	+	0	0	.
chr20	46127249	46127250	chr20:46127250:G:A	rs11569333	G	A	G	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr20	46463924	46463925	chr20:46463925:C:G	rs41283028	C	G	C	Hoxd9_MA0913.1	20	0	+	0	0	.
chr20	46756189	46756190	chr20:46756190:A:G	rs6124861	A	G	A	Hoxd9_MA0913.1	25	0	-	0	0	.
chr20	46810735	46810736	chr20:46810736:C:A	rs6094487	C	A	C	Hoxd9_MA0913.1	0	1	-	9.55752993525279	6.52038723929992	GCAATAAAAT
chr20	46866043	46866044	chr20:46866044:G:T	rs62201177	G	T	G	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr20	46951614	46951615	chr20:46951615:G:A	rs1199897102	G	A	G	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr20	46951650	46951651	chr20:46951651:G:A	rs3092262	G	A	G	Hoxd9_MA0913.1	27	0	+	0	0	.
chr20	47111859	47111860	chr20:47111860:A:G	rs6018285	A	G	A	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr20	47124202	47124203	chr20:47124203:C:G	rs754963009	C	G	C	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr20	47226959	47226960	chr20:47226960:C:A	rs11906329	C	A	C	Hoxd9_MA0913.1	21	0	-	0	0	.
chr20	47267054	47267055	chr20:47267055:C:T	rs713164	C	T	T	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr20	47267084	47267085	chr20:47267085:G:A	rs7261717	G	A	G	Hoxd9_MA0913.1	27	0	+	0	0	.
chr20	47569358	47569359	chr20:47569359:C:T	rs6018556	C	T	-	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr20	47573600	47573601	chr20:47573601:C:T	rs6066390	C	T	C	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr20	47764337	47764338	chr20:47764338:C:G	rs6063150	C	G	G	Hoxd9_MA0913.1	19	0	+	0	0	.
chr20	47806522	47806523	chr20:47806523:G:A	rs6094862	G	A	G	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr20	47806679	47806680	chr20:47806680:T:C	rs6125123	T	C	T	Hoxd9_MA0913.1	6	1	-	8.879672775420401	2.064252107641061	GCCATAAAAA
chr20	47806697	47806698	chr20:47806698:G:A	rs6125124	G	A	G	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr20	47806705	47806706	chr20:47806706:G:A	rs6125125	G	A	G	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr20	48132031	48132032	chr20:48132032:C:T	rs62201133	C	T	C	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr20	48234537	48234538	chr20:48234538:G:A	rs62202425	G	A	A	Hoxd9_MA0913.1	16	0	-	0	0	.
chr20	48595807	48595808	chr20:48595808:T:C	rs6095196	T	C	T	Hoxd9_MA0913.1	19	0	-	0	0	.
chr20	49001955	49001956	chr20:49001956:C:T	rs4810907	C	T	T	Hoxd9_MA0913.1	11	0	+	0	0	.
chr20	49275732	49275733	chr20:49275733:T:C	rs238191	T	C	C	Hoxd9_MA0913.1	7	1	-	7.986713003892226	1.1475685265378834	GTAATAAAAG
chr20	49614282	49614283	chr20:49614283:A:G	rs235016	A	G	G	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr20	49631014	49631015	chr20:49631015:A:G	rs1015099527	A	G	A	Hoxd9_MA0913.1	1	1	-	9.453206344661718	9.801341972390743	GTAATAAAAA
chr20	49711162	49711163	chr20:49711163:G:A	rs1571367	G	A	G	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr20	49718981	49718982	chr20:49718982:C:A	rs35854666	C	A	C	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr20	49736135	49736136	chr20:49736136:T:G	rs7344757	T	G	T	Hoxd9_MA0913.1	14	0	+	0	0	.
chr20	49762202	49762203	chr20:49762203:A:G	rs6095646	A	G	G	Hoxd9_MA0913.1	4	1	-	9.760171550280933	6.468037298505953	GCAATTAAAA
chr20	50070877	50070878	chr20:50070878:A:T	rs9712448	A	T	T	Hoxd9_MA0913.1	12	0	-	0	0	.
chr20	50224951	50224952	chr20:50224952:A:C	rs576236895	A	C	A	Hoxd9_MA0913.1	21	0	+	0	0	.
chr20	50355232	50355233	chr20:50355233:T:G	rs6095881	T	G	t	Hoxd9_MA0913.1	3	1	-	9.209394307523764	4.7431636371237085	GTAATAAAAT
chr20	50412149	50412150	chr20:50412150:G:A	rs384031	G	A	A	Hoxd9_MA0913.1	18	0	-	0	0	.
chr20	50502292	50502293	chr20:50502293:A:G	rs117021215	A	G	A	Hoxd9_MA0913.1	1	1	-	8.490366725581566	8.838502353310592	GTCATTAAAA
chr20	50511702	50511703	chr20:50511703:G:A	rs6020572	G	A	A	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr20	50600965	50600966	chr20:50600966:T:C	rs118150973	T	C	T	Hoxd9_MA0913.1	14	0	+	0	0	.
chr20	50720094	50720095	chr20:50720095:A:C	rs405926	A	C	A	Hoxd9_MA0913.1	11	0	+	0	0	.
chr20	50804509	50804510	chr20:50804510:G:A	rs78309623	G	A	G	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr20	50805154	50805155	chr20:50805155:G:A	rs76675039	G	A	G	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr20	50887263	50887264	chr20:50887264:C:G	rs6020826	C	G	C	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr20	51093506	51093507	chr20:51093507:G:A	rs73123322	G	A	G	Hoxd9_MA0913.1	3	1	+	7.973723031895638	9.801341972390743	GCAGTAAAAA
chr20	51093516	51093517	chr20:51093517:C:T	rs73123327	C	T	C	Hoxd9_MA0913.1	13	0	+	0	0	.
chr20	51127011	51127012	chr20:51127012:C:T	rs6067654	C	T	T	Hoxd9_MA0913.1	0	1	-	9.51635951314298	8.568625789732518	GCAATTAAAT
chr20	51129661	51129662	chr20:51129662:T:C	rs230021	T	C	C	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr20	51159942	51159943	chr20:51159943:T:C	rs17727534	T	C	T	Hoxd9_MA0913.1	4	1	+	8.531537147691377	5.239402895916397	GTCATAAAAA
chr20	51159949	51159950	chr20:51159950:G:A	rs10485617	G	A	G	Hoxd9_MA0913.1	11	0	+	0	0	.
chr20	51561630	51561631	chr20:51561631:A:G	rs57387078	A	G	A	Hoxd9_MA0913.1	15	0	-	0	0	.
chr20	51584352	51584353	chr20:51584353:T:A	rs6067832	T	A	T	Hoxd9_MA0913.1	21	0	+	0	0	.
chr20	51648539	51648540	chr20:51648540:A:T	rs2426340	A	T	T	Hoxd9_MA0913.1	11	0	+	0	0	.
chr20	51769949	51769950	chr20:51769950:G:C	rs6091366	G	C	G	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr20	51833585	51833586	chr20:51833586:G:T	rs117374538	G	T	G	Hoxd9_MA0913.1	8	1	+	8.187202972822991	8.281840948251881	GCAATTAAGA
chr20	51833592	51833593	chr20:51833593:T:A	rs77594813	T	A	T	Hoxd9_MA0913.1	15	0	+	0	0	.
chr20	51860555	51860556	chr20:51860556:C:A	rs760191444	C	A	C	Hoxd9_MA0913.1	1	1	+	7.760507910628393	5.340689534603133	GCAATTAACA
chr20	51876573	51876574	chr20:51876574:A:C	rs8120164	A	C	C	Hoxd9_MA0913.1	11	0	-	0	0	.
chr20	51918883	51918884	chr20:51918884:T:A	rs76882418	T	A	T	Hoxd9_MA0913.1	3	1	-	8.038028911113928	4.423689041984944	GCAATTAATT
chr20	51934152	51934153	chr20:51934153:A:T	rs4809880	A	T	A	Hoxd9_MA0913.1	19	0	-	0	0	.
chr20	51934153	51934154	chr20:51934154:C:A	rs4811268	C	A	C	Hoxd9_MA0913.1	18	0	-	0	0	.
chr20	52113773	52113774	chr20:52113774:C:G	rs6096760	C	G	G	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr20	52194364	52194365	chr20:52194365:C:T	rs6096807	C	T	c	Hoxd9_MA0913.1	22	0	-	0	0	.
chr20	52410879	52410880	chr20:52410880:G:C	rs4811347	G	C	C	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr20	52542600	52542601	chr20:52542601:T:G	rs12479745	T	G	T	Hoxd9_MA0913.1	2	1	-	8.2283733949328	7.306704197962459	GCAATAAAGA
chr20	52542612	52542613	chr20:52542613:G:A	rs6126595	G	A	G	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr20	52668669	52668670	chr20:52668670:G:T	rs1883529	G	T	T	Hoxd9_MA0913.1	13	0	+	0	0	.
chr20	52780507	52780508	chr20:52780508:G:C	rs6068339	G	C	G	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr20	52942151	52942152	chr20:52942152:A:G	rs2002694	A	G	G	Hoxd9_MA0913.1	12	0	+	0	0	.
chr20	53028439	53028440	chr20:53028440:C:T	rs777629124	C	T	C	Hoxd9_MA0913.1	0	1	-	7.801678332738202	6.853944609327742	GCAATAAACA
chr20	53077731	53077732	chr20:53077732:T:C	rs77466359	T	C	T	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr20	53126608	53126609	chr20:53126609:G:A	rs2904296	G	A	G	Hoxd9_MA0913.1	0	1	+	8.594690316172638	7.646956592762177	GCCATTAAAT
chr20	53154406	53154407	chr20:53154407:C:T	rs11696852	C	T	C	Hoxd9_MA0913.1	18	0	+	0	0	.
chr20	53185116	53185117	chr20:53185117:A:T	rs2904357	A	T	A	Hoxd9_MA0913.1	22	0	-	0	0	.
chr20	53223777	53223778	chr20:53223778:A:G	rs6022342	A	G	A	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr20	53283576	53283577	chr20:53283577:A:G	rs2741359	A	G	G	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr20	53328972	53328973	chr20:53328973:A:C	rs13044509	A	C	A	Hoxd9_MA0913.1	24	0	+	0	0	.
chr20	53384450	53384451	chr20:53384451:G:A	rs6022437	G	A	G	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr20	53580084	53580085	chr20:53580085:T:C	rs115996963	T	C	T	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr20	53580839	53580840	chr20:53580840:G:A	rs190337173	G	A	G	Hoxd9_MA0913.1	27	0	-	0	0	.
chr20	53591435	53591436	chr20:53591436:T:G	rs34077406	T	G	T	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr20	53596605	53596606	chr20:53596606:A:C	rs182331540	A	C	A	Hoxd9_MA0913.1	23	0	+	0	0	.
chr20	53736650	53736651	chr20:53736651:G:A	rs16998352	G	A	G	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr20	53857862	53857863	chr20:53857863:A:G	rs1010989813	A	G	A	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr20	53872884	53872885	chr20:53872885:G:A	rs11700330	G	A	G	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr20	54068384	54068385	chr20:54068385:C:A	rs6068765	C	A	C	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr20	54070692	54070693	chr20:54070693:A:G	rs6127084	A	G	A	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr20	54140223	54140224	chr20:54140224:G:A	rs76341090	G	A	G	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr20	54140235	54140236	chr20:54140236:A:C	rs187256050	A	C	A	Hoxd9_MA0913.1	7	1	+	9.453206344661718	6.159359592943288	GTAATAAAAA
chr20	54180334	54180335	chr20:54180335:C:T	rs2756031	C	T	C	Hoxd9_MA0913.1	19	0	-	0	0	.
chr20	54185246	54185247	chr20:54185247:C:T	rs77954161	C	T	C	Hoxd9_MA0913.1	24	0	-	0	0	.
chr20	54203360	54203361	chr20:54203361:C:T	rs1578782	C	T	C	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr20	54636880	54636881	chr20:54636881:G:A	rs55637621	G	A	A	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr20	54669092	54669093	chr20:54669093:G:T	rs111894951	G	T	G	Hoxd9_MA0913.1	22	0	+	0	0	.
chr20	54863118	54863119	chr20:54863119:A:G	rs6023655	A	G	G	Hoxd9_MA0913.1	5	1	+	8.123883530932645	1.902220378036776	GCGATAAAAA
chr20	55173849	55173850	chr20:55173850:C:T	rs12329514	C	T	C	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr20	55561506	55561507	chr20:55561507:T:C	rs6069315	T	C	T	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr20	55655938	55655939	chr20:55655939:T:G	rs6024269	T	G	G	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr20	55693599	55693600	chr20:55693600:C:A	rs559236100	C	A	C	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr20	55702509	55702510	chr20:55702510:T:C	rs7270653	T	C	T	Hoxd9_MA0913.1	21	0	-	0	0	.
chr20	55702525	55702526	chr20:55702526:A:C	rs8115796	A	C	A	Hoxd9_MA0913.1	5	1	-	7.265533775852649	1.0850410450665908	GCCATTAAGA
chr20	56205416	56205417	chr20:56205417:A:C	rs75249040	A	C	A	Hoxd9_MA0913.1	14	0	+	0	0	.
chr20	56268968	56268969	chr20:56268969:A:G	rs1326022	A	G	A	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr20	56544544	56544545	chr20:56544545:G:A	rs143942417	G	A	G	Hoxd9_MA0913.1	26	0	+	0	0	.
chr20	56722062	56722063	chr20:56722063:C:T	rs1275240256	C	T	C	Hoxd9_MA0913.1	10	0	-	0	0	.
chr20	56818987	56818988	chr20:56818988:C:T	rs6014832	C	T	T	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr20	56826682	56826683	chr20:56826683:G:A	rs17470924	G	A	G	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr20	57168393	57168394	chr20:57168394:G:A	rs11086596	G	A	G	Hoxd9_MA0913.1	20	0	-	0	0	.
chr20	57168432	57168433	chr20:57168433:C:A	rs138625707	C	A	C	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr20	57258402	57258403	chr20:57258403:G:C	rs769079879	G	C	G	Hoxd9_MA0913.1	14	0	+	0	0	.
chr20	57361825	57361826	chr20:57361826:A:G	rs2426708	A	G	A	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr20	57380032	57380033	chr20:57380033:C:T	rs193014	C	T	C	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr20	57433495	57433496	chr20:57433496:C:G	rs13037687	C	G	c	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr20	57468571	57468572	chr20:57468572:A:G	rs2865378	A	G	A	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr20	57654013	57654014	chr20:57654014:A:C	rs138353982	A	C	A	Hoxd9_MA0913.1	10	0	+	0	0	.
chr20	57658043	57658044	chr20:57658044:C:A	rs1029822630	C	A	C	Hoxd9_MA0913.1	23	0	+	0	0	.
chr20	57719256	57719257	chr20:57719257:A:G	rs6025739	A	G	A	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr20	57878584	57878585	chr20:57878585:G:A	rs146203243	G	A	G	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr20	58095792	58095793	chr20:58095793:G:C	chr20:58095793:G:C	G	C	g	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr20	58097474	58097475	chr20:58097475:A:C	rs76934272	A	C	a	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr20	58133253	58133254	chr20:58133254:C:T	rs73302879	C	T	C	Hoxd9_MA0913.1	29	0	-	0	0	.
chr20	58169371	58169372	chr20:58169372:A:G	rs6026098	A	G	G	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr20	58229832	58229833	chr20:58229833:G:T	rs550222	G	T	T	Hoxd9_MA0913.1	16	0	+	0	0	.
chr20	58251611	58251612	chr20:58251612:C:T	rs1537479	C	T	C	Hoxd9_MA0913.1	17	0	+	0	0	.
chr20	58525625	58525626	chr20:58525626:T:C	rs6026327	T	C	C	Hoxd9_MA0913.1	20	0	+	0	0	.
chr20	58525626	58525627	chr20:58525627:G:A	rs6513392	G	A	G	Hoxd9_MA0913.1	21	0	+	0	0	.
chr20	58766849	58766850	chr20:58766850:A:G	rs2865713	A	G	G	Hoxd9_MA0913.1	13	0	-	0	0	.
chr20	58985721	58985722	chr20:58985722:C:T	rs41276958	C	T	C	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr20	59146094	59146095	chr20:59146095:C:T	rs986830916	C	T	C	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr20	59392850	59392851	chr20:59392851:A:G	rs1877751	A	G	G	Hoxd9_MA0913.1	18	0	+	0	0	.
chr20	59438540	59438541	chr20:59438541:T:G	rs11698543	T	G	T	Hoxd9_MA0913.1	25	0	+	0	0	.
chr20	59589250	59589251	chr20:59589251:A:C	rs1418942	A	C	A	Hoxd9_MA0913.1	29	0	-	0	0	.
chr20	59603171	59603172	chr20:59603172:C:G	rs6026992	C	G	C	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr20	59750334	59750335	chr20:59750335:G:A	rs116953202	G	A	G	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr20	59772329	59772330	chr20:59772330:T:A	rs12625299	T	A	T	Hoxd9_MA0913.1	5	1	-	7.801678332738202	7.760507910628393	GCAATAAACA
chr20	60073042	60073043	chr20:60073043:G:T	rs4812146	G	T	T	Hoxd9_MA0913.1	3	1	+	7.973723031895638	6.18700210326176	GCAGTAAAAA
chr20	60078281	60078282	chr20:60078282:A:G	rs11086694	A	G	A	Hoxd9_MA0913.1	3	1	+	9.801341972390743	7.973723031895638	GCAATAAAAA
chr20	60111886	60111887	chr20:60111887:G:A	rs6071111	G	A	g	Hoxd9_MA0913.1	17	0	-	0	0	.
chr20	60250460	60250461	chr20:60250461:T:C	rs116379794	T	C	T	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr20	60300277	60300278	chr20:60300278:A:C	rs164923	A	C	C	Hoxd9_MA0913.1	21	0	+	0	0	.
chr20	60373118	60373119	chr20:60373119:T:G	rs187517721	T	G	T	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr20	60430013	60430014	chr20:60430014:A:C	rs348840	A	C	A	Hoxd9_MA0913.1	7	1	+	8.678133135028622	5.384286383310189	GCAATTAAAC
chr20	60715228	60715229	chr20:60715229:A:T	rs1201970	A	T	T	Hoxd9_MA0913.1	7	1	+	8.323343304007485	5.029496552289054	CCAATAAAAA
chr20	60760365	60760366	chr20:60760366:T:G	rs4812204	T	G	T	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr20	61112967	61112968	chr20:61112968:G:A	rs113086115	G	A	G	Hoxd9_MA0913.1	21	0	+	0	0	.
chr20	61118286	61118287	chr20:61118287:A:G	rs751721	A	G	G	Hoxd9_MA0913.1	16	0	+	0	0	.
chr20	61288853	61288854	chr20:61288854:C:T	rs6101294	C	T	C	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr20	61355164	61355165	chr20:61355165:C:A	rs28625007	C	A	A	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr20	61399479	61399480	chr20:61399480:C:A	rs57984446	C	A	C	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr20	61441767	61441768	chr20:61441768:G:A	rs62200873	G	A	G	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr20	61541727	61541728	chr20:61541728:C:T	rs6061279	C	T	T	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr20	61560296	61560297	chr20:61560297:G:A	rs6061281	G	A	G	Hoxd9_MA0913.1	13	0	-	0	0	.
chr20	62059634	62059635	chr20:62059635:T:G	rs6121889	T	G	T	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr20	62372155	62372156	chr20:62372156:T:C	rs13037244	T	C	C	Hoxd9_MA0913.1	3	1	-	9.51635951314298	7.688740572647875	GCAATTAAAT
chr20	62387886	62387887	chr20:62387887:T:C	rs1043008	T	C	T	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr20	62557229	62557230	chr20:62557230:T:C	rs6062237	T	C	c	Hoxd9_MA0913.1	10	0	-	0	0	.
chr20	62577280	62577281	chr20:62577281:C:T	rs900561690	C	T	c	Hoxd9_MA0913.1	14	0	+	0	0	.
chr20	62577282	62577283	chr20:62577283:C:T	rs3813451	C	T	c	Hoxd9_MA0913.1	16	0	+	0	0	.
chr20	62588622	62588623	chr20:62588623:G:A	rs28423972	G	A	g	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr20	62588626	62588627	chr20:62588627:A:G	rs28489524	A	G	g	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr20	62588650	62588651	chr20:62588651:C:T	rs55650047	C	T	c	Hoxd9_MA0913.1	13	0	+	0	0	.
chr20	62841087	62841088	chr20:62841088:C:T	rs1048132	C	T	T	Hoxd9_MA0913.1	21	0	+	0	0	.
chr20	62845563	62845564	chr20:62845564:T:G	rs1183558052	T	G	T	Hoxd9_MA0913.1	5	1	+	8.568625789732518	2.388133058946461	ACAATTAAAT
chr20	63019870	63019871	chr20:63019871:G:C	rs6011532	G	C	C	Hoxd9_MA0913.1	28	0	-	0	0	.
chr20	63019906	63019907	chr20:63019907:G:T	rs61546182	G	T	T	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr20	63022326	63022327	chr20:63022327:T:C	rs6011536	T	C	C	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr20	63127714	63127715	chr20:63127715:A:C	rs2064613	A	C	A	Hoxd9_MA0913.1	13	0	-	0	0	.
chr20	63525130	63525131	chr20:63525131:T:C	rs375990	T	C	T	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr20	63639133	63639134	chr20:63639134:C:T	rs2777935	C	T	T	Hoxd9_MA0913.1	20	0	-	0	0	.
chr20	63639169	63639170	chr20:63639170:G:A	rs115202772	G	A	G	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr20	63756741	63756742	chr20:63756742:G:A	rs6011084	G	A	G	Hoxd9_MA0913.1	9	1	-	8.719303557138431	9.55752993525279	GCAATAAAAC
chr20	63893603	63893604	chr20:63893604:T:A	rs6062570	T	A	A	Hoxd9_MA0913.1	13	0	+	0	0	.
chr20	64030674	64030675	chr20:64030675:T:C	rs6062338	T	C	T	Hoxd9_MA0913.1	24	0	+	0	0	.
chr20	64163730	64163731	chr20:64163731:C:T	rs73324800	C	T	C	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr21	7259109	7259110	chr21:7259110:G:A	rs1357223467	G	A	.	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr21	7259122	7259123	chr21:7259123:G:C	rs1452013201	G	C	.	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr21	8989455	8989456	chr21:8989456:A:G	rs79279102	A	G	.	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr21	8994629	8994630	chr21:8994630:G:T	rs797015315	G	T	.	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr21	9001915	9001916	chr21:9001916:C:T	rs77477417	C	T	.	Hoxd9_MA0913.1	20	0	+	0	0	.
chr21	9009041	9009042	chr21:9009042:T:C	rs80222862	T	C	.	Hoxd9_MA0913.1	27	0	-	0	0	.
chr21	9009055	9009056	chr21:9009056:C:T	rs79015103	C	T	.	Hoxd9_MA0913.1	13	0	-	0	0	.
chr21	9021352	9021353	chr21:9021353:G:T	rs372375901	G	T	.	Hoxd9_MA0913.1	17	0	+	0	0	.
chr21	9731017	9731018	chr21:9731018:C:A	rs1364491524	C	A	.	Hoxd9_MA0913.1	17	0	-	0	0	.
chr21	9942839	9942840	chr21:9942840:A:C	rs78348618	A	C	C	Hoxd9_MA0913.1	27	0	+	0	0	.
chr21	13445060	13445061	chr21:13445061:T:A	rs3119485	T	A	.	Hoxd9_MA0913.1	14	0	+	0	0	.
chr21	14527290	14527291	chr21:14527291:G:A	rs2822748	G	A	G	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr21	14754483	14754484	chr21:14754484:C:T	rs7283943	C	T	T	Hoxd9_MA0913.1	21	0	-	0	0	.
chr21	14772330	14772331	chr21:14772331:T:C	rs13046559	T	C	C	Hoxd9_MA0913.1	29	0	-	0	0	.
chr21	14923696	14923697	chr21:14923697:A:C	rs57070884	A	C	A	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr21	14982649	14982650	chr21:14982650:C:T	rs1810404	C	T	C	Hoxd9_MA0913.1	13	0	-	0	0	.
chr21	15007933	15007934	chr21:15007934:C:T	rs80182704	C	T	T	Hoxd9_MA0913.1	15	0	+	0	0	.
chr21	15989166	15989167	chr21:15989167:C:G	rs2823533	C	G	C	Hoxd9_MA0913.1	24	0	+	0	0	.
chr21	16117778	16117779	chr21:16117779:T:A	rs58529486	T	A	T	Hoxd9_MA0913.1	1	1	+	8.531537147691377	6.459854399395143	GTCATAAAAA
chr21	16169138	16169139	chr21:16169139:G:T	chr21:16169139:G:T	G	T	G	Hoxd9_MA0913.1	11	0	+	0	0	.
chr21	16258891	16258892	chr21:16258892:G:A	rs2823705	G	A	A	Hoxd9_MA0913.1	27	0	-	0	0	.
chr21	16370009	16370010	chr21:16370010:A:G	rs2823756	A	G	G	Hoxd9_MA0913.1	3	1	+	8.568625789732518	6.741006849237415	ACAATTAAAT
chr21	16422687	16422688	chr21:16422688:T:A	rs9305765	T	A	A	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr21	16742152	16742153	chr21:16742153:C:T	rs4818280	C	T	C	Hoxd9_MA0913.1	29	0	+	0	0	.
chr21	16869754	16869755	chr21:16869755:C:A	rs450456	C	A	C	Hoxd9_MA0913.1	26	0	-	0	0	.
chr21	16976275	16976276	chr21:16976276:A:G	rs11088604	A	G	A	Hoxd9_MA0913.1	6	1	+	8.812437826870472	1.9970171590911319	ACAATTAAAA
chr21	17159388	17159389	chr21:17159389:T:C	rs12483544	T	C	T	Hoxd9_MA0913.1	23	0	-	0	0	.
chr21	17304958	17304959	chr21:17304959:T:C	rs62241465	T	C	C	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr21	17351351	17351352	chr21:17351352:A:G	rs2824282	A	G	A	Hoxd9_MA0913.1	0	1	+	8.60979621184233	9.55752993525279	ACAATAAAAT
chr21	17454276	17454277	chr21:17454277:G:A	rs2824316	G	A	A	Hoxd9_MA0913.1	27	0	+	0	0	.
chr21	17457933	17457934	chr21:17457934:C:T	rs2824317	C	T	T	Hoxd9_MA0913.1	15	0	+	0	0	.
chr21	17571152	17571153	chr21:17571153:C:G	rs2824367	C	G	G	Hoxd9_MA0913.1	1	1	+	8.082713108822833	4.990148096538121	GCGATTAAAA
chr21	17732295	17732296	chr21:17732296:T:C	rs73204439	T	C	T	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr21	17753803	17753804	chr21:17753804:T:G	rs73314011	T	G	T	Hoxd9_MA0913.1	4	1	+	7.7976343601680895	4.50550010839311	GCCATAAAAC
chr21	17781503	17781504	chr21:17781504:T:A	rs9976113	T	A	T	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr21	17781520	17781521	chr21:17781521:T:C	rs4818382	T	C	T	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr21	17784790	17784791	chr21:17784791:G:A	rs901819675	G	A	G	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr21	17784823	17784824	chr21:17784824:C:T	rs381462	C	T	C	Hoxd9_MA0913.1	23	0	+	0	0	.
chr21	18252601	18252602	chr21:18252602:G:A	rs80018888	G	A	A	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr21	18679035	18679036	chr21:18679036:C:T	rs2824988	C	T	C	Hoxd9_MA0913.1	11	0	-	0	0	.
chr21	18772667	18772668	chr21:18772668:A:G	rs2226762	A	G	A	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr21	18831923	18831924	chr21:18831924:A:C	rs2825190	A	C	A	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr21	18954407	18954408	chr21:18954408:A:G	rs457662	A	G	A	Hoxd9_MA0913.1	4	1	-	8.490366725581566	5.198232473806588	GTCATTAAAA
chr21	19119883	19119884	chr21:19119884:T:C	rs17179114	T	C	T	Hoxd9_MA0913.1	5	1	-	7.7976343601680895	1.5759712072722212	GCCATAAAAC
chr21	19198106	19198107	chr21:19198107:G:A	rs2211936	G	A	G	Hoxd9_MA0913.1	17	0	-	0	0	.
chr21	19638442	19638443	chr21:19638443:T:C	rs2154623	T	C	T	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr21	19836282	19836283	chr21:19836283:G:A	rs12172913	G	A	A	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr21	20232646	20232647	chr21:20232647:T:C	rs77166517	T	C	T	Hoxd9_MA0913.1	19	0	-	0	0	.
chr21	20412166	20412167	chr21:20412167:T:C	rs137978462	T	C	T	Hoxd9_MA0913.1	10	0	+	0	0	.
chr21	20460158	20460159	chr21:20460159:T:G	rs1735841	T	G	G	Hoxd9_MA0913.1	2	1	-	8.60979621184233	7.688127014871988	ACAATAAAAT
chr21	20688523	20688524	chr21:20688524:G:C	rs11088822	G	C	G	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr21	21407166	21407167	chr21:21407167:C:G	rs2826829	C	G	C	Hoxd9_MA0913.1	26	0	-	0	0	.
chr21	21897845	21897846	chr21:21897846:G:A	chr21:21897846:G:A	G	A	G	Hoxd9_MA0913.1	1	1	-	9.55752993525279	9.209394307523764	GCAATAAAAT
chr21	21921716	21921717	chr21:21921717:C:T	rs2827131	C	T	C	Hoxd9_MA0913.1	1	1	+	8.082713108822833	7.73457748109381	GCGATTAAAA
chr21	21921731	21921732	chr21:21921732:A:G	rs11088898	A	G	A	Hoxd9_MA0913.1	16	0	+	0	0	.
chr21	22107363	22107364	chr21:22107364:G:C	rs117761137	G	C	G	Hoxd9_MA0913.1	0	1	-	8.323343304007485	9.801341972390743	CCAATAAAAA
chr21	22247472	22247473	chr21:22247473:C:T	rs75658980	C	T	C	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr21	22654936	22654937	chr21:22654937:T:C	rs12483587	T	C	T	Hoxd9_MA0913.1	14	0	+	0	0	.
chr21	23064742	23064743	chr21:23064743:T:C	rs13047424	T	C	T	Hoxd9_MA0913.1	8	1	-	9.51635951314298	7.943390935685037	GCAATTAAAT
chr21	23539339	23539340	chr21:23539340:A:C	rs11087875	A	C	A	Hoxd9_MA0913.1	20	0	+	0	0	.
chr21	23952169	23952170	chr21:23952170:T:C	rs2828645	T	C	T	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr21	24453820	24453821	chr21:24453821:A:G	rs780150651	A	G	A	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr21	24488143	24488144	chr21:24488144:T:G	rs79546652	T	G	T	Hoxd9_MA0913.1	21	0	-	0	0	.
chr21	24492189	24492190	chr21:24492190:C:T	rs2829131	C	T	T	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr21	24492471	24492472	chr21:24492472:A:G	rs58334192	A	G	g	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr21	24577916	24577917	chr21:24577917:T:C	rs7281384	T	C	t	Hoxd9_MA0913.1	27	0	+	0	0	.
chr21	24647979	24647980	chr21:24647980:G:T	rs2829220	G	T	g	Hoxd9_MA0913.1	25	0	-	0	0	.
chr21	25512595	25512596	chr21:25512596:A:G	rs7276512	A	G	A	Hoxd9_MA0913.1	3	1	+	8.282172881897674	6.454553941402571	CCAATTAAAA
chr21	25736590	25736591	chr21:25736591:A:G	chr21:25736591:A:G	A	G	A	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr21	25869921	25869922	chr21:25869922:G:A	rs73897095	G	A	G	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr21	25881828	25881829	chr21:25881829:A:C	rs41276546	A	C	A	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr21	25986962	25986963	chr21:25986963:G:C	rs762479	G	C	C	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr21	26015656	26015657	chr21:26015657:C:A	rs2830004	C	A	C	Hoxd9_MA0913.1	12	0	+	0	0	.
chr21	26079591	26079592	chr21:26079592:T:A	rs72635015	T	A	T	Hoxd9_MA0913.1	19	0	-	0	0	.
chr21	26121229	26121230	chr21:26121230:C:T	rs10482971	C	T	T	Hoxd9_MA0913.1	17	0	-	0	0	.
chr21	26297937	26297938	chr21:26297938:A:G	rs414516	A	G	A	Hoxd9_MA0913.1	24	0	-	0	0	.
chr21	26297967	26297968	chr21:26297968:C:A	rs77758916	C	A	C	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr21	26571815	26571816	chr21:26571816:G:A	rs222978	G	A	A	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr21	26571831	26571832	chr21:26571832:G:A	rs67851275	G	A	G	Hoxd9_MA0913.1	0	1	+	7.7976343601680895	6.84990063675763	GCCATAAAAC
chr21	26795853	26795854	chr21:26795854:C:T	rs76602988	C	T	C	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr21	26871845	26871846	chr21:26871846:C:T	rs115637690	C	T	C	Hoxd9_MA0913.1	29	0	-	0	0	.
chr21	26871891	26871892	chr21:26871892:C:T	rs60329675	C	T	C	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr21	26918899	26918900	chr21:26918900:C:T	rs367662468	C	T	T	Hoxd9_MA0913.1	28	0	-	0	0	.
chr21	27059260	27059261	chr21:27059261:G:A	rs4817149	G	A	G	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr21	27077906	27077907	chr21:27077907:G:A	rs2830663	G	A	A	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr21	27077908	27077909	chr21:27077909:A:G	rs73902206	A	G	A	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr21	27094450	27094451	chr21:27094451:A:G	rs2065250	A	G	A	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr21	27105258	27105259	chr21:27105259:A:G	rs2027706	A	G	A	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr21	27190663	27190664	chr21:27190664:A:G	rs235949	A	G	a	Hoxd9_MA0913.1	28	0	-	0	0	.
chr21	27333412	27333413	chr21:27333413:T:C	rs79481520	T	C	T	Hoxd9_MA0913.1	12	0	+	0	0	.
chr21	27407280	27407281	chr21:27407281:T:C	rs2830922	T	C	T	Hoxd9_MA0913.1	14	0	-	0	0	.
chr21	27552601	27552602	chr21:27552602:C:G	rs4817179	C	G	G	Hoxd9_MA0913.1	13	0	+	0	0	.
chr21	27681191	27681192	chr21:27681192:G:C	chr21:27681192:G:C	G	C	G	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr21	27681196	27681197	chr21:27681197:A:G	rs78043156	A	G	a	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr21	27690564	27690565	chr21:27690565:T:C	rs150374063	T	C	T	Hoxd9_MA0913.1	11	0	+	0	0	.
chr21	28294264	28294265	chr21:28294265:C:A	rs190913598	C	A	C	Hoxd9_MA0913.1	22	0	-	0	0	.
chr21	28336724	28336725	chr21:28336725:G:A	rs547540635	G	A	G	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr21	28339212	28339213	chr21:28339213:G:A	rs73897693	G	A	G	Hoxd9_MA0913.1	16	0	+	0	0	.
chr21	28410169	28410170	chr21:28410170:A:G	rs7277861	A	G	A	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr21	28432966	28432967	chr21:28432967:T:C	rs2831808	T	C	T	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr21	28444284	28444285	chr21:28444285:A:G	rs73897872	A	G	A	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr21	28550277	28550278	chr21:28550278:T:C	rs7283413	T	C	T	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr21	28590054	28590055	chr21:28590055:C:T	rs1028990	C	T	T	Hoxd9_MA0913.1	29	0	+	0	0	.
chr21	28747709	28747710	chr21:28747710:T:C	rs2065256	T	C	C	Hoxd9_MA0913.1	21	0	+	0	0	.
chr21	28772326	28772327	chr21:28772327:C:T	rs11088090	C	T	T	Hoxd9_MA0913.1	16	0	-	0	0	.
chr21	29177882	29177883	chr21:29177883:T:G	rs2832239	T	G	G	Hoxd9_MA0913.1	7	1	-	8.293678209511443	4.999831457793009	GCAATTAAAG
chr21	29232767	29232768	chr21:29232768:A:G	rs4315609	A	G	G	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr21	29232795	29232796	chr21:29232796:A:G	rs138146652	A	G	A	Hoxd9_MA0913.1	9	1	+	8.879672775420401	7.4131794346509094	GCCATAAAAA
chr21	29481041	29481042	chr21:29481042:A:G	rs2832350	A	G	A	Hoxd9_MA0913.1	3	1	+	9.801341972390743	7.973723031895638	GCAATAAAAA
chr21	29541271	29541272	chr21:29541272:T:C	rs1977525	T	C	T	Hoxd9_MA0913.1	13	0	-	0	0	.
chr21	29612926	29612927	chr21:29612927:G:A	rs363423	G	A	G	Hoxd9_MA0913.1	1	1	-	9.760171550280933	9.412035922551908	GCAATTAAAA
chr21	29896252	29896253	chr21:29896253:T:A	rs462393	T	A	A	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr21	29951555	29951556	chr21:29951556:T:C	rs2832502	T	C	T	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr21	30027807	30027808	chr21:30027808:C:T	rs413413	C	T	T	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr21	30059224	30059225	chr21:30059225:G:T	rs71321317	G	T	G	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr21	30234192	30234193	chr21:30234193:T:C	rs2832668	T	C	T	Hoxd9_MA0913.1	22	0	-	0	0	.
chr21	30673033	30673034	chr21:30673034:T:C	rs992875	T	C	C	Hoxd9_MA0913.1	7	1	-	9.168223885413955	2.3290794080596116	GTAATTAAAT
chr21	30714605	30714606	chr21:30714606:C:G	rs2833019	C	G	C	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr21	30815124	30815125	chr21:30815125:T:C	rs2833104	T	C	C	Hoxd9_MA0913.1	1	1	+	9.412035922551908	9.760171550280933	GTAATTAAAA
chr21	31349548	31349549	chr21:31349549:G:A	rs76032027	G	A	G	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr21	31598164	31598165	chr21:31598165:G:A	rs75962275	G	A	G	Hoxd9_MA0913.1	28	0	+	0	0	.
chr21	32064367	32064368	chr21:32064368:T:C	rs73195459	T	C	T	Hoxd9_MA0913.1	29	0	-	0	0	.
chr21	32182674	32182675	chr21:32182675:G:A	rs9980733	G	A	G	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr21	32382995	32382996	chr21:32382996:C:T	rs7276902	C	T	T	Hoxd9_MA0913.1	16	0	+	0	0	.
chr21	32427263	32427264	chr21:32427264:C:T	rs2833817	C	T	C	Hoxd9_MA0913.1	23	0	+	0	0	.
chr21	32484954	32484955	chr21:32484955:T:C	rs138731764	T	C	T	Hoxd9_MA0913.1	5	1	-	7.973723031895638	1.7520598789997708	GCAGTAAAAA
chr21	32492703	32492704	chr21:32492704:C:G	rs8131815	C	G	N	Hoxd9_MA0913.1	22	0	-	0	0	.
chr21	32509998	32509999	chr21:32509999:G:A	rs2833860	G	A	G	Hoxd9_MA0913.1	17	0	-	0	0	.
chr21	32550122	32550123	chr21:32550123:C:T	rs77117245	C	T	C	Hoxd9_MA0913.1	29	0	-	0	0	.
chr21	32555457	32555458	chr21:32555458:A:C	rs2833889	A	C	C	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr21	32808327	32808328	chr21:32808328:T:C	rs8128188	T	C	T	Hoxd9_MA0913.1	11	0	-	0	0	.
chr21	33096424	33096425	chr21:33096425:G:A	rs4456784	G	A	A	Hoxd9_MA0913.1	0	1	+	8.678133135028622	7.73039941161816	GCAATTAAAC
chr21	33296670	33296671	chr21:33296671:G:A	rs8178562	G	A	G	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr21	33317652	33317653	chr21:33317653:A:T	rs7279547	A	T	A	Hoxd9_MA0913.1	18	0	+	0	0	.
chr21	33325602	33325603	chr21:33325603:T:C	rs1169220629	T	C	T	Hoxd9_MA0913.1	27	0	+	0	0	.
chr21	33433783	33433784	chr21:33433784:A:G	rs17882822	A	G	A	Hoxd9_MA0913.1	23	0	-	0	0	.
chr21	33448495	33448496	chr21:33448496:A:T	rs8133486	A	T	T	Hoxd9_MA0913.1	5	1	-	8.490366725581566	8.531537147691377	GTCATTAAAA
chr21	33951353	33951354	chr21:33951354:G:A	rs11701963	G	A	g	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr21	34030594	34030595	chr21:34030595:A:G	rs2834352	A	G	G	Hoxd9_MA0913.1	19	0	-	0	0	.
chr21	34030614	34030615	chr21:34030615:A:T	rs2834353	A	T	A	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr21	34129386	34129387	chr21:34129387:C:G	rs569868093	C	G	C	Hoxd9_MA0913.1	21	0	-	0	0	.
chr21	34599873	34599874	chr21:34599874:G:A	rs2284608	G	A	A	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr21	34690420	34690421	chr21:34690421:A:G	rs7279681	A	G	A	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr21	34697241	34697242	chr21:34697242:C:G	rs74499848	C	G	C	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr21	34797289	34797290	chr21:34797290:C:A	rs762068446	C	A	C	Hoxd9_MA0913.1	13	0	+	0	0	.
chr21	34878466	34878467	chr21:34878467:G:A	rs2834659	G	A	G	Hoxd9_MA0913.1	13	0	-	0	0	.
chr21	34915524	34915525	chr21:34915525:A:G	rs935956912	A	G	A	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr21	34979593	34979594	chr21:34979594:T:C	rs2834712	T	C	C	Hoxd9_MA0913.1	10	0	-	0	0	.
chr21	35149644	35149645	chr21:35149645:T:C	rs78979772	T	C	T	Hoxd9_MA0913.1	28	0	+	0	0	.
chr21	35156745	35156746	chr21:35156746:C:T	rs2409589	C	T	C	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr21	35197852	35197853	chr21:35197853:A:G	rs62216996	A	G	A	Hoxd9_MA0913.1	29	0	-	0	0	.
chr21	35202709	35202710	chr21:35202710:G:A	rs73363459	G	A	G	Hoxd9_MA0913.1	18	0	+	0	0	.
chr21	35256380	35256381	chr21:35256381:T:C	rs73365452	T	C	T	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr21	35520650	35520651	chr21:35520651:T:C	rs374148	T	C	T	Hoxd9_MA0913.1	7	1	-	8.490366725581566	1.651222248227224	GTCATTAAAA
chr21	35635666	35635667	chr21:35635667:A:C	rs116675241	A	C	A	Hoxd9_MA0913.1	23	0	+	0	0	.
chr21	35682841	35682842	chr21:35682842:G:C	rs2835083	G	C	G	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr21	35927372	35927373	chr21:35927373:G:A	rs2246860	G	A	g	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr21	36199294	36199295	chr21:36199295:A:G	rs2243723	A	G	A	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr21	36211505	36211506	chr21:36211506:C:T	rs2239568	C	T	c	Hoxd9_MA0913.1	0	1	-	8.531537147691377	7.583803424280916	GTCATAAAAA
chr21	36663798	36663799	chr21:36663799:C:T	rs66745480	C	T	C	Hoxd9_MA0913.1	27	0	-	0	0	.
chr21	37047205	37047206	chr21:37047206:T:C	rs142104571	T	C	T	Hoxd9_MA0913.1	3	1	-	9.801341972390743	7.973723031895638	GCAATAAAAA
chr21	37224596	37224597	chr21:37224597:A:G	rs79315103	A	G	A	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr21	37348721	37348722	chr21:37348722:G:A	rs151238972	G	A	G	Hoxd9_MA0913.1	20	0	-	0	0	.
chr21	37348756	37348757	chr21:37348757:T:G	rs560658793	T	G	T	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr21	37358653	37358654	chr21:37358654:G:C	chr21:37358654:G:C	G	C	G	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr21	37389779	37389780	chr21:37389780:G:A	chr21:37389780:G:A	G	A	G	Hoxd9_MA0913.1	1	1	-	7.7976343601680895	7.449498732439066	GCCATAAAAC
chr21	37419774	37419775	chr21:37419775:A:T	rs2835729	A	T	A	Hoxd9_MA0913.1	17	0	+	0	0	.
chr21	37665502	37665503	chr21:37665503:A:G	rs1709833	A	G	G	Hoxd9_MA0913.1	20	0	-	0	0	.
chr21	37771723	37771724	chr21:37771724:C:T	rs2835950	C	T	C	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr21	38213714	38213715	chr21:38213715:A:G	rs2836192	A	G	A	Hoxd9_MA0913.1	28	0	+	0	0	.
chr21	38303444	38303445	chr21:38303445:G:A	rs528202760	G	A	G	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr21	38541204	38541205	chr21:38541205:C:T	rs2836492	C	T	T	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr21	38639991	38639992	chr21:38639992:C:G	rs456457	C	G	C	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr21	38646789	38646790	chr21:38646790:T:C	rs113404028	T	C	T	Hoxd9_MA0913.1	21	0	-	0	0	.
chr21	38748005	38748006	chr21:38748006:A:G	rs2836658	A	G	G	Hoxd9_MA0913.1	13	0	-	0	0	.
chr21	38808458	38808459	chr21:38808459:T:A	rs1209953	T	A	T	Hoxd9_MA0913.1	10	0	-	0	0	.
chr21	38808473	38808474	chr21:38808474:G:A	rs548863871	G	A	G	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr21	38912775	38912776	chr21:38912776:C:T	rs1027052863	C	T	C	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr21	38922156	38922157	chr21:38922157:C:T	rs528325081	C	T	C	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr21	39043445	39043446	chr21:39043446:T:C	rs2836855	T	C	T	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr21	39184755	39184756	chr21:39184756:G:A	rs113189535	G	A	G	Hoxd9_MA0913.1	26	0	+	0	0	.
chr21	39323272	39323273	chr21:39323273:G:A	rs997146	G	A	g	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr21	39347100	39347101	chr21:39347101:A:G	rs2249651	A	G	A	Hoxd9_MA0913.1	23	0	+	0	0	.
chr21	39400557	39400558	chr21:39400558:C:T	rs2837007	C	T	T	Hoxd9_MA0913.1	12	0	+	0	0	.
chr21	39489749	39489750	chr21:39489750:A:G	rs7280971	A	G	a	Hoxd9_MA0913.1	20	0	+	0	0	.
chr21	39503481	39503482	chr21:39503482:C:T	rs8131078	C	T	C	Hoxd9_MA0913.1	17	0	+	0	0	.
chr21	39503486	39503487	chr21:39503487:A:C	rs8130969	A	C	A	Hoxd9_MA0913.1	22	0	+	0	0	.
chr21	39529244	39529245	chr21:39529245:T:C	rs117114519	T	C	C	Hoxd9_MA0913.1	27	0	-	0	0	.
chr21	39529255	39529256	chr21:39529256:C:G	rs117465668	C	G	C	Hoxd9_MA0913.1	16	0	-	0	0	.
chr21	39553580	39553581	chr21:39553581:G:A	rs11088484	G	A	G	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr21	39780195	39780196	chr21:39780196:A:C	rs4818091	A	C	A	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr21	39961478	39961479	chr21:39961479:T:C	rs994568	T	C	-	Hoxd9_MA0913.1	23	0	-	0	0	.
chr21	40018861	40018862	chr21:40018862:C:T	rs2989337	C	T	C	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr21	40103362	40103363	chr21:40103363:A:T	rs2837429	A	T	A	Hoxd9_MA0913.1	16	0	+	0	0	.
chr21	40466035	40466036	chr21:40466036:C:T	rs78664731	C	T	C	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr21	40613821	40613822	chr21:40613822:T:G	rs6517602	T	G	G	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr21	40678957	40678958	chr21:40678958:A:G	rs11088526	A	G	A	Hoxd9_MA0913.1	6	1	+	8.60979621184233	1.7943755440629887	ACAATAAAAT
chr21	40706800	40706801	chr21:40706801:C:T	rs2183578	C	T	T	Hoxd9_MA0913.1	1	1	+	8.853608248980283	8.505472621251258	ACAATAAAAA
chr21	40930901	40930902	chr21:40930902:A:C	rs2837877	A	C	C	Hoxd9_MA0913.1	12	0	-	0	0	.
chr21	41348689	41348690	chr21:41348690:G:A	rs147056375	G	A	G	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr21	41640908	41640909	chr21:41640909:G:C	rs13049373	G	C	C	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr21	41832094	41832095	chr21:41832095:C:T	rs1218113211	C	T	C	Hoxd9_MA0913.1	23	0	-	0	0	.
chr21	41880046	41880047	chr21:41880047:C:T	rs79530026	C	T	T	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr21	42011465	42011466	chr21:42011466:C:T	rs1054526	C	T	C	Hoxd9_MA0913.1	17	0	-	0	0	.
chr21	42045721	42045722	chr21:42045722:C:G	rs150797	C	G	C	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr21	42051788	42051789	chr21:42051789:G:A	rs220248	G	A	G	Hoxd9_MA0913.1	24	0	-	0	0	.
chr21	42137055	42137056	chr21:42137056:T:C	rs220176	T	C	C	Hoxd9_MA0913.1	22	0	-	0	0	.
chr21	42159233	42159234	chr21:42159234:G:T	rs9975104	G	T	G	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr21	42320577	42320578	chr21:42320578:G:A	rs480289	G	A	g	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr21	42593674	42593675	chr21:42593675:A:G	rs143710546	A	G	A	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr21	43319921	43319922	chr21:43319922:C:G	rs9976626	C	G	.	Hoxd9_MA0913.1	22	0	+	0	0	.
chr21	43326404	43326405	chr21:43326405:C:G	rs117800211	C	G	.	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr21	43352109	43352110	chr21:43352110:A:G	rs2838279	A	G	.	Hoxd9_MA0913.1	14	0	-	0	0	.
chr21	44299370	44299371	chr21:44299371:C:G	rs552522235	C	G	C	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr21	44564949	44564950	chr21:44564950:T:C	rs11911565	T	C	T	Hoxd9_MA0913.1	4	1	+	8.60979621184233	5.317661960067349	ACAATAAAAT
chr21	44753075	44753076	chr21:44753076:A:C	chr21:44753076:A:C	A	C	A	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr21	44753112	44753113	chr21:44753113:C:T	rs664353	C	T	C	Hoxd9_MA0913.1	23	0	+	0	0	.
chr21	44780354	44780355	chr21:44780355:T:C	rs4818976	T	C	T	Hoxd9_MA0913.1	22	0	-	0	0	.
chr21	44859589	44859590	chr21:44859590:T:C	rs235324	T	C	C	Hoxd9_MA0913.1	28	0	+	0	0	.
chr21	44867252	44867253	chr21:44867253:G:T	rs73238101	G	T	G	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr21	44923822	44923823	chr21:44923823:G:A	rs57894530	G	A	A	Hoxd9_MA0913.1	24	0	+	0	0	.
chr21	45126440	45126441	chr21:45126441:C:T	rs111812981	C	T	C	Hoxd9_MA0913.1	25	0	-	0	0	.
chr21	45126441	45126442	chr21:45126442:G:A	rs8129934	G	A	G	Hoxd9_MA0913.1	24	0	-	0	0	.
chr21	45126476	45126477	chr21:45126477:T:C	rs73230680	T	C	T	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr21	45168901	45168902	chr21:45168902:G:A	rs28782181	G	A	G	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr21	45233129	45233130	chr21:45233130:A:C	rs9979141	A	C	A	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr21	45282906	45282907	chr21:45282907:A:G	rs74961332	A	G	.	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr21	45709550	45709551	chr21:45709551:A:G	rs17004799	A	G	G	Hoxd9_MA0913.1	22	0	-	0	0	.
chr21	45749208	45749209	chr21:45749209:A:G	rs138116607	A	G	A	Hoxd9_MA0913.1	26	0	-	0	0	.
chr21	45832338	45832339	chr21:45832339:T:C	rs116302900	T	C	T	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr21	45952695	45952696	chr21:45952696:G:A	rs452877	G	A	A	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr21	46076951	46076952	chr21:46076952:G:A	rs58059887	G	A	G	Hoxd9_MA0913.1	23	0	+	0	0	.
chr21	46143445	46143446	chr21:46143446:C:T	rs58294703	C	T	T	Hoxd9_MA0913.1	1	1	+	8.60979621184233	8.261660584113304	ACAATAAAAT
chr21	46143448	46143449	chr21:46143449:T:C	rs59200770	T	C	T	Hoxd9_MA0913.1	4	1	+	8.60979621184233	5.317661960067349	ACAATAAAAT
chr21	46312659	46312660	chr21:46312660:A:G	rs7277438	A	G	G	Hoxd9_MA0913.1	29	0	-	0	0	.
chr21	46457001	46457002	chr21:46457002:T:C	rs8130538	T	C	C	Hoxd9_MA0913.1	21	0	+	0	0	.
chr21	46483681	46483682	chr21:46483682:A:G	rs188120446	A	G	A	Hoxd9_MA0913.1	2	1	+	8.853608248980283	7.176149807522183	ACAATAAAAA
chr21	46617335	46617336	chr21:46617336:A:T	rs9980187	A	T	A	Hoxd9_MA0913.1	9	1	-	9.168223885413955	9.412035922551908	GTAATTAAAT
chr22	10775959	10775960	chr22:10775960:G:A	rs1437908484	G	A	.	Hoxd9_MA0913.1	11	0	-	0	0	.
chr22	10778554	10778555	chr22:10778555:A:C	rs1317127587	A	C	.	Hoxd9_MA0913.1	26	0	-	0	0	.
chr22	12198842	12198843	chr22:12198843:T:C	rs11261333	T	C	.	Hoxd9_MA0913.1	17	0	-	0	0	.
chr22	15675975	15675976	chr22:15675976:C:T	rs141308346	C	T	.	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr22	15785949	15785950	chr22:15785950:A:C	rs71324597	A	C	A	Hoxd9_MA0913.1	21	0	-	0	0	.
chr22	15786271	15786272	chr22:15786272:T:C	rs1811977	T	C	T	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr22	16029394	16029395	chr22:16029395:G:A	rs1250109171	G	A	.	Hoxd9_MA0913.1	14	0	-	0	0	.
chr22	16391325	16391326	chr22:16391326:A:G	rs117844802	A	G	.	Hoxd9_MA0913.1	8	1	+	7.4131794346509094	5.840210857192967	GCCATAAAAG
chr22	16391329	16391330	chr22:16391330:G:A	rs7292129	G	A	.	Hoxd9_MA0913.1	12	0	+	0	0	.
chr22	16613618	16613619	chr22:16613619:G:A	rs111293324	G	A	.	Hoxd9_MA0913.1	28	0	-	0	0	.
chr22	16929237	16929238	chr22:16929238:C:T	rs5994093	C	T	T	Hoxd9_MA0913.1	26	0	+	0	0	.
chr22	17221887	17221888	chr22:17221888:C:T	rs737967	C	T	C	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr22	17444349	17444350	chr22:17444350:G:A	rs116169618	G	A	G	Hoxd9_MA0913.1	23	0	+	0	0	.
chr22	17477221	17477222	chr22:17477222:A:G	rs9605304	A	G	A	Hoxd9_MA0913.1	3	1	+	8.082713108822833	6.25509416832773	GCGATTAAAA
chr22	17601301	17601302	chr22:17601302:C:T	rs142511913	C	T	C	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr22	17625567	17625568	chr22:17625568:G:C	rs5747290	G	C	G	Hoxd9_MA0913.1	21	0	-	0	0	.
chr22	17637762	17637763	chr22:17637763:C:G	rs139504598	C	G	C	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr22	17673254	17673255	chr22:17673255:C:G	rs78611006	C	G	C	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr22	17689469	17689470	chr22:17689470:C:G	rs2587076	C	G	g	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr22	17717619	17717620	chr22:17717620:G:A	rs3788279	G	A	G	Hoxd9_MA0913.1	18	0	-	0	0	.
chr22	17738545	17738546	chr22:17738546:G:A	rs5992808	G	A	G	Hoxd9_MA0913.1	20	0	-	0	0	.
chr22	17871505	17871506	chr22:17871506:C:T	rs5746486	C	T	T	Hoxd9_MA0913.1	29	0	-	0	0	.
chr22	17896393	17896394	chr22:17896394:T:A	rs3213927	T	A	A	Hoxd9_MA0913.1	10	0	+	0	0	.
chr22	18077205	18077206	chr22:18077206:A:C	rs465941	A	C	A	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr22	18582865	18582866	chr22:18582866:A:T	rs77582205	A	T	a	Hoxd9_MA0913.1	15	0	-	0	0	.
chr22	19463662	19463663	chr22:19463663:C:A	rs5748218	C	A	A	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr22	19655297	19655298	chr22:19655298:G:C	rs4819516	G	C	G	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr22	19691680	19691681	chr22:19691681:T:C	rs774565154	T	C	T	Hoxd9_MA0913.1	7	1	-	8.082713108822833	1.2435686314684913	GCGATTAAAA
chr22	19692465	19692466	chr22:19692466:A:C	rs11704304	A	C	A	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr22	19806234	19806235	chr22:19806235:T:C	rs9617836	T	C	C	Hoxd9_MA0913.1	4	1	+	9.453206344661718	6.161072092886739	GTAATAAAAA
chr22	19824196	19824197	chr22:19824197:C:T	rs9606166	C	T	C	Hoxd9_MA0913.1	29	0	+	0	0	.
chr22	19873603	19873604	chr22:19873604:T:C	rs7285948	T	C	C	Hoxd9_MA0913.1	5	1	-	9.801341972390743	3.5796788194948737	GCAATAAAAA
chr22	19873633	19873634	chr22:19873634:A:G	rs737853	A	G	G	Hoxd9_MA0913.1	24	0	+	0	0	.
chr22	19873637	19873638	chr22:19873638:C:T	rs7290770	C	T	c	Hoxd9_MA0913.1	28	0	+	0	0	.
chr22	19942597	19942598	chr22:19942598:A:G	rs737865	A	G	A	Hoxd9_MA0913.1	27	0	-	0	0	.
chr22	19942635	19942636	chr22:19942636:C:T	rs737864	C	T	C	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr22	20020649	20020650	chr22:20020650:G:C	rs73387800	G	C	G	Hoxd9_MA0913.1	19	0	+	0	0	.
chr22	20611982	20611983	chr22:20611983:T:C	rs650538	T	C	.	Hoxd9_MA0913.1	27	0	-	0	0	.
chr22	20665809	20665810	chr22:20665810:C:G	rs139652345	C	G	c	Hoxd9_MA0913.1	27	0	-	0	0	.
chr22	20948636	20948637	chr22:20948637:C:T	rs2266953	C	T	T	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr22	21597450	21597451	chr22:21597451:C:A	rs5754295	C	A	A	Hoxd9_MA0913.1	19	0	-	0	0	.
chr22	21816599	21816600	chr22:21816600:G:A	rs887608599	G	A	G	Hoxd9_MA0913.1	21	0	+	0	0	.
chr22	21981241	21981242	chr22:21981242:G:A	rs5756326	G	A	G	Hoxd9_MA0913.1	28	0	-	0	0	.
chr22	22045015	22045016	chr22:22045016:G:C	rs6000695	G	C	c	Hoxd9_MA0913.1	27	0	+	0	0	.
chr22	22077243	22077244	chr22:22077244:C:T	rs7288393	C	T	c	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr22	22177185	22177186	chr22:22177186:T:C	rs5757247	T	C	.	Hoxd9_MA0913.1	4	1	+	7.062892160824505	3.770757909049527	GCCATAAAGT
chr22	22240967	22240968	chr22:22240968:T:C	rs77043064	T	C	.	Hoxd9_MA0913.1	12	0	+	0	0	.
chr22	22430402	22430403	chr22:22430403:C:T	rs73878448	C	T	c	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr22	22574839	22574840	chr22:22574840:T:C	rs715593	T	C	t	Hoxd9_MA0913.1	25	0	-	0	0	.
chr22	22692747	22692748	chr22:22692748:T:C	rs3814997	T	C	.	Hoxd9_MA0913.1	26	0	-	0	0	.
chr22	22717779	22717780	chr22:22717780:G:T	rs6003241	G	T	.	Hoxd9_MA0913.1	15	0	+	0	0	.
chr22	22765878	22765879	chr22:22765879:T:C	rs28713677	T	C	.	Hoxd9_MA0913.1	11	0	-	0	0	.
chr22	22879506	22879507	chr22:22879507:T:C	rs373535	T	C	.	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr22	22926952	22926953	chr22:22926953:G:C	rs5759536	G	C	.	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr22	23294353	23294354	chr22:23294354:G:A	rs2267025	G	A	g	Hoxd9_MA0913.1	0	1	+	7.4131794346509094	6.4654457112404495	GCCATAAAAG
chr22	23556657	23556658	chr22:23556658:G:A	rs73157017	G	A	g	Hoxd9_MA0913.1	18	0	+	0	0	.
chr22	23656286	23656287	chr22:23656287:T:G	rs715037	T	G	g	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr22	23656287	23656288	chr22:23656288:A:G	rs715036	A	G	g	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr22	23678658	23678659	chr22:23678659:A:G	rs5759958	A	G	.	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr22	23680787	23680788	chr22:23680788:A:T	rs2330578	A	T	.	Hoxd9_MA0913.1	1	1	-	8.531537147691377	6.459854399395143	GTCATAAAAA
chr22	23797292	23797293	chr22:23797293:T:C	rs5760024	T	C	-	Hoxd9_MA0913.1	20	0	-	0	0	.
chr22	24006231	24006232	chr22:24006232:G:C	rs574767785	G	C	G	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr22	24037984	24037985	chr22:24037985:T:C	rs987445493	T	C	T	Hoxd9_MA0913.1	18	0	-	0	0	.
chr22	24087163	24087164	chr22:24087164:G:A	rs78365374	G	A	G	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr22	24392728	24392729	chr22:24392729:A:C	rs79612614	A	C	A	Hoxd9_MA0913.1	5	1	-	7.021721738714695	0.8412290079286375	GCCATTAAGT
chr22	24434403	24434404	chr22:24434404:T:C	rs140915103	T	C	T	Hoxd9_MA0913.1	3	1	-	7.931939052009941	6.104320111514838	ACCATAAAAA
chr22	24482835	24482836	chr22:24482836:T:C	rs5760446	T	C	t	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr22	24683987	24683988	chr22:24683988:C:T	rs144954039	C	T	C	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr22	24684988	24684989	chr22:24684989:T:G	rs2330908	T	G	T	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr22	24765527	24765528	chr22:24765528:T:A	rs9624589	T	A	T	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr22	24825440	24825441	chr22:24825441:A:G	rs7292826	A	G	A	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr22	24845133	24845134	chr22:24845134:A:G	rs140360762	A	G	A	Hoxd9_MA0913.1	2	1	+	8.812437826870472	7.1349793854123735	ACAATTAAAA
chr22	24894885	24894886	chr22:24894886:A:T	rs5760711	A	T	A	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr22	24894889	24894890	chr22:24894890:T:G	rs1415197871	T	G	t	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr22	24977778	24977779	chr22:24977779:T:C	rs117116327	T	C	T	Hoxd9_MA0913.1	7	1	-	8.32301137036169	1.4838668930073484	GCAATAAATA
chr22	24994444	24994445	chr22:24994445:C:T	rs117352788	C	T	C	Hoxd9_MA0913.1	14	0	+	0	0	.
chr22	25007797	25007798	chr22:25007798:G:T	rs9612827	G	T	G	Hoxd9_MA0913.1	28	0	+	0	0	.
chr22	25030773	25030774	chr22:25030774:T:C	rs76192804	T	C	T	Hoxd9_MA0913.1	27	0	-	0	0	.
chr22	25265757	25265758	chr22:25265758:G:A	rs9612921	G	A	g	Hoxd9_MA0913.1	26	0	-	0	0	.
chr22	25646166	25646167	chr22:25646167:T:C	rs77968350	T	C	C	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr22	25738919	25738920	chr22:25738920:A:G	rs16980637	A	G	A	Hoxd9_MA0913.1	0	1	+	7.890768629900132	8.838502353310592	ACCATTAAAA
chr22	25797856	25797857	chr22:25797857:C:T	rs2877299	C	T	C	Hoxd9_MA0913.1	16	0	+	0	0	.
chr22	25807153	25807154	chr22:25807154:C:T	rs56070130	C	T	C	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr22	25909020	25909021	chr22:25909021:A:G	rs5761308	A	G	A	Hoxd9_MA0913.1	28	0	-	0	0	.
chr22	26067057	26067058	chr22:26067058:G:A	rs5761367	G	A	G	Hoxd9_MA0913.1	29	0	+	0	0	.
chr22	26133582	26133583	chr22:26133583:C:G	rs147673317	C	G	C	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr22	26237390	26237391	chr22:26237391:T:A	rs1028494	T	A	A	Hoxd9_MA0913.1	19	0	+	0	0	.
chr22	26268086	26268087	chr22:26268087:A:C	rs137179	A	C	C	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr22	26398658	26398659	chr22:26398659:C:A	rs4820681	C	A	C	Hoxd9_MA0913.1	15	0	+	0	0	.
chr22	26440813	26440814	chr22:26440814:T:C	rs6519650	T	C	C	Hoxd9_MA0913.1	9	1	-	8.082713108822833	6.616219768053342	GCGATTAAAA
chr22	26462646	26462647	chr22:26462647:T:C	rs113243198	T	C	T	Hoxd9_MA0913.1	3	1	-	7.984561357794846	6.156942417299742	GCAATAAAGT
chr22	26644029	26644030	chr22:26644030:G:A	rs2017127	G	A	G	Hoxd9_MA0913.1	11	0	-	0	0	.
chr22	26656925	26656926	chr22:26656926:A:T	rs2157598	A	T	A	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr22	26769874	26769875	chr22:26769875:A:T	rs73167403	A	T	A	Hoxd9_MA0913.1	25	0	-	0	0	.
chr22	26838326	26838327	chr22:26838327:T:C	rs17323675	T	C	T	Hoxd9_MA0913.1	27	0	-	0	0	.
chr22	27029826	27029827	chr22:27029827:T:C	rs134933	T	C	t	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr22	27150809	27150810	chr22:27150810:C:T	rs5997181	C	T	C	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr22	27150814	27150815	chr22:27150815:T:G	rs5997182	T	G	G	Hoxd9_MA0913.1	4	1	+	7.360503684927334	4.068369433152354	CCCATTAAAA
chr22	27225033	27225034	chr22:27225034:T:C	rs75860721	T	C	T	Hoxd9_MA0913.1	22	0	-	0	0	.
chr22	27228916	27228917	chr22:27228917:A:T	rs62223976	A	T	A	Hoxd9_MA0913.1	17	0	+	0	0	.
chr22	27228927	27228928	chr22:27228928:C:T	rs78977556	C	T	C	Hoxd9_MA0913.1	28	0	+	0	0	.
chr22	27228928	27228929	chr22:27228929:G:A	rs138887520	G	A	G	Hoxd9_MA0913.1	29	0	+	0	0	.
chr22	27294016	27294017	chr22:27294017:G:A	rs728804	G	A	G	Hoxd9_MA0913.1	1	1	-	8.323343304007485	7.97520767627846	CCAATAAAAA
chr22	27345492	27345493	chr22:27345493:T:G	rs5752522	T	G	G	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr22	27370796	27370797	chr22:27370797:G:A	rs9613438	G	A	G	Hoxd9_MA0913.1	9	1	-	8.371167929409406	9.209394307523764	GTAATAAAAC
chr22	27437018	27437019	chr22:27437019:C:A	rs529557687	C	A	C	Hoxd9_MA0913.1	21	0	-	0	0	.
chr22	27639323	27639324	chr22:27639324:T:G	rs115928088	T	G	G	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr22	27709852	27709853	chr22:27709853:A:G	rs11090507	A	G	G	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr22	27719509	27719510	chr22:27719510:C:T	rs80220843	C	T	C	Hoxd9_MA0913.1	13	0	-	0	0	.
chr22	28272814	28272815	chr22:28272815:G:A	rs5762543	G	A	G	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr22	28499005	28499006	chr22:28499006:T:G	rs695442	T	G	T	Hoxd9_MA0913.1	28	0	-	0	0	.
chr22	28712067	28712068	chr22:28712068:A:C	rs766631976	A	C	A	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr22	28712567	28712568	chr22:28712568:A:T	rs9620817	A	T	A	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr22	28857375	28857376	chr22:28857376:T:C	rs5762864	T	C	C	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr22	28906917	28906918	chr22:28906918:A:G	rs132536	A	G	A	Hoxd9_MA0913.1	17	0	-	0	0	.
chr22	28986842	28986843	chr22:28986843:A:G	rs12627758	A	G	A	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr22	29014243	29014244	chr22:29014244:A:C	rs4823003	A	C	C	Hoxd9_MA0913.1	4	1	-	8.719303557138431	5.427169305363451	GCAATAAAAC
chr22	29022174	29022175	chr22:29022175:A:T	rs874917	A	T	T	Hoxd9_MA0913.1	24	0	-	0	0	.
chr22	29022217	29022218	chr22:29022218:G:A	rs5997429	G	A	G	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr22	29084753	29084754	chr22:29084754:A:G	rs134630	A	G	G	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr22	29087884	29087885	chr22:29087885:G:T	rs2049938	G	T	G	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr22	29153531	29153532	chr22:29153532:T:A	rs4035128	T	A	T	Hoxd9_MA0913.1	6	1	-	8.464302199141448	6.040982251607463	ATAATTAAAA
chr22	29171397	29171398	chr22:29171398:G:A	rs6006042	G	A	a	Hoxd9_MA0913.1	15	0	+	0	0	.
chr22	29276127	29276128	chr22:29276128:T:C	rs17454495	T	C	T	Hoxd9_MA0913.1	22	0	-	0	0	.
chr22	29276303	29276304	chr22:29276304:A:G	rs9613855	A	G	A	Hoxd9_MA0913.1	26	0	-	0	0	.
chr22	29416767	29416768	chr22:29416768:C:T	rs9613901	C	T	C	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr22	29433343	29433344	chr22:29433344:G:C	rs13056528	G	C	g	Hoxd9_MA0913.1	22	0	+	0	0	.
chr22	29648931	29648932	chr22:29648932:A:C	chr22:29648932:A:C	A	C	A	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr22	29795931	29795932	chr22:29795932:A:G	rs74769023	A	G	a	Hoxd9_MA0913.1	11	0	+	0	0	.
chr22	29859428	29859429	chr22:29859429:G:A	rs12172419	G	A	G	Hoxd9_MA0913.1	0	1	+	8.123883530932645	7.176149807522183	GCGATAAAAA
chr22	29894643	29894644	chr22:29894644:A:G	rs5763581	A	G	A	Hoxd9_MA0913.1	4	1	-	8.505472621251258	5.213338369476279	ATAATAAAAA
chr22	29948181	29948182	chr22:29948182:T:C	rs12166755	T	C	T	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr22	30210996	30210997	chr22:30210997:C:T	rs9614164	C	T	C	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr22	30782588	30782589	chr22:30782589:T:C	rs136303	T	C	C	Hoxd9_MA0913.1	28	0	-	0	0	.
chr22	30817109	30817110	chr22:30817110:C:T	rs136232	C	T	T	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr22	30831913	30831914	chr22:30831914:T:C	rs5753338	T	C	C	Hoxd9_MA0913.1	17	0	-	0	0	.
chr22	30831944	30831945	chr22:30831945:T:C	rs5753339	T	C	T	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr22	30948211	30948212	chr22:30948212:T:C	rs182253807	T	C	T	Hoxd9_MA0913.1	5	1	+	7.265533775852649	3.87190242659309	GCCATTAAGA
chr22	31135163	31135164	chr22:31135164:C:T	rs740231	C	T	C	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr22	31220577	31220578	chr22:31220578:C:T	rs1123705	C	T	C	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr22	31244770	31244771	chr22:31244771:T:A	rs944272324	T	A	T	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr22	31398923	31398924	chr22:31398924:T:G	chr22:31398924:T:G	T	G	T	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr22	31495641	31495642	chr22:31495642:A:G	rs5753657	A	G	A	Hoxd9_MA0913.1	28	0	-	0	0	.
chr22	31497110	31497111	chr22:31497111:G:A	rs185093602	G	A	G	Hoxd9_MA0913.1	27	0	-	0	0	.
chr22	31497141	31497142	chr22:31497142:C:T	rs78159348	C	T	C	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr22	31497228	31497229	chr22:31497229:G:C	rs561248677	G	C	G	Hoxd9_MA0913.1	9	1	-	7.146334979680488	6.761880054163308	GCAATAAAGC
chr22	31535679	31535680	chr22:31535680:G:C	rs11089515	G	C	G	Hoxd9_MA0913.1	14	0	-	0	0	.
chr22	31618509	31618510	chr22:31618510:T:A	rs187527449	T	A	T	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr22	31659456	31659457	chr22:31659457:T:C	rs16989374	T	C	T	Hoxd9_MA0913.1	26	0	+	0	0	.
chr22	31681134	31681135	chr22:31681135:C:G	rs529748647	C	G	C	Hoxd9_MA0913.1	28	0	+	0	0	.
chr22	31867608	31867609	chr22:31867609:A:G	rs76342410	A	G	A	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr22	32504539	32504540	chr22:32504540:T:A	rs9606973	T	A	-	Hoxd9_MA0913.1	5	1	-	8.123883530932645	8.082713108822833	GCGATAAAAA
chr22	32589029	32589030	chr22:32589030:T:C	rs78360543	T	C	T	Hoxd9_MA0913.1	4	1	+	9.412035922551908	6.119901670776928	GTAATTAAAA
chr22	32662615	32662616	chr22:32662616:G:A	rs5749481	G	A	A	Hoxd9_MA0913.1	0	1	+	9.453206344661718	8.505472621251258	GTAATAAAAA
chr22	32684766	32684767	chr22:32684767:T:C	rs1159220	T	C	T	Hoxd9_MA0913.1	14	0	+	0	0	.
chr22	32708116	32708117	chr22:32708117:C:T	rs5754224	C	T	T	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr22	32725343	32725344	chr22:32725344:A:T	rs12484015	A	T	A	Hoxd9_MA0913.1	8	1	+	7.7976343601680895	6.319303758139038	GCCATAAAAC
chr22	32727839	32727840	chr22:32727840:A:G	rs5994613	A	G	G	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr22	32789099	32789100	chr22:32789100:A:C	rs80263051	A	C	A	Hoxd9_MA0913.1	29	0	-	0	0	.
chr22	32949528	32949529	chr22:32949529:C:A	rs144905001	C	A	C	Hoxd9_MA0913.1	29	0	+	0	0	.
chr22	33033879	33033880	chr22:33033880:C:G	rs73162089	C	G	C	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr22	33035750	33035751	chr22:33035751:C:T	rs133976	C	T	T	Hoxd9_MA0913.1	12	0	-	0	0	.
chr22	33131375	33131376	chr22:33131376:C:A	rs137342	C	A	C	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr22	33180718	33180719	chr22:33180719:A:G	rs137365	A	G	G	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr22	33272050	33272051	chr22:33272051:C:T	rs56757768	C	T	c	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr22	33272062	33272063	chr22:33272063:T:C	rs60726104	T	C	T	Hoxd9_MA0913.1	10	0	+	0	0	.
chr22	33462317	33462318	chr22:33462318:G:A	rs5754565	G	A	G	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr22	33553200	33553201	chr22:33553201:T:C	rs2283916	T	C	T	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr22	33577621	33577622	chr22:33577622:A:C	rs142296623	A	C	A	Hoxd9_MA0913.1	17	0	+	0	0	.
chr22	33605820	33605821	chr22:33605821:C:T	rs139492170	C	T	C	Hoxd9_MA0913.1	17	0	+	0	0	.
chr22	33757791	33757792	chr22:33757792:T:C	rs481698	T	C	T	Hoxd9_MA0913.1	24	0	-	0	0	.
chr22	33757794	33757795	chr22:33757795:C:A	rs143618248	C	A	C	Hoxd9_MA0913.1	21	0	-	0	0	.
chr22	33757800	33757801	chr22:33757801:T:G	rs715482	T	G	T	Hoxd9_MA0913.1	15	0	-	0	0	.
chr22	33880106	33880107	chr22:33880107:A:G	rs11703305	A	G	A	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr22	34002093	34002094	chr22:34002094:C:T	rs5754793	C	T	C	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr22	34490987	34490988	chr22:34490988:C:A	rs564787308	C	A	C	Hoxd9_MA0913.1	13	0	+	0	0	.
chr22	34490996	34490997	chr22:34490997:C:T	rs130697	C	T	T	Hoxd9_MA0913.1	22	0	+	0	0	.
chr22	34493523	34493524	chr22:34493524:G:A	rs130700	G	A	G	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr22	34709936	34709937	chr22:34709937:A:G	rs5749938	A	G	G	Hoxd9_MA0913.1	27	0	+	0	0	.
chr22	34759964	34759965	chr22:34759965:T:G	rs79007422	T	G	T	Hoxd9_MA0913.1	18	0	-	0	0	.
chr22	34784201	34784202	chr22:34784202:C:T	rs2413267	C	T	C	Hoxd9_MA0913.1	22	0	+	0	0	.
chr22	34804959	34804960	chr22:34804960:C:A	rs73164180	C	A	C	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr22	34806377	34806378	chr22:34806378:G:T	rs1028345	G	T	G	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr22	34882535	34882536	chr22:34882536:G:A	rs9622056	G	A	A	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr22	35017981	35017982	chr22:35017982:C:T	rs111638444	C	T	C	Hoxd9_MA0913.1	27	0	-	0	0	.
chr22	35018026	35018027	chr22:35018027:T:G	rs5750033	T	G	G	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr22	35120562	35120563	chr22:35120563:T:C	rs5750060	T	C	c	Hoxd9_MA0913.1	22	0	-	0	0	.
chr22	35172678	35172679	chr22:35172679:C:T	rs7291553	C	T	C	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr22	35452346	35452347	chr22:35452347:C:T	rs28486368	C	T	T	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr22	35486731	35486732	chr22:35486732:C:T	rs28707161	C	T	C	Hoxd9_MA0913.1	9	1	+	8.329997507299597	9.168223885413955	GTAATTAAAC
chr22	35507687	35507688	chr22:35507688:T:C	rs4821404	T	C	C	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr22	35910335	35910336	chr22:35910336:C:T	rs145516367	C	T	C	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr22	35938498	35938499	chr22:35938499:G:A	rs9622308	G	A	G	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr22	36220234	36220235	chr22:36220235:C:T	rs4821468	C	T	T	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr22	36220270	36220271	chr22:36220271:G:T	rs7284549	G	T	G	Hoxd9_MA0913.1	24	0	+	0	0	.
chr22	36332646	36332647	chr22:36332647:A:G	rs713659	A	G	G	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr22	36357757	36357758	chr22:36357758:C:T	rs117283436	C	T	C	Hoxd9_MA0913.1	13	0	+	0	0	.
chr22	36363589	36363590	chr22:36363590:T:C	rs143005031	T	C	T	Hoxd9_MA0913.1	19	0	-	0	0	.
chr22	36371023	36371024	chr22:36371024:C:T	rs118095204	C	T	C	Hoxd9_MA0913.1	9	1	+	8.678133135028622	9.51635951314298	GCAATTAAAC
chr22	36385073	36385074	chr22:36385074:G:A	rs117227385	G	A	G	Hoxd9_MA0913.1	13	0	-	0	0	.
chr22	36385086	36385087	chr22:36385087:C:A	rs62228871	C	A	A	Hoxd9_MA0913.1	0	1	-	8.329997507299597	5.292854811346727	GTAATTAAAC
chr22	36405480	36405481	chr22:36405481:G:A	chr22:36405481:G:A	G	A	G	Hoxd9_MA0913.1	1	1	-	7.7715698337279715	7.423434205998946	ACAATAAAAC
chr22	36715515	36715516	chr22:36715516:C:G	rs5750292	C	G	G	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr22	36977972	36977973	chr22:36977973:T:C	rs76715152	T	C	T	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr22	36985847	36985848	chr22:36985848:T:G	rs1157558	T	G	G	Hoxd9_MA0913.1	29	0	-	0	0	.
chr22	37171952	37171953	chr22:37171953:C:T	rs111785712	C	T	C	Hoxd9_MA0913.1	22	0	-	0	0	.
chr22	37194261	37194262	chr22:37194262:C:G	rs229537	C	G	C	Hoxd9_MA0913.1	26	0	-	0	0	.
chr22	37281677	37281678	chr22:37281678:G:A	rs727047	G	A	G	Hoxd9_MA0913.1	15	0	+	0	0	.
chr22	37284935	37284936	chr22:37284936:G:A	rs555716761	G	A	G	Hoxd9_MA0913.1	23	0	+	0	0	.
chr22	37512302	37512303	chr22:37512303:T:G	chr22:37512303:T:G	T	G	T	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr22	37808298	37808299	chr22:37808299:G:T	rs906458067	G	T	g	Hoxd9_MA0913.1	1	1	-	7.062892160824505	4.643073784799247	GCCATAAAGT
chr22	37826675	37826676	chr22:37826676:C:G	rs112558299	C	G	C	Hoxd9_MA0913.1	28	0	-	0	0	.
chr22	37848208	37848209	chr22:37848209:C:T	rs4821721	C	T	T	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr22	37999876	37999877	chr22:37999877:G:A	rs115953595	G	A	G	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr22	38136280	38136281	chr22:38136281:T:C	rs8135937	T	C	T	Hoxd9_MA0913.1	18	0	+	0	0	.
chr22	38181015	38181016	chr22:38181016:G:A	rs375441646	G	A	G	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr22	38181034	38181035	chr22:38181035:G:A	rs973543662	G	A	G	Hoxd9_MA0913.1	14	0	+	0	0	.
chr22	38181934	38181935	chr22:38181935:A:G	chr22:38181935:A:G	A	G	A	Hoxd9_MA0913.1	28	0	-	0	0	.
chr22	38181978	38181979	chr22:38181979:C:G	rs138834877	C	G	C	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr22	38257682	38257683	chr22:38257683:T:C	rs9610927	T	C	T	Hoxd9_MA0913.1	12	0	-	0	0	.
chr22	38304757	38304758	chr22:38304758:G:A	rs73884679	G	A	G	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr22	38395826	38395827	chr22:38395827:C:T	rs196109	C	T	c	Hoxd9_MA0913.1	26	0	+	0	0	.
chr22	38415276	38415277	chr22:38415277:C:T	rs885867	C	T	C	Hoxd9_MA0913.1	16	0	-	0	0	.
chr22	38540809	38540810	chr22:38540810:T:C	rs540875316	T	C	T	Hoxd9_MA0913.1	18	0	+	0	0	.
chr22	38696997	38696998	chr22:38696998:T:C	rs16999252	T	C	T	Hoxd9_MA0913.1	25	0	-	0	0	.
chr22	38927158	38927159	chr22:38927159:A:G	rs73159372	A	G	-	Hoxd9_MA0913.1	6	1	+	9.412035922551908	2.5966152547725674	GTAATTAAAA
chr22	39155522	39155523	chr22:39155523:G:A	rs6001456	G	A	G	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr22	39800945	39800946	chr22:39800946:A:G	rs11703943	A	G	A	Hoxd9_MA0913.1	21	0	+	0	0	.
chr22	39908576	39908577	chr22:39908577:C:T	rs137964	C	T	C	Hoxd9_MA0913.1	0	1	-	9.453206344661718	8.505472621251258	GTAATAAAAA
chr22	39929156	39929157	chr22:39929157:C:T	rs137980	C	T	C	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr22	39954721	39954722	chr22:39954722:G:A	rs6001709	G	A	G	Hoxd9_MA0913.1	27	0	-	0	0	.
chr22	40385059	40385060	chr22:40385060:A:G	rs77662200	A	G	A	Hoxd9_MA0913.1	22	0	+	0	0	.
chr22	40387775	40387776	chr22:40387776:G:C	rs2294348	G	C	C	Hoxd9_MA0913.1	24	0	+	0	0	.
chr22	40568007	40568008	chr22:40568008:G:C	rs9619878	G	C	G	Hoxd9_MA0913.1	12	0	+	0	0	.
chr22	40603216	40603217	chr22:40603217:G:A	rs80270068	G	A	G	Hoxd9_MA0913.1	16	0	-	0	0	.
chr22	40748469	40748470	chr22:40748470:T:C	rs9611410	T	C	C	Hoxd9_MA0913.1	19	0	+	0	0	.
chr22	40864132	40864133	chr22:40864133:G:C	rs146070366	G	C	G	Hoxd9_MA0913.1	14	0	-	0	0	.
chr22	40952713	40952714	chr22:40952714:T:A	rs113744478	T	A	T	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr22	41030134	41030135	chr22:41030135:G:A	rs9611465	G	A	G	Hoxd9_MA0913.1	2	1	-	8.594690316172638	3.066015481292197	GCCATTAAAT
chr22	41286700	41286701	chr22:41286701:G:A	rs185376211	G	A	G	Hoxd9_MA0913.1	14	0	+	0	0	.
chr22	41413452	41413453	chr22:41413453:A:G	chr22:41413453:A:G	A	G	A	Hoxd9_MA0913.1	11	0	+	0	0	.
chr22	41620124	41620125	chr22:41620125:A:G	rs28384698	A	G	A	Hoxd9_MA0913.1	11	0	+	0	0	.
chr22	41672262	41672263	chr22:41672263:G:A	rs142676005	G	A	G	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr22	42069255	42069256	chr22:42069256:T:C	rs133370	T	C	T	Hoxd9_MA0913.1	19	0	+	0	0	.
chr22	42076232	42076233	chr22:42076233:A:C	rs2413667	A	C	A	Hoxd9_MA0913.1	17	0	+	0	0	.
chr22	42221404	42221405	chr22:42221405:T:C	rs5751244	T	C	C	Hoxd9_MA0913.1	16	0	+	0	0	.
chr22	42340810	42340811	chr22:42340811:T:G	rs901990130	T	G	T	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr22	42413260	42413261	chr22:42413261:T:C	rs59697286	T	C	C	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr22	42665607	42665608	chr22:42665608:T:C	rs563116041	T	C	t	Hoxd9_MA0913.1	29	0	-	0	0	.
chr22	42889384	42889385	chr22:42889385:C:T	rs5751400	C	T	C	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr22	42929345	42929346	chr22:42929346:C:T	rs2284093	C	T	C	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr22	42973032	42973033	chr22:42973033:T:G	rs1044012611	T	G	T	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr22	42990709	42990710	chr22:42990710:G:A	rs3819678	G	A	G	Hoxd9_MA0913.1	15	0	-	0	0	.
chr22	42997978	42997979	chr22:42997979:A:T	rs5751410	A	T	A	Hoxd9_MA0913.1	5	1	+	7.7299109947576845	7.688740572647875	GCAGTAAAAT
chr22	43025411	43025412	chr22:43025412:T:C	rs139129071	T	C	T	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr22	43101891	43101892	chr22:43101892:A:G	rs135014	A	G	A	Hoxd9_MA0913.1	25	0	-	0	0	.
chr22	43119332	43119333	chr22:43119333:T:G	rs4988389	T	G	G	Hoxd9_MA0913.1	26	0	+	0	0	.
chr22	43239311	43239312	chr22:43239312:A:G	rs6003120	A	G	A	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr22	43331387	43331388	chr22:43331388:A:G	rs74722324	A	G	A	Hoxd9_MA0913.1	14	0	-	0	0	.
chr22	43481388	43481389	chr22:43481389:G:A	rs11703733	G	A	G	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr22	43554525	43554526	chr22:43554526:G:A	rs909955	G	A	g	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr22	43666458	43666459	chr22:43666459:A:G	rs76851977	A	G	A	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr22	43829965	43829966	chr22:43829966:T:A	rs138063	T	A	A	Hoxd9_MA0913.1	3	1	-	8.2283733949328	4.614033525803817	GCAATAAAGA
chr22	43829977	43829978	chr22:43829978:G:A	rs2285157	G	A	G	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr22	43946294	43946295	chr22:43946295:C:G	rs76510336	C	G	C	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr22	44024978	44024979	chr22:44024979:A:T	rs9941915	A	T	a	Hoxd9_MA0913.1	13	0	-	0	0	.
chr22	44049846	44049847	chr22:44049847:C:A	rs62226389	C	A	C	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr22	44049852	44049853	chr22:44049853:G:A	rs75582664	G	A	G	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr22	44051165	44051166	chr22:44051166:A:G	rs6006632	A	G	G	Hoxd9_MA0913.1	17	0	+	0	0	.
chr22	44096778	44096779	chr22:44096779:T:C	rs11703469	T	C	T	Hoxd9_MA0913.1	7	1	-	8.719303557138431	1.8801590797840877	GCAATAAAAC
chr22	44096794	44096795	chr22:44096795:A:G	rs2299849	A	G	G	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr22	44130554	44130555	chr22:44130555:G:A	rs117178074	G	A	G	Hoxd9_MA0913.1	14	0	+	0	0	.
chr22	44199111	44199112	chr22:44199112:T:A	rs76846378	T	A	T	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr22	44233598	44233599	chr22:44233599:T:G	rs9614383	T	G	T	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr22	44396069	44396070	chr22:44396070:G:A	rs75817635	G	A	G	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr22	44585082	44585083	chr22:44585083:A:G	rs138616	A	G	G	Hoxd9_MA0913.1	7	1	+	8.2283733949328	1.3892289175784578	GCAATAAAGA
chr22	44621183	44621184	chr22:44621184:G:A	rs958708325	G	A	G	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr22	44647555	44647556	chr22:44647556:G:A	rs136887	G	A	G	Hoxd9_MA0913.1	12	0	-	0	0	.
chr22	44737342	44737343	chr22:44737343:C:T	rs73889722	C	T	C	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr22	44737357	44737358	chr22:44737358:A:G	rs3329	A	G	G	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr22	44793582	44793583	chr22:44793583:T:C	rs5012765	T	C	T	Hoxd9_MA0913.1	20	0	-	0	0	.
chr22	44883439	44883440	chr22:44883440:A:G	rs3747224	A	G	A	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr22	44929093	44929094	chr22:44929094:G:A	rs136686	G	A	G	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr22	45006244	45006245	chr22:45006245:A:T	rs6007409	A	T	A	Hoxd9_MA0913.1	6	1	+	7.932552609785828	5.5092326622518435	GCAGTTAAAA
chr22	45124530	45124531	chr22:45124531:C:T	rs183805660	C	T	C	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr22	45158315	45158316	chr22:45158316:G:A	rs132834	G	A	A	Hoxd9_MA0913.1	1	1	-	7.000674693570522	6.652539065841498	GCGATTAAAC
chr22	45170205	45170206	chr22:45170206:C:T	rs9626290	C	T	C	Hoxd9_MA0913.1	16	0	+	0	0	.
chr22	45236646	45236647	chr22:45236647:C:T	rs5766582	C	T	C	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr22	45389681	45389682	chr22:45389682:T:C	rs116787468	T	C	T	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr22	45485433	45485434	chr22:45485434:G:A	rs5765401	G	A	G	Hoxd9_MA0913.1	20	0	+	0	0	.
chr22	45679248	45679249	chr22:45679249:G:A	rs73886489	G	A	G	Hoxd9_MA0913.1	24	0	-	0	0	.
chr22	45711197	45711198	chr22:45711198:G:C	rs138153	G	C	C	Hoxd9_MA0913.1	17	0	+	0	0	.
chr22	45773329	45773330	chr22:45773330:C:T	rs74792729	C	T	C	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr22	45778176	45778177	chr22:45778177:C:T	rs135991	C	T	C	Hoxd9_MA0913.1	26	0	+	0	0	.
chr22	45842535	45842536	chr22:45842536:C:G	rs187046181	C	G	C	Hoxd9_MA0913.1	29	0	+	0	0	.
chr22	46056847	46056848	chr22:46056848:T:C	rs140230319	T	C	T	Hoxd9_MA0913.1	24	0	+	0	0	.
chr22	46073436	46073437	chr22:46073437:G:C	rs111376467	G	C	G	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr22	46241078	46241079	chr22:46241079:G:A	rs41378347	G	A	G	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr22	46460908	46460909	chr22:46460909:T:A	rs5768782	T	A	T	Hoxd9_MA0913.1	24	0	-	0	0	.
chr22	46460948	46460949	chr22:46460949:G:A	rs11912754	G	A	G	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr22	46683645	46683646	chr22:46683646:A:G	rs12160472	A	G	A	Hoxd9_MA0913.1	11	0	+	0	0	.
chr22	46858332	46858333	chr22:46858333:T:A	rs147349817	T	A	T	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr22	46913454	46913455	chr22:46913455:T:C	rs16995971	T	C	T	Hoxd9_MA0913.1	8	1	-	7.7299109947576845	6.156942417299742	GCAGTAAAAT
chr22	46929623	46929624	chr22:46929624:C:T	rs7291004	C	T	C	Hoxd9_MA0913.1	17	0	+	0	0	.
chr22	46955001	46955002	chr22:46955002:G:A	rs73186520	G	A	G	Hoxd9_MA0913.1	24	0	+	0	0	.
chr22	46972771	46972772	chr22:46972772:G:T	rs136109	G	T	G	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr22	46992712	46992713	chr22:46992713:G:A	rs136141	G	A	A	Hoxd9_MA0913.1	25	0	-	0	0	.
chr22	47027810	47027811	chr22:47027811:A:C	rs142831276	A	C	A	Hoxd9_MA0913.1	22	0	+	0	0	.
chr22	47044873	47044874	chr22:47044874:T:C	rs140539	T	C	C	Hoxd9_MA0913.1	15	0	-	0	0	.
chr22	47122934	47122935	chr22:47122935:G:A	rs2295245	G	A	G	Hoxd9_MA0913.1	0	1	+	7.945542581782417	6.997808858371956	GTAATTAAAG
chr22	47129200	47129201	chr22:47129201:G:A	rs544716015	G	A	G	Hoxd9_MA0913.1	28	0	+	0	0	.
chr22	47315745	47315746	chr22:47315746:C:A	rs9615149	C	A	C	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr22	47352510	47352511	chr22:47352511:C:T	rs77806664	C	T	C	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr22	47377076	47377077	chr22:47377077:C:T	rs145681055	C	T	C	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr22	47377113	47377114	chr22:47377114:G:A	rs9627013	G	A	G	Hoxd9_MA0913.1	19	0	+	0	0	.
chr22	47382484	47382485	chr22:47382485:C:T	rs2032477	C	T	C	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr22	47382489	47382490	chr22:47382490:T:C	rs2032478	T	C	T	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr22	47549902	47549903	chr22:47549903:T:A	rs5767801	T	A	t	Hoxd9_MA0913.1	20	0	-	0	0	.
chr22	47687090	47687091	chr22:47687091:A:G	rs4823671	A	G	A	Hoxd9_MA0913.1	18	0	-	0	0	.
chr22	47806278	47806279	chr22:47806279:A:G	rs62225104	A	G	A	Hoxd9_MA0913.1	23	0	-	0	0	.
chr22	47806888	47806889	chr22:47806889:A:C	rs12165791	A	C	A	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr22	47899667	47899668	chr22:47899668:A:C	rs738733	A	C	A	Hoxd9_MA0913.1	8	1	+	7.4016741070371435	5.402010467384603	CCCATAAAAA
chr22	48025171	48025172	chr22:48025172:A:G	rs9615257	A	G	A	Hoxd9_MA0913.1	17	0	+	0	0	.
chr22	48125967	48125968	chr22:48125968:C:T	rs1986290	C	T	c	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr22	48225909	48225910	chr22:48225910:C:T	rs5768453	C	T	C	Hoxd9_MA0913.1	28	0	+	0	0	.
chr22	48314344	48314345	chr22:48314345:G:T	rs470001	G	T	T	Hoxd9_MA0913.1	22	0	-	0	0	.
chr22	48428851	48428852	chr22:48428852:G:A	rs6007851	G	A	G	Hoxd9_MA0913.1	0	1	+	9.168223885413955	8.220490162003495	GTAATTAAAT
chr22	48464869	48464870	chr22:48464870:A:G	rs4585130	A	G	G	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr22	48580914	48580915	chr22:48580915:G:A	rs28537632	G	A	G	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr22	48785863	48785864	chr22:48785864:A:G	rs6010475	A	G	A	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr22	48868303	48868304	chr22:48868304:C:A	rs111361311	C	A	A	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr22	48889241	48889242	chr22:48889242:A:G	rs28411926	A	G	A	Hoxd9_MA0913.1	3	1	+	8.60979621184233	6.782177271347225	ACAATAAAAT
chr22	48903622	48903623	chr22:48903623:A:G	rs6009722	A	G	G	Hoxd9_MA0913.1	6	1	+	7.688740572647875	0.873319904868535	GCAGTTAAAT
chr22	48906174	48906175	chr22:48906175:C:T	rs736697	C	T	C	Hoxd9_MA0913.1	24	0	+	0	0	.
chr22	48907709	48907710	chr22:48907710:A:G	rs12160723	A	G	A	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr22	48944965	48944966	chr22:48944966:T:C	rs906304750	T	C	T	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr22	49067369	49067370	chr22:49067370:G:A	rs79308788	G	A	g	Hoxd9_MA0913.1	26	0	-	0	0	.
chr22	49153855	49153856	chr22:49153856:A:C	rs9616246	A	C	A	Hoxd9_MA0913.1	21	0	+	0	0	.
chr22	49198648	49198649	chr22:49198649:G:A	rs2858581	G	A	A	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr22	49220816	49220817	chr22:49220817:C:T	rs5770058	C	T	T	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr22	49231198	49231199	chr22:49231199:C:T	rs739087	C	T	T	Hoxd9_MA0913.1	15	0	-	0	0	.
chr22	49273958	49273959	chr22:49273959:G:A	rs17825961	G	A	G	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr22	49274045	49274046	chr22:49274046:C:T	rs7286933	C	T	C	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr22	49341141	49341142	chr22:49341142:A:G	rs848733	A	G	G	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr22	49381082	49381083	chr22:49381083:T:C	rs5770341	T	C	C	Hoxd9_MA0913.1	12	0	+	0	0	.
chr22	49453583	49453584	chr22:49453584:A:G	rs151127281	A	G	A	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr22	49453589	49453590	chr22:49453590:C:T	rs713826	C	T	T	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr22	49519709	49519710	chr22:49519710:C:T	rs62231360	C	T	C	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr22	49521126	49521127	chr22:49521127:C:T	rs62231362	C	T	C	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr22	49566580	49566581	chr22:49566581:C:T	rs135827	C	T	T	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr22	49584551	49584552	chr22:49584552:G:C	rs135852	G	C	G	Hoxd9_MA0913.1	15	0	+	0	0	.
chr22	49633108	49633109	chr22:49633109:G:A	rs539306363	G	A	G	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr22	49660741	49660742	chr22:49660742:C:A	rs11705166	C	A	C	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr22	49868073	49868074	chr22:49868074:T:C	rs114569597	T	C	T	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr22	49933222	49933223	chr22:49933223:G:A	rs62234025	G	A	G	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr22	49933233	49933234	chr22:49933234:A:G	rs62234026	A	G	G	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr22	50066891	50066892	chr22:50066892:G:C	rs9617142	G	C	G	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr22	50119033	50119034	chr22:50119034:G:A	rs9617082	G	A	G	Hoxd9_MA0913.1	12	0	-	0	0	.
chr22	50140073	50140074	chr22:50140074:A:G	rs2340602	A	G	A	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr22	50155431	50155432	chr22:50155432:C:T	rs4838855	C	T	N	Hoxd9_MA0913.1	13	0	-	0	0	.
chr22	50241041	50241042	chr22:50241042:C:T	rs6010216	C	T	T	Hoxd9_MA0913.1	1	1	+	8.60979621184233	8.261660584113304	ACAATAAAAT
chr22	50508766	50508767	chr22:50508767:T:C	rs45529631	T	C	T	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr22	50534656	50534657	chr22:50534657:G:A	rs547350430	G	A	g	Hoxd9_MA0913.1	16	0	+	0	0	.
chr22	50568286	50568287	chr22:50568287:G:A	rs2334104	G	A	G	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr22	50595410	50595411	chr22:50595411:C:G	rs7284429	C	G	-	Hoxd9_MA0913.1	22	0	-	0	0	.
chr22	50635464	50635465	chr22:50635465:C:G	rs5770964	C	G	C	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr3	128917	128918	chr3:128918:C:A	rs1400183	C	A	C	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr3	194039	194040	chr3:194040:C:T	rs55922356	C	T	C	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr3	349812	349813	chr3:349813:A:G	chr3:349813:A:G	A	G	A	Hoxd9_MA0913.1	27	0	-	0	0	.
chr3	714494	714495	chr3:714495:T:G	rs75323977	T	G	T	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr3	856499	856500	chr3:856500:A:G	rs11131128	A	G	G	Hoxd9_MA0913.1	5	1	+	9.801341972390743	3.5796788194948737	GCAATAAAAA
chr3	973625	973626	chr3:973626:G:A	rs114663153	G	A	G	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr3	1072009	1072010	chr3:1072010:G:A	rs12630055	G	A	G	Hoxd9_MA0913.1	0	1	+	8.334848631621252	7.387114908210791	GCAATAAAAG
chr3	1395199	1395200	chr3:1395200:A:G	rs17038614	A	G	A	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr3	1469176	1469177	chr3:1469177:C:G	rs9832599	C	G	C	Hoxd9_MA0913.1	0	1	-	9.760171550280933	8.282172881897674	GCAATTAAAA
chr3	1527735	1527736	chr3:1527736:T:G	rs73001630	T	G	G	Hoxd9_MA0913.1	4	1	+	9.55752993525279	6.265395683477809	GCAATAAAAT
chr3	1578013	1578014	chr3:1578014:T:C	rs2128253	T	C	T	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr3	1616806	1616807	chr3:1616807:G:A	rs7620717	G	A	A	Hoxd9_MA0913.1	14	0	-	0	0	.
chr3	1616838	1616839	chr3:1616839:A:G	rs280121	A	G	A	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr3	1728636	1728637	chr3:1728637:T:C	rs17043113	T	C	C	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr3	2003164	2003165	chr3:2003165:T:A	rs62246793	T	A	T	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr3	2248113	2248114	chr3:2248114:G:A	rs1403635	G	A	G	Hoxd9_MA0913.1	8	1	+	7.984561357794846	9.55752993525279	GCAATAAAGT
chr3	2372368	2372369	chr3:2372369:A:C	rs57008796	A	C	A	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr3	2391490	2391491	chr3:2391491:A:G	rs13077123	A	G	A	Hoxd9_MA0913.1	3	1	+	7.984561357794846	6.156942417299742	GCAATAAAGT
chr3	2578769	2578770	chr3:2578770:C:T	rs12715075	C	T	T	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr3	2615132	2615133	chr3:2615133:A:G	rs13064095	A	G	A	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr3	2710268	2710269	chr3:2710269:G:A	rs2675291	G	A	A	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr3	2837927	2837928	chr3:2837928:A:C	rs7637288	A	C	A	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr3	2962210	2962211	chr3:2962211:G:A	rs6782080	G	A	A	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr3	3126731	3126732	chr3:3126732:G:C	rs78924331	G	C	G	Hoxd9_MA0913.1	22	0	+	0	0	.
chr3	3551605	3551606	chr3:3551606:C:G	rs7650676	C	G	C	Hoxd9_MA0913.1	1	1	+	8.082713108822833	4.990148096538121	GCGATTAAAA
chr3	3562020	3562021	chr3:3562021:G:A	rs7642870	G	A	A	Hoxd9_MA0913.1	20	0	+	0	0	.
chr3	3599180	3599181	chr3:3599181:A:C	rs1488410	A	C	C	Hoxd9_MA0913.1	6	1	+	8.678133135028622	4.203556272360415	GCAATTAAAC
chr3	3772325	3772326	chr3:3772326:C:T	rs1628140	C	T	C	Hoxd9_MA0913.1	29	0	+	0	0	.
chr3	3951874	3951875	chr3:3951875:T:G	rs2596861	T	G	T	Hoxd9_MA0913.1	24	0	+	0	0	.
chr3	4044514	4044515	chr3:4044515:G:T	rs111302595	G	T	G	Hoxd9_MA0913.1	1	1	-	8.635860738282448	6.216042362257189	GCCATAAAAT
chr3	4064229	4064230	chr3:4064230:A:G	rs811254	A	G	G	Hoxd9_MA0913.1	15	0	+	0	0	.
chr3	4163289	4163290	chr3:4163290:A:G	rs1087727	A	G	G	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr3	4195351	4195352	chr3:4195352:G:A	rs6777465	G	A	G	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr3	4597194	4597195	chr3:4597195:C:A	rs555074111	C	A	C	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr3	4722486	4722487	chr3:4722487:A:G	rs9311400	A	G	A	Hoxd9_MA0913.1	5	1	+	8.853608248980283	2.631945096084414	ACAATAAAAA
chr3	4722492	4722493	chr3:4722493:A:G	rs9311401	A	G	A	Hoxd9_MA0913.1	11	0	+	0	0	.
chr3	4757155	4757156	chr3:4757156:T:G	rs2015714	T	G	G	Hoxd9_MA0913.1	28	0	-	0	0	.
chr3	4853874	4853875	chr3:4853875:G:A	rs9311425	G	A	G	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr3	4898167	4898168	chr3:4898168:C:A	rs12489118	C	A	C	Hoxd9_MA0913.1	24	0	+	0	0	.
chr3	4908005	4908006	chr3:4908006:C:G	rs17788530	C	G	C	Hoxd9_MA0913.1	24	0	+	0	0	.
chr3	4989275	4989276	chr3:4989276:C:T	rs2137947	C	T	C	Hoxd9_MA0913.1	26	0	-	0	0	.
chr3	5052172	5052173	chr3:5052173:G:A	rs17791096	G	A	A	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr3	5138765	5138766	chr3:5138766:A:G	rs2291865	A	G	G	Hoxd9_MA0913.1	26	0	-	0	0	.
chr3	5203460	5203461	chr3:5203461:T:G	rs341981	T	G	T	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr3	5298413	5298414	chr3:5298414:A:G	rs145216803	A	G	A	Hoxd9_MA0913.1	29	0	-	0	0	.
chr3	5298419	5298420	chr3:5298420:A:G	rs62254349	A	G	A	Hoxd9_MA0913.1	23	0	-	0	0	.
chr3	5298432	5298433	chr3:5298433:C:T	rs62254350	C	T	C	Hoxd9_MA0913.1	10	0	-	0	0	.
chr3	5839846	5839847	chr3:5839847:T:C	rs2572645	T	C	c	Hoxd9_MA0913.1	26	0	+	0	0	.
chr3	5840616	5840617	chr3:5840617:T:C	rs1435349	T	C	C	Hoxd9_MA0913.1	13	0	-	0	0	.
chr3	5845967	5845968	chr3:5845968:C:T	rs62247525	C	T	C	Hoxd9_MA0913.1	10	0	+	0	0	.
chr3	5891007	5891008	chr3:5891008:C:G	rs892823	C	G	C	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr3	5923855	5923856	chr3:5923856:T:G	rs7616661	T	G	T	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr3	6040334	6040335	chr3:6040335:A:G	rs58398768	A	G	A	Hoxd9_MA0913.1	17	0	+	0	0	.
chr3	6275315	6275316	chr3:6275316:C:T	rs73007066	C	T	c	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr3	6618174	6618175	chr3:6618175:C:G	rs353673	C	G	G	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr3	6955051	6955052	chr3:6955052:A:G	rs116702229	A	G	A	Hoxd9_MA0913.1	13	0	-	0	0	.
chr3	7062937	7062938	chr3:7062938:T:A	rs4684547	T	A	T	Hoxd9_MA0913.1	16	0	+	0	0	.
chr3	7478396	7478397	chr3:7478397:C:T	rs752300	C	T	C	Hoxd9_MA0913.1	25	0	+	0	0	.
chr3	7576222	7576223	chr3:7576223:A:G	rs1564841	A	G	A	Hoxd9_MA0913.1	25	0	-	0	0	.
chr3	7788996	7788997	chr3:7788997:T:C	rs13324601	T	C	T	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr3	7798795	7798796	chr3:7798796:A:G	rs162213	A	G	A	Hoxd9_MA0913.1	18	0	+	0	0	.
chr3	7798945	7798946	chr3:7798946:C:T	rs1488474	C	T	C	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr3	7870957	7870958	chr3:7870958:G:T	rs9838153	G	T	T	Hoxd9_MA0913.1	0	1	+	8.531537147691377	5.494394451738508	GTCATAAAAA
chr3	8466828	8466829	chr3:8466829:T:C	rs9858072	T	C	T	Hoxd9_MA0913.1	15	0	-	0	0	.
chr3	8555072	8555073	chr3:8555073:C:T	rs17049248	C	T	T	Hoxd9_MA0913.1	12	0	+	0	0	.
chr3	8932814	8932815	chr3:8932815:T:C	rs45617043	T	C	T	Hoxd9_MA0913.1	20	0	+	0	0	.
chr3	8937344	8937345	chr3:8937345:C:T	rs78587561	C	T	C	Hoxd9_MA0913.1	16	0	+	0	0	.
chr3	9111921	9111922	chr3:9111922:A:C	rs421915	A	C	A	Hoxd9_MA0913.1	21	0	-	0	0	.
chr3	9151533	9151534	chr3:9151534:A:G	rs73118610	A	G	A	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr3	9151565	9151566	chr3:9151566:A:C	rs1410939141	A	C	A	Hoxd9_MA0913.1	12	0	+	0	0	.
chr3	9231431	9231432	chr3:9231432:C:A	rs2700325	C	A	C	Hoxd9_MA0913.1	26	0	+	0	0	.
chr3	9253195	9253196	chr3:9253196:C:T	rs2600175	C	T	c	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr3	9450655	9450656	chr3:9450656:T:C	rs1152314	T	C	T	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr3	9517076	9517077	chr3:9517077:A:G	rs114529032	A	G	A	Hoxd9_MA0913.1	20	0	-	0	0	.
chr3	9792301	9792302	chr3:9792302:C:T	rs293778	C	T	C	Hoxd9_MA0913.1	0	1	-	7.75646393805828	6.808730214647819	GCCATTAAAC
chr3	9884663	9884664	chr3:9884664:A:G	rs11918795	A	G	G	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr3	10519331	10519332	chr3:10519332:C:T	rs9879515	C	T	C	Hoxd9_MA0913.1	18	0	+	0	0	.
chr3	10775821	10775822	chr3:10775822:C:T	rs2596833	C	T	C	Hoxd9_MA0913.1	23	0	+	0	0	.
chr3	10844921	10844922	chr3:10844922:A:G	rs6798171	A	G	G	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr3	10932469	10932470	chr3:10932470:C:T	rs1881370	C	T	T	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr3	10984996	10984997	chr3:10984997:G:A	rs73025318	G	A	G	Hoxd9_MA0913.1	22	0	-	0	0	.
chr3	10985004	10985005	chr3:10985005:T:C	rs60402125	T	C	T	Hoxd9_MA0913.1	14	0	-	0	0	.
chr3	11054150	11054151	chr3:11054151:C:A	rs9854424	C	A	C	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr3	11504675	11504676	chr3:11504676:C:T	rs4553959	C	T	T	Hoxd9_MA0913.1	1	1	+	7.83890107168488	7.490765443955856	GCGATTAAAT
chr3	11651394	11651395	chr3:11651395:T:C	rs6804121	T	C	T	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr3	11749235	11749236	chr3:11749236:G:A	rs301554	G	A	A	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr3	12005029	12005030	chr3:12005030:A:G	rs2623880	A	G	A	Hoxd9_MA0913.1	5	1	+	8.323343304007485	2.101680151111617	CCAATAAAAA
chr3	12007962	12007963	chr3:12007963:T:A	rs2618387	T	A	A	Hoxd9_MA0913.1	11	0	+	0	0	.
chr3	12191981	12191982	chr3:12191982:A:G	rs310766	A	G	A	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr3	12198351	12198352	chr3:12198352:C:T	rs1663070	C	T	T	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr3	12239370	12239371	chr3:12239371:G:A	rs113766050	G	A	G	Hoxd9_MA0913.1	25	0	-	0	0	.
chr3	12316992	12316993	chr3:12316993:G:A	rs13433696	G	A	A	Hoxd9_MA0913.1	12	0	-	0	0	.
chr3	12542899	12542900	chr3:12542900:A:G	rs2454432	A	G	A	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr3	12618966	12618967	chr3:12618967:G:C	rs28462331	G	C	C	Hoxd9_MA0913.1	28	0	+	0	0	.
chr3	12626284	12626285	chr3:12626285:A:T	rs11711419	A	T	A	Hoxd9_MA0913.1	14	0	-	0	0	.
chr3	12687985	12687986	chr3:12687986:T:G	rs4684111	T	G	T	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr3	12751661	12751662	chr3:12751662:G:A	rs114423776	G	A	G	Hoxd9_MA0913.1	16	0	+	0	0	.
chr3	12780647	12780648	chr3:12780648:T:G	rs6763619	T	G	T	Hoxd9_MA0913.1	14	0	+	0	0	.
chr3	12892037	12892038	chr3:12892038:A:C	rs910931525	A	C	A	Hoxd9_MA0913.1	11	0	+	0	0	.
chr3	12958439	12958440	chr3:12958440:T:C	rs1529755	T	C	T	Hoxd9_MA0913.1	17	0	+	0	0	.
chr3	13483720	13483721	chr3:13483721:C:G	rs539065799	C	G	C	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr3	13839881	13839882	chr3:13839882:A:G	rs139748895	A	G	A	Hoxd9_MA0913.1	26	0	+	0	0	.
chr3	13857120	13857121	chr3:13857121:C:T	rs9819887	C	T	C	Hoxd9_MA0913.1	9	1	+	8.719303557138431	9.55752993525279	GCAATAAAAC
chr3	14530276	14530277	chr3:14530277:G:A	rs4685186	G	A	A	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr3	14867082	14867083	chr3:14867083:C:G	rs17040428	C	G	C	Hoxd9_MA0913.1	15	0	-	0	0	.
chr3	15182834	15182835	chr3:15182835:C:A	rs2077619	C	A	A	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr3	15205606	15205607	chr3:15205607:C:T	rs143147141	C	T	C	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr3	15405555	15405556	chr3:15405556:A:G	rs140935072	A	G	A	Hoxd9_MA0913.1	11	0	+	0	0	.
chr3	15635306	15635307	chr3:15635307:C:T	rs141803585	C	T	C	Hoxd9_MA0913.1	29	0	-	0	0	.
chr3	15647550	15647551	chr3:15647551:C:T	rs73145546	C	T	C	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr3	15655401	15655402	chr3:15655402:G:T	rs2470532	G	T	G	Hoxd9_MA0913.1	22	0	+	0	0	.
chr3	15792395	15792396	chr3:15792396:C:G	rs6762442	C	G	G	Hoxd9_MA0913.1	12	0	+	0	0	.
chr3	15811085	15811086	chr3:15811086:T:A	rs9848007	T	A	T	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr3	16048881	16048882	chr3:16048882:G:A	rs557595333	G	A	G	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr3	16211502	16211503	chr3:16211503:G:A	rs7609664	G	A	G	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr3	16378564	16378565	chr3:16378565:A:G	rs34151744	A	G	A	Hoxd9_MA0913.1	14	0	-	0	0	.
chr3	16456964	16456965	chr3:16456965:T:G	rs116076708	T	G	T	Hoxd9_MA0913.1	4	1	+	8.531537147691377	5.239402895916397	GTCATAAAAA
chr3	16565328	16565329	chr3:16565329:A:C	rs17042414	A	C	A	Hoxd9_MA0913.1	6	1	+	8.838502353310592	4.363925490642385	GCCATTAAAA
chr3	16899988	16899989	chr3:16899989:G:C	rs13065811	G	C	C	Hoxd9_MA0913.1	18	0	-	0	0	.
chr3	17089717	17089718	chr3:17089718:C:A	rs9822682	C	A	C	Hoxd9_MA0913.1	0	1	-	8.678133135028622	5.640990439075751	GCAATTAAAC
chr3	17166774	17166775	chr3:17166775:T:C	rs1138454	T	C	T	Hoxd9_MA0913.1	3	1	-	7.75646393805828	5.928844997563175	GCCATTAAAC
chr3	17330089	17330090	chr3:17330090:G:C	rs7630433	G	C	G	Hoxd9_MA0913.1	25	0	-	0	0	.
chr3	17810898	17810899	chr3:17810899:C:G	rs966398146	C	G	C	Hoxd9_MA0913.1	2	1	+	8.531537147691377	7.775747903203619	GTCATAAAAA
chr3	18694317	18694318	chr3:18694318:C:G	rs6793969	C	G	C	Hoxd9_MA0913.1	11	0	-	0	0	.
chr3	18756464	18756465	chr3:18756465:T:C	rs9858347	T	C	T	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr3	19002235	19002236	chr3:19002236:G:A	rs9863583	G	A	A	Hoxd9_MA0913.1	26	0	+	0	0	.
chr3	19002469	19002470	chr3:19002470:G:T	rs7430996	G	T	G	Hoxd9_MA0913.1	11	0	-	0	0	.
chr3	19776016	19776017	chr3:19776017:G:C	rs1506094	G	C	G	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr3	20055974	20055975	chr3:20055975:A:G	rs2948084	A	G	G	Hoxd9_MA0913.1	8	1	-	8.32301137036169	7.801678332738202	GCAATAAATA
chr3	20074945	20074946	chr3:20074946:G:A	rs9851449	G	A	A	Hoxd9_MA0913.1	15	0	-	0	0	.
chr3	20340456	20340457	chr3:20340457:A:G	rs116670058	A	G	A	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr3	20340470	20340471	chr3:20340471:A:G	rs193187592	A	G	A	Hoxd9_MA0913.1	2	1	+	7.932552609785828	6.25509416832773	GCAGTTAAAA
chr3	20349889	20349890	chr3:20349890:T:G	rs62241773	T	G	t	Hoxd9_MA0913.1	8	1	-	9.453206344661718	7.453542705009177	GTAATAAAAA
chr3	20406724	20406725	chr3:20406725:C:T	rs533304180	C	T	C	Hoxd9_MA0913.1	25	0	+	0	0	.
chr3	20659223	20659224	chr3:20659224:C:A	rs75847235	C	A	C	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr3	20751975	20751976	chr3:20751976:C:T	rs77015326	C	T	C	Hoxd9_MA0913.1	17	0	-	0	0	.
chr3	20984929	20984930	chr3:20984930:A:G	rs73188338	A	G	A	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr3	21256202	21256203	chr3:21256203:A:G	rs9860254	A	G	A	Hoxd9_MA0913.1	12	0	+	0	0	.
chr3	21520531	21520532	chr3:21520532:T:C	rs73134904	T	C	T	Hoxd9_MA0913.1	5	1	-	8.879672775420401	2.658009622524533	GCCATAAAAA
chr3	21628119	21628120	chr3:21628120:C:G	chr3:21628120:C:G	C	G	C	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr3	21654646	21654647	chr3:21654647:A:C	rs12152385	A	C	A	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr3	21755223	21755224	chr3:21755224:A:T	rs62236199	A	T	A	Hoxd9_MA0913.1	13	0	+	0	0	.
chr3	21839461	21839462	chr3:21839462:A:C	rs17009729	A	C	A	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr3	21901511	21901512	chr3:21901512:G:C	rs259484	G	C	G	Hoxd9_MA0913.1	12	0	+	0	0	.
chr3	21934625	21934626	chr3:21934626:A:G	rs1553085	A	G	A	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr3	22067354	22067355	chr3:22067355:T:C	rs1229167250	T	C	T	Hoxd9_MA0913.1	1	1	+	9.209394307523764	9.55752993525279	GTAATAAAAT
chr3	22098303	22098304	chr3:22098304:C:G	rs1383078	C	G	t	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr3	22118114	22118115	chr3:22118115:A:G	rs746926315	A	G	A	Hoxd9_MA0913.1	24	0	+	0	0	.
chr3	22160750	22160751	chr3:22160751:A:G	rs35780386	A	G	A	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr3	22170864	22170865	chr3:22170865:A:C	rs2035850	A	C	A	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr3	22392501	22392502	chr3:22392502:C:T	rs2060663	C	T	t	Hoxd9_MA0913.1	10	0	-	0	0	.
chr3	22556341	22556342	chr3:22556342:C:T	rs6808942	C	T	C	Hoxd9_MA0913.1	25	0	-	0	0	.
chr3	22564230	22564231	chr3:22564231:C:T	chr3:22564231:C:T	C	T	C	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr3	22564236	22564237	chr3:22564237:T:C	rs56359630	T	C	T	Hoxd9_MA0913.1	4	1	+	8.853608248980283	5.561473997205303	ACAATAAAAA
chr3	22632192	22632193	chr3:22632193:G:C	rs78481537	G	C	G	Hoxd9_MA0913.1	27	0	-	0	0	.
chr3	22859123	22859124	chr3:22859124:G:T	rs33108	G	T	G	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr3	22908900	22908901	chr3:22908901:T:C	rs696505	T	C	C	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr3	22980385	22980386	chr3:22980386:T:C	rs79184754	T	C	T	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr3	23244508	23244509	chr3:23244509:C:T	rs80099969	C	T	C	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr3	23244509	23244510	chr3:23244510:A:G	rs4858484	A	G	a	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr3	23845913	23845914	chr3:23845914:T:G	rs7615238	T	G	T	Hoxd9_MA0913.1	21	0	+	0	0	.
chr3	23964267	23964268	chr3:23964268:A:G	rs6790557	A	G	G	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr3	24211906	24211907	chr3:24211907:G:T	rs826254	G	T	T	Hoxd9_MA0913.1	10	0	+	0	0	.
chr3	24290105	24290106	chr3:24290106:A:C	rs144128590	A	C	A	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr3	24299631	24299632	chr3:24299632:T:C	rs9842492	T	C	T	Hoxd9_MA0913.1	1	1	+	8.531537147691377	8.879672775420401	GTCATAAAAA
chr3	24339894	24339895	chr3:24339895:T:G	rs7635707	T	G	T	Hoxd9_MA0913.1	17	0	-	0	0	.
chr3	24438351	24438352	chr3:24438352:A:G	rs10510544	A	G	A	Hoxd9_MA0913.1	2	1	+	7.932552609785828	6.25509416832773	GCAGTTAAAA
chr3	24615286	24615287	chr3:24615287:T:G	rs10490833	T	G	T	Hoxd9_MA0913.1	13	0	-	0	0	.
chr3	24628467	24628468	chr3:24628468:A:C	rs2362758	A	C	C	Hoxd9_MA0913.1	4	1	-	9.801341972390743	6.509207720615763	GCAATAAAAA
chr3	24756123	24756124	chr3:24756124:G:T	rs13088027	G	T	T	Hoxd9_MA0913.1	21	0	-	0	0	.
chr3	24774311	24774312	chr3:24774312:A:G	rs9874143	A	G	A	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr3	25022103	25022104	chr3:25022104:C:T	rs1909521	C	T	C	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr3	25056346	25056347	chr3:25056347:T:C	rs4858695	T	C	T	Hoxd9_MA0913.1	4	1	+	9.55752993525279	6.265395683477809	GCAATAAAAT
chr3	25234905	25234906	chr3:25234906:G:C	rs73044253	G	C	G	Hoxd9_MA0913.1	29	0	-	0	0	.
chr3	25234924	25234925	chr3:25234925:G:A	rs6765179	G	A	A	Hoxd9_MA0913.1	10	0	-	0	0	.
chr3	25351088	25351089	chr3:25351089:A:G	rs17016260	A	G	A	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr3	25429335	25429336	chr3:25429336:A:G	rs182523744	A	G	A	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr3	25499879	25499880	chr3:25499880:A:G	rs1406575	A	G	A	Hoxd9_MA0913.1	26	0	+	0	0	.
chr3	25817958	25817959	chr3:25817959:C:T	rs62236903	C	T	C	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr3	26058273	26058274	chr3:26058274:C:G	rs4130939	C	G	C	Hoxd9_MA0913.1	20	0	+	0	0	.
chr3	26712288	26712289	chr3:26712289:A:G	rs953919	A	G	A	Hoxd9_MA0913.1	27	0	-	0	0	.
chr3	27574304	27574305	chr3:27574305:A:G	rs2642925	A	G	A	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr3	27591404	27591405	chr3:27591405:C:G	rs2642909	C	G	G	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr3	27779503	27779504	chr3:27779504:T:C	rs9838021	T	C	C	Hoxd9_MA0913.1	13	0	+	0	0	.
chr3	27955430	27955431	chr3:27955431:C:T	rs453026	C	T	c	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr3	27976997	27976998	chr3:27976998:T:C	rs182937007	T	C	T	Hoxd9_MA0913.1	3	1	-	9.51635951314298	7.688740572647875	GCAATTAAAT
chr3	28229769	28229770	chr3:28229770:C:G	rs6810242	C	G	G	Hoxd9_MA0913.1	11	0	+	0	0	.
chr3	28249451	28249452	chr3:28249452:A:G	rs12498078	A	G	A	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr3	28350133	28350134	chr3:28350134:A:C	rs7649498	A	C	C	Hoxd9_MA0913.1	12	0	-	0	0	.
chr3	28352865	28352866	chr3:28352866:A:T	rs9968098	A	T	A	Hoxd9_MA0913.1	1	1	-	8.531537147691377	6.459854399395143	GTCATAAAAA
chr3	28664365	28664366	chr3:28664366:A:G	rs35353146	A	G	A	Hoxd9_MA0913.1	18	0	+	0	0	.
chr3	28840696	28840697	chr3:28840697:C:T	rs4680791	C	T	T	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr3	28879216	28879217	chr3:28879217:A:G	rs6802332	A	G	A	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr3	29064159	29064160	chr3:29064160:A:G	rs619656	A	G	G	Hoxd9_MA0913.1	5	1	+	9.209394307523764	2.9877311546278964	GTAATAAAAT
chr3	29064183	29064184	chr3:29064184:G:A	rs17662956	G	A	G	Hoxd9_MA0913.1	29	0	+	0	0	.
chr3	29291491	29291492	chr3:29291492:T:A	rs148092082	T	A	T	Hoxd9_MA0913.1	9	1	-	9.801341972390743	9.55752993525279	GCAATAAAAA
chr3	29393868	29393869	chr3:29393869:A:T	rs113124420	A	T	a	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr3	29583299	29583300	chr3:29583300:C:G	rs74788590	C	G	C	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr3	29597536	29597537	chr3:29597537:T:A	rs80031856	T	A	T	Hoxd9_MA0913.1	6	1	-	7.932552609785828	5.5092326622518435	GCAGTTAAAA
chr3	29636218	29636219	chr3:29636219:G:T	rs9845781	G	T	T	Hoxd9_MA0913.1	29	0	-	0	0	.
chr3	29636239	29636240	chr3:29636240:A:G	rs9882996	A	G	A	Hoxd9_MA0913.1	8	1	-	8.32301137036169	7.801678332738202	GCAATAAATA
chr3	29729738	29729739	chr3:29729739:T:C	rs55667387	T	C	T	Hoxd9_MA0913.1	23	0	-	0	0	.
chr3	29801734	29801735	chr3:29801735:C:G	rs4680729	C	G	G	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr3	30187454	30187455	chr3:30187455:A:T	rs1433987	A	T	A	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr3	30206678	30206679	chr3:30206679:T:G	rs1434007	T	G	T	Hoxd9_MA0913.1	19	0	-	0	0	.
chr3	30242002	30242003	chr3:30242003:T:G	rs75956578	T	G	T	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr3	30597676	30597677	chr3:30597677:T:G	rs957195193	T	G	T	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr3	30597715	30597716	chr3:30597716:G:A	rs78320401	G	A	G	Hoxd9_MA0913.1	19	0	+	0	0	.
chr3	30614981	30614982	chr3:30614982:C:A	rs13081419	C	A	A	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr3	30615010	30615011	chr3:30615011:G:A	rs140193545	G	A	G	Hoxd9_MA0913.1	17	0	+	0	0	.
chr3	30627021	30627022	chr3:30627022:A:G	rs538265299	A	G	A	Hoxd9_MA0913.1	16	0	+	0	0	.
chr3	30742993	30742994	chr3:30742994:C:T	rs1995450	C	T	C	Hoxd9_MA0913.1	19	0	+	0	0	.
chr3	31170721	31170722	chr3:31170722:T:C	rs4955376	T	C	C	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr3	31277862	31277863	chr3:31277863:A:C	rs7652050	A	C	C	Hoxd9_MA0913.1	7	1	+	8.879672775420401	5.585826023701971	GCCATAAAAA
chr3	31443927	31443928	chr3:31443928:G:C	rs9879056	G	C	.	Hoxd9_MA0913.1	23	0	-	0	0	.
chr3	31675638	31675639	chr3:31675639:A:C	rs2013777	A	C	C	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr3	31893040	31893041	chr3:31893041:G:A	rs9841850	G	A	G	Hoxd9_MA0913.1	10	0	+	0	0	.
chr3	31923405	31923406	chr3:31923406:G:A	rs7644177	G	A	A	Hoxd9_MA0913.1	16	0	+	0	0	.
chr3	32144516	32144517	chr3:32144517:G:A	rs76954938	G	A	G	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr3	32467029	32467030	chr3:32467030:C:T	rs67391608	C	T	C	Hoxd9_MA0913.1	0	1	-	8.719303557138431	7.7715698337279715	GCAATAAAAC
chr3	32960811	32960812	chr3:32960812:C:G	rs9917826	C	G	C	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr3	33758956	33758957	chr3:33758957:G:A	rs35179951	G	A	A	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr3	33859905	33859906	chr3:33859906:A:G	rs4679095	A	G	A	Hoxd9_MA0913.1	5	1	+	7.973723031895638	1.7520598789997708	GCAGTAAAAA
chr3	33860861	33860862	chr3:33860862:G:A	rs9822671	G	A	A	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr3	33897542	33897543	chr3:33897543:T:C	rs112825532	T	C	T	Hoxd9_MA0913.1	13	0	+	0	0	.
chr3	34175903	34175904	chr3:34175904:T:C	rs1348038	T	C	T	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr3	34179932	34179933	chr3:34179933:T:C	rs72619965	T	C	T	Hoxd9_MA0913.1	9	1	+	9.51635951314298	8.678133135028622	GCAATTAAAT
chr3	34895633	34895634	chr3:34895634:T:C	rs73061936	T	C	T	Hoxd9_MA0913.1	14	0	+	0	0	.
chr3	34958136	34958137	chr3:34958137:G:A	rs7649421	G	A	A	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr3	35488687	35488688	chr3:35488688:T:A	rs1403468	T	A	A	Hoxd9_MA0913.1	22	0	-	0	0	.
chr3	36214475	36214476	chr3:36214476:C:T	rs73830905	C	T	C	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr3	36244111	36244112	chr3:36244112:C:T	rs17034665	C	T	C	Hoxd9_MA0913.1	1	1	+	8.2283733949328	7.880237767203775	GCAATAAAGA
chr3	36452141	36452142	chr3:36452142:T:A	rs73831045	T	A	T	Hoxd9_MA0913.1	26	0	+	0	0	.
chr3	36598363	36598364	chr3:36598364:T:C	rs76227883	T	C	T	Hoxd9_MA0913.1	29	0	+	0	0	.
chr3	36908196	36908197	chr3:36908197:T:C	rs58676588	T	C	T	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr3	36964904	36964905	chr3:36964905:T:C	rs7649344	T	C	C	Hoxd9_MA0913.1	9	1	+	8.635860738282448	7.7976343601680895	GCCATAAAAT
chr3	37248330	37248331	chr3:37248331:C:T	rs336597	C	T	T	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr3	37526404	37526405	chr3:37526405:A:G	rs2162356	A	G	A	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr3	37541110	37541111	chr3:37541111:A:T	rs9862163	A	T	T	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr3	37713344	37713345	chr3:37713345:C:T	rs918726778	C	T	C	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr3	37715603	37715604	chr3:37715604:G:A	rs9841848	G	A	G	Hoxd9_MA0913.1	27	0	+	0	0	.
chr3	37782208	37782209	chr3:37782209:T:C	rs3845948	T	C	T	Hoxd9_MA0913.1	2	1	-	8.719303557138431	7.041845115680332	GCAATAAAAC
chr3	38468854	38468855	chr3:38468855:T:C	rs2284816	T	C	T	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr3	38730472	38730473	chr3:38730473:A:C	rs144508177	A	C	A	Hoxd9_MA0913.1	11	0	+	0	0	.
chr3	39176810	39176811	chr3:39176811:T:C	rs184354580	T	C	T	Hoxd9_MA0913.1	3	1	-	8.719303557138431	6.891684616643326	GCAATAAAAC
chr3	39416971	39416972	chr3:39416972:T:C	rs60134068	T	C	T	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr3	39532427	39532428	chr3:39532428:A:G	rs1615994	A	G	A	Hoxd9_MA0913.1	9	1	+	8.812437826870472	7.34594448610098	ACAATTAAAA
chr3	39533079	39533080	chr3:39533080:T:C	rs1768134	T	C	C	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr3	39967527	39967528	chr3:39967528:G:A	rs7616242	G	A	A	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr3	39971975	39971976	chr3:39971976:A:C	rs4591446	A	C	C	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr3	40079972	40079973	chr3:40079973:T:C	rs532670807	T	C	T	Hoxd9_MA0913.1	19	0	-	0	0	.
chr3	40153863	40153864	chr3:40153864:G:A	rs12486621	G	A	G	Hoxd9_MA0913.1	25	0	+	0	0	.
chr3	41169119	41169120	chr3:41169120:C:T	rs1544886	C	T	T	Hoxd9_MA0913.1	20	0	+	0	0	.
chr3	41565078	41565079	chr3:41565079:C:T	rs60094379	C	T	C	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr3	41626053	41626054	chr3:41626054:T:G	rs4973978	T	G	T	Hoxd9_MA0913.1	16	0	-	0	0	.
chr3	41881516	41881517	chr3:41881517:G:A	rs73081392	G	A	G	Hoxd9_MA0913.1	10	0	+	0	0	.
chr3	41894318	41894319	chr3:41894319:C:T	rs1716696	C	T	C	Hoxd9_MA0913.1	10	0	-	0	0	.
chr3	42195195	42195196	chr3:42195196:A:G	rs184172839	A	G	A	Hoxd9_MA0913.1	26	0	+	0	0	.
chr3	42229381	42229382	chr3:42229382:C:T	rs11919824	C	T	C	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr3	42823777	42823778	chr3:42823778:G:A	rs35247064	G	A	G	Hoxd9_MA0913.1	23	0	-	0	0	.
chr3	43030322	43030323	chr3:43030323:A:C	rs697327	A	C	A	Hoxd9_MA0913.1	4	1	-	8.812437826870472	5.520303575095493	ACAATTAAAA
chr3	43511235	43511236	chr3:43511236:T:C	rs6772068	T	C	T	Hoxd9_MA0913.1	19	0	-	0	0	.
chr3	43888626	43888627	chr3:43888627:T:G	rs11710794	T	G	T	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr3	43888662	43888663	chr3:43888663:T:G	rs11710802	T	G	T	Hoxd9_MA0913.1	27	0	+	0	0	.
chr3	44027365	44027366	chr3:44027366:A:G	rs55815754	A	G	A	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr3	44051116	44051117	chr3:44051117:A:G	rs7625889	A	G	A	Hoxd9_MA0913.1	3	1	+	9.51635951314298	7.688740572647875	GCAATTAAAT
chr3	44185654	44185655	chr3:44185655:G:A	rs75867895	G	A	G	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr3	44237446	44237447	chr3:44237447:G:A	rs77366663	G	A	G	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr3	44422442	44422443	chr3:44422443:C:A	rs6790566	C	A	C	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr3	44462826	44462827	chr3:44462827:T:C	rs114612872	T	C	T	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr3	44685323	44685324	chr3:44685324:C:T	rs62244185	C	T	C	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr3	45019557	45019558	chr3:45019558:G:A	rs17570350	G	A	G	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr3	45120033	45120034	chr3:45120034:G:A	rs191954996	G	A	G	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr3	45232650	45232651	chr3:45232651:A:G	rs6810350	A	G	A	Hoxd9_MA0913.1	3	1	+	8.531537147691377	6.703918207196272	GTCATAAAAA
chr3	45546490	45546491	chr3:45546491:A:G	rs3821895	A	G	A	Hoxd9_MA0913.1	26	0	+	0	0	.
chr3	45636070	45636071	chr3:45636071:G:A	rs76308264	G	A	G	Hoxd9_MA0913.1	25	0	-	0	0	.
chr3	45636079	45636080	chr3:45636080:A:G	rs142891193	A	G	A	Hoxd9_MA0913.1	16	0	-	0	0	.
chr3	45677572	45677573	chr3:45677573:A:G	rs7641490	A	G	A	Hoxd9_MA0913.1	19	0	-	0	0	.
chr3	45861470	45861471	chr3:45861471:A:G	rs1125823	A	G	A	Hoxd9_MA0913.1	6	1	+	8.853608248980283	2.0381875812009422	ACAATAAAAA
chr3	46184672	46184673	chr3:46184673:T:C	rs34059564	T	C	C	Hoxd9_MA0913.1	23	0	-	0	0	.
chr3	46429595	46429596	chr3:46429596:A:G	rs2097281	A	G	A	Hoxd9_MA0913.1	14	0	+	0	0	.
chr3	46923706	46923707	chr3:46923707:C:G	rs2290546	C	G	G	Hoxd9_MA0913.1	29	0	+	0	0	.
chr3	46932153	46932154	chr3:46932154:G:A	rs9841902	G	A	a	Hoxd9_MA0913.1	29	0	+	0	0	.
chr3	47154718	47154719	chr3:47154719:C:A	rs6766230	C	A	C	Hoxd9_MA0913.1	29	0	+	0	0	.
chr3	47512191	47512192	chr3:47512192:A:G	chr3:47512192:A:G	A	G	A	Hoxd9_MA0913.1	27	0	+	0	0	.
chr3	47814103	47814104	chr3:47814104:T:C	rs62263573	T	C	T	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr3	47814142	47814143	chr3:47814143:A:G	rs4858863	A	G	G	Hoxd9_MA0913.1	21	0	+	0	0	.
chr3	48869035	48869036	chr3:48869036:T:G	rs4974079	T	G	G	Hoxd9_MA0913.1	10	0	+	0	0	.
chr3	48917438	48917439	chr3:48917439:C:T	rs753810660	C	T	C	Hoxd9_MA0913.1	26	0	-	0	0	.
chr3	48919713	48919714	chr3:48919714:A:G	rs9850134	A	G	A	Hoxd9_MA0913.1	22	0	+	0	0	.
chr3	49256385	49256386	chr3:49256386:T:G	rs147025639	T	G	T	Hoxd9_MA0913.1	3	1	-	7.7976343601680895	3.3314036897680337	GCCATAAAAC
chr3	51100253	51100254	chr3:51100254:T:C	rs752643233	T	C	T	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr3	51479219	51479220	chr3:51479220:G:A	rs7625821	G	A	G	Hoxd9_MA0913.1	23	0	+	0	0	.
chr3	52090276	52090277	chr3:52090277:T:C	rs571106338	T	C	T	Hoxd9_MA0913.1	16	0	+	0	0	.
chr3	53123285	53123286	chr3:53123286:A:T	rs12630819	A	T	A	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr3	53328537	53328538	chr3:53328538:A:G	rs11707463	A	G	A	Hoxd9_MA0913.1	20	0	+	0	0	.
chr3	53710621	53710622	chr3:53710622:C:T	rs17053382	C	T	C	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr3	54129842	54129843	chr3:54129843:T:C	rs9831964	T	C	C	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr3	54426298	54426299	chr3:54426299:G:A	rs7429237	G	A	A	Hoxd9_MA0913.1	14	0	+	0	0	.
chr3	54773292	54773293	chr3:54773293:T:C	rs2360026	T	C	C	Hoxd9_MA0913.1	9	1	+	9.51635951314298	8.678133135028622	GCAATTAAAT
chr3	54845220	54845221	chr3:54845221:C:T	rs3773604	C	T	C	Hoxd9_MA0913.1	16	0	-	0	0	.
chr3	54859662	54859663	chr3:54859663:A:G	rs890219128	A	G	A	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr3	55122341	55122342	chr3:55122342:T:C	rs697932	T	C	T	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr3	55124196	55124197	chr3:55124197:A:G	rs17759204	A	G	A	Hoxd9_MA0913.1	4	1	-	8.282172881897674	4.9900386301226956	CCAATTAAAA
chr3	55436631	55436632	chr3:55436632:G:T	chr3:55436632:G:T	G	T	G	Hoxd9_MA0913.1	24	0	-	0	0	.
chr3	55573600	55573601	chr3:55573601:G:A	rs4538346	G	A	G	Hoxd9_MA0913.1	16	0	-	0	0	.
chr3	55629475	55629476	chr3:55629476:C:G	rs9818576	C	G	G	Hoxd9_MA0913.1	0	1	-	9.209394307523764	7.731395639140507	GTAATAAAAT
chr3	55884264	55884265	chr3:55884265:C:T	rs373802839	C	T	C	Hoxd9_MA0913.1	21	0	+	0	0	.
chr3	55904242	55904243	chr3:55904243:T:C	rs80284383	T	C	T	Hoxd9_MA0913.1	20	0	-	0	0	.
chr3	55970738	55970739	chr3:55970739:C:T	rs13073082	C	T	T	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr3	55988775	55988776	chr3:55988776:C:G	rs6783462	C	G	C	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr3	56005512	56005513	chr3:56005513:T:C	rs55926504	T	C	T	Hoxd9_MA0913.1	15	0	-	0	0	.
chr3	56013360	56013361	chr3:56013361:G:A	rs17216524	G	A	G	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr3	56053915	56053916	chr3:56053916:A:C	rs78318205	A	C	A	Hoxd9_MA0913.1	24	0	+	0	0	.
chr3	56787348	56787349	chr3:56787349:C:A	rs144085693	C	A	C	Hoxd9_MA0913.1	18	0	+	0	0	.
chr3	56799342	56799343	chr3:56799343:A:C	chr3:56799343:A:C	A	C	A	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr3	56823758	56823759	chr3:56823759:C:T	rs11929318	C	T	T	Hoxd9_MA0913.1	18	0	+	0	0	.
chr3	56884760	56884761	chr3:56884761:T:G	rs62251069	T	G	T	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr3	57069840	57069841	chr3:57069841:C:T	rs4681948	C	T	C	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr3	57911854	57911855	chr3:57911855:G:A	rs9849219	G	A	G	Hoxd9_MA0913.1	27	0	-	0	0	.
chr3	57932213	57932214	chr3:57932214:A:G	rs704530	A	G	G	Hoxd9_MA0913.1	14	0	+	0	0	.
chr3	58039723	58039724	chr3:58039724:T:G	rs9856128	T	G	T	Hoxd9_MA0913.1	11	0	-	0	0	.
chr3	58072642	58072643	chr3:58072643:G:A	rs3852008	G	A	G	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr3	58084619	58084620	chr3:58084620:A:G	rs13072975	A	G	A	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr3	58242711	58242712	chr3:58242712:T:A	rs10866014	T	A	T	Hoxd9_MA0913.1	12	0	-	0	0	.
chr3	58475488	58475489	chr3:58475489:A:T	rs4681856	A	T	A	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr3	58825210	58825211	chr3:58825211:G:A	rs773233378	G	A	G	Hoxd9_MA0913.1	0	1	+	8.531537147691377	7.583803424280916	GTCATAAAAA
chr3	59451935	59451936	chr3:59451936:T:C	rs17060718	T	C	T	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr3	59703458	59703459	chr3:59703459:A:G	rs6446078	A	G	G	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr3	59765979	59765980	chr3:59765980:A:C	rs293606	A	C	A	Hoxd9_MA0913.1	6	1	+	8.853608248980283	4.379031386312077	ACAATAAAAA
chr3	59771745	59771746	chr3:59771746:C:G	rs492234	C	G	C	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr3	59771757	59771758	chr3:59771758:G:A	rs49413	G	A	A	Hoxd9_MA0913.1	0	1	+	8.531537147691377	7.583803424280916	GTCATAAAAA
chr3	59927145	59927146	chr3:59927146:G:A	rs6793471	G	A	G	Hoxd9_MA0913.1	10	0	+	0	0	.
chr3	60025690	60025691	chr3:60025691:A:G	rs73840516	A	G	G	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr3	60103867	60103868	chr3:60103868:T:C	rs9311748	T	C	T	Hoxd9_MA0913.1	3	1	-	9.412035922551908	7.584416982056805	GTAATTAAAA
chr3	60187287	60187288	chr3:60187288:A:G	rs213424	A	G	A	Hoxd9_MA0913.1	26	0	+	0	0	.
chr3	60263212	60263213	chr3:60263213:T:C	rs79657546	T	C	T	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr3	60324240	60324241	chr3:60324241:A:G	rs1569349	A	G	G	Hoxd9_MA0913.1	28	0	-	0	0	.
chr3	60341530	60341531	chr3:60341531:G:A	rs3890406	G	A	A	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr3	60487555	60487556	chr3:60487556:A:C	rs9824052	A	C	A	Hoxd9_MA0913.1	2	1	+	8.281840948251881	7.360171751281539	GCAATTAATA
chr3	60559927	60559928	chr3:60559928:T:A	rs180999	T	A	T	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr3	60630918	60630919	chr3:60630919:T:C	rs10510851	T	C	T	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr3	60673311	60673312	chr3:60673312:A:G	rs62251501	A	G	A	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr3	60770623	60770624	chr3:60770624:C:G	rs6765136	C	G	G	Hoxd9_MA0913.1	19	0	+	0	0	.
chr3	61277187	61277188	chr3:61277188:C:T	rs74278876	C	T	C	Hoxd9_MA0913.1	19	0	+	0	0	.
chr3	61296166	61296167	chr3:61296167:A:G	rs7651321	A	G	G	Hoxd9_MA0913.1	11	0	-	0	0	.
chr3	61635100	61635101	chr3:61635101:A:G	rs4688261	A	G	G	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr3	61805732	61805733	chr3:61805733:C:T	rs75480068	C	T	C	Hoxd9_MA0913.1	10	0	+	0	0	.
chr3	61814882	61814883	chr3:61814883:A:G	rs66930137	A	G	A	Hoxd9_MA0913.1	25	0	-	0	0	.
chr3	61822227	61822228	chr3:61822228:G:A	rs187700060	G	A	G	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr3	61846635	61846636	chr3:61846636:T:C	rs60291426	T	C	T	Hoxd9_MA0913.1	3	1	-	8.323343304007485	6.495724363512382	CCAATAAAAA
chr3	61962283	61962284	chr3:61962284:C:T	rs56333420	C	T	C	Hoxd9_MA0913.1	0	1	-	9.55752993525279	8.60979621184233	GCAATAAAAT
chr3	61978518	61978519	chr3:61978519:T:C	rs111923856	T	C	T	Hoxd9_MA0913.1	29	0	+	0	0	.
chr3	62007991	62007992	chr3:62007992:A:G	rs9311833	A	G	G	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr3	62008029	62008030	chr3:62008030:G:T	rs9825906	G	T	G	Hoxd9_MA0913.1	27	0	+	0	0	.
chr3	62142269	62142270	chr3:62142270:G:A	rs56742191	G	A	A	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr3	62144567	62144568	chr3:62144568:C:G	rs140134272	C	G	C	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr3	62201591	62201592	chr3:62201592:T:G	chr3:62201592:T:G	T	G	T	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr3	62626106	62626107	chr3:62626107:C:A	rs2600852	C	A	A	Hoxd9_MA0913.1	23	0	+	0	0	.
chr3	62704215	62704216	chr3:62704216:G:A	rs13081878	G	A	A	Hoxd9_MA0913.1	22	0	-	0	0	.
chr3	62711052	62711053	chr3:62711053:G:T	rs4688325	G	T	T	Hoxd9_MA0913.1	27	0	+	0	0	.
chr3	62713524	62713525	chr3:62713525:C:T	rs9849251	C	T	T	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr3	63471677	63471678	chr3:63471678:C:T	rs28738794	C	T	C	Hoxd9_MA0913.1	15	0	-	0	0	.
chr3	63792109	63792110	chr3:63792110:T:C	rs17069378	T	C	T	Hoxd9_MA0913.1	5	1	-	7.984561357794846	1.7628982048989783	GCAATAAAGT
chr3	63859734	63859735	chr3:63859735:C:T	rs9848808	C	T	C	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr3	64084695	64084696	chr3:64084696:C:T	rs73120967	C	T	C	Hoxd9_MA0913.1	15	0	+	0	0	.
chr3	64150427	64150428	chr3:64150428:T:C	rs75857239	T	C	T	Hoxd9_MA0913.1	5	1	-	8.334848631621252	2.1131854787253816	GCAATAAAAG
chr3	64150433	64150434	chr3:64150434:G:A	rs26941	G	A	A	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr3	64509360	64509361	chr3:64509361:T:A	rs749779460	T	A	T	Hoxd9_MA0913.1	27	0	+	0	0	.
chr3	64587842	64587843	chr3:64587843:A:T	rs77519907	A	T	A	Hoxd9_MA0913.1	29	0	-	0	0	.
chr3	64665195	64665196	chr3:64665196:C:A	rs7627550	C	A	A	Hoxd9_MA0913.1	12	0	-	0	0	.
chr3	64905423	64905424	chr3:64905424:G:T	rs704447	G	T	T	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr3	64961566	64961567	chr3:64961567:C:T	rs1517923	C	T	C	Hoxd9_MA0913.1	1	1	+	8.323343304007485	7.97520767627846	CCAATAAAAA
chr3	65650809	65650810	chr3:65650810:A:G	rs7633294	A	G	G	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr3	65704971	65704972	chr3:65704972:C:T	rs4437178	C	T	C	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr3	65807458	65807459	chr3:65807459:C:T	rs56331708	C	T	T	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr3	65807489	65807490	chr3:65807490:G:A	rs55856805	G	A	A	Hoxd9_MA0913.1	18	0	+	0	0	.
chr3	65894860	65894861	chr3:65894861:T:C	rs9879658	T	C	T	Hoxd9_MA0913.1	5	1	-	8.2283733949328	2.006710242036932	GCAATAAAGA
chr3	65894862	65894863	chr3:65894863:T:C	rs75990228	T	C	T	Hoxd9_MA0913.1	3	1	-	8.2283733949328	6.4007544544376955	GCAATAAAGA
chr3	65920300	65920301	chr3:65920301:A:C	rs6445514	A	C	A	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr3	66084053	66084054	chr3:66084054:A:G	rs116737506	A	G	A	Hoxd9_MA0913.1	4	1	-	8.334848631621252	5.042714379846271	GCAATAAAAG
chr3	66138495	66138496	chr3:66138496:C:A	rs78285192	C	A	C	Hoxd9_MA0913.1	18	0	-	0	0	.
chr3	66304969	66304970	chr3:66304970:A:G	rs144633428	A	G	A	Hoxd9_MA0913.1	15	0	-	0	0	.
chr3	66343393	66343394	chr3:66343394:G:A	rs61525120	G	A	G	Hoxd9_MA0913.1	13	0	-	0	0	.
chr3	66378377	66378378	chr3:66378378:C:T	rs148174157	C	T	C	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr3	66398890	66398891	chr3:66398891:C:T	rs1041766559	C	T	C	Hoxd9_MA0913.1	1	1	+	7.83890107168488	7.490765443955856	GCGATTAAAT
chr3	66398916	66398917	chr3:66398917:G:A	rs779955894	G	A	G	Hoxd9_MA0913.1	27	0	+	0	0	.
chr3	66483143	66483144	chr3:66483144:C:G	rs6781851	C	G	C	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr3	66483159	66483160	chr3:66483160:T:C	rs6789830	T	C	T	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr3	66618301	66618302	chr3:66618302:C:G	rs2365471	C	G	G	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr3	67034595	67034596	chr3:67034596:C:T	rs72911602	C	T	T	Hoxd9_MA0913.1	0	1	-	8.531537147691377	7.583803424280916	GTCATAAAAA
chr3	67094631	67094632	chr3:67094632:T:C	rs7647065	T	C	T	Hoxd9_MA0913.1	27	0	+	0	0	.
chr3	67112495	67112496	chr3:67112496:T:C	rs35639168	T	C	C	Hoxd9_MA0913.1	21	0	-	0	0	.
chr3	67503498	67503499	chr3:67503499:G:A	rs7429940	G	A	A	Hoxd9_MA0913.1	2	1	+	7.8800714937946905	9.55752993525279	GCGATAAAAT
chr3	67605095	67605096	chr3:67605096:A:C	rs4588377	A	C	C	Hoxd9_MA0913.1	19	0	+	0	0	.
chr3	67736312	67736313	chr3:67736313:C:T	rs1459912	C	T	T	Hoxd9_MA0913.1	20	0	-	0	0	.
chr3	68085017	68085018	chr3:68085018:A:G	rs6781549	A	G	A	Hoxd9_MA0913.1	26	0	+	0	0	.
chr3	68266830	68266831	chr3:68266831:C:G	rs9839008	C	G	G	Hoxd9_MA0913.1	23	0	-	0	0	.
chr3	68989065	68989066	chr3:68989066:A:G	rs4855543	A	G	a	Hoxd9_MA0913.1	18	0	+	0	0	.
chr3	69033721	69033722	chr3:69033722:G:T	rs937858	G	T	T	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr3	69459070	69459071	chr3:69459071:T:C	rs9868115	T	C	C	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr3	69489896	69489897	chr3:69489897:T:C	rs1587371	T	C	C	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr3	69504187	69504188	chr3:69504188:A:T	rs1498851	A	T	T	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr3	69504188	69504189	chr3:69504189:G:A	rs1909349	G	A	A	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr3	69747868	69747869	chr3:69747869:T:A	rs6772383	T	A	T	Hoxd9_MA0913.1	10	0	-	0	0	.
chr3	69872233	69872234	chr3:69872234:G:A	rs9840417	G	A	A	Hoxd9_MA0913.1	24	0	+	0	0	.
chr3	69972747	69972748	chr3:69972748:A:C	rs6549254	A	C	A	Hoxd9_MA0913.1	5	1	+	9.55752993525279	6.122728163883419	GCAATAAAAT
chr3	70065749	70065750	chr3:70065750:C:T	rs73836046	C	T	C	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr3	70267711	70267712	chr3:70267712:A:G	rs6785155	A	G	A	Hoxd9_MA0913.1	25	0	-	0	0	.
chr3	71007137	71007138	chr3:71007138:A:G	rs76387837	A	G	A	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr3	71032684	71032685	chr3:71032685:C:A	rs9861326	C	A	C	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr3	71032713	71032714	chr3:71032714:A:G	rs9880715	A	G	G	Hoxd9_MA0913.1	21	0	+	0	0	.
chr3	71078339	71078340	chr3:71078340:A:T	rs1288973	A	T	A	Hoxd9_MA0913.1	9	1	-	8.287725110553424	8.531537147691377	GTCATAAAAT
chr3	71080562	71080563	chr3:71080563:G:A	rs11711192	G	A	G	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr3	71263365	71263366	chr3:71263366:G:A	rs952814	G	A	G	Hoxd9_MA0913.1	27	0	-	0	0	.
chr3	71279851	71279852	chr3:71279852:G:A	rs1295495	G	A	A	Hoxd9_MA0913.1	29	0	+	0	0	.
chr3	71315401	71315402	chr3:71315402:A:T	rs9790300	A	T	A	Hoxd9_MA0913.1	5	1	+	8.323343304007485	8.282172881897674	CCAATAAAAA
chr3	71371605	71371606	chr3:71371606:C:G	chr3:71371606:C:G	C	G	C	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr3	71425854	71425855	chr3:71425855:T:C	rs60425923	T	C	.	Hoxd9_MA0913.1	9	1	+	8.594690316172638	7.75646393805828	GCCATTAAAT
chr3	71436531	71436532	chr3:71436532:C:T	rs140039959	C	T	.	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr3	71787081	71787082	chr3:71787082:T:A	rs12492397	T	A	T	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr3	71797971	71797972	chr3:71797972:A:G	rs7629632	A	G	A	Hoxd9_MA0913.1	4	1	-	9.412035922551908	6.119901670776928	GTAATTAAAA
chr3	72013257	72013258	chr3:72013258:G:C	rs2036595	G	C	C	Hoxd9_MA0913.1	26	0	+	0	0	.
chr3	72013259	72013260	chr3:72013260:A:G	rs9850131	A	G	A	Hoxd9_MA0913.1	28	0	+	0	0	.
chr3	72237572	72237573	chr3:72237573:G:A	rs34741169	G	A	G	Hoxd9_MA0913.1	15	0	+	0	0	.
chr3	72237749	72237750	chr3:72237750:T:C	rs7432379	T	C	T	Hoxd9_MA0913.1	2	1	-	8.282172881897674	6.604714440439576	CCAATTAAAA
chr3	72289745	72289746	chr3:72289746:A:G	rs73094738	A	G	A	Hoxd9_MA0913.1	15	0	-	0	0	.
chr3	72939218	72939219	chr3:72939219:A:G	rs9854212	A	G	A	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr3	72957615	72957616	chr3:72957616:A:G	rs13083056	A	G	A	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr3	73035124	73035125	chr3:73035125:T:A	rs75352225	T	A	T	Hoxd9_MA0913.1	23	0	+	0	0	.
chr3	73053090	73053091	chr3:73053091:T:C	rs2130902	T	C	C	Hoxd9_MA0913.1	11	0	-	0	0	.
chr3	73325290	73325291	chr3:73325291:T:C	rs4677261	T	C	C	Hoxd9_MA0913.1	4	1	+	8.490366725581566	5.198232473806588	GTCATTAAAA
chr3	73438315	73438316	chr3:73438316:G:A	rs17754369	G	A	G	Hoxd9_MA0913.1	29	0	-	0	0	.
chr3	73457951	73457952	chr3:73457952:T:C	rs11709074	T	C	T	Hoxd9_MA0913.1	3	1	-	8.635860738282448	6.8082417977873435	GCCATAAAAT
chr3	73461857	73461858	chr3:73461858:G:A	rs149873745	G	A	G	Hoxd9_MA0913.1	25	0	-	0	0	.
chr3	73466589	73466590	chr3:73466590:G:A	rs62246080	G	A	A	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr3	73557486	73557487	chr3:73557487:C:T	rs35594519	C	T	C	Hoxd9_MA0913.1	26	0	+	0	0	.
chr3	73565873	73565874	chr3:73565874:A:G	rs966021252	A	G	A	Hoxd9_MA0913.1	27	0	+	0	0	.
chr3	73739912	73739913	chr3:73739913:A:G	rs9878107	A	G	A	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr3	73759079	73759080	chr3:73759080:C:T	rs12638673	C	T	C	Hoxd9_MA0913.1	9	1	+	8.678133135028622	9.51635951314298	GCAATTAAAC
chr3	73787989	73787990	chr3:73787990:T:C	rs17706958	T	C	C	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr3	75285863	75285864	chr3:75285864:T:G	rs147179905	T	G	T	Hoxd9_MA0913.1	16	0	-	0	0	.
chr3	75401227	75401228	chr3:75401228:A:G	rs138865595	A	G	.	Hoxd9_MA0913.1	22	0	+	0	0	.
chr3	75502763	75502764	chr3:75502764:A:G	rs34134151	A	G	.	Hoxd9_MA0913.1	4	1	-	8.323343304007485	5.031209052232505	CCAATAAAAA
chr3	76561770	76561771	chr3:76561771:T:C	rs1434227889	T	C	T	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr3	76561776	76561777	chr3:76561777:C:T	rs116236171	C	T	C	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr3	76880947	76880948	chr3:76880948:C:T	rs62261843	C	T	C	Hoxd9_MA0913.1	13	0	-	0	0	.
chr3	77096808	77096809	chr3:77096809:A:C	rs11710191	A	C	A	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr3	77121954	77121955	chr3:77121955:A:G	rs187257591	A	G	A	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr3	77151013	77151014	chr3:77151014:C:T	rs9864444	C	T	C	Hoxd9_MA0913.1	0	1	+	8.282172881897674	6.723028854328064	CCAATTAAAA
chr3	77256828	77256829	chr3:77256829:G:A	rs41344847	G	A	g	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr3	77257319	77257320	chr3:77257320:T:C	rs2119745	T	C	c	Hoxd9_MA0913.1	24	0	-	0	0	.
chr3	77940543	77940544	chr3:77940544:C:A	rs1480935257	C	A	C	Hoxd9_MA0913.1	27	0	+	0	0	.
chr3	78004719	78004720	chr3:78004720:T:C	rs62256171	T	C	T	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr3	78273719	78273720	chr3:78273720:C:T	rs1398331	C	T	T	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr3	78368817	78368818	chr3:78368818:A:G	rs11915895	A	G	A	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr3	78400034	78400035	chr3:78400035:C:T	rs4680930	C	T	t	Hoxd9_MA0913.1	13	0	+	0	0	.
chr3	78614860	78614861	chr3:78614861:G:T	rs3732661	G	T	G	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr3	79345491	79345492	chr3:79345492:T:C	rs77598556	T	C	T	Hoxd9_MA0913.1	27	0	-	0	0	.
chr3	80212901	80212902	chr3:80212902:A:G	rs72899338	A	G	A	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr3	80212919	80212920	chr3:80212920:G:C	rs17017623	G	C	G	Hoxd9_MA0913.1	0	1	+	9.412035922551908	7.934037254168651	GTAATTAAAA
chr3	81182163	81182164	chr3:81182164:G:T	rs68123494	G	T	G	Hoxd9_MA0913.1	14	0	+	0	0	.
chr3	81190412	81190413	chr3:81190413:A:G	rs13078650	A	G	A	Hoxd9_MA0913.1	1	1	-	9.168223885413955	9.51635951314298	GTAATTAAAT
chr3	81419426	81419427	chr3:81419427:G:T	chr3:81419427:G:T	G	T	G	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr3	81762505	81762506	chr3:81762506:G:A	rs76678358	G	A	G	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr3	82063622	82063623	chr3:82063623:G:C	rs73132394	G	C	G	Hoxd9_MA0913.1	1	1	-	8.678133135028622	5.585568122743908	GCAATTAAAC
chr3	83659917	83659918	chr3:83659918:T:C	chr3:83659918:T:C	T	C	T	Hoxd9_MA0913.1	4	1	+	9.760171550280933	6.468037298505953	GCAATTAAAA
chr3	83844137	83844138	chr3:83844138:G:A	rs149159747	G	A	G	Hoxd9_MA0913.1	0	1	+	9.760171550280933	8.812437826870472	GCAATTAAAA
chr3	84881595	84881596	chr3:84881596:T:C	rs1248821	T	C	C	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr3	85448047	85448048	chr3:85448048:T:C	rs9828679	T	C	T	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr3	85782812	85782813	chr3:85782813:C:G	rs9309991	C	G	C	Hoxd9_MA0913.1	10	0	+	0	0	.
chr3	86176098	86176099	chr3:86176099:G:T	rs1512923	G	T	T	Hoxd9_MA0913.1	11	0	-	0	0	.
chr3	86177196	86177197	chr3:86177197:T:G	rs7625548	T	G	G	Hoxd9_MA0913.1	16	0	+	0	0	.
chr3	86653565	86653566	chr3:86653566:T:C	rs9869426	T	C	C	Hoxd9_MA0913.1	25	0	+	0	0	.
chr3	86800351	86800352	chr3:86800352:G:A	rs1437048	G	A	A	Hoxd9_MA0913.1	19	0	+	0	0	.
chr3	86831930	86831931	chr3:86831931:T:G	rs9683301	T	G	T	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr3	86934811	86934812	chr3:86934812:C:T	rs12496631	C	T	C	Hoxd9_MA0913.1	14	0	+	0	0	.
chr3	87080223	87080224	chr3:87080224:T:C	chr3:87080224:T:C	T	C	T	Hoxd9_MA0913.1	27	0	+	0	0	.
chr3	87225754	87225755	chr3:87225755:T:C	chr3:87225755:T:C	T	C	T	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr3	87229138	87229139	chr3:87229139:A:G	rs3828364	A	G	A	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr3	87596054	87596055	chr3:87596055:A:C	rs183208380	A	C	A	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr3	87600369	87600370	chr3:87600370:G:T	rs4499631	G	T	G	Hoxd9_MA0913.1	17	0	+	0	0	.
chr3	87771958	87771959	chr3:87771959:C:T	rs4362744	C	T	C	Hoxd9_MA0913.1	12	0	+	0	0	.
chr3	88031923	88031924	chr3:88031924:A:G	rs1431155	A	G	G	Hoxd9_MA0913.1	22	0	-	0	0	.
chr3	88032645	88032646	chr3:88032646:A:G	rs9844342	A	G	A	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr3	88059144	88059145	chr3:88059145:T:G	rs146514820	T	G	T	Hoxd9_MA0913.1	4	1	+	8.323343304007485	5.031209052232505	CCAATAAAAA
chr3	88209624	88209625	chr3:88209625:A:C	rs6805957	A	C	A	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr3	88252762	88252763	chr3:88252763:A:G	rs77342271	A	G	A	Hoxd9_MA0913.1	4	1	-	9.168223885413955	5.8760896336389745	GTAATTAAAT
chr3	88462762	88462763	chr3:88462763:G:A	rs4350928	G	A	G	Hoxd9_MA0913.1	28	0	-	0	0	.
chr3	88462763	88462764	chr3:88462764:A:G	rs4552367	A	G	A	Hoxd9_MA0913.1	27	0	-	0	0	.
chr3	88488063	88488064	chr3:88488064:T:C	rs6766760	T	C	T	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr3	88822122	88822123	chr3:88822123:C:T	rs981433	C	T	C	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr3	89099208	89099209	chr3:89099209:C:G	chr3:89099209:C:G	C	G	C	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr3	89117409	89117410	chr3:89117410:C:T	rs6551394	C	T	C	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr3	89270231	89270232	chr3:89270232:G:T	rs34922683	G	T	G	Hoxd9_MA0913.1	16	0	-	0	0	.
chr3	89358412	89358413	chr3:89358413:C:A	rs111565107	C	A	A	Hoxd9_MA0913.1	23	0	+	0	0	.
chr3	90007302	90007303	chr3:90007303:A:G	rs11128080	A	G	G	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr3	90007856	90007857	chr3:90007857:C:T	rs894095791	C	T	C	Hoxd9_MA0913.1	16	0	+	0	0	.
chr3	94168021	94168022	chr3:94168022:C:T	rs74808332	C	T	T	Hoxd9_MA0913.1	19	0	-	0	0	.
chr3	94293939	94293940	chr3:94293940:T:G	rs34300056	T	G	T	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr3	94349903	94349904	chr3:94349904:A:G	rs9853108	A	G	A	Hoxd9_MA0913.1	22	0	+	0	0	.
chr3	94587533	94587534	chr3:94587534:A:T	rs62269492	A	T	A	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr3	94862833	94862834	chr3:94862834:A:T	rs1368197	A	T	A	Hoxd9_MA0913.1	25	0	-	0	0	.
chr3	95138900	95138901	chr3:95138901:T:C	rs3903496	T	C	T	Hoxd9_MA0913.1	18	0	-	0	0	.
chr3	95235990	95235991	chr3:95235991:G:A	rs147437671	G	A	G	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr3	95387718	95387719	chr3:95387719:C:G	rs1516610	C	G	C	Hoxd9_MA0913.1	25	0	-	0	0	.
chr3	95387724	95387725	chr3:95387725:T:G	rs488949	T	G	T	Hoxd9_MA0913.1	19	0	-	0	0	.
chr3	95705136	95705137	chr3:95705137:A:G	rs34047014	A	G	A	Hoxd9_MA0913.1	5	1	-	8.246554688443613	4.852923339184054	GTCATTAAAT
chr3	95815806	95815807	chr3:95815807:C:T	rs36095771	C	T	T	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr3	96023715	96023716	chr3:96023716:T:A	rs35389201	T	A	T	Hoxd9_MA0913.1	26	0	-	0	0	.
chr3	97795373	97795374	chr3:97795374:G:A	rs4857292	G	A	G	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr3	98563510	98563511	chr3:98563511:A:G	rs2316127	A	G	A	Hoxd9_MA0913.1	27	0	-	0	0	.
chr3	98563526	98563527	chr3:98563527:T:A	rs74538103	T	A	T	Hoxd9_MA0913.1	11	0	-	0	0	.
chr3	98785148	98785149	chr3:98785149:T:G	rs73136045	T	G	T	Hoxd9_MA0913.1	11	0	-	0	0	.
chr3	98871930	98871931	chr3:98871931:A:G	rs2439220	A	G	G	Hoxd9_MA0913.1	19	0	-	0	0	.
chr3	98902346	98902347	chr3:98902347:T:G	rs866549153	T	G	T	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr3	98903824	98903825	chr3:98903825:C:T	rs535228246	C	T	C	Hoxd9_MA0913.1	23	0	-	0	0	.
chr3	98978027	98978028	chr3:98978028:G:A	rs71313511	G	A	G	Hoxd9_MA0913.1	10	0	-	0	0	.
chr3	99097503	99097504	chr3:99097504:A:G	rs79430252	A	G	A	Hoxd9_MA0913.1	25	0	+	0	0	.
chr3	99132012	99132013	chr3:99132013:A:G	rs180769123	A	G	A	Hoxd9_MA0913.1	11	0	-	0	0	.
chr3	99173381	99173382	chr3:99173382:A:G	chr3:99173382:A:G	A	G	A	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr3	99579071	99579072	chr3:99579072:C:T	rs7644862	C	T	C	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr3	99846860	99846861	chr3:99846861:A:G	rs115395477	A	G	A	Hoxd9_MA0913.1	29	0	+	0	0	.
chr3	99876866	99876867	chr3:99876867:G:A	rs16841785	G	A	G	Hoxd9_MA0913.1	28	0	+	0	0	.
chr3	100072667	100072668	chr3:100072668:A:G	rs13083461	A	G	A	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr3	100526513	100526514	chr3:100526514:G:A	rs61218849	G	A	G	Hoxd9_MA0913.1	15	0	+	0	0	.
chr3	100865498	100865499	chr3:100865499:C:T	rs77068359	C	T	C	Hoxd9_MA0913.1	11	0	+	0	0	.
chr3	100902838	100902839	chr3:100902839:T:A	rs41273557	T	A	T	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr3	100902839	100902840	chr3:100902840:C:A	rs79265689	C	A	C	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr3	101409924	101409925	chr3:101409925:T:A	rs4683898	T	A	A	Hoxd9_MA0913.1	15	0	+	0	0	.
chr3	101479458	101479459	chr3:101479459:A:C	rs9852096	A	C	-	Hoxd9_MA0913.1	12	0	+	0	0	.
chr3	101837159	101837160	chr3:101837160:G:A	rs991113486	G	A	G	Hoxd9_MA0913.1	24	0	+	0	0	.
chr3	101860030	101860031	chr3:101860031:G:A	rs79017524	G	A	G	Hoxd9_MA0913.1	10	0	-	0	0	.
chr3	101867298	101867299	chr3:101867299:C:T	rs665374	C	T	C	Hoxd9_MA0913.1	0	1	-	9.453206344661718	8.505472621251258	GTAATAAAAA
chr3	101984356	101984357	chr3:101984357:C:T	rs9811747	C	T	C	Hoxd9_MA0913.1	16	0	+	0	0	.
chr3	102005876	102005877	chr3:102005877:T:C	rs1707581	T	C	T	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr3	102476649	102476650	chr3:102476650:G:A	rs74782058	G	A	G	Hoxd9_MA0913.1	18	0	+	0	0	.
chr3	102569971	102569972	chr3:102569972:G:A	rs116476293	G	A	G	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr3	102752441	102752442	chr3:102752442:T:C	rs190569912	T	C	T	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr3	102827029	102827030	chr3:102827030:T:C	rs75890462	T	C	T	Hoxd9_MA0913.1	21	0	-	0	0	.
chr3	102827046	102827047	chr3:102827047:A:G	rs969308	A	G	A	Hoxd9_MA0913.1	4	1	-	8.635860738282448	5.343726486507468	GCCATAAAAT
chr3	102936843	102936844	chr3:102936844:G:T	rs9876189	G	T	T	Hoxd9_MA0913.1	9	1	-	8.371167929409406	9.453206344661718	GTAATAAAAC
chr3	103492480	103492481	chr3:103492481:T:C	rs4536836	T	C	G	Hoxd9_MA0913.1	13	0	-	0	0	.
chr3	103537437	103537438	chr3:103537438:T:C	rs7639354	T	C	C	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr3	104245850	104245851	chr3:104245851:C:T	rs62259479	C	T	C	Hoxd9_MA0913.1	2	1	-	8.082713108822833	9.760171550280933	GCGATTAAAA
chr3	104263108	104263109	chr3:104263109:T:G	rs12497491	T	G	G	Hoxd9_MA0913.1	15	0	-	0	0	.
chr3	104291644	104291645	chr3:104291645:G:A	rs10933771	G	A	G	Hoxd9_MA0913.1	1	1	-	8.282172881897674	7.934037254168651	CCAATTAAAA
chr3	104516174	104516175	chr3:104516175:A:G	rs7429504	A	G	G	Hoxd9_MA0913.1	12	0	-	0	0	.
chr3	104598884	104598885	chr3:104598885:A:G	rs4450851	A	G	A	Hoxd9_MA0913.1	9	1	-	8.246554688443613	7.408328310329255	GTCATTAAAT
chr3	104874699	104874700	chr3:104874700:T:C	rs55777556	T	C	C	Hoxd9_MA0913.1	10	0	+	0	0	.
chr3	105043670	105043671	chr3:105043671:C:T	rs66833862	C	T	T	Hoxd9_MA0913.1	24	0	-	0	0	.
chr3	105043671	105043672	chr3:105043672:C:G	rs7612173	C	G	G	Hoxd9_MA0913.1	23	0	-	0	0	.
chr3	105256840	105256841	chr3:105256841:T:G	rs62260731	T	G	G	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr3	105616742	105616743	chr3:105616743:C:G	rs7615659	C	G	C	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr3	105691632	105691633	chr3:105691633:G:A	rs3821490	G	A	G	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr3	105730157	105730158	chr3:105730158:T:A	rs1372982	T	A	T	Hoxd9_MA0913.1	4	1	+	8.123883530932645	5.4366321067464884	GCGATAAAAA
chr3	105752844	105752845	chr3:105752845:T:C	rs12054270	T	C	T	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr3	105774021	105774022	chr3:105774022:T:C	rs79547724	T	C	T	Hoxd9_MA0913.1	14	0	-	0	0	.
chr3	105938259	105938260	chr3:105938260:G:A	rs905344362	G	A	G	Hoxd9_MA0913.1	15	0	-	0	0	.
chr3	106103540	106103541	chr3:106103541:T:C	rs142690806	T	C	T	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr3	106206916	106206917	chr3:106206917:A:C	rs79254098	A	C	A	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr3	106381258	106381259	chr3:106381259:C:T	rs12494362	C	T	T	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr3	106424173	106424174	chr3:106424174:A:G	rs4524308	A	G	G	Hoxd9_MA0913.1	5	1	+	8.853608248980283	2.631945096084414	ACAATAAAAA
chr3	106424197	106424198	chr3:106424198:C:T	rs73856696	C	T	C	Hoxd9_MA0913.1	29	0	+	0	0	.
chr3	106560532	106560533	chr3:106560533:C:G	rs116490071	C	G	C	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr3	106778289	106778290	chr3:106778290:C:T	rs72931593	C	T	C	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr3	106986775	106986776	chr3:106986776:T:C	rs12639160	T	C	T	Hoxd9_MA0913.1	21	0	-	0	0	.
chr3	106996750	106996751	chr3:106996751:A:G	rs1399735	A	G	G	Hoxd9_MA0913.1	22	0	-	0	0	.
chr3	107001486	107001487	chr3:107001487:C:A	rs2203469	C	A	C	Hoxd9_MA0913.1	29	0	-	0	0	.
chr3	107001487	107001488	chr3:107001488:G:A	rs2203470	G	A	G	Hoxd9_MA0913.1	28	0	-	0	0	.
chr3	107310820	107310821	chr3:107310821:C:T	rs4855744	C	T	C	Hoxd9_MA0913.1	15	0	-	0	0	.
chr3	107600894	107600895	chr3:107600895:A:G	rs142428125	A	G	A	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr3	107982200	107982201	chr3:107982201:A:T	rs709487	A	T	A	Hoxd9_MA0913.1	10	0	-	0	0	.
chr3	108252173	108252174	chr3:108252174:T:C	rs7622810	T	C	T	Hoxd9_MA0913.1	26	0	-	0	0	.
chr3	108343081	108343082	chr3:108343082:C:G	rs9810815	C	G	G	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr3	108351708	108351709	chr3:108351709:T:C	rs9846218	T	C	C	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr3	109824802	109824803	chr3:109824803:C:G	rs9814287	C	G	C	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr3	109985309	109985310	chr3:109985310:A:G	rs62283145	A	G	A	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr3	110164683	110164684	chr3:110164684:A:G	rs6414243	A	G	G	Hoxd9_MA0913.1	4	1	-	8.853608248980283	5.561473997205303	ACAATAAAAA
chr3	110436494	110436495	chr3:110436495:A:G	rs67334734	A	G	A	Hoxd9_MA0913.1	4	1	-	9.760171550280933	6.468037298505953	GCAATTAAAA
chr3	111222014	111222015	chr3:111222015:G:A	rs6801425	G	A	A	Hoxd9_MA0913.1	13	0	-	0	0	.
chr3	111329502	111329503	chr3:111329503:T:C	rs7634000	T	C	T	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr3	111526300	111526301	chr3:111526301:C:T	rs140822639	C	T	c	Hoxd9_MA0913.1	0	1	-	8.490366725581566	7.542633002171106	GTCATTAAAA
chr3	111782337	111782338	chr3:111782338:G:C	rs3922704	G	C	G	Hoxd9_MA0913.1	24	0	+	0	0	.
chr3	111887484	111887485	chr3:111887485:A:G	rs13064071	A	G	A	Hoxd9_MA0913.1	25	0	+	0	0	.
chr3	111917648	111917649	chr3:111917649:A:G	rs6438021	A	G	G	Hoxd9_MA0913.1	9	1	+	8.812437826870472	7.34594448610098	ACAATTAAAA
chr3	111957469	111957470	chr3:111957470:C:G	rs493456	C	G	C	Hoxd9_MA0913.1	21	0	-	0	0	.
chr3	112135349	112135350	chr3:112135350:G:A	rs1948404	G	A	G	Hoxd9_MA0913.1	18	0	-	0	0	.
chr3	112298164	112298165	chr3:112298165:G:A	rs4682397	G	A	A	Hoxd9_MA0913.1	16	0	+	0	0	.
chr3	112378996	112378997	chr3:112378997:C:A	rs1906520	C	A	C	Hoxd9_MA0913.1	16	0	+	0	0	.
chr3	112409295	112409296	chr3:112409296:T:C	rs1872987	T	C	c	Hoxd9_MA0913.1	12	0	+	0	0	.
chr3	112748459	112748460	chr3:112748460:A:G	rs1387020	A	G	A	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr3	112780145	112780146	chr3:112780146:G:T	rs6770927	G	T	C	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr3	112798907	112798908	chr3:112798908:T:C	rs6793183	T	C	C	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr3	113110409	113110410	chr3:113110410:A:G	rs13071497	A	G	A	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr3	113234782	113234783	chr3:113234783:G:A	rs2201971	G	A	G	Hoxd9_MA0913.1	10	0	-	0	0	.
chr3	113261635	113261636	chr3:113261636:G:A	rs999367	G	A	A	Hoxd9_MA0913.1	13	0	-	0	0	.
chr3	113278877	113278878	chr3:113278878:T:G	rs13066489	T	G	T	Hoxd9_MA0913.1	16	0	-	0	0	.
chr3	113428370	113428371	chr3:113428371:G:A	rs11715198	G	A	G	Hoxd9_MA0913.1	16	0	+	0	0	.
chr3	113532619	113532620	chr3:113532620:T:G	chr3:113532620:T:G	T	G	T	Hoxd9_MA0913.1	16	0	-	0	0	.
chr3	113668869	113668870	chr3:113668870:T:C	rs12630791	T	C	C	Hoxd9_MA0913.1	29	0	+	0	0	.
chr3	113854589	113854590	chr3:113854590:A:G	rs7646432	A	G	A	Hoxd9_MA0913.1	27	0	+	0	0	.
chr3	113933926	113933927	chr3:113933927:A:G	rs9865782	A	G	A	Hoxd9_MA0913.1	27	0	-	0	0	.
chr3	114216524	114216525	chr3:114216525:A:G	rs145625496	A	G	A	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr3	115015000	115015001	chr3:115015001:C:T	rs111480044	C	T	C	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr3	115623819	115623820	chr3:115623820:G:A	rs905567247	G	A	A	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr3	116529036	116529037	chr3:116529037:C:T	rs9834065	C	T	T	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr3	117036436	117036437	chr3:117036437:C:T	rs11927212	C	T	C	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr3	117055656	117055657	chr3:117055657:A:G	rs74363313	A	G	A	Hoxd9_MA0913.1	14	0	-	0	0	.
chr3	117216896	117216897	chr3:117216897:T:G	rs2903971	T	G	G	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr3	117248591	117248592	chr3:117248592:A:G	rs11717629	A	G	A	Hoxd9_MA0913.1	14	0	-	0	0	.
chr3	117281688	117281689	chr3:117281689:T:G	rs140234215	T	G	T	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr3	117417446	117417447	chr3:117417447:A:G	rs17718542	A	G	A	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr3	117428034	117428035	chr3:117428035:T:C	rs4073041	T	C	T	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr3	117873131	117873132	chr3:117873132:G:A	rs78048644	G	A	G	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr3	118165574	118165575	chr3:118165575:A:T	rs34967527	A	T	A	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr3	118534621	118534622	chr3:118534622:G:A	rs6807699	G	A	A	Hoxd9_MA0913.1	25	0	-	0	0	.
chr3	118575677	118575678	chr3:118575678:T:C	rs6791712	T	C	T	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr3	118926270	118926271	chr3:118926271:A:G	rs9848979	A	G	G	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr3	119203460	119203461	chr3:119203461:T:G	rs13078534	T	G	T	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr3	119232187	119232188	chr3:119232188:A:G	rs75653715	A	G	G	Hoxd9_MA0913.1	11	0	+	0	0	.
chr3	119774742	119774743	chr3:119774743:G:A	rs4688035	G	A	A	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr3	119783931	119783932	chr3:119783932:G:A	rs78171547	G	A	G	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr3	119804104	119804105	chr3:119804105:C:G	rs150383333	C	G	C	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr3	120037390	120037391	chr3:120037391:A:T	rs115327285	A	T	A	Hoxd9_MA0913.1	16	0	+	0	0	.
chr3	120388955	120388956	chr3:120388956:C:G	rs2702157	C	G	g	Hoxd9_MA0913.1	27	0	-	0	0	.
chr3	120421194	120421195	chr3:120421195:C:A	rs36068602	C	A	C	Hoxd9_MA0913.1	25	0	+	0	0	.
chr3	120433202	120433203	chr3:120433203:C:G	rs1733299	C	G	G	Hoxd9_MA0913.1	1	1	+	8.853608248980283	5.761043236695571	ACAATAAAAA
chr3	120524528	120524529	chr3:120524529:T:C	rs77516944	T	C	T	Hoxd9_MA0913.1	11	0	+	0	0	.
chr3	120795296	120795297	chr3:120795297:C:T	rs144043875	C	T	C	Hoxd9_MA0913.1	29	0	+	0	0	.
chr3	120805321	120805322	chr3:120805322:A:G	rs401385	A	G	A	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr3	121527837	121527838	chr3:121527838:T:C	rs11717597	T	C	T	Hoxd9_MA0913.1	29	0	-	0	0	.
chr3	121825393	121825394	chr3:121825394:T:C	rs79488379	T	C	T	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr3	121942570	121942571	chr3:121942571:A:G	rs1920312	A	G	G	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr3	121996584	121996585	chr3:121996585:T:C	rs2332035	T	C	C	Hoxd9_MA0913.1	23	0	+	0	0	.
chr3	122309628	122309629	chr3:122309629:G:T	rs73186044	G	T	G	Hoxd9_MA0913.1	15	0	-	0	0	.
chr3	122517600	122517601	chr3:122517601:G:C	rs55776828	G	C	G	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr3	122652211	122652212	chr3:122652212:C:T	rs10934608	C	T	C	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr3	122825279	122825280	chr3:122825280:C:T	rs16833564	C	T	C	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr3	122934537	122934538	chr3:122934538:G:A	rs79572837	G	A	G	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr3	122945117	122945118	chr3:122945118:T:C	rs1367785	T	C	C	Hoxd9_MA0913.1	8	1	-	7.83890107168488	6.265932494226938	GCGATTAAAT
chr3	122977777	122977778	chr3:122977778:T:C	rs73856783	T	C	T	Hoxd9_MA0913.1	16	0	+	0	0	.
chr3	123035125	123035126	chr3:123035126:T:C	rs1123613	T	C	C	Hoxd9_MA0913.1	8	1	+	8.32301137036169	7.801678332738202	GCAATAAATA
chr3	123190167	123190168	chr3:123190168:G:T	rs13097154	G	T	G	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr3	123387439	123387440	chr3:123387440:T:A	rs6764842	T	A	T	Hoxd9_MA0913.1	19	0	-	0	0	.
chr3	123387804	123387805	chr3:123387805:T:C	rs10451896	T	C	C	Hoxd9_MA0913.1	25	0	+	0	0	.
chr3	123415677	123415678	chr3:123415678:G:A	rs999002493	G	A	G	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr3	123499297	123499298	chr3:123499298:C:T	rs73857648	C	T	T	Hoxd9_MA0913.1	17	0	-	0	0	.
chr3	123540632	123540633	chr3:123540633:G:T	rs9850684	G	T	T	Hoxd9_MA0913.1	27	0	-	0	0	.
chr3	123582394	123582395	chr3:123582395:C:G	rs820469	C	G	G	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr3	123766074	123766075	chr3:123766075:T:C	rs112281991	T	C	t	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr3	124134480	124134481	chr3:124134481:C:T	rs112605596	C	T	C	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr3	124427624	124427625	chr3:124427625:A:C	rs1445626	A	C	C	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr3	125043824	125043825	chr3:125043825:G:A	rs112623644	G	A	G	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr3	125070646	125070647	chr3:125070647:A:T	rs2948824	A	T	A	Hoxd9_MA0913.1	13	0	+	0	0	.
chr3	125169164	125169165	chr3:125169165:T:C	rs1767087	T	C	T	Hoxd9_MA0913.1	12	0	+	0	0	.
chr3	125191594	125191595	chr3:125191595:A:C	rs1464065	A	C	A	Hoxd9_MA0913.1	19	0	+	0	0	.
chr3	125300673	125300674	chr3:125300674:T:C	rs149623343	T	C	T	Hoxd9_MA0913.1	15	0	-	0	0	.
chr3	125309804	125309805	chr3:125309805:C:T	rs4679382	C	T	T	Hoxd9_MA0913.1	12	0	+	0	0	.
chr3	125961721	125961722	chr3:125961722:C:T	rs1875686	C	T	T	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr3	125961724	125961725	chr3:125961725:T:C	rs1875685	T	C	C	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr3	126012287	126012288	chr3:126012288:C:T	rs12491577	C	T	C	Hoxd9_MA0913.1	25	0	-	0	0	.
chr3	126012317	126012318	chr3:126012318:C:T	rs1566715	C	T	T	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr3	126151954	126151955	chr3:126151955:A:G	rs4646717	A	G	G	Hoxd9_MA0913.1	4	1	-	7.943390935685037	4.651256683910057	GCAATTAAGT
chr3	126283676	126283677	chr3:126283677:G:A	rs34150227	G	A	G	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr3	126497306	126497307	chr3:126497307:C:G	rs17691504	C	G	C	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr3	126497340	126497341	chr3:126497341:T:C	rs10512665	T	C	T	Hoxd9_MA0913.1	15	0	+	0	0	.
chr3	126497351	126497352	chr3:126497352:C:T	rs115957934	C	T	C	Hoxd9_MA0913.1	26	0	+	0	0	.
chr3	126512042	126512043	chr3:126512043:C:T	rs777487	C	T	C	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr3	126716915	126716916	chr3:126716916:T:C	rs9847751	T	C	C	Hoxd9_MA0913.1	29	0	-	0	0	.
chr3	126817207	126817208	chr3:126817208:G:A	rs7626935	G	A	G	Hoxd9_MA0913.1	24	0	-	0	0	.
chr3	127059240	127059241	chr3:127059241:C:T	rs77601110	C	T	C	Hoxd9_MA0913.1	29	0	-	0	0	.
chr3	127113145	127113146	chr3:127113146:G:A	rs1482924	G	A	G	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr3	127324851	127324852	chr3:127324852:G:A	rs2002037	G	A	-	Hoxd9_MA0913.1	15	0	+	0	0	.
chr3	127394468	127394469	chr3:127394469:G:A	rs4679157	G	A	G	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr3	127425182	127425183	chr3:127425183:C:G	rs73196826	C	G	C	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr3	127425187	127425188	chr3:127425188:A:T	rs10934814	A	T	A	Hoxd9_MA0913.1	3	1	+	7.7976343601680895	4.183294491039106	GCCATAAAAC
chr3	127457747	127457748	chr3:127457748:A:G	rs77826798	A	G	a	Hoxd9_MA0913.1	6	1	+	8.323343304007485	1.5079226362281446	CCAATAAAAA
chr3	127552174	127552175	chr3:127552175:A:C	rs72965719	A	C	A	Hoxd9_MA0913.1	10	0	-	0	0	.
chr3	127698024	127698025	chr3:127698025:G:A	rs140935411	G	A	G	Hoxd9_MA0913.1	25	0	-	0	0	.
chr3	127788482	127788483	chr3:127788483:C:T	rs115085301	C	T	C	Hoxd9_MA0913.1	25	0	+	0	0	.
chr3	127803288	127803289	chr3:127803289:G:A	rs16835913	G	A	G	Hoxd9_MA0913.1	12	0	-	0	0	.
chr3	127843230	127843231	chr3:127843231:A:G	rs36067954	A	G	A	Hoxd9_MA0913.1	18	0	+	0	0	.
chr3	127914699	127914700	chr3:127914700:G:A	rs13073655	G	A	G	Hoxd9_MA0913.1	26	0	-	0	0	.
chr3	127914732	127914733	chr3:127914733:C:G	rs113042266	C	G	C	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr3	127997741	127997742	chr3:127997742:A:G	rs9870753	A	G	G	Hoxd9_MA0913.1	17	0	+	0	0	.
chr3	128394468	128394469	chr3:128394469:A:G	rs78278710	A	G	A	Hoxd9_MA0913.1	12	0	+	0	0	.
chr3	129346467	129346468	chr3:129346468:A:G	rs11923574	A	G	A	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr3	129471157	129471158	chr3:129471158:G:T	rs6439183	G	T	T	Hoxd9_MA0913.1	1	1	-	8.293678209511443	5.873859833486182	GCAATTAAAG
chr3	129553852	129553853	chr3:129553853:G:C	rs61493596	G	C	G	Hoxd9_MA0913.1	19	0	-	0	0	.
chr3	129634198	129634199	chr3:129634199:A:G	rs149249614	A	G	A	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr3	129645080	129645081	chr3:129645081:C:T	rs78899835	C	T	C	Hoxd9_MA0913.1	29	0	+	0	0	.
chr3	129690637	129690638	chr3:129690638:G:A	rs2403524	G	A	G	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr3	129987548	129987549	chr3:129987549:G:A	rs6791923	G	A	g	Hoxd9_MA0913.1	27	0	-	0	0	.
chr3	130179404	130179405	chr3:130179405:C:T	rs2624616	C	T	c	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr3	130360507	130360508	chr3:130360508:C:T	rs78308067	C	T	C	Hoxd9_MA0913.1	26	0	-	0	0	.
chr3	130905644	130905645	chr3:130905645:G:T	rs150480740	G	T	G	Hoxd9_MA0913.1	13	0	+	0	0	.
chr3	131449109	131449110	chr3:131449110:T:G	rs4854624	T	G	T	Hoxd9_MA0913.1	18	0	+	0	0	.
chr3	131474235	131474236	chr3:131474236:C:T	rs9289388	C	T	T	Hoxd9_MA0913.1	25	0	+	0	0	.
chr3	131591747	131591748	chr3:131591748:C:A	rs73874151	C	A	A	Hoxd9_MA0913.1	1	1	+	8.323343304007485	5.903524927982227	CCAATAAAAA
chr3	131713885	131713886	chr3:131713886:A:C	rs9823608	A	C	C	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr3	131974065	131974066	chr3:131974066:T:G	rs114999403	T	G	T	Hoxd9_MA0913.1	4	1	+	8.490366725581566	5.198232473806588	GTCATTAAAA
chr3	132229195	132229196	chr3:132229196:C:A	rs73211958	C	A	A	Hoxd9_MA0913.1	21	0	-	0	0	.
chr3	132229198	132229199	chr3:132229199:T:C	rs16838951	T	C	T	Hoxd9_MA0913.1	18	0	-	0	0	.
chr3	132352692	132352693	chr3:132352693:C:A	rs73003109	C	A	C	Hoxd9_MA0913.1	1	1	+	7.8800714937946905	5.460253117769432	GCGATAAAAT
chr3	132354480	132354481	chr3:132354481:G:A	rs62291051	G	A	A	Hoxd9_MA0913.1	21	0	-	0	0	.
chr3	132569652	132569653	chr3:132569653:C:A	rs76651220	C	A	C	Hoxd9_MA0913.1	18	0	+	0	0	.
chr3	132706084	132706085	chr3:132706085:C:T	rs9842176	C	T	C	Hoxd9_MA0913.1	25	0	+	0	0	.
chr3	132879468	132879469	chr3:132879469:A:G	rs74922154	A	G	A	Hoxd9_MA0913.1	8	1	+	7.7976343601680895	6.224665782710147	GCCATAAAAC
chr3	132928203	132928204	chr3:132928204:T:A	rs58724908	T	A	T	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr3	133492044	133492045	chr3:133492045:T:C	rs6439412	T	C	C	Hoxd9_MA0913.1	13	0	+	0	0	.
chr3	133533898	133533899	chr3:133533899:C:T	rs12108081	C	T	T	Hoxd9_MA0913.1	18	0	-	0	0	.
chr3	133731875	133731876	chr3:133731876:C:T	rs6787177	C	T	C	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr3	134325771	134325772	chr3:134325772:C:A	rs34006849	C	A	C	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr3	134377037	134377038	chr3:134377038:A:G	rs144924397	A	G	A	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr3	134675857	134675858	chr3:134675858:C:T	rs12634744	C	T	C	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr3	134848611	134848612	chr3:134848612:C:G	rs2292659	C	G	C	Hoxd9_MA0913.1	10	0	-	0	0	.
chr3	134980026	134980027	chr3:134980027:T:C	rs6776069	T	C	T	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr3	134986362	134986363	chr3:134986363:G:A	rs36100	G	A	G	Hoxd9_MA0913.1	27	0	-	0	0	.
chr3	134991269	134991270	chr3:134991270:A:G	rs36096	A	G	A	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr3	135017357	135017358	chr3:135017358:A:T	rs113711968	A	T	T	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr3	136543521	136543522	chr3:136543522:T:C	rs9289511	T	C	T	Hoxd9_MA0913.1	26	0	+	0	0	.
chr3	136820846	136820847	chr3:136820847:T:C	rs9682783	T	C	C	Hoxd9_MA0913.1	15	0	+	0	0	.
chr3	136820856	136820857	chr3:136820857:C:A	rs9682106	C	A	A	Hoxd9_MA0913.1	25	0	+	0	0	.
chr3	136920132	136920133	chr3:136920133:A:G	rs9879531	A	G	A	Hoxd9_MA0913.1	4	1	-	8.282172881897674	4.9900386301226956	CCAATTAAAA
chr3	137403897	137403898	chr3:137403898:G:A	rs13092287	G	A	A	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr3	137477535	137477536	chr3:137477536:T:C	rs12490219	T	C	T	Hoxd9_MA0913.1	6	1	-	9.412035922551908	2.5966152547725674	GTAATTAAAA
chr3	138469129	138469130	chr3:138469130:G:A	rs116778817	G	A	G	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr3	138546041	138546042	chr3:138546042:T:G	rs141181937	T	G	T	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr3	138594050	138594051	chr3:138594051:G:A	rs116068626	G	A	G	Hoxd9_MA0913.1	12	0	-	0	0	.
chr3	138594052	138594053	chr3:138594053:T:G	rs115925482	T	G	T	Hoxd9_MA0913.1	10	0	-	0	0	.
chr3	138830166	138830167	chr3:138830167:A:G	rs2881900	A	G	G	Hoxd9_MA0913.1	14	0	+	0	0	.
chr3	138877207	138877208	chr3:138877208:A:G	rs13080973	A	G	A	Hoxd9_MA0913.1	17	0	-	0	0	.
chr3	139447587	139447588	chr3:139447588:A:G	rs113670006	A	G	A	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr3	140153315	140153316	chr3:140153316:C:T	rs139093732	C	T	c	Hoxd9_MA0913.1	27	0	+	0	0	.
chr3	140770529	140770530	chr3:140770530:A:C	rs59766361	A	C	A	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr3	140913018	140913019	chr3:140913019:T:G	rs7624649	T	G	c	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr3	140984899	140984900	chr3:140984900:A:C	rs57526660	A	C	C	Hoxd9_MA0913.1	15	0	+	0	0	.
chr3	141280115	141280116	chr3:141280116:G:C	rs57758275	G	C	G	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr3	141280141	141280142	chr3:141280142:G:A	rs75805757	G	A	G	Hoxd9_MA0913.1	14	0	+	0	0	.
chr3	141294774	141294775	chr3:141294775:A:T	rs6439996	A	T	T	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr3	141312545	141312546	chr3:141312546:T:G	rs934023491	T	G	T	Hoxd9_MA0913.1	7	1	-	8.879672775420401	5.585826023701971	GCCATAAAAA
chr3	141312571	141312572	chr3:141312572:A:G	rs72632315	A	G	A	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr3	141698263	141698264	chr3:141698264:G:A	rs4683624	G	A	G	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr3	141739880	141739881	chr3:141739881:A:G	rs1879285	A	G	A	Hoxd9_MA0913.1	18	0	+	0	0	.
chr3	141739887	141739888	chr3:141739888:T:C	rs1879284	T	C	T	Hoxd9_MA0913.1	25	0	+	0	0	.
chr3	142068133	142068134	chr3:142068134:G:C	rs115460306	G	C	G	Hoxd9_MA0913.1	14	0	+	0	0	.
chr3	142113657	142113658	chr3:142113658:A:C	rs73233890	A	C	A	Hoxd9_MA0913.1	6	1	+	8.490366725581566	4.015789862913362	GTCATTAAAA
chr3	142126319	142126320	chr3:142126320:A:G	rs75568231	A	G	A	Hoxd9_MA0913.1	19	0	-	0	0	.
chr3	142495469	142495470	chr3:142495470:C:T	rs7431811	C	T	C	Hoxd9_MA0913.1	27	0	+	0	0	.
chr3	142597193	142597194	chr3:142597194:A:G	rs6440093	A	G	G	Hoxd9_MA0913.1	16	0	-	0	0	.
chr3	142597600	142597601	chr3:142597601:C:T	rs6440094	C	T	T	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr3	142613792	142613793	chr3:142613793:C:G	rs28709617	C	G	C	Hoxd9_MA0913.1	0	1	-	8.334848631621252	6.856849963237993	GCAATAAAAG
chr3	142896990	142896991	chr3:142896991:A:G	rs77195961	A	G	A	Hoxd9_MA0913.1	3	1	+	8.282172881897674	6.454553941402571	CCAATTAAAA
chr3	143143156	143143157	chr3:143143157:T:C	rs531148315	T	C	T	Hoxd9_MA0913.1	28	0	-	0	0	.
chr3	143172920	143172921	chr3:143172921:C:T	rs17572766	C	T	C	Hoxd9_MA0913.1	17	0	+	0	0	.
chr3	143172921	143172922	chr3:143172922:G:A	rs554203348	G	A	G	Hoxd9_MA0913.1	18	0	+	0	0	.
chr3	143511427	143511428	chr3:143511428:C:T	rs114079075	C	T	C	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr3	143704078	143704079	chr3:143704079:A:G	rs11928446	A	G	A	Hoxd9_MA0913.1	2	1	+	9.209394307523764	7.531935866065666	GTAATAAAAT
chr3	143911015	143911016	chr3:143911016:T:A	rs114737953	T	A	T	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr3	143951288	143951289	chr3:143951289:A:G	rs1466941	A	G	A	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr3	143977318	143977319	chr3:143977319:G:T	rs11720540	G	T	G	Hoxd9_MA0913.1	10	0	-	0	0	.
chr3	144601062	144601063	chr3:144601063:T:C	rs17282884	T	C	T	Hoxd9_MA0913.1	21	0	-	0	0	.
chr3	144630204	144630205	chr3:144630205:G:A	rs708479	G	A	A	Hoxd9_MA0913.1	0	1	+	7.7976343601680895	6.84990063675763	GCCATAAAAC
chr3	144875422	144875423	chr3:144875423:A:C	rs79891650	A	C	A	Hoxd9_MA0913.1	18	0	-	0	0	.
chr3	145011429	145011430	chr3:145011430:T:C	rs73871968	T	C	T	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr3	145259318	145259319	chr3:145259319:C:T	rs62274777	C	T	C	Hoxd9_MA0913.1	25	0	-	0	0	.
chr3	145698410	145698411	chr3:145698411:T:C	chr3:145698411:T:C	T	C	T	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr3	145762117	145762118	chr3:145762118:C:T	rs17615724	C	T	C	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr3	145771029	145771030	chr3:145771030:T:G	rs112956163	T	G	G	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr3	145937120	145937121	chr3:145937121:G:A	rs113026495	G	A	G	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr3	145981315	145981316	chr3:145981316:A:G	rs35337132	A	G	A	Hoxd9_MA0913.1	26	0	-	0	0	.
chr3	146153746	146153747	chr3:146153747:A:G	rs56686359	A	G	A	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr3	146156939	146156940	chr3:146156940:C:T	rs67325724	C	T	C	Hoxd9_MA0913.1	26	0	+	0	0	.
chr3	146506943	146506944	chr3:146506944:A:G	rs79960433	A	G	G	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr3	146528055	146528056	chr3:146528056:T:C	rs2587027	T	C	C	Hoxd9_MA0913.1	24	0	+	0	0	.
chr3	146532609	146532610	chr3:146532610:G:C	rs2688688	G	C	G	Hoxd9_MA0913.1	20	0	+	0	0	.
chr3	146641635	146641636	chr3:146641636:C:A	rs73159129	C	A	A	Hoxd9_MA0913.1	18	0	+	0	0	.
chr3	146697306	146697307	chr3:146697307:A:T	rs76261152	A	T	A	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr3	146778514	146778515	chr3:146778515:G:A	rs16858887	G	A	G	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr3	147401952	147401953	chr3:147401953:C:T	rs75136694	C	T	C	Hoxd9_MA0913.1	1	1	+	8.594690316172638	8.246554688443613	GCCATTAAAT
chr3	147427362	147427363	chr3:147427363:T:G	rs1337539787	T	G	T	Hoxd9_MA0913.1	10	0	+	0	0	.
chr3	147618565	147618566	chr3:147618566:A:G	rs948722469	A	G	A	Hoxd9_MA0913.1	29	0	+	0	0	.
chr3	147633125	147633126	chr3:147633126:G:C	rs78309061	G	C	G	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr3	147730828	147730829	chr3:147730829:A:G	rs73866497	A	G	A	Hoxd9_MA0913.1	4	1	-	8.531537147691377	5.239402895916397	GTCATAAAAA
chr3	148067422	148067423	chr3:148067423:A:C	rs9812195	A	C	C	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr3	148223475	148223476	chr3:148223476:A:G	rs66568012	A	G	G	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr3	148227880	148227881	chr3:148227881:A:G	rs76282928	A	G	A	Hoxd9_MA0913.1	24	0	-	0	0	.
chr3	148642740	148642741	chr3:148642741:C:A	rs16860650	C	A	C	Hoxd9_MA0913.1	1	1	+	8.187202972822991	5.767384596797731	GCAATTAAGA
chr3	148648176	148648177	chr3:148648177:T:C	rs2933253	T	C	C	Hoxd9_MA0913.1	18	0	-	0	0	.
chr3	148884668	148884669	chr3:148884669:C:T	rs3772578	C	T	T	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr3	148968632	148968633	chr3:148968633:C:T	rs189765087	C	T	C	Hoxd9_MA0913.1	0	1	-	7.932552609785828	6.984818886375368	GCAGTTAAAA
chr3	149005482	149005483	chr3:149005483:T:A	rs61586320	T	A	T	Hoxd9_MA0913.1	12	0	-	0	0	.
chr3	149087411	149087412	chr3:149087412:C:T	rs6440583	C	T	C	Hoxd9_MA0913.1	23	0	-	0	0	.
chr3	149152044	149152045	chr3:149152045:G:A	rs13094132	G	A	G	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr3	149371098	149371099	chr3:149371099:A:G	rs114057789	A	G	A	Hoxd9_MA0913.1	27	0	-	0	0	.
chr3	149371137	149371138	chr3:149371138:A:T	rs9847293	A	T	A	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr3	149382509	149382510	chr3:149382510:C:A	rs12490731	C	A	C	Hoxd9_MA0913.1	25	0	-	0	0	.
chr3	149474139	149474140	chr3:149474140:T:C	rs189026240	T	C	T	Hoxd9_MA0913.1	21	0	-	0	0	.
chr3	149585712	149585713	chr3:149585713:G:A	rs56239167	G	A	G	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr3	149673344	149673345	chr3:149673345:G:A	rs4234375	G	A	.	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr3	149814420	149814421	chr3:149814421:A:G	rs3755620	A	G	G	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr3	149908006	149908007	chr3:149908007:T:A	rs9836197	T	A	A	Hoxd9_MA0913.1	27	0	-	0	0	.
chr3	150106880	150106881	chr3:150106881:T:C	rs190458270	T	C	T	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr3	150271428	150271429	chr3:150271429:A:G	rs999977094	A	G	A	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr3	150278574	150278575	chr3:150278575:T:C	rs114061366	T	C	T	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr3	150384602	150384603	chr3:150384603:A:G	rs73163688	A	G	A	Hoxd9_MA0913.1	9	1	+	8.853608248980283	7.387114908210791	ACAATAAAAA
chr3	150384614	150384615	chr3:150384615:G:T	rs79288444	G	T	G	Hoxd9_MA0913.1	21	0	+	0	0	.
chr3	150394034	150394035	chr3:150394035:G:A	rs4681615	G	A	A	Hoxd9_MA0913.1	26	0	+	0	0	.
chr3	150520174	150520175	chr3:150520175:T:C	rs9865803	T	C	C	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr3	150521670	150521671	chr3:150521671:C:T	rs4234379	C	T	C	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr3	150521699	150521700	chr3:150521700:C:G	rs116477502	C	G	C	Hoxd9_MA0913.1	10	0	+	0	0	.
chr3	150599166	150599167	chr3:150599167:G:C	rs1915943	G	C	G	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr3	150699837	150699838	chr3:150699838:A:T	chr3:150699838:A:T	A	T	A	Hoxd9_MA0913.1	20	0	+	0	0	.
chr3	151317373	151317374	chr3:151317374:A:G	rs77876805	A	G	A	Hoxd9_MA0913.1	17	0	-	0	0	.
chr3	151499361	151499362	chr3:151499362:C:T	rs12152213	C	T	C	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr3	151503452	151503453	chr3:151503453:G:A	rs4339091	G	A	A	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr3	151503481	151503482	chr3:151503482:A:G	rs4546128	A	G	A	Hoxd9_MA0913.1	12	0	+	0	0	.
chr3	151707308	151707309	chr3:151707309:T:C	rs991866	T	C	C	Hoxd9_MA0913.1	23	0	-	0	0	.
chr3	151845364	151845365	chr3:151845365:C:T	rs73869701	C	T	C	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr3	151864889	151864890	chr3:151864890:T:G	chr3:151864890:T:G	T	G	T	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr3	151902721	151902722	chr3:151902722:C:T	rs56378738	C	T	C	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr3	152000019	152000020	chr3:152000020:G:A	rs34376367	G	A	A	Hoxd9_MA0913.1	3	1	+	7.973723031895638	9.801341972390743	GCAGTAAAAA
chr3	152186022	152186023	chr3:152186023:G:A	rs323609	G	A	G	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr3	152313313	152313314	chr3:152313314:C:T	rs73154162	C	T	C	Hoxd9_MA0913.1	28	0	-	0	0	.
chr3	152313327	152313328	chr3:152313328:T:C	rs77341204	T	C	T	Hoxd9_MA0913.1	14	0	-	0	0	.
chr3	152317847	152317848	chr3:152317848:G:A	rs7610095	G	A	G	Hoxd9_MA0913.1	28	0	-	0	0	.
chr3	152330983	152330984	chr3:152330984:C:T	rs17435013	C	T	C	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr3	152379912	152379913	chr3:152379913:G:A	rs59737186	G	A	G	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr3	152386447	152386448	chr3:152386448:C:T	rs13099394	C	T	C	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr3	152604410	152604411	chr3:152604411:A:C	rs67200979	A	C	C	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr3	152610747	152610748	chr3:152610748:A:C	rs113394716	A	C	A	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr3	152622180	152622181	chr3:152622181:C:T	rs1878434	C	T	T	Hoxd9_MA0913.1	17	0	-	0	0	.
chr3	153439272	153439273	chr3:153439273:T:A	rs62276381	T	A	T	Hoxd9_MA0913.1	29	0	-	0	0	.
chr3	153778919	153778920	chr3:153778920:T:G	rs13318862	T	G	T	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr3	154132076	154132077	chr3:154132077:A:C	rs1727893	A	C	C	Hoxd9_MA0913.1	7	1	+	9.51635951314298	6.2225127614245475	GCAATTAAAT
chr3	154152462	154152463	chr3:154152463:C:T	rs2044757	C	T	C	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr3	154193205	154193206	chr3:154193206:C:T	rs400529	C	T	C	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr3	155072291	155072292	chr3:155072292:G:A	rs16824540	G	A	G	Hoxd9_MA0913.1	10	0	-	0	0	.
chr3	155342210	155342211	chr3:155342211:C:A	rs1018912821	C	A	C	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr3	155703703	155703704	chr3:155703704:A:G	rs768754594	A	G	A	Hoxd9_MA0913.1	28	0	+	0	0	.
chr3	155934241	155934242	chr3:155934242:A:G	rs3772115	A	G	A	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr3	156011132	156011133	chr3:156011133:G:A	rs819873	G	A	G	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr3	156075109	156075110	chr3:156075110:T:C	rs140856528	T	C	C	Hoxd9_MA0913.1	10	0	+	0	0	.
chr3	156140254	156140255	chr3:156140255:G:A	rs6441035	G	A	G	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr3	156371849	156371850	chr3:156371850:A:G	rs147244882	A	G	A	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr3	156371856	156371857	chr3:156371857:C:T	chr3:156371857:C:T	C	T	C	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr3	156384148	156384149	chr3:156384149:C:T	rs3821417	C	T	C	Hoxd9_MA0913.1	15	0	+	0	0	.
chr3	156975805	156975806	chr3:156975806:T:G	rs2321455	T	G	G	Hoxd9_MA0913.1	5	1	-	8.853608248980283	5.418806477610913	ACAATAAAAA
chr3	156975818	156975819	chr3:156975819:G:T	rs55726754	G	T	G	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr3	157104716	157104717	chr3:157104717:C:T	rs11928575	C	T	C	Hoxd9_MA0913.1	10	0	+	0	0	.
chr3	157445931	157445932	chr3:157445932:C:T	rs55850097	C	T	c	Hoxd9_MA0913.1	21	0	-	0	0	.
chr3	157574787	157574788	chr3:157574788:A:G	rs1006400119	A	G	A	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr3	157618222	157618223	chr3:157618223:G:A	rs1499788	G	A	G	Hoxd9_MA0913.1	0	1	+	8.490366725581566	7.542633002171106	GTCATTAAAA
chr3	157832711	157832712	chr3:157832712:G:A	rs76733055	G	A	G	Hoxd9_MA0913.1	17	0	-	0	0	.
chr3	157845105	157845106	chr3:157845106:G:A	rs143350979	G	A	G	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr3	157978467	157978468	chr3:157978468:T:A	rs9863442	T	A	T	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr3	158106119	158106120	chr3:158106120:T:C	rs75077515	T	C	T	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr3	158351407	158351408	chr3:158351408:C:G	rs827134	C	G	C	Hoxd9_MA0913.1	1	1	+	8.32301137036169	5.230446358076978	GCAATAAATA
chr3	158598853	158598854	chr3:158598854:A:G	rs12106885	A	G	A	Hoxd9_MA0913.1	1	1	-	9.209394307523764	9.55752993525279	GTAATAAAAT
chr3	158845931	158845932	chr3:158845932:C:A	chr3:158845932:C:A	C	A	C	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr3	158876303	158876304	chr3:158876304:G:C	rs13099040	G	C	G	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr3	158907315	158907316	chr3:158907316:T:C	rs12492743	T	C	C	Hoxd9_MA0913.1	21	0	-	0	0	.
chr3	159113533	159113534	chr3:159113534:T:C	rs12497650	T	C	T	Hoxd9_MA0913.1	5	1	-	8.853608248980283	2.631945096084414	ACAATAAAAA
chr3	159650791	159650792	chr3:159650792:T:C	rs1978830	T	C	C	Hoxd9_MA0913.1	5	1	-	8.2283733949328	2.006710242036932	GCAATAAAGA
chr3	159829749	159829750	chr3:159829750:C:T	rs13093643	C	T	C	Hoxd9_MA0913.1	12	0	+	0	0	.
chr3	159978144	159978145	chr3:159978145:G:T	rs2886666	G	T	G	Hoxd9_MA0913.1	21	0	+	0	0	.
chr3	160126158	160126159	chr3:160126159:C:G	rs140812256	C	G	C	Hoxd9_MA0913.1	17	0	-	0	0	.
chr3	160179977	160179978	chr3:160179978:G:A	rs146322895	G	A	G	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr3	160279758	160279759	chr3:160279759:C:T	rs61269120	C	T	T	Hoxd9_MA0913.1	16	0	+	0	0	.
chr3	160667819	160667820	chr3:160667820:C:T	chr3:160667820:C:T	C	T	C	Hoxd9_MA0913.1	1	1	+	8.281840948251881	7.933705320522856	GCAATTAATA
chr3	160667821	160667822	chr3:160667822:A:G	rs6765579	A	G	A	Hoxd9_MA0913.1	3	1	+	8.281840948251881	6.454222007756778	GCAATTAATA
chr3	160797009	160797010	chr3:160797010:T:C	chr3:160797010:T:C	T	C	T	Hoxd9_MA0913.1	17	0	-	0	0	.
chr3	160878447	160878448	chr3:160878448:T:C	rs11922296	T	C	C	Hoxd9_MA0913.1	8	1	-	7.7976343601680895	6.224665782710147	GCCATAAAAC
chr3	160880002	160880003	chr3:160880003:C:G	rs1348976	C	G	G	Hoxd9_MA0913.1	0	1	-	8.287725110553424	6.809726442170165	GTCATAAAAT
chr3	161026782	161026783	chr3:161026783:T:G	rs898677	T	G	G	Hoxd9_MA0913.1	7	1	-	8.838502353310592	5.54465560159216	GCCATTAAAA
chr3	161071340	161071341	chr3:161071341:G:A	rs2279106	G	A	A	Hoxd9_MA0913.1	14	0	-	0	0	.
chr3	161222477	161222478	chr3:161222478:C:T	rs78710377	C	T	c	Hoxd9_MA0913.1	24	0	-	0	0	.
chr3	161223529	161223530	chr3:161223530:C:T	rs6774276	C	T	T	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr3	161577216	161577217	chr3:161577217:C:A	rs144107559	C	A	C	Hoxd9_MA0913.1	0	1	-	8.490366725581566	5.4532240296286965	GTCATTAAAA
chr3	161680972	161680973	chr3:161680973:C:T	rs1515720	C	T	T	Hoxd9_MA0913.1	11	0	+	0	0	.
chr3	161793588	161793589	chr3:161793589:T:A	rs36024447	T	A	T	Hoxd9_MA0913.1	13	0	-	0	0	.
chr3	162007771	162007772	chr3:162007772:C:T	rs59872885	C	T	C	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr3	162030001	162030002	chr3:162030002:A:T	rs1397234	A	T	T	Hoxd9_MA0913.1	29	0	+	0	0	.
chr3	162217812	162217813	chr3:162217813:G:A	rs9836187	G	A	A	Hoxd9_MA0913.1	14	0	-	0	0	.
chr3	162217824	162217825	chr3:162217825:G:A	rs78287994	G	A	G	Hoxd9_MA0913.1	2	1	-	8.635860738282448	3.1071859034020073	GCCATAAAAT
chr3	162365218	162365219	chr3:162365219:T:G	rs13100275	T	G	T	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr3	162665342	162665343	chr3:162665343:T:G	rs2361605	T	G	t	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr3	162665348	162665349	chr3:162665349:G:A	rs2361606	G	A	G	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr3	162721465	162721466	chr3:162721466:C:T	rs7431330	C	T	c	Hoxd9_MA0913.1	0	1	-	9.453206344661718	8.505472621251258	GTAATAAAAA
chr3	163033745	163033746	chr3:163033746:T:C	rs4450843	T	C	t	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr3	163033779	163033780	chr3:163033780:T:C	rs4450842	T	C	c	Hoxd9_MA0913.1	25	0	+	0	0	.
chr3	163311444	163311445	chr3:163311445:G:A	rs71315968	G	A	-	Hoxd9_MA0913.1	26	0	+	0	0	.
chr3	163374974	163374975	chr3:163374975:A:T	rs62293469	A	T	A	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr3	163614160	163614161	chr3:163614161:G:T	rs9860110	G	T	G	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr3	164250836	164250837	chr3:164250837:G:A	rs13059129	G	A	G	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr3	164416930	164416931	chr3:164416931:C:T	rs7651057	C	T	C	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr3	165078554	165078555	chr3:165078555:T:C	rs7629658	T	C	C	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr3	165111635	165111636	chr3:165111636:T:G	rs150413356	T	G	T	Hoxd9_MA0913.1	3	1	-	8.719303557138431	4.253072886738375	GCAATAAAAC
chr3	165442857	165442858	chr3:165442858:G:A	rs10513615	G	A	G	Hoxd9_MA0913.1	26	0	-	0	0	.
chr3	165464691	165464692	chr3:165464692:A:G	rs62293358	A	G	A	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr3	166234508	166234509	chr3:166234509:A:G	rs9855808	A	G	G	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr3	166478070	166478071	chr3:166478071:G:T	rs1579038	G	T	G	Hoxd9_MA0913.1	11	0	-	0	0	.
chr3	166478074	166478075	chr3:166478075:T:C	rs1579039	T	C	T	Hoxd9_MA0913.1	7	1	-	8.287725110553424	1.448580633199081	GTCATAAAAT
chr3	166491056	166491057	chr3:166491057:T:C	rs116591601	T	C	T	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr3	166836042	166836043	chr3:166836043:G:A	rs1554549	G	A	G	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr3	167116834	167116835	chr3:167116835:C:T	rs115462404	C	T	C	Hoxd9_MA0913.1	13	0	-	0	0	.
chr3	167253275	167253276	chr3:167253276:G:C	rs114291726	G	C	G	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr3	167918029	167918030	chr3:167918030:T:G	rs17418357	T	G	T	Hoxd9_MA0913.1	3	1	-	9.453206344661718	4.986975674261663	GTAATAAAAA
chr3	167929070	167929071	chr3:167929071:G:A	rs34481589	G	A	G	Hoxd9_MA0913.1	24	0	+	0	0	.
chr3	167942552	167942553	chr3:167942553:A:G	rs28505972	A	G	a	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr3	168263095	168263096	chr3:168263096:C:T	rs79710577	C	T	C	Hoxd9_MA0913.1	29	0	-	0	0	.
chr3	168472933	168472934	chr3:168472934:G:T	rs329076	G	T	G	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr3	168876735	168876736	chr3:168876736:A:T	rs55965546	A	T	A	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr3	168885138	168885139	chr3:168885139:T:A	rs9882423	T	A	T	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr3	169041685	169041686	chr3:169041686:T:C	rs147574826	T	C	T	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr3	169249985	169249986	chr3:169249986:A:G	rs141686554	A	G	A	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr3	169388812	169388813	chr3:169388813:C:T	rs140023102	C	T	C	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr3	169548443	169548444	chr3:169548444:C:T	rs11706777	C	T	T	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr3	169771939	169771940	chr3:169771940:T:C	rs114956060	T	C	T	Hoxd9_MA0913.1	4	1	+	8.371167929409406	5.079033677634427	GTAATAAAAC
chr3	169929295	169929296	chr3:169929296:G:A	rs58878641	G	A	G	Hoxd9_MA0913.1	0	1	+	7.984561357794846	7.0368276343843865	GCAATAAAGT
chr3	169940754	169940755	chr3:169940755:C:T	rs1990803	C	T	C	Hoxd9_MA0913.1	17	0	-	0	0	.
chr3	169964266	169964267	chr3:169964267:G:A	rs73043920	G	A	G	Hoxd9_MA0913.1	10	0	+	0	0	.
chr3	170244694	170244695	chr3:170244695:T:G	rs142967162	T	G	T	Hoxd9_MA0913.1	2	1	-	9.209394307523764	8.287725110553424	GTAATAAAAT
chr3	170359924	170359925	chr3:170359925:A:G	rs3772172	A	G	A	Hoxd9_MA0913.1	9	1	-	8.635860738282448	7.7976343601680895	GCCATAAAAT
chr3	170810771	170810772	chr3:170810772:C:T	rs61790475	C	T	T	Hoxd9_MA0913.1	21	0	+	0	0	.
chr3	171039581	171039582	chr3:171039582:C:T	rs76488036	C	T	C	Hoxd9_MA0913.1	8	1	-	7.943390935685037	9.51635951314298	GCAATTAAGT
chr3	171248717	171248718	chr3:171248718:A:C	rs7615457	A	C	C	Hoxd9_MA0913.1	25	0	+	0	0	.
chr3	171374792	171374793	chr3:171374793:T:C	rs114234998	T	C	T	Hoxd9_MA0913.1	28	0	+	0	0	.
chr3	171438085	171438086	chr3:171438086:C:T	rs6444989	C	T	C	Hoxd9_MA0913.1	12	0	+	0	0	.
chr3	171606698	171606699	chr3:171606699:A:G	rs79154065	A	G	A	Hoxd9_MA0913.1	24	0	-	0	0	.
chr3	171632957	171632958	chr3:171632958:G:A	rs7634685	G	A	G	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr3	171731932	171731933	chr3:171731933:A:T	rs4894754	A	T	T	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr3	171731948	171731949	chr3:171731949:C:G	rs4894755	C	G	G	Hoxd9_MA0913.1	26	0	+	0	0	.
chr3	171771611	171771612	chr3:171771612:T:G	rs9860368	T	G	T	Hoxd9_MA0913.1	9	1	+	7.984561357794846	6.761880054163308	GCAATAAAGT
chr3	171802039	171802040	chr3:171802040:C:T	rs112496157	C	T	C	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr3	171812986	171812987	chr3:171812987:A:T	rs73176200	A	T	A	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr3	171828937	171828938	chr3:171828938:G:A	rs960069137	G	A	G	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr3	172036868	172036869	chr3:172036869:A:T	rs13089431	A	T	A	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr3	172134946	172134947	chr3:172134947:C:T	rs73880107	C	T	T	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr3	172555944	172555945	chr3:172555945:C:A	rs231996	C	A	A	Hoxd9_MA0913.1	19	0	+	0	0	.
chr3	172846625	172846626	chr3:172846626:T:A	rs924399	T	A	A	Hoxd9_MA0913.1	15	0	+	0	0	.
chr3	172846631	172846632	chr3:172846632:A:G	rs1161655333	A	G	A	Hoxd9_MA0913.1	21	0	+	0	0	.
chr3	172857521	172857522	chr3:172857522:C:T	rs150268941	C	T	C	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr3	172947581	172947582	chr3:172947582:G:A	rs9821464	G	A	A	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr3	174125889	174125890	chr3:174125890:G:A	rs9874304	G	A	A	Hoxd9_MA0913.1	0	1	+	8.531537147691377	7.583803424280916	GTCATAAAAA
chr3	174583561	174583562	chr3:174583562:A:T	rs9817983	A	T	T	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr3	174765274	174765275	chr3:174765275:T:C	rs1357446	T	C	T	Hoxd9_MA0913.1	28	0	-	0	0	.
chr3	174853687	174853688	chr3:174853688:A:T	rs10454772	A	T	a	Hoxd9_MA0913.1	5	1	+	9.801341972390743	9.760171550280933	GCAATAAAAA
chr3	175002038	175002039	chr3:175002039:T:A	rs9843888	T	A	T	Hoxd9_MA0913.1	16	0	+	0	0	.
chr3	175084195	175084196	chr3:175084196:G:T	rs11915224	G	T	G	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr3	175084199	175084200	chr3:175084200:C:T	rs11915175	C	T	C	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr3	175279605	175279606	chr3:175279606:A:C	rs4273375	A	C	A	Hoxd9_MA0913.1	29	0	-	0	0	.
chr3	175309936	175309937	chr3:175309937:A:G	chr3:175309937:A:G	A	G	A	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr3	175689945	175689946	chr3:175689946:C:A	rs1931161	C	A	A	Hoxd9_MA0913.1	10	0	-	0	0	.
chr3	176655591	176655592	chr3:176655592:T:C	rs1027184	T	C	C	Hoxd9_MA0913.1	18	0	-	0	0	.
chr3	177106966	177106967	chr3:177106967:A:G	rs1681657	A	G	G	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr3	177414292	177414293	chr3:177414293:T:A	rs11920793	T	A	T	Hoxd9_MA0913.1	26	0	-	0	0	.
chr3	177440897	177440898	chr3:177440898:A:G	rs17561627	A	G	A	Hoxd9_MA0913.1	25	0	+	0	0	.
chr3	177589853	177589854	chr3:177589854:A:G	rs7637965	A	G	a	Hoxd9_MA0913.1	29	0	-	0	0	.
chr3	177589898	177589899	chr3:177589899:G:A	rs12486647	G	A	G	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr3	177615009	177615010	chr3:177615010:A:C	rs17633438	A	C	A	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr3	177637508	177637509	chr3:177637509:A:G	rs6785497	A	G	A	Hoxd9_MA0913.1	4	1	-	9.453206344661718	6.161072092886739	GTAATAAAAA
chr3	178067949	178067950	chr3:178067950:A:T	rs9847529	A	T	A	Hoxd9_MA0913.1	28	0	-	0	0	.
chr3	178181728	178181729	chr3:178181729:A:G	rs4557178	A	G	G	Hoxd9_MA0913.1	24	0	+	0	0	.
chr3	178436726	178436727	chr3:178436727:C:T	rs12488198	C	T	C	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr3	178635187	178635188	chr3:178635188:T:A	rs114777043	T	A	T	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr3	178665466	178665467	chr3:178665467:C:T	rs7427179	C	T	T	Hoxd9_MA0913.1	15	0	-	0	0	.
chr3	178828237	178828238	chr3:178828238:T:C	rs9831934	T	C	T	Hoxd9_MA0913.1	3	1	-	9.51635951314298	7.688740572647875	GCAATTAAAT
chr3	178869177	178869178	chr3:178869178:C:A	rs7624064	C	A	C	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr3	178992796	178992797	chr3:178992797:G:T	rs6787571	G	T	G	Hoxd9_MA0913.1	0	1	+	7.7976343601680895	4.76049166421522	GCCATAAAAC
chr3	179247880	179247881	chr3:179247881:C:T	rs57620676	C	T	.	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr3	179429382	179429383	chr3:179429383:T:C	rs2024497	T	C	T	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr3	179493467	179493468	chr3:179493468:T:C	rs13073870	T	C	C	Hoxd9_MA0913.1	26	0	+	0	0	.
chr3	180825155	180825156	chr3:180825156:C:T	rs148546244	C	T	C	Hoxd9_MA0913.1	22	0	+	0	0	.
chr3	182094869	182094870	chr3:182094870:T:C	rs7616655	T	C	T	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr3	182682179	182682180	chr3:182682180:C:A	rs6772806	C	A	A	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr3	183010880	183010881	chr3:183010881:G:A	rs4074110	G	A	A	Hoxd9_MA0913.1	19	0	-	0	0	.
chr3	183011504	183011505	chr3:183011505:A:C	rs7635560	A	C	C	Hoxd9_MA0913.1	17	0	-	0	0	.
chr3	183331538	183331539	chr3:183331539:C:T	rs4859109	C	T	C	Hoxd9_MA0913.1	16	0	-	0	0	.
chr3	183636695	183636696	chr3:183636696:G:T	chr3:183636696:G:T	G	T	G	Hoxd9_MA0913.1	1	1	-	8.853608248980283	6.433789872955025	ACAATAAAAA
chr3	183784770	183784771	chr3:183784771:T:C	rs263016	T	C	T	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr3	183800210	183800211	chr3:183800211:A:G	rs263044	A	G	A	Hoxd9_MA0913.1	23	0	-	0	0	.
chr3	183842503	183842504	chr3:183842504:A:T	rs7652031	A	T	A	Hoxd9_MA0913.1	12	0	+	0	0	.
chr3	183880209	183880210	chr3:183880210:A:C	rs9290776	A	C	A	Hoxd9_MA0913.1	2	1	+	9.55752993525279	8.635860738282448	GCAATAAAAT
chr3	184097131	184097132	chr3:184097132:T:G	rs9836515	T	G	T	Hoxd9_MA0913.1	13	0	+	0	0	.
chr3	184526280	184526281	chr3:184526281:A:T	rs75381498	A	T	A	Hoxd9_MA0913.1	3	1	+	8.838502353310592	5.224162484181608	GCCATTAAAA
chr3	185176856	185176857	chr3:185176857:T:C	rs6776547	T	C	T	Hoxd9_MA0913.1	15	0	+	0	0	.
chr3	185779846	185779847	chr3:185779847:A:C	rs4376068	A	C	C	Hoxd9_MA0913.1	8	1	+	7.75646393805828	5.756800298405739	GCCATTAAAC
chr3	185917668	185917669	chr3:185917669:A:G	rs112068216	A	G	A	Hoxd9_MA0913.1	21	0	+	0	0	.
chr3	186266917	186266918	chr3:186266918:C:G	rs2017437	C	G	G	Hoxd9_MA0913.1	0	1	-	8.490366725581566	7.012368057198309	GTCATTAAAA
chr3	186369379	186369380	chr3:186369380:G:T	rs7628096	G	T	T	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr3	186772174	186772175	chr3:186772175:T:C	rs166481	T	C	.	Hoxd9_MA0913.1	3	1	-	9.453206344661718	7.625587404166614	GTAATAAAAA
chr3	186787997	186787998	chr3:186787998:G:C	rs113874571	G	C	.	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr3	186815677	186815678	chr3:186815678:A:G	rs541791176	A	G	A	Hoxd9_MA0913.1	7	1	+	9.55752993525279	2.7183854578984463	GCAATAAAAT
chr3	186980087	186980088	chr3:186980088:G:T	rs78949521	G	T	g	Hoxd9_MA0913.1	14	0	+	0	0	.
chr3	187026774	187026775	chr3:187026775:G:A	rs28674898	G	A	G	Hoxd9_MA0913.1	24	0	+	0	0	.
chr3	187601768	187601769	chr3:187601769:C:T	rs62279820	C	T	C	Hoxd9_MA0913.1	18	0	-	0	0	.
chr3	187629964	187629965	chr3:187629965:C:T	rs148558798	C	T	C	Hoxd9_MA0913.1	25	0	+	0	0	.
chr3	187912938	187912939	chr3:187912939:A:G	rs11711595	A	G	A	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr3	188037090	188037091	chr3:188037091:G:T	rs11921892	G	T	G	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr3	188037095	188037096	chr3:188037096:C:T	rs11921831	C	T	T	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr3	188037126	188037127	chr3:188037127:A:T	rs67305408	A	T	A	Hoxd9_MA0913.1	23	0	+	0	0	.
chr3	188159668	188159669	chr3:188159669:G:A	rs71308916	G	A	G	Hoxd9_MA0913.1	16	0	-	0	0	.
chr3	188183773	188183774	chr3:188183774:A:G	rs9863914	A	G	G	Hoxd9_MA0913.1	4	1	-	7.7976343601680895	4.50550010839311	GCCATAAAAC
chr3	188260424	188260425	chr3:188260425:G:A	rs62291383	G	A	G	Hoxd9_MA0913.1	26	0	-	0	0	.
chr3	188641647	188641648	chr3:188641648:A:C	rs10937361	A	C	C	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr3	188657109	188657110	chr3:188657110:A:G	rs66844029	A	G	A	Hoxd9_MA0913.1	13	0	-	0	0	.
chr3	188686342	188686343	chr3:188686343:A:G	rs115005955	A	G	A	Hoxd9_MA0913.1	28	0	+	0	0	.
chr3	188951302	188951303	chr3:188951303:T:G	rs574177665	T	G	T	Hoxd9_MA0913.1	3	1	-	8.287725110553424	3.821494440153368	GTCATAAAAT
chr3	188965242	188965243	chr3:188965243:A:G	rs848968	A	G	A	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr3	189190592	189190593	chr3:189190593:A:G	rs4687029	A	G	A	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr3	189689739	189689740	chr3:189689740:T:A	rs9834524	T	A	A	Hoxd9_MA0913.1	3	1	-	8.812437826870472	5.1980979577414885	ACAATTAAAA
chr3	189781499	189781500	chr3:189781500:G:A	rs12487991	G	A	G	Hoxd9_MA0913.1	18	0	+	0	0	.
chr3	190040308	190040309	chr3:190040309:T:C	rs2594173	T	C	T	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr3	190110870	190110871	chr3:190110871:A:G	rs12494405	A	G	A	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr3	190305013	190305014	chr3:190305014:T:C	rs3864005	T	C	t	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr3	190432549	190432550	chr3:190432550:C:T	rs11720443	C	T	C	Hoxd9_MA0913.1	15	0	-	0	0	.
chr3	190607452	190607453	chr3:190607453:G:A	rs11719416	G	A	G	Hoxd9_MA0913.1	19	0	+	0	0	.
chr3	190643800	190643801	chr3:190643801:C:T	rs180951656	C	T	C	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr3	191121338	191121339	chr3:191121339:T:A	rs10804929	T	A	T	Hoxd9_MA0913.1	16	0	+	0	0	.
chr3	191138027	191138028	chr3:191138028:G:T	rs1598244	G	T	G	Hoxd9_MA0913.1	15	0	-	0	0	.
chr3	191240022	191240023	chr3:191240023:A:G	rs73199665	A	G	A	Hoxd9_MA0913.1	12	0	+	0	0	.
chr3	191247826	191247827	chr3:191247827:A:G	chr3:191247827:A:G	A	G	A	Hoxd9_MA0913.1	27	0	+	0	0	.
chr3	191252869	191252870	chr3:191252870:G:T	rs9878041	G	T	T	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr3	191328940	191328941	chr3:191328941:T:C	rs112724649	T	C	C	Hoxd9_MA0913.1	14	0	-	0	0	.
chr3	191328955	191328956	chr3:191328956:C:T	rs62617841	C	T	C	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr3	191330732	191330733	chr3:191330733:C:A	rs980320	C	A	C	Hoxd9_MA0913.1	0	1	-	8.719303557138431	5.682160861185562	GCAATAAAAC
chr3	191334193	191334194	chr3:191334194:A:G	rs1347400	A	G	G	Hoxd9_MA0913.1	20	0	+	0	0	.
chr3	191335793	191335794	chr3:191335794:C:T	rs73201630	C	T	C	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr3	191378261	191378262	chr3:191378262:C:T	rs7636707	C	T	C	Hoxd9_MA0913.1	3	1	-	7.932552609785828	9.760171550280933	GCAGTTAAAA
chr3	191380118	191380119	chr3:191380119:C:T	rs293812	C	T	C	Hoxd9_MA0913.1	14	0	-	0	0	.
chr3	191499525	191499526	chr3:191499526:T:A	rs9790048	T	A	T	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr3	191787460	191787461	chr3:191787461:G:A	rs779276	G	A	-	Hoxd9_MA0913.1	27	0	+	0	0	.
chr3	192039008	192039009	chr3:192039009:C:T	rs566843657	C	T	C	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr3	192055732	192055733	chr3:192055733:A:T	rs9878402	A	T	A	Hoxd9_MA0913.1	20	0	+	0	0	.
chr3	192658424	192658425	chr3:192658425:C:T	rs74491194	C	T	C	Hoxd9_MA0913.1	11	0	-	0	0	.
chr3	192804674	192804675	chr3:192804675:A:G	rs12634154	A	G	G	Hoxd9_MA0913.1	18	0	-	0	0	.
chr3	192805184	192805185	chr3:192805185:T:G	rs7646191	T	G	G	Hoxd9_MA0913.1	12	0	-	0	0	.
chr3	192885539	192885540	chr3:192885540:G:A	rs6805010	G	A	A	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr3	192901295	192901296	chr3:192901296:G:A	rs7621229	G	A	G	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr3	193231293	193231294	chr3:193231294:C:T	rs11924860	C	T	C	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr3	193766626	193766627	chr3:193766627:T:C	rs904878	T	C	C	Hoxd9_MA0913.1	15	0	-	0	0	.
chr3	193960513	193960514	chr3:193960514:T:C	rs75594602	T	C	T	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr3	193960547	193960548	chr3:193960548:G:A	rs114094864	G	A	G	Hoxd9_MA0913.1	18	0	+	0	0	.
chr3	194090338	194090339	chr3:194090339:G:A	rs2368044	G	A	A	Hoxd9_MA0913.1	24	0	-	0	0	.
chr3	194122437	194122438	chr3:194122438:A:G	rs7618027	A	G	A	Hoxd9_MA0913.1	26	0	+	0	0	.
chr3	194140417	194140418	chr3:194140418:C:T	rs9823883	C	T	T	Hoxd9_MA0913.1	23	0	-	0	0	.
chr3	194497917	194497918	chr3:194497918:A:T	rs35711692	A	T	A	Hoxd9_MA0913.1	10	0	+	0	0	.
chr3	194602890	194602891	chr3:194602891:T:G	rs9816961	T	G	T	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr3	194602893	194602894	chr3:194602894:T:G	rs78800074	T	G	T	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr3	194633760	194633761	chr3:194633761:G:A	rs6799416	G	A	G	Hoxd9_MA0913.1	0	1	+	7.973723031895638	7.025989308485178	GCAGTAAAAA
chr3	194633784	194633785	chr3:194633785:A:G	rs6437394	A	G	G	Hoxd9_MA0913.1	24	0	+	0	0	.
chr3	194636858	194636859	chr3:194636859:A:C	rs148493478	A	C	A	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr3	194639931	194639932	chr3:194639932:A:G	rs79042079	A	G	G	Hoxd9_MA0913.1	13	0	+	0	0	.
chr3	194659229	194659230	chr3:194659230:T:C	rs1773194	T	C	C	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr3	194781743	194781744	chr3:194781744:G:C	rs6806407	G	C	C	Hoxd9_MA0913.1	26	0	-	0	0	.
chr3	194854558	194854559	chr3:194854559:G:C	rs62293972	G	C	G	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr3	194854592	194854593	chr3:194854593:C:G	rs55858434	C	G	C	Hoxd9_MA0913.1	29	0	+	0	0	.
chr3	194870267	194870268	chr3:194870268:C:A	rs142796415	C	A	C	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr3	194870307	194870308	chr3:194870308:A:C	rs6799950	A	C	C	Hoxd9_MA0913.1	21	0	+	0	0	.
chr3	194942273	194942274	chr3:194942274:A:G	rs4467383	A	G	G	Hoxd9_MA0913.1	7	1	+	9.168223885413955	2.3290794080596116	GTAATTAAAT
chr3	194942281	194942282	chr3:194942282:A:C	rs62291479	A	C	A	Hoxd9_MA0913.1	15	0	+	0	0	.
chr3	194991661	194991662	chr3:194991662:G:A	rs2676857	G	A	G	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr3	195114613	195114614	chr3:195114614:G:C	rs62290326	G	C	G	Hoxd9_MA0913.1	25	0	-	0	0	.
chr3	195149775	195149776	chr3:195149776:A:T	rs60023213	A	T	T	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr3	195155547	195155548	chr3:195155548:T:A	rs56355640	T	A	T	Hoxd9_MA0913.1	6	1	-	9.412035922551908	6.988715975017923	GTAATTAAAA
chr3	195205352	195205353	chr3:195205353:G:A	rs59746085	G	A	A	Hoxd9_MA0913.1	26	0	+	0	0	.
chr3	195206441	195206442	chr3:195206442:C:T	rs62285235	C	T	C	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr3	195210656	195210657	chr3:195210657:C:T	rs987691312	C	T	C	Hoxd9_MA0913.1	25	0	-	0	0	.
chr3	195250288	195250289	chr3:195250289:G:A	rs148589948	G	A	G	Hoxd9_MA0913.1	27	0	+	0	0	.
chr3	195699433	195699434	chr3:195699434:T:C	rs9860655	T	C	C	Hoxd9_MA0913.1	26	0	-	0	0	.
chr3	195700904	195700905	chr3:195700905:T:C	rs1874020	T	C	C	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr3	196006216	196006217	chr3:196006217:T:C	rs13313941	T	C	C	Hoxd9_MA0913.1	16	0	-	0	0	.
chr3	196169100	196169101	chr3:196169101:T:C	rs78180666	T	C	T	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr3	196292499	196292500	chr3:196292500:A:G	rs55878253	A	G	A	Hoxd9_MA0913.1	3	1	+	9.801341972390743	7.973723031895638	GCAATAAAAA
chr3	196607544	196607545	chr3:196607545:G:A	rs11715619	G	A	A	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr3	196835391	196835392	chr3:196835392:A:G	rs76047509	A	G	G	Hoxd9_MA0913.1	26	0	-	0	0	.
chr3	196866917	196866918	chr3:196866918:G:A	rs4916565	G	A	A	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr3	196963129	196963130	chr3:196963130:C:G	rs335822	C	G	G	Hoxd9_MA0913.1	21	0	-	0	0	.
chr3	197190700	197190701	chr3:197190701:C:T	rs4491876	C	T	C	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr3	197203806	197203807	chr3:197203807:T:C	rs114364631	T	C	T	Hoxd9_MA0913.1	12	0	+	0	0	.
chr3	197333994	197333995	chr3:197333995:G:A	rs115016807	G	A	G	Hoxd9_MA0913.1	15	0	-	0	0	.
chr3	197425929	197425930	chr3:197425930:T:C	rs9874443	T	C	C	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr3	197425939	197425940	chr3:197425940:A:G	rs9870382	A	G	G	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr3	197465146	197465147	chr3:197465147:G:A	rs1431501	G	A	G	Hoxd9_MA0913.1	11	0	+	0	0	.
chr3	197564524	197564525	chr3:197564525:C:T	rs35077721	C	T	C	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr3	197720782	197720783	chr3:197720783:C:T	rs6796856	C	T	C	Hoxd9_MA0913.1	25	0	+	0	0	.
chr3	197848088	197848089	chr3:197848089:G:A	rs77727730	G	A	G	Hoxd9_MA0913.1	14	0	-	0	0	.
chr4	728808	728809	chr4:728809:C:T	rs73221121	C	T	C	Hoxd9_MA0913.1	13	0	+	0	0	.
chr4	923909	923910	chr4:923910:C:T	rs6847650	C	T	C	Hoxd9_MA0913.1	28	0	+	0	0	.
chr4	1089323	1089324	chr4:1089324:C:T	rs676561	C	T	T	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr4	1550542	1550543	chr4:1550543:C:T	rs1031250745	C	T	C	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr4	1550557	1550558	chr4:1550558:G:A	rs60284047	G	A	G	Hoxd9_MA0913.1	14	0	+	0	0	.
chr4	1577583	1577584	chr4:1577584:T:G	rs182647966	T	G	T	Hoxd9_MA0913.1	9	1	-	9.412035922551908	8.329997507299597	GTAATTAAAA
chr4	1709306	1709307	chr4:1709307:G:A	rs182093232	G	A	G	Hoxd9_MA0913.1	13	0	+	0	0	.
chr4	1972365	1972366	chr4:1972366:G:A	rs1403784165	G	A	G	Hoxd9_MA0913.1	2	1	+	8.123883530932645	9.801341972390743	GCGATAAAAA
chr4	2163213	2163214	chr4:2163214:C:A	rs618262	C	A	A	Hoxd9_MA0913.1	22	0	+	0	0	.
chr4	2413116	2413117	chr4:2413117:T:C	rs61790170	T	C	T	Hoxd9_MA0913.1	3	1	-	8.187202972822991	6.359584032327886	GCAATTAAGA
chr4	2413132	2413133	chr4:2413133:G:C	rs73074345	G	C	G	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr4	2519006	2519007	chr4:2519007:T:C	rs74545621	T	C	T	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr4	2593740	2593741	chr4:2593741:C:G	rs34572468	C	G	C	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr4	3078178	3078179	chr4:3078179:G:C	rs28377140	G	C	C	Hoxd9_MA0913.1	23	0	+	0	0	.
chr4	3212147	3212148	chr4:3212148:T:C	rs362278	T	C	T	Hoxd9_MA0913.1	5	1	+	9.412035922551908	6.018404573292349	GTAATTAAAA
chr4	3391399	3391400	chr4:3391400:C:G	rs35563310	C	G	C	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr4	3637707	3637708	chr4:3637708:G:A	rs60148846	G	A	G	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr4	4247892	4247893	chr4:4247893:T:C	rs2916464	T	C	C	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr4	4247895	4247896	chr4:4247896:G:T	rs535900843	G	T	G	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr4	4365271	4365272	chr4:4365272:T:G	rs7690552	T	G	G	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr4	4490083	4490084	chr4:4490084:C:T	rs1992391	C	T	T	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr4	4542815	4542816	chr4:4542816:G:T	rs78227700	G	T	G	Hoxd9_MA0913.1	16	0	-	0	0	.
chr4	4652629	4652630	chr4:4652630:T:C	rs2063413	T	C	C	Hoxd9_MA0913.1	8	1	-	9.412035922551908	7.839067345093966	GTAATTAAAA
chr4	4760134	4760135	chr4:4760135:A:G	rs1318947	A	G	A	Hoxd9_MA0913.1	17	0	+	0	0	.
chr4	4830972	4830973	chr4:4830973:G:C	rs28378669	G	C	G	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr4	4980840	4980841	chr4:4980841:G:A	rs562285637	G	A	G	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr4	5292104	5292105	chr4:5292105:C:T	rs78584414	C	T	C	Hoxd9_MA0913.1	12	0	+	0	0	.
chr4	5470680	5470681	chr4:5470681:T:A	rs150078236	T	A	T	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr4	5795760	5795761	chr4:5795761:C:A	rs10937678	C	A	A	Hoxd9_MA0913.1	27	0	-	0	0	.
chr4	5967004	5967005	chr4:5967005:T:C	rs13150768	T	C	t	Hoxd9_MA0913.1	24	0	-	0	0	.
chr4	5991259	5991260	chr4:5991260:T:C	rs143669729	T	C	T	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr4	6111484	6111485	chr4:6111485:A:C	rs140856634	A	C	A	Hoxd9_MA0913.1	22	0	-	0	0	.
chr4	6175328	6175329	chr4:6175329:T:C	rs17773514	T	C	T	Hoxd9_MA0913.1	16	0	+	0	0	.
chr4	6429691	6429692	chr4:6429692:C:G	rs10516180	C	G	C	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr4	6696067	6696068	chr4:6696068:A:C	rs3822261	A	C	C	Hoxd9_MA0913.1	22	0	-	0	0	.
chr4	6696094	6696095	chr4:6696095:C:T	rs3822260	C	T	T	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr4	6709102	6709103	chr4:6709103:T:A	rs1396634582	T	A	T	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr4	6709805	6709806	chr4:6709806:C:G	rs537894782	C	G	C	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr4	6944272	6944273	chr4:6944273:C:T	rs66808450	C	T	C	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr4	7070271	7070272	chr4:7070272:C:T	rs66925245	C	T	C	Hoxd9_MA0913.1	22	0	+	0	0	.
chr4	7348851	7348852	chr4:7348852:C:G	rs116486576	C	G	C	Hoxd9_MA0913.1	21	0	-	0	0	.
chr4	7399093	7399094	chr4:7399094:A:G	rs12501740	A	G	G	Hoxd9_MA0913.1	20	0	-	0	0	.
chr4	7399411	7399412	chr4:7399412:A:G	rs10001291	A	G	G	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr4	7399480	7399481	chr4:7399481:C:T	rs4689726	C	T	C	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr4	7779832	7779833	chr4:7779833:G:A	rs10025154	G	A	G	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr4	7836215	7836216	chr4:7836216:A:G	rs4274847	A	G	A	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr4	7905599	7905600	chr4:7905600:C:T	rs10213406	C	T	C	Hoxd9_MA0913.1	28	0	-	0	0	.
chr4	7905625	7905626	chr4:7905626:G:A	rs114205902	G	A	G	Hoxd9_MA0913.1	2	1	-	8.594690316172638	3.066015481292197	GCCATTAAAT
chr4	8207640	8207641	chr4:8207641:C:T	rs748964847	C	T	C	Hoxd9_MA0913.1	14	0	-	0	0	.
chr4	8207655	8207656	chr4:8207656:A:G	rs1281132	A	G	G	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr4	8278797	8278798	chr4:8278798:A:G	rs28666773	A	G	G	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr4	8393556	8393557	chr4:8393557:A:C	rs9291392	A	C	C	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr4	8547697	8547698	chr4:8547698:C:T	rs4561917	C	T	C	Hoxd9_MA0913.1	16	0	+	0	0	.
chr4	8647276	8647277	chr4:8647277:A:T	rs4352460	A	T	T	Hoxd9_MA0913.1	6	1	+	8.812437826870472	6.389117879336487	ACAATTAAAA
chr4	8663585	8663586	chr4:8663586:A:C	rs757048480	A	C	A	Hoxd9_MA0913.1	22	0	-	0	0	.
chr4	8956401	8956402	chr4:8956402:A:G	rs536364816	A	G	N	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr4	10080531	10080532	chr4:10080532:C:A	rs10516200	C	A	A	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr4	10118984	10118985	chr4:10118985:T:C	rs12374320	T	C	c	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr4	10124249	10124250	chr4:10124250:C:T	rs7699671	C	T	c	Hoxd9_MA0913.1	0	1	-	8.187202972822991	7.2394692494125295	GCAATTAAGA
chr4	10243729	10243730	chr4:10243730:G:A	rs2159863	G	A	-	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr4	10297002	10297003	chr4:10297003:C:T	rs139752864	C	T	C	Hoxd9_MA0913.1	19	0	+	0	0	.
chr4	10715314	10715315	chr4:10715315:G:C	rs4293777	G	C	G	Hoxd9_MA0913.1	13	0	-	0	0	.
chr4	10958338	10958339	chr4:10958339:C:A	rs983973	C	A	C	Hoxd9_MA0913.1	21	0	+	0	0	.
chr4	11505427	11505428	chr4:11505428:T:G	rs6847037	T	G	T	Hoxd9_MA0913.1	2	1	-	8.2283733949328	7.306704197962459	GCAATAAAGA
chr4	11505829	11505830	chr4:11505830:C:A	rs4916640	C	A	C	Hoxd9_MA0913.1	19	0	-	0	0	.
chr4	11505862	11505863	chr4:11505863:G:A	rs77147363	G	A	G	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr4	11720367	11720368	chr4:11720368:T:C	rs11729868	T	C	T	Hoxd9_MA0913.1	8	1	-	9.55752993525279	7.984561357794846	GCAATAAAAT
chr4	11735747	11735748	chr4:11735748:T:C	rs1388861	T	C	C	Hoxd9_MA0913.1	6	1	-	8.293678209511443	1.4782575417321	GCAATTAAAG
chr4	12667513	12667514	chr4:12667514:A:T	rs28796289	A	T	T	Hoxd9_MA0913.1	6	1	+	8.287725110553424	5.8644051630194385	GTCATAAAAT
chr4	12667527	12667528	chr4:12667528:G:A	rs59769599	G	A	G	Hoxd9_MA0913.1	20	0	+	0	0	.
chr4	12702480	12702481	chr4:12702481:A:T	rs7672510	A	T	A	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr4	12702484	12702485	chr4:12702485:G:A	rs7693586	G	A	G	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr4	12990294	12990295	chr4:12990295:G:A	rs34285633	G	A	G	Hoxd9_MA0913.1	2	1	+	8.082713108822833	9.760171550280933	GCGATTAAAA
chr4	13092636	13092637	chr4:13092637:G:A	rs1021873	G	A	G	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr4	13918826	13918827	chr4:13918827:T:C	rs140918687	T	C	T	Hoxd9_MA0913.1	1	1	+	8.490366725581566	8.838502353310592	GTCATTAAAA
chr4	14022986	14022987	chr4:14022987:G:A	rs571642	G	A	G	Hoxd9_MA0913.1	27	0	+	0	0	.
chr4	14183559	14183560	chr4:14183560:A:G	rs6846915	A	G	A	Hoxd9_MA0913.1	6	1	+	7.75646393805828	0.9410432702789389	GCCATTAAAC
chr4	14223564	14223565	chr4:14223565:G:T	rs11940373	G	T	G	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr4	15117354	15117355	chr4:15117355:C:T	rs1378341	C	T	C	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr4	15147276	15147277	chr4:15147277:C:A	rs74768732	C	A	C	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr4	15182923	15182924	chr4:15182924:G:C	rs897347	G	C	C	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr4	15241643	15241644	chr4:15241644:G:A	rs6449119	G	A	A	Hoxd9_MA0913.1	11	0	+	0	0	.
chr4	15316197	15316198	chr4:15316198:G:A	rs59217347	G	A	A	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr4	15787693	15787694	chr4:15787694:C:T	rs3775955	C	T	T	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr4	15983918	15983919	chr4:15983919:T:C	rs2302169	T	C	T	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr4	16030188	16030189	chr4:16030189:G:T	rs885289	G	T	G	Hoxd9_MA0913.1	12	0	+	0	0	.
chr4	16030193	16030194	chr4:16030194:C:T	rs146524567	C	T	C	Hoxd9_MA0913.1	17	0	+	0	0	.
chr4	16033980	16033981	chr4:16033981:A:T	rs13128332	A	T	T	Hoxd9_MA0913.1	2	1	+	9.168223885413955	2.717879853563173	GTAATTAAAT
chr4	16161641	16161642	chr4:16161642:C:G	rs317854	C	G	G	Hoxd9_MA0913.1	10	0	+	0	0	.
chr4	16232113	16232114	chr4:16232114:G:T	rs80187011	G	T	G	Hoxd9_MA0913.1	1	1	-	8.32301137036169	5.9031929943364325	GCAATAAATA
chr4	16256426	16256427	chr4:16256427:C:A	rs203448	C	A	C	Hoxd9_MA0913.1	15	0	+	0	0	.
chr4	16442354	16442355	chr4:16442355:C:T	rs75404600	C	T	T	Hoxd9_MA0913.1	17	0	-	0	0	.
chr4	17006552	17006553	chr4:17006553:G:C	rs1022296	G	C	G	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr4	17204923	17204924	chr4:17204924:A:G	rs12650417	A	G	A	Hoxd9_MA0913.1	3	1	+	8.531537147691377	6.703918207196272	GTCATAAAAA
chr4	17272261	17272262	chr4:17272262:A:G	rs28532849	A	G	A	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr4	17310718	17310719	chr4:17310719:T:C	rs111808517	T	C	T	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr4	17358508	17358509	chr4:17358509:T:G	rs12651615	T	G	T	Hoxd9_MA0913.1	27	0	+	0	0	.
chr4	17494573	17494574	chr4:17494574:A:G	rs10084995	A	G	G	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr4	18291520	18291521	chr4:18291521:A:G	rs13147572	A	G	A	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr4	18571692	18571693	chr4:18571693:C:G	rs1477901	C	G	C	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr4	18646325	18646326	chr4:18646326:A:C	rs4476594	A	C	C	Hoxd9_MA0913.1	18	0	-	0	0	.
chr4	18892051	18892052	chr4:18892052:G:A	rs4235286	G	A	A	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr4	19181781	19181782	chr4:19181782:G:A	rs185951716	G	A	G	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr4	19379554	19379555	chr4:19379555:A:G	rs35881948	A	G	A	Hoxd9_MA0913.1	7	1	+	8.635860738282448	1.7967162609281053	GCCATAAAAT
chr4	19379566	19379567	chr4:19379567:T:G	rs1552659	T	G	G	Hoxd9_MA0913.1	19	0	+	0	0	.
chr4	19379575	19379576	chr4:19379576:C:T	rs75411478	C	T	C	Hoxd9_MA0913.1	28	0	+	0	0	.
chr4	20194175	20194176	chr4:20194176:T:C	rs59532782	T	C	T	Hoxd9_MA0913.1	29	0	-	0	0	.
chr4	20194201	20194202	chr4:20194202:T:C	rs1158700027	T	C	T	Hoxd9_MA0913.1	3	1	-	8.812437826870472	6.984818886375368	ACAATTAAAA
chr4	20194206	20194207	chr4:20194207:C:T	rs677198	C	T	T	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr4	20312068	20312069	chr4:20312069:T:C	rs1027876312	T	C	T	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr4	20724452	20724453	chr4:20724453:T:C	rs7673805	T	C	c	Hoxd9_MA0913.1	19	0	-	0	0	.
chr4	21069124	21069125	chr4:21069125:G:A	rs80144710	G	A	G	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr4	21070267	21070268	chr4:21070268:C:T	rs74286710	C	T	C	Hoxd9_MA0913.1	1	1	+	8.082713108822833	7.73457748109381	GCGATTAAAA
chr4	21093808	21093809	chr4:21093809:A:G	rs9996902	A	G	G	Hoxd9_MA0913.1	29	0	+	0	0	.
chr4	21845645	21845646	chr4:21845646:C:A	rs10938860	C	A	A	Hoxd9_MA0913.1	19	0	+	0	0	.
chr4	21845979	21845980	chr4:21845980:T:C	rs55777248	T	C	T	Hoxd9_MA0913.1	26	0	-	0	0	.
chr4	21845982	21845983	chr4:21845983:T:G	rs1398833	T	G	T	Hoxd9_MA0913.1	23	0	-	0	0	.
chr4	21889034	21889035	chr4:21889035:A:C	rs73258511	A	C	A	Hoxd9_MA0913.1	22	0	-	0	0	.
chr4	22370067	22370068	chr4:22370068:T:C	rs12108221	T	C	T	Hoxd9_MA0913.1	18	0	+	0	0	.
chr4	22683968	22683969	chr4:22683969:G:C	rs12512285	G	C	G	Hoxd9_MA0913.1	23	0	-	0	0	.
chr4	22795006	22795007	chr4:22795007:G:C	rs75420049	G	C	G	Hoxd9_MA0913.1	0	1	+	8.838502353310592	7.360503684927334	GCCATTAAAA
chr4	23629752	23629753	chr4:23629753:C:T	rs883120	C	T	T	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr4	23818402	23818403	chr4:23818403:T:C	rs61688770	T	C	T	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr4	24364016	24364017	chr4:24364017:A:G	rs145831356	A	G	A	Hoxd9_MA0913.1	8	1	+	8.082713108822833	6.509744531364891	GCGATTAAAA
chr4	24434488	24434489	chr4:24434489:C:T	rs368744768	C	T	C	Hoxd9_MA0913.1	25	0	+	0	0	.
chr4	24651387	24651388	chr4:24651388:G:A	rs115303215	G	A	g	Hoxd9_MA0913.1	16	0	-	0	0	.
chr4	24702726	24702727	chr4:24702727:T:C	rs73248472	T	C	T	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr4	24938374	24938375	chr4:24938375:T:C	rs10004346	T	C	T	Hoxd9_MA0913.1	22	0	+	0	0	.
chr4	25014077	25014078	chr4:25014078:A:G	rs1466224387	A	G	A	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr4	25100538	25100539	chr4:25100539:A:T	rs16876812	A	T	A	Hoxd9_MA0913.1	6	1	+	7.932552609785828	5.5092326622518435	GCAGTTAAAA
chr4	25100553	25100554	chr4:25100554:T:C	rs7693741	T	C	C	Hoxd9_MA0913.1	21	0	+	0	0	.
chr4	25284290	25284291	chr4:25284291:A:G	rs12649921	A	G	A	Hoxd9_MA0913.1	26	0	+	0	0	.
chr4	25346148	25346149	chr4:25346149:G:A	rs13114588	G	A	G	Hoxd9_MA0913.1	14	0	+	0	0	.
chr4	25346700	25346701	chr4:25346701:A:G	rs167584	A	G	A	Hoxd9_MA0913.1	3	1	+	8.838502353310592	7.010883412815486	GCCATTAAAA
chr4	25723144	25723145	chr4:25723145:C:A	rs186214374	C	A	C	Hoxd9_MA0913.1	15	0	-	0	0	.
chr4	25978665	25978666	chr4:25978666:T:G	rs11736282	T	G	T	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr4	26086862	26086863	chr4:26086863:A:G	rs17630525	A	G	A	Hoxd9_MA0913.1	26	0	-	0	0	.
chr4	26226843	26226844	chr4:26226844:C:T	rs78940240	C	T	C	Hoxd9_MA0913.1	9	1	+	8.719303557138431	9.55752993525279	GCAATAAAAC
chr4	26231196	26231197	chr4:26231197:G:C	rs73114507	G	C	G	Hoxd9_MA0913.1	22	0	+	0	0	.
chr4	26345349	26345350	chr4:26345350:T:C	rs7661241	T	C	T	Hoxd9_MA0913.1	25	0	+	0	0	.
chr4	26400564	26400565	chr4:26400565:A:G	rs11726853	A	G	G	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr4	26624337	26624338	chr4:26624338:C:T	rs114396570	C	T	C	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr4	27201150	27201151	chr4:27201151:T:C	rs6857150	T	C	C	Hoxd9_MA0913.1	19	0	+	0	0	.
chr4	27217553	27217554	chr4:27217554:C:G	rs17591810	C	G	C	Hoxd9_MA0913.1	29	0	-	0	0	.
chr4	27852542	27852543	chr4:27852543:A:G	rs13148455	A	G	A	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr4	28294823	28294824	chr4:28294824:T:C	rs1603636	T	C	C	Hoxd9_MA0913.1	22	0	+	0	0	.
chr4	28688492	28688493	chr4:28688493:A:C	rs76901917	A	C	A	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr4	29081848	29081849	chr4:29081849:T:C	rs4692380	T	C	T	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr4	29293978	29293979	chr4:29293979:C:T	rs13118165	C	T	T	Hoxd9_MA0913.1	27	0	+	0	0	.
chr4	30793542	30793543	chr4:30793543:G:A	rs9999382	G	A	A	Hoxd9_MA0913.1	13	0	+	0	0	.
chr4	30877505	30877506	chr4:30877506:C:T	rs10939315	C	T	C	Hoxd9_MA0913.1	22	0	+	0	0	.
chr4	30954726	30954727	chr4:30954727:A:T	rs4499665	A	T	A	Hoxd9_MA0913.1	9	1	+	8.838502353310592	8.594690316172638	GCCATTAAAA
chr4	31141315	31141316	chr4:31141316:C:T	rs16884410	C	T	C	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr4	31226270	31226271	chr4:31226271:A:T	rs114093428	A	T	A	Hoxd9_MA0913.1	23	0	-	0	0	.
chr4	31465637	31465638	chr4:31465638:T:C	rs567689277	T	C	T	Hoxd9_MA0913.1	26	0	-	0	0	.
chr4	31592680	31592681	chr4:31592681:A:G	rs7439373	A	G	G	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr4	31964883	31964884	chr4:31964884:C:T	rs28607914	C	T	C	Hoxd9_MA0913.1	17	0	-	0	0	.
chr4	31964938	31964939	chr4:31964939:G:T	rs10026863	G	T	G	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr4	32244176	32244177	chr4:32244177:G:A	rs11133185	G	A	A	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr4	32443349	32443350	chr4:32443350:A:T	rs4588507	A	T	A	Hoxd9_MA0913.1	4	1	-	9.55752993525279	6.870278511066632	GCAATAAAAT
chr4	32795946	32795947	chr4:32795947:G:T	rs76122901	G	T	G	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr4	32824683	32824684	chr4:32824684:C:T	rs71207858	C	T	t	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr4	34010972	34010973	chr4:34010973:C:A	rs191867571	C	A	c	Hoxd9_MA0913.1	0	1	-	9.801341972390743	6.764199276437873	GCAATAAAAA
chr4	34191832	34191833	chr4:34191833:A:G	rs6842952	A	G	A	Hoxd9_MA0913.1	23	0	+	0	0	.
chr4	34366254	34366255	chr4:34366255:G:A	rs4463088	G	A	A	Hoxd9_MA0913.1	12	0	-	0	0	.
chr4	34552366	34552367	chr4:34552367:C:T	rs1842529	C	T	C	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr4	34651519	34651520	chr4:34651520:T:A	rs73225656	T	A	A	Hoxd9_MA0913.1	10	0	+	0	0	.
chr4	35491056	35491057	chr4:35491057:C:T	rs1399125	C	T	T	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr4	36105174	36105175	chr4:36105175:A:C	rs6531410	A	C	C	Hoxd9_MA0913.1	22	0	+	0	0	.
chr4	36404154	36404155	chr4:36404155:T:C	rs924536	T	C	C	Hoxd9_MA0913.1	14	0	+	0	0	.
chr4	37457328	37457329	chr4:37457329:A:C	rs35664815	A	C	A	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr4	37516940	37516941	chr4:37516941:A:G	rs2928331	A	G	G	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr4	37676195	37676196	chr4:37676196:C:G	rs78587598	C	G	C	Hoxd9_MA0913.1	24	0	-	0	0	.
chr4	37978532	37978533	chr4:37978533:T:A	rs185572412	T	A	T	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr4	37994677	37994678	chr4:37994678:T:C	rs7665468	T	C	T	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr4	38103539	38103540	chr4:38103540:A:G	rs933822	A	G	G	Hoxd9_MA0913.1	10	0	-	0	0	.
chr4	38179493	38179494	chr4:38179494:T:G	rs71606113	T	G	T	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr4	38290156	38290157	chr4:38290157:T:C	rs112484267	T	C	T	Hoxd9_MA0913.1	20	0	-	0	0	.
chr4	38596572	38596573	chr4:38596573:C:T	rs2637691	C	T	T	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr4	38801022	38801023	chr4:38801023:A:G	rs5743595	A	G	A	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr4	38925774	38925775	chr4:38925775:T:C	rs10155189	T	C	C	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr4	39045752	39045753	chr4:39045753:A:C	rs75816052	A	C	A	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr4	39264080	39264081	chr4:39264081:G:A	rs11096988	G	A	G	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr4	39308416	39308417	chr4:39308417:T:G	rs1051286562	T	G	T	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr4	39696182	39696183	chr4:39696183:A:G	rs7681867	A	G	G	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr4	39724152	39724153	chr4:39724153:G:A	rs13118375	G	A	G	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr4	39743307	39743308	chr4:39743308:A:G	rs302945	A	G	A	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr4	39812443	39812444	chr4:39812444:A:G	rs4974949	A	G	A	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr4	40275635	40275636	chr4:40275636:A:T	rs73229784	A	T	A	Hoxd9_MA0913.1	9	1	+	9.760171550280933	9.51635951314298	GCAATTAAAA
chr4	40284063	40284064	chr4:40284064:C:T	rs116774238	C	T	C	Hoxd9_MA0913.1	25	0	-	0	0	.
chr4	40547703	40547704	chr4:40547704:T:C	rs62304570	T	C	T	Hoxd9_MA0913.1	15	0	+	0	0	.
chr4	40557786	40557787	chr4:40557787:T:C	rs114721923	T	C	T	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr4	40723767	40723768	chr4:40723768:A:T	rs6447352	A	T	T	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr4	40818332	40818333	chr4:40818333:T:C	rs62303774	T	C	T	Hoxd9_MA0913.1	10	0	+	0	0	.
chr4	40905734	40905735	chr4:40905735:G:A	rs34356249	G	A	G	Hoxd9_MA0913.1	16	0	-	0	0	.
chr4	40910945	40910946	chr4:40910946:T:C	rs73810676	T	C	T	Hoxd9_MA0913.1	3	1	-	8.323343304007485	6.495724363512382	CCAATAAAAA
chr4	40939907	40939908	chr4:40939908:T:C	rs4631085	T	C	T	Hoxd9_MA0913.1	9	1	+	9.51635951314298	8.678133135028622	GCAATTAAAT
chr4	41319107	41319108	chr4:41319108:G:A	rs114799895	G	A	G	Hoxd9_MA0913.1	23	0	+	0	0	.
chr4	41418331	41418332	chr4:41418332:C:T	rs73232195	C	T	C	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr4	41568683	41568684	chr4:41568684:C:T	rs34218605	C	T	C	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr4	41629094	41629095	chr4:41629095:A:C	rs60333925	A	C	A	Hoxd9_MA0913.1	5	1	+	7.973723031895638	4.538921260526269	GCAGTAAAAA
chr4	41750550	41750551	chr4:41750551:C:T	rs113832611	C	T	C	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr4	41980746	41980747	chr4:41980747:G:A	rs2660337	G	A	A	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr4	42354992	42354993	chr4:42354993:C:T	rs3103200	C	T	T	Hoxd9_MA0913.1	10	0	+	0	0	.
chr4	42360264	42360265	chr4:42360265:C:T	rs148487236	C	T	C	Hoxd9_MA0913.1	24	0	+	0	0	.
chr4	42436982	42436983	chr4:42436983:A:T	rs62304290	A	T	A	Hoxd9_MA0913.1	10	0	-	0	0	.
chr4	42493096	42493097	chr4:42493097:T:C	rs116166436	T	C	T	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr4	42817724	42817725	chr4:42817725:A:T	rs76224837	A	T	A	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr4	43330325	43330326	chr4:43330326:G:C	rs17596240	G	C	C	Hoxd9_MA0913.1	15	0	-	0	0	.
chr4	43594202	43594203	chr4:43594203:C:A	rs4557296	C	A	A	Hoxd9_MA0913.1	13	0	-	0	0	.
chr4	43834637	43834638	chr4:43834638:A:G	rs68076680	A	G	A	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr4	44775187	44775188	chr4:44775188:G:A	rs7698973	G	A	G	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr4	44974282	44974283	chr4:44974283:C:T	rs1497005	C	T	C	Hoxd9_MA0913.1	27	0	+	0	0	.
chr4	45347154	45347155	chr4:45347155:G:A	rs4410564	G	A	G	Hoxd9_MA0913.1	29	0	+	0	0	.
chr4	45663012	45663013	chr4:45663013:G:C	rs2124682	G	C	C	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr4	46432999	46433000	chr4:46433000:A:C	rs1372470	A	C	A	Hoxd9_MA0913.1	4	1	-	9.168223885413955	5.8760896336389745	GTAATTAAAT
chr4	46896415	46896416	chr4:46896416:A:C	rs7678824	A	C	A	Hoxd9_MA0913.1	7	1	+	8.32301137036169	5.029164618643261	GCAATAAATA
chr4	46955764	46955765	chr4:46955765:C:T	rs7683472	C	T	T	Hoxd9_MA0913.1	11	0	+	0	0	.
chr4	47972312	47972313	chr4:47972313:A:G	rs1352391339	A	G	A	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr4	48022362	48022363	chr4:48022363:T:C	rs321622	T	C	T	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr4	48043454	48043455	chr4:48043455:C:T	rs1911668	C	T	C	Hoxd9_MA0913.1	14	0	+	0	0	.
chr4	48137734	48137735	chr4:48137735:T:C	rs2071027	T	C	T	Hoxd9_MA0913.1	11	0	-	0	0	.
chr4	48261923	48261924	chr4:48261924:G:T	rs10938526	G	T	G	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr4	48652182	48652183	chr4:48652183:G:A	rs149748620	G	A	G	Hoxd9_MA0913.1	11	0	+	0	0	.
chr4	52188334	52188335	chr4:52188335:G:T	rs13144012	G	T	A	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr4	52367131	52367132	chr4:52367132:C:G	rs6841896	C	G	G	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr4	52367218	52367219	chr4:52367219:G:A	rs959214	G	A	G	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr4	52372173	52372174	chr4:52372174:A:G	rs10866445	A	G	A	Hoxd9_MA0913.1	14	0	+	0	0	.
chr4	52407775	52407776	chr4:52407776:C:T	rs145358181	C	T	C	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr4	52566735	52566736	chr4:52566736:T:C	rs561457847	T	C	T	Hoxd9_MA0913.1	4	1	+	9.51635951314298	6.224225261367999	GCAATTAAAT
chr4	52566743	52566744	chr4:52566744:C:A	rs10022931	C	A	C	Hoxd9_MA0913.1	12	0	+	0	0	.
chr4	52681075	52681076	chr4:52681076:A:C	rs368650649	A	C	A	Hoxd9_MA0913.1	24	0	+	0	0	.
chr4	52741368	52741369	chr4:52741369:A:C	rs7376024	A	C	C	Hoxd9_MA0913.1	4	1	-	9.453206344661718	6.161072092886739	GTAATAAAAA
chr4	52958245	52958246	chr4:52958246:G:A	rs7658537	G	A	G	Hoxd9_MA0913.1	1	1	-	8.2283733949328	7.880237767203775	GCAATAAAGA
chr4	53118816	53118817	chr4:53118817:C:T	rs66506011	C	T	C	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr4	53420053	53420054	chr4:53420054:C:G	rs28403386	C	G	C	Hoxd9_MA0913.1	15	0	+	0	0	.
chr4	53498505	53498506	chr4:53498506:T:C	rs2292578	T	C	T	Hoxd9_MA0913.1	4	1	+	8.287725110553424	4.995590858778444	GTCATAAAAT
chr4	53543939	53543940	chr4:53543940:G:A	chr4:53543940:G:A	G	A	G	Hoxd9_MA0913.1	20	0	+	0	0	.
chr4	53608787	53608788	chr4:53608788:A:C	rs2590798	A	C	A	Hoxd9_MA0913.1	11	0	+	0	0	.
chr4	53906945	53906946	chr4:53906946:A:T	rs7680876	A	T	A	Hoxd9_MA0913.1	25	0	+	0	0	.
chr4	53998099	53998100	chr4:53998100:A:G	rs539703047	A	G	A	Hoxd9_MA0913.1	14	0	+	0	0	.
chr4	54683185	54683186	chr4:54683186:T:C	rs2855774	T	C	T	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr4	54950832	54950833	chr4:54950833:T:C	rs77033262	T	C	T	Hoxd9_MA0913.1	22	0	+	0	0	.
chr4	55296204	55296205	chr4:55296205:T:G	rs7669110	T	G	G	Hoxd9_MA0913.1	27	0	-	0	0	.
chr4	55379469	55379470	chr4:55379470:T:C	rs861029	T	C	T	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr4	55470265	55470266	chr4:55470266:C:T	rs12644948	C	T	T	Hoxd9_MA0913.1	10	0	-	0	0	.
chr4	55475739	55475740	chr4:55475740:A:T	rs6828474	A	T	A	Hoxd9_MA0913.1	16	0	+	0	0	.
chr4	56276674	56276675	chr4:56276675:A:G	rs480702	A	G	G	Hoxd9_MA0913.1	22	0	+	0	0	.
chr4	56389174	56389175	chr4:56389175:G:A	rs79592955	G	A	A	Hoxd9_MA0913.1	0	1	+	9.801341972390743	8.853608248980283	GCAATAAAAA
chr4	56414220	56414221	chr4:56414221:C:T	rs114308856	C	T	C	Hoxd9_MA0913.1	23	0	-	0	0	.
chr4	56622358	56622359	chr4:56622359:C:T	rs28621960	C	T	C	Hoxd9_MA0913.1	15	0	+	0	0	.
chr4	56637253	56637254	chr4:56637254:T:G	rs73240571	T	G	T	Hoxd9_MA0913.1	8	1	-	8.879672775420401	6.88000913576786	GCCATAAAAA
chr4	56803768	56803769	chr4:56803769:A:G	rs74632226	A	G	A	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr4	56910348	56910349	chr4:56910349:G:A	rs35055952	G	A	G	Hoxd9_MA0913.1	19	0	+	0	0	.
chr4	57504838	57504839	chr4:57504839:G:C	rs71601701	G	C	G	Hoxd9_MA0913.1	28	0	-	0	0	.
chr4	57504870	57504871	chr4:57504871:T:C	rs68172346	T	C	T	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr4	57789756	57789757	chr4:57789757:A:G	rs1396813	A	G	A	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr4	57894701	57894702	chr4:57894702:G:A	rs3910147	G	A	A	Hoxd9_MA0913.1	22	0	+	0	0	.
chr4	58757732	58757733	chr4:58757733:A:T	rs78516523	A	T	A	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr4	58773542	58773543	chr4:58773543:C:A	rs181803147	C	A	C	Hoxd9_MA0913.1	0	1	-	9.760171550280933	6.723028854328064	GCAATTAAAA
chr4	58773543	58773544	chr4:58773544:G:A	rs12511119	G	A	A	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr4	59222453	59222454	chr4:59222454:G:T	rs964384	G	T	G	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr4	59222464	59222465	chr4:59222465:G:T	rs113480508	G	T	G	Hoxd9_MA0913.1	2	1	+	8.082713108822833	3.30982751843015	GCGATTAAAA
chr4	59388382	59388383	chr4:59388383:T:G	rs925422	T	G	T	Hoxd9_MA0913.1	24	0	+	0	0	.
chr4	59572119	59572120	chr4:59572120:A:G	rs67098781	A	G	A	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr4	59851800	59851801	chr4:59851801:A:G	rs10015134	A	G	G	Hoxd9_MA0913.1	8	1	+	9.412035922551908	7.839067345093966	GTAATTAAAA
chr4	60249523	60249524	chr4:60249524:C:T	rs28507317	C	T	C	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr4	60314391	60314392	chr4:60314392:G:A	rs73822515	G	A	G	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr4	60617970	60617971	chr4:60617971:T:C	rs1289181101	T	C	T	Hoxd9_MA0913.1	21	0	+	0	0	.
chr4	60884684	60884685	chr4:60884685:C:T	rs62313282	C	T	C	Hoxd9_MA0913.1	20	0	+	0	0	.
chr4	62710017	62710018	chr4:62710018:C:T	rs142682454	C	T	C	Hoxd9_MA0913.1	1	1	+	8.853608248980283	8.505472621251258	ACAATAAAAA
chr4	62844115	62844116	chr4:62844116:G:A	rs114745165	G	A	G	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr4	64359272	64359273	chr4:64359273:T:C	rs11734131	T	C	C	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr4	64520043	64520044	chr4:64520044:A:G	rs6551832	A	G	A	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr4	64520049	64520050	chr4:64520050:T:C	rs6551833	T	C	T	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr4	64617869	64617870	chr4:64617870:C:T	rs76333261	C	T	C	Hoxd9_MA0913.1	28	0	-	0	0	.
chr4	64954010	64954011	chr4:64954011:T:A	rs1837655	T	A	T	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr4	65435163	65435164	chr4:65435164:C:A	rs4507418	C	A	C	Hoxd9_MA0913.1	22	0	-	0	0	.
chr4	65508316	65508317	chr4:65508317:A:G	rs58710076	A	G	A	Hoxd9_MA0913.1	24	0	+	0	0	.
chr4	65508343	65508344	chr4:65508344:C:T	rs112254133	C	T	C	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr4	65590878	65590879	chr4:65590879:A:G	rs4566704	A	G	A	Hoxd9_MA0913.1	9	1	+	8.812437826870472	7.34594448610098	ACAATTAAAA
chr4	65623682	65623683	chr4:65623683:G:C	rs748089518	G	C	G	Hoxd9_MA0913.1	16	0	+	0	0	.
chr4	66265884	66265885	chr4:66265885:G:T	rs168116	G	T	T	Hoxd9_MA0913.1	22	0	+	0	0	.
chr4	67000985	67000986	chr4:67000986:T:A	rs13106782	T	A	T	Hoxd9_MA0913.1	11	0	-	0	0	.
chr4	67029187	67029188	chr4:67029188:A:G	rs11736356	A	G	G	Hoxd9_MA0913.1	24	0	-	0	0	.
chr4	67988650	67988651	chr4:67988651:T:A	rs79686685	T	A	T	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr4	68031244	68031245	chr4:68031245:C:T	rs113993089	C	T	N	Hoxd9_MA0913.1	1	1	+	8.082713108822833	7.73457748109381	GCGATTAAAA
chr4	68416660	68416661	chr4:68416661:T:C	rs58246549	T	C	t	Hoxd9_MA0913.1	23	0	-	0	0	.
chr4	69450727	69450728	chr4:69450728:T:A	rs2736477	T	A	t	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr4	69748540	69748541	chr4:69748541:G:A	rs1604747	G	A	A	Hoxd9_MA0913.1	15	0	+	0	0	.
chr4	69764332	69764333	chr4:69764333:T:C	rs79047498	T	C	T	Hoxd9_MA0913.1	4	1	+	9.453206344661718	6.161072092886739	GTAATAAAAA
chr4	69858988	69858989	chr4:69858989:G:T	rs11573744	G	T	G	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr4	70759330	70759331	chr4:70759331:G:T	rs61440043	G	T	G	Hoxd9_MA0913.1	19	0	-	0	0	.
chr4	70927648	70927649	chr4:70927649:T:C	rs6819580	T	C	c	Hoxd9_MA0913.1	14	0	-	0	0	.
chr4	70927667	70927668	chr4:70927668:A:T	rs9991925	A	T	A	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr4	71526288	71526289	chr4:71526289:G:T	rs34973757	G	T	G	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr4	71526315	71526316	chr4:71526316:A:G	rs1453446	A	G	A	Hoxd9_MA0913.1	17	0	+	0	0	.
chr4	71563653	71563654	chr4:71563654:G:A	rs2290399	G	A	A	Hoxd9_MA0913.1	13	0	+	0	0	.
chr4	71860815	71860816	chr4:71860816:A:C	rs112236116	A	C	.	Hoxd9_MA0913.1	13	0	-	0	0	.
chr4	71879549	71879550	chr4:71879550:G:A	rs17767445	G	A	.	Hoxd9_MA0913.1	25	0	-	0	0	.
chr4	72468952	72468953	chr4:72468953:T:C	rs7436538	T	C	T	Hoxd9_MA0913.1	29	0	+	0	0	.
chr4	72557360	72557361	chr4:72557361:T:G	rs2623532	T	G	G	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr4	72557406	72557407	chr4:72557407:C:T	rs7689931	C	T	C	Hoxd9_MA0913.1	27	0	+	0	0	.
chr4	72809439	72809440	chr4:72809440:A:G	rs1114360	A	G	A	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr4	72828793	72828794	chr4:72828794:T:C	rs315337	T	C	T	Hoxd9_MA0913.1	4	1	+	8.531537147691377	5.239402895916397	GTCATAAAAA
chr4	73528685	73528686	chr4:73528686:A:T	rs6856952	A	T	T	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr4	73606226	73606227	chr4:73606227:T:C	rs1957660	T	C	T	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr4	73609376	73609377	chr4:73609377:A:T	rs1745289	A	T	A	Hoxd9_MA0913.1	13	0	+	0	0	.
chr4	73895810	73895811	chr4:73895811:G:A	rs16850178	G	A	G	Hoxd9_MA0913.1	18	0	+	0	0	.
chr4	73951377	73951378	chr4:73951378:A:G	rs4399951	A	G	A	Hoxd9_MA0913.1	13	0	-	0	0	.
chr4	74358872	74358873	chr4:74358873:T:C	rs1350666	T	C	T	Hoxd9_MA0913.1	5	1	-	8.719303557138431	2.4976404042425617	GCAATAAAAC
chr4	74402689	74402690	chr4:74402690:T:C	rs1494882	T	C	T	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr4	74495366	74495367	chr4:74495367:T:A	rs116338329	T	A	T	Hoxd9_MA0913.1	14	0	-	0	0	.
chr4	74743123	74743124	chr4:74743124:T:C	rs7667014	T	C	C	Hoxd9_MA0913.1	29	0	+	0	0	.
chr4	74936756	74936757	chr4:74936757:G:A	rs17248887	G	A	A	Hoxd9_MA0913.1	17	0	-	0	0	.
chr4	75509141	75509142	chr4:75509142:T:A	rs2306177	T	A	T	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr4	75844555	75844556	chr4:75844556:T:C	rs140517617	T	C	T	Hoxd9_MA0913.1	11	0	+	0	0	.
chr4	76198536	76198537	chr4:76198537:A:T	rs1174093833	A	T	A	Hoxd9_MA0913.1	0	1	+	8.853608248980283	6.764199276437873	ACAATAAAAA
chr4	76234039	76234040	chr4:76234040:A:C	rs6814385	A	C	C	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr4	76237194	76237195	chr4:76237195:A:G	rs35177915	A	G	G	Hoxd9_MA0913.1	3	1	+	8.635860738282448	6.8082417977873435	GCCATAAAAT
chr4	76238727	76238728	chr4:76238728:G:A	rs1441919	G	A	G	Hoxd9_MA0913.1	25	0	-	0	0	.
chr4	76378197	76378198	chr4:76378198:C:T	rs10027750	C	T	C	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr4	76526688	76526689	chr4:76526689:A:G	chr4:76526689:A:G	A	G	A	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr4	76856433	76856434	chr4:76856434:C:A	rs17002265	C	A	A	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr4	76894391	76894392	chr4:76894392:T:C	rs4859725	T	C	C	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr4	76895075	76895076	chr4:76895076:A:G	rs2645673	A	G	G	Hoxd9_MA0913.1	5	1	-	8.812437826870472	5.418806477610913	ACAATTAAAA
chr4	77010744	77010745	chr4:77010745:T:C	rs148491264	T	C	T	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr4	77047192	77047193	chr4:77047193:A:G	rs7810	A	G	A	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr4	77348105	77348106	chr4:77348106:C:T	rs11930470	C	T	C	Hoxd9_MA0913.1	27	0	+	0	0	.
chr4	77381623	77381624	chr4:77381624:A:G	rs28711853	A	G	G	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr4	77670276	77670277	chr4:77670277:A:C	rs7681197	A	C	C	Hoxd9_MA0913.1	28	0	+	0	0	.
chr4	78099842	78099843	chr4:78099843:A:G	rs17002937	A	G	A	Hoxd9_MA0913.1	4	1	-	8.371167929409406	5.079033677634427	GTAATAAAAC
chr4	78507130	78507131	chr4:78507131:G:A	rs35702927	G	A	A	Hoxd9_MA0913.1	14	0	-	0	0	.
chr4	78519947	78519948	chr4:78519948:A:C	rs17470609	A	C	A	Hoxd9_MA0913.1	5	1	-	8.293678209511443	2.1131854787253816	GCAATTAAAG
chr4	78650741	78650742	chr4:78650742:C:T	rs909812457	C	T	C	Hoxd9_MA0913.1	24	0	-	0	0	.
chr4	78829543	78829544	chr4:78829544:G:A	rs10018189	G	A	A	Hoxd9_MA0913.1	21	0	-	0	0	.
chr4	79227860	79227861	chr4:79227861:A:C	rs4425403	A	C	A	Hoxd9_MA0913.1	16	0	+	0	0	.
chr4	79357615	79357616	chr4:79357616:C:T	rs17003719	C	T	C	Hoxd9_MA0913.1	13	0	+	0	0	.
chr4	79528585	79528586	chr4:79528586:A:G	rs186103684	A	G	A	Hoxd9_MA0913.1	16	0	-	0	0	.
chr4	79653087	79653088	chr4:79653088:C:T	rs12503047	C	T	C	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr4	79980559	79980560	chr4:79980560:A:G	rs13138469	A	G	A	Hoxd9_MA0913.1	13	0	+	0	0	.
chr4	80095034	80095035	chr4:80095035:T:C	rs74883679	T	C	T	Hoxd9_MA0913.1	5	1	+	8.812437826870472	5.418806477610913	ACAATTAAAA
chr4	80180728	80180729	chr4:80180729:C:G	rs72656511	C	G	C	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr4	80264182	80264183	chr4:80264183:C:T	rs569856778	C	T	C	Hoxd9_MA0913.1	13	0	-	0	0	.
chr4	80310556	80310557	chr4:80310557:T:A	rs13152129	T	A	A	Hoxd9_MA0913.1	17	0	-	0	0	.
chr4	80529304	80529305	chr4:80529305:G:T	rs17004931	G	T	G	Hoxd9_MA0913.1	27	0	+	0	0	.
chr4	81212088	81212089	chr4:81212089:T:C	rs710838	T	C	C	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr4	81212109	81212110	chr4:81212110:C:A	rs989445	C	A	C	Hoxd9_MA0913.1	14	0	+	0	0	.
chr4	81212115	81212116	chr4:81212116:A:C	rs56123401	A	C	A	Hoxd9_MA0913.1	20	0	+	0	0	.
chr4	81296377	81296378	chr4:81296378:T:G	rs10488935	T	G	G	Hoxd9_MA0913.1	28	0	-	0	0	.
chr4	81348914	81348915	chr4:81348915:G:A	rs11731567	G	A	A	Hoxd9_MA0913.1	18	0	-	0	0	.
chr4	81406218	81406219	chr4:81406219:T:G	rs556548344	T	G	T	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr4	81406234	81406235	chr4:81406235:T:C	rs184795199	T	C	T	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr4	81406262	81406263	chr4:81406263:T:G	rs740936	T	G	T	Hoxd9_MA0913.1	26	0	+	0	0	.
chr4	81437205	81437206	chr4:81437206:G:A	rs60314010	G	A	G	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr4	81846021	81846022	chr4:81846022:G:A	rs7653998	G	A	G	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr4	81991309	81991310	chr4:81991310:A:G	rs1867338	A	G	G	Hoxd9_MA0913.1	27	0	-	0	0	.
chr4	82346594	82346595	chr4:82346595:G:A	rs13125219	G	A	G	Hoxd9_MA0913.1	25	0	+	0	0	.
chr4	82346598	82346599	chr4:82346599:G:A	rs13125220	G	A	G	Hoxd9_MA0913.1	29	0	+	0	0	.
chr4	82525351	82525352	chr4:82525352:C:T	rs17005759	C	T	T	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr4	82635345	82635346	chr4:82635346:A:G	rs6832564	A	G	G	Hoxd9_MA0913.1	28	0	+	0	0	.
chr4	82773242	82773243	chr4:82773243:C:T	rs552626363	C	T	c	Hoxd9_MA0913.1	29	0	-	0	0	.
chr4	82809944	82809945	chr4:82809945:G:T	rs10034593	G	T	G	Hoxd9_MA0913.1	18	0	-	0	0	.
chr4	82856440	82856441	chr4:82856441:G:A	rs12504685	G	A	G	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr4	82899016	82899017	chr4:82899017:G:A	rs4302451	G	A	A	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr4	83034758	83034759	chr4:83034759:A:G	rs4693546	A	G	G	Hoxd9_MA0913.1	16	0	-	0	0	.
chr4	83085543	83085544	chr4:83085544:A:G	rs57364887	A	G	A	Hoxd9_MA0913.1	21	0	+	0	0	.
chr4	83269595	83269596	chr4:83269596:A:G	rs6535453	A	G	G	Hoxd9_MA0913.1	21	0	-	0	0	.
chr4	83285679	83285680	chr4:83285680:G:A	rs191703590	G	A	G	Hoxd9_MA0913.1	17	0	+	0	0	.
chr4	83611040	83611041	chr4:83611041:C:G	rs6819877	C	G	C	Hoxd9_MA0913.1	24	0	-	0	0	.
chr4	83645003	83645004	chr4:83645004:A:G	rs182012333	A	G	A	Hoxd9_MA0913.1	3	1	+	8.334848631621252	6.507229691126146	GCAATAAAAG
chr4	83905745	83905746	chr4:83905746:A:C	rs4693657	A	C	A	Hoxd9_MA0913.1	21	0	-	0	0	.
chr4	84719437	84719438	chr4:84719438:A:G	rs10516727	A	G	A	Hoxd9_MA0913.1	3	1	+	9.51635951314298	7.688740572647875	GCAATTAAAT
chr4	84977587	84977588	chr4:84977588:G:A	rs4590017	G	A	G	Hoxd9_MA0913.1	22	0	+	0	0	.
chr4	85127199	85127200	chr4:85127200:T:G	rs6811593	T	G	T	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr4	85127232	85127233	chr4:85127233:A:G	rs6531791	A	G	G	Hoxd9_MA0913.1	22	0	+	0	0	.
chr4	85763379	85763380	chr4:85763380:C:G	rs140378354	C	G	C	Hoxd9_MA0913.1	10	0	+	0	0	.
chr4	85808018	85808019	chr4:85808019:A:G	rs12500124	A	G	A	Hoxd9_MA0913.1	1	1	-	9.453206344661718	9.801341972390743	GTAATAAAAA
chr4	86174820	86174821	chr4:86174821:T:A	rs1903361	T	A	T	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr4	87067437	87067438	chr4:87067438:C:T	rs2280953	C	T	C	Hoxd9_MA0913.1	14	0	+	0	0	.
chr4	87425834	87425835	chr4:87425835:A:T	rs6816562	A	T	T	Hoxd9_MA0913.1	5	1	-	9.760171550280933	9.801341972390743	GCAATTAAAA
chr4	87425835	87425836	chr4:87425836:A:C	rs6816563	A	C	C	Hoxd9_MA0913.1	4	1	-	9.760171550280933	6.468037298505953	GCAATTAAAA
chr4	87679229	87679230	chr4:87679230:T:G	rs62316003	T	G	T	Hoxd9_MA0913.1	18	0	-	0	0	.
chr4	87807040	87807041	chr4:87807041:C:T	rs9993794	C	T	C	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr4	87822388	87822389	chr4:87822389:G:A	rs11734956	G	A	G	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr4	87839407	87839408	chr4:87839408:G:A	rs73840165	G	A	A	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr4	88211832	88211833	chr4:88211833:T:C	rs149736927	T	C	T	Hoxd9_MA0913.1	8	1	+	8.32301137036169	7.801678332738202	GCAATAAATA
chr4	89022321	89022322	chr4:89022322:C:G	rs1795721	C	G	G	Hoxd9_MA0913.1	20	0	+	0	0	.
chr4	89070380	89070381	chr4:89070381:G:C	rs5026462	G	C	G	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr4	89290627	89290628	chr4:89290628:T:C	rs2005104	T	C	T	Hoxd9_MA0913.1	28	0	-	0	0	.
chr4	89469365	89469366	chr4:89469366:G:C	rs28836900	G	C	G	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr4	89520292	89520293	chr4:89520293:G:T	rs7660434	G	T	T	Hoxd9_MA0913.1	27	0	+	0	0	.
chr4	89709855	89709856	chr4:89709856:C:T	rs78565744	C	T	C	Hoxd9_MA0913.1	25	0	+	0	0	.
chr4	89752866	89752867	chr4:89752867:A:C	rs34194714	A	C	A	Hoxd9_MA0913.1	8	1	+	8.287725110553424	6.2880614709008835	GTCATAAAAT
chr4	89838404	89838405	chr4:89838405:C:T	rs3806789	C	T	C	Hoxd9_MA0913.1	22	0	-	0	0	.
chr4	89975497	89975498	chr4:89975498:C:A	rs2120371	C	A	A	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr4	90025396	90025397	chr4:90025397:T:C	rs7671006	T	C	C	Hoxd9_MA0913.1	6	1	-	8.853608248980283	2.0381875812009422	ACAATAAAAA
chr4	90025413	90025414	chr4:90025414:T:C	rs114120673	T	C	T	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr4	90076203	90076204	chr4:90076204:G:C	rs12649987	G	C	G	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr4	90774767	90774768	chr4:90774768:T:C	rs7664025	T	C	.	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr4	90791972	90791973	chr4:90791973:A:G	rs12498622	A	G	A	Hoxd9_MA0913.1	4	1	-	7.984561357794846	4.692427106019867	GCAATAAAGT
chr4	90950384	90950385	chr4:90950385:C:T	rs11728310	C	T	C	Hoxd9_MA0913.1	0	1	-	9.453206344661718	8.505472621251258	GTAATAAAAA
chr4	90951279	90951280	chr4:90951280:G:A	rs1947442	G	A	A	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr4	92992894	92992895	chr4:92992895:G:T	rs150920962	G	T	G	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr4	93217737	93217738	chr4:93217738:A:G	chr4:93217738:A:G	A	G	A	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr4	93352679	93352680	chr4:93352680:T:A	rs1433659	T	A	T	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr4	93463190	93463191	chr4:93463191:C:G	rs75339992	C	G	C	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr4	93646319	93646320	chr4:93646320:A:G	rs6836410	A	G	A	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr4	94364470	94364471	chr4:94364471:G:A	rs17377118	G	A	G	Hoxd9_MA0913.1	14	0	-	0	0	.
chr4	94382320	94382321	chr4:94382321:G:A	rs13126976	G	A	G	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr4	94407098	94407099	chr4:94407099:C:T	rs17378021	C	T	C	Hoxd9_MA0913.1	0	1	-	9.801341972390743	8.853608248980283	GCAATAAAAA
chr4	94623566	94623567	chr4:94623567:A:G	rs6853490	A	G	A	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr4	94737523	94737524	chr4:94737524:C:T	rs1266332114	C	T	C	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr4	94760107	94760108	chr4:94760108:T:C	rs536138372	T	C	T	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr4	94828971	94828972	chr4:94828972:T:A	rs78701012	T	A	T	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr4	94829010	94829011	chr4:94829011:A:G	rs17500351	A	G	A	Hoxd9_MA0913.1	27	0	+	0	0	.
chr4	94943793	94943794	chr4:94943794:A:G	rs13127704	A	G	G	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr4	95213687	95213688	chr4:95213688:T:G	rs1865378	T	G	G	Hoxd9_MA0913.1	10	0	+	0	0	.
chr4	95251186	95251187	chr4:95251187:G:A	rs35351957	G	A	A	Hoxd9_MA0913.1	22	0	+	0	0	.
chr4	95363406	95363407	chr4:95363407:A:C	rs79234344	A	C	A	Hoxd9_MA0913.1	19	0	-	0	0	.
chr4	95363432	95363433	chr4:95363433:A:G	rs2626045	A	G	G	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr4	95458074	95458075	chr4:95458075:C:T	rs265039	C	T	T	Hoxd9_MA0913.1	25	0	-	0	0	.
chr4	95627061	95627062	chr4:95627062:A:C	rs35403357	A	C	A	Hoxd9_MA0913.1	13	0	+	0	0	.
chr4	95640372	95640373	chr4:95640373:A:G	rs78732903	A	G	A	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr4	95640376	95640377	chr4:95640377:G:C	rs13138930	G	C	C	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr4	95730078	95730079	chr4:95730079:T:G	rs10212842	T	G	G	Hoxd9_MA0913.1	10	0	-	0	0	.
chr4	95831425	95831426	chr4:95831426:G:A	rs13107217	G	A	G	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr4	96371163	96371164	chr4:96371164:C:T	rs146831104	C	T	C	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr4	96647782	96647783	chr4:96647783:G:A	rs4699531	G	A	A	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr4	96816125	96816126	chr4:96816126:A:G	rs66869144	A	G	A	Hoxd9_MA0913.1	27	0	-	0	0	.
chr4	97016996	97016997	chr4:97016997:A:G	rs2865773	A	G	G	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr4	97070918	97070919	chr4:97070919:A:T	rs28691197	A	T	A	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr4	97159878	97159879	chr4:97159879:T:C	rs11936576	T	C	C	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr4	97183679	97183680	chr4:97183680:G:T	rs11930739	G	T	T	Hoxd9_MA0913.1	24	0	-	0	0	.
chr4	97276717	97276718	chr4:97276718:C:T	rs148917524	C	T	C	Hoxd9_MA0913.1	16	0	+	0	0	.
chr4	97349977	97349978	chr4:97349978:A:T	rs35436423	A	T	A	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr4	97757095	97757096	chr4:97757096:C:T	rs588851	C	T	T	Hoxd9_MA0913.1	26	0	+	0	0	.
chr4	98467701	98467702	chr4:98467702:A:G	rs17027603	A	G	G	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr4	98613383	98613384	chr4:98613384:A:G	rs4699660	A	G	A	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr4	98629102	98629103	chr4:98629103:T:C	rs6832517	T	C	C	Hoxd9_MA0913.1	23	0	+	0	0	.
chr4	99059967	99059968	chr4:99059968:T:G	rs187850813	T	G	T	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr4	99060653	99060654	chr4:99060654:C:T	rs76088669	C	T	C	Hoxd9_MA0913.1	29	0	-	0	0	.
chr4	99060671	99060672	chr4:99060672:C:T	rs111390962	C	T	C	Hoxd9_MA0913.1	11	0	-	0	0	.
chr4	99372582	99372583	chr4:99372583:C:T	rs35302924	C	T	C	Hoxd9_MA0913.1	15	0	-	0	0	.
chr4	100287744	100287745	chr4:100287745:G:A	rs80229744	G	A	G	Hoxd9_MA0913.1	25	0	-	0	0	.
chr4	100970542	100970543	chr4:100970543:A:G	rs67405553	A	G	A	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr4	100979713	100979714	chr4:100979714:C:T	rs12511064	C	T	C	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr4	101192270	101192271	chr4:101192271:A:C	chr4:101192271:A:C	A	C	A	Hoxd9_MA0913.1	27	0	+	0	0	.
chr4	101419249	101419250	chr4:101419250:A:G	rs75339186	A	G	A	Hoxd9_MA0913.1	24	0	-	0	0	.
chr4	101753531	101753532	chr4:101753532:C:G	rs7674411	C	G	t	Hoxd9_MA0913.1	9	1	-	8.334848631621252	8.719303557138431	GCAATAAAAG
chr4	101955178	101955179	chr4:101955179:C:T	rs2276334	C	T	C	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr4	101955186	101955187	chr4:101955187:C:T	rs2276333	C	T	C	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr4	102263456	102263457	chr4:102263457:C:T	rs58928104	C	T	C	Hoxd9_MA0913.1	8	1	-	7.984561357794846	9.55752993525279	GCAATAAAGT
chr4	102346640	102346641	chr4:102346641:A:T	rs4557261	A	T	T	Hoxd9_MA0913.1	14	0	+	0	0	.
chr4	102388597	102388598	chr4:102388598:G:A	rs1462952	G	A	A	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr4	102624980	102624981	chr4:102624981:T:C	rs62327181	T	C	T	Hoxd9_MA0913.1	9	1	+	8.287725110553424	7.449498732439066	GTCATAAAAT
chr4	102799708	102799709	chr4:102799709:G:C	rs3774987	G	C	C	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr4	104025363	104025364	chr4:104025364:G:A	rs1501277	G	A	A	Hoxd9_MA0913.1	14	0	+	0	0	.
chr4	105294212	105294213	chr4:105294213:T:A	rs2647228	T	A	T	Hoxd9_MA0913.1	9	1	+	8.287725110553424	8.531537147691377	GTCATAAAAT
chr4	105543827	105543828	chr4:105543828:G:A	rs2158202	G	A	G	Hoxd9_MA0913.1	0	1	+	8.879672775420401	7.931939052009941	GCCATAAAAA
chr4	105632206	105632207	chr4:105632207:G:C	rs1447093	G	C	C	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr4	105821058	105821059	chr4:105821059:T:C	rs17036292	T	C	T	Hoxd9_MA0913.1	23	0	-	0	0	.
chr4	105978680	105978681	chr4:105978681:T:C	rs11097908	T	C	T	Hoxd9_MA0913.1	21	0	-	0	0	.
chr4	105978716	105978717	chr4:105978717:T:C	rs7662283	T	C	T	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr4	106062691	106062692	chr4:106062692:T:A	rs1011956993	T	A	T	Hoxd9_MA0913.1	19	0	+	0	0	.
chr4	106183541	106183542	chr4:106183542:T:C	rs6843870	T	C	T	Hoxd9_MA0913.1	15	0	-	0	0	.
chr4	106503467	106503468	chr4:106503468:C:T	rs79868235	C	T	C	Hoxd9_MA0913.1	23	0	+	0	0	.
chr4	106584390	106584391	chr4:106584391:T:G	rs17292661	T	G	T	Hoxd9_MA0913.1	5	1	+	7.932552609785828	1.7520598789997708	GCAGTTAAAA
chr4	106616232	106616233	chr4:106616233:A:G	rs1023792	A	G	A	Hoxd9_MA0913.1	4	1	-	8.334848631621252	5.042714379846271	GCAATAAAAG
chr4	107932691	107932692	chr4:107932692:G:A	rs9995856	G	A	G	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr4	108211513	108211514	chr4:108211514:G:A	rs79970828	G	A	G	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr4	108446748	108446749	chr4:108446749:G:C	rs147609497	G	C	G	Hoxd9_MA0913.1	16	0	+	0	0	.
chr4	108874046	108874047	chr4:108874047:C:A	rs935911	C	A	A	Hoxd9_MA0913.1	10	0	+	0	0	.
chr4	108988370	108988371	chr4:108988371:A:C	rs2113971	A	C	A	Hoxd9_MA0913.1	14	0	+	0	0	.
chr4	109000415	109000416	chr4:109000416:C:T	rs9999788	C	T	T	Hoxd9_MA0913.1	29	0	-	0	0	.
chr4	109113639	109113640	chr4:109113640:C:T	rs55810387	C	T	C	Hoxd9_MA0913.1	13	0	+	0	0	.
chr4	109638025	109638026	chr4:109638026:T:A	rs11947977	T	A	T	Hoxd9_MA0913.1	26	0	+	0	0	.
chr4	109700970	109700971	chr4:109700971:C:T	rs5030535	C	T	T	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr4	109910119	109910120	chr4:109910120:A:G	rs3756267	A	G	A	Hoxd9_MA0913.1	29	0	-	0	0	.
chr4	110139338	110139339	chr4:110139339:A:G	rs35757511	A	G	A	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr4	110139354	110139355	chr4:110139355:C:T	rs28722886	C	T	A	Hoxd9_MA0913.1	1	1	+	8.123883530932645	7.775747903203619	GCGATAAAAA
chr4	110295430	110295431	chr4:110295431:G:T	rs244052	G	T	T	Hoxd9_MA0913.1	1	1	-	7.75646393805828	5.336645562033021	GCCATTAAAC
chr4	110396481	110396482	chr4:110396482:G:A	rs34817391	G	A	G	Hoxd9_MA0913.1	2	1	-	8.635860738282448	3.1071859034020073	GCCATAAAAT
chr4	110586471	110586472	chr4:110586472:A:G	rs1322297331	A	G	A	Hoxd9_MA0913.1	27	0	-	0	0	.
chr4	110787281	110787282	chr4:110787282:A:G	rs7434417	A	G	A	Hoxd9_MA0913.1	4	1	-	7.932552609785828	4.64041835801085	GCAGTTAAAA
chr4	110954102	110954103	chr4:110954103:G:A	rs10004398	G	A	A	Hoxd9_MA0913.1	22	0	-	0	0	.
chr4	111502870	111502871	chr4:111502871:A:G	rs1503650	A	G	A	Hoxd9_MA0913.1	5	1	+	9.55752993525279	3.3358667823569204	GCAATAAAAT
chr4	111631006	111631007	chr4:111631007:T:C	rs78541353	T	C	T	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr4	111992576	111992577	chr4:111992577:A:C	rs4834118	A	C	C	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr4	112073590	112073591	chr4:112073591:T:C	rs12510220	T	C	T	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr4	112277648	112277649	chr4:112277649:G:C	rs701758	G	C	C	Hoxd9_MA0913.1	3	1	+	7.932552609785828	5.293940879880877	GCAGTTAAAA
chr4	112453837	112453838	chr4:112453838:C:A	rs62314690	C	A	A	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr4	112674471	112674472	chr4:112674472:T:A	rs143806836	T	A	T	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr4	112707449	112707450	chr4:112707450:T:C	rs4555714	T	C	T	Hoxd9_MA0913.1	21	0	-	0	0	.
chr4	113003980	113003981	chr4:113003981:A:G	rs6851571	A	G	A	Hoxd9_MA0913.1	11	0	+	0	0	.
chr4	113069649	113069650	chr4:113069650:G:T	rs602125	G	T	T	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr4	113069651	113069652	chr4:113069652:T:C	rs62314901	T	C	T	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr4	113070764	113070765	chr4:113070765:G:C	rs7692578	G	C	G	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr4	113074210	113074211	chr4:113074211:A:G	rs13149330	A	G	A	Hoxd9_MA0913.1	24	0	-	0	0	.
chr4	113074212	113074213	chr4:113074213:C:T	rs77363045	C	T	C	Hoxd9_MA0913.1	22	0	-	0	0	.
chr4	113109423	113109424	chr4:113109424:G:A	rs7679106	G	A	G	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr4	113154059	113154060	chr4:113154060:A:G	rs10516592	A	G	A	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr4	113292924	113292925	chr4:113292925:G:A	rs78421612	G	A	G	Hoxd9_MA0913.1	10	0	+	0	0	.
chr4	113586309	113586310	chr4:113586310:A:G	rs10011229	A	G	G	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr4	113592383	113592384	chr4:113592384:T:C	rs993506	T	C	C	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr4	113820405	113820406	chr4:113820406:A:G	rs34182476	A	G	A	Hoxd9_MA0913.1	11	0	+	0	0	.
chr4	113823504	113823505	chr4:113823505:G:C	rs78662993	G	C	G	Hoxd9_MA0913.1	21	0	-	0	0	.
chr4	113823525	113823526	chr4:113823526:C:T	rs76532768	C	T	C	Hoxd9_MA0913.1	0	1	-	9.453206344661718	8.505472621251258	GTAATAAAAA
chr4	113836140	113836141	chr4:113836141:A:G	rs6846246	A	G	G	Hoxd9_MA0913.1	15	0	+	0	0	.
chr4	113837868	113837869	chr4:113837869:T:A	rs72905672	T	A	T	Hoxd9_MA0913.1	15	0	-	0	0	.
chr4	113999062	113999063	chr4:113999063:C:T	rs41518248	C	T	C	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr4	114100582	114100583	chr4:114100583:G:A	rs28522841	G	A	A	Hoxd9_MA0913.1	11	0	+	0	0	.
chr4	114314293	114314294	chr4:114314294:A:G	rs11724000	A	G	A	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr4	114603488	114603489	chr4:114603489:A:G	rs74519425	A	G	A	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr4	114659289	114659290	chr4:114659290:A:C	rs139235791	A	C	A	Hoxd9_MA0913.1	10	0	-	0	0	.
chr4	114866998	114866999	chr4:114866999:T:C	rs60799234	T	C	T	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr4	114930338	114930339	chr4:114930339:G:T	rs35423038	G	T	T	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr4	115101904	115101905	chr4:115101905:G:A	rs532923	G	A	G	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr4	115559011	115559012	chr4:115559012:C:T	rs6835463	C	T	C	Hoxd9_MA0913.1	27	0	+	0	0	.
chr4	116087228	116087229	chr4:116087229:C:T	rs72901601	C	T	C	Hoxd9_MA0913.1	0	1	-	7.984561357794846	7.0368276343843865	GCAATAAAGT
chr4	116981432	116981433	chr4:116981433:T:C	rs538192335	T	C	t	Hoxd9_MA0913.1	3	1	-	8.187202972822991	6.359584032327886	GCAATTAAGA
chr4	117325237	117325238	chr4:117325238:T:C	rs4561983	T	C	T	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr4	117325252	117325253	chr4:117325253:C:A	rs74870429	C	A	C	Hoxd9_MA0913.1	1	1	+	9.801341972390743	7.381523596365485	GCAATAAAAA
chr4	117420472	117420473	chr4:117420473:G:A	rs12648816	G	A	G	Hoxd9_MA0913.1	28	0	+	0	0	.
chr4	117483259	117483260	chr4:117483260:T:C	rs11725039	T	C	C	Hoxd9_MA0913.1	8	1	-	8.531537147691377	6.958568570233435	GTCATAAAAA
chr4	117491231	117491232	chr4:117491232:T:A	rs9993338	T	A	A	Hoxd9_MA0913.1	17	0	+	0	0	.
chr4	117604611	117604612	chr4:117604612:C:G	rs17867515	C	G	C	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr4	118328106	118328107	chr4:118328107:A:G	rs788654	A	G	G	Hoxd9_MA0913.1	13	0	+	0	0	.
chr4	118344932	118344933	chr4:118344933:C:T	rs78167655	C	T	C	Hoxd9_MA0913.1	10	0	-	0	0	.
chr4	118345808	118345809	chr4:118345809:T:C	rs1523743	T	C	T	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr4	118711524	118711525	chr4:118711525:T:C	rs428409	T	C	T	Hoxd9_MA0913.1	29	0	-	0	0	.
chr4	118973618	118973619	chr4:118973619:G:A	rs12502164	G	A	G	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr4	119117488	119117489	chr4:119117489:G:A	rs182937934	G	A	G	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr4	119189628	119189629	chr4:119189629:A:G	rs28452522	A	G	A	Hoxd9_MA0913.1	20	0	+	0	0	.
chr4	119206605	119206606	chr4:119206606:G:C	rs1397610	G	C	G	Hoxd9_MA0913.1	26	0	-	0	0	.
chr4	119369021	119369022	chr4:119369022:G:C	rs11735878	G	C	C	Hoxd9_MA0913.1	28	0	+	0	0	.
chr4	119591352	119591353	chr4:119591353:T:C	rs6842674	T	C	C	Hoxd9_MA0913.1	15	0	-	0	0	.
chr4	119622017	119622018	chr4:119622018:C:T	rs13136462	C	T	C	Hoxd9_MA0913.1	16	0	+	0	0	.
chr4	119666625	119666626	chr4:119666626:C:T	rs9994488	C	T	T	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr4	119725125	119725126	chr4:119725126:C:G	rs2389903	C	G	G	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr4	120067378	120067379	chr4:120067379:A:G	rs147765329	A	G	A	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr4	120070282	120070283	chr4:120070283:G:A	rs6817243	G	A	G	Hoxd9_MA0913.1	14	0	-	0	0	.
chr4	120156653	120156654	chr4:120156654:A:G	rs72668836	A	G	A	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr4	120305161	120305162	chr4:120305162:G:A	rs2715959	G	A	A	Hoxd9_MA0913.1	0	1	+	9.168223885413955	8.220490162003495	GTAATTAAAT
chr4	120653812	120653813	chr4:120653813:T:G	rs78084461	T	G	T	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr4	120923562	120923563	chr4:120923563:C:A	rs2278811	C	A	C	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr4	120923572	120923573	chr4:120923573:A:G	rs183879620	A	G	A	Hoxd9_MA0913.1	3	1	+	7.984561357794846	6.156942417299742	GCAATAAAGT
chr4	121008065	121008066	chr4:121008066:C:T	rs4484323	C	T	T	Hoxd9_MA0913.1	2	1	+	8.594690316172638	3.066015481292197	GCCATTAAAT
chr4	121307502	121307503	chr4:121307503:G:C	chr4:121307503:G:C	G	C	G	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr4	121675823	121675824	chr4:121675824:G:A	rs78165393	G	A	G	Hoxd9_MA0913.1	17	0	+	0	0	.
chr4	121677479	121677480	chr4:121677480:A:G	rs2306411	A	G	A	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr4	121719847	121719848	chr4:121719848:A:G	rs12508617	A	G	G	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr4	121777689	121777690	chr4:121777690:A:C	rs78041351	A	C	A	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr4	121940270	121940271	chr4:121940271:C:T	rs4833779	C	T	T	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr4	122968601	122968602	chr4:122968602:C:T	rs4833849	C	T	C	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr4	122992212	122992213	chr4:122992213:C:G	rs72677108	C	G	C	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr4	123010211	123010212	chr4:123010212:A:G	rs6534373	A	G	G	Hoxd9_MA0913.1	28	0	-	0	0	.
chr4	123249517	123249518	chr4:123249518:A:G	rs302508	A	G	G	Hoxd9_MA0913.1	17	0	+	0	0	.
chr4	123298904	123298905	chr4:123298905:A:C	rs1500122	A	C	A	Hoxd9_MA0913.1	24	0	-	0	0	.
chr4	123421787	123421788	chr4:123421788:T:A	rs28477361	T	A	T	Hoxd9_MA0913.1	16	0	+	0	0	.
chr4	123444494	123444495	chr4:123444495:G:A	rs190634585	G	A	G	Hoxd9_MA0913.1	21	0	-	0	0	.
chr4	123497632	123497633	chr4:123497633:T:C	rs7696421	T	C	T	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr4	123505007	123505008	chr4:123505008:G:T	rs7688738	G	T	T	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr4	123720499	123720500	chr4:123720500:A:C	rs112130403	A	C	A	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr4	123910375	123910376	chr4:123910376:T:C	rs115808822	T	C	T	Hoxd9_MA0913.1	10	0	-	0	0	.
chr4	124530419	124530420	chr4:124530420:C:T	rs78236887	C	T	c	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr4	124565612	124565613	chr4:124565613:C:A	rs11735298	C	A	C	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr4	124810679	124810680	chr4:124810680:T:G	rs1042342323	T	G	T	Hoxd9_MA0913.1	8	1	-	7.973723031895638	5.974059392243097	GCAGTAAAAA
chr4	124998768	124998769	chr4:124998769:T:C	rs13135635	T	C	C	Hoxd9_MA0913.1	11	0	-	0	0	.
chr4	125042611	125042612	chr4:125042612:G:A	rs7693038	G	A	G	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr4	125090890	125090891	chr4:125090891:C:T	rs35600865	C	T	C	Hoxd9_MA0913.1	1	1	+	8.635860738282448	8.287725110553424	GCCATAAAAT
chr4	125164860	125164861	chr4:125164861:G:A	rs4240276	G	A	G	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr4	125389375	125389376	chr4:125389376:G:A	rs4349616	G	A	G	Hoxd9_MA0913.1	0	1	+	9.209394307523764	8.261660584113304	GTAATAAAAT
chr4	125389375	125389376	chr4:125389376:G:T	chr4:125389376:G:T	G	T	G	Hoxd9_MA0913.1	0	1	+	9.209394307523764	6.1722516115708945	GTAATAAAAT
chr4	125538566	125538567	chr4:125538567:T:G	rs74834478	T	G	T	Hoxd9_MA0913.1	13	0	+	0	0	.
chr4	125576760	125576761	chr4:125576761:T:C	rs1429900	T	C	C	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr4	125641159	125641160	chr4:125641160:T:C	rs9884265	T	C	C	Hoxd9_MA0913.1	0	1	-	8.812437826870472	9.760171550280933	ACAATTAAAA
chr4	125821601	125821602	chr4:125821602:T:C	rs12505119	T	C	T	Hoxd9_MA0913.1	23	0	+	0	0	.
chr4	126351484	126351485	chr4:126351485:G:A	rs9884193	G	A	A	Hoxd9_MA0913.1	12	0	+	0	0	.
chr4	126368197	126368198	chr4:126368198:A:G	rs4566666	A	G	G	Hoxd9_MA0913.1	29	0	+	0	0	.
chr4	126526590	126526591	chr4:126526591:A:C	rs7682142	A	C	C	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr4	126794985	126794986	chr4:126794986:A:C	rs1410020275	A	C	A	Hoxd9_MA0913.1	24	0	+	0	0	.
chr4	127449074	127449075	chr4:127449075:C:T	rs55702172	C	T	C	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr4	128060035	128060036	chr4:128060036:T:G	rs72618835	T	G	G	Hoxd9_MA0913.1	9	1	-	9.760171550280933	8.678133135028622	GCAATTAAAA
chr4	128326384	128326385	chr4:128326385:A:G	rs991785	A	G	G	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr4	128545212	128545213	chr4:128545213:A:G	rs6849507	A	G	-	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr4	128753868	128753869	chr4:128753869:G:T	rs6820206	G	T	T	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr4	128884560	128884561	chr4:128884561:G:A	rs167618	G	A	G	Hoxd9_MA0913.1	19	0	+	0	0	.
chr4	128958555	128958556	chr4:128958556:G:A	rs12171333	G	A	G	Hoxd9_MA0913.1	29	0	-	0	0	.
chr4	128958588	128958589	chr4:128958589:G:A	rs921377	G	A	G	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr4	129034914	129034915	chr4:129034915:C:T	rs77218617	C	T	c	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr4	129335646	129335647	chr4:129335647:C:T	rs72688751	C	T	C	Hoxd9_MA0913.1	10	0	-	0	0	.
chr4	129430302	129430303	chr4:129430303:T:A	chr4:129430303:T:A	T	A	T	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr4	129500013	129500014	chr4:129500014:A:G	rs600121	A	G	G	Hoxd9_MA0913.1	12	0	-	0	0	.
chr4	130091058	130091059	chr4:130091059:G:T	rs13116660	G	T	G	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr4	130575530	130575531	chr4:130575531:G:A	rs4296689	G	A	A	Hoxd9_MA0913.1	20	0	-	0	0	.
chr4	130721641	130721642	chr4:130721642:T:A	rs373462	T	A	.	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr4	131774646	131774647	chr4:131774647:T:A	rs1054954	T	A	T	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr4	131880528	131880529	chr4:131880529:C:T	rs115593006	C	T	C	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr4	131990105	131990106	chr4:131990106:T:A	rs2863923	T	A	T	Hoxd9_MA0913.1	14	0	+	0	0	.
chr4	132811365	132811366	chr4:132811366:C:T	rs114551926	C	T	C	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr4	133130647	133130648	chr4:133130648:C:T	rs9998937	C	T	C	Hoxd9_MA0913.1	29	0	+	0	0	.
chr4	133556725	133556726	chr4:133556726:G:T	rs1389332	G	T	T	Hoxd9_MA0913.1	13	0	-	0	0	.
chr4	134011763	134011764	chr4:134011764:G:A	rs11946632	G	A	G	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr4	134544647	134544648	chr4:134544648:C:T	rs74438518	C	T	C	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr4	135173519	135173520	chr4:135173520:T:G	rs10009456	T	G	G	Hoxd9_MA0913.1	26	0	+	0	0	.
chr4	135731440	135731441	chr4:135731441:C:T	rs57822258	C	T	C	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr4	135807382	135807383	chr4:135807383:A:G	rs4317251	A	G	A	Hoxd9_MA0913.1	14	0	+	0	0	.
chr4	135917382	135917383	chr4:135917383:A:G	rs34212741	A	G	A	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr4	136227075	136227076	chr4:136227076:C:T	rs35981854	C	T	C	Hoxd9_MA0913.1	19	0	+	0	0	.
chr4	137294346	137294347	chr4:137294347:T:C	rs13144809	T	C	T	Hoxd9_MA0913.1	18	0	+	0	0	.
chr4	137532903	137532904	chr4:137532904:C:A	rs1008567891	C	A	C	Hoxd9_MA0913.1	0	1	-	8.187202972822991	5.150060276870121	GCAATTAAGA
chr4	138406055	138406056	chr4:138406056:C:T	rs4863798	C	T	T	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr4	139254161	139254162	chr4:139254162:T:G	rs6836792	T	G	t	Hoxd9_MA0913.1	8	1	-	8.719303557138431	6.719639917485891	GCAATAAAAC
chr4	139485482	139485483	chr4:139485483:A:C	rs3967770	A	C	A	Hoxd9_MA0913.1	9	1	+	9.412035922551908	8.329997507299597	GTAATTAAAA
chr4	139528922	139528923	chr4:139528923:G:A	rs72726570	G	A	G	Hoxd9_MA0913.1	25	0	+	0	0	.
chr4	139756578	139756579	chr4:139756579:G:T	rs17050895	G	T	G	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr4	139808527	139808528	chr4:139808528:A:G	rs773417027	A	G	A	Hoxd9_MA0913.1	17	0	-	0	0	.
chr4	139906957	139906958	chr4:139906958:G:A	rs13102187	G	A	g	Hoxd9_MA0913.1	1	1	-	7.973723031895638	7.625587404166614	GCAGTAAAAA
chr4	139924201	139924202	chr4:139924202:T:C	rs13132016	T	C	C	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr4	140110617	140110618	chr4:140110618:C:T	rs185048788	C	T	C	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr4	140134815	140134816	chr4:140134816:G:A	rs13149768	G	A	G	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr4	140326478	140326479	chr4:140326479:A:T	rs183385197	A	T	A	Hoxd9_MA0913.1	6	1	+	8.32301137036169	5.899691422827706	GCAATAAATA
chr4	140363790	140363791	chr4:140363791:T:C	rs10020870	T	C	t	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr4	140863441	140863442	chr4:140863442:G:A	rs7655676	G	A	G	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr4	140871149	140871150	chr4:140871150:A:G	rs28484958	A	G	A	Hoxd9_MA0913.1	12	0	-	0	0	.
chr4	141459254	141459255	chr4:141459255:C:G	rs142196155	C	G	C	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr4	141912774	141912775	chr4:141912775:G:C	rs6846801	G	C	G	Hoxd9_MA0913.1	29	0	+	0	0	.
chr4	142407183	142407184	chr4:142407184:T:C	rs74908743	T	C	T	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr4	142451650	142451651	chr4:142451651:T:C	rs180702972	T	C	T	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr4	142845010	142845011	chr4:142845011:A:G	rs60263370	A	G	A	Hoxd9_MA0913.1	13	0	+	0	0	.
chr4	143285794	143285795	chr4:143285795:T:C	rs12643013	T	C	T	Hoxd9_MA0913.1	3	1	-	7.943390935685037	6.115771995189933	GCAATTAAGT
chr4	143352204	143352205	chr4:143352205:C:T	rs17017629	C	T	C	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr4	143522196	143522197	chr4:143522197:C:T	rs7685063	C	T	T	Hoxd9_MA0913.1	19	0	-	0	0	.
chr4	143781680	143781681	chr4:143781681:C:T	rs7687151	C	T	.	Hoxd9_MA0913.1	21	0	+	0	0	.
chr4	144382481	144382482	chr4:144382482:A:C	rs13121032	A	C	A	Hoxd9_MA0913.1	29	0	-	0	0	.
chr4	144502815	144502816	chr4:144502816:A:C	rs973796	A	C	A	Hoxd9_MA0913.1	6	1	+	9.55752993525279	5.0829530725845835	GCAATAAAAT
chr4	145537917	145537918	chr4:145537918:A:C	rs150504007	A	C	A	Hoxd9_MA0913.1	12	0	+	0	0	.
chr4	145565487	145565488	chr4:145565488:G:A	rs13117885	G	A	G	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr4	146521153	146521154	chr4:146521154:G:C	rs75040117	G	C	g	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr4	146521178	146521179	chr4:146521179:G:A	rs1004802666	G	A	g	Hoxd9_MA0913.1	24	0	+	0	0	.
chr4	146843234	146843235	chr4:146843235:T:C	rs10029061	T	C	C	Hoxd9_MA0913.1	1	1	+	9.453206344661718	9.801341972390743	GTAATAAAAA
chr4	147060914	147060915	chr4:147060915:A:G	rs115058519	A	G	A	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr4	147060922	147060923	chr4:147060923:G:C	rs151042415	G	C	G	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr4	147094297	147094298	chr4:147094298:G:A	rs60132894	G	A	G	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr4	147428656	147428657	chr4:147428657:T:C	rs1594087	T	C	c	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr4	147518099	147518100	chr4:147518100:C:T	rs879405797	C	T	C	Hoxd9_MA0913.1	14	0	-	0	0	.
chr4	147518100	147518101	chr4:147518101:A:G	rs570557466	A	G	A	Hoxd9_MA0913.1	13	0	-	0	0	.
chr4	147527412	147527413	chr4:147527413:G:A	rs10028507	G	A	A	Hoxd9_MA0913.1	27	0	+	0	0	.
chr4	147731704	147731705	chr4:147731705:C:T	rs537918611	C	T	C	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr4	147866243	147866244	chr4:147866244:G:T	rs976025876	G	T	G	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr4	147958937	147958938	chr4:147958938:A:G	rs868208134	A	G	A	Hoxd9_MA0913.1	20	0	+	0	0	.
chr4	148107570	148107571	chr4:148107571:C:T	rs35480965	C	T	C	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr4	148261989	148261990	chr4:148261990:A:G	rs72655242	A	G	A	Hoxd9_MA0913.1	13	0	-	0	0	.
chr4	148396324	148396325	chr4:148396325:T:A	rs9993239	T	A	T	Hoxd9_MA0913.1	20	0	+	0	0	.
chr4	148730500	148730501	chr4:148730501:C:G	rs6535634	C	G	G	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr4	148828027	148828028	chr4:148828028:G:A	rs28478244	G	A	G	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr4	148954266	148954267	chr4:148954267:G:T	rs1042968991	G	T	G	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr4	149278056	149278057	chr4:149278057:C:T	rs12506475	C	T	C	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr4	149322077	149322078	chr4:149322078:A:T	rs72724014	A	T	A	Hoxd9_MA0913.1	3	1	+	8.281840948251881	4.667501079122898	GCAATTAATA
chr4	149555975	149555976	chr4:149555976:C:A	rs6535690	C	A	C	Hoxd9_MA0913.1	28	0	-	0	0	.
chr4	150069542	150069543	chr4:150069543:G:A	rs6825176	G	A	G	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr4	150533901	150533902	chr4:150533902:G:A	rs28550140	G	A	G	Hoxd9_MA0913.1	2	1	-	7.7976343601680895	2.2689595252876487	GCCATAAAAC
chr4	150533928	150533929	chr4:150533929:C:T	rs1995540	C	T	T	Hoxd9_MA0913.1	17	0	+	0	0	.
chr4	150560704	150560705	chr4:150560705:G:A	rs1976494	G	A	G	Hoxd9_MA0913.1	21	0	+	0	0	.
chr4	151436291	151436292	chr4:151436292:T:C	rs2709813	T	C	C	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr4	151607324	151607325	chr4:151607325:G:A	rs4696273	G	A	G	Hoxd9_MA0913.1	28	0	+	0	0	.
chr4	151607325	151607326	chr4:151607326:C:A	rs4696274	C	A	C	Hoxd9_MA0913.1	29	0	+	0	0	.
chr4	151690723	151690724	chr4:151690724:A:G	chr4:151690724:A:G	A	G	A	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr4	151798095	151798096	chr4:151798096:A:G	rs72964945	A	G	A	Hoxd9_MA0913.1	25	0	-	0	0	.
chr4	151878691	151878692	chr4:151878692:G:A	rs72732137	G	A	G	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr4	152165441	152165442	chr4:152165442:G:A	rs564803069	G	A	G	Hoxd9_MA0913.1	0	1	+	8.2283733949328	7.280639671522341	GCAATAAAGA
chr4	152189549	152189550	chr4:152189550:C:T	rs13127863	C	T	C	Hoxd9_MA0913.1	25	0	-	0	0	.
chr4	152189556	152189557	chr4:152189557:C:T	rs113126852	C	T	C	Hoxd9_MA0913.1	18	0	-	0	0	.
chr4	152599243	152599244	chr4:152599244:T:C	rs80221030	T	C	T	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr4	152661445	152661446	chr4:152661446:C:T	rs6841238	C	T	C	Hoxd9_MA0913.1	20	0	-	0	0	.
chr4	152735485	152735486	chr4:152735486:T:A	rs114613434	T	A	T	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr4	152739057	152739058	chr4:152739058:G:A	rs10009931	G	A	A	Hoxd9_MA0913.1	12	0	+	0	0	.
chr4	153095323	153095324	chr4:153095324:A:C	rs17029672	A	C	A	Hoxd9_MA0913.1	5	1	+	8.853608248980283	5.418806477610913	ACAATAAAAA
chr4	153109017	153109018	chr4:153109018:A:G	rs7659935	A	G	G	Hoxd9_MA0913.1	20	0	+	0	0	.
chr4	153119062	153119063	chr4:153119063:C:T	rs6849116	C	T	T	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr4	153242241	153242242	chr4:153242242:T:C	rs10009522	T	C	c	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr4	153261137	153261138	chr4:153261138:T:C	rs1025791	T	C	T	Hoxd9_MA0913.1	16	0	+	0	0	.
chr4	153421143	153421144	chr4:153421144:C:T	rs10022945	C	T	T	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr4	153451348	153451349	chr4:153451349:G:A	rs72969166	G	A	G	Hoxd9_MA0913.1	28	0	-	0	0	.
chr4	153498069	153498070	chr4:153498070:G:A	rs79060768	G	A	G	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr4	153524445	153524446	chr4:153524446:T:C	rs12500924	T	C	T	Hoxd9_MA0913.1	13	0	-	0	0	.
chr4	153524454	153524455	chr4:153524455:A:G	rs79860579	A	G	A	Hoxd9_MA0913.1	4	1	-	8.490366725581566	5.198232473806588	GTCATTAAAA
chr4	153564603	153564604	chr4:153564604:G:C	rs74887020	G	C	g	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr4	153785114	153785115	chr4:153785115:A:G	rs6853529	A	G	A	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr4	153962340	153962341	chr4:153962341:G:A	rs6818192	G	A	G	Hoxd9_MA0913.1	0	1	-	8.323343304007485	6.764199276437873	CCAATAAAAA
chr4	154009812	154009813	chr4:154009813:G:A	rs6814543	G	A	A	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr4	154471322	154471323	chr4:154471323:A:T	rs4696580	A	T	A	Hoxd9_MA0913.1	4	1	-	8.32301137036169	5.6357599461755346	GCAATAAATA
chr4	154499656	154499657	chr4:154499657:G:A	rs6819398	G	A	A	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr4	155583324	155583325	chr4:155583325:T:C	rs78250994	T	C	T	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr4	155591175	155591176	chr4:155591176:A:G	rs76396658	A	G	A	Hoxd9_MA0913.1	27	0	+	0	0	.
chr4	155648048	155648049	chr4:155648049:G:A	rs2062175	G	A	G	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr4	155653578	155653579	chr4:155653579:C:T	rs56043124	C	T	C	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr4	155675237	155675238	chr4:155675238:T:C	rs2625277	T	C	T	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr4	155687775	155687776	chr4:155687776:G:A	rs116761688	G	A	G	Hoxd9_MA0913.1	20	0	-	0	0	.
chr4	155776428	155776429	chr4:155776429:A:G	rs4622952	A	G	G	Hoxd9_MA0913.1	28	0	+	0	0	.
chr4	155961208	155961209	chr4:155961209:T:G	rs6837784	T	G	T	Hoxd9_MA0913.1	5	1	-	9.209394307523764	5.774592536154395	GTAATAAAAT
chr4	155966576	155966577	chr4:155966577:A:G	rs72962493	A	G	A	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr4	155982691	155982692	chr4:155982692:T:A	rs12507353	T	A	T	Hoxd9_MA0913.1	14	0	-	0	0	.
chr4	156119220	156119221	chr4:156119221:C:T	rs28721495	C	T	C	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr4	156298523	156298524	chr4:156298524:C:T	rs770100825	C	T	C	Hoxd9_MA0913.1	21	0	+	0	0	.
chr4	156330017	156330018	chr4:156330018:T:C	rs13144229	T	C	T	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr4	156568753	156568754	chr4:156568754:G:A	rs1554472	G	A	G	Hoxd9_MA0913.1	9	1	-	8.329997507299597	9.168223885413955	GTAATTAAAC
chr4	156829553	156829554	chr4:156829554:G:T	rs28634311	G	T	T	Hoxd9_MA0913.1	1	1	-	8.32301137036169	5.9031929943364325	GCAATAAATA
chr4	156865690	156865691	chr4:156865691:T:G	rs7687106	T	G	T	Hoxd9_MA0913.1	13	0	+	0	0	.
chr4	156884398	156884399	chr4:156884399:G:A	rs75636043	G	A	G	Hoxd9_MA0913.1	14	0	+	0	0	.
chr4	157713530	157713531	chr4:157713531:G:A	rs10030833	G	A	G	Hoxd9_MA0913.1	20	0	+	0	0	.
chr4	158298085	158298086	chr4:158298086:T:C	rs76367679	T	C	T	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr4	158302341	158302342	chr4:158302342:C:A	rs534249831	C	A	C	Hoxd9_MA0913.1	0	1	-	8.635860738282448	5.598718042329578	GCCATAAAAT
chr4	158828343	158828344	chr4:158828344:C:T	rs187074568	C	T	C	Hoxd9_MA0913.1	28	0	+	0	0	.
chr4	158997081	158997082	chr4:158997082:C:T	rs499957	C	T	A	Hoxd9_MA0913.1	21	0	-	0	0	.
chr4	159283938	159283939	chr4:159283939:C:A	rs146642300	C	A	C	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr4	159996303	159996304	chr4:159996304:G:T	rs7683562	G	T	-	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr4	160051934	160051935	chr4:160051935:A:G	rs2349523	A	G	G	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr4	160238953	160238954	chr4:160238954:C:T	rs61190455	C	T	C	Hoxd9_MA0913.1	29	0	-	0	0	.
chr4	160239000	160239001	chr4:160239001:T:C	rs35514758	T	C	C	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr4	160251219	160251220	chr4:160251220:T:C	rs186098	T	C	T	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr4	160258541	160258542	chr4:160258542:T:C	rs295240	T	C	T	Hoxd9_MA0913.1	21	0	+	0	0	.
chr4	160816539	160816540	chr4:160816540:C:T	rs140494033	C	T	C	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr4	160875210	160875211	chr4:160875211:A:G	rs74750699	A	G	A	Hoxd9_MA0913.1	18	0	-	0	0	.
chr4	160934931	160934932	chr4:160934932:G:A	rs9993721	G	A	G	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr4	161566164	161566165	chr4:161566165:C:T	rs7688213	C	T	C	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr4	161656997	161656998	chr4:161656998:C:A	rs11724691	C	A	C	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr4	161919481	161919482	chr4:161919482:G:A	rs1470139	G	A	G	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr4	162058756	162058757	chr4:162058757:T:A	rs77487691	T	A	T	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr4	162154989	162154990	chr4:162154990:C:T	rs12512596	C	T	t	Hoxd9_MA0913.1	11	0	+	0	0	.
chr4	162269217	162269218	chr4:162269218:C:T	rs10015093	C	T	C	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr4	162497779	162497780	chr4:162497780:A:C	rs72986558	A	C	A	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr4	163033010	163033011	chr4:163033011:T:C	rs141247317	T	C	T	Hoxd9_MA0913.1	21	0	-	0	0	.
chr4	163284700	163284701	chr4:163284701:A:G	rs4438719	A	G	A	Hoxd9_MA0913.1	13	0	-	0	0	.
chr4	163367808	163367809	chr4:163367809:T:C	rs35943558	T	C	T	Hoxd9_MA0913.1	24	0	-	0	0	.
chr4	163665254	163665255	chr4:163665255:A:T	rs9637645	A	T	A	Hoxd9_MA0913.1	27	0	-	0	0	.
chr4	164304149	164304150	chr4:164304150:T:C	rs4541458	T	C	T	Hoxd9_MA0913.1	24	0	+	0	0	.
chr4	164360437	164360438	chr4:164360438:T:C	rs4133206	T	C	.	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr4	165089662	165089663	chr4:165089663:G:A	rs12498760	G	A	G	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr4	165343905	165343906	chr4:165343906:C:G	rs72701632	C	G	C	Hoxd9_MA0913.1	25	0	+	0	0	.
chr4	165663790	165663791	chr4:165663791:C:T	rs2714808	C	T	C	Hoxd9_MA0913.1	1	1	+	8.812437826870472	8.464302199141448	ACAATTAAAA
chr4	165744919	165744920	chr4:165744920:C:T	rs881822	C	T	C	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr4	166065041	166065042	chr4:166065042:G:A	rs6536942	G	A	A	Hoxd9_MA0913.1	17	0	+	0	0	.
chr4	166961421	166961422	chr4:166961422:T:C	rs140441427	T	C	T	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr4	167456174	167456175	chr4:167456175:T:C	rs12649155	T	C	t	Hoxd9_MA0913.1	5	1	-	8.719303557138431	2.4976404042425617	GCAATAAAAC
chr4	167933910	167933911	chr4:167933911:T:G	rs35155269	T	G	T	Hoxd9_MA0913.1	2	1	-	7.932552609785828	7.010883412815486	GCAGTTAAAA
chr4	168021790	168021791	chr4:168021791:A:C	rs35270405	A	C	C	Hoxd9_MA0913.1	8	1	+	9.801341972390743	7.801678332738202	GCAATAAAAA
chr4	168317649	168317650	chr4:168317650:T:A	rs111864446	T	A	T	Hoxd9_MA0913.1	12	0	-	0	0	.
chr4	168524628	168524629	chr4:168524629:A:G	rs7700048	A	G	G	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr4	168694376	168694377	chr4:168694377:G:C	rs28641686	G	C	C	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr4	168739855	168739856	chr4:168739856:G:A	rs7698312	G	A	A	Hoxd9_MA0913.1	13	0	-	0	0	.
chr4	168756461	168756462	chr4:168756462:C:T	rs12646759	C	T	T	Hoxd9_MA0913.1	1	1	+	8.334848631621252	7.986713003892226	GCAATAAAAG
chr4	168850889	168850890	chr4:168850890:T:C	rs28679640	T	C	T	Hoxd9_MA0913.1	23	0	-	0	0	.
chr4	168864850	168864851	chr4:168864851:T:C	rs79402526	T	C	T	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr4	169074130	169074131	chr4:169074131:A:T	rs11132795	A	T	A	Hoxd9_MA0913.1	17	0	-	0	0	.
chr4	169160818	169160819	chr4:169160819:G:A	rs13142867	G	A	G	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr4	169164545	169164546	chr4:169164546:G:A	rs67620067	G	A	G	Hoxd9_MA0913.1	27	0	-	0	0	.
chr4	169610874	169610875	chr4:169610875:A:G	rs78653929	A	G	A	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr4	170004660	170004661	chr4:170004661:A:G	rs777531664	A	G	A	Hoxd9_MA0913.1	21	0	+	0	0	.
chr4	170047876	170047877	chr4:170047877:C:T	rs9997355	C	T	-	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr4	170047886	170047887	chr4:170047887:A:T	rs1904822	A	T	-	Hoxd9_MA0913.1	6	1	+	8.812437826870472	6.389117879336487	ACAATTAAAA
chr4	170047899	170047900	chr4:170047900:T:A	rs550454445	T	A	T	Hoxd9_MA0913.1	19	0	+	0	0	.
chr4	171234334	171234335	chr4:171234335:A:G	rs4692874	A	G	G	Hoxd9_MA0913.1	21	0	+	0	0	.
chr4	171461781	171461782	chr4:171461782:T:A	rs1497647	T	A	A	Hoxd9_MA0913.1	17	0	-	0	0	.
chr4	171461818	171461819	chr4:171461819:C:T	rs1497646	C	T	T	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr4	171602946	171602947	chr4:171602947:G:A	rs74761043	G	A	G	Hoxd9_MA0913.1	29	0	-	0	0	.
chr4	172033124	172033125	chr4:172033125:C:G	rs79858841	C	G	C	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr4	172033909	172033910	chr4:172033910:A:T	rs12647912	A	T	A	Hoxd9_MA0913.1	23	0	-	0	0	.
chr4	172076227	172076228	chr4:172076228:A:C	rs28440067	A	C	A	Hoxd9_MA0913.1	21	0	-	0	0	.
chr4	172157303	172157304	chr4:172157304:G:A	rs1873568	G	A	A	Hoxd9_MA0913.1	24	0	-	0	0	.
chr4	172410759	172410760	chr4:172410760:A:G	chr4:172410760:A:G	A	G	A	Hoxd9_MA0913.1	27	0	-	0	0	.
chr4	172979158	172979159	chr4:172979159:G:A	rs9997573	G	A	G	Hoxd9_MA0913.1	20	0	-	0	0	.
chr4	173038161	173038162	chr4:173038162:A:G	rs17255483	A	G	A	Hoxd9_MA0913.1	4	1	-	8.531537147691377	5.239402895916397	GTCATAAAAA
chr4	173111571	173111572	chr4:173111572:T:A	rs61043356	T	A	T	Hoxd9_MA0913.1	10	0	+	0	0	.
chr4	173276730	173276731	chr4:173276731:C:T	rs78093013	C	T	C	Hoxd9_MA0913.1	10	0	+	0	0	.
chr4	173476623	173476624	chr4:173476624:C:A	rs4146858	C	A	C	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr4	173506621	173506622	chr4:173506622:C:G	rs13130424	C	G	C	Hoxd9_MA0913.1	16	0	-	0	0	.
chr4	174155324	174155325	chr4:174155325:T:C	rs728160	T	C	T	Hoxd9_MA0913.1	19	0	+	0	0	.
chr4	174389145	174389146	chr4:174389146:G:C	rs4131103	G	C	C	Hoxd9_MA0913.1	1	1	-	8.32301137036169	5.230446358076978	GCAATAAATA
chr4	174402831	174402832	chr4:174402832:G:C	rs11725800	G	C	G	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr4	174451979	174451980	chr4:174451980:G:T	rs1011820675	G	T	G	Hoxd9_MA0913.1	1	1	-	8.812437826870472	6.392619450845213	ACAATTAAAA
chr4	174549517	174549518	chr4:174549518:T:G	rs1365625	T	G	G	Hoxd9_MA0913.1	22	0	+	0	0	.
chr4	174682141	174682142	chr4:174682142:G:A	rs72706156	G	A	G	Hoxd9_MA0913.1	1	1	-	7.75646393805828	7.408328310329255	GCCATTAAAC
chr4	176052844	176052845	chr4:176052845:C:T	rs77552758	C	T	C	Hoxd9_MA0913.1	1	1	+	7.7976343601680895	7.449498732439066	GCCATAAAAC
chr4	176220967	176220968	chr4:176220968:C:T	rs55654083	C	T	c	Hoxd9_MA0913.1	18	0	-	0	0	.
chr4	176315651	176315652	chr4:176315652:A:G	rs9995744	A	G	G	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr4	176339909	176339910	chr4:176339910:T:G	rs6855882	T	G	G	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr4	176401288	176401289	chr4:176401289:A:G	rs142867768	A	G	A	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr4	176508122	176508123	chr4:176508123:A:G	rs309702	A	G	G	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr4	176525668	176525669	chr4:176525669:A:G	rs77725524	A	G	A	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr4	176549907	176549908	chr4:176549908:G:A	rs17688188	G	A	G	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr4	176594229	176594230	chr4:176594230:C:T	rs13152666	C	T	C	Hoxd9_MA0913.1	15	0	-	0	0	.
chr4	176906962	176906963	chr4:176906963:T:C	rs2574911	T	C	C	Hoxd9_MA0913.1	13	0	+	0	0	.
chr4	176988621	176988622	chr4:176988622:A:T	rs10004906	A	T	A	Hoxd9_MA0913.1	17	0	-	0	0	.
chr4	176988624	176988625	chr4:176988625:T:A	rs28508322	T	A	T	Hoxd9_MA0913.1	14	0	-	0	0	.
chr4	177077523	177077524	chr4:177077524:T:G	rs1347899	T	G	T	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr4	177077539	177077540	chr4:177077540:T:C	rs34047791	T	C	T	Hoxd9_MA0913.1	15	0	+	0	0	.
chr4	177189706	177189707	chr4:177189707:T:C	rs12641024	T	C	T	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr4	177298184	177298185	chr4:177298185:T:G	rs11935183	T	G	T	Hoxd9_MA0913.1	4	1	+	8.329997507299597	5.037863255524616	GTAATTAAAC
chr4	177586624	177586625	chr4:177586625:G:C	rs1920966	G	C	G	Hoxd9_MA0913.1	29	0	+	0	0	.
chr4	177744622	177744623	chr4:177744623:G:C	rs1454201	G	C	A	Hoxd9_MA0913.1	26	0	-	0	0	.
chr4	178027253	178027254	chr4:178027254:C:G	rs55778738	C	G	C	Hoxd9_MA0913.1	1	1	+	8.812437826870472	5.719872814585759	ACAATTAAAA
chr4	178040123	178040124	chr4:178040124:G:A	rs1676175	G	A	A	Hoxd9_MA0913.1	20	0	+	0	0	.
chr4	179416034	179416035	chr4:179416035:A:C	rs10031494	A	C	A	Hoxd9_MA0913.1	13	0	-	0	0	.
chr4	179803955	179803956	chr4:179803956:A:G	rs565607863	A	G	A	Hoxd9_MA0913.1	9	1	+	8.323343304007485	6.856849963237993	CCAATAAAAA
chr4	180280710	180280711	chr4:180280711:C:T	rs62336130	C	T	C	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr4	180538453	180538454	chr4:180538454:A:G	rs11731907	A	G	G	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr4	180717770	180717771	chr4:180717771:T:C	rs2309343	T	C	T	Hoxd9_MA0913.1	11	0	+	0	0	.
chr4	182084592	182084593	chr4:182084593:C:T	rs3849614	C	T	T	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr4	182145617	182145618	chr4:182145618:A:G	rs113729361	A	G	A	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr4	182158280	182158281	chr4:182158281:T:G	rs2122439	T	G	G	Hoxd9_MA0913.1	1	1	+	9.453206344661718	6.7087769601060305	GTAATAAAAA
chr4	182204476	182204477	chr4:182204477:C:T	rs1450144	C	T	T	Hoxd9_MA0913.1	10	0	+	0	0	.
chr4	182227961	182227962	chr4:182227962:G:C	rs79677410	G	C	C	Hoxd9_MA0913.1	0	1	+	9.55752993525279	8.079531266869532	GCAATAAAAT
chr4	182245826	182245827	chr4:182245827:G:T	rs7656126	G	T	T	Hoxd9_MA0913.1	0	1	+	8.719303557138431	5.682160861185562	GCAATAAAAC
chr4	182306967	182306968	chr4:182306968:A:C	rs1216375951	A	C	A	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr4	182451806	182451807	chr4:182451807:G:C	rs17255303	G	C	G	Hoxd9_MA0913.1	0	1	+	8.187202972822991	6.709204304439732	GCAATTAAGA
chr4	182584368	182584369	chr4:182584369:C:G	rs13107775	C	G	G	Hoxd9_MA0913.1	23	0	+	0	0	.
chr4	182705059	182705060	chr4:182705060:A:G	rs755832379	A	G	A	Hoxd9_MA0913.1	3	1	+	8.371167929409406	6.543548988914303	GTAATAAAAC
chr4	182975630	182975631	chr4:182975631:C:A	rs2714533	C	A	C	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr4	182975639	182975640	chr4:182975640:C:T	rs80281593	C	T	C	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr4	183155051	183155052	chr4:183155052:G:A	rs75818457	G	A	G	Hoxd9_MA0913.1	18	0	+	0	0	.
chr4	183411658	183411659	chr4:183411659:T:G	rs367882520	T	G	T	Hoxd9_MA0913.1	9	1	+	9.209394307523764	7.986713003892226	GTAATAAAAT
chr4	183423929	183423930	chr4:183423930:T:G	rs73010614	T	G	T	Hoxd9_MA0913.1	17	0	+	0	0	.
chr4	183751709	183751710	chr4:183751710:C:T	chr4:183751710:C:T	C	T	C	Hoxd9_MA0913.1	1	1	+	8.635860738282448	8.287725110553424	GCCATAAAAT
chr4	184262941	184262942	chr4:184262942:A:G	rs6857764	A	G	G	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr4	184316466	184316467	chr4:184316467:A:T	rs4862360	A	T	t	Hoxd9_MA0913.1	14	0	+	0	0	.
chr4	184316499	184316500	chr4:184316500:T:C	rs9799397	T	C	T	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr4	184451979	184451980	chr4:184451980:T:C	rs3775578	T	C	T	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr4	184706107	184706108	chr4:184706108:T:C	rs28579266	T	C	t	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr4	184732106	184732107	chr4:184732107:A:G	rs548895638	A	G	A	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr4	184851542	184851543	chr4:184851543:A:C	rs1032300	A	C	A	Hoxd9_MA0913.1	29	0	-	0	0	.
chr4	185127311	185127312	chr4:185127312:T:A	rs4862512	T	A	A	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr4	185301409	185301410	chr4:185301410:G:C	rs114402822	G	C	G	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr4	185715776	185715777	chr4:185715777:G:A	rs6826210	G	A	A	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr4	185816861	185816862	chr4:185816862:C:T	rs7673778	C	T	T	Hoxd9_MA0913.1	12	0	+	0	0	.
chr4	185925808	185925809	chr4:185925809:C:T	rs4862595	C	T	T	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr4	185964209	185964210	chr4:185964210:T:C	rs12641067	T	C	T	Hoxd9_MA0913.1	19	0	-	0	0	.
chr4	185964267	185964268	chr4:185964268:T:C	rs12641089	T	C	T	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr4	186193324	186193325	chr4:186193325:T:C	rs10866290	T	C	T	Hoxd9_MA0913.1	21	0	+	0	0	.
chr4	186202021	186202022	chr4:186202022:G:T	rs111412681	G	T	G	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr4	186368263	186368264	chr4:186368264:A:G	rs4862681	A	G	A	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr4	186422529	186422530	chr4:186422530:T:C	rs75293572	T	C	C	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr4	186780537	186780538	chr4:186780538:G:C	rs325032	G	C	C	Hoxd9_MA0913.1	15	0	-	0	0	.
chr4	186912880	186912881	chr4:186912881:C:T	rs403300	C	T	C	Hoxd9_MA0913.1	28	0	-	0	0	.
chr4	186921077	186921078	chr4:186921078:G:A	rs6837275	G	A	T	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr4	187210212	187210213	chr4:187210213:G:T	rs13103017	G	T	G	Hoxd9_MA0913.1	10	0	+	0	0	.
chr4	187374832	187374833	chr4:187374833:C:T	rs4862797	C	T	C	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr4	187419804	187419805	chr4:187419805:A:C	rs13131597	A	C	A	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr4	187715689	187715690	chr4:187715690:C:G	rs56412150	C	G	C	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr4	188011312	188011313	chr4:188011313:T:C	rs6853693	T	C	T	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr4	188015329	188015330	chr4:188015330:A:G	rs10000390	A	G	A	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr4	188217653	188217654	chr4:188217654:T:C	rs4324618	T	C	T	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr4	188826077	188826078	chr4:188826078:A:G	rs28446637	A	G	A	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr4	188958498	188958499	chr4:188958499:T:A	rs182913156	T	A	T	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr4	188989801	188989802	chr4:188989802:G:A	rs11132593	G	A	A	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr4	189030939	189030940	chr4:189030940:G:A	rs148506736	G	A	G	Hoxd9_MA0913.1	22	0	-	0	0	.
chr4	189086119	189086120	chr4:189086120:C:T	rs11737442	C	T	T	Hoxd9_MA0913.1	22	0	-	0	0	.
chr4	189371689	189371690	chr4:189371690:A:G	rs11943937	A	G	G	Hoxd9_MA0913.1	26	0	-	0	0	.
chr4	189379153	189379154	chr4:189379154:C:T	rs7673192	C	T	C	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr4	190119557	190119558	chr4:190119558:G:A	rs797038553	G	A	.	Hoxd9_MA0913.1	22	0	+	0	0	.
chr5	21893	21894	chr5:21894:C:T	rs148677358	C	T	.	Hoxd9_MA0913.1	14	0	+	0	0	.
chr5	188503	188504	chr5:188504:G:C	rs11744446	G	C	G	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr5	356054	356055	chr5:356055:G:C	rs11956085	G	C	G	Hoxd9_MA0913.1	10	0	+	0	0	.
chr5	404597	404598	chr5:404598:C:T	rs11743226	C	T	C	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr5	413953	413954	chr5:413954:G:A	rs11954173	G	A	G	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr5	413985	413986	chr5:413986:C:T	rs11746862	C	T	C	Hoxd9_MA0913.1	22	0	+	0	0	.
chr5	413987	413988	chr5:413988:G:C	rs2671896	G	C	G	Hoxd9_MA0913.1	24	0	+	0	0	.
chr5	456341	456342	chr5:456342:A:G	rs2671890	A	G	G	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr5	1481879	1481880	chr5:1481880:C:T	rs55822706	C	T	C	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr5	1494323	1494324	chr5:1494324:C:T	rs40180	C	T	T	Hoxd9_MA0913.1	25	0	+	0	0	.
chr5	1829786	1829787	chr5:1829787:C:T	rs13178976	C	T	c	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr5	1973954	1973955	chr5:1973955:A:G	rs79560876	A	G	A	Hoxd9_MA0913.1	8	1	+	8.678133135028622	7.105164557570679	GCAATTAAAC
chr5	2017580	2017581	chr5:2017581:G:T	rs10475128	G	T	G	Hoxd9_MA0913.1	0	1	+	8.678133135028622	5.640990439075751	GCAATTAAAC
chr5	2184250	2184251	chr5:2184251:C:T	rs13172851	C	T	C	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr5	2279457	2279458	chr5:2279458:G:A	rs6555078	G	A	G	Hoxd9_MA0913.1	19	0	+	0	0	.
chr5	2592888	2592889	chr5:2592889:G:A	rs323681	G	A	A	Hoxd9_MA0913.1	21	0	-	0	0	.
chr5	2617120	2617121	chr5:2617121:C:T	rs11742219	C	T	C	Hoxd9_MA0913.1	18	0	+	0	0	.
chr5	2631262	2631263	chr5:2631263:C:A	chr5:2631263:C:A	C	A	C	Hoxd9_MA0913.1	12	0	+	0	0	.
chr5	2655664	2655665	chr5:2655665:G:A	rs16870234	G	A	G	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr5	2679396	2679397	chr5:2679397:A:G	rs7704762	A	G	G	Hoxd9_MA0913.1	3	1	+	8.594690316172638	6.767071375677533	GCCATTAAAT
chr5	2701011	2701012	chr5:2701012:C:T	rs549773735	C	T	C	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr5	3091331	3091332	chr5:3091332:T:C	rs62333208	T	C	T	Hoxd9_MA0913.1	12	0	-	0	0	.
chr5	3091351	3091352	chr5:3091352:C:T	rs17543060	C	T	T	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr5	3104152	3104153	chr5:3104153:C:T	rs172700	C	T	T	Hoxd9_MA0913.1	16	0	+	0	0	.
chr5	3130642	3130643	chr5:3130643:T:G	rs17622567	T	G	T	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr5	3253902	3253903	chr5:3253903:G:A	rs4302592	G	A	A	Hoxd9_MA0913.1	23	0	+	0	0	.
chr5	3271924	3271925	chr5:3271925:G:A	rs17571538	G	A	G	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr5	3429376	3429377	chr5:3429377:G:A	rs32681	G	A	G	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr5	3601809	3601810	chr5:3601810:A:G	rs62333993	A	G	A	Hoxd9_MA0913.1	28	0	-	0	0	.
chr5	3681949	3681950	chr5:3681950:G:T	rs190609158	G	T	G	Hoxd9_MA0913.1	21	0	-	0	0	.
chr5	3734057	3734058	chr5:3734058:T:C	rs955077	T	C	C	Hoxd9_MA0913.1	10	0	-	0	0	.
chr5	4636210	4636211	chr5:4636211:T:G	rs293111	T	G	G	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr5	4977419	4977420	chr5:4977420:G:A	rs39853	G	A	G	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr5	5313702	5313703	chr5:5313703:A:G	rs13168665	A	G	A	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr5	5419673	5419674	chr5:5419674:G:C	rs79382631	G	C	G	Hoxd9_MA0913.1	10	0	+	0	0	.
chr5	5419677	5419678	chr5:5419678:C:T	rs755061	C	T	A	Hoxd9_MA0913.1	14	0	+	0	0	.
chr5	5460933	5460934	chr5:5460934:C:T	rs749167315	C	T	C	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr5	5953660	5953661	chr5:5953661:T:C	rs73736433	T	C	T	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr5	6821239	6821240	chr5:6821240:G:T	rs1456970	G	T	G	Hoxd9_MA0913.1	26	0	+	0	0	.
chr5	6833194	6833195	chr5:6833195:C:G	rs91981	C	G	G	Hoxd9_MA0913.1	22	0	-	0	0	.
chr5	7261439	7261440	chr5:7261440:A:G	rs10045165	A	G	G	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr5	7271703	7271704	chr5:7271704:T:C	rs16878542	T	C	T	Hoxd9_MA0913.1	17	0	+	0	0	.
chr5	7271800	7271801	chr5:7271801:T:C	rs73739938	T	C	T	Hoxd9_MA0913.1	3	1	-	8.246554688443613	6.41893574794851	GTCATTAAAT
chr5	7667733	7667734	chr5:7667734:G:A	rs78040528	G	A	G	Hoxd9_MA0913.1	24	0	+	0	0	.
chr5	7795755	7795756	chr5:7795756:A:G	rs10052958	A	G	A	Hoxd9_MA0913.1	5	1	+	7.984561357794846	1.7628982048989783	GCAATAAAGT
chr5	7887170	7887171	chr5:7887171:A:C	rs13189728	A	C	A	Hoxd9_MA0913.1	16	0	-	0	0	.
chr5	7928044	7928045	chr5:7928045:G:A	rs16879452	G	A	A	Hoxd9_MA0913.1	23	0	+	0	0	.
chr5	8048572	8048573	chr5:8048573:A:T	rs905514	A	T	A	Hoxd9_MA0913.1	25	0	-	0	0	.
chr5	8831965	8831966	chr5:8831966:A:G	rs1857772	A	G	A	Hoxd9_MA0913.1	26	0	+	0	0	.
chr5	9112481	9112482	chr5:9112482:G:A	rs73045620	G	A	G	Hoxd9_MA0913.1	27	0	-	0	0	.
chr5	9194992	9194993	chr5:9194993:C:T	rs40689	C	T	T	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr5	9195013	9195014	chr5:9195014:A:T	rs141658654	A	T	A	Hoxd9_MA0913.1	19	0	+	0	0	.
chr5	9257784	9257785	chr5:9257785:C:G	rs40710	C	G	c	Hoxd9_MA0913.1	0	1	-	8.371167929409406	6.893169261026149	GTAATAAAAC
chr5	9348308	9348309	chr5:9348309:C:A	rs17196593	C	A	C	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr5	9415604	9415605	chr5:9415605:G:A	rs10475467	G	A	G	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr5	9538183	9538184	chr5:9538184:T:C	rs17328408	T	C	T	Hoxd9_MA0913.1	23	0	-	0	0	.
chr5	9553963	9553964	chr5:9553964:T:C	rs6555607	T	C	T	Hoxd9_MA0913.1	14	0	-	0	0	.
chr5	9839362	9839363	chr5:9839363:C:A	rs535083496	C	A	C	Hoxd9_MA0913.1	15	0	+	0	0	.
chr5	9869579	9869580	chr5:9869580:A:G	rs6898293	A	G	A	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr5	10019752	10019753	chr5:10019753:T:C	rs906073	T	C	T	Hoxd9_MA0913.1	13	0	-	0	0	.
chr5	10099814	10099815	chr5:10099815:T:C	rs906067	T	C	C	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr5	10220272	10220273	chr5:10220273:T:C	rs66845069	T	C	T	Hoxd9_MA0913.1	26	0	-	0	0	.
chr5	10283209	10283210	chr5:10283210:T:G	rs6892453	T	G	G	Hoxd9_MA0913.1	20	0	+	0	0	.
chr5	10317945	10317946	chr5:10317946:C:T	rs76367609	C	T	C	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr5	10317964	10317965	chr5:10317965:G:A	rs474306	G	A	G	Hoxd9_MA0913.1	10	0	+	0	0	.
chr5	10466629	10466630	chr5:10466630:G:A	rs16884756	G	A	G	Hoxd9_MA0913.1	29	0	+	0	0	.
chr5	10703562	10703563	chr5:10703563:A:T	rs1483302	A	T	A	Hoxd9_MA0913.1	0	1	+	8.812437826870472	6.723028854328064	ACAATTAAAA
chr5	10832443	10832444	chr5:10832444:A:C	rs78279107	A	C	A	Hoxd9_MA0913.1	11	0	-	0	0	.
chr5	11090926	11090927	chr5:11090927:T:C	rs6887277	T	C	T	Hoxd9_MA0913.1	21	0	-	0	0	.
chr5	11584229	11584230	chr5:11584230:T:C	rs2190989	T	C	T	Hoxd9_MA0913.1	8	1	+	8.32301137036169	7.801678332738202	GCAATAAATA
chr5	13072863	13072864	chr5:13072864:T:C	rs145443255	T	C	T	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr5	13188081	13188082	chr5:13188082:T:C	rs17164390	T	C	T	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr5	13252479	13252480	chr5:13252480:A:T	rs34482579	A	T	A	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr5	13317941	13317942	chr5:13317942:A:T	rs1470468	A	T	A	Hoxd9_MA0913.1	22	0	+	0	0	.
chr5	13589102	13589103	chr5:13589103:T:C	rs4702961	T	C	T	Hoxd9_MA0913.1	3	1	-	8.246554688443613	6.41893574794851	GTCATTAAAT
chr5	14037673	14037674	chr5:14037674:T:C	rs79027506	T	C	T	Hoxd9_MA0913.1	8	1	-	8.594690316172638	7.021721738714695	GCCATTAAAT
chr5	14098275	14098276	chr5:14098276:C:T	rs75280766	C	T	C	Hoxd9_MA0913.1	28	0	+	0	0	.
chr5	14102650	14102651	chr5:14102651:A:G	rs2119378	A	G	A	Hoxd9_MA0913.1	26	0	+	0	0	.
chr5	14168801	14168802	chr5:14168802:C:T	rs72740400	C	T	C	Hoxd9_MA0913.1	0	1	-	9.412035922551908	8.464302199141448	GTAATTAAAA
chr5	14250305	14250306	chr5:14250306:C:T	rs147376121	C	T	C	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr5	14250330	14250331	chr5:14250331:C:T	rs531678289	C	T	C	Hoxd9_MA0913.1	12	0	+	0	0	.
chr5	14400013	14400014	chr5:14400014:G:A	rs28343	G	A	A	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr5	14490543	14490544	chr5:14490544:T:A	rs116519882	T	A	T	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr5	14490553	14490554	chr5:14490554:T:C	rs142061060	T	C	T	Hoxd9_MA0913.1	4	1	+	8.334848631621252	5.042714379846271	GCAATAAAAG
chr5	14490569	14490570	chr5:14490570:C:G	rs116068526	C	G	C	Hoxd9_MA0913.1	20	0	+	0	0	.
chr5	14534508	14534509	chr5:14534509:T:C	rs41502749	T	C	T	Hoxd9_MA0913.1	5	1	-	8.371167929409406	2.1495047765135378	GTAATAAAAC
chr5	14768656	14768657	chr5:14768657:C:T	rs76549217	C	T	T	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr5	14977255	14977256	chr5:14977256:A:G	rs835083	A	G	A	Hoxd9_MA0913.1	4	1	-	8.2283733949328	4.93623914315782	GCAATAAAGA
chr5	15007692	15007693	chr5:15007693:A:C	rs6867275	A	C	A	Hoxd9_MA0913.1	7	1	+	9.209394307523764	5.915547555805333	GTAATAAAAT
chr5	15232198	15232199	chr5:15232199:C:A	rs10042846	C	A	C	Hoxd9_MA0913.1	10	0	-	0	0	.
chr5	15719659	15719660	chr5:15719660:G:A	rs4235554	G	A	G	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr5	16374988	16374989	chr5:16374989:G:T	rs17649710	G	T	G	Hoxd9_MA0913.1	18	0	-	0	0	.
chr5	16618262	16618263	chr5:16618263:C:A	rs1339955633	C	A	C	Hoxd9_MA0913.1	16	0	+	0	0	.
chr5	16889777	16889778	chr5:16889778:G:C	rs2562341	G	C	G	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr5	16889805	16889806	chr5:16889806:G:A	rs61420593	G	A	G	Hoxd9_MA0913.1	27	0	+	0	0	.
chr5	16932584	16932585	chr5:16932585:C:T	rs62371044	C	T	C	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr5	16932627	16932628	chr5:16932628:A:G	rs116438278	A	G	A	Hoxd9_MA0913.1	26	0	+	0	0	.
chr5	16934458	16934459	chr5:16934459:C:A	rs559978833	C	A	C	Hoxd9_MA0913.1	29	0	+	0	0	.
chr5	17107355	17107356	chr5:17107356:C:A	rs644358	C	A	A	Hoxd9_MA0913.1	27	0	-	0	0	.
chr5	17306055	17306056	chr5:17306056:T:G	rs113846009	T	G	T	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr5	17326118	17326119	chr5:17326119:C:G	rs1374131598	C	G	C	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr5	17326968	17326969	chr5:17326969:C:T	rs28718406	C	T	C	Hoxd9_MA0913.1	29	0	-	0	0	.
chr5	17327014	17327015	chr5:17327015:G:C	rs28453912	G	C	C	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr5	17680646	17680647	chr5:17680647:T:A	rs6450584	T	A	T	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr5	17802291	17802292	chr5:17802292:T:C	rs7444677	T	C	C	Hoxd9_MA0913.1	10	0	+	0	0	.
chr5	17804103	17804104	chr5:17804104:T:A	rs10520849	T	A	A	Hoxd9_MA0913.1	6	1	-	7.984561357794846	5.561241410260862	GCAATAAAGT
chr5	18027700	18027701	chr5:18027701:T:G	rs17711378	T	G	T	Hoxd9_MA0913.1	7	1	-	8.838502353310592	5.54465560159216	GCCATTAAAA
chr5	18099195	18099196	chr5:18099196:A:G	rs76342729	A	G	A	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr5	18099221	18099222	chr5:18099222:C:T	rs34713971	C	T	C	Hoxd9_MA0913.1	25	0	-	0	0	.
chr5	19566900	19566901	chr5:19566901:T:C	rs62349516	T	C	T	Hoxd9_MA0913.1	4	1	+	8.635860738282448	5.343726486507468	GCCATAAAAT
chr5	19851356	19851357	chr5:19851357:A:T	chr5:19851357:A:T	A	T	G	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr5	19859294	19859295	chr5:19859295:C:G	rs62352167	C	G	C	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr5	20711884	20711885	chr5:20711885:A:G	rs59636641	A	G	-	Hoxd9_MA0913.1	5	1	+	8.531537147691377	2.3098739947955087	GTCATAAAAA
chr5	21050492	21050493	chr5:21050493:T:A	rs13436056	T	A	T	Hoxd9_MA0913.1	24	0	+	0	0	.
chr5	21085858	21085859	chr5:21085859:C:T	rs10037748	C	T	T	Hoxd9_MA0913.1	10	0	+	0	0	.
chr5	21879792	21879793	chr5:21879793:C:T	rs16899338	C	T	C	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr5	21999582	21999583	chr5:21999583:G:A	rs10056037	G	A	G	Hoxd9_MA0913.1	26	0	+	0	0	.
chr5	22001362	22001363	chr5:22001363:T:A	rs12514990	T	A	T	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr5	22752012	22752013	chr5:22752013:C:T	rs1561839	C	T	T	Hoxd9_MA0913.1	15	0	-	0	0	.
chr5	22831604	22831605	chr5:22831605:T:A	rs780174	T	A	A	Hoxd9_MA0913.1	11	0	+	0	0	.
chr5	22899994	22899995	chr5:22899995:C:T	rs4701306	C	T	c	Hoxd9_MA0913.1	19	0	+	0	0	.
chr5	23103877	23103878	chr5:23103878:A:T	rs72752747	A	T	A	Hoxd9_MA0913.1	14	0	+	0	0	.
chr5	23389725	23389726	chr5:23389726:G:A	rs4264915	G	A	G	Hoxd9_MA0913.1	24	0	+	0	0	.
chr5	23527809	23527810	chr5:23527810:A:G	rs2099081	A	G	G	Hoxd9_MA0913.1	29	0	+	0	0	.
chr5	24223103	24223104	chr5:24223104:T:C	rs79229694	T	C	T	Hoxd9_MA0913.1	0	1	-	8.853608248980283	9.801341972390743	ACAATAAAAA
chr5	24234335	24234336	chr5:24234336:G:A	rs35005829	G	A	G	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr5	24643876	24643877	chr5:24643877:A:C	rs332008	A	C	C	Hoxd9_MA0913.1	24	0	-	0	0	.
chr5	24954840	24954841	chr5:24954841:T:A	rs1353957	T	A	A	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr5	25262404	25262405	chr5:25262405:C:A	rs4701477	C	A	A	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr5	25897446	25897447	chr5:25897447:T:C	rs6894102	T	C	C	Hoxd9_MA0913.1	22	0	+	0	0	.
chr5	26553092	26553093	chr5:26553093:C:T	rs1428725	C	T	T	Hoxd9_MA0913.1	17	0	-	0	0	.
chr5	26601805	26601806	chr5:26601806:T:C	rs12109634	T	C	T	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr5	26649324	26649325	chr5:26649325:G:A	rs17560127	G	A	g	Hoxd9_MA0913.1	15	0	-	0	0	.
chr5	27947404	27947405	chr5:27947405:T:C	rs16897223	T	C	C	Hoxd9_MA0913.1	9	1	+	8.594690316172638	7.75646393805828	GCCATTAAAT
chr5	28737877	28737878	chr5:28737878:A:C	rs28712182	A	C	C	Hoxd9_MA0913.1	29	0	+	0	0	.
chr5	28821012	28821013	chr5:28821013:T:C	rs1910074	T	C	C	Hoxd9_MA0913.1	2	1	-	9.168223885413955	7.490765443955856	GTAATTAAAT
chr5	29462536	29462537	chr5:29462537:C:T	rs78265136	C	T	T	Hoxd9_MA0913.1	1	1	+	8.635860738282448	8.287725110553424	GCCATAAAAT
chr5	29821860	29821861	chr5:29821861:C:A	rs115487168	C	A	C	Hoxd9_MA0913.1	12	0	-	0	0	.
chr5	29854283	29854284	chr5:29854284:C:T	rs13153010	C	T	C	Hoxd9_MA0913.1	0	1	-	9.209394307523764	8.261660584113304	GTAATAAAAT
chr5	30196708	30196709	chr5:30196709:C:A	rs6872827	C	A	c	Hoxd9_MA0913.1	14	0	+	0	0	.
chr5	30257640	30257641	chr5:30257641:G:A	rs4867261	G	A	G	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr5	30506262	30506263	chr5:30506263:C:G	rs12657298	C	G	C	Hoxd9_MA0913.1	11	0	+	0	0	.
chr5	30607684	30607685	chr5:30607685:T:C	rs1436974	T	C	C	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr5	30840031	30840032	chr5:30840032:G:T	rs1921086	G	T	G	Hoxd9_MA0913.1	29	0	-	0	0	.
chr5	30856878	30856879	chr5:30856879:A:G	rs4867286	A	G	A	Hoxd9_MA0913.1	13	0	+	0	0	.
chr5	30932720	30932721	chr5:30932721:A:G	rs115378262	A	G	A	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr5	31027952	31027953	chr5:31027953:C:A	rs559922255	C	A	C	Hoxd9_MA0913.1	1	1	+	7.7976343601680895	5.377815984142831	GCCATAAAAC
chr5	31131779	31131780	chr5:31131780:C:T	rs13165994	C	T	T	Hoxd9_MA0913.1	21	0	-	0	0	.
chr5	31380205	31380206	chr5:31380206:G:A	rs162863	G	A	G	Hoxd9_MA0913.1	11	0	+	0	0	.
chr5	31520601	31520602	chr5:31520602:A:G	rs7719497	A	G	A	Hoxd9_MA0913.1	3	1	+	9.209394307523764	7.381775367028661	GTAATAAAAT
chr5	31757943	31757944	chr5:31757944:T:C	rs529738	T	C	T	Hoxd9_MA0913.1	23	0	-	0	0	.
chr5	32154226	32154227	chr5:32154227:C:G	rs6859125	C	G	C	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr5	32229570	32229571	chr5:32229571:G:A	rs1873921	G	A	A	Hoxd9_MA0913.1	27	0	-	0	0	.
chr5	32366233	32366234	chr5:32366234:A:C	rs112363536	A	C	A	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr5	32467812	32467813	chr5:32467813:G:A	rs602162	G	A	G	Hoxd9_MA0913.1	28	0	+	0	0	.
chr5	32499982	32499983	chr5:32499983:C:G	rs2594825	C	G	C	Hoxd9_MA0913.1	23	0	-	0	0	.
chr5	32597361	32597362	chr5:32597362:G:A	rs4867459	G	A	G	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr5	32648786	32648787	chr5:32648787:A:G	rs10214339	A	G	A	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr5	32865947	32865948	chr5:32865948:T:C	rs6863996	T	C	C	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr5	33180941	33180942	chr5:33180942:T:C	rs13171690	T	C	T	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr5	33713455	33713456	chr5:33713456:C:T	rs10050510	C	T	C	Hoxd9_MA0913.1	9	1	-	8.334848631621252	9.801341972390743	GCAATAAAAG
chr5	33852581	33852582	chr5:33852582:T:C	chr5:33852582:T:C	T	C	T	Hoxd9_MA0913.1	18	0	-	0	0	.
chr5	34021600	34021601	chr5:34021601:C:T	rs840382	C	T	T	Hoxd9_MA0913.1	24	0	+	0	0	.
chr5	34157046	34157047	chr5:34157047:A:G	rs4143437	A	G	N	Hoxd9_MA0913.1	23	0	-	0	0	.
chr5	34503675	34503676	chr5:34503676:C:A	rs4146607	C	A	C	Hoxd9_MA0913.1	3	1	-	7.932552609785828	6.1458316811519484	GCAGTTAAAA
chr5	34527089	34527090	chr5:34527090:T:G	rs189838969	T	G	T	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr5	34527111	34527112	chr5:34527112:G:A	rs59388963	G	A	G	Hoxd9_MA0913.1	13	0	+	0	0	.
chr5	34652703	34652704	chr5:34652704:G:A	rs462329	G	A	G	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr5	34678334	34678335	chr5:34678335:T:C	rs173908	T	C	C	Hoxd9_MA0913.1	8	1	-	8.812437826870472	7.2394692494125295	ACAATTAAAA
chr5	34682890	34682891	chr5:34682891:G:C	rs16903658	G	C	G	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr5	34687805	34687806	chr5:34687806:G:A	rs2279604	G	A	A	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr5	35198763	35198764	chr5:35198764:T:C	rs991799673	T	C	T	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr5	35228650	35228651	chr5:35228651:G:A	rs6863018	G	A	G	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr5	35237683	35237684	chr5:35237684:A:G	rs6883649	A	G	A	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr5	35608586	35608587	chr5:35608587:T:A	rs7702882	T	A	A	Hoxd9_MA0913.1	14	0	+	0	0	.
chr5	35838432	35838433	chr5:35838433:G:A	rs142641744	G	A	G	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr5	35870485	35870486	chr5:35870486:A:G	rs9292616	A	G	G	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr5	35973772	35973773	chr5:35973773:T:G	rs1374011	T	G	G	Hoxd9_MA0913.1	8	1	-	9.51635951314298	7.516695873490439	GCAATTAAAT
chr5	36152692	36152693	chr5:36152693:T:C	rs114155491	T	C	T	Hoxd9_MA0913.1	17	0	-	0	0	.
chr5	36302088	36302089	chr5:36302089:C:A	chr5:36302089:C:A	C	A	C	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr5	36458173	36458174	chr5:36458174:C:G	rs6883721	C	G	C	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr5	36607762	36607763	chr5:36607763:T:C	rs13154397	T	C	T	Hoxd9_MA0913.1	17	0	-	0	0	.
chr5	36641175	36641176	chr5:36641176:C:T	rs75027360	C	T	C	Hoxd9_MA0913.1	17	0	+	0	0	.
chr5	36657400	36657401	chr5:36657401:C:T	rs55726251	C	T	C	Hoxd9_MA0913.1	28	0	+	0	0	.
chr5	36658067	36658068	chr5:36658068:A:C	rs79688373	A	C	A	Hoxd9_MA0913.1	27	0	+	0	0	.
chr5	36670557	36670558	chr5:36670558:T:C	rs1423680	T	C	T	Hoxd9_MA0913.1	3	1	-	8.594690316172638	6.767071375677533	GCCATTAAAT
chr5	36717691	36717692	chr5:36717692:G:C	rs71617765	G	C	G	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr5	36717723	36717724	chr5:36717724:C:T	rs114041243	C	T	C	Hoxd9_MA0913.1	20	0	+	0	0	.
chr5	36802465	36802466	chr5:36802466:G:T	rs34139494	G	T	T	Hoxd9_MA0913.1	2	1	-	8.635860738282448	9.55752993525279	GCCATAAAAT
chr5	36878605	36878606	chr5:36878606:T:C	rs190742518	T	C	T	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr5	37021830	37021831	chr5:37021831:T:C	rs35701604	T	C	T	Hoxd9_MA0913.1	21	0	+	0	0	.
chr5	37231286	37231287	chr5:37231287:C:T	rs113546700	C	T	C	Hoxd9_MA0913.1	12	0	+	0	0	.
chr5	37413097	37413098	chr5:37413098:G:A	rs2056872	G	A	A	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr5	37413101	37413102	chr5:37413102:G:A	rs554639671	G	A	G	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr5	37413109	37413110	chr5:37413110:A:G	chr5:37413110:A:G	A	G	a	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr5	37454734	37454735	chr5:37454735:C:T	rs73749038	C	T	C	Hoxd9_MA0913.1	20	0	-	0	0	.
chr5	37599483	37599484	chr5:37599484:A:G	rs55960353	A	G	A	Hoxd9_MA0913.1	19	0	+	0	0	.
chr5	37742449	37742450	chr5:37742450:G:A	rs62358883	G	A	G	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr5	37838819	37838820	chr5:37838820:C:T	rs114812377	C	T	C	Hoxd9_MA0913.1	25	0	+	0	0	.
chr5	38435475	38435476	chr5:38435476:A:G	rs112409432	A	G	A	Hoxd9_MA0913.1	25	0	-	0	0	.
chr5	38759427	38759428	chr5:38759428:C:T	rs78380242	C	T	C	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr5	38799514	38799515	chr5:38799515:C:T	rs17353976	C	T	C	Hoxd9_MA0913.1	28	0	-	0	0	.
chr5	38854417	38854418	chr5:38854418:T:C	rs76881637	T	C	T	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr5	39073404	39073405	chr5:39073405:C:T	rs78183424	C	T	C	Hoxd9_MA0913.1	28	0	+	0	0	.
chr5	39158219	39158220	chr5:39158220:G:T	rs10052584	G	T	T	Hoxd9_MA0913.1	1	1	-	8.812437826870472	6.392619450845213	ACAATTAAAA
chr5	39203588	39203589	chr5:39203589:T:C	rs73091051	T	C	T	Hoxd9_MA0913.1	9	1	+	9.209394307523764	8.371167929409406	GTAATAAAAT
chr5	39266546	39266547	chr5:39266547:C:G	rs266913	C	G	G	Hoxd9_MA0913.1	9	1	+	8.719303557138431	8.334848631621252	GCAATAAAAC
chr5	39355545	39355546	chr5:39355546:G:A	rs1421095	G	A	G	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr5	39395848	39395849	chr5:39395849:T:C	rs62358416	T	C	T	Hoxd9_MA0913.1	2	1	-	8.812437826870472	7.1349793854123735	ACAATTAAAA
chr5	39468926	39468927	chr5:39468927:G:C	rs6451425	G	C	G	Hoxd9_MA0913.1	10	0	+	0	0	.
chr5	39473101	39473102	chr5:39473102:T:C	rs13187098	T	C	C	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr5	39570534	39570535	chr5:39570535:T:A	rs78372218	T	A	T	Hoxd9_MA0913.1	11	0	+	0	0	.
chr5	39577856	39577857	chr5:39577857:A:G	rs72741775	A	G	A	Hoxd9_MA0913.1	13	0	+	0	0	.
chr5	39731466	39731467	chr5:39731467:A:G	rs11744255	A	G	A	Hoxd9_MA0913.1	10	0	-	0	0	.
chr5	39843041	39843042	chr5:39843042:C:T	rs576208	C	T	C	Hoxd9_MA0913.1	25	0	+	0	0	.
chr5	39984726	39984727	chr5:39984727:T:A	rs1847923	T	A	T	Hoxd9_MA0913.1	9	1	-	9.453206344661718	9.209394307523764	GTAATAAAAA
chr5	40128385	40128386	chr5:40128386:C:T	rs111690664	C	T	C	Hoxd9_MA0913.1	26	0	-	0	0	.
chr5	40228457	40228458	chr5:40228458:C:T	rs353366	C	T	C	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr5	40347156	40347157	chr5:40347157:A:G	rs16869831	A	G	A	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr5	40353954	40353955	chr5:40353955:C:A	rs73082837	C	A	C	Hoxd9_MA0913.1	12	0	-	0	0	.
chr5	40677490	40677491	chr5:40677491:G:A	rs11956743	G	A	G	Hoxd9_MA0913.1	12	0	-	0	0	.
chr5	40694051	40694052	chr5:40694052:T:C	rs4957342	T	C	A	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr5	40791781	40791782	chr5:40791782:C:T	rs13361707	C	T	C	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr5	41128649	41128650	chr5:41128650:T:C	rs68183441	T	C	T	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr5	41649946	41649947	chr5:41649947:C:T	rs316730	C	T	T	Hoxd9_MA0913.1	26	0	+	0	0	.
chr5	42275127	42275128	chr5:42275128:G:A	rs6888449	G	A	G	Hoxd9_MA0913.1	27	0	+	0	0	.
chr5	42606763	42606764	chr5:42606764:C:T	rs59707000	C	T	C	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr5	42610306	42610307	chr5:42610307:C:T	rs13354167	C	T	C	Hoxd9_MA0913.1	12	0	-	0	0	.
chr5	42843152	42843153	chr5:42843153:G:C	rs6897301	G	C	.	Hoxd9_MA0913.1	25	0	-	0	0	.
chr5	42843189	42843190	chr5:42843190:A:G	rs62370957	A	G	.	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr5	43039051	43039052	chr5:43039052:A:G	rs72746770	A	G	A	Hoxd9_MA0913.1	18	0	+	0	0	.
chr5	43110855	43110856	chr5:43110856:T:G	rs71627575	T	G	T	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr5	43308738	43308739	chr5:43308739:T:C	rs10941623	T	C	T	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr5	43515595	43515596	chr5:43515596:A:G	rs370922775	A	G	A	Hoxd9_MA0913.1	25	0	-	0	0	.
chr5	43839209	43839210	chr5:43839210:A:G	rs7724195	A	G	A	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr5	43950983	43950984	chr5:43950984:A:G	rs57717350	A	G	A	Hoxd9_MA0913.1	8	1	+	9.168223885413955	7.595255307956012	GTAATTAAAT
chr5	44325219	44325220	chr5:44325220:A:T	rs4498258	A	T	A	Hoxd9_MA0913.1	7	1	+	8.490366725581566	5.196519973863136	GTCATTAAAA
chr5	45029764	45029765	chr5:45029765:C:G	rs7716101	C	G	G	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr5	50968337	50968338	chr5:50968338:C:T	rs250233	C	T	T	Hoxd9_MA0913.1	12	0	-	0	0	.
chr5	51525075	51525076	chr5:51525076:A:G	rs1479615	A	G	A	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr5	51802806	51802807	chr5:51802807:A:T	rs7725682	A	T	A	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr5	52077848	52077849	chr5:52077849:T:G	rs76114223	T	G	T	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr5	52748678	52748679	chr5:52748679:C:A	rs164656	C	A	C	Hoxd9_MA0913.1	28	0	+	0	0	.
chr5	52803084	52803085	chr5:52803085:G:A	rs17209947	G	A	G	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr5	52854056	52854057	chr5:52854057:C:A	rs73102276	C	A	C	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr5	53211811	53211812	chr5:53211812:A:G	rs2897475	A	G	G	Hoxd9_MA0913.1	23	0	+	0	0	.
chr5	53318562	53318563	chr5:53318563:A:C	rs80287464	A	C	A	Hoxd9_MA0913.1	22	0	-	0	0	.
chr5	53445634	53445635	chr5:53445635:T:A	rs79170297	T	A	T	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr5	53507291	53507292	chr5:53507292:C:A	rs1582554	C	A	C	Hoxd9_MA0913.1	16	0	-	0	0	.
chr5	53571499	53571500	chr5:53571500:T:G	rs7728496	T	G	G	Hoxd9_MA0913.1	28	0	-	0	0	.
chr5	53607784	53607785	chr5:53607785:A:G	rs377077	A	G	A	Hoxd9_MA0913.1	9	1	+	9.801341972390743	8.334848631621252	GCAATAAAAA
chr5	53749793	53749794	chr5:53749794:C:A	rs79028645	C	A	C	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr5	53871249	53871250	chr5:53871250:C:T	rs13186279	C	T	C	Hoxd9_MA0913.1	1	1	+	8.812437826870472	8.464302199141448	ACAATTAAAA
chr5	54086325	54086326	chr5:54086326:A:G	rs10060587	A	G	A	Hoxd9_MA0913.1	5	1	-	8.293678209511443	4.900046860251881	GCAATTAAAG
chr5	54090940	54090941	chr5:54090941:G:T	chr5:54090941:G:T	G	T	G	Hoxd9_MA0913.1	9	1	-	7.7976343601680895	8.879672775420401	GCCATAAAAC
chr5	54211407	54211408	chr5:54211408:T:C	rs16882451	T	C	T	Hoxd9_MA0913.1	4	1	+	7.932552609785828	4.64041835801085	GCAGTTAAAA
chr5	54288723	54288724	chr5:54288724:C:T	rs17441397	C	T	T	Hoxd9_MA0913.1	19	0	+	0	0	.
chr5	54339533	54339534	chr5:54339534:T:G	rs6862153	T	G	T	Hoxd9_MA0913.1	25	0	+	0	0	.
chr5	54416149	54416150	chr5:54416150:G:C	rs10079650	G	C	G	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr5	54416181	54416182	chr5:54416182:A:T	rs60376733	A	T	A	Hoxd9_MA0913.1	21	0	+	0	0	.
chr5	54667070	54667071	chr5:54667071:G:C	rs11742037	G	C	G	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr5	54718339	54718340	chr5:54718340:T:G	rs6889854	T	G	T	Hoxd9_MA0913.1	2	1	-	8.853608248980283	7.931939052009941	ACAATAAAAA
chr5	54804198	54804199	chr5:54804199:G:A	rs4865873	G	A	G	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr5	54829748	54829749	chr5:54829749:A:G	rs9968754	A	G	G	Hoxd9_MA0913.1	14	0	+	0	0	.
chr5	55211524	55211525	chr5:55211525:A:C	rs4865919	A	C	A	Hoxd9_MA0913.1	16	0	-	0	0	.
chr5	55351615	55351616	chr5:55351616:G:A	rs10078550	G	A	G	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr5	55449571	55449572	chr5:55449572:G:A	rs114751484	G	A	G	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr5	55594973	55594974	chr5:55594974:T:C	rs7721054	T	C	C	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr5	55609010	55609011	chr5:55609011:A:G	rs11748878	A	G	G	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr5	55998499	55998500	chr5:55998500:C:A	rs6870870	C	A	A	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr5	56058738	56058739	chr5:56058739:A:G	rs112928870	A	G	A	Hoxd9_MA0913.1	25	0	-	0	0	.
chr5	56172748	56172749	chr5:56172749:A:G	rs160495	A	G	A	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr5	56290819	56290820	chr5:56290820:A:G	rs115110096	A	G	A	Hoxd9_MA0913.1	20	0	+	0	0	.
chr5	56375709	56375710	chr5:56375710:A:C	rs7732387	A	C	A	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr5	56727255	56727256	chr5:56727256:T:G	rs16886165	T	G	G	Hoxd9_MA0913.1	7	1	-	8.282172881897674	4.988326130179244	CCAATTAAAA
chr5	56798886	56798887	chr5:56798887:T:C	rs62355938	T	C	T	Hoxd9_MA0913.1	2	1	-	7.973723031895638	6.29626459043754	GCAGTAAAAA
chr5	57103299	57103300	chr5:57103300:C:T	rs35217761	C	T	C	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr5	57172660	57172661	chr5:57172661:T:A	rs78842236	T	A	T	Hoxd9_MA0913.1	6	1	-	8.281840948251881	5.8585210007178965	GCAATTAATA
chr5	57779825	57779826	chr5:57779826:A:G	rs1861057	A	G	G	Hoxd9_MA0913.1	2	1	+	9.168223885413955	7.490765443955856	GTAATTAAAT
chr5	57779826	57779827	chr5:57779827:A:G	rs1861058	A	G	G	Hoxd9_MA0913.1	3	1	+	9.168223885413955	7.340604944918851	GTAATTAAAT
chr5	57932893	57932894	chr5:57932894:T:C	rs13183932	T	C	T	Hoxd9_MA0913.1	17	0	-	0	0	.
chr5	58019542	58019543	chr5:58019543:T:G	rs16887694	T	G	T	Hoxd9_MA0913.1	10	0	-	0	0	.
chr5	58047750	58047751	chr5:58047751:A:G	rs1352615	A	G	A	Hoxd9_MA0913.1	8	1	+	7.7976343601680895	6.224665782710147	GCCATAAAAC
chr5	58259041	58259042	chr5:58259042:T:C	rs143237439	T	C	T	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr5	58314871	58314872	chr5:58314872:A:G	chr5:58314872:A:G	A	G	A	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr5	58359674	58359675	chr5:58359675:C:T	rs7732365	C	T	C	Hoxd9_MA0913.1	1	1	+	7.984561357794846	7.636425730065822	GCAATAAAGT
chr5	58666918	58666919	chr5:58666919:A:G	rs17280874	A	G	A	Hoxd9_MA0913.1	13	0	-	0	0	.
chr5	58666950	58666951	chr5:58666951:T:C	rs9292171	T	C	T	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr5	59036267	59036268	chr5:59036268:A:G	rs2291852	A	G	A	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr5	59036379	59036380	chr5:59036380:A:G	rs139802647	A	G	A	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr5	59189085	59189086	chr5:59189086:A:G	chr5:59189086:A:G	A	G	A	Hoxd9_MA0913.1	29	0	-	0	0	.
chr5	59515796	59515797	chr5:59515797:G:A	rs7717802	G	A	A	Hoxd9_MA0913.1	13	0	+	0	0	.
chr5	59645384	59645385	chr5:59645385:G:T	rs298026	G	T	G	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr5	59800130	59800131	chr5:59800131:C:A	rs796492278	C	A	C	Hoxd9_MA0913.1	25	0	+	0	0	.
chr5	59982365	59982366	chr5:59982366:G:A	rs10044523	G	A	G	Hoxd9_MA0913.1	20	0	-	0	0	.
chr5	60686336	60686337	chr5:60686337:C:T	rs80138086	C	T	c	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr5	61123549	61123550	chr5:61123550:T:C	rs13190305	T	C	T	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr5	61307868	61307869	chr5:61307869:A:G	rs4235486	A	G	G	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr5	61370713	61370714	chr5:61370714:T:A	rs1360522078	T	A	T	Hoxd9_MA0913.1	18	0	-	0	0	.
chr5	61673044	61673045	chr5:61673045:T:C	rs16893470	T	C	T	Hoxd9_MA0913.1	15	0	+	0	0	.
chr5	61738840	61738841	chr5:61738841:G:A	rs6449551	G	A	G	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr5	61995422	61995423	chr5:61995423:T:C	rs76402420	T	C	T	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr5	62269013	62269014	chr5:62269014:C:T	rs6882514	C	T	C	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr5	62732868	62732869	chr5:62732869:T:C	rs568766807	T	C	T	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr5	62732874	62732875	chr5:62732875:A:G	rs976685631	A	G	A	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr5	62774854	62774855	chr5:62774855:T:C	rs1445932	T	C	C	Hoxd9_MA0913.1	24	0	-	0	0	.
chr5	62785706	62785707	chr5:62785707:A:G	rs2642735	A	G	A	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr5	64853256	64853257	chr5:64853257:C:T	rs12655239	C	T	T	Hoxd9_MA0913.1	8	1	-	7.984561357794846	9.55752993525279	GCAATAAAGT
chr5	65019015	65019016	chr5:65019016:C:G	rs6449768	C	G	C	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr5	65019037	65019038	chr5:65019038:A:G	rs2915439	A	G	A	Hoxd9_MA0913.1	2	1	+	8.853608248980283	7.176149807522183	ACAATAAAAA
chr5	65035189	65035190	chr5:65035190:T:C	rs6896396	T	C	T	Hoxd9_MA0913.1	4	1	+	9.453206344661718	6.161072092886739	GTAATAAAAA
chr5	65136324	65136325	chr5:65136325:G:A	rs186849296	G	A	G	Hoxd9_MA0913.1	14	0	-	0	0	.
chr5	65185615	65185616	chr5:65185616:G:A	rs115548049	G	A	G	Hoxd9_MA0913.1	2	1	+	8.082713108822833	9.760171550280933	GCGATTAAAA
chr5	65651381	65651382	chr5:65651382:G:A	rs154852	G	A	A	Hoxd9_MA0913.1	26	0	-	0	0	.
chr5	65808097	65808098	chr5:65808098:G:A	rs12657670	G	A	G	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr5	65907436	65907437	chr5:65907437:T:A	rs2441128	T	A	T	Hoxd9_MA0913.1	2	1	-	8.812437826870472	2.3620937950196907	ACAATTAAAA
chr5	66576891	66576892	chr5:66576892:T:C	rs67136280	T	C	T	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr5	66789510	66789511	chr5:66789511:T:G	rs1982328	T	G	G	Hoxd9_MA0913.1	14	0	-	0	0	.
chr5	66923204	66923205	chr5:66923205:T:C	rs56718273	T	C	T	Hoxd9_MA0913.1	26	0	+	0	0	.
chr5	66933388	66933389	chr5:66933389:G:A	rs16895988	G	A	A	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr5	67180022	67180023	chr5:67180023:T:A	rs6890674	T	A	A	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr5	67204727	67204728	chr5:67204728:T:C	rs6891720	T	C	C	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr5	67411798	67411799	chr5:67411799:G:C	rs167605	G	C	G	Hoxd9_MA0913.1	15	0	-	0	0	.
chr5	67622832	67622833	chr5:67622833:C:A	rs116701090	C	A	C	Hoxd9_MA0913.1	25	0	-	0	0	.
chr5	67870679	67870680	chr5:67870680:A:G	rs1490801	A	G	g	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr5	67983551	67983552	chr5:67983552:T:C	rs28654894	T	C	T	Hoxd9_MA0913.1	16	0	+	0	0	.
chr5	68331824	68331825	chr5:68331825:A:G	rs1394048870	A	G	A	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr5	68465472	68465473	chr5:68465473:T:G	rs75974106	T	G	T	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr5	68534106	68534107	chr5:68534107:T:A	rs941696445	T	A	T	Hoxd9_MA0913.1	12	0	-	0	0	.
chr5	68746768	68746769	chr5:68746769:C:G	rs66941667	C	G	C	Hoxd9_MA0913.1	27	0	+	0	0	.
chr5	68749984	68749985	chr5:68749985:C:T	rs113163848	C	T	C	Hoxd9_MA0913.1	19	0	+	0	0	.
chr5	68799424	68799425	chr5:68799425:T:G	rs6898750	T	G	T	Hoxd9_MA0913.1	15	0	-	0	0	.
chr5	69235676	69235677	chr5:69235677:T:C	rs2972387	T	C	C	Hoxd9_MA0913.1	5	1	-	7.973723031895638	1.7520598789997708	GCAGTAAAAA
chr5	69368687	69368688	chr5:69368688:C:T	rs3756402	C	T	C	Hoxd9_MA0913.1	1	1	+	9.55752993525279	9.209394307523764	GCAATAAAAT
chr5	69486779	69486780	chr5:69486780:G:T	rs3846487	G	T	T	Hoxd9_MA0913.1	14	0	+	0	0	.
chr5	71806947	71806948	chr5:71806948:T:C	rs12516463	T	C	T	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr5	72068554	72068555	chr5:72068555:T:A	rs1026509	T	A	A	Hoxd9_MA0913.1	19	0	+	0	0	.
chr5	72111716	72111717	chr5:72111717:G:C	rs1979309	G	C	C	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr5	72195134	72195135	chr5:72195135:A:G	rs1866374	A	G	G	Hoxd9_MA0913.1	3	1	+	8.323343304007485	6.495724363512382	CCAATAAAAA
chr5	72388390	72388391	chr5:72388391:A:C	rs10474048	A	C	A	Hoxd9_MA0913.1	10	0	-	0	0	.
chr5	72874567	72874568	chr5:72874568:T:A	rs266432	T	A	T	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr5	73050616	73050617	chr5:73050617:C:T	rs114045503	C	T	C	Hoxd9_MA0913.1	20	0	-	0	0	.
chr5	73181307	73181308	chr5:73181308:T:A	rs9293532	T	A	T	Hoxd9_MA0913.1	21	0	-	0	0	.
chr5	73442465	73442466	chr5:73442466:G:A	rs73762085	G	A	G	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr5	73531562	73531563	chr5:73531563:C:G	rs6868492	C	G	G	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr5	73780461	73780462	chr5:73780462:A:G	chr5:73780462:A:G	A	G	A	Hoxd9_MA0913.1	23	0	+	0	0	.
chr5	73831323	73831324	chr5:73831324:G:A	rs75463560	G	A	A	Hoxd9_MA0913.1	25	0	-	0	0	.
chr5	73915147	73915148	chr5:73915148:G:T	rs282404	G	T	G	Hoxd9_MA0913.1	0	1	-	8.323343304007485	8.853608248980283	CCAATAAAAA
chr5	73964973	73964974	chr5:73964974:C:T	rs399072	C	T	C	Hoxd9_MA0913.1	1	1	+	8.853608248980283	8.505472621251258	ACAATAAAAA
chr5	73990919	73990920	chr5:73990920:T:C	rs10058435	T	C	T	Hoxd9_MA0913.1	25	0	-	0	0	.
chr5	74419206	74419207	chr5:74419207:A:G	rs295689	A	G	A	Hoxd9_MA0913.1	3	1	+	8.323343304007485	6.495724363512382	CCAATAAAAA
chr5	74464581	74464582	chr5:74464582:T:C	rs2035226	T	C	T	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr5	74507557	74507558	chr5:74507558:G:A	rs16871923	G	A	G	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr5	74507591	74507592	chr5:74507592:A:G	rs737541	A	G	G	Hoxd9_MA0913.1	16	0	+	0	0	.
chr5	74543991	74543992	chr5:74543992:G:A	rs390755	G	A	A	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr5	74853904	74853905	chr5:74853905:A:G	rs16872346	A	G	G	Hoxd9_MA0913.1	0	1	+	8.853608248980283	9.801341972390743	ACAATAAAAA
chr5	75640570	75640571	chr5:75640571:G:A	rs77302640	G	A	G	Hoxd9_MA0913.1	0	1	+	9.51635951314298	8.568625789732518	GCAATTAAAT
chr5	76025151	76025152	chr5:76025152:C:T	rs114699836	C	T	C	Hoxd9_MA0913.1	25	0	+	0	0	.
chr5	76326988	76326989	chr5:76326989:C:A	rs3733860	C	A	C	Hoxd9_MA0913.1	12	0	-	0	0	.
chr5	76332163	76332164	chr5:76332164:T:C	rs16873320	T	C	C	Hoxd9_MA0913.1	3	1	-	7.984561357794846	6.156942417299742	GCAATAAAGT
chr5	76405133	76405134	chr5:76405134:G:A	rs114379804	G	A	G	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr5	76519378	76519379	chr5:76519379:A:G	rs62361967	A	G	A	Hoxd9_MA0913.1	22	0	-	0	0	.
chr5	76544608	76544609	chr5:76544609:A:G	rs16873478	A	G	A	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr5	76582832	76582833	chr5:76582833:T:C	rs62362012	T	C	T	Hoxd9_MA0913.1	27	0	-	0	0	.
chr5	76621807	76621808	chr5:76621808:A:G	rs2069656	A	G	A	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr5	76641747	76641748	chr5:76641748:A:G	rs1323535427	A	G	A	Hoxd9_MA0913.1	18	0	-	0	0	.
chr5	76641777	76641778	chr5:76641778:G:T	rs114677303	G	T	G	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr5	76643433	76643434	chr5:76643434:A:G	rs2910820	A	G	A	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr5	76938353	76938354	chr5:76938354:A:C	rs1715757	A	C	A	Hoxd9_MA0913.1	11	0	-	0	0	.
chr5	76979118	76979119	chr5:76979119:G:A	rs66835096	G	A	G	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr5	77010348	77010349	chr5:77010349:G:A	rs10076373	G	A	G	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr5	77010369	77010370	chr5:77010370:A:G	rs185852314	A	G	A	Hoxd9_MA0913.1	3	1	+	8.187202972822991	6.359584032327886	GCAATTAAGA
chr5	77010392	77010393	chr5:77010393:C:T	rs149191289	C	T	C	Hoxd9_MA0913.1	26	0	+	0	0	.
chr5	77067450	77067451	chr5:77067451:A:G	rs72765119	A	G	A	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr5	77078251	77078252	chr5:77078252:T:C	rs6861535	T	C	C	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr5	77709927	77709928	chr5:77709928:T:C	rs351877	T	C	T	Hoxd9_MA0913.1	6	1	-	9.209394307523764	2.3939736397444245	GTAATAAAAT
chr5	77719019	77719020	chr5:77719020:A:C	rs2662379	A	C	C	Hoxd9_MA0913.1	3	1	+	8.812437826870472	4.346207156470417	ACAATTAAAA
chr5	78162486	78162487	chr5:78162487:G:A	rs1185402764	G	A	G	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr5	78162517	78162518	chr5:78162518:A:T	rs78244103	A	T	A	Hoxd9_MA0913.1	7	1	+	7.973723031895638	4.679876280177208	GCAGTAAAAA
chr5	78374968	78374969	chr5:78374969:T:G	rs10078289	T	G	T	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr5	78501822	78501823	chr5:78501823:A:C	rs11738126	A	C	A	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr5	78587056	78587057	chr5:78587057:C:T	rs1866950	C	T	T	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr5	78706789	78706790	chr5:78706790:C:T	rs920583	C	T	C	Hoxd9_MA0913.1	28	0	-	0	0	.
chr5	78706827	78706828	chr5:78706828:T:C	rs920584	T	C	T	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr5	78798738	78798739	chr5:78798739:C:T	rs77591443	C	T	C	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr5	78985549	78985550	chr5:78985550:T:C	rs163127	T	C	C	Hoxd9_MA0913.1	16	0	+	0	0	.
chr5	79176030	79176031	chr5:79176031:T:C	rs10044259	T	C	T	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr5	79345429	79345430	chr5:79345430:C:A	rs9293775	C	A	C	Hoxd9_MA0913.1	0	1	-	9.801341972390743	6.764199276437873	GCAATAAAAA
chr5	79465049	79465050	chr5:79465050:G:T	rs147931288	G	T	G	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr5	79812712	79812713	chr5:79812713:C:T	rs34018081	C	T	C	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr5	79884423	79884424	chr5:79884424:C:T	rs169083	C	T	C	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr5	79975526	79975527	chr5:79975527:T:C	rs13354864	T	C	C	Hoxd9_MA0913.1	20	0	+	0	0	.
chr5	79993270	79993271	chr5:79993271:T:C	rs75676285	T	C	T	Hoxd9_MA0913.1	23	0	-	0	0	.
chr5	80141750	80141751	chr5:80141751:G:A	rs116113310	G	A	G	Hoxd9_MA0913.1	24	0	-	0	0	.
chr5	80151420	80151421	chr5:80151421:G:A	rs77438527	G	A	G	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr5	80400585	80400586	chr5:80400586:A:G	rs114012267	A	G	A	Hoxd9_MA0913.1	21	0	-	0	0	.
chr5	80481067	80481068	chr5:80481068:G:C	rs701380	G	C	G	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr5	80655210	80655211	chr5:80655211:G:A	rs6151598	G	A	G	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr5	80655212	80655213	chr5:80655213:A:G	rs6151599	A	G	A	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr5	80937717	80937718	chr5:80937718:G:C	rs112104133	G	C	G	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr5	80968182	80968183	chr5:80968183:C:T	rs76222406	C	T	C	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr5	81907383	81907384	chr5:81907384:C:T	rs6881638	C	T	T	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr5	82294250	82294251	chr5:82294251:A:T	rs6870335	A	T	A	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr5	82689579	82689580	chr5:82689580:G:A	rs191005619	G	A	G	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr5	82718977	82718978	chr5:82718978:C:G	rs1544787	C	G	C	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr5	82731112	82731113	chr5:82731113:C:T	rs374461747	C	T	C	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr5	82731116	82731117	chr5:82731117:T:C	chr5:82731117:T:C	T	C	T	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr5	82807500	82807501	chr5:82807501:A:G	rs35308877	A	G	A	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr5	82863632	82863633	chr5:82863633:T:G	rs66811233	T	G	T	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr5	83468235	83468236	chr5:83468236:G:A	rs33610	G	A	A	Hoxd9_MA0913.1	14	0	+	0	0	.
chr5	83678793	83678794	chr5:83678794:A:G	rs2216238	A	G	A	Hoxd9_MA0913.1	18	0	+	0	0	.
chr5	83856805	83856806	chr5:83856806:A:G	rs61702169	A	G	A	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr5	84682677	84682678	chr5:84682678:G:A	rs6866089	G	A	g	Hoxd9_MA0913.1	20	0	+	0	0	.
chr5	84794577	84794578	chr5:84794578:T:A	rs10038379	T	A	A	Hoxd9_MA0913.1	7	1	-	8.32301137036169	5.029164618643261	GCAATAAATA
chr5	84794578	84794579	chr5:84794579:T:A	rs10038380	T	A	A	Hoxd9_MA0913.1	6	1	-	8.32301137036169	5.899691422827706	GCAATAAATA
chr5	85108676	85108677	chr5:85108677:T:C	rs7726526	T	C	T	Hoxd9_MA0913.1	27	0	-	0	0	.
chr5	85514193	85514194	chr5:85514194:G:A	rs10942388	G	A	G	Hoxd9_MA0913.1	11	0	-	0	0	.
chr5	85514201	85514202	chr5:85514202:T:C	rs552273	T	C	T	Hoxd9_MA0913.1	3	1	-	8.323343304007485	6.495724363512382	CCAATAAAAA
chr5	85816899	85816900	chr5:85816900:T:C	rs4920842	T	C	T	Hoxd9_MA0913.1	15	0	+	0	0	.
chr5	86666193	86666194	chr5:86666194:A:C	rs12697767	A	C	C	Hoxd9_MA0913.1	26	0	+	0	0	.
chr5	86841147	86841148	chr5:86841148:C:A	rs7701313	C	A	A	Hoxd9_MA0913.1	14	0	-	0	0	.
chr5	88292208	88292209	chr5:88292209:A:G	rs4916899	A	G	G	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr5	88392734	88392735	chr5:88392735:C:A	rs12513530	C	A	A	Hoxd9_MA0913.1	0	1	-	9.168223885413955	6.131081189461085	GTAATTAAAT
chr5	88725709	88725710	chr5:88725710:T:G	rs34320	T	G	T	Hoxd9_MA0913.1	28	0	-	0	0	.
chr5	88942370	88942371	chr5:88942371:T:C	rs150433350	T	C	T	Hoxd9_MA0913.1	19	0	-	0	0	.
chr5	89180436	89180437	chr5:89180437:A:G	rs10057059	A	G	A	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr5	90356068	90356069	chr5:90356069:A:T	rs7349826	A	T	A	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr5	90645531	90645532	chr5:90645532:A:G	rs113186992	A	G	A	Hoxd9_MA0913.1	6	1	+	7.932552609785828	1.1171319420064885	GCAGTTAAAA
chr5	91053445	91053446	chr5:91053446:A:G	rs12188249	A	G	A	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr5	91121775	91121776	chr5:91121776:T:C	rs2973444	T	C	T	Hoxd9_MA0913.1	19	0	+	0	0	.
chr5	91122601	91122602	chr5:91122602:G:A	rs2950855	G	A	A	Hoxd9_MA0913.1	17	0	-	0	0	.
chr5	91214991	91214992	chr5:91214992:A:G	rs7341115	A	G	G	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr5	92372929	92372930	chr5:92372930:T:G	rs900942768	T	G	T	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr5	92795586	92795587	chr5:92795587:T:C	rs10866772	T	C	T	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr5	92795608	92795609	chr5:92795609:T:C	rs2112412	T	C	C	Hoxd9_MA0913.1	14	0	+	0	0	.
chr5	92802750	92802751	chr5:92802751:A:G	rs1363283	A	G	A	Hoxd9_MA0913.1	29	0	-	0	0	.
chr5	93058871	93058872	chr5:93058872:G:A	rs1390614	G	A	A	Hoxd9_MA0913.1	18	0	+	0	0	.
chr5	93330924	93330925	chr5:93330925:A:G	rs114712611	A	G	A	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr5	93426715	93426716	chr5:93426716:C:T	rs73133217	C	T	C	Hoxd9_MA0913.1	18	0	-	0	0	.
chr5	94539071	94539072	chr5:94539072:C:T	rs4869214	C	T	T	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr5	94693103	94693104	chr5:94693104:T:C	rs1392233565	T	C	T	Hoxd9_MA0913.1	13	0	+	0	0	.
chr5	94850811	94850812	chr5:94850812:C:A	rs159598	C	A	A	Hoxd9_MA0913.1	11	0	-	0	0	.
chr5	94906953	94906954	chr5:94906954:A:T	rs10476617	A	T	A	Hoxd9_MA0913.1	12	0	-	0	0	.
chr5	94949889	94949890	chr5:94949890:G:A	rs159018	G	A	G	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr5	94968862	94968863	chr5:94968863:A:G	rs32920	A	G	A	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr5	95148752	95148753	chr5:95148753:T:G	rs183470653	T	G	T	Hoxd9_MA0913.1	14	0	-	0	0	.
chr5	95673031	95673032	chr5:95673032:G:A	rs6890085	G	A	g	Hoxd9_MA0913.1	15	0	+	0	0	.
chr5	95783703	95783704	chr5:95783704:T:C	rs888808	T	C	T	Hoxd9_MA0913.1	9	1	-	8.812437826870472	7.34594448610098	ACAATTAAAA
chr5	95953693	95953694	chr5:95953694:A:G	rs6898399	A	G	A	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr5	96083817	96083818	chr5:96083818:A:T	rs141226180	A	T	A	Hoxd9_MA0913.1	4	1	-	8.293678209511443	5.606426785325284	GCAATTAAAG
chr5	96289193	96289194	chr5:96289194:C:T	rs6556914	C	T	C	Hoxd9_MA0913.1	18	0	-	0	0	.
chr5	96888416	96888417	chr5:96888417:A:G	rs1559354	A	G	g	Hoxd9_MA0913.1	17	0	-	0	0	.
chr5	96962789	96962790	chr5:96962790:G:A	rs79128738	G	A	G	Hoxd9_MA0913.1	12	0	-	0	0	.
chr5	97073358	97073359	chr5:97073359:T:A	rs59781414	T	A	T	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr5	97643952	97643953	chr5:97643953:C:T	rs72775970	C	T	C	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr5	97803743	97803744	chr5:97803744:G:A	rs73145378	G	A	G	Hoxd9_MA0913.1	27	0	-	0	0	.
chr5	97979255	97979256	chr5:97979256:T:C	rs9314217	T	C	T	Hoxd9_MA0913.1	1	1	+	8.371167929409406	8.719303557138431	GTAATAAAAC
chr5	98131770	98131771	chr5:98131771:C:T	rs149435926	C	T	C	Hoxd9_MA0913.1	14	0	+	0	0	.
chr5	98131780	98131781	chr5:98131781:G:T	rs78071233	G	T	G	Hoxd9_MA0913.1	24	0	+	0	0	.
chr5	98170726	98170727	chr5:98170727:T:A	rs35945862	T	A	T	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr5	98325001	98325002	chr5:98325002:A:G	rs60805392	A	G	A	Hoxd9_MA0913.1	29	0	-	0	0	.
chr5	98473449	98473450	chr5:98473450:T:G	rs142903543	T	G	T	Hoxd9_MA0913.1	8	1	-	8.812437826870472	6.812774187217931	ACAATTAAAA
chr5	98474358	98474359	chr5:98474359:C:A	rs4577723	C	A	C	Hoxd9_MA0913.1	24	0	-	0	0	.
chr5	98474988	98474989	chr5:98474989:G:A	rs10074098	G	A	G	Hoxd9_MA0913.1	11	0	+	0	0	.
chr5	98771577	98771578	chr5:98771578:T:C	rs79139926	T	C	T	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr5	98773217	98773218	chr5:98773218:G:A	rs116103640	G	A	G	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr5	98938896	98938897	chr5:98938897:A:G	rs17166454	A	G	A	Hoxd9_MA0913.1	14	0	+	0	0	.
chr5	99615451	99615452	chr5:99615452:G:A	rs3850905	G	A	A	Hoxd9_MA0913.1	15	0	+	0	0	.
chr5	99716168	99716169	chr5:99716169:G:A	rs536812352	G	A	g	Hoxd9_MA0913.1	0	1	+	8.329997507299597	7.382263783889136	GTAATTAAAC
chr5	100049819	100049820	chr5:100049820:A:G	chr5:100049820:A:G	A	G	-	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr5	100890825	100890826	chr5:100890826:C:T	rs74559359	C	T	C	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr5	101429442	101429443	chr5:101429443:T:C	rs412683	T	C	T	Hoxd9_MA0913.1	29	0	-	0	0	.
chr5	101788183	101788184	chr5:101788184:T:C	rs75170310	T	C	T	Hoxd9_MA0913.1	2	1	-	8.812437826870472	7.1349793854123735	ACAATTAAAA
chr5	101876392	101876393	chr5:101876393:C:A	rs66779092	C	A	C	Hoxd9_MA0913.1	12	0	+	0	0	.
chr5	102617411	102617412	chr5:102617412:C:T	rs10067699	C	T	T	Hoxd9_MA0913.1	29	0	+	0	0	.
chr5	102747159	102747160	chr5:102747160:A:C	rs419305	A	C	C	Hoxd9_MA0913.1	4	1	-	8.2283733949328	4.93623914315782	GCAATAAAGA
chr5	102807913	102807914	chr5:102807914:G:A	rs37013	G	A	A	Hoxd9_MA0913.1	26	0	+	0	0	.
chr5	102857326	102857327	chr5:102857327:C:T	rs74684959	C	T	C	Hoxd9_MA0913.1	23	0	-	0	0	.
chr5	102863955	102863956	chr5:102863956:T:C	rs145784602	T	C	T	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr5	103014265	103014266	chr5:103014266:G:C	rs3776860	G	C	C	Hoxd9_MA0913.1	0	1	+	8.531537147691377	7.053538479308118	GTCATAAAAA
chr5	103174663	103174664	chr5:103174664:A:G	rs150914083	A	G	A	Hoxd9_MA0913.1	15	0	-	0	0	.
chr5	103390235	103390236	chr5:103390236:T:A	rs13188887	T	A	T	Hoxd9_MA0913.1	9	1	-	9.453206344661718	9.209394307523764	GTAATAAAAA
chr5	103514566	103514567	chr5:103514567:G:A	chr5:103514567:G:A	G	A	G	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr5	103589966	103589967	chr5:103589967:G:T	rs17155526	G	T	G	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr5	103889472	103889473	chr5:103889473:T:C	rs969637	T	C	t	Hoxd9_MA0913.1	3	1	-	8.812437826870472	6.984818886375368	ACAATTAAAA
chr5	104159519	104159520	chr5:104159520:C:T	rs4067547	C	T	C	Hoxd9_MA0913.1	26	0	-	0	0	.
chr5	105238746	105238747	chr5:105238747:G:A	rs28582508	G	A	G	Hoxd9_MA0913.1	13	0	-	0	0	.
chr5	105532160	105532161	chr5:105532161:T:C	rs13185979	T	C	T	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr5	106014724	106014725	chr5:106014725:T:C	rs4957840	T	C	T	Hoxd9_MA0913.1	4	1	+	8.853608248980283	5.561473997205303	ACAATAAAAA
chr5	106162744	106162745	chr5:106162745:T:C	rs62377572	T	C	T	Hoxd9_MA0913.1	20	0	+	0	0	.
chr5	106681248	106681249	chr5:106681249:T:C	rs1437636	T	C	T	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr5	106758059	106758060	chr5:106758060:G:A	rs1036566	G	A	A	Hoxd9_MA0913.1	19	0	+	0	0	.
chr5	107182742	107182743	chr5:107182743:T:C	rs6871670	T	C	T	Hoxd9_MA0913.1	13	0	-	0	0	.
chr5	107263429	107263430	chr5:107263430:C:T	rs34562	C	T	C	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr5	107293919	107293920	chr5:107293920:A:G	rs253110	A	G	A	Hoxd9_MA0913.1	13	0	+	0	0	.
chr5	107437216	107437217	chr5:107437217:T:G	rs149498	T	G	G	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr5	107468216	107468217	chr5:107468217:T:C	rs151957	T	C	T	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr5	107474596	107474597	chr5:107474597:G:T	rs114555371	G	T	G	Hoxd9_MA0913.1	1	1	-	8.678133135028622	6.258314759003362	GCAATTAAAC
chr5	107517054	107517055	chr5:107517055:G:A	rs62355605	G	A	g	Hoxd9_MA0913.1	16	0	+	0	0	.
chr5	107526822	107526823	chr5:107526823:C:T	rs77284462	C	T	c	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr5	107533332	107533333	chr5:107533333:C:A	rs341278	C	A	C	Hoxd9_MA0913.1	21	0	+	0	0	.
chr5	107808267	107808268	chr5:107808268:C:T	rs6596751	C	T	C	Hoxd9_MA0913.1	21	0	+	0	0	.
chr5	108003432	108003433	chr5:108003433:T:C	rs138954312	T	C	T	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr5	108061976	108061977	chr5:108061977:G:T	rs286755	G	T	T	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr5	108382049	108382050	chr5:108382050:G:A	rs79719366	G	A	G	Hoxd9_MA0913.1	15	0	-	0	0	.
chr5	108382071	108382072	chr5:108382072:G:A	rs113940029	G	A	G	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr5	108385022	108385023	chr5:108385023:T:C	rs1355375	T	C	C	Hoxd9_MA0913.1	8	1	-	8.287725110553424	6.714756533095481	GTCATAAAAT
chr5	108541921	108541922	chr5:108541922:G:A	rs61500204	G	A	G	Hoxd9_MA0913.1	12	0	-	0	0	.
chr5	108579351	108579352	chr5:108579352:T:C	rs116101870	T	C	T	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr5	108983694	108983695	chr5:108983695:C:T	rs73778378	C	T	C	Hoxd9_MA0913.1	19	0	-	0	0	.
chr5	109038564	109038565	chr5:109038565:C:T	rs72790571	C	T	C	Hoxd9_MA0913.1	13	0	-	0	0	.
chr5	109408287	109408288	chr5:109408288:G:A	rs79612120	G	A	G	Hoxd9_MA0913.1	13	0	+	0	0	.
chr5	109408345	109408346	chr5:109408346:A:G	rs62375647	A	G	A	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr5	109898332	109898333	chr5:109898333:A:G	rs10477979	A	G	A	Hoxd9_MA0913.1	21	0	-	0	0	.
chr5	109901827	109901828	chr5:109901828:T:G	rs1432811	T	G	T	Hoxd9_MA0913.1	11	0	-	0	0	.
chr5	110034645	110034646	chr5:110034646:C:T	rs1869723	C	T	C	Hoxd9_MA0913.1	15	0	-	0	0	.
chr5	110256402	110256403	chr5:110256403:T:C	rs894429700	T	C	T	Hoxd9_MA0913.1	28	0	-	0	0	.
chr5	111133791	111133792	chr5:111133792:T:C	rs6863151	T	C	C	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr5	111157941	111157942	chr5:111157942:G:A	rs463467	G	A	G	Hoxd9_MA0913.1	29	0	+	0	0	.
chr5	111255576	111255577	chr5:111255577:T:A	rs138839352	T	A	T	Hoxd9_MA0913.1	9	1	-	8.2283733949328	7.984561357794846	GCAATAAAGA
chr5	111720999	111721000	chr5:111721000:A:T	rs7707046	A	T	T	Hoxd9_MA0913.1	8	1	+	8.678133135028622	7.19980253299957	GCAATTAAAC
chr5	111721083	111721084	chr5:111721084:G:A	rs17842608	G	A	A	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr5	111727160	111727161	chr5:111727161:T:C	rs55689845	T	C	T	Hoxd9_MA0913.1	15	0	+	0	0	.
chr5	111774899	111774900	chr5:111774900:T:G	rs62371571	T	G	T	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr5	111865637	111865638	chr5:111865638:A:G	rs73787704	A	G	G	Hoxd9_MA0913.1	16	0	+	0	0	.
chr5	111942102	111942103	chr5:111942103:C:T	rs6882073	C	T	T	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr5	111949184	111949185	chr5:111949185:T:C	rs6862840	T	C	T	Hoxd9_MA0913.1	21	0	+	0	0	.
chr5	112012371	112012372	chr5:112012372:T:G	rs26542	T	G	T	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr5	112013622	112013623	chr5:112013623:T:C	rs26540	T	C	T	Hoxd9_MA0913.1	20	0	-	0	0	.
chr5	112138546	112138547	chr5:112138547:C:T	rs76177172	C	T	C	Hoxd9_MA0913.1	14	0	-	0	0	.
chr5	112307008	112307009	chr5:112307009:C:A	rs11743178	C	A	C	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr5	112681297	112681298	chr5:112681298:C:G	rs17285505	C	G	G	Hoxd9_MA0913.1	1	1	+	9.760171550280933	6.667606537996219	GCAATTAAAA
chr5	112803190	112803191	chr5:112803191:G:C	rs2952615	G	C	C	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr5	112849793	112849794	chr5:112849794:A:G	rs497844	A	G	A	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr5	112849815	112849816	chr5:112849816:A:C	rs566419	A	C	A	Hoxd9_MA0913.1	16	0	+	0	0	.
chr5	113089685	113089686	chr5:113089686:C:T	rs7714160	C	T	C	Hoxd9_MA0913.1	15	0	-	0	0	.
chr5	113246737	113246738	chr5:113246738:T:C	rs76425108	T	C	T	Hoxd9_MA0913.1	0	1	-	8.853608248980283	9.801341972390743	ACAATAAAAA
chr5	113246744	113246745	chr5:113246745:G:T	rs7724707	G	T	t	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr5	113257649	113257650	chr5:113257650:C:T	rs10519347	C	T	C	Hoxd9_MA0913.1	15	0	+	0	0	.
chr5	113266864	113266865	chr5:113266865:G:T	rs17135519	G	T	T	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr5	113401081	113401082	chr5:113401082:A:G	rs26961	A	G	G	Hoxd9_MA0913.1	20	0	+	0	0	.
chr5	113682479	113682480	chr5:113682480:T:C	rs890924	T	C	T	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr5	113795000	113795001	chr5:113795001:T:C	rs17135985	T	C	T	Hoxd9_MA0913.1	7	1	-	7.7976343601680895	0.9584898828137469	GCCATAAAAC
chr5	113800885	113800886	chr5:113800886:C:T	rs4705473	C	T	C	Hoxd9_MA0913.1	18	0	-	0	0	.
chr5	113806133	113806134	chr5:113806134:A:G	rs6881055	A	G	A	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr5	114412816	114412817	chr5:114412817:A:G	rs184692604	A	G	A	Hoxd9_MA0913.1	3	1	+	8.287725110553424	6.460106170058319	GTCATAAAAT
chr5	114416419	114416420	chr5:114416420:T:G	rs337714	T	G	G	Hoxd9_MA0913.1	9	1	-	8.531537147691377	7.449498732439066	GTCATAAAAA
chr5	115073057	115073058	chr5:115073058:T:C	rs6860306	T	C	T	Hoxd9_MA0913.1	18	0	-	0	0	.
chr5	115073075	115073076	chr5:115073076:C:A	rs6879401	C	A	A	Hoxd9_MA0913.1	0	1	-	9.453206344661718	6.416063648708848	GTAATAAAAA
chr5	115637152	115637153	chr5:115637153:A:C	rs256949	A	C	C	Hoxd9_MA0913.1	18	0	-	0	0	.
chr5	115773475	115773476	chr5:115773476:G:A	rs113375033	G	A	g	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr5	115917072	115917073	chr5:115917073:G:A	rs17138406	G	A	A	Hoxd9_MA0913.1	20	0	+	0	0	.
chr5	115966368	115966369	chr5:115966369:A:C	rs6896619	A	C	A	Hoxd9_MA0913.1	25	0	-	0	0	.
chr5	116030758	116030759	chr5:116030759:G:A	rs1113306	G	A	G	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr5	116118654	116118655	chr5:116118655:G:T	rs763557259	G	T	G	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr5	116130004	116130005	chr5:116130005:A:G	rs77268140	A	G	A	Hoxd9_MA0913.1	17	0	-	0	0	.
chr5	116137725	116137726	chr5:116137726:C:A	rs10519444	C	A	C	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr5	116137741	116137742	chr5:116137742:G:A	rs149509018	G	A	G	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr5	116292336	116292337	chr5:116292337:T:C	rs112917070	T	C	T	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr5	116423368	116423369	chr5:116423369:T:C	rs17139724	T	C	T	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr5	116423392	116423393	chr5:116423393:C:G	rs73268959	C	G	C	Hoxd9_MA0913.1	18	0	+	0	0	.
chr5	116443322	116443323	chr5:116443323:C:T	rs144876004	C	T	C	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr5	116498736	116498737	chr5:116498737:G:C	rs258015	G	C	G	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr5	117242034	117242035	chr5:117242035:C:T	rs10037418	C	T	C	Hoxd9_MA0913.1	11	0	-	0	0	.
chr5	117272482	117272483	chr5:117272483:A:G	rs6874362	A	G	A	Hoxd9_MA0913.1	20	0	-	0	0	.
chr5	117337597	117337598	chr5:117337598:T:C	rs4547957	T	C	T	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr5	117461517	117461518	chr5:117461518:T:C	rs112450477	T	C	T	Hoxd9_MA0913.1	26	0	+	0	0	.
chr5	117473240	117473241	chr5:117473241:G:A	rs62380101	G	A	G	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr5	117691176	117691177	chr5:117691177:C:A	rs1526882	C	A	C	Hoxd9_MA0913.1	10	0	+	0	0	.
chr5	118115932	118115933	chr5:118115933:G:A	rs4559034	G	A	G	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr5	118252653	118252654	chr5:118252654:C:T	rs66466949	C	T	T	Hoxd9_MA0913.1	10	0	+	0	0	.
chr5	118253519	118253520	chr5:118253520:A:G	rs73237722	A	G	A	Hoxd9_MA0913.1	11	0	-	0	0	.
chr5	118280088	118280089	chr5:118280089:T:A	chr5:118280089:T:A	T	A	T	Hoxd9_MA0913.1	19	0	-	0	0	.
chr5	118520649	118520650	chr5:118520650:T:C	rs4440399	T	C	C	Hoxd9_MA0913.1	14	0	-	0	0	.
chr5	118533969	118533970	chr5:118533970:A:C	rs10053323	A	C	A	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr5	118550203	118550204	chr5:118550204:A:C	rs7448528	A	C	A	Hoxd9_MA0913.1	12	0	-	0	0	.
chr5	118565388	118565389	chr5:118565389:T:A	rs6894514	T	A	A	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr5	118723030	118723031	chr5:118723031:T:G	rs730906	T	G	T	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr5	119328949	119328950	chr5:119328950:C:T	rs11959964	C	T	C	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr5	119388545	119388546	chr5:119388546:A:C	rs12514023	A	C	A	Hoxd9_MA0913.1	0	1	+	8.853608248980283	8.323343304007485	ACAATAAAAA
chr5	119869600	119869601	chr5:119869601:G:T	rs71586445	G	T	G	Hoxd9_MA0913.1	28	0	-	0	0	.
chr5	119919289	119919290	chr5:119919290:C:T	rs74804854	C	T	C	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr5	120270846	120270847	chr5:120270847:G:A	rs994998	G	A	A	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr5	120293577	120293578	chr5:120293578:G:C	rs4505982	G	C	G	Hoxd9_MA0913.1	28	0	+	0	0	.
chr5	120435257	120435258	chr5:120435258:A:G	rs72786214	A	G	A	Hoxd9_MA0913.1	21	0	+	0	0	.
chr5	121053290	121053291	chr5:121053291:T:C	rs7727775	T	C	T	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr5	121377674	121377675	chr5:121377675:G:A	rs700604	G	A	G	Hoxd9_MA0913.1	1	1	-	8.334848631621252	7.986713003892226	GCAATAAAAG
chr5	121706867	121706868	chr5:121706868:G:A	rs115298739	G	A	G	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr5	121757824	121757825	chr5:121757825:T:A	rs17148352	T	A	T	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr5	121974366	121974367	chr5:121974367:G:A	rs78815427	G	A	G	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr5	122183712	122183713	chr5:122183713:C:A	rs7725969	C	A	C	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr5	122420258	122420259	chr5:122420259:G:A	rs304388	G	A	G	Hoxd9_MA0913.1	11	0	-	0	0	.
chr5	122760020	122760021	chr5:122760021:C:T	rs116004400	C	T	C	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr5	123088006	123088007	chr5:123088007:T:C	rs730359	T	C	C	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr5	123178893	123178894	chr5:123178894:C:T	rs163186	C	T	C	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr5	123835955	123835956	chr5:123835956:T:C	rs62373066	T	C	T	Hoxd9_MA0913.1	18	0	+	0	0	.
chr5	124209805	124209806	chr5:124209806:G:A	rs12188854	G	A	G	Hoxd9_MA0913.1	12	0	+	0	0	.
chr5	124209818	124209819	chr5:124209819:A:G	rs7705579	A	G	G	Hoxd9_MA0913.1	25	0	+	0	0	.
chr5	124259449	124259450	chr5:124259450:A:G	rs79796659	A	G	A	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr5	124431129	124431130	chr5:124431130:G:T	rs588441	G	T	G	Hoxd9_MA0913.1	29	0	+	0	0	.
chr5	124527440	124527441	chr5:124527441:T:C	rs6870395	T	C	C	Hoxd9_MA0913.1	13	0	-	0	0	.
chr5	124527450	124527451	chr5:124527451:T:A	rs115653854	T	A	T	Hoxd9_MA0913.1	3	1	-	8.719303557138431	5.104963688009447	GCAATAAAAC
chr5	124538523	124538524	chr5:124538524:G:A	rs77818827	G	A	G	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr5	124551006	124551007	chr5:124551007:T:A	rs76928937	T	A	T	Hoxd9_MA0913.1	26	0	+	0	0	.
chr5	124592829	124592830	chr5:124592830:A:T	rs10463781	A	T	A	Hoxd9_MA0913.1	11	0	+	0	0	.
chr5	124750115	124750116	chr5:124750116:G:C	rs60615228	G	C	G	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr5	124754598	124754599	chr5:124754599:C:T	rs56011599	C	T	C	Hoxd9_MA0913.1	12	0	-	0	0	.
chr5	124839479	124839480	chr5:124839480:A:G	rs75439582	A	G	A	Hoxd9_MA0913.1	26	0	-	0	0	.
chr5	124839873	124839874	chr5:124839874:A:T	chr5:124839874:A:T	A	T	A	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr5	124867294	124867295	chr5:124867295:C:T	rs765889423	C	T	C	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr5	125012375	125012376	chr5:125012376:G:A	rs12516382	G	A	G	Hoxd9_MA0913.1	26	0	-	0	0	.
chr5	125012539	125012540	chr5:125012540:G:A	rs6865793	G	A	A	Hoxd9_MA0913.1	0	1	+	8.879672775420401	7.931939052009941	GCCATAAAAA
chr5	125153392	125153393	chr5:125153393:A:T	rs7708261	A	T	A	Hoxd9_MA0913.1	16	0	-	0	0	.
chr5	125198361	125198362	chr5:125198362:T:C	rs920386	T	C	T	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr5	125200085	125200086	chr5:125200086:A:C	rs17518473	A	C	A	Hoxd9_MA0913.1	22	0	-	0	0	.
chr5	125200124	125200125	chr5:125200125:C:T	rs72792627	C	T	C	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr5	125209838	125209839	chr5:125209839:A:G	rs1439570	A	G	A	Hoxd9_MA0913.1	3	1	+	8.719303557138431	6.891684616643326	GCAATAAAAC
chr5	125209854	125209855	chr5:125209855:T:A	rs1439569	T	A	T	Hoxd9_MA0913.1	19	0	+	0	0	.
chr5	125373377	125373378	chr5:125373378:A:G	rs62374698	A	G	A	Hoxd9_MA0913.1	15	0	-	0	0	.
chr5	125389857	125389858	chr5:125389858:T:C	rs72782955	T	C	T	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr5	125389859	125389860	chr5:125389860:C:G	rs72782957	C	G	C	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr5	125447235	125447236	chr5:125447236:A:G	rs4836192	A	G	G	Hoxd9_MA0913.1	22	0	-	0	0	.
chr5	125447254	125447255	chr5:125447255:T:C	rs1293116273	T	C	T	Hoxd9_MA0913.1	3	1	-	9.801341972390743	7.973723031895638	GCAATAAAAA
chr5	125485370	125485371	chr5:125485371:G:A	rs10076405	G	A	A	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr5	125700060	125700061	chr5:125700061:G:C	rs35380838	G	C	G	Hoxd9_MA0913.1	3	1	+	7.932552609785828	5.293940879880877	GCAGTTAAAA
chr5	125869812	125869813	chr5:125869813:A:G	rs141149677	A	G	A	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr5	126069692	126069693	chr5:126069693:A:G	rs1421872	A	G	A	Hoxd9_MA0913.1	15	0	+	0	0	.
chr5	126105209	126105210	chr5:126105210:C:G	rs1480962	C	G	G	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr5	126483291	126483292	chr5:126483292:A:C	rs79500684	A	C	A	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr5	126715188	126715189	chr5:126715189:C:G	rs13154662	C	G	c	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr5	126912761	126912762	chr5:126912762:T:G	rs140271859	T	G	T	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr5	126925593	126925594	chr5:126925594:A:C	rs55958512	A	C	A	Hoxd9_MA0913.1	7	1	+	9.760171550280933	6.466324798562502	GCAATTAAAA
chr5	127011851	127011852	chr5:127011852:G:A	rs9327428	G	A	G	Hoxd9_MA0913.1	0	1	-	8.282172881897674	6.723028854328064	CCAATTAAAA
chr5	127305603	127305604	chr5:127305604:G:A	rs2585194	G	A	G	Hoxd9_MA0913.1	0	1	+	8.838502353310592	7.890768629900132	GCCATTAAAA
chr5	127520196	127520197	chr5:127520197:A:T	rs31192	A	T	T	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr5	127909902	127909903	chr5:127909903:C:T	rs17839667	C	T	C	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr5	128002523	128002524	chr5:128002524:A:G	rs13169878	A	G	A	Hoxd9_MA0913.1	22	0	-	0	0	.
chr5	128478610	128478611	chr5:128478611:A:C	rs150418569	A	C	A	Hoxd9_MA0913.1	21	0	+	0	0	.
chr5	128935011	128935012	chr5:128935012:A:G	rs2577510	A	G	g	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr5	128935021	128935022	chr5:128935022:T:C	rs11952278	T	C	T	Hoxd9_MA0913.1	4	1	+	8.2283733949328	4.93623914315782	GCAATAAAGA
chr5	128950528	128950529	chr5:128950529:C:T	rs2526211	C	T	C	Hoxd9_MA0913.1	0	1	-	7.7976343601680895	6.84990063675763	GCCATAAAAC
chr5	129098459	129098460	chr5:129098460:G:A	rs3798110	G	A	G	Hoxd9_MA0913.1	13	0	-	0	0	.
chr5	129188270	129188271	chr5:129188271:G:A	rs74920455	G	A	G	Hoxd9_MA0913.1	14	0	-	0	0	.
chr5	129399602	129399603	chr5:129399603:T:A	rs72785091	T	A	T	Hoxd9_MA0913.1	2	1	-	8.812437826870472	2.3620937950196907	ACAATTAAAA
chr5	129448142	129448143	chr5:129448143:T:C	rs77308773	T	C	T	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr5	129508709	129508710	chr5:129508710:C:T	rs10071253	C	T	T	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr5	129603162	129603163	chr5:129603163:C:T	rs72790690	C	T	C	Hoxd9_MA0913.1	28	0	+	0	0	.
chr5	129931013	129931014	chr5:129931014:A:G	rs1022402940	A	G	A	Hoxd9_MA0913.1	1	1	-	9.209394307523764	9.55752993525279	GTAATAAAAT
chr5	130541778	130541779	chr5:130541779:G:A	rs10074110	G	A	G	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr5	130991432	130991433	chr5:130991433:C:A	rs6595973	C	A	A	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr5	131211534	131211535	chr5:131211535:T:C	rs72787016	T	C	T	Hoxd9_MA0913.1	8	1	-	8.853608248980283	7.280639671522341	ACAATAAAAA
chr5	131258005	131258006	chr5:131258006:T:G	rs144294599	T	G	T	Hoxd9_MA0913.1	16	0	-	0	0	.
chr5	131258029	131258030	chr5:131258030:G:C	rs7356708	G	C	C	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr5	131656738	131656739	chr5:131656739:T:C	rs31583	T	C	A	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr5	131751702	131751703	chr5:131751703:T:C	rs115921850	T	C	t	Hoxd9_MA0913.1	17	0	+	0	0	.
chr5	132150805	132150806	chr5:132150806:C:T	rs79155232	C	T	C	Hoxd9_MA0913.1	0	1	-	8.287725110553424	7.3399913871429625	GTCATAAAAT
chr5	132589588	132589589	chr5:132589589:T:A	rs114648433	T	A	T	Hoxd9_MA0913.1	21	0	+	0	0	.
chr5	132840284	132840285	chr5:132840285:T:G	chr5:132840285:T:G	T	G	T	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr5	133041420	133041421	chr5:133041421:G:A	rs11950367	G	A	G	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr5	133116848	133116849	chr5:133116849:G:A	rs68118619	G	A	g	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr5	133348965	133348966	chr5:133348966:A:T	rs17166625	A	T	A	Hoxd9_MA0913.1	9	1	+	8.282172881897674	8.03836084475972	CCAATTAAAA
chr5	133372597	133372598	chr5:133372598:G:C	rs28222	G	C	C	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr5	133433650	133433651	chr5:133433651:T:C	rs115958455	T	C	t	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr5	133635002	133635003	chr5:133635003:C:T	rs256207	C	T	C	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr5	133664607	133664608	chr5:133664608:C:T	rs10052270	C	T	C	Hoxd9_MA0913.1	0	1	-	8.287725110553424	7.3399913871429625	GTCATAAAAT
chr5	133664624	133664625	chr5:133664625:G:T	rs72789178	G	T	G	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr5	133993133	133993134	chr5:133993134:T:C	rs6893145	T	C	T	Hoxd9_MA0913.1	27	0	+	0	0	.
chr5	134537131	134537132	chr5:134537132:C:G	rs540680414	C	G	C	Hoxd9_MA0913.1	12	0	-	0	0	.
chr5	134545509	134545510	chr5:134545510:A:C	rs72798649	A	C	A	Hoxd9_MA0913.1	17	0	-	0	0	.
chr5	134594867	134594868	chr5:134594868:T:C	rs114128743	T	C	T	Hoxd9_MA0913.1	9	1	+	8.287725110553424	7.449498732439066	GTCATAAAAT
chr5	135133376	135133377	chr5:135133377:G:A	rs11954239	G	A	G	Hoxd9_MA0913.1	1	1	-	7.8800714937946905	7.531935866065666	GCGATAAAAT
chr5	135143883	135143884	chr5:135143884:C:T	rs7709326	C	T	T	Hoxd9_MA0913.1	21	0	-	0	0	.
chr5	135323379	135323380	chr5:135323380:C:A	chr5:135323380:C:A	C	A	C	Hoxd9_MA0913.1	10	0	+	0	0	.
chr5	135429502	135429503	chr5:135429503:G:T	rs138209082	G	T	G	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr5	135504171	135504172	chr5:135504172:G:A	rs11749616	G	A	T	Hoxd9_MA0913.1	10	0	+	0	0	.
chr5	135629049	135629050	chr5:135629050:C:T	rs113941996	C	T	C	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr5	135629061	135629062	chr5:135629062:A:C	chr5:135629062:A:C	A	C	A	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr5	135881694	135881695	chr5:135881695:C:T	rs1557918	C	T	T	Hoxd9_MA0913.1	22	0	-	0	0	.
chr5	135977343	135977344	chr5:135977344:C:T	rs2526152	C	T	T	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr5	136353542	136353543	chr5:136353543:T:C	rs3777154	T	C	T	Hoxd9_MA0913.1	19	0	-	0	0	.
chr5	136721956	136721957	chr5:136721957:T:C	rs12522541	T	C	T	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr5	137041009	137041010	chr5:137041010:A:G	rs6895118	A	G	A	Hoxd9_MA0913.1	15	0	-	0	0	.
chr5	137135526	137135527	chr5:137135527:G:A	rs11739884	G	A	g	Hoxd9_MA0913.1	20	0	+	0	0	.
chr5	137319579	137319580	chr5:137319580:T:G	rs192442398	T	G	G	Hoxd9_MA0913.1	23	0	+	0	0	.
chr5	137480161	137480162	chr5:137480162:T:C	rs13169950	T	C	T	Hoxd9_MA0913.1	5	1	+	9.760171550280933	6.3665402010213725	GCAATTAAAA
chr5	137619029	137619030	chr5:137619030:T:C	rs3813314	T	C	T	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr5	137734500	137734501	chr5:137734501:C:T	rs138568679	C	T	C	Hoxd9_MA0913.1	17	0	-	0	0	.
chr5	137796363	137796364	chr5:137796364:G:A	rs56265335	G	A	G	Hoxd9_MA0913.1	10	0	+	0	0	.
chr5	137944231	137944232	chr5:137944232:G:A	rs13359605	G	A	G	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr5	138754240	138754241	chr5:138754241:T:C	rs80209828	T	C	T	Hoxd9_MA0913.1	11	0	-	0	0	.
chr5	139576655	139576656	chr5:139576656:T:C	rs355162	T	C	C	Hoxd9_MA0913.1	29	0	-	0	0	.
chr5	140164976	140164977	chr5:140164977:G:A	rs156082	G	A	A	Hoxd9_MA0913.1	24	0	+	0	0	.
chr5	140245638	140245639	chr5:140245639:G:A	rs11558407	G	A	G	Hoxd9_MA0913.1	19	0	-	0	0	.
chr5	141003750	141003751	chr5:141003751:T:G	rs3822342	T	G	T	Hoxd9_MA0913.1	29	0	+	0	0	.
chr5	141387498	141387499	chr5:141387499:T:A	rs57697403	T	A	t	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr5	141642148	141642149	chr5:141642149:A:T	rs6580193	A	T	A	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr5	141642162	141642163	chr5:141642163:A:C	rs1337806185	A	C	A	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr5	141897770	141897771	chr5:141897771:G:T	rs73274326	G	T	T	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr5	142096602	142096603	chr5:142096603:T:C	rs2879271	T	C	T	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr5	142308939	142308940	chr5:142308940:T:C	rs7703928	T	C	T	Hoxd9_MA0913.1	18	0	+	0	0	.
chr5	142429157	142429158	chr5:142429158:G:A	rs530916591	G	A	G	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr5	142478245	142478246	chr5:142478246:A:T	rs17098713	A	T	T	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr5	142593783	142593784	chr5:142593784:C:G	rs33999	C	G	C	Hoxd9_MA0913.1	10	0	+	0	0	.
chr5	142719964	142719965	chr5:142719965:G:A	rs114551823	G	A	G	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr5	142931333	142931334	chr5:142931334:C:T	rs37185	C	T	T	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr5	143084580	143084581	chr5:143084581:G:A	rs3776323	G	A	G	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr5	143102549	143102550	chr5:143102550:T:C	rs3797076	T	C	T	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr5	143156991	143156992	chr5:143156992:A:G	rs853173	A	G	A	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr5	143447226	143447227	chr5:143447227:G:A	rs4128753	G	A	A	Hoxd9_MA0913.1	17	0	-	0	0	.
chr5	143447251	143447252	chr5:143447252:T:G	rs4295416	T	G	T	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr5	143543579	143543580	chr5:143543580:A:G	rs61640029	A	G	A	Hoxd9_MA0913.1	17	0	+	0	0	.
chr5	143755254	143755255	chr5:143755255:T:A	rs2546877	T	A	T	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr5	143806432	143806433	chr5:143806433:T:C	rs3996362	T	C	T	Hoxd9_MA0913.1	2	1	-	8.282172881897674	6.604714440439576	CCAATTAAAA
chr5	144028823	144028824	chr5:144028824:C:T	rs772285381	C	T	c	Hoxd9_MA0913.1	19	0	-	0	0	.
chr5	144028853	144028854	chr5:144028854:T:A	rs72652816	T	A	T	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr5	144028859	144028860	chr5:144028860:A:G	rs95053	A	G	A	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr5	145226793	145226794	chr5:145226794:T:C	rs959237	T	C	T	Hoxd9_MA0913.1	22	0	-	0	0	.
chr5	145433208	145433209	chr5:145433209:A:G	rs11949093	A	G	A	Hoxd9_MA0913.1	4	1	-	8.490366725581566	5.198232473806588	GTCATTAAAA
chr5	145636654	145636655	chr5:145636655:A:T	rs2195939	A	T	a	Hoxd9_MA0913.1	7	1	+	7.75646393805828	4.462617186339848	GCCATTAAAC
chr5	145661644	145661645	chr5:145661645:C:T	rs563903993	C	T	C	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr5	145678491	145678492	chr5:145678492:A:G	rs17479816	A	G	A	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr5	145830007	145830008	chr5:145830008:T:C	rs394386	T	C	T	Hoxd9_MA0913.1	28	0	-	0	0	.
chr5	145926224	145926225	chr5:145926225:G:A	rs73310116	G	A	G	Hoxd9_MA0913.1	28	0	-	0	0	.
chr5	146095020	146095021	chr5:146095021:G:A	rs67829086	G	A	G	Hoxd9_MA0913.1	10	0	+	0	0	.
chr5	146725324	146725325	chr5:146725325:G:A	rs114362206	G	A	G	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr5	146897347	146897348	chr5:146897348:T:C	rs2915839	T	C	A	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr5	146920490	146920491	chr5:146920491:C:A	rs17105709	C	A	C	Hoxd9_MA0913.1	15	0	+	0	0	.
chr5	147175085	147175086	chr5:147175086:G:A	rs30949	G	A	G	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr5	147392414	147392415	chr5:147392415:C:T	rs1049171	C	T	T	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr5	147544830	147544831	chr5:147544831:C:G	rs59481656	C	G	G	Hoxd9_MA0913.1	17	0	-	0	0	.
chr5	147544849	147544850	chr5:147544850:T:C	rs57435233	T	C	T	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr5	147713490	147713491	chr5:147713491:T:C	rs7701840	T	C	C	Hoxd9_MA0913.1	19	0	+	0	0	.
chr5	147804870	147804871	chr5:147804871:G:C	rs13180146	G	C	G	Hoxd9_MA0913.1	10	0	+	0	0	.
chr5	147813985	147813986	chr5:147813986:T:A	rs7704640	T	A	G	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr5	147904174	147904175	chr5:147904175:T:A	rs7715834	T	A	T	Hoxd9_MA0913.1	3	1	-	8.853608248980283	5.2392683798513	ACAATAAAAA
chr5	147904195	147904196	chr5:147904196:G:A	rs73263261	G	A	G	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr5	148471706	148471707	chr5:148471707:A:T	rs6887366	A	T	T	Hoxd9_MA0913.1	28	0	-	0	0	.
chr5	148491910	148491911	chr5:148491911:C:T	rs114575049	C	T	C	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr5	148491944	148491945	chr5:148491945:A:G	rs34070447	A	G	A	Hoxd9_MA0913.1	20	0	+	0	0	.
chr5	148632175	148632176	chr5:148632176:T:C	rs5028114	T	C	C	Hoxd9_MA0913.1	5	1	+	8.082713108822833	4.689081759563274	GCGATTAAAA
chr5	148864863	148864864	chr5:148864864:T:C	rs72829145	T	C	T	Hoxd9_MA0913.1	0	1	-	8.812437826870472	9.760171550280933	ACAATTAAAA
chr5	148955482	148955483	chr5:148955483:C:T	rs79080310	C	T	C	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr5	148965500	148965501	chr5:148965501:C:T	rs34916792	C	T	C	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr5	149127899	149127900	chr5:149127900:G:A	rs73795791	G	A	G	Hoxd9_MA0913.1	3	1	+	7.932552609785828	9.760171550280933	GCAGTTAAAA
chr5	149452762	149452763	chr5:149452763:T:C	rs4705073	T	C	T	Hoxd9_MA0913.1	4	1	+	8.282172881897674	4.9900386301226956	CCAATTAAAA
chr5	149489689	149489690	chr5:149489690:A:T	rs10045382	A	T	A	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr5	149835904	149835905	chr5:149835905:G:T	rs62382346	G	T	G	Hoxd9_MA0913.1	25	0	-	0	0	.
chr5	149956875	149956876	chr5:149956876:G:A	rs9324634	G	A	G	Hoxd9_MA0913.1	26	0	-	0	0	.
chr5	150216018	150216019	chr5:150216019:C:T	rs73796372	C	T	C	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr5	150320570	150320571	chr5:150320571:G:A	rs142894813	G	A	G	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr5	150339369	150339370	chr5:150339370:G:C	rs146659109	G	C	G	Hoxd9_MA0913.1	12	0	-	0	0	.
chr5	150389313	150389314	chr5:150389314:C:T	rs77558738	C	T	T	Hoxd9_MA0913.1	17	0	-	0	0	.
chr5	150567740	150567741	chr5:150567741:C:T	rs116802586	C	T	C	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr5	150656268	150656269	chr5:150656269:G:C	chr5:150656269:G:C	G	C	G	Hoxd9_MA0913.1	1	1	-	8.719303557138431	5.626738544853718	GCAATAAAAC
chr5	150789327	150789328	chr5:150789328:A:G	rs17111367	A	G	G	Hoxd9_MA0913.1	19	0	+	0	0	.
chr5	150961046	150961047	chr5:150961047:G:A	rs10476951	G	A	a	Hoxd9_MA0913.1	0	1	+	8.329997507299597	7.382263783889136	GTAATTAAAC
chr5	151018399	151018400	chr5:151018400:C:T	rs3763013	C	T	C	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr5	151054859	151054860	chr5:151054860:C:T	rs6895271	C	T	C	Hoxd9_MA0913.1	14	0	+	0	0	.
chr5	151054860	151054861	chr5:151054861:A:G	rs4958879	A	G	G	Hoxd9_MA0913.1	15	0	+	0	0	.
chr5	151080485	151080486	chr5:151080486:C:T	rs7719549	C	T	C	Hoxd9_MA0913.1	20	0	+	0	0	.
chr5	151087839	151087840	chr5:151087840:G:A	rs2233276	G	A	G	Hoxd9_MA0913.1	19	0	+	0	0	.
chr5	151202932	151202933	chr5:151202933:A:G	rs34182166	A	G	A	Hoxd9_MA0913.1	15	0	+	0	0	.
chr5	151313898	151313899	chr5:151313899:T:G	rs399214	T	G	G	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr5	151456583	151456584	chr5:151456584:A:G	rs11954054	A	G	A	Hoxd9_MA0913.1	4	1	-	8.678133135028622	5.385998883253641	GCAATTAAAC
chr5	151475319	151475320	chr5:151475320:C:T	rs165351	C	T	T	Hoxd9_MA0913.1	28	0	-	0	0	.
chr5	151483022	151483023	chr5:151483023:C:T	rs752519867	C	T	C	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr5	151949084	151949085	chr5:151949085:C:T	rs302392	C	T	C	Hoxd9_MA0913.1	22	0	-	0	0	.
chr5	152220522	152220523	chr5:152220523:T:C	rs76196342	T	C	C	Hoxd9_MA0913.1	25	0	+	0	0	.
chr5	152405750	152405751	chr5:152405751:G:A	rs4958537	G	A	A	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr5	152688774	152688775	chr5:152688775:A:G	rs149586080	A	G	A	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr5	153312268	153312269	chr5:153312269:A:T	rs72799219	A	T	A	Hoxd9_MA0913.1	14	0	+	0	0	.
chr5	153599274	153599275	chr5:153599275:T:G	rs116571489	T	G	T	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr5	153599279	153599280	chr5:153599280:T:C	rs66731359	T	C	T	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr5	153823321	153823322	chr5:153823322:G:A	rs2964011	G	A	A	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr5	154001719	154001720	chr5:154001720:A:G	rs9324762	A	G	G	Hoxd9_MA0913.1	6	1	+	9.55752993525279	2.742109267473449	GCAATAAAAT
chr5	154112849	154112850	chr5:154112850:G:A	rs190283842	G	A	G	Hoxd9_MA0913.1	23	0	+	0	0	.
chr5	154160351	154160352	chr5:154160352:G:A	rs55776503	G	A	g	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr5	154222291	154222292	chr5:154222292:G:A	rs78053153	G	A	G	Hoxd9_MA0913.1	24	0	-	0	0	.
chr5	154309890	154309891	chr5:154309891:G:C	rs17629424	G	C	G	Hoxd9_MA0913.1	12	0	-	0	0	.
chr5	154367017	154367018	chr5:154367018:A:G	rs75720702	A	G	A	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr5	154632004	154632005	chr5:154632005:A:G	rs72797540	A	G	A	Hoxd9_MA0913.1	25	0	+	0	0	.
chr5	154758844	154758845	chr5:154758845:A:T	rs58415346	A	T	T	Hoxd9_MA0913.1	28	0	+	0	0	.
chr5	154842996	154842997	chr5:154842997:C:G	rs2544860	C	G	G	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr5	155021972	155021973	chr5:155021973:A:G	rs74854623	A	G	A	Hoxd9_MA0913.1	9	1	+	8.490366725581566	7.023873384812075	GTCATTAAAA
chr5	155089111	155089112	chr5:155089112:T:C	rs66691937	T	C	t	Hoxd9_MA0913.1	14	0	+	0	0	.
chr5	155540989	155540990	chr5:155540990:C:T	rs1363738	C	T	T	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr5	156220227	156220228	chr5:156220228:C:A	rs17053349	C	A	C	Hoxd9_MA0913.1	11	0	-	0	0	.
chr5	156421774	156421775	chr5:156421775:C:T	rs12163943	C	T	C	Hoxd9_MA0913.1	19	0	-	0	0	.
chr5	157100574	157100575	chr5:157100575:C:T	rs143079649	C	T	c	Hoxd9_MA0913.1	26	0	-	0	0	.
chr5	157151214	157151215	chr5:157151215:G:A	rs7733396	G	A	G	Hoxd9_MA0913.1	21	0	-	0	0	.
chr5	157152439	157152440	chr5:157152440:A:G	rs365782	A	G	G	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr5	157309301	157309302	chr5:157309302:C:T	rs392512	C	T	c	Hoxd9_MA0913.1	12	0	-	0	0	.
chr5	158020740	158020741	chr5:158020741:C:T	rs7717217	C	T	T	Hoxd9_MA0913.1	3	1	-	7.973723031895638	9.801341972390743	GCAGTAAAAA
chr5	158020763	158020764	chr5:158020764:C:G	rs7717235	C	G	G	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr5	158197777	158197778	chr5:158197778:G:A	rs190272546	G	A	G	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr5	158355314	158355315	chr5:158355315:A:T	rs117103926	A	T	A	Hoxd9_MA0913.1	26	0	-	0	0	.
chr5	158408584	158408585	chr5:158408585:C:T	rs56068097	C	T	C	Hoxd9_MA0913.1	27	0	-	0	0	.
chr5	158450333	158450334	chr5:158450334:A:G	chr5:158450334:A:G	A	G	A	Hoxd9_MA0913.1	6	1	+	8.678133135028622	1.8627124672492799	GCAATTAAAC
chr5	158815964	158815965	chr5:158815965:G:C	rs115855109	G	C	T	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr5	159090224	159090225	chr5:159090225:T:G	rs13168903	T	G	G	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr5	159533577	159533578	chr5:159533578:C:T	rs78712100	C	T	C	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr5	159645443	159645444	chr5:159645444:T:C	rs10515793	T	C	T	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr5	160083432	160083433	chr5:160083433:T:C	rs115577968	T	C	T	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr5	160213644	160213645	chr5:160213645:G:A	rs6556482	G	A	A	Hoxd9_MA0913.1	22	0	+	0	0	.
chr5	160743137	160743138	chr5:160743138:T:C	rs1432787	T	C	T	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr5	160750483	160750484	chr5:160750484:G:T	rs2963193	G	T	G	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr5	160843351	160843352	chr5:160843352:C:T	rs73305852	C	T	C	Hoxd9_MA0913.1	0	1	-	7.943390935685037	6.995657212274576	GCAATTAAGT
chr5	160962159	160962160	chr5:160962160:C:A	rs11750052	C	A	C	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr5	161234976	161234977	chr5:161234977:A:G	rs72809500	A	G	A	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr5	161372782	161372783	chr5:161372783:T:C	rs76805041	T	C	T	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr5	161410724	161410725	chr5:161410725:A:G	rs17059436	A	G	A	Hoxd9_MA0913.1	15	0	-	0	0	.
chr5	161900653	161900654	chr5:161900654:T:C	rs10476367	T	C	T	Hoxd9_MA0913.1	4	1	+	8.812437826870472	5.520303575095493	ACAATTAAAA
chr5	162514318	162514319	chr5:162514319:T:C	rs12109415	T	C	T	Hoxd9_MA0913.1	18	0	-	0	0	.
chr5	162715685	162715686	chr5:162715686:T:G	rs10067000	T	G	T	Hoxd9_MA0913.1	2	1	-	7.932552609785828	7.010883412815486	GCAGTTAAAA
chr5	162786239	162786240	chr5:162786240:G:A	rs62398131	G	A	G	Hoxd9_MA0913.1	0	1	+	8.187202972822991	7.2394692494125295	GCAATTAAGA
chr5	162786258	162786259	chr5:162786259:G:A	rs79478433	G	A	A	Hoxd9_MA0913.1	19	0	+	0	0	.
chr5	163346541	163346542	chr5:163346542:A:G	rs1421840	A	G	A	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr5	163489406	163489407	chr5:163489407:C:T	rs11748030	C	T	C	Hoxd9_MA0913.1	12	0	-	0	0	.
chr5	163489421	163489422	chr5:163489422:A:G	rs299316	A	G	A	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr5	163846624	163846625	chr5:163846625:A:G	rs6881878	A	G	A	Hoxd9_MA0913.1	17	0	-	0	0	.
chr5	164175140	164175141	chr5:164175141:G:A	rs1422767	G	A	A	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr5	164353339	164353340	chr5:164353340:G:C	chr5:164353340:G:C	G	C	G	Hoxd9_MA0913.1	19	0	-	0	0	.
chr5	164371185	164371186	chr5:164371186:T:A	rs950390540	T	A	T	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr5	164799291	164799292	chr5:164799292:A:G	rs2963125	A	G	A	Hoxd9_MA0913.1	29	0	+	0	0	.
chr5	164880346	164880347	chr5:164880347:G:A	rs11746351	G	A	A	Hoxd9_MA0913.1	18	0	+	0	0	.
chr5	165016019	165016020	chr5:165016020:G:C	rs4547946	G	C	G	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr5	165681192	165681193	chr5:165681193:A:G	rs61682315	A	G	G	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr5	165681205	165681206	chr5:165681206:A:C	rs58657048	A	C	C	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr5	165800080	165800081	chr5:165800081:C:G	rs138489167	C	G	C	Hoxd9_MA0913.1	10	0	+	0	0	.
chr5	166071868	166071869	chr5:166071869:C:T	rs31767	C	T	T	Hoxd9_MA0913.1	0	1	-	9.412035922551908	8.464302199141448	GTAATTAAAA
chr5	166488468	166488469	chr5:166488469:G:A	rs17067006	G	A	G	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr5	166535856	166535857	chr5:166535857:G:T	rs6555698	G	T	T	Hoxd9_MA0913.1	17	0	+	0	0	.
chr5	166773375	166773376	chr5:166773376:G:A	rs75354024	G	A	G	Hoxd9_MA0913.1	0	1	+	9.168223885413955	8.220490162003495	GTAATTAAAT
chr5	166786903	166786904	chr5:166786904:T:C	rs143396374	T	C	T	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr5	167008475	167008476	chr5:167008476:G:A	rs1501802	G	A	G	Hoxd9_MA0913.1	19	0	-	0	0	.
chr5	167032258	167032259	chr5:167032259:A:G	rs1566632	A	G	A	Hoxd9_MA0913.1	25	0	+	0	0	.
chr5	167222024	167222025	chr5:167222025:A:G	rs17068085	A	G	G	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr5	167429267	167429268	chr5:167429268:C:T	rs7701318	C	T	C	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr5	167610928	167610929	chr5:167610929:G:A	rs11134465	G	A	A	Hoxd9_MA0913.1	14	0	-	0	0	.
chr5	167623567	167623568	chr5:167623568:T:C	rs962065	T	C	C	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr5	167643154	167643155	chr5:167643155:G:C	rs7443768	G	C	C	Hoxd9_MA0913.1	26	0	+	0	0	.
chr5	167943924	167943925	chr5:167943925:C:T	rs32414	C	T	C	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr5	167964876	167964877	chr5:167964877:A:T	rs2337032	A	T	A	Hoxd9_MA0913.1	2	1	+	8.812437826870472	2.3620937950196907	ACAATTAAAA
chr5	168055269	168055270	chr5:168055270:A:G	rs76435563	A	G	A	Hoxd9_MA0913.1	21	0	-	0	0	.
chr5	168055299	168055300	chr5:168055300:A:G	rs3860783	A	G	A	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr5	168367123	168367124	chr5:168367124:A:G	rs17632921	A	G	A	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr5	168449220	168449221	chr5:168449221:A:C	rs6894023	A	C	A	Hoxd9_MA0913.1	2	1	+	8.812437826870472	7.890768629900132	ACAATTAAAA
chr5	168476954	168476955	chr5:168476955:G:C	rs10063575	G	C	C	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr5	168754283	168754284	chr5:168754284:G:A	rs870724	G	A	A	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr5	168765788	168765789	chr5:168765789:C:T	rs1480523373	C	T	C	Hoxd9_MA0913.1	17	0	+	0	0	.
chr5	168953567	168953568	chr5:168953568:T:C	rs10066495	T	C	T	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr5	169013496	169013497	chr5:169013497:T:C	rs17734379	T	C	T	Hoxd9_MA0913.1	21	0	+	0	0	.
chr5	169085368	169085369	chr5:169085369:G:A	rs296011	G	A	A	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr5	169148535	169148536	chr5:169148536:T:C	rs78290078	T	C	T	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr5	169296671	169296672	chr5:169296672:G:A	rs73321509	G	A	G	Hoxd9_MA0913.1	17	0	-	0	0	.
chr5	169296699	169296700	chr5:169296700:C:T	rs892991875	C	T	C	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr5	169351710	169351711	chr5:169351711:G:A	rs114062667	G	A	G	Hoxd9_MA0913.1	19	0	+	0	0	.
chr5	169467107	169467108	chr5:169467108:C:T	rs7727768	C	T	T	Hoxd9_MA0913.1	10	0	-	0	0	.
chr5	170116624	170116625	chr5:170116625:T:G	rs12656959	T	G	T	Hoxd9_MA0913.1	4	1	+	8.853608248980283	5.561473997205303	ACAATAAAAA
chr5	170467023	170467024	chr5:170467024:G:A	chr5:170467024:G:A	G	A	G	Hoxd9_MA0913.1	11	0	+	0	0	.
chr5	170467023	170467024	chr5:170467024:G:C	rs116519689	G	C	G	Hoxd9_MA0913.1	11	0	+	0	0	.
chr5	170479911	170479912	chr5:170479912:A:G	rs35961900	A	G	A	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr5	170628607	170628608	chr5:170628608:C:T	rs9791084	C	T	C	Hoxd9_MA0913.1	29	0	+	0	0	.
chr5	170655808	170655809	chr5:170655809:G:C	rs10065965	G	C	G	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr5	170971560	170971561	chr5:170971561:T:G	rs145394826	T	G	T	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr5	171324507	171324508	chr5:171324508:T:G	rs112311001	T	G	T	Hoxd9_MA0913.1	23	0	+	0	0	.
chr5	171634822	171634823	chr5:171634823:T:C	rs171785	T	C	C	Hoxd9_MA0913.1	5	1	-	9.453206344661718	3.2315431917658497	GTAATAAAAA
chr5	171761173	171761174	chr5:171761174:G:A	rs4868120	G	A	A	Hoxd9_MA0913.1	9	1	-	7.7976343601680895	8.635860738282448	GCCATAAAAC
chr5	172181364	172181365	chr5:172181365:G:A	rs10044273	G	A	A	Hoxd9_MA0913.1	11	0	-	0	0	.
chr5	172380372	172380373	chr5:172380373:C:T	rs2879468	C	T	T	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr5	172407960	172407961	chr5:172407961:C:T	rs74935408	C	T	C	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr5	172554104	172554105	chr5:172554105:C:T	rs1433018	C	T	C	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr5	172591729	172591730	chr5:172591730:G:A	rs61193324	G	A	G	Hoxd9_MA0913.1	23	0	+	0	0	.
chr5	172603590	172603591	chr5:172603591:G:A	rs142148198	G	A	G	Hoxd9_MA0913.1	20	0	+	0	0	.
chr5	172863824	172863825	chr5:172863825:G:A	rs55955904	G	A	A	Hoxd9_MA0913.1	17	0	-	0	0	.
chr5	172955447	172955448	chr5:172955448:T:C	rs80148566	T	C	T	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr5	173568033	173568034	chr5:173568034:A:G	rs12523036	A	G	A	Hoxd9_MA0913.1	13	0	-	0	0	.
chr5	173793434	173793435	chr5:173793435:A:C	rs55799468	A	C	A	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr5	173817397	173817398	chr5:173817398:T:A	rs2546764	T	A	A	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr5	173832642	173832643	chr5:173832643:G:A	rs11740847	G	A	G	Hoxd9_MA0913.1	13	0	+	0	0	.
chr5	173850206	173850207	chr5:173850207:T:C	rs10078660	T	C	t	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr5	173886449	173886450	chr5:173886450:C:G	rs359461	C	G	G	Hoxd9_MA0913.1	15	0	+	0	0	.
chr5	173889725	173889726	chr5:173889726:G:A	rs359467	G	A	A	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr5	173921152	173921153	chr5:173921153:G:A	rs10516107	G	A	G	Hoxd9_MA0913.1	23	0	+	0	0	.
chr5	173954269	173954270	chr5:173954270:A:T	rs186182002	A	T	A	Hoxd9_MA0913.1	11	0	+	0	0	.
chr5	174245872	174245873	chr5:174245873:G:T	rs4868366	G	T	G	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr5	174518462	174518463	chr5:174518463:A:G	rs10475601	A	G	A	Hoxd9_MA0913.1	18	0	-	0	0	.
chr5	174878280	174878281	chr5:174878281:G:T	rs7448819	G	T	G	Hoxd9_MA0913.1	11	0	-	0	0	.
chr5	175046827	175046828	chr5:175046828:G:A	rs61491263	G	A	G	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr5	175480941	175480942	chr5:175480942:A:G	rs2940478	A	G	A	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr5	175507552	175507553	chr5:175507553:T:G	rs2471018	T	G	T	Hoxd9_MA0913.1	24	0	-	0	0	.
chr5	175507585	175507586	chr5:175507586:A:T	rs2261676	A	T	A	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr5	175507593	175507594	chr5:175507594:T:G	rs2453748	T	G	G	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr5	175747007	175747008	chr5:175747008:T:C	rs970282	T	C	C	Hoxd9_MA0913.1	28	0	+	0	0	.
chr5	175823764	175823765	chr5:175823765:T:C	rs78010558	T	C	T	Hoxd9_MA0913.1	3	1	-	8.635860738282448	6.8082417977873435	GCCATAAAAT
chr5	176466061	176466062	chr5:176466062:G:A	rs2033198	G	A	A	Hoxd9_MA0913.1	9	1	-	8.371167929409406	9.209394307523764	GTAATAAAAC
chr5	176473728	176473729	chr5:176473729:G:A	rs114032953	G	A	G	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr5	176503883	176503884	chr5:176503884:G:C	rs74292759	G	C	G	Hoxd9_MA0913.1	19	0	+	0	0	.
chr5	176547751	176547752	chr5:176547752:A:G	rs10059406	A	G	A	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr5	176652313	176652314	chr5:176652314:C:T	rs77425751	C	T	C	Hoxd9_MA0913.1	24	0	-	0	0	.
chr5	177007029	177007030	chr5:177007030:G:T	rs73343910	G	T	G	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr5	177137187	177137188	chr5:177137188:G:A	rs1052432	G	A	A	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr5	177142186	177142187	chr5:177142187:T:C	rs9885210	T	C	C	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr5	177363696	177363697	chr5:177363697:G:T	rs149930233	G	T	G	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr5	177421402	177421403	chr5:177421403:G:A	rs60971332	G	A	A	Hoxd9_MA0913.1	18	0	-	0	0	.
chr5	178288979	178288980	chr5:178288980:G:C	rs2913830	G	C	A	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr5	178368814	178368815	chr5:178368815:T:G	rs17580670	T	G	t	Hoxd9_MA0913.1	2	1	-	8.853608248980283	7.931939052009941	ACAATAAAAA
chr5	178393541	178393542	chr5:178393542:T:C	rs2910127	T	C	C	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr5	178538694	178538695	chr5:178538695:A:G	rs688074	A	G	A	Hoxd9_MA0913.1	17	0	+	0	0	.
chr5	178767294	178767295	chr5:178767295:T:A	rs60234391	T	A	t	Hoxd9_MA0913.1	27	0	-	0	0	.
chr5	178767324	178767325	chr5:178767325:C:T	rs34080101	C	T	N	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr5	179218636	179218637	chr5:179218637:G:A	rs55885988	G	A	G	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr5	179371337	179371338	chr5:179371338:T:A	rs74906923	T	A	T	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr5	179401645	179401646	chr5:179401646:T:C	rs517180	T	C	C	Hoxd9_MA0913.1	16	0	+	0	0	.
chr5	179406917	179406918	chr5:179406918:C:T	rs17671798	C	T	C	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr5	179406948	179406949	chr5:179406949:C:T	rs539251736	C	T	C	Hoxd9_MA0913.1	19	0	+	0	0	.
chr5	179515812	179515813	chr5:179515813:A:C	rs141979545	A	C	c	Hoxd9_MA0913.1	24	0	+	0	0	.
chr5	179544576	179544577	chr5:179544577:A:T	rs76749604	A	T	a	Hoxd9_MA0913.1	6	1	+	8.282172881897674	5.858852934363689	CCAATTAAAA
chr5	179759316	179759317	chr5:179759317:C:T	rs34646062	C	T	C	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr5	180184286	180184287	chr5:180184287:G:A	rs9329099	G	A	g	Hoxd9_MA0913.1	16	0	+	0	0	.
chr5	180290642	180290643	chr5:180290643:T:A	rs12658400	T	A	T	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr5	180317454	180317455	chr5:180317455:T:C	rs76812224	T	C	T	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr5	180317487	180317488	chr5:180317488:A:G	rs7719192	A	G	-	Hoxd9_MA0913.1	28	0	+	0	0	.
chr5	180794203	180794204	chr5:180794204:C:T	rs10903269	C	T	C	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr5	181206513	181206514	chr5:181206514:C:T	rs2770949	C	T	C	Hoxd9_MA0913.1	12	0	-	0	0	.
chr5	181218548	181218549	chr5:181218549:G:C	rs116408540	G	C	G	Hoxd9_MA0913.1	20	0	+	0	0	.
chr6	149608	149609	chr6:149609:G:A	rs7754266	G	A	.	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr6	260150	260151	chr6:260151:T:C	rs9503084	T	C	T	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr6	333344	333345	chr6:333345:A:G	rs372202849	A	G	G	Hoxd9_MA0913.1	3	1	+	7.984561357794846	6.156942417299742	GCAATAAAGT
chr6	389629	389630	chr6:389630:G:A	rs1514346	G	A	A	Hoxd9_MA0913.1	29	0	-	0	0	.
chr6	454458	454459	chr6:454459:G:A	rs115082386	G	A	G	Hoxd9_MA0913.1	11	0	-	0	0	.
chr6	740914	740915	chr6:740915:C:A	rs2788233	C	A	A	Hoxd9_MA0913.1	13	0	-	0	0	.
chr6	812135	812136	chr6:812136:A:G	rs9505233	A	G	A	Hoxd9_MA0913.1	24	0	-	0	0	.
chr6	893180	893181	chr6:893181:T:C	rs2784962	T	C	C	Hoxd9_MA0913.1	29	0	-	0	0	.
chr6	893219	893220	chr6:893220:G:C	rs2756317	G	C	C	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr6	1038079	1038080	chr6:1038080:A:T	rs2317451	A	T	t	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr6	1079904	1079905	chr6:1079905:G:A	rs7763673	G	A	G	Hoxd9_MA0913.1	11	0	+	0	0	.
chr6	1123146	1123147	chr6:1123147:T:C	rs7754106	T	C	C	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr6	1351692	1351693	chr6:1351693:A:G	rs938721	A	G	A	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr6	1364837	1364838	chr6:1364838:T:G	rs78581380	T	G	T	Hoxd9_MA0913.1	11	0	-	0	0	.
chr6	1414348	1414349	chr6:1414349:C:T	rs1711957	C	T	T	Hoxd9_MA0913.1	1	1	+	8.838502353310592	8.490366725581566	GCCATTAAAA
chr6	1443738	1443739	chr6:1443739:T:C	rs35969905	T	C	C	Hoxd9_MA0913.1	4	1	+	8.853608248980283	5.561473997205303	ACAATAAAAA
chr6	1612211	1612212	chr6:1612212:C:A	rs116336796	C	A	A	Hoxd9_MA0913.1	14	0	+	0	0	.
chr6	1833443	1833444	chr6:1833444:G:A	rs9503027	G	A	A	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr6	1916691	1916692	chr6:1916692:C:T	rs150497367	C	T	C	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr6	2101678	2101679	chr6:2101679:G:A	rs9392366	G	A	A	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr6	2450556	2450557	chr6:2450557:G:C	rs186790710	G	C	G	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr6	2562666	2562667	chr6:2562667:T:C	rs1254729	T	C	C	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr6	2605796	2605797	chr6:2605797:C:T	rs115907173	C	T	C	Hoxd9_MA0913.1	15	0	+	0	0	.
chr6	2807734	2807735	chr6:2807735:T:C	rs1381325	T	C	T	Hoxd9_MA0913.1	26	0	+	0	0	.
chr6	3157119	3157120	chr6:3157120:C:G	rs909961	C	G	c	Hoxd9_MA0913.1	18	0	+	0	0	.
chr6	3157124	3157125	chr6:3157125:G:A	rs567419705	G	A	G	Hoxd9_MA0913.1	23	0	+	0	0	.
chr6	3293319	3293320	chr6:3293320:A:G	rs7748151	A	G	A	Hoxd9_MA0913.1	14	0	+	0	0	.
chr6	3293328	3293329	chr6:3293329:G:A	rs190526671	G	A	G	Hoxd9_MA0913.1	23	0	+	0	0	.
chr6	3308229	3308230	chr6:3308230:C:T	rs58488740	C	T	C	Hoxd9_MA0913.1	29	0	+	0	0	.
chr6	3310640	3310641	chr6:3310641:T:A	rs72839385	T	A	T	Hoxd9_MA0913.1	4	1	+	9.412035922551908	6.724784498365752	GTAATTAAAA
chr6	3320500	3320501	chr6:3320501:G:A	chr6:3320501:G:A	G	A	G	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr6	3335048	3335049	chr6:3335049:G:A	rs9501991	G	A	g	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr6	3484899	3484900	chr6:3484900:T:C	rs1205032	T	C	C	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr6	3501070	3501071	chr6:3501071:A:C	rs4959845	A	C	A	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr6	4003129	4003130	chr6:4003130:T:C	rs1886334	T	C	C	Hoxd9_MA0913.1	26	0	+	0	0	.
chr6	4071599	4071600	chr6:4071600:T:C	rs942475	T	C	C	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr6	4473337	4473338	chr6:4473338:T:C	rs1265266	T	C	T	Hoxd9_MA0913.1	3	1	-	8.853608248980283	7.025989308485178	ACAATAAAAA
chr6	4662068	4662069	chr6:4662069:T:C	rs6923076	T	C	T	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr6	4715647	4715648	chr6:4715648:A:G	rs3812183	A	G	A	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr6	4715659	4715660	chr6:4715660:T:G	rs3812182	T	G	G	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr6	4715781	4715782	chr6:4715782:A:G	rs3812179	A	G	G	Hoxd9_MA0913.1	1	1	-	8.287725110553424	8.635860738282448	GTCATAAAAT
chr6	4715802	4715803	chr6:4715803:T:C	rs3812178	T	C	C	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr6	4756579	4756580	chr6:4756580:A:C	rs4053259	A	C	G	Hoxd9_MA0913.1	21	0	+	0	0	.
chr6	4909438	4909439	chr6:4909439:C:T	rs9405784	C	T	C	Hoxd9_MA0913.1	12	0	-	0	0	.
chr6	4928152	4928153	chr6:4928153:A:G	rs1112267	A	G	G	Hoxd9_MA0913.1	13	0	-	0	0	.
chr6	5389184	5389185	chr6:5389185:G:A	rs2503811	G	A	A	Hoxd9_MA0913.1	1	1	-	8.635860738282448	8.287725110553424	GCCATAAAAT
chr6	5482099	5482100	chr6:5482100:G:A	rs2552291	G	A	A	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr6	5752281	5752282	chr6:5752282:G:A	rs115995975	G	A	G	Hoxd9_MA0913.1	20	0	-	0	0	.
chr6	5987416	5987417	chr6:5987417:G:A	rs6913551	G	A	G	Hoxd9_MA0913.1	29	0	+	0	0	.
chr6	6226150	6226151	chr6:6226151:C:T	rs1742926	C	T	C	Hoxd9_MA0913.1	19	0	-	0	0	.
chr6	6332850	6332851	chr6:6332851:T:G	rs12204494	T	G	T	Hoxd9_MA0913.1	4	1	+	8.879672775420401	5.5875385236454225	GCCATAAAAA
chr6	6434377	6434378	chr6:6434378:T:A	rs75140244	T	A	T	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr6	6460681	6460682	chr6:6460682:C:T	rs9405930	C	T	C	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr6	6588698	6588699	chr6:6588699:G:A	rs201153136	G	A	G	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr6	6703802	6703803	chr6:6703803:T:C	rs73718632	T	C	T	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr6	6837487	6837488	chr6:6837488:G:C	rs17142614	G	C	G	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr6	6849062	6849063	chr6:6849063:G:C	rs1286020	G	C	C	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr6	6942934	6942935	chr6:6942935:T:C	rs2802436	T	C	T	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr6	7050838	7050839	chr6:7050839:G:A	rs72814928	G	A	G	Hoxd9_MA0913.1	28	0	+	0	0	.
chr6	7475786	7475787	chr6:7475787:G:T	rs2806193	G	T	g	Hoxd9_MA0913.1	21	0	+	0	0	.
chr6	7532415	7532416	chr6:7532416:C:T	rs1005396860	C	T	C	Hoxd9_MA0913.1	19	0	+	0	0	.
chr6	7729380	7729381	chr6:7729381:C:T	rs270417	C	T	T	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr6	8103043	8103044	chr6:8103044:G:C	rs115724264	G	C	G	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr6	8270190	8270191	chr6:8270191:A:T	rs636401	A	T	A	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr6	8499674	8499675	chr6:8499675:C:G	rs148596699	C	G	C	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr6	8536199	8536200	chr6:8536200:A:C	rs1796689	A	C	A	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr6	9064178	9064179	chr6:9064179:G:A	rs73407942	G	A	G	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr6	9172270	9172271	chr6:9172271:T:A	rs144443028	T	A	C	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr6	9456216	9456217	chr6:9456217:C:G	rs112741188	C	G	C	Hoxd9_MA0913.1	19	0	-	0	0	.
chr6	9500035	9500036	chr6:9500036:C:T	rs7765744	C	T	C	Hoxd9_MA0913.1	27	0	+	0	0	.
chr6	9831481	9831482	chr6:9831482:C:T	rs1206965	C	T	T	Hoxd9_MA0913.1	17	0	+	0	0	.
chr6	9841981	9841982	chr6:9841982:T:C	rs707781	T	C	T	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr6	10193244	10193245	chr6:10193245:G:A	rs56111005	G	A	G	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr6	10276215	10276216	chr6:10276216:T:C	rs9465760	T	C	T	Hoxd9_MA0913.1	11	0	+	0	0	.
chr6	10310399	10310400	chr6:10310400:G:A	rs12191256	G	A	G	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr6	10374080	10374081	chr6:10374081:G:A	rs16893301	G	A	G	Hoxd9_MA0913.1	2	1	+	8.123883530932645	9.801341972390743	GCGATAAAAA
chr6	10418336	10418337	chr6:10418337:A:T	rs17635655	A	T	A	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr6	10542495	10542496	chr6:10542496:A:G	rs9393370	A	G	A	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr6	10587602	10587603	chr6:10587603:A:G	rs75208823	A	G	A	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr6	11231890	11231891	chr6:11231891:C:T	rs78787402	C	T	C	Hoxd9_MA0913.1	0	1	+	8.323343304007485	6.764199276437873	CCAATAAAAA
chr6	11307532	11307533	chr6:11307533:A:G	rs80014145	A	G	A	Hoxd9_MA0913.1	20	0	-	0	0	.
chr6	11349103	11349104	chr6:11349104:G:A	rs141955082	G	A	G	Hoxd9_MA0913.1	15	0	+	0	0	.
chr6	11413854	11413855	chr6:11413855:A:G	rs9366787	A	G	A	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr6	11625693	11625694	chr6:11625694:A:G	rs715793	A	G	G	Hoxd9_MA0913.1	3	1	+	9.453206344661718	7.625587404166614	GTAATAAAAA
chr6	11641236	11641237	chr6:11641237:G:A	rs1150573	G	A	A	Hoxd9_MA0913.1	15	0	+	0	0	.
chr6	11809977	11809978	chr6:11809978:A:G	rs34927257	A	G	A	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr6	11870092	11870093	chr6:11870093:G:A	rs114892515	G	A	G	Hoxd9_MA0913.1	14	0	+	0	0	.
chr6	11971321	11971322	chr6:11971322:G:A	rs12213771	G	A	G	Hoxd9_MA0913.1	26	0	-	0	0	.
chr6	12060814	12060815	chr6:12060815:G:A	rs117280484	G	A	G	Hoxd9_MA0913.1	28	0	+	0	0	.
chr6	12150200	12150201	chr6:12150201:G:A	rs16872314	G	A	G	Hoxd9_MA0913.1	23	0	+	0	0	.
chr6	12376026	12376027	chr6:12376027:T:C	rs6458229	T	C	T	Hoxd9_MA0913.1	5	1	-	8.371167929409406	2.1495047765135378	GTAATAAAAC
chr6	12579117	12579118	chr6:12579118:G:T	rs9357416	G	T	G	Hoxd9_MA0913.1	23	0	-	0	0	.
chr6	12586962	12586963	chr6:12586963:T:A	rs9472109	T	A	T	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr6	13633413	13633414	chr6:13633414:T:C	rs7745281	T	C	T	Hoxd9_MA0913.1	19	0	+	0	0	.
chr6	13755098	13755099	chr6:13755099:G:A	rs55885615	G	A	G	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr6	13927479	13927480	chr6:13927480:T:C	rs9349847	T	C	C	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr6	14100518	14100519	chr6:14100519:G:A	rs115470478	G	A	G	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr6	14207548	14207549	chr6:14207549:T:C	rs1999359	T	C	T	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr6	14771156	14771157	chr6:14771157:C:T	rs72826822	C	T	T	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr6	14917382	14917383	chr6:14917383:T:G	rs114831873	T	G	T	Hoxd9_MA0913.1	4	1	+	8.323343304007485	5.031209052232505	CCAATAAAAA
chr6	15089375	15089376	chr6:15089376:C:T	rs9358050	C	T	C	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr6	15246439	15246440	chr6:15246440:A:C	rs531983615	A	C	A	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr6	15455162	15455163	chr6:15455163:T:C	rs9370814	T	C	C	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr6	15647759	15647760	chr6:15647760:T:A	rs9476883	T	A	T	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr6	16080443	16080444	chr6:16080444:A:C	rs4716041	A	C	A	Hoxd9_MA0913.1	16	0	-	0	0	.
chr6	16103654	16103655	chr6:16103655:G:C	chr6:16103655:G:C	G	C	G	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr6	16115563	16115564	chr6:16115564:T:G	rs9370865	T	G	T	Hoxd9_MA0913.1	26	0	+	0	0	.
chr6	16215488	16215489	chr6:16215489:G:C	rs58507306	G	C	G	Hoxd9_MA0913.1	8	1	+	8.2283733949328	7.801678332738202	GCAATAAAGA
chr6	16216502	16216503	chr6:16216503:G:C	rs1253685362	G	C	G	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr6	16229706	16229707	chr6:16229707:T:G	rs12173591	T	G	t	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr6	16398727	16398728	chr6:16398728:A:G	rs17591931	A	G	A	Hoxd9_MA0913.1	14	0	-	0	0	.
chr6	16639747	16639748	chr6:16639748:T:C	rs12198838	T	C	T	Hoxd9_MA0913.1	3	1	-	8.812437826870472	6.984818886375368	ACAATTAAAA
chr6	16639764	16639765	chr6:16639765:T:C	rs139734471	T	C	T	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr6	16681161	16681162	chr6:16681162:G:C	rs3793104	G	C	C	Hoxd9_MA0913.1	2	1	-	8.594690316172638	7.83890107168488	GCCATTAAAT
chr6	16719126	16719127	chr6:16719127:G:A	rs17670444	G	A	G	Hoxd9_MA0913.1	8	1	+	8.187202972822991	9.760171550280933	GCAATTAAGA
chr6	16978443	16978444	chr6:16978444:C:T	rs9367932	C	T	C	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr6	17038393	17038394	chr6:17038394:G:T	rs9370951	G	T	T	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr6	17062862	17062863	chr6:17062863:A:G	rs9383240	A	G	A	Hoxd9_MA0913.1	15	0	-	0	0	.
chr6	17278218	17278219	chr6:17278219:A:T	rs1745068	A	T	T	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr6	17278227	17278228	chr6:17278228:T:C	rs12204209	T	C	T	Hoxd9_MA0913.1	4	1	+	9.209394307523764	5.917260055748785	GTAATAAAAT
chr6	17442094	17442095	chr6:17442095:A:G	rs3777686	A	G	A	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr6	18100633	18100634	chr6:18100634:G:A	rs9358148	G	A	A	Hoxd9_MA0913.1	11	0	-	0	0	.
chr6	18210135	18210136	chr6:18210136:G:C	chr6:18210136:G:C	G	C	G	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr6	18324753	18324754	chr6:18324754:A:G	rs6915377	A	G	A	Hoxd9_MA0913.1	16	0	-	0	0	.
chr6	18352744	18352745	chr6:18352745:A:C	rs1951924	A	C	.	Hoxd9_MA0913.1	10	0	-	0	0	.
chr6	18427823	18427824	chr6:18427824:G:T	rs576268	G	T	G	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr6	18522636	18522637	chr6:18522637:G:C	rs9396876	G	C	g	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr6	18522652	18522653	chr6:18522653:G:T	rs12661356	G	T	g	Hoxd9_MA0913.1	13	0	+	0	0	.
chr6	18537813	18537814	chr6:18537814:T:C	rs9368002	T	C	T	Hoxd9_MA0913.1	9	1	+	8.594690316172638	7.75646393805828	GCCATTAAAT
chr6	18613867	18613868	chr6:18613868:C:T	rs17642987	C	T	C	Hoxd9_MA0913.1	23	0	+	0	0	.
chr6	19292878	19292879	chr6:19292879:T:C	rs9350120	T	C	C	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr6	19408923	19408924	chr6:19408924:G:A	rs9356694	G	A	G	Hoxd9_MA0913.1	27	0	-	0	0	.
chr6	19545728	19545729	chr6:19545729:A:C	rs1155991	A	C	A	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr6	19725741	19725742	chr6:19725742:T:C	rs12528349	T	C	T	Hoxd9_MA0913.1	4	1	+	8.879672775420401	5.5875385236454225	GCCATAAAAA
chr6	19763421	19763422	chr6:19763422:A:G	rs9350178	A	G	A	Hoxd9_MA0913.1	10	0	-	0	0	.
chr6	19806565	19806566	chr6:19806566:G:C	rs12529148	G	C	G	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr6	19806578	19806579	chr6:19806579:T:C	rs12191540	T	C	T	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr6	20119802	20119803	chr6:20119803:C:A	rs80167365	C	A	C	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr6	20209112	20209113	chr6:20209113:T:G	rs1536581	T	G	T	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr6	20534686	20534687	chr6:20534687:G:T	rs140741461	G	T	G	Hoxd9_MA0913.1	0	1	+	7.932552609785828	4.8954099138329585	GCAGTTAAAA
chr6	20560203	20560204	chr6:20560204:A:T	rs17584626	A	T	A	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr6	20738177	20738178	chr6:20738178:A:G	rs9368229	A	G	A	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr6	20751784	20751785	chr6:20751785:C:A	rs4712539	C	A	A	Hoxd9_MA0913.1	17	0	+	0	0	.
chr6	20802867	20802868	chr6:20802868:T:A	rs4710950	T	A	T	Hoxd9_MA0913.1	6	1	-	8.282172881897674	5.858852934363689	CCAATTAAAA
chr6	21185665	21185666	chr6:21185666:T:C	rs78076731	T	C	C	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr6	21372402	21372403	chr6:21372403:A:G	rs2328601	A	G	G	Hoxd9_MA0913.1	26	0	-	0	0	.
chr6	21372447	21372448	chr6:21372448:G:T	rs9358427	G	T	G	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr6	21486963	21486964	chr6:21486964:C:T	rs4354143	C	T	C	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr6	21730862	21730863	chr6:21730863:A:G	rs9368332	A	G	G	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr6	21740233	21740234	chr6:21740234:A:T	rs12191413	A	T	A	Hoxd9_MA0913.1	12	0	+	0	0	.
chr6	21750727	21750728	chr6:21750728:C:T	chr6:21750728:C:T	C	T	C	Hoxd9_MA0913.1	0	1	-	9.51635951314298	8.568625789732518	GCAATTAAAT
chr6	21967383	21967384	chr6:21967384:G:C	rs868948	G	C	C	Hoxd9_MA0913.1	28	0	+	0	0	.
chr6	21987769	21987770	chr6:21987770:T:A	rs6937945	T	A	T	Hoxd9_MA0913.1	11	0	-	0	0	.
chr6	22043163	22043164	chr6:22043164:A:G	rs196032	A	G	G	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr6	22099188	22099189	chr6:22099189:A:C	rs111770457	A	C	A	Hoxd9_MA0913.1	28	0	-	0	0	.
chr6	22190108	22190109	chr6:22190109:A:G	rs4712661	A	G	A	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr6	22208534	22208535	chr6:22208535:C:A	rs1891088	C	A	C	Hoxd9_MA0913.1	21	0	-	0	0	.
chr6	22352972	22352973	chr6:22352973:T:G	rs1737225	T	G	G	Hoxd9_MA0913.1	28	0	+	0	0	.
chr6	22452287	22452288	chr6:22452288:T:C	rs35835538	T	C	T	Hoxd9_MA0913.1	26	0	-	0	0	.
chr6	22452298	22452299	chr6:22452299:A:C	rs60380354	A	C	A	Hoxd9_MA0913.1	15	0	-	0	0	.
chr6	22452320	22452321	chr6:22452321:A:G	rs35661144	A	G	A	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr6	22458108	22458109	chr6:22458109:A:C	rs28533415	A	C	A	Hoxd9_MA0913.1	0	1	+	8.812437826870472	8.282172881897674	ACAATTAAAA
chr6	22558369	22558370	chr6:22558370:T:C	rs79978023	T	C	T	Hoxd9_MA0913.1	8	1	+	8.32301137036169	7.801678332738202	GCAATAAATA
chr6	22607829	22607830	chr6:22607830:G:A	rs75040753	G	A	G	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr6	22613689	22613690	chr6:22613690:G:A	rs1548236	G	A	A	Hoxd9_MA0913.1	14	0	+	0	0	.
chr6	22613696	22613697	chr6:22613697:G:A	rs145311810	G	A	G	Hoxd9_MA0913.1	21	0	+	0	0	.
chr6	23011813	23011814	chr6:23011814:T:C	rs2498238	T	C	C	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr6	23067444	23067445	chr6:23067445:A:G	rs7753085	A	G	G	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr6	23201005	23201006	chr6:23201006:G:T	rs7771103	G	T	G	Hoxd9_MA0913.1	23	0	+	0	0	.
chr6	23223258	23223259	chr6:23223259:A:G	rs9348551	A	G	A	Hoxd9_MA0913.1	4	1	-	8.282172881897674	4.9900386301226956	CCAATTAAAA
chr6	23678626	23678627	chr6:23678627:C:T	rs7738154	C	T	T	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr6	23873298	23873299	chr6:23873299:G:A	rs9466956	G	A	A	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr6	23993448	23993449	chr6:23993449:A:T	rs10946653	A	T	A	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr6	24337205	24337206	chr6:24337206:C:T	rs7754567	C	T	T	Hoxd9_MA0913.1	1	1	+	8.853608248980283	8.505472621251258	ACAATAAAAA
chr6	24358254	24358255	chr6:24358255:G:C	rs1277349	G	C	G	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr6	24477991	24477992	chr6:24477992:C:G	rs2760147	C	G	G	Hoxd9_MA0913.1	10	0	-	0	0	.
chr6	24493650	24493651	chr6:24493651:T:C	rs2744574	T	C	T	Hoxd9_MA0913.1	4	1	+	9.55752993525279	6.265395683477809	GCAATAAAAT
chr6	24645238	24645239	chr6:24645239:C:T	rs2038138	C	T	T	Hoxd9_MA0913.1	12	0	+	0	0	.
chr6	24822075	24822076	chr6:24822076:T:G	rs4712856	T	G	G	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr6	24902938	24902939	chr6:24902939:C:T	rs80257472	C	T	c	Hoxd9_MA0913.1	27	0	-	0	0	.
chr6	25042496	25042497	chr6:25042497:T:C	rs73732206	T	C	T	Hoxd9_MA0913.1	11	0	+	0	0	.
chr6	25176795	25176796	chr6:25176796:T:C	rs79581740	T	C	T	Hoxd9_MA0913.1	22	0	+	0	0	.
chr6	25229863	25229864	chr6:25229864:C:T	rs35191161	C	T	C	Hoxd9_MA0913.1	29	0	+	0	0	.
chr6	25265808	25265809	chr6:25265809:G:A	rs570255132	G	A	G	Hoxd9_MA0913.1	17	0	-	0	0	.
chr6	25265822	25265823	chr6:25265823:T:C	rs147261987	T	C	T	Hoxd9_MA0913.1	3	1	-	9.760171550280933	7.932552609785828	GCAATTAAAA
chr6	25470018	25470019	chr6:25470019:T:C	rs4712942	T	C	T	Hoxd9_MA0913.1	20	0	-	0	0	.
chr6	25608130	25608131	chr6:25608131:T:C	rs3804107	T	C	C	Hoxd9_MA0913.1	12	0	+	0	0	.
chr6	25608145	25608146	chr6:25608146:G:A	rs3804106	G	A	G	Hoxd9_MA0913.1	27	0	+	0	0	.
chr6	26033017	26033018	chr6:26033018:G:A	rs112700668	G	A	A	Hoxd9_MA0913.1	0	1	+	8.838502353310592	7.890768629900132	GCCATTAAAA
chr6	26034979	26034980	chr6:26034980:G:A	rs4401650	G	A	A	Hoxd9_MA0913.1	16	0	+	0	0	.
chr6	26123310	26123311	chr6:26123311:G:C	rs198822	G	C	C	Hoxd9_MA0913.1	14	0	-	0	0	.
chr6	26123318	26123319	chr6:26123319:T:G	rs59995466	T	G	T	Hoxd9_MA0913.1	6	1	-	8.838502353310592	4.363925490642385	GCCATTAAAA
chr6	26123324	26123325	chr6:26123325:C:T	rs905123367	C	T	C	Hoxd9_MA0913.1	0	1	-	8.838502353310592	7.890768629900132	GCCATTAAAA
chr6	26123329	26123330	chr6:26123330:T:A	rs548119883	T	A	T	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr6	26198670	26198671	chr6:26198671:G:A	rs531429704	G	A	G	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr6	26217616	26217617	chr6:26217617:G:A	rs79662647	G	A	G	Hoxd9_MA0913.1	23	0	+	0	0	.
chr6	26224114	26224115	chr6:26224115:C:G	rs74928264	C	G	C	Hoxd9_MA0913.1	20	0	-	0	0	.
chr6	26224148	26224149	chr6:26224149:A:G	rs79308455	A	G	A	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr6	26367216	26367217	chr6:26367217:C:A	rs9688946	C	A	A	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr6	26575468	26575469	chr6:26575469:G:A	rs9467798	G	A	A	Hoxd9_MA0913.1	0	1	+	9.412035922551908	8.464302199141448	GTAATTAAAA
chr6	27132080	27132081	chr6:27132081:C:T	rs909272335	C	T	C	Hoxd9_MA0913.1	15	0	-	0	0	.
chr6	27168440	27168441	chr6:27168441:C:T	rs188700137	C	T	c	Hoxd9_MA0913.1	0	1	-	8.287725110553424	7.3399913871429625	GTCATAAAAT
chr6	27168445	27168446	chr6:27168446:A:G	rs13219181	A	G	a	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr6	27280897	27280898	chr6:27280898:G:A	chr6:27280898:G:A	G	A	G	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr6	27592725	27592726	chr6:27592726:C:G	rs75482157	C	G	C	Hoxd9_MA0913.1	23	0	+	0	0	.
chr6	27776098	27776099	chr6:27776099:T:C	rs9348777	T	C	t	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr6	27866026	27866027	chr6:27866027:A:C	rs172083	A	C	a	Hoxd9_MA0913.1	12	0	+	0	0	.
chr6	27872635	27872636	chr6:27872636:T:C	rs563986338	T	C	T	Hoxd9_MA0913.1	8	1	-	9.412035922551908	7.839067345093966	GTAATTAAAA
chr6	27872646	27872647	chr6:27872647:G:C	rs9368536	G	C	G	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr6	28162052	28162053	chr6:28162053:T:C	rs9357066	T	C	T	Hoxd9_MA0913.1	9	1	-	7.973723031895638	6.507229691126146	GCAGTAAAAA
chr6	28884714	28884715	chr6:28884715:G:A	rs6456866	G	A	G	Hoxd9_MA0913.1	24	0	-	0	0	.
chr6	28884719	28884720	chr6:28884720:G:A	rs73741219	G	A	G	Hoxd9_MA0913.1	19	0	-	0	0	.
chr6	28927938	28927939	chr6:28927939:G:T	rs72860085	G	T	G	Hoxd9_MA0913.1	17	0	-	0	0	.
chr6	28954289	28954290	chr6:28954290:G:A	rs148462657	G	A	G	Hoxd9_MA0913.1	22	0	-	0	0	.
chr6	29056599	29056600	chr6:29056600:T:G	chr6:29056600:T:G	T	G	t	Hoxd9_MA0913.1	3	1	-	8.635860738282448	4.169630067882392	GCCATAAAAT
chr6	29514170	29514171	chr6:29514171:G:A	rs1010409	G	A	A	Hoxd9_MA0913.1	24	0	+	0	0	.
chr6	29516133	29516134	chr6:29516134:C:T	rs1592411	C	T	C	Hoxd9_MA0913.1	18	0	+	0	0	.
chr6	29634664	29634665	chr6:29634665:A:G	rs55971964	A	G	A	Hoxd9_MA0913.1	22	0	+	0	0	.
chr6	29766406	29766407	chr6:29766407:A:G	rs1737051	A	G	a	Hoxd9_MA0913.1	26	0	+	0	0	.
chr6	29836676	29836677	chr6:29836677:G:A	rs62391986	G	A	-	Hoxd9_MA0913.1	16	0	+	0	0	.
chr6	29844949	29844950	chr6:29844950:C:T	rs72843667	C	T	-	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr6	29867568	29867569	chr6:29867569:A:C	rs55773721	A	C	-	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr6	29875435	29875436	chr6:29875436:T:A	rs1478376786	T	A	-	Hoxd9_MA0913.1	14	0	+	0	0	.
chr6	29887176	29887177	chr6:29887177:G:A	rs1611605	G	A	-	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr6	29911877	29911878	chr6:29911878:T:C	rs2734929	T	C	-	Hoxd9_MA0913.1	7	1	-	8.879672775420401	2.040528298066059	GCCATAAAAA
chr6	29930166	29930167	chr6:29930167:A:G	rs9259870	A	G	-	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr6	29935789	29935790	chr6:29935790:T:A	rs9259941	T	A	-	Hoxd9_MA0913.1	14	0	+	0	0	.
chr6	29977963	29977964	chr6:29977964:C:T	rs9260862	C	T	-	Hoxd9_MA0913.1	14	0	+	0	0	.
chr6	29991359	29991360	chr6:29991360:G:A	rs9260944	G	A	a	Hoxd9_MA0913.1	14	0	+	0	0	.
chr6	30047552	30047553	chr6:30047553:T:C	rs259943	T	C	T	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr6	30171075	30171076	chr6:30171076:C:A	rs41272591	C	A	C	Hoxd9_MA0913.1	1	1	+	9.55752993525279	7.13771155922753	GCAATAAAAT
chr6	30230217	30230218	chr6:30230218:C:T	rs3094139	C	T	C	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr6	30349998	30349999	chr6:30349999:C:T	rs114965506	C	T	C	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr6	30800088	30800089	chr6:30800089:A:C	rs770175459	A	C	A	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr6	30800091	30800092	chr6:30800092:C:T	rs2394403	C	T	C	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr6	30813891	30813892	chr6:30813892:T:C	rs117609393	T	C	T	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr6	30891742	30891743	chr6:30891743:C:T	rs9366761	C	T	C	Hoxd9_MA0913.1	12	0	+	0	0	.
chr6	30955957	30955958	chr6:30955958:T:C	rs73727141	T	C	T	Hoxd9_MA0913.1	28	0	+	0	0	.
chr6	31002135	31002136	chr6:31002136:T:G	rs117572298	T	G	T	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr6	31002160	31002161	chr6:31002161:C:A	rs6920820	C	A	C	Hoxd9_MA0913.1	14	0	+	0	0	.
chr6	31072942	31072943	chr6:31072943:T:G	rs2523888	T	G	G	Hoxd9_MA0913.1	4	1	+	7.973723031895638	4.681588780120659	GCAGTAAAAA
chr6	31072947	31072948	chr6:31072948:A:G	rs2523887	A	G	A	Hoxd9_MA0913.1	9	1	+	7.973723031895638	6.507229691126146	GCAGTAAAAA
chr6	31245635	31245636	chr6:31245636:T:G	rs4332019	T	G	T	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr6	31368155	31368156	chr6:31368156:C:A	rs9266402	C	A	C	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr6	31398817	31398818	chr6:31398818:C:T	rs2596542	C	T	C	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr6	31480755	31480756	chr6:31480756:C:T	rs2248617	C	T	-	Hoxd9_MA0913.1	13	0	+	0	0	.
chr6	31492365	31492366	chr6:31492366:T:C	rs2395034	T	C	-	Hoxd9_MA0913.1	12	0	-	0	0	.
chr6	31526960	31526961	chr6:31526961:C:A	rs2734573	C	A	A	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr6	31717876	31717877	chr6:31717877:G:C	rs3131384	G	C	C	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr6	31750003	31750004	chr6:31750004:C:A	rs183850830	C	A	C	Hoxd9_MA0913.1	0	1	-	9.168223885413955	6.131081189461085	GTAATTAAAT
chr6	31852881	31852882	chr6:31852882:T:C	rs7451017	T	C	C	Hoxd9_MA0913.1	20	0	-	0	0	.
chr6	32256361	32256362	chr6:32256362:G:A	rs3115569	G	A	g	Hoxd9_MA0913.1	24	0	-	0	0	.
chr6	32354094	32354095	chr6:32354095:T:C	rs1265760	T	C	T	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr6	32591434	32591435	chr6:32591435:A:G	rs75928817	A	G	.	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr6	32591438	32591439	chr6:32591439:A:G	rs9270505	A	G	.	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr6	32630014	32630015	chr6:32630015:A:T	rs2395517	A	T	.	Hoxd9_MA0913.1	5	1	-	8.838502353310592	8.879672775420401	GCCATTAAAA
chr6	32630034	32630035	chr6:32630035:T:C	rs2395518	T	C	.	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr6	32635543	32635544	chr6:32635544:C:T	rs62404084	C	T	.	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr6	32667056	32667057	chr6:32667057:C:T	rs9274551	C	T	c	Hoxd9_MA0913.1	15	0	-	0	0	.
chr6	32668743	32668744	chr6:32668744:G:A	rs9274663	G	A	g	Hoxd9_MA0913.1	0	1	+	8.293678209511443	7.34594448610098	GCAATTAAAG
chr6	32668750	32668751	chr6:32668751:A:G	rs9274664	A	G	g	Hoxd9_MA0913.1	7	1	+	8.293678209511443	1.4545337321570975	GCAATTAAAG
chr6	32668765	32668766	chr6:32668766:A:G	rs9274666	A	G	a	Hoxd9_MA0913.1	22	0	+	0	0	.
chr6	32690573	32690574	chr6:32690574:A:T	rs28371255	A	T	A	Hoxd9_MA0913.1	17	0	-	0	0	.
chr6	32690588	32690589	chr6:32690589:T:C	rs28371256	T	C	T	Hoxd9_MA0913.1	2	1	-	9.412035922551908	7.73457748109381	GTAATTAAAA
chr6	32690597	32690598	chr6:32690598:T:G	rs28371257	T	G	T	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr6	32695511	32695512	chr6:32695512:C:A	rs9275292	C	A	A	Hoxd9_MA0913.1	1	1	+	8.812437826870472	6.392619450845213	ACAATTAAAA
chr6	32701182	32701183	chr6:32701183:A:T	rs9275386	A	T	T	Hoxd9_MA0913.1	17	0	-	0	0	.
chr6	32802704	32802705	chr6:32802705:T:C	rs6899857	T	C	T	Hoxd9_MA0913.1	22	0	-	0	0	.
chr6	32944849	32944850	chr6:32944850:T:C	rs17220444	T	C	T	Hoxd9_MA0913.1	3	1	-	8.334848631621252	6.507229691126146	GCAATAAAAG
chr6	32973413	32973414	chr6:32973414:T:C	rs3130597	T	C	C	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr6	32973436	32973437	chr6:32973437:C:A	rs12196597	C	A	C	Hoxd9_MA0913.1	20	0	+	0	0	.
chr6	33029621	33029622	chr6:33029622:T:C	rs148400013	T	C	T	Hoxd9_MA0913.1	7	1	-	8.323343304007485	1.4841988266531423	CCAATAAAAA
chr6	33050864	33050865	chr6:33050865:G:A	rs10434852	G	A	G	Hoxd9_MA0913.1	24	0	+	0	0	.
chr6	33069421	33069422	chr6:33069422:G:C	rs3830065	G	C	G	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr6	33964440	33964441	chr6:33964441:G:A	rs73402437	G	A	G	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr6	34134283	34134284	chr6:34134284:G:T	rs2499730	G	T	G	Hoxd9_MA0913.1	20	0	-	0	0	.
chr6	34152696	34152697	chr6:34152697:G:A	rs28711104	G	A	G	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr6	34360886	34360887	chr6:34360887:A:G	rs114338994	A	G	A	Hoxd9_MA0913.1	7	1	+	8.282172881897674	1.443028404543332	CCAATTAAAA
chr6	35032328	35032329	chr6:35032329:A:G	rs555608445	A	G	A	Hoxd9_MA0913.1	3	1	+	7.7976343601680895	5.970015419672985	GCCATAAAAC
chr6	35611597	35611598	chr6:35611598:A:C	rs6926133	A	C	C	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr6	35794654	35794655	chr6:35794655:C:T	rs2817015	C	T	C	Hoxd9_MA0913.1	18	0	+	0	0	.
chr6	35850990	35850991	chr6:35850991:C:T	rs7752551	C	T	C	Hoxd9_MA0913.1	19	0	+	0	0	.
chr6	35919610	35919611	chr6:35919611:T:C	rs149602139	T	C	T	Hoxd9_MA0913.1	15	0	+	0	0	.
chr6	36018674	36018675	chr6:36018675:C:A	rs851037	C	A	C	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr6	36114838	36114839	chr6:36114839:G:A	rs72657687	G	A	G	Hoxd9_MA0913.1	13	0	+	0	0	.
chr6	36610728	36610729	chr6:36610729:T:C	rs73408383	T	C	C	Hoxd9_MA0913.1	15	0	+	0	0	.
chr6	36783991	36783992	chr6:36783992:A:C	chr6:36783992:A:C	A	C	A	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr6	36964794	36964795	chr6:36964795:T:C	rs1046279	T	C	C	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr6	37055678	37055679	chr6:37055679:C:A	rs77914389	C	A	C	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr6	37089203	37089204	chr6:37089204:G:A	rs78907784	G	A	G	Hoxd9_MA0913.1	23	0	-	0	0	.
chr6	37089238	37089239	chr6:37089239:T:C	rs6934536	T	C	T	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr6	37114251	37114252	chr6:37114252:G:A	rs4345391	G	A	A	Hoxd9_MA0913.1	0	1	+	8.371167929409406	7.423434205998946	GTAATAAAAC
chr6	37134076	37134077	chr6:37134077:G:A	rs9470491	G	A	G	Hoxd9_MA0913.1	24	0	-	0	0	.
chr6	37314879	37314880	chr6:37314880:G:A	rs149702	G	A	G	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr6	37391420	37391421	chr6:37391421:C:T	rs191717756	C	T	C	Hoxd9_MA0913.1	29	0	-	0	0	.
chr6	37662476	37662477	chr6:37662477:C:A	rs12195277	C	A	A	Hoxd9_MA0913.1	1	1	+	8.812437826870472	6.392619450845213	ACAATTAAAA
chr6	37777186	37777187	chr6:37777187:G:A	rs4711512	G	A	A	Hoxd9_MA0913.1	19	0	-	0	0	.
chr6	38068797	38068798	chr6:38068798:G:C	rs12661073	G	C	G	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr6	38076372	38076373	chr6:38076373:A:G	rs7765420	A	G	G	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr6	38269571	38269572	chr6:38269572:G:A	rs62397020	G	A	G	Hoxd9_MA0913.1	29	0	+	0	0	.
chr6	38703548	38703549	chr6:38703549:G:A	rs190937785	G	A	G	Hoxd9_MA0913.1	23	0	+	0	0	.
chr6	38720602	38720603	chr6:38720603:G:T	rs75929781	G	T	G	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr6	38730270	38730271	chr6:38730271:G:A	rs72858210	G	A	G	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr6	38750264	38750265	chr6:38750265:C:T	rs17552881	C	T	T	Hoxd9_MA0913.1	0	1	-	9.412035922551908	8.464302199141448	GTAATTAAAA
chr6	38797527	38797528	chr6:38797528:A:C	rs77946832	A	C	A	Hoxd9_MA0913.1	22	0	-	0	0	.
chr6	38797548	38797549	chr6:38797549:G:C	rs1738234	G	C	G	Hoxd9_MA0913.1	1	1	-	9.760171550280933	6.667606537996219	GCAATTAAAA
chr6	38797552	38797553	chr6:38797553:G:T	rs1678676	G	T	G	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr6	39019715	39019716	chr6:39019716:A:T	rs13201998	A	T	A	Hoxd9_MA0913.1	10	0	+	0	0	.
chr6	39156671	39156672	chr6:39156672:T:G	rs1544935	T	G	T	Hoxd9_MA0913.1	22	0	-	0	0	.
chr6	39369194	39369195	chr6:39369195:T:C	rs72860024	T	C	T	Hoxd9_MA0913.1	3	1	-	7.75646393805828	5.928844997563175	GCCATTAAAC
chr6	40265766	40265767	chr6:40265767:C:T	rs1325548	C	T	C	Hoxd9_MA0913.1	23	0	+	0	0	.
chr6	40283452	40283453	chr6:40283453:C:T	rs78757377	C	T	C	Hoxd9_MA0913.1	29	0	-	0	0	.
chr6	40324429	40324430	chr6:40324430:C:T	rs2395743	C	T	T	Hoxd9_MA0913.1	22	0	-	0	0	.
chr6	40334578	40334579	chr6:40334579:C:G	rs7773241	C	G	C	Hoxd9_MA0913.1	11	0	-	0	0	.
chr6	40615112	40615113	chr6:40615113:A:G	rs2494958	A	G	A	Hoxd9_MA0913.1	10	0	-	0	0	.
chr6	41204516	41204517	chr6:41204517:A:G	rs9471504	A	G	-	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr6	41204524	41204525	chr6:41204525:T:A	rs9471505	T	A	-	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr6	41328940	41328941	chr6:41328941:C:T	rs12525710	C	T	C	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr6	41705328	41705329	chr6:41705329:T:C	rs6906513	T	C	T	Hoxd9_MA0913.1	25	0	-	0	0	.
chr6	41992046	41992047	chr6:41992047:A:G	rs7739971	A	G	G	Hoxd9_MA0913.1	3	1	+	8.32301137036169	6.4953924298665875	GCAATAAATA
chr6	41992054	41992055	chr6:41992055:G:A	rs72853854	G	A	G	Hoxd9_MA0913.1	11	0	+	0	0	.
chr6	42482653	42482654	chr6:42482654:T:C	rs9462805	T	C	T	Hoxd9_MA0913.1	20	0	-	0	0	.
chr6	42565322	42565323	chr6:42565323:A:G	rs73436624	A	G	A	Hoxd9_MA0913.1	3	1	+	8.282172881897674	6.454553941402571	CCAATTAAAA
chr6	42756618	42756619	chr6:42756619:T:C	rs12195802	T	C	C	Hoxd9_MA0913.1	7	1	-	9.801341972390743	2.9621974950363996	GCAATAAAAA
chr6	42980091	42980092	chr6:42980092:C:T	rs12211329	C	T	C	Hoxd9_MA0913.1	12	0	-	0	0	.
chr6	43190087	43190088	chr6:43190088:A:G	rs17209365	A	G	A	Hoxd9_MA0913.1	10	0	-	0	0	.
chr6	43251633	43251634	chr6:43251634:A:G	rs57691532	A	G	A	Hoxd9_MA0913.1	21	0	-	0	0	.
chr6	43567131	43567132	chr6:43567132:G:A	rs78170909	G	A	G	Hoxd9_MA0913.1	29	0	+	0	0	.
chr6	43658395	43658396	chr6:43658396:A:G	rs79474406	A	G	A	Hoxd9_MA0913.1	7	1	+	7.984561357794846	1.1454168804405043	GCAATAAAGT
chr6	44251972	44251973	chr6:44251973:A:C	rs2070695	A	C	A	Hoxd9_MA0913.1	18	0	-	0	0	.
chr6	44313978	44313979	chr6:44313979:C:T	rs17209560	C	T	C	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr6	44537096	44537097	chr6:44537097:A:T	rs73734111	A	T	A	Hoxd9_MA0913.1	2	1	+	9.801341972390743	3.3509979405399606	GCAATAAAAA
chr6	44625287	44625288	chr6:44625288:G:T	rs7759605	G	T	G	Hoxd9_MA0913.1	20	0	+	0	0	.
chr6	44630767	44630768	chr6:44630768:C:G	rs111572610	C	G	C	Hoxd9_MA0913.1	17	0	-	0	0	.
chr6	44664249	44664250	chr6:44664250:A:G	rs472383	A	G	a	Hoxd9_MA0913.1	18	0	+	0	0	.
chr6	44920726	44920727	chr6:44920727:C:T	rs500773	C	T	T	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr6	45074049	45074050	chr6:45074050:G:A	rs62438864	G	A	G	Hoxd9_MA0913.1	18	0	+	0	0	.
chr6	45119175	45119176	chr6:45119176:C:A	rs77629776	C	A	C	Hoxd9_MA0913.1	17	0	+	0	0	.
chr6	45338369	45338370	chr6:45338370:C:G	rs10948227	C	G	C	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr6	45521020	45521021	chr6:45521021:T:C	rs6930053	T	C	C	Hoxd9_MA0913.1	26	0	-	0	0	.
chr6	45554922	45554923	chr6:45554923:C:A	rs1755056	C	A	C	Hoxd9_MA0913.1	25	0	+	0	0	.
chr6	45556818	45556819	chr6:45556819:C:G	rs79469331	C	G	C	Hoxd9_MA0913.1	26	0	+	0	0	.
chr6	45682197	45682198	chr6:45682198:A:G	chr6:45682198:A:G	A	G	A	Hoxd9_MA0913.1	14	0	-	0	0	.
chr6	45682212	45682213	chr6:45682213:G:A	rs144252630	G	A	G	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr6	45710080	45710081	chr6:45710081:A:G	rs16873689	A	G	A	Hoxd9_MA0913.1	16	0	-	0	0	.
chr6	46220016	46220017	chr6:46220017:A:T	rs2799355	A	T	T	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr6	46485024	46485025	chr6:46485025:G:A	rs78268152	G	A	G	Hoxd9_MA0913.1	15	0	+	0	0	.
chr6	46798541	46798542	chr6:46798542:C:T	rs115834882	C	T	T	Hoxd9_MA0913.1	0	1	-	9.209394307523764	8.261660584113304	GTAATAAAAT
chr6	47012621	47012622	chr6:47012622:G:A	rs3857591	G	A	T	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr6	47239809	47239810	chr6:47239810:T:C	rs61574651	T	C	T	Hoxd9_MA0913.1	12	0	-	0	0	.
chr6	47299924	47299925	chr6:47299925:A:G	rs933156057	A	G	A	Hoxd9_MA0913.1	8	1	+	7.7976343601680895	6.224665782710147	GCCATAAAAC
chr6	47734543	47734544	chr6:47734544:A:C	rs9349428	A	C	A	Hoxd9_MA0913.1	14	0	-	0	0	.
chr6	47854944	47854945	chr6:47854945:T:C	rs579329	T	C	T	Hoxd9_MA0913.1	20	0	+	0	0	.
chr6	48641842	48641843	chr6:48641843:T:C	rs1365720	T	C	T	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr6	48736299	48736300	chr6:48736300:C:T	rs4316002	C	T	C	Hoxd9_MA0913.1	10	0	-	0	0	.
chr6	48827204	48827205	chr6:48827205:C:T	chr6:48827205:C:T	C	T	C	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr6	49084864	49084865	chr6:49084865:C:T	rs12207761	C	T	C	Hoxd9_MA0913.1	27	0	+	0	0	.
chr6	49123232	49123233	chr6:49123233:A:G	rs4562139	A	G	A	Hoxd9_MA0913.1	6	1	+	8.838502353310592	2.023081685531251	GCCATTAAAA
chr6	49692704	49692705	chr6:49692705:A:C	rs12624	A	C	C	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr6	49772358	49772359	chr6:49772359:T:G	rs921914815	T	G	T	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr6	49823887	49823888	chr6:49823888:T:A	rs12201468	T	A	A	Hoxd9_MA0913.1	13	0	+	0	0	.
chr6	50889806	50889807	chr6:50889807:A:T	rs61687409	A	T	A	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr6	50958440	50958441	chr6:50958441:T:C	rs6924593	T	C	C	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr6	51094051	51094052	chr6:51094052:T:C	rs9784849	T	C	T	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr6	51094052	51094053	chr6:51094053:T:A	rs283560	T	A	A	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr6	51805175	51805176	chr6:51805176:T:C	rs9474077	T	C	T	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr6	52127008	52127009	chr6:52127009:T:C	rs9474156	T	C	C	Hoxd9_MA0913.1	20	0	+	0	0	.
chr6	52296574	52296575	chr6:52296575:G:T	rs144346234	G	T	G	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr6	52326521	52326522	chr6:52326522:T:A	rs484763	T	A	T	Hoxd9_MA0913.1	15	0	-	0	0	.
chr6	52372169	52372170	chr6:52372170:G:A	rs17650296	G	A	G	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr6	52399715	52399716	chr6:52399716:C:T	rs6933615	C	T	C	Hoxd9_MA0913.1	2	1	+	8.635860738282448	3.1071859034020073	GCCATAAAAT
chr6	52401535	52401536	chr6:52401536:G:A	rs17591255	G	A	G	Hoxd9_MA0913.1	17	0	-	0	0	.
chr6	52567545	52567546	chr6:52567546:T:C	rs926713	T	C	T	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr6	52645631	52645632	chr6:52645632:A:G	rs79947681	A	G	A	Hoxd9_MA0913.1	2	1	+	8.853608248980283	7.176149807522183	ACAATAAAAA
chr6	52645643	52645644	chr6:52645644:C:T	rs10948708	C	T	C	Hoxd9_MA0913.1	14	0	+	0	0	.
chr6	52782658	52782659	chr6:52782659:C:A	rs141260455	C	A	-	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr6	52788781	52788782	chr6:52788782:C:A	rs12200503	C	A	N	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr6	53284533	53284534	chr6:53284534:T:C	rs938112666	T	C	T	Hoxd9_MA0913.1	26	0	+	0	0	.
chr6	53447005	53447006	chr6:53447006:C:G	rs9382209	C	G	G	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr6	53477231	53477232	chr6:53477232:C:T	rs57591604	C	T	T	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr6	53581659	53581660	chr6:53581660:C:T	rs568173	C	T	C	Hoxd9_MA0913.1	22	0	+	0	0	.
chr6	53614070	53614071	chr6:53614071:A:G	rs10948754	A	G	A	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr6	53672506	53672507	chr6:53672507:T:C	rs9474618	T	C	T	Hoxd9_MA0913.1	25	0	-	0	0	.
chr6	53703016	53703017	chr6:53703017:T:A	rs4533979	T	A	T	Hoxd9_MA0913.1	1	1	+	8.490366725581566	6.418683977285333	GTCATTAAAA
chr6	53959854	53959855	chr6:53959855:G:A	rs79822739	G	A	G	Hoxd9_MA0913.1	13	0	-	0	0	.
chr6	54019571	54019572	chr6:54019572:G:A	rs116213400	G	A	G	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr6	54152135	54152136	chr6:54152136:T:C	rs76265697	T	C	T	Hoxd9_MA0913.1	5	1	-	8.853608248980283	2.631945096084414	ACAATAAAAA
chr6	54775713	54775714	chr6:54775714:A:T	rs9474996	A	T	A	Hoxd9_MA0913.1	27	0	+	0	0	.
chr6	54848091	54848092	chr6:54848092:T:G	rs75845634	T	G	T	Hoxd9_MA0913.1	10	0	-	0	0	.
chr6	54848104	54848105	chr6:54848105:T:G	rs4715486	T	G	G	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr6	54848105	54848106	chr6:54848106:G:C	rs115030888	G	C	G	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr6	54978807	54978808	chr6:54978808:A:C	rs3125287	A	C	C	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr6	55278185	55278186	chr6:55278186:A:G	rs76843408	A	G	A	Hoxd9_MA0913.1	21	0	+	0	0	.
chr6	55474681	55474682	chr6:55474682:T:C	rs9370429	T	C	C	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr6	55521061	55521062	chr6:55521062:G:A	rs62405369	G	A	G	Hoxd9_MA0913.1	0	1	+	8.329997507299597	7.382263783889136	GTAATTAAAC
chr6	55560588	55560589	chr6:55560589:C:T	rs9367641	C	T	C	Hoxd9_MA0913.1	13	0	-	0	0	.
chr6	55675885	55675886	chr6:55675886:C:T	rs12660272	C	T	C	Hoxd9_MA0913.1	28	0	-	0	0	.
chr6	56051482	56051483	chr6:56051483:G:A	rs763546231	G	A	G	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr6	56210688	56210689	chr6:56210689:G:T	rs1925141	G	T	T	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr6	56227382	56227383	chr6:56227383:C:T	rs552162137	C	T	C	Hoxd9_MA0913.1	16	0	+	0	0	.
chr6	56227387	56227388	chr6:56227388:C:T	rs3846926	C	T	T	Hoxd9_MA0913.1	21	0	+	0	0	.
chr6	56484952	56484953	chr6:56484953:A:G	rs45486696	A	G	A	Hoxd9_MA0913.1	24	0	-	0	0	.
chr6	56759619	56759620	chr6:56759620:A:G	rs34803237	A	G	A	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr6	57013474	57013475	chr6:57013475:T:A	rs56059696	T	A	T	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr6	57283775	57283776	chr6:57283776:T:C	rs1330632	T	C	C	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr6	57305903	57305904	chr6:57305904:T:C	rs568378538	T	C	T	Hoxd9_MA0913.1	13	0	+	0	0	.
chr6	57313420	57313421	chr6:57313421:A:C	rs6927785	A	C	A	Hoxd9_MA0913.1	20	0	-	0	0	.
chr6	61622054	61622055	chr6:61622055:G:T	rs9361142	G	T	G	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr6	62163277	62163278	chr6:62163278:T:C	rs9354734	T	C	T	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr6	62524679	62524680	chr6:62524680:G:A	rs9446551	G	A	A	Hoxd9_MA0913.1	22	0	+	0	0	.
chr6	62775453	62775454	chr6:62775454:G:T	rs76869560	G	T	G	Hoxd9_MA0913.1	10	0	+	0	0	.
chr6	63251786	63251787	chr6:63251787:T:G	rs10943630	T	G	T	Hoxd9_MA0913.1	26	0	-	0	0	.
chr6	63911242	63911243	chr6:63911243:A:C	rs79189257	A	C	A	Hoxd9_MA0913.1	20	0	+	0	0	.
chr6	64049859	64049860	chr6:64049860:C:T	rs35524411	C	T	C	Hoxd9_MA0913.1	10	0	+	0	0	.
chr6	64302075	64302076	chr6:64302076:C:T	rs142975442	C	T	C	Hoxd9_MA0913.1	22	0	-	0	0	.
chr6	64488025	64488026	chr6:64488026:T:C	rs9359957	T	C	C	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr6	64839117	64839118	chr6:64839118:A:C	rs1495532	A	C	A	Hoxd9_MA0913.1	20	0	+	0	0	.
chr6	65050691	65050692	chr6:65050692:A:C	rs9345593	A	C	A	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr6	65449865	65449866	chr6:65449866:T:C	rs9363362	T	C	T	Hoxd9_MA0913.1	6	1	-	9.453206344661718	2.6377856768823778	GTAATAAAAA
chr6	65459117	65459118	chr6:65459118:A:T	rs768910019	A	T	A	Hoxd9_MA0913.1	3	1	+	8.490366725581566	4.876026856452583	GTCATTAAAA
chr6	66235626	66235627	chr6:66235627:G:A	rs208514	G	A	A	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr6	66449198	66449199	chr6:66449199:A:G	rs2137633	A	G	G	Hoxd9_MA0913.1	25	0	+	0	0	.
chr6	66693512	66693513	chr6:66693513:C:T	rs7757838	C	T	C	Hoxd9_MA0913.1	23	0	-	0	0	.
chr6	66765379	66765380	chr6:66765380:A:G	rs12202536	A	G	A	Hoxd9_MA0913.1	11	0	-	0	0	.
chr6	66765400	66765401	chr6:66765401:T:G	rs12204007	T	G	T	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr6	66865920	66865921	chr6:66865921:C:T	rs9351605	C	T	T	Hoxd9_MA0913.1	27	0	+	0	0	.
chr6	67895595	67895596	chr6:67895596:C:T	rs940470264	C	T	C	Hoxd9_MA0913.1	10	0	+	0	0	.
chr6	68070034	68070035	chr6:68070035:C:A	rs12190622	C	A	A	Hoxd9_MA0913.1	17	0	+	0	0	.
chr6	68512857	68512858	chr6:68512858:T:C	rs10945116	T	C	T	Hoxd9_MA0913.1	5	1	+	8.594690316172638	5.201058966913078	GCCATTAAAT
chr6	68703920	68703921	chr6:68703921:C:A	rs118082074	C	A	C	Hoxd9_MA0913.1	1	1	+	8.838502353310592	6.418683977285333	GCCATTAAAA
chr6	68911513	68911514	chr6:68911514:G:A	rs9446070	G	A	A	Hoxd9_MA0913.1	20	0	+	0	0	.
chr6	69023209	69023210	chr6:69023210:T:A	rs947222	T	A	A	Hoxd9_MA0913.1	16	0	+	0	0	.
chr6	69042890	69042891	chr6:69042891:G:A	rs7760307	G	A	G	Hoxd9_MA0913.1	27	0	+	0	0	.
chr6	69625439	69625440	chr6:69625440:G:C	rs13201075	G	C	G	Hoxd9_MA0913.1	24	0	-	0	0	.
chr6	69780618	69780619	chr6:69780619:A:G	rs9346353	A	G	A	Hoxd9_MA0913.1	14	0	+	0	0	.
chr6	69813925	69813926	chr6:69813926:T:C	rs28645955	T	C	T	Hoxd9_MA0913.1	2	1	-	8.32301137036169	6.645552928903593	GCAATAAATA
chr6	70131564	70131565	chr6:70131565:C:G	rs56149206	C	G	C	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr6	70211685	70211686	chr6:70211686:G:A	rs997953	G	A	A	Hoxd9_MA0913.1	23	0	-	0	0	.
chr6	70445855	70445856	chr6:70445856:G:A	rs113870111	G	A	G	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr6	70666685	70666686	chr6:70666686:T:G	rs77801915	T	G	T	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr6	70994669	70994670	chr6:70994670:G:A	rs2881683	G	A	G	Hoxd9_MA0913.1	13	0	-	0	0	.
chr6	71345576	71345577	chr6:71345577:T:C	rs9346464	T	C	T	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr6	71394475	71394476	chr6:71394476:C:T	rs9364165	C	T	C	Hoxd9_MA0913.1	10	0	-	0	0	.
chr6	71727302	71727303	chr6:71727303:A:G	rs9293851	A	G	A	Hoxd9_MA0913.1	29	0	+	0	0	.
chr6	72031632	72031633	chr6:72031633:C:T	rs188811556	C	T	C	Hoxd9_MA0913.1	18	0	+	0	0	.
chr6	72261629	72261630	chr6:72261630:A:G	rs16882228	A	G	A	Hoxd9_MA0913.1	2	1	+	8.323343304007485	6.645884862549387	CCAATAAAAA
chr6	72417292	72417293	chr6:72417293:T:C	rs12192184	T	C	T	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr6	72689050	72689051	chr6:72689051:A:C	rs80306530	A	C	A	Hoxd9_MA0913.1	14	0	+	0	0	.
chr6	72716405	72716406	chr6:72716406:C:G	rs9293898	C	G	C	Hoxd9_MA0913.1	26	0	-	0	0	.
chr6	72874420	72874421	chr6:72874421:T:C	rs151205583	T	C	t	Hoxd9_MA0913.1	23	0	-	0	0	.
chr6	73105142	73105143	chr6:73105143:C:T	rs113091618	C	T	C	Hoxd9_MA0913.1	13	0	+	0	0	.
chr6	73469671	73469672	chr6:73469672:A:G	rs7453831	A	G	g	Hoxd9_MA0913.1	18	0	-	0	0	.
chr6	73581318	73581319	chr6:73581319:A:C	rs34613232	A	C	A	Hoxd9_MA0913.1	17	0	-	0	0	.
chr6	73879938	73879939	chr6:73879939:A:G	rs79343326	A	G	A	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr6	74270873	74270874	chr6:74270874:C:G	rs1416398	C	G	G	Hoxd9_MA0913.1	15	0	-	0	0	.
chr6	74646614	74646615	chr6:74646615:T:A	rs2485081	T	A	T	Hoxd9_MA0913.1	28	0	-	0	0	.
chr6	75563272	75563273	chr6:75563273:C:A	rs6937154	C	A	C	Hoxd9_MA0913.1	27	0	+	0	0	.
chr6	76358803	76358804	chr6:76358804:C:T	rs1021368	C	T	T	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr6	76439002	76439003	chr6:76439003:T:C	rs9361062	T	C	C	Hoxd9_MA0913.1	6	1	-	8.246554688443613	1.4311340206642729	GTCATTAAAT
chr6	76557797	76557798	chr6:76557798:T:C	rs6453917	T	C	C	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr6	77031340	77031341	chr6:77031341:A:G	rs7772213	A	G	A	Hoxd9_MA0913.1	22	0	+	0	0	.
chr6	77296236	77296237	chr6:77296237:T:G	rs1592219	T	G	T	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr6	77488007	77488008	chr6:77488008:T:C	rs6929862	T	C	C	Hoxd9_MA0913.1	17	0	+	0	0	.
chr6	77698227	77698228	chr6:77698228:C:G	rs7771301	C	G	C	Hoxd9_MA0913.1	20	0	-	0	0	.
chr6	78937645	78937646	chr6:78937646:G:A	rs72902825	G	A	G	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr6	78948397	78948398	chr6:78948398:C:G	rs1283320	C	G	C	Hoxd9_MA0913.1	16	0	+	0	0	.
chr6	79319028	79319029	chr6:79319029:A:T	rs4706771	A	T	A	Hoxd9_MA0913.1	2	1	+	8.812437826870472	2.3620937950196907	ACAATTAAAA
chr6	79402445	79402446	chr6:79402446:G:A	rs196667	G	A	G	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr6	79537500	79537501	chr6:79537501:G:A	rs528911592	G	A	G	Hoxd9_MA0913.1	13	0	-	0	0	.
chr6	79564794	79564795	chr6:79564795:A:G	rs189405802	A	G	A	Hoxd9_MA0913.1	11	0	+	0	0	.
chr6	79815318	79815319	chr6:79815319:A:C	rs3934650	A	C	A	Hoxd9_MA0913.1	25	0	-	0	0	.
chr6	79989551	79989552	chr6:79989552:T:C	rs73747925	T	C	t	Hoxd9_MA0913.1	20	0	-	0	0	.
chr6	80129534	80129535	chr6:80129535:G:T	rs2505932	G	T	t	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr6	80341810	80341811	chr6:80341811:A:T	rs3805852	A	T	T	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr6	80366621	80366622	chr6:80366622:T:C	rs1572941	T	C	T	Hoxd9_MA0913.1	25	0	+	0	0	.
chr6	80544189	80544190	chr6:80544190:A:C	rs10498923	A	C	A	Hoxd9_MA0913.1	23	0	+	0	0	.
chr6	81024527	81024528	chr6:81024528:A:G	rs71566995	A	G	G	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr6	81997336	81997337	chr6:81997337:C:T	rs9361879	C	T	C	Hoxd9_MA0913.1	28	0	+	0	0	.
chr6	82066838	82066839	chr6:82066839:G:A	rs1418293	G	A	A	Hoxd9_MA0913.1	19	0	-	0	0	.
chr6	82072747	82072748	chr6:82072748:G:A	rs13203325	G	A	G	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr6	82442345	82442346	chr6:82442346:A:T	rs3011822	A	T	T	Hoxd9_MA0913.1	4	1	-	9.453206344661718	6.765954920475561	GTAATAAAAA
chr6	82776202	82776203	chr6:82776203:C:T	rs4391233	C	T	C	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr6	83285447	83285448	chr6:83285448:G:C	rs1143795	G	C	G	Hoxd9_MA0913.1	1	1	-	8.853608248980283	5.761043236695571	ACAATAAAAA
chr6	83417871	83417872	chr6:83417872:C:T	rs7744602	C	T	T	Hoxd9_MA0913.1	14	0	-	0	0	.
chr6	83678456	83678457	chr6:83678457:T:C	rs755101	T	C	T	Hoxd9_MA0913.1	27	0	+	0	0	.
chr6	84682346	84682347	chr6:84682347:C:G	rs9444217	C	G	C	Hoxd9_MA0913.1	1	1	+	8.281840948251881	5.189275935967169	GCAATTAATA
chr6	84682354	84682355	chr6:84682355:A:T	rs9450005	A	T	A	Hoxd9_MA0913.1	9	1	+	8.281840948251881	8.038028911113928	GCAATTAATA
chr6	84912606	84912607	chr6:84912607:T:C	rs9353233	T	C	T	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr6	85394750	85394751	chr6:85394751:G:C	rs528426	G	C	C	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr6	85449424	85449425	chr6:85449425:A:G	rs2065114	A	G	G	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr6	86195100	86195101	chr6:86195101:C:T	rs12203813	C	T	c	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr6	86949344	86949345	chr6:86949345:G:A	rs112737711	G	A	G	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr6	87029851	87029852	chr6:87029852:A:G	rs557125826	A	G	A	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr6	87541358	87541359	chr6:87541359:T:C	rs7768758	T	C	T	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr6	87661140	87661141	chr6:87661141:G:C	rs16879675	G	C	G	Hoxd9_MA0913.1	29	0	-	0	0	.
chr6	87938515	87938516	chr6:87938516:T:C	rs9294393	T	C	C	Hoxd9_MA0913.1	7	1	-	8.490366725581566	1.651222248227224	GTCATTAAAA
chr6	88112025	88112026	chr6:88112026:G:A	rs139825020	G	A	A	Hoxd9_MA0913.1	24	0	-	0	0	.
chr6	88301443	88301444	chr6:88301444:C:G	rs6910207	C	G	G	Hoxd9_MA0913.1	23	0	+	0	0	.
chr6	88500272	88500273	chr6:88500273:T:C	rs1325006	T	C	C	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr6	89082131	89082132	chr6:89082132:T:G	rs764035192	T	G	T	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr6	89145703	89145704	chr6:89145704:T:G	rs9451165	T	G	T	Hoxd9_MA0913.1	7	1	-	9.412035922551908	6.118189170833476	GTAATTAAAA
chr6	89241169	89241170	chr6:89241170:G:A	rs1321354	G	A	A	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr6	89575266	89575267	chr6:89575267:G:C	rs7744488	G	C	G	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr6	90040598	90040599	chr6:90040599:A:G	rs7774104	A	G	G	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr6	90107483	90107484	chr6:90107484:C:G	rs207261	C	G	G	Hoxd9_MA0913.1	0	1	-	9.209394307523764	7.731395639140507	GTAATAAAAT
chr6	90118449	90118450	chr6:90118450:T:C	rs207269	T	C	T	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr6	90147158	90147159	chr6:90147159:G:T	rs1010473	G	T	G	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr6	90167938	90167939	chr6:90167939:G:A	rs77010366	G	A	A	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr6	90274130	90274131	chr6:90274131:A:T	rs905671	A	T	T	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr6	90462308	90462309	chr6:90462309:C:T	rs791043	C	T	T	Hoxd9_MA0913.1	13	0	+	0	0	.
chr6	90471220	90471221	chr6:90471221:C:A	rs34791349	C	A	C	Hoxd9_MA0913.1	26	0	+	0	0	.
chr6	90538709	90538710	chr6:90538710:A:C	rs1046272711	A	C	A	Hoxd9_MA0913.1	7	1	+	8.490366725581566	5.196519973863136	GTCATTAAAA
chr6	90652332	90652333	chr6:90652333:T:C	rs1018515	T	C	C	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr6	90700677	90700678	chr6:90700678:C:A	rs1145740	C	A	A	Hoxd9_MA0913.1	10	0	+	0	0	.
chr6	90709650	90709651	chr6:90709651:T:G	rs1487201400	T	G	T	Hoxd9_MA0913.1	25	0	+	0	0	.
chr6	92022852	92022853	chr6:92022853:C:A	rs1948453	C	A	A	Hoxd9_MA0913.1	24	0	-	0	0	.
chr6	92275090	92275091	chr6:92275091:G:A	rs6925015	G	A	G	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr6	92459868	92459869	chr6:92459869:C:T	rs1427147	C	T	C	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr6	92668388	92668389	chr6:92668389:T:C	rs9452076	T	C	T	Hoxd9_MA0913.1	26	0	-	0	0	.
chr6	92777145	92777146	chr6:92777146:T:C	rs150970794	T	C	T	Hoxd9_MA0913.1	23	0	+	0	0	.
chr6	92989612	92989613	chr6:92989613:A:T	rs115627714	A	T	A	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr6	93574976	93574977	chr6:93574977:A:G	rs116915020	A	G	A	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr6	93819563	93819564	chr6:93819564:C:G	rs2152543	C	G	G	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr6	93897482	93897483	chr6:93897483:A:C	rs1488321	A	C	A	Hoxd9_MA0913.1	27	0	-	0	0	.
chr6	94590652	94590653	chr6:94590653:C:G	rs34888999	C	G	C	Hoxd9_MA0913.1	10	0	+	0	0	.
chr6	94651858	94651859	chr6:94651859:A:G	rs2502019	A	G	A	Hoxd9_MA0913.1	3	1	+	8.287725110553424	6.460106170058319	GTCATAAAAT
chr6	95248803	95248804	chr6:95248804:G:A	rs924605675	G	A	g	Hoxd9_MA0913.1	28	0	-	0	0	.
chr6	95365548	95365549	chr6:95365549:C:T	rs36196873	C	T	C	Hoxd9_MA0913.1	10	0	+	0	0	.
chr6	95742744	95742745	chr6:95742745:A:T	rs4839733	A	T	A	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr6	96924002	96924003	chr6:96924003:C:T	rs773838066	C	T	C	Hoxd9_MA0913.1	11	0	-	0	0	.
chr6	96924028	96924029	chr6:96924029:C:A	rs572148618	C	A	C	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr6	98043688	98043689	chr6:98043689:T:A	rs1025199013	T	A	T	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr6	98045132	98045133	chr6:98045133:G:T	rs4499937	G	T	G	Hoxd9_MA0913.1	22	0	+	0	0	.
chr6	98603913	98603914	chr6:98603914:C:A	rs62424049	C	A	C	Hoxd9_MA0913.1	0	1	-	9.453206344661718	6.416063648708848	GTAATAAAAA
chr6	99133145	99133146	chr6:99133146:A:C	rs6918459	A	C	A	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr6	99423133	99423134	chr6:99423134:C:T	rs12198321	C	T	T	Hoxd9_MA0913.1	1	1	+	7.984561357794846	7.636425730065822	GCAATAAAGT
chr6	99563242	99563243	chr6:99563243:C:T	rs6930142	C	T	C	Hoxd9_MA0913.1	13	0	-	0	0	.
chr6	99588552	99588553	chr6:99588553:G:A	rs520545	G	A	A	Hoxd9_MA0913.1	15	0	-	0	0	.
chr6	99588575	99588576	chr6:99588576:T:C	rs672772	T	C	T	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr6	99615108	99615109	chr6:99615109:G:A	rs77190693	G	A	G	Hoxd9_MA0913.1	14	0	-	0	0	.
chr6	100107802	100107803	chr6:100107803:C:T	rs573543363	C	T	C	Hoxd9_MA0913.1	25	0	-	0	0	.
chr6	100615272	100615273	chr6:100615273:C:G	rs240156	C	G	G	Hoxd9_MA0913.1	29	0	-	0	0	.
chr6	100952188	100952189	chr6:100952189:T:G	rs680857	T	G	G	Hoxd9_MA0913.1	17	0	+	0	0	.
chr6	101413929	101413930	chr6:101413930:T:C	rs1856307	T	C	T	Hoxd9_MA0913.1	20	0	+	0	0	.
chr6	101539533	101539534	chr6:101539534:A:C	rs2255306	A	C	C	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr6	101759728	101759729	chr6:101759729:T:A	rs7760353	T	A	T	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr6	102034622	102034623	chr6:102034623:C:T	rs995639	C	T	C	Hoxd9_MA0913.1	21	0	+	0	0	.
chr6	102996680	102996681	chr6:102996681:G:A	rs2051644	G	A	A	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr6	103523095	103523096	chr6:103523096:C:G	rs12174370	C	G	c	Hoxd9_MA0913.1	17	0	+	0	0	.
chr6	103559458	103559459	chr6:103559459:C:G	rs4074221	C	G	C	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr6	103648526	103648527	chr6:103648527:T:C	rs72983251	T	C	T	Hoxd9_MA0913.1	5	1	-	8.853608248980283	2.631945096084414	ACAATAAAAA
chr6	104218455	104218456	chr6:104218456:C:T	rs10872795	C	T	c	Hoxd9_MA0913.1	0	1	-	8.838502353310592	7.890768629900132	GCCATTAAAA
chr6	104326375	104326376	chr6:104326376:C:A	rs274434	C	A	C	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr6	104326393	104326394	chr6:104326394:C:T	rs274435	C	T	C	Hoxd9_MA0913.1	13	0	+	0	0	.
chr6	104686690	104686691	chr6:104686691:A:C	rs999117860	A	C	A	Hoxd9_MA0913.1	18	0	+	0	0	.
chr6	104754993	104754994	chr6:104754994:A:G	rs11156419	A	G	A	Hoxd9_MA0913.1	24	0	+	0	0	.
chr6	104847771	104847772	chr6:104847772:C:T	rs12203954	C	T	T	Hoxd9_MA0913.1	22	0	+	0	0	.
chr6	105280131	105280132	chr6:105280132:G:A	rs7760812	G	A	A	Hoxd9_MA0913.1	27	0	+	0	0	.
chr6	105459546	105459547	chr6:105459547:A:T	rs12200713	A	T	a	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr6	105460079	105460080	chr6:105460080:T:C	rs12196063	T	C	T	Hoxd9_MA0913.1	5	1	-	8.2283733949328	2.006710242036932	GCAATAAAGA
chr6	105592351	105592352	chr6:105592352:T:C	rs17804660	T	C	C	Hoxd9_MA0913.1	21	0	+	0	0	.
chr6	105596690	105596691	chr6:105596691:C:T	rs6938788	C	T	C	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr6	105596705	105596706	chr6:105596706:G:A	rs149183768	G	A	G	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr6	105797494	105797495	chr6:105797495:C:G	rs9486189	C	G	C	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr6	105871685	105871686	chr6:105871686:C:T	rs12525732	C	T	C	Hoxd9_MA0913.1	1	1	+	8.678133135028622	8.329997507299597	GCAATTAAAC
chr6	105994361	105994362	chr6:105994362:T:C	rs527740637	T	C	T	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr6	105994393	105994394	chr6:105994394:C:T	rs76070991	C	T	C	Hoxd9_MA0913.1	28	0	+	0	0	.
chr6	106039887	106039888	chr6:106039888:C:T	rs9480636	C	T	C	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr6	106253427	106253428	chr6:106253428:C:T	rs2743564	C	T	C	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr6	106253460	106253461	chr6:106253461:G:T	rs73522642	G	T	T	Hoxd9_MA0913.1	28	0	+	0	0	.
chr6	106442208	106442209	chr6:106442209:C:G	rs875262	C	G	C	Hoxd9_MA0913.1	8	1	-	7.984561357794846	7.557866295600249	GCAATAAAGT
chr6	106547315	106547316	chr6:106547316:G:A	rs141316656	G	A	G	Hoxd9_MA0913.1	1	1	-	8.32301137036169	7.974875742632667	GCAATAAATA
chr6	106547316	106547317	chr6:106547317:C:A	rs2615209	C	A	A	Hoxd9_MA0913.1	0	1	-	8.32301137036169	5.285868674408823	GCAATAAATA
chr6	106547322	106547323	chr6:106547323:G:A	rs1770723	G	A	A	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr6	106547639	106547640	chr6:106547640:G:A	rs1676028	G	A	G	Hoxd9_MA0913.1	21	0	+	0	0	.
chr6	106576556	106576557	chr6:106576557:A:G	rs9480689	A	G	G	Hoxd9_MA0913.1	7	1	+	8.2283733949328	1.3892289175784578	GCAATAAAGA
chr6	106613454	106613455	chr6:106613455:C:T	rs59962977	C	T	C	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr6	106799630	106799631	chr6:106799631:T:C	chr6:106799631:T:C	T	C	T	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr6	107233341	107233342	chr6:107233342:T:C	rs61284648	T	C	T	Hoxd9_MA0913.1	27	0	-	0	0	.
chr6	107330220	107330221	chr6:107330221:G:A	rs2500576	G	A	A	Hoxd9_MA0913.1	18	0	-	0	0	.
chr6	107330234	107330235	chr6:107330235:A:G	rs74891097	A	G	A	Hoxd9_MA0913.1	4	1	-	8.879672775420401	5.5875385236454225	GCCATAAAAA
chr6	107591454	107591455	chr6:107591455:T:C	rs4946841	T	C	C	Hoxd9_MA0913.1	16	0	+	0	0	.
chr6	107735460	107735461	chr6:107735461:T:G	rs77318873	T	G	T	Hoxd9_MA0913.1	28	0	-	0	0	.
chr6	107769594	107769595	chr6:107769595:A:G	rs72933169	A	G	A	Hoxd9_MA0913.1	27	0	-	0	0	.
chr6	107787255	107787256	chr6:107787256:A:G	rs558686485	A	G	A	Hoxd9_MA0913.1	22	0	-	0	0	.
chr6	107807380	107807381	chr6:107807381:C:T	rs9386667	C	T	C	Hoxd9_MA0913.1	23	0	-	0	0	.
chr6	107832240	107832241	chr6:107832241:A:G	rs7754063	A	G	A	Hoxd9_MA0913.1	0	1	+	8.853608248980283	9.801341972390743	ACAATAAAAA
chr6	108340220	108340221	chr6:108340221:A:C	rs9486861	A	C	A	Hoxd9_MA0913.1	28	0	-	0	0	.
chr6	108599206	108599207	chr6:108599207:C:G	rs774293705	C	G	C	Hoxd9_MA0913.1	25	0	-	0	0	.
chr6	108676814	108676815	chr6:108676815:A:G	rs768516951	A	G	A	Hoxd9_MA0913.1	3	1	+	8.838502353310592	7.010883412815486	GCCATTAAAA
chr6	109007228	109007229	chr6:109007229:G:A	rs1407241	G	A	G	Hoxd9_MA0913.1	10	0	-	0	0	.
chr6	109240364	109240365	chr6:109240365:G:A	rs74544194	G	A	A	Hoxd9_MA0913.1	2	1	+	8.123883530932645	9.801341972390743	GCGATAAAAA
chr6	110471510	110471511	chr6:110471511:G:A	rs67460788	G	A	G	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr6	110599715	110599716	chr6:110599716:T:G	rs75741222	T	G	t	Hoxd9_MA0913.1	19	0	-	0	0	.
chr6	110616905	110616906	chr6:110616906:A:G	rs2817804	A	G	G	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr6	110656766	110656767	chr6:110656767:A:G	rs2691171	A	G	G	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr6	110681754	110681755	chr6:110681755:A:G	rs79137173	A	G	A	Hoxd9_MA0913.1	15	0	+	0	0	.
chr6	110816238	110816239	chr6:110816239:A:G	rs149342812	A	G	A	Hoxd9_MA0913.1	0	1	+	8.812437826870472	9.760171550280933	ACAATTAAAA
chr6	110983610	110983611	chr6:110983611:T:C	rs6900618	T	C	T	Hoxd9_MA0913.1	7	1	-	9.453206344661718	2.614061867307375	GTAATAAAAA
chr6	111074421	111074422	chr6:111074422:C:T	rs56351290	C	T	C	Hoxd9_MA0913.1	0	1	-	8.879672775420401	7.931939052009941	GCCATAAAAA
chr6	111337167	111337168	chr6:111337168:G:T	rs118202	G	T	T	Hoxd9_MA0913.1	12	0	+	0	0	.
chr6	111481093	111481094	chr6:111481094:T:G	rs78398192	T	G	T	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr6	111586782	111586783	chr6:111586783:T:C	rs367901397	T	C	T	Hoxd9_MA0913.1	28	0	+	0	0	.
chr6	111594360	111594361	chr6:111594361:C:G	rs174388	C	G	C	Hoxd9_MA0913.1	18	0	-	0	0	.
chr6	111615260	111615261	chr6:111615261:A:G	rs9487684	A	G	A	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr6	111686647	111686648	chr6:111686648:T:G	rs77234851	T	G	T	Hoxd9_MA0913.1	13	0	+	0	0	.
chr6	111974259	111974260	chr6:111974260:T:C	rs12660960	T	C	T	Hoxd9_MA0913.1	28	0	-	0	0	.
chr6	112202345	112202346	chr6:112202346:C:A	rs4947178	C	A	A	Hoxd9_MA0913.1	28	0	+	0	0	.
chr6	112233872	112233873	chr6:112233873:T:C	rs186536716	T	C	T	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr6	112246316	112246317	chr6:112246317:A:G	rs6921858	A	G	A	Hoxd9_MA0913.1	15	0	-	0	0	.
chr6	112269479	112269480	chr6:112269480:A:G	rs17680579	A	G	A	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr6	112468856	112468857	chr6:112468857:C:T	rs9387082	C	T	C	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr6	112684915	112684916	chr6:112684916:C:T	rs1551473	C	T	c	Hoxd9_MA0913.1	29	0	-	0	0	.
chr6	112701587	112701588	chr6:112701588:G:A	rs79871599	G	A	G	Hoxd9_MA0913.1	20	0	-	0	0	.
chr6	112980112	112980113	chr6:112980113:A:G	rs78082469	A	G	A	Hoxd9_MA0913.1	4	1	-	8.853608248980283	5.561473997205303	ACAATAAAAA
chr6	113074309	113074310	chr6:113074310:A:T	rs6935658	A	T	T	Hoxd9_MA0913.1	11	0	+	0	0	.
chr6	113140925	113140926	chr6:113140926:T:A	rs6937893	T	A	T	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr6	113292409	113292410	chr6:113292410:T:C	rs117549274	T	C	T	Hoxd9_MA0913.1	8	1	-	8.287725110553424	6.714756533095481	GTCATAAAAT
chr6	113357359	113357360	chr6:113357360:C:T	rs112323332	C	T	G	Hoxd9_MA0913.1	28	0	-	0	0	.
chr6	113357373	113357374	chr6:113357374:T:C	rs77734112	T	C	T	Hoxd9_MA0913.1	14	0	-	0	0	.
chr6	113445248	113445249	chr6:113445249:G:C	rs183973383	G	C	G	Hoxd9_MA0913.1	11	0	+	0	0	.
chr6	113636378	113636379	chr6:113636379:C:T	rs1416453	C	T	C	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr6	113654302	113654303	chr6:113654303:A:C	rs78958594	A	C	A	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr6	113857456	113857457	chr6:113857457:T:C	rs193287289	T	C	T	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr6	113901545	113901546	chr6:113901546:C:T	rs2810160	C	T	T	Hoxd9_MA0913.1	11	0	-	0	0	.
chr6	113976708	113976709	chr6:113976709:A:G	rs73548636	A	G	A	Hoxd9_MA0913.1	5	1	+	7.984561357794846	1.7628982048989783	GCAATAAAGT
chr6	114313833	114313834	chr6:114313834:G:A	rs10447428	G	A	G	Hoxd9_MA0913.1	16	0	+	0	0	.
chr6	114364710	114364711	chr6:114364711:G:A	rs9384899	G	A	G	Hoxd9_MA0913.1	23	0	-	0	0	.
chr6	115150885	115150886	chr6:115150886:A:G	rs144707509	A	G	A	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr6	115959192	115959193	chr6:115959193:C:T	rs12203739	C	T	C	Hoxd9_MA0913.1	12	0	+	0	0	.
chr6	116483078	116483079	chr6:116483079:C:T	rs74360304	C	T	C	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr6	116529808	116529809	chr6:116529809:C:G	rs1321532	C	G	C	Hoxd9_MA0913.1	26	0	-	0	0	.
chr6	116878227	116878228	chr6:116878228:C:T	rs11754683	C	T	C	Hoxd9_MA0913.1	11	0	-	0	0	.
chr6	116928220	116928221	chr6:116928221:A:C	rs595698	A	C	C	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr6	117196635	117196636	chr6:117196636:T:A	rs12194435	T	A	T	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr6	117322733	117322734	chr6:117322734:A:G	rs3798375	A	G	A	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr6	117544764	117544765	chr6:117544765:C:T	rs9320608	C	T	C	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr6	118054334	118054335	chr6:118054335:A:G	rs11153719	A	G	A	Hoxd9_MA0913.1	20	0	+	0	0	.
chr6	118516104	118516105	chr6:118516105:T:C	rs2213855	T	C	T	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr6	118686263	118686264	chr6:118686264:T:G	rs62422258	T	G	G	Hoxd9_MA0913.1	3	1	-	8.812437826870472	4.346207156470417	ACAATTAAAA
chr6	118762740	118762741	chr6:118762741:G:A	rs62424027	G	A	G	Hoxd9_MA0913.1	27	0	-	0	0	.
chr6	118777148	118777149	chr6:118777149:C:G	rs6912762	C	G	G	Hoxd9_MA0913.1	0	1	-	7.984561357794846	6.506562689411589	GCAATAAAGT
chr6	118784253	118784254	chr6:118784254:T:C	rs17080617	T	C	T	Hoxd9_MA0913.1	1	1	+	8.287725110553424	8.635860738282448	GTCATAAAAT
chr6	118821100	118821101	chr6:118821101:T:C	rs12190099	T	C	T	Hoxd9_MA0913.1	3	1	-	8.282172881897674	6.454553941402571	CCAATTAAAA
chr6	119240787	119240788	chr6:119240788:T:C	chr6:119240788:T:C	T	C	T	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr6	119240812	119240813	chr6:119240813:T:G	rs567419646	T	G	T	Hoxd9_MA0913.1	12	0	+	0	0	.
chr6	119243877	119243878	chr6:119243878:A:G	rs7753492	A	G	A	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr6	119515112	119515113	chr6:119515113:A:G	rs7763850	A	G	G	Hoxd9_MA0913.1	4	1	-	7.984561357794846	4.692427106019867	GCAATAAAGT
chr6	119638852	119638853	chr6:119638853:A:G	rs11965268	A	G	A	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr6	119799503	119799504	chr6:119799504:G:A	rs11153847	G	A	G	Hoxd9_MA0913.1	1	1	-	8.187202972822991	7.839067345093966	GCAATTAAGA
chr6	119843334	119843335	chr6:119843335:C:T	rs4245504	C	T	c	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr6	119895334	119895335	chr6:119895335:G:A	rs9374844	G	A	G	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr6	119996215	119996216	chr6:119996216:A:C	rs17638707	A	C	C	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr6	119996531	119996532	chr6:119996532:C:T	rs17558169	C	T	C	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr6	120212387	120212388	chr6:120212388:A:G	rs1535590	A	G	A	Hoxd9_MA0913.1	3	1	+	8.287725110553424	6.460106170058319	GTCATAAAAT
chr6	120592065	120592066	chr6:120592066:T:C	rs2788668	T	C	C	Hoxd9_MA0913.1	12	0	-	0	0	.
chr6	121305868	121305869	chr6:121305869:T:C	rs190794533	T	C	T	Hoxd9_MA0913.1	7	1	-	9.209394307523764	2.370249830169422	GTAATAAAAT
chr6	121573293	121573294	chr6:121573294:C:T	rs118160694	C	T	C	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr6	121573914	121573915	chr6:121573915:A:G	rs4946578	A	G	G	Hoxd9_MA0913.1	10	0	+	0	0	.
chr6	121881162	121881163	chr6:121881163:T:C	rs183770692	T	C	T	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr6	122026890	122026891	chr6:122026891:A:T	rs1521205	A	T	A	Hoxd9_MA0913.1	8	1	+	9.209394307523764	7.731063705494713	GTAATAAAAT
chr6	122366592	122366593	chr6:122366593:A:G	rs745050	A	G	G	Hoxd9_MA0913.1	8	1	+	8.371167929409406	6.798199351951464	GTAATAAAAC
chr6	122917562	122917563	chr6:122917563:G:C	rs7753920	G	C	G	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr6	123352309	123352310	chr6:123352310:G:T	rs9375250	G	T	T	Hoxd9_MA0913.1	16	0	+	0	0	.
chr6	123393618	123393619	chr6:123393619:C:T	rs41284430	C	T	C	Hoxd9_MA0913.1	0	1	-	8.719303557138431	7.7715698337279715	GCAATAAAAC
chr6	123528755	123528756	chr6:123528756:C:T	rs138515208	C	T	T	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr6	124125974	124125975	chr6:124125975:C:T	rs163294	C	T	C	Hoxd9_MA0913.1	28	0	-	0	0	.
chr6	124274634	124274635	chr6:124274635:A:G	rs2689894	A	G	A	Hoxd9_MA0913.1	3	1	+	8.2283733949328	6.4007544544376955	GCAATAAAGA
chr6	124480164	124480165	chr6:124480165:A:G	rs776436732	A	G	A	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr6	124718401	124718402	chr6:124718402:A:G	rs6923037	A	G	A	Hoxd9_MA0913.1	25	0	-	0	0	.
chr6	124796174	124796175	chr6:124796175:A:C	rs545714987	A	C	A	Hoxd9_MA0913.1	5	1	+	8.879672775420401	5.444871004051032	GCCATAAAAA
chr6	124854466	124854467	chr6:124854467:T:A	rs140044454	T	A	T	Hoxd9_MA0913.1	10	0	+	0	0	.
chr6	124936067	124936068	chr6:124936068:T:A	rs4449647	T	A	A	Hoxd9_MA0913.1	14	0	-	0	0	.
chr6	124971765	124971766	chr6:124971766:A:T	rs62431250	A	T	A	Hoxd9_MA0913.1	11	0	-	0	0	.
chr6	125165287	125165288	chr6:125165288:T:C	rs492129	T	C	T	Hoxd9_MA0913.1	26	0	+	0	0	.
chr6	125232366	125232367	chr6:125232367:A:T	rs4896848	A	T	A	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr6	125376105	125376106	chr6:125376106:T:G	rs1487455884	T	G	T	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr6	125679015	125679016	chr6:125679016:A:G	rs4895798	A	G	G	Hoxd9_MA0913.1	20	0	+	0	0	.
chr6	126154078	126154079	chr6:126154079:T:G	rs117102925	T	G	T	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr6	126806000	126806001	chr6:126806001:A:G	rs980760596	A	G	A	Hoxd9_MA0913.1	21	0	+	0	0	.
chr6	127342475	127342476	chr6:127342476:A:T	chr6:127342476:A:T	A	T	A	Hoxd9_MA0913.1	17	0	+	0	0	.
chr6	127342476	127342477	chr6:127342477:A:C	chr6:127342477:A:C	A	C	A	Hoxd9_MA0913.1	18	0	+	0	0	.
chr6	127421113	127421114	chr6:127421114:A:T	rs73771687	A	T	A	Hoxd9_MA0913.1	21	0	-	0	0	.
chr6	127440186	127440187	chr6:127440187:A:T	rs2326592	A	T	T	Hoxd9_MA0913.1	3	1	+	8.853608248980283	5.2392683798513	ACAATAAAAA
chr6	127487909	127487910	chr6:127487910:C:A	rs514064	C	A	C	Hoxd9_MA0913.1	0	1	+	8.282172881897674	8.812437826870472	CCAATTAAAA
chr6	127970053	127970054	chr6:127970054:C:T	rs3190930	C	T	C	Hoxd9_MA0913.1	20	0	+	0	0	.
chr6	128067928	128067929	chr6:128067929:T:C	rs4897243	T	C	C	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr6	128494533	128494534	chr6:128494534:C:A	rs13196432	C	A	A	Hoxd9_MA0913.1	1	1	+	7.932552609785828	5.51273423376057	GCAGTTAAAA
chr6	128572388	128572389	chr6:128572389:A:T	rs12526667	A	T	T	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr6	128632521	128632522	chr6:128632522:G:T	rs576455717	G	T	G	Hoxd9_MA0913.1	1	1	-	8.812437826870472	6.392619450845213	ACAATTAAAA
chr6	128725110	128725111	chr6:128725111:A:G	rs76572639	A	G	G	Hoxd9_MA0913.1	16	0	+	0	0	.
chr6	128738315	128738316	chr6:128738316:T:C	rs9492066	T	C	T	Hoxd9_MA0913.1	24	0	-	0	0	.
chr6	128807508	128807509	chr6:128807509:C:T	rs2808127	C	T	T	Hoxd9_MA0913.1	0	1	-	8.838502353310592	7.890768629900132	GCCATTAAAA
chr6	128981901	128981902	chr6:128981902:C:A	rs78072825	C	A	C	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr6	128990591	128990592	chr6:128990592:C:T	rs12204632	C	T	C	Hoxd9_MA0913.1	1	1	+	7.83890107168488	7.490765443955856	GCGATTAAAT
chr6	129040048	129040049	chr6:129040049:G:A	rs6569575	G	A	G	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr6	129183686	129183687	chr6:129183687:G:C	chr6:129183687:G:C	G	C	G	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr6	129206388	129206389	chr6:129206389:G:A	rs3778132	G	A	A	Hoxd9_MA0913.1	22	0	-	0	0	.
chr6	129365004	129365005	chr6:129365005:G:A	rs9388696	G	A	g	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr6	129394676	129394677	chr6:129394677:C:T	rs6914003	C	T	C	Hoxd9_MA0913.1	15	0	-	0	0	.
chr6	129607835	129607836	chr6:129607836:A:G	rs576010440	A	G	A	Hoxd9_MA0913.1	9	1	+	8.490366725581566	7.023873384812075	GTCATTAAAA
chr6	129670724	129670725	chr6:129670725:A:C	rs6569618	A	C	C	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr6	129752276	129752277	chr6:129752277:T:A	rs189537084	T	A	T	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr6	130132696	130132697	chr6:130132697:C:T	rs3777428	C	T	T	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr6	130229903	130229904	chr6:130229904:G:A	rs117843521	G	A	G	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr6	130428070	130428071	chr6:130428071:C:T	rs10485236	C	T	C	Hoxd9_MA0913.1	24	0	-	0	0	.
chr6	130428071	130428072	chr6:130428072:G:A	rs76737553	G	A	g	Hoxd9_MA0913.1	23	0	-	0	0	.
chr6	130437977	130437978	chr6:130437978:C:G	rs10456986	C	G	G	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr6	130593015	130593016	chr6:130593016:A:G	rs9402253	A	G	G	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr6	130969333	130969334	chr6:130969334:G:T	rs9372985	G	T	G	Hoxd9_MA0913.1	17	0	+	0	0	.
chr6	130970556	130970557	chr6:130970557:C:T	rs9385568	C	T	T	Hoxd9_MA0913.1	12	0	-	0	0	.
chr6	131112535	131112536	chr6:131112536:T:C	rs7769831	T	C	T	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr6	131729579	131729580	chr6:131729580:C:T	rs1367333565	C	T	c	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr6	131954194	131954195	chr6:131954195:A:G	rs146829119	A	G	A	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr6	132016820	132016821	chr6:132016821:T:C	rs2022388	T	C	T	Hoxd9_MA0913.1	24	0	-	0	0	.
chr6	132320104	132320105	chr6:132320105:T:A	rs668365	T	A	T	Hoxd9_MA0913.1	16	0	-	0	0	.
chr6	132391577	132391578	chr6:132391578:C:T	rs114205789	C	T	C	Hoxd9_MA0913.1	29	0	+	0	0	.
chr6	132399338	132399339	chr6:132399339:G:A	rs951467	G	A	A	Hoxd9_MA0913.1	13	0	-	0	0	.
chr6	132527965	132527966	chr6:132527966:T:G	rs190820066	T	G	T	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr6	132631107	132631108	chr6:132631108:G:A	rs34951745	G	A	G	Hoxd9_MA0913.1	19	0	+	0	0	.
chr6	132687831	132687832	chr6:132687832:C:T	rs2745430	C	T	C	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr6	132736654	132736655	chr6:132736655:G:C	rs767148	G	C	G	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr6	132819198	132819199	chr6:132819199:A:G	rs6924403	A	G	.	Hoxd9_MA0913.1	9	1	+	8.490366725581566	7.023873384812075	GTCATTAAAA
chr6	132961163	132961164	chr6:132961164:C:T	rs385727	C	T	T	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr6	132961164	132961165	chr6:132961165:C:A	rs403364	C	A	C	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr6	132961832	132961833	chr6:132961833:T:C	rs77720748	T	C	T	Hoxd9_MA0913.1	17	0	-	0	0	.
chr6	133286995	133286996	chr6:133286996:T:C	rs73776019	T	C	T	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr6	133287009	133287010	chr6:133287010:G:C	chr6:133287010:G:C	G	C	G	Hoxd9_MA0913.1	12	0	+	0	0	.
chr6	133287010	133287011	chr6:133287011:T:C	rs79666025	T	C	T	Hoxd9_MA0913.1	13	0	+	0	0	.
chr6	133398053	133398054	chr6:133398054:A:G	rs180742365	A	G	A	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr6	133418408	133418409	chr6:133418409:C:G	rs212790	C	G	C	Hoxd9_MA0913.1	25	0	-	0	0	.
chr6	133584171	133584172	chr6:133584172:G:T	rs35943527	G	T	G	Hoxd9_MA0913.1	14	0	+	0	0	.
chr6	133683145	133683146	chr6:133683146:C:A	rs73557137	C	A	C	Hoxd9_MA0913.1	13	0	+	0	0	.
chr6	133777045	133777046	chr6:133777046:T:C	rs12204363	T	C	C	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr6	133816325	133816326	chr6:133816326:G:T	rs1311797357	G	T	G	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr6	133956439	133956440	chr6:133956440:A:G	rs76254895	A	G	A	Hoxd9_MA0913.1	13	0	+	0	0	.
chr6	134289091	134289092	chr6:134289092:T:C	rs9373089	T	C	T	Hoxd9_MA0913.1	25	0	+	0	0	.
chr6	134295810	134295811	chr6:134295811:A:G	rs4896039	A	G	G	Hoxd9_MA0913.1	17	0	+	0	0	.
chr6	134306146	134306147	chr6:134306147:C:T	rs13196672	C	T	C	Hoxd9_MA0913.1	28	0	+	0	0	.
chr6	134347374	134347375	chr6:134347375:A:T	rs6924823	A	T	T	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr6	134410673	134410674	chr6:134410674:T:C	rs72976345	T	C	T	Hoxd9_MA0913.1	11	0	+	0	0	.
chr6	134435988	134435989	chr6:134435989:C:T	rs4896046	C	T	C	Hoxd9_MA0913.1	19	0	+	0	0	.
chr6	134678505	134678506	chr6:134678506:T:G	rs6569960	T	G	G	Hoxd9_MA0913.1	8	1	+	8.281840948251881	8.187202972822991	GCAATTAATA
chr6	134698215	134698216	chr6:134698216:T:A	rs76507868	T	A	t	Hoxd9_MA0913.1	12	0	-	0	0	.
chr6	134707245	134707246	chr6:134707246:C:T	rs79025252	C	T	C	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr6	135440094	135440095	chr6:135440095:A:C	rs2757643	A	C	A	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr6	136138110	136138111	chr6:136138111:A:G	rs2046091	A	G	A	Hoxd9_MA0913.1	20	0	-	0	0	.
chr6	136290972	136290973	chr6:136290973:C:T	rs3757156	C	T	C	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr6	136528145	136528146	chr6:136528146:C:T	rs144439481	C	T	C	Hoxd9_MA0913.1	17	0	+	0	0	.
chr6	136629125	136629126	chr6:136629126:A:T	rs17796618	A	T	T	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr6	136648018	136648019	chr6:136648019:A:G	rs73556291	A	G	A	Hoxd9_MA0913.1	12	0	+	0	0	.
chr6	136790288	136790289	chr6:136790289:G:A	rs17065625	G	A	g	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr6	137102641	137102642	chr6:137102642:G:A	rs17066063	G	A	G	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr6	137264907	137264908	chr6:137264908:T:C	rs12176587	T	C	C	Hoxd9_MA0913.1	16	0	+	0	0	.
chr6	137264920	137264921	chr6:137264921:T:C	rs12176588	T	C	T	Hoxd9_MA0913.1	29	0	+	0	0	.
chr6	137273207	137273208	chr6:137273208:C:T	rs9494707	C	T	C	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr6	137283975	137283976	chr6:137283976:C:T	rs17066279	C	T	C	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr6	137334320	137334321	chr6:137334321:A:T	rs3850213	A	T	A	Hoxd9_MA0913.1	7	1	+	9.801341972390743	6.507495220672311	GCAATAAAAA
chr6	137391347	137391348	chr6:137391348:A:G	rs9321598	A	G	G	Hoxd9_MA0913.1	16	0	-	0	0	.
chr6	137487649	137487650	chr6:137487650:G:A	rs734669	G	A	G	Hoxd9_MA0913.1	18	0	+	0	0	.
chr6	137512918	137512919	chr6:137512919:T:C	rs10428802	T	C	C	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr6	137700475	137700476	chr6:137700476:G:A	rs4896297	G	A	G	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr6	137811378	137811379	chr6:137811379:T:G	rs10499197	T	G	T	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr6	137968315	137968316	chr6:137968316:T:C	rs934603804	T	C	T	Hoxd9_MA0913.1	18	0	-	0	0	.
chr6	138104645	138104646	chr6:138104646:C:T	rs9484114	C	T	T	Hoxd9_MA0913.1	22	0	-	0	0	.
chr6	138105963	138105964	chr6:138105964:C:T	rs569652930	C	T	C	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr6	138308596	138308597	chr6:138308597:G:A	rs113382385	G	A	G	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr6	138310438	138310439	chr6:138310439:G:A	rs9495009	G	A	G	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr6	138310465	138310466	chr6:138310466:A:G	rs1201245924	A	G	A	Hoxd9_MA0913.1	14	0	+	0	0	.
chr6	138478269	138478270	chr6:138478270:C:T	rs72973301	C	T	C	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr6	138655231	138655232	chr6:138655232:A:G	rs79122911	A	G	A	Hoxd9_MA0913.1	3	1	+	8.812437826870472	6.984818886375368	ACAATTAAAA
chr6	138958336	138958337	chr6:138958337:T:C	rs182376780	T	C	T	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr6	139093776	139093777	chr6:139093777:G:A	rs9321699	G	A	G	Hoxd9_MA0913.1	28	0	-	0	0	.
chr6	139522649	139522650	chr6:139522650:A:G	rs4896469	A	G	A	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr6	139763059	139763060	chr6:139763060:T:C	rs73775688	T	C	T	Hoxd9_MA0913.1	26	0	-	0	0	.
chr6	139940729	139940730	chr6:139940730:G:A	rs609488	G	A	G	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr6	139944067	139944068	chr6:139944068:G:C	rs671038	G	C	C	Hoxd9_MA0913.1	0	1	+	9.412035922551908	7.934037254168651	GTAATTAAAA
chr6	140731999	140732000	chr6:140732000:G:C	rs2460957	G	C	G	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr6	141488441	141488442	chr6:141488442:C:T	rs9376625	C	T	C	Hoxd9_MA0913.1	12	0	+	0	0	.
chr6	141692780	141692781	chr6:141692781:A:G	rs9484547	A	G	A	Hoxd9_MA0913.1	8	1	+	8.282172881897674	6.709204304439732	CCAATTAAAA
chr6	142694471	142694472	chr6:142694472:G:T	rs182600914	G	T	G	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr6	142841887	142841888	chr6:142841888:A:G	rs6912129	A	G	A	Hoxd9_MA0913.1	3	1	+	9.51635951314298	7.688740572647875	GCAATTAAAT
chr6	142848331	142848332	chr6:142848332:A:G	rs72990282	A	G	G	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr6	142900547	142900548	chr6:142900548:T:C	rs540325593	T	C	T	Hoxd9_MA0913.1	24	0	+	0	0	.
chr6	142907441	142907442	chr6:142907442:A:G	rs9403419	A	G	G	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr6	142948371	142948372	chr6:142948372:C:T	rs1467817	C	T	C	Hoxd9_MA0913.1	0	1	-	9.51635951314298	8.568625789732518	GCAATTAAAT
chr6	143586652	143586653	chr6:143586653:T:C	rs9403514	T	C	T	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr6	143750872	143750873	chr6:143750873:T:C	rs736784	T	C	T	Hoxd9_MA0913.1	4	1	+	8.287725110553424	4.995590858778444	GTCATAAAAT
chr6	143807260	143807261	chr6:143807261:A:C	rs9376790	A	C	A	Hoxd9_MA0913.1	11	0	+	0	0	.
chr6	144543570	144543571	chr6:144543571:G:A	rs77385266	G	A	G	Hoxd9_MA0913.1	17	0	-	0	0	.
chr6	144661189	144661190	chr6:144661190:G:A	rs4896735	G	A	A	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr6	144887251	144887252	chr6:144887252:C:G	rs9403624	C	G	G	Hoxd9_MA0913.1	26	0	+	0	0	.
chr6	145070603	145070604	chr6:145070604:T:C	rs17369667	T	C	T	Hoxd9_MA0913.1	12	0	+	0	0	.
chr6	145072091	145072092	chr6:145072092:A:G	rs116888003	A	G	A	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr6	145405078	145405079	chr6:145405079:A:T	rs2328658	A	T	T	Hoxd9_MA0913.1	20	0	-	0	0	.
chr6	145823322	145823323	chr6:145823323:G:A	rs77598670	G	A	G	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr6	146594269	146594270	chr6:146594270:G:A	rs77329751	G	A	G	Hoxd9_MA0913.1	11	0	+	0	0	.
chr6	146881882	146881883	chr6:146881883:C:A	rs877660	C	A	C	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr6	146888089	146888090	chr6:146888090:T:G	rs9390437	T	G	G	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr6	146902522	146902523	chr6:146902523:G:A	rs73582235	G	A	G	Hoxd9_MA0913.1	14	0	+	0	0	.
chr6	146915502	146915503	chr6:146915503:A:G	rs73010028	A	G	A	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr6	146947140	146947141	chr6:146947141:A:G	rs7742400	A	G	A	Hoxd9_MA0913.1	3	1	+	8.853608248980283	7.025989308485178	ACAATAAAAA
chr6	147560034	147560035	chr6:147560035:A:G	rs702337	A	G	A	Hoxd9_MA0913.1	26	0	+	0	0	.
chr6	147782628	147782629	chr6:147782629:A:G	rs73789518	A	G	A	Hoxd9_MA0913.1	3	1	+	8.082713108822833	6.25509416832773	GCGATTAAAA
chr6	147875000	147875001	chr6:147875001:C:T	rs616122	C	T	C	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr6	147882752	147882753	chr6:147882753:G:A	rs12192701	G	A	A	Hoxd9_MA0913.1	0	1	+	8.635860738282448	7.688127014871988	GCCATAAAAT
chr6	148037973	148037974	chr6:148037974:G:A	rs2876677	G	A	G	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr6	148038016	148038017	chr6:148038017:C:T	rs9390531	C	T	C	Hoxd9_MA0913.1	29	0	+	0	0	.
chr6	148212424	148212425	chr6:148212425:T:C	rs76372616	T	C	T	Hoxd9_MA0913.1	25	0	-	0	0	.
chr6	148231691	148231692	chr6:148231692:T:C	rs996763960	T	C	T	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr6	148342761	148342762	chr6:148342762:C:T	rs564063079	C	T	C	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr6	148501911	148501912	chr6:148501912:G:T	rs12205031	G	T	G	Hoxd9_MA0913.1	26	0	+	0	0	.
chr6	148650234	148650235	chr6:148650235:A:G	rs6929548	A	G	G	Hoxd9_MA0913.1	8	1	+	9.760171550280933	8.187202972822991	GCAATTAAAA
chr6	148700823	148700824	chr6:148700824:G:A	rs6919117	G	A	G	Hoxd9_MA0913.1	26	0	+	0	0	.
chr6	148830348	148830349	chr6:148830349:G:A	rs9390614	G	A	G	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr6	148856420	148856421	chr6:148856421:G:A	rs73003171	G	A	G	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr6	148935302	148935303	chr6:148935303:A:G	rs17666460	A	G	A	Hoxd9_MA0913.1	10	0	+	0	0	.
chr6	149049245	149049246	chr6:149049246:T:C	rs6570926	T	C	C	Hoxd9_MA0913.1	4	1	+	8.853608248980283	5.561473997205303	ACAATAAAAA
chr6	149170684	149170685	chr6:149170685:T:G	rs79354700	T	G	T	Hoxd9_MA0913.1	4	1	+	7.973723031895638	4.681588780120659	GCAGTAAAAA
chr6	149268832	149268833	chr6:149268833:G:T	rs4897102	G	T	T	Hoxd9_MA0913.1	13	0	+	0	0	.
chr6	149485099	149485100	chr6:149485100:G:A	rs76631426	G	A	G	Hoxd9_MA0913.1	14	0	+	0	0	.
chr6	150151113	150151114	chr6:150151114:C:T	rs9885654	C	T	C	Hoxd9_MA0913.1	0	1	-	8.293678209511443	7.34594448610098	GCAATTAAAG
chr6	150436159	150436160	chr6:150436160:T:C	rs6557517	T	C	C	Hoxd9_MA0913.1	27	0	-	0	0	.
chr6	150617467	150617468	chr6:150617468:C:G	rs931488	C	G	G	Hoxd9_MA0913.1	29	0	-	0	0	.
chr6	150642388	150642389	chr6:150642389:G:A	rs981392	G	A	G	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr6	150668991	150668992	chr6:150668992:A:G	rs185172259	A	G	A	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr6	150674302	150674303	chr6:150674303:A:G	rs78827208	A	G	A	Hoxd9_MA0913.1	4	1	-	8.853608248980283	5.561473997205303	ACAATAAAAA
chr6	150674311	150674312	chr6:150674312:T:C	rs77980616	T	C	C	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr6	150723879	150723880	chr6:150723880:T:C	rs6937891	T	C	C	Hoxd9_MA0913.1	12	0	+	0	0	.
chr6	150814703	150814704	chr6:150814704:C:T	rs75273495	C	T	t	Hoxd9_MA0913.1	13	0	+	0	0	.
chr6	150933059	150933060	chr6:150933060:C:T	rs942617583	C	T	C	Hoxd9_MA0913.1	10	0	-	0	0	.
chr6	150978533	150978534	chr6:150978534:G:A	rs920562724	G	A	G	Hoxd9_MA0913.1	18	0	+	0	0	.
chr6	151002662	151002663	chr6:151002663:G:A	rs11962874	G	A	G	Hoxd9_MA0913.1	20	0	-	0	0	.
chr6	151042295	151042296	chr6:151042296:A:G	rs7765575	A	G	A	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr6	151061373	151061374	chr6:151061374:G:A	rs118103744	G	A	g	Hoxd9_MA0913.1	19	0	-	0	0	.
chr6	151070809	151070810	chr6:151070810:C:G	rs543787904	C	G	C	Hoxd9_MA0913.1	17	0	+	0	0	.
chr6	151072120	151072121	chr6:151072121:G:A	rs2346514	G	A	G	Hoxd9_MA0913.1	27	0	-	0	0	.
chr6	151076049	151076050	chr6:151076050:G:A	rs1119602	G	A	A	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr6	151257722	151257723	chr6:151257723:G:A	rs12201599	G	A	G	Hoxd9_MA0913.1	1	1	-	8.879672775420401	8.531537147691377	GCCATAAAAA
chr6	151692087	151692088	chr6:151692088:G:T	rs3020335	G	T	T	Hoxd9_MA0913.1	16	0	-	0	0	.
chr6	152095244	152095245	chr6:152095245:T:C	rs114051545	T	C	T	Hoxd9_MA0913.1	19	0	-	0	0	.
chr6	152185849	152185850	chr6:152185850:G:A	rs2763014	G	A	A	Hoxd9_MA0913.1	13	0	+	0	0	.
chr6	152273359	152273360	chr6:152273360:C:T	rs181253496	C	T	C	Hoxd9_MA0913.1	0	1	-	7.932552609785828	6.984818886375368	GCAGTTAAAA
chr6	152486055	152486056	chr6:152486056:A:G	rs4574653	A	G	G	Hoxd9_MA0913.1	29	0	+	0	0	.
chr6	152976748	152976749	chr6:152976749:G:A	rs2236013	G	A	A	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr6	153118926	153118927	chr6:153118927:T:C	rs6901126	T	C	T	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr6	153778483	153778484	chr6:153778484:T:C	rs1892361	T	C	T	Hoxd9_MA0913.1	24	0	-	0	0	.
chr6	153962581	153962582	chr6:153962582:G:A	rs17084773	G	A	G	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr6	154154617	154154618	chr6:154154618:T:C	chr6:154154618:T:C	T	C	T	Hoxd9_MA0913.1	13	0	+	0	0	.
chr6	154154619	154154620	chr6:154154620:C:G	rs958027745	C	G	C	Hoxd9_MA0913.1	15	0	+	0	0	.
chr6	154228359	154228360	chr6:154228360:C:T	rs9479793	C	T	C	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr6	154250128	154250129	chr6:154250129:G:A	rs2141289	G	A	A	Hoxd9_MA0913.1	28	0	-	0	0	.
chr6	154348493	154348494	chr6:154348494:G:A	rs2038155	G	A	A	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr6	154555465	154555466	chr6:154555466:T:C	rs116061212	T	C	T	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr6	154690357	154690358	chr6:154690358:G:A	rs11968881	G	A	A	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr6	154928454	154928455	chr6:154928455:A:C	chr6:154928455:A:C	A	C	A	Hoxd9_MA0913.1	1	1	-	9.209394307523764	6.464964922968076	GTAATAAAAT
chr6	154993253	154993254	chr6:154993254:A:G	rs55748715	A	G	G	Hoxd9_MA0913.1	27	0	+	0	0	.
chr6	154999114	154999115	chr6:154999115:A:G	rs76884902	A	G	A	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr6	155016245	155016246	chr6:155016246:A:G	rs73795819	A	G	A	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr6	155054854	155054855	chr6:155054855:T:G	rs7774757	T	G	T	Hoxd9_MA0913.1	7	1	-	8.531537147691377	5.237690395972946	GTCATAAAAA
chr6	155062975	155062976	chr6:155062976:T:G	rs73573708	T	G	T	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr6	155076427	155076428	chr6:155076428:C:T	rs57470224	C	T	C	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr6	155117227	155117228	chr6:155117228:G:A	rs73573795	G	A	G	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr6	155435432	155435433	chr6:155435433:T:C	rs231960	T	C	C	Hoxd9_MA0913.1	24	0	+	0	0	.
chr6	155829814	155829815	chr6:155829815:T:C	rs4286797	T	C	C	Hoxd9_MA0913.1	23	0	+	0	0	.
chr6	155934281	155934282	chr6:155934282:T:C	rs7740419	T	C	t	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr6	156379681	156379682	chr6:156379682:G:A	rs2819083	G	A	A	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr6	156552009	156552010	chr6:156552010:C:T	rs9480349	C	T	T	Hoxd9_MA0913.1	20	0	+	0	0	.
chr6	157022041	157022042	chr6:157022042:C:G	rs569350705	C	G	-	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr6	157144983	157144984	chr6:157144984:A:G	rs6557533	A	G	A	Hoxd9_MA0913.1	3	1	+	8.323343304007485	6.495724363512382	CCAATAAAAA
chr6	157245979	157245980	chr6:157245980:A:T	rs28712623	A	T	A	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr6	157245991	157245992	chr6:157245992:A:G	rs151032206	A	G	A	Hoxd9_MA0913.1	8	1	+	8.490366725581566	6.917398148123624	GTCATTAAAA
chr6	157417160	157417161	chr6:157417161:T:A	rs34773654	T	A	T	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr6	157434553	157434554	chr6:157434554:G:C	rs17165327	G	C	G	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr6	157561409	157561410	chr6:157561410:C:T	rs1110088	C	T	C	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr6	158011945	158011946	chr6:158011946:T:C	rs9295277	T	C	C	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr6	158257471	158257472	chr6:158257472:A:G	rs6920121	A	G	A	Hoxd9_MA0913.1	3	1	+	7.75646393805828	5.928844997563175	GCCATTAAAC
chr6	158311478	158311479	chr6:158311479:C:G	rs3828713	C	G	G	Hoxd9_MA0913.1	22	0	-	0	0	.
chr6	158311501	158311502	chr6:158311502:T:A	rs3812100	T	A	T	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr6	158635543	158635544	chr6:158635544:C:T	rs7746447	C	T	C	Hoxd9_MA0913.1	27	0	-	0	0	.
chr6	158640589	158640590	chr6:158640590:C:A	rs762696200	C	A	C	Hoxd9_MA0913.1	15	0	-	0	0	.
chr6	158674666	158674667	chr6:158674667:T:C	rs2583077	T	C	C	Hoxd9_MA0913.1	2	1	-	9.801341972390743	8.123883530932645	GCAATAAAAA
chr6	158707573	158707574	chr6:158707574:G:A	rs7754579	G	A	A	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr6	158798150	158798151	chr6:158798151:T:C	rs987005	T	C	T	Hoxd9_MA0913.1	27	0	-	0	0	.
chr6	158804657	158804658	chr6:158804658:G:C	rs3127196	G	C	C	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr6	158809711	158809712	chr6:158809712:G:T	rs3127183	G	T	T	Hoxd9_MA0913.1	23	0	+	0	0	.
chr6	158812157	158812158	chr6:158812158:G:A	rs3102965	G	A	A	Hoxd9_MA0913.1	10	0	-	0	0	.
chr6	158853963	158853964	chr6:158853964:A:G	rs114650149	A	G	A	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr6	158901293	158901294	chr6:158901294:T:C	rs7771794	T	C	C	Hoxd9_MA0913.1	25	0	+	0	0	.
chr6	158960099	158960100	chr6:158960100:G:A	rs10945583	G	A	A	Hoxd9_MA0913.1	12	0	+	0	0	.
chr6	158962599	158962600	chr6:158962600:C:T	rs77354661	C	T	C	Hoxd9_MA0913.1	29	0	+	0	0	.
chr6	159012240	159012241	chr6:159012241:A:G	rs117599227	A	G	a	Hoxd9_MA0913.1	10	0	+	0	0	.
chr6	159062744	159062745	chr6:159062745:C:T	rs35385025	C	T	C	Hoxd9_MA0913.1	28	0	-	0	0	.
chr6	159577557	159577558	chr6:159577558:C:T	rs73804860	C	T	C	Hoxd9_MA0913.1	29	0	-	0	0	.
chr6	159828335	159828336	chr6:159828336:A:G	rs11965350	A	G	G	Hoxd9_MA0913.1	21	0	-	0	0	.
chr6	159829648	159829649	chr6:159829649:T:C	rs58770277	T	C	C	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr6	160128789	160128790	chr6:160128790:G:A	rs117910272	G	A	G	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr6	160141490	160141491	chr6:160141491:A:T	rs73784003	A	T	A	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr6	160279866	160279867	chr6:160279867:T:C	rs604258	T	C	T	Hoxd9_MA0913.1	27	0	-	0	0	.
chr6	160306151	160306152	chr6:160306152:A:T	rs115624339	A	T	A	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr6	160312416	160312417	chr6:160312417:C:A	rs621069	C	A	C	Hoxd9_MA0913.1	19	0	-	0	0	.
chr6	160831652	160831653	chr6:160831653:C:A	rs765351	C	A	C	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr6	160956620	160956621	chr6:160956621:G:A	rs601415	G	A	A	Hoxd9_MA0913.1	10	0	-	0	0	.
chr6	160988354	160988355	chr6:160988355:T:C	rs602837	T	C	C	Hoxd9_MA0913.1	16	0	-	0	0	.
chr6	161038632	161038633	chr6:161038633:A:G	rs6455701	A	G	G	Hoxd9_MA0913.1	28	0	-	0	0	.
chr6	161129991	161129992	chr6:161129992:G:A	rs2293287	G	A	A	Hoxd9_MA0913.1	9	1	-	8.371167929409406	9.209394307523764	GTAATAAAAC
chr6	161145876	161145877	chr6:161145877:T:C	rs6455707	T	C	t	Hoxd9_MA0913.1	4	1	+	8.879672775420401	5.5875385236454225	GCCATAAAAA
chr6	161211620	161211621	chr6:161211621:G:A	chr6:161211621:G:A	G	A	G	Hoxd9_MA0913.1	10	0	+	0	0	.
chr6	161211629	161211630	chr6:161211630:A:T	rs4709503	A	T	T	Hoxd9_MA0913.1	19	0	+	0	0	.
chr6	161578365	161578366	chr6:161578366:C:G	rs1883875	C	G	C	Hoxd9_MA0913.1	26	0	+	0	0	.
chr6	161626828	161626829	chr6:161626829:G:C	rs1884154	G	C	G	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr6	161851025	161851026	chr6:161851026:T:A	rs9365330	T	A	T	Hoxd9_MA0913.1	7	1	-	7.984561357794846	4.6907146060764155	GCAATAAAGT
chr6	161919917	161919918	chr6:161919918:C:T	rs9365352	C	T	C	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr6	162157574	162157575	chr6:162157575:C:A	rs2849584	C	A	C	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr6	162362832	162362833	chr6:162362833:A:C	rs6925291	A	C	a	Hoxd9_MA0913.1	24	0	+	0	0	.
chr6	162615081	162615082	chr6:162615082:G:C	chr6:162615082:G:C	G	C	G	Hoxd9_MA0913.1	13	0	+	0	0	.
chr6	162724834	162724835	chr6:162724835:G:A	rs35537826	G	A	G	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr6	163146182	163146183	chr6:163146183:T:G	rs143128096	T	G	T	Hoxd9_MA0913.1	7	1	-	8.246554688443613	4.952707936725182	GTCATTAAAT
chr6	163146204	163146205	chr6:163146205:G:A	rs76739122	G	A	G	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr6	163160312	163160313	chr6:163160313:A:C	rs76489456	A	C	A	Hoxd9_MA0913.1	29	0	+	0	0	.
chr6	163176294	163176295	chr6:163176295:A:C	rs34356374	A	C	A	Hoxd9_MA0913.1	2	1	+	8.853608248980283	7.931939052009941	ACAATAAAAA
chr6	163288154	163288155	chr6:163288155:G:A	rs114276405	G	A	G	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr6	163309301	163309302	chr6:163309302:C:A	rs11757855	C	A	C	Hoxd9_MA0913.1	14	0	-	0	0	.
chr6	163383382	163383383	chr6:163383383:T:C	rs2064230	T	C	T	Hoxd9_MA0913.1	19	0	-	0	0	.
chr6	163771406	163771407	chr6:163771407:A:G	rs7741716	A	G	A	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr6	163935157	163935158	chr6:163935158:A:G	rs16895660	A	G	A	Hoxd9_MA0913.1	21	0	-	0	0	.
chr6	164564772	164564773	chr6:164564773:G:A	rs4709863	G	A	G	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr6	164698301	164698302	chr6:164698302:C:T	rs916921786	C	T	c	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr6	165627132	165627133	chr6:165627133:A:T	rs4709082	A	T	T	Hoxd9_MA0913.1	4	1	-	9.760171550280933	7.072920126094775	GCAATTAAAA
chr6	165823972	165823973	chr6:165823973:G:T	rs6920797	G	T	G	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr6	165884981	165884982	chr6:165884982:T:A	rs12528035	T	A	A	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr6	166008148	166008149	chr6:166008149:T:C	rs697482	T	C	C	Hoxd9_MA0913.1	8	1	+	8.32301137036169	7.801678332738202	GCAATAAATA
chr6	166078744	166078745	chr6:166078745:C:A	rs3127368	C	A	A	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr6	166170062	166170063	chr6:166170063:A:G	rs6928216	A	G	A	Hoxd9_MA0913.1	14	0	+	0	0	.
chr6	166474259	166474260	chr6:166474260:A:G	rs9356488	A	G	A	Hoxd9_MA0913.1	6	1	+	8.490366725581566	1.6749460578022264	GTCATTAAAA
chr6	166492360	166492361	chr6:166492361:A:G	rs3817777	A	G	G	Hoxd9_MA0913.1	10	0	+	0	0	.
chr6	166610652	166610653	chr6:166610653:T:C	rs3799577	T	C	T	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr6	166763445	166763446	chr6:166763446:T:C	rs388372	T	C	C	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr6	167158069	167158070	chr6:167158070:G:T	rs56269209	G	T	G	Hoxd9_MA0913.1	0	1	+	8.879672775420401	5.842530079467531	GCCATAAAAA
chr6	167227045	167227046	chr6:167227046:G:A	rs2094945	G	A	G	Hoxd9_MA0913.1	22	0	-	0	0	.
chr6	167260794	167260795	chr6:167260795:T:C	rs34446684	T	C	-	Hoxd9_MA0913.1	14	0	+	0	0	.
chr6	167483734	167483735	chr6:167483735:A:G	rs139185455	A	G	A	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr6	167723117	167723118	chr6:167723118:T:G	rs929143	T	G	T	Hoxd9_MA0913.1	7	1	-	9.453206344661718	6.159359592943288	GTAATAAAAA
chr6	167781528	167781529	chr6:167781529:G:A	rs584344	G	A	G	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr6	167841817	167841818	chr6:167841818:G:C	rs62427059	G	C	C	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr6	167924992	167924993	chr6:167924993:T:C	rs610670	T	C	T	Hoxd9_MA0913.1	21	0	+	0	0	.
chr6	167946371	167946372	chr6:167946372:A:T	rs3800536	A	T	a	Hoxd9_MA0913.1	18	0	+	0	0	.
chr6	167972489	167972490	chr6:167972490:G:A	rs7773728	G	A	G	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr6	168015886	168015887	chr6:168015887:G:C	rs151316545	G	C	G	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr6	168019697	168019698	chr6:168019698:T:G	rs75764477	T	G	T	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr6	168019706	168019707	chr6:168019707:C:T	rs79045090	C	T	C	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr6	168118933	168118934	chr6:168118934:T:A	rs73790776	T	A	A	Hoxd9_MA0913.1	9	1	-	9.453206344661718	9.209394307523764	GTAATAAAAA
chr6	168118937	168118938	chr6:168118938:T:G	rs73790777	T	G	G	Hoxd9_MA0913.1	5	1	-	9.453206344661718	6.018404573292349	GTAATAAAAA
chr6	168118941	168118942	chr6:168118942:A:T	rs62426317	A	T	A	Hoxd9_MA0913.1	1	1	-	9.453206344661718	7.381523596365485	GTAATAAAAA
chr6	168152513	168152514	chr6:168152514:A:C	rs12197691	A	C	A	Hoxd9_MA0913.1	17	0	-	0	0	.
chr6	168152546	168152547	chr6:168152547:C:T	rs6938319	C	T	c	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr6	168163420	168163421	chr6:168163421:C:G	rs544480435	C	G	C	Hoxd9_MA0913.1	11	0	-	0	0	.
chr6	168180114	168180115	chr6:168180115:G:A	rs72572764	G	A	G	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr6	168228127	168228128	chr6:168228128:C:T	rs2291096	C	T	C	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr6	168413711	168413712	chr6:168413712:T:A	rs2763263	T	A	T	Hoxd9_MA0913.1	10	0	-	0	0	.
chr6	168496091	168496092	chr6:168496092:C:T	rs7771799	C	T	T	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr6	168683740	168683741	chr6:168683741:A:G	rs145298705	A	G	A	Hoxd9_MA0913.1	9	1	-	8.635860738282448	7.7976343601680895	GCCATAAAAT
chr6	168908579	168908580	chr6:168908580:T:C	rs7742827	T	C	T	Hoxd9_MA0913.1	8	1	-	8.246554688443613	6.673586110985671	GTCATTAAAT
chr6	168960937	168960938	chr6:168960938:C:A	rs979292643	C	A	C	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr6	169117501	169117502	chr6:169117502:T:C	rs1322643	T	C	C	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr6	169256866	169256867	chr6:169256867:C:A	rs6942107	C	A	C	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr6	169488145	169488146	chr6:169488146:A:G	rs2860563	A	G	G	Hoxd9_MA0913.1	5	1	+	8.2283733949328	2.006710242036932	GCAATAAAGA
chr6	169700451	169700452	chr6:169700452:A:G	chr6:169700452:A:G	A	G	A	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr6	169723346	169723347	chr6:169723347:C:A	rs150588784	C	A	C	Hoxd9_MA0913.1	27	0	+	0	0	.
chr6	170248520	170248521	chr6:170248521:G:A	rs112424094	G	A	G	Hoxd9_MA0913.1	25	0	+	0	0	.
chr6	170404414	170404415	chr6:170404415:C:G	rs4710719	C	G	C	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr6	170447932	170447933	chr6:170447933:C:T	rs12190193	C	T	C	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr7	68430	68431	chr7:68431:C:A	rs189698721	C	A	c	Hoxd9_MA0913.1	0	1	-	7.801678332738202	4.764535636785332	GCAATAAACA
chr7	149717	149718	chr7:149718:A:T	rs576026589	A	T	A	Hoxd9_MA0913.1	9	1	+	8.32301137036169	8.079199333223738	GCAATAAATA
chr7	319255	319256	chr7:319256:T:A	rs140748361	T	A	T	Hoxd9_MA0913.1	9	1	-	7.801678332738202	7.557866295600249	GCAATAAACA
chr7	805456	805457	chr7:805457:G:A	rs73038184	G	A	-	Hoxd9_MA0913.1	11	0	+	0	0	.
chr7	882006	882007	chr7:882007:T:C	rs1881115	T	C	C	Hoxd9_MA0913.1	15	0	-	0	0	.
chr7	1069013	1069014	chr7:1069014:C:T	rs6956753	C	T	c	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr7	1228183	1228184	chr7:1228184:T:C	rs62435141	T	C	C	Hoxd9_MA0913.1	22	0	+	0	0	.
chr7	1507810	1507811	chr7:1507811:A:G	rs6976713	A	G	G	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr7	1681177	1681178	chr7:1681178:G:T	rs2178378	G	T	T	Hoxd9_MA0913.1	14	0	-	0	0	.
chr7	1843596	1843597	chr7:1843597:C:T	rs116982397	C	T	C	Hoxd9_MA0913.1	10	0	+	0	0	.
chr7	1858066	1858067	chr7:1858067:G:A	rs12672975	G	A	G	Hoxd9_MA0913.1	29	0	-	0	0	.
chr7	2179687	2179688	chr7:2179688:G:C	rs1637760	G	C	G	Hoxd9_MA0913.1	21	0	+	0	0	.
chr7	2237657	2237658	chr7:2237658:G:A	rs73043204	G	A	G	Hoxd9_MA0913.1	19	0	+	0	0	.
chr7	2237665	2237666	chr7:2237666:C:A	rs73043205	C	A	C	Hoxd9_MA0913.1	27	0	+	0	0	.
chr7	2621443	2621444	chr7:2621444:C:T	rs73277388	C	T	C	Hoxd9_MA0913.1	27	0	-	0	0	.
chr7	2960160	2960161	chr7:2960161:G:C	rs117768584	G	C	G	Hoxd9_MA0913.1	10	0	-	0	0	.
chr7	2993667	2993668	chr7:2993668:A:C	rs936904	A	C	C	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr7	2993668	2993669	chr7:2993669:A:G	rs936903	A	G	A	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr7	3020120	3020121	chr7:3020121:C:G	rs6461784	C	G	G	Hoxd9_MA0913.1	1	1	+	8.568625789732518	5.476060777447806	ACAATTAAAT
chr7	3037072	3037073	chr7:3037073:C:T	rs4722353	C	T	T	Hoxd9_MA0913.1	0	1	-	9.168223885413955	8.220490162003495	GTAATTAAAT
chr7	3107446	3107447	chr7:3107447:C:T	rs6943988	C	T	T	Hoxd9_MA0913.1	18	0	-	0	0	.
chr7	3151577	3151578	chr7:3151578:A:G	rs6972228	A	G	a	Hoxd9_MA0913.1	19	0	+	0	0	.
chr7	3255126	3255127	chr7:3255127:G:T	rs117490668	G	T	G	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr7	3299497	3299498	chr7:3299498:C:G	rs5006696	C	G	G	Hoxd9_MA0913.1	0	1	-	7.932552609785828	6.454553941402571	GCAGTTAAAA
chr7	3309937	3309938	chr7:3309938:A:G	rs7807563	A	G	A	Hoxd9_MA0913.1	28	0	-	0	0	.
chr7	3310934	3310935	chr7:3310935:T:C	rs4722663	T	C	T	Hoxd9_MA0913.1	26	0	-	0	0	.
chr7	3591482	3591483	chr7:3591483:T:C	rs10951255	T	C	T	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr7	3864735	3864736	chr7:3864736:G:A	rs77058641	G	A	G	Hoxd9_MA0913.1	20	0	-	0	0	.
chr7	4118727	4118728	chr7:4118728:A:G	rs57888190	A	G	A	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr7	4189265	4189266	chr7:4189266:C:T	rs16871145	C	T	C	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr7	4189266	4189267	chr7:4189267:G:A	rs1002439804	G	A	G	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr7	4273297	4273298	chr7:4273298:G:T	rs73052339	G	T	G	Hoxd9_MA0913.1	24	0	+	0	0	.
chr7	4378355	4378356	chr7:4378356:C:A	rs314623	C	A	C	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr7	4684170	4684171	chr7:4684171:C:G	rs111777581	C	G	C	Hoxd9_MA0913.1	0	1	-	8.329997507299597	6.851998838916338	GTAATTAAAC
chr7	4684622	4684623	chr7:4684623:G:C	rs114420212	G	C	G	Hoxd9_MA0913.1	20	0	+	0	0	.
chr7	5235506	5235507	chr7:5235507:C:T	rs73048065	C	T	c	Hoxd9_MA0913.1	27	0	-	0	0	.
chr7	5494566	5494567	chr7:5494567:C:A	rs10227201	C	A	A	Hoxd9_MA0913.1	20	0	+	0	0	.
chr7	5597713	5597714	chr7:5597714:A:C	chr7:5597714:A:C	A	C	A	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr7	5984319	5984320	chr7:5984320:C:T	rs11972027	C	T	.	Hoxd9_MA0913.1	21	0	+	0	0	.
chr7	5984403	5984404	chr7:5984404:G:A	rs6964944	G	A	.	Hoxd9_MA0913.1	12	0	+	0	0	.
chr7	5984406	5984407	chr7:5984407:G:T	rs11978631	G	T	.	Hoxd9_MA0913.1	15	0	+	0	0	.
chr7	6268597	6268598	chr7:6268598:C:T	rs184140666	C	T	C	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr7	6307578	6307579	chr7:6307579:G:C	rs7793329	G	C	G	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr7	6727713	6727714	chr7:6727714:T:G	rs146907763	T	G	T	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr7	6740264	6740265	chr7:6740265:A:G	rs62439738	A	G	G	Hoxd9_MA0913.1	20	0	-	0	0	.
chr7	7053680	7053681	chr7:7053681:T:C	rs16876441	T	C	T	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr7	7136861	7136862	chr7:7136862:A:C	rs17163878	A	C	A	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr7	7274721	7274722	chr7:7274722:T:A	rs1796114	T	A	A	Hoxd9_MA0913.1	1	1	+	9.209394307523764	7.13771155922753	GTAATAAAAT
chr7	7531129	7531130	chr7:7531130:A:G	rs2881889	A	G	G	Hoxd9_MA0913.1	13	0	+	0	0	.
chr7	7595532	7595533	chr7:7595533:T:C	rs17168807	T	C	T	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr7	7648194	7648195	chr7:7648195:T:G	rs1859604	T	G	G	Hoxd9_MA0913.1	7	1	-	7.943390935685037	4.649544183966605	GCAATTAAGT
chr7	7678041	7678042	chr7:7678042:A:G	rs62432576	A	G	A	Hoxd9_MA0913.1	3	1	+	7.801678332738202	5.974059392243097	GCAATAAACA
chr7	7695461	7695462	chr7:7695462:C:T	rs28912703	C	T	C	Hoxd9_MA0913.1	16	0	-	0	0	.
chr7	7857073	7857074	chr7:7857074:G:C	rs73057784	G	C	G	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr7	7890068	7890069	chr7:7890069:G:C	rs10232828	G	C	G	Hoxd9_MA0913.1	26	0	-	0	0	.
chr7	8045132	8045133	chr7:8045133:G:C	rs11981372	G	C	C	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr7	8110180	8110181	chr7:8110181:G:C	rs140763996	G	C	G	Hoxd9_MA0913.1	12	0	-	0	0	.
chr7	8190960	8190961	chr7:8190961:G:A	rs3807827	G	A	G	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr7	8295800	8295801	chr7:8295801:A:G	rs117802970	A	G	A	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr7	8354753	8354754	chr7:8354754:A:T	rs717699	A	T	A	Hoxd9_MA0913.1	20	0	+	0	0	.
chr7	8557662	8557663	chr7:8557663:T:C	rs6957390	T	C	C	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr7	8823695	8823696	chr7:8823696:G:A	rs139461269	G	A	-	Hoxd9_MA0913.1	16	0	-	0	0	.
chr7	8976020	8976021	chr7:8976021:T:C	rs16875030	T	C	T	Hoxd9_MA0913.1	1	1	+	8.490366725581566	8.838502353310592	GTCATTAAAA
chr7	9179846	9179847	chr7:9179847:T:C	rs293140	T	C	T	Hoxd9_MA0913.1	29	0	-	0	0	.
chr7	9278310	9278311	chr7:9278311:A:G	rs6968657	A	G	A	Hoxd9_MA0913.1	13	0	-	0	0	.
chr7	9974053	9974054	chr7:9974054:G:A	rs140219657	G	A	G	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr7	9974058	9974059	chr7:9974059:C:A	rs150288821	C	A	A	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr7	10136596	10136597	chr7:10136597:G:A	rs7793407	G	A	A	Hoxd9_MA0913.1	15	0	+	0	0	.
chr7	11557583	11557584	chr7:11557584:C:T	rs6460826	C	T	T	Hoxd9_MA0913.1	25	0	-	0	0	.
chr7	11557591	11557592	chr7:11557592:T:A	rs6460827	T	A	A	Hoxd9_MA0913.1	17	0	-	0	0	.
chr7	11713569	11713570	chr7:11713570:C:T	rs2355067	C	T	T	Hoxd9_MA0913.1	12	0	-	0	0	.
chr7	11713576	11713577	chr7:11713577:T:C	rs138560116	T	C	T	Hoxd9_MA0913.1	5	1	-	7.984561357794846	1.7628982048989783	GCAATAAAGT
chr7	11713578	11713579	chr7:11713579:T:C	rs10238100	T	C	T	Hoxd9_MA0913.1	3	1	-	7.984561357794846	6.156942417299742	GCAATAAAGT
chr7	11757274	11757275	chr7:11757275:T:C	rs7795628	T	C	C	Hoxd9_MA0913.1	24	0	-	0	0	.
chr7	11897068	11897069	chr7:11897069:C:T	rs2355755	C	T	T	Hoxd9_MA0913.1	17	0	+	0	0	.
chr7	12129306	12129307	chr7:12129307:T:C	rs4236267	T	C	C	Hoxd9_MA0913.1	17	0	-	0	0	.
chr7	12133940	12133941	chr7:12133941:A:T	rs11972304	A	T	T	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr7	12133945	12133946	chr7:12133946:T:C	rs11982722	T	C	C	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr7	12222944	12222945	chr7:12222945:C:T	rs1435527	C	T	C	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr7	12222960	12222961	chr7:12222961:C:G	rs6978684	C	G	C	Hoxd9_MA0913.1	1	1	+	8.60979621184233	5.517231199557616	ACAATAAAAT
chr7	12222975	12222976	chr7:12222976:T:C	rs13311466	T	C	T	Hoxd9_MA0913.1	16	0	+	0	0	.
chr7	12298729	12298730	chr7:12298730:C:T	rs6942551	C	T	C	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr7	12298766	12298767	chr7:12298767:A:G	rs6942432	A	G	A	Hoxd9_MA0913.1	25	0	+	0	0	.
chr7	12376740	12376741	chr7:12376741:C:T	rs1440024	C	T	T	Hoxd9_MA0913.1	13	0	+	0	0	.
chr7	12564246	12564247	chr7:12564247:T:C	rs79876859	T	C	T	Hoxd9_MA0913.1	18	0	+	0	0	.
chr7	12564256	12564257	chr7:12564257:C:T	rs61124922	C	T	C	Hoxd9_MA0913.1	28	0	+	0	0	.
chr7	12582206	12582207	chr7:12582207:T:G	rs6460968	T	G	G	Hoxd9_MA0913.1	26	0	-	0	0	.
chr7	12710302	12710303	chr7:12710303:A:G	rs79382371	A	G	A	Hoxd9_MA0913.1	3	1	+	8.282172881897674	6.454553941402571	CCAATTAAAA
chr7	12716061	12716062	chr7:12716062:G:T	rs187045852	G	T	G	Hoxd9_MA0913.1	27	0	-	0	0	.
chr7	12716093	12716094	chr7:12716094:C:G	rs7801894	C	G	C	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr7	12771177	12771178	chr7:12771178:C:G	rs555014479	C	G	C	Hoxd9_MA0913.1	9	1	+	8.719303557138431	8.334848631621252	GCAATAAAAC
chr7	12861746	12861747	chr7:12861747:T:A	rs61475427	T	A	T	Hoxd9_MA0913.1	21	0	-	0	0	.
chr7	12861772	12861773	chr7:12861773:A:G	rs10240689	A	G	A	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr7	12984758	12984759	chr7:12984759:C:G	rs60146115	C	G	C	Hoxd9_MA0913.1	24	0	+	0	0	.
chr7	13291524	13291525	chr7:13291525:A:C	rs2080161	A	C	A	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr7	13414585	13414586	chr7:13414586:A:T	rs919631506	A	T	A	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr7	13539661	13539662	chr7:13539662:A:G	rs10239716	A	G	A	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr7	13541394	13541395	chr7:13541395:C:A	rs10277308	C	A	A	Hoxd9_MA0913.1	1	1	+	8.282172881897674	5.862354505872416	CCAATTAAAA
chr7	13541412	13541413	chr7:13541413:A:G	rs12534739	A	G	A	Hoxd9_MA0913.1	19	0	+	0	0	.
chr7	13656273	13656274	chr7:13656274:T:A	rs4719373	T	A	A	Hoxd9_MA0913.1	13	0	+	0	0	.
chr7	13991459	13991460	chr7:13991460:T:C	rs567579751	T	C	T	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr7	14373506	14373507	chr7:14373507:C:T	rs10755842	C	T	C	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr7	14379570	14379571	chr7:14379571:G:T	rs12333379	G	T	T	Hoxd9_MA0913.1	1	1	-	8.853608248980283	6.433789872955025	ACAATAAAAA
chr7	14507567	14507568	chr7:14507568:T:C	rs577277537	T	C	T	Hoxd9_MA0913.1	9	1	-	7.973723031895638	6.507229691126146	GCAGTAAAAA
chr7	14549045	14549046	chr7:14549046:G:T	rs79233917	G	T	G	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr7	14690786	14690787	chr7:14690787:A:T	rs17668635	A	T	A	Hoxd9_MA0913.1	13	0	-	0	0	.
chr7	14724823	14724824	chr7:14724824:T:G	rs10950535	T	G	T	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr7	14760113	14760114	chr7:14760114:T:C	rs979501	T	C	T	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr7	15016271	15016272	chr7:15016272:C:G	rs1053588036	C	G	C	Hoxd9_MA0913.1	25	0	-	0	0	.
chr7	15016898	15016899	chr7:15016899:T:C	rs74950941	T	C	T	Hoxd9_MA0913.1	23	0	+	0	0	.
chr7	15502610	15502611	chr7:15502611:G:A	rs7809664	G	A	A	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr7	15652829	15652830	chr7:15652830:G:C	rs77129333	G	C	G	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr7	15755310	15755311	chr7:15755311:T:C	rs6954442	T	C	T	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr7	16023332	16023333	chr7:16023333:T:C	rs1528146	T	C	T	Hoxd9_MA0913.1	15	0	+	0	0	.
chr7	16129667	16129668	chr7:16129668:G:C	rs76836865	G	C	G	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr7	16204302	16204303	chr7:16204303:A:G	rs11761915	A	G	A	Hoxd9_MA0913.1	3	1	+	8.282172881897674	6.454553941402571	CCAATTAAAA
chr7	16234873	16234874	chr7:16234874:A:G	rs1295173	A	G	A	Hoxd9_MA0913.1	6	1	+	8.812437826870472	1.9970171590911319	ACAATTAAAA
chr7	16318689	16318690	chr7:16318690:G:A	rs984810	G	A	G	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr7	16357726	16357727	chr7:16357727:G:A	rs2178598	G	A	A	Hoxd9_MA0913.1	25	0	-	0	0	.
chr7	16627381	16627382	chr7:16627382:C:T	rs112857941	C	T	C	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr7	16678958	16678959	chr7:16678959:G:A	rs34075482	G	A	A	Hoxd9_MA0913.1	21	0	+	0	0	.
chr7	16745984	16745985	chr7:16745985:G:A	rs7803806	G	A	A	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr7	16805777	16805778	chr7:16805778:C:A	rs3757455	C	A	A	Hoxd9_MA0913.1	19	0	-	0	0	.
chr7	16967901	16967902	chr7:16967902:G:T	rs4719488	G	T	G	Hoxd9_MA0913.1	26	0	-	0	0	.
chr7	17041768	17041769	chr7:17041769:T:G	rs61359859	T	G	T	Hoxd9_MA0913.1	26	0	+	0	0	.
chr7	17048805	17048806	chr7:17048806:T:C	rs180930959	T	C	T	Hoxd9_MA0913.1	17	0	-	0	0	.
chr7	17048837	17048838	chr7:17048838:A:C	rs525277	A	C	A	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr7	17063280	17063281	chr7:17063281:G:T	rs10274310	G	T	T	Hoxd9_MA0913.1	21	0	+	0	0	.
chr7	17482010	17482011	chr7:17482011:C:T	rs4721621	C	T	T	Hoxd9_MA0913.1	28	0	+	0	0	.
chr7	17564839	17564840	chr7:17564840:A:T	rs190284082	A	T	A	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr7	17608381	17608382	chr7:17608382:C:T	rs4721636	C	T	C	Hoxd9_MA0913.1	17	0	+	0	0	.
chr7	17972128	17972129	chr7:17972129:A:T	rs12699927	A	T	A	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr7	18006085	18006086	chr7:18006086:G:T	rs10807788	G	T	T	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr7	18155275	18155276	chr7:18155276:C:G	rs9942632	C	G	G	Hoxd9_MA0913.1	16	0	+	0	0	.
chr7	18178654	18178655	chr7:18178655:C:A	rs1178344	C	A	A	Hoxd9_MA0913.1	15	0	-	0	0	.
chr7	18346114	18346115	chr7:18346115:G:A	rs644570	G	A	A	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr7	18859539	18859540	chr7:18859540:C:T	rs67248060	C	T	T	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr7	18977309	18977310	chr7:18977310:G:C	rs12533489	G	C	G	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr7	19559700	19559701	chr7:19559701:C:G	rs13246869	C	G	C	Hoxd9_MA0913.1	10	0	-	0	0	.
chr7	19681784	19681785	chr7:19681785:A:T	rs721875	A	T	T	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr7	19773111	19773112	chr7:19773112:C:G	chr7:19773112:C:G	C	G	C	Hoxd9_MA0913.1	24	0	-	0	0	.
chr7	19773135	19773136	chr7:19773136:C:A	rs114353950	C	A	C	Hoxd9_MA0913.1	0	1	-	8.719303557138431	5.682160861185562	GCAATAAAAC
chr7	20144877	20144878	chr7:20144878:A:C	rs6979361	A	C	A	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr7	20203412	20203413	chr7:20203413:A:C	rs3114473	A	C	C	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr7	20216725	20216726	chr7:20216726:A:C	rs3095007	A	C	C	Hoxd9_MA0913.1	1	1	-	8.246554688443613	5.502125303887925	GTCATTAAAT
chr7	20333791	20333792	chr7:20333792:T:A	rs11982847	T	A	T	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr7	20458684	20458685	chr7:20458685:G:A	rs73268369	G	A	G	Hoxd9_MA0913.1	22	0	+	0	0	.
chr7	20491477	20491478	chr7:20491478:C:T	rs78120636	C	T	-	Hoxd9_MA0913.1	22	0	-	0	0	.
chr7	20508388	20508389	chr7:20508389:G:A	rs148650350	G	A	G	Hoxd9_MA0913.1	0	1	+	8.371167929409406	7.423434205998946	GTAATAAAAC
chr7	20781652	20781653	chr7:20781653:A:G	rs2286260	A	G	a	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr7	20794790	20794791	chr7:20794791:C:T	rs73087577	C	T	C	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr7	21028950	21028951	chr7:21028951:G:T	rs17676896	G	T	G	Hoxd9_MA0913.1	1	1	-	8.678133135028622	6.258314759003362	GCAATTAAAC
chr7	21141400	21141401	chr7:21141401:C:T	rs61520146	C	T	C	Hoxd9_MA0913.1	22	0	-	0	0	.
chr7	21262759	21262760	chr7:21262760:G:T	rs17144187	G	T	G	Hoxd9_MA0913.1	11	0	-	0	0	.
chr7	21339674	21339675	chr7:21339675:A:G	rs7782060	A	G	A	Hoxd9_MA0913.1	19	0	-	0	0	.
chr7	21359979	21359980	chr7:21359980:T:C	rs10269436	T	C	T	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr7	21676489	21676490	chr7:21676490:G:A	rs1866672	G	A	G	Hoxd9_MA0913.1	16	0	-	0	0	.
chr7	21944971	21944972	chr7:21944972:G:T	rs10234020	G	T	.	Hoxd9_MA0913.1	25	0	-	0	0	.
chr7	21945007	21945008	chr7:21945008:G:A	chr7:21945008:G:A	G	A	.	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr7	22020215	22020216	chr7:22020216:A:G	rs6965130	A	G	A	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr7	22039979	22039980	chr7:22039980:G:A	rs1174952	G	A	G	Hoxd9_MA0913.1	17	0	+	0	0	.
chr7	22225965	22225966	chr7:22225966:A:G	rs1476689	A	G	A	Hoxd9_MA0913.1	20	0	+	0	0	.
chr7	22457425	22457426	chr7:22457426:G:A	rs73083167	G	A	G	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr7	22488948	22488949	chr7:22488949:A:G	rs17146982	A	G	A	Hoxd9_MA0913.1	8	1	+	8.879672775420401	7.306704197962459	GCCATAAAAA
chr7	22802699	22802700	chr7:22802700:A:G	rs10262258	A	G	G	Hoxd9_MA0913.1	23	0	+	0	0	.
chr7	22823255	22823256	chr7:22823256:A:C	rs148849371	A	C	A	Hoxd9_MA0913.1	16	0	-	0	0	.
chr7	22943980	22943981	chr7:22943981:T:C	rs10488277	T	C	T	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr7	23017693	23017694	chr7:23017694:G:A	rs11976658	G	A	G	Hoxd9_MA0913.1	16	0	-	0	0	.
chr7	23213827	23213828	chr7:23213828:A:T	rs534474886	A	T	A	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr7	23239148	23239149	chr7:23239149:G:A	rs6977928	G	A	G	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr7	23396217	23396218	chr7:23396218:C:A	rs12700426	C	A	C	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr7	23473276	23473277	chr7:23473277:G:C	rs4279506	G	C	C	Hoxd9_MA0913.1	24	0	-	0	0	.
chr7	23544438	23544439	chr7:23544439:A:G	rs10280508	A	G	N	Hoxd9_MA0913.1	15	0	+	0	0	.
chr7	23668657	23668658	chr7:23668658:C:G	rs7458966	C	G	C	Hoxd9_MA0913.1	16	0	-	0	0	.
chr7	23961125	23961126	chr7:23961126:T:G	rs6969677	T	G	T	Hoxd9_MA0913.1	13	0	-	0	0	.
chr7	24185219	24185220	chr7:24185220:G:C	rs156298	G	C	C	Hoxd9_MA0913.1	22	0	-	0	0	.
chr7	24409991	24409992	chr7:24409992:T:C	rs91	T	C	T	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr7	24422766	24422767	chr7:24422767:C:T	rs62450454	C	T	C	Hoxd9_MA0913.1	24	0	+	0	0	.
chr7	24725888	24725889	chr7:24725889:G:A	rs77626207	G	A	G	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr7	24796167	24796168	chr7:24796168:C:T	rs2106760	C	T	T	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr7	24824172	24824173	chr7:24824173:C:T	rs17150239	C	T	c	Hoxd9_MA0913.1	0	1	-	9.453206344661718	8.505472621251258	GTAATAAAAA
chr7	24834879	24834880	chr7:24834880:C:T	rs2285689	C	T	T	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr7	24950081	24950082	chr7:24950082:A:G	rs180724912	A	G	A	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr7	24950089	24950090	chr7:24950090:A:G	rs17150612	A	G	A	Hoxd9_MA0913.1	6	1	+	8.531537147691377	1.7161164799120368	GTCATAAAAA
chr7	24972422	24972423	chr7:24972423:A:G	rs2522237	A	G	A	Hoxd9_MA0913.1	3	1	+	8.282172881897674	6.454553941402571	CCAATTAAAA
chr7	25171484	25171485	chr7:25171485:T:C	rs13235643	T	C	T	Hoxd9_MA0913.1	21	0	-	0	0	.
chr7	25405780	25405781	chr7:25405781:A:T	rs7782780	A	T	T	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr7	25623208	25623209	chr7:25623209:T:C	rs757042	T	C	C	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr7	25670821	25670822	chr7:25670822:T:C	rs148728792	T	C	T	Hoxd9_MA0913.1	2	1	-	8.568625789732518	6.89116734827442	ACAATTAAAT
chr7	25723474	25723475	chr7:25723475:G:A	rs11769531	G	A	G	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr7	25723517	25723518	chr7:25723518:C:A	rs11769488	C	A	A	Hoxd9_MA0913.1	25	0	+	0	0	.
chr7	25842105	25842106	chr7:25842106:A:C	rs10267498	A	C	A	Hoxd9_MA0913.1	22	0	+	0	0	.
chr7	25857453	25857454	chr7:25857454:T:G	rs75468586	T	G	T	Hoxd9_MA0913.1	27	0	-	0	0	.
chr7	25857767	25857768	chr7:25857768:G:T	rs966042	G	T	G	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr7	25864318	25864319	chr7:25864319:G:A	rs147234688	G	A	G	Hoxd9_MA0913.1	14	0	+	0	0	.
chr7	25994587	25994588	chr7:25994588:G:A	rs4719845	G	A	A	Hoxd9_MA0913.1	0	1	+	9.760171550280933	8.812437826870472	GCAATTAAAA
chr7	26072261	26072262	chr7:26072262:G:A	rs17153170	G	A	G	Hoxd9_MA0913.1	19	0	-	0	0	.
chr7	26137178	26137179	chr7:26137179:T:C	rs528919896	T	C	T	Hoxd9_MA0913.1	3	1	-	8.853608248980283	7.025989308485178	ACAATAAAAA
chr7	26188156	26188157	chr7:26188157:A:C	rs10265394	A	C	c	Hoxd9_MA0913.1	12	0	+	0	0	.
chr7	26459181	26459182	chr7:26459182:C:T	rs1463249335	C	T	C	Hoxd9_MA0913.1	0	1	-	9.55752993525279	8.60979621184233	GCAATAAAAT
chr7	26805525	26805526	chr7:26805526:C:T	rs567124	C	T	C	Hoxd9_MA0913.1	27	0	+	0	0	.
chr7	26833574	26833575	chr7:26833575:G:C	rs113360640	G	C	G	Hoxd9_MA0913.1	28	0	+	0	0	.
chr7	26891585	26891586	chr7:26891586:T:A	rs12530718	T	A	T	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr7	27064834	27064835	chr7:27064835:A:G	rs74425783	A	G	A	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr7	27098936	27098937	chr7:27098937:C:A	rs187060419	C	A	C	Hoxd9_MA0913.1	1	1	+	9.801341972390743	7.381523596365485	GCAATAAAAA
chr7	27098937	27098938	chr7:27098938:A:T	rs189603965	A	T	A	Hoxd9_MA0913.1	2	1	+	9.801341972390743	3.3509979405399606	GCAATAAAAA
chr7	27111895	27111896	chr7:27111896:G:A	rs17471751	G	A	G	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr7	27119785	27119786	chr7:27119786:C:T	rs739734	C	T	c	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr7	27134549	27134550	chr7:27134550:C:G	rs180799433	C	G	C	Hoxd9_MA0913.1	29	0	+	0	0	.
chr7	27162669	27162670	chr7:27162670:A:G	rs10259620	A	G	G	Hoxd9_MA0913.1	2	1	+	8.282172881897674	6.604714440439576	CCAATTAAAA
chr7	27165728	27165729	chr7:27165729:T:C	rs759978808	T	C	T	Hoxd9_MA0913.1	23	0	-	0	0	.
chr7	27210757	27210758	chr7:27210758:A:G	rs17428012	A	G	A	Hoxd9_MA0913.1	12	0	-	0	0	.
chr7	27346998	27346999	chr7:27346999:T:C	rs11979443	T	C	T	Hoxd9_MA0913.1	3	1	-	9.801341972390743	7.973723031895638	GCAATAAAAA
chr7	27526885	27526886	chr7:27526886:G:A	rs17155443	G	A	G	Hoxd9_MA0913.1	12	0	+	0	0	.
chr7	27609001	27609002	chr7:27609002:C:A	rs41326151	C	A	C	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr7	27643251	27643252	chr7:27643252:C:T	rs13242248	C	T	C	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr7	27759634	27759635	chr7:27759635:G:T	rs11763610	G	T	G	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr7	27966368	27966369	chr7:27966369:C:A	rs12671866	C	A	C	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr7	28065477	28065478	chr7:28065478:T:G	rs116479603	T	G	T	Hoxd9_MA0913.1	10	0	-	0	0	.
chr7	28355744	28355745	chr7:28355745:A:C	chr7:28355745:A:C	A	C	A	Hoxd9_MA0913.1	19	0	-	0	0	.
chr7	28503411	28503412	chr7:28503412:A:C	rs1962615	A	C	A	Hoxd9_MA0913.1	6	1	+	9.760171550280933	5.285594687612727	GCAATTAAAA
chr7	28874094	28874095	chr7:28874095:A:G	rs6949701	A	G	G	Hoxd9_MA0913.1	23	0	-	0	0	.
chr7	28997329	28997330	chr7:28997330:C:T	rs148165888	C	T	T	Hoxd9_MA0913.1	15	0	+	0	0	.
chr7	29065078	29065079	chr7:29065079:C:G	rs678733	C	G	C	Hoxd9_MA0913.1	10	0	+	0	0	.
chr7	29502456	29502457	chr7:29502457:G:C	rs4722914	G	C	G	Hoxd9_MA0913.1	11	0	-	0	0	.
chr7	29545570	29545571	chr7:29545571:T:C	rs10244156	T	C	T	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr7	30062066	30062067	chr7:30062067:C:G	rs35889168	C	G	C	Hoxd9_MA0913.1	17	0	+	0	0	.
chr7	30101304	30101305	chr7:30101305:C:G	rs186985667	C	G	C	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr7	30176689	30176690	chr7:30176690:C:T	rs79436073	C	T	C	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr7	30176713	30176714	chr7:30176714:T:A	rs75126215	T	A	T	Hoxd9_MA0913.1	17	0	+	0	0	.
chr7	30212632	30212633	chr7:30212633:G:A	rs6979860	G	A	A	Hoxd9_MA0913.1	10	0	+	0	0	.
chr7	30301805	30301806	chr7:30301806:A:G	rs77520275	A	G	A	Hoxd9_MA0913.1	14	0	+	0	0	.
chr7	30345017	30345018	chr7:30345018:T:C	rs149503664	T	C	T	Hoxd9_MA0913.1	9	1	-	8.531537147691377	7.065043806921886	GTCATAAAAA
chr7	30428761	30428762	chr7:30428762:G:A	rs5743367	G	A	G	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr7	30687342	30687343	chr7:30687343:G:A	rs255097	G	A	G	Hoxd9_MA0913.1	20	0	-	0	0	.
chr7	31000121	31000122	chr7:31000122:G:T	rs7792595	G	T	T	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr7	31083403	31083404	chr7:31083404:C:T	rs2267731	C	T	C	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr7	31175762	31175763	chr7:31175763:G:A	rs10238794	G	A	G	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr7	31183048	31183049	chr7:31183049:A:G	rs11543666	A	G	A	Hoxd9_MA0913.1	4	1	-	8.853608248980283	5.561473997205303	ACAATAAAAA
chr7	31408672	31408673	chr7:31408673:A:G	rs77500850	A	G	A	Hoxd9_MA0913.1	3	1	+	8.568625789732518	6.741006849237415	ACAATTAAAT
chr7	31475622	31475623	chr7:31475623:G:C	rs74763357	G	C	G	Hoxd9_MA0913.1	27	0	+	0	0	.
chr7	31497790	31497791	chr7:31497791:C:G	rs6462282	C	G	G	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr7	31497799	31497800	chr7:31497800:G:A	rs977965170	G	A	G	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr7	31541011	31541012	chr7:31541012:T:C	rs10252105	T	C	C	Hoxd9_MA0913.1	7	1	-	7.973723031895638	1.1345785545412956	GCAGTAAAAA
chr7	31770247	31770248	chr7:31770248:C:T	rs28844350	C	T	T	Hoxd9_MA0913.1	13	0	-	0	0	.
chr7	32023099	32023100	chr7:32023100:C:T	rs146588821	C	T	C	Hoxd9_MA0913.1	13	0	-	0	0	.
chr7	32023768	32023769	chr7:32023769:G:A	rs7803028	G	A	G	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr7	32152983	32152984	chr7:32152984:A:G	rs6415258	A	G	A	Hoxd9_MA0913.1	15	0	-	0	0	.
chr7	32162191	32162192	chr7:32162192:T:G	rs11978519	T	G	T	Hoxd9_MA0913.1	10	0	+	0	0	.
chr7	32201764	32201765	chr7:32201765:A:G	rs4720054	A	G	G	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr7	32218182	32218183	chr7:32218183:C:T	rs117610154	C	T	C	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr7	33039401	33039402	chr7:33039402:G:C	rs4720098	G	C	G	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr7	33063690	33063691	chr7:33063691:C:T	rs6976843	C	T	C	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr7	33063692	33063693	chr7:33063693:A:C	rs34307182	A	C	A	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr7	33113649	33113650	chr7:33113650:G:A	rs10281493	G	A	A	Hoxd9_MA0913.1	1	1	-	7.932552609785828	7.584416982056805	GCAGTTAAAA
chr7	33115050	33115051	chr7:33115051:T:A	rs73307578	T	A	T	Hoxd9_MA0913.1	9	1	+	9.55752993525279	9.801341972390743	GCAATAAAAT
chr7	33195061	33195062	chr7:33195062:G:C	rs7791710	G	C	C	Hoxd9_MA0913.1	12	0	-	0	0	.
chr7	33550733	33550734	chr7:33550734:A:G	rs73109629	A	G	G	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr7	33744268	33744269	chr7:33744269:G:A	rs12534530	G	A	G	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr7	33754358	33754359	chr7:33754359:C:T	rs2111898	C	T	C	Hoxd9_MA0913.1	28	0	+	0	0	.
chr7	33806247	33806248	chr7:33806248:C:T	rs759729	C	T	C	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr7	33894280	33894281	chr7:33894281:C:T	rs7809911	C	T	T	Hoxd9_MA0913.1	0	1	-	7.801678332738202	6.853944609327742	GCAATAAACA
chr7	33916377	33916378	chr7:33916378:T:G	chr7:33916378:T:G	T	G	T	Hoxd9_MA0913.1	24	0	+	0	0	.
chr7	34573953	34573954	chr7:34573954:A:G	rs17169870	A	G	A	Hoxd9_MA0913.1	3	1	+	8.531537147691377	6.703918207196272	GTCATAAAAA
chr7	34662186	34662187	chr7:34662187:T:C	rs425990	T	C	C	Hoxd9_MA0913.1	16	0	-	0	0	.
chr7	34735902	34735903	chr7:34735903:G:A	rs324391	G	A	A	Hoxd9_MA0913.1	17	0	+	0	0	.
chr7	35332429	35332430	chr7:35332430:A:G	rs235400	A	G	G	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr7	35522154	35522155	chr7:35522155:G:A	rs73334204	G	A	G	Hoxd9_MA0913.1	0	1	+	7.7976343601680895	6.84990063675763	GCCATAAAAC
chr7	35615351	35615352	chr7:35615352:C:T	rs973092	C	T	G	Hoxd9_MA0913.1	28	0	+	0	0	.
chr7	35716912	35716913	chr7:35716913:T:G	rs1432552545	T	G	T	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr7	36013289	36013290	chr7:36013290:G:A	rs112212379	G	A	G	Hoxd9_MA0913.1	22	0	-	0	0	.
chr7	36204212	36204213	chr7:36204213:T:A	rs7807784	T	A	T	Hoxd9_MA0913.1	15	0	+	0	0	.
chr7	36215380	36215381	chr7:36215381:C:T	rs74454602	C	T	C	Hoxd9_MA0913.1	3	1	-	7.932552609785828	9.760171550280933	GCAGTTAAAA
chr7	36360046	36360047	chr7:36360047:G:A	rs2893529	G	A	G	Hoxd9_MA0913.1	0	1	+	9.453206344661718	8.505472621251258	GTAATAAAAA
chr7	36591993	36591994	chr7:36591994:C:T	rs35611190	C	T	T	Hoxd9_MA0913.1	17	0	-	0	0	.
chr7	36614631	36614632	chr7:36614632:T:C	rs2001599	T	C	C	Hoxd9_MA0913.1	4	1	+	9.51635951314298	6.224225261367999	GCAATTAAAT
chr7	36644875	36644876	chr7:36644876:T:C	rs7790204	T	C	C	Hoxd9_MA0913.1	16	0	-	0	0	.
chr7	36645083	36645084	chr7:36645084:G:A	rs11769628	G	A	G	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr7	36693794	36693795	chr7:36693795:T:C	rs55827339	T	C	.	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr7	36721343	36721344	chr7:36721344:G:C	rs7349955	G	C	C	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr7	36780757	36780758	chr7:36780758:C:T	rs10951496	C	T	C	Hoxd9_MA0913.1	28	0	+	0	0	.
chr7	37395619	37395620	chr7:37395620:G:A	rs1882074	G	A	A	Hoxd9_MA0913.1	21	0	+	0	0	.
chr7	37505168	37505169	chr7:37505169:G:T	rs12113018	G	T	G	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr7	37982110	37982111	chr7:37982111:A:C	rs118154363	A	C	A	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr7	38020835	38020836	chr7:38020836:A:G	rs7784794	A	G	A	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr7	38263518	38263519	chr7:38263519:T:C	rs2109365	T	C	-	Hoxd9_MA0913.1	11	0	-	0	0	.
chr7	38505898	38505899	chr7:38505899:A:G	rs2043787	A	G	a	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr7	38505906	38505907	chr7:38505907:A:C	rs2043788	A	C	C	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr7	38703124	38703125	chr7:38703125:A:T	rs7806860	A	T	T	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr7	39084825	39084826	chr7:39084826:G:A	rs17171532	G	A	G	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr7	39520005	39520006	chr7:39520006:A:C	chr7:39520006:A:C	A	C	A	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr7	39535901	39535902	chr7:39535902:A:G	rs73375606	A	G	G	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr7	39554843	39554844	chr7:39554844:A:C	rs78709620	A	C	A	Hoxd9_MA0913.1	17	0	-	0	0	.
chr7	39757617	39757618	chr7:39757618:A:G	chr7:39757618:A:G	A	G	.	Hoxd9_MA0913.1	11	0	-	0	0	.
chr7	40229983	40229984	chr7:40229984:G:C	rs6969419	G	C	C	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr7	40315734	40315735	chr7:40315735:T:G	rs10227273	T	G	G	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr7	40403652	40403653	chr7:40403653:C:T	rs9690724	C	T	C	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr7	40701165	40701166	chr7:40701166:C:T	rs148293224	C	T	C	Hoxd9_MA0913.1	13	0	-	0	0	.
chr7	40801972	40801973	chr7:40801973:A:G	rs1203573	A	G	G	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr7	41006226	41006227	chr7:41006227:G:T	rs11980516	G	T	T	Hoxd9_MA0913.1	10	0	-	0	0	.
chr7	41328001	41328002	chr7:41328002:G:A	rs73312417	G	A	G	Hoxd9_MA0913.1	0	1	+	9.55752993525279	8.60979621184233	GCAATAAAAT
chr7	41351080	41351081	chr7:41351081:C:A	rs10279659	C	A	C	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr7	41559731	41559732	chr7:41559732:T:A	rs73323904	T	A	T	Hoxd9_MA0913.1	9	1	-	8.531537147691377	8.287725110553424	GTCATAAAAA
chr7	41779933	41779934	chr7:41779934:A:G	rs148153304	A	G	A	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr7	41875449	41875450	chr7:41875450:C:G	rs17639311	C	G	C	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr7	41975940	41975941	chr7:41975941:A:T	rs80225546	A	T	A	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr7	41991193	41991194	chr7:41991194:C:T	rs149514030	C	T	C	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr7	41996694	41996695	chr7:41996695:A:G	rs62441525	A	G	A	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr7	41997011	41997012	chr7:41997012:T:C	rs182994866	T	C	T	Hoxd9_MA0913.1	24	0	+	0	0	.
chr7	42151972	42151973	chr7:42151973:C:T	rs3801205	C	T	C	Hoxd9_MA0913.1	27	0	+	0	0	.
chr7	42151973	42151974	chr7:42151974:G:A	rs7784573	G	A	G	Hoxd9_MA0913.1	28	0	+	0	0	.
chr7	42181705	42181706	chr7:42181706:G:A	rs3779173	G	A	A	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr7	42230789	42230790	chr7:42230790:G:C	rs117461098	G	C	G	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr7	42456689	42456690	chr7:42456690:C:T	rs76122196	C	T	C	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr7	42456717	42456718	chr7:42456718:G:A	rs1465682	G	A	A	Hoxd9_MA0913.1	21	0	+	0	0	.
chr7	42930933	42930934	chr7:42930934:T:C	rs145533379	T	C	T	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr7	42949746	42949747	chr7:42949747:A:T	rs610629	A	T	T	Hoxd9_MA0913.1	13	0	+	0	0	.
chr7	43139074	43139075	chr7:43139075:G:T	rs73690258	G	T	G	Hoxd9_MA0913.1	0	1	-	8.282172881897674	8.812437826870472	CCAATTAAAA
chr7	43376379	43376380	chr7:43376380:G:C	rs71540530	G	C	G	Hoxd9_MA0913.1	22	0	+	0	0	.
chr7	43422329	43422330	chr7:43422330:T:A	rs867876419	T	A	T	Hoxd9_MA0913.1	22	0	-	0	0	.
chr7	43422332	43422333	chr7:43422333:A:G	rs12666458	A	G	A	Hoxd9_MA0913.1	19	0	-	0	0	.
chr7	43464228	43464229	chr7:43464229:A:G	rs61696472	A	G	A	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr7	43559888	43559889	chr7:43559889:C:T	rs12702051	C	T	C	Hoxd9_MA0913.1	10	0	+	0	0	.
chr7	43585620	43585621	chr7:43585621:G:A	rs1312413175	G	A	G	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr7	43587141	43587142	chr7:43587142:T:C	rs35564694	T	C	T	Hoxd9_MA0913.1	6	1	-	8.853608248980283	2.0381875812009422	ACAATAAAAA
chr7	43591943	43591944	chr7:43591944:T:A	chr7:43591944:T:A	T	A	T	Hoxd9_MA0913.1	5	1	-	7.984561357794846	7.943390935685037	GCAATAAAGT
chr7	43641536	43641537	chr7:43641537:C:T	rs4724238	C	T	T	Hoxd9_MA0913.1	1	1	+	8.60979621184233	8.261660584113304	ACAATAAAAT
chr7	43649022	43649023	chr7:43649023:G:A	rs2214995	G	A	A	Hoxd9_MA0913.1	16	0	+	0	0	.
chr7	43652058	43652059	chr7:43652059:C:T	rs1859875	C	T	C	Hoxd9_MA0913.1	22	0	+	0	0	.
chr7	43710949	43710950	chr7:43710950:A:G	rs10225076	A	G	G	Hoxd9_MA0913.1	26	0	+	0	0	.
chr7	44051463	44051464	chr7:44051464:A:C	rs17449252	A	C	A	Hoxd9_MA0913.1	7	1	+	8.60979621184233	5.315949460123898	ACAATAAAAT
chr7	44224073	44224074	chr7:44224074:G:A	rs62459093	G	A	G	Hoxd9_MA0913.1	11	0	+	0	0	.
chr7	44369213	44369214	chr7:44369214:T:G	rs10233353	T	G	T	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr7	44640177	44640178	chr7:44640178:C:T	rs890163400	C	T	C	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr7	44795964	44795965	chr7:44795965:C:T	rs942082783	C	T	C	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr7	44849908	44849909	chr7:44849909:G:A	rs3757569	G	A	G	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr7	44990569	44990570	chr7:44990570:T:C	rs112520737	T	C	T	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr7	45035883	45035884	chr7:45035884:C:G	rs1294969	C	G	C	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr7	45035916	45035917	chr7:45035917:A:G	rs10237248	A	G	A	Hoxd9_MA0913.1	20	0	+	0	0	.
chr7	45677636	45677637	chr7:45677637:A:C	rs77043744	A	C	A	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr7	45896091	45896092	chr7:45896092:A:C	rs10234425	A	C	C	Hoxd9_MA0913.1	6	1	+	9.801341972390743	5.326765109722537	GCAATAAAAA
chr7	46022685	46022686	chr7:46022686:C:T	rs13244568	C	T	C	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr7	46534813	46534814	chr7:46534814:G:C	rs78697847	G	C	g	Hoxd9_MA0913.1	13	0	-	0	0	.
chr7	46742409	46742410	chr7:46742410:G:A	rs977842919	G	A	G	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr7	46865252	46865253	chr7:46865253:G:A	rs112958934	G	A	G	Hoxd9_MA0913.1	26	0	+	0	0	.
chr7	46934855	46934856	chr7:46934856:T:G	rs118147395	T	G	T	Hoxd9_MA0913.1	28	0	-	0	0	.
chr7	46970117	46970118	chr7:46970118:A:G	rs77821503	A	G	A	Hoxd9_MA0913.1	1	1	-	9.412035922551908	9.760171550280933	GTAATTAAAA
chr7	47039243	47039244	chr7:47039244:C:T	rs564346944	C	T	C	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr7	47154110	47154111	chr7:47154111:G:A	rs10499657	G	A	G	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr7	47181327	47181328	chr7:47181328:C:A	rs112482926	C	A	C	Hoxd9_MA0913.1	24	0	+	0	0	.
chr7	47283555	47283556	chr7:47283556:A:G	rs3829000	A	G	G	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr7	47350860	47350861	chr7:47350861:G:C	rs139397552	G	C	G	Hoxd9_MA0913.1	22	0	+	0	0	.
chr7	47374573	47374574	chr7:47374574:A:C	rs2470991	A	C	C	Hoxd9_MA0913.1	17	0	+	0	0	.
chr7	47489174	47489175	chr7:47489175:G:A	rs11975150	G	A	G	Hoxd9_MA0913.1	0	1	+	8.678133135028622	7.73039941161816	GCAATTAAAC
chr7	47489197	47489198	chr7:47489198:G:A	rs186609986	G	A	G	Hoxd9_MA0913.1	23	0	+	0	0	.
chr7	47539800	47539801	chr7:47539801:A:G	rs13222792	A	G	A	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr7	47586798	47586799	chr7:47586799:A:T	rs7798316	A	T	T	Hoxd9_MA0913.1	11	0	+	0	0	.
chr7	47776804	47776805	chr7:47776805:C:A	rs4339543	C	A	A	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr7	47806769	47806770	chr7:47806770:T:C	rs75886999	T	C	T	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr7	47935410	47935411	chr7:47935411:G:A	rs79266901	G	A	G	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr7	47940612	47940613	chr7:47940613:G:C	rs138173041	G	C	G	Hoxd9_MA0913.1	0	1	+	8.287725110553424	6.809726442170165	GTCATAAAAT
chr7	48128546	48128547	chr7:48128547:C:T	rs6962799	C	T	C	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr7	48177846	48177847	chr7:48177847:T:A	rs144841321	T	A	T	Hoxd9_MA0913.1	25	0	+	0	0	.
chr7	48193279	48193280	chr7:48193280:A:G	rs143298995	A	G	A	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr7	48259550	48259551	chr7:48259551:A:G	rs60913257	A	G	A	Hoxd9_MA0913.1	25	0	-	0	0	.
chr7	48816180	48816181	chr7:48816181:G:T	rs17331120	G	T	T	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr7	49028299	49028300	chr7:49028300:C:T	rs6951625	C	T	-	Hoxd9_MA0913.1	23	0	+	0	0	.
chr7	49176395	49176396	chr7:49176396:C:A	rs78373851	C	A	C	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr7	49466651	49466652	chr7:49466652:T:C	rs4917060	T	C	C	Hoxd9_MA0913.1	15	0	-	0	0	.
chr7	49705317	49705318	chr7:49705318:C:G	rs10273627	C	G	C	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr7	49840383	49840384	chr7:49840384:C:T	rs141432049	C	T	C	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr7	50144447	50144448	chr7:50144448:A:G	rs55638419	A	G	A	Hoxd9_MA0913.1	16	0	-	0	0	.
chr7	50151619	50151620	chr7:50151620:G:T	rs10260654	G	T	T	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr7	50227002	50227003	chr7:50227003:C:G	rs62445346	C	G	C	Hoxd9_MA0913.1	10	0	-	0	0	.
chr7	50367918	50367919	chr7:50367919:A:T	rs11766800	A	T	T	Hoxd9_MA0913.1	20	0	+	0	0	.
chr7	50405552	50405553	chr7:50405553:A:G	rs6964969	A	G	A	Hoxd9_MA0913.1	3	1	+	7.75646393805828	5.928844997563175	GCCATTAAAC
chr7	50529928	50529929	chr7:50529929:A:G	rs1982406	A	G	A	Hoxd9_MA0913.1	7	1	+	9.412035922551908	2.572891445197565	GTAATTAAAA
chr7	50580486	50580487	chr7:50580487:G:A	rs10238413	G	A	g	Hoxd9_MA0913.1	22	0	-	0	0	.
chr7	50635858	50635859	chr7:50635859:T:C	rs2158919	T	C	T	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr7	50781226	50781227	chr7:50781227:C:T	rs6593180	C	T	C	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr7	50792415	50792416	chr7:50792416:C:T	chr7:50792416:C:T	C	T	C	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr7	50839205	50839206	chr7:50839206:T:G	rs7357209	T	G	G	Hoxd9_MA0913.1	9	1	+	8.60979621184233	7.387114908210791	ACAATAAAAT
chr7	51255200	51255201	chr7:51255201:G:T	rs76303408	G	T	G	Hoxd9_MA0913.1	13	0	+	0	0	.
chr7	51607141	51607142	chr7:51607142:A:G	rs1860466	A	G	A	Hoxd9_MA0913.1	9	1	-	9.209394307523764	8.371167929409406	GTAATAAAAT
chr7	51680862	51680863	chr7:51680863:G:A	rs145031492	G	A	G	Hoxd9_MA0913.1	16	0	-	0	0	.
chr7	51681114	51681115	chr7:51681115:T:C	rs6969619	T	C	T	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr7	51951267	51951268	chr7:51951268:C:T	rs139267375	C	T	C	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr7	51982833	51982834	chr7:51982834:C:T	rs1249988623	C	T	C	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr7	51982878	51982879	chr7:51982879:C:G	rs4947669	C	G	G	Hoxd9_MA0913.1	27	0	+	0	0	.
chr7	52149444	52149445	chr7:52149445:T:C	rs6951196	T	C	T	Hoxd9_MA0913.1	25	0	+	0	0	.
chr7	52393146	52393147	chr7:52393147:T:G	rs12718630	T	G	G	Hoxd9_MA0913.1	1	1	+	9.453206344661718	6.7087769601060305	GTAATAAAAA
chr7	52393170	52393171	chr7:52393171:G:C	rs62443870	G	C	G	Hoxd9_MA0913.1	25	0	+	0	0	.
chr7	52449163	52449164	chr7:52449164:A:G	rs7810180	A	G	G	Hoxd9_MA0913.1	28	0	-	0	0	.
chr7	52501533	52501534	chr7:52501534:T:G	rs10259927	T	G	.	Hoxd9_MA0913.1	5	1	-	8.2283733949328	4.79357162356343	GCAATAAAGA
chr7	52761863	52761864	chr7:52761864:T:C	rs17135295	T	C	T	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr7	52959391	52959392	chr7:52959392:G:A	rs36066816	G	A	G	Hoxd9_MA0913.1	16	0	-	0	0	.
chr7	53398504	53398505	chr7:53398505:T:C	rs73363610	T	C	T	Hoxd9_MA0913.1	27	0	-	0	0	.
chr7	53672617	53672618	chr7:53672618:G:A	rs117291540	G	A	G	Hoxd9_MA0913.1	13	0	+	0	0	.
chr7	53816754	53816755	chr7:53816755:T:G	rs1919802	T	G	t	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr7	53996989	53996990	chr7:53996990:G:T	rs77988485	G	T	T	Hoxd9_MA0913.1	1	1	-	8.853608248980283	6.433789872955025	ACAATAAAAA
chr7	53997010	53997011	chr7:53997011:G:A	rs6969700	G	A	G	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr7	54146070	54146071	chr7:54146071:G:A	rs2330676	G	A	G	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr7	54474025	54474026	chr7:54474026:C:T	rs7802774	C	T	C	Hoxd9_MA0913.1	22	0	+	0	0	.
chr7	54480922	54480923	chr7:54480923:G:T	rs73401602	G	T	G	Hoxd9_MA0913.1	8	1	+	7.984561357794846	8.079199333223738	GCAATAAAGT
chr7	54573723	54573724	chr7:54573724:C:G	rs639267	C	G	G	Hoxd9_MA0913.1	2	1	+	8.287725110553424	7.531935866065666	GTCATAAAAT
chr7	54799111	54799112	chr7:54799112:A:G	rs2709317	A	G	G	Hoxd9_MA0913.1	29	0	+	0	0	.
chr7	55020699	55020700	chr7:55020700:T:C	rs1344237715	T	C	T	Hoxd9_MA0913.1	16	0	-	0	0	.
chr7	55020721	55020722	chr7:55020722:T:C	rs4947963	T	C	T	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr7	55125602	55125603	chr7:55125603:G:A	rs184368732	G	A	G	Hoxd9_MA0913.1	15	0	+	0	0	.
chr7	55164552	55164553	chr7:55164553:T:C	rs11977388	T	C	C	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr7	55252710	55252711	chr7:55252711:T:A	rs116591540	T	A	T	Hoxd9_MA0913.1	7	1	-	8.853608248980283	5.559761497261851	ACAATAAAAA
chr7	55252721	55252722	chr7:55252722:A:G	rs10241882	A	G	A	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr7	55410619	55410620	chr7:55410620:C:G	rs4948025	C	G	C	Hoxd9_MA0913.1	23	0	+	0	0	.
chr7	55550209	55550210	chr7:55550210:C:T	rs117532590	C	T	C	Hoxd9_MA0913.1	11	0	+	0	0	.
chr7	56023731	56023732	chr7:56023732:A:C	rs115725511	A	C	A	Hoxd9_MA0913.1	28	0	+	0	0	.
chr7	56235899	56235900	chr7:56235900:A:C	rs12531489	A	C	C	Hoxd9_MA0913.1	25	0	+	0	0	.
chr7	56961830	56961831	chr7:56961831:T:A	rs62462390	T	A	T	Hoxd9_MA0913.1	20	0	-	0	0	.
chr7	57013196	57013197	chr7:57013197:T:C	rs62463105	T	C	T	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr7	57013197	57013198	chr7:57013198:G:A	rs62463106	G	A	G	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr7	57505225	57505226	chr7:57505226:G:A	rs10081282	G	A	.	Hoxd9_MA0913.1	13	0	+	0	0	.
chr7	62276710	62276711	chr7:62276711:G:T	rs1197364879	G	T	.	Hoxd9_MA0913.1	21	0	+	0	0	.
chr7	62376576	62376577	chr7:62376577:A:T	rs879020275	A	T	.	Hoxd9_MA0913.1	23	0	-	0	0	.
chr7	63068586	63068587	chr7:63068587:C:G	rs897755476	C	G	C	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr7	64315485	64315486	chr7:64315486:C:T	rs73133695	C	T	C	Hoxd9_MA0913.1	10	0	-	0	0	.
chr7	64665034	64665035	chr7:64665035:C:T	rs4718096	C	T	c	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr7	64853917	64853918	chr7:64853918:G:A	rs2863984	G	A	-	Hoxd9_MA0913.1	22	0	+	0	0	.
chr7	65260366	65260367	chr7:65260367:G:A	rs183710913	G	A	G	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr7	65449682	65449683	chr7:65449683:T:G	rs6972850	T	G	N	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr7	65449700	65449701	chr7:65449701:A:T	rs547729287	A	T	a	Hoxd9_MA0913.1	13	0	+	0	0	.
chr7	65802033	65802034	chr7:65802034:G:A	rs73701016	G	A	.	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr7	65927761	65927762	chr7:65927762:A:G	rs571171143	A	G	.	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr7	66009858	66009859	chr7:66009859:T:C	rs2462569	T	C	.	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr7	66253729	66253730	chr7:66253730:G:A	rs6964245	G	A	A	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr7	66554202	66554203	chr7:66554203:G:A	rs13536	G	A	N	Hoxd9_MA0913.1	20	0	+	0	0	.
chr7	67041249	67041250	chr7:67041250:T:A	rs10271374	T	A	A	Hoxd9_MA0913.1	16	0	-	0	0	.
chr7	67350593	67350594	chr7:67350594:G:A	rs56325879	G	A	g	Hoxd9_MA0913.1	25	0	+	0	0	.
chr7	67485830	67485831	chr7:67485831:G:A	rs6953207	G	A	G	Hoxd9_MA0913.1	1	1	-	8.838502353310592	8.490366725581566	GCCATTAAAA
chr7	67774301	67774302	chr7:67774302:T:A	rs73139485	T	A	T	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr7	67774308	67774309	chr7:67774309:G:A	rs6953246	G	A	A	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr7	68665119	68665120	chr7:68665120:T:G	chr7:68665120:T:G	T	G	T	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr7	69023966	69023967	chr7:69023967:C:T	rs2200436	C	T	C	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr7	69425334	69425335	chr7:69425335:T:G	rs10085629	T	G	G	Hoxd9_MA0913.1	26	0	-	0	0	.
chr7	69569896	69569897	chr7:69569897:G:T	rs7797529	G	T	G	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr7	69577733	69577734	chr7:69577734:T:A	rs10268457	T	A	A	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr7	69577737	69577738	chr7:69577738:G:A	rs2865116	G	A	G	Hoxd9_MA0913.1	2	1	+	8.123883530932645	9.801341972390743	GCGATAAAAA
chr7	69644279	69644280	chr7:69644280:A:G	rs2533440	A	G	G	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr7	69719987	69719988	chr7:69719988:G:A	rs74455112	G	A	G	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr7	70044284	70044285	chr7:70044285:A:G	rs6970670	A	G	A	Hoxd9_MA0913.1	1	1	-	9.209394307523764	9.55752993525279	GTAATAAAAT
chr7	70373008	70373009	chr7:70373009:A:G	rs11763292	A	G	G	Hoxd9_MA0913.1	26	0	-	0	0	.
chr7	70470883	70470884	chr7:70470884:T:C	rs12670172	T	C	T	Hoxd9_MA0913.1	19	0	+	0	0	.
chr7	70630806	70630807	chr7:70630807:A:G	rs74915254	A	G	A	Hoxd9_MA0913.1	24	0	-	0	0	.
chr7	70728203	70728204	chr7:70728204:A:T	rs12533769	A	T	A	Hoxd9_MA0913.1	18	0	-	0	0	.
chr7	71153901	71153902	chr7:71153902:T:C	rs6460641	T	C	C	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr7	71286121	71286122	chr7:71286122:G:T	rs7796585	G	T	T	Hoxd9_MA0913.1	17	0	+	0	0	.
chr7	71303730	71303731	chr7:71303731:T:A	rs3923569	T	A	T	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr7	71453543	71453544	chr7:71453544:T:C	rs79621326	T	C	T	Hoxd9_MA0913.1	19	0	-	0	0	.
chr7	71457796	71457797	chr7:71457797:C:G	rs61080489	C	G	C	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr7	71511407	71511408	chr7:71511408:A:G	rs6955186	A	G	A	Hoxd9_MA0913.1	9	1	-	9.55752993525279	8.719303557138431	GCAATAAAAT
chr7	71536058	71536059	chr7:71536059:C:T	rs62459931	C	T	C	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr7	71688333	71688334	chr7:71688334:C:A	rs4719166	C	A	A	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr7	71688337	71688338	chr7:71688338:C:G	rs73191019	C	G	C	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr7	71729068	71729069	chr7:71729069:G:A	rs145737750	G	A	G	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr7	71729440	71729441	chr7:71729441:C:G	rs35830077	C	G	C	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr7	72349983	72349984	chr7:72349984:T:C	rs2968513	T	C	T	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr7	72366949	72366950	chr7:72366950:T:C	rs2944799	T	C	t	Hoxd9_MA0913.1	17	0	+	0	0	.
chr7	72444350	72444351	chr7:72444351:A:G	rs10434961	A	G	A	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr7	73358168	73358169	chr7:73358169:T:G	chr7:73358169:T:G	T	G	T	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr7	73809810	73809811	chr7:73809811:G:A	rs1310549356	G	A	G	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr7	73809823	73809824	chr7:73809824:G:A	rs142348291	G	A	G	Hoxd9_MA0913.1	0	1	+	8.879672775420401	7.931939052009941	GCCATAAAAA
chr7	73828293	73828294	chr7:73828294:G:A	chr7:73828294:G:A	G	A	G	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr7	75418961	75418962	chr7:75418962:C:T	rs113561610	C	T	C	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr7	75531991	75531992	chr7:75531992:T:A	rs809439	T	A	.	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr7	75670130	75670131	chr7:75670131:A:G	rs28885721	A	G	a	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr7	75761880	75761881	chr7:75761881:T:A	rs10280471	T	A	T	Hoxd9_MA0913.1	15	0	-	0	0	.
chr7	75771354	75771355	chr7:75771355:G:T	rs10275464	G	T	G	Hoxd9_MA0913.1	1	1	-	8.568625789732518	6.14880741370726	ACAATTAAAT
chr7	76606283	76606284	chr7:76606284:A:G	rs113281468	A	G	a	Hoxd9_MA0913.1	23	0	-	0	0	.
chr7	76821999	76822000	chr7:76822000:A:G	rs2538406	A	G	G	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr7	77426111	77426112	chr7:77426112:T:C	rs2868783	T	C	C	Hoxd9_MA0913.1	3	1	-	8.60979621184233	6.782177271347225	ACAATAAAAT
chr7	77593947	77593948	chr7:77593948:T:C	rs4729548	T	C	T	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr7	77644961	77644962	chr7:77644962:G:A	rs76816841	G	A	G	Hoxd9_MA0913.1	0	1	+	9.209394307523764	8.261660584113304	GTAATAAAAT
chr7	77731533	77731534	chr7:77731534:C:T	rs116372379	C	T	c	Hoxd9_MA0913.1	19	0	-	0	0	.
chr7	77798623	77798624	chr7:77798624:A:G	rs931009638	A	G	A	Hoxd9_MA0913.1	15	0	+	0	0	.
chr7	78139221	78139222	chr7:78139222:C:T	rs3779294	C	T	C	Hoxd9_MA0913.1	13	0	-	0	0	.
chr7	78164746	78164747	chr7:78164747:C:T	rs1404395	C	T	C	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr7	78379847	78379848	chr7:78379848:C:T	rs1029819	C	T	T	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr7	78489424	78489425	chr7:78489425:A:G	rs759335	A	G	A	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr7	78855703	78855704	chr7:78855704:G:A	rs1207824	G	A	G	Hoxd9_MA0913.1	0	1	+	7.801678332738202	6.853944609327742	GCAATAAACA
chr7	79308460	79308461	chr7:79308461:C:T	rs375096870	C	T	C	Hoxd9_MA0913.1	17	0	+	0	0	.
chr7	79308461	79308462	chr7:79308462:T:G	rs577230641	T	G	T	Hoxd9_MA0913.1	18	0	+	0	0	.
chr7	79319313	79319314	chr7:79319314:T:A	rs17152257	T	A	T	Hoxd9_MA0913.1	19	0	+	0	0	.
chr7	79638411	79638412	chr7:79638412:G:A	rs6954862	G	A	A	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr7	79876799	79876800	chr7:79876800:T:G	rs73368692	T	G	G	Hoxd9_MA0913.1	23	0	+	0	0	.
chr7	80140712	80140713	chr7:80140713:G:A	rs75364557	G	A	g	Hoxd9_MA0913.1	13	0	+	0	0	.
chr7	80212637	80212638	chr7:80212638:A:G	rs10238438	A	G	A	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr7	80257954	80257955	chr7:80257955:G:A	rs306699	G	A	A	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr7	80357876	80357877	chr7:80357877:A:G	rs304756	A	G	G	Hoxd9_MA0913.1	5	1	+	8.853608248980283	2.631945096084414	ACAATAAAAA
chr7	80563908	80563909	chr7:80563909:G:C	rs79764518	G	C	G	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr7	80563917	80563918	chr7:80563918:T:C	rs553973174	T	C	T	Hoxd9_MA0913.1	4	1	+	8.293678209511443	5.001543957736461	GCAATTAAAG
chr7	80563942	80563943	chr7:80563943:C:T	rs60451642	C	T	C	Hoxd9_MA0913.1	29	0	+	0	0	.
chr7	80633608	80633609	chr7:80633609:A:G	rs889531925	A	G	A	Hoxd9_MA0913.1	4	1	-	9.453206344661718	6.161072092886739	GTAATAAAAA
chr7	80677033	80677034	chr7:80677034:C:G	rs1049673	C	G	G	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr7	80833587	80833588	chr7:80833588:G:A	rs929346	G	A	G	Hoxd9_MA0913.1	29	0	-	0	0	.
chr7	80877125	80877126	chr7:80877126:G:A	rs114731498	G	A	A	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr7	80877166	80877167	chr7:80877167:A:T	rs115613729	A	T	A	Hoxd9_MA0913.1	24	0	+	0	0	.
chr7	80881088	80881089	chr7:80881089:C:T	rs11980380	C	T	C	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr7	81013346	81013347	chr7:81013347:A:G	rs148899026	A	G	A	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr7	81236836	81236837	chr7:81236837:T:G	rs2158376	T	G	G	Hoxd9_MA0913.1	12	0	+	0	0	.
chr7	81333281	81333282	chr7:81333282:A:C	rs1014079	A	C	A	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr7	81701546	81701547	chr7:81701547:C:T	rs5745773	C	T	C	Hoxd9_MA0913.1	24	0	-	0	0	.
chr7	81736472	81736473	chr7:81736473:A:G	rs12671260	A	G	A	Hoxd9_MA0913.1	9	1	-	8.60979621184233	7.7715698337279715	ACAATAAAAT
chr7	81861063	81861064	chr7:81861064:G:A	rs10269863	G	A	G	Hoxd9_MA0913.1	26	0	-	0	0	.
chr7	81887503	81887504	chr7:81887504:T:C	rs9986811	T	C	C	Hoxd9_MA0913.1	11	0	-	0	0	.
chr7	81962399	81962400	chr7:81962400:T:G	rs1229503	T	G	T	Hoxd9_MA0913.1	6	1	-	8.853608248980283	4.379031386312077	ACAATAAAAA
chr7	82049603	82049604	chr7:82049604:A:G	rs143143020	A	G	A	Hoxd9_MA0913.1	5	1	+	8.123883530932645	1.902220378036776	GCGATAAAAA
chr7	82098865	82098866	chr7:82098866:T:A	rs258666	T	A	A	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr7	82265218	82265219	chr7:82265219:A:G	rs190452304	A	G	A	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr7	82318631	82318632	chr7:82318632:T:A	rs73164281	T	A	T	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr7	82318635	82318636	chr7:82318636:T:C	rs10273592	T	C	T	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr7	82375807	82375808	chr7:82375808:C:G	rs2190237	C	G	G	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr7	82438067	82438068	chr7:82438068:C:T	rs79837401	C	T	C	Hoxd9_MA0913.1	0	1	-	9.412035922551908	8.464302199141448	GTAATTAAAA
chr7	82481860	82481861	chr7:82481861:A:G	rs73374439	A	G	A	Hoxd9_MA0913.1	27	0	-	0	0	.
chr7	82544524	82544525	chr7:82544525:G:A	rs75651940	G	A	G	Hoxd9_MA0913.1	28	0	+	0	0	.
chr7	83323136	83323137	chr7:83323137:A:G	rs6947059	A	G	A	Hoxd9_MA0913.1	9	1	+	7.973723031895638	6.507229691126146	GCAGTAAAAA
chr7	83413778	83413779	chr7:83413779:A:G	rs117561607	A	G	A	Hoxd9_MA0913.1	11	0	+	0	0	.
chr7	83468802	83468803	chr7:83468803:A:G	rs2723012	A	G	A	Hoxd9_MA0913.1	29	0	-	0	0	.
chr7	83546794	83546795	chr7:83546795:C:T	rs1353614	C	T	C	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr7	83546805	83546806	chr7:83546806:A:G	rs1024701	A	G	A	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr7	83575647	83575648	chr7:83575648:T:C	rs215289	T	C	C	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr7	83579864	83579865	chr7:83579865:T:C	rs183345	T	C	C	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr7	83588795	83588796	chr7:83588796:A:G	rs215308	A	G	G	Hoxd9_MA0913.1	22	0	+	0	0	.
chr7	83599476	83599477	chr7:83599477:A:C	rs10246409	A	C	A	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr7	83878843	83878844	chr7:83878844:A:C	rs115788371	A	C	A	Hoxd9_MA0913.1	3	1	+	8.287725110553424	3.821494440153368	GTCATAAAAT
chr7	83878848	83878849	chr7:83878849:A:G	rs74991696	A	G	A	Hoxd9_MA0913.1	8	1	+	8.287725110553424	6.714756533095481	GTCATAAAAT
chr7	84043956	84043957	chr7:84043957:T:C	rs77234957	T	C	T	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr7	84207840	84207841	chr7:84207841:C:A	rs13230138	C	A	C	Hoxd9_MA0913.1	14	0	+	0	0	.
chr7	84365082	84365083	chr7:84365083:A:C	rs7808081	A	C	C	Hoxd9_MA0913.1	16	0	+	0	0	.
chr7	84746932	84746933	chr7:84746933:T:C	rs75012384	T	C	T	Hoxd9_MA0913.1	3	1	-	8.32301137036169	6.4953924298665875	GCAATAAATA
chr7	85336476	85336477	chr7:85336477:A:T	rs2696173	A	T	A	Hoxd9_MA0913.1	29	0	-	0	0	.
chr7	85664491	85664492	chr7:85664492:G:T	rs7794522	G	T	T	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr7	85664494	85664495	chr7:85664495:T:C	rs7777378	T	C	C	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr7	85720537	85720538	chr7:85720538:G:T	rs76266860	G	T	g	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr7	86126990	86126991	chr7:86126991:C:T	rs13310027	C	T	C	Hoxd9_MA0913.1	29	0	-	0	0	.
chr7	86442653	86442654	chr7:86442654:C:T	rs13245412	C	T	C	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr7	86502512	86502513	chr7:86502513:T:C	rs2110388	T	C	C	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr7	86996139	86996140	chr7:86996140:T:A	rs1767743	T	A	T	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr7	87212654	87212655	chr7:87212655:T:C	rs2190424	T	C	C	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr7	87514187	87514188	chr7:87514188:C:T	rs1922243	C	T	T	Hoxd9_MA0913.1	15	0	+	0	0	.
chr7	87968164	87968165	chr7:87968165:G:C	rs1688902	G	C	C	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr7	88111914	88111915	chr7:88111915:C:A	rs2299198	C	A	C	Hoxd9_MA0913.1	0	1	+	8.323343304007485	8.853608248980283	CCAATAAAAA
chr7	88523462	88523463	chr7:88523463:G:A	rs10487025	G	A	G	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr7	88683575	88683576	chr7:88683576:C:G	rs2538919	C	G	C	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr7	88707348	88707349	chr7:88707349:T:C	rs1858847	T	C	T	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr7	88880319	88880320	chr7:88880320:T:C	rs7781288	T	C	T	Hoxd9_MA0913.1	17	0	+	0	0	.
chr7	89183672	89183673	chr7:89183673:A:G	rs2189054	A	G	A	Hoxd9_MA0913.1	19	0	-	0	0	.
chr7	89685908	89685909	chr7:89685909:G:C	rs10952963	G	C	G	Hoxd9_MA0913.1	11	0	-	0	0	.
chr7	89739897	89739898	chr7:89739898:G:A	rs4728830	G	A	A	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr7	89796737	89796738	chr7:89796738:C:A	rs73220186	C	A	C	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr7	90391136	90391137	chr7:90391137:C:G	rs6967365	C	G	C	Hoxd9_MA0913.1	1	1	+	8.60979621184233	5.517231199557616	ACAATAAAAT
chr7	91125972	91125973	chr7:91125973:T:C	rs76600967	T	C	T	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr7	91137763	91137764	chr7:91137764:G:A	rs803164	G	A	G	Hoxd9_MA0913.1	21	0	+	0	0	.
chr7	91925141	91925142	chr7:91925142:C:T	rs10251036	C	T	C	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr7	92717979	92717980	chr7:92717980:C:T	rs114364389	C	T	C	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr7	92949927	92949928	chr7:92949928:C:T	rs10224528	C	T	T	Hoxd9_MA0913.1	28	0	+	0	0	.
chr7	92973548	92973549	chr7:92973549:C:T	rs71560839	C	T	C	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr7	93012403	93012404	chr7:93012404:A:T	rs79401725	A	T	A	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr7	93545318	93545319	chr7:93545319:T:G	rs13229065	T	G	T	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr7	93779292	93779293	chr7:93779293:C:T	rs7779311	C	T	C	Hoxd9_MA0913.1	23	0	+	0	0	.
chr7	93883865	93883866	chr7:93883866:G:T	rs992311	G	T	T	Hoxd9_MA0913.1	9	1	-	7.75646393805828	8.838502353310592	GCCATTAAAC
chr7	93920894	93920895	chr7:93920895:G:C	rs180240	G	C	G	Hoxd9_MA0913.1	27	0	-	0	0	.
chr7	94351776	94351777	chr7:94351777:T:C	rs10487252	T	C	T	Hoxd9_MA0913.1	8	1	+	8.281840948251881	7.760507910628393	GCAATTAATA
chr7	94396611	94396612	chr7:94396612:A:G	rs388625	A	G	A	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr7	94426731	94426732	chr7:94426732:G:T	rs2621215	G	T	T	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr7	94432288	94432289	chr7:94432289:C:A	rs116187617	C	A	C	Hoxd9_MA0913.1	13	0	+	0	0	.
chr7	94449345	94449346	chr7:94449346:T:C	rs549255809	T	C	T	Hoxd9_MA0913.1	27	0	-	0	0	.
chr7	94450098	94450099	chr7:94450099:T:C	rs17268069	T	C	T	Hoxd9_MA0913.1	15	0	+	0	0	.
chr7	94495135	94495136	chr7:94495136:G:T	rs12533945	G	T	G	Hoxd9_MA0913.1	29	0	+	0	0	.
chr7	94851630	94851631	chr7:94851631:G:T	rs12704767	G	T	G	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr7	95249500	95249501	chr7:95249501:A:G	rs73222002	A	G	A	Hoxd9_MA0913.1	18	0	-	0	0	.
chr7	95404103	95404104	chr7:95404104:C:T	rs17166868	C	T	T	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr7	95611422	95611423	chr7:95611423:C:A	rs7787663	C	A	C	Hoxd9_MA0913.1	26	0	-	0	0	.
chr7	95611434	95611435	chr7:95611435:C:T	rs112988987	C	T	C	Hoxd9_MA0913.1	14	0	-	0	0	.
chr7	95624136	95624137	chr7:95624137:C:T	rs12669414	C	T	T	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr7	95630142	95630143	chr7:95630143:C:T	rs58209481	C	T	C	Hoxd9_MA0913.1	15	0	+	0	0	.
chr7	96030438	96030439	chr7:96030439:G:A	rs2188507	G	A	G	Hoxd9_MA0913.1	11	0	-	0	0	.
chr7	96246343	96246344	chr7:96246344:G:C	rs12704838	G	C	G	Hoxd9_MA0913.1	26	0	-	0	0	.
chr7	96464300	96464301	chr7:96464301:C:T	rs2724059	C	T	C	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr7	96508361	96508362	chr7:96508362:A:G	rs10085588	A	G	G	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr7	96698628	96698629	chr7:96698629:C:T	rs4729277	C	T	T	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr7	96833765	96833766	chr7:96833766:C:T	rs576129699	C	T	C	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr7	96869600	96869601	chr7:96869601:T:G	rs2948240	T	G	T	Hoxd9_MA0913.1	2	1	-	8.853608248980283	7.931939052009941	ACAATAAAAA
chr7	96887715	96887716	chr7:96887716:T:G	rs6465560	T	G	T	Hoxd9_MA0913.1	8	1	-	8.490366725581566	6.490703085929026	GTCATTAAAA
chr7	96991278	96991279	chr7:96991279:A:G	rs17168126	A	G	A	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr7	96995966	96995967	chr7:96995967:T:G	rs886583	T	G	G	Hoxd9_MA0913.1	3	1	-	8.490366725581566	4.024136055181511	GTCATTAAAA
chr7	98216118	98216119	chr7:98216119:G:A	rs6969321	G	A	A	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr7	98953528	98953529	chr7:98953529:C:T	rs3815232	C	T	T	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr7	99326638	99326639	chr7:99326639:T:C	rs149089271	T	C	T	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr7	99406873	99406874	chr7:99406874:T:C	rs917152	T	C	T	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr7	100176703	100176704	chr7:100176704:G:A	rs12705074	G	A	G	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr7	100331760	100331761	chr7:100331761:G:T	rs573613722	G	T	g	Hoxd9_MA0913.1	1	1	-	8.60979621184233	6.1899778358170705	ACAATAAAAT
chr7	100980567	100980568	chr7:100980568:A:C	rs11765099	A	C	a	Hoxd9_MA0913.1	20	0	+	0	0	.
chr7	101058837	101058838	chr7:101058838:A:C	rs57645356	A	C	A	Hoxd9_MA0913.1	15	0	-	0	0	.
chr7	101162226	101162227	chr7:101162227:G:A	rs10953325	G	A	G	Hoxd9_MA0913.1	12	0	-	0	0	.
chr7	101292124	101292125	chr7:101292125:A:G	rs56082734	A	G	A	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr7	101383135	101383136	chr7:101383136:C:G	rs556448804	C	G	C	Hoxd9_MA0913.1	25	0	-	0	0	.
chr7	101435430	101435431	chr7:101435431:A:T	rs35396835	A	T	A	Hoxd9_MA0913.1	17	0	-	0	0	.
chr7	101472936	101472937	chr7:101472937:T:C	rs1008064	T	C	C	Hoxd9_MA0913.1	26	0	-	0	0	.
chr7	101482425	101482426	chr7:101482426:A:G	rs34571822	A	G	G	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr7	101559427	101559428	chr7:101559428:G:A	rs10447813	G	A	G	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr7	101561373	101561374	chr7:101561374:G:T	rs62465120	G	T	G	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr7	101677290	101677291	chr7:101677291:A:G	rs712846	A	G	A	Hoxd9_MA0913.1	18	0	+	0	0	.
chr7	102069896	102069897	chr7:102069897:G:C	rs405141	G	C	C	Hoxd9_MA0913.1	23	0	-	0	0	.
chr7	102164847	102164848	chr7:102164848:G:A	rs446513	G	A	G	Hoxd9_MA0913.1	12	0	-	0	0	.
chr7	102223634	102223635	chr7:102223635:G:A	rs11761564	G	A	G	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr7	102926716	102926717	chr7:102926717:G:A	rs112879389	G	A	G	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr7	102926721	102926722	chr7:102926722:G:A	rs4398822	G	A	G	Hoxd9_MA0913.1	0	1	+	9.760171550280933	8.812437826870472	GCAATTAAAA
chr7	103529712	103529713	chr7:103529713:A:G	rs2191706	A	G	A	Hoxd9_MA0913.1	13	0	+	0	0	.
chr7	103533716	103533717	chr7:103533717:A:G	rs2237624	A	G	A	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr7	103576771	103576772	chr7:103576772:A:C	rs362626	A	C	C	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr7	103630673	103630674	chr7:103630674:C:T	rs3025967	C	T	C	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr7	103887532	103887533	chr7:103887533:G:A	rs10257449	G	A	G	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr7	103930318	103930319	chr7:103930319:C:T	rs6972635	C	T	C	Hoxd9_MA0913.1	19	0	-	0	0	.
chr7	104122458	104122459	chr7:104122459:G:A	rs41359645	G	A	G	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr7	104224636	104224637	chr7:104224637:G:A	rs76983807	G	A	G	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr7	104958000	104958001	chr7:104958001:T:C	rs6466030	T	C	C	Hoxd9_MA0913.1	28	0	+	0	0	.
chr7	105012287	105012288	chr7:105012288:C:T	rs77205034	C	T	C	Hoxd9_MA0913.1	14	0	+	0	0	.
chr7	105039046	105039047	chr7:105039047:G:A	rs145688945	G	A	G	Hoxd9_MA0913.1	11	0	-	0	0	.
chr7	105157421	105157422	chr7:105157422:C:T	rs376650036	C	T	C	Hoxd9_MA0913.1	27	0	+	0	0	.
chr7	105773475	105773476	chr7:105773476:C:A	rs17152107	C	A	A	Hoxd9_MA0913.1	0	1	-	8.594690316172638	5.5575476202197684	GCCATTAAAT
chr7	105938519	105938520	chr7:105938520:G:T	rs193854	G	T	T	Hoxd9_MA0913.1	28	0	+	0	0	.
chr7	105995593	105995594	chr7:105995594:A:T	rs2526976	A	T	T	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr7	106031878	106031879	chr7:106031879:G:A	rs768854564	G	A	G	Hoxd9_MA0913.1	20	0	+	0	0	.
chr7	106452084	106452085	chr7:106452085:G:T	rs6942699	G	T	G	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr7	106620888	106620889	chr7:106620889:A:C	rs62484471	A	C	A	Hoxd9_MA0913.1	5	1	+	8.2283733949328	4.79357162356343	GCAATAAAGA
chr7	106844376	106844377	chr7:106844377:C:T	rs117046255	C	T	c	Hoxd9_MA0913.1	18	0	-	0	0	.
chr7	107228439	107228440	chr7:107228440:T:C	rs6952188	T	C	T	Hoxd9_MA0913.1	5	1	-	9.209394307523764	2.9877311546278964	GTAATAAAAT
chr7	107318780	107318781	chr7:107318781:A:C	rs12532849	A	C	C	Hoxd9_MA0913.1	9	1	-	7.943390935685037	6.720709632053499	GCAATTAAGT
chr7	107364800	107364801	chr7:107364801:T:C	rs17154040	T	C	T	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr7	107436579	107436580	chr7:107436580:T:C	rs79340623	T	C	T	Hoxd9_MA0913.1	17	0	+	0	0	.
chr7	107581587	107581588	chr7:107581588:C:G	rs75384005	C	G	C	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr7	107812239	107812240	chr7:107812240:T:C	rs2190392	T	C	T	Hoxd9_MA0913.1	29	0	-	0	0	.
chr7	107815792	107815793	chr7:107815793:C:A	rs28378505	C	A	C	Hoxd9_MA0913.1	0	1	-	9.55752993525279	6.52038723929992	GCAATAAAAT
chr7	107923180	107923181	chr7:107923181:G:C	rs17154619	G	C	G	Hoxd9_MA0913.1	18	0	+	0	0	.
chr7	108065590	108065591	chr7:108065591:G:A	rs114084142	G	A	G	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr7	108233498	108233499	chr7:108233499:T:C	rs2267877	T	C	T	Hoxd9_MA0913.1	26	0	-	0	0	.
chr7	108497221	108497222	chr7:108497222:T:C	rs10250374	T	C	T	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr7	108582199	108582200	chr7:108582200:C:T	rs34668718	C	T	C	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr7	108597803	108597804	chr7:108597804:A:G	rs76610249	A	G	A	Hoxd9_MA0913.1	8	1	+	8.678133135028622	7.105164557570679	GCAATTAAAC
chr7	108870535	108870536	chr7:108870536:T:C	rs77815726	T	C	T	Hoxd9_MA0913.1	17	0	-	0	0	.
chr7	109668471	109668472	chr7:109668472:T:C	rs13225294	T	C	T	Hoxd9_MA0913.1	15	0	+	0	0	.
chr7	109714451	109714452	chr7:109714452:G:A	rs10237135	G	A	G	Hoxd9_MA0913.1	10	0	+	0	0	.
chr7	109714463	109714464	chr7:109714464:C:T	rs1517178	C	T	T	Hoxd9_MA0913.1	22	0	+	0	0	.
chr7	109986687	109986688	chr7:109986688:T:C	rs2711313	T	C	C	Hoxd9_MA0913.1	13	0	+	0	0	.
chr7	110070940	110070941	chr7:110070941:G:C	rs7788978	G	C	g	Hoxd9_MA0913.1	17	0	-	0	0	.
chr7	110253548	110253549	chr7:110253549:C:T	rs10274223	C	T	C	Hoxd9_MA0913.1	12	0	-	0	0	.
chr7	110296489	110296490	chr7:110296490:C:T	rs38754	C	T	C	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr7	110489370	110489371	chr7:110489371:G:A	rs113072162	G	A	G	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr7	111437919	111437920	chr7:111437920:A:C	rs9656184	A	C	A	Hoxd9_MA0913.1	7	1	+	8.371167929409406	5.077321177690975	GTAATAAAAC
chr7	112101416	112101417	chr7:112101417:C:G	rs166313	C	G	c	Hoxd9_MA0913.1	28	0	-	0	0	.
chr7	112119049	112119050	chr7:112119050:G:A	rs28514718	G	A	G	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr7	112455198	112455199	chr7:112455199:G:A	rs117210448	G	A	G	Hoxd9_MA0913.1	19	0	+	0	0	.
chr7	112567407	112567408	chr7:112567408:C:T	rs3111441	C	T	T	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr7	112985814	112985815	chr7:112985815:C:T	rs6466426	C	T	C	Hoxd9_MA0913.1	21	0	-	0	0	.
chr7	113067257	113067258	chr7:113067258:T:C	rs1852915	T	C	T	Hoxd9_MA0913.1	3	1	-	8.282172881897674	6.454553941402571	CCAATTAAAA
chr7	113371801	113371802	chr7:113371802:A:G	rs56258749	A	G	G	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr7	113466445	113466446	chr7:113466446:C:T	rs4473968	C	T	T	Hoxd9_MA0913.1	15	0	-	0	0	.
chr7	115052633	115052634	chr7:115052634:G:C	rs74584150	G	C	G	Hoxd9_MA0913.1	18	0	+	0	0	.
chr7	115387924	115387925	chr7:115387925:T:A	rs73201933	T	A	T	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr7	115447649	115447650	chr7:115447650:A:T	rs1554795	A	T	T	Hoxd9_MA0913.1	2	1	+	8.568625789732518	2.1182817578817374	ACAATTAAAT
chr7	115511560	115511561	chr7:115511561:T:C	rs11980736	T	C	C	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr7	115783383	115783384	chr7:115783384:C:A	rs7809045	C	A	C	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr7	116284684	116284685	chr7:116284685:A:G	rs17138572	A	G	A	Hoxd9_MA0913.1	10	0	-	0	0	.
chr7	116338183	116338184	chr7:116338184:T:C	rs73203892	T	C	T	Hoxd9_MA0913.1	11	0	+	0	0	.
chr7	116516676	116516677	chr7:116516677:A:T	rs7811851	A	T	T	Hoxd9_MA0913.1	14	0	-	0	0	.
chr7	116570788	116570789	chr7:116570789:T:C	rs80227654	T	C	T	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr7	116798363	116798364	chr7:116798364:G:A	rs6566	G	A	A	Hoxd9_MA0913.1	9	1	+	8.293678209511443	9.760171550280933	GCAATTAAAG
chr7	116805036	116805037	chr7:116805037:G:A	rs187437	G	A	A	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr7	116859356	116859357	chr7:116859357:G:A	rs73471198	G	A	G	Hoxd9_MA0913.1	26	0	-	0	0	.
chr7	116859384	116859385	chr7:116859385:C:T	rs34084325	C	T	C	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr7	116967558	116967559	chr7:116967559:T:C	rs10259701	T	C	T	Hoxd9_MA0913.1	4	1	+	8.123883530932645	4.831749279157664	GCGATAAAAA
chr7	116967559	116967560	chr7:116967560:A:G	rs117967194	A	G	A	Hoxd9_MA0913.1	5	1	+	8.123883530932645	1.902220378036776	GCGATAAAAA
chr7	117262803	117262804	chr7:117262804:T:C	rs10226864	T	C	C	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr7	117550723	117550724	chr7:117550724:C:A	rs151178152	C	A	C	Hoxd9_MA0913.1	1	1	+	9.51635951314298	7.09654113711772	GCAATTAAAT
chr7	117874785	117874786	chr7:117874786:T:G	rs6965740	T	G	T	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr7	117945188	117945189	chr7:117945189:T:C	rs116037062	T	C	T	Hoxd9_MA0913.1	27	0	-	0	0	.
chr7	118195601	118195602	chr7:118195602:A:T	rs1054032	A	T	T	Hoxd9_MA0913.1	27	0	+	0	0	.
chr7	118195893	118195894	chr7:118195894:A:G	rs74723860	A	G	A	Hoxd9_MA0913.1	29	0	-	0	0	.
chr7	118680303	118680304	chr7:118680304:G:T	rs4730885	G	T	T	Hoxd9_MA0913.1	1	1	-	8.323343304007485	5.903524927982227	CCAATAAAAA
chr7	118802539	118802540	chr7:118802540:G:A	rs1072394	G	A	G	Hoxd9_MA0913.1	15	0	+	0	0	.
chr7	118872063	118872064	chr7:118872064:A:C	rs2402442	A	C	A	Hoxd9_MA0913.1	4	1	-	8.490366725581566	5.198232473806588	GTCATTAAAA
chr7	119944354	119944355	chr7:119944355:G:A	rs13233786	G	A	G	Hoxd9_MA0913.1	27	0	+	0	0	.
chr7	121015440	121015441	chr7:121015441:T:G	rs112499241	T	G	T	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr7	121020627	121020628	chr7:121020628:C:T	rs16870531	C	T	C	Hoxd9_MA0913.1	1	1	+	8.60979621184233	8.261660584113304	ACAATAAAAT
chr7	121098214	121098215	chr7:121098215:A:G	rs1005400	A	G	A	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr7	121215273	121215274	chr7:121215274:A:G	rs10251901	A	G	A	Hoxd9_MA0913.1	14	0	+	0	0	.
chr7	121480454	121480455	chr7:121480455:A:G	rs12538669	A	G	A	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr7	121547925	121547926	chr7:121547926:A:G	rs78946118	A	G	A	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr7	121842974	121842975	chr7:121842975:C:A	rs58970730	C	A	C	Hoxd9_MA0913.1	20	0	-	0	0	.
chr7	122302619	122302620	chr7:122302620:C:A	rs6968240	C	A	C	Hoxd9_MA0913.1	16	0	+	0	0	.
chr7	122688756	122688757	chr7:122688757:G:A	rs67327643	G	A	G	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr7	122726441	122726442	chr7:122726442:T:G	rs6948815	T	G	T	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr7	123058184	123058185	chr7:123058185:G:A	rs7801022	G	A	G	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr7	123751586	123751587	chr7:123751587:C:T	rs3757505	C	T	C	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr7	124020160	124020161	chr7:124020161:A:T	rs4731136	A	T	A	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr7	124319398	124319399	chr7:124319399:C:T	rs78198525	C	T	C	Hoxd9_MA0913.1	9	1	+	8.371167929409406	9.209394307523764	GTAATAAAAC
chr7	124630293	124630294	chr7:124630294:G:T	rs2049439	G	T	T	Hoxd9_MA0913.1	9	1	-	8.329997507299597	9.412035922551908	GTAATTAAAC
chr7	124810990	124810991	chr7:124810991:G:T	rs11979724	G	T	G	Hoxd9_MA0913.1	26	0	+	0	0	.
chr7	125640028	125640029	chr7:125640029:A:G	rs7782495	A	G	G	Hoxd9_MA0913.1	7	1	+	8.853608248980283	2.01446377162594	ACAATAAAAA
chr7	125715155	125715156	chr7:125715156:T:C	rs10954081	T	C	T	Hoxd9_MA0913.1	14	0	-	0	0	.
chr7	125831020	125831021	chr7:125831021:C:T	rs79899782	C	T	C	Hoxd9_MA0913.1	23	0	+	0	0	.
chr7	126135354	126135355	chr7:126135355:T:C	rs10954106	T	C	T	Hoxd9_MA0913.1	22	0	+	0	0	.
chr7	126589684	126589685	chr7:126589685:T:C	rs1592374	T	C	T	Hoxd9_MA0913.1	4	1	+	7.801678332738202	4.509544080963223	GCAATAAACA
chr7	126651343	126651344	chr7:126651344:T:C	rs11770766	T	C	T	Hoxd9_MA0913.1	4	1	+	8.812437826870472	5.520303575095493	ACAATTAAAA
chr7	126994044	126994045	chr7:126994045:A:G	rs10265258	A	G	G	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr7	126994056	126994057	chr7:126994057:G:C	rs10236227	G	C	G	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr7	126994082	126994083	chr7:126994083:C:T	rs10236120	C	T	C	Hoxd9_MA0913.1	19	0	+	0	0	.
chr7	127718396	127718397	chr7:127718397:G:A	chr7:127718397:G:A	G	A	G	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr7	127781467	127781468	chr7:127781468:G:T	rs1038518852	G	T	G	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr7	127818411	127818412	chr7:127818412:C:G	rs6965698	C	G	C	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr7	127891159	127891160	chr7:127891160:G:C	rs17151488	G	C	G	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr7	128066628	128066629	chr7:128066629:G:T	rs3757755	G	T	G	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr7	128066633	128066634	chr7:128066634:T:C	rs3757754	T	C	C	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr7	128288177	128288178	chr7:128288178:T:C	rs57060449	T	C	T	Hoxd9_MA0913.1	26	0	+	0	0	.
chr7	128290427	128290428	chr7:128290428:C:T	rs10280854	C	T	C	Hoxd9_MA0913.1	19	0	+	0	0	.
chr7	128598731	128598732	chr7:128598732:A:G	rs6467190	A	G	a	Hoxd9_MA0913.1	27	0	-	0	0	.
chr7	128716014	128716015	chr7:128716015:C:T	rs77712068	C	T	C	Hoxd9_MA0913.1	14	0	+	0	0	.
chr7	128716580	128716581	chr7:128716581:G:A	rs75925814	G	A	A	Hoxd9_MA0913.1	24	0	-	0	0	.
chr7	128733554	128733555	chr7:128733555:A:G	rs6958689	A	G	A	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr7	128874979	128874980	chr7:128874980:G:A	rs76031198	G	A	G	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr7	129053941	129053942	chr7:129053942:C:T	rs6980198	C	T	T	Hoxd9_MA0913.1	27	0	+	0	0	.
chr7	129168826	129168827	chr7:129168827:C:A	rs116711852	C	A	C	Hoxd9_MA0913.1	19	0	+	0	0	.
chr7	129328829	129328830	chr7:129328830:T:G	rs13226919	T	G	T	Hoxd9_MA0913.1	13	0	-	0	0	.
chr7	129485983	129485984	chr7:129485984:T:C	rs676947	T	C	C	Hoxd9_MA0913.1	4	1	+	8.60979621184233	5.317661960067349	ACAATAAAAT
chr7	129575053	129575054	chr7:129575054:G:T	rs77186829	G	T	G	Hoxd9_MA0913.1	23	0	-	0	0	.
chr7	129595189	129595190	chr7:129595190:G:A	rs28502851	G	A	G	Hoxd9_MA0913.1	17	0	-	0	0	.
chr7	129613011	129613012	chr7:129613012:G:A	rs753947	G	A	G	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr7	129648080	129648081	chr7:129648081:G:T	rs57200963	G	T	G	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr7	129864474	129864475	chr7:129864475:T:C	rs78222591	T	C	T	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr7	130038015	130038016	chr7:130038016:A:T	rs143717595	A	T	A	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr7	130143395	130143396	chr7:130143396:G:A	rs4236629	G	A	A	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr7	130352891	130352892	chr7:130352892:G:C	rs74705727	G	C	G	Hoxd9_MA0913.1	28	0	-	0	0	.
chr7	130373986	130373987	chr7:130373987:G:A	rs149447423	G	A	C	Hoxd9_MA0913.1	29	0	-	0	0	.
chr7	130441376	130441377	chr7:130441377:C:T	rs752730610	C	T	C	Hoxd9_MA0913.1	20	0	-	0	0	.
chr7	130894946	130894947	chr7:130894947:T:C	rs116035641	T	C	T	Hoxd9_MA0913.1	2	1	-	8.853608248980283	7.176149807522183	ACAATAAAAA
chr7	130901401	130901402	chr7:130901402:C:T	rs157938	C	T	C	Hoxd9_MA0913.1	16	0	-	0	0	.
chr7	130905727	130905728	chr7:130905728:A:G	rs188451935	A	G	A	Hoxd9_MA0913.1	18	0	-	0	0	.
chr7	130922153	130922154	chr7:130922154:A:G	rs78270805	A	G	A	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr7	131018486	131018487	chr7:131018487:A:G	rs4731731	A	G	A	Hoxd9_MA0913.1	7	1	+	8.812437826870472	1.9732933495161296	ACAATTAAAA
chr7	131186601	131186602	chr7:131186602:C:T	rs7798605	C	T	C	Hoxd9_MA0913.1	15	0	-	0	0	.
chr7	131328468	131328469	chr7:131328469:T:C	rs112785985	T	C	T	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr7	131328497	131328498	chr7:131328498:G:C	rs139820609	G	C	G	Hoxd9_MA0913.1	25	0	+	0	0	.
chr7	131667222	131667223	chr7:131667223:G:A	rs111866353	G	A	G	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr7	131680683	131680684	chr7:131680684:G:A	rs7795093	G	A	g	Hoxd9_MA0913.1	29	0	-	0	0	.
chr7	132090295	132090296	chr7:132090296:C:T	rs7811569	C	T	C	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr7	132270622	132270623	chr7:132270623:G:A	rs2161872	G	A	A	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr7	132394653	132394654	chr7:132394654:C:T	rs1529764	C	T	T	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr7	132431075	132431076	chr7:132431076:T:C	rs277482	T	C	C	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr7	132474641	132474642	chr7:132474642:G:A	rs558693946	G	A	a	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr7	132474674	132474675	chr7:132474675:G:T	rs73724025	G	T	G	Hoxd9_MA0913.1	17	0	+	0	0	.
chr7	132474675	132474676	chr7:132474676:A:C	rs73724026	A	C	A	Hoxd9_MA0913.1	18	0	+	0	0	.
chr7	132532582	132532583	chr7:132532583:C:A	rs141486490	C	A	C	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr7	132799290	132799291	chr7:132799291:C:T	rs56009006	C	T	C	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr7	133060464	133060465	chr7:133060465:T:G	rs9641946	T	G	G	Hoxd9_MA0913.1	5	1	+	8.490366725581566	2.3098739947955087	GTCATTAAAA
chr7	133089142	133089143	chr7:133089143:A:G	rs6955632	A	G	G	Hoxd9_MA0913.1	15	0	+	0	0	.
chr7	133563363	133563364	chr7:133563364:A:G	rs541538306	A	G	A	Hoxd9_MA0913.1	14	0	-	0	0	.
chr7	134409283	134409284	chr7:134409284:C:A	rs1791002	C	A	C	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr7	134601462	134601463	chr7:134601463:C:G	rs7796491	C	G	G	Hoxd9_MA0913.1	22	0	+	0	0	.
chr7	134974998	134974999	chr7:134974999:A:G	rs12530695	A	G	A	Hoxd9_MA0913.1	9	1	-	9.209394307523764	8.371167929409406	GTAATAAAAT
chr7	134975436	134975437	chr7:134975437:T:C	rs2732892	T	C	C	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr7	135261465	135261466	chr7:135261466:G:C	rs73156164	G	C	G	Hoxd9_MA0913.1	28	0	+	0	0	.
chr7	135272589	135272590	chr7:135272590:T:C	rs292659	T	C	C	Hoxd9_MA0913.1	4	1	+	8.531537147691377	5.239402895916397	GTCATAAAAA
chr7	135397998	135397999	chr7:135397999:T:C	rs3812281	T	C	T	Hoxd9_MA0913.1	26	0	+	0	0	.
chr7	135486349	135486350	chr7:135486350:A:G	rs4732125	A	G	A	Hoxd9_MA0913.1	3	1	+	8.60979621184233	6.782177271347225	ACAATAAAAT
chr7	135709624	135709625	chr7:135709625:G:A	rs138363309	G	A	G	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr7	135759827	135759828	chr7:135759828:A:G	rs144575961	A	G	A	Hoxd9_MA0913.1	17	0	-	0	0	.
chr7	136130447	136130448	chr7:136130448:C:T	rs2129801	C	T	T	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr7	136257456	136257457	chr7:136257457:A:G	rs116991457	A	G	A	Hoxd9_MA0913.1	21	0	-	0	0	.
chr7	136266521	136266522	chr7:136266522:A:C	rs560758215	A	C	A	Hoxd9_MA0913.1	11	0	-	0	0	.
chr7	136292695	136292696	chr7:136292696:G:A	rs2555050	G	A	A	Hoxd9_MA0913.1	21	0	+	0	0	.
chr7	137120888	137120889	chr7:137120889:A:G	rs57126425	A	G	A	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr7	137389385	137389386	chr7:137389386:G:C	rs118123572	G	C	G	Hoxd9_MA0913.1	26	0	+	0	0	.
chr7	137423779	137423780	chr7:137423780:C:G	rs12535976	C	G	G	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr7	137440435	137440436	chr7:137440436:T:C	rs1009939101	T	C	T	Hoxd9_MA0913.1	20	0	+	0	0	.
chr7	137443748	137443749	chr7:137443749:A:T	rs2288145	A	T	A	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr7	137443782	137443783	chr7:137443783:T:C	rs2288146	T	C	C	Hoxd9_MA0913.1	22	0	+	0	0	.
chr7	137471307	137471308	chr7:137471308:C:T	rs6967642	C	T	C	Hoxd9_MA0913.1	1	1	+	8.2283733949328	7.880237767203775	GCAATAAAGA
chr7	137495274	137495275	chr7:137495275:G:T	rs146205694	G	T	G	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr7	137522674	137522675	chr7:137522675:C:T	rs28711988	C	T	T	Hoxd9_MA0913.1	17	0	+	0	0	.
chr7	137642677	137642678	chr7:137642678:A:G	rs1236380954	A	G	A	Hoxd9_MA0913.1	18	0	+	0	0	.
chr7	137642779	137642780	chr7:137642780:C:T	rs11971888	C	T	T	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr7	137874708	137874709	chr7:137874709:T:C	rs3735016	T	C	C	Hoxd9_MA0913.1	4	1	+	8.853608248980283	5.561473997205303	ACAATAAAAA
chr7	137990439	137990440	chr7:137990440:T:C	rs143993907	T	C	T	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr7	137990450	137990451	chr7:137990451:C:T	rs73458483	C	T	C	Hoxd9_MA0913.1	0	1	-	8.246554688443613	7.298820965033153	GTCATTAAAT
chr7	138007852	138007853	chr7:138007853:C:T	rs113995601	C	T	C	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr7	138195014	138195015	chr7:138195015:A:G	rs148635458	A	G	A	Hoxd9_MA0913.1	7	1	+	8.334848631621252	1.4957041542669078	GCAATAAAAG
chr7	138195034	138195035	chr7:138195035:C:A	rs28480624	C	A	C	Hoxd9_MA0913.1	27	0	+	0	0	.
chr7	138245617	138245618	chr7:138245618:G:T	rs2431046	G	T	T	Hoxd9_MA0913.1	0	1	+	8.531537147691377	5.494394451738508	GTCATAAAAA
chr7	138425555	138425556	chr7:138425556:C:G	rs4626544	C	G	G	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr7	138459511	138459512	chr7:138459512:T:C	rs7798391	T	C	C	Hoxd9_MA0913.1	16	0	+	0	0	.
chr7	138608082	138608083	chr7:138608083:G:A	rs1673218	G	A	A	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr7	138819959	138819960	chr7:138819960:C:T	rs12668843	C	T	C	Hoxd9_MA0913.1	13	0	+	0	0	.
chr7	138856404	138856405	chr7:138856405:C:A	rs1993068	C	A	A	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr7	139028092	139028093	chr7:139028093:A:G	rs6467820	A	G	G	Hoxd9_MA0913.1	20	0	+	0	0	.
chr7	139107459	139107460	chr7:139107460:C:T	rs4732351	C	T	C	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr7	139361463	139361464	chr7:139361464:T:C	rs3922848	T	C	C	Hoxd9_MA0913.1	8	1	-	9.55752993525279	7.984561357794846	GCAATAAAAT
chr7	139725505	139725506	chr7:139725506:A:C	rs978690872	A	C	A	Hoxd9_MA0913.1	7	1	+	8.32301137036169	5.029164618643261	GCAATAAATA
chr7	139753281	139753282	chr7:139753282:T:G	rs1337117139	T	G	T	Hoxd9_MA0913.1	1	1	+	9.453206344661718	6.7087769601060305	GTAATAAAAA
chr7	139771746	139771747	chr7:139771747:G:C	rs73475923	G	C	G	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr7	139916864	139916865	chr7:139916865:A:G	rs115232466	A	G	A	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr7	140158719	140158720	chr7:140158720:C:G	rs6943811	C	G	G	Hoxd9_MA0913.1	27	0	+	0	0	.
chr7	140167361	140167362	chr7:140167362:C:A	rs10952576	C	A	C	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr7	140340029	140340030	chr7:140340030:G:A	rs74799352	G	A	G	Hoxd9_MA0913.1	27	0	-	0	0	.
chr7	140340056	140340057	chr7:140340057:C:T	rs78043720	C	T	C	Hoxd9_MA0913.1	0	1	-	9.412035922551908	8.464302199141448	GTAATTAAAA
chr7	140446764	140446765	chr7:140446765:T:C	rs28832645	T	C	C	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr7	140489754	140489755	chr7:140489755:T:C	rs75106010	T	C	T	Hoxd9_MA0913.1	28	0	-	0	0	.
chr7	140576821	140576822	chr7:140576822:T:C	rs269221	T	C	C	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr7	140578957	140578958	chr7:140578958:G:T	rs269216	G	T	G	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr7	140902411	140902412	chr7:140902412:T:G	rs114624715	T	G	T	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr7	141228141	141228142	chr7:141228142:T:C	rs6951501	T	C	T	Hoxd9_MA0913.1	19	0	-	0	0	.
chr7	141426000	141426001	chr7:141426001:A:G	rs11977900	A	G	A	Hoxd9_MA0913.1	9	1	-	7.984561357794846	7.146334979680488	GCAATAAAGT
chr7	141446299	141446300	chr7:141446300:G:A	rs1181758	G	A	G	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr7	141875110	141875111	chr7:141875111:C:T	rs12668089	C	T	c	Hoxd9_MA0913.1	27	0	-	0	0	.
chr7	141891544	141891545	chr7:141891545:A:G	rs1285955	A	G	a	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr7	142461793	142461794	chr7:142461794:T:C	rs2855958	T	C	.	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr7	142802724	142802725	chr7:142802725:T:G	rs11327	T	G	G	Hoxd9_MA0913.1	12	0	+	0	0	.
chr7	142805882	142805883	chr7:142805883:T:C	rs3114475	T	C	C	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr7	142813557	142813558	chr7:142813558:A:G	rs1400145206	A	G	A	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr7	143333803	143333804	chr7:143333804:C:T	rs4726606	C	T	T	Hoxd9_MA0913.1	21	0	+	0	0	.
chr7	143342686	143342687	chr7:143342687:G:A	rs62471044	G	A	G	Hoxd9_MA0913.1	11	0	+	0	0	.
chr7	143515199	143515200	chr7:143515200:C:T	rs13243737	C	T	C	Hoxd9_MA0913.1	23	0	-	0	0	.
chr7	143515200	143515201	chr7:143515201:G:A	rs17164352	G	A	G	Hoxd9_MA0913.1	22	0	-	0	0	.
chr7	143515223	143515224	chr7:143515224:G:T	rs577878407	G	T	G	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr7	143885900	143885901	chr7:143885901:C:T	rs2107593	C	T	T	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr7	144674688	144674689	chr7:144674689:A:C	rs60232451	A	C	A	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr7	144785895	144785896	chr7:144785896:T:C	rs1623765	T	C	C	Hoxd9_MA0913.1	14	0	-	0	0	.
chr7	145524371	145524372	chr7:145524372:G:C	rs2372055	G	C	G	Hoxd9_MA0913.1	24	0	-	0	0	.
chr7	145535422	145535423	chr7:145535423:G:T	rs73462030	G	T	G	Hoxd9_MA0913.1	1	1	-	8.853608248980283	6.433789872955025	ACAATAAAAA
chr7	145636483	145636484	chr7:145636484:C:T	rs2021263	C	T	C	Hoxd9_MA0913.1	25	0	-	0	0	.
chr7	146260607	146260608	chr7:146260608:A:T	rs813908	A	T	T	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr7	146308783	146308784	chr7:146308784:A:G	rs115744756	A	G	A	Hoxd9_MA0913.1	11	0	+	0	0	.
chr7	146875183	146875184	chr7:146875184:G:A	rs6942401	G	A	A	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr7	147475179	147475180	chr7:147475180:A:G	rs6464811	A	G	A	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr7	147492823	147492824	chr7:147492824:G:T	rs1534553	G	T	T	Hoxd9_MA0913.1	16	0	+	0	0	.
chr7	147498956	147498957	chr7:147498957:A:T	rs7778685	A	T	T	Hoxd9_MA0913.1	14	0	+	0	0	.
chr7	147570560	147570561	chr7:147570561:A:G	rs6962950	A	G	A	Hoxd9_MA0913.1	14	0	+	0	0	.
chr7	147587078	147587079	chr7:147587079:A:G	rs77539579	A	G	A	Hoxd9_MA0913.1	29	0	-	0	0	.
chr7	147658390	147658391	chr7:147658391:C:T	rs78291755	C	T	T	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr7	147752668	147752669	chr7:147752669:C:T	rs10952710	C	T	T	Hoxd9_MA0913.1	9	1	+	8.329997507299597	9.168223885413955	GTAATTAAAC
chr7	147795138	147795139	chr7:147795139:G:C	rs76924903	G	C	G	Hoxd9_MA0913.1	23	0	-	0	0	.
chr7	147965234	147965235	chr7:147965235:A:G	rs34664455	A	G	A	Hoxd9_MA0913.1	24	0	-	0	0	.
chr7	147965263	147965264	chr7:147965264:C:G	rs73168521	C	G	C	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr7	148178345	148178346	chr7:148178346:T:G	rs2972121	T	G	T	Hoxd9_MA0913.1	9	1	-	7.801678332738202	6.719639917485891	GCAATAAACA
chr7	148205751	148205752	chr7:148205752:A:G	rs75314116	A	G	A	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr7	148211493	148211494	chr7:148211494:G:A	rs138972598	G	A	G	Hoxd9_MA0913.1	24	0	-	0	0	.
chr7	148317001	148317002	chr7:148317002:G:A	rs6948829	G	A	G	Hoxd9_MA0913.1	28	0	+	0	0	.
chr7	148381394	148381395	chr7:148381395:C:T	rs35544280	C	T	C	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr7	148402638	148402639	chr7:148402639:T:C	rs180821994	T	C	T	Hoxd9_MA0913.1	4	1	+	8.371167929409406	5.079033677634427	GTAATAAAAC
chr7	148688632	148688633	chr7:148688633:T:C	rs10257756	T	C	T	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr7	148713317	148713318	chr7:148713318:T:C	rs142157864	T	C	T	Hoxd9_MA0913.1	29	0	+	0	0	.
chr7	148726467	148726468	chr7:148726468:C:T	rs243520	C	T	C	Hoxd9_MA0913.1	29	0	-	0	0	.
chr7	148846789	148846790	chr7:148846790:T:C	rs1023331095	T	C	T	Hoxd9_MA0913.1	2	1	-	9.55752993525279	7.8800714937946905	GCAATAAAAT
chr7	149087402	149087403	chr7:149087403:A:G	rs6959224	A	G	G	Hoxd9_MA0913.1	14	0	-	0	0	.
chr7	149172822	149172823	chr7:149172823:A:G	rs6943937	A	G	G	Hoxd9_MA0913.1	17	0	+	0	0	.
chr7	149356142	149356143	chr7:149356143:G:A	rs10241539	G	A	A	Hoxd9_MA0913.1	2	1	-	8.490366725581566	2.9616918907011263	GTCATTAAAA
chr7	150320318	150320319	chr7:150320319:T:C	rs2108854	T	C	t	Hoxd9_MA0913.1	28	0	-	0	0	.
chr7	150421440	150421441	chr7:150421441:T:G	rs79859571	T	G	T	Hoxd9_MA0913.1	1	1	+	8.531537147691377	5.787107763135689	GTCATAAAAA
chr7	151212644	151212645	chr7:151212645:T:C	rs1065071	T	C	C	Hoxd9_MA0913.1	21	0	-	0	0	.
chr7	151257045	151257046	chr7:151257046:T:C	rs72617363	T	C	T	Hoxd9_MA0913.1	15	0	-	0	0	.
chr7	151315354	151315355	chr7:151315355:A:C	rs78019361	A	C	A	Hoxd9_MA0913.1	4	1	-	7.75646393805828	4.4643296862833	GCCATTAAAC
chr7	151416056	151416057	chr7:151416057:T:C	rs34311452	T	C	T	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr7	151519910	151519911	chr7:151519911:T:C	rs747329755	T	C	T	Hoxd9_MA0913.1	10	0	-	0	0	.
chr7	151620676	151620677	chr7:151620677:G:A	rs4726063	G	A	-	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr7	151630919	151630920	chr7:151630920:C:G	rs61364355	C	G	-	Hoxd9_MA0913.1	10	0	-	0	0	.
chr7	151630933	151630934	chr7:151630934:G:A	rs4726069	G	A	-	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr7	151637844	151637845	chr7:151637845:G:A	rs151022060	G	A	-	Hoxd9_MA0913.1	18	0	-	0	0	.
chr7	151662347	151662348	chr7:151662348:C:T	rs953221	C	T	-	Hoxd9_MA0913.1	26	0	-	0	0	.
chr7	151662387	151662388	chr7:151662388:C:T	rs954025	C	T	-	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr7	151682740	151682741	chr7:151682741:T:C	rs73158151	T	C	-	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr7	152114463	152114464	chr7:152114464:G:A	rs35543978	G	A	G	Hoxd9_MA0913.1	22	0	-	0	0	.
chr7	152575196	152575197	chr7:152575197:T:C	rs4726177	T	C	C	Hoxd9_MA0913.1	23	0	-	0	0	.
chr7	152760522	152760523	chr7:152760523:C:G	rs1282081713	C	G	C	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr7	152833405	152833406	chr7:152833406:A:G	rs11761126	A	G	A	Hoxd9_MA0913.1	15	0	+	0	0	.
chr7	152860489	152860490	chr7:152860490:T:C	rs73490980	T	C	T	Hoxd9_MA0913.1	3	1	-	7.7976343601680895	5.970015419672985	GCCATAAAAC
chr7	153012486	153012487	chr7:153012487:C:T	rs10231805	C	T	C	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr7	153382893	153382894	chr7:153382894:A:G	rs115186412	A	G	A	Hoxd9_MA0913.1	0	1	+	8.60979621184233	9.55752993525279	ACAATAAAAT
chr7	153432830	153432831	chr7:153432831:T:C	rs10261198	T	C	C	Hoxd9_MA0913.1	2	1	-	9.168223885413955	7.490765443955856	GTAATTAAAT
chr7	153470568	153470569	chr7:153470569:A:G	rs7785678	A	G	G	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr7	153832170	153832171	chr7:153832171:T:C	rs2192276	T	C	C	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr7	153858638	153858639	chr7:153858639:A:G	rs28578766	A	G	G	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr7	154168112	154168113	chr7:154168113:T:C	rs4131646	T	C	C	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr7	154597988	154597989	chr7:154597989:A:G	rs11767781	A	G	G	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr7	155186230	155186231	chr7:155186231:C:A	rs7808464	C	A	N	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr7	155194025	155194026	chr7:155194026:A:G	rs4246099	A	G	G	Hoxd9_MA0913.1	28	0	-	0	0	.
chr7	155295363	155295364	chr7:155295364:T:A	rs34369781	T	A	A	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr7	155312411	155312412	chr7:155312412:G:A	rs60709693	G	A	g	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr7	155326466	155326467	chr7:155326467:G:A	rs36148308	G	A	-	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr7	155393087	155393088	chr7:155393088:C:T	rs7785988	C	T	C	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr7	155568336	155568337	chr7:155568337:C:T	rs73498114	C	T	C	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr7	155779114	155779115	chr7:155779115:C:T	rs11520636	C	T	C	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr7	156603776	156603777	chr7:156603777:T:C	rs3778929	T	C	T	Hoxd9_MA0913.1	25	0	+	0	0	.
chr7	156667667	156667668	chr7:156667668:C:T	rs1033119403	C	T	C	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr7	156722675	156722676	chr7:156722676:G:A	rs142762645	G	A	G	Hoxd9_MA0913.1	26	0	-	0	0	.
chr7	156990828	156990829	chr7:156990829:T:G	rs6959718	T	G	T	Hoxd9_MA0913.1	8	1	-	8.287725110553424	6.2880614709008835	GTCATAAAAT
chr7	157398716	157398717	chr7:157398717:A:G	rs1025542443	A	G	A	Hoxd9_MA0913.1	5	1	+	8.323343304007485	2.101680151111617	CCAATAAAAA
chr7	157412043	157412044	chr7:157412044:G:A	rs10255221	G	A	G	Hoxd9_MA0913.1	1	1	-	8.082713108822833	7.73457748109381	GCGATTAAAA
chr7	157444674	157444675	chr7:157444675:G:A	rs2366558	G	A	G	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr7	157444696	157444697	chr7:157444697:G:A	rs887627	G	A	G	Hoxd9_MA0913.1	21	0	+	0	0	.
chr7	157485931	157485932	chr7:157485932:G:T	rs1076434	G	T	G	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr7	158031412	158031413	chr7:158031413:C:T	rs60273347	C	T	C	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr7	158164638	158164639	chr7:158164639:C:G	rs4610688	C	G	G	Hoxd9_MA0913.1	25	0	-	0	0	.
chr7	158164651	158164652	chr7:158164652:C:G	rs4571685	C	G	G	Hoxd9_MA0913.1	12	0	-	0	0	.
chr7	158461177	158461178	chr7:158461178:C:G	rs73178259	C	G	C	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr7	158461190	158461191	chr7:158461191:A:G	rs1733156	A	G	G	Hoxd9_MA0913.1	0	1	+	8.60979621184233	9.55752993525279	ACAATAAAAT
chr7	158465994	158465995	chr7:158465995:T:C	rs1670362	T	C	t	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr7	158634033	158634034	chr7:158634034:A:G	rs12533904	A	G	A	Hoxd9_MA0913.1	27	0	-	0	0	.
chr7	158651022	158651023	chr7:158651023:A:G	rs372376715	A	G	A	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr7	158680646	158680647	chr7:158680647:G:T	rs2305470	G	T	T	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr7	158761025	158761026	chr7:158761026:G:C	rs12668655	G	C	G	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr7	158835317	158835318	chr7:158835318:A:G	rs2383435	A	G	G	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr7	158921427	158921428	chr7:158921428:G:A	rs3763419	G	A	G	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr7	159126443	159126444	chr7:159126444:C:G	rs148088071	C	G	C	Hoxd9_MA0913.1	11	0	+	0	0	.
chr8	233545	233546	chr8:233546:G:A	rs78978495	G	A	.	Hoxd9_MA0913.1	2	1	-	8.594690316172638	3.066015481292197	GCCATTAAAT
chr8	307129	307130	chr8:307130:T:C	rs73669404	T	C	.	Hoxd9_MA0913.1	29	0	-	0	0	.
chr8	334466	334467	chr8:334467:A:G	rs41379847	A	G	.	Hoxd9_MA0913.1	9	1	+	7.801678332738202	6.335184991968711	GCAATAAACA
chr8	376521	376522	chr8:376522:C:T	rs13271818	C	T	.	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr8	395979	395980	chr8:395980:T:G	rs7016014	T	G	.	Hoxd9_MA0913.1	8	1	-	8.879672775420401	6.88000913576786	GCCATAAAAA
chr8	594754	594755	chr8:594755:G:A	rs930733	G	A	A	Hoxd9_MA0913.1	10	0	+	0	0	.
chr8	665703	665704	chr8:665704:C:T	rs2044936	C	T	C	Hoxd9_MA0913.1	9	1	+	8.371167929409406	9.209394307523764	GTAATAAAAC
chr8	665714	665715	chr8:665715:C:T	rs73177093	C	T	C	Hoxd9_MA0913.1	20	0	+	0	0	.
chr8	705349	705350	chr8:705350:G:A	rs77699383	G	A	G	Hoxd9_MA0913.1	20	0	-	0	0	.
chr8	705384	705385	chr8:705385:A:G	rs7000189	A	G	G	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr8	763980	763981	chr8:763981:C:T	rs4074580	C	T	C	Hoxd9_MA0913.1	13	0	-	0	0	.
chr8	1229386	1229387	chr8:1229387:A:G	rs12155891	A	G	G	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr8	1586791	1586792	chr8:1586792:T:C	rs3991915	T	C	C	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr8	1741010	1741011	chr8:1741011:A:C	rs11782618	A	C	A	Hoxd9_MA0913.1	21	0	-	0	0	.
chr8	1800240	1800241	chr8:1800241:T:C	rs112044149	T	C	-	Hoxd9_MA0913.1	19	0	+	0	0	.
chr8	2020975	2020976	chr8:2020976:A:G	rs9314445	A	G	A	Hoxd9_MA0913.1	25	0	+	0	0	.
chr8	2034618	2034619	chr8:2034619:C:T	rs77682887	C	T	C	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr8	2034628	2034629	chr8:2034629:C:A	rs6558584	C	A	A	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr8	2922789	2922790	chr8:2922790:C:T	rs7818325	C	T	C	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr8	3058579	3058580	chr8:3058580:C:A	rs6558706	C	A	A	Hoxd9_MA0913.1	10	0	+	0	0	.
chr8	3236818	3236819	chr8:3236819:G:T	rs59014653	G	T	G	Hoxd9_MA0913.1	27	0	+	0	0	.
chr8	3312163	3312164	chr8:3312164:C:G	rs1910377	C	G	G	Hoxd9_MA0913.1	27	0	-	0	0	.
chr8	3364459	3364460	chr8:3364460:G:C	rs35986811	G	C	G	Hoxd9_MA0913.1	11	0	-	0	0	.
chr8	3594892	3594893	chr8:3594893:T:G	rs11775765	T	G	T	Hoxd9_MA0913.1	14	0	+	0	0	.
chr8	3605846	3605847	chr8:3605847:C:A	rs62473914	C	A	C	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr8	3822359	3822360	chr8:3822360:G:A	rs7006516	G	A	-	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr8	3855520	3855521	chr8:3855521:C:T	rs10092398	C	T	T	Hoxd9_MA0913.1	2	1	-	8.082713108822833	9.760171550280933	GCGATTAAAA
chr8	3855528	3855529	chr8:3855529:T:A	rs117804076	T	A	T	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr8	3989352	3989353	chr8:3989353:T:A	rs76339179	T	A	T	Hoxd9_MA0913.1	11	0	-	0	0	.
chr8	4000186	4000187	chr8:4000187:G:A	rs2627411	G	A	A	Hoxd9_MA0913.1	13	0	-	0	0	.
chr8	4062289	4062290	chr8:4062290:T:A	rs1895889	T	A	t	Hoxd9_MA0913.1	24	0	+	0	0	.
chr8	4151048	4151049	chr8:4151049:A:G	rs1714727	A	G	A	Hoxd9_MA0913.1	15	0	+	0	0	.
chr8	4310560	4310561	chr8:4310561:G:C	rs4875327	G	C	C	Hoxd9_MA0913.1	24	0	+	0	0	.
chr8	4338586	4338587	chr8:4338587:C:G	rs58123013	C	G	C	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr8	4338589	4338590	chr8:4338590:A:G	rs144686884	A	G	A	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr8	4338657	4338658	chr8:4338658:C:T	rs6558864	C	T	T	Hoxd9_MA0913.1	17	0	+	0	0	.
chr8	4631361	4631362	chr8:4631362:A:C	rs7816030	A	C	A	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr8	4838076	4838077	chr8:4838077:T:A	rs116553946	T	A	T	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr8	4838100	4838101	chr8:4838101:G:C	rs4875395	G	C	G	Hoxd9_MA0913.1	17	0	+	0	0	.
chr8	5320990	5320991	chr8:5320991:C:A	rs1004177	C	A	A	Hoxd9_MA0913.1	16	0	+	0	0	.
chr8	5809041	5809042	chr8:5809042:C:T	rs10503334	C	T	T	Hoxd9_MA0913.1	26	0	+	0	0	.
chr8	5894533	5894534	chr8:5894534:A:G	rs2840492	A	G	A	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr8	5900463	5900464	chr8:5900464:A:G	rs73191714	A	G	A	Hoxd9_MA0913.1	3	1	+	9.453206344661718	7.625587404166614	GTAATAAAAA
chr8	5988041	5988042	chr8:5988042:A:G	rs2247875	A	G	A	Hoxd9_MA0913.1	17	0	-	0	0	.
chr8	5988078	5988079	chr8:5988079:C:T	rs2816447	C	T	T	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr8	6435231	6435232	chr8:6435232:T:C	rs2166011	T	C	C	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr8	6534245	6534246	chr8:6534246:T:C	rs2922881	T	C	C	Hoxd9_MA0913.1	20	0	+	0	0	.
chr8	6661021	6661022	chr8:6661022:T:G	rs2980647	T	G	T	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr8	6773616	6773617	chr8:6773617:T:C	rs2936524	T	C	C	Hoxd9_MA0913.1	18	0	+	0	0	.
chr8	6802016	6802017	chr8:6802017:A:C	rs12381538	A	C	A	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr8	6840982	6840983	chr8:6840983:T:A	rs140703882	T	A	T	Hoxd9_MA0913.1	17	0	+	0	0	.
chr8	6880121	6880122	chr8:6880122:C:T	rs2978862	C	T	C	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr8	6948691	6948692	chr8:6948692:A:G	rs2702879	A	G	G	Hoxd9_MA0913.1	23	0	+	0	0	.
chr8	7512620	7512621	chr8:7512621:G:A	rs2737979	G	A	.	Hoxd9_MA0913.1	26	0	-	0	0	.
chr8	7926424	7926425	chr8:7926425:C:T	rs2739880	C	T	T	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr8	8224206	8224207	chr8:8224207:T:G	rs59397409	T	G	.	Hoxd9_MA0913.1	26	0	-	0	0	.
chr8	8247882	8247883	chr8:8247883:T:C	rs17594065	T	C	T	Hoxd9_MA0913.1	3	1	-	8.282172881897674	6.454553941402571	CCAATTAAAA
chr8	8314760	8314761	chr8:8314761:A:G	rs6601689	A	G	A	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr8	8389502	8389503	chr8:8389503:C:G	rs59339218	C	G	C	Hoxd9_MA0913.1	3	1	-	7.932552609785828	5.293940879880877	GCAGTTAAAA
chr8	8389702	8389703	chr8:8389703:T:C	rs2920998	T	C	C	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr8	8451497	8451498	chr8:8451498:T:C	rs2979162	T	C	T	Hoxd9_MA0913.1	4	1	+	8.879672775420401	5.5875385236454225	GCCATAAAAA
chr8	8451503	8451504	chr8:8451504:A:G	rs2976866	A	G	A	Hoxd9_MA0913.1	10	0	+	0	0	.
chr8	8544753	8544754	chr8:8544754:A:T	rs4256595	A	T	T	Hoxd9_MA0913.1	6	1	+	8.60979621184233	6.186476264308344	ACAATAAAAT
chr8	8652562	8652563	chr8:8652563:T:C	rs28583402	T	C	T	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr8	8665318	8665319	chr8:8665319:C:T	rs74404107	C	T	C	Hoxd9_MA0913.1	0	1	-	8.678133135028622	7.73039941161816	GCAATTAAAC
chr8	8800419	8800420	chr8:8800420:T:C	rs17154766	T	C	T	Hoxd9_MA0913.1	27	0	+	0	0	.
chr8	8841976	8841977	chr8:8841977:T:C	rs532334646	T	C	T	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr8	9001377	9001378	chr8:9001378:G:C	rs2979264	G	C	G	Hoxd9_MA0913.1	22	0	+	0	0	.
chr8	9023513	9023514	chr8:9023514:C:G	rs73197706	C	G	C	Hoxd9_MA0913.1	13	0	+	0	0	.
chr8	9050792	9050793	chr8:9050793:G:A	rs4841090	G	A	G	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr8	9186473	9186474	chr8:9186474:C:T	rs11784786	C	T	T	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr8	9197687	9197688	chr8:9197688:A:C	rs559268020	A	C	A	Hoxd9_MA0913.1	20	0	+	0	0	.
chr8	9237662	9237663	chr8:9237663:A:T	rs922706	A	T	A	Hoxd9_MA0913.1	21	0	-	0	0	.
chr8	9318447	9318448	chr8:9318448:C:G	rs330093	C	G	.	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr8	9363708	9363709	chr8:9363709:A:G	rs17661379	A	G	A	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr8	9424244	9424245	chr8:9424245:G:A	rs67963117	G	A	G	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr8	9448995	9448996	chr8:9448996:C:T	rs187494691	C	T	C	Hoxd9_MA0913.1	0	1	-	7.801678332738202	6.853944609327742	GCAATAAACA
chr8	9595911	9595912	chr8:9595912:G:A	rs4416825	G	A	G	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr8	10025116	10025117	chr8:10025117:C:T	rs144152944	C	T	C	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr8	10087959	10087960	chr8:10087960:T:C	rs4841277	T	C	T	Hoxd9_MA0913.1	9	1	-	8.838502353310592	7.3720090125411	GCCATTAAAA
chr8	10271028	10271029	chr8:10271029:A:G	rs2975668	A	G	A	Hoxd9_MA0913.1	3	1	+	8.32301137036169	6.4953924298665875	GCAATAAATA
chr8	10353282	10353283	chr8:10353283:A:G	rs7828605	A	G	A	Hoxd9_MA0913.1	7	1	+	8.323343304007485	1.4841988266531423	CCAATAAAAA
chr8	10782848	10782849	chr8:10782849:C:T	rs10092781	C	T	C	Hoxd9_MA0913.1	1	1	+	8.853608248980283	8.505472621251258	ACAATAAAAA
chr8	10915133	10915134	chr8:10915134:A:T	rs4073948	A	T	T	Hoxd9_MA0913.1	27	0	-	0	0	.
chr8	11250733	11250734	chr8:11250734:T:G	rs920048	T	G	T	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr8	11276595	11276596	chr8:11276596:T:C	rs4840554	T	C	T	Hoxd9_MA0913.1	15	0	+	0	0	.
chr8	11429045	11429046	chr8:11429046:C:T	rs36038555	C	T	C	Hoxd9_MA0913.1	23	0	+	0	0	.
chr8	11452023	11452024	chr8:11452024:A:G	rs36043848	A	G	A	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr8	11452056	11452057	chr8:11452057:G:C	rs28583691	G	C	G	Hoxd9_MA0913.1	27	0	+	0	0	.
chr8	11545173	11545174	chr8:11545174:G:A	rs2245030	G	A	A	Hoxd9_MA0913.1	20	0	-	0	0	.
chr8	11630595	11630596	chr8:11630596:G:A	rs73201424	G	A	G	Hoxd9_MA0913.1	25	0	-	0	0	.
chr8	11630617	11630618	chr8:11630618:T:C	rs2409786	T	C	T	Hoxd9_MA0913.1	3	1	-	8.879672775420401	7.052053834925298	GCCATAAAAA
chr8	11643282	11643283	chr8:11643283:T:A	rs899368	T	A	A	Hoxd9_MA0913.1	24	0	+	0	0	.
chr8	11746500	11746501	chr8:11746501:A:T	rs1484839684	A	T	A	Hoxd9_MA0913.1	28	0	-	0	0	.
chr8	11746516	11746517	chr8:11746517:C:T	rs904006	C	T	T	Hoxd9_MA0913.1	12	0	-	0	0	.
chr8	11768912	11768913	chr8:11768913:C:T	rs8191511	C	T	C	Hoxd9_MA0913.1	11	0	+	0	0	.
chr8	11824315	11824316	chr8:11824316:C:T	rs17756892	C	T	T	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr8	11824328	11824329	chr8:11824329:T:C	rs17149412	T	C	T	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr8	12582985	12582986	chr8:12582986:A:C	rs4483184	A	C	.	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr8	12664858	12664859	chr8:12664859:C:T	rs72496247	C	T	.	Hoxd9_MA0913.1	27	0	+	0	0	.
chr8	12872998	12872999	chr8:12872999:A:G	rs116909118	A	G	A	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr8	12928062	12928063	chr8:12928063:C:T	rs2947355	C	T	C	Hoxd9_MA0913.1	14	0	-	0	0	.
chr8	12936863	12936864	chr8:12936864:A:T	rs12680221	A	T	A	Hoxd9_MA0913.1	14	0	-	0	0	.
chr8	13058328	13058329	chr8:13058329:A:T	rs13273279	A	T	A	Hoxd9_MA0913.1	22	0	+	0	0	.
chr8	13133913	13133914	chr8:13133914:A:G	rs112564636	A	G	A	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr8	13158849	13158850	chr8:13158850:C:A	rs67404687	C	A	A	Hoxd9_MA0913.1	0	1	-	8.287725110553424	5.2505824146005535	GTCATAAAAT
chr8	13158869	13158870	chr8:13158870:G:A	rs67035513	G	A	A	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr8	13297648	13297649	chr8:13297649:C:G	rs11782144	C	G	C	Hoxd9_MA0913.1	9	1	+	8.719303557138431	8.334848631621252	GCAATAAAAC
chr8	13309193	13309194	chr8:13309194:T:C	rs17800601	T	C	C	Hoxd9_MA0913.1	9	1	+	9.51635951314298	8.678133135028622	GCAATTAAAT
chr8	13318622	13318623	chr8:13318623:A:T	rs1671401	A	T	T	Hoxd9_MA0913.1	10	0	-	0	0	.
chr8	13318897	13318898	chr8:13318898:A:G	rs1671400	A	G	A	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr8	13336497	13336498	chr8:13336498:T:G	rs6983961	T	G	T	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr8	13403454	13403455	chr8:13403455:C:G	rs1481675	C	G	C	Hoxd9_MA0913.1	26	0	+	0	0	.
chr8	13454033	13454034	chr8:13454034:C:A	rs1454955	C	A	A	Hoxd9_MA0913.1	13	0	-	0	0	.
chr8	13541364	13541365	chr8:13541365:A:G	rs56359022	A	G	A	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr8	13545837	13545838	chr8:13545838:G:C	rs13272591	G	C	C	Hoxd9_MA0913.1	9	1	+	8.293678209511443	8.678133135028622	GCAATTAAAG
chr8	13650846	13650847	chr8:13650847:A:G	rs75727288	A	G	A	Hoxd9_MA0913.1	9	1	+	8.2283733949328	6.761880054163308	GCAATAAAGA
chr8	13744701	13744702	chr8:13744702:T:C	rs28612696	T	C	T	Hoxd9_MA0913.1	1	1	+	8.371167929409406	8.719303557138431	GTAATAAAAC
chr8	13927434	13927435	chr8:13927435:A:G	rs2682635	A	G	A	Hoxd9_MA0913.1	21	0	+	0	0	.
chr8	13934978	13934979	chr8:13934979:G:A	rs2622477	G	A	A	Hoxd9_MA0913.1	3	1	+	7.932552609785828	9.760171550280933	GCAGTTAAAA
chr8	14331523	14331524	chr8:14331524:C:T	chr8:14331524:C:T	C	T	C	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr8	14412477	14412478	chr8:14412478:A:G	rs28539573	A	G	A	Hoxd9_MA0913.1	8	1	+	8.282172881897674	6.709204304439732	CCAATTAAAA
chr8	14655652	14655653	chr8:14655653:T:C	rs73200885	T	C	T	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr8	14655686	14655687	chr8:14655687:A:G	rs58947477	A	G	A	Hoxd9_MA0913.1	19	0	+	0	0	.
chr8	14655932	14655933	chr8:14655933:T:C	rs11778242	T	C	T	Hoxd9_MA0913.1	18	0	-	0	0	.
chr8	14655959	14655960	chr8:14655960:C:A	rs6982610	C	A	A	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr8	14782936	14782937	chr8:14782937:G:A	rs2253251	G	A	A	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr8	14860213	14860214	chr8:14860214:T:G	rs1350646677	T	G	T	Hoxd9_MA0913.1	16	0	-	0	0	.
chr8	15444045	15444046	chr8:15444046:C:A	rs73191171	C	A	C	Hoxd9_MA0913.1	18	0	+	0	0	.
chr8	15444056	15444057	chr8:15444057:A:G	rs73191173	A	G	A	Hoxd9_MA0913.1	29	0	+	0	0	.
chr8	15505496	15505497	chr8:15505497:C:G	rs7017281	C	G	C	Hoxd9_MA0913.1	17	0	-	0	0	.
chr8	15604838	15604839	chr8:15604839:C:A	rs62504259	C	A	A	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr8	15687418	15687419	chr8:15687419:A:G	rs4590441	A	G	a	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr8	16027616	16027617	chr8:16027617:T:C	rs8181023	T	C	T	Hoxd9_MA0913.1	26	0	+	0	0	.
chr8	16119914	16119915	chr8:16119915:T:C	rs78598946	T	C	T	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr8	16252196	16252197	chr8:16252197:T:C	rs138159101	T	C	T	Hoxd9_MA0913.1	19	0	-	0	0	.
chr8	16284715	16284716	chr8:16284716:A:G	rs4316153	A	G	A	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr8	16409284	16409285	chr8:16409285:T:C	rs77684774	T	C	T	Hoxd9_MA0913.1	2	1	-	8.371167929409406	6.693709487951308	GTAATAAAAC
chr8	16451643	16451644	chr8:16451644:A:C	rs111258386	A	C	a	Hoxd9_MA0913.1	4	1	-	8.853608248980283	5.561473997205303	ACAATAAAAA
chr8	16765563	16765564	chr8:16765564:C:T	rs149188649	C	T	C	Hoxd9_MA0913.1	19	0	+	0	0	.
chr8	17024394	17024395	chr8:17024395:C:G	rs79432701	C	G	C	Hoxd9_MA0913.1	26	0	-	0	0	.
chr8	17118014	17118015	chr8:17118015:G:A	rs74527553	G	A	G	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr8	17162482	17162483	chr8:17162483:G:T	rs1009601414	G	T	G	Hoxd9_MA0913.1	22	0	+	0	0	.
chr8	17265528	17265529	chr8:17265529:A:T	rs902025092	A	T	A	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr8	17347768	17347769	chr8:17347769:A:G	rs11997467	A	G	G	Hoxd9_MA0913.1	10	0	-	0	0	.
chr8	17473013	17473014	chr8:17473014:C:T	rs2588240	C	T	C	Hoxd9_MA0913.1	10	0	-	0	0	.
chr8	17529925	17529926	chr8:17529926:T:C	rs2517243	T	C	T	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr8	17574642	17574643	chr8:17574643:T:C	rs2588169	T	C	C	Hoxd9_MA0913.1	13	0	-	0	0	.
chr8	17661447	17661448	chr8:17661448:C:T	rs10094030	C	T	T	Hoxd9_MA0913.1	21	0	+	0	0	.
chr8	17693073	17693074	chr8:17693074:T:C	rs209974	T	C	T	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr8	17766277	17766278	chr8:17766278:G:T	rs144685294	G	T	G	Hoxd9_MA0913.1	17	0	+	0	0	.
chr8	17769057	17769058	chr8:17769058:T:A	rs9644562	T	A	A	Hoxd9_MA0913.1	19	0	+	0	0	.
chr8	17908755	17908756	chr8:17908756:C:G	rs71526169	C	G	C	Hoxd9_MA0913.1	21	0	+	0	0	.
chr8	18067160	18067161	chr8:18067161:T:C	rs34367186	T	C	T	Hoxd9_MA0913.1	26	0	-	0	0	.
chr8	18067339	18067340	chr8:18067340:C:T	rs12675283	C	T	T	Hoxd9_MA0913.1	1	1	+	8.853608248980283	8.505472621251258	ACAATAAAAA
chr8	18083000	18083001	chr8:18083001:T:A	rs2213909	T	A	T	Hoxd9_MA0913.1	29	0	-	0	0	.
chr8	18097629	18097630	chr8:18097630:A:T	rs7015927	A	T	T	Hoxd9_MA0913.1	10	0	+	0	0	.
chr8	18153536	18153537	chr8:18153537:T:C	rs7009419	T	C	C	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr8	18436594	18436595	chr8:18436595:G:T	rs17693928	G	T	T	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr8	18478289	18478290	chr8:18478290:T:C	rs17595489	T	C	T	Hoxd9_MA0913.1	21	0	+	0	0	.
chr8	18478297	18478298	chr8:18478298:A:G	rs17126660	A	G	A	Hoxd9_MA0913.1	29	0	+	0	0	.
chr8	18575067	18575068	chr8:18575068:C:G	rs2248559	C	G	G	Hoxd9_MA0913.1	1	1	+	7.984561357794846	4.891996345510134	GCAATAAAGT
chr8	18770907	18770908	chr8:18770908:A:T	rs11787013	A	T	A	Hoxd9_MA0913.1	25	0	-	0	0	.
chr8	18814231	18814232	chr8:18814232:T:C	rs2638659	T	C	T	Hoxd9_MA0913.1	28	0	+	0	0	.
chr8	18821194	18821195	chr8:18821195:T:G	rs1022758	T	G	T	Hoxd9_MA0913.1	19	0	-	0	0	.
chr8	19003707	19003708	chr8:19003708:C:T	rs76113926	C	T	T	Hoxd9_MA0913.1	15	0	-	0	0	.
chr8	19003732	19003733	chr8:19003733:C:T	chr8:19003733:C:T	C	T	C	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr8	19176172	19176173	chr8:19176173:T:G	rs71510640	T	G	T	Hoxd9_MA0913.1	16	0	-	0	0	.
chr8	19176175	19176176	chr8:19176176:T:C	rs75089628	T	C	T	Hoxd9_MA0913.1	13	0	-	0	0	.
chr8	19177114	19177115	chr8:19177115:A:G	rs872592	A	G	A	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr8	19184129	19184130	chr8:19184130:G:T	rs28576774	G	T	G	Hoxd9_MA0913.1	17	0	+	0	0	.
chr8	19198707	19198708	chr8:19198708:G:A	rs2410605	G	A	G	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr8	19210042	19210043	chr8:19210043:G:C	rs1027778737	G	C	G	Hoxd9_MA0913.1	24	0	+	0	0	.
chr8	19346891	19346892	chr8:19346892:C:T	rs150901552	C	T	C	Hoxd9_MA0913.1	18	0	+	0	0	.
chr8	19865043	19865044	chr8:19865044:A:G	rs11204079	A	G	G	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr8	19865048	19865049	chr8:19865049:G:T	rs11998681	G	T	T	Hoxd9_MA0913.1	0	1	+	7.4131794346509094	4.37603673869804	GCCATAAAAG
chr8	20170628	20170629	chr8:20170629:C:G	rs7011982	C	G	G	Hoxd9_MA0913.1	17	0	-	0	0	.
chr8	20289503	20289504	chr8:20289504:C:A	rs7017240	C	A	A	Hoxd9_MA0913.1	26	0	+	0	0	.
chr8	20289504	20289505	chr8:20289505:C:G	rs7017248	C	G	G	Hoxd9_MA0913.1	27	0	+	0	0	.
chr8	20561885	20561886	chr8:20561886:C:T	rs7824498	C	T	T	Hoxd9_MA0913.1	14	0	-	0	0	.
chr8	21129241	21129242	chr8:21129242:T:C	rs58552252	T	C	T	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr8	21558902	21558903	chr8:21558903:T:C	rs77083099	T	C	t	Hoxd9_MA0913.1	24	0	+	0	0	.
chr8	22001572	22001573	chr8:22001573:G:A	rs6988010	G	A	A	Hoxd9_MA0913.1	26	0	-	0	0	.
chr8	22142692	22142693	chr8:22142693:T:C	rs139403293	T	C	T	Hoxd9_MA0913.1	25	0	-	0	0	.
chr8	22216117	22216118	chr8:22216118:A:C	rs7845248	A	C	A	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr8	22590301	22590302	chr8:22590302:T:A	rs73672767	T	A	C	Hoxd9_MA0913.1	12	0	+	0	0	.
chr8	22703684	22703685	chr8:22703685:A:C	rs891752677	A	C	A	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr8	22795656	22795657	chr8:22795657:G:T	rs4872023	G	T	T	Hoxd9_MA0913.1	19	0	+	0	0	.
chr8	22852149	22852150	chr8:22852150:T:C	rs1876875	T	C	T	Hoxd9_MA0913.1	3	1	-	8.323343304007485	6.495724363512382	CCAATAAAAA
chr8	22985605	22985606	chr8:22985606:C:T	rs56896982	C	T	C	Hoxd9_MA0913.1	0	1	-	8.879672775420401	7.931939052009941	GCCATAAAAA
chr8	23162140	23162141	chr8:23162141:T:C	rs7463799	T	C	T	Hoxd9_MA0913.1	18	0	+	0	0	.
chr8	23287254	23287255	chr8:23287255:C:T	rs7828570	C	T	T	Hoxd9_MA0913.1	14	0	-	0	0	.
chr8	23290924	23290925	chr8:23290925:A:G	rs143261064	A	G	A	Hoxd9_MA0913.1	4	1	-	7.4131794346509094	4.12104518287593	GCCATAAAAG
chr8	23330620	23330621	chr8:23330621:C:T	rs76004274	C	T	C	Hoxd9_MA0913.1	16	0	-	0	0	.
chr8	23362204	23362205	chr8:23362205:C:T	rs73224491	C	T	T	Hoxd9_MA0913.1	12	0	+	0	0	.
chr8	23479896	23479897	chr8:23479897:A:G	rs2235116	A	G	G	Hoxd9_MA0913.1	9	1	-	8.60979621184233	7.7715698337279715	ACAATAAAAT
chr8	23479902	23479903	chr8:23479903:T:C	rs62501441	T	C	T	Hoxd9_MA0913.1	3	1	-	8.60979621184233	6.782177271347225	ACAATAAAAT
chr8	23841371	23841372	chr8:23841372:G:T	rs13274949	G	T	G	Hoxd9_MA0913.1	1	1	-	7.932552609785828	5.51273423376057	GCAGTTAAAA
chr8	23850655	23850656	chr8:23850656:G:A	rs77260821	G	A	G	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr8	23850671	23850672	chr8:23850672:C:T	rs118170086	C	T	C	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr8	23860814	23860815	chr8:23860815:G:A	rs1436147	G	A	G	Hoxd9_MA0913.1	8	1	+	8.187202972822991	9.760171550280933	GCAATTAAGA
chr8	24243983	24243984	chr8:24243984:G:A	rs73217046	G	A	G	Hoxd9_MA0913.1	28	0	+	0	0	.
chr8	24395158	24395159	chr8:24395159:A:G	rs138142409	A	G	A	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr8	24573598	24573599	chr8:24573599:G:A	rs78883432	G	A	G	Hoxd9_MA0913.1	0	1	+	9.801341972390743	8.853608248980283	GCAATAAAAA
chr8	24819976	24819977	chr8:24819977:A:G	rs1016446	A	G	G	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr8	24828146	24828147	chr8:24828147:C:T	rs196804	C	T	C	Hoxd9_MA0913.1	16	0	+	0	0	.
chr8	24952431	24952432	chr8:24952432:T:C	rs17052849	T	C	T	Hoxd9_MA0913.1	3	1	-	8.293678209511443	6.466059269016337	GCAATTAAAG
chr8	25121617	25121618	chr8:25121618:C:A	rs7826757	C	A	A	Hoxd9_MA0913.1	22	0	+	0	0	.
chr8	25252528	25252529	chr8:25252529:G:T	rs73216241	G	T	G	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr8	25583675	25583676	chr8:25583676:T:C	rs60818845	T	C	T	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr8	25964054	25964055	chr8:25964055:T:C	rs28669816	T	C	T	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr8	26036082	26036083	chr8:26036083:C:T	rs572386964	C	T	C	Hoxd9_MA0913.1	23	0	-	0	0	.
chr8	26080721	26080722	chr8:26080722:T:G	rs13269936	T	G	T	Hoxd9_MA0913.1	19	0	+	0	0	.
chr8	26248264	26248265	chr8:26248265:C:T	rs2449246	C	T	T	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr8	26497944	26497945	chr8:26497945:G:C	rs328102	G	C	C	Hoxd9_MA0913.1	0	1	+	9.453206344661718	7.97520767627846	GTAATAAAAA
chr8	26577934	26577935	chr8:26577935:C:T	rs114900295	C	T	C	Hoxd9_MA0913.1	14	0	-	0	0	.
chr8	26577945	26577946	chr8:26577946:T:C	rs940911246	T	C	T	Hoxd9_MA0913.1	3	1	-	8.334848631621252	6.507229691126146	GCAATAAAAG
chr8	26595951	26595952	chr8:26595952:G:T	rs11990271	G	T	G	Hoxd9_MA0913.1	24	0	-	0	0	.
chr8	26667440	26667441	chr8:26667441:G:A	rs6987195	G	A	G	Hoxd9_MA0913.1	27	0	-	0	0	.
chr8	26752500	26752501	chr8:26752501:G:A	rs62492165	G	A	G	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr8	26813277	26813278	chr8:26813278:C:T	rs4732897	C	T	T	Hoxd9_MA0913.1	11	0	+	0	0	.
chr8	26931432	26931433	chr8:26931433:A:T	rs7007414	A	T	T	Hoxd9_MA0913.1	17	0	+	0	0	.
chr8	26931443	26931444	chr8:26931444:G:A	rs6986602	G	A	G	Hoxd9_MA0913.1	28	0	+	0	0	.
chr8	26955440	26955441	chr8:26955441:T:C	rs13266760	T	C	c	Hoxd9_MA0913.1	21	0	-	0	0	.
chr8	27036963	27036964	chr8:27036964:G:T	rs10503807	G	T	g	Hoxd9_MA0913.1	2	1	+	7.83890107168488	3.066015481292197	GCGATTAAAT
chr8	27220500	27220501	chr8:27220501:C:T	rs7821066	C	T	c	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr8	27318952	27318953	chr8:27318953:T:G	rs62502390	T	G	g	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr8	27332980	27332981	chr8:27332981:T:C	rs57621320	T	C	t	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr8	27493463	27493464	chr8:27493464:T:C	rs34476881	T	C	T	Hoxd9_MA0913.1	6	1	-	8.32301137036169	1.5075907025823505	GCAATAAATA
chr8	27527358	27527359	chr8:27527359:T:C	rs55872532	T	C	T	Hoxd9_MA0913.1	22	0	-	0	0	.
chr8	27565923	27565924	chr8:27565924:T:C	rs145349893	T	C	T	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr8	27608797	27608798	chr8:27608798:T:C	rs1532278	T	C	C	Hoxd9_MA0913.1	3	1	-	8.187202972822991	6.359584032327886	GCAATTAAGA
chr8	27683872	27683873	chr8:27683873:C:T	rs60868886	C	T	C	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr8	27827821	27827822	chr8:27827822:A:G	rs111966103	A	G	A	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr8	27893842	27893843	chr8:27893843:G:A	rs2685377	G	A	G	Hoxd9_MA0913.1	24	0	-	0	0	.
chr8	27893861	27893862	chr8:27893862:T:C	rs2685376	T	C	C	Hoxd9_MA0913.1	5	1	-	8.371167929409406	2.1495047765135378	GTAATAAAAC
chr8	27927775	27927776	chr8:27927776:C:T	rs143338146	C	T	C	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr8	28369405	28369406	chr8:28369406:C:T	rs760221347	C	T	C	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr8	28369437	28369438	chr8:28369438:C:T	rs6988307	C	T	C	Hoxd9_MA0913.1	29	0	+	0	0	.
chr8	28428824	28428825	chr8:28428825:G:A	rs2270654	G	A	A	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr8	28519356	28519357	chr8:28519357:T:C	rs2435986	T	C	C	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr8	28555066	28555067	chr8:28555067:C:A	rs352436	C	A	A	Hoxd9_MA0913.1	25	0	+	0	0	.
chr8	28615949	28615950	chr8:28615950:G:C	rs13260373	G	C	C	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr8	28730960	28730961	chr8:28730961:T:G	rs140051176	T	G	T	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr8	29091818	29091819	chr8:29091819:T:C	rs4732903	T	C	C	Hoxd9_MA0913.1	20	0	-	0	0	.
chr8	29377979	29377980	chr8:29377980:G:A	rs2637822	G	A	A	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr8	29420072	29420073	chr8:29420073:C:T	rs2670688	C	T	T	Hoxd9_MA0913.1	25	0	+	0	0	.
chr8	29530559	29530560	chr8:29530560:T:G	chr8:29530560:T:G	T	G	T	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr8	29585226	29585227	chr8:29585227:A:T	rs11136082	A	T	A	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr8	29585259	29585260	chr8:29585260:C:A	rs17470582	C	A	C	Hoxd9_MA0913.1	24	0	+	0	0	.
chr8	29585260	29585261	chr8:29585261:G:A	rs116675979	G	A	G	Hoxd9_MA0913.1	25	0	+	0	0	.
chr8	29637368	29637369	chr8:29637369:A:G	rs10109022	A	G	A	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr8	29790400	29790401	chr8:29790401:G:T	rs118026579	G	T	G	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr8	29825549	29825550	chr8:29825550:C:T	rs11782220	C	T	C	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr8	29887846	29887847	chr8:29887847:T:C	rs79494667	T	C	T	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr8	30015878	30015879	chr8:30015879:G:C	rs309851	G	C	G	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr8	30123199	30123200	chr8:30123200:G:A	rs1511167	G	A	G	Hoxd9_MA0913.1	26	0	-	0	0	.
chr8	30329939	30329940	chr8:30329940:G:A	rs10106278	G	A	A	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr8	30446316	30446317	chr8:30446317:A:C	rs4416792	A	C	A	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr8	30578323	30578324	chr8:30578324:C:T	rs28687983	C	T	C	Hoxd9_MA0913.1	17	0	-	0	0	.
chr8	31058157	31058158	chr8:31058158:A:C	rs11574175	A	C	A	Hoxd9_MA0913.1	16	0	+	0	0	.
chr8	31876130	31876131	chr8:31876131:T:G	rs10503895	T	G	T	Hoxd9_MA0913.1	20	0	+	0	0	.
chr8	32108982	32108983	chr8:32108983:A:G	rs12680514	A	G	A	Hoxd9_MA0913.1	28	0	+	0	0	.
chr8	32236613	32236614	chr8:32236614:A:G	rs73578666	A	G	A	Hoxd9_MA0913.1	6	1	+	9.51635951314298	2.7009388453636385	GCAATTAAAT
chr8	32240202	32240203	chr8:32240203:T:C	rs76038144	T	C	t	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr8	32494026	32494027	chr8:32494027:G:C	rs16879481	G	C	G	Hoxd9_MA0913.1	17	0	-	0	0	.
chr8	32661239	32661240	chr8:32661240:G:A	rs2466045	G	A	G	Hoxd9_MA0913.1	13	0	+	0	0	.
chr8	32767309	32767310	chr8:32767310:A:G	rs3735781	A	G	A	Hoxd9_MA0913.1	14	0	-	0	0	.
chr8	32767338	32767339	chr8:32767339:C:A	rs3735782	C	A	C	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr8	32979697	32979698	chr8:32979698:G:T	rs62499670	G	T	G	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr8	33106216	33106217	chr8:33106217:A:C	rs147595062	A	C	A	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr8	33414170	33414171	chr8:33414171:G:A	rs10093785	G	A	G	Hoxd9_MA0913.1	2	1	+	8.082713108822833	9.760171550280933	GCGATTAAAA
chr8	33513220	33513221	chr8:33513221:A:C	rs80105855	A	C	A	Hoxd9_MA0913.1	9	1	+	8.2283733949328	7.146334979680488	GCAATAAAGA
chr8	33513238	33513239	chr8:33513239:G:A	rs2732288	G	A	G	Hoxd9_MA0913.1	27	0	+	0	0	.
chr8	33514026	33514027	chr8:33514027:A:T	rs2083494	A	T	T	Hoxd9_MA0913.1	13	0	-	0	0	.
chr8	33514033	33514034	chr8:33514034:T:A	rs3098658	T	A	T	Hoxd9_MA0913.1	6	1	-	8.838502353310592	6.415182405776607	GCCATTAAAA
chr8	33514036	33514037	chr8:33514037:T:C	rs182145165	T	C	T	Hoxd9_MA0913.1	3	1	-	8.838502353310592	7.010883412815486	GCCATTAAAA
chr8	33598185	33598186	chr8:33598186:G:C	rs59024307	G	C	G	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr8	33600942	33600943	chr8:33600943:A:C	rs559108455	A	C	A	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr8	34371798	34371799	chr8:34371799:A:G	rs2590469	A	G	A	Hoxd9_MA0913.1	29	0	-	0	0	.
chr8	34462575	34462576	chr8:34462576:T:C	rs7840167	T	C	T	Hoxd9_MA0913.1	26	0	-	0	0	.
chr8	34665607	34665608	chr8:34665608:T:C	rs6985959	T	C	C	Hoxd9_MA0913.1	22	0	-	0	0	.
chr8	34692716	34692717	chr8:34692717:C:T	rs13261872	C	T	T	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr8	34922990	34922991	chr8:34922991:A:G	rs4237080	A	G	G	Hoxd9_MA0913.1	9	1	+	8.2283733949328	6.761880054163308	GCAATAAAGA
chr8	35120120	35120121	chr8:35120121:C:A	rs2218870	C	A	C	Hoxd9_MA0913.1	19	0	-	0	0	.
chr8	35209600	35209601	chr8:35209601:G:A	rs6997817	G	A	G	Hoxd9_MA0913.1	22	0	+	0	0	.
chr8	36873735	36873736	chr8:36873736:T:C	chr8:36873736:T:C	T	C	T	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr8	36915560	36915561	chr8:36915561:T:C	rs79527440	T	C	T	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr8	37275027	37275028	chr8:37275028:G:A	rs391449	G	A	G	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr8	37503235	37503236	chr8:37503236:C:A	rs55968252	C	A	C	Hoxd9_MA0913.1	13	0	+	0	0	.
chr8	37526680	37526681	chr8:37526681:C:G	rs7832180	C	G	G	Hoxd9_MA0913.1	20	0	-	0	0	.
chr8	37540390	37540391	chr8:37540391:G:T	rs865784997	G	T	G	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr8	37561811	37561812	chr8:37561812:C:T	rs1022328929	C	T	C	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr8	37625244	37625245	chr8:37625245:A:G	rs6468431	A	G	A	Hoxd9_MA0913.1	25	0	-	0	0	.
chr8	38034438	38034439	chr8:38034439:C:T	rs117589844	C	T	C	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr8	38175485	38175486	chr8:38175486:A:C	rs17435276	A	C	A	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr8	38653108	38653109	chr8:38653109:G:A	chr8:38653109:G:A	G	A	G	Hoxd9_MA0913.1	15	0	+	0	0	.
chr8	38825012	38825013	chr8:38825013:T:C	rs1971400	T	C	T	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr8	39028185	39028186	chr8:39028186:G:A	rs7006535	G	A	G	Hoxd9_MA0913.1	0	1	+	9.453206344661718	8.505472621251258	GTAATAAAAA
chr8	39224240	39224241	chr8:39224241:G:T	rs75033978	G	T	G	Hoxd9_MA0913.1	14	0	+	0	0	.
chr8	39346988	39346989	chr8:39346989:A:G	rs4529431	A	G	G	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr8	39487270	39487271	chr8:39487271:C:G	rs145434906	C	G	C	Hoxd9_MA0913.1	17	0	-	0	0	.
chr8	39487294	39487295	chr8:39487295:T:A	rs74618545	T	A	A	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr8	39487304	39487305	chr8:39487305:A:G	rs78530007	A	G	G	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr8	39533296	39533297	chr8:39533297:C:T	rs67882526	C	T	.	Hoxd9_MA0913.1	27	0	+	0	0	.
chr8	40013294	40013295	chr8:40013295:T:C	rs2955895	T	C	C	Hoxd9_MA0913.1	22	0	+	0	0	.
chr8	40156644	40156645	chr8:40156645:C:T	rs908785510	C	T	C	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr8	40156990	40156991	chr8:40156991:C:A	rs73674782	C	A	C	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr8	40336209	40336210	chr8:40336210:A:G	rs74586447	A	G	A	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr8	40418418	40418419	chr8:40418419:T:C	rs956686	T	C	T	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr8	40602216	40602217	chr8:40602217:T:C	rs1031384	T	C	T	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr8	40734305	40734306	chr8:40734306:A:G	rs4554450	A	G	G	Hoxd9_MA0913.1	22	0	+	0	0	.
chr8	40924465	40924466	chr8:40924466:G:A	rs72632916	G	A	G	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr8	41064323	41064324	chr8:41064324:C:A	rs112170242	C	A	-	Hoxd9_MA0913.1	22	0	+	0	0	.
chr8	41152827	41152828	chr8:41152828:G:T	rs979325747	G	T	G	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr8	41361231	41361232	chr8:41361232:T:G	rs16890476	T	G	T	Hoxd9_MA0913.1	29	0	+	0	0	.
chr8	41456874	41456875	chr8:41456875:C:T	rs186831486	C	T	C	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr8	41827984	41827985	chr8:41827985:C:A	rs115547324	C	A	C	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr8	41958870	41958871	chr8:41958871:T:C	rs117669248	T	C	T	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr8	42104795	42104796	chr8:42104796:A:T	rs59462321	A	T	A	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr8	42111364	42111365	chr8:42111365:T:C	rs59629816	T	C	t	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr8	46072445	46072446	chr8:46072446:G:A	rs146819710	G	A	.	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr8	46265678	46265679	chr8:46265679:G:A	rs566858923	G	A	.	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr8	46403513	46403514	chr8:46403514:G:A	rs7293707	G	A	.	Hoxd9_MA0913.1	18	0	+	0	0	.
chr8	47540232	47540233	chr8:47540233:G:A	rs62539108	G	A	G	Hoxd9_MA0913.1	19	0	+	0	0	.
chr8	48399723	48399724	chr8:48399724:T:C	rs871920	T	C	C	Hoxd9_MA0913.1	15	0	+	0	0	.
chr8	48408836	48408837	chr8:48408837:T:A	chr8:48408837:T:A	T	A	T	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr8	48428181	48428182	chr8:48428182:A:C	rs988493230	A	C	A	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr8	48535364	48535365	chr8:48535365:G:A	rs75993855	G	A	G	Hoxd9_MA0913.1	28	0	+	0	0	.
chr8	48764076	48764077	chr8:48764077:C:A	rs6472028	C	A	C	Hoxd9_MA0913.1	18	0	-	0	0	.
chr8	48979308	48979309	chr8:48979309:A:G	rs10109165	A	G	A	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr8	49728711	49728712	chr8:49728712:G:A	rs6472660	G	A	G	Hoxd9_MA0913.1	0	1	+	7.801678332738202	6.853944609327742	GCAATAAACA
chr8	49802781	49802782	chr8:49802782:C:A	rs10957620	C	A	C	Hoxd9_MA0913.1	12	0	+	0	0	.
chr8	49980923	49980924	chr8:49980924:G:T	rs2129167	G	T	G	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr8	50213032	50213033	chr8:50213033:A:G	rs1450130	A	G	A	Hoxd9_MA0913.1	11	0	-	0	0	.
chr8	50213053	50213054	chr8:50213054:A:G	rs112858380	A	G	A	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr8	50641513	50641514	chr8:50641514:C:A	rs11786241	C	A	C	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr8	50843813	50843814	chr8:50843814:T:C	rs4873479	T	C	C	Hoxd9_MA0913.1	3	1	-	7.801678332738202	5.974059392243097	GCAATAAACA
chr8	51115704	51115705	chr8:51115705:C:T	rs7841651	C	T	C	Hoxd9_MA0913.1	22	0	-	0	0	.
chr8	51453739	51453740	chr8:51453740:A:G	rs7833909	A	G	A	Hoxd9_MA0913.1	3	1	+	8.282172881897674	6.454553941402571	CCAATTAAAA
chr8	51700117	51700118	chr8:51700118:G:A	rs13439031	G	A	A	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr8	51734565	51734566	chr8:51734566:G:A	rs116999154	G	A	G	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr8	51771679	51771680	chr8:51771680:T:G	rs4321994	T	G	G	Hoxd9_MA0913.1	4	1	+	8.853608248980283	5.561473997205303	ACAATAAAAA
chr8	51897862	51897863	chr8:51897863:A:G	rs1517306	A	G	A	Hoxd9_MA0913.1	29	0	+	0	0	.
chr8	51898083	51898084	chr8:51898084:A:C	rs6473663	A	C	C	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr8	52251564	52251565	chr8:52251565:C:T	rs16917564	C	T	C	Hoxd9_MA0913.1	16	0	+	0	0	.
chr8	52424372	52424373	chr8:52424373:G:A	rs34006528	G	A	G	Hoxd9_MA0913.1	0	1	+	8.838502353310592	7.890768629900132	GCCATTAAAA
chr8	52631484	52631485	chr8:52631485:G:A	rs118111473	G	A	G	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr8	52737108	52737109	chr8:52737109:G:A	rs143651886	G	A	G	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr8	52985914	52985915	chr8:52985915:A:T	rs77590468	A	T	A	Hoxd9_MA0913.1	12	0	+	0	0	.
chr8	53104557	53104558	chr8:53104558:A:T	rs12678085	A	T	T	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr8	53554022	53554023	chr8:53554023:T:C	rs11987218	T	C	t	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr8	53666596	53666597	chr8:53666597:T:C	rs6980711	T	C	C	Hoxd9_MA0913.1	19	0	-	0	0	.
chr8	53666617	53666618	chr8:53666618:A:C	rs7014660	A	C	C	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr8	53873129	53873130	chr8:53873130:C:T	rs74775936	C	T	C	Hoxd9_MA0913.1	10	0	-	0	0	.
chr8	53895987	53895988	chr8:53895988:G:C	rs13268288	G	C	C	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr8	54100577	54100578	chr8:54100578:A:C	rs144851479	A	C	A	Hoxd9_MA0913.1	12	0	-	0	0	.
chr8	54508371	54508372	chr8:54508372:A:T	rs112294296	A	T	A	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr8	54573094	54573095	chr8:54573095:A:T	rs11787436	A	T	A	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr8	54608338	54608339	chr8:54608339:G:A	rs2375549	G	A	g	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr8	54617051	54617052	chr8:54617052:A:G	rs145290	A	G	A	Hoxd9_MA0913.1	5	1	+	8.2283733949328	2.006710242036932	GCAATAAAGA
chr8	54773767	54773768	chr8:54773768:A:T	rs139096789	A	T	A	Hoxd9_MA0913.1	20	0	-	0	0	.
chr8	54780219	54780220	chr8:54780220:T:C	rs1955304	T	C	C	Hoxd9_MA0913.1	8	1	-	9.168223885413955	7.595255307956012	GTAATTAAAT
chr8	54897171	54897172	chr8:54897172:G:A	rs73589685	G	A	G	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr8	54908044	54908045	chr8:54908045:G:A	rs6473956	G	A	A	Hoxd9_MA0913.1	20	0	-	0	0	.
chr8	55537692	55537693	chr8:55537693:T:C	rs11987926	T	C	T	Hoxd9_MA0913.1	16	0	+	0	0	.
chr8	56041808	56041809	chr8:56041809:C:T	rs2667993	C	T	T	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr8	56062783	56062784	chr8:56062784:T:C	rs182482245	T	C	T	Hoxd9_MA0913.1	19	0	+	0	0	.
chr8	56296290	56296291	chr8:56296291:A:G	rs7833143	A	G	G	Hoxd9_MA0913.1	23	0	+	0	0	.
chr8	56454291	56454292	chr8:56454292:T:G	rs28622985	T	G	T	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr8	56454302	56454303	chr8:56454303:A:G	rs34079032	A	G	A	Hoxd9_MA0913.1	8	1	+	7.7976343601680895	6.224665782710147	GCCATAAAAC
chr8	56548666	56548667	chr8:56548667:T:G	rs2610027	T	G	G	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr8	56821020	56821021	chr8:56821021:C:T	chr8:56821021:C:T	C	T	C	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr8	57212230	57212231	chr8:57212231:C:G	rs74645505	C	G	C	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr8	58322123	58322124	chr8:58322124:T:A	rs56122902	T	A	T	Hoxd9_MA0913.1	13	0	+	0	0	.
chr8	58366341	58366342	chr8:58366342:T:C	rs6471710	T	C	T	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr8	58386037	58386038	chr8:58386038:A:G	rs75867765	A	G	A	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr8	58699483	58699484	chr8:58699484:G:T	rs78765470	G	T	G	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr8	59017704	59017705	chr8:59017705:G:T	rs10504277	G	T	G	Hoxd9_MA0913.1	1	1	-	7.932552609785828	5.51273423376057	GCAGTTAAAA
chr8	59030705	59030706	chr8:59030706:A:G	rs149028093	A	G	A	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr8	59066474	59066475	chr8:59066475:A:G	rs17304270	A	G	A	Hoxd9_MA0913.1	21	0	+	0	0	.
chr8	59145656	59145657	chr8:59145657:C:A	rs74795559	C	A	C	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr8	59373284	59373285	chr8:59373285:T:C	rs57833860	T	C	T	Hoxd9_MA0913.1	23	0	-	0	0	.
chr8	59627586	59627587	chr8:59627587:A:C	rs17318199	A	C	A	Hoxd9_MA0913.1	4	1	-	9.453206344661718	6.161072092886739	GTAATAAAAA
chr8	59695976	59695977	chr8:59695977:C:T	rs111759177	C	T	c	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr8	60052345	60052346	chr8:60052346:A:C	rs34704157	A	C	A	Hoxd9_MA0913.1	3	1	+	8.60979621184233	4.143565541442273	ACAATAAAAT
chr8	60232939	60232940	chr8:60232940:G:A	rs13262241	G	A	G	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr8	60503366	60503367	chr8:60503367:G:A	rs11995549	G	A	G	Hoxd9_MA0913.1	0	1	+	8.246554688443613	7.298820965033153	GTCATTAAAT
chr8	60709088	60709089	chr8:60709089:G:C	rs755523590	G	C	G	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr8	60872391	60872392	chr8:60872392:A:G	rs533518682	A	G	A	Hoxd9_MA0913.1	9	1	-	8.60979621184233	7.7715698337279715	ACAATAAAAT
chr8	60961938	60961939	chr8:60961939:T:C	rs10086776	T	C	T	Hoxd9_MA0913.1	9	1	-	8.853608248980283	7.387114908210791	ACAATAAAAA
chr8	61166796	61166797	chr8:61166797:T:C	rs3852340	T	C	T	Hoxd9_MA0913.1	1	1	+	9.209394307523764	9.55752993525279	GTAATAAAAT
chr8	61774255	61774256	chr8:61774256:T:G	rs11988730	T	G	T	Hoxd9_MA0913.1	5	1	-	9.453206344661718	6.018404573292349	GTAATAAAAA
chr8	61803596	61803597	chr8:61803597:C:T	rs11787163	C	T	C	Hoxd9_MA0913.1	21	0	-	0	0	.
chr8	61957365	61957366	chr8:61957366:A:G	rs592754	A	G	G	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr8	62388876	62388877	chr8:62388877:G:C	rs4738969	G	C	C	Hoxd9_MA0913.1	24	0	+	0	0	.
chr8	62423779	62423780	chr8:62423780:T:C	rs16928902	T	C	T	Hoxd9_MA0913.1	5	1	-	9.453206344661718	3.2315431917658497	GTAATAAAAA
chr8	62423798	62423799	chr8:62423799:T:A	rs16928904	T	A	T	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr8	62523379	62523380	chr8:62523380:G:A	rs575857484	G	A	G	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr8	62699366	62699367	chr8:62699367:G:T	rs4738995	G	T	G	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr8	62786724	62786725	chr8:62786725:A:G	rs6994998	A	G	A	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr8	63220388	63220389	chr8:63220389:T:G	rs1051231126	T	G	t	Hoxd9_MA0913.1	14	0	-	0	0	.
chr8	63823821	63823822	chr8:63823822:T:G	rs705985	T	G	T	Hoxd9_MA0913.1	10	0	-	0	0	.
chr8	64009428	64009429	chr8:64009429:C:T	rs66830107	C	T	C	Hoxd9_MA0913.1	17	0	+	0	0	.
chr8	64224487	64224488	chr8:64224488:G:A	rs544549567	G	A	G	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr8	64569084	64569085	chr8:64569085:C:G	rs55730348	C	G	C	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr8	65540189	65540190	chr8:65540190:A:T	rs35859859	A	T	A	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr8	66533695	66533696	chr8:66533696:G:C	rs568361714	G	C	G	Hoxd9_MA0913.1	13	0	+	0	0	.
chr8	67403935	67403936	chr8:67403936:G:A	rs66993446	G	A	g	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr8	67778862	67778863	chr8:67778863:A:G	rs140527427	A	G	A	Hoxd9_MA0913.1	16	0	-	0	0	.
chr8	67778882	67778883	chr8:67778883:G:A	rs79756378	G	A	G	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr8	68079460	68079461	chr8:68079461:A:G	rs6994956	A	G	A	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr8	68709098	68709099	chr8:68709099:A:G	rs113093505	A	G	A	Hoxd9_MA0913.1	10	0	-	0	0	.
chr8	68908175	68908176	chr8:68908176:T:A	chr8:68908176:T:A	T	A	T	Hoxd9_MA0913.1	28	0	-	0	0	.
chr8	69098909	69098910	chr8:69098910:T:A	rs674661	T	A	T	Hoxd9_MA0913.1	15	0	+	0	0	.
chr8	69275354	69275355	chr8:69275355:A:C	rs169514	A	C	A	Hoxd9_MA0913.1	11	0	-	0	0	.
chr8	69506778	69506779	chr8:69506779:C:T	rs1441199	C	T	C	Hoxd9_MA0913.1	20	0	-	0	0	.
chr8	69561858	69561859	chr8:69561859:C:T	rs10957499	C	T	C	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr8	69633223	69633224	chr8:69633224:A:G	rs17721456	A	G	A	Hoxd9_MA0913.1	24	0	-	0	0	.
chr8	69633227	69633228	chr8:69633228:T:C	rs531922557	T	C	T	Hoxd9_MA0913.1	20	0	-	0	0	.
chr8	69664263	69664264	chr8:69664264:A:G	rs11776420	A	G	A	Hoxd9_MA0913.1	19	0	+	0	0	.
chr8	69668040	69668041	chr8:69668041:A:G	rs56021747	A	G	A	Hoxd9_MA0913.1	24	0	+	0	0	.
chr8	69725922	69725923	chr8:69725923:A:G	rs2933028	A	G	A	Hoxd9_MA0913.1	16	0	-	0	0	.
chr8	69725955	69725956	chr8:69725956:A:C	rs2959551	A	C	C	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr8	69764176	69764177	chr8:69764177:T:A	rs35617319	T	A	A	Hoxd9_MA0913.1	3	1	-	7.4131794346509094	3.7988395655219263	GCCATAAAAG
chr8	69979317	69979318	chr8:69979318:G:C	rs141913328	G	C	C	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr8	70188436	70188437	chr8:70188437:A:C	rs73684215	A	C	C	Hoxd9_MA0913.1	6	1	+	8.32301137036169	3.848434507693486	GCAATAAATA
chr8	70207977	70207978	chr8:70207978:G:A	rs4737301	G	A	g	Hoxd9_MA0913.1	26	0	+	0	0	.
chr8	70401261	70401262	chr8:70401262:A:G	rs78249000	A	G	A	Hoxd9_MA0913.1	5	1	+	7.801678332738202	1.5800151798423334	GCAATAAACA
chr8	70416423	70416424	chr8:70416424:C:T	rs116932847	C	T	C	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr8	70663287	70663288	chr8:70663288:A:C	rs62531758	A	C	A	Hoxd9_MA0913.1	23	0	-	0	0	.
chr8	71011005	71011006	chr8:71011006:G:A	rs2201249	G	A	A	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr8	71011409	71011410	chr8:71011410:A:T	rs2732105	A	T	A	Hoxd9_MA0913.1	5	1	+	8.853608248980283	8.812437826870472	ACAATAAAAA
chr8	71302886	71302887	chr8:71302887:T:C	rs4738126	T	C	C	Hoxd9_MA0913.1	9	1	-	8.838502353310592	7.3720090125411	GCCATTAAAA
chr8	71380351	71380352	chr8:71380352:C:T	rs4991760	C	T	T	Hoxd9_MA0913.1	21	0	-	0	0	.
chr8	71740831	71740832	chr8:71740832:T:C	rs9657037	T	C	C	Hoxd9_MA0913.1	27	0	-	0	0	.
chr8	71810908	71810909	chr8:71810909:G:T	rs368931233	G	T	G	Hoxd9_MA0913.1	26	0	-	0	0	.
chr8	71921280	71921281	chr8:71921281:C:T	rs34774417	C	T	C	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr8	72009306	72009307	chr8:72009307:C:G	rs118160015	C	G	C	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr8	72539239	72539240	chr8:72539240:C:T	rs349358	C	T	T	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr8	73890623	73890624	chr8:73890624:C:T	rs35204486	C	T	C	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr8	73978928	73978929	chr8:73978929:A:G	rs75674446	A	G	A	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr8	74461966	74461967	chr8:74461967:T:C	rs117083370	T	C	T	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr8	74640919	74640920	chr8:74640920:A:G	rs75213681	A	G	A	Hoxd9_MA0913.1	3	1	+	8.490366725581566	6.662747785086463	GTCATTAAAA
chr8	74707587	74707588	chr8:74707588:A:C	rs16938938	A	C	A	Hoxd9_MA0913.1	5	1	-	7.932552609785828	1.7520598789997708	GCAGTTAAAA
chr8	74749298	74749299	chr8:74749299:T:C	rs4735772	T	C	T	Hoxd9_MA0913.1	3	1	-	7.4131794346509094	5.585560494155805	GCCATAAAAG
chr8	74982271	74982272	chr8:74982272:G:A	rs76993047	G	A	G	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr8	75322281	75322282	chr8:75322282:G:T	rs111615568	G	T	G	Hoxd9_MA0913.1	12	0	+	0	0	.
chr8	75480272	75480273	chr8:75480273:G:A	rs34224212	G	A	A	Hoxd9_MA0913.1	14	0	-	0	0	.
chr8	75707499	75707500	chr8:75707500:T:C	rs7844131	T	C	T	Hoxd9_MA0913.1	24	0	-	0	0	.
chr8	75749868	75749869	chr8:75749869:C:A	rs117918628	C	A	C	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr8	76230934	76230935	chr8:76230935:A:C	rs977101258	A	C	A	Hoxd9_MA0913.1	7	1	+	8.853608248980283	5.559761497261851	ACAATAAAAA
chr8	76525466	76525467	chr8:76525467:T:C	rs16939290	T	C	T	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr8	76670912	76670913	chr8:76670913:T:G	rs6988755	T	G	G	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr8	76995906	76995907	chr8:76995907:T:C	rs6994559	T	C	T	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr8	77026738	77026739	chr8:77026739:G:A	rs112616781	G	A	G	Hoxd9_MA0913.1	27	0	+	0	0	.
chr8	77207454	77207455	chr8:77207455:T:C	rs981399	T	C	C	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr8	77218511	77218512	chr8:77218512:G:A	rs28534373	G	A	G	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr8	77294857	77294858	chr8:77294858:C:T	rs143335539	C	T	C	Hoxd9_MA0913.1	0	1	-	8.371167929409406	7.423434205998946	GTAATAAAAC
chr8	78115019	78115020	chr8:78115020:A:G	rs10099895	A	G	G	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr8	78892383	78892384	chr8:78892384:A:G	rs4739144	A	G	G	Hoxd9_MA0913.1	11	0	+	0	0	.
chr8	79170153	79170154	chr8:79170154:G:A	rs61640727	G	A	A	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr8	79615888	79615889	chr8:79615889:T:C	rs10216852	T	C	T	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr8	79616737	79616738	chr8:79616738:G:A	rs7013510	G	A	A	Hoxd9_MA0913.1	13	0	-	0	0	.
chr8	79955647	79955648	chr8:79955648:G:A	chr8:79955648:G:A	G	A	G	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr8	80107946	80107947	chr8:80107947:T:C	rs4740110	T	C	C	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr8	80137144	80137145	chr8:80137145:T:A	rs12678235	T	A	T	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr8	80143411	80143412	chr8:80143412:G:A	rs112752084	G	A	G	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr8	80146740	80146741	chr8:80146741:T:C	rs4740121	T	C	C	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr8	80149212	80149213	chr8:80149213:C:T	rs62516124	C	T	C	Hoxd9_MA0913.1	18	0	+	0	0	.
chr8	80167371	80167372	chr8:80167372:C:T	rs2033069	C	T	T	Hoxd9_MA0913.1	17	0	-	0	0	.
chr8	80209855	80209856	chr8:80209856:C:G	rs57185760	C	G	C	Hoxd9_MA0913.1	0	1	-	7.801678332738202	6.323679664354945	GCAATAAACA
chr8	80218769	80218770	chr8:80218770:A:G	rs59572869	A	G	a	Hoxd9_MA0913.1	20	0	+	0	0	.
chr8	80297377	80297378	chr8:80297378:G:A	rs143551461	G	A	G	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr8	80423044	80423045	chr8:80423045:C:T	rs272605	C	T	T	Hoxd9_MA0913.1	28	0	+	0	0	.
chr8	80698980	80698981	chr8:80698981:A:G	rs74984302	A	G	A	Hoxd9_MA0913.1	6	1	+	7.4131794346509094	0.5977587668715694	GCCATAAAAG
chr8	81080504	81080505	chr8:81080505:T:C	rs1257830473	T	C	T	Hoxd9_MA0913.1	15	0	+	0	0	.
chr8	81099836	81099837	chr8:81099837:T:C	rs9987151	T	C	T	Hoxd9_MA0913.1	27	0	-	0	0	.
chr8	81099858	81099859	chr8:81099859:T:C	rs12546914	T	C	T	Hoxd9_MA0913.1	5	1	-	7.4131794346509094	1.1915162817550413	GCCATAAAAG
chr8	81141192	81141193	chr8:81141193:G:T	rs115634126	G	T	G	Hoxd9_MA0913.1	9	1	+	8.293678209511443	9.51635951314298	GCAATTAAAG
chr8	81424513	81424514	chr8:81424514:G:A	rs55805496	G	A	G	Hoxd9_MA0913.1	23	0	+	0	0	.
chr8	81478008	81478009	chr8:81478009:C:G	rs10109480	C	G	C	Hoxd9_MA0913.1	1	1	+	8.60979621184233	5.517231199557616	ACAATAAAAT
chr8	81672454	81672455	chr8:81672455:C:G	chr8:81672455:C:G	C	G	C	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr8	81838730	81838731	chr8:81838731:A:G	rs56400334	A	G	A	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr8	81883644	81883645	chr8:81883645:G:A	rs6983754	G	A	A	Hoxd9_MA0913.1	29	0	+	0	0	.
chr8	81941557	81941558	chr8:81941558:C:A	rs10091532	C	A	C	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr8	82002800	82002801	chr8:82002801:G:A	rs6989354	G	A	G	Hoxd9_MA0913.1	12	0	-	0	0	.
chr8	82200502	82200503	chr8:82200503:A:G	rs78585086	A	G	A	Hoxd9_MA0913.1	7	1	+	8.531537147691377	1.6923926703370344	GTCATAAAAA
chr8	82354042	82354043	chr8:82354043:G:T	rs2045977	G	T	G	Hoxd9_MA0913.1	22	0	-	0	0	.
chr8	82401256	82401257	chr8:82401257:A:G	rs13266260	A	G	G	Hoxd9_MA0913.1	27	0	+	0	0	.
chr8	82843681	82843682	chr8:82843682:A:G	rs7833997	A	G	a	Hoxd9_MA0913.1	21	0	+	0	0	.
chr8	82913714	82913715	chr8:82913715:T:C	rs530634087	T	C	T	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr8	83042528	83042529	chr8:83042529:T:C	rs13271847	T	C	T	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr8	83073730	83073731	chr8:83073731:A:T	rs2122345	A	T	A	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr8	83130205	83130206	chr8:83130206:A:G	rs1193103700	A	G	A	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr8	83130231	83130232	chr8:83130232:A:G	rs4294179	A	G	A	Hoxd9_MA0913.1	20	0	+	0	0	.
chr8	83429621	83429622	chr8:83429622:C:A	rs7815567	C	A	A	Hoxd9_MA0913.1	27	0	+	0	0	.
chr8	83573930	83573931	chr8:83573931:G:A	rs979021073	G	A	G	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr8	84070250	84070251	chr8:84070251:T:C	rs34756801	T	C	T	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr8	84109920	84109921	chr8:84109921:T:C	rs1055499973	T	C	T	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr8	84273491	84273492	chr8:84273492:C:G	rs145005357	C	G	G	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr8	84335901	84335902	chr8:84335902:C:A	rs77519151	C	A	C	Hoxd9_MA0913.1	1	1	+	7.943390935685037	5.523572559659778	GCAATTAAGT
chr8	84659061	84659062	chr8:84659062:G:A	rs2029358	G	A	G	Hoxd9_MA0913.1	22	0	-	0	0	.
chr8	84806458	84806459	chr8:84806459:C:A	rs111652921	C	A	C	Hoxd9_MA0913.1	11	0	-	0	0	.
chr8	85741112	85741113	chr8:85741113:T:A	rs866570412	T	A	t	Hoxd9_MA0913.1	9	1	-	7.801678332738202	7.557866295600249	GCAATAAACA
chr8	85848823	85848824	chr8:85848824:G:A	rs13257391	G	A	G	Hoxd9_MA0913.1	26	0	+	0	0	.
chr8	86176378	86176379	chr8:86176379:T:C	rs780678313	T	C	T	Hoxd9_MA0913.1	8	1	-	8.282172881897674	6.709204304439732	CCAATTAAAA
chr8	86280595	86280596	chr8:86280596:T:A	rs998854817	T	A	T	Hoxd9_MA0913.1	14	0	-	0	0	.
chr8	86280606	86280607	chr8:86280607:T:C	rs189916742	T	C	T	Hoxd9_MA0913.1	3	1	-	7.984561357794846	6.156942417299742	GCAATAAAGT
chr8	86338404	86338405	chr8:86338405:G:A	rs7462727	G	A	A	Hoxd9_MA0913.1	24	0	-	0	0	.
chr8	86368110	86368111	chr8:86368111:A:G	rs72688569	A	G	A	Hoxd9_MA0913.1	3	1	+	8.853608248980283	7.025989308485178	ACAATAAAAA
chr8	86477949	86477950	chr8:86477950:A:C	rs75459640	A	C	A	Hoxd9_MA0913.1	15	0	-	0	0	.
chr8	86893022	86893023	chr8:86893023:C:G	rs10955093	C	G	C	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr8	87061527	87061528	chr8:87061528:T:C	rs75495130	T	C	T	Hoxd9_MA0913.1	20	0	-	0	0	.
chr8	87413565	87413566	chr8:87413566:A:G	rs13257198	A	G	A	Hoxd9_MA0913.1	8	1	-	8.32301137036169	7.801678332738202	GCAATAAATA
chr8	88484978	88484979	chr8:88484979:A:G	rs143180223	A	G	A	Hoxd9_MA0913.1	3	1	+	8.879672775420401	7.052053834925298	GCCATAAAAA
chr8	89259846	89259847	chr8:89259847:T:C	rs7835496	T	C	C	Hoxd9_MA0913.1	24	0	-	0	0	.
chr8	89602374	89602375	chr8:89602375:G:A	rs17696607	G	A	G	Hoxd9_MA0913.1	16	0	-	0	0	.
chr8	89760271	89760272	chr8:89760272:C:T	rs402886	C	T	T	Hoxd9_MA0913.1	0	1	-	8.490366725581566	7.542633002171106	GTCATTAAAA
chr8	89848340	89848341	chr8:89848341:T:G	rs447768	T	G	G	Hoxd9_MA0913.1	6	1	-	9.51635951314298	5.041782650474773	GCAATTAAAT
chr8	89949283	89949284	chr8:89949284:T:C	rs10109454	T	C	C	Hoxd9_MA0913.1	3	1	-	8.281840948251881	6.454222007756778	GCAATTAATA
chr8	90295255	90295256	chr8:90295256:T:A	rs2879345	T	A	A	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr8	90473349	90473350	chr8:90473350:A:T	rs1028255	A	T	T	Hoxd9_MA0913.1	22	0	-	0	0	.
chr8	90644881	90644882	chr8:90644882:T:G	rs6994987	T	G	G	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr8	90901339	90901340	chr8:90901340:T:C	rs2740802	T	C	C	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr8	91117673	91117674	chr8:91117674:T:C	rs566474970	T	C	T	Hoxd9_MA0913.1	16	0	-	0	0	.
chr8	91275617	91275618	chr8:91275618:C:T	rs62527429	C	T	C	Hoxd9_MA0913.1	0	1	-	8.490366725581566	7.542633002171106	GTCATTAAAA
chr8	92618231	92618232	chr8:92618232:C:T	rs2618127	C	T	T	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr8	93245165	93245166	chr8:93245166:T:G	rs203132	T	G	G	Hoxd9_MA0913.1	22	0	-	0	0	.
chr8	93309307	93309308	chr8:93309308:A:G	rs28379679	A	G	A	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr8	93670513	93670514	chr8:93670514:A:C	rs75254117	A	C	A	Hoxd9_MA0913.1	8	1	+	8.287725110553424	6.2880614709008835	GTCATAAAAT
chr8	93682031	93682032	chr8:93682032:T:A	rs11774118	T	A	t	Hoxd9_MA0913.1	15	0	+	0	0	.
chr8	93837589	93837590	chr8:93837590:G:T	rs10956886	G	T	G	Hoxd9_MA0913.1	25	0	+	0	0	.
chr8	93886148	93886149	chr8:93886149:C:T	rs73692910	C	T	C	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr8	93915758	93915759	chr8:93915759:C:T	rs72668358	C	T	C	Hoxd9_MA0913.1	0	1	-	9.453206344661718	8.505472621251258	GTAATAAAAA
chr8	93935789	93935790	chr8:93935790:C:G	rs73692962	C	G	C	Hoxd9_MA0913.1	13	0	-	0	0	.
chr8	94169714	94169715	chr8:94169715:A:T	rs112802320	A	T	A	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr8	94224560	94224561	chr8:94224561:G:A	rs2613229	G	A	T	Hoxd9_MA0913.1	16	0	+	0	0	.
chr8	94438060	94438061	chr8:94438061:T:C	rs3019281	T	C	T	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr8	94742062	94742063	chr8:94742063:A:G	rs28750318	A	G	G	Hoxd9_MA0913.1	16	0	-	0	0	.
chr8	94814944	94814945	chr8:94814945:C:T	rs4355737	C	T	T	Hoxd9_MA0913.1	2	1	+	8.879672775420401	3.3509979405399606	GCCATAAAAA
chr8	94893805	94893806	chr8:94893806:C:A	rs28399556	C	A	T	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr8	94962732	94962733	chr8:94962733:T:C	rs7823059	T	C	C	Hoxd9_MA0913.1	20	0	-	0	0	.
chr8	94965892	94965893	chr8:94965893:C:G	rs112076731	C	G	C	Hoxd9_MA0913.1	11	0	+	0	0	.
chr8	94968354	94968355	chr8:94968355:G:A	rs77055525	G	A	A	Hoxd9_MA0913.1	15	0	+	0	0	.
chr8	95012840	95012841	chr8:95012841:C:A	rs10110635	C	A	A	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr8	95012864	95012865	chr8:95012865:T:A	rs10100089	T	A	A	Hoxd9_MA0913.1	11	0	+	0	0	.
chr8	95125226	95125227	chr8:95125227:A:G	rs192714	A	G	G	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr8	95217788	95217789	chr8:95217789:G:C	rs74956051	G	C	G	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr8	95451810	95451811	chr8:95451811:A:C	rs6987245	A	C	A	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr8	95818831	95818832	chr8:95818832:G:T	rs538219	G	T	T	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr8	96333131	96333132	chr8:96333132:T:G	rs58891344	T	G	T	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr8	96345224	96345225	chr8:96345225:C:A	rs56138709	C	A	C	Hoxd9_MA0913.1	11	0	-	0	0	.
chr8	96570836	96570837	chr8:96570837:T:A	rs724236	T	A	A	Hoxd9_MA0913.1	7	1	-	8.334848631621252	5.04100187990282	GCAATAAAAG
chr8	96571747	96571748	chr8:96571748:C:T	rs2575710	C	T	C	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr8	96620014	96620015	chr8:96620015:G:T	rs144500822	G	T	G	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr8	96809411	96809412	chr8:96809412:A:G	rs185435006	A	G	A	Hoxd9_MA0913.1	8	1	+	9.55752993525279	7.984561357794846	GCAATAAAAT
chr8	96855788	96855789	chr8:96855789:A:T	rs35664131	A	T	A	Hoxd9_MA0913.1	17	0	+	0	0	.
chr8	96988798	96988799	chr8:96988799:G:A	rs2853273	G	A	A	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr8	97216395	97216396	chr8:97216396:G:A	rs75341736	G	A	G	Hoxd9_MA0913.1	14	0	+	0	0	.
chr8	97695983	97695984	chr8:97695984:T:C	rs79899807	T	C	T	Hoxd9_MA0913.1	2	1	-	7.943390935685037	6.265932494226938	GCAATTAAGT
chr8	97842321	97842322	chr8:97842322:T:C	rs72673467	T	C	t	Hoxd9_MA0913.1	26	0	+	0	0	.
chr8	97867695	97867696	chr8:97867696:A:G	chr8:97867696:A:G	A	G	A	Hoxd9_MA0913.1	11	0	-	0	0	.
chr8	97888540	97888541	chr8:97888541:A:G	rs7831897	A	G	G	Hoxd9_MA0913.1	29	0	-	0	0	.
chr8	97929252	97929253	chr8:97929253:T:C	rs2444902	T	C	C	Hoxd9_MA0913.1	29	0	-	0	0	.
chr8	97929293	97929294	chr8:97929294:T:A	chr8:97929294:T:A	T	A	T	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr8	98136930	98136931	chr8:98136931:A:G	rs149039184	A	G	A	Hoxd9_MA0913.1	3	1	+	8.334848631621252	6.507229691126146	GCAATAAAAG
chr8	98358316	98358317	chr8:98358317:T:C	rs73272040	T	C	T	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr8	98385806	98385807	chr8:98385807:A:C	rs17310375	A	C	A	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr8	98495565	98495566	chr8:98495566:C:T	rs577375298	C	T	C	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr8	98775447	98775448	chr8:98775448:G:A	rs759540530	G	A	G	Hoxd9_MA0913.1	23	0	+	0	0	.
chr8	98811317	98811318	chr8:98811318:A:G	rs72668403	A	G	A	Hoxd9_MA0913.1	19	0	-	0	0	.
chr8	98826387	98826388	chr8:98826388:C:T	rs76416678	C	T	C	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr8	99091726	99091727	chr8:99091727:A:T	rs77002292	A	T	A	Hoxd9_MA0913.1	15	0	-	0	0	.
chr8	99301342	99301343	chr8:99301343:C:G	rs10104264	C	G	g	Hoxd9_MA0913.1	11	0	-	0	0	.
chr8	99636886	99636887	chr8:99636887:G:T	rs35462366	G	T	G	Hoxd9_MA0913.1	27	0	-	0	0	.
chr8	99824133	99824134	chr8:99824134:A:G	rs2290153	A	G	A	Hoxd9_MA0913.1	21	0	+	0	0	.
chr8	99860333	99860334	chr8:99860334:G:C	rs6468699	G	C	G	Hoxd9_MA0913.1	27	0	+	0	0	.
chr8	100038795	100038796	chr8:100038796:C:A	rs930965	C	A	A	Hoxd9_MA0913.1	28	0	-	0	0	.
chr8	100237533	100237534	chr8:100237534:G:T	rs1788189	G	T	T	Hoxd9_MA0913.1	12	0	-	0	0	.
chr8	100314199	100314200	chr8:100314200:A:G	rs1962901	A	G	G	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr8	100336857	100336858	chr8:100336858:C:T	rs11991535	C	T	C	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr8	100630439	100630440	chr8:100630440:C:T	rs7828798	C	T	T	Hoxd9_MA0913.1	14	0	-	0	0	.
chr8	100723321	100723322	chr8:100723322:G:A	rs75109210	G	A	G	Hoxd9_MA0913.1	12	0	+	0	0	.
chr8	100952858	100952859	chr8:100952859:C:T	rs10098502	C	T	C	Hoxd9_MA0913.1	29	0	-	0	0	.
chr8	101026737	101026738	chr8:101026738:T:C	rs79123757	T	C	T	Hoxd9_MA0913.1	19	0	+	0	0	.
chr8	101371286	101371287	chr8:101371287:A:G	rs144710040	A	G	A	Hoxd9_MA0913.1	3	1	+	7.984561357794846	6.156942417299742	GCAATAAAGT
chr8	101394446	101394447	chr8:101394447:T:C	rs16867608	T	C	T	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr8	101602725	101602726	chr8:101602726:G:C	rs2030785	G	C	C	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr8	101635762	101635763	chr8:101635763:A:C	rs112403140	A	C	A	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr8	101737557	101737558	chr8:101737558:G:C	rs7844838	G	C	C	Hoxd9_MA0913.1	27	0	-	0	0	.
chr8	102260327	102260328	chr8:102260328:C:T	rs76140214	C	T	c	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr8	102408009	102408010	chr8:102408010:C:T	rs559218241	C	T	C	Hoxd9_MA0913.1	17	0	+	0	0	.
chr8	102553705	102553706	chr8:102553706:A:G	rs2511760	A	G	G	Hoxd9_MA0913.1	2	1	+	8.282172881897674	6.604714440439576	CCAATTAAAA
chr8	102576651	102576652	chr8:102576652:A:G	rs6998091	A	G	A	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr8	102617799	102617800	chr8:102617800:G:A	rs17186961	G	A	G	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr8	102725859	102725860	chr8:102725860:T:C	rs11995590	T	C	T	Hoxd9_MA0913.1	5	1	-	8.323343304007485	2.101680151111617	CCAATAAAAA
chr8	102790420	102790421	chr8:102790421:C:A	rs2513902	C	A	C	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr8	102877483	102877484	chr8:102877484:A:G	rs17197341	A	G	A	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr8	102886764	102886765	chr8:102886765:A:G	rs62522622	A	G	G	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr8	103076761	103076762	chr8:103076762:T:C	rs74711689	T	C	T	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr8	103078966	103078967	chr8:103078967:G:C	rs17790746	G	C	G	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr8	103353920	103353921	chr8:103353921:T:G	rs3133838	T	G	T	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr8	103760395	103760396	chr8:103760396:A:G	rs17235384	A	G	A	Hoxd9_MA0913.1	17	0	-	0	0	.
chr8	103765490	103765491	chr8:103765491:A:G	rs12546381	A	G	A	Hoxd9_MA0913.1	9	1	+	8.812437826870472	7.34594448610098	ACAATTAAAA
chr8	104606268	104606269	chr8:104606269:C:T	rs117497267	C	T	c	Hoxd9_MA0913.1	10	0	+	0	0	.
chr8	105102943	105102944	chr8:105102944:T:C	rs7819593	T	C	T	Hoxd9_MA0913.1	3	1	-	8.293678209511443	6.466059269016337	GCAATTAAAG
chr8	105424849	105424850	chr8:105424850:G:C	rs56703672	G	C	G	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr8	105535287	105535288	chr8:105535288:G:T	rs4734874	G	T	T	Hoxd9_MA0913.1	1	1	-	8.853608248980283	6.433789872955025	ACAATAAAAA
chr8	105575844	105575845	chr8:105575845:A:G	rs1429015189	A	G	A	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr8	106287089	106287090	chr8:106287090:C:G	rs12676868	C	G	c	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr8	106415248	106415249	chr8:106415249:G:T	rs7012963	G	T	G	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr8	106617485	106617486	chr8:106617486:C:T	rs2045787	C	T	C	Hoxd9_MA0913.1	14	0	-	0	0	.
chr8	106858903	106858904	chr8:106858904:G:A	rs57226265	G	A	A	Hoxd9_MA0913.1	24	0	+	0	0	.
chr8	106935855	106935856	chr8:106935856:A:G	rs981295	A	G	G	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr8	107108488	107108489	chr8:107108489:C:T	rs72668878	C	T	C	Hoxd9_MA0913.1	17	0	+	0	0	.
chr8	107253778	107253779	chr8:107253779:C:T	rs41466146	C	T	C	Hoxd9_MA0913.1	27	0	+	0	0	.
chr8	107480011	107480012	chr8:107480012:A:C	rs1433171	A	C	C	Hoxd9_MA0913.1	25	0	+	0	0	.
chr8	107750568	107750569	chr8:107750569:A:G	rs10808416	A	G	A	Hoxd9_MA0913.1	7	1	+	9.168223885413955	2.3290794080596116	GTAATTAAAT
chr8	107752384	107752385	chr8:107752385:T:C	rs7846633	T	C	C	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr8	107777587	107777588	chr8:107777588:T:C	rs4534106	T	C	T	Hoxd9_MA0913.1	11	0	-	0	0	.
chr8	107850241	107850242	chr8:107850242:A:G	rs7815667	A	G	A	Hoxd9_MA0913.1	2	1	+	9.209394307523764	7.531935866065666	GTAATAAAAT
chr8	108209787	108209788	chr8:108209788:A:G	rs10955481	A	G	A	Hoxd9_MA0913.1	23	0	+	0	0	.
chr8	108468540	108468541	chr8:108468541:A:G	rs981019	A	G	A	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr8	108718416	108718417	chr8:108718417:T:G	rs13256244	T	G	T	Hoxd9_MA0913.1	6	1	-	8.371167929409406	3.896591066741201	GTAATAAAAC
chr8	108718441	108718442	chr8:108718442:G:A	rs13254651	G	A	A	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr8	108753420	108753421	chr8:108753421:A:C	rs3019895	A	C	C	Hoxd9_MA0913.1	5	1	+	8.879672775420401	5.444871004051032	GCCATAAAAA
chr8	108874182	108874183	chr8:108874183:A:G	rs4236794	A	G	G	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr8	109129501	109129502	chr8:109129502:C:A	rs75999359	C	A	C	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr8	109129507	109129508	chr8:109129508:G:A	rs9297421	G	A	G	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr8	109536199	109536200	chr8:109536200:T:C	rs113649142	T	C	T	Hoxd9_MA0913.1	15	0	-	0	0	.
chr8	109536218	109536219	chr8:109536219:G:A	rs7011803	G	A	A	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr8	109541364	109541365	chr8:109541365:G:A	rs7839394	G	A	G	Hoxd9_MA0913.1	23	0	+	0	0	.
chr8	109572196	109572197	chr8:109572197:A:G	rs6988341	A	G	A	Hoxd9_MA0913.1	4	1	-	9.412035922551908	6.119901670776928	GTAATTAAAA
chr8	109584559	109584560	chr8:109584560:T:A	rs995543223	T	A	T	Hoxd9_MA0913.1	27	0	-	0	0	.
chr8	109588331	109588332	chr8:109588332:A:C	rs142444677	A	C	A	Hoxd9_MA0913.1	21	0	-	0	0	.
chr8	109733804	109733805	chr8:109733805:C:T	rs3108877	C	T	T	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr8	110300836	110300837	chr8:110300837:T:C	rs78241959	T	C	T	Hoxd9_MA0913.1	15	0	+	0	0	.
chr8	111237045	111237046	chr8:111237046:G:A	rs73325851	G	A	G	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr8	112051061	112051062	chr8:112051062:C:T	rs62515553	C	T	T	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr8	112525441	112525442	chr8:112525442:C:T	rs34737059	C	T	C	Hoxd9_MA0913.1	26	0	+	0	0	.
chr8	112793717	112793718	chr8:112793718:A:G	rs56880804	A	G	G	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr8	112856484	112856485	chr8:112856485:T:C	rs231305	T	C	T	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr8	113048418	113048419	chr8:113048419:C:G	rs6982602	C	G	G	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr8	113085965	113085966	chr8:113085966:A:G	rs12334875	A	G	a	Hoxd9_MA0913.1	29	0	+	0	0	.
chr8	113572237	113572238	chr8:113572238:G:A	rs56801275	G	A	G	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr8	113807529	113807530	chr8:113807530:T:C	rs13269526	T	C	T	Hoxd9_MA0913.1	2	1	-	8.853608248980283	7.176149807522183	ACAATAAAAA
chr8	114637471	114637472	chr8:114637472:T:C	rs76566674	T	C	T	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr8	114845219	114845220	chr8:114845220:G:A	rs55852346	G	A	G	Hoxd9_MA0913.1	17	0	-	0	0	.
chr8	114945704	114945705	chr8:114945705:A:G	rs28766963	A	G	g	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr8	114952408	114952409	chr8:114952409:A:G	rs1872780	A	G	G	Hoxd9_MA0913.1	29	0	-	0	0	.
chr8	115194387	115194388	chr8:115194388:C:A	rs777809	C	A	C	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr8	115419954	115419955	chr8:115419955:T:C	rs73367435	T	C	T	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr8	115419957	115419958	chr8:115419958:A:C	chr8:115419958:A:C	A	C	A	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr8	115774761	115774762	chr8:115774762:A:G	rs117869703	A	G	A	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr8	116444916	116444917	chr8:116444917:A:G	rs144386501	A	G	A	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr8	116890573	116890574	chr8:116890574:A:G	rs17811924	A	G	A	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr8	117153762	117153763	chr8:117153763:C:T	rs67425784	C	T	C	Hoxd9_MA0913.1	8	1	-	8.2283733949328	9.801341972390743	GCAATAAAGA
chr8	117252979	117252980	chr8:117252980:C:T	rs2705248	C	T	C	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr8	117316333	117316334	chr8:117316334:G:A	rs1793694	G	A	A	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr8	117667121	117667122	chr8:117667122:A:T	rs10093232	A	T	A	Hoxd9_MA0913.1	9	1	+	7.801678332738202	7.557866295600249	GCAATAAACA
chr8	117667170	117667171	chr8:117667171:T:G	rs10108248	T	G	T	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr8	117707101	117707102	chr8:117707102:A:G	rs734650	A	G	A	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr8	117831799	117831800	chr8:117831800:T:C	rs12682457	T	C	T	Hoxd9_MA0913.1	4	1	+	9.55752993525279	6.265395683477809	GCAATAAAAT
chr8	117849653	117849654	chr8:117849654:A:T	rs10098795	A	T	T	Hoxd9_MA0913.1	3	1	+	8.323343304007485	4.709003434878502	CCAATAAAAA
chr8	117850607	117850608	chr8:117850608:T:G	rs10089630	T	G	G	Hoxd9_MA0913.1	25	0	+	0	0	.
chr8	117985173	117985174	chr8:117985174:C:T	rs11987653	C	T	C	Hoxd9_MA0913.1	24	0	+	0	0	.
chr8	118068133	118068134	chr8:118068134:G:A	rs62520112	G	A	A	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr8	118164418	118164419	chr8:118164419:A:G	rs139923816	A	G	A	Hoxd9_MA0913.1	23	0	+	0	0	.
chr8	118256377	118256378	chr8:118256378:C:G	rs181678695	C	G	C	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr8	118392157	118392158	chr8:118392158:G:C	rs6984129	G	C	G	Hoxd9_MA0913.1	29	0	+	0	0	.
chr8	118414718	118414719	chr8:118414719:C:T	rs4876830	C	T	T	Hoxd9_MA0913.1	26	0	+	0	0	.
chr8	118450215	118450216	chr8:118450216:G:C	rs10955887	G	C	G	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr8	118491404	118491405	chr8:118491405:A:C	rs2515020	A	C	A	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr8	118529839	118529840	chr8:118529840:C:T	rs4876851	C	T	c	Hoxd9_MA0913.1	12	0	+	0	0	.
chr8	118929037	118929038	chr8:118929038:A:G	rs4876869	A	G	a	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr8	119070683	119070684	chr8:119070684:G:A	rs72682416	G	A	G	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr8	119070701	119070702	chr8:119070702:A:C	rs13259300	A	C	A	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr8	119070731	119070732	chr8:119070732:T:C	rs13261635	T	C	C	Hoxd9_MA0913.1	29	0	+	0	0	.
chr8	119362293	119362294	chr8:119362294:C:T	rs140243815	C	T	C	Hoxd9_MA0913.1	15	0	-	0	0	.
chr8	119495789	119495790	chr8:119495790:T:A	rs6469828	T	A	T	Hoxd9_MA0913.1	25	0	+	0	0	.
chr8	119625293	119625294	chr8:119625294:T:C	rs28668309	T	C	C	Hoxd9_MA0913.1	4	1	+	8.812437826870472	5.520303575095493	ACAATTAAAA
chr8	119656164	119656165	chr8:119656165:A:C	rs12676423	A	C	C	Hoxd9_MA0913.1	25	0	+	0	0	.
chr8	119667017	119667018	chr8:119667018:C:T	rs10505371	C	T	C	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr8	120089555	120089556	chr8:120089556:G:A	rs4871831	G	A	G	Hoxd9_MA0913.1	0	1	+	9.412035922551908	8.464302199141448	GTAATTAAAA
chr8	120165104	120165105	chr8:120165105:A:G	chr8:120165105:A:G	A	G	A	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr8	120207580	120207581	chr8:120207581:T:C	rs957694	T	C	C	Hoxd9_MA0913.1	16	0	-	0	0	.
chr8	120207586	120207587	chr8:120207587:A:T	rs957695	A	T	T	Hoxd9_MA0913.1	10	0	-	0	0	.
chr8	120622508	120622509	chr8:120622509:A:G	rs4128596	A	G	G	Hoxd9_MA0913.1	25	0	+	0	0	.
chr8	120685563	120685564	chr8:120685564:C:T	rs7009272	C	T	C	Hoxd9_MA0913.1	28	0	+	0	0	.
chr8	120742308	120742309	chr8:120742309:T:A	rs60631202	T	A	A	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr8	120916013	120916014	chr8:120916014:T:C	rs6990987	T	C	C	Hoxd9_MA0913.1	18	0	-	0	0	.
chr8	120922747	120922748	chr8:120922748:A:G	chr8:120922748:A:G	A	G	A	Hoxd9_MA0913.1	5	1	+	8.60979621184233	2.388133058946461	ACAATAAAAT
chr8	121120253	121120254	chr8:121120254:G:A	rs76565944	G	A	G	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr8	121191474	121191475	chr8:121191475:T:G	rs4579536	T	G	T	Hoxd9_MA0913.1	10	0	+	0	0	.
chr8	121191485	121191486	chr8:121191486:G:A	rs7463285	G	A	G	Hoxd9_MA0913.1	21	0	+	0	0	.
chr8	121207815	121207816	chr8:121207816:C:T	rs10103861	C	T	C	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr8	121227572	121227573	chr8:121227573:G:C	rs10110157	G	C	C	Hoxd9_MA0913.1	26	0	-	0	0	.
chr8	121227580	121227581	chr8:121227581:G:T	rs1504650	G	T	T	Hoxd9_MA0913.1	18	0	-	0	0	.
chr8	121227603	121227604	chr8:121227604:A:G	rs1504651	A	G	G	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr8	121285200	121285201	chr8:121285201:G:A	rs16895033	G	A	A	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr8	121323891	121323892	chr8:121323892:G:A	rs10956026	G	A	A	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr8	121450334	121450335	chr8:121450335:G:A	rs73332345	G	A	G	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr8	121454737	121454738	chr8:121454738:G:C	rs138967427	G	C	G	Hoxd9_MA0913.1	26	0	-	0	0	.
chr8	121636089	121636090	chr8:121636090:G:A	rs62524938	G	A	G	Hoxd9_MA0913.1	23	0	+	0	0	.
chr8	121773435	121773436	chr8:121773436:G:A	rs279619	G	A	G	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr8	121830898	121830899	chr8:121830899:A:G	rs74726895	A	G	A	Hoxd9_MA0913.1	15	0	-	0	0	.
chr8	121830917	121830918	chr8:121830918:C:T	rs375170827	C	T	C	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr8	121897096	121897097	chr8:121897097:G:A	rs12680599	G	A	G	Hoxd9_MA0913.1	0	1	+	8.281840948251881	7.334107224841421	GCAATTAATA
chr8	122168627	122168628	chr8:122168628:C:G	rs10095032	C	G	c	Hoxd9_MA0913.1	20	0	+	0	0	.
chr8	122168628	122168629	chr8:122168629:C:T	rs6470064	C	T	t	Hoxd9_MA0913.1	21	0	+	0	0	.
chr8	122281053	122281054	chr8:122281054:G:T	rs4518676	G	T	T	Hoxd9_MA0913.1	18	0	-	0	0	.
chr8	122572558	122572559	chr8:122572559:C:T	rs540644791	C	T	C	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr8	122592740	122592741	chr8:122592741:A:G	rs77732209	A	G	A	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr8	122758766	122758767	chr8:122758767:C:T	rs16897381	C	T	C	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr8	122758799	122758800	chr8:122758800:G:A	rs117120259	G	A	G	Hoxd9_MA0913.1	21	0	+	0	0	.
chr8	122828705	122828706	chr8:122828706:G:A	rs12675789	G	A	G	Hoxd9_MA0913.1	1	1	-	7.83890107168488	7.490765443955856	GCGATTAAAT
chr8	123072365	123072366	chr8:123072366:G:C	rs4871343	G	C	C	Hoxd9_MA0913.1	9	1	-	8.719303557138431	8.334848631621252	GCAATAAAAC
chr8	123086382	123086383	chr8:123086383:C:G	rs2385162	C	G	C	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr8	123286204	123286205	chr8:123286205:G:C	rs13250217	G	C	C	Hoxd9_MA0913.1	9	1	-	7.7976343601680895	7.4131794346509094	GCCATAAAAC
chr8	123514522	123514523	chr8:123514523:T:C	rs2294089	T	C	C	Hoxd9_MA0913.1	19	0	-	0	0	.
chr8	123534938	123534939	chr8:123534939:C:T	rs114022014	C	T	C	Hoxd9_MA0913.1	1	1	+	8.60979621184233	8.261660584113304	ACAATAAAAT
chr8	123595469	123595470	chr8:123595470:A:G	rs28445658	A	G	A	Hoxd9_MA0913.1	11	0	-	0	0	.
chr8	123597925	123597926	chr8:123597926:G:A	rs58847541	G	A	G	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr8	123658895	123658896	chr8:123658896:C:A	rs12550643	C	A	A	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr8	123739343	123739344	chr8:123739344:T:G	rs6470180	T	G	T	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr8	124115164	124115165	chr8:124115165:T:C	rs73332237	T	C	C	Hoxd9_MA0913.1	7	1	-	8.853608248980283	2.01446377162594	ACAATAAAAA
chr8	124182150	124182151	chr8:124182151:G:A	rs117772879	G	A	g	Hoxd9_MA0913.1	22	0	+	0	0	.
chr8	124559265	124559266	chr8:124559266:T:C	rs3793399	T	C	C	Hoxd9_MA0913.1	16	0	-	0	0	.
chr8	124566689	124566690	chr8:124566690:G:A	rs79503489	G	A	G	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr8	124593155	124593156	chr8:124593156:C:G	rs546119730	C	G	C	Hoxd9_MA0913.1	26	0	-	0	0	.
chr8	124593164	124593165	chr8:124593165:T:C	rs565258559	T	C	T	Hoxd9_MA0913.1	17	0	-	0	0	.
chr8	124594592	124594593	chr8:124594593:T:C	rs76127885	T	C	T	Hoxd9_MA0913.1	4	1	+	8.853608248980283	5.561473997205303	ACAATAAAAA
chr8	124635806	124635807	chr8:124635807:G:A	rs565657274	G	A	G	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr8	124718552	124718553	chr8:124718553:C:T	rs117045236	C	T	C	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr8	124872591	124872592	chr8:124872592:A:G	rs6470298	A	G	G	Hoxd9_MA0913.1	26	0	-	0	0	.
chr8	124941881	124941882	chr8:124941882:T:G	rs10956225	T	G	T	Hoxd9_MA0913.1	3	1	-	7.4131794346509094	2.9469487642508536	GCCATAAAAG
chr8	125091030	125091031	chr8:125091031:C:A	rs142254336	C	A	C	Hoxd9_MA0913.1	24	0	-	0	0	.
chr8	125175771	125175772	chr8:125175772:A:G	rs28469260	A	G	A	Hoxd9_MA0913.1	15	0	+	0	0	.
chr8	125207625	125207626	chr8:125207626:C:T	rs73704554	C	T	C	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr8	125207633	125207634	chr8:125207634:C:T	rs56135036	C	T	C	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr8	125209731	125209732	chr8:125209732:A:G	rs73351205	A	G	A	Hoxd9_MA0913.1	10	0	-	0	0	.
chr8	125212274	125212275	chr8:125212275:G:A	rs4871574	G	A	A	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr8	125213322	125213323	chr8:125213323:C:G	rs568582435	C	G	C	Hoxd9_MA0913.1	0	1	-	8.281840948251881	6.803842279868624	GCAATTAATA
chr8	125220602	125220603	chr8:125220603:G:T	rs57062304	G	T	G	Hoxd9_MA0913.1	10	0	+	0	0	.
chr8	125271745	125271746	chr8:125271746:T:A	rs376465845	T	A	T	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr8	125271767	125271768	chr8:125271768:G:C	rs11779422	G	C	G	Hoxd9_MA0913.1	12	0	-	0	0	.
chr8	125298631	125298632	chr8:125298632:C:T	rs72720586	C	T	C	Hoxd9_MA0913.1	17	0	+	0	0	.
chr8	125314214	125314215	chr8:125314215:A:G	rs142891049	A	G	A	Hoxd9_MA0913.1	27	0	+	0	0	.
chr8	125345411	125345412	chr8:125345412:T:C	rs6981550	T	C	C	Hoxd9_MA0913.1	7	1	-	8.853608248980283	2.01446377162594	ACAATAAAAA
chr8	125419742	125419743	chr8:125419743:T:C	rs4559257	T	C	c	Hoxd9_MA0913.1	16	0	-	0	0	.
chr8	125657476	125657477	chr8:125657477:A:G	rs1551405	A	G	A	Hoxd9_MA0913.1	13	0	-	0	0	.
chr8	126099059	126099060	chr8:126099060:G:A	rs72712723	G	A	G	Hoxd9_MA0913.1	28	0	-	0	0	.
chr8	126410706	126410707	chr8:126410707:A:G	rs56412117	A	G	G	Hoxd9_MA0913.1	26	0	-	0	0	.
chr8	126771668	126771669	chr8:126771669:G:A	rs58283119	G	A	A	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr8	126824864	126824865	chr8:126824865:C:T	rs10103938	C	T	C	Hoxd9_MA0913.1	24	0	+	0	0	.
chr8	126824865	126824866	chr8:126824866:G:T	rs1873186	G	T	T	Hoxd9_MA0913.1	25	0	+	0	0	.
chr8	126840541	126840542	chr8:126840542:G:C	rs117559483	G	C	G	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr8	127398100	127398101	chr8:127398101:C:T	rs3843548	C	T	T	Hoxd9_MA0913.1	16	0	+	0	0	.
chr8	127560632	127560633	chr8:127560633:A:G	rs6470533	A	G	G	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr8	127560664	127560665	chr8:127560665:C:A	rs10097522	C	A	C	Hoxd9_MA0913.1	25	0	+	0	0	.
chr8	127586313	127586314	chr8:127586314:T:C	rs74534346	T	C	T	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr8	127612733	127612734	chr8:127612734:G:C	rs7843970	G	C	G	Hoxd9_MA0913.1	10	0	+	0	0	.
chr8	127679182	127679183	chr8:127679183:A:G	rs12548317	A	G	A	Hoxd9_MA0913.1	16	0	+	0	0	.
chr8	127707638	127707639	chr8:127707639:A:T	rs10094872	A	T	A	Hoxd9_MA0913.1	4	1	-	8.812437826870472	6.1251864026843155	ACAATTAAAA
chr8	127739316	127739317	chr8:127739317:C:T	rs4645963	C	T	C	Hoxd9_MA0913.1	17	0	-	0	0	.
chr8	127739317	127739318	chr8:127739318:G:A	rs536910236	G	A	G	Hoxd9_MA0913.1	16	0	-	0	0	.
chr8	127763564	127763565	chr8:127763565:G:A	rs56284488	G	A	G	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr8	127908108	127908109	chr8:127908109:T:G	chr8:127908109:T:G	T	G	T	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr8	127990982	127990983	chr8:127990983:C:A	rs2076899	C	A	C	Hoxd9_MA0913.1	12	0	+	0	0	.
chr8	128035078	128035079	chr8:128035079:G:A	rs2173537	G	A	G	Hoxd9_MA0913.1	17	0	+	0	0	.
chr8	128035083	128035084	chr8:128035084:G:A	rs188467158	G	A	G	Hoxd9_MA0913.1	22	0	+	0	0	.
chr8	128194239	128194240	chr8:128194240:A:C	rs7007953	A	C	A	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr8	128201719	128201720	chr8:128201720:T:A	rs73707445	T	A	T	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr8	128230554	128230555	chr8:128230555:T:C	rs10505507	T	C	T	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr8	128378467	128378468	chr8:128378468:A:G	rs77527984	A	G	A	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr8	128524968	128524969	chr8:128524969:T:C	rs118080959	T	C	T	Hoxd9_MA0913.1	25	0	+	0	0	.
chr8	128774218	128774219	chr8:128774219:A:G	rs4140707	A	G	G	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr8	129364304	129364305	chr8:129364305:C:T	rs16904047	C	T	C	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr8	129816653	129816654	chr8:129816654:C:T	rs2624802	C	T	T	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr8	130134597	130134598	chr8:130134598:C:T	rs34014736	C	T	C	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr8	130182754	130182755	chr8:130182755:A:G	rs77288605	A	G	A	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr8	130527844	130527845	chr8:130527845:G:A	rs73414514	G	A	G	Hoxd9_MA0913.1	10	0	+	0	0	.
chr8	130549869	130549870	chr8:130549870:A:T	rs4276705	A	T	T	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr8	130642018	130642019	chr8:130642019:T:G	rs4584156	T	G	T	Hoxd9_MA0913.1	6	1	-	8.246554688443613	3.771977825775408	GTCATTAAAT
chr8	130769763	130769764	chr8:130769764:G:A	rs13259734	G	A	G	Hoxd9_MA0913.1	13	0	+	0	0	.
chr8	130888873	130888874	chr8:130888874:T:C	rs7819655	T	C	T	Hoxd9_MA0913.1	9	1	+	8.287725110553424	7.449498732439066	GTCATAAAAT
chr8	130946012	130946013	chr8:130946013:A:C	rs16929	A	C	A	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr8	131190641	131190642	chr8:131190642:G:A	rs11991267	G	A	G	Hoxd9_MA0913.1	24	0	+	0	0	.
chr8	131398895	131398896	chr8:131398896:G:A	rs10086113	G	A	A	Hoxd9_MA0913.1	12	0	+	0	0	.
chr8	131862628	131862629	chr8:131862629:G:A	rs78589285	G	A	G	Hoxd9_MA0913.1	22	0	+	0	0	.
chr8	131862632	131862633	chr8:131862633:G:A	rs2970615	G	A	G	Hoxd9_MA0913.1	26	0	+	0	0	.
chr8	132122387	132122388	chr8:132122388:G:C	rs2436129	G	C	C	Hoxd9_MA0913.1	16	0	-	0	0	.
chr8	132552155	132552156	chr8:132552156:C:A	rs10956672	C	A	A	Hoxd9_MA0913.1	11	0	-	0	0	.
chr8	132831221	132831222	chr8:132831222:T:A	rs6989647	T	A	A	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr8	132918428	132918429	chr8:132918429:C:T	rs853307	C	T	C	Hoxd9_MA0913.1	20	0	-	0	0	.
chr8	133069202	133069203	chr8:133069203:C:T	rs4736622	C	T	C	Hoxd9_MA0913.1	16	0	-	0	0	.
chr8	133070904	133070905	chr8:133070905:C:T	rs7002393	C	T	C	Hoxd9_MA0913.1	28	0	+	0	0	.
chr8	133072394	133072395	chr8:133072395:A:G	rs4736623	A	G	A	Hoxd9_MA0913.1	26	0	-	0	0	.
chr8	133073020	133073021	chr8:133073021:C:T	rs2244718	C	T	T	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr8	133381857	133381858	chr8:133381858:A:G	rs116290628	A	G	A	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr8	133450047	133450048	chr8:133450048:A:G	rs7004093	A	G	G	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr8	133470141	133470142	chr8:133470142:A:G	rs3779922	A	G	.	Hoxd9_MA0913.1	26	0	+	0	0	.
chr8	133842321	133842322	chr8:133842322:G:T	rs10090807	G	T	T	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr8	133982835	133982836	chr8:133982836:A:C	rs76138197	A	C	A	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr8	134025460	134025461	chr8:134025461:G:A	rs17747814	G	A	G	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr8	134233086	134233087	chr8:134233087:G:C	rs73711417	G	C	G	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr8	134233118	134233119	chr8:134233119:G:A	rs138502935	G	A	G	Hoxd9_MA0913.1	16	0	+	0	0	.
chr8	134450339	134450340	chr8:134450340:T:C	rs4075461	T	C	C	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr8	134450373	134450374	chr8:134450374:T:C	rs4075462	T	C	C	Hoxd9_MA0913.1	23	0	+	0	0	.
chr8	134694147	134694148	chr8:134694148:C:G	rs7463826	C	G	C	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr8	134740403	134740404	chr8:134740404:C:T	rs13272671	C	T	c	Hoxd9_MA0913.1	28	0	-	0	0	.
chr8	135430653	135430654	chr8:135430654:T:C	rs11985890	T	C	C	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr8	135655266	135655267	chr8:135655267:C:T	rs72734032	C	T	C	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr8	135703583	135703584	chr8:135703584:G:A	rs7820043	G	A	A	Hoxd9_MA0913.1	17	0	-	0	0	.
chr8	135721116	135721117	chr8:135721117:A:T	rs7827685	A	T	T	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr8	135811004	135811005	chr8:135811005:C:T	rs72737826	C	T	C	Hoxd9_MA0913.1	1	1	+	8.281840948251881	7.933705320522856	GCAATTAATA
chr8	136516879	136516880	chr8:136516880:A:G	rs4909345	A	G	A	Hoxd9_MA0913.1	25	0	-	0	0	.
chr8	136530139	136530140	chr8:136530140:C:T	rs114965468	C	T	C	Hoxd9_MA0913.1	16	0	+	0	0	.
chr8	137191478	137191479	chr8:137191479:A:G	rs35284528	A	G	A	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr8	137565597	137565598	chr8:137565598:A:G	rs7828370	A	G	G	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr8	137761772	137761773	chr8:137761773:T:G	rs9324456	T	G	T	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr8	137984843	137984844	chr8:137984844:T:A	rs16908100	T	A	A	Hoxd9_MA0913.1	18	0	-	0	0	.
chr8	138099914	138099915	chr8:138099915:C:T	rs11998620	C	T	T	Hoxd9_MA0913.1	0	1	-	9.51635951314298	8.568625789732518	GCAATTAAAT
chr8	138180369	138180370	chr8:138180370:G:A	rs4461947	G	A	G	Hoxd9_MA0913.1	15	0	+	0	0	.
chr8	138578658	138578659	chr8:138578659:G:T	rs61240672	G	T	T	Hoxd9_MA0913.1	13	0	+	0	0	.
chr8	139223722	139223723	chr8:139223723:C:T	rs954621612	C	T	C	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr8	139242491	139242492	chr8:139242492:G:A	rs35432409	G	A	A	Hoxd9_MA0913.1	24	0	+	0	0	.
chr8	139594064	139594065	chr8:139594065:A:G	rs4736083	A	G	A	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr8	139594086	139594087	chr8:139594087:A:G	rs2615372	A	G	G	Hoxd9_MA0913.1	8	1	+	8.678133135028622	7.105164557570679	GCAATTAAAC
chr8	139950319	139950320	chr8:139950320:G:A	rs1542502	G	A	A	Hoxd9_MA0913.1	1	1	-	8.123883530932645	7.775747903203619	GCGATAAAAA
chr8	140594872	140594873	chr8:140594873:C:T	rs145692360	C	T	C	Hoxd9_MA0913.1	21	0	-	0	0	.
chr8	140648921	140648922	chr8:140648922:T:A	rs28796951	T	A	T	Hoxd9_MA0913.1	27	0	+	0	0	.
chr8	141053134	141053135	chr8:141053135:C:T	rs7824649	C	T	C	Hoxd9_MA0913.1	1	1	+	8.635860738282448	8.287725110553424	GCCATAAAAT
chr8	141131385	141131386	chr8:141131386:G:A	rs143461772	G	A	G	Hoxd9_MA0913.1	22	0	-	0	0	.
chr8	141237921	141237922	chr8:141237922:C:T	rs7014142	C	T	C	Hoxd9_MA0913.1	19	0	-	0	0	.
chr8	141264532	141264533	chr8:141264533:T:G	rs1865246	T	G	T	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr8	141431488	141431489	chr8:141431489:G:A	rs148325578	G	A	G	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr8	141442902	141442903	chr8:141442903:A:G	rs6578184	A	G	G	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr8	141889413	141889414	chr8:141889414:A:G	rs578223979	A	G	A	Hoxd9_MA0913.1	28	0	+	0	0	.
chr8	142157121	142157122	chr8:142157122:C:T	rs7843340	C	T	T	Hoxd9_MA0913.1	10	0	-	0	0	.
chr8	142259659	142259660	chr8:142259660:G:A	rs76751760	G	A	g	Hoxd9_MA0913.1	28	0	+	0	0	.
chr8	142658011	142658012	chr8:142658012:C:G	rs77532358	C	G	C	Hoxd9_MA0913.1	11	0	-	0	0	.
chr8	142919585	142919586	chr8:142919586:A:G	rs10956996	A	G	G	Hoxd9_MA0913.1	4	1	-	8.853608248980283	5.561473997205303	ACAATAAAAA
chr8	143032604	143032605	chr8:143032605:C:T	rs11984715	C	T	C	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr8	143055985	143055986	chr8:143055986:A:G	rs10103088	A	G	G	Hoxd9_MA0913.1	17	0	-	0	0	.
chr8	143484959	143484960	chr8:143484960:C:T	rs150961623	C	T	C	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr8	143484966	143484967	chr8:143484967:A:C	rs73715627	A	C	C	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr8	143842680	143842681	chr8:143842681:C:T	rs116852718	C	T	.	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr8	144094400	144094401	chr8:144094401:C:A	rs11780874	C	A	C	Hoxd9_MA0913.1	1	1	+	8.853608248980283	6.433789872955025	ACAATAAAAA
chr8	144094425	144094426	chr8:144094426:G:A	rs35514433	G	A	G	Hoxd9_MA0913.1	26	0	+	0	0	.
chr8	144536467	144536468	chr8:144536468:G:C	rs144273207	G	C	G	Hoxd9_MA0913.1	13	0	-	0	0	.
chr8	144646296	144646297	chr8:144646297:C:A	rs148348179	C	A	C	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr8	144778725	144778726	chr8:144778726:T:C	rs7004501	T	C	T	Hoxd9_MA0913.1	24	0	-	0	0	.
chr8	144834136	144834137	chr8:144834137:C:T	rs113674134	C	T	C	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr9	98559	98560	chr9:98560:T:C	rs4742438	T	C	.	Hoxd9_MA0913.1	27	0	-	0	0	.
chr9	139528	139529	chr9:139529:C:T	rs9406455	C	T	.	Hoxd9_MA0913.1	1	1	+	8.853608248980283	8.505472621251258	ACAATAAAAA
chr9	178430	178431	chr9:178431:C:T	rs2992847	C	T	.	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr9	206511	206512	chr9:206512:A:C	rs7022984	A	C	C	Hoxd9_MA0913.1	20	0	+	0	0	.
chr9	289347	289348	chr9:289348:C:G	rs7049010	C	G	C	Hoxd9_MA0913.1	0	1	-	7.801678332738202	6.323679664354945	GCAATAAACA
chr9	325298	325299	chr9:325299:T:C	rs10813612	T	C	T	Hoxd9_MA0913.1	18	0	+	0	0	.
chr9	590065	590066	chr9:590066:A:G	rs76274150	A	G	A	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr9	594261	594262	chr9:594262:A:C	rs2641998	A	C	A	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr9	629467	629468	chr9:629468:C:T	rs10115825	C	T	T	Hoxd9_MA0913.1	13	0	+	0	0	.
chr9	656735	656736	chr9:656736:A:G	rs912170	A	G	A	Hoxd9_MA0913.1	5	1	+	8.853608248980283	2.631945096084414	ACAATAAAAA
chr9	656877	656878	chr9:656878:C:T	rs912172	C	T	C	Hoxd9_MA0913.1	15	0	-	0	0	.
chr9	656887	656888	chr9:656888:T:A	rs4740843	T	A	T	Hoxd9_MA0913.1	5	1	-	8.853608248980283	8.812437826870472	ACAATAAAAA
chr9	660314	660315	chr9:660315:C:G	rs10815438	C	G	C	Hoxd9_MA0913.1	15	0	-	0	0	.
chr9	660326	660327	chr9:660327:C:G	rs10739106	C	G	G	Hoxd9_MA0913.1	3	1	-	7.932552609785828	5.293940879880877	GCAGTTAAAA
chr9	738603	738604	chr9:738604:G:A	rs142417645	G	A	G	Hoxd9_MA0913.1	19	0	-	0	0	.
chr9	738636	738637	chr9:738637:A:G	rs59681432	A	G	A	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr9	965005	965006	chr9:965006:A:T	rs279899	A	T	a	Hoxd9_MA0913.1	21	0	-	0	0	.
chr9	1048401	1048402	chr9:1048402:G:A	rs2279985	G	A	G	Hoxd9_MA0913.1	18	0	+	0	0	.
chr9	1270675	1270676	chr9:1270676:T:C	rs882092	T	C	T	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr9	1366389	1366390	chr9:1366390:G:A	rs62531726	G	A	G	Hoxd9_MA0913.1	29	0	-	0	0	.
chr9	1369472	1369473	chr9:1369473:T:G	rs1331989	T	G	T	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr9	1535066	1535067	chr9:1535067:C:A	rs1796889	C	A	C	Hoxd9_MA0913.1	20	0	-	0	0	.
chr9	1601711	1601712	chr9:1601712:G:A	rs10962222	G	A	G	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr9	1604961	1604962	chr9:1604962:C:T	rs702163	C	T	T	Hoxd9_MA0913.1	23	0	+	0	0	.
chr9	1757153	1757154	chr9:1757154:T:A	rs4373567	T	A	T	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr9	1994143	1994144	chr9:1994144:G:A	rs10964314	G	A	G	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr9	2018147	2018148	chr9:2018148:A:G	rs150956964	A	G	A	Hoxd9_MA0913.1	28	0	+	0	0	.
chr9	2059594	2059595	chr9:2059595:T:C	rs113913728	T	C	T	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr9	2180509	2180510	chr9:2180510:A:G	rs10965112	A	G	A	Hoxd9_MA0913.1	23	0	-	0	0	.
chr9	2180535	2180536	chr9:2180536:T:C	rs10757235	T	C	C	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr9	2234595	2234596	chr9:2234596:G:C	chr9:2234596:G:C	G	C	G	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr9	2257980	2257981	chr9:2257981:C:G	rs13294943	C	G	G	Hoxd9_MA0913.1	27	0	-	0	0	.
chr9	2263706	2263707	chr9:2263707:G:A	rs10811727	G	A	G	Hoxd9_MA0913.1	20	0	-	0	0	.
chr9	2282950	2282951	chr9:2282951:G:A	rs1324208	G	A	G	Hoxd9_MA0913.1	8	1	+	7.984561357794846	9.55752993525279	GCAATAAAGT
chr9	2330284	2330285	chr9:2330285:C:T	rs10122446	C	T	T	Hoxd9_MA0913.1	27	0	-	0	0	.
chr9	2338935	2338936	chr9:2338936:C:A	rs7018661	C	A	C	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr9	2385824	2385825	chr9:2385825:G:A	rs138545083	G	A	G	Hoxd9_MA0913.1	1	1	-	9.55752993525279	9.209394307523764	GCAATAAAAT
chr9	2394784	2394785	chr9:2394785:C:G	rs959381	C	G	G	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr9	2536318	2536319	chr9:2536319:T:A	rs669341	T	A	T	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr9	3060290	3060291	chr9:3060291:A:C	rs10738843	A	C	A	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr9	3180880	3180881	chr9:3180881:G:C	rs13296262	G	C	G	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr9	3285880	3285881	chr9:3285881:G:T	rs995539692	G	T	G	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr9	3746245	3746246	chr9:3746246:A:G	rs4147121	A	G	A	Hoxd9_MA0913.1	9	1	+	8.879672775420401	7.4131794346509094	GCCATAAAAA
chr9	3746412	3746413	chr9:3746413:C:A	rs4147122	C	A	A	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr9	3971766	3971767	chr9:3971767:T:C	rs7035055	T	C	T	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr9	3971786	3971787	chr9:3971787:C:T	rs10758547	C	T	C	Hoxd9_MA0913.1	11	0	+	0	0	.
chr9	4028841	4028842	chr9:4028842:C:T	rs17703489	C	T	C	Hoxd9_MA0913.1	29	0	+	0	0	.
chr9	4039567	4039568	chr9:4039568:A:G	rs10974297	A	G	A	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr9	4115459	4115460	chr9:4115460:G:C	rs806055	G	C	C	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr9	4334350	4334351	chr9:4334351:G:C	rs77185470	G	C	G	Hoxd9_MA0913.1	17	0	+	0	0	.
chr9	4340408	4340409	chr9:4340409:C:A	rs10758608	C	A	C	Hoxd9_MA0913.1	12	0	+	0	0	.
chr9	4530687	4530688	chr9:4530688:G:A	rs74810367	G	A	G	Hoxd9_MA0913.1	17	0	-	0	0	.
chr9	4560347	4560348	chr9:4560348:C:T	rs9886720	C	T	t	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr9	4686222	4686223	chr9:4686223:T:A	rs10974730	T	A	T	Hoxd9_MA0913.1	6	1	-	9.760171550280933	7.336851602746947	GCAATTAAAA
chr9	4767719	4767720	chr9:4767720:T:C	rs437951	T	C	T	Hoxd9_MA0913.1	27	0	-	0	0	.
chr9	5043766	5043767	chr9:5043767:A:T	rs58345215	A	T	A	Hoxd9_MA0913.1	5	1	+	8.334848631621252	8.293678209511443	GCAATAAAAG
chr9	5259721	5259722	chr9:5259722:C:T	rs7848416	C	T	T	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr9	5336983	5336984	chr9:5336984:C:G	rs1885498	C	G	G	Hoxd9_MA0913.1	1	1	+	9.801341972390743	6.7087769601060305	GCAATAAAAA
chr9	5440349	5440350	chr9:5440350:A:C	rs113560969	A	C	A	Hoxd9_MA0913.1	2	1	+	7.973723031895638	7.052053834925298	GCAGTAAAAA
chr9	5466084	5466085	chr9:5466085:A:G	rs59906468	A	G	A	Hoxd9_MA0913.1	7	1	+	8.812437826870472	1.9732933495161296	ACAATTAAAA
chr9	5531860	5531861	chr9:5531861:A:T	rs7875503	A	T	A	Hoxd9_MA0913.1	29	0	+	0	0	.
chr9	5627145	5627146	chr9:5627146:T:C	chr9:5627146:T:C	T	C	T	Hoxd9_MA0913.1	21	0	+	0	0	.
chr9	5704519	5704520	chr9:5704520:C:T	rs11787709	C	T	C	Hoxd9_MA0913.1	11	0	-	0	0	.
chr9	6022018	6022019	chr9:6022019:C:G	rs2618781	C	G	G	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr9	6086072	6086073	chr9:6086073:C:T	rs7024677	C	T	C	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr9	6134047	6134048	chr9:6134048:G:C	rs2026992	G	C	G	Hoxd9_MA0913.1	22	0	-	0	0	.
chr9	6236500	6236501	chr9:6236501:T:G	rs4237164	T	G	T	Hoxd9_MA0913.1	4	1	+	7.801678332738202	4.509544080963223	GCAATAAACA
chr9	6539066	6539067	chr9:6539067:A:G	rs4742212	A	G	A	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr9	6539086	6539087	chr9:6539087:G:T	rs4742213	G	T	T	Hoxd9_MA0913.1	16	0	+	0	0	.
chr9	6680593	6680594	chr9:6680594:C:T	rs59768269	C	T	C	Hoxd9_MA0913.1	27	0	+	0	0	.
chr9	6882168	6882169	chr9:6882169:A:G	rs2381512	A	G	G	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr9	6929893	6929894	chr9:6929894:A:C	rs11788849	A	C	C	Hoxd9_MA0913.1	16	0	-	0	0	.
chr9	6947955	6947956	chr9:6947956:G:A	rs11794838	G	A	G	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr9	7267175	7267176	chr9:7267176:T:C	rs4740874	T	C	T	Hoxd9_MA0913.1	5	1	+	9.168223885413955	5.774592536154395	GTAATTAAAT
chr9	7275201	7275202	chr9:7275202:C:G	rs1928206	C	G	C	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr9	7320079	7320080	chr9:7320080:C:G	rs539460530	C	G	c	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr9	7469107	7469108	chr9:7469108:T:C	rs116005355	T	C	T	Hoxd9_MA0913.1	3	1	-	8.60979621184233	6.782177271347225	ACAATAAAAT
chr9	7596926	7596927	chr9:7596927:C:T	rs10118443	C	T	C	Hoxd9_MA0913.1	14	0	+	0	0	.
chr9	7607424	7607425	chr9:7607425:C:T	rs10815647	C	T	T	Hoxd9_MA0913.1	1	1	+	8.123883530932645	7.775747903203619	GCGATAAAAA
chr9	7694894	7694895	chr9:7694895:T:C	rs1332908	T	C	T	Hoxd9_MA0913.1	2	1	-	7.801678332738202	6.124219891280104	GCAATAAACA
chr9	7789827	7789828	chr9:7789828:C:T	rs55971327	C	T	C	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr9	7894280	7894281	chr9:7894281:T:A	rs4742422	T	A	A	Hoxd9_MA0913.1	24	0	+	0	0	.
chr9	8074896	8074897	chr9:8074897:G:A	rs10815746	G	A	G	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr9	8381697	8381698	chr9:8381698:G:A	rs10815842	G	A	A	Hoxd9_MA0913.1	0	1	+	8.287725110553424	7.3399913871429625	GTCATAAAAT
chr9	8417500	8417501	chr9:8417501:A:C	rs12377175	A	C	A	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr9	8417510	8417511	chr9:8417511:G:T	rs78141476	G	T	G	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr9	8425121	8425122	chr9:8425122:T:C	rs2381796	T	C	T	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr9	8716104	8716105	chr9:8716105:C:T	rs1991931	C	T	C	Hoxd9_MA0913.1	0	1	-	9.51635951314298	8.568625789732518	GCAATTAAAT
chr9	8825374	8825375	chr9:8825375:G:A	rs10121702	G	A	G	Hoxd9_MA0913.1	8	1	-	7.801678332738202	8.32301137036169	GCAATAAACA
chr9	8871281	8871282	chr9:8871282:A:C	rs191020163	A	C	A	Hoxd9_MA0913.1	4	1	-	7.943390935685037	4.651256683910057	GCAATTAAGT
chr9	8923380	8923381	chr9:8923381:C:T	rs16928627	C	T	C	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr9	9425189	9425190	chr9:9425190:T:C	rs4742599	T	C	C	Hoxd9_MA0913.1	8	1	-	8.60979621184233	7.0368276343843865	ACAATAAAAT
chr9	9425197	9425198	chr9:9425198:T:A	rs4742600	T	A	A	Hoxd9_MA0913.1	0	1	-	8.60979621184233	6.52038723929992	ACAATAAAAT
chr9	9469574	9469575	chr9:9469575:C:G	rs16929549	C	G	C	Hoxd9_MA0913.1	25	0	+	0	0	.
chr9	9897100	9897101	chr9:9897101:T:C	rs10116104	T	C	T	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr9	9961800	9961801	chr9:9961801:G:C	rs140052661	G	C	G	Hoxd9_MA0913.1	13	0	+	0	0	.
chr9	10062971	10062972	chr9:10062972:T:A	rs396845	T	A	T	Hoxd9_MA0913.1	6	1	-	9.55752993525279	7.134209987718804	GCAATAAAAT
chr9	10192289	10192290	chr9:10192290:A:C	rs294856	A	C	A	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr9	10232764	10232765	chr9:10232765:C:G	rs13288348	C	G	C	Hoxd9_MA0913.1	25	0	-	0	0	.
chr9	10274057	10274058	chr9:10274058:G:T	rs10809055	G	T	G	Hoxd9_MA0913.1	1	1	-	8.594690316172638	6.174871940147379	GCCATTAAAT
chr9	11158313	11158314	chr9:11158314:T:C	rs1931423	T	C	c	Hoxd9_MA0913.1	19	0	-	0	0	.
chr9	11158344	11158345	chr9:11158345:T:C	rs1931424	T	C	c	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr9	11457461	11457462	chr9:11457462:G:C	rs7023879	G	C	C	Hoxd9_MA0913.1	22	0	+	0	0	.
chr9	11841787	11841788	chr9:11841788:A:G	rs10960309	A	G	-	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr9	11895784	11895785	chr9:11895785:T:A	rs62549603	T	A	t	Hoxd9_MA0913.1	22	0	-	0	0	.
chr9	12359583	12359584	chr9:12359584:G:C	rs4628343	G	C	C	Hoxd9_MA0913.1	14	0	-	0	0	.
chr9	12775691	12775692	chr9:12775692:T:A	chr9:12775692:T:A	T	A	T	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr9	12775698	12775699	chr9:12775699:G:A	rs115669648	G	A	G	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr9	12813037	12813038	chr9:12813038:C:A	rs4111024	C	A	T	Hoxd9_MA0913.1	0	1	-	9.412035922551908	6.374893226599038	GTAATTAAAA
chr9	12846077	12846078	chr9:12846078:T:A	rs635655	T	A	A	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr9	12882328	12882329	chr9:12882329:C:A	rs532181	C	A	C	Hoxd9_MA0913.1	23	0	-	0	0	.
chr9	13159354	13159355	chr9:13159355:C:T	rs6474755	C	T	T	Hoxd9_MA0913.1	20	0	+	0	0	.
chr9	13188785	13188786	chr9:13188786:G:T	rs111794040	G	T	G	Hoxd9_MA0913.1	24	0	+	0	0	.
chr9	13513692	13513693	chr9:13513693:T:A	chr9:13513693:T:A	T	A	T	Hoxd9_MA0913.1	8	1	-	8.879672775420401	7.401342173391351	GCCATAAAAA
chr9	13809735	13809736	chr9:13809736:A:G	rs894822	A	G	G	Hoxd9_MA0913.1	18	0	-	0	0	.
chr9	13811492	13811493	chr9:13811493:A:G	rs573781537	A	G	A	Hoxd9_MA0913.1	25	0	-	0	0	.
chr9	13873487	13873488	chr9:13873488:G:T	rs2382423	G	T	G	Hoxd9_MA0913.1	21	0	+	0	0	.
chr9	13899200	13899201	chr9:13899201:C:G	rs7874645	C	G	G	Hoxd9_MA0913.1	18	0	-	0	0	.
chr9	13899209	13899210	chr9:13899210:C:T	rs7874646	C	T	T	Hoxd9_MA0913.1	9	1	-	7.4131794346509094	8.879672775420401	GCCATAAAAG
chr9	13934704	13934705	chr9:13934705:G:T	rs34764349	G	T	G	Hoxd9_MA0913.1	8	1	+	7.943390935685037	8.038028911113928	GCAATTAAGT
chr9	14029763	14029764	chr9:14029764:A:C	rs35113032	A	C	A	Hoxd9_MA0913.1	6	1	+	7.801678332738202	3.327101470069997	GCAATAAACA
chr9	14055973	14055974	chr9:14055974:T:C	rs12685927	T	C	T	Hoxd9_MA0913.1	17	0	-	0	0	.
chr9	14203368	14203369	chr9:14203369:T:A	rs77225165	T	A	T	Hoxd9_MA0913.1	29	0	+	0	0	.
chr9	14308111	14308112	chr9:14308112:G:C	rs535835601	G	C	G	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr9	14326804	14326805	chr9:14326805:G:A	rs76335205	G	A	G	Hoxd9_MA0913.1	8	1	-	7.801678332738202	8.32301137036169	GCAATAAACA
chr9	14564200	14564201	chr9:14564201:A:C	rs10961579	A	C	A	Hoxd9_MA0913.1	15	0	+	0	0	.
chr9	14957795	14957796	chr9:14957796:T:A	rs11793253	T	A	T	Hoxd9_MA0913.1	4	1	+	7.973723031895638	5.2864716077094815	GCAGTAAAAA
chr9	15229511	15229512	chr9:15229512:G:A	rs475005	G	A	G	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr9	15308725	15308726	chr9:15308726:A:G	chr9:15308726:A:G	A	G	A	Hoxd9_MA0913.1	13	0	-	0	0	.
chr9	15388998	15388999	chr9:15388999:G:C	rs12380487	G	C	G	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr9	15389454	15389455	chr9:15389455:C:T	rs2490854	C	T	T	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr9	15390259	15390260	chr9:15390260:T:A	rs2490859	T	A	A	Hoxd9_MA0913.1	11	0	+	0	0	.
chr9	15390276	15390277	chr9:15390277:T:G	rs13298276	T	G	T	Hoxd9_MA0913.1	28	0	+	0	0	.
chr9	15529853	15529854	chr9:15529854:G:A	rs10810392	G	A	A	Hoxd9_MA0913.1	29	0	-	0	0	.
chr9	16070481	16070482	chr9:16070482:G:A	rs73645252	G	A	G	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr9	16241528	16241529	chr9:16241529:C:T	rs76834636	C	T	C	Hoxd9_MA0913.1	16	0	-	0	0	.
chr9	16243163	16243164	chr9:16243164:T:A	rs1332486	T	A	A	Hoxd9_MA0913.1	13	0	-	0	0	.
chr9	16250371	16250372	chr9:16250372:T:G	rs7857508	T	G	G	Hoxd9_MA0913.1	10	0	+	0	0	.
chr9	16559928	16559929	chr9:16559929:T:C	rs546998579	T	C	T	Hoxd9_MA0913.1	14	0	+	0	0	.
chr9	16572643	16572644	chr9:16572644:C:T	rs1927617	C	T	C	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr9	16705318	16705319	chr9:16705319:G:A	rs952811305	G	A	G	Hoxd9_MA0913.1	24	0	+	0	0	.
chr9	16728533	16728534	chr9:16728534:A:C	rs1411432	A	C	A	Hoxd9_MA0913.1	21	0	-	0	0	.
chr9	16872324	16872325	chr9:16872325:G:A	rs11789875	G	A	G	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr9	16954164	16954165	chr9:16954165:G:A	rs7849300	G	A	g	Hoxd9_MA0913.1	25	0	-	0	0	.
chr9	16987465	16987466	chr9:16987466:G:A	rs13300416	G	A	G	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr9	17323851	17323852	chr9:17323852:C:G	rs17761836	C	G	C	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr9	17508775	17508776	chr9:17508776:C:A	rs2208488	C	A	C	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr9	17578555	17578556	chr9:17578556:G:C	rs3780254	G	C	G	Hoxd9_MA0913.1	17	0	+	0	0	.
chr9	17615154	17615155	chr9:17615155:G:A	rs941790	G	A	G	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr9	17650658	17650659	chr9:17650659:G:C	rs7024337	G	C	C	Hoxd9_MA0913.1	18	0	-	0	0	.
chr9	17750424	17750425	chr9:17750425:C:G	rs114819353	C	G	C	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr9	17871583	17871584	chr9:17871584:C:T	rs12002537	C	T	C	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr9	17888927	17888928	chr9:17888928:A:G	rs10810862	A	G	A	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr9	17894763	17894764	chr9:17894764:T:C	rs16936065	T	C	T	Hoxd9_MA0913.1	18	0	+	0	0	.
chr9	17987409	17987410	chr9:17987410:C:T	rs2891117	C	T	T	Hoxd9_MA0913.1	16	0	-	0	0	.
chr9	18492609	18492610	chr9:18492610:T:C	rs11794163	T	C	T	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr9	18566226	18566227	chr9:18566227:A:C	rs80108761	A	C	A	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr9	18566227	18566228	chr9:18566228:G:T	rs76962160	G	T	G	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr9	18606769	18606770	chr9:18606770:C:A	rs1889008	C	A	C	Hoxd9_MA0913.1	18	0	-	0	0	.
chr9	18606793	18606794	chr9:18606794:C:G	chr9:18606794:C:G	C	G	C	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr9	18633237	18633238	chr9:18633238:T:C	rs58204184	T	C	T	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr9	18798270	18798271	chr9:18798271:C:G	rs4977440	C	G	C	Hoxd9_MA0913.1	26	0	+	0	0	.
chr9	18920238	18920239	chr9:18920239:C:T	rs79847262	C	T	C	Hoxd9_MA0913.1	29	0	-	0	0	.
chr9	18982373	18982374	chr9:18982374:G:A	rs7871205	G	A	G	Hoxd9_MA0913.1	28	0	+	0	0	.
chr9	19119187	19119188	chr9:19119188:G:A	rs10963970	G	A	G	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr9	19178583	19178584	chr9:19178584:T:C	rs10964028	T	C	t	Hoxd9_MA0913.1	6	1	-	8.282172881897674	1.4667522141183342	CCAATTAAAA
chr9	19379325	19379326	chr9:19379326:C:A	rs567486924	C	A	C	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr9	19411859	19411860	chr9:19411860:A:T	rs10811178	A	T	T	Hoxd9_MA0913.1	4	1	-	7.943390935685037	5.25613951149888	GCAATTAAGT
chr9	19416236	19416237	chr9:19416237:A:G	rs55901126	A	G	a	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr9	19922415	19922416	chr9:19922416:T:C	rs143557825	T	C	T	Hoxd9_MA0913.1	27	0	+	0	0	.
chr9	19925967	19925968	chr9:19925968:C:A	rs114279066	C	A	C	Hoxd9_MA0913.1	9	1	-	8.293678209511443	9.51635951314298	GCAATTAAAG
chr9	19982456	19982457	chr9:19982457:T:C	rs12057044	T	C	T	Hoxd9_MA0913.1	16	0	+	0	0	.
chr9	20084211	20084212	chr9:20084212:A:G	rs12342499	A	G	a	Hoxd9_MA0913.1	19	0	-	0	0	.
chr9	20488911	20488912	chr9:20488912:A:G	rs10121168	A	G	A	Hoxd9_MA0913.1	6	1	+	9.209394307523764	2.3939736397444245	GTAATAAAAT
chr9	20562304	20562305	chr9:20562305:G:A	chr9:20562305:G:A	G	A	G	Hoxd9_MA0913.1	25	0	+	0	0	.
chr9	20622778	20622779	chr9:20622779:A:G	rs73434598	A	G	A	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr9	20622783	20622784	chr9:20622784:G:A	chr9:20622784:G:A	G	A	g	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr9	20785364	20785365	chr9:20785365:C:A	rs62557555	C	A	A	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr9	20848483	20848484	chr9:20848484:A:G	rs59533952	A	G	A	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr9	20868107	20868108	chr9:20868108:T:G	rs12003323	T	G	T	Hoxd9_MA0913.1	5	1	+	8.812437826870472	2.631945096084414	ACAATTAAAA
chr9	20898642	20898643	chr9:20898643:T:G	rs10964749	T	G	T	Hoxd9_MA0913.1	5	1	-	7.4131794346509094	3.97837766328154	GCCATAAAAG
chr9	21095633	21095634	chr9:21095634:T:C	rs10964832	T	C	T	Hoxd9_MA0913.1	19	0	+	0	0	.
chr9	21502923	21502924	chr9:21502924:C:T	rs16938435	C	T	C	Hoxd9_MA0913.1	18	0	+	0	0	.
chr9	21549520	21549521	chr9:21549521:G:T	rs140032984	G	T	G	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr9	21587447	21587448	chr9:21587448:C:T	rs1840051	C	T	C	Hoxd9_MA0913.1	15	0	-	0	0	.
chr9	21777596	21777597	chr9:21777597:G:A	rs80119771	G	A	g	Hoxd9_MA0913.1	19	0	+	0	0	.
chr9	21866500	21866501	chr9:21866501:C:T	rs2027484	C	T	T	Hoxd9_MA0913.1	29	0	-	0	0	.
chr9	21965232	21965233	chr9:21965233:C:G	rs2188127	C	G	C	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr9	22039426	22039427	chr9:22039427:C:T	rs12376000	C	T	C	Hoxd9_MA0913.1	26	0	-	0	0	.
chr9	23218768	23218769	chr9:23218769:C:G	rs10965706	C	G	G	Hoxd9_MA0913.1	25	0	-	0	0	.
chr9	23218809	23218810	chr9:23218810:G:A	rs10965707	G	A	G	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr9	23471508	23471509	chr9:23471509:T:C	chr9:23471509:T:C	T	C	T	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr9	23471509	23471510	chr9:23471510:T:G	chr9:23471510:T:G	T	G	T	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr9	23701277	23701278	chr9:23701278:C:T	rs62539994	C	T	C	Hoxd9_MA0913.1	22	0	+	0	0	.
chr9	23719182	23719183	chr9:23719183:C:G	rs7038303	C	G	C	Hoxd9_MA0913.1	17	0	-	0	0	.
chr9	23831032	23831033	chr9:23831033:A:G	rs7869806	A	G	A	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr9	23852267	23852268	chr9:23852268:A:G	rs10811980	A	G	G	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr9	24938959	24938960	chr9:24938960:T:A	rs11792410	T	A	T	Hoxd9_MA0913.1	12	0	+	0	0	.
chr9	25019218	25019219	chr9:25019219:A:G	rs72718140	A	G	A	Hoxd9_MA0913.1	15	0	+	0	0	.
chr9	25241048	25241049	chr9:25241049:C:G	rs10966814	C	G	G	Hoxd9_MA0913.1	1	1	+	8.334848631621252	5.242283619336538	GCAATAAAAG
chr9	25310798	25310799	chr9:25310799:C:A	rs2840039	C	A	C	Hoxd9_MA0913.1	25	0	+	0	0	.
chr9	25567131	25567132	chr9:25567132:G:A	rs2498717	G	A	G	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr9	25591470	25591471	chr9:25591471:T:A	rs10812275	T	A	T	Hoxd9_MA0913.1	19	0	+	0	0	.
chr9	25602722	25602723	chr9:25602723:C:G	rs1986439	C	G	C	Hoxd9_MA0913.1	20	0	+	0	0	.
chr9	25751462	25751463	chr9:25751463:C:T	rs17290832	C	T	G	Hoxd9_MA0913.1	27	0	+	0	0	.
chr9	25805163	25805164	chr9:25805164:G:A	rs7849755	G	A	A	Hoxd9_MA0913.1	25	0	-	0	0	.
chr9	26612596	26612597	chr9:26612597:C:A	rs62542713	C	A	C	Hoxd9_MA0913.1	1	1	+	8.838502353310592	6.418683977285333	GCCATTAAAA
chr9	26684084	26684085	chr9:26684085:T:C	rs10812444	T	C	C	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr9	26788018	26788019	chr9:26788019:G:T	rs17693864	G	T	G	Hoxd9_MA0913.1	22	0	+	0	0	.
chr9	26797402	26797403	chr9:26797403:G:C	rs10511773	G	C	C	Hoxd9_MA0913.1	15	0	+	0	0	.
chr9	27110383	27110384	chr9:27110384:C:T	rs1762074	C	T	T	Hoxd9_MA0913.1	11	0	-	0	0	.
chr9	27212240	27212241	chr9:27212241:G:A	rs10812535	G	A	G	Hoxd9_MA0913.1	13	0	-	0	0	.
chr9	27281152	27281153	chr9:27281153:G:A	rs12343358	G	A	G	Hoxd9_MA0913.1	10	0	+	0	0	.
chr9	27281155	27281156	chr9:27281156:A:C	rs75133775	A	C	A	Hoxd9_MA0913.1	13	0	+	0	0	.
chr9	27659160	27659161	chr9:27659161:C:A	rs7858681	C	A	A	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr9	27857858	27857859	chr9:27857859:C:T	rs10968151	C	T	c	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr9	28200682	28200683	chr9:28200683:A:C	chr9:28200683:A:C	A	C	A	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr9	28327564	28327565	chr9:28327565:C:T	rs6476056	C	T	T	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr9	28892683	28892684	chr9:28892684:C:A	rs78451699	C	A	C	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr9	28912924	28912925	chr9:28912925:T:C	rs3843928	T	C	T	Hoxd9_MA0913.1	19	0	-	0	0	.
chr9	28930955	28930956	chr9:28930956:T:C	rs3910290	T	C	C	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr9	28930988	28930989	chr9:28930989:C:A	rs138634886	C	A	C	Hoxd9_MA0913.1	24	0	+	0	0	.
chr9	29024895	29024896	chr9:29024896:A:G	rs7847631	A	G	G	Hoxd9_MA0913.1	4	1	-	7.984561357794846	4.692427106019867	GCAATAAAGT
chr9	29294453	29294454	chr9:29294454:A:G	rs10126023	A	G	G	Hoxd9_MA0913.1	21	0	+	0	0	.
chr9	29404791	29404792	chr9:29404792:T:A	rs944596	T	A	A	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr9	30592033	30592034	chr9:30592034:T:C	rs13300508	T	C	C	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr9	30732510	30732511	chr9:30732511:T:C	rs10969840	T	C	T	Hoxd9_MA0913.1	6	1	-	8.853608248980283	2.0381875812009422	ACAATAAAAA
chr9	31104235	31104236	chr9:31104236:G:A	rs16916502	G	A	A	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr9	31142793	31142794	chr9:31142794:G:A	rs2050409	G	A	G	Hoxd9_MA0913.1	18	0	+	0	0	.
chr9	31146570	31146571	chr9:31146571:C:T	rs10813478	C	T	T	Hoxd9_MA0913.1	16	0	-	0	0	.
chr9	31146595	31146596	chr9:31146596:G:T	rs10813479	G	T	G	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr9	31146738	31146739	chr9:31146739:C:T	rs10813481	C	T	T	Hoxd9_MA0913.1	27	0	-	0	0	.
chr9	31186339	31186340	chr9:31186340:T:C	rs2225639	T	C	T	Hoxd9_MA0913.1	29	0	+	0	0	.
chr9	31774738	31774739	chr9:31774739:T:G	rs7031669	T	G	T	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr9	31774743	31774744	chr9:31774744:C:T	rs75049619	C	T	c	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr9	32337853	32337854	chr9:32337854:T:C	rs9792594	T	C	T	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr9	32470484	32470485	chr9:32470485:C:A	rs73479419	C	A	C	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr9	32579733	32579734	chr9:32579734:G:T	rs72712923	G	T	G	Hoxd9_MA0913.1	10	0	+	0	0	.
chr9	32821062	32821063	chr9:32821063:A:G	rs664407	A	G	A	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr9	32899370	32899371	chr9:32899371:C:G	rs10971200	C	G	C	Hoxd9_MA0913.1	0	1	-	8.490366725581566	7.012368057198309	GTCATTAAAA
chr9	33677598	33677599	chr9:33677599:C:T	rs540278617	C	T	.	Hoxd9_MA0913.1	10	0	-	0	0	.
chr9	33677601	33677602	chr9:33677602:T:C	rs10814027	T	C	.	Hoxd9_MA0913.1	7	1	-	8.812437826870472	1.9732933495161296	ACAATTAAAA
chr9	33678145	33678146	chr9:33678146:C:A	rs855460	C	A	.	Hoxd9_MA0913.1	9	1	-	8.334848631621252	9.55752993525279	GCAATAAAAG
chr9	33678414	33678415	chr9:33678415:A:C	rs7861919	A	C	.	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr9	33700436	33700437	chr9:33700437:T:G	rs143760176	T	G	T	Hoxd9_MA0913.1	29	0	-	0	0	.
chr9	33715239	33715240	chr9:33715240:T:C	rs2049809	T	C	T	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr9	33881900	33881901	chr9:33881901:G:A	rs115013352	G	A	G	Hoxd9_MA0913.1	25	0	+	0	0	.
chr9	34346283	34346284	chr9:34346284:C:T	rs61573237	C	T	C	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr9	34376230	34376231	chr9:34376231:T:G	rs577791813	T	G	T	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr9	34463413	34463414	chr9:34463414:A:C	rs7868688	A	C	C	Hoxd9_MA0913.1	25	0	+	0	0	.
chr9	35085148	35085149	chr9:35085149:A:G	rs546982	A	G	A	Hoxd9_MA0913.1	16	0	+	0	0	.
chr9	35370485	35370486	chr9:35370486:A:G	chr9:35370486:A:G	A	G	A	Hoxd9_MA0913.1	9	1	-	8.246554688443613	7.408328310329255	GTCATTAAAT
chr9	35374984	35374985	chr9:35374985:G:A	rs2149368	G	A	G	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr9	35681124	35681125	chr9:35681125:C:A	rs1048638	C	A	C	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr9	35833906	35833907	chr9:35833907:C:T	rs115107501	C	T	C	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr9	36019491	36019492	chr9:36019492:A:C	rs76414757	A	C	A	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr9	36163906	36163907	chr9:36163907:T:C	rs41277095	T	C	T	Hoxd9_MA0913.1	26	0	+	0	0	.
chr9	36424737	36424738	chr9:36424738:G:A	rs4879992	G	A	G	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr9	36725672	36725673	chr9:36725673:C:T	rs7027081	C	T	C	Hoxd9_MA0913.1	16	0	+	0	0	.
chr9	36725675	36725676	chr9:36725676:C:T	rs7027082	C	T	T	Hoxd9_MA0913.1	19	0	+	0	0	.
chr9	36862183	36862184	chr9:36862184:A:T	rs73648155	A	T	A	Hoxd9_MA0913.1	9	1	+	8.879672775420401	8.635860738282448	GCCATAAAAA
chr9	36866663	36866664	chr9:36866664:C:T	rs75377918	C	T	C	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr9	37149982	37149983	chr9:37149983:T:A	rs79679901	T	A	T	Hoxd9_MA0913.1	24	0	-	0	0	.
chr9	37248795	37248796	chr9:37248796:C:A	rs7869485	C	A	A	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr9	37294107	37294108	chr9:37294108:A:G	rs191091694	A	G	A	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr9	37420319	37420320	chr9:37420320:G:A	rs60485412	G	A	G	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr9	37467628	37467629	chr9:37467629:C:T	rs549101228	C	T	C	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr9	37494107	37494108	chr9:37494108:C:T	rs10814568	C	T	C	Hoxd9_MA0913.1	29	0	-	0	0	.
chr9	37731179	37731180	chr9:37731180:T:G	rs2274323	T	G	T	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr9	37936466	37936467	chr9:37936467:C:A	rs776021	C	A	A	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr9	37951356	37951357	chr9:37951357:A:C	rs16934662	A	C	A	Hoxd9_MA0913.1	9	1	+	8.812437826870472	7.73039941161816	ACAATTAAAA
chr9	37992121	37992122	chr9:37992122:C:T	rs10973633	C	T	C	Hoxd9_MA0913.1	21	0	+	0	0	.
chr9	37998831	37998832	chr9:37998832:T:G	rs7856252	T	G	T	Hoxd9_MA0913.1	10	0	+	0	0	.
chr9	38087455	38087456	chr9:38087456:C:T	rs11792690	C	T	C	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr9	38263798	38263799	chr9:38263799:C:G	rs181463835	C	G	C	Hoxd9_MA0913.1	14	0	+	0	0	.
chr9	38674218	38674219	chr9:38674219:A:G	rs7861861	A	G	A	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr9	39036022	39036023	chr9:39036023:A:C	rs796651381	A	C	-	Hoxd9_MA0913.1	11	0	+	0	0	.
chr9	39036032	39036033	chr9:39036033:G:T	rs796189180	G	T	-	Hoxd9_MA0913.1	21	0	+	0	0	.
chr9	39040564	39040565	chr9:39040565:T:C	rs7855210	T	C	T	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr9	40130298	40130299	chr9:40130299:G:C	rs201855967	G	C	g	Hoxd9_MA0913.1	20	0	-	0	0	.
chr9	40935570	40935571	chr9:40935571:G:A	rs1260361194	G	A	.	Hoxd9_MA0913.1	16	0	+	0	0	.
chr9	40935576	40935577	chr9:40935577:G:A	rs1312962314	G	A	.	Hoxd9_MA0913.1	22	0	+	0	0	.
chr9	41623970	41623971	chr9:41623971:T:C	rs77200194	T	C	T	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr9	41923877	41923878	chr9:41923878:C:T	rs747621437	C	T	C	Hoxd9_MA0913.1	0	1	-	8.334848631621252	7.387114908210791	GCAATAAAAG
chr9	42359374	42359375	chr9:42359375:T:G	rs1438314909	T	G	T	Hoxd9_MA0913.1	4	1	+	8.879672775420401	5.5875385236454225	GCCATAAAAA
chr9	62803250	62803251	chr9:62803251:G:T	rs112214359	G	T	.	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr9	62814657	62814658	chr9:62814658:C:T	rs7026273	C	T	.	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr9	62816352	62816353	chr9:62816353:G:T	rs12156468	G	T	.	Hoxd9_MA0913.1	16	0	+	0	0	.
chr9	63775344	63775345	chr9:63775345:G:T	rs370678673	G	T	.	Hoxd9_MA0913.1	28	0	-	0	0	.
chr9	63775355	63775356	chr9:63775356:A:G	rs200187412	A	G	.	Hoxd9_MA0913.1	17	0	-	0	0	.
chr9	64515730	64515731	chr9:64515731:T:G	rs2144267	T	G	T	Hoxd9_MA0913.1	20	0	-	0	0	.
chr9	65676532	65676533	chr9:65676533:C:G	rs75002728	C	G	.	Hoxd9_MA0913.1	15	0	+	0	0	.
chr9	66888737	66888738	chr9:66888738:T:C	rs71508281	T	C	N	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr9	68770205	68770206	chr9:68770206:C:T	rs80305461	C	T	C	Hoxd9_MA0913.1	14	0	+	0	0	.
chr9	68925316	68925317	chr9:68925317:A:G	rs7863440	A	G	A	Hoxd9_MA0913.1	24	0	+	0	0	.
chr9	69077468	69077469	chr9:69077469:A:G	rs10869821	A	G	G	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr9	69420645	69420646	chr9:69420646:C:T	rs1331971	C	T	C	Hoxd9_MA0913.1	20	0	-	0	0	.
chr9	69483843	69483844	chr9:69483844:G:A	rs1331974	G	A	G	Hoxd9_MA0913.1	0	1	+	7.984561357794846	7.0368276343843865	GCAATAAAGT
chr9	69517480	69517481	chr9:69517481:T:G	chr9:69517481:T:G	T	G	T	Hoxd9_MA0913.1	2	1	-	8.678133135028622	7.75646393805828	GCAATTAAAC
chr9	69548585	69548586	chr9:69548586:G:A	rs11789317	G	A	G	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr9	69810342	69810343	chr9:69810343:T:C	rs72723211	T	C	T	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr9	69867163	69867164	chr9:69867164:G:T	rs10122385	G	T	G	Hoxd9_MA0913.1	27	0	-	0	0	.
chr9	70303974	70303975	chr9:70303975:T:C	rs11998951	T	C	T	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr9	70554819	70554820	chr9:70554820:A:G	rs4744603	A	G	A	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr9	70558265	70558266	chr9:70558266:A:C	rs4517192	A	C	C	Hoxd9_MA0913.1	6	1	+	8.531537147691377	4.056960285023171	GTCATAAAAA
chr9	70568082	70568083	chr9:70568083:T:A	rs10780948	T	A	T	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr9	70638855	70638856	chr9:70638856:C:G	rs10868862	C	G	G	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr9	70952223	70952224	chr9:70952224:A:G	rs13284434	A	G	A	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr9	70976064	70976065	chr9:70976065:G:C	rs2909293	G	C	G	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr9	71217569	71217570	chr9:71217570:G:A	rs12346443	G	A	G	Hoxd9_MA0913.1	15	0	+	0	0	.
chr9	71384737	71384738	chr9:71384738:A:C	rs12346486	A	C	A	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr9	71524351	71524352	chr9:71524352:C:T	rs12552118	C	T	C	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr9	71524367	71524368	chr9:71524368:A:G	rs12553448	A	G	A	Hoxd9_MA0913.1	3	1	+	8.490366725581566	6.662747785086463	GTCATTAAAA
chr9	71714351	71714352	chr9:71714352:A:G	rs1831271	A	G	A	Hoxd9_MA0913.1	10	0	-	0	0	.
chr9	71725855	71725856	chr9:71725856:T:C	rs11142976	T	C	T	Hoxd9_MA0913.1	11	0	+	0	0	.
chr9	72012722	72012723	chr9:72012723:C:T	rs79833355	C	T	c	Hoxd9_MA0913.1	23	0	-	0	0	.
chr9	72138942	72138943	chr9:72138943:T:C	rs12337244	T	C	C	Hoxd9_MA0913.1	19	0	-	0	0	.
chr9	72356159	72356160	chr9:72356160:G:T	rs118060322	G	T	G	Hoxd9_MA0913.1	19	0	+	0	0	.
chr9	72525537	72525538	chr9:72525538:A:T	chr9:72525538:A:T	A	T	A	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr9	72603302	72603303	chr9:72603303:C:G	rs114158162	C	G	C	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr9	72614331	72614332	chr9:72614332:A:G	rs920901	A	G	A	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr9	72951009	72951010	chr9:72951010:C:T	rs8187872	C	T	C	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr9	73050444	73050445	chr9:73050445:G:A	rs1333457272	G	A	G	Hoxd9_MA0913.1	27	0	+	0	0	.
chr9	73082452	73082453	chr9:73082453:G:A	rs74856225	G	A	G	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr9	73161735	73161736	chr9:73161736:A:C	rs10521451	A	C	A	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr9	73594283	73594284	chr9:73594284:A:G	rs11143629	A	G	A	Hoxd9_MA0913.1	5	1	+	8.334848631621252	2.1131854787253816	GCAATAAAAG
chr9	73635706	73635707	chr9:73635707:T:C	rs2310399	T	C	T	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr9	73879132	73879133	chr9:73879133:G:A	rs4745264	G	A	G	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr9	74615560	74615561	chr9:74615561:A:G	rs3904058	A	G	G	Hoxd9_MA0913.1	29	0	-	0	0	.
chr9	74662777	74662778	chr9:74662778:T:G	rs12345616	T	G	T	Hoxd9_MA0913.1	25	0	+	0	0	.
chr9	74857149	74857150	chr9:74857150:G:A	rs12378991	G	A	G	Hoxd9_MA0913.1	15	0	+	0	0	.
chr9	75087609	75087610	chr9:75087610:T:C	rs11144223	T	C	T	Hoxd9_MA0913.1	5	1	+	8.490366725581566	5.096735376322007	GTCATTAAAA
chr9	75395129	75395130	chr9:75395130:T:C	rs10114294	T	C	T	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr9	75396824	75396825	chr9:75396825:G:A	rs75718389	G	A	G	Hoxd9_MA0913.1	11	0	+	0	0	.
chr9	75633754	75633755	chr9:75633755:A:C	chr9:75633755:A:C	A	C	A	Hoxd9_MA0913.1	18	0	+	0	0	.
chr9	75649377	75649378	chr9:75649378:T:C	rs12346159	T	C	C	Hoxd9_MA0913.1	15	0	-	0	0	.
chr9	75728356	75728357	chr9:75728357:A:C	rs2209680	A	C	A	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr9	75964351	75964352	chr9:75964352:T:C	rs10781321	T	C	T	Hoxd9_MA0913.1	23	0	-	0	0	.
chr9	76097730	76097731	chr9:76097731:T:C	rs113948459	T	C	T	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr9	76303393	76303394	chr9:76303394:G:A	rs7043376	G	A	G	Hoxd9_MA0913.1	26	0	+	0	0	.
chr9	76307183	76307184	chr9:76307184:T:G	rs2351466	T	G	T	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr9	76530797	76530798	chr9:76530798:G:T	rs4744794	G	T	g	Hoxd9_MA0913.1	25	0	+	0	0	.
chr9	76586447	76586448	chr9:76586448:A:G	chr9:76586448:A:G	A	G	A	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr9	76690947	76690948	chr9:76690948:G:A	rs579025	G	A	A	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr9	76799657	76799658	chr9:76799658:C:A	rs11145075	C	A	C	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr9	76867060	76867061	chr9:76867061:G:A	rs114658846	G	A	G	Hoxd9_MA0913.1	14	0	+	0	0	.
chr9	77520977	77520978	chr9:77520978:G:A	rs11145457	G	A	G	Hoxd9_MA0913.1	-5	0	-	0	0	.
chr9	77524642	77524643	chr9:77524643:T:C	rs10781442	T	C	C	Hoxd9_MA0913.1	26	0	-	0	0	.
chr9	77536666	77536667	chr9:77536667:C:T	rs114245838	C	T	C	Hoxd9_MA0913.1	27	0	-	0	0	.
chr9	77606171	77606172	chr9:77606172:C:T	rs73651576	C	T	C	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr9	78029025	78029026	chr9:78029026:T:C	rs10870010	T	C	T	Hoxd9_MA0913.1	15	0	+	0	0	.
chr9	78072054	78072055	chr9:78072055:A:G	rs10781487	A	G	G	Hoxd9_MA0913.1	24	0	+	0	0	.
chr9	78235012	78235013	chr9:78235013:C:G	rs10867165	C	G	G	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr9	78361559	78361560	chr9:78361560:A:G	rs17197465	A	G	A	Hoxd9_MA0913.1	8	1	+	8.490366725581566	6.917398148123624	GTCATTAAAA
chr9	78506435	78506436	chr9:78506436:C:T	rs2993700	C	T	T	Hoxd9_MA0913.1	12	0	+	0	0	.
chr9	78602579	78602580	chr9:78602580:T:C	rs769290	T	C	T	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr9	78769268	78769269	chr9:78769269:G:A	rs17788621	G	A	G	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr9	78775078	78775079	chr9:78775079:G:A	rs7861405	G	A	A	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr9	78872109	78872110	chr9:78872110:A:C	rs12376674	A	C	A	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr9	78967842	78967843	chr9:78967843:A:G	chr9:78967843:A:G	A	G	A	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr9	79256667	79256668	chr9:79256668:G:A	rs140009626	G	A	G	Hoxd9_MA0913.1	19	0	-	0	0	.
chr9	79352647	79352648	chr9:79352648:A:T	rs10867365	A	T	A	Hoxd9_MA0913.1	11	0	-	0	0	.
chr9	79377577	79377578	chr9:79377578:T:G	rs141317023	T	G	T	Hoxd9_MA0913.1	-6	0	-	0	0	.
chr9	79572376	79572377	chr9:79572377:A:T	rs77036232	A	T	A	Hoxd9_MA0913.1	17	0	+	0	0	.
chr9	79610834	79610835	chr9:79610835:C:G	rs76032197	C	G	A	Hoxd9_MA0913.1	11	0	-	0	0	.
chr9	79611122	79611123	chr9:79611123:A:G	rs144239491	A	G	T	Hoxd9_MA0913.1	4	1	-	9.801341972390743	6.509207720615763	GCAATAAAAA
chr9	79686424	79686425	chr9:79686425:C:A	rs10867413	C	A	C	Hoxd9_MA0913.1	18	0	+	0	0	.
chr9	80406656	80406657	chr9:80406657:C:T	rs11138651	C	T	C	Hoxd9_MA0913.1	21	0	-	0	0	.
chr9	80557861	80557862	chr9:80557862:A:G	rs10746661	A	G	A	Hoxd9_MA0913.1	19	0	-	0	0	.
chr9	80695174	80695175	chr9:80695175:A:G	rs6559579	A	G	A	Hoxd9_MA0913.1	19	0	+	0	0	.
chr9	80798866	80798867	chr9:80798867:A:G	rs189315336	A	G	A	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr9	80811107	80811108	chr9:80811108:A:C	rs62578262	A	C	A	Hoxd9_MA0913.1	12	0	-	0	0	.
chr9	81142011	81142012	chr9:81142012:C:T	rs55760593	C	T	C	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr9	81394709	81394710	chr9:81394710:T:C	rs3908631	T	C	C	Hoxd9_MA0913.1	20	0	-	0	0	.
chr9	81416979	81416980	chr9:81416980:T:C	rs7039603	T	C	T	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr9	81416982	81416983	chr9:81416983:G:A	rs148103628	G	A	G	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr9	81686380	81686381	chr9:81686381:A:G	rs77830683	A	G	A	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr9	82270055	82270056	chr9:82270056:G:T	rs12337518	G	T	G	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr9	82726825	82726826	chr9:82726826:G:A	rs502630	G	A	G	Hoxd9_MA0913.1	10	0	-	0	0	.
chr9	82736841	82736842	chr9:82736842:A:G	rs7869543	A	G	A	Hoxd9_MA0913.1	21	0	-	0	0	.
chr9	82820468	82820469	chr9:82820469:G:A	rs986486	G	A	A	Hoxd9_MA0913.1	12	0	+	0	0	.
chr9	82841575	82841576	chr9:82841576:T:C	rs72740806	T	C	T	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr9	82895706	82895707	chr9:82895707:T:C	rs72740822	T	C	T	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr9	83239649	83239650	chr9:83239650:T:C	rs4460465	T	C	T	Hoxd9_MA0913.1	29	0	-	0	0	.
chr9	83470900	83470901	chr9:83470901:T:G	rs7034871	T	G	T	Hoxd9_MA0913.1	28	0	+	0	0	.
chr9	83701988	83701989	chr9:83701989:G:C	rs11140219	G	C	G	Hoxd9_MA0913.1	11	0	+	0	0	.
chr9	83701992	83701993	chr9:83701993:T:G	rs77665820	T	G	G	Hoxd9_MA0913.1	15	0	+	0	0	.
chr9	84140524	84140525	chr9:84140525:G:A	rs138285593	G	A	G	Hoxd9_MA0913.1	14	0	-	0	0	.
chr9	84173392	84173393	chr9:84173393:C:T	rs10868109	C	T	C	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr9	84228336	84228337	chr9:84228337:A:C	rs10121960	A	C	A	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr9	84337791	84337792	chr9:84337792:A:T	rs77488521	A	T	T	Hoxd9_MA0913.1	16	0	+	0	0	.
chr9	84711794	84711795	chr9:84711795:T:G	rs543183161	T	G	T	Hoxd9_MA0913.1	28	0	+	0	0	.
chr9	84718826	84718827	chr9:84718827:G:A	rs2489162	G	A	A	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr9	84799878	84799879	chr9:84799879:A:G	rs1187287	A	G	G	Hoxd9_MA0913.1	21	0	+	0	0	.
chr9	84839294	84839295	chr9:84839295:A:G	rs79429734	A	G	A	Hoxd9_MA0913.1	5	1	-	8.282172881897674	4.888541532638117	CCAATTAAAA
chr9	84951477	84951478	chr9:84951478:A:C	rs1006446	A	C	C	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr9	85189297	85189298	chr9:85189298:C:T	rs150981270	C	T	C	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr9	85292960	85292961	chr9:85292961:A:G	rs2841475	A	G	A	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr9	85335343	85335344	chr9:85335344:G:A	rs7040018	G	A	G	Hoxd9_MA0913.1	17	0	-	0	0	.
chr9	85610710	85610711	chr9:85610711:C:A	rs62566922	C	A	A	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr9	85740787	85740788	chr9:85740788:G:T	rs117993023	G	T	.	Hoxd9_MA0913.1	21	0	+	0	0	.
chr9	86337397	86337398	chr9:86337398:A:C	rs10512175	A	C	A	Hoxd9_MA0913.1	25	0	+	0	0	.
chr9	86494870	86494871	chr9:86494871:C:A	rs114984259	C	A	C	Hoxd9_MA0913.1	0	1	-	8.246554688443613	5.209411992490743	GTCATTAAAT
chr9	86494928	86494929	chr9:86494929:A:G	rs149752659	A	G	A	Hoxd9_MA0913.1	4	1	-	8.853608248980283	5.561473997205303	ACAATAAAAA
chr9	86634399	86634400	chr9:86634400:G:A	rs10868454	G	A	G	Hoxd9_MA0913.1	0	1	+	9.453206344661718	8.505472621251258	GTAATAAAAA
chr9	86634410	86634411	chr9:86634411:T:G	rs12238479	T	G	T	Hoxd9_MA0913.1	11	0	+	0	0	.
chr9	86700552	86700553	chr9:86700553:A:T	rs1331442	A	T	T	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr9	86715412	86715413	chr9:86715413:A:G	rs10868473	A	G	G	Hoxd9_MA0913.1	23	0	-	0	0	.
chr9	86763351	86763352	chr9:86763352:G:A	rs10746786	G	A	G	Hoxd9_MA0913.1	9	1	-	7.7976343601680895	8.635860738282448	GCCATAAAAC
chr9	86960887	86960888	chr9:86960888:T:C	rs113523325	T	C	T	Hoxd9_MA0913.1	3	1	-	8.838502353310592	7.010883412815486	GCCATTAAAA
chr9	87201291	87201292	chr9:87201292:C:A	rs141014284	C	A	C	Hoxd9_MA0913.1	18	0	-	0	0	.
chr9	87201292	87201293	chr9:87201293:C:T	rs112662890	C	T	C	Hoxd9_MA0913.1	17	0	-	0	0	.
chr9	87212376	87212377	chr9:87212377:C:G	rs10780812	C	G	C	Hoxd9_MA0913.1	16	0	+	0	0	.
chr9	87276406	87276407	chr9:87276407:T:C	rs144095549	T	C	T	Hoxd9_MA0913.1	6	1	-	8.329997507299597	1.5145768395202555	GTAATTAAAC
chr9	87276411	87276412	chr9:87276412:A:G	rs148703428	A	G	A	Hoxd9_MA0913.1	1	1	-	8.329997507299597	8.678133135028622	GTAATTAAAC
chr9	87294383	87294384	chr9:87294384:A:G	rs7873742	A	G	A	Hoxd9_MA0913.1	9	1	-	8.246554688443613	7.408328310329255	GTCATTAAAT
chr9	87323030	87323031	chr9:87323031:G:A	rs73652365	G	A	G	Hoxd9_MA0913.1	0	1	+	9.209394307523764	8.261660584113304	GTAATAAAAT
chr9	87329489	87329490	chr9:87329490:A:G	rs10868558	A	G	g	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr9	87464479	87464480	chr9:87464480:G:A	rs1928474	G	A	A	Hoxd9_MA0913.1	20	0	-	0	0	.
chr9	87569472	87569473	chr9:87569473:A:G	rs36203099	A	G	A	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr9	87620955	87620956	chr9:87620956:C:T	rs117037200	C	T	C	Hoxd9_MA0913.1	2	1	+	7.3720090125411	1.8433341776606584	GCCATTAAAG
chr9	87751989	87751990	chr9:87751990:G:A	rs10780872	G	A	g	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr9	88328388	88328389	chr9:88328389:G:T	chr9:88328389:G:T	G	T	G	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr9	88619594	88619595	chr9:88619595:T:C	rs75713403	T	C	C	Hoxd9_MA0913.1	14	0	-	0	0	.
chr9	88745689	88745690	chr9:88745690:T:A	rs77620062	T	A	T	Hoxd9_MA0913.1	4	1	+	7.4131794346509094	4.725928010464753	GCCATAAAAG
chr9	88745696	88745697	chr9:88745697:T:C	rs28624420	T	C	C	Hoxd9_MA0913.1	11	0	+	0	0	.
chr9	88768820	88768821	chr9:88768821:A:G	rs4877108	A	G	A	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr9	88805269	88805270	chr9:88805270:A:T	rs9410355	A	T	A	Hoxd9_MA0913.1	12	0	-	0	0	.
chr9	88808554	88808555	chr9:88808555:G:A	rs2818251	G	A	G	Hoxd9_MA0913.1	9	1	+	7.4131794346509094	8.879672775420401	GCCATAAAAG
chr9	88820067	88820068	chr9:88820068:T:C	rs9410364	T	C	T	Hoxd9_MA0913.1	8	1	-	7.973723031895638	6.4007544544376955	GCAGTAAAAA
chr9	89376153	89376154	chr9:89376154:T:C	rs36050908	T	C	T	Hoxd9_MA0913.1	1	1	+	8.490366725581566	8.838502353310592	GTCATTAAAA
chr9	89470412	89470413	chr9:89470413:C:A	chr9:89470413:C:A	C	A	C	Hoxd9_MA0913.1	1	1	+	9.760171550280933	7.340353174255673	GCAATTAAAA
chr9	89478531	89478532	chr9:89478532:T:C	rs7850772	T	C	T	Hoxd9_MA0913.1	5	1	-	8.879672775420401	2.658009622524533	GCCATAAAAA
chr9	89686138	89686139	chr9:89686139:T:C	rs10120215	T	C	T	Hoxd9_MA0913.1	14	0	+	0	0	.
chr9	89729227	89729228	chr9:89729228:G:A	rs1046803695	G	A	G	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr9	89755879	89755880	chr9:89755880:G:T	rs11265920	G	T	G	Hoxd9_MA0913.1	18	0	-	0	0	.
chr9	89766952	89766953	chr9:89766953:C:T	rs9330441	C	T	T	Hoxd9_MA0913.1	20	0	-	0	0	.
chr9	89788231	89788232	chr9:89788232:G:A	rs10116554	G	A	G	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr9	89843162	89843163	chr9:89843163:T:C	rs1050894024	T	C	T	Hoxd9_MA0913.1	3	1	-	9.209394307523764	7.381775367028661	GTAATAAAAT
chr9	89877588	89877589	chr9:89877589:G:A	rs977832906	G	A	G	Hoxd9_MA0913.1	0	1	+	7.3720090125411	6.424275289130639	GCCATTAAAG
chr9	90365910	90365911	chr9:90365911:G:A	rs61533721	G	A	G	Hoxd9_MA0913.1	0	1	+	7.943390935685037	6.995657212274576	GCAATTAAGT
chr9	90638005	90638006	chr9:90638006:T:A	rs2035077	T	A	.	Hoxd9_MA0913.1	10	0	-	0	0	.
chr9	90857453	90857454	chr9:90857454:G:A	rs10124093	G	A	G	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr9	90906044	90906045	chr9:90906045:T:C	rs10993758	T	C	T	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr9	91032633	91032634	chr9:91032634:A:G	rs80234085	A	G	A	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr9	91208082	91208083	chr9:91208083:C:T	rs16907273	C	T	C	Hoxd9_MA0913.1	18	0	+	0	0	.
chr9	91530311	91530312	chr9:91530312:G:A	rs6479353	G	A	G	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr9	91897263	91897264	chr9:91897264:T:C	rs75979691	T	C	T	Hoxd9_MA0913.1	23	0	+	0	0	.
chr9	91948457	91948458	chr9:91948458:C:T	rs149126669	C	T	C	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr9	92001454	92001455	chr9:92001455:G:A	rs79554428	G	A	G	Hoxd9_MA0913.1	29	0	+	0	0	.
chr9	92162808	92162809	chr9:92162809:C:G	rs74738345	C	G	c	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr9	92191724	92191725	chr9:92191725:C:T	rs11791931	C	T	-	Hoxd9_MA0913.1	17	0	-	0	0	.
chr9	92291588	92291589	chr9:92291589:G:T	rs6479416	G	T	T	Hoxd9_MA0913.1	25	0	+	0	0	.
chr9	93161802	93161803	chr9:93161803:G:A	rs4744182	G	A	A	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr9	93194008	93194009	chr9:93194009:A:C	rs2154079	A	C	A	Hoxd9_MA0913.1	17	0	+	0	0	.
chr9	93265969	93265970	chr9:93265970:A:G	rs35795732	A	G	A	Hoxd9_MA0913.1	20	0	-	0	0	.
chr9	94135650	94135651	chr9:94135651:T:C	rs10821300	T	C	T	Hoxd9_MA0913.1	18	0	-	0	0	.
chr9	94263696	94263697	chr9:94263697:C:T	rs3131899	C	T	C	Hoxd9_MA0913.1	11	0	-	0	0	.
chr9	94281244	94281245	chr9:94281245:C:T	rs6479534	C	T	T	Hoxd9_MA0913.1	0	1	-	9.209394307523764	8.261660584113304	GTAATAAAAT
chr9	94533286	94533287	chr9:94533287:T:C	rs77010793	T	C	T	Hoxd9_MA0913.1	4	1	+	7.7976343601680895	4.50550010839311	GCCATAAAAC
chr9	94550301	94550302	chr9:94550302:C:A	rs10761333	C	A	A	Hoxd9_MA0913.1	11	0	-	0	0	.
chr9	94603941	94603942	chr9:94603942:G:A	rs1754435	G	A	G	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr9	94604117	94604118	chr9:94604118:C:T	rs1754436	C	T	T	Hoxd9_MA0913.1	24	0	-	0	0	.
chr9	94673319	94673320	chr9:94673320:A:G	rs180805695	A	G	A	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr9	94741702	94741703	chr9:94741703:T:C	rs7851726	T	C	C	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr9	94805655	94805656	chr9:94805656:G:A	rs533466660	G	A	G	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr9	94819570	94819571	chr9:94819571:G:A	rs73654294	G	A	G	Hoxd9_MA0913.1	12	0	-	0	0	.
chr9	94916084	94916085	chr9:94916085:C:T	rs75294395	C	T	C	Hoxd9_MA0913.1	26	0	-	0	0	.
chr9	95050057	95050058	chr9:95050058:A:G	rs4743982	A	G	A	Hoxd9_MA0913.1	3	1	+	7.4131794346509094	5.585560494155805	GCCATAAAAG
chr9	95306598	95306599	chr9:95306599:T:C	rs148614509	T	C	T	Hoxd9_MA0913.1	26	0	+	0	0	.
chr9	95425957	95425958	chr9:95425958:T:G	rs183678945	T	G	T	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr9	95426431	95426432	chr9:95426432:T:C	rs186883143	T	C	T	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr9	95587019	95587020	chr9:95587020:T:C	rs7041289	T	C	T	Hoxd9_MA0913.1	16	0	+	0	0	.
chr9	95604610	95604611	chr9:95604611:A:G	rs10818905	A	G	A	Hoxd9_MA0913.1	19	0	+	0	0	.
chr9	95734756	95734757	chr9:95734757:G:A	rs62558971	G	A	G	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr9	95742622	95742623	chr9:95742623:G:A	rs414610	G	A	G	Hoxd9_MA0913.1	17	0	+	0	0	.
chr9	95847872	95847873	chr9:95847873:G:A	rs12343734	G	A	G	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr9	95876559	95876560	chr9:95876560:T:G	rs689697	T	G	T	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr9	96030258	96030259	chr9:96030259:A:G	rs1628930	A	G	G	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr9	96064091	96064092	chr9:96064092:G:C	rs76115912	G	C	G	Hoxd9_MA0913.1	18	0	+	0	0	.
chr9	96169879	96169880	chr9:96169880:A:G	rs6479151	A	G	A	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr9	96373240	96373241	chr9:96373241:C:T	rs10990768	C	T	C	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr9	96413290	96413291	chr9:96413291:C:T	rs13291001	C	T	C	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr9	96617531	96617532	chr9:96617532:T:C	rs10978365	T	C	T	Hoxd9_MA0913.1	28	0	+	0	0	.
chr9	97001873	97001874	chr9:97001874:C:A	rs2809729	C	A	a	Hoxd9_MA0913.1	1	1	+	8.187202972822991	5.767384596797731	GCAATTAAGA
chr9	97054074	97054075	chr9:97054075:C:T	rs10739296	C	T	C	Hoxd9_MA0913.1	18	0	-	0	0	.
chr9	97145985	97145986	chr9:97145986:T:C	rs7041241	T	C	C	Hoxd9_MA0913.1	26	0	-	0	0	.
chr9	97511890	97511891	chr9:97511891:C:A	rs7028843	C	A	C	Hoxd9_MA0913.1	16	0	-	0	0	.
chr9	97511891	97511892	chr9:97511892:A:G	rs7044624	A	G	G	Hoxd9_MA0913.1	15	0	-	0	0	.
chr9	97621843	97621844	chr9:97621844:T:C	rs2805775	T	C	C	Hoxd9_MA0913.1	23	0	-	0	0	.
chr9	97705859	97705860	chr9:97705860:C:A	rs72751549	C	A	C	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr9	97710920	97710921	chr9:97710921:C:T	rs80296531	C	T	C	Hoxd9_MA0913.1	16	0	-	0	0	.
chr9	97710945	97710946	chr9:97710946:A:G	rs76006242	A	G	A	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr9	98274983	98274984	chr9:98274984:C:T	rs7859655	C	T	C	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr9	98555638	98555639	chr9:98555639:C:T	rs2900512	C	T	T	Hoxd9_MA0913.1	13	0	-	0	0	.
chr9	98578018	98578019	chr9:98578019:A:C	rs2808536	A	C	C	Hoxd9_MA0913.1	17	0	-	0	0	.
chr9	98578033	98578034	chr9:98578034:T:C	rs3750344	T	C	T	Hoxd9_MA0913.1	2	1	-	9.55752993525279	7.8800714937946905	GCAATAAAAT
chr9	98793053	98793054	chr9:98793054:T:C	rs34785870	T	C	T	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr9	98877317	98877318	chr9:98877318:C:T	rs16917982	C	T	C	Hoxd9_MA0913.1	-4	0	-	0	0	.
chr9	98890372	98890373	chr9:98890373:T:C	rs16918004	T	C	T	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr9	98890390	98890391	chr9:98890391:C:T	rs1028656	C	T	C	Hoxd9_MA0913.1	1	1	+	8.812437826870472	8.464302199141448	ACAATTAAAA
chr9	98900803	98900804	chr9:98900804:C:A	rs732726	C	A	A	Hoxd9_MA0913.1	11	0	-	0	0	.
chr9	99013842	99013843	chr9:99013843:G:A	rs6478966	G	A	A	Hoxd9_MA0913.1	25	0	-	0	0	.
chr9	99027397	99027398	chr9:99027398:G:A	rs58180460	G	A	G	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr9	99041368	99041369	chr9:99041369:T:G	rs532524307	T	G	T	Hoxd9_MA0913.1	12	0	+	0	0	.
chr9	99318967	99318968	chr9:99318968:G:A	rs384317	G	A	G	Hoxd9_MA0913.1	0	1	+	8.187202972822991	7.2394692494125295	GCAATTAAGA
chr9	99392164	99392165	chr9:99392165:A:G	rs7028975	A	G	G	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr9	99489896	99489897	chr9:99489897:T:C	rs2416764	T	C	T	Hoxd9_MA0913.1	11	0	+	0	0	.
chr9	100309101	100309102	chr9:100309102:A:T	rs7035619	A	T	A	Hoxd9_MA0913.1	3	1	+	9.168223885413955	5.553884016284971	GTAATTAAAT
chr9	100578592	100578593	chr9:100578593:T:C	rs1226589	T	C	T	Hoxd9_MA0913.1	15	0	-	0	0	.
chr9	101061577	101061578	chr9:101061578:T:C	rs1361343	T	C	A	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr9	101618887	101618888	chr9:101618888:T:C	rs12685902	T	C	C	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr9	101814299	101814300	chr9:101814300:C:T	rs1985471	C	T	T	Hoxd9_MA0913.1	0	1	-	8.32301137036169	7.375277646951231	GCAATAAATA
chr9	102016737	102016738	chr9:102016738:A:T	rs2995191	A	T	A	Hoxd9_MA0913.1	2	1	+	8.812437826870472	2.3620937950196907	ACAATTAAAA
chr9	102016746	102016747	chr9:102016747:C:G	rs138999117	C	G	C	Hoxd9_MA0913.1	11	0	+	0	0	.
chr9	102212082	102212083	chr9:102212083:A:G	rs10512295	A	G	A	Hoxd9_MA0913.1	7	1	+	7.75646393805828	0.9173194607039366	GCCATTAAAC
chr9	102550452	102550453	chr9:102550453:G:A	rs75205438	G	A	C	Hoxd9_MA0913.1	14	0	+	0	0	.
chr9	102728919	102728920	chr9:102728920:G:A	rs4742855	G	A	A	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr9	103184187	103184188	chr9:103184188:T:A	rs10990602	T	A	T	Hoxd9_MA0913.1	22	0	-	0	0	.
chr9	103206524	103206525	chr9:103206525:C:A	rs7856077	C	A	-	Hoxd9_MA0913.1	1	1	+	8.60979621184233	6.1899778358170705	ACAATAAAAT
chr9	103294203	103294204	chr9:103294204:G:A	rs115755985	G	A	G	Hoxd9_MA0913.1	28	0	-	0	0	.
chr9	103294243	103294244	chr9:103294244:C:T	rs79523244	C	T	C	Hoxd9_MA0913.1	-12	0	-	0	0	.
chr9	103703062	103703063	chr9:103703063:G:A	rs447357	G	A	A	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr9	103768080	103768081	chr9:103768081:G:C	rs1439194	G	C	C	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr9	103904548	103904549	chr9:103904549:T:C	rs10990986	T	C	C	Hoxd9_MA0913.1	25	0	+	0	0	.
chr9	103934882	103934883	chr9:103934883:A:T	rs10991000	A	T	a	Hoxd9_MA0913.1	24	0	-	0	0	.
chr9	104335647	104335648	chr9:104335648:C:T	rs1688666	C	T	T	Hoxd9_MA0913.1	1	1	+	8.123883530932645	7.775747903203619	GCGATAAAAA
chr9	104335650	104335651	chr9:104335651:T:A	rs1688665	T	A	A	Hoxd9_MA0913.1	4	1	+	8.123883530932645	5.4366321067464884	GCGATAAAAA
chr9	104495124	104495125	chr9:104495125:T:C	rs10820650	T	C	t	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr9	104606135	104606136	chr9:104606136:A:G	rs10117926	A	G	A	Hoxd9_MA0913.1	21	0	-	0	0	.
chr9	104606159	104606160	chr9:104606160:A:G	rs57726274	A	G	A	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr9	104747035	104747036	chr9:104747036:A:G	rs2417562	A	G	A	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr9	104859356	104859357	chr9:104859357:A:G	rs2482420	A	G	G	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr9	104968741	104968742	chr9:104968742:G:A	rs140004785	G	A	G	Hoxd9_MA0913.1	12	0	-	0	0	.
chr9	104980199	104980200	chr9:104980200:C:T	rs2027402	C	T	C	Hoxd9_MA0913.1	0	1	-	9.209394307523764	8.261660584113304	GTAATAAAAT
chr9	105063748	105063749	chr9:105063749:A:C	rs187364673	A	C	A	Hoxd9_MA0913.1	26	0	-	0	0	.
chr9	105063756	105063757	chr9:105063757:G:T	rs28497830	G	T	T	Hoxd9_MA0913.1	18	0	-	0	0	.
chr9	105069990	105069991	chr9:105069991:G:A	rs3005727	G	A	G	Hoxd9_MA0913.1	10	0	+	0	0	.
chr9	105102232	105102233	chr9:105102233:T:C	rs4742940	T	C	T	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr9	105154748	105154749	chr9:105154749:G:A	rs7040524	G	A	G	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr9	105311411	105311412	chr9:105311412:G:T	rs80086353	G	T	G	Hoxd9_MA0913.1	15	0	-	0	0	.
chr9	105421466	105421467	chr9:105421467:C:A	rs12340242	C	A	A	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr9	105632611	105632612	chr9:105632612:A:G	rs17250623	A	G	A	Hoxd9_MA0913.1	7	1	+	8.329997507299597	1.490853029945253	GTAATTAAAC
chr9	105698692	105698693	chr9:105698693:A:G	rs10119254	A	G	a	Hoxd9_MA0913.1	4	1	-	8.60979621184233	5.317661960067349	ACAATAAAAT
chr9	105967432	105967433	chr9:105967433:C:T	rs148511474	C	T	C	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr9	105993441	105993442	chr9:105993442:C:A	rs138574160	C	A	C	Hoxd9_MA0913.1	13	0	-	0	0	.
chr9	106000438	106000439	chr9:106000439:T:C	rs10117207	T	C	C	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr9	106449279	106449280	chr9:106449280:A:G	rs2417709	A	G	G	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr9	106449298	106449299	chr9:106449299:A:G	rs76411472	A	G	A	Hoxd9_MA0913.1	3	1	+	8.246554688443613	6.41893574794851	GTCATTAAAT
chr9	106456345	106456346	chr9:106456346:C:T	rs2900412	C	T	C	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr9	106481425	106481426	chr9:106481426:T:C	rs74517283	T	C	C	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr9	106560770	106560771	chr9:106560771:A:G	rs962396	A	G	a	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr9	106587131	106587132	chr9:106587132:A:G	rs6477531	A	G	A	Hoxd9_MA0913.1	3	1	+	8.323343304007485	6.495724363512382	CCAATAAAAA
chr9	106682836	106682837	chr9:106682837:C:T	rs190550946	C	T	C	Hoxd9_MA0913.1	23	0	+	0	0	.
chr9	106860568	106860569	chr9:106860569:G:T	chr9:106860569:G:T	G	T	G	Hoxd9_MA0913.1	13	0	-	0	0	.
chr9	106865769	106865770	chr9:106865770:A:G	rs73667301	A	G	A	Hoxd9_MA0913.1	4	1	-	8.282172881897674	4.9900386301226956	CCAATTAAAA
chr9	106933771	106933772	chr9:106933772:T:C	rs78894169	T	C	T	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr9	107172717	107172718	chr9:107172718:T:C	rs10978738	T	C	T	Hoxd9_MA0913.1	14	0	+	0	0	.
chr9	107221439	107221440	chr9:107221440:G:C	rs13300159	G	C	G	Hoxd9_MA0913.1	10	0	+	0	0	.
chr9	107299633	107299634	chr9:107299634:C:T	rs11573659	C	T	C	Hoxd9_MA0913.1	24	0	-	0	0	.
chr9	107347625	107347626	chr9:107347626:C:T	rs76431194	C	T	C	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr9	107368949	107368950	chr9:107368950:G:A	rs75892491	G	A	G	Hoxd9_MA0913.1	20	0	+	0	0	.
chr9	107455460	107455461	chr9:107455461:C:A	rs882942	C	A	C	Hoxd9_MA0913.1	0	1	-	7.932552609785828	4.8954099138329585	GCAGTTAAAA
chr9	107621301	107621302	chr9:107621302:A:G	rs1110403	A	G	G	Hoxd9_MA0913.1	22	0	-	0	0	.
chr9	107743655	107743656	chr9:107743656:G:A	rs4376551	G	A	G	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr9	107786773	107786774	chr9:107786774:C:A	rs944170	C	A	C	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr9	107931926	107931927	chr9:107931927:G:T	rs10979110	G	T	G	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr9	107972881	107972882	chr9:107972882:A:C	rs562125	A	C	A	Hoxd9_MA0913.1	16	0	+	0	0	.
chr9	108053884	108053885	chr9:108053885:G:A	chr9:108053885:G:A	G	A	G	Hoxd9_MA0913.1	17	0	+	0	0	.
chr9	108142456	108142457	chr9:108142457:C:T	rs559603	C	T	T	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr9	108142457	108142458	chr9:108142458:T:C	rs76554122	T	C	T	Hoxd9_MA0913.1	-2	0	+	0	0	.
chr9	108211762	108211763	chr9:108211763:C:G	rs609982	C	G	G	Hoxd9_MA0913.1	21	0	+	0	0	.
chr9	108235136	108235137	chr9:108235137:G:A	rs111556338	G	A	G	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr9	108260244	108260245	chr9:108260245:G:A	rs7030526	G	A	G	Hoxd9_MA0913.1	24	0	+	0	0	.
chr9	108744286	108744287	chr9:108744287:T:C	rs13301088	T	C	T	Hoxd9_MA0913.1	12	0	+	0	0	.
chr9	108812687	108812688	chr9:108812688:T:C	rs150424401	T	C	T	Hoxd9_MA0913.1	2	1	-	8.329997507299597	6.652539065841498	GTAATTAAAC
chr9	108860694	108860695	chr9:108860695:G:A	rs11794127	G	A	G	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr9	109161750	109161751	chr9:109161751:T:C	rs16913858	T	C	T	Hoxd9_MA0913.1	20	0	-	0	0	.
chr9	109348447	109348448	chr9:109348448:G:C	rs7019068	G	C	C	Hoxd9_MA0913.1	0	1	+	9.51635951314298	8.03836084475972	GCAATTAAAT
chr9	109457193	109457194	chr9:109457194:C:G	rs3793524	C	G	G	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr9	109998012	109998013	chr9:109998013:G:T	rs12555129	G	T	G	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr9	110157818	110157819	chr9:110157819:G:A	rs7023507	G	A	G	Hoxd9_MA0913.1	-14	0	-	0	0	.
chr9	110389432	110389433	chr9:110389433:T:C	rs2296779	T	C	T	Hoxd9_MA0913.1	2	1	-	9.412035922551908	7.73457748109381	GTAATTAAAA
chr9	110537925	110537926	chr9:110537926:C:T	rs10759440	C	T	C	Hoxd9_MA0913.1	16	0	-	0	0	.
chr9	110546378	110546379	chr9:110546379:G:T	rs187219205	G	T	G	Hoxd9_MA0913.1	25	0	+	0	0	.
chr9	110581274	110581275	chr9:110581275:C:T	rs4978938	C	T	T	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr9	110766116	110766117	chr9:110766117:T:A	rs2821149	T	A	T	Hoxd9_MA0913.1	29	0	-	0	0	.
chr9	110769304	110769305	chr9:110769305:T:C	rs2766998	T	C	C	Hoxd9_MA0913.1	17	0	+	0	0	.
chr9	110782862	110782863	chr9:110782863:C:T	rs55957860	C	T	C	Hoxd9_MA0913.1	16	0	-	0	0	.
chr9	110870565	110870566	chr9:110870566:G:C	rs567334	G	C	G	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr9	110895499	110895500	chr9:110895500:C:T	rs12001422	C	T	C	Hoxd9_MA0913.1	19	0	-	0	0	.
chr9	111154668	111154669	chr9:111154669:A:T	rs17811749	A	T	A	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr9	111299711	111299712	chr9:111299712:G:C	chr9:111299712:G:C	G	C	G	Hoxd9_MA0913.1	-3	0	+	0	0	.
chr9	111316915	111316916	chr9:111316916:T:G	rs314450	T	G	T	Hoxd9_MA0913.1	-18	0	+	0	0	.
chr9	111316946	111316947	chr9:111316947:T:A	rs314449	T	A	A	Hoxd9_MA0913.1	13	0	+	0	0	.
chr9	111482125	111482126	chr9:111482126:T:C	rs10980910	T	C	T	Hoxd9_MA0913.1	5	1	+	8.282172881897674	4.888541532638117	CCAATTAAAA
chr9	111604842	111604843	chr9:111604843:G:A	rs59773154	G	A	G	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr9	111627929	111627930	chr9:111627930:C:A	rs75372283	C	A	A	Hoxd9_MA0913.1	15	0	-	0	0	.
chr9	111731986	111731987	chr9:111731987:A:T	rs945847	A	T	T	Hoxd9_MA0913.1	16	0	+	0	0	.
chr9	111731999	111732000	chr9:111732000:A:T	rs34899379	A	T	T	Hoxd9_MA0913.1	29	0	+	0	0	.
chr9	111755003	111755004	chr9:111755004:A:G	rs6477849	A	G	G	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr9	111924479	111924480	chr9:111924480:G:A	rs76032073	G	A	G	Hoxd9_MA0913.1	-16	0	+	0	0	.
chr9	111985200	111985201	chr9:111985201:G:A	rs12000633	G	A	G	Hoxd9_MA0913.1	25	0	+	0	0	.
chr9	112043568	112043569	chr9:112043569:T:C	rs7034523	T	C	C	Hoxd9_MA0913.1	29	0	-	0	0	.
chr9	112059321	112059322	chr9:112059322:T:C	rs115347696	T	C	T	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr9	112064903	112064904	chr9:112064904:G:A	rs10817259	G	A	G	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr9	112069615	112069616	chr9:112069616:G:A	rs28655161	G	A	A	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr9	112126054	112126055	chr9:112126055:C:T	rs75496980	C	T	T	Hoxd9_MA0913.1	12	0	-	0	0	.
chr9	112206026	112206027	chr9:112206027:T:G	rs138947266	T	G	T	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr9	112308936	112308937	chr9:112308937:A:C	rs6477912	A	C	A	Hoxd9_MA0913.1	-11	0	+	0	0	.
chr9	112488114	112488115	chr9:112488115:A:G	rs148657357	A	G	A	Hoxd9_MA0913.1	3	1	+	7.801678332738202	5.974059392243097	GCAATAAACA
chr9	112671093	112671094	chr9:112671094:G:C	rs4979145	G	C	C	Hoxd9_MA0913.1	-14	0	+	0	0	.
chr9	112852960	112852961	chr9:112852961:T:G	rs10733596	T	G	G	Hoxd9_MA0913.1	24	0	-	0	0	.
chr9	112852970	112852971	chr9:112852971:C:T	rs10733597	C	T	T	Hoxd9_MA0913.1	14	0	-	0	0	.
chr9	113309429	113309430	chr9:113309430:C:T	rs73655857	C	T	C	Hoxd9_MA0913.1	20	0	-	0	0	.
chr9	113355344	113355345	chr9:113355345:G:T	rs12344264	G	T	G	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr9	113705772	113705773	chr9:113705773:C:T	rs75260470	C	T	C	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr9	113724303	113724304	chr9:113724304:C:T	rs10123658	C	T	C	Hoxd9_MA0913.1	12	0	+	0	0	.
chr9	113782125	113782126	chr9:113782126:T:G	rs10981922	T	G	T	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr9	113782163	113782164	chr9:113782164:T:C	rs75730593	T	C	T	Hoxd9_MA0913.1	23	0	+	0	0	.
chr9	113886532	113886533	chr9:113886533:C:A	rs10120883	C	A	A	Hoxd9_MA0913.1	10	0	-	0	0	.
chr9	113940205	113940206	chr9:113940206:G:C	rs115344591	G	C	G	Hoxd9_MA0913.1	1	1	-	8.719303557138431	5.626738544853718	GCAATAAAAC
chr9	113953886	113953887	chr9:113953887:A:G	rs66526429	A	G	A	Hoxd9_MA0913.1	21	0	+	0	0	.
chr9	114047189	114047190	chr9:114047190:C:A	rs1008138	C	A	A	Hoxd9_MA0913.1	-12	0	+	0	0	.
chr9	114159838	114159839	chr9:114159839:G:A	rs75507422	G	A	G	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr9	114202961	114202962	chr9:114202962:G:A	rs11794643	G	A	G	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr9	114587550	114587551	chr9:114587551:G:C	rs953123656	G	C	G	Hoxd9_MA0913.1	10	0	+	0	0	.
chr9	114587553	114587554	chr9:114587554:G:A	rs189533073	G	A	G	Hoxd9_MA0913.1	13	0	+	0	0	.
chr9	114610328	114610329	chr9:114610329:G:A	rs7851940	G	A	G	Hoxd9_MA0913.1	27	0	-	0	0	.
chr9	114689615	114689616	chr9:114689616:C:T	rs11788229	C	T	C	Hoxd9_MA0913.1	15	0	+	0	0	.
chr9	114856376	114856377	chr9:114856377:T:A	rs10119266	T	A	A	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr9	114856389	114856390	chr9:114856390:A:T	rs10122171	A	T	T	Hoxd9_MA0913.1	7	1	+	7.973723031895638	4.679876280177208	GCAGTAAAAA
chr9	114905162	114905163	chr9:114905163:T:C	rs3181362	T	C	T	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr9	115157296	115157297	chr9:115157297:T:C	rs10982575	T	C	T	Hoxd9_MA0913.1	-13	0	+	0	0	.
chr9	115157324	115157325	chr9:115157325:G:C	chr9:115157325:G:C	G	C	G	Hoxd9_MA0913.1	15	0	+	0	0	.
chr9	115249770	115249771	chr9:115249771:G:A	rs12380804	G	A	G	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr9	115321924	115321925	chr9:115321925:G:A	rs4979517	G	A	A	Hoxd9_MA0913.1	10	0	-	0	0	.
chr9	115327710	115327711	chr9:115327711:C:T	rs10759769	C	T	T	Hoxd9_MA0913.1	1	1	+	8.2283733949328	7.880237767203775	GCAATAAAGA
chr9	115439894	115439895	chr9:115439895:G:A	rs73554815	G	A	G	Hoxd9_MA0913.1	15	0	-	0	0	.
chr9	115439907	115439908	chr9:115439908:C:T	rs7042718	C	T	T	Hoxd9_MA0913.1	2	1	-	8.082713108822833	9.760171550280933	GCGATTAAAA
chr9	115470086	115470087	chr9:115470087:T:G	rs756084565	T	G	T	Hoxd9_MA0913.1	28	0	+	0	0	.
chr9	115690826	115690827	chr9:115690827:A:G	rs10817820	A	G	A	Hoxd9_MA0913.1	-3	0	-	0	0	.
chr9	115892280	115892281	chr9:115892281:T:C	rs1157190210	T	C	T	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr9	115976749	115976750	chr9:115976750:A:G	rs10983043	A	G	a	Hoxd9_MA0913.1	3	1	+	9.55752993525279	7.7299109947576845	GCAATAAAAT
chr9	116142132	116142133	chr9:116142133:A:G	rs204517	A	G	A	Hoxd9_MA0913.1	18	0	+	0	0	.
chr9	116156503	116156504	chr9:116156504:G:A	rs28729821	G	A	G	Hoxd9_MA0913.1	26	0	+	0	0	.
chr9	116491351	116491352	chr9:116491352:T:A	rs73657143	T	A	T	Hoxd9_MA0913.1	26	0	+	0	0	.
chr9	116543515	116543516	chr9:116543516:T:C	rs17220380	T	C	T	Hoxd9_MA0913.1	4	1	+	8.879672775420401	5.5875385236454225	GCCATAAAAA
chr9	116549188	116549189	chr9:116549189:T:C	rs62574405	T	C	T	Hoxd9_MA0913.1	12	0	+	0	0	.
chr9	116549189	116549190	chr9:116549190:C:G	rs532797958	C	G	C	Hoxd9_MA0913.1	13	0	+	0	0	.
chr9	116676631	116676632	chr9:116676632:A:C	rs1090026	A	C	A	Hoxd9_MA0913.1	7	1	+	8.879672775420401	5.585826023701971	GCCATAAAAA
chr9	117044918	117044919	chr9:117044919:G:A	rs10983474	G	A	G	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr9	117084204	117084205	chr9:117084205:T:C	rs1572157	T	C	C	Hoxd9_MA0913.1	16	0	-	0	0	.
chr9	117084218	117084219	chr9:117084219:T:C	rs1572158	T	C	T	Hoxd9_MA0913.1	2	1	-	7.7299109947576845	6.052452553299586	GCAGTAAAAT
chr9	117680205	117680206	chr9:117680206:C:G	rs10983747	C	G	C	Hoxd9_MA0913.1	15	0	-	0	0	.
chr9	117691562	117691563	chr9:117691563:C:T	rs4837497	C	T	C	Hoxd9_MA0913.1	10	0	+	0	0	.
chr9	117720661	117720662	chr9:117720662:T:C	rs7846989	T	C	T	Hoxd9_MA0913.1	-7	0	+	0	0	.
chr9	117740117	117740118	chr9:117740118:G:A	rs12337672	G	A	G	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr9	117859005	117859006	chr9:117859006:T:C	rs587418	T	C	T	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr9	118092158	118092159	chr9:118092159:G:A	rs16906696	G	A	A	Hoxd9_MA0913.1	21	0	+	0	0	.
chr9	118325724	118325725	chr9:118325725:T:A	rs7040056	T	A	A	Hoxd9_MA0913.1	-9	0	-	0	0	.
chr9	119126230	119126231	chr9:119126231:T:C	rs230138	T	C	C	Hoxd9_MA0913.1	-19	0	-	0	0	.
chr9	120016657	120016658	chr9:120016658:G:A	rs183541202	G	A	G	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr9	120186870	120186871	chr9:120186871:C:G	rs10739555	C	G	C	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr9	120630469	120630470	chr9:120630470:T:C	rs13291660	T	C	T	Hoxd9_MA0913.1	10	0	+	0	0	.
chr9	121069979	121069980	chr9:121069980:C:T	rs7466141	C	T	C	Hoxd9_MA0913.1	23	0	-	0	0	.
chr9	121652196	121652197	chr9:121652197:C:T	rs73661802	C	T	C	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr9	121750698	121750699	chr9:121750699:A:C	rs76667706	A	C	A	Hoxd9_MA0913.1	18	0	-	0	0	.
chr9	121972726	121972727	chr9:121972727:C:T	chr9:121972727:C:T	C	T	C	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr9	122051946	122051947	chr9:122051947:T:A	rs7849175	T	A	T	Hoxd9_MA0913.1	27	0	+	0	0	.
chr9	122063093	122063094	chr9:122063094:C:T	rs7029682	C	T	T	Hoxd9_MA0913.1	17	0	-	0	0	.
chr9	122394984	122394985	chr9:122394985:G:A	rs111369216	G	A	g	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr9	122420443	122420444	chr9:122420444:G:T	rs75508402	G	T	G	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr9	123043503	123043504	chr9:123043504:T:C	rs646545	T	C	T	Hoxd9_MA0913.1	24	0	+	0	0	.
chr9	123233927	123233928	chr9:123233928:C:T	rs10985910	C	T	T	Hoxd9_MA0913.1	29	0	+	0	0	.
chr9	123440095	123440096	chr9:123440096:C:T	rs78861713	C	T	G	Hoxd9_MA0913.1	25	0	-	0	0	.
chr9	123486862	123486863	chr9:123486863:G:A	rs117428293	G	A	G	Hoxd9_MA0913.1	24	0	+	0	0	.
chr9	123828679	123828680	chr9:123828680:C:G	rs656906	C	G	C	Hoxd9_MA0913.1	16	0	+	0	0	.
chr9	123945895	123945896	chr9:123945896:G:C	rs7042625	G	C	G	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr9	124004952	124004953	chr9:124004953:T:C	rs7046300	T	C	C	Hoxd9_MA0913.1	12	0	-	0	0	.
chr9	124007011	124007012	chr9:124007012:T:C	rs1887341	T	C	T	Hoxd9_MA0913.1	0	1	-	8.853608248980283	9.801341972390743	ACAATAAAAA
chr9	124184034	124184035	chr9:124184035:A:G	rs12001391	A	G	G	Hoxd9_MA0913.1	16	0	-	0	0	.
chr9	124259227	124259228	chr9:124259228:T:C	rs181031388	T	C	T	Hoxd9_MA0913.1	-15	0	-	0	0	.
chr9	124684605	124684606	chr9:124684606:T:C	rs16927583	T	C	C	Hoxd9_MA0913.1	-5	0	+	0	0	.
chr9	124965903	124965904	chr9:124965904:A:G	rs4838239	A	G	G	Hoxd9_MA0913.1	21	0	-	0	0	.
chr9	125053810	125053811	chr9:125053811:A:G	rs116966140	A	G	A	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr9	125091436	125091437	chr9:125091437:T:C	rs589748	T	C	C	Hoxd9_MA0913.1	-7	0	-	0	0	.
chr9	125103957	125103958	chr9:125103958:A:G	rs961751647	A	G	A	Hoxd9_MA0913.1	-1	0	-	0	0	.
chr9	125121180	125121181	chr9:125121181:G:A	rs7019288	G	A	G	Hoxd9_MA0913.1	19	0	+	0	0	.
chr9	125172070	125172071	chr9:125172071:A:C	rs2416954	A	C	A	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr9	125235023	125235024	chr9:125235024:G:A	rs12009	G	A	G	Hoxd9_MA0913.1	-2	0	-	0	0	.
chr9	125647116	125647117	chr9:125647117:G:A	rs10986827	G	A	G	Hoxd9_MA0913.1	26	0	+	0	0	.
chr9	125892217	125892218	chr9:125892218:T:C	rs75001292	T	C	C	Hoxd9_MA0913.1	24	0	-	0	0	.
chr9	126024529	126024530	chr9:126024530:G:A	rs34961104	G	A	G	Hoxd9_MA0913.1	26	0	-	0	0	.
chr9	126131599	126131600	chr9:126131600:C:T	rs12349159	C	T	C	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr9	126298937	126298938	chr9:126298938:A:G	rs1999201	A	G	A	Hoxd9_MA0913.1	14	0	+	0	0	.
chr9	126339226	126339227	chr9:126339227:T:C	rs112074580	T	C	T	Hoxd9_MA0913.1	13	0	-	0	0	.
chr9	126339238	126339239	chr9:126339239:G:A	rs7028698	G	A	G	Hoxd9_MA0913.1	1	1	-	8.838502353310592	8.490366725581566	GCCATTAAAA
chr9	126339252	126339253	chr9:126339253:T:C	rs4529551	T	C	T	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr9	126644364	126644365	chr9:126644365:T:C	rs7858338	T	C	T	Hoxd9_MA0913.1	3	1	-	7.3720090125411	5.544390072045995	GCCATTAAAG
chr9	126665401	126665402	chr9:126665402:C:T	rs182978922	C	T	C	Hoxd9_MA0913.1	27	0	-	0	0	.
chr9	126784272	126784273	chr9:126784273:G:A	rs112064771	G	A	G	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr9	126965732	126965733	chr9:126965733:T:A	rs10819257	T	A	T	Hoxd9_MA0913.1	8	1	-	8.853608248980283	7.375277646951231	ACAATAAAAA
chr9	127151326	127151327	chr9:127151327:A:G	rs13296793	A	G	A	Hoxd9_MA0913.1	-13	0	-	0	0	.
chr9	127388576	127388577	chr9:127388577:A:G	rs187955843	A	G	A	Hoxd9_MA0913.1	17	0	-	0	0	.
chr9	127495278	127495279	chr9:127495279:T:C	rs374296150	T	C	T	Hoxd9_MA0913.1	2	1	-	8.371167929409406	6.693709487951308	GTAATAAAAC
chr9	128072944	128072945	chr9:128072945:C:T	rs144622368	C	T	C	Hoxd9_MA0913.1	24	0	-	0	0	.
chr9	128087279	128087280	chr9:128087280:G:A	rs9774850	G	A	G	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr9	128140904	128140905	chr9:128140905:A:C	rs61125043	A	C	A	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr9	128558585	128558586	chr9:128558586:T:G	chr9:128558586:T:G	T	G	T	Hoxd9_MA0913.1	26	0	-	0	0	.
chr9	128558631	128558632	chr9:128558632:T:C	rs144171907	T	C	T	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr9	129261547	129261548	chr9:129261548:A:T	rs113321456	A	T	A	Hoxd9_MA0913.1	-8	0	+	0	0	.
chr9	129294038	129294039	chr9:129294039:C:T	rs10819490	C	T	T	Hoxd9_MA0913.1	-8	0	-	0	0	.
chr9	129429757	129429758	chr9:129429758:G:A	rs72764433	G	A	g	Hoxd9_MA0913.1	26	0	+	0	0	.
chr9	129433273	129433274	chr9:129433274:A:T	rs182805340	A	T	A	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr9	129488336	129488337	chr9:129488337:G:A	rs914650597	G	A	g	Hoxd9_MA0913.1	-4	0	+	0	0	.
chr9	129488341	129488342	chr9:129488342:T:G	chr9:129488342:T:G	T	G	T	Hoxd9_MA0913.1	1	1	+	9.412035922551908	6.667606537996219	GTAATTAAAA
chr9	129560378	129560379	chr9:129560379:G:A	rs12001580	G	A	A	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr9	129611197	129611198	chr9:129611198:A:T	rs187876960	A	T	A	Hoxd9_MA0913.1	10	0	+	0	0	.
chr9	129712549	129712550	chr9:129712550:C:T	rs2278623	C	T	C	Hoxd9_MA0913.1	20	0	-	0	0	.
chr9	129811256	129811257	chr9:129811257:G:T	rs12634	G	T	T	Hoxd9_MA0913.1	-1	0	+	0	0	.
chr9	129945266	129945267	chr9:129945267:T:C	rs60155447	T	C	T	Hoxd9_MA0913.1	-20	0	+	0	0	.
chr9	130329317	130329318	chr9:130329318:C:T	rs36135802	C	T	t	Hoxd9_MA0913.1	17	0	-	0	0	.
chr9	130588696	130588697	chr9:130588697:A:G	rs7466269	A	G	A	Hoxd9_MA0913.1	8	1	+	8.568625789732518	6.995657212274576	ACAATTAAAT
chr9	130922883	130922884	chr9:130922884:G:A	rs3847197	G	A	G	Hoxd9_MA0913.1	29	0	-	0	0	.
chr9	131244601	131244602	chr9:131244602:C:T	rs554445320	C	T	c	Hoxd9_MA0913.1	15	0	+	0	0	.
chr9	131458177	131458178	chr9:131458178:T:G	rs577763856	T	G	T	Hoxd9_MA0913.1	-10	0	-	0	0	.
chr9	131616927	131616928	chr9:131616928:G:C	rs2282007	G	C	G	Hoxd9_MA0913.1	18	0	-	0	0	.
chr9	131696830	131696831	chr9:131696831:C:T	rs2320273	C	T	.	Hoxd9_MA0913.1	23	0	+	0	0	.
chr9	131730346	131730347	chr9:131730347:T:C	rs62583109	T	C	T	Hoxd9_MA0913.1	29	0	+	0	0	.
chr9	132289083	132289084	chr9:132289084:G:A	rs75147566	G	A	G	Hoxd9_MA0913.1	19	0	+	0	0	.
chr9	132295480	132295481	chr9:132295481:G:T	rs11243718	G	T	G	Hoxd9_MA0913.1	-11	0	-	0	0	.
chr9	132689908	132689909	chr9:132689909:G:A	rs11788764	G	A	G	Hoxd9_MA0913.1	-6	0	+	0	0	.
chr9	132745215	132745216	chr9:132745216:C:T	rs28457683	C	T	C	Hoxd9_MA0913.1	22	0	+	0	0	.
chr9	132847940	132847941	chr9:132847941:G:A	rs117561717	G	A	G	Hoxd9_MA0913.1	-10	0	+	0	0	.
chr9	133272226	133272227	chr9:133272227:T:C	rs967002727	T	C	t	Hoxd9_MA0913.1	23	0	-	0	0	.
chr9	133328310	133328311	chr9:133328311:G:A	rs4962129	G	A	T	Hoxd9_MA0913.1	17	0	+	0	0	.
chr9	133930871	133930872	chr9:133930872:C:G	rs632626	C	G	C	Hoxd9_MA0913.1	29	0	-	0	0	.
chr9	134094315	134094316	chr9:134094316:C:T	rs2427966	C	T	C	Hoxd9_MA0913.1	22	0	+	0	0	.
chr9	134313949	134313950	chr9:134313950:A:G	rs1408628298	A	G	.	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr9	134503422	134503423	chr9:134503423:C:A	rs62571286	C	A	A	Hoxd9_MA0913.1	1	1	+	8.187202972822991	5.767384596797731	GCAATTAAGA
chr9	134584746	134584747	chr9:134584747:G:A	rs11103404	G	A	G	Hoxd9_MA0913.1	-9	0	+	0	0	.
chr9	134838996	134838997	chr9:134838997:G:C	rs7850184	G	C	C	Hoxd9_MA0913.1	14	0	-	0	0	.
chr9	134862709	134862710	chr9:134862710:T:C	rs113724659	T	C	T	Hoxd9_MA0913.1	25	0	-	0	0	.
chr9	134935729	134935730	chr9:134935730:C:G	rs4841945	C	G	C	Hoxd9_MA0913.1	-18	0	-	0	0	.
chr9	135010392	135010393	chr9:135010393:C:T	rs73664008	C	T	c	Hoxd9_MA0913.1	-16	0	-	0	0	.
chr9	135124155	135124156	chr9:135124156:C:T	rs17039706	C	T	C	Hoxd9_MA0913.1	-17	0	-	0	0	.
chr9	135128751	135128752	chr9:135128752:G:A	rs72760837	G	A	G	Hoxd9_MA0913.1	26	0	+	0	0	.
chr9	135519925	135519926	chr9:135519926:A:G	rs11103048	A	G	G	Hoxd9_MA0913.1	27	0	-	0	0	.
chr9	136080564	136080565	chr9:136080565:A:G	rs7041423	A	G	A	Hoxd9_MA0913.1	-19	0	+	0	0	.
chr9	136672668	136672669	chr9:136672669:T:C	rs45494498	T	C	T	Hoxd9_MA0913.1	10	0	+	0	0	.
chr9	137293772	137293773	chr9:137293773:A:G	rs7850758	A	G	A	Hoxd9_MA0913.1	-20	0	-	0	0	.
chr9	137398035	137398036	chr9:137398036:A:G	rs138100970	A	G	A	Hoxd9_MA0913.1	-17	0	+	0	0	.
chr9	137420572	137420573	chr9:137420573:G:A	rs28787940	G	A	G	Hoxd9_MA0913.1	-15	0	+	0	0	.
chr9	137711543	137711544	chr9:137711544:T:C	rs4631547	T	C	T	Hoxd9_MA0913.1	5	1	-	8.635860738282448	2.41419758538658	GCCATAAAAT