chr1	633671	633672	chr1:633672:C:T	rs2153588	C	T	.	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr1	633951	633952	chr1:633952:G:A	rs1439794969	G	A	.	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr1	898675	898676	chr1:898676:A:C	rs28482280	A	C	a	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr1	933690	933691	chr1:933691:G:A	rs115552829	G	A	g	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr1	1208187	1208188	chr1:1208188:G:A	rs150465089	G	A	g	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr1	1265403	1265404	chr1:1265404:C:T	rs141104787	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	+	7.522691831404475	5.628144526095533	CCCATAAAG
chr1	1265426	1265427	chr1:1265427:C:A	rs1258030646	C	A	C	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr1	1335258	1335259	chr1:1335259:G:A	rs1470126617	G	A	G	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr1	1532104	1532105	chr1:1532105:T:C	rs1987191	T	C	C	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr1	2067370	2067371	chr1:2067371:G:A	rs976944911	G	A	G	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr1	2274234	2274235	chr1:2274235:A:G	chr1:2274235:A:G	A	G	A	Hoxd9.mouse_homeodomain_1	4	1	-	8.287463081002919	5.632416436140341	CCAATAAAA
chr1	2305580	2305581	chr1:2305581:T:G	rs58351713	T	G	T	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr1	2546356	2546357	chr1:2546357:A:G	rs1031547154	A	G	.	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr1	2546391	2546392	chr1:2546392:G:A	rs150702405	G	A	.	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr1	2625751	2625752	chr1:2625752:C:T	rs7523364	C	T	C	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr1	2883197	2883198	chr1:2883198:G:T	rs729419	G	T	T	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr1	3038593	3038594	chr1:3038594:G:A	rs12036378	G	A	G	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr1	3167296	3167297	chr1:3167297:G:A	rs2742667	G	A	G	Hoxd9.mouse_homeodomain_1	3	1	+	7.075409217893736	8.409487817756228	CCCGTTAAA
chr1	3306715	3306716	chr1:3306716:C:T	rs4233025	C	T	T	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr1	3568038	3568039	chr1:3568039:G:A	rs72853588	G	A	G	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr1	3673406	3673407	chr1:3673407:C:A	rs56255778	C	A	C	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr1	3716972	3716973	chr1:3716973:G:A	rs3765764	G	A	A	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr1	3847203	3847204	chr1:3847204:G:A	rs77163906	G	A	G	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr1	3858211	3858212	chr1:3858212:G:A	rs186701451	G	A	G	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr1	3870459	3870460	chr1:3870460:G:A	rs115336625	G	A	G	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr1	3880080	3880081	chr1:3880081:C:G	rs6666303	C	G	G	Hoxd9.mouse_homeodomain_1	0	1	-	8.099252595576761	8.409487817756228	GCCATTAAA
chr1	4010334	4010335	chr1:4010335:G:A	rs34994381	G	A	G	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr1	4012247	4012248	chr1:4012248:C:T	rs4654458	C	T	C	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr1	4012268	4012269	chr1:4012269:T:C	rs7414301	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.212456609225008	5.878378009362515	GCCATAAAG
chr1	4227331	4227332	chr1:4227332:G:A	rs112629950	G	A	G	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr1	4231201	4231202	chr1:4231202:T:C	rs6426406	T	C	C	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr1	4307919	4307920	chr1:4307920:G:A	rs2934983	G	A	G	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr1	4348245	4348246	chr1:4348246:C:T	rs585160	C	T	C	Hoxd9.mouse_homeodomain_1	2	1	+	8.027213970992095	1.5397735133684596	CACATAAAA
chr1	4397783	4397784	chr1:4397784:T:C	rs10915523	T	C	C	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr1	4561263	4561264	chr1:4561264:G:A	rs113500797	G	A	G	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr1	4898410	4898411	chr1:4898411:T:G	rs2411952	T	G	G	Hoxd9.mouse_homeodomain_1	5	1	-	7.716978748812629	5.819671196252634	GACATAAAA
chr1	4910061	4910062	chr1:4910062:G:A	rs10915666	G	A	A	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr1	5238998	5238999	chr1:5238999:T:C	rs551536	T	C	T	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr1	5260147	5260148	chr1:5260148:G:C	rs644390	G	C	g	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr1	5267255	5267256	chr1:5267256:T:C	rs79689786	T	C	T	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr1	5267277	5267278	chr1:5267278:T:G	rs631837	T	G	T	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr1	5493835	5493836	chr1:5493836:A:G	rs10796405	A	G	G	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr1	5586141	5586142	chr1:5586142:G:A	rs12036552	G	A	G	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr1	5671015	5671016	chr1:5671016:G:A	rs112392820	G	A	G	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr1	5703099	5703100	chr1:5703100:G:A	rs770692	G	A	A	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr1	5878181	5878182	chr1:5878182:C:T	rs17432065	C	T	C	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr1	5971792	5971793	chr1:5971793:T:G	rs2047811	T	G	G	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr1	6083199	6083200	chr1:6083200:T:C	rs3789539	T	C	C	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr1	6185477	6185478	chr1:6185478:A:G	rs79757299	A	G	A	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr1	6288983	6288984	chr1:6288984:G:A	rs61760847	G	A	G	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr1	6368034	6368035	chr1:6368035:G:A	rs55702497	G	A	g	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr1	6451023	6451024	chr1:6451024:A:G	rs9434773	A	G	a	Hoxd9.mouse_homeodomain_1	3	1	+	7.212456609225008	5.878378009362515	GCCATAAAG
chr1	6451034	6451035	chr1:6451035:C:T	rs77170132	C	T	C	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr1	6646875	6646876	chr1:6646876:G:A	rs200453	G	A	G	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr1	6653164	6653165	chr1:6653165:A:G	rs41310355	A	G	A	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr1	6958658	6958659	chr1:6958659:A:G	rs11120797	A	G	A	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr1	7149863	7149864	chr1:7149864:T:C	rs74051162	T	C	C	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr1	7212959	7212960	chr1:7212960:T:C	rs12035586	T	C	T	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr1	7316878	7316879	chr1:7316879:C:T	rs12129818	C	T	C	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr1	7338774	7338775	chr1:7338775:A:G	rs72863583	A	G	A	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr1	7451117	7451118	chr1:7451118:G:C	rs61772211	G	C	G	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr1	7502427	7502428	chr1:7502428:C:T	rs1725262	C	T	C	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr1	7537177	7537178	chr1:7537178:C:T	rs12089447	C	T	C	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr1	7537215	7537216	chr1:7537216:G:A	rs561116376	G	A	G	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr1	7845947	7845948	chr1:7845948:G:T	rs707472	G	T	G	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr1	8015559	8015560	chr1:8015560:T:C	rs12087168	T	C	T	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr1	8132034	8132035	chr1:8132035:T:G	rs11121105	T	G	T	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr1	8292337	8292338	chr1:8292338:T:C	rs299689	T	C	C	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr1	8292343	8292344	chr1:8292344:G:A	rs299690	G	A	A	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr1	8342601	8342602	chr1:8342602:G:A	rs116338501	G	A	G	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr1	8408217	8408218	chr1:8408218:A:G	rs301792	A	G	G	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr1	8415795	8415796	chr1:8415796:T:C	rs116863460	T	C	T	Hoxd9.mouse_homeodomain_1	8	1	-	8.409487817756228	6.943160709270972	CCCATTAAA
chr1	8464132	8464133	chr1:8464133:A:C	rs301785	A	C	c	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr1	8871089	8871090	chr1:8871090:C:T	rs2274971	C	T	C	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr1	8873620	8873621	chr1:8873621:C:T	chr1:8873621:C:T	C	T	C	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr1	8880674	8880675	chr1:8880675:G:A	rs148144498	G	A	G	Hoxd9.mouse_homeodomain_1	0	1	-	8.287463081002919	6.392915775693977	CCAATAAAA
chr1	9009871	9009872	chr1:9009872:T:C	rs72632905	T	C	T	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr1	9010870	9010871	chr1:9010871:A:C	rs12116944	A	C	A	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr1	9218211	9218212	chr1:9218212:G:T	rs75921077	G	T	G	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr1	9316469	9316470	chr1:9316470:A:T	rs12734790	A	T	A	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr1	9421775	9421776	chr1:9421776:T:C	rs4130512	T	C	C	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr1	9732373	9732374	chr1:9732374:T:G	rs76908323	T	G	T	Hoxd9.mouse_homeodomain_1	6	1	-	7.9772278588234515	6.230144043982641	GCAATAAAA
chr1	9822791	9822792	chr1:9822792:C:T	rs185159844	C	T	C	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr1	10083491	10083492	chr1:10083492:T:A	rs79980202	T	A	T	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr1	10170447	10170448	chr1:10170448:T:G	rs17034563	T	G	T	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr1	10340071	10340072	chr1:10340072:C:T	rs17034781	C	T	C	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr1	10340072	10340073	chr1:10340073:G:A	rs114540197	G	A	G	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr1	10678789	10678790	chr1:10678790:A:T	rs114784407	A	T	A	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr1	10686702	10686703	chr1:10686703:G:A	rs143997131	G	A	G	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr1	10729639	10729640	chr1:10729640:T:C	rs284279	T	C	T	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr1	10848495	10848496	chr1:10848496:C:T	rs79016352	C	T	C	Hoxd9.mouse_homeodomain_1	1	1	+	8.287463081002919	6.972661166669912	CCAATAAAA
chr1	10932294	10932295	chr1:10932295:T:A	rs78596169	T	A	T	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr1	10942430	10942431	chr1:10942431:C:T	rs6656310	C	T	T	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr1	11064057	11064058	chr1:11064058:G:A	rs76102632	G	A	G	Hoxd9.mouse_homeodomain_1	2	1	-	7.075409217893736	0.5879687602700975	CCCGTTAAA
chr1	11105524	11105525	chr1:11105525:T:C	rs1477089863	T	C	T	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr1	11457372	11457373	chr1:11457373:G:A	rs11589539	G	A	G	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr1	11506126	11506127	chr1:11506127:T:C	rs6702624	T	C	T	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr1	11567664	11567665	chr1:11567665:T:G	rs72866465	T	G	T	Hoxd9.mouse_homeodomain_1	5	1	-	8.287463081002919	6.390155528442924	CCAATAAAA
chr1	11785111	11785112	chr1:11785112:T:G	rs11586659	T	G	G	Hoxd9.mouse_homeodomain_1	5	1	-	7.212456609225008	5.315149056665012	GCCATAAAG
chr1	11788010	11788011	chr1:11788011:G:C	rs1537514	G	C	G	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr1	11868837	11868838	chr1:11868838:G:A	rs11803049	G	A	A	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr1	11887571	11887572	chr1:11887572:T:C	rs1474576	T	C	C	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr1	11988537	11988538	chr1:11988538:C:T	rs56243319	C	T	C	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr1	12045274	12045275	chr1:12045275:T:G	rs12759042	T	G	T	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr1	12099890	12099891	chr1:12099891:G:A	rs6681374	G	A	G	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr1	12316721	12316722	chr1:12316722:T:G	rs17037979	T	G	G	Hoxd9.mouse_homeodomain_1	3	1	-	7.716978748812629	1.1414706446091483	GACATAAAA
chr1	12342781	12342782	chr1:12342782:A:T	rs139791517	A	T	A	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr1	12342807	12342808	chr1:12342808:G:T	chr1:12342808:G:T	G	T	G	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr1	12475309	12475310	chr1:12475310:A:G	rs78108062	A	G	A	Hoxd9.mouse_homeodomain_1	8	1	+	7.241935125048919	5.775608016563663	CCCATACAA
chr1	12539916	12539917	chr1:12539917:C:A	rs80341536	C	A	C	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr1	13229411	13229412	chr1:13229412:C:T	rs1439095328	C	T	c	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr1	13243851	13243852	chr1:13243852:C:T	rs9700851	C	T	C	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr1	13516185	13516186	chr1:13516186:A:G	rs382780	A	G	A	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr1	13630909	13630910	chr1:13630910:C:T	rs12143609	C	T	C	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr1	13804132	13804133	chr1:13804133:A:G	rs2281164	A	G	A	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr1	13873172	13873173	chr1:13873173:T:G	rs12408355	T	G	.	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr1	13929482	13929483	chr1:13929483:T:G	rs7538374	T	G	C	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr1	14037206	14037207	chr1:14037207:A:G	rs142450209	A	G	A	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr1	14110465	14110466	chr1:14110466:T:C	rs11577608	T	C	C	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr1	14110466	14110467	chr1:14110467:G:A	rs11590023	G	A	G	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr1	14127283	14127284	chr1:14127284:G:A	rs10928025	G	A	A	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr1	14142296	14142297	chr1:14142297:A:G	rs10803462	A	G	G	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr1	14320600	14320601	chr1:14320601:G:A	rs967892137	G	A	G	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr1	14320603	14320604	chr1:14320604:G:T	rs16853928	G	T	T	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr1	14441690	14441691	chr1:14441691:A:G	rs146869707	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	7.522691831404475	6.188613231541982	CCCATAAAG
chr1	14619653	14619654	chr1:14619654:C:T	rs12725163	C	T	C	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr1	14628565	14628566	chr1:14628566:T:C	rs16850617	T	C	T	Hoxd9.mouse_homeodomain_1	8	1	-	8.027213970992095	6.560886862506841	CACATAAAA
chr1	14889992	14889993	chr1:14889993:A:G	rs12029721	A	G	A	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr1	15003803	15003804	chr1:15003804:C:T	rs10803338	C	T	T	Hoxd9.mouse_homeodomain_1	2	1	+	7.34470511784777	0.8572646602241328	GCCGTAAAA
chr1	15107141	15107142	chr1:15107142:A:C	rs545416	A	C	A	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr1	15107143	15107144	chr1:15107144:T:G	rs545415	T	G	T	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr1	15107159	15107160	chr1:15107160:A:G	rs6429710	A	G	G	Hoxd9.mouse_homeodomain_1	3	1	+	8.678783717710262	7.34470511784777	GCCATAAAA
chr1	15130927	15130928	chr1:15130928:G:T	rs72640753	G	T	G	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr1	15135859	15135860	chr1:15135860:C:G	rs2143580	C	G	c	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr1	15225643	15225644	chr1:15225644:T:C	rs6673100	T	C	T	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr1	15282380	15282381	chr1:15282381:G:T	rs575530	G	T	T	Hoxd9.mouse_homeodomain_1	2	1	-	7.212456609225008	6.510900750338196	GCCATAAAG
chr1	15308299	15308300	chr1:15308300:A:G	rs7550951	A	G	G	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr1	15517740	15517741	chr1:15517741:G:T	rs1862711	G	T	T	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr1	15749929	15749930	chr1:15749930:C:T	rs115835356	C	T	C	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr1	15749968	15749969	chr1:15749969:C:T	rs528517299	C	T	C	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr1	15758683	15758684	chr1:15758684:T:C	rs907055579	T	C	T	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr1	15758721	15758722	chr1:15758722:G:A	rs895755766	G	A	G	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr1	15863473	15863474	chr1:15863474:A:G	rs67210023	A	G	A	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr1	16114744	16114745	chr1:16114745:C:A	rs111970902	C	A	C	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr1	16328759	16328760	chr1:16328760:C:A	rs76347269	C	A	C	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr1	16513994	16513995	chr1:16513995:T:C	rs116334784	T	C	.	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr1	16514010	16514011	chr1:16514011:C:G	rs1236639390	C	G	.	Hoxd9.mouse_homeodomain_1	2	1	+	7.45645131454733	3.988459657095	CCCATAAAC
chr1	16514017	16514018	chr1:16514018:C:T	rs564546676	C	T	.	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr1	16626916	16626917	chr1:16626917:C:G	rs2005328	C	G	.	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr1	16626928	16626929	chr1:16626929:G:A	rs3738598	G	A	.	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr1	16891142	16891143	chr1:16891143:G:T	rs12027064	G	T	.	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr1	17004940	17004941	chr1:17004941:G:C	rs41273155	G	C	G	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr1	17134228	17134229	chr1:17134229:A:G	rs2311191	A	G	G	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr1	17136169	17136170	chr1:17136170:G:A	rs2311190	G	A	T	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr1	17136185	17136186	chr1:17136186:C:A	rs2311189	C	A	C	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr1	17183134	17183135	chr1:17183135:G:A	rs2935927	G	A	A	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr1	17185276	17185277	chr1:17185277:C:T	rs3003461	C	T	C	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr1	17185289	17185290	chr1:17185290:C:T	rs3003462	C	T	C	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr1	17196871	17196872	chr1:17196872:G:A	rs115033991	G	A	G	Hoxd9.mouse_homeodomain_1	8	1	-	7.1462160923678635	5.746270592944195	GCCATAAAC
chr1	17233255	17233256	chr1:17233256:A:C	rs74058992	A	C	a	Hoxd9.mouse_homeodomain_1	7	1	+	8.98901893988973	6.099603169859144	CCCATAAAA
chr1	17348041	17348042	chr1:17348042:C:A	rs2240335	C	A	C	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr1	17586820	17586821	chr1:17586821:G:A	rs140247347	G	A	G	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr1	17631121	17631122	chr1:17631122:C:A	chr1:17631122:C:A	C	A	C	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr1	17795588	17795589	chr1:17795589:A:G	rs6695001	A	G	G	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr1	18028735	18028736	chr1:18028736:G:A	rs77099480	G	A	G	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr1	18028917	18028918	chr1:18028918:T:C	rs6669252	T	C	T	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr1	18050412	18050413	chr1:18050413:C:T	rs4920417	C	T	C	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr1	18339724	18339725	chr1:18339725:A:G	rs6603894	A	G	A	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr1	18435101	18435102	chr1:18435102:C:G	rs144595620	C	G	C	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr1	18934857	18934858	chr1:18934858:G:C	rs79820690	G	C	g	Hoxd9.mouse_homeodomain_1	1	1	-	7.091711387329735	0.6821781585473693	CCCATCAAA
chr1	19186406	19186407	chr1:19186407:C:T	rs111572921	C	T	C	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr1	19331329	19331330	chr1:19331330:G:A	rs9729832	G	A	G	Hoxd9.mouse_homeodomain_1	1	1	-	8.678783717710262	7.363981803377255	GCCATAAAA
chr1	19361567	19361568	chr1:19361568:A:G	rs55852318	A	G	A	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr1	19463375	19463376	chr1:19463376:C:T	rs756301603	C	T	C	Hoxd9.mouse_homeodomain_1	1	1	+	8.678783717710262	7.363981803377255	GCCATAAAA
chr1	19467692	19467693	chr1:19467693:C:A	rs1542875	C	A	C	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr1	19513500	19513501	chr1:19513501:G:A	rs12566679	G	A	G	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr1	19875859	19875860	chr1:19875860:T:C	rs12403770	T	C	T	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr1	20248835	20248836	chr1:20248836:T:G	rs12411093	T	G	G	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr1	20340511	20340512	chr1:20340512:G:A	rs11580208	G	A	A	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr1	20371229	20371230	chr1:20371230:C:A	rs12141992	C	A	A	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr1	20508434	20508435	chr1:20508435:C:G	rs145588626	C	G	C	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr1	20577491	20577492	chr1:20577492:C:A	rs10799646	C	A	C	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr1	20632901	20632902	chr1:20632902:G:A	rs138967104	G	A	G	Hoxd9.mouse_homeodomain_1	0	1	+	8.099252595576761	7.3103675617196195	GCCATTAAA
chr1	20632927	20632928	chr1:20632928:G:A	rs10916840	G	A	G	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr1	20982137	20982138	chr1:20982138:G:C	rs72652993	G	C	G	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr1	21250709	21250710	chr1:21250710:G:A	rs212518	G	A	G	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr1	21451142	21451143	chr1:21451143:C:T	rs115529941	C	T	.	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr1	21901745	21901746	chr1:21901746:G:C	rs12752439	G	C	G	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr1	21956678	21956679	chr1:21956679:C:T	rs6662815	C	T	C	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr1	21996559	21996560	chr1:21996560:G:C	rs10799729	G	C	.	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr1	22011105	22011106	chr1:22011106:G:A	rs201646758	G	A	-	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr1	22113116	22113117	chr1:22113117:C:T	rs115805722	C	T	C	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr1	22250796	22250797	chr1:22250797:C:T	rs12239548	C	T	C	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr1	22294926	22294927	chr1:22294927:T:C	rs115905527	T	C	T	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr1	22294927	22294928	chr1:22294928:G:A	rs116302964	G	A	G	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr1	22379311	22379312	chr1:22379312:A:T	rs12730673	A	T	A	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr1	22419002	22419003	chr1:22419003:C:G	rs145013226	C	G	C	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr1	22689663	22689664	chr1:22689664:C:T	rs16827450	C	T	C	Hoxd9.mouse_homeodomain_1	1	1	+	7.1462160923678635	5.831414178034855	GCCATAAAC
chr1	23169001	23169002	chr1:23169002:A:G	rs79130087	A	G	A	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr1	23381198	23381199	chr1:23381199:A:G	rs650102	A	G	G	Hoxd9.mouse_homeodomain_1	7	1	+	7.1462160923678635	0.44239014577613167	GCCATAAAC
chr1	23475471	23475472	chr1:23475472:A:T	rs968280	A	T	A	Hoxd9.mouse_homeodomain_1	5	1	+	8.678783717710262	8.099252595576761	GCCATAAAA
chr1	23851591	23851592	chr1:23851592:G:C	rs1347801375	G	C	G	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr1	23984557	23984558	chr1:23984558:T:C	rs4649148	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.287463081002919	6.953384481140425	CCAATAAAA
chr1	24050835	24050836	chr1:24050836:T:C	rs11586125	T	C	C	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr1	24092811	24092812	chr1:24092812:A:G	rs4075565	A	G	A	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr1	24160169	24160170	chr1:24160170:G:A	rs1416834	G	A	G	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr1	24201866	24201867	chr1:24201867:A:G	rs546622753	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.287463081002919	6.953384481140425	CCAATAAAA
chr1	24318551	24318552	chr1:24318552:C:T	rs11587752	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	+	8.287463081002919	6.392915775693977	CCAATAAAA
chr1	24534980	24534981	chr1:24534981:G:A	rs11799673	G	A	A	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr1	24867365	24867366	chr1:24867366:A:G	rs116581099	A	G	A	Hoxd9.mouse_homeodomain_1	4	1	-	7.45645131454733	4.801404669684752	CCCATAAAC
chr1	24929358	24929359	chr1:24929359:C:G	rs79784290	C	G	C	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr1	24955047	24955048	chr1:24955048:A:G	rs75123226	A	G	A	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr1	24963120	24963121	chr1:24963121:T:C	rs11249210	T	C	C	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr1	25063835	25063836	chr1:25063836:G:A	rs77569452	G	A	g	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr1	25066662	25066663	chr1:25066663:G:A	rs138689220	G	A	G	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr1	25132940	25132941	chr1:25132941:T:C	rs2753320	T	C	T	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr1	25159807	25159808	chr1:25159808:A:G	rs926462	A	G	A	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr1	25162249	25162250	chr1:25162250:A:G	rs9438893	A	G	G	Hoxd9.mouse_homeodomain_1	2	1	+	8.287463081002919	5.5210272824374	CCAATAAAA
chr1	25173812	25173813	chr1:25173813:G:A	rs6687076	G	A	G	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr1	25530718	25530719	chr1:25530719:A:G	rs75065172	A	G	A	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr1	25641282	25641283	chr1:25641283:A:G	rs3767909	A	G	a	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr1	25666790	25666791	chr1:25666791:G:A	rs190714513	G	A	G	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr1	25688320	25688321	chr1:25688321:A:G	rs116669528	A	G	A	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr1	25841351	25841352	chr1:25841352:A:G	rs213632	A	G	G	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr1	26011166	26011167	chr1:26011167:A:G	rs35610657	A	G	a	Hoxd9.mouse_homeodomain_1	3	1	+	7.9772278588234515	6.643149258960959	GCAATAAAA
chr1	26287465	26287466	chr1:26287466:C:G	rs114291908	C	G	C	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr1	26351512	26351513	chr1:26351513:G:A	rs57516379	G	A	A	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr1	26351545	26351546	chr1:26351546:G:A	rs74444587	G	A	G	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr1	26419707	26419708	chr1:26419708:A:G	rs4274112	A	G	A	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr1	26427450	26427451	chr1:26427451:T:C	rs3811463	T	C	T	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr1	26868018	26868019	chr1:26868019:G:A	rs78487933	G	A	G	Hoxd9.mouse_homeodomain_1	1	1	-	6.943160709270972	5.628358794937966	CCCATTAAG
chr1	26899597	26899598	chr1:26899598:G:A	rs34339345	G	A	G	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr1	26945803	26945804	chr1:26945804:A:G	rs74062546	A	G	A	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr1	27866020	27866021	chr1:27866021:A:T	rs7514900	A	T	T	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr1	27970548	27970549	chr1:27970549:C:G	rs115724379	C	G	C	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr1	28382603	28382604	chr1:28382604:A:G	rs10794517	A	G	G	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr1	28747713	28747714	chr1:28747714:A:G	chr1:28747714:A:G	A	G	A	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr1	28984004	28984005	chr1:28984005:G:A	rs148683159	G	A	G	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr1	29278236	29278237	chr1:29278237:C:T	rs34330061	C	T	C	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr1	29310463	29310464	chr1:29310464:G:A	rs12735793	G	A	G	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr1	29344575	29344576	chr1:29344576:C:G	rs212316	C	G	C	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr1	29545667	29545668	chr1:29545668:C:T	rs61763933	C	T	C	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr1	29639010	29639011	chr1:29639011:C:T	rs9442466	C	T	C	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr1	29689213	29689214	chr1:29689214:C:T	rs114697087	C	T	.	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr1	29689220	29689221	chr1:29689221:G:A	rs74067633	G	A	.	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr1	29712200	29712201	chr1:29712201:G:T	rs79139442	G	T	G	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr1	29712205	29712206	chr1:29712206:A:T	rs6677829	A	T	A	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr1	29712240	29712241	chr1:29712241:T:C	rs894216	T	C	T	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr1	29715760	29715761	chr1:29715761:T:C	rs6673417	T	C	T	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr1	29751824	29751825	chr1:29751825:A:G	rs7417354	A	G	.	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr1	29786196	29786197	chr1:29786197:A:G	rs16832905	A	G	N	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr1	29789035	29789036	chr1:29789036:T:C	rs4949453	T	C	N	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr1	29839890	29839891	chr1:29839891:G:A	rs12139699	G	A	G	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr1	29852374	29852375	chr1:29852375:C:T	rs12062432	C	T	c	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr1	29856852	29856853	chr1:29856853:T:C	rs4949503	T	C	T	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr1	30028614	30028615	chr1:30028615:T:G	rs10914832	T	G	T	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr1	30062266	30062267	chr1:30062267:G:A	rs869357	G	A	g	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr1	30183190	30183191	chr1:30183191:C:G	rs7522529	C	G	C	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr1	30183199	30183200	chr1:30183200:C:G	rs7522533	C	G	C	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr1	30420371	30420372	chr1:30420372:C:G	chr1:30420372:C:G	C	G	C	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr1	30693940	30693941	chr1:30693941:G:A	rs12089275	G	A	A	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr1	30717632	30717633	chr1:30717633:G:T	rs1188407	G	T	G	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr1	30717932	30717933	chr1:30717933:G:A	rs557414976	G	A	G	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr1	30809243	30809244	chr1:30809244:A:G	rs183584920	A	G	A	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr1	30984858	30984859	chr1:30984859:T:C	rs186500599	T	C	T	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr1	31125528	31125529	chr1:31125529:G:A	chr1:31125529:G:A	G	A	G	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr1	31154440	31154441	chr1:31154441:G:T	rs535952903	G	T	G	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr1	31199318	31199319	chr1:31199319:G:C	rs7545480	G	C	G	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr1	31199343	31199344	chr1:31199344:G:A	rs7545488	G	A	G	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr1	31299723	31299724	chr1:31299724:A:G	rs4622114	A	G	A	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr1	31362499	31362500	chr1:31362500:T:C	rs61780112	T	C	T	Hoxd9.mouse_homeodomain_1	7	1	-	7.241935125048919	0.5381091784571871	CCCATACAA
chr1	31374571	31374572	chr1:31374572:G:T	rs12401792	G	T	G	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr1	31390815	31390816	chr1:31390816:G:A	rs7534465	G	A	G	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr1	31400676	31400677	chr1:31400677:T:C	rs76070249	T	C	T	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr1	31400677	31400678	chr1:31400678:C:A	rs1566960	C	A	C	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr1	31432325	31432326	chr1:31432326:A:T	rs12751487	A	T	A	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr1	31443906	31443907	chr1:31443907:T:C	rs13376569	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.287463081002919	6.953384481140425	CCAATAAAA
chr1	31497744	31497745	chr1:31497745:C:T	rs76081426	C	T	T	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr1	31532682	31532683	chr1:31532683:A:G	rs7536399	A	G	A	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr1	31649191	31649192	chr1:31649192:G:A	rs4949455	G	A	A	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr1	31751027	31751028	chr1:31751028:C:T	rs76917025	C	T	C	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr1	31905921	31905922	chr1:31905922:C:A	rs682654	C	A	A	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr1	31930401	31930402	chr1:31930402:C:T	rs12739816	C	T	C	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr1	31950275	31950276	chr1:31950276:C:T	rs190996960	C	T	C	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr1	32073492	32073493	chr1:32073493:G:A	rs1339047895	G	A	G	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr1	33004639	33004640	chr1:33004640:G:A	rs61800915	G	A	G	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr1	33285473	33285474	chr1:33285474:A:G	rs12736971	A	G	A	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr1	33285501	33285502	chr1:33285502:T:A	rs7526544	T	A	A	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr1	33363372	33363373	chr1:33363373:C:T	rs76659845	C	T	C	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr1	33393099	33393100	chr1:33393100:G:A	rs4294379	G	A	G	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr1	33419301	33419302	chr1:33419302:T:C	rs60166288	T	C	T	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr1	33508405	33508406	chr1:33508406:A:G	rs12094108	A	G	A	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr1	33559104	33559105	chr1:33559105:C:A	rs139206932	C	A	C	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr1	33789365	33789366	chr1:33789366:A:G	rs1925338	A	G	A	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr1	33820114	33820115	chr1:33820115:G:A	rs10914784	G	A	G	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr1	33896229	33896230	chr1:33896230:G:A	rs10799005	G	A	G	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr1	33902945	33902946	chr1:33902946:G:A	rs989896184	G	A	G	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr1	34069333	34069334	chr1:34069334:T:C	rs112398305	T	C	C	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr1	34187444	34187445	chr1:34187445:C:A	rs6677382	C	A	C	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr1	34283152	34283153	chr1:34283153:C:A	rs9661105	C	A	A	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr1	34294974	34294975	chr1:34294975:G:C	rs2091188	G	C	G	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr1	34338897	34338898	chr1:34338898:G:A	rs1342160	G	A	A	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr1	34365046	34365047	chr1:34365047:C:G	rs77294657	C	G	G	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr1	34652538	34652539	chr1:34652539:C:A	rs6425908	C	A	C	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr1	34711003	34711004	chr1:34711004:G:T	rs539009868	G	T	G	Hoxd9.mouse_homeodomain_1	0	1	-	8.409487817756228	7.3103675617196195	CCCATTAAA
chr1	34716987	34716988	chr1:34716988:A:G	rs1741959	A	G	G	Hoxd9.mouse_homeodomain_1	3	1	+	8.027213970992095	6.693135371129603	CACATAAAA
chr1	34753402	34753403	chr1:34753403:T:C	rs115291690	T	C	T	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr1	34763657	34763658	chr1:34763658:C:G	rs7549597	C	G	C	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr1	34836259	34836260	chr1:34836260:T:C	rs6689367	T	C	C	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr1	35445246	35445247	chr1:35445247:C:T	rs950848	C	T	T	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr1	35947727	35947728	chr1:35947728:T:C	rs67641270	T	C	C	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr1	36023624	36023625	chr1:36023625:C:T	rs116305778	C	T	C	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr1	36108587	36108588	chr1:36108588:C:A	rs115197883	C	A	c	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr1	36225268	36225269	chr1:36225269:C:A	rs272814	C	A	A	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr1	36398219	36398220	chr1:36398220:G:A	rs61489192	G	A	G	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr1	36398255	36398256	chr1:36398256:C:T	rs114210032	C	T	c	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr1	36415743	36415744	chr1:36415744:C:A	rs111453802	C	A	c	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr1	36763490	36763491	chr1:36763491:G:A	rs2135595	G	A	G	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr1	36919081	36919082	chr1:36919082:T:C	rs10796894	T	C	C	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr1	37267531	37267532	chr1:37267532:G:C	rs58834456	G	C	G	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr1	37401041	37401042	chr1:37401042:T:C	rs2745480	T	C	T	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr1	37678595	37678596	chr1:37678596:G:T	rs10908368	G	T	G	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr1	37860045	37860046	chr1:37860046:A:C	chr1:37860046:A:C	A	C	A	Hoxd9.mouse_homeodomain_1	7	1	+	7.091711387329735	4.202295617299148	CCCATCAAA
chr1	38191538	38191539	chr1:38191539:A:C	chr1:38191539:A:C	A	C	A	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr1	38300625	38300626	chr1:38300626:C:T	rs1329969	C	T	T	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr1	38302629	38302630	chr1:38302630:A:G	rs7553643	A	G	A	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr1	38459724	38459725	chr1:38459725:G:T	rs2248698	G	T	g	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr1	38475058	38475059	chr1:38475059:C:G	rs1269469491	C	G	C	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr1	38738511	38738512	chr1:38738512:A:G	rs679143	A	G	G	Hoxd9.mouse_homeodomain_1	7	1	+	8.027213970992095	1.3233880244003648	CACATAAAA
chr1	38786731	38786732	chr1:38786732:T:C	rs1005766534	T	C	T	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr1	39192845	39192846	chr1:39192846:G:A	rs118061041	G	A	G	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr1	39566566	39566567	chr1:39566567:T:C	rs3768320	T	C	T	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr1	39739455	39739456	chr1:39739456:A:G	chr1:39739456:A:G	A	G	A	Hoxd9.mouse_homeodomain_1	5	1	+	7.212456609225008	0.8382668909784519	GCCATAAAG
chr1	39998048	39998049	chr1:39998049:T:G	rs9659926	T	G	-	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr1	40351131	40351132	chr1:40351132:A:G	rs209591	A	G	g	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr1	40601581	40601582	chr1:40601582:G:A	rs9439028	G	A	A	Hoxd9.mouse_homeodomain_1	2	1	-	7.212456609225008	0.7250161516013711	GCCATAAAG
chr1	40601595	40601596	chr1:40601596:A:G	rs9438943	A	G	G	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr1	40641939	40641940	chr1:40641940:C:G	rs2076332	C	G	C	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr1	40854884	40854885	chr1:40854885:T:G	chr1:40854885:T:G	T	G	T	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr1	40854892	40854893	chr1:40854893:A:G	chr1:40854893:A:G	A	G	A	Hoxd9.mouse_homeodomain_1	6	1	+	8.678783717710262	1.9749577711185315	GCCATAAAA
chr1	40854895	40854896	chr1:40854896:C:T	rs56025967	C	T	C	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr1	41439560	41439561	chr1:41439561:G:A	rs12126237	G	A	G	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr1	41439600	41439601	chr1:41439601:C:T	rs4451540	C	T	C	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr1	41501853	41501854	chr1:41501854:G:A	rs920061886	G	A	G	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr1	42314968	42314969	chr1:42314969:C:T	rs2479463	C	T	T	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr1	42773723	42773724	chr1:42773724:G:A	rs2760075	G	A	A	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr1	43053158	43053159	chr1:43053159:C:T	rs35046440	C	T	C	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr1	43088444	43088445	chr1:43088445:C:T	rs1098622	C	T	c	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr1	43147247	43147248	chr1:43147248:T:C	rs12030306	T	C	T	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr1	43171302	43171303	chr1:43171303:C:T	rs1010620	C	T	C	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr1	43173673	43173674	chr1:43173674:A:C	rs74883042	A	C	A	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr1	43419186	43419187	chr1:43419187:G:A	rs77413552	G	A	G	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr1	43712398	43712399	chr1:43712399:T:G	rs304303	T	G	G	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr1	43959206	43959207	chr1:43959207:T:G	rs4660758	T	G	G	Hoxd9.mouse_homeodomain_1	7	1	-	8.98901893988973	6.099603169859144	CCCATAAAA
chr1	44267774	44267775	chr1:44267775:T:C	rs142623730	T	C	T	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr1	44274313	44274314	chr1:44274314:A:G	rs35554553	A	G	A	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr1	44506105	44506106	chr1:44506106:T:C	rs12740646	T	C	T	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr1	44572073	44572074	chr1:44572074:A:C	rs115665405	A	C	A	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr1	44802359	44802360	chr1:44802360:A:C	rs17883304	A	C	A	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr1	44924776	44924777	chr1:44924777:T:C	rs143035453	T	C	T	Hoxd9.mouse_homeodomain_1	6	1	-	7.889898683853121	1.18607273726139	ACCATAAAA
chr1	45403361	45403362	chr1:45403362:G:C	rs75033831	G	C	G	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr1	45444272	45444273	chr1:45444273:T:A	rs1006215	T	A	A	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr1	45470612	45470613	chr1:45470613:C:T	rs1765711	C	T	C	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr1	45687338	45687339	chr1:45687339:G:A	rs551549007	G	A	G	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr1	45922156	45922157	chr1:45922157:G:C	rs7519181	G	C	G	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr1	45922184	45922185	chr1:45922185:A:G	rs11580953	A	G	A	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr1	45931031	45931032	chr1:45931032:G:A	rs10789482	G	A	a	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr1	45975687	45975688	chr1:45975688:A:C	rs9919275	A	C	A	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr1	46339993	46339994	chr1:46339994:G:C	rs72885152	G	C	g	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr1	46340010	46340011	chr1:46340011:G:T	rs567240338	G	T	g	Hoxd9.mouse_homeodomain_1	1	1	-	7.889898683853121	6.928093714955487	ACCATAAAA
chr1	46450846	46450847	chr1:46450847:G:A	rs942257	G	A	A	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr1	46600710	46600711	chr1:46600711:T:C	rs11211319	T	C	T	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr1	46605503	46605504	chr1:46605504:G:C	rs3753359	G	C	G	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr1	47107740	47107741	chr1:47107741:A:C	rs11211451	A	C	A	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr1	47184405	47184406	chr1:47184406:A:G	rs202210614	A	G	A	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr1	47503018	47503019	chr1:47503019:A:G	rs116042592	A	G	A	Hoxd9.mouse_homeodomain_1	8	1	+	8.678783717710262	7.212456609225008	GCCATAAAA
chr1	48093301	48093302	chr1:48093302:G:T	rs75007094	G	T	G	Hoxd9.mouse_homeodomain_1	2	1	-	8.98901893988973	8.287463081002919	CCCATAAAA
chr1	48252135	48252136	chr1:48252136:T:G	rs212970	T	G	G	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr1	48291269	48291270	chr1:48291270:G:T	rs1027118522	G	T	G	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr1	48872827	48872828	chr1:48872828:C:T	rs4565762	C	T	T	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr1	49798100	49798101	chr1:49798101:C:T	rs4926542	C	T	T	Hoxd9.mouse_homeodomain_1	0	1	+	8.287463081002919	6.392915775693977	CCAATAAAA
chr1	50311167	50311168	chr1:50311168:T:G	rs3009110	T	G	G	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr1	51321571	51321572	chr1:51321572:C:T	rs113744597	C	T	C	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr1	51376295	51376296	chr1:51376296:T:C	rs77210715	T	C	T	Hoxd9.mouse_homeodomain_1	7	1	-	7.1462160923678635	0.44239014577613167	GCCATAAAC
chr1	51512692	51512693	chr1:51512693:A:G	rs74082612	A	G	A	Hoxd9.mouse_homeodomain_1	5	1	+	7.522691831404475	1.1485021131579192	CCCATAAAG
chr1	51518402	51518403	chr1:51518403:G:C	rs541536581	G	C	G	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr1	51728879	51728880	chr1:51728880:T:C	rs145187644	T	C	T	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr1	51729346	51729347	chr1:51729347:C:T	rs72663131	C	T	C	Hoxd9.mouse_homeodomain_1	8	1	+	7.1462160923678635	5.746270592944195	GCCATAAAC
chr1	51729356	51729357	chr1:51729357:C:T	rs856600	C	T	C	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr1	52052491	52052492	chr1:52052492:A:G	rs12047841	A	G	A	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr1	52629909	52629910	chr1:52629910:A:G	rs11585624	A	G	G	Hoxd9.mouse_homeodomain_1	8	1	+	8.98901893988973	7.522691831404475	CCCATAAAA
chr1	52745285	52745286	chr1:52745286:G:A	rs11206004	G	A	g	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr1	52825877	52825878	chr1:52825878:A:G	rs1672917	A	G	A	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr1	53023928	53023929	chr1:53023929:C:T	rs7536048	C	T	c	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr1	53024310	53024311	chr1:53024311:G:A	rs58283791	G	A	N	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr1	53046681	53046682	chr1:53046682:T:G	rs75448253	T	G	T	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr1	53057695	53057696	chr1:53057696:A:T	rs76991838	A	T	A	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr1	53127157	53127158	chr1:53127158:A:G	rs11206104	A	G	T	Hoxd9.mouse_homeodomain_1	5	1	+	7.241935125048919	0.867745406802363	CCCATACAA
chr1	53134204	53134205	chr1:53134205:G:A	rs140939638	G	A	G	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr1	53206597	53206598	chr1:53206598:G:A	rs7539949	G	A	G	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr1	53402798	53402799	chr1:53402799:C:G	rs1288591	C	G	C	Hoxd9.mouse_homeodomain_1	1	1	+	8.409487817756228	1.9999545889738628	CCCATTAAA
chr1	53542397	53542398	chr1:53542398:C:T	rs141189676	C	T	C	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr1	53643232	53643233	chr1:53643233:T:C	rs10888802	T	C	C	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr1	53767837	53767838	chr1:53767838:T:C	rs71637818	T	C	T	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr1	53878608	53878609	chr1:53878609:C:A	rs2272928	C	A	A	Hoxd9.mouse_homeodomain_1	1	1	+	7.654940340027237	6.693135371129603	CCCGTAAAA
chr1	54049001	54049002	chr1:54049002:T:C	rs141252843	T	C	T	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr1	54135347	54135348	chr1:54135348:G:A	rs4927057	G	A	.	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr1	54303591	54303592	chr1:54303592:A:C	rs12740348	A	C	A	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr1	54303596	54303597	chr1:54303597:A:G	rs12740351	A	G	A	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr1	54303603	54303604	chr1:54303604:G:T	rs12038946	G	T	G	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr1	54485890	54485891	chr1:54485891:C:G	rs72899604	C	G	C	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr1	54489125	54489126	chr1:54489126:G:A	rs150234867	G	A	G	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr1	54719442	54719443	chr1:54719443:A:G	rs80232125	A	G	A	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr1	54740028	54740029	chr1:54740029:C:T	rs10888874	C	T	T	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr1	54764289	54764290	chr1:54764290:C:G	rs1038199899	C	G	C	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr1	54764295	54764296	chr1:54764296:G:C	rs530519391	G	C	G	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr1	54857762	54857763	chr1:54857763:C:A	rs71637874	C	A	C	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr1	55310695	55310696	chr1:55310696:T:C	rs11800932	T	C	T	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr1	55310723	55310724	chr1:55310724:G:T	rs527683033	G	T	G	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr1	55329315	55329316	chr1:55329316:C:T	rs574704661	C	T	C	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr1	55329316	55329317	chr1:55329317:G:A	rs143173638	G	A	G	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr1	55329328	55329329	chr1:55329329:T:C	rs17111956	T	C	T	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr1	55375682	55375683	chr1:55375683:C:T	rs142624075	C	T	C	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr1	55429394	55429395	chr1:55429395:C:A	rs147275779	C	A	C	Hoxd9.mouse_homeodomain_1	2	1	+	7.522691831404475	6.821135972517665	CCCATAAAG
chr1	55440462	55440463	chr1:55440463:G:A	rs4636512	G	A	G	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr1	55457311	55457312	chr1:55457312:T:C	rs397876	T	C	C	Hoxd9.mouse_homeodomain_1	3	1	-	8.678783717710262	7.34470511784777	GCCATAAAA
chr1	55529166	55529167	chr1:55529167:A:G	rs61774737	A	G	A	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr1	55931285	55931286	chr1:55931286:T:G	rs4927278	T	G	G	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr1	56001235	56001236	chr1:56001236:G:A	rs11206712	G	A	A	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr1	56278333	56278334	chr1:56278334:C:T	rs2404524	C	T	C	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr1	56390016	56390017	chr1:56390017:G:A	rs60328132	G	A	G	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr1	56410887	56410888	chr1:56410888:G:A	rs4489603	G	A	A	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr1	56429498	56429499	chr1:56429499:C:T	rs2780299	C	T	T	Hoxd9.mouse_homeodomain_1	2	1	+	8.027213970992095	1.5397735133684596	CACATAAAA
chr1	56466921	56466922	chr1:56466922:G:A	rs6670090	G	A	A	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr1	56468793	56468794	chr1:56468794:G:A	rs6676745	G	A	G	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr1	56787767	56787768	chr1:56787768:A:T	rs10889016	A	T	A	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr1	56839598	56839599	chr1:56839599:G:A	rs12117313	G	A	G	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr1	56878223	56878224	chr1:56878224:C:T	rs2269115	C	T	C	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr1	56883940	56883941	chr1:56883941:T:C	rs10489624	T	C	T	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr1	57089717	57089718	chr1:57089718:A:G	rs11206971	A	G	A	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr1	57175801	57175802	chr1:57175802:G:A	rs7530049	G	A	A	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr1	57239104	57239105	chr1:57239105:T:C	rs561248	T	C	T	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr1	57272252	57272253	chr1:57272253:A:T	rs12136813	A	T	T	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr1	57340799	57340800	chr1:57340800:T:C	rs11207012	T	C	T	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr1	57362753	57362754	chr1:57362754:T:A	rs536506011	T	A	.	Hoxd9.mouse_homeodomain_1	7	1	-	7.1462160923678635	5.399132277527052	GCCATAAAC
chr1	57362760	57362761	chr1:57362761:C:T	rs11207018	C	T	.	Hoxd9.mouse_homeodomain_1	0	1	-	7.1462160923678635	6.357331058510722	GCCATAAAC
chr1	57370815	57370816	chr1:57370816:T:C	rs7540817	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.889898683853121	6.555820083990628	ACCATAAAA
chr1	58089728	58089729	chr1:58089729:T:C	rs9782929	T	C	T	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr1	58394564	58394565	chr1:58394565:T:C	rs338928	T	C	C	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr1	58569356	58569357	chr1:58569357:A:T	rs565617	A	T	A	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr1	58596595	58596596	chr1:58596596:T:C	rs11207270	T	C	C	Hoxd9.mouse_homeodomain_1	6	1	-	8.027213970992095	1.3233880244003648	CACATAAAA
chr1	58629006	58629007	chr1:58629007:A:T	rs59469255	A	T	A	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr1	58870674	58870675	chr1:58870675:C:T	rs58148829	C	T	C	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr1	58894311	58894312	chr1:58894312:G:C	rs4912204	G	C	G	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr1	59136325	59136326	chr1:59136326:T:C	rs3902349	T	C	C	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr1	59392909	59392910	chr1:59392910:G:A	rs11583924	G	A	G	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr1	59426982	59426983	chr1:59426983:C:T	rs946574	C	T	T	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr1	59599847	59599848	chr1:59599848:A:G	rs12757929	A	G	g	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr1	59663568	59663569	chr1:59663569:A:C	rs185602085	A	C	A	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr1	59705403	59705404	chr1:59705404:A:T	rs2407606	A	T	A	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr1	59947350	59947351	chr1:59947351:G:A	rs946785112	G	A	G	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr1	60106963	60106964	chr1:60106964:G:C	rs632341	G	C	C	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr1	60118239	60118240	chr1:60118240:C:T	rs637283	C	T	T	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr1	60490064	60490065	chr1:60490065:A:G	rs6587885	A	G	G	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr1	60504159	60504160	chr1:60504160:A:T	rs11207627	A	T	A	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr1	60637527	60637528	chr1:60637528:A:G	rs514512	A	G	G	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr1	60656199	60656200	chr1:60656200:C:A	rs489543	C	A	C	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr1	60657865	60657866	chr1:60657866:T:C	rs548089	T	C	C	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr1	60746896	60746897	chr1:60746897:G:A	rs6661743	G	A	A	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr1	60894506	60894507	chr1:60894507:T:C	rs1002005	T	C	T	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr1	60917601	60917602	chr1:60917602:G:A	rs10889202	G	A	G	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr1	61005675	61005676	chr1:61005676:C:T	rs141910383	C	T	C	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr1	61215801	61215802	chr1:61215802:T:C	rs11207714	T	C	T	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr1	61215827	61215828	chr1:61215828:G:A	rs333146	G	A	A	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr1	61395881	61395882	chr1:61395882:T:C	rs10889219	T	C	C	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr1	61403445	61403446	chr1:61403446:T:G	rs2474382	T	G	T	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr1	61450593	61450594	chr1:61450594:T:A	rs77154319	T	A	T	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr1	61485996	61485997	chr1:61485997:A:G	rs72668421	A	G	A	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr1	61540702	61540703	chr1:61540703:T:C	rs72668471	T	C	T	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr1	61873487	61873488	chr1:61873488:A:G	rs4518937	A	G	.	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr1	62029819	62029820	chr1:62029820:A:G	rs4915792	A	G	A	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr1	62092349	62092350	chr1:62092350:G:A	rs75323688	G	A	g	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr1	62182233	62182234	chr1:62182234:A:G	rs2481697	A	G	A	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr1	62191857	62191858	chr1:62191858:T:G	rs12116810	T	G	T	Hoxd9.mouse_homeodomain_1	8	1	-	7.241935125048919	5.709367499706518	CCCATACAA
chr1	62271168	62271169	chr1:62271169:A:G	rs12038843	A	G	A	Hoxd9.mouse_homeodomain_1	4	1	-	7.889898683853121	5.234852038990543	ACCATAAAA
chr1	62326073	62326074	chr1:62326074:A:G	rs2366210	A	G	A	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr1	62387413	62387414	chr1:62387414:C:T	rs7543765	C	T	T	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr1	62401443	62401444	chr1:62401444:G:A	rs72929746	G	A	A	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr1	62438623	62438624	chr1:62438624:C:T	rs12029068	C	T	C	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr1	62589798	62589799	chr1:62589799:G:A	rs11207996	G	A	G	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr1	62753912	62753913	chr1:62753913:G:A	rs61765880	G	A	G	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr1	62857071	62857072	chr1:62857072:C:T	rs1981067	C	T	C	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr1	63000750	63000751	chr1:63000751:C:G	rs11208084	C	G	C	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr1	63327483	63327484	chr1:63327484:A:G	rs10749738	A	G	G	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr1	63463725	63463726	chr1:63463726:C:T	rs35646587	C	T	c	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr1	63572435	63572436	chr1:63572436:G:T	rs6588050	G	T	G	Hoxd9.mouse_homeodomain_1	2	1	-	8.027213970992095	7.325658112105286	CACATAAAA
chr1	63581094	63581095	chr1:63581095:T:G	rs11800361	T	G	T	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr1	63799867	63799868	chr1:63799868:C:T	rs645558	C	T	C	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr1	63837079	63837080	chr1:63837080:C:T	rs72683045	C	T	C	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr1	63888906	63888907	chr1:63888907:G:A	rs855844	G	A	G	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr1	63892905	63892906	chr1:63892906:C:T	rs114283662	C	T	C	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr1	63984342	63984343	chr1:63984343:C:T	rs556849303	C	T	C	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr1	63988631	63988632	chr1:63988632:C:T	rs285354	C	T	C	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr1	64292764	64292765	chr1:64292765:T:A	rs825215	T	A	A	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr1	64680606	64680607	chr1:64680607:A:G	rs12044266	A	G	A	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr1	64911719	64911720	chr1:64911720:G:A	rs61784741	G	A	G	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr1	64994364	64994365	chr1:64994365:G:T	rs17127189	G	T	T	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr1	65036843	65036844	chr1:65036844:C:T	rs79695825	C	T	C	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr1	65170563	65170564	chr1:65170564:T:A	rs7545094	T	A	A	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr1	65253731	65253732	chr1:65253732:G:A	rs559043	G	A	G	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr1	65401835	65401836	chr1:65401836:G:A	rs4915691	G	A	A	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr1	65413198	65413199	chr1:65413199:C:T	rs9436293	C	T	-	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr1	65477513	65477514	chr1:65477514:G:A	rs61779815	G	A	A	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr1	65681153	65681154	chr1:65681154:T:C	rs11809917	T	C	T	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr1	65687722	65687723	chr1:65687723:C:T	rs182427699	C	T	C	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr1	65691441	65691442	chr1:65691442:T:C	rs17127905	T	C	T	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr1	65696897	65696898	chr1:65696898:C:T	rs61780864	C	T	C	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr1	65756072	65756073	chr1:65756073:A:C	rs10493386	A	C	A	Hoxd9.mouse_homeodomain_1	6	1	+	7.9772278588234515	6.230144043982641	GCAATAAAA
chr1	65964295	65964296	chr1:65964296:G:T	rs1318474	G	T	G	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr1	66365995	66365996	chr1:66365996:T:C	rs72674140	T	C	T	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr1	66464432	66464433	chr1:66464433:T:C	rs783331	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.889898683853121	6.555820083990628	ACCATAAAA
chr1	66504270	66504271	chr1:66504271:C:T	rs2121047	C	T	C	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr1	66504279	66504280	chr1:66504280:C:T	rs191292497	C	T	C	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr1	66640084	66640085	chr1:66640085:A:G	rs115997980	A	G	A	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr1	66680163	66680164	chr1:66680164:A:G	rs6588216	A	G	a	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr1	66693974	66693975	chr1:66693975:G:A	rs11208949	G	A	G	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr1	66763247	66763248	chr1:66763248:C:T	rs7530784	C	T	C	Hoxd9.mouse_homeodomain_1	2	1	+	7.34470511784777	0.8572646602241328	GCCGTAAAA
chr1	66998982	66998983	chr1:66998983:G:A	rs11208985	G	A	G	Hoxd9.mouse_homeodomain_1	0	1	-	8.027213970992095	6.132666665683155	CACATAAAA
chr1	67042230	67042231	chr1:67042231:C:G	rs7539628	C	G	C	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr1	67060725	67060726	chr1:67060726:T:C	rs11811977	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.287463081002919	6.953384481140425	CCAATAAAA
chr1	67340143	67340144	chr1:67340144:C:T	rs17129828	C	T	C	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr1	67535734	67535735	chr1:67535735:A:G	rs6702973	A	G	A	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr1	67646318	67646319	chr1:67646319:A:T	chr1:67646319:A:T	A	T	A	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr1	67655826	67655827	chr1:67655827:G:A	rs6588282	G	A	G	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr1	67692148	67692149	chr1:67692149:G:A	rs674058	G	A	A	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr1	67810122	67810123	chr1:67810123:G:C	rs72924736	G	C	G	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr1	67897184	67897185	chr1:67897185:T:C	rs74081895	T	C	T	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr1	67897806	67897807	chr1:67897807:A:C	rs12073947	A	C	C	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr1	67941900	67941901	chr1:67941901:C:T	rs1938426	C	T	C	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr1	67998309	67998310	chr1:67998310:A:G	rs11209189	A	G	A	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr1	68165672	68165673	chr1:68165673:C:T	rs6588304	C	T	C	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr1	68168573	68168574	chr1:68168574:G:A	rs1864569	G	A	G	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr1	68176363	68176364	chr1:68176364:T:C	rs2820498	T	C	C	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr1	68176380	68176381	chr1:68176381:A:G	rs34827621	A	G	A	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr1	68176382	68176383	chr1:68176383:G:T	rs12034190	G	T	G	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr1	68228835	68228836	chr1:68228836:T:G	rs1383678486	T	G	T	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr1	68307138	68307139	chr1:68307139:G:C	rs183607856	G	C	G	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr1	68591167	68591168	chr1:68591168:C:T	rs2473794	C	T	T	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr1	68863751	68863752	chr1:68863752:T:C	rs570142940	T	C	T	Hoxd9.mouse_homeodomain_1	8	1	-	7.241935125048919	5.775608016563663	CCCATACAA
chr1	69432760	69432761	chr1:69432761:G:C	rs7522980	G	C	G	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr1	69611766	69611767	chr1:69611767:T:C	rs1749501	T	C	C	Hoxd9.mouse_homeodomain_1	4	1	+	8.287463081002919	5.632416436140341	CCAATAAAA
chr1	70045008	70045009	chr1:70045009:C:T	rs6694380	C	T	C	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr1	70205814	70205815	chr1:70205815:G:A	rs750803202	G	A	g	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr1	70271340	70271341	chr1:70271341:A:C	rs61785283	A	C	A	Hoxd9.mouse_homeodomain_1	1	1	+	8.027213970992095	8.98901893988973	CACATAAAA
chr1	70275686	70275687	chr1:70275687:C:A	rs7552694	C	A	C	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr1	70375658	70375659	chr1:70375659:A:G	rs60469831	A	G	A	Hoxd9.mouse_homeodomain_1	4	1	-	8.099252595576761	5.444205950714182	GCCATTAAA
chr1	70410095	70410096	chr1:70410096:C:T	rs648743	C	T	C	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr1	70468575	70468576	chr1:70468576:G:A	rs8179319	G	A	A	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr1	70608223	70608224	chr1:70608224:A:G	rs1414066	A	G	T	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr1	71208244	71208245	chr1:71208245:A:T	rs17090979	A	T	A	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr1	71228717	71228718	chr1:71228718:G:T	rs149887975	G	T	G	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr1	71239420	71239421	chr1:71239421:A:T	rs2694955	A	T	A	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr1	71703844	71703845	chr1:71703845:G:T	rs6659689	G	T	G	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr1	71703875	71703876	chr1:71703876:T:A	rs12044128	T	A	T	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr1	71760193	71760194	chr1:71760194:C:G	rs1459796	C	G	G	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr1	71843325	71843326	chr1:71843326:C:A	rs577674	C	A	C	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr1	72063943	72063944	chr1:72063944:G:A	rs17092314	G	A	G	Hoxd9.mouse_homeodomain_1	3	1	+	7.654940340027237	8.98901893988973	CCCGTAAAA
chr1	72178901	72178902	chr1:72178902:T:C	rs12748679	T	C	T	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr1	72230965	72230966	chr1:72230966:A:G	rs78152876	A	G	A	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr1	72459785	72459786	chr1:72459786:T:C	rs111558538	T	C	T	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr1	72648876	72648877	chr1:72648877:A:G	rs6695500	A	G	A	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr1	73097940	73097941	chr1:73097941:T:C	rs74091268	T	C	T	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr1	73152456	73152457	chr1:73152457:C:T	rs4353042	C	T	T	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr1	73460888	73460889	chr1:73460889:T:C	rs496819	T	C	T	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr1	73517029	73517030	chr1:73517030:C:T	rs12757636	C	T	C	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr1	73833048	73833049	chr1:73833049:T:C	rs17094450	T	C	T	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr1	73948818	73948819	chr1:73948819:C:T	rs77031007	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	+	7.45645131454733	5.561904009238388	CCCATAAAC
chr1	74247789	74247790	chr1:74247790:T:A	rs113465300	T	A	T	Hoxd9.mouse_homeodomain_1	4	1	+	7.716978748812629	0.875160301482023	GACATAAAA
chr1	74526861	74526862	chr1:74526862:G:C	rs6604866	G	C	C	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr1	74620727	74620728	chr1:74620728:G:C	rs41289218	G	C	G	Hoxd9.mouse_homeodomain_1	2	1	-	8.027213970992095	4.559222313539767	CACATAAAA
chr1	74995359	74995360	chr1:74995360:G:A	rs11162359	G	A	G	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr1	75133214	75133215	chr1:75133215:C:T	rs1526505	C	T	C	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr1	75725292	75725293	chr1:75725293:A:G	rs1250874	A	G	A	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr1	75786649	75786650	chr1:75786650:A:G	rs1146635	A	G	G	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr1	76048073	76048074	chr1:76048074:C:T	rs1013629	C	T	C	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr1	76289057	76289058	chr1:76289058:A:G	rs34995712	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.287463081002919	6.953384481140425	CCAATAAAA
chr1	76289066	76289067	chr1:76289067:G:A	rs36115631	G	A	G	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr1	76389507	76389508	chr1:76389508:T:G	rs2031483	T	G	t	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr1	76404249	76404250	chr1:76404250:C:T	rs57349323	C	T	C	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr1	76543590	76543591	chr1:76543591:A:G	rs1369804	A	G	A	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr1	76770553	76770554	chr1:76770554:C:G	rs3862898	C	G	C	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr1	77101087	77101088	chr1:77101088:T:G	rs11807652	T	G	T	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr1	77322776	77322777	chr1:77322777:C:G	rs17100317	C	G	C	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr1	77333674	77333675	chr1:77333675:T:C	rs12059542	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.287463081002919	6.953384481140425	CCAATAAAA
chr1	77447389	77447390	chr1:77447390:A:T	rs1357914512	A	T	A	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr1	77460609	77460610	chr1:77460610:A:C	rs7534707	A	C	A	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr1	77874982	77874983	chr1:77874983:T:C	rs77222879	T	C	T	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr1	77945562	77945563	chr1:77945563:C:G	chr1:77945563:C:G	C	G	C	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr1	78298527	78298528	chr1:78298528:A:G	rs77012317	A	G	A	Hoxd9.mouse_homeodomain_1	8	1	+	8.98901893988973	7.522691831404475	CCCATAAAA
chr1	78387944	78387945	chr1:78387945:T:C	rs140994146	T	C	T	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr1	78620243	78620244	chr1:78620244:C:T	rs79231828	C	T	C	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr1	78728083	78728084	chr1:78728084:G:C	rs11580068	G	C	G	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr1	78730585	78730586	chr1:78730586:C:T	rs11162546	C	T	T	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr1	78790419	78790420	chr1:78790420:C:T	rs2352521	C	T	T	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr1	79042465	79042466	chr1:79042466:C:T	rs1332817	C	T	C	Hoxd9.mouse_homeodomain_1	2	1	+	7.34470511784777	0.8572646602241328	GCCGTAAAA
chr1	79196370	79196371	chr1:79196371:G:A	rs78197376	G	A	G	Hoxd9.mouse_homeodomain_1	5	1	-	7.091711387329735	8.409487817756228	CCCATCAAA
chr1	79265204	79265205	chr1:79265205:T:G	rs11162666	T	G	G	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr1	79293546	79293547	chr1:79293547:G:A	rs7515632	G	A	G	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr1	79298806	79298807	chr1:79298807:A:C	rs1331714	A	C	C	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr1	79519062	79519063	chr1:79519063:A:G	rs1389942	A	G	G	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr1	79633531	79633532	chr1:79633532:C:T	rs11162765	C	T	T	Hoxd9.mouse_homeodomain_1	0	1	+	8.287463081002919	6.392915775693977	CCAATAAAA
chr1	79853288	79853289	chr1:79853289:G:A	rs12128751	G	A	A	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr1	79961255	79961256	chr1:79961256:G:A	rs59021320	G	A	G	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr1	80122980	80122981	chr1:80122981:G:A	rs4253878	G	A	A	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr1	80547752	80547753	chr1:80547753:G:A	rs11163051	G	A	G	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr1	80656821	80656822	chr1:80656822:C:T	rs6686788	C	T	C	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr1	80712045	80712046	chr1:80712046:C:T	rs841665	C	T	T	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr1	81065660	81065661	chr1:81065661:G:C	rs55791105	G	C	G	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr1	81073646	81073647	chr1:81073647:A:G	rs1377570909	A	G	A	Hoxd9.mouse_homeodomain_1	5	1	+	7.522691831404475	1.1485021131579192	CCCATAAAG
chr1	81125712	81125713	chr1:81125713:C:T	rs1768398	C	T	T	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr1	81125729	81125730	chr1:81125730:C:T	rs1768397	C	T	T	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr1	81152295	81152296	chr1:81152296:C:T	rs12066876	C	T	T	Hoxd9.mouse_homeodomain_1	0	1	-	8.678783717710262	7.889898683853121	GCCATAAAA
chr1	81304252	81304253	chr1:81304253:A:G	rs12059808	A	G	A	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr1	81304264	81304265	chr1:81304265:A:T	rs12059809	A	T	T	Hoxd9.mouse_homeodomain_1	6	1	+	7.889898683853121	5.000482913822536	ACCATAAAA
chr1	81314854	81314855	chr1:81314855:A:G	rs17452799	A	G	G	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr1	81355755	81355756	chr1:81355756:T:C	rs10874219	T	C	T	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr1	81606895	81606896	chr1:81606896:A:T	rs7542573	A	T	T	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr1	81619228	81619229	chr1:81619229:G:A	rs11163340	G	A	A	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr1	81760189	81760190	chr1:81760190:A:C	rs9324188	A	C	A	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr1	81832910	81832911	chr1:81832911:T:A	rs13374408	T	A	T	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr1	81844862	81844863	chr1:81844863:G:A	rs796248	G	A	G	Hoxd9.mouse_homeodomain_1	2	1	-	7.716978748812629	1.2295382911889927	GACATAAAA
chr1	81999340	81999341	chr1:81999341:G:A	rs17472107	G	A	G	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr1	82265560	82265561	chr1:82265561:A:T	rs56379451	A	T	A	Hoxd9.mouse_homeodomain_1	4	1	-	8.027213970992095	1.1853955236614904	CACATAAAA
chr1	82265567	82265568	chr1:82265568:G:A	rs6660311	G	A	G	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr1	82265837	82265838	chr1:82265838:T:G	rs6678104	T	G	T	Hoxd9.mouse_homeodomain_1	6	1	-	7.212456609225008	5.465372794384197	GCCATAAAG
chr1	82895999	82896000	chr1:82896000:C:T	rs12134714	C	T	C	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr1	83666105	83666106	chr1:83666106:A:G	rs4243781	A	G	A	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr1	83895924	83895925	chr1:83895925:C:T	rs4907188	C	T	T	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr1	84031957	84031958	chr1:84031958:T:A	rs684651	T	A	A	Hoxd9.mouse_homeodomain_1	4	1	+	8.287463081002919	1.445644633672313	CCAATAAAA
chr1	84265218	84265219	chr1:84265219:C:T	rs76384757	C	T	C	Hoxd9.mouse_homeodomain_1	2	1	+	8.027213970992095	1.5397735133684596	CACATAAAA
chr1	84634806	84634807	chr1:84634807:T:G	rs74095491	T	G	T	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr1	84703738	84703739	chr1:84703739:G:A	rs4551615	G	A	A	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr1	84721238	84721239	chr1:84721239:A:C	rs2911585	A	C	A	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr1	84774497	84774498	chr1:84774498:C:G	rs2389777	C	G	C	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr1	84776780	84776781	chr1:84776781:A:T	rs185816870	A	T	A	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr1	84887981	84887982	chr1:84887982:A:G	rs147672681	A	G	A	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr1	84973620	84973621	chr1:84973621:T:G	rs589653	T	G	G	Hoxd9.mouse_homeodomain_1	8	1	-	8.027213970992095	6.494646345649697	CACATAAAA
chr1	85014803	85014804	chr1:85014804:G:A	rs118150353	G	A	G	Hoxd9.mouse_homeodomain_1	3	1	+	7.654940340027237	8.98901893988973	CCCGTAAAA
chr1	85049960	85049961	chr1:85049961:G:A	rs12041012	G	A	G	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr1	85258599	85258600	chr1:85258600:C:T	rs75989026	C	T	C	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr1	85258644	85258645	chr1:85258645:C:T	rs4949926	C	T	C	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr1	85261360	85261361	chr1:85261361:T:C	rs11161574	T	C	C	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr1	85289488	85289489	chr1:85289489:A:G	rs534691421	A	G	A	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr1	85297921	85297922	chr1:85297922:C:T	rs184378755	C	T	C	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr1	85418340	85418341	chr1:85418341:T:C	rs7539738	T	C	T	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr1	85418392	85418393	chr1:85418393:C:T	rs7525786	C	T	C	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr1	85494998	85494999	chr1:85494999:A:G	rs547180357	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	7.241935125048919	5.907856525186427	CCCATACAA
chr1	85777579	85777580	chr1:85777580:C:T	rs114655065	C	T	T	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr1	85976572	85976573	chr1:85976573:C:T	rs474832	C	T	c	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr1	86192688	86192689	chr1:86192689:T:C	rs111868233	T	C	T	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr1	86199872	86199873	chr1:86199873:G:T	rs1507268	G	T	G	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr1	86380365	86380366	chr1:86380366:A:G	rs4656044	A	G	A	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr1	86430653	86430654	chr1:86430654:A:C	rs115342725	A	C	A	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr1	86430670	86430671	chr1:86430671:G:A	rs4292929	G	A	A	Hoxd9.mouse_homeodomain_1	1	1	-	7.889898683853121	6.575096769520114	ACCATAAAA
chr1	86696885	86696886	chr1:86696886:A:G	rs573848	A	G	A	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr1	86866498	86866499	chr1:86866499:G:A	rs487431	G	A	G	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr1	87053340	87053341	chr1:87053341:A:G	rs61773085	A	G	A	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr1	87065189	87065190	chr1:87065190:A:G	rs367976612	A	G	A	Hoxd9.mouse_homeodomain_1	4	1	-	8.98901893988973	6.333972295027152	CCCATAAAA
chr1	87151257	87151258	chr1:87151258:A:C	rs6663703	A	C	A	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr1	87167793	87167794	chr1:87167794:C:T	rs1998713	C	T	T	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr1	87194662	87194663	chr1:87194663:A:G	rs3890850	A	G	G	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr1	87221000	87221001	chr1:87221001:G:A	rs6576875	G	A	A	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr1	87251291	87251292	chr1:87251292:C:G	rs116411550	C	G	C	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr1	87584768	87584769	chr1:87584769:C:T	rs76709829	C	T	C	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr1	87588703	87588704	chr1:87588704:C:A	rs6576909	C	A	C	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr1	87588709	87588710	chr1:87588710:G:A	rs376349782	G	A	G	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr1	87718160	87718161	chr1:87718161:T:A	rs735800	T	A	T	Hoxd9.mouse_homeodomain_1	5	1	-	8.98901893988973	8.409487817756228	CCCATAAAA
chr1	87826977	87826978	chr1:87826978:T:C	rs13375846	T	C	T	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr1	87980551	87980552	chr1:87980552:C:T	rs12757947	C	T	C	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr1	87980552	87980553	chr1:87980553:G:A	rs17130230	G	A	A	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr1	88140493	88140494	chr1:88140494:A:G	rs72718541	A	G	A	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr1	88237012	88237013	chr1:88237013:C:T	rs75391630	C	T	C	Hoxd9.mouse_homeodomain_1	2	1	+	6.943160709270972	0.4557202516473358	CCCATTAAG
chr1	88485091	88485092	chr1:88485092:T:C	rs10923081	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.9772278588234515	6.643149258960959	GCAATAAAA
chr1	89043417	89043418	chr1:89043418:G:A	rs559074573	G	A	G	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr1	89045445	89045446	chr1:89045446:T:G	rs575377524	T	G	T	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr1	89052234	89052235	chr1:89052235:C:T	rs12408132	C	T	T	Hoxd9.mouse_homeodomain_1	2	1	+	7.212456609225008	0.7250161516013711	GCCATAAAG
chr1	89129089	89129090	chr1:89129090:C:T	rs181287654	C	T	C	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr1	89129093	89129094	chr1:89129094:G:A	rs116239772	G	A	G	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr1	89199261	89199262	chr1:89199262:T:C	rs647273	T	C	T	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr1	89615851	89615852	chr1:89615852:T:G	chr1:89615852:T:G	T	G	T	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr1	89641941	89641942	chr1:89641942:A:G	rs1934044	A	G	G	Hoxd9.mouse_homeodomain_1	4	1	-	8.027213970992095	5.372167326129518	CACATAAAA
chr1	89763027	89763028	chr1:89763028:C:G	rs41305844	C	G	C	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr1	89918541	89918542	chr1:89918542:A:G	rs2816843	A	G	a	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr1	89939202	89939203	chr1:89939203:G:A	rs183585633	G	A	G	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr1	89939630	89939631	chr1:89939631:A:T	rs12142526	A	T	A	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr1	90067392	90067393	chr1:90067393:C:G	rs114377071	C	G	C	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr1	90102589	90102590	chr1:90102590:G:A	rs12122986	G	A	G	Hoxd9.mouse_homeodomain_1	0	1	+	7.9772278588234515	7.188342824966311	GCAATAAAA
chr1	90176235	90176236	chr1:90176236:C:T	rs9782925	C	T	C	Hoxd9.mouse_homeodomain_1	1	1	+	7.9772278588234515	6.662425944490444	GCAATAAAA
chr1	90273241	90273242	chr1:90273242:C:T	rs4233435	C	T	T	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr1	90797556	90797557	chr1:90797557:A:G	chr1:90797557:A:G	A	G	A	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr1	91124672	91124673	chr1:91124673:C:T	rs1828024	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	-	8.099252595576761	7.3103675617196195	GCCATTAAA
chr1	91458136	91458137	chr1:91458137:A:G	rs113406065	A	G	G	Hoxd9.mouse_homeodomain_1	6	1	+	8.287463081002919	1.5836371344111884	CCAATAAAA
chr1	91551095	91551096	chr1:91551096:T:C	rs1949009	T	C	t	Hoxd9.mouse_homeodomain_1	3	1	-	7.212456609225008	5.878378009362515	GCCATAAAG
chr1	91582854	91582855	chr1:91582855:T:G	rs12023428	T	G	T	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr1	91734744	91734745	chr1:91734745:C:T	rs141107775	C	T	C	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr1	91736877	91736878	chr1:91736878:C:G	rs10874915	C	G	C	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr1	91753806	91753807	chr1:91753807:T:A	rs12038005	T	A	T	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr1	91768820	91768821	chr1:91768821:G:A	rs284186	G	A	G	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr1	91768843	91768844	chr1:91768844:A:G	rs284187	A	G	A	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr1	91891568	91891569	chr1:91891569:C:G	rs12080220	C	G	C	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr1	92300507	92300508	chr1:92300508:C:G	rs17578954	C	G	C	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr1	92476908	92476909	chr1:92476909:G:A	rs942753	G	A	A	Hoxd9.mouse_homeodomain_1	1	1	-	8.98901893988973	7.674217025556723	CCCATAAAA
chr1	92487087	92487088	chr1:92487088:A:G	chr1:92487088:A:G	A	G	A	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr1	92487102	92487103	chr1:92487103:T:A	rs191594978	T	A	T	Hoxd9.mouse_homeodomain_1	4	1	+	8.678783717710262	1.8369652703796566	GCCATAAAA
chr1	92487102	92487103	chr1:92487103:T:C	chr1:92487103:T:C	T	C	T	Hoxd9.mouse_homeodomain_1	4	1	+	8.678783717710262	6.023737072847684	GCCATAAAA
chr1	92653852	92653853	chr1:92653853:G:A	rs11578098	G	A	G	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr1	92881014	92881015	chr1:92881015:C:T	rs2481711	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	+	8.98901893988973	7.094471634580788	CCCATAAAA
chr1	92952772	92952773	chr1:92952773:A:T	rs4308991	A	T	-	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr1	92961673	92961674	chr1:92961674:C:G	rs6681240	C	G	C	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr1	92961674	92961675	chr1:92961675:G:C	rs535565141	G	C	G	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr1	93347503	93347504	chr1:93347504:C:G	rs77637214	C	G	C	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr1	93564976	93564977	chr1:93564977:C:T	rs237435	C	T	T	Hoxd9.mouse_homeodomain_1	1	1	+	8.099252595576761	6.784450681243753	GCCATTAAA
chr1	93690233	93690234	chr1:93690234:C:T	rs12059154	C	T	T	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr1	93768856	93768857	chr1:93768857:T:C	rs12409459	T	C	T	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr1	94143336	94143337	chr1:94143337:G:C	rs871661	G	C	G	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr1	94326867	94326868	chr1:94326868:T:C	rs17111426	T	C	T	Hoxd9.mouse_homeodomain_1	8	1	-	7.091711387329735	5.6253842788444794	CCCATCAAA
chr1	94326892	94326893	chr1:94326893:C:T	rs11584317	C	T	C	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr1	94362761	94362762	chr1:94362762:C:T	chr1:94362762:C:T	C	T	C	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr1	94427636	94427637	chr1:94427637:T:A	rs115618796	T	A	T	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr1	94587657	94587658	chr1:94587658:C:T	rs11165176	C	T	C	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr1	94587681	94587682	chr1:94587682:T:A	rs1324217	T	A	A	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr1	94634202	94634203	chr1:94634203:C:T	rs9645363	C	T	C	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr1	94634990	94634991	chr1:94634991:T:C	chr1:94634991:T:C	T	C	T	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr1	94656961	94656962	chr1:94656962:T:G	rs17111996	T	G	T	Hoxd9.mouse_homeodomain_1	5	1	-	7.889898683853121	5.992591131293127	ACCATAAAA
chr1	94687135	94687136	chr1:94687136:A:G	rs865848	A	G	A	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr1	94687159	94687160	chr1:94687160:T:C	rs1344170	T	C	T	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr1	94687160	94687161	chr1:94687161:G:T	rs3905416	G	T	G	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr1	94850596	94850597	chr1:94850597:T:C	rs12025599	T	C	T	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr1	94902092	94902093	chr1:94902093:T:C	rs859058	T	C	T	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr1	94902112	94902113	chr1:94902113:G:A	rs2275613	G	A	G	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr1	94981108	94981109	chr1:94981109:G:C	rs182469782	G	C	G	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr1	95043027	95043028	chr1:95043028:A:C	rs60555923	A	C	C	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr1	95069889	95069890	chr1:95069890:A:C	rs6683112	A	C	A	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr1	95156970	95156971	chr1:95156971:C:T	rs35143903	C	T	C	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr1	95239496	95239497	chr1:95239497:A:G	rs3767316	A	G	A	Hoxd9.mouse_homeodomain_1	4	1	-	7.9772278588234515	5.3221812139608735	GCAATAAAA
chr1	95652750	95652751	chr1:95652751:G:A	rs17114028	G	A	G	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr1	95903213	95903214	chr1:95903214:G:A	rs35743264	G	A	G	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr1	95927429	95927430	chr1:95927430:G:A	rs17114320	G	A	G	Hoxd9.mouse_homeodomain_1	2	1	-	8.98901893988973	2.5015784822660927	CCCATAAAA
chr1	95992767	95992768	chr1:95992768:C:T	rs2125421	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	+	8.027213970992095	6.132666665683155	CACATAAAA
chr1	96010223	96010224	chr1:96010224:G:A	rs146815349	G	A	G	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr1	96010237	96010238	chr1:96010238:A:G	rs531312120	A	G	A	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr1	96332250	96332251	chr1:96332251:C:T	rs326671	C	T	C	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr1	96427443	96427444	chr1:96427444:G:A	rs11165623	G	A	A	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr1	96558772	96558773	chr1:96558773:G:A	rs2391799	G	A	G	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr1	97051522	97051523	chr1:97051523:A:T	rs290841	A	T	A	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr1	97092056	97092057	chr1:97092057:C:T	rs72724369	C	T	C	Hoxd9.mouse_homeodomain_1	2	1	+	8.099252595576761	1.6118121379531245	GCCATTAAA
chr1	97143910	97143911	chr1:97143911:G:A	rs76110644	G	A	G	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr1	97412511	97412512	chr1:97412512:C:T	rs11165867	C	T	C	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr1	97412904	97412905	chr1:97412905:G:A	rs6687374	G	A	A	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr1	97817105	97817106	chr1:97817106:C:T	rs1984091	C	T	c	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr1	98254666	98254667	chr1:98254667:G:A	rs1155645	G	A	g	Hoxd9.mouse_homeodomain_1	2	1	-	7.716978748812629	1.2295382911889927	GACATAAAA
chr1	98356016	98356017	chr1:98356017:G:A	rs77165959	G	A	G	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr1	98390101	98390102	chr1:98390102:C:G	rs115706908	C	G	C	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr1	98432143	98432144	chr1:98432144:A:G	rs12034466	A	G	A	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr1	98791125	98791126	chr1:98791126:C:A	rs59972900	C	A	C	Hoxd9.mouse_homeodomain_1	0	1	+	8.409487817756228	7.3103675617196195	CCCATTAAA
chr1	99132271	99132272	chr1:99132272:G:A	rs982510620	G	A	G	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr1	99180666	99180667	chr1:99180667:T:C	rs17491965	T	C	T	Hoxd9.mouse_homeodomain_1	2	1	-	7.9772278588234515	5.2107920602579325	GCAATAAAA
chr1	99374326	99374327	chr1:99374327:G:A	rs11166236	G	A	G	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr1	99438915	99438916	chr1:99438916:A:G	rs72959012	A	G	A	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr1	99441911	99441912	chr1:99441912:T:C	rs76354105	T	C	T	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr1	99441927	99441928	chr1:99441928:G:A	rs781420680	G	A	G	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr1	99476293	99476294	chr1:99476294:G:A	rs4626907	G	A	A	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr1	99557939	99557940	chr1:99557940:A:G	rs111473188	A	G	A	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr1	99636728	99636729	chr1:99636729:A:G	rs12730100	A	G	A	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr1	99707777	99707778	chr1:99707778:G:T	rs200650891	G	T	G	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr1	99753453	99753454	chr1:99753454:C:T	rs6577135	C	T	T	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr1	99809016	99809017	chr1:99809017:C:G	rs17408165	C	G	C	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr1	99809023	99809024	chr1:99809024:G:T	rs576799652	G	T	G	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr1	100378200	100378201	chr1:100378201:C:A	rs17122341	C	A	A	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr1	100526077	100526078	chr1:100526078:G:C	rs11166469	G	C	G	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr1	100526092	100526093	chr1:100526093:C:A	rs11166470	C	A	C	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr1	100565147	100565148	chr1:100565148:C:A	rs74851423	C	A	C	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr1	100565153	100565154	chr1:100565154:G:T	rs115255076	G	T	G	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr1	100623696	100623697	chr1:100623697:C:T	rs1577509	C	T	C	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr1	101136897	101136898	chr1:101136898:A:G	rs589045	A	G	A	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr1	101191125	101191126	chr1:101191126:A:C	rs34693270	A	C	C	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr1	101191132	101191133	chr1:101191133:C:T	rs74106749	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	+	8.027213970992095	6.132666665683155	CACATAAAA
chr1	101237594	101237595	chr1:101237595:C:T	rs1050691441	C	T	C	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr1	101239238	101239239	chr1:101239239:C:T	chr1:101239239:C:T	C	T	C	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr1	101251131	101251132	chr1:101251132:C:T	rs765344	C	T	C	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr1	101266387	101266388	chr1:101266388:G:A	rs9434159	G	A	G	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr1	101307408	101307409	chr1:101307409:G:A	rs4531310	G	A	A	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr1	101367802	101367803	chr1:101367803:G:A	rs11586606	G	A	G	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr1	101367816	101367817	chr1:101367817:A:T	rs4908136	A	T	T	Hoxd9.mouse_homeodomain_1	7	1	+	6.943160709270972	5.196076894430161	CCCATTAAG
chr1	101398989	101398990	chr1:101398990:T:A	rs114539337	T	A	T	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr1	101455248	101455249	chr1:101455249:T:C	rs11164201	T	C	C	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr1	101550537	101550538	chr1:101550538:A:G	rs1146717	A	G	G	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr1	101739300	101739301	chr1:101739301:G:T	rs6687256	G	T	T	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr1	102201424	102201425	chr1:102201425:T:C	rs12126674	T	C	T	Hoxd9.mouse_homeodomain_1	4	1	+	8.027213970992095	5.372167326129518	CACATAAAA
chr1	102766960	102766961	chr1:102766961:T:G	rs7521799	T	G	T	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr1	102774924	102774925	chr1:102774925:G:A	rs4907978	G	A	G	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr1	102896550	102896551	chr1:102896551:C:T	rs142314646	C	T	C	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr1	104071376	104071377	chr1:104071377:C:G	rs11185370	C	G	G	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr1	104073252	104073253	chr1:104073253:A:G	rs3811505	A	G	A	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr1	104118485	104118486	chr1:104118486:G:A	rs1932461	G	A	G	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr1	104604434	104604435	chr1:104604435:A:G	rs546928118	A	G	a	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr1	105005521	105005522	chr1:105005522:G:A	rs10881238	G	A	G	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr1	105499284	105499285	chr1:105499285:C:T	rs1710785	C	T	T	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr1	105556474	105556475	chr1:105556475:A:C	rs777080	A	C	A	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr1	105658423	105658424	chr1:105658424:T:C	rs4915113	T	C	T	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr1	105914259	105914260	chr1:105914260:G:C	rs12751498	G	C	G	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr1	106170934	106170935	chr1:106170935:T:A	rs115008134	T	A	T	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr1	106406132	106406133	chr1:106406133:G:A	rs1831384	G	A	G	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr1	106473027	106473028	chr1:106473028:C:A	rs781320724	C	A	C	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr1	106473028	106473029	chr1:106473029:G:A	rs1002109429	G	A	G	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr1	106576140	106576141	chr1:106576141:T:A	rs7536889	T	A	A	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr1	106768499	106768500	chr1:106768500:T:C	rs144257405	T	C	T	Hoxd9.mouse_homeodomain_1	4	1	+	7.091711387329735	4.436664742467157	CCCATCAAA
chr1	106802541	106802542	chr1:106802542:C:T	rs12072818	C	T	C	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr1	106843666	106843667	chr1:106843667:T:C	rs79951467	T	C	T	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr1	106953927	106953928	chr1:106953928:C:T	rs6582998	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	-	7.212456609225008	6.423571575367866	GCCATAAAG
chr1	107089918	107089919	chr1:107089919:T:C	rs1762490	T	C	T	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr1	107682495	107682496	chr1:107682496:T:C	rs2504454	T	C	T	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr1	107682496	107682497	chr1:107682497:G:A	rs188097172	G	A	G	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr1	107739548	107739549	chr1:107739549:C:T	rs144275569	C	T	C	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr1	107739589	107739590	chr1:107739590:A:T	rs12405204	A	T	A	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr1	107795948	107795949	chr1:107795949:C:T	rs6661857	C	T	C	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr1	107818361	107818362	chr1:107818362:G:A	rs11585637	G	A	G	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr1	107981505	107981506	chr1:107981506:C:T	rs548007478	C	T	C	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr1	108021255	108021256	chr1:108021256:G:A	rs11586472	G	A	G	Hoxd9.mouse_homeodomain_1	1	1	-	7.212456609225008	5.897654694892	GCCATAAAG
chr1	108540521	108540522	chr1:108540522:T:G	rs56803076	T	G	N	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr1	108670774	108670775	chr1:108670775:T:C	rs75215783	T	C	T	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr1	108695522	108695523	chr1:108695523:C:T	rs6703128	C	T	T	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr1	108839755	108839756	chr1:108839756:C:A	rs74631214	C	A	C	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr1	109043719	109043720	chr1:109043720:A:G	rs149163755	A	G	a	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr1	109143247	109143248	chr1:109143248:C:A	rs35742436	C	A	C	Hoxd9.mouse_homeodomain_1	0	1	+	7.241935125048919	6.1428148690123106	CCCATACAA
chr1	109213706	109213707	chr1:109213707:T:C	chr1:109213707:T:C	T	C	T	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr1	109294169	109294170	chr1:109294170:G:C	rs17036114	G	C	C	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr1	109389285	109389286	chr1:109389286:C:T	rs10745354	C	T	c	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr1	109503470	109503471	chr1:109503471:G:A	rs527277	G	A	A	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr1	109727542	109727543	chr1:109727543:T:C	rs114768190	T	C	T	Hoxd9.mouse_homeodomain_1	0	1	-	7.889898683853121	8.678783717710262	ACCATAAAA
chr1	109850940	109850941	chr1:109850941:G:A	rs116411982	G	A	g	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr1	109899169	109899170	chr1:109899170:A:G	rs333966	A	G	a	Hoxd9.mouse_homeodomain_1	3	1	+	7.45645131454733	6.122372714684838	CCCATAAAC
chr1	109970179	109970180	chr1:109970180:A:G	rs61246084	A	G	G	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr1	109991374	109991375	chr1:109991375:G:A	rs10857808	G	A	A	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr1	110173888	110173889	chr1:110173889:C:T	rs12747833	C	T	C	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr1	110261312	110261313	chr1:110261313:C:T	rs12146055	C	T	C	Hoxd9.mouse_homeodomain_1	1	1	+	7.9772278588234515	6.662425944490444	GCAATAAAA
chr1	110336395	110336396	chr1:110336396:A:G	rs151164038	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	7.889898683853121	6.555820083990628	ACCATAAAA
chr1	110486945	110486946	chr1:110486946:G:A	rs6537662	G	A	A	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr1	110515232	110515233	chr1:110515233:A:G	rs531046074	A	G	A	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr1	110539030	110539031	chr1:110539031:C:T	rs184424634	C	T	C	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr1	110614468	110614469	chr1:110614469:T:G	rs145030535	T	G	T	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr1	110783316	110783317	chr1:110783317:G:C	rs114338769	G	C	G	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr1	110785691	110785692	chr1:110785692:G:C	rs12566069	G	C	G	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr1	110786443	110786444	chr1:110786444:C:G	rs343807	C	G	C	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr1	111194014	111194015	chr1:111194015:T:C	rs657605	T	C	C	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr1	111194049	111194050	chr1:111194050:T:C	rs656843	T	C	T	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr1	111245632	111245633	chr1:111245633:G:A	rs3889380	G	A	G	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr1	111709838	111709839	chr1:111709839:G:A	rs480578	G	A	a	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr1	111730862	111730863	chr1:111730863:T:C	rs1546924	T	C	T	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr1	112027336	112027337	chr1:112027337:C:T	rs391886	C	T	C	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr1	112241450	112241451	chr1:112241451:A:C	rs1440165	A	C	A	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr1	112332825	112332826	chr1:112332826:G:A	rs114241594	G	A	G	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr1	112386983	112386984	chr1:112386984:C:G	rs114596583	C	G	c	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr1	112431313	112431314	chr1:112431314:T:C	rs72697100	T	C	T	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr1	112465598	112465599	chr1:112465599:G:T	rs1175646	G	T	G	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr1	112468621	112468622	chr1:112468622:C:T	rs7416024	C	T	C	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr1	112714216	112714217	chr1:112714217:T:G	rs545091431	T	G	T	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr1	112850874	112850875	chr1:112850875:T:G	rs6702269	T	G	G	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr1	112964629	112964630	chr1:112964630:G:A	rs72683454	G	A	G	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr1	113036164	113036165	chr1:113036165:T:C	rs11584535	T	C	C	Hoxd9.mouse_homeodomain_1	3	1	-	8.678783717710262	7.34470511784777	GCCATAAAA
chr1	113185543	113185544	chr1:113185544:A:G	rs1228266	A	G	A	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr1	113303773	113303774	chr1:113303774:A:G	rs773591	A	G	G	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr1	113308576	113308577	chr1:113308577:C:T	rs958389422	C	T	C	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr1	113887657	113887658	chr1:113887658:C:T	rs141475527	C	T	C	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr1	113966111	113966112	chr1:113966112:A:C	chr1:113966112:A:C	A	C	A	Hoxd9.mouse_homeodomain_1	4	1	-	8.027213970992095	1.1853955236614904	CACATAAAA
chr1	113966134	113966135	chr1:113966135:G:A	rs35061908	G	A	G	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr1	114091776	114091777	chr1:114091777:C:T	rs1154699	C	T	C	Hoxd9.mouse_homeodomain_1	1	1	+	8.98901893988973	7.674217025556723	CCCATAAAA
chr1	114122862	114122863	chr1:114122863:G:A	rs12049045	G	A	G	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr1	114122908	114122909	chr1:114122909:C:A	rs12028206	C	A	C	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr1	115106134	115106135	chr1:115106135:G:A	rs1852989	G	A	G	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr1	115135751	115135752	chr1:115135752:C:A	rs1977304	C	A	C	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr1	115185959	115185960	chr1:115185960:G:A	rs1146165	G	A	G	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr1	115278024	115278025	chr1:115278025:A:T	rs111971442	A	T	A	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr1	115322770	115322771	chr1:115322771:C:A	rs11466074	C	A	C	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr1	115746152	115746153	chr1:115746153:G:A	rs10737732	G	A	A	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr1	115754227	115754228	chr1:115754228:C:A	rs17034481	C	A	C	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr1	116124088	116124089	chr1:116124089:C:T	rs767832	C	T	C	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr1	116178944	116178945	chr1:116178945:A:G	rs7540424	A	G	A	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr1	116260686	116260687	chr1:116260687:A:C	rs929361	A	C	A	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr1	116260699	116260700	chr1:116260700:T:G	rs929362	T	G	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.716978748812629	1.1414706446091483	GACATAAAA
chr1	116286079	116286080	chr1:116286080:A:G	rs740153	A	G	G	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr1	116287627	116287628	chr1:116287628:T:C	rs10737767	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.522691831404475	6.188613231541982	CCCATAAAG
chr1	116287634	116287635	chr1:116287635:T:A	rs10754441	T	A	T	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr1	116289341	116289342	chr1:116289342:C:T	rs76184964	C	T	C	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr1	116825974	116825975	chr1:116825975:A:G	rs73009101	A	G	A	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr1	116935483	116935484	chr1:116935484:G:A	rs2767325	G	A	G	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr1	116942590	116942591	chr1:116942591:A:T	rs888889738	A	T	A	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr1	117147242	117147243	chr1:117147243:G:T	rs76857330	G	T	G	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr1	117166041	117166042	chr1:117166042:T:C	rs1892410	T	C	T	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr1	117336443	117336444	chr1:117336444:C:T	rs878618	C	T	T	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr1	117363896	117363897	chr1:117363897:C:G	rs932329129	C	G	T	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr1	117566617	117566618	chr1:117566618:T:C	rs769052369	T	C	T	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr1	117579011	117579012	chr1:117579012:G:A	rs17037423	G	A	G	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr1	117615456	117615457	chr1:117615457:A:G	rs1775831	A	G	G	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr1	117615984	117615985	chr1:117615985:A:G	rs1657820	A	G	G	Hoxd9.mouse_homeodomain_1	4	1	-	8.099252595576761	5.444205950714182	GCCATTAAA
chr1	117615991	117615992	chr1:117615992:T:C	rs1775828	T	C	C	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr1	117696716	117696717	chr1:117696717:T:C	rs10923396	T	C	C	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr1	117810790	117810791	chr1:117810791:C:T	rs150085863	C	T	C	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr1	117814977	117814978	chr1:117814978:C:T	rs851310	C	T	C	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr1	117820511	117820512	chr1:117820512:T:C	rs2093199	T	C	C	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr1	117842733	117842734	chr1:117842734:G:A	rs1162514805	G	A	G	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr1	118116228	118116229	chr1:118116229:G:A	rs61838260	G	A	G	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr1	118341349	118341350	chr1:118341350:G:A	rs12735613	G	A	G	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr1	118412747	118412748	chr1:118412748:A:G	rs12133177	A	G	A	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr1	118650618	118650619	chr1:118650619:G:A	rs2145789	G	A	G	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr1	118929076	118929077	chr1:118929077:G:A	rs1031923505	G	A	G	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr1	119318836	119318837	chr1:119318837:C:A	rs725247	C	A	A	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr1	119330736	119330737	chr1:119330737:G:A	rs587677627	G	A	G	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr1	119483947	119483948	chr1:119483948:T:C	rs1188776218	T	C	.	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr1	119719441	119719442	chr1:119719442:T:C	rs41276624	T	C	T	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr1	119784831	119784832	chr1:119784832:T:G	rs6689072	T	G	T	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr1	120175833	120175834	chr1:120175834:A:C	rs1472967921	A	C	C	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr1	121443380	121443381	chr1:121443381:C:G	rs587748749	C	G	c	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr1	121740551	121740552	chr1:121740552:C:A	rs12729845	C	A	.	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr1	122074353	122074354	chr1:122074354:G:A	rs1411137421	G	A	.	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr1	122107687	122107688	chr1:122107688:C:A	chr1:122107688:C:A	C	A	.	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr1	122121997	122121998	chr1:122121998:A:C	rs1340906953	A	C	.	Hoxd9.mouse_homeodomain_1	1	1	+	8.027213970992095	8.98901893988973	CACATAAAA
chr1	124692125	124692126	chr1:124692126:C:T	rs1246493771	C	T	.	Hoxd9.mouse_homeodomain_1	2	1	+	8.027213970992095	1.5397735133684596	CACATAAAA
chr1	124692133	124692134	chr1:124692134:C:G	rs1413132136	C	G	.	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr1	124905512	124905513	chr1:124905513:G:T	rs1327084348	G	T	.	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr1	125118537	125118538	chr1:125118538:G:A	rs1238056563	G	A	.	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr1	145825493	145825494	chr1:145825494:A:T	rs116129062	A	T	A	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr1	146977317	146977318	chr1:146977318:G:A	rs587762675	G	A	.	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr1	147168679	147168680	chr1:147168680:G:T	rs6658465	G	T	G	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr1	147215078	147215079	chr1:147215079:A:G	rs6593746	A	G	A	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr1	147246220	147246221	chr1:147246221:C:T	rs12093458	C	T	T	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr1	147377891	147377892	chr1:147377892:G:A	rs1806617	G	A	G	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr1	147419675	147419676	chr1:147419676:T:A	rs4534446	T	A	T	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr1	147419680	147419681	chr1:147419681:T:C	rs4307607	T	C	C	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr1	147568213	147568214	chr1:147568214:T:A	rs76170364	T	A	T	Hoxd9.mouse_homeodomain_1	5	1	-	7.522691831404475	6.943160709270972	CCCATAAAG
chr1	147792182	147792183	chr1:147792183:C:A	rs1342707	C	A	C	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr1	147792182	147792183	chr1:147792183:C:T	chr1:147792183:C:T	C	T	C	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr1	148515921	148515922	chr1:148515922:G:A	rs1390449889	G	A	g	Hoxd9.mouse_homeodomain_1	8	1	-	7.45645131454733	6.056505815123662	CCCATAAAC
chr1	150152140	150152141	chr1:150152141:A:G	rs73011273	A	G	A	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr1	150464806	150464807	chr1:150464807:G:C	rs73019028	G	C	G	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr1	150477080	150477081	chr1:150477081:A:G	rs35094010	A	G	A	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr1	150477098	150477099	chr1:150477099:C:T	rs114082023	C	T	C	Hoxd9.mouse_homeodomain_1	8	1	-	7.212456609225008	8.678783717710262	GCCATAAAG
chr1	150516603	150516604	chr1:150516604:A:G	rs146194589	A	G	A	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr1	150579682	150579683	chr1:150579683:T:A	rs34468496	T	A	T	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr1	150579683	150579684	chr1:150579684:A:T	rs587625803	A	T	A	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr1	150660602	150660603	chr1:150660603:A:G	rs4970924	A	G	A	Hoxd9.mouse_homeodomain_1	6	1	+	7.1462160923678635	0.44239014577613167	GCCATAAAC
chr1	150697377	150697378	chr1:150697378:G:A	rs186675364	G	A	G	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr1	150753572	150753573	chr1:150753573:C:T	rs12757280	C	T	C	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr1	150757506	150757507	chr1:150757507:G:A	rs10888391	G	A	A	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr1	150840838	150840839	chr1:150840839:G:A	rs2039590	G	A	G	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr1	150846615	150846616	chr1:150846616:T:A	rs10305677	T	A	T	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr1	151009322	151009323	chr1:151009323:C:T	rs587668533	C	T	C	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr1	151070591	151070592	chr1:151070592:T:C	rs143824243	T	C	T	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr1	151444094	151444095	chr1:151444095:T:C	rs12063069	T	C	T	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr1	151574776	151574777	chr1:151574777:C:T	rs16833391	C	T	C	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr1	151611974	151611975	chr1:151611975:C:T	rs111464428	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	+	7.45645131454733	5.561904009238388	CCCATAAAC
chr1	151612001	151612002	chr1:151612002:C:T	rs73000031	C	T	C	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr1	152185469	152185470	chr1:152185470:G:A	rs12082805	G	A	G	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr1	152185485	152185486	chr1:152185486:T:A	rs12079160	T	A	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.889898683853121	5.886417547044477	ACCATAAAA
chr1	152247990	152247991	chr1:152247991:G:A	rs10749670	G	A	G	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr1	152478421	152478422	chr1:152478422:G:T	rs4845440	G	T	G	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr1	152954214	152954215	chr1:152954215:A:G	rs10494281	A	G	.	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr1	153028886	153028887	chr1:153028887:A:C	rs10888527	A	C	C	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr1	153123946	153123947	chr1:153123947:G:A	rs310133	G	A	g	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr1	153342817	153342818	chr1:153342818:T:C	rs2916213	T	C	C	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr1	153447162	153447163	chr1:153447163:T:C	rs3014832	T	C	c	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr1	153579014	153579015	chr1:153579015:C:T	rs116674798	C	T	C	Hoxd9.mouse_homeodomain_1	2	1	+	7.654940340027237	1.1674998824035994	CCCGTAAAA
chr1	153671093	153671094	chr1:153671094:A:G	rs116110657	A	G	A	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr1	154536863	154536864	chr1:154536864:T:C	rs60368585	T	C	T	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr1	154559407	154559408	chr1:154559408:G:T	rs560393250	G	T	G	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr1	154559433	154559434	chr1:154559434:G:A	rs4074436	G	A	G	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr1	154799566	154799567	chr1:154799567:C:G	rs12119516	C	G	C	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr1	154809412	154809413	chr1:154809413:G:A	rs7512194	G	A	G	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr1	154873797	154873798	chr1:154873798:C:T	rs883718	C	T	T	Hoxd9.mouse_homeodomain_1	1	1	+	7.212456609225008	5.897654694892	GCCATAAAG
chr1	154882578	154882579	chr1:154882579:G:A	rs1630500	G	A	G	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr1	155128694	155128695	chr1:155128695:C:T	rs66474937	C	T	C	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr1	155149445	155149446	chr1:155149446:A:G	rs7364524	A	G	G	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr1	155170450	155170451	chr1:155170451:A:G	rs4971089	A	G	G	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr1	155261899	155261900	chr1:155261900:A:G	rs148249935	A	G	A	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr1	155500365	155500366	chr1:155500366:C:T	rs117421991	C	T	C	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr1	155882331	155882332	chr1:155882332:C:T	rs729022	C	T	C	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr1	155910216	155910217	chr1:155910217:G:C	rs867548	G	C	G	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr1	155944875	155944876	chr1:155944876:A:T	chr1:155944876:A:T	A	T	A	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr1	155944898	155944899	chr1:155944899:G:C	rs529203796	G	C	G	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr1	155946074	155946075	chr1:155946075:G:A	rs558916018	G	A	G	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr1	156281822	156281823	chr1:156281823:G:A	rs117741780	G	A	G	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr1	156305489	156305490	chr1:156305490:G:A	rs7522860	G	A	A	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr1	156320864	156320865	chr1:156320865:T:C	rs11548200	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.716978748812629	6.382900148950135	GACATAAAA
chr1	156399473	156399474	chr1:156399474:A:G	rs4661040	A	G	G	Hoxd9.mouse_homeodomain_1	8	1	+	8.099252595576761	6.632925487091506	GCCATTAAA
chr1	156424207	156424208	chr1:156424208:G:A	rs7548323	G	A	A	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr1	156681809	156681810	chr1:156681810:G:C	rs11580324	G	C	G	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr1	156689912	156689913	chr1:156689913:A:G	rs370407831	A	G	A	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr1	156828932	156828933	chr1:156828933:C:T	rs6689750	C	T	T	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr1	157134677	157134678	chr1:157134678:C:G	rs6704373	C	G	G	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr1	157137821	157137822	chr1:157137822:C:T	rs12727705	C	T	C	Hoxd9.mouse_homeodomain_1	1	1	+	8.98901893988973	7.674217025556723	CCCATAAAA
chr1	157289165	157289166	chr1:157289166:G:C	rs12130167	G	C	N	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr1	157363597	157363598	chr1:157363598:T:C	rs116086787	T	C	t	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr1	157844212	157844213	chr1:157844213:A:G	rs548321309	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	7.522691831404475	6.188613231541982	CCCATAAAG
chr1	157962206	157962207	chr1:157962207:T:C	rs16839482	T	C	T	Hoxd9.mouse_homeodomain_1	8	1	-	8.027213970992095	6.560886862506841	CACATAAAA
chr1	157966305	157966306	chr1:157966306:C:T	rs140755851	C	T	C	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr1	158422384	158422385	chr1:158422385:T:C	rs142011419	T	C	T	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr1	158438454	158438455	chr1:158438455:T:C	rs6675399	T	C	T	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr1	158688372	158688373	chr1:158688373:T:A	rs857941	T	A	T	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr1	159022259	159022260	chr1:159022260:G:T	rs56985565	G	T	G	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr1	159022295	159022296	chr1:159022296:G:T	rs7535856	G	T	G	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr1	159077636	159077637	chr1:159077637:C:T	rs149588603	C	T	C	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr1	159369450	159369451	chr1:159369451:T:C	rs6692378	T	C	N	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr1	159518687	159518688	chr1:159518688:T:C	rs72698529	T	C	T	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr1	159952667	159952668	chr1:159952668:A:G	rs1317520	A	G	A	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr1	160381438	160381439	chr1:160381439:C:A	rs12404657	C	A	C	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr1	160397170	160397171	chr1:160397171:T:C	rs80321885	T	C	t	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr1	160643298	160643299	chr1:160643299:C:T	rs60130645	C	T	C	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr1	160661089	160661090	chr1:160661090:A:T	rs6664175	A	T	T	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr1	160766758	160766759	chr1:160766759:A:G	rs577260	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.027213970992095	6.693135371129603	CACATAAAA
chr1	160948166	160948167	chr1:160948167:G:T	rs114657146	G	T	.	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr1	161128810	161128811	chr1:161128811:G:A	rs150901375	G	A	G	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr1	161166346	161166347	chr1:161166347:A:G	chr1:161166347:A:G	A	G	A	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr1	161185601	161185602	chr1:161185602:G:A	rs4575098	G	A	G	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr1	161217062	161217063	chr1:161217063:C:T	rs115424149	C	T	C	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr1	161256950	161256951	chr1:161256951:G:A	rs4656998	G	A	g	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr1	161743292	161743293	chr1:161743293:G:T	rs114023433	G	T	G	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr1	161851113	161851114	chr1:161851114:A:G	rs3767635	A	G	A	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr1	162064863	162064864	chr1:162064864:C:T	chr1:162064864:C:T	C	T	C	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr1	162133479	162133480	chr1:162133480:T:C	rs10494368	T	C	T	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr1	162135261	162135262	chr1:162135262:T:A	rs1337070	T	A	A	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr1	162207731	162207732	chr1:162207732:C:T	rs4233386	C	T	C	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr1	162351187	162351188	chr1:162351188:C:T	rs6667219	C	T	C	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr1	162351190	162351191	chr1:162351191:A:C	rs6679782	A	C	A	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr1	162381663	162381664	chr1:162381664:A:G	rs12407972	A	G	A	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr1	162381664	162381665	chr1:162381665:G:T	rs1984871	G	T	G	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr1	162800531	162800532	chr1:162800532:T:G	rs142071192	T	G	T	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr1	162964677	162964678	chr1:162964678:A:T	rs6427702	A	T	A	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr1	163067526	163067527	chr1:163067527:G:A	rs6678136	G	A	G	Hoxd9.mouse_homeodomain_1	0	1	+	7.716978748812629	6.928093714955487	GACATAAAA
chr1	163157156	163157157	chr1:163157157:G:C	rs16849933	G	C	G	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr1	163178788	163178789	chr1:163178789:C:T	rs78944764	C	T	C	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr1	163211875	163211876	chr1:163211876:C:T	rs35792769	C	T	C	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr1	163359207	163359208	chr1:163359208:T:C	rs116298546	T	C	T	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr1	163692855	163692856	chr1:163692856:G:A	rs1281993564	G	A	G	Hoxd9.mouse_homeodomain_1	8	1	-	7.45645131454733	6.056505815123662	CCCATAAAC
chr1	163864084	163864085	chr1:163864085:C:T	rs11580193	C	T	C	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr1	163967501	163967502	chr1:163967502:A:G	rs1838414	A	G	G	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr1	164240121	164240122	chr1:164240122:G:C	rs61803044	G	C	G	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr1	164563853	164563854	chr1:164563854:G:T	rs12040395	G	T	G	Hoxd9.mouse_homeodomain_1	1	1	-	7.9772278588234515	7.0154228899258175	GCAATAAAA
chr1	164564406	164564407	chr1:164564407:G:A	rs57428165	G	A	G	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr1	164564409	164564410	chr1:164564410:C:T	rs144630410	C	T	C	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr1	164666037	164666038	chr1:164666038:C:T	rs2635036	C	T	C	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr1	164673756	164673757	chr1:164673757:G:A	rs116949572	G	A	G	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr1	164673764	164673765	chr1:164673765:T:C	rs117998226	T	C	T	Hoxd9.mouse_homeodomain_1	5	1	-	8.98901893988973	2.6148292216431743	CCCATAAAA
chr1	164682762	164682763	chr1:164682763:T:C	rs2800801	T	C	C	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr1	164691701	164691702	chr1:164691702:T:C	rs1780364	T	C	C	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr1	164784040	164784041	chr1:164784041:T:C	rs78920656	T	C	T	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr1	164784043	164784044	chr1:164784044:T:C	rs16834879	T	C	T	Hoxd9.mouse_homeodomain_1	6	1	-	8.027213970992095	1.3233880244003648	CACATAAAA
chr1	164913080	164913081	chr1:164913081:T:C	rs186491053	T	C	T	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr1	164953366	164953367	chr1:164953367:C:T	rs1936091	C	T	C	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr1	164962959	164962960	chr1:164962960:T:C	rs4576643	T	C	T	Hoxd9.mouse_homeodomain_1	7	1	-	8.027213970992095	1.3233880244003648	CACATAAAA
chr1	164962968	164962969	chr1:164962969:G:C	rs4261093	G	C	C	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr1	164983039	164983040	chr1:164983040:T:C	rs111373693	T	C	T	Hoxd9.mouse_homeodomain_1	6	1	-	7.091711387329735	0.38788544073800313	CCCATCAAA
chr1	165048712	165048713	chr1:165048713:G:A	rs186959016	G	A	G	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr1	165054748	165054749	chr1:165054749:T:C	rs1494416	T	C	C	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr1	165057107	165057108	chr1:165057108:G:A	rs6426892	G	A	G	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr1	165070016	165070017	chr1:165070017:C:T	rs13374947	C	T	C	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr1	165298692	165298693	chr1:165298693:A:G	rs10732283	A	G	G	Hoxd9.mouse_homeodomain_1	3	1	+	8.98901893988973	7.654940340027237	CCCATAAAA
chr1	165381853	165381854	chr1:165381854:C:A	rs1995661	C	A	A	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr1	165411385	165411386	chr1:165411386:G:A	rs10489744	G	A	A	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr1	165526886	165526887	chr1:165526887:A:G	rs72692041	A	G	A	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr1	165543878	165543879	chr1:165543879:T:C	rs191746	T	C	C	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr1	165630110	165630111	chr1:165630111:A:C	rs78552360	A	C	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.287463081002919	1.7119549767994378	CCAATAAAA
chr1	165634649	165634650	chr1:165634650:G:A	rs9333389	G	A	A	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr1	165634656	165634657	chr1:165634657:C:T	rs1538114	C	T	T	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr1	165649082	165649083	chr1:165649083:G:T	rs9333461	G	T	G	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr1	165683869	165683870	chr1:165683870:G:A	rs4646891	G	A	A	Hoxd9.mouse_homeodomain_1	0	1	+	7.716978748812629	6.928093714955487	GACATAAAA
chr1	165686866	165686867	chr1:165686867:C:T	rs7546215	C	T	C	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr1	165687187	165687188	chr1:165687188:C:A	rs747178944	C	A	C	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr1	166469693	166469694	chr1:166469694:C:T	rs1494425	C	T	T	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr1	166478465	166478466	chr1:166478466:C:T	rs1027352	C	T	C	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr1	166588961	166588962	chr1:166588962:T:C	rs144925564	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.287463081002919	6.953384481140425	CCAATAAAA
chr1	166905325	166905326	chr1:166905326:A:G	rs72705596	A	G	G	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr1	166976834	166976835	chr1:166976835:T:C	rs6699159	T	C	C	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr1	167071717	167071718	chr1:167071718:C:G	rs12567287	C	G	C	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr1	167120043	167120044	chr1:167120044:A:C	rs12062066	A	C	A	Hoxd9.mouse_homeodomain_1	7	1	+	7.091711387329735	4.202295617299148	CCCATCAAA
chr1	167451539	167451540	chr1:167451540:C:T	rs116403921	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	+	7.45645131454733	5.561904009238388	CCCATAAAC
chr1	167465039	167465040	chr1:167465040:T:C	rs2995091	T	C	T	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr1	167488814	167488815	chr1:167488815:G:A	rs57170836	G	A	G	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr1	167488829	167488830	chr1:167488830:T:C	rs858547	T	C	C	Hoxd9.mouse_homeodomain_1	1	1	-	7.716978748812629	2.2692504889278973	GACATAAAA
chr1	167530056	167530057	chr1:167530057:A:C	rs6699178	A	C	A	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr1	167530545	167530546	chr1:167530546:C:T	rs36019038	C	T	C	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr1	167663380	167663381	chr1:167663381:G:A	rs1229372	G	A	G	Hoxd9.mouse_homeodomain_1	1	1	-	7.212456609225008	5.897654694892	GCCATAAAG
chr1	167675673	167675674	chr1:167675674:G:A	rs7551114	G	A	G	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr1	167722817	167722818	chr1:167722818:A:G	rs147284960	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.287463081002919	6.953384481140425	CCAATAAAA
chr1	167736983	167736984	chr1:167736984:G:A	rs4656554	G	A	G	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr1	167792498	167792499	chr1:167792499:G:C	rs115541635	G	C	g	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr1	167792510	167792511	chr1:167792511:C:A	rs78652687	C	A	C	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr1	167792524	167792525	chr1:167792525:T:G	rs114790755	T	G	T	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr1	167862325	167862326	chr1:167862326:A:T	rs1521877	A	T	t	Hoxd9.mouse_homeodomain_1	6	1	+	8.287463081002919	5.398047310972334	CCAATAAAA
chr1	167907377	167907378	chr1:167907378:C:T	rs203777	C	T	t	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr1	167911769	167911770	chr1:167911770:G:A	rs11580404	G	A	g	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr1	168093584	168093585	chr1:168093585:C:G	rs145366815	C	G	C	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr1	168134306	168134307	chr1:168134307:A:G	rs4540637	A	G	G	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr1	168414799	168414800	chr1:168414800:G:A	rs16864952	G	A	G	Hoxd9.mouse_homeodomain_1	0	1	-	8.409487817756228	6.514940512447287	CCCATTAAA
chr1	168482449	168482450	chr1:168482450:G:A	rs6695565	G	A	A	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr1	168482485	168482486	chr1:168482486:T:C	rs61801301	T	C	T	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr1	168774713	168774714	chr1:168774714:A:G	rs2223479	A	G	G	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr1	168894649	168894650	chr1:168894650:A:G	rs74123028	A	G	G	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr1	168947200	168947201	chr1:168947201:C:T	rs61302106	C	T	C	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr1	169309471	169309472	chr1:169309472:A:C	rs139954582	A	C	A	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr1	169539198	169539199	chr1:169539199:C:T	rs75548771	C	T	C	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr1	169539337	169539338	chr1:169539338:A:C	rs1557572	A	C	C	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr1	169570044	169570045	chr1:169570045:G:A	rs9332542	G	A	A	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr1	169999303	169999304	chr1:169999304:T:C	rs74767340	T	C	T	Hoxd9.mouse_homeodomain_1	4	1	+	7.1462160923678635	4.491169447505284	GCCATAAAC
chr1	170146900	170146901	chr1:170146901:C:T	rs579438	C	T	C	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr1	170378060	170378061	chr1:170378061:A:G	rs824840	A	G	A	Hoxd9.mouse_homeodomain_1	8	1	+	8.409487817756228	6.943160709270972	CCCATTAAA
chr1	170415872	170415873	chr1:170415873:T:C	rs78593807	T	C	T	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr1	170511389	170511390	chr1:170511390:C:T	rs10919423	C	T	C	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr1	170565513	170565514	chr1:170565514:T:G	rs6661527	T	G	t	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr1	170623243	170623244	chr1:170623244:C:T	rs502479	C	T	C	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr1	170726293	170726294	chr1:170726294:C:G	rs750047066	C	G	C	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr1	170861828	170861829	chr1:170861829:G:C	rs10489234	G	C	G	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr1	171139696	171139697	chr1:171139697:C:T	rs2235193	C	T	T	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr1	171723170	171723171	chr1:171723171:C:T	rs6669263	C	T	C	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr1	171743009	171743010	chr1:171743010:A:G	rs10913576	A	G	A	Hoxd9.mouse_homeodomain_1	7	1	+	7.716978748812629	1.0131528022208975	GACATAAAA
chr1	171780954	171780955	chr1:171780955:T:C	rs2232807	T	C	T	Hoxd9.mouse_homeodomain_1	4	1	+	8.027213970992095	5.372167326129518	CACATAAAA
chr1	171780954	171780955	chr1:171780955:T:G	chr1:171780955:T:G	T	G	T	Hoxd9.mouse_homeodomain_1	4	1	+	8.027213970992095	1.1853955236614904	CACATAAAA
chr1	172246869	172246870	chr1:172246870:T:C	rs16844133	T	C	T	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr1	172278379	172278380	chr1:172278380:C:T	rs147472181	C	T	C	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr1	172537387	172537388	chr1:172537388:A:G	rs74801057	A	G	A	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr1	172883772	172883773	chr1:172883773:A:G	rs6672265	A	G	G	Hoxd9.mouse_homeodomain_1	8	1	+	8.287463081002919	6.821135972517665	CCAATAAAA
chr1	173139255	173139256	chr1:173139256:C:T	rs1234310	C	T	T	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr1	173404312	173404313	chr1:173404313:C:A	rs10798277	C	A	C	Hoxd9.mouse_homeodomain_1	0	1	+	8.027213970992095	6.928093714955487	CACATAAAA
chr1	173518784	173518785	chr1:173518785:G:T	rs12080722	G	T	T	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr1	173539976	173539977	chr1:173539977:C:A	rs555119360	C	A	C	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr1	173717213	173717214	chr1:173717214:A:G	rs6413827	A	G	G	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr1	174071265	174071266	chr1:174071266:A:G	rs185432243	A	G	A	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr1	174114329	174114330	chr1:174114330:G:T	rs17350991	G	T	G	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr1	174134241	174134242	chr1:174134242:A:G	rs76016955	A	G	A	Hoxd9.mouse_homeodomain_1	6	1	+	7.889898683853121	1.18607273726139	ACCATAAAA
chr1	174134263	174134264	chr1:174134264:G:A	rs4650950	G	A	G	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr1	174217857	174217858	chr1:174217858:C:T	rs139520689	C	T	C	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr1	174217882	174217883	chr1:174217883:A:G	rs55773127	A	G	A	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr1	174272156	174272157	chr1:174272157:A:G	rs139552991	A	G	A	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr1	174407832	174407833	chr1:174407833:T:C	rs79039367	T	C	T	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr1	174497578	174497579	chr1:174497579:A:G	rs74126815	A	G	A	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr1	174639549	174639550	chr1:174639550:T:C	rs6689153	T	C	T	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr1	174641319	174641320	chr1:174641320:C:T	rs2760058	C	T	C	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr1	175169465	175169466	chr1:175169466:G:A	rs10912901	G	A	G	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr1	175220433	175220434	chr1:175220434:G:A	rs11804813	G	A	G	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr1	175270671	175270672	chr1:175270672:T:C	rs11801549	T	C	T	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr1	175319718	175319719	chr1:175319719:C:G	rs181909502	C	G	C	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr1	175389862	175389863	chr1:175389863:G:T	rs704814	G	T	T	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr1	175573643	175573644	chr1:175573644:A:C	rs1364950115	A	C	A	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr1	175658258	175658259	chr1:175658259:C:T	rs2057453	C	T	C	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr1	175674122	175674123	chr1:175674123:C:T	rs484813	C	T	T	Hoxd9.mouse_homeodomain_1	0	1	+	8.409487817756228	6.514940512447287	CCCATTAAA
chr1	175788682	175788683	chr1:175788683:A:G	rs1359589	A	G	G	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr1	175788692	175788693	chr1:175788693:T:C	rs538303386	T	C	T	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr1	175854287	175854288	chr1:175854288:C:A	rs511539	C	A	C	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr1	175861828	175861829	chr1:175861829:T:A	rs7543556	T	A	T	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr1	176195728	176195729	chr1:176195729:T:C	rs12755507	T	C	T	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr1	176205654	176205655	chr1:176205655:T:C	rs2039230	T	C	C	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr1	176483760	176483761	chr1:176483761:A:T	rs4652180	A	T	A	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr1	176593659	176593660	chr1:176593660:G:A	rs1395460	G	A	A	Hoxd9.mouse_homeodomain_1	8	1	-	7.45645131454733	6.056505815123662	CCCATAAAC
chr1	176898261	176898262	chr1:176898262:C:T	rs16850339	C	T	C	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr1	176931701	176931702	chr1:176931702:T:C	rs17379085	T	C	T	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr1	176976486	176976487	chr1:176976487:T:C	rs227992	T	C	C	Hoxd9.mouse_homeodomain_1	4	1	+	7.241935125048919	4.5868884801863405	CCCATACAA
chr1	177567745	177567746	chr1:177567746:T:C	rs1890033	T	C	C	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr1	177597523	177597524	chr1:177597524:A:C	rs1890035	A	C	C	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr1	177944383	177944384	chr1:177944384:T:C	rs10913469	T	C	C	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr1	177986557	177986558	chr1:177986558:C:A	rs116216811	C	A	C	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr1	178023266	178023267	chr1:178023267:T:C	rs11585914	T	C	T	Hoxd9.mouse_homeodomain_1	7	1	-	8.099252595576761	1.3954266489850298	GCCATTAAA
chr1	178262544	178262545	chr1:178262545:A:G	rs115754055	A	G	A	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr1	178399044	178399045	chr1:178399045:A:G	rs2048333	A	G	A	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr1	178455996	178455997	chr1:178455997:A:G	rs387933	A	G	G	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr1	178613484	178613485	chr1:178613485:G:C	rs12726107	G	C	G	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr1	178706156	178706157	chr1:178706157:T:G	rs34709968	T	G	T	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr1	178939702	178939703	chr1:178939703:A:G	rs7538382	A	G	A	Hoxd9.mouse_homeodomain_1	4	1	-	7.091711387329735	4.436664742467157	CCCATCAAA
chr1	179038141	179038142	chr1:179038142:C:T	rs34636548	C	T	C	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr1	179143177	179143178	chr1:179143178:A:G	rs79732318	A	G	A	Hoxd9.mouse_homeodomain_1	8	1	+	8.287463081002919	6.821135972517665	CCAATAAAA
chr1	179323306	179323307	chr1:179323307:G:A	rs2902277	G	A	A	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr1	179416882	179416883	chr1:179416883:T:C	rs11808254	T	C	C	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr1	179645395	179645396	chr1:179645396:C:T	rs10913847	C	T	T	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr1	179690189	179690190	chr1:179690190:T:G	rs12139382	T	G	T	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr1	180113133	180113134	chr1:180113134:G:C	rs1801795	G	C	g	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr1	180169338	180169339	chr1:180169339:G:A	rs12071932	G	A	G	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr1	180801107	180801108	chr1:180801108:T:C	rs11585146	T	C	T	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr1	180922273	180922274	chr1:180922274:T:C	rs12753478	T	C	T	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr1	181218821	181218822	chr1:181218822:A:C	rs7538551	A	C	C	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr1	182066243	182066244	chr1:182066244:T:C	rs10911010	T	C	T	Hoxd9.mouse_homeodomain_1	8	1	-	7.091711387329735	5.6253842788444794	CCCATCAAA
chr1	182303853	182303854	chr1:182303854:C:T	rs2494449	C	T	C	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr1	182332770	182332771	chr1:182332771:C:A	rs10436859	C	A	C	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr1	182394487	182394488	chr1:182394488:G:A	rs7549498	G	A	G	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr1	182632095	182632096	chr1:182632096:A:G	rs6679061	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.027213970992095	6.693135371129603	CACATAAAA
chr1	182633188	182633189	chr1:182633189:T:C	rs658032	T	C	T	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr1	182845147	182845148	chr1:182845148:T:C	rs6674915	T	C	C	Hoxd9.mouse_homeodomain_1	5	1	-	8.287463081002919	1.9132733627563638	CCAATAAAA
chr1	182969154	182969155	chr1:182969155:A:G	rs6664558	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	7.091711387329735	5.757632787467242	CCCATCAAA
chr1	183020230	183020231	chr1:183020231:C:T	rs10797813	C	T	C	Hoxd9.mouse_homeodomain_1	2	1	+	7.241935125048919	0.7544946674252814	CCCATACAA
chr1	183022219	183022220	chr1:183022220:T:C	rs6695746	T	C	C	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr1	183164381	183164382	chr1:183164382:T:C	rs1276378415	T	C	T	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr1	183209622	183209623	chr1:183209623:C:T	rs185644154	C	T	C	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr1	183235341	183235342	chr1:183235342:G:A	rs2296302	G	A	A	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr1	183339965	183339966	chr1:183339966:A:T	rs1536984	A	T	A	Hoxd9.mouse_homeodomain_1	5	1	+	8.027213970992095	7.447682848858594	CACATAAAA
chr1	183509159	183509160	chr1:183509160:A:G	rs73054012	A	G	A	Hoxd9.mouse_homeodomain_1	8	1	+	8.287463081002919	6.821135972517665	CCAATAAAA
chr1	183571962	183571963	chr1:183571963:C:T	rs6667363	C	T	C	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr1	183591056	183591057	chr1:183591057:C:T	rs4987080	C	T	C	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr1	183591060	183591061	chr1:183591061:C:T	rs4987079	C	T	C	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr1	183689831	183689832	chr1:183689832:C:T	rs191255444	C	T	C	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr1	183694148	183694149	chr1:183694149:A:G	rs77404665	A	G	A	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr1	183694167	183694168	chr1:183694168:C:G	rs10797901	C	G	C	Hoxd9.mouse_homeodomain_1	0	1	-	7.716978748812629	8.027213970992095	GACATAAAA
chr1	183700227	183700228	chr1:183700228:T:C	rs74622254	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.98901893988973	7.654940340027237	CCCATAAAA
chr1	183700244	183700245	chr1:183700245:T:C	rs12133984	T	C	C	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr1	183734778	183734779	chr1:183734779:A:G	rs145593548	A	G	C	Hoxd9.mouse_homeodomain_1	2	1	+	7.9772278588234515	5.2107920602579325	GCAATAAAA
chr1	183778382	183778383	chr1:183778383:A:G	rs78151551	A	G	A	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr1	184144110	184144111	chr1:184144111:T:C	rs732812	T	C	C	Hoxd9.mouse_homeodomain_1	6	1	-	7.522691831404475	0.8188658848127437	CCCATAAAG
chr1	184358121	184358122	chr1:184358122:C:T	rs10911580	C	T	C	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr1	184419456	184419457	chr1:184419457:T:C	rs74131668	T	C	T	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr1	184541663	184541664	chr1:184541664:C:T	rs4651218	C	T	T	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr1	184776433	184776434	chr1:184776434:A:G	rs861602	A	G	G	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr1	184809958	184809959	chr1:184809959:G:A	rs338571	G	A	A	Hoxd9.mouse_homeodomain_1	2	1	-	8.027213970992095	1.5397735133684596	CACATAAAA
chr1	184844127	184844128	chr1:184844128:A:G	rs685595	A	G	G	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr1	184910677	184910678	chr1:184910678:T:C	rs76128442	T	C	T	Hoxd9.mouse_homeodomain_1	1	1	-	8.027213970992095	2.5794857111073646	CACATAAAA
chr1	184910694	184910695	chr1:184910695:G:A	rs234671	G	A	G	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr1	184930626	184930627	chr1:184930627:C:A	rs7524825	C	A	A	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr1	185343376	185343377	chr1:185343377:T:A	rs79748080	T	A	T	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr1	185437247	185437248	chr1:185437248:G:A	rs10911730	G	A	G	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr1	185441709	185441710	chr1:185441710:T:C	rs574894191	T	C	T	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr1	185441713	185441714	chr1:185441714:T:C	rs74132491	T	C	T	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr1	185566794	185566795	chr1:185566795:C:G	rs2756205	C	G	C	Hoxd9.mouse_homeodomain_1	0	1	+	8.409487817756228	8.099252595576761	CCCATTAAA
chr1	185608633	185608634	chr1:185608634:A:G	rs146296919	A	G	A	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr1	185688113	185688114	chr1:185688114:C:A	rs58044515	C	A	C	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr1	186213002	186213003	chr1:186213003:T:C	chr1:186213003:T:C	T	C	T	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr1	186213023	186213024	chr1:186213024:T:C	rs6666859	T	C	T	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr1	186220442	186220443	chr1:186220443:G:A	rs61831096	G	A	G	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr1	186220650	186220651	chr1:186220651:T:C	rs61831097	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.409487817756228	7.075409217893736	CCCATTAAA
chr1	186568718	186568719	chr1:186568719:G:A	rs10911887	G	A	A	Hoxd9.mouse_homeodomain_1	1	1	-	8.287463081002919	6.972661166669912	CCAATAAAA
chr1	186632008	186632009	chr1:186632009:G:A	rs11811047	G	A	G	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr1	186682743	186682744	chr1:186682744:G:T	rs12042763	G	T	G	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr1	186864496	186864497	chr1:186864497:T:C	rs77191125	T	C	T	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr1	186943922	186943923	chr1:186943923:T:G	rs6668908	T	G	G	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr1	187224018	187224019	chr1:187224019:G:C	rs55657357	G	C	G	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr1	187688701	187688702	chr1:187688702:G:A	rs192327823	G	A	G	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr1	187688733	187688734	chr1:187688734:G:A	rs3127495	G	A	G	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr1	188043404	188043405	chr1:188043405:G:A	rs1368172	G	A	G	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr1	188090515	188090516	chr1:188090516:A:G	rs115794091	A	G	A	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr1	188665684	188665685	chr1:188665685:C:A	rs115212619	C	A	c	Hoxd9.mouse_homeodomain_1	1	1	+	8.98901893988973	8.027213970992095	CCCATAAAA
chr1	189312588	189312589	chr1:189312589:G:T	rs951601	G	T	G	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr1	189345658	189345659	chr1:189345659:G:A	rs10921842	G	A	A	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr1	190243418	190243419	chr1:190243419:T:G	rs192450961	T	G	T	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr1	190453749	190453750	chr1:190453750:A:G	chr1:190453750:A:G	A	G	A	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr1	190453913	190453914	chr1:190453914:G:A	rs1171033	G	A	A	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr1	190476160	190476161	chr1:190476161:G:A	rs966785785	G	A	G	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr1	190597539	190597540	chr1:190597540:C:T	rs12402698	C	T	C	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr1	190686189	190686190	chr1:190686190:C:T	rs10920773	C	T	C	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr1	191306644	191306645	chr1:191306645:T:C	rs2095277	T	C	T	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr1	191346287	191346288	chr1:191346288:C:T	rs1246720	C	T	T	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr1	191561496	191561497	chr1:191561497:C:T	rs12568770	C	T	C	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr1	191615336	191615337	chr1:191615337:T:G	rs12741522	T	G	T	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr1	191831865	191831866	chr1:191831866:C:A	rs181569755	C	A	C	Hoxd9.mouse_homeodomain_1	1	1	+	6.943160709270972	5.981355740373339	CCCATTAAG
chr1	191970291	191970292	chr1:191970292:C:T	rs184202442	C	T	C	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr1	192151873	192151874	chr1:192151874:G:A	rs4077239	G	A	G	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr1	192575968	192575969	chr1:192575969:G:A	rs7535818	G	A	G	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr1	192575979	192575980	chr1:192575980:T:C	rs80272816	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.099252595576761	6.765173995714267	GCCATTAAA
chr1	192600673	192600674	chr1:192600674:A:G	rs12062810	A	G	A	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr1	192600691	192600692	chr1:192600692:G:A	rs12067683	G	A	A	Hoxd9.mouse_homeodomain_1	1	1	-	7.889898683853121	6.575096769520114	ACCATAAAA
chr1	192615350	192615351	chr1:192615351:T:C	rs10429907	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.716978748812629	6.382900148950135	GACATAAAA
chr1	192724865	192724866	chr1:192724866:C:A	chr1:192724866:C:A	C	A	C	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr1	193186518	193186519	chr1:193186519:A:G	rs16835199	A	G	A	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr1	193186524	193186525	chr1:193186525:G:A	rs72722414	G	A	G	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr1	193487461	193487462	chr1:193487462:T:A	rs4146990	T	A	T	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr1	193819940	193819941	chr1:193819941:A:C	rs2887798	A	C	C	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr1	193819956	193819957	chr1:193819957:A:G	rs12140410	A	G	A	Hoxd9.mouse_homeodomain_1	4	1	-	8.027213970992095	5.372167326129518	CACATAAAA
chr1	194052935	194052936	chr1:194052936:A:C	rs4657901	A	C	A	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr1	194052938	194052939	chr1:194052939:T:C	rs74131282	T	C	T	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr1	194411018	194411019	chr1:194411019:C:T	rs6702683	C	T	T	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr1	194420275	194420276	chr1:194420276:A:G	rs10921572	A	G	A	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr1	194821090	194821091	chr1:194821091:T:C	rs117289115	T	C	T	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr1	194832172	194832173	chr1:194832173:T:C	rs139106295	T	C	T	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr1	194978118	194978119	chr1:194978119:C:T	rs12037113	C	T	C	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr1	195115333	195115334	chr1:195115334:A:T	rs10921789	A	T	A	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr1	195115363	195115364	chr1:195115364:A:G	rs10921790	A	G	G	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr1	195754353	195754354	chr1:195754354:T:C	rs12067574	T	C	T	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr1	196098470	196098471	chr1:196098471:G:A	rs1253571898	G	A	G	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr1	196404562	196404563	chr1:196404563:C:T	rs191653201	C	T	C	Hoxd9.mouse_homeodomain_1	8	1	-	7.522691831404475	8.98901893988973	CCCATAAAG
chr1	196898102	196898103	chr1:196898103:T:C	rs6685931	T	C	T	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr1	196973490	196973491	chr1:196973491:C:T	rs13376702	C	T	T	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr1	197269718	197269719	chr1:197269719:C:G	rs489839	C	G	G	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr1	197273802	197273803	chr1:197273803:G:C	rs7530522	G	C	G	Hoxd9.mouse_homeodomain_1	1	1	-	7.212456609225008	0.8029233804426421	GCCATAAAG
chr1	197360404	197360405	chr1:197360405:A:C	rs2786119	A	C	C	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr1	197404580	197404581	chr1:197404581:A:G	rs75669701	A	G	A	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr1	197556928	197556929	chr1:197556929:A:C	rs368129638	A	C	A	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr1	197923121	197923122	chr1:197923122:C:A	rs12029707	C	A	C	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr1	198079573	198079574	chr1:198079574:A:G	rs72749406	A	G	A	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr1	198234474	198234475	chr1:198234475:T:C	rs7522204	T	C	C	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr1	198498851	198498852	chr1:198498852:C:T	rs56117357	C	T	C	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr1	198517690	198517691	chr1:198517691:C:A	rs2813165	C	A	A	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr1	198621290	198621291	chr1:198621291:C:T	rs16843471	C	T	T	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr1	198657901	198657902	chr1:198657902:G:A	rs10922469	G	A	G	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr1	198933550	198933551	chr1:198933551:A:G	rs192900469	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	7.716978748812629	6.382900148950135	GACATAAAA
chr1	199095256	199095257	chr1:199095257:A:G	rs167735	A	G	G	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr1	199279532	199279533	chr1:199279533:A:G	rs10919655	A	G	A	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr1	199465408	199465409	chr1:199465409:C:T	rs1327069	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	-	7.212456609225008	6.423571575367866	GCCATAAAG
chr1	199482368	199482369	chr1:199482369:T:C	rs114116060	T	C	T	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr1	199665469	199665470	chr1:199665470:G:A	rs10919736	G	A	A	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr1	199781352	199781353	chr1:199781353:T:C	rs145045082	T	C	T	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr1	199821573	199821574	chr1:199821574:T:C	rs9661058	T	C	T	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr1	199878224	199878225	chr1:199878225:T:G	rs16845646	T	G	T	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr1	199922426	199922427	chr1:199922427:G:A	rs34777525	G	A	G	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr1	199977664	199977665	chr1:199977665:T:C	rs72737489	T	C	C	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr1	200726928	200726929	chr1:200726929:C:T	rs114846561	C	T	C	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr1	200741189	200741190	chr1:200741190:G:C	rs7520984	G	C	C	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr1	200771948	200771949	chr1:200771949:C:T	rs10800733	C	T	C	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr1	200936743	200936744	chr1:200936744:T:A	rs167199	T	A	T	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr1	200936758	200936759	chr1:200936759:A:G	rs7525822	A	G	A	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr1	200955880	200955881	chr1:200955881:C:T	rs6694184	C	T	C	Hoxd9.mouse_homeodomain_1	2	1	+	7.075409217893736	0.5879687602700975	CCCGTTAAA
chr1	201028698	201028699	chr1:201028699:C:T	rs764678812	C	T	C	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr1	201127639	201127640	chr1:201127640:T:C	rs11810647	T	C	T	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr1	201149648	201149649	chr1:201149649:G:T	rs80209962	G	T	G	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr1	201228038	201228039	chr1:201228039:A:T	rs184961497	A	T	A	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr1	201319386	201319387	chr1:201319387:G:T	rs1794870	G	T	G	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr1	201594537	201594538	chr1:201594538:A:G	rs484034	A	G	G	Hoxd9.mouse_homeodomain_1	5	1	+	7.45645131454733	1.0822615963007745	CCCATAAAC
chr1	201719826	201719827	chr1:201719827:A:G	rs67146338	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.287463081002919	6.953384481140425	CCAATAAAA
chr1	201721834	201721835	chr1:201721835:C:T	rs551359924	C	T	C	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr1	201742830	201742831	chr1:201742831:G:A	rs239985	G	A	A	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr1	202129686	202129687	chr1:202129687:T:C	rs190657896	T	C	T	Hoxd9.mouse_homeodomain_1	8	1	-	8.678783717710262	7.212456609225008	GCCATAAAA
chr1	202297478	202297479	chr1:202297479:C:T	rs788826	C	T	T	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr1	202586506	202586507	chr1:202586507:A:G	rs144289708	A	G	A	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr1	202919818	202919819	chr1:202919819:T:C	rs3182429	T	C	T	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr1	202923788	202923789	chr1:202923789:T:C	rs10800880	T	C	T	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr1	202957692	202957693	chr1:202957693:G:A	rs150054242	G	A	G	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr1	203062642	203062643	chr1:203062643:T:C	rs112656610	T	C	t	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr1	203186753	203186754	chr1:203186754:G:C	rs4950928	G	C	C	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr1	203186756	203186757	chr1:203186757:G:A	rs140304796	G	A	G	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr1	203556499	203556500	chr1:203556500:A:G	chr1:203556500:A:G	A	G	A	Hoxd9.mouse_homeodomain_1	5	1	-	8.409487817756228	7.091711387329735	CCCATTAAA
chr1	203625796	203625797	chr1:203625797:A:G	rs1042665143	A	G	A	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr1	203656166	203656167	chr1:203656167:C:T	rs75027952	C	T	C	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr1	203870372	203870373	chr1:203870373:A:C	rs2298871	A	C	A	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr1	203870386	203870387	chr1:203870387:A:G	rs75335430	A	G	A	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr1	203999706	203999707	chr1:203999707:G:C	rs7535199	G	C	G	Hoxd9.mouse_homeodomain_1	0	1	-	8.027213970992095	7.716978748812629	CACATAAAA
chr1	204273709	204273710	chr1:204273710:A:C	rs33911350	A	C	A	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr1	204297698	204297699	chr1:204297699:C:A	chr1:204297699:C:A	C	A	C	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr1	204322633	204322634	chr1:204322634:G:A	rs6703594	G	A	A	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr1	204322654	204322655	chr1:204322655:G:C	rs6703598	G	C	G	Hoxd9.mouse_homeodomain_1	1	1	-	6.943160709270972	0.5336274804886076	CCCATTAAG
chr1	204555345	204555346	chr1:204555346:G:T	rs12116645	G	T	G	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr1	204630166	204630167	chr1:204630167:G:A	rs7551222	G	A	A	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr1	204630196	204630197	chr1:204630197:C:T	rs7531829	C	T	T	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr1	204659154	204659155	chr1:204659155:A:G	rs138322429	A	G	A	Hoxd9.mouse_homeodomain_1	4	1	-	8.98901893988973	6.333972295027152	CCCATAAAA
chr1	204713108	204713109	chr1:204713109:C:T	rs944080	C	T	C	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr1	204713138	204713139	chr1:204713139:A:C	rs868507	A	C	C	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr1	204909398	204909399	chr1:204909399:A:G	rs7552321	A	G	A	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr1	205001366	205001367	chr1:205001367:C:A	rs4951152	C	A	A	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr1	205180461	205180462	chr1:205180462:C:T	rs10900460	C	T	C	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr1	205193928	205193929	chr1:205193929:A:G	rs10900468	A	G	A	Hoxd9.mouse_homeodomain_1	8	1	+	8.678783717710262	7.212456609225008	GCCATAAAA
chr1	205352009	205352010	chr1:205352010:G:C	rs11589742	G	C	G	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr1	205369554	205369555	chr1:205369555:G:T	rs6658079	G	T	T	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr1	205711514	205711515	chr1:205711515:A:C	rs1387576622	A	C	A	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr1	206003651	206003652	chr1:206003652:C:A	rs1052334669	C	A	A	Hoxd9.mouse_homeodomain_1	0	1	+	7.522691831404475	6.423571575367866	CCCATAAAG
chr1	206420115	206420116	chr1:206420116:G:A	rs66887912	G	A	G	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr1	206422212	206422213	chr1:206422213:A:C	rs12098229	A	C	C	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr1	206562362	206562363	chr1:206562363:C:G	rs1007802	C	G	G	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr1	206693425	206693426	chr1:206693426:C:T	rs146131528	C	T	C	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr1	206804591	206804592	chr1:206804592:T:C	rs11119597	T	C	C	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr1	206865340	206865341	chr1:206865341:C:T	rs1400986	C	T	C	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr1	207220378	207220379	chr1:207220379:T:G	rs10746451	T	G	T	Hoxd9.mouse_homeodomain_1	7	1	-	7.1462160923678635	4.256800322337277	GCCATAAAC
chr1	207287115	207287116	chr1:207287116:A:G	rs75180434	A	G	A	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr1	207364736	207364737	chr1:207364737:T:C	rs148281575	T	C	T	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr1	207405218	207405219	chr1:207405219:C:T	rs56310041	C	T	C	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr1	207499642	207499643	chr1:207499643:G:C	rs59179545	G	C	G	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr1	207579204	207579205	chr1:207579205:T:G	rs601356	T	G	g	Hoxd9.mouse_homeodomain_1	3	1	-	8.099252595576761	1.5237444913732796	GCCATTAAA
chr1	207863630	207863631	chr1:207863631:C:T	rs2796247	C	T	C	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr1	207931642	207931643	chr1:207931643:T:C	rs11118935	T	C	T	Hoxd9.mouse_homeodomain_1	5	1	-	8.98901893988973	2.6148292216431743	CCCATAAAA
chr1	207955786	207955787	chr1:207955787:T:C	rs35149591	T	C	T	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr1	208272454	208272455	chr1:208272455:C:T	rs2590691	C	T	C	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr1	208388007	208388008	chr1:208388008:T:C	rs2163039	T	C	T	Hoxd9.mouse_homeodomain_1	2	1	-	7.9772278588234515	5.2107920602579325	GCAATAAAA
chr1	208404854	208404855	chr1:208404855:G:A	rs710417	G	A	G	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr1	208571463	208571464	chr1:208571464:A:C	rs75593891	A	C	A	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr1	208908131	208908132	chr1:208908132:A:G	rs1933556	A	G	A	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr1	208908139	208908140	chr1:208908140:T:C	rs12566014	T	C	t	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr1	208985737	208985738	chr1:208985738:C:T	rs4844454	C	T	C	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr1	209040338	209040339	chr1:209040339:G:A	rs908234307	G	A	G	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr1	209154913	209154914	chr1:209154914:C:T	rs56152832	C	T	C	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr1	209387328	209387329	chr1:209387329:A:T	rs184822094	A	T	A	Hoxd9.mouse_homeodomain_1	6	1	+	8.099252595576761	5.209836825546175	GCCATTAAA
chr1	209431190	209431191	chr1:209431191:T:C	rs79906026	T	C	T	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr1	209434375	209434376	chr1:209434376:A:G	rs2356929	A	G	G	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr1	209473013	209473014	chr1:209473014:T:C	rs2206115	T	C	C	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr1	209548815	209548816	chr1:209548816:C:T	rs10436972	C	T	T	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr1	209548839	209548840	chr1:209548840:A:G	rs60843894	A	G	A	Hoxd9.mouse_homeodomain_1	8	1	+	8.287463081002919	6.821135972517665	CCAATAAAA
chr1	209827702	209827703	chr1:209827703:A:C	rs660975	A	C	A	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr1	209855215	209855216	chr1:209855216:C:G	rs75554535	C	G	C	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr1	210062055	210062056	chr1:210062056:A:G	rs1257481686	A	G	A	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr1	210223446	210223447	chr1:210223447:G:A	rs74156109	G	A	G	Hoxd9.mouse_homeodomain_1	2	1	-	8.099252595576761	1.6118121379531245	GCCATTAAA
chr1	210246510	210246511	chr1:210246511:C:G	rs656312	C	G	G	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr1	210343276	210343277	chr1:210343277:T:C	rs184744728	T	C	T	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr1	210647825	210647826	chr1:210647826:C:A	rs114550224	C	A	C	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr1	210765874	210765875	chr1:210765875:G:A	rs12142954	G	A	G	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr1	210801173	210801174	chr1:210801174:G:A	rs12122589	G	A	G	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr1	210908060	210908061	chr1:210908061:A:G	rs6656271	A	G	A	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr1	211210110	211210111	chr1:211210111:T:C	rs67437198	T	C	T	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr1	211481688	211481689	chr1:211481689:C:T	rs71239017	C	T	C	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr1	211650911	211650912	chr1:211650912:C:T	rs55661489	C	T	C	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr1	211655611	211655612	chr1:211655612:C:A	rs79657581	C	A	C	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr1	211831424	211831425	chr1:211831425:C:T	chr1:211831425:C:T	C	T	C	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr1	212107958	212107959	chr1:212107959:A:G	rs114037737	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.287463081002919	6.953384481140425	CCAATAAAA
chr1	212201587	212201588	chr1:212201588:A:G	rs4951578	A	G	G	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr1	212201993	212201994	chr1:212201994:G:A	rs1967114	G	A	G	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr1	212248286	212248287	chr1:212248287:A:G	rs351385	A	G	G	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr1	212507468	212507469	chr1:212507469:C:T	rs76040337	C	T	C	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr1	212529380	212529381	chr1:212529381:G:C	rs6659881	G	C	C	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr1	212592114	212592115	chr1:212592115:A:G	rs10863982	A	G	A	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr1	212597051	212597052	chr1:212597052:A:T	rs3125295	A	T	T	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr1	212640619	212640620	chr1:212640620:A:G	rs1238046890	A	G	A	Hoxd9.mouse_homeodomain_1	5	1	+	7.522691831404475	1.1485021131579192	CCCATAAAG
chr1	212649002	212649003	chr1:212649003:A:T	rs3122716	A	T	A	Hoxd9.mouse_homeodomain_1	8	1	+	8.027213970992095	5.094700846226028	CACATAAAA
chr1	212655113	212655114	chr1:212655114:A:G	rs17019532	A	G	G	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr1	212792089	212792090	chr1:212792090:C:T	rs141571022	C	T	C	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr1	212792126	212792127	chr1:212792127:C:T	rs3738798	C	T	C	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr1	212823082	212823083	chr1:212823083:T:G	rs10864001	T	G	T	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr1	213484365	213484366	chr1:213484366:C:T	rs73082995	C	T	C	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr1	213513021	213513022	chr1:213513022:T:C	rs542558982	T	C	T	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr1	213583111	213583112	chr1:213583112:G:A	rs12060988	G	A	G	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr1	213670053	213670054	chr1:213670054:T:C	rs1509880	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.98901893988973	7.654940340027237	CCCATAAAA
chr1	214030170	214030171	chr1:214030171:G:A	rs115557097	G	A	G	Hoxd9.mouse_homeodomain_1	1	1	-	7.9772278588234515	6.662425944490444	GCAATAAAA
chr1	214271527	214271528	chr1:214271528:T:C	rs868222727	T	C	T	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr1	214272568	214272569	chr1:214272569:A:T	rs7517180	A	T	A	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr1	214351972	214351973	chr1:214351973:A:C	rs1472440	A	C	A	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr1	214392154	214392155	chr1:214392155:C:A	rs558088409	C	A	C	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr1	214456296	214456297	chr1:214456297:T:C	rs6667098	T	C	C	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr1	214456297	214456298	chr1:214456298:G:A	rs12736454	G	A	G	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr1	214488503	214488504	chr1:214488504:C:T	rs61819645	C	T	C	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr1	214584242	214584243	chr1:214584243:C:T	rs897548788	C	T	C	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr1	214801433	214801434	chr1:214801434:T:C	rs2167219	T	C	C	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr1	214857840	214857841	chr1:214857841:C:T	rs78099653	C	T	C	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr1	215147116	215147117	chr1:215147117:A:G	rs2363557	A	G	G	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr1	215417164	215417165	chr1:215417165:G:C	rs7530039	G	C	C	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr1	215819065	215819066	chr1:215819066:A:G	rs10495006	A	G	A	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr1	216603649	216603650	chr1:216603650:C:T	rs116703824	C	T	C	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr1	216617272	216617273	chr1:216617273:T:C	rs560326634	T	C	T	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr1	216710535	216710536	chr1:216710536:T:C	rs531358487	T	C	T	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr1	216883550	216883551	chr1:216883551:T:C	rs11117715	T	C	T	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr1	216914512	216914513	chr1:216914513:G:A	rs373134252	G	A	G	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr1	216941031	216941032	chr1:216941032:C:G	rs2576271	C	G	G	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr1	216971796	216971797	chr1:216971797:C:A	rs17044587	C	A	C	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr1	217063552	217063553	chr1:217063553:T:G	rs1416526	T	G	T	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr1	217141119	217141120	chr1:217141120:A:G	rs75467461	A	G	A	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr1	217275450	217275451	chr1:217275451:C:T	rs1044539088	C	T	C	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr1	217349080	217349081	chr1:217349081:C:T	rs145194081	C	T	C	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr1	217631589	217631590	chr1:217631590:A:G	rs113425013	A	G	A	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr1	217867931	217867932	chr1:217867932:G:A	chr1:217867932:G:A	G	A	G	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr1	217867957	217867958	chr1:217867958:G:T	rs12060475	G	T	G	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr1	218049214	218049215	chr1:218049215:T:C	chr1:218049215:T:C	T	C	T	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr1	218049245	218049246	chr1:218049246:T:C	rs12046631	T	C	T	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr1	218139977	218139978	chr1:218139978:T:C	rs61824612	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.287463081002919	6.953384481140425	CCAATAAAA
chr1	218492948	218492949	chr1:218492949:G:A	rs144851321	G	A	G	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr1	218498193	218498194	chr1:218498194:T:G	rs116462480	T	G	T	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr1	218667968	218667969	chr1:218667969:A:G	rs28646156	A	G	G	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr1	218778795	218778796	chr1:218778796:G:A	rs2378015	G	A	G	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr1	218809674	218809675	chr1:218809675:A:G	rs114359428	A	G	A	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr1	218859138	218859139	chr1:218859139:C:G	rs7553911	C	G	C	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr1	218868618	218868619	chr1:218868619:G:A	rs17515718	G	A	G	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr1	218931251	218931252	chr1:218931252:G:C	chr1:218931252:G:C	G	C	G	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr1	218969262	218969263	chr1:218969263:A:C	rs12569212	A	C	A	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr1	219067627	219067628	chr1:219067628:A:G	rs1256603	A	G	G	Hoxd9.mouse_homeodomain_1	7	1	+	8.678783717710262	1.9749577711185315	GCCATAAAA
chr1	219089996	219089997	chr1:219089997:C:T	rs1256628	C	T	T	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr1	219265318	219265319	chr1:219265319:G:C	rs7543459	G	C	G	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr1	219392036	219392037	chr1:219392037:C:T	rs79222190	C	T	C	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr1	219434399	219434400	chr1:219434400:G:A	rs74620713	G	A	G	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr1	219669248	219669249	chr1:219669249:C:T	rs1416000	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	-	7.212456609225008	6.423571575367866	GCCATAAAG
chr1	219784799	219784800	chr1:219784800:T:C	rs4440861	T	C	C	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr1	219811243	219811244	chr1:219811244:C:T	rs74429483	C	T	T	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr1	219876006	219876007	chr1:219876007:G:A	rs77335914	G	A	G	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr1	219988509	219988510	chr1:219988510:T:C	rs1211334672	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.091711387329735	5.757632787467242	CCCATCAAA
chr1	219988516	219988517	chr1:219988517:C:G	rs2291838	C	G	G	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr1	220348018	220348019	chr1:220348019:G:A	rs12075594	G	A	A	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr1	220487226	220487227	chr1:220487227:A:G	rs12562172	A	G	N	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr1	220692675	220692676	chr1:220692676:T:G	rs1690714	T	G	g	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr1	220765183	220765184	chr1:220765184:G:A	rs11589296	G	A	G	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr1	220765225	220765226	chr1:220765226:A:G	rs425473	A	G	G	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr1	220803794	220803795	chr1:220803795:T:G	rs963470755	T	G	T	Hoxd9.mouse_homeodomain_1	6	1	-	8.027213970992095	6.2801301561512854	CACATAAAA
chr1	220907586	220907587	chr1:220907587:A:G	rs2807866	A	G	G	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr1	221029671	221029672	chr1:221029672:A:G	rs7545282	A	G	G	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr1	221099815	221099816	chr1:221099816:G:A	rs7554672	G	A	G	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr1	221118245	221118246	chr1:221118246:C:T	rs7511784	C	T	C	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr1	221292689	221292690	chr1:221292690:C:T	rs58846930	C	T	C	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr1	221478137	221478138	chr1:221478138:G:A	rs74603453	G	A	G	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr1	221523114	221523115	chr1:221523115:G:A	rs10863632	G	A	A	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr1	221720388	221720389	chr1:221720389:A:G	rs7541733	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	7.45645131454733	6.122372714684838	CCCATAAAC
chr1	221903740	221903741	chr1:221903741:G:C	rs4460649	G	C	G	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr1	222006807	222006808	chr1:222006808:T:C	rs17442058	T	C	T	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr1	222161780	222161781	chr1:222161781:C:T	rs10495183	C	T	T	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr1	222283349	222283350	chr1:222283350:T:G	rs35869320	T	G	T	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr1	222357559	222357560	chr1:222357560:C:T	rs35923305	C	T	C	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr1	222442268	222442269	chr1:222442269:T:G	rs35676816	T	G	T	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr1	222916250	222916251	chr1:222916251:G:A	rs138458667	G	A	G	Hoxd9.mouse_homeodomain_1	1	1	-	7.212456609225008	5.897654694892	GCCATAAAG
chr1	222948371	222948372	chr1:222948372:A:G	rs370516475	A	G	A	Hoxd9.mouse_homeodomain_1	2	1	+	8.287463081002919	5.5210272824374	CCAATAAAA
chr1	223050871	223050872	chr1:223050872:G:A	rs4846790	G	A	g	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr1	223275708	223275709	chr1:223275709:A:C	rs61837636	A	C	C	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr1	223756392	223756393	chr1:223756393:C:T	rs28370098	C	T	C	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr1	224387315	224387316	chr1:224387316:C:T	rs17503938	C	T	C	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr1	224433177	224433178	chr1:224433178:T:C	rs573080422	T	C	T	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr1	224497647	224497648	chr1:224497648:T:A	rs11584057	T	A	t	Hoxd9.mouse_homeodomain_1	5	1	-	8.027213970992095	7.447682848858594	CACATAAAA
chr1	224554265	224554266	chr1:224554266:G:T	rs2786562	G	T	T	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr1	224745381	224745382	chr1:224745382:G:A	rs72761847	G	A	G	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr1	225361305	225361306	chr1:225361306:T:C	rs16844799	T	C	t	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr1	225361309	225361310	chr1:225361310:C:G	rs6673285	C	G	c	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr1	225426437	225426438	chr1:225426438:C:A	rs6673410	C	A	A	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr1	225460597	225460598	chr1:225460598:T:C	rs6684314	T	C	C	Hoxd9.mouse_homeodomain_1	3	1	-	8.98901893988973	7.654940340027237	CCCATAAAA
chr1	225477991	225477992	chr1:225477992:T:A	rs6676201	T	A	A	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr1	225537286	225537287	chr1:225537287:G:T	rs12032961	G	T	G	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr1	225606923	225606924	chr1:225606924:A:G	rs60588592	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.287463081002919	6.953384481140425	CCAATAAAA
chr1	225612258	225612259	chr1:225612259:C:T	rs960172021	C	T	C	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr1	225699584	225699585	chr1:225699585:C:A	rs75870274	C	A	C	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr1	225774630	225774631	chr1:225774631:A:G	rs6659660	A	G	G	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr1	225778279	225778280	chr1:225778280:A:G	rs75348489	A	G	A	Hoxd9.mouse_homeodomain_1	4	1	-	7.212456609225008	4.557409964362429	GCCATAAAG
chr1	225831064	225831065	chr1:225831065:T:C	rs56287756	T	C	-	Hoxd9.mouse_homeodomain_1	3	1	-	8.287463081002919	6.953384481140425	CCAATAAAA
chr1	225875745	225875746	chr1:225875746:C:A	rs360092	C	A	C	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr1	225945489	225945490	chr1:225945490:A:G	rs12567618	A	G	G	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr1	226089433	226089434	chr1:226089434:C:A	rs76150976	C	A	C	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr1	226125754	226125755	chr1:226125755:T:A	rs1877153	T	A	T	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr1	226616411	226616412	chr1:226616412:G:A	rs12141110	G	A	G	Hoxd9.mouse_homeodomain_1	0	1	-	8.287463081002919	6.392915775693977	CCAATAAAA
chr1	226654532	226654533	chr1:226654533:C:T	rs3820637	C	T	C	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr1	226781819	226781820	chr1:226781820:T:G	rs835653	T	G	G	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr1	226810389	226810390	chr1:226810390:G:A	rs6426544	G	A	G	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr1	226810394	226810395	chr1:226810395:G:A	rs61837760	G	A	G	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr1	226820800	226820801	chr1:226820801:C:A	rs12405779	C	A	C	Hoxd9.mouse_homeodomain_1	1	1	+	8.98901893988973	8.027213970992095	CCCATAAAA
chr1	226989742	226989743	chr1:226989743:A:G	rs3768424	A	G	G	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr1	226989754	226989755	chr1:226989755:G:C	rs1168617328	G	C	G	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr1	227031612	227031613	chr1:227031613:A:G	rs1319103	A	G	G	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr1	227102032	227102033	chr1:227102033:C:G	rs529430	C	G	C	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr1	227102144	227102145	chr1:227102145:A:G	rs117759115	A	G	A	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr1	227268214	227268215	chr1:227268215:A:C	rs3106477	A	C	C	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr1	227317386	227317387	chr1:227317387:A:C	rs12128753	A	C	A	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr1	227357970	227357971	chr1:227357971:C:T	rs76361332	C	T	C	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr1	227481980	227481981	chr1:227481981:T:A	rs1495850	T	A	a	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr1	227633281	227633282	chr1:227633282:A:G	rs2093609	A	G	-	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr1	227793432	227793433	chr1:227793433:G:A	rs147153517	G	A	G	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr1	227886695	227886696	chr1:227886696:G:A	rs114337303	G	A	G	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr1	227919941	227919942	chr1:227919942:T:C	rs3856330	T	C	C	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr1	228087792	228087793	chr1:228087793:A:C	rs60245137	A	C	A	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr1	228324320	228324321	chr1:228324321:C:T	rs11578521	C	T	T	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr1	228333178	228333179	chr1:228333179:C:T	rs416564	C	T	C	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr1	228407705	228407706	chr1:228407706:A:G	rs79654767	A	G	A	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr1	228540505	228540506	chr1:228540506:G:A	rs61827317	G	A	G	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr1	228542170	228542171	chr1:228542171:A:G	rs762574944	A	G	A	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr1	228555936	228555937	chr1:228555937:C:G	rs12035781	C	G	C	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr1	228824649	228824650	chr1:228824650:C:T	rs72754073	C	T	C	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr1	228847472	228847473	chr1:228847473:G:C	rs111395032	G	C	G	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr1	228862803	228862804	chr1:228862804:G:A	rs141752524	G	A	G	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr1	228930514	228930515	chr1:228930515:A:G	rs10737438	A	G	A	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr1	228953818	228953819	chr1:228953819:C:T	rs769505279	C	T	.	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr1	228954343	228954344	chr1:228954344:G:C	rs10799502	G	C	.	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr1	228965081	228965082	chr1:228965082:C:T	rs519791	C	T	T	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr1	229026767	229026768	chr1:229026768:C:T	rs6677583	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	+	8.027213970992095	6.132666665683155	CACATAAAA
chr1	229666803	229666804	chr1:229666804:T:C	rs879265	T	C	T	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr1	229905336	229905337	chr1:229905337:C:T	rs3853555	C	T	C	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr1	229989715	229989716	chr1:229989716:G:A	rs146933807	G	A	G	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr1	230045171	230045172	chr1:230045172:A:G	rs28516692	A	G	G	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr1	230140151	230140152	chr1:230140152:G:T	rs115500734	G	T	G	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr1	230140168	230140169	chr1:230140169:C:T	rs80203588	C	T	C	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr1	230166029	230166030	chr1:230166030:G:A	rs2296065	G	A	A	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr1	230171650	230171651	chr1:230171651:C:T	rs2144301	C	T	T	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr1	230186961	230186962	chr1:230186962:A:G	rs600845	A	G	A	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr1	230187921	230187922	chr1:230187922:G:T	rs12565844	G	T	G	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr1	230197381	230197382	chr1:230197382:G:C	rs11808224	G	C	G	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr1	230197383	230197384	chr1:230197384:C:A	rs7526776	C	A	A	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr1	230282243	230282244	chr1:230282244:T:C	rs12563115	T	C	T	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr1	230282252	230282253	chr1:230282253:C:T	rs9431818	C	T	T	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr1	230293773	230293774	chr1:230293774:G:C	rs6696829	G	C	C	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr1	230502214	230502215	chr1:230502215:A:G	rs1341972	A	G	A	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr1	230509787	230509788	chr1:230509788:A:C	rs186691118	A	C	A	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr1	230557505	230557506	chr1:230557506:G:A	rs1075142	G	A	G	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr1	230565541	230565542	chr1:230565542:G:A	rs12060563	G	A	G	Hoxd9.mouse_homeodomain_1	0	1	-	8.027213970992095	6.132666665683155	CACATAAAA
chr1	230742708	230742709	chr1:230742709:C:G	rs116186135	C	G	C	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr1	230749383	230749384	chr1:230749384:C:A	rs73104635	C	A	C	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr1	230752705	230752706	chr1:230752706:T:A	rs181297351	T	A	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.716978748812629	5.7134976120039855	GACATAAAA
chr1	230919453	230919454	chr1:230919454:T:C	rs113929935	T	C	T	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr1	230979907	230979908	chr1:230979908:C:T	rs12030129	C	T	C	Hoxd9.mouse_homeodomain_1	3	1	-	7.34470511784777	8.678783717710262	GCCGTAAAA
chr1	231062585	231062586	chr1:231062586:A:C	rs4369216	A	C	C	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr1	231188510	231188511	chr1:231188511:G:A	rs76856921	G	A	G	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr1	231214050	231214051	chr1:231214051:G:A	rs80244906	G	A	G	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr1	231406343	231406344	chr1:231406344:T:C	rs537135	T	C	C	Hoxd9.mouse_homeodomain_1	8	1	-	7.889898683853121	6.423571575367866	ACCATAAAA
chr1	231688539	231688540	chr1:231688540:G:C	rs7552630	G	C	c	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr1	231700194	231700195	chr1:231700195:C:A	rs11577035	C	A	C	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr1	231777146	231777147	chr1:231777147:C:A	rs16854957	C	A	A	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr1	231777906	231777907	chr1:231777907:A:G	rs2812392	A	G	G	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr1	231856350	231856351	chr1:231856351:C:T	rs1079344	C	T	C	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr1	231856377	231856378	chr1:231856378:G:A	rs4546903	G	A	G	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr1	232012846	232012847	chr1:232012847:A:G	rs114596206	A	G	A	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr1	232223581	232223582	chr1:232223582:A:C	rs10465472	A	C	A	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr1	232252548	232252549	chr1:232252549:C:T	rs11801690	C	T	C	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr1	232370011	232370012	chr1:232370012:C:A	rs76141051	C	A	C	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr1	232405085	232405086	chr1:232405086:T:G	rs969957181	T	G	T	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr1	232524080	232524081	chr1:232524081:T:C	rs7535469	T	C	T	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr1	232590706	232590707	chr1:232590707:T:C	rs6667595	T	C	T	Hoxd9.mouse_homeodomain_1	4	1	+	7.889898683853121	5.234852038990543	ACCATAAAA
chr1	232590709	232590710	chr1:232590710:A:G	rs6664522	A	G	A	Hoxd9.mouse_homeodomain_1	7	1	+	7.889898683853121	1.18607273726139	ACCATAAAA
chr1	232628645	232628646	chr1:232628646:G:A	rs59439337	G	A	G	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr1	232776701	232776702	chr1:232776702:T:C	rs73093025	T	C	t	Hoxd9.mouse_homeodomain_1	6	1	-	8.98901893988973	2.285192993297999	CCCATAAAA
chr1	233051529	233051530	chr1:233051530:A:C	rs6694792	A	C	A	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr1	233167081	233167082	chr1:233167082:T:C	rs4649288	T	C	C	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr1	233187022	233187023	chr1:233187023:C:A	rs16858817	C	A	C	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr1	233241842	233241843	chr1:233241843:A:G	rs11809254	A	G	A	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr1	233243300	233243301	chr1:233243301:A:G	rs114638553	A	G	A	Hoxd9.mouse_homeodomain_1	4	1	-	8.099252595576761	5.444205950714182	GCCATTAAA
chr1	233290866	233290867	chr1:233290867:G:A	rs10910127	G	A	G	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr1	233357953	233357954	chr1:233357954:G:A	rs3737841	G	A	G	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr1	233424735	233424736	chr1:233424736:G:A	rs12135466	G	A	G	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr1	233605332	233605333	chr1:233605333:A:G	rs12403337	A	G	A	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr1	233615276	233615277	chr1:233615277:G:A	rs1165434	G	A	G	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr1	233630102	233630103	chr1:233630103:T:C	rs701221	T	C	C	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr1	233679930	233679931	chr1:233679931:C:A	rs659340	C	A	C	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr1	233791937	233791938	chr1:233791938:C:T	rs61455181	C	T	C	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr1	234047232	234047233	chr1:234047233:A:G	rs1598962	A	G	A	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr1	234184465	234184466	chr1:234184466:C:A	rs1379948	C	A	A	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr1	234288542	234288543	chr1:234288543:T:C	rs542494	T	C	T	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr1	234326475	234326476	chr1:234326476:A:C	rs61824469	A	C	A	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr1	234528884	234528885	chr1:234528885:G:A	rs271740	G	A	A	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr1	234544277	234544278	chr1:234544278:C:G	rs114959454	C	G	C	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr1	234558736	234558737	chr1:234558737:C:T	rs2884425	C	T	T	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr1	234605228	234605229	chr1:234605229:G:A	rs72749964	G	A	G	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr1	234618745	234618746	chr1:234618746:C:T	rs11590909	C	T	C	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr1	234631543	234631544	chr1:234631544:A:G	rs7537526	A	G	A	Hoxd9.mouse_homeodomain_1	1	1	+	7.716978748812629	2.2692504889278973	GACATAAAA
chr1	234640345	234640346	chr1:234640346:A:G	rs56291352	A	G	A	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr1	234715824	234715825	chr1:234715825:A:G	rs1012763049	A	G	A	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr1	234751225	234751226	chr1:234751226:A:G	rs568243825	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.027213970992095	6.693135371129603	CACATAAAA
chr1	234777957	234777958	chr1:234777958:G:A	rs6656761	G	A	G	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr1	234817837	234817838	chr1:234817838:T:A	rs536357198	T	A	t	Hoxd9.mouse_homeodomain_1	3	1	-	8.287463081002919	6.2839819441942755	CCAATAAAA
chr1	234823496	234823497	chr1:234823497:T:A	rs822839	T	A	T	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr1	234886935	234886936	chr1:234886936:G:A	rs545355765	G	A	G	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr1	234920117	234920118	chr1:234920118:A:T	rs6698918	A	T	A	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr1	234961297	234961298	chr1:234961298:C:A	rs10910536	C	A	A	Hoxd9.mouse_homeodomain_1	2	1	+	8.027213970992095	7.325658112105286	CACATAAAA
chr1	234965168	234965169	chr1:234965169:C:T	rs58346045	C	T	C	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr1	234969834	234969835	chr1:234969835:G:A	rs2090253	G	A	A	Hoxd9.mouse_homeodomain_1	1	1	-	8.287463081002919	6.972661166669912	CCAATAAAA
chr1	234974347	234974348	chr1:234974348:A:G	rs7551451	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	6.943160709270972	5.60908210940848	CCCATTAAG
chr1	234974372	234974373	chr1:234974373:C:T	rs72754160	C	T	C	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr1	234998027	234998028	chr1:234998028:C:G	chr1:234998028:C:G	C	G	C	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr1	235051167	235051168	chr1:235051168:T:C	rs78470423	T	C	T	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr1	235125573	235125574	chr1:235125574:A:C	rs7547668	A	C	A	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr1	235314490	235314491	chr1:235314491:G:C	rs12755851	G	C	G	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr1	235880109	235880110	chr1:235880110:G:T	rs10926960	G	T	G	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr1	235883939	235883940	chr1:235883940:A:G	rs7534625	A	G	G	Hoxd9.mouse_homeodomain_1	6	1	+	7.716978748812629	1.0131528022208975	GACATAAAA
chr1	235901895	235901896	chr1:235901896:A:G	rs72763464	A	G	A	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr1	235989293	235989294	chr1:235989294:C:T	rs116696005	C	T	C	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr1	235991918	235991919	chr1:235991919:T:C	rs6429452	T	C	T	Hoxd9.mouse_homeodomain_1	5	1	-	7.45645131454733	1.0822615963007745	CCCATAAAC
chr1	236010711	236010712	chr1:236010712:A:G	rs12143102	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.287463081002919	6.953384481140425	CCAATAAAA
chr1	236043010	236043011	chr1:236043011:C:T	rs75508279	C	T	C	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr1	236096270	236096271	chr1:236096271:T:C	rs966302	T	C	C	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr1	236106316	236106317	chr1:236106317:G:C	rs538840235	G	C	G	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr1	236153274	236153275	chr1:236153275:A:C	rs1885018	A	C	C	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr1	236156399	236156400	chr1:236156400:T:C	rs73121074	T	C	C	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr1	236177174	236177175	chr1:236177175:G:A	rs73122911	G	A	A	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr1	236356150	236356151	chr1:236356151:A:G	rs1726673	A	G	G	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr1	236406651	236406652	chr1:236406652:A:G	rs624507	A	G	G	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr1	236416874	236416875	chr1:236416875:C:T	rs10925119	C	T	T	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr1	236424493	236424494	chr1:236424494:A:G	rs607577	A	G	A	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr1	236490085	236490086	chr1:236490086:G:T	rs12047700	G	T	G	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr1	236494586	236494587	chr1:236494587:C:G	rs4659456	C	G	C	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr1	236524203	236524204	chr1:236524204:C:T	rs550734969	C	T	C	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr1	236623552	236623553	chr1:236623553:A:G	rs139687032	A	G	A	Hoxd9.mouse_homeodomain_1	2	1	+	8.287463081002919	5.5210272824374	CCAATAAAA
chr1	236678879	236678880	chr1:236678880:A:G	rs2794793	A	G	G	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr1	236947197	236947198	chr1:236947198:A:G	rs7545626	A	G	A	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr1	236972672	236972673	chr1:236972673:T:C	rs6698982	T	C	C	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr1	237044422	237044423	chr1:237044423:C:G	rs138683086	C	G	C	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr1	237763339	237763340	chr1:237763340:C:T	rs12080621	C	T	C	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr1	238371098	238371099	chr1:238371099:G:C	rs75352561	G	C	G	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr1	238455376	238455377	chr1:238455377:A:T	rs76279365	A	T	A	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr1	238481278	238481279	chr1:238481279:G:C	rs61746209	G	C	G	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr1	238601824	238601825	chr1:238601825:G:C	rs12093712	G	C	A	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr1	238780355	238780356	chr1:238780356:A:C	rs61830615	A	C	A	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr1	238806795	238806796	chr1:238806796:T:C	rs12096431	T	C	C	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr1	239035261	239035262	chr1:239035262:G:A	rs12034964	G	A	G	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr1	239171170	239171171	chr1:239171171:A:G	rs12082609	A	G	A	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr1	239611710	239611711	chr1:239611711:A:G	rs147267673	A	G	A	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr1	239663358	239663359	chr1:239663359:G:A	rs2355232	G	A	A	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr1	239819075	239819076	chr1:239819076:A:G	rs1072320	A	G	A	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr1	239977685	239977686	chr1:239977686:C:A	rs12119833	C	A	c	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr1	239996821	239996822	chr1:239996822:T:G	rs12093992	T	G	t	Hoxd9.mouse_homeodomain_1	1	1	-	8.027213970992095	8.98901893988973	CACATAAAA
chr1	240054395	240054396	chr1:240054396:C:G	rs75280320	C	G	C	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr1	240056491	240056492	chr1:240056492:G:A	rs60520413	G	A	A	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr1	240056523	240056524	chr1:240056524:A:C	rs35106424	A	C	A	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr1	240115869	240115870	chr1:240115870:A:G	rs76704718	A	G	A	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr1	240149472	240149473	chr1:240149473:A:G	rs930838111	A	G	A	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr1	240259062	240259063	chr1:240259063:A:C	rs10802850	A	C	A	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr1	240291991	240291992	chr1:240291992:G:T	rs12079371	G	T	G	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr1	240315764	240315765	chr1:240315765:A:G	rs4233480	A	G	G	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr1	240356367	240356368	chr1:240356368:T:A	rs191973498	T	A	T	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr1	240356389	240356390	chr1:240356390:C:T	rs183128423	C	T	C	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr1	240499355	240499356	chr1:240499356:A:G	rs114496574	A	G	A	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr1	240499389	240499390	chr1:240499390:T:C	rs10926284	T	C	T	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr1	240510498	240510499	chr1:240510499:T:C	rs35060706	T	C	T	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr1	240583067	240583068	chr1:240583068:A:G	rs141211254	A	G	A	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr1	240653351	240653352	chr1:240653352:T:A	rs11590550	T	A	T	Hoxd9.mouse_homeodomain_1	4	1	+	8.287463081002919	1.445644633672313	CCAATAAAA
chr1	240743947	240743948	chr1:240743948:G:A	rs960130	G	A	G	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr1	240847477	240847478	chr1:240847478:T:C	rs785978	T	C	C	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr1	241004840	241004841	chr1:241004841:G:A	rs139636757	G	A	G	Hoxd9.mouse_homeodomain_1	2	1	-	7.34470511784777	0.8572646602241328	GCCGTAAAA
chr1	241234354	241234355	chr1:241234355:T:C	rs2815852	T	C	C	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr1	241236703	241236704	chr1:241236704:C:T	rs2686240	C	T	C	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr1	241422198	241422199	chr1:241422199:C:A	rs1539098	C	A	A	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr1	241801256	241801257	chr1:241801257:C:T	rs4658661	C	T	C	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr1	241918537	241918538	chr1:241918538:T:C	rs6666851	T	C	N	Hoxd9.mouse_homeodomain_1	3	1	-	7.889898683853121	6.555820083990628	ACCATAAAA
chr1	241950406	241950407	chr1:241950407:A:G	rs28662297	A	G	G	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr1	241950488	241950489	chr1:241950489:G:A	rs141413259	G	A	G	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr1	241950495	241950496	chr1:241950496:C:T	rs28438742	C	T	C	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr1	242025777	242025778	chr1:242025778:C:T	rs79148591	C	T	c	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr1	242025781	242025782	chr1:242025782:G:A	rs28496699	G	A	G	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr1	242188505	242188506	chr1:242188506:C:T	rs75101405	C	T	C	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr1	242283338	242283339	chr1:242283339:T:C	rs114886996	T	C	t	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr1	242378394	242378395	chr1:242378395:T:C	rs6429351	T	C	T	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr1	242380322	242380323	chr1:242380323:C:T	rs57647669	C	T	T	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr1	242426353	242426354	chr1:242426354:G:T	rs2654872	G	T	T	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr1	242579434	242579435	chr1:242579435:G:C	rs1938340	G	C	C	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr1	242579461	242579462	chr1:242579462:A:G	rs1938339	A	G	A	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr1	242788775	242788776	chr1:242788776:T:G	rs914951	T	G	G	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr1	242835844	242835845	chr1:242835845:C:T	rs79866556	C	T	C	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr1	243445664	243445665	chr1:243445665:A:G	rs6703335	A	G	A	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr1	244007152	244007153	chr1:244007153:G:T	rs12122270	G	T	T	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr1	244093242	244093243	chr1:244093243:C:G	rs2454234	C	G	C	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr1	244187601	244187602	chr1:244187602:C:T	rs74882083	C	T	C	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr1	244325426	244325427	chr1:244325427:T:C	rs74982651	T	C	T	Hoxd9.mouse_homeodomain_1	4	1	+	7.716978748812629	5.061932103950051	GACATAAAA
chr1	244368843	244368844	chr1:244368844:T:C	rs12142730	T	C	T	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr1	244599729	244599730	chr1:244599730:T:C	rs10927276	T	C	C	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr1	244673659	244673660	chr1:244673660:T:G	rs878964	T	G	.	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr1	244843524	244843525	chr1:244843525:A:G	rs1053700	A	G	A	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr1	245028993	245028994	chr1:245028994:T:C	rs545679	T	C	C	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr1	245062689	245062690	chr1:245062690:T:C	rs672289	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.287463081002919	6.953384481140425	CCAATAAAA
chr1	245256009	245256010	chr1:245256010:A:G	rs907015	A	G	A	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr1	245256026	245256027	chr1:245256027:T:C	rs907016	T	C	C	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr1	245276017	245276018	chr1:245276018:G:T	rs6658420	G	T	T	Hoxd9.mouse_homeodomain_1	1	1	-	7.241935125048919	6.2801301561512854	CCCATACAA
chr1	245332827	245332828	chr1:245332828:G:T	rs34497302	G	T	T	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr1	245603451	245603452	chr1:245603452:A:C	rs12028539	A	C	A	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr1	245952442	245952443	chr1:245952443:A:G	rs10802303	A	G	A	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr1	245955367	245955368	chr1:245955368:G:A	rs12031990	G	A	G	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr1	246004524	246004525	chr1:246004525:C:G	rs12406160	C	G	C	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr1	246004532	246004533	chr1:246004533:C:A	rs189588963	C	A	C	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr1	246069197	246069198	chr1:246069198:T:A	rs2153029	T	A	T	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr1	246070739	246070740	chr1:246070740:T:G	rs2787967	T	G	G	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr1	246219467	246219468	chr1:246219468:A:G	rs6426285	A	G	A	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr1	246304444	246304445	chr1:246304445:G:A	rs4654237	G	A	G	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr1	246319398	246319399	chr1:246319399:A:G	rs80114668	A	G	a	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr1	246506376	246506377	chr1:246506377:C:T	rs112023519	C	T	C	Hoxd9.mouse_homeodomain_1	1	1	+	8.099252595576761	6.784450681243753	GCCATTAAA
chr1	246506400	246506401	chr1:246506401:G:A	rs4654275	G	A	G	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr1	246543044	246543045	chr1:246543045:A:G	rs3124114	A	G	G	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr1	246597267	246597268	chr1:246597268:C:G	rs3007401	C	G	C	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr1	246629510	246629511	chr1:246629511:G:T	rs116554315	G	T	T	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr1	246678013	246678014	chr1:246678014:T:C	rs58719925	T	C	T	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr1	246780244	246780245	chr1:246780245:A:C	rs41267531	A	C	A	Hoxd9.mouse_homeodomain_1	4	1	-	8.027213970992095	1.1853955236614904	CACATAAAA
chr1	247327004	247327005	chr1:247327005:G:A	rs6657577	G	A	A	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr1	247339142	247339143	chr1:247339143:C:T	rs535676036	C	T	C	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr1	247473603	247473604	chr1:247473604:C:T	rs4925674	C	T	C	Hoxd9.mouse_homeodomain_1	3	1	-	7.34470511784777	8.678783717710262	GCCGTAAAA
chr1	248261293	248261294	chr1:248261294:G:A	rs6695468	G	A	G	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr1	248352811	248352812	chr1:248352812:G:A	rs28582047	G	A	G	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr1	248428511	248428512	chr1:248428512:C:T	rs28758598	C	T	.	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr1	248859751	248859752	chr1:248859752:C:G	rs75810653	C	G	C	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr1	248889006	248889007	chr1:248889007:A:G	rs12752429	A	G	G	Hoxd9.mouse_homeodomain_1	7	1	+	7.45645131454733	0.752625367955599	CCCATAAAC
chr10	91997	91998	chr10:91998:G:T	rs78678255	G	T	g	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr10	239172	239173	chr10:239173:C:G	rs17221239	C	G	C	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr10	302834	302835	chr10:302835:G:C	rs3123232	G	C	G	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr10	437649	437650	chr10:437650:G:A	rs7917156	G	A	G	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr10	617027	617028	chr10:617028:G:A	rs61833003	G	A	G	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr10	788795	788796	chr10:788796:G:A	rs4881530	G	A	G	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr10	804821	804822	chr10:804822:A:G	rs10904571	A	G	G	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr10	924485	924486	chr10:924486:A:G	rs11253516	A	G	A	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr10	954297	954298	chr10:954298:A:G	rs758349635	A	G	A	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr10	1076768	1076769	chr10:1076769:A:G	rs9783192	A	G	G	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr10	1106921	1106922	chr10:1106922:T:G	rs55886714	T	G	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.212456609225008	0.6369485050215262	GCCATAAAG
chr10	1162207	1162208	chr10:1162208:G:A	rs7095843	G	A	A	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr10	1553285	1553286	chr10:1553286:G:T	rs7087167	G	T	G	Hoxd9.mouse_homeodomain_1	1	1	-	8.099252595576761	7.137447626679127	GCCATTAAA
chr10	1614988	1614989	chr10:1614989:C:T	rs1874995	C	T	C	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr10	1648680	1648681	chr10:1648681:C:A	rs10903533	C	A	A	Hoxd9.mouse_homeodomain_1	3	1	-	7.34470511784777	6.675302580901619	GCCGTAAAA
chr10	1648680	1648681	chr10:1648681:C:T	chr10:1648681:C:T	C	T	A	Hoxd9.mouse_homeodomain_1	3	1	-	7.34470511784777	8.678783717710262	GCCGTAAAA
chr10	1923901	1923902	chr10:1923902:G:A	rs12766442	G	A	G	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr10	1933559	1933560	chr10:1933560:C:T	rs10903601	C	T	C	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr10	1978859	1978860	chr10:1978860:C:T	rs1335314	C	T	C	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr10	2593107	2593108	chr10:2593108:A:C	rs72773007	A	C	A	Hoxd9.mouse_homeodomain_1	5	1	-	8.409487817756228	2.6148292216431743	CCCATTAAA
chr10	2813654	2813655	chr10:2813655:C:T	rs10903868	C	T	T	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr10	2891186	2891187	chr10:2891187:A:G	rs10794966	A	G	G	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr10	2898275	2898276	chr10:2898276:G:T	rs7899284	G	T	G	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr10	3099402	3099403	chr10:3099403:T:C	rs74736575	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.716978748812629	6.382900148950135	GACATAAAA
chr10	3172429	3172430	chr10:3172430:C:T	rs116673784	C	T	C	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr10	3272798	3272799	chr10:3272799:A:T	rs7907327	A	T	A	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr10	3437316	3437317	chr10:3437317:A:G	rs933883429	A	G	A	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr10	3464343	3464344	chr10:3464344:A:T	chr10:3464344:A:T	A	T	A	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr10	3503832	3503833	chr10:3503833:A:T	rs7896132	A	T	A	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr10	3668243	3668244	chr10:3668244:T:A	rs60584803	T	A	T	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr10	3864893	3864894	chr10:3864894:A:G	rs7905560	A	G	G	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr10	3866749	3866750	chr10:3866750:A:C	rs10904112	A	C	C	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr10	3951005	3951006	chr10:3951006:G:C	rs10795104	G	C	a	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr10	4035071	4035072	chr10:4035072:T:G	rs2645226	T	G	G	Hoxd9.mouse_homeodomain_1	4	1	+	7.091711387329735	0.2498929399991291	CCCATCAAA
chr10	4083970	4083971	chr10:4083971:G:A	rs1265651722	G	A	G	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr10	4092872	4092873	chr10:4092873:T:C	rs6601804	T	C	C	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr10	4191560	4191561	chr10:4191561:C:A	rs74114653	C	A	C	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr10	4280457	4280458	chr10:4280458:T:C	rs920085095	T	C	T	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr10	4298368	4298369	chr10:4298369:T:A	rs12415713	T	A	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.716978748812629	5.7134976120039855	GACATAAAA
chr10	4315856	4315857	chr10:4315857:C:T	rs12773994	C	T	T	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr10	4450332	4450333	chr10:4450333:T:C	rs10508283	T	C	T	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr10	4764222	4764223	chr10:4764223:A:G	rs17300566	A	G	A	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr10	4764249	4764250	chr10:4764250:A:G	rs143772886	A	G	A	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr10	4771756	4771757	chr10:4771757:A:G	rs77042134	A	G	A	Hoxd9.mouse_homeodomain_1	7	1	+	7.45645131454733	0.752625367955599	CCCATAAAC
chr10	4807965	4807966	chr10:4807966:T:C	rs75295407	T	C	T	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr10	4807980	4807981	chr10:4807981:C:T	rs2924286	C	T	T	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr10	4814950	4814951	chr10:4814951:A:G	rs3100192	A	G	A	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr10	4934617	4934618	chr10:4934618:C:A	rs12253332	C	A	C	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr10	4941397	4941398	chr10:4941398:C:T	rs4268415	C	T	T	Hoxd9.mouse_homeodomain_1	2	1	+	8.027213970992095	1.5397735133684596	CACATAAAA
chr10	5467196	5467197	chr10:5467197:G:A	rs77386782	G	A	G	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr10	5518162	5518163	chr10:5518163:C:T	rs190334794	C	T	C	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr10	5573994	5573995	chr10:5573995:T:A	rs4242800	T	A	T	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr10	5661313	5661314	chr10:5661314:C:T	rs12248558	C	T	-	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr10	5662016	5662017	chr10:5662017:G:A	rs7084261	G	A	a	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr10	5804728	5804729	chr10:5804729:T:C	rs72772386	T	C	T	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr10	5807356	5807357	chr10:5807357:A:G	rs565820079	A	G	A	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr10	6001570	6001571	chr10:6001571:G:A	rs12255506	G	A	G	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr10	6028711	6028712	chr10:6028712:G:A	rs2025346	G	A	G	Hoxd9.mouse_homeodomain_1	3	1	+	7.654940340027237	8.98901893988973	CCCGTAAAA
chr10	6069111	6069112	chr10:6069112:T:C	rs7893324	T	C	T	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr10	6095995	6095996	chr10:6095996:A:G	rs60859211	A	G	A	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr10	6120190	6120191	chr10:6120191:C:G	rs11256860	C	G	c	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr10	6162019	6162020	chr10:6162020:C:T	rs35420438	C	T	C	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr10	6200565	6200566	chr10:6200566:C:T	rs10905981	C	T	C	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr10	6263436	6263437	chr10:6263437:C:A	rs142098482	C	A	C	Hoxd9.mouse_homeodomain_1	0	1	-	7.1462160923678635	5.561904009238388	GCCATAAAC
chr10	6348229	6348230	chr10:6348230:G:C	rs2387397	G	C	C	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr10	6348272	6348273	chr10:6348273:A:G	rs74464758	A	G	A	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr10	6412356	6412357	chr10:6412357:G:C	rs612395	G	C	C	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr10	6499960	6499961	chr10:6499961:T:C	rs11259245	T	C	T	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr10	7318349	7318350	chr10:7318350:C:G	rs7908488	C	G	C	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr10	7412101	7412102	chr10:7412102:G:T	rs145359890	G	T	G	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr10	7479280	7479281	chr10:7479281:A:G	rs886794698	A	G	A	Hoxd9.mouse_homeodomain_1	1	1	+	7.716978748812629	2.2692504889278973	GACATAAAA
chr10	7568249	7568250	chr10:7568250:C:T	rs12416004	C	T	T	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr10	7606299	7606300	chr10:7606300:T:C	rs7101089	T	C	T	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr10	7606309	7606310	chr10:7606310:T:C	rs11255233	T	C	C	Hoxd9.mouse_homeodomain_1	5	1	-	7.1462160923678635	0.7720263741213071	GCCATAAAC
chr10	7618502	7618503	chr10:7618503:A:G	rs11255240	A	G	A	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr10	7618526	7618527	chr10:7618527:C:A	rs11255241	C	A	A	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr10	7787073	7787074	chr10:7787074:T:C	rs2802460	T	C	T	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr10	8088823	8088824	chr10:8088824:G:A	rs34570102	G	A	G	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr10	8088826	8088827	chr10:8088827:C:A	rs10752127	C	A	C	Hoxd9.mouse_homeodomain_1	1	1	+	8.98901893988973	8.027213970992095	CCCATAAAA
chr10	8127673	8127674	chr10:8127674:A:G	rs17447713	A	G	A	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr10	8160285	8160286	chr10:8160286:C:T	rs61835509	C	T	c	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr10	8331695	8331696	chr10:8331696:C:T	rs151107669	C	T	C	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr10	8410802	8410803	chr10:8410803:C:T	rs2646416	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	-	7.212456609225008	6.423571575367866	GCCATAAAG
chr10	8460877	8460878	chr10:8460878:G:T	rs17143715	G	T	G	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr10	8576248	8576249	chr10:8576249:G:C	rs76452683	G	C	G	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr10	8703034	8703035	chr10:8703035:C:T	rs1537601	C	T	T	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr10	8911688	8911689	chr10:8911689:G:C	rs2120795	G	C	G	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr10	9039442	9039443	chr10:9039443:T:C	rs2797276	T	C	C	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr10	9043339	9043340	chr10:9043340:T:C	rs2797272	T	C	T	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr10	9060648	9060649	chr10:9060649:A:T	rs978329	A	T	T	Hoxd9.mouse_homeodomain_1	4	1	-	8.287463081002919	1.445644633672313	CCAATAAAA
chr10	9064904	9064905	chr10:9064905:T:G	rs17145164	T	G	T	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr10	9261066	9261067	chr10:9261067:A:G	rs11256133	A	G	A	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr10	9289994	9289995	chr10:9289995:T:G	rs185577534	T	G	T	Hoxd9.mouse_homeodomain_1	8	1	-	8.099252595576761	6.566684970234361	GCCATTAAA
chr10	9296306	9296307	chr10:9296307:T:A	rs1149972	T	A	T	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr10	9301345	9301346	chr10:9301346:C:T	rs556347202	C	T	C	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr10	9312261	9312262	chr10:9312262:C:T	rs79198242	C	T	C	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr10	9423496	9423497	chr10:9423497:A:T	rs1855679	A	T	T	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr10	9427463	9427464	chr10:9427464:G:A	rs11256199	G	A	G	Hoxd9.mouse_homeodomain_1	1	1	-	8.678783717710262	7.363981803377255	GCCATAAAA
chr10	9501213	9501214	chr10:9501214:A:C	rs7894116	A	C	C	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr10	9510856	9510857	chr10:9510857:C:A	rs997376354	C	A	C	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr10	9578579	9578580	chr10:9578580:A:T	rs10128525	A	T	T	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr10	9668711	9668712	chr10:9668712:T:C	rs12570090	T	C	C	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr10	9786532	9786533	chr10:9786533:T:C	rs117319990	T	C	T	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr10	9955086	9955087	chr10:9955087:C:A	rs2225990	C	A	A	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr10	10414568	10414569	chr10:10414569:G:C	rs10905721	G	C	G	Hoxd9.mouse_homeodomain_1	1	1	-	8.287463081002919	1.877929852220554	CCAATAAAA
chr10	10461287	10461288	chr10:10461288:C:A	rs7895315	C	A	A	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr10	10613074	10613075	chr10:10613075:A:G	rs4749973	A	G	G	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr10	10658072	10658073	chr10:10658073:A:G	rs1359890	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.98901893988973	7.654940340027237	CCCATAAAA
chr10	10683499	10683500	chr10:10683500:A:G	rs11256768	A	G	A	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr10	10793256	10793257	chr10:10793257:T:C	rs11256836	T	C	C	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr10	10816739	10816740	chr10:10816740:A:G	rs17520345	A	G	A	Hoxd9.mouse_homeodomain_1	6	1	+	8.099252595576761	1.3954266489850298	GCCATTAAA
chr10	10883358	10883359	chr10:10883359:G:A	rs7906953	G	A	G	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr10	10916026	10916027	chr10:10916027:C:T	rs6602466	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	-	7.716978748812629	6.928093714955487	GACATAAAA
chr10	11036795	11036796	chr10:11036796:G:T	rs7092032	G	T	G	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr10	11164731	11164732	chr10:11164732:A:G	rs541294852	A	G	A	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr10	11185704	11185705	chr10:11185705:T:C	rs656176	T	C	C	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr10	11196128	11196129	chr10:11196129:C:T	rs1261723121	C	T	C	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr10	11204305	11204306	chr10:11204306:C:A	rs1109861	C	A	C	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr10	11257643	11257644	chr10:11257644:A:G	rs56183744	A	G	A	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr10	11257665	11257666	chr10:11257666:G:C	rs41291247	G	C	G	Hoxd9.mouse_homeodomain_1	1	1	-	7.091711387329735	0.6821781585473693	CCCATCAAA
chr10	11379512	11379513	chr10:11379513:T:A	rs7078214	T	A	A	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr10	11430821	11430822	chr10:11430822:G:T	rs73567333	G	T	G	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr10	11515399	11515400	chr10:11515400:G:T	rs11257144	G	T	G	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr10	11533732	11533733	chr10:11533733:T:A	rs12570421	T	A	T	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr10	11533742	11533743	chr10:11533743:T:G	rs12570422	T	G	T	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr10	11606108	11606109	chr10:11606109:C:A	rs12781475	C	A	C	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr10	11612457	11612458	chr10:11612458:A:C	rs117787139	A	C	A	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr10	11811406	11811407	chr10:11811407:A:T	rs72766329	A	T	T	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr10	11882836	11882837	chr10:11882837:G:A	rs72775941	G	A	g	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr10	12165887	12165888	chr10:12165888:A:T	rs4750179	A	T	A	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr10	12180556	12180557	chr10:12180557:C:A	chr10:12180557:C:A	C	A	C	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr10	12180556	12180557	chr10:12180557:C:T	rs3780865	C	T	C	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr10	12193493	12193494	chr10:12193494:A:C	chr10:12193494:A:C	A	C	C	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr10	12193493	12193494	chr10:12193494:A:G	rs3758377	A	G	C	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr10	12193532	12193533	chr10:12193533:T:G	rs571028572	T	G	T	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr10	12313341	12313342	chr10:12313342:T:C	rs6602578	T	C	t	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr10	12469347	12469348	chr10:12469348:T:C	rs59145998	T	C	T	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr10	12549217	12549218	chr10:12549218:C:T	rs34533532	C	T	C	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr10	12707062	12707063	chr10:12707063:G:A	rs45479699	G	A	G	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr10	12801746	12801747	chr10:12801747:C:T	rs11595099	C	T	C	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr10	12808146	12808147	chr10:12808147:T:C	rs1999370	T	C	C	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr10	12808150	12808151	chr10:12808151:C:A	rs59839798	C	A	C	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr10	12869724	12869725	chr10:12869725:G:C	rs12412014	G	C	G	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr10	12903202	12903203	chr10:12903203:T:C	rs1475611	T	C	T	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr10	12980683	12980684	chr10:12980684:C:T	rs557264	C	T	T	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr10	13072702	13072703	chr10:13072703:T:C	rs72478299	T	C	C	Hoxd9.mouse_homeodomain_1	4	1	+	8.287463081002919	5.632416436140341	CCAATAAAA
chr10	13205154	13205155	chr10:13205155:T:C	rs72779599	T	C	t	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr10	13210831	13210832	chr10:13210832:T:C	rs12779658	T	C	T	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr10	13236969	13236970	chr10:13236970:T:C	rs17527815	T	C	T	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr10	13645889	13645890	chr10:13645890:G:A	rs17153667	G	A	G	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr10	13667916	13667917	chr10:13667917:A:G	rs10752316	A	G	G	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr10	13769297	13769298	chr10:13769298:G:C	rs7094607	G	C	G	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr10	13778622	13778623	chr10:13778623:T:G	rs11258597	T	G	G	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr10	13830628	13830629	chr10:13830629:T:C	rs80207127	T	C	C	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr10	13830659	13830660	chr10:13830660:C:T	rs116097186	C	T	T	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr10	13924519	13924520	chr10:13924520:A:G	rs74121795	A	G	A	Hoxd9.mouse_homeodomain_1	5	1	+	7.212456609225008	0.8382668909784519	GCCATAAAG
chr10	13978941	13978942	chr10:13978942:T:C	rs73587371	T	C	T	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr10	14016665	14016666	chr10:14016666:C:A	rs112948340	C	A	C	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr10	14056555	14056556	chr10:14056556:C:A	rs12249279	C	A	A	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr10	14057306	14057307	chr10:14057307:A:C	rs7901315	A	C	A	Hoxd9.mouse_homeodomain_1	6	1	+	7.9772278588234515	6.230144043982641	GCAATAAAA
chr10	14057315	14057316	chr10:14057316:C:T	rs7916518	C	T	T	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr10	14072183	14072184	chr10:14072184:A:G	rs1000962	A	G	A	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr10	14159225	14159226	chr10:14159226:C:T	rs10796162	C	T	T	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr10	14191447	14191448	chr10:14191448:G:A	rs141397766	G	A	G	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr10	14235521	14235522	chr10:14235522:T:G	rs10796174	T	G	T	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr10	14241014	14241015	chr10:14241015:T:G	rs61836097	T	G	T	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr10	14468638	14468639	chr10:14468639:A:C	rs1853878	A	C	C	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr10	14486930	14486931	chr10:14486931:G:A	rs189949564	G	A	T	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr10	14562783	14562784	chr10:14562784:C:T	rs80309617	C	T	C	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr10	14562785	14562786	chr10:14562786:C:T	rs78008522	C	T	T	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr10	14588526	14588527	chr10:14588527:A:T	rs570901788	A	T	A	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr10	14592365	14592366	chr10:14592366:G:A	rs35513076	G	A	G	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr10	14592382	14592383	chr10:14592383:T:G	rs77610675	T	G	T	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr10	14658243	14658244	chr10:14658244:G:A	rs10906734	G	A	A	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr10	14700535	14700536	chr10:14700536:T:C	rs12355856	T	C	T	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr10	14719092	14719093	chr10:14719093:G:A	rs873403	G	A	A	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr10	14936974	14936975	chr10:14936975:A:G	rs111386791	A	G	a	Hoxd9.mouse_homeodomain_1	3	1	+	8.678783717710262	7.34470511784777	GCCATAAAA
chr10	14962098	14962099	chr10:14962099:A:G	rs10796228	A	G	G	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr10	15107165	15107166	chr10:15107166:C:T	rs11819275	C	T	T	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr10	15197675	15197676	chr10:15197676:C:T	rs117309355	C	T	C	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr10	15268317	15268318	chr10:15268318:T:G	rs11259586	T	G	T	Hoxd9.mouse_homeodomain_1	5	1	+	7.075409217893736	1.2807506217806814	CCCGTTAAA
chr10	15289817	15289818	chr10:15289818:T:C	rs2138931	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.287463081002919	6.953384481140425	CCAATAAAA
chr10	15352431	15352432	chr10:15352432:A:C	rs17294023	A	C	A	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr10	15471990	15471991	chr10:15471991:T:C	rs7923056	T	C	T	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr10	15677747	15677748	chr10:15677748:T:C	rs3765584	T	C	T	Hoxd9.mouse_homeodomain_1	4	1	+	8.027213970992095	5.372167326129518	CACATAAAA
chr10	15755198	15755199	chr10:15755199:A:G	rs7905319	A	G	A	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr10	16405004	16405005	chr10:16405005:C:T	rs1334592	C	T	T	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr10	16483461	16483462	chr10:16483462:T:C	rs112426563	T	C	T	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr10	16854806	16854807	chr10:16854807:A:G	rs78749332	A	G	G	Hoxd9.mouse_homeodomain_1	7	1	+	7.212456609225008	0.5086306626332764	GCCATAAAG
chr10	16887610	16887611	chr10:16887611:G:A	rs6602162	G	A	G	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr10	16948937	16948938	chr10:16948938:C:T	rs11814421	C	T	C	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr10	16986631	16986632	chr10:16986632:G:A	rs74116794	G	A	G	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr10	17035648	17035649	chr10:17035649:C:T	rs74120112	C	T	C	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr10	17200482	17200483	chr10:17200483:T:C	rs72775087	T	C	T	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr10	17200487	17200488	chr10:17200488:G:C	rs116345316	G	C	G	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr10	17215958	17215959	chr10:17215959:C:T	rs75232481	C	T	C	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr10	17506609	17506610	chr10:17506610:G:C	rs61842148	G	C	G	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr10	17643341	17643342	chr10:17643342:T:A	rs2251710	T	A	T	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr10	17709589	17709590	chr10:17709590:G:A	rs17141543	G	A	A	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr10	17712812	17712813	chr10:17712813:A:G	rs2764804	A	G	A	Hoxd9.mouse_homeodomain_1	4	1	-	8.409487817756228	5.7544411728936495	CCCATTAAA
chr10	17859785	17859786	chr10:17859786:T:C	rs904252153	T	C	T	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr10	17923685	17923686	chr10:17923686:A:G	rs562790	A	G	A	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr10	17932707	17932708	chr10:17932708:T:C	rs690890	T	C	C	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr10	17932713	17932714	chr10:17932714:G:A	rs476542	G	A	A	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr10	17984242	17984243	chr10:17984243:G:A	rs78038225	G	A	G	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr10	18060510	18060511	chr10:18060511:G:A	rs191744358	G	A	G	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr10	18090358	18090359	chr10:18090359:A:G	rs7912811	A	G	A	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr10	18117463	18117464	chr10:18117464:T:C	rs12777104	T	C	T	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr10	18117487	18117488	chr10:18117488:C:G	rs12761528	C	G	C	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr10	18224768	18224769	chr10:18224769:G:A	rs1779213	G	A	A	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr10	19246334	19246335	chr10:19246335:G:T	rs73593858	G	T	G	Hoxd9.mouse_homeodomain_1	1	1	-	7.889898683853121	6.928093714955487	ACCATAAAA
chr10	19302535	19302536	chr10:19302536:G:A	rs34791488	G	A	G	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr10	19412756	19412757	chr10:19412757:C:T	chr10:19412757:C:T	C	T	C	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr10	19431781	19431782	chr10:19431782:A:T	rs2486054	A	T	A	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr10	19483483	19483484	chr10:19483484:G:A	rs2358407	G	A	G	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr10	19535976	19535977	chr10:19535977:T:G	rs11010274	T	G	T	Hoxd9.mouse_homeodomain_1	4	1	+	7.9772278588234515	1.1354094114928457	GCAATAAAA
chr10	19713209	19713210	chr10:19713210:T:C	rs638933	T	C	C	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr10	19782927	19782928	chr10:19782928:T:C	rs12775805	T	C	T	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr10	19999730	19999731	chr10:19999731:G:T	rs11011729	G	T	G	Hoxd9.mouse_homeodomain_1	1	1	-	7.9772278588234515	7.0154228899258175	GCAATAAAA
chr10	20095419	20095420	chr10:20095420:A:G	rs12240780	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	7.716978748812629	6.382900148950135	GACATAAAA
chr10	20300838	20300839	chr10:20300839:T:C	rs4748653	T	C	C	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr10	20927438	20927439	chr10:20927439:C:A	rs10508635	C	A	C	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr10	20936313	20936314	chr10:20936314:C:T	rs7098616	C	T	T	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr10	21084358	21084359	chr10:21084359:G:C	rs1123710	G	C	C	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr10	21292313	21292314	chr10:21292314:C:A	rs11012644	C	A	C	Hoxd9.mouse_homeodomain_1	1	1	+	8.099252595576761	7.137447626679127	GCCATTAAA
chr10	21328492	21328493	chr10:21328493:C:T	rs118079344	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	+	8.409487817756228	6.514940512447287	CCCATTAAA
chr10	21328518	21328519	chr10:21328519:T:C	rs7914447	T	C	C	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr10	21574921	21574922	chr10:21574922:C:G	rs527392937	C	G	C	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr10	21962450	21962451	chr10:21962451:T:C	rs2807967	T	C	C	Hoxd9.mouse_homeodomain_1	8	1	-	7.9772278588234515	6.510900750338196	GCAATAAAA
chr10	22016394	22016395	chr10:22016395:T:C	rs7080469	T	C	T	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr10	22301040	22301041	chr10:22301041:G:A	rs9665024	G	A	G	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr10	22438736	22438737	chr10:22438737:A:G	chr10:22438737:A:G	A	G	A	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr10	22438754	22438755	chr10:22438755:G:A	rs7911096	G	A	A	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr10	22702377	22702378	chr10:22702378:T:C	rs1181321907	T	C	T	Hoxd9.mouse_homeodomain_1	4	1	+	8.099252595576761	5.444205950714182	GCCATTAAA
chr10	22852145	22852146	chr10:22852146:C:T	rs118145215	C	T	c	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr10	23050082	23050083	chr10:23050083:A:G	rs74121716	A	G	G	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr10	23080491	23080492	chr10:23080492:C:T	rs722258	C	T	T	Hoxd9.mouse_homeodomain_1	2	1	+	7.45645131454733	0.9690108569236928	CCCATAAAC
chr10	23097225	23097226	chr10:23097226:T:G	rs3793757	T	G	G	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr10	23347488	23347489	chr10:23347489:A:T	rs2036921	A	T	T	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr10	23961144	23961145	chr10:23961145:G:A	rs4415652	G	A	A	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr10	23961150	23961151	chr10:23961151:C:T	rs4466724	C	T	T	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr10	24033796	24033797	chr10:24033797:C:T	rs7086464	C	T	T	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr10	24303834	24303835	chr10:24303835:G:A	rs220366	G	A	G	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr10	24393096	24393097	chr10:24393097:C:T	rs114090865	C	T	c	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr10	24468264	24468265	chr10:24468265:C:G	rs10828654	C	G	C	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr10	24483429	24483430	chr10:24483430:G:A	rs116865485	G	A	G	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr10	24514127	24514128	chr10:24514128:G:A	rs4748949	G	A	g	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr10	24891989	24891990	chr10:24891990:G:A	rs10828718	G	A	A	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr10	24970236	24970237	chr10:24970237:T:A	rs12250745	T	A	T	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr10	24981511	24981512	chr10:24981512:C:G	rs902903	C	G	C	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr10	25318013	25318014	chr10:25318014:T:C	rs67709672	T	C	C	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr10	25389259	25389260	chr10:25389260:C:G	rs117695744	C	G	C	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr10	25536999	25537000	chr10:25537000:A:T	rs140717619	A	T	A	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr10	25628833	25628834	chr10:25628834:G:A	rs12249396	G	A	A	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr10	25687622	25687623	chr10:25687623:A:G	rs11014676	A	G	A	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr10	26462073	26462074	chr10:26462074:T:C	rs3006809	T	C	T	Hoxd9.mouse_homeodomain_1	5	1	-	8.287463081002919	1.9132733627563638	CCAATAAAA
chr10	26462098	26462099	chr10:26462099:T:G	rs2065753	T	G	T	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr10	26683490	26683491	chr10:26683491:G:T	rs546229972	G	T	G	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr10	26683501	26683502	chr10:26683502:C:T	rs1748345	C	T	C	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr10	26737813	26737814	chr10:26737814:T:C	rs867375203	T	C	T	Hoxd9.mouse_homeodomain_1	5	1	-	8.027213970992095	1.6530242527455408	CACATAAAA
chr10	26880083	26880084	chr10:26880084:T:C	rs766117978	T	C	T	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr10	26906014	26906015	chr10:26906015:C:G	rs2797935	C	G	G	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr10	27242663	27242664	chr10:27242664:C:T	rs1831188	C	T	N	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr10	27257069	27257070	chr10:27257070:T:C	rs142389591	T	C	T	Hoxd9.mouse_homeodomain_1	6	1	-	7.716978748812629	1.0131528022208975	GACATAAAA
chr10	27345849	27345850	chr10:27345850:C:T	rs10829246	C	T	.	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr10	27541746	27541747	chr10:27541747:T:A	rs10829269	T	A	T	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr10	27547104	27547105	chr10:27547105:T:C	rs10829275	T	C	t	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr10	28344679	28344680	chr10:28344680:G:A	rs1840876	G	A	G	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr10	28344683	28344684	chr10:28344684:T:C	rs1840875	T	C	T	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr10	28423442	28423443	chr10:28423443:A:G	rs2368327	A	G	A	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr10	28595890	28595891	chr10:28595891:A:G	rs369793007	A	G	A	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr10	28645479	28645480	chr10:28645480:T:A	rs76632415	T	A	T	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr10	28674900	28674901	chr10:28674901:T:A	rs568710217	T	A	T	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr10	28704384	28704385	chr10:28704385:A:G	rs1379327538	A	G	A	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr10	28704871	28704872	chr10:28704872:G:T	rs11007202	G	T	G	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr10	28805028	28805029	chr10:28805029:A:G	rs1761984	A	G	G	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr10	28812259	28812260	chr10:28812260:C:T	rs1495677	C	T	c	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr10	28839957	28839958	chr10:28839958:T:C	rs72813806	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.287463081002919	6.953384481140425	CCAATAAAA
chr10	29058370	29058371	chr10:29058371:A:G	rs1414385	A	G	A	Hoxd9.mouse_homeodomain_1	8	1	+	7.716978748812629	6.250651640327374	GACATAAAA
chr10	29254617	29254618	chr10:29254618:G:A	chr10:29254618:G:A	G	A	G	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr10	29377945	29377946	chr10:29377946:T:C	rs7076307	T	C	t	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr10	29422590	29422591	chr10:29422591:C:T	rs4749421	C	T	C	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr10	29430223	29430224	chr10:29430224:T:A	rs113632303	T	A	T	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr10	29500303	29500304	chr10:29500304:C:T	rs190782672	C	T	C	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr10	29608997	29608998	chr10:29608998:A:C	rs4749469	A	C	A	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr10	29609017	29609018	chr10:29609018:A:T	rs1247428	A	T	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.98901893988973	6.985537803081085	CCCATAAAA
chr10	29627848	29627849	chr10:29627849:A:G	rs17768419	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.287463081002919	6.953384481140425	CCAATAAAA
chr10	29647402	29647403	chr10:29647403:G:T	rs12573620	G	T	G	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr10	29699638	29699639	chr10:29699639:G:A	rs1629457	G	A	G	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr10	29842075	29842076	chr10:29842076:C:T	rs535119278	C	T	C	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr10	29881629	29881630	chr10:29881630:T:C	rs149941268	T	C	T	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr10	30233707	30233708	chr10:30233708:A:G	rs139631836	A	G	A	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr10	30372455	30372456	chr10:30372456:A:G	rs74132579	A	G	.	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr10	30436019	30436020	chr10:30436020:C:T	rs192266556	C	T	C	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr10	30442730	30442731	chr10:30442731:G:T	rs8176984	G	T	G	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr10	30494906	30494907	chr10:30494907:G:T	rs143679183	G	T	G	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr10	30579646	30579647	chr10:30579647:C:T	rs10826825	C	T	C	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr10	30691507	30691508	chr10:30691508:C:T	rs115168452	C	T	c	Hoxd9.mouse_homeodomain_1	1	1	+	7.212456609225008	5.897654694892	GCCATAAAG
chr10	30791390	30791391	chr10:30791391:C:G	rs74135841	C	G	C	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr10	30929807	30929808	chr10:30929808:T:A	rs4483498	T	A	T	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr10	31262102	31262103	chr10:31262103:A:C	rs923824475	A	C	A	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr10	31395767	31395768	chr10:31395768:G:C	rs161279	G	C	C	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr10	31649272	31649273	chr10:31649273:G:T	rs11008567	G	T	G	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr10	31866363	31866364	chr10:31866364:A:G	rs567169457	A	G	A	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr10	31919249	31919250	chr10:31919250:T:C	rs145611896	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	6.943160709270972	5.60908210940848	CCCATTAAG
chr10	32104213	32104214	chr10:32104214:A:C	rs211408	A	C	A	Hoxd9.mouse_homeodomain_1	2	1	+	7.9772278588234515	8.678783717710262	GCAATAAAA
chr10	32122586	32122587	chr10:32122587:G:A	rs60146023	G	A	G	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr10	32156041	32156042	chr10:32156042:T:C	rs2998027	T	C	T	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr10	32218540	32218541	chr10:32218541:A:G	rs2769226	A	G	G	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr10	32362589	32362590	chr10:32362590:C:T	rs114810473	C	T	C	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr10	32895729	32895730	chr10:32895730:A:T	rs7914799	A	T	T	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr10	33032279	33032280	chr10:33032280:A:T	rs1187059	A	T	A	Hoxd9.mouse_homeodomain_1	4	1	-	7.716978748812629	0.875160301482023	GACATAAAA
chr10	33506551	33506552	chr10:33506552:T:G	rs2785245	T	G	T	Hoxd9.mouse_homeodomain_1	6	1	-	7.091711387329735	5.344627572488923	CCCATCAAA
chr10	33767027	33767028	chr10:33767028:A:G	rs944572	A	G	G	Hoxd9.mouse_homeodomain_1	4	1	-	7.091711387329735	4.436664742467157	CCCATCAAA
chr10	34058714	34058715	chr10:34058715:C:A	rs181472811	C	A	C	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr10	34125936	34125937	chr10:34125937:G:A	rs3004929	G	A	G	Hoxd9.mouse_homeodomain_1	2	1	-	7.34470511784777	0.8572646602241328	GCCGTAAAA
chr10	34157811	34157812	chr10:34157812:C:T	rs1274479	C	T	T	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr10	34383534	34383535	chr10:34383535:T:C	rs16935349	T	C	T	Hoxd9.mouse_homeodomain_1	4	1	+	7.241935125048919	4.5868884801863405	CCCATACAA
chr10	34473365	34473366	chr10:34473366:T:C	rs143541429	T	C	T	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr10	34473979	34473980	chr10:34473980:T:C	rs773995	T	C	T	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr10	34691952	34691953	chr10:34691953:C:T	rs10400190	C	T	c	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr10	34761644	34761645	chr10:34761645:T:C	rs11009923	T	C	C	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr10	34790236	34790237	chr10:34790237:G:T	rs7069244	G	T	T	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr10	34812305	34812306	chr10:34812306:C:T	rs76337648	C	T	C	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr10	35051027	35051028	chr10:35051028:C:T	rs2384286	C	T	C	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr10	35743537	35743538	chr10:35743538:T:C	rs16936290	T	C	T	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr10	35743539	35743540	chr10:35743540:C:T	rs570240430	C	T	C	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr10	35890133	35890134	chr10:35890134:T:A	rs112711541	T	A	T	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr10	35997872	35997873	chr10:35997873:G:A	rs1881152	G	A	G	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr10	36257161	36257162	chr10:36257162:G:A	rs74136036	G	A	G	Hoxd9.mouse_homeodomain_1	2	1	-	7.34470511784777	0.8572646602241328	GCCGTAAAA
chr10	36257166	36257167	chr10:36257167:T:G	chr10:36257167:T:G	T	G	T	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr10	36350205	36350206	chr10:36350206:C:G	rs17627013	C	G	C	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr10	36504813	36504814	chr10:36504814:A:G	rs7911626	A	G	A	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr10	36560497	36560498	chr10:36560498:G:T	rs1537326	G	T	T	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr10	36608216	36608217	chr10:36608217:T:C	rs7917395	T	C	T	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr10	36725379	36725380	chr10:36725380:C:T	rs16937227	C	T	T	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr10	37290097	37290098	chr10:37290098:G:A	rs7096361	G	A	A	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr10	37619333	37619334	chr10:37619334:T:G	rs4934592	T	G	t	Hoxd9.mouse_homeodomain_1	8	1	-	8.027213970992095	6.494646345649697	CACATAAAA
chr10	37975478	37975479	chr10:37975479:C:T	rs149632607	C	T	C	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr10	37975514	37975515	chr10:37975515:T:C	rs74754810	T	C	T	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr10	38354734	38354735	chr10:38354735:T:C	rs2804639	T	C	.	Hoxd9.mouse_homeodomain_1	5	1	+	6.943160709270972	5.6253842788444794	CCCATTAAG
chr10	38605039	38605040	chr10:38605040:G:A	rs10870442	G	A	.	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr10	38959254	38959255	chr10:38959255:C:T	rs1369847630	C	T	.	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr10	39006649	39006650	chr10:39006650:C:T	rs879014715	C	T	.	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr10	39475631	39475632	chr10:39475632:C:G	rs1348840733	C	G	.	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr10	39544358	39544359	chr10:39544359:G:A	rs1464603004	G	A	.	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr10	39544525	39544526	chr10:39544526:T:A	rs1321557614	T	A	.	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr10	42149990	42149991	chr10:42149991:G:C	rs61847200	G	C	.	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr10	42150013	42150014	chr10:42150014:A:G	rs72785922	A	G	.	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr10	42641845	42641846	chr10:42641846:T:A	rs12268549	T	A	T	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr10	42867029	42867030	chr10:42867030:C:T	rs147266619	C	T	C	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr10	43123123	43123124	chr10:43123124:C:T	rs77761104	C	T	C	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr10	43350609	43350610	chr10:43350610:A:G	rs2248638	A	G	A	Hoxd9.mouse_homeodomain_1	5	1	+	7.522691831404475	1.1485021131579192	CCCATAAAG
chr10	43400551	43400552	chr10:43400552:G:A	rs10899799	G	A	A	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr10	43607360	43607361	chr10:43607361:A:G	rs553633331	A	G	A	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr10	43750277	43750278	chr10:43750278:A:T	rs75156638	A	T	A	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr10	43750295	43750296	chr10:43750296:C:T	rs73268466	C	T	C	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr10	43783499	43783500	chr10:43783500:T:C	rs10751345	T	C	C	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr10	43883235	43883236	chr10:43883236:G:T	rs72781128	G	T	G	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr10	43950560	43950561	chr10:43950561:T:C	rs1380838	T	C	C	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr10	43955907	43955908	chr10:43955908:C:A	rs2764796	C	A	C	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr10	44014171	44014172	chr10:44014172:G:C	rs10899968	G	C	G	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr10	44066473	44066474	chr10:44066474:G:A	rs17155040	G	A	G	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr10	44071529	44071530	chr10:44071530:G:T	rs79544393	G	T	G	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr10	44105889	44105890	chr10:44105890:C:T	rs12766571	C	T	C	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr10	44298828	44298829	chr10:44298829:C:T	rs1436927	C	T	c	Hoxd9.mouse_homeodomain_1	1	1	+	7.45645131454733	6.141649400214323	CCCATAAAC
chr10	44326323	44326324	chr10:44326324:C:T	rs1111259	C	T	C	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr10	44511269	44511270	chr10:44511270:T:C	rs72795016	T	C	T	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr10	44519745	44519746	chr10:44519746:A:G	rs10793541	A	G	G	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr10	44794092	44794093	chr10:44794093:G:A	rs56009362	G	A	G	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr10	45224733	45224734	chr10:45224734:A:G	rs1890735	A	G	G	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr10	45592443	45592444	chr10:45592444:G:A	rs11239571	G	A	G	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr10	46021209	46021210	chr10:46021210:T:C	rs546793073	T	C	T	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr10	46021215	46021216	chr10:46021216:A:G	rs10761618	A	G	A	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr10	46048931	46048932	chr10:46048932:C:T	rs73318172	C	T	c	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr10	46229497	46229498	chr10:46229498:C:T	rs370211581	C	T	c	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr10	46551734	46551735	chr10:46551735:C:A	rs6587513	C	A	C	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr10	47109999	47110000	chr10:47110000:C:T	rs78566220	C	T	C	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr10	47174033	47174034	chr10:47174034:C:T	rs11592460	C	T	C	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr10	47278278	47278279	chr10:47278279:T:C	rs9325887	T	C	C	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr10	47293325	47293326	chr10:47293326:T:C	rs1902714	T	C	G	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr10	48196969	48196970	chr10:48196970:T:C	rs56036047	T	C	T	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr10	48364168	48364169	chr10:48364169:A:C	rs73296755	A	C	C	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr10	48443064	48443065	chr10:48443065:C:G	rs11599396	C	G	C	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr10	48443069	48443070	chr10:48443070:C:T	rs10857567	C	T	C	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr10	48451799	48451800	chr10:48451800:G:A	rs3813864	G	A	G	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr10	48508770	48508771	chr10:48508771:G:C	rs11101352	G	C	G	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr10	48532840	48532841	chr10:48532841:T:C	rs10857595	T	C	T	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr10	48701070	48701071	chr10:48701071:C:T	rs10857622	C	T	C	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr10	48913276	48913277	chr10:48913277:G:A	rs2663055	G	A	G	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr10	48976437	48976438	chr10:48976438:T:A	rs1107405	T	A	A	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr10	49109603	49109604	chr10:49109604:T:C	rs4073712	T	C	C	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr10	49109605	49109606	chr10:49109606:A:G	rs4073711	A	G	A	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr10	49264734	49264735	chr10:49264735:G:A	rs10745256	G	A	G	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr10	49285296	49285297	chr10:49285297:G:A	rs4440951	G	A	G	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr10	49327949	49327950	chr10:49327950:G:A	rs4623813	G	A	G	Hoxd9.mouse_homeodomain_1	1	1	-	8.099252595576761	6.784450681243753	GCCATTAAA
chr10	49327953	49327954	chr10:49327954:G:A	rs527457617	G	A	G	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr10	49666391	49666392	chr10:49666392:C:T	rs372726737	C	T	C	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr10	49831389	49831390	chr10:49831390:T:C	rs17719813	T	C	T	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr10	50174755	50174756	chr10:50174756:C:G	rs2813205	C	G	C	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr10	50219700	50219701	chr10:50219701:A:T	rs1037537185	A	T	T	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr10	50323299	50323300	chr10:50323300:A:G	rs2842096	A	G	G	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr10	50508288	50508289	chr10:50508289:G:T	rs16937786	G	T	G	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr10	50625736	50625737	chr10:50625737:A:C	chr10:50625737:A:C	A	C	A	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr10	50987830	50987831	chr10:50987831:A:T	rs6479834	A	T	A	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr10	51029174	51029175	chr10:51029175:A:T	rs541280087	A	T	A	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr10	51118190	51118191	chr10:51118191:A:G	rs7897669	A	G	a	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr10	51246435	51246436	chr10:51246436:T:C	rs10996310	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.287463081002919	6.953384481140425	CCAATAAAA
chr10	51319524	51319525	chr10:51319525:G:C	rs7921782	G	C	G	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr10	51487813	51487814	chr10:51487814:A:G	rs17540215	A	G	A	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr10	51629808	51629809	chr10:51629809:G:A	rs7907545	G	A	A	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr10	51877788	51877789	chr10:51877789:C:T	rs17631875	C	T	T	Hoxd9.mouse_homeodomain_1	0	1	+	7.522691831404475	5.628144526095533	CCCATAAAG
chr10	52019719	52019720	chr10:52019720:C:G	rs10823973	C	G	C	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr10	52064080	52064081	chr10:52064081:C:A	rs74981134	C	A	C	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr10	52112983	52112984	chr10:52112984:G:A	rs2219749	G	A	G	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr10	52409623	52409624	chr10:52409624:G:A	rs1194649	G	A	G	Hoxd9.mouse_homeodomain_1	8	1	-	7.45645131454733	6.056505815123662	CCCATAAAC
chr10	52491222	52491223	chr10:52491223:G:T	rs1660794	G	T	G	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr10	52646179	52646180	chr10:52646180:C:G	rs10762856	C	G	C	Hoxd9.mouse_homeodomain_1	2	1	+	8.027213970992095	4.559222313539767	CACATAAAA
chr10	52704139	52704140	chr10:52704140:C:A	rs7088220	C	A	C	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr10	52821741	52821742	chr10:52821742:T:C	rs12769298	T	C	T	Hoxd9.mouse_homeodomain_1	4	1	+	8.98901893988973	6.333972295027152	CCCATAAAA
chr10	52932860	52932861	chr10:52932861:T:G	rs16935459	T	G	T	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr10	53000963	53000964	chr10:53000964:T:C	rs10740531	T	C	T	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr10	53091164	53091165	chr10:53091165:C:T	rs79301467	C	T	C	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr10	53155652	53155653	chr10:53155653:G:A	rs10824916	G	A	G	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr10	53356833	53356834	chr10:53356834:C:T	rs192613091	C	T	C	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr10	53356834	53356835	chr10:53356835:A:C	rs112466057	A	C	A	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr10	53356854	53356855	chr10:53356855:T:C	rs61859790	T	C	T	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr10	53490390	53490391	chr10:53490391:T:C	rs7913433	T	C	C	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr10	53638002	53638003	chr10:53638003:T:C	rs34175546	T	C	T	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr10	53638004	53638005	chr10:53638005:C:A	rs35957518	C	A	A	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr10	53675406	53675407	chr10:53675407:G:A	rs745543	G	A	G	Hoxd9.mouse_homeodomain_1	1	1	-	7.889898683853121	6.575096769520114	ACCATAAAA
chr10	53699318	53699319	chr10:53699319:C:T	rs79518549	C	T	C	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr10	53840087	53840088	chr10:53840088:G:A	rs4519000	G	A	G	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr10	53886883	53886884	chr10:53886884:G:A	rs41487044	G	A	A	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr10	53998260	53998261	chr10:53998261:C:T	rs11003984	C	T	C	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr10	54095057	54095058	chr10:54095058:T:C	rs749850663	T	C	T	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr10	54130606	54130607	chr10:54130607:G:A	rs7904409	G	A	a	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr10	54304187	54304188	chr10:54304188:C:T	rs7919725	C	T	T	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr10	54815636	54815637	chr10:54815637:G:A	rs1352532123	G	A	G	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr10	55670385	55670386	chr10:55670386:T:G	rs7922805	T	G	T	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr10	55709509	55709510	chr10:55709510:G:C	rs10825582	G	C	G	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr10	56176094	56176095	chr10:56176095:C:T	rs2393006	C	T	T	Hoxd9.mouse_homeodomain_1	0	1	-	7.9772278588234515	7.188342824966311	GCAATAAAA
chr10	56294048	56294049	chr10:56294049:G:T	rs3861045	G	T	T	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr10	56496915	56496916	chr10:56496916:T:C	rs35540707	T	C	T	Hoxd9.mouse_homeodomain_1	4	1	+	8.409487817756228	5.7544411728936495	CCCATTAAA
chr10	56697363	56697364	chr10:56697364:C:T	rs67784326	C	T	C	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr10	57044926	57044927	chr10:57044927:T:A	rs7096290	T	A	T	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr10	57106188	57106189	chr10:57106189:A:G	rs12252740	A	G	A	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr10	57106744	57106745	chr10:57106745:T:C	rs11005638	T	C	T	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr10	57612871	57612872	chr10:57612872:A:G	rs2393367	A	G	A	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr10	57772390	57772391	chr10:57772391:G:A	rs4935722	G	A	A	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr10	58065365	58065366	chr10:58065366:A:T	rs568879929	A	T	A	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr10	58268487	58268488	chr10:58268488:G:A	rs1832556	G	A	A	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr10	58282549	58282550	chr10:58282550:T:C	rs189230733	T	C	T	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr10	58299880	58299881	chr10:58299881:T:C	rs2590289	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.287463081002919	6.953384481140425	CCAATAAAA
chr10	58469203	58469204	chr10:58469204:G:A	rs61875518	G	A	A	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr10	58554514	58554515	chr10:58554515:G:A	rs1620186	G	A	G	Hoxd9.mouse_homeodomain_1	1	1	-	7.889898683853121	6.575096769520114	ACCATAAAA
chr10	58819109	58819110	chr10:58819110:A:G	rs922644782	A	G	A	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr10	58963208	58963209	chr10:58963209:A:G	rs181001131	A	G	A	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr10	58970689	58970690	chr10:58970690:G:A	rs282664	G	A	A	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr10	58999380	58999381	chr10:58999381:G:T	rs11597180	G	T	G	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr10	59099823	59099824	chr10:59099824:G:A	rs16913129	G	A	G	Hoxd9.mouse_homeodomain_1	2	1	-	8.678783717710262	2.1913432600866263	GCCATAAAA
chr10	59148707	59148708	chr10:59148708:C:A	rs987059	C	A	A	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr10	59388153	59388154	chr10:59388154:T:C	rs11006467	T	C	T	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr10	59450792	59450793	chr10:59450793:A:C	rs12772551	A	C	C	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr10	59578028	59578029	chr10:59578029:C:T	rs7082987	C	T	C	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr10	59623917	59623918	chr10:59623918:G:A	rs112429437	G	A	G	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr10	59674344	59674345	chr10:59674345:C:A	rs75028536	C	A	C	Hoxd9.mouse_homeodomain_1	0	1	-	7.1462160923678635	5.561904009238388	GCCATAAAC
chr10	59904062	59904063	chr10:59904063:T:G	rs529891532	T	G	T	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr10	59962563	59962564	chr10:59962564:G:T	rs1684907	G	T	T	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr10	60041643	60041644	chr10:60041644:G:T	rs2393582	G	T	T	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr10	60041764	60041765	chr10:60041765:C:T	rs4431977	C	T	T	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr10	60067455	60067456	chr10:60067456:C:T	rs114719963	C	T	C	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr10	60238197	60238198	chr10:60238198:A:G	rs10821707	A	G	G	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr10	60375462	60375463	chr10:60375463:T:G	rs187250308	T	G	T	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr10	60375498	60375499	chr10:60375499:G:A	rs75396339	G	A	G	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr10	60385042	60385043	chr10:60385043:T:C	rs72806131	T	C	C	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr10	60474329	60474330	chr10:60474330:C:A	rs117589455	C	A	c	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr10	60474350	60474351	chr10:60474351:G:C	rs1938533	G	C	c	Hoxd9.mouse_homeodomain_1	0	1	-	7.522691831404475	7.212456609225008	CCCATAAAG
chr10	60500342	60500343	chr10:60500343:A:T	rs10821776	A	T	A	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr10	60560571	60560572	chr10:60560572:G:A	rs2068043	G	A	G	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr10	60798771	60798772	chr10:60798772:G:T	rs2448354	G	T	T	Hoxd9.mouse_homeodomain_1	2	1	-	8.027213970992095	7.325658112105286	CACATAAAA
chr10	60894572	60894573	chr10:60894573:T:G	rs7083267	T	G	T	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr10	60978190	60978191	chr10:60978191:G:T	rs10994587	G	T	G	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr10	61165407	61165408	chr10:61165408:C:T	rs140683177	C	T	C	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr10	61399652	61399653	chr10:61399653:G:A	rs552592373	G	A	G	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr10	61448949	61448950	chr10:61448950:A:G	rs117495209	A	G	A	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr10	61448957	61448958	chr10:61448958:G:A	rs72825291	G	A	G	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr10	61608569	61608570	chr10:61608570:G:C	rs2606099	G	C	C	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr10	61709043	61709044	chr10:61709044:A:G	chr10:61709044:A:G	A	G	A	Hoxd9.mouse_homeodomain_1	4	1	-	7.889898683853121	5.234852038990543	ACCATAAAA
chr10	61709505	61709506	chr10:61709506:T:C	rs10994886	T	C	T	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr10	61868117	61868118	chr10:61868118:G:A	rs189745781	G	A	G	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr10	61992750	61992751	chr10:61992751:A:G	rs149590676	A	G	A	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr10	62016193	62016194	chr10:62016194:A:G	rs12217912	A	G	A	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr10	62025329	62025330	chr10:62025330:G:T	rs10821944	G	T	G	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr10	62080302	62080303	chr10:62080303:T:C	rs4948503	T	C	C	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr10	62087524	62087525	chr10:62087525:T:C	rs7903722	T	C	T	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr10	62114065	62114066	chr10:62114066:T:C	rs138329793	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.1462160923678635	5.81213749250537	GCCATAAAC
chr10	62503642	62503643	chr10:62503643:C:G	rs4746409	C	G	C	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr10	62512856	62512857	chr10:62512857:G:A	rs16917327	G	A	G	Hoxd9.mouse_homeodomain_1	0	1	+	7.716978748812629	6.928093714955487	GACATAAAA
chr10	62520422	62520423	chr10:62520423:G:C	rs10733779	G	C	G	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr10	62545850	62545851	chr10:62545851:A:G	rs148482214	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	7.9772278588234515	6.643149258960959	GCAATAAAA
chr10	62706890	62706891	chr10:62706891:T:C	rs11599754	T	C	T	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr10	62860890	62860891	chr10:62860891:A:G	rs181560599	A	G	A	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr10	62916262	62916263	chr10:62916263:C:A	rs145945869	C	A	C	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr10	63224786	63224787	chr10:63224787:G:C	rs72829185	G	C	G	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr10	63236488	63236489	chr10:63236489:C:T	rs77731585	C	T	C	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr10	63521039	63521040	chr10:63521040:A:G	rs138631212	A	G	A	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr10	63553669	63553670	chr10:63553670:G:A	rs72837089	G	A	G	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr10	63629647	63629648	chr10:63629648:T:C	rs183602733	T	C	T	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr10	63667024	63667025	chr10:63667025:G:A	rs36080042	G	A	G	Hoxd9.mouse_homeodomain_1	0	1	-	8.409487817756228	6.514940512447287	CCCATTAAA
chr10	63667038	63667039	chr10:63667039:G:C	rs76404637	G	C	G	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr10	63704265	63704266	chr10:63704266:C:G	rs16918799	C	G	C	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr10	63907492	63907493	chr10:63907493:A:G	rs7086527	A	G	A	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr10	64070556	64070557	chr10:64070557:C:T	rs2578014	C	T	C	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr10	64503477	64503478	chr10:64503478:C:G	rs12571924	C	G	C	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr10	64871884	64871885	chr10:64871885:G:A	rs113242557	G	A	G	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr10	64906315	64906316	chr10:64906316:G:T	rs7922220	G	T	G	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr10	64906387	64906388	chr10:64906388:C:T	rs2962753	C	T	C	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr10	65106406	65106407	chr10:65106407:T:C	rs6480036	T	C	t	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr10	65110245	65110246	chr10:65110246:A:G	rs10996217	A	G	g	Hoxd9.mouse_homeodomain_1	8	1	+	8.678783717710262	7.212456609225008	GCCATAAAA
chr10	65205383	65205384	chr10:65205384:T:A	rs12248994	T	A	T	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr10	65234533	65234534	chr10:65234534:G:C	rs111639117	G	C	G	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr10	65328681	65328682	chr10:65328682:C:T	rs10996334	C	T	C	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr10	65406703	65406704	chr10:65406704:T:G	rs74840636	T	G	T	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr10	65476126	65476127	chr10:65476127:G:A	rs10996457	G	A	G	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr10	65941583	65941584	chr10:65941584:C:A	rs74140878	C	A	c	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr10	66244716	66244717	chr10:66244717:A:G	rs10997006	A	G	G	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr10	66587299	66587300	chr10:66587300:T:A	rs10997251	T	A	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.409487817756228	6.406006680947584	CCCATTAAA
chr10	66900348	66900349	chr10:66900349:A:G	rs7896296	A	G	a	Hoxd9.mouse_homeodomain_1	3	1	+	8.287463081002919	6.953384481140425	CCAATAAAA
chr10	66930129	66930130	chr10:66930130:T:A	rs111645306	T	A	T	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr10	66941615	66941616	chr10:66941616:T:A	rs61866209	T	A	T	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr10	67003926	67003927	chr10:67003927:T:C	rs1925615	T	C	C	Hoxd9.mouse_homeodomain_1	7	1	-	7.9772278588234515	1.2734019122317202	GCAATAAAA
chr10	67088490	67088491	chr10:67088491:C:A	rs2394343	C	A	A	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr10	67172462	67172463	chr10:67172463:G:T	rs76967689	G	T	G	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr10	67658511	67658512	chr10:67658512:G:A	rs7076484	G	A	G	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr10	67753660	67753661	chr10:67753661:G:A	rs138146404	G	A	G	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr10	68106899	68106900	chr10:68106900:T:C	rs11592680	T	C	T	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr10	68419955	68419956	chr10:68419956:C:G	rs7912227	C	G	-	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr10	68527696	68527697	chr10:68527697:T:C	rs115363954	T	C	T	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr10	68527710	68527711	chr10:68527711:G:A	rs116779103	G	A	G	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr10	68666073	68666074	chr10:68666074:G:A	rs150764876	G	A	G	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr10	68795193	68795194	chr10:68795194:T:C	rs1163202	T	C	C	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr10	68810502	68810503	chr10:68810503:C:T	rs1163147	C	T	C	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr10	68861565	68861566	chr10:68861566:G:C	rs77040825	G	C	g	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr10	68865926	68865927	chr10:68865927:C:T	rs111484529	C	T	C	Hoxd9.mouse_homeodomain_1	3	1	-	7.075409217893736	8.409487817756228	CCCGTTAAA
chr10	68966732	68966733	chr10:68966733:G:A	rs116969388	G	A	G	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr10	69090919	69090920	chr10:69090920:A:G	rs17558167	A	G	G	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr10	69255041	69255042	chr10:69255042:G:A	rs77380489	G	A	G	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr10	69279550	69279551	chr10:69279551:C:T	rs78792424	C	T	C	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr10	69282003	69282004	chr10:69282004:C:G	rs12253706	C	G	C	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr10	69282049	69282050	chr10:69282050:G:T	rs4746834	G	T	G	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr10	69326158	69326159	chr10:69326159:T:C	rs11812380	T	C	C	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr10	69349649	69349650	chr10:69349650:T:C	rs6480404	T	C	C	Hoxd9.mouse_homeodomain_1	4	1	+	8.027213970992095	5.372167326129518	CACATAAAA
chr10	69475292	69475293	chr10:69475293:G:A	rs73275738	G	A	G	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr10	69518710	69518711	chr10:69518711:C:T	rs61848440	C	T	C	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr10	69600664	69600665	chr10:69600665:A:G	rs12243829	A	G	A	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr10	69678125	69678126	chr10:69678126:C:T	rs12761768	C	T	C	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr10	69721601	69721602	chr10:69721602:G:A	rs35762727	G	A	G	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr10	69783841	69783842	chr10:69783842:T:G	rs2394598	T	G	T	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr10	69783844	69783845	chr10:69783845:G:A	rs2394599	G	A	G	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr10	69817051	69817052	chr10:69817052:A:G	rs4746006	A	G	A	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr10	69819758	69819759	chr10:69819759:G:A	rs10998986	G	A	G	Hoxd9.mouse_homeodomain_1	1	1	-	7.212456609225008	5.897654694892	GCCATAAAG
chr10	69938635	69938636	chr10:69938636:G:A	rs3793822	G	A	G	Hoxd9.mouse_homeodomain_1	0	1	+	7.212456609225008	6.423571575367866	GCCATAAAG
chr10	70147496	70147497	chr10:70147497:C:T	chr10:70147497:C:T	C	T	C	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr10	70295254	70295255	chr10:70295255:T:C	rs61060729	T	C	C	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr10	70466678	70466679	chr10:70466679:G:A	chr10:70466679:G:A	G	A	G	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr10	70551697	70551698	chr10:70551698:A:G	rs870459	A	G	A	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr10	70551725	70551726	chr10:70551726:A:G	rs881823	A	G	G	Hoxd9.mouse_homeodomain_1	8	1	+	7.9772278588234515	6.510900750338196	GCAATAAAA
chr10	70657309	70657310	chr10:70657310:A:G	rs16927761	A	G	A	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr10	70660161	70660162	chr10:70660162:T:C	rs10999458	T	C	T	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr10	70679779	70679780	chr10:70679780:C:A	rs967423262	C	A	C	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr10	70679791	70679792	chr10:70679792:C:A	rs934034066	C	A	C	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr10	70679980	70679981	chr10:70679981:C:G	rs72814514	C	G	G	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr10	70684373	70684374	chr10:70684374:C:T	rs7894723	C	T	C	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr10	70740601	70740602	chr10:70740602:G:A	rs72814587	G	A	G	Hoxd9.mouse_homeodomain_1	8	1	-	7.45645131454733	6.056505815123662	CCCATAAAC
chr10	70976078	70976079	chr10:70976079:G:A	rs10823648	G	A	G	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr10	70985617	70985618	chr10:70985618:G:A	rs2039730	G	A	A	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr10	71236401	71236402	chr10:71236402:C:A	rs115068292	C	A	C	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr10	71396112	71396113	chr10:71396113:T:G	rs74415395	T	G	T	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr10	71476050	71476051	chr10:71476051:C:T	rs10999841	C	T	T	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr10	71586112	71586113	chr10:71586113:T:C	rs4747169	T	C	C	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr10	71666463	71666464	chr10:71666464:C:T	rs56380861	C	T	C	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr10	71753066	71753067	chr10:71753067:C:G	rs57732552	C	G	C	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr10	71757095	71757096	chr10:71757096:C:T	rs10999985	C	T	C	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr10	71812007	71812008	chr10:71812008:T:C	rs45583140	T	C	t	Hoxd9.mouse_homeodomain_1	8	1	-	7.091711387329735	5.6253842788444794	CCCATCAAA
chr10	71865120	71865121	chr10:71865121:T:C	rs59150417	T	C	T	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr10	71889710	71889711	chr10:71889711:T:C	chr10:71889711:T:C	T	C	T	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr10	71894904	71894905	chr10:71894905:G:A	rs58766948	G	A	A	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr10	71905892	71905893	chr10:71905893:A:G	rs4747217	A	G	A	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr10	71984711	71984712	chr10:71984712:C:T	rs2394847	C	T	T	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr10	72171805	72171806	chr10:72171806:T:G	rs11000201	T	G	T	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr10	72309590	72309591	chr10:72309591:T:C	rs74145711	T	C	C	Hoxd9.mouse_homeodomain_1	3	1	-	7.1462160923678635	5.81213749250537	GCCATAAAC
chr10	72385048	72385049	chr10:72385049:C:T	rs148776375	C	T	C	Hoxd9.mouse_homeodomain_1	2	1	+	8.027213970992095	1.5397735133684596	CACATAAAA
chr10	72491033	72491034	chr10:72491034:G:A	rs7912170	G	A	G	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr10	72821838	72821839	chr10:72821839:A:T	rs2121097	A	T	T	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr10	73092240	73092241	chr10:73092241:A:G	rs79646121	A	G	A	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr10	73785465	73785466	chr10:73785466:A:T	rs577947937	A	T	A	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr10	73785492	73785493	chr10:73785493:A:G	rs12256103	A	G	G	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr10	73913972	73913973	chr10:73913973:C:T	rs2227566	C	T	C	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr10	73930509	73930510	chr10:73930510:A:G	rs2633317	A	G	A	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr10	74233378	74233379	chr10:74233379:T:C	chr10:74233379:T:C	T	C	T	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr10	74282489	74282490	chr10:74282490:C:T	rs10824139	C	T	C	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr10	74640741	74640742	chr10:74640742:T:G	rs4746213	T	G	T	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr10	74684328	74684329	chr10:74684329:C:T	rs7071324	C	T	T	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr10	74858098	74858099	chr10:74858099:C:T	rs12254441	C	T	C	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr10	75569513	75569514	chr10:75569514:G:T	rs4746308	G	T	G	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr10	75611491	75611492	chr10:75611492:A:T	rs74147137	A	T	A	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr10	75663242	75663243	chr10:75663243:C:T	rs113685659	C	T	C	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr10	76019139	76019140	chr10:76019140:G:A	rs2395334	G	A	A	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr10	76232748	76232749	chr10:76232749:A:G	rs116861773	A	G	G	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr10	76391436	76391437	chr10:76391437:A:T	rs1873462	A	T	T	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr10	76435032	76435033	chr10:76435033:T:C	rs1907349	T	C	C	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr10	76435053	76435054	chr10:76435054:A:G	rs1907350	A	G	G	Hoxd9.mouse_homeodomain_1	7	1	+	7.45645131454733	0.752625367955599	CCCATAAAC
chr10	76455027	76455028	chr10:76455028:C:T	rs16933554	C	T	C	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr10	76649905	76649906	chr10:76649906:C:G	rs714553	C	G	G	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr10	76665166	76665167	chr10:76665167:A:G	rs73278830	A	G	G	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr10	76775564	76775565	chr10:76775565:C:A	rs846634	C	A	A	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr10	76945591	76945592	chr10:76945592:G:C	rs12413674	G	C	G	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr10	77016466	77016467	chr10:77016467:G:C	rs79984339	G	C	G	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr10	77139645	77139646	chr10:77139646:C:T	rs1871063	C	T	C	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr10	77157790	77157791	chr10:77157791:G:A	rs76067448	G	A	G	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr10	77234947	77234948	chr10:77234948:G:A	rs10824497	G	A	G	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr10	77234958	77234959	chr10:77234959:C:T	rs527706	C	T	T	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr10	77234995	77234996	chr10:77234996:C:T	rs579143	C	T	T	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr10	77252629	77252630	chr10:77252630:T:C	rs61868371	T	C	C	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr10	77315812	77315813	chr10:77315813:A:G	rs672735	A	G	G	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr10	77320983	77320984	chr10:77320984:C:T	chr10:77320984:C:T	C	T	C	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr10	77574702	77574703	chr10:77574703:T:C	rs34270751	T	C	T	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr10	77576835	77576836	chr10:77576836:T:C	rs2673416	T	C	C	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr10	78277665	78277666	chr10:78277666:C:G	rs7071635	C	G	C	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr10	78358449	78358450	chr10:78358450:A:G	rs75492451	A	G	a	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr10	78455529	78455530	chr10:78455530:C:G	rs919888	C	G	C	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr10	78492022	78492023	chr10:78492023:C:T	rs66949455	C	T	C	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr10	78693690	78693691	chr10:78693691:A:C	rs252822	A	C	C	Hoxd9.mouse_homeodomain_1	5	1	+	8.98901893988973	7.091711387329735	CCCATAAAA
chr10	78698399	78698400	chr10:78698400:G:T	rs3910297	G	T	G	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr10	78939113	78939114	chr10:78939114:T:C	rs7897711	T	C	C	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr10	79050784	79050785	chr10:79050785:G:A	rs117246687	G	A	G	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr10	79315350	79315351	chr10:79315351:G:A	rs45448995	G	A	G	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr10	79488810	79488811	chr10:79488811:T:C	rs61860464	T	C	.	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr10	79745015	79745016	chr10:79745016:T:G	rs2983833	T	G	g	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr10	79936334	79936335	chr10:79936335:G:A	rs17885031	G	A	G	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr10	80203940	80203941	chr10:80203941:A:T	rs75831912	A	T	a	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr10	80279022	80279023	chr10:80279023:G:A	rs4934028	G	A	G	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr10	80497415	80497416	chr10:80497416:A:C	rs200753570	A	C	A	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr10	80497418	80497419	chr10:80497419:G:A	rs7902097	G	A	G	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr10	80499139	80499140	chr10:80499140:A:T	chr10:80499140:A:T	A	T	A	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr10	80613038	80613039	chr10:80613039:C:T	rs4934371	C	T	C	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr10	80761317	80761318	chr10:80761318:T:C	rs4934479	T	C	C	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr10	81286946	81286947	chr10:81286947:T:A	rs12359312	T	A	T	Hoxd9.mouse_homeodomain_1	8	1	-	8.027213970992095	5.094700846226028	CACATAAAA
chr10	81315731	81315732	chr10:81315732:A:G	rs265454	A	G	A	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr10	81450912	81450913	chr10:81450913:C:T	rs197775	C	T	C	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr10	81505767	81505768	chr10:81505768:C:T	rs563403787	C	T	C	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr10	81796049	81796050	chr10:81796050:T:C	rs10786676	T	C	C	Hoxd9.mouse_homeodomain_1	3	1	-	8.027213970992095	6.693135371129603	CACATAAAA
chr10	81833171	81833172	chr10:81833172:C:A	rs10786723	C	A	C	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr10	82654356	82654357	chr10:82654357:A:T	rs17100420	A	T	A	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr10	82686060	82686061	chr10:82686061:A:G	rs2095502	A	G	A	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr10	83013156	83013157	chr10:83013157:C:G	rs1270986128	C	G	C	Hoxd9.mouse_homeodomain_1	0	1	+	6.943160709270972	6.632925487091506	CCCATTAAG
chr10	83166007	83166008	chr10:83166008:A:G	rs7067861	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.287463081002919	6.953384481140425	CCAATAAAA
chr10	83274689	83274690	chr10:83274690:C:T	rs79016769	C	T	C	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr10	83517738	83517739	chr10:83517739:G:A	rs4933924	G	A	G	Hoxd9.mouse_homeodomain_1	2	1	-	8.099252595576761	1.6118121379531245	GCCATTAAA
chr10	83517752	83517753	chr10:83517753:C:A	rs1324251	C	A	C	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr10	83522528	83522529	chr10:83522529:C:T	rs2349176	C	T	C	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr10	83657530	83657531	chr10:83657531:G:A	rs12266607	G	A	G	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr10	83867027	83867028	chr10:83867028:G:A	rs7901096	G	A	G	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr10	83987313	83987314	chr10:83987314:G:A	rs10887194	G	A	G	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr10	84231326	84231327	chr10:84231327:A:G	rs7909901	A	G	G	Hoxd9.mouse_homeodomain_1	3	1	+	7.091711387329735	5.757632787467242	CCCATCAAA
chr10	84395853	84395854	chr10:84395854:T:C	rs11595121	T	C	C	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr10	84517199	84517200	chr10:84517200:C:T	rs1050943	C	T	T	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr10	84528741	84528742	chr10:84528742:T:C	rs143005444	T	C	T	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr10	84531455	84531456	chr10:84531456:T:C	rs34307864	T	C	t	Hoxd9.mouse_homeodomain_1	3	1	-	7.716978748812629	6.382900148950135	GACATAAAA
chr10	84707540	84707541	chr10:84707541:T:C	rs2505776	T	C	t	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr10	84902206	84902207	chr10:84902207:A:C	rs10887395	A	C	C	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr10	84906640	84906641	chr10:84906641:C:T	rs4468290	C	T	T	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr10	85152880	85152881	chr10:85152881:A:G	rs12762398	A	G	A	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr10	85189456	85189457	chr10:85189457:A:G	rs1856660	A	G	A	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr10	85524533	85524534	chr10:85524534:T:C	rs115323077	T	C	T	Hoxd9.mouse_homeodomain_1	4	1	+	8.678783717710262	6.023737072847684	GCCATAAAA
chr10	85524549	85524550	chr10:85524550:C:T	rs145970480	C	T	C	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr10	85642201	85642202	chr10:85642202:T:C	rs34352127	T	C	T	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr10	85643801	85643802	chr10:85643802:C:T	rs4372384	C	T	T	Hoxd9.mouse_homeodomain_1	1	1	+	7.889898683853121	6.575096769520114	ACCATAAAA
chr10	86268240	86268241	chr10:86268241:G:A	rs541493724	G	A	G	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr10	86309658	86309659	chr10:86309659:G:A	rs2217224	G	A	G	Hoxd9.mouse_homeodomain_1	2	1	-	7.522691831404475	1.0352513737808375	CCCATAAAG
chr10	86390568	86390569	chr10:86390569:A:G	rs186585178	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.099252595576761	6.765173995714267	GCCATTAAA
chr10	86452226	86452227	chr10:86452227:A:G	rs78450388	A	G	A	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr10	86603285	86603286	chr10:86603286:G:A	rs2691055	G	A	A	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr10	86628525	86628526	chr10:86628526:T:C	rs4934234	T	C	C	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr10	86631963	86631964	chr10:86631964:C:T	rs73341965	C	T	C	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr10	86798887	86798888	chr10:86798888:A:G	rs189702869	A	G	A	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr10	86962900	86962901	chr10:86962901:C:A	rs71473291	C	A	C	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr10	87325068	87325069	chr10:87325069:C:G	rs184954980	C	G	c	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr10	87328014	87328015	chr10:87328015:T:C	rs12251946	T	C	t	Hoxd9.mouse_homeodomain_1	8	1	-	8.409487817756228	6.943160709270972	CCCATTAAA
chr10	87660700	87660701	chr10:87660701:G:A	rs7078594	G	A	G	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr10	87670309	87670310	chr10:87670310:G:A	rs7097212	G	A	G	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr10	88028130	88028131	chr10:88028131:T:A	rs116979738	T	A	T	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr10	88038374	88038375	chr10:88038375:G:A	rs546158411	G	A	G	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr10	88064705	88064706	chr10:88064706:T:C	chr10:88064706:T:C	T	C	T	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr10	88156384	88156385	chr10:88156385:G:A	rs77799402	G	A	G	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr10	88283148	88283149	chr10:88283149:G:A	rs1946391	G	A	G	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr10	88427354	88427355	chr10:88427355:A:G	rs10788598	A	G	A	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr10	88652766	88652767	chr10:88652767:T:C	rs17111075	T	C	T	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr10	88848831	88848832	chr10:88848832:A:G	rs41481645	A	G	a	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr10	88848833	88848834	chr10:88848834:C:G	rs76684520	C	G	c	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr10	88858710	88858711	chr10:88858711:G:A	rs35996190	G	A	G	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr10	88896098	88896099	chr10:88896099:G:A	rs56268252	G	A	G	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr10	88966972	88966973	chr10:88966973:G:A	rs143605050	G	A	G	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr10	88979189	88979190	chr10:88979190:A:T	rs17447140	A	T	A	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr10	88993486	88993487	chr10:88993487:T:C	rs7097467	T	C	T	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr10	89325849	89325850	chr10:89325850:C:A	rs7095398	C	A	A	Hoxd9.mouse_homeodomain_1	0	1	+	8.027213970992095	6.928093714955487	CACATAAAA
chr10	89471454	89471455	chr10:89471455:G:A	rs303204	G	A	G	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr10	89503787	89503788	chr10:89503788:C:T	rs77852940	C	T	C	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr10	90424813	90424814	chr10:90424814:C:T	rs2420000	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	+	8.287463081002919	6.392915775693977	CCAATAAAA
chr10	90424826	90424827	chr10:90424827:A:C	rs2153745	A	C	A	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr10	90424828	90424829	chr10:90424829:A:T	rs11186172	A	T	A	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr10	90453234	90453235	chr10:90453235:C:A	rs2487780	C	A	A	Hoxd9.mouse_homeodomain_1	2	1	+	7.716978748812629	7.0154228899258175	GACATAAAA
chr10	90596118	90596119	chr10:90596119:T:C	rs2490321	T	C	C	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr10	90912806	90912807	chr10:90912807:T:C	rs3939	T	C	T	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr10	91049236	91049237	chr10:91049237:T:C	rs61857898	T	C	T	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr10	91614484	91614485	chr10:91614485:G:C	rs12354606	G	C	G	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr10	91713869	91713870	chr10:91713870:T:C	rs12247755	T	C	T	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr10	91884794	91884795	chr10:91884795:C:A	rs7917710	C	A	C	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr10	91904886	91904887	chr10:91904887:T:C	rs7099658	T	C	t	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr10	92386876	92386877	chr10:92386877:T:G	rs913647	T	G	t	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr10	92690991	92690992	chr10:92690992:G:A	rs111896676	G	A	G	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr10	92938696	92938697	chr10:92938697:A:G	rs61862318	A	G	A	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr10	93063723	93063724	chr10:93063724:T:C	rs922955743	T	C	T	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr10	93141594	93141595	chr10:93141595:A:G	rs7915548	A	G	A	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr10	93193500	93193501	chr10:93193501:C:T	rs17382981	C	T	C	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr10	93255180	93255181	chr10:93255181:G:A	rs12765326	G	A	A	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr10	93435363	93435364	chr10:93435364:T:C	rs79746486	T	C	T	Hoxd9.mouse_homeodomain_1	5	1	-	8.98901893988973	2.6148292216431743	CCCATAAAA
chr10	93436204	93436205	chr10:93436205:A:G	rs527954272	A	G	A	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr10	93436454	93436455	chr10:93436455:A:T	rs76793587	A	T	A	Hoxd9.mouse_homeodomain_1	1	1	+	8.027213970992095	7.674217025556723	CACATAAAA
chr10	93626982	93626983	chr10:93626983:C:A	rs2785138	C	A	C	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr10	93807893	93807894	chr10:93807894:A:G	rs7098612	A	G	A	Hoxd9.mouse_homeodomain_1	8	1	+	7.091711387329735	5.6253842788444794	CCCATCAAA
chr10	94065572	94065573	chr10:94065573:T:C	rs946551315	T	C	T	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr10	94292989	94292990	chr10:94292990:A:G	rs3781266	A	G	A	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr10	94293481	94293482	chr10:94293482:T:A	rs3740365	T	A	T	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr10	94429591	94429592	chr10:94429592:C:T	chr10:94429592:C:T	C	T	C	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr10	94706320	94706321	chr10:94706321:G:T	rs1409655	G	T	g	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr10	94948468	94948469	chr10:94948469:G:A	rs10509679	G	A	g	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr10	95260919	95260920	chr10:95260920:C:T	rs7067693	C	T	C	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr10	95445052	95445053	chr10:95445053:A:G	chr10:95445053:A:G	A	G	A	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr10	95588102	95588103	chr10:95588103:T:C	rs17110999	T	C	T	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr10	95607076	95607077	chr10:95607077:A:G	rs496426	A	G	G	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr10	95651967	95651968	chr10:95651968:A:G	rs10882646	A	G	G	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr10	96280893	96280894	chr10:96280894:A:T	rs7919588	A	T	T	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr10	96310228	96310229	chr10:96310229:A:G	rs1048624263	A	G	A	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr10	96371015	96371016	chr10:96371016:C:A	rs17111753	C	A	C	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr10	96391836	96391837	chr10:96391837:T:C	rs11188743	T	C	T	Hoxd9.mouse_homeodomain_1	4	1	+	7.889898683853121	5.234852038990543	ACCATAAAA
chr10	96397527	96397528	chr10:96397528:A:G	rs7911604	A	G	A	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr10	96483164	96483165	chr10:96483165:T:A	rs57693102	T	A	T	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr10	96596162	96596163	chr10:96596163:G:A	rs1480105801	G	A	G	Hoxd9.mouse_homeodomain_1	0	1	-	7.522691831404475	5.628144526095533	CCCATAAAG
chr10	96621887	96621888	chr10:96621888:A:G	rs10882829	A	G	A	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr10	96885128	96885129	chr10:96885129:G:C	rs7080398	G	C	G	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr10	97177697	97177698	chr10:97177698:G:A	rs4919078	G	A	G	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr10	97203450	97203451	chr10:97203451:G:A	rs555608290	G	A	G	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr10	97314891	97314892	chr10:97314892:T:C	rs7067835	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.889898683853121	6.555820083990628	ACCATAAAA
chr10	97428494	97428495	chr10:97428495:C:T	rs28616696	C	T	C	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr10	98041741	98041742	chr10:98041742:G:C	rs11189473	G	C	G	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr10	98063063	98063064	chr10:98063064:T:C	rs958959589	T	C	T	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr10	98063108	98063109	chr10:98063109:C:T	rs554441974	C	T	C	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr10	98260179	98260180	chr10:98260180:G:A	rs147620868	G	A	G	Hoxd9.mouse_homeodomain_1	2	1	-	7.716978748812629	1.2295382911889927	GACATAAAA
chr10	98349834	98349835	chr10:98349835:T:C	rs74153602	T	C	T	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr10	98404813	98404814	chr10:98404814:C:T	rs4474372	C	T	C	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr10	98459616	98459617	chr10:98459617:T:A	rs10883100	T	A	T	Hoxd9.mouse_homeodomain_1	4	1	+	8.027213970992095	1.1853955236614904	CACATAAAA
chr10	98467534	98467535	chr10:98467535:T:G	rs117332320	T	G	A	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr10	98473855	98473856	chr10:98473856:C:T	rs72838931	C	T	C	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr10	98555060	98555061	chr10:98555061:G:A	rs666243	G	A	A	Hoxd9.mouse_homeodomain_1	0	1	+	8.099252595576761	7.3103675617196195	GCCATTAAA
chr10	98589563	98589564	chr10:98589564:C:T	rs151313084	C	T	C	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr10	98720787	98720788	chr10:98720788:A:G	rs7913534	A	G	A	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr10	98814786	98814787	chr10:98814787:A:C	rs1365959247	A	C	A	Hoxd9.mouse_homeodomain_1	8	1	+	8.287463081002919	6.75489545566052	CCAATAAAA
chr10	99084132	99084133	chr10:99084133:C:T	rs139943283	C	T	C	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr10	99232802	99232803	chr10:99232803:T:C	rs11816106	T	C	T	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr10	99626942	99626943	chr10:99626943:T:A	rs1477144	T	A	t	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr10	99694384	99694385	chr10:99694385:A:G	rs2300982	A	G	G	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr10	99787567	99787568	chr10:99787568:C:T	rs10748791	C	T	C	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr10	99787570	99787571	chr10:99787571:C:T	rs10748792	C	T	C	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr10	100433854	100433855	chr10:100433855:C:T	rs76835764	C	T	T	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr10	100433888	100433889	chr10:100433889:T:C	rs77769532	T	C	C	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr10	100555019	100555020	chr10:100555020:T:C	rs7099913	T	C	t	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr10	100829026	100829027	chr10:100829027:G:A	rs191543005	G	A	G	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr10	100866945	100866946	chr10:100866946:G:A	chr10:100866946:G:A	G	A	G	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr10	100881954	100881955	chr10:100881955:A:G	rs72846660	A	G	A	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr10	100895555	100895556	chr10:100895556:T:C	rs11190741	T	C	T	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr10	100914084	100914085	chr10:100914085:C:T	rs73336283	C	T	C	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr10	101010756	101010757	chr10:101010757:T:C	rs34616847	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.522691831404475	6.188613231541982	CCCATAAAG
chr10	101154334	101154335	chr10:101154335:G:A	rs80305735	G	A	G	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr10	101182563	101182564	chr10:101182564:T:G	rs1015274	T	G	t	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr10	101304549	101304550	chr10:101304550:C:T	rs900796258	C	T	C	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr10	101583775	101583776	chr10:101583776:A:G	rs3730465	A	G	G	Hoxd9.mouse_homeodomain_1	1	1	+	7.716978748812629	2.2692504889278973	GACATAAAA
chr10	101625091	101625092	chr10:101625092:A:T	rs10883667	A	T	A	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr10	101663000	101663001	chr10:101663001:A:G	rs11191079	A	G	A	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr10	101831385	101831386	chr10:101831386:C:T	rs72552060	C	T	C	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr10	102226129	102226130	chr10:102226130:G:T	rs61874851	G	T	G	Hoxd9.mouse_homeodomain_1	2	1	-	7.654940340027237	6.953384481140425	CCCGTAAAA
chr10	102245310	102245311	chr10:102245311:T:C	rs182820028	T	C	T	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr10	102342360	102342361	chr10:102342361:G:A	rs11191265	G	A	g	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr10	102743749	102743750	chr10:102743750:C:T	rs1192941124	C	T	C	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr10	102743776	102743777	chr10:102743777:C:G	chr10:102743777:C:G	C	G	C	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr10	102934159	102934160	chr10:102934160:G:A	rs10748836	G	A	A	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr10	103351621	103351622	chr10:103351622:C:T	rs559121606	C	T	C	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr10	103469962	103469963	chr10:103469963:T:C	rs3014195	T	C	C	Hoxd9.mouse_homeodomain_1	8	1	-	7.091711387329735	5.6253842788444794	CCCATCAAA
chr10	103547966	103547967	chr10:103547967:G:A	rs74154533	G	A	A	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr10	103681440	103681441	chr10:103681441:A:G	rs10883901	A	G	G	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr10	103832020	103832021	chr10:103832021:T:G	rs11191818	T	G	T	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr10	103848248	103848249	chr10:103848249:C:T	rs7910755	C	T	C	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr10	103966633	103966634	chr10:103966634:A:G	rs779337817	A	G	A	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr10	103969834	103969835	chr10:103969835:T:G	rs139754588	T	G	T	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr10	103976544	103976545	chr10:103976545:G:T	rs61863698	G	T	G	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr10	104127875	104127876	chr10:104127876:T:A	rs10883971	T	A	A	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr10	104199931	104199932	chr10:104199932:T:C	rs7086515	T	C	T	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr10	104418068	104418069	chr10:104418069:T:C	rs11594462	T	C	T	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr10	104511076	104511077	chr10:104511077:T:C	rs67815736	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.889898683853121	6.555820083990628	ACCATAAAA
chr10	104542347	104542348	chr10:104542348:A:G	rs74157130	A	G	A	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr10	104642624	104642625	chr10:104642625:G:A	rs61732122	G	A	G	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr10	104734702	104734703	chr10:104734703:G:T	rs10884039	G	T	G	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr10	104735012	104735013	chr10:104735013:A:C	rs1472050	A	C	A	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr10	105121710	105121711	chr10:105121711:A:G	rs10884095	A	G	A	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr10	105132693	105132694	chr10:105132694:G:C	rs1377005	G	C	G	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr10	105567280	105567281	chr10:105567281:C:T	rs10786872	C	T	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.34470511784777	8.678783717710262	GCCGTAAAA
chr10	105857800	105857801	chr10:105857801:T:C	rs548199667	T	C	T	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr10	105975007	105975008	chr10:105975008:C:T	rs72815079	C	T	C	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr10	105975028	105975029	chr10:105975029:T:C	rs17119914	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.099252595576761	6.765173995714267	GCCATTAAA
chr10	105982906	105982907	chr10:105982907:T:C	rs1361961831	T	C	T	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr10	105987135	105987136	chr10:105987136:A:C	rs1027391412	A	C	A	Hoxd9.mouse_homeodomain_1	3	1	+	7.716978748812629	1.1414706446091483	GACATAAAA
chr10	106159249	106159250	chr10:106159250:C:T	rs11192740	C	T	T	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr10	106168070	106168071	chr10:106168071:C:T	rs4304692	C	T	C	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr10	106297629	106297630	chr10:106297630:A:G	rs79128240	A	G	A	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr10	106297733	106297734	chr10:106297734:T:C	rs10884294	T	C	T	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr10	106399801	106399802	chr10:106399802:C:T	rs1568919	C	T	T	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr10	106570700	106570701	chr10:106570701:T:C	rs184634085	T	C	T	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr10	106592426	106592427	chr10:106592427:C:T	rs17121023	C	T	T	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr10	107025792	107025793	chr10:107025793:T:C	rs4918279	T	C	T	Hoxd9.mouse_homeodomain_1	5	1	-	8.98901893988973	2.6148292216431743	CCCATAAAA
chr10	107159939	107159940	chr10:107159940:C:A	rs1337431	C	A	C	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr10	108005287	108005288	chr10:108005288:G:C	rs2184348	G	C	C	Hoxd9.mouse_homeodomain_1	2	1	-	7.716978748812629	4.248987091360299	GACATAAAA
chr10	108089313	108089314	chr10:108089314:A:C	rs12774432	A	C	A	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr10	108204661	108204662	chr10:108204662:T:A	rs116346253	T	A	T	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr10	108243961	108243962	chr10:108243962:C:G	rs7920134	C	G	C	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr10	108244715	108244716	chr10:108244716:C:T	rs317509	C	T	T	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr10	108392525	108392526	chr10:108392526:G:C	rs1329487	G	C	G	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr10	108454530	108454531	chr10:108454531:G:A	rs7083687	G	A	g	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr10	108766232	108766233	chr10:108766233:T:C	rs1856168	T	C	C	Hoxd9.mouse_homeodomain_1	3	1	-	8.678783717710262	7.34470511784777	GCCATAAAA
chr10	108788044	108788045	chr10:108788045:A:G	rs7920198	A	G	G	Hoxd9.mouse_homeodomain_1	4	1	-	7.091711387329735	4.436664742467157	CCCATCAAA
chr10	108903343	108903344	chr10:108903344:G:A	rs117980948	G	A	G	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr10	108904381	108904382	chr10:108904382:A:C	chr10:108904382:A:C	A	C	A	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr10	109114852	109114853	chr10:109114853:T:C	rs943268	T	C	T	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr10	109743183	109743184	chr10:109743184:A:G	rs4918457	A	G	G	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr10	109823363	109823364	chr10:109823364:G:A	rs11194880	G	A	G	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr10	109999401	109999402	chr10:109999402:G:C	rs6584964	G	C	C	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr10	110176496	110176497	chr10:110176497:G:A	rs118041319	G	A	G	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr10	110187114	110187115	chr10:110187115:A:G	rs79404554	A	G	A	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr10	110323542	110323543	chr10:110323543:G:A	rs79596222	G	A	G	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr10	110497862	110497863	chr10:110497863:C:T	rs1414762481	C	T	C	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr10	110610711	110610712	chr10:110610712:T:C	rs57531779	T	C	T	Hoxd9.mouse_homeodomain_1	8	1	-	8.409487817756228	6.943160709270972	CCCATTAAA
chr10	110672277	110672278	chr10:110672278:T:C	rs2000083	T	C	T	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr10	110672278	110672279	chr10:110672279:T:C	rs17127727	T	C	T	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr10	110672307	110672308	chr10:110672308:C:T	rs184835363	C	T	C	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr10	110676376	110676377	chr10:110676377:A:T	rs55876748	A	T	A	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr10	110746316	110746317	chr10:110746317:T:C	rs150934311	T	C	T	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr10	110794883	110794884	chr10:110794884:A:C	rs145858063	A	C	A	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr10	110865918	110865919	chr10:110865919:G:C	rs35394459	G	C	G	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr10	110933043	110933044	chr10:110933044:G:A	rs9804245	G	A	G	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr10	111096666	111096667	chr10:111096667:T:G	rs7908645	T	G	G	Hoxd9.mouse_homeodomain_1	5	1	-	7.241935125048919	5.344627572488923	CCCATACAA
chr10	111098816	111098817	chr10:111098817:C:T	rs11593780	C	T	C	Hoxd9.mouse_homeodomain_1	1	1	+	7.091711387329735	5.776909472996728	CCCATCAAA
chr10	111138406	111138407	chr10:111138407:C:G	rs10466194	C	G	C	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr10	111159906	111159907	chr10:111159907:A:G	rs12220858	A	G	A	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr10	111630761	111630762	chr10:111630762:G:A	rs75404805	G	A	G	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr10	111827630	111827631	chr10:111827631:A:C	rs10787414	A	C	C	Hoxd9.mouse_homeodomain_1	7	1	+	8.099252595576761	5.209836825546175	GCCATTAAA
chr10	111875521	111875522	chr10:111875522:G:A	rs670625	G	A	G	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr10	112249253	112249254	chr10:112249254:T:C	rs10787433	T	C	T	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr10	112333592	112333593	chr10:112333593:G:C	rs2419625	G	C	C	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr10	112350218	112350219	chr10:112350219:A:G	rs10749116	A	G	G	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr10	112426465	112426466	chr10:112426466:A:G	rs11598016	A	G	A	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr10	112588706	112588707	chr10:112588707:C:T	rs11818906	C	T	T	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr10	112631628	112631629	chr10:112631629:A:C	rs4918761	A	C	A	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr10	112679324	112679325	chr10:112679325:G:A	rs6585169	G	A	A	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr10	112741925	112741926	chr10:112741926:A:G	rs7075671	A	G	A	Hoxd9.mouse_homeodomain_1	6	1	+	7.9772278588234515	1.2734019122317202	GCAATAAAA
chr10	112755570	112755571	chr10:112755571:C:T	rs17130045	C	T	C	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr10	112759702	112759703	chr10:112759703:T:G	rs17130052	T	G	T	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr10	112959734	112959735	chr10:112959735:C:T	rs79056017	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	+	8.409487817756228	6.514940512447287	CCCATTAAA
chr10	112986914	112986915	chr10:112986915:T:C	rs10885401	T	C	T	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr10	113079956	113079957	chr10:113079957:G:A	rs12768310	G	A	a	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr10	113340310	113340311	chr10:113340311:T:G	rs899563	T	G	T	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr10	113381820	113381821	chr10:113381821:T:C	rs57105533	T	C	T	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr10	113424260	113424261	chr10:113424261:A:C	chr10:113424261:A:C	A	C	A	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr10	113646564	113646565	chr10:113646565:C:T	rs4578316	C	T	C	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr10	113663987	113663988	chr10:113663988:G:A	rs1109927	G	A	G	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr10	113731470	113731471	chr10:113731471:G:A	rs17090919	G	A	G	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr10	113824849	113824850	chr10:113824850:T:G	rs4918876	T	G	T	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr10	113830652	113830653	chr10:113830653:C:T	rs7084835	C	T	T	Hoxd9.mouse_homeodomain_1	2	1	+	8.027213970992095	1.5397735133684596	CACATAAAA
chr10	114019557	114019558	chr10:114019558:A:G	rs10749156	A	G	A	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr10	114019567	114019568	chr10:114019568:C:T	rs10787512	C	T	C	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr10	114026851	114026852	chr10:114026852:G:T	rs72823015	G	T	G	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr10	114379922	114379923	chr10:114379923:C:G	rs7911173	C	G	G	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr10	114594436	114594437	chr10:114594437:T:G	rs2483583	T	G	T	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr10	114652929	114652930	chr10:114652930:A:T	rs11196839	A	T	T	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr10	114683860	114683861	chr10:114683861:A:G	rs763000182	A	G	A	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr10	115657645	115657646	chr10:115657646:C:A	rs57581235	C	A	C	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr10	115930366	115930367	chr10:115930367:A:G	rs10490987	A	G	g	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr10	115977216	115977217	chr10:115977217:A:G	rs180701	A	G	G	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr10	116116896	116116897	chr10:116116897:G:A	rs2694814	G	A	G	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr10	116206125	116206126	chr10:116206126:T:C	rs79564287	T	C	t	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr10	116232905	116232906	chr10:116232906:G:A	rs7097998	G	A	G	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr10	116237289	116237290	chr10:116237290:C:G	rs2420252	C	G	G	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr10	116241432	116241433	chr10:116241433:C:T	rs2420255	C	T	C	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr10	116241435	116241436	chr10:116241436:G:T	rs145541812	G	T	G	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr10	116503244	116503245	chr10:116503245:C:T	rs4751605	C	T	c	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr10	116612060	116612061	chr10:116612061:C:A	rs7903894	C	A	T	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr10	116620832	116620833	chr10:116620833:C:T	rs12415178	C	T	T	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr10	116620833	116620834	chr10:116620834:G:C	rs11197761	G	C	G	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr10	116658041	116658042	chr10:116658042:A:G	rs114490169	A	G	A	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr10	116658044	116658045	chr10:116658045:A:G	rs116506570	A	G	A	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr10	116695407	116695408	chr10:116695408:G:C	rs3010469	G	C	G	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr10	116695408	116695409	chr10:116695409:T:C	rs3010470	T	C	T	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr10	116733881	116733882	chr10:116733882:G:A	rs66688522	G	A	G	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr10	116735425	116735426	chr10:116735426:C:G	rs1665641	C	G	G	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr10	116802183	116802184	chr10:116802184:T:C	rs10732812	T	C	C	Hoxd9.mouse_homeodomain_1	3	1	-	7.212456609225008	5.878378009362515	GCCATAAAG
chr10	116849422	116849423	chr10:116849423:G:A	rs17095337	G	A	G	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr10	117265778	117265779	chr10:117265779:A:G	rs7095278	A	G	A	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr10	118017600	118017601	chr10:118017601:A:T	rs12570100	A	T	A	Hoxd9.mouse_homeodomain_1	3	1	+	7.522691831404475	5.51921069459583	CCCATAAAG
chr10	118304679	118304680	chr10:118304680:T:C	rs4752150	T	C	C	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr10	118447356	118447357	chr10:118447357:T:C	rs7091683	T	C	C	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr10	118473087	118473088	chr10:118473088:C:G	rs67737129	C	G	C	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr10	118721170	118721171	chr10:118721171:T:A	rs34909357	T	A	T	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr10	118721175	118721176	chr10:118721176:G:A	rs1925943	G	A	A	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr10	118730032	118730033	chr10:118730033:T:C	rs7089920	T	C	T	Hoxd9.mouse_homeodomain_1	6	1	-	7.9772278588234515	1.2734019122317202	GCAATAAAA
chr10	118792776	118792777	chr10:118792777:T:A	rs79515529	T	A	T	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr10	118842935	118842936	chr10:118842936:A:G	rs59354403	A	G	G	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr10	118842966	118842967	chr10:118842967:C:G	rs117565161	C	G	C	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr10	118842978	118842979	chr10:118842979:C:T	rs59589146	C	T	C	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr10	118856096	118856097	chr10:118856097:A:G	rs4752220	A	G	A	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr10	118966329	118966330	chr10:118966330:A:C	rs145715826	A	C	A	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr10	119162110	119162111	chr10:119162111:G:T	rs2282254	G	T	G	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr10	119209138	119209139	chr10:119209139:C:T	rs117454191	C	T	C	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr10	119251386	119251387	chr10:119251387:A:G	rs60557758	A	G	A	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr10	119402582	119402583	chr10:119402583:T:C	rs1110296	T	C	T	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr10	119539333	119539334	chr10:119539334:G:C	rs6585552	G	C	G	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr10	119556377	119556378	chr10:119556378:A:G	rs2917928	A	G	G	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr10	119650774	119650775	chr10:119650775:A:G	rs7894419	A	G	A	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr10	119999037	119999038	chr10:119999038:A:G	rs6585570	A	G	G	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr10	120036170	120036171	chr10:120036171:T:C	rs10886577	T	C	T	Hoxd9.mouse_homeodomain_1	7	1	-	7.091711387329735	0.38788544073800313	CCCATCAAA
chr10	120105834	120105835	chr10:120105835:G:A	rs10886596	G	A	G	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr10	120177634	120177635	chr10:120177635:G:A	rs1929700	G	A	A	Hoxd9.mouse_homeodomain_1	0	1	+	7.9772278588234515	7.188342824966311	GCAATAAAA
chr10	120177662	120177663	chr10:120177663:A:G	rs12766993	A	G	A	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr10	120266230	120266231	chr10:120266231:G:A	rs79097168	G	A	G	Hoxd9.mouse_homeodomain_1	3	1	+	7.34470511784777	8.678783717710262	GCCGTAAAA
chr10	120420662	120420663	chr10:120420663:C:T	rs7083856	C	T	C	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr10	120420707	120420708	chr10:120420708:G:A	rs7084098	G	A	G	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr10	120433414	120433415	chr10:120433415:G:A	rs36108282	G	A	G	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr10	120504042	120504043	chr10:120504043:A:T	rs2478418	A	T	T	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr10	120524682	120524683	chr10:120524683:G:T	rs117407786	G	T	G	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr10	120841757	120841758	chr10:120841758:A:G	rs1254166	A	G	A	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr10	120852259	120852260	chr10:120852260:A:T	rs7917351	A	T	A	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr10	120927239	120927240	chr10:120927240:C:G	rs7906915	C	G	C	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr10	121033485	121033486	chr10:121033486:T:G	chr10:121033486:T:G	T	G	T	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr10	121033494	121033495	chr10:121033495:T:G	rs74158281	T	G	T	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr10	121188235	121188236	chr10:121188236:C:T	rs145743977	C	T	C	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr10	121217581	121217582	chr10:121217582:T:G	rs1907227	T	G	T	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr10	121232927	121232928	chr10:121232928:C:T	rs11199844	C	T	C	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr10	121244013	121244014	chr10:121244014:A:G	rs11199852	A	G	a	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr10	121244053	121244054	chr10:121244054:G:A	rs7899705	G	A	a	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr10	121267718	121267719	chr10:121267719:T:C	rs72830643	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.889898683853121	6.555820083990628	ACCATAAAA
chr10	121280287	121280288	chr10:121280288:T:G	rs10788163	T	G	G	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr10	121292895	121292896	chr10:121292896:A:C	rs12220387	A	C	A	Hoxd9.mouse_homeodomain_1	7	1	+	7.522691831404475	4.633276061373889	CCCATAAAG
chr10	121312572	121312573	chr10:121312573:G:T	rs11199886	G	T	G	Hoxd9.mouse_homeodomain_1	2	1	-	7.091711387329735	6.390155528442924	CCCATCAAA
chr10	121350975	121350976	chr10:121350976:C:T	rs12357792	C	T	C	Hoxd9.mouse_homeodomain_1	1	1	+	7.091711387329735	5.776909472996728	CCCATCAAA
chr10	121381146	121381147	chr10:121381147:A:C	rs9420328	A	C	A	Hoxd9.mouse_homeodomain_1	2	1	+	7.9772278588234515	8.678783717710262	GCAATAAAA
chr10	121455574	121455575	chr10:121455575:C:A	rs10788184	C	A	C	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr10	121525808	121525809	chr10:121525809:G:A	rs41295529	G	A	G	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr10	121598758	121598759	chr10:121598759:C:T	rs1863744	C	T	C	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr10	121598778	121598779	chr10:121598779:A:C	chr10:121598779:A:C	A	C	A	Hoxd9.mouse_homeodomain_1	4	1	-	7.716978748812629	0.875160301482023	GACATAAAA
chr10	121598797	121598798	chr10:121598798:A:G	rs1219639	A	G	G	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr10	121660790	121660791	chr10:121660791:C:A	rs11200062	C	A	C	Hoxd9.mouse_homeodomain_1	0	1	+	8.027213970992095	6.928093714955487	CACATAAAA
chr10	122007570	122007571	chr10:122007571:T:C	rs117910143	T	C	T	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr10	122060399	122060400	chr10:122060400:T:G	rs150991450	T	G	T	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr10	122102131	122102132	chr10:122102132:A:G	rs145615770	A	G	a	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr10	122120019	122120020	chr10:122120020:G:A	rs78080037	G	A	G	Hoxd9.mouse_homeodomain_1	3	1	+	7.34470511784777	8.678783717710262	GCCGTAAAA
chr10	122120028	122120029	chr10:122120029:G:A	rs10887078	G	A	A	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr10	122368473	122368474	chr10:122368474:T:C	rs56029211	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.027213970992095	6.693135371129603	CACATAAAA
chr10	122390794	122390795	chr10:122390795:C:T	rs12242543	C	T	C	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr10	123134652	123134653	chr10:123134653:C:A	rs11248409	C	A	C	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr10	123455314	123455315	chr10:123455315:A:C	rs114941166	A	C	C	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr10	123520146	123520147	chr10:123520147:A:C	rs78130050	A	C	A	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr10	123521674	123521675	chr10:123521675:G:T	rs11248567	G	T	G	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr10	123774402	123774403	chr10:123774403:A:C	rs17616507	A	C	A	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr10	123796453	123796454	chr10:123796454:T:C	rs55674223	T	C	T	Hoxd9.mouse_homeodomain_1	4	1	+	7.716978748812629	5.061932103950051	GACATAAAA
chr10	123848280	123848281	chr10:123848281:A:G	rs138576474	A	G	A	Hoxd9.mouse_homeodomain_1	8	1	+	8.98901893988973	7.522691831404475	CCCATAAAA
chr10	123858516	123858517	chr10:123858517:G:A	rs77287275	G	A	G	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr10	124000996	124000997	chr10:124000997:A:G	rs147262821	A	G	A	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr10	124146849	124146850	chr10:124146850:T:G	rs927531152	T	G	G	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr10	124172257	124172258	chr10:124172258:C:G	rs36144827	C	G	C	Hoxd9.mouse_homeodomain_1	0	1	-	7.716978748812629	8.027213970992095	GACATAAAA
chr10	124258132	124258133	chr10:124258133:T:C	rs10794143	T	C	C	Hoxd9.mouse_homeodomain_1	3	1	-	7.091711387329735	5.757632787467242	CCCATCAAA
chr10	124258133	124258134	chr10:124258134:G:C	rs10901742	G	C	G	Hoxd9.mouse_homeodomain_1	2	1	-	7.091711387329735	3.623719729877405	CCCATCAAA
chr10	124556358	124556359	chr10:124556359:G:T	rs7897047	G	T	G	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr10	124562560	124562561	chr10:124562561:C:T	rs61870230	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	+	8.027213970992095	6.132666665683155	CACATAAAA
chr10	124861199	124861200	chr10:124861200:G:A	rs144492661	G	A	g	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr10	124864996	124864997	chr10:124864997:C:T	rs76995699	C	T	C	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr10	124865001	124865002	chr10:124865002:G:A	rs2015178	G	A	G	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr10	125009235	125009236	chr10:125009236:C:T	rs373301616	C	T	C	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr10	125009250	125009251	chr10:125009251:C:T	rs10732902	C	T	T	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr10	125037510	125037511	chr10:125037511:T:C	rs2949368	T	C	C	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr10	125052227	125052228	chr10:125052228:T:G	rs2938010	T	G	G	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr10	125063600	125063601	chr10:125063601:C:T	rs117657338	C	T	C	Hoxd9.mouse_homeodomain_1	2	1	+	8.027213970992095	1.5397735133684596	CACATAAAA
chr10	125073794	125073795	chr10:125073795:G:A	rs75804465	G	A	G	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr10	125246519	125246520	chr10:125246520:C:T	rs4962434	C	T	T	Hoxd9.mouse_homeodomain_1	0	1	+	7.45645131454733	5.561904009238388	CCCATAAAC
chr10	125441477	125441478	chr10:125441478:A:G	rs6597705	A	G	G	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr10	125709852	125709853	chr10:125709853:G:A	rs60419287	G	A	G	Hoxd9.mouse_homeodomain_1	2	1	-	8.099252595576761	1.6118121379531245	GCCATTAAA
chr10	125812571	125812572	chr10:125812572:A:T	rs41314430	A	T	A	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr10	126191286	126191287	chr10:126191287:C:T	rs6597743	C	T	C	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr10	126216343	126216344	chr10:126216344:C:T	rs1004861656	C	T	C	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr10	126380107	126380108	chr10:126380108:A:G	rs11244970	A	G	A	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr10	126428869	126428870	chr10:126428870:G:T	rs12146325	G	T	G	Hoxd9.mouse_homeodomain_1	0	1	-	8.409487817756228	7.3103675617196195	CCCATTAAA
chr10	126456348	126456349	chr10:126456349:G:A	rs12246117	G	A	G	Hoxd9.mouse_homeodomain_1	0	1	+	8.678783717710262	7.889898683853121	GCCATAAAA
chr10	126476762	126476763	chr10:126476763:T:G	rs7919269	T	G	G	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr10	126638994	126638995	chr10:126638995:C:G	rs11592979	C	G	C	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr10	126853536	126853537	chr10:126853537:T:C	rs7920965	T	C	C	Hoxd9.mouse_homeodomain_1	2	1	-	8.287463081002919	5.5210272824374	CCAATAAAA
chr10	126861949	126861950	chr10:126861950:A:T	rs11245198	A	T	T	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr10	126878394	126878395	chr10:126878395:G:T	rs11599217	G	T	G	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr10	127025070	127025071	chr10:127025071:C:T	rs3818881	C	T	C	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr10	127041859	127041860	chr10:127041860:C:T	rs115252718	C	T	C	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr10	127207102	127207103	chr10:127207103:A:G	rs2483865	A	G	G	Hoxd9.mouse_homeodomain_1	4	1	-	7.522691831404475	4.867645186541897	CCCATAAAG
chr10	127298691	127298692	chr10:127298692:A:G	rs2766032	A	G	G	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr10	127310647	127310648	chr10:127310648:A:G	rs11017228	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	7.212456609225008	5.878378009362515	GCCATAAAG
chr10	127319456	127319457	chr10:127319457:C:T	rs10829749	C	T	C	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr10	127507654	127507655	chr10:127507655:C:T	rs7097718	C	T	c	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr10	127507661	127507662	chr10:127507662:T:C	rs140633824	T	C	t	Hoxd9.mouse_homeodomain_1	3	1	-	8.027213970992095	6.693135371129603	CACATAAAA
chr10	127523779	127523780	chr10:127523780:G:A	rs114792257	G	A	G	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr10	127523800	127523801	chr10:127523801:T:C	rs1999637	T	C	T	Hoxd9.mouse_homeodomain_1	1	1	-	8.027213970992095	2.5794857111073646	CACATAAAA
chr10	127590381	127590382	chr10:127590382:T:C	rs10765137	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.212456609225008	5.878378009362515	GCCATAAAG
chr10	127687810	127687811	chr10:127687811:G:A	rs60812718	G	A	G	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr10	127833804	127833805	chr10:127833805:G:A	rs10437447	G	A	G	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr10	127833811	127833812	chr10:127833812:A:G	rs7905198	A	G	A	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr10	128207504	128207505	chr10:128207505:G:T	rs72851178	G	T	G	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr10	128389028	128389029	chr10:128389029:T:G	rs1857383	T	G	T	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr10	128451145	128451146	chr10:128451146:C:T	rs877141	C	T	c	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr10	128481642	128481643	chr10:128481643:T:C	chr10:128481643:T:C	T	C	T	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr10	128481647	128481648	chr10:128481648:C:T	rs4750963	C	T	C	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr10	128505650	128505651	chr10:128505651:C:T	rs11016284	C	T	c	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr10	128678423	128678424	chr10:128678424:T:C	rs4750987	T	C	C	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr10	128722098	128722099	chr10:128722099:T:C	rs73379473	T	C	C	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr10	128780617	128780618	chr10:128780618:G:C	rs517409	G	C	G	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr10	128809096	128809097	chr10:128809097:G:A	rs4751007	G	A	G	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr10	128882407	128882408	chr10:128882408:G:A	rs7908140	G	A	A	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr10	128882597	128882598	chr10:128882598:C:T	rs79348487	C	T	C	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr10	128900072	128900073	chr10:128900073:T:G	rs1535972	T	G	G	Hoxd9.mouse_homeodomain_1	7	1	-	8.98901893988973	6.099603169859144	CCCATAAAA
chr10	128951085	128951086	chr10:128951086:T:C	rs16908774	T	C	T	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr10	128959239	128959240	chr10:128959240:A:G	rs2060893	A	G	A	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr10	129184630	129184631	chr10:129184631:C:T	rs896703	C	T	C	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr10	129272080	129272081	chr10:129272081:G:T	rs1019377	G	T	G	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr10	129660964	129660965	chr10:129660965:G:A	rs9299872	G	A	A	Hoxd9.mouse_homeodomain_1	3	1	+	7.34470511784777	8.678783717710262	GCCGTAAAA
chr10	129708244	129708245	chr10:129708245:T:C	rs11593531	T	C	C	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr10	129708281	129708282	chr10:129708282:G:A	rs2282163	G	A	G	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr10	129759668	129759669	chr10:129759669:G:A	rs3793905	G	A	G	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr10	129760948	129760949	chr10:129760949:G:T	rs3793906	G	T	G	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr10	129760970	129760971	chr10:129760971:G:A	rs3793907	G	A	G	Hoxd9.mouse_homeodomain_1	2	1	-	7.34470511784777	0.8572646602241328	GCCGTAAAA
chr10	129790498	129790499	chr10:129790499:A:C	rs11016933	A	C	A	Hoxd9.mouse_homeodomain_1	5	1	+	7.9772278588234515	6.079920306263457	GCAATAAAA
chr10	129790501	129790502	chr10:129790502:A:C	rs11016934	A	C	A	Hoxd9.mouse_homeodomain_1	8	1	+	7.9772278588234515	6.444660233481052	GCAATAAAA
chr10	130276670	130276671	chr10:130276671:C:A	rs2480270	C	A	C	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr10	130356487	130356488	chr10:130356488:G:A	rs11017215	G	A	G	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr10	130452401	130452402	chr10:130452402:T:G	rs307385	T	G	G	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr10	130658778	130658779	chr10:130658779:A:T	rs2397320	A	T	A	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr10	130772568	130772569	chr10:130772569:G:C	rs117790287	G	C	G	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr10	130804761	130804762	chr10:130804762:T:C	rs1703650	T	C	C	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr10	130804795	130804796	chr10:130804796:G:A	rs1655164	G	A	A	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr10	130819127	130819128	chr10:130819128:T:C	rs11599147	T	C	T	Hoxd9.mouse_homeodomain_1	8	1	-	7.889898683853121	6.423571575367866	ACCATAAAA
chr10	130876680	130876681	chr10:130876681:T:C	rs1655155	T	C	C	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr10	130884465	130884466	chr10:130884466:T:C	rs4751295	T	C	C	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr10	131007594	131007595	chr10:131007595:G:T	rs10829873	G	T	G	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr10	131016589	131016590	chr10:131016590:G:A	rs7924276	G	A	A	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr10	131072151	131072152	chr10:131072152:C:T	rs10765034	C	T	C	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr10	131140995	131140996	chr10:131140996:T:G	rs11017743	T	G	G	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr10	131343193	131343194	chr10:131343194:G:A	rs11594613	G	A	G	Hoxd9.mouse_homeodomain_1	2	1	-	8.409487817756228	1.922047360132591	CCCATTAAA
chr10	131394059	131394060	chr10:131394060:G:T	rs11017939	G	T	G	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr10	131587332	131587333	chr10:131587333:C:T	rs923355610	C	T	C	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr10	131655165	131655166	chr10:131655166:T:G	rs55922632	T	G	G	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr10	131682933	131682934	chr10:131682934:C:T	rs61861812	C	T	C	Hoxd9.mouse_homeodomain_1	8	1	+	7.1462160923678635	5.746270592944195	GCCATAAAC
chr10	131739195	131739196	chr10:131739196:A:T	rs58951707	A	T	-	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr10	131820816	131820817	chr10:131820817:G:C	rs4897800	G	C	G	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr10	131860232	131860233	chr10:131860233:G:A	rs954817765	G	A	G	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr10	131885807	131885808	chr10:131885808:T:C	rs931097160	T	C	T	Hoxd9.mouse_homeodomain_1	5	1	-	7.212456609225008	0.8382668909784519	GCCATAAAG
chr10	131980309	131980310	chr10:131980310:G:C	rs553809400	G	C	G	Hoxd9.mouse_homeodomain_1	2	1	-	8.678783717710262	5.2107920602579325	GCCATAAAA
chr10	131993224	131993225	chr10:131993225:G:A	rs11146472	G	A	G	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr10	131993230	131993231	chr10:131993231:G:A	rs9419402	G	A	A	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr10	132066589	132066590	chr10:132066590:C:A	rs9419176	C	A	C	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr10	132099333	132099334	chr10:132099334:G:A	rs2172129	G	A	g	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr10	132105851	132105852	chr10:132105852:T:C	rs75392617	T	C	C	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr10	132205726	132205727	chr10:132205727:G:C	rs140219299	G	C	G	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr10	132443710	132443711	chr10:132443711:T:A	rs190397408	T	A	T	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr10	132765521	132765522	chr10:132765522:A:C	rs12769959	A	C	C	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr10	132765539	132765540	chr10:132765540:A:C	rs3829132	A	C	C	Hoxd9.mouse_homeodomain_1	4	1	-	7.522691831404475	0.6808733840738688	CCCATAAAG
chr10	132787981	132787982	chr10:132787982:G:A	rs545697909	G	A	g	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr10	132814658	132814659	chr10:132814659:G:C	rs57517709	G	C	G	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr10	132870735	132870736	chr10:132870736:T:C	rs7100926	T	C	N	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr10	132967478	132967479	chr10:132967479:C:T	rs12776902	C	T	T	Hoxd9.mouse_homeodomain_1	0	1	-	7.9772278588234515	7.188342824966311	GCAATAAAA
chr10	133007339	133007340	chr10:133007340:C:T	rs77826792	C	T	C	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr10	133022001	133022002	chr10:133022002:C:T	rs35754644	C	T	c	Hoxd9.mouse_homeodomain_1	1	1	+	7.45645131454733	6.141649400214323	CCCATAAAC
chr10	133567060	133567061	chr10:133567061:T:C	rs34890953	T	C	-	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr11	245522	245523	chr11:245523:C:T	rs10902113	C	T	C	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr11	313914	313915	chr11:313915:A:C	rs375458477	A	C	A	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr11	367776	367777	chr11:367777:A:G	rs182609160	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.027213970992095	6.693135371129603	CACATAAAA
chr11	433134	433135	chr11:433135:T:C	rs6598022	T	C	C	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr11	572059	572060	chr11:572060:G:A	rs147254185	G	A	G	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr11	795979	795980	chr11:795980:A:C	rs116297624	A	C	A	Hoxd9.mouse_homeodomain_1	8	1	+	8.678783717710262	7.1462160923678635	GCCATAAAA
chr11	1019193	1019194	chr11:1019194:A:G	rs11246381	A	G	A	Hoxd9.mouse_homeodomain_1	4	1	-	7.212456609225008	4.557409964362429	GCCATAAAG
chr11	1084010	1084011	chr11:1084011:T:C	rs113808517	T	C	t	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr11	1163417	1163418	chr11:1163418:C:T	rs28373192	C	T	C	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr11	1174111	1174112	chr11:1174112:T:C	rs878987154	T	C	c	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr11	1180831	1180832	chr11:1180832:C:A	rs906649196	C	A	c	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr11	1376788	1376789	chr11:1376789:G:A	rs10832843	G	A	g	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr11	1398180	1398181	chr11:1398181:A:G	rs10766599	A	G	A	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr11	1409559	1409560	chr11:1409560:T:C	rs7115782	T	C	C	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr11	1409568	1409569	chr11:1409569:G:C	rs61867656	G	C	c	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr11	1652791	1652792	chr11:1652792:T:A	rs28757568	T	A	t	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr11	1652792	1652793	chr11:1652793:A:T	rs1565370	A	T	a	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr11	2213459	2213460	chr11:2213460:A:G	rs10840606	A	G	A	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr11	2247990	2247991	chr11:2247991:A:G	rs10741553	A	G	G	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr11	2263778	2263779	chr11:2263779:G:C	rs7396048	G	C	C	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr11	2328858	2328859	chr11:2328859:C:T	rs116058145	C	T	C	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr11	2385747	2385748	chr11:2385748:G:A	rs74048500	G	A	G	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr11	2529499	2529500	chr11:2529500:A:G	rs179429	A	G	G	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr11	2564748	2564749	chr11:2564749:C:G	rs7942492	C	G	C	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr11	2586374	2586375	chr11:2586375:C:T	chr11:2586375:C:T	C	T	C	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr11	2700888	2700889	chr11:2700889:C:T	rs56134303	C	T	T	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr11	2713331	2713332	chr11:2713332:G:A	rs146188913	G	A	G	Hoxd9.mouse_homeodomain_1	0	1	+	8.678783717710262	7.889898683853121	GCCATAAAA
chr11	2734770	2734771	chr11:2734771:G:A	rs2839990	G	A	G	Hoxd9.mouse_homeodomain_1	0	1	+	7.1462160923678635	6.357331058510722	GCCATAAAC
chr11	2774232	2774233	chr11:2774233:C:T	chr11:2774233:C:T	C	T	C	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr11	2810569	2810570	chr11:2810570:G:A	rs186072636	G	A	G	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr11	3095950	3095951	chr11:3095951:C:T	rs1447183005	C	T	C	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr11	3101586	3101587	chr11:3101587:A:G	rs7106225	A	G	G	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr11	3154952	3154953	chr11:3154953:A:G	rs73414550	A	G	A	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr11	3339955	3339956	chr11:3339956:A:G	rs756673	A	G	A	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr11	3462791	3462792	chr11:3462792:A:G	rs7481079	A	G	N	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr11	3511641	3511642	chr11:3511642:G:T	rs7926283	G	T	-	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr11	3737234	3737235	chr11:3737235:T:G	rs535492909	T	G	T	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr11	3950463	3950464	chr11:3950464:A:G	rs116621460	A	G	A	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr11	3953622	3953623	chr11:3953623:T:C	rs73427533	T	C	T	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr11	3989711	3989712	chr11:3989712:A:C	chr11:3989712:A:C	A	C	A	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr11	4045167	4045168	chr11:4045168:G:A	rs10767811	G	A	G	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr11	4164803	4164804	chr11:4164804:C:T	rs7949512	C	T	T	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr11	4619771	4619772	chr11:4619772:C:T	rs73403432	C	T	C	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr11	4626344	4626345	chr11:4626345:T:A	rs75575948	T	A	A	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr11	4672216	4672217	chr11:4672217:G:A	rs12417964	G	A	A	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr11	4705456	4705457	chr11:4705457:C:T	rs10836495	C	T	C	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr11	4740921	4740922	chr11:4740922:A:G	rs10836566	A	G	G	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr11	4892296	4892297	chr11:4892297:C:T	chr11:4892297:C:T	C	T	C	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr11	5367871	5367872	chr11:5367872:T:A	rs2647610	T	A	T	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr11	5367889	5367890	chr11:5367890:T:C	rs11820654	T	C	T	Hoxd9.mouse_homeodomain_1	5	1	-	7.716978748812629	1.3427890305660735	GACATAAAA
chr11	5440760	5440761	chr11:5440761:C:A	rs1498486	C	A	C	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr11	5545837	5545838	chr11:5545838:C:G	rs12294369	C	G	G	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr11	5641817	5641818	chr11:5641818:T:A	rs11038488	T	A	T	Hoxd9.mouse_homeodomain_1	4	1	+	7.716978748812629	0.875160301482023	GACATAAAA
chr11	5818773	5818774	chr11:5818774:G:A	rs10769250	G	A	G	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr11	5838305	5838306	chr11:5838306:A:G	rs2167914	A	G	G	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr11	5838317	5838318	chr11:5838318:G:T	rs2167915	G	T	G	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr11	5982231	5982232	chr11:5982232:C:T	rs1006302563	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	-	8.099252595576761	7.3103675617196195	GCCATTAAA
chr11	6011626	6011627	chr11:6011627:G:A	rs7127525	G	A	g	Hoxd9.mouse_homeodomain_1	2	1	-	8.678783717710262	2.1913432600866263	GCCATAAAA
chr11	6350677	6350678	chr11:6350678:G:A	rs2682108	G	A	g	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr11	6486893	6486894	chr11:6486894:G:C	rs2256920	G	C	C	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr11	6612528	6612529	chr11:6612529:G:A	rs2659862	G	A	G	Hoxd9.mouse_homeodomain_1	8	1	-	7.1462160923678635	5.746270592944195	GCCATAAAC
chr11	6647569	6647570	chr11:6647570:C:T	rs11040942	C	T	C	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr11	6677175	6677176	chr11:6677176:T:C	rs142644037	T	C	T	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr11	6702187	6702188	chr11:6702188:A:G	rs10769712	A	G	A	Hoxd9.mouse_homeodomain_1	1	1	+	8.027213970992095	2.5794857111073646	CACATAAAA
chr11	6757880	6757881	chr11:6757881:A:G	rs12226233	A	G	A	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr11	7351567	7351568	chr11:7351568:T:C	rs6578851	T	C	C	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr11	7419358	7419359	chr11:7419359:G:T	rs11041367	G	T	G	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr11	7484677	7484678	chr11:7484678:A:G	rs10839792	A	G	G	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr11	7574945	7574946	chr11:7574946:T:G	chr11:7574946:T:G	T	G	T	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr11	7601668	7601669	chr11:7601669:T:G	rs12290692	T	G	G	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr11	7601669	7601670	chr11:7601670:T:C	rs12290693	T	C	C	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr11	7871363	7871364	chr11:7871364:G:A	rs4758247	G	A	A	Hoxd9.mouse_homeodomain_1	0	1	-	8.027213970992095	6.132666665683155	CACATAAAA
chr11	7883014	7883015	chr11:7883015:T:A	rs117447599	T	A	T	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr11	8075065	8075066	chr11:8075066:A:C	rs2360074	A	C	A	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr11	8227541	8227542	chr11:8227542:C:G	rs150642228	C	G	C	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr11	8227542	8227543	chr11:8227543:C:T	rs7482131	C	T	C	Hoxd9.mouse_homeodomain_1	8	1	-	7.522691831404475	8.98901893988973	CCCATAAAG
chr11	8288871	8288872	chr11:8288872:G:A	rs2100458	G	A	G	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr11	8652168	8652169	chr11:8652169:A:G	rs78737968	A	G	A	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr11	8795658	8795659	chr11:8795659:A:G	rs6484484	A	G	G	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr11	8870346	8870347	chr11:8870347:G:A	rs34842234	G	A	G	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr11	9090524	9090525	chr11:9090525:G:A	rs2742517	G	A	A	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr11	9232257	9232258	chr11:9232258:T:C	rs34729888	T	C	T	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr11	9461220	9461221	chr11:9461221:C:T	rs558841047	C	T	c	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr11	9461226	9461227	chr11:9461227:C:T	chr11:9461227:C:T	C	T	c	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr11	9575537	9575538	chr11:9575538:G:A	rs138618203	G	A	G	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr11	9609266	9609267	chr11:9609267:G:A	rs7950271	G	A	G	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr11	9672255	9672256	chr11:9672256:C:A	rs548548429	C	A	C	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr11	9701845	9701846	chr11:9701846:A:G	rs12789429	A	G	a	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr11	9703289	9703290	chr11:9703290:C:T	rs2572940	C	T	C	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr11	9703482	9703483	chr11:9703483:T:A	rs2572939	T	A	T	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr11	9711369	9711370	chr11:9711370:A:T	rs2572934	A	T	T	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr11	9825759	9825760	chr11:9825760:G:A	rs7115324	G	A	A	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr11	9902166	9902167	chr11:9902167:C:T	rs11608212	C	T	C	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr11	9914338	9914339	chr11:9914339:C:T	rs10840325	C	T	C	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr11	10382563	10382564	chr11:10382564:A:G	rs16907747	A	G	A	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr11	10397466	10397467	chr11:10397467:A:G	rs11042778	A	G	A	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr11	10412340	10412341	chr11:10412341:C:T	rs67457110	C	T	C	Hoxd9.mouse_homeodomain_1	5	1	+	7.091711387329735	8.409487817756228	CCCATCAAA
chr11	10412359	10412360	chr11:10412360:T:C	rs10840408	T	C	T	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr11	10496703	10496704	chr11:10496704:G:C	rs16907878	G	C	G	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr11	10518382	10518383	chr11:10518383:C:T	rs12279850	C	T	C	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr11	10556814	10556815	chr11:10556815:G:C	rs77335466	G	C	G	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr11	10582162	10582163	chr11:10582163:T:C	rs75913114	T	C	T	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr11	10659949	10659950	chr11:10659950:G:A	rs1895712	G	A	G	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr11	10669889	10669890	chr11:10669890:G:A	rs903824	G	A	G	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr11	10728984	10728985	chr11:10728985:G:A	rs1473538	G	A	A	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr11	10771047	10771048	chr11:10771048:C:G	rs61871739	C	G	C	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr11	10882195	10882196	chr11:10882196:G:T	rs61871961	G	T	G	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr11	10884296	10884297	chr11:10884297:G:A	rs12275453	G	A	A	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr11	10884314	10884315	chr11:10884315:G:T	rs7101508	G	T	G	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr11	11012402	11012403	chr11:11012403:G:A	rs10743163	G	A	G	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr11	11027728	11027729	chr11:11027729:T:G	rs10743166	T	G	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.889898683853121	1.3143905796496398	ACCATAAAA
chr11	11033904	11033905	chr11:11033905:C:A	rs9783282	C	A	C	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr11	11168039	11168040	chr11:11168040:C:G	rs68012483	C	G	C	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr11	11251074	11251075	chr11:11251075:C:G	rs116279104	C	G	C	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr11	11262628	11262629	chr11:11262629:C:T	rs78823944	C	T	C	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr11	11262640	11262641	chr11:11262641:C:T	rs570188099	C	T	C	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr11	11265312	11265313	chr11:11265313:T:C	rs57916812	T	C	T	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr11	11356907	11356908	chr11:11356908:C:T	rs10831602	C	T	C	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr11	11363911	11363912	chr11:11363912:T:C	rs7946518	T	C	T	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr11	11375059	11375060	chr11:11375060:C:T	rs72856607	C	T	C	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr11	11391469	11391470	chr11:11391470:C:T	rs4243928	C	T	C	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr11	11410726	11410727	chr11:11410727:G:A	rs76504964	G	A	G	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr11	11458575	11458576	chr11:11458576:T:C	rs111701291	T	C	T	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr11	11458585	11458586	chr11:11458586:G:C	rs4910348	G	C	G	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr11	11526158	11526159	chr11:11526159:A:G	rs11021899	A	G	A	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr11	11584204	11584205	chr11:11584205:G:A	rs61870386	G	A	G	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr11	11609881	11609882	chr11:11609882:C:T	rs7104225	C	T	C	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr11	11710456	11710457	chr11:11710457:C:A	rs16909992	C	A	C	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr11	11925397	11925398	chr11:11925398:C:G	rs189207474	C	G	C	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr11	11993564	11993565	chr11:11993565:A:G	rs6485351	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.98901893988973	7.654940340027237	CCCATAAAA
chr11	12079814	12079815	chr11:12079815:C:G	rs7949098	C	G	G	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr11	12079858	12079859	chr11:12079859:G:A	rs17382960	G	A	G	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr11	12150868	12150869	chr11:12150869:C:A	rs7943402	C	A	A	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr11	12163901	12163902	chr11:12163902:T:C	rs11603382	T	C	T	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr11	12167209	12167210	chr11:12167210:G:T	rs140974709	G	T	G	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr11	12192981	12192982	chr11:12192982:G:T	rs7949700	G	T	T	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr11	12201799	12201800	chr11:12201800:G:A	rs72866056	G	A	G	Hoxd9.mouse_homeodomain_1	0	1	+	8.678783717710262	7.889898683853121	GCCATAAAA
chr11	12201810	12201811	chr11:12201811:C:T	rs901283	C	T	C	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr11	12239859	12239860	chr11:12239860:A:G	rs3763885	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.287463081002919	6.953384481140425	CCAATAAAA
chr11	12248337	12248338	chr11:12248338:A:C	rs2706627	A	C	C	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr11	12271810	12271811	chr11:12271811:C:G	rs72869203	C	G	G	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr11	12278469	12278470	chr11:12278470:G:A	rs4757329	G	A	G	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr11	12403000	12403001	chr11:12403001:G:A	rs71479000	G	A	G	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr11	12483810	12483811	chr11:12483811:C:T	rs80153419	C	T	C	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr11	12508958	12508959	chr11:12508959:A:C	rs4757549	A	C	A	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr11	12574585	12574586	chr11:12574586:T:C	rs117407262	T	C	T	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr11	12599393	12599394	chr11:12599394:G:A	rs12283793	G	A	G	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr11	12684195	12684196	chr11:12684196:C:T	rs10765987	C	T	C	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr11	12704125	12704126	chr11:12704126:G:A	rs75378973	G	A	A	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr11	12802445	12802446	chr11:12802446:C:T	rs142584116	C	T	C	Hoxd9.mouse_homeodomain_1	1	1	+	7.522691831404475	6.207889917071467	CCCATAAAG
chr11	12803111	12803112	chr11:12803112:T:G	rs77840438	T	G	T	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr11	12913903	12913904	chr11:12913904:T:C	rs1866709	T	C	T	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr11	13109052	13109053	chr11:13109053:C:A	rs894135	C	A	C	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr11	13120532	13120533	chr11:13120533:A:G	rs17418644	A	G	A	Hoxd9.mouse_homeodomain_1	5	1	+	7.212456609225008	0.8382668909784519	GCCATAAAG
chr11	13120545	13120546	chr11:13120546:G:A	rs180855729	G	A	G	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr11	13216201	13216202	chr11:13216202:C:G	rs552137148	C	G	C	Hoxd9.mouse_homeodomain_1	1	1	+	6.943160709270972	0.5336274804886076	CCCATTAAG
chr11	13216203	13216204	chr11:13216204:A:G	rs116756476	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	6.943160709270972	5.60908210940848	CCCATTAAG
chr11	13494646	13494647	chr11:13494647:A:G	rs192802	A	G	a	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr11	13687604	13687605	chr11:13687605:C:G	rs151303435	C	G	C	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr11	13763280	13763281	chr11:13763281:T:G	rs12226666	T	G	G	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr11	13763598	13763599	chr11:13763599:C:T	rs11022956	C	T	C	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr11	13852041	13852042	chr11:13852042:A:C	rs16913252	A	C	A	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr11	13945219	13945220	chr11:13945220:G:A	rs61884786	G	A	G	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr11	13978693	13978694	chr11:13978694:C:A	rs2697844	C	A	C	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr11	14939102	14939103	chr11:14939103:C:T	rs10832324	C	T	C	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr11	14980952	14980953	chr11:14980953:T:G	rs16930784	T	G	G	Hoxd9.mouse_homeodomain_1	3	1	-	7.889898683853121	1.3143905796496398	ACCATAAAA
chr11	15044570	15044571	chr11:15044571:T:C	rs7482964	T	C	T	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr11	15053065	15053066	chr11:15053066:G:A	rs4077537	G	A	A	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr11	15213946	15213947	chr11:15213947:C:G	rs7129739	C	G	C	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr11	15552314	15552315	chr11:15552315:A:C	rs114594653	A	C	A	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr11	15640478	15640479	chr11:15640479:C:G	rs10766274	C	G	G	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr11	15674718	15674719	chr11:15674719:A:G	rs115442402	A	G	A	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr11	15719335	15719336	chr11:15719336:T:G	rs900863	T	G	T	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr11	15867725	15867726	chr11:15867726:G:A	rs11023749	G	A	G	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr11	16011063	16011064	chr11:16011064:A:G	rs11023826	A	G	A	Hoxd9.mouse_homeodomain_1	8	1	+	8.409487817756228	6.943160709270972	CCCATTAAA
chr11	16739537	16739538	chr11:16739538:G:T	rs773265726	G	T	G	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr11	16739561	16739562	chr11:16739562:C:G	rs3802963	C	G	G	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr11	16859633	16859634	chr11:16859634:T:C	rs112408862	T	C	T	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr11	17508915	17508916	chr11:17508916:C:A	rs1006099	C	A	C	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr11	17508936	17508937	chr11:17508937:G:A	rs7104083	G	A	G	Hoxd9.mouse_homeodomain_1	3	1	+	7.075409217893736	8.409487817756228	CCCGTTAAA
chr11	17752479	17752480	chr11:17752480:T:C	rs80286007	T	C	T	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr11	17752487	17752488	chr11:17752488:T:C	rs757512	T	C	C	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr11	17752488	17752489	chr11:17752489:G:A	rs10766430	G	A	A	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr11	17816568	17816569	chr11:17816569:C:T	rs2237944	C	T	C	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr11	17991889	17991890	chr11:17991890:C:G	chr11:17991890:C:G	C	G	C	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr11	18173800	18173801	chr11:18173801:C:T	rs11024532	C	T	c	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr11	18457730	18457731	chr11:18457731:C:T	rs187661984	C	T	C	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr11	18720495	18720496	chr11:18720496:A:G	rs12421865	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	7.9772278588234515	6.643149258960959	GCAATAAAA
chr11	18757138	18757139	chr11:18757139:C:T	rs34231294	C	T	C	Hoxd9.mouse_homeodomain_1	1	1	+	7.889898683853121	6.575096769520114	ACCATAAAA
chr11	18900511	18900512	chr11:18900512:A:G	chr11:18900512:A:G	A	G	-	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr11	18900519	18900520	chr11:18900520:G:C	rs1346013075	G	C	-	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr11	18956432	18956433	chr11:18956433:A:C	rs7105240	A	C	-	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr11	19027930	19027931	chr11:19027931:T:C	rs1039516	T	C	T	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr11	19426325	19426326	chr11:19426326:T:C	rs2702639	T	C	C	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr11	19461437	19461438	chr11:19461438:T:G	rs77444348	T	G	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.027213970992095	1.4517058667886147	CACATAAAA
chr11	19474041	19474042	chr11:19474042:A:G	rs2632036	A	G	G	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr11	19500453	19500454	chr11:19500454:T:C	rs1032191	T	C	C	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr11	19677753	19677754	chr11:19677754:G:A	rs73426604	G	A	G	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr11	19828347	19828348	chr11:19828348:T:C	rs1481388191	T	C	T	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr11	19952954	19952955	chr11:19952955:T:C	rs12272708	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.287463081002919	6.953384481140425	CCAATAAAA
chr11	19988075	19988076	chr11:19988076:C:T	rs12792546	C	T	C	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr11	20028312	20028313	chr11:20028313:A:G	rs4757880	A	G	A	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr11	20077852	20077853	chr11:20077853:G:T	rs6483641	G	T	G	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr11	20479105	20479106	chr11:20479106:C:G	rs7941826	C	G	C	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr11	20596488	20596489	chr11:20596489:A:T	rs16906511	A	T	T	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr11	20937882	20937883	chr11:20937883:T:C	rs1880087	T	C	T	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr11	21063342	21063343	chr11:21063343:T:C	rs77664186	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.287463081002919	6.953384481140425	CCAATAAAA
chr11	21719634	21719635	chr11:21719635:A:G	rs1459881	A	G	A	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr11	21727464	21727465	chr11:21727465:G:C	rs138866183	G	C	G	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr11	21943476	21943477	chr11:21943477:C:T	rs115518391	C	T	C	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr11	22414642	22414643	chr11:22414643:G:A	rs932085	G	A	A	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr11	22414654	22414655	chr11:22414655:T:A	rs932084	T	A	A	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr11	22454266	22454267	chr11:22454267:C:T	rs2671122	C	T	T	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr11	23055668	23055669	chr11:23055669:A:G	rs10766998	A	G	A	Hoxd9.mouse_homeodomain_1	4	1	-	7.889898683853121	5.234852038990543	ACCATAAAA
chr11	23081023	23081024	chr11:23081024:T:C	rs2433574	T	C	T	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr11	23081030	23081031	chr11:23081031:T:C	rs7105837	T	C	T	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr11	23378539	23378540	chr11:23378540:C:T	rs67047651	C	T	T	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr11	23513620	23513621	chr11:23513621:G:A	rs2008816	G	A	A	Hoxd9.mouse_homeodomain_1	0	1	-	8.409487817756228	6.514940512447287	CCCATTAAA
chr11	24198686	24198687	chr11:24198687:A:G	rs370099457	A	G	A	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr11	24324587	24324588	chr11:24324588:A:G	rs79086270	A	G	A	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr11	24562552	24562553	chr11:24562553:A:G	rs1912145	A	G	G	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr11	24635053	24635054	chr11:24635054:G:A	rs2136478	G	A	G	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr11	24734948	24734949	chr11:24734949:G:A	rs11028129	G	A	G	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr11	24901196	24901197	chr11:24901197:C:T	rs10767273	C	T	T	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr11	24926074	24926075	chr11:24926075:C:T	rs117727000	C	T	C	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr11	25095008	25095009	chr11:25095009:G:C	rs61894712	G	C	C	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr11	25165371	25165372	chr11:25165372:C:G	rs10742068	C	G	C	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr11	25548301	25548302	chr11:25548302:G:T	rs1838075	G	T	G	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr11	25745944	25745945	chr11:25745945:C:A	rs191259087	C	A	c	Hoxd9.mouse_homeodomain_1	0	1	-	7.9772278588234515	6.392915775693977	GCAATAAAA
chr11	25765304	25765305	chr11:25765305:G:A	rs16914584	G	A	G	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr11	25923821	25923822	chr11:25923822:C:T	rs72875025	C	T	C	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr11	26000563	26000564	chr11:26000564:C:T	rs12291311	C	T	c	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr11	26086537	26086538	chr11:26086538:G:A	rs11029165	G	A	G	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr11	26228215	26228216	chr11:26228216:G:A	rs11605852	G	A	A	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr11	26228236	26228237	chr11:26228237:C:T	rs1870757	C	T	T	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr11	26276811	26276812	chr11:26276812:A:G	rs58109899	A	G	A	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr11	26522942	26522943	chr11:26522943:G:A	rs368786	G	A	.	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr11	26618557	26618558	chr11:26618558:G:C	rs10835023	G	C	G	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr11	26748088	26748089	chr11:26748089:T:G	rs10501068	T	G	T	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr11	27088644	27088645	chr11:27088645:T:C	rs4923423	T	C	C	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr11	27090794	27090795	chr11:27090795:C:T	rs767819936	C	T	C	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr11	27118651	27118652	chr11:27118652:G:A	rs972904	G	A	A	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr11	27148181	27148182	chr11:27148182:C:G	rs1020274	C	G	C	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr11	27202068	27202069	chr11:27202069:G:A	rs10835127	G	A	G	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr11	27202072	27202073	chr11:27202073:T:C	rs6484272	T	C	C	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr11	27296917	27296918	chr11:27296918:C:G	rs10767632	C	G	C	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr11	27395061	27395062	chr11:27395062:T:C	rs114862716	T	C	T	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr11	27874580	27874581	chr11:27874581:C:G	rs4922800	C	G	C	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr11	28072773	28072774	chr11:28072774:A:C	rs76795988	A	C	C	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr11	28166025	28166026	chr11:28166026:G:C	rs11030232	G	C	G	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr11	28269030	28269031	chr11:28269031:T:C	rs17571754	T	C	T	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr11	28505470	28505471	chr11:28505471:C:T	rs116234016	C	T	C	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr11	28505473	28505474	chr11:28505474:C:T	rs182558657	C	T	C	Hoxd9.mouse_homeodomain_1	1	1	+	8.409487817756228	7.094685903423221	CCCATTAAA
chr11	28915597	28915598	chr11:28915598:A:T	rs991487	A	T	A	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr11	29066454	29066455	chr11:29066455:T:G	chr11:29066455:T:G	T	G	T	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr11	30174343	30174344	chr11:30174344:A:G	rs1879363	A	G	A	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr11	30333309	30333310	chr11:30333310:T:C	rs12278547	T	C	T	Hoxd9.mouse_homeodomain_1	5	1	-	8.287463081002919	1.9132733627563638	CCAATAAAA
chr11	30345784	30345785	chr11:30345785:T:C	rs1538109	T	C	c	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr11	30429752	30429753	chr11:30429753:G:A	rs35401549	G	A	G	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr11	30451999	30452000	chr11:30452000:G:T	rs72885520	G	T	G	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr11	30550097	30550098	chr11:30550098:T:G	rs550708753	T	G	T	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr11	30740416	30740417	chr11:30740417:A:C	rs584591	A	C	C	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr11	31199164	31199165	chr11:31199165:C:T	rs158136	C	T	C	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr11	31434058	31434059	chr11:31434059:T:A	rs56404006	T	A	T	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr11	31828067	31828068	chr11:31828068:T:G	rs3026344	T	G	t	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr11	31987095	31987096	chr11:31987096:C:G	rs1005544	C	G	C	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr11	32100473	32100474	chr11:32100474:T:G	rs2073223	T	G	G	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr11	32143609	32143610	chr11:32143610:T:C	rs2235998	T	C	T	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr11	32229231	32229232	chr11:32229232:T:C	rs926968	T	C	T	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr11	32256566	32256567	chr11:32256567:A:G	rs7938894	A	G	G	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr11	32437077	32437078	chr11:32437078:G:A	rs5030118	G	A	G	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr11	32440659	32440660	chr11:32440660:G:C	rs11031787	G	C	G	Hoxd9.mouse_homeodomain_1	8	1	+	7.212456609225008	7.1462160923678635	GCCATAAAG
chr11	32721896	32721897	chr11:32721897:T:G	rs116857334	T	G	T	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr11	33417288	33417289	chr11:33417289:A:G	rs34930127	A	G	A	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr11	33489716	33489717	chr11:33489717:C:T	rs74387056	C	T	C	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr11	33690276	33690277	chr11:33690277:T:G	chr11:33690277:T:G	T	G	T	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr11	33690319	33690320	chr11:33690320:G:A	chr11:33690320:G:A	G	A	G	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr11	33771860	33771861	chr11:33771861:C:G	rs56026019	C	G	C	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr11	33949365	33949366	chr11:33949366:C:A	rs11032461	C	A	C	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr11	34030702	34030703	chr11:34030703:G:C	rs185533586	G	C	G	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr11	34226266	34226267	chr11:34226267:C:T	rs4756117	C	T	C	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr11	34308952	34308953	chr11:34308953:G:T	rs12800573	G	T	G	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr11	34418284	34418285	chr11:34418285:C:T	rs11032679	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	-	7.1462160923678635	6.357331058510722	GCCATAAAC
chr11	34418318	34418319	chr11:34418319:C:T	rs11032680	C	T	C	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr11	34418332	34418333	chr11:34418333:C:G	rs12790378	C	G	C	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr11	34427061	34427062	chr11:34427062:T:G	rs208677	T	G	G	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr11	34445942	34445943	chr11:34445943:T:C	rs482322	T	C	C	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr11	34593339	34593340	chr11:34593340:T:C	rs2100396	T	C	T	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr11	34917744	34917745	chr11:34917745:G:A	rs3763926	G	A	G	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr11	34973398	34973399	chr11:34973399:C:T	rs12805200	C	T	C	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr11	34977443	34977444	chr11:34977444:A:G	rs191497994	A	G	A	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr11	34977478	34977479	chr11:34977479:C:T	rs150899617	C	T	C	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr11	34977479	34977480	chr11:34977480:A:G	rs184067071	A	G	A	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr11	35009523	35009524	chr11:35009524:G:A	rs185001832	G	A	G	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr11	35132039	35132040	chr11:35132040:C:T	rs73451401	C	T	C	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr11	35132051	35132052	chr11:35132052:A:G	rs598725	A	G	A	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr11	35170143	35170144	chr11:35170144:C:A	rs7937602	C	A	C	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr11	35223739	35223740	chr11:35223740:G:T	rs10836344	G	T	T	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr11	35225317	35225318	chr11:35225318:A:G	rs2421825	A	G	G	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr11	35242833	35242834	chr11:35242834:C:A	rs11033042	C	A	G	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr11	35257549	35257550	chr11:35257550:T:A	rs115591714	T	A	T	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr11	35281409	35281410	chr11:35281410:C:T	rs116465679	C	T	C	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr11	35332789	35332790	chr11:35332790:C:G	rs10768127	C	G	G	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr11	35367939	35367940	chr11:35367940:C:T	rs4287314	C	T	T	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr11	35436722	35436723	chr11:35436723:A:T	rs596573	A	T	A	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr11	35545411	35545412	chr11:35545412:A:G	rs11033168	A	G	G	Hoxd9.mouse_homeodomain_1	8	1	+	7.9772278588234515	6.510900750338196	GCAATAAAA
chr11	35545812	35545813	chr11:35545813:T:C	rs11033170	T	C	T	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr11	35616122	35616123	chr11:35616123:C:T	rs12418696	C	T	C	Hoxd9.mouse_homeodomain_1	2	1	+	8.678783717710262	2.1913432600866263	GCCATAAAA
chr11	35992218	35992219	chr11:35992219:C:A	rs146192735	C	A	C	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr11	36104880	36104881	chr11:36104881:A:G	rs137857591	A	G	A	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr11	36223270	36223271	chr11:36223271:A:G	rs61881477	A	G	A	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr11	36386372	36386373	chr11:36386373:A:G	rs635368	A	G	G	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr11	36420794	36420795	chr11:36420795:T:G	rs77858653	T	G	T	Hoxd9.mouse_homeodomain_1	7	1	-	8.027213970992095	5.137798200961511	CACATAAAA
chr11	36420798	36420799	chr11:36420799:T:C	rs10836557	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.027213970992095	6.693135371129603	CACATAAAA
chr11	36420810	36420811	chr11:36420811:A:G	rs80176087	A	G	A	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr11	36635691	36635692	chr11:36635692:G:T	rs728875	G	T	T	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr11	36874730	36874731	chr11:36874731:A:G	rs4517489	A	G	A	Hoxd9.mouse_homeodomain_1	5	1	+	7.9772278588234515	1.603038140576896	GCAATAAAA
chr11	37069634	37069635	chr11:37069635:C:T	rs974284	C	T	T	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr11	37178126	37178127	chr11:37178127:A:G	rs7106759	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	7.889898683853121	6.555820083990628	ACCATAAAA
chr11	37224690	37224691	chr11:37224691:G:A	rs77228878	G	A	G	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr11	37695464	37695465	chr11:37695465:A:G	rs2126329	A	G	A	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr11	38163755	38163756	chr11:38163756:A:G	rs74960678	A	G	A	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr11	38547347	38547348	chr11:38547348:G:T	rs1038252	G	T	G	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr11	39250121	39250122	chr11:39250122:A:T	rs11035182	A	T	T	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr11	39960741	39960742	chr11:39960742:C:T	rs10837313	C	T	T	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr11	40202798	40202799	chr11:40202799:C:T	rs10837366	C	T	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.075409217893736	8.409487817756228	CCCGTTAAA
chr11	40387734	40387735	chr11:40387735:G:A	rs10837395	G	A	G	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr11	40388362	40388363	chr11:40388363:A:G	rs11605725	A	G	A	Hoxd9.mouse_homeodomain_1	6	1	+	7.889898683853121	1.18607273726139	ACCATAAAA
chr11	40559952	40559953	chr11:40559953:G:A	rs1495310	G	A	A	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr11	40871025	40871026	chr11:40871026:G:A	rs61886585	G	A	G	Hoxd9.mouse_homeodomain_1	1	1	-	7.889898683853121	6.575096769520114	ACCATAAAA
chr11	40959783	40959784	chr11:40959784:T:C	rs355231	T	C	C	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr11	41113254	41113255	chr11:41113255:T:C	rs16935353	T	C	T	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr11	41378150	41378151	chr11:41378151:A:T	rs2958835	A	T	A	Hoxd9.mouse_homeodomain_1	5	1	+	7.9772278588234515	7.39769673668995	GCAATAAAA
chr11	41398473	41398474	chr11:41398474:T:C	rs16935673	T	C	T	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr11	41437153	41437154	chr11:41437154:A:C	chr11:41437154:A:C	A	C	A	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr11	41518009	41518010	chr11:41518010:C:T	rs143402980	C	T	C	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr11	41826476	41826477	chr11:41826477:G:A	chr11:41826477:G:A	G	A	G	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr11	42113018	42113019	chr11:42113019:C:A	rs10837779	C	A	C	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr11	42415571	42415572	chr11:42415572:G:T	rs4237694	G	T	G	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr11	42466439	42466440	chr11:42466440:A:G	rs75803709	A	G	G	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr11	42555454	42555455	chr11:42555455:A:G	chr11:42555455:A:G	A	G	A	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr11	42596981	42596982	chr11:42596982:A:T	rs74534825	A	T	A	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr11	42625983	42625984	chr11:42625984:G:A	rs4322380	G	A	G	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr11	42700936	42700937	chr11:42700937:A:G	rs11037017	A	G	A	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr11	42895679	42895680	chr11:42895680:C:T	rs1489213	C	T	T	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr11	42934243	42934244	chr11:42934244:A:C	rs1489214	A	C	C	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr11	43581749	43581750	chr11:43581750:T:C	rs11820132	T	C	T	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr11	43626817	43626818	chr11:43626818:T:G	rs4237643	T	G	G	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr11	43996752	43996753	chr11:43996753:A:G	rs7120255	A	G	G	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr11	44028551	44028552	chr11:44028552:C:T	rs11037815	C	T	c	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr11	44454067	44454068	chr11:44454068:A:G	rs4755836	A	G	G	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr11	44464635	44464636	chr11:44464636:C:T	rs36015136	C	T	C	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr11	44470838	44470839	chr11:44470839:C:T	rs56141710	C	T	C	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr11	44779355	44779356	chr11:44779356:G:A	rs1869275	G	A	G	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr11	44779379	44779380	chr11:44779380:T:C	rs910460001	T	C	T	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr11	44885654	44885655	chr11:44885655:A:G	rs77397762	A	G	A	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr11	44887897	44887898	chr11:44887898:T:G	rs75381474	T	G	T	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr11	44899864	44899865	chr11:44899865:T:G	rs12289701	T	G	G	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr11	44931378	44931379	chr11:44931379:G:A	rs3740789	G	A	G	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr11	44940588	44940589	chr11:44940589:G:A	rs114393736	G	A	A	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr11	45055316	45055317	chr11:45055317:A:C	rs11822283	A	C	C	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr11	45086408	45086409	chr11:45086409:C:T	rs554301702	C	T	C	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr11	45479182	45479183	chr11:45479183:C:T	rs148266262	C	T	C	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr11	45514780	45514781	chr11:45514781:T:A	rs61880601	T	A	T	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr11	45773257	45773258	chr11:45773258:A:G	rs16938365	A	G	A	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr11	46846327	46846328	chr11:46846328:A:G	rs190968491	A	G	A	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr11	46948654	46948655	chr11:46948655:T:G	rs892236999	T	G	T	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr11	47443542	47443543	chr11:47443543:T:C	rs4752836	T	C	C	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr11	47539922	47539923	chr11:47539923:G:A	rs533729320	G	A	G	Hoxd9.mouse_homeodomain_1	2	1	-	7.716978748812629	1.2295382911889927	GACATAAAA
chr11	47659530	47659531	chr11:47659531:G:A	rs11608017	G	A	G	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr11	47955329	47955330	chr11:47955330:A:G	rs7936879	A	G	A	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr11	48098191	48098192	chr11:48098192:C:T	rs12574209	C	T	C	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr11	49562431	49562432	chr11:49562432:T:C	rs67654195	T	C	T	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr11	50553938	50553939	chr11:50553939:C:T	rs8186182	C	T	.	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr11	52785090	52785091	chr11:52785091:G:T	rs1373783447	G	T	.	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr11	53461113	53461114	chr11:53461114:G:C	rs1367558198	G	C	.	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr11	53965938	53965939	chr11:53965939:A:T	rs1289867524	A	T	.	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr11	54258183	54258184	chr11:54258184:G:T	rs1334006304	G	T	.	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr11	54351347	54351348	chr11:54351348:A:C	rs1231529593	A	C	.	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr11	55610420	55610421	chr11:55610421:A:G	rs1246070482	A	G	A	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr11	55964041	55964042	chr11:55964042:T:G	rs61895243	T	G	G	Hoxd9.mouse_homeodomain_1	8	1	-	7.241935125048919	5.709367499706518	CCCATACAA
chr11	56441727	56441728	chr11:56441728:C:A	rs661090	C	A	A	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr11	56967899	56967900	chr11:56967900:C:A	rs1792472	C	A	C	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr11	57072693	57072694	chr11:57072694:G:T	rs182200162	G	T	G	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr11	57279822	57279823	chr11:57279823:T:G	rs12788046	T	G	T	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr11	57325926	57325927	chr11:57325927:A:G	rs144595219	A	G	A	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr11	57325938	57325939	chr11:57325939:A:G	rs76688067	A	G	A	Hoxd9.mouse_homeodomain_1	5	1	+	8.287463081002919	1.9132733627563638	CCAATAAAA
chr11	57556667	57556668	chr11:57556668:T:C	rs72925976	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.889898683853121	6.555820083990628	ACCATAAAA
chr11	57556684	57556685	chr11:57556685:A:G	rs2848621	A	G	A	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr11	57644268	57644269	chr11:57644269:C:T	rs2081361	C	T	C	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr11	57712391	57712392	chr11:57712392:T:C	rs1424753	T	C	C	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr11	57712416	57712417	chr11:57712417:C:T	rs183291396	C	T	C	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr11	57793633	57793634	chr11:57793634:G:T	rs501054	G	T	G	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr11	58143021	58143022	chr11:58143022:A:G	rs183525692	A	G	a	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr11	58532432	58532433	chr11:58532433:T:C	rs12790816	T	C	T	Hoxd9.mouse_homeodomain_1	6	1	-	7.716978748812629	1.0131528022208975	GACATAAAA
chr11	58607418	58607419	chr11:58607419:C:G	rs12792832	C	G	C	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr11	58654115	58654116	chr11:58654116:A:G	rs1009173	A	G	G	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr11	59175248	59175249	chr11:59175249:A:G	rs79457261	A	G	A	Hoxd9.mouse_homeodomain_1	7	1	+	7.45645131454733	0.752625367955599	CCCATAAAC
chr11	59186327	59186328	chr11:59186328:A:C	rs975949956	A	C	A	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr11	59274316	59274317	chr11:59274317:C:T	rs116572689	C	T	C	Hoxd9.mouse_homeodomain_1	6	1	+	7.241935125048919	6.099603169859144	CCCATACAA
chr11	59465682	59465683	chr11:59465683:A:G	rs137993351	A	G	A	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr11	59556507	59556508	chr11:59556508:G:A	rs7952380	G	A	.	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr11	59616278	59616279	chr11:59616279:G:A	rs114054338	G	A	G	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr11	59732887	59732888	chr11:59732888:T:C	rs116905561	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.287463081002919	6.953384481140425	CCAATAAAA
chr11	59919204	59919205	chr11:59919205:G:A	rs112726180	G	A	G	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr11	60334307	60334308	chr11:60334308:A:C	rs541943249	A	C	A	Hoxd9.mouse_homeodomain_1	8	1	+	8.98901893988973	7.45645131454733	CCCATAAAA
chr11	60343272	60343273	chr11:60343273:C:T	rs2017738	C	T	A	Hoxd9.mouse_homeodomain_1	0	1	-	8.099252595576761	7.3103675617196195	GCCATTAAA
chr11	60343275	60343276	chr11:60343276:G:T	chr11:60343276:G:T	G	T	G	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr11	60389883	60389884	chr11:60389884:G:A	rs17154896	G	A	G	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr11	60446188	60446189	chr11:60446189:A:T	rs77351852	A	T	A	Hoxd9.mouse_homeodomain_1	6	1	+	8.099252595576761	5.209836825546175	GCCATTAAA
chr11	60895936	60895937	chr11:60895937:C:G	rs4939473	C	G	c	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr11	60911190	60911191	chr11:60911191:G:A	chr11:60911191:G:A	G	A	G	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr11	61037679	61037680	chr11:61037680:C:T	rs72928555	C	T	C	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr11	61097670	61097671	chr11:61097671:C:T	rs577736988	C	T	C	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr11	61108433	61108434	chr11:61108434:T:C	rs17155674	T	C	T	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr11	61147965	61147966	chr11:61147966:T:C	rs678305	T	C	C	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr11	61153621	61153622	chr11:61153622:C:T	rs98696	C	T	t	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr11	61430597	61430598	chr11:61430598:A:G	rs116799145	A	G	a	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr11	61978480	61978481	chr11:61978481:G:A	rs2028062	G	A	A	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr11	62015960	62015961	chr11:62015961:A:C	rs17156751	A	C	A	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr11	62337386	62337387	chr11:62337387:T:G	rs558064166	T	G	T	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr11	62337388	62337389	chr11:62337389:G:C	rs571604129	G	C	G	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr11	62337405	62337406	chr11:62337406:G:A	rs553778254	G	A	G	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr11	62344370	62344371	chr11:62344371:T:G	rs147094663	T	G	T	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr11	62380204	62380205	chr11:62380205:G:A	rs148619450	G	A	G	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr11	62393621	62393622	chr11:62393622:G:A	rs1008394580	G	A	g	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr11	62791140	62791141	chr11:62791141:C:A	rs190459763	C	A	C	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr11	62831880	62831881	chr11:62831881:A:T	rs551133512	A	T	A	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr11	62831882	62831883	chr11:62831883:T:C	rs114516590	T	C	T	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr11	62831889	62831890	chr11:62831890:C:T	rs73487820	C	T	C	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr11	63001510	63001511	chr11:63001511:C:A	rs984008563	C	A	C	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr11	63514296	63514297	chr11:63514297:C:T	rs57247740	C	T	C	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr11	63557728	63557729	chr11:63557729:A:C	rs9943597	A	C	c	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr11	63574806	63574807	chr11:63574807:G:A	rs78667939	G	A	G	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr11	63681085	63681086	chr11:63681086:G:A	rs113755620	G	A	G	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr11	63781101	63781102	chr11:63781102:A:G	rs476034	A	G	G	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr11	63851627	63851628	chr11:63851628:T:C	rs75177605	T	C	T	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr11	64023458	64023459	chr11:64023459:C:T	rs484201	C	T	T	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr11	64095409	64095410	chr11:64095410:G:C	rs11231694	G	C	G	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr11	64242505	64242506	chr11:64242506:A:G	chr11:64242506:A:G	A	G	A	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr11	64242539	64242540	chr11:64242540:C:G	chr11:64242540:C:G	C	G	C	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr11	64473288	64473289	chr11:64473289:A:T	rs112697272	A	T	A	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr11	65096156	65096157	chr11:65096157:G:A	rs116522417	G	A	G	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr11	65822917	65822918	chr11:65822918:C:A	rs11227315	C	A	C	Hoxd9.mouse_homeodomain_1	0	1	+	7.45645131454733	6.357331058510722	CCCATAAAC
chr11	65856794	65856795	chr11:65856795:T:C	rs79486948	T	C	T	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr11	66079522	66079523	chr11:66079523:T:A	rs1440881331	T	A	T	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr11	66084261	66084262	chr11:66084262:C:G	rs10896077	C	G	C	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr11	66114126	66114127	chr11:66114127:G:A	rs188521611	G	A	G	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr11	66133175	66133176	chr11:66133176:G:A	rs72934674	G	A	G	Hoxd9.mouse_homeodomain_1	2	1	-	7.212456609225008	0.7250161516013711	GCCATAAAG
chr11	67579205	67579206	chr11:67579206:T:C	rs147003630	T	C	T	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr11	67581848	67581849	chr11:67581849:C:T	rs7949394	C	T	C	Hoxd9.mouse_homeodomain_1	3	1	-	7.34470511784777	8.678783717710262	GCCGTAAAA
chr11	67646373	67646374	chr11:67646374:C:T	rs115753027	C	T	C	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr11	67803583	67803584	chr11:67803584:C:T	rs111348682	C	T	-	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr11	67884785	67884786	chr11:67884786:T:C	rs184325773	T	C	-	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr11	68036606	68036607	chr11:68036607:C:T	rs1051806	C	T	C	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr11	68036632	68036633	chr11:68036633:A:G	rs61329983	A	G	G	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr11	68223513	68223514	chr11:68223514:A:G	rs367780406	A	G	A	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr11	68418923	68418924	chr11:68418924:C:T	rs546803	C	T	T	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr11	68934110	68934111	chr11:68934111:T:C	rs751879	T	C	T	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr11	69208318	69208319	chr11:69208319:C:T	rs7942465	C	T	C	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr11	69305920	69305921	chr11:69305921:C:T	rs113561135	C	T	C	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr11	69417107	69417108	chr11:69417108:A:G	rs7943577	A	G	A	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr11	69559519	69559520	chr11:69559520:C:T	rs11263496	C	T	C	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr11	69744781	69744782	chr11:69744782:C:T	rs113545357	C	T	C	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr11	69744797	69744798	chr11:69744798:C:T	chr11:69744798:C:T	C	T	C	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr11	69746677	69746678	chr11:69746678:C:T	rs9665762	C	T	C	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr11	69780199	69780200	chr11:69780200:T:C	rs9666670	T	C	C	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr11	69825495	69825496	chr11:69825496:G:T	rs75974875	G	T	G	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr11	69845461	69845462	chr11:69845462:A:G	rs73525645	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	7.716978748812629	6.382900148950135	GACATAAAA
chr11	69888671	69888672	chr11:69888672:G:C	rs6598097	G	C	C	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr11	69949312	69949313	chr11:69949313:C:G	rs112419492	C	G	C	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr11	69952680	69952681	chr11:69952681:G:C	rs533495590	G	C	G	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr11	70040542	70040543	chr11:70040543:G:A	rs112870798	G	A	G	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr11	70093356	70093357	chr11:70093357:G:A	rs72939383	G	A	G	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr11	70093367	70093368	chr11:70093368:T:C	rs10792699	T	C	C	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr11	70359476	70359477	chr11:70359477:T:C	rs113303133	T	C	T	Hoxd9.mouse_homeodomain_1	5	1	-	8.98901893988973	2.6148292216431743	CCCATAAAA
chr11	70533930	70533931	chr11:70533931:G:A	rs995798047	G	A	A	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr11	70573140	70573141	chr11:70573141:T:A	rs9888288	T	A	A	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr11	71153299	71153300	chr11:71153300:G:A	rs191621131	G	A	-	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr11	71208437	71208438	chr11:71208438:G:A	rs2919744	G	A	G	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr11	71214234	71214235	chr11:71214235:T:C	rs749035	T	C	T	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr11	71232255	71232256	chr11:71232256:A:T	rs3020025	A	T	A	Hoxd9.mouse_homeodomain_1	6	1	+	8.678783717710262	5.789367947679677	GCCATAAAA
chr11	71284414	71284415	chr11:71284415:T:C	rs79765070	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.027213970992095	6.693135371129603	CACATAAAA
chr11	71284432	71284433	chr11:71284433:C:A	rs9804682	C	A	C	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr11	71319886	71319887	chr11:71319887:T:C	rs1441128	T	C	C	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr11	71338791	71338792	chr11:71338792:C:T	rs782600463	C	T	C	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr11	71386473	71386474	chr11:71386474:A:G	rs12418332	A	G	A	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr11	71416416	71416417	chr11:71416417:C:T	rs1792260	C	T	C	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr11	71451830	71451831	chr11:71451831:A:G	rs59601821	A	G	A	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr11	71460123	71460124	chr11:71460124:T:C	rs12807718	T	C	C	Hoxd9.mouse_homeodomain_1	7	1	-	8.98901893988973	2.285192993297999	CCCATAAAA
chr11	71551904	71551905	chr11:71551905:A:G	rs4129753	A	G	g	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr11	71568306	71568307	chr11:71568307:C:T	rs118079461	C	T	C	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr11	71577255	71577256	chr11:71577256:G:C	rs11601727	G	C	g	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr11	71710720	71710721	chr11:71710721:G:A	rs11234603	G	A	g	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr11	71789290	71789291	chr11:71789291:G:A	rs9736266	G	A	g	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr11	72082165	72082166	chr11:72082166:C:G	rs686340	C	G	G	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr11	72140522	72140523	chr11:72140523:T:C	rs623585	T	C	T	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr11	72140974	72140975	chr11:72140975:G:C	rs114683364	G	C	G	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr11	72223373	72223374	chr11:72223374:T:G	rs12280967	T	G	T	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr11	72351425	72351426	chr11:72351426:G:A	rs144320211	G	A	G	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr11	72856867	72856868	chr11:72856868:T:C	rs1192133431	T	C	T	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr11	73153306	73153307	chr11:73153307:C:T	rs11823385	C	T	C	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr11	73228895	73228896	chr11:73228896:T:G	rs1790070	T	G	G	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr11	73330293	73330294	chr11:73330294:T:C	rs79778136	T	C	T	Hoxd9.mouse_homeodomain_1	8	1	-	7.9772278588234515	6.510900750338196	GCAATAAAA
chr11	73343955	73343956	chr11:73343956:C:T	rs555057682	C	T	C	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr11	73439673	73439674	chr11:73439674:C:G	rs926480220	C	G	C	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr11	73786900	73786901	chr11:73786901:T:C	rs11235905	T	C	T	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr11	73983232	73983233	chr11:73983233:G:A	rs1043310659	G	A	G	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr11	73983260	73983261	chr11:73983261:C:G	rs539150718	C	G	C	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr11	74044745	74044746	chr11:74044746:A:C	rs55793503	A	C	C	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr11	74370455	74370456	chr11:74370456:G:A	rs10793079	G	A	G	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr11	74381357	74381358	chr11:74381358:T:C	rs10793081	T	C	T	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr11	74399282	74399283	chr11:74399283:A:G	rs10437738	A	G	A	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr11	74399289	74399290	chr11:74399290:G:A	rs60917039	G	A	G	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr11	74708117	74708118	chr11:74708118:T:G	rs1944936	T	G	T	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr11	74877385	74877386	chr11:74877386:T:C	rs114783552	T	C	T	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr11	74988147	74988148	chr11:74988148:C:T	rs997465	C	T	C	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr11	75120911	75120912	chr11:75120912:C:G	rs2510661	C	G	g	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr11	75454382	75454383	chr11:75454383:A:G	rs79025449	A	G	A	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr11	75708597	75708598	chr11:75708598:A:G	rs636479	A	G	A	Hoxd9.mouse_homeodomain_1	4	1	-	7.1462160923678635	4.491169447505284	GCCATAAAC
chr11	75967053	75967054	chr11:75967054:C:G	rs56174731	C	G	C	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr11	76084224	76084225	chr11:76084225:C:G	rs113485611	C	G	C	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr11	76250675	76250676	chr11:76250676:C:T	rs112960529	C	T	T	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr11	76291163	76291164	chr11:76291164:T:C	rs72994416	T	C	T	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr11	76609475	76609476	chr11:76609476:C:T	rs139546494	C	T	C	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr11	76678206	76678207	chr11:76678207:G:A	rs11236851	G	A	G	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr11	76953669	76953670	chr11:76953670:G:T	rs11237031	G	T	t	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr11	77082687	77082688	chr11:77082688:C:T	rs11607352	C	T	C	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr11	77093084	77093085	chr11:77093085:G:A	rs6592705	G	A	A	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr11	77140992	77140993	chr11:77140993:T:C	rs4945149	T	C	T	Hoxd9.mouse_homeodomain_1	5	1	-	8.027213970992095	1.6530242527455408	CACATAAAA
chr11	77747861	77747862	chr11:77747862:G:T	rs58393579	G	T	G	Hoxd9.mouse_homeodomain_1	0	1	+	7.9772278588234515	6.392915775693977	GCAATAAAA
chr11	78030832	78030833	chr11:78030833:C:T	rs527670613	C	T	C	Hoxd9.mouse_homeodomain_1	2	1	+	7.241935125048919	0.7544946674252814	CCCATACAA
chr11	78154914	78154915	chr11:78154915:A:G	rs637149	A	G	A	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr11	78262933	78262934	chr11:78262934:C:T	rs2511158	C	T	C	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr11	78416602	78416603	chr11:78416603:G:A	rs999590266	G	A	G	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr11	78667779	78667780	chr11:78667780:A:G	rs11237582	A	G	G	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr11	78852291	78852292	chr11:78852292:A:G	rs142496186	A	G	A	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr11	78933535	78933536	chr11:78933536:C:T	rs677624	C	T	C	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr11	78933565	78933566	chr11:78933566:C:T	rs79506940	C	T	C	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr11	79051277	79051278	chr11:79051278:C:T	rs76748981	C	T	c	Hoxd9.mouse_homeodomain_1	3	1	-	7.654940340027237	8.98901893988973	CCCGTAAAA
chr11	79213573	79213574	chr11:79213574:A:G	rs676026	A	G	A	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr11	79237212	79237213	chr11:79237213:C:T	rs487724	C	T	C	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr11	79470558	79470559	chr11:79470559:A:G	rs6592843	A	G	G	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr11	79471141	79471142	chr11:79471142:A:G	rs11605311	A	G	A	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr11	79784156	79784157	chr11:79784157:T:C	rs17835798	T	C	T	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr11	80298042	80298043	chr11:80298043:C:T	rs11232051	C	T	C	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr11	80298052	80298053	chr11:80298053:T:G	rs7396396	T	G	T	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr11	80532673	80532674	chr11:80532674:C:T	rs56379571	C	T	C	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr11	80582905	80582906	chr11:80582906:G:A	rs1968681	G	A	A	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr11	80613946	80613947	chr11:80613947:C:T	rs11232245	C	T	C	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr11	80884369	80884370	chr11:80884370:G:A	rs76553025	G	A	A	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr11	81261945	81261946	chr11:81261946:A:C	rs945226885	A	C	A	Hoxd9.mouse_homeodomain_1	6	1	+	8.678783717710262	6.931699902869452	GCCATAAAA
chr11	81284294	81284295	chr11:81284295:T:C	rs58372353	T	C	T	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr11	81443267	81443268	chr11:81443268:T:C	rs11232675	T	C	T	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr11	81513243	81513244	chr11:81513244:G:C	rs1945654	G	C	C	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr11	81744396	81744397	chr11:81744397:G:A	rs72946223	G	A	g	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr11	81963193	81963194	chr11:81963194:C:T	rs146858764	C	T	C	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr11	82031790	82031791	chr11:82031791:T:A	rs886380846	T	A	T	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr11	82440053	82440054	chr11:82440054:G:A	rs79001486	G	A	G	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr11	82701059	82701060	chr11:82701060:A:C	rs11820464	A	C	A	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr11	82930114	82930115	chr11:82930115:A:C	chr11:82930115:A:C	A	C	A	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr11	82930114	82930115	chr11:82930115:A:G	rs2170009	A	G	A	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr11	83116027	83116028	chr11:83116028:C:T	rs536739909	C	T	C	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr11	83193237	83193238	chr11:83193238:G:A	chr11:83193238:G:A	G	A	G	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr11	83303588	83303589	chr11:83303589:C:T	rs629578	C	T	C	Hoxd9.mouse_homeodomain_1	2	1	+	7.212456609225008	0.7250161516013711	GCCATAAAG
chr11	83495181	83495182	chr11:83495182:G:T	rs11606908	G	T	G	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr11	83581812	83581813	chr11:83581813:T:C	rs684110	T	C	C	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr11	83629781	83629782	chr11:83629782:C:T	rs9734327	C	T	T	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr11	83820602	83820603	chr11:83820603:A:G	rs1516622	A	G	G	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr11	83871587	83871588	chr11:83871588:T:C	rs1540097	T	C	C	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr11	84801039	84801040	chr11:84801040:C:A	rs147937665	C	A	C	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr11	84871367	84871368	chr11:84871368:G:A	rs61897910	G	A	G	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr11	85673490	85673491	chr11:85673491:A:C	rs750452291	A	C	A	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr11	85675752	85675753	chr11:85675753:T:A	rs290182	T	A	T	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr11	85956044	85956045	chr11:85956045:T:G	rs41381550	T	G	T	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr11	86261435	86261436	chr11:86261436:C:T	rs10792843	C	T	C	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr11	86481170	86481171	chr11:86481171:A:G	rs116697544	A	G	A	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr11	86583061	86583062	chr11:86583062:C:T	rs10898504	C	T	C	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr11	86591724	86591725	chr11:86591725:T:C	rs7945260	T	C	C	Hoxd9.mouse_homeodomain_1	3	1	-	8.027213970992095	6.693135371129603	CACATAAAA
chr11	86621314	86621315	chr11:86621315:C:T	rs999472	C	T	C	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr11	86623021	86623022	chr11:86623022:T:C	rs1938929	T	C	T	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr11	86718150	86718151	chr11:86718151:G:A	rs118186808	G	A	G	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr11	86755466	86755467	chr11:86755467:G:T	rs76926018	G	T	G	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr11	86773537	86773538	chr11:86773538:C:T	rs4269941	C	T	C	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr11	86812385	86812386	chr11:86812386:G:A	rs55784956	G	A	G	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr11	87021128	87021129	chr11:87021129:G:A	rs17159946	G	A	G	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr11	87124331	87124332	chr11:87124332:A:G	rs2512344	A	G	A	Hoxd9.mouse_homeodomain_1	8	1	+	8.099252595576761	6.632925487091506	GCCATTAAA
chr11	87141526	87141527	chr11:87141527:T:G	rs499388	T	G	G	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr11	87141550	87141551	chr11:87141551:G:A	rs688542	G	A	A	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr11	87285982	87285983	chr11:87285983:C:T	rs7118674	C	T	C	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr11	87307576	87307577	chr11:87307577:G:A	rs116379279	G	A	G	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr11	87384274	87384275	chr11:87384275:G:A	rs4414246	G	A	A	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr11	87384277	87384278	chr11:87384278:T:G	rs7125169	T	G	T	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr11	87430113	87430114	chr11:87430114:A:C	rs11235140	A	C	C	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr11	87444987	87444988	chr11:87444988:C:T	rs7121872	C	T	C	Hoxd9.mouse_homeodomain_1	2	1	+	7.716978748812629	1.2295382911889927	GACATAAAA
chr11	87560036	87560037	chr11:87560037:T:C	rs4335573	T	C	C	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr11	87661557	87661558	chr11:87661558:A:C	rs900550950	A	C	A	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr11	87739473	87739474	chr11:87739474:G:A	rs115930199	G	A	G	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr11	88069539	88069540	chr11:88069540:T:C	rs3133232	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.716978748812629	6.382900148950135	GACATAAAA
chr11	88232097	88232098	chr11:88232098:G:A	rs74401884	G	A	G	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr11	88697366	88697367	chr11:88697367:C:T	rs1109101	C	T	C	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr11	89120238	89120239	chr11:89120239:C:T	rs34066282	C	T	C	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr11	89380892	89380893	chr11:89380893:G:A	rs188824	G	A	G	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr11	89380902	89380903	chr11:89380903:A:G	rs115015264	A	G	A	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr11	90029103	90029104	chr11:90029104:A:C	rs200341499	A	C	.	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr11	90121654	90121655	chr11:90121655:C:T	rs10765242	C	T	.	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr11	90204857	90204858	chr11:90204858:C:T	rs10765273	C	T	T	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr11	90699668	90699669	chr11:90699669:G:T	rs1792609	G	T	G	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr11	91136747	91136748	chr11:91136748:G:C	rs34915398	G	C	G	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr11	91404131	91404132	chr11:91404132:A:T	rs545114759	A	T	A	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr11	92423344	92423345	chr11:92423345:A:G	rs17514109	A	G	G	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr11	92424984	92424985	chr11:92424985:A:T	rs601451	A	T	A	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr11	92501529	92501530	chr11:92501530:G:A	rs896658567	G	A	G	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr11	93000867	93000868	chr11:93000868:C:G	rs568755696	C	G	C	Hoxd9.mouse_homeodomain_1	1	1	+	8.678783717710262	2.2692504889278973	GCCATAAAA
chr11	93024506	93024507	chr11:93024507:C:A	rs145505184	C	A	C	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr11	93220305	93220306	chr11:93220306:A:C	chr11:93220306:A:C	A	C	A	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr11	93504421	93504422	chr11:93504422:T:A	rs78320896	T	A	T	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr11	93560613	93560614	chr11:93560614:A:G	rs2895473	A	G	G	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr11	93728234	93728235	chr11:93728235:G:A	rs2509840	G	A	G	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr11	93743555	93743556	chr11:93743556:G:A	rs117849353	G	A	G	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr11	93837837	93837838	chr11:93837838:C:G	rs10765635	C	G	C	Hoxd9.mouse_homeodomain_1	2	1	+	8.98901893988973	5.5210272824374	CCCATAAAA
chr11	93948369	93948370	chr11:93948370:G:A	rs12789693	G	A	G	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr11	94033772	94033773	chr11:94033773:T:G	rs1401183	T	G	G	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr11	94152051	94152052	chr11:94152052:G:A	rs113875569	G	A	G	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr11	94405642	94405643	chr11:94405643:A:G	rs540256302	A	G	A	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr11	94507767	94507768	chr11:94507768:C:T	rs7937667	C	T	C	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr11	94603336	94603337	chr11:94603337:G:A	rs74717621	G	A	G	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr11	94652860	94652861	chr11:94652861:T:G	rs7114222	T	G	G	Hoxd9.mouse_homeodomain_1	4	1	+	7.9772278588234515	1.1354094114928457	GCAATAAAA
chr11	94657015	94657016	chr11:94657016:G:A	rs115902819	G	A	G	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr11	94800206	94800207	chr11:94800207:C:T	rs2303960	C	T	C	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr11	94835584	94835585	chr11:94835585:T:G	rs4753153	T	G	G	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr11	94854226	94854227	chr11:94854227:A:G	rs333025	A	G	A	Hoxd9.mouse_homeodomain_1	7	1	+	7.241935125048919	0.5381091784571871	CCCATACAA
chr11	94910844	94910845	chr11:94910845:A:G	rs572506	A	G	A	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr11	95045370	95045371	chr11:95045371:C:A	rs11021025	C	A	C	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr11	95267688	95267689	chr11:95267689:G:A	rs7926661	G	A	G	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr11	95308024	95308025	chr11:95308025:C:A	rs59694881	C	A	C	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr11	95652448	95652449	chr11:95652449:T:C	rs1262220	T	C	T	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr11	95715762	95715763	chr11:95715763:G:A	rs1527449	G	A	g	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr11	95716363	95716364	chr11:95716364:T:A	rs10831412	T	A	T	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr11	95814402	95814403	chr11:95814403:C:T	rs3016210	C	T	C	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr11	95904706	95904707	chr11:95904707:A:G	rs553990	A	G	G	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr11	96012023	96012024	chr11:96012024:G:T	rs10765782	G	T	T	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr11	96015698	96015699	chr11:96015699:G:T	rs4753185	G	T	G	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr11	96033430	96033431	chr11:96033431:C:T	rs608885	C	T	T	Hoxd9.mouse_homeodomain_1	2	1	+	7.212456609225008	0.7250161516013711	GCCATAAAG
chr11	96079908	96079909	chr11:96079909:C:G	rs12364044	C	G	G	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr11	96173528	96173529	chr11:96173529:G:A	rs140736690	G	A	G	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr11	96257973	96257974	chr11:96257974:A:C	rs10831503	A	C	A	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr11	96259881	96259882	chr11:96259882:C:T	rs580357	C	T	C	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr11	96328913	96328914	chr11:96328914:A:G	rs61268846	A	G	A	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr11	96728050	96728051	chr11:96728051:T:A	rs11213633	T	A	T	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr11	97638726	97638727	chr11:97638727:A:G	rs75062050	A	G	A	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr11	98107925	98107926	chr11:98107926:C:T	rs2508553	C	T	C	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr11	98208123	98208124	chr11:98208124:C:G	rs11214377	C	G	G	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr11	98208134	98208135	chr11:98208135:G:T	rs75382502	G	T	G	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr11	98521879	98521880	chr11:98521880:A:G	rs7942573	A	G	A	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr11	98573661	98573662	chr11:98573662:G:A	rs12420145	G	A	G	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr11	98740282	98740283	chr11:98740283:T:C	rs73539062	T	C	T	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr11	99016221	99016222	chr11:99016222:T:C	rs1291722086	T	C	T	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr11	99537684	99537685	chr11:99537685:T:C	rs10893481	T	C	t	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr11	99767984	99767985	chr11:99767985:T:C	rs80141677	T	C	T	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr11	99778522	99778523	chr11:99778523:C:T	rs1145377	C	T	C	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr11	100013252	100013253	chr11:100013253:T:A	rs770574	T	A	A	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr11	100316147	100316148	chr11:100316148:A:C	rs1216170	A	C	a	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr11	100445887	100445888	chr11:100445888:G:C	rs187064364	G	C	G	Hoxd9.mouse_homeodomain_1	0	1	-	8.287463081002919	7.9772278588234515	CCAATAAAA
chr11	100448540	100448541	chr11:100448541:C:A	rs4589259	C	A	A	Hoxd9.mouse_homeodomain_1	2	1	+	8.099252595576761	7.39769673668995	GCCATTAAA
chr11	100685126	100685127	chr11:100685127:C:T	rs7938601	C	T	T	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr11	100731598	100731599	chr11:100731599:A:T	rs1216748	A	T	A	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr11	100762041	100762042	chr11:100762042:A:G	rs17095407	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	7.716978748812629	6.382900148950135	GACATAAAA
chr11	100776204	100776205	chr11:100776205:C:T	rs507695	C	T	C	Hoxd9.mouse_homeodomain_1	1	1	+	8.287463081002919	6.972661166669912	CCAATAAAA
chr11	100799364	100799365	chr11:100799365:C:T	rs11224459	C	T	c	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr11	100948676	100948677	chr11:100948677:T:C	rs75461538	T	C	T	Hoxd9.mouse_homeodomain_1	6	1	-	7.889898683853121	1.18607273726139	ACCATAAAA
chr11	101128509	101128510	chr11:101128510:C:T	rs36055552	C	T	C	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr11	101128513	101128514	chr11:101128514:G:A	rs11571145	G	A	G	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr11	101128521	101128522	chr11:101128522:T:C	rs201378964	T	C	t	Hoxd9.mouse_homeodomain_1	7	1	-	7.522691831404475	0.8188658848127437	CCCATAAAG
chr11	101430359	101430360	chr11:101430360:A:G	rs75439174	A	G	A	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr11	101510185	101510186	chr11:101510186:C:A	rs10750606	C	A	A	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr11	101528778	101528779	chr11:101528779:T:C	rs3924457	T	C	C	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr11	101619122	101619123	chr11:101619123:T:A	rs2513191	T	A	A	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr11	102118986	102118987	chr11:102118987:G:A	rs11225132	G	A	G	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr11	102215994	102215995	chr11:102215995:T:C	rs17689912	T	C	T	Hoxd9.mouse_homeodomain_1	4	1	+	7.241935125048919	4.5868884801863405	CCCATACAA
chr11	102269197	102269198	chr11:102269198:C:A	rs77760245	C	A	C	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr11	102294619	102294620	chr11:102294620:G:A	rs17763887	G	A	G	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr11	102451878	102451879	chr11:102451879:C:A	rs80115586	C	A	C	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr11	102493787	102493788	chr11:102493788:C:T	rs668660	C	T	C	Hoxd9.mouse_homeodomain_1	3	1	-	7.075409217893736	8.409487817756228	CCCGTTAAA
chr11	102622537	102622538	chr11:102622538:G:A	rs11225344	G	A	G	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr11	102666487	102666488	chr11:102666488:C:T	rs190739550	C	T	C	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr11	102666490	102666491	chr11:102666491:C:T	rs1298374	C	T	T	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr11	102666504	102666505	chr11:102666505:C:A	rs539291898	C	A	C	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr11	102725392	102725393	chr11:102725393:G:T	chr11:102725393:G:T	G	T	G	Hoxd9.mouse_homeodomain_1	2	1	-	7.241935125048919	6.540379266162109	CCCATACAA
chr11	102964845	102964846	chr11:102964846:G:A	rs10791603	G	A	A	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr11	103013476	103013477	chr11:103013477:C:T	rs113080910	C	T	C	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr11	103092541	103092542	chr11:103092542:G:A	chr11:103092542:G:A	G	A	G	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr11	103491109	103491110	chr11:103491110:T:C	rs73595422	T	C	T	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr11	103529359	103529360	chr11:103529360:A:G	rs4754957	A	G	G	Hoxd9.mouse_homeodomain_1	3	1	+	7.091711387329735	5.757632787467242	CCCATCAAA
chr11	103582037	103582038	chr11:103582038:T:C	rs11225880	T	C	C	Hoxd9.mouse_homeodomain_1	0	1	-	7.889898683853121	8.678783717710262	ACCATAAAA
chr11	103582038	103582039	chr11:103582039:C:G	rs12797748	C	G	C	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr11	103619612	103619613	chr11:103619613:C:T	rs114888379	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	+	8.027213970992095	6.132666665683155	CACATAAAA
chr11	103728988	103728989	chr11:103728989:A:T	rs10502016	A	T	A	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr11	103955594	103955595	chr11:103955595:T:C	rs6591062	T	C	C	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr11	104051257	104051258	chr11:104051258:C:T	rs61892152	C	T	C	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr11	104196724	104196725	chr11:104196725:C:A	rs115454959	C	A	A	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr11	104305073	104305074	chr11:104305074:T:C	rs4755020	T	C	T	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr11	104452866	104452867	chr11:104452867:A:G	rs1487712	A	G	A	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr11	104564061	104564062	chr11:104564062:C:T	rs78278079	C	T	C	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr11	104859671	104859672	chr11:104859672:A:G	rs78308455	A	G	A	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr11	104859693	104859694	chr11:104859694:G:C	rs116908560	G	C	G	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr11	104917333	104917334	chr11:104917334:C:G	rs520173	C	G	c	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr11	104918493	104918494	chr11:104918494:A:G	rs488928	A	G	a	Hoxd9.mouse_homeodomain_1	8	1	+	8.027213970992095	6.560886862506841	CACATAAAA
chr11	104923477	104923478	chr11:104923478:G:A	rs558319	G	A	g	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr11	104923487	104923488	chr11:104923488:G:C	rs558281	G	C	g	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr11	104997933	104997934	chr11:104997934:A:T	rs545744	A	T	.	Hoxd9.mouse_homeodomain_1	6	1	+	7.889898683853121	5.000482913822536	ACCATAAAA
chr11	105110873	105110874	chr11:105110874:C:T	rs2062807	C	T	c	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr11	105110891	105110892	chr11:105110892:T:C	rs114742224	T	C	t	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr11	105152316	105152317	chr11:105152317:T:A	rs11226633	T	A	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.1462160923678635	5.142734955559218	GCCATAAAC
chr11	105241363	105241364	chr11:105241364:T:C	rs75461085	T	C	T	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr11	105334455	105334456	chr11:105334456:A:G	rs149816694	A	G	A	Hoxd9.mouse_homeodomain_1	4	1	-	7.45645131454733	4.801404669684752	CCCATAAAC
chr11	105444099	105444100	chr11:105444100:A:G	rs1945977	A	G	G	Hoxd9.mouse_homeodomain_1	6	1	+	7.45645131454733	0.752625367955599	CCCATAAAC
chr11	105611714	105611715	chr11:105611715:C:T	rs118064766	C	T	C	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr11	105615124	105615125	chr11:105615125:G:A	rs77698121	G	A	G	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr11	105622166	105622167	chr11:105622167:A:T	rs72991703	A	T	A	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr11	105695875	105695876	chr11:105695876:A:C	rs1822993	A	C	C	Hoxd9.mouse_homeodomain_1	5	1	+	8.027213970992095	6.1299064184321015	CACATAAAA
chr11	105717343	105717344	chr11:105717344:A:G	rs12808612	A	G	A	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr11	105943194	105943195	chr11:105943195:T:C	rs893918562	T	C	T	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr11	105949373	105949374	chr11:105949374:C:T	rs548814	C	T	T	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr11	106047864	106047865	chr11:106047865:T:A	rs10791779	T	A	T	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr11	106079076	106079077	chr11:106079077:G:A	rs17393316	G	A	g	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr11	106238202	106238203	chr11:106238203:C:T	rs77732304	C	T	C	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr11	106248592	106248593	chr11:106248593:G:A	rs12289033	G	A	G	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr11	106447787	106447788	chr11:106447788:A:G	rs907647	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	7.9772278588234515	6.643149258960959	GCAATAAAA
chr11	106503823	106503824	chr11:106503824:A:G	rs7482593	A	G	A	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr11	106670423	106670424	chr11:106670424:G:T	rs7104111	G	T	T	Hoxd9.mouse_homeodomain_1	2	1	-	8.027213970992095	7.325658112105286	CACATAAAA
chr11	107266385	107266386	chr11:107266386:C:T	rs7931436	C	T	T	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr11	107496009	107496010	chr11:107496010:A:G	rs117482997	A	G	A	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr11	107780368	107780369	chr11:107780369:G:A	rs621334	G	A	G	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr11	108637756	108637757	chr11:108637757:G:A	rs78474882	G	A	G	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr11	108902017	108902018	chr11:108902018:G:T	rs61912810	G	T	G	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr11	109853218	109853219	chr11:109853219:T:C	rs186537555	T	C	T	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr11	109857040	109857041	chr11:109857041:G:A	rs554442	G	A	A	Hoxd9.mouse_homeodomain_1	8	1	-	7.1462160923678635	5.746270592944195	GCCATAAAC
chr11	110076782	110076783	chr11:110076783:A:G	rs12270706	A	G	G	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr11	110124068	110124069	chr11:110124069:G:C	rs644996	G	C	C	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr11	110146303	110146304	chr11:110146304:C:T	rs648594	C	T	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.075409217893736	8.409487817756228	CCCGTTAAA
chr11	110186636	110186637	chr11:110186637:C:T	rs11213298	C	T	C	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr11	110376120	110376121	chr11:110376121:T:A	rs2724417	T	A	T	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr11	110513145	110513146	chr11:110513146:C:T	rs117979486	C	T	C	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr11	110513164	110513165	chr11:110513165:G:T	rs7942728	G	T	G	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr11	110513165	110513166	chr11:110513166:C:T	rs752115132	C	T	C	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr11	110735596	110735597	chr11:110735597:T:A	rs11213569	T	A	T	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr11	110759051	110759052	chr11:110759052:A:G	rs1506499	A	G	G	Hoxd9.mouse_homeodomain_1	4	1	-	8.98901893988973	6.333972295027152	CCCATAAAA
chr11	110963257	110963258	chr11:110963258:G:A	rs11213677	G	A	A	Hoxd9.mouse_homeodomain_1	2	1	-	8.409487817756228	1.922047360132591	CCCATTAAA
chr11	111045845	111045846	chr11:111045846:A:C	rs17534768	A	C	A	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr11	111179801	111179802	chr11:111179802:T:C	rs59614433	T	C	T	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr11	111404407	111404408	chr11:111404408:G:A	rs4938534	G	A	A	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr11	111595036	111595037	chr11:111595037:G:C	rs484834	G	C	C	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr11	111612581	111612582	chr11:111612582:A:G	rs1784785	A	G	A	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr11	111727526	111727527	chr11:111727527:G:A	rs79762860	G	A	G	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr11	111759982	111759983	chr11:111759983:T:A	rs781839721	T	A	T	Hoxd9.mouse_homeodomain_1	4	1	+	7.091711387329735	0.2498929399991291	CCCATCAAA
chr11	111871029	111871030	chr11:111871030:G:A	chr11:111871030:G:A	G	A	G	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr11	112131720	112131721	chr11:112131721:A:T	rs191647727	A	T	A	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr11	112222644	112222645	chr11:112222645:G:A	rs2518347	G	A	g	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr11	112277056	112277057	chr11:112277057:G:A	rs7120010	G	A	G	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr11	112297264	112297265	chr11:112297265:A:G	rs114458860	A	G	A	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr11	112374793	112374794	chr11:112374794:C:T	rs146294308	C	T	C	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr11	112533458	112533459	chr11:112533459:G:A	rs116412921	G	A	G	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr11	112852900	112852901	chr11:112852901:A:G	rs11214400	A	G	A	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr11	112907694	112907695	chr11:112907695:T:C	rs1447480	T	C	C	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr11	113176856	113176857	chr11:113176857:A:G	rs150267779	A	G	A	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr11	113176860	113176861	chr11:113176861:G:A	rs11214531	G	A	A	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr11	113549251	113549252	chr11:113549252:A:G	rs10891571	A	G	A	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr11	113629790	113629791	chr11:113629791:G:A	rs7131623	G	A	A	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr11	113670532	113670533	chr11:113670533:A:G	rs2363550	A	G	G	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr11	113731127	113731128	chr11:113731128:G:T	rs7927569	G	T	G	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr11	114017759	114017760	chr11:114017760:A:G	rs137995504	A	G	A	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr11	114095050	114095051	chr11:114095051:G:A	rs900328867	G	A	G	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr11	114125828	114125829	chr11:114125829:C:A	rs77855459	C	A	C	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr11	114131371	114131372	chr11:114131372:A:G	rs73000982	A	G	A	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr11	114142921	114142922	chr11:114142922:A:C	rs190128371	A	C	A	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr11	114149991	114149992	chr11:114149992:C:T	rs11214879	C	T	C	Hoxd9.mouse_homeodomain_1	1	1	+	8.678783717710262	7.363981803377255	GCCATAAAA
chr11	114215239	114215240	chr11:114215240:A:G	rs552007	A	G	A	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr11	114532951	114532952	chr11:114532952:G:A	rs11215037	G	A	G	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr11	114847236	114847237	chr11:114847237:G:C	rs4936304	G	C	C	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr11	115071825	115071826	chr11:115071826:A:G	rs2507878	A	G	G	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr11	115335102	115335103	chr11:115335103:T:A	rs137866726	T	A	T	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr11	115623878	115623879	chr11:115623879:T:C	rs2155635	T	C	C	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr11	115625773	115625774	chr11:115625774:C:G	rs75779455	C	G	C	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr11	115906318	115906319	chr11:115906319:G:A	rs11215724	G	A	A	Hoxd9.mouse_homeodomain_1	1	1	-	7.091711387329735	5.776909472996728	CCCATCAAA
chr11	115918574	115918575	chr11:115918575:A:C	rs4936335	A	C	A	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr11	115931722	115931723	chr11:115931723:T:C	rs367164	T	C	C	Hoxd9.mouse_homeodomain_1	4	1	+	7.091711387329735	4.436664742467157	CCCATCAAA
chr11	115941452	115941453	chr11:115941453:A:G	rs1145180	A	G	G	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr11	115989968	115989969	chr11:115989969:T:A	rs6589521	T	A	T	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr11	116193930	116193931	chr11:116193931:G:T	rs540165871	G	T	G	Hoxd9.mouse_homeodomain_1	1	1	-	7.091711387329735	6.1299064184321015	CCCATCAAA
chr11	116193935	116193936	chr11:116193936:G:C	rs145885079	G	C	G	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr11	116266432	116266433	chr11:116266433:C:T	rs61897072	C	T	C	Hoxd9.mouse_homeodomain_1	1	1	+	7.241935125048919	5.927133210715912	CCCATACAA
chr11	116600326	116600327	chr11:116600327:G:A	rs11216037	G	A	g	Hoxd9.mouse_homeodomain_1	3	1	+	7.075409217893736	8.409487817756228	CCCGTTAAA
chr11	116645788	116645789	chr11:116645789:C:T	rs1789403	C	T	T	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr11	116702991	116702992	chr11:116702992:C:T	rs17119897	C	T	C	Hoxd9.mouse_homeodomain_1	8	1	-	7.212456609225008	8.678783717710262	GCCATAAAG
chr11	116791260	116791261	chr11:116791261:C:A	rs184621276	C	A	C	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr11	116791261	116791262	chr11:116791262:C:G	rs189405591	C	G	C	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr11	116793323	116793324	chr11:116793324:G:A	rs10750097	G	A	G	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr11	117012999	117013000	chr11:117013000:C:T	rs7110042	C	T	C	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr11	117467248	117467249	chr11:117467249:G:A	rs35585361	G	A	G	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr11	117652792	117652793	chr11:117652793:C:G	rs11216485	C	G	C	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr11	117708891	117708892	chr11:117708892:A:T	rs78696045	A	T	A	Hoxd9.mouse_homeodomain_1	8	1	+	8.409487817756228	5.47697469299016	CCCATTAAA
chr11	117720868	117720869	chr11:117720869:C:T	rs948106	C	T	C	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr11	117735015	117735016	chr11:117735016:G:C	rs61903855	G	C	G	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr11	117791422	117791423	chr11:117791423:G:A	rs12795949	G	A	G	Hoxd9.mouse_homeodomain_1	1	1	-	7.212456609225008	5.897654694892	GCCATAAAG
chr11	117838972	117838973	chr11:117838973:A:G	rs11216575	A	G	A	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr11	117840080	117840081	chr11:117840081:A:G	rs11216578	A	G	A	Hoxd9.mouse_homeodomain_1	7	1	+	8.409487817756228	1.7056618711644962	CCCATTAAA
chr11	117842133	117842134	chr11:117842134:G:C	rs17596129	G	C	G	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr11	117842140	117842141	chr11:117842141:G:A	rs1279508167	G	A	G	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr11	117851771	117851772	chr11:117851772:A:G	rs498314	A	G	G	Hoxd9.mouse_homeodomain_1	4	1	-	7.212456609225008	4.557409964362429	GCCATAAAG
chr11	117851785	117851786	chr11:117851786:T:C	rs4525270	T	C	T	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr11	117961093	117961094	chr11:117961094:A:G	rs3020913	A	G	A	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr11	117970111	117970112	chr11:117970112:A:G	rs10750119	A	G	G	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr11	118022802	118022803	chr11:118022803:G:T	rs73013721	G	T	T	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr11	118998828	118998829	chr11:118998829:G:A	rs11822103	G	A	G	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr11	119550575	119550576	chr11:119550576:T:G	rs11217313	T	G	T	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr11	119730786	119730787	chr11:119730787:G:C	rs4938718	G	C	G	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr11	119897344	119897345	chr11:119897345:C:A	rs11217556	C	A	C	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr11	119906901	119906902	chr11:119906902:A:G	rs509809	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	7.9772278588234515	6.643149258960959	GCAATAAAA
chr11	119907834	119907835	chr11:119907835:G:T	rs4938738	G	T	G	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr11	119936207	119936208	chr11:119936208:C:T	rs895650	C	T	T	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr11	120091569	120091570	chr11:120091570:C:G	rs683743	C	G	G	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr11	120129046	120129047	chr11:120129047:C:T	rs470941	C	T	C	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr11	120169411	120169412	chr11:120169412:G:C	rs78077322	G	C	G	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr11	120187976	120187977	chr11:120187977:T:G	rs12278345	T	G	G	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr11	120218480	120218481	chr11:120218481:G:A	rs138738215	G	A	G	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr11	120244740	120244741	chr11:120244741:G:A	rs11217773	G	A	G	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr11	120244768	120244769	chr11:120244769:A:T	rs114922167	A	T	A	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr11	120336253	120336254	chr11:120336254:T:C	chr11:120336254:T:C	T	C	A	Hoxd9.mouse_homeodomain_1	4	1	+	7.212456609225008	4.557409964362429	GCCATAAAG
chr11	120336265	120336266	chr11:120336266:G:A	rs532885157	G	A	G	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr11	120338676	120338677	chr11:120338677:G:A	rs4938800	G	A	G	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr11	120344592	120344593	chr11:120344593:A:G	rs138882584	A	G	A	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr11	120431745	120431746	chr11:120431746:C:T	rs201129351	C	T	T	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr11	120431746	120431747	chr11:120431747:G:A	rs117092333	G	A	G	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr11	120564312	120564313	chr11:120564313:G:A	rs7104127	G	A	G	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr11	120564314	120564315	chr11:120564315:A:C	rs7103821	A	C	C	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr11	120676759	120676760	chr11:120676760:T:C	rs528205032	T	C	T	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr11	120688360	120688361	chr11:120688361:A:G	rs10892616	A	G	A	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr11	120688377	120688378	chr11:120688378:G:A	rs1418385613	G	A	G	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr11	120751669	120751670	chr11:120751670:A:G	rs7952159	A	G	G	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr11	120751675	120751676	chr11:120751676:C:T	rs12804621	C	T	C	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr11	120824216	120824217	chr11:120824217:A:G	rs79446094	A	G	A	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr11	120824256	120824257	chr11:120824257:G:A	rs111728839	G	A	G	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr11	120838298	120838299	chr11:120838299:G:A	rs11218022	G	A	A	Hoxd9.mouse_homeodomain_1	0	1	+	7.716978748812629	6.928093714955487	GACATAAAA
chr11	120938488	120938489	chr11:120938489:G:C	rs580711	G	C	C	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr11	120979475	120979476	chr11:120979476:C:G	rs477389	C	G	G	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr11	121422679	121422680	chr11:121422680:C:T	rs118019109	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	+	7.075409217893736	5.180861912584794	CCCGTTAAA
chr11	121459377	121459378	chr11:121459378:A:G	rs3862606	A	G	A	Hoxd9.mouse_homeodomain_1	5	1	+	7.9772278588234515	1.603038140576896	GCAATAAAA
chr11	121515181	121515182	chr11:121515182:G:A	rs61905187	G	A	G	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr11	121569521	121569522	chr11:121569522:G:A	rs7118902	G	A	g	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr11	121697508	121697509	chr11:121697509:T:C	rs77516415	T	C	T	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr11	122307092	122307093	chr11:122307093:C:A	rs2510647	C	A	A	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr11	122320301	122320302	chr11:122320302:A:G	rs73591813	A	G	A	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr11	122418407	122418408	chr11:122418408:G:A	rs472295	G	A	G	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr11	122714107	122714108	chr11:122714108:G:A	rs55829392	G	A	G	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr11	122734900	122734901	chr11:122734901:G:C	rs7105044	G	C	G	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr11	122763369	122763370	chr11:122763370:G:A	rs11218798	G	A	G	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr11	122931780	122931781	chr11:122931781:A:C	rs7119411	A	C	C	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr11	123105206	123105207	chr11:123105207:T:C	rs11218985	T	C	t	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr11	123173274	123173275	chr11:123173275:T:C	rs189783172	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.678783717710262	7.34470511784777	GCCATAAAA
chr11	123196946	123196947	chr11:123196947:G:T	rs2155572	G	T	-	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr11	123202816	123202817	chr11:123202817:C:T	rs11824555	C	T	C	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr11	123221972	123221973	chr11:123221973:G:A	rs67164150	G	A	G	Hoxd9.mouse_homeodomain_1	2	1	-	8.027213970992095	1.5397735133684596	CACATAAAA
chr11	123230586	123230587	chr11:123230587:A:G	rs58348134	A	G	A	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr11	123259381	123259382	chr11:123259382:C:T	rs73019854	C	T	C	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr11	123273141	123273142	chr11:123273142:C:A	rs4936797	C	A	C	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr11	123353614	123353615	chr11:123353615:C:T	rs184334058	C	T	C	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr11	123354912	123354913	chr11:123354913:G:A	rs143066711	G	A	G	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr11	123524747	123524748	chr11:123524748:G:C	rs4936821	G	C	G	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr11	124207652	124207653	chr11:124207653:G:A	rs2846229	G	A	g	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr11	124209652	124209653	chr11:124209653:G:A	rs10790649	G	A	g	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr11	124209680	124209681	chr11:124209681:A:C	rs10790650	A	C	N	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr11	124277704	124277705	chr11:124277705:A:G	rs7941270	A	G	.	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr11	124294994	124294995	chr11:124294995:A:T	rs2466625	A	T	.	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr11	124302668	124302669	chr11:124302669:C:T	rs10893205	C	T	.	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr11	124584012	124584013	chr11:124584013:T:G	rs4622281	T	G	G	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr11	124586308	124586309	chr11:124586309:C:T	rs114182339	C	T	-	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr11	124884243	124884244	chr11:124884244:A:G	rs75208982	A	G	A	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr11	124927729	124927730	chr11:124927730:A:C	rs76979538	A	C	A	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr11	124950599	124950600	chr11:124950600:A:G	rs7121708	A	G	A	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr11	124950600	124950601	chr11:124950601:T:A	rs7107421	T	A	A	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr11	124950628	124950629	chr11:124950629:T:C	rs12791271	T	C	T	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr11	124950640	124950641	chr11:124950641:C:T	rs111725479	C	T	C	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr11	125068641	125068642	chr11:125068642:G:A	rs36062969	G	A	G	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr11	125260171	125260172	chr11:125260172:T:C	rs11219999	T	C	C	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr11	125306540	125306541	chr11:125306541:T:C	rs10893365	T	C	C	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr11	125388408	125388409	chr11:125388409:C:T	rs73027824	C	T	C	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr11	125388410	125388411	chr11:125388411:G:A	rs11220044	G	A	G	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr11	125421724	125421725	chr11:125421725:A:G	rs608529	A	G	A	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr11	125421748	125421749	chr11:125421749:A:G	rs608501	A	G	G	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr11	125903376	125903377	chr11:125903377:G:A	rs571079	G	A	A	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr11	126034827	126034828	chr11:126034828:A:G	chr11:126034828:A:G	A	G	A	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr11	126135962	126135963	chr11:126135963:G:A	rs657225	G	A	G	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr11	126141691	126141692	chr11:126141692:G:T	rs56179807	G	T	G	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr11	126150214	126150215	chr11:126150215:A:G	rs595004	A	G	a	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr11	126151381	126151382	chr11:126151382:T:C	rs75447372	T	C	T	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr11	126151404	126151405	chr11:126151405:C:T	rs9804651	C	T	C	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr11	126197540	126197541	chr11:126197541:A:G	rs77023621	A	G	a	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr11	126283974	126283975	chr11:126283975:A:G	rs3017014	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.678783717710262	7.34470511784777	GCCATAAAA
chr11	126283979	126283980	chr11:126283980:A:G	rs8177353	A	G	A	Hoxd9.mouse_homeodomain_1	8	1	+	8.678783717710262	7.212456609225008	GCCATAAAA
chr11	126346518	126346519	chr11:126346519:G:A	rs113997985	G	A	A	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr11	126525370	126525371	chr11:126525371:T:G	chr11:126525371:T:G	T	G	T	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr11	126549513	126549514	chr11:126549514:C:G	rs112780491	C	G	C	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr11	126629434	126629435	chr11:126629435:A:C	rs531009	A	C	C	Hoxd9.mouse_homeodomain_1	4	1	-	8.98901893988973	2.147200492559124	CCCATAAAA
chr11	126629457	126629458	chr11:126629458:C:A	rs113904001	C	A	C	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr11	126660706	126660707	chr11:126660707:T:C	rs7124171	T	C	T	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr11	126956443	126956444	chr11:126956444:T:C	rs142770940	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.099252595576761	6.765173995714267	GCCATTAAA
chr11	127485474	127485475	chr11:127485475:G:A	rs10790886	G	A	G	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr11	127485485	127485486	chr11:127485486:G:A	rs10790887	G	A	G	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr11	127926454	127926455	chr11:127926455:C:A	rs4937277	C	A	A	Hoxd9.mouse_homeodomain_1	2	1	+	7.091711387329735	6.390155528442924	CCCATCAAA
chr11	128093226	128093227	chr11:128093227:C:T	rs73023166	C	T	C	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr11	128251702	128251703	chr11:128251703:A:G	rs554631	A	G	A	Hoxd9.mouse_homeodomain_1	8	1	+	7.241935125048919	5.775608016563663	CCCATACAA
chr11	128273078	128273079	chr11:128273079:A:G	rs140825108	A	G	A	Hoxd9.mouse_homeodomain_1	5	1	+	8.027213970992095	1.6530242527455408	CACATAAAA
chr11	128342150	128342151	chr11:128342151:C:T	rs60221653	C	T	C	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr11	128425342	128425343	chr11:128425343:G:A	rs115676915	G	A	G	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr11	128508870	128508871	chr11:128508871:T:G	rs35163142	T	G	T	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr11	128661065	128661066	chr11:128661066:A:G	rs612789	A	G	A	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr11	128701184	128701185	chr11:128701185:T:C	rs607670	T	C	T	Hoxd9.mouse_homeodomain_1	4	1	+	7.716978748812629	5.061932103950051	GACATAAAA
chr11	128802685	128802686	chr11:128802686:A:C	rs687326	A	C	C	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr11	128831155	128831156	chr11:128831156:A:T	rs77349691	A	T	A	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr11	128904872	128904873	chr11:128904873:A:G	rs77857138	A	G	G	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr11	129252662	129252663	chr11:129252663:A:G	rs7941048	A	G	A	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr11	129267709	129267710	chr11:129267710:C:G	rs192628177	C	G	C	Hoxd9.mouse_homeodomain_1	2	1	+	7.212456609225008	3.7444649517726774	GCCATAAAG
chr11	129611140	129611141	chr11:129611141:T:C	rs141125147	T	C	T	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr11	129619274	129619275	chr11:129619275:T:C	rs4936079	T	C	C	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr11	129758251	129758252	chr11:129758252:G:A	rs138371795	G	A	G	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr11	129788202	129788203	chr11:129788203:C:T	rs74946047	C	T	C	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr11	129789234	129789235	chr11:129789235:C:T	rs4936085	C	T	C	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr11	130023053	130023054	chr11:130023054:T:G	rs7948316	T	G	t	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr11	130026470	130026471	chr11:130026471:C:T	rs1286963956	C	T	-	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr11	130163533	130163534	chr11:130163534:G:A	rs540558208	G	A	G	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr11	130207127	130207128	chr11:130207128:C:T	rs7123119	C	T	T	Hoxd9.mouse_homeodomain_1	0	1	+	6.943160709270972	5.048613403962031	CCCATTAAG
chr11	130316165	130316166	chr11:130316166:C:T	rs371602792	C	T	C	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr11	130384285	130384286	chr11:130384286:C:T	rs77110613	C	T	T	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr11	130384311	130384312	chr11:130384312:A:G	rs141687092	A	G	A	Hoxd9.mouse_homeodomain_1	7	1	+	8.099252595576761	1.3954266489850298	GCCATTAAA
chr11	130384331	130384332	chr11:130384332:G:C	rs116174767	G	C	G	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr11	130435171	130435172	chr11:130435172:G:C	rs184872267	G	C	G	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr11	130443329	130443330	chr11:130443330:T:A	rs7924576	T	A	T	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr11	130450301	130450302	chr11:130450302:C:T	rs115438088	C	T	C	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr11	130450303	130450304	chr11:130450304:G:A	rs12419864	G	A	G	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr11	130607320	130607321	chr11:130607321:G:A	rs559274701	G	A	G	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr11	130613801	130613802	chr11:130613802:T:A	rs4937545	T	A	A	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr11	130801949	130801950	chr11:130801950:C:T	rs55656225	C	T	C	Hoxd9.mouse_homeodomain_1	1	1	+	7.522691831404475	6.207889917071467	CCCATAAAG
chr11	130883219	130883220	chr11:130883220:T:C	rs11222374	T	C	T	Hoxd9.mouse_homeodomain_1	4	1	+	7.716978748812629	5.061932103950051	GACATAAAA
chr11	130892750	130892751	chr11:130892751:C:T	rs11222378	C	T	C	Hoxd9.mouse_homeodomain_1	1	1	+	8.287463081002919	6.972661166669912	CCAATAAAA
chr11	130911579	130911580	chr11:130911580:C:G	rs3751038	C	G	G	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr11	131000869	131000870	chr11:131000870:A:G	rs1820353	A	G	G	Hoxd9.mouse_homeodomain_1	4	1	-	8.027213970992095	5.372167326129518	CACATAAAA
chr11	131041653	131041654	chr11:131041654:G:T	rs185703348	G	T	G	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr11	131257248	131257249	chr11:131257249:C:G	rs2511770	C	G	G	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr11	131307808	131307809	chr11:131307809:T:C	rs1793589	T	C	C	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr11	131307823	131307824	chr11:131307824:T:G	rs1793844	T	G	G	Hoxd9.mouse_homeodomain_1	5	1	-	8.678783717710262	6.781476165150267	GCCATAAAA
chr11	131307847	131307848	chr11:131307848:T:C	rs142207959	T	C	T	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr11	131748505	131748506	chr11:131748506:T:C	chr11:131748506:T:C	T	C	T	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr11	131771131	131771132	chr11:131771132:C:A	rs10750488	C	A	A	Hoxd9.mouse_homeodomain_1	2	1	+	8.678783717710262	7.9772278588234515	GCCATAAAA
chr11	131889215	131889216	chr11:131889216:C:T	rs76217927	C	T	C	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr11	131903255	131903256	chr11:131903256:T:C	rs77406024	T	C	T	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr11	131911693	131911694	chr11:131911694:C:G	rs60850004	C	G	G	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr11	131916787	131916788	chr11:131916788:C:T	rs75525188	C	T	C	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr11	131967131	131967132	chr11:131967132:G:A	rs35361897	G	A	G	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr11	131998271	131998272	chr11:131998272:G:A	rs756629	G	A	G	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr11	132055219	132055220	chr11:132055220:T:C	rs11222890	T	C	T	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr11	132075924	132075925	chr11:132075925:G:T	rs11222901	G	T	G	Hoxd9.mouse_homeodomain_1	0	1	-	8.287463081002919	7.188342824966311	CCAATAAAA
chr11	132099811	132099812	chr11:132099812:A:G	rs6590623	A	G	A	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr11	132134680	132134681	chr11:132134681:T:C	rs150122417	T	C	T	Hoxd9.mouse_homeodomain_1	7	1	-	8.678783717710262	1.9749577711185315	GCCATAAAA
chr11	132261893	132261894	chr11:132261894:G:C	rs753503	G	C	G	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr11	132830335	132830336	chr11:132830336:C:A	rs4491241	C	A	A	Hoxd9.mouse_homeodomain_1	1	1	+	7.522691831404475	6.560886862506841	CCCATAAAG
chr11	132850352	132850353	chr11:132850353:T:C	rs2659615	T	C	T	Hoxd9.mouse_homeodomain_1	4	1	+	8.409487817756228	5.7544411728936495	CCCATTAAA
chr11	132993786	132993787	chr11:132993787:T:C	rs7114353	T	C	T	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr11	132994283	132994284	chr11:132994284:T:C	rs9737546	T	C	T	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr11	133035473	133035474	chr11:133035474:A:G	rs4369418	A	G	G	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr11	133147043	133147044	chr11:133147044:C:A	rs1248184383	C	A	C	Hoxd9.mouse_homeodomain_1	2	1	+	7.091711387329735	6.390155528442924	CCCATCAAA
chr11	133426529	133426530	chr11:133426530:C:T	rs55784784	C	T	C	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr11	133500580	133500581	chr11:133500581:G:T	rs67204326	G	T	G	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr11	133519970	133519971	chr11:133519971:C:T	rs760523320	C	T	C	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr11	133723229	133723230	chr11:133723230:T:C	rs80060612	T	C	T	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr11	133754071	133754072	chr11:133754072:T:A	rs7106714	T	A	A	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr11	133796804	133796805	chr11:133796805:T:C	rs4073744	T	C	T	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr11	134004760	134004761	chr11:134004761:G:A	rs586802	G	A	G	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr11	134232945	134232946	chr11:134232946:C:T	rs118118115	C	T	C	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr11	134262439	134262440	chr11:134262440:G:C	rs73603086	G	C	G	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr11	134291205	134291206	chr11:134291206:G:A	rs1144227	G	A	G	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr11	134501336	134501337	chr11:134501337:A:G	rs79999058	A	G	A	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr11	134504216	134504217	chr11:134504217:G:A	rs12804946	G	A	G	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr11	134663879	134663880	chr11:134663880:C:T	rs76089077	C	T	C	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr11	134686727	134686728	chr11:134686728:T:C	rs3737493	T	C	T	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr11	134686750	134686751	chr11:134686751:C:T	rs74665778	C	T	C	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr11	134686760	134686761	chr11:134686761:C:T	rs1939721	C	T	T	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr11	134819329	134819330	chr11:134819330:G:A	rs34542693	G	A	G	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr11	134819349	134819350	chr11:134819350:G:A	rs115343355	G	A	G	Hoxd9.mouse_homeodomain_1	1	1	-	8.678783717710262	7.363981803377255	GCCATAAAA
chr11	134954134	134954135	chr11:134954135:C:A	rs11224109	C	A	C	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr11	135048283	135048284	chr11:135048284:T:C	rs59247183	T	C	-	Hoxd9.mouse_homeodomain_1	6	1	-	7.9772278588234515	1.2734019122317202	GCAATAAAA
chr12	185076	185077	chr12:185077:C:A	rs57052808	C	A	A	Hoxd9.mouse_homeodomain_1	2	1	+	7.716978748812629	7.0154228899258175	GACATAAAA
chr12	297125	297126	chr12:297126:G:A	rs2229351	G	A	g	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr12	522557	522558	chr12:522558:C:T	rs10774285	C	T	C	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr12	592256	592257	chr12:592257:A:C	rs11063771	A	C	C	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr12	608334	608335	chr12:608335:A:G	rs11063848	A	G	A	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr12	666908	666909	chr12:666909:C:T	rs11611269	C	T	C	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr12	780579	780580	chr12:780580:G:T	rs72647390	G	T	G	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr12	800564	800565	chr12:800565:A:G	rs12314329	A	G	A	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr12	914360	914361	chr12:914361:G:A	rs1025939478	G	A	G	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr12	963798	963799	chr12:963799:C:T	rs6489769	C	T	T	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr12	1096101	1096102	chr12:1096102:G:A	rs11061630	G	A	A	Hoxd9.mouse_homeodomain_1	0	1	-	8.027213970992095	6.132666665683155	CACATAAAA
chr12	1163004	1163005	chr12:1163005:G:A	rs2906110	G	A	g	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr12	1174144	1174145	chr12:1174145:G:C	rs73041065	G	C	G	Hoxd9.mouse_homeodomain_1	2	1	-	8.98901893988973	5.5210272824374	CCCATAAAA
chr12	1319186	1319187	chr12:1319187:C:T	rs7975854	C	T	T	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr12	1355476	1355477	chr12:1355477:A:G	rs114539125	A	G	A	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr12	1368093	1368094	chr12:1368094:A:G	rs76879893	A	G	A	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr12	1481966	1481967	chr12:1481967:C:A	rs79647186	C	A	C	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr12	1605749	1605750	chr12:1605750:G:C	rs74058785	G	C	G	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr12	1813028	1813029	chr12:1813029:A:C	rs4454778	A	C	A	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr12	2223628	2223629	chr12:2223629:A:T	rs1108221	A	T	A	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr12	2267940	2267941	chr12:2267941:G:A	rs142814747	G	A	G	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr12	2349783	2349784	chr12:2349784:G:A	rs73035417	G	A	G	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr12	2581262	2581263	chr12:2581263:C:G	rs116569987	C	G	C	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr12	2652359	2652360	chr12:2652360:G:A	rs73247415	G	A	A	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr12	2676948	2676949	chr12:2676949:C:G	rs12818148	C	G	C	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr12	3002987	3002988	chr12:3002988:C:T	rs61917967	C	T	C	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr12	3133066	3133067	chr12:3133067:T:A	rs12306464	T	A	T	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr12	3163440	3163441	chr12:3163441:A:G	rs10848816	A	G	A	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr12	3172029	3172030	chr12:3172030:G:C	rs11612038	G	C	G	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr12	3215098	3215099	chr12:3215099:A:G	rs10848823	A	G	G	Hoxd9.mouse_homeodomain_1	3	1	+	8.409487817756228	7.075409217893736	CCCATTAAA
chr12	3279258	3279259	chr12:3279259:T:C	rs541015	T	C	T	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr12	3616800	3616801	chr12:3616801:C:T	rs4766147	C	T	T	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr12	3698794	3698795	chr12:3698795:C:T	rs17836297	C	T	C	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr12	3988301	3988302	chr12:3988302:T:C	rs11062948	T	C	T	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr12	4048859	4048860	chr12:4048860:T:C	rs2532559	T	C	C	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr12	4306918	4306919	chr12:4306919:A:G	rs10505729	A	G	A	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr12	4308402	4308403	chr12:4308403:A:G	rs550709955	A	G	A	Hoxd9.mouse_homeodomain_1	6	1	+	8.027213970992095	1.3233880244003648	CACATAAAA
chr12	4378698	4378699	chr12:4378699:G:A	rs11063123	G	A	A	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr12	4417183	4417184	chr12:4417184:G:A	rs7131733	G	A	G	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr12	4417192	4417193	chr12:4417193:C:G	rs7132658	C	G	G	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr12	4591996	4591997	chr12:4591997:A:G	rs10492055	A	G	A	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr12	4605390	4605391	chr12:4605391:C:T	rs758532	C	T	C	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr12	4605399	4605400	chr12:4605400:C:T	rs118116239	C	T	C	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr12	4630615	4630616	chr12:4630616:A:G	rs2299834	A	G	G	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr12	4837814	4837815	chr12:4837815:T:C	rs10744663	T	C	C	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr12	4850458	4850459	chr12:4850459:A:T	rs12310734	A	T	A	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr12	5187359	5187360	chr12:5187360:C:A	rs1382840	C	A	C	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr12	5378084	5378085	chr12:5378085:C:T	rs145261109	C	T	C	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr12	5378191	5378192	chr12:5378192:T:G	rs940227713	T	G	T	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr12	5514753	5514754	chr12:5514754:T:C	rs77197762	T	C	T	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr12	5520623	5520624	chr12:5520624:T:A	rs79296729	T	A	T	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr12	5603311	5603312	chr12:5603312:A:G	rs4930739	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.287463081002919	6.953384481140425	CCAATAAAA
chr12	5664808	5664809	chr12:5664809:G:A	rs251779	G	A	G	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr12	5799036	5799037	chr12:5799037:C:T	rs10744694	C	T	T	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr12	5924794	5924795	chr12:5924795:A:G	rs12830347	A	G	G	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr12	6133073	6133074	chr12:6133074:G:A	rs10774395	G	A	G	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr12	6223143	6223144	chr12:6223144:G:C	rs3782717	G	C	G	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr12	6286931	6286932	chr12:6286932:C:A	rs73047755	C	A	C	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr12	7503618	7503619	chr12:7503619:A:G	rs149430282	A	G	A	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr12	8036732	8036733	chr12:8036733:C:T	rs11057000	C	T	C	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr12	8036766	8036767	chr12:8036767:T:C	rs11057001	T	C	T	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr12	8541670	8541671	chr12:8541671:T:G	rs4883167	T	G	G	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr12	8546633	8546634	chr12:8546634:A:C	rs10770849	A	C	a	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr12	8572745	8572746	chr12:8572746:A:C	rs111565526	A	C	A	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr12	8682191	8682192	chr12:8682192:T:C	rs10129059	T	C	T	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr12	8819371	8819372	chr12:8819372:T:C	rs4433626	T	C	T	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr12	9128768	9128769	chr12:9128769:G:A	rs74060477	G	A	G	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr12	9169310	9169311	chr12:9169311:G:C	rs10771386	G	C	C	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr12	9244341	9244342	chr12:9244342:G:A	rs2059759	G	A	A	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr12	9467205	9467206	chr12:9467206:C:T	rs767679899	C	T	C	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr12	9709951	9709952	chr12:9709952:A:C	rs11052604	A	C	A	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr12	9712560	9712561	chr12:9712561:C:A	rs10772062	C	A	C	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr12	9730514	9730515	chr12:9730515:C:A	rs10772087	C	A	C	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr12	9743331	9743332	chr12:9743332:C:A	rs79319977	C	A	C	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr12	9793224	9793225	chr12:9793225:A:G	rs10772150	A	G	A	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr12	9793256	9793257	chr12:9793257:G:A	rs10772151	G	A	G	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr12	9853178	9853179	chr12:9853179:A:G	rs2594072	A	G	G	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr12	9853180	9853181	chr12:9853181:G:A	rs2539933	G	A	A	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr12	10097766	10097767	chr12:10097767:G:A	rs3912645	G	A	A	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr12	10101369	10101370	chr12:10101370:T:C	rs149436220	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.1462160923678635	5.81213749250537	GCCATAAAC
chr12	10148388	10148389	chr12:10148389:T:C	rs181947094	T	C	T	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr12	10309283	10309284	chr12:10309284:A:G	rs10734825	A	G	G	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr12	10339069	10339070	chr12:10339070:T:C	rs34249358	T	C	t	Hoxd9.mouse_homeodomain_1	8	1	-	7.241935125048919	5.775608016563663	CCCATACAA
chr12	10409489	10409490	chr12:10409490:A:C	rs1841958	A	C	C	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr12	10528756	10528757	chr12:10528757:A:G	rs76588112	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	7.1462160923678635	5.81213749250537	GCCATAAAC
chr12	10540747	10540748	chr12:10540748:C:A	rs2900466	C	A	C	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr12	10541220	10541221	chr12:10541221:C:A	rs182453668	C	A	C	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr12	11061612	11061613	chr12:11061613:A:T	rs2708380	A	T	a	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr12	11072862	11072863	chr12:11072863:C:G	rs76480634	C	G	c	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr12	11172095	11172096	chr12:11172096:C:T	rs753391931	C	T	C	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr12	11486688	11486689	chr12:11486689:A:C	rs544051759	A	C	A	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr12	11486703	11486704	chr12:11486704:T:G	rs555359073	T	G	T	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr12	11561719	11561720	chr12:11561720:G:A	rs4763707	G	A	G	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr12	11561731	11561732	chr12:11561732:A:T	rs77210579	A	T	A	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr12	11816635	11816636	chr12:11816636:T:C	rs2710293	T	C	C	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr12	11861050	11861051	chr12:11861051:C:A	rs2855709	C	A	A	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr12	11963199	11963200	chr12:11963200:T:A	rs10772516	T	A	T	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr12	11996047	11996048	chr12:11996048:T:G	rs77842080	T	G	T	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr12	12094681	12094682	chr12:12094682:T:C	rs11054683	T	C	T	Hoxd9.mouse_homeodomain_1	7	1	-	7.091711387329735	0.38788544073800313	CCCATCAAA
chr12	12172507	12172508	chr12:12172508:G:A	rs574715403	G	A	G	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr12	12191086	12191087	chr12:12191087:T:C	rs186247601	T	C	T	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr12	12432194	12432195	chr12:12432195:A:G	rs116298624	A	G	A	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr12	12440347	12440348	chr12:12440348:C:A	rs10845546	C	A	A	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr12	12464753	12464754	chr12:12464754:A:G	rs7303432	A	G	A	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr12	12502860	12502861	chr12:12502861:T:C	rs11054940	T	C	C	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr12	12510699	12510700	chr12:12510700:A:G	rs78670164	A	G	A	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr12	12676469	12676470	chr12:12676470:A:T	rs2111941	A	T	A	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr12	12741531	12741532	chr12:12741532:C:T	rs1861181	C	T	T	Hoxd9.mouse_homeodomain_1	0	1	-	7.9772278588234515	7.188342824966311	GCAATAAAA
chr12	12804422	12804423	chr12:12804423:T:G	rs74063803	T	G	t	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr12	12810809	12810810	chr12:12810810:G:A	rs9943824	G	A	G	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr12	12840074	12840075	chr12:12840075:A:G	chr12:12840075:A:G	A	G	a	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr12	12896374	12896375	chr12:12896375:G:C	rs560909477	G	C	G	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr12	12896381	12896382	chr12:12896382:C:T	rs149217077	C	T	C	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr12	13135703	13135704	chr12:13135704:C:T	rs6488589	C	T	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.075409217893736	8.409487817756228	CCCGTTAAA
chr12	13472774	13472775	chr12:13472775:G:T	rs61607598	G	T	G	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr12	13486622	13486623	chr12:13486623:A:G	rs7971950	A	G	A	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr12	13702697	13702698	chr12:13702698:G:C	rs1012586	G	C	g	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr12	13718547	13718548	chr12:13718548:A:T	rs2268117	A	T	A	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr12	13834904	13834905	chr12:13834905:C:A	rs2268132	C	A	C	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr12	13947502	13947503	chr12:13947503:C:T	rs1558908	C	T	C	Hoxd9.mouse_homeodomain_1	1	1	+	7.522691831404475	6.207889917071467	CCCATAAAG
chr12	14256663	14256664	chr12:14256664:G:C	rs183921581	G	C	G	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr12	14257364	14257365	chr12:14257365:T:A	rs16909788	T	A	T	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr12	14257550	14257551	chr12:14257551:T:C	rs17221259	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.522691831404475	6.188613231541982	CCCATAAAG
chr12	14257567	14257568	chr12:14257568:G:A	rs75948757	G	A	G	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr12	14326791	14326792	chr12:14326792:A:G	rs371810000	A	G	-	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr12	14362769	14362770	chr12:14362770:C:T	rs7311765	C	T	T	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr12	14367264	14367265	chr12:14367265:C:T	rs1178243679	C	T	C	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr12	14629263	14629264	chr12:14629264:G:C	rs10744074	G	C	G	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr12	14701897	14701898	chr12:14701898:A:C	rs247342	A	C	a	Hoxd9.mouse_homeodomain_1	6	1	+	8.027213970992095	6.2801301561512854	CACATAAAA
chr12	14752135	14752136	chr12:14752136:A:T	rs7966152	A	T	a	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr12	14771594	14771595	chr12:14771595:G:C	rs181595499	G	C	G	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr12	14924208	14924209	chr12:14924209:A:T	rs2417403	A	T	A	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr12	14924240	14924241	chr12:14924241:A:G	rs2417404	A	G	G	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr12	14985134	14985135	chr12:14985135:C:G	rs4764145	C	G	G	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr12	15068709	15068710	chr12:15068710:G:A	rs11056323	G	A	A	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr12	15155344	15155345	chr12:15155345:G:A	rs67581511	G	A	G	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr12	15322323	15322324	chr12:15322324:G:A	rs558321018	G	A	G	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr12	15355808	15355809	chr12:15355809:G:A	rs55716164	G	A	A	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr12	15634541	15634542	chr12:15634542:C:T	rs73311006	C	T	C	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr12	15782638	15782639	chr12:15782639:A:C	rs77453355	A	C	A	Hoxd9.mouse_homeodomain_1	4	1	-	7.889898683853121	1.0480802365225155	ACCATAAAA
chr12	16112134	16112135	chr12:16112135:G:T	rs73312639	G	T	G	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr12	16186782	16186783	chr12:16186783:A:G	rs2417540	A	G	A	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr12	16186804	16186805	chr12:16186805:G:T	rs2417541	G	T	T	Hoxd9.mouse_homeodomain_1	2	1	-	8.027213970992095	7.325658112105286	CACATAAAA
chr12	16324364	16324365	chr12:16324365:G:A	rs7965044	G	A	A	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr12	16955234	16955235	chr12:16955235:T:G	rs77486175	T	G	T	Hoxd9.mouse_homeodomain_1	5	1	-	7.34470511784777	5.447397565287774	GCCGTAAAA
chr12	17028324	17028325	chr12:17028325:A:G	rs113846845	A	G	A	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr12	17472905	17472906	chr12:17472906:A:G	rs34725836	A	G	A	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr12	17719715	17719716	chr12:17719716:A:G	rs61925684	A	G	A	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr12	18265694	18265695	chr12:18265695:T:A	rs10770346	T	A	T	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr12	18556197	18556198	chr12:18556198:A:G	rs11044181	A	G	A	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr12	18556200	18556201	chr12:18556201:A:G	rs114259704	A	G	A	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr12	18738144	18738145	chr12:18738145:T:C	rs1075421	T	C	T	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr12	18861408	18861409	chr12:18861409:C:T	rs17424294	C	T	t	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr12	18919750	18919751	chr12:18919751:G:A	rs35922856	G	A	A	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr12	18920101	18920102	chr12:18920102:C:T	rs75001290	C	T	C	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr12	19145192	19145193	chr12:19145193:A:T	rs1025815792	A	T	A	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr12	19201615	19201616	chr12:19201616:T:C	rs1586843	T	C	T	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr12	19301472	19301473	chr12:19301473:G:A	rs2638440	G	A	G	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr12	19515332	19515333	chr12:19515333:T:C	rs75497316	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.027213970992095	6.693135371129603	CACATAAAA
chr12	19553928	19553929	chr12:19553929:G:T	rs56059528	G	T	G	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr12	19571097	19571098	chr12:19571098:C:A	rs7399200	C	A	C	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr12	19674195	19674196	chr12:19674196:A:T	rs73348958	A	T	A	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr12	19710013	19710014	chr12:19710014:G:A	rs117851780	G	A	G	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr12	19710030	19710031	chr12:19710031:G:A	rs7969882	G	A	G	Hoxd9.mouse_homeodomain_1	0	1	-	8.98901893988973	7.094471634580788	CCCATAAAA
chr12	19710045	19710046	chr12:19710046:C:T	rs4454792	C	T	T	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr12	19887005	19887006	chr12:19887006:T:A	rs16922248	T	A	A	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr12	19923363	19923364	chr12:19923364:G:A	rs10841409	G	A	A	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr12	19978470	19978471	chr12:19978471:A:G	rs138506724	A	G	A	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr12	20018392	20018393	chr12:20018393:C:G	rs10743350	C	G	C	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr12	20018419	20018420	chr12:20018420:C:A	rs2579291	C	A	A	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr12	20018430	20018431	chr12:20018431:T:C	rs60026950	T	C	T	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr12	20053966	20053967	chr12:20053967:T:G	rs61910923	T	G	G	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr12	20212496	20212497	chr12:20212497:C:T	rs149284511	C	T	C	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr12	20212501	20212502	chr12:20212502:T:C	rs114964323	T	C	T	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr12	20233645	20233646	chr12:20233646:C:G	rs77959308	C	G	C	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr12	20289713	20289714	chr12:20289714:T:C	rs77800433	T	C	C	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr12	20436455	20436456	chr12:20436456:A:G	rs11045245	A	G	A	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr12	20946904	20946905	chr12:20946905:A:G	rs572959252	A	G	a	Hoxd9.mouse_homeodomain_1	4	1	-	7.091711387329735	4.436664742467157	CCCATCAAA
chr12	20946906	20946907	chr12:20946907:G:C	rs115252922	G	C	g	Hoxd9.mouse_homeodomain_1	2	1	-	7.091711387329735	3.623719729877405	CCCATCAAA
chr12	21452820	21452821	chr12:21452821:A:G	rs4762833	A	G	G	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr12	21509813	21509814	chr12:21509814:C:G	rs10841837	C	G	C	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr12	21642717	21642718	chr12:21642718:T:C	rs759934	T	C	T	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr12	22023408	22023409	chr12:22023409:A:G	rs6487265	A	G	G	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr12	22023429	22023430	chr12:22023430:A:G	rs4376953	A	G	G	Hoxd9.mouse_homeodomain_1	4	1	-	8.287463081002919	5.632416436140341	CCAATAAAA
chr12	22544383	22544384	chr12:22544384:A:G	chr12:22544384:A:G	A	G	A	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr12	22544385	22544386	chr12:22544386:G:A	rs143999993	G	A	G	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr12	22618749	22618750	chr12:22618750:G:C	rs74371575	G	C	G	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr12	22914367	22914368	chr12:22914368:C:T	rs2467110	C	T	C	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr12	23706196	23706197	chr12:23706197:A:G	rs1382825	A	G	A	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr12	23816826	23816827	chr12:23816827:G:A	rs10771033	G	A	G	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr12	23946129	23946130	chr12:23946130:T:C	rs16926892	T	C	T	Hoxd9.mouse_homeodomain_1	5	1	-	7.9772278588234515	1.603038140576896	GCAATAAAA
chr12	24036977	24036978	chr12:24036978:A:G	rs17482874	A	G	A	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr12	24080544	24080545	chr12:24080545:G:A	rs11047249	G	A	G	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr12	24138789	24138790	chr12:24138790:A:G	rs140045634	A	G	A	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr12	24697624	24697625	chr12:24697625:T:C	rs10842395	T	C	C	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr12	24721371	24721372	chr12:24721372:C:T	rs7955343	C	T	C	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr12	24796381	24796382	chr12:24796382:T:C	rs2046522	T	C	T	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr12	24820910	24820911	chr12:24820911:C:A	rs1471844	C	A	A	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr12	24913852	24913853	chr12:24913853:C:G	rs12580682	C	G	C	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr12	24931520	24931521	chr12:24931521:C:G	rs12366540	C	G	C	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr12	25023974	25023975	chr12:25023975:G:A	rs73076093	G	A	G	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr12	25730617	25730618	chr12:25730618:C:T	rs78175651	C	T	C	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr12	25852592	25852593	chr12:25852593:C:A	rs12227123	C	A	C	Hoxd9.mouse_homeodomain_1	1	1	+	8.678783717710262	7.716978748812629	GCCATAAAA
chr12	25997553	25997554	chr12:25997554:C:T	rs11832469	C	T	C	Hoxd9.mouse_homeodomain_1	3	1	-	7.654940340027237	8.98901893988973	CCCGTAAAA
chr12	26119600	26119601	chr12:26119601:C:A	rs146921383	C	A	C	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr12	26278015	26278016	chr12:26278016:A:G	rs34122204	A	G	A	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr12	26291163	26291164	chr12:26291164:G:T	rs11048447	G	T	G	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr12	26340880	26340881	chr12:26340881:C:T	rs11048473	C	T	C	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr12	26538265	26538266	chr12:26538266:A:G	rs1531928	A	G	A	Hoxd9.mouse_homeodomain_1	6	1	+	8.98901893988973	2.285192993297999	CCCATAAAA
chr12	26626675	26626676	chr12:26626676:T:C	rs16931102	T	C	T	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr12	26745377	26745378	chr12:26745378:C:T	rs116907761	C	T	C	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr12	26769682	26769683	chr12:26769683:T:G	rs12814680	T	G	G	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr12	26810402	26810403	chr12:26810403:A:G	rs10842797	A	G	A	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr12	26979095	26979096	chr12:26979096:A:G	rs11048792	A	G	A	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr12	27498365	27498366	chr12:27498366:A:T	rs366448	A	T	T	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr12	27635586	27635587	chr12:27635587:T:C	rs150791218	T	C	T	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr12	27642555	27642556	chr12:27642556:C:T	rs3794274	C	T	C	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr12	27862457	27862458	chr12:27862458:G:A	rs10743612	G	A	G	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr12	27907678	27907679	chr12:27907679:T:C	rs7964976	T	C	T	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr12	28033274	28033275	chr12:28033275:T:C	rs10771400	T	C	C	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr12	28072531	28072532	chr12:28072532:A:G	rs406172	A	G	G	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr12	28124851	28124852	chr12:28124852:C:T	rs76409026	C	T	T	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr12	28313637	28313638	chr12:28313638:A:G	rs7310297	A	G	A	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr12	28346941	28346942	chr12:28346942:C:T	rs11049546	C	T	c	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr12	28498981	28498982	chr12:28498982:T:C	rs11049669	T	C	T	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr12	28568773	28568774	chr12:28568774:T:G	rs1912782	T	G	T	Hoxd9.mouse_homeodomain_1	7	1	-	8.099252595576761	5.209836825546175	GCCATTAAA
chr12	28568791	28568792	chr12:28568792:G:A	rs1355471	G	A	A	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr12	28788462	28788463	chr12:28788463:A:G	rs4931094	A	G	A	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr12	28828271	28828272	chr12:28828272:C:A	rs10843249	C	A	C	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr12	28869737	28869738	chr12:28869738:G:A	rs150485776	G	A	G	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr12	28899976	28899977	chr12:28899977:G:A	rs753013	G	A	G	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr12	29033814	29033815	chr12:29033815:T:G	rs7962367	T	G	T	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr12	29113542	29113543	chr12:29113543:T:C	rs986569	T	C	T	Hoxd9.mouse_homeodomain_1	6	1	-	8.287463081002919	1.5836371344111884	CCAATAAAA
chr12	29132643	29132644	chr12:29132644:G:A	rs11050071	G	A	a	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr12	29282741	29282742	chr12:29282742:A:G	rs1006409	A	G	A	Hoxd9.mouse_homeodomain_1	4	1	-	7.889898683853121	5.234852038990543	ACCATAAAA
chr12	29535563	29535564	chr12:29535564:T:C	rs299454	T	C	T	Hoxd9.mouse_homeodomain_1	6	1	-	7.889898683853121	1.18607273726139	ACCATAAAA
chr12	29712927	29712928	chr12:29712928:G:A	rs11050404	G	A	G	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr12	29719860	29719861	chr12:29719861:C:T	rs7959334	C	T	T	Hoxd9.mouse_homeodomain_1	0	1	-	7.9772278588234515	7.188342824966311	GCAATAAAA
chr12	29738215	29738216	chr12:29738216:A:C	rs1370874	A	C	A	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr12	29842331	29842332	chr12:29842332:C:T	rs12581400	C	T	C	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr12	29951348	29951349	chr12:29951349:G:A	rs10771609	G	A	G	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr12	30031140	30031141	chr12:30031141:G:T	rs4930876	G	T	G	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr12	30031144	30031145	chr12:30031145:C:T	rs7484342	C	T	T	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr12	30031160	30031161	chr12:30031161:T:G	rs75882757	T	G	T	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr12	30121220	30121221	chr12:30121221:T:G	rs10843612	T	G	G	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr12	30188083	30188084	chr12:30188084:A:G	rs1531948	A	G	G	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr12	30269915	30269916	chr12:30269916:T:C	rs1429630	T	C	C	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr12	30269942	30269943	chr12:30269943:A:G	rs4931311	A	G	A	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr12	30536266	30536267	chr12:30536267:G:T	rs1872366	G	T	T	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr12	30657508	30657509	chr12:30657509:G:C	rs6487925	G	C	C	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr12	30755479	30755480	chr12:30755480:C:A	rs73082007	C	A	C	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr12	30770017	30770018	chr12:30770018:A:G	rs10843836	A	G	G	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr12	30793692	30793693	chr12:30793693:G:A	rs142626108	G	A	G	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr12	30908927	30908928	chr12:30908928:G:A	rs74596162	G	A	G	Hoxd9.mouse_homeodomain_1	1	1	-	7.654940340027237	6.34013842569423	CCCGTAAAA
chr12	30917085	30917086	chr12:30917086:C:T	rs33222	C	T	C	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr12	30939439	30939440	chr12:30939440:T:C	rs2241325	T	C	T	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr12	30991601	30991602	chr12:30991602:T:C	rs76655009	T	C	T	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr12	31072843	31072844	chr12:31072844:G:A	rs7297568	G	A	G	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr12	31106641	31106642	chr12:31106642:A:G	rs1974753	A	G	G	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr12	31106659	31106660	chr12:31106660:G:T	rs3862402	G	T	G	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr12	31128311	31128312	chr12:31128312:T:C	rs41482048	T	C	.	Hoxd9.mouse_homeodomain_1	3	1	-	8.409487817756228	7.075409217893736	CCCATTAAA
chr12	31323324	31323325	chr12:31323325:T:G	rs144629391	T	G	T	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr12	31327318	31327319	chr12:31327319:T:C	rs78824259	T	C	C	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr12	31331675	31331676	chr12:31331676:A:C	rs11051391	A	C	A	Hoxd9.mouse_homeodomain_1	7	1	+	7.716978748812629	4.827562978782042	GACATAAAA
chr12	31361064	31361065	chr12:31361065:G:A	rs2090772	G	A	A	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr12	31630072	31630073	chr12:31630073:A:G	rs12827275	A	G	A	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr12	31655412	31655413	chr12:31655413:C:T	rs10843992	C	T	C	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr12	31751428	31751429	chr12:31751429:C:T	rs11051559	C	T	C	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr12	31817271	31817272	chr12:31817272:G:A	rs36123158	G	A	G	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr12	31838983	31838984	chr12:31838984:T:G	rs12300775	T	G	t	Hoxd9.mouse_homeodomain_1	3	1	-	8.027213970992095	1.4517058667886147	CACATAAAA
chr12	31867960	31867961	chr12:31867961:G:A	rs1259716	G	A	G	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr12	31881889	31881890	chr12:31881890:A:T	rs2625110	A	T	N	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr12	31894544	31894545	chr12:31894545:G:T	rs7977472	G	T	G	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr12	32001692	32001693	chr12:32001693:A:T	rs7954631	A	T	A	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr12	32069711	32069712	chr12:32069712:C:T	rs10844108	C	T	C	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr12	32198444	32198445	chr12:32198445:G:T	rs10844151	G	T	G	Hoxd9.mouse_homeodomain_1	0	1	+	7.9772278588234515	6.392915775693977	GCAATAAAA
chr12	32324056	32324057	chr12:32324057:G:A	rs171886	G	A	G	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr12	32436472	32436473	chr12:32436473:G:A	rs1500874	G	A	G	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr12	32562367	32562368	chr12:32562368:T:G	rs79973043	T	G	T	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr12	32724137	32724138	chr12:32724138:C:T	rs7300090	C	T	c	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr12	32921451	32921452	chr12:32921452:T:G	rs6488105	T	G	G	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr12	32930186	32930187	chr12:32930187:G:T	rs11052315	G	T	T	Hoxd9.mouse_homeodomain_1	0	1	-	8.287463081002919	7.188342824966311	CCAATAAAA
chr12	33515153	33515154	chr12:33515154:T:C	rs78601210	T	C	T	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr12	33588524	33588525	chr12:33588525:T:G	rs1200441393	T	G	T	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr12	33876941	33876942	chr12:33876942:T:G	rs11052974	T	G	T	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr12	33994998	33994999	chr12:33994999:C:T	rs11053035	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	-	7.9772278588234515	7.188342824966311	GCAATAAAA
chr12	34461591	34461592	chr12:34461592:C:T	rs78222468	C	T	.	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr12	34601451	34601452	chr12:34601452:C:T	rs74072777	C	T	.	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr12	36558183	36558184	chr12:36558184:A:T	rs1414359011	A	T	.	Hoxd9.mouse_homeodomain_1	3	1	+	7.241935125048919	5.238453988240274	CCCATACAA
chr12	37855021	37855022	chr12:37855022:C:A	chr12:37855022:C:A	C	A	.	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr12	38154470	38154471	chr12:38154471:C:T	rs12424222	C	T	c	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr12	38251848	38251849	chr12:38251849:T:G	rs141867311	T	G	T	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr12	38547626	38547627	chr12:38547627:C:T	rs2730931	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	+	8.287463081002919	6.392915775693977	CCAATAAAA
chr12	38556152	38556153	chr12:38556153:G:C	rs9805091	G	C	G	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr12	38624456	38624457	chr12:38624457:C:T	rs1875609	C	T	C	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr12	38628467	38628468	chr12:38628468:G:A	rs2653737	G	A	A	Hoxd9.mouse_homeodomain_1	2	1	-	8.678783717710262	2.1913432600866263	GCCATAAAA
chr12	38731088	38731089	chr12:38731089:C:T	rs1684405	C	T	C	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr12	39124386	39124387	chr12:39124387:C:T	rs767450115	C	T	C	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr12	39189365	39189366	chr12:39189366:G:A	rs4633501	G	A	g	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr12	39582173	39582174	chr12:39582174:T:C	rs80194462	T	C	T	Hoxd9.mouse_homeodomain_1	1	1	-	8.027213970992095	2.5794857111073646	CACATAAAA
chr12	39628226	39628227	chr12:39628227:C:A	rs4077987	C	A	A	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr12	39847613	39847614	chr12:39847614:T:C	rs73103008	T	C	C	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr12	39852304	39852305	chr12:39852305:G:C	rs66924731	G	C	G	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr12	39959626	39959627	chr12:39959627:C:G	rs7305863	C	G	C	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr12	39984970	39984971	chr12:39984971:C:T	rs12824918	C	T	T	Hoxd9.mouse_homeodomain_1	0	1	+	8.98901893988973	7.094471634580788	CCCATAAAA
chr12	39984981	39984982	chr12:39984982:G:A	rs28370628	G	A	A	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr12	39993317	39993318	chr12:39993318:T:G	rs10506141	T	G	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.678783717710262	2.1032756135067814	GCCATAAAA
chr12	40095002	40095003	chr12:40095003:T:C	rs17442469	T	C	T	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr12	40312728	40312729	chr12:40312729:G:A	rs7302503	G	A	A	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr12	40446202	40446203	chr12:40446203:C:T	rs1346308	C	T	T	Hoxd9.mouse_homeodomain_1	0	1	-	7.716978748812629	6.928093714955487	GACATAAAA
chr12	40449457	40449458	chr12:40449458:A:G	rs17128203	A	G	A	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr12	40602544	40602545	chr12:40602545:A:G	rs6581838	A	G	G	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr12	40862397	40862398	chr12:40862398:T:C	rs312279	T	C	C	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr12	41193853	41193854	chr12:41193854:G:T	rs78968152	G	T	G	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr12	41336111	41336112	chr12:41336112:C:G	rs2141105	C	G	G	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr12	41344968	41344969	chr12:41344969:A:G	rs7959175	A	G	G	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr12	41615417	41615418	chr12:41615418:G:A	rs287036	G	A	G	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr12	41765714	41765715	chr12:41765715:G:T	rs872168	G	T	G	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr12	42198787	42198788	chr12:42198788:T:G	rs712122	T	G	G	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr12	42310090	42310091	chr12:42310091:G:A	rs10880282	G	A	G	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr12	42324749	42324750	chr12:42324750:G:A	rs11181422	G	A	A	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr12	42362713	42362714	chr12:42362714:C:G	rs11181459	C	G	C	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr12	42421750	42421751	chr12:42421751:T:C	rs1796357	T	C	T	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr12	42820144	42820145	chr12:42820145:G:A	rs11181702	G	A	A	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr12	42933577	42933578	chr12:42933578:T:C	rs10748343	T	C	C	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr12	43127414	43127415	chr12:43127415:A:C	rs1184844	A	C	C	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr12	43162245	43162246	chr12:43162246:T:C	rs8181625	T	C	C	Hoxd9.mouse_homeodomain_1	5	1	-	7.889898683853121	1.5157089656065659	ACCATAAAA
chr12	43165883	43165884	chr12:43165884:A:T	rs7953134	A	T	T	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr12	43339206	43339207	chr12:43339207:A:C	rs10880459	A	C	A	Hoxd9.mouse_homeodomain_1	4	1	-	7.716978748812629	0.875160301482023	GACATAAAA
chr12	43346810	43346811	chr12:43346811:G:A	rs5027377	G	A	G	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr12	43408488	43408489	chr12:43408489:G:A	rs12830181	G	A	G	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr12	43408515	43408516	chr12:43408516:C:A	rs10880485	C	A	C	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr12	43453879	43453880	chr12:43453880:A:G	rs11182085	A	G	A	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr12	43550222	43550223	chr12:43550223:C:T	rs275634	C	T	T	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr12	43843452	43843453	chr12:43843453:C:T	rs12298970	C	T	T	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr12	43861743	43861744	chr12:43861744:G:A	rs149815552	G	A	G	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr12	44022139	44022140	chr12:44022140:A:G	rs543642402	A	G	A	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr12	44592981	44592982	chr12:44592982:C:T	rs4768065	C	T	c	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr12	44612617	44612618	chr12:44612618:G:C	rs17571851	G	C	G	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr12	44763293	44763294	chr12:44763294:C:T	rs4768570	C	T	C	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr12	45089551	45089552	chr12:45089552:T:G	rs150690733	T	G	T	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr12	45101549	45101550	chr12:45101550:C:T	rs10880739	C	T	C	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr12	45463711	45463712	chr12:45463712:T:C	rs12817931	T	C	T	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr12	45568633	45568634	chr12:45568634:G:A	rs4267127	G	A	A	Hoxd9.mouse_homeodomain_1	0	1	+	7.716978748812629	6.928093714955487	GACATAAAA
chr12	45808116	45808117	chr12:45808117:T:G	rs75304794	T	G	T	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr12	45987944	45987945	chr12:45987945:T:A	rs6582580	T	A	A	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr12	46104064	46104065	chr12:46104065:A:G	rs7134217	A	G	G	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr12	46149299	46149300	chr12:46149300:A:G	rs1345090	A	G	A	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr12	46462436	46462437	chr12:46462437:G:T	rs11183497	G	T	G	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr12	46608562	46608563	chr12:46608563:G:A	rs765707	G	A	G	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr12	46722518	46722519	chr12:46722519:A:G	rs10880995	A	G	A	Hoxd9.mouse_homeodomain_1	4	1	-	7.889898683853121	5.234852038990543	ACCATAAAA
chr12	46724349	46724350	chr12:46724350:G:A	rs4603389	G	A	G	Hoxd9.mouse_homeodomain_1	0	1	-	8.409487817756228	6.514940512447287	CCCATTAAA
chr12	46742280	46742281	chr12:46742281:G:A	rs75120465	G	A	G	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr12	46771539	46771540	chr12:46771540:C:G	rs180408	C	G	G	Hoxd9.mouse_homeodomain_1	0	1	-	7.1462160923678635	7.45645131454733	GCCATAAAC
chr12	46934017	46934018	chr12:46934018:G:A	rs10881013	G	A	G	Hoxd9.mouse_homeodomain_1	1	1	-	8.678783717710262	7.363981803377255	GCCATAAAA
chr12	47038893	47038894	chr12:47038894:A:G	rs10785650	A	G	g	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr12	47038897	47038898	chr12:47038898:A:G	rs146494851	A	G	A	Hoxd9.mouse_homeodomain_1	2	1	+	7.9772278588234515	5.2107920602579325	GCAATAAAA
chr12	47102554	47102555	chr12:47102555:G:A	rs2040674	G	A	A	Hoxd9.mouse_homeodomain_1	0	1	+	8.678783717710262	7.889898683853121	GCCATAAAA
chr12	47139250	47139251	chr12:47139251:A:G	rs75292585	A	G	A	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr12	47278121	47278122	chr12:47278122:A:C	rs214672	A	C	C	Hoxd9.mouse_homeodomain_1	5	1	+	7.45645131454733	5.559143761987334	CCCATAAAC
chr12	47308970	47308971	chr12:47308971:A:G	rs1123746	A	G	A	Hoxd9.mouse_homeodomain_1	2	1	+	7.9772278588234515	5.2107920602579325	GCAATAAAA
chr12	47366262	47366263	chr12:47366263:A:T	rs34692456	A	T	A	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr12	47721302	47721303	chr12:47721303:T:G	rs12819759	T	G	T	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr12	47779437	47779438	chr12:47779438:A:G	rs3759408	A	G	A	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr12	47779438	47779439	chr12:47779439:T:C	rs77323760	T	C	T	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr12	47820421	47820422	chr12:47820422:A:C	rs116339043	A	C	A	Hoxd9.mouse_homeodomain_1	3	1	+	7.241935125048919	0.6664270208454374	CCCATACAA
chr12	47996396	47996397	chr12:47996397:T:C	rs369438810	T	C	T	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr12	48027623	48027624	chr12:48027624:G:T	rs12305182	G	T	G	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr12	48121621	48121622	chr12:48121622:T:A	rs10875745	T	A	T	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr12	48291771	48291772	chr12:48291772:A:G	rs11168510	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.287463081002919	6.953384481140425	CCAATAAAA
chr12	48343461	48343462	chr12:48343462:A:C	rs2732484	A	C	g	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr12	48580943	48580944	chr12:48580944:T:C	rs11168648	T	C	T	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr12	48780472	48780473	chr12:48780473:T:C	rs35468640	T	C	C	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr12	48795783	48795784	chr12:48795784:A:T	rs191841246	A	T	A	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr12	49121346	49121347	chr12:49121347:T:C	rs11168868	T	C	T	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr12	49216443	49216444	chr12:49216444:C:A	rs56119842	C	A	A	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr12	49415651	49415652	chr12:49415652:A:G	rs74088737	A	G	a	Hoxd9.mouse_homeodomain_1	3	1	+	8.287463081002919	6.953384481140425	CCAATAAAA
chr12	49812673	49812674	chr12:49812674:C:T	rs139238497	C	T	C	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr12	49859131	49859132	chr12:49859132:G:A	rs7954572	G	A	A	Hoxd9.mouse_homeodomain_1	2	1	-	7.1462160923678635	0.6587756347442264	GCCATAAAC
chr12	49973551	49973552	chr12:49973552:C:G	rs139985595	C	G	C	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr12	50005470	50005471	chr12:50005471:C:T	rs2307084	C	T	C	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr12	50075423	50075424	chr12:50075424:G:A	rs147965373	G	A	G	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr12	50075455	50075456	chr12:50075456:G:A	rs114629086	G	A	G	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr12	50082374	50082375	chr12:50082375:G:T	rs706794	G	T	t	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr12	50222887	50222888	chr12:50222888:A:C	rs902558499	A	C	A	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr12	50222891	50222892	chr12:50222892:G:C	rs139147577	G	C	G	Hoxd9.mouse_homeodomain_1	0	1	+	8.678783717710262	8.98901893988973	GCCATAAAA
chr12	50248530	50248531	chr12:50248531:A:G	rs3815671	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.287463081002919	6.953384481140425	CCAATAAAA
chr12	50258169	50258170	chr12:50258170:G:A	rs192184474	G	A	G	Hoxd9.mouse_homeodomain_1	2	1	-	8.98901893988973	2.5015784822660927	CCCATAAAA
chr12	50336674	50336675	chr12:50336675:C:T	rs7134595	C	T	C	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr12	50505405	50505406	chr12:50505406:A:C	rs575264017	A	C	A	Hoxd9.mouse_homeodomain_1	6	1	+	6.943160709270972	5.196076894430161	CCCATTAAG
chr12	50573196	50573197	chr12:50573197:G:A	rs10783373	G	A	G	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr12	50580757	50580758	chr12:50580758:G:C	rs34867510	G	C	G	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr12	50762796	50762797	chr12:50762797:A:G	rs4768866	A	G	A	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr12	50763315	50763316	chr12:50763316:T:A	rs10876083	T	A	A	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr12	51029107	51029108	chr12:51029108:A:G	rs73100377	A	G	A	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr12	51083772	51083773	chr12:51083773:G:T	rs114479219	G	T	G	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr12	51219350	51219351	chr12:51219351:A:G	rs61276106	A	G	A	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr12	51247754	51247755	chr12:51247755:C:G	rs117208786	C	G	C	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr12	51297766	51297767	chr12:51297767:A:G	rs7955476	A	G	G	Hoxd9.mouse_homeodomain_1	5	1	+	7.716978748812629	1.3427890305660735	GACATAAAA
chr12	51687180	51687181	chr12:51687181:C:T	rs4761829	C	T	T	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr12	51878294	51878295	chr12:51878295:T:A	rs772216	T	A	A	Hoxd9.mouse_homeodomain_1	3	1	-	8.287463081002919	6.2839819441942755	CCAATAAAA
chr12	52016895	52016896	chr12:52016896:G:A	rs1039443391	G	A	G	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr12	52092454	52092455	chr12:52092455:G:A	rs4762049	G	A	g	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr12	52116869	52116870	chr12:52116870:T:C	rs530368812	T	C	T	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr12	52123436	52123437	chr12:52123437:T:C	rs78788247	T	C	C	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr12	52145799	52145800	chr12:52145800:A:G	rs114907602	A	G	A	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr12	52220449	52220450	chr12:52220450:G:C	rs10876249	G	C	C	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr12	52258776	52258777	chr12:52258777:G:A	rs17740348	G	A	G	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr12	52291648	52291649	chr12:52291649:C:G	rs12809407	C	G	C	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr12	52298809	52298810	chr12:52298810:A:T	rs7309438	A	T	A	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr12	52630899	52630900	chr12:52630900:A:C	rs17676308	A	C	A	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr12	52671473	52671474	chr12:52671474:T:C	rs646526	T	C	A	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr12	52741327	52741328	chr12:52741328:A:T	rs7969734	A	T	A	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr12	52741332	52741333	chr12:52741333:A:T	rs7969737	A	T	T	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr12	52748437	52748438	chr12:52748438:T:C	rs673077	T	C	T	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr12	52752947	52752948	chr12:52752948:G:T	rs7488334	G	T	G	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr12	52873192	52873193	chr12:52873193:T:G	rs114065158	T	G	T	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr12	52903771	52903772	chr12:52903772:C:T	rs188786175	C	T	C	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr12	52913129	52913130	chr12:52913130:A:C	chr12:52913130:A:C	A	C	A	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr12	53219743	53219744	chr12:53219744:A:C	chr12:53219744:A:C	A	C	A	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr12	53219770	53219771	chr12:53219771:A:G	rs565390860	A	G	A	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr12	53333760	53333761	chr12:53333761:T:C	rs930900	T	C	C	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr12	53391952	53391953	chr12:53391953:C:G	rs118140185	C	G	C	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr12	53412870	53412871	chr12:53412871:C:T	rs17695156	C	T	c	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr12	53430723	53430724	chr12:53430724:G:C	rs784888	G	C	G	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr12	53601706	53601707	chr12:53601707:A:G	rs11170608	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	7.9772278588234515	6.643149258960959	GCAATAAAA
chr12	53677543	53677544	chr12:53677544:T:C	rs146886097	T	C	T	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr12	53697151	53697152	chr12:53697152:C:T	rs139414711	C	T	C	Hoxd9.mouse_homeodomain_1	2	1	+	8.409487817756228	1.922047360132591	CCCATTAAA
chr12	53705584	53705585	chr12:53705585:G:A	rs17765253	G	A	G	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr12	53770599	53770600	chr12:53770600:A:G	rs11834946	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.287463081002919	6.953384481140425	CCAATAAAA
chr12	54009599	54009600	chr12:54009600:G:T	rs2083837	G	T	G	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr12	54374738	54374739	chr12:54374739:G:C	rs73113372	G	C	G	Hoxd9.mouse_homeodomain_1	0	1	-	7.091711387329735	6.781476165150267	CCCATCAAA
chr12	54603498	54603499	chr12:54603499:G:C	rs1157486	G	C	G	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr12	54826466	54826467	chr12:54826467:A:G	rs10876619	A	G	A	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr12	55049964	55049965	chr12:55049965:A:G	rs76320954	A	G	A	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr12	55144040	55144041	chr12:55144041:T:A	rs7971086	T	A	T	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr12	55176698	55176699	chr12:55176699:G:A	rs11171353	G	A	g	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr12	55642283	55642284	chr12:55642284:G:A	rs12300595	G	A	G	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr12	55642303	55642304	chr12:55642304:A:T	rs66592094	A	T	A	Hoxd9.mouse_homeodomain_1	4	1	-	8.98901893988973	2.147200492559124	CCCATAAAA
chr12	55744795	55744796	chr12:55744796:A:C	rs61134397	A	C	A	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr12	55925975	55925976	chr12:55925976:G:A	rs76149942	G	A	G	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr12	56449513	56449514	chr12:56449514:A:T	rs190662761	A	T	A	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr12	56644803	56644804	chr12:56644804:T:C	chr12:56644804:T:C	T	C	T	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr12	56646190	56646191	chr12:56646191:C:A	rs181185330	C	A	C	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr12	56689257	56689258	chr12:56689258:T:C	chr12:56689258:T:C	T	C	T	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr12	56816819	56816820	chr12:56816820:A:G	rs77192336	A	G	A	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr12	56969183	56969184	chr12:56969184:G:T	rs7969312	G	T	-	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr12	57127373	57127374	chr12:57127374:C:T	rs558509985	C	T	C	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr12	57198773	57198774	chr12:57198774:C:T	rs1800168	C	T	C	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr12	57694068	57694069	chr12:57694069:G:A	rs148764989	G	A	G	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr12	57939689	57939690	chr12:57939690:G:A	rs543965478	G	A	.	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr12	58268588	58268589	chr12:58268589:G:A	rs117793508	G	A	G	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr12	58365015	58365016	chr12:58365016:A:G	rs80205623	A	G	A	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr12	58365157	58365158	chr12:58365158:A:C	rs150968684	A	C	A	Hoxd9.mouse_homeodomain_1	6	1	+	7.9772278588234515	6.230144043982641	GCAATAAAA
chr12	58387293	58387294	chr12:58387294:G:A	rs150561609	G	A	G	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr12	58572662	58572663	chr12:58572663:G:A	rs2372235	G	A	G	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr12	58811670	58811671	chr12:58811671:A:G	chr12:58811671:A:G	A	G	A	Hoxd9.mouse_homeodomain_1	5	1	+	7.654940340027237	1.2807506217806814	CCCGTAAAA
chr12	58917422	58917423	chr12:58917423:T:C	rs956996717	T	C	T	Hoxd9.mouse_homeodomain_1	8	1	-	8.099252595576761	6.632925487091506	GCCATTAAA
chr12	58917445	58917446	chr12:58917446:C:G	rs12426212	C	G	C	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr12	59036583	59036584	chr12:59036584:G:A	rs10506357	G	A	G	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr12	59338615	59338616	chr12:59338616:A:T	rs7976427	A	T	A	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr12	59500043	59500044	chr12:59500044:A:C	rs10877300	A	C	T	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr12	59744267	59744268	chr12:59744268:A:G	rs2706291	A	G	g	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr12	59744291	59744292	chr12:59744292:G:C	rs2706290	G	C	g	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr12	59808526	59808527	chr12:59808527:C:T	rs925801826	C	T	C	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr12	59808544	59808545	chr12:59808545:A:G	rs376063892	A	G	A	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr12	60148504	60148505	chr12:60148505:C:A	rs7134663	C	A	C	Hoxd9.mouse_homeodomain_1	0	1	+	8.409487817756228	7.3103675617196195	CCCATTAAA
chr12	60594393	60594394	chr12:60594394:G:A	rs61925033	G	A	G	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr12	61046015	61046016	chr12:61046016:C:T	rs12825942	C	T	T	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr12	61098873	61098874	chr12:61098874:G:A	rs10877547	G	A	g	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr12	62312398	62312399	chr12:62312399:A:G	rs10431510	A	G	G	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr12	63207538	63207539	chr12:63207539:T:G	rs7962106	T	G	G	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr12	63298353	63298354	chr12:63298354:G:C	rs61934697	G	C	G	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr12	63658617	63658618	chr12:63658618:C:T	rs11175104	C	T	c	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr12	64092308	64092309	chr12:64092309:G:A	rs73321310	G	A	A	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr12	64583846	64583847	chr12:64583847:C:T	rs75206725	C	T	C	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr12	64666583	64666584	chr12:64666584:G:A	rs1795621	G	A	G	Hoxd9.mouse_homeodomain_1	1	1	-	7.091711387329735	5.776909472996728	CCCATCAAA
chr12	64941666	64941667	chr12:64941667:A:G	rs462387	A	G	G	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr12	64945960	64945961	chr12:64945961:C:T	rs12302159	C	T	C	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr12	65258264	65258265	chr12:65258265:A:G	rs1566318	A	G	A	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr12	65306979	65306980	chr12:65306980:G:A	rs533274527	G	A	G	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr12	65392086	65392087	chr12:65392087:A:T	rs9668058	A	T	T	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr12	65494900	65494901	chr12:65494901:A:G	rs187511126	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.98901893988973	7.654940340027237	CCCATAAAA
chr12	65494912	65494913	chr12:65494913:T:G	rs10784469	T	G	T	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr12	65565299	65565300	chr12:65565300:C:T	rs10748020	C	T	C	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr12	65593477	65593478	chr12:65593478:G:A	rs148256983	G	A	G	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr12	65636662	65636663	chr12:65636663:A:G	rs7300688	A	G	G	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr12	65642959	65642960	chr12:65642960:C:T	rs4762113	C	T	C	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr12	65936420	65936421	chr12:65936421:A:C	rs17101913	A	C	A	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr12	66117589	66117590	chr12:66117590:T:C	rs1898304	T	C	T	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr12	66192362	66192363	chr12:66192363:T:C	rs56156535	T	C	T	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr12	66267392	66267393	chr12:66267393:A:C	rs11176117	A	C	C	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr12	66297168	66297169	chr12:66297169:C:T	rs974349	C	T	T	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr12	66325544	66325545	chr12:66325545:G:C	rs78186225	G	C	G	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr12	66376239	66376240	chr12:66376240:A:T	rs1495497	A	T	T	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr12	66376254	66376255	chr12:66376255:G:A	rs1495496	G	A	G	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr12	66780112	66780113	chr12:66780113:A:T	rs12829886	A	T	A	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr12	66904031	66904032	chr12:66904032:G:C	rs10878523	G	C	C	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr12	67435161	67435162	chr12:67435162:A:G	rs17249125	A	G	A	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr12	67452059	67452060	chr12:67452060:C:A	rs148553530	C	A	C	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr12	67483791	67483792	chr12:67483792:G:C	rs73126385	G	C	G	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr12	67593406	67593407	chr12:67593407:G:T	rs2700143	G	T	T	Hoxd9.mouse_homeodomain_1	1	1	-	7.889898683853121	6.928093714955487	ACCATAAAA
chr12	67811823	67811824	chr12:67811824:A:G	rs1819844	A	G	G	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr12	67939439	67939440	chr12:67939440:C:T	rs10878699	C	T	C	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr12	67967162	67967163	chr12:67967163:A:G	rs1548653	A	G	A	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr12	68391251	68391252	chr12:68391252:A:G	rs76692993	A	G	A	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr12	68617734	68617735	chr12:68617735:G:A	rs28612379	G	A	A	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr12	68761068	68761069	chr12:68761069:G:A	rs147281597	G	A	C	Hoxd9.mouse_homeodomain_1	3	1	+	7.34470511784777	8.678783717710262	GCCGTAAAA
chr12	68976657	68976658	chr12:68976658:T:C	rs12298772	T	C	T	Hoxd9.mouse_homeodomain_1	5	1	-	8.027213970992095	1.6530242527455408	CACATAAAA
chr12	69070770	69070771	chr12:69070771:A:T	rs79083087	A	T	A	Hoxd9.mouse_homeodomain_1	4	1	-	8.027213970992095	1.1853955236614904	CACATAAAA
chr12	69591671	69591672	chr12:69591672:T:A	rs3858594	T	A	T	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr12	69602838	69602839	chr12:69602839:T:G	rs710762	T	G	T	Hoxd9.mouse_homeodomain_1	8	1	-	8.287463081002919	6.75489545566052	CCAATAAAA
chr12	69603234	69603235	chr12:69603235:C:G	rs139468282	C	G	C	Hoxd9.mouse_homeodomain_1	0	1	+	8.287463081002919	7.9772278588234515	CCAATAAAA
chr12	69684391	69684392	chr12:69684392:C:T	rs710714	C	T	C	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr12	69984610	69984611	chr12:69984611:C:T	rs710692	C	T	T	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr12	70079433	70079434	chr12:70079434:G:A	rs3098305	G	A	G	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr12	70398801	70398802	chr12:70398802:G:T	rs12317962	G	T	G	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr12	70484635	70484636	chr12:70484636:C:T	rs11178257	C	T	C	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr12	70576915	70576916	chr12:70576916:T:C	rs112068642	T	C	T	Hoxd9.mouse_homeodomain_1	8	1	-	8.98901893988973	7.522691831404475	CCCATAAAA
chr12	70774107	70774108	chr12:70774108:T:C	rs7132092	T	C	T	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr12	70815828	70815829	chr12:70815829:T:C	rs2458437	T	C	t	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr12	70983241	70983242	chr12:70983242:G:A	rs75510271	G	A	G	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr12	71062090	71062091	chr12:71062091:G:T	rs3942254	G	T	T	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr12	71107966	71107967	chr12:71107967:A:G	chr12:71107967:A:G	A	G	A	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr12	71216761	71216762	chr12:71216762:A:G	rs3913059	A	G	A	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr12	71313440	71313441	chr12:71313441:C:T	rs4760924	C	T	T	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr12	71335549	71335550	chr12:71335550:T:C	rs74380633	T	C	C	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr12	71351320	71351321	chr12:71351321:A:G	rs7488914	A	G	G	Hoxd9.mouse_homeodomain_1	0	1	+	7.889898683853121	8.678783717710262	ACCATAAAA
chr12	71371270	71371271	chr12:71371271:T:C	rs7954903	T	C	T	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr12	71708088	71708089	chr12:71708089:A:G	rs1072390	A	G	G	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr12	71780289	71780290	chr12:71780290:C:G	rs10879336	C	G	C	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr12	71874183	71874184	chr12:71874184:C:A	rs58184114	C	A	C	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr12	72079315	72079316	chr12:72079316:G:A	rs2461697	G	A	G	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr12	72321116	72321117	chr12:72321117:A:G	rs17111044	A	G	G	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr12	72333937	72333938	chr12:72333938:G:A	rs3858590	G	A	G	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr12	72338223	72338224	chr12:72338224:A:G	rs17727047	A	G	A	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr12	72825746	72825747	chr12:72825747:A:G	rs10784994	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	7.241935125048919	5.907856525186427	CCCATACAA
chr12	73548579	73548580	chr12:73548580:A:C	rs4882912	A	C	A	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr12	73975206	73975207	chr12:73975207:G:C	rs7955311	G	C	G	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr12	74039302	74039303	chr12:74039303:A:G	rs117522646	A	G	a	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr12	74253804	74253805	chr12:74253805:G:C	rs7133578	G	C	G	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr12	74372640	74372641	chr12:74372641:C:A	rs6582217	C	A	C	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr12	74647006	74647007	chr12:74647007:T:C	rs11180131	T	C	T	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr12	74896275	74896276	chr12:74896276:C:T	rs2136037	C	T	T	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr12	75512411	75512412	chr12:75512412:T:C	rs3809121	T	C	T	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr12	75528436	75528437	chr12:75528437:A:G	rs1552040	A	G	G	Hoxd9.mouse_homeodomain_1	8	1	+	7.9772278588234515	6.510900750338196	GCAATAAAA
chr12	75606786	75606787	chr12:75606787:T:C	rs78022467	T	C	T	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr12	75659226	75659227	chr12:75659227:A:G	rs79482501	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	6.943160709270972	5.60908210940848	CCCATTAAG
chr12	75666749	75666750	chr12:75666750:G:C	rs3736625	G	C	G	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr12	75706573	75706574	chr12:75706574:A:G	rs73124362	A	G	A	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr12	75818068	75818069	chr12:75818069:T:C	rs11611462	T	C	T	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr12	75878580	75878581	chr12:75878581:C:T	rs577777243	C	T	C	Hoxd9.mouse_homeodomain_1	3	1	-	7.654940340027237	8.98901893988973	CCCGTAAAA
chr12	75886132	75886133	chr12:75886133:A:T	rs6582312	A	T	T	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr12	75899336	75899337	chr12:75899337:A:G	rs10506662	A	G	A	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr12	76003324	76003325	chr12:76003325:C:G	rs1344796	C	G	C	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr12	76272492	76272493	chr12:76272493:G:A	rs138479835	G	A	g	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr12	76428253	76428254	chr12:76428254:A:G	rs7954730	A	G	G	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr12	76634511	76634512	chr12:76634512:C:T	rs79727142	C	T	C	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr12	76696312	76696313	chr12:76696313:G:A	rs11115052	G	A	G	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr12	76921061	76921062	chr12:76921062:T:C	rs773480	T	C	C	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr12	76962268	76962269	chr12:76962269:G:A	rs114290350	G	A	G	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr12	77392880	77392881	chr12:77392881:G:A	rs189933766	G	A	G	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr12	77587329	77587330	chr12:77587330:T:C	rs77385834	T	C	T	Hoxd9.mouse_homeodomain_1	4	1	+	7.889898683853121	5.234852038990543	ACCATAAAA
chr12	77592458	77592459	chr12:77592459:T:C	rs11105822	T	C	T	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr12	77599825	77599826	chr12:77599826:T:C	rs11105859	T	C	T	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr12	77757283	77757284	chr12:77757284:T:G	rs939459	T	G	T	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr12	77757299	77757300	chr12:77757300:C:G	rs7315223	C	G	C	Hoxd9.mouse_homeodomain_1	8	1	-	7.522691831404475	7.45645131454733	CCCATAAAG
chr12	77895941	77895942	chr12:77895942:T:A	rs78522504	T	A	T	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr12	77932302	77932303	chr12:77932303:A:G	rs1242276	A	G	G	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr12	77973441	77973442	chr12:77973442:G:A	rs11107622	G	A	A	Hoxd9.mouse_homeodomain_1	2	1	-	8.98901893988973	2.5015784822660927	CCCATAAAA
chr12	78038274	78038275	chr12:78038275:A:C	rs11107957	A	C	A	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr12	78090340	78090341	chr12:78090341:A:G	rs300486	A	G	G	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr12	78101975	78101976	chr12:78101976:C:G	rs1868372	C	G	G	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr12	78146835	78146836	chr12:78146836:C:T	rs451824	C	T	T	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr12	78388433	78388434	chr12:78388434:C:T	rs963908	C	T	T	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr12	78646088	78646089	chr12:78646089:T:C	rs185478452	T	C	T	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr12	78793383	78793384	chr12:78793384:G:C	rs565694824	G	C	G	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr12	78878640	78878641	chr12:78878641:A:C	rs140795615	A	C	A	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr12	79142867	79142868	chr12:79142868:G:C	rs144914605	G	C	G	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr12	79237960	79237961	chr12:79237961:C:G	rs6539315	C	G	G	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr12	79351429	79351430	chr12:79351430:G:A	rs17292872	G	A	G	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr12	79414071	79414072	chr12:79414072:A:G	rs1918183	A	G	A	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr12	79453259	79453260	chr12:79453260:A:G	rs11114122	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.287463081002919	6.953384481140425	CCAATAAAA
chr12	79818837	79818838	chr12:79818838:A:C	rs11114251	A	C	A	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr12	80059928	80059929	chr12:80059929:A:C	rs73148325	A	C	A	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr12	80162098	80162099	chr12:80162099:T:C	rs2222828	T	C	C	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr12	80269172	80269173	chr12:80269173:G:A	rs79350170	G	A	G	Hoxd9.mouse_homeodomain_1	2	1	-	8.027213970992095	1.5397735133684596	CACATAAAA
chr12	80369543	80369544	chr12:80369544:A:G	rs10778731	A	G	G	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr12	80444394	80444395	chr12:80444395:C:T	rs60216135	C	T	C	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr12	80703211	80703212	chr12:80703212:C:T	rs2453503	C	T	T	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr12	81078675	81078676	chr12:81078676:C:G	rs11114749	C	G	C	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr12	81111381	81111382	chr12:81111382:G:A	rs4584646	G	A	G	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr12	81120888	81120889	chr12:81120889:A:G	rs7295854	A	G	A	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr12	81174093	81174094	chr12:81174094:G:A	rs7135822	G	A	G	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr12	83059448	83059449	chr12:83059449:C:G	rs11115564	C	G	C	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr12	83266287	83266288	chr12:83266288:C:T	rs139620653	C	T	C	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr12	83824101	83824102	chr12:83824102:G:T	rs56260363	G	T	G	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr12	84033034	84033035	chr12:84033035:C:T	rs10779069	C	T	T	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr12	84186445	84186446	chr12:84186446:C:T	rs12305026	C	T	C	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr12	84245436	84245437	chr12:84245437:A:C	rs12300675	A	C	A	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr12	84517485	84517486	chr12:84517486:T:C	rs138783439	T	C	T	Hoxd9.mouse_homeodomain_1	6	1	-	8.027213970992095	1.3233880244003648	CACATAAAA
chr12	84630534	84630535	chr12:84630535:C:T	rs17784454	C	T	C	Hoxd9.mouse_homeodomain_1	3	1	-	7.34470511784777	8.678783717710262	GCCGTAAAA
chr12	84760339	84760340	chr12:84760340:T:G	rs12371504	T	G	T	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr12	84878793	84878794	chr12:84878794:G:T	rs74489465	G	T	G	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr12	85016792	85016793	chr12:85016793:C:G	rs12300401	C	G	C	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr12	85057566	85057567	chr12:85057567:C:G	rs1375297254	C	G	C	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr12	85739794	85739795	chr12:85739795:A:G	rs9971710	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.287463081002919	6.953384481140425	CCAATAAAA
chr12	85758816	85758817	chr12:85758817:C:T	rs10506923	C	T	C	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr12	85836659	85836660	chr12:85836660:C:G	rs61930082	C	G	C	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr12	85874704	85874705	chr12:85874705:C:T	rs11615953	C	T	C	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr12	85961955	85961956	chr12:85961956:A:G	rs1026085	A	G	G	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr12	86082219	86082220	chr12:86082220:A:C	rs11117184	A	C	a	Hoxd9.mouse_homeodomain_1	6	1	+	8.099252595576761	6.3521687807359495	GCCATTAAA
chr12	86134733	86134734	chr12:86134734:C:T	rs839135	C	T	T	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr12	86712408	86712409	chr12:86712409:A:T	rs11104051	A	T	T	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr12	86776598	86776599	chr12:86776599:G:A	rs10777001	G	A	G	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr12	86948952	86948953	chr12:86948953:T:A	rs66513214	T	A	A	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr12	86989342	86989343	chr12:86989343:G:A	rs148214461	G	A	G	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr12	87112867	87112868	chr12:87112868:T:C	rs73197878	T	C	T	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr12	87440637	87440638	chr12:87440638:G:A	rs75387437	G	A	G	Hoxd9.mouse_homeodomain_1	0	1	+	7.9772278588234515	7.188342824966311	GCAATAAAA
chr12	87853789	87853790	chr12:87853790:C:A	rs7972861	C	A	A	Hoxd9.mouse_homeodomain_1	2	1	+	7.212456609225008	6.510900750338196	GCCATAAAG
chr12	88058042	88058043	chr12:88058043:T:G	rs113635279	T	G	T	Hoxd9.mouse_homeodomain_1	8	1	-	8.409487817756228	6.876920192413827	CCCATTAAA
chr12	88361799	88361800	chr12:88361800:G:T	rs10858715	G	T	T	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr12	88493946	88493947	chr12:88493947:G:T	rs11104904	G	T	G	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr12	88497450	88497451	chr12:88497451:G:T	rs1873680	G	T	G	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr12	88501315	88501316	chr12:88501316:C:T	rs73199409	C	T	C	Hoxd9.mouse_homeodomain_1	8	1	+	7.1462160923678635	5.746270592944195	GCCATAAAC
chr12	88552999	88553000	chr12:88553000:G:A	rs1000788	G	A	g	Hoxd9.mouse_homeodomain_1	1	1	-	7.45645131454733	6.141649400214323	CCCATAAAC
chr12	88553009	88553010	chr12:88553010:C:T	rs1466692	C	T	T	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr12	88559314	88559315	chr12:88559315:G:C	rs7965365	G	C	G	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr12	88727380	88727381	chr12:88727381:T:G	rs1528122	T	G	G	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr12	89101851	89101852	chr12:89101852:C:G	rs7137136	C	G	G	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr12	89253986	89253987	chr12:89253987:A:G	rs11105221	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.678783717710262	7.34470511784777	GCCATAAAA
chr12	89278342	89278343	chr12:89278343:T:C	rs922350	T	C	C	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr12	89385991	89385992	chr12:89385992:T:C	rs17016790	T	C	T	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr12	89461829	89461830	chr12:89461830:T:C	rs1332721835	T	C	T	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr12	89532880	89532881	chr12:89532881:G:A	rs11105318	G	A	G	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr12	89775630	89775631	chr12:89775631:T:C	rs10858928	T	C	T	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr12	89775647	89775648	chr12:89775648:G:T	rs142416476	G	T	G	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr12	89882210	89882211	chr12:89882211:T:A	rs148730284	T	A	T	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr12	90112132	90112133	chr12:90112133:A:G	rs7965999	A	G	A	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr12	90112139	90112140	chr12:90112140:G:A	rs7966278	G	A	G	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr12	90117802	90117803	chr12:90117803:G:C	rs7486630	G	C	C	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr12	90201190	90201191	chr12:90201191:C:T	rs79471974	C	T	C	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr12	90216273	90216274	chr12:90216274:T:A	rs77022187	T	A	T	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr12	90280583	90280584	chr12:90280584:C:T	rs184987650	C	T	C	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr12	90559696	90559697	chr12:90559697:A:G	rs2520559	A	G	A	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr12	90800951	90800952	chr12:90800952:G:A	rs17251078	G	A	G	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr12	91080122	91080123	chr12:91080123:A:C	rs17018691	A	C	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.099252595576761	1.5237444913732796	GCCATTAAA
chr12	91110458	91110459	chr12:91110459:T:G	rs76656200	T	G	G	Hoxd9.mouse_homeodomain_1	7	1	-	8.409487817756228	5.520072047725641	CCCATTAAA
chr12	91171027	91171028	chr12:91171028:T:G	rs73198634	T	G	T	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr12	91175009	91175010	chr12:91175010:A:G	rs3138176	A	G	A	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr12	91181655	91181656	chr12:91181656:T:A	rs13312815	T	A	T	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr12	91219571	91219572	chr12:91219572:T:C	rs1522404	T	C	C	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr12	91219845	91219846	chr12:91219846:T:C	rs1522403	T	C	T	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr12	91275963	91275964	chr12:91275964:T:C	rs826761	T	C	T	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr12	91454421	91454422	chr12:91454422:T:A	rs1350504	T	A	A	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr12	91707059	91707060	chr12:91707060:A:C	rs61925865	A	C	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.98901893988973	2.4135108356862487	CCCATAAAA
chr12	91878829	91878830	chr12:91878830:T:C	rs11106322	T	C	T	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr12	91928781	91928782	chr12:91928782:G:A	rs4499040	G	A	G	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr12	92232193	92232194	chr12:92232194:A:T	rs117566616	A	T	A	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr12	92335912	92335913	chr12:92335913:C:T	rs381966	C	T	T	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr12	92439347	92439348	chr12:92439348:G:A	rs168089	G	A	G	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr12	92439829	92439830	chr12:92439830:A:G	rs11106552	A	G	A	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr12	93198703	93198704	chr12:93198704:C:T	rs4761746	C	T	C	Hoxd9.mouse_homeodomain_1	1	1	+	7.45645131454733	6.141649400214323	CCCATAAAC
chr12	93543603	93543604	chr12:93543604:A:G	rs112712191	A	G	A	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr12	93544112	93544113	chr12:93544113:A:G	rs73369686	A	G	A	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr12	93727537	93727538	chr12:93727538:T:C	rs12817549	T	C	T	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr12	93779905	93779906	chr12:93779906:T:A	rs7975577	T	A	A	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr12	93814122	93814123	chr12:93814123:C:A	chr12:93814123:C:A	C	A	C	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr12	93852674	93852675	chr12:93852675:T:C	rs10777547	T	C	T	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr12	93852691	93852692	chr12:93852692:T:A	rs12298457	T	A	T	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr12	93854761	93854762	chr12:93854762:T:C	rs17021633	T	C	C	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr12	93954722	93954723	chr12:93954723:T:G	rs148187609	T	G	T	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr12	93965138	93965139	chr12:93965139:G:A	rs113944618	G	A	G	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr12	93965160	93965161	chr12:93965161:G:A	rs34808005	G	A	G	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr12	94034014	94034015	chr12:94034015:A:T	rs4761549	A	T	A	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr12	94034021	94034022	chr12:94034022:T:G	rs4761550	T	G	T	Hoxd9.mouse_homeodomain_1	2	1	-	8.287463081002919	8.98901893988973	CCAATAAAA
chr12	94200860	94200861	chr12:94200861:A:G	rs10859685	A	G	G	Hoxd9.mouse_homeodomain_1	4	1	-	8.027213970992095	5.372167326129518	CACATAAAA
chr12	94242611	94242612	chr12:94242612:T:A	rs1994208	T	A	A	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr12	94297779	94297780	chr12:94297780:G:A	rs35129588	G	A	A	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr12	94558859	94558860	chr12:94558860:G:T	rs11107601	G	T	G	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr12	94675135	94675136	chr12:94675136:C:T	rs7959596	C	T	C	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr12	94769257	94769258	chr12:94769258:T:G	rs10777615	T	G	G	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr12	94955682	94955683	chr12:94955683:G:A	rs1834611	G	A	G	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr12	95147425	95147426	chr12:95147426:C:T	rs55703445	C	T	C	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr12	95354550	95354551	chr12:95354551:T:C	rs12830943	T	C	T	Hoxd9.mouse_homeodomain_1	4	1	+	7.889898683853121	5.234852038990543	ACCATAAAA
chr12	95425147	95425148	chr12:95425148:C:T	rs2658714	C	T	C	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr12	95552306	95552307	chr12:95552307:G:A	rs12099663	G	A	G	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr12	95633690	95633691	chr12:95633691:C:T	rs11836367	C	T	C	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr12	95649635	95649636	chr12:95649636:G:T	rs115792768	G	T	G	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr12	95774626	95774627	chr12:95774627:G:A	rs4533108	G	A	G	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr12	96351094	96351095	chr12:96351095:T:C	rs73229022	T	C	T	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr12	96401502	96401503	chr12:96401503:G:A	rs115570851	G	A	g	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr12	96401504	96401505	chr12:96401505:T:G	rs79997415	T	G	T	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr12	96473392	96473393	chr12:96473393:A:C	rs10860042	A	C	A	Hoxd9.mouse_homeodomain_1	7	1	+	7.9772278588234515	5.087812088792866	GCAATAAAA
chr12	96489808	96489809	chr12:96489809:C:T	rs555535124	C	T	C	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr12	96493479	96493480	chr12:96493480:A:G	rs79887017	A	G	A	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr12	96493523	96493524	chr12:96493524:G:T	rs76363313	G	T	G	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr12	96515524	96515525	chr12:96515525:G:T	rs61940395	G	T	G	Hoxd9.mouse_homeodomain_1	5	1	-	7.091711387329735	8.98901893988973	CCCATCAAA
chr12	96908202	96908203	chr12:96908203:A:G	rs11108734	A	G	A	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr12	97378222	97378223	chr12:97378223:G:A	rs73238059	G	A	g	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr12	97642962	97642963	chr12:97642963:C:T	rs117317827	C	T	C	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr12	97666417	97666418	chr12:97666418:C:T	rs34541	C	T	C	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr12	97955121	97955122	chr12:97955122:T:C	rs9888425	T	C	T	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr12	98127699	98127700	chr12:98127700:C:A	rs1838376	C	A	C	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr12	98408704	98408705	chr12:98408705:G:A	rs1035583763	G	A	G	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr12	98485721	98485722	chr12:98485722:C:G	rs829884	C	G	G	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr12	98587866	98587867	chr12:98587867:A:C	rs36031841	A	C	c	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr12	98763744	98763745	chr12:98763745:T:C	rs1862022	T	C	C	Hoxd9.mouse_homeodomain_1	8	1	-	8.027213970992095	6.560886862506841	CACATAAAA
chr12	98816767	98816768	chr12:98816768:C:T	rs201425	C	T	T	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr12	99752889	99752890	chr12:99752890:G:T	rs6538936	G	T	T	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr12	99915599	99915600	chr12:99915600:A:C	rs61193188	A	C	A	Hoxd9.mouse_homeodomain_1	8	1	+	8.099252595576761	6.566684970234361	GCCATTAAA
chr12	100484841	100484842	chr12:100484842:C:T	rs75048576	C	T	C	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr12	100549854	100549855	chr12:100549855:T:C	rs187977023	T	C	T	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr12	100829881	100829882	chr12:100829882:T:C	rs11110540	T	C	T	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr12	100842301	100842302	chr12:100842302:T:C	rs182487040	T	C	T	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr12	101010584	101010585	chr12:101010585:G:A	rs60715723	G	A	G	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr12	101041182	101041183	chr12:101041183:A:G	rs7957254	A	G	A	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr12	101414516	101414517	chr12:101414517:A:C	rs17031408	A	C	A	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr12	101467695	101467696	chr12:101467696:G:A	rs146206414	G	A	G	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr12	101686141	101686142	chr12:101686142:C:T	rs2241555	C	T	T	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr12	101686143	101686144	chr12:101686144:T:C	rs2241554	T	C	T	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr12	101690931	101690932	chr12:101690932:C:G	rs2559864	C	G	C	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr12	101695782	101695783	chr12:101695783:A:G	rs2559856	A	G	A	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr12	101745706	101745707	chr12:101745707:T:C	rs10219650	T	C	T	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr12	101928156	101928157	chr12:101928157:G:A	rs4622329	G	A	G	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr12	101945580	101945581	chr12:101945581:G:A	rs117081218	G	A	G	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr12	101996095	101996096	chr12:101996096:A:C	rs180988730	A	C	A	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr12	102363334	102363335	chr12:102363335:A:G	rs4764695	A	G	G	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr12	102408606	102408607	chr12:102408607:C:T	rs17884734	C	T	C	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr12	102438806	102438807	chr12:102438807:T:C	rs116231652	T	C	G	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr12	102483307	102483308	chr12:102483308:C:G	rs12579077	C	G	C	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr12	102504263	102504264	chr12:102504264:C:G	rs4764892	C	G	C	Hoxd9.mouse_homeodomain_1	0	1	+	7.091711387329735	6.781476165150267	CCCATCAAA
chr12	102564040	102564041	chr12:102564041:A:C	rs855206	A	C	C	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr12	102564346	102564347	chr12:102564347:T:C	rs753480	T	C	T	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr12	102918840	102918841	chr12:102918841:C:A	rs7485331	C	A	C	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr12	103548775	103548776	chr12:103548776:T:G	rs4531575	T	G	G	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr12	103548777	103548778	chr12:103548778:A:T	rs4405408	A	T	T	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr12	103627484	103627485	chr12:103627485:G:A	rs703618	G	A	G	Hoxd9.mouse_homeodomain_1	2	1	-	8.027213970992095	1.5397735133684596	CACATAAAA
chr12	103632996	103632997	chr12:103632997:C:T	rs1588888	C	T	C	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr12	103775577	103775578	chr12:103775578:C:T	rs10861096	C	T	C	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr12	103902997	103902998	chr12:103902998:T:C	rs878126	T	C	T	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr12	103957553	103957554	chr12:103957554:C:G	rs73177939	C	G	C	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr12	104078917	104078918	chr12:104078918:C:A	rs115967439	C	A	C	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr12	104182916	104182917	chr12:104182917:A:G	rs6539127	A	G	A	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr12	104358627	104358628	chr12:104358628:C:T	rs556393309	C	T	C	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr12	104468832	104468833	chr12:104468833:G:A	rs10746001	G	A	A	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr12	104581430	104581431	chr12:104581431:G:A	rs167510	G	A	A	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr12	104673948	104673949	chr12:104673949:C:G	rs703665	C	G	C	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr12	104673969	104673970	chr12:104673970:T:C	rs703666	T	C	C	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr12	104685107	104685108	chr12:104685108:A:G	rs771544116	A	G	A	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr12	104751393	104751394	chr12:104751394:G:T	rs2468109	G	T	g	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr12	104765047	104765048	chr12:104765048:C:T	rs7301525	C	T	C	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr12	104957485	104957486	chr12:104957486:A:G	rs576091141	A	G	A	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr12	105018916	105018917	chr12:105018917:C:T	rs7958263	C	T	C	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr12	105064478	105064479	chr12:105064479:G:A	rs17242777	G	A	G	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr12	105390670	105390671	chr12:105390671:A:G	rs12820743	A	G	G	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr12	105443319	105443320	chr12:105443320:G:T	rs2888847	G	T	T	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr12	105554538	105554539	chr12:105554539:G:T	rs112413038	G	T	G	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr12	105554552	105554553	chr12:105554553:A:C	rs4964384	A	C	A	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr12	105554555	105554556	chr12:105554556:A:G	rs77831710	A	G	A	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr12	105705504	105705505	chr12:105705505:C:G	rs73186037	C	G	C	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr12	106033398	106033399	chr12:106033399:A:G	rs73193813	A	G	A	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr12	106042740	106042741	chr12:106042741:A:C	rs2468197	A	C	A	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr12	106077475	106077476	chr12:106077476:T:C	rs736787	T	C	T	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr12	106086671	106086672	chr12:106086672:A:G	rs2251027	A	G	A	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr12	106100566	106100567	chr12:106100567:G:A	rs1896364	G	A	G	Hoxd9.mouse_homeodomain_1	1	1	-	8.099252595576761	6.784450681243753	GCCATTAAA
chr12	106911670	106911671	chr12:106911671:G:C	rs117059829	G	C	G	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr12	106985066	106985067	chr12:106985067:A:G	rs714359	A	G	G	Hoxd9.mouse_homeodomain_1	3	1	+	7.241935125048919	5.907856525186427	CCCATACAA
chr12	107514294	107514295	chr12:107514295:T:A	rs11113361	T	A	T	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr12	107568126	107568127	chr12:107568127:G:A	rs7963848	G	A	G	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr12	107587524	107587525	chr12:107587525:G:A	rs35608147	G	A	G	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr12	107607906	107607907	chr12:107607907:A:C	rs570555916	A	C	A	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr12	107645902	107645903	chr12:107645903:G:A	rs189323587	G	A	A	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr12	108270396	108270397	chr12:108270397:A:G	rs1426348	A	G	G	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr12	108272114	108272115	chr12:108272115:G:A	rs151328906	G	A	g	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr12	108329040	108329041	chr12:108329041:G:A	rs7300846	G	A	G	Hoxd9.mouse_homeodomain_1	2	1	-	7.45645131454733	0.9690108569236928	CCCATAAAC
chr12	108349312	108349313	chr12:108349313:C:T	rs17040435	C	T	C	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr12	108557863	108557864	chr12:108557864:A:T	rs2241317	A	T	T	Hoxd9.mouse_homeodomain_1	0	1	+	7.889898683853121	7.094471634580788	ACCATAAAA
chr12	108558294	108558295	chr12:108558295:A:C	rs12299269	A	C	A	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr12	108567129	108567130	chr12:108567130:G:T	rs10861945	G	T	T	Hoxd9.mouse_homeodomain_1	0	1	-	8.287463081002919	7.188342824966311	CCAATAAAA
chr12	108727918	108727919	chr12:108727919:G:A	rs11114039	G	A	G	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr12	108904798	108904799	chr12:108904799:C:T	chr12:108904799:C:T	C	T	G	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr12	109131752	109131753	chr12:109131753:A:G	rs927851480	A	G	A	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr12	109137385	109137386	chr12:109137386:A:G	rs1654885	A	G	G	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr12	109307930	109307931	chr12:109307931:G:A	rs35099849	G	A	G	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr12	109386188	109386189	chr12:109386189:G:C	rs76682741	G	C	G	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr12	109403070	109403071	chr12:109403071:G:C	rs9943699	G	C	G	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr12	109443760	109443761	chr12:109443761:G:A	rs182056991	G	A	G	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr12	109463773	109463774	chr12:109463774:C:T	rs61941582	C	T	C	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr12	109463815	109463816	chr12:109463816:C:T	rs34737994	C	T	C	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr12	109523316	109523317	chr12:109523317:C:T	rs56330650	C	T	C	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr12	109573562	109573563	chr12:109573563:A:G	rs560451620	A	G	A	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr12	109617824	109617825	chr12:109617825:A:T	rs118111163	A	T	a	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr12	109621693	109621694	chr12:109621694:A:G	rs7968544	A	G	A	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr12	109838273	109838274	chr12:109838274:A:T	rs7139451	A	T	T	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr12	110101357	110101358	chr12:110101358:A:C	rs11065030	A	C	A	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr12	110215079	110215080	chr12:110215080:C:G	rs116674159	C	G	C	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr12	110314555	110314556	chr12:110314556:G:A	rs1266763883	G	A	G	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr12	110408035	110408036	chr12:110408036:T:G	rs1011260632	T	G	t	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr12	110469445	110469446	chr12:110469446:T:C	rs762366689	T	C	T	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr12	110585296	110585297	chr12:110585297:A:C	rs145024701	A	C	A	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr12	110598244	110598245	chr12:110598245:T:C	rs74600568	T	C	T	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr12	110737126	110737127	chr12:110737127:T:C	rs79397529	T	C	T	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr12	110742995	110742996	chr12:110742996:G:A	rs1019226475	G	A	G	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr12	110743001	110743002	chr12:110743002:G:A	chr12:110743002:G:A	G	A	G	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr12	110916818	110916819	chr12:110916819:C:T	rs61943010	C	T	C	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr12	111860452	111860453	chr12:111860453:A:G	rs876896	A	G	A	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr12	112263921	112263922	chr12:112263922:T:C	rs7310858	T	C	c	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr12	112530801	112530802	chr12:112530802:G:T	rs757268	G	T	g	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr12	112607872	112607873	chr12:112607873:G:A	rs79790736	G	A	G	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr12	112895434	112895435	chr12:112895435:A:G	rs10774668	A	G	A	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr12	112926526	112926527	chr12:112926527:A:G	rs4766666	A	G	G	Hoxd9.mouse_homeodomain_1	3	1	+	8.678783717710262	7.34470511784777	GCCATAAAA
chr12	112974065	112974066	chr12:112974066:T:C	rs12818640	T	C	T	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr12	112981044	112981045	chr12:112981045:G:C	rs1298962	G	C	C	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr12	113048733	113048734	chr12:113048734:A:G	rs149188413	A	G	A	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr12	113048735	113048736	chr12:113048736:G:T	rs11614869	G	T	G	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr12	113051739	113051740	chr12:113051740:G:A	rs55798985	G	A	A	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr12	113198459	113198460	chr12:113198460:G:A	rs61941452	G	A	A	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr12	113565409	113565410	chr12:113565410:C:T	rs115535276	C	T	C	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr12	113701866	113701867	chr12:113701867:G:A	rs35845130	G	A	G	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr12	113725089	113725090	chr12:113725090:C:T	rs11066708	C	T	C	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr12	113737047	113737048	chr12:113737048:G:A	rs73203080	G	A	G	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr12	113782051	113782052	chr12:113782052:A:G	rs10850202	A	G	A	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr12	113819829	113819830	chr12:113819830:T:C	rs4767135	T	C	C	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr12	113888476	113888477	chr12:113888477:A:G	rs59392591	A	G	G	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr12	114666684	114666685	chr12:114666685:G:A	rs514849	G	A	G	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr12	114694241	114694242	chr12:114694242:A:G	rs10735084	A	G	A	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr12	114913975	114913976	chr12:114913976:C:T	rs1896348	C	T	C	Hoxd9.mouse_homeodomain_1	1	1	+	7.241935125048919	5.927133210715912	CCCATACAA
chr12	114913988	114913989	chr12:114913989:G:T	rs1896347	G	T	T	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr12	114934152	114934153	chr12:114934153:T:C	rs7966651	T	C	C	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr12	115156060	115156061	chr12:115156061:T:C	rs10454501	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.287463081002919	6.953384481140425	CCAATAAAA
chr12	115170258	115170259	chr12:115170259:G:A	rs35351	G	A	G	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr12	115182151	115182152	chr12:115182152:C:T	rs118097042	C	T	C	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr12	115370879	115370880	chr12:115370880:T:C	rs73406190	T	C	T	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr12	115475019	115475020	chr12:115475020:G:A	rs16945598	G	A	G	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr12	115632299	115632300	chr12:115632300:C:T	rs1965295	C	T	T	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr12	115632317	115632318	chr12:115632318:T:C	rs73210766	T	C	T	Hoxd9.mouse_homeodomain_1	5	1	-	8.287463081002919	1.9132733627563638	CCAATAAAA
chr12	115694206	115694207	chr12:115694207:T:G	rs7300795	T	G	G	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr12	115822998	115822999	chr12:115822999:A:G	rs80338611	A	G	A	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr12	115947283	115947284	chr12:115947284:T:C	rs11067859	T	C	T	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr12	116118969	116118970	chr12:116118970:A:G	rs56350518	A	G	G	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr12	116294207	116294208	chr12:116294208:T:C	rs540553672	T	C	T	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr12	116406694	116406695	chr12:116406695:G:A	rs191523733	G	A	G	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr12	116508601	116508602	chr12:116508602:A:G	rs147761926	A	G	A	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr12	116518883	116518884	chr12:116518884:C:T	rs35812967	C	T	C	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr12	116632036	116632037	chr12:116632037:T:C	rs116090061	T	C	C	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr12	116698782	116698783	chr12:116698783:T:A	chr12:116698783:T:A	T	A	T	Hoxd9.mouse_homeodomain_1	6	1	-	8.287463081002919	5.398047310972334	CCAATAAAA
chr12	116733863	116733864	chr12:116733864:T:C	rs2101869	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.522691831404475	6.188613231541982	CCCATAAAG
chr12	116736448	116736449	chr12:116736449:C:T	rs117059383	C	T	C	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr12	117012682	117012683	chr12:117012683:A:T	rs7977598	A	T	T	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr12	117031808	117031809	chr12:117031809:A:G	rs72487544	A	G	A	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr12	117127475	117127476	chr12:117127476:G:T	rs6490111	G	T	t	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr12	117641722	117641723	chr12:117641723:A:G	rs7965878	A	G	G	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr12	117696150	117696151	chr12:117696151:A:G	rs634264	A	G	G	Hoxd9.mouse_homeodomain_1	0	1	+	7.889898683853121	8.678783717710262	ACCATAAAA
chr12	118138804	118138805	chr12:118138805:T:C	rs7977921	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.287463081002919	6.953384481140425	CCAATAAAA
chr12	118246343	118246344	chr12:118246344:C:T	rs773161263	C	T	C	Hoxd9.mouse_homeodomain_1	2	1	+	6.943160709270972	0.4557202516473358	CCCATTAAG
chr12	118271506	118271507	chr12:118271507:G:A	rs112725005	G	A	G	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr12	118385428	118385429	chr12:118385429:T:C	rs2062525	T	C	T	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr12	118546784	118546785	chr12:118546785:C:T	rs12368753	C	T	c	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr12	118553514	118553515	chr12:118553515:A:G	rs77915398	A	G	A	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr12	118712613	118712614	chr12:118712614:T:C	rs2682739	T	C	C	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr12	119003406	119003407	chr12:119003407:C:T	rs2393465	C	T	T	Hoxd9.mouse_homeodomain_1	2	1	+	8.678783717710262	2.1913432600866263	GCCATAAAA
chr12	119101350	119101351	chr12:119101351:C:T	rs35837876	C	T	c	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr12	119235377	119235378	chr12:119235378:C:T	rs11064722	C	T	C	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr12	119302722	119302723	chr12:119302723:G:T	rs10849644	G	T	G	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr12	119407756	119407757	chr12:119407757:C:T	rs7301881	C	T	T	Hoxd9.mouse_homeodomain_1	2	1	+	8.98901893988973	2.5015784822660927	CCCATAAAA
chr12	119501619	119501620	chr12:119501620:C:A	rs1716441	C	A	A	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr12	119670401	119670402	chr12:119670402:C:G	rs56164735	C	G	C	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr12	120011755	120011756	chr12:120011756:A:G	rs10849735	A	G	A	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr12	120257337	120257338	chr12:120257338:T:C	rs1151832	T	C	C	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr12	120290844	120290845	chr12:120290845:G:A	rs76977338	G	A	G	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr12	120290877	120290878	chr12:120290878:C:T	rs751756490	C	T	c	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr12	120488515	120488516	chr12:120488516:C:G	rs787820	C	G	G	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr12	120756823	120756824	chr12:120756824:T:C	rs11065253	T	C	T	Hoxd9.mouse_homeodomain_1	7	1	-	8.678783717710262	1.9749577711185315	GCCATAAAA
chr12	120902995	120902996	chr12:120902996:T:C	rs1105416	T	C	T	Hoxd9.mouse_homeodomain_1	4	1	+	7.45645131454733	4.801404669684752	CCCATAAAC
chr12	120906770	120906771	chr12:120906771:A:T	rs61946382	A	T	A	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr12	121095210	121095211	chr12:121095211:A:G	rs1180010	A	G	A	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr12	121108545	121108546	chr12:121108546:G:A	rs589384	G	A	G	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr12	121214237	121214238	chr12:121214238:G:T	rs930186	G	T	T	Hoxd9.mouse_homeodomain_1	2	1	-	8.98901893988973	8.287463081002919	CCCATAAAA
chr12	121215574	121215575	chr12:121215575:C:A	rs78000028	C	A	C	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr12	121218166	121218167	chr12:121218167:A:T	rs1182945	A	T	A	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr12	121351756	121351757	chr12:121351757:C:A	rs1622534	C	A	C	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr12	121777673	121777674	chr12:121777674:C:T	rs117719462	C	T	C	Hoxd9.mouse_homeodomain_1	8	1	-	7.522691831404475	8.98901893988973	CCCATAAAG
chr12	122013371	122013372	chr12:122013372:G:A	rs12827200	G	A	G	Hoxd9.mouse_homeodomain_1	2	1	-	8.409487817756228	1.922047360132591	CCCATTAAA
chr12	122052771	122052772	chr12:122052772:T:A	rs10770189	T	A	T	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr12	122069600	122069601	chr12:122069601:T:C	rs61952904	T	C	-	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr12	122310137	122310138	chr12:122310138:A:C	rs12425684	A	C	A	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr12	122669277	122669278	chr12:122669278:C:T	rs6489190	C	T	C	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr12	123030814	123030815	chr12:123030815:G:A	rs73411057	G	A	G	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr12	123140580	123140581	chr12:123140581:C:G	rs144786252	C	G	C	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr12	123172177	123172178	chr12:123172178:G:T	rs1790100	G	T	t	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr12	123428885	123428886	chr12:123428886:A:G	rs4930718	A	G	A	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr12	123534824	123534825	chr12:123534825:A:T	rs779078086	A	T	A	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr12	123706100	123706101	chr12:123706101:G:A	rs58680194	G	A	G	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr12	124015334	124015335	chr12:124015335:C:T	rs3767	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	-	7.716978748812629	6.928093714955487	GACATAAAA
chr12	124021856	124021857	chr12:124021857:C:T	rs56962716	C	T	C	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr12	124106106	124106107	chr12:124106107:G:C	rs1985823	G	C	G	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr12	124152602	124152603	chr12:124152603:A:C	rs10846611	A	C	A	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr12	124260076	124260077	chr12:124260077:T:G	rs7966873	T	G	G	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr12	124260079	124260080	chr12:124260080:A:G	rs78626151	A	G	A	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr12	124472005	124472006	chr12:124472006:C:T	rs1243733	C	T	C	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr12	124528081	124528082	chr12:124528082:C:T	rs76670309	C	T	C	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr12	124719229	124719230	chr12:124719230:C:T	rs58908512	C	T	C	Hoxd9.mouse_homeodomain_1	3	1	-	7.34470511784777	8.678783717710262	GCCGTAAAA
chr12	124728911	124728912	chr12:124728912:C:A	rs61933404	C	A	A	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr12	124756306	124756307	chr12:124756307:G:A	rs2085438	G	A	A	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr12	124756327	124756328	chr12:124756328:A:G	rs140135592	A	G	A	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr12	124776098	124776099	chr12:124776099:A:G	rs838878	A	G	G	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr12	124827891	124827892	chr12:124827892:A:C	chr12:124827892:A:C	A	C	A	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr12	124833808	124833809	chr12:124833809:G:A	rs373372716	G	A	G	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr12	124898493	124898494	chr12:124898494:T:C	rs7308593	T	C	T	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr12	124927427	124927428	chr12:124927428:A:G	rs117025451	A	G	A	Hoxd9.mouse_homeodomain_1	8	1	+	8.98901893988973	7.522691831404475	CCCATAAAA
chr12	124927433	124927434	chr12:124927434:T:A	rs56750915	T	A	t	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr12	124927434	124927435	chr12:124927435:C:T	rs79462111	C	T	C	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr12	124927442	124927443	chr12:124927443:G:A	rs150164286	G	A	G	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr12	124939442	124939443	chr12:124939443:T:C	rs146150860	T	C	T	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr12	125080035	125080036	chr12:125080036:A:C	rs775932579	A	C	A	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr12	125124444	125124445	chr12:125124445:C:T	rs118099322	C	T	C	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr12	125256474	125256475	chr12:125256475:C:A	rs4082124	C	A	C	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr12	125290927	125290928	chr12:125290928:T:C	rs4765036	T	C	T	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr12	125312202	125312203	chr12:125312203:G:A	rs34515519	G	A	G	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr12	125432744	125432745	chr12:125432745:C:T	rs79411961	C	T	C	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr12	125734443	125734444	chr12:125734444:A:C	rs75414221	A	C	A	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr12	125989729	125989730	chr12:125989730:G:A	rs7953540	G	A	A	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr12	126452005	126452006	chr12:126452006:C:T	rs4765384	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	+	7.522691831404475	5.628144526095533	CCCATAAAG
chr12	126831681	126831682	chr12:126831682:G:A	rs35076451	G	A	A	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr12	126907278	126907279	chr12:126907279:C:T	rs918134	C	T	c	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr12	127053060	127053061	chr12:127053061:C:T	rs146698918	C	T	C	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr12	127118502	127118503	chr12:127118503:A:G	rs12306064	A	G	A	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr12	127128025	127128026	chr12:127128026:T:C	rs12581593	T	C	T	Hoxd9.mouse_homeodomain_1	4	1	+	7.241935125048919	4.5868884801863405	CCCATACAA
chr12	127175049	127175050	chr12:127175050:T:C	rs74997126	T	C	T	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr12	127289793	127289794	chr12:127289794:T:C	rs10744302	T	C	C	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr12	127366663	127366664	chr12:127366664:A:C	rs1385995	A	C	A	Hoxd9.mouse_homeodomain_1	4	1	-	8.678783717710262	1.8369652703796566	GCCATAAAA
chr12	127430921	127430922	chr12:127430922:A:G	rs3847768	A	G	G	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr12	127449033	127449034	chr12:127449034:C:T	rs12812963	C	T	C	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr12	127478004	127478005	chr12:127478005:A:T	rs11059160	A	T	A	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr12	127550430	127550431	chr12:127550431:G:A	rs140254094	G	A	G	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr12	127550436	127550437	chr12:127550437:C:A	rs73240313	C	A	C	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr12	127637587	127637588	chr12:127637588:G:T	rs61940429	G	T	G	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr12	127680778	127680779	chr12:127680779:C:G	rs28608694	C	G	G	Hoxd9.mouse_homeodomain_1	0	1	-	8.678783717710262	8.98901893988973	GCCATAAAA
chr12	127771675	127771676	chr12:127771676:A:G	rs75767392	A	G	A	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr12	127984887	127984888	chr12:127984888:T:C	rs7309559	T	C	t	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr12	128032338	128032339	chr12:128032339:G:A	rs4761056	G	A	A	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr12	128066230	128066231	chr12:128066231:A:G	rs11059473	A	G	A	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr12	128089255	128089256	chr12:128089256:A:G	rs34020142	A	G	A	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr12	128224687	128224688	chr12:128224688:G:C	rs11059587	G	C	G	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr12	128382092	128382093	chr12:128382093:C:G	rs147691344	C	G	C	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr12	128550042	128550043	chr12:128550043:C:G	rs7316561	C	G	C	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr12	128582246	128582247	chr12:128582247:A:G	rs1489418	A	G	A	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr12	128666119	128666120	chr12:128666120:C:A	rs12229797	C	A	C	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr12	128719237	128719238	chr12:128719238:T:C	rs56900718	T	C	C	Hoxd9.mouse_homeodomain_1	3	1	-	8.678783717710262	7.34470511784777	GCCATAAAA
chr12	128836244	128836245	chr12:128836245:C:A	rs143660076	C	A	C	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr12	128849912	128849913	chr12:128849913:A:G	rs112231906	A	G	A	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr12	128856057	128856058	chr12:128856058:G:A	rs74761571	G	A	G	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr12	128856058	128856059	chr12:128856059:T:C	rs518767	T	C	C	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr12	129592643	129592644	chr12:129592644:A:C	rs1681688	A	C	C	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr12	129906195	129906196	chr12:129906196:G:A	rs11060610	G	A	G	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr12	130011950	130011951	chr12:130011951:G:T	rs10773725	G	T	G	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr12	130037298	130037299	chr12:130037299:T:C	rs598653	T	C	C	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr12	130086417	130086418	chr12:130086418:A:G	rs76519802	A	G	a	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr12	130086427	130086428	chr12:130086428:C:T	rs61939338	C	T	c	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr12	130086440	130086441	chr12:130086441:G:T	rs79777049	G	T	t	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr12	130088041	130088042	chr12:130088042:G:A	rs61939340	G	A	g	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr12	130139260	130139261	chr12:130139261:T:G	rs6486524	T	G	T	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr12	130161957	130161958	chr12:130161958:T:G	rs11060752	T	G	T	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr12	130335727	130335728	chr12:130335728:T:G	chr12:130335728:T:G	T	G	t	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr12	130391383	130391384	chr12:130391384:A:G	rs6486537	A	G	G	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr12	130606378	130606379	chr12:130606379:T:C	rs11061026	T	C	C	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr12	130989162	130989163	chr12:130989163:G:T	rs35709469	G	T	T	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr12	130989168	130989169	chr12:130989169:T:C	rs36077382	T	C	T	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr12	131197995	131197996	chr12:131197996:A:C	rs12296195	A	C	A	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr12	131227189	131227190	chr12:131227190:T:C	rs150238727	T	C	t	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr12	131261268	131261269	chr12:131261269:C:T	rs4474529	C	T	C	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr12	131265751	131265752	chr12:131265752:G:A	rs150588670	G	A	G	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr12	131265783	131265784	chr12:131265784:C:G	rs61938691	C	G	c	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr12	131265813	131265814	chr12:131265814:C:T	rs7968341	C	T	c	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr12	131371978	131371979	chr12:131371979:A:T	rs59167462	A	T	A	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr12	131409259	131409260	chr12:131409260:A:G	rs11061514	A	G	A	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr12	131459290	131459291	chr12:131459291:C:T	rs1527019	C	T	c	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr12	131515051	131515052	chr12:131515052:T:C	rs11061587	T	C	T	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr12	131515075	131515076	chr12:131515076:T:G	rs11061588	T	G	C	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr12	131515089	131515090	chr12:131515090:T:C	rs2398557	T	C	T	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr12	131575829	131575830	chr12:131575830:G:A	rs12810264	G	A	G	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr12	132368982	132368983	chr12:132368983:G:A	rs28454368	G	A	G	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr12	132609310	132609311	chr12:132609311:T:C	rs2323970	T	C	t	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr12	132886499	132886500	chr12:132886500:C:A	rs7136785	C	A	T	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr12	132954030	132954031	chr12:132954031:C:T	rs986770695	C	T	C	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr12	132973902	132973903	chr12:132973903:T:A	rs2873191	T	A	A	Hoxd9.mouse_homeodomain_1	3	1	-	7.1462160923678635	5.142734955559218	GCCATAAAC
chr12	133115742	133115743	chr12:133115743:T:C	rs12422899	T	C	C	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr13	16008314	16008315	chr13:16008315:G:A	chr13:16008315:G:A	G	A	.	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr13	16234920	16234921	chr13:16234921:T:C	rs1320357823	T	C	.	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr13	17156732	17156733	chr13:17156733:G:A	rs1432553968	G	A	.	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr13	17156735	17156736	chr13:17156736:T:A	chr13:17156736:T:A	T	A	.	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr13	17156741	17156742	chr13:17156742:C:A	chr13:17156742:C:A	C	A	.	Hoxd9.mouse_homeodomain_1	0	1	+	8.98901893988973	7.889898683853121	CCCATAAAA
chr13	17243892	17243893	chr13:17243893:A:T	rs1321113459	A	T	.	Hoxd9.mouse_homeodomain_1	3	1	+	8.98901893988973	6.985537803081085	CCCATAAAA
chr13	17519900	17519901	chr13:17519901:G:A	chr13:17519901:G:A	G	A	.	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr13	17533523	17533524	chr13:17533524:G:C	rs1410735629	G	C	.	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr13	17742958	17742959	chr13:17742959:G:C	rs1283831780	G	C	.	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr13	17765045	17765046	chr13:17765046:G:A	rs1373612472	G	A	.	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr13	17765048	17765049	chr13:17765049:A:T	rs1175426983	A	T	.	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr13	17864410	17864411	chr13:17864411:G:T	rs1195730125	G	T	.	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr13	17879563	17879564	chr13:17879564:A:G	rs1373006434	A	G	.	Hoxd9.mouse_homeodomain_1	7	1	+	8.98901893988973	2.285192993297999	CCCATAAAA
chr13	19070332	19070333	chr13:19070333:T:C	rs7986214	T	C	C	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr13	19084344	19084345	chr13:19084345:A:C	rs183399813	A	C	A	Hoxd9.mouse_homeodomain_1	8	1	+	7.654940340027237	6.122372714684838	CCCGTAAAA
chr13	19110872	19110873	chr13:19110873:A:G	rs60129707	A	G	A	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr13	19371577	19371578	chr13:19371578:T:C	rs945611	T	C	t	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr13	20254250	20254251	chr13:20254251:A:G	rs74038242	A	G	a	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr13	20254263	20254264	chr13:20254264:G:A	rs74038243	G	A	A	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr13	20303697	20303698	chr13:20303698:A:G	rs7323752	A	G	A	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr13	20332144	20332145	chr13:20332145:A:G	rs11616847	A	G	G	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr13	20332184	20332185	chr13:20332185:T:C	rs61951132	T	C	T	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr13	20370203	20370204	chr13:20370204:A:C	rs4770014	A	C	A	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr13	20402995	20402996	chr13:20402996:C:A	rs58382370	C	A	C	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr13	20493801	20493802	chr13:20493802:G:A	rs9552210	G	A	G	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr13	20685228	20685229	chr13:20685229:A:T	rs7333838	A	T	T	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr13	21014494	21014495	chr13:21014495:G:A	rs374653974	G	A	G	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr13	21134220	21134221	chr13:21134221:C:A	chr13:21134221:C:A	C	A	C	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr13	21134244	21134245	chr13:21134245:T:C	rs61454682	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.678783717710262	7.34470511784777	GCCATAAAA
chr13	21950019	21950020	chr13:21950020:G:A	rs2320604	G	A	G	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr13	21950023	21950024	chr13:21950024:C:A	rs3129660	C	A	A	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr13	21980737	21980738	chr13:21980738:G:A	rs9506766	G	A	A	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr13	22049389	22049390	chr13:22049390:T:G	rs9509983	T	G	T	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr13	22596296	22596297	chr13:22596297:A:C	rs1360294552	A	C	A	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr13	22776904	22776905	chr13:22776905:G:A	rs9510327	G	A	g	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr13	22827974	22827975	chr13:22827975:T:C	rs7993362	T	C	C	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr13	22828788	22828789	chr13:22828789:A:G	rs1576605	A	G	a	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr13	22891982	22891983	chr13:22891983:A:C	rs7318592	A	C	C	Hoxd9.mouse_homeodomain_1	5	1	-	8.099252595576761	2.304593999463707	GCCATTAAA
chr13	22923363	22923364	chr13:22923364:G:C	rs112664049	G	C	G	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr13	22923387	22923388	chr13:22923388:G:A	rs111783560	G	A	G	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr13	23010545	23010546	chr13:23010546:A:G	rs75683941	A	G	A	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr13	23039050	23039051	chr13:23039051:A:G	rs9578529	A	G	G	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr13	23146180	23146181	chr13:23146181:C:G	rs10047693	C	G	C	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr13	23274716	23274717	chr13:23274717:C:T	rs9552906	C	T	C	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr13	23288997	23288998	chr13:23288998:G:T	rs17316242	G	T	G	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr13	23399873	23399874	chr13:23399874:A:C	rs964839183	A	C	A	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr13	23399893	23399894	chr13:23399894:G:A	rs4770441	G	A	G	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr13	23552207	23552208	chr13:23552208:A:T	rs9510771	A	T	T	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr13	23658988	23658989	chr13:23658989:C:T	rs989595478	C	T	C	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr13	23668661	23668662	chr13:23668662:A:G	rs7329483	A	G	G	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr13	24050799	24050800	chr13:24050800:A:G	rs4769314	A	G	G	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr13	24130587	24130588	chr13:24130588:A:G	rs117017717	A	G	A	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr13	24218775	24218776	chr13:24218776:A:C	rs76521322	A	C	A	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr13	24221350	24221351	chr13:24221351:G:A	rs715921	G	A	G	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr13	24250595	24250596	chr13:24250596:A:G	rs2146685	A	G	A	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr13	24697295	24697296	chr13:24697296:T:C	rs1160226	T	C	C	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr13	24800699	24800700	chr13:24800700:C:T	rs79239540	C	T	C	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr13	25233031	25233032	chr13:25233032:C:A	rs73481524	C	A	C	Hoxd9.mouse_homeodomain_1	0	1	+	8.409487817756228	7.3103675617196195	CCCATTAAA
chr13	25490009	25490010	chr13:25490010:T:C	rs7320729	T	C	C	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr13	25654611	25654612	chr13:25654612:A:G	rs17680098	A	G	A	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr13	25683419	25683420	chr13:25683420:G:A	rs34109650	G	A	G	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr13	25953365	25953366	chr13:25953366:G:T	rs118135818	G	T	G	Hoxd9.mouse_homeodomain_1	1	1	-	7.522691831404475	6.560886862506841	CCCATAAAG
chr13	25989295	25989296	chr13:25989296:A:C	rs141276447	A	C	A	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr13	26221325	26221326	chr13:26221326:C:A	rs11558132	C	A	c	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr13	26221456	26221457	chr13:26221457:C:T	rs114551346	C	T	c	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr13	26328109	26328110	chr13:26328110:A:C	rs1319541087	A	C	A	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr13	26501333	26501334	chr13:26501334:G:A	rs772289636	G	A	G	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr13	26910204	26910205	chr13:26910205:C:A	rs7986861	C	A	A	Hoxd9.mouse_homeodomain_1	2	1	+	7.716978748812629	7.0154228899258175	GACATAAAA
chr13	26962713	26962714	chr13:26962714:T:G	rs58778253	T	G	T	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr13	26983221	26983222	chr13:26983222:C:T	rs79875392	C	T	C	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr13	27036983	27036984	chr13:27036984:A:G	rs114556131	A	G	A	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr13	27041653	27041654	chr13:27041654:A:G	rs6491182	A	G	A	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr13	27064852	27064853	chr13:27064853:G:C	rs4130957	G	C	G	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr13	27170229	27170230	chr13:27170230:A:G	rs7333276	A	G	A	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr13	27179637	27179638	chr13:27179638:G:T	rs4771076	G	T	G	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr13	27194411	27194412	chr13:27194412:G:A	rs139381853	G	A	G	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr13	27295140	27295141	chr13:27295141:C:T	rs9553986	C	T	C	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr13	27370383	27370384	chr13:27370384:A:T	rs9554016	A	T	T	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr13	27370413	27370414	chr13:27370414:C:T	rs9319362	C	T	C	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr13	27427637	27427638	chr13:27427638:T:C	rs1218793	T	C	T	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr13	27599524	27599525	chr13:27599525:C:A	rs9512760	C	A	A	Hoxd9.mouse_homeodomain_1	2	1	+	7.654940340027237	6.953384481140425	CCCGTAAAA
chr13	27722837	27722838	chr13:27722838:A:G	rs79052628	A	G	A	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr13	27791227	27791228	chr13:27791228:G:C	rs187906595	G	C	G	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr13	27956848	27956849	chr13:27956849:A:G	rs74043641	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.287463081002919	6.953384481140425	CCAATAAAA
chr13	27956868	27956869	chr13:27956869:A:G	rs74043642	A	G	A	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr13	28032383	28032384	chr13:28032384:C:T	rs6491247	C	T	T	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr13	28038898	28038899	chr13:28038899:C:T	rs111716728	C	T	C	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr13	28394762	28394763	chr13:28394763:C:T	rs2057535	C	T	C	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr13	29032775	29032776	chr13:29032776:C:T	rs2479757	C	T	T	Hoxd9.mouse_homeodomain_1	2	1	+	8.409487817756228	1.922047360132591	CCCATTAAA
chr13	29049498	29049499	chr13:29049499:G:A	rs2479772	G	A	A	Hoxd9.mouse_homeodomain_1	0	1	+	8.099252595576761	7.3103675617196195	GCCATTAAA
chr13	29049512	29049513	chr13:29049513:G:C	rs9578071	G	C	C	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr13	29132514	29132515	chr13:29132515:C:G	rs4590984	C	G	C	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr13	29170784	29170785	chr13:29170785:A:T	chr13:29170785:A:T	A	T	A	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr13	29224190	29224191	chr13:29224191:C:G	rs4769697	C	G	-	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr13	29455572	29455573	chr13:29455573:A:C	rs73444079	A	C	A	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr13	29455584	29455585	chr13:29455585:C:A	rs1986785	C	A	A	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr13	29678905	29678906	chr13:29678906:A:G	rs7986326	A	G	A	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr13	29702844	29702845	chr13:29702845:T:C	rs973704923	T	C	T	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr13	29763596	29763597	chr13:29763597:C:T	rs371004786	C	T	C	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr13	29854996	29854997	chr13:29854997:T:A	rs278043	T	A	A	Hoxd9.mouse_homeodomain_1	3	1	-	7.889898683853121	5.886417547044477	ACCATAAAA
chr13	29922718	29922719	chr13:29922719:T:G	rs73450320	T	G	T	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr13	30033747	30033748	chr13:30033748:G:T	rs114854663	G	T	G	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr13	30134436	30134437	chr13:30134437:C:T	rs9508647	C	T	C	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr13	30289950	30289951	chr13:30289951:G:A	rs9508696	G	A	G	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr13	30466344	30466345	chr13:30466345:A:G	rs77376623	A	G	A	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr13	30466382	30466383	chr13:30466383:G:A	rs527243638	G	A	G	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr13	30523435	30523436	chr13:30523436:A:G	rs7338997	A	G	G	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr13	30523439	30523440	chr13:30523440:C:T	rs75201249	C	T	c	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr13	30674631	30674632	chr13:30674632:C:T	rs76383538	C	T	C	Hoxd9.mouse_homeodomain_1	2	1	+	7.654940340027237	1.1674998824035994	CCCGTAAAA
chr13	30753383	30753384	chr13:30753384:T:C	rs10507393	T	C	T	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr13	30877359	30877360	chr13:30877360:A:C	rs213607	A	C	A	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr13	31024711	31024712	chr13:31024712:T:C	rs7319862	T	C	T	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr13	31101701	31101702	chr13:31101702:A:G	rs17620507	A	G	G	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr13	31279810	31279811	chr13:31279811:C:G	rs9543430	C	G	C	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr13	31310181	31310182	chr13:31310182:G:A	rs2313819	G	A	G	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr13	31427530	31427531	chr13:31427531:C:T	rs11841280	C	T	C	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr13	31605725	31605726	chr13:31605726:A:G	rs9532219	A	G	A	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr13	32115446	32115447	chr13:32115447:T:C	rs4529997	T	C	T	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr13	32115464	32115465	chr13:32115465:A:G	rs455428	A	G	A	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr13	32153376	32153377	chr13:32153377:C:G	rs114451218	C	G	C	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr13	32200956	32200957	chr13:32200957:C:G	rs2520701	C	G	C	Hoxd9.mouse_homeodomain_1	6	1	+	7.241935125048919	2.285192993297999	CCCATACAA
chr13	32210456	32210457	chr13:32210457:A:G	rs798994	A	G	A	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr13	32538653	32538654	chr13:32538654:A:G	rs766082553	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.287463081002919	6.953384481140425	CCAATAAAA
chr13	32656980	32656981	chr13:32656981:A:G	rs113028082	A	G	A	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr13	32921570	32921571	chr13:32921571:A:G	rs74047240	A	G	A	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr13	32950115	32950116	chr13:32950116:A:G	rs416945	A	G	G	Hoxd9.mouse_homeodomain_1	5	1	+	7.212456609225008	0.8382668909784519	GCCATAAAG
chr13	33059096	33059097	chr13:33059097:A:G	rs1053837986	A	G	A	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr13	33176832	33176833	chr13:33176833:A:G	rs2301380	A	G	A	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr13	33245601	33245602	chr13:33245602:A:G	rs9591622	A	G	A	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr13	33258398	33258399	chr13:33258399:C:T	rs7327586	C	T	C	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr13	33258689	33258690	chr13:33258690:T:G	rs543357676	T	G	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.889898683853121	1.3143905796496398	ACCATAAAA
chr13	33372640	33372641	chr13:33372641:G:A	rs58758830	G	A	G	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr13	33410268	33410269	chr13:33410269:G:A	rs17079082	G	A	G	Hoxd9.mouse_homeodomain_1	0	1	-	8.287463081002919	6.392915775693977	CCAATAAAA
chr13	33451439	33451440	chr13:33451440:A:G	rs9527554	A	G	A	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr13	33510077	33510078	chr13:33510078:G:T	rs61945493	G	T	T	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr13	33552378	33552379	chr13:33552379:T:C	rs148523264	T	C	T	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr13	33624299	33624300	chr13:33624300:A:G	rs7985396	A	G	A	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr13	33675202	33675203	chr13:33675203:T:C	rs9563683	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.1462160923678635	5.81213749250537	GCCATAAAC
chr13	33724309	33724310	chr13:33724310:A:C	rs7319504	A	C	A	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr13	33728436	33728437	chr13:33728437:G:A	rs9592005	G	A	G	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr13	33728447	33728448	chr13:33728448:G:T	rs116596434	G	T	T	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr13	33729194	33729195	chr13:33729195:A:C	rs9598036	A	C	A	Hoxd9.mouse_homeodomain_1	5	1	+	8.98901893988973	7.091711387329735	CCCATAAAA
chr13	33774599	33774600	chr13:33774600:T:C	rs7998762	T	C	-	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr13	34370212	34370213	chr13:34370213:T:A	rs1337956	T	A	T	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr13	34410688	34410689	chr13:34410689:A:C	rs1535997	A	C	C	Hoxd9.mouse_homeodomain_1	4	1	-	7.9772278588234515	1.1354094114928457	GCAATAAAA
chr13	34410709	34410710	chr13:34410710:C:T	rs10507417	C	T	C	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr13	34411956	34411957	chr13:34411957:C:G	rs9540762	C	G	C	Hoxd9.mouse_homeodomain_1	1	1	+	8.98901893988973	2.5794857111073646	CCCATAAAA
chr13	34622903	34622904	chr13:34622904:G:C	rs55813125	G	C	G	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr13	34723321	34723322	chr13:34723322:A:T	rs9564575	A	T	A	Hoxd9.mouse_homeodomain_1	4	1	-	8.287463081002919	1.445644633672313	CCAATAAAA
chr13	35141037	35141038	chr13:35141038:C:A	rs74048915	C	A	C	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr13	35457936	35457937	chr13:35457937:A:G	rs78528607	A	G	A	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr13	35649161	35649162	chr13:35649162:G:A	rs2479437	G	A	g	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr13	35711396	35711397	chr13:35711397:C:T	rs9565504	C	T	T	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr13	35815315	35815316	chr13:35815316:T:C	rs7986355	T	C	T	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr13	35961992	35961993	chr13:35961993:T:C	rs146817326	T	C	T	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr13	36198058	36198059	chr13:36198059:C:T	rs2183050	C	T	T	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr13	36736389	36736390	chr13:36736390:T:C	rs118134430	T	C	T	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr13	36862330	36862331	chr13:36862331:C:T	rs77403447	C	T	C	Hoxd9.mouse_homeodomain_1	1	1	+	7.212456609225008	5.897654694892	GCCATAAAG
chr13	37027849	37027850	chr13:37027850:A:C	rs7338929	A	C	C	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr13	37070445	37070446	chr13:37070446:C:T	rs1199985	C	T	C	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr13	37446332	37446333	chr13:37446333:A:G	rs61947266	A	G	A	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr13	37446355	37446356	chr13:37446356:T:C	rs2025246	T	C	C	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr13	37486109	37486110	chr13:37486110:T:G	rs9576280	T	G	G	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr13	37502381	37502382	chr13:37502382:A:C	rs9603216	A	C	A	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr13	37622489	37622490	chr13:37622490:C:A	rs73184522	C	A	C	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr13	37640654	37640655	chr13:37640655:C:T	rs2031272	C	T	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.34470511784777	8.678783717710262	GCCGTAAAA
chr13	37781806	37781807	chr13:37781807:C:A	rs4943538	C	A	C	Hoxd9.mouse_homeodomain_1	2	1	+	7.889898683853121	7.188342824966311	ACCATAAAA
chr13	37953837	37953838	chr13:37953838:C:T	rs75300170	C	T	C	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr13	38110022	38110023	chr13:38110023:C:T	rs4943561	C	T	C	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr13	38386573	38386574	chr13:38386574:A:T	rs1590952	A	T	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.409487817756228	6.406006680947584	CCCATTAAA
chr13	38399203	38399204	chr13:38399204:A:G	rs140365958	A	G	A	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr13	38767793	38767794	chr13:38767794:T:G	rs77981701	T	G	T	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr13	39025746	39025747	chr13:39025747:G:A	rs1409441	G	A	a	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr13	39025765	39025766	chr13:39025766:A:G	rs1409442	A	G	G	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr13	39096015	39096016	chr13:39096016:T:C	rs4611329	T	C	C	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr13	39096038	39096039	chr13:39096039:G:A	rs2875272	G	A	G	Hoxd9.mouse_homeodomain_1	0	1	-	8.409487817756228	6.514940512447287	CCCATTAAA
chr13	39326515	39326516	chr13:39326516:G:A	rs11618163	G	A	G	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr13	39345685	39345686	chr13:39345686:C:T	rs7998423	C	T	C	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr13	39411387	39411388	chr13:39411388:C:T	rs74477787	C	T	C	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr13	39870495	39870496	chr13:39870496:T:C	rs12866856	T	C	T	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr13	39887653	39887654	chr13:39887654:T:A	rs2324459	T	A	T	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr13	40101663	40101664	chr13:40101664:G:T	rs2324525	G	T	G	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr13	40101692	40101693	chr13:40101693:A:G	rs184736131	A	G	A	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr13	40207101	40207102	chr13:40207102:C:T	rs150895206	C	T	c	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr13	40272016	40272017	chr13:40272017:G:A	rs529195437	G	A	G	Hoxd9.mouse_homeodomain_1	0	1	-	7.522691831404475	5.628144526095533	CCCATAAAG
chr13	40335502	40335503	chr13:40335503:A:G	rs2324595	A	G	A	Hoxd9.mouse_homeodomain_1	4	1	-	7.889898683853121	5.234852038990543	ACCATAAAA
chr13	40337927	40337928	chr13:40337928:A:G	rs6563823	A	G	A	Hoxd9.mouse_homeodomain_1	5	1	+	8.98901893988973	2.6148292216431743	CCCATAAAA
chr13	40340953	40340954	chr13:40340954:G:A	rs73171129	G	A	G	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr13	40343676	40343677	chr13:40343677:C:A	rs11618549	C	A	C	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr13	40439404	40439405	chr13:40439405:C:T	rs187893858	C	T	C	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr13	40536693	40536694	chr13:40536694:C:T	rs908945328	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	-	7.212456609225008	6.423571575367866	GCCATAAAG
chr13	40536696	40536697	chr13:40536697:T:G	rs199917348	T	G	t	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr13	40540635	40540636	chr13:40540636:T:C	rs17630036	T	C	T	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr13	40595823	40595824	chr13:40595824:T:C	rs542084029	T	C	T	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr13	40683280	40683281	chr13:40683281:C:A	rs78984855	C	A	A	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr13	40771680	40771681	chr13:40771681:T:C	rs34765102	T	C	.	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr13	41246577	41246578	chr13:41246578:T:C	rs9525466	T	C	t	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr13	41325266	41325267	chr13:41325267:A:G	rs28501271	A	G	A	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr13	41407548	41407549	chr13:41407549:A:G	rs540806834	A	G	A	Hoxd9.mouse_homeodomain_1	4	1	-	7.9772278588234515	5.3221812139608735	GCAATAAAA
chr13	41533765	41533766	chr13:41533766:A:G	rs6561005	A	G	G	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr13	41645528	41645529	chr13:41645529:G:A	rs34482437	G	A	G	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr13	41645553	41645554	chr13:41645554:C:A	rs779701852	C	A	C	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr13	42146562	42146563	chr13:42146563:G:A	rs9525580	G	A	G	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr13	42164974	42164975	chr13:42164975:C:G	chr13:42164975:C:G	C	G	C	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr13	42348875	42348876	chr13:42348876:C:T	rs17063227	C	T	T	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr13	42413220	42413221	chr13:42413221:C:T	rs9533099	C	T	C	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr13	42562444	42562445	chr13:42562445:C:T	rs17536280	C	T	C	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr13	43005293	43005294	chr13:43005294:G:A	rs78856476	G	A	G	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr13	43172490	43172491	chr13:43172491:C:T	rs9315998	C	T	T	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr13	43343987	43343988	chr13:43343988:G:A	rs1317310	G	A	A	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr13	43353511	43353512	chr13:43353512:A:G	rs9594929	A	G	A	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr13	43353524	43353525	chr13:43353525:A:G	rs6561122	A	G	A	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr13	43477716	43477717	chr13:43477717:T:C	rs1983792	T	C	C	Hoxd9.mouse_homeodomain_1	7	1	-	7.522691831404475	0.8188658848127437	CCCATAAAG
chr13	43488074	43488075	chr13:43488075:G:A	rs74063868	G	A	G	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr13	43517132	43517133	chr13:43517133:G:T	rs7317280	G	T	T	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr13	43572876	43572877	chr13:43572877:T:C	rs77835270	T	C	T	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr13	43836532	43836533	chr13:43836533:T:C	rs9533646	T	C	T	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr13	43986833	43986834	chr13:43986834:T:C	rs4942263	T	C	T	Hoxd9.mouse_homeodomain_1	4	1	+	7.9772278588234515	5.3221812139608735	GCAATAAAA
chr13	44044853	44044854	chr13:44044854:G:A	rs139377586	G	A	G	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr13	44045756	44045757	chr13:44045757:G:T	rs7984684	G	T	T	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr13	44092607	44092608	chr13:44092608:A:G	rs4941481	A	G	A	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr13	44198078	44198079	chr13:44198079:C:T	rs75191728	C	T	C	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr13	44306660	44306661	chr13:44306661:G:A	rs565081849	G	A	G	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr13	44519864	44519865	chr13:44519865:A:G	rs7999606	A	G	A	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr13	44519875	44519876	chr13:44519876:T:C	rs9533889	T	C	T	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr13	44523342	44523343	chr13:44523343:G:A	rs149279072	G	A	G	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr13	44523346	44523347	chr13:44523347:T:C	rs962860968	T	C	T	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr13	44686784	44686785	chr13:44686785:A:G	rs369480493	A	G	A	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr13	44714525	44714526	chr13:44714526:G:A	rs149008677	G	A	G	Hoxd9.mouse_homeodomain_1	1	1	-	8.409487817756228	7.094685903423221	CCCATTAAA
chr13	44873083	44873084	chr13:44873084:C:A	rs115833790	C	A	C	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr13	44905699	44905700	chr13:44905700:C:A	rs2031165	C	A	C	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr13	45206735	45206736	chr13:45206736:A:T	rs17066516	A	T	A	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr13	45396637	45396638	chr13:45396638:T:C	rs9316136	T	C	.	Hoxd9.mouse_homeodomain_1	7	1	-	8.027213970992095	1.3233880244003648	CACATAAAA
chr13	45414042	45414043	chr13:45414043:T:C	rs79013493	T	C	.	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr13	45434796	45434797	chr13:45434797:T:A	rs77225553	T	A	.	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr13	45465813	45465814	chr13:45465814:A:G	rs73478455	A	G	.	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr13	45695299	45695300	chr13:45695300:G:T	rs74073443	G	T	T	Hoxd9.mouse_homeodomain_1	1	1	-	8.409487817756228	7.447682848858594	CCCATTAAA
chr13	45806398	45806399	chr13:45806399:G:A	rs9526109	G	A	A	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr13	45832554	45832555	chr13:45832555:T:C	rs67884693	T	C	T	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr13	45879381	45879382	chr13:45879382:C:G	rs60929075	C	G	c	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr13	45913021	45913022	chr13:45913022:C:T	rs2573280	C	T	T	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr13	46038700	46038701	chr13:46038701:A:G	rs7996875	A	G	A	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr13	46095414	46095415	chr13:46095415:T:A	rs7991899	T	A	T	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr13	46374683	46374684	chr13:46374684:G:A	rs2478042	G	A	G	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr13	46386019	46386020	chr13:46386020:G:A	rs12869824	G	A	G	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr13	46616318	46616319	chr13:46616319:T:C	rs112714951	T	C	T	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr13	46616337	46616338	chr13:46616338:C:T	rs79491744	C	T	T	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr13	46760048	46760049	chr13:46760049:G:C	rs7332790	G	C	C	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr13	46927203	46927204	chr13:46927204:A:C	rs79939977	A	C	A	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr13	47069620	47069621	chr13:47069621:G:T	rs11148028	G	T	G	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr13	47457578	47457579	chr13:47457579:T:C	rs10220222	T	C	C	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr13	47547160	47547161	chr13:47547161:C:T	rs118107609	C	T	C	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr13	47640138	47640139	chr13:47640139:A:T	rs1172427	A	T	t	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr13	47846692	47846693	chr13:47846693:A:T	rs9526401	A	T	A	Hoxd9.mouse_homeodomain_1	5	1	+	7.889898683853121	7.3103675617196195	ACCATAAAA
chr13	48054312	48054313	chr13:48054313:T:C	rs9595835	T	C	T	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr13	48090999	48091000	chr13:48091000:T:C	rs144265943	T	C	T	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr13	48121694	48121695	chr13:48121695:G:A	rs9316359	G	A	G	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr13	48156786	48156787	chr13:48156787:T:A	rs144610813	T	A	T	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr13	48156821	48156822	chr13:48156822:T:C	rs595271	T	C	T	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr13	48319646	48319647	chr13:48319647:T:C	rs184977744	T	C	C	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr13	48515086	48515087	chr13:48515087:T:C	rs9316388	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.889898683853121	6.555820083990628	ACCATAAAA
chr13	48543470	48543471	chr13:48543471:C:T	rs6561460	C	T	T	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr13	48551352	48551353	chr13:48551353:A:T	rs74074951	A	T	A	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr13	48737275	48737276	chr13:48737276:A:G	rs9526492	A	G	G	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr13	49346638	49346639	chr13:49346639:C:A	rs138324437	C	A	C	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr13	49346639	49346640	chr13:49346640:G:A	rs9596084	G	A	G	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr13	49607180	49607181	chr13:49607181:G:A	rs1380471007	G	A	G	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr13	49691972	49691973	chr13:49691973:T:C	rs3809325	T	C	T	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr13	49785427	49785428	chr13:49785428:T:C	rs139463678	T	C	T	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr13	50016734	50016735	chr13:50016735:A:C	rs2066550	A	C	A	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr13	50082967	50082968	chr13:50082968:A:G	rs55682878	A	G	A	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr13	50129513	50129514	chr13:50129514:C:G	rs79663428	C	G	C	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr13	50133768	50133769	chr13:50133769:C:T	rs181278351	C	T	C	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr13	50223002	50223003	chr13:50223003:C:G	rs79596055	C	G	C	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr13	50360033	50360034	chr13:50360034:G:A	rs752213	G	A	G	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr13	50386241	50386242	chr13:50386242:A:C	rs200220	A	C	C	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr13	50427428	50427429	chr13:50427429:A:G	rs149271572	A	G	A	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr13	50513306	50513307	chr13:50513307:C:A	rs202346	C	A	A	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr13	50540053	50540054	chr13:50540054:A:G	rs3116604	A	G	G	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr13	50684749	50684750	chr13:50684750:G:A	rs1149819	G	A	G	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr13	51034951	51034952	chr13:51034952:C:A	rs1004938	C	A	C	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr13	51131388	51131389	chr13:51131389:T:C	rs7991731	T	C	T	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr13	51250191	51250192	chr13:51250192:A:G	rs10492519	A	G	A	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr13	51255356	51255357	chr13:51255357:A:G	rs9316531	A	G	A	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr13	51419134	51419135	chr13:51419135:T:C	rs113850975	T	C	T	Hoxd9.mouse_homeodomain_1	8	1	-	7.716978748812629	6.250651640327374	GACATAAAA
chr13	51504354	51504355	chr13:51504355:C:T	rs9526771	C	T	C	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr13	51783845	51783846	chr13:51783846:C:T	chr13:51783846:C:T	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	-	7.9772278588234515	7.188342824966311	GCAATAAAA
chr13	51807753	51807754	chr13:51807754:C:T	rs78446593	C	T	C	Hoxd9.mouse_homeodomain_1	3	1	-	7.34470511784777	8.678783717710262	GCCGTAAAA
chr13	51820203	51820204	chr13:51820204:T:C	rs7992588	T	C	T	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr13	51874817	51874818	chr13:51874818:C:T	rs750488624	C	T	C	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr13	51874829	51874830	chr13:51874830:C:T	rs11617792	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	-	8.678783717710262	7.889898683853121	GCCATAAAA
chr13	51874833	51874834	chr13:51874834:G:A	rs58919798	G	A	G	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr13	51980884	51980885	chr13:51980885:T:C	rs9535813	T	C	C	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr13	52411587	52411588	chr13:52411588:C:G	rs113601225	C	G	C	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr13	52904003	52904004	chr13:52904004:G:A	rs17052423	G	A	G	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr13	52937074	52937075	chr13:52937075:G:T	rs61951878	G	T	G	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr13	52937081	52937082	chr13:52937082:A:G	rs76486098	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.287463081002919	6.953384481140425	CCAATAAAA
chr13	52981120	52981121	chr13:52981121:C:T	rs2226194	C	T	C	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr13	53189411	53189412	chr13:53189412:C:A	rs9536371	C	A	C	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr13	54376341	54376342	chr13:54376342:A:G	rs9536698	A	G	A	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr13	55419936	55419937	chr13:55419937:T:C	rs9527379	T	C	T	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr13	57046681	57046682	chr13:57046682:G:C	rs140413726	G	C	G	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr13	57557650	57557651	chr13:57557651:G:C	rs4884284	G	C	G	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr13	57627974	57627975	chr13:57627975:T:C	rs2807640	T	C	T	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr13	57673205	57673206	chr13:57673206:C:T	rs149869348	C	T	c	Hoxd9.mouse_homeodomain_1	0	1	+	8.287463081002919	6.392915775693977	CCAATAAAA
chr13	57698926	57698927	chr13:57698927:A:G	rs73207463	A	G	G	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr13	58660214	58660215	chr13:58660215:G:T	rs9563625	G	T	G	Hoxd9.mouse_homeodomain_1	0	1	-	8.287463081002919	7.188342824966311	CCAATAAAA
chr13	58729515	58729516	chr13:58729516:G:A	rs78046285	G	A	G	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr13	58971410	58971411	chr13:58971411:A:G	rs9317034	A	G	G	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr13	59015455	59015456	chr13:59015456:T:A	rs6420320	T	A	A	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr13	59243463	59243464	chr13:59243464:T:A	rs1410275	T	A	A	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr13	59373699	59373700	chr13:59373700:A:G	rs4580053	A	G	A	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr13	59392192	59392193	chr13:59392193:A:T	rs138934125	A	T	A	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr13	59392221	59392222	chr13:59392222:C:T	rs117892721	C	T	C	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr13	59502850	59502851	chr13:59502851:T:G	rs4374050	T	G	T	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr13	60134886	60134887	chr13:60134887:T:C	rs4514570	T	C	T	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr13	60220283	60220284	chr13:60220284:C:T	rs9563796	C	T	C	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr13	60282715	60282716	chr13:60282716:T:G	rs78212172	T	G	T	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr13	60583303	60583304	chr13:60583304:A:G	rs76009037	A	G	A	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr13	60612741	60612742	chr13:60612742:C:T	rs187398583	C	T	C	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr13	60612767	60612768	chr13:60612768:T:A	rs11839032	T	A	T	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr13	60716646	60716647	chr13:60716647:A:G	rs12184614	A	G	A	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr13	60754855	60754856	chr13:60754856:G:A	rs1514159	G	A	A	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr13	60795368	60795369	chr13:60795369:C:G	rs73547536	C	G	C	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr13	61110857	61110858	chr13:61110858:C:T	rs76403495	C	T	T	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr13	61724062	61724063	chr13:61724063:G:A	rs4886366	G	A	A	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr13	61724104	61724105	chr13:61724105:T:C	rs4886367	T	C	C	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr13	62138129	62138130	chr13:62138130:C:A	rs308646	C	A	C	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr13	62143780	62143781	chr13:62143781:G:A	rs55703528	G	A	g	Hoxd9.mouse_homeodomain_1	1	1	-	8.98901893988973	7.674217025556723	CCCATAAAA
chr13	62305436	62305437	chr13:62305437:A:T	rs558307197	A	T	A	Hoxd9.mouse_homeodomain_1	4	1	-	8.027213970992095	1.1853955236614904	CACATAAAA
chr13	62305444	62305445	chr13:62305445:A:G	rs309102	A	G	A	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr13	62387399	62387400	chr13:62387400:T:C	rs71439935	T	C	t	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr13	62388776	62388777	chr13:62388777:T:A	rs4438182	T	A	T	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr13	62429599	62429600	chr13:62429600:G:A	rs114053440	G	A	G	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr13	62653621	62653622	chr13:62653622:A:G	rs1499487	A	G	A	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr13	63024772	63024773	chr13:63024773:G:C	rs2780366	G	C	G	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr13	63052604	63052605	chr13:63052605:C:A	rs61953781	C	A	c	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr13	63052607	63052608	chr13:63052608:T:A	rs61953782	T	A	T	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr13	63161514	63161515	chr13:63161515:A:G	rs1394361	A	G	A	Hoxd9.mouse_homeodomain_1	4	1	-	7.716978748812629	5.061932103950051	GACATAAAA
chr13	63493623	63493624	chr13:63493624:A:C	rs532902	A	C	C	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr13	63566679	63566680	chr13:63566680:A:G	rs375808304	A	G	A	Hoxd9.mouse_homeodomain_1	8	1	+	8.98901893988973	7.522691831404475	CCCATAAAA
chr13	63690746	63690747	chr13:63690747:C:G	rs7335839	C	G	T	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr13	63690746	63690747	chr13:63690747:C:T	chr13:63690747:C:T	C	T	T	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr13	64550148	64550149	chr13:64550149:G:A	rs7998011	G	A	A	Hoxd9.mouse_homeodomain_1	2	1	-	8.98901893988973	2.5015784822660927	CCCATAAAA
chr13	64937226	64937227	chr13:64937227:T:C	rs9598867	T	C	T	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr13	64937231	64937232	chr13:64937232:T:C	rs9598868	T	C	t	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr13	64937249	64937250	chr13:64937250:C:T	rs9598869	C	T	C	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr13	65710703	65710704	chr13:65710704:C:T	rs66959455	C	T	C	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr13	65748560	65748561	chr13:65748561:A:C	rs184326633	A	C	A	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr13	65750063	65750064	chr13:65750064:A:G	rs9540542	A	G	A	Hoxd9.mouse_homeodomain_1	4	1	-	7.716978748812629	5.061932103950051	GACATAAAA
chr13	65917246	65917247	chr13:65917247:T:C	rs1037856	T	C	C	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr13	65933241	65933242	chr13:65933242:A:G	rs3911657	A	G	A	Hoxd9.mouse_homeodomain_1	5	1	+	7.889898683853121	1.5157089656065659	ACCATAAAA
chr13	66047553	66047554	chr13:66047554:T:G	rs578616	T	G	G	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr13	66092201	66092202	chr13:66092202:C:T	rs61956744	C	T	C	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr13	66116269	66116270	chr13:66116270:A:G	rs73497837	A	G	A	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr13	66252102	66252103	chr13:66252103:A:G	rs9540693	A	G	A	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr13	66624592	66624593	chr13:66624593:A:G	rs9529106	A	G	A	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr13	66845000	66845001	chr13:66845001:C:T	rs1530301	C	T	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.654940340027237	8.98901893988973	CCCGTAAAA
chr13	67440368	67440369	chr13:67440369:G:A	rs17525080	G	A	G	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr13	67635946	67635947	chr13:67635947:C:T	rs73507640	C	T	C	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr13	67713800	67713801	chr13:67713801:G:T	rs1039064381	G	T	G	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr13	67792236	67792237	chr13:67792237:A:G	rs17082890	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	7.889898683853121	6.555820083990628	ACCATAAAA
chr13	67828302	67828303	chr13:67828303:A:G	rs9541230	A	G	A	Hoxd9.mouse_homeodomain_1	6	1	+	7.716978748812629	1.0131528022208975	GACATAAAA
chr13	68597564	68597565	chr13:68597565:G:T	rs9541458	G	T	G	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr13	68808657	68808658	chr13:68808658:A:G	rs77505290	A	G	A	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr13	68813871	68813872	chr13:68813872:G:A	rs9541591	G	A	G	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr13	68892924	68892925	chr13:68892925:A:C	rs74824443	A	C	A	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr13	69047862	69047863	chr13:69047863:A:T	rs9599386	A	T	A	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr13	69159467	69159468	chr13:69159468:A:G	rs113266430	A	G	A	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr13	70355246	70355247	chr13:70355247:G:A	rs9599650	G	A	A	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr13	70534744	70534745	chr13:70534745:A:G	rs9542369	A	G	G	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr13	70795727	70795728	chr13:70795728:C:T	rs9599730	C	T	C	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr13	71053058	71053059	chr13:71053059:A:C	rs9572632	A	C	A	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr13	71087733	71087734	chr13:71087734:T:C	rs12876046	T	C	T	Hoxd9.mouse_homeodomain_1	6	1	-	7.716978748812629	1.0131528022208975	GACATAAAA
chr13	71087745	71087746	chr13:71087746:T:C	rs188345884	T	C	T	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr13	71516694	71516695	chr13:71516695:A:C	rs990597594	A	C	A	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr13	71870528	71870529	chr13:71870529:A:T	rs4884969	A	T	T	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr13	72313885	72313886	chr13:72313886:C:T	rs146792951	C	T	C	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr13	72341282	72341283	chr13:72341283:G:A	rs139968936	G	A	G	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr13	72435469	72435470	chr13:72435470:T:C	rs9572979	T	C	T	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr13	72689525	72689526	chr13:72689526:T:C	rs9543073	T	C	T	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr13	72985843	72985844	chr13:72985844:C:T	rs8002688	C	T	T	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr13	73073289	73073290	chr13:73073290:G:T	rs180694225	G	T	G	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr13	73142488	73142489	chr13:73142489:G:A	rs4242949	G	A	G	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr13	73167264	73167265	chr13:73167265:G:A	rs1038616293	G	A	G	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr13	73451656	73451657	chr13:73451657:T:G	rs187107384	T	G	T	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr13	73522738	73522739	chr13:73522739:T:C	rs57380282	T	C	C	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr13	73557016	73557017	chr13:73557017:A:G	rs73226475	A	G	A	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr13	74092808	74092809	chr13:74092809:C:T	rs9530278	C	T	T	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr13	74134329	74134330	chr13:74134330:C:A	rs909889041	C	A	C	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr13	74134336	74134337	chr13:74134337:G:A	rs1409430571	G	A	G	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr13	74138578	74138579	chr13:74138579:G:A	rs12430284	G	A	A	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr13	74191162	74191163	chr13:74191163:C:G	rs17224588	C	G	C	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr13	74324553	74324554	chr13:74324554:T:G	rs2325610	T	G	T	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr13	74967757	74967758	chr13:74967758:C:T	rs35466099	C	T	C	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr13	74986839	74986840	chr13:74986840:T:C	rs143852175	T	C	T	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr13	75052731	75052732	chr13:75052732:C:T	rs1340903	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	-	8.099252595576761	7.3103675617196195	GCCATTAAA
chr13	75223831	75223832	chr13:75223832:T:C	rs512616	T	C	C	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr13	75399707	75399708	chr13:75399708:A:G	rs4133959	A	G	G	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr13	75399708	75399709	chr13:75399709:C:T	rs4393456	C	T	T	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr13	75414106	75414107	chr13:75414107:C:T	rs138505927	C	T	C	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr13	75621424	75621425	chr13:75621425:C:G	rs9530452	C	G	C	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr13	75643485	75643486	chr13:75643486:T:C	rs9318364	T	C	C	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr13	75897392	75897393	chr13:75897393:T:C	rs724852	T	C	T	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr13	76164829	76164830	chr13:76164830:A:G	rs117694734	A	G	A	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr13	76631527	76631528	chr13:76631528:G:T	rs7981888	G	T	T	Hoxd9.mouse_homeodomain_1	6	1	-	7.241935125048919	8.98901893988973	CCCATACAA
chr13	76812403	76812404	chr13:76812404:T:C	rs4293264	T	C	C	Hoxd9.mouse_homeodomain_1	5	1	-	8.678783717710262	2.304593999463707	GCCATAAAA
chr13	76814993	76814994	chr13:76814994:A:G	rs7318487	A	G	A	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr13	76871716	76871717	chr13:76871717:G:C	rs1539465	G	C	C	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr13	77399337	77399338	chr13:77399338:C:T	rs1927407	C	T	C	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr13	77399365	77399366	chr13:77399366:A:G	rs9530646	A	G	A	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr13	77479289	77479290	chr13:77479290:T:C	rs75056117	T	C	t	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr13	77528926	77528927	chr13:77528927:G:C	rs479116	G	C	G	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr13	77807466	77807467	chr13:77807467:A:C	rs914912	A	C	C	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr13	77854782	77854783	chr13:77854783:G:T	rs1572091	G	T	G	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr13	77908706	77908707	chr13:77908707:T:C	rs61963112	T	C	T	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr13	77916792	77916793	chr13:77916793:C:T	rs12720174	C	T	C	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr13	78040490	78040491	chr13:78040491:A:G	rs1815430	A	G	G	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr13	78239717	78239718	chr13:78239718:A:G	rs113879146	A	G	A	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr13	78658684	78658685	chr13:78658685:A:G	chr13:78658685:A:G	A	G	A	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr13	78658685	78658686	chr13:78658686:C:T	chr13:78658686:C:T	C	T	C	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr13	78893344	78893345	chr13:78893345:C:T	rs80190316	C	T	c	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr13	79838254	79838255	chr13:79838255:A:G	rs12100328	A	G	A	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr13	79852247	79852248	chr13:79852248:A:G	rs7320994	A	G	G	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr13	80133039	80133040	chr13:80133040:T:C	rs534413757	T	C	T	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr13	80180127	80180128	chr13:80180128:C:T	rs556789	C	T	T	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr13	80224718	80224719	chr13:80224719:G:T	rs551136	G	T	T	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr13	80235684	80235685	chr13:80235685:A:C	rs17072502	A	C	A	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr13	80276248	80276249	chr13:80276249:G:A	rs7994890	G	A	G	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr13	80551724	80551725	chr13:80551725:G:A	rs9531075	G	A	G	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr13	80957649	80957650	chr13:80957650:G:A	rs17197153	G	A	G	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr13	81110969	81110970	chr13:81110970:C:T	rs3908747	C	T	T	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr13	81375776	81375777	chr13:81375777:A:G	rs375568066	A	G	A	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr13	81394197	81394198	chr13:81394198:A:G	rs1105828	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	7.9772278588234515	6.643149258960959	GCAATAAAA
chr13	81665885	81665886	chr13:81665886:A:G	rs9545829	A	G	G	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr13	81676385	81676386	chr13:81676386:A:G	rs7320358	A	G	G	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr13	81698018	81698019	chr13:81698019:G:T	rs7984647	G	T	G	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr13	82171511	82171512	chr13:82171512:T:C	rs7323552	T	C	T	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr13	82738581	82738582	chr13:82738582:G:C	rs6563306	G	C	C	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr13	82766986	82766987	chr13:82766987:G:A	rs1072702	G	A	G	Hoxd9.mouse_homeodomain_1	0	1	+	8.099252595576761	7.3103675617196195	GCCATTAAA
chr13	82967552	82967553	chr13:82967553:C:T	rs1487776	C	T	c	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr13	83083784	83083785	chr13:83083785:T:C	rs118119866	T	C	T	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr13	83151350	83151351	chr13:83151351:T:C	rs265656	T	C	T	Hoxd9.mouse_homeodomain_1	4	1	+	8.287463081002919	5.632416436140341	CCAATAAAA
chr13	83515285	83515286	chr13:83515286:A:G	rs996533	A	G	A	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr13	83876899	83876900	chr13:83876900:A:G	rs41561712	A	G	A	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr13	84513334	84513335	chr13:84513335:T:C	rs9546733	T	C	C	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr13	84571307	84571308	chr13:84571308:G:A	rs77834762	G	A	G	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr13	84892933	84892934	chr13:84892934:T:C	rs9546910	T	C	-	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr13	84908708	84908709	chr13:84908709:A:G	rs4555047	A	G	G	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr13	85027569	85027570	chr13:85027570:A:G	rs2485238	A	G	A	Hoxd9.mouse_homeodomain_1	7	1	+	8.98901893988973	2.285192993297999	CCCATAAAA
chr13	85056776	85056777	chr13:85056777:C:T	rs11842031	C	T	T	Hoxd9.mouse_homeodomain_1	2	1	+	7.889898683853121	1.4024582262294842	ACCATAAAA
chr13	85094116	85094117	chr13:85094117:G:A	rs150370123	G	A	G	Hoxd9.mouse_homeodomain_1	0	1	-	8.98901893988973	7.094471634580788	CCCATAAAA
chr13	85224389	85224390	chr13:85224390:C:A	rs77736240	C	A	C	Hoxd9.mouse_homeodomain_1	1	1	+	7.212456609225008	6.250651640327374	GCCATAAAG
chr13	85228386	85228387	chr13:85228387:G:A	rs75419728	G	A	G	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr13	85228855	85228856	chr13:85228856:C:T	rs79082799	C	T	C	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr13	85347250	85347251	chr13:85347251:C:A	rs79181929	C	A	C	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr13	85501054	85501055	chr13:85501055:G:A	rs9547240	G	A	G	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr13	85632032	85632033	chr13:85632033:T:C	rs943920	T	C	C	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr13	85971099	85971100	chr13:85971100:T:A	rs7999719	T	A	A	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr13	86020570	86020571	chr13:86020571:C:A	rs9547471	C	A	A	Hoxd9.mouse_homeodomain_1	0	1	-	8.099252595576761	6.514940512447287	GCCATTAAA
chr13	86021131	86021132	chr13:86021132:T:A	rs9602949	T	A	T	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr13	86567391	86567392	chr13:86567392:T:C	rs8000086	T	C	C	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr13	86810844	86810845	chr13:86810845:A:G	rs9523416	A	G	A	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr13	86826227	86826228	chr13:86826228:C:G	rs9515993	C	G	G	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr13	87899089	87899090	chr13:87899090:A:C	rs1899461	A	C	C	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr13	88143842	88143843	chr13:88143843:A:G	rs9558480	A	G	A	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr13	88339406	88339407	chr13:88339407:C:T	rs2085227	C	T	T	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr13	88432255	88432256	chr13:88432256:A:T	rs338699	A	T	A	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr13	89829918	89829919	chr13:89829919:G:A	rs7334791	G	A	A	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr13	89920679	89920680	chr13:89920680:A:T	rs1341656	A	T	A	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr13	90020895	90020896	chr13:90020896:T:G	rs9583763	T	G	T	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr13	90396682	90396683	chr13:90396683:C:A	rs1325330	C	A	C	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr13	90404125	90404126	chr13:90404126:C:T	rs116931606	C	T	C	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr13	90444924	90444925	chr13:90444925:A:G	rs61971021	A	G	A	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr13	90485763	90485764	chr13:90485764:A:G	rs993377	A	G	G	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr13	90496963	90496964	chr13:90496964:A:G	rs13378798	A	G	A	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr13	90757028	90757029	chr13:90757029:G:A	rs2027456	G	A	G	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr13	90834965	90834966	chr13:90834966:C:T	rs75601430	C	T	C	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr13	91592169	91592170	chr13:91592170:T:C	rs77924033	T	C	T	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr13	92163193	92163194	chr13:92163194:A:G	rs113089725	A	G	g	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr13	92383095	92383096	chr13:92383096:C:T	rs9523654	C	T	C	Hoxd9.mouse_homeodomain_1	2	1	+	8.678783717710262	2.1913432600866263	GCCATAAAA
chr13	92390543	92390544	chr13:92390544:G:A	rs76227919	G	A	G	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr13	93206781	93206782	chr13:93206782:C:T	rs9516193	C	T	C	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr13	93415032	93415033	chr13:93415033:G:A	rs1323990	G	A	A	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr13	93480808	93480809	chr13:93480809:T:C	rs7982827	T	C	T	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr13	93787325	93787326	chr13:93787326:A:C	rs7329113	A	C	C	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr13	94232791	94232792	chr13:94232792:C:T	rs16949639	C	T	C	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr13	94265875	94265876	chr13:94265876:A:G	rs9556361	A	G	G	Hoxd9.mouse_homeodomain_1	4	1	-	8.287463081002919	5.632416436140341	CCAATAAAA
chr13	94330874	94330875	chr13:94330875:T:C	rs115587109	T	C	T	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr13	94389803	94389804	chr13:94389804:A:C	rs7981761	A	C	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.98901893988973	2.4135108356862487	CCCATAAAA
chr13	94432407	94432408	chr13:94432408:A:T	rs56044117	A	T	A	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr13	94551366	94551367	chr13:94551367:G:T	rs7988845	G	T	G	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr13	94608166	94608167	chr13:94608167:T:C	rs9524556	T	C	C	Hoxd9.mouse_homeodomain_1	4	1	+	7.889898683853121	5.234852038990543	ACCATAAAA
chr13	95152342	95152343	chr13:95152343:T:C	rs775880247	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.522691831404475	6.188613231541982	CCCATAAAG
chr13	95185407	95185408	chr13:95185408:T:C	rs1751008	T	C	C	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr13	95221248	95221249	chr13:95221249:G:T	rs9590204	G	T	G	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr13	95221251	95221252	chr13:95221252:A:T	rs9590205	A	T	A	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr13	95233303	95233304	chr13:95233304:A:G	rs9524855	A	G	A	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr13	95345447	95345448	chr13:95345448:C:T	rs756801901	C	T	C	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr13	95412493	95412494	chr13:95412494:G:C	rs1764428	G	C	G	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr13	95457090	95457091	chr13:95457091:T:C	rs35970607	T	C	C	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr13	95464648	95464649	chr13:95464649:T:C	rs34220583	T	C	C	Hoxd9.mouse_homeodomain_1	3	1	-	7.889898683853121	6.555820083990628	ACCATAAAA
chr13	95747583	95747584	chr13:95747584:G:C	rs2389372	G	C	G	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr13	96089685	96089686	chr13:96089686:A:G	rs186636052	A	G	A	Hoxd9.mouse_homeodomain_1	6	1	+	7.889898683853121	1.18607273726139	ACCATAAAA
chr13	96089706	96089707	chr13:96089707:T:C	rs753338574	T	C	T	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr13	96221110	96221111	chr13:96221111:C:T	rs72642936	C	T	C	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr13	96268794	96268795	chr13:96268795:T:C	rs1927794	T	C	T	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr13	96274800	96274801	chr13:96274801:A:G	rs9556543	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	7.889898683853121	6.555820083990628	ACCATAAAA
chr13	96860477	96860478	chr13:96860478:C:T	rs882994	C	T	C	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr13	96899149	96899150	chr13:96899150:C:T	rs35879666	C	T	C	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr13	96899152	96899153	chr13:96899153:G:A	rs72633811	G	A	G	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr13	97165478	97165479	chr13:97165479:C:G	rs9556686	C	G	C	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr13	97206363	97206364	chr13:97206364:C:T	rs17301306	C	T	C	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr13	97321897	97321898	chr13:97321898:T:C	rs9516909	T	C	T	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr13	97321901	97321902	chr13:97321902:A:G	rs7989373	A	G	A	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr13	97683871	97683872	chr13:97683872:C:T	rs947259	C	T	C	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr13	97800408	97800409	chr13:97800409:T:C	rs7317296	T	C	T	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr13	97875143	97875144	chr13:97875144:A:G	rs2095690	A	G	G	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr13	97880528	97880529	chr13:97880529:A:C	rs7985440	A	C	C	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr13	98026429	98026430	chr13:98026430:T:A	rs6491397	T	A	C	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr13	98083533	98083534	chr13:98083534:G:A	rs188449894	G	A	G	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr13	98083570	98083571	chr13:98083571:T:C	rs285065	T	C	C	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr13	98145187	98145188	chr13:98145188:T:C	rs181791802	T	C	T	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr13	98145209	98145210	chr13:98145210:G:A	rs72653381	G	A	A	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr13	98299389	98299390	chr13:98299390:A:G	rs4771301	A	G	A	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr13	98393065	98393066	chr13:98393066:G:A	rs585157	G	A	A	Hoxd9.mouse_homeodomain_1	2	1	-	7.091711387329735	0.6042709297060974	CCCATCAAA
chr13	98442112	98442113	chr13:98442113:C:T	rs71437964	C	T	T	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr13	98445245	98445246	chr13:98445246:G:A	rs61492046	G	A	G	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr13	98445254	98445255	chr13:98445255:G:A	rs3752973	G	A	G	Hoxd9.mouse_homeodomain_1	2	1	-	7.654940340027237	1.1674998824035994	CCCGTAAAA
chr13	98465430	98465431	chr13:98465431:A:G	rs7988345	A	G	G	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr13	98486098	98486099	chr13:98486099:C:T	rs7322911	C	T	T	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr13	98512444	98512445	chr13:98512445:T:C	rs17471066	T	C	t	Hoxd9.mouse_homeodomain_1	3	1	-	8.287463081002919	6.953384481140425	CCAATAAAA
chr13	98544054	98544055	chr13:98544055:A:G	rs117383866	A	G	A	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr13	98575483	98575484	chr13:98575484:T:C	rs7995347	T	C	T	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr13	98648224	98648225	chr13:98648225:C:G	rs117609385	C	G	C	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr13	98741841	98741842	chr13:98741842:T:C	rs72650327	T	C	T	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr13	98792454	98792455	chr13:98792455:A:G	rs150119966	A	G	A	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr13	98814260	98814261	chr13:98814261:C:A	rs772309	C	A	C	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr13	98844265	98844266	chr13:98844266:T:C	rs10459306	T	C	T	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr13	99340025	99340026	chr13:99340026:A:G	rs9557202	A	G	A	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr13	99374934	99374935	chr13:99374935:A:C	rs72651013	A	C	A	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr13	99382336	99382337	chr13:99382337:T:G	rs1977252	T	G	T	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr13	99595470	99595471	chr13:99595471:G:A	rs9517796	G	A	G	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr13	99628537	99628538	chr13:99628538:T:G	rs17611302	T	G	T	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr13	99751954	99751955	chr13:99751955:T:C	rs7984112	T	C	C	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr13	99973950	99973951	chr13:99973951:C:A	rs80074960	C	A	C	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr13	99994033	99994034	chr13:99994034:C:T	rs9557354	C	T	C	Hoxd9.mouse_homeodomain_1	3	1	-	7.075409217893736	8.409487817756228	CCCGTTAAA
chr13	100076109	100076110	chr13:100076110:C:T	rs9513703	C	T	C	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr13	100433886	100433887	chr13:100433887:A:T	rs12585450	A	T	A	Hoxd9.mouse_homeodomain_1	4	1	-	8.027213970992095	1.1853955236614904	CACATAAAA
chr13	100451317	100451318	chr13:100451318:A:G	rs902047387	A	G	A	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr13	100538586	100538587	chr13:100538587:C:T	rs837300	C	T	T	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr13	100637743	100637744	chr13:100637744:C:A	rs7985718	C	A	A	Hoxd9.mouse_homeodomain_1	2	1	+	8.027213970992095	7.325658112105286	CACATAAAA
chr13	100657076	100657077	chr13:100657077:A:G	rs1770359	A	G	G	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr13	100783016	100783017	chr13:100783017:A:G	rs1408166	A	G	A	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr13	100811620	100811621	chr13:100811621:C:T	rs943171418	C	T	C	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr13	100954814	100954815	chr13:100954815:T:C	rs9513829	T	C	T	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr13	100981969	100981970	chr13:100981970:G:C	rs76941131	G	C	G	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr13	101211464	101211465	chr13:101211465:T:A	rs1333752	T	A	T	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr13	101211482	101211483	chr13:101211483:G:C	rs191254633	G	C	G	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr13	101327942	101327943	chr13:101327943:G:A	rs528000	G	A	G	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr13	101390513	101390514	chr13:101390514:A:G	rs145547045	A	G	A	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr13	101574313	101574314	chr13:101574314:C:T	rs2783396	C	T	c	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr13	101662016	101662017	chr13:101662017:G:A	rs72659172	G	A	G	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr13	101786786	101786787	chr13:101786787:A:G	rs12584588	A	G	A	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr13	101982535	101982536	chr13:101982536:G:A	rs2476210	G	A	A	Hoxd9.mouse_homeodomain_1	2	1	-	8.027213970992095	1.5397735133684596	CACATAAAA
chr13	102130926	102130927	chr13:102130927:C:T	rs16959792	C	T	C	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr13	102326253	102326254	chr13:102326254:A:G	rs9518703	A	G	A	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr13	102681424	102681425	chr13:102681425:G:A	rs56023809	G	A	G	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr13	102905006	102905007	chr13:102905007:A:G	rs9557951	A	G	A	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr13	103326428	103326429	chr13:103326429:T:G	rs3918334	T	G	T	Hoxd9.mouse_homeodomain_1	7	1	-	7.716978748812629	4.827562978782042	GACATAAAA
chr13	103883220	103883221	chr13:103883221:C:A	rs9300876	C	A	A	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr13	103977431	103977432	chr13:103977432:G:T	rs2806801	G	T	T	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr13	104021659	104021660	chr13:104021660:T:C	rs9586353	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.287463081002919	6.953384481140425	CCAATAAAA
chr13	104834136	104834137	chr13:104834137:G:C	rs7987012	G	C	C	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr13	104837697	104837698	chr13:104837698:C:T	rs7320588	C	T	T	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr13	104837713	104837714	chr13:104837714:G:A	rs7320917	G	A	A	Hoxd9.mouse_homeodomain_1	2	1	-	7.241935125048919	0.7544946674252814	CCCATACAA
chr13	104943583	104943584	chr13:104943584:C:T	rs76466462	C	T	C	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr13	105097514	105097515	chr13:105097515:T:G	rs7994412	T	G	G	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr13	105341390	105341391	chr13:105341391:C:T	rs61967722	C	T	C	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr13	105591279	105591280	chr13:105591280:A:C	rs1345505	A	C	A	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr13	105626256	105626257	chr13:105626257:T:C	rs1253852	T	C	C	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr13	105626275	105626276	chr13:105626276:C:T	rs78391717	C	T	C	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr13	105706617	105706618	chr13:105706618:G:A	rs73575195	G	A	G	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr13	105930322	105930323	chr13:105930323:C:T	rs12876598	C	T	C	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr13	106105514	106105515	chr13:106105515:A:G	rs73575924	A	G	A	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr13	106105519	106105520	chr13:106105520:C:T	rs78944300	C	T	T	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr13	106143742	106143743	chr13:106143743:T:C	rs9301108	T	C	T	Hoxd9.mouse_homeodomain_1	5	1	-	7.889898683853121	1.5157089656065659	ACCATAAAA
chr13	106143745	106143746	chr13:106143746:G:C	rs114436749	G	C	G	Hoxd9.mouse_homeodomain_1	2	1	-	7.889898683853121	4.421907026400791	ACCATAAAA
chr13	106288222	106288223	chr13:106288223:G:C	rs72654505	G	C	C	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr13	106349677	106349678	chr13:106349678:G:A	rs9520038	G	A	G	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr13	106591576	106591577	chr13:106591577:G:A	rs2391346	G	A	A	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr13	106800000	106800001	chr13:106800001:T:C	rs913968	T	C	t	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr13	106961652	106961653	chr13:106961653:G:A	rs9558915	G	A	A	Hoxd9.mouse_homeodomain_1	0	1	-	8.027213970992095	6.132666665683155	CACATAAAA
chr13	107092687	107092688	chr13:107092688:C:T	rs150257429	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	+	8.409487817756228	6.514940512447287	CCCATTAAA
chr13	107374367	107374368	chr13:107374368:C:T	rs12864261	C	T	C	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr13	107390754	107390755	chr13:107390755:C:T	rs4337166	C	T	C	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr13	107390764	107390765	chr13:107390765:C:G	rs75513065	C	G	C	Hoxd9.mouse_homeodomain_1	2	1	+	8.027213970992095	4.559222313539767	CACATAAAA
chr13	107712375	107712376	chr13:107712376:G:A	rs16970965	G	A	G	Hoxd9.mouse_homeodomain_1	0	1	+	7.9772278588234515	7.188342824966311	GCAATAAAA
chr13	107753578	107753579	chr13:107753579:A:C	rs2211312	A	C	A	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr13	107763282	107763283	chr13:107763283:T:C	rs9559151	T	C	T	Hoxd9.mouse_homeodomain_1	6	1	-	8.409487817756228	1.7056618711644962	CCCATTAAA
chr13	107870172	107870173	chr13:107870173:C:T	rs816960	C	T	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.075409217893736	8.409487817756228	CCCGTTAAA
chr13	108099912	108099913	chr13:108099913:T:C	chr13:108099913:T:C	T	C	T	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr13	108099916	108099917	chr13:108099917:A:C	chr13:108099917:A:C	A	C	A	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr13	108185242	108185243	chr13:108185243:C:T	rs17736629	C	T	C	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr13	109154997	109154998	chr13:109154998:A:G	chr13:109154998:A:G	A	G	A	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr13	109226307	109226308	chr13:109226308:T:C	rs881800	T	C	C	Hoxd9.mouse_homeodomain_1	6	1	-	8.98901893988973	2.285192993297999	CCCATAAAA
chr13	109300421	109300422	chr13:109300422:G:A	rs4322530	G	A	A	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr13	109400275	109400276	chr13:109400276:C:T	rs4773043	C	T	C	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr13	109400295	109400296	chr13:109400296:T:C	rs77513608	T	C	t	Hoxd9.mouse_homeodomain_1	7	1	-	7.9772278588234515	1.2734019122317202	GCAATAAAA
chr13	109624494	109624495	chr13:109624495:T:A	rs887937491	T	A	T	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr13	109869614	109869615	chr13:109869615:G:A	rs116805358	G	A	G	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr13	110062485	110062486	chr13:110062486:G:A	rs9559716	G	A	G	Hoxd9.mouse_homeodomain_1	2	1	-	7.522691831404475	1.0352513737808375	CCCATAAAG
chr13	110096413	110096414	chr13:110096414:T:C	rs367699269	T	C	T	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr13	110145554	110145555	chr13:110145555:C:T	rs1151423	C	T	T	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr13	110338485	110338486	chr13:110338486:G:A	rs117505015	G	A	G	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr13	110338937	110338938	chr13:110338938:C:T	rs7322495	C	T	C	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr13	110403402	110403403	chr13:110403403:A:G	rs7321362	A	G	A	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr13	110417813	110417814	chr13:110417814:A:G	rs9515208	A	G	G	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr13	110417823	110417824	chr13:110417824:C:T	rs9515209	C	T	C	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr13	110422088	110422089	chr13:110422089:A:G	rs9515211	A	G	A	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr13	110425102	110425103	chr13:110425103:G:A	rs7326522	G	A	A	Hoxd9.mouse_homeodomain_1	0	1	+	7.716978748812629	6.928093714955487	GACATAAAA
chr13	110425126	110425127	chr13:110425127:C:T	rs114913603	C	T	C	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr13	110425427	110425428	chr13:110425428:C:T	rs186800725	C	T	C	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr13	110478171	110478172	chr13:110478172:C:T	rs2281974	C	T	T	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr13	110480142	110480143	chr13:110480143:A:G	rs4773194	A	G	G	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr13	110568159	110568160	chr13:110568160:C:T	rs9521844	C	T	C	Hoxd9.mouse_homeodomain_1	8	1	-	7.522691831404475	8.98901893988973	CCCATAAAG
chr13	110643347	110643348	chr13:110643348:C:A	rs7324648	C	A	C	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr13	110837801	110837802	chr13:110837802:C:T	rs7981036	C	T	C	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr13	110877573	110877574	chr13:110877574:T:C	rs56101431	T	C	T	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr13	111143074	111143075	chr13:111143075:G:C	rs7337260	G	C	C	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr13	111183477	111183478	chr13:111183478:C:T	rs908648250	C	T	C	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr13	111232198	111232199	chr13:111232199:T:C	rs9522168	T	C	T	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr13	111282275	111282276	chr13:111282276:C:T	rs567995623	C	T	C	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr13	111282276	111282277	chr13:111282277:A:G	rs3803225	A	G	G	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr13	111319069	111319070	chr13:111319070:G:A	rs2479966	G	A	A	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr13	111363458	111363459	chr13:111363459:C:T	rs191120281	C	T	C	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr13	111401483	111401484	chr13:111401484:C:G	rs186416540	C	G	C	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr13	111451221	111451222	chr13:111451222:C:T	rs1009862854	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	-	7.716978748812629	6.928093714955487	GACATAAAA
chr13	111521804	111521805	chr13:111521805:G:C	rs4773377	G	C	C	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr13	111521806	111521807	chr13:111521807:G:A	rs4773378	G	A	G	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr13	111584320	111584321	chr13:111584321:C:G	rs9522300	C	G	C	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr13	111948156	111948157	chr13:111948157:G:A	rs9549567	G	A	A	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr13	112374948	112374949	chr13:112374949:G:C	rs281206	G	C	G	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr13	112386114	112386115	chr13:112386115:C:T	rs2183445	C	T	C	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr13	112425502	112425503	chr13:112425503:C:T	rs72670915	C	T	C	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr13	112447608	112447609	chr13:112447609:T:C	rs729494	T	C	C	Hoxd9.mouse_homeodomain_1	4	1	+	7.45645131454733	4.801404669684752	CCCATAAAC
chr13	112509994	112509995	chr13:112509995:C:A	rs7336986	C	A	C	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr13	112584062	112584063	chr13:112584063:C:T	rs9550154	C	T	T	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr13	112785903	112785904	chr13:112785904:T:C	rs282623	T	C	T	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr13	112952832	112952833	chr13:112952833:G:A	rs3011479	G	A	G	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr13	113022647	113022648	chr13:113022648:C:T	rs146683592	C	T	C	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr13	113022655	113022656	chr13:113022656:C:G	rs111303897	C	G	C	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr13	113097742	113097743	chr13:113097743:A:T	rs1046205	A	T	A	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr13	113295720	113295721	chr13:113295721:C:T	rs4630437	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	+	7.091711387329735	5.197164082020794	CCCATCAAA
chr13	113295739	113295740	chr13:113295740:T:C	rs56784241	T	C	T	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr13	113391124	113391125	chr13:113391125:A:C	rs145511902	A	C	A	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr13	113458722	113458723	chr13:113458723:C:T	rs9577554	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	+	7.075409217893736	5.180861912584794	CCCGTTAAA
chr13	113542825	113542826	chr13:113542826:T:G	rs76297177	T	G	.	Hoxd9.mouse_homeodomain_1	6	1	-	8.027213970992095	6.2801301561512854	CACATAAAA
chr13	113586456	113586457	chr13:113586457:C:G	rs79658657	C	G	C	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr13	113852206	113852207	chr13:113852207:C:G	chr13:113852207:C:G	C	G	C	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr13	113908206	113908207	chr13:113908207:T:G	rs56332614	T	G	g	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr13	113919696	113919697	chr13:113919697:T:A	rs76863623	T	A	T	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr13	113978727	113978728	chr13:113978728:A:G	rs11552972	A	G	G	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr13	114005244	114005245	chr13:114005245:C:T	rs7991776	C	T	C	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr13	114047307	114047308	chr13:114047308:G:A	rs138477511	G	A	G	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr13	114047350	114047351	chr13:114047351:A:G	rs7316924	A	G	G	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr13	114057770	114057771	chr13:114057771:C:T	rs9525228	C	T	.	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr13	114070512	114070513	chr13:114070513:G:T	rs182644830	G	T	.	Hoxd9.mouse_homeodomain_1	0	1	-	7.241935125048919	6.1428148690123106	CCCATACAA
chr13	114114715	114114716	chr13:114114716:G:A	rs181155997	G	A	g	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr13	114159083	114159084	chr13:114159084:G:A	rs429351	G	A	A	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr14	16125197	16125198	chr14:16125198:G:C	rs1203189336	G	C	.	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr14	16138910	16138911	chr14:16138911:T:A	rs1165241239	T	A	.	Hoxd9.mouse_homeodomain_1	5	1	-	8.027213970992095	7.447682848858594	CACATAAAA
chr14	19669279	19669280	chr14:19669280:C:A	rs368166352	C	A	.	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr14	19814090	19814091	chr14:19814091:A:G	rs10134337	A	G	A	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr14	19894107	19894108	chr14:19894108:A:G	rs1319958	A	G	a	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr14	19894109	19894110	chr14:19894110:A:G	rs1319957	A	G	a	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr14	20609316	20609317	chr14:20609317:G:A	rs1243654	G	A	G	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr14	20782426	20782427	chr14:20782427:C:G	rs934175119	C	G	C	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr14	21036394	21036395	chr14:21036395:G:A	rs1243465	G	A	A	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr14	21036421	21036422	chr14:21036422:T:C	rs1243466	T	C	T	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr14	21051755	21051756	chr14:21051756:C:G	rs28665127	C	G	C	Hoxd9.mouse_homeodomain_1	8	1	+	7.1462160923678635	7.212456609225008	GCCATAAAC
chr14	21060904	21060905	chr14:21060905:C:T	rs4982397	C	T	T	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr14	21071979	21071980	chr14:21071980:G:A	rs80065473	G	A	G	Hoxd9.mouse_homeodomain_1	1	1	-	8.678783717710262	7.363981803377255	GCCATAAAA
chr14	21071980	21071981	chr14:21071981:C:A	rs79621700	C	A	C	Hoxd9.mouse_homeodomain_1	0	1	-	8.678783717710262	7.094471634580788	GCCATAAAA
chr14	21571298	21571299	chr14:21571299:G:C	rs4982463	G	C	G	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr14	22178305	22178306	chr14:22178306:C:G	rs28407901	C	G	G	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr14	22229239	22229240	chr14:22229240:T:C	rs10132912	T	C	C	Hoxd9.mouse_homeodomain_1	3	1	-	7.091711387329735	5.757632787467242	CCCATCAAA
chr14	22291721	22291722	chr14:22291722:C:T	rs75107973	C	T	C	Hoxd9.mouse_homeodomain_1	2	1	+	8.98901893988973	2.5015784822660927	CCCATAAAA
chr14	22389005	22389006	chr14:22389006:T:C	rs4982623	T	C	C	Hoxd9.mouse_homeodomain_1	7	1	-	7.241935125048919	0.5381091784571871	CCCATACAA
chr14	22397437	22397438	chr14:22397438:G:A	rs1034377	G	A	G	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr14	22401712	22401713	chr14:22401713:C:T	rs12891368	C	T	C	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr14	22517677	22517678	chr14:22517678:G:T	rs227030	G	T	G	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr14	22569949	22569950	chr14:22569950:G:A	rs5742835	G	A	G	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr14	22600790	22600791	chr14:22600791:G:A	rs2225215	G	A	G	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr14	22646677	22646678	chr14:22646678:T:C	rs57312906	T	C	t	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr14	22854474	22854475	chr14:22854475:G:A	rs146168638	G	A	G	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr14	22866339	22866340	chr14:22866340:G:A	rs59179222	G	A	G	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr14	22918557	22918558	chr14:22918558:C:G	rs188640634	C	G	C	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr14	22983016	22983017	chr14:22983017:G:A	rs115039814	G	A	G	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr14	22983275	22983276	chr14:22983276:G:A	rs75981288	G	A	G	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr14	23173305	23173306	chr14:23173306:C:T	rs10146083	C	T	C	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr14	23670393	23670394	chr14:23670394:A:G	rs10136556	A	G	a	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr14	23680290	23680291	chr14:23680291:G:A	rs147328802	G	A	G	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr14	23800168	23800169	chr14:23800169:T:C	rs74038870	T	C	C	Hoxd9.mouse_homeodomain_1	3	1	-	7.091711387329735	5.757632787467242	CCCATCAAA
chr14	24576537	24576538	chr14:24576538:C:T	rs3759639	C	T	T	Hoxd9.mouse_homeodomain_1	0	1	+	7.091711387329735	5.197164082020794	CCCATCAAA
chr14	24806007	24806008	chr14:24806008:A:G	rs7156092	A	G	A	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr14	24846670	24846671	chr14:24846671:T:C	rs12880667	T	C	C	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr14	25372052	25372053	chr14:25372053:G:A	rs7161451	G	A	G	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr14	25442888	25442889	chr14:25442889:A:G	rs9323659	A	G	A	Hoxd9.mouse_homeodomain_1	4	1	-	7.889898683853121	5.234852038990543	ACCATAAAA
chr14	26594494	26594495	chr14:26594495:A:C	chr14:26594495:A:C	A	C	A	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr14	26598527	26598528	chr14:26598528:G:A	rs187724817	G	A	G	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr14	26791571	26791572	chr14:26791572:G:A	rs12050074	G	A	A	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr14	26926203	26926204	chr14:26926204:G:C	rs12437120	G	C	G	Hoxd9.mouse_homeodomain_1	0	1	+	7.1462160923678635	7.45645131454733	GCCATAAAC
chr14	26996385	26996386	chr14:26996386:G:A	rs142734008	G	A	G	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr14	27612217	27612218	chr14:27612218:A:G	rs2154141	A	G	G	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr14	27886636	27886637	chr14:27886637:G:A	rs2022814	G	A	G	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr14	27904377	27904378	chr14:27904378:T:G	rs17377819	T	G	T	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr14	28078933	28078934	chr14:28078934:A:G	rs12885788	A	G	A	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr14	28142534	28142535	chr14:28142535:A:T	rs1191385	A	T	A	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr14	28368239	28368240	chr14:28368240:T:C	rs539853427	T	C	T	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr14	28581112	28581113	chr14:28581113:G:T	rs35608048	G	T	G	Hoxd9.mouse_homeodomain_1	1	1	-	8.678783717710262	7.716978748812629	GCCATAAAA
chr14	29800407	29800408	chr14:29800408:T:G	rs61979967	T	G	T	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr14	29892430	29892431	chr14:29892431:A:C	rs890613430	A	C	A	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr14	30002884	30002885	chr14:30002885:T:C	rs28401580	T	C	T	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr14	30005273	30005274	chr14:30005274:T:G	chr14:30005274:T:G	T	G	T	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr14	30394747	30394748	chr14:30394748:C:A	rs7156859	C	A	A	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr14	30450937	30450938	chr14:30450938:T:A	rs116981807	T	A	T	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr14	30738143	30738144	chr14:30738144:G:A	rs73254588	G	A	G	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr14	30796027	30796028	chr14:30796028:G:A	rs72666476	G	A	G	Hoxd9.mouse_homeodomain_1	1	1	-	8.099252595576761	6.784450681243753	GCCATTAAA
chr14	31237189	31237190	chr14:31237190:G:A	rs2378833	G	A	G	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr14	31366572	31366573	chr14:31366573:T:G	rs7149240	T	G	T	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr14	31388461	31388462	chr14:31388462:A:G	rs6571416	A	G	A	Hoxd9.mouse_homeodomain_1	5	1	+	8.027213970992095	1.6530242527455408	CACATAAAA
chr14	31527101	31527102	chr14:31527102:G:T	rs953852621	G	T	G	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr14	31980174	31980175	chr14:31980175:G:A	rs8007104	G	A	A	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr14	31998221	31998222	chr14:31998222:A:G	rs1020065549	A	G	A	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr14	32218981	32218982	chr14:32218982:T:G	rs1887936	T	G	T	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr14	32372432	32372433	chr14:32372433:C:T	rs17098925	C	T	c	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr14	32509521	32509522	chr14:32509522:T:C	rs6571531	T	C	c	Hoxd9.mouse_homeodomain_1	6	1	-	8.678783717710262	1.9749577711185315	GCCATAAAA
chr14	32576391	32576392	chr14:32576392:T:G	rs10467755	T	G	T	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr14	32576413	32576414	chr14:32576414:A:T	rs12587405	A	T	A	Hoxd9.mouse_homeodomain_1	7	1	+	8.287463081002919	6.540379266162109	CCAATAAAA
chr14	32601420	32601421	chr14:32601421:T:A	rs11156754	T	A	A	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr14	32619008	32619009	chr14:32619009:A:G	rs1304338	A	G	G	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr14	32784929	32784930	chr14:32784930:T:C	rs41535345	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.287463081002919	6.953384481140425	CCAATAAAA
chr14	33454411	33454412	chr14:33454412:G:A	rs118076131	G	A	G	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr14	33454418	33454419	chr14:33454419:A:G	rs763313023	A	G	A	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr14	33556669	33556670	chr14:33556670:A:G	rs4982093	A	G	A	Hoxd9.mouse_homeodomain_1	4	1	-	7.241935125048919	4.5868884801863405	CCCATACAA
chr14	33564880	33564881	chr14:33564881:C:T	rs1958539	C	T	T	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr14	33565867	33565868	chr14:33565868:G:A	rs10131389	G	A	A	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr14	33657748	33657749	chr14:33657749:A:C	rs2183273	A	C	A	Hoxd9.mouse_homeodomain_1	6	1	+	8.027213970992095	6.2801301561512854	CACATAAAA
chr14	34085176	34085177	chr14:34085177:G:T	rs2163412	G	T	G	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr14	34219171	34219172	chr14:34219172:C:T	rs139678344	C	T	C	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr14	34359653	34359654	chr14:34359654:A:G	rs58800902	A	G	A	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr14	34359657	34359658	chr14:34359658:T:A	rs61096005	T	A	T	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr14	34450924	34450925	chr14:34450925:A:G	rs148336586	A	G	A	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr14	34598273	34598274	chr14:34598274:T:C	rs7158783	T	C	C	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr14	34746899	34746900	chr14:34746900:A:C	rs908415737	A	C	A	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr14	35214268	35214269	chr14:35214269:T:A	rs148418988	T	A	T	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr14	35214278	35214279	chr14:35214279:G:A	rs7147426	G	A	A	Hoxd9.mouse_homeodomain_1	0	1	-	8.98901893988973	7.094471634580788	CCCATAAAA
chr14	35338301	35338302	chr14:35338302:T:C	rs2415288	T	C	T	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr14	35340037	35340038	chr14:35340038:T:C	rs17103212	T	C	C	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr14	35378844	35378845	chr14:35378845:G:A	rs112685330	G	A	G	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr14	35378855	35378856	chr14:35378856:A:G	rs112048266	A	G	G	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr14	35420316	35420317	chr14:35420317:G:C	rs12434023	G	C	G	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr14	35420318	35420319	chr14:35420319:C:T	rs9630376	C	T	T	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr14	35660764	35660765	chr14:35660765:A:C	rs4982303	A	C	C	Hoxd9.mouse_homeodomain_1	6	1	+	8.027213970992095	6.2801301561512854	CACATAAAA
chr14	36453932	36453933	chr14:36453933:G:A	rs960251	G	A	G	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr14	36596095	36596096	chr14:36596096:A:G	rs12435293	A	G	A	Hoxd9.mouse_homeodomain_1	4	1	-	7.889898683853121	5.234852038990543	ACCATAAAA
chr14	36607437	36607438	chr14:36607438:A:G	rs4903809	A	G	G	Hoxd9.mouse_homeodomain_1	5	1	+	8.287463081002919	1.9132733627563638	CCAATAAAA
chr14	36844474	36844475	chr14:36844475:G:A	rs778046754	G	A	G	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr14	37306553	37306554	chr14:37306554:C:A	chr14:37306554:C:A	C	A	C	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr14	37584128	37584129	chr14:37584129:G:T	rs12432697	G	T	G	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr14	37655300	37655301	chr14:37655301:A:G	rs177869	A	G	G	Hoxd9.mouse_homeodomain_1	3	1	+	7.889898683853121	6.555820083990628	ACCATAAAA
chr14	37741664	37741665	chr14:37741665:C:A	rs7141017	C	A	A	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr14	38109297	38109298	chr14:38109298:G:A	rs8023185	G	A	G	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr14	38313860	38313861	chr14:38313861:G:C	rs1958497	G	C	A	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr14	38357357	38357358	chr14:38357358:C:A	rs1952558	C	A	C	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr14	38701553	38701554	chr14:38701554:A:G	rs11848602	A	G	A	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr14	38701554	38701555	chr14:38701555:T:C	rs11844779	T	C	T	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr14	38848278	38848279	chr14:38848279:T:C	rs1957056	T	C	C	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr14	38866315	38866316	chr14:38866316:A:T	rs79230155	A	T	A	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr14	38949571	38949572	chr14:38949572:A:T	rs7143056	A	T	A	Hoxd9.mouse_homeodomain_1	7	1	+	7.522691831404475	5.775608016563663	CCCATAAAG
chr14	39024562	39024563	chr14:39024563:T:C	rs71407775	T	C	T	Hoxd9.mouse_homeodomain_1	5	1	-	7.889898683853121	1.5157089656065659	ACCATAAAA
chr14	39234293	39234294	chr14:39234294:T:C	rs7143646	T	C	T	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr14	39372916	39372917	chr14:39372917:A:G	rs17109163	A	G	A	Hoxd9.mouse_homeodomain_1	5	1	+	7.9772278588234515	1.603038140576896	GCAATAAAA
chr14	39422254	39422255	chr14:39422255:C:T	rs8003397	C	T	C	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr14	39456967	39456968	chr14:39456968:A:G	rs28689476	A	G	A	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr14	39861958	39861959	chr14:39861959:C:G	rs4899454	C	G	C	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr14	40156050	40156051	chr14:40156051:C:T	rs11157110	C	T	C	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr14	40156060	40156061	chr14:40156061:T:C	rs60982057	T	C	T	Hoxd9.mouse_homeodomain_1	7	1	-	7.45645131454733	0.752625367955599	CCCATAAAC
chr14	40364972	40364973	chr14:40364973:C:T	rs872281	C	T	c	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr14	40574961	40574962	chr14:40574962:C:T	rs9783594	C	T	C	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr14	41285494	41285495	chr14:41285495:A:G	rs689509	A	G	A	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr14	41465801	41465802	chr14:41465802:G:A	rs116950676	G	A	G	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr14	41635560	41635561	chr14:41635561:A:T	rs1101391	A	T	T	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr14	41824578	41824579	chr14:41824579:G:A	rs1951877	G	A	G	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr14	41828621	41828622	chr14:41828622:T:C	rs59618196	T	C	C	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr14	41947685	41947686	chr14:41947686:G:A	rs7359052	G	A	A	Hoxd9.mouse_homeodomain_1	3	1	+	7.654940340027237	8.98901893988973	CCCGTAAAA
chr14	41947704	41947705	chr14:41947705:A:G	rs7147055	A	G	A	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr14	42140790	42140791	chr14:42140791:C:T	rs79138456	C	T	C	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr14	42735471	42735472	chr14:42735472:G:A	rs1954355	G	A	G	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr14	43027707	43027708	chr14:43027708:T:C	rs181307582	T	C	T	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr14	43027721	43027722	chr14:43027722:C:T	rs114652161	C	T	C	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr14	43360100	43360101	chr14:43360101:T:A	rs7144129	T	A	A	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr14	43480080	43480081	chr14:43480081:C:T	rs56127907	C	T	T	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr14	43850149	43850150	chr14:43850150:G:A	rs1951551	G	A	A	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr14	44112745	44112746	chr14:44112746:T:C	rs11624481	T	C	T	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr14	44549516	44549517	chr14:44549517:G:T	rs17548372	G	T	G	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr14	44669431	44669432	chr14:44669432:C:T	rs113005144	C	T	C	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr14	45070310	45070311	chr14:45070311:A:C	rs73334913	A	C	C	Hoxd9.mouse_homeodomain_1	8	1	+	7.889898683853121	6.357331058510722	ACCATAAAA
chr14	45383949	45383950	chr14:45383950:A:G	rs11622664	A	G	.	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr14	45772585	45772586	chr14:45772586:T:C	rs11157457	T	C	T	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr14	46058130	46058131	chr14:46058131:A:T	rs1998251	A	T	A	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr14	46322026	46322027	chr14:46322027:T:C	rs73232335	T	C	T	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr14	46352776	46352777	chr14:46352777:G:A	rs12882450	G	A	A	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr14	46490656	46490657	chr14:46490657:T:G	rs2642106	T	G	G	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr14	47008554	47008555	chr14:47008555:A:T	rs4412901	A	T	A	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr14	47277075	47277076	chr14:47277076:G:C	rs72680274	G	C	G	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr14	47277082	47277083	chr14:47277083:A:G	rs1028829	A	G	A	Hoxd9.mouse_homeodomain_1	5	1	+	7.212456609225008	0.8382668909784519	GCCATAAAG
chr14	47300841	47300842	chr14:47300842:C:A	rs17672024	C	A	C	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr14	47328198	47328199	chr14:47328199:C:T	rs1806787	C	T	T	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr14	47447170	47447171	chr14:47447171:T:G	rs10141117	T	G	T	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr14	47958963	47958964	chr14:47958964:G:A	rs7147649	G	A	g	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr14	48288440	48288441	chr14:48288441:T:C	rs1769518	T	C	T	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr14	48289380	48289381	chr14:48289381:A:G	rs1769513	A	G	G	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr14	48536782	48536783	chr14:48536783:C:A	rs150055623	C	A	C	Hoxd9.mouse_homeodomain_1	0	1	-	7.716978748812629	6.132666665683155	GACATAAAA
chr14	48560512	48560513	chr14:48560513:T:C	rs73253851	T	C	C	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr14	48561781	48561782	chr14:48561782:C:G	rs10162311	C	G	G	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr14	48561789	48561790	chr14:48561790:T:A	rs10162487	T	A	T	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr14	48983290	48983291	chr14:48983291:C:A	rs74048272	C	A	C	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr14	48983291	48983292	chr14:48983292:C:T	rs74048273	C	T	C	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr14	49021322	49021323	chr14:49021323:T:G	rs1016624281	T	G	G	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr14	49497735	49497736	chr14:49497736:T:C	rs7144133	T	C	T	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr14	49502177	49502178	chr14:49502178:A:C	rs8009047	A	C	C	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr14	49997574	49997575	chr14:49997575:A:C	rs7145362	A	C	A	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr14	50040448	50040449	chr14:50040449:G:C	rs149914538	G	C	G	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr14	50055868	50055869	chr14:50055869:T:C	rs8010501	T	C	C	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr14	50070369	50070370	chr14:50070370:C:T	rs11157723	C	T	T	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr14	50100163	50100164	chr14:50100164:G:A	rs7157296	G	A	G	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr14	50396432	50396433	chr14:50396433:G:A	rs539462459	G	A	G	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr14	50794953	50794954	chr14:50794954:T:C	rs10137294	T	C	T	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr14	50958411	50958412	chr14:50958412:T:A	rs7146227	T	A	T	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr14	50968741	50968742	chr14:50968742:T:C	rs1002145	T	C	t	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr14	51035874	51035875	chr14:51035875:C:T	rs73288879	C	T	C	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr14	51079469	51079470	chr14:51079470:A:G	rs528502481	A	G	A	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr14	51119693	51119694	chr14:51119694:G:A	rs10498421	G	A	G	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr14	51138710	51138711	chr14:51138711:G:A	rs2999360	G	A	G	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr14	51139373	51139374	chr14:51139374:T:C	rs17123595	T	C	T	Hoxd9.mouse_homeodomain_1	5	1	-	7.45645131454733	1.0822615963007745	CCCATAAAC
chr14	51317640	51317641	chr14:51317641:C:A	rs146090463	C	A	C	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr14	51382955	51382956	chr14:51382956:T:C	rs59458267	T	C	T	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr14	51534399	51534400	chr14:51534400:A:C	rs17124124	A	C	A	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr14	51581674	51581675	chr14:51581675:G:A	rs4898700	G	A	G	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr14	51653237	51653238	chr14:51653238:G:A	rs112986382	G	A	G	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr14	51653252	51653253	chr14:51653253:G:T	rs77516864	G	T	T	Hoxd9.mouse_homeodomain_1	2	1	-	7.45645131454733	6.75489545566052	CCCATAAAC
chr14	51776619	51776620	chr14:51776620:G:A	rs79264738	G	A	G	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr14	51789443	51789444	chr14:51789444:C:A	rs35970981	C	A	C	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr14	51867833	51867834	chr14:51867834:T:A	rs34867128	T	A	T	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr14	51905423	51905424	chr14:51905424:A:C	rs4901173	A	C	A	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr14	52018478	52018479	chr14:52018479:G:A	rs17124893	G	A	A	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr14	52155442	52155443	chr14:52155443:G:A	rs28414819	G	A	G	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr14	52167215	52167216	chr14:52167216:G:A	rs2884195	G	A	G	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr14	52355689	52355690	chr14:52355690:T:C	rs74961871	T	C	t	Hoxd9.mouse_homeodomain_1	3	1	-	7.212456609225008	5.878378009362515	GCCATAAAG
chr14	52392070	52392071	chr14:52392071:C:T	rs187478236	C	T	C	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr14	52554388	52554389	chr14:52554389:C:T	rs74427857	C	T	C	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr14	53144715	53144716	chr14:53144716:G:T	rs1168089627	G	T	G	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr14	53217139	53217140	chr14:53217140:A:C	rs7143991	A	C	a	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr14	53217381	53217382	chr14:53217382:G:T	rs118058589	G	T	g	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr14	53217382	53217383	chr14:53217383:C:T	rs117785505	C	T	c	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr14	53274759	53274760	chr14:53274760:C:T	rs7152525	C	T	C	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr14	53277333	53277334	chr14:53277334:C:T	rs56959600	C	T	C	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr14	53285974	53285975	chr14:53285975:A:G	rs78686821	A	G	G	Hoxd9.mouse_homeodomain_1	8	1	+	7.9772278588234515	6.510900750338196	GCAATAAAA
chr14	53365937	53365938	chr14:53365938:T:C	rs2113711	T	C	C	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr14	53367338	53367339	chr14:53367339:T:C	chr14:53367339:T:C	T	C	T	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr14	53389486	53389487	chr14:53389487:T:A	rs76138730	T	A	T	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr14	53410188	53410189	chr14:53410189:C:G	rs11629147	C	G	C	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr14	53493413	53493414	chr14:53493414:T:A	rs74052960	T	A	T	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr14	53510345	53510346	chr14:53510346:G:A	rs1959832	G	A	G	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr14	53788791	53788792	chr14:53788792:A:G	rs72678242	A	G	A	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr14	53881946	53881947	chr14:53881947:G:T	rs74053146	G	T	G	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr14	53881948	53881949	chr14:53881949:T:C	rs74053149	T	C	T	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr14	53885178	53885179	chr14:53885179:A:G	rs731901	A	G	A	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr14	53888928	53888929	chr14:53888929:C:A	rs7149469	C	A	A	Hoxd9.mouse_homeodomain_1	1	1	+	8.409487817756228	7.447682848858594	CCCATTAAA
chr14	53891710	53891711	chr14:53891711:A:C	rs1886162	A	C	A	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr14	53894620	53894621	chr14:53894621:C:T	rs17127044	C	T	C	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr14	54052579	54052580	chr14:54052580:T:C	rs8004987	T	C	T	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr14	54137842	54137843	chr14:54137843:A:T	rs186028896	A	T	A	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr14	54505328	54505329	chr14:54505329:T:C	rs74951350	T	C	C	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr14	54638305	54638306	chr14:54638306:T:C	rs10498470	T	C	T	Hoxd9.mouse_homeodomain_1	4	1	+	7.45645131454733	4.801404669684752	CCCATAAAC
chr14	54638314	54638315	chr14:54638315:C:T	rs1951953	C	T	C	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr14	54649874	54649875	chr14:54649875:A:G	rs35982002	A	G	A	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr14	54685224	54685225	chr14:54685225:C:T	rs2057365	C	T	C	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr14	54696539	54696540	chr14:54696540:C:T	rs11622319	C	T	C	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr14	54709451	54709452	chr14:54709452:T:C	rs34393407	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.287463081002919	6.953384481140425	CCAATAAAA
chr14	54796916	54796917	chr14:54796917:A:G	rs1040877	A	G	A	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr14	54844850	54844851	chr14:54844851:C:T	rs752688	C	T	C	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr14	54881108	54881109	chr14:54881109:A:G	rs7155501	A	G	G	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr14	54881115	54881116	chr14:54881116:C:T	rs118144291	C	T	C	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr14	54882118	54882119	chr14:54882119:C:G	rs3825611	C	G	C	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr14	55270524	55270525	chr14:55270525:C:A	rs2341622	C	A	A	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr14	55356180	55356181	chr14:55356181:G:A	rs77895518	G	A	G	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr14	55381573	55381574	chr14:55381574:G:A	rs946058	G	A	G	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr14	55491167	55491168	chr14:55491168:T:C	rs78360804	T	C	T	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr14	55512819	55512820	chr14:55512820:A:T	rs1009714	A	T	A	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr14	55982215	55982216	chr14:55982216:C:T	rs1188167	C	T	.	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr14	56093210	56093211	chr14:56093211:T:G	rs17091008	T	G	T	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr14	56160983	56160984	chr14:56160984:G:T	rs35421243	G	T	G	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr14	56206781	56206782	chr14:56206782:T:C	rs8010678	T	C	C	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr14	56248005	56248006	chr14:56248006:G:C	rs189020737	G	C	G	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr14	56271247	56271248	chr14:56271248:C:T	rs3783677	C	T	C	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr14	56271248	56271249	chr14:56271249:A:G	rs3783678	A	G	A	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr14	56412903	56412904	chr14:56412904:T:G	rs76827604	T	G	T	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr14	56412922	56412923	chr14:56412923:T:C	rs2114744	T	C	T	Hoxd9.mouse_homeodomain_1	8	1	-	8.98901893988973	7.522691831404475	CCCATAAAA
chr14	56412925	56412926	chr14:56412926:T:A	rs72724204	T	A	T	Hoxd9.mouse_homeodomain_1	5	1	-	8.98901893988973	8.409487817756228	CCCATAAAA
chr14	56413101	56413102	chr14:56413102:T:A	rs2114745	T	A	T	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr14	56502286	56502287	chr14:56502287:C:T	rs12587027	C	T	C	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr14	56555366	56555367	chr14:56555367:A:G	rs4326973	A	G	G	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr14	56949747	56949748	chr14:56949748:T:G	rs117729170	T	G	T	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr14	57209611	57209612	chr14:57209612:G:T	rs1804820	G	T	t	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr14	57498114	57498115	chr14:57498115:C:G	rs61995062	C	G	C	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr14	57962441	57962442	chr14:57962442:C:T	rs114872062	C	T	C	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr14	58104533	58104534	chr14:58104534:T:G	rs910879	T	G	G	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr14	58104555	58104556	chr14:58104556:G:A	rs910880	G	A	A	Hoxd9.mouse_homeodomain_1	1	1	-	8.98901893988973	7.674217025556723	CCCATAAAA
chr14	58708366	58708367	chr14:58708367:T:A	rs55721941	T	A	T	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr14	58753077	58753078	chr14:58753078:C:T	rs2651252	C	T	C	Hoxd9.mouse_homeodomain_1	3	1	-	7.654940340027237	8.98901893988973	CCCGTAAAA
chr14	58753082	58753083	chr14:58753083:A:T	rs11627218	A	T	A	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr14	58753095	58753096	chr14:58753096:T:G	rs117732861	T	G	T	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr14	58812747	58812748	chr14:58812748:T:G	rs6573223	T	G	G	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr14	58830265	58830266	chr14:58830266:A:G	rs12586372	A	G	A	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr14	58839338	58839339	chr14:58839339:T:C	rs4898968	T	C	T	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr14	58878528	58878529	chr14:58878529:T:C	rs17833323	T	C	T	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr14	58942035	58942036	chr14:58942036:A:T	rs7154973	A	T	A	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr14	58980522	58980523	chr14:58980523:A:G	rs17095496	A	G	A	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr14	59061214	59061215	chr14:59061215:C:T	rs145846761	C	T	C	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr14	59159261	59159262	chr14:59159262:A:G	rs11158250	A	G	G	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr14	59273191	59273192	chr14:59273192:C:T	rs1008735	C	T	C	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr14	59282468	59282469	chr14:59282469:T:A	rs61986054	T	A	T	Hoxd9.mouse_homeodomain_1	4	1	+	7.212456609225008	0.3706381618944015	GCCATAAAG
chr14	59305573	59305574	chr14:59305574:C:T	rs941881	C	T	T	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr14	59346983	59346984	chr14:59346984:C:T	rs8008151	C	T	T	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr14	59376753	59376754	chr14:59376754:T:C	rs2349702	T	C	T	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr14	59377864	59377865	chr14:59377865:A:G	rs10146474	A	G	G	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr14	59377892	59377893	chr14:59377893:C:T	rs1253194	C	T	C	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr14	59580826	59580827	chr14:59580827:C:G	rs7143940	C	G	C	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr14	59584109	59584110	chr14:59584110:C:T	rs8014359	C	T	T	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr14	60435801	60435802	chr14:60435802:G:T	rs1254317	G	T	G	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr14	60486205	60486206	chr14:60486206:G:T	rs191590876	G	T	G	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr14	60721625	60721626	chr14:60721626:G:A	rs1013294799	G	A	G	Hoxd9.mouse_homeodomain_1	8	1	-	7.45645131454733	6.056505815123662	CCCATAAAC
chr14	60782900	60782901	chr14:60782901:A:T	rs75535113	A	T	A	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr14	60829028	60829029	chr14:60829029:G:C	rs79671183	G	C	G	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr14	61234924	61234925	chr14:61234925:G:A	rs868826	G	A	A	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr14	61330899	61330900	chr14:61330900:G:T	rs112472260	G	T	g	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr14	61503154	61503155	chr14:61503155:G:C	rs75238045	G	C	G	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr14	61503641	61503642	chr14:61503642:G:A	chr14:61503642:G:A	G	A	G	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr14	61518316	61518317	chr14:61518317:A:G	rs4312236	A	G	A	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr14	61541428	61541429	chr14:61541429:T:A	rs2246700	T	A	A	Hoxd9.mouse_homeodomain_1	5	1	+	8.099252595576761	8.678783717710262	GCCATTAAA
chr14	61616273	61616274	chr14:61616274:T:A	rs2253980	T	A	T	Hoxd9.mouse_homeodomain_1	5	1	-	7.889898683853121	7.3103675617196195	ACCATAAAA
chr14	61840864	61840865	chr14:61840865:A:G	rs55728068	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.287463081002919	6.953384481140425	CCAATAAAA
chr14	61984997	61984998	chr14:61984998:T:C	rs9285590	T	C	T	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr14	62526423	62526424	chr14:62526424:T:C	rs34197117	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.409487817756228	7.075409217893736	CCCATTAAA
chr14	62655369	62655370	chr14:62655370:T:G	rs945914281	T	G	T	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr14	63032482	63032483	chr14:63032483:C:A	rs75238674	C	A	C	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr14	63205252	63205253	chr14:63205253:G:T	rs3742628	G	T	T	Hoxd9.mouse_homeodomain_1	3	1	+	7.654940340027237	6.985537803081085	CCCGTAAAA
chr14	63205265	63205266	chr14:63205266:C:T	rs3742627	C	T	T	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr14	63329403	63329404	chr14:63329404:G:A	rs1271560	G	A	A	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr14	63436837	63436838	chr14:63436838:T:C	rs11846721	T	C	C	Hoxd9.mouse_homeodomain_1	3	1	-	7.9772278588234515	6.643149258960959	GCAATAAAA
chr14	63642101	63642102	chr14:63642102:C:T	rs531355613	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	-	8.099252595576761	7.3103675617196195	GCCATTAAA
chr14	63769284	63769285	chr14:63769285:C:T	rs34817779	C	T	T	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr14	63910829	63910830	chr14:63910830:C:T	rs7153036	C	T	T	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr14	63910864	63910865	chr14:63910865:C:T	rs35499091	C	T	T	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr14	64075291	64075292	chr14:64075292:A:G	rs571668069	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	7.241935125048919	5.907856525186427	CCCATACAA
chr14	64445698	64445699	chr14:64445699:C:T	rs1297539902	C	T	C	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr14	64495576	64495577	chr14:64495577:A:G	rs28730549	A	G	G	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr14	64540020	64540021	chr14:64540021:G:A	rs148306243	G	A	G	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr14	64540024	64540025	chr14:64540025:T:C	rs2045022	T	C	C	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr14	64540041	64540042	chr14:64540042:A:T	rs8011038	A	T	A	Hoxd9.mouse_homeodomain_1	7	1	+	7.889898683853121	6.1428148690123106	ACCATAAAA
chr14	64574083	64574084	chr14:64574084:G:A	rs8003734	G	A	A	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr14	64723255	64723256	chr14:64723256:G:C	rs1985465	G	C	G	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr14	64816123	64816124	chr14:64816124:G:C	rs74056034	G	C	G	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr14	64886913	64886914	chr14:64886914:A:G	rs1998333	A	G	A	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr14	64891857	64891858	chr14:64891858:C:T	rs1957425	C	T	T	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr14	65770049	65770050	chr14:65770050:G:A	rs75657340	G	A	G	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr14	65930290	65930291	chr14:65930291:T:C	rs35840280	T	C	T	Hoxd9.mouse_homeodomain_1	8	1	-	8.027213970992095	6.560886862506841	CACATAAAA
chr14	66013955	66013956	chr14:66013956:G:A	rs57649242	G	A	A	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr14	66022738	66022739	chr14:66022739:G:A	rs8004448	G	A	A	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr14	66038943	66038944	chr14:66038944:G:A	rs181780916	G	A	G	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr14	66039227	66039228	chr14:66039228:G:C	rs8016135	G	C	G	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr14	66056662	66056663	chr14:66056663:T:C	rs74056920	T	C	T	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr14	66063803	66063804	chr14:66063804:A:G	rs7143755	A	G	G	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr14	66524820	66524821	chr14:66524821:C:A	rs28659174	C	A	A	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr14	66576153	66576154	chr14:66576154:G:T	rs12590209	G	T	G	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr14	66974689	66974690	chr14:66974690:A:T	rs60550390	A	T	A	Hoxd9.mouse_homeodomain_1	5	1	+	8.027213970992095	7.447682848858594	CACATAAAA
chr14	67448037	67448038	chr14:67448038:T:C	rs7148501	T	C	C	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr14	67663787	67663788	chr14:67663788:G:A	rs540120449	G	A	G	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr14	67927336	67927337	chr14:67927337:G:A	rs12431697	G	A	A	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr14	67944142	67944143	chr14:67944143:G:T	rs568386998	G	T	G	Hoxd9.mouse_homeodomain_1	0	1	-	8.409487817756228	7.3103675617196195	CCCATTAAA
chr14	67944153	67944154	chr14:67944154:C:T	rs190532345	C	T	C	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr14	67965537	67965538	chr14:67965538:T:C	rs7160115	T	C	C	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr14	68166108	68166109	chr14:68166109:A:G	rs1958116	A	G	A	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr14	68282300	68282301	chr14:68282301:C:T	rs117941592	C	T	C	Hoxd9.mouse_homeodomain_1	3	1	-	7.075409217893736	8.409487817756228	CCCGTTAAA
chr14	68307613	68307614	chr14:68307614:T:A	rs3784105	T	A	T	Hoxd9.mouse_homeodomain_1	6	1	-	8.099252595576761	5.209836825546175	GCCATTAAA
chr14	68599079	68599080	chr14:68599080:G:T	rs113419425	G	T	G	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr14	68599091	68599092	chr14:68599092:G:T	rs111879068	G	T	G	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr14	68633373	68633374	chr14:68633374:T:C	rs571635036	T	C	T	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr14	68667546	68667547	chr14:68667547:A:G	rs767127	A	G	A	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr14	68686737	68686738	chr14:68686738:T:G	rs76182516	T	G	T	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr14	68696737	68696738	chr14:68696738:A:G	rs12886919	A	G	G	Hoxd9.mouse_homeodomain_1	8	1	+	7.889898683853121	6.423571575367866	ACCATAAAA
chr14	68723351	68723352	chr14:68723352:T:C	rs194781	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.889898683853121	6.555820083990628	ACCATAAAA
chr14	68727889	68727890	chr14:68727890:C:G	rs10483821	C	G	C	Hoxd9.mouse_homeodomain_1	6	1	+	7.241935125048919	2.285192993297999	CCCATACAA
chr14	68732461	68732462	chr14:68732462:A:G	rs17106229	A	G	A	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr14	68792123	68792124	chr14:68792124:C:G	rs927292	C	G	G	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr14	68857728	68857729	chr14:68857729:A:C	rs372896	A	C	N	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr14	68911432	68911433	chr14:68911433:A:C	rs12434443	A	C	C	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr14	68911578	68911579	chr14:68911579:G:T	rs2070279	G	T	T	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr14	68937988	68937989	chr14:68937989:C:G	rs1265321407	C	G	C	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr14	68939473	68939474	chr14:68939474:C:T	rs2300876	C	T	C	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr14	68939767	68939768	chr14:68939768:A:C	rs78729034	A	C	A	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr14	69001657	69001658	chr14:69001658:C:T	rs242097	C	T	T	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr14	69133871	69133872	chr14:69133872:T:G	rs138717449	T	G	T	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr14	69280173	69280174	chr14:69280174:C:T	rs8005903	C	T	T	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr14	69514890	69514891	chr14:69514891:C:A	rs8012292	C	A	A	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr14	69518780	69518781	chr14:69518781:G:A	rs4899298	G	A	G	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr14	69643550	69643551	chr14:69643551:A:G	rs17107164	A	G	A	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr14	69654555	69654556	chr14:69654556:A:G	rs79365473	A	G	A	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr14	69814952	69814953	chr14:69814953:A:T	rs11628423	A	T	A	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr14	70186840	70186841	chr14:70186841:C:G	rs572130123	C	G	c	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr14	70188972	70188973	chr14:70188973:G:A	rs537378447	G	A	G	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr14	70189004	70189005	chr14:70189005:A:G	rs117600495	A	G	A	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr14	70190535	70190536	chr14:70190536:C:A	rs6573935	C	A	C	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr14	70317004	70317005	chr14:70317005:C:T	rs8020966	C	T	C	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr14	70755725	70755726	chr14:70755726:T:C	rs2877693	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.409487817756228	7.075409217893736	CCCATTAAA
chr14	70755745	70755746	chr14:70755746:G:C	rs148412963	G	C	G	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr14	70808431	70808432	chr14:70808432:G:C	rs541191917	G	C	G	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr14	70896313	70896314	chr14:70896314:G:A	rs2189807	G	A	A	Hoxd9.mouse_homeodomain_1	0	1	+	7.1462160923678635	6.357331058510722	GCCATAAAC
chr14	70982876	70982877	chr14:70982877:C:T	rs34731365	C	T	C	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr14	71021936	71021937	chr14:71021937:G:A	rs7153237	G	A	A	Hoxd9.mouse_homeodomain_1	1	1	-	7.9772278588234515	6.662425944490444	GCAATAAAA
chr14	71022663	71022664	chr14:71022664:T:A	rs75236380	T	A	T	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr14	71060505	71060506	chr14:71060506:A:G	rs7152845	A	G	G	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr14	71163008	71163009	chr14:71163009:A:C	rs8005241	A	C	A	Hoxd9.mouse_homeodomain_1	6	1	+	7.1462160923678635	5.399132277527052	GCCATAAAC
chr14	71166140	71166141	chr14:71166141:C:A	rs4485279	C	A	A	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr14	71190830	71190831	chr14:71190831:A:T	rs11850268	A	T	T	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr14	71231898	71231899	chr14:71231899:C:A	rs7156194	C	A	C	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr14	71372709	71372710	chr14:71372710:T:A	rs1344220156	T	A	T	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr14	71416370	71416371	chr14:71416371:G:T	rs12894016	G	T	G	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr14	71489423	71489424	chr14:71489424:A:C	rs14030	A	C	C	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr14	71521539	71521540	chr14:71521540:A:G	rs79051611	A	G	A	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr14	71780238	71780239	chr14:71780239:C:G	rs768948460	C	G	C	Hoxd9.mouse_homeodomain_1	8	1	+	7.1462160923678635	7.212456609225008	GCCATAAAC
chr14	71853749	71853750	chr14:71853750:T:C	rs12896381	T	C	T	Hoxd9.mouse_homeodomain_1	5	1	-	8.287463081002919	1.9132733627563638	CCAATAAAA
chr14	72024983	72024984	chr14:72024984:C:T	rs8022882	C	T	C	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr14	72453898	72453899	chr14:72453899:C:T	rs4903024	C	T	C	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr14	72483659	72483660	chr14:72483660:T:C	rs917427	T	C	C	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr14	72545176	72545177	chr14:72545177:A:G	rs2239222	A	G	G	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr14	72556948	72556949	chr14:72556949:C:T	rs7141877	C	T	T	Hoxd9.mouse_homeodomain_1	2	1	+	8.027213970992095	1.5397735133684596	CACATAAAA
chr14	72603946	72603947	chr14:72603947:T:C	rs7160623	T	C	T	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr14	72779717	72779718	chr14:72779718:C:A	rs11622025	C	A	C	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr14	72786367	72786368	chr14:72786368:C:G	rs186303525	C	G	C	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr14	72866185	72866186	chr14:72866186:C:T	rs17181986	C	T	C	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr14	72903065	72903066	chr14:72903066:C:T	rs12893691	C	T	C	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr14	72903189	72903190	chr14:72903190:G:A	rs80189309	G	A	G	Hoxd9.mouse_homeodomain_1	0	1	+	7.34470511784777	6.555820083990628	GCCGTAAAA
chr14	72955550	72955551	chr14:72955551:C:G	rs3815460	C	G	C	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr14	73007904	73007905	chr14:73007905:C:T	rs2806057	C	T	C	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr14	73057595	73057596	chr14:73057596:C:A	rs74062639	C	A	C	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr14	73284018	73284019	chr14:73284019:G:A	rs3742821	G	A	G	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr14	73374427	73374428	chr14:73374428:T:C	rs61985811	T	C	T	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr14	73582778	73582779	chr14:73582779:G:C	rs60396253	G	C	G	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr14	74016640	74016641	chr14:74016641:C:A	rs55714624	C	A	C	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr14	74108210	74108211	chr14:74108211:C:A	chr14:74108211:C:A	C	A	C	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr14	74142715	74142716	chr14:74142716:T:C	rs12589973	T	C	T	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr14	74143394	74143395	chr14:74143395:C:G	rs12883476	C	G	c	Hoxd9.mouse_homeodomain_1	0	1	+	8.287463081002919	7.9772278588234515	CCAATAAAA
chr14	74169982	74169983	chr14:74169983:A:G	rs2358629	A	G	A	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr14	74303195	74303196	chr14:74303196:T:A	rs72542405	T	A	A	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr14	74570512	74570513	chr14:74570513:A:G	rs376093157	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	7.1462160923678635	5.81213749250537	GCCATAAAC
chr14	74649183	74649184	chr14:74649184:G:A	rs4508370	G	A	g	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr14	74652592	74652593	chr14:74652593:C:T	rs888418	C	T	c	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr14	74698613	74698614	chr14:74698614:A:G	rs10138739	A	G	A	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr14	74841605	74841606	chr14:74841606:C:T	rs111879555	C	T	C	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr14	75022928	75022929	chr14:75022929:C:T	rs175057	C	T	T	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr14	75602683	75602684	chr14:75602684:G:A	rs57021903	G	A	G	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr14	75826381	75826382	chr14:75826382:C:A	rs76017154	C	A	C	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr14	75938954	75938955	chr14:75938955:A:G	rs2019207	A	G	G	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr14	75947710	75947711	chr14:75947711:A:G	rs8015828	A	G	G	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr14	75980177	75980178	chr14:75980178:T:G	rs3917148	T	G	T	Hoxd9.mouse_homeodomain_1	7	1	-	7.212456609225008	4.323040839194422	GCCATAAAG
chr14	76329507	76329508	chr14:76329508:A:G	rs753334	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	7.45645131454733	6.122372714684838	CCCATAAAC
chr14	76390035	76390036	chr14:76390036:G:A	rs28533060	G	A	G	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr14	76713616	76713617	chr14:76713617:G:T	rs12433663	G	T	G	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr14	76715088	76715089	chr14:76715089:T:G	rs11159226	T	G	T	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr14	76721377	76721378	chr14:76721378:A:G	rs61991183	A	G	A	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr14	77053287	77053288	chr14:77053288:C:T	rs141315924	C	T	C	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr14	77076098	77076099	chr14:77076099:A:G	rs78977163	A	G	A	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr14	77294668	77294669	chr14:77294669:C:T	rs2363638	C	T	C	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr14	77314075	77314076	chr14:77314076:G:A	rs75264088	G	A	G	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr14	77334726	77334727	chr14:77334727:C:T	rs78107220	C	T	C	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr14	77470673	77470674	chr14:77470674:T:C	rs11159264	T	C	C	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr14	77572118	77572119	chr14:77572119:G:A	rs4903607	G	A	G	Hoxd9.mouse_homeodomain_1	8	1	+	7.212456609225008	8.678783717710262	GCCATAAAG
chr14	77663460	77663461	chr14:77663461:G:C	rs8019042	G	C	G	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr14	77663490	77663491	chr14:77663491:C:T	rs8018802	C	T	C	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr14	77663496	77663497	chr14:77663497:T:G	rs28541608	T	G	T	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr14	77917682	77917683	chr14:77917683:T:C	rs4899681	T	C	C	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr14	78075961	78075962	chr14:78075962:T:C	rs2365351	T	C	T	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr14	78089050	78089051	chr14:78089051:A:G	rs79224743	A	G	A	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr14	78097469	78097470	chr14:78097470:C:T	rs34449081	C	T	C	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr14	79011331	79011332	chr14:79011332:T:C	rs912247511	T	C	T	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr14	79137899	79137900	chr14:79137900:A:T	rs8007608	A	T	A	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr14	79442920	79442921	chr14:79442921:T:A	rs560565319	T	A	T	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr14	79795398	79795399	chr14:79795399:G:C	rs1003814	G	C	C	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr14	79825249	79825250	chr14:79825250:T:C	rs1159039	T	C	T	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr14	79896238	79896239	chr14:79896239:T:A	rs12892107	T	A	T	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr14	80450733	80450734	chr14:80450734:C:G	rs10138515	C	G	G	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr14	80621304	80621305	chr14:80621305:A:G	rs17110868	A	G	A	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr14	80987517	80987518	chr14:80987518:A:G	rs72693081	A	G	A	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr14	81169543	81169544	chr14:81169544:C:T	rs9646167	C	T	C	Hoxd9.mouse_homeodomain_1	2	1	+	7.716978748812629	1.2295382911889927	GACATAAAA
chr14	81312299	81312300	chr14:81312300:G:A	rs6574644	G	A	G	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr14	81331995	81331996	chr14:81331996:C:T	rs61978922	C	T	C	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr14	81668625	81668626	chr14:81668626:C:T	rs143760922	C	T	C	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr14	82010286	82010287	chr14:82010287:A:G	rs922392735	A	G	A	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr14	82029032	82029033	chr14:82029033:G:T	rs1769429	G	T	G	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr14	82075660	82075661	chr14:82075661:C:T	rs60790718	C	T	C	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr14	82104611	82104612	chr14:82104612:A:G	rs11626408	A	G	A	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr14	83133665	83133666	chr14:83133666:C:T	rs2210174	C	T	T	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr14	83799477	83799478	chr14:83799478:A:G	rs17636698	A	G	G	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr14	83848396	83848397	chr14:83848397:T:C	rs1705632	T	C	C	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr14	83867058	83867059	chr14:83867059:C:T	rs10484117	C	T	C	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr14	84215599	84215600	chr14:84215600:T:C	rs10873355	T	C	C	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr14	84215600	84215601	chr14:84215601:G:A	rs10873356	G	A	G	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr14	84404676	84404677	chr14:84404677:T:A	rs7147801	T	A	T	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr14	84584590	84584591	chr14:84584591:T:C	rs12884141	T	C	C	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr14	84716341	84716342	chr14:84716342:T:A	rs7146382	T	A	T	Hoxd9.mouse_homeodomain_1	8	1	-	8.287463081002919	5.354949956236852	CCAATAAAA
chr14	84885409	84885410	chr14:84885410:A:C	rs12881403	A	C	A	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr14	85399074	85399075	chr14:85399075:A:C	rs10130907	A	C	C	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr14	85439794	85439795	chr14:85439795:T:C	rs11849777	T	C	T	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr14	85443691	85443692	chr14:85443692:A:G	rs1289415	A	G	G	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr14	85517502	85517503	chr14:85517503:A:C	rs4899872	A	C	A	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr14	85572042	85572043	chr14:85572043:C:T	rs74431728	C	T	C	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr14	85607754	85607755	chr14:85607755:G:A	rs142081136	G	A	G	Hoxd9.mouse_homeodomain_1	2	1	-	8.027213970992095	1.5397735133684596	CACATAAAA
chr14	85949263	85949264	chr14:85949264:G:A	rs10139880	G	A	G	Hoxd9.mouse_homeodomain_1	0	1	-	7.522691831404475	5.628144526095533	CCCATAAAG
chr14	86333519	86333520	chr14:86333520:T:C	rs72696717	T	C	C	Hoxd9.mouse_homeodomain_1	4	1	+	7.716978748812629	5.061932103950051	GACATAAAA
chr14	86655023	86655024	chr14:86655024:C:G	rs61986774	C	G	C	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr14	86655024	86655025	chr14:86655025:A:G	rs61986775	A	G	A	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr14	86912935	86912936	chr14:86912936:G:A	rs17187115	G	A	G	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr14	86938476	86938477	chr14:86938477:C:T	rs56096684	C	T	C	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr14	87010247	87010248	chr14:87010248:A:C	rs1420813	A	C	A	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr14	87175492	87175493	chr14:87175493:T:A	rs1682522	T	A	T	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr14	87309905	87309906	chr14:87309906:G:A	rs901007	G	A	G	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr14	87945006	87945007	chr14:87945007:C:A	rs2896069	C	A	C	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr14	87945028	87945029	chr14:87945029:A:G	rs429923	A	G	A	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr14	88346282	88346283	chr14:88346283:G:C	rs114070082	G	C	G	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr14	88352458	88352459	chr14:88352459:C:T	rs4904446	C	T	T	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr14	89041270	89041271	chr14:89041271:G:T	chr14:89041271:G:T	G	T	G	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr14	89041313	89041314	chr14:89041314:T:C	chr14:89041314:T:C	T	C	T	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr14	89088367	89088368	chr14:89088368:A:C	chr14:89088368:A:C	A	C	A	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr14	89206907	89206908	chr14:89206908:T:A	rs997897	T	A	T	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr14	89253966	89253967	chr14:89253967:G:C	rs7153829	G	C	C	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr14	89268534	89268535	chr14:89268535:T:C	rs8007023	T	C	T	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr14	89304760	89304761	chr14:89304761:A:G	rs2110702	A	G	A	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr14	89416333	89416334	chr14:89416334:T:C	rs74507807	T	C	T	Hoxd9.mouse_homeodomain_1	2	1	-	8.287463081002919	5.5210272824374	CCAATAAAA
chr14	89590743	89590744	chr14:89590744:G:A	rs243169	G	A	G	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr14	89648925	89648926	chr14:89648926:G:A	rs2761358	G	A	G	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr14	89695731	89695732	chr14:89695732:A:G	rs114505697	A	G	A	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr14	89721899	89721900	chr14:89721900:C:T	rs61997647	C	T	C	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr14	89810377	89810378	chr14:89810378:T:C	rs1111761	T	C	t	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr14	89925541	89925542	chr14:89925542:A:G	rs56034277	A	G	G	Hoxd9.mouse_homeodomain_1	4	1	-	8.409487817756228	5.7544411728936495	CCCATTAAA
chr14	90088413	90088414	chr14:90088414:C:A	rs1023603351	C	A	C	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr14	90305163	90305164	chr14:90305164:A:C	rs72699173	A	C	a	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr14	90356136	90356137	chr14:90356137:T:C	rs12590712	T	C	C	Hoxd9.mouse_homeodomain_1	5	1	-	8.98901893988973	2.6148292216431743	CCCATAAAA
chr14	90402097	90402098	chr14:90402098:G:A	rs2300502	G	A	A	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr14	90467541	90467542	chr14:90467542:A:G	rs1296096	A	G	G	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr14	90528125	90528126	chr14:90528126:T:C	rs77140756	T	C	T	Hoxd9.mouse_homeodomain_1	4	1	+	7.241935125048919	4.5868884801863405	CCCATACAA
chr14	90665903	90665904	chr14:90665904:T:C	rs115250645	T	C	T	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr14	90693157	90693158	chr14:90693158:T:C	rs34328807	T	C	T	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr14	90739645	90739646	chr14:90739646:A:G	rs371267630	A	G	A	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr14	90767390	90767391	chr14:90767391:C:T	rs8003019	C	T	T	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr14	90777896	90777897	chr14:90777897:G:A	rs28664979	G	A	A	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr14	90833481	90833482	chr14:90833482:T:G	rs7147691	T	G	T	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr14	90833484	90833485	chr14:90833485:T:C	rs10144731	T	C	T	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr14	91078455	91078456	chr14:91078456:A:T	rs74614904	A	T	A	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr14	91284168	91284169	chr14:91284169:G:C	rs6575188	G	C	C	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr14	91325558	91325559	chr14:91325559:C:G	rs77825968	C	G	C	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr14	91325565	91325566	chr14:91325566:G:A	rs61988403	G	A	G	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr14	91371178	91371179	chr14:91371179:T:C	rs114155417	T	C	T	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr14	91401855	91401856	chr14:91401856:C:G	rs7157901	C	G	C	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr14	91409831	91409832	chr14:91409832:T:G	rs61988442	T	G	T	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr14	91510769	91510770	chr14:91510770:G:C	rs187034846	G	C	G	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr14	91510782	91510783	chr14:91510783:G:C	rs116068625	G	C	G	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr14	91510801	91510802	chr14:91510802:C:T	rs573190244	C	T	C	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr14	91728790	91728791	chr14:91728791:A:G	rs142539442	A	G	A	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr14	91728837	91728838	chr14:91728838:G:A	rs11621684	G	A	G	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr14	91872524	91872525	chr14:91872525:C:G	rs2498848	C	G	C	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr14	91996152	91996153	chr14:91996153:T:C	rs10083510	T	C	C	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr14	92342229	92342230	chr14:92342230:G:A	rs113943201	G	A	G	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr14	92454078	92454079	chr14:92454079:C:A	rs17783624	C	A	C	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr14	92472731	92472732	chr14:92472732:G:A	rs4900126	G	A	G	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr14	92500180	92500181	chr14:92500181:C:T	rs80267699	C	T	c	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr14	92542740	92542741	chr14:92542741:G:A	rs8022749	G	A	A	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr14	92558654	92558655	chr14:92558655:A:G	rs2146500	A	G	G	Hoxd9.mouse_homeodomain_1	3	1	+	8.287463081002919	6.953384481140425	CCAATAAAA
chr14	92720021	92720022	chr14:92720022:A:G	rs79926401	A	G	c	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr14	92914406	92914407	chr14:92914407:G:A	rs77881984	G	A	G	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr14	93073523	93073524	chr14:93073524:G:T	rs77296296	G	T	G	Hoxd9.mouse_homeodomain_1	0	1	+	8.099252595576761	6.514940512447287	GCCATTAAA
chr14	93249641	93249642	chr14:93249642:C:G	rs8017942	C	G	G	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr14	93333829	93333830	chr14:93333830:T:C	rs7155081	T	C	T	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr14	93337235	93337236	chr14:93337236:A:G	rs77458550	A	G	G	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr14	93533773	93533774	chr14:93533774:T:A	rs7151015	T	A	T	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr14	93534137	93534138	chr14:93534138:T:G	rs4905076	T	G	T	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr14	93822513	93822514	chr14:93822514:T:C	rs77934352	T	C	T	Hoxd9.mouse_homeodomain_1	5	1	-	8.98901893988973	2.6148292216431743	CCCATAAAA
chr14	93827303	93827304	chr14:93827304:A:G	rs911291	A	G	G	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr14	93915946	93915947	chr14:93915947:T:A	rs76058617	T	A	T	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr14	93963404	93963405	chr14:93963405:A:G	rs4905121	A	G	G	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr14	93978440	93978441	chr14:93978441:A:G	rs2180086	A	G	G	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr14	94049064	94049065	chr14:94049065:C:T	rs112083293	C	T	C	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr14	94100954	94100955	chr14:94100955:A:G	rs143789009	A	G	A	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr14	94105431	94105432	chr14:94105432:A:G	rs941479	A	G	A	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr14	94105461	94105462	chr14:94105462:C:T	rs12589978	C	T	T	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr14	94172072	94172073	chr14:94172073:A:T	rs537246777	A	T	A	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr14	94387341	94387342	chr14:94387342:C:A	rs3748317	C	A	C	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr14	94646075	94646076	chr14:94646076:A:G	rs10143303	A	G	G	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr14	94678187	94678188	chr14:94678188:C:T	rs72696865	C	T	C	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr14	94864606	94864607	chr14:94864607:T:C	rs980663465	T	C	T	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr14	94868249	94868250	chr14:94868250:A:G	rs6575468	A	G	A	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr14	94894728	94894729	chr14:94894729:C:A	rs12435646	C	A	C	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr14	94936514	94936515	chr14:94936515:A:G	chr14:94936515:A:G	A	G	A	Hoxd9.mouse_homeodomain_1	5	1	+	8.98901893988973	2.6148292216431743	CCCATAAAA
chr14	95155424	95155425	chr14:95155425:T:C	rs112438149	T	C	T	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr14	95354526	95354527	chr14:95354527:T:G	rs7150222	T	G	G	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr14	95395175	95395176	chr14:95395176:C:A	rs1074925	C	A	C	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr14	95402772	95402773	chr14:95402773:G:A	rs72692728	G	A	G	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr14	95477210	95477211	chr14:95477211:T:C	rs8020368	T	C	C	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr14	95567189	95567190	chr14:95567190:G:C	rs8011099	G	C	c	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr14	95588083	95588084	chr14:95588084:G:A	rs10132894	G	A	A	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr14	95621712	95621713	chr14:95621713:A:G	rs8021788	A	G	A	Hoxd9.mouse_homeodomain_1	8	1	+	8.287463081002919	6.821135972517665	CCAATAAAA
chr14	95774388	95774389	chr14:95774389:C:T	rs77539504	C	T	C	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr14	95835324	95835325	chr14:95835325:A:C	rs4905400	A	C	A	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr14	95885325	95885326	chr14:95885326:A:G	rs140819292	A	G	A	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr14	95950434	95950435	chr14:95950435:G:A	rs6575556	G	A	A	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr14	96187717	96187718	chr14:96187718:A:G	rs56152739	A	G	A	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr14	96228630	96228631	chr14:96228631:A:G	rs945037	A	G	A	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr14	96246866	96246867	chr14:96246867:G:A	rs2242976	G	A	G	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr14	96630147	96630148	chr14:96630148:G:A	rs12590511	G	A	g	Hoxd9.mouse_homeodomain_1	8	1	+	7.522691831404475	8.98901893988973	CCCATAAAG
chr14	96637451	96637452	chr14:96637452:C:T	rs73357018	C	T	c	Hoxd9.mouse_homeodomain_1	2	1	+	7.212456609225008	0.7250161516013711	GCCATAAAG
chr14	96637469	96637470	chr14:96637470:G:A	rs17094273	G	A	g	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr14	96668583	96668584	chr14:96668584:C:T	rs8014554	C	T	C	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr14	96741807	96741808	chr14:96741808:C:T	rs10146854	C	T	C	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr14	96749969	96749970	chr14:96749970:C:T	rs77832448	C	T	C	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr14	96749990	96749991	chr14:96749991:G:A	rs4900341	G	A	G	Hoxd9.mouse_homeodomain_1	1	1	-	7.091711387329735	5.776909472996728	CCCATCAAA
chr14	97107510	97107511	chr14:97107511:A:G	rs11626094	A	G	A	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr14	97174441	97174442	chr14:97174442:C:T	rs61980128	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	+	7.45645131454733	5.561904009238388	CCCATAAAC
chr14	97174448	97174449	chr14:97174449:A:C	rs6575615	A	C	C	Hoxd9.mouse_homeodomain_1	7	1	+	7.45645131454733	4.567035544516743	CCCATAAAC
chr14	97224215	97224216	chr14:97224216:T:C	rs9671481	T	C	C	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr14	97839218	97839219	chr14:97839219:G:T	rs113144628	G	T	G	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr14	97839235	97839236	chr14:97839236:C:G	rs73373954	C	G	C	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr14	97839236	97839237	chr14:97839237:G:A	rs77228144	G	A	G	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr14	97942017	97942018	chr14:97942018:A:G	rs78393732	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.099252595576761	6.765173995714267	GCCATTAAA
chr14	98019102	98019103	chr14:98019103:G:C	rs11160429	G	C	G	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr14	98092591	98092592	chr14:98092592:T:C	rs188284577	T	C	T	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr14	98109632	98109633	chr14:98109633:G:T	rs1461576	G	T	G	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr14	98170783	98170784	chr14:98170784:A:C	rs7159904	A	C	A	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr14	98170786	98170787	chr14:98170787:G:A	rs7160371	G	A	g	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr14	98564301	98564302	chr14:98564302:G:A	rs17097313	G	A	G	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr14	98639469	98639470	chr14:98639470:T:C	rs11852072	T	C	T	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr14	98666071	98666072	chr14:98666072:G:T	rs12586193	G	T	G	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr14	99132881	99132882	chr14:99132882:C:T	rs116633931	C	T	c	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr14	99184250	99184251	chr14:99184251:C:T	rs74080338	C	T	C	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr14	99230264	99230265	chr14:99230265:A:G	rs115645183	A	G	A	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr14	99272795	99272796	chr14:99272796:A:G	rs75136861	A	G	A	Hoxd9.mouse_homeodomain_1	4	1	-	7.889898683853121	5.234852038990543	ACCATAAAA
chr14	99324828	99324829	chr14:99324829:C:T	rs67846882	C	T	C	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr14	99327589	99327590	chr14:99327590:C:T	rs534255153	C	T	C	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr14	99751944	99751945	chr14:99751945:G:C	rs10148112	G	C	G	Hoxd9.mouse_homeodomain_1	2	1	-	7.654940340027237	4.186948682574907	CCCGTAAAA
chr14	99772675	99772676	chr14:99772676:A:T	rs66546610	A	T	A	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr14	99788782	99788783	chr14:99788783:G:C	rs1967760	G	C	C	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr14	99810675	99810676	chr14:99810676:A:G	rs72708374	A	G	A	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr14	99881285	99881286	chr14:99881286:C:A	rs781771584	C	A	C	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr14	99885409	99885410	chr14:99885410:C:T	rs150240269	C	T	C	Hoxd9.mouse_homeodomain_1	1	1	+	7.889898683853121	6.575096769520114	ACCATAAAA
chr14	100025216	100025217	chr14:100025217:A:G	rs201234591	A	G	A	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr14	100049440	100049441	chr14:100049441:A:G	rs4900453	A	G	A	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr14	100533510	100533511	chr14:100533511:G:A	rs10135979	G	A	G	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr14	100570664	100570665	chr14:100570665:A:G	rs73352966	A	G	A	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr14	100570690	100570691	chr14:100570691:T:C	rs78154681	T	C	T	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr14	100604197	100604198	chr14:100604198:G:A	rs873077	G	A	G	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr14	100604221	100604222	chr14:100604222:A:G	rs873076	A	G	A	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr14	100819823	100819824	chr14:100819824:A:C	rs35506717	A	C	C	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr14	100849649	100849650	chr14:100849650:C:T	rs780308110	C	T	C	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr14	100915226	100915227	chr14:100915227:A:G	rs1956125	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.98901893988973	7.654940340027237	CCCATAAAA
chr14	101088130	101088131	chr14:101088131:C:G	rs56741851	C	G	C	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr14	101088161	101088162	chr14:101088162:G:A	rs76612553	G	A	A	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr14	101088441	101088442	chr14:101088442:G:C	rs72700600	G	C	G	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr14	101196478	101196479	chr14:101196479:C:T	rs59474957	C	T	C	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr14	101196501	101196502	chr14:101196502:C:T	rs562357578	C	T	C	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr14	101199431	101199432	chr14:101199432:A:C	rs7143212	A	C	C	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr14	101291472	101291473	chr14:101291473:C:T	rs9671810	C	T	C	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr14	101349033	101349034	chr14:101349034:T:C	rs117817314	T	C	T	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr14	101360129	101360130	chr14:101360130:A:T	rs186420492	A	T	A	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr14	101495330	101495331	chr14:101495331:A:G	rs11623903	A	G	A	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr14	101552819	101552820	chr14:101552820:A:C	rs12147061	A	C	C	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr14	101552834	101552835	chr14:101552835:T:G	rs527369406	T	G	T	Hoxd9.mouse_homeodomain_1	4	1	+	7.45645131454733	0.614632867216724	CCCATAAAC
chr14	101552840	101552841	chr14:101552841:C:A	rs12147069	C	A	C	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr14	101552853	101552854	chr14:101552854:T:A	rs77446871	T	A	T	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr14	101897668	101897669	chr14:101897669:G:C	rs8005273	G	C	G	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr14	102194572	102194573	chr14:102194573:C:T	rs555363702	C	T	c	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr14	102215201	102215202	chr14:102215202:G:A	rs12883965	G	A	G	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr14	102317932	102317933	chr14:102317933:G:C	rs72698579	G	C	G	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr14	102317936	102317937	chr14:102317937:G:C	rs12878795	G	C	G	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr14	102471641	102471642	chr14:102471642:T:C	rs115587836	T	C	C	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr14	102591297	102591298	chr14:102591298:C:T	rs4906230	C	T	C	Hoxd9.mouse_homeodomain_1	2	1	+	7.889898683853121	1.4024582262294842	ACCATAAAA
chr14	102795937	102795938	chr14:102795938:C:T	rs78592775	C	T	C	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr14	102891732	102891733	chr14:102891733:A:C	rs72704731	A	C	A	Hoxd9.mouse_homeodomain_1	4	1	-	8.287463081002919	1.445644633672313	CCAATAAAA
chr14	103151938	103151939	chr14:103151939:A:T	rs875799	A	T	T	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr14	103163576	103163577	chr14:103163577:A:G	rs2403137	A	G	G	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr14	103234046	103234047	chr14:103234047:C:T	rs11160734	C	T	C	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr14	103286621	103286622	chr14:103286622:A:G	rs11621255	A	G	A	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr14	103500064	103500065	chr14:103500065:T:C	rs45462294	T	C	T	Hoxd9.mouse_homeodomain_1	0	1	-	7.889898683853121	8.678783717710262	ACCATAAAA
chr14	103707627	103707628	chr14:103707628:G:A	rs78815073	G	A	A	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr14	103749647	103749648	chr14:103749648:C:T	rs3818085	C	T	T	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr14	103749664	103749665	chr14:103749665:A:T	rs115520117	A	T	A	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr14	103896984	103896985	chr14:103896985:G:T	rs11160771	G	T	G	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr14	104012963	104012964	chr14:104012964:G:A	rs12895187	G	A	G	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr14	104091562	104091563	chr14:104091563:G:A	rs1305959075	G	A	G	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr14	104094881	104094882	chr14:104094882:G:C	rs1022525296	G	C	G	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr14	104202252	104202253	chr14:104202253:C:T	rs77602211	C	T	C	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr14	104276001	104276002	chr14:104276002:T:C	rs4483795	T	C	C	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr14	104283919	104283920	chr14:104283920:G:A	rs139014709	G	A	G	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr14	104291930	104291931	chr14:104291931:A:C	chr14:104291931:A:C	A	C	A	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr14	104291931	104291932	chr14:104291932:C:T	rs79992846	C	T	T	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr14	104316134	104316135	chr14:104316135:A:G	rs7151513	A	G	A	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr14	104389917	104389918	chr14:104389918:G:C	rs28663652	G	C	G	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr14	104427508	104427509	chr14:104427509:G:A	rs544890622	G	A	G	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr14	104549794	104549795	chr14:104549795:A:G	rs28559773	A	G	a	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr14	104564486	104564487	chr14:104564487:G:A	rs28402960	G	A	G	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr14	104717931	104717932	chr14:104717932:T:A	rs7157045	T	A	T	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr14	104724194	104724195	chr14:104724195:G:C	rs539976868	G	C	G	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr14	104724206	104724207	chr14:104724207:T:C	rs556490247	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.099252595576761	6.765173995714267	GCCATTAAA
chr14	104724221	104724222	chr14:104724222:C:T	rs962261994	C	T	C	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr14	104930932	104930933	chr14:104930933:C:A	rs143703446	C	A	C	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr14	105836779	105836780	chr14:105836780:T:C	rs10136401	T	C	.	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr14	106302792	106302793	chr14:106302793:C:G	rs17112633	C	G	.	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr14	106649951	106649952	chr14:106649952:G:C	rs2516883	G	C	c	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr14	106708609	106708610	chr14:106708610:G:A	rs7142264	G	A	.	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr14	106708648	106708649	chr14:106708649:T:A	rs7143287	T	A	.	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr14	106787729	106787730	chr14:106787730:G:A	rs10136817	G	A	.	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr14	106841951	106841952	chr14:106841952:T:C	rs2337454	T	C	.	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr15	17025742	17025743	chr15:17025743:C:T	rs1041395824	C	T	.	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr15	17459026	17459027	chr15:17459027:G:C	rs1213013372	G	C	.	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr15	20235224	20235225	chr15:20235225:G:A	rs6599878	G	A	.	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr15	20364727	20364728	chr15:20364728:G:A	rs8023877	G	A	.	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr15	20663971	20663972	chr15:20663972:A:G	rs62000592	A	G	A	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr15	22285921	22285922	chr15:22285922:C:G	rs4570792	C	G	C	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr15	22945900	22945901	chr15:22945901:C:T	rs11634023	C	T	T	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr15	22945925	22945926	chr15:22945926:C:T	rs117062858	C	T	C	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr15	23036235	23036236	chr15:23036236:C:T	rs183224682	C	T	c	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr15	23868853	23868854	chr15:23868854:C:T	chr15:23868854:C:T	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	-	7.9772278588234515	7.188342824966311	GCAATAAAA
chr15	23913062	23913063	chr15:23913063:C:T	rs12440005	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	-	7.9772278588234515	7.188342824966311	GCAATAAAA
chr15	24106563	24106564	chr15:24106564:A:G	rs58982745	A	G	a	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr15	24148014	24148015	chr15:24148015:A:G	rs2883346	A	G	g	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr15	24177712	24177713	chr15:24177713:A:G	rs12439964	A	G	-	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr15	24241407	24241408	chr15:24241408:A:G	rs10459730	A	G	-	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr15	24241427	24241428	chr15:24241428:C:A	rs10459731	C	A	-	Hoxd9.mouse_homeodomain_1	8	1	-	7.212456609225008	5.746270592944195	GCCATAAAG
chr15	24393355	24393356	chr15:24393356:T:C	rs8032162	T	C	c	Hoxd9.mouse_homeodomain_1	3	1	-	7.522691831404475	6.188613231541982	CCCATAAAG
chr15	24951480	24951481	chr15:24951481:T:A	rs12898534	T	A	T	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr15	25012735	25012736	chr15:25012736:A:G	rs117277109	A	G	G	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr15	25439785	25439786	chr15:25439786:A:T	rs74946267	A	T	A	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr15	25473727	25473728	chr15:25473728:C:T	rs7496451	C	T	C	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr15	25568324	25568325	chr15:25568325:G:C	rs4906722	G	C	G	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr15	25720057	25720058	chr15:25720058:C:T	chr15:25720058:C:T	C	T	C	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr15	25849552	25849553	chr15:25849553:C:T	rs573751670	C	T	C	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr15	25971405	25971406	chr15:25971406:A:G	rs7172649	A	G	A	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr15	25971409	25971410	chr15:25971410:A:G	rs7172651	A	G	A	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr15	25971418	25971419	chr15:25971419:A:G	rs7172658	A	G	G	Hoxd9.mouse_homeodomain_1	3	1	+	8.678783717710262	7.34470511784777	GCCATAAAA
chr15	26081244	26081245	chr15:26081245:C:T	rs74007219	C	T	T	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr15	26084017	26084018	chr15:26084018:A:G	rs111641546	A	G	A	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr15	26571440	26571441	chr15:26571441:C:A	rs4906680	C	A	C	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr15	26622138	26622139	chr15:26622139:G:A	rs17646626	G	A	G	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr15	26925752	26925753	chr15:26925753:G:A	rs1048907384	G	A	G	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr15	27263714	27263715	chr15:27263715:A:G	rs8041079	A	G	G	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr15	27687180	27687181	chr15:27687181:C:T	rs13329242	C	T	c	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr15	27687184	27687185	chr15:27687185:A:G	rs4536416	A	G	A	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr15	27846594	27846595	chr15:27846595:G:T	chr15:27846595:G:T	G	T	G	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr15	28030884	28030885	chr15:28030885:C:T	rs4778231	C	T	C	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr15	28203616	28203617	chr15:28203617:C:A	rs186293966	C	A	.	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr15	28933681	28933682	chr15:28933682:G:T	rs8025972	G	T	G	Hoxd9.mouse_homeodomain_1	1	1	-	8.287463081002919	7.325658112105286	CCAATAAAA
chr15	28955265	28955266	chr15:28955266:C:T	rs16954816	C	T	C	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr15	29039232	29039233	chr15:29039233:G:T	rs78378366	G	T	G	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr15	29039246	29039247	chr15:29039247:A:G	rs58812162	A	G	A	Hoxd9.mouse_homeodomain_1	4	1	-	8.027213970992095	5.372167326129518	CACATAAAA
chr15	29039266	29039267	chr15:29039267:G:A	rs67406205	G	A	G	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr15	29045568	29045569	chr15:29045569:G:A	rs140937184	G	A	G	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr15	29067538	29067539	chr15:29067539:G:A	rs28604599	G	A	G	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr15	29090865	29090866	chr15:29090866:A:C	rs11070500	A	C	A	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr15	29131287	29131288	chr15:29131288:A:G	rs61553924	A	G	A	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr15	29131471	29131472	chr15:29131472:A:G	rs34864455	A	G	G	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr15	29429612	29429613	chr15:29429613:A:G	rs4780212	A	G	G	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr15	29429626	29429627	chr15:29429627:T:C	rs72719529	T	C	T	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr15	29453829	29453830	chr15:29453830:G:C	rs659546	G	C	G	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr15	29852399	29852400	chr15:29852400:A:G	rs74475435	A	G	A	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr15	29913846	29913847	chr15:29913847:G:C	rs4779673	G	C	G	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr15	29925786	29925787	chr15:29925787:C:T	rs1718987	C	T	T	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr15	29946791	29946792	chr15:29946792:A:G	rs4779462	A	G	G	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr15	30443401	30443402	chr15:30443402:G:T	rs62016556	G	T	.	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr15	30718598	30718599	chr15:30718599:T:C	rs4779766	T	C	T	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr15	30831031	30831032	chr15:30831032:G:A	rs798081	G	A	G	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr15	30941860	30941861	chr15:30941861:C:T	rs6493352	C	T	C	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr15	31025148	31025149	chr15:31025149:G:A	rs7182143	G	A	A	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr15	31079787	31079788	chr15:31079788:T:G	chr15:31079788:T:G	T	G	T	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr15	31213058	31213059	chr15:31213059:G:A	rs75371291	G	A	G	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr15	31326386	31326387	chr15:31326387:G:A	rs80177425	G	A	G	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr15	31451857	31451858	chr15:31451858:C:A	rs4779878	C	A	A	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr15	31459738	31459739	chr15:31459739:T:C	rs12595455	T	C	T	Hoxd9.mouse_homeodomain_1	5	1	-	7.241935125048919	0.867745406802363	CCCATACAA
chr15	31462228	31462229	chr15:31462229:T:G	rs75885475	T	G	T	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr15	31527491	31527492	chr15:31527492:C:G	rs16956838	C	G	G	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr15	31635937	31635938	chr15:31635938:C:T	rs12900803	C	T	C	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr15	31804318	31804319	chr15:31804319:G:A	rs905436	G	A	G	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr15	32109406	32109407	chr15:32109407:T:C	rs10438341	T	C	C	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr15	32240134	32240135	chr15:32240135:C:T	rs1896925	C	T	t	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr15	32614799	32614800	chr15:32614800:T:A	rs4522386	T	A	.	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr15	32649833	32649834	chr15:32649834:G:A	rs58728457	G	A	G	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr15	32720300	32720301	chr15:32720301:A:G	rs73376930	A	G	A	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr15	32731483	32731484	chr15:32731484:A:C	rs17816260	A	C	A	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr15	32766321	32766322	chr15:32766322:C:T	rs12148620	C	T	T	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr15	32787286	32787287	chr15:32787287:G:A	rs12911544	G	A	G	Hoxd9.mouse_homeodomain_1	0	1	+	7.1462160923678635	6.357331058510722	GCCATAAAC
chr15	32819446	32819447	chr15:32819447:T:G	rs985200460	T	G	T	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr15	32864184	32864185	chr15:32864185:G:A	rs17816465	G	A	G	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr15	32982114	32982115	chr15:32982115:T:C	rs8027627	T	C	T	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr15	33031536	33031537	chr15:33031537:T:C	rs345874	T	C	T	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr15	33115341	33115342	chr15:33115342:G:A	rs345759	G	A	G	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr15	33126684	33126685	chr15:33126685:G:A	rs894227343	G	A	G	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr15	33145518	33145519	chr15:33145519:A:G	rs2061077	A	G	G	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr15	33323918	33323919	chr15:33323919:A:G	rs16969320	A	G	A	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr15	33463751	33463752	chr15:33463752:C:T	rs2572190	C	T	A	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr15	33629129	33629130	chr15:33629130:T:A	rs8024924	T	A	T	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr15	33721973	33721974	chr15:33721974:A:G	rs11632931	A	G	G	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr15	33722008	33722009	chr15:33722009:G:C	rs11637423	G	C	C	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr15	33742743	33742744	chr15:33742744:C:T	rs56193977	C	T	c	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr15	33742772	33742773	chr15:33742773:G:T	rs56089586	G	T	T	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr15	33883038	33883039	chr15:33883039:A:C	rs7172206	A	C	C	Hoxd9.mouse_homeodomain_1	5	1	+	7.889898683853121	5.992591131293127	ACCATAAAA
chr15	33911061	33911062	chr15:33911062:T:C	rs111636959	T	C	T	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr15	34132688	34132689	chr15:34132689:G:T	rs191685090	G	T	G	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr15	34224817	34224818	chr15:34224818:A:T	rs1426223934	A	T	A	Hoxd9.mouse_homeodomain_1	3	1	+	7.522691831404475	5.51921069459583	CCCATAAAG
chr15	34341818	34341819	chr15:34341819:C:T	rs7173	C	T	C	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr15	34467029	34467030	chr15:34467030:T:C	rs6495672	T	C	.	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr15	34588733	34588734	chr15:34588734:G:A	rs12441187	G	A	a	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr15	34754614	34754615	chr15:34754615:T:A	rs2277558	T	A	A	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr15	34798936	34798937	chr15:34798937:G:C	rs475786	G	C	G	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr15	35095096	35095097	chr15:35095097:G:A	rs58889411	G	A	G	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr15	35246902	35246903	chr15:35246903:T:C	rs318342	T	C	T	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr15	35411067	35411068	chr15:35411068:G:C	rs16960864	G	C	G	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr15	35541379	35541380	chr15:35541380:G:A	rs11631727	G	A	G	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr15	35618976	35618977	chr15:35618977:G:A	rs1383194355	G	A	G	Hoxd9.mouse_homeodomain_1	0	1	-	8.027213970992095	6.132666665683155	CACATAAAA
chr15	35697689	35697690	chr15:35697690:C:T	rs4304979	C	T	C	Hoxd9.mouse_homeodomain_1	1	1	+	7.091711387329735	5.776909472996728	CCCATCAAA
chr15	35811341	35811342	chr15:35811342:G:A	rs4924022	G	A	G	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr15	35957218	35957219	chr15:35957219:G:A	rs12101679	G	A	A	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr15	36110635	36110636	chr15:36110636:C:T	rs74565048	C	T	C	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr15	36279399	36279400	chr15:36279400:T:A	rs72719223	T	A	T	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr15	36528128	36528129	chr15:36528129:G:A	rs12899475	G	A	g	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr15	36778356	36778357	chr15:36778357:A:C	rs16964032	A	C	A	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr15	36925419	36925420	chr15:36925420:C:A	rs8026749	C	A	C	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr15	36958882	36958883	chr15:36958883:G:A	rs1562805	G	A	G	Hoxd9.mouse_homeodomain_1	2	1	-	8.98901893988973	2.5015784822660927	CCCATAAAA
chr15	37550354	37550355	chr15:37550355:T:C	rs10852004	T	C	T	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr15	37829289	37829290	chr15:37829290:G:A	rs4924193	G	A	A	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr15	38069807	38069808	chr15:38069808:C:T	rs145947431	C	T	C	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr15	38069817	38069818	chr15:38069818:C:T	rs34633205	C	T	C	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr15	38072571	38072572	chr15:38072572:T:C	rs143082602	T	C	T	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr15	38170119	38170120	chr15:38170120:A:G	rs9783709	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.099252595576761	6.765173995714267	GCCATTAAA
chr15	38187233	38187234	chr15:38187234:T:C	rs55810958	T	C	T	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr15	38205885	38205886	chr15:38205886:G:A	rs72709647	G	A	G	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr15	38260121	38260122	chr15:38260122:A:T	rs8036491	A	T	A	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr15	38453035	38453036	chr15:38453036:A:T	rs12905334	A	T	A	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr15	38530703	38530704	chr15:38530704:T:C	rs7403531	T	C	C	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr15	38670651	38670652	chr15:38670652:C:T	rs28671139	C	T	C	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr15	38683277	38683278	chr15:38683278:C:T	rs7183545	C	T	C	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr15	38696966	38696967	chr15:38696967:T:C	rs35755738	T	C	c	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr15	38707932	38707933	chr15:38707933:T:C	rs1438589160	T	C	T	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr15	38733419	38733420	chr15:38733420:A:G	rs11857887	A	G	A	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr15	39092317	39092318	chr15:39092318:G:A	rs35130744	G	A	G	Hoxd9.mouse_homeodomain_1	0	1	-	7.654940340027237	5.7603930347182954	CCCGTAAAA
chr15	39184935	39184936	chr15:39184936:A:G	rs78740587	A	G	A	Hoxd9.mouse_homeodomain_1	7	1	+	7.9772278588234515	1.2734019122317202	GCAATAAAA
chr15	39202774	39202775	chr15:39202775:A:C	rs10520123	A	C	A	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr15	39202781	39202782	chr15:39202782:C:T	rs79994695	C	T	C	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr15	39263071	39263072	chr15:39263072:A:G	rs144399931	A	G	A	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr15	39301790	39301791	chr15:39301791:A:G	rs779348684	A	G	A	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr15	39364020	39364021	chr15:39364021:A:C	rs11638467	A	C	A	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr15	39365444	39365445	chr15:39365445:G:A	rs1470148	G	A	G	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr15	39397465	39397466	chr15:39397466:C:T	rs11636438	C	T	T	Hoxd9.mouse_homeodomain_1	0	1	+	7.45645131454733	5.561904009238388	CCCATAAAC
chr15	39499842	39499843	chr15:39499843:C:T	rs116952056	C	T	C	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr15	39623206	39623207	chr15:39623207:G:A	rs16969410	G	A	G	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr15	39642256	39642257	chr15:39642257:T:C	rs16969484	T	C	T	Hoxd9.mouse_homeodomain_1	6	1	-	8.409487817756228	1.7056618711644962	CCCATTAAA
chr15	39651820	39651821	chr15:39651821:T:G	rs12911549	T	G	G	Hoxd9.mouse_homeodomain_1	4	1	+	8.98901893988973	2.147200492559124	CCCATAAAA
chr15	39691662	39691663	chr15:39691663:C:T	rs2129458	C	T	T	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr15	39720766	39720767	chr15:39720767:C:T	rs13380080	C	T	C	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr15	39721041	39721042	chr15:39721042:G:A	chr15:39721042:G:A	G	A	G	Hoxd9.mouse_homeodomain_1	0	1	+	7.212456609225008	6.423571575367866	GCCATAAAG
chr15	39970073	39970074	chr15:39970074:G:C	rs8029465	G	C	C	Hoxd9.mouse_homeodomain_1	0	1	+	7.212456609225008	7.522691831404475	GCCATAAAG
chr15	40068164	40068165	chr15:40068165:G:T	rs28826672	G	T	G	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr15	40142019	40142020	chr15:40142020:C:T	rs12913620	C	T	c	Hoxd9.mouse_homeodomain_1	6	1	+	7.241935125048919	6.099603169859144	CCCATACAA
chr15	40290297	40290298	chr15:40290298:G:T	rs936211	G	T	G	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr15	40321998	40321999	chr15:40321999:A:G	rs2118961	A	G	A	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr15	40395626	40395627	chr15:40395627:G:A	rs11636361	G	A	A	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr15	40764677	40764678	chr15:40764678:A:G	rs75340307	A	G	A	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr15	40764678	40764679	chr15:40764679:C:T	rs1371944124	C	T	C	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr15	41341724	41341725	chr15:41341725:A:T	rs34134904	A	T	A	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr15	41695849	41695850	chr15:41695850:C:T	rs16971974	C	T	C	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr15	41774228	41774229	chr15:41774229:T:C	rs766028475	T	C	T	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr15	41831135	41831136	chr15:41831136:C:T	rs529434156	C	T	C	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr15	41958316	41958317	chr15:41958317:T:C	rs59114612	T	C	T	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr15	42010321	42010322	chr15:42010322:C:T	rs9919954	C	T	C	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr15	42066690	42066691	chr15:42066691:C:T	rs151154138	C	T	C	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr15	42089041	42089042	chr15:42089042:C:T	rs639560	C	T	C	Hoxd9.mouse_homeodomain_1	2	1	+	6.943160709270972	0.4557202516473358	CCCATTAAG
chr15	42344824	42344825	chr15:42344825:T:C	rs16973132	T	C	T	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr15	42389410	42389411	chr15:42389411:G:A	rs16973226	G	A	G	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr15	42490831	42490832	chr15:42490832:G:A	rs867348456	G	A	G	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr15	42826425	42826426	chr15:42826426:C:T	rs74536015	C	T	C	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr15	43092863	43092864	chr15:43092864:G:A	rs114600943	G	A	A	Hoxd9.mouse_homeodomain_1	2	1	-	8.98901893988973	2.5015784822660927	CCCATAAAA
chr15	43105566	43105567	chr15:43105567:A:G	rs553389161	A	G	A	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr15	44148693	44148694	chr15:44148694:T:G	rs76351064	T	G	T	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr15	44775506	44775507	chr15:44775507:A:G	rs76159792	A	G	N	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr15	45201818	45201819	chr15:45201819:T:C	rs1648301	T	C	T	Hoxd9.mouse_homeodomain_1	5	1	-	8.027213970992095	1.6530242527455408	CACATAAAA
chr15	45387468	45387469	chr15:45387469:C:G	rs1145081	C	G	G	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr15	45658236	45658237	chr15:45658237:G:A	rs664824	G	A	A	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr15	45705748	45705749	chr15:45705749:C:G	rs573293775	C	G	C	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr15	45705771	45705772	chr15:45705772:T:C	rs28657633	T	C	t	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr15	46607080	46607081	chr15:46607081:A:G	rs8041331	A	G	G	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr15	46627624	46627625	chr15:46627625:G:C	rs55942341	G	C	G	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr15	46652455	46652456	chr15:46652456:C:T	rs7183405	C	T	C	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr15	46879126	46879127	chr15:46879127:C:T	rs9920831	C	T	C	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr15	47048772	47048773	chr15:47048773:G:A	rs1850003	G	A	G	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr15	47288741	47288742	chr15:47288742:T:C	rs766132	T	C	T	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr15	47392734	47392735	chr15:47392735:A:C	rs1025142	A	C	A	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr15	47392738	47392739	chr15:47392739:T:C	rs34488670	T	C	T	Hoxd9.mouse_homeodomain_1	7	1	-	8.678783717710262	1.9749577711185315	GCCATAAAA
chr15	47450553	47450554	chr15:47450554:G:T	rs149078171	G	T	G	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr15	47547587	47547588	chr15:47547588:G:T	rs8027136	G	T	G	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr15	47602338	47602339	chr15:47602339:G:A	rs72735813	G	A	G	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr15	47602354	47602355	chr15:47602355:A:G	rs1435755	A	G	A	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr15	47780002	47780003	chr15:47780003:T:A	rs4774505	T	A	T	Hoxd9.mouse_homeodomain_1	7	1	-	8.099252595576761	6.3521687807359495	GCCATTAAA
chr15	48404187	48404188	chr15:48404188:C:T	rs12592059	C	T	T	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr15	48542962	48542963	chr15:48542963:G:C	rs74011855	G	C	G	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr15	48805818	48805819	chr15:48805819:C:A	rs1426200	C	A	A	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr15	48852309	48852310	chr15:48852310:T:C	rs73400401	T	C	T	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr15	49302330	49302331	chr15:49302331:C:G	rs3907313	C	G	C	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr15	49361606	49361607	chr15:49361607:C:T	rs8024184	C	T	T	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr15	49456415	49456416	chr15:49456416:G:A	rs17479289	G	A	A	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr15	49501822	49501823	chr15:49501823:T:C	rs7169799	T	C	T	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr15	49569028	49569029	chr15:49569029:G:A	rs12594670	G	A	G	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr15	49699897	49699898	chr15:49699898:G:A	rs28766285	G	A	G	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr15	49858202	49858203	chr15:49858203:A:G	rs4275793	A	G	A	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr15	50058486	50058487	chr15:50058487:C:T	rs11070743	C	T	C	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr15	50058488	50058489	chr15:50058489:T:A	rs10162988	T	A	A	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr15	50118332	50118333	chr15:50118333:A:G	rs2414020	A	G	G	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr15	50258885	50258886	chr15:50258886:T:C	rs854153	T	C	C	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr15	50380222	50380223	chr15:50380223:C:T	rs4775878	C	T	A	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr15	50458972	50458973	chr15:50458973:A:G	rs113853662	A	G	A	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr15	50524227	50524228	chr15:50524228:T:C	rs76077201	T	C	T	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr15	50668940	50668941	chr15:50668941:G:A	rs8029941	G	A	G	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr15	51144199	51144200	chr15:51144200:T:C	rs11070836	T	C	T	Hoxd9.mouse_homeodomain_1	6	1	-	7.9772278588234515	1.2734019122317202	GCAATAAAA
chr15	51183454	51183455	chr15:51183455:T:G	rs62020072	T	G	T	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr15	51186904	51186905	chr15:51186905:A:C	rs7170255	A	C	A	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr15	51391170	51391171	chr15:51391171:C:T	rs56158617	C	T	T	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr15	51602072	51602073	chr15:51602073:A:T	rs11070861	A	T	T	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr15	51846462	51846463	chr15:51846463:G:C	rs187611039	G	C	G	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr15	51928064	51928065	chr15:51928065:C:T	rs2623286	C	T	T	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr15	52093629	52093630	chr15:52093630:A:G	rs55931072	A	G	A	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr15	52095483	52095484	chr15:52095484:C:T	rs41494446	C	T	c	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr15	52095522	52095523	chr15:52095523:T:C	rs28613818	T	C	T	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr15	52095765	52095766	chr15:52095766:C:G	rs28533194	C	G	C	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr15	52096024	52096025	chr15:52096025:C:T	rs7402987	C	T	T	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr15	52096081	52096082	chr15:52096082:A:G	rs11857876	A	G	A	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr15	52226713	52226714	chr15:52226714:C:T	rs28730328	C	T	C	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr15	52284270	52284271	chr15:52284271:T:C	rs186070540	T	C	T	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr15	52284277	52284278	chr15:52284278:C:T	rs59056894	C	T	C	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr15	52563723	52563724	chr15:52563724:C:G	rs57187323	C	G	C	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr15	52568168	52568169	chr15:52568169:A:T	rs77102195	A	T	A	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr15	52619137	52619138	chr15:52619138:A:G	rs12914502	A	G	A	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr15	52651579	52651580	chr15:52651580:T:C	chr15:52651580:T:C	T	C	T	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr15	52651616	52651617	chr15:52651617:C:T	rs4548810	C	T	T	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr15	52730665	52730666	chr15:52730666:A:C	rs72740247	A	C	A	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr15	52782754	52782755	chr15:52782755:G:A	rs62023488	G	A	G	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr15	53247435	53247436	chr15:53247436:A:G	rs1872699	A	G	A	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr15	53272446	53272447	chr15:53272447:C:T	rs62006008	C	T	C	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr15	53315251	53315252	chr15:53315252:T:C	rs10152269	T	C	C	Hoxd9.mouse_homeodomain_1	3	1	-	7.091711387329735	5.757632787467242	CCCATCAAA
chr15	53458376	53458377	chr15:53458377:T:C	rs7167665	T	C	A	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr15	53681049	53681050	chr15:53681050:C:A	rs74015877	C	A	-	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr15	53693252	53693253	chr15:53693253:A:C	rs8182039	A	C	A	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr15	53694949	53694950	chr15:53694950:A:G	rs10083695	A	G	A	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr15	53885352	53885353	chr15:53885353:C:T	rs28768471	C	T	C	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr15	53918531	53918532	chr15:53918532:T:A	rs1214459377	T	A	T	Hoxd9.mouse_homeodomain_1	1	1	-	7.716978748812629	7.363981803377255	GACATAAAA
chr15	54364751	54364752	chr15:54364752:C:A	rs7162826	C	A	C	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr15	55019364	55019365	chr15:55019365:G:T	rs1690366	G	T	G	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr15	55057876	55057877	chr15:55057877:G:A	rs61673643	G	A	G	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr15	55549589	55549590	chr15:55549590:C:T	rs7164878	C	T	C	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr15	55601046	55601047	chr15:55601047:A:G	rs62017961	A	G	A	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr15	55762730	55762731	chr15:55762731:C:A	rs7165205	C	A	C	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr15	55762745	55762746	chr15:55762746:C:A	rs7165214	C	A	C	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr15	55950987	55950988	chr15:55950988:G:A	rs78248035	G	A	G	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr15	56024849	56024850	chr15:56024850:A:G	rs1848609	A	G	G	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr15	56050237	56050238	chr15:56050238:C:T	rs12913391	C	T	C	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr15	56181122	56181123	chr15:56181123:A:G	rs72738636	A	G	A	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr15	56232069	56232070	chr15:56232070:G:A	rs11632081	G	A	G	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr15	56246150	56246151	chr15:56246151:A:T	rs558557389	A	T	a	Hoxd9.mouse_homeodomain_1	4	1	-	8.409487817756228	1.5676693704256222	CCCATTAAA
chr15	56320091	56320092	chr15:56320092:T:A	rs2725850	T	A	A	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr15	56449979	56449980	chr15:56449980:C:A	rs35978617	C	A	C	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr15	56523641	56523642	chr15:56523642:C:T	rs10431786	C	T	C	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr15	56817995	56817996	chr15:56817996:T:A	chr15:56817996:T:A	T	A	T	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr15	56920557	56920558	chr15:56920558:A:G	rs75578967	A	G	A	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr15	57147551	57147552	chr15:57147552:T:A	rs2733334	T	A	A	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr15	57171687	57171688	chr15:57171688:C:T	rs55702628	C	T	C	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr15	57193421	57193422	chr15:57193422:G:A	rs7161965	G	A	G	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr15	57236417	57236418	chr15:57236418:T:A	rs147395283	T	A	T	Hoxd9.mouse_homeodomain_1	8	1	-	7.716978748812629	4.784465624046561	GACATAAAA
chr15	57257088	57257089	chr15:57257089:C:T	rs139414363	C	T	C	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr15	57259590	57259591	chr15:57259591:A:G	rs2733330	A	G	A	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr15	57307508	57307509	chr15:57307509:C:A	rs72736018	C	A	C	Hoxd9.mouse_homeodomain_1	2	1	+	8.678783717710262	7.9772278588234515	GCCATAAAA
chr15	57567076	57567077	chr15:57567077:T:A	rs11638057	T	A	T	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr15	57610283	57610284	chr15:57610284:G:C	rs724785	G	C	G	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr15	57738943	57738944	chr15:57738944:T:C	rs510331	T	C	C	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr15	57914521	57914522	chr15:57914522:A:C	rs62003162	A	C	A	Hoxd9.mouse_homeodomain_1	6	1	+	7.34470511784777	5.597621303006958	GCCGTAAAA
chr15	57967740	57967741	chr15:57967741:G:T	rs8031133	G	T	G	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr15	57994995	57994996	chr15:57994996:T:C	rs74017097	T	C	T	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr15	58114872	58114873	chr15:58114873:T:A	rs2704211	T	A	T	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr15	58172379	58172380	chr15:58172380:A:C	rs2414546	A	C	A	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr15	58203565	58203566	chr15:58203566:T:A	rs117369182	T	A	T	Hoxd9.mouse_homeodomain_1	7	1	-	7.889898683853121	6.1428148690123106	ACCATAAAA
chr15	58269698	58269699	chr15:58269699:T:C	rs192259583	T	C	T	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr15	58270181	58270182	chr15:58270182:C:T	rs139582468	C	T	C	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr15	58270182	58270183	chr15:58270183:T:C	rs115185040	T	C	T	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr15	58270213	58270214	chr15:58270214:G:A	rs149709384	G	A	G	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr15	58310507	58310508	chr15:58310508:C:G	rs751779770	C	G	C	Hoxd9.mouse_homeodomain_1	8	1	-	7.212456609225008	7.1462160923678635	GCCATAAAG
chr15	58356218	58356219	chr15:58356219:C:T	rs1864482	C	T	C	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr15	58401461	58401462	chr15:58401462:G:A	rs28461450	G	A	G	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr15	58473197	58473198	chr15:58473198:T:C	rs117151690	T	C	T	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr15	58490942	58490943	chr15:58490943:C:T	rs144839844	C	T	C	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr15	58502017	58502018	chr15:58502018:C:T	rs1276782378	C	T	C	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr15	58509885	58509886	chr15:58509886:G:C	rs2899631	G	C	C	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr15	58563012	58563013	chr15:58563013:C:T	rs17301864	C	T	C	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr15	58631590	58631591	chr15:58631591:G:C	rs71478680	G	C	G	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr15	58644574	58644575	chr15:58644575:A:T	rs73426520	A	T	A	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr15	58689915	58689916	chr15:58689916:C:T	rs146442492	C	T	C	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr15	58930500	58930501	chr15:58930501:T:A	rs11853076	T	A	T	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr15	58948601	58948602	chr15:58948602:T:G	rs7167050	T	G	G	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr15	59166012	59166013	chr15:59166013:G:T	rs10519001	G	T	T	Hoxd9.mouse_homeodomain_1	1	1	-	8.409487817756228	7.447682848858594	CCCATTAAA
chr15	59167122	59167123	chr15:59167123:C:T	rs8036093	C	T	T	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr15	59223721	59223722	chr15:59223722:G:A	rs34571374	G	A	G	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr15	59249568	59249569	chr15:59249569:A:T	rs4238335	A	T	A	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr15	59300670	59300671	chr15:59300671:C:T	rs148052770	C	T	C	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr15	59300673	59300674	chr15:59300674:G:C	rs567939673	G	C	G	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr15	59316226	59316227	chr15:59316227:G:A	rs60495518	G	A	G	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr15	59364600	59364601	chr15:59364601:C:T	rs11639217	C	T	C	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr15	59492526	59492527	chr15:59492527:T:C	rs16941446	T	C	T	Hoxd9.mouse_homeodomain_1	4	1	+	8.678783717710262	6.023737072847684	GCCATAAAA
chr15	59674353	59674354	chr15:59674354:G:A	rs12593480	G	A	A	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr15	59674847	59674848	chr15:59674848:C:T	rs11071469	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	-	8.678783717710262	7.889898683853121	GCCATAAAA
chr15	59711877	59711878	chr15:59711878:C:G	rs17236867	C	G	C	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr15	59821609	59821610	chr15:59821610:A:T	rs2965332	A	T	T	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr15	60318695	60318696	chr15:60318696:T:C	rs11071516	T	C	T	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr15	60397378	60397379	chr15:60397379:T:C	rs766633619	T	C	T	Hoxd9.mouse_homeodomain_1	5	1	-	8.98901893988973	2.6148292216431743	CCCATAAAA
chr15	60397389	60397390	chr15:60397390:G:A	rs72746635	G	A	G	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr15	60507945	60507946	chr15:60507946:A:G	rs17191442	A	G	A	Hoxd9.mouse_homeodomain_1	8	1	+	8.287463081002919	6.821135972517665	CCAATAAAA
chr15	60511962	60511963	chr15:60511963:C:T	rs115736015	C	T	C	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr15	60764864	60764865	chr15:60764865:A:G	rs2279296	A	G	A	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr15	60961539	60961540	chr15:60961540:T:C	rs7172084	T	C	T	Hoxd9.mouse_homeodomain_1	4	1	+	7.212456609225008	4.557409964362429	GCCATAAAG
chr15	60961541	60961542	chr15:60961542:A:G	rs10438288	A	G	A	Hoxd9.mouse_homeodomain_1	6	1	+	7.212456609225008	0.5086306626332764	GCCATAAAG
chr15	61480595	61480596	chr15:61480596:C:T	rs8030126	C	T	C	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr15	61647720	61647721	chr15:61647721:T:C	rs139232701	T	C	T	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr15	61701103	61701104	chr15:61701104:G:T	rs13380413	G	T	G	Hoxd9.mouse_homeodomain_1	0	1	-	8.409487817756228	7.3103675617196195	CCCATTAAA
chr15	61755989	61755990	chr15:61755990:G:A	rs12910688	G	A	G	Hoxd9.mouse_homeodomain_1	2	1	-	7.716978748812629	1.2295382911889927	GACATAAAA
chr15	61816033	61816034	chr15:61816034:G:C	rs880151	G	C	G	Hoxd9.mouse_homeodomain_1	8	1	+	6.943160709270972	6.876920192413827	CCCATTAAG
chr15	61840321	61840322	chr15:61840322:C:G	rs748667	C	G	C	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr15	62113350	62113351	chr15:62113351:G:A	rs76529333	G	A	G	Hoxd9.mouse_homeodomain_1	8	1	+	7.522691831404475	8.98901893988973	CCCATAAAG
chr15	62113370	62113371	chr15:62113371:T:C	rs12912130	T	C	T	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr15	62413425	62413426	chr15:62413426:A:G	rs76657506	A	G	A	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr15	62453890	62453891	chr15:62453891:G:A	rs16945077	G	A	G	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr15	62621931	62621932	chr15:62621932:G:A	rs4774443	G	A	G	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr15	62665913	62665914	chr15:62665914:C:T	rs6494343	C	T	C	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr15	62701037	62701038	chr15:62701038:C:T	rs77026267	C	T	c	Hoxd9.mouse_homeodomain_1	0	1	-	8.678783717710262	7.889898683853121	GCCATAAAA
chr15	62835024	62835025	chr15:62835025:G:A	rs8033703	G	A	A	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr15	62948568	62948569	chr15:62948569:A:G	rs12594368	A	G	G	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr15	63050350	63050351	chr15:63050351:T:G	rs76113767	T	G	T	Hoxd9.mouse_homeodomain_1	6	1	-	7.091711387329735	5.344627572488923	CCCATCAAA
chr15	63226888	63226889	chr15:63226889:T:A	rs2899691	T	A	-	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr15	63236056	63236057	chr15:63236057:C:A	rs11853804	C	A	A	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr15	63250609	63250610	chr15:63250610:A:C	rs112861248	A	C	A	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr15	63503081	63503082	chr15:63503082:G:A	chr15:63503082:G:A	G	A	G	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr15	63701595	63701596	chr15:63701596:T:C	rs552747825	T	C	T	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr15	63708175	63708176	chr15:63708176:C:A	rs145211343	C	A	C	Hoxd9.mouse_homeodomain_1	1	1	+	7.9772278588234515	7.0154228899258175	GCAATAAAA
chr15	63907008	63907009	chr15:63907009:G:A	rs6494452	G	A	G	Hoxd9.mouse_homeodomain_1	0	1	+	8.678783717710262	7.889898683853121	GCCATAAAA
chr15	64004231	64004232	chr15:64004232:G:A	rs112791424	G	A	G	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr15	64344891	64344892	chr15:64344892:C:T	rs3843699	C	T	C	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr15	64968020	64968021	chr15:64968021:C:A	rs28820966	C	A	C	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr15	65234007	65234008	chr15:65234008:G:A	rs755117	G	A	G	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr15	65845930	65845931	chr15:65845931:A:C	rs7166166	A	C	C	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr15	65870221	65870222	chr15:65870222:C:T	rs117220954	C	T	C	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr15	66047621	66047622	chr15:66047622:T:C	rs28524799	T	C	C	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr15	66203292	66203293	chr15:66203293:T:A	rs12148583	T	A	A	Hoxd9.mouse_homeodomain_1	8	1	-	7.654940340027237	4.7224272152611695	CCCGTAAAA
chr15	66429192	66429193	chr15:66429193:G:A	rs12906411	G	A	A	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr15	66498483	66498484	chr15:66498484:C:T	rs12911117	C	T	C	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr15	66498517	66498518	chr15:66498518:A:G	rs12910977	A	G	A	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr15	66502013	66502014	chr15:66502014:G:A	rs74956204	G	A	G	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr15	66572134	66572135	chr15:66572135:C:T	rs8030978	C	T	C	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr15	66752019	66752020	chr15:66752020:C:A	rs12439327	C	A	A	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr15	66766920	66766921	chr15:66766921:A:G	rs4390543	A	G	G	Hoxd9.mouse_homeodomain_1	6	1	+	7.9772278588234515	1.2734019122317202	GCAATAAAA
chr15	66784608	66784609	chr15:66784609:A:G	rs4147407	A	G	A	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr15	66784621	66784622	chr15:66784622:G:C	rs117287881	G	C	G	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr15	66804319	66804320	chr15:66804320:A:G	rs7183242	A	G	G	Hoxd9.mouse_homeodomain_1	6	1	+	7.522691831404475	0.8188658848127437	CCCATAAAG
chr15	66858858	66858859	chr15:66858859:C:T	rs77248314	C	T	C	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr15	66867331	66867332	chr15:66867332:C:G	rs11856656	C	G	G	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr15	66867373	66867374	chr15:66867374:A:G	rs75589635	A	G	A	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr15	66933646	66933647	chr15:66933647:C:A	rs266371	C	A	C	Hoxd9.mouse_homeodomain_1	0	1	+	7.091711387329735	5.992591131293127	CCCATCAAA
chr15	66937858	66937859	chr15:66937859:T:G	rs74019841	T	G	T	Hoxd9.mouse_homeodomain_1	5	1	-	7.1462160923678635	5.248908539807868	GCCATAAAC
chr15	67000501	67000502	chr15:67000502:G:A	rs2927179	G	A	A	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr15	67130052	67130053	chr15:67130053:A:G	rs990986	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	6.943160709270972	5.60908210940848	CCCATTAAG
chr15	67402866	67402867	chr15:67402867:C:T	rs148320224	C	T	T	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr15	67545069	67545070	chr15:67545070:C:T	rs2583587	C	T	T	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr15	67551494	67551495	chr15:67551495:G:T	rs57683950	G	T	g	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr15	67565203	67565204	chr15:67565204:A:G	rs7182417	A	G	G	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr15	67571524	67571525	chr15:67571525:A:G	rs16951010	A	G	A	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr15	67581706	67581707	chr15:67581707:C:T	rs11638507	C	T	C	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr15	67603232	67603233	chr15:67603233:C:T	rs1996482	C	T	C	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr15	67696336	67696337	chr15:67696337:T:C	rs4506840	T	C	T	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr15	67720740	67720741	chr15:67720741:A:G	rs17243334	A	G	A	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr15	67779736	67779737	chr15:67779737:T:G	rs4489954	T	G	T	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr15	67918907	67918908	chr15:67918908:T:C	rs452164	T	C	T	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr15	68403939	68403940	chr15:68403940:G:C	rs73433955	G	C	G	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr15	68439745	68439746	chr15:68439746:G:A	rs12593634	G	A	G	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr15	68471518	68471519	chr15:68471519:G:A	rs8033267	G	A	G	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr15	68471541	68471542	chr15:68471542:A:G	rs7172197	A	G	A	Hoxd9.mouse_homeodomain_1	8	1	+	7.707931958869418	6.241604850384163	CCAATTAAA
chr15	68506468	68506469	chr15:68506469:T:C	rs58714802	T	C	C	Hoxd9.mouse_homeodomain_1	3	1	-	8.027213970992095	6.693135371129603	CACATAAAA
chr15	68506469	68506470	chr15:68506470:G:A	rs55910357	G	A	G	Hoxd9.mouse_homeodomain_1	2	1	-	8.027213970992095	1.5397735133684596	CACATAAAA
chr15	68549449	68549450	chr15:68549450:T:C	rs895138	T	C	C	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr15	68829383	68829384	chr15:68829384:A:G	rs1869476	A	G	A	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr15	69225962	69225963	chr15:69225963:C:T	rs533923825	C	T	C	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr15	69455995	69455996	chr15:69455996:G:A	rs1463912	G	A	G	Hoxd9.mouse_homeodomain_1	1	1	-	7.889898683853121	6.575096769520114	ACCATAAAA
chr15	69479281	69479282	chr15:69479282:T:C	rs16953384	T	C	T	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr15	69723963	69723964	chr15:69723964:T:A	rs143654202	T	A	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.212456609225008	5.2089754724163635	GCCATAAAG
chr15	69734957	69734958	chr15:69734958:C:G	chr15:69734958:C:G	C	G	C	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr15	69748650	69748651	chr15:69748651:G:A	rs71393470	G	A	G	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr15	69763560	69763561	chr15:69763561:T:C	rs2899755	T	C	C	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr15	69779438	69779439	chr15:69779439:G:A	rs10518837	G	A	G	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr15	69790056	69790057	chr15:69790057:C:T	rs190492508	C	T	C	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr15	69803415	69803416	chr15:69803416:C:T	rs12439031	C	T	c	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr15	69807849	69807850	chr15:69807850:T:G	rs17323663	T	G	T	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr15	69916142	69916143	chr15:69916143:C:T	rs2601896	C	T	C	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr15	69916222	69916223	chr15:69916223:T:C	rs939044	T	C	T	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr15	69916242	69916243	chr15:69916243:A:G	rs1078528	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	7.45645131454733	6.122372714684838	CCCATAAAC
chr15	70062593	70062594	chr15:70062594:G:A	rs34573732	G	A	G	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr15	70195135	70195136	chr15:70195136:C:T	rs72751530	C	T	C	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr15	70226906	70226907	chr15:70226907:T:A	rs28375532	T	A	T	Hoxd9.mouse_homeodomain_1	8	1	-	7.9772278588234515	5.044714734057384	GCAATAAAA
chr15	70319290	70319291	chr15:70319291:C:T	rs74021724	C	T	C	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr15	70335179	70335180	chr15:70335180:T:C	rs8024707	T	C	C	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr15	70377093	70377094	chr15:70377094:C:G	rs118099298	C	G	C	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr15	70377094	70377095	chr15:70377095:T:G	rs116874596	T	G	T	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr15	70402115	70402116	chr15:70402116:A:T	rs767211	A	T	A	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr15	70432655	70432656	chr15:70432656:G:A	rs117979399	G	A	G	Hoxd9.mouse_homeodomain_1	0	1	-	7.241935125048919	5.347387819739977	CCCATACAA
chr15	70488197	70488198	chr15:70488198:G:A	rs546158324	G	A	G	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr15	70575945	70575946	chr15:70575946:G:A	rs1896437	G	A	A	Hoxd9.mouse_homeodomain_1	0	1	+	8.678783717710262	7.889898683853121	GCCATAAAA
chr15	70792306	70792307	chr15:70792307:C:G	rs75455152	C	G	C	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr15	70813096	70813097	chr15:70813097:G:T	rs74023637	G	T	G	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr15	70873480	70873481	chr15:70873481:T:C	rs62019072	T	C	T	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr15	71054425	71054426	chr15:71054426:T:C	rs185409891	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.98901893988973	7.654940340027237	CCCATAAAA
chr15	71117259	71117260	chr15:71117260:T:G	chr15:71117260:T:G	T	G	T	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr15	71296738	71296739	chr15:71296739:G:A	rs72759684	G	A	G	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr15	71363295	71363296	chr15:71363296:C:G	rs4776550	C	G	C	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr15	71659713	71659714	chr15:71659714:A:C	rs954458	A	C	A	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr15	71659728	71659729	chr15:71659729:G:A	rs954459	G	A	A	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr15	71692425	71692426	chr15:71692426:A:G	rs1480126414	A	G	A	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr15	71732993	71732994	chr15:71732994:A:G	rs77207317	A	G	A	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr15	71761644	71761645	chr15:71761645:C:T	rs922917	C	T	T	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr15	71973002	71973003	chr15:71973003:A:G	rs2957736	A	G	A	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr15	72207086	72207087	chr15:72207087:G:A	rs140020799	G	A	G	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr15	72227269	72227270	chr15:72227270:A:T	rs2959906	A	T	T	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr15	72227294	72227295	chr15:72227295:T:G	rs8192367	T	G	G	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr15	72474116	72474117	chr15:72474117:T:C	rs115603782	T	C	T	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr15	72734108	72734109	chr15:72734109:T:C	rs62017593	T	C	T	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr15	72870574	72870575	chr15:72870575:G:A	rs6495026	G	A	g	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr15	72979622	72979623	chr15:72979623:T:A	rs7166470	T	A	T	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr15	73082832	73082833	chr15:73082833:A:C	rs75161420	A	C	a	Hoxd9.mouse_homeodomain_1	6	1	+	7.212456609225008	5.465372794384197	GCCATAAAG
chr15	73298881	73298882	chr15:73298882:G:T	rs12442755	G	T	G	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr15	73358860	73358861	chr15:73358861:T:C	rs11636411	T	C	T	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr15	73700464	73700465	chr15:73700465:T:C	rs1030107943	T	C	T	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr15	73766444	73766445	chr15:73766445:C:T	rs4243087	C	T	C	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr15	73837443	73837444	chr15:73837444:G:A	rs16958372	G	A	A	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr15	73871306	73871307	chr15:73871307:A:G	rs147376835	A	G	A	Hoxd9.mouse_homeodomain_1	4	1	-	7.241935125048919	4.5868884801863405	CCCATACAA
chr15	73892103	73892104	chr15:73892104:T:A	rs113195336	T	A	T	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr15	74222964	74222965	chr15:74222965:G:T	rs16966903	G	T	G	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr15	74315025	74315026	chr15:74315026:G:T	rs74692356	G	T	G	Hoxd9.mouse_homeodomain_1	1	1	-	7.9772278588234515	7.0154228899258175	GCAATAAAA
chr15	74426357	74426358	chr15:74426358:A:G	rs11852760	A	G	G	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr15	74642433	74642434	chr15:74642434:A:C	rs1172702142	A	C	A	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr15	74642434	74642435	chr15:74642435:C:T	rs74025819	C	T	C	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr15	74978887	74978888	chr15:74978888:C:T	rs1867153	C	T	C	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr15	75059288	75059289	chr15:75059289:T:C	rs72730583	T	C	T	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr15	75493990	75493991	chr15:75493991:A:G	rs571915492	A	G	A	Hoxd9.mouse_homeodomain_1	4	1	-	8.287463081002919	5.632416436140341	CCAATAAAA
chr15	76198454	76198455	chr15:76198455:C:T	rs759866559	C	T	C	Hoxd9.mouse_homeodomain_1	2	1	+	7.1462160923678635	0.6587756347442264	GCCATAAAC
chr15	76335505	76335506	chr15:76335506:G:A	rs116707106	G	A	G	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr15	76967258	76967259	chr15:76967259:C:T	rs117316879	C	T	C	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr15	77076369	77076370	chr15:77076370:T:A	rs938501	T	A	A	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr15	77420616	77420617	chr15:77420617:T:C	rs1377416999	T	C	T	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr15	77506306	77506307	chr15:77506307:G:A	rs150757805	G	A	G	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr15	77506307	77506308	chr15:77506308:C:A	rs78248964	C	A	C	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr15	77604904	77604905	chr15:77604905:G:A	rs28477219	G	A	A	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr15	77907099	77907100	chr15:77907100:C:T	rs4513058	C	T	C	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr15	77932500	77932501	chr15:77932501:T:C	rs28705941	T	C	t	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr15	78000595	78000596	chr15:78000596:C:A	rs114029655	C	A	C	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr15	78077953	78077954	chr15:78077954:T:C	rs148924439	T	C	T	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr15	78111972	78111973	chr15:78111973:A:C	rs11856417	A	C	C	Hoxd9.mouse_homeodomain_1	7	1	+	7.45645131454733	4.567035544516743	CCCATAAAC
chr15	78137819	78137820	chr15:78137820:C:T	rs1079396	C	T	C	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr15	78206604	78206605	chr15:78206605:G:A	rs1011173	G	A	G	Hoxd9.mouse_homeodomain_1	0	1	+	8.099252595576761	7.3103675617196195	GCCATTAAA
chr15	78374680	78374681	chr15:78374681:G:C	rs7173888	G	C	C	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr15	78425562	78425563	chr15:78425563:T:C	rs4390557	T	C	T	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr15	78482333	78482334	chr15:78482334:A:G	rs10851906	A	G	A	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr15	78602416	78602417	chr15:78602417:C:G	rs3743078	C	G	C	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr15	78705219	78705220	chr15:78705220:A:C	rs1825089	A	C	A	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr15	78982113	78982114	chr15:78982114:C:G	rs73465317	C	G	C	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr15	79007323	79007324	chr15:79007324:G:A	rs140416106	G	A	A	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr15	79174600	79174601	chr15:79174601:T:G	rs28758416	T	G	T	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr15	79174604	79174605	chr15:79174605:T:C	rs28736807	T	C	C	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr15	79199793	79199794	chr15:79199794:T:C	rs148471805	T	C	t	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr15	79418157	79418158	chr15:79418158:C:T	rs769769	C	T	T	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr15	79650980	79650981	chr15:79650981:A:G	rs4779130	A	G	G	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr15	79881365	79881366	chr15:79881366:T:A	rs78700463	T	A	T	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr15	79924189	79924190	chr15:79924190:A:T	rs2733101	A	T	A	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr15	79924192	79924193	chr15:79924193:C:T	rs566449199	C	T	C	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr15	79942671	79942672	chr15:79942672:G:T	rs2733092	G	T	G	Hoxd9.mouse_homeodomain_1	0	1	+	7.9772278588234515	6.392915775693977	GCAATAAAA
chr15	80007597	80007598	chr15:80007598:T:G	rs190039958	T	G	T	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr15	80043984	80043985	chr15:80043985:C:T	rs549054111	C	T	C	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr15	80060645	80060646	chr15:80060646:C:T	rs117127218	C	T	C	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr15	80290776	80290777	chr15:80290777:G:A	rs4238515	G	A	G	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr15	80297855	80297856	chr15:80297856:T:G	rs12594390	T	G	T	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr15	80319445	80319446	chr15:80319446:T:C	rs8025245	T	C	T	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr15	80484251	80484252	chr15:80484252:A:G	rs61144989	A	G	G	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr15	80503667	80503668	chr15:80503668:T:C	rs28687121	T	C	C	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr15	80549266	80549267	chr15:80549267:A:C	rs1229370938	A	C	A	Hoxd9.mouse_homeodomain_1	6	1	+	7.889898683853121	6.1428148690123106	ACCATAAAA
chr15	80614709	80614710	chr15:80614710:G:C	rs112804954	G	C	G	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr15	80726245	80726246	chr15:80726246:C:T	rs7174250	C	T	C	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr15	80846233	80846234	chr15:80846234:A:G	rs10152172	A	G	A	Hoxd9.mouse_homeodomain_1	7	1	+	7.45645131454733	0.752625367955599	CCCATAAAC
chr15	81096155	81096156	chr15:81096156:G:A	rs12907682	G	A	G	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr15	81185181	81185182	chr15:81185182:C:G	rs9920793	C	G	G	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr15	81294744	81294745	chr15:81294745:A:C	rs17875492	A	C	C	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr15	81294772	81294773	chr15:81294773:T:G	rs976466445	T	G	T	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr15	81304210	81304211	chr15:81304211:C:T	rs17875523	C	T	T	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr15	81304220	81304221	chr15:81304221:T:C	rs3898677	T	C	C	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr15	81304248	81304249	chr15:81304249:T:G	rs3848180	T	G	G	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr15	81530227	81530228	chr15:81530228:G:A	rs7182051	G	A	A	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr15	81532670	81532671	chr15:81532671:T:C	rs35917473	T	C	T	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr15	81723775	81723776	chr15:81723776:C:T	rs16973083	C	T	C	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr15	81932736	81932737	chr15:81932737:C:A	rs17349766	C	A	A	Hoxd9.mouse_homeodomain_1	2	1	+	8.98901893988973	8.287463081002919	CCCATAAAA
chr15	82410467	82410468	chr15:82410468:C:T	rs879131649	C	T	N	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr15	82548042	82548043	chr15:82548043:A:G	rs803688	A	G	a	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr15	82705190	82705191	chr15:82705191:C:G	rs12911134	C	G	C	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr15	82870856	82870857	chr15:82870857:G:A	rs1256443	G	A	G	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr15	83290489	83290490	chr15:83290490:A:G	rs7180692	A	G	G	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr15	83960324	83960325	chr15:83960325:A:T	rs6603009	A	T	T	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr15	84130646	84130647	chr15:84130647:A:G	rs112804275	A	G	.	Hoxd9.mouse_homeodomain_1	4	1	-	7.091711387329735	4.436664742467157	CCCATCAAA
chr15	84130650	84130651	chr15:84130651:G:T	rs112294127	G	T	.	Hoxd9.mouse_homeodomain_1	0	1	-	7.091711387329735	5.992591131293127	CCCATCAAA
chr15	84163993	84163994	chr15:84163994:G:A	rs1032233541	G	A	.	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr15	84631368	84631369	chr15:84631369:G:T	rs4842977	G	T	T	Hoxd9.mouse_homeodomain_1	2	1	-	8.98901893988973	8.287463081002919	CCCATAAAA
chr15	84632508	84632509	chr15:84632509:C:G	rs563360220	C	G	C	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr15	84632509	84632510	chr15:84632510:T:G	rs188739055	T	G	T	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr15	84632518	84632519	chr15:84632519:A:G	rs2292463	A	G	A	Hoxd9.mouse_homeodomain_1	8	1	+	8.099252595576761	6.632925487091506	GCCATTAAA
chr15	84712402	84712403	chr15:84712403:T:C	rs76338965	T	C	T	Hoxd9.mouse_homeodomain_1	8	1	-	7.889898683853121	6.423571575367866	ACCATAAAA
chr15	84872139	84872140	chr15:84872140:G:A	rs12101610	G	A	G	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr15	84872154	84872155	chr15:84872155:T:C	rs12900463	T	C	C	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr15	85124751	85124752	chr15:85124752:T:G	rs11852268	T	G	T	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr15	85165157	85165158	chr15:85165158:C:T	rs9652519	C	T	C	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr15	85178425	85178426	chr15:85178426:G:A	rs8029896	G	A	.	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr15	85409095	85409096	chr15:85409096:A:G	rs7183745	A	G	A	Hoxd9.mouse_homeodomain_1	4	1	-	8.027213970992095	5.372167326129518	CACATAAAA
chr15	85521736	85521737	chr15:85521737:A:G	rs3743321	A	G	G	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr15	85533957	85533958	chr15:85533958:A:G	rs2279168	A	G	A	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr15	85544661	85544662	chr15:85544662:G:A	rs6496082	G	A	G	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr15	85619642	85619643	chr15:85619643:G:A	rs4843086	G	A	G	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr15	85742349	85742350	chr15:85742350:A:G	rs1226410444	A	G	A	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr15	85780519	85780520	chr15:85780520:G:A	rs72751891	G	A	G	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr15	85838214	85838215	chr15:85838215:C:T	rs62023028	C	T	C	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr15	86021940	86021941	chr15:86021941:A:G	rs72748053	A	G	G	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr15	86125925	86125926	chr15:86125926:A:T	rs959453	A	T	T	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr15	86179527	86179528	chr15:86179528:C:T	rs11635258	C	T	C	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr15	86237047	86237048	chr15:86237048:A:G	rs35954253	A	G	G	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr15	86627922	86627923	chr15:86627923:C:A	rs16977879	C	A	C	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr15	86906115	86906116	chr15:86906116:A:T	rs112539737	A	T	A	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr15	87036594	87036595	chr15:87036595:T:C	rs2701422	T	C	T	Hoxd9.mouse_homeodomain_1	4	1	+	8.678783717710262	6.023737072847684	GCCATAAAA
chr15	87100101	87100102	chr15:87100102:G:A	rs118050799	G	A	G	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr15	87213306	87213307	chr15:87213307:G:A	rs143545231	G	A	G	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr15	87478560	87478561	chr15:87478561:G:A	rs11857551	G	A	G	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr15	87490874	87490875	chr15:87490875:C:T	rs77958216	C	T	C	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr15	87579831	87579832	chr15:87579832:A:G	rs74026859	A	G	A	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr15	87597525	87597526	chr15:87597526:C:G	rs79345074	C	G	C	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr15	87618336	87618337	chr15:87618337:G:A	rs4611422	G	A	A	Hoxd9.mouse_homeodomain_1	1	1	-	7.9772278588234515	6.662425944490444	GCAATAAAA
chr15	87706588	87706589	chr15:87706589:C:A	rs4641710	C	A	A	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr15	87970930	87970931	chr15:87970931:T:G	rs9944243	T	G	T	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr15	88113694	88113695	chr15:88113695:T:G	rs1863492	T	G	T	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr15	88371085	88371086	chr15:88371086:C:G	rs73448907	C	G	C	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr15	88390476	88390477	chr15:88390477:A:C	rs12595043	A	C	C	Hoxd9.mouse_homeodomain_1	7	1	+	7.716978748812629	4.827562978782042	GACATAAAA
chr15	88570645	88570646	chr15:88570646:T:C	rs13329353	T	C	T	Hoxd9.mouse_homeodomain_1	7	1	-	8.287463081002919	1.5836371344111884	CCAATAAAA
chr15	88609684	88609685	chr15:88609685:C:T	rs113519248	C	T	T	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr15	88654846	88654847	chr15:88654847:G:A	rs12592469	G	A	G	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr15	89023882	89023883	chr15:89023883:G:A	rs79412481	G	A	G	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr15	89052286	89052287	chr15:89052287:A:G	rs932066	A	G	G	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr15	89111532	89111533	chr15:89111533:A:G	rs293401	A	G	A	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr15	89211632	89211633	chr15:89211633:C:T	rs950540	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	-	7.212456609225008	6.423571575367866	GCCATAAAG
chr15	89403167	89403168	chr15:89403168:G:C	rs72746704	G	C	G	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr15	89453006	89453007	chr15:89453007:G:A	rs62020807	G	A	G	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr15	89532132	89532133	chr15:89532133:G:A	rs116949109	G	A	A	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr15	89551744	89551745	chr15:89551745:A:T	rs532877065	A	T	A	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr15	89569269	89569270	chr15:89569270:G:A	rs4485330	G	A	G	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr15	89773268	89773269	chr15:89773269:T:C	rs1472525845	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.45645131454733	6.122372714684838	CCCATAAAC
chr15	89852744	89852745	chr15:89852745:C:A	rs893613	C	A	C	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr15	89864200	89864201	chr15:89864201:T:C	rs16943673	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.678783717710262	7.34470511784777	GCCATAAAA
chr15	89875003	89875004	chr15:89875004:A:T	rs34956062	A	T	A	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr15	89916815	89916816	chr15:89916816:C:T	rs148404173	C	T	C	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr15	89965262	89965263	chr15:89965263:C:A	rs76862957	C	A	A	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr15	90039673	90039674	chr15:90039674:G:A	rs117878474	G	A	G	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr15	90131412	90131413	chr15:90131413:C:T	rs11637834	C	T	C	Hoxd9.mouse_homeodomain_1	6	1	+	7.241935125048919	6.099603169859144	CCCATACAA
chr15	90204744	90204745	chr15:90204745:G:A	rs11073911	G	A	G	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr15	90253860	90253861	chr15:90253861:C:T	rs12914775	C	T	C	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr15	90380729	90380730	chr15:90380730:G:A	rs76176014	G	A	G	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr15	90400238	90400239	chr15:90400239:G:A	rs8030390	G	A	A	Hoxd9.mouse_homeodomain_1	1	1	-	8.678783717710262	7.363981803377255	GCCATAAAA
chr15	90406671	90406672	chr15:90406672:T:G	rs11852549	T	G	T	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr15	90414896	90414897	chr15:90414897:T:G	rs2601203	T	G	G	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr15	90414926	90414927	chr15:90414927:G:A	rs772168623	G	A	G	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr15	90630468	90630469	chr15:90630469:G:T	rs6496712	G	T	.	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr15	90909900	90909901	chr15:90909901:C:T	rs3784779	C	T	C	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr15	91053166	91053167	chr15:91053167:T:C	rs9920001	T	C	t	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr15	91055019	91055020	chr15:91055020:T:C	rs12909705	T	C	t	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr15	91343841	91343842	chr15:91343842:G:C	rs1858998	G	C	G	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr15	91474397	91474398	chr15:91474398:T:C	rs77890182	T	C	C	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr15	91499021	91499022	chr15:91499022:C:A	rs55934682	C	A	C	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr15	91515482	91515483	chr15:91515483:T:C	rs60413968	T	C	T	Hoxd9.mouse_homeodomain_1	5	1	-	7.889898683853121	1.5157089656065659	ACCATAAAA
chr15	91515498	91515499	chr15:91515499:G:A	rs4561445	G	A	G	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr15	91536867	91536868	chr15:91536868:T:C	chr15:91536868:T:C	T	C	T	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr15	91538210	91538211	chr15:91538211:G:A	rs7498047	G	A	A	Hoxd9.mouse_homeodomain_1	3	1	+	7.075409217893736	8.409487817756228	CCCGTTAAA
chr15	91561367	91561368	chr15:91561368:C:G	rs6496831	C	G	G	Hoxd9.mouse_homeodomain_1	0	1	-	8.099252595576761	8.409487817756228	GCCATTAAA
chr15	91849943	91849944	chr15:91849944:G:A	rs558381555	G	A	G	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr15	91878652	91878653	chr15:91878653:A:G	rs12905016	A	G	G	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr15	92142876	92142877	chr15:92142877:T:C	rs185100045	T	C	T	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr15	92160949	92160950	chr15:92160950:A:G	rs2238342	A	G	G	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr15	92326052	92326053	chr15:92326053:G:A	rs36089621	G	A	G	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr15	92326060	92326061	chr15:92326061:A:T	rs7171546	A	T	A	Hoxd9.mouse_homeodomain_1	3	1	+	7.707931958869418	5.704450822060773	CCAATTAAA
chr15	92373949	92373950	chr15:92373950:C:T	rs7172682	C	T	C	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr15	92392938	92392939	chr15:92392939:C:T	rs3759916	C	T	T	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr15	92553583	92553584	chr15:92553584:G:A	rs1378598	G	A	G	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr15	92617446	92617447	chr15:92617447:G:A	rs71412554	G	A	G	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr15	92681368	92681369	chr15:92681369:T:C	rs285726	T	C	T	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr15	92840117	92840118	chr15:92840118:C:T	rs8030383	C	T	t	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr15	92840135	92840136	chr15:92840136:G:A	rs80053306	G	A	g	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr15	92840146	92840147	chr15:92840147:A:T	rs8031154	A	T	a	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr15	92903307	92903308	chr15:92903308:G:C	rs937072271	G	C	G	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr15	93359922	93359923	chr15:93359923:C:T	rs775646949	C	T	C	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr15	93477552	93477553	chr15:93477553:G:A	rs1542708	G	A	A	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr15	93479647	93479648	chr15:93479648:T:C	rs62046487	T	C	T	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr15	93523607	93523608	chr15:93523608:C:A	chr15:93523608:C:A	C	A	C	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr15	93704589	93704590	chr15:93704590:C:T	rs34027089	C	T	C	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr15	93825464	93825465	chr15:93825465:A:G	rs6497143	A	G	A	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr15	93882071	93882072	chr15:93882072:G:A	rs4587926	G	A	G	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr15	93900617	93900618	chr15:93900618:G:C	rs117840313	G	C	G	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr15	94187406	94187407	chr15:94187407:A:G	rs28808130	A	G	a	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr15	94230375	94230376	chr15:94230376:T:C	rs2388527	T	C	T	Hoxd9.mouse_homeodomain_1	6	1	-	8.027213970992095	1.3233880244003648	CACATAAAA
chr15	94232324	94232325	chr15:94232325:A:G	rs372909310	A	G	A	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr15	94259575	94259576	chr15:94259576:A:G	rs8036788	A	G	A	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr15	94285236	94285237	chr15:94285237:G:A	rs4984343	G	A	A	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr15	94443534	94443535	chr15:94443535:C:T	chr15:94443535:C:T	C	T	C	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr15	94698183	94698184	chr15:94698184:C:T	rs34234069	C	T	C	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr15	94698193	94698194	chr15:94698194:G:A	rs8040433	G	A	A	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr15	94834642	94834643	chr15:94834643:C:G	rs7165511	C	G	C	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr15	94964741	94964742	chr15:94964742:C:G	rs77336521	C	G	C	Hoxd9.mouse_homeodomain_1	0	1	-	7.9772278588234515	8.287463081002919	GCAATAAAA
chr15	95286294	95286295	chr15:95286295:T:A	rs1994147	T	A	T	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr15	95409725	95409726	chr15:95409726:A:G	rs11629709	A	G	A	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr15	95489446	95489447	chr15:95489447:T:C	rs1424740	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.1462160923678635	5.81213749250537	GCCATAAAC
chr15	95549502	95549503	chr15:95549503:T:C	rs1834210	T	C	C	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr15	95557658	95557659	chr15:95557659:G:A	rs112697014	G	A	G	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr15	95557693	95557694	chr15:95557694:A:G	rs7183500	A	G	G	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr15	95638711	95638712	chr15:95638712:G:T	rs11073442	G	T	T	Hoxd9.mouse_homeodomain_1	0	1	-	7.091711387329735	5.992591131293127	CCCATCAAA
chr15	95645475	95645476	chr15:95645476:C:T	rs12232372	C	T	C	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr15	95659387	95659388	chr15:95659388:T:C	rs2397824	T	C	C	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr15	95872617	95872618	chr15:95872618:G:A	rs541722914	G	A	G	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr15	96120431	96120432	chr15:96120432:T:C	rs35371113	T	C	T	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr15	96297353	96297354	chr15:96297354:G:C	rs4984431	G	C	G	Hoxd9.mouse_homeodomain_1	1	1	-	8.099252595576761	1.6897193667943955	GCCATTAAA
chr15	96336504	96336505	chr15:96336505:T:C	rs80336039	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.241935125048919	5.907856525186427	CCCATACAA
chr15	96474461	96474462	chr15:96474462:A:G	rs181010969	A	G	A	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr15	96848633	96848634	chr15:96848634:A:G	rs56026505	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	7.9772278588234515	6.643149258960959	GCAATAAAA
chr15	96882655	96882656	chr15:96882656:T:C	rs57259749	T	C	T	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr15	97083421	97083422	chr15:97083422:C:G	rs74036325	C	G	C	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr15	97235451	97235452	chr15:97235452:A:T	rs139005914	A	T	A	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr15	97815893	97815894	chr15:97815894:A:G	rs56353520	A	G	A	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr15	97862059	97862060	chr15:97862060:A:C	rs11636606	A	C	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.287463081002919	1.7119549767994378	CCAATAAAA
chr15	98073969	98073970	chr15:98073970:C:T	rs2086365	C	T	c	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr15	98101992	98101993	chr15:98101993:G:A	rs11855844	G	A	-	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr15	98124308	98124309	chr15:98124309:C:T	rs28566832	C	T	C	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr15	98160779	98160780	chr15:98160780:G:A	rs7166692	G	A	G	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr15	98321005	98321006	chr15:98321006:G:A	rs1982260	G	A	G	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr15	98428589	98428590	chr15:98428590:C:A	rs536626591	C	A	.	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr15	98428607	98428608	chr15:98428608:G:A	rs36016710	G	A	.	Hoxd9.mouse_homeodomain_1	2	1	-	7.654940340027237	1.1674998824035994	CCCGTAAAA
chr15	98561088	98561089	chr15:98561089:G:T	rs6598523	G	T	T	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr15	98561102	98561103	chr15:98561103:C:T	rs6598524	C	T	T	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr15	98563950	98563951	chr15:98563951:A:G	rs183420252	A	G	A	Hoxd9.mouse_homeodomain_1	4	1	-	7.1462160923678635	4.491169447505284	GCCATAAAC
chr15	98621313	98621314	chr15:98621314:T:C	rs7164474	T	C	C	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr15	98852581	98852582	chr15:98852582:C:A	rs1298599265	C	A	C	Hoxd9.mouse_homeodomain_1	1	1	+	7.45645131454733	6.494646345649697	CCCATAAAC
chr15	98852604	98852605	chr15:98852605:C:G	rs8035410	C	G	C	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr15	98852942	98852943	chr15:98852943:A:T	rs901424042	A	T	A	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr15	98860722	98860723	chr15:98860723:C:T	rs8030777	C	T	T	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr15	98917632	98917633	chr15:98917633:A:G	rs10048024	A	G	G	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr15	99016830	99016831	chr15:99016831:C:T	rs7167749	C	T	C	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr15	99016831	99016832	chr15:99016832:A:C	rs1848555	A	C	A	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr15	99075932	99075933	chr15:99075933:G:A	rs72754896	G	A	G	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr15	99089204	99089205	chr15:99089205:G:C	rs36132317	G	C	c	Hoxd9.mouse_homeodomain_1	3	1	+	7.654940340027237	2.4135108356862487	CCCGTAAAA
chr15	99202004	99202005	chr15:99202005:T:C	rs2034645	T	C	T	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr15	99202357	99202358	chr15:99202358:T:C	rs2623178	T	C	T	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr15	99202371	99202372	chr15:99202372:G:A	rs2602037	G	A	G	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr15	99224947	99224948	chr15:99224948:C:G	rs28712012	C	G	C	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr15	99286421	99286422	chr15:99286422:C:T	rs140959362	C	T	c	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr15	99409755	99409756	chr15:99409756:C:T	rs6598241	C	T	T	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr15	99438953	99438954	chr15:99438954:A:G	rs8029754	A	G	A	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr15	99485154	99485155	chr15:99485155:T:C	rs1992485	T	C	T	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr15	99515043	99515044	chr15:99515044:C:T	rs79329596	C	T	C	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr15	99515044	99515045	chr15:99515045:A:G	rs73478500	A	G	A	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr15	99961001	99961002	chr15:99961002:A:C	rs73478656	A	C	A	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr15	99966199	99966200	chr15:99966200:C:G	rs113966674	C	G	C	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr15	100003907	100003908	chr15:100003908:C:T	rs12904962	C	T	T	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr15	100047404	100047405	chr15:100047405:C:T	rs28440071	C	T	C	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr15	100060072	100060073	chr15:100060073:T:A	rs12901866	T	A	T	Hoxd9.mouse_homeodomain_1	8	1	-	8.98901893988973	6.056505815123662	CCCATAAAA
chr15	100094684	100094685	chr15:100094685:A:G	rs58082560	A	G	A	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr15	100118235	100118236	chr15:100118236:C:A	rs77651146	C	A	C	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr15	100183899	100183900	chr15:100183900:A:C	rs75455822	A	C	A	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr15	100252024	100252025	chr15:100252025:G:A	rs79623631	G	A	G	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr15	100330780	100330781	chr15:100330781:T:C	rs117279171	T	C	T	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr15	100335184	100335185	chr15:100335185:G:A	rs2587837	G	A	G	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr15	100457537	100457538	chr15:100457538:A:C	rs972731	A	C	A	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr15	100596845	100596846	chr15:100596846:G:A	rs140853736	G	A	G	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr15	100661055	100661056	chr15:100661056:C:T	rs74409635	C	T	C	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr15	100725017	100725018	chr15:100725018:A:G	rs59128478	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.98901893988973	7.654940340027237	CCCATAAAA
chr15	100728525	100728526	chr15:100728526:A:G	rs1596161	A	G	A	Hoxd9.mouse_homeodomain_1	7	1	+	7.091711387329735	0.38788544073800313	CCCATCAAA
chr15	100833961	100833962	chr15:100833962:C:T	rs11630278	C	T	C	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr15	100919220	100919221	chr15:100919221:G:T	rs553278513	G	T	A	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr15	100952783	100952784	chr15:100952784:A:G	rs12441903	A	G	A	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr15	101028237	101028238	chr15:101028238:G:A	rs140214759	G	A	G	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr15	101031074	101031075	chr15:101031075:T:C	rs7170690	T	C	T	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr15	101139550	101139551	chr15:101139551:C:T	rs28360852	C	T	C	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr15	101139559	101139560	chr15:101139560:T:C	rs11856385	T	C	T	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr15	101181005	101181006	chr15:101181006:C:T	rs142134640	C	T	C	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr15	101206538	101206539	chr15:101206539:A:C	rs8040681	A	C	A	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr15	101206544	101206545	chr15:101206545:T:A	rs376509241	T	A	T	Hoxd9.mouse_homeodomain_1	5	1	-	8.027213970992095	7.447682848858594	CACATAAAA
chr15	101245764	101245765	chr15:101245765:T:C	rs8038272	T	C	T	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr15	101247063	101247064	chr15:101247064:A:G	rs9672295	A	G	A	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr15	101306885	101306886	chr15:101306886:C:T	rs2624981	C	T	C	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr15	101319213	101319214	chr15:101319214:C:T	rs34256009	C	T	C	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr15	101323262	101323263	chr15:101323263:T:C	rs79999475	T	C	T	Hoxd9.mouse_homeodomain_1	4	1	+	7.212456609225008	4.557409964362429	GCCATAAAG
chr15	101347346	101347347	chr15:101347347:C:G	rs60289824	C	G	C	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr15	101389253	101389254	chr15:101389254:G:A	rs59311420	G	A	G	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr15	101411617	101411618	chr15:101411618:A:C	rs11633098	A	C	C	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr15	101447695	101447696	chr15:101447696:A:G	rs7181983	A	G	A	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr15	101455724	101455725	chr15:101455725:C:G	rs74511207	C	G	C	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr15	101455732	101455733	chr15:101455733:C:T	chr15:101455733:C:T	C	T	C	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr16	383241	383242	chr16:383242:C:T	rs763147	C	T	T	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr16	386845	386846	chr16:386846:G:A	rs370984388	G	A	G	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr16	386882	386883	chr16:386883:C:T	rs13331152	C	T	C	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr16	424179	424180	chr16:424180:G:A	rs3760048	G	A	G	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr16	527080	527081	chr16:527081:G:A	rs544801992	G	A	G	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr16	534025	534026	chr16:534026:C:T	rs34026420	C	T	C	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr16	534037	534038	chr16:534038:T:G	rs11646982	T	G	T	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr16	623276	623277	chr16:623277:C:T	rs763011	C	T	C	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr16	713030	713031	chr16:713031:A:C	chr16:713031:A:C	A	C	A	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr16	832941	832942	chr16:832942:G:A	rs574480919	G	A	G	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr16	900667	900668	chr16:900668:C:G	rs147514472	C	G	C	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr16	907884	907885	chr16:907885:A:G	rs4984969	A	G	A	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr16	1083167	1083168	chr16:1083168:C:T	rs138000399	C	T	.	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr16	1083180	1083181	chr16:1083181:G:A	rs752664046	G	A	.	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr16	1083191	1083192	chr16:1083192:G:C	rs116220617	G	C	.	Hoxd9.mouse_homeodomain_1	0	1	-	8.287463081002919	7.9772278588234515	CCAATAAAA
chr16	1109816	1109817	chr16:1109817:C:T	rs60522273	C	T	C	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr16	1193662	1193663	chr16:1193663:C:T	rs145534062	C	T	C	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr16	1193691	1193692	chr16:1193692:C:T	rs7191370	C	T	C	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr16	1224825	1224826	chr16:1224826:C:T	rs34509125	C	T	.	Hoxd9.mouse_homeodomain_1	8	1	+	7.1462160923678635	5.746270592944195	GCCATAAAC
chr16	1370811	1370812	chr16:1370812:A:G	rs28525444	A	G	G	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr16	1457840	1457841	chr16:1457841:C:T	rs8061743	C	T	T	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr16	1457841	1457842	chr16:1457842:G:C	rs8060503	G	C	G	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr16	1469887	1469888	chr16:1469888:A:T	rs112570032	A	T	A	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr16	1784722	1784723	chr16:1784723:G:A	rs12149777	G	A	G	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr16	1978675	1978676	chr16:1978676:A:G	rs34968293	A	G	G	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr16	2436613	2436614	chr16:2436614:C:T	rs4387603	C	T	C	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr16	2540415	2540416	chr16:2540416:G:A	rs116892143	G	A	G	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr16	2599834	2599835	chr16:2599835:T:G	rs113716221	T	G	t	Hoxd9.mouse_homeodomain_1	2	1	-	7.707931958869418	8.409487817756228	CCAATTAAA
chr16	2649998	2649999	chr16:2649999:C:A	rs11642388	C	A	-	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr16	2771982	2771983	chr16:2771983:G:A	rs201849867	G	A	G	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr16	3065595	3065596	chr16:3065596:C:T	rs144251903	C	T	C	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr16	3065626	3065627	chr16:3065627:A:C	rs1554999	A	C	C	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr16	3191494	3191495	chr16:3191495:A:G	rs541719966	A	G	A	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr16	3191502	3191503	chr16:3191503:C:G	rs117373271	C	G	C	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr16	3579059	3579060	chr16:3579060:A:G	rs1036048700	A	G	A	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr16	3757169	3757170	chr16:3757170:G:A	rs140586932	G	A	G	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr16	3918639	3918640	chr16:3918640:T:A	rs59579508	T	A	T	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr16	3962478	3962479	chr16:3962479:T:C	rs62036942	T	C	T	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr16	4023150	4023151	chr16:4023151:A:G	rs2002487	A	G	A	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr16	4023186	4023187	chr16:4023187:C:T	rs66801518	C	T	C	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr16	4231941	4231942	chr16:4231942:A:G	rs13336225	A	G	G	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr16	4377823	4377824	chr16:4377824:A:C	rs556704342	A	C	A	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr16	4410885	4410886	chr16:4410886:T:C	rs187106832	T	C	T	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr16	4505963	4505964	chr16:4505964:G:C	rs11860985	G	C	G	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr16	4694863	4694864	chr16:4694864:C:T	rs8057623	C	T	.	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr16	4849355	4849356	chr16:4849356:A:T	rs78589989	A	T	a	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr16	4879267	4879268	chr16:4879268:A:G	rs11076854	A	G	A	Hoxd9.mouse_homeodomain_1	8	1	+	8.98901893988973	7.522691831404475	CCCATAAAA
chr16	4948405	4948406	chr16:4948406:T:C	rs9940283	T	C	T	Hoxd9.mouse_homeodomain_1	4	1	+	8.287463081002919	5.632416436140341	CCAATAAAA
chr16	4948415	4948416	chr16:4948416:T:C	rs2908656	T	C	T	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr16	4976482	4976483	chr16:4976483:T:C	rs7191632	T	C	C	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr16	5043704	5043705	chr16:5043705:A:G	rs56373587	A	G	a	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr16	5096979	5096980	chr16:5096980:G:A	rs3890148	G	A	G	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr16	5148406	5148407	chr16:5148407:G:A	rs58898461	G	A	G	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr16	5166958	5166959	chr16:5166959:C:T	rs871296	C	T	c	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr16	5185854	5185855	chr16:5185855:T:C	rs60096950	T	C	T	Hoxd9.mouse_homeodomain_1	5	1	-	7.9772278588234515	1.603038140576896	GCAATAAAA
chr16	5304209	5304210	chr16:5304210:C:T	rs2879844	C	T	T	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr16	5432483	5432484	chr16:5432484:G:A	rs500169	G	A	G	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr16	5537610	5537611	chr16:5537611:C:T	rs8058410	C	T	C	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr16	5575773	5575774	chr16:5575774:A:G	rs4786719	A	G	G	Hoxd9.mouse_homeodomain_1	1	1	+	7.716978748812629	2.2692504889278973	GACATAAAA
chr16	5671664	5671665	chr16:5671665:T:C	rs80076800	T	C	T	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr16	5719524	5719525	chr16:5719525:C:G	rs7199215	C	G	C	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr16	5779438	5779439	chr16:5779439:C:T	rs7198618	C	T	T	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr16	5871820	5871821	chr16:5871821:G:A	rs58623200	G	A	G	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr16	6099242	6099243	chr16:6099243:G:A	rs9930676	G	A	G	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr16	6165960	6165961	chr16:6165961:T:G	rs74006911	T	G	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.091711387329735	0.5162032831262539	CCCATCAAA
chr16	6511228	6511229	chr16:6511229:A:G	rs12444030	A	G	G	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr16	6684129	6684130	chr16:6684130:A:G	rs191639984	A	G	A	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr16	6728688	6728689	chr16:6728689:T:C	rs12921288	T	C	T	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr16	6846647	6846648	chr16:6846648:A:G	rs6500852	A	G	A	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr16	6877315	6877316	chr16:6877316:A:C	rs67982830	A	C	A	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr16	6877468	6877469	chr16:6877469:T:G	rs8059403	T	G	T	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr16	6910608	6910609	chr16:6910609:T:G	rs12934274	T	G	T	Hoxd9.mouse_homeodomain_1	6	1	-	8.98901893988973	7.241935125048919	CCCATAAAA
chr16	6914084	6914085	chr16:6914085:T:G	rs78686779	T	G	T	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr16	6914090	6914091	chr16:6914091:C:A	rs78871680	C	A	C	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr16	6946312	6946313	chr16:6946313:C:G	rs56368623	C	G	C	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr16	6962199	6962200	chr16:6962200:A:G	rs11642966	A	G	A	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr16	7396470	7396471	chr16:7396471:G:A	rs8050740	G	A	A	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr16	7471465	7471466	chr16:7471466:C:G	chr16:7471466:C:G	C	G	C	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr16	7517387	7517388	chr16:7517388:G:T	rs62012729	G	T	G	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr16	7533704	7533705	chr16:7533705:G:A	rs13336381	G	A	G	Hoxd9.mouse_homeodomain_1	1	1	-	7.241935125048919	5.927133210715912	CCCATACAA
chr16	7571804	7571805	chr16:7571805:G:A	rs3826221	G	A	A	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr16	7572566	7572567	chr16:7572567:C:T	rs34670697	C	T	c	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr16	7646688	7646689	chr16:7646689:A:G	rs112717264	A	G	A	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr16	7744780	7744781	chr16:7744781:C:T	rs146216318	C	T	C	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr16	7964495	7964496	chr16:7964496:A:G	rs62018785	A	G	G	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr16	8044269	8044270	chr16:8044270:G:C	rs11641562	G	C	G	Hoxd9.mouse_homeodomain_1	0	1	+	7.9772278588234515	8.287463081002919	GCAATAAAA
chr16	8249209	8249210	chr16:8249210:C:T	rs9302865	C	T	T	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr16	8258165	8258166	chr16:8258166:T:A	rs13339579	T	A	A	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr16	8447260	8447261	chr16:8447261:G:A	rs8062116	G	A	G	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr16	8512758	8512759	chr16:8512759:T:C	rs75063836	T	C	C	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr16	8674273	8674274	chr16:8674274:A:C	rs527712748	A	C	A	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr16	8728982	8728983	chr16:8728983:C:G	rs4984997	C	G	G	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr16	8791908	8791909	chr16:8791909:C:G	rs532640580	C	G	C	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr16	8791934	8791935	chr16:8791935:G:A	rs72766359	G	A	G	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr16	8804600	8804601	chr16:8804601:A:G	rs8053440	A	G	A	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr16	8848234	8848235	chr16:8848235:A:G	rs77027373	A	G	A	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr16	8890411	8890412	chr16:8890412:C:T	rs30781	C	T	T	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr16	8957089	8957090	chr16:8957090:T:C	rs76161145	T	C	T	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr16	9029525	9029526	chr16:9029526:G:A	rs7188193	G	A	A	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr16	9072688	9072689	chr16:9072689:T:C	rs78463824	T	C	T	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr16	9159395	9159396	chr16:9159396:T:C	rs2941363	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.287463081002919	6.953384481140425	CCAATAAAA
chr16	9235826	9235827	chr16:9235827:G:A	rs35158055	G	A	G	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr16	9259129	9259130	chr16:9259130:A:C	rs2941354	A	C	A	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr16	9308738	9308739	chr16:9308739:C:G	rs72776975	C	G	C	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr16	9308753	9308754	chr16:9308754:G:A	rs35318	G	A	A	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr16	9519451	9519452	chr16:9519452:A:C	rs4781339	A	C	A	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr16	9567855	9567856	chr16:9567856:T:C	rs17547339	T	C	T	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr16	9598428	9598429	chr16:9598429:C:T	rs118019061	C	T	C	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr16	9773111	9773112	chr16:9773112:T:C	rs113253890	T	C	T	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr16	9773139	9773140	chr16:9773140:T:A	rs1261938133	T	A	T	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr16	9830558	9830559	chr16:9830559:A:G	rs72781975	A	G	A	Hoxd9.mouse_homeodomain_1	4	1	-	7.716978748812629	5.061932103950051	GACATAAAA
chr16	9971335	9971336	chr16:9971336:A:T	rs12927371	A	T	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.027213970992095	6.023732834183452	CACATAAAA
chr16	10001645	10001646	chr16:10001646:C:T	rs8043728	C	T	T	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr16	10079890	10079891	chr16:10079891:T:C	rs7192140	T	C	T	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr16	10250558	10250559	chr16:10250559:C:A	chr16:10250559:C:A	C	A	C	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr16	10263223	10263224	chr16:10263224:G:C	rs10852285	G	C	C	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr16	10286134	10286135	chr16:10286135:A:G	rs11642024	A	G	A	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr16	10521814	10521815	chr16:10521815:G:A	rs77236618	G	A	G	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr16	10610842	10610843	chr16:10610843:T:C	rs12149191	T	C	T	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr16	10723926	10723927	chr16:10723927:T:C	rs547049038	T	C	T	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr16	10723954	10723955	chr16:10723955:G:A	rs1641786	G	A	G	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr16	10741259	10741260	chr16:10741260:T:C	rs2697649	T	C	T	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr16	10812689	10812690	chr16:10812690:G:T	rs9937483	G	T	G	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr16	10869068	10869069	chr16:10869069:T:C	rs73499447	T	C	T	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr16	10956435	10956436	chr16:10956436:C:G	rs796438744	C	G	C	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr16	11009117	11009118	chr16:11009118:A:G	rs76048625	A	G	A	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr16	11038775	11038776	chr16:11038776:G:T	rs720130	G	T	T	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr16	11059639	11059640	chr16:11059640:G:C	rs74760338	G	C	G	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr16	11159625	11159626	chr16:11159626:G:A	rs27838	G	A	A	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr16	11257388	11257389	chr16:11257389:G:A	rs35407301	G	A	G	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr16	11257392	11257393	chr16:11257393:A:G	rs35780371	A	G	A	Hoxd9.mouse_homeodomain_1	1	1	+	8.027213970992095	2.5794857111073646	CACATAAAA
chr16	11274049	11274050	chr16:11274050:G:C	rs2857764	G	C	C	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr16	11276740	11276741	chr16:11276741:C:G	rs8060767	C	G	C	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr16	11348170	11348171	chr16:11348171:T:C	rs7195536	T	C	T	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr16	11349846	11349847	chr16:11349847:C:G	rs1222167537	C	G	C	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr16	11370742	11370743	chr16:11370743:T:G	rs28660409	T	G	T	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr16	11388390	11388391	chr16:11388391:C:T	rs4638601	C	T	C	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr16	11390872	11390873	chr16:11390873:C:A	rs11646230	C	A	C	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr16	11394068	11394069	chr16:11394069:G:T	rs12599081	G	T	T	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr16	11414025	11414026	chr16:11414026:C:A	rs11640250	C	A	C	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr16	11422545	11422546	chr16:11422546:T:C	rs4627378	T	C	C	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr16	11592070	11592071	chr16:11592071:C:T	rs8054395	C	T	C	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr16	11670224	11670225	chr16:11670225:G:C	chr16:11670225:G:C	G	C	-	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr16	11670225	11670226	chr16:11670226:A:G	rs8191277	A	G	G	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr16	11727851	11727852	chr16:11727852:G:A	rs10492852	G	A	G	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr16	11740815	11740816	chr16:11740816:T:A	rs57386514	T	A	T	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr16	11781900	11781901	chr16:11781901:T:C	rs16958657	T	C	T	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr16	11781936	11781937	chr16:11781937:T:C	rs547411197	T	C	T	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr16	11797839	11797840	chr16:11797840:C:T	rs143964837	C	T	C	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr16	11800197	11800198	chr16:11800198:A:T	rs2160184	A	T	A	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr16	11959277	11959278	chr16:11959278:T:C	rs426424	T	C	c	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr16	11980864	11980865	chr16:11980865:A:G	rs370374	A	G	A	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr16	12044239	12044240	chr16:12044240:A:G	rs1641833	A	G	G	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr16	12188402	12188403	chr16:12188403:G:A	rs995045260	G	A	G	Hoxd9.mouse_homeodomain_1	1	1	-	8.099252595576761	6.784450681243753	GCCATTAAA
chr16	12345512	12345513	chr16:12345513:T:C	rs4781207	T	C	C	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr16	12359051	12359052	chr16:12359052:T:C	rs11645864	T	C	C	Hoxd9.mouse_homeodomain_1	2	1	-	7.9772278588234515	5.2107920602579325	GCAATAAAA
chr16	12398275	12398276	chr16:12398276:C:T	rs8055030	C	T	C	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr16	12473890	12473891	chr16:12473891:G:A	rs7190324	G	A	A	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr16	12487788	12487789	chr16:12487789:T:C	rs3803617	T	C	C	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr16	12562671	12562672	chr16:12562672:T:C	rs12935414	T	C	T	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr16	12582562	12582563	chr16:12582563:A:G	rs11075103	A	G	a	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr16	12588098	12588099	chr16:12588099:G:C	rs11865055	G	C	g	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr16	12603130	12603131	chr16:12603131:G:T	rs6498337	G	T	G	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr16	12755963	12755964	chr16:12755964:C:T	rs8056128	C	T	T	Hoxd9.mouse_homeodomain_1	1	1	+	8.287463081002919	6.972661166669912	CCAATAAAA
chr16	12766374	12766375	chr16:12766375:A:C	rs12598406	A	C	A	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr16	13080744	13080745	chr16:13080745:T:C	rs113495474	T	C	T	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr16	13112745	13112746	chr16:13112746:A:G	rs75044146	A	G	G	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr16	13127789	13127790	chr16:13127790:A:T	rs28406687	A	T	A	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr16	13148835	13148836	chr16:13148836:T:C	rs1862812	T	C	T	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr16	13437593	13437594	chr16:13437594:C:G	rs11075198	C	G	C	Hoxd9.mouse_homeodomain_1	2	1	+	7.1462160923678635	3.6782244349155326	GCCATAAAC
chr16	13438945	13438946	chr16:13438946:C:T	rs756986	C	T	T	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr16	13471716	13471717	chr16:13471717:A:G	rs2078548	A	G	a	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr16	13549042	13549043	chr16:13549043:G:A	rs62027020	G	A	G	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr16	13569436	13569437	chr16:13569437:C:T	rs9923278	C	T	C	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr16	13883908	13883909	chr16:13883909:C:G	rs8049074	C	G	G	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr16	13955869	13955870	chr16:13955870:C:A	rs1646332	C	A	A	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr16	14088210	14088211	chr16:14088211:C:A	rs9921648	C	A	A	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr16	15434565	15434566	chr16:15434566:G:T	rs117905264	G	T	G	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr16	15467458	15467459	chr16:15467459:A:G	rs74427666	A	G	A	Hoxd9.mouse_homeodomain_1	4	1	-	8.98901893988973	6.333972295027152	CCCATAAAA
chr16	15551142	15551143	chr16:15551143:C:T	rs62036868	C	T	C	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr16	15648082	15648083	chr16:15648083:G:C	rs62036923	G	C	G	Hoxd9.mouse_homeodomain_1	2	1	-	8.98901893988973	5.5210272824374	CCCATAAAA
chr16	15702265	15702266	chr16:15702266:A:T	rs62029304	A	T	A	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr16	15793090	15793091	chr16:15793091:T:C	rs8051319	T	C	C	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr16	15803912	15803913	chr16:15803913:C:T	rs76407985	C	T	C	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr16	15807938	15807939	chr16:15807939:T:G	rs9929886	T	G	T	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr16	15947910	15947911	chr16:15947911:G:A	rs4148330	G	A	G	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr16	15960836	15960837	chr16:15960837:A:C	rs215099	A	C	C	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr16	15974411	15974412	chr16:15974412:G:A	rs16967227	G	A	T	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr16	16143896	16143897	chr16:16143897:A:G	rs212093	A	G	a	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr16	16151871	16151872	chr16:16151872:G:A	rs7192634	G	A	A	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr16	16578991	16578992	chr16:16578992:T:A	rs4782111	T	A	.	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr16	17131581	17131582	chr16:17131582:A:C	rs1042405222	A	C	A	Hoxd9.mouse_homeodomain_1	2	1	+	7.9772278588234515	8.678783717710262	GCAATAAAA
chr16	17245643	17245644	chr16:17245644:T:C	rs1379655	T	C	T	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr16	17302740	17302741	chr16:17302741:G:T	rs1379652	G	T	T	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr16	17382336	17382337	chr16:17382337:A:G	rs67645629	A	G	G	Hoxd9.mouse_homeodomain_1	6	1	+	8.98901893988973	2.285192993297999	CCCATAAAA
chr16	17383342	17383343	chr16:17383343:C:T	rs8049872	C	T	C	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr16	17458130	17458131	chr16:17458131:C:G	rs75975884	C	G	C	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr16	17484761	17484762	chr16:17484762:C:T	rs74014010	C	T	C	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr16	17828185	17828186	chr16:17828186:A:C	chr16:17828186:A:C	A	C	A	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr16	17828205	17828206	chr16:17828206:A:C	rs28478272	A	C	A	Hoxd9.mouse_homeodomain_1	6	1	+	7.674217025556723	5.927133210715912	CTCATAAAA
chr16	17828214	17828215	chr16:17828215:C:G	rs4553614	C	G	C	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr16	19067502	19067503	chr16:19067503:G:T	rs116281108	G	T	G	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr16	19085761	19085762	chr16:19085762:C:T	rs57568760	C	T	C	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr16	19143688	19143689	chr16:19143689:C:T	rs72779541	C	T	C	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr16	19170222	19170223	chr16:19170223:C:T	rs8054088	C	T	C	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr16	19393322	19393323	chr16:19393323:A:G	rs4780805	A	G	G	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr16	19393353	19393354	chr16:19393354:A:G	rs116010920	A	G	T	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr16	19433657	19433658	chr16:19433658:G:C	rs12597885	G	C	C	Hoxd9.mouse_homeodomain_1	1	1	-	7.9772278588234515	1.5676946300410868	GCAATAAAA
chr16	19708188	19708189	chr16:19708189:C:T	rs768757015	C	T	C	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr16	19831624	19831625	chr16:19831625:G:A	rs1292635	G	A	G	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr16	20173194	20173195	chr16:20173195:G:A	rs28645474	G	A	A	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr16	20203489	20203490	chr16:20203490:A:G	rs4450405	A	G	g	Hoxd9.mouse_homeodomain_1	3	1	+	7.522691831404475	6.188613231541982	CCCATAAAG
chr16	20203498	20203499	chr16:20203499:G:A	rs4357946	G	A	a	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr16	20236885	20236886	chr16:20236886:G:A	rs12599162	G	A	g	Hoxd9.mouse_homeodomain_1	2	1	-	7.075409217893736	0.5879687602700975	CCCGTTAAA
chr16	20280072	20280073	chr16:20280073:C:G	rs4257211	C	G	C	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr16	20319153	20319154	chr16:20319154:G:T	rs12051331	G	T	G	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr16	20642384	20642385	chr16:20642385:T:A	rs55779610	T	A	T	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr16	20900575	20900576	chr16:20900576:G:C	rs79898703	G	C	g	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr16	21076701	21076702	chr16:21076702:A:C	rs9926773	A	C	A	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr16	21509218	21509219	chr16:21509219:C:T	rs639719	C	T	.	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr16	21716807	21716808	chr16:21716808:G:T	rs215904	G	T	g	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr16	22185161	22185162	chr16:22185162:A:C	rs9939477	A	C	C	Hoxd9.mouse_homeodomain_1	5	1	+	7.241935125048919	5.344627572488923	CCCATACAA
chr16	22189913	22189914	chr16:22189914:G:A	rs9938607	G	A	G	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr16	22189927	22189928	chr16:22189928:A:C	chr16:22189928:A:C	A	C	A	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr16	22192138	22192139	chr16:22192139:C:T	rs115935893	C	T	C	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr16	22585586	22585587	chr16:22585587:G:A	rs367561436	G	A	G	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr16	22638746	22638747	chr16:22638747:G:A	rs989112406	G	A	G	Hoxd9.mouse_homeodomain_1	0	1	+	7.9772278588234515	7.188342824966311	GCAATAAAA
chr16	22666944	22666945	chr16:22666945:G:A	rs144744457	G	A	C	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr16	22666953	22666954	chr16:22666954:G:A	rs866654380	G	A	G	Hoxd9.mouse_homeodomain_1	1	1	-	7.9772278588234515	6.662425944490444	GCAATAAAA
chr16	23132554	23132555	chr16:23132555:A:G	rs2269738	A	G	G	Hoxd9.mouse_homeodomain_1	3	1	+	7.716978748812629	6.382900148950135	GACATAAAA
chr16	23435818	23435819	chr16:23435819:A:C	rs1013945004	A	C	A	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr16	23641314	23641315	chr16:23641315:C:G	rs138200248	C	G	C	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr16	23735348	23735349	chr16:23735349:G:T	rs62029266	G	T	G	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr16	23735376	23735377	chr16:23735377:C:T	rs74012359	C	T	C	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr16	23764218	23764219	chr16:23764219:G:A	rs168970	G	A	A	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr16	23827421	23827422	chr16:23827422:T:A	rs1345827100	T	A	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.409487817756228	6.406006680947584	CCCATTAAA
chr16	23901803	23901804	chr16:23901804:T:C	rs10444991	T	C	C	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr16	24044650	24044651	chr16:24044651:A:G	rs34569235	A	G	A	Hoxd9.mouse_homeodomain_1	4	1	-	8.287463081002919	5.632416436140341	CCAATAAAA
chr16	24142592	24142593	chr16:24142593:G:C	rs23555	G	C	C	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr16	24406449	24406450	chr16:24406450:A:G	rs1001359	A	G	G	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr16	24508344	24508345	chr16:24508345:T:C	rs72783859	T	C	T	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr16	24721819	24721820	chr16:24721820:A:G	rs200541	A	G	G	Hoxd9.mouse_homeodomain_1	8	1	+	7.9772278588234515	6.510900750338196	GCAATAAAA
chr16	24813504	24813505	chr16:24813505:C:T	rs28538643	C	T	C	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr16	24847920	24847921	chr16:24847921:G:C	rs115256762	G	C	G	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr16	24968867	24968868	chr16:24968868:G:A	rs12103073	G	A	G	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr16	24977830	24977831	chr16:24977831:T:G	chr16:24977831:T:G	T	G	T	Hoxd9.mouse_homeodomain_1	7	1	-	7.1462160923678635	4.256800322337277	GCCATAAAC
chr16	25035911	25035912	chr16:25035912:G:A	rs4787670	G	A	G	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr16	25035935	25035936	chr16:25035936:T:C	chr16:25035936:T:C	T	C	T	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr16	25089618	25089619	chr16:25089619:G:A	rs118180343	G	A	G	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr16	25123585	25123586	chr16:25123586:C:T	rs12600303	C	T	C	Hoxd9.mouse_homeodomain_1	2	1	+	7.075409217893736	0.5879687602700975	CCCGTTAAA
chr16	25878623	25878624	chr16:25878624:T:C	rs9936447	T	C	T	Hoxd9.mouse_homeodomain_1	5	1	+	6.943160709270972	5.6253842788444794	CCCATTAAG
chr16	25889176	25889177	chr16:25889177:C:T	rs76649836	C	T	C	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr16	25971266	25971267	chr16:25971267:A:G	rs56077551	A	G	A	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr16	26071194	26071195	chr16:26071195:T:C	rs74013251	T	C	T	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr16	26090558	26090559	chr16:26090559:G:A	rs8058115	G	A	G	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr16	26090588	26090589	chr16:26090589:G:C	rs6497915	G	C	G	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr16	26133653	26133654	chr16:26133654:C:T	rs4480808	C	T	C	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr16	26166772	26166773	chr16:26166773:C:T	rs72782005	C	T	C	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr16	26567412	26567413	chr16:26567413:A:G	rs2520124	A	G	G	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr16	27107405	27107406	chr16:27107406:G:C	rs35781406	G	C	G	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr16	27364895	27364896	chr16:27364896:A:G	rs1029489	A	G	A	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr16	27381620	27381621	chr16:27381621:A:G	rs2040788	A	G	G	Hoxd9.mouse_homeodomain_1	3	1	+	8.98901893988973	7.654940340027237	CCCATAAAA
chr16	27813509	27813510	chr16:27813510:A:C	rs6498038	A	C	C	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr16	28196459	28196460	chr16:28196460:G:C	rs116773825	G	C	G	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr16	28212296	28212297	chr16:28212297:C:T	chr16:28212297:C:T	C	T	C	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr16	28278050	28278051	chr16:28278051:C:T	chr16:28278051:C:T	C	T	C	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr16	29139463	29139464	chr16:29139464:G:A	rs1646119	G	A	.	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr16	29142481	29142482	chr16:29142482:A:G	rs1646113	A	G	.	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr16	29142486	29142487	chr16:29142487:A:G	rs2244752	A	G	.	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr16	29143974	29143975	chr16:29143975:C:T	rs74582532	C	T	.	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr16	29288852	29288853	chr16:29288853:A:G	rs796670392	A	G	.	Hoxd9.mouse_homeodomain_1	7	1	+	7.9772278588234515	1.2734019122317202	GCAATAAAA
chr16	29301745	29301746	chr16:29301746:T:C	rs4788158	T	C	.	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr16	29313188	29313189	chr16:29313189:G:A	rs1447680443	G	A	.	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr16	29710528	29710529	chr16:29710529:C:T	chr16:29710529:C:T	C	T	c	Hoxd9.mouse_homeodomain_1	1	1	+	7.9772278588234515	6.662425944490444	GCAATAAAA
chr16	29710539	29710540	chr16:29710540:C:T	rs754463469	C	T	C	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr16	29710542	29710543	chr16:29710543:T:G	rs1633810	T	G	T	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr16	29949271	29949272	chr16:29949272:T:C	rs4788195	T	C	T	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr16	29975305	29975306	chr16:29975306:T:C	rs62057680	T	C	T	Hoxd9.mouse_homeodomain_1	7	1	-	8.287463081002919	1.5836371344111884	CCAATAAAA
chr16	30377964	30377965	chr16:30377965:T:A	rs1447697504	T	A	T	Hoxd9.mouse_homeodomain_1	4	1	+	8.287463081002919	1.445644633672313	CCAATAAAA
chr16	30400077	30400078	chr16:30400078:G:A	rs1056021411	G	A	G	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr16	30558395	30558396	chr16:30558396:T:C	rs568021543	T	C	t	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr16	30558410	30558411	chr16:30558411:T:G	chr16:30558411:T:G	T	G	t	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr16	30658608	30658609	chr16:30658609:G:A	rs189959511	G	A	G	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr16	30806758	30806759	chr16:30806759:T:C	rs1042187488	T	C	T	Hoxd9.mouse_homeodomain_1	7	1	-	8.287463081002919	1.5836371344111884	CCAATAAAA
chr16	31031954	31031955	chr16:31031955:T:C	rs8054046	T	C	T	Hoxd9.mouse_homeodomain_1	4	1	+	7.522691831404475	4.867645186541897	CCCATAAAG
chr16	31386478	31386479	chr16:31386479:A:G	rs9931651	A	G	G	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr16	31453967	31453968	chr16:31453968:G:A	rs576648880	G	A	A	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr16	32474600	32474601	chr16:32474601:G:T	rs74017572	G	T	.	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr16	35685267	35685268	chr16:35685268:G:A	rs8061110	G	A	g	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr16	35694534	35694535	chr16:35694535:A:G	rs11863543	A	G	g	Hoxd9.mouse_homeodomain_1	6	1	+	7.707931958869418	1.0041060122776866	CCAATTAAA
chr16	35694575	35694576	chr16:35694576:T:C	rs74018437	T	C	c	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr16	35728319	35728320	chr16:35728320:T:C	rs7194464	T	C	c	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr16	35992713	35992714	chr16:35992714:G:C	rs562807961	G	C	.	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr16	36334847	36334848	chr16:36334848:T:A	rs1326729553	T	A	.	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr16	46687849	46687850	chr16:46687850:T:C	rs78674672	T	C	T	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr16	48139469	48139470	chr16:48139470:G:A	rs8046826	G	A	G	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr16	48183132	48183133	chr16:48183133:G:T	rs76361012	G	T	G	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr16	48612940	48612941	chr16:48612941:A:T	rs2129243	A	T	T	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr16	48687735	48687736	chr16:48687736:G:A	rs79616748	G	A	G	Hoxd9.mouse_homeodomain_1	2	1	-	7.1462160923678635	0.6587756347442264	GCCATAAAC
chr16	48940754	48940755	chr16:48940755:C:T	rs57997302	C	T	C	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr16	48994155	48994156	chr16:48994156:G:A	rs1861557	G	A	A	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr16	49051737	49051738	chr16:49051738:T:C	rs1420601	T	C	C	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr16	49051738	49051739	chr16:49051739:G:T	rs1420600	G	T	G	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr16	49242177	49242178	chr16:49242178:T:C	rs194418	T	C	C	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr16	49593062	49593063	chr16:49593063:T:C	rs78474057	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.241935125048919	5.907856525186427	CCCATACAA
chr16	49732956	49732957	chr16:49732957:A:G	rs66470159	A	G	A	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr16	49933321	49933322	chr16:49933322:T:C	rs13336863	T	C	T	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr16	50079861	50079862	chr16:50079862:C:T	rs8051216	C	T	c	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr16	50093970	50093971	chr16:50093971:G:T	rs78586086	G	T	G	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr16	50267788	50267789	chr16:50267789:G:A	rs375445104	G	A	G	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr16	50452063	50452064	chr16:50452064:T:C	rs7189496	T	C	T	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr16	50745983	50745984	chr16:50745984:C:T	rs7195766	C	T	T	Hoxd9.mouse_homeodomain_1	0	1	-	7.9772278588234515	7.188342824966311	GCAATAAAA
chr16	50853616	50853617	chr16:50853617:T:C	rs62029920	T	C	T	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr16	50856346	50856347	chr16:50856347:T:C	rs1874499	T	C	T	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr16	50954798	50954799	chr16:50954799:A:C	rs7191472	A	C	A	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr16	50954838	50954839	chr16:50954839:G:A	rs17228232	G	A	G	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr16	50997964	50997965	chr16:50997965:G:A	rs12599586	G	A	g	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr16	51055877	51055878	chr16:51055878:G:A	rs73579833	G	A	A	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr16	51055895	51055896	chr16:51055896:A:G	rs7196034	A	G	G	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr16	51597293	51597294	chr16:51597294:G:C	rs1498765	G	C	g	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr16	51721459	51721460	chr16:51721460:C:T	rs12927956	C	T	C	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr16	51734382	51734383	chr16:51734383:G:A	rs113732894	G	A	G	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr16	51990281	51990282	chr16:51990282:C:T	rs1345324	C	T	T	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr16	52251745	52251746	chr16:52251746:T:C	rs67753568	T	C	C	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr16	52387227	52387228	chr16:52387228:T:A	rs1125832	T	A	T	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr16	52393280	52393281	chr16:52393281:A:C	rs3095596	A	C	A	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr16	52591700	52591701	chr16:52591701:C:A	rs12920540	C	A	C	Hoxd9.mouse_homeodomain_1	0	1	-	7.212456609225008	5.628144526095533	GCCATAAAG
chr16	52646605	52646606	chr16:52646606:G:C	rs3104828	G	C	C	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr16	52709112	52709113	chr16:52709113:C:A	rs4572397	C	A	C	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr16	52777081	52777082	chr16:52777082:A:G	rs8047392	A	G	G	Hoxd9.mouse_homeodomain_1	8	1	+	7.34470511784777	5.878378009362515	GCCGTAAAA
chr16	52785925	52785926	chr16:52785926:A:C	rs6499094	A	C	C	Hoxd9.mouse_homeodomain_1	6	1	+	7.889898683853121	6.1428148690123106	ACCATAAAA
chr16	53034900	53034901	chr16:53034901:C:T	rs56278234	C	T	C	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr16	53373915	53373916	chr16:53373916:G:C	rs76882697	G	C	G	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr16	53378295	53378296	chr16:53378296:G:A	rs2908791	G	A	A	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr16	53529414	53529415	chr16:53529415:T:C	rs73614566	T	C	T	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr16	53611481	53611482	chr16:53611482:T:C	rs2241179	T	C	C	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr16	53745577	53745578	chr16:53745578:T:C	rs73609973	T	C	T	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr16	53756489	53756490	chr16:53756490:C:T	rs1861868	C	T	C	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr16	53773440	53773441	chr16:53773441:G:T	rs75677255	G	T	G	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr16	53775948	53775949	chr16:53775949:A:G	rs73612011	A	G	A	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr16	53971307	53971308	chr16:53971308:A:G	rs144526321	A	G	A	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr16	53975775	53975776	chr16:53975776:G:T	rs4784335	G	T	T	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr16	54035294	54035295	chr16:54035295:C:A	rs856976	C	A	.	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr16	54061952	54061953	chr16:54061953:C:T	rs1558687	C	T	c	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr16	54242363	54242364	chr16:54242364:G:T	rs373144897	G	T	G	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr16	54242374	54242375	chr16:54242375:G:T	rs55710204	G	T	G	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr16	54331199	54331200	chr16:54331200:G:A	rs12149279	G	A	G	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr16	54385799	54385800	chr16:54385800:A:G	rs16953457	A	G	A	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr16	54503966	54503967	chr16:54503967:C:T	rs147233517	C	T	C	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr16	54739617	54739618	chr16:54739618:A:T	rs8046077	A	T	A	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr16	54739640	54739641	chr16:54739641:G:C	rs8044177	G	C	G	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr16	54766048	54766049	chr16:54766049:C:T	rs112694651	C	T	C	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr16	54827424	54827425	chr16:54827425:T:G	rs4377152	T	G	G	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr16	54934044	54934045	chr16:54934045:A:C	rs7190373	A	C	C	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr16	55116521	55116522	chr16:55116522:C:T	rs4784484	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	-	7.212456609225008	6.423571575367866	GCCATAAAG
chr16	55136583	55136584	chr16:55136584:C:T	rs9941331	C	T	C	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr16	55369585	55369586	chr16:55369586:T:G	rs360770	T	G	G	Hoxd9.mouse_homeodomain_1	4	1	+	8.027213970992095	1.1853955236614904	CACATAAAA
chr16	55445774	55445775	chr16:55445775:T:C	rs10521324	T	C	C	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr16	55495380	55495381	chr16:55495381:C:T	rs17859960	C	T	C	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr16	55570215	55570216	chr16:55570216:A:T	rs6499766	A	T	T	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr16	55838367	55838368	chr16:55838368:G:A	rs4286108	G	A	G	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr16	56041317	56041318	chr16:56041318:C:T	rs7196109	C	T	C	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr16	56106684	56106685	chr16:56106685:C:A	rs1510187	C	A	C	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr16	56365254	56365255	chr16:56365255:G:T	rs75309038	G	T	G	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr16	56563570	56563571	chr16:56563571:C:T	rs282233	C	T	C	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr16	56569654	56569655	chr16:56569655:G:T	rs61346935	G	T	G	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr16	56612749	56612750	chr16:56612750:T:C	rs191645374	T	C	T	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr16	56615550	56615551	chr16:56615551:T:C	rs62036053	T	C	T	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr16	56620491	56620492	chr16:56620492:T:A	rs12923959	T	A	T	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr16	56638630	56638631	chr16:56638631:C:A	chr16:56638631:C:A	C	A	.	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr16	56767783	56767784	chr16:56767784:G:A	rs12444584	G	A	G	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr16	56841382	56841383	chr16:56841383:G:A	rs77285911	G	A	G	Hoxd9.mouse_homeodomain_1	1	1	-	8.099252595576761	6.784450681243753	GCCATTAAA
chr16	56841389	56841390	chr16:56841390:C:A	rs113334990	C	A	C	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr16	56851177	56851178	chr16:56851178:C:T	rs62037026	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	-	8.099252595576761	7.3103675617196195	GCCATTAAA
chr16	56871337	56871338	chr16:56871338:C:T	rs1123507	C	T	C	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr16	56917363	56917364	chr16:56917364:A:G	rs28168	A	G	G	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr16	56924888	56924889	chr16:56924889:A:C	rs863706	A	C	A	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr16	56931373	56931374	chr16:56931374:T:A	rs75312411	T	A	T	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr16	56944269	56944270	chr16:56944270:A:G	rs9925326	A	G	A	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr16	57020103	57020104	chr16:57020104:G:T	rs2052880	G	T	g	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr16	57191294	57191295	chr16:57191295:T:C	rs116106888	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.9772278588234515	6.643149258960959	GCAATAAAA
chr16	57596002	57596003	chr16:57596003:G:T	rs12918312	G	T	T	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr16	57596008	57596009	chr16:57596009:A:G	rs187488253	A	G	A	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr16	57642578	57642579	chr16:57642579:G:A	rs79694343	G	A	G	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr16	58219357	58219358	chr16:58219358:C:T	rs139839273	C	T	T	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr16	58351906	58351907	chr16:58351907:G:A	rs17241119	G	A	G	Hoxd9.mouse_homeodomain_1	0	1	-	8.409487817756228	6.514940512447287	CCCATTAAA
chr16	58424540	58424541	chr16:58424541:T:C	rs6499956	T	C	t	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr16	58687192	58687193	chr16:58687193:A:G	rs9745345	A	G	g	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr16	58713921	58713922	chr16:58713922:C:T	rs28497727	C	T	c	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr16	58847992	58847993	chr16:58847993:G:A	rs2306237	G	A	A	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr16	58854766	58854767	chr16:58854767:G:A	rs66506082	G	A	A	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr16	58885742	58885743	chr16:58885743:T:A	rs8056541	T	A	A	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr16	59168530	59168531	chr16:59168531:G:A	rs12444458	G	A	G	Hoxd9.mouse_homeodomain_1	1	1	-	7.9772278588234515	6.662425944490444	GCAATAAAA
chr16	59532241	59532242	chr16:59532242:C:A	rs7203083	C	A	A	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr16	59597637	59597638	chr16:59597638:A:G	rs31983	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.027213970992095	6.693135371129603	CACATAAAA
chr16	59791837	59791838	chr16:59791838:C:T	rs12447274	C	T	C	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr16	59886009	59886010	chr16:59886010:A:G	rs189920910	A	G	A	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr16	60127336	60127337	chr16:60127337:A:G	rs77647173	A	G	A	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr16	60933809	60933810	chr16:60933810:T:A	rs1424275	T	A	T	Hoxd9.mouse_homeodomain_1	4	1	+	7.716978748812629	0.875160301482023	GACATAAAA
chr16	61089904	61089905	chr16:61089905:C:G	rs964197	C	G	G	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr16	61557537	61557538	chr16:61557538:A:G	rs4784125	A	G	G	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr16	62184116	62184117	chr16:62184117:A:T	rs12599468	A	T	T	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr16	62246617	62246618	chr16:62246618:A:G	rs4541092	A	G	A	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr16	62450408	62450409	chr16:62450409:C:T	rs78625630	C	T	C	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr16	62568832	62568833	chr16:62568833:T:A	rs16964846	T	A	T	Hoxd9.mouse_homeodomain_1	1	1	-	8.027213970992095	7.674217025556723	CACATAAAA
chr16	63035694	63035695	chr16:63035695:C:G	rs153342	C	G	G	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr16	63350205	63350206	chr16:63350206:T:C	rs116861887	T	C	T	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr16	63350230	63350231	chr16:63350231:T:C	rs138803496	T	C	T	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr16	63359723	63359724	chr16:63359724:C:T	rs141364981	C	T	C	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr16	64012071	64012072	chr16:64012072:C:T	rs78612054	C	T	C	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr16	64068143	64068144	chr16:64068144:A:T	rs1436422	A	T	A	Hoxd9.mouse_homeodomain_1	5	1	+	8.98901893988973	8.409487817756228	CCCATAAAA
chr16	64160233	64160234	chr16:64160234:G:A	rs59441435	G	A	A	Hoxd9.mouse_homeodomain_1	8	1	-	7.1462160923678635	5.746270592944195	GCCATAAAC
chr16	64381527	64381528	chr16:64381528:G:A	rs7201822	G	A	G	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr16	64391088	64391089	chr16:64391089:C:T	rs72782933	C	T	C	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr16	64416823	64416824	chr16:64416824:A:T	rs143260089	A	T	A	Hoxd9.mouse_homeodomain_1	5	1	+	7.716978748812629	7.137447626679127	GACATAAAA
chr16	64419713	64419714	chr16:64419714:G:T	rs11647520	G	T	G	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr16	64437480	64437481	chr16:64437481:A:G	rs62041635	A	G	A	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr16	64450263	64450264	chr16:64450264:T:C	rs17561653	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.889898683853121	6.555820083990628	ACCATAAAA
chr16	64450284	64450285	chr16:64450285:T:C	rs11645963	T	C	C	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr16	64784925	64784926	chr16:64784926:C:A	rs62039958	C	A	C	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr16	64984545	64984546	chr16:64984546:G:A	rs35203	G	A	C	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr16	65023823	65023824	chr16:65023824:A:C	rs74026228	A	C	a	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr16	65063028	65063029	chr16:65063029:C:T	rs559160183	C	T	c	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr16	65063034	65063035	chr16:65063035:T:C	rs566280784	T	C	T	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr16	65104686	65104687	chr16:65104687:C:A	rs7203623	C	A	A	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr16	65214188	65214189	chr16:65214189:G:A	rs9928050	G	A	G	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr16	65323830	65323831	chr16:65323831:G:C	rs72778833	G	C	g	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr16	65343710	65343711	chr16:65343711:G:C	rs12597631	G	C	C	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr16	65489695	65489696	chr16:65489696:A:G	rs6499002	A	G	G	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr16	65667934	65667935	chr16:65667935:T:A	rs8057020	T	A	A	Hoxd9.mouse_homeodomain_1	6	1	-	8.409487817756228	5.520072047725641	CCCATTAAA
chr16	65744781	65744782	chr16:65744782:T:C	rs4785849	T	C	T	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr16	65867765	65867766	chr16:65867766:C:G	rs74023501	C	G	C	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr16	66127444	66127445	chr16:66127445:A:G	rs255207	A	G	G	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr16	66228147	66228148	chr16:66228148:G:A	rs235118	G	A	G	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr16	66275364	66275365	chr16:66275365:A:C	rs57211179	A	C	C	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr16	66337748	66337749	chr16:66337749:G:A	rs146494819	G	A	G	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr16	66406238	66406239	chr16:66406239:G:C	rs7199714	G	C	C	Hoxd9.mouse_homeodomain_1	2	1	-	7.889898683853121	4.421907026400791	ACCATAAAA
chr16	66413760	66413761	chr16:66413761:G:A	rs10852433	G	A	A	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr16	66551867	66551868	chr16:66551868:C:A	chr16:66551868:C:A	C	A	C	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr16	66906248	66906249	chr16:66906249:G:C	rs142429806	G	C	G	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr16	67473266	67473267	chr16:67473267:C:A	rs145296374	C	A	C	Hoxd9.mouse_homeodomain_1	1	1	+	6.931699902869452	5.969894933971817	GCCATACAA
chr16	67665830	67665831	chr16:67665831:C:T	rs7185559	C	T	C	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr16	68041992	68041993	chr16:68041993:C:G	rs80256426	C	G	C	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr16	68265852	68265853	chr16:68265853:T:C	rs145343884	T	C	T	Hoxd9.mouse_homeodomain_1	7	1	-	7.9772278588234515	1.2734019122317202	GCAATAAAA
chr16	68265867	68265868	chr16:68265868:G:A	rs12596500	G	A	G	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr16	68265877	68265878	chr16:68265878:T:C	rs12924125	T	C	T	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr16	68265879	68265880	chr16:68265880:C:T	rs8053109	C	T	C	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr16	68421727	68421728	chr16:68421728:C:A	rs1562480	C	A	A	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr16	68738001	68738002	chr16:68738002:A:C	rs12932357	A	C	C	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr16	68823385	68823386	chr16:68823386:T:C	rs2276330	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.9772278588234515	6.643149258960959	GCAATAAAA
chr16	68941137	68941138	chr16:68941138:T:C	rs144688388	T	C	T	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr16	69130203	69130204	chr16:69130204:A:T	rs72789240	A	T	A	Hoxd9.mouse_homeodomain_1	3	1	+	7.707931958869418	5.704450822060773	CCAATTAAA
chr16	69167027	69167028	chr16:69167028:A:T	rs12931566	A	T	A	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr16	69173082	69173083	chr16:69173083:C:T	rs117187204	C	T	C	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr16	69173094	69173095	chr16:69173095:G:T	rs115118188	G	T	G	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr16	69201459	69201460	chr16:69201460:C:T	rs11644226	C	T	C	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr16	69727144	69727145	chr16:69727145:G:A	rs111555725	G	A	G	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr16	69800923	69800924	chr16:69800924:G:A	rs1008550490	G	A	g	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr16	69805327	69805328	chr16:69805328:G:A	rs56000913	G	A	G	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr16	69867980	69867981	chr16:69867981:T:C	rs1500337	T	C	C	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr16	69909938	69909939	chr16:69909939:T:G	rs572608396	T	G	T	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr16	70157850	70157851	chr16:70157851:A:G	rs12448476	A	G	a	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr16	70630169	70630170	chr16:70630170:C:G	rs34234103	C	G	C	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr16	70713465	70713466	chr16:70713466:G:A	rs79489174	G	A	G	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr16	70801320	70801321	chr16:70801321:A:G	rs57723102	A	G	A	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr16	70801330	70801331	chr16:70801331:A:G	rs187886360	A	G	A	Hoxd9.mouse_homeodomain_1	4	1	-	8.409487817756228	5.7544411728936495	CCCATTAAA
chr16	71634730	71634731	chr16:71634731:T:G	rs12932850	T	G	T	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr16	71809476	71809477	chr16:71809477:T:C	rs144905764	T	C	T	Hoxd9.mouse_homeodomain_1	0	1	-	7.889898683853121	8.678783717710262	ACCATAAAA
chr16	71870387	71870388	chr16:71870388:T:C	rs2335713	T	C	C	Hoxd9.mouse_homeodomain_1	6	1	-	7.091711387329735	0.38788544073800313	CCCATCAAA
chr16	71959738	71959739	chr16:71959739:A:G	rs4788585	A	G	G	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr16	72095845	72095846	chr16:72095846:T:C	rs12924413	T	C	C	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr16	72763945	72763946	chr16:72763946:C:A	rs138769235	C	A	A	Hoxd9.mouse_homeodomain_1	2	1	+	7.889898683853121	7.188342824966311	ACCATAAAA
chr16	72769534	72769535	chr16:72769535:A:C	rs76967471	A	C	C	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr16	72833081	72833082	chr16:72833082:A:G	rs147882602	A	G	A	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr16	72833085	72833086	chr16:72833086:T:G	chr16:72833086:T:G	T	G	T	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr16	72878252	72878253	chr16:72878253:C:T	rs75919816	C	T	C	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr16	72939454	72939455	chr16:72939455:C:T	rs76547147	C	T	C	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr16	73027497	73027498	chr16:73027498:T:G	rs12597694	T	G	T	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr16	73148096	73148097	chr16:73148097:G:A	rs7192296	G	A	G	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr16	73171770	73171771	chr16:73171771:T:A	rs9921088	T	A	T	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr16	73322337	73322338	chr16:73322338:G:A	rs4888572	G	A	G	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr16	73408395	73408396	chr16:73408396:A:G	rs33946915	A	G	A	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr16	73455133	73455134	chr16:73455134:C:A	rs12925165	C	A	C	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr16	73814294	73814295	chr16:73814295:G:C	rs62044562	G	C	G	Hoxd9.mouse_homeodomain_1	0	1	+	7.212456609225008	7.522691831404475	GCCATAAAG
chr16	73991363	73991364	chr16:73991364:C:T	rs7199140	C	T	T	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr16	74032356	74032357	chr16:74032357:G:A	rs117870561	G	A	G	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr16	74165687	74165688	chr16:74165688:A:G	rs9938838	A	G	A	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr16	74165713	74165714	chr16:74165714:A:C	rs117905454	A	C	A	Hoxd9.mouse_homeodomain_1	6	1	+	8.678783717710262	6.931699902869452	GCCATAAAA
chr16	74533489	74533490	chr16:74533490:C:T	rs1971071	C	T	C	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr16	74616967	74616968	chr16:74616968:T:C	rs75364315	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.212456609225008	5.878378009362515	GCCATAAAG
chr16	74664991	74664992	chr16:74664992:T:C	rs117325386	T	C	T	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr16	74801315	74801316	chr16:74801316:T:C	rs2113274	T	C	T	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr16	74867929	74867930	chr16:74867930:A:C	rs8045860	A	C	A	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr16	74869902	74869903	chr16:74869903:A:G	rs74026604	A	G	A	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr16	75090879	75090880	chr16:75090880:G:A	rs147882572	G	A	G	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr16	75093112	75093113	chr16:75093113:G:A	rs58355832	G	A	G	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr16	75211104	75211105	chr16:75211105:G:T	rs9921586	G	T	g	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr16	75221318	75221319	chr16:75221319:A:G	rs8051363	A	G	a	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr16	75292872	75292873	chr16:75292873:C:T	rs75031911	C	T	C	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr16	75402332	75402333	chr16:75402333:A:T	rs4888409	A	T	T	Hoxd9.mouse_homeodomain_1	4	1	-	7.707931958869418	0.8661135115388111	CCAATTAAA
chr16	75455036	75455037	chr16:75455037:C:T	rs4887829	C	T	C	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr16	75472086	75472087	chr16:75472087:A:G	rs182301740	A	G	A	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr16	75472099	75472100	chr16:75472100:C:T	chr16:75472100:C:T	C	T	C	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr16	75501897	75501898	chr16:75501898:A:C	rs117609408	A	C	A	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr16	75556495	75556496	chr16:75556496:A:G	rs141310983	A	G	A	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr16	75637160	75637161	chr16:75637161:T:C	rs11866252	T	C	T	Hoxd9.mouse_homeodomain_1	4	1	+	8.027213970992095	5.372167326129518	CACATAAAA
chr16	76081198	76081199	chr16:76081199:C:T	rs62050493	C	T	T	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr16	76341110	76341111	chr16:76341111:C:G	rs9319495	C	G	C	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr16	76377578	76377579	chr16:76377579:T:C	rs17766975	T	C	T	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr16	76377681	76377682	chr16:76377682:A:G	rs9931521	A	G	A	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr16	76446166	76446167	chr16:76446167:C:G	rs17679369	C	G	C	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr16	76531629	76531630	chr16:76531630:C:T	rs116575143	C	T	C	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr16	76791573	76791574	chr16:76791574:T:C	rs56046613	T	C	t	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr16	76900638	76900639	chr16:76900639:C:T	rs4887886	C	T	T	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr16	76928333	76928334	chr16:76928334:T:C	rs3736334	T	C	T	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr16	77054999	77055000	chr16:77055000:C:G	rs12448956	C	G	C	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr16	77055007	77055008	chr16:77055008:T:A	rs12446824	T	A	A	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr16	77063210	77063211	chr16:77063211:T:C	rs28528265	T	C	T	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr16	77063230	77063231	chr16:77063231:A:C	rs17701089	A	C	A	Hoxd9.mouse_homeodomain_1	6	1	+	7.889898683853121	6.1428148690123106	ACCATAAAA
chr16	77106486	77106487	chr16:77106487:T:A	rs7188571	T	A	T	Hoxd9.mouse_homeodomain_1	4	1	+	7.1462160923678635	0.30439764503725675	GCCATAAAC
chr16	77115184	77115185	chr16:77115185:G:C	rs6564389	G	C	C	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr16	77171720	77171721	chr16:77171721:G:A	rs6564398	G	A	A	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr16	77171742	77171743	chr16:77171743:A:G	rs74497356	A	G	A	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr16	77387438	77387439	chr16:77387439:G:C	rs17620748	G	C	G	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr16	77501984	77501985	chr16:77501985:C:T	rs8056964	C	T	T	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr16	77589451	77589452	chr16:77589452:C:T	rs9806874	C	T	C	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr16	77589455	77589456	chr16:77589456:C:A	rs9806875	C	A	C	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr16	77807104	77807105	chr16:77807105:A:G	rs4514690	A	G	G	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr16	77807132	77807133	chr16:77807133:A:C	rs16946521	A	C	A	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr16	77840251	77840252	chr16:77840252:C:G	rs1075355	C	G	C	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr16	78143498	78143499	chr16:78143499:G:A	rs145313316	G	A	A	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr16	78199751	78199752	chr16:78199752:G:T	rs79569006	G	T	G	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr16	78258674	78258675	chr16:78258675:G:A	rs9938459	G	A	G	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr16	78276702	78276703	chr16:78276703:T:C	rs4536491	T	C	T	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr16	78292456	78292457	chr16:78292457:C:G	rs11150054	C	G	C	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr16	78342450	78342451	chr16:78342451:T:C	rs77264347	T	C	T	Hoxd9.mouse_homeodomain_1	8	1	-	8.98901893988973	7.522691831404475	CCCATAAAA
chr16	78362099	78362100	chr16:78362100:C:G	rs11642404	C	G	C	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr16	78384090	78384091	chr16:78384091:T:C	rs12598242	T	C	T	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr16	78452223	78452224	chr16:78452224:T:A	rs11150080	T	A	A	Hoxd9.mouse_homeodomain_1	4	1	+	7.674217025556723	0.8323985782261166	CTCATAAAA
chr16	78488715	78488716	chr16:78488716:T:C	rs2738706	T	C	C	Hoxd9.mouse_homeodomain_1	5	1	-	7.522691831404475	1.1485021131579192	CCCATAAAG
chr16	78624684	78624685	chr16:78624685:T:G	rs72805028	T	G	T	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr16	78708841	78708842	chr16:78708842:C:T	rs7206203	C	T	C	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr16	78718167	78718168	chr16:78718168:C:G	rs72799088	C	G	A	Hoxd9.mouse_homeodomain_1	0	1	-	8.678783717710262	8.98901893988973	GCCATAAAA
chr16	78786673	78786674	chr16:78786674:G:C	rs4887988	G	C	C	Hoxd9.mouse_homeodomain_1	3	1	+	7.654940340027237	2.4135108356862487	CCCGTAAAA
chr16	78788495	78788496	chr16:78788496:C:T	rs12598809	C	T	C	Hoxd9.mouse_homeodomain_1	1	1	+	8.98901893988973	7.674217025556723	CCCATAAAA
chr16	78823063	78823064	chr16:78823064:T:A	rs7197765	T	A	A	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr16	79008876	79008877	chr16:79008877:G:T	rs889745	G	T	T	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr16	79018556	79018557	chr16:79018557:C:G	rs9932373	C	G	C	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr16	79049224	79049225	chr16:79049225:G:A	rs60349708	G	A	G	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr16	79054065	79054066	chr16:79054066:C:T	rs72795627	C	T	C	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr16	79062519	79062520	chr16:79062520:G:C	rs9922235	G	C	G	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr16	79078116	79078117	chr16:79078117:G:C	rs12925253	G	C	G	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr16	79090189	79090190	chr16:79090190:C:T	rs35074985	C	T	C	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr16	79123318	79123319	chr16:79123319:G:A	rs8044667	G	A	G	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr16	79149009	79149010	chr16:79149010:A:G	rs12050933	A	G	A	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr16	79155555	79155556	chr16:79155556:C:G	rs11859414	C	G	G	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr16	79164831	79164832	chr16:79164832:C:G	rs16949745	C	G	C	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr16	79164851	79164852	chr16:79164852:T:C	chr16:79164852:T:C	T	C	T	Hoxd9.mouse_homeodomain_1	1	1	+	7.674217025556723	8.98901893988973	CTCATAAAA
chr16	79381605	79381606	chr16:79381606:C:T	rs11859844	C	T	C	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr16	79571582	79571583	chr16:79571583:C:T	rs440271	C	T	C	Hoxd9.mouse_homeodomain_1	2	1	+	8.98901893988973	2.5015784822660927	CCCATAAAA
chr16	79668743	79668744	chr16:79668744:G:A	rs4888043	G	A	G	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr16	79703558	79703559	chr16:79703559:C:G	rs12920791	C	G	C	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr16	79703562	79703563	chr16:79703563:T:C	rs12596775	T	C	T	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr16	79753044	79753045	chr16:79753045:C:T	rs8053230	C	T	T	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr16	79772991	79772992	chr16:79772992:G:T	rs8057344	G	T	G	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr16	79985770	79985771	chr16:79985771:T:A	rs190361668	T	A	T	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr16	79987914	79987915	chr16:79987915:A:G	rs62042303	A	G	G	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr16	79998206	79998207	chr16:79998207:C:A	rs11645885	C	A	A	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr16	80063610	80063611	chr16:80063611:A:G	rs76658169	A	G	A	Hoxd9.mouse_homeodomain_1	5	1	-	8.409487817756228	7.091711387329735	CCCATTAAA
chr16	80080961	80080962	chr16:80080962:G:A	rs8046908	G	A	G	Hoxd9.mouse_homeodomain_1	1	1	-	8.409487817756228	7.094685903423221	CCCATTAAA
chr16	80147518	80147519	chr16:80147519:C:T	rs80338555	C	T	C	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr16	80184994	80184995	chr16:80184995:C:G	rs61540470	C	G	G	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr16	80285315	80285316	chr16:80285316:T:C	rs2348640	T	C	T	Hoxd9.mouse_homeodomain_1	8	1	-	8.678783717710262	7.212456609225008	GCCATAAAA
chr16	80300935	80300936	chr16:80300936:A:C	rs11150268	A	C	C	Hoxd9.mouse_homeodomain_1	7	1	+	8.027213970992095	5.137798200961511	CACATAAAA
chr16	80381992	80381993	chr16:80381993:G:T	rs1484032	G	T	G	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr16	80463703	80463704	chr16:80463704:C:A	rs4581712	C	A	A	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr16	80512599	80512600	chr16:80512600:A:G	rs34423425	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.98901893988973	7.654940340027237	CCCATAAAA
chr16	80650268	80650269	chr16:80650269:T:C	rs10871391	T	C	T	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr16	80664207	80664208	chr16:80664208:T:A	rs6564778	T	A	T	Hoxd9.mouse_homeodomain_1	4	1	+	7.45645131454733	0.614632867216724	CCCATAAAC
chr16	80705774	80705775	chr16:80705775:T:C	rs77917754	T	C	T	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr16	80708459	80708460	chr16:80708460:G:A	rs899955320	G	A	G	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr16	80732300	80732301	chr16:80732301:T:C	rs11644231	T	C	T	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr16	80805080	80805081	chr16:80805081:A:G	rs72820985	A	G	A	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr16	80883312	80883313	chr16:80883313:C:G	rs9932601	C	G	C	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr16	80887182	80887183	chr16:80887183:C:A	rs2549743	C	A	A	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr16	80924544	80924545	chr16:80924545:C:A	rs4888116	C	A	A	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr16	80924580	80924581	chr16:80924581:T:C	rs148726268	T	C	T	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr16	80998044	80998045	chr16:80998045:T:G	rs2549865	T	G	T	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr16	81008322	81008323	chr16:81008323:G:A	rs3759935	G	A	G	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr16	81008344	81008345	chr16:81008345:G:A	rs3759934	G	A	A	Hoxd9.mouse_homeodomain_1	2	1	-	7.075409217893736	0.5879687602700975	CCCGTTAAA
chr16	81072149	81072150	chr16:81072150:G:A	rs112904811	G	A	G	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr16	81261281	81261282	chr16:81261282:A:G	rs74029097	A	G	A	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr16	81261287	81261288	chr16:81261288:T:C	rs6564863	T	C	C	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr16	81287917	81287918	chr16:81287918:T:G	rs72833344	T	G	T	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr16	81311340	81311341	chr16:81311341:T:C	rs12924233	T	C	C	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr16	81381455	81381456	chr16:81381456:A:T	rs1345896	A	T	A	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr16	81440947	81440948	chr16:81440948:A:C	rs72835187	A	C	A	Hoxd9.mouse_homeodomain_1	8	1	+	8.027213970992095	6.494646345649697	CACATAAAA
chr16	81496992	81496993	chr16:81496993:A:G	rs7192108	A	G	A	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr16	81568145	81568146	chr16:81568146:G:C	rs2530	G	C	G	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr16	81627224	81627225	chr16:81627225:A:G	rs7190420	A	G	A	Hoxd9.mouse_homeodomain_1	4	1	-	8.027213970992095	5.372167326129518	CACATAAAA
chr16	81627245	81627246	chr16:81627246:T:C	rs28366926	T	C	T	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr16	81782974	81782975	chr16:81782975:C:G	rs6564919	C	G	G	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr16	81897000	81897001	chr16:81897001:G:T	rs72820823	G	T	G	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr16	81942286	81942287	chr16:81942287:A:C	rs11862662	A	C	A	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr16	82005088	82005089	chr16:82005089:A:G	rs187869070	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	7.707931958869418	6.373853359006924	CCAATTAAA
chr16	82089096	82089097	chr16:82089097:A:T	rs60567424	A	T	A	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr16	82135929	82135930	chr16:82135930:C:G	rs9940821	C	G	G	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr16	82250949	82250950	chr16:82250950:T:C	rs117207651	T	C	T	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr16	82545791	82545792	chr16:82545792:A:T	rs34632482	A	T	T	Hoxd9.mouse_homeodomain_1	5	1	+	8.287463081002919	7.707931958869418	CCAATAAAA
chr16	82580527	82580528	chr16:82580528:G:A	rs117667414	G	A	G	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr16	82603722	82603723	chr16:82603723:C:A	rs3865182	C	A	C	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr16	82638559	82638560	chr16:82638560:G:T	rs4782722	G	T	G	Hoxd9.mouse_homeodomain_1	1	1	-	7.889898683853121	6.928093714955487	ACCATAAAA
chr16	82638721	82638722	chr16:82638722:C:T	rs12922394	C	T	c	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr16	82654462	82654463	chr16:82654463:T:G	rs150085830	T	G	T	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr16	82655272	82655273	chr16:82655273:G:C	rs79606833	G	C	G	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr16	82670476	82670477	chr16:82670477:A:G	rs10451170	A	G	G	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr16	82693812	82693813	chr16:82693813:C:T	rs9930490	C	T	C	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr16	82701787	82701788	chr16:82701788:G:A	rs757381757	G	A	A	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr16	82736058	82736059	chr16:82736059:C:T	rs16958387	C	T	C	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr16	82745268	82745269	chr16:82745269:G:A	rs76679521	G	A	G	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr16	82793321	82793322	chr16:82793322:A:C	rs4783275	A	C	T	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr16	83021141	83021142	chr16:83021142:A:G	rs72794177	A	G	A	Hoxd9.mouse_homeodomain_1	4	1	-	6.943160709270972	4.288114064408394	CCCATTAAG
chr16	83182292	83182293	chr16:83182293:C:G	rs111444195	C	G	C	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr16	83187579	83187580	chr16:83187580:T:C	rs9921224	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.091711387329735	5.757632787467242	CCCATCAAA
chr16	83365466	83365467	chr16:83365467:G:C	rs9923619	G	C	C	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr16	83365495	83365496	chr16:83365496:A:T	rs75620104	A	T	A	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr16	83644324	83644325	chr16:83644325:G:A	rs66480519	G	A	G	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr16	83645217	83645218	chr16:83645218:A:G	rs8061113	A	G	A	Hoxd9.mouse_homeodomain_1	6	1	+	8.678783717710262	1.9749577711185315	GCCATAAAA
chr16	83656048	83656049	chr16:83656049:G:A	rs72628280	G	A	A	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr16	83706030	83706031	chr16:83706031:C:G	rs7200109	C	G	C	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr16	83733723	83733724	chr16:83733724:T:C	rs402010	T	C	C	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr16	83915900	83915901	chr16:83915901:T:C	rs1127382	T	C	C	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr16	84004762	84004763	chr16:84004763:T:A	rs8047640	T	A	T	Hoxd9.mouse_homeodomain_1	5	1	+	6.943160709270972	7.522691831404475	CCCATTAAG
chr16	84011131	84011132	chr16:84011132:A:G	rs111696687	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	7.1462160923678635	5.81213749250537	GCCATAAAC
chr16	84039132	84039133	chr16:84039133:C:G	rs11149618	C	G	G	Hoxd9.mouse_homeodomain_1	8	1	+	7.1462160923678635	7.212456609225008	GCCATAAAC
chr16	84039447	84039448	chr16:84039448:G:A	rs4782879	G	A	G	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr16	84064378	84064379	chr16:84064379:T:A	rs7185134	T	A	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.091711387329735	5.08823025052109	CCCATCAAA
chr16	84086209	84086210	chr16:84086210:G:C	rs7200337	G	C	G	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr16	84332504	84332505	chr16:84332505:G:T	rs4782922	G	T	T	Hoxd9.mouse_homeodomain_1	2	1	-	8.027213970992095	7.325658112105286	CACATAAAA
chr16	84332526	84332527	chr16:84332527:G:A	rs244822	G	A	G	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr16	84407826	84407827	chr16:84407827:C:T	rs187239504	C	T	.	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr16	84483253	84483254	chr16:84483254:C:T	rs149963715	C	T	C	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr16	84499538	84499539	chr16:84499539:A:C	rs12923106	A	C	A	Hoxd9.mouse_homeodomain_1	6	1	+	8.027213970992095	6.2801301561512854	CACATAAAA
chr16	84500168	84500169	chr16:84500169:G:A	rs34101172	G	A	G	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr16	84514980	84514981	chr16:84514981:A:C	rs143529187	A	C	A	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr16	84544467	84544468	chr16:84544468:G:A	rs12598273	G	A	G	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr16	84550214	84550215	chr16:84550215:T:C	rs8052738	T	C	T	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr16	84550218	84550219	chr16:84550219:C:G	rs8051563	C	G	C	Hoxd9.mouse_homeodomain_1	2	1	+	8.98901893988973	5.5210272824374	CCCATAAAA
chr16	84592197	84592198	chr16:84592198:T:C	rs17826353	T	C	T	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr16	84607981	84607982	chr16:84607982:G:C	rs140978574	G	C	G	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr16	84608976	84608977	chr16:84608977:A:G	rs2925050	A	G	A	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr16	84609910	84609911	chr16:84609911:T:C	rs6420383	T	C	T	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr16	84616720	84616721	chr16:84616721:C:A	rs182053556	C	A	C	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr16	84664189	84664190	chr16:84664190:C:T	rs3803624	C	T	C	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr16	84689315	84689316	chr16:84689316:G:A	rs114366208	G	A	A	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr16	84737084	84737085	chr16:84737085:G:A	rs12933228	G	A	G	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr16	84737306	84737307	chr16:84737307:T:A	rs12934432	T	A	T	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr16	84857917	84857918	chr16:84857918:G:A	rs2087992	G	A	G	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr16	85000618	85000619	chr16:85000619:C:G	rs56074626	C	G	C	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr16	85086370	85086371	chr16:85086371:T:C	rs3942895	T	C	C	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr16	85295400	85295401	chr16:85295401:G:A	rs34413765	G	A	G	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr16	85305652	85305653	chr16:85305653:T:C	rs12935623	T	C	T	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr16	85375428	85375429	chr16:85375429:G:A	rs1385038	G	A	G	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr16	85517424	85517425	chr16:85517425:C:T	rs75749994	C	T	C	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr16	85578253	85578254	chr16:85578254:A:G	rs12103157	A	G	A	Hoxd9.mouse_homeodomain_1	4	1	-	8.678783717710262	6.023737072847684	GCCATAAAA
chr16	85578254	85578255	chr16:85578255:T:G	rs75179080	T	G	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.678783717710262	2.1032756135067814	GCCATAAAA
chr16	85689997	85689998	chr16:85689998:G:A	rs183381764	G	A	G	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr16	85729536	85729537	chr16:85729537:C:A	rs371980	C	A	C	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr16	85733402	85733403	chr16:85733403:G:C	rs569983182	G	C	G	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr16	85894957	85894958	chr16:85894958:A:G	rs60241040	A	G	.	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr16	85905148	85905149	chr16:85905149:A:G	rs9926664	A	G	G	Hoxd9.mouse_homeodomain_1	6	1	+	6.943160709270972	0.2393347626792411	CCCATTAAG
chr16	85909114	85909115	chr16:85909115:A:G	rs11545564	A	G	A	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr16	85989775	85989776	chr16:85989776:A:G	rs7184087	A	G	A	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr16	85997586	85997587	chr16:85997587:G:A	rs11117434	G	A	A	Hoxd9.mouse_homeodomain_1	0	1	+	7.1462160923678635	6.357331058510722	GCCATAAAC
chr16	86000199	86000200	chr16:86000200:T:C	rs74032552	T	C	T	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr16	86000203	86000204	chr16:86000204:A:G	rs7196849	A	G	A	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr16	86016144	86016145	chr16:86016145:T:C	rs2176774	T	C	C	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr16	86016163	86016164	chr16:86016164:A:G	rs41406450	A	G	G	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr16	86027651	86027652	chr16:86027652:C:T	rs114239137	C	T	C	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr16	86042222	86042223	chr16:86042223:T:C	rs16940325	T	C	T	Hoxd9.mouse_homeodomain_1	7	1	-	7.1462160923678635	0.44239014577613167	GCCATAAAC
chr16	86086923	86086924	chr16:86086924:G:A	rs58744742	G	A	G	Hoxd9.mouse_homeodomain_1	2	1	-	7.654940340027237	1.1674998824035994	CCCGTAAAA
chr16	86138567	86138568	chr16:86138568:T:A	rs543820028	T	A	T	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr16	86307741	86307742	chr16:86307742:G:C	rs1567431	G	C	G	Hoxd9.mouse_homeodomain_1	0	1	-	7.241935125048919	6.931699902869452	CCCATACAA
chr16	86370214	86370215	chr16:86370215:G:C	rs12918140	G	C	G	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr16	86383639	86383640	chr16:86383640:A:G	rs58863524	A	G	A	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr16	86383655	86383656	chr16:86383656:A:G	rs1728387	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	7.707931958869418	6.373853359006924	CCAATTAAA
chr16	86396333	86396334	chr16:86396334:G:C	rs12448971	G	C	G	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr16	86446559	86446560	chr16:86446560:A:G	rs1360998582	A	G	A	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr16	86514757	86514758	chr16:86514758:C:A	rs72818129	C	A	C	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr16	86525384	86525385	chr16:86525385:G:A	rs878524	G	A	a	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr16	86594776	86594777	chr16:86594777:C:A	rs16941577	C	A	C	Hoxd9.mouse_homeodomain_1	1	1	+	8.409487817756228	7.447682848858594	CCCATTAAA
chr16	86651714	86651715	chr16:86651715:A:C	rs80248195	A	C	A	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr16	86692503	86692504	chr16:86692504:A:G	rs9889093	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.287463081002919	6.953384481140425	CCAATAAAA
chr16	86692714	86692715	chr16:86692715:C:T	rs114724374	C	T	C	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr16	86737528	86737529	chr16:86737529:T:C	rs17215382	T	C	T	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr16	86737537	86737538	chr16:86737538:C:G	rs75228497	C	G	C	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr16	86790820	86790821	chr16:86790821:A:G	rs6539978	A	G	G	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr16	86854609	86854610	chr16:86854610:A:G	rs148939001	A	G	A	Hoxd9.mouse_homeodomain_1	8	1	+	8.287463081002919	6.821135972517665	CCAATAAAA
chr16	86854615	86854616	chr16:86854616:C:G	rs74036642	C	G	C	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr16	86886742	86886743	chr16:86886743:A:T	rs77838875	A	T	A	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr16	86911609	86911610	chr16:86911610:C:T	rs74036696	C	T	T	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr16	86915312	86915313	chr16:86915313:C:A	rs80179290	C	A	C	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr16	86925269	86925270	chr16:86925270:C:T	rs6539984	C	T	T	Hoxd9.mouse_homeodomain_1	1	1	+	8.678783717710262	7.363981803377255	GCCATAAAA
chr16	86967146	86967147	chr16:86967147:A:G	rs7196400	A	G	G	Hoxd9.mouse_homeodomain_1	5	1	+	7.241935125048919	0.867745406802363	CCCATACAA
chr16	87020830	87020831	chr16:87020831:C:A	rs17290774	C	A	C	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr16	87031741	87031742	chr16:87031742:C:A	rs75848718	C	A	C	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr16	87036601	87036602	chr16:87036602:C:A	rs3901357	C	A	C	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr16	87067845	87067846	chr16:87067846:T:A	rs17770146	T	A	T	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr16	87189008	87189009	chr16:87189009:C:A	rs56172204	C	A	A	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr16	87201041	87201042	chr16:87201042:T:G	rs72802122	T	G	G	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr16	87255035	87255036	chr16:87255036:T:C	rs6540023	T	C	C	Hoxd9.mouse_homeodomain_1	4	1	+	6.931699902869452	4.276653258006873	GCCATACAA
chr16	87278782	87278783	chr16:87278783:A:G	chr16:87278783:A:G	A	G	A	Hoxd9.mouse_homeodomain_1	7	1	+	7.1462160923678635	0.44239014577613167	GCCATAAAC
chr16	87278795	87278796	chr16:87278796:A:G	rs145351993	A	G	A	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr16	87301425	87301426	chr16:87301426:A:G	rs12934444	A	G	G	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr16	87491130	87491131	chr16:87491131:T:C	chr16:87491131:T:C	T	C	T	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr16	87529305	87529306	chr16:87529306:C:T	rs3860279	C	T	T	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr16	87541977	87541978	chr16:87541978:C:T	rs118085373	C	T	C	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr16	87649902	87649903	chr16:87649903:G:C	rs1991507	G	C	G	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr16	87655509	87655510	chr16:87655510:C:T	rs12598044	C	T	C	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr16	87670867	87670868	chr16:87670868:C:G	rs62053822	C	G	G	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr16	87723677	87723678	chr16:87723678:G:A	chr16:87723678:G:A	G	A	G	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr16	87723677	87723678	chr16:87723678:G:C	rs4843682	G	C	G	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr16	87765125	87765126	chr16:87765126:G:C	rs4843266	G	C	C	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr16	87853649	87853650	chr16:87853650:T:C	rs149397812	T	C	T	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr16	87945313	87945314	chr16:87945314:A:C	rs140204385	A	C	A	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr16	87964637	87964638	chr16:87964638:C:T	rs7201218	C	T	t	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr16	87983760	87983761	chr16:87983761:T:C	rs3815817	T	C	c	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr16	88012015	88012016	chr16:88012016:G:C	rs74040258	G	C	g	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr16	88019274	88019275	chr16:88019275:C:T	rs566026375	C	T	c	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr16	88164671	88164672	chr16:88164672:G:A	rs6540190	G	A	-	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr16	88307311	88307312	chr16:88307312:C:T	rs8050917	C	T	C	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr16	88307312	88307313	chr16:88307313:G:A	rs112828826	G	A	G	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr16	88307314	88307315	chr16:88307315:T:C	rs6603048	T	C	T	Hoxd9.mouse_homeodomain_1	8	1	-	8.027213970992095	6.560886862506841	CACATAAAA
chr16	88351319	88351320	chr16:88351320:T:C	rs79192035	T	C	N	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr16	88402931	88402932	chr16:88402932:G:T	rs2333921	G	T	t	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr16	88402972	88402973	chr16:88402973:G:A	rs2333920	G	A	G	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr16	88503683	88503684	chr16:88503684:T:C	rs12446134	T	C	C	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr16	88662104	88662105	chr16:88662105:A:G	rs12933657	A	G	A	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr16	88709583	88709584	chr16:88709584:T:G	rs73262644	T	G	T	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr16	88760929	88760930	chr16:88760930:G:A	rs112028717	G	A	G	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr16	88783345	88783346	chr16:88783346:G:A	rs76327864	G	A	G	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr16	88929028	88929029	chr16:88929029:T:C	rs539636	T	C	T	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr16	88929071	88929072	chr16:88929072:G:A	rs491224	G	A	A	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr16	89072029	89072030	chr16:89072030:G:A	rs72817404	G	A	G	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr16	89083184	89083185	chr16:89083185:C:T	rs8057674	C	T	T	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr16	89088611	89088612	chr16:89088612:A:G	rs28729715	A	G	G	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr16	89097290	89097291	chr16:89097291:G:A	rs113813057	G	A	G	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr16	89111579	89111580	chr16:89111580:G:A	rs117435455	G	A	G	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr16	89162228	89162229	chr16:89162229:G:A	rs145430616	G	A	G	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr16	89390941	89390942	chr16:89390942:C:A	rs2965827	C	A	A	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr16	89684959	89684960	chr16:89684960:C:T	rs62067112	C	T	C	Hoxd9.mouse_homeodomain_1	2	1	+	7.1462160923678635	0.6587756347442264	GCCATAAAC
chr16	89867011	89867012	chr16:89867012:A:G	rs62056097	A	G	-	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr16	89947234	89947235	chr16:89947235:T:C	rs11641286	T	C	C	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr17	241620	241621	chr17:241621:A:G	rs147085763	A	G	A	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr17	253258	253259	chr17:253259:C:G	rs78195572	C	G	C	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr17	289253	289254	chr17:289254:C:T	rs12601068	C	T	C	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr17	366971	366972	chr17:366972:C:T	rs4366776	C	T	C	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr17	412533	412534	chr17:412534:T:G	rs142052294	T	G	T	Hoxd9.mouse_homeodomain_1	7	1	-	8.027213970992095	5.137798200961511	CACATAAAA
chr17	887636	887637	chr17:887637:T:C	rs374840758	T	C	T	Hoxd9.mouse_homeodomain_1	4	1	+	7.707931958869418	5.052885314006839	CCAATTAAA
chr17	901670	901671	chr17:901671:C:T	rs62070161	C	T	C	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr17	904318	904319	chr17:904319:A:G	rs617081	A	G	T	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr17	909250	909251	chr17:909251:T:C	rs9328723	T	C	T	Hoxd9.mouse_homeodomain_1	1	1	+	7.674217025556723	8.98901893988973	CTCATAAAA
chr17	911079	911080	chr17:911080:T:C	rs7209796	T	C	T	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr17	929126	929127	chr17:929127:T:A	rs4968135	T	A	A	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr17	1043086	1043087	chr17:1043087:G:A	rs2259905	G	A	G	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr17	1082627	1082628	chr17:1082628:G:T	rs2165858	G	T	T	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr17	1083204	1083205	chr17:1083205:G:T	rs12936317	G	T	G	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr17	1300081	1300082	chr17:1300082:G:A	rs79967867	G	A	G	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr17	1306573	1306574	chr17:1306574:T:C	rs11650110	T	C	t	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr17	1453284	1453285	chr17:1453285:C:A	rs16946807	C	A	A	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr17	1796787	1796788	chr17:1796788:T:C	rs5005394	T	C	C	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr17	1859194	1859195	chr17:1859195:C:G	rs4790835	C	G	N	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr17	2014315	2014316	chr17:2014316:A:G	rs4239070	A	G	G	Hoxd9.mouse_homeodomain_1	3	1	+	8.027213970992095	6.693135371129603	CACATAAAA
chr17	2069111	2069112	chr17:2069112:A:G	rs57548838	A	G	A	Hoxd9.mouse_homeodomain_1	5	1	+	7.9772278588234515	1.603038140576896	GCAATAAAA
chr17	2121305	2121306	chr17:2121306:A:G	rs2760738	A	G	A	Hoxd9.mouse_homeodomain_1	2	1	+	7.9772278588234515	5.2107920602579325	GCAATAAAA
chr17	2273237	2273238	chr17:2273238:A:G	rs11869805	A	G	G	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr17	2893350	2893351	chr17:2893351:T:C	rs4790101	T	C	T	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr17	2966080	2966081	chr17:2966081:G:A	rs7342939	G	A	G	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr17	2966084	2966085	chr17:2966085:C:T	rs142795368	C	T	C	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr17	2972355	2972356	chr17:2972356:A:G	rs4547368	A	G	G	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr17	3009060	3009061	chr17:3009061:T:C	rs75841461	T	C	T	Hoxd9.mouse_homeodomain_1	5	1	-	7.522691831404475	1.1485021131579192	CCCATAAAG
chr17	3051022	3051023	chr17:3051023:C:T	rs11078436	C	T	C	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr17	3580126	3580127	chr17:3580127:C:T	rs57716901	C	T	C	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr17	3911736	3911737	chr17:3911737:T:C	rs11078474	T	C	T	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr17	3961405	3961406	chr17:3961406:C:G	rs57545477	C	G	G	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr17	4066232	4066233	chr17:4066233:T:A	rs9892466	T	A	T	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr17	4134854	4134855	chr17:4134855:G:A	rs965515	G	A	G	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr17	4134880	4134881	chr17:4134881:A:C	rs118135015	A	C	A	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr17	4136473	4136474	chr17:4136474:C:T	rs767990630	C	T	C	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr17	4144481	4144482	chr17:4144482:A:G	chr17:4144482:A:G	A	G	A	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr17	4252833	4252834	chr17:4252834:T:A	rs8074058	T	A	T	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr17	4252864	4252865	chr17:4252865:G:A	rs8068429	G	A	G	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr17	4295354	4295355	chr17:4295355:A:G	rs4508454	A	G	A	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr17	4394063	4394064	chr17:4394064:T:C	rs115888129	T	C	T	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr17	4441073	4441074	chr17:4441074:T:C	rs146844813	T	C	T	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr17	4596466	4596467	chr17:4596467:G:T	rs12602726	G	T	G	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr17	4655944	4655945	chr17:4655945:G:T	rs111970705	G	T	G	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr17	4660555	4660556	chr17:4660556:A:C	rs181586478	A	C	A	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr17	4967992	4967993	chr17:4967993:T:C	rs117836374	T	C	T	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr17	5225186	5225187	chr17:5225187:A:G	rs2585269	A	G	G	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr17	5413878	5413879	chr17:5413879:T:C	rs72839514	T	C	T	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr17	5614446	5614447	chr17:5614447:A:G	rs2670657	A	G	G	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr17	5781635	5781636	chr17:5781636:A:T	rs66856130	A	T	T	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr17	5781664	5781665	chr17:5781665:A:G	rs62058284	A	G	A	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr17	5853596	5853597	chr17:5853597:A:C	rs8065299	A	C	A	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr17	5855261	5855262	chr17:5855262:A:G	rs888324	A	G	G	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr17	5877079	5877080	chr17:5877080:C:T	rs4985642	C	T	C	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr17	6154841	6154842	chr17:6154842:T:C	rs7216836	T	C	C	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr17	6261480	6261481	chr17:6261481:A:G	rs2309555	A	G	G	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr17	6276021	6276022	chr17:6276022:A:G	rs936731	A	G	a	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr17	6345854	6345855	chr17:6345855:G:A	rs12936953	G	A	G	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr17	6345876	6345877	chr17:6345877:C:T	rs9905787	C	T	T	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr17	6476526	6476527	chr17:6476527:T:A	rs12949954	T	A	A	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr17	6749676	6749677	chr17:6749677:A:G	rs1567347	A	G	A	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr17	6842556	6842557	chr17:6842557:T:C	rs9911691	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.027213970992095	6.693135371129603	CACATAAAA
chr17	6842557	6842558	chr17:6842558:G:A	rs11652116	G	A	G	Hoxd9.mouse_homeodomain_1	2	1	-	8.027213970992095	1.5397735133684596	CACATAAAA
chr17	6904877	6904878	chr17:6904878:A:G	rs558503	A	G	G	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr17	7136275	7136276	chr17:7136276:C:G	rs7215074	C	G	C	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr17	7213995	7213996	chr17:7213996:T:C	rs73976746	T	C	T	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr17	7214009	7214010	chr17:7214010:C:T	rs527288168	C	T	C	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr17	7214026	7214027	chr17:7214027:T:A	rs1306672300	T	A	T	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr17	7219242	7219243	chr17:7219243:G:A	rs73976748	G	A	G	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr17	7340340	7340341	chr17:7340341:T:C	rs4796406	T	C	T	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr17	7856031	7856032	chr17:7856032:C:G	rs532394652	C	G	C	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr17	7936110	7936111	chr17:7936111:C:T	rs537171562	C	T	C	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr17	7997194	7997195	chr17:7997195:G:A	rs186416341	G	A	G	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr17	8053771	8053772	chr17:8053772:C:T	rs9896119	C	T	T	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr17	8063726	8063727	chr17:8063727:C:T	rs8069254	C	T	T	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr17	8125588	8125589	chr17:8125589:G:C	rs561205471	G	C	G	Hoxd9.mouse_homeodomain_1	2	1	-	7.212456609225008	3.7444649517726774	GCCATAAAG
chr17	8125600	8125601	chr17:8125601:G:A	rs1050137454	G	A	G	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr17	8125609	8125610	chr17:8125610:C:T	chr17:8125610:C:T	C	T	C	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr17	8153560	8153561	chr17:8153561:G:A	rs941672921	G	A	G	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr17	8226323	8226324	chr17:8226324:G:A	rs145845338	G	A	G	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr17	8226324	8226325	chr17:8226325:T:G	rs752115178	T	G	T	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr17	8226326	8226327	chr17:8226327:C:T	rs540866407	C	T	C	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr17	8226335	8226336	chr17:8226336:C:T	rs3027252	C	T	C	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr17	8459262	8459263	chr17:8459263:A:G	rs8077982	A	G	A	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr17	8810815	8810816	chr17:8810816:T:A	rs195768	T	A	A	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr17	8962038	8962039	chr17:8962039:G:A	rs146209234	G	A	G	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr17	8975490	8975491	chr17:8975491:C:T	rs11659030	C	T	C	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr17	9056362	9056363	chr17:9056363:C:T	rs4063993	C	T	C	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr17	9062233	9062234	chr17:9062234:G:A	rs8081823	G	A	A	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr17	9113850	9113851	chr17:9113851:G:A	rs28456271	G	A	G	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr17	9115951	9115952	chr17:9115952:G:A	rs2872616	G	A	G	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr17	9217403	9217404	chr17:9217404:T:G	rs1490634401	T	G	T	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr17	9346792	9346793	chr17:9346793:A:G	rs59987625	A	G	G	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr17	9365184	9365185	chr17:9365185:T:C	rs4239104	T	C	T	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr17	9544512	9544513	chr17:9544513:A:C	rs4791349	A	C	a	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr17	9771583	9771584	chr17:9771584:C:T	rs114469918	C	T	C	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr17	9771604	9771605	chr17:9771605:A:G	rs11654889	A	G	G	Hoxd9.mouse_homeodomain_1	5	1	+	7.1462160923678635	0.7720263741213071	GCCATAAAC
chr17	9818161	9818162	chr17:9818162:T:A	rs8071852	T	A	A	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr17	9843043	9843044	chr17:9843044:G:A	rs7210206	G	A	G	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr17	9868943	9868944	chr17:9868944:A:G	rs17743050	A	G	A	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr17	9930255	9930256	chr17:9930256:A:C	rs6503273	A	C	A	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr17	10078004	10078005	chr17:10078005:T:C	rs12452692	T	C	c	Hoxd9.mouse_homeodomain_1	5	1	-	8.027213970992095	1.6530242527455408	CACATAAAA
chr17	10078014	10078015	chr17:10078015:T:C	rs12452693	T	C	t	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr17	10122697	10122698	chr17:10122698:C:T	rs75356104	C	T	C	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr17	10166627	10166628	chr17:10166628:C:T	rs11651122	C	T	C	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr17	10171641	10171642	chr17:10171642:C:T	rs72810926	C	T	C	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr17	10182976	10182977	chr17:10182977:C:T	rs12452869	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	+	7.091711387329735	5.197164082020794	CCCATCAAA
chr17	10218392	10218393	chr17:10218393:C:T	rs59389304	C	T	C	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr17	10429609	10429610	chr17:10429610:G:T	rs62058113	G	T	G	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr17	10673478	10673479	chr17:10673479:C:T	rs192135714	C	T	C	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr17	10707798	10707799	chr17:10707799:A:T	rs430491	A	T	T	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr17	10797007	10797008	chr17:10797008:T:C	rs11078864	T	C	T	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr17	10920738	10920739	chr17:10920739:A:G	rs73277316	A	G	A	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr17	10956684	10956685	chr17:10956685:A:C	rs56066751	A	C	A	Hoxd9.mouse_homeodomain_1	7	1	+	7.674217025556723	4.784801255526136	CTCATAAAA
chr17	11002063	11002064	chr17:11002064:C:T	rs2321322	C	T	C	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr17	11004458	11004459	chr17:11004459:A:C	rs62060872	A	C	A	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr17	11250237	11250238	chr17:11250238:G:A	rs9889283	G	A	G	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr17	11429477	11429478	chr17:11429478:C:G	rs2908954	C	G	C	Hoxd9.mouse_homeodomain_1	0	1	+	8.409487817756228	8.099252595576761	CCCATTAAA
chr17	11564485	11564486	chr17:11564486:T:C	rs72809085	T	C	T	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr17	11592421	11592422	chr17:11592422:G:A	rs60405162	G	A	G	Hoxd9.mouse_homeodomain_1	8	1	+	6.943160709270972	8.409487817756228	CCCATTAAG
chr17	11671276	11671277	chr17:11671277:G:A	chr17:11671277:G:A	G	A	G	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr17	11742911	11742912	chr17:11742912:T:C	rs9906083	T	C	T	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr17	11758383	11758384	chr17:11758384:T:G	rs11078031	T	G	T	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr17	11816465	11816466	chr17:11816466:A:G	rs717786	A	G	A	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr17	11832822	11832823	chr17:11832823:G:A	rs11869944	G	A	G	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr17	11987103	11987104	chr17:11987104:C:T	rs79698436	C	T	C	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr17	11987110	11987111	chr17:11987111:A:G	rs78446426	A	G	A	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr17	11987112	11987113	chr17:11987113:G:A	rs1348421943	G	A	G	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr17	12020249	12020250	chr17:12020250:C:G	rs2190853	C	G	C	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr17	12391598	12391599	chr17:12391599:A:C	rs2529714	A	C	A	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr17	12664878	12664879	chr17:12664879:A:C	rs115760313	A	C	A	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr17	12717579	12717580	chr17:12717580:G:A	rs12602716	G	A	G	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr17	12753679	12753680	chr17:12753680:G:C	rs57172332	G	C	G	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr17	12849960	12849961	chr17:12849961:G:A	rs9916516	G	A	G	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr17	12936662	12936663	chr17:12936663:G:A	rs7222788	G	A	A	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr17	12965156	12965157	chr17:12965157:G:C	rs79382181	G	C	C	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr17	13001677	13001678	chr17:13001678:T:G	rs56317483	T	G	T	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr17	13001807	13001808	chr17:13001808:T:C	rs56338821	T	C	T	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr17	13001821	13001822	chr17:13001822:G:A	rs56266951	G	A	A	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr17	13031857	13031858	chr17:13031858:A:G	rs116024324	A	G	A	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr17	13113018	13113019	chr17:13113019:T:C	rs17641637	T	C	T	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr17	13288344	13288345	chr17:13288345:G:A	rs56304380	G	A	G	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr17	13473975	13473976	chr17:13473976:G:A	rs11078160	G	A	G	Hoxd9.mouse_homeodomain_1	0	1	+	7.716978748812629	6.928093714955487	GACATAAAA
chr17	13480841	13480842	chr17:13480842:C:T	rs4450440	C	T	T	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr17	13480870	13480871	chr17:13480871:C:A	rs72637304	C	A	C	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr17	13541227	13541228	chr17:13541228:T:C	rs978609570	T	C	T	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr17	13541238	13541239	chr17:13541239:A:G	rs11650867	A	G	A	Hoxd9.mouse_homeodomain_1	7	1	+	7.212456609225008	0.5086306626332764	GCCATAAAG
chr17	13598429	13598430	chr17:13598430:C:T	rs561600083	C	T	C	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr17	13621668	13621669	chr17:13621669:A:T	rs1013123	A	T	T	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr17	13621683	13621684	chr17:13621684:A:C	rs1013124	A	C	A	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr17	13869434	13869435	chr17:13869435:T:C	rs7220601	T	C	C	Hoxd9.mouse_homeodomain_1	2	1	-	7.707931958869418	4.941496160303898	CCAATTAAA
chr17	13888283	13888284	chr17:13888284:T:A	rs8065468	T	A	A	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr17	13940968	13940969	chr17:13940969:A:G	chr17:13940969:A:G	A	G	A	Hoxd9.mouse_homeodomain_1	5	1	+	7.674217025556723	1.3000273073101671	CTCATAAAA
chr17	14093079	14093080	chr17:14093080:A:G	rs17609880	A	G	A	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr17	14506090	14506091	chr17:14506091:G:A	rs549494	G	A	G	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr17	14593017	14593018	chr17:14593018:C:T	rs76858161	C	T	C	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr17	14681692	14681693	chr17:14681693:G:A	rs7226014	G	A	A	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr17	14815008	14815009	chr17:14815009:G:A	rs4792547	G	A	G	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr17	14904106	14904107	chr17:14904107:T:C	rs117386636	T	C	T	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr17	14922180	14922181	chr17:14922181:T:A	rs2215298	T	A	T	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr17	15135572	15135573	chr17:15135573:G:C	rs11652470	G	C	g	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr17	15377714	15377715	chr17:15377715:T:A	rs113035304	T	A	T	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr17	15453416	15453417	chr17:15453417:T:C	rs3803841	T	C	T	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr17	15902010	15902011	chr17:15902011:C:T	rs573295123	C	T	C	Hoxd9.mouse_homeodomain_1	2	1	+	8.409487817756228	1.922047360132591	CCCATTAAA
chr17	16247154	16247155	chr17:16247155:G:T	rs1010124045	G	T	G	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr17	16468037	16468038	chr17:16468038:G:T	rs16959738	G	T	G	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr17	16468042	16468043	chr17:16468043:G:A	rs11655230	G	A	G	Hoxd9.mouse_homeodomain_1	3	1	+	7.654940340027237	8.98901893988973	CCCGTAAAA
chr17	16477304	16477305	chr17:16477305:C:T	rs139116115	C	T	c	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr17	16486157	16486158	chr17:16486158:G:A	rs78139010	G	A	G	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr17	16715891	16715892	chr17:16715892:T:C	rs148939820	T	C	.	Hoxd9.mouse_homeodomain_1	3	1	-	7.707931958869418	6.373853359006924	CCAATTAAA
chr17	16948027	16948028	chr17:16948028:C:T	rs11656532	C	T	T	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr17	17043676	17043677	chr17:17043677:C:G	rs73277607	C	G	.	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr17	17071687	17071688	chr17:17071688:T:G	rs73979060	T	G	T	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr17	17081104	17081105	chr17:17081105:A:G	rs4264448	A	G	A	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr17	17237531	17237532	chr17:17237532:C:T	rs78622866	C	T	C	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr17	17376457	17376458	chr17:17376458:C:A	rs539694727	C	A	C	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr17	17381753	17381754	chr17:17381754:G:T	rs9909266	G	T	T	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr17	17491146	17491147	chr17:17491147:A:G	rs532935650	A	G	A	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr17	17577159	17577160	chr17:17577160:T:C	rs8070432	T	C	T	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr17	17683068	17683069	chr17:17683069:C:A	rs116522256	C	A	C	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr17	17774269	17774270	chr17:17774270:G:A	rs182371341	G	A	G	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr17	17792199	17792200	chr17:17792200:G:C	rs757757035	G	C	G	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr17	17922836	17922837	chr17:17922837:G:T	chr17:17922837:G:T	G	T	g	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr17	17970845	17970846	chr17:17970846:C:G	rs112501212	C	G	C	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr17	18995223	18995224	chr17:18995224:A:G	rs28896808	A	G	A	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr17	19005446	19005447	chr17:19005447:G:A	rs73982610	G	A	G	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr17	19377371	19377372	chr17:19377372:G:C	rs75234643	G	C	G	Hoxd9.mouse_homeodomain_1	2	1	-	7.889898683853121	4.421907026400791	ACCATAAAA
chr17	19499207	19499208	chr17:19499208:T:C	rs2010015	T	C	C	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr17	19725693	19725694	chr17:19725694:C:T	rs144165227	C	T	T	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr17	20083547	20083548	chr17:20083548:T:A	rs4925079	T	A	T	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr17	20095175	20095176	chr17:20095176:C:T	rs73981808	C	T	C	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr17	20096095	20096096	chr17:20096096:G:A	rs888423	G	A	G	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr17	20120781	20120782	chr17:20120782:A:G	rs17759959	A	G	A	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr17	20226232	20226233	chr17:20226233:A:G	rs12051550	A	G	A	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr17	20284650	20284651	chr17:20284651:C:T	rs147098222	C	T	.	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr17	20699699	20699700	chr17:20699700:T:C	chr17:20699700:T:C	T	C	.	Hoxd9.mouse_homeodomain_1	3	1	-	7.707931958869418	6.373853359006924	CCAATTAAA
chr17	20784410	20784411	chr17:20784411:A:G	rs9891975	A	G	a	Hoxd9.mouse_homeodomain_1	3	1	+	8.287463081002919	6.953384481140425	CCAATAAAA
chr17	20920496	20920497	chr17:20920497:T:A	rs4452013	T	A	.	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr17	21025640	21025641	chr17:21025641:A:C	rs1115509	A	C	C	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr17	21039283	21039284	chr17:21039284:T:C	rs537160981	T	C	T	Hoxd9.mouse_homeodomain_1	5	1	-	8.678783717710262	2.304593999463707	GCCATAAAA
chr17	21041235	21041236	chr17:21041236:T:C	rs62058993	T	C	T	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr17	21308564	21308565	chr17:21308565:C:T	rs77000546	C	T	c	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr17	21478832	21478833	chr17:21478833:G:A	rs61023219	G	A	G	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr17	21479771	21479772	chr17:21479772:G:A	rs9914708	G	A	G	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr17	21479779	21479780	chr17:21479780:C:T	rs35679439	C	T	C	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr17	21599988	21599989	chr17:21599989:G:A	rs11204367	G	A	g	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr17	21666612	21666613	chr17:21666613:A:G	rs1452441604	A	G	.	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr17	22154602	22154603	chr17:22154603:A:G	rs374668015	A	G	.	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr17	22279061	22279062	chr17:22279062:C:T	rs142108158	C	T	.	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr17	22654772	22654773	chr17:22654773:T:C	rs12941092	T	C	c	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr17	25010844	25010845	chr17:25010845:G:T	rs1448225324	G	T	.	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr17	25668152	25668153	chr17:25668153:G:C	rs1319145756	G	C	.	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr17	25864310	25864311	chr17:25864311:C:G	chr17:25864311:C:G	C	G	.	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr17	26607285	26607286	chr17:26607286:A:G	rs1425643680	A	G	.	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr17	26607298	26607299	chr17:26607299:G:A	rs1292141720	G	A	.	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr17	26774478	26774479	chr17:26774479:G:A	rs1339538684	G	A	N	Hoxd9.mouse_homeodomain_1	2	1	-	8.678783717710262	2.1913432600866263	GCCATAAAA
chr17	26885609	26885610	chr17:26885610:T:C	rs1300291126	T	C	N	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr17	26885620	26885621	chr17:26885621:T:G	rs1363918014	T	G	N	Hoxd9.mouse_homeodomain_1	1	1	-	8.027213970992095	8.98901893988973	CACATAAAA
chr17	27309876	27309877	chr17:27309877:G:A	rs72845638	G	A	G	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr17	27309877	27309878	chr17:27309878:A:G	rs6505198	A	G	G	Hoxd9.mouse_homeodomain_1	0	1	+	7.889898683853121	8.678783717710262	ACCATAAAA
chr17	27569640	27569641	chr17:27569641:G:A	rs80338342	G	A	G	Hoxd9.mouse_homeodomain_1	3	1	+	7.654940340027237	8.98901893988973	CCCGTAAAA
chr17	27574031	27574032	chr17:27574032:A:G	rs34684247	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.409487817756228	7.075409217893736	CCCATTAAA
chr17	27695204	27695205	chr17:27695205:G:T	rs73261364	G	T	G	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr17	27794000	27794001	chr17:27794001:C:A	rs531702176	C	A	C	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr17	28326275	28326276	chr17:28326276:G:A	rs188189867	G	A	G	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr17	28532891	28532892	chr17:28532892:T:C	rs683289	T	C	T	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr17	28751532	28751533	chr17:28751533:A:C	rs562111667	A	C	A	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr17	28752536	28752537	chr17:28752537:C:T	rs34693224	C	T	C	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr17	28987205	28987206	chr17:28987206:A:G	rs12451955	A	G	.	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr17	29046037	29046038	chr17:29046038:C:G	rs112560129	C	G	C	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr17	29122947	29122948	chr17:29122948:G:A	rs73988918	G	A	G	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr17	29122957	29122958	chr17:29122958:T:C	rs882729	T	C	C	Hoxd9.mouse_homeodomain_1	4	1	+	6.931699902869452	4.276653258006873	GCCATACAA
chr17	29233707	29233708	chr17:29233708:A:G	rs8081159	A	G	G	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr17	29240798	29240799	chr17:29240799:C:T	rs7226022	C	T	C	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr17	29709331	29709332	chr17:29709332:C:T	rs3115092	C	T	c	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr17	29733387	29733388	chr17:29733388:A:G	rs1006954661	A	G	A	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr17	30113408	30113409	chr17:30113409:G:C	rs28522960	G	C	G	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr17	30130970	30130971	chr17:30130971:A:G	rs4427857	A	G	G	Hoxd9.mouse_homeodomain_1	4	1	-	7.212456609225008	4.557409964362429	GCCATAAAG
chr17	30273607	30273608	chr17:30273608:C:A	rs16965661	C	A	A	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr17	30299284	30299285	chr17:30299285:C:G	rs13341611	C	G	G	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr17	30537891	30537892	chr17:30537892:T:C	rs216473	T	C	t	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr17	30860478	30860479	chr17:30860479:A:G	rs9896095	A	G	G	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr17	30957195	30957196	chr17:30957196:T:C	rs1876432	T	C	C	Hoxd9.mouse_homeodomain_1	4	1	+	7.522691831404475	4.867645186541897	CCCATAAAG
chr17	30961176	30961177	chr17:30961177:G:A	rs8066682	G	A	A	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr17	31071279	31071280	chr17:31071280:G:C	rs72811685	G	C	G	Hoxd9.mouse_homeodomain_1	0	1	+	7.1462160923678635	7.45645131454733	GCCATAAAC
chr17	31096048	31096049	chr17:31096049:A:C	rs17882689	A	C	A	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr17	31537796	31537797	chr17:31537797:C:A	rs75629221	C	A	C	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr17	31740407	31740408	chr17:31740408:T:G	rs9914500	T	G	T	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr17	31744747	31744748	chr17:31744748:T:G	rs58143895	T	G	T	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr17	31755189	31755190	chr17:31755190:C:G	rs11651546	C	G	C	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr17	31790285	31790286	chr17:31790286:A:G	rs9898619	A	G	G	Hoxd9.mouse_homeodomain_1	5	1	-	7.075409217893736	5.757632787467242	CCCGTTAAA
chr17	31794741	31794742	chr17:31794742:C:T	rs11080170	C	T	C	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr17	31824984	31824985	chr17:31824985:G:C	chr17:31824985:G:C	G	C	G	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr17	32015716	32015717	chr17:32015717:T:G	rs1045810005	T	G	.	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr17	32117185	32117186	chr17:32117186:C:G	rs972093093	C	G	C	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr17	32117365	32117366	chr17:32117366:C:A	rs56378319	C	A	C	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr17	32123973	32123974	chr17:32123974:G:C	rs116689123	G	C	G	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr17	32141890	32141891	chr17:32141891:A:C	rs1008406070	A	C	A	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr17	32242916	32242917	chr17:32242917:G:A	rs4795682	G	A	A	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr17	32311302	32311303	chr17:32311303:G:A	rs116409826	G	A	G	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr17	32557009	32557010	chr17:32557010:A:G	rs225183	A	G	G	Hoxd9.mouse_homeodomain_1	8	1	+	7.707931958869418	6.241604850384163	CCAATTAAA
chr17	32623403	32623404	chr17:32623404:T:C	rs192076523	T	C	T	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr17	32804086	32804087	chr17:32804087:T:C	rs73283719	T	C	T	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr17	32863844	32863845	chr17:32863845:T:C	rs2470217	T	C	C	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr17	32944250	32944251	chr17:32944251:A:G	rs3025287	A	G	A	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr17	32962960	32962961	chr17:32962961:A:G	rs28911	A	G	G	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr17	33164080	33164081	chr17:33164081:C:A	rs113193792	C	A	C	Hoxd9.mouse_homeodomain_1	1	1	+	7.212456609225008	6.250651640327374	GCCATAAAG
chr17	33260888	33260889	chr17:33260889:G:A	rs880305	G	A	G	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr17	33401715	33401716	chr17:33401716:G:A	rs9898140	G	A	G	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr17	33422148	33422149	chr17:33422149:T:C	rs77098170	T	C	T	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr17	33422167	33422168	chr17:33422168:T:C	rs35578035	T	C	C	Hoxd9.mouse_homeodomain_1	3	1	-	8.099252595576761	6.765173995714267	GCCATTAAA
chr17	33427596	33427597	chr17:33427597:T:C	rs4795783	T	C	C	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr17	33530068	33530069	chr17:33530069:C:T	rs17191701	C	T	C	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr17	33548383	33548384	chr17:33548384:G:A	rs12939460	G	A	G	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr17	33674708	33674709	chr17:33674709:C:A	rs543752781	C	A	C	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr17	33709931	33709932	chr17:33709932:T:A	rs12940538	T	A	A	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr17	33737194	33737195	chr17:33737195:A:G	rs12453703	A	G	A	Hoxd9.mouse_homeodomain_1	4	1	-	8.98901893988973	6.333972295027152	CCCATAAAA
chr17	33773348	33773349	chr17:33773349:A:C	rs4261592	A	C	C	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr17	33812661	33812662	chr17:33812662:G:T	rs73986745	G	T	G	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr17	33866680	33866681	chr17:33866681:C:T	rs17783671	C	T	T	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr17	33887081	33887082	chr17:33887082:C:A	rs317375	C	A	C	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr17	34010751	34010752	chr17:34010752:C:G	rs72822905	C	G	C	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr17	34275945	34275946	chr17:34275946:C:T	rs6505403	C	T	T	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr17	34304244	34304245	chr17:34304245:G:A	rs34133811	G	A	G	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr17	34312107	34312108	chr17:34312108:A:G	rs1233652	A	G	A	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr17	34312435	34312436	chr17:34312436:A:G	rs3848465	A	G	G	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr17	34322717	34322718	chr17:34322718:T:C	rs11575057	T	C	T	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr17	34327830	34327831	chr17:34327831:G:A	rs1897351	G	A	g	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr17	34455871	34455872	chr17:34455872:A:G	rs62062335	A	G	A	Hoxd9.mouse_homeodomain_1	8	1	+	8.409487817756228	6.943160709270972	CCCATTAAA
chr17	34904526	34904527	chr17:34904527:G:A	rs34305587	G	A	G	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr17	34956660	34956661	chr17:34956661:T:C	rs12150439	T	C	T	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr17	35063149	35063150	chr17:35063150:G:C	rs12453568	G	C	G	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr17	35244883	35244884	chr17:35244884:A:G	rs9901184	A	G	A	Hoxd9.mouse_homeodomain_1	5	1	+	7.889898683853121	1.5157089656065659	ACCATAAAA
chr17	35372752	35372753	chr17:35372753:C:T	rs8078071	C	T	C	Hoxd9.mouse_homeodomain_1	8	1	+	7.45645131454733	6.056505815123662	CCCATAAAC
chr17	35554611	35554612	chr17:35554612:T:C	rs321612	T	C	C	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr17	35555700	35555701	chr17:35555701:C:T	rs321616	C	T	C	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr17	35630759	35630760	chr17:35630760:C:T	chr17:35630760:C:T	C	T	C	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr17	36002364	36002365	chr17:36002365:A:T	rs7209448	A	T	A	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr17	36116417	36116418	chr17:36116418:G:A	rs4796154	G	A	A	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr17	36116436	36116437	chr17:36116437:A:G	rs7217416	A	G	A	Hoxd9.mouse_homeodomain_1	4	1	-	7.241935125048919	4.5868884801863405	CCCATACAA
chr17	36202019	36202020	chr17:36202020:T:C	rs368902459	T	C	.	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr17	36548974	36548975	chr17:36548975:A:G	rs1044894580	A	G	A	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr17	36701593	36701594	chr17:36701594:T:C	chr17:36701594:T:C	T	C	T	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr17	36766071	36766072	chr17:36766072:T:C	rs1391008	T	C	C	Hoxd9.mouse_homeodomain_1	7	1	-	7.091711387329735	0.38788544073800313	CCCATCAAA
chr17	36776392	36776393	chr17:36776393:A:G	rs11263795	A	G	A	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr17	36787411	36787412	chr17:36787412:A:G	rs1497200	A	G	A	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr17	36825143	36825144	chr17:36825144:A:T	rs55671083	A	T	T	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr17	36826887	36826888	chr17:36826888:C:G	rs11650628	C	G	G	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr17	36857259	36857260	chr17:36857260:C:A	rs9889432	C	A	a	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr17	37132436	37132437	chr17:37132437:C:T	rs7219671	C	T	C	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr17	37311234	37311235	chr17:37311235:G:C	rs77379367	G	C	G	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr17	37523482	37523483	chr17:37523483:G:C	rs7207076	G	C	G	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr17	37546815	37546816	chr17:37546816:T:C	rs3110621	T	C	A	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr17	37642930	37642931	chr17:37642931:C:G	rs115367099	C	G	C	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr17	37677537	37677538	chr17:37677538:G:A	rs3094519	G	A	G	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr17	37774640	37774641	chr17:37774641:C:T	rs11651721	C	T	C	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr17	37791711	37791712	chr17:37791712:A:G	rs77031984	A	G	A	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr17	37885616	37885617	chr17:37885617:A:G	rs116864658	A	G	A	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr17	38277521	38277522	chr17:38277522:C:G	rs549786368	C	G	-	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr17	38361945	38361946	chr17:38361946:G:A	rs4795269	G	A	G	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr17	38506693	38506694	chr17:38506694:C:G	rs9915471	C	G	G	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr17	38703258	38703259	chr17:38703259:C:A	chr17:38703259:C:A	C	A	C	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr17	38703264	38703265	chr17:38703265:C:G	chr17:38703265:C:G	C	G	C	Hoxd9.mouse_homeodomain_1	2	1	+	7.45645131454733	3.988459657095	CCCATAAAC
chr17	38903880	38903881	chr17:38903881:T:C	rs1982815	T	C	C	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr17	38903905	38903906	chr17:38903906:C:G	rs114007178	C	G	C	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr17	38903922	38903923	chr17:38903923:G:C	rs7225722	G	C	G	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr17	38959144	38959145	chr17:38959145:C:A	rs62075217	C	A	C	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr17	39067474	39067475	chr17:39067475:G:C	rs14325	G	C	C	Hoxd9.mouse_homeodomain_1	2	1	-	7.716978748812629	4.248987091360299	GACATAAAA
chr17	39632689	39632690	chr17:39632690:C:T	rs967798776	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	-	7.9772278588234515	7.188342824966311	GCAATAAAA
chr17	39712461	39712462	chr17:39712462:C:T	rs4252627	C	T	C	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr17	39801378	39801379	chr17:39801379:C:T	rs34988504	C	T	T	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr17	39980706	39980707	chr17:39980707:C:T	rs181975897	C	T	C	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr17	40023238	40023239	chr17:40023239:A:G	rs2302777	A	G	G	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr17	40697803	40697804	chr17:40697804:C:T	rs78115646	C	T	C	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr17	40791691	40791692	chr17:40791692:C:G	rs2315277	C	G	C	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr17	40849737	40849738	chr17:40849738:C:T	rs9303297	C	T	C	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr17	40885056	40885057	chr17:40885057:G:A	rs17567558	G	A	G	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr17	40936673	40936674	chr17:40936674:A:G	rs536781892	A	G	A	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr17	41052924	41052925	chr17:41052925:C:T	rs2665126	C	T	C	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr17	41061126	41061127	chr17:41061127:T:G	rs349777	T	G	G	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr17	41107138	41107139	chr17:41107139:G:A	rs4247139	G	A	g	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr17	41602067	41602068	chr17:41602068:T:C	rs927711759	T	C	T	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr17	41602788	41602789	chr17:41602789:C:T	chr17:41602789:C:T	C	T	C	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr17	41676676	41676677	chr17:41676677:G:C	rs73297998	G	C	C	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr17	41827909	41827910	chr17:41827910:T:C	rs7215297	T	C	C	Hoxd9.mouse_homeodomain_1	4	1	+	7.522691831404475	4.867645186541897	CCCATAAAG
chr17	42313597	42313598	chr17:42313598:T:C	rs1053023	T	C	C	Hoxd9.mouse_homeodomain_1	3	1	-	8.409487817756228	7.075409217893736	CCCATTAAA
chr17	42390482	42390483	chr17:42390483:G:A	rs17405722	G	A	G	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr17	42402898	42402899	chr17:42402899:G:C	rs11546699	G	C	G	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr17	42457762	42457763	chr17:42457763:A:G	rs16967794	A	G	g	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr17	42459628	42459629	chr17:42459629:C:T	rs144494501	C	T	c	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr17	42459644	42459645	chr17:42459645:A:G	rs188917003	A	G	a	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr17	42528915	42528916	chr17:42528916:G:A	rs4793163	G	A	G	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr17	43002199	43002200	chr17:43002200:A:G	rs1567832	A	G	A	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr17	43021587	43021588	chr17:43021588:G:A	rs573540989	G	A	G	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr17	43021612	43021613	chr17:43021613:G:T	rs1348555927	G	T	-	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr17	43021624	43021625	chr17:43021625:T:G	rs955902637	T	G	T	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr17	43058378	43058379	chr17:43058379:A:C	rs8176279	A	C	A	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr17	43125621	43125622	chr17:43125622:C:A	rs963681962	C	A	C	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr17	43127280	43127281	chr17:43127281:A:G	rs4793204	A	G	G	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr17	43398574	43398575	chr17:43398575:T:C	rs1871338	T	C	a	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr17	43528808	43528809	chr17:43528809:G:T	rs112942514	G	T	G	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr17	43595823	43595824	chr17:43595824:A:C	rs113414401	A	C	A	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr17	43668178	43668179	chr17:43668179:T:G	chr17:43668179:T:G	T	G	T	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr17	43843284	43843285	chr17:43843285:C:T	rs56176358	C	T	C	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr17	43935557	43935558	chr17:43935558:C:T	rs1731893	C	T	C	Hoxd9.mouse_homeodomain_1	2	1	+	8.98901893988973	2.5015784822660927	CCCATAAAA
chr17	43945869	43945870	chr17:43945870:C:A	rs57318579	C	A	C	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr17	44233850	44233851	chr17:44233851:G:T	rs55805524	G	T	G	Hoxd9.mouse_homeodomain_1	0	1	-	7.707931958869418	6.608811702832808	CCAATTAAA
chr17	44581141	44581142	chr17:44581142:A:G	rs72824792	A	G	A	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr17	44619941	44619942	chr17:44619942:A:G	rs36121689	A	G	a	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr17	44782119	44782120	chr17:44782120:C:G	rs12949838	C	G	C	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr17	44898745	44898746	chr17:44898746:C:T	rs8068761	C	T	T	Hoxd9.mouse_homeodomain_1	0	1	-	7.9772278588234515	7.188342824966311	GCAATAAAA
chr17	45007086	45007087	chr17:45007087:G:A	rs75353403	G	A	G	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr17	45063626	45063627	chr17:45063627:A:G	rs113170866	A	G	a	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr17	45577842	45577843	chr17:45577843:C:T	rs7223018	C	T	.	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr17	45645822	45645823	chr17:45645823:G:A	rs413917	G	A	A	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr17	45918773	45918774	chr17:45918774:T:C	rs8080903	T	C	C	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr17	45923547	45923548	chr17:45923548:T:C	rs17649866	T	C	T	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr17	45949027	45949028	chr17:45949028:A:G	rs62062794	A	G	A	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr17	45952864	45952865	chr17:45952865:T:C	rs17650633	T	C	T	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr17	46072170	46072171	chr17:46072171:C:G	rs12150627	C	G	G	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr17	46122656	46122657	chr17:46122657:G:A	rs9910683	G	A	G	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr17	46122824	46122825	chr17:46122825:C:T	rs9910284	C	T	T	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr17	46122825	46122826	chr17:46122826:A:G	rs9908639	A	G	G	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr17	46211335	46211336	chr17:46211336:G:T	rs2696445	G	T	G	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr17	46275254	46275255	chr17:46275255:A:G	rs2696537	A	G	.	Hoxd9.mouse_homeodomain_1	2	1	+	8.287463081002919	5.5210272824374	CCAATAAAA
chr17	46275272	46275273	chr17:46275273:G:A	rs36039990	G	A	.	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr17	46286102	46286103	chr17:46286103:G:A	rs56022834	G	A	.	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr17	46772559	46772560	chr17:46772560:A:G	rs199522	A	G	A	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr17	46789203	46789204	chr17:46789204:G:C	rs12948390	G	C	G	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr17	46923630	46923631	chr17:46923631:G:A	rs7225428	G	A	A	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr17	47203890	47203891	chr17:47203891:T:G	rs17668126	T	G	T	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr17	47244881	47244882	chr17:47244882:T:G	rs67080286	T	G	G	Hoxd9.mouse_homeodomain_1	4	1	+	7.522691831404475	0.6808733840738688	CCCATAAAG
chr17	48003674	48003675	chr17:48003675:G:T	rs757351	G	T	G	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr17	48067837	48067838	chr17:48067838:A:G	rs12950225	A	G	A	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr17	48180982	48180983	chr17:48180983:A:G	rs208011	A	G	G	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr17	48230472	48230473	chr17:48230473:T:C	rs1975703	T	C	T	Hoxd9.mouse_homeodomain_1	1	1	-	8.027213970992095	2.5794857111073646	CACATAAAA
chr17	48510968	48510969	chr17:48510969:C:T	rs2036764	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	-	7.9772278588234515	7.188342824966311	GCAATAAAA
chr17	48513202	48513203	chr17:48513203:C:G	rs74454305	C	G	C	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr17	48547188	48547189	chr17:48547189:G:A	chr17:48547189:G:A	G	A	G	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr17	48573698	48573699	chr17:48573699:T:C	rs2288277	T	C	C	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr17	48577072	48577073	chr17:48577073:A:G	rs79154089	A	G	G	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr17	48581865	48581866	chr17:48581866:T:C	rs9907987	T	C	C	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr17	48584157	48584158	chr17:48584158:T:C	rs2288279	T	C	C	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr17	48584186	48584187	chr17:48584187:C:T	rs142395873	C	T	C	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr17	48589574	48589575	chr17:48589575:C:G	rs4793943	C	G	.	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr17	48619053	48619054	chr17:48619054:C:G	rs3809775	C	G	C	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr17	48748320	48748321	chr17:48748321:G:A	rs7208477	G	A	G	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr17	50235336	50235337	chr17:50235337:T:A	rs9908723	T	A	T	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr17	50244254	50244255	chr17:50244255:A:G	rs4289038	A	G	G	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr17	50244259	50244260	chr17:50244260:T:C	rs76004073	T	C	T	Hoxd9.mouse_homeodomain_1	5	1	-	7.34470511784777	0.970515399601214	GCCGTAAAA
chr17	50253682	50253683	chr17:50253683:G:A	rs11653170	G	A	G	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr17	50423996	50423997	chr17:50423997:G:A	rs80052401	G	A	g	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr17	50426667	50426668	chr17:50426668:G:T	chr17:50426668:G:T	G	T	G	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr17	50431398	50431399	chr17:50431399:A:G	rs79512866	A	G	A	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr17	50467681	50467682	chr17:50467682:C:T	rs79172040	C	T	C	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr17	50472095	50472096	chr17:50472096:C:T	rs9896780	C	T	C	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr17	50527696	50527697	chr17:50527697:C:G	rs898450	C	G	G	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr17	50866367	50866368	chr17:50866368:C:G	rs549959638	C	G	C	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr17	50866371	50866372	chr17:50866372:G:A	rs1056554507	G	A	G	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr17	50866384	50866385	chr17:50866385:T:C	chr17:50866385:T:C	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.678783717710262	7.34470511784777	GCCATAAAA
chr17	50866387	50866388	chr17:50866388:C:A	rs903148379	C	A	C	Hoxd9.mouse_homeodomain_1	0	1	-	8.678783717710262	7.094471634580788	GCCATAAAA
chr17	50893876	50893877	chr17:50893877:C:T	rs180803222	C	T	C	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr17	50966425	50966426	chr17:50966426:A:G	rs76182731	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.027213970992095	6.693135371129603	CACATAAAA
chr17	51006773	51006774	chr17:51006774:A:G	rs146068009	A	G	A	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr17	51122231	51122232	chr17:51122232:C:G	rs904951990	C	G	C	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr17	51146530	51146531	chr17:51146531:G:A	rs11656090	G	A	G	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr17	51146539	51146540	chr17:51146540:T:G	rs11652807	T	G	G	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr17	51270562	51270563	chr17:51270563:G:T	rs76779333	G	T	G	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr17	51385475	51385476	chr17:51385476:C:T	rs62062061	C	T	C	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr17	51479681	51479682	chr17:51479682:G:C	rs8073766	G	C	G	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr17	51667139	51667140	chr17:51667140:T:C	rs9912507	T	C	c	Hoxd9.mouse_homeodomain_1	3	1	-	8.98901893988973	7.654940340027237	CCCATAAAA
chr17	51914413	51914414	chr17:51914414:G:A	rs695187	G	A	A	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr17	52147537	52147538	chr17:52147538:T:C	rs2970052	T	C	C	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr17	52325391	52325392	chr17:52325392:T:C	rs1854265	T	C	T	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr17	52652090	52652091	chr17:52652091:T:C	rs9303603	T	C	T	Hoxd9.mouse_homeodomain_1	8	1	-	7.241935125048919	5.775608016563663	CCCATACAA
chr17	52696008	52696009	chr17:52696009:A:C	rs9915759	A	C	C	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr17	52718608	52718609	chr17:52718609:C:T	rs9900483	C	T	T	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr17	54058345	54058346	chr17:54058346:G:C	rs71385354	G	C	g	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr17	54573619	54573620	chr17:54573620:C:T	rs7213997	C	T	C	Hoxd9.mouse_homeodomain_1	1	1	+	7.889898683853121	6.575096769520114	ACCATAAAA
chr17	54796382	54796383	chr17:54796383:A:G	rs11653075	A	G	A	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr17	55274248	55274249	chr17:55274249:A:G	rs4147524	A	G	G	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr17	55327641	55327642	chr17:55327642:C:T	rs55721904	C	T	C	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr17	55601982	55601983	chr17:55601983:A:G	chr17:55601983:A:G	A	G	a	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr17	56047543	56047544	chr17:56047544:G:C	rs60518771	G	C	G	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr17	56071343	56071344	chr17:56071344:A:G	rs6505028	A	G	G	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr17	56319473	56319474	chr17:56319474:C:T	rs12944196	C	T	C	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr17	56716151	56716152	chr17:56716152:A:C	rs1002977317	A	C	A	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr17	56716182	56716183	chr17:56716183:T:G	rs572898284	T	G	T	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr17	56784741	56784742	chr17:56784742:A:G	rs11079259	A	G	G	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr17	56803210	56803211	chr17:56803211:G:A	rs6503765	G	A	G	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr17	57126829	57126830	chr17:57126830:T:C	rs4366770	T	C	T	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr17	57126839	57126840	chr17:57126840:T:C	rs4619453	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.287463081002919	6.953384481140425	CCAATAAAA
chr17	57140519	57140520	chr17:57140520:A:T	rs8079365	A	T	T	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr17	57189037	57189038	chr17:57189038:C:T	rs56310625	C	T	C	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr17	57396869	57396870	chr17:57396870:G:A	rs148663335	G	A	G	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr17	57445312	57445313	chr17:57445313:A:T	rs79985579	A	T	A	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr17	57445323	57445324	chr17:57445324:T:G	rs12949258	T	G	T	Hoxd9.mouse_homeodomain_1	6	1	-	8.027213970992095	6.2801301561512854	CACATAAAA
chr17	57528292	57528293	chr17:57528293:A:C	rs962633080	A	C	A	Hoxd9.mouse_homeodomain_1	8	1	+	7.674217025556723	6.141649400214323	CTCATAAAA
chr17	57539111	57539112	chr17:57539112:G:T	rs117957046	G	T	G	Hoxd9.mouse_homeodomain_1	0	1	-	8.98901893988973	7.889898683853121	CCCATAAAA
chr17	57756392	57756393	chr17:57756393:T:C	rs59881624	T	C	T	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr17	57794886	57794887	chr17:57794887:C:G	rs28843453	C	G	C	Hoxd9.mouse_homeodomain_1	0	1	+	7.707931958869418	7.39769673668995	CCAATTAAA
chr17	57926819	57926820	chr17:57926820:A:C	rs16942526	A	C	A	Hoxd9.mouse_homeodomain_1	6	1	+	7.889898683853121	6.1428148690123106	ACCATAAAA
chr17	58002142	58002143	chr17:58002143:T:G	rs73995414	T	G	T	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr17	58995339	58995340	chr17:58995340:T:C	rs8081967	T	C	C	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr17	59155763	59155764	chr17:59155764:G:A	rs182208974	G	A	G	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr17	59204731	59204732	chr17:59204732:G:A	rs6503904	G	A	-	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr17	59298474	59298475	chr17:59298475:A:G	rs56399527	A	G	A	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr17	59618407	59618408	chr17:59618408:C:T	rs4374230	C	T	T	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr17	59782650	59782651	chr17:59782651:C:T	rs575186337	C	T	C	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr17	59854952	59854953	chr17:59854953:T:A	rs1292066	T	A	A	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr17	60141779	60141780	chr17:60141780:T:C	rs2639692	T	C	-	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr17	60151693	60151694	chr17:60151694:G:A	rs144838071	G	A	-	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr17	60390932	60390933	chr17:60390933:A:C	rs16944313	A	C	A	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr17	60524648	60524649	chr17:60524649:A:G	rs1054716354	A	G	A	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr17	60524662	60524663	chr17:60524663:C:T	rs7215087	C	T	C	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr17	60601940	60601941	chr17:60601941:A:G	rs1480124969	A	G	A	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr17	60601950	60601951	chr17:60601951:C:A	rs8079652	C	A	A	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr17	60941290	60941291	chr17:60941291:C:T	rs180807030	C	T	C	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr17	60941317	60941318	chr17:60941318:A:C	chr17:60941318:A:C	A	C	A	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr17	61016982	61016983	chr17:61016983:C:T	rs73322796	C	T	C	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr17	61099520	61099521	chr17:61099521:A:T	rs112559795	A	T	T	Hoxd9.mouse_homeodomain_1	4	1	-	7.241935125048919	0.4001166777183126	CCCATACAA
chr17	61231423	61231424	chr17:61231424:C:A	rs73326883	C	A	C	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr17	61251734	61251735	chr17:61251735:A:G	rs142989187	A	G	A	Hoxd9.mouse_homeodomain_1	7	1	+	8.98901893988973	2.285192993297999	CCCATAAAA
chr17	61309775	61309776	chr17:61309776:T:G	rs6504033	T	G	G	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr17	61419948	61419949	chr17:61419949:G:A	rs9898324	G	A	G	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr17	61616618	61616619	chr17:61616619:A:G	rs6504058	A	G	A	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr17	61809974	61809975	chr17:61809975:C:T	rs62068836	C	T	C	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr17	61815869	61815870	chr17:61815870:T:G	rs12948762	T	G	G	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr17	61847500	61847501	chr17:61847501:T:C	rs9908659	T	C	T	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr17	62095211	62095212	chr17:62095212:C:T	rs11869921	C	T	c	Hoxd9.mouse_homeodomain_1	6	1	+	6.931699902869452	5.789367947679677	GCCATACAA
chr17	62316091	62316092	chr17:62316092:A:G	rs115432314	A	G	-	Hoxd9.mouse_homeodomain_1	5	1	+	8.287463081002919	1.9132733627563638	CCAATAAAA
chr17	62628885	62628886	chr17:62628886:T:C	rs547713459	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.707931958869418	6.373853359006924	CCAATTAAA
chr17	62738688	62738689	chr17:62738689:A:G	rs766038	A	G	G	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr17	62859242	62859243	chr17:62859243:T:G	rs1363824126	T	G	T	Hoxd9.mouse_homeodomain_1	6	1	-	7.889898683853121	6.1428148690123106	ACCATAAAA
chr17	63078809	63078810	chr17:63078810:A:G	rs148264971	A	G	A	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr17	63383693	63383694	chr17:63383694:C:A	rs9903758	C	A	C	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr17	63474188	63474189	chr17:63474189:G:A	rs7213516	G	A	G	Hoxd9.mouse_homeodomain_1	0	1	-	7.241935125048919	5.347387819739977	CCCATACAA
chr17	63477858	63477859	chr17:63477859:C:T	rs748472935	C	T	C	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr17	63498275	63498276	chr17:63498276:A:G	rs1055086	A	G	G	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr17	64085043	64085044	chr17:64085044:A:G	rs2088033	A	G	g	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr17	64155272	64155273	chr17:64155273:G:A	rs79877121	G	A	G	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr17	64159556	64159557	chr17:64159557:A:G	rs116880481	A	G	A	Hoxd9.mouse_homeodomain_1	4	1	-	7.716978748812629	5.061932103950051	GACATAAAA
chr17	64180776	64180777	chr17:64180777:A:G	rs9915750	A	G	G	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr17	64181072	64181073	chr17:64181073:A:T	rs11659074	A	T	T	Hoxd9.mouse_homeodomain_1	7	1	+	7.45645131454733	5.709367499706518	CCCATAAAC
chr17	64321358	64321359	chr17:64321359:G:A	rs71377739	G	A	G	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr17	64328008	64328009	chr17:64328009:C:T	rs1108591	C	T	C	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr17	64334224	64334225	chr17:64334225:C:T	rs73341028	C	T	T	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr17	64635693	64635694	chr17:64635694:T:C	rs188126319	T	C	T	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr17	64663599	64663600	chr17:64663600:T:C	rs7224517	T	C	C	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr17	64976258	64976259	chr17:64976259:A:C	rs11650284	A	C	C	Hoxd9.mouse_homeodomain_1	4	1	-	7.9772278588234515	1.1354094114928457	GCAATAAAA
chr17	64976262	64976263	chr17:64976263:C:T	rs11650325	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	-	7.9772278588234515	7.188342824966311	GCAATAAAA
chr17	64985114	64985115	chr17:64985115:A:G	rs62073275	A	G	A	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr17	65062269	65062270	chr17:65062270:C:T	rs3902181	C	T	T	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr17	65079364	65079365	chr17:65079365:T:C	rs1530350	T	C	C	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr17	65100381	65100382	chr17:65100382:G:T	rs149280629	G	T	G	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr17	65100407	65100408	chr17:65100408:G:T	rs62062507	G	T	G	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr17	65180997	65180998	chr17:65180998:A:G	rs7211506	A	G	G	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr17	65193698	65193699	chr17:65193699:G:A	rs2056050	G	A	G	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr17	65245594	65245595	chr17:65245595:G:A	rs7221051	G	A	A	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr17	65261899	65261900	chr17:65261900:A:G	rs4790952	A	G	G	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr17	65341689	65341690	chr17:65341690:G:A	rs116573095	G	A	G	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr17	65531101	65531102	chr17:65531102:G:A	rs4074947	G	A	G	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr17	65533374	65533375	chr17:65533375:T:C	rs35932683	T	C	T	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr17	65564034	65564035	chr17:65564035:A:G	rs11867847	A	G	A	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr17	65610089	65610090	chr17:65610090:C:T	rs7218547	C	T	C	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr17	65805474	65805475	chr17:65805475:G:C	rs17695630	G	C	G	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr17	65852755	65852756	chr17:65852756:T:C	rs11656577	T	C	T	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr17	65866648	65866649	chr17:65866649:T:G	rs7209112	T	G	G	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr17	66273344	66273345	chr17:66273345:G:A	rs117625507	G	A	G	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr17	66283102	66283103	chr17:66283103:C:T	rs34857989	C	T	C	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr17	66434230	66434231	chr17:66434231:T:C	rs971061	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.409487817756228	7.075409217893736	CCCATTAAA
chr17	66466666	66466667	chr17:66466667:G:A	rs8073985	G	A	A	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr17	66519007	66519008	chr17:66519008:A:G	rs76545009	A	G	a	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr17	66561979	66561980	chr17:66561980:T:C	rs7218402	T	C	C	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr17	66633812	66633813	chr17:66633813:T:C	rs139853781	T	C	T	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr17	66720356	66720357	chr17:66720357:T:C	rs75615630	T	C	T	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr17	66727331	66727332	chr17:66727332:G:A	rs3889477	G	A	G	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr17	66780728	66780729	chr17:66780729:G:A	rs113542727	G	A	g	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr17	66829600	66829601	chr17:66829601:C:T	rs151019977	C	T	C	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr17	66829811	66829812	chr17:66829812:G:C	rs78741253	G	C	G	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr17	66829812	66829813	chr17:66829813:C:T	rs72838660	C	T	C	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr17	66848392	66848393	chr17:66848393:A:G	rs6504464	A	G	G	Hoxd9.mouse_homeodomain_1	7	1	+	7.091711387329735	0.38788544073800313	CCCATCAAA
chr17	66920915	66920916	chr17:66920916:A:T	rs17645023	A	T	T	Hoxd9.mouse_homeodomain_1	8	1	+	8.027213970992095	5.094700846226028	CACATAAAA
chr17	67136974	67136975	chr17:67136975:T:A	rs79279536	T	A	T	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr17	67365667	67365668	chr17:67365668:T:C	rs74939752	T	C	T	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr17	67481650	67481651	chr17:67481651:A:C	rs4598946	A	C	a	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr17	67551325	67551326	chr17:67551326:G:A	rs8079845	G	A	G	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr17	68054518	68054519	chr17:68054519:G:A	rs143746000	G	A	g	Hoxd9.mouse_homeodomain_1	2	1	-	8.027213970992095	1.5397735133684596	CACATAAAA
chr17	68054527	68054528	chr17:68054528:T:C	rs150558333	T	C	t	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr17	68054529	68054530	chr17:68054530:C:T	chr17:68054530:C:T	C	T	c	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr17	68214232	68214233	chr17:68214233:A:T	rs1060687	A	T	A	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr17	68431377	68431378	chr17:68431378:C:T	rs12453629	C	T	C	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr17	69598247	69598248	chr17:69598248:T:C	rs61523697	T	C	T	Hoxd9.mouse_homeodomain_1	8	1	-	8.027213970992095	6.560886862506841	CACATAAAA
chr17	70038416	70038417	chr17:70038417:T:C	rs180165	T	C	T	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr17	70282006	70282007	chr17:70282007:T:G	rs1828812	T	G	G	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr17	70335697	70335698	chr17:70335698:C:G	rs312681	C	G	C	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr17	70336048	70336049	chr17:70336049:C:T	rs312683	C	T	C	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr17	70405976	70405977	chr17:70405977:C:T	rs376713134	C	T	C	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr17	70425104	70425105	chr17:70425105:T:C	rs2052078	T	C	T	Hoxd9.mouse_homeodomain_1	1	1	-	8.027213970992095	2.5794857111073646	CACATAAAA
chr17	70563582	70563583	chr17:70563583:A:G	rs11651609	A	G	A	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr17	71183216	71183217	chr17:71183217:C:T	rs73417929	C	T	C	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr17	71440367	71440368	chr17:71440368:G:C	rs11651604	G	C	G	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr17	71446541	71446542	chr17:71446542:G:A	rs756501	G	A	A	Hoxd9.mouse_homeodomain_1	2	1	-	8.678783717710262	2.1913432600866263	GCCATAAAA
chr17	71470176	71470177	chr17:71470177:T:C	rs2159041	T	C	T	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr17	71623697	71623698	chr17:71623698:C:T	rs66593980	C	T	C	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr17	71657375	71657376	chr17:71657376:C:T	rs113121672	C	T	C	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr17	71665844	71665845	chr17:71665845:C:T	chr17:71665845:C:T	C	T	C	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr17	72151439	72151440	chr17:72151440:T:C	rs1024826	T	C	T	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr17	72177627	72177628	chr17:72177628:C:T	rs72850157	C	T	C	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr17	72343014	72343015	chr17:72343015:G:C	rs77113365	G	C	G	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr17	72392398	72392399	chr17:72392399:C:T	rs575833627	C	T	C	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr17	72459588	72459589	chr17:72459589:C:T	rs12949342	C	T	C	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr17	72623207	72623208	chr17:72623208:G:A	rs116956401	G	A	G	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr17	72626188	72626189	chr17:72626189:T:C	rs74974166	T	C	T	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr17	72683671	72683672	chr17:72683672:C:T	rs11077628	C	T	C	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr17	72759692	72759693	chr17:72759693:G:A	rs962571	G	A	A	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr17	72823657	72823658	chr17:72823658:C:T	rs2714004	C	T	C	Hoxd9.mouse_homeodomain_1	1	1	+	7.075409217893736	5.760607303560727	CCCGTTAAA
chr17	72863576	72863577	chr17:72863577:C:T	rs56192323	C	T	C	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr17	72863584	72863585	chr17:72863585:T:C	rs8069654	T	C	T	Hoxd9.mouse_homeodomain_1	4	1	+	7.45645131454733	4.801404669684752	CCCATAAAC
chr17	72950589	72950590	chr17:72950590:T:A	rs8073848	T	A	T	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr17	73196815	73196816	chr17:73196816:C:T	rs1010442	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	-	7.1462160923678635	6.357331058510722	GCCATAAAC
chr17	73429653	73429654	chr17:73429654:T:C	rs11650519	T	C	T	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr17	73447556	73447557	chr17:73447557:C:T	rs7224502	C	T	C	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr17	73506699	73506700	chr17:73506700:G:A	rs11869311	G	A	A	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr17	73705722	73705723	chr17:73705723:T:C	rs2619994	T	C	C	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr17	73901415	73901416	chr17:73901416:G:A	rs10048174	G	A	G	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr17	73901619	73901620	chr17:73901620:T:C	rs4789591	T	C	C	Hoxd9.mouse_homeodomain_1	3	1	-	8.678783717710262	7.34470511784777	GCCATAAAA
chr17	74172974	74172975	chr17:74172975:C:T	rs1870998	C	T	T	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr17	74195331	74195332	chr17:74195332:C:T	rs746397	C	T	C	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr17	74195356	74195357	chr17:74195357:G:C	rs729191	G	C	G	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr17	74281549	74281550	chr17:74281550:G:A	rs62065702	G	A	G	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr17	74584898	74584899	chr17:74584899:C:T	rs7213068	C	T	C	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr17	75028053	75028054	chr17:75028054:A:C	rs9892373	A	C	A	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr17	75028090	75028091	chr17:75028091:C:T	rs34044266	C	T	C	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr17	75035056	75035057	chr17:75035057:G:C	rs148808947	G	C	G	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr17	75035057	75035058	chr17:75035058:C:T	rs114651322	C	T	C	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr17	75035067	75035068	chr17:75035068:T:A	rs545158057	T	A	T	Hoxd9.mouse_homeodomain_1	6	1	-	8.099252595576761	5.209836825546175	GCCATTAAA
chr17	75086976	75086977	chr17:75086977:A:G	rs76121410	A	G	A	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr17	75087653	75087654	chr17:75087654:G:A	rs114846892	G	A	G	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr17	75087674	75087675	chr17:75087675:C:T	rs886855060	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	-	7.212456609225008	6.423571575367866	GCCATAAAG
chr17	75160542	75160543	chr17:75160543:C:G	rs117450381	C	G	C	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr17	75249938	75249939	chr17:75249939:C:A	rs1471454	C	A	C	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr17	75390375	75390376	chr17:75390376:T:C	rs55768318	T	C	T	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr17	75562235	75562236	chr17:75562236:T:C	rs1470941	T	C	T	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr17	75699694	75699695	chr17:75699695:T:C	rs375798890	T	C	T	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr17	75712748	75712749	chr17:75712749:G:A	rs9898904	G	A	g	Hoxd9.mouse_homeodomain_1	2	1	-	6.943160709270972	0.4557202516473358	CCCATTAAG
chr17	75777024	75777025	chr17:75777025:G:A	rs10338	G	A	G	Hoxd9.mouse_homeodomain_1	2	1	-	8.409487817756228	1.922047360132591	CCCATTAAA
chr17	75777028	75777029	chr17:75777029:T:C	rs4567786	T	C	C	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr17	75855809	75855810	chr17:75855810:C:T	rs948462285	C	T	C	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr17	75876140	75876141	chr17:75876141:C:A	rs778518313	C	A	C	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr17	76049059	76049060	chr17:76049060:A:C	rs189640364	A	C	A	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr17	76234361	76234362	chr17:76234362:T:C	rs12232523	T	C	T	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr17	76238166	76238167	chr17:76238167:T:C	rs3859180	T	C	T	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr17	76282466	76282467	chr17:76282467:G:C	rs347674	G	C	C	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr17	76480896	76480897	chr17:76480897:G:A	rs538943159	G	A	g	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr17	76492739	76492740	chr17:76492740:C:A	rs1075663	C	A	C	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr17	76492773	76492774	chr17:76492774:G:A	rs150582835	G	A	G	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr17	76567092	76567093	chr17:76567093:A:G	rs2120886	A	G	A	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr17	76601703	76601704	chr17:76601704:G:A	rs188099360	G	A	G	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr17	76601730	76601731	chr17:76601731:G:T	rs181304434	G	T	G	Hoxd9.mouse_homeodomain_1	1	1	-	7.889898683853121	6.928093714955487	ACCATAAAA
chr17	76660155	76660156	chr17:76660156:A:G	rs16969187	A	G	A	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr17	76660202	76660203	chr17:76660203:G:T	rs1214685756	G	T	G	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr17	76686826	76686827	chr17:76686827:G:A	rs141218372	G	A	G	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr17	76709417	76709418	chr17:76709418:T:G	rs967322780	T	G	T	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr17	76848548	76848549	chr17:76848549:A:C	rs57189699	A	C	A	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr17	76917126	76917127	chr17:76917127:G:A	rs12452891	G	A	G	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr17	76919321	76919322	chr17:76919322:A:G	rs540982593	A	G	A	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr17	76919897	76919898	chr17:76919898:C:A	rs11077877	C	A	C	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr17	76951352	76951353	chr17:76951353:C:T	rs11869025	C	T	C	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr17	77070964	77070965	chr17:77070965:T:C	rs75679946	T	C	T	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr17	77150183	77150184	chr17:77150184:T:C	rs2176757	T	C	T	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr17	77155356	77155357	chr17:77155357:A:G	rs55972072	A	G	A	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr17	77168803	77168804	chr17:77168804:A:G	rs11871056	A	G	G	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr17	77232788	77232789	chr17:77232789:G:A	rs12943506	G	A	G	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr17	77235576	77235577	chr17:77235577:C:A	rs73363487	C	A	C	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr17	77439926	77439927	chr17:77439927:T:C	rs75226533	T	C	T	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr17	77477489	77477490	chr17:77477490:T:C	chr17:77477490:T:C	T	C	T	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr17	77525933	77525934	chr17:77525934:C:T	rs60733669	C	T	T	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr17	77531268	77531269	chr17:77531269:C:A	rs117231242	C	A	C	Hoxd9.mouse_homeodomain_1	0	1	+	8.287463081002919	7.188342824966311	CCAATAAAA
chr17	77532787	77532788	chr17:77532788:T:G	rs4462668	T	G	G	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr17	77543036	77543037	chr17:77543037:G:A	rs557051995	G	A	G	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr17	77543688	77543689	chr17:77543689:T:C	rs11077912	T	C	C	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr17	77556230	77556231	chr17:77556231:T:C	rs12452331	T	C	T	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr17	77654329	77654330	chr17:77654330:A:G	rs4441337	A	G	G	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr17	77690390	77690391	chr17:77690391:G:A	rs59961425	G	A	G	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr17	77690428	77690429	chr17:77690429:A:C	chr17:77690429:A:C	A	C	A	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr17	77690710	77690711	chr17:77690711:G:A	rs62077081	G	A	G	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr17	77887394	77887395	chr17:77887395:A:G	rs9892178	A	G	A	Hoxd9.mouse_homeodomain_1	4	1	-	6.943160709270972	4.288114064408394	CCCATTAAG
chr17	77913156	77913157	chr17:77913157:C:T	rs534849010	C	T	c	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr17	77963632	77963633	chr17:77963633:T:C	chr17:77963633:T:C	T	C	T	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr17	78197090	78197091	chr17:78197091:A:C	rs76913674	A	C	a	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr17	78251580	78251581	chr17:78251581:C:A	rs544394119	C	A	C	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr17	78268923	78268924	chr17:78268924:A:G	rs66478977	A	G	A	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr17	78378477	78378478	chr17:78378478:C:A	rs373591148	C	A	C	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr17	78381977	78381978	chr17:78381978:C:T	rs138727238	C	T	C	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr17	78413108	78413109	chr17:78413109:G:A	rs77998478	G	A	G	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr17	78439322	78439323	chr17:78439323:C:T	rs75445149	C	T	C	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr17	78439338	78439339	chr17:78439339:A:G	rs77752353	A	G	A	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr17	78439365	78439366	chr17:78439366:C:T	rs12150123	C	T	C	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr17	78516916	78516917	chr17:78516917:C:T	rs10048153	C	T	C	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr17	78529392	78529393	chr17:78529393:T:G	rs884714	T	G	G	Hoxd9.mouse_homeodomain_1	7	1	-	7.091711387329735	4.202295617299148	CCCATCAAA
chr17	78575477	78575478	chr17:78575478:T:C	rs1562102	T	C	t	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr17	78575496	78575497	chr17:78575497:G:T	rs9904706	G	T	G	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr17	78689448	78689449	chr17:78689449:T:C	rs73387896	T	C	T	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr17	78717715	78717716	chr17:78717716:C:T	rs552386888	C	T	T	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr17	78904656	78904657	chr17:78904657:G:A	rs115784699	G	A	G	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr17	79012070	79012071	chr17:79012071:C:T	rs113990000	C	T	C	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr17	79019465	79019466	chr17:79019466:C:T	rs73411194	C	T	C	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr17	79107994	79107995	chr17:79107995:G:A	rs74686730	G	A	A	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr17	79312699	79312700	chr17:79312700:C:T	rs4790005	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	+	8.027213970992095	6.132666665683155	CACATAAAA
chr17	79333258	79333259	chr17:79333259:G:A	rs2014989	G	A	G	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr17	79363992	79363993	chr17:79363993:G:A	rs72849701	G	A	G	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr17	79458217	79458218	chr17:79458218:G:A	rs12947772	G	A	G	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr17	79779063	79779064	chr17:79779064:G:C	rs191901944	G	C	G	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr17	79779110	79779111	chr17:79779111:T:C	rs115217657	T	C	T	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr17	79922115	79922116	chr17:79922116:A:G	rs2034126	A	G	A	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr17	79940312	79940313	chr17:79940313:G:A	rs3751947	G	A	G	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr17	79973998	79973999	chr17:79973999:C:T	rs148574057	C	T	C	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr17	79974601	79974602	chr17:79974602:G:T	rs1106645	G	T	G	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr17	80023289	80023290	chr17:80023290:T:G	rs12937211	T	G	G	Hoxd9.mouse_homeodomain_1	5	1	-	7.522691831404475	5.6253842788444794	CCCATAAAG
chr17	80099316	80099317	chr17:80099317:T:C	rs55662397	T	C	C	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr17	80099340	80099341	chr17:80099341:G:A	rs56176300	G	A	G	Hoxd9.mouse_homeodomain_1	8	1	+	7.522691831404475	8.98901893988973	CCCATAAAG
chr17	80228823	80228824	chr17:80228824:A:G	rs74000652	A	G	A	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr17	80262401	80262402	chr17:80262402:A:G	rs138105446	A	G	A	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr17	80331219	80331220	chr17:80331220:C:T	rs143280632	C	T	C	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr17	80501590	80501591	chr17:80501591:A:G	rs72853479	A	G	A	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr17	80600207	80600208	chr17:80600208:G:A	rs9901467	G	A	A	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr17	80641770	80641771	chr17:80641771:G:A	rs12940622	G	A	A	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr17	80702746	80702747	chr17:80702747:T:C	rs9894978	T	C	C	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr17	80704336	80704337	chr17:80704337:C:A	rs2315924	C	A	A	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr17	80718203	80718204	chr17:80718204:A:G	rs6565478	A	G	G	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr17	80737922	80737923	chr17:80737923:A:T	rs12936454	A	T	A	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr17	80740992	80740993	chr17:80740993:C:T	rs12947784	C	T	C	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr17	80900366	80900367	chr17:80900367:T:C	rs7208146	T	C	C	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr17	81125758	81125759	chr17:81125759:C:T	rs80116652	C	T	C	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr17	81406593	81406594	chr17:81406594:C:T	rs141526407	C	T	C	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr17	81584057	81584058	chr17:81584058:C:T	rs1025486545	C	T	A	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr17	81675336	81675337	chr17:81675337:T:G	rs72858871	T	G	T	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr17	81930987	81930988	chr17:81930988:G:C	rs74006140	G	C	C	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr17	82101468	82101469	chr17:82101469:G:A	rs140503759	G	A	G	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr17	82113367	82113368	chr17:82113368:T:C	rs7211808	T	C	C	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr17	82339241	82339242	chr17:82339242:A:T	rs149524820	A	T	A	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr17	82392055	82392056	chr17:82392056:G:A	rs8067393	G	A	G	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr17	82544716	82544717	chr17:82544717:A:G	rs72861059	A	G	A	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr17	82552053	82552054	chr17:82552054:T:C	rs565646815	T	C	T	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr17	82783697	82783698	chr17:82783698:G:A	rs149078490	G	A	G	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr17	82791658	82791659	chr17:82791659:A:G	rs144716612	A	G	A	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr17	82914438	82914439	chr17:82914439:T:C	rs62076067	T	C	T	Hoxd9.mouse_homeodomain_1	5	1	-	7.522691831404475	1.1485021131579192	CCCATAAAG
chr17	82957839	82957840	chr17:82957840:A:C	rs67082360	A	C	A	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr17	82983288	82983289	chr17:82983289:A:G	rs7406895	A	G	A	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr17	82984753	82984754	chr17:82984754:T:C	rs191178088	T	C	T	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr17	83158752	83158753	chr17:83158753:G:C	rs11489019	G	C	C	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr18	110488	110489	chr18:110489:A:G	rs75433157	A	G	.	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr18	158010	158011	chr18:158011:C:T	rs115488861	C	T	C	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr18	269080	269081	chr18:269081:G:C	rs141205460	G	C	G	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr18	286538	286539	chr18:286539:A:T	rs112034530	A	T	A	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr18	301381	301382	chr18:301382:A:G	rs73369937	A	G	g	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr18	363441	363442	chr18:363442:C:G	rs76379197	C	G	C	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr18	384970	384971	chr18:384971:C:G	rs4542729	C	G	G	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr18	413316	413317	chr18:413317:A:G	rs10460014	A	G	A	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr18	437231	437232	chr18:437232:T:C	rs2846642	T	C	T	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr18	692770	692771	chr18:692771:T:C	rs988219997	T	C	T	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr18	693766	693767	chr18:693767:C:T	rs2612082	C	T	C	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr18	742160	742161	chr18:742161:C:T	rs62088294	C	T	C	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr18	832482	832483	chr18:832483:G:C	rs9958927	G	C	C	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr18	894240	894241	chr18:894241:G:A	rs7241142	G	A	G	Hoxd9.mouse_homeodomain_1	0	1	-	7.522691831404475	5.628144526095533	CCCATAAAG
chr18	1306847	1306848	chr18:1306848:A:G	rs9807465	A	G	A	Hoxd9.mouse_homeodomain_1	8	1	+	8.287463081002919	6.821135972517665	CCAATAAAA
chr18	1351138	1351139	chr18:1351139:T:C	rs149785214	T	C	T	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr18	1438391	1438392	chr18:1438392:G:T	rs7506668	G	T	T	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr18	1965689	1965690	chr18:1965690:C:T	rs73377716	C	T	C	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr18	2191373	2191374	chr18:2191374:A:G	rs563626391	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.287463081002919	6.953384481140425	CCAATAAAA
chr18	2656503	2656504	chr18:2656504:C:G	rs111527232	C	G	C	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr18	2656516	2656517	chr18:2656517:C:T	rs939338460	C	T	C	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr18	2748159	2748160	chr18:2748160:T:C	rs8086338	T	C	T	Hoxd9.mouse_homeodomain_1	5	1	-	8.98901893988973	2.6148292216431743	CCCATAAAA
chr18	2795657	2795658	chr18:2795658:C:T	rs2298497	C	T	T	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr18	2822385	2822386	chr18:2822386:C:T	rs661165	C	T	C	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr18	2878060	2878061	chr18:2878061:A:T	rs59137814	A	T	T	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr18	2894165	2894166	chr18:2894166:G:A	rs16943997	G	A	G	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr18	2912757	2912758	chr18:2912758:C:A	rs3745016	C	A	A	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr18	3025465	3025466	chr18:3025466:A:G	rs7229727	A	G	a	Hoxd9.mouse_homeodomain_1	5	1	+	7.241935125048919	0.867745406802363	CCCATACAA
chr18	3171757	3171758	chr18:3171758:G:A	rs12965146	G	A	G	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr18	3607578	3607579	chr18:3607579:A:T	rs62083184	A	T	A	Hoxd9.mouse_homeodomain_1	8	1	+	7.241935125048919	4.309422000282851	CCCATACAA
chr18	3633010	3633011	chr18:3633011:G:A	rs74358590	G	A	G	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr18	3817520	3817521	chr18:3817521:G:A	rs3862174	G	A	G	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr18	3817521	3817522	chr18:3817522:T:C	rs3862173	T	C	T	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr18	3836848	3836849	chr18:3836849:G:A	rs3850803	G	A	T	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr18	4179844	4179845	chr18:4179845:C:A	rs6506192	C	A	A	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr18	4906912	4906913	chr18:4906913:G:A	rs78582018	G	A	A	Hoxd9.mouse_homeodomain_1	1	1	-	7.522691831404475	6.207889917071467	CCCATAAAG
chr18	5059381	5059382	chr18:5059382:A:G	rs928570850	A	G	A	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr18	5391741	5391742	chr18:5391742:G:A	rs73373997	G	A	G	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr18	5391748	5391749	chr18:5391749:C:T	rs112528741	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	+	8.409487817756228	6.514940512447287	CCCATTAAA
chr18	5772047	5772048	chr18:5772048:G:A	rs1917929	G	A	G	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr18	5840810	5840811	chr18:5840811:G:A	rs72855836	G	A	G	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr18	5956145	5956146	chr18:5956146:T:C	rs3737352	T	C	T	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr18	6625790	6625791	chr18:6625791:T:C	rs62081423	T	C	t	Hoxd9.mouse_homeodomain_1	3	1	-	8.678783717710262	7.34470511784777	GCCATAAAA
chr18	6711547	6711548	chr18:6711548:T:C	rs9950468	T	C	C	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr18	7090759	7090760	chr18:7090760:C:G	rs77931193	C	G	c	Hoxd9.mouse_homeodomain_1	6	1	+	7.241935125048919	2.285192993297999	CCCATACAA
chr18	7229108	7229109	chr18:7229109:G:A	rs62082838	G	A	G	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr18	7485223	7485224	chr18:7485224:A:G	rs525466	A	G	A	Hoxd9.mouse_homeodomain_1	6	1	+	7.716978748812629	1.0131528022208975	GACATAAAA
chr18	7790662	7790663	chr18:7790663:C:G	rs117002694	C	G	C	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr18	7872921	7872922	chr18:7872922:A:G	rs16952603	A	G	A	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr18	7900238	7900239	chr18:7900239:C:G	rs143769996	C	G	C	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr18	7939833	7939834	chr18:7939834:A:G	rs34580701	A	G	A	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr18	8219652	8219653	chr18:8219653:G:A	rs12458952	G	A	G	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr18	8374869	8374870	chr18:8374870:G:T	rs115358865	G	T	G	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr18	8627457	8627458	chr18:8627458:C:T	rs9949488	C	T	C	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr18	8788968	8788969	chr18:8788969:A:G	rs16954157	A	G	G	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr18	8849704	8849705	chr18:8849705:A:G	rs17486306	A	G	G	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr18	8900318	8900319	chr18:8900319:A:G	rs12458817	A	G	G	Hoxd9.mouse_homeodomain_1	3	1	+	8.027213970992095	6.693135371129603	CACATAAAA
chr18	9135778	9135779	chr18:9135779:G:C	chr18:9135779:G:C	G	C	g	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr18	9276190	9276191	chr18:9276191:G:T	rs8099583	G	T	T	Hoxd9.mouse_homeodomain_1	8	1	-	7.1462160923678635	8.678783717710262	GCCATAAAC
chr18	9416999	9417000	chr18:9417000:A:G	rs28550784	A	G	A	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr18	9417012	9417013	chr18:9417013:C:G	rs77705894	C	G	C	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr18	9446893	9446894	chr18:9446894:T:C	rs78859601	T	C	T	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr18	9450862	9450863	chr18:9450863:A:C	rs2864486	A	C	A	Hoxd9.mouse_homeodomain_1	7	1	+	8.678783717710262	5.789367947679677	GCCATAAAA
chr18	9478294	9478295	chr18:9478295:T:G	rs1561998	T	G	G	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr18	9683419	9683420	chr18:9683420:T:C	rs77433960	T	C	T	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr18	9749881	9749882	chr18:9749882:G:A	rs9951171	G	A	G	Hoxd9.mouse_homeodomain_1	0	1	-	7.522691831404475	5.628144526095533	CCCATAAAG
chr18	9758128	9758129	chr18:9758129:C:T	rs72955246	C	T	C	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr18	9758164	9758165	chr18:9758165:C:T	rs117441120	C	T	C	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr18	9760944	9760945	chr18:9760945:G:A	rs9304044	G	A	G	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr18	9869957	9869958	chr18:9869958:T:G	rs75949414	T	G	T	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr18	9988326	9988327	chr18:9988327:T:C	rs29030	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.091711387329735	5.757632787467242	CCCATCAAA
chr18	10024473	10024474	chr18:10024474:G:A	rs28668944	G	A	G	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr18	10121104	10121105	chr18:10121105:C:A	rs567479	C	A	A	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr18	10181823	10181824	chr18:10181824:C:A	rs12962547	C	A	C	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr18	10251210	10251211	chr18:10251211:C:T	rs116189597	C	T	C	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr18	10369439	10369440	chr18:10369440:G:A	rs10502398	G	A	G	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr18	10455309	10455310	chr18:10455310:A:C	rs115030412	A	C	A	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr18	10567784	10567785	chr18:10567785:T:C	rs475411	T	C	T	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr18	10594461	10594462	chr18:10594462:A:G	rs12606867	A	G	A	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr18	10660549	10660550	chr18:10660550:T:C	rs76486235	T	C	T	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr18	10843343	10843344	chr18:10843344:T:C	rs1683377	T	C	T	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr18	10879254	10879255	chr18:10879255:T:A	rs11661818	T	A	T	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr18	10884226	10884227	chr18:10884227:G:A	rs264209	G	A	A	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr18	10890078	10890079	chr18:10890079:C:T	rs264221	C	T	C	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr18	11038212	11038213	chr18:11038213:A:C	rs1258808727	A	C	A	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr18	11051081	11051082	chr18:11051082:G:A	rs8095703	G	A	G	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr18	11078646	11078647	chr18:11078647:C:A	rs9959126	C	A	A	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr18	11259797	11259798	chr18:11259798:C:G	rs7243240	C	G	C	Hoxd9.mouse_homeodomain_1	3	1	-	7.075409217893736	1.833979713552747	CCCGTTAAA
chr18	11378847	11378848	chr18:11378848:A:G	rs16976210	A	G	G	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr18	11666732	11666733	chr18:11666733:G:C	rs575396057	G	C	G	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr18	11666737	11666738	chr18:11666738:C:T	rs989096833	C	T	c	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr18	11667550	11667551	chr18:11667551:G:T	rs4541146	G	T	G	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr18	11850827	11850828	chr18:11850828:T:G	rs79875741	T	G	T	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr18	11850835	11850836	chr18:11850836:C:G	rs1352879842	C	G	C	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr18	11962418	11962419	chr18:11962419:C:A	rs79204434	C	A	C	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr18	12039414	12039415	chr18:12039415:T:C	rs4797609	T	C	T	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr18	12039439	12039440	chr18:12039440:G:A	rs4797610	G	A	A	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr18	12259040	12259041	chr18:12259041:C:G	rs73413079	C	G	c	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr18	12374675	12374676	chr18:12374676:G:C	rs749864123	G	C	G	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr18	12374683	12374684	chr18:12374684:C:A	rs78464739	C	A	C	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr18	12409848	12409849	chr18:12409849:G:A	rs117741206	G	A	G	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr18	12645477	12645478	chr18:12645478:A:G	rs35612342	A	G	A	Hoxd9.mouse_homeodomain_1	1	1	+	8.027213970992095	2.5794857111073646	CACATAAAA
chr18	12728657	12728658	chr18:12728658:G:A	rs2542176	G	A	G	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr18	12777841	12777842	chr18:12777842:G:A	rs2847275	G	A	A	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr18	12883038	12883039	chr18:12883039:C:T	chr18:12883039:C:T	C	T	C	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr18	13256441	13256442	chr18:13256442:C:T	rs60378227	C	T	C	Hoxd9.mouse_homeodomain_1	5	1	+	7.091711387329735	8.409487817756228	CCCATCAAA
chr18	13313994	13313995	chr18:13313995:G:A	rs4797761	G	A	G	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr18	13474957	13474958	chr18:13474958:C:T	rs8083180	C	T	C	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr18	13565172	13565173	chr18:13565173:T:G	rs8097832	T	G	T	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr18	13890014	13890015	chr18:13890015:C:T	rs28635426	C	T	C	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr18	13983649	13983650	chr18:13983650:G:A	rs10502426	G	A	G	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr18	14697864	14697865	chr18:14697865:T:C	rs12957994	T	C	c	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr18	14697874	14697875	chr18:14697875:A:G	rs138132843	A	G	a	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr18	14916786	14916787	chr18:14916787:G:A	rs785997	G	A	.	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr18	14934104	14934105	chr18:14934105:C:G	rs73417168	C	G	.	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr18	15404927	15404928	chr18:15404928:A:G	rs62090975	A	G	.	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr18	15407672	15407673	chr18:15407673:T:G	rs7240560	T	G	.	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr18	15408187	15408188	chr18:15408188:A:T	rs6565796	A	T	.	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr18	15409892	15409893	chr18:15409893:C:A	rs6565803	C	A	.	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr18	15409895	15409896	chr18:15409896:T:C	rs7407384	T	C	.	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr18	15696103	15696104	chr18:15696104:T:A	rs1199994824	T	A	.	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr18	16069154	16069155	chr18:16069155:C:A	chr18:16069155:C:A	C	A	.	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr18	16069164	16069165	chr18:16069165:C:A	rs1409371697	C	A	.	Hoxd9.mouse_homeodomain_1	2	1	+	8.98901893988973	8.287463081002919	CCCATAAAA
chr18	18886458	18886459	chr18:18886459:A:G	rs1303471041	A	G	.	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr18	18888815	18888816	chr18:18888816:G:A	rs1198592858	G	A	.	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr18	21112382	21112383	chr18:21112383:T:G	rs35996865	T	G	T	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr18	21112386	21112387	chr18:21112387:A:G	chr18:21112387:A:G	A	G	A	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr18	21394164	21394165	chr18:21394165:T:C	rs78364389	T	C	T	Hoxd9.mouse_homeodomain_1	7	1	-	7.091711387329735	0.38788544073800313	CCCATCAAA
chr18	22186225	22186226	chr18:22186226:C:T	rs1319162948	C	T	C	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr18	22223257	22223258	chr18:22223258:C:T	rs11664999	C	T	C	Hoxd9.mouse_homeodomain_1	8	1	-	7.212456609225008	8.678783717710262	GCCATAAAG
chr18	22450509	22450510	chr18:22450510:T:A	rs150990625	T	A	T	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr18	22563187	22563188	chr18:22563188:C:T	rs149403030	C	T	C	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr18	22625473	22625474	chr18:22625474:A:G	rs12326842	A	G	A	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr18	22671702	22671703	chr18:22671703:T:C	rs35547527	T	C	T	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr18	22751989	22751990	chr18:22751990:C:T	rs60680704	C	T	C	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr18	23006281	23006282	chr18:23006282:C:T	rs72889626	C	T	c	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr18	23261040	23261041	chr18:23261041:G:A	rs79453688	G	A	G	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr18	23394693	23394694	chr18:23394694:G:A	rs9955031	G	A	G	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr18	23486858	23486859	chr18:23486859:C:T	rs76869171	C	T	C	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr18	23486956	23486957	chr18:23486957:A:G	rs11663607	A	G	G	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr18	23532960	23532961	chr18:23532961:C:T	rs919149066	C	T	C	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr18	23590895	23590896	chr18:23590896:G:T	rs8084691	G	T	G	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr18	24096259	24096260	chr18:24096260:A:G	rs2120571	A	G	A	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr18	24141481	24141482	chr18:24141482:T:C	rs62089642	T	C	T	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr18	24231830	24231831	chr18:24231831:A:G	rs8087792	A	G	A	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr18	24268983	24268984	chr18:24268984:G:C	rs76888153	G	C	G	Hoxd9.mouse_homeodomain_1	0	1	+	8.678783717710262	8.98901893988973	GCCATAAAA
chr18	24273489	24273490	chr18:24273490:C:T	rs73392258	C	T	C	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr18	24679410	24679411	chr18:24679411:T:C	rs111726008	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.409487817756228	7.075409217893736	CCCATTAAA
chr18	24883265	24883266	chr18:24883266:G:A	rs10502461	G	A	G	Hoxd9.mouse_homeodomain_1	1	1	-	8.98901893988973	7.674217025556723	CCCATAAAA
chr18	25153457	25153458	chr18:25153458:C:T	rs55664223	C	T	C	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr18	25321586	25321587	chr18:25321587:A:C	rs4800629	A	C	a	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr18	25348873	25348874	chr18:25348874:G:A	rs114750281	G	A	G	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr18	25348908	25348909	chr18:25348909:G:T	rs6508365	G	T	G	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr18	25352742	25352743	chr18:25352743:A:C	chr18:25352743:A:C	A	C	A	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr18	25370122	25370123	chr18:25370123:A:G	rs55867515	A	G	A	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr18	25532208	25532209	chr18:25532209:G:C	rs16941579	G	C	G	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr18	25606932	25606933	chr18:25606933:C:T	rs273744	C	T	c	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr18	26019533	26019534	chr18:26019534:G:A	rs58277476	G	A	G	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr18	26036854	26036855	chr18:26036855:T:C	rs78675702	T	C	T	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr18	26514051	26514052	chr18:26514052:T:C	rs9965531	T	C	T	Hoxd9.mouse_homeodomain_1	2	1	-	8.287463081002919	5.5210272824374	CCAATAAAA
chr18	26658226	26658227	chr18:26658227:C:A	rs117203015	C	A	C	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr18	26701856	26701857	chr18:26701857:T:C	rs16960655	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.98901893988973	7.654940340027237	CCCATAAAA
chr18	27153867	27153868	chr18:27153868:T:C	rs11662121	T	C	T	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr18	27153888	27153889	chr18:27153889:G:C	rs11664438	G	C	C	Hoxd9.mouse_homeodomain_1	2	1	-	7.716978748812629	4.248987091360299	GACATAAAA
chr18	27499044	27499045	chr18:27499045:C:T	rs582813	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	+	8.409487817756228	6.514940512447287	CCCATTAAA
chr18	27685982	27685983	chr18:27685983:T:C	rs143045061	T	C	T	Hoxd9.mouse_homeodomain_1	2	1	-	8.287463081002919	5.5210272824374	CCAATAAAA
chr18	27685985	27685986	chr18:27685986:G:T	rs6508498	G	T	T	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr18	27807972	27807973	chr18:27807973:A:G	rs56300506	A	G	A	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr18	28136370	28136371	chr18:28136371:G:A	rs6508525	G	A	G	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr18	28412571	28412572	chr18:28412572:A:T	rs11083276	A	T	A	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr18	28565692	28565693	chr18:28565693:G:T	rs16944922	G	T	T	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr18	28589071	28589072	chr18:28589072:G:A	rs11877894	G	A	G	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr18	28668543	28668544	chr18:28668544:A:G	rs1496486	A	G	g	Hoxd9.mouse_homeodomain_1	4	1	-	7.716978748812629	5.061932103950051	GACATAAAA
chr18	28835644	28835645	chr18:28835645:T:C	rs34911383	T	C	T	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr18	28914193	28914194	chr18:28914194:A:G	rs528129	A	G	G	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr18	29164008	29164009	chr18:29164009:A:G	rs558200647	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.287463081002919	6.953384481140425	CCAATAAAA
chr18	29309702	29309703	chr18:29309703:T:A	rs16960815	T	A	T	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr18	29761833	29761834	chr18:29761834:T:C	rs73951079	T	C	T	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr18	30281467	30281468	chr18:30281468:T:G	rs16947789	T	G	T	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr18	30419918	30419919	chr18:30419919:T:C	rs4473273	T	C	C	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr18	30419956	30419957	chr18:30419957:C:T	rs62078723	C	T	C	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr18	30440574	30440575	chr18:30440575:C:T	rs58106920	C	T	C	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr18	30859231	30859232	chr18:30859232:A:G	rs3910337	A	G	G	Hoxd9.mouse_homeodomain_1	6	1	+	8.678783717710262	1.9749577711185315	GCCATAAAA
chr18	30859244	30859245	chr18:30859245:G:A	rs1435268	G	A	A	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr18	31088736	31088737	chr18:31088737:C:G	rs1550237	C	G	C	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr18	31184356	31184357	chr18:31184357:G:A	rs7243239	G	A	A	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr18	31207162	31207163	chr18:31207163:T:G	rs74588682	T	G	T	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr18	31207169	31207170	chr18:31207170:A:C	chr18:31207170:A:C	A	C	A	Hoxd9.mouse_homeodomain_1	4	1	-	7.889898683853121	1.0480802365225155	ACCATAAAA
chr18	31233354	31233355	chr18:31233355:T:A	rs7243638	T	A	A	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr18	31269216	31269217	chr18:31269217:G:A	rs1241660923	G	A	G	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr18	31269251	31269252	chr18:31269252:G:A	rs16961589	G	A	G	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr18	31387830	31387831	chr18:31387831:G:A	rs9951411	G	A	A	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr18	31399883	31399884	chr18:31399884:T:A	rs6506920	T	A	A	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr18	31494143	31494144	chr18:31494144:C:T	rs72938857	C	T	T	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr18	31556049	31556050	chr18:31556050:A:G	rs1667221	A	G	A	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr18	31687692	31687693	chr18:31687693:A:T	rs71361337	A	T	A	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr18	31794219	31794220	chr18:31794220:C:T	rs638252	C	T	T	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr18	31974291	31974292	chr18:31974292:C:T	rs8095428	C	T	T	Hoxd9.mouse_homeodomain_1	0	1	+	8.027213970992095	6.132666665683155	CACATAAAA
chr18	32427779	32427780	chr18:32427780:T:C	rs7245123	T	C	C	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr18	32477386	32477387	chr18:32477387:A:G	rs72937403	A	G	A	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr18	32533168	32533169	chr18:32533169:G:A	rs11664392	G	A	g	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr18	32731281	32731282	chr18:32731282:G:A	rs12968928	G	A	A	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr18	32731282	32731283	chr18:32731283:T:C	rs12969760	T	C	C	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr18	32966332	32966333	chr18:32966333:T:C	rs74883326	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.287463081002919	6.953384481140425	CCAATAAAA
chr18	33200264	33200265	chr18:33200265:C:T	rs271533	C	T	C	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr18	33459826	33459827	chr18:33459827:G:C	rs11081812	G	C	G	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr18	33756855	33756856	chr18:33756856:A:T	rs9967587	A	T	T	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr18	33802521	33802522	chr18:33802522:A:G	rs7235698	A	G	G	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr18	33837207	33837208	chr18:33837208:T:C	rs8091940	T	C	C	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr18	33852910	33852911	chr18:33852911:A:G	rs116742662	A	G	A	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr18	34039843	34039844	chr18:34039844:A:C	rs62097847	A	C	C	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr18	34400026	34400027	chr18:34400027:C:T	rs8095969	C	T	T	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr18	34875414	34875415	chr18:34875415:T:C	rs541157	T	C	T	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr18	35030589	35030590	chr18:35030590:T:C	chr18:35030590:T:C	T	C	T	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr18	35061536	35061537	chr18:35061537:A:G	rs116179831	A	G	A	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr18	35345117	35345118	chr18:35345118:C:T	chr18:35345118:C:T	C	T	C	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr18	35506266	35506267	chr18:35506267:C:G	rs62100510	C	G	C	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr18	35748092	35748093	chr18:35748093:G:A	rs72893621	G	A	G	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr18	35783150	35783151	chr18:35783151:G:C	chr18:35783151:G:C	G	C	G	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr18	35950648	35950649	chr18:35950649:T:C	rs73946738	T	C	T	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr18	36092147	36092148	chr18:36092148:A:G	rs72884999	A	G	A	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr18	36094844	36094845	chr18:36094845:A:G	rs7235371	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.287463081002919	6.953384481140425	CCAATAAAA
chr18	36265044	36265045	chr18:36265045:G:T	rs12455272	G	T	T	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr18	36457589	36457590	chr18:36457590:C:T	rs7238168	C	T	T	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr18	36460622	36460623	chr18:36460623:T:C	rs73421036	T	C	T	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr18	36510996	36510997	chr18:36510997:A:G	rs7242523	A	G	A	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr18	36587183	36587184	chr18:36587184:T:C	rs12963116	T	C	t	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr18	36607272	36607273	chr18:36607273:A:G	rs2848905	A	G	a	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr18	36757255	36757256	chr18:36757256:C:T	rs1001033	C	T	C	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr18	36899489	36899490	chr18:36899490:A:G	rs181763757	A	G	A	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr18	37167691	37167692	chr18:37167692:T:C	rs72896183	T	C	T	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr18	37450165	37450166	chr18:37450166:G:A	rs1791478	G	A	G	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr18	37484974	37484975	chr18:37484975:G:T	rs150625376	G	T	G	Hoxd9.mouse_homeodomain_1	1	1	-	7.889898683853121	6.928093714955487	ACCATAAAA
chr18	37563851	37563852	chr18:37563852:G:A	rs16969078	G	A	G	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr18	37955264	37955265	chr18:37955265:A:G	rs11664147	A	G	A	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr18	38053146	38053147	chr18:38053147:G:A	rs56085859	G	A	G	Hoxd9.mouse_homeodomain_1	1	1	-	8.678783717710262	7.363981803377255	GCCATAAAA
chr18	38520115	38520116	chr18:38520116:A:G	rs17640951	A	G	A	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr18	38635791	38635792	chr18:38635792:C:T	rs6507263	C	T	C	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr18	38936148	38936149	chr18:38936149:C:T	rs7229784	C	T	C	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr18	39384253	39384254	chr18:39384254:G:T	rs2589034	G	T	T	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr18	39751333	39751334	chr18:39751334:G:T	rs1513680	G	T	G	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr18	39946214	39946215	chr18:39946215:A:G	rs307098	A	G	G	Hoxd9.mouse_homeodomain_1	3	1	+	8.027213970992095	6.693135371129603	CACATAAAA
chr18	39992125	39992126	chr18:39992126:A:C	rs8083471	A	C	A	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr18	40017415	40017416	chr18:40017416:T:C	rs7230443	T	C	T	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr18	40376060	40376061	chr18:40376061:T:C	rs1433851	T	C	C	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr18	40395980	40395981	chr18:40395981:A:G	rs4239359	A	G	A	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr18	40493188	40493189	chr18:40493189:G:A	rs203178	G	A	G	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr18	40559115	40559116	chr18:40559116:C:T	rs4129493	C	T	C	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr18	41360814	41360815	chr18:41360815:G:A	rs11663692	G	A	G	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr18	41594640	41594641	chr18:41594641:A:C	rs996353516	A	C	A	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr18	41972456	41972457	chr18:41972457:T:G	rs144405297	T	G	T	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr18	42112999	42113000	chr18:42113000:C:G	rs7237998	C	G	C	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr18	42192444	42192445	chr18:42192445:C:A	rs16960216	C	A	C	Hoxd9.mouse_homeodomain_1	8	1	+	7.45645131454733	8.98901893988973	CCCATAAAC
chr18	42425151	42425152	chr18:42425152:T:G	rs73473217	T	G	T	Hoxd9.mouse_homeodomain_1	6	1	-	8.287463081002919	6.540379266162109	CCAATAAAA
chr18	42537332	42537333	chr18:42537333:A:G	rs74972363	A	G	A	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr18	42978429	42978430	chr18:42978430:C:G	rs116904692	C	G	C	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr18	42978438	42978439	chr18:42978439:T:G	chr18:42978439:T:G	T	G	T	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr18	43392457	43392458	chr18:43392458:T:A	rs532528	T	A	T	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr18	43622283	43622284	chr18:43622284:G:A	rs16977608	G	A	A	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr18	43863348	43863349	chr18:43863349:A:C	rs76188586	A	C	A	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr18	43935004	43935005	chr18:43935005:T:C	rs73954122	T	C	T	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr18	43935016	43935017	chr18:43935017:G:A	rs7239523	G	A	A	Hoxd9.mouse_homeodomain_1	0	1	+	8.099252595576761	7.3103675617196195	GCCATTAAA
chr18	43935387	43935388	chr18:43935388:A:G	rs141546479	A	G	A	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr18	44194894	44194895	chr18:44194895:C:A	rs596725	C	A	C	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr18	44213629	44213630	chr18:44213630:T:G	rs9304302	T	G	T	Hoxd9.mouse_homeodomain_1	6	1	-	8.027213970992095	6.2801301561512854	CACATAAAA
chr18	44360091	44360092	chr18:44360092:T:C	rs28761170	T	C	t	Hoxd9.mouse_homeodomain_1	6	1	-	7.889898683853121	1.18607273726139	ACCATAAAA
chr18	44450222	44450223	chr18:44450223:A:G	rs28547892	A	G	A	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr18	44505790	44505791	chr18:44505791:G:A	rs16978042	G	A	A	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr18	44925065	44925066	chr18:44925066:G:A	rs183753171	G	A	G	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr18	44946837	44946838	chr18:44946838:T:C	rs7235070	T	C	T	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr18	45130394	45130395	chr18:45130395:C:T	rs193280367	C	T	C	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr18	45305745	45305746	chr18:45305746:G:A	rs115783702	G	A	G	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr18	45365951	45365952	chr18:45365952:T:C	rs16978353	T	C	T	Hoxd9.mouse_homeodomain_1	4	1	+	7.45645131454733	4.801404669684752	CCCATAAAC
chr18	45365967	45365968	chr18:45365968:G:A	rs2247684	G	A	A	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr18	45540173	45540174	chr18:45540174:T:C	rs16978398	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.099252595576761	6.765173995714267	GCCATTAAA
chr18	45629860	45629861	chr18:45629861:T:C	rs560056666	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.091711387329735	5.757632787467242	CCCATCAAA
chr18	45635995	45635996	chr18:45635996:C:G	rs34514416	C	G	C	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr18	45844805	45844806	chr18:45844806:A:C	rs75370733	A	C	A	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr18	45889613	45889614	chr18:45889614:G:C	rs11082494	G	C	C	Hoxd9.mouse_homeodomain_1	0	1	+	7.9772278588234515	8.287463081002919	GCAATAAAA
chr18	46161775	46161776	chr18:46161776:G:A	rs12457740	G	A	G	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr18	46200638	46200639	chr18:46200639:G:C	rs12953780	G	C	g	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr18	46226627	46226628	chr18:46226628:C:T	rs537831586	C	T	C	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr18	46226628	46226629	chr18:46226629:A:G	rs1231586497	A	G	A	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr18	46226645	46226646	chr18:46226646:T:C	rs72905318	T	C	T	Hoxd9.mouse_homeodomain_1	5	1	-	8.027213970992095	1.6530242527455408	CACATAAAA
chr18	46321366	46321367	chr18:46321367:T:C	chr18:46321367:T:C	T	C	T	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr18	46321653	46321654	chr18:46321654:C:T	rs4890642	C	T	T	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr18	46374407	46374408	chr18:46374408:C:T	rs4890644	C	T	C	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr18	46408491	46408492	chr18:46408492:A:G	rs17760907	A	G	a	Hoxd9.mouse_homeodomain_1	3	1	+	8.409487817756228	7.075409217893736	CCCATTAAA
chr18	46638087	46638088	chr18:46638088:G:A	rs72915441	G	A	G	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr18	46638093	46638094	chr18:46638094:G:A	rs77493019	G	A	G	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr18	46758281	46758282	chr18:46758282:A:G	rs3809962	A	G	A	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr18	46897912	46897913	chr18:46897913:C:T	rs8092148	C	T	C	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr18	47121132	47121133	chr18:47121133:G:A	rs62096474	G	A	G	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr18	47250181	47250182	chr18:47250182:A:G	rs73956108	A	G	A	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr18	47717063	47717064	chr18:47717064:A:G	rs11661072	A	G	A	Hoxd9.mouse_homeodomain_1	8	1	+	7.889898683853121	6.423571575367866	ACCATAAAA
chr18	47937031	47937032	chr18:47937032:T:G	rs4940120	T	G	G	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr18	48065553	48065554	chr18:48065554:G:A	rs139641438	G	A	G	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr18	48106757	48106758	chr18:48106758:A:G	rs4527084	A	G	A	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr18	48154902	48154903	chr18:48154903:G:C	rs34530733	G	C	G	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr18	48167909	48167910	chr18:48167910:C:T	rs6507820	C	T	c	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr18	48192427	48192428	chr18:48192428:G:A	rs8092130	G	A	A	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr18	48350900	48350901	chr18:48350901:C:G	rs10401107	C	G	G	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr18	48398624	48398625	chr18:48398625:A:G	rs4264461	A	G	G	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr18	48656706	48656707	chr18:48656707:A:G	rs9646523	A	G	G	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr18	48656940	48656941	chr18:48656941:T:C	rs932547340	T	C	T	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr18	48678473	48678474	chr18:48678474:G:A	rs299736	G	A	G	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr18	48772335	48772336	chr18:48772336:T:C	rs13381292	T	C	T	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr18	49160689	49160690	chr18:49160690:G:A	rs57434680	G	A	G	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr18	49339020	49339021	chr18:49339021:C:A	rs478682	C	A	A	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr18	49438460	49438461	chr18:49438461:A:G	rs77242667	A	G	A	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr18	49446774	49446775	chr18:49446775:C:T	rs188240378	C	T	C	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr18	49447800	49447801	chr18:49447801:G:A	rs76046877	G	A	A	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr18	49476458	49476459	chr18:49476459:T:C	rs6507915	T	C	C	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr18	49660376	49660377	chr18:49660377:G:C	rs11662277	G	C	G	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr18	49679061	49679062	chr18:49679062:A:G	rs11875988	A	G	A	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr18	49781779	49781780	chr18:49781780:A:G	rs11659231	A	G	A	Hoxd9.mouse_homeodomain_1	5	1	+	7.9772278588234515	1.603038140576896	GCAATAAAA
chr18	49893619	49893620	chr18:49893620:T:C	rs11876567	T	C	C	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr18	49955518	49955519	chr18:49955519:A:G	chr18:49955519:A:G	A	G	A	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr18	50013650	50013651	chr18:50013651:G:A	rs117180103	G	A	G	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr18	50338325	50338326	chr18:50338326:A:G	rs6507979	A	G	G	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr18	50374201	50374202	chr18:50374202:C:G	rs78075672	C	G	C	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr18	50591989	50591990	chr18:50591990:G:A	rs4322755	G	A	G	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr18	50987055	50987056	chr18:50987056:A:G	rs34524743	A	G	A	Hoxd9.mouse_homeodomain_1	4	1	-	7.889898683853121	5.234852038990543	ACCATAAAA
chr18	51027798	51027799	chr18:51027799:C:A	rs35656226	C	A	C	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr18	51031189	51031190	chr18:51031190:A:G	rs3829616	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.287463081002919	6.953384481140425	CCAATAAAA
chr18	51039923	51039924	chr18:51039924:A:G	rs1039603397	A	G	A	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr18	51160721	51160722	chr18:51160722:A:T	rs12606946	A	T	A	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr18	51160727	51160728	chr18:51160728:G:A	rs11663585	G	A	G	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr18	51162505	51162506	chr18:51162506:C:T	rs11664638	C	T	C	Hoxd9.mouse_homeodomain_1	8	1	-	7.212456609225008	8.678783717710262	GCCATAAAG
chr18	51430156	51430157	chr18:51430157:G:A	rs321852	G	A	A	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr18	51692218	51692219	chr18:51692219:T:C	rs1394354	T	C	T	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr18	51861288	51861289	chr18:51861289:G:A	rs17752743	G	A	G	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr18	51908403	51908404	chr18:51908404:G:A	rs10520815	G	A	G	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr18	52061471	52061472	chr18:52061472:T:A	rs4366801	T	A	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.98901893988973	6.985537803081085	CCCATAAAA
chr18	52178138	52178139	chr18:52178139:T:C	rs72928711	T	C	T	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr18	52353407	52353408	chr18:52353408:A:T	rs1443569	A	T	T	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr18	52717472	52717473	chr18:52717473:A:C	rs192197760	A	C	A	Hoxd9.mouse_homeodomain_1	4	1	-	7.522691831404475	0.6808733840738688	CCCATAAAG
chr18	52832738	52832739	chr18:52832739:C:T	rs9948149	C	T	C	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr18	53306711	53306712	chr18:53306712:A:C	rs4940251	A	C	A	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr18	53306712	53306713	chr18:53306713:A:G	rs4940252	A	G	G	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr18	53735836	53735837	chr18:53735837:C:T	rs2879600	C	T	T	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr18	53749136	53749137	chr18:53749137:T:G	rs12454123	T	G	T	Hoxd9.mouse_homeodomain_1	6	1	-	8.027213970992095	6.2801301561512854	CACATAAAA
chr18	53749145	53749146	chr18:53749146:G:A	rs7226620	G	A	G	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr18	53749156	53749157	chr18:53749157:A:G	rs7245218	A	G	A	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr18	53818486	53818487	chr18:53818487:A:C	rs7238793	A	C	A	Hoxd9.mouse_homeodomain_1	7	1	+	8.027213970992095	5.137798200961511	CACATAAAA
chr18	53984175	53984176	chr18:53984176:C:T	rs9947105	C	T	T	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr18	54023390	54023391	chr18:54023391:C:G	rs9304457	C	G	G	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr18	54386899	54386900	chr18:54386900:A:G	rs12458284	A	G	G	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr18	54465581	54465582	chr18:54465582:A:G	rs62091605	A	G	A	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr18	54727879	54727880	chr18:54727880:C:T	rs9807480	C	T	T	Hoxd9.mouse_homeodomain_1	0	1	-	7.9772278588234515	7.188342824966311	GCAATAAAA
chr18	54743245	54743246	chr18:54743246:A:G	rs1972598	A	G	A	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr18	55240588	55240589	chr18:55240589:A:C	rs1261073	A	C	C	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr18	55398847	55398848	chr18:55398848:T:A	rs1020169	T	A	T	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr18	55415742	55415743	chr18:55415743:C:T	rs2119292	C	T	T	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr18	55694567	55694568	chr18:55694568:G:A	rs543938175	G	A	G	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr18	55836488	55836489	chr18:55836489:T:G	rs57984515	T	G	T	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr18	56065113	56065114	chr18:56065114:A:G	rs6566443	A	G	G	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr18	56118440	56118441	chr18:56118441:A:G	rs1792692	A	G	A	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr18	56327832	56327833	chr18:56327833:T:A	rs17090145	T	A	T	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr18	56517469	56517470	chr18:56517470:A:C	chr18:56517470:A:C	A	C	A	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr18	56574792	56574793	chr18:56574793:A:G	rs602339	A	G	A	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr18	57114023	57114024	chr18:57114024:G:T	rs9956663	G	T	G	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr18	57161043	57161044	chr18:57161044:C:T	rs56154350	C	T	C	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr18	57225024	57225025	chr18:57225025:A:T	rs149574361	A	T	A	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr18	57250326	57250327	chr18:57250327:G:A	rs4801094	G	A	A	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr18	57287172	57287173	chr18:57287173:G:T	rs1548960	G	T	T	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr18	57306635	57306636	chr18:57306636:T:A	rs759554	T	A	A	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr18	57353445	57353446	chr18:57353446:T:G	rs10048396	T	G	G	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr18	57353469	57353470	chr18:57353470:G:A	rs34695623	G	A	G	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr18	57354150	57354151	chr18:57354151:C:G	rs9954520	C	G	C	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr18	57354356	57354357	chr18:57354357:C:T	rs75949411	C	T	C	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr18	57427071	57427072	chr18:57427072:T:C	rs115679799	T	C	T	Hoxd9.mouse_homeodomain_1	4	1	+	8.287463081002919	5.632416436140341	CCAATAAAA
chr18	57445566	57445567	chr18:57445567:T:C	rs879340020	T	C	T	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr18	57445576	57445577	chr18:57445577:G:C	rs485401	G	C	G	Hoxd9.mouse_homeodomain_1	2	1	-	8.027213970992095	4.559222313539767	CACATAAAA
chr18	57559825	57559826	chr18:57559826:C:G	rs1787997	C	G	G	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr18	57668007	57668008	chr18:57668008:A:G	rs4940499	A	G	A	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr18	57698129	57698130	chr18:57698130:G:A	rs319436	G	A	G	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr18	57744979	57744980	chr18:57744980:C:T	rs185698573	C	T	C	Hoxd9.mouse_homeodomain_1	2	1	+	8.027213970992095	1.5397735133684596	CACATAAAA
chr18	57839832	57839833	chr18:57839833:G:T	rs4084697	G	T	t	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr18	57863475	57863476	chr18:57863476:A:G	rs3859409	A	G	G	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr18	58116450	58116451	chr18:58116451:G:A	rs474743	G	A	A	Hoxd9.mouse_homeodomain_1	8	1	-	7.1462160923678635	5.746270592944195	GCCATAAAC
chr18	58126162	58126163	chr18:58126163:C:G	rs4941332	C	G	C	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr18	58160363	58160364	chr18:58160364:G:T	rs4941348	G	T	T	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr18	58197248	58197249	chr18:58197249:C:G	rs78475427	C	G	C	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr18	58197271	58197272	chr18:58197272:T:C	rs8091354	T	C	T	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr18	58269876	58269877	chr18:58269877:A:G	rs12608075	A	G	A	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr18	58444184	58444185	chr18:58444185:G:A	rs182527692	G	A	G	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr18	58444185	58444186	chr18:58444186:C:A	rs186811007	C	A	C	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr18	58453816	58453817	chr18:58453817:G:T	rs2277721	G	T	G	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr18	58481593	58481594	chr18:58481594:C:G	rs10867	C	G	C	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr18	58506197	58506198	chr18:58506198:G:A	rs13381396	G	A	G	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr18	58658186	58658187	chr18:58658187:G:C	rs114095712	G	C	G	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr18	58779669	58779670	chr18:58779670:A:G	rs7238068	A	G	G	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr18	58820542	58820543	chr18:58820543:C:G	rs7504653	C	G	G	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr18	59019876	59019877	chr18:59019877:T:G	rs17695139	T	G	T	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr18	59075905	59075906	chr18:59075906:A:G	rs12326997	A	G	G	Hoxd9.mouse_homeodomain_1	2	1	+	8.287463081002919	5.5210272824374	CCAATAAAA
chr18	59262887	59262888	chr18:59262888:T:C	rs2849388	T	C	C	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr18	59276579	59276580	chr18:59276580:C:G	rs633083	C	G	G	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr18	59414321	59414322	chr18:59414322:T:C	rs12956328	T	C	T	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr18	59414335	59414336	chr18:59414336:C:A	rs12970007	C	A	A	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr18	59509669	59509670	chr18:59509670:G:T	chr18:59509670:G:T	G	T	G	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr18	59509680	59509681	chr18:59509681:C:T	rs78404150	C	T	C	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr18	59509683	59509684	chr18:59509684:G:A	rs7243244	G	A	G	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr18	59521261	59521262	chr18:59521262:G:A	rs12966739	G	A	G	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr18	59549457	59549458	chr18:59549458:C:G	rs1944984	C	G	G	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr18	59576127	59576128	chr18:59576128:C:A	rs2851855	C	A	A	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr18	59623830	59623831	chr18:59623831:C:A	rs192251279	C	A	C	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr18	59644977	59644978	chr18:59644978:A:G	rs7236833	A	G	G	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr18	59749335	59749336	chr18:59749336:C:G	rs17771510	C	G	C	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr18	59901460	59901461	chr18:59901461:A:G	rs7240884	A	G	G	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr18	60066692	60066693	chr18:60066693:G:A	rs7228430	G	A	G	Hoxd9.mouse_homeodomain_1	1	1	-	7.889898683853121	6.575096769520114	ACCATAAAA
chr18	60460975	60460976	chr18:60460976:A:G	rs9954374	A	G	G	Hoxd9.mouse_homeodomain_1	4	1	-	7.889898683853121	5.234852038990543	ACCATAAAA
chr18	60544382	60544383	chr18:60544383:A:C	rs12960864	A	C	A	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr18	60717579	60717580	chr18:60717580:C:T	rs4940966	C	T	T	Hoxd9.mouse_homeodomain_1	0	1	-	7.9772278588234515	7.188342824966311	GCAATAAAA
chr18	60740000	60740001	chr18:60740001:A:C	rs1598435	A	C	C	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr18	60740001	60740002	chr18:60740002:C:T	rs1598434	C	T	T	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr18	60787499	60787500	chr18:60787500:A:G	rs12960855	A	G	G	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr18	60982561	60982562	chr18:60982562:G:A	rs181300960	G	A	G	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr18	61348391	61348392	chr18:61348392:T:C	rs10513876	T	C	T	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr18	61458432	61458433	chr18:61458433:C:A	rs139521057	C	A	C	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr18	61733277	61733278	chr18:61733278:C:T	rs10469240	C	T	c	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr18	61867924	61867925	chr18:61867925:C:T	rs4072460	C	T	C	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr18	61952124	61952125	chr18:61952125:A:G	rs10469244	A	G	A	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr18	62037401	62037402	chr18:62037402:C:T	rs76308616	C	T	C	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr18	62396990	62396991	chr18:62396991:T:G	rs2957134	T	G	T	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr18	62410162	62410163	chr18:62410163:G:C	rs3017351	G	C	G	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr18	62437000	62437001	chr18:62437001:G:A	rs56145860	G	A	A	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr18	62557045	62557046	chr18:62557046:T:A	rs2048793	T	A	T	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr18	62580144	62580145	chr18:62580145:T:C	rs10469139	T	C	T	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr18	62766310	62766311	chr18:62766311:C:T	rs79133895	C	T	C	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr18	62884390	62884391	chr18:62884391:C:A	rs12962309	C	A	C	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr18	62993988	62993989	chr18:62993989:C:A	rs572638	C	A	A	Hoxd9.mouse_homeodomain_1	8	1	-	7.522691831404475	6.056505815123662	CCCATAAAG
chr18	62993990	62993991	chr18:62993991:T:A	rs72947642	T	A	T	Hoxd9.mouse_homeodomain_1	6	1	-	7.522691831404475	4.633276061373889	CCCATAAAG
chr18	62993994	62993995	chr18:62993995:G:A	rs572631	G	A	G	Hoxd9.mouse_homeodomain_1	2	1	-	7.522691831404475	1.0352513737808375	CCCATAAAG
chr18	63071384	63071385	chr18:63071385:T:C	rs7243184	T	C	C	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr18	63150472	63150473	chr18:63150473:G:A	rs11876772	G	A	A	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr18	63159109	63159110	chr18:63159110:G:A	rs4940572	G	A	A	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr18	63217314	63217315	chr18:63217315:T:A	rs77612450	T	A	T	Hoxd9.mouse_homeodomain_1	4	1	+	8.287463081002919	1.445644633672313	CCAATAAAA
chr18	63237121	63237122	chr18:63237122:C:T	rs4987770	C	T	C	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr18	63413131	63413132	chr18:63413132:A:G	rs4530253	A	G	G	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr18	63433301	63433302	chr18:63433302:A:G	rs1355195	A	G	A	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr18	63472400	63472401	chr18:63472401:T:C	rs10871801	T	C	T	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr18	63875756	63875757	chr18:63875757:A:C	rs28863338	A	C	-	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr18	63910056	63910057	chr18:63910057:A:G	rs9966367	A	G	A	Hoxd9.mouse_homeodomain_1	4	1	-	7.1462160923678635	4.491169447505284	GCCATAAAC
chr18	63913593	63913594	chr18:63913594:G:A	rs8086048	G	A	G	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr18	63924807	63924808	chr18:63924808:A:G	rs73961817	A	G	A	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr18	63953839	63953840	chr18:63953840:C:T	rs80049715	C	T	T	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr18	64035625	64035626	chr18:64035626:A:G	rs9949510	A	G	A	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr18	64179692	64179693	chr18:64179693:C:T	rs12959872	C	T	C	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr18	64404452	64404453	chr18:64404453:T:C	rs55993352	T	C	T	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr18	64437415	64437416	chr18:64437416:A:G	rs557097358	A	G	A	Hoxd9.mouse_homeodomain_1	7	1	+	7.716978748812629	1.0131528022208975	GACATAAAA
chr18	64708251	64708252	chr18:64708252:T:A	rs12326085	T	A	T	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr18	65498566	65498567	chr18:65498567:G:T	rs12970791	G	T	G	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr18	65698450	65698451	chr18:65698451:T:C	rs1942269	T	C	C	Hoxd9.mouse_homeodomain_1	1	1	-	7.716978748812629	2.2692504889278973	GACATAAAA
chr18	65955851	65955852	chr18:65955852:G:A	rs72939541	G	A	G	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr18	66151922	66151923	chr18:66151923:T:C	rs17075958	T	C	T	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr18	66640794	66640795	chr18:66640795:G:A	rs11151287	G	A	G	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr18	66667665	66667666	chr18:66667666:A:G	rs2040214	A	G	A	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr18	66678922	66678923	chr18:66678923:C:T	rs76984793	C	T	C	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr18	66772962	66772963	chr18:66772963:C:G	rs8091642	C	G	G	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr18	66830692	66830693	chr18:66830693:A:C	rs12956901	A	C	A	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr18	66967439	66967440	chr18:66967440:C:T	rs714600	C	T	T	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr18	67069421	67069422	chr18:67069422:G:A	rs4130386	G	A	G	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr18	67133807	67133808	chr18:67133808:C:T	rs4395181	C	T	C	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr18	67279165	67279166	chr18:67279166:T:A	rs716669	T	A	A	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr18	67371659	67371660	chr18:67371660:G:T	rs4510133	G	T	G	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr18	67456045	67456046	chr18:67456046:T:C	rs4362480	T	C	C	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr18	67468290	67468291	chr18:67468291:A:G	rs9955889	A	G	G	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr18	67621154	67621155	chr18:67621155:A:G	rs894909	A	G	A	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr18	67635263	67635264	chr18:67635264:C:A	rs12958645	C	A	C	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr18	67864907	67864908	chr18:67864908:A:G	rs62091627	A	G	A	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr18	68132595	68132596	chr18:68132596:A:G	rs9944822	A	G	G	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr18	68185785	68185786	chr18:68185786:T:G	rs9958506	T	G	T	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr18	68361501	68361502	chr18:68361502:A:G	rs1117240	A	G	A	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr18	68409841	68409842	chr18:68409842:T:C	rs17212313	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.027213970992095	6.693135371129603	CACATAAAA
chr18	68543151	68543152	chr18:68543152:A:G	rs574539	A	G	A	Hoxd9.mouse_homeodomain_1	6	1	+	8.027213970992095	1.3233880244003648	CACATAAAA
chr18	68623465	68623466	chr18:68623466:G:A	rs967969	G	A	A	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr18	68714656	68714657	chr18:68714657:G:A	rs9960027	G	A	g	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr18	68715826	68715827	chr18:68715827:C:G	rs309247	C	G	C	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr18	68803924	68803925	chr18:68803925:T:G	rs138021073	T	G	T	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr18	68838188	68838189	chr18:68838189:G:A	rs695141	G	A	G	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr18	69526216	69526217	chr18:69526217:G:C	rs9950126	G	C	C	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr18	69622225	69622226	chr18:69622226:G:T	rs7230078	G	T	T	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr18	69622247	69622248	chr18:69622248:A:T	rs73459963	A	T	A	Hoxd9.mouse_homeodomain_1	5	1	+	7.522691831404475	6.943160709270972	CCCATAAAG
chr18	69640087	69640088	chr18:69640088:G:A	rs9953464	G	A	G	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr18	69756604	69756605	chr18:69756605:T:C	rs7243586	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.027213970992095	6.693135371129603	CACATAAAA
chr18	69758744	69758745	chr18:69758745:A:G	rs73970258	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.287463081002919	6.953384481140425	CCAATAAAA
chr18	69788502	69788503	chr18:69788503:T:G	rs12605097	T	G	T	Hoxd9.mouse_homeodomain_1	4	1	+	8.027213970992095	1.1853955236614904	CACATAAAA
chr18	70496847	70496848	chr18:70496848:T:G	rs80060413	T	G	T	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr18	70623142	70623143	chr18:70623143:G:A	rs17082921	G	A	G	Hoxd9.mouse_homeodomain_1	1	1	-	8.678783717710262	7.363981803377255	GCCATAAAA
chr18	70669725	70669726	chr18:70669726:T:A	rs11151607	T	A	A	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr18	71083458	71083459	chr18:71083459:T:A	rs73473168	T	A	T	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr18	71083466	71083467	chr18:71083467:G:A	rs112373764	G	A	A	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr18	71210362	71210363	chr18:71210363:T:G	rs9948394	T	G	T	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr18	71505702	71505703	chr18:71505703:T:C	rs7239293	T	C	C	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr18	71761702	71761703	chr18:71761703:T:A	rs4891945	T	A	T	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr18	72010013	72010014	chr18:72010014:G:A	rs74828450	G	A	G	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr18	72742353	72742354	chr18:72742354:T:C	rs9950516	T	C	N	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr18	72742354	72742355	chr18:72742355:G:C	rs11663933	G	C	G	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr18	72866740	72866741	chr18:72866741:C:A	rs8085896	C	A	C	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr18	72870578	72870579	chr18:72870579:A:G	rs2156102	A	G	G	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr18	73094014	73094015	chr18:73094015:A:G	rs80243573	A	G	A	Hoxd9.mouse_homeodomain_1	4	1	-	8.98901893988973	6.333972295027152	CCCATAAAA
chr18	73283876	73283877	chr18:73283877:A:C	rs79675858	A	C	A	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr18	73283878	73283879	chr18:73283879:T:C	rs4619489	T	C	C	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr18	73381862	73381863	chr18:73381863:C:G	rs34368689	C	G	C	Hoxd9.mouse_homeodomain_1	0	1	-	7.9772278588234515	8.287463081002919	GCAATAAAA
chr18	73517488	73517489	chr18:73517489:C:T	rs9962517	C	T	C	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr18	73517489	73517490	chr18:73517490:G:A	rs377555449	G	A	G	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr18	73619958	73619959	chr18:73619959:A:G	rs1943865	A	G	G	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr18	73670971	73670972	chr18:73670972:G:A	rs188818413	G	A	G	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr18	73839567	73839568	chr18:73839568:G:A	rs72980567	G	A	G	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr18	73975616	73975617	chr18:73975617:A:C	rs9957768	A	C	A	Hoxd9.mouse_homeodomain_1	6	1	+	7.522691831404475	5.775608016563663	CCCATAAAG
chr18	73981827	73981828	chr18:73981828:G:T	rs1943925	G	T	a	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr18	74189081	74189082	chr18:74189082:G:A	rs1790877	G	A	G	Hoxd9.mouse_homeodomain_1	2	1	-	7.889898683853121	1.4024582262294842	ACCATAAAA
chr18	74241550	74241551	chr18:74241551:C:T	rs1790886	C	T	C	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr18	74241564	74241565	chr18:74241565:T:C	rs1024906	T	C	T	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr18	74269228	74269229	chr18:74269229:G:A	rs7239151	G	A	G	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr18	74292412	74292413	chr18:74292413:A:G	rs192580536	A	G	A	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr18	74292433	74292434	chr18:74292434:A:G	chr18:74292434:A:G	A	G	a	Hoxd9.mouse_homeodomain_1	3	1	+	7.522691831404475	6.188613231541982	CCCATAAAG
chr18	74295366	74295367	chr18:74295367:C:A	rs1790843	C	A	C	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr18	74381676	74381677	chr18:74381677:C:T	rs8091329	C	T	T	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr18	74497961	74497962	chr18:74497962:G:A	rs140699832	G	A	G	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr18	74540824	74540825	chr18:74540825:G:A	rs8085167	G	A	G	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr18	74540828	74540829	chr18:74540829:A:C	rs17238285	A	C	C	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr18	74574456	74574457	chr18:74574457:T:C	rs12456406	T	C	C	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr18	74724663	74724664	chr18:74724664:A:G	rs56407596	A	G	A	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr18	75054889	75054890	chr18:75054890:C:T	rs76008718	C	T	C	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr18	75207361	75207362	chr18:75207362:A:G	rs73478102	A	G	A	Hoxd9.mouse_homeodomain_1	6	1	+	7.075409217893736	0.37158327130200364	CCCGTTAAA
chr18	75475506	75475507	chr18:75475507:C:T	rs17057114	C	T	C	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr18	75993525	75993526	chr18:75993526:C:T	rs17058687	C	T	C	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr18	76006166	76006167	chr18:76006167:C:T	rs4891005	C	T	T	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr18	76102216	76102217	chr18:76102217:A:G	rs73482826	A	G	A	Hoxd9.mouse_homeodomain_1	5	1	+	7.241935125048919	0.867745406802363	CCCATACAA
chr18	76102784	76102785	chr18:76102785:G:A	rs4891008	G	A	G	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr18	76445111	76445112	chr18:76445112:C:T	rs2848958	C	T	C	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr18	76602462	76602463	chr18:76602463:G:A	rs9950367	G	A	a	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr18	76687856	76687857	chr18:76687857:G:A	rs72975306	G	A	G	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr18	76691864	76691865	chr18:76691865:C:G	rs7241906	C	G	C	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr18	76721264	76721265	chr18:76721265:C:T	rs117204231	C	T	C	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr18	76721272	76721273	chr18:76721273:G:A	rs8099813	G	A	A	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr18	76741461	76741462	chr18:76741462:A:G	rs4243291	A	G	G	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr18	76806994	76806995	chr18:76806995:C:T	rs4552096	C	T	T	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr18	76944446	76944447	chr18:76944447:A:T	rs470198	A	T	A	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr18	77060283	77060284	chr18:77060284:C:A	rs685975	C	A	C	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr18	77078504	77078505	chr18:77078505:C:T	rs11664836	C	T	C	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr18	77084034	77084035	chr18:77084035:C:T	rs4890795	C	T	C	Hoxd9.mouse_homeodomain_1	8	1	+	7.45645131454733	6.056505815123662	CCCATAAAC
chr18	77096217	77096218	chr18:77096218:T:C	rs114479807	T	C	T	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr18	77108959	77108960	chr18:77108960:T:C	rs8083056	T	C	T	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr18	77126702	77126703	chr18:77126703:C:T	rs1789079	C	T	T	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr18	77272941	77272942	chr18:77272942:T:C	rs71362711	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.091711387329735	5.757632787467242	CCCATCAAA
chr18	77374309	77374310	chr18:77374310:C:T	rs35500429	C	T	C	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr18	77452257	77452258	chr18:77452258:T:G	rs948717	T	G	T	Hoxd9.mouse_homeodomain_1	7	1	-	7.889898683853121	5.000482913822536	ACCATAAAA
chr18	77655751	77655752	chr18:77655752:G:C	chr18:77655752:G:C	G	C	G	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr18	78207723	78207724	chr18:78207724:A:G	rs145599695	A	G	A	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr18	78231635	78231636	chr18:78231636:C:G	rs2174448	C	G	C	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr18	78354307	78354308	chr18:78354308:G:T	rs80303090	G	T	G	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr18	78401246	78401247	chr18:78401247:A:G	rs628119	A	G	A	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr18	78448256	78448257	chr18:78448257:G:A	rs55965232	G	A	G	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr18	78448271	78448272	chr18:78448272:G:A	rs142987030	G	A	G	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr18	78501024	78501025	chr18:78501025:T:C	rs714105	T	C	C	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr18	78606850	78606851	chr18:78606851:C:A	rs111211760	C	A	A	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr18	79306146	79306147	chr18:79306147:T:C	rs76130187	T	C	T	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr18	79401670	79401671	chr18:79401671:C:G	rs643705	C	G	C	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr18	79405796	79405797	chr18:79405797:C:T	rs149369389	C	T	C	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr18	79484327	79484328	chr18:79484328:C:A	rs117883570	C	A	C	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr18	79489830	79489831	chr18:79489831:T:C	rs416522	T	C	C	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr18	79503877	79503878	chr18:79503878:A:G	rs9962730	A	G	a	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr18	79508412	79508413	chr18:79508413:G:A	rs78496390	G	A	G	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr18	79516963	79516964	chr18:79516964:A:G	rs177820	A	G	A	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr18	79677992	79677993	chr18:79677993:A:G	rs680014	A	G	G	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr18	79872193	79872194	chr18:79872194:G:A	rs72980087	G	A	G	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr18	79903722	79903723	chr18:79903723:T:C	rs552136493	T	C	T	Hoxd9.mouse_homeodomain_1	5	1	-	7.716978748812629	1.3427890305660735	GACATAAAA
chr18	79940037	79940038	chr18:79940038:C:T	rs9950305	C	T	T	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr18	79965698	79965699	chr18:79965699:A:G	rs1430597	A	G	G	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr18	80208804	80208805	chr18:80208805:G:A	rs35079503	G	A	G	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr18	80241088	80241089	chr18:80241089:A:G	rs67693980	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.98901893988973	7.654940340027237	CCCATAAAA
chr19	226775	226776	chr19:226776:C:T	rs3873005	C	T	.	Hoxd9.mouse_homeodomain_1	1	1	+	6.781476165150267	5.46667425081726	GCCATCAAA
chr19	313301	313302	chr19:313302:T:A	rs72984430	T	A	T	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr19	349887	349888	chr19:349888:A:G	rs8105194	A	G	A	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr19	487374	487375	chr19:487375:A:C	rs8108503	A	C	A	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr19	623998	623999	chr19:623999:A:G	rs192288714	A	G	A	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr19	624089	624090	chr19:624090:T:C	rs8102843	T	C	T	Hoxd9.mouse_homeodomain_1	4	1	+	7.45645131454733	4.801404669684752	CCCATAAAC
chr19	689003	689004	chr19:689004:G:T	rs12609586	G	T	G	Hoxd9.mouse_homeodomain_1	0	1	+	7.212456609225008	5.628144526095533	GCCATAAAG
chr19	859646	859647	chr19:859647:A:G	rs370546435	A	G	A	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr19	911452	911453	chr19:911453:A:C	rs1982772	A	C	-	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr19	921501	921502	chr19:921502:T:G	rs73507533	T	G	G	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr19	928295	928296	chr19:928296:C:T	rs559212400	C	T	C	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr19	935457	935458	chr19:935458:C:T	rs112201952	C	T	C	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr19	937494	937495	chr19:937495:T:C	rs116049080	T	C	T	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr19	937522	937523	chr19:937523:G:A	rs114900453	G	A	G	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr19	955281	955282	chr19:955282:G:A	rs548928025	G	A	G	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr19	1375355	1375356	chr19:1375356:C:G	rs4011457	C	G	c	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr19	1415337	1415338	chr19:1415338:G:A	rs1282436201	G	A	G	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr19	1415352	1415353	chr19:1415353:A:G	rs3065740	A	G	G	Hoxd9.mouse_homeodomain_1	4	1	-	8.027213970992095	5.372167326129518	CACATAAAA
chr19	1452522	1452523	chr19:1452523:C:A	rs11671418	C	A	C	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr19	1524064	1524065	chr19:1524065:T:C	rs532342113	T	C	t	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr19	1524065	1524066	chr19:1524066:C:G	rs2277751	C	G	c	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr19	1744226	1744227	chr19:1744227:A:G	rs11671278	A	G	G	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr19	1780574	1780575	chr19:1780575:C:A	rs7246708	C	A	A	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr19	1849147	1849148	chr19:1849148:A:G	rs35917007	A	G	A	Hoxd9.mouse_homeodomain_1	4	1	-	6.943160709270972	4.288114064408394	CCCATTAAG
chr19	2021909	2021910	chr19:2021910:G:A	rs6510636	G	A	g	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr19	2067687	2067688	chr19:2067688:G:C	rs117593268	G	C	g	Hoxd9.mouse_homeodomain_1	0	1	-	8.98901893988973	8.678783717710262	CCCATAAAA
chr19	2154902	2154903	chr19:2154903:G:T	chr19:2154903:G:T	G	T	G	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr19	2362482	2362483	chr19:2362483:G:C	rs1220561223	G	C	G	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr19	2399260	2399261	chr19:2399261:C:T	rs79824768	C	T	c	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr19	2417050	2417051	chr19:2417051:T:C	rs545212904	T	C	T	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr19	2534481	2534482	chr19:2534482:C:T	rs35730496	C	T	C	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr19	2555080	2555081	chr19:2555081:C:T	rs114661950	C	T	C	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr19	2607639	2607640	chr19:2607640:A:G	rs8113429	A	G	A	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr19	2631663	2631664	chr19:2631664:G:A	chr19:2631664:G:A	G	A	G	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr19	2923678	2923679	chr19:2923679:A:T	rs79494490	A	T	a	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr19	2951311	2951312	chr19:2951312:A:G	rs12978677	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.027213970992095	6.693135371129603	CACATAAAA
chr19	3085047	3085048	chr19:3085048:C:T	rs12979014	C	T	-	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr19	3112024	3112025	chr19:3112025:A:G	rs308063	A	G	A	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr19	3185707	3185708	chr19:3185708:G:T	rs1037018611	G	T	G	Hoxd9.mouse_homeodomain_1	1	1	-	7.9772278588234515	7.0154228899258175	GCAATAAAA
chr19	3237393	3237394	chr19:3237394:G:A	rs8103081	G	A	-	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr19	3450895	3450896	chr19:3450896:G:A	rs188444715	G	A	G	Hoxd9.mouse_homeodomain_1	1	1	-	8.287463081002919	6.972661166669912	CCAATAAAA
chr19	3607947	3607948	chr19:3607948:A:G	rs78997182	A	G	A	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr19	3653104	3653105	chr19:3653105:A:G	rs2074956	A	G	G	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr19	3976312	3976313	chr19:3976313:G:A	rs541048108	G	A	G	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr19	3976322	3976323	chr19:3976323:T:G	rs3170368	T	G	G	Hoxd9.mouse_homeodomain_1	4	1	+	6.943160709270972	0.10134226194036705	CCCATTAAG
chr19	4059909	4059910	chr19:4059910:C:A	rs537006455	C	A	C	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr19	4211197	4211198	chr19:4211198:T:C	rs62129276	T	C	T	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr19	4403800	4403801	chr19:4403801:T:C	rs8103986	T	C	T	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr19	4403802	4403803	chr19:4403803:T:C	rs243340	T	C	T	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr19	4554570	4554571	chr19:4554571:A:C	rs1610094	A	C	c	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr19	4636085	4636086	chr19:4636086:A:G	rs12980361	A	G	G	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr19	4647045	4647046	chr19:4647046:G:A	rs118101039	G	A	G	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr19	4724508	4724509	chr19:4724509:T:G	rs139719395	T	G	T	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr19	4933764	4933765	chr19:4933765:G:A	rs8107449	G	A	T	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr19	5114862	5114863	chr19:5114863:C:T	rs147191287	C	T	C	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr19	5155917	5155918	chr19:5155918:A:G	rs114972319	A	G	A	Hoxd9.mouse_homeodomain_1	4	1	-	7.522691831404475	4.867645186541897	CCCATAAAG
chr19	5281138	5281139	chr19:5281139:G:T	rs73547741	G	T	G	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr19	5319869	5319870	chr19:5319870:C:T	rs77440484	C	T	C	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr19	5352644	5352645	chr19:5352645:G:C	rs17608346	G	C	G	Hoxd9.mouse_homeodomain_1	1	1	-	6.943160709270972	0.5336274804886076	CCCATTAAG
chr19	5470625	5470626	chr19:5470626:T:G	rs415427	T	G	G	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr19	5954150	5954151	chr19:5954151:A:C	rs4807826	A	C	C	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr19	6043584	6043585	chr19:6043585:T:G	rs182794516	T	G	T	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr19	6088897	6088898	chr19:6088898:C:A	chr19:6088898:C:A	C	A	C	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr19	6126786	6126787	chr19:6126787:A:G	rs4439887	A	G	G	Hoxd9.mouse_homeodomain_1	4	1	-	8.98901893988973	6.333972295027152	CCCATAAAA
chr19	6126806	6126807	chr19:6126807:G:A	rs11673527	G	A	A	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr19	6160510	6160511	chr19:6160511:G:T	rs79864873	G	T	G	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr19	6183221	6183222	chr19:6183222:G:A	rs17851957	G	A	A	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr19	6186336	6186337	chr19:6186337:G:A	rs61222543	G	A	G	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr19	6280461	6280462	chr19:6280462:C:A	rs74854578	C	A	C	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr19	6286577	6286578	chr19:6286578:C:T	rs7251005	C	T	C	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr19	6291950	6291951	chr19:6291951:C:T	rs8104293	C	T	C	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr19	6315823	6315824	chr19:6315824:A:C	rs77101163	A	C	A	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr19	6464084	6464085	chr19:6464085:C:T	rs183049266	C	T	C	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr19	6464090	6464091	chr19:6464091:C:T	rs150747796	C	T	C	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr19	6610353	6610354	chr19:6610354:T:C	rs4807089	T	C	t	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr19	6615995	6615996	chr19:6615996:A:G	rs12977103	A	G	A	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr19	6623038	6623039	chr19:6623039:G:T	rs389971	G	T	G	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr19	6680498	6680499	chr19:6680499:C:T	rs11569557	C	T	C	Hoxd9.mouse_homeodomain_1	2	1	+	8.98901893988973	2.5015784822660927	CCCATAAAA
chr19	6723268	6723269	chr19:6723269:C:G	rs149859333	C	G	C	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr19	6737064	6737065	chr19:6737065:C:A	rs187223810	C	A	C	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr19	6737092	6737093	chr19:6737093:G:A	rs111798663	G	A	G	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr19	6832956	6832957	chr19:6832957:C:T	rs74528415	C	T	C	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr19	6984915	6984916	chr19:6984916:T:C	rs34752448	T	C	C	Hoxd9.mouse_homeodomain_1	8	1	-	7.9772278588234515	6.510900750338196	GCAATAAAA
chr19	7186562	7186563	chr19:7186563:G:A	rs112819336	G	A	G	Hoxd9.mouse_homeodomain_1	0	1	-	8.027213970992095	6.132666665683155	CACATAAAA
chr19	7189552	7189553	chr19:7189553:T:A	rs57274677	T	A	T	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr19	7229621	7229622	chr19:7229622:G:C	rs142788290	G	C	G	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr19	7234563	7234564	chr19:7234564:A:G	rs10420008	A	G	A	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr19	7251576	7251577	chr19:7251577:A:T	rs10415205	A	T	A	Hoxd9.mouse_homeodomain_1	5	1	-	8.409487817756228	8.98901893988973	CCCATTAAA
chr19	7287999	7288000	chr19:7288000:G:A	rs8111943	G	A	G	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr19	7605947	7605948	chr19:7605948:C:G	chr19:7605948:C:G	C	G	C	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr19	7674174	7674175	chr19:7674175:T:C	rs79584858	T	C	T	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr19	7699877	7699878	chr19:7699878:C:G	rs112897528	C	G	N	Hoxd9.mouse_homeodomain_1	1	1	+	6.781476165150267	0.371942936367902	GCCATCAAA
chr19	7699885	7699886	chr19:7699886:T:C	rs2287868	T	C	N	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr19	7751253	7751254	chr19:7751254:A:C	rs144085356	A	C	a	Hoxd9.mouse_homeodomain_1	4	1	-	8.409487817756228	1.5676693704256222	CCCATTAAA
chr19	7829443	7829444	chr19:7829444:A:C	chr19:7829444:A:C	A	C	A	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr19	7829754	7829755	chr19:7829755:C:G	rs151063055	C	G	C	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr19	7829761	7829762	chr19:7829762:T:C	rs530922550	T	C	T	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr19	7961664	7961665	chr19:7961665:A:G	rs12985234	A	G	G	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr19	7972124	7972125	chr19:7972125:C:T	rs56204704	C	T	C	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr19	7995535	7995536	chr19:7995536:T:C	rs1204494	T	C	C	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr19	8196771	8196772	chr19:8196772:C:T	rs7249838	C	T	C	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr19	8311546	8311547	chr19:8311547:G:A	rs561	G	A	G	Hoxd9.mouse_homeodomain_1	2	1	-	7.522691831404475	1.0352513737808375	CCCATAAAG
chr19	8384825	8384826	chr19:8384826:C:T	rs11671075	C	T	C	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr19	8468619	8468620	chr19:8468620:T:C	rs7258281	T	C	C	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr19	8468624	8468625	chr19:8468625:C:T	rs59319088	C	T	C	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr19	8514487	8514488	chr19:8514488:C:T	rs6603086	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	-	8.099252595576761	7.3103675617196195	GCCATTAAA
chr19	8648364	8648365	chr19:8648365:A:G	rs2967721	A	G	A	Hoxd9.mouse_homeodomain_1	5	1	-	8.409487817756228	7.091711387329735	CCCATTAAA
chr19	9820078	9820079	chr19:9820079:G:C	rs974252195	G	C	G	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr19	10219652	10219653	chr19:10219653:C:T	rs73015114	C	T	T	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr19	10379725	10379726	chr19:10379726:A:G	rs280500	A	G	A	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr19	10510531	10510532	chr19:10510532:G:C	rs10409101	G	C	G	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr19	11143685	11143686	chr19:11143686:C:T	rs372825301	C	T	C	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr19	11143723	11143724	chr19:11143724:G:A	rs186375632	G	A	G	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr19	11373458	11373459	chr19:11373459:G:A	rs1398165495	G	A	G	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr19	11483229	11483230	chr19:11483230:T:C	rs11878849	T	C	T	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr19	11597937	11597938	chr19:11597938:C:T	rs143969094	C	T	C	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr19	11622379	11622380	chr19:11622380:A:C	rs35085568	A	C	A	Hoxd9.mouse_homeodomain_1	4	1	-	8.98901893988973	2.147200492559124	CCCATAAAA
chr19	11658828	11658829	chr19:11658829:T:C	rs6511743	T	C	C	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr19	11857001	11857002	chr19:11857002:A:C	rs279207	A	C	a	Hoxd9.mouse_homeodomain_1	4	1	-	6.876920192413827	0.03510174508322228	CCCATTAAC
chr19	11861830	11861831	chr19:11861831:A:T	rs72994210	A	T	A	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr19	11978733	11978734	chr19:11978734:T:C	rs7254258	T	C	C	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr19	11978893	11978894	chr19:11978894:T:C	rs7254529	T	C	C	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr19	11978927	11978928	chr19:11978928:C:T	rs7250795	C	T	c	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr19	12330429	12330430	chr19:12330430:C:T	rs9676962	C	T	C	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr19	12332595	12332596	chr19:12332596:T:C	rs563492651	T	C	T	Hoxd9.mouse_homeodomain_1	7	1	-	7.212456609225008	0.5086306626332764	GCCATAAAG
chr19	12507884	12507885	chr19:12507885:A:G	rs7255217	A	G	G	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr19	12603915	12603916	chr19:12603916:T:G	chr19:12603916:T:G	T	G	T	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr19	12641358	12641359	chr19:12641359:C:T	rs8112964	C	T	C	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr19	12779780	12779781	chr19:12779781:G:C	rs79814575	G	C	G	Hoxd9.mouse_homeodomain_1	1	1	-	7.091711387329735	0.6821781585473693	CCCATCAAA
chr19	12786884	12786885	chr19:12786885:C:T	rs187687247	C	T	C	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr19	12793625	12793626	chr19:12793626:A:G	rs10409385	A	G	A	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr19	12793657	12793658	chr19:12793658:T:A	rs374167067	T	A	T	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr19	13116811	13116812	chr19:13116812:A:T	rs2286436	A	T	a	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr19	13151500	13151501	chr19:13151501:T:C	rs185624425	T	C	T	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr19	13151507	13151508	chr19:13151508:A:G	rs1469692	A	G	G	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr19	13261030	13261031	chr19:13261031:G:A	rs59926814	G	A	G	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr19	13345536	13345537	chr19:13345537:C:A	rs11879807	C	A	A	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr19	13345553	13345554	chr19:13345554:T:C	rs10424440	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.889898683853121	6.555820083990628	ACCATAAAA
chr19	13347557	13347558	chr19:13347558:C:T	rs13382150	C	T	C	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr19	13459271	13459272	chr19:13459272:T:C	rs28419740	T	C	T	Hoxd9.mouse_homeodomain_1	4	1	+	7.889898683853121	5.234852038990543	ACCATAAAA
chr19	13773840	13773841	chr19:13773841:G:A	rs1128028	G	A	A	Hoxd9.mouse_homeodomain_1	1	1	-	8.287463081002919	6.972661166669912	CCAATAAAA
chr19	13774209	13774210	chr19:13774210:T:C	rs1044747	T	C	T	Hoxd9.mouse_homeodomain_1	1	1	-	8.027213970992095	2.5794857111073646	CACATAAAA
chr19	13861404	13861405	chr19:13861405:C:T	rs116874430	C	T	C	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr19	13951816	13951817	chr19:13951817:A:C	chr19:13951817:A:C	A	C	A	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr19	14266133	14266134	chr19:14266134:A:C	rs540723599	A	C	a	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr19	14305980	14305981	chr19:14305981:T:C	rs888876	T	C	C	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr19	14566499	14566500	chr19:14566500:A:G	rs3752221	A	G	.	Hoxd9.mouse_homeodomain_1	6	1	+	7.091711387329735	0.38788544073800313	CCCATCAAA
chr19	14640923	14640924	chr19:14640924:A:T	rs8113670	A	T	.	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr19	14888551	14888552	chr19:14888552:T:G	rs10402978	T	G	t	Hoxd9.mouse_homeodomain_1	7	1	-	8.287463081002919	5.398047310972334	CCAATAAAA
chr19	15150011	15150012	chr19:15150012:G:C	rs56248468	G	C	G	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr19	15297532	15297533	chr19:15297533:C:T	rs117438644	C	T	C	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr19	15299348	15299349	chr19:15299349:A:G	rs34636049	A	G	A	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr19	15394094	15394095	chr19:15394095:T:C	rs80209438	T	C	T	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr19	15607932	15607933	chr19:15607933:C:T	rs145272395	C	T	C	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr19	15628684	15628685	chr19:15628685:C:T	rs554734779	C	T	c	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr19	15702106	15702107	chr19:15702107:T:A	rs10414557	T	A	-	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr19	15728554	15728555	chr19:15728555:C:T	rs1806931	C	T	-	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr19	15810522	15810523	chr19:15810523:C:T	rs143584327	C	T	C	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr19	15837374	15837375	chr19:15837375:C:T	rs138194013	C	T	C	Hoxd9.mouse_homeodomain_1	2	1	+	7.212456609225008	0.7250161516013711	GCCATAAAG
chr19	15869637	15869638	chr19:15869638:G:A	rs62106157	G	A	-	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr19	15869681	15869682	chr19:15869682:T:G	rs62106158	T	G	-	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr19	16069728	16069729	chr19:16069729:A:T	rs67269649	A	T	T	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr19	16250003	16250004	chr19:16250004:G:A	rs12610575	G	A	G	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr19	16303929	16303930	chr19:16303930:C:T	chr19:16303930:C:T	C	T	C	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr19	16334403	16334404	chr19:16334404:T:C	rs55947223	T	C	T	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr19	16368848	16368849	chr19:16368849:C:T	rs10421252	C	T	C	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr19	16368865	16368866	chr19:16368866:T:C	rs117412491	T	C	T	Hoxd9.mouse_homeodomain_1	4	1	+	7.241935125048919	4.5868884801863405	CCCATACAA
chr19	16382028	16382029	chr19:16382029:C:A	rs146271245	C	A	C	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr19	16382042	16382043	chr19:16382043:G:A	rs899819233	G	A	G	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr19	17062059	17062060	chr19:17062060:T:C	rs78134142	T	C	T	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr19	17184059	17184060	chr19:17184060:G:A	rs73012519	G	A	G	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr19	17370110	17370111	chr19:17370111:A:C	chr19:17370111:A:C	A	C	a	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr19	17591143	17591144	chr19:17591144:C:T	rs67113289	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	+	8.287463081002919	6.392915775693977	CCAATAAAA
chr19	17718907	17718908	chr19:17718908:A:G	rs10405032	A	G	G	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr19	17791398	17791399	chr19:17791399:G:C	rs16995469	G	C	G	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr19	18012240	18012241	chr19:18012241:G:C	rs73512449	G	C	G	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr19	18053832	18053833	chr19:18053833:T:C	rs4808741	T	C	T	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr19	18053846	18053847	chr19:18053847:A:G	rs10424168	A	G	A	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr19	18061075	18061076	chr19:18061076:A:G	rs383483	A	G	G	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr19	18194374	18194375	chr19:18194375:T:A	rs62120372	T	A	T	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr19	18417313	18417314	chr19:18417314:G:A	rs753823193	G	A	G	Hoxd9.mouse_homeodomain_1	0	1	-	8.409487817756228	6.514940512447287	CCCATTAAA
chr19	18417333	18417334	chr19:18417334:C:A	rs79121331	C	A	C	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr19	18419047	18419048	chr19:18419048:A:G	rs564452095	A	G	A	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr19	18875835	18875836	chr19:18875836:T:C	rs73923175	T	C	t	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr19	19401847	19401848	chr19:19401848:A:T	rs10408596	A	T	A	Hoxd9.mouse_homeodomain_1	8	1	+	8.678783717710262	5.746270592944195	GCCATAAAA
chr19	19461298	19461299	chr19:19461299:T:G	rs4808959	T	G	G	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr19	19463354	19463355	chr19:19463355:G:A	rs118029519	G	A	G	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr19	19532133	19532134	chr19:19532134:C:T	rs113858307	C	T	C	Hoxd9.mouse_homeodomain_1	1	1	+	6.781476165150267	5.46667425081726	GCCATCAAA
chr19	19578664	19578665	chr19:19578665:C:T	rs16996166	C	T	C	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr19	19714622	19714623	chr19:19714623:C:T	rs112215404	C	T	c	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr19	19817347	19817348	chr19:19817348:A:C	rs937721150	A	C	a	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr19	19961986	19961987	chr19:19961987:G:T	rs112010815	G	T	t	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr19	19977229	19977230	chr19:19977230:C:T	rs11672275	C	T	t	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr19	19977230	19977231	chr19:19977231:C:T	rs11672276	C	T	t	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr19	20079523	20079524	chr19:20079524:G:T	rs201879295	G	T	g	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr19	20079528	20079529	chr19:20079529:A:G	rs59445264	A	G	a	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr19	20082747	20082748	chr19:20082748:C:T	rs1230351	C	T	c	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr19	20182341	20182342	chr19:20182342:C:T	rs118141103	C	T	.	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr19	20513823	20513824	chr19:20513824:C:T	rs2562678	C	T	.	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr19	20562854	20562855	chr19:20562855:C:T	rs2336349	C	T	.	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr19	20568597	20568598	chr19:20568598:G:T	rs10404428	G	T	.	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr19	20776823	20776824	chr19:20776824:A:C	rs75584677	A	C	A	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr19	20776839	20776840	chr19:20776840:C:T	rs73543372	C	T	C	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr19	20776843	20776844	chr19:20776844:G:A	rs926235811	G	A	G	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr19	20937704	20937705	chr19:20937705:A:G	rs187569094	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	7.1462160923678635	5.81213749250537	GCCATAAAC
chr19	21147032	21147033	chr19:21147033:T:C	rs7250987	T	C	C	Hoxd9.mouse_homeodomain_1	1	1	-	8.027213970992095	2.5794857111073646	CACATAAAA
chr19	21474681	21474682	chr19:21474682:T:C	rs112485658	T	C	T	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr19	21474694	21474695	chr19:21474695:C:G	rs62111481	C	G	C	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr19	21607616	21607617	chr19:21607617:G:A	rs2176802	G	A	.	Hoxd9.mouse_homeodomain_1	8	1	-	7.1462160923678635	5.746270592944195	GCCATAAAC
chr19	22027761	22027762	chr19:22027762:G:A	rs117934267	G	A	.	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr19	22820716	22820717	chr19:22820717:T:G	rs393048	T	G	.	Hoxd9.mouse_homeodomain_1	6	1	-	7.091711387329735	5.344627572488923	CCCATCAAA
chr19	22820723	22820724	chr19:22820724:A:C	rs428257	A	C	.	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr19	23556782	23556783	chr19:23556783:C:T	rs2195961	C	T	C	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr19	23573069	23573070	chr19:23573070:G:A	chr19:23573070:G:A	G	A	-	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr19	23686621	23686622	chr19:23686622:G:A	rs560055594	G	A	G	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr19	23686649	23686650	chr19:23686650:A:G	rs115172938	A	G	A	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr19	23901616	23901617	chr19:23901617:T:G	rs6511674	T	G	t	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr19	24192697	24192698	chr19:24192698:A:T	rs58437852	A	T	.	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr19	24371961	24371962	chr19:24371962:T:C	rs556353825	T	C	.	Hoxd9.mouse_homeodomain_1	6	1	-	7.889898683853121	1.18607273726139	ACCATAAAA
chr19	24907556	24907557	chr19:24907557:G:A	rs879080425	G	A	.	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr19	27346044	27346045	chr19:27346045:T:C	rs372316330	T	C	.	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr19	27348154	27348155	chr19:27348155:G:A	rs7339611	G	A	.	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr19	27348178	27348179	chr19:27348179:A:T	rs61150538	A	T	.	Hoxd9.mouse_homeodomain_1	6	1	+	8.027213970992095	5.137798200961511	CACATAAAA
chr19	27348226	27348227	chr19:27348227:C:T	rs7339540	C	T	.	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr19	27348839	27348840	chr19:27348840:A:C	rs4619523	A	C	.	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr19	27349089	27349090	chr19:27349090:C:T	rs8189892	C	T	.	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr19	27349232	27349233	chr19:27349233:T:C	rs71237952	T	C	.	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr19	27349262	27349263	chr19:27349263:A:C	rs59524943	A	C	.	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr19	27349597	27349598	chr19:27349598:A:G	rs62109095	A	G	.	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr19	27358699	27358700	chr19:27358700:C:T	rs377222244	C	T	.	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr19	27359515	27359516	chr19:27359516:A:C	rs73517491	A	C	.	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr19	27360888	27360889	chr19:27360889:A:G	rs112291285	A	G	.	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr19	27377654	27377655	chr19:27377655:G:A	rs62108535	G	A	.	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr19	27378541	27378542	chr19:27378542:T:C	rs76762955	T	C	.	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr19	27392832	27392833	chr19:27392833:A:C	rs2407336	A	C	.	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr19	27393819	27393820	chr19:27393820:T:G	rs2407340	T	G	.	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr19	27442295	27442296	chr19:27442296:A:G	rs73022586	A	G	.	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr19	27469607	27469608	chr19:27469608:C:A	rs35750054	C	A	.	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr19	27579245	27579246	chr19:27579246:G:A	rs10417159	G	A	.	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr19	27658891	27658892	chr19:27658892:C:T	rs739775	C	T	.	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr19	27658897	27658898	chr19:27658898:G:A	rs739776	G	A	.	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr19	27671376	27671377	chr19:27671377:A:G	rs56256043	A	G	.	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr19	27672738	27672739	chr19:27672739:C:T	rs144028978	C	T	.	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr19	27678298	27678299	chr19:27678299:T:G	rs66504041	T	G	.	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr19	27680047	27680048	chr19:27680048:A:G	rs11669533	A	G	.	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr19	27736191	27736192	chr19:27736192:T:C	rs7246826	T	C	.	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr19	27780098	27780099	chr19:27780099:G:A	rs2052175	G	A	g	Hoxd9.mouse_homeodomain_1	1	1	-	7.091711387329735	5.776909472996728	CCCATCAAA
chr19	27822761	27822762	chr19:27822762:A:T	rs113788092	A	T	a	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr19	27840664	27840665	chr19:27840665:C:T	rs11667773	C	T	c	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr19	27844018	27844019	chr19:27844019:G:T	rs35173855	G	T	g	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr19	27993932	27993933	chr19:27993933:A:T	rs4805013	A	T	A	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr19	28140627	28140628	chr19:28140628:C:T	rs11666663	C	T	C	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr19	28319460	28319461	chr19:28319461:G:C	rs12462278	G	C	C	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr19	28319550	28319551	chr19:28319551:C:G	rs2532048	C	G	G	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr19	28467343	28467344	chr19:28467344:T:C	rs2190832	T	C	T	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr19	28527679	28527680	chr19:28527680:A:G	rs8102679	A	G	G	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr19	28574656	28574657	chr19:28574657:T:A	rs75996104	T	A	T	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr19	28817133	28817134	chr19:28817134:G:A	rs5019727	G	A	G	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr19	28880225	28880226	chr19:28880226:A:G	rs56326629	A	G	G	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr19	28903158	28903159	chr19:28903159:G:A	rs34481423	G	A	T	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr19	28917950	28917951	chr19:28917951:T:C	rs7359994	T	C	T	Hoxd9.mouse_homeodomain_1	4	1	+	7.1462160923678635	4.491169447505284	GCCATAAAC
chr19	29296484	29296485	chr19:29296485:G:A	rs79240659	G	A	G	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr19	29296523	29296524	chr19:29296524:A:G	rs10404352	A	G	G	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr19	29374013	29374014	chr19:29374014:T:A	rs79187580	T	A	T	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr19	29421506	29421507	chr19:29421507:T:G	rs892074	T	G	G	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr19	29440486	29440487	chr19:29440487:A:G	rs12986041	A	G	G	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr19	29480838	29480839	chr19:29480839:T:A	rs10418244	T	A	A	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr19	29489480	29489481	chr19:29489481:C:A	rs187923351	C	A	C	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr19	29534825	29534826	chr19:29534826:C:G	rs11672506	C	G	C	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr19	29597485	29597486	chr19:29597486:A:G	rs4805442	A	G	G	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr19	29637106	29637107	chr19:29637107:C:A	rs761440643	C	A	C	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr19	29730546	29730547	chr19:29730547:T:C	rs10403744	T	C	C	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr19	29804725	29804726	chr19:29804726:G:A	rs11671136	G	A	G	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr19	29837943	29837944	chr19:29837944:C:T	rs1862542	C	T	C	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr19	30005027	30005028	chr19:30005028:A:G	rs169351	A	G	G	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr19	30074168	30074169	chr19:30074169:A:G	rs76934759	A	G	A	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr19	30097383	30097384	chr19:30097384:T:C	rs447035	T	C	C	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr19	30349342	30349343	chr19:30349343:G:T	rs1433078	G	T	T	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr19	30358232	30358233	chr19:30358233:C:T	rs4805554	C	T	T	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr19	30403810	30403811	chr19:30403811:A:G	rs12610794	A	G	A	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr19	30553117	30553118	chr19:30553118:A:G	rs6510167	A	G	G	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr19	30553936	30553937	chr19:30553937:G:C	rs11673135	G	C	G	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr19	30683177	30683178	chr19:30683178:G:T	rs564159791	G	T	G	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr19	30687517	30687518	chr19:30687518:T:C	rs12232879	T	C	T	Hoxd9.mouse_homeodomain_1	4	1	+	7.241935125048919	4.5868884801863405	CCCATACAA
chr19	30947683	30947684	chr19:30947684:C:G	rs12975419	C	G	G	Hoxd9.mouse_homeodomain_1	0	1	-	8.099252595576761	8.409487817756228	GCCATTAAA
chr19	31212813	31212814	chr19:31212814:T:A	rs12974626	T	A	T	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr19	31307760	31307761	chr19:31307761:C:T	rs75981480	C	T	C	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr19	31329586	31329587	chr19:31329587:T:C	rs2867598	T	C	T	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr19	31376735	31376736	chr19:31376736:A:G	rs67808363	A	G	A	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr19	31449180	31449181	chr19:31449181:C:T	rs12975463	C	T	C	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr19	31462447	31462448	chr19:31462448:A:T	rs16965791	A	T	A	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr19	31500945	31500946	chr19:31500946:T:C	rs12973681	T	C	T	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr19	31671305	31671306	chr19:31671306:A:G	rs8110097	A	G	G	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr19	31718113	31718114	chr19:31718114:C:G	rs113983043	C	G	C	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr19	31720471	31720472	chr19:31720472:C:T	rs117945000	C	T	C	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr19	32018332	32018333	chr19:32018333:A:G	rs16966609	A	G	A	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr19	32242037	32242038	chr19:32242038:A:G	rs55827902	A	G	A	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr19	32652622	32652623	chr19:32652623:A:G	rs148355535	A	G	A	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr19	32653312	32653313	chr19:32653313:G:C	rs80228273	G	C	G	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr19	32653341	32653342	chr19:32653342:A:C	rs259242	A	C	C	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr19	32735322	32735323	chr19:32735323:T:C	rs28787932	T	C	T	Hoxd9.mouse_homeodomain_1	8	1	-	8.287463081002919	6.821135972517665	CCAATAAAA
chr19	32842248	32842249	chr19:32842249:G:A	rs2287881	G	A	G	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr19	32873482	32873483	chr19:32873483:G:C	rs74646163	G	C	G	Hoxd9.mouse_homeodomain_1	0	1	+	8.678783717710262	8.98901893988973	GCCATAAAA
chr19	33362353	33362354	chr19:33362354:C:T	rs56187503	C	T	C	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr19	33426984	33426985	chr19:33426985:T:C	rs563423118	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.678783717710262	7.34470511784777	GCCATAAAA
chr19	33426996	33426997	chr19:33426997:G:A	rs78293394	G	A	G	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr19	33427007	33427008	chr19:33427008:G:A	rs113501180	G	A	G	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr19	33441834	33441835	chr19:33441835:C:T	rs117684449	C	T	C	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr19	33464001	33464002	chr19:33464002:G:A	rs575076607	G	A	G	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr19	33550611	33550612	chr19:33550612:T:A	rs12976330	T	A	T	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr19	33552467	33552468	chr19:33552468:C:G	rs12609149	C	G	C	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr19	33867700	33867701	chr19:33867701:A:G	rs7245483	A	G	A	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr19	33867882	33867883	chr19:33867883:T:C	rs11879262	T	C	T	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr19	33936820	33936821	chr19:33936821:A:G	rs4805064	A	G	A	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr19	34365154	34365155	chr19:34365155:G:A	rs8191358	G	A	G	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr19	34427983	34427984	chr19:34427984:A:C	rs1255365381	A	C	A	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr19	34496474	34496475	chr19:34496475:A:G	rs2910415	A	G	A	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr19	34639805	34639806	chr19:34639806:C:T	rs11084777	C	T	C	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr19	34640005	34640006	chr19:34640006:T:C	rs11672207	T	C	T	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr19	34678505	34678506	chr19:34678506:A:G	rs8111256	A	G	A	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr19	34967662	34967663	chr19:34967663:C:A	rs2651073	C	A	G	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr19	34967662	34967663	chr19:34967663:C:G	chr19:34967663:C:G	C	G	G	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr19	35004495	35004496	chr19:35004496:G:A	rs73038362	G	A	G	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr19	35067866	35067867	chr19:35067867:A:G	rs2085460	A	G	A	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr19	35165279	35165280	chr19:35165280:G:A	rs1688008	G	A	A	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr19	35174060	35174061	chr19:35174061:A:G	rs886137	A	G	A	Hoxd9.mouse_homeodomain_1	7	1	+	7.674217025556723	0.9703910789649911	CTCATAAAA
chr19	35174063	35174064	chr19:35174064:A:G	rs886138	A	G	A	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr19	35204497	35204498	chr19:35204498:C:T	rs1687988	C	T	C	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr19	35235284	35235285	chr19:35235285:C:T	rs62111449	C	T	C	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr19	35377129	35377130	chr19:35377130:G:A	rs12977409	G	A	G	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr19	35393825	35393826	chr19:35393826:C:T	rs7343112	C	T	T	Hoxd9.mouse_homeodomain_1	2	1	+	8.027213970992095	1.5397735133684596	CACATAAAA
chr19	35434314	35434315	chr19:35434315:C:T	rs75644727	C	T	C	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr19	35509277	35509278	chr19:35509278:T:A	rs201033257	T	A	-	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr19	35596513	35596514	chr19:35596514:T:C	rs191167553	T	C	t	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr19	35716767	35716768	chr19:35716768:G:C	rs375000684	G	C	G	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr19	36044098	36044099	chr19:36044099:T:C	rs139861667	T	C	T	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr19	36070421	36070422	chr19:36070422:G:C	rs192445198	G	C	G	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr19	36707350	36707351	chr19:36707351:G:T	rs3108570	G	T	T	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr19	37056316	37056317	chr19:37056317:C:A	rs7248948	C	A	C	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr19	37064217	37064218	chr19:37064218:T:C	rs10407265	T	C	T	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr19	37173356	37173357	chr19:37173357:G:A	rs112503901	G	A	.	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr19	37520450	37520451	chr19:37520451:A:G	rs35014847	A	G	A	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr19	37815980	37815981	chr19:37815981:A:G	rs8104076	A	G	a	Hoxd9.mouse_homeodomain_1	4	1	-	7.9772278588234515	5.3221812139608735	GCAATAAAA
chr19	37959858	37959859	chr19:37959859:T:C	rs353421	T	C	T	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr19	38255430	38255431	chr19:38255431:A:G	rs80295093	A	G	A	Hoxd9.mouse_homeodomain_1	4	1	-	7.716978748812629	5.061932103950051	GACATAAAA
chr19	38282337	38282338	chr19:38282338:T:C	rs7259936	T	C	C	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr19	38402836	38402837	chr19:38402837:G:A	chr19:38402837:G:A	G	A	G	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr19	38402872	38402873	chr19:38402873:A:C	chr19:38402873:A:C	A	C	A	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr19	38586612	38586613	chr19:38586613:G:T	rs73032657	G	T	G	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr19	38659558	38659559	chr19:38659559:A:G	rs7351086	A	G	a	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr19	38813175	38813176	chr19:38813176:G:T	rs116896264	G	T	G	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr19	38941772	38941773	chr19:38941773:T:G	rs7257007	T	G	g	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr19	38956478	38956479	chr19:38956479:C:T	rs10412049	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	+	8.409487817756228	6.514940512447287	CCCATTAAA
chr19	39030964	39030965	chr19:39030965:A:G	rs150422002	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.98901893988973	7.654940340027237	CCCATAAAA
chr19	39033167	39033168	chr19:39033168:C:G	rs184576548	C	G	C	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr19	39033197	39033198	chr19:39033198:T:G	chr19:39033198:T:G	T	G	T	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr19	39045097	39045098	chr19:39045098:G:A	rs523890	G	A	A	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr19	39053422	39053423	chr19:39053423:G:C	rs137897977	G	C	G	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr19	39053427	39053428	chr19:39053428:G:A	rs75316533	G	A	G	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr19	39125491	39125492	chr19:39125492:C:A	chr19:39125492:C:A	C	A	C	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr19	39159897	39159898	chr19:39159898:C:A	rs11666140	C	A	C	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr19	39159900	39159901	chr19:39159901:C:G	rs34326918	C	G	C	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr19	39401164	39401165	chr19:39401165:A:G	rs62119730	A	G	A	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr19	40145160	40145161	chr19:40145161:T:C	rs28631917	T	C	c	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr19	40286081	40286082	chr19:40286082:G:A	rs558448445	G	A	G	Hoxd9.mouse_homeodomain_1	8	1	+	7.522691831404475	8.98901893988973	CCCATAAAG
chr19	40286081	40286082	chr19:40286082:G:C	chr19:40286082:G:C	G	C	G	Hoxd9.mouse_homeodomain_1	8	1	+	7.522691831404475	7.45645131454733	CCCATAAAG
chr19	40404531	40404532	chr19:40404532:T:C	rs145046254	T	C	T	Hoxd9.mouse_homeodomain_1	6	1	-	7.45645131454733	0.752625367955599	CCCATAAAC
chr19	40659346	40659347	chr19:40659347:T:G	rs7259265	T	G	T	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr19	40699259	40699260	chr19:40699260:T:C	rs2561535	T	C	C	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr19	40718551	40718552	chr19:40718552:T:C	rs73045499	T	C	T	Hoxd9.mouse_homeodomain_1	7	1	-	7.522691831404475	0.8188658848127437	CCCATAAAG
chr19	40724240	40724241	chr19:40724241:G:A	rs4802086	G	A	A	Hoxd9.mouse_homeodomain_1	8	1	+	7.212456609225008	8.678783717710262	GCCATAAAG
chr19	41174518	41174519	chr19:41174519:C:T	rs305954	C	T	.	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr19	41576125	41576126	chr19:41576126:C:T	rs7257601	C	T	-	Hoxd9.mouse_homeodomain_1	1	1	+	7.45645131454733	6.141649400214323	CCCATAAAC
chr19	41576132	41576133	chr19:41576133:C:T	rs187573219	C	T	-	Hoxd9.mouse_homeodomain_1	8	1	+	7.45645131454733	6.056505815123662	CCCATAAAC
chr19	41605663	41605664	chr19:41605664:A:C	rs76038722	A	C	-	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr19	41810117	41810118	chr19:41810118:G:A	rs113110038	G	A	g	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr19	41937642	41937643	chr19:41937643:G:A	rs35287851	G	A	G	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr19	42202157	42202158	chr19:42202158:G:A	rs16975684	G	A	G	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr19	42456209	42456210	chr19:42456210:C:T	rs16975789	C	T	t	Hoxd9.mouse_homeodomain_1	3	1	-	7.34470511784777	8.678783717710262	GCCGTAAAA
chr19	42508378	42508379	chr19:42508379:A:G	rs571558604	A	G	a	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr19	43221483	43221484	chr19:43221484:G:T	rs10413923	G	T	.	Hoxd9.mouse_homeodomain_1	0	1	+	7.716978748812629	6.132666665683155	GACATAAAA
chr19	43299962	43299963	chr19:43299963:A:G	rs2098020	A	G	.	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr19	43439493	43439494	chr19:43439494:G:A	rs140867630	G	A	G	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr19	43439534	43439535	chr19:43439535:C:T	rs142399727	C	T	C	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr19	43532675	43532676	chr19:43532676:T:A	chr19:43532676:T:A	T	A	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.98901893988973	6.985537803081085	CCCATAAAA
chr19	43795513	43795514	chr19:43795514:C:T	rs10401203	C	T	T	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr19	43935202	43935203	chr19:43935203:G:C	rs73036792	G	C	G	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr19	44051851	44051852	chr19:44051852:G:C	rs531063561	G	C	.	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr19	44051866	44051867	chr19:44051867:G:A	rs116221361	G	A	.	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr19	44274251	44274252	chr19:44274252:A:C	rs1233428	A	C	C	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr19	44291137	44291138	chr19:44291138:C:T	rs2609874	C	T	T	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr19	44297381	44297382	chr19:44297382:G:T	rs77566333	G	T	G	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr19	44724455	44724456	chr19:44724456:A:G	rs873579	A	G	G	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr19	44724477	44724478	chr19:44724478:T:C	rs7254776	T	C	T	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr19	44754568	44754569	chr19:44754569:C:T	rs147415072	C	T	C	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr19	45091685	45091686	chr19:45091686:C:T	rs573776875	C	T	C	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr19	45174056	45174057	chr19:45174057:T:C	rs12460041	T	C	C	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr19	45295772	45295773	chr19:45295773:C:T	rs887276	C	T	C	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr19	45472326	45472327	chr19:45472327:T:C	rs146831032	T	C	T	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr19	45479305	45479306	chr19:45479306:C:T	rs139776424	C	T	C	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr19	45542573	45542574	chr19:45542574:C:T	rs58671202	C	T	C	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr19	45542589	45542590	chr19:45542590:T:C	rs28506127	T	C	C	Hoxd9.mouse_homeodomain_1	3	1	-	7.674217025556723	6.34013842569423	CTCATAAAA
chr19	45544380	45544381	chr19:45544381:G:A	rs9789254	G	A	G	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr19	45602337	45602338	chr19:45602338:C:T	rs7251997	C	T	C	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr19	45665014	45665015	chr19:45665015:G:A	rs28632030	G	A	G	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr19	45863947	45863948	chr19:45863948:T:C	rs10412574	T	C	C	Hoxd9.mouse_homeodomain_1	7	1	-	7.654940340027237	0.9511143934355059	CCCGTAAAA
chr19	45881105	45881106	chr19:45881106:G:A	rs531317048	G	A	G	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr19	45993534	45993535	chr19:45993535:A:C	rs749818	A	C	A	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr19	46063402	46063403	chr19:46063403:A:G	rs1035254	A	G	A	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr19	46115406	46115407	chr19:46115407:G:A	rs55759861	G	A	G	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr19	46184597	46184598	chr19:46184598:A:G	rs4802293	A	G	a	Hoxd9.mouse_homeodomain_1	4	1	-	8.678783717710262	6.023737072847684	GCCATAAAA
chr19	46289054	46289055	chr19:46289055:T:C	rs12973988	T	C	T	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr19	46289990	46289991	chr19:46289991:C:T	rs12980545	C	T	C	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr19	46300163	46300164	chr19:46300164:T:C	rs112821388	T	C	T	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr19	46442180	46442181	chr19:46442181:A:G	rs58998726	A	G	A	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr19	46449537	46449538	chr19:46449538:G:C	rs7249676	G	C	G	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr19	46478441	46478442	chr19:46478442:C:A	rs67364166	C	A	C	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr19	46478456	46478457	chr19:46478457:A:G	rs2311596	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.409487817756228	7.075409217893736	CCCATTAAA
chr19	46508378	46508379	chr19:46508379:T:G	rs62134756	T	G	T	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr19	46577169	46577170	chr19:46577170:C:G	rs117684068	C	G	C	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr19	46616095	46616096	chr19:46616096:A:C	rs10424535	A	C	c	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr19	46750346	46750347	chr19:46750347:C:T	rs563556153	C	T	c	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr19	46802502	46802503	chr19:46802503:T:G	rs12982003	T	G	T	Hoxd9.mouse_homeodomain_1	6	1	-	7.716978748812629	5.969894933971817	GACATAAAA
chr19	46881241	46881242	chr19:46881242:A:G	rs311360	A	G	A	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr19	46951561	46951562	chr19:46951562:T:C	rs77138297	T	C	T	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr19	47041820	47041821	chr19:47041821:A:T	rs77610969	A	T	a	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr19	47041827	47041828	chr19:47041828:T:A	rs12608513	T	A	A	Hoxd9.mouse_homeodomain_1	6	1	-	7.707931958869418	4.8185161888388315	CCAATTAAA
chr19	47093844	47093845	chr19:47093845:T:C	rs10408163	T	C	T	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr19	47100027	47100028	chr19:47100028:C:T	rs411560	C	T	T	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr19	47337024	47337025	chr19:47337025:T:G	rs7252458	T	G	G	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr19	47428096	47428097	chr19:47428097:C:T	rs189392043	C	T	C	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr19	47472236	47472237	chr19:47472237:T:C	chr19:47472237:T:C	T	C	T	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr19	47723382	47723383	chr19:47723383:C:T	rs113974662	C	T	C	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr19	47749352	47749353	chr19:47749353:T:C	rs11671852	T	C	T	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr19	47778895	47778896	chr19:47778896:A:G	rs542582049	A	G	A	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr19	47778914	47778915	chr19:47778915:T:C	rs1862485	T	C	C	Hoxd9.mouse_homeodomain_1	8	1	-	7.241935125048919	5.775608016563663	CCCATACAA
chr19	47778936	47778937	chr19:47778937:T:C	rs564179369	T	C	-	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr19	47894320	47894321	chr19:47894321:G:A	rs139827833	G	A	g	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr19	47967408	47967409	chr19:47967409:T:C	rs143157562	T	C	t	Hoxd9.mouse_homeodomain_1	4	1	+	8.678783717710262	6.023737072847684	GCCATAAAA
chr19	47967422	47967423	chr19:47967423:A:G	rs77735102	A	G	a	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr19	47994570	47994571	chr19:47994571:C:T	rs573684023	C	T	C	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr19	48091568	48091569	chr19:48091569:T:C	rs1651363	T	C	T	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr19	48314635	48314636	chr19:48314636:A:G	rs249370	A	G	a	Hoxd9.mouse_homeodomain_1	3	1	+	7.9772278588234515	6.643149258960959	GCAATAAAA
chr19	48487863	48487864	chr19:48487864:C:T	rs77500809	C	T	C	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr19	48565334	48565335	chr19:48565335:G:T	rs2544804	G	T	T	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr19	48579148	48579149	chr19:48579149:A:T	rs8108904	A	T	T	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr19	48793396	48793397	chr19:48793397:C:T	rs684959	C	T	C	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr19	49128211	49128212	chr19:49128212:T:C	rs147391976	T	C	T	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr19	49128244	49128245	chr19:49128245:A:G	rs79247105	A	G	A	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr19	49215527	49215528	chr19:49215528:T:A	rs11673283	T	A	t	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr19	49264586	49264587	chr19:49264587:G:A	rs62126171	G	A	G	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr19	49492485	49492486	chr19:49492486:G:A	rs76997502	G	A	G	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr19	49495069	49495070	chr19:49495070:C:T	rs113010433	C	T	c	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr19	49495070	49495071	chr19:49495071:G:A	rs141121779	G	A	c	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr19	49511719	49511720	chr19:49511720:G:A	rs2335534	G	A	G	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr19	49888904	49888905	chr19:49888905:A:G	rs112862536	A	G	A	Hoxd9.mouse_homeodomain_1	4	1	-	7.674217025556723	5.019170380694145	CTCATAAAA
chr19	50262083	50262084	chr19:50262084:A:G	rs1651552	A	G	G	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr19	50289925	50289926	chr19:50289926:C:G	rs588035	C	G	C	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr19	50308625	50308626	chr19:50308626:G:A	rs10425604	G	A	G	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr19	50333375	50333376	chr19:50333376:T:G	rs996916597	T	G	.	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr19	50635721	50635722	chr19:50635722:C:T	rs4801842	C	T	T	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr19	50677730	50677731	chr19:50677731:C:T	rs68187152	C	T	C	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr19	50860983	50860984	chr19:50860984:T:C	rs4802755	T	C	t	Hoxd9.mouse_homeodomain_1	7	1	-	8.287463081002919	1.5836371344111884	CCAATAAAA
chr19	50873773	50873774	chr19:50873774:G:A	rs2664155	G	A	.	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr19	50932479	50932480	chr19:50932480:C:T	rs1701906	C	T	C	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr19	51074714	51074715	chr19:51074715:G:A	rs189227889	G	A	G	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr19	51103907	51103908	chr19:51103908:A:G	rs79969007	A	G	A	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr19	51103949	51103950	chr19:51103950:T:A	rs67218028	T	A	T	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr19	51331496	51331497	chr19:51331497:G:A	rs4802782	G	A	A	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr19	51394137	51394138	chr19:51394138:T:G	rs10419880	T	G	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.9772278588234515	1.40171975461997	GCAATAAAA
chr19	51659802	51659803	chr19:51659803:A:G	rs7248908	A	G	G	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr19	51665810	51665811	chr19:51665811:A:G	rs28613314	A	G	A	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr19	51699918	51699919	chr19:51699919:A:G	rs1050490327	A	G	A	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr19	51800892	51800893	chr19:51800893:G:A	rs10421380	G	A	G	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr19	51808769	51808770	chr19:51808770:G:C	rs7253457	G	C	G	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr19	52305732	52305733	chr19:52305733:A:G	rs321913	A	G	G	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr19	52397110	52397111	chr19:52397111:C:A	rs182992118	C	A	C	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr19	52602293	52602294	chr19:52602294:A:G	rs329973	A	G	N	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr19	52641102	52641103	chr19:52641103:C:T	rs10424979	C	T	c	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr19	52641120	52641121	chr19:52641121:A:G	rs179321	A	G	N	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr19	52691785	52691786	chr19:52691786:T:C	rs60956916	T	C	t	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr19	52897610	52897611	chr19:52897611:G:A	chr19:52897611:G:A	G	A	g	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr19	52897650	52897651	chr19:52897651:C:T	rs530163639	C	T	c	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr19	52923955	52923956	chr19:52923956:C:T	rs11666503	C	T	c	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr19	52959703	52959704	chr19:52959704:G:T	rs7507133	G	T	g	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr19	53032070	53032071	chr19:53032071:A:G	rs10414203	A	G	a	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr19	53225984	53225985	chr19:53225985:G:A	rs7253386	G	A	G	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr19	53366844	53366845	chr19:53366845:G:A	rs8107801	G	A	g	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr19	53560891	53560892	chr19:53560892:G:A	rs73587718	G	A	A	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr19	53682896	53682897	chr19:53682897:G:A	rs12463003	G	A	G	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr19	53743218	53743219	chr19:53743219:T:C	rs55879021	T	C	c	Hoxd9.mouse_homeodomain_1	4	1	+	7.241935125048919	4.5868884801863405	CCCATACAA
chr19	53793516	53793517	chr19:53793517:A:C	rs10403690	A	C	C	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr19	53809668	53809669	chr19:53809669:G:A	chr19:53809669:G:A	G	A	G	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr19	54023306	54023307	chr19:54023307:T:G	rs574909321	T	G	T	Hoxd9.mouse_homeodomain_1	5	1	-	7.674217025556723	5.776909472996728	CTCATAAAA
chr19	54224866	54224867	chr19:54224867:G:A	rs56307620	G	A	g	Hoxd9.mouse_homeodomain_1	0	1	+	8.099252595576761	7.3103675617196195	GCCATTAAA
chr19	54224894	54224895	chr19:54224895:A:G	rs3859534	A	G	N	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr19	54289193	54289194	chr19:54289194:C:A	rs398227	C	A	a	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr19	54298004	54298005	chr19:54298005:C:T	rs7252525	C	T	c	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr19	54464051	54464052	chr19:54464052:C:T	rs147248943	C	T	c	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr19	54501299	54501300	chr19:54501300:C:T	rs61073316	C	T	C	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr19	54558505	54558506	chr19:54558506:C:T	rs16985743	C	T	T	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr19	54617624	54617625	chr19:54617625:G:C	rs12610058	G	C	C	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr19	54771342	54771343	chr19:54771343:G:A	rs35935333	G	A	.	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr19	54810141	54810142	chr19:54810142:A:G	rs604999	A	G	.	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr19	54813018	54813019	chr19:54813019:T:C	rs648689	T	C	.	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr19	54851747	54851748	chr19:54851748:G:A	rs201170508	G	A	.	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr19	54858781	54858782	chr19:54858782:C:T	rs201949114	C	T	.	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr19	54858787	54858788	chr19:54858788:T:G	rs199922010	T	G	.	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr19	54931105	54931106	chr19:54931106:C:T	rs8101856	C	T	C	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr19	55038514	55038515	chr19:55038515:C:T	rs530271575	C	T	C	Hoxd9.mouse_homeodomain_1	8	1	+	7.45645131454733	6.056505815123662	CCCATAAAC
chr19	55492327	55492328	chr19:55492328:C:A	rs184071903	C	A	C	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr19	55507379	55507380	chr19:55507380:T:C	rs73608772	T	C	c	Hoxd9.mouse_homeodomain_1	7	1	-	7.654940340027237	0.9511143934355059	CCCGTAAAA
chr19	55507396	55507397	chr19:55507397:G:T	rs58024947	G	T	g	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr19	56102122	56102123	chr19:56102123:C:T	rs62122448	C	T	C	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr19	56292683	56292684	chr19:56292684:A:C	rs55969042	A	C	A	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr19	56292702	56292703	chr19:56292703:T:C	rs73052139	T	C	T	Hoxd9.mouse_homeodomain_1	4	1	+	8.409487817756228	5.7544411728936495	CCCATTAAA
chr19	56294693	56294694	chr19:56294694:C:T	rs117725419	C	T	C	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr19	56478243	56478244	chr19:56478244:G:A	rs78066039	G	A	g	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr19	56478244	56478245	chr19:56478245:G:T	rs79041486	G	T	g	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr19	56748267	56748268	chr19:56748268:T:C	rs12460697	T	C	T	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr19	56868776	56868777	chr19:56868777:C:T	rs956653605	C	T	C	Hoxd9.mouse_homeodomain_1	1	1	+	6.931699902869452	5.616897988536444	GCCATACAA
chr19	56900418	56900419	chr19:56900419:C:T	rs77949882	C	T	C	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr19	57077494	57077495	chr19:57077495:A:C	rs78582596	A	C	C	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr19	57265676	57265677	chr19:57265677:T:C	rs73936611	T	C	T	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr19	57331605	57331606	chr19:57331606:T:C	rs4801221	T	C	C	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr19	57338786	57338787	chr19:57338787:A:C	rs7255435	A	C	A	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr19	57560483	57560484	chr19:57560484:G:T	chr19:57560484:G:T	G	T	G	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr19	57632664	57632665	chr19:57632665:G:A	rs144668594	G	A	G	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr19	57632680	57632681	chr19:57632681:A:T	rs10418967	A	T	T	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr19	57827673	57827674	chr19:57827674:A:G	rs4640288	A	G	.	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr19	57841634	57841635	chr19:57841635:G:A	rs34871842	G	A	.	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr19	58154298	58154299	chr19:58154299:G:T	rs957522943	G	T	G	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr19	58154299	58154300	chr19:58154300:C:T	rs1008149169	C	T	C	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr19	58154327	58154328	chr19:58154328:G:A	rs139427467	G	A	G	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr19	58229803	58229804	chr19:58229804:G:A	rs260441	G	A	G	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr19	58275153	58275154	chr19:58275154:A:C	rs378452	A	C	A	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr19	58374334	58374335	chr19:58374335:G:A	rs6510139	G	A	g	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr19	58552959	58552960	chr19:58552960:C:T	rs10414125	C	T	C	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr19	58572274	58572275	chr19:58572275:C:A	rs73562719	C	A	c	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr2	467734	467735	chr2:467735:T:C	rs872438	T	C	C	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr2	603876	603877	chr2:603877:T:G	rs1320339	T	G	T	Hoxd9.mouse_homeodomain_1	2	1	-	8.287463081002919	8.98901893988973	CCAATAAAA
chr2	603882	603883	chr2:603883:G:T	rs1320340	G	T	T	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr2	653194	653195	chr2:653195:G:A	rs13396935	G	A	G	Hoxd9.mouse_homeodomain_1	0	1	-	8.409487817756228	6.514940512447287	CCCATTAAA
chr2	696516	696517	chr2:696517:C:T	rs12990314	C	T	C	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr2	904430	904431	chr2:904431:A:G	rs113352847	A	G	G	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr2	907463	907464	chr2:907464:C:T	rs6753648	C	T	C	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr2	1052751	1052752	chr2:1052752:A:G	rs78957789	A	G	A	Hoxd9.mouse_homeodomain_1	5	1	+	8.287463081002919	1.9132733627563638	CCAATAAAA
chr2	1366865	1366866	chr2:1366866:C:T	rs34048144	C	T	C	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr2	1592679	1592680	chr2:1592680:G:A	rs73913824	G	A	G	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr2	1708755	1708756	chr2:1708756:G:A	rs773825834	G	A	G	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr2	1721199	1721200	chr2:1721200:C:G	rs76843021	C	G	C	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr2	1748410	1748411	chr2:1748411:T:A	rs139248776	T	A	T	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr2	1748456	1748457	chr2:1748457:A:G	rs2382558	A	G	G	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr2	1832028	1832029	chr2:1832029:A:C	rs6548055	A	C	C	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr2	1916074	1916075	chr2:1916075:T:C	rs1432539	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.678783717710262	7.34470511784777	GCCATAAAA
chr2	2018613	2018614	chr2:2018614:T:C	rs72767340	T	C	T	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr2	2026170	2026171	chr2:2026171:C:T	rs11127292	C	T	C	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr2	2163885	2163886	chr2:2163886:T:A	rs79320316	T	A	T	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr2	2334450	2334451	chr2:2334451:T:C	rs13420595	T	C	C	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr2	2493097	2493098	chr2:2493098:A:G	rs56170583	A	G	A	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr2	2526592	2526593	chr2:2526593:G:T	rs17338184	G	T	G	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr2	2639120	2639121	chr2:2639121:C:T	rs13391262	C	T	C	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr2	2651485	2651486	chr2:2651486:C:T	rs6736081	C	T	.	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr2	2881100	2881101	chr2:2881101:C:A	rs7588543	C	A	C	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr2	3024016	3024017	chr2:3024017:T:G	rs17040726	T	G	T	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr2	3105567	3105568	chr2:3105568:A:T	rs7570482	A	T	A	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr2	3214751	3214752	chr2:3214752:T:C	rs79267640	T	C	T	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr2	3318426	3318427	chr2:3318427:T:C	rs12619610	T	C	T	Hoxd9.mouse_homeodomain_1	4	1	+	7.1462160923678635	4.491169447505284	GCCATAAAC
chr2	3457098	3457099	chr2:3457099:T:C	rs7579428	T	C	C	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr2	3457117	3457118	chr2:3457118:G:A	rs117295972	G	A	A	Hoxd9.mouse_homeodomain_1	3	1	+	7.34470511784777	8.678783717710262	GCCGTAAAA
chr2	3463527	3463528	chr2:3463528:A:G	rs11693786	A	G	G	Hoxd9.mouse_homeodomain_1	8	1	+	7.091711387329735	5.6253842788444794	CCCATCAAA
chr2	3468448	3468449	chr2:3468449:A:C	rs35759059	A	C	A	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr2	3616993	3616994	chr2:3616994:T:C	rs12993068	T	C	C	Hoxd9.mouse_homeodomain_1	5	1	-	8.027213970992095	1.6530242527455408	CACATAAAA
chr2	3727930	3727931	chr2:3727931:C:T	rs145935513	C	T	C	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr2	3901891	3901892	chr2:3901892:T:C	rs72772999	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.522691831404475	6.188613231541982	CCCATAAAG
chr2	4551763	4551764	chr2:4551764:A:T	rs13391917	A	T	A	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr2	4873553	4873554	chr2:4873554:C:T	rs73912718	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	+	7.091711387329735	5.197164082020794	CCCATCAAA
chr2	4929542	4929543	chr2:4929543:A:C	rs62110477	A	C	A	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr2	4964659	4964660	chr2:4964660:G:A	rs140067566	G	A	G	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr2	5254969	5254970	chr2:5254970:G:A	rs11889641	G	A	G	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr2	5254970	5254971	chr2:5254971:A:C	rs1453763	A	C	C	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr2	5372138	5372139	chr2:5372139:T:C	rs140111496	T	C	T	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr2	5403601	5403602	chr2:5403602:G:A	rs792046	G	A	G	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr2	5742045	5742046	chr2:5742046:T:C	rs2564052	T	C	C	Hoxd9.mouse_homeodomain_1	3	1	-	7.716978748812629	6.382900148950135	GACATAAAA
chr2	5756668	5756669	chr2:5756669:G:A	rs73150223	G	A	G	Hoxd9.mouse_homeodomain_1	3	1	+	7.34470511784777	8.678783717710262	GCCGTAAAA
chr2	5777547	5777548	chr2:5777548:T:C	rs1041651850	T	C	T	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr2	5983673	5983674	chr2:5983674:C:T	rs1036515824	C	T	C	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr2	6418491	6418492	chr2:6418492:C:T	rs74801869	C	T	C	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr2	6584797	6584798	chr2:6584798:T:A	rs1049533159	T	A	T	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr2	6773515	6773516	chr2:6773516:C:T	rs62105524	C	T	C	Hoxd9.mouse_homeodomain_1	2	1	+	7.091711387329735	0.6042709297060974	CCCATCAAA
chr2	7672967	7672968	chr2:7672968:G:A	rs7582203	G	A	G	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr2	7916349	7916350	chr2:7916350:A:G	rs10204491	A	G	G	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr2	8299554	8299555	chr2:8299555:G:A	rs3102944	G	A	A	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr2	8314710	8314711	chr2:8314711:G:T	rs142131268	G	T	G	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr2	8346528	8346529	chr2:8346529:C:T	rs3111424	C	T	T	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr2	8457757	8457758	chr2:8457758:G:C	rs10190752	G	C	G	Hoxd9.mouse_homeodomain_1	8	1	+	7.522691831404475	7.45645131454733	CCCATAAAG
chr2	8461697	8461698	chr2:8461698:A:G	rs17498121	A	G	A	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr2	8476206	8476207	chr2:8476207:G:A	rs4669278	G	A	A	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr2	8593670	8593671	chr2:8593671:C:T	rs10184228	C	T	c	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr2	8678034	8678035	chr2:8678035:G:A	rs7594741	G	A	A	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr2	8848529	8848530	chr2:8848530:G:A	rs6746864	G	A	A	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr2	9104279	9104280	chr2:9104280:G:A	rs11688561	G	A	G	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr2	9179439	9179440	chr2:9179440:A:G	rs1340074619	A	G	A	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr2	9208131	9208132	chr2:9208132:T:C	rs34463422	T	C	C	Hoxd9.mouse_homeodomain_1	4	1	+	7.091711387329735	4.436664742467157	CCCATCAAA
chr2	9335761	9335762	chr2:9335762:A:G	rs539874000	A	G	A	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr2	9393400	9393401	chr2:9393401:C:G	chr2:9393401:C:G	C	G	C	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr2	9409548	9409549	chr2:9409549:G:C	rs16867024	G	C	G	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr2	9429450	9429451	chr2:9429451:C:T	rs10184067	C	T	C	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr2	9629640	9629641	chr2:9629641:T:G	rs72777047	T	G	T	Hoxd9.mouse_homeodomain_1	5	1	-	7.45645131454733	5.559143761987334	CCCATAAAC
chr2	9847545	9847546	chr2:9847546:T:C	rs59288259	T	C	C	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr2	9858837	9858838	chr2:9858838:A:G	rs287997	A	G	A	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr2	9903380	9903381	chr2:9903381:T:C	rs392617	T	C	C	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr2	9992301	9992302	chr2:9992302:C:T	rs571567460	C	T	C	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr2	10013430	10013431	chr2:10013431:G:A	rs868398176	G	A	-	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr2	10014794	10014795	chr2:10014795:C:T	rs112105745	C	T	-	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr2	10014803	10014804	chr2:10014804:A:C	rs11897118	A	C	-	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr2	10057142	10057143	chr2:10057143:T:A	rs15380	T	A	A	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr2	10089783	10089784	chr2:10089784:G:A	rs11680378	G	A	G	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr2	10124581	10124582	chr2:10124582:T:C	rs6741290	T	C	T	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr2	10165307	10165308	chr2:10165308:C:T	rs35110249	C	T	C	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr2	10183271	10183272	chr2:10183272:G:A	rs13390624	G	A	g	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr2	10223107	10223108	chr2:10223108:G:C	rs60785900	G	C	G	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr2	10262636	10262637	chr2:10262637:A:G	rs7597744	A	G	A	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr2	10275428	10275429	chr2:10275429:T:A	rs77871688	T	A	T	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr2	10279567	10279568	chr2:10279568:C:T	rs75338021	C	T	C	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr2	10305405	10305406	chr2:10305406:G:T	rs6714483	G	T	G	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr2	10385997	10385998	chr2:10385998:G:T	rs11903785	G	T	G	Hoxd9.mouse_homeodomain_1	2	1	-	7.34470511784777	6.643149258960959	GCCGTAAAA
chr2	10533232	10533233	chr2:10533233:T:C	rs1641149	T	C	C	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr2	10793068	10793069	chr2:10793069:T:A	rs17455876	T	A	T	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr2	10886760	10886761	chr2:10886761:C:T	rs72781440	C	T	T	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr2	10906056	10906057	chr2:10906057:G:T	rs74997115	G	T	G	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr2	10906058	10906059	chr2:10906059:A:G	rs115420293	A	G	A	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr2	10940782	10940783	chr2:10940783:G:A	rs1003892779	G	A	G	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr2	11414828	11414829	chr2:11414829:C:T	rs62118913	C	T	C	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr2	11533434	11533435	chr2:11533435:C:T	rs73917248	C	T	C	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr2	11533907	11533908	chr2:11533908:A:G	rs11684917	A	G	A	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr2	11533925	11533926	chr2:11533926:A:G	rs143632904	A	G	A	Hoxd9.mouse_homeodomain_1	6	1	+	7.9772278588234515	1.2734019122317202	GCAATAAAA
chr2	11655776	11655777	chr2:11655777:T:G	rs1018857437	T	G	T	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr2	11688503	11688504	chr2:11688504:G:A	rs11889885	G	A	G	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr2	11688526	11688527	chr2:11688527:A:G	rs11884930	A	G	a	Hoxd9.mouse_homeodomain_1	6	1	+	7.654940340027237	0.9511143934355059	CCCGTAAAA
chr2	11688530	11688531	chr2:11688531:T:G	rs72773920	T	G	T	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr2	11703580	11703581	chr2:11703581:C:T	rs13407481	C	T	T	Hoxd9.mouse_homeodomain_1	8	1	+	7.1462160923678635	5.746270592944195	GCCATAAAC
chr2	11873177	11873178	chr2:11873178:G:A	rs75620711	G	A	G	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr2	11984395	11984396	chr2:11984396:G:A	rs16858108	G	A	G	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr2	12017552	12017553	chr2:12017553:T:G	rs2890409	T	G	.	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr2	12141637	12141638	chr2:12141638:C:T	chr2:12141638:C:T	C	T	C	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr2	12154710	12154711	chr2:12154711:A:G	rs541703153	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	7.1462160923678635	5.81213749250537	GCCATAAAC
chr2	12245991	12245992	chr2:12245992:A:T	rs12478342	A	T	A	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr2	12493061	12493062	chr2:12493062:C:T	rs78543962	C	T	C	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr2	12761189	12761190	chr2:12761190:G:C	rs4669871	G	C	G	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr2	12796159	12796160	chr2:12796160:A:G	rs7557984	A	G	A	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr2	12819736	12819737	chr2:12819737:G:C	rs12105370	G	C	G	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr2	12981008	12981009	chr2:12981009:C:T	rs7578329	C	T	C	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr2	13035061	13035062	chr2:13035062:C:A	rs10209223	C	A	a	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr2	13477767	13477768	chr2:13477768:C:T	rs7586380	C	T	T	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr2	13531594	13531595	chr2:13531595:T:A	rs9917367	T	A	t	Hoxd9.mouse_homeodomain_1	5	1	-	7.716978748812629	7.137447626679127	GACATAAAA
chr2	13680206	13680207	chr2:13680207:C:G	rs12999021	C	G	C	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr2	13916391	13916392	chr2:13916392:T:C	rs188602679	T	C	T	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr2	14365824	14365825	chr2:14365825:T:G	rs10171046	T	G	G	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr2	14933670	14933671	chr2:14933671:G:C	rs13400496	G	C	G	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr2	14986314	14986315	chr2:14986315:C:G	rs4670054	C	G	C	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr2	15570038	15570039	chr2:15570039:G:A	rs115884672	G	A	G	Hoxd9.mouse_homeodomain_1	0	1	-	8.98901893988973	7.094471634580788	CCCATAAAA
chr2	15577792	15577793	chr2:15577793:C:A	rs6431715	C	A	C	Hoxd9.mouse_homeodomain_1	0	1	+	8.409487817756228	7.3103675617196195	CCCATTAAA
chr2	15630650	15630651	chr2:15630651:C:T	rs3770471	C	T	C	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr2	15667512	15667513	chr2:15667513:A:C	rs807573	A	C	C	Hoxd9.mouse_homeodomain_1	5	1	+	7.716978748812629	5.819671196252634	GACATAAAA
chr2	15701095	15701096	chr2:15701096:C:A	rs75982456	C	A	C	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr2	15701105	15701106	chr2:15701106:T:A	rs1421610	T	A	A	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr2	15727878	15727879	chr2:15727879:T:C	rs4668965	T	C	T	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr2	15927676	15927677	chr2:15927677:C:T	rs72770523	C	T	C	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr2	16015428	16015429	chr2:16015429:C:T	rs7561805	C	T	-	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr2	16103069	16103070	chr2:16103070:A:C	rs4668486	A	C	A	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr2	16103113	16103114	chr2:16103114:G:A	rs146518246	G	A	G	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr2	16140458	16140459	chr2:16140459:T:C	rs1028537944	T	C	T	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr2	16179740	16179741	chr2:16179741:G:A	rs73213911	G	A	G	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr2	16197717	16197718	chr2:16197718:G:A	rs62114475	G	A	G	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr2	16426057	16426058	chr2:16426058:C:G	rs764828224	C	G	C	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr2	16628727	16628728	chr2:16628728:G:C	rs116185213	G	C	G	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr2	16730106	16730107	chr2:16730107:C:T	rs16982713	C	T	C	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr2	16886318	16886319	chr2:16886319:T:C	rs10183667	T	C	T	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr2	17253733	17253734	chr2:17253734:T:C	rs6720417	T	C	T	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr2	17374271	17374272	chr2:17374272:C:T	rs2946576	C	T	T	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr2	17592878	17592879	chr2:17592879:C:T	rs1033300	C	T	C	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr2	17912008	17912009	chr2:17912009:G:C	rs73225038	G	C	G	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr2	18237394	18237395	chr2:18237395:C:T	rs78380869	C	T	C	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr2	18745901	18745902	chr2:18745902:T:C	rs4832452	T	C	T	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr2	18788080	18788081	chr2:18788081:A:G	rs4832622	A	G	A	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr2	18799607	18799608	chr2:18799608:G:A	rs186574753	G	A	G	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr2	18998578	18998579	chr2:18998579:T:C	rs72780755	T	C	T	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr2	19081064	19081065	chr2:19081065:G:A	rs62125001	G	A	G	Hoxd9.mouse_homeodomain_1	0	1	+	7.716978748812629	6.928093714955487	GACATAAAA
chr2	19086335	19086336	chr2:19086336:G:A	rs11694107	G	A	A	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr2	19479745	19479746	chr2:19479746:A:G	rs12995430	A	G	A	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr2	19631620	19631621	chr2:19631621:G:A	rs896799	G	A	A	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr2	19675150	19675151	chr2:19675151:A:G	rs17619532	A	G	A	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr2	19755854	19755855	chr2:19755855:A:G	rs10178683	A	G	G	Hoxd9.mouse_homeodomain_1	8	1	+	7.091711387329735	5.6253842788444794	CCCATCAAA
chr2	19755869	19755870	chr2:19755870:G:C	rs10189561	G	C	C	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr2	19850506	19850507	chr2:19850507:A:G	rs1960090	A	G	A	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr2	19883733	19883734	chr2:19883734:T:C	rs76505010	T	C	T	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr2	19887066	19887067	chr2:19887067:C:T	rs555955056	C	T	C	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr2	19912068	19912069	chr2:19912069:C:T	rs10182866	C	T	C	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr2	19912078	19912079	chr2:19912079:G:A	rs77400381	G	A	G	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr2	20156910	20156911	chr2:20156911:C:T	rs71435547	C	T	C	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr2	20396196	20396197	chr2:20396197:T:C	rs343151	T	C	C	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr2	20400197	20400198	chr2:20400198:A:G	rs343148	A	G	A	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr2	20452208	20452209	chr2:20452209:C:T	rs1290764002	C	T	C	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr2	20492271	20492272	chr2:20492272:G:T	chr2:20492272:G:T	G	T	G	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr2	20493820	20493821	chr2:20493821:G:A	rs61019536	G	A	G	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr2	20501346	20501347	chr2:20501347:T:C	rs59508397	T	C	T	Hoxd9.mouse_homeodomain_1	5	1	-	8.287463081002919	1.9132733627563638	CCAATAAAA
chr2	20634817	20634818	chr2:20634818:G:A	rs78497548	G	A	g	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr2	20747436	20747437	chr2:20747437:T:C	rs667529	T	C	C	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr2	21181595	21181596	chr2:21181596:T:A	rs499757	T	A	A	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr2	21304163	21304164	chr2:21304164:A:G	rs6739502	A	G	A	Hoxd9.mouse_homeodomain_1	4	1	-	8.409487817756228	5.7544411728936495	CCCATTAAA
chr2	21406930	21406931	chr2:21406931:A:G	chr2:21406931:A:G	A	G	A	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr2	22970232	22970233	chr2:22970233:T:C	rs34233089	T	C	T	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr2	23187483	23187484	chr2:23187484:G:A	rs151049139	G	A	G	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr2	23287291	23287292	chr2:23287292:A:C	rs35355490	A	C	A	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr2	23358686	23358687	chr2:23358687:C:T	rs6749822	C	T	C	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr2	23449772	23449773	chr2:23449773:C:T	rs181772914	C	T	C	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr2	23454044	23454045	chr2:23454045:C:T	rs11689283	C	T	C	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr2	23482326	23482327	chr2:23482327:A:C	rs4665217	A	C	C	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr2	23536547	23536548	chr2:23536548:G:A	rs139192839	G	A	G	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr2	23541812	23541813	chr2:23541813:G:A	rs72793548	G	A	G	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr2	23550094	23550095	chr2:23550095:A:G	rs7596142	A	G	G	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr2	23550099	23550100	chr2:23550100:C:T	rs114835550	C	T	C	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr2	24047599	24047600	chr2:24047600:C:T	chr2:24047600:C:T	C	T	C	Hoxd9.mouse_homeodomain_1	1	1	+	7.654940340027237	6.34013842569423	CCCGTAAAA
chr2	24050729	24050730	chr2:24050730:T:C	rs3769668	T	C	T	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr2	24449265	24449266	chr2:24449266:G:A	rs192164027	G	A	A	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr2	24617655	24617656	chr2:24617656:C:T	rs55783347	C	T	C	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr2	24848122	24848123	chr2:24848123:T:C	rs62140608	T	C	T	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr2	25419424	25419425	chr2:25419425:T:C	rs17745893	T	C	T	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr2	25700393	25700394	chr2:25700394:A:G	rs925205853	A	G	A	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr2	26243903	26243904	chr2:26243904:C:T	rs3806514	C	T	T	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr2	26244106	26244107	chr2:26244107:C:T	rs3806515	C	T	C	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr2	26281313	26281314	chr2:26281314:A:T	rs79171880	A	T	A	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr2	26341100	26341101	chr2:26341101:G:A	rs7584739	G	A	G	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr2	26347718	26347719	chr2:26347719:A:G	rs4665852	A	G	A	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr2	26353117	26353118	chr2:26353118:A:G	rs11898247	A	G	G	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr2	26363515	26363516	chr2:26363516:C:T	rs80042903	C	T	C	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr2	26524638	26524639	chr2:26524639:G:A	rs79918258	G	A	G	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr2	26527551	26527552	chr2:26527552:C:G	rs56246466	C	G	C	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr2	26666915	26666916	chr2:26666916:A:C	rs1298370	A	C	A	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr2	26913873	26913874	chr2:26913874:G:A	rs190357834	G	A	G	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr2	27100329	27100330	chr2:27100330:T:C	rs7573066	T	C	T	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr2	27133409	27133410	chr2:27133410:T:C	rs2289359	T	C	T	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr2	27217773	27217774	chr2:27217774:A:G	rs188327098	A	G	A	Hoxd9.mouse_homeodomain_1	5	1	+	7.1462160923678635	0.7720263741213071	GCCATAAAC
chr2	27651464	27651465	chr2:27651465:A:C	rs10201652	A	C	C	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr2	27766862	27766863	chr2:27766863:A:G	rs114472958	A	G	A	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr2	27844863	27844864	chr2:27844864:G:C	rs6737826	G	C	G	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr2	27922445	27922446	chr2:27922446:A:G	rs72810585	A	G	A	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr2	27954329	27954330	chr2:27954330:G:T	rs572231595	G	T	G	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr2	28164988	28164989	chr2:28164989:T:C	rs141032397	T	C	T	Hoxd9.mouse_homeodomain_1	2	1	-	8.287463081002919	5.5210272824374	CCAATAAAA
chr2	28168460	28168461	chr2:28168461:G:A	rs72816414	G	A	G	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr2	28269476	28269477	chr2:28269477:G:T	rs907355570	G	T	G	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr2	28269742	28269743	chr2:28269743:C:T	rs55960107	C	T	C	Hoxd9.mouse_homeodomain_1	1	1	+	8.98901893988973	7.674217025556723	CCCATAAAA
chr2	28409406	28409407	chr2:28409407:G:T	rs74612527	G	T	G	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr2	28418999	28419000	chr2:28419000:C:T	rs11673927	C	T	C	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr2	28451761	28451762	chr2:28451762:A:G	rs34725152	A	G	G	Hoxd9.mouse_homeodomain_1	4	1	-	8.027213970992095	5.372167326129518	CACATAAAA
chr2	28463634	28463635	chr2:28463635:C:T	rs2972045	C	T	C	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr2	28463635	28463636	chr2:28463636:G:A	rs1581036	G	A	C	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr2	28585031	28585032	chr2:28585032:C:T	rs4666103	C	T	C	Hoxd9.mouse_homeodomain_1	2	1	+	7.522691831404475	1.0352513737808375	CCCATAAAG
chr2	28623694	28623695	chr2:28623695:A:G	rs7604903	A	G	A	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr2	28623700	28623701	chr2:28623701:A:G	rs6547863	A	G	G	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr2	28625770	28625771	chr2:28625771:T:C	rs188961803	T	C	t	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr2	28717287	28717288	chr2:28717288:C:T	rs56240884	C	T	C	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr2	28870793	28870794	chr2:28870794:C:G	rs182973373	C	G	G	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr2	28870818	28870819	chr2:28870819:C:T	rs555971218	C	T	C	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr2	29402249	29402250	chr2:29402250:G:A	rs4514836	G	A	G	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr2	29462559	29462560	chr2:29462560:C:T	rs3923029	C	T	C	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr2	29480571	29480572	chr2:29480572:A:G	rs11680438	A	G	A	Hoxd9.mouse_homeodomain_1	4	1	-	7.9772278588234515	5.3221812139608735	GCAATAAAA
chr2	29480579	29480580	chr2:29480580:G:A	rs62129089	G	A	G	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr2	29528767	29528768	chr2:29528768:T:C	rs11693420	T	C	T	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr2	29867474	29867475	chr2:29867475:T:C	rs12620548	T	C	T	Hoxd9.mouse_homeodomain_1	8	1	-	7.9772278588234515	6.510900750338196	GCAATAAAA
chr2	29966873	29966874	chr2:29966874:G:A	rs35773364	G	A	G	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr2	30034613	30034614	chr2:30034614:A:G	rs149867066	A	G	A	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr2	30158320	30158321	chr2:30158321:A:G	rs7603324	A	G	A	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr2	30305619	30305620	chr2:30305620:G:C	rs75239248	G	C	G	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr2	30377545	30377546	chr2:30377546:C:T	rs11885871	C	T	T	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr2	30409349	30409350	chr2:30409350:T:G	rs829609	T	G	G	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr2	30422556	30422557	chr2:30422557:A:C	chr2:30422557:A:C	A	C	a	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr2	30450193	30450194	chr2:30450194:C:G	rs1662944	C	G	G	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr2	30648312	30648313	chr2:30648313:A:T	rs2602785	A	T	T	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr2	30662950	30662951	chr2:30662951:G:T	rs1447188	G	T	T	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr2	30848005	30848006	chr2:30848006:T:A	rs2364428	T	A	T	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr2	30948543	30948544	chr2:30948544:C:T	rs889897	C	T	C	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr2	31188663	31188664	chr2:31188664:A:C	rs4245767	A	C	A	Hoxd9.mouse_homeodomain_1	7	1	+	7.716978748812629	4.827562978782042	GACATAAAA
chr2	31189779	31189780	chr2:31189780:T:C	rs1562021	T	C	t	Hoxd9.mouse_homeodomain_1	3	1	-	8.678783717710262	7.34470511784777	GCCATAAAA
chr2	31217949	31217950	chr2:31217950:G:C	rs78107939	G	C	G	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr2	31231524	31231525	chr2:31231525:C:T	rs4952070	C	T	T	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr2	31256367	31256368	chr2:31256368:G:A	rs671403	G	A	G	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr2	31447356	31447357	chr2:31447357:A:G	rs11674948	A	G	A	Hoxd9.mouse_homeodomain_1	4	1	-	7.9772278588234515	5.3221812139608735	GCAATAAAA
chr2	31962802	31962803	chr2:31962803:T:C	rs563976914	T	C	T	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr2	32632381	32632382	chr2:32632382:T:G	rs143085051	T	G	T	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr2	32752673	32752674	chr2:32752674:G:A	rs2116588	G	A	A	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr2	32886460	32886461	chr2:32886461:A:C	rs150793705	A	C	A	Hoxd9.mouse_homeodomain_1	3	1	+	7.716978748812629	1.1414706446091483	GACATAAAA
chr2	32895705	32895706	chr2:32895706:G:A	rs11884645	G	A	G	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr2	32922790	32922791	chr2:32922791:T:C	rs72613865	T	C	T	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr2	33028950	33028951	chr2:33028951:C:T	rs62135744	C	T	T	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr2	33154789	33154790	chr2:33154790:C:T	rs74530004	C	T	C	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr2	33247496	33247497	chr2:33247497:A:G	rs114059462	A	G	A	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr2	33479717	33479718	chr2:33479718:C:A	rs6543716	C	A	C	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr2	33582024	33582025	chr2:33582025:C:T	rs7588728	C	T	C	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr2	33719247	33719248	chr2:33719248:A:G	rs6716580	A	G	A	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr2	33919482	33919483	chr2:33919483:G:A	rs10205964	G	A	G	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr2	33925782	33925783	chr2:33925783:C:G	rs116025870	C	G	C	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr2	33984610	33984611	chr2:33984611:T:C	rs12473430	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.716978748812629	6.382900148950135	GACATAAAA
chr2	34005483	34005484	chr2:34005484:T:C	rs74406186	T	C	T	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr2	34154499	34154500	chr2:34154500:A:T	rs10172276	A	T	T	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr2	34363236	34363237	chr2:34363237:T:C	rs1347302	T	C	C	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr2	34796826	34796827	chr2:34796827:G:C	rs13313789	G	C	G	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr2	34810707	34810708	chr2:34810708:T:G	chr2:34810708:T:G	T	G	T	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr2	34997954	34997955	chr2:34997955:C:T	rs12613623	C	T	C	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr2	35319861	35319862	chr2:35319862:A:C	rs6751793	A	C	C	Hoxd9.mouse_homeodomain_1	8	1	+	8.409487817756228	6.876920192413827	CCCATTAAA
chr2	35797356	35797357	chr2:35797357:C:T	rs1519699	C	T	C	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr2	35910322	35910323	chr2:35910323:C:T	rs2968599	C	T	T	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr2	35954822	35954823	chr2:35954823:C:T	rs1620100	C	T	T	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr2	35963965	35963966	chr2:35963966:A:C	rs1510734	A	C	C	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr2	36059797	36059798	chr2:36059798:A:G	rs74488137	A	G	A	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr2	36171300	36171301	chr2:36171301:C:A	rs113389790	C	A	C	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr2	36235922	36235923	chr2:36235923:T:C	rs2699153	T	C	T	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr2	36240429	36240430	chr2:36240430:A:G	rs62132368	A	G	A	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr2	36355760	36355761	chr2:36355761:G:A	rs558967008	G	A	G	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr2	36380854	36380855	chr2:36380855:G:C	rs10195419	G	C	C	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr2	36485761	36485762	chr2:36485762:A:G	rs11893748	A	G	A	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr2	36656309	36656310	chr2:36656310:C:T	rs759431	C	T	T	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr2	37111170	37111171	chr2:37111171:C:T	rs6544054	C	T	C	Hoxd9.mouse_homeodomain_1	3	1	-	7.075409217893736	8.409487817756228	CCCGTTAAA
chr2	37150241	37150242	chr2:37150242:C:G	rs74446706	C	G	G	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr2	37180034	37180035	chr2:37180035:A:G	rs4374352	A	G	G	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr2	37312805	37312806	chr2:37312806:T:C	rs13399143	T	C	T	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr2	37391542	37391543	chr2:37391543:C:T	rs78914393	C	T	C	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr2	37605186	37605187	chr2:37605187:T:G	rs7605481	T	G	G	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr2	37733469	37733470	chr2:37733470:A:T	rs17511102	A	T	A	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr2	37735041	37735042	chr2:37735042:A:T	rs144915583	A	T	A	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr2	37783036	37783037	chr2:37783037:C:T	rs143755223	C	T	C	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr2	37819254	37819255	chr2:37819255:G:A	rs150681175	G	A	G	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr2	37827953	37827954	chr2:37827954:G:A	rs10495875	G	A	G	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr2	37836498	37836499	chr2:37836499:G:A	rs6744279	G	A	G	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr2	37898892	37898893	chr2:37898893:A:G	rs1430025	A	G	A	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr2	38045806	38045807	chr2:38045807:G:A	rs62136319	G	A	A	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr2	38093974	38093975	chr2:38093975:A:T	rs141932440	A	T	A	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr2	38094009	38094010	chr2:38094010:T:C	rs58632368	T	C	T	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr2	38128687	38128688	chr2:38128688:C:T	rs1478361	C	T	C	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr2	38293617	38293618	chr2:38293618:G:C	rs892211042	G	C	G	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr2	38535148	38535149	chr2:38535149:C:T	rs6544167	C	T	C	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr2	38651148	38651149	chr2:38651149:T:C	rs13421362	T	C	c	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr2	38664244	38664245	chr2:38664245:T:C	rs12478924	T	C	t	Hoxd9.mouse_homeodomain_1	3	1	-	7.212456609225008	5.878378009362515	GCCATAAAG
chr2	38664263	38664264	chr2:38664264:A:T	rs6761563	A	T	t	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr2	38698565	38698566	chr2:38698566:G:T	rs13413726	G	T	G	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr2	39202763	39202764	chr2:39202764:T:C	rs60143052	T	C	T	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr2	39321569	39321570	chr2:39321570:C:G	rs11692422	C	G	C	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr2	39431495	39431496	chr2:39431496:C:A	rs6758596	C	A	C	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr2	39512232	39512233	chr2:39512233:T:C	rs56692508	T	C	T	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr2	39513662	39513663	chr2:39513663:G:T	rs7577879	G	T	G	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr2	39620376	39620377	chr2:39620377:C:A	rs2716705	C	A	A	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr2	39620402	39620403	chr2:39620403:C:T	rs7582507	C	T	T	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr2	39664437	39664438	chr2:39664438:T:A	rs74781408	T	A	T	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr2	39697402	39697403	chr2:39697403:T:G	rs1009330296	T	G	T	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr2	39723679	39723680	chr2:39723680:A:C	rs137998129	A	C	A	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr2	39739484	39739485	chr2:39739485:C:T	rs577823893	C	T	C	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr2	39777108	39777109	chr2:39777109:C:T	rs10169390	C	T	C	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr2	39908965	39908966	chr2:39908966:C:T	rs10174831	C	T	T	Hoxd9.mouse_homeodomain_1	0	1	+	7.522691831404475	5.628144526095533	CCCATAAAG
chr2	40032638	40032639	chr2:40032639:C:A	rs2215979	C	A	A	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr2	40049951	40049952	chr2:40049952:A:T	rs7576153	A	T	T	Hoxd9.mouse_homeodomain_1	8	1	+	7.9772278588234515	5.044714734057384	GCAATAAAA
chr2	40049967	40049968	chr2:40049968:C:T	rs560314035	C	T	C	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr2	40096723	40096724	chr2:40096724:A:G	rs13432990	A	G	A	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr2	40143342	40143343	chr2:40143343:G:A	rs6746919	G	A	G	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr2	40166082	40166083	chr2:40166083:G:C	rs440056	G	C	C	Hoxd9.mouse_homeodomain_1	0	1	+	7.9772278588234515	8.287463081002919	GCAATAAAA
chr2	40168937	40168938	chr2:40168938:C:T	rs404005	C	T	T	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr2	40401763	40401764	chr2:40401764:C:T	rs4362610	C	T	T	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr2	40434657	40434658	chr2:40434658:C:A	rs17026005	C	A	C	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr2	40467345	40467346	chr2:40467346:C:T	rs4952415	C	T	T	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr2	40563254	40563255	chr2:40563255:T:C	rs6717750	T	C	T	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr2	40625811	40625812	chr2:40625812:T:A	rs1990618	T	A	A	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr2	40625839	40625840	chr2:40625840:C:T	rs72800390	C	T	C	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr2	40687693	40687694	chr2:40687694:G:C	rs17026480	G	C	G	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr2	40730265	40730266	chr2:40730266:G:C	rs62139542	G	C	G	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr2	40737325	40737326	chr2:40737326:T:C	rs6544354	T	C	C	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr2	40759578	40759579	chr2:40759579:G:A	rs58596943	G	A	A	Hoxd9.mouse_homeodomain_1	2	1	-	7.889898683853121	1.4024582262294842	ACCATAAAA
chr2	41112094	41112095	chr2:41112095:G:T	rs185643113	G	T	G	Hoxd9.mouse_homeodomain_1	2	1	-	7.716978748812629	7.0154228899258175	GACATAAAA
chr2	41338800	41338801	chr2:41338801:A:C	rs7557547	A	C	c	Hoxd9.mouse_homeodomain_1	5	1	+	7.9772278588234515	6.079920306263457	GCAATAAAA
chr2	41376533	41376534	chr2:41376534:T:C	rs2068390	T	C	C	Hoxd9.mouse_homeodomain_1	5	1	-	7.9772278588234515	1.603038140576896	GCAATAAAA
chr2	41409589	41409590	chr2:41409590:G:C	rs4952362	G	C	G	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr2	41498858	41498859	chr2:41498859:T:A	rs2374285	T	A	T	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr2	41509787	41509788	chr2:41509788:A:G	rs34985150	A	G	A	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr2	41613149	41613150	chr2:41613150:G:A	rs1805227	G	A	G	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr2	41903599	41903600	chr2:41903600:G:A	rs11687338	G	A	A	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr2	41907959	41907960	chr2:41907960:T:C	rs17772527	T	C	C	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr2	41988223	41988224	chr2:41988224:G:C	rs13024066	G	C	G	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr2	42036028	42036029	chr2:42036029:A:G	rs4952569	A	G	G	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr2	42086067	42086068	chr2:42086068:G:A	rs79684646	G	A	G	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr2	42224413	42224414	chr2:42224414:C:T	rs2118888	C	T	T	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr2	42224542	42224543	chr2:42224543:C:A	rs2118889	C	A	C	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr2	42249494	42249495	chr2:42249495:T:C	rs11688572	T	C	T	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr2	42298167	42298168	chr2:42298168:G:A	rs6544538	G	A	A	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr2	42410916	42410917	chr2:42410917:T:C	rs222471	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.678783717710262	7.34470511784777	GCCATAAAA
chr2	42649735	42649736	chr2:42649736:T:A	rs6544583	T	A	A	Hoxd9.mouse_homeodomain_1	6	1	-	7.522691831404475	4.633276061373889	CCCATAAAG
chr2	42745779	42745780	chr2:42745780:G:A	rs74829220	G	A	G	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr2	42752865	42752866	chr2:42752866:A:G	rs77598035	A	G	A	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr2	42813436	42813437	chr2:42813437:C:A	rs1371404	C	A	A	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr2	42831980	42831981	chr2:42831981:C:G	rs2119016	C	G	C	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr2	42910738	42910739	chr2:42910739:G:C	rs4420751	G	C	G	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr2	42913512	42913513	chr2:42913513:T:C	rs6719452	T	C	T	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr2	42929150	42929151	chr2:42929151:C:T	rs72803819	C	T	C	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr2	42929185	42929186	chr2:42929186:C:T	rs7575971	C	T	C	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr2	43010488	43010489	chr2:43010489:T:C	rs77216823	T	C	T	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr2	43155211	43155212	chr2:43155212:G:A	rs11124919	G	A	A	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr2	43218137	43218138	chr2:43218138:G:T	chr2:43218138:G:T	G	T	G	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr2	43230123	43230124	chr2:43230124:G:A	rs745314393	G	A	G	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr2	43301879	43301880	chr2:43301880:G:A	rs575075045	G	A	G	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr2	43305640	43305641	chr2:43305641:A:C	rs34247383	A	C	A	Hoxd9.mouse_homeodomain_1	8	1	+	8.98901893988973	7.45645131454733	CCCATAAAA
chr2	43310869	43310870	chr2:43310870:T:G	rs11688178	T	G	T	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr2	43311679	43311680	chr2:43311680:G:T	rs13405434	G	T	G	Hoxd9.mouse_homeodomain_1	0	1	+	8.678783717710262	7.094471634580788	GCCATAAAA
chr2	43328366	43328367	chr2:43328367:T:C	rs4340576	T	C	C	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr2	43363343	43363344	chr2:43363344:C:T	rs146469603	C	T	C	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr2	43490510	43490511	chr2:43490511:T:C	rs6746064	T	C	C	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr2	43567936	43567937	chr2:43567937:T:A	rs6544673	T	A	T	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr2	43829401	43829402	chr2:43829402:A:G	rs4148183	A	G	A	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr2	44005494	44005495	chr2:44005495:C:T	rs10084398	C	T	T	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr2	44091370	44091371	chr2:44091371:C:A	rs12612469	C	A	C	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr2	44136335	44136336	chr2:44136336:A:G	rs34189067	A	G	A	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr2	44577355	44577356	chr2:44577356:T:C	rs4953108	T	C	C	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr2	44655863	44655864	chr2:44655864:G:A	rs1445917427	G	A	G	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr2	44668472	44668473	chr2:44668473:G:A	rs57896377	G	A	a	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr2	44805436	44805437	chr2:44805437:C:G	rs868225364	C	G	C	Hoxd9.mouse_homeodomain_1	1	1	+	8.409487817756228	1.9999545889738628	CCCATTAAA
chr2	44847282	44847283	chr2:44847283:C:A	rs577789800	C	A	C	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr2	44895382	44895383	chr2:44895383:C:G	rs17039165	C	G	C	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr2	45069773	45069774	chr2:45069774:C:T	rs11685742	C	T	C	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr2	45210838	45210839	chr2:45210839:T:C	rs6760793	T	C	T	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr2	45210863	45210864	chr2:45210864:G:C	rs58627708	G	C	G	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr2	45213153	45213154	chr2:45213154:T:C	rs112869090	T	C	T	Hoxd9.mouse_homeodomain_1	0	1	-	7.889898683853121	8.678783717710262	ACCATAAAA
chr2	45233469	45233470	chr2:45233470:A:G	rs141033436	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	7.091711387329735	5.757632787467242	CCCATCAAA
chr2	45344508	45344509	chr2:45344509:T:C	rs13029877	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.716978748812629	6.382900148950135	GACATAAAA
chr2	45344563	45344564	chr2:45344564:G:A	rs6760244	G	A	A	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr2	45466104	45466105	chr2:45466105:C:T	rs6544821	C	T	T	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr2	45606809	45606810	chr2:45606810:C:T	rs79961829	C	T	C	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr2	45681998	45681999	chr2:45681999:C:G	rs137941330	C	G	C	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr2	45806458	45806459	chr2:45806459:G:A	rs7591885	G	A	A	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr2	45842415	45842416	chr2:45842416:A:G	rs61763781	A	G	G	Hoxd9.mouse_homeodomain_1	3	1	+	8.678783717710262	7.34470511784777	GCCATAAAA
chr2	45920574	45920575	chr2:45920575:G:A	rs74889586	G	A	G	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr2	46063317	46063318	chr2:46063318:C:G	rs916617186	C	G	C	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr2	46076514	46076515	chr2:46076515:G:A	rs113434434	G	A	G	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr2	46158831	46158832	chr2:46158832:A:G	rs6742742	A	G	G	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr2	46210203	46210204	chr2:46210204:A:G	rs72793680	A	G	A	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr2	46259604	46259605	chr2:46259605:T:C	rs1048477882	T	C	T	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr2	46328530	46328531	chr2:46328531:T:C	rs10208823	T	C	C	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr2	46471291	46471292	chr2:46471292:A:T	rs13020043	A	T	a	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr2	46481764	46481765	chr2:46481765:A:G	rs113303664	A	G	G	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr2	46503000	46503001	chr2:46503001:A:T	rs6719900	A	T	T	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr2	46513518	46513519	chr2:46513519:C:A	rs13018039	C	A	A	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr2	46609402	46609403	chr2:46609403:A:T	rs35682608	A	T	A	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr2	46831545	46831546	chr2:46831546:C:T	rs7586639	C	T	C	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr2	46972031	46972032	chr2:46972032:G:A	rs72806538	G	A	G	Hoxd9.mouse_homeodomain_1	2	1	-	8.099252595576761	1.6118121379531245	GCCATTAAA
chr2	47119674	47119675	chr2:47119675:G:A	rs75304043	G	A	a	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr2	47175287	47175288	chr2:47175288:G:A	rs1532467	G	A	G	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr2	47175289	47175290	chr2:47175290:G:A	rs113891485	G	A	G	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr2	47192226	47192227	chr2:47192227:A:T	rs59309265	A	T	A	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr2	47694287	47694288	chr2:47694288:T:C	rs72875064	T	C	C	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr2	47721713	47721714	chr2:47721714:G:A	rs797694	G	A	A	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr2	48109955	48109956	chr2:48109956:C:T	rs12053194	C	T	C	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr2	48173025	48173026	chr2:48173026:T:A	rs4146604	T	A	T	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr2	48174567	48174568	chr2:48174568:A:G	rs4953557	A	G	a	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr2	48185378	48185379	chr2:48185379:T:C	chr2:48185379:T:C	T	C	T	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr2	48219831	48219832	chr2:48219832:G:T	rs62137436	G	T	G	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr2	48248821	48248822	chr2:48248822:T:C	rs17037218	T	C	T	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr2	48400816	48400817	chr2:48400817:T:C	rs10191938	T	C	T	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr2	48673911	48673912	chr2:48673912:C:T	rs28666758	C	T	C	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr2	48853794	48853795	chr2:48853795:G:T	rs56012105	G	T	T	Hoxd9.mouse_homeodomain_1	1	1	-	7.654940340027237	6.693135371129603	CCCGTAAAA
chr2	48954331	48954332	chr2:48954332:G:A	rs6545085	G	A	A	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr2	49043107	49043108	chr2:49043108:G:A	rs56818892	G	A	A	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr2	49170914	49170915	chr2:49170915:A:T	rs7604822	A	T	A	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr2	49374053	49374054	chr2:49374054:T:C	rs34412180	T	C	T	Hoxd9.mouse_homeodomain_1	5	1	-	8.287463081002919	1.9132733627563638	CCAATAAAA
chr2	49583291	49583292	chr2:49583292:G:C	rs77712672	G	C	G	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr2	49666443	49666444	chr2:49666444:A:G	rs142499949	A	G	A	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr2	49753596	49753597	chr2:49753597:A:G	rs11902095	A	G	A	Hoxd9.mouse_homeodomain_1	0	1	+	7.889898683853121	8.678783717710262	ACCATAAAA
chr2	50585752	50585753	chr2:50585753:T:G	rs7584604	T	G	G	Hoxd9.mouse_homeodomain_1	8	1	-	7.091711387329735	5.559143761987334	CCCATCAAA
chr2	50966720	50966721	chr2:50966721:G:A	rs7608415	G	A	G	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr2	50995968	50995969	chr2:50995969:C:T	rs888242	C	T	T	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr2	51036982	51036983	chr2:51036983:G:A	rs10173781	G	A	A	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr2	51287496	51287497	chr2:51287497:T:A	rs11899309	T	A	T	Hoxd9.mouse_homeodomain_1	8	1	-	8.287463081002919	5.354949956236852	CCAATAAAA
chr2	51287520	51287521	chr2:51287521:T:C	rs2216133	T	C	C	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr2	51350041	51350042	chr2:51350042:G:A	rs62142936	G	A	A	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr2	51425176	51425177	chr2:51425177:A:T	rs72887312	A	T	A	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr2	51472950	51472951	chr2:51472951:G:A	rs17862672	G	A	A	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr2	52336240	52336241	chr2:52336241:A:G	rs17730780	A	G	A	Hoxd9.mouse_homeodomain_1	8	1	+	8.027213970992095	6.560886862506841	CACATAAAA
chr2	52414468	52414469	chr2:52414469:T:A	rs12613150	T	A	T	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr2	52585019	52585020	chr2:52585020:A:C	rs72884207	A	C	A	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr2	52706808	52706809	chr2:52706809:T:G	rs7592150	T	G	T	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr2	52706813	52706814	chr2:52706814:T:C	rs7592153	T	C	T	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr2	52749367	52749368	chr2:52749368:G:T	rs10201166	G	T	G	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr2	53019018	53019019	chr2:53019019:A:G	chr2:53019019:A:G	A	G	A	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr2	53189116	53189117	chr2:53189117:C:T	rs1559631	C	T	T	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr2	53313555	53313556	chr2:53313556:A:C	rs11895925	A	C	A	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr2	53381667	53381668	chr2:53381668:A:C	rs6716725	A	C	C	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr2	53631252	53631253	chr2:53631253:T:C	rs10201894	T	C	T	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr2	53767355	53767356	chr2:53767356:A:G	rs3755114	A	G	A	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr2	53820294	53820295	chr2:53820295:G:A	rs2542574	G	A	A	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr2	53859384	53859385	chr2:53859385:G:C	rs77003685	G	C	G	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr2	53859395	53859396	chr2:53859396:G:C	rs115725196	G	C	G	Hoxd9.mouse_homeodomain_1	1	1	-	7.091711387329735	0.6821781585473693	CCCATCAAA
chr2	53882101	53882102	chr2:53882102:A:G	rs6713523	A	G	A	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr2	54000212	54000213	chr2:54000213:C:T	rs72904915	C	T	C	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr2	54208836	54208837	chr2:54208837:T:C	rs17045642	T	C	T	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr2	54272206	54272207	chr2:54272207:A:G	rs843740	A	G	A	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr2	54287641	54287642	chr2:54287642:C:T	rs77644820	C	T	c	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr2	54416640	54416641	chr2:54416641:G:A	rs4671215	G	A	A	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr2	54479725	54479726	chr2:54479726:A:G	rs567042953	A	G	A	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr2	54590545	54590546	chr2:54590546:A:G	rs6545432	A	G	A	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr2	54619262	54619263	chr2:54619263:A:G	rs2941592	A	G	A	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr2	54634249	54634250	chr2:54634250:G:C	rs79439975	G	C	G	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr2	54640403	54640404	chr2:54640404:C:A	rs2941582	C	A	C	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr2	54724211	54724212	chr2:54724212:T:C	rs76162628	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.212456609225008	5.878378009362515	GCCATAAAG
chr2	54905662	54905663	chr2:54905663:C:T	rs13382720	C	T	C	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr2	54909388	54909389	chr2:54909389:A:G	rs17046484	A	G	A	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr2	54975512	54975513	chr2:54975513:C:T	rs2588522	C	T	T	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr2	54988688	54988689	chr2:54988689:G:A	rs2580771	G	A	A	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr2	55073420	55073421	chr2:55073421:G:A	rs77615381	G	A	G	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr2	55102416	55102417	chr2:55102417:A:C	rs1223826347	A	C	A	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr2	55139242	55139243	chr2:55139243:G:A	rs72797535	G	A	G	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr2	55168732	55168733	chr2:55168733:G:C	rs761537292	G	C	G	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr2	55530802	55530803	chr2:55530803:G:A	rs12987272	G	A	G	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr2	55616157	55616158	chr2:55616158:T:C	rs1084522	T	C	T	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr2	55659735	55659736	chr2:55659736:G:A	rs6725101	G	A	G	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr2	55695794	55695795	chr2:55695795:C:T	rs782585	C	T	c	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr2	55695818	55695819	chr2:55695819:T:G	rs12467339	T	G	t	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr2	55907896	55907897	chr2:55907897:T:C	rs4318427	T	C	T	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr2	55948142	55948143	chr2:55948143:T:A	rs6732479	T	A	A	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr2	55978688	55978689	chr2:55978689:C:T	rs11686318	C	T	C	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr2	56195844	56195845	chr2:56195845:T:C	rs6728383	T	C	T	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr2	56485920	56485921	chr2:56485921:A:C	rs2033014	A	C	A	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr2	56531920	56531921	chr2:56531921:C:T	rs372690749	C	T	C	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr2	56821604	56821605	chr2:56821605:A:G	rs4561703	A	G	A	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr2	57232572	57232573	chr2:57232573:G:T	rs114432806	G	T	T	Hoxd9.mouse_homeodomain_1	3	1	+	7.654940340027237	6.985537803081085	CCCGTAAAA
chr2	57432773	57432774	chr2:57432774:T:C	rs1374498318	T	C	T	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr2	57576408	57576409	chr2:57576409:T:C	rs10173101	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.027213970992095	6.693135371129603	CACATAAAA
chr2	57598892	57598893	chr2:57598893:G:A	rs11125721	G	A	G	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr2	57601278	57601279	chr2:57601279:C:A	rs57173959	C	A	C	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr2	57880701	57880702	chr2:57880702:A:G	rs17049220	A	G	A	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr2	57882408	57882409	chr2:57882409:C:A	rs952764	C	A	C	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr2	57892827	57892828	chr2:57892828:G:A	rs77843640	G	A	G	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr2	58107733	58107734	chr2:58107734:A:G	rs17049343	A	G	G	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr2	58228536	58228537	chr2:58228537:A:C	rs6761301	A	C	C	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr2	58614706	58614707	chr2:58614707:G:A	rs12616216	G	A	G	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr2	58644922	58644923	chr2:58644923:A:G	rs7591633	A	G	G	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr2	58795074	58795075	chr2:58795075:A:G	rs17616642	A	G	A	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr2	59033844	59033845	chr2:59033845:T:G	chr2:59033845:T:G	T	G	T	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr2	59144173	59144174	chr2:59144174:C:T	rs183984286	C	T	C	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr2	59406722	59406723	chr2:59406723:T:C	rs4672288	T	C	C	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr2	59484028	59484029	chr2:59484029:C:T	rs17585362	C	T	C	Hoxd9.mouse_homeodomain_1	2	1	+	7.241935125048919	0.7544946674252814	CCCATACAA
chr2	59484029	59484030	chr2:59484030:A:G	rs149537234	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	7.241935125048919	5.907856525186427	CCCATACAA
chr2	59586357	59586358	chr2:59586358:T:C	rs17050279	T	C	T	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr2	59587925	59587926	chr2:59587926:G:T	rs728343	G	T	G	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr2	59810430	59810431	chr2:59810431:T:C	rs6724702	T	C	C	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr2	59936275	59936276	chr2:59936276:T:G	rs1050052216	T	G	T	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr2	60181169	60181170	chr2:60181170:C:A	rs7585504	C	A	A	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr2	60209894	60209895	chr2:60209895:A:G	rs6757117	A	G	A	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr2	60271398	60271399	chr2:60271399:A:G	rs4671384	A	G	A	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr2	60322508	60322509	chr2:60322509:A:T	rs7579322	A	T	T	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr2	60408556	60408557	chr2:60408557:T:C	rs7586253	T	C	C	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr2	60440072	60440073	chr2:60440073:A:G	rs71541915	A	G	A	Hoxd9.mouse_homeodomain_1	4	1	-	7.1462160923678635	4.491169447505284	GCCATAAAC
chr2	60441848	60441849	chr2:60441849:T:G	rs1401205513	T	G	T	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr2	60470518	60470519	chr2:60470519:C:A	rs4672393	C	A	A	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr2	60543318	60543319	chr2:60543319:C:T	rs6739994	C	T	T	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr2	60670823	60670824	chr2:60670824:G:A	rs72893605	G	A	G	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr2	60707547	60707548	chr2:60707548:T:C	rs13414204	T	C	C	Hoxd9.mouse_homeodomain_1	4	1	+	7.241935125048919	4.5868884801863405	CCCATACAA
chr2	60731151	60731152	chr2:60731152:G:A	rs6710364	G	A	G	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr2	60752811	60752812	chr2:60752812:A:G	rs12991375	A	G	a	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr2	61359317	61359318	chr2:61359318:G:C	rs1378676958	G	C	G	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr2	61854639	61854640	chr2:61854640:T:C	rs1189009693	T	C	T	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr2	61854677	61854678	chr2:61854678:G:A	rs181576668	G	A	G	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr2	62065482	62065483	chr2:62065483:C:G	rs75338358	C	G	C	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr2	62147998	62147999	chr2:62147999:G:A	rs1185427359	G	A	G	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr2	62148008	62148009	chr2:62148009:C:T	rs7562287	C	T	T	Hoxd9.mouse_homeodomain_1	2	1	+	7.45645131454733	0.9690108569236928	CCCATAAAC
chr2	62299834	62299835	chr2:62299835:T:C	rs7424671	T	C	T	Hoxd9.mouse_homeodomain_1	1	1	-	8.027213970992095	2.5794857111073646	CACATAAAA
chr2	62664544	62664545	chr2:62664545:C:T	rs75738774	C	T	C	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr2	62685677	62685678	chr2:62685678:A:T	rs360787	A	T	A	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr2	63313188	63313189	chr2:63313189:A:G	rs1517403	A	G	A	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr2	63666929	63666930	chr2:63666930:A:G	rs2592386	A	G	G	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr2	63841628	63841629	chr2:63841629:T:G	rs914449802	T	G	T	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr2	64203647	64203648	chr2:64203648:G:C	rs115832541	G	C	C	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr2	64343876	64343877	chr2:64343877:G:T	rs10203643	G	T	G	Hoxd9.mouse_homeodomain_1	2	1	-	7.1462160923678635	6.444660233481052	GCCATAAAC
chr2	64370527	64370528	chr2:64370528:G:T	rs4671090	G	T	T	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr2	64439548	64439549	chr2:64439549:G:A	rs4671585	G	A	G	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr2	64494001	64494002	chr2:64494002:G:A	rs6759950	G	A	A	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr2	64634279	64634280	chr2:64634280:G:A	rs55651236	G	A	G	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr2	64888335	64888336	chr2:64888336:G:C	rs114129143	G	C	G	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr2	64946078	64946079	chr2:64946079:T:G	rs17612451	T	G	G	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr2	65084794	65084795	chr2:65084795:G:A	rs56155626	G	A	G	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr2	65126737	65126738	chr2:65126738:A:G	rs17753423	A	G	A	Hoxd9.mouse_homeodomain_1	6	1	+	8.409487817756228	1.7056618711644962	CCCATTAAA
chr2	65131194	65131195	chr2:65131195:G:T	rs2422437	G	T	T	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr2	65257308	65257309	chr2:65257309:A:G	rs10865349	A	G	A	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr2	65349673	65349674	chr2:65349674:C:A	rs150172739	C	A	C	Hoxd9.mouse_homeodomain_1	1	1	+	7.1462160923678635	6.184411123470229	GCCATAAAC
chr2	65351912	65351913	chr2:65351913:T:C	rs35315862	T	C	T	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr2	65439539	65439540	chr2:65439540:T:C	rs6752053	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.522691831404475	6.188613231541982	CCCATAAAG
chr2	65605242	65605243	chr2:65605243:C:A	rs840781	C	A	A	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr2	65663374	65663375	chr2:65663375:A:G	rs840775	A	G	A	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr2	65708022	65708023	chr2:65708023:C:T	rs17030670	C	T	T	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr2	65747098	65747099	chr2:65747099:G:C	rs6743531	G	C	C	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr2	65885259	65885260	chr2:65885260:G:A	rs990307	G	A	A	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr2	66364866	66364867	chr2:66364867:T:C	rs146144978	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.45645131454733	6.122372714684838	CCCATAAAC
chr2	66489459	66489460	chr2:66489460:C:T	rs7563565	C	T	C	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr2	66783215	66783216	chr2:66783216:G:A	rs17032536	G	A	G	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr2	66994605	66994606	chr2:66994606:C:A	rs7601922	C	A	A	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr2	67012937	67012938	chr2:67012938:C:T	rs60640373	C	T	C	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr2	67037831	67037832	chr2:67037832:G:T	rs2098390	G	T	T	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr2	67086779	67086780	chr2:67086780:A:C	rs71411975	A	C	A	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr2	67284178	67284179	chr2:67284179:T:G	rs143382697	T	G	T	Hoxd9.mouse_homeodomain_1	2	1	-	7.9772278588234515	8.678783717710262	GCAATAAAA
chr2	67284195	67284196	chr2:67284196:C:T	rs74576255	C	T	C	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr2	67446690	67446691	chr2:67446691:A:T	rs600579	A	T	A	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr2	67477585	67477586	chr2:67477586:G:A	rs141311741	G	A	G	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr2	67480164	67480165	chr2:67480165:G:A	rs62157869	G	A	G	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr2	67517260	67517261	chr2:67517261:C:A	rs13405060	C	A	C	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr2	67564105	67564106	chr2:67564106:A:G	rs143472922	A	G	A	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr2	67752424	67752425	chr2:67752425:G:A	rs139106997	G	A	G	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr2	68158822	68158823	chr2:68158823:C:T	rs6742014	C	T	T	Hoxd9.mouse_homeodomain_1	1	1	+	7.1462160923678635	5.831414178034855	GCCATAAAC
chr2	68223623	68223624	chr2:68223624:A:G	rs76823486	A	G	A	Hoxd9.mouse_homeodomain_1	6	1	+	7.9772278588234515	1.2734019122317202	GCAATAAAA
chr2	68236243	68236244	chr2:68236244:G:A	rs58503743	G	A	g	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr2	68364945	68364946	chr2:68364946:G:A	rs11889922	G	A	A	Hoxd9.mouse_homeodomain_1	1	1	-	8.287463081002919	6.972661166669912	CCAATAAAA
chr2	68452815	68452816	chr2:68452816:T:C	rs59042544	T	C	t	Hoxd9.mouse_homeodomain_1	0	1	-	7.889898683853121	8.678783717710262	ACCATAAAA
chr2	68715876	68715877	chr2:68715877:G:T	rs553707534	G	T	G	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr2	68716923	68716924	chr2:68716924:G:A	rs13034402	G	A	G	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr2	68925268	68925269	chr2:68925269:T:C	rs28655947	T	C	C	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr2	69011146	69011147	chr2:69011147:T:C	rs76854816	T	C	T	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr2	69011188	69011189	chr2:69011189:T:C	rs13396876	T	C	T	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr2	69020706	69020707	chr2:69020707:C:A	rs73934647	C	A	A	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr2	69046531	69046532	chr2:69046532:T:C	rs4255990	T	C	T	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr2	69058101	69058102	chr2:69058102:C:T	rs67716344	C	T	C	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr2	69450946	69450947	chr2:69450947:T:C	rs35681682	T	C	t	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr2	69490052	69490053	chr2:69490053:T:G	rs10185225	T	G	G	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr2	69770233	69770234	chr2:69770234:A:C	rs115632610	A	C	A	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr2	69791260	69791261	chr2:69791261:A:G	rs114744766	A	G	A	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr2	69791261	69791262	chr2:69791262:G:A	rs76418195	G	A	G	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr2	69818352	69818353	chr2:69818353:G:T	rs115818636	G	T	G	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr2	69836640	69836641	chr2:69836641:G:A	rs4853040	G	A	A	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr2	70127921	70127922	chr2:70127922:A:C	rs72841125	A	C	A	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr2	70372208	70372209	chr2:70372209:A:G	rs559053286	A	G	A	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr2	70448574	70448575	chr2:70448575:T:G	rs11466297	T	G	T	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr2	70748879	70748880	chr2:70748880:T:A	rs3771409	T	A	A	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr2	70779256	70779257	chr2:70779257:T:C	rs2024454	T	C	A	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr2	70785025	70785026	chr2:70785026:T:C	rs138351131	T	C	T	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr2	70827967	70827968	chr2:70827968:G:C	rs1544652	G	C	G	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr2	70971854	70971855	chr2:70971855:G:A	rs4852734	G	A	A	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr2	70985274	70985275	chr2:70985275:T:C	rs61732279	T	C	T	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr2	70985301	70985302	chr2:70985302:G:T	rs10460571	G	T	G	Hoxd9.mouse_homeodomain_1	8	1	+	7.522691831404475	6.056505815123662	CCCATAAAG
chr2	71067905	71067906	chr2:71067906:G:A	chr2:71067906:G:A	G	A	.	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr2	71067923	71067924	chr2:71067924:A:C	rs2287329	A	C	.	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr2	71244325	71244326	chr2:71244326:T:C	rs1870385	T	C	T	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr2	71498042	71498043	chr2:71498043:A:C	rs4309601	A	C	A	Hoxd9.mouse_homeodomain_1	6	1	+	8.287463081002919	6.540379266162109	CCAATAAAA
chr2	71689074	71689075	chr2:71689075:T:A	rs2589517	T	A	A	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr2	71803340	71803341	chr2:71803341:A:G	rs6726307	A	G	A	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr2	71995117	71995118	chr2:71995118:A:T	rs372684585	A	T	A	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr2	72076036	72076037	chr2:72076037:C:T	rs114423441	C	T	C	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr2	72091838	72091839	chr2:72091839:C:T	rs74794698	C	T	C	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr2	72548378	72548379	chr2:72548379:G:C	rs146035464	G	C	G	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr2	72579658	72579659	chr2:72579659:A:C	rs1054309295	A	C	A	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr2	72891264	72891265	chr2:72891265:A:C	chr2:72891265:A:C	A	C	A	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr2	73000186	73000187	chr2:73000187:C:G	rs150069007	C	G	C	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr2	73007202	73007203	chr2:73007203:C:G	rs73943036	C	G	C	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr2	73344288	73344289	chr2:73344289:G:A	rs7604588	G	A	A	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr2	73426203	73426204	chr2:73426204:T:C	rs6740223	T	C	T	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr2	73487988	73487989	chr2:73487989:A:G	rs802113	A	G	G	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr2	73839333	73839334	chr2:73839334:G:A	rs1474335	G	A	G	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr2	74013509	74013510	chr2:74013510:C:T	rs6714186	C	T	C	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr2	74032913	74032914	chr2:74032914:T:C	chr2:74032914:T:C	T	C	T	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr2	74056600	74056601	chr2:74056601:C:T	rs6745236	C	T	T	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr2	74058113	74058114	chr2:74058114:T:C	rs115543617	T	C	T	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr2	74096372	74096373	chr2:74096373:G:A	rs828869	G	A	G	Hoxd9.mouse_homeodomain_1	0	1	+	8.678783717710262	7.889898683853121	GCCATAAAA
chr2	75226462	75226463	chr2:75226463:G:A	rs7605539	G	A	A	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr2	75239414	75239415	chr2:75239415:T:C	rs544713599	T	C	T	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr2	75247167	75247168	chr2:75247168:T:A	rs17010950	T	A	T	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr2	75310138	75310139	chr2:75310139:G:A	chr2:75310139:G:A	G	A	G	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr2	76416018	76416019	chr2:76416019:C:T	rs114682414	C	T	C	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr2	76694001	76694002	chr2:76694002:T:G	rs11682344	T	G	t	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr2	76694025	76694026	chr2:76694026:G:T	rs11676499	G	T	G	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr2	76978364	76978365	chr2:76978365:T:C	rs78911088	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.9772278588234515	6.643149258960959	GCAATAAAA
chr2	77829586	77829587	chr2:77829587:A:G	rs59876302	A	G	A	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr2	78363416	78363417	chr2:78363417:A:G	rs7606174	A	G	G	Hoxd9.mouse_homeodomain_1	5	1	+	7.9772278588234515	1.603038140576896	GCAATAAAA
chr2	78411151	78411152	chr2:78411152:T:C	rs34050937	T	C	T	Hoxd9.mouse_homeodomain_1	8	1	-	7.9772278588234515	6.510900750338196	GCAATAAAA
chr2	79132747	79132748	chr2:79132748:G:A	rs17753959	G	A	.	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr2	79857227	79857228	chr2:79857228:A:G	rs12477220	A	G	A	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr2	79965402	79965403	chr2:79965403:A:T	rs6743663	A	T	A	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr2	80225494	80225495	chr2:80225495:G:T	rs6712718	G	T	G	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr2	80306673	80306674	chr2:80306674:A:G	rs141551875	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	7.1462160923678635	5.81213749250537	GCCATAAAC
chr2	80529175	80529176	chr2:80529176:T:C	rs17340143	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.287463081002919	6.953384481140425	CCAATAAAA
chr2	81622598	81622599	chr2:81622599:C:T	rs80320422	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	+	8.027213970992095	6.132666665683155	CACATAAAA
chr2	81839994	81839995	chr2:81839995:C:T	rs4852641	C	T	c	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr2	82155682	82155683	chr2:82155683:T:C	rs12464437	T	C	T	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr2	82305748	82305749	chr2:82305749:C:T	rs56108737	C	T	T	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr2	83053903	83053904	chr2:83053904:A:G	rs115918153	A	G	A	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr2	83082091	83082092	chr2:83082092:A:C	chr2:83082092:A:C	A	C	A	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr2	83121912	83121913	chr2:83121913:C:A	rs28422877	C	A	c	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr2	83343139	83343140	chr2:83343140:C:T	rs11126911	C	T	T	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr2	83368922	83368923	chr2:83368923:G:A	rs116837964	G	A	a	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr2	83546937	83546938	chr2:83546938:C:A	rs113527045	C	A	C	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr2	83567999	83568000	chr2:83568000:A:G	rs9309603	A	G	a	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr2	83651139	83651140	chr2:83651140:A:T	rs6758461	A	T	A	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr2	84866366	84866367	chr2:84866367:A:G	rs72836497	A	G	A	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr2	85195869	85195870	chr2:85195870:A:C	rs747078	A	C	A	Hoxd9.mouse_homeodomain_1	5	1	+	7.889898683853121	5.992591131293127	ACCATAAAA
chr2	85411199	85411200	chr2:85411200:A:G	rs11682055	A	G	G	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr2	85413543	85413544	chr2:85413544:C:T	rs142573475	C	T	C	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr2	85413549	85413550	chr2:85413550:A:T	rs146505632	A	T	A	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr2	85585660	85585661	chr2:85585661:T:A	rs62166769	T	A	A	Hoxd9.mouse_homeodomain_1	8	1	-	8.287463081002919	5.354949956236852	CCAATAAAA
chr2	85828926	85828927	chr2:85828927:A:G	rs35210068	A	G	A	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr2	85852005	85852006	chr2:85852006:T:G	rs17026684	T	G	T	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr2	85949100	85949101	chr2:85949101:G:A	rs6747424	G	A	A	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr2	85949134	85949135	chr2:85949135:T:C	rs6705122	T	C	T	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr2	85987935	85987936	chr2:85987936:T:C	rs4480982	T	C	C	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr2	85987976	85987977	chr2:85987977:C:T	rs4346389	C	T	C	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr2	86014866	86014867	chr2:86014867:C:T	rs78929944	C	T	C	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr2	86186495	86186496	chr2:86186496:C:T	chr2:86186496:C:T	C	T	C	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr2	86228742	86228743	chr2:86228743:T:C	rs56112603	T	C	T	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr2	86393171	86393172	chr2:86393172:G:A	rs58740162	G	A	A	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr2	86443950	86443951	chr2:86443951:T:C	rs56263644	T	C	T	Hoxd9.mouse_homeodomain_1	5	1	-	8.027213970992095	1.6530242527455408	CACATAAAA
chr2	86443957	86443958	chr2:86443958:T:C	rs79242249	T	C	T	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr2	86564380	86564381	chr2:86564381:T:C	rs77118017	T	C	T	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr2	86599147	86599148	chr2:86599148:T:C	rs56378606	T	C	T	Hoxd9.mouse_homeodomain_1	5	1	-	7.9772278588234515	1.603038140576896	GCAATAAAA
chr2	86851434	86851435	chr2:86851435:G:T	rs7565893	G	T	T	Hoxd9.mouse_homeodomain_1	2	1	-	7.889898683853121	7.188342824966311	ACCATAAAA
chr2	87476786	87476787	chr2:87476787:C:T	rs13402825	C	T	T	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr2	87500618	87500619	chr2:87500619:A:C	rs60782253	A	C	A	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr2	87586175	87586176	chr2:87586176:C:T	rs6547737	C	T	C	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr2	87825078	87825079	chr2:87825079:C:T	rs797007737	C	T	.	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr2	88071775	88071776	chr2:88071776:C:T	rs11682584	C	T	C	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr2	88471137	88471138	chr2:88471138:A:G	rs2015591	A	G	G	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr2	88729368	88729369	chr2:88729369:G:A	rs371893786	G	A	g	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr2	89762434	89762435	chr2:89762435:G:T	rs1264219803	G	T	.	Hoxd9.mouse_homeodomain_1	1	1	-	7.212456609225008	6.250651640327374	GCCATAAAG
chr2	89762452	89762453	chr2:89762453:G:T	rs1468216971	G	T	.	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr2	89763742	89763743	chr2:89763743:A:C	rs1485742850	A	C	.	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr2	89849035	89849036	chr2:89849036:C:G	rs576698157	C	G	.	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr2	90360378	90360379	chr2:90360379:C:T	rs71259223	C	T	c	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr2	90360568	90360569	chr2:90360569:C:G	rs796992165	C	G	c	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr2	91433938	91433939	chr2:91433939:C:T	rs556149	C	T	c	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr2	92599546	92599547	chr2:92599547:G:C	rs1201450940	G	C	.	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr2	92599567	92599568	chr2:92599568:C:A	rs1162571226	C	A	.	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr2	93002221	93002222	chr2:93002222:G:C	rs1408963733	G	C	.	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr2	93170826	93170827	chr2:93170827:A:G	rs1296441238	A	G	.	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr2	93235523	93235524	chr2:93235524:G:A	rs1454955149	G	A	.	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr2	93641833	93641834	chr2:93641834:A:C	rs1161703508	A	C	.	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr2	93680405	93680406	chr2:93680406:C:T	rs1467682070	C	T	.	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr2	93946090	93946091	chr2:93946091:A:G	rs1423079426	A	G	.	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr2	94519796	94519797	chr2:94519797:A:G	rs1362735103	A	G	.	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr2	94539922	94539923	chr2:94539923:T:A	rs1382134124	T	A	.	Hoxd9.mouse_homeodomain_1	5	1	-	8.027213970992095	7.447682848858594	CACATAAAA
chr2	94745206	94745207	chr2:94745207:C:A	rs34196616	C	A	-	Hoxd9.mouse_homeodomain_1	8	1	-	7.522691831404475	6.056505815123662	CCCATAAAG
chr2	95010692	95010693	chr2:95010693:C:T	rs10445976	C	T	c	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr2	95071932	95071933	chr2:95071933:T:C	rs11892003	T	C	-	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr2	95071933	95071934	chr2:95071934:A:C	rs4854244	A	C	-	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr2	95991611	95991612	chr2:95991612:G:A	rs115480888	G	A	g	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr2	96430775	96430776	chr2:96430776:C:T	rs76142129	C	T	C	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr2	96505399	96505400	chr2:96505400:C:T	rs185542479	C	T	C	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr2	96552627	96552628	chr2:96552628:G:A	rs772693379	G	A	G	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr2	96552629	96552630	chr2:96552630:A:G	rs6576973	A	G	A	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr2	96791276	96791277	chr2:96791277:G:T	rs62152781	G	T	G	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr2	96895175	96895176	chr2:96895176:C:T	rs4907206	C	T	C	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr2	96952834	96952835	chr2:96952835:C:T	rs1730130	C	T	C	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr2	97591466	97591467	chr2:97591467:T:C	rs56226039	T	C	t	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr2	97711411	97711412	chr2:97711412:A:G	rs17695937	A	G	A	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr2	97967111	97967112	chr2:97967112:C:T	rs62156523	C	T	C	Hoxd9.mouse_homeodomain_1	1	1	+	7.889898683853121	6.575096769520114	ACCATAAAA
chr2	97989518	97989519	chr2:97989519:A:G	rs11123974	A	G	A	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr2	98184259	98184260	chr2:98184260:A:G	rs11124071	A	G	G	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr2	98586544	98586545	chr2:98586545:A:G	rs3754874	A	G	G	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr2	98726449	98726450	chr2:98726450:A:G	rs181670884	A	G	A	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr2	98763671	98763672	chr2:98763672:C:A	rs72827713	C	A	c	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr2	98898207	98898208	chr2:98898208:C:G	rs925887	C	G	G	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr2	99673233	99673234	chr2:99673234:G:A	rs4384839	G	A	G	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr2	99690608	99690609	chr2:99690609:C:G	rs6761895	C	G	G	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr2	99771096	99771097	chr2:99771097:C:T	rs2309651	C	T	T	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr2	99999290	99999291	chr2:99999291:T:C	rs62149306	T	C	T	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr2	100019200	100019201	chr2:100019201:A:T	rs10198062	A	T	T	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr2	100144208	100144209	chr2:100144209:A:G	rs138707391	A	G	A	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr2	100284668	100284669	chr2:100284669:C:T	rs72821152	C	T	C	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr2	100365681	100365682	chr2:100365682:A:T	rs6542940	A	T	T	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr2	100456112	100456113	chr2:100456113:A:G	rs10192505	A	G	A	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr2	100674641	100674642	chr2:100674642:G:C	rs17024601	G	C	G	Hoxd9.mouse_homeodomain_1	2	1	-	7.716978748812629	4.248987091360299	GACATAAAA
chr2	100803424	100803425	chr2:100803425:T:C	rs1435510	T	C	T	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr2	100903286	100903287	chr2:100903287:C:G	rs80078472	C	G	C	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr2	101113630	101113631	chr2:101113631:T:G	rs67087164	T	G	T	Hoxd9.mouse_homeodomain_1	7	1	-	8.099252595576761	5.209836825546175	GCCATTAAA
chr2	101114934	101114935	chr2:101114935:C:T	rs700882	C	T	C	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr2	101161477	101161478	chr2:101161478:T:C	rs56380439	T	C	T	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr2	101254399	101254400	chr2:101254400:G:A	rs935067	G	A	A	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr2	101366140	101366141	chr2:101366141:G:A	rs6729593	G	A	G	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr2	101463161	101463162	chr2:101463162:A:C	rs11904192	A	C	A	Hoxd9.mouse_homeodomain_1	7	1	+	7.212456609225008	4.323040839194422	GCCATAAAG
chr2	101656434	101656435	chr2:101656435:T:C	rs10205340	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.027213970992095	6.693135371129603	CACATAAAA
chr2	101677730	101677731	chr2:101677731:A:G	rs34173109	A	G	A	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr2	101732191	101732192	chr2:101732192:G:C	rs10167410	G	C	G	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr2	101732214	101732215	chr2:101732215:T:C	rs3796062	T	C	C	Hoxd9.mouse_homeodomain_1	4	1	+	7.241935125048919	4.5868884801863405	CCCATACAA
chr2	102049090	102049091	chr2:102049091:C:A	rs7607548	C	A	A	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr2	102141475	102141476	chr2:102141476:A:G	rs36078571	A	G	A	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr2	102141491	102141492	chr2:102141492:T:A	rs35743441	T	A	T	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr2	102220204	102220205	chr2:102220205:A:T	rs17026825	A	T	A	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr2	102227372	102227373	chr2:102227373:G:A	rs13033782	G	A	G	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr2	102343546	102343547	chr2:102343547:G:A	rs12905	G	A	G	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr2	102350574	102350575	chr2:102350575:C:T	rs6543120	C	T	T	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr2	102351824	102351825	chr2:102351825:T:C	rs4988958	T	C	C	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr2	102418914	102418915	chr2:102418915:T:C	rs11465673	T	C	T	Hoxd9.mouse_homeodomain_1	6	1	-	7.716978748812629	1.0131528022208975	GACATAAAA
chr2	102460658	102460659	chr2:102460659:A:C	chr2:102460659:A:C	A	C	A	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr2	102623528	102623529	chr2:102623529:G:A	rs1008397	G	A	G	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr2	102984147	102984148	chr2:102984148:T:C	rs17028158	T	C	C	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr2	104316306	104316307	chr2:104316307:C:T	rs539685184	C	T	C	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr2	104316307	104316308	chr2:104316308:G:A	rs141573580	G	A	G	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr2	104702927	104702928	chr2:104702928:A:G	rs146409171	A	G	A	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr2	105006823	105006824	chr2:105006824:C:T	rs7608499	C	T	T	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr2	105291841	105291842	chr2:105291842:A:G	rs142403305	A	G	A	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr2	105456879	105456880	chr2:105456880:G:A	rs1518610	G	A	A	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr2	105456886	105456887	chr2:105456887:A:G	rs9308885	A	G	a	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr2	105494493	105494494	chr2:105494494:C:G	rs13423798	C	G	G	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr2	105508852	105508853	chr2:105508853:T:G	rs6729262	T	G	G	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr2	105510009	105510010	chr2:105510010:T:C	rs72819755	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.287463081002919	6.953384481140425	CCAATAAAA
chr2	105544114	105544115	chr2:105544115:A:C	rs11682178	A	C	A	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr2	105593518	105593519	chr2:105593519:A:G	rs77145358	A	G	A	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr2	105602885	105602886	chr2:105602886:T:A	rs3937667	T	A	T	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr2	105670875	105670876	chr2:105670876:A:G	rs11676769	A	G	A	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr2	105686019	105686020	chr2:105686020:T:C	rs79401192	T	C	T	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr2	105790036	105790037	chr2:105790037:G:T	chr2:105790037:G:T	G	T	G	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr2	105790215	105790216	chr2:105790216:T:C	rs746437	T	C	T	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr2	105799221	105799222	chr2:105799222:G:T	rs13392889	G	T	G	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr2	105852023	105852024	chr2:105852024:T:A	rs17031867	T	A	T	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr2	105883823	105883824	chr2:105883824:G:A	rs13426321	G	A	G	Hoxd9.mouse_homeodomain_1	2	1	-	8.409487817756228	1.922047360132591	CCCATTAAA
chr2	105930206	105930207	chr2:105930207:A:G	rs1863213	A	G	G	Hoxd9.mouse_homeodomain_1	4	1	-	7.889898683853121	5.234852038990543	ACCATAAAA
chr2	106028420	106028421	chr2:106028421:T:C	chr2:106028421:T:C	T	C	T	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr2	106047383	106047384	chr2:106047384:G:A	rs12151710	G	A	G	Hoxd9.mouse_homeodomain_1	1	1	-	7.1462160923678635	5.831414178034855	GCCATAAAC
chr2	106232925	106232926	chr2:106232926:C:T	rs12712247	C	T	c	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr2	106642581	106642582	chr2:106642582:G:C	rs12621185	G	C	C	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr2	106696080	106696081	chr2:106696081:T:C	rs11124128	T	C	T	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr2	106829612	106829613	chr2:106829613:T:C	rs6761869	T	C	T	Hoxd9.mouse_homeodomain_1	4	1	+	8.98901893988973	6.333972295027152	CCCATAAAA
chr2	106885288	106885289	chr2:106885289:C:T	rs34209723	C	T	C	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr2	106887912	106887913	chr2:106887913:G:T	rs10166025	G	T	T	Hoxd9.mouse_homeodomain_1	0	1	+	8.099252595576761	6.514940512447287	GCCATTAAA
chr2	106887939	106887940	chr2:106887940:G:A	rs10166084	G	A	A	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr2	106977595	106977596	chr2:106977596:C:T	rs76877317	C	T	C	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr2	107588471	107588472	chr2:107588472:G:A	rs72823044	G	A	G	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr2	107596614	107596615	chr2:107596615:C:T	rs10200620	C	T	T	Hoxd9.mouse_homeodomain_1	2	1	+	8.027213970992095	1.5397735133684596	CACATAAAA
chr2	107634261	107634262	chr2:107634262:G:A	rs9308801	G	A	A	Hoxd9.mouse_homeodomain_1	1	1	-	8.287463081002919	6.972661166669912	CCAATAAAA
chr2	107636254	107636255	chr2:107636255:C:T	rs1001082855	C	T	C	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr2	108032020	108032021	chr2:108032021:A:T	rs62148709	A	T	a	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr2	108232924	108232925	chr2:108232925:T:C	rs2378098	T	C	N	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr2	108413939	108413940	chr2:108413940:A:G	rs57269410	A	G	A	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr2	108447897	108447898	chr2:108447898:G:A	rs2683804	G	A	-	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr2	108450075	108450076	chr2:108450076:T:C	rs76428482	T	C	T	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr2	108633610	108633611	chr2:108633611:A:G	rs12468001	A	G	A	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr2	108633618	108633619	chr2:108633619:G:C	rs1471642595	G	C	G	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr2	108776320	108776321	chr2:108776321:C:G	rs1649328	C	G	G	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr2	108982799	108982800	chr2:108982800:G:A	rs260674	G	A	A	Hoxd9.mouse_homeodomain_1	3	1	+	7.654940340027237	8.98901893988973	CCCGTAAAA
chr2	109171885	109171886	chr2:109171886:C:T	rs891417	C	T	T	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr2	109214211	109214212	chr2:109214212:C:T	rs17035155	C	T	C	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr2	109214243	109214244	chr2:109214244:A:G	rs149229022	A	G	A	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr2	109216943	109216944	chr2:109216944:C:T	rs7355548	C	T	C	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr2	109217472	109217473	chr2:109217473:A:G	rs182969557	A	G	A	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr2	109301546	109301547	chr2:109301547:C:T	rs7601259	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	+	7.45645131454733	5.561904009238388	CCCATAAAC
chr2	109357987	109357988	chr2:109357988:A:G	rs6716113	A	G	G	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr2	109444653	109444654	chr2:109444654:C:G	rs72824754	C	G	C	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr2	109447459	109447460	chr2:109447460:G:T	rs141948666	G	T	g	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr2	109458945	109458946	chr2:109458946:G:A	rs7424652	G	A	G	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr2	109526987	109526988	chr2:109526988:G:C	rs10439552	G	C	G	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr2	110101761	110101762	chr2:110101762:A:T	rs574022672	A	T	A	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr2	111015792	111015793	chr2:111015793:A:G	rs1047832780	A	G	A	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr2	111098479	111098480	chr2:111098480:G:A	rs4533473	G	A	A	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr2	111198778	111198779	chr2:111198779:G:A	rs35520250	G	A	g	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr2	111249994	111249995	chr2:111249995:G:A	rs72837860	G	A	G	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr2	111250024	111250025	chr2:111250025:G:A	rs193031933	G	A	G	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr2	111319273	111319274	chr2:111319274:G:A	rs114241055	G	A	G	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr2	111496273	111496274	chr2:111496274:T:C	rs1345203	T	C	T	Hoxd9.mouse_homeodomain_1	6	1	-	7.889898683853121	1.18607273726139	ACCATAAAA
chr2	111496297	111496298	chr2:111496298:G:A	rs148535927	G	A	G	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr2	111530896	111530897	chr2:111530897:C:T	rs192945747	C	T	C	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr2	111535009	111535010	chr2:111535010:C:T	rs992372684	C	T	-	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr2	111535038	111535039	chr2:111535039:C:T	rs113904666	C	T	-	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr2	111602270	111602271	chr2:111602271:T:A	rs149220589	T	A	T	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr2	111624788	111624789	chr2:111624789:T:C	rs7583490	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.409487817756228	7.075409217893736	CCCATTAAA
chr2	111694659	111694660	chr2:111694660:C:T	rs13036086	C	T	T	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr2	111896137	111896138	chr2:111896138:C:T	rs72823469	C	T	-	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr2	112061438	112061439	chr2:112061439:G:A	rs4848982	G	A	G	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr2	112752129	112752130	chr2:112752130:A:T	chr2:112752130:A:T	A	T	a	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr2	112836809	112836810	chr2:112836810:G:A	rs1143627	G	A	G	Hoxd9.mouse_homeodomain_1	2	1	-	8.678783717710262	2.1913432600866263	GCCATAAAA
chr2	112980834	112980835	chr2:112980835:T:G	rs11683399	T	G	t	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr2	113077307	113077308	chr2:113077308:T:C	rs13389457	T	C	C	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr2	113103983	113103984	chr2:113103984:G:A	rs13406085	G	A	G	Hoxd9.mouse_homeodomain_1	1	1	-	8.678783717710262	7.363981803377255	GCCATAAAA
chr2	113117931	113117932	chr2:113117932:G:A	rs2234677	G	A	G	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr2	113117935	113117936	chr2:113117936:G:A	rs45526933	G	A	G	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr2	113241956	113241957	chr2:113241957:G:C	rs4849186	G	C	G	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr2	113284161	113284162	chr2:113284162:A:G	rs187005646	A	G	A	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr2	113329001	113329002	chr2:113329002:G:A	rs1191689	G	A	G	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr2	113336230	113336231	chr2:113336231:G:A	rs569704849	G	A	G	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr2	113387358	113387359	chr2:113387359:T:C	rs6728162	T	C	.	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr2	113941113	113941114	chr2:113941114:T:C	rs55959179	T	C	T	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr2	113969054	113969055	chr2:113969055:C:A	rs77742501	C	A	C	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr2	114506207	114506208	chr2:114506208:A:C	rs7420540	A	C	A	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr2	114773145	114773146	chr2:114773146:G:A	rs319856	G	A	A	Hoxd9.mouse_homeodomain_1	2	1	-	8.027213970992095	1.5397735133684596	CACATAAAA
chr2	116136358	116136359	chr2:116136359:C:T	rs62157609	C	T	C	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr2	116136371	116136372	chr2:116136372:C:T	rs75756505	C	T	C	Hoxd9.mouse_homeodomain_1	3	1	-	7.34470511784777	8.678783717710262	GCCGTAAAA
chr2	116251403	116251404	chr2:116251404:C:G	rs13425166	C	G	C	Hoxd9.mouse_homeodomain_1	1	1	+	7.1462160923678635	0.7366828635854974	GCCATAAAC
chr2	117794778	117794779	chr2:117794779:T:C	rs17047412	T	C	T	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr2	117961488	117961489	chr2:117961489:T:C	rs41470450	T	C	T	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr2	118090264	118090265	chr2:118090265:G:A	rs1352083	G	A	g	Hoxd9.mouse_homeodomain_1	2	1	-	7.34470511784777	0.8572646602241328	GCCGTAAAA
chr2	118124050	118124051	chr2:118124051:G:A	rs145739755	G	A	G	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr2	118124057	118124058	chr2:118124058:A:G	rs138206861	A	G	A	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr2	118251606	118251607	chr2:118251607:T:G	rs17047916	T	G	T	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr2	118373184	118373185	chr2:118373185:T:C	chr2:118373185:T:C	T	C	T	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr2	118527790	118527791	chr2:118527791:C:T	rs61641292	C	T	C	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr2	118723194	118723195	chr2:118723195:T:C	rs332099	T	C	C	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr2	118823503	118823504	chr2:118823504:T:C	rs10188733	T	C	C	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr2	118883819	118883820	chr2:118883820:G:A	rs1550310	G	A	g	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr2	119114019	119114020	chr2:119114020:T:C	rs78596651	T	C	C	Hoxd9.mouse_homeodomain_1	4	1	+	8.98901893988973	6.333972295027152	CCCATAAAA
chr2	119169925	119169926	chr2:119169926:C:G	rs113040968	C	G	C	Hoxd9.mouse_homeodomain_1	1	1	+	7.241935125048919	0.8324018962665533	CCCATACAA
chr2	119240638	119240639	chr2:119240639:C:T	rs838087	C	T	C	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr2	119377970	119377971	chr2:119377971:C:G	rs555013148	C	G	C	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr2	119435028	119435029	chr2:119435029:T:C	chr2:119435029:T:C	T	C	T	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr2	119435290	119435291	chr2:119435291:G:A	rs17015838	G	A	G	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr2	119486142	119486143	chr2:119486143:G:A	rs56126845	G	A	G	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr2	119914678	119914679	chr2:119914679:T:A	rs6732703	T	A	T	Hoxd9.mouse_homeodomain_1	8	1	-	7.889898683853121	4.9573855590870535	ACCATAAAA
chr2	120313234	120313235	chr2:120313235:C:T	rs11673874	C	T	T	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr2	120445934	120445935	chr2:120445935:C:T	rs10186456	C	T	T	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr2	120533089	120533090	chr2:120533090:T:C	rs11903416	T	C	t	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr2	120656624	120656625	chr2:120656625:G:T	rs531574360	G	T	G	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr2	120692654	120692655	chr2:120692655:C:A	rs1869028	C	A	C	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr2	120809503	120809504	chr2:120809504:C:A	rs55922034	C	A	A	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr2	120813982	120813983	chr2:120813983:C:T	rs56236424	C	T	C	Hoxd9.mouse_homeodomain_1	2	1	+	7.522691831404475	1.0352513737808375	CCCATAAAG
chr2	120813983	120813984	chr2:120813984:A:G	rs12612284	A	G	G	Hoxd9.mouse_homeodomain_1	3	1	+	7.522691831404475	6.188613231541982	CCCATAAAG
chr2	120873808	120873809	chr2:120873809:T:C	rs277554	T	C	C	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr2	120934900	120934901	chr2:120934901:A:G	rs2166565	A	G	A	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr2	121260913	121260914	chr2:121260914:T:A	rs74902675	T	A	T	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr2	121596536	121596537	chr2:121596537:C:T	rs76561851	C	T	C	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr2	121838963	121838964	chr2:121838964:A:C	rs72830873	A	C	C	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr2	121904635	121904636	chr2:121904636:T:C	rs4241112	T	C	C	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr2	122905692	122905693	chr2:122905693:C:A	rs138855237	C	A	N	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr2	122905713	122905714	chr2:122905714:T:C	rs1850585	T	C	t	Hoxd9.mouse_homeodomain_1	3	1	-	8.678783717710262	7.34470511784777	GCCATAAAA
chr2	122923601	122923602	chr2:122923602:A:G	rs77628642	A	G	a	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr2	123061396	123061397	chr2:123061397:A:G	rs1395931	A	G	A	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr2	123144739	123144740	chr2:123144740:A:G	rs17009450	A	G	A	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr2	123356170	123356171	chr2:123356171:G:T	rs62167128	G	T	G	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr2	123651169	123651170	chr2:123651170:G:T	rs2419997	G	T	G	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr2	124159425	124159426	chr2:124159426:T:A	rs115501170	T	A	T	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr2	124534247	124534248	chr2:124534248:G:A	rs142332089	G	A	G	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr2	124534259	124534260	chr2:124534260:C:T	rs13021885	C	T	C	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr2	124605259	124605260	chr2:124605260:C:T	rs11123053	C	T	T	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr2	124712046	124712047	chr2:124712047:T:C	rs34634327	T	C	T	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr2	124812379	124812380	chr2:124812380:G:A	rs1384528	G	A	G	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr2	125415746	125415747	chr2:125415747:T:C	rs1436301	T	C	C	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr2	125525185	125525186	chr2:125525186:A:T	rs62159758	A	T	A	Hoxd9.mouse_homeodomain_1	8	1	+	8.027213970992095	5.094700846226028	CACATAAAA
chr2	126041326	126041327	chr2:126041327:G:A	rs115162577	G	A	G	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr2	126407450	126407451	chr2:126407451:C:T	rs67070425	C	T	T	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr2	126519111	126519112	chr2:126519112:T:C	rs7578810	T	C	T	Hoxd9.mouse_homeodomain_1	2	1	-	8.287463081002919	5.5210272824374	CCAATAAAA
chr2	126706496	126706497	chr2:126706497:C:G	rs10196527	C	G	C	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr2	126706505	126706506	chr2:126706506:A:G	rs10201058	A	G	G	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr2	126745880	126745881	chr2:126745881:A:G	rs11674717	A	G	A	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr2	126849314	126849315	chr2:126849315:C:G	rs138766762	C	G	C	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr2	126876248	126876249	chr2:126876249:T:A	rs76282291	T	A	T	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr2	126899280	126899281	chr2:126899281:G:A	rs61730218	G	A	g	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr2	126899284	126899285	chr2:126899285:C:T	rs61730220	C	T	C	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr2	127001079	127001080	chr2:127001080:A:G	rs10180840	A	G	G	Hoxd9.mouse_homeodomain_1	7	1	+	7.241935125048919	0.5381091784571871	CCCATACAA
chr2	127003141	127003142	chr2:127003142:G:A	rs6715733	G	A	G	Hoxd9.mouse_homeodomain_1	0	1	+	7.1462160923678635	6.357331058510722	GCCATAAAC
chr2	127155591	127155592	chr2:127155592:T:C	rs11890913	T	C	T	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr2	127194150	127194151	chr2:127194151:C:T	rs1002003957	C	T	C	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr2	127671246	127671247	chr2:127671247:C:T	rs34956512	C	T	c	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr2	127745683	127745684	chr2:127745684:T:C	rs17418090	T	C	T	Hoxd9.mouse_homeodomain_1	6	1	-	7.522691831404475	0.8188658848127437	CCCATAAAG
chr2	127857157	127857158	chr2:127857158:T:A	rs183137448	T	A	T	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr2	127857815	127857816	chr2:127857816:G:T	rs13031513	G	T	G	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr2	128319516	128319517	chr2:128319517:A:G	rs705051	A	G	G	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr2	128426591	128426592	chr2:128426592:G:A	rs2124432	G	A	A	Hoxd9.mouse_homeodomain_1	1	1	-	8.287463081002919	6.972661166669912	CCAATAAAA
chr2	128447682	128447683	chr2:128447683:T:G	rs78899569	T	G	G	Hoxd9.mouse_homeodomain_1	7	1	-	7.212456609225008	4.323040839194422	GCCATAAAG
chr2	128686448	128686449	chr2:128686449:C:A	rs10928826	C	A	A	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr2	129093432	129093433	chr2:129093433:C:T	rs6431055	C	T	T	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr2	129336368	129336369	chr2:129336369:C:T	rs2165438	C	T	T	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr2	129336409	129336410	chr2:129336410:A:C	rs11676103	A	C	A	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr2	129576969	129576970	chr2:129576970:T:C	rs2521951	T	C	T	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr2	129644775	129644776	chr2:129644776:C:T	rs1541355	C	T	C	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr2	129748315	129748316	chr2:129748316:A:G	rs13035304	A	G	A	Hoxd9.mouse_homeodomain_1	5	1	+	7.241935125048919	0.867745406802363	CCCATACAA
chr2	129748327	129748328	chr2:129748328:G:A	chr2:129748328:G:A	G	A	G	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr2	129749790	129749791	chr2:129749791:T:G	rs7589671	T	G	G	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr2	129749822	129749823	chr2:129749823:A:G	rs7586873	A	G	a	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr2	129864824	129864825	chr2:129864825:A:G	rs13426022	A	G	A	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr2	130727061	130727062	chr2:130727062:G:T	rs7561344	G	T	.	Hoxd9.mouse_homeodomain_1	6	1	-	7.241935125048919	8.98901893988973	CCCATACAA
chr2	130751778	130751779	chr2:130751779:A:G	rs79118410	A	G	G	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr2	130825810	130825811	chr2:130825811:G:A	rs35031046	G	A	G	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr2	130896882	130896883	chr2:130896883:G:A	rs6759753	G	A	G	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr2	131033225	131033226	chr2:131033226:G:A	rs12998401	G	A	G	Hoxd9.mouse_homeodomain_1	0	1	+	7.1462160923678635	6.357331058510722	GCCATAAAC
chr2	131424564	131424565	chr2:131424565:G:T	rs3730150	G	T	.	Hoxd9.mouse_homeodomain_1	6	1	-	7.241935125048919	8.98901893988973	CCCATACAA
chr2	131516047	131516048	chr2:131516048:G:A	rs1815205	G	A	.	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr2	131557850	131557851	chr2:131557851:T:C	rs72864777	T	C	.	Hoxd9.mouse_homeodomain_1	3	1	-	8.027213970992095	6.693135371129603	CACATAAAA
chr2	131683518	131683519	chr2:131683519:G:C	rs34909577	G	C	.	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr2	131924582	131924583	chr2:131924583:A:G	rs7561718	A	G	a	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr2	132324080	132324081	chr2:132324081:T:C	rs6704580	T	C	.	Hoxd9.mouse_homeodomain_1	7	1	-	7.1462160923678635	0.44239014577613167	GCCATAAAC
chr2	132438633	132438634	chr2:132438634:G:A	rs3748860	G	A	G	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr2	132448721	132448722	chr2:132448722:T:A	rs61138859	T	A	T	Hoxd9.mouse_homeodomain_1	8	1	-	8.287463081002919	5.354949956236852	CCAATAAAA
chr2	132645033	132645034	chr2:132645034:C:T	rs1131671	C	T	T	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr2	132668338	132668339	chr2:132668339:C:T	rs2709533	C	T	C	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr2	132697849	132697850	chr2:132697850:G:A	rs72844753	G	A	G	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr2	132754187	132754188	chr2:132754188:C:T	rs7595365	C	T	T	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr2	132975464	132975465	chr2:132975465:T:A	rs79850677	T	A	T	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr2	133139720	133139721	chr2:133139721:C:T	rs1434227	C	T	T	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr2	133416460	133416461	chr2:133416461:A:G	rs10180047	A	G	G	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr2	133463014	133463015	chr2:133463015:G:A	rs144806771	G	A	G	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr2	133525083	133525084	chr2:133525084:T:G	rs6720995	T	G	T	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr2	133690943	133690944	chr2:133690944:A:G	rs2167529	A	G	a	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr2	133759901	133759902	chr2:133759902:C:A	rs1446752	C	A	C	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr2	133774745	133774746	chr2:133774746:C:T	rs1446743	C	T	T	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr2	134235756	134235757	chr2:134235757:G:A	rs6752163	G	A	A	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr2	134303676	134303677	chr2:134303677:T:C	rs6430505	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.287463081002919	6.953384481140425	CCAATAAAA
chr2	134314921	134314922	chr2:134314922:G:A	rs74407524	G	A	G	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr2	134399164	134399165	chr2:134399165:C:A	rs35243281	C	A	A	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr2	134399181	134399182	chr2:134399182:A:G	rs7598763	A	G	A	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr2	134470078	134470079	chr2:134470079:T:C	rs478675	T	C	C	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr2	134603464	134603465	chr2:134603465:G:A	rs7570717	G	A	G	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr2	135210142	135210143	chr2:135210143:T:C	rs189668138	T	C	T	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr2	135579935	135579936	chr2:135579936:C:G	rs11892807	C	G	C	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr2	135742767	135742768	chr2:135742768:T:A	rs9630921	T	A	A	Hoxd9.mouse_homeodomain_1	5	1	-	7.212456609225008	6.632925487091506	GCCATAAAG
chr2	135745586	135745587	chr2:135745587:A:G	rs1438304	A	G	A	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr2	135882530	135882531	chr2:135882531:T:C	rs78364332	T	C	t	Hoxd9.mouse_homeodomain_1	3	1	-	7.716978748812629	6.382900148950135	GACATAAAA
chr2	136247359	136247360	chr2:136247360:G:A	rs73960154	G	A	G	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr2	136257040	136257041	chr2:136257041:C:T	rs13024450	C	T	C	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr2	136385044	136385045	chr2:136385045:C:T	rs189667140	C	T	C	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr2	136424090	136424091	chr2:136424091:C:T	rs12624019	C	T	C	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr2	137014692	137014693	chr2:137014693:G:A	rs891812	G	A	g	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr2	138016502	138016503	chr2:138016503:C:T	rs4954945	C	T	C	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr2	138016546	138016547	chr2:138016547:A:T	rs12474724	A	T	T	Hoxd9.mouse_homeodomain_1	0	1	+	7.889898683853121	7.094471634580788	ACCATAAAA
chr2	138102075	138102076	chr2:138102076:C:T	rs12999055	C	T	C	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr2	138601194	138601195	chr2:138601195:C:G	rs111702236	C	G	C	Hoxd9.mouse_homeodomain_1	6	1	+	7.241935125048919	2.285192993297999	CCCATACAA
chr2	138761088	138761089	chr2:138761089:G:A	rs4954721	G	A	C	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr2	138830828	138830829	chr2:138830829:C:T	rs60249921	C	T	C	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr2	139623059	139623060	chr2:139623060:G:C	rs13035482	G	C	G	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr2	140198159	140198160	chr2:140198160:C:T	rs17469669	C	T	G	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr2	140440413	140440414	chr2:140440414:T:C	rs1518443	T	C	C	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr2	140654997	140654998	chr2:140654998:G:A	rs116547076	G	A	A	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr2	140655008	140655009	chr2:140655009:G:T	rs184312031	G	T	G	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr2	140663817	140663818	chr2:140663818:G:A	rs75701033	G	A	A	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr2	140717731	140717732	chr2:140717732:T:C	rs17513500	T	C	T	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr2	141201415	141201416	chr2:141201416:C:G	rs6731032	C	G	G	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr2	141207124	141207125	chr2:141207125:C:T	rs111303790	C	T	C	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr2	141641609	141641610	chr2:141641610:G:A	rs12464970	G	A	A	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr2	141707797	141707798	chr2:141707798:C:T	rs79322422	C	T	C	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr2	141851213	141851214	chr2:141851214:C:A	rs10496903	C	A	C	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr2	142218160	142218161	chr2:142218161:T:C	rs7579265	T	C	T	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr2	142581418	142581419	chr2:142581419:T:C	rs192855706	T	C	T	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr2	142761668	142761669	chr2:142761669:C:A	rs4662565	C	A	C	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr2	142827364	142827365	chr2:142827365:T:C	rs137984096	T	C	T	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr2	142877276	142877277	chr2:142877277:A:T	rs2016775	A	T	A	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr2	142895456	142895457	chr2:142895457:A:T	rs6711280	A	T	A	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr2	142905046	142905047	chr2:142905047:T:C	rs6429993	T	C	T	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr2	143428975	143428976	chr2:143428976:T:G	rs13011344	T	G	T	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr2	143440318	143440319	chr2:143440319:T:C	rs4395207	T	C	T	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr2	143520636	143520637	chr2:143520637:A:G	rs11679529	A	G	A	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr2	143526660	143526661	chr2:143526661:G:T	rs4560052	G	T	G	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr2	143573730	143573731	chr2:143573731:T:C	rs138624319	T	C	T	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr2	143607306	143607307	chr2:143607307:C:T	rs13389286	C	T	C	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr2	143692611	143692612	chr2:143692612:T:G	rs1996447	T	G	T	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr2	143830173	143830174	chr2:143830174:A:G	rs10209234	A	G	G	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr2	144157405	144157406	chr2:144157406:T:C	rs186679197	T	C	T	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr2	144339474	144339475	chr2:144339475:C:G	rs564830066	C	G	C	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr2	144464889	144464890	chr2:144464890:A:T	chr2:144464890:A:T	A	T	A	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr2	144495161	144495162	chr2:144495162:T:G	rs6761789	T	G	T	Hoxd9.mouse_homeodomain_1	2	1	-	7.9772278588234515	8.678783717710262	GCAATAAAA
chr2	144524913	144524914	chr2:144524914:C:G	rs576643185	C	G	C	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr2	144539448	144539449	chr2:144539449:A:T	rs4662376	A	T	A	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr2	144660320	144660321	chr2:144660321:C:G	rs148987921	C	G	C	Hoxd9.mouse_homeodomain_1	1	1	+	7.889898683853121	1.480365455070757	ACCATAAAA
chr2	144686664	144686665	chr2:144686665:A:G	rs931280917	A	G	A	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr2	144806477	144806478	chr2:144806478:A:G	rs1483491	A	G	A	Hoxd9.mouse_homeodomain_1	8	1	+	8.678783717710262	7.212456609225008	GCCATAAAA
chr2	144984281	144984282	chr2:144984282:T:C	rs34382743	T	C	C	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr2	145330084	145330085	chr2:145330085:T:C	rs7590923	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.98901893988973	7.654940340027237	CCCATAAAA
chr2	145361449	145361450	chr2:145361450:G:A	rs1533426	G	A	G	Hoxd9.mouse_homeodomain_1	1	1	-	7.9772278588234515	6.662425944490444	GCAATAAAA
chr2	145693428	145693429	chr2:145693429:C:T	rs138000384	C	T	C	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr2	145769300	145769301	chr2:145769301:T:C	rs13390611	T	C	T	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr2	145800192	145800193	chr2:145800193:C:T	rs556060461	C	T	C	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr2	145960452	145960453	chr2:145960453:C:T	rs114541625	C	T	T	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr2	146075271	146075272	chr2:146075272:A:G	rs56125511	A	G	A	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr2	146119793	146119794	chr2:146119794:C:A	rs74571772	C	A	C	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr2	146125360	146125361	chr2:146125361:T:C	chr2:146125361:T:C	T	C	T	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr2	147045378	147045379	chr2:147045379:G:T	rs755404239	G	T	G	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr2	147198724	147198725	chr2:147198725:G:T	rs72859280	G	T	G	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr2	147374100	147374101	chr2:147374101:T:C	rs79929889	T	C	T	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr2	147456865	147456866	chr2:147456866:A:G	rs12988011	A	G	A	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr2	147488411	147488412	chr2:147488412:A:G	rs7603391	A	G	A	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr2	147511752	147511753	chr2:147511753:A:G	rs1438860	A	G	A	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr2	147567493	147567494	chr2:147567494:G:A	rs1371037	G	A	G	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr2	147782282	147782283	chr2:147782283:A:G	rs998884	A	G	A	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr2	148258427	148258428	chr2:148258428:G:A	rs2167882	G	A	A	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr2	148552562	148552563	chr2:148552563:A:G	rs4609986	A	G	A	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr2	149218569	149218570	chr2:149218570:T:G	rs7577889	T	G	T	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr2	149463682	149463683	chr2:149463683:C:T	rs1196655	C	T	C	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr2	149658764	149658765	chr2:149658765:T:C	rs1526282	T	C	C	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr2	149679569	149679570	chr2:149679570:A:C	rs74483574	A	C	A	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr2	149692968	149692969	chr2:149692969:C:T	chr2:149692969:C:T	C	T	C	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr2	149872353	149872354	chr2:149872354:G:T	rs4667392	G	T	T	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr2	149878330	149878331	chr2:149878331:T:A	rs7608072	T	A	T	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr2	149994599	149994600	chr2:149994600:G:A	rs577208417	G	A	G	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr2	150104231	150104232	chr2:150104232:G:A	rs142187142	G	A	G	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr2	150272335	150272336	chr2:150272336:C:G	rs140220217	C	G	C	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr2	150432878	150432879	chr2:150432879:C:T	rs62167425	C	T	C	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr2	150529446	150529447	chr2:150529447:T:A	rs115791672	T	A	T	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr2	150548686	150548687	chr2:150548687:A:G	rs112258276	A	G	A	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr2	150610079	150610080	chr2:150610080:A:C	rs16828378	A	C	A	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr2	150640172	150640173	chr2:150640173:C:T	rs55728462	C	T	C	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr2	150917130	150917131	chr2:150917131:T:C	rs114329316	T	C	T	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr2	151337718	151337719	chr2:151337719:C:T	rs11682727	C	T	C	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr2	151353520	151353521	chr2:151353521:C:A	rs73967537	C	A	C	Hoxd9.mouse_homeodomain_1	1	1	+	7.45645131454733	6.494646345649697	CCCATAAAC
chr2	151354198	151354199	chr2:151354199:T:C	rs2342909	T	C	T	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr2	151358123	151358124	chr2:151358124:G:A	rs3771889	G	A	G	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr2	151375238	151375239	chr2:151375239:C:A	rs181847330	C	A	C	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr2	151849803	151849804	chr2:151849804:T:G	rs6433680	T	G	T	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr2	151923652	151923653	chr2:151923653:C:T	rs6729612	C	T	C	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr2	152038683	152038684	chr2:152038684:G:A	rs16830650	G	A	G	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr2	152356557	152356558	chr2:152356558:G:A	rs10432492	G	A	G	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr2	152356566	152356567	chr2:152356567:G:A	chr2:152356567:G:A	G	A	G	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr2	152457689	152457690	chr2:152457690:T:C	rs10193625	T	C	T	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr2	152532433	152532434	chr2:152532434:G:T	rs2346182	G	T	T	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr2	152558219	152558220	chr2:152558220:C:T	rs116416458	C	T	C	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr2	152558861	152558862	chr2:152558862:T:G	rs6434098	T	G	T	Hoxd9.mouse_homeodomain_1	1	1	-	8.027213970992095	8.98901893988973	CACATAAAA
chr2	152757844	152757845	chr2:152757845:G:C	rs13419134	G	C	G	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr2	153090658	153090659	chr2:153090659:T:G	rs62179566	T	G	T	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr2	153384466	153384467	chr2:153384467:A:T	rs1370673	A	T	A	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr2	153930454	153930455	chr2:153930455:G:A	rs1960811	G	A	A	Hoxd9.mouse_homeodomain_1	2	1	-	7.889898683853121	1.4024582262294842	ACCATAAAA
chr2	154684391	154684392	chr2:154684392:G:C	rs3106672	G	C	C	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr2	154978502	154978503	chr2:154978503:T:C	rs112380813	T	C	C	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr2	155144282	155144283	chr2:155144283:T:G	rs58321391	T	G	T	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr2	155210444	155210445	chr2:155210445:T:C	rs1547524	T	C	C	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr2	156046913	156046914	chr2:156046914:C:A	rs4572544	C	A	C	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr2	156254512	156254513	chr2:156254513:C:G	rs1226413	C	G	G	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr2	156396259	156396260	chr2:156396260:A:G	rs298315	A	G	G	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr2	156536111	156536112	chr2:156536112:C:G	rs3820857	C	G	C	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr2	157224363	157224364	chr2:157224364:G:A	rs263305	G	A	G	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr2	157435778	157435779	chr2:157435779:G:T	rs192916337	G	T	G	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr2	157488689	157488690	chr2:157488690:T:C	rs2061039	T	C	C	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr2	157777776	157777777	chr2:157777777:G:A	rs1146037	G	A	A	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr2	157866670	157866671	chr2:157866671:A:T	rs6437117	A	T	T	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr2	157989791	157989792	chr2:157989792:C:T	rs73968514	C	T	T	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr2	158011454	158011455	chr2:158011455:G:A	rs114512380	G	A	G	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr2	158011482	158011483	chr2:158011483:A:G	rs186857658	A	G	A	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr2	158103673	158103674	chr2:158103674:T:G	rs4637056	T	G	G	Hoxd9.mouse_homeodomain_1	5	1	-	7.1462160923678635	5.248908539807868	GCCATAAAC
chr2	158197769	158197770	chr2:158197770:C:T	rs78719464	C	T	C	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr2	158200483	158200484	chr2:158200484:A:C	rs1176233992	A	C	A	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr2	158651224	158651225	chr2:158651225:A:G	rs111829602	A	G	A	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr2	158716604	158716605	chr2:158716605:G:T	rs114582476	G	T	G	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr2	158762633	158762634	chr2:158762634:T:C	rs56894726	T	C	T	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr2	158927061	158927062	chr2:158927062:G:A	rs111981650	G	A	G	Hoxd9.mouse_homeodomain_1	0	1	-	8.287463081002919	6.392915775693977	CCAATAAAA
chr2	158973609	158973610	chr2:158973610:C:T	rs73969405	C	T	C	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr2	159029194	159029195	chr2:159029195:G:A	rs72936445	G	A	G	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr2	159114850	159114851	chr2:159114851:A:G	rs264581	A	G	A	Hoxd9.mouse_homeodomain_1	4	1	-	7.241935125048919	4.5868884801863405	CCCATACAA
chr2	159125067	159125068	chr2:159125068:G:A	rs10185064	G	A	A	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr2	159125075	159125076	chr2:159125076:T:C	rs60672869	T	C	T	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr2	159125077	159125078	chr2:159125078:C:A	rs115836737	C	A	C	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr2	159312235	159312236	chr2:159312236:T:C	rs73967808	T	C	A	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr2	159322263	159322264	chr2:159322264:C:T	rs174226	C	T	T	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr2	159572075	159572076	chr2:159572076:C:T	rs11693108	C	T	T	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr2	159714598	159714599	chr2:159714599:G:A	rs13031998	G	A	G	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr2	159968669	159968670	chr2:159968670:G:A	rs2667021	G	A	G	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr2	160050376	160050377	chr2:160050377:C:A	rs12470443	C	A	C	Hoxd9.mouse_homeodomain_1	8	1	+	7.45645131454733	8.98901893988973	CCCATAAAC
chr2	160091469	160091470	chr2:160091470:A:C	rs77096478	A	C	A	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr2	160108971	160108972	chr2:160108972:A:T	rs6758074	A	T	A	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr2	160175773	160175774	chr2:160175774:A:G	rs1870104	A	G	A	Hoxd9.mouse_homeodomain_1	1	1	+	8.027213970992095	2.5794857111073646	CACATAAAA
chr2	160472981	160472982	chr2:160472982:A:T	rs113309132	A	T	A	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr2	160636339	160636340	chr2:160636340:T:C	rs62193918	T	C	T	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr2	160666537	160666538	chr2:160666538:A:G	rs4374388	A	G	A	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr2	160869350	160869351	chr2:160869351:C:G	rs2218908	C	G	C	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr2	160906049	160906050	chr2:160906050:G:A	rs75786548	G	A	G	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr2	160932984	160932985	chr2:160932985:T:C	rs16845328	T	C	T	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr2	161125460	161125461	chr2:161125461:C:T	rs10164593	C	T	C	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr2	161203457	161203458	chr2:161203458:A:T	rs11884495	A	T	A	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr2	161308879	161308880	chr2:161308880:A:G	rs111409374	A	G	A	Hoxd9.mouse_homeodomain_1	4	1	-	7.1462160923678635	4.491169447505284	GCCATAAAC
chr2	161426957	161426958	chr2:161426958:G:A	rs56152608	G	A	G	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr2	162056986	162056987	chr2:162056987:C:T	rs117900086	C	T	C	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr2	162056987	162056988	chr2:162056988:G:C	rs6733162	G	C	C	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr2	162125539	162125540	chr2:162125540:T:C	rs114617592	T	C	T	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr2	162129729	162129730	chr2:162129730:C:T	rs6743387	C	T	C	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr2	162295382	162295383	chr2:162295383:T:C	rs191998670	T	C	T	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr2	162688352	162688353	chr2:162688353:C:T	rs9807929	C	T	T	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr2	162840540	162840541	chr2:162840541:C:A	rs12470503	C	A	C	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr2	163172234	163172235	chr2:163172235:T:C	rs1489635	T	C	T	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr2	163397674	163397675	chr2:163397675:G:A	rs553565872	G	A	G	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr2	163553719	163553720	chr2:163553720:G:T	rs566218033	G	T	g	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr2	164065259	164065260	chr2:164065260:A:G	rs35303331	A	G	A	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr2	164191394	164191395	chr2:164191395:G:C	rs13021222	G	C	C	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr2	164456501	164456502	chr2:164456502:T:C	rs16849493	T	C	T	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr2	164773949	164773950	chr2:164773950:T:C	rs355865	T	C	C	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr2	164835537	164835538	chr2:164835538:T:C	rs11902000	T	C	T	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr2	164933890	164933891	chr2:164933891:C:T	rs1454414	C	T	C	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr2	164967192	164967193	chr2:164967193:T:C	rs11683903	T	C	T	Hoxd9.mouse_homeodomain_1	6	1	-	8.409487817756228	1.7056618711644962	CCCATTAAA
chr2	164992200	164992201	chr2:164992201:T:C	rs1386067737	T	C	T	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr2	165036255	165036256	chr2:165036256:C:G	rs34207137	C	G	C	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr2	165074991	165074992	chr2:165074992:A:G	rs11691736	A	G	A	Hoxd9.mouse_homeodomain_1	6	1	+	8.98901893988973	2.285192993297999	CCCATAAAA
chr2	165435266	165435267	chr2:165435267:T:G	rs73969209	T	G	T	Hoxd9.mouse_homeodomain_1	1	1	-	7.716978748812629	8.678783717710262	GACATAAAA
chr2	165505897	165505898	chr2:165505898:C:T	rs4667488	C	T	T	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr2	165535626	165535627	chr2:165535627:C:T	rs11903328	C	T	C	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr2	165621528	165621529	chr2:165621529:A:G	rs918231749	A	G	A	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr2	165655569	165655570	chr2:165655570:T:C	rs79556258	T	C	T	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr2	165655573	165655574	chr2:165655574:A:G	rs6432840	A	G	A	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr2	165951268	165951269	chr2:165951269:G:A	rs2045693	G	A	A	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr2	165953298	165953299	chr2:165953299:C:G	rs6716682	C	G	G	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr2	166074061	166074062	chr2:166074062:T:C	rs570504	T	C	T	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr2	166084502	166084503	chr2:166084503:C:T	rs78001108	C	T	C	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr2	166314290	166314291	chr2:166314291:T:C	rs11885693	T	C	C	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr2	166314603	166314604	chr2:166314604:A:C	rs6731773	A	C	C	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr2	166314977	166314978	chr2:166314978:T:C	rs6718922	T	C	C	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr2	166653505	166653506	chr2:166653506:A:C	rs186245327	A	C	A	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr2	166700296	166700297	chr2:166700297:T:C	rs2055799	T	C	T	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr2	166740673	166740674	chr2:166740674:G:C	rs13407687	G	C	G	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr2	166962041	166962042	chr2:166962042:C:T	rs1473041	C	T	T	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr2	167254646	167254647	chr2:167254647:A:G	rs73972224	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.287463081002919	6.953384481140425	CCAATAAAA
chr2	167287393	167287394	chr2:167287394:G:A	rs60988732	G	A	G	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr2	167899038	167899039	chr2:167899039:G:A	rs142984017	G	A	G	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr2	168155747	168155748	chr2:168155748:A:C	rs10209630	A	C	A	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr2	168189961	168189962	chr2:168189962:G:C	rs141768431	G	C	G	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr2	168242018	168242019	chr2:168242019:A:G	rs59111477	A	G	A	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr2	168254848	168254849	chr2:168254849:A:G	chr2:168254849:A:G	A	G	A	Hoxd9.mouse_homeodomain_1	5	1	+	7.716978748812629	1.3427890305660735	GACATAAAA
chr2	168292788	168292789	chr2:168292789:A:G	rs142476840	A	G	A	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr2	168597182	168597183	chr2:168597183:G:T	rs6759728	G	T	G	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr2	168687542	168687543	chr2:168687543:C:T	rs1010853309	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	-	8.099252595576761	7.3103675617196195	GCCATTAAA
chr2	168687543	168687544	chr2:168687544:G:A	rs74353145	G	A	G	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr2	168706461	168706462	chr2:168706462:A:G	rs11686406	A	G	A	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr2	168728276	168728277	chr2:168728277:G:A	rs62174440	G	A	G	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr2	169010719	169010720	chr2:169010720:G:A	rs6751775	G	A	A	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr2	169073796	169073797	chr2:169073797:G:A	rs778694750	G	A	G	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr2	169142041	169142042	chr2:169142042:G:A	rs181885191	G	A	G	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr2	169204001	169204002	chr2:169204002:C:G	rs199749865	C	G	C	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr2	169393418	169393419	chr2:169393419:A:G	rs185634921	A	G	A	Hoxd9.mouse_homeodomain_1	8	1	+	8.027213970992095	6.560886862506841	CACATAAAA
chr2	169577552	169577553	chr2:169577553:G:C	rs2353193	G	C	G	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr2	169642238	169642239	chr2:169642239:A:C	rs16857107	A	C	A	Hoxd9.mouse_homeodomain_1	8	1	+	7.091711387329735	5.559143761987334	CCCATCAAA
chr2	169684339	169684340	chr2:169684340:G:A	rs2930	G	A	G	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr2	169712896	169712897	chr2:169712897:C:T	rs74490292	C	T	C	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr2	169715547	169715548	chr2:169715548:C:T	rs7590316	C	T	C	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr2	170212819	170212820	chr2:170212820:G:A	rs60728799	G	A	G	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr2	170278577	170278578	chr2:170278578:C:T	rs13419871	C	T	T	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr2	170431303	170431304	chr2:170431304:G:A	rs13412287	G	A	G	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr2	170568756	170568757	chr2:170568757:G:A	rs10180861	G	A	A	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr2	170681090	170681091	chr2:170681091:A:G	rs73976215	A	G	A	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr2	170712139	170712140	chr2:170712140:C:T	rs79092052	C	T	C	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr2	170770051	170770052	chr2:170770052:T:C	rs78005254	T	C	T	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr2	170815931	170815932	chr2:170815932:C:T	rs190849740	C	T	C	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr2	171191213	171191214	chr2:171191214:T:C	rs75768643	T	C	T	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr2	171598554	171598555	chr2:171598555:T:A	rs7608866	T	A	T	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr2	171811409	171811410	chr2:171811410:A:T	rs1382379723	A	T	a	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr2	171894168	171894169	chr2:171894169:T:C	rs368919933	T	C	T	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr2	172047361	172047362	chr2:172047362:A:G	rs1008152	A	G	A	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr2	172047369	172047370	chr2:172047370:G:A	rs1008151	G	A	A	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr2	172121149	172121150	chr2:172121150:G:T	rs59012643	G	T	G	Hoxd9.mouse_homeodomain_1	1	1	-	8.287463081002919	7.325658112105286	CCAATAAAA
chr2	172169166	172169167	chr2:172169167:T:C	rs10186626	T	C	T	Hoxd9.mouse_homeodomain_1	7	1	-	7.212456609225008	0.5086306626332764	GCCATAAAG
chr2	172182025	172182026	chr2:172182026:A:G	rs1386352	A	G	G	Hoxd9.mouse_homeodomain_1	0	1	+	7.889898683853121	8.678783717710262	ACCATAAAA
chr2	172210816	172210817	chr2:172210817:G:C	rs6747365	G	C	C	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr2	172308430	172308431	chr2:172308431:A:G	rs7560146	A	G	G	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr2	172431064	172431065	chr2:172431065:A:T	rs3108780	A	T	A	Hoxd9.mouse_homeodomain_1	4	1	-	7.522691831404475	0.6808733840738688	CCCATAAAG
chr2	172627449	172627450	chr2:172627450:C:T	rs140781347	C	T	C	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr2	172743046	172743047	chr2:172743047:G:A	rs10181126	G	A	G	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr2	172783278	172783279	chr2:172783279:T:G	rs76599085	T	G	T	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr2	172783293	172783294	chr2:172783294:T:C	rs141571931	T	C	T	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr2	172823466	172823467	chr2:172823467:G:C	rs2258081	G	C	G	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr2	173016748	173016749	chr2:173016749:C:T	rs72909440	C	T	C	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr2	173022135	173022136	chr2:173022136:T:C	rs142927320	T	C	T	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr2	173042175	173042176	chr2:173042176:C:T	rs75925485	C	T	C	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr2	173048166	173048167	chr2:173048167:C:T	rs6717529	C	T	T	Hoxd9.mouse_homeodomain_1	0	1	+	8.287463081002919	6.392915775693977	CCAATAAAA
chr2	173050046	173050047	chr2:173050047:T:C	rs3769210	T	C	C	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr2	173090058	173090059	chr2:173090059:A:G	rs9636294	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.027213970992095	6.693135371129603	CACATAAAA
chr2	173177253	173177254	chr2:173177254:G:A	rs34658268	G	A	a	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr2	173205335	173205336	chr2:173205336:C:T	rs77426349	C	T	C	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr2	173205382	173205383	chr2:173205383:C:A	rs3769159	C	A	C	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr2	173221012	173221013	chr2:173221013:A:G	rs11690597	A	G	A	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr2	173221018	173221019	chr2:173221019:C:T	rs1371573	C	T	C	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr2	173296710	173296711	chr2:173296711:G:A	rs11678990	G	A	G	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr2	173573430	173573431	chr2:173573431:G:C	rs10930603	G	C	G	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr2	173607334	173607335	chr2:173607335:T:A	rs112334221	T	A	T	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr2	173749557	173749558	chr2:173749558:G:A	chr2:173749558:G:A	G	A	G	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr2	173873260	173873261	chr2:173873261:C:T	rs10084350	C	T	C	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr2	174048311	174048312	chr2:174048312:T:C	rs912873154	T	C	T	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr2	174704307	174704308	chr2:174704308:G:A	rs1376874	G	A	G	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr2	174730574	174730575	chr2:174730575:G:A	rs12468700	G	A	G	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr2	174830970	174830971	chr2:174830971:G:T	rs76661670	G	T	G	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr2	175234263	175234264	chr2:175234264:G:A	rs60593477	G	A	G	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr2	175256524	175256525	chr2:175256525:T:G	rs268184	T	G	T	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr2	175275521	175275522	chr2:175275522:G:T	rs75655262	G	T	g	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr2	175575713	175575714	chr2:175575714:C:T	rs6750151	C	T	C	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr2	175577773	175577774	chr2:175577774:T:A	rs151314378	T	A	T	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr2	176076377	176076378	chr2:176076378:C:A	rs61206863	C	A	C	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr2	176077311	176077312	chr2:176077312:G:T	rs78797704	G	T	G	Hoxd9.mouse_homeodomain_1	0	1	+	8.678783717710262	7.094471634580788	GCCATAAAA
chr2	176164357	176164358	chr2:176164358:C:T	rs2857541	C	T	C	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr2	176455340	176455341	chr2:176455341:G:T	rs970859	G	T	G	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr2	176515462	176515463	chr2:176515463:G:A	rs7559379	G	A	G	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr2	176552734	176552735	chr2:176552735:T:C	chr2:176552735:T:C	T	C	t	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr2	176552742	176552743	chr2:176552743:A:G	rs1992909	A	G	A	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr2	176642150	176642151	chr2:176642151:A:C	rs59482405	A	C	A	Hoxd9.mouse_homeodomain_1	4	1	-	7.212456609225008	0.3706381618944015	GCCATAAAG
chr2	176747579	176747580	chr2:176747580:A:G	rs2137733	A	G	A	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr2	176748034	176748035	chr2:176748035:G:T	rs16864384	G	T	G	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr2	177161829	177161830	chr2:177161830:C:T	rs2706126	C	T	T	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr2	177213486	177213487	chr2:177213487:G:A	rs4383369	G	A	G	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr2	177662952	177662953	chr2:177662953:C:T	rs4893977	C	T	T	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr2	177681169	177681170	chr2:177681170:C:T	rs9679360	C	T	C	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr2	177754391	177754392	chr2:177754392:A:G	rs75068407	A	G	A	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr2	178264291	178264292	chr2:178264292:A:G	rs334002	A	G	A	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr2	178379832	178379833	chr2:178379833:C:A	rs7565742	C	A	C	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr2	178431938	178431939	chr2:178431939:T:C	rs3997877	T	C	T	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr2	178807819	178807820	chr2:178807820:T:C	rs2046778	T	C	T	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr2	179048865	179048866	chr2:179048866:C:T	rs12467652	C	T	C	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr2	179051519	179051520	chr2:179051520:T:C	rs368088252	T	C	T	Hoxd9.mouse_homeodomain_1	6	1	-	8.678783717710262	1.9749577711185315	GCCATAAAA
chr2	179579712	179579713	chr2:179579713:T:C	rs876801	T	C	T	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr2	179580290	179580291	chr2:179580291:G:T	rs80300097	G	T	G	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr2	179636637	179636638	chr2:179636638:T:G	rs3112944	T	G	T	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr2	179652462	179652463	chr2:179652463:C:T	rs17820975	C	T	C	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr2	179893828	179893829	chr2:179893829:A:G	rs1327732391	A	G	A	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr2	180056406	180056407	chr2:180056407:G:A	rs2672664	G	A	G	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr2	180231976	180231977	chr2:180231977:G:A	rs113029650	G	A	G	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr2	180386293	180386294	chr2:180386294:A:T	rs4894176	A	T	T	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr2	180604188	180604189	chr2:180604189:C:T	rs7586433	C	T	T	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr2	180626473	180626474	chr2:180626474:G:C	rs11894893	G	C	G	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr2	180723368	180723369	chr2:180723369:C:A	chr2:180723369:C:A	C	A	C	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr2	180952623	180952624	chr2:180952624:A:G	rs4618005	A	G	A	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr2	180990565	180990566	chr2:180990566:A:G	rs4666997	A	G	A	Hoxd9.mouse_homeodomain_1	4	1	-	8.027213970992095	5.372167326129518	CACATAAAA
chr2	181035894	181035895	chr2:181035895:C:G	rs12614444	C	G	C	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr2	181152902	181152903	chr2:181152903:A:G	rs55954384	A	G	A	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr2	181174773	181174774	chr2:181174774:C:T	rs562882017	C	T	C	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr2	181174836	181174837	chr2:181174837:G:A	rs56096261	G	A	G	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr2	181569456	181569457	chr2:181569457:A:G	rs13020851	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	7.1462160923678635	5.81213749250537	GCCATAAAC
chr2	181602178	181602179	chr2:181602179:A:C	rs16867455	A	C	A	Hoxd9.mouse_homeodomain_1	4	1	-	8.678783717710262	1.8369652703796566	GCCATAAAA
chr2	181741934	181741935	chr2:181741935:C:T	rs146477771	C	T	C	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr2	181741965	181741966	chr2:181741966:T:G	rs1208112257	T	G	T	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr2	181741973	181741974	chr2:181741974:C:G	rs12617923	C	G	C	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr2	182013029	182013030	chr2:182013030:A:G	rs1196188	A	G	G	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr2	182081872	182081873	chr2:182081873:G:T	rs13395058	G	T	T	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr2	182242515	182242516	chr2:182242516:A:G	rs13024682	A	G	A	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr2	182527222	182527223	chr2:182527223:T:C	rs1418634085	T	C	T	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr2	182636956	182636957	chr2:182636957:G:A	rs4666859	G	A	G	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr2	182866859	182866860	chr2:182866860:A:G	rs80261417	A	G	A	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr2	182890411	182890412	chr2:182890412:C:T	rs10177372	C	T	C	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr2	183455307	183455308	chr2:183455308:G:A	rs12693342	G	A	G	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr2	183477373	183477374	chr2:183477374:G:T	rs7567338	G	T	T	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr2	183729676	183729677	chr2:183729677:C:T	rs12617731	C	T	C	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr2	184435465	184435466	chr2:184435466:T:C	rs10188196	T	C	T	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr2	184524573	184524574	chr2:184524574:G:A	rs62174888	G	A	G	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr2	184534185	184534186	chr2:184534186:A:G	rs77785660	A	G	A	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr2	184585929	184585930	chr2:184585930:T:A	rs76926829	T	A	T	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr2	184905186	184905187	chr2:184905187:T:C	rs151243306	T	C	T	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr2	185012741	185012742	chr2:185012742:C:A	chr2:185012742:C:A	C	A	C	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr2	185300958	185300959	chr2:185300959:G:A	rs4563187	G	A	A	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr2	185578533	185578534	chr2:185578534:G:A	rs72906158	G	A	G	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr2	185761561	185761562	chr2:185761562:T:A	rs11682752	T	A	T	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr2	185785684	185785685	chr2:185785685:T:C	rs10931198	T	C	T	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr2	186457191	186457192	chr2:186457192:T:C	rs4544390	T	C	C	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr2	186484335	186484336	chr2:186484336:T:C	rs12473076	T	C	T	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr2	186504239	186504240	chr2:186504240:A:G	rs115861404	A	G	A	Hoxd9.mouse_homeodomain_1	5	1	+	7.889898683853121	1.5157089656065659	ACCATAAAA
chr2	186504408	186504409	chr2:186504409:A:G	rs80187140	A	G	A	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr2	186981789	186981790	chr2:186981790:C:T	rs10460381	C	T	C	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr2	187297884	187297885	chr2:187297885:T:C	rs17705846	T	C	T	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr2	187303622	187303623	chr2:187303623:A:G	rs840576	A	G	G	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr2	187430085	187430086	chr2:187430086:T:C	rs115434606	T	C	T	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr2	187501236	187501237	chr2:187501237:C:T	rs8176425	C	T	C	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr2	187618632	187618633	chr2:187618633:A:G	rs7562407	A	G	G	Hoxd9.mouse_homeodomain_1	3	1	+	8.027213970992095	6.693135371129603	CACATAAAA
chr2	187618644	187618645	chr2:187618645:A:G	rs7562491	A	G	G	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr2	187642749	187642750	chr2:187642750:G:A	rs113539942	G	A	G	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr2	188319694	188319695	chr2:188319695:T:C	rs4640356	T	C	C	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr2	188322751	188322752	chr2:188322752:C:T	rs377269682	C	T	C	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr2	188526333	188526334	chr2:188526334:T:C	rs563613411	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.099252595576761	6.765173995714267	GCCATTAAA
chr2	188605086	188605087	chr2:188605087:A:G	rs1605462	A	G	A	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr2	188752014	188752015	chr2:188752015:G:C	rs17354592	G	C	G	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr2	188787115	188787116	chr2:188787116:A:T	rs7569460	A	T	A	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr2	188787116	188787117	chr2:188787117:A:G	rs7569461	A	G	A	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr2	188835029	188835030	chr2:188835030:G:A	rs10172458	G	A	A	Hoxd9.mouse_homeodomain_1	0	1	+	7.9772278588234515	7.188342824966311	GCAATAAAA
chr2	189150041	189150042	chr2:189150042:C:T	rs76248513	C	T	C	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr2	189223627	189223628	chr2:189223628:A:G	rs35772309	A	G	G	Hoxd9.mouse_homeodomain_1	5	1	+	7.9772278588234515	1.603038140576896	GCAATAAAA
chr2	189226094	189226095	chr2:189226095:T:G	rs7587147	T	G	G	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr2	189286675	189286676	chr2:189286676:A:G	rs16831325	A	G	A	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr2	189297633	189297634	chr2:189297634:G:A	rs7576536	G	A	G	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr2	189379414	189379415	chr2:189379415:T:A	rs916660165	T	A	T	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr2	189380134	189380135	chr2:189380135:T:A	rs10931416	T	A	T	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr2	189553963	189553964	chr2:189553964:C:T	rs12693541	C	T	C	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr2	189584799	189584800	chr2:189584800:A:T	rs10188680	A	T	T	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr2	190120953	190120954	chr2:190120954:G:A	rs13034723	G	A	G	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr2	190272434	190272435	chr2:190272435:C:T	rs2664242	C	T	C	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr2	190408940	190408941	chr2:190408941:C:T	rs989885710	C	T	c	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr2	190433046	190433047	chr2:190433047:C:T	rs4853705	C	T	C	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr2	190663435	190663436	chr2:190663436:T:C	rs958770	T	C	C	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr2	190810088	190810089	chr2:190810089:A:G	rs6736182	A	G	A	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr2	190947494	190947495	chr2:190947495:T:C	rs115927075	T	C	T	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr2	191059879	191059880	chr2:191059880:T:A	rs3024861	T	A	T	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr2	191165971	191165972	chr2:191165972:A:C	rs1011755479	A	C	A	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr2	191217775	191217776	chr2:191217776:G:T	rs576880397	G	T	G	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr2	191219577	191219578	chr2:191219578:A:T	rs111384558	A	T	A	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr2	191307147	191307148	chr2:191307148:T:C	rs13021013	T	C	T	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr2	191582785	191582786	chr2:191582786:G:A	rs62179731	G	A	G	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr2	191746905	191746906	chr2:191746906:C:T	rs4405693	C	T	C	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr2	191748755	191748756	chr2:191748756:T:C	rs7598944	T	C	c	Hoxd9.mouse_homeodomain_1	6	1	-	7.091711387329735	0.38788544073800313	CCCATCAAA
chr2	191932834	191932835	chr2:191932835:A:G	rs11896750	A	G	A	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr2	191975605	191975606	chr2:191975606:G:T	rs4371301	G	T	T	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr2	192107802	192107803	chr2:192107803:A:C	rs7557901	A	C	A	Hoxd9.mouse_homeodomain_1	7	1	+	8.287463081002919	5.398047310972334	CCAATAAAA
chr2	192146230	192146231	chr2:192146231:C:G	rs115004337	C	G	C	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr2	192586115	192586116	chr2:192586116:T:C	rs6434566	T	C	T	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr2	193948827	193948828	chr2:193948828:A:G	chr2:193948828:A:G	A	G	A	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr2	193954039	193954040	chr2:193954040:G:A	rs16835444	G	A	A	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr2	194560236	194560237	chr2:194560237:A:G	rs12476835	A	G	a	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr2	196032316	196032317	chr2:196032317:G:A	rs2220520	G	A	G	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr2	196106587	196106588	chr2:196106588:C:T	rs13400153	C	T	T	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr2	196195401	196195402	chr2:196195402:T:C	rs55889195	T	C	T	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr2	196245571	196245572	chr2:196245572:T:C	rs7575508	T	C	T	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr2	196276546	196276547	chr2:196276547:C:T	rs4145361	C	T	C	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr2	196323668	196323669	chr2:196323669:C:A	rs10171016	C	A	C	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr2	196602178	196602179	chr2:196602179:G:C	rs1879126	G	C	C	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr2	196828851	196828852	chr2:196828852:A:G	rs62185633	A	G	G	Hoxd9.mouse_homeodomain_1	5	1	+	8.027213970992095	1.6530242527455408	CACATAAAA
chr2	196988179	196988180	chr2:196988180:C:T	rs73066834	C	T	C	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr2	197307423	197307424	chr2:197307424:T:G	rs1366836	T	G	G	Hoxd9.mouse_homeodomain_1	4	1	+	7.9772278588234515	1.1354094114928457	GCAATAAAA
chr2	197435443	197435444	chr2:197435444:A:T	rs191494549	A	T	A	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr2	197798205	197798206	chr2:197798206:C:T	rs1239905253	C	T	C	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr2	197847585	197847586	chr2:197847586:C:A	rs700682	C	A	A	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr2	197847607	197847608	chr2:197847608:G:A	rs700683	G	A	A	Hoxd9.mouse_homeodomain_1	0	1	-	8.027213970992095	6.132666665683155	CACATAAAA
chr2	198386156	198386157	chr2:198386157:T:C	rs7583995	T	C	T	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr2	198441100	198441101	chr2:198441101:T:C	rs4241196	T	C	T	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr2	198881259	198881260	chr2:198881260:A:G	rs4674268	A	G	G	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr2	198962599	198962600	chr2:198962600:T:C	rs6714279	T	C	T	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr2	199125383	199125384	chr2:199125384:A:G	rs1451488	A	G	A	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr2	199224758	199224759	chr2:199224759:G:T	rs7559104	G	T	G	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr2	199431986	199431987	chr2:199431987:C:G	rs16831496	C	G	C	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr2	199625118	199625119	chr2:199625119:G:A	rs73986720	G	A	G	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr2	199738958	199738959	chr2:199738959:G:T	rs17529309	G	T	G	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr2	199738961	199738962	chr2:199738962:A:T	chr2:199738962:A:T	A	T	A	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr2	199808543	199808544	chr2:199808544:C:G	rs4673493	C	G	C	Hoxd9.mouse_homeodomain_1	0	1	+	8.409487817756228	8.099252595576761	CCCATTAAA
chr2	199902788	199902789	chr2:199902789:C:T	rs1658807	C	T	T	Hoxd9.mouse_homeodomain_1	0	1	-	8.678783717710262	7.889898683853121	GCCATAAAA
chr2	200156601	200156602	chr2:200156602:C:T	rs59695400	C	T	T	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr2	200172012	200172013	chr2:200172013:G:T	rs6752402	G	T	T	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr2	200384038	200384039	chr2:200384039:T:G	rs184811457	T	G	T	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr2	200477068	200477069	chr2:200477069:G:A	rs182862739	G	A	G	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr2	200483929	200483930	chr2:200483930:A:G	rs116287888	A	G	A	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr2	200845581	200845582	chr2:200845582:A:T	rs13028326	A	T	A	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr2	201262993	201262994	chr2:201262994:T:C	rs10084352	T	C	T	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr2	201860449	201860450	chr2:201860450:T:C	rs16838312	T	C	T	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr2	201936124	201936125	chr2:201936125:G:A	rs10188081	G	A	g	Hoxd9.mouse_homeodomain_1	8	1	-	7.1462160923678635	5.746270592944195	GCCATAAAC
chr2	202087084	202087085	chr2:202087085:T:C	rs76855343	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.287463081002919	6.953384481140425	CCAATAAAA
chr2	202130081	202130082	chr2:202130082:A:G	rs113614214	A	G	A	Hoxd9.mouse_homeodomain_1	4	1	-	8.099252595576761	5.444205950714182	GCCATTAAA
chr2	202169887	202169888	chr2:202169888:C:T	rs34949776	C	T	C	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr2	202237483	202237484	chr2:202237484:T:C	rs150045648	T	C	T	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr2	202682149	202682150	chr2:202682150:C:T	rs11675723	C	T	C	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr2	202687397	202687398	chr2:202687398:T:C	rs558757362	T	C	T	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr2	203631192	203631193	chr2:203631193:G:A	rs72932333	G	A	G	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr2	204030266	204030267	chr2:204030267:T:C	rs4143802	T	C	C	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr2	204074048	204074049	chr2:204074049:C:G	rs74499146	C	G	C	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr2	204259110	204259111	chr2:204259111:G:C	rs76785053	G	C	G	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr2	204264677	204264678	chr2:204264678:A:C	rs78784873	A	C	A	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr2	204530102	204530103	chr2:204530103:A:G	rs10179665	A	G	A	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr2	204696399	204696400	chr2:204696400:A:C	rs77052492	A	C	A	Hoxd9.mouse_homeodomain_1	5	1	-	8.409487817756228	2.6148292216431743	CCCATTAAA
chr2	204869155	204869156	chr2:204869156:T:G	rs78578260	T	G	T	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr2	205169595	205169596	chr2:205169596:G:T	rs17188611	G	T	G	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr2	205747989	205747990	chr2:205747990:G:A	rs12472412	G	A	G	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr2	205766893	205766894	chr2:205766894:C:A	rs13001214	C	A	C	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr2	206052140	206052141	chr2:206052141:A:G	rs192817210	A	G	A	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr2	206257731	206257732	chr2:206257732:T:G	rs6758840	T	G	T	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr2	206833213	206833214	chr2:206833214:T:G	rs34522563	T	G	T	Hoxd9.mouse_homeodomain_1	7	1	-	7.9772278588234515	5.087812088792866	GCAATAAAA
chr2	206993423	206993424	chr2:206993424:A:G	rs1453170	A	G	A	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr2	207082985	207082986	chr2:207082986:G:A	rs114547709	G	A	G	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr2	207083119	207083120	chr2:207083120:G:T	rs73983159	G	T	G	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr2	207153992	207153993	chr2:207153993:G:A	rs971163	G	A	G	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr2	207181826	207181827	chr2:207181827:C:T	rs75861751	C	T	C	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr2	207257977	207257978	chr2:207257978:G:A	rs930315363	G	A	G	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr2	207394779	207394780	chr2:207394780:G:A	rs78828466	G	A	G	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr2	207394785	207394786	chr2:207394786:A:G	rs76224932	A	G	A	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr2	207517710	207517711	chr2:207517711:C:T	rs2709368	C	T	C	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr2	207704856	207704857	chr2:207704857:C:T	rs10173915	C	T	C	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr2	207970975	207970976	chr2:207970976:G:T	rs13025100	G	T	G	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr2	208371646	208371647	chr2:208371647:G:A	rs35444703	G	A	G	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr2	208807430	208807431	chr2:208807431:C:G	rs10176943	C	G	C	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr2	208985404	208985405	chr2:208985405:G:A	rs10173310	G	A	A	Hoxd9.mouse_homeodomain_1	0	1	-	8.409487817756228	6.514940512447287	CCCATTAAA
chr2	208989135	208989136	chr2:208989136:G:C	chr2:208989136:G:C	G	C	G	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr2	209380220	209380221	chr2:209380221:C:A	rs7602104	C	A	C	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr2	209426381	209426382	chr2:209426382:A:T	rs7595924	A	T	T	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr2	210169632	210169633	chr2:210169633:A:G	rs186066938	A	G	A	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr2	210584792	210584793	chr2:210584793:C:T	rs116108219	C	T	C	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr2	210971623	210971624	chr2:210971624:C:A	rs116696338	C	A	C	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr2	211061877	211061878	chr2:211061878:G:A	rs9917344	G	A	A	Hoxd9.mouse_homeodomain_1	1	1	-	8.287463081002919	6.972661166669912	CCAATAAAA
chr2	211132730	211132731	chr2:211132731:G:C	rs10201572	G	C	G	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr2	211174833	211174834	chr2:211174834:A:T	rs4672606	A	T	A	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr2	211750790	211750791	chr2:211750791:T:C	rs6757068	T	C	T	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr2	211868438	211868439	chr2:211868439:A:G	rs13002674	A	G	A	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr2	211905087	211905088	chr2:211905088:C:T	rs13389940	C	T	t	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr2	212005240	212005241	chr2:212005241:T:C	rs113435200	T	C	T	Hoxd9.mouse_homeodomain_1	4	1	+	7.212456609225008	4.557409964362429	GCCATAAAG
chr2	212024726	212024727	chr2:212024727:G:C	rs1521538	G	C	C	Hoxd9.mouse_homeodomain_1	0	1	+	7.716978748812629	8.027213970992095	GACATAAAA
chr2	212110667	212110668	chr2:212110668:C:G	rs6435691	C	G	C	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr2	212150121	212150122	chr2:212150122:A:G	rs145417607	A	G	A	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr2	212520419	212520420	chr2:212520420:C:T	rs1384295	C	T	T	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr2	212714052	212714053	chr2:212714053:A:G	rs13393014	A	G	A	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr2	212720956	212720957	chr2:212720957:C:T	rs147106384	C	T	C	Hoxd9.mouse_homeodomain_1	2	1	+	7.716978748812629	1.2295382911889927	GACATAAAA
chr2	212720968	212720969	chr2:212720969:C:T	rs4673678	C	T	C	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr2	212854073	212854074	chr2:212854074:C:G	rs12620000	C	G	C	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr2	213195007	213195008	chr2:213195008:T:C	rs116385512	T	C	T	Hoxd9.mouse_homeodomain_1	8	1	-	8.027213970992095	6.560886862506841	CACATAAAA
chr2	213688265	213688266	chr2:213688266:A:G	rs141640468	A	G	A	Hoxd9.mouse_homeodomain_1	7	1	+	8.099252595576761	1.3954266489850298	GCCATTAAA
chr2	213688492	213688493	chr2:213688493:A:G	rs1986978	A	G	G	Hoxd9.mouse_homeodomain_1	3	1	+	8.027213970992095	6.693135371129603	CACATAAAA
chr2	213949707	213949708	chr2:213949708:C:T	rs1397358	C	T	T	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr2	213949729	213949730	chr2:213949730:G:A	rs73990006	G	A	G	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr2	214084851	214084852	chr2:214084852:A:G	rs17813988	A	G	A	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr2	214283914	214283915	chr2:214283915:G:A	rs1912198	G	A	A	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr2	214377182	214377183	chr2:214377183:T:C	rs7420670	T	C	C	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr2	214649836	214649837	chr2:214649837:C:A	rs746535303	C	A	C	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr2	214649843	214649844	chr2:214649844:G:A	rs13026148	G	A	G	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr2	214807676	214807677	chr2:214807677:T:C	rs73989370	T	C	T	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr2	214816185	214816186	chr2:214816186:A:G	rs12617559	A	G	A	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr2	214890164	214890165	chr2:214890165:A:G	rs7602290	A	G	G	Hoxd9.mouse_homeodomain_1	3	1	+	7.091711387329735	5.757632787467242	CCCATCAAA
chr2	215436450	215436451	chr2:215436451:T:C	rs527990487	T	C	T	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr2	215436553	215436554	chr2:215436554:A:G	rs191634938	A	G	A	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr2	215737220	215737221	chr2:215737221:G:C	rs74910161	G	C	G	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr2	215803551	215803552	chr2:215803552:G:A	rs142215263	G	A	G	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr2	215850993	215850994	chr2:215850994:A:G	rs553430963	A	G	A	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr2	215860939	215860940	chr2:215860940:C:T	rs4422154	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	+	8.287463081002919	6.392915775693977	CCAATAAAA
chr2	215886039	215886040	chr2:215886040:A:G	rs72944517	A	G	.	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr2	215928375	215928376	chr2:215928376:C:T	rs59913318	C	T	C	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr2	216090611	216090612	chr2:216090612:T:C	rs828920	T	C	C	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr2	216120125	216120126	chr2:216120126:G:C	rs187355963	G	C	G	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr2	216282167	216282168	chr2:216282168:G:A	rs753372637	G	A	G	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr2	216282190	216282191	chr2:216282191:G:A	rs207818	G	A	A	Hoxd9.mouse_homeodomain_1	1	1	-	7.212456609225008	5.897654694892	GCCATAAAG
chr2	216492778	216492779	chr2:216492779:A:G	rs74972726	A	G	A	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr2	216503891	216503892	chr2:216503892:C:T	rs284540	C	T	C	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr2	216659143	216659144	chr2:216659144:A:C	rs79218491	A	C	A	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr2	216659165	216659166	chr2:216659166:G:A	rs9341192	G	A	G	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr2	216760607	216760608	chr2:216760608:C:A	rs11691253	C	A	C	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr2	217046186	217046187	chr2:217046187:T:G	rs6723013	T	G	g	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr2	217077066	217077067	chr2:217077067:C:G	rs13000732	C	G	C	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr2	217095789	217095790	chr2:217095790:G:A	rs16856918	G	A	G	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr2	217203000	217203001	chr2:217203001:A:G	rs73989783	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.98901893988973	7.654940340027237	CCCATAAAA
chr2	217363625	217363626	chr2:217363626:T:C	rs7561131	T	C	t	Hoxd9.mouse_homeodomain_1	3	1	-	7.45645131454733	6.122372714684838	CCCATAAAC
chr2	217367679	217367680	chr2:217367680:G:A	rs73077683	G	A	G	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr2	217367723	217367724	chr2:217367724:A:G	chr2:217367724:A:G	A	G	A	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr2	217437217	217437218	chr2:217437218:T:C	rs13035369	T	C	T	Hoxd9.mouse_homeodomain_1	4	1	+	7.9772278588234515	5.3221812139608735	GCAATAAAA
chr2	217521228	217521229	chr2:217521229:G:A	rs718686	G	A	A	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr2	217551689	217551690	chr2:217551690:T:C	rs1388265351	T	C	T	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr2	217551707	217551708	chr2:217551708:T:C	rs768493202	T	C	T	Hoxd9.mouse_homeodomain_1	4	1	+	8.98901893988973	6.333972295027152	CCCATAAAA
chr2	217551717	217551718	chr2:217551718:C:T	rs889289052	C	T	C	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr2	217572192	217572193	chr2:217572193:C:T	rs6435991	C	T	T	Hoxd9.mouse_homeodomain_1	0	1	+	8.027213970992095	6.132666665683155	CACATAAAA
chr2	217787160	217787161	chr2:217787161:A:G	rs62183709	A	G	A	Hoxd9.mouse_homeodomain_1	5	1	+	7.716978748812629	1.3427890305660735	GACATAAAA
chr2	218059425	218059426	chr2:218059426:A:G	rs73082355	A	G	G	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr2	218074542	218074543	chr2:218074543:G:T	rs4674245	G	T	G	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr2	218144618	218144619	chr2:218144619:A:T	rs12991530	A	T	A	Hoxd9.mouse_homeodomain_1	3	1	+	7.1462160923678635	5.142734955559218	GCCATAAAC
chr2	218290057	218290058	chr2:218290058:G:A	rs992157	G	A	G	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr2	218472235	218472236	chr2:218472236:T:A	rs833083	T	A	T	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr2	218895928	218895929	chr2:218895929:T:G	rs73084777	T	G	G	Hoxd9.mouse_homeodomain_1	8	1	-	7.241935125048919	5.709367499706518	CCCATACAA
chr2	219109429	219109430	chr2:219109430:G:T	rs10175081	G	T	G	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr2	219159617	219159618	chr2:219159618:C:T	rs5006768	C	T	T	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr2	219266167	219266168	chr2:219266168:G:A	rs62191852	G	A	G	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr2	219295424	219295425	chr2:219295425:C:T	chr2:219295425:C:T	C	T	C	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr2	219498787	219498788	chr2:219498788:T:C	rs998050188	T	C	T	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr2	219656879	219656880	chr2:219656880:G:T	rs628917	G	T	T	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr2	219771153	219771154	chr2:219771154:G:A	rs10205517	G	A	G	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr2	219783342	219783343	chr2:219783343:C:T	chr2:219783343:C:T	C	T	C	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr2	219845113	219845114	chr2:219845114:A:T	rs59312350	A	T	A	Hoxd9.mouse_homeodomain_1	4	1	-	8.099252595576761	1.2574341482461548	GCCATTAAA
chr2	219964443	219964444	chr2:219964444:G:A	rs13005658	G	A	G	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr2	220188211	220188212	chr2:220188212:G:T	rs56707704	G	T	G	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr2	220226718	220226719	chr2:220226719:T:C	rs72613784	T	C	t	Hoxd9.mouse_homeodomain_1	3	1	-	8.287463081002919	6.953384481140425	CCAATAAAA
chr2	220241482	220241483	chr2:220241483:A:G	rs67718827	A	G	A	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr2	220357966	220357967	chr2:220357967:C:T	rs16861107	C	T	C	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr2	220425000	220425001	chr2:220425001:C:T	rs4629147	C	T	C	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr2	220469102	220469103	chr2:220469103:G:A	rs6436212	G	A	A	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr2	220503599	220503600	chr2:220503600:A:C	rs13020102	A	C	A	Hoxd9.mouse_homeodomain_1	7	1	+	8.678783717710262	5.789367947679677	GCCATAAAA
chr2	220505443	220505444	chr2:220505444:A:G	rs73091411	A	G	G	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr2	220779647	220779648	chr2:220779648:C:G	rs13018805	C	G	C	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr2	220969569	220969570	chr2:220969570:C:T	rs574105201	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	-	7.9772278588234515	7.188342824966311	GCAATAAAA
chr2	221002177	221002178	chr2:221002178:C:A	rs6747964	C	A	C	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr2	221005430	221005431	chr2:221005431:G:A	rs76874499	G	A	G	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr2	221124712	221124713	chr2:221124713:T:A	rs539832165	T	A	T	Hoxd9.mouse_homeodomain_1	7	1	-	8.409487817756228	6.662404002915416	CCCATTAAA
chr2	221350999	221351000	chr2:221351000:G:A	rs6720907	G	A	A	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr2	221444308	221444309	chr2:221444309:A:G	rs145247690	A	G	A	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr2	221553729	221553730	chr2:221553730:T:C	rs143420837	T	C	T	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr2	221726743	221726744	chr2:221726744:T:C	rs73993274	T	C	C	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr2	222006266	222006267	chr2:222006267:A:T	rs11889908	A	T	A	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr2	222243577	222243578	chr2:222243578:A:G	rs6436303	A	G	G	Hoxd9.mouse_homeodomain_1	3	1	+	7.091711387329735	5.757632787467242	CCCATCAAA
chr2	222863573	222863574	chr2:222863574:T:G	rs13006287	T	G	t	Hoxd9.mouse_homeodomain_1	5	1	-	8.027213970992095	6.1299064184321015	CACATAAAA
chr2	222955306	222955307	chr2:222955307:T:C	rs7607175	T	C	T	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr2	223113313	223113314	chr2:223113314:T:G	rs6436379	T	G	T	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr2	223162236	223162237	chr2:223162237:G:A	rs1868295	G	A	G	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr2	223167525	223167526	chr2:223167526:G:A	rs139336616	G	A	g	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr2	223190901	223190902	chr2:223190902:G:A	rs11689139	G	A	g	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr2	223284348	223284349	chr2:223284349:G:A	rs7593045	G	A	G	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr2	223495231	223495232	chr2:223495232:T:C	rs78615335	T	C	T	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr2	223501741	223501742	chr2:223501742:A:G	rs1371552	A	G	G	Hoxd9.mouse_homeodomain_1	4	1	-	7.889898683853121	5.234852038990543	ACCATAAAA
chr2	223903204	223903205	chr2:223903205:T:C	rs147401800	T	C	T	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr2	224056207	224056208	chr2:224056208:G:A	rs3957256	G	A	G	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr2	224073381	224073382	chr2:224073382:G:A	rs112004366	G	A	G	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr2	224286937	224286938	chr2:224286938:T:C	rs1008415	T	C	T	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr2	224309265	224309266	chr2:224309266:T:A	rs2013796	T	A	T	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr2	224382327	224382328	chr2:224382328:C:A	rs55650784	C	A	c	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr2	224434445	224434446	chr2:224434446:C:T	rs12997147	C	T	T	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr2	224469386	224469387	chr2:224469387:T:C	rs11681451	T	C	T	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr2	224820632	224820633	chr2:224820633:C:A	rs564512230	C	A	C	Hoxd9.mouse_homeodomain_1	0	1	+	8.027213970992095	6.928093714955487	CACATAAAA
chr2	224999874	224999875	chr2:224999875:T:C	rs116324446	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.9772278588234515	6.643149258960959	GCAATAAAA
chr2	225022888	225022889	chr2:225022889:G:A	rs609615	G	A	A	Hoxd9.mouse_homeodomain_1	6	1	-	7.241935125048919	6.099603169859144	CCCATACAA
chr2	225041975	225041976	chr2:225041976:G:A	rs115994928	G	A	G	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr2	225064383	225064384	chr2:225064384:G:A	rs419473	G	A	G	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr2	225113680	225113681	chr2:225113681:T:C	rs11680753	T	C	C	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr2	225179628	225179629	chr2:225179629:A:G	rs11679128	A	G	G	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr2	225260440	225260441	chr2:225260441:G:A	rs11886244	G	A	A	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr2	225376330	225376331	chr2:225376331:G:A	rs932182	G	A	G	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr2	225511413	225511414	chr2:225511414:T:C	rs6716521	T	C	T	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr2	225928351	225928352	chr2:225928352:C:T	rs11890158	C	T	C	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr2	226001963	226001964	chr2:226001964:G:A	rs13428728	G	A	G	Hoxd9.mouse_homeodomain_1	6	1	-	7.241935125048919	6.099603169859144	CCCATACAA
chr2	226080308	226080309	chr2:226080309:G:C	chr2:226080309:G:C	G	C	G	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr2	226124439	226124440	chr2:226124440:A:C	rs1522804	A	C	C	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr2	226436143	226436144	chr2:226436144:G:A	rs6754059	G	A	G	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr2	226445501	226445502	chr2:226445502:A:G	rs79629786	A	G	A	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr2	226548946	226548947	chr2:226548947:G:T	rs56960665	G	T	G	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr2	226586895	226586896	chr2:226586896:A:G	rs10192296	A	G	A	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr2	226665727	226665728	chr2:226665728:C:T	rs6712027	C	T	C	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr2	226711764	226711765	chr2:226711765:T:C	rs75541728	T	C	T	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr2	226978293	226978294	chr2:226978294:C:T	rs4675133	C	T	C	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr2	227230235	227230236	chr2:227230236:G:A	rs62277839	G	A	G	Hoxd9.mouse_homeodomain_1	3	1	+	7.34470511784777	8.678783717710262	GCCGTAAAA
chr2	227321092	227321093	chr2:227321093:A:G	rs10173844	A	G	a	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr2	227364389	227364390	chr2:227364390:G:C	rs57440161	G	C	C	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr2	228117636	228117637	chr2:228117637:A:G	rs6724995	A	G	G	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr2	228198524	228198525	chr2:228198525:G:C	rs10169859	G	C	C	Hoxd9.mouse_homeodomain_1	2	1	-	7.716978748812629	4.248987091360299	GACATAAAA
chr2	228408067	228408068	chr2:228408068:A:G	rs978212	A	G	A	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr2	228486437	228486438	chr2:228486438:G:A	rs4973087	G	A	G	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr2	228916921	228916922	chr2:228916922:C:T	rs11895004	C	T	C	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr2	228938564	228938565	chr2:228938565:T:C	rs72987241	T	C	T	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr2	229044918	229044919	chr2:229044919:G:A	rs6717417	G	A	A	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr2	229070213	229070214	chr2:229070214:A:T	rs4973154	A	T	A	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr2	229124312	229124313	chr2:229124313:C:T	rs1319273	C	T	C	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr2	229143533	229143534	chr2:229143534:C:A	rs6436851	C	A	A	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr2	229420098	229420099	chr2:229420099:T:C	rs2396663	T	C	T	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr2	229821566	229821567	chr2:229821567:A:T	rs73099295	A	T	A	Hoxd9.mouse_homeodomain_1	6	1	+	8.287463081002919	5.398047310972334	CCAATAAAA
chr2	230129110	230129111	chr2:230129111:G:T	rs7596339	G	T	G	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr2	230157579	230157580	chr2:230157580:G:A	rs1427289	G	A	G	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr2	230178762	230178763	chr2:230178763:C:G	rs35574529	C	G	C	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr2	230318696	230318697	chr2:230318697:A:G	rs720976	A	G	g	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr2	230542130	230542131	chr2:230542131:G:A	rs10199013	G	A	.	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr2	230611816	230611817	chr2:230611817:T:C	rs59670032	T	C	T	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr2	230614240	230614241	chr2:230614241:G:A	rs76253040	G	A	G	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr2	230655613	230655614	chr2:230655614:T:C	rs190213445	T	C	T	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr2	230669515	230669516	chr2:230669516:C:T	rs75765180	C	T	C	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr2	230678828	230678829	chr2:230678829:A:G	rs10177094	A	G	g	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr2	230777755	230777756	chr2:230777756:G:A	rs6750664	G	A	A	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr2	230821790	230821791	chr2:230821791:T:G	rs115598025	T	G	T	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr2	230866519	230866520	chr2:230866520:A:G	rs10199445	A	G	A	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr2	230887676	230887677	chr2:230887677:C:T	rs76838249	C	T	C	Hoxd9.mouse_homeodomain_1	2	1	+	7.241935125048919	0.7544946674252814	CCCATACAA
chr2	230894765	230894766	chr2:230894766:C:T	rs146822792	C	T	C	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr2	230958251	230958252	chr2:230958252:T:A	rs184975257	T	A	T	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr2	231052697	231052698	chr2:231052698:T:C	rs115961793	T	C	T	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr2	231168395	231168396	chr2:231168396:G:A	rs189929827	G	A	G	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr2	231348903	231348904	chr2:231348904:A:G	rs116420247	A	G	A	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr2	231365387	231365388	chr2:231365388:G:A	rs138450408	G	A	G	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr2	231617908	231617909	chr2:231617909:T:C	rs4973454	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.98901893988973	7.654940340027237	CCCATAAAA
chr2	231893244	231893245	chr2:231893245:C:T	rs146175816	C	T	C	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr2	231940744	231940745	chr2:231940745:A:C	rs753358223	A	C	A	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr2	232288716	232288717	chr2:232288717:G:A	rs184508753	G	A	G	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr2	232290855	232290856	chr2:232290856:T:C	rs6718438	T	C	C	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr2	232315353	232315354	chr2:232315354:C:G	rs76836735	C	G	C	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr2	232445266	232445267	chr2:232445267:T:C	rs790042	T	C	C	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr2	232445303	232445304	chr2:232445304:C:T	rs67171963	C	T	C	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr2	232465381	232465382	chr2:232465382:G:A	rs114451699	G	A	G	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr2	232694601	232694602	chr2:232694602:T:C	rs10933406	T	C	c	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr2	232929117	232929118	chr2:232929118:C:T	rs13386708	C	T	C	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr2	233036143	233036144	chr2:233036144:G:T	rs28431202	G	T	T	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr2	233036146	233036147	chr2:233036147:G:A	rs374566933	G	A	G	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr2	233234597	233234598	chr2:233234598:A:G	rs7563345	A	G	G	Hoxd9.mouse_homeodomain_1	6	1	+	7.212456609225008	0.5086306626332764	GCCATAAAG
chr2	233361045	233361046	chr2:233361046:T:G	rs11676845	T	G	T	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr2	233966788	233966789	chr2:233966789:A:G	rs12185625	A	G	A	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr2	234026215	234026216	chr2:234026216:C:G	rs17874960	C	G	C	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr2	234241148	234241149	chr2:234241149:G:A	rs113197087	G	A	G	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr2	234309266	234309267	chr2:234309267:A:G	rs11886494	A	G	A	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr2	234401201	234401202	chr2:234401202:T:C	rs72971681	T	C	C	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr2	234425452	234425453	chr2:234425453:C:T	rs80281256	C	T	c	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr2	234495144	234495145	chr2:234495145:T:A	rs113211016	T	A	T	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr2	234495151	234495152	chr2:234495152:T:A	rs6719230	T	A	-	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr2	234499864	234499865	chr2:234499865:A:G	rs72975520	A	G	A	Hoxd9.mouse_homeodomain_1	1	1	+	8.027213970992095	2.5794857111073646	CACATAAAA
chr2	234591748	234591749	chr2:234591749:C:G	rs55633687	C	G	C	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr2	234591755	234591756	chr2:234591756:C:T	rs55658291	C	T	C	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr2	234594278	234594279	chr2:234594279:G:A	rs7574244	G	A	A	Hoxd9.mouse_homeodomain_1	1	1	-	7.1462160923678635	5.831414178034855	GCCATAAAC
chr2	234633785	234633786	chr2:234633786:C:T	rs13402575	C	T	C	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr2	234679203	234679204	chr2:234679204:C:T	rs12692152	C	T	T	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr2	234684828	234684829	chr2:234684829:T:C	rs2119659	T	C	C	Hoxd9.mouse_homeodomain_1	3	1	-	7.212456609225008	5.878378009362515	GCCATAAAG
chr2	234709099	234709100	chr2:234709100:A:T	rs11884480	A	T	A	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr2	234723885	234723886	chr2:234723886:A:G	rs114492535	A	G	A	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr2	234789076	234789077	chr2:234789077:T:A	rs6431300	T	A	A	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr2	234993664	234993665	chr2:234993665:G:T	rs56838198	G	T	T	Hoxd9.mouse_homeodomain_1	2	1	-	7.716978748812629	7.0154228899258175	GACATAAAA
chr2	235037234	235037235	chr2:235037235:T:A	rs6739712	T	A	A	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr2	235053308	235053309	chr2:235053309:G:A	rs28403580	G	A	G	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr2	235053327	235053328	chr2:235053328:A:G	rs7606553	A	G	A	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr2	235055048	235055049	chr2:235055049:A:G	rs75556478	A	G	G	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr2	235059412	235059413	chr2:235059413:T:G	rs77402002	T	G	T	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr2	235217925	235217926	chr2:235217926:A:G	rs6727436	A	G	G	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr2	235333078	235333079	chr2:235333079:C:T	rs10929125	C	T	T	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr2	235364960	235364961	chr2:235364961:C:T	rs115278620	C	T	C	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr2	235654506	235654507	chr2:235654507:G:A	rs2316912	G	A	A	Hoxd9.mouse_homeodomain_1	2	1	-	8.409487817756228	1.922047360132591	CCCATTAAA
chr2	235703988	235703989	chr2:235703989:A:G	rs75200497	A	G	A	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr2	235725950	235725951	chr2:235725951:A:G	rs1009987088	A	G	A	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr2	235945386	235945387	chr2:235945387:G:A	rs79151386	G	A	G	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr2	236036075	236036076	chr2:236036076:C:G	rs2123510	C	G	C	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr2	236049696	236049697	chr2:236049697:A:G	rs61003070	A	G	A	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr2	236114826	236114827	chr2:236114827:C:G	chr2:236114827:C:G	C	G	C	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr2	236302421	236302422	chr2:236302422:T:A	rs73130911	T	A	T	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr2	236564930	236564931	chr2:236564931:A:T	rs6743952	A	T	T	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr2	236572283	236572284	chr2:236572284:C:A	rs541052360	C	A	C	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr2	236593250	236593251	chr2:236593251:T:C	rs62189826	T	C	C	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr2	236647824	236647825	chr2:236647825:A:G	rs149324014	A	G	A	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr2	236659843	236659844	chr2:236659844:C:A	rs2600727	C	A	A	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr2	236667292	236667293	chr2:236667293:A:G	rs113688329	A	G	G	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr2	236721292	236721293	chr2:236721293:C:T	rs115807601	C	T	C	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr2	236856715	236856716	chr2:236856716:C:T	rs7581272	C	T	C	Hoxd9.mouse_homeodomain_1	3	1	-	7.34470511784777	8.678783717710262	GCCGTAAAA
chr2	236856737	236856738	chr2:236856738:G:A	rs116079918	G	A	G	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr2	236872549	236872550	chr2:236872550:G:A	rs4077980	G	A	A	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr2	236911331	236911332	chr2:236911332:C:G	rs145598410	C	G	C	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr2	236941355	236941356	chr2:236941356:G:A	rs79532807	G	A	G	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr2	237005011	237005012	chr2:237005012:C:G	rs2573715	C	G	C	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr2	237062392	237062393	chr2:237062393:C:A	rs58678188	C	A	A	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr2	237182510	237182511	chr2:237182511:G:A	rs11883572	G	A	A	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr2	237351492	237351493	chr2:237351493:G:T	rs73998881	G	T	G	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr2	237618550	237618551	chr2:237618551:C:T	rs182062912	C	T	C	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr2	237644081	237644082	chr2:237644082:G:C	rs12692205	G	C	C	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr2	237696525	237696526	chr2:237696526:G:A	rs551278911	G	A	G	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr2	237748825	237748826	chr2:237748826:G:A	rs113636785	G	A	G	Hoxd9.mouse_homeodomain_1	0	1	+	7.212456609225008	6.423571575367866	GCCATAAAG
chr2	237879621	237879622	chr2:237879622:A:G	rs75711982	A	G	A	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr2	237883360	237883361	chr2:237883361:A:G	rs11898345	A	G	G	Hoxd9.mouse_homeodomain_1	4	1	-	8.98901893988973	6.333972295027152	CCCATAAAA
chr2	237961940	237961941	chr2:237961941:A:C	rs1446929	A	C	A	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr2	238106020	238106021	chr2:238106021:G:T	rs10199495	G	T	G	Hoxd9.mouse_homeodomain_1	2	1	-	7.45645131454733	6.75489545566052	CCCATAAAC
chr2	238209254	238209255	chr2:238209255:G:T	rs35440069	G	T	G	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr2	238220946	238220947	chr2:238220947:T:C	rs185966518	T	C	T	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr2	238220984	238220985	chr2:238220985:A:T	rs13396611	A	T	A	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr2	238332054	238332055	chr2:238332055:T:C	rs57866457	T	C	C	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr2	238656614	238656615	chr2:238656615:G:A	rs907106	G	A	G	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr2	238732352	238732353	chr2:238732353:A:T	rs4663952	A	T	T	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr2	238856105	238856106	chr2:238856106:C:T	rs36132310	C	T	c	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr2	238942813	238942814	chr2:238942814:C:T	rs11681016	C	T	T	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr2	238942822	238942823	chr2:238942823:G:A	rs6749150	G	A	A	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr2	238942849	238942850	chr2:238942850:G:A	rs113066407	G	A	G	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr2	238944553	238944554	chr2:238944554:G:A	rs10207578	G	A	G	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr2	239041550	239041551	chr2:239041551:A:T	rs11884496	A	T	A	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr2	239222175	239222176	chr2:239222176:C:T	rs3791610	C	T	C	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr2	239348901	239348902	chr2:239348902:G:A	rs138026579	G	A	G	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr2	239485559	239485560	chr2:239485560:T:A	rs62180919	T	A	T	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr2	239524081	239524082	chr2:239524082:G:T	rs187650424	G	T	G	Hoxd9.mouse_homeodomain_1	8	1	-	7.1462160923678635	8.678783717710262	GCCATAAAC
chr2	239810899	239810900	chr2:239810900:C:T	rs11124232	C	T	C	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr2	239898216	239898217	chr2:239898217:A:C	rs72999707	A	C	C	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr2	239898218	239898219	chr2:239898219:T:C	rs72999711	T	C	C	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr2	239943313	239943314	chr2:239943314:T:C	rs77027641	T	C	T	Hoxd9.mouse_homeodomain_1	8	1	-	8.287463081002919	6.821135972517665	CCAATAAAA
chr2	239943941	239943942	chr2:239943942:A:C	rs7609200	A	C	A	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr2	240143679	240143680	chr2:240143680:C:T	rs72997330	C	T	C	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr2	240143711	240143712	chr2:240143712:G:A	rs367926126	G	A	g	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr2	240251037	240251038	chr2:240251038:C:T	rs189811965	C	T	C	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr2	240318253	240318254	chr2:240318254:A:G	rs62185177	A	G	G	Hoxd9.mouse_homeodomain_1	4	1	-	7.091711387329735	4.436664742467157	CCCATCAAA
chr2	240646224	240646225	chr2:240646225:G:A	rs35390471	G	A	G	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr2	240654849	240654850	chr2:240654850:C:T	rs138432025	C	T	C	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr2	240655675	240655676	chr2:240655676:G:A	rs74991608	G	A	G	Hoxd9.mouse_homeodomain_1	0	1	+	7.716978748812629	6.928093714955487	GACATAAAA
chr2	240969651	240969652	chr2:240969652:T:C	rs56327669	T	C	T	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr2	240971390	240971391	chr2:240971391:T:A	rs13413961	T	A	T	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr2	240974923	240974924	chr2:240974924:A:G	rs10804401	A	G	G	Hoxd9.mouse_homeodomain_1	4	1	-	7.9772278588234515	5.3221812139608735	GCAATAAAA
chr2	241006896	241006897	chr2:241006897:A:G	rs11888015	A	G	G	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr2	241078452	241078453	chr2:241078453:C:T	rs58581774	C	T	T	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr2	241452313	241452314	chr2:241452314:C:T	rs115951655	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	+	7.241935125048919	5.347387819739977	CCCATACAA
chr2	241536033	241536034	chr2:241536034:C:T	rs13423757	C	T	T	Hoxd9.mouse_homeodomain_1	2	1	+	7.716978748812629	1.2295382911889927	GACATAAAA
chr2	241795603	241795604	chr2:241795604:G:A	rs561889693	G	A	G	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr2	241795616	241795617	chr2:241795617:T:A	rs115306129	T	A	T	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr2	241829563	241829564	chr2:241829564:A:G	rs11676038	A	G	-	Hoxd9.mouse_homeodomain_1	5	1	+	8.678783717710262	2.304593999463707	GCCATAAAA
chr2	241833476	241833477	chr2:241833477:G:A	rs74898709	G	A	-	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr2	241935965	241935966	chr2:241935966:A:G	rs554660159	A	G	.	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr2	241935971	241935972	chr2:241935972:A:T	rs10179800	A	T	.	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr2	241973750	241973751	chr2:241973751:A:G	rs66964681	A	G	.	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr2	241973768	241973769	chr2:241973769:A:G	rs35119495	A	G	.	Hoxd9.mouse_homeodomain_1	4	1	-	8.98901893988973	6.333972295027152	CCCATAAAA
chr20	267040	267041	chr20:267041:C:G	chr20:267041:C:G	C	G	A	Hoxd9.mouse_homeodomain_1	2	1	+	7.34470511784777	3.8767134603954396	GCCGTAAAA
chr20	327544	327545	chr20:327545:G:C	rs1047506	G	C	C	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr20	327548	327549	chr20:327549:A:G	rs1047507	A	G	A	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr20	366710	366711	chr20:366711:C:G	rs6037435	C	G	G	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr20	537212	537213	chr20:537213:A:G	rs2734228	A	G	A	Hoxd9.mouse_homeodomain_1	6	1	+	8.027213970992095	1.3233880244003648	CACATAAAA
chr20	564563	564564	chr20:564564:T:G	rs204697	T	G	t	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr20	620578	620579	chr20:620579:C:T	rs34536900	C	T	C	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr20	732532	732533	chr20:732533:T:C	rs6077036	T	C	C	Hoxd9.mouse_homeodomain_1	8	1	-	8.98901893988973	7.522691831404475	CCCATAAAA
chr20	940108	940109	chr20:940109:A:G	rs511582	A	G	G	Hoxd9.mouse_homeodomain_1	4	1	-	7.091711387329735	4.436664742467157	CCCATCAAA
chr20	940118	940119	chr20:940119:T:G	rs73602196	T	G	T	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr20	953856	953857	chr20:953857:G:T	rs6056178	G	T	G	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr20	1021161	1021162	chr20:1021162:C:T	rs4816143	C	T	C	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr20	1058094	1058095	chr20:1058095:C:T	rs73573790	C	T	C	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr20	1151864	1151865	chr20:1151865:G:A	rs78215051	G	A	G	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr20	1155572	1155573	chr20:1155573:G:A	rs12479880	G	A	G	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr20	1330043	1330044	chr20:1330044:C:T	rs13044351	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	-	8.678783717710262	7.889898683853121	GCCATAAAA
chr20	1341483	1341484	chr20:1341484:G:A	rs552634782	G	A	G	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr20	1415148	1415149	chr20:1415149:A:C	rs8124053	A	C	A	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr20	1494227	1494228	chr20:1494228:C:A	rs78187560	C	A	C	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr20	1565210	1565211	chr20:1565211:C:T	rs16995228	C	T	C	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr20	1672017	1672018	chr20:1672018:A:G	rs2023563	A	G	G	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr20	1718753	1718754	chr20:1718754:C:G	rs59027828	C	G	C	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr20	1820882	1820883	chr20:1820883:G:T	rs927111	G	T	G	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr20	1920314	1920315	chr20:1920315:C:T	rs6111988	C	T	C	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr20	1945628	1945629	chr20:1945629:C:T	rs6136501	C	T	C	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr20	2180930	2180931	chr20:2180931:A:C	rs6106334	A	C	C	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr20	2180964	2180965	chr20:2180965:A:G	rs6113135	A	G	A	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr20	2246005	2246006	chr20:2246006:T:A	rs62192610	T	A	T	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr20	2338780	2338781	chr20:2338781:A:C	rs545422773	A	C	A	Hoxd9.mouse_homeodomain_1	7	1	+	8.678783717710262	5.789367947679677	GCCATAAAA
chr20	2396273	2396274	chr20:2396274:T:A	rs6106621	T	A	T	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr20	2415589	2415590	chr20:2415590:G:A	rs6036404	G	A	G	Hoxd9.mouse_homeodomain_1	0	1	-	7.091711387329735	5.197164082020794	CCCATCAAA
chr20	2767998	2767999	chr20:2767999:G:A	rs57266265	G	A	G	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr20	2775227	2775228	chr20:2775228:A:G	rs574109435	A	G	A	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr20	2820154	2820155	chr20:2820155:A:C	rs7360412	A	C	C	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr20	2879576	2879577	chr20:2879577:C:G	rs61091656	C	G	G	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr20	3093625	3093626	chr20:3093626:G:A	rs142969032	G	A	G	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr20	3393647	3393648	chr20:3393648:C:T	rs239487	C	T	T	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr20	3469987	3469988	chr20:3469988:A:G	rs11696647	A	G	a	Hoxd9.mouse_homeodomain_1	3	1	+	7.889898683853121	6.555820083990628	ACCATAAAA
chr20	3478398	3478399	chr20:3478399:T:C	rs542544901	T	C	t	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr20	3686973	3686974	chr20:3686974:G:A	rs183972530	G	A	G	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr20	3686979	3686980	chr20:3686980:G:A	rs1348846953	G	A	G	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr20	3687014	3687015	chr20:3687015:C:T	rs754875848	C	T	C	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr20	3777536	3777537	chr20:3777537:T:A	rs3746642	T	A	T	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr20	3826276	3826277	chr20:3826277:A:G	rs6052102	A	G	G	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr20	3935846	3935847	chr20:3935847:T:C	rs181806262	T	C	T	Hoxd9.mouse_homeodomain_1	8	1	-	7.707931958869418	6.241604850384163	CCAATTAAA
chr20	4013961	4013962	chr20:4013962:T:C	rs2143234	T	C	C	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr20	4049839	4049840	chr20:4049840:G:A	rs11908553	G	A	a	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr20	4072372	4072373	chr20:4072373:C:G	rs6107402	C	G	C	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr20	4073110	4073111	chr20:4073111:T:C	rs16989183	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.027213970992095	6.693135371129603	CACATAAAA
chr20	4078707	4078708	chr20:4078708:A:G	rs73583670	A	G	A	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr20	4135788	4135789	chr20:4135789:A:G	rs1741285	A	G	A	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr20	4250858	4250859	chr20:4250859:T:C	rs34359049	T	C	T	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr20	4296979	4296980	chr20:4296980:A:G	rs7265560	A	G	G	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr20	4308418	4308419	chr20:4308419:C:G	rs8123338	C	G	G	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr20	4308423	4308424	chr20:4308424:T:C	rs8118540	T	C	T	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr20	4335689	4335690	chr20:4335690:A:G	rs6037820	A	G	G	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr20	4470434	4470435	chr20:4470435:C:T	rs76114410	C	T	C	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr20	4745468	4745469	chr20:4745469:C:T	rs6052819	C	T	C	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr20	4745469	4745470	chr20:4745470:A:G	rs2422942	A	G	G	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr20	4789250	4789251	chr20:4789251:C:G	rs2422991	C	G	C	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr20	5299218	5299219	chr20:5299219:A:G	rs140014838	A	G	A	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr20	5299256	5299257	chr20:5299257:T:C	rs6053271	T	C	T	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr20	5480390	5480391	chr20:5480391:C:A	rs6076841	C	A	c	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr20	5481495	5481496	chr20:5481496:T:G	rs6076842	T	G	T	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr20	5547903	5547904	chr20:5547904:T:A	chr20:5547904:T:A	T	A	T	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr20	5666195	5666196	chr20:5666196:A:G	rs4813768	A	G	A	Hoxd9.mouse_homeodomain_1	7	1	+	8.98901893988973	2.285192993297999	CCCATAAAA
chr20	5750351	5750352	chr20:5750352:C:T	rs1043838696	C	T	C	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr20	5750372	5750373	chr20:5750373:A:G	rs933920370	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.98901893988973	7.654940340027237	CCCATAAAA
chr20	5814311	5814312	chr20:5814312:A:G	rs237085	A	G	G	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr20	6052844	6052845	chr20:6052845:A:G	rs536993175	A	G	A	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr20	6141204	6141205	chr20:6141205:G:A	rs17226013	G	A	G	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr20	6492746	6492747	chr20:6492747:G:C	rs147281028	G	C	G	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr20	6709854	6709855	chr20:6709855:T:A	rs1015151	T	A	A	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr20	7356816	7356817	chr20:7356817:C:T	rs2423207	C	T	T	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr20	7369083	7369084	chr20:7369084:C:T	rs2423222	C	T	C	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr20	7412518	7412519	chr20:7412519:C:T	rs7343616	C	T	C	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr20	7484118	7484119	chr20:7484119:C:T	rs6086064	C	T	C	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr20	7623511	7623512	chr20:7623512:G:T	rs6038894	G	T	T	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr20	7956605	7956606	chr20:7956606:G:A	rs2423339	G	A	G	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr20	8157835	8157836	chr20:8157836:A:G	rs1033398	A	G	A	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr20	8176315	8176316	chr20:8176316:A:T	rs146452860	A	T	A	Hoxd9.mouse_homeodomain_1	8	1	+	7.9772278588234515	5.044714734057384	GCAATAAAA
chr20	8261249	8261250	chr20:8261250:A:G	rs750951353	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.287463081002919	6.953384481140425	CCAATAAAA
chr20	8322918	8322919	chr20:8322919:G:C	rs2143535	G	C	G	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr20	8400020	8400021	chr20:8400021:A:G	rs11904999	A	G	A	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr20	8458485	8458486	chr20:8458486:G:A	rs538010141	G	A	G	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr20	8532319	8532320	chr20:8532320:G:A	rs2064272	G	A	A	Hoxd9.mouse_homeodomain_1	3	1	+	7.075409217893736	8.409487817756228	CCCGTTAAA
chr20	8646202	8646203	chr20:8646203:G:A	rs7273982	G	A	G	Hoxd9.mouse_homeodomain_1	1	1	-	7.9772278588234515	6.662425944490444	GCAATAAAA
chr20	8646211	8646212	chr20:8646212:G:T	rs41275582	G	T	G	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr20	8860111	8860112	chr20:8860112:T:C	rs4813876	T	C	T	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr20	8874599	8874600	chr20:8874600:C:G	rs3912022	C	G	C	Hoxd9.mouse_homeodomain_1	8	1	-	7.522691831404475	7.45645131454733	CCCATAAAG
chr20	8876481	8876482	chr20:8876482:T:A	rs3848834	T	A	A	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr20	8885967	8885968	chr20:8885968:T:C	rs73605781	T	C	T	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr20	8938099	8938100	chr20:8938100:T:C	rs6118390	T	C	T	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr20	9100747	9100748	chr20:9100748:G:A	rs6056403	G	A	G	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr20	9229159	9229160	chr20:9229160:G:A	rs76569229	G	A	G	Hoxd9.mouse_homeodomain_1	8	1	+	7.522691831404475	8.98901893988973	CCCATAAAG
chr20	9401052	9401053	chr20:9401053:T:G	rs2076235	T	G	T	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr20	9417993	9417994	chr20:9417994:A:G	rs117098225	A	G	A	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr20	9501989	9501990	chr20:9501990:A:G	rs16995976	A	G	A	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr20	9615140	9615141	chr20:9615141:C:T	rs219857	C	T	C	Hoxd9.mouse_homeodomain_1	1	1	+	7.9772278588234515	6.662425944490444	GCAATAAAA
chr20	9723091	9723092	chr20:9723092:G:A	rs2423437	G	A	G	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr20	9986993	9986994	chr20:9986994:T:G	rs73067498	T	G	G	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr20	10185749	10185750	chr20:10185750:C:A	rs944873	C	A	C	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr20	10329147	10329148	chr20:10329148:G:A	rs146073234	G	A	G	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr20	10596557	10596558	chr20:10596558:G:A	rs111811179	G	A	G	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr20	10658894	10658895	chr20:10658895:G:A	rs2273061	G	A	A	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr20	10675346	10675347	chr20:10675347:T:C	rs77652538	T	C	T	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr20	10708788	10708789	chr20:10708789:C:T	rs910116	C	T	C	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr20	10710703	10710704	chr20:10710704:G:C	rs6032924	G	C	C	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr20	10983072	10983073	chr20:10983073:C:T	rs4142192	C	T	T	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr20	11155425	11155426	chr20:11155426:T:A	rs6104713	T	A	A	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr20	11157580	11157581	chr20:11157581:A:G	rs6108847	A	G	A	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr20	11207550	11207551	chr20:11207551:T:A	rs1013498	T	A	A	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr20	11245495	11245496	chr20:11245496:T:C	rs4813969	T	C	T	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr20	11619837	11619838	chr20:11619838:T:G	rs185532920	T	G	T	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr20	11806866	11806867	chr20:11806867:G:A	rs73084239	G	A	G	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr20	11809041	11809042	chr20:11809042:G:T	rs13036730	G	T	G	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr20	11881550	11881551	chr20:11881551:G:A	rs6033245	G	A	G	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr20	11881711	11881712	chr20:11881712:C:T	rs34861965	C	T	C	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr20	11892633	11892634	chr20:11892634:C:T	rs34983717	C	T	C	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr20	11936050	11936051	chr20:11936051:G:A	rs75375668	G	A	G	Hoxd9.mouse_homeodomain_1	1	1	-	7.212456609225008	5.897654694892	GCCATAAAG
chr20	11951606	11951607	chr20:11951607:A:C	rs6040993	A	C	c	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr20	12135727	12135728	chr20:12135728:A:T	rs4312556	A	T	A	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr20	12198596	12198597	chr20:12198597:C:T	rs910670	C	T	T	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr20	12502953	12502954	chr20:12502954:C:T	rs10460629	C	T	C	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr20	12681332	12681333	chr20:12681333:G:C	rs6078717	G	C	C	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr20	12918115	12918116	chr20:12918116:C:T	rs165557	C	T	C	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr20	13042053	13042054	chr20:13042054:A:G	rs6041800	A	G	g	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr20	13131742	13131743	chr20:13131743:T:G	rs73085888	T	G	T	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr20	13223864	13223865	chr20:13223865:A:G	rs2423720	A	G	A	Hoxd9.mouse_homeodomain_1	8	1	+	8.678783717710262	7.212456609225008	GCCATAAAA
chr20	13263439	13263440	chr20:13263440:A:T	rs6041975	A	T	A	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr20	13646364	13646365	chr20:13646365:C:T	rs6134948	C	T	C	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr20	13883774	13883775	chr20:13883775:A:G	rs6079204	A	G	A	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr20	14525995	14525996	chr20:14525996:G:A	rs2423797	G	A	A	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr20	14561733	14561734	chr20:14561734:T:G	rs980133875	T	G	T	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr20	14839201	14839202	chr20:14839202:A:G	rs376711	A	G	A	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr20	14897007	14897008	chr20:14897008:C:T	rs6135296	C	T	C	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr20	14897239	14897240	chr20:14897240:G:T	rs6135297	G	T	T	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr20	14921680	14921681	chr20:14921681:G:A	rs76069870	G	A	G	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr20	14986313	14986314	chr20:14986314:G:A	rs75877302	G	A	G	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr20	15039371	15039372	chr20:15039372:G:A	rs6034091	G	A	G	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr20	15251478	15251479	chr20:15251479:A:C	rs4814350	A	C	A	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr20	15297695	15297696	chr20:15297696:A:G	rs6043182	A	G	A	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr20	15297700	15297701	chr20:15297701:T:G	rs6034148	T	G	T	Hoxd9.mouse_homeodomain_1	5	1	-	7.889898683853121	5.992591131293127	ACCATAAAA
chr20	15347068	15347069	chr20:15347069:T:C	rs146458971	T	C	T	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr20	15518041	15518042	chr20:15518042:T:C	rs1237183	T	C	C	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr20	15710594	15710595	chr20:15710595:G:A	rs2423973	G	A	A	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr20	15976096	15976097	chr20:15976097:G:A	rs1339258	G	A	G	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr20	16019020	16019021	chr20:16019021:A:G	rs6135641	A	G	a	Hoxd9.mouse_homeodomain_1	3	1	+	8.287463081002919	6.953384481140425	CCAATAAAA
chr20	16203326	16203327	chr20:16203327:A:G	rs3904199	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.287463081002919	6.953384481140425	CCAATAAAA
chr20	16205732	16205733	chr20:16205733:G:A	rs4814454	G	A	A	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr20	16407889	16407890	chr20:16407890:T:C	rs77903865	T	C	T	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr20	16440972	16440973	chr20:16440973:G:A	rs17671977	G	A	G	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr20	16607788	16607789	chr20:16607789:A:G	rs116829252	A	G	A	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr20	16607814	16607815	chr20:16607815:C:T	rs945239	C	T	C	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr20	16607832	16607833	chr20:16607833:G:A	rs115032021	G	A	G	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr20	16612006	16612007	chr20:16612007:G:A	rs1105623	G	A	G	Hoxd9.mouse_homeodomain_1	0	1	+	8.678783717710262	7.889898683853121	GCCATAAAA
chr20	17101004	17101005	chr20:17101005:G:A	rs8182714	G	A	A	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr20	17129144	17129145	chr20:17129145:G:A	rs6131905	G	A	G	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr20	17503982	17503983	chr20:17503983:C:T	rs74181967	C	T	C	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr20	17791374	17791375	chr20:17791375:T:C	rs182562325	T	C	T	Hoxd9.mouse_homeodomain_1	6	1	-	8.099252595576761	1.3954266489850298	GCCATTAAA
chr20	17806432	17806433	chr20:17806433:C:T	rs2618621	C	T	C	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr20	17833499	17833500	chr20:17833500:A:T	rs544597	A	T	T	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr20	17833500	17833501	chr20:17833501:T:C	rs658674	T	C	t	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr20	17834025	17834026	chr20:17834026:C:A	rs811039	C	A	A	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr20	17967722	17967723	chr20:17967723:A:G	rs45462600	A	G	A	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr20	18027201	18027202	chr20:18027202:C:T	rs6045141	C	T	T	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr20	18138821	18138822	chr20:18138822:G:A	rs8122276	G	A	G	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr20	18227252	18227253	chr20:18227253:T:C	rs2424115	T	C	C	Hoxd9.mouse_homeodomain_1	8	1	-	7.716978748812629	6.250651640327374	GACATAAAA
chr20	18270203	18270204	chr20:18270204:C:T	rs6136338	C	T	C	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr20	18289348	18289349	chr20:18289349:C:A	rs61191003	C	A	C	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr20	18312205	18312206	chr20:18312206:T:C	rs59926713	T	C	T	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr20	18531027	18531028	chr20:18531028:T:C	rs3762202	T	C	C	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr20	18588557	18588558	chr20:18588558:C:T	rs73112608	C	T	C	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr20	18611725	18611726	chr20:18611726:C:G	rs6081243	C	G	G	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr20	18680926	18680927	chr20:18680927:T:C	rs11906583	T	C	T	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr20	18795390	18795391	chr20:18795391:G:A	rs80046336	G	A	G	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr20	18797546	18797547	chr20:18797547:C:G	rs2277864	C	G	C	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr20	19012161	19012162	chr20:19012162:C:G	rs2328344	C	G	C	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr20	19121052	19121053	chr20:19121053:G:A	rs1033814	G	A	G	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr20	19454636	19454637	chr20:19454637:C:G	rs1883693	C	G	G	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr20	19590013	19590014	chr20:19590014:T:C	rs62200269	T	C	T	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr20	19800049	19800050	chr20:19800050:A:C	rs62203168	A	C	A	Hoxd9.mouse_homeodomain_1	5	1	-	8.409487817756228	2.6148292216431743	CCCATTAAA
chr20	19858124	19858125	chr20:19858125:T:A	rs6035460	T	A	A	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr20	19974161	19974162	chr20:19974162:C:G	rs889988099	C	G	C	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr20	20003234	20003235	chr20:20003235:T:C	rs142235091	T	C	T	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr20	20010806	20010807	chr20:20010807:A:T	rs1289605358	A	T	A	Hoxd9.mouse_homeodomain_1	8	1	+	8.099252595576761	5.166739470810693	GCCATTAAA
chr20	20199427	20199428	chr20:20199428:A:G	rs76640682	A	G	A	Hoxd9.mouse_homeodomain_1	5	1	-	6.943160709270972	5.6253842788444794	CCCATTAAG
chr20	20307300	20307301	chr20:20307301:A:G	rs115367881	A	G	A	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr20	20343696	20343697	chr20:20343697:G:A	rs6046805	G	A	G	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr20	20360688	20360689	chr20:20360689:G:C	rs1410937	G	C	C	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr20	20579637	20579638	chr20:20579638:A:T	rs6082058	A	T	T	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr20	20821769	20821770	chr20:20821770:C:T	rs55911011	C	T	C	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr20	21117635	21117636	chr20:21117636:T:G	rs6047258	T	G	G	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr20	21117677	21117678	chr20:21117678:C:T	rs6047259	C	T	T	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr20	21185240	21185241	chr20:21185241:T:A	chr20:21185241:T:A	T	A	T	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr20	21470500	21470501	chr20:21470501:G:A	rs813393	G	A	G	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr20	22404409	22404410	chr20:22404410:T:A	rs145477541	T	A	T	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr20	22710281	22710282	chr20:22710282:T:A	rs77821288	T	A	T	Hoxd9.mouse_homeodomain_1	6	1	-	7.889898683853121	5.000482913822536	ACCATAAAA
chr20	22795442	22795443	chr20:22795443:G:C	rs4331580	G	C	C	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr20	22808390	22808391	chr20:22808391:G:A	rs1076749	G	A	g	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr20	22974587	22974588	chr20:22974588:A:G	rs1474943302	A	G	A	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr20	22977651	22977652	chr20:22977652:C:G	rs77762328	C	G	C	Hoxd9.mouse_homeodomain_1	1	1	+	8.409487817756228	1.9999545889738628	CCCATTAAA
chr20	23011623	23011624	chr20:23011624:C:T	rs874585	C	T	T	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr20	23076844	23076845	chr20:23076845:T:C	rs1998081	T	C	C	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr20	23152297	23152298	chr20:23152298:T:C	rs6036322	T	C	C	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr20	23258195	23258196	chr20:23258196:T:C	rs138675811	T	C	T	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr20	23329797	23329798	chr20:23329798:T:G	rs6083079	T	G	T	Hoxd9.mouse_homeodomain_1	0	1	-	7.889898683853121	8.98901893988973	ACCATAAAA
chr20	23332054	23332055	chr20:23332055:G:C	rs16985225	G	C	G	Hoxd9.mouse_homeodomain_1	1	1	-	8.287463081002919	1.877929852220554	CCAATAAAA
chr20	23360891	23360892	chr20:23360892:C:T	rs6083087	C	T	T	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr20	23383135	23383136	chr20:23383136:G:A	rs6137922	G	A	G	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr20	23452253	23452254	chr20:23452254:G:C	rs2249239	G	C	g	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr20	23581603	23581604	chr20:23581604:C:G	rs116785517	C	G	C	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr20	23724092	23724093	chr20:23724093:C:A	rs62208892	C	A	C	Hoxd9.mouse_homeodomain_1	0	1	-	7.9772278588234515	6.392915775693977	GCAATAAAA
chr20	23724100	23724101	chr20:23724101:C:A	rs62208893	C	A	A	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr20	23816237	23816238	chr20:23816238:G:A	rs4815230	G	A	g	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr20	23820871	23820872	chr20:23820872:G:A	rs6138122	G	A	G	Hoxd9.mouse_homeodomain_1	1	1	-	7.522691831404475	6.207889917071467	CCCATAAAG
chr20	24106982	24106983	chr20:24106983:C:T	rs7264988	C	T	C	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr20	24116707	24116708	chr20:24116708:G:A	rs34096340	G	A	G	Hoxd9.mouse_homeodomain_1	2	1	-	7.1462160923678635	0.6587756347442264	GCCATAAAC
chr20	24154487	24154488	chr20:24154488:C:T	rs6049446	C	T	T	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr20	24352461	24352462	chr20:24352462:C:G	rs11700142	C	G	C	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr20	24379564	24379565	chr20:24379565:G:A	rs6114680	G	A	G	Hoxd9.mouse_homeodomain_1	2	1	-	7.654940340027237	1.1674998824035994	CCCGTAAAA
chr20	24491954	24491955	chr20:24491955:A:G	rs73101307	A	G	A	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr20	24584009	24584010	chr20:24584010:G:A	rs62215296	G	A	G	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr20	24673271	24673272	chr20:24673272:T:C	rs6049850	T	C	C	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr20	24673272	24673273	chr20:24673273:G:A	rs6049851	G	A	G	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr20	24673290	24673291	chr20:24673291:G:T	rs66630249	G	T	G	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr20	24700084	24700085	chr20:24700085:A:G	rs73106763	A	G	A	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr20	24837740	24837741	chr20:24837741:A:C	chr20:24837741:A:C	A	C	A	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr20	24842295	24842296	chr20:24842296:T:C	rs73339206	T	C	C	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr20	24938508	24938509	chr20:24938509:T:C	rs6114942	T	C	C	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr20	24938519	24938520	chr20:24938520:C:A	rs60310205	C	A	C	Hoxd9.mouse_homeodomain_1	0	1	-	7.1462160923678635	5.561904009238388	GCCATAAAC
chr20	24960184	24960185	chr20:24960185:C:G	rs1883831	C	G	G	Hoxd9.mouse_homeodomain_1	3	1	-	7.654940340027237	2.4135108356862487	CCCGTAAAA
chr20	24973357	24973358	chr20:24973358:C:T	rs7360205	C	T	C	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr20	25064598	25064599	chr20:25064599:T:C	rs141923035	T	C	T	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr20	25234399	25234400	chr20:25234400:T:G	rs11087506	T	G	T	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr20	25274914	25274915	chr20:25274915:C:G	rs6050515	C	G	C	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr20	25382940	25382941	chr20:25382941:G:C	rs192723887	G	C	g	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr20	25382954	25382955	chr20:25382955:A:G	rs6107033	A	G	g	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr20	25407274	25407275	chr20:25407275:C:T	rs2500414	C	T	C	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr20	25467259	25467260	chr20:25467260:A:G	rs404394	A	G	G	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr20	25490932	25490933	chr20:25490933:C:A	rs74385673	C	A	C	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr20	25540709	25540710	chr20:25540710:A:T	rs6138600	A	T	A	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr20	25567130	25567131	chr20:25567131:A:G	rs6132845	A	G	A	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr20	25668418	25668419	chr20:25668419:T:G	rs6515674	T	G	G	Hoxd9.mouse_homeodomain_1	0	1	-	7.889898683853121	8.98901893988973	ACCATAAAA
chr20	25902612	25902613	chr20:25902613:T:C	rs4121094	T	C	.	Hoxd9.mouse_homeodomain_1	6	1	-	7.9772278588234515	1.2734019122317202	GCAATAAAA
chr20	25979370	25979371	chr20:25979371:T:C	rs4813596	T	C	.	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr20	25997212	25997213	chr20:25997213:A:G	rs6107126	A	G	.	Hoxd9.mouse_homeodomain_1	4	1	-	7.889898683853121	5.234852038990543	ACCATAAAA
chr20	26292225	26292226	chr20:26292226:C:T	rs2225983	C	T	.	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr20	26366361	26366362	chr20:26366362:T:A	rs1457625530	T	A	.	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr20	26570951	26570952	chr20:26570952:C:T	rs1267852374	C	T	.	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr20	27743313	27743314	chr20:27743314:T:C	rs1361985073	T	C	.	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr20	28531505	28531506	chr20:28531506:G:A	rs1418483108	G	A	.	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr20	28535796	28535797	chr20:28535797:T:A	rs1156345754	T	A	.	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr20	28558241	28558242	chr20:28558242:G:A	rs1408529075	G	A	.	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr20	28612383	28612384	chr20:28612384:G:T	rs1440690209	G	T	.	Hoxd9.mouse_homeodomain_1	1	1	-	7.241935125048919	6.2801301561512854	CCCATACAA
chr20	28729382	28729383	chr20:28729383:T:C	rs1462620128	T	C	.	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr20	28785401	28785402	chr20:28785402:A:T	rs1181954527	A	T	.	Hoxd9.mouse_homeodomain_1	4	1	-	8.027213970992095	1.1853955236614904	CACATAAAA
chr20	28804666	28804667	chr20:28804667:A:C	rs1344610583	A	C	.	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr20	28830899	28830900	chr20:28830900:A:C	rs1213853242	A	C	.	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr20	28831140	28831141	chr20:28831141:A:C	rs879127905	A	C	.	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr20	28871785	28871786	chr20:28871786:C:G	rs1317852784	C	G	.	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr20	28871814	28871815	chr20:28871815:T:C	rs1313033283	T	C	.	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr20	28954011	28954012	chr20:28954012:C:T	rs1407152764	C	T	.	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr20	29076347	29076348	chr20:29076348:C:G	rs1197683812	C	G	.	Hoxd9.mouse_homeodomain_1	0	1	-	8.678783717710262	8.98901893988973	GCCATAAAA
chr20	29122957	29122958	chr20:29122958:T:C	rs1384928914	T	C	.	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr20	29187915	29187916	chr20:29187916:C:A	rs1186771637	C	A	.	Hoxd9.mouse_homeodomain_1	2	1	+	8.027213970992095	7.325658112105286	CACATAAAA
chr20	29206247	29206248	chr20:29206248:G:T	rs1476881132	G	T	.	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr20	29263167	29263168	chr20:29263168:G:A	rs1280634693	G	A	.	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr20	29263188	29263189	chr20:29263189:G:A	rs1310484186	G	A	.	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr20	29263700	29263701	chr20:29263701:A:C	rs1175021371	A	C	.	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr20	29284171	29284172	chr20:29284172:C:T	rs1437651226	C	T	.	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr20	29316462	29316463	chr20:29316463:G:T	rs1169813297	G	T	.	Hoxd9.mouse_homeodomain_1	2	1	-	8.678783717710262	7.9772278588234515	GCCATAAAA
chr20	29329576	29329577	chr20:29329577:G:A	rs1366891439	G	A	.	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr20	29443941	29443942	chr20:29443942:T:C	rs1356349735	T	C	.	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr20	29495618	29495619	chr20:29495619:G:A	rs35655085	G	A	.	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr20	29885883	29885884	chr20:29885884:C:A	rs1433644288	C	A	.	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr20	29942159	29942160	chr20:29942160:A:T	rs1462913730	A	T	.	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr20	29983632	29983633	chr20:29983633:T:C	rs1372367533	T	C	.	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr20	29983645	29983646	chr20:29983646:C:T	rs1411660537	C	T	.	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr20	30007583	30007584	chr20:30007584:A:C	rs1336786369	A	C	.	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr20	30151006	30151007	chr20:30151007:A:C	rs36136620	A	C	.	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr20	30289466	30289467	chr20:30289467:C:T	rs139996114	C	T	.	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr20	30289486	30289487	chr20:30289487:G:T	rs4635593	G	T	.	Hoxd9.mouse_homeodomain_1	8	1	+	6.943160709270972	5.47697469299016	CCCATTAAG
chr20	30289500	30289501	chr20:30289501:C:G	rs150780629	C	G	.	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr20	30637220	30637221	chr20:30637221:C:T	rs1209249326	C	T	.	Hoxd9.mouse_homeodomain_1	6	1	+	7.241935125048919	6.099603169859144	CCCATACAA
chr20	30649974	30649975	chr20:30649975:A:G	rs1408390749	A	G	.	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr20	30889936	30889937	chr20:30889937:C:A	rs2311876	C	A	.	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr20	30905892	30905893	chr20:30905893:G:A	rs1475016281	G	A	.	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr20	30913260	30913261	chr20:30913261:C:A	rs1284248831	C	A	.	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr20	31588862	31588863	chr20:31588863:G:A	rs73613709	G	A	G	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr20	32204494	32204495	chr20:32204495:T:G	rs74963132	T	G	T	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr20	32204502	32204503	chr20:32204503:C:A	rs6058547	C	A	C	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr20	32396969	32396970	chr20:32396970:A:C	rs2424886	A	C	A	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr20	32460578	32460579	chr20:32460579:G:A	rs1555133	G	A	G	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr20	32581802	32581803	chr20:32581803:G:T	rs116974108	G	T	G	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr20	32755736	32755737	chr20:32755737:A:C	rs2424899	A	C	A	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr20	32885373	32885374	chr20:32885374:A:G	rs4911271	A	G	A	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr20	32885375	32885376	chr20:32885376:G:T	rs4911272	G	T	G	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr20	33169395	33169396	chr20:33169396:T:C	rs76950763	T	C	T	Hoxd9.mouse_homeodomain_1	5	1	-	7.522691831404475	1.1485021131579192	CCCATAAAG
chr20	33169399	33169400	chr20:33169400:G:A	rs180727332	G	A	G	Hoxd9.mouse_homeodomain_1	1	1	-	7.522691831404475	6.207889917071467	CCCATAAAG
chr20	33258204	33258205	chr20:33258205:A:G	rs11697797	A	G	A	Hoxd9.mouse_homeodomain_1	5	1	+	8.027213970992095	1.6530242527455408	CACATAAAA
chr20	33489945	33489946	chr20:33489946:T:G	chr20:33489946:T:G	T	G	T	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr20	33489975	33489976	chr20:33489976:T:C	rs762306223	T	C	T	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr20	33647627	33647628	chr20:33647628:G:C	rs957188792	G	C	G	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr20	34164686	34164687	chr20:34164687:G:T	rs6120546	G	T	G	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr20	34252687	34252688	chr20:34252688:A:G	rs8125380	A	G	A	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr20	34278037	34278038	chr20:34278038:T:G	rs819176	T	G	T	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr20	34511987	34511988	chr20:34511988:A:G	rs6120668	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.287463081002919	6.953384481140425	CCAATAAAA
chr20	34709365	34709366	chr20:34709366:A:C	rs765845532	A	C	A	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr20	35271871	35271872	chr20:35271872:C:T	rs11696548	C	T	T	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr20	35278949	35278950	chr20:35278950:G:C	rs7004	G	C	G	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr20	36460828	36460829	chr20:36460829:G:A	rs140432913	G	A	G	Hoxd9.mouse_homeodomain_1	1	1	-	7.654940340027237	6.34013842569423	CCCGTAAAA
chr20	36465473	36465474	chr20:36465474:G:T	rs6091247	G	T	A	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr20	36606376	36606377	chr20:36606377:C:T	rs118081466	C	T	C	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr20	37276919	37276920	chr20:37276920:T:G	rs979608519	T	G	T	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr20	37597363	37597364	chr20:37597364:C:T	rs4810915	C	T	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.34470511784777	8.678783717710262	GCCGTAAAA
chr20	37948206	37948207	chr20:37948207:T:C	rs6022011	T	C	C	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr20	37948207	37948208	chr20:37948208:G:A	rs35562069	G	A	G	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr20	38004512	38004513	chr20:38004513:G:C	rs139488288	G	C	G	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr20	38085562	38085563	chr20:38085563:C:T	rs149881623	C	T	C	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr20	38125471	38125472	chr20:38125472:C:T	rs35930097	C	T	T	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr20	38428853	38428854	chr20:38428854:C:G	rs756065	C	G	C	Hoxd9.mouse_homeodomain_1	0	1	+	7.241935125048919	6.931699902869452	CCCATACAA
chr20	39150925	39150926	chr20:39150926:C:T	rs2235769	C	T	C	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr20	39237259	39237260	chr20:39237260:C:T	rs59180307	C	T	C	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr20	39253361	39253362	chr20:39253362:C:A	rs73114553	C	A	C	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr20	39547858	39547859	chr20:39547859:T:C	rs8114090	T	C	T	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr20	39674819	39674820	chr20:39674820:T:G	rs1655349	T	G	T	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr20	39835845	39835846	chr20:39835846:C:A	rs79664720	C	A	C	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr20	39962356	39962357	chr20:39962357:G:A	rs34587927	G	A	G	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr20	40160688	40160689	chr20:40160689:T:C	rs6028920	T	C	C	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr20	40397181	40397182	chr20:40397182:C:G	rs74989472	C	G	C	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr20	40610703	40610704	chr20:40610704:T:A	rs2865508	T	A	T	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr20	40711366	40711367	chr20:40711367:C:T	rs6093382	C	T	C	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr20	40755798	40755799	chr20:40755799:A:G	rs73300150	A	G	a	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr20	40865174	40865175	chr20:40865175:G:T	rs76918293	G	T	G	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr20	40865207	40865208	chr20:40865208:C:T	rs1109393	C	T	C	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr20	40994089	40994090	chr20:40994090:A:C	rs6029507	A	C	A	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr20	41089826	41089827	chr20:41089827:C:A	rs115746652	C	A	C	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr20	41089840	41089841	chr20:41089841:T:C	rs73259882	T	C	T	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr20	41229036	41229037	chr20:41229037:T:A	rs75068753	T	A	T	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr20	41249228	41249229	chr20:41249229:T:C	rs4810311	T	C	T	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr20	41287796	41287797	chr20:41287797:T:C	rs6129801	T	C	C	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr20	41320636	41320637	chr20:41320637:G:A	rs6102352	G	A	A	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr20	41321313	41321314	chr20:41321314:G:T	rs6029626	G	T	G	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr20	41412838	41412839	chr20:41412839:G:A	rs742434	G	A	G	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr20	41433142	41433143	chr20:41433143:T:G	rs34940339	T	G	T	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr20	41533925	41533926	chr20:41533926:G:A	rs915208273	G	A	G	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr20	41609548	41609549	chr20:41609549:T:C	rs6072445	T	C	T	Hoxd9.mouse_homeodomain_1	4	1	+	7.1462160923678635	4.491169447505284	GCCATAAAC
chr20	41732360	41732361	chr20:41732361:A:G	rs73127322	A	G	G	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr20	42042313	42042314	chr20:42042314:C:A	rs2866940	C	A	A	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr20	42090512	42090513	chr20:42090513:A:C	rs35258493	A	C	C	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr20	42277185	42277186	chr20:42277186:C:T	rs62208714	C	T	C	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr20	42434027	42434028	chr20:42434028:A:C	rs10854225	A	C	A	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr20	42572803	42572804	chr20:42572804:A:C	rs62203789	A	C	A	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr20	43124602	43124603	chr20:43124603:A:G	rs6016963	A	G	A	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr20	43424296	43424297	chr20:43424297:C:T	rs6017064	C	T	C	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr20	43489840	43489841	chr20:43489841:G:T	rs6073109	G	T	T	Hoxd9.mouse_homeodomain_1	1	1	-	7.707931958869418	6.746126989971783	CCAATTAAA
chr20	43512947	43512948	chr20:43512948:G:A	rs80129293	G	A	G	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr20	43692631	43692632	chr20:43692632:G:A	rs181578500	G	A	G	Hoxd9.mouse_homeodomain_1	0	1	+	7.9772278588234515	7.188342824966311	GCAATAAAA
chr20	43925161	43925162	chr20:43925162:A:G	rs4812765	A	G	G	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr20	43964381	43964382	chr20:43964382:C:T	rs138763719	C	T	C	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr20	43964390	43964391	chr20:43964391:C:T	chr20:43964391:C:T	C	T	C	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr20	44018243	44018244	chr20:44018244:T:C	rs80309232	T	C	T	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr20	44018551	44018552	chr20:44018552:A:C	rs79566761	A	C	A	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr20	44036645	44036646	chr20:44036646:T:G	rs112600198	T	G	T	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr20	44036658	44036659	chr20:44036659:G:A	rs80348390	G	A	G	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr20	44081293	44081294	chr20:44081294:A:G	rs1883681	A	G	G	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr20	44124302	44124303	chr20:44124303:C:T	rs7265031	C	T	C	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr20	44133241	44133242	chr20:44133242:C:T	rs6073347	C	T	c	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr20	44217421	44217422	chr20:44217422:T:G	rs1011923367	T	G	T	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr20	44217424	44217425	chr20:44217425:C:T	rs45472797	C	T	C	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr20	44218780	44218781	chr20:44218781:C:G	rs4810413	C	G	C	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr20	44218791	44218792	chr20:44218792:A:T	rs4812800	A	T	T	Hoxd9.mouse_homeodomain_1	7	1	+	7.707931958869418	5.960848144028606	CCAATTAAA
chr20	44218799	44218800	chr20:44218800:G:C	rs4812801	G	C	C	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr20	44287840	44287841	chr20:44287841:T:C	rs2868089	T	C	T	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr20	44442708	44442709	chr20:44442709:C:T	rs58438406	C	T	C	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr20	44442813	44442814	chr20:44442814:G:A	rs142940854	G	A	G	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr20	44566199	44566200	chr20:44566200:T:C	rs75295108	T	C	T	Hoxd9.mouse_homeodomain_1	5	1	-	8.287463081002919	1.9132733627563638	CCAATAAAA
chr20	44736862	44736863	chr20:44736863:C:T	rs6073534	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	+	8.287463081002919	6.392915775693977	CCAATAAAA
chr20	44736868	44736869	chr20:44736869:A:C	rs532289731	A	C	A	Hoxd9.mouse_homeodomain_1	6	1	+	8.287463081002919	6.540379266162109	CCAATAAAA
chr20	44941403	44941404	chr20:44941404:A:G	rs16989514	A	G	A	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr20	45175329	45175330	chr20:45175330:C:T	rs56168207	C	T	T	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr20	45413367	45413368	chr20:45413368:C:T	rs2038038	C	T	C	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr20	46000650	46000651	chr20:46000651:T:A	rs6094237	T	A	A	Hoxd9.mouse_homeodomain_1	8	1	-	8.409487817756228	5.47697469299016	CCCATTAAA
chr20	46060090	46060091	chr20:46060091:G:A	rs2664528	G	A	A	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr20	46127249	46127250	chr20:46127250:G:A	rs11569333	G	A	G	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr20	46268206	46268207	chr20:46268207:G:A	rs2425819	G	A	G	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr20	46756189	46756190	chr20:46756190:A:G	rs6124861	A	G	A	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr20	46810735	46810736	chr20:46810736:C:A	rs6094487	C	A	C	Hoxd9.mouse_homeodomain_1	0	1	-	7.9772278588234515	6.392915775693977	GCAATAAAA
chr20	46866043	46866044	chr20:46866044:G:T	rs62201177	G	T	G	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr20	46930737	46930738	chr20:46930738:T:C	rs115993851	T	C	T	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr20	46987240	46987241	chr20:46987241:G:A	rs78083971	G	A	G	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr20	47009012	47009013	chr20:47009013:G:A	rs113389335	G	A	G	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr20	47111859	47111860	chr20:47111860:A:G	rs6018285	A	G	A	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr20	47267054	47267055	chr20:47267055:C:T	rs713164	C	T	T	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr20	47267084	47267085	chr20:47267085:G:A	rs7261717	G	A	G	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr20	47392646	47392647	chr20:47392647:G:T	rs113258056	G	T	G	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr20	47569358	47569359	chr20:47569359:C:T	rs6018556	C	T	-	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr20	47727040	47727041	chr20:47727041:C:T	rs36046644	C	T	C	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr20	47806522	47806523	chr20:47806523:G:A	rs6094862	G	A	G	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr20	47806679	47806680	chr20:47806680:T:C	rs6125123	T	C	T	Hoxd9.mouse_homeodomain_1	6	1	-	8.678783717710262	1.9749577711185315	GCCATAAAA
chr20	47806697	47806698	chr20:47806698:G:A	rs6125124	G	A	G	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr20	47806705	47806706	chr20:47806706:G:A	rs6125125	G	A	G	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr20	47810058	47810059	chr20:47810059:C:T	rs16992867	C	T	C	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr20	47909265	47909266	chr20:47909266:A:G	rs916351	A	G	G	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr20	47951674	47951675	chr20:47951675:A:G	rs73913248	A	G	A	Hoxd9.mouse_homeodomain_1	8	1	+	8.287463081002919	6.821135972517665	CCAATAAAA
chr20	48041171	48041172	chr20:48041172:A:G	rs748995	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	7.212456609225008	5.878378009362515	GCCATAAAG
chr20	48064842	48064843	chr20:48064843:C:G	rs2869343	C	G	c	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr20	48149830	48149831	chr20:48149831:A:G	rs11700186	A	G	A	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr20	48197524	48197525	chr20:48197525:G:A	rs6066667	G	A	G	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr20	48220178	48220179	chr20:48220179:C:T	rs141722749	C	T	C	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr20	48308304	48308305	chr20:48308305:T:G	rs2426063	T	G	G	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr20	48521631	48521632	chr20:48521632:T:A	rs4810806	T	A	A	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr20	48595807	48595808	chr20:48595808:T:C	rs6095196	T	C	T	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr20	48658748	48658749	chr20:48658749:G:A	rs55973971	G	A	g	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr20	48829233	48829234	chr20:48829234:C:A	rs185111187	C	A	C	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr20	48914616	48914617	chr20:48914617:G:C	rs6012557	G	C	G	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr20	49187448	49187449	chr20:49187449:T:G	chr20:49187449:T:G	T	G	T	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr20	49248834	49248835	chr20:49248835:G:A	rs238208	G	A	A	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr20	49642496	49642497	chr20:49642497:A:G	rs2235855	A	G	G	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr20	49736135	49736136	chr20:49736136:T:G	rs7344757	T	G	T	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr20	49794891	49794892	chr20:49794892:A:T	rs11086294	A	T	T	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr20	49986786	49986787	chr20:49986787:G:A	rs6020177	G	A	.	Hoxd9.mouse_homeodomain_1	1	1	-	8.409487817756228	7.094685903423221	CCCATTAAA
chr20	50049159	50049160	chr20:50049160:G:A	rs6122865	G	A	g	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr20	50070877	50070878	chr20:50070878:A:T	rs9712448	A	T	T	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr20	50223833	50223834	chr20:50223834:A:T	rs6125946	A	T	T	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr20	50324089	50324090	chr20:50324090:A:T	rs6020446	A	T	T	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr20	50358009	50358010	chr20:50358010:T:C	rs913681	T	C	N	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr20	50412149	50412150	chr20:50412150:G:A	rs384031	G	A	A	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr20	50434735	50434736	chr20:50434736:C:G	rs6067445	C	G	C	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr20	50450962	50450963	chr20:50450963:C:T	rs6020518	C	T	-	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr20	50454106	50454107	chr20:50454107:G:A	rs75994450	G	A	A	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr20	50460885	50460886	chr20:50460886:C:G	rs13042830	C	G	C	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr20	50460913	50460914	chr20:50460914:T:C	rs903744027	T	C	T	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr20	50483423	50483424	chr20:50483424:C:A	rs73131939	C	A	C	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr20	50511702	50511703	chr20:50511703:G:A	rs6020572	G	A	A	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr20	50578069	50578070	chr20:50578070:A:G	rs6020611	A	G	A	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr20	50794601	50794602	chr20:50794602:G:A	chr20:50794602:G:A	G	A	G	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr20	50805154	50805155	chr20:50805155:G:A	rs76675039	G	A	G	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr20	50825102	50825103	chr20:50825103:A:G	rs11905232	A	G	A	Hoxd9.mouse_homeodomain_1	8	1	+	8.98901893988973	7.522691831404475	CCCATAAAA
chr20	50929653	50929654	chr20:50929654:A:G	rs1244567279	A	G	A	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr20	50987686	50987687	chr20:50987687:A:G	rs6122990	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	7.889898683853121	6.555820083990628	ACCATAAAA
chr20	51351642	51351643	chr20:51351643:G:C	rs150844951	G	C	G	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr20	51382584	51382585	chr20:51382585:A:G	rs6063647	A	G	a	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr20	51481684	51481685	chr20:51481685:C:T	rs6126238	C	T	C	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr20	51526091	51526092	chr20:51526092:C:T	rs570478076	C	T	A	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr20	51526092	51526093	chr20:51526093:G:A	rs115153238	G	A	G	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr20	51601080	51601081	chr20:51601081:A:G	rs1048712	A	G	T	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr20	51631067	51631068	chr20:51631068:C:T	rs73267750	C	T	c	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr20	51648539	51648540	chr20:51648540:A:T	rs2426340	A	T	T	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr20	51665407	51665408	chr20:51665408:C:T	rs885780	C	T	T	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr20	51705744	51705745	chr20:51705745:C:A	rs6067905	C	A	C	Hoxd9.mouse_homeodomain_1	2	1	+	8.409487817756228	7.707931958869418	CCCATTAAA
chr20	51769949	51769950	chr20:51769950:G:C	rs6091366	G	C	G	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr20	51810320	51810321	chr20:51810321:A:G	rs6021460	A	G	G	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr20	51902779	51902780	chr20:51902780:A:T	rs6126388	A	T	A	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr20	51902787	51902788	chr20:51902788:A:G	rs6021544	A	G	A	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr20	51910799	51910800	chr20:51910800:C:G	rs59065399	C	G	C	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr20	51934478	51934479	chr20:51934479:T:C	rs2152760	T	C	C	Hoxd9.mouse_homeodomain_1	8	1	-	7.241935125048919	5.775608016563663	CCCATACAA
chr20	52082765	52082766	chr20:52082766:C:T	rs7268277	C	T	T	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr20	52105616	52105617	chr20:52105617:T:C	rs193229160	T	C	T	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr20	52194364	52194365	chr20:52194365:C:T	rs6096807	C	T	c	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr20	52275523	52275524	chr20:52275524:C:T	chr20:52275524:C:T	C	T	C	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr20	52312373	52312374	chr20:52312374:T:A	rs8124508	T	A	T	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr20	52401709	52401710	chr20:52401710:T:C	rs6021906	T	C	C	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr20	52616872	52616873	chr20:52616873:C:T	rs17805961	C	T	C	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr20	52621888	52621889	chr20:52621889:A:G	rs6063849	A	G	A	Hoxd9.mouse_homeodomain_1	4	1	-	7.522691831404475	4.867645186541897	CCCATAAAG
chr20	52621910	52621911	chr20:52621911:C:T	rs6068283	C	T	T	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr20	52880467	52880468	chr20:52880468:T:C	rs1923110	T	C	C	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr20	53024046	53024047	chr20:53024047:C:T	rs6097193	C	T	T	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr20	53126608	53126609	chr20:53126609:G:A	rs2904296	G	A	G	Hoxd9.mouse_homeodomain_1	0	1	+	8.099252595576761	7.3103675617196195	GCCATTAAA
chr20	53171296	53171297	chr20:53171297:A:G	rs73911214	A	G	A	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr20	53223777	53223778	chr20:53223778:A:G	rs6022342	A	G	A	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr20	53370771	53370772	chr20:53370772:A:G	rs6091666	A	G	A	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr20	53570444	53570445	chr20:53570445:G:A	rs2766673	G	A	G	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr20	53571072	53571073	chr20:53571073:G:C	rs8184575	G	C	G	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr20	53580839	53580840	chr20:53580840:G:A	rs190337173	G	A	G	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr20	53736650	53736651	chr20:53736651:G:A	rs16998352	G	A	G	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr20	53857862	53857863	chr20:53857863:A:G	rs1010989813	A	G	A	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr20	54068384	54068385	chr20:54068385:C:A	rs6068765	C	A	C	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr20	54070692	54070693	chr20:54070693:A:G	rs6127084	A	G	A	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr20	54169679	54169680	chr20:54169680:G:A	rs2296241	G	A	A	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr20	54171774	54171775	chr20:54171775:T:C	rs2259735	T	C	C	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr20	54185246	54185247	chr20:54185247:C:T	rs77954161	C	T	C	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr20	54308581	54308582	chr20:54308582:G:A	rs1293137	G	A	A	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr20	54558522	54558523	chr20:54558523:A:G	rs6014053	A	G	A	Hoxd9.mouse_homeodomain_1	6	1	+	8.027213970992095	1.3233880244003648	CACATAAAA
chr20	55058113	55058114	chr20:55058114:T:G	rs140342138	T	G	T	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr20	55173849	55173850	chr20:55173850:C:T	rs12329514	C	T	C	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr20	55253852	55253853	chr20:55253853:G:A	rs139865396	G	A	G	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr20	55693599	55693600	chr20:55693600:C:A	rs559236100	C	A	C	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr20	56019677	56019678	chr20:56019678:T:G	rs56086997	T	G	T	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr20	56022134	56022135	chr20:56022135:C:A	rs2208068	C	A	A	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr20	56194558	56194559	chr20:56194559:T:A	rs77915688	T	A	T	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr20	56205416	56205417	chr20:56205417:A:C	rs75249040	A	C	A	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr20	56268968	56268969	chr20:56268969:A:G	rs1326022	A	G	A	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr20	56352878	56352879	chr20:56352879:G:A	rs117397651	G	A	G	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr20	56451195	56451196	chr20:56451196:G:A	rs75193011	G	A	G	Hoxd9.mouse_homeodomain_1	1	1	-	8.98901893988973	7.674217025556723	CCCATAAAA
chr20	56634016	56634017	chr20:56634017:C:T	rs62208556	C	T	C	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr20	56818987	56818988	chr20:56818988:C:T	rs6014832	C	T	T	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr20	56898144	56898145	chr20:56898145:T:C	rs6092381	T	C	T	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr20	56933484	56933485	chr20:56933485:T:C	rs62208758	T	C	T	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr20	56933515	56933516	chr20:56933516:G:A	rs117757510	G	A	G	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr20	57070430	57070431	chr20:57070431:C:T	rs1966204	C	T	C	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr20	57168393	57168394	chr20:57168394:G:A	rs11086596	G	A	G	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr20	57168432	57168433	chr20:57168433:C:A	rs138625707	C	A	C	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr20	57258402	57258403	chr20:57258403:G:C	rs769079879	G	C	G	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr20	57361825	57361826	chr20:57361826:A:G	rs2426708	A	G	A	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr20	57380032	57380033	chr20:57380033:C:T	rs193014	C	T	C	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr20	57424213	57424214	chr20:57424214:C:T	rs4811847	C	T	C	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr20	57466917	57466918	chr20:57466918:T:C	rs6099636	T	C	C	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr20	57589124	57589125	chr20:57589125:T:A	rs6128090	T	A	t	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr20	57654013	57654014	chr20:57654014:A:C	rs138353982	A	C	A	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr20	57655080	57655081	chr20:57655081:G:A	rs6070205	G	A	A	Hoxd9.mouse_homeodomain_1	1	1	-	7.075409217893736	5.760607303560727	CCCGTTAAA
chr20	57813970	57813971	chr20:57813971:G:A	rs962814	G	A	A	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr20	57878584	57878585	chr20:57878585:G:A	rs146203243	G	A	G	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr20	58016547	58016548	chr20:58016548:T:C	rs16981575	T	C	T	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr20	58016548	58016549	chr20:58016549:A:T	rs6099884	A	T	A	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr20	58082055	58082056	chr20:58082056:T:C	rs113581335	T	C	t	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr20	58169371	58169372	chr20:58169372:A:G	rs6026098	A	G	G	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr20	58202382	58202383	chr20:58202383:C:T	rs6128287	C	T	T	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr20	58229832	58229833	chr20:58229833:G:T	rs550222	G	T	T	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr20	58242282	58242283	chr20:58242283:G:A	rs62205862	G	A	G	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr20	58547015	58547016	chr20:58547016:T:G	rs372741379	T	G	T	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr20	58556169	58556170	chr20:58556170:A:G	rs1076762	A	G	G	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr20	58556177	58556178	chr20:58556178:G:C	rs1076763	G	C	G	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr20	58564596	58564597	chr20:58564597:G:A	rs118155993	G	A	G	Hoxd9.mouse_homeodomain_1	2	1	-	8.027213970992095	1.5397735133684596	CACATAAAA
chr20	58580278	58580279	chr20:58580279:A:G	rs28678697	A	G	G	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr20	58595339	58595340	chr20:58595340:C:T	rs8117975	C	T	C	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr20	58640329	58640330	chr20:58640330:T:C	rs218465	T	C	C	Hoxd9.mouse_homeodomain_1	3	1	-	8.98901893988973	7.654940340027237	CCCATAAAA
chr20	58652831	58652832	chr20:58652832:G:A	rs182663074	G	A	G	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr20	58665392	58665393	chr20:58665393:A:T	rs6026436	A	T	A	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr20	58740629	58740630	chr20:58740630:G:A	rs6026484	G	A	G	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr20	58744071	58744072	chr20:58744072:G:A	rs150640439	G	A	g	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr20	58766849	58766850	chr20:58766850:A:G	rs2865713	A	G	G	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr20	58851547	58851548	chr20:58851548:C:A	rs75648958	C	A	C	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr20	59146094	59146095	chr20:59146095:C:T	rs986830916	C	T	C	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr20	59516214	59516215	chr20:59516215:C:T	rs12165253	C	T	C	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr20	59730147	59730148	chr20:59730148:C:T	rs6027062	C	T	T	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr20	59866556	59866557	chr20:59866557:C:T	rs58905758	C	T	C	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr20	60031042	60031043	chr20:60031043:T:C	rs1812756	T	C	T	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr20	60078281	60078282	chr20:60078282:A:G	rs11086694	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	7.9772278588234515	6.643149258960959	GCAATAAAA
chr20	60103011	60103012	chr20:60103012:T:A	rs6092872	T	A	T	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr20	60138762	60138763	chr20:60138763:A:T	rs41307175	A	T	A	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr20	60172530	60172531	chr20:60172531:T:C	rs6027379	T	C	C	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr20	60240961	60240962	chr20:60240962:T:G	rs6027435	T	G	T	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr20	60715228	60715229	chr20:60715229:A:T	rs1201970	A	T	T	Hoxd9.mouse_homeodomain_1	7	1	+	8.287463081002919	6.540379266162109	CCAATAAAA
chr20	60760365	60760366	chr20:60760366:T:G	rs4812204	T	G	T	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr20	60778523	60778524	chr20:60778524:T:C	rs1781347	T	C	C	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr20	60942261	60942262	chr20:60942262:T:G	rs237644	T	G	T	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr20	61140918	61140919	chr20:61140919:T:G	rs13038268	T	G	T	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr20	61209352	61209353	chr20:61209353:G:C	rs11086729	G	C	G	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr20	61322914	61322915	chr20:61322915:T:G	rs2427081	T	G	G	Hoxd9.mouse_homeodomain_1	5	1	-	7.716978748812629	5.819671196252634	GACATAAAA
chr20	61322922	61322923	chr20:61322923:A:G	rs2427082	A	G	G	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr20	61354990	61354991	chr20:61354991:C:T	rs28415571	C	T	T	Hoxd9.mouse_homeodomain_1	1	1	+	7.522691831404475	6.207889917071467	CCCATAAAG
chr20	61366832	61366833	chr20:61366833:C:T	rs112475874	C	T	C	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr20	61399479	61399480	chr20:61399480:C:A	rs57984446	C	A	C	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr20	61536686	61536687	chr20:61536687:A:G	rs6142655	A	G	A	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr20	61541727	61541728	chr20:61541728:C:T	rs6061279	C	T	T	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr20	61595901	61595902	chr20:61595902:A:C	rs2254184	A	C	C	Hoxd9.mouse_homeodomain_1	8	1	+	8.98901893988973	7.45645131454733	CCCATAAAA
chr20	61632463	61632464	chr20:61632464:A:G	rs2427205	A	G	G	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr20	61632466	61632467	chr20:61632467:G:A	rs2427206	G	A	A	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr20	62275053	62275054	chr20:62275054:A:T	rs6142732	A	T	a	Hoxd9.mouse_homeodomain_1	3	1	+	7.241935125048919	5.238453988240274	CCCATACAA
chr20	62387886	62387887	chr20:62387887:T:C	rs1043008	T	C	T	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr20	62557229	62557230	chr20:62557230:T:C	rs6062237	T	C	c	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr20	62588622	62588623	chr20:62588623:G:A	rs28423972	G	A	g	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr20	62588626	62588627	chr20:62588627:A:G	rs28489524	A	G	g	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr20	62588650	62588651	chr20:62588651:C:T	rs55650047	C	T	c	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr20	62612056	62612057	chr20:62612057:C:T	rs78149149	C	T	C	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr20	62612057	62612058	chr20:62612058:A:G	rs28477620	A	G	G	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr20	62841087	62841088	chr20:62841088:C:T	rs1048132	C	T	T	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr20	62992192	62992193	chr20:62992193:C:T	rs2427473	C	T	C	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr20	63010739	63010740	chr20:63010740:G:T	rs28549855	G	T	G	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr20	63022326	63022327	chr20:63022327:T:C	rs6011536	T	C	C	Hoxd9.mouse_homeodomain_1	7	1	-	7.1462160923678635	0.44239014577613167	GCCATAAAC
chr20	63368598	63368599	chr20:63368599:A:G	rs735500	A	G	A	Hoxd9.mouse_homeodomain_1	8	1	+	8.98901893988973	7.522691831404475	CCCATAAAA
chr20	63508439	63508440	chr20:63508440:G:A	rs1757699	G	A	g	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr20	63525130	63525131	chr20:63525131:T:C	rs375990	T	C	T	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr20	63751637	63751638	chr20:63751638:A:G	rs4809332	A	G	A	Hoxd9.mouse_homeodomain_1	5	1	+	7.522691831404475	1.1485021131579192	CCCATAAAG
chr20	63756741	63756742	chr20:63756742:G:A	rs6011084	G	A	G	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr20	63893603	63893604	chr20:63893604:T:A	rs6062570	T	A	A	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr20	64030674	64030675	chr20:64030675:T:C	rs6062338	T	C	T	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr21	5223289	5223290	chr21:5223290:T:C	rs71249989	T	C	.	Hoxd9.mouse_homeodomain_1	3	1	-	8.027213970992095	6.693135371129603	CACATAAAA
chr21	5297779	5297780	chr21:5297780:G:A	rs1206648776	G	A	.	Hoxd9.mouse_homeodomain_1	0	1	-	8.027213970992095	6.132666665683155	CACATAAAA
chr21	5312344	5312345	chr21:5312345:G:A	rs1386684967	G	A	.	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr21	5312367	5312368	chr21:5312368:A:G	rs1418182879	A	G	.	Hoxd9.mouse_homeodomain_1	6	1	+	8.027213970992095	1.3233880244003648	CACATAAAA
chr21	5384020	5384021	chr21:5384021:T:C	rs1188638111	T	C	.	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr21	6124325	6124326	chr21:6124326:C:T	rs1347441673	C	T	.	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr21	7259109	7259110	chr21:7259110:G:A	rs1357223467	G	A	.	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr21	7259122	7259123	chr21:7259123:G:C	rs1452013201	G	C	.	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr21	7289980	7289981	chr21:7289981:A:G	rs1307313191	A	G	.	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr21	7290172	7290173	chr21:7290173:A:G	rs1260788827	A	G	.	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr21	7290850	7290851	chr21:7290851:A:C	rs1484861299	A	C	.	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr21	7291850	7291851	chr21:7291851:A:G	rs1268278920	A	G	.	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr21	7292203	7292204	chr21:7292204:A:C	rs1454000637	A	C	.	Hoxd9.mouse_homeodomain_1	6	1	+	8.027213970992095	6.2801301561512854	CACATAAAA
chr21	8991548	8991549	chr21:8991549:T:C	rs74761841	T	C	.	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr21	8991562	8991563	chr21:8991563:T:C	rs78499736	T	C	.	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr21	8993317	8993318	chr21:8993318:C:T	rs74908361	C	T	.	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr21	9001915	9001916	chr21:9001916:C:T	rs77477417	C	T	.	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr21	9021352	9021353	chr21:9021353:G:T	rs372375901	G	T	.	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr21	9731017	9731018	chr21:9731018:C:A	rs1364491524	C	A	.	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr21	9736020	9736021	chr21:9736021:A:G	rs1020679183	A	G	.	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr21	9736037	9736038	chr21:9736038:T:C	rs28867706	T	C	.	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr21	9740550	9740551	chr21:9740551:G:A	rs28578517	G	A	.	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr21	9771569	9771570	chr21:9771570:G:A	rs2599020	G	A	.	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr21	9942859	9942860	chr21:9942860:G:A	rs867449292	G	A	G	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr21	9972687	9972688	chr21:9972688:G:A	rs71274178	G	A	G	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr21	10418984	10418985	chr21:10418985:T:C	rs997786787	T	C	t	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr21	10751784	10751785	chr21:10751785:G:A	rs145925058	G	A	.	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr21	10751825	10751826	chr21:10751826:A:C	rs28805947	A	C	.	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr21	10754546	10754547	chr21:10754547:C:A	rs62217579	C	A	.	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr21	10754558	10754559	chr21:10754559:G:A	rs62217578	G	A	.	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr21	10785756	10785757	chr21:10785757:T:G	rs1002277115	T	G	.	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr21	10785768	10785769	chr21:10785769:T:C	rs28784702	T	C	.	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr21	10786996	10786997	chr21:10786997:T:C	rs28853066	T	C	.	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr21	13445060	13445061	chr21:13445061:T:A	rs3119485	T	A	.	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr21	14119076	14119077	chr21:14119077:A:G	rs1115648	A	G	a	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr21	14153768	14153769	chr21:14153769:A:G	rs2822436	A	G	A	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr21	14206433	14206434	chr21:14206434:A:T	rs451807	A	T	A	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr21	14271378	14271379	chr21:14271379:T:C	rs62230076	T	C	T	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr21	14334009	14334010	chr21:14334010:A:G	rs2822578	A	G	A	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr21	14615482	14615483	chr21:14615483:G:A	rs76337047	G	A	G	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr21	14754483	14754484	chr21:14754484:C:T	rs7283943	C	T	T	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr21	14838869	14838870	chr21:14838870:T:G	rs6517050	T	G	G	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr21	14844077	14844078	chr21:14844078:T:C	rs8131259	T	C	T	Hoxd9.mouse_homeodomain_1	4	1	+	7.212456609225008	4.557409964362429	GCCATAAAG
chr21	15150024	15150025	chr21:15150025:C:T	rs2014048	C	T	C	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr21	15161319	15161320	chr21:15161320:C:A	rs9975709	C	A	c	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr21	15687317	15687318	chr21:15687318:G:C	rs9975160	G	C	G	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr21	15745129	15745130	chr21:15745130:G:A	rs6517611	G	A	A	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr21	15848743	15848744	chr21:15848744:G:A	rs7278699	G	A	G	Hoxd9.mouse_homeodomain_1	0	1	+	7.212456609225008	6.423571575367866	GCCATAAAG
chr21	16086819	16086820	chr21:16086820:T:C	rs16993551	T	C	T	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr21	16125367	16125368	chr21:16125368:A:T	rs9974231	A	T	A	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr21	16216529	16216530	chr21:16216530:G:T	rs16994668	G	T	G	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr21	16323776	16323777	chr21:16323777:A:G	rs115345477	A	G	A	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr21	16370009	16370010	chr21:16370010:A:G	rs2823756	A	G	G	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr21	16879806	16879807	chr21:16879807:A:G	rs374260	A	G	G	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr21	16908153	16908154	chr21:16908154:G:A	rs13051419	G	A	G	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr21	17044336	17044337	chr21:17044337:G:T	rs57645187	G	T	T	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr21	17159586	17159587	chr21:17159587:T:C	rs2824245	T	C	C	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr21	17195925	17195926	chr21:17195926:T:G	rs993272	T	G	G	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr21	17304958	17304959	chr21:17304959:T:C	rs62241465	T	C	C	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr21	17650309	17650310	chr21:17650310:A:C	rs2824416	A	C	A	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr21	17753803	17753804	chr21:17753804:T:G	rs73314011	T	G	T	Hoxd9.mouse_homeodomain_1	4	1	+	8.678783717710262	1.8369652703796566	GCCATAAAA
chr21	17784790	17784791	chr21:17784791:G:A	rs901819675	G	A	G	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr21	17784823	17784824	chr21:17784824:C:T	rs381462	C	T	C	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr21	17902470	17902471	chr21:17902471:C:G	rs150788898	C	G	C	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr21	17978790	17978791	chr21:17978791:G:A	rs197580	G	A	G	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr21	18118509	18118510	chr21:18118510:A:G	rs2824635	A	G	A	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr21	18679035	18679036	chr21:18679036:C:T	rs2824988	C	T	C	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr21	18831923	18831924	chr21:18831924:A:C	rs2825190	A	C	A	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr21	19045803	19045804	chr21:19045804:A:G	rs2825313	A	G	A	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr21	19049176	19049177	chr21:19049177:T:G	rs2825324	T	G	T	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr21	19119883	19119884	chr21:19119884:T:C	rs17179114	T	C	T	Hoxd9.mouse_homeodomain_1	5	1	-	8.678783717710262	2.304593999463707	GCCATAAAA
chr21	19198106	19198107	chr21:19198107:G:A	rs2211936	G	A	G	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr21	19875357	19875358	chr21:19875358:C:T	rs2825870	C	T	T	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr21	20232646	20232647	chr21:20232647:T:C	rs77166517	T	C	T	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr21	20417351	20417352	chr21:20417352:C:G	rs11088803	C	G	C	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr21	20687233	20687234	chr21:20687234:T:C	rs62205030	T	C	C	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr21	21065770	21065771	chr21:21065771:C:A	rs62207570	C	A	A	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr21	21290868	21290869	chr21:21290869:T:C	rs1004622	T	C	T	Hoxd9.mouse_homeodomain_1	5	1	-	7.1462160923678635	0.7720263741213071	GCCATAAAC
chr21	21624987	21624988	chr21:21624988:A:G	rs11702022	A	G	A	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr21	21864579	21864580	chr21:21864580:G:A	rs2224135	G	A	A	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr21	21897845	21897846	chr21:21897846:G:A	chr21:21897846:G:A	G	A	G	Hoxd9.mouse_homeodomain_1	1	1	-	7.9772278588234515	6.662425944490444	GCAATAAAA
chr21	22107363	22107364	chr21:22107364:G:C	rs117761137	G	C	G	Hoxd9.mouse_homeodomain_1	0	1	-	8.287463081002919	7.9772278588234515	CCAATAAAA
chr21	22206813	22206814	chr21:22206814:T:C	rs1888420	T	C	C	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr21	22246706	22246707	chr21:22246707:T:C	rs73225759	T	C	T	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr21	22294800	22294801	chr21:22294801:G:A	rs35810053	G	A	G	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr21	22414988	22414989	chr21:22414989:T:C	rs2827512	T	C	T	Hoxd9.mouse_homeodomain_1	4	1	+	7.889898683853121	5.234852038990543	ACCATAAAA
chr21	22582309	22582310	chr21:22582310:T:C	rs2827617	T	C	T	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr21	22902157	22902158	chr21:22902158:G:A	chr21:22902158:G:A	G	A	G	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr21	23004068	23004069	chr21:23004069:T:A	rs2827789	T	A	T	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr21	23472167	23472168	chr21:23472168:A:C	rs11087872	A	C	A	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr21	23555201	23555202	chr21:23555202:C:A	rs117801314	C	A	C	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr21	24042805	24042806	chr21:24042806:T:A	rs7276471	T	A	T	Hoxd9.mouse_homeodomain_1	4	1	+	8.98901893988973	2.147200492559124	CCCATAAAA
chr21	24042809	24042810	chr21:24042810:A:T	rs7275345	A	T	A	Hoxd9.mouse_homeodomain_1	8	1	+	8.98901893988973	6.056505815123662	CCCATAAAA
chr21	24219038	24219039	chr21:24219039:G:A	rs1910614	G	A	G	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr21	24273013	24273014	chr21:24273014:A:G	rs62215843	A	G	A	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr21	24420763	24420764	chr21:24420764:G:A	rs7283058	G	A	A	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr21	24453820	24453821	chr21:24453821:A:G	rs780150651	A	G	A	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr21	24488143	24488144	chr21:24488144:T:G	rs79546652	T	G	T	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr21	24492189	24492190	chr21:24492190:C:T	rs2829131	C	T	T	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr21	24577916	24577917	chr21:24577917:T:C	rs7281384	T	C	t	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr21	24715298	24715299	chr21:24715299:A:G	rs2829289	A	G	G	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr21	25104079	25104080	chr21:25104080:A:G	chr21:25104080:A:G	A	G	A	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr21	25203618	25203619	chr21:25203619:T:C	rs2829634	T	C	C	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr21	25204212	25204213	chr21:25204213:T:C	rs720164	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.287463081002919	6.953384481140425	CCAATAAAA
chr21	25324989	25324990	chr21:25324990:G:A	rs73156641	G	A	G	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr21	25790787	25790788	chr21:25790788:T:G	rs142018610	T	G	T	Hoxd9.mouse_homeodomain_1	5	1	-	7.212456609225008	5.315149056665012	GCCATAAAG
chr21	25837550	25837551	chr21:25837551:A:G	rs9982100	A	G	A	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr21	25986962	25986963	chr21:25986963:G:C	rs762479	G	C	C	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr21	26018168	26018169	chr21:26018169:C:T	rs928902	C	T	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.075409217893736	8.409487817756228	CCCGTTAAA
chr21	26079591	26079592	chr21:26079592:T:A	rs72635015	T	A	T	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr21	26099393	26099394	chr21:26099394:C:T	rs2830053	C	T	C	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr21	26121229	26121230	chr21:26121230:C:T	rs10482971	C	T	T	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr21	26158171	26158172	chr21:26158172:G:C	rs142891849	G	C	G	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr21	26246028	26246029	chr21:26246029:T:G	rs7275611	T	G	T	Hoxd9.mouse_homeodomain_1	4	1	+	8.409487817756228	1.5676693704256222	CCCATTAAA
chr21	26269343	26269344	chr21:26269344:G:A	rs468594	G	A	G	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr21	26460964	26460965	chr21:26460965:T:A	rs191997	T	A	A	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr21	26571815	26571816	chr21:26571816:G:A	rs222978	G	A	A	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr21	26571831	26571832	chr21:26571832:G:A	rs67851275	G	A	G	Hoxd9.mouse_homeodomain_1	0	1	+	8.678783717710262	7.889898683853121	GCCATAAAA
chr21	26617248	26617249	chr21:26617249:T:C	rs226310	T	C	C	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr21	26617281	26617282	chr21:26617282:C:T	rs226311	C	T	T	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr21	26795926	26795927	chr21:26795927:C:T	rs2830533	C	T	C	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr21	26837075	26837076	chr21:26837076:T:C	rs12140	T	C	T	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr21	26860332	26860333	chr21:26860333:G:A	rs142040620	G	A	g	Hoxd9.mouse_homeodomain_1	1	1	-	7.45645131454733	6.141649400214323	CCCATAAAC
chr21	26861538	26861539	chr21:26861539:T:A	rs9980869	T	A	T	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr21	26901281	26901282	chr21:26901282:T:C	rs162540	T	C	C	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr21	26901298	26901299	chr21:26901299:G:A	rs162539	G	A	G	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr21	26925534	26925535	chr21:26925535:G:A	rs9977087	G	A	G	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr21	26990058	26990059	chr21:26990059:C:T	rs233585	C	T	T	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr21	27190663	27190664	chr21:27190664:A:G	rs235949	A	G	a	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr21	27202335	27202336	chr21:27202336:A:G	rs914132	A	G	A	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr21	27326598	27326599	chr21:27326599:A:G	rs11088028	A	G	A	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr21	27407280	27407281	chr21:27407281:T:C	rs2830922	T	C	T	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr21	27573030	27573031	chr21:27573031:T:C	rs192728001	T	C	T	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr21	27690564	27690565	chr21:27690565:T:C	rs150374063	T	C	T	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr21	27909917	27909918	chr21:27909918:T:C	rs11910562	T	C	t	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr21	28012119	28012120	chr21:28012120:T:G	rs113739013	T	G	T	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr21	28127028	28127029	chr21:28127029:C:T	rs73183153	C	T	C	Hoxd9.mouse_homeodomain_1	1	1	+	8.409487817756228	7.094685903423221	CCCATTAAA
chr21	28269806	28269807	chr21:28269807:C:A	rs2831685	C	A	C	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr21	28294264	28294265	chr21:28294265:C:A	rs190913598	C	A	C	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr21	28444284	28444285	chr21:28444285:A:G	rs73897872	A	G	A	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr21	28550277	28550278	chr21:28550278:T:C	rs7283413	T	C	T	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr21	28747709	28747710	chr21:28747710:T:C	rs2065256	T	C	C	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr21	28822531	28822532	chr21:28822532:A:T	rs80152315	A	T	A	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr21	28975386	28975387	chr21:28975387:A:G	rs12233322	A	G	A	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr21	29003823	29003824	chr21:29003824:T:C	rs2150403	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.027213970992095	6.693135371129603	CACATAAAA
chr21	29005921	29005922	chr21:29005922:G:A	rs73901167	G	A	G	Hoxd9.mouse_homeodomain_1	2	1	-	7.1462160923678635	0.6587756347442264	GCCATAAAC
chr21	29007369	29007370	chr21:29007370:G:T	rs149347698	G	T	G	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr21	29090225	29090226	chr21:29090226:A:G	chr21:29090226:A:G	A	G	A	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr21	29232767	29232768	chr21:29232768:A:G	rs4315609	A	G	G	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr21	29232795	29232796	chr21:29232796:A:G	rs138146652	A	G	A	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr21	29237666	29237667	chr21:29237667:G:C	chr21:29237667:G:C	G	C	G	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr21	29481041	29481042	chr21:29481042:A:G	rs2832350	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	7.9772278588234515	6.643149258960959	GCAATAAAA
chr21	29634101	29634102	chr21:29634102:T:C	rs2008727	T	C	C	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr21	29634107	29634108	chr21:29634108:A:G	rs2008728	A	G	G	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr21	29826320	29826321	chr21:29826321:A:G	rs466026	A	G	A	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr21	30059224	30059225	chr21:30059225:G:T	rs71321317	G	T	G	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr21	30071994	30071995	chr21:30071995:A:G	rs117078566	A	G	A	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr21	30234192	30234193	chr21:30234193:T:C	rs2832668	T	C	T	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr21	30256184	30256185	chr21:30256185:G:A	rs79508493	G	A	G	Hoxd9.mouse_homeodomain_1	1	1	-	7.522691831404475	6.207889917071467	CCCATAAAG
chr21	30463520	30463521	chr21:30463521:G:A	rs8134027	G	A	G	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr21	31128426	31128427	chr21:31128427:T:G	rs68194389	T	G	T	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr21	31355057	31355058	chr21:31355058:G:A	rs148490390	G	A	G	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr21	31372185	31372186	chr21:31372186:A:G	rs490777	A	G	A	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr21	31374230	31374231	chr21:31374231:C:T	rs2300356	C	T	C	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr21	31374680	31374681	chr21:31374681:C:G	rs2300358	C	G	G	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr21	31532384	31532385	chr21:31532385:C:T	rs12483593	C	T	C	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr21	31875903	31875904	chr21:31875904:A:G	rs56079836	A	G	A	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr21	31983446	31983447	chr21:31983447:G:A	rs737103	G	A	G	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr21	32067559	32067560	chr21:32067560:A:C	chr21:32067560:A:C	A	C	A	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr21	32083436	32083437	chr21:32083437:A:G	rs141003367	A	G	A	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr21	32182674	32182675	chr21:32182675:G:A	rs9980733	G	A	G	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr21	32187568	32187569	chr21:32187569:T:A	rs2833703	T	A	T	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr21	32187580	32187581	chr21:32187581:C:T	rs12482717	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	+	8.98901893988973	7.094471634580788	CCCATAAAA
chr21	32382995	32382996	chr21:32382996:C:T	rs7276902	C	T	T	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr21	32403807	32403808	chr21:32403808:G:A	rs73190644	G	A	G	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr21	32427263	32427264	chr21:32427264:C:T	rs2833817	C	T	C	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr21	32509998	32509999	chr21:32509999:G:A	rs2833860	G	A	G	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr21	32886671	32886672	chr21:32886672:A:C	rs367901558	A	C	A	Hoxd9.mouse_homeodomain_1	7	1	+	7.1462160923678635	4.256800322337277	GCCATAAAC
chr21	32919399	32919400	chr21:32919400:T:C	rs2834005	T	C	C	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr21	33190542	33190543	chr21:33190543:C:G	rs9974243	C	G	C	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr21	33304826	33304827	chr21:33304827:G:A	rs8128184	G	A	G	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr21	33317652	33317653	chr21:33317653:A:T	rs7279547	A	T	A	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr21	33325602	33325603	chr21:33325603:T:C	rs1169220629	T	C	T	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr21	33433783	33433784	chr21:33433784:A:G	rs17882822	A	G	A	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr21	33820426	33820427	chr21:33820427:G:A	rs2834266	G	A	G	Hoxd9.mouse_homeodomain_1	0	1	-	7.522691831404475	5.628144526095533	CCCATAAAG
chr21	33821090	33821091	chr21:33821091:G:T	rs2244151	G	T	G	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr21	33914973	33914974	chr21:33914974:C:T	rs2284573	C	T	C	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr21	33939252	33939253	chr21:33939253:G:T	rs12627010	G	T	T	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr21	34023135	34023136	chr21:34023136:G:A	rs113176078	G	A	G	Hoxd9.mouse_homeodomain_1	2	1	-	8.98901893988973	2.5015784822660927	CCCATAAAA
chr21	34023137	34023138	chr21:34023138:G:C	rs11702497	G	C	G	Hoxd9.mouse_homeodomain_1	0	1	-	8.98901893988973	8.678783717710262	CCCATAAAA
chr21	34129386	34129387	chr21:34129387:C:G	rs569868093	C	G	C	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr21	34200582	34200583	chr21:34200583:T:A	rs11910160	T	A	T	Hoxd9.mouse_homeodomain_1	6	1	-	7.889898683853121	5.000482913822536	ACCATAAAA
chr21	34306725	34306726	chr21:34306726:A:G	rs2070438	A	G	A	Hoxd9.mouse_homeodomain_1	8	1	+	8.98901893988973	7.522691831404475	CCCATAAAA
chr21	34356980	34356981	chr21:34356981:A:G	rs2834467	A	G	A	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr21	34546827	34546828	chr21:34546828:T:C	rs77251346	T	C	T	Hoxd9.mouse_homeodomain_1	5	1	+	8.409487817756228	7.091711387329735	CCCATTAAA
chr21	34569470	34569471	chr21:34569471:T:C	rs2252721	T	C	C	Hoxd9.mouse_homeodomain_1	3	1	-	8.027213970992095	6.693135371129603	CACATAAAA
chr21	34594809	34594810	chr21:34594810:G:A	rs55977675	G	A	g	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr21	34599873	34599874	chr21:34599874:G:A	rs2284608	G	A	A	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr21	34667764	34667765	chr21:34667765:C:T	rs117184570	C	T	C	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr21	34704450	34704451	chr21:34704451:G:A	rs140973094	G	A	G	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr21	34707905	34707906	chr21:34707906:A:G	rs6517253	A	G	G	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr21	34775306	34775307	chr21:34775307:T:G	rs2211702	T	G	G	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr21	34797289	34797290	chr21:34797290:C:A	rs762068446	C	A	C	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr21	34878466	34878467	chr21:34878467:G:A	rs2834659	G	A	G	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr21	35036329	35036330	chr21:35036330:T:G	rs2294162	T	G	T	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr21	35203514	35203515	chr21:35203515:C:T	rs141552901	C	T	C	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr21	35254531	35254532	chr21:35254532:G:A	rs148617503	G	A	G	Hoxd9.mouse_homeodomain_1	2	1	-	7.654940340027237	1.1674998824035994	CCCGTAAAA
chr21	35254534	35254535	chr21:35254535:G:T	rs2242704	G	T	G	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr21	35254535	35254536	chr21:35254536:T:G	rs144273412	T	G	T	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr21	35302381	35302382	chr21:35302382:T:G	rs9984389	T	G	G	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr21	35303356	35303357	chr21:35303357:T:C	rs56015451	T	C	T	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr21	35507384	35507385	chr21:35507385:G:A	rs2834949	G	A	G	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr21	35629189	35629190	chr21:35629190:C:T	rs723925	C	T	T	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr21	35833246	35833247	chr21:35833247:G:A	rs75925138	G	A	G	Hoxd9.mouse_homeodomain_1	2	1	-	7.1462160923678635	0.6587756347442264	GCCATAAAC
chr21	35924385	35924386	chr21:35924386:C:A	rs8130324	C	A	C	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr21	35927372	35927373	chr21:35927373:G:A	rs2246860	G	A	g	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr21	35992280	35992281	chr21:35992281:C:T	rs2845739	C	T	C	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr21	36239264	36239265	chr21:36239265:G:C	rs2245397	G	C	G	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr21	36239278	36239279	chr21:36239279:G:T	rs2835325	G	T	G	Hoxd9.mouse_homeodomain_1	1	1	-	7.34470511784777	6.382900148950135	GCCGTAAAA
chr21	36500148	36500149	chr21:36500149:C:T	rs2000546	C	T	C	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr21	36510030	36510031	chr21:36510031:A:G	rs16994180	A	G	A	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr21	36909919	36909920	chr21:36909920:C:G	rs73389372	C	G	C	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr21	37047205	37047206	chr21:37047206:T:C	rs142104571	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.9772278588234515	6.643149258960959	GCAATAAAA
chr21	37224596	37224597	chr21:37224597:A:G	rs79315103	A	G	A	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr21	37348721	37348722	chr21:37348722:G:A	rs151238972	G	A	G	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr21	37348756	37348757	chr21:37348757:T:G	rs560658793	T	G	T	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr21	37389779	37389780	chr21:37389780:G:A	chr21:37389780:G:A	G	A	G	Hoxd9.mouse_homeodomain_1	1	1	-	8.678783717710262	7.363981803377255	GCCATAAAA
chr21	37425129	37425130	chr21:37425130:A:G	rs74883378	A	G	A	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr21	37450555	37450556	chr21:37450556:C:T	rs11911857	C	T	C	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr21	37599412	37599413	chr21:37599413:G:A	rs4816566	G	A	A	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr21	37636893	37636894	chr21:37636894:T:C	rs2835847	T	C	c	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr21	37787402	37787403	chr21:37787403:G:T	rs80247654	G	T	G	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr21	37994505	37994506	chr21:37994506:T:C	rs2836102	T	C	T	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr21	38121377	38121378	chr21:38121378:G:A	rs73904700	G	A	G	Hoxd9.mouse_homeodomain_1	2	1	-	7.654940340027237	1.1674998824035994	CCCGTAAAA
chr21	38303444	38303445	chr21:38303445:G:A	rs528202760	G	A	G	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr21	38499510	38499511	chr21:38499511:T:C	rs2836444	T	C	T	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr21	38503606	38503607	chr21:38503607:G:C	rs73906313	G	C	G	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr21	38541204	38541205	chr21:38541205:C:T	rs2836492	C	T	T	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr21	38592940	38592941	chr21:38592941:T:A	rs13052090	T	A	T	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr21	38592942	38592943	chr21:38592943:C:T	rs13051259	C	T	C	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr21	38748005	38748006	chr21:38748006:A:G	rs2836658	A	G	G	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr21	38800411	38800412	chr21:38800412:T:C	rs8134019	T	C	T	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr21	38830879	38830880	chr21:38830880:C:T	rs998855	C	T	C	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr21	38912775	38912776	chr21:38912776:C:T	rs1027052863	C	T	C	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr21	38950752	38950753	chr21:38950753:C:T	rs2836779	C	T	T	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr21	39043445	39043446	chr21:39043446:T:C	rs2836855	T	C	T	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr21	39083191	39083192	chr21:39083192:A:G	rs57869236	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.287463081002919	6.953384481140425	CCAATAAAA
chr21	39099094	39099095	chr21:39099095:T:C	rs76936194	T	C	C	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr21	39184755	39184756	chr21:39184756:G:A	rs113189535	G	A	G	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr21	39489749	39489750	chr21:39489750:A:G	rs7280971	A	G	a	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr21	39529244	39529245	chr21:39529245:T:C	rs117114519	T	C	C	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr21	39529255	39529256	chr21:39529256:C:G	rs117465668	C	G	C	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr21	39531999	39532000	chr21:39532000:A:G	rs928290	A	G	G	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr21	39532000	39532001	chr21:39532001:C:T	rs34857483	C	T	C	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr21	39553580	39553581	chr21:39553581:G:A	rs11088484	G	A	G	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr21	39665871	39665872	chr21:39665872:A:G	rs4818066	A	G	a	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr21	39746417	39746418	chr21:39746418:G:A	rs61040557	G	A	G	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr21	39751625	39751626	chr21:39751626:G:T	rs7278720	G	T	G	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr21	40191537	40191538	chr21:40191538:G:A	rs726106	G	A	G	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr21	40284605	40284606	chr21:40284606:C:A	rs111422354	C	A	C	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr21	40466035	40466036	chr21:40466036:C:T	rs78664731	C	T	C	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr21	40633745	40633746	chr21:40633746:T:C	rs67044568	T	C	T	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr21	40639905	40639906	chr21:40639906:G:A	rs28496000	G	A	G	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr21	40743142	40743143	chr21:40743143:T:C	rs2205146	T	C	C	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr21	41110886	41110887	chr21:41110887:G:A	rs73222204	G	A	G	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr21	41111101	41111102	chr21:41111102:C:T	rs56767850	C	T	C	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr21	41198316	41198317	chr21:41198317:T:C	rs8130405	T	C	C	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr21	41257967	41257968	chr21:41257968:A:G	rs4818225	A	G	G	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr21	41349179	41349180	chr21:41349180:A:C	rs17000823	A	C	A	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr21	41472034	41472035	chr21:41472035:T:A	rs458213	T	A	T	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr21	41478147	41478148	chr21:41478148:T:C	rs4818239	T	C	T	Hoxd9.mouse_homeodomain_1	7	1	-	7.091711387329735	0.38788544073800313	CCCATCAAA
chr21	41560259	41560260	chr21:41560260:T:C	rs2298686	T	C	C	Hoxd9.mouse_homeodomain_1	5	1	-	7.241935125048919	0.867745406802363	CCCATACAA
chr21	41593014	41593015	chr21:41593015:A:G	rs137999292	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	7.45645131454733	6.122372714684838	CCCATAAAC
chr21	41640908	41640909	chr21:41640909:G:C	rs13049373	G	C	C	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr21	41750506	41750507	chr21:41750507:A:G	rs13049875	A	G	A	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr21	41826824	41826825	chr21:41826825:G:A	rs28516731	G	A	A	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr21	41832094	41832095	chr21:41832095:C:T	rs1218113211	C	T	C	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr21	41880046	41880047	chr21:41880047:C:T	rs79530026	C	T	T	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr21	41928910	41928911	chr21:41928911:A:G	rs56104533	A	G	A	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr21	41928930	41928931	chr21:41928931:G:A	rs7280126	G	A	G	Hoxd9.mouse_homeodomain_1	2	1	-	7.889898683853121	1.4024582262294842	ACCATAAAA
chr21	41955483	41955484	chr21:41955484:A:C	rs117037527	A	C	C	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr21	41976554	41976555	chr21:41976555:T:A	rs9980268	T	A	T	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr21	42013047	42013048	chr21:42013048:T:C	rs9984999	T	C	C	Hoxd9.mouse_homeodomain_1	3	1	-	8.409487817756228	7.075409217893736	CCCATTAAA
chr21	42159233	42159234	chr21:42159234:G:T	rs9975104	G	T	G	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr21	42195412	42195413	chr21:42195413:C:T	rs117223429	C	T	C	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr21	42201385	42201386	chr21:42201386:C:G	rs2168344	C	G	C	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr21	42233950	42233951	chr21:42233951:G:T	rs9984192	G	T	G	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr21	42233986	42233987	chr21:42233987:T:C	rs181459392	T	C	T	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr21	42344335	42344336	chr21:42344336:G:C	rs114490127	G	C	G	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr21	42385682	42385683	chr21:42385683:G:A	rs958597476	G	A	G	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr21	42393723	42393724	chr21:42393724:C:T	rs113393660	C	T	c	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr21	42396020	42396021	chr21:42396021:C:G	rs56369547	C	G	C	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr21	42404419	42404420	chr21:42404420:G:A	rs2156309	G	A	G	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr21	42518599	42518600	chr21:42518600:A:G	rs62215907	A	G	A	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr21	42546033	42546034	chr21:42546034:A:G	rs228079	A	G	G	Hoxd9.mouse_homeodomain_1	4	1	-	7.241935125048919	4.5868884801863405	CCCATACAA
chr21	42568999	42569000	chr21:42569000:G:A	rs112751911	G	A	G	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr21	42600035	42600036	chr21:42600036:T:C	rs379010	T	C	C	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr21	42777969	42777970	chr21:42777970:C:T	rs1893594	C	T	C	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr21	42812944	42812945	chr21:42812945:A:C	rs79072756	A	C	C	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr21	42880867	42880868	chr21:42880868:G:A	rs2839596	G	A	A	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr21	43025181	43025182	chr21:43025182:C:T	rs234720	C	T	C	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr21	43300302	43300303	chr21:43300303:T:A	rs2051406	T	A	.	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr21	43358433	43358434	chr21:43358434:G:A	rs1475879	G	A	.	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr21	43365008	43365009	chr21:43365009:G:A	rs539072	G	A	.	Hoxd9.mouse_homeodomain_1	2	1	-	7.34470511784777	0.8572646602241328	GCCGTAAAA
chr21	43644414	43644415	chr21:43644415:C:A	rs2246602	C	A	C	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr21	43645451	43645452	chr21:43645452:T:C	rs77667183	T	C	C	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr21	44092474	44092475	chr21:44092475:G:C	rs7277269	G	C	C	Hoxd9.mouse_homeodomain_1	1	1	-	7.1462160923678635	0.7366828635854974	GCCATAAAC
chr21	44348466	44348467	chr21:44348467:T:C	rs734336	T	C	C	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr21	44356817	44356818	chr21:44356818:A:G	rs4818910	A	G	G	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr21	44407790	44407791	chr21:44407791:C:T	rs1368305033	C	T	C	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr21	44712969	44712970	chr21:44712970:G:T	rs932281	G	T	G	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr21	44759108	44759109	chr21:44759109:G:A	rs434608	G	A	A	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr21	44780354	44780355	chr21:44780355:T:C	rs4818976	T	C	T	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr21	44792664	44792665	chr21:44792665:G:A	rs9978131	G	A	G	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr21	44849610	44849611	chr21:44849611:G:A	rs741951	G	A	G	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr21	44859589	44859590	chr21:44859590:T:C	rs235324	T	C	C	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr21	44875751	44875752	chr21:44875752:G:T	rs180314	G	T	T	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr21	44879341	44879342	chr21:44879342:C:T	rs235306	C	T	C	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr21	44881510	44881511	chr21:44881511:A:G	rs34897870	A	G	A	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr21	44881525	44881526	chr21:44881526:C:G	rs450206	C	G	C	Hoxd9.mouse_homeodomain_1	2	1	+	8.409487817756228	4.941496160303898	CCCATTAAA
chr21	44915366	44915367	chr21:44915367:T:C	rs2838735	T	C	T	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr21	44929674	44929675	chr21:44929675:A:G	rs11702488	A	G	A	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr21	45009948	45009949	chr21:45009949:A:T	rs7277264	A	T	T	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr21	45060162	45060163	chr21:45060163:C:T	rs75319464	C	T	C	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr21	45079729	45079730	chr21:45079730:G:A	rs139212076	G	A	G	Hoxd9.mouse_homeodomain_1	1	1	-	8.409487817756228	7.094685903423221	CCCATTAAA
chr21	45126440	45126441	chr21:45126441:C:T	rs111812981	C	T	C	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr21	45126441	45126442	chr21:45126442:G:A	rs8129934	G	A	G	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr21	45126476	45126477	chr21:45126477:T:C	rs73230680	T	C	T	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr21	45161846	45161847	chr21:45161847:C:A	rs8130097	C	A	c	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr21	45168901	45168902	chr21:45168902:G:A	rs28782181	G	A	G	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr21	45211780	45211781	chr21:45211781:C:T	rs57570541	C	T	C	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr21	45211782	45211783	chr21:45211783:C:T	rs2838817	C	T	c	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr21	45240039	45240040	chr21:45240040:C:T	rs4819041	C	T	T	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr21	45250485	45250486	chr21:45250486:C:G	rs1999333	C	G	C	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr21	45282906	45282907	chr21:45282907:A:G	rs74961332	A	G	.	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr21	45296889	45296890	chr21:45296890:T:C	rs9977389	T	C	C	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr21	45339983	45339984	chr21:45339984:T:C	rs75185599	T	C	T	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr21	45360250	45360251	chr21:45360251:G:A	rs13051237	G	A	A	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr21	45364304	45364305	chr21:45364305:A:G	rs8127996	A	G	A	Hoxd9.mouse_homeodomain_1	4	1	-	7.091711387329735	4.436664742467157	CCCATCAAA
chr21	45454023	45454024	chr21:45454024:C:T	rs115551841	C	T	c	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr21	45539172	45539173	chr21:45539173:A:G	rs9977610	A	G	G	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr21	45595580	45595581	chr21:45595581:G:A	rs79623645	G	A	G	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr21	45595597	45595598	chr21:45595598:G:A	rs7282658	G	A	G	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr21	45624601	45624602	chr21:45624602:C:T	rs73907803	C	T	c	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr21	45624602	45624603	chr21:45624603:A:G	rs4819135	A	G	G	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr21	45951114	45951115	chr21:45951115:G:C	chr21:45951115:G:C	G	C	G	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr21	45952695	45952696	chr21:45952696:G:A	rs452877	G	A	A	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr21	46076951	46076952	chr21:46076952:G:A	rs58059887	G	A	G	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr21	46171241	46171242	chr21:46171242:G:A	rs2839131	G	A	G	Hoxd9.mouse_homeodomain_1	1	1	-	7.212456609225008	5.897654694892	GCCATAAAG
chr21	46357147	46357148	chr21:46357148:G:A	rs2839223	G	A	A	Hoxd9.mouse_homeodomain_1	1	1	-	7.241935125048919	5.927133210715912	CCCATACAA
chr22	10716969	10716970	chr22:10716970:C:T	rs1384237270	C	T	.	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr22	10778554	10778555	chr22:10778555:A:C	rs1317127587	A	C	.	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr22	12202249	12202250	chr22:12202250:C:A	rs9728637	C	A	.	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr22	12202307	12202308	chr22:12202308:A:G	rs1338580672	A	G	.	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr22	15675975	15675976	chr22:15675976:C:T	rs141308346	C	T	.	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr22	15785949	15785950	chr22:15785950:A:C	rs71324597	A	C	A	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr22	16029394	16029395	chr22:16029395:G:A	rs1250109171	G	A	.	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr22	16056208	16056209	chr22:16056209:T:C	rs1411777908	T	C	.	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr22	16146649	16146650	chr22:16146650:G:T	rs1413265715	G	T	G	Hoxd9.mouse_homeodomain_1	0	1	+	7.212456609225008	5.628144526095533	GCCATAAAG
chr22	16389834	16389835	chr22:16389835:T:G	rs131534	T	G	.	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr22	16391325	16391326	chr22:16391326:A:G	rs117844802	A	G	.	Hoxd9.mouse_homeodomain_1	8	1	+	8.678783717710262	7.212456609225008	GCCATAAAA
chr22	16391329	16391330	chr22:16391330:G:A	rs7292129	G	A	.	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr22	16912985	16912986	chr22:16912986:C:T	rs17444804	C	T	.	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr22	16929237	16929238	chr22:16929238:C:T	rs5994093	C	T	T	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr22	17151002	17151003	chr22:17151003:T:C	rs5992630	T	C	T	Hoxd9.mouse_homeodomain_1	8	1	-	7.241935125048919	5.775608016563663	CCCATAATA
chr22	17221887	17221888	chr22:17221888:C:T	rs737967	C	T	C	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr22	17258620	17258621	chr22:17258621:G:A	rs73153435	G	A	G	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr22	17541914	17541915	chr22:17541915:C:T	rs1296794	C	T	C	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr22	17601301	17601302	chr22:17601302:C:T	rs142511913	C	T	C	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr22	17625567	17625568	chr22:17625568:G:C	rs5747290	G	C	G	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr22	17738545	17738546	chr22:17738546:G:A	rs5992808	G	A	G	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr22	17896393	17896394	chr22:17896394:T:A	rs3213927	T	A	A	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr22	17918830	17918831	chr22:17918831:G:C	rs34263881	G	C	C	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr22	17918853	17918854	chr22:17918854:G:C	rs34740481	G	C	C	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr22	18042933	18042934	chr22:18042934:T:C	rs463271	T	C	C	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr22	18057098	18057099	chr22:18057099:C:T	rs75849519	C	T	C	Hoxd9.mouse_homeodomain_1	1	1	+	6.943160709270972	5.628358794937966	CCCATTAAG
chr22	18137133	18137134	chr22:18137134:G:A	rs2041779	G	A	.	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr22	18137145	18137146	chr22:18137146:G:T	rs9617667	G	T	.	Hoxd9.mouse_homeodomain_1	2	1	-	7.241935125048919	6.540379266162109	CCCATACAA
chr22	19195300	19195301	chr22:19195301:T:C	rs1771546	T	C	C	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr22	19271830	19271831	chr22:19271831:T:G	rs2518862	T	G	G	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr22	19385132	19385133	chr22:19385133:C:T	rs2013516	C	T	T	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr22	19562819	19562820	chr22:19562820:T:C	rs5746775	T	C	C	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr22	19608379	19608380	chr22:19608380:G:A	rs542977796	G	A	G	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr22	19630075	19630076	chr22:19630076:C:T	rs900469096	C	T	C	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr22	19647142	19647143	chr22:19647143:C:G	rs7291613	C	G	C	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr22	19757316	19757317	chr22:19757317:G:C	rs41299445	G	C	G	Hoxd9.mouse_homeodomain_1	1	1	-	6.876920192413827	0.4673869636314629	CCCATTAAC
chr22	19873603	19873604	chr22:19873604:T:C	rs7285948	T	C	C	Hoxd9.mouse_homeodomain_1	5	1	-	7.9772278588234515	1.603038140576896	GCAATAAAA
chr22	19873633	19873634	chr22:19873634:A:G	rs737853	A	G	G	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr22	19873637	19873638	chr22:19873638:C:T	rs7290770	C	T	c	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr22	20020649	20020650	chr22:20020650:G:C	rs73387800	G	C	G	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr22	20280165	20280166	chr22:20280166:G:A	rs701415	G	A	G	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr22	20280181	20280182	chr22:20280182:C:T	rs854952	C	T	C	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr22	20581670	20581671	chr22:20581671:G:C	rs746174469	G	C	.	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr22	20611982	20611983	chr22:20611983:T:C	rs650538	T	C	.	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr22	20844252	20844253	chr22:20844253:T:G	rs178061	T	G	T	Hoxd9.mouse_homeodomain_1	7	1	-	6.943160709270972	4.053744939240386	CCCATTAAG
chr22	20948636	20948637	chr22:20948637:C:T	rs2266953	C	T	T	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr22	21911213	21911214	chr22:21911214:T:A	rs2876982	T	A	A	Hoxd9.mouse_homeodomain_1	4	1	+	7.674217025556723	0.8323985782261166	CTCATAAAA
chr22	21935024	21935025	chr22:21935025:G:A	rs5995269	G	A	A	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr22	21967168	21967169	chr22:21967169:C:T	rs6000343	C	T	C	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr22	21981241	21981242	chr22:21981242:G:A	rs5756326	G	A	G	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr22	22046024	22046025	chr22:22046025:C:T	rs738865	C	T	c	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr22	22177185	22177186	chr22:22177186:T:C	rs5757247	T	C	.	Hoxd9.mouse_homeodomain_1	4	1	+	7.212456609225008	4.557409964362429	GCCATAAAG
chr22	22207197	22207198	chr22:22207198:T:C	rs5757416	T	C	.	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr22	22207220	22207221	chr22:22207221:C:T	rs5757417	C	T	.	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr22	22256800	22256801	chr22:22256801:C:G	rs6001606	C	G	.	Hoxd9.mouse_homeodomain_1	0	1	+	6.943160709270972	6.632925487091506	CCCATTAAG
chr22	22378690	22378691	chr22:22378691:G:C	rs528852095	G	C	.	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr22	22574839	22574840	chr22:22574840:T:C	rs715593	T	C	t	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr22	22655579	22655580	chr22:22655580:C:T	rs461862	C	T	.	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr22	22692747	22692748	chr22:22692748:T:C	rs3814997	T	C	.	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr22	22717779	22717780	chr22:22717780:G:T	rs6003241	G	T	.	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr22	22721253	22721254	chr22:22721254:A:G	rs76618767	A	G	.	Hoxd9.mouse_homeodomain_1	5	1	+	7.1462160923678635	0.7720263741213071	GCCATAAAC
chr22	22721255	22721256	chr22:22721256:A:G	rs78410149	A	G	.	Hoxd9.mouse_homeodomain_1	7	1	+	7.1462160923678635	0.44239014577613167	GCCATAAAC
chr22	22745538	22745539	chr22:22745539:G:A	rs13057415	G	A	.	Hoxd9.mouse_homeodomain_1	0	1	-	6.943160709270972	5.048613403962031	CCCATTAAG
chr22	22806872	22806873	chr22:22806873:G:A	rs62220433	G	A	.	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr22	22868249	22868250	chr22:22868250:C:A	rs76959583	C	A	.	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr22	22925878	22925879	chr22:22925879:A:G	rs406696	A	G	.	Hoxd9.mouse_homeodomain_1	4	1	-	8.027213970992095	5.372167326129518	CACATAAAA
chr22	23004288	23004289	chr22:23004289:G:T	chr22:23004289:G:T	G	T	G	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr22	23180274	23180275	chr22:23180275:G:A	rs76654237	G	A	G	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr22	23182919	23182920	chr22:23182920:C:T	rs12484096	C	T	C	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr22	23216373	23216374	chr22:23216374:A:T	rs2267015	A	T	T	Hoxd9.mouse_homeodomain_1	4	1	-	7.889898683853121	1.0480802365225155	ACCATAAAA
chr22	23245977	23245978	chr22:23245978:G:A	rs9612266	G	A	G	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr22	23246005	23246006	chr22:23246006:G:A	rs2267018	G	A	A	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr22	23294353	23294354	chr22:23294354:G:A	rs2267025	G	A	g	Hoxd9.mouse_homeodomain_1	0	1	+	8.678783717710262	7.889898683853121	GCCATAAAA
chr22	23315751	23315752	chr22:23315752:T:C	rs113629387	T	C	N	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr22	23355113	23355114	chr22:23355114:C:T	rs3949149	C	T	c	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr22	23510306	23510307	chr22:23510307:A:G	rs4822422	A	G	a	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr22	23537151	23537152	chr22:23537152:C:T	rs131393	C	T	C	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr22	23682120	23682121	chr22:23682121:C:T	rs5759960	C	T	.	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr22	23717261	23717262	chr22:23717262:G:A	rs149502274	G	A	g	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr22	23796711	23796712	chr22:23796712:G:C	rs79277445	G	C	G	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr22	23816509	23816510	chr22:23816510:G:C	rs2070456	G	C	G	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr22	23816521	23816522	chr22:23816522:A:G	rs2073392	A	G	G	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr22	23993906	23993907	chr22:23993907:G:T	rs1258015661	G	T	T	Hoxd9.mouse_homeodomain_1	8	1	-	7.45645131454733	8.98901893988973	CCCATAAAC
chr22	24002951	24002952	chr22:24002952:T:C	rs1201026877	T	C	T	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr22	24434403	24434404	chr22:24434404:T:C	rs140915103	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.889898683853121	6.555820083990628	ACCATAAAA
chr22	24482835	24482836	chr22:24482836:T:C	rs5760446	T	C	t	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr22	24684988	24684989	chr22:24684989:T:G	rs2330908	T	G	T	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr22	24695427	24695428	chr22:24695428:C:T	rs6004240	C	T	c	Hoxd9.mouse_homeodomain_1	0	1	-	7.1462160923678635	6.357331058510722	GCCATAAAC
chr22	24723332	24723333	chr22:24723333:T:C	rs140345	T	C	T	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr22	24769309	24769310	chr22:24769310:A:G	rs5760631	A	G	A	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr22	24994444	24994445	chr22:24994445:C:T	rs117352788	C	T	C	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr22	25015286	25015287	chr22:25015287:A:G	rs1883281	A	G	A	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr22	25050910	25050911	chr22:25050911:A:T	rs9306404	A	T	T	Hoxd9.mouse_homeodomain_1	1	1	-	7.674217025556723	8.027213970992095	CTCATAAAA
chr22	25076215	25076216	chr22:25076216:C:A	rs9612855	C	A	C	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr22	25114790	25114791	chr22:25114791:T:C	rs16979615	T	C	T	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr22	25202468	25202469	chr22:25202469:C:G	rs747588930	C	G	C	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr22	25202483	25202484	chr22:25202484:T:G	rs148374073	T	G	T	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr22	25202488	25202489	chr22:25202489:T:C	rs571220281	T	C	T	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr22	25215110	25215111	chr22:25215111:A:G	rs6519575	A	G	A	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr22	25265757	25265758	chr22:25265758:G:A	rs9612921	G	A	g	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr22	25281553	25281554	chr22:25281554:C:T	rs9624793	C	T	C	Hoxd9.mouse_homeodomain_1	1	1	+	6.876920192413827	5.5621182780808205	CCCATTAAC
chr22	25354964	25354965	chr22:25354965:A:C	rs149245368	A	C	.	Hoxd9.mouse_homeodomain_1	8	1	+	7.889898683853121	6.357331058510722	ACCATAAAA
chr22	25356815	25356816	chr22:25356816:G:C	rs133193	G	C	.	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr22	25411515	25411516	chr22:25411516:A:G	rs133257	A	G	N	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr22	25479835	25479836	chr22:25479836:T:C	rs6004669	T	C	C	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr22	25479845	25479846	chr22:25479846:G:A	rs9612975	G	A	G	Hoxd9.mouse_homeodomain_1	2	1	-	7.1462160923678635	0.6587756347442264	GCCATAAAC
chr22	25646166	25646167	chr22:25646167:T:C	rs77968350	T	C	C	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr22	25751522	25751523	chr22:25751523:G:A	rs6004754	G	A	G	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr22	25787563	25787564	chr22:25787564:G:A	rs5752207	G	A	G	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr22	25797856	25797857	chr22:25797857:C:T	rs2877299	C	T	C	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr22	25909020	25909021	chr22:25909021:A:G	rs5761308	A	G	A	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr22	26029332	26029333	chr22:26029333:T:C	rs11913497	T	C	C	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr22	26029375	26029376	chr22:26029376:T:C	rs56338632	T	C	C	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr22	26231125	26231126	chr22:26231126:C:T	rs73879856	C	T	C	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr22	26237390	26237391	chr22:26237391:T:A	rs1028494	T	A	A	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr22	26243829	26243830	chr22:26243830:A:G	rs985175088	A	G	A	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr22	26255799	26255800	chr22:26255800:T:C	rs737792	T	C	T	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr22	26269132	26269133	chr22:26269133:A:G	rs667270	A	G	G	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr22	26323168	26323169	chr22:26323169:G:A	rs639526	G	A	G	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr22	26374664	26374665	chr22:26374665:T:C	rs731275	T	C	T	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr22	26574936	26574937	chr22:26574937:G:T	rs17404243	G	T	G	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr22	26632934	26632935	chr22:26632935:T:C	rs5761648	T	C	T	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr22	26725492	26725493	chr22:26725493:T:C	rs73165467	T	C	T	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr22	26979565	26979566	chr22:26979566:G:A	rs5997150	G	A	.	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr22	26987372	26987373	chr22:26987373:T:A	rs78402386	T	A	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.522691831404475	5.51921069459583	CCCATAAAG
chr22	26992878	26992879	chr22:26992879:G:C	rs9613331	G	C	C	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr22	27150809	27150810	chr22:27150810:C:T	rs5997181	C	T	C	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr22	27150814	27150815	chr22:27150815:T:G	rs5997182	T	G	G	Hoxd9.mouse_homeodomain_1	4	1	+	8.409487817756228	1.5676693704256222	CCCATTAAA
chr22	27215092	27215093	chr22:27215093:T:C	rs75572116	T	C	T	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr22	27293679	27293680	chr22:27293680:G:A	rs737806	G	A	G	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr22	27294016	27294017	chr22:27294017:G:A	rs728804	G	A	G	Hoxd9.mouse_homeodomain_1	1	1	-	8.287463081002919	6.972661166669912	CCAATAAAA
chr22	27316186	27316187	chr22:27316187:G:A	rs34856866	G	A	G	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr22	27389847	27389848	chr22:27389848:T:C	rs136923	T	C	C	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr22	27480014	27480015	chr22:27480015:A:G	rs114763548	A	G	A	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr22	27507620	27507621	chr22:27507621:C:T	rs6005485	C	T	C	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr22	27507621	27507622	chr22:27507622:A:T	rs6005486	A	T	A	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr22	27709852	27709853	chr22:27709853:A:G	rs11090507	A	G	G	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr22	27785224	27785225	chr22:27785225:C:T	rs141103168	C	T	C	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr22	27919660	27919661	chr22:27919661:A:T	rs192136138	A	T	A	Hoxd9.mouse_homeodomain_1	1	1	+	8.027213970992095	7.674217025556723	CACATAAAA
chr22	28030594	28030595	chr22:28030595:A:C	chr22:28030595:A:C	A	C	A	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr22	28030600	28030601	chr22:28030601:G:A	rs1156881178	G	A	G	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr22	28252656	28252657	chr22:28252657:G:A	rs9613581	G	A	G	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr22	28272814	28272815	chr22:28272815:G:A	rs5762543	G	A	G	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr22	28402180	28402181	chr22:28402181:C:G	rs550192799	C	G	C	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr22	28422041	28422042	chr22:28422042:A:G	rs16986400	A	G	G	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr22	28886213	28886214	chr22:28886214:T:G	rs565057646	T	G	T	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr22	29014243	29014244	chr22:29014244:A:C	rs4823003	A	C	C	Hoxd9.mouse_homeodomain_1	4	1	-	7.9772278588234515	1.1354094114928457	GCAATAAAA
chr22	29021920	29021921	chr22:29021921:A:G	rs9613775	A	G	A	Hoxd9.mouse_homeodomain_1	8	1	+	8.409487817756228	6.943160709270972	CCCATTAAA
chr22	29061633	29061634	chr22:29061634:G:A	rs134558	G	A	G	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr22	29084411	29084412	chr22:29084412:T:A	rs134629	T	A	A	Hoxd9.mouse_homeodomain_1	6	1	-	8.98901893988973	6.099603169859144	CCCATAAAA
chr22	29276303	29276304	chr22:29276304:A:G	rs9613855	A	G	A	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr22	29435218	29435219	chr22:29435219:G:A	rs71329486	G	A	g	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr22	29437649	29437650	chr22:29437650:C:G	rs174718	C	G	-	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr22	29597399	29597400	chr22:29597400:A:T	rs185432254	A	T	A	Hoxd9.mouse_homeodomain_1	5	1	+	7.674217025556723	7.094685903423221	CTCATAAAA
chr22	29635918	29635919	chr22:29635919:G:A	rs548196672	G	A	G	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr22	29657973	29657974	chr22:29657974:A:G	rs5752949	A	G	C	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr22	29856467	29856468	chr22:29856468:T:C	rs28647168	T	C	T	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr22	30026875	30026876	chr22:30026876:T:C	rs41172	T	C	T	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr22	30210996	30210997	chr22:30210997:C:T	rs9614164	C	T	C	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr22	30248698	30248699	chr22:30248699:C:T	rs73881424	C	T	T	Hoxd9.mouse_homeodomain_1	2	1	+	7.091711387329735	0.6042709297060974	CCCATCAAA
chr22	30427208	30427209	chr22:30427209:T:C	rs5753130	T	C	C	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr22	30569769	30569770	chr22:30569770:T:C	rs42938	T	C	C	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr22	30572984	30572985	chr22:30572985:C:T	rs76057170	C	T	C	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr22	30782588	30782589	chr22:30782589:T:C	rs136303	T	C	C	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr22	31053249	31053250	chr22:31053250:G:T	rs76627409	G	T	G	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr22	31076517	31076518	chr22:31076518:A:G	rs9619167	A	G	a	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr22	31370443	31370444	chr22:31370444:T:C	rs138349441	T	C	T	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr22	31497110	31497111	chr22:31497111:G:A	rs185093602	G	A	G	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr22	31497141	31497142	chr22:31497142:C:T	rs78159348	C	T	C	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr22	31535679	31535680	chr22:31535680:G:C	rs11089515	G	C	G	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr22	31929595	31929596	chr22:31929596:A:G	rs4820999	A	G	A	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr22	31952853	31952854	chr22:31952854:C:T	rs117001013	C	T	C	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr22	31967656	31967657	chr22:31967657:A:G	rs62240590	A	G	A	Hoxd9.mouse_homeodomain_1	6	1	+	7.522691831404475	0.8188658848127437	CCCATAAAG
chr22	31987431	31987432	chr22:31987432:T:G	rs74534759	T	G	G	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr22	32050914	32050915	chr22:32050915:C:G	chr22:32050915:C:G	C	G	C	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr22	32050919	32050920	chr22:32050920:G:A	rs1460828912	G	A	G	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr22	32050933	32050934	chr22:32050934:G:T	rs77319954	G	T	G	Hoxd9.mouse_homeodomain_1	2	1	-	8.027213970992095	7.325658112105286	CACATAAAA
chr22	32138365	32138366	chr22:32138366:T:G	rs5998249	T	G	G	Hoxd9.mouse_homeodomain_1	4	1	+	6.876920192413827	0.03510174508322228	CCCATTAAC
chr22	32138383	32138384	chr22:32138384:G:A	rs8142970	G	A	A	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr22	32173784	32173785	chr22:32173785:C:T	rs5998281	C	T	c	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr22	32324451	32324452	chr22:32324452:A:G	rs5998412	A	G	g	Hoxd9.mouse_homeodomain_1	4	1	-	7.889898683853121	5.234852038990543	ACCATAAAA
chr22	32327601	32327602	chr22:32327602:G:A	rs73881635	G	A	g	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr22	32338804	32338805	chr22:32338805:G:A	rs62239307	G	A	g	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr22	32367004	32367005	chr22:32367005:A:G	rs28625291	A	G	g	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr22	32567059	32567060	chr22:32567060:G:A	rs9609597	G	A	G	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr22	32725343	32725344	chr22:32725344:A:T	rs12484015	A	T	A	Hoxd9.mouse_homeodomain_1	8	1	+	8.678783717710262	5.746270592944195	GCCATAAAA
chr22	32727839	32727840	chr22:32727840:A:G	rs5994613	A	G	G	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr22	32761305	32761306	chr22:32761306:G:T	rs9609622	G	T	T	Hoxd9.mouse_homeodomain_1	0	1	-	7.674217025556723	6.575096769520114	CTCATAAAA
chr22	33014822	33014823	chr22:33014823:C:T	rs145803940	C	T	C	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr22	33131375	33131376	chr22:33131376:C:A	rs137342	C	A	C	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr22	33272050	33272051	chr22:33272051:C:T	rs56757768	C	T	c	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr22	33272062	33272063	chr22:33272063:T:C	rs60726104	T	C	T	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr22	33519468	33519469	chr22:33519469:G:A	rs11704017	G	A	G	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr22	33598079	33598080	chr22:33598080:C:T	rs138091750	C	T	C	Hoxd9.mouse_homeodomain_1	1	1	+	7.091711387329735	5.776909472996728	CCCATCAAA
chr22	33713018	33713019	chr22:33713019:G:A	rs4821176	G	A	A	Hoxd9.mouse_homeodomain_1	0	1	-	7.522691831404475	5.628144526095533	CCCATAAAG
chr22	33875700	33875701	chr22:33875701:C:A	rs73154546	C	A	C	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr22	33893126	33893127	chr22:33893127:C:A	rs738989	C	A	C	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr22	34120744	34120745	chr22:34120745:T:G	rs115399103	T	G	T	Hoxd9.mouse_homeodomain_1	8	1	-	7.716978748812629	6.184411123470229	GACATAAAA
chr22	34493523	34493524	chr22:34493524:G:A	rs130700	G	A	G	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr22	34535908	34535909	chr22:34535909:T:C	rs141266299	T	C	T	Hoxd9.mouse_homeodomain_1	5	1	-	7.241935125048919	0.867745406802363	CCCATACAA
chr22	34709936	34709937	chr22:34709937:A:G	rs5749938	A	G	G	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr22	34759964	34759965	chr22:34759965:T:G	rs79007422	T	G	T	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr22	34804959	34804960	chr22:34804960:C:A	rs73164180	C	A	C	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr22	34944113	34944114	chr22:34944114:C:A	rs2017041	C	A	A	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr22	35016842	35016843	chr22:35016843:T:C	rs2008519	T	C	T	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr22	35134838	35134839	chr22:35134839:C:T	rs947298209	C	T	C	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr22	35172678	35172679	chr22:35172679:C:T	rs7291553	C	T	C	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr22	35444672	35444673	chr22:35444673:G:A	rs28450480	G	A	A	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr22	35452346	35452347	chr22:35452347:C:T	rs28486368	C	T	T	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr22	35537755	35537756	chr22:35537756:C:T	rs9619553	C	T	T	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr22	35555018	35555019	chr22:35555019:T:C	rs5995118	T	C	C	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr22	35643010	35643011	chr22:35643011:A:G	rs5999906	A	G	G	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr22	36052988	36052989	chr22:36052989:G:A	rs73417750	G	A	G	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr22	36156797	36156798	chr22:36156798:C:T	rs569412737	C	T	C	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr22	36158527	36158528	chr22:36158528:C:G	rs548570604	C	G	C	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr22	36158539	36158540	chr22:36158540:C:T	rs132650	C	T	C	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr22	36243928	36243929	chr22:36243929:G:A	rs2413394	G	A	G	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr22	36329622	36329623	chr22:36329623:T:A	rs138264059	T	A	T	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr22	36357757	36357758	chr22:36357758:C:T	rs117283436	C	T	C	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr22	36363589	36363590	chr22:36363590:T:C	rs143005031	T	C	T	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr22	36675486	36675487	chr22:36675487:T:C	rs16997155	T	C	T	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr22	36675501	36675502	chr22:36675502:G:A	rs114916774	G	A	G	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr22	36715515	36715516	chr22:36715516:C:G	rs5750292	C	G	G	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr22	37105316	37105317	chr22:37105317:A:G	rs116273559	A	G	A	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr22	37462058	37462059	chr22:37462059:C:T	rs5756685	C	T	T	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr22	37512302	37512303	chr22:37512303:T:G	chr22:37512303:T:G	T	G	T	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr22	37565083	37565084	chr22:37565084:G:A	rs62235032	G	A	G	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr22	37565112	37565113	chr22:37565113:G:A	rs8139004	G	A	A	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr22	37808298	37808299	chr22:37808299:G:T	rs906458067	G	T	g	Hoxd9.mouse_homeodomain_1	1	1	-	7.212456609225008	6.250651640327374	GCCATAAAG
chr22	37848208	37848209	chr22:37848209:C:T	rs4821721	C	T	T	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr22	37943736	37943737	chr22:37943737:G:A	rs140720586	G	A	g	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr22	37990625	37990626	chr22:37990626:C:T	rs370530775	C	T	C	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr22	38181015	38181016	chr22:38181016:G:A	rs375441646	G	A	G	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr22	38181034	38181035	chr22:38181035:G:A	rs973543662	G	A	G	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr22	38415276	38415277	chr22:38415277:C:T	rs885867	C	T	C	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr22	38540809	38540810	chr22:38540810:T:C	rs540875316	T	C	T	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr22	38701409	38701410	chr22:38701410:T:G	rs79157581	T	G	t	Hoxd9.mouse_homeodomain_1	3	1	-	8.027213970992095	1.4517058667886147	CACATAAAA
chr22	38787877	38787878	chr22:38787878:C:A	rs7290947	C	A	C	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr22	38891153	38891154	chr22:38891154:G:A	rs132506	G	A	G	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr22	38943774	38943775	chr22:38943775:C:T	rs17000548	C	T	C	Hoxd9.mouse_homeodomain_1	2	1	+	7.654940340027237	1.1674998824035994	CCCGTAAAA
chr22	39003732	39003733	chr22:39003733:T:C	rs4315626	T	C	N	Hoxd9.mouse_homeodomain_1	8	1	-	8.98901893988973	7.522691831404475	CCCATAAAA
chr22	39102032	39102033	chr22:39102033:G:C	rs139302	G	C	G	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr22	39533204	39533205	chr22:39533205:A:T	rs79349506	A	T	A	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr22	39800945	39800946	chr22:39800946:A:G	rs11703943	A	G	A	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr22	40010457	40010458	chr22:40010458:A:G	rs55916464	A	G	A	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr22	40204541	40204542	chr22:40204542:G:A	rs116381407	G	A	G	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr22	40480229	40480230	chr22:40480230:T:C	rs6001930	T	C	C	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr22	40520377	40520378	chr22:40520378:G:C	rs5757979	G	C	C	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr22	40568007	40568008	chr22:40568008:G:C	rs9619878	G	C	G	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr22	40742770	40742771	chr22:40742771:C:A	rs9611405	C	A	C	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr22	40748469	40748470	chr22:40748470:T:C	rs9611410	T	C	C	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr22	40805569	40805570	chr22:40805570:A:C	rs73172881	A	C	A	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr22	40853599	40853600	chr22:40853600:A:C	rs150690387	A	C	A	Hoxd9.mouse_homeodomain_1	7	1	+	8.027213970992095	5.137798200961511	CACATAAAA
chr22	40855660	40855661	chr22:40855661:A:G	chr22:40855661:A:G	A	G	A	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr22	40864132	40864133	chr22:40864133:G:C	rs146070366	G	C	G	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr22	40952713	40952714	chr22:40952714:T:A	rs113744478	T	A	T	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr22	41030134	41030135	chr22:41030135:G:A	rs9611465	G	A	G	Hoxd9.mouse_homeodomain_1	2	1	-	8.099252595576761	1.6118121379531245	GCCATTAAA
chr22	41077303	41077304	chr22:41077304:A:G	rs9611491	A	G	A	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr22	41128935	41128936	chr22:41128936:C:T	rs9623332	C	T	T	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr22	41569287	41569288	chr22:41569288:A:G	rs5996037	A	G	A	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr22	41569295	41569296	chr22:41569296:T:C	rs5996038	T	C	T	Hoxd9.mouse_homeodomain_1	4	1	+	7.889898683853121	5.234852038990543	ACCATAAAA
chr22	41909578	41909579	chr22:41909579:G:A	rs6002532	G	A	G	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr22	41948403	41948404	chr22:41948404:A:G	rs5996092	A	G	G	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr22	41966646	41966647	chr22:41966647:G:C	rs75674686	G	C	G	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr22	42002190	42002191	chr22:42002191:T:C	rs11090066	T	C	T	Hoxd9.mouse_homeodomain_1	6	1	-	7.522691831404475	0.8188658848127437	CCCATAAAG
chr22	42067361	42067362	chr22:42067362:C:T	rs133367	C	T	C	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr22	42076232	42076233	chr22:42076233:A:C	rs2413667	A	C	A	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr22	42079152	42079153	chr22:42079153:C:T	rs80060478	C	T	C	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr22	42117256	42117257	chr22:42117257:C:T	rs2413672	C	T	C	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr22	42157575	42157576	chr22:42157576:G:T	rs28507165	G	T	T	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr22	42283657	42283658	chr22:42283658:C:T	rs535137898	C	T	C	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr22	42375219	42375220	chr22:42375220:C:T	rs4822120	C	T	C	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr22	42375241	42375242	chr22:42375242:A:G	rs146272540	A	G	A	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr22	42413260	42413261	chr22:42413261:T:C	rs59697286	T	C	C	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr22	42436741	42436742	chr22:42436742:T:G	rs55896880	T	G	T	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr22	42511612	42511613	chr22:42511613:T:C	rs12485160	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.889898683853121	6.555820083990628	ACCATAAAA
chr22	42571856	42571857	chr22:42571857:G:A	rs73173080	G	A	-	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr22	42573102	42573103	chr22:42573103:G:T	rs137050	G	T	g	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr22	42573123	42573124	chr22:42573124:G:A	rs137051	G	A	a	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr22	42649565	42649566	chr22:42649566:C:A	rs73888347	C	A	C	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr22	42649586	42649587	chr22:42649587:C:T	rs8190364	C	T	C	Hoxd9.mouse_homeodomain_1	1	1	+	7.212456609225008	5.897654694892	GCCATAAAG
chr22	42699106	42699107	chr22:42699107:T:A	rs8138577	T	A	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.674217025556723	5.670735888748078	CTCATAAAA
chr22	42708743	42708744	chr22:42708744:C:T	rs13055886	C	T	T	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr22	42716811	42716812	chr22:42716812:C:A	rs1883991	C	A	A	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr22	42748047	42748048	chr22:42748048:G:C	rs2092663	G	C	G	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr22	42850139	42850140	chr22:42850140:G:A	rs6002963	G	A	A	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr22	42973032	42973033	chr22:42973033:T:G	rs1044012611	T	G	T	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr22	43015359	43015360	chr22:43015360:T:C	rs547232037	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.409487817756228	7.075409217893736	CCCATTAAA
chr22	43015373	43015374	chr22:43015374:G:A	rs559514343	G	A	G	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr22	43015379	43015380	chr22:43015380:G:C	rs187971578	G	C	G	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr22	43015382	43015383	chr22:43015383:T:C	rs2267487	T	C	T	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr22	43179089	43179090	chr22:43179090:C:T	rs7284936	C	T	C	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr22	43179122	43179123	chr22:43179123:C:T	rs112366138	C	T	C	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr22	43386120	43386121	chr22:43386121:G:A	rs114289053	G	A	G	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr22	43420211	43420212	chr22:43420212:T:G	rs974579	T	G	G	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr22	43666458	43666459	chr22:43666459:A:G	rs76851977	A	G	A	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr22	44024978	44024979	chr22:44024979:A:T	rs9941915	A	T	a	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr22	44049846	44049847	chr22:44049847:C:A	rs62226389	C	A	C	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr22	44049852	44049853	chr22:44049853:G:A	rs75582664	G	A	G	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr22	44051165	44051166	chr22:44051166:A:G	rs6006632	A	G	G	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr22	44096778	44096779	chr22:44096779:T:C	rs11703469	T	C	T	Hoxd9.mouse_homeodomain_1	7	1	-	7.9772278588234515	1.2734019122317202	GCAATAAAA
chr22	44096794	44096795	chr22:44096795:A:G	rs2299849	A	G	G	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr22	44117777	44117778	chr22:44117778:T:C	rs2267611	T	C	T	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr22	44178523	44178524	chr22:44178524:G:A	rs2092351	G	A	A	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr22	44182838	44182839	chr22:44182839:C:T	rs541407271	C	T	C	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr22	44203242	44203243	chr22:44203243:T:C	rs2064260	T	C	T	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr22	44216218	44216219	chr22:44216219:T:C	rs13055282	T	C	T	Hoxd9.mouse_homeodomain_1	7	1	-	7.091711387329735	0.38788544073800313	CCCATCAAA
chr22	44251539	44251540	chr22:44251540:G:A	rs9614222	G	A	G	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr22	44370484	44370485	chr22:44370485:G:A	rs117535808	G	A	G	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr22	44406901	44406902	chr22:44406902:G:A	rs77846003	G	A	G	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr22	44450291	44450292	chr22:44450292:A:G	rs133761	A	G	G	Hoxd9.mouse_homeodomain_1	5	1	+	7.45645131454733	1.0822615963007745	CCCATAAAC
chr22	44527195	44527196	chr22:44527196:C:A	rs12157321	C	A	C	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr22	44527199	44527200	chr22:44527200:G:A	rs4823330	G	A	G	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr22	44527201	44527202	chr22:44527202:T:C	rs4823331	T	C	T	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr22	44605401	44605402	chr22:44605402:C:T	rs16992551	C	T	C	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr22	44660925	44660926	chr22:44660926:T:C	rs117593922	T	C	T	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr22	44865328	44865329	chr22:44865329:G:C	rs2882263	G	C	G	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr22	44868502	44868503	chr22:44868503:G:A	rs5766143	G	A	G	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr22	45077818	45077819	chr22:45077819:T:C	rs6006925	T	C	C	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr22	45112364	45112365	chr22:45112365:A:C	rs7286611	A	C	C	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr22	45226469	45226470	chr22:45226470:A:G	rs5766564	A	G	G	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr22	45329224	45329225	chr22:45329225:T:C	rs6006988	T	C	T	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr22	45352931	45352932	chr22:45352932:A:C	rs6006995	A	C	A	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr22	45686095	45686096	chr22:45686096:G:A	rs16994431	G	A	G	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr22	45711197	45711198	chr22:45711198:G:C	rs138153	G	C	C	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr22	45773329	45773330	chr22:45773330:C:T	rs74792729	C	T	C	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr22	45778176	45778177	chr22:45778177:C:T	rs135991	C	T	C	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr22	45832319	45832320	chr22:45832320:C:T	rs11703479	C	T	C	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr22	45978876	45978877	chr22:45978877:T:C	rs749424335	T	C	t	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr22	46010814	46010815	chr22:46010815:A:G	rs28368435	A	G	G	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr22	46073436	46073437	chr22:46073437:G:C	rs111376467	G	C	G	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr22	46107269	46107270	chr22:46107270:C:T	rs560334730	C	T	C	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr22	46195708	46195709	chr22:46195709:G:C	rs1417514943	G	C	G	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr22	46241078	46241079	chr22:46241079:G:A	rs41378347	G	A	G	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr22	46247843	46247844	chr22:46247844:G:A	rs73177047	G	A	A	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr22	46247876	46247877	chr22:46247877:G:T	rs16995069	G	T	G	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr22	46264272	46264273	chr22:46264273:G:A	rs113959594	G	A	G	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr22	46267424	46267425	chr22:46267425:T:G	rs9627353	T	G	T	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr22	46362675	46362676	chr22:46362676:G:T	rs12172608	G	T	T	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr22	46379196	46379197	chr22:46379197:C:A	rs767809438	C	A	C	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr22	46506889	46506890	chr22:46506890:T:C	rs3788721	T	C	T	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr22	46667432	46667433	chr22:46667433:A:G	rs867212	A	G	A	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr22	46679564	46679565	chr22:46679565:C:T	rs3179	C	T	T	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr22	46743037	46743038	chr22:46743038:T:C	rs8141760	T	C	C	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr22	46764374	46764375	chr22:46764375:G:A	rs80302404	G	A	G	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr22	46858332	46858333	chr22:46858333:T:A	rs147349817	T	A	T	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr22	46910496	46910497	chr22:46910497:T:C	rs5767406	T	C	T	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr22	46972771	46972772	chr22:46972772:G:T	rs136109	G	T	G	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr22	47044873	47044874	chr22:47044874:T:C	rs140539	T	C	C	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr22	47048926	47048927	chr22:47048927:G:C	rs4486	G	C	G	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr22	47048928	47048929	chr22:47048929:G:C	rs140540	G	C	C	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr22	47049864	47049865	chr22:47049865:A:G	rs131917	A	G	A	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr22	47049876	47049877	chr22:47049877:A:G	rs131918	A	G	G	Hoxd9.mouse_homeodomain_1	7	1	+	7.654940340027237	0.9511143934355059	CCCGTAAAA
chr22	47062598	47062599	chr22:47062599:G:A	rs131927	G	A	A	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr22	47062602	47062603	chr22:47062603:C:T	rs131928	C	T	C	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr22	47111468	47111469	chr22:47111469:G:A	rs77248207	G	A	G	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr22	47268843	47268844	chr22:47268844:G:T	rs136646	G	T	T	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr22	47315745	47315746	chr22:47315746:C:A	rs9615149	C	A	C	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr22	47377076	47377077	chr22:47377077:C:T	rs145681055	C	T	C	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr22	47377113	47377114	chr22:47377114:G:A	rs9627013	G	A	G	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr22	47548046	47548047	chr22:47548047:G:C	rs78024662	G	C	G	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr22	47548078	47548079	chr22:47548079:G:C	rs62225387	G	C	G	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr22	47561110	47561111	chr22:47561111:A:T	rs4552288	A	T	T	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr22	47561139	47561140	chr22:47561140:G:A	rs17668240	G	A	G	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr22	47574436	47574437	chr22:47574437:G:C	rs5767812	G	C	C	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr22	47610769	47610770	chr22:47610770:G:A	rs5767831	G	A	A	Hoxd9.mouse_homeodomain_1	8	1	-	6.876920192413827	5.47697469299016	CCCATTAAC
chr22	47666834	47666835	chr22:47666835:C:A	rs16997322	C	A	C	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr22	47767544	47767545	chr22:47767545:C:T	rs16997544	C	T	C	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr22	47795990	47795991	chr22:47795991:G:T	rs116256781	G	T	G	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr22	47899667	47899668	chr22:47899668:A:C	rs738733	A	C	A	Hoxd9.mouse_homeodomain_1	8	1	+	8.98901893988973	7.45645131454733	CCCATAAAA
chr22	47908366	47908367	chr22:47908367:G:A	rs8141800	G	A	G	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr22	48025171	48025172	chr22:48025172:A:G	rs9615257	A	G	A	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr22	48113283	48113284	chr22:48113284:C:T	rs79653975	C	T	C	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr22	48239687	48239688	chr22:48239688:T:C	rs73477778	T	C	C	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr22	48244390	48244391	chr22:48244391:G:A	rs5768471	G	A	G	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr22	48262959	48262960	chr22:48262960:T:A	rs119589	T	A	A	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr22	48286732	48286733	chr22:48286733:G:C	rs58728207	G	C	g	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr22	48286751	48286752	chr22:48286752:A:G	rs12628852	A	G	G	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr22	48302442	48302443	chr22:48302443:C:A	rs133622	C	A	C	Hoxd9.mouse_homeodomain_1	0	1	+	7.707931958869418	6.608811702832808	CCAATTAAA
chr22	48456750	48456751	chr22:48456751:C:T	rs8137943	C	T	C	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr22	48456774	48456775	chr22:48456775:C:T	rs12169429	C	T	C	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr22	48580914	48580915	chr22:48580915:G:A	rs28537632	G	A	G	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr22	48665766	48665767	chr22:48665767:G:A	rs11204495	G	A	G	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr22	48723379	48723380	chr22:48723380:C:A	rs130195	C	A	C	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr22	48846012	48846013	chr22:48846013:C:G	rs4073896	C	G	-	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr22	48856174	48856175	chr22:48856175:A:G	rs139881192	A	G	A	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr22	48883336	48883337	chr22:48883337:G:A	rs3935258	G	A	G	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr22	48883350	48883351	chr22:48883351:C:T	rs575728157	C	T	C	Hoxd9.mouse_homeodomain_1	3	1	-	7.075409217893736	8.409487817756228	CCCGTTAAA
chr22	48906174	48906175	chr22:48906175:C:T	rs736697	C	T	C	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr22	48961735	48961736	chr22:48961736:G:C	rs5770529	G	C	C	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr22	49008236	49008237	chr22:49008237:A:G	rs4823966	A	G	G	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr22	49020250	49020251	chr22:49020251:C:T	rs4823969	C	T	C	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr22	49070189	49070190	chr22:49070190:A:C	rs17766118	A	C	A	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr22	49438481	49438482	chr22:49438482:G:T	rs6009256	G	T	G	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr22	49447762	49447763	chr22:49447763:C:A	rs8139967	C	A	C	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr22	49453583	49453584	chr22:49453584:A:G	rs151127281	A	G	A	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr22	49453589	49453590	chr22:49453590:C:T	rs713826	C	T	T	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr22	49507985	49507986	chr22:49507986:C:T	rs12157698	C	T	C	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr22	49508010	49508011	chr22:49508011:C:T	rs11090975	C	T	T	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr22	49584755	49584756	chr22:49584756:A:G	rs114873547	A	G	A	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr22	49666628	49666629	chr22:49666629:A:C	rs117219353	A	C	A	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr22	49851286	49851287	chr22:49851287:A:G	rs12330122	A	G	A	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr22	49933222	49933223	chr22:49933223:G:A	rs62234025	G	A	G	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr22	49933233	49933234	chr22:49933234:A:G	rs62234026	A	G	G	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr22	50001000	50001001	chr22:50001001:A:G	rs137845	A	G	G	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr22	50063200	50063201	chr22:50063201:G:T	rs3817812	G	T	G	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr22	50066891	50066892	chr22:50066892:G:C	rs9617142	G	C	G	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr22	50131237	50131238	chr22:50131238:A:G	rs2340599	A	G	A	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr22	50139956	50139957	chr22:50139957:G:A	rs9617040	G	A	G	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr22	50178376	50178377	chr22:50178377:A:G	rs5771206	A	G	G	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr22	50261917	50261918	chr22:50261918:G:C	rs11913279	G	C	G	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr22	50387906	50387907	chr22:50387907:C:T	rs8142016	C	T	T	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr22	50387907	50387908	chr22:50387908:G:A	rs76201378	G	A	G	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr22	50508766	50508767	chr22:50508767:T:C	rs45529631	T	C	T	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr22	50539935	50539936	chr22:50539936:G:A	chr22:50539936:G:A	G	A	G	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr22	50568286	50568287	chr22:50568287:G:A	rs2334104	G	A	G	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr22	50575342	50575343	chr22:50575343:A:G	rs5770913	A	G	G	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr3	11914	11915	chr3:11915:G:C	rs1311016786	G	C	.	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr3	11918	11919	chr3:11919:C:A	rs1407981181	C	A	.	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr3	93944	93945	chr3:93945:G:A	rs534373055	G	A	G	Hoxd9.mouse_homeodomain_1	0	1	-	7.075409217893736	5.180861912584794	CCCGTTAAA
chr3	196175	196176	chr3:196176:A:G	rs34477413	A	G	A	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr3	249113	249114	chr3:249114:C:T	rs77102144	C	T	C	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr3	377623	377624	chr3:377624:A:C	rs76659358	A	C	A	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr3	856499	856500	chr3:856500:A:G	rs11131128	A	G	G	Hoxd9.mouse_homeodomain_1	5	1	+	7.9772278588234515	1.603038140576896	GCAATAAAA
chr3	952825	952826	chr3:952826:C:A	rs4577456	C	A	C	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr3	1072009	1072010	chr3:1072010:G:A	rs12630055	G	A	G	Hoxd9.mouse_homeodomain_1	0	1	+	7.9772278588234515	7.188342824966311	GCAATAAAA
chr3	1125705	1125706	chr3:1125706:T:C	rs1394182	T	C	T	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr3	1288268	1288269	chr3:1288269:A:G	rs17037184	A	G	a	Hoxd9.mouse_homeodomain_1	3	1	+	8.287463081002919	6.953384481140425	CCAATAAAA
chr3	1497415	1497416	chr3:1497416:T:C	rs9877637	T	C	T	Hoxd9.mouse_homeodomain_1	0	1	-	7.889898683853121	8.678783717710262	ACCATAAAA
chr3	1527735	1527736	chr3:1527736:T:G	rs73001630	T	G	G	Hoxd9.mouse_homeodomain_1	4	1	+	7.9772278588234515	1.1354094114928457	GCAATAAAA
chr3	1578013	1578014	chr3:1578014:T:C	rs2128253	T	C	T	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr3	1616935	1616936	chr3:1616936:A:T	rs7610855	A	T	A	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr3	1728636	1728637	chr3:1728637:T:C	rs17043113	T	C	C	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr3	1791462	1791463	chr3:1791463:C:G	rs11707444	C	G	G	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr3	1831268	1831269	chr3:1831269:A:C	rs34442348	A	C	A	Hoxd9.mouse_homeodomain_1	6	1	+	8.98901893988973	7.241935125048919	CCCATAAAA
chr3	1843204	1843205	chr3:1843205:A:G	rs7625240	A	G	G	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr3	2003164	2003165	chr3:2003165:T:A	rs62246793	T	A	T	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr3	2111555	2111556	chr3:2111556:T:C	rs4425236	T	C	T	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr3	2372368	2372369	chr3:2372369:A:C	rs57008796	A	C	A	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr3	2534676	2534677	chr3:2534677:A:T	rs59341570	A	T	A	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr3	2578769	2578770	chr3:2578770:C:T	rs12715075	C	T	T	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr3	2597787	2597788	chr3:2597788:G:A	rs371493173	G	A	G	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr3	2615132	2615133	chr3:2615133:A:G	rs13064095	A	G	A	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr3	2640355	2640356	chr3:2640356:G:A	rs2728073	G	A	A	Hoxd9.mouse_homeodomain_1	8	1	-	7.45645131454733	6.056505815123662	CCCATAAAC
chr3	2660012	2660013	chr3:2660013:A:G	rs142877755	A	G	A	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr3	2710268	2710269	chr3:2710269:G:A	rs2675291	G	A	A	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr3	2947918	2947919	chr3:2947919:A:C	rs876254	A	C	C	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr3	2948231	2948232	chr3:2948232:A:G	rs876256	A	G	G	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr3	3303413	3303414	chr3:3303414:T:C	rs1159832	T	C	T	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr3	3517248	3517249	chr3:3517249:T:G	rs7637204	T	G	T	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr3	3562020	3562021	chr3:3562021:G:A	rs7642870	G	A	A	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr3	3808548	3808549	chr3:3808549:A:G	rs1561801	A	G	G	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr3	3821594	3821595	chr3:3821595:T:C	rs696489	T	C	T	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr3	3821634	3821635	chr3:3821635:A:G	rs696487	A	G	A	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr3	3951874	3951875	chr3:3951875:T:G	rs2596861	T	G	T	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr3	4044514	4044515	chr3:4044515:G:T	rs111302595	G	T	G	Hoxd9.mouse_homeodomain_1	1	1	-	8.678783717710262	7.716978748812629	GCCATAAAA
chr3	4195351	4195352	chr3:4195352:G:A	rs6777465	G	A	G	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr3	4752557	4752558	chr3:4752558:G:C	rs2874877	G	C	G	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr3	4835390	4835391	chr3:4835391:T:C	rs3792515	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.287463081002919	6.953384481140425	CCAATAAAA
chr3	4836252	4836253	chr3:4836253:C:G	rs4685831	C	G	G	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr3	4855996	4855997	chr3:4855997:T:C	rs4685838	T	C	C	Hoxd9.mouse_homeodomain_1	0	1	-	7.889898683853121	8.678783717710262	ACCATAAAA
chr3	4938549	4938550	chr3:4938550:C:G	rs13098433	C	G	C	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr3	4980788	4980789	chr3:4980789:G:A	rs995393302	G	A	G	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr3	4989275	4989276	chr3:4989276:C:T	rs2137947	C	T	C	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr3	5004586	5004587	chr3:5004587:C:G	rs7652633	C	G	C	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr3	5045590	5045591	chr3:5045591:A:T	rs76235468	A	T	A	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr3	5200239	5200240	chr3:5200240:G:A	rs74284148	G	A	G	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr3	5203460	5203461	chr3:5203461:T:G	rs341981	T	G	T	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr3	5256702	5256703	chr3:5256703:A:T	rs56912200	A	T	T	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr3	5265238	5265239	chr3:5265239:G:C	rs12330907	G	C	G	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr3	5315846	5315847	chr3:5315847:C:A	rs398708	C	A	C	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr3	5357688	5357689	chr3:5357689:A:G	rs62257000	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.287463081002919	6.953384481140425	CCAATAAAA
chr3	5499358	5499359	chr3:5499359:A:T	rs1367130	A	T	T	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr3	5568657	5568658	chr3:5568658:C:T	rs6775123	C	T	T	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr3	5891007	5891008	chr3:5891008:C:G	rs892823	C	G	C	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr3	6079117	6079118	chr3:6079118:C:A	rs994455674	C	A	C	Hoxd9.mouse_homeodomain_1	2	1	+	7.241935125048919	6.540379266162109	CCCATACAA
chr3	6290320	6290321	chr3:6290321:G:T	rs114141320	G	T	G	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr3	6340416	6340417	chr3:6340417:T:G	rs4686044	T	G	T	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr3	6340444	6340445	chr3:6340445:A:G	rs4686045	A	G	-	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr3	6564878	6564879	chr3:6564879:A:G	rs56247305	A	G	G	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr3	6631418	6631419	chr3:6631419:G:A	rs6783622	G	A	A	Hoxd9.mouse_homeodomain_1	3	1	+	7.34470511784777	8.678783717710262	GCCGTAAAA
chr3	6936312	6936313	chr3:6936313:A:C	rs62235413	A	C	A	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr3	6955051	6955052	chr3:6955052:A:G	rs116702229	A	G	A	Hoxd9.mouse_homeodomain_1	5	1	+	8.98901893988973	2.6148292216431743	CCCATAAAA
chr3	7478396	7478397	chr3:7478397:C:T	rs752300	C	T	C	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr3	7798393	7798394	chr3:7798394:C:T	rs114187208	C	T	A	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr3	7798394	7798395	chr3:7798395:G:A	rs9828179	G	A	G	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr3	7798413	7798414	chr3:7798414:T:G	rs9815260	T	G	T	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr3	7811971	7811972	chr3:7811972:G:T	rs161894	G	T	g	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr3	7956265	7956266	chr3:7956266:T:C	rs10510382	T	C	T	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr3	8324807	8324808	chr3:8324808:T:A	rs9824131	T	A	T	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr3	8536828	8536829	chr3:8536829:T:A	rs866728365	T	A	t	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr3	8577183	8577184	chr3:8577184:A:T	rs165175	A	T	A	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr3	8682834	8682835	chr3:8682835:G:A	rs114018603	G	A	G	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr3	8932814	8932815	chr3:8932815:T:C	rs45617043	T	C	T	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr3	9111921	9111922	chr3:9111922:A:C	rs421915	A	C	A	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr3	9204959	9204960	chr3:9204960:T:C	rs55764079	T	C	T	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr3	9396375	9396376	chr3:9396376:G:A	rs2600182	G	A	G	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr3	9396377	9396378	chr3:9396378:G:A	chr3:9396378:G:A	G	A	G	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr3	9396377	9396378	chr3:9396378:G:T	rs115958927	G	T	G	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr3	9649937	9649938	chr3:9649938:G:A	rs184415653	G	A	G	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr3	9792301	9792302	chr3:9792302:C:T	rs293778	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	-	8.099252595576761	7.3103675617196195	GCCATTAAA
chr3	9862866	9862867	chr3:9862867:T:G	chr3:9862867:T:G	T	G	T	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr3	9862872	9862873	chr3:9862873:C:A	rs147460040	C	A	C	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr3	9862899	9862900	chr3:9862900:C:T	rs1311864204	C	T	C	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr3	9878356	9878357	chr3:9878357:A:T	rs56111543	A	T	A	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr3	10192483	10192484	chr3:10192484:C:G	rs155584	C	G	G	Hoxd9.mouse_homeodomain_1	1	1	+	7.1462160923678635	0.7366828635854974	GCCATAAAC
chr3	10192486	10192487	chr3:10192487:T:C	chr3:10192487:T:C	T	C	T	Hoxd9.mouse_homeodomain_1	4	1	+	7.1462160923678635	4.491169447505284	GCCATAAAC
chr3	10199060	10199061	chr3:10199061:G:A	rs73026543	G	A	G	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr3	10447762	10447763	chr3:10447763:C:T	rs149619381	C	T	C	Hoxd9.mouse_homeodomain_1	3	1	-	7.34470511784777	8.678783717710262	GCCGTAAAA
chr3	10471671	10471672	chr3:10471672:G:A	rs73020751	G	A	G	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr3	10652966	10652967	chr3:10652967:C:T	rs6785439	C	T	T	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr3	10654338	10654339	chr3:10654339:C:T	rs62240225	C	T	C	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr3	10654350	10654351	chr3:10654351:C:A	rs11128522	C	A	C	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr3	10670362	10670363	chr3:10670363:T:A	rs6442197	T	A	A	Hoxd9.mouse_homeodomain_1	6	1	-	7.075409217893736	4.185993447863149	CCCGTTAAA
chr3	10957807	10957808	chr3:10957808:T:G	rs4610207	T	G	T	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr3	11191850	11191851	chr3:11191851:C:A	rs347630	C	A	C	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr3	11231245	11231246	chr3:11231246:G:T	rs346086	G	T	T	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr3	11396076	11396077	chr3:11396077:A:G	rs4684070	A	G	G	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr3	11452580	11452581	chr3:11452581:C:T	rs113786112	C	T	C	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr3	11547514	11547515	chr3:11547515:A:G	rs2437686	A	G	G	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr3	11692059	11692060	chr3:11692060:T:A	rs904312	T	A	T	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr3	11749235	11749236	chr3:11749236:G:A	rs301554	G	A	A	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr3	11770293	11770294	chr3:11770294:C:T	rs34512653	C	T	C	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr3	12005029	12005030	chr3:12005030:A:G	rs2623880	A	G	A	Hoxd9.mouse_homeodomain_1	5	1	+	8.287463081002919	1.9132733627563638	CCAATAAAA
chr3	12007962	12007963	chr3:12007963:T:A	rs2618387	T	A	A	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr3	12191981	12191982	chr3:12191982:A:G	rs310766	A	G	A	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr3	12233175	12233176	chr3:12233176:T:C	rs59101559	T	C	T	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr3	12237652	12237653	chr3:12237653:G:A	rs111536786	G	A	G	Hoxd9.mouse_homeodomain_1	1	1	-	7.091711387329735	5.776909472996728	CCCATCAAA
chr3	12426113	12426114	chr3:12426114:A:G	rs4135356	A	G	A	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr3	12445481	12445482	chr3:12445482:C:T	rs76848853	C	T	C	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr3	12542899	12542900	chr3:12542900:A:G	rs2454432	A	G	A	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr3	12560441	12560442	chr3:12560442:G:A	rs2596820	G	A	A	Hoxd9.mouse_homeodomain_1	3	1	+	7.34470511784777	8.678783717710262	GCCGTAAAA
chr3	12696953	12696954	chr3:12696954:C:G	rs13081061	C	G	C	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr3	12706415	12706416	chr3:12706416:A:G	rs9811396	A	G	G	Hoxd9.mouse_homeodomain_1	4	1	-	8.98901893988973	6.333972295027152	CCCATAAAA
chr3	12751661	12751662	chr3:12751662:G:A	rs114423776	G	A	G	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr3	12780647	12780648	chr3:12780648:T:G	rs6763619	T	G	T	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr3	12791579	12791580	chr3:12791580:C:G	rs9874893	C	G	C	Hoxd9.mouse_homeodomain_1	5	1	+	7.091711387329735	2.6148292216431743	CCCATCAAA
chr3	12871265	12871266	chr3:12871266:T:C	rs17612927	T	C	T	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr3	12892037	12892038	chr3:12892038:A:C	rs910931525	A	C	A	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr3	13326953	13326954	chr3:13326954:A:G	rs74858247	A	G	A	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr3	13598212	13598213	chr3:13598213:T:A	rs3773274	T	A	A	Hoxd9.mouse_homeodomain_1	6	1	-	8.027213970992095	5.137798200961511	CACATAAAA
chr3	13669061	13669062	chr3:13669062:G:T	rs3934833	G	T	G	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr3	13753479	13753480	chr3:13753480:G:T	rs4685010	G	T	G	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr3	13793509	13793510	chr3:13793510:C:T	rs13082214	C	T	C	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr3	13857120	13857121	chr3:13857121:C:T	rs9819887	C	T	C	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr3	13950363	13950364	chr3:13950364:A:G	rs11707778	A	G	A	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr3	14235559	14235560	chr3:14235560:A:C	rs55691578	A	C	C	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr3	14530276	14530277	chr3:14530277:G:A	rs4685186	G	A	A	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr3	14690544	14690545	chr3:14690545:T:A	rs6442470	T	A	A	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr3	14731951	14731952	chr3:14731952:A:G	chr3:14731952:A:G	A	G	a	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr3	14846038	14846039	chr3:14846039:A:G	rs1687324	A	G	G	Hoxd9.mouse_homeodomain_1	8	1	+	7.716978748812629	6.250651640327374	GACATAAAA
chr3	14850994	14850995	chr3:14850995:A:G	rs17040381	A	G	A	Hoxd9.mouse_homeodomain_1	8	1	+	7.716978748812629	6.250651640327374	GACATAAAA
chr3	15182834	15182835	chr3:15182835:C:A	rs2077619	C	A	A	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr3	15471958	15471959	chr3:15471959:C:T	rs77240381	C	T	C	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr3	15782802	15782803	chr3:15782803:C:A	rs56394036	C	A	C	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr3	15792395	15792396	chr3:15792396:C:G	rs6762442	C	G	G	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr3	16048881	16048882	chr3:16048882:G:A	rs557595333	G	A	G	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr3	16143390	16143391	chr3:16143391:G:A	rs884723	G	A	G	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr3	16239674	16239675	chr3:16239675:T:C	rs76651017	T	C	T	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr3	16278221	16278222	chr3:16278222:A:G	rs6792868	A	G	A	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr3	16378564	16378565	chr3:16378565:A:G	rs34151744	A	G	A	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr3	16455087	16455088	chr3:16455088:C:A	rs377749095	C	A	C	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr3	16475265	16475266	chr3:16475266:T:C	rs1429160	T	C	T	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr3	16487854	16487855	chr3:16487855:C:G	rs113075095	C	G	C	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr3	16528204	16528205	chr3:16528205:T:C	rs34600445	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.027213970992095	6.693135371129603	CACATAAAA
chr3	16565328	16565329	chr3:16565329:A:C	rs17042414	A	C	A	Hoxd9.mouse_homeodomain_1	6	1	+	8.099252595576761	6.3521687807359495	GCCATTAAA
chr3	16587813	16587814	chr3:16587814:A:T	rs2059743	A	T	T	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr3	16666060	16666061	chr3:16666061:C:T	rs1544917	C	T	C	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr3	16797421	16797422	chr3:16797422:G:T	rs79720989	G	T	T	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr3	16886468	16886469	chr3:16886469:C:A	rs573969188	C	A	C	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr3	17047631	17047632	chr3:17047632:G:C	rs78403145	G	C	G	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr3	17152578	17152579	chr3:17152579:G:A	rs13062346	G	A	G	Hoxd9.mouse_homeodomain_1	1	1	-	7.45645131454733	6.141649400214323	CCCATAAAC
chr3	17166774	17166775	chr3:17166775:T:C	rs1138454	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.099252595576761	6.765173995714267	GCCATTAAA
chr3	17779743	17779744	chr3:17779744:T:C	rs114400226	T	C	T	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr3	18208480	18208481	chr3:18208481:T:C	rs6779035	T	C	C	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr3	18239953	18239954	chr3:18239954:T:C	rs67878364	T	C	T	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr3	18490968	18490969	chr3:18490969:T:C	rs965562	T	C	C	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr3	18716926	18716927	chr3:18716927:A:G	rs13098781	A	G	G	Hoxd9.mouse_homeodomain_1	5	1	+	8.287463081002919	1.9132733627563638	CCAATAAAA
chr3	19002235	19002236	chr3:19002236:G:A	rs9863583	G	A	A	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr3	19539545	19539546	chr3:19539546:C:T	rs116048016	C	T	C	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr3	19776016	19776017	chr3:19776017:G:C	rs1506094	G	C	G	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr3	20146581	20146582	chr3:20146582:C:T	rs2686314	C	T	T	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr3	20186439	20186440	chr3:20186440:A:T	rs182809411	A	T	.	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr3	20330308	20330309	chr3:20330309:A:C	rs7620101	A	C	A	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr3	20330314	20330315	chr3:20330315:A:T	rs7620103	A	T	T	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr3	21180103	21180104	chr3:21180104:G:T	rs7626021	G	T	G	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr3	21394235	21394236	chr3:21394236:C:T	rs79514645	C	T	C	Hoxd9.mouse_homeodomain_1	3	1	-	7.075409217893736	8.409487817756228	CCCGTTAAA
chr3	21447859	21447860	chr3:21447860:A:G	rs13096294	A	G	A	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr3	21473453	21473454	chr3:21473454:T:C	rs17273537	T	C	T	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr3	21473498	21473499	chr3:21473499:T:C	rs141370836	T	C	T	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr3	21520531	21520532	chr3:21520532:T:C	rs73134904	T	C	T	Hoxd9.mouse_homeodomain_1	5	1	-	8.678783717710262	2.304593999463707	GCCATAAAA
chr3	21528546	21528547	chr3:21528547:T:G	rs233151	T	G	T	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr3	21528556	21528557	chr3:21528557:T:C	rs233150	T	C	C	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr3	21628119	21628120	chr3:21628120:C:G	chr3:21628120:C:G	C	G	C	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr3	21697824	21697825	chr3:21697825:C:T	rs1602241	C	T	C	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr3	21755223	21755224	chr3:21755224:A:T	rs62236199	A	T	A	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr3	21839669	21839670	chr3:21839670:A:G	rs2670277	A	G	G	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr3	21877834	21877835	chr3:21877835:T:C	rs779035	T	C	C	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr3	22160750	22160751	chr3:22160751:A:G	rs35780386	A	G	A	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr3	22170864	22170865	chr3:22170865:A:C	rs2035850	A	C	A	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr3	22392501	22392502	chr3:22392502:C:T	rs2060663	C	T	t	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr3	22548204	22548205	chr3:22548205:A:G	rs77893626	A	G	A	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr3	22980385	22980386	chr3:22980386:T:C	rs79184754	T	C	T	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr3	23113673	23113674	chr3:23113674:G:C	rs4858477	G	C	G	Hoxd9.mouse_homeodomain_1	0	1	-	7.522691831404475	7.212456609225008	CCCATAAAG
chr3	23162532	23162533	chr3:23162533:T:C	rs9812056	T	C	T	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr3	23170105	23170106	chr3:23170106:T:A	rs73050257	T	A	T	Hoxd9.mouse_homeodomain_1	4	1	+	8.287463081002919	1.445644633672313	CCAATAAAA
chr3	23252257	23252258	chr3:23252258:A:G	rs34259979	A	G	A	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr3	23325529	23325530	chr3:23325530:A:T	rs7610971	A	T	A	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr3	23404417	23404418	chr3:23404418:A:G	rs778459	A	G	G	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr3	23405539	23405540	chr3:23405540:A:G	rs1695205	A	G	A	Hoxd9.mouse_homeodomain_1	6	1	+	8.98901893988973	2.285192993297999	CCCATAAAA
chr3	23590742	23590743	chr3:23590743:T:C	rs7631705	T	C	T	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr3	23811801	23811802	chr3:23811802:T:C	rs4858547	T	C	T	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr3	23811830	23811831	chr3:23811831:C:T	rs72625889	C	T	C	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr3	24185683	24185684	chr3:24185684:G:A	rs12639293	G	A	A	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr3	24200141	24200142	chr3:24200142:C:T	rs55888013	C	T	C	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr3	24202090	24202091	chr3:24202091:G:A	rs62253677	G	A	G	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr3	24601128	24601129	chr3:24601129:G:A	rs116755504	G	A	G	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr3	24601131	24601132	chr3:24601132:A:G	rs1561078	A	G	A	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr3	24615286	24615287	chr3:24615287:T:G	rs10490833	T	G	T	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr3	24628467	24628468	chr3:24628468:A:C	rs2362758	A	C	C	Hoxd9.mouse_homeodomain_1	4	1	-	7.9772278588234515	1.1354094114928457	GCAATAAAA
chr3	24707096	24707097	chr3:24707097:T:C	rs4505632	T	C	C	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr3	24884103	24884104	chr3:24884104:T:G	rs2885597	T	G	G	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr3	25056346	25056347	chr3:25056347:T:C	rs4858695	T	C	T	Hoxd9.mouse_homeodomain_1	4	1	+	7.9772278588234515	5.3221812139608735	GCAATAAAA
chr3	25068923	25068924	chr3:25068924:T:A	rs7619139	T	A	T	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr3	25287639	25287640	chr3:25287640:A:C	rs2885837	A	C	A	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr3	25335461	25335462	chr3:25335462:A:C	rs145058358	A	C	A	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr3	25387799	25387800	chr3:25387800:T:C	rs11714772	T	C	C	Hoxd9.mouse_homeodomain_1	7	1	-	7.716978748812629	1.0131528022208975	GACATAAAA
chr3	25455182	25455183	chr3:25455183:A:G	rs957950	A	G	A	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr3	25499879	25499880	chr3:25499880:A:G	rs1406575	A	G	A	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr3	26418559	26418560	chr3:26418560:T:C	rs955703	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.091711387329735	5.757632787467242	CCCATCAAA
chr3	26630844	26630845	chr3:26630845:T:C	rs6774481	T	C	T	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr3	26652323	26652324	chr3:26652324:T:A	rs923281471	T	A	T	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr3	26920651	26920652	chr3:26920652:A:G	rs73141856	A	G	A	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr3	27102035	27102036	chr3:27102036:A:G	rs11129263	A	G	A	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr3	27115668	27115669	chr3:27115669:A:G	rs1522140	A	G	A	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr3	27467588	27467589	chr3:27467589:A:G	rs17019809	A	G	A	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr3	27591404	27591405	chr3:27591405:C:G	rs2642909	C	G	G	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr3	27677227	27677228	chr3:27677228:A:G	rs2371070	A	G	G	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr3	27955430	27955431	chr3:27955431:C:T	rs453026	C	T	c	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr3	28018964	28018965	chr3:28018965:C:T	rs433317	C	T	C	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr3	28249451	28249452	chr3:28249452:A:G	rs12498078	A	G	A	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr3	28350133	28350134	chr3:28350134:A:C	rs7649498	A	C	C	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr3	28352865	28352866	chr3:28352866:A:T	rs9968098	A	T	A	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr3	28678198	28678199	chr3:28678199:C:T	rs79674000	C	T	C	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr3	28678234	28678235	chr3:28678235:G:C	rs4680703	G	C	G	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr3	28879216	28879217	chr3:28879217:A:G	rs6802332	A	G	A	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr3	28882390	28882391	chr3:28882391:T:C	rs1500009	T	C	C	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr3	28922886	28922887	chr3:28922887:A:G	rs74638278	A	G	A	Hoxd9.mouse_homeodomain_1	4	1	-	8.98901893988973	6.333972295027152	CCCATAAAA
chr3	29291491	29291492	chr3:29291492:T:A	rs148092082	T	A	T	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr3	29293554	29293555	chr3:29293555:C:T	rs1020042	C	T	T	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr3	29393868	29393869	chr3:29393869:A:T	rs113124420	A	T	a	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr3	29483576	29483577	chr3:29483577:G:A	rs1561375	G	A	A	Hoxd9.mouse_homeodomain_1	3	1	+	7.075409217893736	8.409487817756228	CCCGTTAAA
chr3	29513467	29513468	chr3:29513468:C:T	rs138467995	C	T	C	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr3	29583299	29583300	chr3:29583300:C:G	rs74788590	C	G	C	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr3	29730210	29730211	chr3:29730211:A:C	rs55649763	A	C	A	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr3	29761734	29761735	chr3:29761735:G:A	rs9821715	G	A	G	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr3	29901501	29901502	chr3:29901502:T:C	rs17554023	T	C	T	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr3	30184489	30184490	chr3:30184490:C:T	rs72852475	C	T	C	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr3	30206678	30206679	chr3:30206679:T:G	rs1434007	T	G	T	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr3	30222754	30222755	chr3:30222755:C:A	rs75526707	C	A	C	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr3	30266795	30266796	chr3:30266796:G:A	rs9869860	G	A	G	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr3	30371268	30371269	chr3:30371269:G:A	rs9862172	G	A	A	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr3	30544774	30544775	chr3:30544775:G:C	rs7637245	G	C	G	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr3	30708583	30708584	chr3:30708584:A:G	rs68024322	A	G	A	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr3	30742993	30742994	chr3:30742994:C:T	rs1995450	C	T	C	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr3	31002693	31002694	chr3:31002694:G:A	rs4642168	G	A	A	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr3	31178700	31178701	chr3:31178701:T:C	rs28568608	T	C	T	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr3	31275698	31275699	chr3:31275699:A:G	rs117409416	A	G	G	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr3	31277862	31277863	chr3:31277863:A:C	rs7652050	A	C	C	Hoxd9.mouse_homeodomain_1	7	1	+	8.678783717710262	5.789367947679677	GCCATAAAA
chr3	31545075	31545076	chr3:31545076:G:A	rs78519734	G	A	G	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr3	31561981	31561982	chr3:31561982:G:A	rs62234709	G	A	g	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr3	31562814	31562815	chr3:31562815:A:G	rs145799332	A	G	G	Hoxd9.mouse_homeodomain_1	4	1	-	8.409487817756228	5.7544411728936495	CCCATTAAA
chr3	31606735	31606736	chr3:31606736:C:T	rs6800989	C	T	C	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr3	31717817	31717818	chr3:31717818:C:T	rs114381022	C	T	C	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr3	31968607	31968608	chr3:31968608:C:A	rs545649534	C	A	C	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr3	32045810	32045811	chr3:32045811:A:G	rs114083031	A	G	A	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr3	32157797	32157798	chr3:32157798:G:A	rs7613007	G	A	A	Hoxd9.mouse_homeodomain_1	3	1	+	7.654940340027237	8.98901893988973	CCCGTAAAA
chr3	32200705	32200706	chr3:32200706:G:A	rs6792182	G	A	G	Hoxd9.mouse_homeodomain_1	0	1	+	7.716978748812629	6.928093714955487	GACATAAAA
chr3	32289193	32289194	chr3:32289194:C:T	rs4276227	C	T	T	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr3	32407413	32407414	chr3:32407414:C:A	rs11920938	C	A	A	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr3	32435498	32435499	chr3:32435499:G:A	rs347145	G	A	A	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr3	32467029	32467030	chr3:32467030:C:T	rs67391608	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	-	7.9772278588234515	7.188342824966311	GCAATAAAA
chr3	33030929	33030930	chr3:33030930:A:G	rs9873651	A	G	A	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr3	33224928	33224929	chr3:33224929:T:C	rs35754451	T	C	T	Hoxd9.mouse_homeodomain_1	7	1	-	8.027213970992095	1.3233880244003648	CACATAAAA
chr3	33300418	33300419	chr3:33300419:A:G	rs72862399	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	7.212456609225008	5.878378009362515	GCCATAAAG
chr3	33897542	33897543	chr3:33897543:T:C	rs112825532	T	C	T	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr3	33921908	33921909	chr3:33921909:G:A	rs72861543	G	A	G	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr3	33921935	33921936	chr3:33921936:G:T	rs9848590	G	T	G	Hoxd9.mouse_homeodomain_1	0	1	-	8.027213970992095	6.928093714955487	CACATAAAA
chr3	33956356	33956357	chr3:33956357:T:C	rs4678623	T	C	C	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr3	34184442	34184443	chr3:34184443:T:C	rs920474	T	C	C	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr3	34352692	34352693	chr3:34352693:T:A	rs78966573	T	A	T	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr3	34633153	34633154	chr3:34633154:T:C	rs9757044	T	C	G	Hoxd9.mouse_homeodomain_1	3	1	-	8.099252595576761	6.765173995714267	GCCATTAAA
chr3	34948478	34948479	chr3:34948479:G:A	rs35381691	G	A	A	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr3	34985648	34985649	chr3:34985649:T:G	rs1112399	T	G	T	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr3	35362397	35362398	chr3:35362398:C:A	rs187593072	C	A	C	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr3	35653517	35653518	chr3:35653518:C:T	rs17201627	C	T	C	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr3	35677585	35677586	chr3:35677586:T:C	rs4678795	T	C	C	Hoxd9.mouse_homeodomain_1	4	1	+	8.98901893988973	6.333972295027152	CCCATAAAA
chr3	36698571	36698572	chr3:36698572:A:G	rs74396071	A	G	A	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr3	36784470	36784471	chr3:36784471:C:T	rs67527113	C	T	C	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr3	36908076	36908077	chr3:36908077:A:C	chr3:36908077:A:C	A	C	A	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr3	36964904	36964905	chr3:36964905:T:C	rs7649344	T	C	C	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr3	37236066	37236067	chr3:37236067:G:A	rs62244287	G	A	G	Hoxd9.mouse_homeodomain_1	3	1	+	7.654940340027237	8.98901893988973	CCCGTAAAA
chr3	37248330	37248331	chr3:37248331:C:T	rs336597	C	T	T	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr3	37526404	37526405	chr3:37526405:A:G	rs2162356	A	G	A	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr3	37782208	37782209	chr3:37782209:T:C	rs3845948	T	C	T	Hoxd9.mouse_homeodomain_1	2	1	-	7.9772278588234515	5.2107920602579325	GCAATAAAA
chr3	37862771	37862772	chr3:37862772:G:A	rs56069365	G	A	G	Hoxd9.mouse_homeodomain_1	0	1	-	7.241935125048919	5.347387819739977	CCCATACAA
chr3	37963159	37963160	chr3:37963160:A:G	rs568385316	A	G	A	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr3	37963169	37963170	chr3:37963170:A:G	rs6776745	A	G	G	Hoxd9.mouse_homeodomain_1	3	1	+	7.212456609225008	5.878378009362515	GCCATAAAG
chr3	37963691	37963692	chr3:37963692:G:A	rs6801985	G	A	A	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr3	38155224	38155225	chr3:38155225:G:T	rs143771440	G	T	G	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr3	38427061	38427062	chr3:38427062:T:G	rs4679048	T	G	T	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr3	38770286	38770287	chr3:38770287:T:C	rs62244079	T	C	C	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr3	39011819	39011820	chr3:39011820:C:T	rs7623850	C	T	T	Hoxd9.mouse_homeodomain_1	2	1	+	7.075409217893736	0.5879687602700975	CCCGTTAAA
chr3	39138172	39138173	chr3:39138173:T:G	rs140576695	T	G	T	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr3	39176810	39176811	chr3:39176811:T:C	rs184354580	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.9772278588234515	6.643149258960959	GCAATAAAA
chr3	39249799	39249800	chr3:39249800:A:G	rs12491692	A	G	A	Hoxd9.mouse_homeodomain_1	5	1	+	7.212456609225008	0.8382668909784519	GCCATAAAG
chr3	39345009	39345010	chr3:39345010:C:G	rs6809646	C	G	C	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr3	39379489	39379490	chr3:39379490:T:G	rs56386899	T	G	T	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr3	39473831	39473832	chr3:39473832:G:T	rs112637160	G	T	G	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr3	39911449	39911450	chr3:39911450:T:C	rs115765203	T	C	t	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr3	39920275	39920276	chr3:39920276:C:T	rs12631602	C	T	t	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr3	39971975	39971976	chr3:39971976:A:C	rs4591446	A	C	C	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr3	40035428	40035429	chr3:40035429:G:T	rs7630287	G	T	T	Hoxd9.mouse_homeodomain_1	0	1	+	7.716978748812629	6.132666665683155	GACATAAAA
chr3	40079972	40079973	chr3:40079973:T:C	rs532670807	T	C	T	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr3	40153863	40153864	chr3:40153864:G:A	rs12486621	G	A	G	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr3	40172192	40172193	chr3:40172193:A:G	rs7624326	A	G	A	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr3	40193772	40193773	chr3:40193773:T:C	rs2679814	T	C	T	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr3	40205412	40205413	chr3:40205413:G:A	rs2679808	G	A	A	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr3	40398344	40398345	chr3:40398345:C:T	rs9863737	C	T	C	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr3	41020567	41020568	chr3:41020568:C:T	rs436912	C	T	T	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr3	41039332	41039333	chr3:41039333:G:A	rs741630	G	A	A	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr3	41039370	41039371	chr3:41039371:T:C	rs381272	T	C	T	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr3	41039564	41039565	chr3:41039565:T:G	rs380628	T	G	G	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr3	41039565	41039566	chr3:41039566:T:C	rs380616	T	C	C	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr3	41168242	41168243	chr3:41168243:A:T	rs919097	A	T	T	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr3	41200324	41200325	chr3:41200325:T:C	chr3:41200325:T:C	T	C	T	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr3	41200356	41200357	chr3:41200357:A:G	rs143024072	A	G	A	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr3	41364836	41364837	chr3:41364837:G:T	rs4544584	G	T	G	Hoxd9.mouse_homeodomain_1	2	1	-	7.34470511784777	6.643149258960959	GCCGTAAAA
chr3	41520074	41520075	chr3:41520075:C:A	rs9866353	C	A	C	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr3	41881516	41881517	chr3:41881517:G:A	rs73081392	G	A	G	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr3	42032710	42032711	chr3:42032711:A:C	rs73075261	A	C	A	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr3	42032724	42032725	chr3:42032725:G:A	rs56030108	G	A	G	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr3	42033078	42033079	chr3:42033079:A:C	rs116365675	A	C	A	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr3	42033121	42033122	chr3:42033122:C:T	rs182337852	C	T	C	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr3	42047515	42047516	chr3:42047516:C:T	rs55920039	C	T	T	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr3	42055280	42055281	chr3:42055281:C:A	rs146355807	C	A	C	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr3	42113886	42113887	chr3:42113887:C:T	rs75563240	C	T	C	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr3	42131043	42131044	chr3:42131044:G:A	rs73828569	G	A	A	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr3	42189891	42189892	chr3:42189892:A:G	rs73828593	A	G	A	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr3	42195195	42195196	chr3:42195196:A:G	rs184172839	A	G	A	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr3	42349744	42349745	chr3:42349745:C:A	rs33509	C	A	A	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr3	42718419	42718420	chr3:42718420:G:A	rs115135973	G	A	G	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr3	42751493	42751494	chr3:42751494:C:T	rs62246607	C	T	C	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr3	43028465	43028466	chr3:43028466:T:C	rs11711497	T	C	T	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr3	43036543	43036544	chr3:43036544:G:A	rs35339908	G	A	A	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr3	43207058	43207059	chr3:43207059:G:A	rs13084590	G	A	G	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr3	43511235	43511236	chr3:43511236:T:C	rs6772068	T	C	T	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr3	43606542	43606543	chr3:43606543:G:T	rs1482651	G	T	T	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr3	43647659	43647660	chr3:43647660:C:G	rs56318617	C	G	G	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr3	43888626	43888627	chr3:43888627:T:G	rs11710794	T	G	T	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr3	43888662	43888663	chr3:43888663:T:G	rs11710802	T	G	T	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr3	43978323	43978324	chr3:43978324:A:C	rs28731098	A	C	C	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr3	44027365	44027366	chr3:44027366:A:G	rs55815754	A	G	A	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr3	44100024	44100025	chr3:44100025:T:G	rs72869217	T	G	T	Hoxd9.mouse_homeodomain_1	5	1	-	7.889898683853121	5.992591131293127	ACCATAAAA
chr3	44237446	44237447	chr3:44237447:G:A	rs77366663	G	A	G	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr3	44874592	44874593	chr3:44874593:T:G	rs113276215	T	G	T	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr3	45019557	45019558	chr3:45019558:G:A	rs17570350	G	A	G	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr3	45058763	45058764	chr3:45058764:A:C	rs62242480	A	C	C	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr3	45120033	45120034	chr3:45120034:G:A	rs191954996	G	A	G	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr3	45170282	45170283	chr3:45170283:C:T	rs80009801	C	T	C	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr3	45190596	45190597	chr3:45190597:G:A	rs2195204	G	A	G	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr3	45215495	45215496	chr3:45215496:C:T	rs17077469	C	T	C	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr3	45563010	45563011	chr3:45563011:A:C	rs10452027	A	C	C	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr3	45613259	45613260	chr3:45613260:G:A	rs267225	G	A	A	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr3	46031798	46031799	chr3:46031799:T:G	rs140836134	T	G	T	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr3	46076946	46076947	chr3:46076947:T:C	rs35951367	T	C	T	Hoxd9.mouse_homeodomain_1	7	1	-	8.027213970992095	1.3233880244003648	CACATAAAA
chr3	46083018	46083019	chr3:46083019:G:C	rs17078589	G	C	C	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr3	46184672	46184673	chr3:46184673:T:C	rs34059564	T	C	C	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr3	46277016	46277017	chr3:46277017:A:G	rs7371987	A	G	G	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr3	46349898	46349899	chr3:46349899:A:G	rs6441972	A	G	A	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr3	46382515	46382516	chr3:46382516:C:T	rs916091	C	T	C	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr3	46418591	46418592	chr3:46418592:C:T	rs34474200	C	T	C	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr3	46422382	46422383	chr3:46422383:G:A	rs35386789	G	A	G	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr3	46580302	46580303	chr3:46580303:G:A	rs2280413	G	A	G	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr3	46672374	46672375	chr3:46672375:C:T	rs3935248	C	T	C	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr3	46863513	46863514	chr3:46863514:G:A	chr3:46863514:G:A	G	A	G	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr3	47029966	47029967	chr3:47029967:C:T	rs138884871	C	T	C	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr3	47365341	47365342	chr3:47365342:A:G	rs117287582	A	G	A	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr3	47814103	47814104	chr3:47814104:T:C	rs62263573	T	C	T	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr3	47814142	47814143	chr3:47814143:A:G	rs4858863	A	G	G	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr3	47981082	47981083	chr3:47981083:A:C	rs7426976	A	C	C	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr3	48012428	48012429	chr3:48012429:T:G	rs11918619	T	G	T	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr3	48217932	48217933	chr3:48217933:C:T	rs147278437	C	T	C	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr3	48711924	48711925	chr3:48711925:C:T	rs9882549	C	T	T	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr3	48869035	48869036	chr3:48869036:T:G	rs4974079	T	G	G	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr3	48917438	48917439	chr3:48917439:C:T	rs753810660	C	T	C	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr3	49256385	49256386	chr3:49256386:T:G	rs147025639	T	G	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.678783717710262	2.1032756135067814	GCCATAAAA
chr3	50433976	50433977	chr3:50433977:G:T	rs11917680	G	T	G	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr3	50626142	50626143	chr3:50626143:C:T	rs3792325	C	T	C	Hoxd9.mouse_homeodomain_1	3	1	-	7.34470511784777	8.678783717710262	GCCGTAAAA
chr3	50663818	50663819	chr3:50663819:T:C	rs80033764	T	C	T	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr3	51479219	51479220	chr3:51479220:G:A	rs7625821	G	A	G	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr3	51937281	51937282	chr3:51937282:G:A	rs145537768	G	A	G	Hoxd9.mouse_homeodomain_1	3	1	+	7.654940340027237	8.98901893988973	CCCGTAAAA
chr3	52090276	52090277	chr3:52090277:T:C	rs571106338	T	C	T	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr3	52110165	52110166	chr3:52110166:G:A	rs4687806	G	A	G	Hoxd9.mouse_homeodomain_1	0	1	-	8.027213970992095	6.132666665683155	CACATAAAA
chr3	52535932	52535933	chr3:52535933:C:T	rs60611300	C	T	C	Hoxd9.mouse_homeodomain_1	3	1	-	7.34470511784777	8.678783717710262	GCCGTAAAA
chr3	53086907	53086908	chr3:53086908:C:T	rs11130338	C	T	C	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr3	53102940	53102941	chr3:53102941:C:T	rs78454390	C	T	c	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr3	53423263	53423264	chr3:53423264:G:T	rs2129010	G	T	G	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr3	53619124	53619125	chr3:53619125:C:T	rs3796345	C	T	T	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr3	53717408	53717409	chr3:53717409:G:A	rs1565191	G	A	G	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr3	53747929	53747930	chr3:53747930:A:G	rs1809282	A	G	G	Hoxd9.mouse_homeodomain_1	7	1	+	7.075409217893736	0.3715832713020041	CCCGTTAAA
chr3	53764306	53764307	chr3:53764307:C:G	rs3774569	C	G	G	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr3	53815482	53815483	chr3:53815483:A:G	rs4687587	A	G	G	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr3	53891329	53891330	chr3:53891330:T:C	chr3:53891330:T:C	T	C	T	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr3	53897455	53897456	chr3:53897456:T:G	rs76634652	T	G	T	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr3	54129842	54129843	chr3:54129843:T:C	rs9831964	T	C	C	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr3	54305090	54305091	chr3:54305091:T:C	rs7627905	T	C	C	Hoxd9.mouse_homeodomain_1	6	1	-	7.091711387329735	0.38788544073800313	CCCATCAAA
chr3	54426298	54426299	chr3:54426299:G:A	rs7429237	G	A	A	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr3	54771782	54771783	chr3:54771783:T:C	rs13083683	T	C	C	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr3	54771819	54771820	chr3:54771820:T:G	rs4025824	T	G	T	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr3	54835104	54835105	chr3:54835105:T:C	rs34087197	T	C	T	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr3	54859662	54859663	chr3:54859663:A:G	rs890219128	A	G	A	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr3	54951423	54951424	chr3:54951424:C:T	rs4955910	C	T	T	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr3	55085508	55085509	chr3:55085509:A:G	rs165387	A	G	A	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr3	55128073	55128074	chr3:55128074:A:G	rs12493791	A	G	A	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr3	55272769	55272770	chr3:55272770:A:G	rs456256	A	G	A	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr3	55413486	55413487	chr3:55413487:G:A	rs3910862	G	A	G	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr3	55428141	55428142	chr3:55428142:C:T	rs6445740	C	T	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.34470511784777	8.678783717710262	GCCGTAAAA
chr3	55592886	55592887	chr3:55592887:C:T	rs1875108	C	T	T	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr3	55617724	55617725	chr3:55617725:G:C	rs2121011	G	C	G	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr3	55664013	55664014	chr3:55664014:G:A	rs815472	G	A	A	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr3	55718100	55718101	chr3:55718101:T:C	rs843797	T	C	C	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr3	55904242	55904243	chr3:55904243:T:C	rs80284383	T	C	T	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr3	56053915	56053916	chr3:56053916:A:C	rs78318205	A	C	A	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr3	56301251	56301252	chr3:56301252:C:G	rs11714882	C	G	G	Hoxd9.mouse_homeodomain_1	1	1	+	7.889898683853121	1.480365455070757	ACCATAAAA
chr3	56407090	56407091	chr3:56407091:T:G	rs11130520	T	G	T	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr3	56674137	56674138	chr3:56674138:A:C	rs9872059	A	C	A	Hoxd9.mouse_homeodomain_1	8	1	+	7.889898683853121	6.357331058510722	ACCATAAAA
chr3	56751527	56751528	chr3:56751528:C:T	rs6792241	C	T	C	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr3	56762377	56762378	chr3:56762378:G:C	rs78360991	G	C	G	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr3	56799342	56799343	chr3:56799343:A:C	chr3:56799343:A:C	A	C	A	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr3	56856169	56856170	chr3:56856170:G:A	rs56364617	G	A	G	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr3	56885481	56885482	chr3:56885482:C:A	rs55949100	C	A	C	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr3	56896490	56896491	chr3:56896491:G:A	chr3:56896491:G:A	G	A	G	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr3	56941052	56941053	chr3:56941053:G:A	rs2291976	G	A	G	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr3	57229365	57229366	chr3:57229366:G:C	rs4640525	G	C	G	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr3	57756150	57756151	chr3:57756151:G:C	rs531820219	G	C	G	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr3	57911854	57911855	chr3:57911855:G:A	rs9849219	G	A	G	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr3	58062954	58062955	chr3:58062955:C:T	rs6445941	C	T	C	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr3	58062971	58062972	chr3:58062972:A:G	rs6445942	A	G	G	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr3	58307909	58307910	chr3:58307910:A:G	rs76527737	A	G	A	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr3	58367535	58367536	chr3:58367536:T:C	rs7642018	T	C	C	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr3	58475488	58475489	chr3:58475489:A:T	rs4681856	A	T	A	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr3	58574315	58574316	chr3:58574316:G:T	rs6776877	G	T	G	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr3	58611496	58611497	chr3:58611497:T:C	rs4681697	T	C	T	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr3	59235736	59235737	chr3:59235737:G:C	rs938162	G	C	C	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr3	59328179	59328180	chr3:59328180:G:A	rs4679612	G	A	G	Hoxd9.mouse_homeodomain_1	0	1	-	7.522691831404475	5.628144526095533	CCCATAAAG
chr3	59422660	59422661	chr3:59422661:G:A	rs9822992	G	A	G	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr3	59655780	59655781	chr3:59655781:C:T	rs67804975	C	T	C	Hoxd9.mouse_homeodomain_1	1	1	+	8.98901893988973	7.674217025556723	CCCATAAAA
chr3	59661057	59661058	chr3:59661058:A:G	rs11709748	A	G	a	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr3	59678418	59678419	chr3:59678419:A:G	rs28700191	A	G	A	Hoxd9.mouse_homeodomain_1	7	1	+	7.091711387329735	0.38788544073800313	CCCATCAAA
chr3	59699674	59699675	chr3:59699675:A:T	rs11916043	A	T	T	Hoxd9.mouse_homeodomain_1	3	1	+	7.212456609225008	5.2089754724163635	GCCATAAAG
chr3	59699675	59699676	chr3:59699676:T:G	rs11927857	T	G	G	Hoxd9.mouse_homeodomain_1	4	1	+	7.212456609225008	0.3706381618944015	GCCATAAAG
chr3	59774665	59774666	chr3:59774666:G:C	rs115997791	G	C	-	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr3	59774691	59774692	chr3:59774692:C:G	rs575614	C	G	C	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr3	59775951	59775952	chr3:59775952:C:T	rs780364	C	T	T	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr3	59820971	59820972	chr3:59820972:A:T	rs17362087	A	T	A	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr3	59820987	59820988	chr3:59820988:G:A	rs112066546	G	A	G	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr3	59865686	59865687	chr3:59865687:A:G	rs609891	A	G	A	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr3	59927145	59927146	chr3:59927146:G:A	rs6793471	G	A	G	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr3	59981721	59981722	chr3:59981722:G:C	rs11711525	G	C	G	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr3	59986129	59986130	chr3:59986130:C:G	rs3821482	C	G	G	Hoxd9.mouse_homeodomain_1	8	1	-	7.212456609225008	7.1462160923678635	GCCATAAAG
chr3	59986141	59986142	chr3:59986142:T:C	rs2630192	T	C	C	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr3	60278198	60278199	chr3:60278199:G:C	rs213357	G	C	C	Hoxd9.mouse_homeodomain_1	2	1	-	7.716978748812629	4.248987091360299	GACATAAAA
chr3	60384628	60384629	chr3:60384629:G:A	rs9847855	G	A	G	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr3	60430679	60430680	chr3:60430680:A:T	rs1996829	A	T	.	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr3	60436001	60436002	chr3:60436002:T:C	rs12488124	T	C	t	Hoxd9.mouse_homeodomain_1	3	1	-	8.678783717710262	7.34470511784777	GCCATAAAA
chr3	60559927	60559928	chr3:60559928:T:A	rs180999	T	A	T	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr3	60673311	60673312	chr3:60673312:A:G	rs62251501	A	G	A	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr3	60770623	60770624	chr3:60770624:C:G	rs6765136	C	G	G	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr3	61146112	61146113	chr3:61146113:C:T	rs4688293	C	T	C	Hoxd9.mouse_homeodomain_1	2	1	+	7.716978748812629	1.2295382911889927	GACATAAAA
chr3	61160083	61160084	chr3:61160084:C:T	rs2886377	C	T	C	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr3	61252841	61252842	chr3:61252842:T:C	rs56895934	T	C	T	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr3	61277187	61277188	chr3:61277188:C:T	rs74278876	C	T	C	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr3	61730286	61730287	chr3:61730287:G:T	rs73842333	G	T	G	Hoxd9.mouse_homeodomain_1	1	1	-	7.212456609225008	6.250651640327374	GCCATAAAG
chr3	61814882	61814883	chr3:61814883:A:G	rs66930137	A	G	A	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr3	61821549	61821550	chr3:61821550:C:G	rs62243182	C	G	C	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr3	61841880	61841881	chr3:61841881:A:T	rs622358	A	T	T	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr3	61846635	61846636	chr3:61846636:T:C	rs60291426	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.287463081002919	6.953384481140425	CCAATAAAA
chr3	61861504	61861505	chr3:61861505:G:A	rs12630640	G	A	G	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr3	61962283	61962284	chr3:61962284:C:T	rs56333420	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	-	7.9772278588234515	7.188342824966311	GCAATAAAA
chr3	61975297	61975298	chr3:61975298:G:A	rs7649638	G	A	A	Hoxd9.mouse_homeodomain_1	1	1	-	7.1462160923678635	5.831414178034855	GCCATAAAC
chr3	61978812	61978813	chr3:61978813:A:G	rs7651655	A	G	A	Hoxd9.mouse_homeodomain_1	2	1	+	8.287463081002919	5.5210272824374	CCAATAAAA
chr3	61979791	61979792	chr3:61979792:G:A	rs1382796	G	A	A	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr3	61996465	61996466	chr3:61996466:T:C	rs1209111	T	C	T	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr3	62604855	62604856	chr3:62604856:G:A	rs79837268	G	A	G	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr3	62670583	62670584	chr3:62670584:C:A	rs10510883	C	A	C	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr3	62687067	62687068	chr3:62687068:C:T	rs17066807	C	T	C	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr3	62703842	62703843	chr3:62703843:C:T	rs34440160	C	T	T	Hoxd9.mouse_homeodomain_1	0	1	+	8.027213970992095	6.132666665683155	CACATAAAA
chr3	62882956	62882957	chr3:62882957:T:C	rs75527739	T	C	T	Hoxd9.mouse_homeodomain_1	4	1	+	8.027213970992095	5.372167326129518	CACATAAAA
chr3	63471677	63471678	chr3:63471678:C:T	rs28738794	C	T	C	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr3	63567244	63567245	chr3:63567245:A:G	rs28559285	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.409487817756228	7.075409217893736	CCCATTAAA
chr3	63603590	63603591	chr3:63603591:A:G	rs6789796	A	G	G	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr3	63618948	63618949	chr3:63618949:C:T	rs78386217	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	+	8.287463081002919	6.392915775693977	CCAATAAAA
chr3	64017276	64017277	chr3:64017277:G:A	rs9809432	G	A	G	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr3	64150427	64150428	chr3:64150428:T:C	rs75857239	T	C	T	Hoxd9.mouse_homeodomain_1	5	1	-	7.9772278588234515	1.603038140576896	GCAATAAAA
chr3	64150433	64150434	chr3:64150434:G:A	rs26941	G	A	A	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr3	64342348	64342349	chr3:64342349:G:T	rs6791551	G	T	G	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr3	64457841	64457842	chr3:64457842:C:T	rs7651603	C	T	T	Hoxd9.mouse_homeodomain_1	2	1	+	8.409487817756228	1.922047360132591	CCCATTAAA
chr3	64509360	64509361	chr3:64509361:T:A	rs749779460	T	A	T	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr3	64609913	64609914	chr3:64609914:T:C	rs74279543	T	C	T	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr3	64617554	64617555	chr3:64617555:T:C	rs75064633	T	C	T	Hoxd9.mouse_homeodomain_1	4	1	+	7.716978748812629	5.061932103950051	GACATAAAA
chr3	64961566	64961567	chr3:64961567:C:T	rs1517923	C	T	C	Hoxd9.mouse_homeodomain_1	1	1	+	8.287463081002919	6.972661166669912	CCAATAAAA
chr3	65001896	65001897	chr3:65001897:C:A	rs9875996	C	A	A	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr3	65033766	65033767	chr3:65033767:C:T	rs13071619	C	T	C	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr3	65035120	65035121	chr3:65035121:C:T	rs11717899	C	T	A	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr3	65174969	65174970	chr3:65174970:T:C	rs9867833	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.716978748812629	6.382900148950135	GACATAAAA
chr3	65174971	65174972	chr3:65174972:T:A	rs78340293	T	A	T	Hoxd9.mouse_homeodomain_1	1	1	-	7.716978748812629	7.363981803377255	GACATAAAA
chr3	65225617	65225618	chr3:65225618:A:G	rs368459740	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.027213970992095	6.693135371129603	CACATAAAA
chr3	65851385	65851386	chr3:65851386:A:G	rs6786634	A	G	G	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr3	66059701	66059702	chr3:66059702:A:T	rs28646177	A	T	T	Hoxd9.mouse_homeodomain_1	6	1	+	8.98901893988973	6.099603169859144	CCCATAAAA
chr3	66084053	66084054	chr3:66084054:A:G	rs116737506	A	G	A	Hoxd9.mouse_homeodomain_1	4	1	-	7.9772278588234515	5.3221812139608735	GCAATAAAA
chr3	66249272	66249273	chr3:66249273:T:C	rs34404567	T	C	T	Hoxd9.mouse_homeodomain_1	6	1	-	7.889898683853121	1.18607273726139	ACCATAAAA
chr3	66299869	66299870	chr3:66299870:A:G	rs782751	A	G	G	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr3	66324380	66324381	chr3:66324381:A:G	rs9875000	A	G	G	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr3	66378377	66378378	chr3:66378378:C:T	rs148174157	C	T	C	Hoxd9.mouse_homeodomain_1	1	1	+	8.98901893988973	7.674217025556723	CCCATAAAA
chr3	66392543	66392544	chr3:66392544:A:C	rs783133	A	C	A	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr3	66397882	66397883	chr3:66397883:A:G	rs12633819	A	G	A	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr3	66402492	66402493	chr3:66402493:G:C	rs7618786	G	C	G	Hoxd9.mouse_homeodomain_1	1	1	-	7.1462160923678635	0.7366828635854974	GCCATAAAC
chr3	66483143	66483144	chr3:66483144:C:G	rs6781851	C	G	C	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr3	66483159	66483160	chr3:66483160:T:C	rs6789830	T	C	T	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr3	66577839	66577840	chr3:66577840:G:C	rs148896846	G	C	G	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr3	66594197	66594198	chr3:66594198:A:G	chr3:66594198:A:G	A	G	A	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr3	66594207	66594208	chr3:66594208:A:G	rs6805078	A	G	A	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr3	66739193	66739194	chr3:66739194:C:G	rs77019002	C	G	C	Hoxd9.mouse_homeodomain_1	0	1	+	8.409487817756228	8.099252595576761	CCCATTAAA
chr3	66747163	66747164	chr3:66747164:A:C	rs57438521	A	C	A	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr3	66761520	66761521	chr3:66761521:T:C	rs6765774	T	C	C	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr3	66812293	66812294	chr3:66812294:C:T	rs7638057	C	T	T	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr3	66818184	66818185	chr3:66818185:C:T	rs10049466	C	T	T	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr3	67360741	67360742	chr3:67360742:A:G	rs902321	A	G	A	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr3	67490157	67490158	chr3:67490158:G:A	rs73088910	G	A	G	Hoxd9.mouse_homeodomain_1	1	1	-	7.34470511784777	6.0299032035147615	GCCGTAAAA
chr3	67605095	67605096	chr3:67605096:A:C	rs4588377	A	C	C	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr3	68322269	68322270	chr3:68322270:C:G	rs34485001	C	G	C	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr3	68536097	68536098	chr3:68536098:C:T	rs116149083	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	+	8.027213970992095	6.132666665683155	CACATAAAA
chr3	68666747	68666748	chr3:68666748:G:A	rs6781321	G	A	G	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr3	68937339	68937340	chr3:68937340:A:T	rs6787117	A	T	T	Hoxd9.mouse_homeodomain_1	5	1	+	7.34470511784777	6.765173995714267	GCCGTAAAA
chr3	68989065	68989066	chr3:68989066:A:G	rs4855543	A	G	a	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr3	69033721	69033722	chr3:69033722:G:T	rs937858	G	T	T	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr3	69200898	69200899	chr3:69200899:A:G	rs372139382	A	G	A	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr3	69445426	69445427	chr3:69445427:A:C	rs9818394	A	C	C	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr3	69459070	69459071	chr3:69459071:T:C	rs9868115	T	C	C	Hoxd9.mouse_homeodomain_1	8	1	-	8.027213970992095	6.560886862506841	CACATAAAA
chr3	69484809	69484810	chr3:69484810:C:T	rs76726643	C	T	C	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr3	69504187	69504188	chr3:69504188:A:T	rs1498851	A	T	T	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr3	69504188	69504189	chr3:69504189:G:A	rs1909349	G	A	A	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr3	69526528	69526529	chr3:69526529:G:T	rs11915680	G	T	G	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr3	69685801	69685802	chr3:69685802:T:C	rs11713102	T	C	T	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr3	69702434	69702435	chr3:69702435:T:C	rs1427431	T	C	T	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr3	69723289	69723290	chr3:69723290:A:T	rs7618435	A	T	T	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr3	69972747	69972748	chr3:69972748:A:C	rs6549254	A	C	A	Hoxd9.mouse_homeodomain_1	5	1	+	7.9772278588234515	6.079920306263457	GCAATAAAA
chr3	70090717	70090718	chr3:70090718:A:G	rs77604595	A	G	A	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr3	70267711	70267712	chr3:70267712:A:G	rs6785155	A	G	A	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr3	70277517	70277518	chr3:70277518:C:A	rs17006997	C	A	C	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr3	70566211	70566212	chr3:70566212:A:C	rs56108024	A	C	A	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr3	70703431	70703432	chr3:70703432:G:A	rs78194521	G	A	A	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr3	71007137	71007138	chr3:71007138:A:G	rs76387837	A	G	A	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr3	71032684	71032685	chr3:71032685:C:A	rs9861326	C	A	C	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr3	71032713	71032714	chr3:71032714:A:G	rs9880715	A	G	G	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr3	71267123	71267124	chr3:71267124:A:T	rs557869288	A	T	A	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr3	71288429	71288430	chr3:71288430:G:A	rs59608381	G	A	G	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr3	71315401	71315402	chr3:71315402:A:T	rs9790300	A	T	A	Hoxd9.mouse_homeodomain_1	5	1	+	8.287463081002919	7.707931958869418	CCAATAAAA
chr3	71425854	71425855	chr3:71425855:T:C	rs60425923	T	C	.	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr3	71462027	71462028	chr3:71462028:A:C	rs899760026	A	C	A	Hoxd9.mouse_homeodomain_1	8	1	+	8.98901893988973	7.45645131454733	CCCATAAAA
chr3	71694459	71694460	chr3:71694460:A:G	rs572355575	A	G	A	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr3	71711191	71711192	chr3:71711192:T:C	rs900809524	T	C	T	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr3	71729990	71729991	chr3:71729991:C:T	rs199498749	C	T	C	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr3	71832716	71832717	chr3:71832717:T:G	rs9831453	T	G	T	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr3	71894178	71894179	chr3:71894179:T:C	rs6772076	T	C	C	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr3	71982767	71982768	chr3:71982768:G:A	rs1847872	G	A	A	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr3	72013257	72013258	chr3:72013258:G:C	rs2036595	G	C	C	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr3	72013259	72013260	chr3:72013260:A:G	rs9850131	A	G	A	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr3	72044310	72044311	chr3:72044311:T:C	rs9864276	T	C	T	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr3	72044345	72044346	chr3:72044346:C:G	rs11712307	C	G	C	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr3	72118930	72118931	chr3:72118931:C:T	rs7634042	C	T	C	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr3	72265605	72265606	chr3:72265606:A:G	rs78638073	A	G	A	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr3	72341889	72341890	chr3:72341890:C:T	rs192452480	C	T	C	Hoxd9.mouse_homeodomain_1	1	1	+	7.45645131454733	6.141649400214323	CCCATAAAC
chr3	72344916	72344917	chr3:72344917:T:C	rs111639267	T	C	T	Hoxd9.mouse_homeodomain_1	2	1	-	8.287463081002919	5.5210272824374	CCAATAAAA
chr3	72568138	72568139	chr3:72568139:A:G	rs902425	A	G	A	Hoxd9.mouse_homeodomain_1	4	1	-	8.98901893988973	6.333972295027152	CCCATAAAA
chr3	72594123	72594124	chr3:72594124:G:C	rs7643429	G	C	C	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr3	72604262	72604263	chr3:72604263:A:G	rs1994626	A	G	A	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr3	72664892	72664893	chr3:72664893:T:C	rs4677203	T	C	T	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr3	72924580	72924581	chr3:72924581:G:A	rs7640661	G	A	A	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr3	72975806	72975807	chr3:72975807:T:C	rs2087662	T	C	C	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr3	73026902	73026903	chr3:73026903:C:T	rs6778819	C	T	T	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr3	73107851	73107852	chr3:73107852:C:T	rs78748216	C	T	C	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr3	73123683	73123684	chr3:73123684:T:C	rs301547	T	C	T	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr3	73123684	73123685	chr3:73123685:G:T	rs1486287	G	T	G	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr3	73155638	73155639	chr3:73155639:A:G	rs34729990	A	G	G	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr3	73409645	73409646	chr3:73409646:G:C	rs11128335	G	C	G	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr3	73428138	73428139	chr3:73428139:G:A	rs34905960	G	A	G	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr3	73452023	73452024	chr3:73452024:A:G	rs2324088	A	G	A	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr3	73457951	73457952	chr3:73457952:T:C	rs11709074	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.678783717710262	7.34470511784777	GCCATAAAA
chr3	73486439	73486440	chr3:73486440:C:A	rs11128341	C	A	C	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr3	73557486	73557487	chr3:73557487:C:T	rs35594519	C	T	C	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr3	73565873	73565874	chr3:73565874:A:G	rs966021252	A	G	A	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr3	73573465	73573466	chr3:73573466:C:T	rs13069684	C	T	C	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr3	73591127	73591128	chr3:73591128:T:C	rs11128348	T	C	T	Hoxd9.mouse_homeodomain_1	4	1	+	7.716978748812629	5.061932103950051	GACATAAAA
chr3	74165231	74165232	chr3:74165232:T:C	rs17712528	T	C	T	Hoxd9.mouse_homeodomain_1	4	1	+	7.889898683853121	5.234852038990543	ACCATAAAA
chr3	74352934	74352935	chr3:74352935:A:C	rs471213	A	C	A	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr3	74430220	74430221	chr3:74430221:C:T	rs1055265494	C	T	C	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr3	74539972	74539973	chr3:74539973:A:C	rs929231321	A	C	A	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr3	74552252	74552253	chr3:74552253:T:C	rs79893371	T	C	T	Hoxd9.mouse_homeodomain_1	4	1	+	7.1462160923678635	4.491169447505284	GCCATAAAC
chr3	74571522	74571523	chr3:74571523:A:G	rs78409335	A	G	A	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr3	74571525	74571526	chr3:74571526:C:A	rs4677416	C	A	A	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr3	75408706	75408707	chr3:75408707:A:G	rs11712374	A	G	.	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr3	75502334	75502335	chr3:75502335:A:G	rs6787723	A	G	.	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr3	75502763	75502764	chr3:75502764:A:G	rs34134151	A	G	.	Hoxd9.mouse_homeodomain_1	4	1	-	8.287463081002919	5.632416436140341	CCAATAAAA
chr3	75810097	75810098	chr3:75810098:G:T	rs7648147	G	T	g	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr3	76054871	76054872	chr3:76054872:A:T	rs9812834	A	T	T	Hoxd9.mouse_homeodomain_1	3	1	+	7.45645131454733	5.452970177738685	CCCATAAAC
chr3	76131656	76131657	chr3:76131657:T:C	rs17013860	T	C	T	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr3	76178665	76178666	chr3:76178666:T:C	rs1845703	T	C	T	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr3	76255365	76255366	chr3:76255366:T:C	rs35130755	T	C	T	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr3	76256934	76256935	chr3:76256935:C:T	rs72630384	C	T	C	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr3	77096808	77096809	chr3:77096809:A:C	rs11710191	A	C	A	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr3	77121954	77121955	chr3:77121955:A:G	rs187257591	A	G	A	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr3	77257319	77257320	chr3:77257320:T:C	rs2119745	T	C	c	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr3	77348244	77348245	chr3:77348245:G:A	rs77591111	G	A	G	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr3	78004719	78004720	chr3:78004720:T:C	rs62256171	T	C	T	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr3	78201169	78201170	chr3:78201170:A:G	rs7427302	A	G	G	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr3	78368817	78368818	chr3:78368818:A:G	rs11915895	A	G	A	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr3	78533560	78533561	chr3:78533561:A:G	rs4470471	A	G	G	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr3	78540708	78540709	chr3:78540709:T:A	rs6548585	T	A	T	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr3	79769561	79769562	chr3:79769562:A:G	rs75251632	A	G	A	Hoxd9.mouse_homeodomain_1	4	1	-	8.027213970992095	5.372167326129518	CACATAAAA
chr3	80051855	80051856	chr3:80051856:C:A	rs75943237	C	A	C	Hoxd9.mouse_homeodomain_1	0	1	+	7.45645131454733	6.357331058510722	CCCATAAAC
chr3	80193054	80193055	chr3:80193055:C:A	chr3:80193055:C:A	C	A	C	Hoxd9.mouse_homeodomain_1	1	1	+	7.212456609225008	6.250651640327374	GCCATAAAG
chr3	80230948	80230949	chr3:80230949:T:A	rs72901331	T	A	T	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr3	80292043	80292044	chr3:80292044:C:T	rs1116204	C	T	C	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr3	80655400	80655401	chr3:80655401:T:A	rs116711749	T	A	T	Hoxd9.mouse_homeodomain_1	1	1	-	7.716978748812629	7.363981803377255	GACATAAAA
chr3	80750499	80750500	chr3:80750500:T:G	rs9817152	T	G	G	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr3	80982139	80982140	chr3:80982140:C:A	rs13061686	C	A	C	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr3	81610870	81610871	chr3:81610871:T:C	rs9814053	T	C	C	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr3	81762505	81762506	chr3:81762506:G:A	rs76678358	G	A	G	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr3	82566710	82566711	chr3:82566711:C:T	rs78294469	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	+	8.98901893988973	7.094471634580788	CCCATAAAA
chr3	84222476	84222477	chr3:84222477:A:G	rs78897554	A	G	A	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr3	84904774	84904775	chr3:84904775:G:T	rs1691485	G	T	T	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr3	84962320	84962321	chr3:84962321:G:A	rs17022116	G	A	G	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr3	85567151	85567152	chr3:85567152:G:T	rs17460464	G	T	G	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr3	85826508	85826509	chr3:85826509:C:T	rs17023377	C	T	T	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr3	86177196	86177197	chr3:86177197:T:G	rs7625548	T	G	G	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr3	86180549	86180550	chr3:86180550:C:T	rs7651338	C	T	T	Hoxd9.mouse_homeodomain_1	2	1	+	8.409487817756228	1.922047360132591	CCCATTAAA
chr3	86480636	86480637	chr3:86480637:G:A	rs80236047	G	A	G	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr3	86537255	86537256	chr3:86537256:G:T	rs28891104	G	T	G	Hoxd9.mouse_homeodomain_1	0	1	-	8.98901893988973	7.889898683853121	CCCATAAAA
chr3	86561986	86561987	chr3:86561987:A:G	rs1845436	A	G	A	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr3	87175939	87175940	chr3:87175940:C:T	rs56269018	C	T	C	Hoxd9.mouse_homeodomain_1	2	1	+	7.34470511784777	0.8572646602241328	GCCGTAAAA
chr3	87541717	87541718	chr3:87541718:T:A	rs9855058	T	A	T	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr3	87596054	87596055	chr3:87596055:A:C	rs183208380	A	C	A	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr3	87771958	87771959	chr3:87771959:C:T	rs4362744	C	T	C	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr3	87791338	87791339	chr3:87791339:T:C	rs6781718	T	C	T	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr3	87955306	87955307	chr3:87955307:C:G	rs56231132	C	G	C	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr3	88031923	88031924	chr3:88031924:A:G	rs1431155	A	G	G	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr3	88059144	88059145	chr3:88059145:T:G	rs146514820	T	G	T	Hoxd9.mouse_homeodomain_1	4	1	+	8.287463081002919	1.445644633672313	CCAATAAAA
chr3	88209624	88209625	chr3:88209625:A:C	rs6805957	A	C	A	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr3	88443617	88443618	chr3:88443618:A:G	rs1463475	A	G	G	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr3	88773232	88773233	chr3:88773233:A:G	rs78397971	A	G	A	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr3	88822122	88822123	chr3:88822123:C:T	rs981433	C	T	C	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr3	88885259	88885260	chr3:88885260:A:G	rs6791503	A	G	T	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr3	88934894	88934895	chr3:88934895:G:A	rs34748523	G	A	G	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr3	89001298	89001299	chr3:89001299:G:A	rs148712686	G	A	A	Hoxd9.mouse_homeodomain_1	2	1	-	7.654940340027237	1.1674998824035994	CCCGTAAAA
chr3	89073139	89073140	chr3:89073140:A:C	rs36063632	A	C	C	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr3	89485441	89485442	chr3:89485442:G:T	rs73144998	G	T	T	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr3	90007229	90007230	chr3:90007230:G:A	rs1464463	G	A	G	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr3	90007302	90007303	chr3:90007303:A:G	rs11128080	A	G	G	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr3	90302163	90302164	chr3:90302164:A:T	rs9838264	A	T	.	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr3	90597900	90597901	chr3:90597901:G:T	rs1163264387	G	T	.	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr3	91047694	91047695	chr3:91047695:A:T	rs1328393689	A	T	.	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr3	91287481	91287482	chr3:91287482:C:T	rs1432909430	C	T	.	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr3	92375221	92375222	chr3:92375222:A:G	rs1259910724	A	G	.	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr3	94293939	94293940	chr3:94293940:T:G	rs34300056	T	G	T	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr3	94301615	94301616	chr3:94301616:G:A	rs151022265	G	A	G	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr3	94432138	94432139	chr3:94432139:T:C	rs113956605	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.287463081002919	6.953384481140425	CCAATAAAA
chr3	94862833	94862834	chr3:94862834:A:T	rs1368197	A	T	A	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr3	95138900	95138901	chr3:95138901:T:C	rs3903496	T	C	T	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr3	96068978	96068979	chr3:96068979:A:G	rs13100253	A	G	A	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr3	96327694	96327695	chr3:96327695:A:G	rs9713732	A	G	G	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr3	96327706	96327707	chr3:96327707:G:A	rs9864430	G	A	A	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr3	96332105	96332106	chr3:96332106:G:A	rs1473913	G	A	G	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr3	96677532	96677533	chr3:96677533:T:G	rs6770896	T	G	T	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr3	96705418	96705419	chr3:96705419:T:G	rs75439539	T	G	T	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr3	96962020	96962021	chr3:96962021:A:T	rs9823663	A	T	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.027213970992095	6.023732834183452	CACATAAAA
chr3	97087884	97087885	chr3:97087885:C:G	rs6438950	C	G	G	Hoxd9.mouse_homeodomain_1	1	1	+	8.409487817756228	1.9999545889738628	CCCATTAAA
chr3	97795373	97795374	chr3:97795374:G:A	rs4857292	G	A	G	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr3	97911342	97911343	chr3:97911343:C:T	rs141230757	C	T	C	Hoxd9.mouse_homeodomain_1	3	1	-	7.654940340027237	8.98901893988973	CCCGTAAAA
chr3	97984694	97984695	chr3:97984695:C:T	rs7355910	C	T	C	Hoxd9.mouse_homeodomain_1	1	1	+	8.409487817756228	7.094685903423221	CCCATTAAA
chr3	98058232	98058233	chr3:98058233:T:C	rs4414781	T	C	T	Hoxd9.mouse_homeodomain_1	4	1	+	7.889898683853121	5.234852038990543	ACCATAAAA
chr3	98058246	98058247	chr3:98058247:G:T	rs79615602	G	T	G	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr3	98154585	98154586	chr3:98154586:A:G	rs4130110	A	G	A	Hoxd9.mouse_homeodomain_1	4	1	-	8.409487817756228	5.7544411728936495	CCCATTAAA
chr3	98538721	98538722	chr3:98538722:T:G	chr3:98538722:T:G	T	G	T	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr3	98734165	98734166	chr3:98734166:C:A	rs278372	C	A	C	Hoxd9.mouse_homeodomain_1	1	1	+	7.889898683853121	6.928093714955487	ACCATAAAA
chr3	98785148	98785149	chr3:98785149:T:G	rs73136045	T	G	T	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr3	98902346	98902347	chr3:98902347:T:G	rs866549153	T	G	T	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr3	99097503	99097504	chr3:99097504:A:G	rs79430252	A	G	A	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr3	99129601	99129602	chr3:99129602:C:T	rs774961	C	T	T	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr3	99129602	99129603	chr3:99129603:G:A	rs115966818	G	A	G	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr3	99315486	99315487	chr3:99315487:G:A	rs16840977	G	A	G	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr3	99524604	99524605	chr3:99524605:A:G	rs67838133	A	G	A	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr3	99550240	99550241	chr3:99550241:G:T	rs73148222	G	T	G	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr3	99552854	99552855	chr3:99552855:T:C	rs938211	T	C	C	Hoxd9.mouse_homeodomain_1	5	1	-	8.98901893988973	2.6148292216431743	CCCATAAAA
chr3	100268104	100268105	chr3:100268105:G:A	rs7618677	G	A	G	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr3	100298615	100298616	chr3:100298616:C:A	rs3772696	C	A	C	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr3	100299870	100299871	chr3:100299871:C:T	rs1036770	C	T	T	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr3	100484906	100484907	chr3:100484907:A:G	rs7653215	A	G	G	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr3	100526513	100526514	chr3:100526514:G:A	rs61218849	G	A	G	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr3	100992521	100992522	chr3:100992522:G:A	rs75677294	G	A	G	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr3	101026978	101026979	chr3:101026979:G:T	rs9811022	G	T	G	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr3	101217403	101217404	chr3:101217404:C:A	rs9825713	C	A	A	Hoxd9.mouse_homeodomain_1	2	1	+	8.678783717710262	7.9772278588234515	GCCATAAAA
chr3	101260140	101260141	chr3:101260141:T:C	rs62282872	T	C	C	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr3	101409924	101409925	chr3:101409925:T:A	rs4683898	T	A	A	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr3	101792110	101792111	chr3:101792111:G:A	rs138391412	G	A	G	Hoxd9.mouse_homeodomain_1	1	1	-	8.409487817756228	7.094685903423221	CCCATTAAA
chr3	101849473	101849474	chr3:101849474:T:C	rs533412785	T	C	t	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr3	101890805	101890806	chr3:101890806:T:C	rs606407	T	C	C	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr3	101954691	101954692	chr3:101954692:C:G	rs9812393	C	G	G	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr3	101984356	101984357	chr3:101984357:C:T	rs9811747	C	T	C	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr3	102005687	102005688	chr3:102005688:T:C	rs1707582	T	C	T	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr3	102005876	102005877	chr3:102005877:T:C	rs1707581	T	C	T	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr3	102079236	102079237	chr3:102079237:A:G	rs35552417	A	G	A	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr3	102143946	102143947	chr3:102143947:G:A	rs55892075	G	A	G	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr3	102174802	102174803	chr3:102174803:T:G	rs7637595	T	G	T	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr3	102180199	102180200	chr3:102180200:C:T	rs62272113	C	T	C	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr3	102180210	102180211	chr3:102180211:G:A	rs73863459	G	A	G	Hoxd9.mouse_homeodomain_1	3	1	+	7.654940340027237	8.98901893988973	CCCGTAAAA
chr3	102206353	102206354	chr3:102206354:T:C	rs79318595	T	C	C	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr3	102476649	102476650	chr3:102476650:G:A	rs74782058	G	A	G	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr3	102569971	102569972	chr3:102569972:G:A	rs116476293	G	A	G	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr3	102827029	102827030	chr3:102827030:T:C	rs75890462	T	C	T	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr3	102827046	102827047	chr3:102827047:A:G	rs969308	A	G	A	Hoxd9.mouse_homeodomain_1	4	1	-	8.678783717710262	6.023737072847684	GCCATAAAA
chr3	103249137	103249138	chr3:103249138:A:C	rs71317722	A	C	C	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr3	103644788	103644789	chr3:103644789:A:G	rs4856080	A	G	A	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr3	103644789	103644790	chr3:103644790:T:C	rs114018918	T	C	T	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr3	103947273	103947274	chr3:103947274:A:G	rs9846345	A	G	A	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr3	104158832	104158833	chr3:104158833:A:G	rs1882005	A	G	A	Hoxd9.mouse_homeodomain_1	5	1	+	7.34470511784777	0.970515399601214	GCCGTAAAA
chr3	104263108	104263109	chr3:104263109:T:G	rs12497491	T	G	G	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr3	104516174	104516175	chr3:104516175:A:G	rs7429504	A	G	G	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr3	104521915	104521916	chr3:104521916:A:G	rs2961321	A	G	A	Hoxd9.mouse_homeodomain_1	4	1	-	8.678783717710262	6.023737072847684	GCCATAAAA
chr3	104579006	104579007	chr3:104579007:A:G	rs2961325	A	G	G	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr3	104612372	104612373	chr3:104612373:A:G	rs55978631	A	G	A	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr3	104612373	104612374	chr3:104612374:T:A	rs55788702	T	A	T	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr3	104906560	104906561	chr3:104906561:C:T	rs9873666	C	T	T	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr3	105043670	105043671	chr3:105043671:C:T	rs66833862	C	T	T	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr3	105043671	105043672	chr3:105043672:C:G	rs7612173	C	G	G	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr3	105316662	105316663	chr3:105316663:G:T	rs73175247	G	T	G	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr3	105608774	105608775	chr3:105608775:C:T	rs114622636	C	T	C	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr3	105677069	105677070	chr3:105677070:C:T	rs138477184	C	T	C	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr3	105752844	105752845	chr3:105752845:T:C	rs12054270	T	C	T	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr3	105826149	105826150	chr3:105826150:G:A	rs13084271	G	A	G	Hoxd9.mouse_homeodomain_1	0	1	-	7.45645131454733	5.561904009238388	CCCATAAAC
chr3	105851973	105851974	chr3:105851974:C:G	rs7629357	C	G	C	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr3	105877566	105877567	chr3:105877567:A:G	rs117472034	A	G	A	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr3	105886318	105886319	chr3:105886319:G:C	rs16844740	G	C	C	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr3	106015238	106015239	chr3:106015239:G:A	rs75522665	G	A	G	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr3	106103540	106103541	chr3:106103541:T:C	rs142690806	T	C	T	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr3	106283954	106283955	chr3:106283955:A:T	rs11920227	A	T	A	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr3	106324705	106324706	chr3:106324706:G:T	rs73200823	G	T	g	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr3	106371225	106371226	chr3:106371226:C:G	rs16852418	C	G	C	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr3	106487307	106487308	chr3:106487308:G:A	rs112425165	G	A	G	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr3	106528048	106528049	chr3:106528049:A:T	rs116476796	A	T	A	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr3	106660880	106660881	chr3:106660881:C:A	rs7610058	C	A	A	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr3	106778289	106778290	chr3:106778290:C:T	rs72931593	C	T	C	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr3	106986775	106986776	chr3:106986776:T:C	rs12639160	T	C	T	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr3	106996750	106996751	chr3:106996751:A:G	rs1399735	A	G	G	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr3	107085498	107085499	chr3:107085499:G:A	rs9832801	G	A	G	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr3	107217774	107217775	chr3:107217775:A:C	rs116829822	A	C	A	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr3	107239383	107239384	chr3:107239384:G:T	rs193294493	G	T	G	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr3	107310820	107310821	chr3:107310821:C:T	rs4855744	C	T	C	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr3	107419321	107419322	chr3:107419322:C:G	rs9869223	C	G	C	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr3	107705242	107705243	chr3:107705243:G:A	rs9846246	G	A	A	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr3	107705243	107705244	chr3:107705244:G:A	rs114985105	G	A	G	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr3	107705272	107705273	chr3:107705273:C:G	chr3:107705273:C:G	C	G	C	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr3	108175503	108175504	chr3:108175504:A:T	rs146048103	A	T	A	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr3	108175538	108175539	chr3:108175539:T:C	rs3804644	T	C	T	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr3	108252173	108252174	chr3:108252174:T:C	rs7622810	T	C	T	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr3	108343081	108343082	chr3:108343082:C:G	rs9810815	C	G	G	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr3	108345493	108345494	chr3:108345494:C:T	rs6805570	C	T	T	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr3	108351708	108351709	chr3:108351709:T:C	rs9846218	T	C	C	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr3	109231729	109231730	chr3:109231730:C:T	chr3:109231730:C:T	C	T	.	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr3	109269681	109269682	chr3:109269682:G:A	rs13061802	G	A	G	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr3	109412646	109412647	chr3:109412647:G:A	rs114949123	G	A	g	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr3	109743974	109743975	chr3:109743975:G:A	rs78502662	G	A	G	Hoxd9.mouse_homeodomain_1	3	1	+	7.654940340027237	8.98901893988973	CCCGTAAAA
chr3	109877747	109877748	chr3:109877748:A:G	rs1178855	A	G	A	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr3	110210505	110210506	chr3:110210506:G:A	rs9836130	G	A	G	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr3	110814273	110814274	chr3:110814274:A:G	rs183106770	A	G	A	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr3	110894775	110894776	chr3:110894776:A:G	rs1462809	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.287463081002919	6.953384481140425	CCAATAAAA
chr3	110995911	110995912	chr3:110995912:C:T	rs9835919	C	T	T	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr3	111242941	111242942	chr3:111242942:G:T	rs77043201	G	T	G	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr3	111485521	111485522	chr3:111485522:C:T	rs74485016	C	T	C	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr3	111739989	111739990	chr3:111739990:G:C	rs6788543	G	C	C	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr3	111769190	111769191	chr3:111769191:G:T	rs4682306	G	T	T	Hoxd9.mouse_homeodomain_1	1	1	-	7.241935125048919	6.2801301561512854	CCCATACAA
chr3	111887484	111887485	chr3:111887485:A:G	rs13064071	A	G	A	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr3	111903267	111903268	chr3:111903268:G:A	rs1041917201	G	A	G	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr3	111953103	111953104	chr3:111953104:T:G	rs147275250	T	G	T	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr3	112135349	112135350	chr3:112135350:G:A	rs1948404	G	A	G	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr3	112409295	112409296	chr3:112409296:T:C	rs1872987	T	C	c	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr3	112774458	112774459	chr3:112774459:T:C	rs1268971	T	C	T	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr3	112774467	112774468	chr3:112774468:C:T	rs138203200	C	T	C	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr3	112781915	112781916	chr3:112781916:A:G	rs2688602	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	7.212456609225008	5.878378009362515	GCCATAAAG
chr3	112885561	112885562	chr3:112885562:T:G	rs66732921	T	G	T	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr3	112991533	112991534	chr3:112991534:T:C	rs7651481	T	C	T	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr3	113110409	113110410	chr3:113110410:A:G	rs13071497	A	G	A	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr3	113157540	113157541	chr3:113157541:T:C	rs144164465	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.522691831404475	6.188613231541982	CCCATAAAG
chr3	113195369	113195370	chr3:113195370:T:C	rs916961788	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.98901893988973	7.654940340027237	CCCATAAAA
chr3	113227276	113227277	chr3:113227277:C:T	rs140756413	C	T	C	Hoxd9.mouse_homeodomain_1	8	1	-	7.522691831404475	8.98901893988973	CCCATAAAG
chr3	113227304	113227305	chr3:113227305:G:C	rs56258317	G	C	G	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr3	113258077	113258078	chr3:113258078:T:C	rs11928342	T	C	T	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr3	113380499	113380500	chr3:113380500:A:T	rs6438142	A	T	A	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr3	113570240	113570241	chr3:113570241:T:A	rs55941419	T	A	A	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr3	113830803	113830804	chr3:113830804:C:T	rs11706726	C	T	A	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr3	113830840	113830841	chr3:113830841:G:A	rs12486186	G	A	G	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr3	113933926	113933927	chr3:113933927:A:G	rs9865782	A	G	A	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr3	114128260	114128261	chr3:114128261:T:C	rs9817063	T	C	T	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr3	114672247	114672248	chr3:114672248:C:T	rs36012804	C	T	C	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr3	114733056	114733057	chr3:114733057:G:C	rs1298330	G	C	G	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr3	115549380	115549381	chr3:115549381:A:G	rs1909576	A	G	G	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr3	115576344	115576345	chr3:115576345:G:A	rs7637728	G	A	A	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr3	115687959	115687960	chr3:115687960:A:C	rs13065396	A	C	A	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr3	115881686	115881687	chr3:115881687:G:A	rs68160605	G	A	A	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr3	115943242	115943243	chr3:115943243:T:C	rs8179899	T	C	T	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr3	116238675	116238676	chr3:116238676:A:T	rs2163505	A	T	T	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr3	116255526	116255527	chr3:116255527:C:T	rs2279109	C	T	T	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr3	116440487	116440488	chr3:116440488:C:G	rs7647924	C	G	C	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr3	116760854	116760855	chr3:116760855:G:A	rs970958	G	A	G	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr3	117003482	117003483	chr3:117003483:A:G	rs9846364	A	G	A	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr3	117112653	117112654	chr3:117112654:T:C	rs1474236	T	C	C	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr3	117536084	117536085	chr3:117536085:A:T	rs9824879	A	T	T	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr3	117873131	117873132	chr3:117873132:G:A	rs78048644	G	A	G	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr3	117921319	117921320	chr3:117921320:G:C	rs7649429	G	C	C	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr3	117921351	117921352	chr3:117921352:C:A	rs6805565	C	A	C	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr3	118165574	118165575	chr3:118165575:A:T	rs34967527	A	T	A	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr3	118332906	118332907	chr3:118332907:T:A	rs77975613	T	A	T	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr3	119203460	119203461	chr3:119203461:T:G	rs13078534	T	G	T	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr3	119349312	119349313	chr3:119349313:A:T	rs58622897	A	T	A	Hoxd9.mouse_homeodomain_1	8	1	+	7.889898683853121	4.9573855590870535	ACCATAAAA
chr3	119622640	119622641	chr3:119622641:G:A	rs12639410	G	A	A	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr3	119649136	119649137	chr3:119649137:G:C	rs524043	G	C	C	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr3	119703728	119703729	chr3:119703729:G:C	rs35403027	G	C	G	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr3	119804104	119804105	chr3:119804105:C:G	rs150383333	C	G	C	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr3	120136562	120136563	chr3:120136563:T:C	rs923380	T	C	C	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr3	120394276	120394277	chr3:120394277:C:T	rs1147694	C	T	t	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr3	120421194	120421195	chr3:120421195:C:A	rs36068602	C	A	C	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr3	120601909	120601910	chr3:120601910:A:G	rs804970	A	G	G	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr3	120706373	120706374	chr3:120706374:T:C	chr3:120706374:T:C	T	C	T	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr3	120805321	120805322	chr3:120805322:A:G	rs401385	A	G	A	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr3	121783013	121783014	chr3:121783014:C:T	rs6438662	C	T	T	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr3	121809538	121809539	chr3:121809539:G:A	rs6438669	G	A	A	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr3	121825393	121825394	chr3:121825394:T:C	rs79488379	T	C	T	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr3	121926443	121926444	chr3:121926444:T:C	rs2689288	T	C	C	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr3	121996584	121996585	chr3:121996585:T:C	rs2332035	T	C	C	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr3	122308214	122308215	chr3:122308215:G:A	rs16833000	G	A	G	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr3	122937471	122937472	chr3:122937472:G:A	rs79226962	G	A	G	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr3	122940981	122940982	chr3:122940982:A:G	rs10934622	A	G	A	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr3	122956358	122956359	chr3:122956359:C:T	rs11915280	C	T	C	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr3	123085531	123085532	chr3:123085532:C:T	rs12489722	C	T	C	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr3	123085536	123085537	chr3:123085537:G:A	rs148177709	G	A	g	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr3	123195321	123195322	chr3:123195322:T:G	rs13064484	T	G	T	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr3	123582394	123582395	chr3:123582395:C:G	rs820469	C	G	G	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr3	123661169	123661170	chr3:123661170:C:T	rs115548947	C	T	C	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr3	123779219	123779220	chr3:123779220:G:A	rs1053767012	G	A	G	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr3	123802732	123802733	chr3:123802733:C:T	rs77717129	C	T	C	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr3	123881085	123881086	chr3:123881086:G:A	rs72974257	G	A	G	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr3	124134480	124134481	chr3:124134481:C:T	rs112605596	C	T	C	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr3	124352391	124352392	chr3:124352392:T:G	rs6772915	T	G	G	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr3	124837370	124837371	chr3:124837371:G:A	rs75471351	G	A	G	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr3	124858553	124858554	chr3:124858554:A:G	rs60485388	A	G	A	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr3	124951779	124951780	chr3:124951780:C:A	rs28398387	C	A	C	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr3	125127411	125127412	chr3:125127412:T:C	rs9868033	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.522691831404475	6.188613231541982	CCCATAAAG
chr3	125169164	125169165	chr3:125169165:T:C	rs1767087	T	C	T	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr3	125205686	125205687	chr3:125205687:C:T	rs816344	C	T	T	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr3	125309804	125309805	chr3:125309805:C:T	rs4679382	C	T	T	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr3	125764759	125764760	chr3:125764760:T:C	rs200107955	T	C	.	Hoxd9.mouse_homeodomain_1	3	1	-	7.889898683853121	6.555820083990628	ACCATAAAA
chr3	125950962	125950963	chr3:125950963:T:G	rs1847249	T	G	t	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr3	125961205	125961206	chr3:125961206:G:C	rs10934738	G	C	c	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr3	126039388	126039389	chr3:126039389:A:C	rs1112001	A	C	A	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr3	126086190	126086191	chr3:126086191:G:C	rs1130056	G	C	C	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr3	126092141	126092142	chr3:126092142:G:C	rs2365016	G	C	C	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr3	126301175	126301176	chr3:126301176:T:C	rs188754979	T	C	T	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr3	126339705	126339706	chr3:126339706:A:T	rs938390	A	T	t	Hoxd9.mouse_homeodomain_1	6	1	+	8.287463081002919	5.398047310972334	CCAATAAAA
chr3	126479358	126479359	chr3:126479359:A:G	rs777510	A	G	A	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr3	126531595	126531596	chr3:126531596:T:G	rs11918048	T	G	T	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr3	126543248	126543249	chr3:126543249:G:C	rs1054097	G	C	G	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr3	126678642	126678643	chr3:126678643:C:G	rs73199851	C	G	C	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr3	126961870	126961871	chr3:126961871:C:T	rs55901261	C	T	C	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr3	126961875	126961876	chr3:126961876:A:G	rs4679314	A	G	A	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr3	127157276	127157277	chr3:127157277:C:T	rs75844433	C	T	C	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr3	127173332	127173333	chr3:127173333:G:A	rs141604537	G	A	G	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr3	127193078	127193079	chr3:127193079:C:G	rs11707248	C	G	C	Hoxd9.mouse_homeodomain_1	2	1	+	7.654940340027237	4.186948682574907	CCCGTAAAA
chr3	127193079	127193080	chr3:127193080:G:A	rs79608224	G	A	G	Hoxd9.mouse_homeodomain_1	3	1	+	7.654940340027237	8.98901893988973	CCCGTAAAA
chr3	127204917	127204918	chr3:127204918:C:G	rs13060591	C	G	C	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr3	127216417	127216418	chr3:127216418:G:A	rs35423378	G	A	G	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr3	127324851	127324852	chr3:127324852:G:A	rs2002037	G	A	-	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr3	127343211	127343212	chr3:127343212:C:T	rs73192847	C	T	C	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr3	127394468	127394469	chr3:127394469:G:A	rs4679157	G	A	G	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr3	127425182	127425183	chr3:127425183:C:G	rs73196826	C	G	C	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr3	127425187	127425188	chr3:127425188:A:T	rs10934814	A	T	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.678783717710262	6.675302580901619	GCCATAAAA
chr3	127457747	127457748	chr3:127457748:A:G	rs77826798	A	G	a	Hoxd9.mouse_homeodomain_1	6	1	+	8.287463081002919	1.5836371344111884	CCAATAAAA
chr3	127681662	127681663	chr3:127681663:T:G	rs6414309	T	G	G	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr3	127681694	127681695	chr3:127681695:G:A	rs116524295	G	A	G	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr3	127747137	127747138	chr3:127747138:G:C	rs13064150	G	C	G	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr3	127843230	127843231	chr3:127843231:A:G	rs36067954	A	G	A	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr3	127887229	127887230	chr3:127887230:C:T	rs75826566	C	T	c	Hoxd9.mouse_homeodomain_1	6	1	+	7.241935125048919	6.099603169859144	CCCATACAA
chr3	127955337	127955338	chr3:127955338:G:A	rs116661419	G	A	G	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr3	127997741	127997742	chr3:127997742:A:G	rs9870753	A	G	G	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr3	128783605	128783606	chr3:128783606:T:C	rs1276175317	T	C	T	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr3	128925171	128925172	chr3:128925172:T:C	rs2630257	T	C	C	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr3	128925210	128925211	chr3:128925211:T:A	rs551252599	T	A	T	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr3	129122808	129122809	chr3:129122809:G:A	rs6779660	G	A	G	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr3	129122814	129122815	chr3:129122815:A:G	rs146388447	A	G	A	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr3	129235515	129235516	chr3:129235516:T:A	rs62266862	T	A	T	Hoxd9.mouse_homeodomain_1	7	1	-	7.1462160923678635	5.399132277527052	GCCATAAAC
chr3	129442060	129442061	chr3:129442061:G:A	rs535569966	G	A	G	Hoxd9.mouse_homeodomain_1	0	1	-	8.027213970992095	6.132666665683155	CACATAAAA
chr3	129442079	129442080	chr3:129442080:A:T	rs189621493	A	T	A	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr3	129485324	129485325	chr3:129485325:G:C	rs188124643	G	C	G	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr3	130109523	130109524	chr3:130109524:G:A	rs759486682	G	A	g	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr3	130179404	130179405	chr3:130179405:C:T	rs2624616	C	T	c	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr3	131324716	131324717	chr3:131324717:T:C	rs77898083	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.889898683853121	6.555820083990628	ACCATAAAA
chr3	131411195	131411196	chr3:131411196:C:T	rs12493105	C	T	C	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr3	131591747	131591748	chr3:131591748:C:A	rs73874151	C	A	A	Hoxd9.mouse_homeodomain_1	1	1	+	8.287463081002919	7.325658112105286	CCAATAAAA
chr3	131631166	131631167	chr3:131631167:C:A	rs61636257	C	A	C	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr3	132196060	132196061	chr3:132196061:G:A	rs372590275	G	A	T	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr3	132354117	132354118	chr3:132354118:C:G	rs17242260	C	G	C	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr3	132354480	132354481	chr3:132354481:G:A	rs62291051	G	A	A	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr3	132477516	132477517	chr3:132477517:C:T	rs62292949	C	T	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.34470511784777	8.678783717710262	GCCGTAAAA
chr3	132706084	132706085	chr3:132706085:C:T	rs9842176	C	T	C	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr3	132731186	132731187	chr3:132731187:G:A	rs576311095	G	A	G	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr3	132732193	132732194	chr3:132732194:A:G	rs9811369	A	G	G	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr3	132879468	132879469	chr3:132879469:A:G	rs74922154	A	G	A	Hoxd9.mouse_homeodomain_1	8	1	+	8.678783717710262	7.212456609225008	GCCATAAAA
chr3	133090221	133090222	chr3:133090222:G:T	rs2840157	G	T	G	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr3	133264705	133264706	chr3:133264706:A:G	rs113775924	A	G	A	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr3	133363067	133363068	chr3:133363068:C:G	rs13097026	C	G	C	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr3	133492044	133492045	chr3:133492045:T:C	rs6439412	T	C	C	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr3	133764348	133764349	chr3:133764349:T:C	rs8177274	T	C	C	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr3	133822038	133822039	chr3:133822039:C:T	rs17376019	C	T	C	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr3	133940594	133940595	chr3:133940595:T:G	rs3923835	T	G	T	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr3	134007957	134007958	chr3:134007958:G:C	rs72980397	G	C	G	Hoxd9.mouse_homeodomain_1	2	1	-	8.027213970992095	4.559222313539767	CACATAAAA
chr3	134062144	134062145	chr3:134062145:C:T	rs4370029	C	T	T	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr3	134344899	134344900	chr3:134344900:C:T	rs4974496	C	T	T	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr3	134353569	134353570	chr3:134353570:T:C	rs147133446	T	C	T	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr3	134377037	134377038	chr3:134377038:A:G	rs144924397	A	G	A	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr3	134601539	134601540	chr3:134601540:C:T	rs140412989	C	T	C	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr3	134751957	134751958	chr3:134751958:C:T	rs1807299	C	T	C	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr3	134848611	134848612	chr3:134848612:C:G	rs2292659	C	G	C	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr3	134855876	134855877	chr3:134855877:G:A	rs12489360	G	A	A	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr3	134963790	134963791	chr3:134963791:G:A	rs936323	G	A	A	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr3	135040955	135040956	chr3:135040956:C:A	rs73864233	C	A	C	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr3	135078128	135078129	chr3:135078129:C:T	rs534865387	C	T	C	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr3	135624811	135624812	chr3:135624812:G:A	rs1374769	G	A	G	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr3	136249589	136249590	chr3:136249590:C:T	rs116886712	C	T	C	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr3	136751438	136751439	chr3:136751439:G:A	rs537074222	G	A	G	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr3	136751474	136751475	chr3:136751475:G:A	rs61790842	G	A	G	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr3	137705046	137705047	chr3:137705047:C:G	rs562284549	C	G	C	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr3	138068908	138068909	chr3:138068909:G:A	rs751533057	G	A	G	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr3	138347911	138347912	chr3:138347912:G:A	rs114750329	G	A	G	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr3	138347934	138347935	chr3:138347935:T:G	rs540148740	T	G	T	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr3	138478982	138478983	chr3:138478983:C:T	rs78680056	C	T	C	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr3	138630854	138630855	chr3:138630855:G:T	rs553399307	G	T	G	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr3	138795818	138795819	chr3:138795819:C:T	rs9834963	C	T	T	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr3	138830166	138830167	chr3:138830167:A:G	rs2881900	A	G	G	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr3	139292133	139292134	chr3:139292134:C:T	rs574778021	C	T	C	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr3	140020936	140020937	chr3:140020937:T:G	rs9844385	T	G	T	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr3	140123589	140123590	chr3:140123590:T:G	rs35593784	T	G	T	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr3	140637068	140637069	chr3:140637069:A:C	rs1690863	A	C	C	Hoxd9.mouse_homeodomain_1	4	1	-	8.027213970992095	1.1853955236614904	CACATAAAA
chr3	140739941	140739942	chr3:140739942:G:C	rs9857550	G	C	C	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr3	140913018	140913019	chr3:140913019:T:G	rs7624649	T	G	c	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr3	141280115	141280116	chr3:141280116:G:C	rs57758275	G	C	G	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr3	141280141	141280142	chr3:141280142:G:A	rs75805757	G	A	G	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr3	141288279	141288280	chr3:141288280:T:C	rs6791988	T	C	T	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr3	141311630	141311631	chr3:141311631:G:A	rs75285140	G	A	G	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr3	141312545	141312546	chr3:141312546:T:G	rs934023491	T	G	T	Hoxd9.mouse_homeodomain_1	7	1	-	8.678783717710262	5.789367947679677	GCCATAAAA
chr3	141312571	141312572	chr3:141312572:A:G	rs72632315	A	G	A	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr3	141370355	141370356	chr3:141370356:G:A	rs951234803	G	A	G	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr3	141370501	141370502	chr3:141370502:C:T	rs79119624	C	T	C	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr3	141377373	141377374	chr3:141377374:C:T	rs74734425	C	T	C	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr3	141377419	141377420	chr3:141377420:T:C	rs566686280	T	C	T	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr3	141388111	141388112	chr3:141388112:A:T	rs13077048	A	T	a	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr3	141388112	141388113	chr3:141388113:A:T	rs73872710	A	T	A	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr3	141811967	141811968	chr3:141811968:G:A	rs4683625	G	A	A	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr3	141895993	141895994	chr3:141895994:G:A	rs76271811	G	A	G	Hoxd9.mouse_homeodomain_1	1	1	-	8.98901893988973	7.674217025556723	CCCATAAAA
chr3	141907156	141907157	chr3:141907157:G:C	rs7622417	G	C	C	Hoxd9.mouse_homeodomain_1	2	1	-	7.716978748812629	4.248987091360299	GACATAAAA
chr3	141925965	141925966	chr3:141925966:G:T	rs1050190	G	T	G	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr3	141998849	141998850	chr3:141998850:A:G	chr3:141998850:A:G	A	G	A	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr3	142495469	142495470	chr3:142495470:C:T	rs7431811	C	T	C	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr3	142597193	142597194	chr3:142597194:A:G	rs6440093	A	G	G	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr3	142597600	142597601	chr3:142597601:C:T	rs6440094	C	T	T	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr3	142613792	142613793	chr3:142613793:C:G	rs28709617	C	G	C	Hoxd9.mouse_homeodomain_1	0	1	-	7.9772278588234515	8.287463081002919	GCAATAAAA
chr3	142691934	142691935	chr3:142691935:A:C	rs7650047	A	C	G	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr3	143143156	143143157	chr3:143143157:T:C	rs531148315	T	C	T	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr3	143238164	143238165	chr3:143238165:T:C	rs17470719	T	C	C	Hoxd9.mouse_homeodomain_1	4	1	+	7.45645131454733	4.801404669684752	CCCATAAAC
chr3	143239431	143239432	chr3:143239432:T:C	rs77957174	T	C	t	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr3	143659047	143659048	chr3:143659048:G:A	rs73152850	G	A	G	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr3	143784227	143784228	chr3:143784228:A:G	rs746351	A	G	G	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr3	144142642	144142643	chr3:144142643:C:T	rs191749550	C	T	C	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr3	144257538	144257539	chr3:144257539:C:T	rs6777547	C	T	T	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr3	144273787	144273788	chr3:144273788:T:C	rs6763060	T	C	.	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr3	144560456	144560457	chr3:144560457:T:A	rs77427247	T	A	T	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr3	144561237	144561238	chr3:144561238:T:C	rs2717392	T	C	C	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr3	144630204	144630205	chr3:144630205:G:A	rs708479	G	A	A	Hoxd9.mouse_homeodomain_1	0	1	+	8.678783717710262	7.889898683853121	GCCATAAAA
chr3	145209707	145209708	chr3:145209708:G:A	rs9875413	G	A	g	Hoxd9.mouse_homeodomain_1	3	1	+	7.34470511784777	8.678783717710262	GCCGTAAAA
chr3	145277684	145277685	chr3:145277685:T:C	rs62274798	T	C	T	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr3	145435243	145435244	chr3:145435244:T:A	rs6806188	T	A	T	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr3	145657758	145657759	chr3:145657759:C:T	rs9832507	C	T	T	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr3	145698410	145698411	chr3:145698411:T:C	chr3:145698411:T:C	T	C	T	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr3	145762117	145762118	chr3:145762118:C:T	rs17615724	C	T	C	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr3	145771029	145771030	chr3:145771030:T:G	rs112956163	T	G	G	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr3	145798441	145798442	chr3:145798442:T:C	rs6796627	T	C	C	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr3	145798672	145798673	chr3:145798673:C:A	rs115672218	C	A	c	Hoxd9.mouse_homeodomain_1	6	1	+	7.241935125048919	8.98901893988973	CCCATACAA
chr3	145896047	145896048	chr3:145896048:A:C	rs7620607	A	C	C	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr3	145981315	145981316	chr3:145981316:A:G	rs35337132	A	G	A	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr3	146013295	146013296	chr3:146013296:A:G	rs6795661	A	G	A	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr3	146106325	146106326	chr3:146106326:T:C	rs9289715	T	C	T	Hoxd9.mouse_homeodomain_1	4	1	+	7.212456609225008	4.557409964362429	GCCATAAAG
chr3	146153167	146153168	chr3:146153168:C:T	rs11717610	C	T	C	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr3	146156939	146156940	chr3:146156940:C:T	rs67325724	C	T	C	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr3	146339498	146339499	chr3:146339499:T:G	rs1008426902	T	G	T	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr3	146498514	146498515	chr3:146498515:A:G	rs113410273	A	G	A	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr3	146498557	146498558	chr3:146498558:C:T	rs518330	C	T	T	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr3	146681329	146681330	chr3:146681330:T:G	rs6804783	T	G	G	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr3	146681412	146681413	chr3:146681413:A:G	rs6767674	A	G	G	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr3	146803962	146803963	chr3:146803963:C:A	chr3:146803963:C:A	C	A	C	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr3	146836255	146836256	chr3:146836256:G:A	rs73162836	G	A	G	Hoxd9.mouse_homeodomain_1	1	1	-	8.409487817756228	7.094685903423221	CCCATTAAA
chr3	146838303	146838304	chr3:146838304:A:G	rs1608002	A	G	A	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr3	146913236	146913237	chr3:146913237:C:A	rs16858951	C	A	C	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr3	147117394	147117395	chr3:147117395:C:T	rs9289738	C	T	C	Hoxd9.mouse_homeodomain_1	2	1	+	7.716978748812629	1.2295382911889927	GACATAAAA
chr3	147143183	147143184	chr3:147143184:G:T	rs74978039	G	T	C	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr3	147401952	147401953	chr3:147401953:C:T	rs75136694	C	T	C	Hoxd9.mouse_homeodomain_1	1	1	+	8.099252595576761	6.784450681243753	GCCATTAAA
chr3	147414803	147414804	chr3:147414804:A:T	rs76310462	A	T	A	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr3	147761695	147761696	chr3:147761696:G:A	rs9815676	G	A	A	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr3	148214968	148214969	chr3:148214969:C:G	rs963780	C	G	G	Hoxd9.mouse_homeodomain_1	8	1	-	7.212456609225008	7.1462160923678635	GCCATAAAG
chr3	148223475	148223476	chr3:148223476:A:G	rs66568012	A	G	G	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr3	148502317	148502318	chr3:148502318:C:T	rs987558	C	T	T	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr3	148756585	148756586	chr3:148756586:T:C	rs2934121	T	C	T	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr3	148763460	148763461	chr3:148763461:G:A	rs6772419	G	A	G	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr3	148808083	148808084	chr3:148808084:T:C	rs7645181	T	C	T	Hoxd9.mouse_homeodomain_1	5	1	-	8.678783717710262	2.304593999463707	GCCATAAAA
chr3	148847477	148847478	chr3:148847478:C:T	rs6801396	C	T	C	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr3	148897836	148897837	chr3:148897837:T:C	rs4681456	T	C	T	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr3	148964868	148964869	chr3:148964869:G:A	rs79477720	G	A	G	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr3	149152044	149152045	chr3:149152045:G:A	rs13094132	G	A	G	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr3	149354133	149354134	chr3:149354134:T:C	rs6440600	T	C	T	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr3	149354169	149354170	chr3:149354170:T:C	rs7634116	T	C	C	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr3	149469216	149469217	chr3:149469217:C:T	rs11927441	C	T	C	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr3	149554569	149554570	chr3:149554570:C:T	rs16861987	C	T	C	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr3	149656606	149656607	chr3:149656607:C:T	rs11924280	C	T	.	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr3	149814352	149814353	chr3:149814353:G:T	rs73870432	G	T	T	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr3	150059484	150059485	chr3:150059485:C:T	rs4681564	C	T	T	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr3	150130372	150130373	chr3:150130373:G:C	rs73009846	G	C	G	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr3	150271428	150271429	chr3:150271429:A:G	rs999977094	A	G	A	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr3	150278574	150278575	chr3:150278575:T:C	rs114061366	T	C	T	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr3	150278915	150278916	chr3:150278916:A:G	rs13095267	A	G	A	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr3	150521670	150521671	chr3:150521671:C:T	rs4234379	C	T	C	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr3	150521699	150521700	chr3:150521700:C:G	rs116477502	C	G	C	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr3	150594310	150594311	chr3:150594311:C:A	rs9865783	C	A	C	Hoxd9.mouse_homeodomain_1	1	1	+	7.522691831404475	6.560886862506841	CCCATAAAG
chr3	150599166	150599167	chr3:150599167:G:C	rs1915943	G	C	G	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr3	150699837	150699838	chr3:150699838:A:T	chr3:150699838:A:T	A	T	A	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr3	150721692	150721693	chr3:150721693:T:C	chr3:150721693:T:C	T	C	T	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr3	150756870	150756871	chr3:150756871:T:C	rs79220446	T	C	T	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr3	150958855	150958856	chr3:150958856:A:G	rs114871519	A	G	A	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr3	150975537	150975538	chr3:150975538:C:G	rs996838	C	G	G	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr3	151216529	151216530	chr3:151216530:A:G	rs1920397	A	G	G	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr3	151317373	151317374	chr3:151317374:A:G	rs77876805	A	G	A	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr3	151477889	151477890	chr3:151477890:G:A	rs4680465	G	A	G	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr3	151499361	151499362	chr3:151499362:C:T	rs12152213	C	T	C	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr3	151604902	151604903	chr3:151604903:A:G	rs59939345	A	G	A	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr3	151770376	151770377	chr3:151770377:T:A	rs79357556	T	A	T	Hoxd9.mouse_homeodomain_1	6	1	-	7.212456609225008	4.323040839194422	GCCATAAAG
chr3	151770384	151770385	chr3:151770385:G:A	rs78046150	G	A	G	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr3	151770402	151770403	chr3:151770403:A:T	rs79328322	A	T	A	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr3	151845364	151845365	chr3:151845365:C:T	rs73869701	C	T	C	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr3	152243146	152243147	chr3:152243147:T:G	rs323618	T	G	G	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr3	152243303	152243304	chr3:152243304:T:C	rs6808030	T	C	T	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr3	152260396	152260397	chr3:152260397:C:A	rs323623	C	A	C	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr3	152313313	152313314	chr3:152313314:C:T	rs73154162	C	T	C	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr3	152313327	152313328	chr3:152313328:T:C	rs77341204	T	C	T	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr3	152359835	152359836	chr3:152359836:A:G	rs2055355	A	G	A	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr3	152385902	152385903	chr3:152385903:T:G	rs1041785082	T	G	T	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr3	152500070	152500071	chr3:152500071:T:A	rs13067500	T	A	T	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr3	152526093	152526094	chr3:152526094:G:T	rs1299209	G	T	G	Hoxd9.mouse_homeodomain_1	2	1	-	7.889898683853121	7.188342824966311	ACCATAAAA
chr3	152639058	152639059	chr3:152639059:A:G	rs1914352	A	G	A	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr3	152656201	152656202	chr3:152656202:T:C	rs1517237	T	C	T	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr3	152828805	152828806	chr3:152828806:A:G	rs1439010	A	G	G	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr3	153000795	153000796	chr3:153000796:G:C	rs4680030	G	C	G	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr3	153282098	153282099	chr3:153282099:C:T	rs72995464	C	T	C	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr3	153377127	153377128	chr3:153377128:A:G	rs9853186	A	G	g	Hoxd9.mouse_homeodomain_1	4	1	-	8.027213970992095	5.372167326129518	CACATAAAA
chr3	153401059	153401060	chr3:153401060:G:A	rs4680059	G	A	A	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr3	153669669	153669670	chr3:153669670:C:T	rs12637975	C	T	C	Hoxd9.mouse_homeodomain_1	2	1	+	7.075409217893736	0.5879687602700975	CCCGTTAAA
chr3	153731290	153731291	chr3:153731291:C:T	rs579695	C	T	C	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr3	153731297	153731298	chr3:153731298:A:C	rs76951511	A	C	A	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr3	153740310	153740311	chr3:153740311:T:C	rs1024462492	T	C	T	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr3	153753671	153753672	chr3:153753672:T:C	rs567326	T	C	T	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr3	154009853	154009854	chr3:154009854:T:C	rs6790292	T	C	.	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr3	154193205	154193206	chr3:154193206:C:T	rs400529	C	T	C	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr3	155219004	155219005	chr3:155219005:G:A	rs7432681	G	A	G	Hoxd9.mouse_homeodomain_1	2	1	-	7.889898683853121	1.4024582262294842	ACCATAAAA
chr3	155313850	155313851	chr3:155313851:A:G	rs115328377	A	G	A	Hoxd9.mouse_homeodomain_1	8	1	+	8.98901893988973	7.522691831404475	CCCATAAAA
chr3	155342210	155342211	chr3:155342211:C:A	rs1018912821	C	A	C	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr3	155520475	155520476	chr3:155520476:C:T	rs6440994	C	T	T	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr3	155628593	155628594	chr3:155628594:T:G	rs9818926	T	G	G	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr3	155666679	155666680	chr3:155666680:G:T	rs4680210	G	T	T	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr3	155703703	155703704	chr3:155703704:A:G	rs768754594	A	G	A	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr3	156159049	156159050	chr3:156159050:C:T	rs115839040	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	-	7.1462160923678635	6.357331058510722	GCCATAAAC
chr3	156371849	156371850	chr3:156371850:A:G	rs147244882	A	G	A	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr3	156371856	156371857	chr3:156371857:C:T	chr3:156371857:C:T	C	T	C	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr3	156534923	156534924	chr3:156534924:T:A	rs191579962	T	A	T	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr3	156605245	156605246	chr3:156605246:A:G	rs73875732	A	G	A	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr3	156618765	156618766	chr3:156618766:C:T	rs7651778	C	T	C	Hoxd9.mouse_homeodomain_1	1	1	+	8.099252595576761	6.784450681243753	GCCATTAAA
chr3	157031545	157031546	chr3:157031546:T:C	rs10936055	T	C	T	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr3	157093184	157093185	chr3:157093185:A:C	rs6798146	A	C	A	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr3	157104716	157104717	chr3:157104717:C:T	rs11928575	C	T	C	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr3	157107756	157107757	chr3:157107757:G:A	rs2321535	G	A	A	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr3	157249405	157249406	chr3:157249406:A:G	rs4680348	A	G	G	Hoxd9.mouse_homeodomain_1	2	1	+	8.287463081002919	5.5210272824374	CCAATAAAA
chr3	157753095	157753096	chr3:157753096:C:T	rs4062228	C	T	C	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr3	158793113	158793114	chr3:158793114:T:G	rs61796764	T	G	T	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr3	158847716	158847717	chr3:158847717:T:C	rs142230381	T	C	T	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr3	159366691	159366692	chr3:159366692:T:C	rs192289974	T	C	T	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr3	159757721	159757722	chr3:159757722:A:T	rs9831658	A	T	A	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr3	159829749	159829750	chr3:159829750:C:T	rs13093643	C	T	C	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr3	159879491	159879492	chr3:159879492:T:A	rs7651948	T	A	A	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr3	159929627	159929628	chr3:159929628:A:G	rs75667418	A	G	A	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr3	160126158	160126159	chr3:160126159:C:G	rs140812256	C	G	C	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr3	160180979	160180980	chr3:160180980:C:A	rs77961352	C	A	A	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr3	160661883	160661884	chr3:160661884:A:G	rs4679910	A	G	G	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr3	160667675	160667676	chr3:160667676:A:C	rs80077124	A	C	A	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr3	160797009	160797010	chr3:160797010:T:C	chr3:160797010:T:C	T	C	T	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr3	160878447	160878448	chr3:160878448:T:C	rs11922296	T	C	C	Hoxd9.mouse_homeodomain_1	8	1	-	8.678783717710262	7.212456609225008	GCCATAAAA
chr3	161008116	161008117	chr3:161008117:A:G	rs58189630	A	G	A	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr3	161026782	161026783	chr3:161026783:T:G	rs898677	T	G	G	Hoxd9.mouse_homeodomain_1	7	1	-	8.099252595576761	5.209836825546175	GCCATTAAA
chr3	161222477	161222478	chr3:161222478:C:T	rs78710377	C	T	c	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr3	161358642	161358643	chr3:161358643:T:C	rs336593	T	C	C	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr3	161991147	161991148	chr3:161991148:G:T	rs4241432	G	T	T	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr3	162217812	162217813	chr3:162217813:G:A	rs9836187	G	A	A	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr3	162217824	162217825	chr3:162217825:G:A	rs78287994	G	A	G	Hoxd9.mouse_homeodomain_1	2	1	-	8.678783717710262	2.1913432600866263	GCCATAAAA
chr3	162365218	162365219	chr3:162365219:T:G	rs13100275	T	G	T	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr3	162368244	162368245	chr3:162368245:G:A	rs12486096	G	A	G	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr3	162626204	162626205	chr3:162626205:A:G	rs17757752	A	G	A	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr3	162665342	162665343	chr3:162665343:T:G	rs2361605	T	G	t	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr3	162665348	162665349	chr3:162665349:G:A	rs2361606	G	A	G	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr3	163544193	163544194	chr3:163544194:A:G	rs141203007	A	G	a	Hoxd9.mouse_homeodomain_1	3	1	+	8.409487817756228	7.075409217893736	CCCATTAAA
chr3	164338469	164338470	chr3:164338470:C:T	rs35816258	C	T	C	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr3	164416930	164416931	chr3:164416931:C:T	rs7651057	C	T	C	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr3	164522055	164522056	chr3:164522056:G:A	rs73159370	G	A	G	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr3	164641869	164641870	chr3:164641870:G:T	rs964748	G	T	T	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr3	164686257	164686258	chr3:164686258:G:A	rs183412153	G	A	G	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr3	165078554	165078555	chr3:165078555:T:C	rs7629658	T	C	C	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr3	165111635	165111636	chr3:165111636:T:G	rs150413356	T	G	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.9772278588234515	1.40171975461997	GCAATAAAA
chr3	165464691	165464692	chr3:165464692:A:G	rs62293358	A	G	A	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr3	165696761	165696762	chr3:165696762:G:A	rs932174502	G	A	G	Hoxd9.mouse_homeodomain_1	8	1	+	7.212456609225008	8.678783717710262	GCCATAAAG
chr3	166234508	166234509	chr3:166234509:A:G	rs9855808	A	G	G	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr3	166362053	166362054	chr3:166362054:T:C	rs74588060	T	C	T	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr3	166491056	166491057	chr3:166491057:T:C	rs116591601	T	C	T	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr3	166565018	166565019	chr3:166565019:A:G	rs16850752	A	G	A	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr3	167116834	167116835	chr3:167116835:C:T	rs115462404	C	T	C	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr3	167304701	167304702	chr3:167304702:C:T	rs4629333	C	T	T	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr3	167431403	167431404	chr3:167431404:C:T	rs72622523	C	T	C	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr3	167942552	167942553	chr3:167942553:A:G	rs28505972	A	G	a	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr3	168036131	168036132	chr3:168036132:G:C	rs6444791	G	C	C	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr3	168088041	168088042	chr3:168088042:T:C	rs55722269	T	C	c	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr3	168155564	168155565	chr3:168155565:C:T	rs146233927	C	T	C	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr3	168214297	168214298	chr3:168214298:A:G	rs3851395	A	G	A	Hoxd9.mouse_homeodomain_1	4	1	-	8.98901893988973	6.333972295027152	CCCATAAAA
chr3	168220099	168220100	chr3:168220100:G:T	rs7624807	G	T	T	Hoxd9.mouse_homeodomain_1	2	1	-	7.716978748812629	7.0154228899258175	GACATAAAA
chr3	168271848	168271849	chr3:168271849:A:G	rs35017731	A	G	A	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr3	168885138	168885139	chr3:168885139:T:A	rs9882423	T	A	T	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr3	169026459	169026460	chr3:169026460:T:C	rs1544660	T	C	T	Hoxd9.mouse_homeodomain_1	4	1	+	8.027213970992095	5.372167326129518	CACATAAAA
chr3	169041685	169041686	chr3:169041686:T:C	rs147574826	T	C	T	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr3	169045110	169045111	chr3:169045111:G:C	rs1420457	G	C	C	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr3	169218113	169218114	chr3:169218114:G:T	rs11707805	G	T	G	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr3	169249985	169249986	chr3:169249986:A:G	rs141686554	A	G	A	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr3	169289404	169289405	chr3:169289405:A:G	rs6794473	A	G	A	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr3	169382328	169382329	chr3:169382329:G:A	rs16853620	G	A	G	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr3	169940754	169940755	chr3:169940755:C:T	rs1990803	C	T	C	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr3	170270497	170270498	chr3:170270498:C:T	rs56257047	C	T	C	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr3	170327921	170327922	chr3:170327922:T:A	rs6772875	T	A	T	Hoxd9.mouse_homeodomain_1	1	1	-	7.716978748812629	7.363981803377255	GACATAAAA
chr3	170343840	170343841	chr3:170343841:T:C	rs6444912	T	C	T	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr3	170359924	170359925	chr3:170359925:A:G	rs3772172	A	G	A	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr3	170423500	170423501	chr3:170423501:G:A	rs76073630	G	A	G	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr3	170695953	170695954	chr3:170695954:G:A	rs147998724	G	A	G	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr3	170908953	170908954	chr3:170908954:A:G	rs181881707	A	G	A	Hoxd9.mouse_homeodomain_1	5	1	-	8.409487817756228	7.091711387329735	CCCATTAAA
chr3	171045488	171045489	chr3:171045489:C:A	rs191055026	C	A	C	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr3	171283331	171283332	chr3:171283332:C:T	rs4894745	C	T	T	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr3	171389839	171389840	chr3:171389840:G:A	rs11716511	G	A	A	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr3	171438085	171438086	chr3:171438086:C:T	rs6444989	C	T	C	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr3	171508944	171508945	chr3:171508945:A:C	rs7432629	A	C	A	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr3	171606698	171606699	chr3:171606699:A:G	rs79154065	A	G	A	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr3	171825850	171825851	chr3:171825851:A:G	rs56046143	A	G	A	Hoxd9.mouse_homeodomain_1	7	1	+	8.027213970992095	1.3233880244003648	CACATAAAA
chr3	171828937	171828938	chr3:171828938:G:A	rs960069137	G	A	G	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr3	171834677	171834678	chr3:171834678:G:A	rs17420359	G	A	G	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr3	171873770	171873771	chr3:171873771:G:T	rs78063613	G	T	T	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr3	171873771	171873772	chr3:171873772:A:G	rs78458046	A	G	G	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr3	171983334	171983335	chr3:171983335:C:T	rs73038138	C	T	C	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr3	172039583	172039584	chr3:172039584:A:T	rs1033375961	A	T	A	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr3	172104155	172104156	chr3:172104156:T:C	rs58613198	T	C	T	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr3	172169074	172169075	chr3:172169075:A:G	rs62283840	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	7.716978748812629	6.382900148950135	GACATAAAA
chr3	172197423	172197424	chr3:172197424:T:C	rs7640569	T	C	T	Hoxd9.mouse_homeodomain_1	4	1	+	7.45645131454733	4.801404669684752	CCCATAAAC
chr3	172316559	172316560	chr3:172316560:T:C	rs4894416	T	C	T	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr3	172537274	172537275	chr3:172537275:A:G	rs16845798	A	G	G	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr3	172546937	172546938	chr3:172546938:T:C	rs111703587	T	C	T	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr3	172555944	172555945	chr3:172555945:C:A	rs231996	C	A	A	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr3	172638908	172638909	chr3:172638909:T:C	rs3932352	T	C	T	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr3	172699082	172699083	chr3:172699083:C:A	rs602528	C	A	A	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr3	172708136	172708137	chr3:172708137:G:A	rs374731295	G	A	G	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr3	172820559	172820560	chr3:172820560:C:T	rs4331694	C	T	C	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr3	172892627	172892628	chr3:172892628:G:A	rs147923630	G	A	G	Hoxd9.mouse_homeodomain_1	2	1	-	7.716978748812629	1.2295382911889927	GACATAAAA
chr3	172947581	172947582	chr3:172947582:G:A	rs9821464	G	A	A	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr3	173617536	173617537	chr3:173617537:G:A	rs3913565	G	A	A	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr3	173993130	173993131	chr3:173993131:C:T	rs190797012	C	T	C	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr3	174440721	174440722	chr3:174440722:C:T	rs67154032	C	T	C	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr3	174495397	174495398	chr3:174495398:G:A	rs938441	G	A	A	Hoxd9.mouse_homeodomain_1	1	1	-	8.409487817756228	7.094685903423221	CCCATTAAA
chr3	174853687	174853688	chr3:174853688:A:T	rs10454772	A	T	a	Hoxd9.mouse_homeodomain_1	5	1	+	7.9772278588234515	7.39769673668995	GCAATAAAA
chr3	174973833	174973834	chr3:174973834:C:A	rs57388694	C	A	C	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr3	175573421	175573422	chr3:175573422:A:C	rs62285565	A	C	A	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr3	175601617	175601618	chr3:175601618:T:C	rs114246045	T	C	T	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr3	175601648	175601649	chr3:175601649:A:G	rs13063406	A	G	A	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr3	175697350	175697351	chr3:175697351:T:C	rs77440592	T	C	T	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr3	175743303	175743304	chr3:175743304:A:G	rs62286110	A	G	A	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr3	175770798	175770799	chr3:175770799:T:C	rs1931156	T	C	C	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr3	175899488	175899489	chr3:175899489:A:G	rs2862347	A	G	G	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr3	175941541	175941542	chr3:175941542:T:C	chr3:175941542:T:C	T	C	T	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr3	176891460	176891461	chr3:176891461:G:A	rs7649659	G	A	G	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr3	176905445	176905446	chr3:176905446:A:G	rs9846933	A	G	A	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr3	176956997	176956998	chr3:176956998:A:T	rs6443421	A	T	T	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr3	176988627	176988628	chr3:176988628:G:A	rs59401298	G	A	g	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr3	177178034	177178035	chr3:177178035:C:T	rs12486184	C	T	C	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr3	177421122	177421123	chr3:177421123:G:A	rs35435237	G	A	G	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr3	177589898	177589899	chr3:177589899:G:A	rs12486647	G	A	G	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr3	177615009	177615010	chr3:177615010:A:C	rs17633438	A	C	A	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr3	177624679	177624680	chr3:177624680:T:C	rs1875102	T	C	C	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr3	177665484	177665485	chr3:177665485:G:A	rs13088555	G	A	G	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr3	177688275	177688276	chr3:177688276:A:G	rs6803889	A	G	G	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr3	177770991	177770992	chr3:177770992:C:T	rs6443505	C	T	C	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr3	177772479	177772480	chr3:177772480:G:A	rs1106387	G	A	G	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr3	177835255	177835256	chr3:177835256:G:A	rs77175887	G	A	G	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr3	177837998	177837999	chr3:177837999:A:G	rs13321743	A	G	A	Hoxd9.mouse_homeodomain_1	7	1	+	8.98901893988973	2.285192993297999	CCCATAAAA
chr3	177976542	177976543	chr3:177976543:A:G	chr3:177976543:A:G	A	G	A	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr3	177976573	177976574	chr3:177976574:A:G	chr3:177976574:A:G	A	G	A	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr3	178146903	178146904	chr3:178146904:A:G	rs1844388	A	G	G	Hoxd9.mouse_homeodomain_1	5	1	+	7.654940340027237	1.2807506217806814	CCCGTAAAA
chr3	178311251	178311252	chr3:178311252:G:A	rs6772500	G	A	G	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr3	178635187	178635188	chr3:178635188:T:A	rs114777043	T	A	T	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr3	178992796	178992797	chr3:178992797:G:T	rs6787571	G	T	G	Hoxd9.mouse_homeodomain_1	0	1	+	8.678783717710262	7.094471634580788	GCCATAAAA
chr3	179289156	179289157	chr3:179289157:C:G	rs7611212	C	G	.	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr3	179324549	179324550	chr3:179324550:A:G	rs71631209	A	G	A	Hoxd9.mouse_homeodomain_1	8	1	+	8.027213970992095	6.560886862506841	CACATAAAA
chr3	179614005	179614006	chr3:179614006:A:G	rs183664286	A	G	A	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr3	179745912	179745913	chr3:179745913:G:A	rs7641593	G	A	A	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr3	182094869	182094870	chr3:182094870:T:C	rs7616655	T	C	T	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr3	182358858	182358859	chr3:182358859:A:G	rs16833062	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.027213970992095	6.693135371129603	CACATAAAA
chr3	182508768	182508769	chr3:182508769:A:G	rs73189972	A	G	A	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr3	182583684	182583685	chr3:182583685:A:G	rs9822514	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	7.889898683853121	6.555820083990628	ACCATAAAA
chr3	182637981	182637982	chr3:182637982:C:T	rs7355912	C	T	T	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr3	182785269	182785270	chr3:182785270:T:C	rs7639575	T	C	T	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr3	182921332	182921333	chr3:182921333:A:G	rs9587	A	G	A	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr3	183114748	183114749	chr3:183114749:G:C	rs2134429	G	C	C	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr3	183301318	183301319	chr3:183301319:C:T	rs73066046	C	T	C	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr3	183302034	183302035	chr3:183302035:T:C	rs73066047	T	C	C	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr3	183302052	183302053	chr3:183302053:A:G	rs73066048	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.287463081002919	6.953384481140425	CCAATAAAA
chr3	183328642	183328643	chr3:183328643:A:G	rs58187004	A	G	A	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr3	183636695	183636696	chr3:183636696:G:T	chr3:183636696:G:T	G	T	G	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr3	183661476	183661477	chr3:183661477:G:C	rs9290768	G	C	g	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr3	183784770	183784771	chr3:183784771:T:C	rs263016	T	C	T	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr3	183815587	183815588	chr3:183815588:C:T	rs2582093	C	T	C	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr3	183829176	183829177	chr3:183829177:C:T	rs263003	C	T	T	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr3	183842503	183842504	chr3:183842504:A:T	rs7652031	A	T	A	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr3	183880209	183880210	chr3:183880210:A:C	rs9290776	A	C	A	Hoxd9.mouse_homeodomain_1	2	1	+	7.9772278588234515	8.678783717710262	GCAATAAAA
chr3	184022336	184022337	chr3:184022337:A:T	rs145691609	A	T	a	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr3	184097131	184097132	chr3:184097132:T:G	rs9836515	T	G	T	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr3	184100183	184100184	chr3:184100184:A:G	rs34611203	A	G	A	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr3	184335691	184335692	chr3:184335692:T:G	chr3:184335692:T:G	T	G	T	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr3	184416164	184416165	chr3:184416165:C:T	rs941838290	C	T	C	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr3	184526280	184526281	chr3:184526281:A:T	rs75381498	A	T	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.099252595576761	6.095771458768116	GCCATTAAA
chr3	184680847	184680848	chr3:184680848:G:A	rs114650081	G	A	G	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr3	184709075	184709076	chr3:184709076:C:T	rs11712584	C	T	C	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr3	184768052	184768053	chr3:184768053:A:G	rs73049683	A	G	A	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr3	185094627	185094628	chr3:185094628:C:T	rs13321350	C	T	G	Hoxd9.mouse_homeodomain_1	3	1	-	7.34470511784777	8.678783717710262	GCCGTAAAA
chr3	185585096	185585097	chr3:185585097:G:A	rs10937226	G	A	G	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr3	185779504	185779505	chr3:185779505:C:T	rs11706322	C	T	C	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr3	185779518	185779519	chr3:185779519:C:A	rs114352678	C	A	C	Hoxd9.mouse_homeodomain_1	0	1	+	8.98901893988973	7.889898683853121	CCCATAAAA
chr3	185779846	185779847	chr3:185779847:A:C	rs4376068	A	C	C	Hoxd9.mouse_homeodomain_1	8	1	+	8.099252595576761	6.566684970234361	GCCATTAAA
chr3	185866748	185866749	chr3:185866749:G:A	rs7649137	G	A	G	Hoxd9.mouse_homeodomain_1	6	1	-	7.241935125048919	6.099603169859144	CCCATACAA
chr3	186107524	186107525	chr3:186107525:T:C	rs1516727	T	C	T	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr3	186174876	186174877	chr3:186174877:G:C	rs13098259	G	C	G	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr3	186259520	186259521	chr3:186259521:C:T	rs2268835	C	T	T	Hoxd9.mouse_homeodomain_1	8	1	+	7.1462160923678635	5.746270592944195	GCCATAAAC
chr3	186293628	186293629	chr3:186293629:T:G	rs13096429	T	G	T	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr3	186293649	186293650	chr3:186293650:G:A	rs544898660	G	A	G	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr3	186369379	186369380	chr3:186369380:G:T	rs7628096	G	T	T	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr3	186505434	186505435	chr3:186505435:T:C	rs3941831	T	C	C	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr3	186815677	186815678	chr3:186815678:A:G	rs541791176	A	G	A	Hoxd9.mouse_homeodomain_1	7	1	+	7.9772278588234515	1.2734019122317202	GCAATAAAA
chr3	186917938	186917939	chr3:186917939:A:G	rs148579933	A	G	A	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr3	186966504	186966505	chr3:186966505:C:G	rs3864107	C	G	C	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr3	186980087	186980088	chr3:186980088:G:T	rs78949521	G	T	g	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr3	186991484	186991485	chr3:186991485:G:T	rs4012250	G	T	T	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr3	187629964	187629965	chr3:187629965:C:T	rs148558798	C	T	C	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr3	187694516	187694517	chr3:187694517:A:T	rs6781541	A	T	T	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr3	187694519	187694520	chr3:187694520:G:A	rs6805968	G	A	G	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr3	187745897	187745898	chr3:187745898:T:G	rs1523469	T	G	T	Hoxd9.mouse_homeodomain_1	4	1	+	7.45645131454733	0.614632867216724	CCCATAAAC
chr3	187913989	187913990	chr3:187913990:G:A	rs56034878	G	A	A	Hoxd9.mouse_homeodomain_1	2	1	-	7.716978748812629	1.2295382911889927	GACATAAAA
chr3	187969239	187969240	chr3:187969240:T:A	rs73887308	T	A	t	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr3	187969240	187969241	chr3:187969241:T:A	rs2647121	T	A	A	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr3	187987344	187987345	chr3:187987345:A:C	rs76332743	A	C	A	Hoxd9.mouse_homeodomain_1	6	1	+	7.45645131454733	5.709367499706518	CCCATAAAC
chr3	188124932	188124933	chr3:188124933:T:C	rs9852144	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.212456609225008	5.878378009362515	GCCATAAAG
chr3	188183773	188183774	chr3:188183774:A:G	rs9863914	A	G	G	Hoxd9.mouse_homeodomain_1	4	1	-	8.678783717710262	6.023737072847684	GCCATAAAA
chr3	188415547	188415548	chr3:188415548:C:T	rs60946162	C	T	C	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr3	188490674	188490675	chr3:188490675:C:T	rs34768213	C	T	C	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr3	188607935	188607936	chr3:188607936:T:G	rs9856723	T	G	T	Hoxd9.mouse_homeodomain_1	5	1	-	8.027213970992095	6.1299064184321015	CACATAAAA
chr3	188641647	188641648	chr3:188641648:A:C	rs10937361	A	C	C	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr3	188819792	188819793	chr3:188819793:T:G	rs77794556	T	G	T	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr3	188854467	188854468	chr3:188854468:G:A	rs73199036	G	A	G	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr3	188888950	188888951	chr3:188888951:G:A	rs1949148	G	A	G	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr3	188948253	188948254	chr3:188948254:G:T	rs894785713	G	T	G	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr3	188962869	188962870	chr3:188962870:A:T	rs16863810	A	T	A	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr3	189190592	189190593	chr3:189190593:A:G	rs4687029	A	G	A	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr3	189508291	189508292	chr3:189508292:G:A	rs16864458	G	A	A	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr3	189531417	189531418	chr3:189531418:C:T	rs1019606	C	T	T	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr3	189657491	189657492	chr3:189657492:T:C	rs372278405	T	C	T	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr3	189766718	189766719	chr3:189766719:T:C	rs11708278	T	C	T	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr3	190038566	190038567	chr3:190038567:T:C	rs1620731	T	C	C	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr3	190040308	190040309	chr3:190040309:T:C	rs2594173	T	C	T	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr3	190122561	190122562	chr3:190122562:G:C	rs973234	G	C	G	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr3	190131591	190131592	chr3:190131592:T:C	rs838267	T	C	T	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr3	190228290	190228291	chr3:190228291:T:C	rs17426472	T	C	T	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr3	190258580	190258581	chr3:190258581:A:C	rs28524169	A	C	C	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr3	190319181	190319182	chr3:190319182:C:T	rs41472149	C	T	C	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr3	190326717	190326718	chr3:190326718:T:C	rs3954259	T	C	T	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr3	190374106	190374107	chr3:190374107:T:C	rs10460899	T	C	T	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr3	190376746	190376747	chr3:190376747:A:T	rs10937431	A	T	A	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr3	190594314	190594315	chr3:190594315:G:A	rs61341630	G	A	G	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr3	190962972	190962973	chr3:190962973:C:T	rs73195764	C	T	c	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr3	191051119	191051120	chr3:191051120:T:C	rs7638212	T	C	C	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr3	191085264	191085265	chr3:191085265:G:A	rs185639314	G	A	G	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr3	191240022	191240023	chr3:191240023:A:G	rs73199665	A	G	A	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr3	191317999	191318000	chr3:191318000:A:T	rs12485795	A	T	A	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr3	191328940	191328941	chr3:191328941:T:C	rs112724649	T	C	C	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr3	191328955	191328956	chr3:191328956:C:T	rs62617841	C	T	C	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr3	191330732	191330733	chr3:191330733:C:A	rs980320	C	A	C	Hoxd9.mouse_homeodomain_1	0	1	-	7.9772278588234515	6.392915775693977	GCAATAAAA
chr3	191350498	191350499	chr3:191350499:T:G	rs293798	T	G	G	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr3	191372171	191372172	chr3:191372172:G:A	rs73185228	G	A	G	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr3	191462670	191462671	chr3:191462671:G:A	rs186067	G	A	G	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr3	191863767	191863768	chr3:191863768:G:A	rs80172427	G	A	g	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr3	191863782	191863783	chr3:191863783:G:T	rs73064829	G	T	G	Hoxd9.mouse_homeodomain_1	0	1	+	7.212456609225008	5.628144526095533	GCCATAAAG
chr3	192039008	192039009	chr3:192039009:C:T	rs566843657	C	T	C	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr3	192789520	192789521	chr3:192789521:T:C	rs6784081	T	C	C	Hoxd9.mouse_homeodomain_1	8	1	-	7.716978748812629	6.250651640327374	GACATAAAA
chr3	192804674	192804675	chr3:192804675:A:G	rs12634154	A	G	G	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr3	192805184	192805185	chr3:192805185:T:G	rs7646191	T	G	G	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr3	192869660	192869661	chr3:192869661:C:G	rs6803473	C	G	C	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr3	192869673	192869674	chr3:192869674:A:G	rs6779110	A	G	G	Hoxd9.mouse_homeodomain_1	3	1	+	8.98901893988973	7.654940340027237	CCCATAAAA
chr3	192930344	192930345	chr3:192930345:C:T	chr3:192930345:C:T	C	T	C	Hoxd9.mouse_homeodomain_1	2	1	+	7.522691831404475	1.0352513737808375	CCCATAAAG
chr3	193030134	193030135	chr3:193030135:G:A	rs11924442	G	A	A	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr3	193242152	193242153	chr3:193242153:G:C	rs117220160	G	C	G	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr3	193766626	193766627	chr3:193766627:T:C	rs904878	T	C	C	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr3	193854144	193854145	chr3:193854145:C:T	rs12496544	C	T	C	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr3	193914824	193914825	chr3:193914825:A:G	rs188438022	A	G	A	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr3	194063053	194063054	chr3:194063054:C:T	rs6792691	C	T	C	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr3	194090338	194090339	chr3:194090339:G:A	rs2368044	G	A	A	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr3	194122437	194122438	chr3:194122438:A:G	rs7618027	A	G	A	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr3	194204585	194204586	chr3:194204586:C:G	rs10048996	C	G	C	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr3	194263636	194263637	chr3:194263637:A:G	rs7430914	A	G	A	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr3	194273187	194273188	chr3:194273188:G:T	rs77971728	G	T	G	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr3	194561961	194561962	chr3:194561962:A:T	rs953855464	A	T	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.027213970992095	6.023732834183452	CACATAAAA
chr3	194565755	194565756	chr3:194565756:A:G	rs11927797	A	G	A	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr3	194598799	194598800	chr3:194598800:G:C	rs9843931	G	C	G	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr3	194639931	194639932	chr3:194639932:A:G	rs79042079	A	G	G	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr3	194757821	194757822	chr3:194757822:T:C	rs73079320	T	C	T	Hoxd9.mouse_homeodomain_1	6	1	-	7.889898683853121	1.18607273726139	ACCATAAAA
chr3	194950517	194950518	chr3:194950518:G:A	rs11718158	G	A	G	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr3	194963571	194963572	chr3:194963572:A:C	rs823008	A	C	C	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr3	194977290	194977291	chr3:194977291:A:G	rs861092	A	G	G	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr3	194984045	194984046	chr3:194984046:T:G	rs10933689	T	G	T	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr3	194984057	194984058	chr3:194984058:C:T	rs1996383	C	T	T	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr3	195002314	195002315	chr3:195002315:T:C	rs193123254	T	C	T	Hoxd9.mouse_homeodomain_1	4	1	+	8.409487817756228	5.7544411728936495	CCCATTAAA
chr3	195068433	195068434	chr3:195068434:T:C	rs6794037	T	C	C	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr3	195148612	195148613	chr3:195148613:C:T	rs2279630	C	T	T	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr3	195149775	195149776	chr3:195149776:A:T	rs60023213	A	T	T	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr3	195252886	195252887	chr3:195252887:G:A	rs112850291	G	A	G	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr3	195252893	195252894	chr3:195252894:C:T	rs118043756	C	T	C	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr3	195252913	195252914	chr3:195252914:G:A	rs1021852544	G	A	G	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr3	195319420	195319421	chr3:195319421:G:A	rs79829900	G	A	G	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr3	195464625	195464626	chr3:195464626:C:T	rs35419807	C	T	T	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr3	195729191	195729192	chr3:195729192:C:T	rs77023253	C	T	c	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr3	195808904	195808905	chr3:195808905:G:C	rs139118489	G	C	g	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr3	195911503	195911504	chr3:195911504:G:T	chr3:195911504:G:T	G	T	G	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr3	195976064	195976065	chr3:195976065:G:C	rs58647363	G	C	-	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr3	196070036	196070037	chr3:196070037:C:T	rs3804141	C	T	C	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr3	196150731	196150732	chr3:196150732:T:C	rs4927879	T	C	C	Hoxd9.mouse_homeodomain_1	3	1	-	8.027213970992095	6.693135371129603	CACATAAAA
chr3	196164043	196164044	chr3:196164044:G:A	rs144402578	G	A	G	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr3	196169100	196169101	chr3:196169101:T:C	rs78180666	T	C	T	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr3	196179927	196179928	chr3:196179928:A:G	rs28433538	A	G	A	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr3	196292499	196292500	chr3:196292500:A:G	rs55878253	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	7.9772278588234515	6.643149258960959	GCAATAAAA
chr3	196661227	196661228	chr3:196661228:G:C	rs62623661	G	C	G	Hoxd9.mouse_homeodomain_1	1	1	-	7.212456609225008	0.8029233804426421	GCCATAAAG
chr3	196713114	196713115	chr3:196713115:A:G	rs78016255	A	G	A	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr3	196963129	196963130	chr3:196963130:C:G	rs335822	C	G	G	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr3	197111614	197111615	chr3:197111615:A:G	rs1356612	A	G	G	Hoxd9.mouse_homeodomain_1	3	1	+	7.889898683853121	6.555820083990628	ACCATAAAA
chr3	197222692	197222693	chr3:197222693:C:T	rs2044861	C	T	C	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr3	197371817	197371818	chr3:197371818:C:A	rs116031227	C	A	C	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr3	197425929	197425930	chr3:197425930:T:C	rs9874443	T	C	C	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr3	197425939	197425940	chr3:197425940:A:G	rs9870382	A	G	G	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr3	197453829	197453830	chr3:197453830:T:C	rs35330821	T	C	T	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr3	197548243	197548244	chr3:197548244:C:T	rs13088613	C	T	C	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr3	197848329	197848330	chr3:197848330:G:A	rs75560070	G	A	G	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr4	241622	241623	chr4:241623:G:T	rs187897497	G	T	.	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr4	241640	241641	chr4:241641:T:C	rs6832109	T	C	.	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr4	473628	473629	chr4:473629:C:G	chr4:473629:C:G	C	G	C	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr4	473644	473645	chr4:473645:A:C	rs187811907	A	C	A	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr4	638288	638289	chr4:638289:G:A	rs35564967	G	A	G	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr4	868367	868368	chr4:868368:T:C	rs2306245	T	C	T	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr4	923909	923910	chr4:923910:C:T	rs6847650	C	T	C	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr4	931080	931081	chr4:931081:T:C	rs780372396	T	C	T	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr4	1050526	1050527	chr4:1050527:G:T	rs73070465	G	T	G	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr4	1089323	1089324	chr4:1089324:C:T	rs676561	C	T	T	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr4	1130603	1130604	chr4:1130604:C:A	rs73792282	C	A	C	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr4	1130632	1130633	chr4:1130633:C:T	rs576285211	C	T	C	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr4	1130634	1130635	chr4:1130635:G:T	rs144217149	G	T	G	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr4	1165891	1165892	chr4:1165892:A:G	rs7669287	A	G	G	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr4	1242773	1242774	chr4:1242774:C:G	rs1564509	C	G	C	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr4	1290461	1290462	chr4:1290462:A:C	rs568089305	A	C	A	Hoxd9.mouse_homeodomain_1	4	1	-	7.091711387329735	0.2498929399991291	CCCATCAAA
chr4	1290473	1290474	chr4:1290474:A:G	rs536042876	A	G	A	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr4	1306197	1306198	chr4:1306198:C:T	rs13124383	C	T	C	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr4	1449452	1449453	chr4:1449453:T:G	rs891852567	T	G	T	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr4	1468790	1468791	chr4:1468791:C:G	rs1050707120	C	G	G	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr4	1550542	1550543	chr4:1550543:C:T	rs1031250745	C	T	C	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr4	1550557	1550558	chr4:1550558:G:A	rs60284047	G	A	G	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr4	1709306	1709307	chr4:1709307:G:A	rs182093232	G	A	G	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr4	2092300	2092301	chr4:2092301:G:A	rs3117816	G	A	G	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr4	2163213	2163214	chr4:2163214:C:A	rs618262	C	A	A	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr4	2369381	2369382	chr4:2369382:G:T	rs3128813	G	T	G	Hoxd9.mouse_homeodomain_1	0	1	+	7.212456609225008	5.628144526095533	GCCATAAAG
chr4	2541822	2541823	chr4:2541823:C:T	rs73207317	C	T	-	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr4	2561079	2561080	chr4:2561080:G:A	rs17164050	G	A	G	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr4	2597831	2597832	chr4:2597832:T:C	rs71608210	T	C	T	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr4	2597832	2597833	chr4:2597833:C:T	rs111398194	C	T	C	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr4	3057602	3057603	chr4:3057603:G:A	rs2960299	G	A	G	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr4	3071435	3071436	chr4:3071436:A:G	rs61090955	A	G	A	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr4	3073521	3073522	chr4:3073522:C:G	rs192838728	C	G	C	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr4	3637707	3637708	chr4:3637708:G:A	rs60148846	G	A	G	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr4	3645545	3645546	chr4:3645546:C:T	rs79056807	C	T	C	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr4	3675818	3675819	chr4:3675819:C:T	rs76304067	C	T	C	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr4	3675855	3675856	chr4:3675856:G:A	rs10019539	G	A	A	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr4	3720831	3720832	chr4:3720832:G:A	rs2748762	G	A	G	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr4	3908434	3908435	chr4:3908435:T:A	rs28420432	T	A	-	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr4	3921634	3921635	chr4:3921635:G:T	rs9990737	G	T	-	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr4	3924654	3924655	chr4:3924655:C:A	rs78290329	C	A	-	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr4	3954618	3954619	chr4:3954619:C:T	rs2004241	C	T	-	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr4	3954650	3954651	chr4:3954651:C:G	rs953445728	C	G	-	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr4	4036959	4036960	chr4:4036960:T:G	rs13112934	T	G	-	Hoxd9.mouse_homeodomain_1	0	1	-	7.889898683853121	8.98901893988973	ACCATAAAA
chr4	4036975	4036976	chr4:4036976:C:T	rs28495217	C	T	-	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr4	4365271	4365272	chr4:4365272:T:G	rs7690552	T	G	G	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr4	4473665	4473666	chr4:4473666:A:C	rs6446649	A	C	C	Hoxd9.mouse_homeodomain_1	6	1	+	8.027213970992095	6.2801301561512854	CACATAAAA
chr4	4540618	4540619	chr4:4540619:C:T	rs4689881	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	-	7.212456609225008	6.423571575367866	GCCATAAAG
chr4	4760134	4760135	chr4:4760135:A:G	rs1318947	A	G	A	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr4	4763614	4763615	chr4:4763615:G:A	rs547960178	G	A	G	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr4	4840257	4840258	chr4:4840258:T:G	rs34863439	T	G	G	Hoxd9.mouse_homeodomain_1	7	1	-	8.409487817756228	5.520072047725641	CCCATTAAA
chr4	4858409	4858410	chr4:4858410:C:A	rs180826715	C	A	C	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr4	4858410	4858411	chr4:4858411:A:G	rs3821947	A	G	G	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr4	4858412	4858413	chr4:4858413:G:A	rs372717029	G	A	G	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr4	4898130	4898131	chr4:4898131:C:G	rs4449369	C	G	C	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr4	4931499	4931500	chr4:4931500:C:T	rs4303923	C	T	T	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr4	4931524	4931525	chr4:4931525:A:G	rs4404491	A	G	A	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr4	4931531	4931532	chr4:4931532:C:G	rs4473604	C	G	C	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr4	5077061	5077062	chr4:5077062:C:T	rs10937620	C	T	T	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr4	5086767	5086768	chr4:5086768:G:A	rs6853545	G	A	G	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr4	5098108	5098109	chr4:5098109:G:A	rs28417323	G	A	G	Hoxd9.mouse_homeodomain_1	0	1	-	8.287463081002919	6.392915775693977	CCAATAAAA
chr4	5119099	5119100	chr4:5119100:T:C	rs74325872	T	C	T	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr4	5142685	5142686	chr4:5142686:T:C	rs76819705	T	C	T	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr4	5188250	5188251	chr4:5188251:C:A	rs12499824	C	A	C	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr4	5215157	5215158	chr4:5215158:A:G	rs11734549	A	G	G	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr4	5292104	5292105	chr4:5292105:C:T	rs78584414	C	T	C	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr4	5438080	5438081	chr4:5438081:T:A	rs1004374	T	A	A	Hoxd9.mouse_homeodomain_1	8	1	-	7.091711387329735	4.159198262563667	CCCATCAAA
chr4	5749293	5749294	chr4:5749294:T:C	rs34541164	T	C	T	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr4	5883893	5883894	chr4:5883894:C:T	rs4315727	C	T	T	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr4	6061321	6061322	chr4:6061322:C:A	rs6446450	C	A	A	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr4	6066539	6066540	chr4:6066540:C:T	rs17766335	C	T	T	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr4	6111484	6111485	chr4:6111485:A:C	rs140856634	A	C	A	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr4	6175328	6175329	chr4:6175329:T:C	rs17773514	T	C	T	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr4	6288309	6288310	chr4:6288310:G:C	rs4342257	G	C	C	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr4	6327515	6327516	chr4:6327516:G:A	rs370542220	G	A	G	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr4	6389945	6389946	chr4:6389946:T:C	rs4391116	T	C	T	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr4	6389947	6389948	chr4:6389948:G:A	rs4997044	G	A	G	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr4	6533585	6533586	chr4:6533586:C:T	rs28548874	C	T	C	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr4	6709102	6709103	chr4:6709103:T:A	rs1396634582	T	A	T	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr4	6983526	6983527	chr4:6983527:G:A	rs75842040	G	A	G	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr4	6986909	6986910	chr4:6986910:A:G	rs35809432	A	G	A	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr4	7019488	7019489	chr4:7019489:T:C	rs6811496	T	C	C	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr4	7070271	7070272	chr4:7070272:C:T	rs66925245	C	T	C	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr4	7164650	7164651	chr4:7164651:A:G	rs767477840	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	7.241935125048919	5.907856525186427	CCCATACAA
chr4	7201510	7201511	chr4:7201511:T:G	rs115047454	T	G	T	Hoxd9.mouse_homeodomain_1	8	1	-	7.889898683853121	6.357331058510722	ACCATAAAA
chr4	7250401	7250402	chr4:7250402:C:T	rs1048734890	C	T	C	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr4	7348851	7348852	chr4:7348852:C:G	rs116486576	C	G	C	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr4	7383627	7383628	chr4:7383628:C:G	rs3864222	C	G	G	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr4	7417180	7417181	chr4:7417181:A:G	rs146039625	A	G	A	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr4	7592174	7592175	chr4:7592175:T:C	rs7673460	T	C	C	Hoxd9.mouse_homeodomain_1	3	1	-	7.1462160923678635	5.81213749250537	GCCATAAAC
chr4	7662020	7662021	chr4:7662021:G:A	rs180887894	G	A	G	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr4	7682285	7682286	chr4:7682286:G:A	rs28420857	G	A	G	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr4	7771131	7771132	chr4:7771132:C:G	rs76013223	C	G	C	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr4	7779832	7779833	chr4:7779833:G:A	rs10025154	G	A	G	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr4	7861693	7861694	chr4:7861694:T:C	rs574942356	T	C	T	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr4	7861703	7861704	chr4:7861704:T:C	chr4:7861704:T:C	T	C	T	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr4	7890697	7890698	chr4:7890698:T:C	rs56411722	T	C	T	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr4	7905599	7905600	chr4:7905600:C:T	rs10213406	C	T	C	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr4	7905625	7905626	chr4:7905626:G:A	rs114205902	G	A	G	Hoxd9.mouse_homeodomain_1	2	1	-	8.099252595576761	1.6118121379531245	GCCATTAAA
chr4	8045137	8045138	chr4:8045138:G:A	rs59097324	G	A	g	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr4	8083446	8083447	chr4:8083447:G:A	rs11724908	G	A	G	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr4	8278797	8278798	chr4:8278798:A:G	rs28666773	A	G	G	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr4	8298309	8298310	chr4:8298310:T:C	rs115628282	T	C	T	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr4	8362633	8362634	chr4:8362634:C:T	rs62285994	C	T	c	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr4	8392179	8392180	chr4:8392180:G:A	rs9992927	G	A	G	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr4	8480588	8480589	chr4:8480589:T:C	rs56786736	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.287463081002919	6.953384481140425	CCAATAAAA
chr4	8640626	8640627	chr4:8640627:G:A	rs76222300	G	A	G	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr4	8663585	8663586	chr4:8663586:A:C	rs757048480	A	C	A	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr4	8674261	8674262	chr4:8674262:C:G	rs9637585	C	G	C	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr4	8757702	8757703	chr4:8757703:C:T	rs373138249	C	T	C	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr4	8913899	8913900	chr4:8913900:T:C	rs1034396	T	C	c	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr4	8956401	8956402	chr4:8956402:A:G	rs536364816	A	G	N	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr4	9025937	9025938	chr4:9025938:G:A	rs2037761	G	A	g	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr4	9073581	9073582	chr4:9073582:C:G	rs150009022	C	G	N	Hoxd9.mouse_homeodomain_1	8	1	+	7.1462160923678635	7.212456609225008	GCCATAAAC
chr4	9079215	9079216	chr4:9079216:G:C	rs35927490	G	C	N	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr4	9123911	9123912	chr4:9123912:A:T	rs150117879	A	T	N	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr4	9154130	9154131	chr4:9154131:C:A	rs147326945	C	A	N	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr4	9434726	9434727	chr4:9434727:T:C	rs75621366	T	C	t	Hoxd9.mouse_homeodomain_1	6	1	-	7.522691831404475	0.8188658848127437	CCCATAAAG
chr4	9494037	9494038	chr4:9494038:T:C	rs2049545	T	C	N	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr4	9603828	9603829	chr4:9603829:G:A	rs61216331	G	A	g	Hoxd9.mouse_homeodomain_1	0	1	+	7.212456609225008	6.423571575367866	GCCATAAAG
chr4	9692278	9692279	chr4:9692279:G:A	rs58688978	G	A	g	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr4	9692610	9692611	chr4:9692611:G:T	rs73802957	G	T	g	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr4	9692611	9692612	chr4:9692612:C:T	rs73802958	C	T	c	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr4	9692776	9692777	chr4:9692777:G:A	rs13150941	G	A	g	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr4	9732319	9732320	chr4:9732320:C:A	rs187539290	C	A	c	Hoxd9.mouse_homeodomain_1	8	1	-	7.522691831404475	6.056505815123662	CCCATAAAG
chr4	9762939	9762940	chr4:9762940:T:C	rs11734974	T	C	c	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr4	9868345	9868346	chr4:9868346:A:G	rs55858763	A	G	-	Hoxd9.mouse_homeodomain_1	3	1	+	7.45645131454733	6.122372714684838	CCCATAAAC
chr4	10008165	10008166	chr4:10008166:C:T	rs6856989	C	T	C	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr4	10102478	10102479	chr4:10102479:C:G	rs34893238	C	G	C	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr4	10168480	10168481	chr4:10168481:T:G	rs7679297	T	G	t	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr4	10168493	10168494	chr4:10168494:C:T	rs113922469	C	T	c	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr4	10168725	10168726	chr4:10168726:G:T	rs187936693	G	T	g	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr4	10179749	10179750	chr4:10179750:A:G	rs723663	A	G	a	Hoxd9.mouse_homeodomain_1	7	1	+	7.212456609225008	0.5086306626332764	GCCATAAAG
chr4	10179762	10179763	chr4:10179763:T:A	rs12500891	T	A	t	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr4	10573589	10573590	chr4:10573590:A:G	rs6448095	A	G	A	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr4	10783363	10783364	chr4:10783364:T:C	rs80143327	T	C	C	Hoxd9.mouse_homeodomain_1	5	1	-	8.027213970992095	1.6530242527455408	CACATAAAA
chr4	10783381	10783382	chr4:10783382:T:C	rs7676744	T	C	T	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr4	11155120	11155121	chr4:11155121:C:G	rs2870403	C	G	G	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr4	11183054	11183055	chr4:11183055:G:A	rs60277933	G	A	A	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr4	11198255	11198256	chr4:11198256:C:A	rs7656481	C	A	C	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr4	11293983	11293984	chr4:11293984:A:T	rs148740163	A	T	A	Hoxd9.mouse_homeodomain_1	5	1	+	7.212456609225008	6.632925487091506	GCCATAAAG
chr4	11293991	11293992	chr4:11293992:G:A	rs77547034	G	A	G	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr4	11430957	11430958	chr4:11430958:A:G	rs224488	A	G	G	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr4	11505829	11505830	chr4:11505830:C:A	rs4916640	C	A	C	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr4	11505862	11505863	chr4:11505863:G:A	rs77147363	G	A	G	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr4	11534706	11534707	chr4:11534707:A:G	rs7691810	A	G	G	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr4	11534734	11534735	chr4:11534735:G:A	rs7666714	G	A	A	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr4	11537818	11537819	chr4:11537819:C:T	rs1565929	C	T	T	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr4	11720367	11720368	chr4:11720368:T:C	rs11729868	T	C	T	Hoxd9.mouse_homeodomain_1	8	1	-	7.9772278588234515	6.510900750338196	GCAATAAAA
chr4	11748387	11748388	chr4:11748388:C:G	rs57789392	C	G	C	Hoxd9.mouse_homeodomain_1	0	1	-	7.716978748812629	8.027213970992095	GACATAAAA
chr4	12516431	12516432	chr4:12516432:A:G	rs6448911	A	G	a	Hoxd9.mouse_homeodomain_1	3	1	+	7.241935125048919	5.907856525186427	CCCATACAA
chr4	12583336	12583337	chr4:12583337:A:T	rs7677246	A	T	T	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr4	12583337	12583338	chr4:12583338:A:G	rs73818945	A	G	G	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr4	12702480	12702481	chr4:12702481:A:T	rs7672510	A	T	A	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr4	12702484	12702485	chr4:12702485:G:A	rs7693586	G	A	G	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr4	12849700	12849701	chr4:12849701:T:G	rs76998081	T	G	T	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr4	12950334	12950335	chr4:12950335:G:A	rs58403633	G	A	g	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr4	13261471	13261472	chr4:13261472:T:C	rs16888424	T	C	C	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr4	13545670	13545671	chr4:13545671:G:C	rs115947622	G	C	G	Hoxd9.mouse_homeodomain_1	2	1	-	7.889898683853121	4.421907026400791	ACCATAAAA
chr4	13640328	13640329	chr4:13640329:G:A	rs191872062	G	A	G	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr4	13858952	13858953	chr4:13858953:C:G	rs17755204	C	G	C	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr4	13989405	13989406	chr4:13989406:C:G	rs73798553	C	G	C	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr4	14180517	14180518	chr4:14180518:G:C	rs16889780	G	C	G	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr4	14183559	14183560	chr4:14183560:A:G	rs6846915	A	G	A	Hoxd9.mouse_homeodomain_1	6	1	+	8.099252595576761	1.3954266489850298	GCCATTAAA
chr4	14452619	14452620	chr4:14452620:T:C	rs13117296	T	C	T	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr4	15117354	15117355	chr4:15117355:C:T	rs1378341	C	T	C	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr4	15316197	15316198	chr4:15316198:G:A	rs59217347	G	A	A	Hoxd9.mouse_homeodomain_1	0	1	+	7.716978748812629	6.928093714955487	GACATAAAA
chr4	15353375	15353376	chr4:15353376:A:G	rs79148290	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.98901893988973	7.654940340027237	CCCATAAAA
chr4	15353391	15353392	chr4:15353392:G:A	rs75479388	G	A	G	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr4	15419208	15419209	chr4:15419209:C:G	rs1990524	C	G	C	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr4	15639394	15639395	chr4:15639395:G:C	rs12651550	G	C	C	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr4	15811043	15811044	chr4:15811044:G:A	rs6449193	G	A	A	Hoxd9.mouse_homeodomain_1	2	1	-	8.027213970992095	1.5397735133684596	CACATAAAA
chr4	15811773	15811774	chr4:15811774:C:A	rs191043971	C	A	c	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr4	15902348	15902349	chr4:15902349:T:C	rs62290787	T	C	T	Hoxd9.mouse_homeodomain_1	6	1	-	8.678783717710262	1.9749577711185315	GCCATAAAA
chr4	16016518	16016519	chr4:16016519:C:T	rs2531155	C	T	T	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr4	16021524	16021525	chr4:16021525:T:A	rs13106881	T	A	T	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr4	16024213	16024214	chr4:16024214:C:T	rs17478336	C	T	C	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr4	16024229	16024230	chr4:16024230:A:G	rs16892822	A	G	A	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr4	16030188	16030189	chr4:16030189:G:T	rs885289	G	T	G	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr4	16030193	16030194	chr4:16030194:C:T	rs146524567	C	T	C	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr4	16217417	16217418	chr4:16217418:T:C	rs57110573	T	C	T	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr4	16256426	16256427	chr4:16256427:C:A	rs203448	C	A	C	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr4	16442354	16442355	chr4:16442355:C:T	rs75404600	C	T	T	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr4	16597610	16597611	chr4:16597611:C:T	rs1496747	C	T	C	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr4	16617088	16617089	chr4:16617089:G:A	rs532666476	G	A	G	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr4	16617101	16617102	chr4:16617102:T:A	rs144704507	T	A	T	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr4	16844483	16844484	chr4:16844484:T:C	chr4:16844484:T:C	T	C	T	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr4	16938527	16938528	chr4:16938528:T:C	rs16894200	T	C	T	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr4	16990230	16990231	chr4:16990231:A:G	rs35576152	A	G	A	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr4	17068901	17068902	chr4:17068902:T:A	rs28408225	T	A	A	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr4	17068902	17068903	chr4:17068903:A:G	rs28455966	A	G	G	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr4	17272261	17272262	chr4:17272262:A:G	rs28532849	A	G	A	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr4	17310718	17310719	chr4:17310719:T:C	rs111808517	T	C	T	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr4	17358508	17358509	chr4:17358509:T:G	rs12651615	T	G	T	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr4	17489746	17489747	chr4:17489747:A:G	rs2597771	A	G	G	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr4	17492515	17492516	chr4:17492516:C:A	rs573229631	C	A	T	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr4	17549850	17549851	chr4:17549851:C:G	rs35399457	C	G	G	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr4	17559515	17559516	chr4:17559516:G:A	rs6828925	G	A	G	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr4	17854288	17854289	chr4:17854289:C:T	rs6837666	C	T	T	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr4	18006575	18006576	chr4:18006576:A:C	rs6842114	A	C	C	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr4	18289306	18289307	chr4:18289307:T:G	rs12511224	T	G	T	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr4	18291520	18291521	chr4:18291521:A:G	rs13147572	A	G	A	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr4	18934159	18934160	chr4:18934160:G:T	rs10005486	G	T	g	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr4	19181781	19181782	chr4:19181782:G:A	rs185951716	G	A	G	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr4	19187677	19187678	chr4:19187678:G:C	rs6827247	G	C	G	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr4	19379554	19379555	chr4:19379555:A:G	rs35881948	A	G	A	Hoxd9.mouse_homeodomain_1	7	1	+	8.678783717710262	1.9749577711185315	GCCATAAAA
chr4	19379566	19379567	chr4:19379567:T:G	rs1552659	T	G	G	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr4	19379575	19379576	chr4:19379576:C:T	rs75411478	C	T	C	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr4	19479129	19479130	chr4:19479130:A:G	rs189242694	A	G	A	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr4	19983302	19983303	chr4:19983303:T:C	rs4575988	T	C	T	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr4	20192929	20192930	chr4:20192930:G:A	rs474286	G	A	G	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr4	20337512	20337513	chr4:20337513:T:G	rs10006112	T	G	T	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr4	20480837	20480838	chr4:20480838:C:G	rs16869654	C	G	C	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr4	20724452	20724453	chr4:20724453:T:C	rs7673805	T	C	c	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr4	20840554	20840555	chr4:20840555:C:T	rs6447990	C	T	T	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr4	20840941	20840942	chr4:20840942:G:A	rs7672234	G	A	G	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr4	21117712	21117713	chr4:21117713:C:T	rs149352792	C	T	C	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr4	21465248	21465249	chr4:21465249:T:C	rs7694276	T	C	T	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr4	21554373	21554374	chr4:21554374:G:C	rs35181620	G	C	G	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr4	21738687	21738688	chr4:21738688:C:T	rs7684151	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	-	7.212456609225008	6.423571575367866	GCCATAAAG
chr4	21845298	21845299	chr4:21845299:A:G	rs11736403	A	G	A	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr4	21889034	21889035	chr4:21889035:A:C	rs73258511	A	C	A	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr4	21922835	21922836	chr4:21922836:A:G	rs13127167	A	G	G	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr4	22370067	22370068	chr4:22370068:T:C	rs12108221	T	C	T	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr4	22667184	22667185	chr4:22667185:C:T	rs7655837	C	T	C	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr4	22679913	22679914	chr4:22679914:A:G	rs2629975	A	G	G	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr4	22778511	22778512	chr4:22778512:G:T	rs1601471	G	T	T	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr4	22795006	22795007	chr4:22795007:G:C	rs75420049	G	C	G	Hoxd9.mouse_homeodomain_1	0	1	+	8.099252595576761	8.409487817756228	GCCATTAAA
chr4	23279839	23279840	chr4:23279840:C:T	rs60418868	C	T	C	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr4	23324130	23324131	chr4:23324131:A:G	rs1396667	A	G	G	Hoxd9.mouse_homeodomain_1	1	1	+	7.716978748812629	2.2692504889278973	GACATAAAA
chr4	23373793	23373794	chr4:23373794:A:G	rs115948520	A	G	A	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr4	23385691	23385692	chr4:23385692:C:T	rs215478	C	T	C	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr4	23452246	23452247	chr4:23452247:A:T	rs74286759	A	T	T	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr4	23583785	23583786	chr4:23583786:C:A	rs1012562389	C	A	C	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr4	23734505	23734506	chr4:23734506:G:A	rs16874051	G	A	G	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr4	23818402	23818403	chr4:23818403:T:C	rs61688770	T	C	T	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr4	23878167	23878168	chr4:23878168:C:T	rs6823474	C	T	C	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr4	24260367	24260368	chr4:24260368:T:A	rs17648008	T	A	T	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr4	24266020	24266021	chr4:24266021:A:G	rs16875481	A	G	A	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr4	24304287	24304288	chr4:24304288:G:A	rs1362047637	G	A	G	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr4	24434488	24434489	chr4:24434489:C:T	rs368744768	C	T	C	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr4	24599234	24599235	chr4:24599235:C:T	rs7437610	C	T	C	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr4	24606951	24606952	chr4:24606952:C:T	rs4549364	C	T	T	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr4	24625151	24625152	chr4:24625152:C:T	rs1395223	C	T	T	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr4	24630422	24630423	chr4:24630423:A:G	rs76399176	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.027213970992095	6.693135371129603	CACATAAAA
chr4	24684555	24684556	chr4:24684556:G:A	rs13101306	G	A	A	Hoxd9.mouse_homeodomain_1	2	1	-	7.889898683853121	1.4024582262294842	ACCATAAAA
chr4	24733207	24733208	chr4:24733208:G:A	rs6833151	G	A	G	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr4	24771364	24771365	chr4:24771365:T:A	rs1191836412	T	A	T	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr4	24775917	24775918	chr4:24775918:A:T	rs36075157	A	T	A	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr4	25023701	25023702	chr4:25023702:T:C	rs62409674	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.212456609225008	5.878378009362515	GCCATAAAG
chr4	25059852	25059853	chr4:25059853:G:A	rs10025141	G	A	G	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr4	25346700	25346701	chr4:25346701:A:G	rs167584	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.099252595576761	6.765173995714267	GCCATTAAA
chr4	25530455	25530456	chr4:25530456:C:G	rs9999585	C	G	G	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr4	25569421	25569422	chr4:25569422:G:A	rs16877251	G	A	A	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr4	25723144	25723145	chr4:25723145:C:A	rs186214374	C	A	C	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr4	25825379	25825380	chr4:25825380:C:T	rs540097809	C	T	C	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr4	26048622	26048623	chr4:26048623:G:A	rs75403305	G	A	G	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr4	26199082	26199083	chr4:26199083:A:G	rs10517092	A	G	A	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr4	26226843	26226844	chr4:26226844:C:T	rs78940240	C	T	C	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr4	26231196	26231197	chr4:26231197:G:C	rs73114507	G	C	G	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr4	26400564	26400565	chr4:26400565:A:G	rs11726853	A	G	G	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr4	26576503	26576504	chr4:26576504:T:C	rs79011522	T	C	T	Hoxd9.mouse_homeodomain_1	6	1	-	8.027213970992095	1.3233880244003648	CACATAAAA
chr4	26624337	26624338	chr4:26624338:C:T	rs114396570	C	T	C	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr4	26701751	26701752	chr4:26701752:A:C	rs13136817	A	C	A	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr4	26921545	26921546	chr4:26921546:T:G	rs150654373	T	G	T	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr4	26928094	26928095	chr4:26928095:T:C	rs780078716	T	C	T	Hoxd9.mouse_homeodomain_1	5	1	-	8.98901893988973	2.6148292216431743	CCCATAAAA
chr4	27076242	27076243	chr4:27076243:C:A	rs12696876	C	A	-	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr4	27267446	27267447	chr4:27267447:T:C	rs148538420	T	C	T	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr4	27430900	27430901	chr4:27430901:G:A	rs210777	G	A	a	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr4	27685483	27685484	chr4:27685484:T:A	rs426111	T	A	T	Hoxd9.mouse_homeodomain_1	4	1	+	8.027213970992095	1.1853955236614904	CACATAAAA
chr4	27685774	27685775	chr4:27685775:G:A	rs1449766	G	A	G	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr4	27761944	27761945	chr4:27761945:G:A	rs7677623	G	A	A	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr4	29044059	29044060	chr4:29044060:A:G	rs1402507	A	G	G	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr4	29734424	29734425	chr4:29734425:A:T	rs10013316	A	T	T	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr4	29937281	29937282	chr4:29937282:C:T	rs73211227	C	T	C	Hoxd9.mouse_homeodomain_1	3	1	-	7.654940340027237	8.98901893988973	CCCGTAAAA
chr4	29937282	29937283	chr4:29937283:G:A	rs11932945	G	A	G	Hoxd9.mouse_homeodomain_1	2	1	-	7.654940340027237	1.1674998824035994	CCCGTAAAA
chr4	30642697	30642698	chr4:30642698:G:A	rs77856977	G	A	G	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr4	30866832	30866833	chr4:30866833:C:A	rs10008068	C	A	C	Hoxd9.mouse_homeodomain_1	1	1	+	8.099252595576761	7.137447626679127	GCCATTAAA
chr4	30954726	30954727	chr4:30954727:A:T	rs4499665	A	T	A	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr4	31291358	31291359	chr4:31291359:G:A	rs116537445	G	A	G	Hoxd9.mouse_homeodomain_1	2	1	-	7.091711387329735	0.6042709297060974	CCCATCAAA
chr4	31291369	31291370	chr4:31291370:G:T	rs76479662	G	T	G	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr4	31440736	31440737	chr4:31440737:T:C	rs614705	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.889898683853121	6.555820083990628	ACCATAAAA
chr4	31964938	31964939	chr4:31964939:G:T	rs10026863	G	T	G	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr4	32321751	32321752	chr4:32321752:C:T	rs1377892	C	T	C	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr4	32443349	32443350	chr4:32443350:A:T	rs4588507	A	T	A	Hoxd9.mouse_homeodomain_1	4	1	-	7.9772278588234515	1.1354094114928457	GCAATAAAA
chr4	32473303	32473304	chr4:32473304:T:C	rs10001909	T	C	C	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr4	32572547	32572548	chr4:32572548:G:A	rs74565603	G	A	G	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr4	32768615	32768616	chr4:32768616:T:A	rs4544753	T	A	A	Hoxd9.mouse_homeodomain_1	6	1	-	8.98901893988973	6.099603169859144	CCCATAAAA
chr4	32795946	32795947	chr4:32795947:G:T	rs76122901	G	T	G	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr4	32951539	32951540	chr4:32951540:A:C	rs73212997	A	C	A	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr4	33106134	33106135	chr4:33106135:G:A	rs16988612	G	A	G	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr4	34010972	34010973	chr4:34010973:C:A	rs191867571	C	A	c	Hoxd9.mouse_homeodomain_1	0	1	-	7.9772278588234515	6.392915775693977	GCAATAAAA
chr4	35207249	35207250	chr4:35207250:C:A	rs80028489	C	A	C	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr4	35207250	35207251	chr4:35207251:A:G	rs191233871	A	G	A	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr4	35440033	35440034	chr4:35440034:A:T	rs191973807	A	T	A	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr4	35440037	35440038	chr4:35440038:T:A	rs1866900	T	A	T	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr4	35494557	35494558	chr4:35494558:G:T	rs7692154	G	T	T	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr4	35741505	35741506	chr4:35741506:C:G	rs77692341	C	G	C	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr4	36105174	36105175	chr4:36105175:A:C	rs6531410	A	C	C	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr4	36187924	36187925	chr4:36187925:T:C	rs73127463	T	C	T	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr4	36198313	36198314	chr4:36198314:T:C	rs4428311	T	C	C	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr4	36286052	36286053	chr4:36286053:C:T	rs77881833	C	T	c	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr4	36308510	36308511	chr4:36308511:T:G	rs150903588	T	G	T	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr4	37027288	37027289	chr4:37027289:A:G	rs73807147	A	G	A	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr4	37027293	37027294	chr4:37027294:C:T	rs73807148	C	T	C	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr4	37139332	37139333	chr4:37139333:T:A	rs1951766	T	A	A	Hoxd9.mouse_homeodomain_1	5	1	-	7.889898683853121	7.3103675617196195	ACCATAAAA
chr4	37181251	37181252	chr4:37181252:G:A	rs189559037	G	A	g	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr4	37368381	37368382	chr4:37368382:C:A	rs28523611	C	A	A	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr4	37516940	37516941	chr4:37516941:A:G	rs2928331	A	G	G	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr4	37561817	37561818	chr4:37561818:A:T	rs62298242	A	T	A	Hoxd9.mouse_homeodomain_1	4	1	-	8.027213970992095	1.1853955236614904	CACATAAAA
chr4	38156725	38156726	chr4:38156726:C:T	rs12503618	C	T	T	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr4	38191139	38191140	chr4:38191140:T:G	chr4:38191140:T:G	T	G	T	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr4	38276205	38276206	chr4:38276206:C:T	rs11737715	C	T	C	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr4	38290156	38290157	chr4:38290157:T:C	rs112484267	T	C	T	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr4	38388207	38388208	chr4:38388208:A:G	rs1487617	A	G	A	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr4	38596572	38596573	chr4:38596573:C:T	rs2637691	C	T	T	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr4	38610735	38610736	chr4:38610736:A:C	rs1962053	A	C	A	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr4	38613461	38613462	chr4:38613462:T:C	rs337645	T	C	T	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr4	38675605	38675606	chr4:38675606:A:C	rs34089598	A	C	A	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr4	38872865	38872866	chr4:38872866:T:A	rs7667913	T	A	T	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr4	38873023	38873024	chr4:38873024:C:T	rs7685725	C	T	C	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr4	38925774	38925775	chr4:38925775:T:C	rs10155189	T	C	C	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr4	38947832	38947833	chr4:38947833:A:G	rs186108779	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.98901893988973	7.654940340027237	CCCATAAAA
chr4	38981234	38981235	chr4:38981235:A:T	rs890488558	A	T	A	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr4	39045449	39045450	chr4:39045450:A:G	rs116724947	A	G	A	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr4	39167424	39167425	chr4:39167425:G:A	rs12505690	G	A	G	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr4	39308416	39308417	chr4:39308417:T:G	rs1051286562	T	G	T	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr4	39497844	39497845	chr4:39497845:G:A	rs56090489	G	A	G	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr4	39505836	39505837	chr4:39505837:T:C	rs6832089	T	C	T	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr4	39710575	39710576	chr4:39710576:C:T	rs62310078	C	T	C	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr4	39802556	39802557	chr4:39802557:C:G	rs12511274	C	G	c	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr4	39874118	39874119	chr4:39874119:T:C	rs7698671	T	C	C	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr4	39964785	39964786	chr4:39964786:C:T	rs2664189	C	T	T	Hoxd9.mouse_homeodomain_1	2	1	+	8.027213970992095	1.5397735133684596	CACATAAAA
chr4	40242652	40242653	chr4:40242653:T:A	rs61676147	T	A	T	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr4	40492049	40492050	chr4:40492050:C:G	rs113834136	C	G	C	Hoxd9.mouse_homeodomain_1	1	1	+	7.212456609225008	0.8029233804426421	GCCATAAAG
chr4	40910945	40910946	chr4:40910946:T:C	rs73810676	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.287463081002919	6.953384481140425	CCAATAAAA
chr4	41025195	41025196	chr4:41025196:A:G	rs6821155	A	G	A	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr4	41155900	41155901	chr4:41155901:T:C	rs7669288	T	C	C	Hoxd9.mouse_homeodomain_1	4	1	+	7.889898683853121	5.234852038990543	ACCATAAAA
chr4	41319107	41319108	chr4:41319108:G:A	rs114799895	G	A	G	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr4	41456190	41456191	chr4:41456191:T:C	rs62411119	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.099252595576761	6.765173995714267	GCCATTAAA
chr4	41525030	41525031	chr4:41525031:C:T	rs74896844	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	+	8.027213970992095	6.132666665683155	CACATAAAA
chr4	41525050	41525051	chr4:41525051:C:T	rs78883814	C	T	C	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr4	41750550	41750551	chr4:41750551:C:T	rs113832611	C	T	C	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr4	42371564	42371565	chr4:42371565:A:C	rs2632709	A	C	A	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr4	42622730	42622731	chr4:42622731:T:C	rs11728847	T	C	C	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr4	42678618	42678619	chr4:42678619:G:A	rs2612489	G	A	A	Hoxd9.mouse_homeodomain_1	0	1	-	8.027213970992095	6.132666665683155	CACATAAAA
chr4	42748107	42748108	chr4:42748108:C:G	rs28710326	C	G	C	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr4	43330325	43330326	chr4:43330326:G:C	rs17596240	G	C	C	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr4	43374474	43374475	chr4:43374475:A:T	rs1533176	A	T	A	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr4	43607743	43607744	chr4:43607744:T:C	rs6813203	T	C	C	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr4	44928632	44928633	chr4:44928633:G:A	rs17654704	G	A	G	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr4	44929558	44929559	chr4:44929559:G:C	rs572702452	G	C	G	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr4	44931726	44931727	chr4:44931727:A:T	rs1496982	A	T	T	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr4	44974282	44974283	chr4:44974283:C:T	rs1497005	C	T	C	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr4	45471936	45471937	chr4:45471937:A:G	rs7683437	A	G	G	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr4	45650728	45650729	chr4:45650729:T:C	rs9994279	T	C	t	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr4	45980178	45980179	chr4:45980179:G:A	rs2089154	G	A	G	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr4	45980180	45980181	chr4:45980181:C:T	rs2089155	C	T	C	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr4	46139480	46139481	chr4:46139481:A:G	rs11939005	A	G	G	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr4	46507095	46507096	chr4:46507096:C:T	rs17640691	C	T	C	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr4	46950453	46950454	chr4:46950454:A:G	rs1512130	A	G	G	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr4	47341053	47341054	chr4:47341054:T:A	rs17600330	T	A	T	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr4	47433297	47433298	chr4:47433298:T:C	rs4403019	T	C	T	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr4	47550946	47550947	chr4:47550947:A:G	rs112932977	A	G	A	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr4	47556114	47556115	chr4:47556115:A:G	rs4694857	A	G	A	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr4	47556136	47556137	chr4:47556137:C:T	rs7686393	C	T	C	Hoxd9.mouse_homeodomain_1	3	1	-	7.075409217893736	8.409487817756228	CCCGTTAAA
chr4	47658631	47658632	chr4:47658632:C:T	rs77637573	C	T	C	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr4	47870733	47870734	chr4:47870734:A:G	rs71614010	A	G	A	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr4	47881735	47881736	chr4:47881736:A:G	rs12506863	A	G	A	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr4	47881745	47881746	chr4:47881746:T:C	rs73244438	T	C	T	Hoxd9.mouse_homeodomain_1	4	1	+	7.889898683853121	5.234852038990543	ACCATAAAA
chr4	47907417	47907418	chr4:47907418:C:T	rs6826909	C	T	T	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr4	47972312	47972313	chr4:47972313:A:G	rs1352391339	A	G	A	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr4	48022362	48022363	chr4:48022363:T:C	rs321622	T	C	T	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr4	48081003	48081004	chr4:48081004:G:A	rs12647931	G	A	G	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr4	48212537	48212538	chr4:48212538:T:C	chr4:48212538:T:C	T	C	T	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr4	48241367	48241368	chr4:48241368:C:T	rs78933973	C	T	C	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr4	48243426	48243427	chr4:48243427:C:A	rs2704390	C	A	A	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr4	48261923	48261924	chr4:48261924:G:T	rs10938526	G	T	G	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr4	48462661	48462662	chr4:48462662:C:G	rs4695382	C	G	C	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr4	48652182	48652183	chr4:48652183:G:A	rs149748620	G	A	G	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr4	48902321	48902322	chr4:48902322:G:A	rs548182149	G	A	G	Hoxd9.mouse_homeodomain_1	2	1	-	7.241935125048919	0.7544946674252814	CCCATACAA
chr4	49523913	49523914	chr4:49523914:G:C	rs201068880	G	C	.	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr4	49523933	49523934	chr4:49523934:G:A	rs1213373968	G	A	.	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr4	49711750	49711751	chr4:49711751:A:T	chr4:49711751:A:T	A	T	.	Hoxd9.mouse_homeodomain_1	6	1	+	7.716978748812629	4.827562978782042	GACATAAAA
chr4	49711756	49711757	chr4:49711757:T:C	rs1418809757	T	C	.	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr4	49711764	49711765	chr4:49711765:T:C	rs879182975	T	C	.	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr4	52094801	52094802	chr4:52094802:G:A	rs34763682	G	A	G	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr4	52106765	52106766	chr4:52106766:C:G	rs78758837	C	G	C	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr4	52367218	52367219	chr4:52367219:G:A	rs959214	G	A	G	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr4	52408656	52408657	chr4:52408657:G:C	rs73145181	G	C	G	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr4	52657537	52657538	chr4:52657538:G:T	rs142832504	G	T	G	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr4	52657557	52657558	chr4:52657558:A:G	rs10014556	A	G	G	Hoxd9.mouse_homeodomain_1	5	1	+	7.716978748812629	1.3427890305660735	GACATAAAA
chr4	52681075	52681076	chr4:52681076:A:C	rs368650649	A	C	A	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr4	52695158	52695159	chr4:52695159:G:A	rs67633188	G	A	A	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr4	52861778	52861779	chr4:52861779:C:A	rs77419314	C	A	C	Hoxd9.mouse_homeodomain_1	3	1	-	7.654940340027237	6.985537803081085	CCCGTAAAA
chr4	52861784	52861785	chr4:52861785:T:G	rs76856111	T	G	T	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr4	52866418	52866419	chr4:52866419:T:C	rs8287	T	C	C	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr4	53055143	53055144	chr4:53055144:G:A	rs1038355	G	A	A	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr4	53267150	53267151	chr4:53267151:T:C	rs17082545	T	C	T	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr4	53591997	53591998	chr4:53591998:T:G	rs7655442	T	G	G	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr4	53601521	53601522	chr4:53601522:C:T	rs530131730	C	T	C	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr4	53608787	53608788	chr4:53608788:A:C	rs2590798	A	C	A	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr4	53636558	53636559	chr4:53636559:A:T	rs115295366	A	T	A	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr4	53676498	53676499	chr4:53676499:G:A	rs2590809	G	A	A	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr4	53684147	53684148	chr4:53684148:G:A	rs66604018	G	A	G	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr4	53899813	53899814	chr4:53899814:A:G	chr4:53899814:A:G	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	7.716978748812629	6.382900148950135	GACATAAAA
chr4	53899833	53899834	chr4:53899834:T:G	rs73817157	T	G	T	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr4	53899836	53899837	chr4:53899837:C:T	rs78474972	C	T	C	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr4	54050155	54050156	chr4:54050156:T:C	rs13144454	T	C	t	Hoxd9.mouse_homeodomain_1	3	1	-	8.678783717710262	7.34470511784777	GCCATAAAA
chr4	54186120	54186121	chr4:54186121:G:A	rs7664768	G	A	G	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr4	54218552	54218553	chr4:54218553:G:A	rs4864856	G	A	A	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr4	54781629	54781630	chr4:54781630:A:G	rs185070388	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.287463081002919	6.953384481140425	CCAATAAAA
chr4	54782036	54782037	chr4:54782037:G:A	rs76627642	G	A	G	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr4	54941869	54941870	chr4:54941870:C:T	rs8180176	C	T	C	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr4	54950832	54950833	chr4:54950833:T:C	rs77033262	T	C	T	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr4	55098397	55098398	chr4:55098398:A:G	rs3816584	A	G	A	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr4	55296204	55296205	chr4:55296205:T:G	rs7669110	T	G	G	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr4	55296441	55296442	chr4:55296442:G:A	rs116603788	G	A	G	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr4	55297490	55297491	chr4:55297491:T:C	rs116684608	T	C	C	Hoxd9.mouse_homeodomain_1	6	1	-	7.091711387329735	0.38788544073800313	CCCATCAAA
chr4	55379469	55379470	chr4:55379470:T:C	rs861029	T	C	T	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr4	55547903	55547904	chr4:55547904:C:T	rs7659053	C	T	C	Hoxd9.mouse_homeodomain_1	2	1	+	7.34470511784777	0.8572646602241328	GCCGTAAAA
chr4	55547922	55547923	chr4:55547923:A:G	rs79709223	A	G	A	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr4	55904749	55904750	chr4:55904750:A:G	rs2702348	A	G	A	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr4	56208384	56208385	chr4:56208385:C:T	rs10017845	C	T	T	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr4	56253882	56253883	chr4:56253883:A:G	rs12506712	A	G	A	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr4	56301426	56301427	chr4:56301427:A:G	chr4:56301427:A:G	A	G	A	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr4	56371516	56371517	chr4:56371517:G:A	rs6554354	G	A	G	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr4	56389174	56389175	chr4:56389175:G:A	rs79592955	G	A	A	Hoxd9.mouse_homeodomain_1	0	1	+	7.9772278588234515	7.188342824966311	GCAATAAAA
chr4	56414220	56414221	chr4:56414221:C:T	rs114308856	C	T	C	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr4	56622358	56622359	chr4:56622359:C:T	rs28621960	C	T	C	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr4	56631597	56631598	chr4:56631598:G:A	rs10030113	G	A	G	Hoxd9.mouse_homeodomain_1	8	1	+	7.212456609225008	8.678783717710262	GCCATAAAG
chr4	56637253	56637254	chr4:56637254:T:G	rs73240571	T	G	T	Hoxd9.mouse_homeodomain_1	8	1	-	8.678783717710262	7.1462160923678635	GCCATAAAA
chr4	56739510	56739511	chr4:56739511:A:G	rs73240590	A	G	A	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr4	56973113	56973114	chr4:56973114:A:T	rs57265257	A	T	A	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr4	57020326	57020327	chr4:57020327:C:T	rs1713984	C	T	C	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr4	57200858	57200859	chr4:57200859:C:G	rs961179141	C	G	C	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr4	57350626	57350627	chr4:57350627:T:C	rs2535497	T	C	C	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr4	57424082	57424083	chr4:57424083:G:A	rs78259127	G	A	G	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr4	57424083	57424084	chr4:57424084:C:T	rs74836783	C	T	C	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr4	57584976	57584977	chr4:57584977:G:A	rs144972353	G	A	G	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr4	58161753	58161754	chr4:58161754:G:A	rs34115745	G	A	G	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr4	59360298	59360299	chr4:59360299:C:T	rs10049657	C	T	C	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr4	59767079	59767080	chr4:59767080:C:T	rs66528936	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	+	8.409487817756228	6.514940512447287	CCCATTAAA
chr4	60249523	60249524	chr4:60249524:C:T	rs28507317	C	T	C	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr4	60884684	60884685	chr4:60884685:C:T	rs62313282	C	T	C	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr4	60963671	60963672	chr4:60963672:G:T	rs6551601	G	T	G	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr4	62181489	62181490	chr4:62181490:G:A	rs60951852	G	A	G	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr4	62513867	62513868	chr4:62513868:G:A	rs10034937	G	A	A	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr4	62526991	62526992	chr4:62526992:C:T	rs114245046	C	T	c	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr4	62717460	62717461	chr4:62717461:C:A	rs114212955	C	A	C	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr4	62814876	62814877	chr4:62814877:A:G	rs11943749	A	G	G	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr4	63569520	63569521	chr4:63569521:G:A	rs11737623	G	A	G	Hoxd9.mouse_homeodomain_1	2	1	-	7.34470511784777	0.8572646602241328	GCCGTAAAA
chr4	63653203	63653204	chr4:63653204:G:A	rs921901	G	A	G	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr4	63938186	63938187	chr4:63938187:A:T	rs73820814	A	T	A	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr4	64340870	64340871	chr4:64340871:G:A	rs282241	G	A	G	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr4	64496017	64496018	chr4:64496018:T:C	rs10471120	T	C	T	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr4	64617869	64617870	chr4:64617870:C:T	rs76333261	C	T	C	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr4	64725096	64725097	chr4:64725097:A:C	rs7692588	A	C	C	Hoxd9.mouse_homeodomain_1	6	1	+	8.98901893988973	7.241935125048919	CCCATAAAA
chr4	65280318	65280319	chr4:65280319:C:T	rs13150883	C	T	T	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr4	65378577	65378578	chr4:65378578:T:G	rs2034538	T	G	G	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr4	65435163	65435164	chr4:65435164:C:A	rs4507418	C	A	C	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr4	65508343	65508344	chr4:65508344:C:T	rs112254133	C	T	C	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr4	65600799	65600800	chr4:65600800:T:C	rs139470545	T	C	T	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr4	65747789	65747790	chr4:65747790:C:T	rs2350334	C	T	t	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr4	65747817	65747818	chr4:65747818:T:C	rs2350335	T	C	t	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr4	66057340	66057341	chr4:66057341:A:C	rs2588665	A	C	C	Hoxd9.mouse_homeodomain_1	0	1	+	7.889898683853121	8.98901893988973	ACCATAAAA
chr4	66468845	66468846	chr4:66468846:T:C	rs58495158	T	C	C	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr4	66814408	66814409	chr4:66814409:G:A	rs12498413	G	A	A	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr4	66899366	66899367	chr4:66899367:A:G	rs6827347	A	G	A	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr4	66932218	66932219	chr4:66932219:T:G	rs28573131	T	G	G	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr4	67000985	67000986	chr4:67000986:T:A	rs13106782	T	A	T	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr4	67010808	67010809	chr4:67010809:G:A	rs35862943	G	A	G	Hoxd9.mouse_homeodomain_1	2	1	-	7.716978748812629	1.2295382911889927	GACATAAAA
chr4	67035842	67035843	chr4:67035843:G:A	rs1435433	G	A	A	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr4	67264386	67264387	chr4:67264387:G:A	rs62315550	G	A	G	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr4	67371882	67371883	chr4:67371883:A:C	rs13112323	A	C	A	Hoxd9.mouse_homeodomain_1	3	1	+	7.716978748812629	1.1414706446091483	GACATAAAA
chr4	67691609	67691610	chr4:67691610:T:C	rs11934367	T	C	T	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr4	68000768	68000769	chr4:68000769:G:T	rs1438411	G	T	g	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr4	68412090	68412091	chr4:68412091:A:G	rs146687438	A	G	a	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr4	68416660	68416661	chr4:68416661:T:C	rs58246549	T	C	t	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr4	68456252	68456253	chr4:68456253:C:T	rs1406701	C	T	T	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr4	68748281	68748282	chr4:68748282:G:A	rs114365974	G	A	G	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr4	68748306	68748307	chr4:68748307:A:G	rs6600842	A	G	A	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr4	68961986	68961987	chr4:68961987:T:C	rs12499093	T	C	T	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr4	69712495	69712496	chr4:69712496:T:C	rs62305388	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.287463081002919	6.953384481140425	CCAATAAAA
chr4	69764108	69764109	chr4:69764109:C:T	rs11249461	C	T	C	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr4	69788301	69788302	chr4:69788302:G:A	rs10013410	G	A	A	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr4	69974717	69974718	chr4:69974718:C:T	rs7356202	C	T	C	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr4	70191802	70191803	chr4:70191803:G:A	rs77875286	G	A	G	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr4	70600733	70600734	chr4:70600734:C:T	rs28509200	C	T	C	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr4	70759330	70759331	chr4:70759331:G:T	rs61440043	G	T	G	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr4	70901651	70901652	chr4:70901652:G:C	rs554653627	G	C	G	Hoxd9.mouse_homeodomain_1	0	1	-	7.091711387329735	6.781476165150267	CCCATCAAA
chr4	70915713	70915714	chr4:70915714:C:A	rs28892406	C	A	A	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr4	71111321	71111322	chr4:71111322:T:G	rs28362153	T	G	G	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr4	71210843	71210844	chr4:71210844:G:A	rs1814082	G	A	G	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr4	71470677	71470678	chr4:71470678:C:T	rs530957354	C	T	C	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr4	71550867	71550868	chr4:71550868:C:T	rs6827792	C	T	T	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr4	72212789	72212790	chr4:72212790:G:A	rs2221941	G	A	G	Hoxd9.mouse_homeodomain_1	2	1	-	8.98901893988973	2.5015784822660927	CCCATAAAA
chr4	72473895	72473896	chr4:72473896:T:C	rs12651548	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.287463081002919	6.953384481140425	CCAATAAAA
chr4	73589663	73589664	chr4:73589664:A:G	rs7658159	A	G	A	Hoxd9.mouse_homeodomain_1	7	1	+	7.241935125048919	0.5381091784571871	CCCATACAA
chr4	73606226	73606227	chr4:73606227:T:C	rs1957660	T	C	T	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr4	73609376	73609377	chr4:73609377:A:T	rs1745289	A	T	A	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr4	73668815	73668816	chr4:73668816:G:T	rs186609395	G	T	G	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr4	73883370	73883371	chr4:73883371:A:T	rs79323340	A	T	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.027213970992095	6.023732834183452	CACATAAAA
chr4	73918188	73918189	chr4:73918189:G:A	rs76246956	G	A	G	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr4	74358872	74358873	chr4:74358873:T:C	rs1350666	T	C	T	Hoxd9.mouse_homeodomain_1	5	1	-	7.9772278588234515	1.603038140576896	GCAATAAAA
chr4	74495366	74495367	chr4:74495367:T:A	rs116338329	T	A	T	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr4	74555231	74555232	chr4:74555232:A:G	rs13136463	A	G	A	Hoxd9.mouse_homeodomain_1	5	1	+	8.287463081002919	1.9132733627563638	CCAATAAAA
chr4	74838853	74838854	chr4:74838854:C:T	rs78804541	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	-	7.1462160923678635	6.357331058510722	GCCATAAAC
chr4	74838867	74838868	chr4:74838868:A:C	rs72857204	A	C	A	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr4	74936756	74936757	chr4:74936757:G:A	rs17248887	G	A	A	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr4	75391850	75391851	chr4:75391851:T:A	rs6828958	T	A	A	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr4	75696326	75696327	chr4:75696327:G:A	rs13146314	G	A	G	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr4	75696339	75696340	chr4:75696340:G:T	rs4859545	G	T	T	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr4	75696345	75696346	chr4:75696346:A:G	rs76807472	A	G	A	Hoxd9.mouse_homeodomain_1	4	1	-	7.716978748812629	5.061932103950051	GACATAAAA
chr4	76054902	76054903	chr4:76054903:T:C	rs4593163	T	C	T	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr4	76213352	76213353	chr4:76213353:A:T	rs145736175	A	T	A	Hoxd9.mouse_homeodomain_1	5	1	+	7.241935125048919	6.662404002915416	CCCATACAA
chr4	76237194	76237195	chr4:76237195:A:G	rs35177915	A	G	G	Hoxd9.mouse_homeodomain_1	3	1	+	8.678783717710262	7.34470511784777	GCCATAAAA
chr4	76535783	76535784	chr4:76535784:T:C	rs10016049	T	C	C	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr4	76568990	76568991	chr4:76568991:A:C	rs11942966	A	C	A	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr4	76640570	76640571	chr4:76640571:G:C	rs4859700	G	C	G	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr4	76688259	76688260	chr4:76688260:G:A	rs78442683	G	A	G	Hoxd9.mouse_homeodomain_1	2	1	-	7.212456609225008	0.7250161516013711	GCCATAAAG
chr4	76833121	76833122	chr4:76833122:A:T	rs72663273	A	T	A	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr4	76856433	76856434	chr4:76856434:C:A	rs17002265	C	A	A	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr4	76984628	76984629	chr4:76984629:A:G	rs918048108	A	G	A	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr4	77047192	77047193	chr4:77047193:A:G	rs7810	A	G	A	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr4	77074026	77074027	chr4:77074027:A:C	chr4:77074027:A:C	A	C	A	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr4	77203785	77203786	chr4:77203786:T:A	rs72863250	T	A	T	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr4	77210424	77210425	chr4:77210425:C:T	rs149256338	C	T	C	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr4	77348105	77348106	chr4:77348106:C:T	rs11930470	C	T	C	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr4	77415928	77415929	chr4:77415929:G:A	rs13138558	G	A	G	Hoxd9.mouse_homeodomain_1	2	1	-	8.027213970992095	1.5397735133684596	CACATAAAA
chr4	77810994	77810995	chr4:77810995:T:G	rs10222901	T	G	T	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr4	78098939	78098940	chr4:78098940:G:A	rs17002936	G	A	G	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr4	78098974	78098975	chr4:78098975:T:C	rs72860615	T	C	A	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr4	78282295	78282296	chr4:78282296:G:A	rs1454892	G	A	G	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr4	78283995	78283996	chr4:78283996:T:A	rs943822	T	A	T	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr4	78288308	78288309	chr4:78288309:G:T	rs13136648	G	T	G	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr4	78294275	78294276	chr4:78294276:C:T	rs10008653	C	T	c	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr4	78644664	78644665	chr4:78644665:A:T	rs7697461	A	T	a	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr4	78821191	78821192	chr4:78821192:G:A	rs1439193172	G	A	G	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr4	78829543	78829544	chr4:78829544:G:A	rs10018189	G	A	A	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr4	79057786	79057787	chr4:79057787:A:G	rs286465	A	G	A	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr4	79227860	79227861	chr4:79227861:A:C	rs4425403	A	C	A	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr4	79771872	79771873	chr4:79771873:A:T	rs4502707	A	T	A	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr4	79855199	79855200	chr4:79855200:G:A	rs111740880	G	A	G	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr4	79898358	79898359	chr4:79898359:T:G	rs6841861	T	G	T	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr4	79980559	79980560	chr4:79980560:A:G	rs13138469	A	G	A	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr4	80198528	80198529	chr4:80198529:A:C	rs12645503	A	C	A	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr4	80264182	80264183	chr4:80264183:C:T	rs569856778	C	T	C	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr4	80540913	80540914	chr4:80540914:C:A	rs374243468	C	A	C	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr4	80567266	80567267	chr4:80567267:C:T	rs7666589	C	T	T	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr4	80758426	80758427	chr4:80758427:G:A	rs572988979	G	A	G	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr4	80816828	80816829	chr4:80816829:G:A	rs73829140	G	A	G	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr4	80956784	80956785	chr4:80956785:T:C	rs1012617	T	C	T	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr4	81036031	81036032	chr4:81036032:A:G	rs10031561	A	G	A	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr4	81068348	81068349	chr4:81068349:G:C	rs2685468	G	C	G	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr4	81135735	81135736	chr4:81135736:C:T	rs1002175692	C	T	G	Hoxd9.mouse_homeodomain_1	2	1	+	7.654940340027237	1.1674998824035994	CCCGTAAAA
chr4	81259378	81259379	chr4:81259379:T:C	rs3098972	T	C	C	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr4	81296377	81296378	chr4:81296378:T:G	rs10488935	T	G	G	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr4	81425046	81425047	chr4:81425047:A:T	rs1452371	A	T	A	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr4	81437205	81437206	chr4:81437206:G:A	rs60314010	G	A	G	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr4	81472707	81472708	chr4:81472708:G:A	rs13353696	G	A	G	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr4	81689624	81689625	chr4:81689625:G:A	rs6839535	G	A	A	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr4	81874818	81874819	chr4:81874819:G:T	rs61588957	G	T	G	Hoxd9.mouse_homeodomain_1	0	1	+	7.716978748812629	6.132666665683155	GACATAAAA
chr4	81914141	81914142	chr4:81914142:G:T	rs1982618	G	T	T	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr4	82136629	82136630	chr4:82136630:T:C	rs56134559	T	C	T	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr4	82372549	82372550	chr4:82372550:A:G	rs992952074	A	G	A	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr4	82373947	82373948	chr4:82373948:C:G	rs532674926	C	G	C	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr4	82635345	82635346	chr4:82635346:A:G	rs6832564	A	G	G	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr4	82652576	82652577	chr4:82652577:A:G	rs11935974	A	G	A	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr4	82678412	82678413	chr4:82678413:A:G	rs4693484	A	G	A	Hoxd9.mouse_homeodomain_1	4	1	-	7.889898683853121	5.234852038990543	ACCATAAAA
chr4	82899016	82899017	chr4:82899017:G:A	rs4302451	G	A	A	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr4	82989558	82989559	chr4:82989559:T:G	rs6841049	T	G	T	Hoxd9.mouse_homeodomain_1	4	1	+	7.889898683853121	1.0480802365225155	ACCATAAAA
chr4	83220099	83220100	chr4:83220100:A:T	rs13101920	A	T	A	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr4	83267808	83267809	chr4:83267809:G:A	rs578234995	G	A	G	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr4	83267848	83267849	chr4:83267849:C:G	rs539302382	C	G	C	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr4	83285679	83285680	chr4:83285680:G:A	rs191703590	G	A	G	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr4	83574602	83574603	chr4:83574603:C:G	rs72654978	C	G	C	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr4	83581448	83581449	chr4:83581449:A:C	rs17355321	A	C	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.409487817756228	1.833979713552747	CCCATTAAA
chr4	83605998	83605999	chr4:83605999:A:G	rs3733331	A	G	A	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr4	83644918	83644919	chr4:83644919:T:C	rs2061408	T	C	T	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr4	83645003	83645004	chr4:83645004:A:G	rs182012333	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	7.9772278588234515	6.643149258960959	GCAATAAAA
chr4	83841822	83841823	chr4:83841823:C:G	rs6821697	C	G	G	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr4	83856971	83856972	chr4:83856972:C:T	rs10000017	C	T	C	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr4	83905745	83905746	chr4:83905746:A:C	rs4693657	A	C	A	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr4	83980173	83980174	chr4:83980174:T:G	rs1876117	T	G	G	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr4	84082001	84082002	chr4:84082002:T:C	rs17008004	T	C	T	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr4	84224823	84224824	chr4:84224824:G:C	rs10011338	G	C	C	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr4	84232493	84232494	chr4:84232494:T:C	chr4:84232494:T:C	T	C	T	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr4	84232523	84232524	chr4:84232524:C:T	rs17363778	C	T	C	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr4	84870306	84870307	chr4:84870307:T:C	rs76514967	T	C	T	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr4	85092987	85092988	chr4:85092988:G:A	rs12513364	G	A	G	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr4	85153877	85153878	chr4:85153878:C:T	rs17009499	C	T	C	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr4	85701189	85701190	chr4:85701190:C:T	rs11731040	C	T	C	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr4	85837772	85837773	chr4:85837773:C:G	rs882639	C	G	C	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr4	86280600	86280601	chr4:86280601:C:A	rs75005409	C	A	C	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr4	86319645	86319646	chr4:86319646:T:C	rs4693140	T	C	T	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr4	86400106	86400107	chr4:86400107:T:C	rs2904095	T	C	C	Hoxd9.mouse_homeodomain_1	3	1	-	7.889898683853121	6.555820083990628	ACCATAAAA
chr4	86401182	86401183	chr4:86401183:C:T	rs4235080	C	T	C	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr4	86789384	86789385	chr4:86789385:T:C	rs28572183	T	C	C	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr4	87065050	87065051	chr4:87065051:G:A	rs10018897	G	A	A	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr4	87065053	87065054	chr4:87065054:G:C	rs10018904	G	C	G	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr4	87067437	87067438	chr4:87067438:C:T	rs2280953	C	T	C	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr4	87204836	87204837	chr4:87204837:G:A	rs113483929	G	A	G	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr4	87400036	87400037	chr4:87400037:C:A	rs9684917	C	A	C	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr4	87420522	87420523	chr4:87420523:G:A	rs6818444	G	A	G	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr4	87883128	87883129	chr4:87883129:G:A	rs10222997	G	A	A	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr4	87883162	87883163	chr4:87883163:A:G	rs10222816	A	G	A	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr4	87896278	87896279	chr4:87896279:G:A	rs2169611	G	A	A	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr4	87947345	87947346	chr4:87947346:G:A	rs7675978	G	A	G	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr4	87947353	87947354	chr4:87947354:G:A	rs7675985	G	A	A	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr4	87955649	87955650	chr4:87955650:T:C	rs57277271	T	C	C	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr4	88143532	88143533	chr4:88143533:C:G	rs45537743	C	G	C	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr4	88225295	88225296	chr4:88225296:T:G	rs200439676	T	G	T	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr4	88285603	88285604	chr4:88285604:A:G	rs4423843	A	G	A	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr4	88765815	88765816	chr4:88765816:G:C	rs7660516	G	C	C	Hoxd9.mouse_homeodomain_1	2	1	-	7.716978748812629	4.248987091360299	GACATAAAA
chr4	89178036	89178037	chr4:89178037:T:C	rs17771380	T	C	T	Hoxd9.mouse_homeodomain_1	5	1	-	8.678783717710262	2.304593999463707	GCCATAAAA
chr4	89195653	89195654	chr4:89195654:A:T	rs10005303	A	T	A	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr4	89212643	89212644	chr4:89212644:C:T	rs499411	C	T	T	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr4	89357653	89357654	chr4:89357654:C:T	rs17833214	C	T	C	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr4	89435693	89435694	chr4:89435694:A:T	rs7691880	A	T	T	Hoxd9.mouse_homeodomain_1	6	1	+	7.212456609225008	4.323040839194422	GCCATAAAG
chr4	89488827	89488828	chr4:89488828:T:C	rs6830052	T	C	C	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr4	89569147	89569148	chr4:89569148:T:C	rs73830637	T	C	T	Hoxd9.mouse_homeodomain_1	6	1	-	8.98901893988973	2.285192993297999	CCCATAAAA
chr4	89752866	89752867	chr4:89752867:A:C	rs34194714	A	C	A	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr4	89975497	89975498	chr4:89975498:C:A	rs2120371	C	A	A	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr4	90082465	90082466	chr4:90082466:T:G	rs111768010	T	G	T	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr4	90220565	90220566	chr4:90220566:A:G	rs17206950	A	G	A	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr4	90291455	90291456	chr4:90291456:C:T	rs113742358	C	T	C	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr4	90318096	90318097	chr4:90318097:G:A	rs532653403	G	A	G	Hoxd9.mouse_homeodomain_1	2	1	-	8.409487817756228	1.922047360132591	CCCATTAAA
chr4	90318507	90318508	chr4:90318508:G:C	rs17016722	G	C	G	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr4	90624508	90624509	chr4:90624509:C:G	rs6829374	C	G	C	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr4	90842051	90842052	chr4:90842052:C:A	rs9999473	C	A	A	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr4	91616337	91616338	chr4:91616338:A:G	rs115783526	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.287463081002919	6.953384481140425	CCAATAAAA
chr4	91643953	91643954	chr4:91643954:G:T	rs114769516	G	T	G	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr4	92470725	92470726	chr4:92470726:T:C	rs12645728	T	C	T	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr4	93217737	93217738	chr4:93217738:A:G	chr4:93217738:A:G	A	G	A	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr4	93352679	93352680	chr4:93352680:T:A	rs1433659	T	A	T	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr4	94069509	94069510	chr4:94069510:A:G	rs28678108	A	G	A	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr4	94407098	94407099	chr4:94407099:C:T	rs17378021	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	-	7.9772278588234515	7.188342824966311	GCAATAAAA
chr4	94532143	94532144	chr4:94532144:T:A	rs2452572	T	A	A	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr4	94691039	94691040	chr4:94691040:A:G	rs72667692	A	G	A	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr4	94737523	94737524	chr4:94737524:C:T	rs1266332114	C	T	C	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr4	94759882	94759883	chr4:94759883:C:T	rs72882298	C	T	C	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr4	94760107	94760108	chr4:94760108:T:C	rs536138372	T	C	T	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr4	94811246	94811247	chr4:94811247:G:A	rs57978667	G	A	G	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr4	95023233	95023234	chr4:95023234:C:T	rs12506593	C	T	T	Hoxd9.mouse_homeodomain_1	2	1	+	7.241935125048919	0.7544946674252814	CCCATACAA
chr4	95213687	95213688	chr4:95213688:T:G	rs1865378	T	G	G	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr4	95382856	95382857	chr4:95382857:T:C	rs10461127	T	C	C	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr4	95432986	95432987	chr4:95432987:T:C	rs1384867	T	C	T	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr4	95452924	95452925	chr4:95452925:T:G	rs265045	T	G	G	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr4	95627061	95627062	chr4:95627062:A:C	rs35403357	A	C	A	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr4	95730078	95730079	chr4:95730079:T:G	rs10212842	T	G	G	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr4	95831425	95831426	chr4:95831426:G:A	rs13107217	G	A	G	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr4	95974198	95974199	chr4:95974199:C:T	rs1378876	C	T	T	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr4	96352505	96352506	chr4:96352506:A:G	rs9998383	A	G	A	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr4	96371163	96371164	chr4:96371164:C:T	rs146831104	C	T	C	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr4	96647782	96647783	chr4:96647783:G:A	rs4699531	G	A	A	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr4	96816125	96816126	chr4:96816126:A:G	rs66869144	A	G	A	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr4	97628149	97628150	chr4:97628150:T:G	rs115727694	T	G	T	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr4	98467701	98467702	chr4:98467702:A:G	rs17027603	A	G	G	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr4	98696115	98696116	chr4:98696116:A:G	rs1003174	A	G	A	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr4	99372582	99372583	chr4:99372583:C:T	rs35302924	C	T	C	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr4	99405425	99405426	chr4:99405426:T:C	rs1442489	T	C	C	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr4	99541630	99541631	chr4:99541631:C:T	chr4:99541631:C:T	C	T	C	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr4	99712212	99712213	chr4:99712213:A:G	rs115713806	A	G	A	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr4	99814025	99814026	chr4:99814026:C:T	rs140534391	C	T	C	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr4	99952169	99952170	chr4:99952170:C:G	rs902175371	C	G	C	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr4	100072153	100072154	chr4:100072154:C:T	rs79499245	C	T	C	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr4	100075949	100075950	chr4:100075950:A:G	rs77749573	A	G	A	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr4	100287664	100287665	chr4:100287665:G:T	rs72915536	G	T	G	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr4	100287744	100287745	chr4:100287745:G:A	rs80229744	G	A	G	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr4	100366569	100366570	chr4:100366570:C:G	rs35504159	C	G	C	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr4	100521725	100521726	chr4:100521726:C:T	rs72692165	C	T	C	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr4	100722348	100722349	chr4:100722349:T:C	rs142444194	T	C	T	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr4	100949306	100949307	chr4:100949307:G:A	rs13136799	G	A	G	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr4	101036502	101036503	chr4:101036503:C:T	rs2037772	C	T	C	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr4	101036503	101036504	chr4:101036504:G:A	rs114560945	G	A	G	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr4	101139374	101139375	chr4:101139375:C:T	rs34505183	C	T	C	Hoxd9.mouse_homeodomain_1	1	1	+	8.409487817756228	7.094685903423221	CCCATTAAA
chr4	101346295	101346296	chr4:101346296:G:A	rs2583391	G	A	a	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr4	101419249	101419250	chr4:101419250:A:G	rs75339186	A	G	A	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr4	101599627	101599628	chr4:101599628:C:T	rs2723053	C	T	T	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr4	101605344	101605345	chr4:101605345:G:A	rs11939785	G	A	G	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr4	101701404	101701405	chr4:101701405:A:C	rs28730977	A	C	C	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr4	101753531	101753532	chr4:101753532:C:G	rs7674411	C	G	t	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr4	101955178	101955179	chr4:101955179:C:T	rs2276334	C	T	C	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr4	101955186	101955187	chr4:101955187:C:T	rs2276333	C	T	C	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr4	102241403	102241404	chr4:102241404:G:T	rs34185522	G	T	G	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr4	102473945	102473946	chr4:102473946:C:G	rs4456957	C	G	C	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr4	102640772	102640773	chr4:102640773:A:C	rs6854831	A	C	A	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr4	102678363	102678364	chr4:102678364:G:A	rs17033138	G	A	G	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr4	102743723	102743724	chr4:102743724:G:A	rs188762426	G	A	G	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr4	102799708	102799709	chr4:102799709:G:C	rs3774987	G	C	C	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr4	102805906	102805907	chr4:102805907:T:C	rs61735688	T	C	T	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr4	102849690	102849691	chr4:102849691:A:G	rs113254241	A	G	A	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr4	103009353	103009354	chr4:103009354:T:C	rs4698874	T	C	T	Hoxd9.mouse_homeodomain_1	5	1	-	7.212456609225008	0.8382668909784519	GCCATAAAG
chr4	103016775	103016776	chr4:103016776:T:C	rs7676765	T	C	C	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr4	103498798	103498799	chr4:103498799:G:A	rs340471	G	A	G	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr4	103895768	103895769	chr4:103895769:A:G	rs6533114	A	G	.	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr4	104490024	104490025	chr4:104490025:A:G	rs28480557	A	G	A	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr4	104506724	104506725	chr4:104506725:C:T	rs11737894	C	T	C	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr4	104895740	104895741	chr4:104895741:T:C	rs9998015	T	C	C	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr4	105543827	105543828	chr4:105543828:G:A	rs2158202	G	A	G	Hoxd9.mouse_homeodomain_1	0	1	+	8.678783717710262	7.889898683853121	GCCATAAAA
chr4	105821058	105821059	chr4:105821059:T:C	rs17036292	T	C	T	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr4	105910142	105910143	chr4:105910143:C:T	rs73839086	C	T	C	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr4	105978680	105978681	chr4:105978681:T:C	rs11097908	T	C	T	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr4	105978716	105978717	chr4:105978717:T:C	rs7662283	T	C	T	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr4	106183541	106183542	chr4:106183542:T:C	rs6843870	T	C	T	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr4	106192141	106192142	chr4:106192142:A:G	rs2290607	A	G	G	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr4	106370370	106370371	chr4:106370371:G:C	rs12648091	G	C	G	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr4	106422997	106422998	chr4:106422998:T:A	rs185831002	T	A	T	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr4	106582895	106582896	chr4:106582896:A:G	rs17292591	A	G	A	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr4	106616232	106616233	chr4:106616233:A:G	rs1023792	A	G	A	Hoxd9.mouse_homeodomain_1	4	1	-	7.9772278588234515	5.3221812139608735	GCAATAAAA
chr4	106984350	106984351	chr4:106984351:G:A	rs2866908	G	A	G	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr4	107305085	107305086	chr4:107305086:G:A	rs78040780	G	A	G	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr4	107571208	107571209	chr4:107571209:C:T	rs1355990	C	T	T	Hoxd9.mouse_homeodomain_1	0	1	+	8.98901893988973	7.094471634580788	CCCATAAAA
chr4	107718281	107718282	chr4:107718282:T:A	rs3805350	T	A	T	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr4	107932691	107932692	chr4:107932692:G:A	rs9995856	G	A	G	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr4	108054094	108054095	chr4:108054095:T:G	rs10025431	T	G	T	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr4	108059252	108059253	chr4:108059253:C:T	rs57340953	C	T	C	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr4	108059262	108059263	chr4:108059263:G:A	rs17038518	G	A	G	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr4	108059275	108059276	chr4:108059276:A:G	rs55850632	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	7.091711387329735	5.757632787467242	CCCATCAAA
chr4	108371288	108371289	chr4:108371289:G:A	rs12643046	G	A	G	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr4	108446748	108446749	chr4:108446749:G:C	rs147609497	G	C	G	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr4	108644578	108644579	chr4:108644579:C:T	rs2575603	C	T	T	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr4	108886326	108886327	chr4:108886327:T:C	rs10452183	T	C	C	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr4	108988370	108988371	chr4:108988371:A:C	rs2113971	A	C	A	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr4	109024002	109024003	chr4:109024003:C:T	rs11098027	C	T	T	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr4	109072883	109072884	chr4:109072884:G:A	rs565713396	G	A	g	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr4	109638025	109638026	chr4:109638026:T:A	rs11947977	T	A	T	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr4	109801729	109801730	chr4:109801730:T:C	rs7671905	T	C	T	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr4	109839784	109839785	chr4:109839785:A:G	rs7664699	A	G	A	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr4	110295430	110295431	chr4:110295431:G:T	rs244052	G	T	T	Hoxd9.mouse_homeodomain_1	1	1	-	8.099252595576761	7.137447626679127	GCCATTAAA
chr4	110396481	110396482	chr4:110396482:G:A	rs34817391	G	A	G	Hoxd9.mouse_homeodomain_1	2	1	-	8.678783717710262	2.1913432600866263	GCCATAAAA
chr4	110954102	110954103	chr4:110954103:G:A	rs10004398	G	A	A	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr4	111502870	111502871	chr4:111502871:A:G	rs1503650	A	G	A	Hoxd9.mouse_homeodomain_1	5	1	+	7.9772278588234515	1.603038140576896	GCAATAAAA
chr4	111836665	111836666	chr4:111836666:G:A	rs432516	G	A	A	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr4	111836667	111836668	chr4:111836668:T:G	rs398134	T	G	T	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr4	111937986	111937987	chr4:111937987:A:C	rs78305663	A	C	A	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr4	111992576	111992577	chr4:111992577:A:C	rs4834118	A	C	C	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr4	112083460	112083461	chr4:112083461:T:C	rs529701466	T	C	T	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr4	112284386	112284387	chr4:112284387:C:T	rs4834254	C	T	C	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr4	112322108	112322109	chr4:112322109:C:T	rs6810537	C	T	T	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr4	112512137	112512138	chr4:112512138:T:C	rs6848238	T	C	T	Hoxd9.mouse_homeodomain_1	6	1	-	8.98901893988973	2.285192993297999	CCCATAAAA
chr4	113070764	113070765	chr4:113070765:G:C	rs7692578	G	C	G	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr4	113109423	113109424	chr4:113109424:G:A	rs7679106	G	A	G	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr4	113584887	113584888	chr4:113584888:G:A	rs746615554	G	A	G	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr4	113645829	113645830	chr4:113645830:A:G	rs542506801	A	G	A	Hoxd9.mouse_homeodomain_1	8	1	+	8.027213970992095	6.560886862506841	CACATAAAA
chr4	113738593	113738594	chr4:113738594:A:G	rs1015960976	A	G	A	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr4	113763433	113763434	chr4:113763434:T:C	rs1228266525	T	C	T	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr4	113820405	113820406	chr4:113820406:A:G	rs34182476	A	G	A	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr4	114136413	114136414	chr4:114136414:C:A	rs567067645	C	A	C	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr4	114193526	114193527	chr4:114193527:A:G	rs1497583	A	G	A	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr4	114314293	114314294	chr4:114314294:A:G	rs11724000	A	G	A	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr4	114602785	114602786	chr4:114602786:T:A	rs74504819	T	A	T	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr4	114880444	114880445	chr4:114880445:T:C	rs111323245	T	C	T	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr4	114930338	114930339	chr4:114930339:G:T	rs35423038	G	T	T	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr4	115101904	115101905	chr4:115101905:G:A	rs532923	G	A	G	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr4	115128286	115128287	chr4:115128287:T:C	rs503251	T	C	T	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr4	115345651	115345652	chr4:115345652:A:T	rs11937188	A	T	A	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr4	115553503	115553504	chr4:115553504:G:T	rs6831946	G	T	G	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr4	115781723	115781724	chr4:115781724:C:T	rs11098316	C	T	T	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr4	115955282	115955283	chr4:115955283:A:G	rs12499372	A	G	A	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr4	116122194	116122195	chr4:116122195:T:C	rs814375	T	C	T	Hoxd9.mouse_homeodomain_1	4	1	+	8.98901893988973	6.333972295027152	CCCATAAAA
chr4	117325237	117325238	chr4:117325238:T:C	rs4561983	T	C	T	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr4	117325252	117325253	chr4:117325253:C:A	rs74870429	C	A	C	Hoxd9.mouse_homeodomain_1	1	1	+	7.9772278588234515	7.0154228899258175	GCAATAAAA
chr4	117491231	117491232	chr4:117491232:T:A	rs9993338	T	A	A	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr4	117758229	117758230	chr4:117758230:C:G	rs17865893	C	G	C	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr4	117758269	117758270	chr4:117758270:A:G	rs17866932	A	G	G	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr4	117758276	117758277	chr4:117758277:G:T	rs17865955	G	T	G	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr4	118328106	118328107	chr4:118328107:A:G	rs788654	A	G	G	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr4	118344932	118344933	chr4:118344933:C:T	rs78167655	C	T	C	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr4	118712974	118712975	chr4:118712975:T:C	rs419292	T	C	C	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr4	118788260	118788261	chr4:118788261:A:G	rs13128195	A	G	A	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr4	118918009	118918010	chr4:118918010:C:T	rs17050285	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	+	7.091711387329735	5.197164082020794	CCCATCAAA
chr4	118973522	118973523	chr4:118973523:A:G	rs899563109	A	G	A	Hoxd9.mouse_homeodomain_1	5	1	+	7.889898683853121	1.5157089656065659	ACCATAAAA
chr4	118973618	118973619	chr4:118973619:G:A	rs12502164	G	A	G	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr4	119059434	119059435	chr4:119059435:C:T	rs1058449	C	T	C	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr4	119104947	119104948	chr4:119104948:C:G	rs6852315	C	G	G	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr4	119117488	119117489	chr4:119117489:G:A	rs182937934	G	A	G	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr4	119591352	119591353	chr4:119591353:T:C	rs6842674	T	C	C	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr4	119622017	119622018	chr4:119622018:C:T	rs13136462	C	T	C	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr4	120070282	120070283	chr4:120070283:G:A	rs6817243	G	A	G	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr4	120156653	120156654	chr4:120156654:A:G	rs72668836	A	G	A	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr4	120239380	120239381	chr4:120239381:G:A	rs2662734	G	A	G	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr4	120653812	120653813	chr4:120653813:T:G	rs78084461	T	G	T	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr4	120714442	120714443	chr4:120714443:G:C	rs71600499	G	C	G	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr4	120960843	120960844	chr4:120960844:A:G	rs6817608	A	G	A	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr4	120995897	120995898	chr4:120995898:A:G	rs59058031	A	G	A	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr4	121008065	121008066	chr4:121008066:C:T	rs4484323	C	T	T	Hoxd9.mouse_homeodomain_1	2	1	+	8.099252595576761	1.6118121379531245	GCCATTAAA
chr4	121396953	121396954	chr4:121396954:A:G	rs6828201	A	G	G	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr4	121736831	121736832	chr4:121736832:C:G	rs6852154	C	G	C	Hoxd9.mouse_homeodomain_1	1	1	+	7.075409217893736	0.6658759891113694	CCCGTTAAA
chr4	121829733	121829734	chr4:121829734:T:C	rs72680759	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.287463081002919	6.953384481140425	CCAATAAAA
chr4	122077210	122077211	chr4:122077211:A:G	rs3915233	A	G	a	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr4	122082924	122082925	chr4:122082925:A:G	rs80082201	A	G	A	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr4	122578955	122578956	chr4:122578956:T:C	rs10212828	T	C	C	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr4	122786565	122786566	chr4:122786566:A:G	rs71631415	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	7.091711387329735	5.757632787467242	CCCATCAAA
chr4	122968601	122968602	chr4:122968602:C:T	rs4833849	C	T	C	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr4	123211372	123211373	chr4:123211373:T:C	rs303100	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.287463081002919	6.953384481140425	CCAATAAAA
chr4	123415223	123415224	chr4:123415224:C:T	rs12650992	C	T	C	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr4	123444494	123444495	chr4:123444495:G:A	rs190634585	G	A	G	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr4	123613836	123613837	chr4:123613837:A:T	rs77431781	A	T	a	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr4	123720499	123720500	chr4:123720500:A:C	rs112130403	A	C	A	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr4	124060741	124060742	chr4:124060742:T:G	chr4:124060742:T:G	T	G	T	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr4	124266892	124266893	chr4:124266893:C:T	rs725001	C	T	T	Hoxd9.mouse_homeodomain_1	8	1	-	7.522691831404475	8.98901893988973	CCCATAAAG
chr4	124451000	124451001	chr4:124451001:G:T	rs62323549	G	T	G	Hoxd9.mouse_homeodomain_1	0	1	-	8.027213970992095	6.928093714955487	CACATAAAA
chr4	124591745	124591746	chr4:124591746:C:G	rs13104872	C	G	C	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr4	124986327	124986328	chr4:124986328:G:A	rs4834011	G	A	G	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr4	124998768	124998769	chr4:124998769:T:C	rs13135635	T	C	C	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr4	125090890	125090891	chr4:125090891:C:T	rs35600865	C	T	C	Hoxd9.mouse_homeodomain_1	1	1	+	8.678783717710262	7.363981803377255	GCCATAAAA
chr4	125448123	125448124	chr4:125448124:G:T	rs6846428	G	T	G	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr4	125538566	125538567	chr4:125538567:T:G	rs74834478	T	G	T	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr4	125546899	125546900	chr4:125546900:A:G	rs7678804	A	G	G	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr4	125728998	125728999	chr4:125728999:A:T	rs75663252	A	T	A	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr4	125821601	125821602	chr4:125821602:T:C	rs12505119	T	C	T	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr4	125838674	125838675	chr4:125838675:A:G	rs1847917	A	G	G	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr4	126134647	126134648	chr4:126134648:G:T	rs12502707	G	T	G	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr4	126182836	126182837	chr4:126182837:T:C	rs6839628	T	C	C	Hoxd9.mouse_homeodomain_1	8	1	-	7.889898683853121	6.423571575367866	ACCATAAAA
chr4	126445657	126445658	chr4:126445658:A:G	rs9996313	A	G	G	Hoxd9.mouse_homeodomain_1	6	1	+	7.45645131454733	0.752625367955599	CCCATAAAC
chr4	126476062	126476063	chr4:126476063:A:C	rs74590069	A	C	A	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr4	126630200	126630201	chr4:126630201:A:G	rs73846055	A	G	A	Hoxd9.mouse_homeodomain_1	7	1	+	7.212456609225008	0.5086306626332764	GCCATAAAG
chr4	126738308	126738309	chr4:126738309:C:T	rs191049311	C	T	C	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr4	126752393	126752394	chr4:126752394:G:A	rs13105329	G	A	a	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr4	126954518	126954519	chr4:126954519:A:C	rs1510687	A	C	C	Hoxd9.mouse_homeodomain_1	6	1	+	8.027213970992095	6.2801301561512854	CACATAAAA
chr4	126954535	126954536	chr4:126954536:A:G	rs1510688	A	G	A	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr4	127214337	127214338	chr4:127214338:T:C	chr4:127214338:T:C	T	C	T	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr4	127282072	127282073	chr4:127282073:A:C	rs4834189	A	C	A	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr4	127400676	127400677	chr4:127400677:T:C	rs4374636	T	C	T	Hoxd9.mouse_homeodomain_1	6	1	-	8.027213970992095	1.3233880244003648	CACATAAAA
chr4	128062769	128062770	chr4:128062770:G:T	rs4834225	G	T	G	Hoxd9.mouse_homeodomain_1	2	1	-	7.522691831404475	6.821135972517665	CCCATAAAG
chr4	128384494	128384495	chr4:128384495:T:C	rs12643763	T	C	T	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr4	128461478	128461479	chr4:128461479:G:A	rs17013332	G	A	G	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr4	128503275	128503276	chr4:128503276:G:A	rs9683447	G	A	G	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr4	128653753	128653754	chr4:128653754:T:C	rs1499109	T	C	T	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr4	128653771	128653772	chr4:128653772:T:C	rs17013522	T	C	T	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr4	128700824	128700825	chr4:128700825:A:G	rs72681633	A	G	A	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr4	128753868	128753869	chr4:128753869:G:T	rs6820206	G	T	T	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr4	128958588	128958589	chr4:128958589:G:A	rs921377	G	A	G	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr4	129034776	129034777	chr4:129034777:C:T	rs34145504	C	T	c	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr4	129335646	129335647	chr4:129335647:C:T	rs72688751	C	T	C	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr4	129392863	129392864	chr4:129392864:C:T	rs72672120	C	T	C	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr4	129430646	129430647	chr4:129430647:G:A	rs72672154	G	A	G	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr4	129999618	129999619	chr4:129999619:A:G	rs2968927	A	G	A	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr4	130575530	130575531	chr4:130575531:G:A	rs4296689	G	A	A	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr4	130712340	130712341	chr4:130712341:T:C	rs12505701	T	C	C	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr4	131547916	131547917	chr4:131547917:T:A	rs350999	T	A	A	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr4	131774646	131774647	chr4:131774647:T:A	rs1054954	T	A	T	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr4	131857498	131857499	chr4:131857499:C:T	rs67989879	C	T	C	Hoxd9.mouse_homeodomain_1	2	1	+	7.075409217893736	0.5879687602700975	CCCGTTAAA
chr4	131880528	131880529	chr4:131880529:C:T	rs115593006	C	T	C	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr4	133059047	133059048	chr4:133059048:C:A	rs7692663	C	A	A	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr4	133130043	133130044	chr4:133130044:G:T	rs75048365	G	T	G	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr4	133287724	133287725	chr4:133287725:G:A	rs77644273	G	A	G	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr4	133556725	133556726	chr4:133556726:G:T	rs1389332	G	T	T	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr4	134011763	134011764	chr4:134011764:G:A	rs11946632	G	A	G	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr4	134132106	134132107	chr4:134132107:A:G	rs7687828	A	G	A	Hoxd9.mouse_homeodomain_1	8	1	+	8.98901893988973	7.522691831404475	CCCATAAAA
chr4	134374265	134374266	chr4:134374266:G:A	rs7693537	G	A	G	Hoxd9.mouse_homeodomain_1	3	1	+	7.654940340027237	8.98901893988973	CCCGTAAAA
chr4	134544647	134544648	chr4:134544648:C:T	rs74438518	C	T	C	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr4	134559095	134559096	chr4:134559096:G:A	rs62314685	G	A	G	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr4	135917382	135917383	chr4:135917383:A:G	rs34212741	A	G	A	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr4	136450230	136450231	chr4:136450231:T:C	rs11733392	T	C	C	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr4	136680603	136680604	chr4:136680604:G:C	rs4241968	G	C	C	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr4	136797299	136797300	chr4:136797300:G:A	rs4864364	G	A	G	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr4	136804841	136804842	chr4:136804842:G:A	rs11724085	G	A	g	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr4	136832269	136832270	chr4:136832270:T:G	rs1460150	T	G	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.98901893988973	2.4135108356862487	CCCATAAAA
chr4	137125174	137125175	chr4:137125175:G:A	rs116123351	G	A	G	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr4	137190504	137190505	chr4:137190505:G:A	rs7660328	G	A	g	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr4	137738220	137738221	chr4:137738221:C:G	rs6816674	C	G	G	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr4	137775794	137775795	chr4:137775795:A:G	rs112393785	A	G	A	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr4	138203134	138203135	chr4:138203135:T:C	rs12644169	T	C	T	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr4	138235505	138235506	chr4:138235506:C:T	rs10519451	C	T	C	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr4	138406055	138406056	chr4:138406056:C:T	rs4863798	C	T	T	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr4	138435135	138435136	chr4:138435136:G:A	rs55752370	G	A	A	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr4	138495091	138495092	chr4:138495092:G:C	rs7662531	G	C	C	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr4	138517283	138517284	chr4:138517284:C:T	rs299124	C	T	C	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr4	138562977	138562978	chr4:138562978:T:A	rs72718533	T	A	T	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr4	138595202	138595203	chr4:138595203:T:C	rs1450442	T	C	T	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr4	138597396	138597397	chr4:138597397:C:T	rs4863480	C	T	T	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr4	138597411	138597412	chr4:138597412:C:G	rs4863481	C	G	C	Hoxd9.mouse_homeodomain_1	0	1	+	8.409487817756228	8.099252595576761	CCCATTAAA
chr4	138602644	138602645	chr4:138602645:C:T	rs6844523	C	T	T	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr4	138645344	138645345	chr4:138645345:C:T	rs4863573	C	T	T	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr4	138651179	138651180	chr4:138651180:G:A	rs10000095	G	A	A	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr4	138727820	138727821	chr4:138727821:A:G	rs140363421	A	G	A	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr4	138876025	138876026	chr4:138876026:C:G	rs200165762	C	G	C	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr4	138876041	138876042	chr4:138876042:G:A	rs143761665	G	A	g	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr4	139043440	139043441	chr4:139043441:G:T	rs1456216413	G	T	G	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr4	139178494	139178495	chr4:139178495:C:T	rs113739808	C	T	C	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr4	139254161	139254162	chr4:139254162:T:G	rs6836792	T	G	t	Hoxd9.mouse_homeodomain_1	8	1	-	7.9772278588234515	6.444660233481052	GCAATAAAA
chr4	139419539	139419540	chr4:139419540:A:G	rs55931459	A	G	G	Hoxd9.mouse_homeodomain_1	3	1	+	8.678783717710262	7.34470511784777	GCCATAAAA
chr4	139447104	139447105	chr4:139447105:G:A	rs372510964	G	A	g	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr4	139528922	139528923	chr4:139528923:G:A	rs72726570	G	A	G	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr4	139560355	139560356	chr4:139560356:A:G	rs706310	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.027213970992095	6.693135371129603	CACATAAAA
chr4	139721102	139721103	chr4:139721103:G:A	rs17050884	G	A	G	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr4	140012938	140012939	chr4:140012939:G:A	rs116252505	G	A	G	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr4	140038439	140038440	chr4:140038440:G:A	rs6851301	G	A	A	Hoxd9.mouse_homeodomain_1	2	1	-	8.98901893988973	2.5015784822660927	CCCATAAAA
chr4	140134815	140134816	chr4:140134816:G:A	rs13149768	G	A	G	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr4	140180729	140180730	chr4:140180730:T:A	rs73857953	T	A	T	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr4	140267247	140267248	chr4:140267248:T:C	rs6536830	T	C	C	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr4	140363043	140363044	chr4:140363044:C:T	rs7663838	C	T	c	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr4	141214415	141214416	chr4:141214416:A:G	rs12646903	A	G	A	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr4	141238904	141238905	chr4:141238905:G:A	rs58984826	G	A	G	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr4	141339267	141339268	chr4:141339268:T:G	rs10003871	T	G	G	Hoxd9.mouse_homeodomain_1	4	1	+	7.212456609225008	0.3706381618944015	GCCATAAAG
chr4	141706307	141706308	chr4:141706308:T:G	rs7671458	T	G	G	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr4	141804427	141804428	chr4:141804428:T:C	rs7656341	T	C	C	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr4	142142481	142142482	chr4:142142482:A:T	rs336397	A	T	A	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr4	142191555	142191556	chr4:142191556:C:G	rs1497140	C	G	C	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr4	142194938	142194939	chr4:142194939:A:T	rs2636666	A	T	a	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr4	142407183	142407184	chr4:142407184:T:C	rs74908743	T	C	T	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr4	142451650	142451651	chr4:142451651:T:C	rs180702972	T	C	T	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr4	142547579	142547580	chr4:142547580:G:T	rs4975313	G	T	G	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr4	142690981	142690982	chr4:142690982:T:G	chr4:142690982:T:G	T	G	T	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr4	143127882	143127883	chr4:143127883:T:C	rs7663553	T	C	T	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr4	143288264	143288265	chr4:143288265:A:C	rs300946	A	C	C	Hoxd9.mouse_homeodomain_1	7	1	+	7.241935125048919	4.352519355018332	CCCATACAA
chr4	143522196	143522197	chr4:143522197:C:T	rs7685063	C	T	T	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr4	143562194	143562195	chr4:143562195:C:T	rs2291811	C	T	C	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr4	143781680	143781681	chr4:143781681:C:T	rs7687151	C	T	.	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr4	144502815	144502816	chr4:144502816:A:C	rs973796	A	C	A	Hoxd9.mouse_homeodomain_1	6	1	+	7.9772278588234515	6.230144043982641	GCAATAAAA
chr4	145480697	145480698	chr4:145480698:A:C	rs80240946	A	C	A	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr4	145481366	145481367	chr4:145481367:C:G	rs1034935561	C	G	C	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr4	145537917	145537918	chr4:145537918:A:C	rs150504007	A	C	A	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr4	145805045	145805046	chr4:145805046:T:C	rs17020598	T	C	T	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr4	145944997	145944998	chr4:145944998:C:A	rs7659884	C	A	C	Hoxd9.mouse_homeodomain_1	8	1	-	7.212456609225008	5.746270592944195	GCCATAAAG
chr4	146075502	146075503	chr4:146075503:C:A	rs10008218	C	A	C	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr4	146333081	146333082	chr4:146333082:G:T	rs6857518	G	T	T	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr4	146343664	146343665	chr4:146343665:T:A	rs77083586	T	A	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.98901893988973	6.985537803081085	CCCATAAAA
chr4	146368616	146368617	chr4:146368617:T:C	rs6846846	T	C	T	Hoxd9.mouse_homeodomain_1	4	1	+	7.889898683853121	5.234852038990543	ACCATAAAA
chr4	146521153	146521154	chr4:146521154:G:C	rs75040117	G	C	g	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr4	146521178	146521179	chr4:146521179:G:A	rs1004802666	G	A	g	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr4	146834759	146834760	chr4:146834760:T:C	rs17609899	T	C	C	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr4	147060914	147060915	chr4:147060915:A:G	rs115058519	A	G	A	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr4	147060922	147060923	chr4:147060923:G:C	rs151042415	G	C	G	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr4	147094297	147094298	chr4:147094298:G:A	rs60132894	G	A	G	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr4	147527412	147527413	chr4:147527413:G:A	rs10028507	G	A	A	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr4	147854236	147854237	chr4:147854237:T:G	rs10021936	T	G	T	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr4	148261989	148261990	chr4:148261990:A:G	rs72655242	A	G	A	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr4	148312847	148312848	chr4:148312848:T:A	rs61761510	T	A	T	Hoxd9.mouse_homeodomain_1	5	1	-	8.98901893988973	8.409487817756228	CCCATAAAA
chr4	148410495	148410496	chr4:148410496:C:T	rs17582031	C	T	T	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr4	148469307	148469308	chr4:148469308:G:A	rs35056096	G	A	G	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr4	148654432	148654433	chr4:148654433:G:A	rs147793168	G	A	G	Hoxd9.mouse_homeodomain_1	3	1	+	7.34470511784777	8.678783717710262	GCCGTAAAA
chr4	148692871	148692872	chr4:148692872:T:C	rs7666326	T	C	C	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr4	148730500	148730501	chr4:148730501:C:G	rs6535634	C	G	G	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr4	149897509	149897510	chr4:149897510:G:A	rs6852150	G	A	A	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr4	150020309	150020310	chr4:150020310:T:C	rs6826455	T	C	C	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr4	150069542	150069543	chr4:150069543:G:A	rs6825176	G	A	G	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr4	150073140	150073141	chr4:150073141:A:C	rs62339890	A	C	A	Hoxd9.mouse_homeodomain_1	7	1	+	8.409487817756228	5.520072047725641	CCCATTAAA
chr4	150171189	150171190	chr4:150171190:G:A	rs72730398	G	A	G	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr4	150533901	150533902	chr4:150533902:G:A	rs28550140	G	A	G	Hoxd9.mouse_homeodomain_1	2	1	-	8.678783717710262	2.1913432600866263	GCCATAAAA
chr4	150533928	150533929	chr4:150533929:C:T	rs1995540	C	T	T	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr4	150913933	150913934	chr4:150913934:C:T	chr4:150913934:C:T	C	T	C	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr4	151217614	151217615	chr4:151217615:C:T	rs11099792	C	T	T	Hoxd9.mouse_homeodomain_1	2	1	+	8.027213970992095	1.5397735133684596	CACATAAAA
chr4	151296345	151296346	chr4:151296346:G:C	rs3990708	G	C	G	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr4	151462809	151462810	chr4:151462810:T:C	rs10454251	T	C	C	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr4	151530300	151530301	chr4:151530301:G:A	rs1372976	G	A	A	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr4	151641573	151641574	chr4:151641574:T:C	rs6811676	T	C	t	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr4	151672236	151672237	chr4:151672237:C:G	rs767868731	C	G	C	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr4	151690723	151690724	chr4:151690724:A:G	chr4:151690724:A:G	A	G	A	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr4	152054998	152054999	chr4:152054999:G:A	rs6535832	G	A	A	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr4	152599243	152599244	chr4:152599244:T:C	rs80221030	T	C	T	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr4	152663113	152663114	chr4:152663114:T:A	rs75122642	T	A	C	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr4	152735485	152735486	chr4:152735486:T:A	rs114613434	T	A	T	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr4	152786693	152786694	chr4:152786694:C:G	rs7439700	C	G	C	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr4	152957327	152957328	chr4:152957328:A:G	rs867322	A	G	A	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr4	152991959	152991960	chr4:152991960:C:T	rs34420948	C	T	C	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr4	153109017	153109018	chr4:153109018:A:G	rs7659935	A	G	G	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr4	153119062	153119063	chr4:153119063:C:T	rs6849116	C	T	T	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr4	153120463	153120464	chr4:153120464:A:G	rs34144107	A	G	A	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr4	153191536	153191537	chr4:153191537:T:A	rs4435731	T	A	A	Hoxd9.mouse_homeodomain_1	8	1	-	7.241935125048919	4.309422000282851	CCCATACAA
chr4	153233791	153233792	chr4:153233792:A:G	rs147630996	A	G	A	Hoxd9.mouse_homeodomain_1	4	1	-	7.889898683853121	5.234852038990543	ACCATAAAA
chr4	153434045	153434046	chr4:153434046:T:G	rs77550559	T	G	T	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr4	153451348	153451349	chr4:153451349:G:A	rs72969166	G	A	G	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr4	153529664	153529665	chr4:153529665:G:T	rs77671437	G	T	G	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr4	153532328	153532329	chr4:153532329:C:T	rs6813917	C	T	C	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr4	153834702	153834703	chr4:153834703:G:A	rs13135405	G	A	G	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr4	153931488	153931489	chr4:153931489:T:C	rs13137572	T	C	C	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr4	153962340	153962341	chr4:153962341:G:A	rs6818192	G	A	G	Hoxd9.mouse_homeodomain_1	0	1	-	8.287463081002919	6.392915775693977	CCAATAAAA
chr4	154317189	154317190	chr4:154317190:A:G	rs13111065	A	G	A	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr4	154462552	154462553	chr4:154462553:T:G	rs74549633	T	G	T	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr4	154499656	154499657	chr4:154499657:G:A	rs6819398	G	A	A	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr4	154745925	154745926	chr4:154745926:T:C	rs17031988	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.45645131454733	6.122372714684838	CCCATAAAC
chr4	154971563	154971564	chr4:154971564:A:G	rs9998189	A	G	A	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr4	155038652	155038653	chr4:155038653:C:A	rs76989278	C	A	C	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr4	155229521	155229522	chr4:155229522:T:C	rs80150748	T	C	T	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr4	155532870	155532871	chr4:155532871:A:T	rs78717665	A	T	A	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr4	155583324	155583325	chr4:155583325:T:C	rs78250994	T	C	T	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr4	155591175	155591176	chr4:155591176:A:G	rs76396658	A	G	A	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr4	155591431	155591432	chr4:155591432:T:G	chr4:155591432:T:G	T	G	T	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr4	155592961	155592962	chr4:155592962:G:A	rs74402603	G	A	G	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr4	155648048	155648049	chr4:155648049:G:A	rs2062175	G	A	G	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr4	155664379	155664380	chr4:155664380:A:G	rs34366064	A	G	A	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr4	155666433	155666434	chr4:155666434:C:T	rs73858149	C	T	C	Hoxd9.mouse_homeodomain_1	1	1	+	7.889898683853121	6.575096769520114	ACCATAAAA
chr4	155666445	155666446	chr4:155666446:A:C	rs3806780	A	C	A	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr4	155675852	155675853	chr4:155675853:G:C	rs2170648	G	C	G	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr4	155982691	155982692	chr4:155982692:T:A	rs12507353	T	A	T	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr4	156261477	156261478	chr4:156261478:T:C	rs13131866	T	C	T	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr4	156272386	156272387	chr4:156272387:A:C	rs6845000	A	C	C	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr4	156391544	156391545	chr4:156391545:G:A	rs6852787	G	A	G	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr4	156399211	156399212	chr4:156399212:C:A	rs112630523	C	A	C	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr4	156497117	156497118	chr4:156497118:A:G	rs79232839	A	G	A	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr4	156537153	156537154	chr4:156537154:T:C	rs952244	T	C	T	Hoxd9.mouse_homeodomain_1	6	1	-	8.027213970992095	1.3233880244003648	CACATAAAA
chr4	156583882	156583883	chr4:156583883:A:C	rs13133179	A	C	A	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr4	156660372	156660373	chr4:156660373:T:C	rs77114940	T	C	T	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr4	156673259	156673260	chr4:156673260:T:G	chr4:156673260:T:G	T	G	T	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr4	156705487	156705488	chr4:156705488:C:T	rs9307949	C	T	C	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr4	156751144	156751145	chr4:156751145:C:A	chr4:156751145:C:A	C	A	C	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr4	157004985	157004986	chr4:157004986:T:C	rs72978405	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.027213970992095	6.693135371129603	CACATAAAA
chr4	157114936	157114937	chr4:157114937:G:A	rs11100095	G	A	G	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr4	157128587	157128588	chr4:157128588:C:T	rs114861734	C	T	C	Hoxd9.mouse_homeodomain_1	8	1	-	7.522691831404475	8.98901893988973	CCCATAAAG
chr4	157172168	157172169	chr4:157172169:G:T	rs72685586	G	T	G	Hoxd9.mouse_homeodomain_1	2	1	-	8.409487817756228	7.707931958869418	CCCATTAAA
chr4	157502946	157502947	chr4:157502947:T:A	rs10011455	T	A	T	Hoxd9.mouse_homeodomain_1	7	1	-	8.027213970992095	6.2801301561512854	CACATAAAA
chr4	158042822	158042823	chr4:158042823:C:T	rs192594304	C	T	C	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr4	158080044	158080045	chr4:158080045:T:C	rs4513617	T	C	C	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr4	158302341	158302342	chr4:158302342:C:A	rs534249831	C	A	C	Hoxd9.mouse_homeodomain_1	0	1	-	8.678783717710262	7.094471634580788	GCCATAAAA
chr4	158523161	158523162	chr4:158523162:T:C	rs936094	T	C	T	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr4	158953239	158953240	chr4:158953240:T:C	rs2195035	T	C	C	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr4	159006966	159006967	chr4:159006967:T:C	rs999410	T	C	T	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr4	159095387	159095388	chr4:159095388:G:C	rs75415318	G	C	G	Hoxd9.mouse_homeodomain_1	0	1	-	8.287463081002919	7.9772278588234515	CCAATAAAA
chr4	159171369	159171370	chr4:159171370:T:C	rs75007992	T	C	T	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr4	159228103	159228104	chr4:159228104:T:G	chr4:159228104:T:G	T	G	T	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr4	159229330	159229331	chr4:159229331:G:A	rs7686769	G	A	G	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr4	159292470	159292471	chr4:159292471:A:T	rs6536407	A	T	T	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr4	159305529	159305530	chr4:159305530:A:T	rs6536409	A	T	T	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr4	159444808	159444809	chr4:159444809:A:G	rs3856995	A	G	A	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr4	159516365	159516366	chr4:159516366:G:C	rs6536434	G	C	G	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr4	160083064	160083065	chr4:160083065:T:C	rs10016537	T	C	C	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr4	160083066	160083067	chr4:160083067:G:T	rs10004735	G	T	G	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr4	160239000	160239001	chr4:160239001:T:C	rs35514758	T	C	C	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr4	160251726	160251727	chr4:160251727:C:A	chr4:160251727:C:A	C	A	C	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr4	160251743	160251744	chr4:160251744:C:A	rs11932347	C	A	C	Hoxd9.mouse_homeodomain_1	2	1	+	8.027213970992095	7.325658112105286	CACATAAAA
chr4	160251760	160251761	chr4:160251761:A:G	rs147104532	A	G	A	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr4	160362717	160362718	chr4:160362718:G:C	rs294509	G	C	G	Hoxd9.mouse_homeodomain_1	0	1	-	7.091711387329735	6.781476165150267	CCCATCAAA
chr4	160451396	160451397	chr4:160451397:G:A	rs1371256	G	A	G	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr4	160451400	160451401	chr4:160451401:C:A	rs1371257	C	A	C	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr4	160587353	160587354	chr4:160587354:C:T	rs6849184	C	T	c	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr4	160795417	160795418	chr4:160795418:T:C	rs75129667	T	C	T	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr4	160877542	160877543	chr4:160877543:G:A	rs7654637	G	A	A	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr4	160887585	160887586	chr4:160887586:T:G	rs7663574	T	G	G	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr4	161082260	161082261	chr4:161082261:A:G	rs7693938	A	G	G	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr4	161566164	161566165	chr4:161566165:C:T	rs7688213	C	T	C	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr4	161604677	161604678	chr4:161604678:T:C	rs144962749	T	C	T	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr4	161656661	161656662	chr4:161656662:A:G	rs78749316	A	G	A	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr4	161714400	161714401	chr4:161714401:C:G	rs7693232	C	G	C	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr4	162058756	162058757	chr4:162058757:T:A	rs77487691	T	A	T	Hoxd9.mouse_homeodomain_1	5	1	-	7.889898683853121	7.3103675617196195	ACCATAAAA
chr4	162078240	162078241	chr4:162078241:C:T	rs999926963	C	T	C	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr4	162090510	162090511	chr4:162090511:G:A	rs10005652	G	A	G	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr4	162129238	162129239	chr4:162129239:T:G	rs75498149	T	G	T	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr4	162129240	162129241	chr4:162129241:C:A	rs72986905	C	A	C	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr4	162269217	162269218	chr4:162269218:C:T	rs10015093	C	T	C	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr4	162349657	162349658	chr4:162349658:A:G	rs17539633	A	G	A	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr4	162463542	162463543	chr4:162463543:A:G	rs17600762	A	G	A	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr4	162497779	162497780	chr4:162497780:A:C	rs72986558	A	C	A	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr4	163033010	163033011	chr4:163033011:T:C	rs141247317	T	C	T	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr4	163201097	163201098	chr4:163201098:A:G	rs72697025	A	G	A	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr4	163367808	163367809	chr4:163367809:T:C	rs35943558	T	C	T	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr4	164396579	164396580	chr4:164396580:G:A	rs6835711	G	A	A	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr4	164509123	164509124	chr4:164509124:G:A	rs4079692	G	A	A	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr4	164731781	164731782	chr4:164731782:T:C	rs6851070	T	C	T	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr4	164770473	164770474	chr4:164770474:G:A	rs114533578	G	A	G	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr4	164932104	164932105	chr4:164932105:G:A	rs10030484	G	A	N	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr4	164949799	164949800	chr4:164949800:C:G	rs4234889	C	G	c	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr4	165089662	165089663	chr4:165089663:G:A	rs12498760	G	A	G	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr4	165343905	165343906	chr4:165343906:C:G	rs72701632	C	G	C	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr4	165553693	165553694	chr4:165553694:A:G	rs114179087	A	G	A	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr4	165553717	165553718	chr4:165553718:A:G	rs6536920	A	G	A	Hoxd9.mouse_homeodomain_1	4	1	-	7.716978748812629	5.061932103950051	GACATAAAA
chr4	165558326	165558327	chr4:165558327:C:T	rs10005378	C	T	T	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr4	166065041	166065042	chr4:166065042:G:A	rs6536942	G	A	A	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr4	166156459	166156460	chr4:166156460:A:C	rs11939812	A	C	A	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr4	166357461	166357462	chr4:166357462:G:C	rs79814767	G	C	G	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr4	166831919	166831920	chr4:166831920:G:A	rs6845116	G	A	G	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr4	167456174	167456175	chr4:167456175:T:C	rs12649155	T	C	t	Hoxd9.mouse_homeodomain_1	5	1	-	7.9772278588234515	1.603038140576896	GCAATAAAA
chr4	167587021	167587022	chr4:167587022:A:G	rs17704359	A	G	A	Hoxd9.mouse_homeodomain_1	6	1	+	7.889898683853121	1.18607273726139	ACCATAAAA
chr4	167615118	167615119	chr4:167615119:C:T	rs4579149	C	T	C	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr4	167699714	167699715	chr4:167699715:T:A	rs13152034	T	A	T	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr4	167785577	167785578	chr4:167785578:C:T	rs28663044	C	T	C	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr4	168021790	168021791	chr4:168021791:A:C	rs35270405	A	C	C	Hoxd9.mouse_homeodomain_1	8	1	+	7.9772278588234515	6.444660233481052	GCAATAAAA
chr4	168027452	168027453	chr4:168027453:T:A	rs66647539	T	A	A	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr4	168317649	168317650	chr4:168317650:T:A	rs111864446	T	A	T	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr4	168408778	168408779	chr4:168408779:G:A	rs17612290	G	A	G	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr4	168478671	168478672	chr4:168478672:C:A	rs10002308	C	A	a	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr4	168570218	168570219	chr4:168570219:T:C	rs10004025	T	C	T	Hoxd9.mouse_homeodomain_1	8	1	-	7.075409217893736	5.60908210940848	CCCGTTAAA
chr4	168605751	168605752	chr4:168605752:T:C	rs4371580	T	C	C	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr4	168724886	168724887	chr4:168724887:C:A	rs1018632808	C	A	C	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr4	168756461	168756462	chr4:168756462:C:T	rs12646759	C	T	T	Hoxd9.mouse_homeodomain_1	1	1	+	7.9772278588234515	6.662425944490444	GCAATAAAA
chr4	168994437	168994438	chr4:168994438:G:T	rs1973111	G	T	T	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr4	169074130	169074131	chr4:169074131:A:T	rs11132795	A	T	A	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr4	169095207	169095208	chr4:169095208:T:A	rs146403033	T	A	T	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr4	169160818	169160819	chr4:169160819:G:A	rs13142867	G	A	G	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr4	169315811	169315812	chr4:169315812:C:T	rs4692712	C	T	C	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr4	169437869	169437870	chr4:169437870:G:A	rs6553438	G	A	A	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr4	169625357	169625358	chr4:169625358:A:G	rs7681537	A	G	A	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr4	169922953	169922954	chr4:169922954:T:C	rs77365998	T	C	C	Hoxd9.mouse_homeodomain_1	3	1	-	7.212456609225008	5.878378009362515	GCCATAAAG
chr4	169947211	169947212	chr4:169947212:T:C	rs13132348	T	C	C	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr4	169976933	169976934	chr4:169976934:A:G	rs183009685	A	G	A	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr4	171234334	171234335	chr4:171234335:A:G	rs4692874	A	G	G	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr4	171629810	171629811	chr4:171629811:T:C	rs113751652	T	C	T	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr4	172033124	172033125	chr4:172033125:C:G	rs79858841	C	G	C	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr4	172033909	172033910	chr4:172033910:A:T	rs12647912	A	T	A	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr4	172410759	172410760	chr4:172410760:A:G	chr4:172410760:A:G	A	G	A	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr4	172979158	172979159	chr4:172979159:G:A	rs9997573	G	A	G	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr4	173045962	173045963	chr4:173045963:T:C	rs13149987	T	C	T	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr4	173111571	173111572	chr4:173111572:T:A	rs61043356	T	A	T	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr4	173186071	173186072	chr4:173186072:T:G	rs1206276178	T	G	T	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr4	173276730	173276731	chr4:173276731:C:T	rs78093013	C	T	C	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr4	173622197	173622198	chr4:173622198:G:A	rs113769219	G	A	G	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr4	173735654	173735655	chr4:173735655:C:T	rs55973662	C	T	C	Hoxd9.mouse_homeodomain_1	3	1	-	7.34470511784777	8.678783717710262	GCCGTAAAA
chr4	173881831	173881832	chr4:173881832:T:C	rs11938297	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.1462160923678635	5.81213749250537	GCCATAAAC
chr4	173899037	173899038	chr4:173899038:A:T	rs11735803	A	T	A	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr4	174084864	174084865	chr4:174084865:G:T	rs877019	G	T	T	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr4	174127790	174127791	chr4:174127791:C:G	rs78984645	C	G	C	Hoxd9.mouse_homeodomain_1	1	1	+	7.091711387329735	0.6821781585473693	CCCATCAAA
chr4	174155324	174155325	chr4:174155325:T:C	rs728160	T	C	T	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr4	174319397	174319398	chr4:174319398:G:C	rs1323957871	G	C	G	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr4	174614240	174614241	chr4:174614241:G:A	rs4315752	G	A	G	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr4	174614256	174614257	chr4:174614257:T:C	rs12505186	T	C	T	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr4	174682141	174682142	chr4:174682142:G:A	rs72706156	G	A	G	Hoxd9.mouse_homeodomain_1	1	1	-	8.099252595576761	6.784450681243753	GCCATTAAA
chr4	175824139	175824140	chr4:175824140:T:C	rs7673185	T	C	t	Hoxd9.mouse_homeodomain_1	7	1	-	8.287463081002919	1.5836371344111884	CCAATAAAA
chr4	176052844	176052845	chr4:176052845:C:T	rs77552758	C	T	C	Hoxd9.mouse_homeodomain_1	1	1	+	8.678783717710262	7.363981803377255	GCCATAAAA
chr4	176053871	176053872	chr4:176053872:T:C	rs68134022	T	C	t	Hoxd9.mouse_homeodomain_1	0	1	-	7.889898683853121	8.678783717710262	ACCATAAAA
chr4	176220967	176220968	chr4:176220968:C:T	rs55654083	C	T	c	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr4	176239110	176239111	chr4:176239111:A:G	rs7688636	A	G	A	Hoxd9.mouse_homeodomain_1	4	1	-	7.241935125048919	4.5868884801863405	CCCATACAA
chr4	176239113	176239114	chr4:176239114:G:T	rs112210348	G	T	G	Hoxd9.mouse_homeodomain_1	1	1	-	7.241935125048919	6.2801301561512854	CCCATACAA
chr4	176277683	176277684	chr4:176277684:A:G	rs6836989	A	G	A	Hoxd9.mouse_homeodomain_1	4	1	-	7.889898683853121	5.234852038990543	ACCATAAAA
chr4	176308567	176308568	chr4:176308568:A:C	rs11133144	A	C	A	Hoxd9.mouse_homeodomain_1	7	1	+	7.889898683853121	5.000482913822536	ACCATAAAA
chr4	176315651	176315652	chr4:176315652:A:G	rs9995744	A	G	G	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr4	176339909	176339910	chr4:176339910:T:G	rs6855882	T	G	G	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr4	176451601	176451602	chr4:176451602:G:A	rs2167096	G	A	G	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr4	176635041	176635042	chr4:176635042:A:G	rs111262153	A	G	A	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr4	176735433	176735434	chr4:176735434:C:A	rs193037952	C	A	C	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr4	176815695	176815696	chr4:176815696:C:T	rs13104461	C	T	C	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr4	176906962	176906963	chr4:176906963:T:C	rs2574911	T	C	C	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr4	176979508	176979509	chr4:176979509:G:T	rs72698759	G	T	G	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr4	176979509	176979510	chr4:176979510:C:A	rs72698760	C	A	C	Hoxd9.mouse_homeodomain_1	0	1	+	8.027213970992095	6.928093714955487	CACATAAAA
chr4	177189934	177189935	chr4:177189935:A:G	rs10006472	A	G	A	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr4	177189948	177189949	chr4:177189949:C:G	rs10028817	C	G	G	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr4	177580761	177580762	chr4:177580762:T:C	rs12509926	T	C	T	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr4	177810080	177810081	chr4:177810081:T:C	rs574265906	T	C	T	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr4	178654782	178654783	chr4:178654783:T:C	rs77648112	T	C	T	Hoxd9.mouse_homeodomain_1	7	1	-	7.241935125048919	0.5381091784571871	CCCATACAA
chr4	178767661	178767662	chr4:178767662:A:T	rs62334153	A	T	A	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr4	179111142	179111143	chr4:179111143:T:C	rs114959444	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.409487817756228	7.075409217893736	CCCATTAAA
chr4	179262371	179262372	chr4:179262372:T:C	rs1379400	T	C	T	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr4	179346715	179346716	chr4:179346716:T:G	rs55805360	T	G	t	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr4	179416034	179416035	chr4:179416035:A:C	rs10031494	A	C	A	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr4	179720206	179720207	chr4:179720207:T:C	rs7681954	T	C	C	Hoxd9.mouse_homeodomain_1	3	1	-	8.409487817756228	7.075409217893736	CCCATTAAA
chr4	179803955	179803956	chr4:179803956:A:G	rs565607863	A	G	A	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr4	179836416	179836417	chr4:179836417:G:C	rs13105021	G	C	.	Hoxd9.mouse_homeodomain_1	1	1	-	7.241935125048919	0.8324018962665533	CCCATACAA
chr4	180028729	180028730	chr4:180028730:A:G	rs11728361	A	G	A	Hoxd9.mouse_homeodomain_1	4	1	-	7.716978748812629	5.061932103950051	GACATAAAA
chr4	180146350	180146351	chr4:180146351:C:T	rs13132234	C	T	C	Hoxd9.mouse_homeodomain_1	2	1	+	8.027213970992095	1.5397735133684596	CACATAAAA
chr4	180280952	180280953	chr4:180280953:T:G	rs12507453	T	G	T	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr4	180794547	180794548	chr4:180794548:C:T	rs75575794	C	T	C	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr4	180861538	180861539	chr4:180861539:A:G	rs6832395	A	G	A	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr4	181140385	181140386	chr4:181140386:T:G	rs982982995	T	G	T	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr4	181140918	181140919	chr4:181140919:G:A	rs17230226	G	A	G	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr4	181259657	181259658	chr4:181259658:G:A	rs76240492	G	A	G	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr4	181281345	181281346	chr4:181281346:T:C	rs6831337	T	C	T	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr4	181428233	181428234	chr4:181428234:T:A	rs2871238	T	A	T	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr4	181528579	181528580	chr4:181528580:G:A	rs77524296	G	A	A	Hoxd9.mouse_homeodomain_1	1	1	-	7.522691831404475	6.207889917071467	CCCATAAAG
chr4	181676785	181676786	chr4:181676786:C:T	rs17072040	C	T	C	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr4	181685984	181685985	chr4:181685985:G:T	rs79975267	G	T	G	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr4	181734018	181734019	chr4:181734019:A:G	rs4069779	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	7.1462160923678635	5.81213749250537	GCCATAAAC
chr4	181947686	181947687	chr4:181947687:G:A	rs9993255	G	A	A	Hoxd9.mouse_homeodomain_1	2	1	-	7.091711387329735	0.6042709297060974	CCCATCAAA
chr4	182227961	182227962	chr4:182227962:G:C	rs79677410	G	C	C	Hoxd9.mouse_homeodomain_1	0	1	+	7.9772278588234515	8.287463081002919	GCAATAAAA
chr4	182245826	182245827	chr4:182245827:G:T	rs7656126	G	T	T	Hoxd9.mouse_homeodomain_1	0	1	+	7.9772278588234515	6.392915775693977	GCAATAAAA
chr4	182289786	182289787	chr4:182289787:A:G	rs73005412	A	G	A	Hoxd9.mouse_homeodomain_1	4	1	-	8.409487817756228	5.7544411728936495	CCCATTAAA
chr4	182584368	182584369	chr4:182584369:C:G	rs13107775	C	G	G	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr4	182919513	182919514	chr4:182919514:C:T	rs17074257	C	T	T	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr4	183018987	183018988	chr4:183018988:G:A	rs9312310	G	A	G	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr4	183115665	183115666	chr4:183115666:G:A	rs10013421	G	A	A	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr4	183155051	183155052	chr4:183155052:G:A	rs75818457	G	A	G	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr4	183377265	183377266	chr4:183377266:A:G	rs4602536	A	G	A	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr4	183423929	183423930	chr4:183423930:T:G	rs73010614	T	G	T	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr4	183532925	183532926	chr4:183532926:T:G	rs4440262	T	G	T	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr4	183532930	183532931	chr4:183532931:T:G	rs4518295	T	G	G	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr4	183564210	183564211	chr4:183564211:C:T	rs4526009	C	T	C	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr4	183564222	183564223	chr4:183564223:G:A	rs55927721	G	A	G	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr4	183715447	183715448	chr4:183715448:G:A	rs11735434	G	A	G	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr4	183751709	183751710	chr4:183751710:C:T	chr4:183751710:C:T	C	T	C	Hoxd9.mouse_homeodomain_1	1	1	+	8.678783717710262	7.363981803377255	GCCATAAAA
chr4	184062912	184062913	chr4:184062913:T:C	rs11938935	T	C	T	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr4	184142300	184142301	chr4:184142301:T:A	rs6815145	T	A	A	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr4	184188840	184188841	chr4:184188841:G:A	rs6552767	G	A	G	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr4	184216442	184216443	chr4:184216443:C:A	rs6819977	C	A	A	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr4	184253585	184253586	chr4:184253586:G:A	rs113758901	G	A	G	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr4	184262941	184262942	chr4:184262942:A:G	rs6857764	A	G	G	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr4	184268683	184268684	chr4:184268684:C:T	rs7671178	C	T	C	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr4	184320665	184320666	chr4:184320666:T:C	rs12651252	T	C	T	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr4	184451979	184451980	chr4:184451980:T:C	rs3775578	T	C	T	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr4	184460322	184460323	chr4:184460323:G:C	rs58924691	G	C	G	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr4	184625331	184625332	chr4:184625332:A:T	rs72689225	A	T	A	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr4	184705977	184705978	chr4:184705978:G:C	rs28620459	G	C	G	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr4	184732196	184732197	chr4:184732197:T:A	rs6552811	T	A	T	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr4	184744414	184744415	chr4:184744415:A:G	rs73028531	A	G	G	Hoxd9.mouse_homeodomain_1	4	1	-	7.1462160923678635	4.491169447505284	GCCATAAAC
chr4	185127311	185127312	chr4:185127312:T:A	rs4862512	T	A	A	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr4	185213049	185213050	chr4:185213050:A:G	rs2310159	A	G	A	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr4	185531676	185531677	chr4:185531677:T:A	rs11132316	T	A	T	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr4	185531704	185531705	chr4:185531705:G:A	rs181099774	G	A	G	Hoxd9.mouse_homeodomain_1	0	1	-	8.409487817756228	6.514940512447287	CCCATTAAA
chr4	185712180	185712181	chr4:185712181:A:C	rs7689859	A	C	C	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr4	185753101	185753102	chr4:185753102:T:C	rs1039233	T	C	C	Hoxd9.mouse_homeodomain_1	4	1	+	7.1462160923678635	4.491169447505284	GCCATAAAC
chr4	185816861	185816862	chr4:185816862:C:T	rs7673778	C	T	T	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr4	185835887	185835888	chr4:185835888:C:A	rs55730227	C	A	C	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr4	185912943	185912944	chr4:185912944:C:T	rs114519797	C	T	C	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr4	186202021	186202022	chr4:186202022:G:T	rs111412681	G	T	G	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr4	186297865	186297866	chr4:186297866:A:C	rs57266032	A	C	A	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr4	186422529	186422530	chr4:186422530:T:C	rs75293572	T	C	C	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr4	186641732	186641733	chr4:186641733:A:G	rs10007521	A	G	G	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr4	186780537	186780538	chr4:186780538:G:C	rs325032	G	C	C	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr4	186819872	186819873	chr4:186819873:G:T	rs28631684	G	T	G	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr4	186821856	186821857	chr4:186821857:A:C	rs34148509	A	C	C	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr4	186858386	186858387	chr4:186858387:G:A	rs167721	G	A	G	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr4	186902667	186902668	chr4:186902668:C:G	rs117765560	C	G	C	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr4	186912880	186912881	chr4:186912881:C:T	rs403300	C	T	C	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr4	186931718	186931719	chr4:186931719:C:A	rs150062473	C	A	C	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr4	186934416	186934417	chr4:186934417:G:A	rs533245352	G	A	G	Hoxd9.mouse_homeodomain_1	8	1	-	7.1462160923678635	5.746270592944195	GCCATAAAC
chr4	187027617	187027618	chr4:187027618:T:C	rs58499376	T	C	C	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr4	187084793	187084794	chr4:187084794:G:T	rs2029257	G	T	G	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr4	187101831	187101832	chr4:187101832:G:C	rs6553037	G	C	G	Hoxd9.mouse_homeodomain_1	1	1	-	7.889898683853121	1.480365455070757	ACCATAAAA
chr4	187236587	187236588	chr4:187236588:C:T	rs7695955	C	T	T	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr4	187236604	187236605	chr4:187236605:G:T	rs7696264	G	T	T	Hoxd9.mouse_homeodomain_1	2	1	-	7.45645131454733	6.75489545566052	CCCATAAAC
chr4	187374832	187374833	chr4:187374833:C:T	rs4862797	C	T	C	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr4	188012884	188012885	chr4:188012885:G:A	rs6841058	G	A	A	Hoxd9.mouse_homeodomain_1	2	1	-	7.889898683853121	1.4024582262294842	ACCATAAAA
chr4	188200007	188200008	chr4:188200008:C:A	rs6553166	C	A	A	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr4	188200024	188200025	chr4:188200025:C:G	rs67683155	C	G	C	Hoxd9.mouse_homeodomain_1	1	1	+	8.409487817756228	1.9999545889738628	CCCATTAAA
chr4	188217653	188217654	chr4:188217654:T:C	rs4324618	T	C	T	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr4	188450912	188450913	chr4:188450913:G:A	rs6850750	G	A	G	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr4	188826077	188826078	chr4:188826078:A:G	rs28446637	A	G	A	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr4	188958498	188958499	chr4:188958499:T:A	rs182913156	T	A	T	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr4	188989801	188989802	chr4:188989802:G:A	rs11132593	G	A	A	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr4	189086119	189086120	chr4:189086120:C:T	rs11737442	C	T	T	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr4	189200324	189200325	chr4:189200325:C:T	rs72709227	C	T	T	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr4	189371689	189371690	chr4:189371690:A:G	rs11943937	A	G	G	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr4	189611297	189611298	chr4:189611298:C:T	rs75606667	C	T	C	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr5	71844	71845	chr5:71845:C:T	rs148782997	C	T	C	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr5	246331	246332	chr5:246332:A:G	rs11956656	A	G	g	Hoxd9.mouse_homeodomain_1	3	1	+	7.212456609225008	5.878378009362515	GCCATAAAG
chr5	356054	356055	chr5:356055:G:C	rs11956085	G	C	G	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr5	402115	402116	chr5:402116:C:G	rs13436114	C	G	C	Hoxd9.mouse_homeodomain_1	0	1	+	8.409487817756228	8.099252595576761	CCCATTAAA
chr5	413953	413954	chr5:413954:G:A	rs11954173	G	A	G	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr5	413985	413986	chr5:413986:C:T	rs11746862	C	T	C	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr5	413987	413988	chr5:413988:G:C	rs2671896	G	C	G	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr5	684655	684656	chr5:684656:T:C	rs400873	T	C	-	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr5	692149	692150	chr5:692150:C:T	rs115175732	C	T	c	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr5	772038	772039	chr5:772039:A:G	rs3853740	A	G	N	Hoxd9.mouse_homeodomain_1	8	1	+	7.716978748812629	6.250651640327374	GACATAAAA
chr5	772040	772041	chr5:772041:G:A	rs369888286	G	A	g	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr5	776762	776763	chr5:776763:G:A	rs868673212	G	A	g	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr5	777694	777695	chr5:777695:T:A	rs12516738	T	A	t	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr5	932994	932995	chr5:932995:G:C	rs60356722	G	C	C	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr5	945438	945439	chr5:945439:A:G	rs113435183	A	G	a	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr5	991936	991937	chr5:991937:C:T	rs28548587	C	T	C	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr5	1021561	1021562	chr5:1021562:A:G	rs76118124	A	G	A	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr5	1021583	1021584	chr5:1021584:G:A	rs7380206	G	A	A	Hoxd9.mouse_homeodomain_1	3	1	+	7.654940340027237	8.98901893988973	CCCGTAAAA
chr5	1038645	1038646	chr5:1038646:G:A	rs374099714	G	A	G	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr5	1258290	1258291	chr5:1258291:T:C	chr5:1258291:T:C	T	C	T	Hoxd9.mouse_homeodomain_1	4	1	+	7.45645131454733	4.801404669684752	CCCATAAAC
chr5	1408863	1408864	chr5:1408864:A:C	rs11133770	A	C	A	Hoxd9.mouse_homeodomain_1	7	1	+	7.091711387329735	4.202295617299148	CCCATCAAA
chr5	1429071	1429072	chr5:1429072:G:C	rs427284	G	C	G	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr5	1471272	1471273	chr5:1471273:G:A	rs27055	G	A	A	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr5	1494323	1494324	chr5:1494324:C:T	rs40180	C	T	T	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr5	1718973	1718974	chr5:1718974:T:G	rs904727	T	G	G	Hoxd9.mouse_homeodomain_1	4	1	+	8.98901893988973	2.147200492559124	CCCATAAAA
chr5	1896148	1896149	chr5:1896149:C:G	rs13177232	C	G	g	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr5	2009763	2009764	chr5:2009764:C:T	rs4254943	C	T	C	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr5	2172824	2172825	chr5:2172825:C:T	rs143280992	C	T	C	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr5	2489517	2489518	chr5:2489518:G:A	rs3099584	G	A	A	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr5	2579021	2579022	chr5:2579022:C:T	rs446723	C	T	C	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr5	2658722	2658723	chr5:2658723:G:A	rs998048814	G	A	G	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr5	2679396	2679397	chr5:2679397:A:G	rs7704762	A	G	G	Hoxd9.mouse_homeodomain_1	3	1	+	8.099252595576761	6.765173995714267	GCCATTAAA
chr5	2741278	2741279	chr5:2741279:C:T	rs2962563	C	T	C	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr5	2781166	2781167	chr5:2781167:G:A	rs6891405	G	A	A	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr5	2913063	2913064	chr5:2913064:A:C	rs13170940	A	C	C	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr5	3010949	3010950	chr5:3010950:C:T	rs77085533	C	T	C	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr5	3091331	3091332	chr5:3091332:T:C	rs62333208	T	C	T	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr5	3091351	3091352	chr5:3091352:C:T	rs17543060	C	T	T	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr5	3253902	3253903	chr5:3253903:G:A	rs4302592	G	A	A	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr5	3327550	3327551	chr5:3327551:T:G	rs377330789	T	G	T	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr5	3601809	3601810	chr5:3601810:A:G	rs62333993	A	G	A	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr5	3734057	3734058	chr5:3734058:T:C	rs955077	T	C	C	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr5	4636210	4636211	chr5:4636211:T:G	rs293111	T	G	G	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr5	4641107	4641108	chr5:4641108:C:T	rs56746453	C	T	C	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr5	4663269	4663270	chr5:4663270:A:G	rs4701948	A	G	A	Hoxd9.mouse_homeodomain_1	4	1	-	7.212456609225008	4.557409964362429	GCCATAAAG
chr5	4930415	4930416	chr5:4930416:G:A	rs182069283	G	A	G	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr5	4941475	4941476	chr5:4941476:C:T	rs413620	C	T	T	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr5	5124406	5124407	chr5:5124407:G:A	rs270185	G	A	A	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr5	5156541	5156542	chr5:5156542:T:C	rs6899080	T	C	T	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr5	5279478	5279479	chr5:5279479:C:T	rs10512778	C	T	T	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr5	5381432	5381433	chr5:5381433:G:A	rs143379989	G	A	G	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr5	5460933	5460934	chr5:5460934:C:T	rs749167315	C	T	C	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr5	5613591	5613592	chr5:5613592:C:A	chr5:5613592:C:A	C	A	C	Hoxd9.mouse_homeodomain_1	0	1	+	7.241935125048919	6.1428148690123106	CCCATACAA
chr5	5882071	5882072	chr5:5882072:A:G	rs13362109	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.027213970992095	6.693135371129603	CACATAAAA
chr5	5953660	5953661	chr5:5953661:T:C	rs73736433	T	C	T	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr5	6147217	6147218	chr5:6147218:A:G	rs10052070	A	G	G	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr5	6215349	6215350	chr5:6215350:C:T	rs7727856	C	T	C	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr5	6567039	6567040	chr5:6567040:A:T	rs2617570	A	T	T	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr5	6567049	6567050	chr5:6567050:A:G	rs115257241	A	G	A	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr5	6575173	6575174	chr5:6575174:A:G	rs497404	A	G	G	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr5	6575205	6575206	chr5:6575206:C:G	rs111786908	C	G	C	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr5	6745761	6745762	chr5:6745762:A:G	rs427394	A	G	A	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr5	6777373	6777374	chr5:6777374:A:G	rs138705522	A	G	A	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr5	6801432	6801433	chr5:6801433:T:C	rs2453355	T	C	t	Hoxd9.mouse_homeodomain_1	3	1	-	7.212456609225008	5.878378009362515	GCCATAAAG
chr5	6822105	6822106	chr5:6822106:T:G	rs372788193	T	G	G	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr5	6822114	6822115	chr5:6822115:G:A	rs574542892	G	A	G	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr5	6837649	6837650	chr5:6837650:T:C	rs34193916	T	C	T	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr5	7189811	7189812	chr5:7189812:C:A	rs9313179	C	A	A	Hoxd9.mouse_homeodomain_1	6	1	+	7.241935125048919	8.98901893988973	CCCATACAA
chr5	7216538	7216539	chr5:7216539:A:T	rs4702443	A	T	A	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr5	7249582	7249583	chr5:7249583:T:C	rs12518468	T	C	T	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr5	7261439	7261440	chr5:7261440:A:G	rs10045165	A	G	G	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr5	7271908	7271909	chr5:7271909:A:G	rs62341785	A	G	A	Hoxd9.mouse_homeodomain_1	8	1	+	8.98901893988973	7.522691831404475	CCCATAAAA
chr5	7541003	7541004	chr5:7541004:A:G	rs980485	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	7.241935125048919	5.907856525186427	CCCATACAA
chr5	7541015	7541016	chr5:7541016:G:A	rs980484	G	A	G	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr5	7928044	7928045	chr5:7928045:G:A	rs16879452	G	A	A	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr5	8048572	8048573	chr5:8048573:A:T	rs905514	A	T	A	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr5	8429659	8429660	chr5:8429660:C:T	rs7717779	C	T	C	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr5	8429671	8429672	chr5:8429672:A:G	rs76604368	A	G	A	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr5	9082323	9082324	chr5:9082324:G:A	rs16881943	G	A	G	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr5	9112481	9112482	chr5:9112482:G:A	rs73045620	G	A	G	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr5	9161123	9161124	chr5:9161124:G:C	rs3797915	G	C	G	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr5	9188528	9188529	chr5:9188529:A:T	rs12515855	A	T	A	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr5	9194992	9194993	chr5:9194993:C:T	rs40689	C	T	T	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr5	9195013	9195014	chr5:9195014:A:T	rs141658654	A	T	A	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr5	9210364	9210365	chr5:9210365:A:G	rs1806054	A	G	A	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr5	9210391	9210392	chr5:9210392:G:A	rs1479652	G	A	G	Hoxd9.mouse_homeodomain_1	8	1	+	7.522691831404475	8.98901893988973	CCCATAAAG
chr5	9210398	9210399	chr5:9210399:A:G	rs575723164	A	G	A	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr5	9348308	9348309	chr5:9348309:C:A	rs17196593	C	A	C	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr5	9353892	9353893	chr5:9353893:C:A	rs765046	C	A	C	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr5	9356811	9356812	chr5:9356812:C:G	rs1024488	C	G	C	Hoxd9.mouse_homeodomain_1	5	1	+	7.091711387329735	2.6148292216431743	CCCATCAAA
chr5	9496880	9496881	chr5:9496881:A:G	rs268494	A	G	G	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr5	9555814	9555815	chr5:9555815:T:G	rs10061459	T	G	G	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr5	9618360	9618361	chr5:9618361:G:A	rs41458	G	A	G	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr5	9655133	9655134	chr5:9655134:T:G	rs112248175	T	G	G	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr5	9839362	9839363	chr5:9839363:C:A	rs535083496	C	A	C	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr5	9869579	9869580	chr5:9869580:A:G	rs6898293	A	G	A	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr5	10019752	10019753	chr5:10019753:T:C	rs906073	T	C	T	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr5	10097691	10097692	chr5:10097692:A:G	rs35401555	A	G	A	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr5	10220272	10220273	chr5:10220273:T:C	rs66845069	T	C	T	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr5	10283209	10283210	chr5:10283210:T:G	rs6892453	T	G	G	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr5	10289390	10289391	chr5:10289391:C:T	rs13168213	C	T	T	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr5	10289528	10289529	chr5:10289529:G:A	rs74370358	G	A	G	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr5	10524390	10524391	chr5:10524391:A:G	rs2895545	A	G	A	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr5	10672670	10672671	chr5:10672671:T:G	rs78166037	T	G	T	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr5	10680884	10680885	chr5:10680885:G:A	rs5745297	G	A	G	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr5	10690466	10690467	chr5:10690467:A:C	rs4701878	A	C	A	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr5	10734080	10734081	chr5:10734081:C:T	rs16885262	C	T	C	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr5	10759205	10759206	chr5:10759206:T:A	rs62336805	T	A	A	Hoxd9.mouse_homeodomain_1	6	1	-	7.522691831404475	4.633276061373889	CCCATAAAG
chr5	10837235	10837236	chr5:10837236:T:G	rs191212302	T	G	T	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr5	11011093	11011094	chr5:11011094:T:C	rs852619	T	C	T	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr5	11090926	11090927	chr5:11090927:T:C	rs6887277	T	C	T	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr5	11596069	11596070	chr5:11596070:A:G	rs3852169	A	G	A	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr5	12547786	12547787	chr5:12547787:C:T	rs32346	C	T	T	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr5	13188081	13188082	chr5:13188082:T:C	rs17164390	T	C	T	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr5	13202885	13202886	chr5:13202886:G:C	rs10041255	G	C	C	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr5	13252479	13252480	chr5:13252480:A:T	rs34482579	A	T	A	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr5	13699004	13699005	chr5:13699005:C:A	rs10055055	C	A	C	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr5	13740866	13740867	chr5:13740867:C:T	rs6554809	C	T	T	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr5	14035558	14035559	chr5:14035559:T:C	rs138589052	T	C	T	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr5	14037673	14037674	chr5:14037674:T:C	rs79027506	T	C	T	Hoxd9.mouse_homeodomain_1	8	1	-	8.099252595576761	6.632925487091506	GCCATTAAA
chr5	14098275	14098276	chr5:14098276:C:T	rs75280766	C	T	C	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr5	14187659	14187660	chr5:14187660:C:A	rs26059	C	A	A	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr5	14255015	14255016	chr5:14255016:T:G	rs80001484	T	G	T	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr5	14272826	14272827	chr5:14272827:A:C	rs30618	A	C	A	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr5	14490543	14490544	chr5:14490544:T:A	rs116519882	T	A	T	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr5	14490553	14490554	chr5:14490554:T:C	rs142061060	T	C	T	Hoxd9.mouse_homeodomain_1	4	1	+	7.9772278588234515	5.3221812139608735	GCAATAAAA
chr5	14490569	14490570	chr5:14490570:C:G	rs116068526	C	G	C	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr5	14550995	14550996	chr5:14550996:A:G	rs112900742	A	G	A	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr5	14551002	14551003	chr5:14551003:A:G	rs26214	A	G	G	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr5	14763119	14763120	chr5:14763120:G:A	rs10475028	G	A	A	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr5	14768696	14768697	chr5:14768697:G:A	rs10039427	G	A	G	Hoxd9.mouse_homeodomain_1	0	1	-	8.287463081002919	6.392915775693977	CCAATAAAA
chr5	14980674	14980675	chr5:14980675:C:T	rs12521797	C	T	C	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr5	15009477	15009478	chr5:15009478:G:A	rs79612467	G	A	G	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr5	15009498	15009499	chr5:15009499:C:T	rs577143378	C	T	C	Hoxd9.mouse_homeodomain_1	2	1	+	8.027213970992095	1.5397735133684596	CACATAAAA
chr5	15240608	15240609	chr5:15240609:T:C	rs9654450	T	C	C	Hoxd9.mouse_homeodomain_1	7	1	-	7.522691831404475	0.8188658848127437	CCCATAAAG
chr5	15286434	15286435	chr5:15286435:T:A	rs57296905	T	A	T	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr5	15511112	15511113	chr5:15511113:T:C	rs73751955	T	C	C	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr5	15643029	15643030	chr5:15643030:G:A	rs62347915	G	A	G	Hoxd9.mouse_homeodomain_1	2	1	-	8.027213970992095	1.5397735133684596	CACATAAAA
chr5	16000164	16000165	chr5:16000165:A:G	rs144178563	A	G	A	Hoxd9.mouse_homeodomain_1	5	1	+	8.027213970992095	1.6530242527455408	CACATAAAA
chr5	16000177	16000178	chr5:16000178:C:G	rs62349962	C	G	C	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr5	16353557	16353558	chr5:16353558:G:A	rs114748908	G	A	G	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr5	16539246	16539247	chr5:16539247:T:C	rs530584746	T	C	T	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr5	16625335	16625336	chr5:16625336:T:C	rs572319002	T	C	T	Hoxd9.mouse_homeodomain_1	4	1	+	8.678783717710262	6.023737072847684	GCCATAAAA
chr5	16726895	16726896	chr5:16726896:C:A	rs529214466	C	A	C	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr5	16805738	16805739	chr5:16805739:T:C	rs80257095	T	C	T	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr5	16889777	16889778	chr5:16889778:G:C	rs2562341	G	C	G	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr5	16889805	16889806	chr5:16889806:G:A	rs61420593	G	A	G	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr5	16895103	16895104	chr5:16895104:T:G	rs530257848	T	G	T	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr5	16918194	16918195	chr5:16918195:T:C	rs71609339	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.409487817756228	7.075409217893736	CCCATTAAA
chr5	16932584	16932585	chr5:16932585:C:T	rs62371044	C	T	C	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr5	16932627	16932628	chr5:16932628:A:G	rs116438278	A	G	A	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr5	16964988	16964989	chr5:16964989:C:T	rs7734779	C	T	C	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr5	16964994	16964995	chr5:16964995:T:C	rs16869292	T	C	T	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr5	17107355	17107356	chr5:17107356:C:A	rs644358	C	A	A	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr5	17115033	17115034	chr5:17115034:T:C	rs142190488	T	C	T	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr5	17255405	17255406	chr5:17255406:T:C	rs2962365	T	C	C	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr5	17282478	17282479	chr5:17282479:T:C	rs561789987	T	C	T	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr5	17326118	17326119	chr5:17326119:C:G	rs1374131598	C	G	C	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr5	17329842	17329843	chr5:17329843:G:T	rs183985825	G	T	G	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr5	17721736	17721737	chr5:17721737:A:G	rs57506216	A	G	A	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr5	17878574	17878575	chr5:17878575:T:C	rs4095551	T	C	T	Hoxd9.mouse_homeodomain_1	2	1	-	8.287463081002919	5.5210272824374	CCAATAAAA
chr5	18027700	18027701	chr5:18027701:T:G	rs17711378	T	G	T	Hoxd9.mouse_homeodomain_1	7	1	-	8.099252595576761	5.209836825546175	GCCATTAAA
chr5	18150256	18150257	chr5:18150257:A:G	rs6862651	A	G	G	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr5	18557363	18557364	chr5:18557364:T:A	rs6452380	T	A	T	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr5	18749988	18749989	chr5:18749989:A:G	rs2962213	A	G	A	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr5	19243406	19243407	chr5:19243407:C:A	rs12518540	C	A	C	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr5	19243437	19243438	chr5:19243438:T:C	rs6884800	T	C	C	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr5	19258908	19258909	chr5:19258909:G:A	rs74632738	G	A	G	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr5	19406949	19406950	chr5:19406950:T:C	rs975840	T	C	t	Hoxd9.mouse_homeodomain_1	5	1	-	7.716978748812629	1.3427890305660735	GACATAAAA
chr5	19406966	19406967	chr5:19406967:A:T	rs2966993	A	T	a	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr5	19450364	19450365	chr5:19450365:A:G	rs17281015	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.027213970992095	6.693135371129603	CACATAAAA
chr5	19548047	19548048	chr5:19548048:C:A	rs347736	C	A	A	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr5	19566900	19566901	chr5:19566901:T:C	rs62349516	T	C	T	Hoxd9.mouse_homeodomain_1	4	1	+	8.678783717710262	6.023737072847684	GCCATAAAA
chr5	19859294	19859295	chr5:19859295:C:G	rs62352167	C	G	C	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr5	20245706	20245707	chr5:20245707:A:G	rs375813804	A	G	A	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr5	20445948	20445949	chr5:20445949:T:C	rs6887953	T	C	T	Hoxd9.mouse_homeodomain_1	5	1	-	8.98901893988973	2.6148292216431743	CCCATAAAA
chr5	21126541	21126542	chr5:21126542:C:T	rs1910008	C	T	T	Hoxd9.mouse_homeodomain_1	1	1	+	8.287463081002919	6.972661166669912	CCAATAAAA
chr5	21160461	21160462	chr5:21160462:C:T	rs371821	C	T	C	Hoxd9.mouse_homeodomain_1	2	1	+	7.241935125048919	0.7544946674252814	CCCATACAA
chr5	21931595	21931596	chr5:21931596:C:A	rs6452037	C	A	.	Hoxd9.mouse_homeodomain_1	2	1	+	8.027213970992095	7.325658112105286	CACATAAAA
chr5	21999582	21999583	chr5:21999583:G:A	rs10056037	G	A	G	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr5	22599514	22599515	chr5:22599515:G:A	rs269882	G	A	A	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr5	22662519	22662520	chr5:22662520:G:T	rs17356745	G	T	G	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr5	22899994	22899995	chr5:22899995:C:T	rs4701306	C	T	c	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr5	23026740	23026741	chr5:23026741:G:A	rs73059949	G	A	G	Hoxd9.mouse_homeodomain_1	1	1	-	7.522691831404475	6.207889917071467	CCCATAAAG
chr5	23389725	23389726	chr5:23389726:G:A	rs4264915	G	A	G	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr5	23931066	23931067	chr5:23931067:T:G	rs2055522	T	G	t	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr5	24444531	24444532	chr5:24444532:C:T	rs143259171	C	T	C	Hoxd9.mouse_homeodomain_1	8	1	-	7.212456609225008	8.678783717710262	GCCATAAAG
chr5	24643876	24643877	chr5:24643877:A:C	rs332008	A	C	C	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr5	24954840	24954841	chr5:24954841:T:A	rs1353957	T	A	A	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr5	25574860	25574861	chr5:25574861:G:A	rs75269565	G	A	G	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr5	25688284	25688285	chr5:25688285:T:A	rs248756	T	A	A	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr5	25892016	25892017	chr5:25892017:C:T	rs10069255	C	T	c	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr5	25892023	25892024	chr5:25892024:A:G	rs7729837	A	G	t	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr5	26139666	26139667	chr5:26139667:C:T	rs78972904	C	T	C	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr5	26295694	26295695	chr5:26295695:G:A	rs71611725	G	A	G	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr5	26493261	26493262	chr5:26493262:C:T	rs62343578	C	T	C	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr5	26553092	26553093	chr5:26553093:C:T	rs1428725	C	T	T	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr5	26601805	26601806	chr5:26601806:T:C	rs12109634	T	C	T	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr5	26833547	26833548	chr5:26833548:C:T	rs17495847	C	T	C	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr5	26918938	26918939	chr5:26918939:C:A	rs79547551	C	A	C	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr5	27376990	27376991	chr5:27376991:C:A	rs325343	C	A	c	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr5	27864624	27864625	chr5:27864625:C:T	rs72742847	C	T	T	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr5	27896657	27896658	chr5:27896658:A:G	rs1981978	A	G	A	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr5	27896681	27896682	chr5:27896682:A:G	rs1981979	A	G	A	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr5	27907063	27907064	chr5:27907064:A:G	rs2033234	A	G	G	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr5	27947404	27947405	chr5:27947405:T:C	rs16897223	T	C	C	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr5	28328980	28328981	chr5:28328981:G:C	rs11957078	G	C	G	Hoxd9.mouse_homeodomain_1	2	1	-	7.716978748812629	4.248987091360299	GACATAAAA
chr5	28678081	28678082	chr5:28678082:T:A	rs11956029	T	A	t	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr5	29277448	29277449	chr5:29277449:G:A	rs7718659	G	A	A	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr5	29277470	29277471	chr5:29277471:A:G	rs7718266	A	G	G	Hoxd9.mouse_homeodomain_1	3	1	+	8.099252595576761	6.765173995714267	GCCATTAAA
chr5	29462536	29462537	chr5:29462537:C:T	rs78265136	C	T	T	Hoxd9.mouse_homeodomain_1	1	1	+	8.678783717710262	7.363981803377255	GCCATAAAA
chr5	29793680	29793681	chr5:29793681:G:A	rs2061237	G	A	G	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr5	29803845	29803846	chr5:29803846:T:C	rs7711565	T	C	T	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr5	30607684	30607685	chr5:30607685:T:C	rs1436974	T	C	C	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr5	30932720	30932721	chr5:30932721:A:G	rs115378262	A	G	A	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr5	31021839	31021840	chr5:31021840:G:T	rs7737891	G	T	T	Hoxd9.mouse_homeodomain_1	2	1	-	7.716978748812629	7.0154228899258175	GACATAAAA
chr5	31027952	31027953	chr5:31027953:C:A	rs559922255	C	A	C	Hoxd9.mouse_homeodomain_1	1	1	+	8.678783717710262	7.716978748812629	GCCATAAAA
chr5	31060092	31060093	chr5:31060093:T:C	rs12153276	T	C	T	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr5	31380205	31380206	chr5:31380206:G:A	rs162863	G	A	G	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr5	31485808	31485809	chr5:31485809:G:C	rs185852648	G	C	G	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr5	31702175	31702176	chr5:31702176:G:A	rs12514249	G	A	A	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr5	31702185	31702186	chr5:31702186:T:A	rs141599796	T	A	T	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr5	31757943	31757944	chr5:31757944:T:C	rs529738	T	C	T	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr5	31887826	31887827	chr5:31887827:G:T	rs150985137	G	T	G	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr5	31890218	31890219	chr5:31890219:G:A	rs13157897	G	A	A	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr5	32057544	32057545	chr5:32057545:G:A	rs161545	G	A	A	Hoxd9.mouse_homeodomain_1	2	1	-	8.027213970992095	1.5397735133684596	CACATAAAA
chr5	32218421	32218422	chr5:32218422:T:A	rs79771592	T	A	T	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr5	32311175	32311176	chr5:32311176:A:G	rs2052562	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.409487817756228	7.075409217893736	CCCATTAAA
chr5	32467812	32467813	chr5:32467813:G:A	rs602162	G	A	G	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr5	32499982	32499983	chr5:32499983:C:G	rs2594825	C	G	C	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr5	32554605	32554606	chr5:32554606:T:G	rs56121682	T	G	G	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr5	32590403	32590404	chr5:32590404:C:T	rs150295712	C	T	C	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr5	32679496	32679497	chr5:32679497:A:C	rs2077312	A	C	A	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr5	32916871	32916872	chr5:32916872:A:C	rs16890493	A	C	C	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr5	33216662	33216663	chr5:33216663:A:G	rs10060855	A	G	A	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr5	33284809	33284810	chr5:33284810:T:C	rs1378259	T	C	T	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr5	33344864	33344865	chr5:33344865:A:G	rs732045	A	G	A	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr5	33362028	33362029	chr5:33362029:T:A	rs10472862	T	A	A	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr5	33441462	33441463	chr5:33441463:A:G	rs3849682	A	G	G	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr5	33442276	33442277	chr5:33442277:G:A	rs3777081	G	A	A	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr5	33475694	33475695	chr5:33475695:T:C	rs925210	T	C	T	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr5	33516296	33516297	chr5:33516297:A:T	rs3849684	A	T	T	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr5	33713455	33713456	chr5:33713456:C:T	rs10050510	C	T	C	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr5	33722084	33722085	chr5:33722085:G:A	rs75837826	G	A	A	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr5	33883694	33883695	chr5:33883695:G:C	rs72743306	G	C	G	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr5	34021600	34021601	chr5:34021601:C:T	rs840382	C	T	T	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr5	34416130	34416131	chr5:34416131:C:T	rs2119285	C	T	C	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr5	34486301	34486302	chr5:34486302:G:A	rs16902289	G	A	A	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr5	34486313	34486314	chr5:34486314:C:T	rs186325893	C	T	C	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr5	34486317	34486318	chr5:34486318:A:G	rs563831869	A	G	A	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr5	34497339	34497340	chr5:34497340:G:T	rs7711532	G	T	T	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr5	34509659	34509660	chr5:34509660:G:A	rs36036557	G	A	G	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr5	34535014	34535015	chr5:34535015:G:C	rs71615809	G	C	G	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr5	34535026	34535027	chr5:34535027:C:A	rs72728832	C	A	C	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr5	34535030	34535031	chr5:34535031:A:T	rs72728833	A	T	A	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr5	34625597	34625598	chr5:34625598:G:C	rs409376	G	C	G	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr5	34682890	34682891	chr5:34682891:G:C	rs16903658	G	C	G	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr5	34687805	34687806	chr5:34687806:G:A	rs2279604	G	A	A	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr5	34862254	34862255	chr5:34862255:T:A	rs10941221	T	A	A	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr5	35000689	35000690	chr5:35000690:C:T	rs7717823	C	T	c	Hoxd9.mouse_homeodomain_1	2	1	+	7.075409217893736	0.5879687602700975	CCCGTTAAA
chr5	35237683	35237684	chr5:35237684:A:G	rs6883649	A	G	A	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr5	35358450	35358451	chr5:35358451:A:T	rs17438617	A	T	A	Hoxd9.mouse_homeodomain_1	7	1	+	8.099252595576761	6.3521687807359495	GCCATTAAA
chr5	35385507	35385508	chr5:35385508:A:G	rs7734554	A	G	A	Hoxd9.mouse_homeodomain_1	7	1	+	7.091711387329735	0.38788544073800313	CCCATCAAA
chr5	36152639	36152640	chr5:36152640:A:G	rs33671	A	G	G	Hoxd9.mouse_homeodomain_1	3	1	+	8.027213970992095	6.693135371129603	CACATAAAA
chr5	36271525	36271526	chr5:36271526:T:C	rs2362981	T	C	T	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr5	36371619	36371620	chr5:36371620:G:A	rs7729385	G	A	A	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr5	36404275	36404276	chr5:36404276:C:T	rs75100267	C	T	C	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr5	36404284	36404285	chr5:36404285:C:T	rs556046110	C	T	C	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr5	36407764	36407765	chr5:36407765:C:T	rs6865918	C	T	T	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr5	36458173	36458174	chr5:36458174:C:G	rs6883721	C	G	C	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr5	36630837	36630838	chr5:36630838:G:A	rs1170148314	G	A	G	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr5	36641175	36641176	chr5:36641176:C:T	rs75027360	C	T	C	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr5	36670557	36670558	chr5:36670558:T:C	rs1423680	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.099252595576761	6.765173995714267	GCCATTAAA
chr5	36740236	36740237	chr5:36740237:T:G	rs36676	T	G	T	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr5	36802465	36802466	chr5:36802466:G:T	rs34139494	G	T	T	Hoxd9.mouse_homeodomain_1	2	1	-	8.678783717710262	7.9772278588234515	GCCATAAAA
chr5	36835825	36835826	chr5:36835826:T:C	rs13181860	T	C	C	Hoxd9.mouse_homeodomain_1	4	1	+	8.287463081002919	5.632416436140341	CCAATAAAA
chr5	36944825	36944826	chr5:36944826:T:C	chr5:36944826:T:C	T	C	T	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr5	36944846	36944847	chr5:36944847:G:T	rs571765949	G	T	G	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr5	37309787	37309788	chr5:37309788:C:T	rs112016357	C	T	C	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr5	37454734	37454735	chr5:37454735:C:T	rs73749038	C	T	C	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr5	38052115	38052116	chr5:38052116:C:T	rs57034263	C	T	T	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr5	38052116	38052117	chr5:38052117:A:G	rs58915619	A	G	G	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr5	38152441	38152442	chr5:38152442:C:T	rs13173044	C	T	T	Hoxd9.mouse_homeodomain_1	2	1	+	8.027213970992095	1.5397735133684596	CACATAAAA
chr5	38152442	38152443	chr5:38152443:A:G	rs10058338	A	G	G	Hoxd9.mouse_homeodomain_1	3	1	+	8.027213970992095	6.693135371129603	CACATAAAA
chr5	38380040	38380041	chr5:38380041:A:G	rs7712450	A	G	A	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr5	38381303	38381304	chr5:38381304:A:G	rs2589775	A	G	A	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr5	38435475	38435476	chr5:38435476:A:G	rs112409432	A	G	A	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr5	38516396	38516397	chr5:38516397:G:A	rs142087318	G	A	G	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr5	38681102	38681103	chr5:38681103:A:G	chr5:38681103:A:G	A	G	A	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr5	38743058	38743059	chr5:38743059:G:A	rs72746031	G	A	G	Hoxd9.mouse_homeodomain_1	2	1	-	7.45645131454733	0.9690108569236928	CCCATAAAC
chr5	38827755	38827756	chr5:38827756:G:A	chr5:38827756:G:A	G	A	G	Hoxd9.mouse_homeodomain_1	8	1	-	7.1462160923678635	5.746270592944195	GCCATAAAC
chr5	38827779	38827780	chr5:38827780:T:G	rs1487854832	T	G	T	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr5	39075154	39075155	chr5:39075155:C:G	rs184738408	C	G	C	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr5	39075183	39075184	chr5:39075184:T:G	rs77281362	T	G	T	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr5	39266546	39266547	chr5:39266547:C:G	rs266913	C	G	G	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr5	39355545	39355546	chr5:39355546:G:A	rs1421095	G	A	G	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr5	39468926	39468927	chr5:39468927:G:C	rs6451425	G	C	G	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr5	39494173	39494174	chr5:39494174:G:A	rs78836888	G	A	G	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr5	39495540	39495541	chr5:39495541:A:G	chr5:39495541:A:G	A	G	A	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr5	39548089	39548090	chr5:39548090:G:T	rs1501698	G	T	G	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr5	39570534	39570535	chr5:39570535:T:A	rs78372218	T	A	T	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr5	39635380	39635381	chr5:39635381:C:G	rs967738	C	G	C	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr5	39794963	39794964	chr5:39794964:C:T	rs114148897	C	T	C	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr5	39802115	39802116	chr5:39802116:C:G	rs145293839	C	G	C	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr5	40079495	40079496	chr5:40079496:A:G	rs4957116	A	G	A	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr5	40150836	40150837	chr5:40150837:A:G	rs74744421	A	G	A	Hoxd9.mouse_homeodomain_1	4	1	-	7.1462160923678635	4.491169447505284	GCCATAAAC
chr5	40221024	40221025	chr5:40221025:T:C	rs350069	T	C	C	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr5	40347156	40347157	chr5:40347157:A:G	rs16869831	A	G	A	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr5	40554850	40554851	chr5:40554851:C:T	rs1995601	C	T	T	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr5	40791781	40791782	chr5:40791782:C:T	rs13361707	C	T	C	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr5	40994416	40994417	chr5:40994417:A:C	rs6884830	A	C	A	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr5	41091610	41091611	chr5:41091611:G:A	rs62360808	G	A	G	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr5	41649946	41649947	chr5:41649947:C:T	rs316730	C	T	T	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr5	42060740	42060741	chr5:42060741:G:T	rs276243	G	T	G	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr5	42121756	42121757	chr5:42121757:G:T	rs4957461	G	T	G	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr5	42275127	42275128	chr5:42275128:G:A	rs6888449	G	A	G	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr5	42337424	42337425	chr5:42337425:T:C	rs4482914	T	C	C	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr5	42606763	42606764	chr5:42606764:C:T	rs59707000	C	T	C	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr5	42610306	42610307	chr5:42610307:C:T	rs13354167	C	T	C	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr5	42721975	42721976	chr5:42721976:G:A	rs12518414	G	A	G	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr5	42805343	42805344	chr5:42805344:T:C	rs1046068	T	C	T	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr5	42843152	42843153	chr5:42843153:G:C	rs6897301	G	C	.	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr5	42843189	42843190	chr5:42843190:A:G	rs62370957	A	G	.	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr5	43040715	43040716	chr5:43040716:C:T	rs79997163	C	T	C	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr5	43058577	43058578	chr5:43058578:A:G	rs145091354	A	G	A	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr5	43132344	43132345	chr5:43132345:G:A	rs557076	G	A	G	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr5	43210488	43210489	chr5:43210489:A:G	rs77995945	A	G	A	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr5	43839209	43839210	chr5:43839210:A:G	rs7724195	A	G	A	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr5	45029764	45029765	chr5:45029765:C:G	rs7716101	C	G	G	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr5	45491620	45491621	chr5:45491621:A:T	rs79591892	A	T	A	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr5	45491621	45491622	chr5:45491622:G:T	rs75150349	G	T	G	Hoxd9.mouse_homeodomain_1	8	1	-	7.45645131454733	8.98901893988973	CCCATAAAC
chr5	49792169	49792170	chr5:49792170:A:G	rs1213116280	A	G	.	Hoxd9.mouse_homeodomain_1	6	1	+	8.98901893988973	2.285192993297999	CCCATAAAA
chr5	49872420	49872421	chr5:49872421:G:A	rs1304713138	G	A	.	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr5	50667075	50667076	chr5:50667076:C:G	rs767776503	C	G	N	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr5	51802806	51802807	chr5:51802807:A:T	rs7725682	A	T	A	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr5	52007467	52007468	chr5:52007468:T:C	rs1174878563	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.889898683853121	6.555820083990628	ACCATAAAA
chr5	52401664	52401665	chr5:52401665:T:C	rs10940248	T	C	T	Hoxd9.mouse_homeodomain_1	4	1	+	8.409487817756228	5.7544411728936495	CCCATTAAA
chr5	52579317	52579318	chr5:52579318:A:C	rs56740197	A	C	A	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr5	52725158	52725159	chr5:52725159:G:A	rs72752550	G	A	G	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr5	52822169	52822170	chr5:52822170:G:A	rs2406219	G	A	A	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr5	52822771	52822772	chr5:52822772:A:T	chr5:52822772:A:T	A	T	A	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr5	52830923	52830924	chr5:52830924:C:T	rs17277080	C	T	C	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr5	53108922	53108923	chr5:53108923:T:A	rs78846816	T	A	T	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr5	53131775	53131776	chr5:53131776:C:G	rs1374057	C	G	C	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr5	53161062	53161063	chr5:53161063:C:T	rs254596	C	T	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.075409217893736	8.409487817756228	CCCGTTAAA
chr5	53211811	53211812	chr5:53211812:A:G	rs2897475	A	G	G	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr5	53249693	53249694	chr5:53249694:C:T	rs181750773	C	T	C	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr5	53250010	53250011	chr5:53250011:C:T	rs6885965	C	T	C	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr5	53250021	53250022	chr5:53250022:A:G	rs6866517	A	G	A	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr5	53250049	53250050	chr5:53250050:C:A	rs252048	C	A	C	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr5	53318562	53318563	chr5:53318563:A:C	rs80287464	A	C	A	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr5	53445634	53445635	chr5:53445635:T:A	rs79170297	T	A	T	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr5	53516095	53516096	chr5:53516096:C:T	rs72748128	C	T	C	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr5	53571499	53571500	chr5:53571500:T:G	rs7728496	T	G	G	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr5	53607784	53607785	chr5:53607785:A:G	rs377077	A	G	A	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr5	53749793	53749794	chr5:53749794:C:A	rs79028645	C	A	C	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr5	54090940	54090941	chr5:54090941:G:T	chr5:54090941:G:T	G	T	G	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr5	54212833	54212834	chr5:54212834:G:C	rs981714	G	C	G	Hoxd9.mouse_homeodomain_1	2	1	-	8.409487817756228	4.941496160303898	CCCATTAAA
chr5	54288723	54288724	chr5:54288724:C:T	rs17441397	C	T	T	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr5	54390142	54390143	chr5:54390143:T:G	rs11957274	T	G	T	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr5	54425317	54425318	chr5:54425318:T:C	rs9292056	T	C	C	Hoxd9.mouse_homeodomain_1	3	1	-	8.409487817756228	7.075409217893736	CCCATTAAA
chr5	54525870	54525871	chr5:54525871:C:T	rs2548606	C	T	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.654940340027237	8.98901893988973	CCCGTAAAA
chr5	54619995	54619996	chr5:54619996:C:T	rs2194250	C	T	c	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr5	54624899	54624900	chr5:54624900:C:T	rs114709172	C	T	C	Hoxd9.mouse_homeodomain_1	2	1	+	7.654940340027237	1.1674998824035994	CCCGTAAAA
chr5	54667070	54667071	chr5:54667071:G:C	rs11742037	G	C	G	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr5	54765962	54765963	chr5:54765963:C:T	rs76957260	C	T	C	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr5	54829748	54829749	chr5:54829749:A:G	rs9968754	A	G	G	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr5	54851462	54851463	chr5:54851463:T:C	rs35680329	T	C	T	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr5	55093942	55093943	chr5:55093943:G:T	rs530432348	G	T	G	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr5	55429696	55429697	chr5:55429697:A:G	rs192508997	A	G	A	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr5	55429733	55429734	chr5:55429734:C:G	rs1225390911	C	G	C	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr5	55494730	55494731	chr5:55494731:C:A	rs10079783	C	A	C	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr5	55601335	55601336	chr5:55601336:T:C	rs73128140	T	C	T	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr5	55608976	55608977	chr5:55608977:C:T	rs11745519	C	T	C	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr5	55609010	55609011	chr5:55609011:A:G	rs11748878	A	G	G	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr5	55773347	55773348	chr5:55773348:G:A	rs12656770	G	A	A	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr5	55839414	55839415	chr5:55839415:C:T	rs10066741	C	T	T	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr5	55839454	55839455	chr5:55839455:C:T	rs10076398	C	T	T	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr5	55914611	55914612	chr5:55914612:G:A	rs161702	G	A	A	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr5	55915192	55915193	chr5:55915193:G:A	rs79241378	G	A	G	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr5	56059180	56059181	chr5:56059181:T:C	rs10036423	T	C	T	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr5	56105770	56105771	chr5:56105771:A:G	rs191205	A	G	G	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr5	56113187	56113188	chr5:56113188:G:A	rs77659690	G	A	G	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr5	56290819	56290820	chr5:56290820:A:G	rs115110096	A	G	A	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr5	56384189	56384190	chr5:56384190:C:T	rs73758717	C	T	C	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr5	56407599	56407600	chr5:56407600:G:A	rs6450389	G	A	A	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr5	56438833	56438834	chr5:56438834:C:G	rs245802	C	G	g	Hoxd9.mouse_homeodomain_1	8	1	-	7.522691831404475	7.45645131454733	CCCATAAAG
chr5	56494706	56494707	chr5:56494707:C:T	rs932902405	C	T	C	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr5	56609119	56609120	chr5:56609120:C:T	rs17716231	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	+	8.409487817756228	6.514940512447287	CCCATTAAA
chr5	56797543	56797544	chr5:56797544:A:G	rs6870175	A	G	G	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr5	57157579	57157580	chr5:57157580:G:T	rs6450418	G	T	T	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr5	57431928	57431929	chr5:57431929:T:C	rs72763465	T	C	T	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr5	57431956	57431957	chr5:57431957:G:A	rs59987789	G	A	G	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr5	57435649	57435650	chr5:57435650:G:A	rs559898049	G	A	G	Hoxd9.mouse_homeodomain_1	0	1	-	8.409487817756228	6.514940512447287	CCCATTAAA
chr5	57445541	57445542	chr5:57445542:G:T	rs971698585	G	T	G	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr5	57697633	57697634	chr5:57697634:T:A	rs750857877	T	A	T	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr5	57697657	57697658	chr5:57697658:T:C	rs2898027	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.287463081002919	6.953384481140425	CCAATAAAA
chr5	57776732	57776733	chr5:57776733:C:T	rs10447121	C	T	C	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr5	57839081	57839082	chr5:57839082:C:T	rs58174590	C	T	C	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr5	57850298	57850299	chr5:57850299:A:T	rs17691299	A	T	A	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr5	58038836	58038837	chr5:58038837:A:G	rs67198509	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.287463081002919	6.953384481140425	CCAATAAAA
chr5	58047750	58047751	chr5:58047751:A:G	rs1352615	A	G	A	Hoxd9.mouse_homeodomain_1	8	1	+	8.678783717710262	7.212456609225008	GCCATAAAA
chr5	58259041	58259042	chr5:58259042:T:C	rs143237439	T	C	T	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr5	58440890	58440891	chr5:58440891:C:G	rs11958495	C	G	C	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr5	58488985	58488986	chr5:58488986:T:C	rs1559240	T	C	C	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr5	58581989	58581990	chr5:58581990:G:A	rs181283320	G	A	G	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr5	58666918	58666919	chr5:58666919:A:G	rs17280874	A	G	A	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr5	58666950	58666951	chr5:58666951:T:C	rs9292171	T	C	T	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr5	59065697	59065698	chr5:59065698:G:A	rs114027888	G	A	G	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr5	59266490	59266491	chr5:59266491:A:G	rs148082290	A	G	A	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr5	59543910	59543911	chr5:59543911:T:C	rs191136587	T	C	T	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr5	59563560	59563561	chr5:59563561:T:C	chr5:59563561:T:C	T	C	T	Hoxd9.mouse_homeodomain_1	5	1	-	7.212456609225008	0.8382668909784519	GCCATAAAG
chr5	59653430	59653431	chr5:59653431:T:C	rs2576455	T	C	T	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr5	59724627	59724628	chr5:59724628:A:G	rs17799191	A	G	A	Hoxd9.mouse_homeodomain_1	4	1	-	8.287463081002919	5.632416436140341	CCAATAAAA
chr5	59758492	59758493	chr5:59758493:G:A	rs6889294	G	A	A	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr5	59982365	59982366	chr5:59982366:G:A	rs10044523	G	A	G	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr5	60487699	60487700	chr5:60487700:T:G	rs1321729371	T	G	T	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr5	60686336	60686337	chr5:60686337:C:T	rs80138086	C	T	c	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr5	60702058	60702059	chr5:60702059:A:C	rs1379115	A	C	A	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr5	60987321	60987322	chr5:60987322:A:T	rs329625	A	T	T	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr5	61080587	61080588	chr5:61080588:T:C	rs13357828	T	C	T	Hoxd9.mouse_homeodomain_1	6	1	-	7.716978748812629	1.0131528022208975	GACATAAAA
chr5	61332169	61332170	chr5:61332170:C:G	rs993948633	C	G	C	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr5	61370713	61370714	chr5:61370714:T:A	rs1360522078	T	A	T	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr5	61640079	61640080	chr5:61640080:C:G	rs12514870	C	G	C	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr5	61738840	61738841	chr5:61738841:G:A	rs6449551	G	A	G	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr5	62001970	62001971	chr5:62001971:C:T	rs79280388	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	+	8.409487817756228	6.514940512447287	CCCATTAAA
chr5	62223811	62223812	chr5:62223812:C:G	rs569355518	C	G	.	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr5	62304037	62304038	chr5:62304038:A:C	rs35572300	A	C	A	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr5	62312246	62312247	chr5:62312247:A:G	rs12655562	A	G	A	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr5	63308416	63308417	chr5:63308417:C:A	rs346435	C	A	A	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr5	63513339	63513340	chr5:63513340:G:A	rs10057909	G	A	G	Hoxd9.mouse_homeodomain_1	5	1	-	7.091711387329735	8.409487817756228	CCCATCAAA
chr5	63963315	63963316	chr5:63963316:T:C	rs115044979	T	C	T	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr5	64594114	64594115	chr5:64594115:C:T	rs76702682	C	T	T	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr5	64688471	64688472	chr5:64688472:C:A	rs10471305	C	A	C	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr5	65062062	65062063	chr5:65062063:T:G	rs1159105	T	G	T	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr5	65312102	65312103	chr5:65312103:G:C	rs10514980	G	C	G	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr5	65651381	65651382	chr5:65651382:G:A	rs154852	G	A	A	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr5	65808097	65808098	chr5:65808098:G:A	rs12657670	G	A	G	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr5	66024024	66024025	chr5:66024025:A:G	rs10066817	A	G	A	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr5	66532452	66532453	chr5:66532453:C:T	rs73764023	C	T	T	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr5	66594515	66594516	chr5:66594516:A:T	rs12523194	A	T	A	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr5	66705272	66705273	chr5:66705273:A:G	rs61707595	A	G	G	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr5	66789510	66789511	chr5:66789511:T:G	rs1982328	T	G	G	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr5	66933388	66933389	chr5:66933389:G:A	rs16895988	G	A	A	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr5	66982007	66982008	chr5:66982008:C:T	rs72763027	C	T	C	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr5	67180022	67180023	chr5:67180023:T:A	rs6890674	T	A	A	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr5	67288811	67288812	chr5:67288812:T:C	rs10940098	T	C	t	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr5	67622832	67622833	chr5:67622833:C:A	rs116701090	C	A	C	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr5	67679203	67679204	chr5:67679204:G:A	rs11952144	G	A	G	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr5	67695302	67695303	chr5:67695303:A:G	rs6875664	A	G	G	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr5	67896846	67896847	chr5:67896847:C:A	rs72647228	C	A	A	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr5	67896868	67896869	chr5:67896869:A:G	rs67840911	A	G	A	Hoxd9.mouse_homeodomain_1	4	1	-	7.716978748812629	5.061932103950051	GACATAAAA
chr5	68153949	68153950	chr5:68153950:C:T	rs12657279	C	T	C	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr5	68170948	68170949	chr5:68170949:C:A	rs116637346	C	A	C	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr5	68243345	68243346	chr5:68243346:T:G	rs56351136	T	G	T	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr5	68345399	68345400	chr5:68345400:T:G	rs114642236	T	G	T	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr5	68455393	68455394	chr5:68455394:A:C	rs42905	A	C	C	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr5	68455553	68455554	chr5:68455554:G:A	rs36297	G	A	A	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr5	68460047	68460048	chr5:68460048:G:A	rs853804	G	A	A	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr5	68550457	68550458	chr5:68550458:C:A	rs13179783	C	A	A	Hoxd9.mouse_homeodomain_1	2	1	+	7.716978748812629	7.0154228899258175	GACATAAAA
chr5	68672699	68672700	chr5:68672700:T:A	rs10062676	T	A	A	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr5	68672986	68672987	chr5:68672987:T:A	rs255246	T	A	A	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr5	68799424	68799425	chr5:68799425:T:G	rs6898750	T	G	T	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr5	69000617	69000618	chr5:69000618:A:G	rs7732834	A	G	G	Hoxd9.mouse_homeodomain_1	3	1	+	7.45645131454733	6.122372714684838	CCCATAAAC
chr5	69190448	69190449	chr5:69190449:T:C	rs1486568609	T	C	T	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr5	69190451	69190452	chr5:69190452:T:C	rs142669060	T	C	T	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr5	69368687	69368688	chr5:69368688:C:T	rs3756402	C	T	C	Hoxd9.mouse_homeodomain_1	1	1	+	7.9772278588234515	6.662425944490444	GCAATAAAA
chr5	69493204	69493205	chr5:69493205:T:C	rs181733277	T	C	T	Hoxd9.mouse_homeodomain_1	6	1	-	8.98901893988973	2.285192993297999	CCCATAAAA
chr5	69493211	69493212	chr5:69493212:G:A	rs145044535	G	A	G	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr5	69525692	69525693	chr5:69525693:T:A	rs560325579	T	A	T	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr5	71012423	71012424	chr5:71012424:C:T	rs28409706	C	T	-	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr5	72018464	72018465	chr5:72018465:G:A	rs77550030	G	A	G	Hoxd9.mouse_homeodomain_1	0	1	-	8.98901893988973	7.094471634580788	CCCATAAAA
chr5	72109052	72109053	chr5:72109053:C:T	rs576432266	C	T	C	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr5	72195134	72195135	chr5:72195135:A:G	rs1866374	A	G	G	Hoxd9.mouse_homeodomain_1	3	1	+	8.287463081002919	6.953384481140425	CCAATAAAA
chr5	72388390	72388391	chr5:72388391:A:C	rs10474048	A	C	A	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr5	72494981	72494982	chr5:72494982:G:A	rs10056589	G	A	A	Hoxd9.mouse_homeodomain_1	2	1	-	7.34470511784777	0.8572646602241328	GCCGTAAAA
chr5	73050616	73050617	chr5:73050617:C:T	rs114045503	C	T	C	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr5	73160439	73160440	chr5:73160440:A:G	rs9293528	A	G	A	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr5	73160464	73160465	chr5:73160465:C:T	rs6871051	C	T	C	Hoxd9.mouse_homeodomain_1	3	1	-	7.075409217893736	8.409487817756228	CCCGTTAAA
chr5	73273735	73273736	chr5:73273736:T:C	rs7708879	T	C	C	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr5	73314702	73314703	chr5:73314703:C:T	rs4389670	C	T	C	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr5	73531562	73531563	chr5:73531563:C:G	rs6868492	C	G	G	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr5	73636994	73636995	chr5:73636995:G:A	rs988826	G	A	A	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr5	73705643	73705644	chr5:73705644:A:G	rs59216006	A	G	G	Hoxd9.mouse_homeodomain_1	5	1	-	8.409487817756228	7.091711387329735	CCCATTAAA
chr5	73726749	73726750	chr5:73726750:G:C	rs73762179	G	C	T	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr5	73780461	73780462	chr5:73780462:A:G	chr5:73780462:A:G	A	G	A	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr5	73831323	73831324	chr5:73831324:G:A	rs75463560	G	A	A	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr5	73908910	73908911	chr5:73908911:T:C	rs283620	T	C	T	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr5	73915147	73915148	chr5:73915148:G:T	rs282404	G	T	G	Hoxd9.mouse_homeodomain_1	0	1	-	8.287463081002919	7.188342824966311	CCAATAAAA
chr5	73935840	73935841	chr5:73935841:C:A	rs536568	C	A	A	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr5	74030692	74030693	chr5:74030693:T:C	rs376049	T	C	T	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr5	74094789	74094790	chr5:74094790:T:A	rs17734801	T	A	T	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr5	74122003	74122004	chr5:74122004:T:C	rs6453041	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.98901893988973	7.654940340027237	CCCATAAAA
chr5	74136175	74136176	chr5:74136176:G:A	rs12517914	G	A	A	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr5	74419206	74419207	chr5:74419207:A:G	rs295689	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.287463081002919	6.953384481140425	CCAATAAAA
chr5	74420292	74420293	chr5:74420293:C:T	rs295688	C	T	C	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr5	74464581	74464582	chr5:74464582:T:C	rs2035226	T	C	T	Hoxd9.mouse_homeodomain_1	1	1	-	7.716978748812629	2.2692504889278973	GACATAAAA
chr5	75041117	75041118	chr5:75041118:T:C	rs7730062	T	C	c	Hoxd9.mouse_homeodomain_1	3	1	-	8.98901893988973	7.654940340027237	CCCATAAAA
chr5	75241925	75241926	chr5:75241926:C:T	rs4704197	C	T	T	Hoxd9.mouse_homeodomain_1	2	1	+	7.716978748812629	1.2295382911889927	GACATAAAA
chr5	75513694	75513695	chr5:75513695:C:T	rs139470455	C	T	C	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr5	75843409	75843410	chr5:75843410:C:T	rs62361789	C	T	C	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr5	76050084	76050085	chr5:76050085:C:T	rs2731732	C	T	T	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr5	76270680	76270681	chr5:76270681:C:T	rs2972831	C	T	C	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr5	76327475	76327476	chr5:76327476:G:A	rs114035361	G	A	G	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr5	76483609	76483610	chr5:76483610:A:G	rs4074256	A	G	a	Hoxd9.mouse_homeodomain_1	1	1	+	8.027213970992095	2.5794857111073646	CACATAAAA
chr5	76519378	76519379	chr5:76519379:A:G	rs62361967	A	G	A	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr5	76643433	76643434	chr5:76643434:A:G	rs2910820	A	G	A	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr5	76692608	76692609	chr5:76692609:A:C	rs6884442	A	C	A	Hoxd9.mouse_homeodomain_1	7	1	+	7.212456609225008	4.323040839194422	GCCATAAAG
chr5	76746950	76746951	chr5:76746951:T:C	rs250742	T	C	T	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr5	76855853	76855854	chr5:76855854:A:G	rs2434648	A	G	A	Hoxd9.mouse_homeodomain_1	7	1	+	7.091711387329735	0.38788544073800313	CCCATCAAA
chr5	76938353	76938354	chr5:76938354:A:C	rs1715757	A	C	A	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr5	77031375	77031376	chr5:77031376:T:G	rs75686028	T	G	T	Hoxd9.mouse_homeodomain_1	5	1	+	8.409487817756228	2.6148292216431743	CCCATTAAA
chr5	77067450	77067451	chr5:77067451:A:G	rs72765119	A	G	A	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr5	77335412	77335413	chr5:77335413:C:T	rs17671296	C	T	T	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr5	77338823	77338824	chr5:77338824:G:A	rs4704408	G	A	A	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr5	77339476	77339477	chr5:77339477:G:A	rs73136859	G	A	G	Hoxd9.mouse_homeodomain_1	0	1	-	8.027213970992095	6.132666665683155	CACATAAAA
chr5	77400508	77400509	chr5:77400509:C:T	rs3733952	C	T	c	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr5	77427051	77427052	chr5:77427052:C:A	rs1061405	C	A	C	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr5	77427065	77427066	chr5:77427066:T:C	rs460267	T	C	t	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr5	77427069	77427070	chr5:77427070:A:G	rs459366	A	G	A	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr5	77574797	77574798	chr5:77574798:C:T	rs6453329	C	T	T	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr5	77709927	77709928	chr5:77709928:T:C	rs351877	T	C	T	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr5	77722034	77722035	chr5:77722035:T:C	rs71632935	T	C	T	Hoxd9.mouse_homeodomain_1	8	1	-	8.678783717710262	7.212456609225008	GCCATAAAA
chr5	77952705	77952706	chr5:77952706:C:G	rs355422	C	G	C	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr5	77996977	77996978	chr5:77996978:C:A	rs16874989	C	A	A	Hoxd9.mouse_homeodomain_1	2	1	+	7.716978748812629	7.0154228899258175	GACATAAAA
chr5	78162325	78162326	chr5:78162326:T:G	rs4704484	T	G	G	Hoxd9.mouse_homeodomain_1	5	1	-	7.1462160923678635	5.248908539807868	GCCATAAAC
chr5	78162486	78162487	chr5:78162487:G:A	rs1185402764	G	A	G	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr5	78162517	78162518	chr5:78162518:A:T	rs78244103	A	T	A	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr5	78288326	78288327	chr5:78288327:A:C	rs12186414	A	C	C	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr5	78288327	78288328	chr5:78288328:C:T	rs6880507	C	T	T	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr5	78374968	78374969	chr5:78374969:T:G	rs10078289	T	G	T	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr5	78377407	78377408	chr5:78377408:G:T	rs12654349	G	T	G	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr5	78501822	78501823	chr5:78501823:A:C	rs11738126	A	C	A	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr5	78706789	78706790	chr5:78706790:C:T	rs920583	C	T	C	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr5	78706827	78706828	chr5:78706828:T:C	rs920584	T	C	T	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr5	78780000	78780001	chr5:78780001:G:A	rs114935268	G	A	G	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr5	78791417	78791418	chr5:78791418:C:G	rs1246042996	C	G	C	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr5	78798738	78798739	chr5:78798739:C:T	rs77591443	C	T	C	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr5	78890734	78890735	chr5:78890735:C:T	rs11741352	C	T	C	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr5	78912424	78912425	chr5:78912425:G:A	rs74867084	G	A	G	Hoxd9.mouse_homeodomain_1	1	1	-	7.522691831404475	6.207889917071467	CCCATAAAG
chr5	78979944	78979945	chr5:78979945:T:C	rs594686	T	C	C	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr5	78984632	78984633	chr5:78984633:G:A	rs114065374	G	A	G	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr5	78984663	78984664	chr5:78984664:G:A	rs76378610	G	A	G	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr5	79329765	79329766	chr5:79329766:A:T	rs13177425	A	T	A	Hoxd9.mouse_homeodomain_1	7	1	+	7.45645131454733	5.709367499706518	CCCATAAAC
chr5	79345429	79345430	chr5:79345430:C:A	rs9293775	C	A	C	Hoxd9.mouse_homeodomain_1	0	1	-	7.9772278588234515	6.392915775693977	GCAATAAAA
chr5	79481712	79481713	chr5:79481713:A:G	rs59028763	A	G	G	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr5	79486423	79486424	chr5:79486424:T:C	rs61441875	T	C	T	Hoxd9.mouse_homeodomain_1	4	1	+	7.716978748812629	5.061932103950051	GACATAAAA
chr5	79547358	79547359	chr5:79547359:C:T	rs4704562	C	T	c	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr5	79633120	79633121	chr5:79633121:G:A	rs9942409	G	A	G	Hoxd9.mouse_homeodomain_1	2	1	-	7.091711387329735	0.6042709297060974	CCCATCAAA
chr5	79812712	79812713	chr5:79812713:C:T	rs34018081	C	T	C	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr5	79874162	79874163	chr5:79874163:G:A	rs264987	G	A	A	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr5	79877480	79877481	chr5:79877481:G:A	rs73770639	G	A	A	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr5	79993270	79993271	chr5:79993271:T:C	rs75676285	T	C	T	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr5	80083265	80083266	chr5:80083266:G:A	rs145312661	G	A	G	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr5	80180959	80180960	chr5:80180960:T:C	rs11953632	T	C	T	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr5	80192032	80192033	chr5:80192033:C:G	rs752097475	C	G	C	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr5	80327364	80327365	chr5:80327365:A:G	rs74643058	A	G	A	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr5	80655210	80655211	chr5:80655211:G:A	rs6151598	G	A	G	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr5	80655212	80655213	chr5:80655213:A:G	rs6151599	A	G	A	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr5	80656214	80656215	chr5:80656215:A:G	rs380691	A	G	A	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr5	80763478	80763479	chr5:80763479:C:G	rs77237803	C	G	C	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr5	80956199	80956200	chr5:80956200:C:A	rs115507558	C	A	T	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr5	81059082	81059083	chr5:81059083:C:T	rs11746440	C	T	T	Hoxd9.mouse_homeodomain_1	2	1	+	7.075409217893736	0.5879687602700975	CCCGTTAAA
chr5	81151543	81151544	chr5:81151544:T:A	rs35673979	T	A	T	Hoxd9.mouse_homeodomain_1	2	1	-	8.287463081002919	2.5015784822660927	CCAATAAAA
chr5	81417276	81417277	chr5:81417277:T:G	rs11949697	T	G	G	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr5	81612050	81612051	chr5:81612051:T:C	rs35862056	T	C	T	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr5	81776436	81776437	chr5:81776437:G:A	rs16899169	G	A	G	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr5	81802713	81802714	chr5:81802714:G:T	chr5:81802714:G:T	G	T	G	Hoxd9.mouse_homeodomain_1	8	1	+	7.212456609225008	5.746270592944195	GCCATAAAG
chr5	81969984	81969985	chr5:81969985:T:C	rs76927494	T	C	T	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr5	82037541	82037542	chr5:82037542:C:T	rs140890049	C	T	-	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr5	82161139	82161140	chr5:82161140:G:A	rs554211799	G	A	G	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr5	82278624	82278625	chr5:82278625:T:A	chr5:82278625:T:A	T	A	C	Hoxd9.mouse_homeodomain_1	5	1	-	8.98901893988973	8.409487817756228	CCCATAAAA
chr5	82551295	82551296	chr5:82551296:A:G	rs17309089	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	7.889898683853121	6.555820083990628	ACCATAAAA
chr5	82601136	82601137	chr5:82601137:T:G	rs1847035	T	G	G	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr5	82639697	82639698	chr5:82639698:C:G	rs115756964	C	G	C	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr5	82689579	82689580	chr5:82689580:G:A	rs191005619	G	A	G	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr5	82774670	82774671	chr5:82774671:T:C	rs9293315	T	C	T	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr5	82925038	82925039	chr5:82925039:T:A	rs10514245	T	A	T	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr5	83377288	83377289	chr5:83377289:T:G	rs77922842	T	G	G	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr5	83548305	83548306	chr5:83548306:T:C	chr5:83548306:T:C	T	C	T	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr5	83595485	83595486	chr5:83595486:A:G	rs76738717	A	G	A	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr5	83642907	83642908	chr5:83642908:C:A	rs4703570	C	A	A	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr5	83697009	83697010	chr5:83697010:C:T	rs12153751	C	T	C	Hoxd9.mouse_homeodomain_1	2	1	+	7.654940340027237	1.1674998824035994	CCCGTAAAA
chr5	83837401	83837402	chr5:83837402:C:T	rs62362770	C	T	C	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr5	83875173	83875174	chr5:83875174:C:T	rs34417766	C	T	C	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr5	83906363	83906364	chr5:83906364:T:C	rs6898404	T	C	C	Hoxd9.mouse_homeodomain_1	3	1	-	7.1462160923678635	5.81213749250537	GCCATAAAC
chr5	83925732	83925733	chr5:83925733:C:A	rs13188822	C	A	C	Hoxd9.mouse_homeodomain_1	0	1	-	7.212456609225008	5.628144526095533	GCCATAAAG
chr5	83974144	83974145	chr5:83974145:G:A	rs12513999	G	A	A	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr5	85514193	85514194	chr5:85514194:G:A	rs10942388	G	A	G	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr5	85514201	85514202	chr5:85514202:T:C	rs552273	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.287463081002919	6.953384481140425	CCAATAAAA
chr5	85824128	85824129	chr5:85824129:G:A	rs56282148	G	A	G	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr5	85938114	85938115	chr5:85938115:A:G	rs7701756	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.027213970992095	6.693135371129603	CACATAAAA
chr5	86309663	86309664	chr5:86309664:A:T	rs6888314	A	T	.	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr5	86458712	86458713	chr5:86458713:A:G	rs62374948	A	G	G	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr5	86666193	86666194	chr5:86666194:A:C	rs12697767	A	C	C	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr5	86841147	86841148	chr5:86841148:C:A	rs7701313	C	A	A	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr5	86867933	86867934	chr5:86867934:A:G	rs4244386	A	G	G	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr5	86917154	86917155	chr5:86917155:G:C	rs149824745	G	C	G	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr5	87164721	87164722	chr5:87164722:G:A	rs30421	G	A	G	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr5	87267604	87267605	chr5:87267605:C:G	rs1005000306	C	G	C	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr5	87267622	87267623	chr5:87267623:G:A	rs561231534	G	A	G	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr5	88292208	88292209	chr5:88292209:A:G	rs4916899	A	G	G	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr5	88445130	88445131	chr5:88445131:A:G	rs10452479	A	G	T	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr5	88792386	88792387	chr5:88792387:G:A	rs10462335	G	A	G	Hoxd9.mouse_homeodomain_1	2	1	-	7.889898683853121	1.4024582262294842	ACCATAAAA
chr5	88888509	88888510	chr5:88888510:T:C	rs189174067	T	C	T	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr5	88942370	88942371	chr5:88942371:T:C	rs150433350	T	C	T	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr5	89527196	89527197	chr5:89527197:G:A	rs6878642	G	A	A	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr5	89964239	89964240	chr5:89964240:T:C	rs6861634	T	C	T	Hoxd9.mouse_homeodomain_1	5	1	-	8.98901893988973	2.6148292216431743	CCCATAAAA
chr5	90023079	90023080	chr5:90023080:T:G	rs11949266	T	G	G	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr5	90093879	90093880	chr5:90093880:C:T	rs157237	C	T	T	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr5	90548382	90548383	chr5:90548383:T:C	rs965417710	T	C	T	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr5	91053445	91053446	chr5:91053446:A:G	rs12188249	A	G	A	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr5	91065670	91065671	chr5:91065671:A:G	rs6865615	A	G	A	Hoxd9.mouse_homeodomain_1	8	1	+	8.027213970992095	6.560886862506841	CACATAAAA
chr5	91111180	91111181	chr5:91111181:A:G	rs2973450	A	G	A	Hoxd9.mouse_homeodomain_1	5	1	+	8.027213970992095	1.6530242527455408	CACATAAAA
chr5	91122601	91122602	chr5:91122602:G:A	rs2950855	G	A	A	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr5	91742692	91742693	chr5:91742693:G:A	rs80319796	G	A	G	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr5	91850282	91850283	chr5:91850283:A:G	rs10079624	A	G	A	Hoxd9.mouse_homeodomain_1	4	1	-	7.716978748812629	5.061932103950051	GACATAAAA
chr5	92372929	92372930	chr5:92372930:T:G	rs900942768	T	G	T	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr5	92432033	92432034	chr5:92432034:A:G	rs141499521	A	G	A	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr5	92581276	92581277	chr5:92581277:C:T	rs142644029	C	T	C	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr5	92795586	92795587	chr5:92795587:T:C	rs10866772	T	C	T	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr5	92795608	92795609	chr5:92795609:T:C	rs2112412	T	C	C	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr5	92991609	92991610	chr5:92991610:T:C	rs890589806	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.212456609225008	5.878378009362515	GCCATAAAG
chr5	93236121	93236122	chr5:93236122:T:C	rs73129377	T	C	T	Hoxd9.mouse_homeodomain_1	7	1	-	7.45645131454733	0.752625367955599	CCCATAAAC
chr5	93303572	93303573	chr5:93303573:G:A	rs116460150	G	A	G	Hoxd9.mouse_homeodomain_1	0	1	-	8.027213970992095	6.132666665683155	CACATAAAA
chr5	93303575	93303576	chr5:93303576:C:A	rs190934119	C	A	C	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr5	93330924	93330925	chr5:93330925:A:G	rs114712611	A	G	A	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr5	93426715	93426716	chr5:93426716:C:T	rs73133217	C	T	C	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr5	93510552	93510553	chr5:93510553:C:T	rs17083191	C	T	T	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr5	93586409	93586410	chr5:93586410:T:A	rs58823370	T	A	A	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr5	93995578	93995579	chr5:93995579:A:G	rs13169675	A	G	A	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr5	94622827	94622828	chr5:94622828:G:A	rs73134696	G	A	G	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr5	94746302	94746303	chr5:94746303:C:A	rs6874244	C	A	C	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr5	94746343	94746344	chr5:94746344:C:T	rs17083994	C	T	C	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr5	94821446	94821447	chr5:94821447:T:A	rs11135413	T	A	T	Hoxd9.mouse_homeodomain_1	8	1	-	8.027213970992095	5.094700846226028	CACATAAAA
chr5	94901692	94901693	chr5:94901693:C:T	rs26998	C	T	C	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr5	95049248	95049249	chr5:95049249:G:A	rs2881646	G	A	A	Hoxd9.mouse_homeodomain_1	3	1	+	7.075409217893736	8.409487817756228	CCCGTTAAA
chr5	95080202	95080203	chr5:95080203:G:A	rs78573560	G	A	G	Hoxd9.mouse_homeodomain_1	1	1	-	8.678783717710262	7.363981803377255	GCCATAAAA
chr5	95080211	95080212	chr5:95080212:C:T	rs10515222	C	T	C	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr5	95224099	95224100	chr5:95224100:G:T	rs12108709	G	T	G	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr5	95673031	95673032	chr5:95673032:G:A	rs6890085	G	A	g	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr5	95711082	95711083	chr5:95711083:T:C	rs117583673	T	C	T	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr5	95857071	95857072	chr5:95857072:C:G	rs2080947	C	G	C	Hoxd9.mouse_homeodomain_1	2	1	+	7.889898683853121	4.421907026400791	ACCATAAAA
chr5	95953693	95953694	chr5:95953694:A:G	rs6898399	A	G	A	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr5	96036403	96036404	chr5:96036404:C:T	rs78951428	C	T	C	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr5	96115789	96115790	chr5:96115790:T:C	rs4613744	T	C	T	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr5	96287504	96287505	chr5:96287505:A:G	rs1158506293	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	7.522691831404475	6.188613231541982	CCCATAAAG
chr5	96406909	96406910	chr5:96406910:A:G	rs156016	A	G	A	Hoxd9.mouse_homeodomain_1	1	1	+	8.027213970992095	2.5794857111073646	CACATAAAA
chr5	96658462	96658463	chr5:96658463:G:A	rs73774355	G	A	A	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr5	96661799	96661800	chr5:96661800:A:G	rs919811373	A	G	A	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr5	96661802	96661803	chr5:96661803:C:T	rs114643311	C	T	C	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr5	96680864	96680865	chr5:96680865:A:G	rs26484	A	G	A	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr5	96713009	96713010	chr5:96713010:G:A	rs56116814	G	A	g	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr5	96742837	96742838	chr5:96742838:C:T	rs78142752	C	T	T	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr5	96816732	96816733	chr5:96816733:G:C	rs35469836	G	C	G	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr5	96870913	96870914	chr5:96870914:C:T	rs75908370	C	T	T	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr5	96888416	96888417	chr5:96888417:A:G	rs1559354	A	G	g	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr5	97073358	97073359	chr5:97073359:T:A	rs59781414	T	A	T	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr5	97186970	97186971	chr5:97186971:A:G	rs12653352	A	G	A	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr5	97229575	97229576	chr5:97229576:G:A	rs17630655	G	A	G	Hoxd9.mouse_homeodomain_1	2	1	-	7.889898683853121	1.4024582262294842	ACCATAAAA
chr5	97576211	97576212	chr5:97576212:T:C	rs72775925	T	C	C	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr5	97608564	97608565	chr5:97608565:G:A	rs990696	G	A	G	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr5	97643952	97643953	chr5:97643953:C:T	rs72775970	C	T	C	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr5	97759886	97759887	chr5:97759887:C:A	rs4380691	C	A	C	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr5	97803743	97803744	chr5:97803744:G:A	rs73145378	G	A	G	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr5	97839599	97839600	chr5:97839600:G:C	rs142045394	G	C	.	Hoxd9.mouse_homeodomain_1	2	1	-	7.889898683853121	4.421907026400791	ACCATAAAA
chr5	98474358	98474359	chr5:98474359:C:A	rs4577723	C	A	C	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr5	98474988	98474989	chr5:98474989:G:A	rs10074098	G	A	G	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr5	98499976	98499977	chr5:98499977:T:C	rs754246	T	C	T	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr5	98661961	98661962	chr5:98661962:G:A	rs77694828	G	A	G	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr5	98771577	98771578	chr5:98771578:T:C	rs79139926	T	C	T	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr5	98905784	98905785	chr5:98905785:G:A	rs326463	G	A	A	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr5	98938896	98938897	chr5:98938897:A:G	rs17166454	A	G	A	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr5	99438304	99438305	chr5:99438305:C:G	rs11241054	C	G	.	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr5	99814461	99814462	chr5:99814462:G:A	rs6879586	G	A	A	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr5	99955733	99955734	chr5:99955734:G:C	rs12652262	G	C	G	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr5	100643683	100643684	chr5:100643684:T:G	rs17158184	T	G	T	Hoxd9.mouse_homeodomain_1	7	1	-	8.027213970992095	5.137798200961511	CACATAAAA
chr5	101004337	101004338	chr5:101004338:G:A	rs116108976	G	A	g	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr5	101292766	101292767	chr5:101292767:C:A	rs7707543	C	A	A	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr5	101518673	101518674	chr5:101518674:A:T	rs1491035	A	T	A	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr5	102375544	102375545	chr5:102375545:T:C	rs1901515	T	C	T	Hoxd9.mouse_homeodomain_1	4	1	+	8.409487817756228	5.7544411728936495	CCCATTAAA
chr5	102750640	102750641	chr5:102750641:C:T	rs451598	C	T	T	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr5	102809131	102809132	chr5:102809132:T:C	rs79080981	T	C	T	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr5	102857326	102857327	chr5:102857327:C:T	rs74684959	C	T	C	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr5	102873711	102873712	chr5:102873712:C:T	rs11959693	C	T	C	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr5	103036901	103036902	chr5:103036902:G:A	rs56235607	G	A	G	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr5	103128662	103128663	chr5:103128663:T:C	rs28022	T	C	T	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr5	103233676	103233677	chr5:103233677:C:G	rs458598	C	G	g	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr5	103514566	103514567	chr5:103514567:G:A	chr5:103514567:G:A	G	A	G	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr5	103562836	103562837	chr5:103562837:G:A	rs566076776	G	A	G	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr5	103562850	103562851	chr5:103562851:A:T	rs1358255485	A	T	A	Hoxd9.mouse_homeodomain_1	4	1	-	8.98901893988973	2.147200492559124	CCCATAAAA
chr5	103764209	103764210	chr5:103764210:A:C	rs11739482	A	C	A	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr5	104432174	104432175	chr5:104432175:G:A	rs2963207	G	A	G	Hoxd9.mouse_homeodomain_1	3	1	+	7.34470511784777	8.678783717710262	GCCGTAAAA
chr5	104986677	104986678	chr5:104986678:C:T	rs2964705	C	T	C	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr5	105532160	105532161	chr5:105532161:T:C	rs13185979	T	C	T	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr5	105687594	105687595	chr5:105687595:A:T	rs34561069	A	T	A	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr5	105784381	105784382	chr5:105784382:A:G	rs398632	A	G	A	Hoxd9.mouse_homeodomain_1	8	1	+	8.027213970992095	6.560886862506841	CACATAAAA
chr5	106162744	106162745	chr5:106162745:T:C	rs62377572	T	C	T	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr5	106364687	106364688	chr5:106364688:G:A	rs72788917	G	A	G	Hoxd9.mouse_homeodomain_1	2	1	-	7.241935125048919	0.7544946674252814	CCCATACAA
chr5	106637544	106637545	chr5:106637545:T:C	rs62380963	T	C	T	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr5	106681248	106681249	chr5:106681249:T:C	rs1437636	T	C	T	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr5	106923524	106923525	chr5:106923525:T:A	rs9327981	T	A	T	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr5	107228795	107228796	chr5:107228796:G:A	rs4957697	G	A	G	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr5	107229379	107229380	chr5:107229380:A:G	rs11242632	A	G	G	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr5	107263429	107263430	chr5:107263430:C:T	rs34562	C	T	C	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr5	107293919	107293920	chr5:107293920:A:G	rs253110	A	G	A	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr5	107337559	107337560	chr5:107337560:T:C	rs412541	T	C	T	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr5	107337589	107337590	chr5:107337590:C:T	chr5:107337590:C:T	C	T	C	Hoxd9.mouse_homeodomain_1	1	1	+	7.1462160923678635	5.831414178034855	GCCATAAAC
chr5	107437216	107437217	chr5:107437217:T:G	rs149498	T	G	G	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr5	107468216	107468217	chr5:107468217:T:C	rs151957	T	C	T	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr5	107565033	107565034	chr5:107565034:T:C	rs164849	T	C	T	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr5	107565074	107565075	chr5:107565075:G:A	rs73198650	G	A	G	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr5	107616214	107616215	chr5:107616215:C:T	rs142986167	C	T	C	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr5	107673758	107673759	chr5:107673759:T:C	rs115238716	T	C	T	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr5	107673896	107673897	chr5:107673897:A:C	rs112038350	A	C	A	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr5	107868585	107868586	chr5:107868586:C:G	rs55762588	C	G	C	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr5	107969070	107969071	chr5:107969071:G:C	rs117720934	G	C	G	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr5	108371406	108371407	chr5:108371407:C:G	rs6881879	C	G	C	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr5	108483388	108483389	chr5:108483389:C:T	rs4532353	C	T	T	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr5	108521966	108521967	chr5:108521967:G:C	rs58634108	G	C	G	Hoxd9.mouse_homeodomain_1	1	1	-	7.241935125048919	0.8324018962665533	CCCATACAA
chr5	108522149	108522150	chr5:108522150:C:T	rs10069821	C	T	T	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr5	108522184	108522185	chr5:108522185:C:T	rs77553422	C	T	C	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr5	108541921	108541922	chr5:108541922:G:A	rs61500204	G	A	G	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr5	108579351	108579352	chr5:108579352:T:C	rs116101870	T	C	T	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr5	108649972	108649973	chr5:108649973:A:G	rs7448313	A	G	G	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr5	108747639	108747640	chr5:108747640:G:A	rs915772405	G	A	G	Hoxd9.mouse_homeodomain_1	0	1	-	8.027213970992095	6.132666665683155	CACATAAAA
chr5	108983694	108983695	chr5:108983695:C:T	rs73778378	C	T	C	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr5	109038564	109038565	chr5:109038565:C:T	rs72790571	C	T	C	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr5	109081440	109081441	chr5:109081441:A:G	rs72796550	A	G	A	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr5	109133091	109133092	chr5:109133092:G:A	rs17450560	G	A	A	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr5	109417088	109417089	chr5:109417089:G:A	rs2963027	G	A	A	Hoxd9.mouse_homeodomain_1	1	1	-	8.287463081002919	6.972661166669912	CCAATAAAA
chr5	109777886	109777887	chr5:109777887:C:T	rs34595717	C	T	C	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr5	109777907	109777908	chr5:109777908:A:G	rs12514321	A	G	A	Hoxd9.mouse_homeodomain_1	4	1	-	8.287463081002919	5.632416436140341	CCAATAAAA
chr5	109786877	109786878	chr5:109786878:A:G	rs2269205	A	G	A	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr5	110256402	110256403	chr5:110256403:T:C	rs894429700	T	C	T	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr5	110496685	110496686	chr5:110496686:C:G	rs73784771	C	G	C	Hoxd9.mouse_homeodomain_1	1	1	+	7.889898683853121	1.480365455070757	ACCATAAAA
chr5	111584201	111584202	chr5:111584202:G:T	rs1551934	G	T	T	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr5	111637380	111637381	chr5:111637381:G:A	rs10478062	G	A	G	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr5	111721083	111721084	chr5:111721084:G:A	rs17842608	G	A	A	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr5	111742987	111742988	chr5:111742988:G:A	rs569507571	G	A	G	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr5	111942102	111942103	chr5:111942103:C:T	rs6882073	C	T	T	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr5	111977014	111977015	chr5:111977015:T:C	rs779898912	T	C	T	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr5	112167920	112167921	chr5:112167921:G:C	rs10070995	G	C	C	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr5	112183615	112183616	chr5:112183616:T:C	chr5:112183616:T:C	T	C	T	Hoxd9.mouse_homeodomain_1	7	1	-	7.091711387329735	0.38788544073800313	CCCATCAAA
chr5	112230825	112230826	chr5:112230826:C:T	rs4958019	C	T	C	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr5	112417645	112417646	chr5:112417646:G:C	rs712675	G	C	C	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr5	112708362	112708363	chr5:112708363:C:G	rs183966578	C	G	C	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr5	112849793	112849794	chr5:112849794:A:G	rs497844	A	G	A	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr5	112849815	112849816	chr5:112849816:A:C	rs566419	A	C	A	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr5	113050586	113050587	chr5:113050587:A:G	rs6893016	A	G	A	Hoxd9.mouse_homeodomain_1	6	1	+	7.716978748812629	1.0131528022208975	GACATAAAA
chr5	113058682	113058683	chr5:113058683:T:G	rs6879589	T	G	T	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr5	113093854	113093855	chr5:113093855:C:A	rs138279877	C	A	C	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr5	113114811	113114812	chr5:113114812:T:G	rs12188482	T	G	T	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr5	113256908	113256909	chr5:113256909:G:A	rs10519343	G	A	G	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr5	113401081	113401082	chr5:113401082:A:G	rs26961	A	G	G	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr5	113479701	113479702	chr5:113479702:C:T	rs444322	C	T	C	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr5	113795000	113795001	chr5:113795001:T:C	rs17135985	T	C	T	Hoxd9.mouse_homeodomain_1	7	1	-	8.678783717710262	1.9749577711185315	GCCATAAAA
chr5	113808846	113808847	chr5:113808847:T:C	rs4705474	T	C	T	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr5	113990042	113990043	chr5:113990043:C:G	rs296491	C	G	G	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr5	114175219	114175220	chr5:114175220:G:A	rs4076660	G	A	A	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr5	114309728	114309729	chr5:114309729:C:T	rs1379560	C	T	C	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr5	114378208	114378209	chr5:114378209:C:T	rs337697	C	T	C	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr5	115056561	115056562	chr5:115056562:A:G	rs4360034	A	G	A	Hoxd9.mouse_homeodomain_1	5	1	+	8.98901893988973	2.6148292216431743	CCCATAAAA
chr5	115302993	115302994	chr5:115302994:G:C	rs2085278	G	C	G	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr5	115321212	115321213	chr5:115321213:G:T	rs2963742	G	T	G	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr5	115399104	115399105	chr5:115399105:T:G	rs2416409	T	G	T	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr5	115637152	115637153	chr5:115637153:A:C	rs256949	A	C	C	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr5	115702459	115702460	chr5:115702460:A:C	rs12654183	A	C	c	Hoxd9.mouse_homeodomain_1	0	1	+	7.889898683853121	8.98901893988973	ACCATAAAA
chr5	115702481	115702482	chr5:115702482:C:A	rs12658303	C	A	C	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr5	115807586	115807587	chr5:115807587:G:A	rs35053218	G	A	G	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr5	115966368	115966369	chr5:115966369:A:C	rs6896619	A	C	A	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr5	116029136	116029137	chr5:116029137:G:A	rs2662446	G	A	A	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr5	116081168	116081169	chr5:116081169:A:C	rs2136211	A	C	C	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr5	116118654	116118655	chr5:116118655:G:T	rs763557259	G	T	G	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr5	116213099	116213100	chr5:116213100:T:C	rs66783056	T	C	T	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr5	116292336	116292337	chr5:116292337:T:C	rs112917070	T	C	T	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr5	116495633	116495634	chr5:116495634:A:G	rs2287686	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.409487817756228	7.075409217893736	CCCATTAAA
chr5	116498736	116498737	chr5:116498737:G:C	rs258015	G	C	G	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr5	116765906	116765907	chr5:116765907:T:G	rs2933644	T	G	T	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr5	116842731	116842732	chr5:116842732:G:A	rs12517201	G	A	G	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr5	117195246	117195247	chr5:117195247:C:T	rs116129025	C	T	C	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr5	117337597	117337598	chr5:117337598:T:C	rs4547957	T	C	T	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr5	117461517	117461518	chr5:117461518:T:C	rs112450477	T	C	T	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr5	117762703	117762704	chr5:117762704:C:T	rs7719154	C	T	C	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr5	118280088	118280089	chr5:118280089:T:A	chr5:118280089:T:A	T	A	T	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr5	118343040	118343041	chr5:118343041:G:A	rs4920888	G	A	A	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr5	118466420	118466421	chr5:118466421:T:C	rs6861574	T	C	T	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr5	118533969	118533970	chr5:118533970:A:C	rs10053323	A	C	A	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr5	118550203	118550204	chr5:118550204:A:C	rs7448528	A	C	A	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr5	118643557	118643558	chr5:118643558:T:C	rs2972707	T	C	T	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr5	119168551	119168552	chr5:119168552:A:T	rs80161591	A	T	A	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr5	119273536	119273537	chr5:119273537:G:A	rs79894500	G	A	G	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr5	119273556	119273557	chr5:119273557:C:T	rs115825945	C	T	c	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr5	119287349	119287350	chr5:119287350:A:G	rs6883353	A	G	A	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr5	119411884	119411885	chr5:119411885:C:A	rs78699083	C	A	C	Hoxd9.mouse_homeodomain_1	8	1	+	7.45645131454733	8.98901893988973	CCCATAAAC
chr5	119411892	119411893	chr5:119411893:T:C	rs17145372	T	C	T	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr5	119537801	119537802	chr5:119537802:T:G	rs183800147	T	G	T	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr5	119706245	119706246	chr5:119706246:C:A	rs1968231	C	A	C	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr5	119751428	119751429	chr5:119751429:G:A	rs116751433	G	A	G	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr5	120293577	120293578	chr5:120293578:G:C	rs4505982	G	C	G	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr5	120320108	120320109	chr5:120320109:T:C	rs2116609	T	C	C	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr5	120534067	120534068	chr5:120534068:G:A	rs300974	G	A	A	Hoxd9.mouse_homeodomain_1	2	1	-	7.075409217893736	0.5879687602700975	CCCGTTAAA
chr5	121053176	121053177	chr5:121053177:C:T	rs4623176	C	T	T	Hoxd9.mouse_homeodomain_1	2	1	+	7.716978748812629	1.2295382911889927	GACATAAAA
chr5	121377674	121377675	chr5:121377675:G:A	rs700604	G	A	G	Hoxd9.mouse_homeodomain_1	1	1	-	7.9772278588234515	6.662425944490444	GCAATAAAA
chr5	121597342	121597343	chr5:121597343:G:A	rs57281165	G	A	C	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr5	121597399	121597400	chr5:121597400:C:G	rs10059114	C	G	C	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr5	121919244	121919245	chr5:121919245:G:A	rs12659892	G	A	G	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr5	122028214	122028215	chr5:122028215:T:C	rs17352041	T	C	T	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr5	122078738	122078739	chr5:122078739:T:A	rs3763024	T	A	A	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr5	122164158	122164159	chr5:122164159:T:C	rs145526122	T	C	T	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr5	122183712	122183713	chr5:122183713:C:A	rs7725969	C	A	C	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr5	122420258	122420259	chr5:122420259:G:A	rs304388	G	A	G	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr5	122760020	122760021	chr5:122760021:C:T	rs116004400	C	T	C	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr5	122761390	122761391	chr5:122761391:C:G	rs6889176	C	G	G	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr5	122934023	122934024	chr5:122934024:A:C	rs246309	A	C	C	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr5	123283704	123283705	chr5:123283705:G:T	rs151279543	G	T	G	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr5	123359336	123359337	chr5:123359337:A:G	rs11241690	A	G	A	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr5	123488983	123488984	chr5:123488984:A:G	rs1500187	A	G	A	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr5	123803356	123803357	chr5:123803357:A:G	rs10059555	A	G	A	Hoxd9.mouse_homeodomain_1	8	1	+	8.027213970992095	6.560886862506841	CACATAAAA
chr5	124037085	124037086	chr5:124037086:C:T	rs11960808	C	T	C	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr5	124259449	124259450	chr5:124259450:A:G	rs79796659	A	G	A	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr5	124371981	124371982	chr5:124371982:C:A	rs2220399	C	A	C	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr5	124399169	124399170	chr5:124399170:G:C	rs468957	G	C	A	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr5	124431129	124431130	chr5:124431130:G:T	rs588441	G	T	G	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr5	124480395	124480396	chr5:124480396:T:C	rs4457071	T	C	T	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr5	124527440	124527441	chr5:124527441:T:C	rs6870395	T	C	C	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr5	124527450	124527451	chr5:124527451:T:A	rs115653854	T	A	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.9772278588234515	5.973746722014807	GCAATAAAA
chr5	124538523	124538524	chr5:124538524:G:A	rs77818827	G	A	G	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr5	124551006	124551007	chr5:124551007:T:A	rs76928937	T	A	T	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr5	124606317	124606318	chr5:124606318:A:G	rs12110019	A	G	G	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr5	124629414	124629415	chr5:124629415:A:G	rs75517887	A	G	A	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr5	124704867	124704868	chr5:124704868:T:C	rs4376260	T	C	T	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr5	124839479	124839480	chr5:124839480:A:G	rs75439582	A	G	A	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr5	124919441	124919442	chr5:124919442:T:A	rs6898265	T	A	T	Hoxd9.mouse_homeodomain_1	7	1	-	7.716978748812629	5.969894933971817	GACATAAAA
chr5	124963982	124963983	chr5:124963983:A:G	rs9968605	A	G	G	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr5	124997073	124997074	chr5:124997074:A:G	rs75516693	A	G	A	Hoxd9.mouse_homeodomain_1	4	1	-	7.716978748812629	5.061932103950051	GACATAAAA
chr5	125012375	125012376	chr5:125012376:G:A	rs12516382	G	A	G	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr5	125012539	125012540	chr5:125012540:G:A	rs6865793	G	A	A	Hoxd9.mouse_homeodomain_1	0	1	+	8.678783717710262	7.889898683853121	GCCATAAAA
chr5	125148876	125148877	chr5:125148877:C:A	rs12520570	C	A	C	Hoxd9.mouse_homeodomain_1	0	1	-	7.716978748812629	6.132666665683155	GACATAAAA
chr5	125209838	125209839	chr5:125209839:A:G	rs1439570	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	7.9772278588234515	6.643149258960959	GCAATAAAA
chr5	125209854	125209855	chr5:125209855:T:A	rs1439569	T	A	T	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr5	125278199	125278200	chr5:125278200:G:A	rs12521045	G	A	G	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr5	125310847	125310848	chr5:125310848:A:G	rs62373353	A	G	A	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr5	125339037	125339038	chr5:125339038:G:A	rs2197406	G	A	A	Hoxd9.mouse_homeodomain_1	2	1	-	8.027213970992095	1.5397735133684596	CACATAAAA
chr5	125389857	125389858	chr5:125389858:T:C	rs72782955	T	C	T	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr5	125389859	125389860	chr5:125389860:C:G	rs72782957	C	G	C	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr5	125447235	125447236	chr5:125447236:A:G	rs4836192	A	G	G	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr5	125447254	125447255	chr5:125447255:T:C	rs1293116273	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.9772278588234515	6.643149258960959	GCAATAAAA
chr5	125527442	125527443	chr5:125527443:G:A	rs190612110	G	A	G	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr5	125698363	125698364	chr5:125698364:A:T	rs34407148	A	T	A	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr5	125720319	125720320	chr5:125720320:G:A	rs7707480	G	A	A	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr5	125748401	125748402	chr5:125748402:G:A	rs74389396	G	A	G	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr5	125873578	125873579	chr5:125873579:C:A	rs56975956	C	A	C	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr5	125873584	125873585	chr5:125873585:G:A	rs7444039	G	A	G	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr5	125874316	125874317	chr5:125874317:A:G	rs10076439	A	G	A	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr5	125966285	125966286	chr5:125966286:C:T	rs34028	C	T	C	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr5	126349241	126349242	chr5:126349242:T:A	rs28712275	T	A	A	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr5	126422987	126422988	chr5:126422988:T:C	rs112566060	T	C	T	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr5	126528028	126528029	chr5:126528029:A:C	rs10053600	A	C	C	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr5	126735950	126735951	chr5:126735951:T:C	rs7446941	T	C	C	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr5	126741498	126741499	chr5:126741499:G:A	rs76594536	G	A	G	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr5	126855471	126855472	chr5:126855472:C:T	rs28583988	C	T	C	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr5	126869002	126869003	chr5:126869003:T:G	rs552342905	T	G	T	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr5	126882289	126882290	chr5:126882290:G:A	rs112341573	G	A	G	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr5	126912761	126912762	chr5:126912762:T:G	rs140271859	T	G	T	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr5	126971917	126971918	chr5:126971918:C:T	rs4836307	C	T	T	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr5	126999170	126999171	chr5:126999171:T:C	rs729607	T	C	C	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr5	127052472	127052473	chr5:127052473:C:A	rs73783518	C	A	C	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr5	127177259	127177260	chr5:127177260:G:C	rs108558	G	C	G	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr5	127305603	127305604	chr5:127305604:G:A	rs2585194	G	A	G	Hoxd9.mouse_homeodomain_1	0	1	+	8.099252595576761	7.3103675617196195	GCCATTAAA
chr5	127312375	127312376	chr5:127312376:G:A	rs189339682	G	A	G	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr5	127413725	127413726	chr5:127413726:G:C	rs115846425	G	C	G	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr5	127493612	127493613	chr5:127493613:C:T	rs78081035	C	T	C	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr5	127622198	127622199	chr5:127622199:C:T	rs6595781	C	T	C	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr5	127909902	127909903	chr5:127909903:C:T	rs17839667	C	T	C	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr5	127910539	127910540	chr5:127910540:G:A	rs245157	G	A	A	Hoxd9.mouse_homeodomain_1	0	1	+	7.1462160923678635	6.357331058510722	GCCATAAAC
chr5	127910540	127910541	chr5:127910541:C:A	rs58316019	C	A	C	Hoxd9.mouse_homeodomain_1	1	1	+	7.1462160923678635	6.184411123470229	GCCATAAAC
chr5	127935406	127935407	chr5:127935407:G:A	rs17674887	G	A	G	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr5	127960033	127960034	chr5:127960034:C:T	rs28591675	C	T	T	Hoxd9.mouse_homeodomain_1	2	1	+	7.075409217893736	0.5879687602700975	CCCGTTAAA
chr5	128346491	128346492	chr5:128346492:G:A	rs11746746	G	A	G	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr5	128358742	128358743	chr5:128358743:A:C	rs42281	A	C	A	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr5	128466544	128466545	chr5:128466545:C:T	rs35396041	C	T	C	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr5	128471116	128471117	chr5:128471117:G:C	rs115579840	G	C	G	Hoxd9.mouse_homeodomain_1	1	1	-	7.241935125048919	0.8324018962665533	CCCATACAA
chr5	128857059	128857060	chr5:128857060:A:G	rs1363463	A	G	A	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr5	128950470	128950471	chr5:128950471:C:T	rs2526210	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	-	7.212456609225008	6.423571575367866	GCCATAAAG
chr5	128950474	128950475	chr5:128950475:A:T	rs2577556	A	T	T	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr5	128950528	128950529	chr5:128950529:C:T	rs2526211	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	-	8.678783717710262	7.889898683853121	GCCATAAAA
chr5	129041730	129041731	chr5:129041731:G:A	rs1181963	G	A	A	Hoxd9.mouse_homeodomain_1	3	1	+	7.654940340027237	8.98901893988973	CCCGTAAAA
chr5	129188270	129188271	chr5:129188271:G:A	rs74920455	G	A	G	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr5	130541778	130541779	chr5:130541779:G:A	rs10074110	G	A	G	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr5	131265506	131265507	chr5:131265507:G:C	rs10478979	G	C	G	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr5	131280870	131280871	chr5:131280871:G:A	rs114469565	G	A	G	Hoxd9.mouse_homeodomain_1	2	1	-	8.027213970992095	1.5397735133684596	CACATAAAA
chr5	131384389	131384390	chr5:131384390:G:A	rs112087595	G	A	g	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr5	131656738	131656739	chr5:131656739:T:C	rs31583	T	C	A	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr5	131751702	131751703	chr5:131751703:T:C	rs115921850	T	C	t	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr5	132024138	132024139	chr5:132024139:A:T	rs147937641	A	T	A	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr5	132228942	132228943	chr5:132228943:C:T	rs112688207	C	T	C	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr5	132491498	132491499	chr5:132491499:T:C	rs2549005	T	C	C	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr5	132491499	132491500	chr5:132491500:A:G	rs1385304962	A	G	A	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr5	132510506	132510507	chr5:132510507:A:T	rs6596082	A	T	A	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr5	132840284	132840285	chr5:132840285:T:G	chr5:132840285:T:G	T	G	T	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr5	132955218	132955219	chr5:132955219:T:C	rs72799496	T	C	N	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr5	133041420	133041421	chr5:133041421:G:A	rs11950367	G	A	G	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr5	133114766	133114767	chr5:133114767:G:A	rs73256406	G	A	G	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr5	133155869	133155870	chr5:133155870:A:G	rs7717377	A	G	A	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr5	133371997	133371998	chr5:133371998:G:A	rs62375990	G	A	G	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr5	133372597	133372598	chr5:133372598:G:C	rs28222	G	C	C	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr5	133701767	133701768	chr5:133701768:C:T	rs720770	C	T	T	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr5	133753474	133753475	chr5:133753475:T:C	rs917289	T	C	T	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr5	133993133	133993134	chr5:133993134:T:C	rs6893145	T	C	T	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr5	135143883	135143884	chr5:135143884:C:T	rs7709326	C	T	T	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr5	135174612	135174613	chr5:135174613:G:A	rs9327705	G	A	G	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr5	135215840	135215841	chr5:135215841:C:T	rs115836571	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	-	7.716978748812629	6.928093714955487	GACATAAAA
chr5	135219764	135219765	chr5:135219765:C:A	rs2059778	C	A	C	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr5	135271941	135271942	chr5:135271942:C:T	rs79413851	C	T	C	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr5	135314352	135314353	chr5:135314353:G:A	rs763834720	G	A	G	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr5	135489610	135489611	chr5:135489611:C:A	rs1447062269	C	A	C	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr5	135626757	135626758	chr5:135626758:C:G	rs184303323	C	G	C	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr5	135629049	135629050	chr5:135629050:C:T	rs113941996	C	T	C	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr5	135629061	135629062	chr5:135629062:A:C	chr5:135629062:A:C	A	C	A	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr5	135743839	135743840	chr5:135743840:T:C	rs73789118	T	C	T	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr5	135812998	135812999	chr5:135812999:C:G	rs4976461	C	G	C	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr5	135849875	135849876	chr5:135849876:A:G	rs6870487	A	G	G	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr5	135849879	135849880	chr5:135849880:A:G	rs6870496	A	G	G	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr5	135890447	135890448	chr5:135890448:C:T	rs11741137	C	T	C	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr5	135991801	135991802	chr5:135991802:T:C	rs1859295	T	C	T	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr5	135991809	135991810	chr5:135991810:G:T	rs74799850	G	T	G	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr5	135998059	135998060	chr5:135998060:A:G	rs30745	A	G	A	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr5	136235298	136235299	chr5:136235299:T:G	rs7731706	T	G	T	Hoxd9.mouse_homeodomain_1	6	1	-	7.889898683853121	6.1428148690123106	ACCATAAAA
chr5	136376168	136376169	chr5:136376169:G:A	rs57224055	G	A	G	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr5	136458151	136458152	chr5:136458152:A:G	rs890064347	A	G	A	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr5	136458162	136458163	chr5:136458163:A:G	rs76317867	A	G	A	Hoxd9.mouse_homeodomain_1	4	1	-	8.409487817756228	5.7544411728936495	CCCATTAAA
chr5	137293741	137293742	chr5:137293742:C:A	rs2905551	C	A	C	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr5	137306261	137306262	chr5:137306262:A:G	rs28811611	A	G	A	Hoxd9.mouse_homeodomain_1	1	1	+	8.027213970992095	2.5794857111073646	CACATAAAA
chr5	137306286	137306287	chr5:137306287:T:G	rs187054802	T	G	T	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr5	137319579	137319580	chr5:137319580:T:G	rs192442398	T	G	G	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr5	137481469	137481470	chr5:137481470:G:A	rs1108547	G	A	G	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr5	137632828	137632829	chr5:137632829:T:C	rs6888338	T	C	T	Hoxd9.mouse_homeodomain_1	4	1	+	8.409487817756228	5.7544411728936495	CCCATTAAA
chr5	137734500	137734501	chr5:137734501:C:T	rs138568679	C	T	C	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr5	137796363	137796364	chr5:137796364:G:A	rs56265335	G	A	G	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr5	137944231	137944232	chr5:137944232:G:A	rs13359605	G	A	G	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr5	138028606	138028607	chr5:138028607:G:C	rs2349963	G	C	G	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr5	138633341	138633342	chr5:138633342:G:A	rs1482416699	G	A	G	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr5	138759516	138759517	chr5:138759517:A:G	rs1095374	A	G	a	Hoxd9.mouse_homeodomain_1	3	1	+	8.409487817756228	7.075409217893736	CCCATTAAA
chr5	138870147	138870148	chr5:138870148:A:G	rs1365102951	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	7.091711387329735	5.757632787467242	CCCATCAAA
chr5	138891077	138891078	chr5:138891078:T:C	rs176382	T	C	C	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr5	138933458	138933459	chr5:138933459:G:A	rs11954103	G	A	G	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr5	139451353	139451354	chr5:139451354:T:G	rs372781620	T	G	T	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr5	139687512	139687513	chr5:139687513:G:A	rs13436896	G	A	A	Hoxd9.mouse_homeodomain_1	0	1	-	8.287463081002919	6.392915775693977	CCAATAAAA
chr5	139752928	139752929	chr5:139752929:A:C	rs260717	A	C	C	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr5	139752935	139752936	chr5:139752936:C:G	rs11954344	C	G	C	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr5	140174651	140174652	chr5:140174652:A:G	chr5:140174652:A:G	A	G	A	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr5	140174662	140174663	chr5:140174663:C:G	rs541838092	C	G	C	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr5	140245638	140245639	chr5:140245639:G:A	rs11558407	G	A	G	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr5	140261596	140261597	chr5:140261597:G:A	rs182432118	G	A	G	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr5	140401509	140401510	chr5:140401510:A:C	rs17286683	A	C	A	Hoxd9.mouse_homeodomain_1	4	1	-	7.212456609225008	0.3706381618944015	GCCATAAAG
chr5	140401528	140401529	chr5:140401529:C:T	rs117186414	C	T	C	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr5	140644232	140644233	chr5:140644233:C:T	rs753279	C	T	C	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr5	140700413	140700414	chr5:140700414:C:A	chr5:140700414:C:A	C	A	C	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr5	140785982	140785983	chr5:140785983:T:C	rs12055222	T	C	C	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr5	140868953	140868954	chr5:140868954:C:T	rs192231	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	+	7.241935125048919	5.347387819739977	CCCATACAA
chr5	141403509	141403510	chr5:141403510:C:T	rs201146573	C	T	c	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr5	141527138	141527139	chr5:141527139:G:C	rs122752	G	C	G	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr5	141642148	141642149	chr5:141642149:A:T	rs6580193	A	T	A	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr5	141642162	141642163	chr5:141642163:A:C	rs1337806185	A	C	A	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr5	141853803	141853804	chr5:141853804:A:C	rs10213790	A	C	C	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr5	141882269	141882270	chr5:141882270:C:T	rs56390916	C	T	C	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr5	141897770	141897771	chr5:141897771:G:T	rs73274326	G	T	T	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr5	141914156	141914157	chr5:141914157:T:G	rs114236071	T	G	T	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr5	142016356	142016357	chr5:142016357:G:A	rs61586772	G	A	G	Hoxd9.mouse_homeodomain_1	3	1	+	7.34470511784777	8.678783717710262	GCCGTAAAA
chr5	142104559	142104560	chr5:142104560:C:G	rs13172358	C	G	C	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr5	142106461	142106462	chr5:142106462:G:T	rs4912803	G	T	G	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr5	142197017	142197018	chr5:142197018:C:T	rs77729784	C	T	C	Hoxd9.mouse_homeodomain_1	8	1	+	7.45645131454733	6.056505815123662	CCCATAAAC
chr5	142301737	142301738	chr5:142301738:G:A	rs73282682	G	A	G	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr5	142320617	142320618	chr5:142320618:G:C	rs72802002	G	C	G	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr5	142429157	142429158	chr5:142429158:G:A	rs530916591	G	A	G	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr5	142495524	142495525	chr5:142495525:G:A	rs10044755	G	A	a	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr5	142598030	142598031	chr5:142598031:A:G	rs17217478	A	G	A	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr5	142628026	142628027	chr5:142628027:G:A	rs80324917	G	A	G	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr5	142931333	142931334	chr5:142931334:C:T	rs37185	C	T	T	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr5	142937658	142937659	chr5:142937659:G:A	rs37223	G	A	G	Hoxd9.mouse_homeodomain_1	1	1	-	8.409487817756228	7.094685903423221	CCCATTAAA
chr5	143128894	143128895	chr5:143128895:G:A	rs3776297	G	A	A	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr5	143175092	143175093	chr5:143175093:A:G	rs258758	A	G	A	Hoxd9.mouse_homeodomain_1	5	1	+	8.027213970992095	1.6530242527455408	CACATAAAA
chr5	143184347	143184348	chr5:143184348:G:T	rs3836770	G	T	T	Hoxd9.mouse_homeodomain_1	3	1	+	7.654940340027237	6.985537803081085	CCCGTAAAA
chr5	143192584	143192585	chr5:143192585:C:T	rs12186402	C	T	C	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr5	143341027	143341028	chr5:143341028:A:G	rs72801072	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.287463081002919	6.953384481140425	CCAATAAAA
chr5	143397118	143397119	chr5:143397119:T:C	rs10041520	T	C	T	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr5	143402001	143402002	chr5:143402002:C:T	rs10482616	C	T	C	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr5	143637272	143637273	chr5:143637273:G:A	rs35934308	G	A	G	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr5	143637314	143637315	chr5:143637315:G:C	rs35449840	G	C	G	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr5	143645946	143645947	chr5:143645947:T:A	rs10068655	T	A	A	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr5	143788072	143788073	chr5:143788073:G:T	rs11954540	G	T	G	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr5	143800895	143800896	chr5:143800896:T:C	rs2112733	T	C	T	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr5	143987190	143987191	chr5:143987191:G:T	rs312615	G	T	G	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr5	144188140	144188141	chr5:144188141:T:C	rs144604487	T	C	T	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr5	144208288	144208289	chr5:144208289:G:A	rs146717397	G	A	G	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr5	144329529	144329530	chr5:144329530:A:G	rs40267	A	G	A	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr5	145226793	145226794	chr5:145226794:T:C	rs959237	T	C	T	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr5	145510346	145510347	chr5:145510347:A:G	rs34970219	A	G	G	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr5	145636654	145636655	chr5:145636655:A:T	rs2195939	A	T	a	Hoxd9.mouse_homeodomain_1	7	1	+	8.099252595576761	6.3521687807359495	GCCATTAAA
chr5	145661644	145661645	chr5:145661645:C:T	rs563903993	C	T	C	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr5	145678491	145678492	chr5:145678492:A:G	rs17479816	A	G	A	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr5	145807548	145807549	chr5:145807549:A:C	rs7704574	A	C	A	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr5	145926224	145926225	chr5:145926225:G:A	rs73310116	G	A	G	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr5	145984120	145984121	chr5:145984121:A:G	rs1076334	A	G	A	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr5	146020317	146020318	chr5:146020318:G:A	rs11739577	G	A	A	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr5	146331284	146331285	chr5:146331285:C:T	rs1201598	C	T	C	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr5	146428785	146428786	chr5:146428786:G:A	rs10477300	G	A	G	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr5	146447102	146447103	chr5:146447103:T:A	rs573528292	T	A	T	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr5	146451008	146451009	chr5:146451009:C:T	rs78173774	C	T	C	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr5	146460953	146460954	chr5:146460954:G:A	rs9791020	G	A	G	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr5	146466331	146466332	chr5:146466332:G:A	rs7702433	G	A	G	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr5	146565679	146565680	chr5:146565680:G:C	rs113051804	G	C	G	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr5	146725324	146725325	chr5:146725325:G:A	rs114362206	G	A	G	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr5	147431681	147431682	chr5:147431682:G:A	rs56171142	G	A	G	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr5	147472861	147472862	chr5:147472862:T:C	rs145679263	T	C	T	Hoxd9.mouse_homeodomain_1	7	1	-	7.1462160923678635	0.44239014577613167	GCCATAAAC
chr5	147578526	147578527	chr5:147578527:G:A	rs74481612	G	A	G	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr5	147813985	147813986	chr5:147813986:T:A	rs7704640	T	A	G	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr5	148131212	148131213	chr5:148131213:T:C	rs6895434	T	C	C	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr5	148522322	148522323	chr5:148522323:C:T	rs1432915	C	T	C	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr5	148795483	148795484	chr5:148795484:A:G	rs9325117	A	G	A	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr5	148824198	148824199	chr5:148824199:T:C	rs1432622	T	C	C	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr5	148874293	148874294	chr5:148874294:G:C	rs1036175	G	C	G	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr5	148874327	148874328	chr5:148874328:C:T	rs1036176	C	T	C	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr5	148955482	148955483	chr5:148955483:C:T	rs79080310	C	T	C	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr5	148965500	148965501	chr5:148965501:C:T	rs34916792	C	T	C	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr5	148973426	148973427	chr5:148973427:C:T	rs10045726	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	-	7.716978748812629	6.928093714955487	GACATAAAA
chr5	148974720	148974721	chr5:148974721:C:T	rs569572727	C	T	C	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr5	148977273	148977274	chr5:148977274:C:A	rs75874264	C	A	C	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr5	148998200	148998201	chr5:148998201:C:T	rs116056843	C	T	C	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr5	149062572	149062573	chr5:149062573:G:A	rs74441961	G	A	G	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr5	149395420	149395421	chr5:149395421:C:T	rs10070761	C	T	C	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr5	149464992	149464993	chr5:149464993:T:C	chr5:149464993:T:C	T	C	C	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr5	149489689	149489690	chr5:149489690:A:T	rs10045382	A	T	A	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr5	149549781	149549782	chr5:149549782:A:G	rs1276553076	A	G	A	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr5	149641641	149641642	chr5:149641642:A:T	rs531870902	A	T	T	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr5	149671925	149671926	chr5:149671926:G:A	rs12658991	G	A	G	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr5	149702528	149702529	chr5:149702529:G:A	rs2340623	G	A	.	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr5	149835904	149835905	chr5:149835905:G:T	rs62382346	G	T	G	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr5	149956875	149956876	chr5:149956876:G:A	rs9324634	G	A	G	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr5	149956942	149956943	chr5:149956943:T:C	rs245058	T	C	C	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr5	150071762	150071763	chr5:150071763:G:A	rs3776074	G	A	A	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr5	150216018	150216019	chr5:150216019:C:T	rs73796372	C	T	C	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr5	150482392	150482393	chr5:150482393:G:A	rs4958584	G	A	G	Hoxd9.mouse_homeodomain_1	3	1	+	7.654940340027237	8.98901893988973	CCCGTAAAA
chr5	150517702	150517703	chr5:150517703:C:T	rs1016408052	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	-	7.716978748812629	6.928093714955487	GACATAAAA
chr5	150567740	150567741	chr5:150567741:C:T	rs116802586	C	T	C	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr5	150635454	150635455	chr5:150635455:A:G	rs13180435	A	G	G	Hoxd9.mouse_homeodomain_1	7	1	+	8.099252595576761	1.3954266489850298	GCCATTAAA
chr5	150656268	150656269	chr5:150656269:G:C	chr5:150656269:G:C	G	C	G	Hoxd9.mouse_homeodomain_1	1	1	-	7.9772278588234515	1.5676946300410868	GCAATAAAA
chr5	150847269	150847270	chr5:150847270:G:T	chr5:150847270:G:T	G	T	G	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr5	150847279	150847280	chr5:150847280:T:C	rs10052068	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.716978748812629	6.382900148950135	GACATAAAA
chr5	151049184	151049185	chr5:151049185:G:A	rs72790117	G	A	G	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr5	151070411	151070412	chr5:151070412:T:C	rs60500836	T	C	C	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr5	151080485	151080486	chr5:151080486:C:T	rs7719549	C	T	C	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr5	151081537	151081538	chr5:151081538:C:G	chr5:151081538:C:G	C	G	C	Hoxd9.mouse_homeodomain_1	1	1	+	7.522691831404475	1.1131586026221094	CCCATAAAG
chr5	151081559	151081560	chr5:151081560:A:G	rs187753002	A	G	A	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr5	151202932	151202933	chr5:151202933:A:G	rs34182166	A	G	A	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr5	151239332	151239333	chr5:151239333:C:T	rs190646000	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	+	8.027213970992095	6.132666665683155	CACATAAAA
chr5	151271567	151271568	chr5:151271568:A:T	rs153447	A	T	A	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr5	151382715	151382716	chr5:151382716:A:G	rs7729216	A	G	N	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr5	151426728	151426729	chr5:151426729:G:A	rs112867002	G	A	G	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr5	151523830	151523831	chr5:151523831:C:T	rs6879158	C	T	C	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr5	152220522	152220523	chr5:152220523:T:C	rs76196342	T	C	C	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr5	152380863	152380864	chr5:152380864:C:T	rs888877	C	T	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.654940340027237	8.98901893988973	CCCGTAAAA
chr5	152500350	152500351	chr5:152500351:A:G	rs17451303	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.027213970992095	6.693135371129603	CACATAAAA
chr5	152632946	152632947	chr5:152632947:T:C	rs72797254	T	C	T	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr5	152925725	152925726	chr5:152925726:A:G	rs74617816	A	G	A	Hoxd9.mouse_homeodomain_1	6	1	+	7.1462160923678635	0.44239014577613167	GCCATAAAC
chr5	153045576	153045577	chr5:153045577:G:A	rs73284294	G	A	G	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr5	153133452	153133453	chr5:153133453:T:C	rs10044958	T	C	C	Hoxd9.mouse_homeodomain_1	5	1	-	7.889898683853121	1.5157089656065659	ACCATAAAA
chr5	153159950	153159951	chr5:153159951:T:C	rs4958616	T	C	T	Hoxd9.mouse_homeodomain_1	4	1	+	7.45645131454733	4.801404669684752	CCCATAAAC
chr5	153636889	153636890	chr5:153636890:G:A	rs11741455	G	A	G	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr5	153636890	153636891	chr5:153636891:G:A	rs11741456	G	A	G	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr5	153652659	153652660	chr5:153652660:G:T	rs78917897	G	T	G	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr5	153690831	153690832	chr5:153690832:C:T	rs13189947	C	T	C	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr5	153823321	153823322	chr5:153823322:G:A	rs2964011	G	A	A	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr5	153903401	153903402	chr5:153903402:T:C	rs1461243	T	C	T	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr5	154001719	154001720	chr5:154001720:A:G	rs9324762	A	G	G	Hoxd9.mouse_homeodomain_1	6	1	+	7.9772278588234515	1.2734019122317202	GCAATAAAA
chr5	154162457	154162458	chr5:154162458:C:G	chr5:154162458:C:G	C	G	C	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr5	154203859	154203860	chr5:154203860:G:A	rs4958362	G	A	A	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr5	154342436	154342437	chr5:154342437:G:A	rs73283313	G	A	G	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr5	154447074	154447075	chr5:154447075:T:C	rs75854906	T	C	T	Hoxd9.mouse_homeodomain_1	2	1	-	8.287463081002919	5.5210272824374	CCAATAAAA
chr5	154540103	154540104	chr5:154540104:G:A	rs6580087	G	A	A	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr5	154541604	154541605	chr5:154541605:T:C	rs11748225	T	C	T	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr5	155089111	155089112	chr5:155089112:T:C	rs66691937	T	C	t	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr5	155366192	155366193	chr5:155366193:T:A	rs1835103	T	A	T	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr5	155727583	155727584	chr5:155727584:C:T	rs62382286	C	T	C	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr5	156201560	156201561	chr5:156201561:T:G	rs11747910	T	G	G	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr5	156220227	156220228	chr5:156220228:C:A	rs17053349	C	A	C	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr5	156327645	156327646	chr5:156327646:T:C	rs114305010	T	C	T	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr5	156589735	156589736	chr5:156589736:T:C	rs72801155	T	C	T	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr5	156595925	156595926	chr5:156595926:T:C	rs888842	T	C	C	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr5	156681431	156681432	chr5:156681432:C:G	rs79682097	C	G	C	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr5	157050819	157050820	chr5:157050820:G:A	rs17573010	G	A	G	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr5	157100574	157100575	chr5:157100575:C:T	rs143079649	C	T	c	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr5	157137811	157137812	chr5:157137812:C:A	rs10077217	C	A	C	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr5	157152439	157152440	chr5:157152440:A:G	rs365782	A	G	G	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr5	157208332	157208333	chr5:157208333:G:C	rs11742812	G	C	G	Hoxd9.mouse_homeodomain_1	1	1	-	7.091711387329735	0.6821781585473693	CCCATCAAA
chr5	157535060	157535061	chr5:157535061:T:A	rs10077652	T	A	A	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr5	157541596	157541597	chr5:157541597:G:A	rs10067579	G	A	g	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr5	157561425	157561426	chr5:157561426:C:T	rs115229597	C	T	C	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr5	157699079	157699080	chr5:157699080:G:C	rs2418852	G	C	g	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr5	157878185	157878186	chr5:157878186:T:C	rs2569122	T	C	T	Hoxd9.mouse_homeodomain_1	7	1	-	8.027213970992095	1.3233880244003648	CACATAAAA
chr5	158194775	158194776	chr5:158194776:A:T	rs12658799	A	T	A	Hoxd9.mouse_homeodomain_1	5	1	+	7.241935125048919	6.662404002915416	CCCATACAA
chr5	158483343	158483344	chr5:158483344:G:A	rs147937175	G	A	G	Hoxd9.mouse_homeodomain_1	2	1	-	8.678783717710262	2.1913432600866263	GCCATAAAA
chr5	158493154	158493155	chr5:158493155:A:T	rs2946170	A	T	T	Hoxd9.mouse_homeodomain_1	4	1	-	8.287463081002919	1.445644633672313	CCAATAAAA
chr5	158675266	158675267	chr5:158675267:C:G	rs33196	C	G	C	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr5	158786472	158786473	chr5:158786473:G:A	rs113670291	G	A	G	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr5	158797546	158797547	chr5:158797547:G:A	rs140265222	G	A	G	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr5	159916158	159916159	chr5:159916159:C:A	rs139748609	C	A	C	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr5	160083432	160083433	chr5:160083433:T:C	rs115577968	T	C	T	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr5	160119756	160119757	chr5:160119757:A:G	rs900613099	A	G	A	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr5	160363188	160363189	chr5:160363189:A:G	rs79799031	A	G	A	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr5	160364131	160364132	chr5:160364132:A:C	rs1105787	A	C	A	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr5	160524337	160524338	chr5:160524338:T:C	rs76852635	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.889898683853121	6.555820083990628	ACCATAAAA
chr5	160524340	160524341	chr5:160524341:T:C	rs143535316	T	C	T	Hoxd9.mouse_homeodomain_1	0	1	-	7.889898683853121	8.678783717710262	ACCATAAAA
chr5	160971534	160971535	chr5:160971535:C:T	rs1356281	C	T	T	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr5	161272081	161272082	chr5:161272082:T:C	rs633881	T	C	C	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr5	161410724	161410725	chr5:161410725:A:G	rs17059436	A	G	A	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr5	161563027	161563028	chr5:161563028:A:C	rs75671783	A	C	A	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr5	161847799	161847800	chr5:161847800:A:C	rs35070708	A	C	A	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr5	162236600	162236601	chr5:162236601:C:A	rs72803325	C	A	c	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr5	162571223	162571224	chr5:162571224:G:A	rs1872274	G	A	G	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr5	162603463	162603464	chr5:162603464:G:A	rs62399279	G	A	G	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr5	162882973	162882974	chr5:162882974:C:T	rs111876643	C	T	C	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr5	163128551	163128552	chr5:163128552:T:A	rs17052654	T	A	A	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr5	163346541	163346542	chr5:163346542:A:G	rs1421840	A	G	A	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr5	163372988	163372989	chr5:163372989:T:C	rs4869059	T	C	C	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr5	163479036	163479037	chr5:163479037:T:C	rs299292	T	C	C	Hoxd9.mouse_homeodomain_1	1	1	-	8.027213970992095	2.5794857111073646	CACATAAAA
chr5	163489406	163489407	chr5:163489407:C:T	rs11748030	C	T	C	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr5	163489421	163489422	chr5:163489422:A:G	rs299316	A	G	A	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr5	163503950	163503951	chr5:163503951:A:G	rs147551894	A	G	A	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr5	163622738	163622739	chr5:163622739:C:G	rs566268414	C	G	C	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr5	163846624	163846625	chr5:163846625:A:G	rs6881878	A	G	A	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr5	163862234	163862235	chr5:163862235:C:G	rs10043091	C	G	G	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr5	163866711	163866712	chr5:163866712:C:T	rs10060656	C	T	C	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr5	163918041	163918042	chr5:163918042:G:A	rs2544976	G	A	G	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr5	163918063	163918064	chr5:163918064:G:C	rs10711707	G	C	G	Hoxd9.mouse_homeodomain_1	2	1	-	8.98901893988973	5.5210272824374	CCCATAAAA
chr5	163918076	163918077	chr5:163918077:A:T	rs2546319	A	T	A	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr5	164009510	164009511	chr5:164009511:T:A	rs73326293	T	A	A	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr5	164161438	164161439	chr5:164161439:C:T	rs7710986	C	T	C	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr5	164572409	164572410	chr5:164572410:C:G	rs17074144	C	G	C	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr5	164880346	164880347	chr5:164880347:G:A	rs11746351	G	A	A	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr5	165030431	165030432	chr5:165030432:A:T	rs4327610	A	T	T	Hoxd9.mouse_homeodomain_1	4	1	-	7.716978748812629	0.875160301482023	GACATAAAA
chr5	165111900	165111901	chr5:165111901:C:T	rs56400667	C	T	c	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr5	165680482	165680483	chr5:165680483:G:A	rs80224832	G	A	G	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr5	165681192	165681193	chr5:165681193:A:G	rs61682315	A	G	G	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr5	165681205	165681206	chr5:165681206:A:C	rs58657048	A	C	C	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr5	166071868	166071869	chr5:166071869:C:T	rs31767	C	T	T	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr5	166488468	166488469	chr5:166488469:G:A	rs17067006	G	A	G	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr5	167231884	167231885	chr5:167231885:C:T	rs6880208	C	T	C	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr5	167379691	167379692	chr5:167379692:A:G	rs11749740	A	G	A	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr5	167595872	167595873	chr5:167595873:C:T	rs6879246	C	T	C	Hoxd9.mouse_homeodomain_1	2	1	+	8.98901893988973	2.5015784822660927	CCCATAAAA
chr5	167639319	167639320	chr5:167639320:A:T	rs2125575	A	T	A	Hoxd9.mouse_homeodomain_1	4	1	-	8.027213970992095	1.1853955236614904	CACATAAAA
chr5	167799005	167799006	chr5:167799006:A:G	rs7730435	A	G	A	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr5	168169917	168169918	chr5:168169918:T:G	rs7711412	T	G	T	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr5	168260760	168260761	chr5:168260761:T:C	rs1862299	T	C	C	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr5	168290038	168290039	chr5:168290039:C:T	rs1406149321	C	T	C	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr5	168377655	168377656	chr5:168377656:G:A	rs11954765	G	A	G	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr5	168737222	168737223	chr5:168737223:A:G	rs55752742	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.287463081002919	6.953384481140425	CCAATAAAA
chr5	168744699	168744700	chr5:168744700:T:C	rs4591764	T	C	T	Hoxd9.mouse_homeodomain_1	5	1	-	7.1462160923678635	0.7720263741213071	GCCATAAAC
chr5	168754283	168754284	chr5:168754284:G:A	rs870724	G	A	A	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr5	168765788	168765789	chr5:168765789:C:T	rs1480523373	C	T	C	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr5	168861986	168861987	chr5:168861987:G:A	rs1875972	G	A	A	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr5	169085368	169085369	chr5:169085369:G:A	rs296011	G	A	A	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr5	169117220	169117221	chr5:169117221:T:C	rs35506927	T	C	T	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr5	169296671	169296672	chr5:169296672:G:A	rs73321509	G	A	G	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr5	169296699	169296700	chr5:169296700:C:T	rs892991875	C	T	C	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr5	169351710	169351711	chr5:169351711:G:A	rs114062667	G	A	G	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr5	169753670	169753671	chr5:169753671:G:A	rs61256498	G	A	g	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr5	169904445	169904446	chr5:169904446:C:A	rs261049	C	A	C	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr5	169941701	169941702	chr5:169941702:T:G	rs259910	T	G	T	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr5	170053402	170053403	chr5:170053403:C:T	rs74739205	C	T	c	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr5	170068029	170068030	chr5:170068030:T:A	chr5:170068030:T:A	T	A	T	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr5	170193377	170193378	chr5:170193378:A:G	rs1078430	A	G	A	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr5	170272567	170272568	chr5:170272568:G:A	rs190918282	G	A	G	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr5	170274012	170274013	chr5:170274013:C:T	rs36094591	C	T	T	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr5	170346682	170346683	chr5:170346683:A:T	rs1124531	A	T	T	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr5	170354985	170354986	chr5:170354986:G:A	rs6860569	G	A	A	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr5	170443225	170443226	chr5:170443226:G:C	rs12187658	G	C	C	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr5	170507115	170507116	chr5:170507116:G:A	rs7734708	G	A	G	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr5	170527978	170527979	chr5:170527979:G:A	rs6874241	G	A	G	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr5	170530609	170530610	chr5:170530610:C:T	rs6555903	C	T	c	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr5	170534202	170534203	chr5:170534203:T:A	rs9313507	T	A	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.409487817756228	6.406006680947584	CCCATTAAA
chr5	170591586	170591587	chr5:170591587:C:T	rs4867988	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	+	8.409487817756228	6.514940512447287	CCCATTAAA
chr5	170639887	170639888	chr5:170639888:T:C	rs6891256	T	C	C	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr5	170971560	170971561	chr5:170971561:T:G	rs145394826	T	G	T	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr5	171393311	171393312	chr5:171393312:G:A	rs11134697	G	A	A	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr5	171474512	171474513	chr5:171474513:T:G	rs977113519	T	G	T	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr5	171474540	171474541	chr5:171474541:G:A	rs1265929986	G	A	G	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr5	171501192	171501193	chr5:171501193:C:T	rs11740083	C	T	T	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr5	171622413	171622414	chr5:171622414:T:C	rs61231319	T	C	T	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr5	171761173	171761174	chr5:171761174:G:A	rs4868120	G	A	A	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr5	171979648	171979649	chr5:171979649:C:T	rs10866655	C	T	T	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr5	172176613	172176614	chr5:172176614:C:G	rs7702280	C	G	G	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr5	172176619	172176620	chr5:172176620:T:C	rs7722157	T	C	C	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr5	172224162	172224163	chr5:172224163:G:A	rs548023022	G	A	G	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr5	172282317	172282318	chr5:172282318:A:G	rs6888888	A	G	A	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr5	172380372	172380373	chr5:172380373:C:T	rs2879468	C	T	T	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr5	172399160	172399161	chr5:172399161:T:C	rs137988119	T	C	T	Hoxd9.mouse_homeodomain_1	7	1	-	8.287463081002919	1.5836371344111884	CCAATAAAA
chr5	172528615	172528616	chr5:172528616:G:A	rs35773846	G	A	A	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr5	172582861	172582862	chr5:172582862:C:T	rs10044648	C	T	T	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr5	172582898	172582899	chr5:172582899:T:G	rs10036525	T	G	T	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr5	172635290	172635291	chr5:172635291:C:T	rs80233510	C	T	C	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr5	172765850	172765851	chr5:172765851:C:T	rs368462232	C	T	C	Hoxd9.mouse_homeodomain_1	3	1	-	7.654940340027237	8.98901893988973	CCCGTAAAA
chr5	172765865	172765866	chr5:172765866:G:A	rs150083776	G	A	G	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr5	173237573	173237574	chr5:173237574:T:C	rs11739426	T	C	T	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr5	173826592	173826593	chr5:173826593:C:T	rs79716148	C	T	C	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr5	173826602	173826603	chr5:173826603:A:G	rs2659183	A	G	G	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr5	173852108	173852109	chr5:173852109:A:T	rs359454	A	T	a	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr5	173858735	173858736	chr5:173858736:G:A	rs6894596	G	A	g	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr5	173866506	173866507	chr5:173866507:C:T	rs1052850893	C	T	C	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr5	173880501	173880502	chr5:173880502:G:T	rs72810974	G	T	G	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr5	173883012	173883013	chr5:173883013:C:A	rs2973353	C	A	C	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr5	173946328	173946329	chr5:173946329:A:G	rs28391057	A	G	A	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr5	174065919	174065920	chr5:174065920:C:T	rs75137412	C	T	C	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr5	174245872	174245873	chr5:174245873:G:T	rs4868366	G	T	G	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr5	174261695	174261696	chr5:174261696:G:A	rs1835904	G	A	A	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr5	174261700	174261701	chr5:174261701:A:T	rs12519132	A	T	A	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr5	174387506	174387507	chr5:174387507:T:C	rs72820713	T	C	T	Hoxd9.mouse_homeodomain_1	4	1	+	8.98901893988973	6.333972295027152	CCCATAAAA
chr5	174511034	174511035	chr5:174511035:A:G	rs79619093	A	G	A	Hoxd9.mouse_homeodomain_1	4	1	-	8.98901893988973	6.333972295027152	CCCATAAAA
chr5	174620407	174620408	chr5:174620408:C:A	rs114073815	C	A	C	Hoxd9.mouse_homeodomain_1	0	1	-	7.212456609225008	5.628144526095533	GCCATAAAG
chr5	174620416	174620417	chr5:174620417:C:A	rs73334620	C	A	A	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr5	174843585	174843586	chr5:174843586:G:C	rs79998901	G	C	G	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr5	174852697	174852698	chr5:174852698:T:C	rs10062555	T	C	T	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr5	174955080	174955081	chr5:174955081:G:C	rs7730304	G	C	c	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr5	175046827	175046828	chr5:175046828:G:A	rs61491263	G	A	G	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr5	175232265	175232266	chr5:175232266:T:C	rs58764676	T	C	A	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr5	175251317	175251318	chr5:175251318:C:T	rs73323763	C	T	T	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr5	175348045	175348046	chr5:175348046:T:G	rs1421723	T	G	G	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr5	175445212	175445213	chr5:175445213:A:G	rs148280562	A	G	A	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr5	175495093	175495094	chr5:175495094:T:C	rs7702420	T	C	T	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr5	175580663	175580664	chr5:175580664:A:C	rs10079944	A	C	G	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr5	175580685	175580686	chr5:175580686:T:G	rs2937456	T	G	T	Hoxd9.mouse_homeodomain_1	5	1	-	7.889898683853121	5.992591131293127	ACCATAAAA
chr5	175590645	175590646	chr5:175590646:A:G	rs6884908	A	G	A	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr5	175623592	175623593	chr5:175623593:T:C	rs2913231	T	C	C	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr5	175653370	175653371	chr5:175653371:G:T	rs2963851	G	T	T	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr5	175823764	175823765	chr5:175823765:T:C	rs78010558	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.678783717710262	7.34470511784777	GCCATAAAA
chr5	175827104	175827105	chr5:175827105:C:T	rs113376524	C	T	C	Hoxd9.mouse_homeodomain_1	1	1	+	7.091711387329735	5.776909472996728	CCCATCAAA
chr5	176473728	176473729	chr5:176473729:G:A	rs114032953	G	A	G	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr5	176547751	176547752	chr5:176547752:A:G	rs10059406	A	G	A	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr5	176633844	176633845	chr5:176633845:G:A	rs1352303	G	A	G	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr5	176688076	176688077	chr5:176688077:G:A	rs72811209	G	A	G	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr5	176697439	176697440	chr5:176697440:A:G	rs12188203	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	7.241935125048919	5.907856525186427	CCCATACAA
chr5	176883196	176883197	chr5:176883197:T:C	rs4976661	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.027213970992095	6.693135371129603	CACATAAAA
chr5	177137187	177137188	chr5:177137188:G:A	rs1052432	G	A	A	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr5	177142186	177142187	chr5:177142187:T:C	rs9885210	T	C	C	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr5	178076188	178076189	chr5:178076189:C:T	chr5:178076189:C:T	C	T	.	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr5	178076215	178076216	chr5:178076216:G:A	rs150587881	G	A	.	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr5	178111966	178111967	chr5:178111967:A:G	rs36090803	A	G	.	Hoxd9.mouse_homeodomain_1	0	1	+	7.889898683853121	8.678783717710262	ACCATAAAA
chr5	178121194	178121195	chr5:178121195:G:A	rs115186199	G	A	G	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr5	178121238	178121239	chr5:178121239:C:T	rs189683566	C	T	C	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr5	178208595	178208596	chr5:178208596:T:C	chr5:178208596:T:C	T	C	T	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr5	178475627	178475628	chr5:178475628:A:T	rs77257798	A	T	A	Hoxd9.mouse_homeodomain_1	6	1	+	7.1462160923678635	4.256800322337277	GCCATAAAC
chr5	178538694	178538695	chr5:178538695:A:G	rs688074	A	G	A	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr5	178555011	178555012	chr5:178555012:A:C	rs262012	A	C	C	Hoxd9.mouse_homeodomain_1	1	1	+	7.716978748812629	8.678783717710262	GACATAAAA
chr5	178626165	178626166	chr5:178626166:C:A	rs145979054	C	A	C	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr5	178635775	178635776	chr5:178635776:A:G	rs4521498	A	G	A	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr5	178635798	178635799	chr5:178635799:A:C	rs115129639	A	C	C	Hoxd9.mouse_homeodomain_1	6	1	+	8.287463081002919	6.540379266162109	CCAATAAAA
chr5	178787368	178787369	chr5:178787369:G:C	chr5:178787369:G:C	G	C	g	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr5	178787368	178787369	chr5:178787369:G:T	rs10077060	G	T	g	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr5	178847622	178847623	chr5:178847623:G:A	rs6600985	G	A	g	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr5	179025500	179025501	chr5:179025501:G:A	rs6880315	G	A	A	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr5	179268084	179268085	chr5:179268085:A:G	rs6601028	A	G	G	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr5	179268104	179268105	chr5:179268105:T:C	rs78825768	T	C	T	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr5	179374998	179374999	chr5:179374999:G:A	rs35875926	G	A	G	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr5	179401645	179401646	chr5:179401646:T:C	rs517180	T	C	C	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr5	179464813	179464814	chr5:179464814:C:T	rs28812002	C	T	C	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr5	179515812	179515813	chr5:179515813:A:C	rs141979545	A	C	c	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr5	179623845	179623846	chr5:179623846:A:C	rs1039986375	A	C	A	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr5	179759316	179759317	chr5:179759317:C:T	rs34646062	C	T	C	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr5	180009465	180009466	chr5:180009466:T:C	rs6873639	T	C	T	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr5	180009498	180009499	chr5:180009499:A:G	rs6869349	A	G	A	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr5	180053026	180053027	chr5:180053027:G:A	rs7706570	G	A	G	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr5	180056685	180056686	chr5:180056686:T:A	rs78282770	T	A	T	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr5	180417523	180417524	chr5:180417524:T:C	rs7380019	T	C	t	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr5	180598673	180598674	chr5:180598674:C:G	rs11739214	C	G	G	Hoxd9.mouse_homeodomain_1	8	1	-	7.212456609225008	7.1462160923678635	GCCATAAAG
chr5	180691944	180691945	chr5:180691945:A:C	rs17080484	A	C	A	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr5	180786458	180786459	chr5:180786459:A:G	chr5:180786459:A:G	A	G	A	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr5	180786463	180786464	chr5:180786464:C:G	chr5:180786464:C:G	C	G	C	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr5	180795130	180795131	chr5:180795131:C:G	rs10903270	C	G	C	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr5	180843855	180843856	chr5:180843856:A:G	rs113804486	A	G	A	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr5	180869403	180869404	chr5:180869404:T:C	rs113334260	T	C	t	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr5	181114457	181114458	chr5:181114458:C:T	rs115078570	C	T	c	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr5	181206513	181206514	chr5:181206514:C:T	rs2770949	C	T	C	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr6	149608	149609	chr6:149609:G:A	rs7754266	G	A	.	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr6	300164	300165	chr6:300165:C:T	rs59772395	C	T	C	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr6	453196	453197	chr6:453197:C:T	rs9378837	C	T	c	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr6	685353	685354	chr6:685354:A:C	rs7768391	A	C	C	Hoxd9.mouse_homeodomain_1	3	1	+	7.889898683853121	1.3143905796496398	ACCATAAAA
chr6	686611	686612	chr6:686612:T:C	rs9504756	T	C	C	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr6	686615	686616	chr6:686616:T:C	rs9504757	T	C	C	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr6	740914	740915	chr6:740915:C:A	rs2788233	C	A	A	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr6	893219	893220	chr6:893220:G:C	rs2756317	G	C	C	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr6	927756	927757	chr6:927757:C:T	rs9505529	C	T	C	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr6	1038079	1038080	chr6:1038080:A:T	rs2317451	A	T	t	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr6	1310341	1310342	chr6:1310342:G:C	rs4357176	G	C	C	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr6	1369035	1369036	chr6:1369036:C:T	rs12190545	C	T	C	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr6	1414348	1414349	chr6:1414349:C:T	rs1711957	C	T	T	Hoxd9.mouse_homeodomain_1	1	1	+	8.099252595576761	6.784450681243753	GCCATTAAA
chr6	1479234	1479235	chr6:1479235:C:T	rs151095131	C	T	C	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr6	1519510	1519511	chr6:1519511:A:T	rs57770600	A	T	T	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr6	1529636	1529637	chr6:1529637:T:C	rs2816283	T	C	C	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr6	1539848	1539849	chr6:1539849:C:T	rs62388641	C	T	C	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr6	1575399	1575400	chr6:1575400:C:T	rs147561996	C	T	C	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr6	1816397	1816398	chr6:1816398:G:A	rs9378314	G	A	G	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr6	1817593	1817594	chr6:1817594:A:G	rs148965198	A	G	A	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr6	1915129	1915130	chr6:1915130:G:C	rs3778553	G	C	G	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr6	2003455	2003456	chr6:2003456:A:T	rs6924458	A	T	A	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr6	2197535	2197536	chr6:2197536:C:A	rs58597203	C	A	C	Hoxd9.mouse_homeodomain_1	0	1	+	7.654940340027237	6.555820083990628	CCCGTAAAA
chr6	2477967	2477968	chr6:2477968:A:G	chr6:2477968:A:G	A	G	A	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr6	2659151	2659152	chr6:2659152:G:T	rs115418768	G	T	G	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr6	2690143	2690144	chr6:2690144:C:G	rs1555677	C	G	C	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr6	2735010	2735011	chr6:2735011:A:G	rs13192400	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.027213970992095	6.693135371129603	CACATAAAA
chr6	2829590	2829591	chr6:2829591:T:G	rs62393229	T	G	T	Hoxd9.mouse_homeodomain_1	7	1	-	7.889898683853121	5.000482913822536	ACCATAAAA
chr6	2869958	2869959	chr6:2869959:G:C	rs2083308	G	C	G	Hoxd9.mouse_homeodomain_1	0	1	+	7.716978748812629	8.027213970992095	GACATAAAA
chr6	2913281	2913282	chr6:2913282:G:A	rs370472184	G	A	G	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr6	2970454	2970455	chr6:2970455:A:C	rs57652499	A	C	a	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr6	3337551	3337552	chr6:3337552:C:T	rs17136440	C	T	T	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr6	3350024	3350025	chr6:3350025:A:C	rs998989266	A	C	A	Hoxd9.mouse_homeodomain_1	8	1	+	8.027213970992095	6.494646345649697	CACATAAAA
chr6	3379062	3379063	chr6:3379063:T:C	rs116125045	T	C	T	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr6	3399543	3399544	chr6:3399544:A:G	rs55851727	A	G	A	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr6	3419196	3419197	chr6:3419197:A:G	rs6915982	A	G	G	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr6	3660190	3660191	chr6:3660191:G:T	rs10458075	G	T	T	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr6	3786081	3786082	chr6:3786082:A:G	rs114951946	A	G	G	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr6	3801052	3801053	chr6:3801053:G:A	rs73722591	G	A	G	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr6	3868762	3868763	chr6:3868763:T:C	rs114712871	T	C	T	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr6	3881631	3881632	chr6:3881632:T:C	rs7744359	T	C	C	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr6	3882464	3882465	chr6:3882465:G:A	rs1033081364	G	A	G	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr6	4003129	4003130	chr6:4003130:T:C	rs1886334	T	C	C	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr6	4093604	4093605	chr6:4093605:T:C	rs694903	T	C	C	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr6	4254399	4254400	chr6:4254400:G:A	rs9328230	G	A	G	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr6	4305192	4305193	chr6:4305193:C:A	rs76985193	C	A	C	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr6	4352408	4352409	chr6:4352409:G:T	rs9328245	G	T	T	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr6	4446966	4446967	chr6:4446967:C:T	rs145404318	C	T	C	Hoxd9.mouse_homeodomain_1	1	1	+	7.091711387329735	5.776909472996728	CCCATCAAA
chr6	4451607	4451608	chr6:4451608:A:C	rs1010638	A	C	A	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr6	4732372	4732373	chr6:4732373:T:G	rs9328272	T	G	T	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr6	4772851	4772852	chr6:4772852:C:T	rs6928581	C	T	C	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr6	4808157	4808158	chr6:4808158:A:G	rs6938682	A	G	G	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr6	5080303	5080304	chr6:5080304:A:G	rs379169	A	G	g	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr6	5133197	5133198	chr6:5133198:C:T	rs85204	C	T	C	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr6	5208483	5208484	chr6:5208484:T:C	rs7769559	T	C	T	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr6	5208507	5208508	chr6:5208508:A:T	rs12206736	A	T	T	Hoxd9.mouse_homeodomain_1	4	1	-	8.98901893988973	2.147200492559124	CCCATAAAA
chr6	5208526	5208527	chr6:5208527:T:C	rs17139780	T	C	T	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr6	5389184	5389185	chr6:5389185:G:A	rs2503811	G	A	A	Hoxd9.mouse_homeodomain_1	1	1	-	8.678783717710262	7.363981803377255	GCCATAAAA
chr6	5435463	5435464	chr6:5435464:A:G	rs2503836	A	G	A	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr6	5482099	5482100	chr6:5482100:G:A	rs2552291	G	A	A	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr6	5654244	5654245	chr6:5654245:C:A	rs11243026	C	A	C	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr6	5701847	5701848	chr6:5701848:G:A	rs71557578	G	A	G	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr6	5874243	5874244	chr6:5874244:C:G	rs67554460	C	G	G	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr6	6237378	6237379	chr6:6237379:T:C	rs114666084	T	C	T	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr6	6332850	6332851	chr6:6332851:T:G	rs12204494	T	G	T	Hoxd9.mouse_homeodomain_1	4	1	+	8.678783717710262	1.8369652703796566	GCCATAAAA
chr6	6396747	6396748	chr6:6396748:C:T	rs7764220	C	T	T	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr6	6434377	6434378	chr6:6434378:T:A	rs75140244	T	A	T	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr6	6460681	6460682	chr6:6460682:C:T	rs9405930	C	T	C	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr6	6463122	6463123	chr6:6463123:A:T	rs9392793	A	T	A	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr6	6497902	6497903	chr6:6497903:G:A	rs10447480	G	A	G	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr6	6588698	6588699	chr6:6588699:G:A	rs201153136	G	A	G	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr6	6689817	6689818	chr6:6689818:C:A	rs74641270	C	A	C	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr6	6858917	6858918	chr6:6858918:G:A	rs11243124	G	A	G	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr6	6943612	6943613	chr6:6943613:G:C	rs28495903	G	C	G	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr6	6943655	6943656	chr6:6943656:G:T	rs186177754	G	T	G	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr6	7178305	7178306	chr6:7178306:T:A	rs6935691	T	A	A	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr6	7201838	7201839	chr6:7201839:T:C	rs370521586	T	C	T	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr6	7255504	7255505	chr6:7255505:T:C	rs111656279	T	C	T	Hoxd9.mouse_homeodomain_1	8	1	-	8.98901893988973	7.522691831404475	CCCATAAAA
chr6	7625618	7625619	chr6:7625619:T:G	rs11243194	T	G	T	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr6	7625620	7625621	chr6:7625621:G:T	rs9405345	G	T	t	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr6	7633424	7633425	chr6:7633425:G:A	rs9502630	G	A	A	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr6	7698150	7698151	chr6:7698151:T:C	rs927415	T	C	C	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr6	7729380	7729381	chr6:7729381:C:T	rs270417	C	T	T	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr6	7762995	7762996	chr6:7762996:C:T	rs34777872	C	T	c	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr6	7922787	7922788	chr6:7922788:C:A	rs116164036	C	A	C	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr6	7922791	7922792	chr6:7922792:G:T	rs72829257	G	T	G	Hoxd9.mouse_homeodomain_1	6	1	-	7.241935125048919	8.98901893988973	CCCATACAA
chr6	8006373	8006374	chr6:8006374:A:T	rs17143273	A	T	A	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr6	8539615	8539616	chr6:8539616:T:C	rs230251	T	C	T	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr6	8556745	8556746	chr6:8556746:G:T	rs330124	G	T	G	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr6	8739499	8739500	chr6:8739500:G:A	rs3005148	G	A	A	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr6	8838883	8838884	chr6:8838884:A:T	rs960432328	A	T	A	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr6	8944445	8944446	chr6:8944446:A:G	rs76933156	A	G	A	Hoxd9.mouse_homeodomain_1	7	1	+	8.287463081002919	1.5836371344111884	CCAATAAAA
chr6	9140578	9140579	chr6:9140579:G:A	rs1886350	G	A	T	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr6	9172270	9172271	chr6:9172271:T:A	rs144443028	T	A	C	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr6	9405664	9405665	chr6:9405665:C:T	rs184869466	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	+	8.409487817756228	6.514940512447287	CCCATTAAA
chr6	9841981	9841982	chr6:9841982:T:C	rs707781	T	C	T	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr6	10202331	10202332	chr6:10202332:T:A	rs78447403	T	A	T	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr6	10202348	10202349	chr6:10202349:G:A	chr6:10202349:G:A	G	A	G	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr6	10276215	10276216	chr6:10276216:T:C	rs9465760	T	C	T	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr6	10418336	10418337	chr6:10418337:A:T	rs17635655	A	T	A	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr6	10482628	10482629	chr6:10482629:A:C	rs470153	A	C	A	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr6	10587602	10587603	chr6:10587603:A:G	rs75208823	A	G	A	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr6	10691058	10691059	chr6:10691059:C:G	rs925920393	C	G	C	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr6	10722287	10722288	chr6:10722288:G:A	rs114617027	G	A	G	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr6	10888001	10888002	chr6:10888002:A:G	rs115369892	A	G	A	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr6	11194764	11194765	chr6:11194765:G:C	rs77368367	G	C	G	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr6	11224971	11224972	chr6:11224972:A:G	rs116725549	A	G	A	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr6	11231890	11231891	chr6:11231891:C:T	rs78787402	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	+	8.287463081002919	6.392915775693977	CCAATAAAA
chr6	11349103	11349104	chr6:11349104:G:A	rs141955082	G	A	G	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr6	11641236	11641237	chr6:11641237:G:A	rs1150573	G	A	A	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr6	11745331	11745332	chr6:11745332:C:T	rs210926	C	T	T	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr6	11760025	11760026	chr6:11760026:A:C	rs9394295	A	C	C	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr6	11809977	11809978	chr6:11809978:A:G	rs34927257	A	G	A	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr6	11824863	11824864	chr6:11824864:G:A	rs6899747	G	A	G	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr6	11855381	11855382	chr6:11855382:T:G	rs6457906	T	G	G	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr6	11870092	11870093	chr6:11870093:G:A	rs114892515	G	A	G	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr6	11971321	11971322	chr6:11971322:G:A	rs12213771	G	A	G	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr6	12010671	12010672	chr6:12010672:A:C	rs796397389	A	C	A	Hoxd9.mouse_homeodomain_1	8	1	+	7.075409217893736	5.542841592551335	CCCGTTAAA
chr6	12060814	12060815	chr6:12060815:G:A	rs117280484	G	A	G	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr6	12112820	12112821	chr6:12112821:C:A	rs73724358	C	A	C	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr6	12150200	12150201	chr6:12150201:G:A	rs16872314	G	A	G	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr6	12241965	12241966	chr6:12241966:G:C	rs74591550	G	C	G	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr6	12290489	12290490	chr6:12290490:C:T	chr6:12290490:C:T	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	+	7.075409217893736	5.180861912584794	CCCGTTAAA
chr6	12349101	12349102	chr6:12349102:C:T	rs75156868	C	T	C	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr6	12365786	12365787	chr6:12365787:A:C	rs78420556	A	C	A	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr6	12492423	12492424	chr6:12492424:T:G	rs7773215	T	G	C	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr6	12565923	12565924	chr6:12565924:C:A	rs147037288	C	A	C	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr6	12608222	12608223	chr6:12608223:G:A	chr6:12608223:G:A	G	A	G	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr6	12801734	12801735	chr6:12801735:A:C	rs9381401	A	C	A	Hoxd9.mouse_homeodomain_1	7	1	+	7.716978748812629	4.827562978782042	GACATAAAA
chr6	12865458	12865459	chr6:12865459:T:G	rs56712240	T	G	T	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr6	13044975	13044976	chr6:13044976:C:T	rs13193716	C	T	T	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr6	13135107	13135108	chr6:13135108:A:G	rs6925345	A	G	-	Hoxd9.mouse_homeodomain_1	4	1	-	8.287463081002919	5.632416436140341	CCAATAAAA
chr6	13323662	13323663	chr6:13323663:A:G	rs2458304	A	G	G	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr6	13340125	13340126	chr6:13340126:G:A	rs576060169	G	A	G	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr6	13454370	13454371	chr6:13454371:A:G	rs2560762	A	G	A	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr6	13490414	13490415	chr6:13490415:C:G	rs9382144	C	G	C	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr6	13717222	13717223	chr6:13717223:T:A	rs420874	T	A	t	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr6	13755098	13755099	chr6:13755099:G:A	rs55885615	G	A	G	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr6	13854599	13854600	chr6:13854600:T:C	rs9382632	T	C	C	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr6	13925757	13925758	chr6:13925758:A:G	chr6:13925758:A:G	A	G	A	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr6	13989553	13989554	chr6:13989554:A:C	rs7758312	A	C	A	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr6	14044727	14044728	chr6:14044728:C:T	rs6925247	C	T	C	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr6	14100518	14100519	chr6:14100519:G:A	rs115470478	G	A	G	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr6	14128843	14128844	chr6:14128844:T:G	rs4712226	T	G	T	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr6	14207548	14207549	chr6:14207549:T:C	rs1999359	T	C	T	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr6	14244042	14244043	chr6:14244043:G:T	rs12207359	G	T	G	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr6	14278397	14278398	chr6:14278398:G:A	rs149569690	G	A	G	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr6	14278407	14278408	chr6:14278408:T:C	rs1888644	T	C	T	Hoxd9.mouse_homeodomain_1	8	1	-	7.091711387329735	5.6253842788444794	CCCATCAAA
chr6	14572196	14572197	chr6:14572197:C:T	rs6939631	C	T	T	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr6	14753240	14753241	chr6:14753241:C:T	rs7763310	C	T	C	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr6	14874141	14874142	chr6:14874142:A:G	rs62390320	A	G	A	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr6	14917382	14917383	chr6:14917383:T:G	rs114831873	T	G	T	Hoxd9.mouse_homeodomain_1	4	1	+	8.287463081002919	1.445644633672313	CCAATAAAA
chr6	15089375	15089376	chr6:15089376:C:T	rs9358050	C	T	C	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr6	15207791	15207792	chr6:15207792:A:G	rs374265566	A	G	A	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr6	15341143	15341144	chr6:15341144:G:A	rs707833	G	A	G	Hoxd9.mouse_homeodomain_1	0	1	-	7.091711387329735	5.197164082020794	CCCATCAAA
chr6	15411958	15411959	chr6:15411959:G:A	rs187302069	G	A	G	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr6	15437383	15437384	chr6:15437384:C:T	rs2282826	C	T	T	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr6	15463163	15463164	chr6:15463164:T:C	rs2237138	T	C	T	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr6	15482209	15482210	chr6:15482210:T:C	rs1546851	T	C	C	Hoxd9.mouse_homeodomain_1	1	1	-	8.027213970992095	2.5794857111073646	CACATAAAA
chr6	15534341	15534342	chr6:15534342:C:T	rs9383063	C	T	T	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr6	15537093	15537094	chr6:15537094:T:C	rs10456773	T	C	T	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr6	15691795	15691796	chr6:15691796:T:C	rs10484353	T	C	A	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr6	15729835	15729836	chr6:15729836:T:C	rs747074	T	C	T	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr6	15910188	15910189	chr6:15910189:C:G	rs78204652	C	G	C	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr6	15910217	15910218	chr6:15910218:G:C	rs73370343	G	C	C	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr6	16004791	16004792	chr6:16004792:C:T	rs9477011	C	T	T	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr6	16080443	16080444	chr6:16080444:A:C	rs4716041	A	C	A	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr6	16103654	16103655	chr6:16103655:G:C	chr6:16103655:G:C	G	C	G	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr6	16113790	16113791	chr6:16113791:C:T	rs12205047	C	T	C	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr6	16115563	16115564	chr6:16115564:T:G	rs9370865	T	G	T	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr6	16162276	16162277	chr6:16162277:T:C	rs7742144	T	C	C	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr6	16200424	16200425	chr6:16200425:G:A	rs528174726	G	A	G	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr6	16226060	16226061	chr6:16226061:T:A	rs34677322	T	A	T	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr6	16297483	16297484	chr6:16297484:T:C	rs180019	T	C	C	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr6	16345166	16345167	chr6:16345167:A:C	rs90671	A	C	A	Hoxd9.mouse_homeodomain_1	1	1	+	7.716978748812629	8.678783717710262	GACATAAAA
chr6	16514176	16514177	chr6:16514177:G:A	rs16878314	G	A	G	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr6	16630381	16630382	chr6:16630382:A:G	rs76494113	A	G	A	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr6	16636023	16636024	chr6:16636024:G:A	rs9297014	G	A	a	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr6	16649481	16649482	chr6:16649482:T:C	rs146573598	T	C	T	Hoxd9.mouse_homeodomain_1	4	1	+	7.716978748812629	5.061932103950051	GACATAAAA
chr6	16681161	16681162	chr6:16681162:G:C	rs3793104	G	C	C	Hoxd9.mouse_homeodomain_1	2	1	-	8.099252595576761	4.631260938124431	GCCATTAAA
chr6	16978443	16978444	chr6:16978444:C:T	rs9367932	C	T	C	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr6	17015807	17015808	chr6:17015808:G:A	rs116048827	G	A	G	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr6	17062862	17062863	chr6:17062863:A:G	rs9383240	A	G	A	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr6	17120008	17120009	chr6:17120009:A:C	rs12203596	A	C	A	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr6	17173144	17173145	chr6:17173145:G:A	rs2181349	G	A	A	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr6	17710577	17710578	chr6:17710578:G:A	rs78583509	G	A	G	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr6	17839468	17839469	chr6:17839469:G:A	rs4716194	G	A	A	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr6	17864047	17864048	chr6:17864048:T:A	rs74497439	T	A	T	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr6	17864084	17864085	chr6:17864085:G:A	rs114492203	G	A	G	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr6	17903188	17903189	chr6:17903189:A:G	rs9477555	A	G	A	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr6	18015436	18015437	chr6:18015437:T:C	rs2820222	T	C	C	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr6	18020360	18020361	chr6:18020361:G:A	rs56184116	G	A	G	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr6	18020387	18020388	chr6:18020388:C:T	rs74771937	C	T	C	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr6	18293600	18293601	chr6:18293601:G:A	rs368735	G	A	A	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr6	18335199	18335200	chr6:18335200:G:C	rs7757820	G	C	C	Hoxd9.mouse_homeodomain_1	0	1	+	7.716978748812629	8.027213970992095	GACATAAAA
chr6	18352744	18352745	chr6:18352745:A:C	rs1951924	A	C	.	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr6	18521430	18521431	chr6:18521431:G:A	rs9383402	G	A	G	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr6	18537813	18537814	chr6:18537814:T:C	rs9368002	T	C	T	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr6	19041860	19041861	chr6:19041861:G:A	rs10484382	G	A	G	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr6	19352318	19352319	chr6:19352319:T:C	rs4712387	T	C	C	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr6	19399916	19399917	chr6:19399917:A:T	rs1874398	A	T	A	Hoxd9.mouse_homeodomain_1	4	1	-	8.98901893988973	2.147200492559124	CCCATAAAA
chr6	19725741	19725742	chr6:19725742:T:C	rs12528349	T	C	T	Hoxd9.mouse_homeodomain_1	4	1	+	8.678783717710262	6.023737072847684	GCCATAAAA
chr6	19763421	19763422	chr6:19763422:A:G	rs9350178	A	G	A	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr6	19811428	19811429	chr6:19811429:A:G	rs9350190	A	G	A	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr6	19811458	19811459	chr6:19811459:C:A	rs78402429	C	A	C	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr6	19906335	19906336	chr6:19906336:T:C	rs1931771	T	C	t	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr6	20202538	20202539	chr6:20202539:G:A	rs10447379	G	A	A	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr6	20209112	20209113	chr6:20209113:T:G	rs1536581	T	G	T	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr6	20267454	20267455	chr6:20267455:G:A	rs112097676	G	A	G	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr6	20466996	20466997	chr6:20466997:C:T	rs9350250	C	T	C	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr6	20738177	20738178	chr6:20738178:A:G	rs9368229	A	G	A	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr6	20768231	20768232	chr6:20768232:T:C	rs9465886	T	C	C	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr6	20768243	20768244	chr6:20768244:C:T	rs6926436	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	+	7.241935125048919	5.347387819739977	CCCATACAA
chr6	20827596	20827597	chr6:20827597:G:A	rs9348447	G	A	G	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr6	20978204	20978205	chr6:20978205:A:G	rs114736124	A	G	A	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr6	21045176	21045177	chr6:21045177:G:C	rs201324	G	C	G	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr6	21102325	21102326	chr6:21102326:C:T	rs4712584	C	T	C	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr6	21185665	21185666	chr6:21185666:T:C	rs78076731	T	C	C	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr6	21273649	21273650	chr6:21273650:A:G	rs807829	A	G	A	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr6	21372402	21372403	chr6:21372403:A:G	rs2328601	A	G	G	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr6	21372447	21372448	chr6:21372448:G:T	rs9358427	G	T	G	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr6	21687859	21687860	chr6:21687860:T:G	rs76257188	T	G	G	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr6	21769312	21769313	chr6:21769313:T:C	rs6934580	T	C	C	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr6	21826109	21826110	chr6:21826110:C:T	rs79950618	C	T	C	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr6	21967009	21967010	chr6:21967010:C:G	rs74661870	C	G	C	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr6	21967383	21967384	chr6:21967384:G:C	rs868948	G	C	C	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr6	21987769	21987770	chr6:21987770:T:A	rs6937945	T	A	T	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr6	22079786	22079787	chr6:22079787:A:G	rs9466259	A	G	A	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr6	22190108	22190109	chr6:22190109:A:G	rs4712661	A	G	A	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr6	22208444	22208445	chr6:22208445:A:G	rs55666684	A	G	A	Hoxd9.mouse_homeodomain_1	6	1	+	7.091711387329735	0.38788544073800313	CCCATCAAA
chr6	22271344	22271345	chr6:22271345:C:T	rs139677029	C	T	C	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr6	22352972	22352973	chr6:22352973:T:G	rs1737225	T	G	G	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr6	22367779	22367780	chr6:22367780:T:A	rs115016284	T	A	T	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr6	22411881	22411882	chr6:22411882:A:G	rs55766134	A	G	A	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr6	22411902	22411903	chr6:22411903:T:A	rs12176332	T	A	T	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr6	22447802	22447803	chr6:22447803:T:A	rs147715631	T	A	T	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr6	22452287	22452288	chr6:22452288:T:C	rs35835538	T	C	T	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr6	22452298	22452299	chr6:22452299:A:C	rs60380354	A	C	A	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr6	22452320	22452321	chr6:22452321:A:G	rs35661144	A	G	A	Hoxd9.mouse_homeodomain_1	4	1	-	8.287463081002919	5.632416436140341	CCAATAAAA
chr6	22607829	22607830	chr6:22607830:G:A	rs75040753	G	A	G	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr6	22614335	22614336	chr6:22614336:C:T	rs9466409	C	T	T	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr6	22786141	22786142	chr6:22786142:G:A	rs146251719	G	A	G	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr6	22786149	22786150	chr6:22786150:A:C	rs1474662	A	C	C	Hoxd9.mouse_homeodomain_1	5	1	+	8.027213970992095	6.1299064184321015	CACATAAAA
chr6	22822284	22822285	chr6:22822285:G:A	rs12529832	G	A	G	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr6	22922238	22922239	chr6:22922239:C:G	rs9637950	C	G	T	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr6	23177849	23177850	chr6:23177850:A:G	rs62399097	A	G	A	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr6	23764812	23764813	chr6:23764813:T:C	rs6910557	T	C	C	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr6	23764825	23764826	chr6:23764826:G:A	rs6931216	G	A	A	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr6	23765661	23765662	chr6:23765662:T:C	rs10456285	T	C	T	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr6	24223289	24223290	chr6:24223290:T:C	rs191805069	T	C	T	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr6	24280447	24280448	chr6:24280448:A:G	rs62400408	A	G	A	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr6	24397956	24397957	chr6:24397957:G:A	rs62401885	G	A	G	Hoxd9.mouse_homeodomain_1	2	1	-	8.409487817756228	1.922047360132591	CCCATTAAA
chr6	24428598	24428599	chr6:24428599:A:T	rs74293231	A	T	a	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr6	24435333	24435334	chr6:24435334:T:A	rs114401610	T	A	T	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr6	24438505	24438506	chr6:24438506:G:A	rs6922631	G	A	g	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr6	24493650	24493651	chr6:24493651:T:C	rs2744574	T	C	T	Hoxd9.mouse_homeodomain_1	4	1	+	7.9772278588234515	5.3221812139608735	GCAATAAAA
chr6	24645238	24645239	chr6:24645239:C:T	rs2038138	C	T	T	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr6	24822075	24822076	chr6:24822076:T:G	rs4712856	T	G	G	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr6	24961161	24961162	chr6:24961162:T:C	rs403118	T	C	C	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr6	24961162	24961163	chr6:24961163:G:A	rs1028477	G	A	G	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr6	24972879	24972880	chr6:24972880:A:G	rs9393597	A	G	A	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr6	25177746	25177747	chr6:25177747:G:A	rs7743008	G	A	G	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr6	25434075	25434076	chr6:25434076:G:T	rs9393644	G	T	G	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr6	25745037	25745038	chr6:25745038:T:A	rs7775354	T	A	A	Hoxd9.mouse_homeodomain_1	8	1	-	7.716978748812629	4.784465624046561	GACATAAAA
chr6	25890427	25890428	chr6:25890428:A:G	rs13214169	A	G	A	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr6	26021997	26021998	chr6:26021998:G:A	rs749781123	G	A	G	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr6	26033017	26033018	chr6:26033018:G:A	rs112700668	G	A	A	Hoxd9.mouse_homeodomain_1	0	1	+	8.099252595576761	7.3103675617196195	GCCATTAAA
chr6	26034979	26034980	chr6:26034980:G:A	rs4401650	G	A	A	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr6	26123310	26123311	chr6:26123311:G:C	rs198822	G	C	C	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr6	26123318	26123319	chr6:26123319:T:G	rs59995466	T	G	T	Hoxd9.mouse_homeodomain_1	6	1	-	8.099252595576761	6.3521687807359495	GCCATTAAA
chr6	26123324	26123325	chr6:26123325:C:T	rs905123367	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	-	8.099252595576761	7.3103675617196195	GCCATTAAA
chr6	26123329	26123330	chr6:26123330:T:A	rs548119883	T	A	T	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr6	26189970	26189971	chr6:26189971:C:T	rs80259160	C	T	T	Hoxd9.mouse_homeodomain_1	0	1	+	7.654940340027237	5.7603930347182954	CCCGTAAAA
chr6	26198670	26198671	chr6:26198671:G:A	rs531429704	G	A	G	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr6	26224114	26224115	chr6:26224115:C:G	rs74928264	C	G	C	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr6	26224148	26224149	chr6:26224149:A:G	rs79308455	A	G	A	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr6	26250800	26250801	chr6:26250801:T:C	rs549503061	T	C	.	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr6	26364466	26364467	chr6:26364467:C:T	rs141405186	C	T	C	Hoxd9.mouse_homeodomain_1	2	1	+	7.45645131454733	0.9690108569236928	CCCATAAAC
chr6	26568512	26568513	chr6:26568513:C:T	rs1078679	C	T	T	Hoxd9.mouse_homeodomain_1	1	1	+	8.409487817756228	7.094685903423221	CCCATTAAA
chr6	26571856	26571857	chr6:26571857:A:G	rs181712487	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.027213970992095	6.693135371129603	CACATAAAA
chr6	26571871	26571872	chr6:26571872:G:A	rs79849744	G	A	G	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr6	26571874	26571875	chr6:26571875:G:A	rs143327578	G	A	G	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr6	27019536	27019537	chr6:27019537:A:C	rs72838245	A	C	.	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr6	27098922	27098923	chr6:27098923:A:C	rs73739551	A	C	A	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr6	27140019	27140020	chr6:27140020:G:A	rs75206923	G	A	G	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr6	27280897	27280898	chr6:27280898:G:A	chr6:27280898:G:A	G	A	G	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr6	27360208	27360209	chr6:27360209:T:G	rs1127574	T	G	T	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr6	27688452	27688453	chr6:27688453:A:G	rs1051146861	A	G	A	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr6	27688475	27688476	chr6:27688476:G:A	rs10946943	G	A	G	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr6	27688477	27688478	chr6:27688478:C:G	rs960334277	C	G	C	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr6	27776098	27776099	chr6:27776099:T:C	rs9348777	T	C	t	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr6	27805885	27805886	chr6:27805886:T:C	rs200480	T	C	C	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr6	27866026	27866027	chr6:27866027:A:C	rs172083	A	C	a	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr6	28012010	28012011	chr6:28012011:A:G	rs71559061	A	G	A	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr6	28212878	28212879	chr6:28212879:C:T	rs116563181	C	T	C	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr6	28269880	28269881	chr6:28269881:G:A	chr6:28269881:G:A	G	A	G	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr6	28727652	28727653	chr6:28727653:A:C	rs7751884	A	C	C	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr6	28884714	28884715	chr6:28884715:G:A	rs6456866	G	A	G	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr6	28884719	28884720	chr6:28884720:G:A	rs73741219	G	A	G	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr6	28885009	28885010	chr6:28885010:C:T	rs59450563	C	T	C	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr6	28927938	28927939	chr6:28927939:G:T	rs72860085	G	T	G	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr6	28954289	28954290	chr6:28954290:G:A	rs148462657	G	A	G	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr6	28982048	28982049	chr6:28982049:G:C	rs915588180	G	C	G	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr6	29056599	29056600	chr6:29056600:T:G	chr6:29056600:T:G	T	G	t	Hoxd9.mouse_homeodomain_1	3	1	-	8.678783717710262	2.1032756135067814	GCCATAAAA
chr6	29130158	29130159	chr6:29130159:C:A	rs3116844	C	A	c	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr6	29424725	29424726	chr6:29424726:C:G	rs7754054	C	G	G	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr6	29514170	29514171	chr6:29514171:G:A	rs1010409	G	A	A	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr6	29634664	29634665	chr6:29634665:A:G	rs55971964	A	G	A	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr6	29737627	29737628	chr6:29737628:C:T	rs2743917	C	T	C	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr6	29753152	29753153	chr6:29753153:G:T	rs186121697	G	T	T	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr6	29753183	29753184	chr6:29753184:C:G	rs4713243	C	G	C	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr6	29753740	29753741	chr6:29753741:A:C	rs1610626	A	C	C	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr6	29766406	29766407	chr6:29766407:A:G	rs1737051	A	G	a	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr6	29795125	29795126	chr6:29795126:G:A	rs1737002	G	A	-	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr6	29836676	29836677	chr6:29836677:G:A	rs62391986	G	A	-	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr6	29867568	29867569	chr6:29867569:A:C	rs55773721	A	C	-	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr6	29887176	29887177	chr6:29887177:G:A	rs1611605	G	A	-	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr6	29911877	29911878	chr6:29911878:T:C	rs2734929	T	C	-	Hoxd9.mouse_homeodomain_1	7	1	-	8.678783717710262	1.9749577711185315	GCCATAAAA
chr6	29950476	29950477	chr6:29950477:A:T	rs1655906	A	T	-	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr6	29991359	29991360	chr6:29991360:G:A	rs9260944	G	A	a	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr6	30119572	30119573	chr6:30119573:A:C	rs114179448	A	C	A	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr6	30134286	30134287	chr6:30134287:G:C	rs9261463	G	C	G	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr6	30143748	30143749	chr6:30143749:C:T	rs9261501	C	T	T	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr6	30171075	30171076	chr6:30171076:C:A	rs41272591	C	A	C	Hoxd9.mouse_homeodomain_1	1	1	+	7.9772278588234515	7.0154228899258175	GCAATAAAA
chr6	30196177	30196178	chr6:30196178:G:A	rs2517614	G	A	G	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr6	30230217	30230218	chr6:30230218:C:T	rs3094139	C	T	C	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr6	30231289	30231290	chr6:30231290:G:A	rs1573295	G	A	G	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr6	30452428	30452429	chr6:30452429:G:C	rs9885622	G	C	G	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr6	30457379	30457380	chr6:30457380:G:A	rs2187975	G	A	g	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr6	30529104	30529105	chr6:30529105:G:T	rs2516649	G	T	G	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr6	30785368	30785369	chr6:30785369:A:G	rs4713360	A	G	A	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr6	30813891	30813892	chr6:30813892:T:C	rs117609393	T	C	T	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr6	30900455	30900456	chr6:30900456:G:C	rs9468844	G	C	C	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr6	30907825	30907826	chr6:30907826:G:A	rs3218804	G	A	G	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr6	30907844	30907845	chr6:30907845:T:C	rs2284176	T	C	C	Hoxd9.mouse_homeodomain_1	3	1	-	8.98901893988973	7.654940340027237	CCCATAAAA
chr6	30955957	30955958	chr6:30955958:T:C	rs73727141	T	C	T	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr6	31174487	31174488	chr6:31174488:C:G	rs1265157	C	G	C	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr6	31203803	31203804	chr6:31203804:G:A	rs9263879	G	A	G	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr6	31203820	31203821	chr6:31203821:T:C	rs1135811	T	C	T	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr6	31274015	31274016	chr6:31274016:G:A	rs67058142	G	A	G	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr6	31274059	31274060	chr6:31274060:C:T	rs3130447	C	T	T	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr6	31274060	31274061	chr6:31274061:T:C	rs3094681	T	C	C	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr6	31288257	31288258	chr6:31288258:G:A	rs17198741	G	A	G	Hoxd9.mouse_homeodomain_1	1	1	-	7.241935125048919	5.927133210715912	CCCATACAA
chr6	31377243	31377244	chr6:31377244:G:A	rs7382258	G	A	g	Hoxd9.mouse_homeodomain_1	8	1	-	7.45645131454733	6.056505815123662	CCCATAAAC
chr6	31403206	31403207	chr6:31403207:C:T	rs116135464	C	T	C	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr6	31403222	31403223	chr6:31403223:A:G	rs36222681	A	G	G	Hoxd9.mouse_homeodomain_1	5	1	-	8.409487817756228	7.091711387329735	CCCATTAAA
chr6	31403230	31403231	chr6:31403231:G:A	rs112799839	G	A	G	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr6	31459024	31459025	chr6:31459025:C:G	rs2596479	C	G	-	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr6	31464347	31464348	chr6:31464348:C:T	rs2284178	C	T	-	Hoxd9.mouse_homeodomain_1	0	1	-	7.212456609225008	6.423571575367866	GCCATAAAG
chr6	31508356	31508357	chr6:31508357:A:G	rs3131635	A	G	a	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr6	31536809	31536810	chr6:31536810:G:T	rs3130057	G	T	T	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr6	31727081	31727082	chr6:31727082:C:T	rs45565837	C	T	C	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr6	31852881	31852882	chr6:31852882:T:C	rs7451017	T	C	C	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr6	32110870	32110871	chr6:32110871:T:G	chr6:32110871:T:G	T	G	T	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr6	32237148	32237149	chr6:32237149:T:C	rs9267907	T	C	C	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr6	32248018	32248019	chr6:32248019:T:G	rs2894239	T	G	T	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr6	32256361	32256362	chr6:32256362:G:A	rs3115569	G	A	g	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr6	32370917	32370918	chr6:32370918:A:G	rs3129943	A	G	A	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr6	32375044	32375045	chr6:32375045:C:G	rs3117108	C	G	N	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr6	32406051	32406052	chr6:32406052:G:T	rs62404576	G	T	g	Hoxd9.mouse_homeodomain_1	2	1	-	7.716978748812629	7.0154228899258175	GACATAAAA
chr6	32413263	32413264	chr6:32413264:C:G	rs6938337	C	G	G	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr6	32473191	32473192	chr6:32473192:G:A	rs9269080	G	A	.	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr6	32591434	32591435	chr6:32591435:A:G	rs75928817	A	G	.	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr6	32591438	32591439	chr6:32591439:A:G	rs9270505	A	G	.	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr6	32623810	32623811	chr6:32623811:A:G	rs9271608	A	G	.	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr6	32623819	32623820	chr6:32623820:T:C	rs9271609	T	C	.	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr6	32623823	32623824	chr6:32623824:C:T	rs9271610	C	T	.	Hoxd9.mouse_homeodomain_1	0	1	+	8.409487817756228	6.514940512447287	CCCATTAAA
chr6	32623831	32623832	chr6:32623832:A:G	rs9271611	A	G	.	Hoxd9.mouse_homeodomain_1	8	1	+	8.409487817756228	6.943160709270972	CCCATTAAA
chr6	32624789	32624790	chr6:32624790:G:A	rs9271655	G	A	.	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr6	32624810	32624811	chr6:32624811:T:C	rs9271658	T	C	.	Hoxd9.mouse_homeodomain_1	4	1	+	8.099252595576761	5.444205950714182	GCCATTAAA
chr6	32630014	32630015	chr6:32630015:A:T	rs2395517	A	T	.	Hoxd9.mouse_homeodomain_1	5	1	-	8.099252595576761	8.678783717710262	GCCATTAAA
chr6	32630034	32630035	chr6:32630035:T:C	rs2395518	T	C	.	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr6	32635458	32635459	chr6:32635459:T:A	rs9272260	T	A	.	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr6	32635464	32635465	chr6:32635465:G:A	rs9272261	G	A	.	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr6	32647588	32647589	chr6:32647589:G:A	rs17612555	G	A	.	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr6	32650111	32650112	chr6:32650112:G:T	rs112984211	G	T	.	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr6	32650112	32650113	chr6:32650113:T:C	rs143513497	T	C	.	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr6	32701139	32701140	chr6:32701140:C:T	rs9275385	C	T	T	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr6	32715875	32715876	chr6:32715876:G:A	rs3104411	G	A	A	Hoxd9.mouse_homeodomain_1	1	1	-	7.241935125048919	5.927133210715912	CCCATACAA
chr6	32719279	32719280	chr6:32719280:G:C	rs28772322	G	C	G	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr6	32719288	32719289	chr6:32719289:A:C	rs28772323	A	C	A	Hoxd9.mouse_homeodomain_1	4	1	-	8.287463081002919	1.445644633672313	CCAATAAAA
chr6	32802704	32802705	chr6:32802705:T:C	rs6899857	T	C	T	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr6	32845234	32845235	chr6:32845235:A:G	rs963946048	A	G	A	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr6	32944849	32944850	chr6:32944850:T:C	rs17220444	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.9772278588234515	6.643149258960959	GCAATAAAA
chr6	33029621	33029622	chr6:33029622:T:C	rs148400013	T	C	T	Hoxd9.mouse_homeodomain_1	7	1	-	8.287463081002919	1.5836371344111884	CCAATAAAA
chr6	33057608	33057609	chr6:33057609:G:A	rs17220829	G	A	G	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr6	33069421	33069422	chr6:33069422:G:C	rs3830065	G	C	G	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr6	33080689	33080690	chr6:33080690:G:T	rs1126513	G	T	G	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr6	33092018	33092019	chr6:33092019:A:G	rs2281389	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	7.889898683853121	6.555820083990628	ACCATAAAA
chr6	33110304	33110305	chr6:33110305:C:T	rs3128932	C	T	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.34470511784777	8.678783717710262	GCCGTAAAA
chr6	33122527	33122528	chr6:33122528:G:A	rs4711317	G	A	g	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr6	33677337	33677338	chr6:33677338:G:T	rs2274197	G	T	G	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr6	33707864	33707865	chr6:33707865:A:G	rs2281829	A	G	A	Hoxd9.mouse_homeodomain_1	5	1	+	7.45645131454733	1.0822615963007745	CCCATAAAC
chr6	33759047	33759048	chr6:33759048:G:T	chr6:33759048:G:T	G	T	G	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr6	33916792	33916793	chr6:33916793:C:A	rs11757618	C	A	C	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr6	34066033	34066034	chr6:34066034:G:A	rs12215053	G	A	G	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr6	34152696	34152697	chr6:34152697:G:A	rs28711104	G	A	G	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr6	34164427	34164428	chr6:34164428:T:C	rs13219419	T	C	T	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr6	34250387	34250388	chr6:34250388:A:G	rs10080749	A	G	A	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr6	34273313	34273314	chr6:34273314:C:A	rs191328422	C	A	C	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr6	34415350	34415351	chr6:34415351:A:T	rs1324894208	A	T	A	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr6	34425858	34425859	chr6:34425859:C:T	rs148469918	C	T	C	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr6	34425870	34425871	chr6:34425871:T:G	rs4713779	T	G	T	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr6	34609551	34609552	chr6:34609552:A:G	rs905162222	A	G	A	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr6	34722932	34722933	chr6:34722933:A:G	rs66926909	A	G	A	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr6	34740083	34740084	chr6:34740084:C:T	rs2814962	C	T	C	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr6	34835448	34835449	chr6:34835449:C:T	rs35078643	C	T	C	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr6	35032328	35032329	chr6:35032329:A:G	rs555608445	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.678783717710262	7.34470511784777	GCCATAAAA
chr6	35035375	35035376	chr6:35035376:T:A	rs62402708	T	A	T	Hoxd9.mouse_homeodomain_1	6	1	-	7.716978748812629	4.827562978782042	GACATAAAA
chr6	35141884	35141885	chr6:35141885:A:G	rs188662108	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	7.889898683853121	6.555820083990628	ACCATAAAA
chr6	35195242	35195243	chr6:35195243:G:T	rs12193946	G	T	G	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr6	35606216	35606217	chr6:35606217:G:A	rs115026707	G	A	a	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr6	35611461	35611462	chr6:35611462:A:C	chr6:35611462:A:C	A	C	A	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr6	35718177	35718178	chr6:35718178:G:A	rs12200498	G	A	G	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr6	35794654	35794655	chr6:35794655:C:T	rs2817015	C	T	C	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr6	36108244	36108245	chr6:36108245:A:G	rs28763974	A	G	A	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr6	36204204	36204205	chr6:36204205:G:T	rs932329072	G	T	G	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr6	36204242	36204243	chr6:36204243:C:T	rs375809112	C	T	C	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr6	36235932	36235933	chr6:36235933:C:T	rs9462164	C	T	C	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr6	36594990	36594991	chr6:36594991:G:A	rs9470342	G	A	G	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr6	36610728	36610729	chr6:36610729:T:C	rs73408383	T	C	C	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr6	36673976	36673977	chr6:36673977:A:C	rs1977172	A	C	C	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr6	36690964	36690965	chr6:36690965:T:C	rs12191972	T	C	T	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr6	36751932	36751933	chr6:36751933:G:A	rs78720743	G	A	G	Hoxd9.mouse_homeodomain_1	1	1	-	7.091711387329735	5.776909472996728	CCCATCAAA
chr6	36751950	36751951	chr6:36751951:G:A	rs13193217	G	A	A	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr6	36964794	36964795	chr6:36964795:T:C	rs1046279	T	C	C	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr6	37029063	37029064	chr6:37029064:A:G	rs708016	A	G	G	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr6	37068922	37068923	chr6:37068923:C:T	rs7770544	C	T	C	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr6	37210985	37210986	chr6:37210986:C:T	rs76448868	C	T	C	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr6	37211009	37211010	chr6:37211010:T:C	rs1150788	T	C	T	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr6	37641680	37641681	chr6:37641681:G:C	rs804830	G	C	C	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr6	37706562	37706563	chr6:37706563:A:G	rs6938061	A	G	G	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr6	38161398	38161399	chr6:38161399:G:A	rs55731063	G	A	G	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr6	38371182	38371183	chr6:38371183:G:A	rs148687572	G	A	G	Hoxd9.mouse_homeodomain_1	0	1	-	8.409487817756228	6.514940512447287	CCCATTAAA
chr6	38405451	38405452	chr6:38405452:C:G	rs9380745	C	G	C	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr6	38613967	38613968	chr6:38613968:G:C	rs1739629	G	C	C	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr6	38720602	38720603	chr6:38720603:G:T	rs75929781	G	T	G	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr6	39119084	39119085	chr6:39119085:A:G	rs114746715	A	G	A	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr6	39180445	39180446	chr6:39180446:G:A	rs186719319	G	A	G	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr6	39180463	39180464	chr6:39180464:C:T	rs13213552	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	+	8.98901893988973	7.094471634580788	CCCATAAAA
chr6	39200397	39200398	chr6:39200398:A:G	rs2815104	A	G	G	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr6	39200575	39200576	chr6:39200576:T:G	rs115674743	T	G	T	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr6	39330108	39330109	chr6:39330109:G:A	rs56370893	G	A	G	Hoxd9.mouse_homeodomain_1	0	1	+	8.678783717710262	7.889898683853121	GCCATAAAA
chr6	39369194	39369195	chr6:39369195:T:C	rs72860024	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.099252595576761	6.765173995714267	GCCATTAAA
chr6	39388661	39388662	chr6:39388662:T:C	rs12175497	T	C	C	Hoxd9.mouse_homeodomain_1	5	1	-	7.522691831404475	1.1485021131579192	CCCATAAAG
chr6	39688671	39688672	chr6:39688672:A:G	rs302570	A	G	G	Hoxd9.mouse_homeodomain_1	8	1	+	8.98901893988973	7.522691831404475	CCCATAAAA
chr6	39772995	39772996	chr6:39772996:A:C	rs12201881	A	C	A	Hoxd9.mouse_homeodomain_1	6	1	+	8.98901893988973	7.241935125048919	CCCATAAAA
chr6	39922472	39922473	chr6:39922473:G:A	rs2475509	G	A	A	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr6	40486446	40486447	chr6:40486447:C:T	rs61228961	C	T	C	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr6	40543302	40543303	chr6:40543303:G:A	rs77125239	G	A	G	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr6	40611862	40611863	chr6:40611863:G:C	rs80310368	G	C	G	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr6	40615112	40615113	chr6:40615113:A:G	rs2494958	A	G	A	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr6	40731992	40731993	chr6:40731993:G:A	rs4400213	G	A	G	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr6	40933161	40933162	chr6:40933162:T:C	rs372966652	T	C	T	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr6	41385179	41385180	chr6:41385180:T:C	rs623514	T	C	C	Hoxd9.mouse_homeodomain_1	6	1	-	7.654940340027237	0.9511143934355059	CCCGTAAAA
chr6	41402758	41402759	chr6:41402759:C:T	rs13194139	C	T	C	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr6	41428549	41428550	chr6:41428550:G:T	rs376521763	G	T	G	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr6	41428550	41428551	chr6:41428551:C:T	rs369456041	C	T	C	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr6	41503650	41503651	chr6:41503651:T:A	rs13212930	T	A	T	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr6	42028270	42028271	chr6:42028271:G:A	rs73428370	G	A	G	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr6	42269612	42269613	chr6:42269613:G:C	rs73733137	G	C	G	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr6	42482653	42482654	chr6:42482654:T:C	rs9462805	T	C	T	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr6	42569466	42569467	chr6:42569467:T:G	rs7762500	T	G	T	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr6	42742345	42742346	chr6:42742346:G:A	rs61296601	G	A	G	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr6	42747735	42747736	chr6:42747736:C:T	rs75651354	C	T	C	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr6	42756618	42756619	chr6:42756619:T:C	rs12195802	T	C	C	Hoxd9.mouse_homeodomain_1	7	1	-	7.9772278588234515	1.2734019122317202	GCAATAAAA
chr6	42980091	42980092	chr6:42980092:C:T	rs12211329	C	T	C	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr6	43069951	43069952	chr6:43069952:T:G	rs73733795	T	G	T	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr6	43171260	43171261	chr6:43171261:A:G	rs530822769	A	G	a	Hoxd9.mouse_homeodomain_1	3	1	+	8.678783717710262	7.34470511784777	GCCATAAAA
chr6	43181248	43181249	chr6:43181249:G:C	rs9395	G	C	G	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr6	43181295	43181296	chr6:43181296:C:T	rs41274924	C	T	C	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr6	43506751	43506752	chr6:43506752:C:T	rs115166774	C	T	C	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr6	43506752	43506753	chr6:43506753:G:A	rs72857289	G	A	G	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr6	43506789	43506790	chr6:43506790:G:T	rs545578654	G	T	G	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr6	43578904	43578905	chr6:43578905:C:T	rs111818017	C	T	C	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr6	43706956	43706957	chr6:43706957:T:C	rs148855758	T	C	T	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr6	43737549	43737550	chr6:43737550:G:A	rs146968212	G	A	G	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr6	43747399	43747400	chr6:43747400:G:A	rs60104351	G	A	G	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr6	43817517	43817518	chr6:43817518:C:T	rs35349911	C	T	C	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr6	43846756	43846757	chr6:43846757:A:T	rs12662203	A	T	A	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr6	43928574	43928575	chr6:43928575:C:A	rs62401230	C	A	C	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr6	44066953	44066954	chr6:44066954:C:A	rs833810	C	A	C	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr6	44156666	44156667	chr6:44156667:A:G	rs112032518	A	G	A	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr6	44223289	44223290	chr6:44223290:G:T	chr6:44223290:G:T	G	T	G	Hoxd9.mouse_homeodomain_1	2	1	-	8.98901893988973	8.287463081002919	CCCATAAAA
chr6	44475292	44475293	chr6:44475293:C:G	rs7748645	C	G	G	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr6	44537096	44537097	chr6:44537097:A:T	rs73734111	A	T	A	Hoxd9.mouse_homeodomain_1	2	1	+	7.9772278588234515	2.1913432600866263	GCAATAAAA
chr6	44556691	44556692	chr6:44556692:A:G	rs4711786	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	7.45645131454733	6.122372714684838	CCCATAAAC
chr6	44564601	44564602	chr6:44564602:G:A	rs118180231	G	A	G	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr6	44630767	44630768	chr6:44630768:C:G	rs111572610	C	G	C	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr6	44675146	44675147	chr6:44675147:C:G	rs9472321	C	G	c	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr6	44932149	44932150	chr6:44932150:A:G	rs79121480	A	G	A	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr6	44969517	44969518	chr6:44969518:C:T	rs494982	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	+	8.027213970992095	6.132666665683155	CACATAAAA
chr6	45188204	45188205	chr6:45188205:A:G	rs184663429	A	G	A	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr6	45481122	45481123	chr6:45481123:C:G	rs12210100	C	G	C	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr6	45495970	45495971	chr6:45495971:G:A	rs1004855567	G	A	G	Hoxd9.mouse_homeodomain_1	2	1	-	8.099252595576761	1.6118121379531245	GCCATTAAA
chr6	45554922	45554923	chr6:45554923:C:A	rs1755056	C	A	C	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr6	45574332	45574333	chr6:45574333:G:C	rs112740302	G	C	G	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr6	45596539	45596540	chr6:45596540:G:T	rs75161916	G	T	.	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr6	45607101	45607102	chr6:45607102:A:G	rs6938489	A	G	.	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr6	45609776	45609777	chr6:45609777:C:A	rs60540355	C	A	A	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr6	45703662	45703663	chr6:45703663:A:G	rs6906753	A	G	G	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr6	45835558	45835559	chr6:45835559:G:A	rs10948260	G	A	G	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr6	45983089	45983090	chr6:45983090:G:T	rs3798267	G	T	G	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr6	46220016	46220017	chr6:46220017:A:T	rs2799355	A	T	T	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr6	46340049	46340050	chr6:46340050:T:A	rs6934148	T	A	A	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr6	46340204	46340205	chr6:46340205:C:T	rs716493	C	T	T	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr6	46771374	46771375	chr6:46771375:C:A	rs9463240	C	A	C	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr6	46919214	46919215	chr6:46919215:T:G	rs10484844	T	G	T	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr6	46919246	46919247	chr6:46919247:G:C	chr6:46919247:G:C	G	C	G	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr6	47160992	47160993	chr6:47160993:A:G	rs9296534	A	G	G	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr6	47288486	47288487	chr6:47288487:G:A	rs58852316	G	A	G	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr6	47298959	47298960	chr6:47298960:A:C	rs2103867	A	C	C	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr6	47299924	47299925	chr6:47299925:A:G	rs933156057	A	G	A	Hoxd9.mouse_homeodomain_1	8	1	+	8.678783717710262	7.212456609225008	GCCATAAAA
chr6	47414427	47414428	chr6:47414428:T:C	rs7763430	T	C	T	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr6	47414518	47414519	chr6:47414519:C:T	rs141001680	C	T	C	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr6	47484222	47484223	chr6:47484223:G:C	rs115297785	G	C	G	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr6	47685133	47685134	chr6:47685134:C:G	rs6900729	C	G	C	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr6	47734543	47734544	chr6:47734544:A:C	rs9349428	A	C	A	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr6	48521275	48521276	chr6:48521276:A:G	rs2586817	A	G	A	Hoxd9.mouse_homeodomain_1	7	1	+	7.075409217893736	0.3715832713020041	CCCGTTAAA
chr6	48526329	48526330	chr6:48526330:A:G	rs1819763	A	G	g	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr6	48827204	48827205	chr6:48827205:C:T	chr6:48827205:C:T	C	T	C	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr6	49084864	49084865	chr6:49084865:C:T	rs12207761	C	T	C	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr6	49123232	49123233	chr6:49123233:A:G	rs4562139	A	G	A	Hoxd9.mouse_homeodomain_1	6	1	+	8.099252595576761	1.3954266489850298	GCCATTAAA
chr6	49523434	49523435	chr6:49523435:C:G	rs184781595	C	G	C	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr6	49772358	49772359	chr6:49772359:T:G	rs921914815	T	G	T	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr6	49781759	49781760	chr6:49781760:G:A	rs2059941	G	A	G	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr6	50271438	50271439	chr6:50271439:T:A	rs79627089	T	A	T	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr6	50610844	50610845	chr6:50610845:A:G	rs280336	A	G	G	Hoxd9.mouse_homeodomain_1	6	1	+	8.027213970992095	1.3233880244003648	CACATAAAA
chr6	50890422	50890423	chr6:50890423:T:C	rs2817340	T	C	T	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr6	50946010	50946011	chr6:50946011:C:G	rs569384	C	G	C	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr6	51018611	51018612	chr6:51018612:G:A	rs75866279	G	A	G	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr6	51086744	51086745	chr6:51086745:A:G	rs2477496	A	G	A	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr6	51360663	51360664	chr6:51360664:A:G	rs1409894	A	G	A	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr6	51805175	51805176	chr6:51805176:T:C	rs9474077	T	C	T	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr6	52239065	52239066	chr6:52239066:T:C	rs11465551	T	C	T	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr6	52263122	52263123	chr6:52263123:G:A	rs17240301	G	A	G	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr6	52263143	52263144	chr6:52263144:T:A	rs1781009	T	A	T	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr6	52372169	52372170	chr6:52372170:G:A	rs17650296	G	A	G	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr6	52399715	52399716	chr6:52399716:C:T	rs6933615	C	T	C	Hoxd9.mouse_homeodomain_1	2	1	+	8.678783717710262	2.1913432600866263	GCCATAAAA
chr6	52636384	52636385	chr6:52636385:G:A	rs13211301	G	A	G	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr6	52685320	52685321	chr6:52685321:C:T	rs9382132	C	T	C	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr6	52779612	52779613	chr6:52779613:T:C	rs149395212	T	C	-	Hoxd9.mouse_homeodomain_1	4	1	+	7.889898683853121	5.234852038990543	ACCATAAAA
chr6	52788781	52788782	chr6:52788782:C:A	rs12200503	C	A	N	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr6	52922169	52922170	chr6:52922170:G:A	rs748189202	G	A	G	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr6	52929876	52929877	chr6:52929877:T:A	rs989988930	T	A	T	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr6	52929906	52929907	chr6:52929907:T:G	rs520870	T	G	T	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr6	53162272	53162273	chr6:53162273:C:T	rs6907165	C	T	C	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr6	53165647	53165648	chr6:53165648:G:A	rs117573289	G	A	G	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr6	53382673	53382674	chr6:53382674:G:A	rs75553765	G	A	G	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr6	53411666	53411667	chr6:53411667:G:A	rs7748351	G	A	G	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr6	53477231	53477232	chr6:53477232:C:T	rs57591604	C	T	T	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr6	53569066	53569067	chr6:53569067:A:G	rs6903466	A	G	G	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr6	53581659	53581660	chr6:53581660:C:T	rs568173	C	T	C	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr6	53614070	53614071	chr6:53614071:A:G	rs10948754	A	G	A	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr6	53832214	53832215	chr6:53832215:T:A	rs4640878	T	A	T	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr6	53959854	53959855	chr6:53959855:G:A	rs79822739	G	A	G	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr6	53962401	53962402	chr6:53962402:C:T	rs763814	C	T	T	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr6	54002358	54002359	chr6:54002359:G:A	rs75102561	G	A	G	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr6	54318640	54318641	chr6:54318641:C:T	rs1340670	C	T	T	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr6	54428462	54428463	chr6:54428463:A:T	rs6458996	A	T	A	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr6	54646929	54646930	chr6:54646930:C:T	rs9474944	C	T	C	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr6	54718590	54718591	chr6:54718591:G:C	rs962307	G	C	C	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr6	54730970	54730971	chr6:54730971:A:G	rs9474980	A	G	A	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr6	54848091	54848092	chr6:54848092:T:G	rs75845634	T	G	T	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr6	54848104	54848105	chr6:54848105:T:G	rs4715486	T	G	G	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr6	54848105	54848106	chr6:54848106:G:C	rs115030888	G	C	G	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr6	55399563	55399564	chr6:55399564:T:C	rs6936510	T	C	C	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr6	55474681	55474682	chr6:55474682:T:C	rs9370429	T	C	C	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr6	55756559	55756560	chr6:55756560:A:T	rs3798847	A	T	A	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr6	55756578	55756579	chr6:55756579:C:T	rs3798846	C	T	C	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr6	55898710	55898711	chr6:55898711:C:T	rs2397194	C	T	C	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr6	56004625	56004626	chr6:56004626:A:C	chr6:56004626:A:C	A	C	A	Hoxd9.mouse_homeodomain_1	3	1	+	7.716978748812629	1.1414706446091483	GACATAAAA
chr6	56051482	56051483	chr6:56051483:G:A	rs763546231	G	A	G	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr6	56210688	56210689	chr6:56210689:G:T	rs1925141	G	T	T	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr6	56594366	56594367	chr6:56594367:A:T	rs11964738	A	T	A	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr6	56715181	56715182	chr6:56715182:A:G	rs145676991	A	G	A	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr6	56803446	56803447	chr6:56803447:A:G	rs71564856	A	G	G	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr6	56953347	56953348	chr6:56953348:G:T	rs9382669	G	T	T	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr6	57013474	57013475	chr6:57013475:T:A	rs56059696	T	A	T	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr6	57216681	57216682	chr6:57216682:C:T	rs112445112	C	T	C	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr6	57258301	57258302	chr6:57258302:T:G	rs565642165	T	G	T	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr6	57283775	57283776	chr6:57283776:T:C	rs1330632	T	C	C	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr6	58419656	58419657	chr6:58419657:G:A	rs7757510	G	A	.	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr6	62167663	62167664	chr6:62167664:C:T	rs9346193	C	T	C	Hoxd9.mouse_homeodomain_1	2	1	+	7.091711387329735	0.6042709297060974	CCCATCAAA
chr6	62512247	62512248	chr6:62512248:G:C	rs9350443	G	C	G	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr6	62524679	62524680	chr6:62524680:G:A	rs9446551	G	A	A	Hoxd9.mouse_homeodomain_1	1	1	-	8.98901893988973	7.674217025556723	CCCATAAAA
chr6	62860668	62860669	chr6:62860669:C:A	rs77847046	C	A	-	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr6	62860681	62860682	chr6:62860682:C:A	rs12665256	C	A	-	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr6	63251786	63251787	chr6:63251787:T:G	rs10943630	T	G	T	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr6	63862725	63862726	chr6:63862726:A:G	rs12205984	A	G	G	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr6	63911242	63911243	chr6:63911243:A:C	rs79189257	A	C	A	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr6	64803417	64803418	chr6:64803418:C:G	rs9452959	C	G	G	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr6	65189512	65189513	chr6:65189513:G:T	rs78193170	G	T	G	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr6	65943002	65943003	chr6:65943003:C:A	rs78317899	C	A	C	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr6	65979528	65979529	chr6:65979529:C:T	rs7752781	C	T	T	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr6	66009703	66009704	chr6:66009704:T:G	rs6899720	T	G	G	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr6	66331638	66331639	chr6:66331639:G:A	rs77234237	G	A	G	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr6	66444036	66444037	chr6:66444037:G:A	rs9294698	G	A	A	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr6	66444058	66444059	chr6:66444059:G:C	rs9294699	G	C	C	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr6	66449198	66449199	chr6:66449199:A:G	rs2137633	A	G	G	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr6	66539183	66539184	chr6:66539184:A:G	rs10806538	A	G	A	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr6	66539209	66539210	chr6:66539210:G:T	rs9354439	G	T	G	Hoxd9.mouse_homeodomain_1	1	1	-	7.241935125048919	6.2801301561512854	CCCATACAA
chr6	66787973	66787974	chr6:66787974:G:A	rs4710626	G	A	A	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr6	66931016	66931017	chr6:66931017:C:T	rs75525399	C	T	C	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr6	67086658	67086659	chr6:67086659:A:G	rs12211273	A	G	A	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr6	68399724	68399725	chr6:68399725:A:G	rs1490625	A	G	A	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr6	68512857	68512858	chr6:68512858:T:C	rs10945116	T	C	T	Hoxd9.mouse_homeodomain_1	5	1	+	8.099252595576761	6.781476165150267	GCCATTAAA
chr6	68676688	68676689	chr6:68676689:G:C	rs2746136	G	C	G	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr6	68703920	68703921	chr6:68703921:C:A	rs118082074	C	A	C	Hoxd9.mouse_homeodomain_1	1	1	+	8.099252595576761	7.137447626679127	GCCATTAAA
chr6	68718613	68718614	chr6:68718614:C:G	rs78529071	C	G	C	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr6	68948357	68948358	chr6:68948358:T:C	rs13193787	T	C	t	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr6	69203063	69203064	chr6:69203064:A:C	chr6:69203064:A:C	A	C	A	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr6	70080708	70080709	chr6:70080709:A:T	rs12193795	A	T	A	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr6	70117756	70117757	chr6:70117757:C:G	rs16868569	C	G	C	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr6	70118750	70118751	chr6:70118751:T:C	rs75266176	T	C	T	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr6	70131564	70131565	chr6:70131565:C:G	rs56149206	C	G	C	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr6	70204364	70204365	chr6:70204365:T:G	rs12192985	T	G	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.212456609225008	0.6369485050215262	GCCATAAAG
chr6	70445855	70445856	chr6:70445856:G:A	rs113870111	G	A	G	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr6	70564445	70564446	chr6:70564446:C:T	rs78569561	C	T	C	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr6	70981374	70981375	chr6:70981375:A:C	rs58141580	A	C	A	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr6	71205100	71205101	chr6:71205101:A:G	rs188999038	A	G	G	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr6	71205101	71205102	chr6:71205102:T:A	rs182126579	T	A	A	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr6	71205134	71205135	chr6:71205135:C:T	rs9455379	C	T	C	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr6	71394475	71394476	chr6:71394476:C:T	rs9364165	C	T	C	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr6	72031632	72031633	chr6:72031633:C:T	rs188811556	C	T	C	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr6	72261629	72261630	chr6:72261630:A:G	rs16882228	A	G	A	Hoxd9.mouse_homeodomain_1	2	1	+	8.287463081002919	5.5210272824374	CCAATAAAA
chr6	72420993	72420994	chr6:72420994:A:G	rs16882378	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	7.889898683853121	6.555820083990628	ACCATAAAA
chr6	72580681	72580682	chr6:72580682:A:T	rs10455268	A	T	A	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr6	72676345	72676346	chr6:72676346:C:T	rs9446734	C	T	T	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr6	72821127	72821128	chr6:72821128:A:G	rs10498884	A	G	A	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr6	73469671	73469672	chr6:73469672:A:G	rs7453831	A	G	g	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr6	73631315	73631316	chr6:73631316:C:T	rs12210126	C	T	C	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr6	73879938	73879939	chr6:73879939:A:G	rs79343326	A	G	A	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr6	74151931	74151932	chr6:74151932:T:C	rs4642430	T	C	T	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr6	74416830	74416831	chr6:74416831:A:G	rs116939080	A	G	A	Hoxd9.mouse_homeodomain_1	5	1	+	7.1462160923678635	0.7720263741213071	GCCATAAAC
chr6	74623211	74623212	chr6:74623212:C:T	rs183590262	C	T	C	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr6	74727283	74727284	chr6:74727284:A:G	rs4708160	A	G	G	Hoxd9.mouse_homeodomain_1	4	1	-	8.027213970992095	5.372167326129518	CACATAAAA
chr6	74936805	74936806	chr6:74936806:A:G	rs4292495	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	7.716978748812629	6.382900148950135	GACATAAAA
chr6	74939266	74939267	chr6:74939267:T:G	rs75075319	T	G	t	Hoxd9.mouse_homeodomain_1	6	1	-	8.287463081002919	6.540379266162109	CCAATAAAA
chr6	74941290	74941291	chr6:74941291:T:C	rs9447376	T	C	C	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr6	75039675	75039676	chr6:75039676:A:G	rs75026337	A	G	.	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr6	75087585	75087586	chr6:75087586:C:T	rs970547	C	T	C	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr6	75230859	75230860	chr6:75230860:C:T	rs73467659	C	T	T	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr6	75563272	75563273	chr6:75563273:C:A	rs6937154	C	A	C	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr6	75602092	75602093	chr6:75602093:T:G	rs879183803	T	G	T	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr6	75750027	75750028	chr6:75750028:A:G	rs13200677	A	G	A	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr6	76000758	76000759	chr6:76000759:C:A	rs76445500	C	A	C	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr6	76000759	76000760	chr6:76000760:C:T	rs79103317	C	T	C	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr6	76221143	76221144	chr6:76221144:G:A	rs4708234	G	A	A	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr6	76442073	76442074	chr6:76442074:C:G	rs55832110	C	G	C	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr6	76442076	76442077	chr6:76442077:T:C	chr6:76442077:T:C	T	C	T	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr6	76821543	76821544	chr6:76821544:C:T	rs2315637	C	T	C	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr6	77296236	77296237	chr6:77296237:T:G	rs1592219	T	G	T	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr6	77301640	77301641	chr6:77301641:T:C	rs9448057	T	C	T	Hoxd9.mouse_homeodomain_1	4	1	+	8.409487817756228	5.7544411728936495	CCCATTAAA
chr6	77417047	77417048	chr6:77417048:C:T	rs548764510	C	T	C	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr6	77457227	77457228	chr6:77457228:G:A	rs2000292	G	A	G	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr6	78275919	78275920	chr6:78275920:G:C	rs818310	G	C	G	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr6	78692733	78692734	chr6:78692734:T:C	rs10943567	T	C	T	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr6	78937645	78937646	chr6:78937646:G:A	rs72902825	G	A	G	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr6	78948397	78948398	chr6:78948398:C:G	rs1283320	C	G	C	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr6	79400603	79400604	chr6:79400604:T:C	rs3846736	T	C	T	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr6	79537500	79537501	chr6:79537501:G:A	rs528911592	G	A	G	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr6	79989551	79989552	chr6:79989552:T:C	rs73747925	T	C	t	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr6	80129534	80129535	chr6:80129535:G:T	rs2505932	G	T	t	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr6	80331560	80331561	chr6:80331561:A:G	rs79918896	A	G	A	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr6	80366621	80366622	chr6:80366622:T:C	rs1572941	T	C	T	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr6	80523514	80523515	chr6:80523515:A:G	rs72901930	A	G	A	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr6	80678132	80678133	chr6:80678133:A:T	rs62424499	A	T	A	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr6	80939926	80939927	chr6:80939927:A:G	rs533393	A	G	G	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr6	80967582	80967583	chr6:80967583:A:G	rs986068	A	G	G	Hoxd9.mouse_homeodomain_1	4	1	-	8.409487817756228	5.7544411728936495	CCCATTAAA
chr6	80991935	80991936	chr6:80991936:A:T	rs9361702	A	T	A	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr6	81024527	81024528	chr6:81024528:A:G	rs71566995	A	G	G	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr6	81093086	81093087	chr6:81093087:G:C	rs310396	G	C	C	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr6	81466124	81466125	chr6:81466125:C:G	rs1923153	C	G	G	Hoxd9.mouse_homeodomain_1	0	1	+	8.287463081002919	7.9772278588234515	CCAATAAAA
chr6	81466144	81466145	chr6:81466145:C:A	rs78715319	C	A	C	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr6	81475743	81475744	chr6:81475744:G:C	rs10943817	G	C	C	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr6	81997336	81997337	chr6:81997337:C:T	rs9361879	C	T	C	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr6	82012217	82012218	chr6:82012218:G:T	rs1935416	G	T	G	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr6	82381358	82381359	chr6:82381359:A:T	rs9344274	A	T	a	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr6	82590268	82590269	chr6:82590269:T:C	rs392198	T	C	T	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr6	82955342	82955343	chr6:82955343:T:C	rs12193379	T	C	C	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr6	82955358	82955359	chr6:82955359:C:T	rs150311155	C	T	T	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr6	83066051	83066052	chr6:83066052:C:T	rs78759971	C	T	C	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr6	83418143	83418144	chr6:83418144:C:A	rs75160985	C	A	C	Hoxd9.mouse_homeodomain_1	8	1	-	7.522691831404475	6.056505815123662	CCCATAAAG
chr6	83678456	83678457	chr6:83678457:T:C	rs755101	T	C	T	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr6	84072419	84072420	chr6:84072420:C:T	rs2497143	C	T	C	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr6	84425271	84425272	chr6:84425272:G:A	rs9294297	G	A	G	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr6	84872353	84872354	chr6:84872354:C:T	rs138794039	C	T	C	Hoxd9.mouse_homeodomain_1	1	1	+	7.45645131454733	6.141649400214323	CCCATAAAC
chr6	85111688	85111689	chr6:85111689:T:C	rs6899539	T	C	C	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr6	85130939	85130940	chr6:85130940:T:A	rs73478387	T	A	T	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr6	85394750	85394751	chr6:85394751:G:C	rs528426	G	C	C	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr6	85436202	85436203	chr6:85436203:T:A	rs62443306	T	A	T	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr6	85464524	85464525	chr6:85464525:A:G	rs150453908	A	G	A	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr6	85644602	85644603	chr6:85644603:T:C	rs140874699	T	C	T	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr6	86516868	86516869	chr6:86516869:A:G	rs4707297	A	G	G	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr6	86729718	86729719	chr6:86729719:C:T	rs529403	C	T	C	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr6	87243960	87243961	chr6:87243961:C:T	rs3846776	C	T	C	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr6	87706851	87706852	chr6:87706852:A:G	rs72906514	A	G	A	Hoxd9.mouse_homeodomain_1	6	1	+	8.287463081002919	1.5836371344111884	CCAATAAAA
chr6	87980945	87980946	chr6:87980946:T:C	rs7452072	T	C	C	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr6	88185414	88185415	chr6:88185415:G:T	rs1884831	G	T	G	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr6	88455696	88455697	chr6:88455697:A:G	rs79506877	A	G	A	Hoxd9.mouse_homeodomain_1	7	1	+	7.091711387329735	0.38788544073800313	CCCATCAAA
chr6	89132136	89132137	chr6:89132137:G:A	rs454760	G	A	G	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr6	89203800	89203801	chr6:89203801:C:T	rs2150817	C	T	T	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr6	89253066	89253067	chr6:89253067:T:G	rs75564527	T	G	G	Hoxd9.mouse_homeodomain_1	8	1	-	7.889898683853121	6.357331058510722	ACCATAAAA
chr6	89357995	89357996	chr6:89357996:T:C	rs1782	T	C	T	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr6	89575266	89575267	chr6:89575267:G:C	rs7744488	G	C	G	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr6	89598090	89598091	chr6:89598091:A:C	rs1054295663	A	C	A	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr6	89877728	89877729	chr6:89877729:G:A	rs190807583	G	A	G	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr6	89877760	89877761	chr6:89877761:C:A	rs660543	C	A	A	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr6	89986840	89986841	chr6:89986841:G:C	rs77811816	G	C	G	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr6	90039142	90039143	chr6:90039143:G:A	rs371855701	G	A	G	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr6	90285312	90285313	chr6:90285313:T:C	rs893196479	T	C	T	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr6	90296314	90296315	chr6:90296315:G:A	chr6:90296315:G:A	G	A	g	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr6	90597218	90597219	chr6:90597219:G:A	rs1928156	G	A	A	Hoxd9.mouse_homeodomain_1	2	1	-	7.716978748812629	1.2295382911889927	GACATAAAA
chr6	91130285	91130286	chr6:91130286:A:G	rs9362832	A	G	A	Hoxd9.mouse_homeodomain_1	8	1	+	8.027213970992095	6.560886862506841	CACATAAAA
chr6	91381754	91381755	chr6:91381755:A:T	rs2325381	A	T	T	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr6	91464414	91464415	chr6:91464415:A:G	rs55913807	A	G	A	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr6	91486649	91486650	chr6:91486650:G:A	rs4142623	G	A	g	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr6	91539648	91539649	chr6:91539649:G:C	rs4707677	G	C	G	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr6	91613946	91613947	chr6:91613947:A:G	rs4269350	A	G	G	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr6	91875158	91875159	chr6:91875159:T:C	rs4707701	T	C	C	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr6	92275090	92275091	chr6:92275091:G:A	rs6925015	G	A	G	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr6	92376498	92376499	chr6:92376499:A:G	rs185443407	A	G	A	Hoxd9.mouse_homeodomain_1	4	1	-	7.091711387329735	4.436664742467157	CCCATCAAA
chr6	93073481	93073482	chr6:93073482:A:G	rs6900522	A	G	G	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr6	93257600	93257601	chr6:93257601:C:T	rs345731	C	T	C	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr6	93574976	93574977	chr6:93574977:A:G	rs116915020	A	G	A	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr6	94269442	94269443	chr6:94269443:A:G	rs9363169	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.678783717710262	7.34470511784777	GCCATAAAA
chr6	95357216	95357217	chr6:95357217:C:T	rs36156302	C	T	C	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr6	95489428	95489429	chr6:95489429:T:C	rs116869309	T	C	T	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr6	95489433	95489434	chr6:95489434:G:A	rs10498996	G	A	G	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr6	96151851	96151852	chr6:96151852:C:T	rs4385319	C	T	C	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr6	96171929	96171930	chr6:96171930:G:A	rs7450606	G	A	A	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr6	96234689	96234690	chr6:96234690:C:A	rs35128104	C	A	C	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr6	96546139	96546140	chr6:96546140:T:A	rs55662452	T	A	T	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr6	96762500	96762501	chr6:96762501:G:C	rs9398198	G	C	G	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr6	96924002	96924003	chr6:96924003:C:T	rs773838066	C	T	C	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr6	96924028	96924029	chr6:96924029:C:A	rs572148618	C	A	C	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr6	96966879	96966880	chr6:96966880:A:G	rs11753834	A	G	A	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr6	97052420	97052421	chr6:97052421:C:T	rs117719946	C	T	C	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr6	97236043	97236044	chr6:97236044:C:T	rs6911290	C	T	T	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr6	97703317	97703318	chr6:97703318:A:C	chr6:97703318:A:C	A	C	A	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr6	98045132	98045133	chr6:98045133:G:T	rs4499937	G	T	G	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr6	98503195	98503196	chr6:98503196:C:T	rs150376	C	T	C	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr6	98788032	98788033	chr6:98788033:T:C	rs9375642	T	C	T	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr6	98843264	98843265	chr6:98843265:T:C	rs66816312	T	C	T	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr6	99133145	99133146	chr6:99133146:A:C	rs6918459	A	C	A	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr6	99270563	99270564	chr6:99270564:T:C	rs221551	T	C	C	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr6	99434598	99434599	chr6:99434599:C:A	rs77750646	C	A	c	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr6	99435260	99435261	chr6:99435261:A:G	rs6570064	A	G	A	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr6	99642498	99642499	chr6:99642499:A:T	rs9321649	A	T	A	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr6	99841507	99841508	chr6:99841508:T:C	rs753882631	T	C	T	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr6	99868286	99868287	chr6:99868287:A:G	rs111669249	A	G	A	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr6	99868289	99868290	chr6:99868290:C:A	rs2894936	C	A	A	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr6	100138768	100138769	chr6:100138769:T:A	rs541859701	T	A	T	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr6	100327191	100327192	chr6:100327192:A:G	rs73760853	A	G	A	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr6	100344899	100344900	chr6:100344900:A:T	rs75565336	A	T	A	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr6	100592943	100592944	chr6:100592944:C:G	rs183961999	C	G	C	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr6	100705251	100705252	chr6:100705252:C:A	rs17060978	C	A	C	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr6	101085321	101085322	chr6:101085322:T:C	rs77135383	T	C	T	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr6	101394099	101394100	chr6:101394100:A:G	rs568994972	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.027213970992095	6.693135371129603	CACATAAAA
chr6	101429625	101429626	chr6:101429626:A:G	rs9404105	A	G	A	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr6	101719398	101719399	chr6:101719399:T:A	rs1222959	T	A	T	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr6	101957340	101957341	chr6:101957341:G:T	rs9404162	G	T	G	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr6	102298211	102298212	chr6:102298212:T:C	rs2994278	T	C	T	Hoxd9.mouse_homeodomain_1	6	1	-	8.027213970992095	1.3233880244003648	CACATAAAA
chr6	102387928	102387929	chr6:102387929:C:A	rs9485684	C	A	A	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr6	102743426	102743427	chr6:102743427:A:G	rs13218485	A	G	G	Hoxd9.mouse_homeodomain_1	4	1	-	8.027213970992095	5.372167326129518	CACATAAAA
chr6	103176932	103176933	chr6:103176933:G:A	rs494028	G	A	a	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr6	103558803	103558804	chr6:103558804:C:T	rs4075135	C	T	C	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr6	103559458	103559459	chr6:103559459:C:G	rs4074221	C	G	C	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr6	103621989	103621990	chr6:103621990:C:T	rs7763417	C	T	A	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr6	103982747	103982748	chr6:103982748:A:T	rs72998583	A	T	A	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr6	103992719	103992720	chr6:103992720:G:A	rs2056929	G	A	A	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr6	104187570	104187571	chr6:104187571:T:G	rs7751106	T	G	T	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr6	104187571	104187572	chr6:104187572:G:C	rs2555709	G	C	G	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr6	104218455	104218456	chr6:104218456:C:T	rs10872795	C	T	c	Hoxd9.mouse_homeodomain_1	0	1	-	8.099252595576761	7.3103675617196195	GCCATTAAA
chr6	104566391	104566392	chr6:104566392:C:T	rs78660494	C	T	c	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr6	104633216	104633217	chr6:104633217:C:T	rs76672836	C	T	c	Hoxd9.mouse_homeodomain_1	0	1	-	7.212456609225008	6.423571575367866	GCCATAAAG
chr6	104686690	104686691	chr6:104686691:A:C	rs999117860	A	C	A	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr6	105042268	105042269	chr6:105042269:A:T	rs160601	A	T	A	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr6	105280131	105280132	chr6:105280132:G:A	rs7760812	G	A	A	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr6	105359945	105359946	chr6:105359946:A:G	rs11752450	A	G	A	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr6	105363520	105363521	chr6:105363521:G:A	rs78663258	G	A	G	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr6	105618470	105618471	chr6:105618471:G:A	rs146081329	G	A	G	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr6	105649798	105649799	chr6:105649799:A:G	rs12192168	A	G	A	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr6	105740942	105740943	chr6:105740943:C:T	rs6568401	C	T	C	Hoxd9.mouse_homeodomain_1	2	1	+	8.027213970992095	1.5397735133684596	CACATAAAA
chr6	105740952	105740953	chr6:105740953:C:G	rs9373810	C	G	C	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr6	105797494	105797495	chr6:105797495:C:G	rs9486189	C	G	C	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr6	105892965	105892966	chr6:105892966:T:G	rs118096398	T	G	T	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr6	106118166	106118167	chr6:106118167:C:T	rs4946726	C	T	T	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr6	106135342	106135343	chr6:106135343:C:A	rs181890994	C	A	C	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr6	106253427	106253428	chr6:106253428:C:T	rs2743564	C	T	C	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr6	106253460	106253461	chr6:106253461:G:T	rs73522642	G	T	T	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr6	106336498	106336499	chr6:106336499:C:T	rs12212059	C	T	C	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr6	106513503	106513504	chr6:106513504:C:T	rs17495053	C	T	C	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr6	106527942	106527943	chr6:106527943:T:C	rs17495623	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.522691831404475	6.188613231541982	CCCATAAAG
chr6	106532979	106532980	chr6:106532980:T:C	rs6908538	T	C	t	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr6	106532980	106532981	chr6:106532981:G:A	rs6928874	G	A	G	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr6	106572313	106572314	chr6:106572314:C:T	rs6940963	C	T	C	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr6	106648977	106648978	chr6:106648978:A:C	rs9486434	A	C	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.027213970992095	1.4517058667886147	CACATAAAA
chr6	106731463	106731464	chr6:106731464:T:C	rs77665351	T	C	T	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr6	107330220	107330221	chr6:107330221:G:A	rs2500576	G	A	A	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr6	107330234	107330235	chr6:107330235:A:G	rs74891097	A	G	A	Hoxd9.mouse_homeodomain_1	4	1	-	8.678783717710262	6.023737072847684	GCCATAAAA
chr6	107474030	107474031	chr6:107474031:A:T	rs117370505	A	T	A	Hoxd9.mouse_homeodomain_1	6	1	+	8.027213970992095	5.137798200961511	CACATAAAA
chr6	107536533	107536534	chr6:107536534:T:C	rs1321553	T	C	C	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr6	107653873	107653874	chr6:107653874:C:T	rs1028498	C	T	T	Hoxd9.mouse_homeodomain_1	2	1	+	7.212456609225008	0.7250161516013711	GCCATAAAG
chr6	107807380	107807381	chr6:107807381:C:T	rs9386667	C	T	C	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr6	107811574	107811575	chr6:107811575:C:T	rs9486724	C	T	C	Hoxd9.mouse_homeodomain_1	1	1	+	7.091711387329735	5.776909472996728	CCCATCAAA
chr6	107811854	107811855	chr6:107811855:G:A	rs11968258	G	A	G	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr6	107818213	107818214	chr6:107818214:T:C	rs7756043	T	C	T	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr6	107965232	107965233	chr6:107965233:C:A	rs140209536	C	A	C	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr6	108261600	108261601	chr6:108261601:C:T	rs116251043	C	T	C	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr6	108340220	108340221	chr6:108340221:A:C	rs9486861	A	C	A	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr6	108574182	108574183	chr6:108574183:C:T	rs2490272	C	T	C	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr6	108599206	108599207	chr6:108599207:C:G	rs774293705	C	G	C	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr6	108676814	108676815	chr6:108676815:A:G	rs768516951	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.099252595576761	6.765173995714267	GCCATTAAA
chr6	108734250	108734251	chr6:108734251:C:G	rs6910534	C	G	c	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr6	108750984	108750985	chr6:108750985:T:C	rs187988332	T	C	T	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr6	109095291	109095292	chr6:109095292:A:G	rs143997739	A	G	A	Hoxd9.mouse_homeodomain_1	8	1	+	8.027213970992095	6.560886862506841	CACATAAAA
chr6	109684582	109684583	chr6:109684583:A:G	rs866784824	A	G	-	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr6	109771696	109771697	chr6:109771697:C:A	rs13207150	C	A	A	Hoxd9.mouse_homeodomain_1	0	1	+	7.091711387329735	5.992591131293127	CCCATCAAA
chr6	110369236	110369237	chr6:110369237:G:A	rs9374165	G	A	A	Hoxd9.mouse_homeodomain_1	3	1	+	7.075409217893736	8.409487817756228	CCCGTTAAA
chr6	110471510	110471511	chr6:110471511:G:A	rs67460788	G	A	G	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr6	110562254	110562255	chr6:110562255:C:A	rs2817794	C	A	C	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr6	110656766	110656767	chr6:110656767:A:G	rs2691171	A	G	G	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr6	110816289	110816290	chr6:110816290:T:G	rs1447245279	T	G	T	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr6	110981274	110981275	chr6:110981275:C:G	rs538077975	C	G	C	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr6	111074421	111074422	chr6:111074422:C:T	rs56351290	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	-	8.678783717710262	7.889898683853121	GCCATAAAA
chr6	111239861	111239862	chr6:111239862:T:C	rs78243804	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.287463081002919	6.953384481140425	CCAATAAAA
chr6	111250934	111250935	chr6:111250935:G:A	rs12208141	G	A	A	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr6	111355309	111355310	chr6:111355310:T:C	rs240995	T	C	C	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr6	111711209	111711210	chr6:111711210:C:T	rs706881	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	-	7.716978748812629	6.928093714955487	GACATAAAA
chr6	111762787	111762788	chr6:111762788:T:C	rs72942156	T	C	T	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr6	111950828	111950829	chr6:111950829:G:A	rs1327198	G	A	G	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr6	111993075	111993076	chr6:111993076:G:C	rs6923573	G	C	G	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr6	112042186	112042187	chr6:112042187:A:C	rs6901360	A	C	A	Hoxd9.mouse_homeodomain_1	8	1	+	7.716978748812629	6.184411123470229	GACATAAAA
chr6	112205130	112205131	chr6:112205131:C:A	rs59596549	C	A	A	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr6	112246316	112246317	chr6:112246317:A:G	rs6921858	A	G	A	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr6	112506604	112506605	chr6:112506605:G:A	rs76320943	G	A	G	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr6	112607663	112607664	chr6:112607664:A:G	rs1276325	A	G	A	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr6	112668006	112668007	chr6:112668007:C:T	rs12194046	C	T	C	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr6	112701587	112701588	chr6:112701588:G:A	rs79871599	G	A	G	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr6	112840192	112840193	chr6:112840193:G:A	rs149861593	G	A	G	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr6	112858618	112858619	chr6:112858619:T:A	rs7453961	T	A	A	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr6	112860003	112860004	chr6:112860004:A:G	rs10499070	A	G	G	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr6	112877131	112877132	chr6:112877132:G:A	rs148094737	G	A	G	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr6	112883271	112883272	chr6:112883272:A:G	rs12214803	A	G	A	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr6	113018950	113018951	chr6:113018951:C:G	rs778175499	C	G	C	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr6	113054374	113054375	chr6:113054375:C:T	rs2347728	C	T	C	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr6	113066011	113066012	chr6:113066012:C:G	rs1110401	C	G	C	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr6	113066017	113066018	chr6:113066018:T:C	rs1106177	T	C	T	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr6	113066353	113066354	chr6:113066354:T:C	rs1317552	T	C	T	Hoxd9.mouse_homeodomain_1	4	1	+	8.409487817756228	5.7544411728936495	CCCATTAAA
chr6	113085008	113085009	chr6:113085009:C:T	rs2347730	C	T	c	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr6	113126651	113126652	chr6:113126652:G:T	rs1406835	G	T	T	Hoxd9.mouse_homeodomain_1	3	1	+	7.654940340027237	6.985537803081085	CCCGTAAAA
chr6	113126657	113126658	chr6:113126658:G:C	rs1406834	G	C	G	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr6	113251355	113251356	chr6:113251356:C:A	rs1066296	C	A	C	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr6	113293289	113293290	chr6:113293290:G:A	rs62421482	G	A	G	Hoxd9.mouse_homeodomain_1	8	1	+	7.522691831404475	8.98901893988973	CCCATAAAG
chr6	113357359	113357360	chr6:113357360:C:T	rs112323332	C	T	G	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr6	113357373	113357374	chr6:113357374:T:C	rs77734112	T	C	T	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr6	113379520	113379521	chr6:113379521:A:G	rs509687	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.98901893988973	7.654940340027237	CCCATAAAA
chr6	113445248	113445249	chr6:113445249:G:C	rs183973383	G	C	G	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr6	113634480	113634481	chr6:113634481:C:T	rs145408207	C	T	C	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr6	113650388	113650389	chr6:113650389:G:A	rs6931833	G	A	G	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr6	113881487	113881488	chr6:113881488:C:T	rs80206633	C	T	C	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr6	114793717	114793718	chr6:114793718:G:C	rs4295513	G	C	G	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr6	114797592	114797593	chr6:114797593:C:T	rs12206935	C	T	C	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr6	115150885	115150886	chr6:115150886:A:G	rs144707509	A	G	A	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr6	115901525	115901526	chr6:115901526:C:G	rs11967815	C	G	C	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr6	116102135	116102136	chr6:116102136:T:C	rs509002	T	C	C	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr6	116218417	116218418	chr6:116218418:T:A	chr6:116218418:T:A	T	A	T	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr6	116280368	116280369	chr6:116280369:A:G	rs6909133	A	G	A	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr6	116529808	116529809	chr6:116529809:C:G	rs1321532	C	G	C	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr6	116545785	116545786	chr6:116545786:A:G	rs17078051	A	G	A	Hoxd9.mouse_homeodomain_1	6	1	+	8.678783717710262	1.9749577711185315	GCCATAAAA
chr6	116668027	116668028	chr6:116668028:T:A	rs1885102	T	A	T	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr6	116928220	116928221	chr6:116928221:A:C	rs595698	A	C	C	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr6	117196635	117196636	chr6:117196636:T:A	rs12194435	T	A	T	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr6	117450113	117450114	chr6:117450114:A:T	rs17635492	A	T	A	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr6	117468750	117468751	chr6:117468751:G:A	rs72961469	G	A	G	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr6	117544764	117544765	chr6:117544765:C:T	rs9320608	C	T	C	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr6	118135506	118135507	chr6:118135507:C:A	rs17334702	C	A	C	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr6	118516104	118516105	chr6:118516105:T:C	rs2213855	T	C	T	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr6	118687660	118687661	chr6:118687661:T:C	rs62423963	T	C	T	Hoxd9.mouse_homeodomain_1	8	1	-	7.241935125048919	5.775608016563663	CCCATACAA
chr6	118718702	118718703	chr6:118718703:A:G	rs9481852	A	G	A	Hoxd9.mouse_homeodomain_1	4	1	-	7.241935125048919	4.5868884801863405	CCCATACAA
chr6	118762740	118762741	chr6:118762741:G:A	rs62424027	G	A	G	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr6	118968544	118968545	chr6:118968545:A:G	rs117968859	A	G	A	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr6	119243877	119243878	chr6:119243878:A:G	rs7753492	A	G	A	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr6	119394464	119394465	chr6:119394465:G:T	rs2144236	G	T	g	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr6	119480417	119480418	chr6:119480418:G:C	rs149061057	G	C	G	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr6	119522141	119522142	chr6:119522142:T:G	rs9489725	T	G	T	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr6	119541368	119541369	chr6:119541369:T:C	rs116132296	T	C	T	Hoxd9.mouse_homeodomain_1	5	1	-	8.678783717710262	2.304593999463707	GCCATAAAA
chr6	119638852	119638853	chr6:119638853:A:G	rs11965268	A	G	A	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr6	119749574	119749575	chr6:119749575:C:T	rs7746982	C	T	T	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr6	119838596	119838597	chr6:119838597:A:G	rs1360253	A	G	G	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr6	119881878	119881879	chr6:119881879:A:G	rs9387690	A	G	A	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr6	120041017	120041018	chr6:120041018:G:C	rs9398542	G	C	C	Hoxd9.mouse_homeodomain_1	2	1	-	8.027213970992095	4.559222313539767	CACATAAAA
chr6	120522624	120522625	chr6:120522625:C:T	rs9489977	C	T	C	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr6	120828683	120828684	chr6:120828684:T:C	rs78603894	T	C	T	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr6	121161999	121162000	chr6:121162000:C:T	rs28877073	C	T	C	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr6	121608707	121608708	chr6:121608708:T:C	rs13204177	T	C	T	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr6	121881162	121881163	chr6:121881163:T:C	rs183770692	T	C	T	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr6	121960043	121960044	chr6:121960044:C:T	rs59070244	C	T	C	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr6	121992411	121992412	chr6:121992412:G:A	rs2679672	G	A	G	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr6	122199026	122199027	chr6:122199027:G:A	rs6569252	G	A	A	Hoxd9.mouse_homeodomain_1	2	1	-	7.716978748812629	1.2295382911889927	GACATAAAA
chr6	122280367	122280368	chr6:122280368:C:G	rs9401502	C	G	C	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr6	122280376	122280377	chr6:122280377:T:A	rs786120	T	A	T	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr6	122339795	122339796	chr6:122339796:T:A	rs12206796	T	A	T	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr6	122353083	122353084	chr6:122353084:C:T	rs9490427	C	T	C	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr6	122390630	122390631	chr6:122390631:G:A	rs137862583	G	A	G	Hoxd9.mouse_homeodomain_1	0	1	-	8.409487817756228	6.514940512447287	CCCATTAAA
chr6	122393666	122393667	chr6:122393667:T:G	rs72974475	T	G	T	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr6	122472278	122472279	chr6:122472279:C:T	rs79558139	C	T	C	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr6	122472280	122472281	chr6:122472281:C:T	rs76639064	C	T	C	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr6	122630997	122630998	chr6:122630998:A:G	rs2815583	A	G	A	Hoxd9.mouse_homeodomain_1	4	1	-	7.716978748812629	5.061932103950051	GACATAAAA
chr6	122736906	122736907	chr6:122736907:T:C	rs12211632	T	C	T	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr6	122917562	122917563	chr6:122917563:G:C	rs7753920	G	C	G	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr6	122968891	122968892	chr6:122968892:G:A	rs7454430	G	A	A	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr6	123035334	123035335	chr6:123035335:C:T	rs139909260	C	T	C	Hoxd9.mouse_homeodomain_1	6	1	+	7.241935125048919	6.099603169859144	CCCATACAA
chr6	123393618	123393619	chr6:123393619:C:T	rs41284430	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	-	7.9772278588234515	7.188342824966311	GCAATAAAA
chr6	123462398	123462399	chr6:123462399:G:A	rs7755304	G	A	G	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr6	123547846	123547847	chr6:123547847:C:T	rs6905496	C	T	T	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr6	123661076	123661077	chr6:123661077:A:G	rs6906122	A	G	G	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr6	123806097	123806098	chr6:123806098:T:G	rs342608	T	G	T	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr6	123811749	123811750	chr6:123811750:A:T	rs4897531	A	T	T	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr6	123997337	123997338	chr6:123997338:G:A	chr6:123997338:G:A	G	A	G	Hoxd9.mouse_homeodomain_1	8	1	-	7.1462160923678635	5.746270592944195	GCCATAAAC
chr6	124697956	124697957	chr6:124697957:G:A	rs111388025	G	A	G	Hoxd9.mouse_homeodomain_1	2	1	-	7.091711387329735	0.6042709297060974	CCCATCAAA
chr6	124718401	124718402	chr6:124718402:A:G	rs6923037	A	G	A	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr6	124796174	124796175	chr6:124796175:A:C	rs545714987	A	C	A	Hoxd9.mouse_homeodomain_1	5	1	+	8.678783717710262	6.781476165150267	GCCATAAAA
chr6	124971765	124971766	chr6:124971766:A:T	rs62431250	A	T	A	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr6	125077555	125077556	chr6:125077556:C:T	rs9491304	C	T	C	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr6	125751706	125751707	chr6:125751707:C:G	rs2875881	C	G	G	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr6	125751710	125751711	chr6:125751711:C:G	rs112780587	C	G	C	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr6	126144282	126144283	chr6:126144283:A:G	rs542820468	A	G	A	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr6	126188395	126188396	chr6:126188396:G:A	rs9491574	G	A	G	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr6	126784346	126784347	chr6:126784347:A:G	rs9401908	A	G	A	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr6	126784383	126784384	chr6:126784384:G:A	rs9398816	G	A	G	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr6	126888537	126888538	chr6:126888538:G:C	rs6918236	G	C	C	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr6	127176618	127176619	chr6:127176619:T:C	rs7771990	T	C	C	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr6	127299724	127299725	chr6:127299725:A:T	rs761842	A	T	A	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr6	127342475	127342476	chr6:127342476:A:T	chr6:127342476:A:T	A	T	A	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr6	127342476	127342477	chr6:127342477:A:C	chr6:127342477:A:C	A	C	A	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr6	127376872	127376873	chr6:127376873:T:C	rs1543432	T	C	C	Hoxd9.mouse_homeodomain_1	4	1	+	7.241935125048919	4.5868884801863405	CCCATACAA
chr6	127577159	127577160	chr6:127577160:C:T	rs9388590	C	T	C	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr6	127704304	127704305	chr6:127704305:A:C	rs6918110	A	C	C	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr6	127704305	127704306	chr6:127704306:G:A	rs6918575	G	A	A	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr6	128067928	128067929	chr6:128067929:T:C	rs4897243	T	C	C	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr6	128572388	128572389	chr6:128572389:A:T	rs12526667	A	T	T	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr6	128704577	128704578	chr6:128704578:T:C	rs6935888	T	C	t	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr6	128725110	128725111	chr6:128725111:A:G	rs76572639	A	G	G	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr6	128738315	128738316	chr6:128738316:T:C	rs9492066	T	C	T	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr6	128746641	128746642	chr6:128746642:A:G	rs117675975	A	G	A	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr6	128807508	128807509	chr6:128807509:C:T	rs2808127	C	T	T	Hoxd9.mouse_homeodomain_1	0	1	-	8.099252595576761	7.3103675617196195	GCCATTAAA
chr6	128993603	128993604	chr6:128993604:T:C	rs9398891	T	C	T	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr6	129183686	129183687	chr6:129183687:G:C	chr6:129183687:G:C	G	C	G	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr6	129206388	129206389	chr6:129206389:G:A	rs3778132	G	A	A	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr6	129252869	129252870	chr6:129252870:T:G	rs7754620	T	G	G	Hoxd9.mouse_homeodomain_1	6	1	-	8.027213970992095	6.2801301561512854	CACATAAAA
chr6	129365004	129365005	chr6:129365005:G:A	rs9388696	G	A	g	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr6	129394676	129394677	chr6:129394677:C:T	rs6914003	C	T	C	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr6	129417420	129417421	chr6:129417421:G:A	rs10872339	G	A	G	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr6	129612653	129612654	chr6:129612654:A:C	rs150416108	A	C	A	Hoxd9.mouse_homeodomain_1	5	1	+	8.027213970992095	6.1299064184321015	CACATAAAA
chr6	129760361	129760362	chr6:129760362:C:T	rs35041292	C	T	C	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr6	129765018	129765019	chr6:129765019:C:G	rs73776383	C	G	C	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr6	129780733	129780734	chr6:129780734:C:T	rs10484280	C	T	C	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr6	129780792	129780793	chr6:129780793:T:G	rs4897342	T	G	G	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr6	129895785	129895786	chr6:129895786:G:A	rs9388749	G	A	G	Hoxd9.mouse_homeodomain_1	0	1	+	8.678783717710262	7.889898683853121	GCCATAAAA
chr6	129958986	129958987	chr6:129958987:G:A	rs117505374	G	A	G	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr6	130046850	130046851	chr6:130046851:C:T	rs34051306	C	T	c	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr6	130132696	130132697	chr6:130132697:C:T	rs3777428	C	T	T	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr6	130229903	130229904	chr6:130229904:G:A	rs117843521	G	A	G	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr6	130308017	130308018	chr6:130308018:G:A	rs62433915	G	A	G	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr6	130437977	130437978	chr6:130437978:C:G	rs10456986	C	G	G	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr6	130525745	130525746	chr6:130525746:C:T	rs17801702	C	T	C	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr6	130749785	130749786	chr6:130749786:C:T	chr6:130749786:C:T	C	T	C	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr6	130815951	130815952	chr6:130815952:C:T	rs9402283	C	T	C	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr6	130966017	130966018	chr6:130966018:T:C	rs117807014	T	C	T	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr6	131103984	131103985	chr6:131103985:T:C	rs117828911	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.45645131454733	6.122372714684838	CCCATAAAC
chr6	131255486	131255487	chr6:131255487:C:T	rs147435365	C	T	C	Hoxd9.mouse_homeodomain_1	2	1	+	7.091711387329735	0.6042709297060974	CCCATCAAA
chr6	131255497	131255498	chr6:131255498:A:C	rs140672862	A	C	A	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr6	131925207	131925208	chr6:131925208:G:T	rs952653	G	T	G	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr6	132016820	132016821	chr6:132016821:T:C	rs2022388	T	C	T	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr6	132225402	132225403	chr6:132225403:T:C	rs6569781	T	C	C	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr6	132484012	132484013	chr6:132484013:C:T	rs9483463	C	T	T	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr6	132530615	132530616	chr6:132530616:A:C	rs565027124	A	C	A	Hoxd9.mouse_homeodomain_1	7	1	+	7.1462160923678635	4.256800322337277	GCCATAAAC
chr6	132791830	132791831	chr6:132791831:G:A	rs118117902	G	A	G	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr6	132961832	132961833	chr6:132961833:T:C	rs77720748	T	C	T	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr6	133131285	133131286	chr6:133131286:A:G	rs3904628	A	G	A	Hoxd9.mouse_homeodomain_1	4	1	-	7.716978748812629	5.061932103950051	GACATAAAA
chr6	133186268	133186269	chr6:133186269:A:G	rs9493554	A	G	G	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr6	133197986	133197987	chr6:133197987:G:C	rs507449	G	C	G	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr6	133398053	133398054	chr6:133398054:A:G	rs180742365	A	G	A	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr6	133431939	133431940	chr6:133431940:A:G	rs3777854	A	G	A	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr6	133683145	133683146	chr6:133683146:C:A	rs73557137	C	A	C	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr6	133756331	133756332	chr6:133756332:C:T	rs7753057	C	T	T	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr6	133756332	133756333	chr6:133756333:C:T	rs78809568	C	T	C	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr6	133777045	133777046	chr6:133777046:T:C	rs12204363	T	C	C	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr6	133816325	133816326	chr6:133816326:G:T	rs1311797357	G	T	G	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr6	134023324	134023325	chr6:134023325:C:G	rs9389130	C	G	G	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr6	134023329	134023330	chr6:134023330:G:A	rs2627232	G	A	A	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr6	134174238	134174239	chr6:134174239:C:T	rs1311897493	C	T	C	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr6	134289091	134289092	chr6:134289092:T:C	rs9373089	T	C	T	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr6	134295810	134295811	chr6:134295811:A:G	rs4896039	A	G	G	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr6	134306146	134306147	chr6:134306147:C:T	rs13196672	C	T	C	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr6	134426923	134426924	chr6:134426924:G:A	rs59511533	G	A	G	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr6	134707245	134707246	chr6:134707246:C:T	rs79025252	C	T	C	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr6	134707711	134707712	chr6:134707712:G:A	rs6569967	G	A	A	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr6	134853244	134853245	chr6:134853245:T:A	rs143806858	T	A	T	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr6	134939022	134939023	chr6:134939023:C:T	rs185119184	C	T	C	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr6	135067413	135067414	chr6:135067414:G:A	rs60401741	G	A	G	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr6	135440094	135440095	chr6:135440095:A:C	rs2757643	A	C	A	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr6	135605724	135605725	chr6:135605725:A:G	rs4896156	A	G	G	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr6	135877455	135877456	chr6:135877456:C:T	rs6570048	C	T	C	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr6	136421996	136421997	chr6:136421997:G:A	rs2076193	G	A	G	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr6	136790288	136790289	chr6:136790289:G:A	rs17065625	G	A	g	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr6	136959524	136959525	chr6:136959525:A:G	rs115891917	A	G	A	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr6	136989593	136989594	chr6:136989594:G:T	rs139079194	G	T	G	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr6	137283975	137283976	chr6:137283976:C:T	rs17066279	C	T	C	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr6	137334320	137334321	chr6:137334321:A:T	rs3850213	A	T	A	Hoxd9.mouse_homeodomain_1	7	1	+	7.9772278588234515	6.230144043982641	GCAATAAAA
chr6	137342887	137342888	chr6:137342888:G:T	rs115343794	G	T	G	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr6	137389487	137389488	chr6:137389488:G:A	rs117473248	G	A	G	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr6	137391347	137391348	chr6:137391348:A:G	rs9321598	A	G	G	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr6	137487649	137487650	chr6:137487650:G:A	rs734669	G	A	G	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr6	137512918	137512919	chr6:137512919:T:C	rs10428802	T	C	C	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr6	137653497	137653498	chr6:137653498:C:T	rs2090108	C	T	C	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr6	137968315	137968316	chr6:137968316:T:C	rs934603804	T	C	T	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr6	138308596	138308597	chr6:138308597:G:A	rs113382385	G	A	G	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr6	138478269	138478270	chr6:138478270:C:T	rs72973301	C	T	C	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr6	138645076	138645077	chr6:138645077:A:G	rs6570248	A	G	G	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr6	138773217	138773218	chr6:138773218:T:C	rs2273509	T	C	T	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr6	138833887	138833888	chr6:138833888:A:G	rs76478337	A	G	A	Hoxd9.mouse_homeodomain_1	5	1	+	8.678783717710262	2.304593999463707	GCCATAAAA
chr6	138943792	138943793	chr6:138943793:T:G	rs6899737	T	G	G	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr6	139093776	139093777	chr6:139093777:G:A	rs9321699	G	A	G	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr6	139254714	139254715	chr6:139254715:C:T	rs4534002	C	T	T	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr6	139324533	139324534	chr6:139324534:T:G	rs13199562	T	G	T	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr6	139469552	139469553	chr6:139469553:G:A	rs62440874	G	A	G	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr6	139763059	139763060	chr6:139763060:T:C	rs73775688	T	C	T	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr6	140059328	140059329	chr6:140059329:G:A	rs10434888	G	A	G	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr6	140281552	140281553	chr6:140281553:C:T	rs78453922	C	T	C	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr6	140546807	140546808	chr6:140546808:T:G	rs117894763	T	G	T	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr6	140731999	140732000	chr6:140732000:G:C	rs2460957	G	C	G	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr6	140784847	140784848	chr6:140784848:C:G	rs141866922	C	G	C	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr6	140830026	140830027	chr6:140830027:A:G	rs669528	A	G	G	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr6	140830034	140830035	chr6:140830035:A:C	rs668256	A	C	A	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr6	141096770	141096771	chr6:141096771:C:T	rs6932275	C	T	C	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr6	141096797	141096798	chr6:141096798:G:T	rs2633953	G	T	G	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr6	141181442	141181443	chr6:141181443:A:G	rs11968269	A	G	A	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr6	141266365	141266366	chr6:141266366:G:T	chr6:141266366:G:T	G	T	G	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr6	141841544	141841545	chr6:141841545:A:G	rs13196217	A	G	A	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr6	142009691	142009692	chr6:142009692:T:C	rs148922275	T	C	T	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr6	142301347	142301348	chr6:142301348:C:T	rs77291653	C	T	T	Hoxd9.mouse_homeodomain_1	2	1	+	7.075409217893736	0.5879687602700975	CCCGTTAAA
chr6	142301353	142301354	chr6:142301354:A:C	rs9496329	A	C	C	Hoxd9.mouse_homeodomain_1	8	1	+	7.075409217893736	5.542841592551335	CCCGTTAAA
chr6	142413975	142413976	chr6:142413976:T:C	rs529105734	T	C	T	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr6	142735418	142735419	chr6:142735419:T:C	rs9390022	T	C	T	Hoxd9.mouse_homeodomain_1	4	1	+	7.091711387329735	4.436664742467157	CCCATCAAA
chr6	142871518	142871519	chr6:142871519:T:C	rs62432360	T	C	T	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr6	142907025	142907026	chr6:142907026:G:A	rs6570533	G	A	A	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr6	142907441	142907442	chr6:142907442:A:G	rs9403419	A	G	G	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr6	142927767	142927768	chr6:142927768:C:G	rs114002170	C	G	C	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr6	143111080	143111081	chr6:143111081:T:G	rs1001473883	T	G	T	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr6	143200304	143200305	chr6:143200305:A:G	rs7745568	A	G	G	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr6	143236561	143236562	chr6:143236562:C:T	rs4896628	C	T	T	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr6	143293776	143293777	chr6:143293777:C:T	rs11753058	C	T	C	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr6	143358574	143358575	chr6:143358575:A:G	rs9321902	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	7.716978748812629	6.382900148950135	GACATAAAA
chr6	143361486	143361487	chr6:143361487:C:T	rs9403489	C	T	C	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr6	143740086	143740087	chr6:143740087:G:A	rs72556977	G	A	G	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr6	144149878	144149879	chr6:144149879:C:T	rs77953163	C	T	T	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr6	144269156	144269157	chr6:144269157:A:G	rs7746497	A	G	A	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr6	144543570	144543571	chr6:144543571:G:A	rs77385266	G	A	G	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr6	144627591	144627592	chr6:144627592:C:A	rs12210995	C	A	C	Hoxd9.mouse_homeodomain_1	1	1	+	8.409487817756228	7.447682848858594	CCCATTAAA
chr6	144697002	144697003	chr6:144697003:A:G	rs1534439	A	G	G	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr6	144778357	144778358	chr6:144778358:A:G	rs9390219	A	G	A	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr6	144868003	144868004	chr6:144868004:C:T	rs7767470	C	T	t	Hoxd9.mouse_homeodomain_1	2	1	+	8.027213970992095	1.5397735133684596	CACATAAAA
chr6	144868004	144868005	chr6:144868005:A:G	rs7767330	A	G	g	Hoxd9.mouse_homeodomain_1	3	1	+	8.027213970992095	6.693135371129603	CACATAAAA
chr6	145035199	145035200	chr6:145035200:A:G	rs9376892	A	G	G	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr6	145279651	145279652	chr6:145279652:C:A	rs557970	C	A	C	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr6	145393367	145393368	chr6:145393368:A:C	rs73785028	A	C	A	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr6	145518030	145518031	chr6:145518031:T:G	rs17724623	T	G	T	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr6	145823322	145823323	chr6:145823323:G:A	rs77598670	G	A	G	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr6	145888286	145888287	chr6:145888287:A:C	rs117046091	A	C	A	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr6	146023887	146023888	chr6:146023888:A:G	rs2777476	A	G	G	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr6	146023909	146023910	chr6:146023910:A:C	rs2814864	A	C	C	Hoxd9.mouse_homeodomain_1	5	1	-	8.409487817756228	2.6148292216431743	CCCATTAAA
chr6	146866100	146866101	chr6:146866101:T:C	rs6937015	T	C	C	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr6	146868830	146868831	chr6:146868831:T:C	rs9390434	T	C	T	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr6	147734193	147734194	chr6:147734194:G:T	rs191785824	G	T	G	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr6	147882752	147882753	chr6:147882753:G:A	rs12192701	G	A	A	Hoxd9.mouse_homeodomain_1	0	1	+	8.678783717710262	7.889898683853121	GCCATAAAA
chr6	148104189	148104190	chr6:148104190:G:A	rs9399636	G	A	G	Hoxd9.mouse_homeodomain_1	0	1	-	8.98901893988973	7.094471634580788	CCCATAAAA
chr6	148520615	148520616	chr6:148520616:T:C	rs1147857	T	C	T	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr6	148648907	148648908	chr6:148648908:T:C	rs13205486	T	C	T	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr6	148700823	148700824	chr6:148700824:G:A	rs6919117	G	A	G	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr6	148760960	148760961	chr6:148760961:G:A	rs17645337	G	A	G	Hoxd9.mouse_homeodomain_1	3	1	+	7.654940340027237	8.98901893988973	CCCGTAAAA
chr6	148856420	148856421	chr6:148856421:G:A	rs73003171	G	A	G	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr6	148869898	148869899	chr6:148869899:C:G	chr6:148869899:C:G	C	G	C	Hoxd9.mouse_homeodomain_1	5	1	+	7.091711387329735	2.6148292216431743	CCCATCAAA
chr6	148912260	148912261	chr6:148912261:G:C	rs4897071	G	C	G	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr6	148913134	148913135	chr6:148913135:T:G	rs9399670	T	G	G	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr6	148935302	148935303	chr6:148935303:A:G	rs17666460	A	G	A	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr6	149011997	149011998	chr6:149011998:A:G	rs9390651	A	G	A	Hoxd9.mouse_homeodomain_1	5	1	+	7.1462160923678635	0.7720263741213071	GCCATAAAC
chr6	149094467	149094468	chr6:149094468:G:A	rs10457842	G	A	A	Hoxd9.mouse_homeodomain_1	3	1	+	7.654940340027237	8.98901893988973	CCCGTAAAA
chr6	149113974	149113975	chr6:149113975:T:C	rs7772697	T	C	C	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr6	149123122	149123123	chr6:149123123:G:T	rs74735621	G	T	T	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr6	149243311	149243312	chr6:149243312:C:T	rs9485361	C	T	T	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr6	149888580	149888581	chr6:149888581:C:G	rs2342767	C	G	C	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr6	149989979	149989980	chr6:149989980:G:A	rs9479339	G	A	A	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr6	150303817	150303818	chr6:150303818:T:A	rs59245770	T	A	T	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr6	150330763	150330764	chr6:150330764:G:A	rs1591830	G	A	A	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr6	150362841	150362842	chr6:150362842:A:G	rs7738727	A	G	G	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr6	150427994	150427995	chr6:150427995:G:A	rs147947308	G	A	G	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr6	150436159	150436160	chr6:150436160:T:C	rs6557517	T	C	C	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr6	150490472	150490473	chr6:150490473:G:A	rs12198944	G	A	G	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr6	150587723	150587724	chr6:150587724:T:C	rs4242305	T	C	C	Hoxd9.mouse_homeodomain_1	4	1	+	7.1462160923678635	4.491169447505284	GCCATAAAC
chr6	150623387	150623388	chr6:150623388:T:G	rs967484219	T	G	T	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr6	150623406	150623407	chr6:150623407:C:A	rs12189916	C	A	C	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr6	150623424	150623425	chr6:150623425:C:T	rs73002188	C	T	C	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr6	150641680	150641681	chr6:150641681:G:A	rs34751413	G	A	G	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr6	150668295	150668296	chr6:150668296:A:G	rs192848527	A	G	G	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr6	150668301	150668302	chr6:150668302:T:G	rs185267476	T	G	T	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr6	150668991	150668992	chr6:150668992:A:G	rs185172259	A	G	A	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr6	150756532	150756533	chr6:150756533:G:A	rs3734413	G	A	G	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr6	150756538	150756539	chr6:150756539:T:A	rs77703499	T	A	T	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr6	150814248	150814249	chr6:150814249:A:G	rs79102053	A	G	A	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr6	150814703	150814704	chr6:150814704:C:T	rs75273495	C	T	t	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr6	150876571	150876572	chr6:150876572:T:C	rs778428855	T	C	T	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr6	150876576	150876577	chr6:150876577:T:C	rs76827247	T	C	T	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr6	150876594	150876595	chr6:150876595:A:G	rs2073066	A	G	G	Hoxd9.mouse_homeodomain_1	3	1	+	7.1462160923678635	5.81213749250537	GCCATAAAC
chr6	150880438	150880439	chr6:150880439:A:G	rs4869952	A	G	G	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr6	150915307	150915308	chr6:150915308:G:A	rs1180419112	G	A	G	Hoxd9.mouse_homeodomain_1	0	1	-	8.027213970992095	6.132666665683155	CACATAAAA
chr6	150933059	150933060	chr6:150933060:C:T	rs942617583	C	T	C	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr6	150978919	150978920	chr6:150978920:T:G	rs569110	T	G	T	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr6	151060075	151060076	chr6:151060076:C:T	rs147917720	C	T	C	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr6	151061373	151061374	chr6:151061374:G:A	rs118103744	G	A	g	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr6	151072120	151072121	chr6:151072121:G:A	rs2346514	G	A	G	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr6	151082011	151082012	chr6:151082012:G:A	rs9371494	G	A	A	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr6	151101799	151101800	chr6:151101800:G:A	rs7543	G	A	a	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr6	151114818	151114819	chr6:151114819:C:T	rs6923696	C	T	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.075409217893736	8.409487817756228	CCCGTTAAA
chr6	151257722	151257723	chr6:151257723:G:A	rs12201599	G	A	G	Hoxd9.mouse_homeodomain_1	1	1	-	8.678783717710262	7.363981803377255	GCCATAAAA
chr6	151691805	151691806	chr6:151691806:G:T	rs182725227	G	T	G	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr6	151691820	151691821	chr6:151691821:A:G	rs3020334	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	7.889898683853121	6.555820083990628	ACCATAAAA
chr6	151692087	151692088	chr6:151692088:G:T	rs3020335	G	T	T	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr6	151962322	151962323	chr6:151962323:A:C	rs985191	A	C	A	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr6	152035084	152035085	chr6:152035085:T:C	rs2982708	T	C	T	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr6	152035101	152035102	chr6:152035102:T:G	rs3020427	T	G	T	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr6	152052176	152052177	chr6:152052177:G:A	rs6557195	G	A	A	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr6	152087523	152087524	chr6:152087524:G:A	rs9322356	G	A	A	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr6	152702690	152702691	chr6:152702691:A:C	rs2078104	A	C	A	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr6	152816485	152816486	chr6:152816486:A:G	rs311326	A	G	A	Hoxd9.mouse_homeodomain_1	8	1	+	8.027213970992095	6.560886862506841	CACATAAAA
chr6	152983452	152983453	chr6:152983453:C:T	rs2073262	C	T	C	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr6	153030776	153030777	chr6:153030777:A:G	rs1292828	A	G	G	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr6	153118926	153118927	chr6:153118927:T:C	rs6901126	T	C	T	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr6	153425187	153425188	chr6:153425188:G:A	rs539006443	G	A	g	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr6	153537888	153537889	chr6:153537889:C:A	rs1321301	C	A	C	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr6	153778483	153778484	chr6:153778484:T:C	rs1892361	T	C	T	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr6	153813271	153813272	chr6:153813272:G:C	rs60244568	G	C	G	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr6	153942403	153942404	chr6:153942404:A:G	rs75196655	A	G	A	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr6	153962073	153962074	chr6:153962074:C:T	rs647303	C	T	T	Hoxd9.mouse_homeodomain_1	0	1	+	8.027213970992095	6.132666665683155	CACATAAAA
chr6	154154617	154154618	chr6:154154618:T:C	chr6:154154618:T:C	T	C	T	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr6	154154619	154154620	chr6:154154620:C:G	rs958027745	C	G	C	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr6	154430825	154430826	chr6:154430826:G:A	rs6929931	G	A	A	Hoxd9.mouse_homeodomain_1	1	1	-	7.212456609225008	5.897654694892	GCCATAAAG
chr6	154480718	154480719	chr6:154480719:G:A	rs9479877	G	A	G	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr6	154613750	154613751	chr6:154613751:T:C	rs9479901	T	C	T	Hoxd9.mouse_homeodomain_1	5	1	-	7.889898683853121	1.5157089656065659	ACCATAAAA
chr6	154993253	154993254	chr6:154993254:A:G	rs55748715	A	G	G	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr6	154999114	154999115	chr6:154999115:A:G	rs76884902	A	G	A	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr6	155117227	155117228	chr6:155117228:G:A	rs73573795	G	A	G	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr6	155164270	155164271	chr6:155164271:G:A	rs9322502	G	A	A	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr6	155327850	155327851	chr6:155327851:C:A	rs75050710	C	A	C	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr6	155435432	155435433	chr6:155435433:T:C	rs231960	T	C	C	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr6	155646900	155646901	chr6:155646901:C:T	rs10499302	C	T	C	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr6	155694639	155694640	chr6:155694640:A:G	rs920928311	A	G	A	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr6	155829814	155829815	chr6:155829815:T:C	rs4286797	T	C	C	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr6	155939290	155939291	chr6:155939291:A:C	rs1038280332	A	C	A	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr6	155986535	155986536	chr6:155986536:C:T	rs4629695	C	T	C	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr6	155986553	155986554	chr6:155986554:T:G	rs4534000	T	G	T	Hoxd9.mouse_homeodomain_1	7	1	-	8.027213970992095	5.137798200961511	CACATAAAA
chr6	156016340	156016341	chr6:156016341:A:C	rs143935053	A	C	A	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr6	156193720	156193721	chr6:156193721:C:T	rs7750317	C	T	T	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr6	156261060	156261061	chr6:156261061:T:C	rs12661043	T	C	T	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr6	156379681	156379682	chr6:156379682:G:A	rs2819083	G	A	A	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr6	156543677	156543678	chr6:156543678:C:T	rs2045137	C	T	C	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr6	156628942	156628943	chr6:156628943:T:A	rs2026602	T	A	T	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr6	156648397	156648398	chr6:156648398:A:G	rs1246183	A	G	-	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr6	156686662	156686663	chr6:156686663:G:A	chr6:156686663:G:A	G	A	G	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr6	156779926	156779927	chr6:156779927:G:T	rs117079245	G	T	G	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr6	157067480	157067481	chr6:157067481:G:A	rs9480424	G	A	G	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr6	157144983	157144984	chr6:157144984:A:G	rs6557533	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.287463081002919	6.953384481140425	CCAATAAAA
chr6	157230064	157230065	chr6:157230065:C:T	rs9406311	C	T	T	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr6	157364940	157364941	chr6:157364941:A:G	rs142616878	A	G	A	Hoxd9.mouse_homeodomain_1	7	1	+	7.241935125048919	0.5381091784571871	CCCATACAA
chr6	157417160	157417161	chr6:157417161:T:A	rs34773654	T	A	T	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr6	157521048	157521049	chr6:157521049:A:G	rs139469982	A	G	G	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr6	157575379	157575380	chr6:157575380:C:T	rs62423202	C	T	C	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr6	157649306	157649307	chr6:157649307:C:T	rs587437	C	T	T	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr6	157663653	157663654	chr6:157663654:T:G	rs141141094	T	G	G	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr6	157881336	157881337	chr6:157881337:G:A	rs6455870	G	A	A	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr6	157982862	157982863	chr6:157982863:T:C	rs73792021	T	C	T	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr6	158011945	158011946	chr6:158011946:T:C	rs9295277	T	C	C	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr6	158081557	158081558	chr6:158081558:C:A	rs173263	C	A	A	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr6	158257471	158257472	chr6:158257472:A:G	rs6920121	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.099252595576761	6.765173995714267	GCCATTAAA
chr6	158268334	158268335	chr6:158268335:G:A	rs9457264	G	A	G	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr6	158311501	158311502	chr6:158311502:T:A	rs3812100	T	A	T	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr6	158446141	158446142	chr6:158446142:C:T	rs341130	C	T	T	Hoxd9.mouse_homeodomain_1	1	1	+	8.409487817756228	7.094685903423221	CCCATTAAA
chr6	158475471	158475472	chr6:158475472:G:A	rs639283	G	A	A	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr6	158505401	158505402	chr6:158505402:C:T	rs9457378	C	T	C	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr6	158654375	158654376	chr6:158654376:G:T	rs9457424	G	T	G	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr6	158674666	158674667	chr6:158674667:T:C	rs2583077	T	C	C	Hoxd9.mouse_homeodomain_1	2	1	-	7.9772278588234515	5.2107920602579325	GCAATAAAA
chr6	158809711	158809712	chr6:158809712:G:T	rs3127183	G	T	T	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr6	158810915	158810916	chr6:158810916:C:T	rs3123133	C	T	C	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr6	158812157	158812158	chr6:158812158:G:A	rs3102965	G	A	A	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr6	158849770	158849771	chr6:158849771:T:C	rs2129210	T	C	T	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr6	158901293	158901294	chr6:158901294:T:C	rs7771794	T	C	C	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr6	158972530	158972531	chr6:158972531:T:C	rs10945586	T	C	T	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr6	159040304	159040305	chr6:159040305:G:A	rs2235819	G	A	G	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr6	159142515	159142516	chr6:159142516:C:T	rs2451973	C	T	T	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr6	159308371	159308372	chr6:159308372:T:A	rs962337	T	A	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.716978748812629	5.7134976120039855	GACATAAAA
chr6	159740595	159740596	chr6:159740596:T:C	rs6899987	T	C	C	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr6	159763123	159763124	chr6:159763124:A:T	rs6937779	A	T	a	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr6	159817754	159817755	chr6:159817755:G:A	rs11754046	G	A	G	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr6	159828335	159828336	chr6:159828336:A:G	rs11965350	A	G	G	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr6	159979588	159979589	chr6:159979589:T:C	rs73590539	T	C	C	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr6	159983486	159983487	chr6:159983487:A:C	rs73594470	A	C	A	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr6	159983517	159983518	chr6:159983518:C:T	rs3798199	C	T	C	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr6	160087139	160087140	chr6:160087140:T:C	rs3798176	T	C	C	Hoxd9.mouse_homeodomain_1	3	1	-	8.409487817756228	7.075409217893736	CCCATTAAA
chr6	160198778	160198779	chr6:160198779:G:C	rs150972629	G	C	G	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr6	160236670	160236671	chr6:160236671:A:G	rs657051	A	G	A	Hoxd9.mouse_homeodomain_1	5	1	+	8.287463081002919	1.9132733627563638	CCAATAAAA
chr6	160261185	160261186	chr6:160261186:A:G	rs3127572	A	G	A	Hoxd9.mouse_homeodomain_1	4	1	-	8.98901893988973	6.333972295027152	CCCATAAAA
chr6	160261204	160261205	chr6:160261205:C:T	rs316024	C	T	C	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr6	160293804	160293805	chr6:160293805:C:T	rs77410834	C	T	c	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr6	160306151	160306152	chr6:160306152:A:T	rs115624339	A	T	A	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr6	160312416	160312417	chr6:160312417:C:A	rs621069	C	A	C	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr6	160742497	160742498	chr6:160742498:T:G	rs147402310	T	G	T	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr6	160787732	160787733	chr6:160787733:A:G	rs13203571	A	G	A	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr6	160988354	160988355	chr6:160988355:T:C	rs602837	T	C	C	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr6	161038632	161038633	chr6:161038633:A:G	rs6455701	A	G	G	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr6	161145876	161145877	chr6:161145877:T:C	rs6455707	T	C	t	Hoxd9.mouse_homeodomain_1	4	1	+	8.678783717710262	6.023737072847684	GCCATAAAA
chr6	161271511	161271512	chr6:161271512:A:G	rs7750855	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.287463081002919	6.953384481140425	CCAATAAAA
chr6	161327522	161327523	chr6:161327523:T:A	rs9355893	T	A	t	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr6	161624249	161624250	chr6:161624250:A:C	rs16892831	A	C	C	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr6	161639887	161639888	chr6:161639888:T:C	rs12527261	T	C	C	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr6	161640377	161640378	chr6:161640378:G:A	rs7754563	G	A	G	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr6	161853009	161853010	chr6:161853010:G:A	rs10945783	G	A	G	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr6	161921625	161921626	chr6:161921626:G:T	rs9355968	G	T	T	Hoxd9.mouse_homeodomain_1	6	1	-	7.241935125048919	8.98901893988973	CCCATACAA
chr6	162036023	162036024	chr6:162036024:G:C	rs68137025	G	C	C	Hoxd9.mouse_homeodomain_1	0	1	+	7.212456609225008	7.522691831404475	GCCATAAAG
chr6	162157574	162157575	chr6:162157575:C:A	rs2849584	C	A	C	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr6	162678646	162678647	chr6:162678647:T:G	rs28868638	T	G	T	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr6	163017893	163017894	chr6:163017894:T:C	rs73783966	T	C	T	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr6	163017908	163017909	chr6:163017909:G:A	rs4709671	G	A	A	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr6	163035273	163035274	chr6:163035274:C:A	rs4629663	C	A	A	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr6	163165536	163165537	chr6:163165537:C:A	rs4709679	C	A	C	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr6	163192576	163192577	chr6:163192577:T:C	rs1001490	T	C	T	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr6	163309301	163309302	chr6:163309302:C:A	rs11757855	C	A	C	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr6	163333888	163333889	chr6:163333889:A:T	rs9458806	A	T	T	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr6	163356886	163356887	chr6:163356887:A:G	rs12203342	A	G	A	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr6	163383382	163383383	chr6:163383383:T:C	rs2064230	T	C	T	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr6	163489839	163489840	chr6:163489840:G:A	rs150496956	G	A	G	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr6	163820446	163820447	chr6:163820447:T:C	rs80314118	T	C	T	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr6	163825175	163825176	chr6:163825176:C:A	rs16895380	C	A	C	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr6	163962488	163962489	chr6:163962489:C:T	rs12660673	C	T	T	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr6	164102813	164102814	chr6:164102814:T:C	rs9456927	T	C	T	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr6	164564772	164564773	chr6:164564773:G:A	rs4709863	G	A	G	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr6	164698301	164698302	chr6:164698302:C:T	rs916921786	C	T	c	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr6	164709779	164709780	chr6:164709780:C:A	rs78581636	C	A	C	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr6	165637460	165637461	chr6:165637461:C:T	rs12529895	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	-	7.212456609225008	6.423571575367866	GCCATAAAG
chr6	165637473	165637474	chr6:165637474:C:T	rs3008042	C	T	T	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr6	165639762	165639763	chr6:165639763:G:A	rs12194265	G	A	G	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr6	165750620	165750621	chr6:165750621:G:A	rs11966353	G	A	G	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr6	165823972	165823973	chr6:165823973:G:T	rs6920797	G	T	G	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr6	165922326	165922327	chr6:165922327:T:C	rs76458034	T	C	T	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr6	165922358	165922359	chr6:165922359:C:T	rs78824932	C	T	C	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr6	166078744	166078745	chr6:166078745:C:A	rs3127368	C	A	A	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr6	166269769	166269770	chr6:166269770:A:T	rs9457153	A	T	A	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr6	166283739	166283740	chr6:166283740:G:A	rs80135071	G	A	G	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr6	166316426	166316427	chr6:166316427:T:G	rs1830558	T	G	T	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr6	166580449	166580450	chr6:166580450:C:T	rs9295353	C	T	C	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr6	166595824	166595825	chr6:166595825:C:G	rs118162777	C	G	C	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr6	166752758	166752759	chr6:166752759:G:A	rs34781195	G	A	A	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr6	166820693	166820694	chr6:166820694:A:C	rs9355595	A	C	A	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr6	166858753	166858754	chr6:166858754:G:A	rs1536644	G	A	A	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr6	166948938	166948939	chr6:166948939:G:A	rs902419166	G	A	G	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr6	167057070	167057071	chr6:167057071:T:G	rs916331	T	G	T	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr6	167099407	167099408	chr6:167099408:A:G	rs9366089	A	G	A	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr6	167099439	167099440	chr6:167099440:A:G	rs9457270	A	G	A	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr6	167119573	167119574	chr6:167119574:A:G	rs1854853	A	G	A	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr6	167131758	167131759	chr6:167131759:G:T	rs4709149	G	T	T	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr6	167158069	167158070	chr6:167158070:G:T	rs56269209	G	T	G	Hoxd9.mouse_homeodomain_1	0	1	+	8.678783717710262	7.094471634580788	GCCATAAAA
chr6	167292330	167292331	chr6:167292331:T:C	rs58652775	T	C	T	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr6	167342341	167342342	chr6:167342342:T:C	chr6:167342342:T:C	T	C	T	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr6	167443997	167443998	chr6:167443998:A:G	rs4075983	A	G	G	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr6	167468963	167468964	chr6:167468964:C:T	rs35371851	C	T	C	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr6	167700815	167700816	chr6:167700816:C:T	rs499070	C	T	C	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr6	167798561	167798562	chr6:167798562:G:A	rs540373	G	A	G	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr6	167805810	167805811	chr6:167805811:C:T	rs551150	C	T	T	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr6	167920853	167920854	chr6:167920854:G:C	rs1008456	G	C	C	Hoxd9.mouse_homeodomain_1	2	1	-	8.027213970992095	4.559222313539767	CACATAAAA
chr6	167972489	167972490	chr6:167972490:G:A	rs7773728	G	A	G	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr6	168008152	168008153	chr6:168008153:C:T	rs1873333	C	T	T	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr6	168014419	168014420	chr6:168014420:C:T	rs12199910	C	T	C	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr6	168015886	168015887	chr6:168015887:G:C	rs151316545	G	C	G	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr6	168017690	168017691	chr6:168017691:C:T	rs57584792	C	T	C	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr6	168052312	168052313	chr6:168052313:T:C	rs6910648	T	C	T	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr6	168087362	168087363	chr6:168087363:C:T	rs6455480	C	T	C	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr6	168098666	168098667	chr6:168098667:G:A	rs73032045	G	A	G	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr6	168126166	168126167	chr6:168126167:C:T	rs4708659	C	T	T	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr6	168126177	168126178	chr6:168126178:T:C	rs4708660	T	C	N	Hoxd9.mouse_homeodomain_1	3	1	-	8.027213970992095	6.693135371129603	CACATAAAA
chr6	168161044	168161045	chr6:168161045:G:A	rs79097477	G	A	G	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr6	168163420	168163421	chr6:168163421:C:G	rs544480435	C	G	C	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr6	168180114	168180115	chr6:168180115:G:A	rs72572764	G	A	G	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr6	168211586	168211587	chr6:168211587:T:C	rs9355182	T	C	C	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr6	168253605	168253606	chr6:168253606:G:A	rs9456013	G	A	G	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr6	168683740	168683741	chr6:168683741:A:G	rs145298705	A	G	A	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr6	168697670	168697671	chr6:168697671:G:A	rs681972	G	A	G	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr6	168708783	168708784	chr6:168708784:T:C	rs686357	T	C	T	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr6	168852159	168852160	chr6:168852160:C:T	rs6912441	C	T	C	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr6	168852187	168852188	chr6:168852188:T:C	rs6939379	T	C	T	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr6	168927636	168927637	chr6:168927637:A:G	rs9355110	A	G	G	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr6	168947414	168947415	chr6:168947415:C:T	rs6455459	C	T	T	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr6	169009507	169009508	chr6:169009508:C:T	rs7770399	C	T	C	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr6	169117501	169117502	chr6:169117502:T:C	rs1322643	T	C	C	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr6	169161257	169161258	chr6:169161258:G:A	rs9689320	G	A	G	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr6	169183585	169183586	chr6:169183586:G:A	rs9346625	G	A	A	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr6	169217333	169217334	chr6:169217334:A:G	rs1132755	A	G	A	Hoxd9.mouse_homeodomain_1	4	1	-	8.409487817756228	5.7544411728936495	CCCATTAAA
chr6	169217334	169217335	chr6:169217335:T:C	rs10280	T	C	t	Hoxd9.mouse_homeodomain_1	3	1	-	8.409487817756228	7.075409217893736	CCCATTAAA
chr6	169533555	169533556	chr6:169533556:T:C	rs3006196	T	C	C	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr6	169553676	169553677	chr6:169553677:A:G	rs2982403	A	G	a	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr6	169628563	169628564	chr6:169628564:C:T	rs73239092	C	T	C	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr6	169823768	169823769	chr6:169823769:G:A	rs116385476	G	A	g	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr6	169889988	169889989	chr6:169889989:C:T	rs934794376	C	T	C	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr6	170137751	170137752	chr6:170137752:A:G	rs111782917	A	G	A	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr6	170404414	170404415	chr6:170404415:C:G	rs4710719	C	G	C	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr6	170552851	170552852	chr6:170552852:T:G	rs1358533714	T	G	T	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr7	148816	148817	chr7:148817:C:G	rs6970236	C	G	C	Hoxd9.mouse_homeodomain_1	2	1	+	7.241935125048919	3.7739434675965886	CCCATACAA
chr7	315847	315848	chr7:315848:C:T	rs36127005	C	T	T	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr7	539998	539999	chr7:539999:G:T	rs1330276906	G	T	G	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr7	573285	573286	chr7:573286:A:G	rs9286356	A	G	C	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr7	588332	588333	chr7:588333:G:T	rs13229325	G	T	G	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr7	603487	603488	chr7:603488:C:A	rs111232485	C	A	C	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr7	832462	832463	chr7:832463:T:C	rs6952577	T	C	T	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr7	873593	873594	chr7:873594:C:T	rs188199171	C	T	C	Hoxd9.mouse_homeodomain_1	3	1	-	7.075409217893736	8.409487817756228	CCCGTTAAA
chr7	873594	873595	chr7:873595:G:T	rs79450102	G	T	G	Hoxd9.mouse_homeodomain_1	2	1	-	7.075409217893736	6.373853359006924	CCCGTTAAA
chr7	873615	873616	chr7:873616:T:C	rs142734717	T	C	T	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr7	882006	882007	chr7:882007:T:C	rs1881115	T	C	C	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr7	1029584	1029585	chr7:1029585:T:C	rs144274703	T	C	T	Hoxd9.mouse_homeodomain_1	0	1	-	7.889898683853121	8.678783717710262	ACCATAAAA
chr7	1041514	1041515	chr7:1041515:C:T	rs115834399	C	T	C	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr7	1048970	1048971	chr7:1048971:C:G	rs10951594	C	G	A	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr7	1048993	1048994	chr7:1048994:A:C	rs74366004	A	C	A	Hoxd9.mouse_homeodomain_1	6	1	+	7.889898683853121	6.1428148690123106	ACCATAAAA
chr7	1049011	1049012	chr7:1049012:A:C	rs4723820	A	C	a	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr7	1109175	1109176	chr7:1109176:C:T	rs28584515	C	T	C	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr7	1109352	1109353	chr7:1109353:C:T	rs12702118	C	T	T	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr7	1167801	1167802	chr7:1167802:T:A	rs2960853	T	A	T	Hoxd9.mouse_homeodomain_1	8	1	-	8.027213970992095	5.094700846226028	CACATAAAA
chr7	1232107	1232108	chr7:1232108:C:T	rs78148157	C	T	C	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr7	1238954	1238955	chr7:1238955:C:G	rs76810695	C	G	C	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr7	1507810	1507811	chr7:1507811:A:G	rs6976713	A	G	G	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr7	1511193	1511194	chr7:1511194:C:T	rs56400710	C	T	C	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr7	1511226	1511227	chr7:1511227:C:T	rs146780865	C	T	C	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr7	1571025	1571026	chr7:1571026:C:T	rs1384637909	C	T	C	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr7	1661955	1661956	chr7:1661956:C:T	rs10255004	C	T	C	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr7	1681177	1681178	chr7:1681178:G:T	rs2178378	G	T	T	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr7	1785667	1785668	chr7:1785668:T:C	rs10950371	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.027213970992095	6.693135371129603	CACATAAAA
chr7	1785684	1785685	chr7:1785685:T:G	rs10230862	T	G	G	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr7	1803657	1803658	chr7:1803658:G:C	rs113529047	G	C	G	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr7	1804071	1804072	chr7:1804072:C:T	rs75649291	C	T	C	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr7	1804108	1804109	chr7:1804109:G:A	rs182768292	G	A	G	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr7	1944293	1944294	chr7:1944294:G:A	rs1554505	G	A	A	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr7	1944308	1944309	chr7:1944309:C:T	rs73051876	C	T	C	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr7	2259496	2259497	chr7:2259497:G:C	rs73043233	G	C	G	Hoxd9.mouse_homeodomain_1	2	1	-	7.654940340027237	4.186948682574907	CCCGTAAAA
chr7	2404799	2404800	chr7:2404800:G:A	chr7:2404800:G:A	G	A	G	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr7	2518253	2518254	chr7:2518254:T:C	rs113091447	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.1462160923678635	5.81213749250537	GCCATAAAC
chr7	2571799	2571800	chr7:2571800:G:A	rs11772903	G	A	G	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr7	2618374	2618375	chr7:2618375:A:G	rs4721890	A	G	A	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr7	2984109	2984110	chr7:2984110:A:T	rs7797287	A	T	A	Hoxd9.mouse_homeodomain_1	4	1	-	8.027213970992095	1.1853955236614904	CACATAAAA
chr7	2984129	2984130	chr7:2984130:T:C	rs28626897	T	C	T	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr7	2994448	2994449	chr7:2994449:T:C	rs13245940	T	C	T	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr7	3020120	3020121	chr7:3020121:C:G	rs6461784	C	G	G	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr7	3025220	3025221	chr7:3025221:C:A	rs17834826	C	A	C	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr7	3034672	3034673	chr7:3034673:A:G	rs182109551	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.027213970992095	6.693135371129603	CACATAAAA
chr7	3042156	3042157	chr7:3042157:C:T	rs41331046	C	T	T	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr7	3104742	3104743	chr7:3104743:G:C	rs6968867	G	C	G	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr7	3104753	3104754	chr7:3104754:G:C	rs10231401	G	C	G	Hoxd9.mouse_homeodomain_1	5	1	-	7.091711387329735	2.6148292216431743	CCCATCAAA
chr7	3107446	3107447	chr7:3107447:C:T	rs6943988	C	T	T	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr7	3138185	3138186	chr7:3138186:T:C	rs12700630	T	C	T	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr7	3255126	3255127	chr7:3255127:G:T	rs117490668	G	T	G	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr7	3263066	3263067	chr7:3263067:T:C	rs6971784	T	C	C	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr7	3300435	3300436	chr7:3300436:C:A	rs184531030	C	A	C	Hoxd9.mouse_homeodomain_1	2	1	+	7.45645131454733	6.75489545566052	CCCATAAAC
chr7	3300446	3300447	chr7:3300447:C:A	rs62437663	C	A	C	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr7	4009967	4009968	chr7:4009968:G:A	rs370719891	G	A	G	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr7	4042157	4042158	chr7:4042158:C:T	rs7786840	C	T	T	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr7	4042158	4042159	chr7:4042159:A:G	rs7805307	A	G	G	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr7	4092131	4092132	chr7:4092132:A:G	rs13247783	A	G	G	Hoxd9.mouse_homeodomain_1	3	1	+	7.212456609225008	5.878378009362515	GCCATAAAG
chr7	4092140	4092141	chr7:4092141:T:G	rs34024211	T	G	G	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr7	4097336	4097337	chr7:4097337:A:G	rs7790901	A	G	a	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr7	4118727	4118728	chr7:4118728:A:G	rs57888190	A	G	A	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr7	4157594	4157595	chr7:4157595:A:G	rs631709	A	G	G	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr7	4189265	4189266	chr7:4189266:C:T	rs16871145	C	T	C	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr7	4189266	4189267	chr7:4189267:G:A	rs1002439804	G	A	G	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr7	4198548	4198549	chr7:4198549:G:A	rs116198798	G	A	G	Hoxd9.mouse_homeodomain_1	0	1	-	8.287463081002919	6.392915775693977	CCAATAAAA
chr7	4198552	4198553	chr7:4198553:A:C	chr7:4198553:A:C	A	C	A	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr7	4204315	4204316	chr7:4204316:C:T	rs17134572	C	T	T	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr7	4207430	4207431	chr7:4207431:G:A	rs75967417	G	A	G	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr7	4228034	4228035	chr7:4228035:A:G	rs143019999	A	G	A	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr7	4228042	4228043	chr7:4228043:C:T	rs112848736	C	T	C	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr7	4254943	4254944	chr7:4254944:T:C	rs7781965	T	C	C	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr7	4286279	4286280	chr7:4286280:T:G	rs73047616	T	G	T	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr7	4286310	4286311	chr7:4286311:G:A	rs11770553	G	A	G	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr7	4378355	4378356	chr7:4378356:C:A	rs314623	C	A	C	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr7	4383432	4383433	chr7:4383433:C:T	rs73671480	C	T	C	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr7	4401616	4401617	chr7:4401617:T:G	rs10155898	T	G	G	Hoxd9.mouse_homeodomain_1	4	1	+	7.889898683853121	1.0480802365225155	ACCATAAAA
chr7	4563361	4563362	chr7:4563362:G:A	rs10255406	G	A	A	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr7	4684622	4684623	chr7:4684623:G:C	rs114420212	G	C	G	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr7	4806536	4806537	chr7:4806537:G:A	rs78828628	G	A	G	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr7	5045539	5045540	chr7:5045540:G:A	rs147704645	G	A	g	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr7	5088134	5088135	chr7:5088135:T:C	rs73053714	T	C	C	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr7	5143167	5143168	chr7:5143168:C:G	rs12672204	C	G	C	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr7	5179713	5179714	chr7:5179714:C:T	rs62441942	C	T	C	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr7	5404708	5404709	chr7:5404709:T:C	rs7785127	T	C	T	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr7	5413124	5413125	chr7:5413125:C:T	rs4628168	C	T	C	Hoxd9.mouse_homeodomain_1	2	1	+	7.654940340027237	1.1674998824035994	CCCGTAAAA
chr7	5424273	5424274	chr7:5424274:A:C	rs536179674	A	C	A	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr7	5424277	5424278	chr7:5424278:C:T	rs185316764	C	T	C	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr7	5424287	5424288	chr7:5424288:T:C	chr7:5424288:T:C	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.409487817756228	7.075409217893736	CCCATTAAA
chr7	5723737	5723738	chr7:5723738:G:A	rs4720637	G	A	G	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr7	5797820	5797821	chr7:5797821:C:T	chr7:5797821:C:T	C	T	.	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr7	6070184	6070185	chr7:6070185:C:T	rs852144	C	T	C	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr7	6096360	6096361	chr7:6096361:T:C	rs7456787	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.98901893988973	7.654940340027237	CCCATAAAA
chr7	6336407	6336408	chr7:6336408:C:T	rs10250547	C	T	C	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr7	6676303	6676304	chr7:6676304:C:T	rs12702533	C	T	C	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr7	7015189	7015190	chr7:7015190:A:G	rs6943505	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.409487817756228	7.075409217893736	CCCATTAAA
chr7	7015197	7015198	chr7:7015198:G:C	rs55999500	G	C	G	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr7	7157014	7157015	chr7:7157015:A:G	rs2116533	A	G	A	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr7	7193288	7193289	chr7:7193289:A:G	rs4415231	A	G	A	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr7	7386032	7386033	chr7:7386033:A:G	rs1294634	A	G	A	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr7	7476492	7476493	chr7:7476493:T:A	rs6957880	T	A	A	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr7	7497474	7497475	chr7:7497475:T:C	rs80014938	T	C	T	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr7	7610710	7610711	chr7:7610711:C:A	rs11773679	C	A	A	Hoxd9.mouse_homeodomain_1	2	1	+	7.1462160923678635	6.444660233481052	GCCATAAAC
chr7	7641683	7641684	chr7:7641684:C:A	chr7:7641684:C:A	C	A	C	Hoxd9.mouse_homeodomain_1	0	1	+	8.027213970992095	6.928093714955487	CACATAAAA
chr7	7680716	7680717	chr7:7680717:G:T	rs10278708	G	T	T	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr7	7861103	7861104	chr7:7861104:G:C	rs6965111	G	C	G	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr7	7898712	7898713	chr7:7898713:G:A	rs7785709	G	A	A	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr7	7968122	7968123	chr7:7968123:G:A	rs58865528	G	A	G	Hoxd9.mouse_homeodomain_1	0	1	+	7.716978748812629	6.928093714955487	GACATAAAA
chr7	8059280	8059281	chr7:8059281:C:T	rs114720416	C	T	C	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr7	8168698	8168699	chr7:8168699:C:T	rs188795393	C	T	C	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr7	8203562	8203563	chr7:8203563:A:G	rs11976509	A	G	A	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr7	8250483	8250484	chr7:8250484:T:C	rs3779358	T	C	-	Hoxd9.mouse_homeodomain_1	6	1	-	8.409487817756228	1.7056618711644962	CCCATTAAA
chr7	8291966	8291967	chr7:8291967:A:G	rs35165856	A	G	A	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr7	8291972	8291973	chr7:8291973:C:A	rs78146631	C	A	C	Hoxd9.mouse_homeodomain_1	3	1	-	7.075409217893736	6.406006680947584	CCCGTTAAA
chr7	8597570	8597571	chr7:8597571:G:A	rs28473272	G	A	G	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr7	8833659	8833660	chr7:8833660:C:G	rs9640080	C	G	-	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr7	8964287	8964288	chr7:8964288:A:C	rs12702819	A	C	A	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr7	9018052	9018053	chr7:9018053:A:G	rs10224945	A	G	A	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr7	9065625	9065626	chr7:9065626:A:G	rs4725160	A	G	A	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr7	9173912	9173913	chr7:9173913:G:A	rs390122	G	A	A	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr7	9488325	9488326	chr7:9488326:A:T	rs2709093	A	T	A	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr7	9554175	9554176	chr7:9554176:C:T	rs6964683	C	T	c	Hoxd9.mouse_homeodomain_1	0	1	-	7.1462160923678635	6.357331058510722	GCCATAAAC
chr7	9596659	9596660	chr7:9596660:A:T	rs2657242	A	T	T	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr7	9673813	9673814	chr7:9673814:G:A	rs28407919	G	A	G	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr7	9861220	9861221	chr7:9861221:A:G	rs2907997	A	G	A	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr7	10157927	10157928	chr7:10157928:T:C	rs116970768	T	C	T	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr7	10225673	10225674	chr7:10225674:C:A	rs7799939	C	A	C	Hoxd9.mouse_homeodomain_1	0	1	+	8.027213970992095	6.928093714955487	CACATAAAA
chr7	10430453	10430454	chr7:10430454:C:A	rs7456195	C	A	C	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr7	10973648	10973649	chr7:10973649:G:C	rs146916413	G	C	G	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr7	10973656	10973657	chr7:10973657:G:A	rs550735529	G	A	G	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr7	10973666	10973667	chr7:10973667:G:A	rs567695436	G	A	G	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr7	11461900	11461901	chr7:11461901:T:C	rs1014184	T	C	T	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr7	11464782	11464783	chr7:11464783:C:A	rs39188	C	A	a	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr7	11544993	11544994	chr7:11544994:C:T	rs2107477	C	T	T	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr7	11544994	11544995	chr7:11544995:A:G	rs2107476	A	G	G	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr7	11643082	11643083	chr7:11643083:A:C	rs1725451	A	C	C	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr7	11897068	11897069	chr7:11897069:C:T	rs2355755	C	T	T	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr7	11970209	11970210	chr7:11970210:T:A	rs62433187	T	A	T	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr7	12031594	12031595	chr7:12031595:A:G	rs10278803	A	G	G	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr7	12123493	12123494	chr7:12123494:A:T	rs1003432	A	T	T	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr7	12130800	12130801	chr7:12130801:C:G	rs573411815	C	G	C	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr7	12366559	12366560	chr7:12366560:G:A	rs13247878	G	A	G	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr7	12564246	12564247	chr7:12564247:T:C	rs79876859	T	C	T	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr7	12564256	12564257	chr7:12564257:C:T	rs61124922	C	T	C	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr7	12582206	12582207	chr7:12582207:T:G	rs6460968	T	G	G	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr7	12694605	12694606	chr7:12694606:T:C	rs10277284	T	C	C	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr7	12694948	12694949	chr7:12694949:C:T	rs12533880	C	T	C	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr7	12694989	12694990	chr7:12694990:C:A	rs55909982	C	A	A	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr7	12716061	12716062	chr7:12716062:G:T	rs187045852	G	T	G	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr7	12716093	12716094	chr7:12716094:C:G	rs7801894	C	G	C	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr7	12771177	12771178	chr7:12771178:C:G	rs555014479	C	G	C	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr7	13107553	13107554	chr7:13107554:G:T	rs116105394	G	T	G	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr7	13144980	13144981	chr7:13144981:A:G	rs80000931	A	G	A	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr7	13171869	13171870	chr7:13171870:C:T	rs2191038	C	T	C	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr7	13181524	13181525	chr7:13181525:C:G	rs2012648	C	G	G	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr7	13543987	13543988	chr7:13543988:A:G	rs10807767	A	G	a	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr7	13973702	13973703	chr7:13973703:A:T	rs1476621	A	T	a	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr7	13985743	13985744	chr7:13985744:T:C	rs3801107	T	C	T	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr7	14158486	14158487	chr7:14158487:T:G	rs6962724	T	G	T	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr7	14206694	14206695	chr7:14206695:A:G	rs10950512	A	G	A	Hoxd9.mouse_homeodomain_1	7	1	+	8.98901893988973	2.285192993297999	CCCATAAAA
chr7	14292374	14292375	chr7:14292375:G:A	rs17711148	G	A	G	Hoxd9.mouse_homeodomain_1	0	1	-	8.027213970992095	6.132666665683155	CACATAAAA
chr7	14605041	14605042	chr7:14605042:T:C	rs17150062	T	C	C	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr7	15016898	15016899	chr7:15016899:T:C	rs74950941	T	C	T	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr7	15392482	15392483	chr7:15392483:T:C	rs4721430	T	C	T	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr7	15483604	15483605	chr7:15483605:C:A	rs7802592	C	A	C	Hoxd9.mouse_homeodomain_1	1	1	+	7.889898683853121	6.928093714955487	ACCATAAAA
chr7	15502610	15502611	chr7:15502611:G:A	rs7809664	G	A	A	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr7	15515470	15515471	chr7:15515471:C:A	rs77433068	C	A	C	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr7	15555610	15555611	chr7:15555611:T:C	rs75618390	T	C	T	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr7	15566712	15566713	chr7:15566713:A:G	rs10239845	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.287463081002919	6.953384481140425	CCAATAAAA
chr7	15680469	15680470	chr7:15680470:T:C	rs13224011	T	C	T	Hoxd9.mouse_homeodomain_1	4	1	+	8.027213970992095	5.372167326129518	CACATAAAA
chr7	15755310	15755311	chr7:15755311:T:C	rs6954442	T	C	T	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr7	15840629	15840630	chr7:15840630:T:G	rs17169098	T	G	T	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr7	15937174	15937175	chr7:15937175:A:T	rs76301844	A	T	A	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr7	16318689	16318690	chr7:16318690:G:A	rs984810	G	A	G	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr7	16492251	16492252	chr7:16492252:G:A	rs2389641	G	A	A	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr7	16678958	16678959	chr7:16678959:G:A	rs34075482	G	A	A	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr7	16712187	16712188	chr7:16712188:A:C	rs11980082	A	C	A	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr7	16743141	16743142	chr7:16743142:C:A	rs1585349	C	A	A	Hoxd9.mouse_homeodomain_1	1	1	+	7.241935125048919	6.2801301561512854	CCCATACAA
chr7	16846890	16846891	chr7:16846891:A:G	rs61108505	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	7.522691831404475	6.188613231541982	CCCATAAAG
chr7	16846911	16846912	chr7:16846912:T:C	rs10950632	T	C	T	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr7	16880681	16880682	chr7:16880682:A:C	rs117351380	A	C	A	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr7	16967901	16967902	chr7:16967902:G:T	rs4719488	G	T	G	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr7	17063280	17063281	chr7:17063281:G:T	rs10274310	G	T	T	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr7	17297786	17297787	chr7:17297787:C:T	rs140084506	C	T	C	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr7	17690583	17690584	chr7:17690584:C:T	rs2537606	C	T	C	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr7	17903721	17903722	chr7:17903722:A:C	rs1568815	A	C	A	Hoxd9.mouse_homeodomain_1	7	1	+	8.98901893988973	6.099603169859144	CCCATAAAA
chr7	18006085	18006086	chr7:18006086:G:T	rs10807788	G	T	T	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr7	18089177	18089178	chr7:18089178:A:T	rs76805341	A	T	A	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr7	18155275	18155276	chr7:18155276:C:G	rs9942632	C	G	G	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr7	18798740	18798741	chr7:18798741:A:G	rs6973675	A	G	A	Hoxd9.mouse_homeodomain_1	4	1	-	7.212456609225008	4.557409964362429	GCCATAAAG
chr7	18857222	18857223	chr7:18857223:G:A	rs35041323	G	A	G	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr7	18977309	18977310	chr7:18977310:G:C	rs12533489	G	C	G	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr7	19294905	19294906	chr7:19294906:C:T	rs1322082961	C	T	C	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr7	19469989	19469990	chr7:19469990:G:T	rs530828167	G	T	G	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr7	19728844	19728845	chr7:19728845:T:C	rs10262988	T	C	C	Hoxd9.mouse_homeodomain_1	4	1	+	7.889898683853121	5.234852038990543	ACCATAAAA
chr7	19734845	19734846	chr7:19734846:A:C	rs28402966	A	C	A	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr7	19773111	19773112	chr7:19773112:C:G	chr7:19773112:C:G	C	G	C	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr7	19773135	19773136	chr7:19773136:C:A	rs114353950	C	A	C	Hoxd9.mouse_homeodomain_1	0	1	-	7.9772278588234515	6.392915775693977	GCAATAAAA
chr7	20084290	20084291	chr7:20084291:C:T	rs11970927	C	T	C	Hoxd9.mouse_homeodomain_1	1	1	+	7.091711387329735	5.776909472996728	CCCATCAAA
chr7	20144877	20144878	chr7:20144878:A:C	rs6979361	A	C	A	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr7	20176724	20176725	chr7:20176725:C:T	rs3114446	C	T	C	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr7	20327363	20327364	chr7:20327364:A:G	rs57718665	A	G	A	Hoxd9.mouse_homeodomain_1	8	1	+	8.409487817756228	6.943160709270972	CCCATTAAA
chr7	20350507	20350508	chr7:20350508:A:T	rs17364861	A	T	A	Hoxd9.mouse_homeodomain_1	5	1	+	7.45645131454733	6.876920192413827	CCCATAAAC
chr7	20358283	20358284	chr7:20358284:T:C	rs10251386	T	C	T	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr7	20389529	20389530	chr7:20389530:T:C	rs10486394	T	C	T	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr7	20575063	20575064	chr7:20575064:A:G	rs17143086	A	G	A	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr7	20665256	20665257	chr7:20665257:C:T	rs6949607	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	+	8.409487817756228	6.514940512447287	CCCATTAAA
chr7	20700048	20700049	chr7:20700049:G:A	rs12700230	G	A	G	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr7	20701719	20701720	chr7:20701720:A:T	rs10488579	A	T	A	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr7	20781652	20781653	chr7:20781653:A:G	rs2286260	A	G	a	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr7	20826359	20826360	chr7:20826360:C:A	rs12700239	C	A	C	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr7	20939572	20939573	chr7:20939573:G:A	rs10275740	G	A	g	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr7	21071086	21071087	chr7:21071087:G:A	rs12700250	G	A	A	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr7	21141400	21141401	chr7:21141401:C:T	rs61520146	C	T	C	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr7	21191830	21191831	chr7:21191831:C:T	rs17143998	C	T	T	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr7	21262662	21262663	chr7:21262663:C:T	rs4722003	C	T	C	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr7	21262759	21262760	chr7:21262760:G:T	rs17144187	G	T	G	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr7	21339674	21339675	chr7:21339675:A:G	rs7782060	A	G	A	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr7	21384924	21384925	chr7:21384925:C:T	rs4722020	C	T	T	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr7	21539501	21539502	chr7:21539502:A:G	rs11486807	A	G	A	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr7	21542693	21542694	chr7:21542694:C:G	rs11773317	C	G	C	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr7	21673413	21673414	chr7:21673414:A:T	chr7:21673414:A:T	A	T	A	Hoxd9.mouse_homeodomain_1	8	1	+	7.241935125048919	4.309422000282851	CCCATACAA
chr7	21830672	21830673	chr7:21830673:T:C	rs76611411	T	C	T	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr7	21891525	21891526	chr7:21891526:T:G	rs966728935	T	G	T	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr7	21944971	21944972	chr7:21944972:G:T	rs10234020	G	T	.	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr7	21945007	21945008	chr7:21945008:G:A	chr7:21945008:G:A	G	A	.	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr7	21996698	21996699	chr7:21996699:T:C	rs62447491	T	C	T	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr7	22005236	22005237	chr7:22005237:T:C	rs1362156	T	C	T	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr7	22402795	22402796	chr7:22402796:C:G	rs3094971	C	G	C	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr7	22488948	22488949	chr7:22488949:A:G	rs17146982	A	G	A	Hoxd9.mouse_homeodomain_1	8	1	+	8.678783717710262	7.212456609225008	GCCATAAAA
chr7	22583334	22583335	chr7:22583335:C:T	rs6973240	C	T	C	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr7	22673146	22673147	chr7:22673147:C:T	rs2961303	C	T	c	Hoxd9.mouse_homeodomain_1	0	1	+	7.241935125048919	5.347387819739977	CCCATACAA
chr7	22673257	22673258	chr7:22673258:G:A	rs2905325	G	A	a	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr7	22720382	22720383	chr7:22720383:C:A	rs13438415	C	A	C	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr7	22720391	22720392	chr7:22720392:C:G	rs73683966	C	G	T	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr7	22820795	22820796	chr7:22820796:A:G	rs12532922	A	G	A	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr7	22853815	22853816	chr7:22853816:T:C	rs114159831	T	C	T	Hoxd9.mouse_homeodomain_1	6	1	-	7.075409217893736	0.37158327130200364	CCCGTTAAA
chr7	22879405	22879406	chr7:22879406:A:G	rs7779210	A	G	A	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr7	22880534	22880535	chr7:22880535:A:G	rs13238288	A	G	A	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr7	22912478	22912479	chr7:22912479:T:C	rs10266530	T	C	t	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr7	22930766	22930767	chr7:22930767:T:C	rs62450593	T	C	T	Hoxd9.mouse_homeodomain_1	0	1	-	7.889898683853121	8.678783717710262	ACCATAAAA
chr7	23012806	23012807	chr7:23012807:A:T	rs77103884	A	T	A	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr7	23066368	23066369	chr7:23066369:G:A	rs12534507	G	A	A	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr7	23097568	23097569	chr7:23097569:C:T	rs1115941	C	T	C	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr7	23105193	23105194	chr7:23105194:A:G	rs79357375	A	G	A	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr7	23168726	23168727	chr7:23168727:C:T	rs858308	C	T	C	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr7	23213827	23213828	chr7:23213828:A:T	rs534474886	A	T	A	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr7	23222815	23222816	chr7:23222816:T:A	rs1624451	T	A	A	Hoxd9.mouse_homeodomain_1	4	1	+	8.287463081002919	1.445644633672313	CCAATAAAA
chr7	23280169	23280170	chr7:23280170:T:G	rs1728320	T	G	G	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr7	23298156	23298157	chr7:23298157:C:T	rs145260264	C	T	C	Hoxd9.mouse_homeodomain_1	1	1	+	8.409487817756228	7.094685903423221	CCCATTAAA
chr7	23349281	23349282	chr7:23349282:A:C	rs139035606	A	C	A	Hoxd9.mouse_homeodomain_1	7	1	+	8.287463081002919	5.398047310972334	CCAATAAAA
chr7	23470521	23470522	chr7:23470522:A:G	rs372236666	A	G	A	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr7	23471037	23471038	chr7:23471038:G:C	rs1238181321	G	C	G	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr7	23494682	23494683	chr7:23494683:C:T	rs142409058	C	T	C	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr7	23518230	23518231	chr7:23518231:A:G	rs28558701	A	G	A	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr7	23536632	23536633	chr7:23536633:A:G	rs6461714	A	G	N	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr7	23928519	23928520	chr7:23928520:G:C	rs62466495	G	C	G	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr7	23961125	23961126	chr7:23961126:T:G	rs6969677	T	G	T	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr7	24039461	24039462	chr7:24039462:T:C	rs80067671	T	C	T	Hoxd9.mouse_homeodomain_1	8	1	-	7.889898683853121	6.423571575367866	ACCATAAAA
chr7	24172995	24172996	chr7:24172996:T:C	rs17148935	T	C	T	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr7	24307587	24307588	chr7:24307588:T:G	rs12670597	T	G	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.716978748812629	1.1414706446091483	GACATAAAA
chr7	24439272	24439273	chr7:24439273:T:G	rs77408165	T	G	T	Hoxd9.mouse_homeodomain_1	8	1	-	7.34470511784777	5.81213749250537	GCCGTAAAA
chr7	24456912	24456913	chr7:24456913:G:A	rs75862971	G	A	G	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr7	24457333	24457334	chr7:24457334:C:T	rs933305344	C	T	C	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr7	24765264	24765265	chr7:24765265:G:C	rs9648313	G	C	G	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr7	24765271	24765272	chr7:24765272:A:G	rs28570974	A	G	A	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr7	24820520	24820521	chr7:24820521:G:A	rs115903227	G	A	G	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr7	24967100	24967101	chr7:24967101:C:T	rs152	C	T	C	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr7	25405780	25405781	chr7:25405781:A:T	rs7782780	A	T	T	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr7	25408327	25408328	chr7:25408328:T:C	rs1034836	T	C	C	Hoxd9.mouse_homeodomain_1	6	1	-	7.091711387329735	0.38788544073800313	CCCATCAAA
chr7	25484547	25484548	chr7:25484548:G:T	rs4722471	G	T	G	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr7	25497094	25497095	chr7:25497095:C:A	rs116143630	C	A	C	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr7	25628634	25628635	chr7:25628635:G:A	rs10235998	G	A	G	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr7	25776662	25776663	chr7:25776663:T:A	rs17152664	T	A	T	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr7	25787192	25787193	chr7:25787193:A:G	rs286690	A	G	G	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr7	25787217	25787218	chr7:25787218:A:G	rs286691	A	G	G	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr7	25834610	25834611	chr7:25834611:T:A	rs75166914	T	A	T	Hoxd9.mouse_homeodomain_1	4	1	+	7.716978748812629	0.875160301482023	GACATAAAA
chr7	25844705	25844706	chr7:25844706:T:C	rs77086222	T	C	T	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr7	25857767	25857768	chr7:25857768:G:T	rs966042	G	T	G	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr7	25881462	25881463	chr7:25881463:C:T	rs4722536	C	T	c	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr7	26183673	26183674	chr7:26183674:A:G	rs12113404	A	G	G	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr7	26368702	26368703	chr7:26368703:C:T	rs6965433	C	T	C	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr7	26382727	26382728	chr7:26382728:G:C	rs74936762	G	C	G	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr7	26449380	26449381	chr7:26449381:C:T	rs6944547	C	T	C	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr7	26459181	26459182	chr7:26459182:C:T	rs1463249335	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	-	7.9772278588234515	7.188342824966311	GCAATAAAA
chr7	26480755	26480756	chr7:26480756:C:A	rs28569928	C	A	A	Hoxd9.mouse_homeodomain_1	1	1	+	8.287463081002919	7.325658112105286	CCAATAAAA
chr7	26525873	26525874	chr7:26525874:A:G	rs6979763	A	G	A	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr7	26659228	26659229	chr7:26659229:A:G	rs11971041	A	G	A	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr7	26659441	26659442	chr7:26659442:A:G	rs11971098	A	G	A	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr7	26833574	26833575	chr7:26833575:G:C	rs113360640	G	C	G	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr7	27098936	27098937	chr7:27098937:C:A	rs187060419	C	A	C	Hoxd9.mouse_homeodomain_1	1	1	+	7.9772278588234515	7.0154228899258175	GCAATAAAA
chr7	27098937	27098938	chr7:27098938:A:T	rs189603965	A	T	A	Hoxd9.mouse_homeodomain_1	2	1	+	7.9772278588234515	2.1913432600866263	GCAATAAAA
chr7	27111895	27111896	chr7:27111896:G:A	rs17471751	G	A	G	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr7	27119785	27119786	chr7:27119786:C:T	rs739734	C	T	c	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr7	27129768	27129769	chr7:27129769:A:C	rs6957209	A	C	A	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr7	27161285	27161286	chr7:27161286:A:G	rs875898	A	G	A	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr7	27161458	27161459	chr7:27161459:G:A	rs544106565	G	A	G	Hoxd9.mouse_homeodomain_1	1	1	-	7.212456609225008	5.897654694892	GCCATAAAG
chr7	27314284	27314285	chr7:27314285:G:A	rs11564003	G	A	A	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr7	27346998	27346999	chr7:27346999:T:C	rs11979443	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.9772278588234515	6.643149258960959	GCAATAAAA
chr7	27409942	27409943	chr7:27409943:A:C	rs28361571	A	C	A	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr7	27409961	27409962	chr7:27409962:C:T	chr7:27409962:C:T	C	T	C	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr7	27516699	27516700	chr7:27516700:G:T	rs541092316	G	T	G	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr7	27643251	27643252	chr7:27643252:C:T	rs13242248	C	T	C	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr7	27739360	27739361	chr7:27739361:T:C	rs6952476	T	C	T	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr7	28113216	28113217	chr7:28113217:G:A	rs4722755	G	A	G	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr7	28113220	28113221	chr7:28113221:G:A	rs17156404	G	A	G	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr7	28132966	28132967	chr7:28132967:T:C	rs917115	T	C	C	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr7	28230328	28230329	chr7:28230329:A:T	rs12537724	A	T	A	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr7	28349598	28349599	chr7:28349599:G:A	rs10269853	G	A	g	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr7	28707913	28707914	chr7:28707914:T:C	rs7798774	T	C	T	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr7	28776583	28776584	chr7:28776584:C:T	rs62442194	C	T	C	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr7	28892144	28892145	chr7:28892145:G:A	rs62442254	G	A	G	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr7	28919570	28919571	chr7:28919571:G:A	rs192030372	G	A	G	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr7	29012906	29012907	chr7:29012907:C:G	rs608019	C	G	G	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr7	29035682	29035683	chr7:29035683:A:T	rs607432	A	T	A	Hoxd9.mouse_homeodomain_1	7	1	+	8.98901893988973	7.241935125048919	CCCATAAAA
chr7	29172166	29172167	chr7:29172167:C:T	rs12536733	C	T	C	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr7	29295093	29295094	chr7:29295094:T:C	rs57402438	T	C	T	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr7	29297813	29297814	chr7:29297814:G:A	rs80337465	G	A	A	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr7	29316194	29316195	chr7:29316195:G:A	rs1004056	G	A	A	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr7	29350571	29350572	chr7:29350572:A:G	rs538019913	A	G	A	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr7	29394318	29394319	chr7:29394319:T:A	rs10951219	T	A	T	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr7	29496381	29496382	chr7:29496382:G:A	rs10951227	G	A	A	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr7	29502456	29502457	chr7:29502457:G:C	rs4722914	G	C	G	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr7	29626913	29626914	chr7:29626914:T:C	rs850013	T	C	C	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr7	29748564	29748565	chr7:29748565:T:C	rs66873650	T	C	-	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr7	29794061	29794062	chr7:29794062:A:C	rs10238381	A	C	C	Hoxd9.mouse_homeodomain_1	6	1	+	7.889898683853121	6.1428148690123106	ACCATAAAA
chr7	30520729	30520730	chr7:30520730:C:A	rs2970509	C	A	C	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr7	30557451	30557452	chr7:30557452:C:G	rs117080392	C	G	C	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr7	30691213	30691214	chr7:30691214:C:T	rs17159372	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	-	7.212456609225008	6.423571575367866	GCCATAAAG
chr7	30813763	30813764	chr7:30813764:G:A	rs77519584	G	A	G	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr7	31083403	31083404	chr7:31083404:C:T	rs2267731	C	T	C	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr7	31232468	31232469	chr7:31232469:G:A	rs2690853	G	A	A	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr7	31403090	31403091	chr7:31403091:A:T	rs2109841	A	T	T	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr7	31475622	31475623	chr7:31475623:G:C	rs74763357	G	C	G	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr7	31497790	31497791	chr7:31497791:C:G	rs6462282	C	G	G	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr7	31497799	31497800	chr7:31497800:G:A	rs977965170	G	A	G	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr7	31782637	31782638	chr7:31782638:G:T	rs13232836	G	T	G	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr7	31833759	31833760	chr7:31833760:G:A	rs76770111	G	A	G	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr7	31882135	31882136	chr7:31882136:T:A	rs978820	T	A	A	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr7	31956416	31956417	chr7:31956417:G:A	rs73310524	G	A	G	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr7	32023099	32023100	chr7:32023100:C:T	rs146588821	C	T	C	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr7	32023768	32023769	chr7:32023769:G:A	rs7803028	G	A	G	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr7	32119526	32119527	chr7:32119527:C:T	rs6946776	C	T	T	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr7	32152983	32152984	chr7:32152984:A:G	rs6415258	A	G	A	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr7	32162191	32162192	chr7:32162192:T:G	rs11978519	T	G	T	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr7	32178824	32178825	chr7:32178825:C:T	rs28409745	C	T	C	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr7	32201463	32201464	chr7:32201464:T:C	rs57803157	T	C	T	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr7	32201764	32201765	chr7:32201765:A:G	rs4720054	A	G	G	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr7	32218182	32218183	chr7:32218183:C:T	rs117610154	C	T	C	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr7	32490898	32490899	chr7:32490899:C:T	rs3763444	C	T	C	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr7	32490903	32490904	chr7:32490904:T:C	rs115700887	T	C	T	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr7	33115050	33115051	chr7:33115051:T:A	rs73307578	T	A	T	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr7	33156821	33156822	chr7:33156822:T:G	rs13236414	T	G	T	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr7	33544928	33544929	chr7:33544929:T:A	rs2700699	T	A	A	Hoxd9.mouse_homeodomain_1	7	1	-	7.1462160923678635	5.399132277527052	GCCATAAAC
chr7	33806247	33806248	chr7:33806248:C:T	rs759729	C	T	C	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr7	33887545	33887546	chr7:33887546:A:G	rs315864	A	G	G	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr7	33916377	33916378	chr7:33916378:T:G	chr7:33916378:T:G	T	G	T	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr7	34061620	34061621	chr7:34061621:A:G	rs1024808	A	G	A	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr7	34190757	34190758	chr7:34190758:T:C	rs11768361	T	C	T	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr7	34662186	34662187	chr7:34662187:T:C	rs425990	T	C	C	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr7	34764445	34764446	chr7:34764446:T:A	rs324962	T	A	A	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr7	34947517	34947518	chr7:34947518:T:A	rs117485469	T	A	.	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr7	34962457	34962458	chr7:34962458:T:G	rs71537656	T	G	.	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr7	35504158	35504159	chr7:35504159:G:C	rs2059368	G	C	C	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr7	35522154	35522155	chr7:35522155:G:A	rs73334204	G	A	G	Hoxd9.mouse_homeodomain_1	0	1	+	8.678783717710262	7.889898683853121	GCCATAAAA
chr7	36187479	36187480	chr7:36187480:A:G	rs888043	A	G	A	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr7	36299872	36299873	chr7:36299873:C:T	rs28465447	C	T	C	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr7	36475300	36475301	chr7:36475301:G:T	rs11765557	G	T	G	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr7	36523950	36523951	chr7:36523951:T:G	rs190615379	T	G	T	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr7	36528904	36528905	chr7:36528905:G:A	rs1986877	G	A	A	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr7	36591993	36591994	chr7:36591994:C:T	rs35611190	C	T	T	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr7	36645083	36645084	chr7:36645084:G:A	rs11769628	G	A	G	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr7	36689542	36689543	chr7:36689543:T:C	rs77672936	T	C	A	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr7	36692169	36692170	chr7:36692170:C:T	rs6947416	C	T	.	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr7	36721343	36721344	chr7:36721344:G:C	rs7349955	G	C	C	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr7	36735609	36735610	chr7:36735610:G:A	rs17379430	G	A	G	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr7	36780757	36780758	chr7:36780758:C:T	rs10951496	C	T	C	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr7	36811820	36811821	chr7:36811821:G:A	rs10951500	G	A	G	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr7	36811840	36811841	chr7:36811841:C:T	rs10274668	C	T	T	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr7	36881379	36881380	chr7:36881380:C:T	rs3778710	C	T	C	Hoxd9.mouse_homeodomain_1	3	1	-	7.34470511784777	8.678783717710262	GCCGTAAAA
chr7	37047626	37047627	chr7:37047627:A:T	rs17170851	A	T	A	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr7	37180147	37180148	chr7:37180148:G:A	rs1420422	G	A	G	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr7	37772150	37772151	chr7:37772151:A:G	rs73353212	A	G	A	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr7	37853616	37853617	chr7:37853617:A:G	rs2722333	A	G	G	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr7	37926360	37926361	chr7:37926361:C:T	rs28457747	C	T	C	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr7	37993429	37993430	chr7:37993430:A:G	rs76669175	A	G	A	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr7	38020835	38020836	chr7:38020836:A:G	rs7784794	A	G	A	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr7	38398993	38398994	chr7:38398994:T:C	rs78270443	T	C	C	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr7	38542646	38542647	chr7:38542647:C:T	rs2392582	C	T	T	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr7	38554759	38554760	chr7:38554760:G:C	rs10253064	G	C	C	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr7	38773750	38773751	chr7:38773751:C:T	rs73694736	C	T	c	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr7	38907816	38907817	chr7:38907817:T:C	rs9638944	T	C	T	Hoxd9.mouse_homeodomain_1	4	1	+	7.889898683853121	5.234852038990543	ACCATAAAA
chr7	39267240	39267241	chr7:39267241:A:G	rs62453457	A	G	A	Hoxd9.mouse_homeodomain_1	6	1	+	8.98901893988973	2.285192993297999	CCCATAAAA
chr7	39271267	39271268	chr7:39271268:T:A	rs12701709	T	A	A	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr7	39520005	39520006	chr7:39520006:A:C	chr7:39520006:A:C	A	C	A	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr7	39553551	39553552	chr7:39553552:C:T	rs2329452	C	T	T	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr7	39554843	39554844	chr7:39554844:A:C	rs78709620	A	C	A	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr7	39605298	39605299	chr7:39605299:G:T	rs2329462	G	T	G	Hoxd9.mouse_homeodomain_1	8	1	+	7.212456609225008	5.746270592944195	GCCATAAAG
chr7	39703367	39703368	chr7:39703368:T:C	rs7776621	T	C	T	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr7	40095078	40095079	chr7:40095079:A:G	rs17538328	A	G	A	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr7	40134176	40134177	chr7:40134177:A:C	rs894579318	A	C	A	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr7	40229983	40229984	chr7:40229984:G:C	rs6969419	G	C	C	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr7	40659307	40659308	chr7:40659308:A:G	rs73122202	A	G	A	Hoxd9.mouse_homeodomain_1	4	1	-	8.287463081002919	5.632416436140341	CCAATAAAA
chr7	40831171	40831172	chr7:40831172:C:T	rs10247275	C	T	C	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr7	40885773	40885774	chr7:40885774:A:G	rs17714729	A	G	A	Hoxd9.mouse_homeodomain_1	5	1	+	8.027213970992095	1.6530242527455408	CACATAAAA
chr7	41006226	41006227	chr7:41006227:G:T	rs11980516	G	T	T	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr7	41010743	41010744	chr7:41010744:C:T	rs148186817	C	T	C	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr7	41328001	41328002	chr7:41328002:G:A	rs73312417	G	A	G	Hoxd9.mouse_homeodomain_1	0	1	+	7.9772278588234515	7.188342824966311	GCAATAAAA
chr7	41604685	41604686	chr7:41604686:T:A	rs1986101	T	A	T	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr7	41875449	41875450	chr7:41875450:C:G	rs17639311	C	G	C	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr7	41975940	41975941	chr7:41975941:A:T	rs80225546	A	T	A	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr7	41997011	41997012	chr7:41997012:T:C	rs182994866	T	C	T	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr7	42151972	42151973	chr7:42151973:C:T	rs3801205	C	T	C	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr7	42151973	42151974	chr7:42151974:G:A	rs7784573	G	A	G	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr7	42167432	42167433	chr7:42167433:A:G	rs3801212	A	G	A	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr7	42230789	42230790	chr7:42230790:G:C	rs117461098	G	C	G	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr7	42340471	42340472	chr7:42340472:A:G	rs2330442	A	G	G	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr7	42432888	42432889	chr7:42432889:C:T	rs76699923	C	T	C	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr7	42432905	42432906	chr7:42432906:G:A	rs7808838	G	A	G	Hoxd9.mouse_homeodomain_1	8	1	+	7.212456609225008	8.678783717710262	GCCATAAAG
chr7	42625755	42625756	chr7:42625756:A:G	rs17172095	A	G	G	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr7	42930933	42930934	chr7:42930934:T:C	rs145533379	T	C	T	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr7	42967757	42967758	chr7:42967758:A:C	rs616429	A	C	C	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr7	43296643	43296644	chr7:43296644:G:T	rs886550	G	T	G	Hoxd9.mouse_homeodomain_1	1	1	-	7.1462160923678635	6.184411123470229	GCCATAAAC
chr7	43439975	43439976	chr7:43439976:A:G	chr7:43439976:A:G	A	G	A	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr7	43459023	43459024	chr7:43459024:G:A	rs6974808	G	A	g	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr7	43461487	43461488	chr7:43461488:G:A	rs3919666	G	A	G	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr7	43464228	43464229	chr7:43464229:A:G	rs61696472	A	G	A	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr7	43528966	43528967	chr7:43528967:G:A	rs55704525	G	A	G	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr7	43559888	43559889	chr7:43559889:C:T	rs12702051	C	T	C	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr7	43649022	43649023	chr7:43649023:G:A	rs2214995	G	A	A	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr7	43727498	43727499	chr7:43727499:G:A	rs2158951	G	A	G	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr7	44369213	44369214	chr7:44369214:T:G	rs10233353	T	G	T	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr7	44589905	44589906	chr7:44589906:G:A	rs117219414	G	A	G	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr7	44729413	44729414	chr7:44729414:T:A	rs799443	T	A	T	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr7	44795964	44795965	chr7:44795965:C:T	rs942082783	C	T	C	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr7	44925310	44925311	chr7:44925311:G:A	rs10951777	G	A	g	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr7	45196735	45196736	chr7:45196736:T:C	rs2527020	T	C	T	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr7	45196740	45196741	chr7:45196741:C:A	rs2527019	C	A	C	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr7	45196765	45196766	chr7:45196766:C:T	rs1294898	C	T	C	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr7	45262099	45262100	chr7:45262100:A:G	rs17805690	A	G	G	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr7	45446522	45446523	chr7:45446523:C:T	rs147898011	C	T	C	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr7	45659381	45659382	chr7:45659382:G:T	rs60202974	G	T	G	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr7	45677636	45677637	chr7:45677637:A:C	rs77043744	A	C	A	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr7	45896091	45896092	chr7:45896092:A:C	rs10234425	A	C	C	Hoxd9.mouse_homeodomain_1	6	1	+	7.9772278588234515	6.230144043982641	GCAATAAAA
chr7	46070579	46070580	chr7:46070580:G:A	rs1525820	G	A	A	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr7	46355115	46355116	chr7:46355116:T:G	rs17172684	T	G	T	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr7	46389509	46389510	chr7:46389510:A:G	rs34175548	A	G	A	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr7	46450798	46450799	chr7:46450799:G:A	rs188651687	G	A	G	Hoxd9.mouse_homeodomain_1	1	1	-	8.409487817756228	7.094685903423221	CCCATTAAA
chr7	46534813	46534814	chr7:46534814:G:C	rs78697847	G	C	g	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr7	46557336	46557337	chr7:46557337:A:G	rs79345840	A	G	A	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr7	46568454	46568455	chr7:46568455:C:T	rs17256477	C	T	c	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr7	46649293	46649294	chr7:46649294:T:C	rs35216710	T	C	T	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr7	46654312	46654313	chr7:46654313:G:A	rs75178246	G	A	G	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr7	46753913	46753914	chr7:46753914:A:G	rs189972923	A	G	A	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr7	46831087	46831088	chr7:46831088:T:C	rs75772849	T	C	T	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr7	46954746	46954747	chr7:46954747:C:T	rs6953890	C	T	T	Hoxd9.mouse_homeodomain_1	0	1	+	8.98901893988973	7.094471634580788	CCCATAAAA
chr7	47026353	47026354	chr7:47026354:A:G	rs4724533	A	G	A	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr7	47083716	47083717	chr7:47083717:A:G	rs34394921	A	G	A	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr7	47154110	47154111	chr7:47154111:G:A	rs10499657	G	A	G	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr7	47181327	47181328	chr7:47181328:C:A	rs112482926	C	A	C	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr7	47347842	47347843	chr7:47347843:C:T	rs67513472	C	T	C	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr7	47374573	47374574	chr7:47374574:A:C	rs2470991	A	C	C	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr7	47460815	47460816	chr7:47460816:G:A	rs571927433	G	A	G	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr7	47474139	47474140	chr7:47474140:A:G	chr7:47474140:A:G	A	G	a	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr7	47474142	47474143	chr7:47474143:C:A	chr7:47474143:C:A	C	A	C	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr7	47556794	47556795	chr7:47556795:G:A	rs80001808	G	A	G	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr7	47557581	47557582	chr7:47557582:T:G	rs117646587	T	G	T	Hoxd9.mouse_homeodomain_1	7	1	-	8.98901893988973	6.099603169859144	CCCATAAAA
chr7	47697866	47697867	chr7:47697867:G:C	rs551503523	G	C	G	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr7	47776804	47776805	chr7:47776805:C:A	rs4339543	C	A	A	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr7	47806769	47806770	chr7:47806770:T:C	rs75886999	T	C	T	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr7	47935410	47935411	chr7:47935411:G:A	rs79266901	G	A	G	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr7	47970357	47970358	chr7:47970358:C:T	rs3176568	C	T	C	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr7	48087196	48087197	chr7:48087197:A:C	rs144480892	A	C	A	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr7	48111795	48111796	chr7:48111796:A:G	rs1288677486	A	G	G	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr7	48111815	48111816	chr7:48111816:A:G	rs10225490	A	G	G	Hoxd9.mouse_homeodomain_1	1	1	+	8.027213970992095	2.5794857111073646	CACATAAAA
chr7	48111840	48111841	chr7:48111841:A:G	rs74933975	A	G	A	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr7	48183419	48183420	chr7:48183420:G:A	rs36175194	G	A	A	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr7	48427321	48427322	chr7:48427322:T:C	rs5028266	T	C	C	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr7	48427328	48427329	chr7:48427329:A:G	rs5028265	A	G	A	Hoxd9.mouse_homeodomain_1	5	1	-	8.409487817756228	7.091711387329735	CCCATTAAA
chr7	48428086	48428087	chr7:48428087:A:T	rs34563223	A	T	A	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr7	48458006	48458007	chr7:48458007:G:C	rs10256255	G	C	C	Hoxd9.mouse_homeodomain_1	0	1	-	8.98901893988973	8.678783717710262	CCCATAAAA
chr7	48658221	48658222	chr7:48658222:C:G	rs4395846	C	G	C	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr7	48938679	48938680	chr7:48938680:T:C	rs6953545	T	C	C	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr7	48939089	48939090	chr7:48939090:A:G	rs74390355	A	G	A	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr7	49273970	49273971	chr7:49273971:A:C	rs10251159	A	C	A	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr7	50144447	50144448	chr7:50144448:A:G	rs55638419	A	G	A	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr7	50405552	50405553	chr7:50405553:A:G	rs6964969	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.099252595576761	6.765173995714267	GCCATTAAA
chr7	50415755	50415756	chr7:50415756:A:G	rs17553022	A	G	A	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr7	50529165	50529166	chr7:50529166:C:T	rs3735273	C	T	C	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr7	50622254	50622255	chr7:50622255:A:G	rs2299150	A	G	A	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr7	50638424	50638425	chr7:50638425:G:T	rs2715112	G	T	G	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr7	50675397	50675398	chr7:50675398:T:C	rs886821	T	C	C	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr7	50680640	50680641	chr7:50680641:T:C	rs2237481	T	C	C	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr7	50681727	50681728	chr7:50681728:A:G	rs2715133	A	G	G	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr7	50836236	50836237	chr7:50836237:A:G	rs4947477	A	G	G	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr7	51066331	51066332	chr7:51066332:C:T	rs11769943	C	T	C	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr7	51080982	51080983	chr7:51080983:T:C	rs150217277	T	C	T	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr7	51081010	51081011	chr7:51081011:G:A	rs75759786	G	A	G	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr7	51447580	51447581	chr7:51447581:G:C	rs74297347	G	C	G	Hoxd9.mouse_homeodomain_1	1	1	-	7.075409217893736	0.6658759891113694	CCCGTTAAA
chr7	51569504	51569505	chr7:51569505:G:A	rs4947375	G	A	G	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr7	51681114	51681115	chr7:51681115:T:C	rs6969619	T	C	T	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr7	51862326	51862327	chr7:51862327:C:T	rs670754	C	T	C	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr7	51979283	51979284	chr7:51979284:G:A	rs389975	G	A	G	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr7	52135661	52135662	chr7:52135662:T:C	rs4388407	T	C	C	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr7	52149444	52149445	chr7:52149445:T:C	rs6951196	T	C	T	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr7	52168060	52168061	chr7:52168061:T:C	rs7790950	T	C	T	Hoxd9.mouse_homeodomain_1	7	1	-	7.241935125048919	0.5381091784571871	CCCATACAA
chr7	52412660	52412661	chr7:52412661:G:C	rs6975756	G	C	G	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr7	52519006	52519007	chr7:52519007:G:A	rs2330062	G	A	G	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr7	52690315	52690316	chr7:52690316:C:G	rs11771883	C	G	C	Hoxd9.mouse_homeodomain_1	1	1	+	7.889898683853121	1.480365455070757	ACCATAAAA
chr7	52761863	52761864	chr7:52761864:T:C	rs17135295	T	C	T	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr7	52853681	52853682	chr7:52853682:T:G	rs74629733	T	G	T	Hoxd9.mouse_homeodomain_1	6	1	-	8.027213970992095	6.2801301561512854	CACATAAAA
chr7	53204942	53204943	chr7:53204943:A:G	rs28756070	A	G	N	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr7	53600384	53600385	chr7:53600385:G:A	rs6955484	G	A	G	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr7	53672617	53672618	chr7:53672618:G:A	rs117291540	G	A	G	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr7	53816754	53816755	chr7:53816755:T:G	rs1919802	T	G	t	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr7	54015343	54015344	chr7:54015344:C:T	rs75722905	C	T	C	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr7	54022390	54022391	chr7:54022391:A:T	rs6954698	A	T	T	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr7	54538573	54538574	chr7:54538574:G:A	rs502859	G	A	A	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr7	54812897	54812898	chr7:54812898:C:T	rs17172397	C	T	C	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr7	54978779	54978780	chr7:54978780:T:C	rs111776517	T	C	T	Hoxd9.mouse_homeodomain_1	7	1	-	7.212456609225008	0.5086306626332764	GCCATAAAG
chr7	54997425	54997426	chr7:54997426:A:G	rs11238344	A	G	G	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr7	55550209	55550210	chr7:55550210:C:T	rs117532590	C	T	C	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr7	55613341	55613342	chr7:55613342:C:T	rs73125183	C	T	C	Hoxd9.mouse_homeodomain_1	1	1	+	6.943160709270972	5.628358794937966	CCCATTAAG
chr7	55641387	55641388	chr7:55641388:A:C	rs79606092	A	C	.	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr7	55662721	55662722	chr7:55662722:C:G	rs4388405	C	G	.	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr7	56235899	56235900	chr7:56235900:A:C	rs12531489	A	C	C	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr7	56238721	56238722	chr7:56238722:G:A	rs77643511	G	A	G	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr7	56351663	56351664	chr7:56351664:T:C	rs4245576	T	C	c	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr7	56476295	56476296	chr7:56476296:G:T	rs561409095	G	T	g	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr7	56485112	56485113	chr7:56485113:G:A	rs6963139	G	A	g	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr7	56961830	56961831	chr7:56961831:T:A	rs62462390	T	A	T	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr7	57013196	57013197	chr7:57013197:T:C	rs62463105	T	C	T	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr7	57013197	57013198	chr7:57013198:G:A	rs62463106	G	A	G	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr7	57915839	57915840	chr7:57915840:A:G	rs8188355	A	G	.	Hoxd9.mouse_homeodomain_1	3	1	+	8.027213970992095	6.693135371129603	CACATAAAA
chr7	57994437	57994438	chr7:57994438:A:C	rs562141999	A	C	.	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr7	60956278	60956279	chr7:60956279:G:A	rs1210154163	G	A	-	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr7	61751892	61751893	chr7:61751893:A:T	rs1237220541	A	T	.	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr7	62376576	62376577	chr7:62376577:A:T	rs879020275	A	T	.	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr7	62377223	62377224	chr7:62377224:T:C	rs1457035238	T	C	.	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr7	62986761	62986762	chr7:62986762:A:G	rs7293646	A	G	.	Hoxd9.mouse_homeodomain_1	7	1	+	7.889898683853121	1.18607273726139	ACCATAAAA
chr7	63193228	63193229	chr7:63193229:T:G	rs1608134	T	G	G	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr7	63900204	63900205	chr7:63900205:G:A	rs150115957	G	A	G	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr7	64311993	64311994	chr7:64311994:A:G	rs73366158	A	G	A	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr7	64315485	64315486	chr7:64315486:C:T	rs73133695	C	T	C	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr7	64665034	64665035	chr7:64665035:C:T	rs4718096	C	T	c	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr7	64689549	64689550	chr7:64689550:C:T	rs3750029	C	T	c	Hoxd9.mouse_homeodomain_1	2	1	+	7.654940340027237	1.1674998824035994	CCCGTAAAA
chr7	64977269	64977270	chr7:64977270:G:A	rs10949955	G	A	g	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr7	65390780	65390781	chr7:65390781:G:A	rs138708558	G	A	g	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr7	65398478	65398479	chr7:65398479:C:T	rs10265083	C	T	c	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr7	65404158	65404159	chr7:65404159:A:G	rs58076080	A	G	-	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr7	65449682	65449683	chr7:65449683:T:G	rs6972850	T	G	N	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr7	65449700	65449701	chr7:65449701:A:T	rs547729287	A	T	a	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr7	66051075	66051076	chr7:66051076:T:C	rs78608404	T	C	.	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr7	66151029	66151030	chr7:66151030:G:A	rs114869770	G	A	G	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr7	66172817	66172818	chr7:66172818:C:G	chr7:66172818:C:G	C	G	C	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr7	66554202	66554203	chr7:66554203:G:A	rs13536	G	A	N	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr7	66697769	66697770	chr7:66697770:A:T	rs6947441	A	T	a	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr7	66921064	66921065	chr7:66921065:C:A	rs537562416	C	A	C	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr7	66977332	66977333	chr7:66977333:A:G	rs74965311	A	G	A	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr7	67006032	67006033	chr7:67006033:G:C	rs35175278	G	C	G	Hoxd9.mouse_homeodomain_1	8	1	+	7.212456609225008	7.1462160923678635	GCCATAAAG
chr7	67129385	67129386	chr7:67129386:G:A	rs1193466522	G	A	G	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr7	67179672	67179673	chr7:67179673:A:G	rs146944549	A	G	A	Hoxd9.mouse_homeodomain_1	4	1	-	7.889898683853121	5.234852038990543	ACCATAAAA
chr7	67192210	67192211	chr7:67192211:G:A	rs2690177	G	A	A	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr7	67303891	67303892	chr7:67303892:T:C	rs9647886	T	C	.	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr7	67350593	67350594	chr7:67350594:G:A	rs56325879	G	A	g	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr7	67485830	67485831	chr7:67485831:G:A	rs6953207	G	A	G	Hoxd9.mouse_homeodomain_1	1	1	-	8.099252595576761	6.784450681243753	GCCATTAAA
chr7	67825558	67825559	chr7:67825559:G:A	rs140957299	G	A	G	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr7	68265552	68265553	chr7:68265553:T:C	rs3113130	T	C	C	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr7	68586192	68586193	chr7:68586193:C:T	rs7808041	C	T	C	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr7	68665119	68665120	chr7:68665120:T:G	chr7:68665120:T:G	T	G	T	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr7	68807745	68807746	chr7:68807746:C:G	rs113931193	C	G	C	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr7	69096237	69096238	chr7:69096238:T:A	rs79770624	T	A	A	Hoxd9.mouse_homeodomain_1	4	1	+	8.027213970992095	1.1853955236614904	CACATAAAA
chr7	69365786	69365787	chr7:69365787:A:G	rs1317000	A	G	G	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr7	69738366	69738367	chr7:69738367:C:A	rs11762049	C	A	C	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr7	69786943	69786944	chr7:69786944:T:A	rs62457240	T	A	T	Hoxd9.mouse_homeodomain_1	1	1	-	8.027213970992095	7.674217025556723	CACATAAAA
chr7	69911736	69911737	chr7:69911737:A:G	rs13224557	A	G	A	Hoxd9.mouse_homeodomain_1	4	1	-	8.027213970992095	5.372167326129518	CACATAAAA
chr7	70355713	70355714	chr7:70355714:A:T	rs114782194	A	T	A	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr7	70373140	70373141	chr7:70373141:G:T	rs11766392	G	T	T	Hoxd9.mouse_homeodomain_1	2	1	-	8.027213970992095	7.325658112105286	CACATAAAA
chr7	70373155	70373156	chr7:70373156:G:T	rs73173575	G	T	G	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr7	70401106	70401107	chr7:70401107:A:G	chr7:70401107:A:G	A	G	A	Hoxd9.mouse_homeodomain_1	4	1	-	7.091711387329735	4.436664742467157	CCCATCAAA
chr7	70470883	70470884	chr7:70470884:T:C	rs12670172	T	C	T	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr7	70630806	70630807	chr7:70630807:A:G	rs74915254	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.409487817756228	7.075409217893736	CCCATTAAA
chr7	70682274	70682275	chr7:70682275:G:A	rs73435043	G	A	g	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr7	70789559	70789560	chr7:70789560:A:G	rs3750172	A	G	A	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr7	71005209	71005210	chr7:71005210:T:C	rs7806679	T	C	T	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr7	71220568	71220569	chr7:71220569:C:T	rs34196015	C	T	C	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr7	71220606	71220607	chr7:71220607:G:A	rs2867044	G	A	A	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr7	71272585	71272586	chr7:71272586:G:A	rs111552604	G	A	G	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr7	71286121	71286122	chr7:71286122:G:T	rs7796585	G	T	T	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr7	71303730	71303731	chr7:71303731:T:A	rs3923569	T	A	T	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr7	71511407	71511408	chr7:71511408:A:G	rs6955186	A	G	A	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr7	71602432	71602433	chr7:71602433:T:G	rs34636742	T	G	T	Hoxd9.mouse_homeodomain_1	4	1	+	8.287463081002919	1.445644633672313	CCAATAAAA
chr7	71729068	71729069	chr7:71729069:G:A	rs145737750	G	A	G	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr7	71900998	71900999	chr7:71900999:A:G	rs61202888	A	G	G	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr7	71952533	71952534	chr7:71952534:G:A	rs10243500	G	A	G	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr7	72110871	72110872	chr7:72110872:C:T	rs73124391	C	T	C	Hoxd9.mouse_homeodomain_1	2	1	+	7.654940340027237	1.1674998824035994	CCCGTAAAA
chr7	72213527	72213528	chr7:72213528:C:T	rs3846985	C	T	C	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr7	72650343	72650344	chr7:72650344:G:A	rs115057602	G	A	G	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr7	73358168	73358169	chr7:73358169:T:G	chr7:73358169:T:G	T	G	T	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr7	73520953	73520954	chr7:73520954:T:C	rs11975221	T	C	A	Hoxd9.mouse_homeodomain_1	5	1	+	8.409487817756228	7.091711387329735	CCCATTAAA
chr7	73671652	73671653	chr7:73671653:G:A	rs62466340	G	A	A	Hoxd9.mouse_homeodomain_1	3	1	+	7.075409217893736	8.409487817756228	CCCGTTAAA
chr7	73683579	73683580	chr7:73683580:G:C	chr7:73683580:G:C	G	C	G	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr7	73683588	73683589	chr7:73683589:C:A	rs113902085	C	A	C	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr7	73809810	73809811	chr7:73809811:G:A	rs1310549356	G	A	G	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr7	73809823	73809824	chr7:73809824:G:A	rs142348291	G	A	G	Hoxd9.mouse_homeodomain_1	0	1	+	8.678783717710262	7.889898683853121	GCCATAAAA
chr7	73828293	73828294	chr7:73828294:G:A	chr7:73828294:G:A	G	A	G	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr7	74526279	74526280	chr7:74526280:T:C	rs3801469	T	C	C	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr7	75659133	75659134	chr7:75659134:T:G	rs2097793	T	G	g	Hoxd9.mouse_homeodomain_1	7	1	-	7.212456609225008	4.323040839194422	GCCATAAAG
chr7	75761880	75761881	chr7:75761881:T:A	rs10280471	T	A	T	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr7	75967673	75967674	chr7:75967674:C:T	rs373632433	C	T	C	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr7	76117922	76117923	chr7:76117923:T:C	rs55812043	T	C	.	Hoxd9.mouse_homeodomain_1	4	1	+	7.716978748812629	5.061932103950051	GACATAAAA
chr7	76235604	76235605	chr7:76235605:C:T	rs76004352	C	T	C	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr7	76419358	76419359	chr7:76419359:T:C	rs10241243	T	C	.	Hoxd9.mouse_homeodomain_1	3	1	-	8.027213970992095	6.693135371129603	CACATAAAA
chr7	76424054	76424055	chr7:76424055:A:G	rs78174570	A	G	.	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr7	77222172	77222173	chr7:77222173:C:A	rs4394326	C	A	C	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr7	77306492	77306493	chr7:77306493:T:C	rs112917812	T	C	C	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr7	77338203	77338204	chr7:77338204:A:C	rs932566623	A	C	A	Hoxd9.mouse_homeodomain_1	6	1	+	7.889898683853121	6.1428148690123106	ACCATAAAA
chr7	77404185	77404186	chr7:77404186:A:G	rs55961211	A	G	A	Hoxd9.mouse_homeodomain_1	5	1	+	7.1462160923678635	0.7720263741213071	GCCATAAAC
chr7	77482179	77482180	chr7:77482180:C:T	rs17154100	C	T	C	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr7	77539067	77539068	chr7:77539068:G:A	rs6960252	G	A	A	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr7	77594026	77594027	chr7:77594027:T:A	rs4729549	T	A	A	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr7	77661859	77661860	chr7:77661860:A:C	chr7:77661860:A:C	A	C	A	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr7	77685500	77685501	chr7:77685501:T:G	rs12113119	T	G	T	Hoxd9.mouse_homeodomain_1	5	1	-	7.34470511784777	5.447397565287774	GCCGTAAAA
chr7	77735218	77735219	chr7:77735219:A:C	rs6465789	A	C	C	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr7	77798623	77798624	chr7:77798624:A:G	rs931009638	A	G	A	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr7	78134727	78134728	chr7:78134728:T:C	rs1465220	T	C	C	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr7	78147910	78147911	chr7:78147911:T:C	rs149442923	T	C	T	Hoxd9.mouse_homeodomain_1	4	1	+	7.889898683853121	5.234852038990543	ACCATAAAA
chr7	78326463	78326464	chr7:78326464:G:C	rs73134505	G	C	G	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr7	78379847	78379848	chr7:78379848:C:T	rs1029819	C	T	T	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr7	78677667	78677668	chr7:78677668:A:G	rs172805	A	G	G	Hoxd9.mouse_homeodomain_1	7	1	+	8.98901893988973	2.285192993297999	CCCATAAAA
chr7	78792617	78792618	chr7:78792618:C:G	rs4730496	C	G	G	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr7	78792618	78792619	chr7:78792619:T:A	rs4730497	T	A	A	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr7	79712359	79712360	chr7:79712360:G:A	rs2714703	G	A	G	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr7	79883091	79883092	chr7:79883092:G:A	rs7797573	G	A	G	Hoxd9.mouse_homeodomain_1	8	1	+	7.212456609225008	8.678783717710262	GCCATAAAG
chr7	80087202	80087203	chr7:80087203:C:A	rs114291654	C	A	C	Hoxd9.mouse_homeodomain_1	0	1	+	8.409487817756228	7.3103675617196195	CCCATTAAA
chr7	80133985	80133986	chr7:80133986:A:G	rs2714465	A	G	A	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr7	80213988	80213989	chr7:80213989:C:T	rs2886611	C	T	C	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr7	80493439	80493440	chr7:80493440:G:C	rs6467215	G	C	C	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr7	80732774	80732775	chr7:80732775:T:C	rs17154368	T	C	T	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr7	80750769	80750770	chr7:80750770:G:A	rs7807132	G	A	G	Hoxd9.mouse_homeodomain_1	1	1	-	7.075409217893736	5.760607303560727	CCCGTTAAA
chr7	80753571	80753572	chr7:80753572:G:A	rs116833313	G	A	G	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr7	80770194	80770195	chr7:80770195:T:C	rs10261267	T	C	C	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr7	80833584	80833585	chr7:80833585:T:C	rs9942709	T	C	T	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr7	80833587	80833588	chr7:80833588:G:A	rs929346	G	A	G	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr7	80918150	80918151	chr7:80918151:G:A	rs75208901	G	A	G	Hoxd9.mouse_homeodomain_1	1	1	-	8.98901893988973	7.674217025556723	CCCATAAAA
chr7	80941554	80941555	chr7:80941555:G:C	rs917191	G	C	G	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr7	81007132	81007133	chr7:81007133:T:C	rs4731988	T	C	T	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr7	81013346	81013347	chr7:81013347:A:G	rs148899026	A	G	A	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr7	81441826	81441827	chr7:81441827:C:A	rs2967908	C	A	A	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr7	81473046	81473047	chr7:81473047:G:C	rs58905171	G	C	C	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr7	81594772	81594773	chr7:81594773:T:G	rs35026258	T	G	T	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr7	81972702	81972703	chr7:81972703:T:C	rs16885329	T	C	T	Hoxd9.mouse_homeodomain_1	4	1	+	6.943160709270972	4.288114064408394	CCCATTAAG
chr7	81972717	81972718	chr7:81972718:C:G	rs1229506	C	G	C	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr7	81973276	81973277	chr7:81973277:C:G	rs37073	C	G	C	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr7	82192272	82192273	chr7:82192273:G:A	rs13235513	G	A	G	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr7	82212287	82212288	chr7:82212288:A:C	rs77007797	A	C	C	Hoxd9.mouse_homeodomain_1	6	1	+	7.716978748812629	5.969894933971817	GACATAAAA
chr7	82228307	82228308	chr7:82228308:C:A	rs2887117	C	A	C	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr7	82265919	82265920	chr7:82265920:C:A	rs38565	C	A	C	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr7	82544524	82544525	chr7:82544525:G:A	rs75651940	G	A	G	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr7	82549244	82549245	chr7:82549245:T:C	rs17156412	T	C	C	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr7	82705007	82705008	chr7:82705008:A:G	rs8180764	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.287463081002919	6.953384481140425	CCAATAAAA
chr7	82850775	82850776	chr7:82850776:C:T	rs2522844	C	T	T	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr7	82878894	82878895	chr7:82878895:A:G	rs10243348	A	G	G	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr7	83411047	83411048	chr7:83411048:T:G	rs2723042	T	G	G	Hoxd9.mouse_homeodomain_1	7	1	-	8.98901893988973	6.099603169859144	CCCATAAAA
chr7	83599476	83599477	chr7:83599477:A:C	rs10246409	A	C	A	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr7	83936709	83936710	chr7:83936710:G:A	rs696874	G	A	A	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr7	83938105	83938106	chr7:83938106:C:T	rs10277573	C	T	C	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr7	84009994	84009995	chr7:84009995:C:T	rs13241380	C	T	T	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr7	84041944	84041945	chr7:84041945:C:T	rs10499879	C	T	C	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr7	84043956	84043957	chr7:84043957:T:C	rs77234957	T	C	T	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr7	84083880	84083881	chr7:84083881:G:T	rs7801235	G	T	G	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr7	84331612	84331613	chr7:84331613:C:T	rs73386942	C	T	C	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr7	84331645	84331646	chr7:84331646:A:G	rs78477161	A	G	A	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr7	84362707	84362708	chr7:84362708:G:C	rs568973	G	C	C	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr7	84370076	84370077	chr7:84370077:C:A	rs1228861	C	A	A	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr7	84513170	84513171	chr7:84513171:A:G	rs1228968	A	G	G	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr7	84514006	84514007	chr7:84514007:A:G	rs6943117	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.409487817756228	7.075409217893736	CCCATTAAA
chr7	84535769	84535770	chr7:84535770:C:T	rs151268468	C	T	C	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr7	84639211	84639212	chr7:84639212:T:G	rs4291215	T	G	G	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr7	85023320	85023321	chr7:85023321:T:C	rs139025556	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.027213970992095	6.693135371129603	CACATAAAA
chr7	85154703	85154704	chr7:85154704:C:T	rs1019204	C	T	T	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr7	85154736	85154737	chr7:85154737:C:T	rs1019203	C	T	C	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr7	86479755	86479756	chr7:86479756:A:G	rs1507596	A	G	A	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr7	87236838	87236839	chr7:87236839:A:G	rs77633631	A	G	A	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr7	87427497	87427498	chr7:87427498:G:A	rs114595831	G	A	G	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr7	87874326	87874327	chr7:87874327:A:T	rs754665430	A	T	A	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr7	87968164	87968165	chr7:87968165:G:C	rs1688902	G	C	C	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr7	88005199	88005200	chr7:88005200:G:A	rs2023533	G	A	A	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr7	88111468	88111469	chr7:88111469:A:T	rs12668809	A	T	A	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr7	88111914	88111915	chr7:88111915:C:A	rs2299198	C	A	C	Hoxd9.mouse_homeodomain_1	0	1	+	8.287463081002919	7.188342824966311	CCAATAAAA
chr7	88330706	88330707	chr7:88330707:A:C	rs6954534	A	C	C	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr7	88432197	88432198	chr7:88432198:C:T	rs7792197	C	T	c	Hoxd9.mouse_homeodomain_1	2	1	+	7.34470511784777	0.8572646602241328	GCCGTAAAA
chr7	88683575	88683576	chr7:88683576:C:G	rs2538919	C	G	C	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr7	88880319	88880320	chr7:88880320:T:C	rs7781288	T	C	T	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr7	89011770	89011771	chr7:89011771:C:T	rs6973396	C	T	C	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr7	89011795	89011796	chr7:89011796:C:G	rs6973409	C	G	G	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr7	89183672	89183673	chr7:89183673:A:G	rs2189054	A	G	A	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr7	89246771	89246772	chr7:89246772:T:C	rs138289014	T	C	T	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr7	89801273	89801274	chr7:89801274:T:A	rs10241034	T	A	A	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr7	90229586	90229587	chr7:90229587:T:C	rs183168	T	C	C	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr7	90345549	90345550	chr7:90345550:G:A	rs42644	G	A	.	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr7	90433785	90433786	chr7:90433786:A:C	rs11761195	A	C	A	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr7	90646451	90646452	chr7:90646452:C:G	rs17866362	C	G	C	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr7	90661663	90661664	chr7:90661664:C:T	rs145013912	C	T	C	Hoxd9.mouse_homeodomain_1	3	1	-	7.075409217893736	8.409487817756228	CCCGTTAAA
chr7	91088970	91088971	chr7:91088971:C:T	rs705350	C	T	C	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr7	91159815	91159816	chr7:91159816:G:T	rs34185925	G	T	T	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr7	91307085	91307086	chr7:91307086:G:A	rs17163782	G	A	A	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr7	91925141	91925142	chr7:91925142:C:T	rs10251036	C	T	C	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr7	92697711	92697712	chr7:92697712:A:G	rs3731326	A	G	A	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr7	93012403	93012404	chr7:93012404:A:T	rs79401725	A	T	A	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr7	93162173	93162174	chr7:93162174:C:A	rs73415303	C	A	C	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr7	93623087	93623088	chr7:93623088:T:C	rs957728	T	C	T	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr7	93883865	93883866	chr7:93883866:G:T	rs992311	G	T	T	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr7	93903054	93903055	chr7:93903055:C:T	rs11973082	C	T	C	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr7	93903061	93903062	chr7:93903062:C:T	rs180281	C	T	T	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr7	93903096	93903097	chr7:93903097:G:A	rs11973162	G	A	G	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr7	93920894	93920895	chr7:93920895:G:C	rs180240	G	C	G	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr7	94348194	94348195	chr7:94348195:A:G	rs6966375	A	G	A	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr7	94643868	94643869	chr7:94643869:C:T	rs34140372	C	T	C	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr7	94856675	94856676	chr7:94856676:A:C	rs10233265	A	C	A	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr7	95102882	95102883	chr7:95102883:A:G	rs34197770	A	G	A	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr7	95213295	95213296	chr7:95213296:G:A	rs147047630	G	A	G	Hoxd9.mouse_homeodomain_1	0	1	-	8.287463081002919	6.392915775693977	CCAATAAAA
chr7	95213308	95213309	chr7:95213309:T:C	rs138381576	T	C	T	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr7	95249500	95249501	chr7:95249501:A:G	rs73222002	A	G	A	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr7	95264020	95264021	chr7:95264021:A:G	rs10280999	A	G	A	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr7	95631677	95631678	chr7:95631678:C:A	rs6970933	C	A	A	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr7	95658947	95658948	chr7:95658948:C:T	rs10225474	C	T	t	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr7	95980441	95980442	chr7:95980442:T:G	rs4729229	T	G	T	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr7	96247374	96247375	chr7:96247375:T:C	rs62472365	T	C	T	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr7	96698628	96698629	chr7:96698629:C:T	rs4729277	C	T	T	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr7	97008954	97008955	chr7:97008955:A:C	rs3801289	A	C	A	Hoxd9.mouse_homeodomain_1	7	1	+	7.889898683853121	5.000482913822536	ACCATAAAA
chr7	97298778	97298779	chr7:97298779:A:G	rs2394620	A	G	A	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr7	97298786	97298787	chr7:97298787:G:A	rs77519619	G	A	G	Hoxd9.mouse_homeodomain_1	2	1	-	7.716978748812629	1.2295382911889927	GACATAAAA
chr7	97639637	97639638	chr7:97639638:T:G	rs13437791	T	G	G	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr7	98282570	98282571	chr7:98282571:C:T	rs4448203	C	T	C	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr7	98383794	98383795	chr7:98383795:A:C	rs10953259	A	C	C	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr7	98708178	98708179	chr7:98708179:A:T	rs73147450	A	T	A	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr7	98953528	98953529	chr7:98953529:C:T	rs3815232	C	T	T	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr7	99153732	99153733	chr7:99153733:C:T	rs191484559	C	T	C	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr7	99184750	99184751	chr7:99184751:G:A	rs114868477	G	A	G	Hoxd9.mouse_homeodomain_1	1	1	-	8.409487817756228	7.094685903423221	CCCATTAAA
chr7	99326638	99326639	chr7:99326639:T:C	rs149089271	T	C	T	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr7	99554879	99554880	chr7:99554880:T:C	rs892090516	T	C	T	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr7	100800894	100800895	chr7:100800895:C:T	rs314346	C	T	C	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr7	100813655	100813656	chr7:100813656:T:C	rs314359	T	C	C	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr7	100851935	100851936	chr7:100851936:C:T	rs1030956819	C	T	C	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr7	100968559	100968560	chr7:100968560:T:G	rs13233610	T	G	T	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr7	101051572	101051573	chr7:101051573:G:A	rs67328257	G	A	G	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr7	101161148	101161149	chr7:101161149:C:T	rs1048365	C	T	C	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr7	101162226	101162227	chr7:101162227:G:A	rs10953325	G	A	G	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr7	101383135	101383136	chr7:101383136:C:G	rs556448804	C	G	C	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr7	101469439	101469440	chr7:101469440:G:A	rs883910	G	A	G	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr7	101472757	101472758	chr7:101472758:G:C	rs1558007	G	C	G	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr7	101482425	101482426	chr7:101482426:A:G	rs34571822	A	G	G	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr7	101483065	101483066	chr7:101483066:C:T	rs34682212	C	T	T	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr7	101532179	101532180	chr7:101532180:A:G	rs17386098	A	G	A	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr7	101565490	101565491	chr7:101565491:G:A	rs1174	G	A	G	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr7	101991349	101991350	chr7:101991350:T:C	chr7:101991350:T:C	T	C	t	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr7	102164847	102164848	chr7:102164848:G:A	rs446513	G	A	G	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr7	102713568	102713569	chr7:102713569:T:C	rs1315714495	T	C	N	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr7	102838687	102838688	chr7:102838688:G:A	rs78538584	G	A	G	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr7	102890978	102890979	chr7:102890979:A:C	rs79124221	A	C	a	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr7	102890981	102890982	chr7:102890982:G:A	rs535556810	G	A	g	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr7	103571775	103571776	chr7:103571776:G:A	rs362733	G	A	A	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr7	103860051	103860052	chr7:103860052:C:T	rs39406	C	T	C	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr7	103887532	103887533	chr7:103887533:G:A	rs10257449	G	A	G	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr7	103889339	103889340	chr7:103889340:A:G	rs6980344	A	G	G	Hoxd9.mouse_homeodomain_1	6	1	+	6.943160709270972	0.2393347626792411	CCCATTAAG
chr7	103895351	103895352	chr7:103895352:G:C	rs79023441	G	C	G	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr7	103908951	103908952	chr7:103908952:C:A	rs73183749	C	A	C	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr7	104092816	104092817	chr7:104092817:G:A	rs10276148	G	A	A	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr7	104255476	104255477	chr7:104255477:T:G	rs4729985	T	G	G	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr7	104366726	104366727	chr7:104366727:A:C	rs7792363	A	C	A	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr7	104382883	104382884	chr7:104382884:G:T	rs1468144	G	T	G	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr7	104987257	104987258	chr7:104987258:C:T	rs75351153	C	T	c	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr7	105157421	105157422	chr7:105157422:C:T	rs376650036	C	T	C	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr7	105562619	105562620	chr7:105562620:C:T	rs7384067	C	T	C	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr7	105773475	105773476	chr7:105773476:C:A	rs17152107	C	A	A	Hoxd9.mouse_homeodomain_1	0	1	-	8.099252595576761	6.514940512447287	GCCATTAAA
chr7	105780998	105780999	chr7:105780999:C:T	rs4730105	C	T	C	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr7	105995593	105995594	chr7:105995594:A:T	rs2526976	A	T	T	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr7	106068151	106068152	chr7:106068152:C:T	rs757667	C	T	T	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr7	106358442	106358443	chr7:106358443:T:C	rs17152960	T	C	T	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr7	106450772	106450773	chr7:106450773:C:A	rs78828664	C	A	C	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr7	106461171	106461172	chr7:106461172:G:C	rs7795650	G	C	C	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr7	106534632	106534633	chr7:106534633:C:A	rs2893655	C	A	T	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr7	106534654	106534655	chr7:106534655:G:A	rs2893656	G	A	A	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr7	106679302	106679303	chr7:106679303:C:A	rs78105219	C	A	C	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr7	106844376	106844377	chr7:106844377:C:T	rs117046255	C	T	c	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr7	107168460	107168461	chr7:107168461:G:C	rs977645070	G	C	G	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr7	107287007	107287008	chr7:107287008:C:G	rs546064006	C	G	C	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr7	107364800	107364801	chr7:107364801:T:C	rs17154040	T	C	T	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr7	107436579	107436580	chr7:107436580:T:C	rs79340623	T	C	T	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr7	107564493	107564494	chr7:107564494:C:A	rs145603444	C	A	C	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr7	107581383	107581384	chr7:107581384:A:G	rs116008940	A	G	A	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr7	107597077	107597078	chr7:107597078:G:A	rs10277303	G	A	G	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr7	107768356	107768357	chr7:107768357:G:A	rs41664	G	A	A	Hoxd9.mouse_homeodomain_1	1	1	-	8.98901893988973	7.674217025556723	CCCATAAAA
chr7	107815792	107815793	chr7:107815793:C:A	rs28378505	C	A	C	Hoxd9.mouse_homeodomain_1	0	1	-	7.9772278588234515	6.392915775693977	GCAATAAAA
chr7	107920709	107920710	chr7:107920710:T:C	rs2108223	T	C	C	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr7	107922511	107922512	chr7:107922512:T:G	rs6466208	T	G	G	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr7	107932808	107932809	chr7:107932809:T:G	rs881176	T	G	T	Hoxd9.mouse_homeodomain_1	4	1	+	7.716978748812629	0.875160301482023	GACATAAAA
chr7	107932822	107932823	chr7:107932823:C:A	rs881177	C	A	C	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr7	108069677	108069678	chr7:108069678:C:T	rs11974886	C	T	T	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr7	108093410	108093411	chr7:108093411:C:T	rs94604	C	T	T	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr7	108233498	108233499	chr7:108233499:T:C	rs2267877	T	C	T	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr7	108454653	108454654	chr7:108454654:T:C	rs1221791431	T	C	T	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr7	108870535	108870536	chr7:108870536:T:C	rs77815726	T	C	T	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr7	109502061	109502062	chr7:109502062:G:T	rs78225396	G	T	G	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr7	109714451	109714452	chr7:109714452:G:A	rs10237135	G	A	G	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr7	109714463	109714464	chr7:109714464:C:T	rs1517178	C	T	T	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr7	110157651	110157652	chr7:110157652:C:T	rs537719732	C	T	C	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr7	110795545	110795546	chr7:110795546:T:C	rs1950004	T	C	T	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr7	111313227	111313228	chr7:111313228:A:C	rs1024550181	A	C	A	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr7	111313246	111313247	chr7:111313247:T:A	rs2110309	T	A	T	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr7	111343947	111343948	chr7:111343948:C:T	rs37648	C	T	T	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr7	111540487	111540488	chr7:111540488:C:A	rs2613590	C	A	A	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr7	111998106	111998107	chr7:111998107:G:C	rs76827463	G	C	G	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr7	112025647	112025648	chr7:112025648:A:C	rs9649349	A	C	A	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr7	112079788	112079789	chr7:112079789:A:C	rs10487338	A	C	A	Hoxd9.mouse_homeodomain_1	2	1	+	8.287463081002919	8.98901893988973	CCAATAAAA
chr7	112101416	112101417	chr7:112101417:C:G	rs166313	C	G	c	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr7	112144103	112144104	chr7:112144104:G:T	rs17159305	G	T	G	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr7	112173542	112173543	chr7:112173543:C:T	rs11768012	C	T	C	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr7	112199317	112199318	chr7:112199318:C:T	rs12705816	C	T	C	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr7	112444741	112444742	chr7:112444742:A:T	rs4727770	A	T	A	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr7	112444742	112444743	chr7:112444743:A:C	rs2396539	A	C	A	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr7	112463444	112463445	chr7:112463445:G:A	rs3128388	G	A	G	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr7	112482584	112482585	chr7:112482585:C:A	rs3128383	C	A	A	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr7	112567407	112567408	chr7:112567408:C:T	rs3111441	C	T	T	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr7	112572487	112572488	chr7:112572488:A:G	rs3111438	A	G	A	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr7	112985814	112985815	chr7:112985815:C:T	rs6466426	C	T	C	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr7	113371655	113371656	chr7:113371656:T:C	rs188128383	T	C	T	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr7	113371669	113371670	chr7:113371670:T:C	rs55957513	T	C	C	Hoxd9.mouse_homeodomain_1	6	1	-	8.099252595576761	1.3954266489850298	GCCATTAAA
chr7	113806143	113806144	chr7:113806144:C:T	rs721996	C	T	C	Hoxd9.mouse_homeodomain_1	2	1	+	6.943160709270972	0.4557202516473358	CCCATTAAG
chr7	113831975	113831976	chr7:113831976:C:A	rs12333960	C	A	A	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr7	114042633	114042634	chr7:114042634:C:T	rs28485905	C	T	T	Hoxd9.mouse_homeodomain_1	0	1	-	7.716978748812629	6.928093714955487	GACATAAAA
chr7	114048945	114048946	chr7:114048946:T:C	rs12533776	T	C	C	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr7	114657124	114657125	chr7:114657125:G:A	rs936145	G	A	G	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr7	115162853	115162854	chr7:115162854:A:C	rs2396786	A	C	C	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr7	115442351	115442352	chr7:115442352:A:G	rs12666306	A	G	A	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr7	116378798	116378799	chr7:116378799:T:C	rs1633717	T	C	C	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr7	116399896	116399897	chr7:116399897:A:C	rs1039002730	A	C	A	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr7	116499211	116499212	chr7:116499212:A:G	rs145634364	A	G	A	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr7	116844056	116844057	chr7:116844057:C:T	rs41782	C	T	T	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr7	117946367	117946368	chr7:117946368:C:A	rs73716380	C	A	C	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr7	117998484	117998485	chr7:117998485:A:C	rs4141369	A	C	C	Hoxd9.mouse_homeodomain_1	5	1	+	7.716978748812629	5.819671196252634	GACATAAAA
chr7	118195893	118195894	chr7:118195894:A:G	rs74723860	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.409487817756228	7.075409217893736	CCCATTAAA
chr7	118680303	118680304	chr7:118680304:G:T	rs4730885	G	T	T	Hoxd9.mouse_homeodomain_1	1	1	-	8.287463081002919	7.325658112105286	CCAATAAAA
chr7	120344309	120344310	chr7:120344310:A:G	rs10488287	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.027213970992095	6.693135371129603	CACATAAAA
chr7	120779899	120779900	chr7:120779900:G:T	rs117934525	G	T	g	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr7	120825647	120825648	chr7:120825648:T:C	rs181085346	T	C	T	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr7	121015440	121015441	chr7:121015441:T:G	rs112499241	T	G	T	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr7	121021796	121021797	chr7:121021797:G:A	rs10953923	G	A	G	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr7	121098214	121098215	chr7:121098215:A:G	rs1005400	A	G	A	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr7	121360876	121360877	chr7:121360877:A:G	rs7808155	A	G	A	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr7	121481183	121481184	chr7:121481184:A:G	rs4451245	A	G	G	Hoxd9.mouse_homeodomain_1	8	1	+	8.027213970992095	6.560886862506841	CACATAAAA
chr7	121505871	121505872	chr7:121505872:C:T	rs10258506	C	T	C	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr7	121544304	121544305	chr7:121544305:T:G	rs74437937	T	G	T	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr7	121842974	121842975	chr7:121842975:C:A	rs58970730	C	A	C	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr7	122146547	122146548	chr7:122146548:C:T	rs76325511	C	T	C	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr7	122688756	122688757	chr7:122688757:G:A	rs67327643	G	A	G	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr7	122748606	122748607	chr7:122748607:T:C	rs13226441	T	C	T	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr7	122768757	122768758	chr7:122768758:T:C	rs13235728	T	C	T	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr7	123198807	123198808	chr7:123198808:T:C	rs1880180	T	C	C	Hoxd9.mouse_homeodomain_1	4	1	+	6.943160709270972	4.288114064408394	CCCATTAAG
chr7	123275657	123275658	chr7:123275658:C:T	rs9641701	C	T	C	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr7	123295585	123295586	chr7:123295586:A:C	rs12706507	A	C	A	Hoxd9.mouse_homeodomain_1	4	1	-	7.45645131454733	0.614632867216724	CCCATAAAC
chr7	123682724	123682725	chr7:123682725:G:C	rs17695264	G	C	G	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr7	124020160	124020161	chr7:124020161:A:T	rs4731136	A	T	A	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr7	124042786	124042787	chr7:124042787:A:C	rs73230009	A	C	A	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr7	124738030	124738031	chr7:124738031:A:G	rs145870240	A	G	A	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr7	124782211	124782212	chr7:124782212:A:G	rs886704	A	G	A	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr7	125847914	125847915	chr7:125847915:C:T	rs7793039	C	T	T	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr7	125940108	125940109	chr7:125940109:A:C	rs117786475	A	C	A	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr7	126151845	126151846	chr7:126151846:C:T	rs553952	C	T	T	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr7	126578690	126578691	chr7:126578691:T:C	rs2299468	T	C	T	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr7	126685992	126685993	chr7:126685993:C:G	rs139453727	C	G	C	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr7	126724262	126724263	chr7:126724263:C:T	rs2237764	C	T	C	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr7	126994044	126994045	chr7:126994045:A:G	rs10265258	A	G	G	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr7	126994056	126994057	chr7:126994057:G:C	rs10236227	G	C	G	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr7	126994082	126994083	chr7:126994083:C:T	rs10236120	C	T	C	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr7	127708847	127708848	chr7:127708848:A:G	rs753555207	A	G	A	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr7	127718396	127718397	chr7:127718397:G:A	chr7:127718397:G:A	G	A	G	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr7	127781467	127781468	chr7:127781468:G:T	rs1038518852	G	T	G	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr7	127865701	127865702	chr7:127865702:A:C	rs35154268	A	C	A	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr7	127891159	127891160	chr7:127891160:G:C	rs17151488	G	C	G	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr7	127907992	127907993	chr7:127907993:A:C	rs376826192	A	C	A	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr7	128117077	128117078	chr7:128117078:G:A	rs144134609	G	A	G	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr7	128117080	128117081	chr7:128117081:C:A	rs556290841	C	A	C	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr7	128137388	128137389	chr7:128137389:G:A	rs73226606	G	A	G	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr7	128146207	128146208	chr7:128146208:T:C	rs322735	T	C	C	Hoxd9.mouse_homeodomain_1	8	1	-	8.98901893988973	7.522691831404475	CCCATAAAA
chr7	128210601	128210602	chr7:128210602:G:A	rs1451006	G	A	G	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr7	128387963	128387964	chr7:128387964:C:T	rs544333473	C	T	C	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr7	128728728	128728729	chr7:128728729:G:T	rs76676675	G	T	G	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr7	128874979	128874980	chr7:128874980:G:A	rs76031198	G	A	G	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr7	128961709	128961710	chr7:128961710:T:G	rs112659365	T	G	T	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr7	129168826	129168827	chr7:129168827:C:A	rs116711852	C	A	C	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr7	129362765	129362766	chr7:129362766:A:G	rs75954998	A	G	A	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr7	129389251	129389252	chr7:129389252:A:G	rs10954231	A	G	A	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr7	129391400	129391401	chr7:129391401:G:T	rs4731572	G	T	T	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr7	129575053	129575054	chr7:129575054:G:T	rs77186829	G	T	G	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr7	129595189	129595190	chr7:129595190:G:A	rs28502851	G	A	G	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr7	129801695	129801696	chr7:129801696:A:C	rs12334241	A	C	C	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr7	129801695	129801696	chr7:129801696:A:T	chr7:129801696:A:T	A	T	C	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr7	129864474	129864475	chr7:129864475:T:C	rs78222591	T	C	T	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr7	129993661	129993662	chr7:129993662:A:G	rs117987951	A	G	G	Hoxd9.mouse_homeodomain_1	3	1	+	7.1462160923678635	5.81213749250537	GCCATAAAC
chr7	130070213	130070214	chr7:130070214:A:T	rs181721718	A	T	A	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr7	130077867	130077868	chr7:130077868:T:C	rs138365213	T	C	T	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr7	130352891	130352892	chr7:130352892:G:C	rs74705727	G	C	G	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr7	130364916	130364917	chr7:130364917:A:G	rs11767377	A	G	A	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr7	130384168	130384169	chr7:130384169:A:G	rs741486	A	G	A	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr7	130441376	130441377	chr7:130441377:C:T	rs752730610	C	T	C	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr7	130566589	130566590	chr7:130566590:G:A	rs1009770490	G	A	G	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr7	130787685	130787686	chr7:130787686:A:G	rs4731707	A	G	A	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr7	130804400	130804401	chr7:130804401:C:A	rs7806539	C	A	C	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr7	130904233	130904234	chr7:130904234:A:G	rs2895195	A	G	A	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr7	130905727	130905728	chr7:130905728:A:G	rs188451935	A	G	A	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr7	130982563	130982564	chr7:130982564:A:C	rs205752	A	C	A	Hoxd9.mouse_homeodomain_1	6	1	+	7.522691831404475	5.775608016563663	CCCATAAAG
chr7	131053222	131053223	chr7:131053223:T:G	rs2015210	T	G	T	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr7	131111137	131111138	chr7:131111138:T:A	rs1439796	T	A	T	Hoxd9.mouse_homeodomain_1	5	1	-	7.716978748812629	7.137447626679127	GACATAAAA
chr7	131238898	131238899	chr7:131238899:A:G	chr7:131238899:A:G	A	G	A	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr7	131357540	131357541	chr7:131357541:C:T	rs149956555	C	T	C	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr7	132095495	132095496	chr7:132095496:G:T	rs13224052	G	T	g	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr7	132431075	132431076	chr7:132431076:T:C	rs277482	T	C	C	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr7	132690735	132690736	chr7:132690736:C:T	rs602181	C	T	C	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr7	132690767	132690768	chr7:132690768:T:A	rs602217	T	A	A	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr7	132799290	132799291	chr7:132799291:C:T	rs56009006	C	T	C	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr7	133252640	133252641	chr7:133252641:A:G	rs113408432	A	G	A	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr7	133462447	133462448	chr7:133462448:A:G	rs28533976	A	G	A	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr7	133613540	133613541	chr7:133613541:A:G	rs73726935	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	7.241935125048919	5.907856525186427	CCCATACAA
chr7	133934232	133934233	chr7:133934233:A:G	rs6954610	A	G	G	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr7	134342604	134342605	chr7:134342605:C:T	rs2346978	C	T	C	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr7	134356330	134356331	chr7:134356331:C:T	rs4728320	C	T	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.654940340027237	8.98901893988973	CCCGTAAAA
chr7	134409283	134409284	chr7:134409284:C:A	rs1791002	C	A	C	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr7	134547949	134547950	chr7:134547950:C:T	rs181278073	C	T	C	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr7	134873507	134873508	chr7:134873508:A:G	rs138803614	A	G	A	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr7	135312954	135312955	chr7:135312955:T:C	rs35398463	T	C	T	Hoxd9.mouse_homeodomain_1	4	1	+	6.943160709270972	4.288114064408394	CCCATTAAG
chr7	135334171	135334172	chr7:135334172:G:A	rs4075517	G	A	G	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr7	135548342	135548343	chr7:135548343:A:G	rs3112384	A	G	G	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr7	136266521	136266522	chr7:136266522:A:C	rs560758215	A	C	A	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr7	136533548	136533549	chr7:136533549:A:G	rs35477293	A	G	A	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr7	137120888	137120889	chr7:137120889:A:G	rs57126425	A	G	A	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr7	137304875	137304876	chr7:137304876:G:A	rs543837112	G	A	G	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr7	137388512	137388513	chr7:137388513:C:T	rs13230189	C	T	T	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr7	137474967	137474968	chr7:137474968:T:C	rs76650527	T	C	T	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr7	137522674	137522675	chr7:137522675:C:T	rs28711988	C	T	T	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr7	137743008	137743009	chr7:137743009:C:T	rs10215033	C	T	C	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr7	137757753	137757754	chr7:137757754:G:A	rs2113426	G	A	G	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr7	137873509	137873510	chr7:137873510:T:C	rs74831209	T	C	T	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr7	137877650	137877651	chr7:137877651:T:G	rs6958842	T	G	T	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr7	137890715	137890716	chr7:137890716:G:A	rs2007564	G	A	A	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr7	138169328	138169329	chr7:138169329:C:T	rs775777172	C	T	C	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr7	138195014	138195015	chr7:138195015:A:G	rs148635458	A	G	A	Hoxd9.mouse_homeodomain_1	7	1	+	7.9772278588234515	1.2734019122317202	GCAATAAAA
chr7	138195034	138195035	chr7:138195035:C:A	rs28480624	C	A	C	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr7	138328668	138328669	chr7:138328669:C:T	rs11769851	C	T	c	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr7	138396784	138396785	chr7:138396785:C:T	rs7791846	C	T	T	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr7	138459511	138459512	chr7:138459512:T:C	rs7798391	T	C	C	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr7	138756337	138756338	chr7:138756338:A:C	rs11764089	A	C	A	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr7	138819959	138819960	chr7:138819960:C:T	rs12668843	C	T	C	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr7	138856404	138856405	chr7:138856405:C:A	rs1993068	C	A	A	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr7	138937502	138937503	chr7:138937503:T:A	rs6958124	T	A	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.212456609225008	5.2089754724163635	GCCATAAAG
chr7	138948594	138948595	chr7:138948595:G:A	rs73168966	G	A	G	Hoxd9.mouse_homeodomain_1	0	1	-	8.98901893988973	7.094471634580788	CCCATAAAA
chr7	138951617	138951618	chr7:138951618:T:C	rs2774971	T	C	C	Hoxd9.mouse_homeodomain_1	4	1	+	8.98901893988973	6.333972295027152	CCCATAAAA
chr7	139028092	139028093	chr7:139028093:A:G	rs6467820	A	G	G	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr7	139087216	139087217	chr7:139087217:T:C	rs79200625	T	C	T	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr7	139359219	139359220	chr7:139359220:T:C	rs79320693	T	C	T	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr7	139361463	139361464	chr7:139361464:T:C	rs3922848	T	C	C	Hoxd9.mouse_homeodomain_1	8	1	-	7.9772278588234515	6.510900750338196	GCAATAAAA
chr7	139916864	139916865	chr7:139916865:A:G	rs115232466	A	G	A	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr7	139991125	139991126	chr7:139991126:C:T	rs146339002	C	T	c	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr7	140158719	140158720	chr7:140158720:C:G	rs6943811	C	G	G	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr7	140446764	140446765	chr7:140446765:T:C	rs28832645	T	C	C	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr7	140565633	140565634	chr7:140565634:T:C	rs685182	T	C	C	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr7	140578957	140578958	chr7:140578958:G:T	rs269216	G	T	G	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr7	141301246	141301247	chr7:141301247:G:A	rs4726447	G	A	G	Hoxd9.mouse_homeodomain_1	8	1	-	7.45645131454733	6.056505815123662	CCCATAAAC
chr7	141356548	141356549	chr7:141356549:C:T	rs6965337	C	T	C	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr7	141381724	141381725	chr7:141381725:C:T	rs10156215	C	T	C	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr7	141511681	141511682	chr7:141511682:G:A	rs112916547	G	A	G	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr7	141875110	141875111	chr7:141875111:C:T	rs12668089	C	T	c	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr7	142134881	142134882	chr7:142134882:C:G	rs11982374	C	G	C	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr7	142162240	142162241	chr7:142162241:A:G	rs4341084	A	G	G	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr7	142346099	142346100	chr7:142346100:A:C	chr7:142346100:A:C	A	C	A	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr7	142431605	142431606	chr7:142431606:A:G	rs11768792	A	G	A	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr7	142461793	142461794	chr7:142461794:T:C	rs2855958	T	C	.	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr7	142666087	142666088	chr7:142666088:A:G	rs4726553	A	G	A	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr7	142666088	142666089	chr7:142666089:T:C	rs4726554	T	C	T	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr7	142802724	142802725	chr7:142802725:T:G	rs11327	T	G	G	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr7	142954993	142954994	chr7:142954994:A:G	chr7:142954994:A:G	A	G	A	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr7	143333803	143333804	chr7:143333804:C:T	rs4726606	C	T	T	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr7	143458886	143458887	chr7:143458887:C:T	rs141244191	C	T	C	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr7	144011137	144011138	chr7:144011138:A:T	rs6944350	A	T	T	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr7	144256046	144256047	chr7:144256047:C:T	rs58396792	C	T	N	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr7	144442325	144442326	chr7:144442326:G:A	rs62483108	G	A	G	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr7	144520000	144520001	chr7:144520001:C:T	rs10248004	C	T	C	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr7	144723460	144723461	chr7:144723461:G:T	rs552890131	G	T	G	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr7	145584500	145584501	chr7:145584501:C:T	rs13226596	C	T	T	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr7	146260607	146260608	chr7:146260608:A:T	rs813908	A	T	T	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr7	146434250	146434251	chr7:146434251:A:G	rs12703814	A	G	A	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr7	146797374	146797375	chr7:146797375:A:G	rs13233140	A	G	A	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr7	146875183	146875184	chr7:146875184:G:A	rs6942401	G	A	A	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr7	147070736	147070737	chr7:147070737:C:G	rs10260427	C	G	G	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr7	147250173	147250174	chr7:147250174:G:A	rs117809481	G	A	G	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr7	147376270	147376271	chr7:147376271:G:A	rs10250570	G	A	A	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr7	147407065	147407066	chr7:147407066:C:G	rs116581992	C	G	C	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr7	147407066	147407067	chr7:147407067:C:A	rs73158357	C	A	C	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr7	147407082	147407083	chr7:147407083:A:G	rs73473284	A	G	A	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr7	147492823	147492824	chr7:147492824:G:T	rs1534553	G	T	T	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr7	147505761	147505762	chr7:147505762:A:C	rs10952688	A	C	A	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr7	147505783	147505784	chr7:147505784:G:A	rs11765290	G	A	A	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr7	147658390	147658391	chr7:147658391:C:T	rs78291755	C	T	T	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr7	147833356	147833357	chr7:147833357:A:T	rs12531111	A	T	T	Hoxd9.mouse_homeodomain_1	0	1	+	7.889898683853121	7.094471634580788	ACCATAAAA
chr7	147954398	147954399	chr7:147954399:G:T	rs2707587	G	T	T	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr7	147978171	147978172	chr7:147978172:G:A	rs2373285	G	A	G	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr7	148191821	148191822	chr7:148191822:C:T	rs1015931	C	T	.	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr7	148381394	148381395	chr7:148381395:C:T	rs35544280	C	T	C	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr7	148396434	148396435	chr7:148396435:A:C	rs73747623	A	C	A	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr7	148635434	148635435	chr7:148635435:A:G	rs10952769	A	G	A	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr7	148688632	148688633	chr7:148688633:T:C	rs10257756	T	C	T	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr7	148808367	148808368	chr7:148808368:G:C	rs734004	G	C	G	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr7	148846789	148846790	chr7:148846790:T:C	rs1023331095	T	C	T	Hoxd9.mouse_homeodomain_1	2	1	-	7.9772278588234515	5.2107920602579325	GCAATAAAA
chr7	149065232	149065233	chr7:149065233:T:A	rs553483342	T	A	T	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr7	149412499	149412500	chr7:149412500:A:G	rs150755432	A	G	A	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr7	149845448	149845449	chr7:149845449:A:G	rs563192182	A	G	A	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr7	150107099	150107100	chr7:150107100:C:G	rs2533591	C	G	G	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr7	150404676	150404677	chr7:150404677:G:A	rs117644257	G	A	G	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr7	150449204	150449205	chr7:150449205:A:G	rs7800693	A	G	A	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr7	150481338	150481339	chr7:150481339:T:C	rs10250123	T	C	T	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr7	150615560	150615561	chr7:150615561:C:G	rs1916028	C	G	G	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr7	150615566	150615567	chr7:150615567:C:T	chr7:150615567:C:T	C	T	C	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr7	150646215	150646216	chr7:150646216:G:A	rs6948827	G	A	A	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr7	150661247	150661248	chr7:150661248:T:C	rs1916016	T	C	T	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr7	150757096	150757097	chr7:150757097:T:C	rs36108479	T	C	T	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr7	150788286	150788287	chr7:150788287:G:A	rs56121033	G	A	G	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr7	151058217	151058218	chr7:151058218:C:T	rs2069441	C	T	C	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr7	151097638	151097639	chr7:151097639:G:C	rs6970547	G	C	c	Hoxd9.mouse_homeodomain_1	2	1	-	7.654940340027237	4.186948682574907	CCCGTAAAA
chr7	151229273	151229274	chr7:151229274:A:G	rs2792430	A	G	G	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr7	151315354	151315355	chr7:151315355:A:C	rs78019361	A	C	A	Hoxd9.mouse_homeodomain_1	4	1	-	8.099252595576761	1.2574341482461548	GCCATTAAA
chr7	151332515	151332516	chr7:151332516:G:A	rs189146776	G	A	G	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr7	151332517	151332518	chr7:151332518:T:C	rs34164796	T	C	T	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr7	151334420	151334421	chr7:151334421:A:G	rs7807594	A	G	A	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr7	151416056	151416057	chr7:151416057:T:C	rs34311452	T	C	T	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr7	151637844	151637845	chr7:151637845:G:A	rs151022060	G	A	-	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr7	151687839	151687840	chr7:151687840:C:G	rs73158159	C	G	-	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr7	151692808	151692809	chr7:151692809:T:A	rs6953809	T	A	-	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr7	151722854	151722855	chr7:151722855:T:C	rs1860743	T	C	-	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr7	152114463	152114464	chr7:152114464:G:A	rs35543978	G	A	G	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr7	152335983	152335984	chr7:152335984:A:C	rs74819138	A	C	A	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr7	152351445	152351446	chr7:152351446:C:T	rs191016652	C	T	C	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr7	152403796	152403797	chr7:152403797:T:C	rs75503466	T	C	T	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr7	152554073	152554074	chr7:152554074:G:A	rs62492149	G	A	G	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr7	152577407	152577408	chr7:152577408:G:A	rs10435212	G	A	G	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr7	152577411	152577412	chr7:152577412:C:T	rs111733970	C	T	C	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr7	152616159	152616160	chr7:152616160:A:G	rs73728819	A	G	A	Hoxd9.mouse_homeodomain_1	6	1	+	8.027213970992095	1.3233880244003648	CACATAAAA
chr7	152616172	152616173	chr7:152616173:T:C	rs73166413	T	C	T	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr7	152706950	152706951	chr7:152706951:T:C	rs1489774267	T	C	T	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr7	152707984	152707985	chr7:152707985:G:A	rs28528852	G	A	A	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr7	152733684	152733685	chr7:152733685:T:C	rs4601228	T	C	C	Hoxd9.mouse_homeodomain_1	3	1	-	7.45645131454733	6.122372714684838	CCCATAAAC
chr7	152860489	152860490	chr7:152860490:T:C	rs73490980	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.678783717710262	7.34470511784777	GCCATAAAA
chr7	153273393	153273394	chr7:153273394:A:T	rs1735081	A	T	T	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr7	153628630	153628631	chr7:153628631:G:A	rs36046851	G	A	.	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr7	153628636	153628637	chr7:153628637:G:A	rs142780559	G	A	.	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr7	153832170	153832171	chr7:153832171:T:C	rs2192276	T	C	C	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr7	154475597	154475598	chr7:154475598:T:A	rs10249186	T	A	T	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr7	154938109	154938110	chr7:154938110:C:T	rs4960650	C	T	C	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr7	155109633	155109634	chr7:155109634:T:A	rs56275408	T	A	T	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr7	155186230	155186231	chr7:155186231:C:A	rs7808464	C	A	N	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr7	155205321	155205322	chr7:155205322:G:A	rs58597826	G	A	G	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr7	155265367	155265368	chr7:155265368:G:A	rs34832168	G	A	G	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr7	155265376	155265377	chr7:155265377:G:A	rs112449431	G	A	G	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr7	155375953	155375954	chr7:155375954:C:T	rs7806270	C	T	C	Hoxd9.mouse_homeodomain_1	1	1	+	7.522691831404475	6.207889917071467	CCCATAAAG
chr7	155385528	155385529	chr7:155385529:C:T	rs147669228	C	T	c	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr7	155385534	155385535	chr7:155385535:G:A	rs13245215	G	A	G	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr7	155568336	155568337	chr7:155568337:C:T	rs73498114	C	T	C	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr7	155585675	155585676	chr7:155585676:G:A	rs28620130	G	A	T	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr7	155588884	155588885	chr7:155588885:A:G	rs9986809	A	G	G	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr7	155886534	155886535	chr7:155886535:C:T	rs74434236	C	T	C	Hoxd9.mouse_homeodomain_1	3	1	-	7.654940340027237	8.98901893988973	CCCGTAAAA
chr7	155889461	155889462	chr7:155889462:T:C	rs7780318	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.409487817756228	7.075409217893736	CCCATTAAA
chr7	155968418	155968419	chr7:155968419:T:C	rs6943723	T	C	C	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr7	155968422	155968423	chr7:155968423:G:A	rs2885942	G	A	A	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr7	156006354	156006355	chr7:156006355:A:G	rs56354640	A	G	A	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr7	156186225	156186226	chr7:156186226:G:A	rs62481575	G	A	G	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr7	156209027	156209028	chr7:156209028:A:T	rs1185790	A	T	T	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr7	156237564	156237565	chr7:156237565:T:C	rs13241755	T	C	T	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr7	156496497	156496498	chr7:156496498:C:T	rs73179057	C	T	C	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr7	156528248	156528249	chr7:156528249:G:C	rs73179073	G	C	G	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr7	156528249	156528250	chr7:156528250:A:T	rs73179074	A	T	A	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr7	157096263	157096264	chr7:157096264:G:A	rs533906290	G	A	G	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr7	157096286	157096287	chr7:157096287:G:A	rs11771048	G	A	G	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr7	157112248	157112249	chr7:157112249:G:A	rs6955655	G	A	A	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr7	157398716	157398717	chr7:157398717:A:G	rs1025542443	A	G	A	Hoxd9.mouse_homeodomain_1	5	1	+	8.287463081002919	1.9132733627563638	CCAATAAAA
chr7	157553496	157553497	chr7:157553497:G:A	rs221275	G	A	G	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr7	157719284	157719285	chr7:157719285:G:A	rs67547882	G	A	G	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr7	157746724	157746725	chr7:157746725:C:T	rs2907684	C	T	T	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr7	157801653	157801654	chr7:157801654:A:C	rs7803301	A	C	A	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr7	157842229	157842230	chr7:157842230:C:T	rs7777198	C	T	T	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr7	157943971	157943972	chr7:157943972:C:G	rs12698113	C	G	C	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr7	157982135	157982136	chr7:157982136:C:G	rs4716861	C	G	G	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr7	158086744	158086745	chr7:158086745:C:G	rs6960740	C	G	C	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr7	158234762	158234763	chr7:158234763:T:C	rs10227009	T	C	T	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr7	158253361	158253362	chr7:158253362:C:T	rs4909153	C	T	C	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr7	158273292	158273293	chr7:158273293:G:A	rs6952110	G	A	g	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr7	158370682	158370683	chr7:158370683:C:T	rs1349723	C	T	C	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr7	158404344	158404345	chr7:158404345:G:T	rs4909212	G	T	G	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr7	158486139	158486140	chr7:158486140:A:C	rs10272624	A	C	C	Hoxd9.mouse_homeodomain_1	4	1	-	8.287463081002919	1.445644633672313	CCAATAAAA
chr7	158601644	158601645	chr7:158601645:A:G	rs2141740	A	G	A	Hoxd9.mouse_homeodomain_1	5	1	+	8.98901893988973	2.6148292216431743	CCCATAAAA
chr7	158761025	158761026	chr7:158761026:G:C	rs12668655	G	C	G	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr7	158818392	158818393	chr7:158818393:C:T	rs946245	C	T	C	Hoxd9.mouse_homeodomain_1	3	1	-	7.34470511784777	8.678783717710262	GCCGTAAAA
chr7	158818410	158818411	chr7:158818411:G:A	rs113854923	G	A	G	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr7	158921427	158921428	chr7:158921428:G:A	rs3763419	G	A	G	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr7	158922572	158922573	chr7:158922573:A:G	rs6459913	A	G	G	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr7	159021120	159021121	chr7:159021121:A:G	rs2527182	A	G	A	Hoxd9.mouse_homeodomain_1	4	1	-	7.45645131454733	4.801404669684752	CCCATAAAC
chr7	159211024	159211025	chr7:159211025:T:C	rs420283	T	C	C	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr7	159220745	159220746	chr7:159220746:G:A	rs77694141	G	A	G	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr7	159233473	159233474	chr7:159233474:G:T	rs427076	G	T	G	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr8	233545	233546	chr8:233546:G:A	rs78978495	G	A	.	Hoxd9.mouse_homeodomain_1	2	1	-	8.099252595576761	1.6118121379531245	GCCATTAAA
chr8	364655	364656	chr8:364656:T:C	rs75405748	T	C	.	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr8	364682	364683	chr8:364683:A:G	rs6558695	A	G	.	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr8	395979	395980	chr8:395980:T:G	rs7016014	T	G	.	Hoxd9.mouse_homeodomain_1	8	1	-	8.678783717710262	7.1462160923678635	GCCATAAAA
chr8	457929	457930	chr8:457930:C:G	rs75449849	C	G	C	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr8	518675	518676	chr8:518676:A:G	rs73529929	A	G	A	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr8	625934	625935	chr8:625935:C:G	rs79693921	C	G	C	Hoxd9.mouse_homeodomain_1	1	1	+	7.34470511784777	0.9351718890654038	GCCGTAAAA
chr8	638931	638932	chr8:638932:G:T	rs62486207	G	T	G	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr8	640815	640816	chr8:640816:C:T	rs906891	C	T	T	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr8	694823	694824	chr8:694824:G:A	rs7012226	G	A	G	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr8	703744	703745	chr8:703745:T:C	rs10780176	T	C	C	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr8	843148	843149	chr8:843149:T:C	rs10105558	T	C	C	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr8	953656	953657	chr8:953657:T:A	rs527324543	T	A	T	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr8	1389178	1389179	chr8:1389179:C:T	rs4976882	C	T	C	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr8	1559680	1559681	chr8:1559681:C:T	rs3793421	C	T	C	Hoxd9.mouse_homeodomain_1	8	1	+	7.45645131454733	6.056505815123662	CCCATAAAC
chr8	1573737	1573738	chr8:1573738:T:C	rs12546852	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.287463081002919	6.953384481140425	CCAATAAAA
chr8	1633672	1633673	chr8:1633673:C:T	rs6980953	C	T	T	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr8	1705523	1705524	chr8:1705524:A:G	rs2957054	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	7.716978748812629	6.382900148950135	GACATAAAA
chr8	1928464	1928465	chr8:1928465:C:T	rs2272611	C	T	C	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr8	1949560	1949561	chr8:1949561:G:A	rs2280822	G	A	A	Hoxd9.mouse_homeodomain_1	0	1	-	7.091711387329735	5.197164082020794	CCCATCAAA
chr8	1978791	1978792	chr8:1978792:C:T	rs13271843	C	T	T	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr8	1981771	1981772	chr8:1981772:C:G	rs34997283	C	G	C	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr8	2005369	2005370	chr8:2005370:C:G	rs142465617	C	G	C	Hoxd9.mouse_homeodomain_1	0	1	+	8.027213970992095	7.716978748812629	CACATAAAA
chr8	2020052	2020053	chr8:2020053:A:G	rs73184766	A	G	A	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr8	2020975	2020976	chr8:2020976:A:G	rs9314445	A	G	A	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr8	2028777	2028778	chr8:2028778:T:C	rs28513965	T	C	T	Hoxd9.mouse_homeodomain_1	5	1	-	8.027213970992095	1.6530242527455408	CACATAAAA
chr8	2114071	2114072	chr8:2114072:G:C	rs73169411	G	C	C	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr8	2502301	2502302	chr8:2502302:C:T	rs73173416	C	T	c	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr8	2654516	2654517	chr8:2654517:T:C	rs73175153	T	C	T	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr8	2692111	2692112	chr8:2692112:C:T	rs73175181	C	T	T	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr8	2720878	2720879	chr8:2720879:T:C	rs986113316	T	C	T	Hoxd9.mouse_homeodomain_1	1	1	-	7.716978748812629	2.2692504889278973	GACATAAAA
chr8	2726586	2726587	chr8:2726587:G:A	rs182318042	G	A	G	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr8	2839920	2839921	chr8:2839921:G:A	rs116908315	G	A	A	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr8	2871960	2871961	chr8:2871961:A:T	rs2924913	A	T	T	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr8	2882576	2882577	chr8:2882577:A:G	rs2721278	A	G	a	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr8	2882604	2882605	chr8:2882605:T:C	rs2721277	T	C	t	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr8	2882606	2882607	chr8:2882607:A:G	rs2670084	A	G	a	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr8	3018251	3018252	chr8:3018252:A:T	rs78160512	A	T	A	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr8	3134444	3134445	chr8:3134445:G:A	rs115610642	G	A	G	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr8	3236682	3236683	chr8:3236683:C:A	rs73185532	C	A	C	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr8	3236818	3236819	chr8:3236819:G:T	rs59014653	G	T	G	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr8	3269399	3269400	chr8:3269400:G:T	rs13261870	G	T	G	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr8	3269430	3269431	chr8:3269431:C:T	rs13264018	C	T	C	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr8	3312163	3312164	chr8:3312164:C:G	rs1910377	C	G	G	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr8	3358713	3358714	chr8:3358714:G:A	rs9774310	G	A	A	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr8	3469260	3469261	chr8:3469261:C:G	rs12681193	C	G	G	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr8	3726862	3726863	chr8:3726863:A:T	rs10104175	A	T	A	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr8	3726900	3726901	chr8:3726901:A:G	rs2623749	A	G	G	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr8	3761274	3761275	chr8:3761275:C:A	rs10441641	C	A	C	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr8	3888155	3888156	chr8:3888156:T:C	rs4875792	T	C	T	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr8	3984296	3984297	chr8:3984297:T:C	rs2554727	T	C	C	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr8	3989352	3989353	chr8:3989353:T:A	rs76339179	T	A	T	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr8	4062289	4062290	chr8:4062290:T:A	rs1895889	T	A	t	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr8	4324776	4324777	chr8:4324777:G:A	rs189584503	G	A	G	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr8	5234554	5234555	chr8:5234555:T:C	rs7832770	T	C	T	Hoxd9.mouse_homeodomain_1	5	1	-	8.027213970992095	1.6530242527455408	CACATAAAA
chr8	5455977	5455978	chr8:5455978:G:T	rs7827464	G	T	G	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr8	5745752	5745753	chr8:5745753:T:C	rs17454451	T	C	T	Hoxd9.mouse_homeodomain_1	4	1	+	7.212456609225008	4.557409964362429	GCCATAAAG
chr8	5809041	5809042	chr8:5809042:C:T	rs10503334	C	T	T	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr8	6428718	6428719	chr8:6428719:G:A	rs142101611	G	A	G	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr8	6570282	6570283	chr8:6570283:G:A	rs2922842	G	A	A	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr8	6596191	6596192	chr8:6596192:G:A	rs7842634	G	A	G	Hoxd9.mouse_homeodomain_1	1	1	-	8.287463081002919	6.972661166669912	CCAATAAAA
chr8	6665277	6665278	chr8:6665278:A:T	rs2897942	A	T	A	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr8	6802016	6802017	chr8:6802017:A:C	rs12381538	A	C	A	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr8	6851401	6851402	chr8:6851402:A:C	rs2951865	A	C	C	Hoxd9.mouse_homeodomain_1	8	1	+	7.241935125048919	5.709367499706518	CCCATACAA
chr8	6859264	6859265	chr8:6859265:C:G	rs10095208	C	G	C	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr8	6943372	6943373	chr8:6943373:C:T	rs80053262	C	T	C	Hoxd9.mouse_homeodomain_1	3	1	-	7.075409217893736	8.409487817756228	CCCGTTAAA
chr8	6989855	6989856	chr8:6989856:A:T	rs2615795	A	T	.	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr8	6989878	6989879	chr8:6989879:G:A	rs79107522	G	A	.	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr8	7018710	7018711	chr8:7018711:C:T	rs140238848	C	T	.	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr8	8143464	8143465	chr8:8143465:C:A	rs777944873	C	A	.	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr8	8296670	8296671	chr8:8296671:G:A	rs149702214	G	A	G	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr8	8389702	8389703	chr8:8389703:T:C	rs2920998	T	C	C	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr8	8451497	8451498	chr8:8451498:T:C	rs2979162	T	C	T	Hoxd9.mouse_homeodomain_1	4	1	+	8.678783717710262	6.023737072847684	GCCATAAAA
chr8	8451503	8451504	chr8:8451504:A:G	rs2976866	A	G	A	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr8	8778004	8778005	chr8:8778005:T:C	rs500115	T	C	T	Hoxd9.mouse_homeodomain_1	4	1	+	8.027213970992095	5.372167326129518	CACATAAAA
chr8	8928569	8928570	chr8:8928570:A:G	rs1705172	A	G	A	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr8	9002641	9002642	chr8:9002642:A:G	rs116420975	A	G	A	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr8	9023513	9023514	chr8:9023514:C:G	rs73197706	C	G	C	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr8	9050792	9050793	chr8:9050793:G:A	rs4841090	G	A	G	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr8	9126582	9126583	chr8:9126583:G:A	rs7008494	G	A	G	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr8	9134938	9134939	chr8:9134939:T:C	rs542653882	T	C	T	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr8	9186473	9186474	chr8:9186474:C:T	rs11784786	C	T	T	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr8	9248117	9248118	chr8:9248118:T:A	rs17656706	T	A	T	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr8	9368361	9368362	chr8:9368362:A:C	rs10091799	A	C	A	Hoxd9.mouse_homeodomain_1	6	1	+	8.027213970992095	6.2801301561512854	CACATAAAA
chr8	9719585	9719586	chr8:9719586:C:T	rs6990116	C	T	-	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr8	10065943	10065944	chr8:10065944:C:T	rs185468389	C	T	C	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr8	10087959	10087960	chr8:10087960:T:C	rs4841277	T	C	T	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr8	10253783	10253784	chr8:10253784:G:A	rs6983870	G	A	G	Hoxd9.mouse_homeodomain_1	1	1	-	8.98901893988973	7.674217025556723	CCCATAAAA
chr8	10262198	10262199	chr8:10262199:T:G	rs4288377	T	G	T	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr8	10267833	10267834	chr8:10267834:A:T	rs78506064	A	T	A	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr8	10311072	10311073	chr8:10311073:C:T	rs11782293	C	T	C	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr8	10331958	10331959	chr8:10331959:G:A	rs66533014	G	A	G	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr8	10353282	10353283	chr8:10353283:A:G	rs7828605	A	G	A	Hoxd9.mouse_homeodomain_1	7	1	+	8.287463081002919	1.5836371344111884	CCAATAAAA
chr8	10507062	10507063	chr8:10507063:C:T	rs4496927	C	T	T	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr8	10628209	10628210	chr8:10628210:G:A	rs55874831	G	A	G	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr8	10648724	10648725	chr8:10648725:G:A	rs4841405	G	A	A	Hoxd9.mouse_homeodomain_1	2	1	-	8.027213970992095	1.5397735133684596	CACATAAAA
chr8	10722674	10722675	chr8:10722675:C:T	rs73662609	C	T	C	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr8	10917901	10917902	chr8:10917902:T:C	rs6601537	T	C	C	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr8	10917943	10917944	chr8:10917944:A:G	rs6601538	A	G	G	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr8	10938945	10938946	chr8:10938946:G:T	rs4077538	G	T	G	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr8	10938961	10938962	chr8:10938962:A:G	rs7005884	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.98901893988973	7.654940340027237	CCCATAAAA
chr8	10956393	10956394	chr8:10956394:G:T	rs10096381	G	T	T	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr8	10956433	10956434	chr8:10956434:C:G	rs73196859	C	G	C	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr8	10978513	10978514	chr8:10978514:T:C	rs6601544	T	C	C	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr8	11117570	11117571	chr8:11117571:T:A	rs28417109	T	A	A	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr8	11250733	11250734	chr8:11250734:T:G	rs920048	T	G	T	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr8	11335041	11335042	chr8:11335042:G:C	rs58283816	G	C	C	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr8	11402893	11402894	chr8:11402894:A:G	rs143455214	A	G	-	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr8	11422333	11422334	chr8:11422334:T:C	rs187659720	T	C	T	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr8	11514037	11514038	chr8:11514038:C:T	rs12674768	C	T	C	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr8	11533096	11533097	chr8:11533097:T:G	rs561096330	T	G	T	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr8	11533117	11533118	chr8:11533118:A:T	rs58373594	A	T	A	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr8	11545173	11545174	chr8:11545174:G:A	rs2245030	G	A	A	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr8	11567524	11567525	chr8:11567525:C:T	rs73197317	C	T	C	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr8	11567525	11567526	chr8:11567526:G:A	rs185681084	G	A	G	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr8	11630595	11630596	chr8:11630596:G:A	rs73201424	G	A	G	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr8	11630617	11630618	chr8:11630618:T:C	rs2409786	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.678783717710262	7.34470511784777	GCCATAAAA
chr8	11656223	11656224	chr8:11656224:T:G	rs729985	T	G	T	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr8	11723938	11723939	chr8:11723939:A:G	rs2409807	A	G	A	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr8	11753343	11753344	chr8:11753344:T:C	rs59431377	T	C	T	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr8	11765840	11765841	chr8:11765841:A:G	rs112471664	A	G	A	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr8	11795426	11795427	chr8:11795427:A:T	rs138381388	A	T	A	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr8	12566418	12566419	chr8:12566419:G:C	rs1027252358	G	C	.	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr8	12765403	12765404	chr8:12765404:A:G	rs55931840	A	G	A	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr8	12775049	12775050	chr8:12775050:G:A	rs531914981	G	A	G	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr8	12845943	12845944	chr8:12845944:A:G	rs34416944	A	G	A	Hoxd9.mouse_homeodomain_1	4	1	-	8.027213970992095	5.372167326129518	CACATAAAA
chr8	12857280	12857281	chr8:12857281:A:G	rs17770189	A	G	A	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr8	12857310	12857311	chr8:12857311:A:C	rs17832168	A	C	A	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr8	12896589	12896590	chr8:12896590:C:T	rs2948360	C	T	T	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr8	13001822	13001823	chr8:13001823:A:G	rs17116610	A	G	A	Hoxd9.mouse_homeodomain_1	4	1	-	8.98901893988973	6.333972295027152	CCCATAAAA
chr8	13093515	13093516	chr8:13093516:A:G	rs561681	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	7.45645131454733	6.122372714684838	CCCATAAAC
chr8	13279696	13279697	chr8:13279697:A:G	rs12542751	A	G	A	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr8	13297648	13297649	chr8:13297649:C:G	rs11782144	C	G	C	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr8	13414667	13414668	chr8:13414668:C:T	rs143300237	C	T	C	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr8	13428122	13428123	chr8:13428123:T:A	rs58306100	T	A	T	Hoxd9.mouse_homeodomain_1	7	1	-	7.241935125048919	5.494851310208107	CCCATACAA
chr8	13428128	13428129	chr8:13428129:G:A	rs57706723	G	A	G	Hoxd9.mouse_homeodomain_1	1	1	-	7.241935125048919	5.927133210715912	CCCATACAA
chr8	13505999	13506000	chr8:13506000:C:T	rs117511542	C	T	C	Hoxd9.mouse_homeodomain_1	1	1	+	7.091711387329735	5.776909472996728	CCCATCAAA
chr8	13546247	13546248	chr8:13546248:G:C	rs17094601	G	C	G	Hoxd9.mouse_homeodomain_1	1	1	-	7.889898683853121	1.480365455070757	ACCATAAAA
chr8	13569531	13569532	chr8:13569532:T:G	rs191303479	T	G	T	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr8	13629593	13629594	chr8:13629594:T:C	rs12547784	T	C	T	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr8	13691773	13691774	chr8:13691774:C:G	rs117702788	C	G	C	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr8	13705702	13705703	chr8:13705703:C:T	rs73221656	C	T	T	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr8	13705716	13705717	chr8:13705717:C:T	rs138525154	C	T	C	Hoxd9.mouse_homeodomain_1	2	1	+	8.027213970992095	1.5397735133684596	CACATAAAA
chr8	13740204	13740205	chr8:13740205:C:G	rs4574845	C	G	C	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr8	13895391	13895392	chr8:13895392:C:G	rs17117930	C	G	C	Hoxd9.mouse_homeodomain_1	2	1	+	8.027213970992095	4.559222313539767	CACATAAAA
chr8	14038220	14038221	chr8:14038221:A:G	rs1485543	A	G	A	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr8	14655652	14655653	chr8:14655653:T:C	rs73200885	T	C	T	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr8	14655686	14655687	chr8:14655687:A:G	rs58947477	A	G	A	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr8	14655932	14655933	chr8:14655933:T:C	rs11778242	T	C	T	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr8	14655959	14655960	chr8:14655960:C:A	rs6982610	C	A	A	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr8	14765632	14765633	chr8:14765633:T:C	rs7822116	T	C	T	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr8	15147605	15147606	chr8:15147606:G:C	rs268442	G	C	G	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr8	15687418	15687419	chr8:15687419:A:G	rs4590441	A	G	a	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr8	15812091	15812092	chr8:15812092:T:C	rs17675226	T	C	G	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr8	15862193	15862194	chr8:15862194:A:G	rs78985756	A	G	A	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr8	15862206	15862207	chr8:15862207:C:G	rs73204996	C	G	C	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr8	16017622	16017623	chr8:16017623:T:C	rs56337232	T	C	T	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr8	16184255	16184256	chr8:16184256:G:C	rs398095	G	C	G	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr8	16252196	16252197	chr8:16252197:T:C	rs138159101	T	C	T	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr8	16311259	16311260	chr8:16311260:A:G	rs7018305	A	G	A	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr8	16679299	16679300	chr8:16679300:A:G	rs934440	A	G	A	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr8	16998606	16998607	chr8:16998607:C:T	rs3850752	C	T	T	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr8	17026651	17026652	chr8:17026652:C:T	rs562655584	C	T	C	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr8	17053850	17053851	chr8:17053851:G:A	rs75301020	G	A	G	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr8	17053857	17053858	chr8:17053858:C:T	rs17586034	C	T	C	Hoxd9.mouse_homeodomain_1	1	1	+	8.98901893988973	7.674217025556723	CCCATAAAA
chr8	17137417	17137418	chr8:17137418:T:C	rs2517050	T	C	T	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr8	17310446	17310447	chr8:17310447:G:C	rs2106016	G	C	G	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr8	17347768	17347769	chr8:17347769:A:G	rs11997467	A	G	G	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr8	17424434	17424435	chr8:17424435:A:G	rs79246244	A	G	A	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr8	17529925	17529926	chr8:17529926:T:C	rs2517243	T	C	T	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr8	17540437	17540438	chr8:17540438:C:A	rs6983122	C	A	A	Hoxd9.mouse_homeodomain_1	1	1	+	8.98901893988973	8.027213970992095	CCCATAAAA
chr8	17670478	17670479	chr8:17670479:C:G	rs2410494	C	G	G	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr8	17700159	17700160	chr8:17700160:G:C	rs17125165	G	C	G	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr8	17721526	17721527	chr8:17721527:G:C	rs75913039	G	C	G	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr8	17803096	17803097	chr8:17803097:A:C	rs150510839	A	C	A	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr8	17837192	17837193	chr8:17837193:A:G	rs448705	A	G	A	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr8	17892690	17892691	chr8:17892691:T:C	rs10094922	T	C	T	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr8	17896363	17896364	chr8:17896364:C:T	rs3896063	C	T	C	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr8	17935574	17935575	chr8:17935575:A:G	rs916550	A	G	A	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr8	18097629	18097630	chr8:18097630:A:T	rs7015927	A	T	T	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr8	18209953	18209954	chr8:18209954:T:C	rs28359481	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.889898683853121	6.555820083990628	ACCATAAAA
chr8	18398365	18398366	chr8:18398366:C:T	rs1112005	C	T	C	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr8	18690896	18690897	chr8:18690897:T:G	rs1982801	T	G	T	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr8	18770907	18770908	chr8:18770908:A:T	rs11787013	A	T	A	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr8	18814231	18814232	chr8:18814232:T:C	rs2638659	T	C	T	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr8	18821194	18821195	chr8:18821195:T:G	rs1022758	T	G	T	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr8	19048321	19048322	chr8:19048322:T:C	rs558336229	T	C	T	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr8	19134931	19134932	chr8:19134932:A:G	rs932545104	A	G	A	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr8	19140672	19140673	chr8:19140673:G:A	rs56119430	G	A	G	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr8	19162689	19162690	chr8:19162690:C:T	rs691243	C	T	t	Hoxd9.mouse_homeodomain_1	2	1	+	8.98901893988973	2.5015784822660927	CCCATAAAA
chr8	19184129	19184130	chr8:19184130:G:T	rs28576774	G	T	G	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr8	19215025	19215026	chr8:19215026:G:A	rs12544391	G	A	G	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr8	19215033	19215034	chr8:19215034:A:G	rs1448092640	A	G	A	Hoxd9.mouse_homeodomain_1	5	1	+	7.34470511784777	0.970515399601214	GCCGTAAAA
chr8	19215045	19215046	chr8:19215046:T:C	rs17127984	T	C	T	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr8	19267902	19267903	chr8:19267903:T:C	rs2947260	T	C	T	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr8	19267911	19267912	chr8:19267912:C:T	rs76300054	C	T	C	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr8	19268100	19268101	chr8:19268101:C:G	rs558723753	C	G	C	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr8	19346891	19346892	chr8:19346892:C:T	rs150901552	C	T	C	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr8	19389384	19389385	chr8:19389385:C:A	rs35618425	C	A	A	Hoxd9.mouse_homeodomain_1	1	1	+	7.091711387329735	6.1299064184321015	CCCATCAAA
chr8	19501672	19501673	chr8:19501673:C:T	rs3923920	C	T	C	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr8	19544109	19544110	chr8:19544110:G:T	rs10283186	G	T	T	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr8	19612899	19612900	chr8:19612900:G:A	rs78608664	G	A	G	Hoxd9.mouse_homeodomain_1	3	1	+	7.654940340027237	8.98901893988973	CCCGTAAAA
chr8	19627065	19627066	chr8:19627066:G:A	rs1440851750	G	A	G	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr8	19727715	19727716	chr8:19727716:T:C	rs7831332	T	C	C	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr8	19865043	19865044	chr8:19865044:A:G	rs11204079	A	G	G	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr8	19865048	19865049	chr8:19865049:G:T	rs11998681	G	T	T	Hoxd9.mouse_homeodomain_1	0	1	+	8.678783717710262	7.094471634580788	GCCATAAAA
chr8	19898465	19898466	chr8:19898466:G:T	rs12543154	G	T	G	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr8	20005512	20005513	chr8:20005513:C:T	rs1441764	C	T	T	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr8	20145552	20145553	chr8:20145553:G:A	rs149808240	G	A	G	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr8	20164008	20164009	chr8:20164009:T:C	rs34355694	T	C	T	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr8	20170628	20170629	chr8:20170629:C:G	rs7011982	C	G	G	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr8	20274287	20274288	chr8:20274288:G:A	rs1532445	G	A	A	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr8	20701539	20701540	chr8:20701540:G:C	rs13280463	G	C	G	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr8	20726385	20726386	chr8:20726386:A:C	rs79521583	A	C	a	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr8	20851037	20851038	chr8:20851038:G:C	rs78844844	G	C	G	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr8	20953996	20953997	chr8:20953997:A:T	rs543295	A	T	T	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr8	21126815	21126816	chr8:21126816:G:A	rs35549782	G	A	G	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr8	21320869	21320870	chr8:21320870:G:A	rs116089573	G	A	G	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr8	21422116	21422117	chr8:21422117:C:A	rs10109743	C	A	C	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr8	21477370	21477371	chr8:21477371:T:C	rs13270412	T	C	T	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr8	21484325	21484326	chr8:21484326:C:T	rs1426193	C	T	T	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr8	21484355	21484356	chr8:21484356:C:T	rs76380202	C	T	C	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr8	21558902	21558903	chr8:21558903:T:C	rs77083099	T	C	t	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr8	21585998	21585999	chr8:21585999:T:G	rs9918798	T	G	g	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr8	21891365	21891366	chr8:21891366:C:G	rs28494556	C	G	c	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr8	21915254	21915255	chr8:21915255:G:T	chr8:21915255:G:T	G	T	G	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr8	22216117	22216118	chr8:22216118:A:C	rs7845248	A	C	A	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr8	22411415	22411416	chr8:22411416:T:A	rs11780055	T	A	T	Hoxd9.mouse_homeodomain_1	7	1	-	8.98901893988973	7.241935125048919	CCCATAAAA
chr8	22590301	22590302	chr8:22590302:T:A	rs73672767	T	A	C	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr8	22628420	22628421	chr8:22628421:G:C	rs10113779	G	C	G	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr8	22641887	22641888	chr8:22641888:C:A	rs17088513	C	A	A	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr8	22812417	22812418	chr8:22812418:T:C	rs73553871	T	C	T	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr8	22852149	22852150	chr8:22852150:T:C	rs1876875	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.287463081002919	6.953384481140425	CCAATAAAA
chr8	22985605	22985606	chr8:22985606:C:T	rs56896982	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	-	8.678783717710262	7.889898683853121	GCCATAAAA
chr8	23162140	23162141	chr8:23162141:T:C	rs7463799	T	C	T	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr8	23177987	23177988	chr8:23177988:C:T	rs117812298	C	T	t	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr8	23225457	23225458	chr8:23225458:G:T	rs13278062	G	T	G	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr8	23274203	23274204	chr8:23274204:T:A	rs62501149	T	A	T	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr8	23290924	23290925	chr8:23290925:A:G	rs143261064	A	G	A	Hoxd9.mouse_homeodomain_1	4	1	-	8.678783717710262	6.023737072847684	GCCATAAAA
chr8	23332734	23332735	chr8:23332735:C:T	rs62501392	C	T	-	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr8	23452618	23452619	chr8:23452619:C:T	rs543418073	C	T	C	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr8	23452619	23452620	chr8:23452620:G:A	rs10111621	G	A	G	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr8	23549801	23549802	chr8:23549802:A:G	rs67632614	A	G	G	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr8	23559620	23559621	chr8:23559621:T:C	rs1964070	T	C	T	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr8	23672007	23672008	chr8:23672008:G:A	rs1160267	G	A	G	Hoxd9.mouse_homeodomain_1	6	1	-	7.241935125048919	6.099603169859144	CCCATACAA
chr8	23833004	23833005	chr8:23833005:G:C	rs4872195	G	C	G	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr8	23850655	23850656	chr8:23850656:G:A	rs77260821	G	A	G	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr8	23850671	23850672	chr8:23850672:C:T	rs118170086	C	T	C	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr8	23991960	23991961	chr8:23991961:G:A	rs10099763	G	A	G	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr8	24194839	24194840	chr8:24194840:A:G	rs4872214	A	G	g	Hoxd9.mouse_homeodomain_1	3	1	+	8.409487817756228	7.075409217893736	CCCATTAAA
chr8	24344837	24344838	chr8:24344838:G:T	rs79219104	G	T	T	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr8	24422099	24422100	chr8:24422100:T:A	rs11991387	T	A	T	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr8	24530487	24530488	chr8:24530488:C:T	rs6557750	C	T	C	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr8	24573598	24573599	chr8:24573599:G:A	rs78883432	G	A	G	Hoxd9.mouse_homeodomain_1	0	1	+	7.9772278588234515	7.188342824966311	GCAATAAAA
chr8	24717232	24717233	chr8:24717233:T:G	rs73220304	T	G	T	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr8	25299085	25299086	chr8:25299086:A:G	rs17053341	A	G	A	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr8	25321767	25321768	chr8:25321768:T:C	rs2666175	T	C	C	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr8	25393108	25393109	chr8:25393109:T:C	rs147924957	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.716978748812629	6.382900148950135	GACATAAAA
chr8	26038893	26038894	chr8:26038894:C:T	rs17054793	C	T	C	Hoxd9.mouse_homeodomain_1	2	1	+	7.654940340027237	1.1674998824035994	CCCGTAAAA
chr8	26080721	26080722	chr8:26080722:T:G	rs13269936	T	G	T	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr8	26083088	26083089	chr8:26083089:C:T	rs11780628	C	T	C	Hoxd9.mouse_homeodomain_1	2	1	+	7.889898683853121	1.4024582262294842	ACCATAAAA
chr8	26186179	26186180	chr8:26186180:T:C	rs111417100	T	C	T	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr8	26244070	26244071	chr8:26244071:A:T	rs140207965	A	T	a	Hoxd9.mouse_homeodomain_1	7	1	+	7.1462160923678635	5.399132277527052	GCCATAAAC
chr8	26304847	26304848	chr8:26304848:A:G	rs11135933	A	G	G	Hoxd9.mouse_homeodomain_1	8	1	+	7.716978748812629	6.250651640327374	GACATAAAA
chr8	26367853	26367854	chr8:26367854:C:T	rs56128468	C	T	C	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr8	26470975	26470976	chr8:26470976:T:G	rs328077	T	G	g	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr8	26475729	26475730	chr8:26475730:G:A	rs2082596	G	A	G	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr8	26488176	26488177	chr8:26488177:A:G	rs66493712	A	G	A	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr8	26577934	26577935	chr8:26577935:C:T	rs114900295	C	T	C	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr8	26577945	26577946	chr8:26577946:T:C	rs940911246	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.9772278588234515	6.643149258960959	GCAATAAAA
chr8	26625312	26625313	chr8:26625313:A:C	rs1561818	A	C	C	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr8	26752500	26752501	chr8:26752501:G:A	rs62492165	G	A	G	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr8	26840650	26840651	chr8:26840651:T:A	rs495495	T	A	A	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr8	27043881	27043882	chr8:27043882:C:T	rs4545107	C	T	c	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr8	27043908	27043909	chr8:27043909:G:A	rs7459991	G	A	g	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr8	27201221	27201222	chr8:27201222:T:C	rs73239417	T	C	T	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr8	27249841	27249842	chr8:27249842:G:T	rs17367059	G	T	G	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr8	27257441	27257442	chr8:27257442:C:A	rs73239486	C	A	C	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr8	27332980	27332981	chr8:27332981:T:C	rs57621320	T	C	t	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr8	27356662	27356663	chr8:27356663:A:G	rs114946623	A	G	A	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr8	27406727	27406728	chr8:27406728:C:A	rs3779633	C	A	C	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr8	27559008	27559009	chr8:27559009:C:A	rs78336300	C	A	C	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr8	27609874	27609875	chr8:27609875:G:C	rs867231	G	C	G	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr8	27702224	27702225	chr8:27702225:C:T	rs117974096	C	T	C	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr8	27786670	27786671	chr8:27786671:T:C	rs150017343	T	C	T	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr8	27982021	27982022	chr8:27982022:T:A	rs13250832	T	A	A	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr8	28093507	28093508	chr8:28093508:G:A	rs11786004	G	A	G	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr8	28203172	28203173	chr8:28203173:A:G	rs7821358	A	G	a	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr8	28203183	28203184	chr8:28203184:G:A	rs149612454	G	A	g	Hoxd9.mouse_homeodomain_1	0	1	+	7.212456609225008	6.423571575367866	GCCATAAAG
chr8	28203211	28203212	chr8:28203212:T:C	rs7828675	T	C	c	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr8	28428824	28428825	chr8:28428825:G:A	rs2270654	G	A	A	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr8	28498189	28498190	chr8:28498190:G:A	rs11775139	G	A	G	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr8	28588443	28588444	chr8:28588444:A:G	rs60168573	A	G	G	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr8	28595836	28595837	chr8:28595837:C:T	rs10110318	C	T	C	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr8	28647382	28647383	chr8:28647383:G:A	rs352414	G	A	G	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr8	28835407	28835408	chr8:28835408:C:A	rs116547778	C	A	C	Hoxd9.mouse_homeodomain_1	0	1	+	8.409487817756228	7.3103675617196195	CCCATTAAA
chr8	29296558	29296559	chr8:29296559:A:G	rs571685	A	G	A	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr8	29348758	29348759	chr8:29348759:G:T	chr8:29348759:G:T	G	T	G	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr8	29348761	29348762	chr8:29348762:G:C	rs1455916	G	C	G	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr8	29377979	29377980	chr8:29377980:G:A	rs2637822	G	A	A	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr8	29404068	29404069	chr8:29404069:A:C	rs60111794	A	C	A	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr8	29512748	29512749	chr8:29512749:G:C	rs112064583	G	C	G	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr8	29783945	29783946	chr8:29783946:A:C	rs28490372	A	C	A	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr8	29825549	29825550	chr8:29825550:C:T	rs11782220	C	T	C	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr8	29829404	29829405	chr8:29829405:G:A	rs13255271	G	A	G	Hoxd9.mouse_homeodomain_1	1	1	-	8.98901893988973	7.674217025556723	CCCATAAAA
chr8	29895592	29895593	chr8:29895593:A:T	rs7835709	A	T	A	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr8	30005457	30005458	chr8:30005458:C:T	rs12678250	C	T	C	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr8	30015878	30015879	chr8:30015879:G:C	rs309851	G	C	G	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr8	30113459	30113460	chr8:30113460:A:C	rs188046488	A	C	A	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr8	30202787	30202788	chr8:30202788:C:T	rs7830778	C	T	C	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr8	30235985	30235986	chr8:30235986:T:C	rs73583508	T	C	t	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr8	30440338	30440339	chr8:30440339:G:A	rs146658794	G	A	G	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr8	30446316	30446317	chr8:30446317:A:C	rs4416792	A	C	A	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr8	30722235	30722236	chr8:30722236:C:T	rs2472219	C	T	C	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr8	30745268	30745269	chr8:30745269:G:A	chr8:30745269:G:A	G	A	G	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr8	31199580	31199581	chr8:31199581:A:C	rs2553239	A	C	A	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr8	32108982	32108983	chr8:32108983:A:G	rs12680514	A	G	A	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr8	32240202	32240203	chr8:32240203:T:C	rs76038144	T	C	t	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr8	32323092	32323093	chr8:32323093:A:C	rs10090851	A	C	C	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr8	32534601	32534602	chr8:32534602:T:C	chr8:32534602:T:C	T	C	T	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr8	32767309	32767310	chr8:32767310:A:G	rs3735781	A	G	A	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr8	32767338	32767339	chr8:32767339:C:A	rs3735782	C	A	C	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr8	32779174	32779175	chr8:32779175:T:C	rs9656743	T	C	C	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr8	33514026	33514027	chr8:33514027:A:T	rs2083494	A	T	T	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr8	33514033	33514034	chr8:33514034:T:A	rs3098658	T	A	T	Hoxd9.mouse_homeodomain_1	6	1	-	8.099252595576761	5.209836825546175	GCCATTAAA
chr8	33514036	33514037	chr8:33514037:T:C	rs182145165	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.099252595576761	6.765173995714267	GCCATTAAA
chr8	34204711	34204712	chr8:34204712:T:C	rs13282491	T	C	T	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr8	34692716	34692717	chr8:34692717:C:T	rs13261872	C	T	T	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr8	34781658	34781659	chr8:34781659:G:C	rs2687554	G	C	C	Hoxd9.mouse_homeodomain_1	0	1	+	7.212456609225008	7.522691831404475	GCCATAAAG
chr8	34984418	34984419	chr8:34984419:T:C	rs116452370	T	C	T	Hoxd9.mouse_homeodomain_1	5	1	-	7.522691831404475	1.1485021131579192	CCCATAAAG
chr8	35120120	35120121	chr8:35120121:C:A	rs2218870	C	A	C	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr8	36414827	36414828	chr8:36414828:A:G	rs2843871	A	G	a	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr8	36588890	36588891	chr8:36588891:G:A	rs17303597	G	A	G	Hoxd9.mouse_homeodomain_1	3	1	+	7.34470511784777	8.678783717710262	GCCGTAAAA
chr8	36859344	36859345	chr8:36859345:T:A	rs2067886	T	A	T	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr8	36887658	36887659	chr8:36887659:T:G	rs987335764	T	G	T	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr8	37225049	37225050	chr8:37225050:G:A	rs473731	G	A	G	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr8	37243074	37243075	chr8:37243075:G:A	rs41506348	G	A	G	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr8	37267815	37267816	chr8:37267816:G:A	rs546453441	G	A	G	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr8	37298349	37298350	chr8:37298350:T:C	rs12547201	T	C	T	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr8	37303824	37303825	chr8:37303825:A:G	rs6985446	A	G	G	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr8	37361133	37361134	chr8:37361134:T:C	rs3843018	T	C	T	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr8	37452525	37452526	chr8:37452526:A:G	rs78932743	A	G	A	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr8	37540390	37540391	chr8:37540391:G:T	rs865784997	G	T	G	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr8	37561811	37561812	chr8:37561812:C:T	rs1022328929	C	T	C	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr8	37625244	37625245	chr8:37625245:A:G	rs6468431	A	G	A	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr8	37638167	37638168	chr8:37638168:G:A	rs149047481	G	A	G	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr8	37781116	37781117	chr8:37781117:A:G	rs182302997	A	G	A	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr8	37860949	37860950	chr8:37860950:C:T	rs1054748	C	T	T	Hoxd9.mouse_homeodomain_1	0	1	+	8.027213970992095	6.132666665683155	CACATAAAA
chr8	37914026	37914027	chr8:37914027:T:G	rs55717729	T	G	T	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr8	38106021	38106022	chr8:38106022:A:G	rs964874374	A	G	A	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr8	38118849	38118850	chr8:38118850:T:C	rs2843743	T	C	T	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr8	38442697	38442698	chr8:38442698:C:G	rs187705965	C	G	C	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr8	38551484	38551485	chr8:38551485:C:T	rs77218478	C	T	C	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr8	38611181	38611182	chr8:38611182:G:A	rs7016921	G	A	G	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr8	38707963	38707964	chr8:38707964:G:A	rs10481323	G	A	A	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr8	38717243	38717244	chr8:38717244:G:A	rs35923293	G	A	G	Hoxd9.mouse_homeodomain_1	5	1	-	7.091711387329735	8.409487817756228	CCCATCAAA
chr8	38730012	38730013	chr8:38730013:C:T	rs71517728	C	T	C	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr8	38957559	38957560	chr8:38957560:A:G	chr8:38957560:A:G	A	G	A	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr8	39346988	39346989	chr8:39346989:A:G	rs4529431	A	G	G	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr8	39533296	39533297	chr8:39533297:C:T	rs67882526	C	T	.	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr8	39582306	39582307	chr8:39582307:A:G	rs10108138	A	G	G	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr8	40211036	40211037	chr8:40211037:A:G	rs2980804	A	G	A	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr8	40336209	40336210	chr8:40336210:A:G	rs74586447	A	G	A	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr8	40459298	40459299	chr8:40459299:G:A	rs2565143	G	A	G	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr8	40485619	40485620	chr8:40485620:G:T	rs116547530	G	T	G	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr8	40592159	40592160	chr8:40592160:G:A	rs77150564	G	A	G	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr8	40602216	40602217	chr8:40602217:T:C	rs1031384	T	C	T	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr8	40715367	40715368	chr8:40715368:A:G	rs9643879	A	G	G	Hoxd9.mouse_homeodomain_1	6	1	+	7.212456609225008	0.5086306626332764	GCCATAAAG
chr8	40977900	40977901	chr8:40977901:A:G	rs1355591	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	7.889898683853121	6.555820083990628	ACCATAAAA
chr8	40990477	40990478	chr8:40990478:T:C	rs34106030	T	C	T	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr8	41064323	41064324	chr8:41064324:C:A	rs112170242	C	A	-	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr8	41152827	41152828	chr8:41152828:G:T	rs979325747	G	T	G	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr8	41190592	41190593	chr8:41190593:G:A	rs56737455	G	A	G	Hoxd9.mouse_homeodomain_1	1	1	-	7.522691831404475	6.207889917071467	CCCATAAAG
chr8	41190601	41190602	chr8:41190602:G:A	rs79338458	G	A	G	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr8	41190602	41190603	chr8:41190603:G:C	rs142168781	G	C	G	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr8	41644042	41644043	chr8:41644043:T:C	rs13254454	T	C	T	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr8	41735790	41735791	chr8:41735791:G:A	rs17603828	G	A	G	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr8	41773962	41773963	chr8:41773963:A:C	rs9785172	A	C	A	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr8	41888573	41888574	chr8:41888574:C:T	rs10504046	C	T	C	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr8	42052725	42052726	chr8:42052726:G:C	rs7002975	G	C	C	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr8	42104795	42104796	chr8:42104796:A:T	rs59462321	A	T	A	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr8	42549593	42549594	chr8:42549594:G:A	rs13250124	G	A	G	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr8	42720687	42720688	chr8:42720688:C:G	rs143859308	C	G	C	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr8	43239926	43239927	chr8:43239927:C:T	rs144831239	C	T	-	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr8	43933657	43933658	chr8:43933658:A:G	rs12545484	A	G	.	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr8	46072445	46072446	chr8:46072446:G:A	rs146819710	G	A	.	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr8	46343648	46343649	chr8:46343649:A:C	rs9987207	A	C	.	Hoxd9.mouse_homeodomain_1	8	1	+	8.98901893988973	7.45645131454733	CCCATAAAA
chr8	46437621	46437622	chr8:46437622:T:C	rs11136184	T	C	.	Hoxd9.mouse_homeodomain_1	3	1	-	7.522691831404475	6.188613231541982	CCCATAAAG
chr8	46918019	46918020	chr8:46918020:G:A	rs6998110	G	A	G	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr8	47218344	47218345	chr8:47218345:A:G	rs117970557	A	G	A	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr8	47218360	47218361	chr8:47218361:A:C	rs28971361	A	C	C	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr8	47514677	47514678	chr8:47514678:T:C	rs72646348	T	C	T	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr8	47540232	47540233	chr8:47540233:G:A	rs62539108	G	A	G	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr8	48258397	48258398	chr8:48258398:A:G	rs4552930	A	G	G	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr8	48422870	48422871	chr8:48422871:G:A	rs11989167	G	A	A	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr8	48428181	48428182	chr8:48428182:A:C	rs988493230	A	C	A	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr8	48641940	48641941	chr8:48641941:A:G	rs17631362	A	G	A	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr8	48979308	48979309	chr8:48979309:A:G	rs10109165	A	G	A	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr8	49227207	49227208	chr8:49227208:C:G	rs7007288	C	G	G	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr8	49379404	49379405	chr8:49379405:C:T	rs7001235	C	T	C	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr8	49843589	49843590	chr8:49843590:C:A	rs60631955	C	A	C	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr8	49980923	49980924	chr8:49980924:G:T	rs2129167	G	T	G	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr8	50213032	50213033	chr8:50213033:A:G	rs1450130	A	G	A	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr8	50213053	50213054	chr8:50213054:A:G	rs112858380	A	G	A	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr8	51115704	51115705	chr8:51115705:C:T	rs7841651	C	T	C	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr8	51660795	51660796	chr8:51660796:A:G	rs16916673	A	G	G	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr8	51869992	51869993	chr8:51869993:C:G	rs7011046	C	G	C	Hoxd9.mouse_homeodomain_1	0	1	+	7.241935125048919	6.931699902869452	CCCATACAA
chr8	52146881	52146882	chr8:52146882:C:T	rs78815764	C	T	C	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr8	52424372	52424373	chr8:52424373:G:A	rs34006528	G	A	G	Hoxd9.mouse_homeodomain_1	0	1	+	8.099252595576761	7.3103675617196195	GCCATTAAA
chr8	52484247	52484248	chr8:52484248:G:C	rs16919892	G	C	G	Hoxd9.mouse_homeodomain_1	0	1	-	8.287463081002919	7.9772278588234515	CCAATAAAA
chr8	52577625	52577626	chr8:52577626:G:C	rs4416838	G	C	G	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr8	52691884	52691885	chr8:52691885:T:A	rs117499094	T	A	T	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr8	53031821	53031822	chr8:53031822:G:A	rs9298485	G	A	G	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr8	53327921	53327922	chr8:53327922:C:G	rs7011197	C	G	G	Hoxd9.mouse_homeodomain_1	3	1	-	7.075409217893736	1.833979713552747	CCCGTTAAA
chr8	53484959	53484960	chr8:53484960:T:C	rs72653401	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.45645131454733	6.122372714684838	CCCATAAAC
chr8	53554022	53554023	chr8:53554023:T:C	rs11987218	T	C	t	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr8	53665483	53665484	chr8:53665484:A:G	rs10958390	A	G	A	Hoxd9.mouse_homeodomain_1	5	1	+	7.889898683853121	1.5157089656065659	ACCATAAAA
chr8	53666596	53666597	chr8:53666597:T:C	rs6980711	T	C	C	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr8	53666617	53666618	chr8:53666618:A:C	rs7014660	A	C	C	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr8	53721420	53721421	chr8:53721421:G:C	rs16919507	G	C	C	Hoxd9.mouse_homeodomain_1	2	1	-	7.716978748812629	4.248987091360299	GACATAAAA
chr8	53931052	53931053	chr8:53931053:C:G	rs2128821	C	G	C	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr8	54508371	54508372	chr8:54508372:A:T	rs112294296	A	T	A	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr8	54573094	54573095	chr8:54573095:A:T	rs11787436	A	T	A	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr8	54608338	54608339	chr8:54608339:G:A	rs2375549	G	A	g	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr8	54686194	54686195	chr8:54686195:G:A	rs395862	G	A	G	Hoxd9.mouse_homeodomain_1	2	1	-	8.027213970992095	1.5397735133684596	CACATAAAA
chr8	54897171	54897172	chr8:54897172:G:A	rs73589685	G	A	G	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr8	54908044	54908045	chr8:54908045:G:A	rs6473956	G	A	A	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr8	55284673	55284674	chr8:55284674:A:G	rs184443485	A	G	A	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr8	56174596	56174597	chr8:56174597:G:C	rs115834259	G	C	G	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr8	56185690	56185691	chr8:56185691:G:A	rs36077344	G	A	G	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr8	56454291	56454292	chr8:56454292:T:G	rs28622985	T	G	T	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr8	56454302	56454303	chr8:56454303:A:G	rs34079032	A	G	A	Hoxd9.mouse_homeodomain_1	8	1	+	8.678783717710262	7.212456609225008	GCCATAAAA
chr8	56821020	56821021	chr8:56821021:C:T	chr8:56821021:C:T	C	T	C	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr8	56844264	56844265	chr8:56844265:G:A	rs954264	G	A	G	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr8	56844298	56844299	chr8:56844299:C:G	rs954266	C	G	C	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr8	57165074	57165075	chr8:57165075:A:G	rs2029841	A	G	g	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr8	57212230	57212231	chr8:57212231:C:G	rs74645505	C	G	C	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr8	57395692	57395693	chr8:57395693:C:A	rs77697570	C	A	A	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr8	57395706	57395707	chr8:57395707:C:T	rs115126002	C	T	T	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr8	57537919	57537920	chr8:57537920:A:G	rs76551793	A	G	A	Hoxd9.mouse_homeodomain_1	5	1	+	7.241935125048919	0.867745406802363	CCCATACAA
chr8	58322298	58322299	chr8:58322299:T:A	rs944771414	T	A	T	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr8	58386037	58386038	chr8:58386038:A:G	rs75867765	A	G	A	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr8	58413035	58413036	chr8:58413036:C:G	rs13263105	C	G	G	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr8	58660029	58660030	chr8:58660030:C:G	rs139813149	C	G	C	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr8	58660032	58660033	chr8:58660033:G:T	rs1423160203	G	T	G	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr8	58805327	58805328	chr8:58805328:C:T	rs115453998	C	T	c	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr8	58830577	58830578	chr8:58830578:T:C	rs74891379	T	C	T	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr8	59145656	59145657	chr8:59145657:C:A	rs74795559	C	A	C	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr8	59319897	59319898	chr8:59319898:T:C	rs72653682	T	C	T	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr8	59625613	59625614	chr8:59625614:G:T	rs80194225	G	T	G	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr8	60137455	60137456	chr8:60137456:T:C	rs11781466	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.091711387329735	5.757632787467242	CCCATCAAA
chr8	60280730	60280731	chr8:60280731:A:G	rs115668655	A	G	A	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr8	60709088	60709089	chr8:60709089:G:C	rs755523590	G	C	G	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr8	60839320	60839321	chr8:60839321:C:A	rs4387010	C	A	a	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr8	60867511	60867512	chr8:60867512:A:G	rs10100774	A	G	A	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr8	60913410	60913411	chr8:60913411:C:T	rs73260575	C	T	C	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr8	60951522	60951523	chr8:60951523:A:C	rs6991886	A	C	C	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr8	61065471	61065472	chr8:61065472:C:T	rs4738860	C	T	T	Hoxd9.mouse_homeodomain_1	2	1	+	8.027213970992095	1.5397735133684596	CACATAAAA
chr8	61528464	61528465	chr8:61528465:A:T	rs16927460	A	T	A	Hoxd9.mouse_homeodomain_1	1	1	+	8.027213970992095	7.674217025556723	CACATAAAA
chr8	61563666	61563667	chr8:61563667:G:A	rs10096503	G	A	G	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr8	62506354	62506355	chr8:62506355:C:T	rs75394382	C	T	C	Hoxd9.mouse_homeodomain_1	2	1	+	7.654940340027237	1.1674998824035994	CCCGTAAAA
chr8	62876236	62876237	chr8:62876237:G:A	rs13253399	G	A	G	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr8	63086460	63086461	chr8:63086461:G:A	rs73684515	G	A	G	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr8	63089376	63089377	chr8:63089377:C:A	rs6472073	C	A	A	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr8	63195288	63195289	chr8:63195289:T:G	rs2043525	T	G	A	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr8	63297707	63297708	chr8:63297708:A:G	rs7465271	A	G	G	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr8	63428597	63428598	chr8:63428598:T:G	rs10435608	T	G	G	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr8	64009428	64009429	chr8:64009429:C:T	rs66830107	C	T	C	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr8	64372695	64372696	chr8:64372696:A:G	rs183005031	A	G	A	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr8	64580401	64580402	chr8:64580402:T:A	rs768488777	T	A	t	Hoxd9.mouse_homeodomain_1	3	1	-	7.091711387329735	5.08823025052109	CCCATCAAA
chr8	64888010	64888011	chr8:64888011:A:C	rs7829838	A	C	A	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr8	64998298	64998299	chr8:64998299:C:T	rs16931613	C	T	C	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr8	65012912	65012913	chr8:65012913:G:A	rs16931656	G	A	G	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr8	65128227	65128228	chr8:65128228:C:T	rs13255324	C	T	C	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr8	65395547	65395548	chr8:65395548:T:G	rs9643392	T	G	T	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr8	65540189	65540190	chr8:65540190:A:T	rs35859859	A	T	A	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr8	65844973	65844974	chr8:65844974:C:T	rs11779350	C	T	C	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr8	65899320	65899321	chr8:65899321:G:A	rs55801844	G	A	G	Hoxd9.mouse_homeodomain_1	0	1	-	8.027213970992095	6.132666665683155	CACATAAAA
chr8	65948375	65948376	chr8:65948376:C:T	chr8:65948376:C:T	C	T	C	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr8	65948801	65948802	chr8:65948802:C:A	rs59658032	C	A	C	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr8	65948803	65948804	chr8:65948804:G:T	rs143689573	G	T	G	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr8	65951902	65951903	chr8:65951903:A:G	rs56389721	A	G	G	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr8	66156426	66156427	chr8:66156427:T:G	rs10104916	T	G	G	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr8	66609783	66609784	chr8:66609784:C:T	rs139118280	C	T	C	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr8	66892580	66892581	chr8:66892581:G:C	rs114429691	G	C	G	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr8	66955542	66955543	chr8:66955543:T:C	rs11992605	T	C	C	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr8	67344632	67344633	chr8:67344633:T:C	rs140049927	T	C	T	Hoxd9.mouse_homeodomain_1	4	1	+	7.889898683853121	5.234852038990543	ACCATAAAA
chr8	67344652	67344653	chr8:67344653:A:T	rs718348	A	T	T	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr8	68079460	68079461	chr8:68079461:A:G	rs6994956	A	G	A	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr8	68112560	68112561	chr8:68112561:G:A	rs1434760	G	A	G	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr8	68112566	68112567	chr8:68112567:C:A	rs72660902	C	A	c	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr8	68285904	68285905	chr8:68285905:T:C	rs7843622	T	C	T	Hoxd9.mouse_homeodomain_1	5	1	-	8.98901893988973	2.6148292216431743	CCCATAAAA
chr8	68356234	68356235	chr8:68356235:T:G	rs814441	T	G	T	Hoxd9.mouse_homeodomain_1	6	1	-	7.45645131454733	5.709367499706518	CCCATAAAC
chr8	68391686	68391687	chr8:68391687:C:T	rs2676656	C	T	C	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr8	68632648	68632649	chr8:68632649:A:G	rs3857960	A	G	A	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr8	68671434	68671435	chr8:68671435:G:A	rs11781537	G	A	G	Hoxd9.mouse_homeodomain_1	2	1	-	8.099252595576761	1.6118121379531245	GCCATTAAA
chr8	68693677	68693678	chr8:68693678:G:A	rs6992870	G	A	A	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr8	68777047	68777048	chr8:68777048:C:G	rs12056660	C	G	C	Hoxd9.mouse_homeodomain_1	2	1	+	8.98901893988973	5.5210272824374	CCCATAAAA
chr8	68854990	68854991	chr8:68854991:A:G	rs927118511	A	G	A	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr8	68862390	68862391	chr8:68862391:C:T	rs7815119	C	T	C	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr8	68924200	68924201	chr8:68924201:A:G	rs75154269	A	G	A	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr8	69098909	69098910	chr8:69098910:T:A	rs674661	T	A	T	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr8	69104851	69104852	chr8:69104852:A:G	rs13273748	A	G	A	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr8	69108290	69108291	chr8:69108291:A:G	rs10090360	A	G	G	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr8	69369284	69369285	chr8:69369285:G:A	rs7814551	G	A	G	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr8	69532016	69532017	chr8:69532017:G:C	rs79540743	G	C	G	Hoxd9.mouse_homeodomain_1	1	1	-	7.091711387329735	0.6821781585473693	CCCATCAAA
chr8	69764176	69764177	chr8:69764177:T:A	rs35617319	T	A	A	Hoxd9.mouse_homeodomain_1	3	1	-	8.678783717710262	6.675302580901619	GCCATAAAA
chr8	69835873	69835874	chr8:69835874:C:G	rs13276735	C	G	a	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr8	69977852	69977853	chr8:69977853:G:A	rs17672399	G	A	G	Hoxd9.mouse_homeodomain_1	0	1	+	7.212456609225008	6.423571575367866	GCCATAAAG
chr8	70011743	70011744	chr8:70011744:A:G	rs114053386	A	G	A	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr8	70034357	70034358	chr8:70034358:C:T	rs10504463	C	T	C	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr8	70099721	70099722	chr8:70099722:T:C	rs3892266	T	C	C	Hoxd9.mouse_homeodomain_1	5	1	-	7.889898683853121	1.5157089656065659	ACCATAAAA
chr8	70454696	70454697	chr8:70454697:A:G	rs62530515	A	G	A	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr8	70663287	70663288	chr8:70663288:A:C	rs62531758	A	C	A	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr8	70670355	70670356	chr8:70670356:A:C	rs11991560	A	C	A	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr8	71035801	71035802	chr8:71035802:A:G	rs79381712	A	G	A	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr8	71301054	71301055	chr8:71301055:T:G	rs10092844	T	G	T	Hoxd9.mouse_homeodomain_1	7	1	-	7.34470511784777	4.4552893478171836	GCCGTAAAA
chr8	71302886	71302887	chr8:71302887:T:C	rs4738126	T	C	C	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr8	71605211	71605212	chr8:71605212:C:T	rs34345144	C	T	T	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr8	71667306	71667307	chr8:71667307:A:G	rs62518633	A	G	A	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr8	71740831	71740832	chr8:71740832:T:C	rs9657037	T	C	C	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr8	71800137	71800138	chr8:71800138:T:C	rs6998291	T	C	C	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr8	71810908	71810909	chr8:71810909:G:T	rs368931233	G	T	G	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr8	71980472	71980473	chr8:71980473:T:C	rs4737335	T	C	T	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr8	72009306	72009307	chr8:72009307:C:G	rs118160015	C	G	C	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr8	72010763	72010764	chr8:72010764:A:G	rs78373992	A	G	A	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr8	72058686	72058687	chr8:72058687:G:C	rs3779754	G	C	g	Hoxd9.mouse_homeodomain_1	8	1	-	7.1462160923678635	7.212456609225008	GCCATAAAC
chr8	72069348	72069349	chr8:72069349:C:T	rs1373297	C	T	C	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr8	73127722	73127723	chr8:73127723:T:C	rs77426262	T	C	T	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr8	73158787	73158788	chr8:73158788:A:G	rs12545313	A	G	G	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr8	73261253	73261254	chr8:73261254:C:G	rs7839016	C	G	C	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr8	73284959	73284960	chr8:73284960:T:C	rs7815444	T	C	T	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr8	73299762	73299763	chr8:73299763:A:C	rs11777905	A	C	A	Hoxd9.mouse_homeodomain_1	7	1	+	7.241935125048919	4.352519355018332	CCCATACAA
chr8	73332500	73332501	chr8:73332501:T:C	rs4738323	T	C	T	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr8	73364252	73364253	chr8:73364253:C:T	rs74483832	C	T	C	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr8	73388065	73388066	chr8:73388066:C:T	rs73316650	C	T	T	Hoxd9.mouse_homeodomain_1	2	1	+	7.654940340027237	1.1674998824035994	CCCGTAAAA
chr8	73484709	73484710	chr8:73484710:A:T	rs77598359	A	T	A	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr8	73498633	73498634	chr8:73498634:G:A	rs2383917	G	A	G	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr8	73606490	73606491	chr8:73606491:C:A	rs1172072929	C	A	C	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr8	73879288	73879289	chr8:73879289:A:C	rs76270763	A	C	A	Hoxd9.mouse_homeodomain_1	6	1	+	8.98901893988973	7.241935125048919	CCCATAAAA
chr8	74268930	74268931	chr8:74268931:C:T	rs185200225	C	T	C	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr8	74735340	74735341	chr8:74735341:C:T	rs10086011	C	T	C	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr8	74749298	74749299	chr8:74749299:T:C	rs4735772	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.678783717710262	7.34470511784777	GCCATAAAA
chr8	75257524	75257525	chr8:75257525:C:T	rs187596654	C	T	C	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr8	75257533	75257534	chr8:75257534:T:A	rs978599	T	A	T	Hoxd9.mouse_homeodomain_1	1	1	-	7.716978748812629	7.363981803377255	GACATAAAA
chr8	75322281	75322282	chr8:75322282:G:T	rs111615568	G	T	G	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr8	75575305	75575306	chr8:75575306:T:C	rs2977952	T	C	T	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr8	75974577	75974578	chr8:75974578:C:T	rs1462431	C	T	T	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr8	75995642	75995643	chr8:75995643:G:A	rs16939220	G	A	G	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr8	76120936	76120937	chr8:76120937:G:A	rs6993034	G	A	G	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr8	76358491	76358492	chr8:76358492:G:A	rs16939267	G	A	A	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr8	76582141	76582142	chr8:76582142:T:C	rs62516760	T	C	T	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr8	76670912	76670913	chr8:76670913:T:G	rs6988755	T	G	G	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr8	76778598	76778599	chr8:76778599:G:A	rs988478044	G	A	G	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr8	76894606	76894607	chr8:76894607:G:A	rs76079222	G	A	G	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr8	76933827	76933828	chr8:76933828:T:C	rs10957825	T	C	C	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr8	77026738	77026739	chr8:77026739:G:A	rs112616781	G	A	G	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr8	77158781	77158782	chr8:77158782:T:C	rs77809082	T	C	T	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr8	77214528	77214529	chr8:77214529:C:A	rs16939460	C	A	C	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr8	77523784	77523785	chr8:77523785:G:A	rs116953475	G	A	G	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr8	77726126	77726127	chr8:77726127:C:T	rs10106895	C	T	C	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr8	77969098	77969099	chr8:77969099:C:T	rs987472	C	T	C	Hoxd9.mouse_homeodomain_1	1	1	+	8.98901893988973	7.674217025556723	CCCATAAAA
chr8	78115019	78115020	chr8:78115020:A:G	rs10099895	A	G	G	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr8	78643912	78643913	chr8:78643913:T:C	rs4739134	T	C	T	Hoxd9.mouse_homeodomain_1	4	1	+	8.027213970992095	5.372167326129518	CACATAAAA
chr8	78849870	78849871	chr8:78849871:C:G	rs16906180	C	G	G	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr8	78892383	78892384	chr8:78892384:A:G	rs4739144	A	G	G	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr8	79146284	79146285	chr8:79146285:G:A	rs186989935	G	A	G	Hoxd9.mouse_homeodomain_1	1	1	-	8.287463081002919	6.972661166669912	CCAATAAAA
chr8	79246635	79246636	chr8:79246636:C:T	rs76832757	C	T	C	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr8	79361388	79361389	chr8:79361389:A:G	rs57937127	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.027213970992095	6.693135371129603	CACATAAAA
chr8	79707128	79707129	chr8:79707129:G:A	rs10504709	G	A	G	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr8	79955647	79955648	chr8:79955648:G:A	chr8:79955648:G:A	G	A	G	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr8	80218769	80218770	chr8:80218770:A:G	rs59572869	A	G	a	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr8	80376689	80376690	chr8:80376690:G:T	rs952557	G	T	T	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr8	80560855	80560856	chr8:80560856:C:T	rs13439005	C	T	C	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr8	80588909	80588910	chr8:80588910:T:C	rs36128702	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.1462160923678635	5.81213749250537	GCCATAAAC
chr8	80698980	80698981	chr8:80698981:A:G	rs74984302	A	G	A	Hoxd9.mouse_homeodomain_1	6	1	+	8.678783717710262	1.9749577711185315	GCCATAAAA
chr8	81001595	81001596	chr8:81001596:T:G	rs74831837	T	G	T	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr8	81014379	81014380	chr8:81014380:T:C	rs77839940	T	C	t	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr8	81063783	81063784	chr8:81063784:G:A	rs35710008	G	A	g	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr8	81099836	81099837	chr8:81099837:T:C	rs9987151	T	C	T	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr8	81099858	81099859	chr8:81099859:T:C	rs12546914	T	C	T	Hoxd9.mouse_homeodomain_1	5	1	-	8.678783717710262	2.304593999463707	GCCATAAAA
chr8	81117129	81117130	chr8:81117130:C:T	rs114331709	C	T	C	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr8	81216673	81216674	chr8:81216674:C:A	rs967219153	C	A	C	Hoxd9.mouse_homeodomain_1	1	1	+	7.1462160923678635	6.184411123470229	GCCATAAAC
chr8	81672454	81672455	chr8:81672455:C:G	chr8:81672455:C:G	C	G	C	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr8	81838730	81838731	chr8:81838731:A:G	rs56400334	A	G	A	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr8	81880669	81880670	chr8:81880670:A:G	rs12056662	A	G	G	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr8	81880678	81880679	chr8:81880679:C:T	rs10958048	C	T	C	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr8	82148146	82148147	chr8:82148147:A:C	rs968447163	A	C	A	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr8	82182584	82182585	chr8:82182585:G:C	rs13263522	G	C	G	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr8	82363132	82363133	chr8:82363133:T:C	rs6473342	T	C	C	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr8	82372625	82372626	chr8:82372626:G:A	rs28859707	G	A	G	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr8	82825749	82825750	chr8:82825750:A:G	rs118169718	A	G	a	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr8	82843978	82843979	chr8:82843979:T:C	rs7818357	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.409487817756228	7.075409217893736	CCCATTAAA
chr8	82874234	82874235	chr8:82874235:A:G	rs7814023	A	G	A	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr8	83610912	83610913	chr8:83610913:C:A	rs13264765	C	A	-	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr8	83611068	83611069	chr8:83611069:C:T	rs7012137	C	T	-	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr8	84031822	84031823	chr8:84031823:C:T	rs56137527	C	T	C	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr8	84082841	84082842	chr8:84082842:A:G	rs11775916	A	G	G	Hoxd9.mouse_homeodomain_1	4	1	-	7.091711387329735	4.436664742467157	CCCATCAAA
chr8	84659061	84659062	chr8:84659062:G:A	rs2029358	G	A	G	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr8	84806458	84806459	chr8:84806459:C:A	rs111652921	C	A	C	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr8	85381034	85381035	chr8:85381035:G:T	rs184880542	G	T	G	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr8	85466571	85466572	chr8:85466572:G:A	rs146125356	G	A	G	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr8	85993818	85993819	chr8:85993819:T:C	rs185901	T	C	T	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr8	86163301	86163302	chr8:86163302:A:C	rs72606622	A	C	C	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr8	86163326	86163327	chr8:86163327:C:T	rs7461255	C	T	T	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr8	86202116	86202117	chr8:86202117:C:T	rs34440851	C	T	T	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr8	86338404	86338405	chr8:86338405:G:A	rs7462727	G	A	A	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr8	86703574	86703575	chr8:86703575:C:T	rs368598528	C	T	C	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr8	86742166	86742167	chr8:86742167:G:T	rs1458119	G	T	T	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr8	86893022	86893023	chr8:86893023:C:G	rs10955093	C	G	C	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr8	86926793	86926794	chr8:86926794:T:C	rs4255154	T	C	C	Hoxd9.mouse_homeodomain_1	4	1	+	7.45645131454733	4.801404669684752	CCCATAAAC
chr8	87061527	87061528	chr8:87061528:T:C	rs75495130	T	C	T	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr8	87365470	87365471	chr8:87365471:A:G	rs10283270	A	G	G	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr8	87404229	87404230	chr8:87404230:T:C	rs10105587	T	C	T	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr8	87522626	87522627	chr8:87522627:A:G	rs428068	A	G	A	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr8	87944085	87944086	chr8:87944086:A:G	rs6469118	A	G	G	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr8	88102526	88102527	chr8:88102527:A:G	rs12678400	A	G	A	Hoxd9.mouse_homeodomain_1	4	1	-	7.889898683853121	5.234852038990543	ACCATAAAA
chr8	88268070	88268071	chr8:88268071:G:A	rs145828528	G	A	G	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr8	88418607	88418608	chr8:88418608:T:G	rs10098834	T	G	G	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr8	88484978	88484979	chr8:88484979:A:G	rs143180223	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.678783717710262	7.34470511784777	GCCATAAAA
chr8	88651766	88651767	chr8:88651767:G:A	rs9886505	G	A	G	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr8	88876545	88876546	chr8:88876546:T:C	rs7006924	T	C	T	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr8	88880416	88880417	chr8:88880417:C:T	rs2454333	C	T	C	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr8	88941465	88941466	chr8:88941466:G:C	rs4347029	G	C	G	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr8	88941478	88941479	chr8:88941479:C:T	rs6981294	C	T	T	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr8	89071897	89071898	chr8:89071898:A:T	rs112047565	A	T	A	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr8	89584672	89584673	chr8:89584673:C:T	rs9297679	C	T	C	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr8	89659155	89659156	chr8:89659156:G:C	rs160427	G	C	c	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr8	89721586	89721587	chr8:89721587:A:C	chr8:89721587:A:C	A	C	A	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr8	89815823	89815824	chr8:89815824:T:C	rs40638	T	C	C	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr8	89852167	89852168	chr8:89852168:G:C	rs367640	G	C	C	Hoxd9.mouse_homeodomain_1	2	1	-	7.1462160923678635	3.6782244349155326	GCCATAAAC
chr8	89885355	89885356	chr8:89885356:A:G	rs989385	A	G	G	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr8	89887133	89887134	chr8:89887134:G:T	rs16901429	G	T	G	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr8	89887138	89887139	chr8:89887139:T:C	rs60259111	T	C	T	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr8	89972574	89972575	chr8:89972575:G:C	rs741778	G	C	G	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr8	90083244	90083245	chr8:90083245:A:T	rs1800645	A	T	T	Hoxd9.mouse_homeodomain_1	8	1	+	8.027213970992095	5.094700846226028	CACATAAAA
chr8	90295255	90295256	chr8:90295256:T:A	rs2879345	T	A	A	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr8	90419979	90419980	chr8:90419980:G:A	rs11994061	G	A	g	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr8	90644924	90644925	chr8:90644925:G:A	rs78040570	G	A	G	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr8	90943092	90943093	chr8:90943093:T:C	rs74574415	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.409487817756228	7.075409217893736	CCCATTAAA
chr8	91070081	91070082	chr8:91070082:T:C	rs139068740	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.212456609225008	5.878378009362515	GCCATAAAG
chr8	91070090	91070091	chr8:91070091:C:G	rs61515687	C	G	c	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr8	91117673	91117674	chr8:91117674:T:C	rs566474970	T	C	T	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr8	91180441	91180442	chr8:91180442:A:G	rs73697136	A	G	A	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr8	92583590	92583591	chr8:92583591:T:C	rs1449248	T	C	T	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr8	92618231	92618232	chr8:92618232:C:T	rs2618127	C	T	T	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr8	92782823	92782824	chr8:92782824:C:T	rs10112398	C	T	T	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr8	93309307	93309308	chr8:93309308:A:G	rs28379679	A	G	A	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr8	93675933	93675934	chr8:93675934:C:T	rs13269395	C	T	C	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr8	93694069	93694070	chr8:93694070:T:C	rs76690808	T	C	T	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr8	93733157	93733158	chr8:93733158:G:T	rs16916186	G	T	T	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr8	93880421	93880422	chr8:93880422:G:A	rs78819146	G	A	G	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr8	94115667	94115668	chr8:94115668:T:G	rs2513788	T	G	T	Hoxd9.mouse_homeodomain_1	7	1	-	8.98901893988973	6.099603169859144	CCCATAAAA
chr8	94165487	94165488	chr8:94165488:G:A	rs73266247	G	A	A	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr8	94169714	94169715	chr8:94169715:A:T	rs112802320	A	T	A	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr8	94206425	94206426	chr8:94206426:A:G	rs9643341	A	G	A	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr8	94224560	94224561	chr8:94224561:G:A	rs2613229	G	A	T	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr8	94234506	94234507	chr8:94234507:C:T	rs2613209	C	T	T	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr8	94234528	94234529	chr8:94234529:T:C	rs59141736	T	C	T	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr8	94346712	94346713	chr8:94346713:T:C	rs55713629	T	C	T	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr8	94357326	94357327	chr8:94357327:T:C	rs72672675	T	C	T	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr8	94726488	94726489	chr8:94726489:A:G	rs7816645	A	G	a	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr8	94742062	94742063	chr8:94742063:A:G	rs28750318	A	G	G	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr8	94814944	94814945	chr8:94814945:C:T	rs4355737	C	T	T	Hoxd9.mouse_homeodomain_1	2	1	+	8.678783717710262	2.1913432600866263	GCCATAAAA
chr8	94962732	94962733	chr8:94962733:T:C	rs7823059	T	C	C	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr8	94965892	94965893	chr8:94965893:C:G	rs112076731	C	G	C	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr8	95012840	95012841	chr8:95012841:C:A	rs10110635	C	A	A	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr8	95012864	95012865	chr8:95012865:T:A	rs10100089	T	A	A	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr8	95198390	95198391	chr8:95198391:T:C	rs1429010314	T	C	T	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr8	95217788	95217789	chr8:95217789:G:C	rs74956051	G	C	G	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr8	95493746	95493747	chr8:95493747:G:A	rs7842490	G	A	g	Hoxd9.mouse_homeodomain_1	2	1	-	7.34470511784777	0.8572646602241328	GCCGTAAAA
chr8	95503851	95503852	chr8:95503852:G:T	rs2047645	G	T	G	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr8	95843109	95843110	chr8:95843110:C:G	rs558178	C	G	G	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr8	96318522	96318523	chr8:96318523:A:C	rs7824518	A	C	A	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr8	96345224	96345225	chr8:96345225:C:A	rs56138709	C	A	C	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr8	96456545	96456546	chr8:96456546:G:A	rs974272	G	A	G	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr8	96520299	96520300	chr8:96520300:A:G	rs116973343	A	G	A	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr8	96570836	96570837	chr8:96570837:T:A	rs724236	T	A	A	Hoxd9.mouse_homeodomain_1	7	1	-	7.9772278588234515	6.230144043982641	GCAATAAAA
chr8	96570917	96570918	chr8:96570918:A:G	rs75531207	A	G	A	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr8	96585547	96585548	chr8:96585548:G:A	rs2651473	G	A	G	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr8	96809411	96809412	chr8:96809412:A:G	rs185435006	A	G	A	Hoxd9.mouse_homeodomain_1	8	1	+	7.9772278588234515	6.510900750338196	GCAATAAAA
chr8	96855788	96855789	chr8:96855789:A:T	rs35664131	A	T	A	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr8	96988798	96988799	chr8:96988799:G:A	rs2853273	G	A	A	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr8	97788105	97788106	chr8:97788106:A:C	rs4734371	A	C	A	Hoxd9.mouse_homeodomain_1	8	1	+	8.287463081002919	6.75489545566052	CCAATAAAA
chr8	97802537	97802538	chr8:97802538:C:T	rs6468592	C	T	c	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr8	98136930	98136931	chr8:98136931:A:G	rs149039184	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	7.9772278588234515	6.643149258960959	GCAATAAAA
chr8	98324262	98324263	chr8:98324263:G:A	rs148137008	G	A	G	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr8	98358316	98358317	chr8:98358317:T:C	rs73272040	T	C	T	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr8	98385806	98385807	chr8:98385807:A:C	rs17310375	A	C	A	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr8	98670714	98670715	chr8:98670715:C:T	rs11780292	C	T	C	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr8	98800937	98800938	chr8:98800938:G:A	rs377194917	G	A	g	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr8	99301342	99301343	chr8:99301343:C:G	rs10104264	C	G	g	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr8	99636886	99636887	chr8:99636887:G:T	rs35462366	G	T	G	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr8	99768094	99768095	chr8:99768095:C:T	rs75619331	C	T	C	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr8	100336857	100336858	chr8:100336858:C:T	rs11991535	C	T	C	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr8	100459745	100459746	chr8:100459746:G:A	rs62518315	G	A	G	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr8	100558893	100558894	chr8:100558894:T:A	rs60349767	T	A	T	Hoxd9.mouse_homeodomain_1	4	1	+	7.716978748812629	0.875160301482023	GACATAAAA
chr8	100720165	100720166	chr8:100720166:A:G	rs59386530	A	G	A	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr8	100791792	100791793	chr8:100791793:T:C	rs3104327	T	C	C	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr8	100886438	100886439	chr8:100886439:C:T	rs73699266	C	T	T	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr8	101061300	101061301	chr8:101061301:C:T	rs75595445	C	T	C	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr8	101095645	101095646	chr8:101095646:G:T	rs2599529	G	T	T	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr8	101180864	101180865	chr8:101180865:A:G	rs2197624	A	G	g	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr8	101296134	101296135	chr8:101296135:G:A	rs660903	G	A	G	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr8	101383239	101383240	chr8:101383240:G:A	rs28853591	G	A	A	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr8	101544989	101544990	chr8:101544990:C:A	rs666026	C	A	A	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr8	101635762	101635763	chr8:101635763:A:C	rs112403140	A	C	A	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr8	101701319	101701320	chr8:101701320:G:A	rs77995623	G	A	G	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr8	101737557	101737558	chr8:101737558:G:C	rs7844838	G	C	C	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr8	102129698	102129699	chr8:102129699:A:G	rs780109888	A	G	A	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr8	102260327	102260328	chr8:102260328:C:T	rs76140214	C	T	c	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr8	102417346	102417347	chr8:102417347:G:A	rs72681200	G	A	G	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr8	102617799	102617800	chr8:102617800:G:A	rs17186961	G	A	G	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr8	102725859	102725860	chr8:102725860:T:C	rs11995590	T	C	T	Hoxd9.mouse_homeodomain_1	5	1	-	8.287463081002919	1.9132733627563638	CCAATAAAA
chr8	102752362	102752363	chr8:102752363:A:T	rs138369448	A	T	A	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr8	102806185	102806186	chr8:102806186:G:A	rs185122088	G	A	G	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr8	102808293	102808294	chr8:102808294:G:C	rs62522574	G	C	G	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr8	102818463	102818464	chr8:102818464:A:G	rs2513920	A	G	A	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr8	102877483	102877484	chr8:102877484:A:G	rs17197341	A	G	A	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr8	103076761	103076762	chr8:103076762:T:C	rs74711689	T	C	T	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr8	103142982	103142983	chr8:103142983:C:G	rs193263166	C	G	C	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr8	103186440	103186441	chr8:103186441:T:C	rs6989822	T	C	T	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr8	103353920	103353921	chr8:103353921:T:G	rs3133838	T	G	T	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr8	103660495	103660496	chr8:103660496:G:A	rs16870616	G	A	A	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr8	103844061	103844062	chr8:103844062:A:G	rs1851150	A	G	a	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr8	104124320	104124321	chr8:104124321:G:T	rs10505055	G	T	G	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr8	104241611	104241612	chr8:104241612:A:G	rs2511586	A	G	A	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr8	104339714	104339715	chr8:104339715:C:T	rs2514666	C	T	T	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr8	104401527	104401528	chr8:104401528:T:C	rs2853158	T	C	T	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr8	104868115	104868116	chr8:104868116:A:G	rs10111983	A	G	G	Hoxd9.mouse_homeodomain_1	5	1	+	7.1462160923678635	0.7720263741213071	GCCATAAAC
chr8	105066662	105066663	chr8:105066663:C:A	rs73697285	C	A	C	Hoxd9.mouse_homeodomain_1	0	1	-	7.1462160923678635	5.561904009238388	GCCATAAAC
chr8	105359967	105359968	chr8:105359968:C:T	rs33992903	C	T	T	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr8	105575844	105575845	chr8:105575845:A:G	rs1429015189	A	G	A	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr8	105781957	105781958	chr8:105781958:T:G	rs77057417	T	G	T	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr8	106075315	106075316	chr8:106075316:A:G	rs113307784	A	G	A	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr8	106415248	106415249	chr8:106415249:G:T	rs7012963	G	T	G	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr8	106434474	106434475	chr8:106434475:T:G	rs10955424	T	G	G	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr8	106669200	106669201	chr8:106669201:A:T	rs3110440	A	T	A	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr8	106697229	106697230	chr8:106697230:A:G	rs1676418	A	G	A	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr8	106889866	106889867	chr8:106889867:C:A	rs71522793	C	A	C	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr8	106901057	106901058	chr8:106901058:T:A	rs4618669	T	A	T	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr8	106925976	106925977	chr8:106925977:C:A	rs1350885	C	A	C	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr8	106935855	106935856	chr8:106935856:A:G	rs981295	A	G	G	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr8	107387402	107387403	chr8:107387403:G:A	rs1283707	G	A	G	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr8	107480011	107480012	chr8:107480012:A:C	rs1433171	A	C	C	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr8	107626115	107626116	chr8:107626116:G:A	rs12114833	G	A	G	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr8	107750983	107750984	chr8:107750984:T:C	rs7012422	T	C	T	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr8	107756118	107756119	chr8:107756119:G:A	rs10098451	G	A	G	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr8	107777587	107777588	chr8:107777588:T:C	rs4534106	T	C	T	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr8	107787246	107787247	chr8:107787247:G:A	rs4735012	G	A	G	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr8	107987562	107987563	chr8:107987563:G:T	rs28481410	G	T	G	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr8	108497913	108497914	chr8:108497914:G:A	rs4735066	G	A	A	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr8	108739651	108739652	chr8:108739652:C:G	rs1497633	C	G	G	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr8	108751621	108751622	chr8:108751622:G:C	rs3019897	G	C	C	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr8	108753420	108753421	chr8:108753421:A:C	rs3019895	A	C	C	Hoxd9.mouse_homeodomain_1	5	1	+	8.678783717710262	6.781476165150267	GCCATAAAA
chr8	108805156	108805157	chr8:108805157:C:G	rs6469207	C	G	G	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr8	109082707	109082708	chr8:109082708:C:T	chr8:109082708:C:T	C	T	C	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr8	109129501	109129502	chr8:109129502:C:A	rs75999359	C	A	C	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr8	109129507	109129508	chr8:109129508:G:A	rs9297421	G	A	G	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr8	109393169	109393170	chr8:109393170:T:C	rs1457290	T	C	C	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr8	109536199	109536200	chr8:109536200:T:C	rs113649142	T	C	T	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr8	109536218	109536219	chr8:109536219:G:A	rs7011803	G	A	A	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr8	109570681	109570682	chr8:109570682:T:A	rs189393172	T	A	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.091711387329735	5.08823025052109	CCCATCAAA
chr8	109588331	109588332	chr8:109588332:A:C	rs142444677	A	C	A	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr8	109611427	109611428	chr8:109611428:A:C	rs965711125	A	C	A	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr8	109617952	109617953	chr8:109617953:G:A	rs2022930	G	A	G	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr8	110047788	110047789	chr8:110047789:A:G	rs73310317	A	G	A	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr8	110300854	110300855	chr8:110300855:C:G	rs77110101	C	G	G	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr8	110892991	110892992	chr8:110892992:A:G	rs2351322	A	G	G	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr8	111264937	111264938	chr8:111264938:A:G	rs76353024	A	G	A	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr8	111679658	111679659	chr8:111679659:C:A	rs76465379	C	A	c	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr8	111746283	111746284	chr8:111746284:A:G	rs7826804	A	G	G	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr8	111758664	111758665	chr8:111758665:C:A	rs35090458	C	A	c	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr8	112856484	112856485	chr8:112856485:T:C	rs231305	T	C	T	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr8	113572237	113572238	chr8:113572238:G:A	rs56801275	G	A	G	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr8	114100117	114100118	chr8:114100118:C:T	rs62542886	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	-	7.1462160923678635	6.357331058510722	GCCATAAAC
chr8	114249967	114249968	chr8:114249968:T:C	rs16885615	T	C	T	Hoxd9.mouse_homeodomain_1	5	1	-	7.716978748812629	1.3427890305660735	GACATAAAA
chr8	114592930	114592931	chr8:114592931:A:C	rs72688157	A	C	A	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr8	114880824	114880825	chr8:114880825:C:T	rs7816550	C	T	T	Hoxd9.mouse_homeodomain_1	0	1	+	8.409487817756228	6.514940512447287	CCCATTAAA
chr8	115084265	115084266	chr8:115084266:T:C	rs62513431	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.287463081002919	6.953384481140425	CCAATAAAA
chr8	115084266	115084267	chr8:115084267:T:C	rs548529664	T	C	T	Hoxd9.mouse_homeodomain_1	2	1	-	8.287463081002919	5.5210272824374	CCAATAAAA
chr8	115084895	115084896	chr8:115084896:T:C	rs2357832	T	C	C	Hoxd9.mouse_homeodomain_1	6	1	-	8.027213970992095	1.3233880244003648	CACATAAAA
chr8	115419954	115419955	chr8:115419955:T:C	rs73367435	T	C	T	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr8	115419957	115419958	chr8:115419958:A:C	chr8:115419958:A:C	A	C	A	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr8	115814752	115814753	chr8:115814753:A:G	rs74363401	A	G	A	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr8	115915474	115915475	chr8:115915475:G:A	rs6982767	G	A	G	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr8	116354561	116354562	chr8:116354562:A:C	rs143228264	A	C	A	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr8	116471861	116471862	chr8:116471862:A:C	rs6469646	A	C	A	Hoxd9.mouse_homeodomain_1	6	1	+	7.716978748812629	5.969894933971817	GACATAAAA
chr8	116477690	116477691	chr8:116477691:G:A	rs4876355	G	A	G	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr8	116601560	116601561	chr8:116601561:C:A	rs10435543	C	A	c	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr8	116765674	116765675	chr8:116765675:C:G	rs4876680	C	G	G	Hoxd9.mouse_homeodomain_1	0	1	+	8.027213970992095	7.716978748812629	CACATAAAA
chr8	116766061	116766062	chr8:116766062:G:C	rs1409349198	G	C	G	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr8	117252979	117252980	chr8:117252980:C:T	rs2705248	C	T	C	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr8	117315875	117315876	chr8:117315876:G:A	rs2036241	G	A	G	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr8	117399875	117399876	chr8:117399876:A:T	rs1686348	A	T	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.98901893988973	6.985537803081085	CCCATAAAA
chr8	117603118	117603119	chr8:117603119:T:A	rs16889975	T	A	T	Hoxd9.mouse_homeodomain_1	0	1	-	7.889898683853121	7.094471634580788	ACCATAAAA
chr8	117670181	117670182	chr8:117670182:T:C	rs189811407	T	C	T	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr8	117715705	117715706	chr8:117715706:G:A	rs17753630	G	A	g	Hoxd9.mouse_homeodomain_1	3	1	+	7.34470511784777	8.678783717710262	GCCGTAAAA
chr8	117715761	117715762	chr8:117715762:C:A	rs11785759	C	A	A	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr8	117831799	117831800	chr8:117831800:T:C	rs12682457	T	C	T	Hoxd9.mouse_homeodomain_1	4	1	+	7.9772278588234515	5.3221812139608735	GCAATAAAA
chr8	117849653	117849654	chr8:117849654:A:T	rs10098795	A	T	T	Hoxd9.mouse_homeodomain_1	3	1	+	8.287463081002919	6.2839819441942755	CCAATAAAA
chr8	117850607	117850608	chr8:117850608:T:G	rs10089630	T	G	G	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr8	117921359	117921360	chr8:117921360:A:G	rs3134312	A	G	A	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr8	118029991	118029992	chr8:118029992:T:C	rs17476497	T	C	T	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr8	118044827	118044828	chr8:118044828:C:T	rs13277610	C	T	C	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr8	118050644	118050645	chr8:118050645:T:G	rs7004377	T	G	G	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr8	118164418	118164419	chr8:118164419:A:G	rs139923816	A	G	A	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr8	118345885	118345886	chr8:118345886:A:G	chr8:118345886:A:G	A	G	A	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr8	118495081	118495082	chr8:118495082:T:C	rs2515051	T	C	T	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr8	118690375	118690376	chr8:118690376:T:C	rs2326051	T	C	T	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr8	118690377	118690378	chr8:118690378:G:C	rs2326050	G	C	C	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr8	118967829	118967830	chr8:118967830:A:G	rs6992497	A	G	G	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr8	118996131	118996132	chr8:118996132:T:C	rs6469792	T	C	T	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr8	119107657	119107658	chr8:119107658:G:A	rs72682437	G	A	G	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr8	119390900	119390901	chr8:119390901:C:T	rs117331970	C	T	C	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr8	119495789	119495790	chr8:119495790:T:A	rs6469828	T	A	T	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr8	119886210	119886211	chr8:119886211:A:G	rs17220787	A	G	A	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr8	119931266	119931267	chr8:119931267:T:G	rs55892034	T	G	G	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr8	120123526	120123527	chr8:120123527:C:A	rs111432200	C	A	C	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr8	120165104	120165105	chr8:120165105:A:G	chr8:120165105:A:G	A	G	A	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr8	120207580	120207581	chr8:120207581:T:C	rs957694	T	C	C	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr8	120207586	120207587	chr8:120207587:A:T	rs957695	A	T	T	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr8	120342611	120342612	chr8:120342612:G:A	rs2290523	G	A	A	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr8	120446117	120446118	chr8:120446118:A:G	rs4242314	A	G	A	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr8	120742308	120742309	chr8:120742309:T:A	rs60631202	T	A	A	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr8	120762182	120762183	chr8:120762183:A:G	rs10955987	A	G	G	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr8	120916013	120916014	chr8:120916014:T:C	rs6990987	T	C	C	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr8	121085626	121085627	chr8:121085627:C:G	rs73318915	C	G	G	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr8	121129451	121129452	chr8:121129452:T:C	rs2163920	T	C	t	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr8	121191474	121191475	chr8:121191475:T:G	rs4579536	T	G	T	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr8	121191485	121191486	chr8:121191486:G:A	rs7463285	G	A	G	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr8	121285200	121285201	chr8:121285201:G:A	rs16895033	G	A	A	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr8	121357322	121357323	chr8:121357323:T:G	chr8:121357323:T:G	T	G	T	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr8	121404280	121404281	chr8:121404281:T:C	rs6984809	T	C	T	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr8	121474306	121474307	chr8:121474307:G:T	rs7001638	G	T	G	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr8	121636089	121636090	chr8:121636090:G:A	rs62524938	G	A	G	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr8	121640179	121640180	chr8:121640180:C:T	rs567211555	C	T	C	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr8	121674448	121674449	chr8:121674449:A:C	rs73322728	A	C	A	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr8	121773435	121773436	chr8:121773436:G:A	rs279619	G	A	G	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr8	122128120	122128121	chr8:122128121:A:G	rs2136635	A	G	a	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr8	122281053	122281054	chr8:122281054:G:T	rs4518676	G	T	T	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr8	122324957	122324958	chr8:122324958:C:T	rs1955047	C	T	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.654940340027237	8.98901893988973	CCCGTAAAA
chr8	122572558	122572559	chr8:122572559:C:T	rs540644791	C	T	C	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr8	122592740	122592741	chr8:122592741:A:G	rs77732209	A	G	A	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr8	122884850	122884851	chr8:122884851:G:A	rs550523820	G	A	G	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr8	122936642	122936643	chr8:122936643:G:T	rs752587306	G	T	G	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr8	123072365	123072366	chr8:123072366:G:C	rs4871343	G	C	C	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr8	123286204	123286205	chr8:123286205:G:C	rs13250217	G	C	C	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr8	123541341	123541342	chr8:123541342:C:G	rs575309722	C	G	c	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr8	123541342	123541343	chr8:123541343:G:C	rs576443295	G	C	g	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr8	123541344	123541345	chr8:123541345:G:A	rs114794639	G	A	g	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr8	123561358	123561359	chr8:123561359:G:T	rs62518436	G	T	G	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr8	123664089	123664090	chr8:123664090:T:C	rs6982035	T	C	C	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr8	123739343	123739344	chr8:123739344:T:G	rs6470180	T	G	T	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr8	123907110	123907111	chr8:123907111:T:C	rs7822699	T	C	T	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr8	124141559	124141560	chr8:124141560:T:C	chr8:124141560:T:C	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.889898683853121	6.555820083990628	ACCATAAAA
chr8	124271645	124271646	chr8:124271646:T:C	rs13439237	T	C	T	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr8	124271652	124271653	chr8:124271653:C:T	rs78574616	C	T	C	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr8	124355305	124355306	chr8:124355306:T:G	rs17369737	T	G	T	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr8	124422568	124422569	chr8:124422569:G:A	rs72710893	G	A	G	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr8	124450183	124450184	chr8:124450184:C:A	chr8:124450184:C:A	C	A	C	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr8	124450183	124450184	chr8:124450184:C:T	rs4621790	C	T	C	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr8	124450731	124450732	chr8:124450732:G:A	rs115174386	G	A	G	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr8	124450744	124450745	chr8:124450745:G:C	rs6981043	G	C	G	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr8	124600896	124600897	chr8:124600897:G:A	rs76981711	G	A	G	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr8	124604474	124604475	chr8:124604475:A:G	rs73341856	A	G	A	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr8	124610290	124610291	chr8:124610291:A:C	rs4464955	A	C	A	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr8	124635806	124635807	chr8:124635807:G:A	rs565657274	G	A	G	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr8	124718552	124718553	chr8:124718553:C:T	rs117045236	C	T	C	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr8	124738822	124738823	chr8:124738823:A:G	rs7006084	A	G	G	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr8	124738857	124738858	chr8:124738858:G:A	rs4870925	G	A	A	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr8	124745890	124745891	chr8:124745891:G:A	rs67551436	G	A	g	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr8	124941881	124941882	chr8:124941882:T:G	rs10956225	T	G	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.678783717710262	2.1032756135067814	GCCATAAAA
chr8	125091030	125091031	chr8:125091031:C:A	rs142254336	C	A	C	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr8	125175771	125175772	chr8:125175772:A:G	rs28469260	A	G	A	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr8	125271745	125271746	chr8:125271746:T:A	rs376465845	T	A	T	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr8	125314214	125314215	chr8:125314215:A:G	rs142891049	A	G	A	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr8	125466885	125466886	chr8:125466886:C:T	rs6982180	C	T	C	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr8	125657476	125657477	chr8:125657477:A:G	rs1551405	A	G	A	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr8	125746595	125746596	chr8:125746596:T:C	rs77457945	T	C	T	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr8	126099059	126099060	chr8:126099060:G:A	rs72712723	G	A	G	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr8	126279464	126279465	chr8:126279465:C:G	rs11985615	C	G	C	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr8	126279473	126279474	chr8:126279474:C:A	rs10090547	C	A	C	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr8	126423757	126423758	chr8:126423758:A:G	rs4871711	A	G	G	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr8	126570619	126570620	chr8:126570620:C:T	rs139735484	C	T	C	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr8	126571759	126571760	chr8:126571760:A:G	rs7832762	A	G	G	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr8	126581252	126581253	chr8:126581253:A:T	rs7817056	A	T	T	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr8	126846375	126846376	chr8:126846376:C:T	rs11992578	C	T	T	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr8	127169233	127169234	chr8:127169234:T:C	rs2456458	T	C	C	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr8	127224575	127224576	chr8:127224576:A:G	rs953668	A	G	A	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr8	127398100	127398101	chr8:127398101:C:T	rs3843548	C	T	T	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr8	127586313	127586314	chr8:127586314:T:C	rs74534346	T	C	T	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr8	127612733	127612734	chr8:127612734:G:C	rs7843970	G	C	G	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr8	127630985	127630986	chr8:127630986:A:G	rs6989963	A	G	G	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr8	127739079	127739080	chr8:127739080:T:C	rs4645962	T	C	T	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr8	127903251	127903252	chr8:127903252:T:G	rs7843833	T	G	G	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr8	127908108	127908109	chr8:127908109:T:G	chr8:127908109:T:G	T	G	T	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr8	128035078	128035079	chr8:128035079:G:A	rs2173537	G	A	G	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr8	128035083	128035084	chr8:128035084:G:A	rs188467158	G	A	G	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr8	128176592	128176593	chr8:128176593:C:T	rs138210859	C	T	C	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr8	128176604	128176605	chr8:128176605:C:A	rs12545591	C	A	A	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr8	128194239	128194240	chr8:128194240:A:C	rs7007953	A	C	A	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr8	128201719	128201720	chr8:128201720:T:A	rs73707445	T	A	T	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr8	128247160	128247161	chr8:128247161:T:G	rs4518623	T	G	G	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr8	128318895	128318896	chr8:128318896:G:C	rs4415277	G	C	C	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr8	128428108	128428109	chr8:128428109:T:C	rs4333551	T	C	T	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr8	128428137	128428138	chr8:128428138:G:T	rs16902941	G	T	G	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr8	128851286	128851287	chr8:128851287:T:A	rs873761	T	A	A	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr8	128935635	128935636	chr8:128935636:G:T	rs12548036	G	T	G	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr8	129161438	129161439	chr8:129161439:C:T	rs4645526	C	T	C	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr8	129253498	129253499	chr8:129253499:A:G	rs10092270	A	G	a	Hoxd9.mouse_homeodomain_1	1	1	+	8.027213970992095	2.5794857111073646	CACATAAAA
chr8	129364304	129364305	chr8:129364305:C:T	rs16904047	C	T	C	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr8	129535301	129535302	chr8:129535302:G:T	rs7843951	G	T	G	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr8	129613637	129613638	chr8:129613638:C:T	rs16893247	C	T	C	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr8	129727888	129727889	chr8:129727889:G:T	rs7011557	G	T	G	Hoxd9.mouse_homeodomain_1	2	1	-	8.027213970992095	7.325658112105286	CACATAAAA
chr8	129816653	129816654	chr8:129816654:C:T	rs2624802	C	T	T	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr8	130017375	130017376	chr8:130017376:T:A	rs747500	T	A	T	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr8	130046013	130046014	chr8:130046014:G:A	rs560169993	G	A	G	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr8	130134597	130134598	chr8:130134598:C:T	rs34014736	C	T	C	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr8	130204948	130204949	chr8:130204949:T:C	rs11775292	T	C	C	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr8	130408182	130408183	chr8:130408183:G:T	rs6986119	G	T	G	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr8	130493748	130493749	chr8:130493749:A:G	rs28391082	A	G	A	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr8	130527844	130527845	chr8:130527845:G:A	rs73414514	G	A	G	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr8	130669154	130669155	chr8:130669155:T:C	rs6470833	T	C	T	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr8	130716484	130716485	chr8:130716485:A:G	rs7817427	A	G	G	Hoxd9.mouse_homeodomain_1	7	1	+	7.212456609225008	0.5086306626332764	GCCATAAAG
chr8	130769763	130769764	chr8:130769764:G:A	rs13259734	G	A	G	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr8	131127232	131127233	chr8:131127233:G:A	rs34475637	G	A	A	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr8	131618473	131618474	chr8:131618474:G:A	rs172124	G	A	A	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr8	131814473	131814474	chr8:131814474:C:T	rs75597130	C	T	C	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr8	132390471	132390472	chr8:132390472:A:G	rs2673589	A	G	A	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr8	132651851	132651852	chr8:132651852:A:G	rs146418312	A	G	A	Hoxd9.mouse_homeodomain_1	8	1	+	7.34470511784777	5.878378009362515	GCCGTAAAA
chr8	132761151	132761152	chr8:132761152:C:T	rs182310712	C	T	C	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr8	132831221	132831222	chr8:132831222:T:A	rs6989647	T	A	A	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr8	132954098	132954099	chr8:132954099:C:G	rs879811	C	G	C	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr8	132954102	132954103	chr8:132954103:A:C	rs9643296	A	C	A	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr8	133072394	133072395	chr8:133072395:A:G	rs4736623	A	G	A	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr8	133072554	133072555	chr8:133072555:G:A	rs2703004	G	A	A	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr8	133096301	133096302	chr8:133096302:T:C	rs2069569	T	C	C	Hoxd9.mouse_homeodomain_1	3	1	-	7.522691831404475	6.188613231541982	CCCATAAAG
chr8	133180829	133180830	chr8:133180830:C:T	rs11782936	C	T	C	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr8	133378424	133378425	chr8:133378425:A:G	rs7007081	A	G	G	Hoxd9.mouse_homeodomain_1	4	1	-	8.027213970992095	5.372167326129518	CACATAAAA
chr8	133434984	133434985	chr8:133434985:G:A	rs2736858	G	A	G	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr8	133470141	133470142	chr8:133470142:A:G	rs3779922	A	G	.	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr8	133575314	133575315	chr8:133575315:A:G	rs55655440	A	G	A	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr8	133633809	133633810	chr8:133633810:C:T	rs72722197	C	T	C	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr8	133702545	133702546	chr8:133702546:C:T	rs2958807	C	T	T	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr8	133702550	133702551	chr8:133702551:C:A	rs2958808	C	A	C	Hoxd9.mouse_homeodomain_1	1	1	+	8.98901893988973	8.027213970992095	CCCATAAAA
chr8	133707793	133707794	chr8:133707794:C:T	rs13277023	C	T	c	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr8	133926142	133926143	chr8:133926143:G:T	rs11994154	G	T	T	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr8	134116546	134116547	chr8:134116547:A:T	rs17677384	A	T	A	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr8	134161609	134161610	chr8:134161610:G:A	rs35434640	G	A	G	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr8	134239939	134239940	chr8:134239940:A:G	rs16905132	A	G	A	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr8	134450339	134450340	chr8:134450340:T:C	rs4075461	T	C	C	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr8	134450373	134450374	chr8:134450374:T:C	rs4075462	T	C	C	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr8	134470230	134470231	chr8:134470231:C:T	rs59521237	C	T	C	Hoxd9.mouse_homeodomain_1	5	1	+	7.091711387329735	8.409487817756228	CCCATCAAA
chr8	134538934	134538935	chr8:134538935:T:A	rs10481417	T	A	A	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr8	134694147	134694148	chr8:134694148:C:G	rs7463826	C	G	C	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr8	134769733	134769734	chr8:134769734:A:G	rs10094900	A	G	g	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr8	134921797	134921798	chr8:134921798:A:T	rs11786795	A	T	A	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr8	135044810	135044811	chr8:135044811:T:C	rs16905279	T	C	T	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr8	135176656	135176657	chr8:135176657:T:C	rs1871727	T	C	T	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr8	135655266	135655267	chr8:135655267:C:T	rs72734032	C	T	C	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr8	136017070	136017071	chr8:136017071:A:G	rs34003049	A	G	A	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr8	136017077	136017078	chr8:136017078:C:A	rs13277193	C	A	C	Hoxd9.mouse_homeodomain_1	2	1	+	7.212456609225008	6.510900750338196	GCCATAAAG
chr8	136049444	136049445	chr8:136049445:G:T	rs4909551	G	T	G	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr8	136080089	136080090	chr8:136080090:A:G	rs141744410	A	G	A	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr8	136317316	136317317	chr8:136317317:G:A	rs7814860	G	A	G	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr8	136516879	136516880	chr8:136516880:A:G	rs4909345	A	G	A	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr8	136530139	136530140	chr8:136530140:C:T	rs114965468	C	T	C	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr8	136675880	136675881	chr8:136675881:T:C	rs90190	T	C	T	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr8	136689299	136689300	chr8:136689300:G:T	rs2917896	G	T	G	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr8	136926258	136926259	chr8:136926259:G:T	rs4909614	G	T	G	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr8	137069046	137069047	chr8:137069047:A:G	rs4295697	A	G	A	Hoxd9.mouse_homeodomain_1	4	1	-	7.1462160923678635	4.491169447505284	GCCATAAAC
chr8	137105771	137105772	chr8:137105772:A:G	rs16906764	A	G	A	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr8	137173250	137173251	chr8:137173251:G:A	rs72719644	G	A	G	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr8	137240550	137240551	chr8:137240551:G:T	rs11166696	G	T	G	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr8	137591934	137591935	chr8:137591935:A:G	rs4909374	A	G	G	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr8	137703983	137703984	chr8:137703984:A:G	rs10099986	A	G	G	Hoxd9.mouse_homeodomain_1	6	1	+	7.716978748812629	1.0131528022208975	GACATAAAA
chr8	138326438	138326439	chr8:138326439:G:C	rs1398289	G	C	G	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr8	138468576	138468577	chr8:138468577:C:A	rs13249380	C	A	A	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr8	139242491	139242492	chr8:139242492:G:A	rs35432409	G	A	A	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr8	139265302	139265303	chr8:139265303:C:T	rs16910289	C	T	T	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr8	139363037	139363038	chr8:139363038:C:T	rs10505712	C	T	C	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr8	139375057	139375058	chr8:139375058:C:A	rs7005091	C	A	A	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr8	139564393	139564394	chr8:139564394:A:G	rs2542455	A	G	A	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr8	139745210	139745211	chr8:139745211:G:A	rs13268917	G	A	G	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr8	139835280	139835281	chr8:139835281:T:C	rs1037884	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.027213970992095	6.693135371129603	CACATAAAA
chr8	139996913	139996914	chr8:139996914:T:G	rs112200715	T	G	T	Hoxd9.mouse_homeodomain_1	6	1	-	7.889898683853121	6.1428148690123106	ACCATAAAA
chr8	140153531	140153532	chr8:140153532:C:T	rs76725667	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	-	7.1462160923678635	6.357331058510722	GCCATAAAC
chr8	140171131	140171132	chr8:140171132:A:G	rs4736022	A	G	A	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr8	140491811	140491812	chr8:140491812:T:A	chr8:140491812:T:A	T	A	T	Hoxd9.mouse_homeodomain_1	4	1	+	7.716978748812629	0.875160301482023	GACATAAAA
chr8	140831345	140831346	chr8:140831346:T:A	rs574777645	T	A	T	Hoxd9.mouse_homeodomain_1	4	1	+	8.027213970992095	1.1853955236614904	CACATAAAA
chr8	141053134	141053135	chr8:141053135:C:T	rs7824649	C	T	C	Hoxd9.mouse_homeodomain_1	1	1	+	8.678783717710262	7.363981803377255	GCCATAAAA
chr8	141131385	141131386	chr8:141131386:G:A	rs143461772	G	A	G	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr8	141265434	141265435	chr8:141265435:G:A	rs11994732	G	A	G	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr8	141431488	141431489	chr8:141431489:G:A	rs148325578	G	A	G	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr8	141449563	141449564	chr8:141449564:T:C	rs76573213	T	C	C	Hoxd9.mouse_homeodomain_1	7	1	-	7.091711387329735	0.38788544073800313	CCCATCAAA
chr8	141570339	141570340	chr8:141570340:T:G	rs28574821	T	G	T	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr8	142048084	142048085	chr8:142048085:A:G	rs750520	A	G	G	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr8	142125917	142125918	chr8:142125918:G:C	rs73371586	G	C	G	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr8	142125949	142125950	chr8:142125950:T:C	rs73371587	T	C	C	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr8	142157121	142157122	chr8:142157122:C:T	rs7843340	C	T	T	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr8	142221218	142221219	chr8:142221219:C:A	rs6583604	C	A	C	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr8	142321220	142321221	chr8:142321221:A:G	rs10104625	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.287463081002919	6.953384481140425	CCAATAAAA
chr8	142389061	142389062	chr8:142389062:T:G	rs13278986	T	G	T	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr8	142406262	142406263	chr8:142406263:T:G	rs4301486	T	G	G	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr8	142564637	142564638	chr8:142564638:A:G	rs11167148	A	G	G	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr8	142798865	142798866	chr8:142798866:G:A	rs79126834	G	A	g	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr8	142840387	142840388	chr8:142840388:C:T	rs3750246	C	T	c	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr8	142840395	142840396	chr8:142840396:A:G	rs3750247	A	G	a	Hoxd9.mouse_homeodomain_1	4	1	-	7.241935125048919	4.5868884801863405	CCCATACAA
chr8	142934069	142934070	chr8:142934070:C:T	rs138478606	C	T	t	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr8	143055985	143055986	chr8:143055986:A:G	rs10103088	A	G	G	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr8	143343076	143343077	chr8:143343077:C:A	rs7837655	C	A	A	Hoxd9.mouse_homeodomain_1	2	1	+	7.889898683853121	7.188342824966311	ACCATAAAA
chr8	143355001	143355002	chr8:143355002:A:G	rs2467947	A	G	A	Hoxd9.mouse_homeodomain_1	8	1	+	7.889898683853121	6.423571575367866	ACCATAAAA
chr8	143489670	143489671	chr8:143489671:C:G	rs4874140	C	G	C	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr8	143532225	143532226	chr8:143532226:C:G	rs60183493	C	G	G	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr8	143532228	143532229	chr8:143532229:G:A	rs1242926874	G	A	G	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr8	143790636	143790637	chr8:143790637:G:A	rs534158751	G	A	G	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr8	143790646	143790647	chr8:143790647:G:A	rs184864560	G	A	G	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr8	143842680	143842681	chr8:143842681:C:T	rs116852718	C	T	.	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr8	143913506	143913507	chr8:143913507:G:A	rs60326992	G	A	.	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr8	143915183	143915184	chr8:143915184:A:G	rs1299550852	A	G	.	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr8	144091526	144091527	chr8:144091527:C:T	rs116353027	C	T	C	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr8	144154415	144154416	chr8:144154416:G:A	rs892325141	G	A	g	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr8	144499855	144499856	chr8:144499856:G:A	chr8:144499856:G:A	G	A	G	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr8	144536467	144536468	chr8:144536468:G:C	rs144273207	G	C	G	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr8	144646296	144646297	chr8:144646297:C:A	rs148348179	C	A	C	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr8	144700605	144700606	chr8:144700606:C:G	rs371703059	C	G	C	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr8	144834136	144834137	chr8:144834137:C:T	rs113674134	C	T	C	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr8	145028412	145028413	chr8:145028413:A:G	rs112233828	A	G	-	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr8	145033362	145033363	chr8:145033363:A:G	rs12542824	A	G	a	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr8	145062679	145062680	chr8:145062680:T:C	rs7008265	T	C	.	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr8	145063410	145063411	chr8:145063411:T:C	rs6599563	T	C	.	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr9	178430	178431	chr9:178431:C:T	rs2992847	C	T	.	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr9	325298	325299	chr9:325299:T:C	rs10813612	T	C	T	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr9	346472	346473	chr9:346473:G:A	rs72701297	G	A	G	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr9	346482	346483	chr9:346483:T:C	rs10814023	T	C	C	Hoxd9.mouse_homeodomain_1	3	1	-	8.409487817756228	7.075409217893736	CCCATTAAA
chr9	346483	346484	chr9:346484:G:T	rs10758219	G	T	T	Hoxd9.mouse_homeodomain_1	2	1	-	8.409487817756228	7.707931958869418	CCCATTAAA
chr9	590453	590454	chr9:590454:T:C	rs2642006	T	C	T	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr9	629467	629468	chr9:629468:C:T	rs10115825	C	T	T	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr9	720178	720179	chr9:720179:T:C	rs7043585	T	C	C	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr9	738603	738604	chr9:738604:G:A	rs142417645	G	A	G	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr9	738636	738637	chr9:738637:A:G	rs59681432	A	G	A	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr9	742883	742884	chr9:742884:A:G	rs12377726	A	G	G	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr9	900000	900001	chr9:900001:G:C	chr9:900001:G:C	G	C	G	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr9	908605	908606	chr9:908606:C:T	rs1033831	C	T	T	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr9	943069	943070	chr9:943070:G:A	rs10977669	G	A	A	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr9	1014563	1014564	chr9:1014564:G:A	rs72703205	G	A	G	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr9	1014659	1014660	chr9:1014660:C:G	rs72703206	C	G	C	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr9	1032566	1032567	chr9:1032567:G:A	rs1016565	G	A	A	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr9	1142652	1142653	chr9:1142653:G:A	rs2375254	G	A	G	Hoxd9.mouse_homeodomain_1	0	1	+	7.716978748812629	6.928093714955487	GACATAAAA
chr9	1270675	1270676	chr9:1270676:T:C	rs882092	T	C	T	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr9	1272723	1272724	chr9:1272724:C:G	rs1337624	C	G	C	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr9	1535066	1535067	chr9:1535067:C:A	rs1796889	C	A	C	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr9	1567275	1567276	chr9:1567276:T:C	rs12551843	T	C	T	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr9	1757153	1757154	chr9:1757154:T:A	rs4373567	T	A	T	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr9	1758920	1758921	chr9:1758921:A:T	rs73640740	A	T	T	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr9	1758921	1758922	chr9:1758922:A:C	rs73640741	A	C	C	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr9	1828846	1828847	chr9:1828847:T:C	rs10810924	T	C	C	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr9	1871923	1871924	chr9:1871924:C:G	rs143446422	C	G	C	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr9	2018147	2018148	chr9:2018148:A:G	rs150956964	A	G	A	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr9	2180509	2180510	chr9:2180510:A:G	rs10965112	A	G	A	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr9	2180535	2180536	chr9:2180536:T:C	rs10757235	T	C	C	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr9	2241784	2241785	chr9:2241785:G:C	rs138659811	G	C	G	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr9	2330284	2330285	chr9:2330285:C:T	rs10122446	C	T	T	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr9	2338935	2338936	chr9:2338936:C:A	rs7018661	C	A	C	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr9	2377287	2377288	chr9:2377288:A:G	rs7847031	A	G	T	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr9	2385674	2385675	chr9:2385675:T:C	rs10811967	T	C	T	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr9	2385676	2385677	chr9:2385677:G:C	rs7872112	G	C	G	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr9	2385824	2385825	chr9:2385825:G:A	rs138545083	G	A	G	Hoxd9.mouse_homeodomain_1	1	1	-	7.9772278588234515	6.662425944490444	GCAATAAAA
chr9	2390377	2390378	chr9:2390378:T:C	rs10732343	T	C	C	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr9	2396637	2396638	chr9:2396638:T:C	rs6475762	T	C	C	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr9	2396672	2396673	chr9:2396673:A:C	rs7025116	A	C	C	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr9	2411571	2411572	chr9:2411572:T:C	rs7025994	T	C	T	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr9	2568853	2568854	chr9:2568854:G:C	rs145452844	G	C	G	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr9	3167891	3167892	chr9:3167892:C:T	rs182738202	C	T	C	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr9	3245604	3245605	chr9:3245605:T:G	rs589085	T	G	T	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr9	3285880	3285881	chr9:3285881:G:T	rs995539692	G	T	G	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr9	3746245	3746246	chr9:3746246:A:G	rs4147121	A	G	A	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr9	3746412	3746413	chr9:3746413:C:A	rs4147122	C	A	A	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr9	3763951	3763952	chr9:3763952:C:T	rs60069291	C	T	.	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr9	3822665	3822666	chr9:3822666:C:A	rs62521381	C	A	C	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr9	3884878	3884879	chr9:3884879:A:G	rs12235312	A	G	G	Hoxd9.mouse_homeodomain_1	1	1	+	8.027213970992095	2.5794857111073646	CACATAAAA
chr9	4039567	4039568	chr9:4039568:A:G	rs10974297	A	G	A	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr9	4063330	4063331	chr9:4063331:A:G	rs1025547222	A	G	A	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr9	4288096	4288097	chr9:4288097:A:C	rs749218066	A	C	A	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr9	4530687	4530688	chr9:4530688:G:A	rs74810367	G	A	G	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr9	4560347	4560348	chr9:4560348:C:T	rs9886720	C	T	t	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr9	4563315	4563316	chr9:4563316:A:G	rs6476878	A	G	G	Hoxd9.mouse_homeodomain_1	0	1	+	7.889898683853121	8.678783717710262	ACCATAAAA
chr9	4706213	4706214	chr9:4706214:C:T	rs2181341	C	T	C	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr9	5043766	5043767	chr9:5043767:A:T	rs58345215	A	T	A	Hoxd9.mouse_homeodomain_1	5	1	+	7.9772278588234515	7.39769673668995	GCAATAAAA
chr9	5336983	5336984	chr9:5336984:C:G	rs1885498	C	G	G	Hoxd9.mouse_homeodomain_1	1	1	+	7.9772278588234515	1.5676946300410868	GCAATAAAA
chr9	5425186	5425187	chr9:5425187:T:C	rs370181983	T	C	T	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr9	5442721	5442722	chr9:5442722:T:C	rs80100739	T	C	A	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr9	5490521	5490522	chr9:5490522:C:T	rs944141	C	T	C	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr9	5627145	5627146	chr9:5627146:T:C	chr9:5627146:T:C	T	C	T	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr9	6201135	6201136	chr9:6201136:G:C	rs10046872	G	C	C	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr9	6226675	6226676	chr9:6226676:C:T	rs1323059587	C	T	C	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr9	6414478	6414479	chr9:6414479:C:A	rs41313446	C	A	C	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr9	6575975	6575976	chr9:6575976:A:T	rs10975655	A	T	T	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr9	6680593	6680594	chr9:6680594:C:T	rs59768269	C	T	C	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr9	6695471	6695472	chr9:6695472:T:C	rs1094039	T	C	T	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr9	6791732	6791733	chr9:6791733:A:T	rs10283920	A	T	A	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr9	6803075	6803076	chr9:6803076:G:A	rs62567989	G	A	G	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr9	6806716	6806717	chr9:6806717:G:A	rs10975837	G	A	G	Hoxd9.mouse_homeodomain_1	5	1	-	7.091711387329735	8.409487817756228	CCCATCAAA
chr9	6842686	6842687	chr9:6842687:T:G	rs6477116	T	G	G	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr9	6908194	6908195	chr9:6908195:T:G	rs7021011	T	G	T	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr9	6929893	6929894	chr9:6929894:A:C	rs11788849	A	C	C	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr9	6947955	6947956	chr9:6947956:G:A	rs11794838	G	A	G	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr9	7073764	7073765	chr9:7073765:A:C	rs16925288	A	C	A	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr9	7343187	7343188	chr9:7343188:C:T	rs1952178	C	T	C	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr9	7375203	7375204	chr9:7375204:T:C	rs114186128	T	C	C	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr9	7402666	7402667	chr9:7402667:G:C	rs2986280	G	C	C	Hoxd9.mouse_homeodomain_1	3	1	+	7.075409217893736	1.833979713552747	CCCGTTAAA
chr9	7561989	7561990	chr9:7561990:C:G	rs10976401	C	G	C	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr9	7798517	7798518	chr9:7798518:G:C	rs4742410	G	C	C	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr9	7896307	7896308	chr9:7896308:T:C	rs10976649	T	C	T	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr9	8074896	8074897	chr9:8074897:G:A	rs10815746	G	A	G	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr9	8234234	8234235	chr9:8234235:A:G	rs1768574	A	G	A	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr9	8234238	8234239	chr9:8234239:C:T	rs1781269	C	T	C	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr9	8381850	8381851	chr9:8381851:C:T	rs7031533	C	T	T	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr9	8431240	8431241	chr9:8431241:G:A	rs148158407	G	A	G	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr9	8621567	8621568	chr9:8621568:C:G	rs10511505	C	G	C	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr9	8695012	8695013	chr9:8695013:G:A	rs113598702	G	A	G	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr9	8816587	8816588	chr9:8816588:G:C	rs12342324	G	C	G	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr9	8847949	8847950	chr9:8847950:C:T	rs72704324	C	T	C	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr9	8856907	8856908	chr9:8856908:C:T	rs751372	C	T	T	Hoxd9.mouse_homeodomain_1	0	1	+	8.027213970992095	6.132666665683155	CACATAAAA
chr9	8923380	8923381	chr9:8923381:C:T	rs16928627	C	T	C	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr9	9187450	9187451	chr9:9187451:T:C	rs10977554	T	C	T	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr9	9258144	9258145	chr9:9258145:A:C	rs10977621	A	C	A	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr9	9469574	9469575	chr9:9469575:C:G	rs16929549	C	G	C	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr9	9707143	9707144	chr9:9707144:G:A	rs10739199	G	A	A	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr9	10060363	10060364	chr9:10060364:C:T	rs1704031	C	T	C	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr9	10062971	10062972	chr9:10062972:T:A	rs396845	T	A	T	Hoxd9.mouse_homeodomain_1	6	1	-	7.9772278588234515	5.087812088792866	GCAATAAAA
chr9	10144326	10144327	chr9:10144327:A:C	rs72696918	A	C	A	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr9	10265658	10265659	chr9:10265659:C:T	rs12554798	C	T	C	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr9	10274057	10274058	chr9:10274058:G:T	rs10809055	G	T	G	Hoxd9.mouse_homeodomain_1	1	1	-	8.099252595576761	7.137447626679127	GCCATTAAA
chr9	10929048	10929049	chr9:10929049:G:C	rs7867318	G	C	G	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr9	10942879	10942880	chr9:10942880:A:T	rs55731459	A	T	A	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr9	11039287	11039288	chr9:11039288:A:G	rs113000588	A	G	A	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr9	11039319	11039320	chr9:11039320:A:T	rs56235824	A	T	A	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr9	11080185	11080186	chr9:11080186:A:T	rs6474629	A	T	A	Hoxd9.mouse_homeodomain_1	8	1	+	7.241935125048919	4.309422000282851	CCCATACAA
chr9	11352729	11352730	chr9:11352730:C:T	rs1335449	C	T	T	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr9	11352765	11352766	chr9:11352766:G:A	chr9:11352766:G:A	G	A	G	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr9	11431916	11431917	chr9:11431917:G:A	rs2382290	G	A	G	Hoxd9.mouse_homeodomain_1	8	1	+	7.212456609225008	8.678783717710262	GCCATAAAG
chr9	11471765	11471766	chr9:11471766:C:T	rs10756254	C	T	T	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr9	11472475	11472476	chr9:11472476:C:G	rs10959845	C	G	C	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr9	12315912	12315913	chr9:12315913:A:G	rs73412992	A	G	A	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr9	12738139	12738140	chr9:12738140:G:C	rs1326781	G	C	C	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr9	12880937	12880938	chr9:12880938:C:T	rs16929768	C	T	C	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr9	13513692	13513693	chr9:13513693:T:A	chr9:13513693:T:A	T	A	T	Hoxd9.mouse_homeodomain_1	8	1	-	8.678783717710262	5.746270592944195	GCCATAAAA
chr9	13577348	13577349	chr9:13577349:C:T	rs76811443	C	T	C	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr9	13899200	13899201	chr9:13899201:C:G	rs7874645	C	G	G	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr9	13899209	13899210	chr9:13899210:C:T	rs7874646	C	T	T	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr9	13941635	13941636	chr9:13941636:C:T	rs117419276	C	T	C	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr9	13979601	13979602	chr9:13979602:C:T	rs16931181	C	T	C	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr9	14055973	14055974	chr9:14055974:T:C	rs12685927	T	C	T	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr9	14194011	14194012	chr9:14194012:A:C	rs145461910	A	C	A	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr9	14209427	14209428	chr9:14209428:G:C	rs76819450	G	C	G	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr9	14238470	14238471	chr9:14238471:T:C	rs35128680	T	C	T	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr9	14308111	14308112	chr9:14308112:G:C	rs535835601	G	C	G	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr9	14440401	14440402	chr9:14440402:T:C	rs303728	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	7.889898683853121	6.555820083990628	ACCATAAAA
chr9	14770826	14770827	chr9:14770827:T:C	rs7860370	T	C	T	Hoxd9.mouse_homeodomain_1	4	1	+	7.716978748812629	5.061932103950051	GACATAAAA
chr9	14925026	14925027	chr9:14925027:A:G	rs907362049	A	G	A	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr9	14989878	14989879	chr9:14989879:T:C	rs10810310	T	C	T	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr9	14989891	14989892	chr9:14989892:T:A	rs7028104	T	A	T	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr9	15308725	15308726	chr9:15308726:A:G	chr9:15308726:A:G	A	G	A	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr9	15356920	15356921	chr9:15356921:C:T	rs12004877	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	+	6.943160709270972	5.048613403962031	CCCATTAAG
chr9	15389454	15389455	chr9:15389455:C:T	rs2490854	C	T	T	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr9	16040919	16040920	chr9:16040920:C:G	rs73415878	C	G	C	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr9	16045828	16045829	chr9:16045829:A:G	rs4741561	A	G	A	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr9	16068773	16068774	chr9:16068774:G:A	rs10120960	G	A	a	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr9	16070481	16070482	chr9:16070482:G:A	rs73645252	G	A	G	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr9	16150499	16150500	chr9:16150500:A:G	rs7872685	A	G	A	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr9	16294577	16294578	chr9:16294578:T:C	rs11791494	T	C	T	Hoxd9.mouse_homeodomain_1	5	1	-	7.241935125048919	0.867745406802363	CCCATACAA
chr9	16368789	16368790	chr9:16368790:A:C	rs10113982	A	C	A	Hoxd9.mouse_homeodomain_1	7	1	+	7.522691831404475	4.633276061373889	CCCATAAAG
chr9	16416996	16416997	chr9:16416997:T:C	rs1999032	T	C	C	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr9	16515564	16515565	chr9:16515565:G:C	rs7042044	G	C	G	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr9	16555981	16555982	chr9:16555982:A:G	rs28714603	A	G	A	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr9	16559928	16559929	chr9:16559929:T:C	rs546998579	T	C	T	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr9	16657541	16657542	chr9:16657542:G:C	rs10962522	G	C	G	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr9	16705318	16705319	chr9:16705319:G:A	rs952811305	G	A	G	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr9	16954164	16954165	chr9:16954165:G:A	rs7849300	G	A	g	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr9	17040821	17040822	chr9:17040822:G:A	rs79439080	G	A	G	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr9	17134375	17134376	chr9:17134376:A:C	rs114943410	A	C	A	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr9	17397382	17397383	chr9:17397383:G:T	rs10756879	G	T	T	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr9	17397550	17397551	chr9:17397551:A:G	rs7874945	A	G	G	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr9	17650658	17650659	chr9:17650659:G:C	rs7024337	G	C	C	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr9	17987409	17987410	chr9:17987410:C:T	rs2891117	C	T	T	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr9	18111647	18111648	chr9:18111648:C:A	rs569644	C	A	A	Hoxd9.mouse_homeodomain_1	1	1	+	7.1462160923678635	6.184411123470229	GCCATAAAC
chr9	18274880	18274881	chr9:18274881:A:G	rs1233397014	A	G	A	Hoxd9.mouse_homeodomain_1	5	1	+	8.287463081002919	1.9132733627563638	CCAATAAAA
chr9	18394101	18394102	chr9:18394102:C:T	rs72686885	C	T	C	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr9	18394106	18394107	chr9:18394107:C:A	rs150445768	C	A	C	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr9	18423033	18423034	chr9:18423034:A:T	rs7852203	A	T	A	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr9	18470727	18470728	chr9:18470728:T:C	rs17206286	T	C	T	Hoxd9.mouse_homeodomain_1	4	1	+	7.522691831404475	4.867645186541897	CCCATAAAG
chr9	18676164	18676165	chr9:18676165:A:G	rs776764	A	G	A	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr9	18745135	18745136	chr9:18745136:G:A	rs541686	G	A	A	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr9	18926537	18926538	chr9:18926538:T:C	rs4977464	T	C	T	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr9	18943018	18943019	chr9:18943019:T:C	rs73648815	T	C	C	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr9	19119187	19119188	chr9:19119188:G:A	rs10963970	G	A	G	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr9	19161240	19161241	chr9:19161241:G:A	rs10964015	G	A	G	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr9	19208315	19208316	chr9:19208316:G:T	rs12685321	G	T	G	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr9	19284909	19284910	chr9:19284910:T:C	rs10811164	T	C	T	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr9	19379325	19379326	chr9:19379326:C:A	rs567486924	C	A	C	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr9	19416236	19416237	chr9:19416237:A:G	rs55901126	A	G	a	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr9	19759309	19759310	chr9:19759310:T:C	rs1359822	T	C	T	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr9	19759336	19759337	chr9:19759337:A:G	rs572245190	A	G	A	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr9	19797851	19797852	chr9:19797852:G:A	rs1327413	G	A	G	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr9	19913351	19913352	chr9:19913352:C:G	rs72692011	C	G	C	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr9	19922415	19922416	chr9:19922416:T:C	rs143557825	T	C	T	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr9	19941356	19941357	chr9:19941357:C:A	rs17244095	C	A	C	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr9	20049775	20049776	chr9:20049776:T:A	rs11789037	T	A	T	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr9	20206084	20206085	chr9:20206085:C:A	rs2809149	C	A	C	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr9	20443186	20443187	chr9:20443187:C:T	rs907977467	C	T	C	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr9	20848483	20848484	chr9:20848484:A:G	rs59533952	A	G	A	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr9	20898642	20898643	chr9:20898643:T:G	rs10964749	T	G	T	Hoxd9.mouse_homeodomain_1	5	1	-	8.678783717710262	6.781476165150267	GCCATAAAA
chr9	21095633	21095634	chr9:21095634:T:C	rs10964832	T	C	T	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr9	21120132	21120133	chr9:21120133:A:G	rs9886767	A	G	A	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr9	21502923	21502924	chr9:21502924:C:T	rs16938435	C	T	C	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr9	21771555	21771556	chr9:21771556:T:C	rs192237553	T	C	T	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr9	21780251	21780252	chr9:21780252:A:G	rs7846749	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	7.45645131454733	6.122372714684838	CCCATAAAC
chr9	21788656	21788657	chr9:21788657:C:T	rs10965133	C	T	C	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr9	21797186	21797187	chr9:21797187:G:A	rs10965139	G	A	G	Hoxd9.mouse_homeodomain_1	2	1	-	7.34470511784777	0.8572646602241328	GCCGTAAAA
chr9	21836585	21836586	chr9:21836586:A:G	rs16938571	A	G	A	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr9	21836587	21836588	chr9:21836588:G:A	rs765656911	G	A	G	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr9	21965232	21965233	chr9:21965233:C:G	rs2188127	C	G	C	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr9	22513285	22513286	chr9:22513286:A:G	rs72697750	A	G	A	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr9	22535878	22535879	chr9:22535879:C:A	rs62572325	C	A	t	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr9	23811904	23811905	chr9:23811905:G:T	rs3793601	G	T	G	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr9	23888421	23888422	chr9:23888422:G:A	rs540941	G	A	G	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr9	24969094	24969095	chr9:24969095:A:G	rs146224641	A	G	A	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr9	25241048	25241049	chr9:25241049:C:G	rs10966814	C	G	G	Hoxd9.mouse_homeodomain_1	1	1	+	7.9772278588234515	1.5676946300410868	GCAATAAAA
chr9	25591470	25591471	chr9:25591471:T:A	rs10812275	T	A	T	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr9	25603440	25603441	chr9:25603441:T:C	rs10738725	T	C	C	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr9	26132739	26132740	chr9:26132740:T:G	chr9:26132740:T:G	T	G	t	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr9	26612596	26612597	chr9:26612597:C:A	rs62542713	C	A	C	Hoxd9.mouse_homeodomain_1	1	1	+	8.099252595576761	7.137447626679127	GCCATTAAA
chr9	26788018	26788019	chr9:26788019:G:T	rs17693864	G	T	G	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr9	26893732	26893733	chr9:26893733:C:T	rs7038218	C	T	T	Hoxd9.mouse_homeodomain_1	0	1	+	8.027213970992095	6.132666665683155	CACATAAAA
chr9	27154420	27154421	chr9:27154421:A:G	rs480723	A	G	A	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr9	27341207	27341208	chr9:27341208:G:C	rs78873511	G	C	G	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr9	27342058	27342059	chr9:27342059:G:A	rs12376262	G	A	A	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr9	27584900	27584901	chr9:27584901:T:C	rs10757670	T	C	T	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr9	27659160	27659161	chr9:27659161:C:A	rs7858681	C	A	A	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr9	28249657	28249658	chr9:28249658:T:C	rs12551839	T	C	T	Hoxd9.mouse_homeodomain_1	5	1	-	8.287463081002919	1.9132733627563638	CCAATAAAA
chr9	29132165	29132166	chr9:29132166:C:T	rs1418358	C	T	T	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr9	29264767	29264768	chr9:29264768:G:C	rs10120092	G	C	G	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr9	29326211	29326212	chr9:29326212:T:G	rs61702085	T	G	T	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr9	29404791	29404792	chr9:29404792:T:A	rs944596	T	A	A	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr9	29440075	29440076	chr9:29440076:T:G	rs12379607	T	G	T	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr9	29440113	29440114	chr9:29440114:T:A	rs10969157	T	A	T	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr9	29778581	29778582	chr9:29778582:T:C	rs1832052	T	C	C	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr9	30344441	30344442	chr9:30344442:T:C	rs13283056	T	C	t	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr9	30855666	30855667	chr9:30855667:T:C	rs1034157	T	C	C	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr9	31698077	31698078	chr9:31698078:A:C	rs62551675	A	C	A	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr9	31764082	31764083	chr9:31764083:C:T	rs74395089	C	T	C	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr9	31774738	31774739	chr9:31774739:T:G	rs7031669	T	G	T	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr9	31774743	31774744	chr9:31774744:C:T	rs75049619	C	T	c	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr9	32069595	32069596	chr9:32069596:G:A	rs1905006	G	A	A	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr9	32337853	32337854	chr9:32337854:T:C	rs9792594	T	C	T	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr9	32555050	32555051	chr9:32555051:C:A	rs6476369	C	A	A	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr9	32930631	32930632	chr9:32930632:G:T	rs1981009	G	T	T	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr9	33024364	33024365	chr9:33024365:A:G	chr9:33024365:A:G	A	G	A	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr9	33024388	33024389	chr9:33024389:T:C	chr9:33024389:T:C	T	C	t	Hoxd9.mouse_homeodomain_1	5	1	+	6.943160709270972	5.6253842788444794	CCCATTAAG
chr9	33158868	33158869	chr9:33158869:T:C	chr9:33158869:T:C	T	C	T	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr9	33163272	33163273	chr9:33163273:A:G	rs1328898	A	G	a	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr9	33163299	33163300	chr9:33163300:C:T	rs3780481	C	T	C	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr9	33228190	33228191	chr9:33228191:C:T	rs830574	C	T	C	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr9	33621446	33621447	chr9:33621447:A:G	rs112989614	A	G	.	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr9	33657526	33657527	chr9:33657527:T:C	chr9:33657527:T:C	T	C	.	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr9	33678145	33678146	chr9:33678146:C:A	rs855460	C	A	.	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr9	33678414	33678415	chr9:33678415:A:C	rs7861919	A	C	.	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr9	33816953	33816954	chr9:33816954:G:A	chr9:33816954:G:A	G	A	G	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr9	33943173	33943174	chr9:33943174:A:C	rs62555936	A	C	A	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr9	34328753	34328754	chr9:34328754:C:G	rs567353668	C	G	C	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr9	34346283	34346284	chr9:34346284:C:T	rs61573237	C	T	C	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr9	34376230	34376231	chr9:34376231:T:G	rs577791813	T	G	T	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr9	34459026	34459027	chr9:34459027:G:T	rs11547035	G	T	G	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr9	34477191	34477192	chr9:34477192:A:T	rs10738929	A	T	a	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr9	34926930	34926931	chr9:34926931:A:C	rs1334756	A	C	C	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr9	35070337	35070338	chr9:35070338:T:C	rs185509438	T	C	T	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr9	35482151	35482152	chr9:35482152:C:T	rs10972487	C	T	C	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr9	35599649	35599650	chr9:35599650:G:A	rs72725087	G	A	G	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr9	35795523	35795524	chr9:35795524:A:G	rs7031237	A	G	G	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr9	35843005	35843006	chr9:35843006:C:G	rs16932706	C	G	C	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr9	35902990	35902991	chr9:35902991:G:A	rs10429457	G	A	G	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr9	36019491	36019492	chr9:36019492:A:C	rs76414757	A	C	A	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr9	36074181	36074182	chr9:36074182:C:T	rs4144607	C	T	T	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr9	36320099	36320100	chr9:36320100:C:T	rs139367192	C	T	C	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr9	36725672	36725673	chr9:36725673:C:T	rs7027081	C	T	C	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr9	36725675	36725676	chr9:36725676:C:T	rs7027082	C	T	T	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr9	36813282	36813283	chr9:36813283:A:G	rs111294515	A	G	A	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr9	36862183	36862184	chr9:36862184:A:T	rs73648155	A	T	A	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr9	36864121	36864122	chr9:36864122:A:G	rs4289895	A	G	A	Hoxd9.mouse_homeodomain_1	2	1	+	8.287463081002919	5.5210272824374	CCAATAAAA
chr9	36866663	36866664	chr9:36866664:C:T	rs75377918	C	T	C	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr9	37124616	37124617	chr9:37124617:A:G	rs7046722	A	G	a	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr9	37149982	37149983	chr9:37149983:T:A	rs79679901	T	A	T	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr9	37497531	37497532	chr9:37497532:T:G	rs55663423	T	G	t	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr9	37575957	37575958	chr9:37575958:G:A	rs72739690	G	A	G	Hoxd9.mouse_homeodomain_1	1	1	-	7.654940340027237	6.34013842569423	CCCGTAAAA
chr9	37727385	37727386	chr9:37727386:A:G	rs12554587	A	G	A	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr9	37731179	37731180	chr9:37731180:T:G	rs2274323	T	G	T	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr9	37988649	37988650	chr9:37988650:T:C	rs2244006	T	C	C	Hoxd9.mouse_homeodomain_1	1	1	-	8.027213970992095	2.5794857111073646	CACATAAAA
chr9	37998831	37998832	chr9:37998832:T:G	rs7856252	T	G	T	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr9	38015648	38015649	chr9:38015649:C:G	rs7047952	C	G	G	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr9	38025900	38025901	chr9:38025901:G:C	rs7038167	G	C	G	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr9	38108959	38108960	chr9:38108960:C:T	rs10814656	C	T	C	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr9	38135616	38135617	chr9:38135617:A:C	rs885432	A	C	A	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr9	38263798	38263799	chr9:38263799:C:G	rs181463835	C	G	C	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr9	38343508	38343509	chr9:38343509:A:T	rs4878786	A	T	A	Hoxd9.mouse_homeodomain_1	7	1	+	7.091711387329735	5.344627572488923	CCCATCAAA
chr9	38390939	38390940	chr9:38390940:C:T	rs10738997	C	T	T	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr9	38672763	38672764	chr9:38672764:C:T	rs189349382	C	T	C	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr9	38675467	38675468	chr9:38675468:G:A	rs7039377	G	A	A	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr9	38720629	38720630	chr9:38720630:C:T	rs12682690	C	T	C	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr9	38925715	38925716	chr9:38925716:C:G	rs62568411	C	G	c	Hoxd9.mouse_homeodomain_1	2	1	+	7.075409217893736	3.607417560441405	CCCGTTAAA
chr9	39028345	39028346	chr9:39028346:G:C	rs1185173306	G	C	g	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr9	39037818	39037819	chr9:39037819:T:G	rs62567335	T	G	T	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr9	40130298	40130299	chr9:40130299:G:C	rs201855967	G	C	g	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr9	40882477	40882478	chr9:40882478:G:C	rs10907894	G	C	.	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr9	40935570	40935571	chr9:40935571:G:A	rs1260361194	G	A	.	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr9	40935576	40935577	chr9:40935577:G:A	rs1312962314	G	A	.	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr9	41654150	41654151	chr9:41654151:G:C	rs530666	G	C	A	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr9	41923877	41923878	chr9:41923878:C:T	rs747621437	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	-	7.9772278588234515	7.188342824966311	GCAATAAAA
chr9	42282673	42282674	chr9:42282674:C:A	rs1178576214	C	A	C	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr9	42359374	42359375	chr9:42359375:T:G	rs1438314909	T	G	T	Hoxd9.mouse_homeodomain_1	4	1	+	8.678783717710262	1.8369652703796566	GCCATAAAA
chr9	43185572	43185573	chr9:43185573:C:G	rs1196590283	C	G	.	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr9	43188086	43188087	chr9:43188087:A:G	rs1241340010	A	G	.	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr9	61868084	61868085	chr9:61868085:A:C	rs2117673	A	C	a	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr9	62814657	62814658	chr9:62814658:C:T	rs7026273	C	T	.	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr9	62823552	62823553	chr9:62823553:A:G	rs1477463287	A	G	.	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr9	64499361	64499362	chr9:64499362:G:A	rs147848273	G	A	g	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr9	64878334	64878335	chr9:64878335:G:A	rs199839919	G	A	G	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr9	65052276	65052277	chr9:65052277:T:C	rs891499405	T	C	.	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr9	65424362	65424363	chr9:65424363:C:T	rs1255826105	C	T	.	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr9	65676532	65676533	chr9:65676533:C:G	rs75002728	C	G	.	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr9	66888737	66888738	chr9:66888738:T:C	rs71508281	T	C	N	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr9	67412064	67412065	chr9:67412065:A:T	rs1233002242	A	T	N	Hoxd9.mouse_homeodomain_1	4	1	-	7.45645131454733	0.614632867216724	CCCATAAAC
chr9	68428095	68428096	chr9:68428096:C:T	rs77288601	C	T	C	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr9	68695194	68695195	chr9:68695195:T:C	rs11143424	T	C	T	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr9	68708952	68708953	chr9:68708953:G:A	rs112019670	G	A	G	Hoxd9.mouse_homeodomain_1	0	1	-	7.45645131454733	5.561904009238388	CCCATAAAC
chr9	68731513	68731514	chr9:68731514:C:T	rs10869253	C	T	C	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr9	68770205	68770206	chr9:68770206:C:T	rs80305461	C	T	C	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr9	68934303	68934304	chr9:68934304:C:T	rs72722034	C	T	C	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr9	69120964	69120965	chr9:69120965:C:T	rs77649353	C	T	C	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr9	69191213	69191214	chr9:69191214:C:T	rs2309425	C	T	C	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr9	69204855	69204856	chr9:69204856:T:C	rs73649624	T	C	T	Hoxd9.mouse_homeodomain_1	8	1	-	8.027213970992095	6.560886862506841	CACATAAAA
chr9	69548585	69548586	chr9:69548586:G:A	rs11789317	G	A	G	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr9	69751431	69751432	chr9:69751432:T:C	rs11140138	T	C	T	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr9	69810342	69810343	chr9:69810343:T:C	rs72723211	T	C	T	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr9	69867163	69867164	chr9:69867164:G:T	rs10122385	G	T	G	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr9	69885654	69885655	chr9:69885655:C:G	rs78649342	C	G	C	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr9	69885692	69885693	chr9:69885693:T:C	rs10115144	T	C	T	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr9	70004220	70004221	chr9:70004221:T:G	chr9:70004221:T:G	T	G	T	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr9	70004224	70004225	chr9:70004225:A:G	chr9:70004225:A:G	A	G	A	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr9	70246776	70246777	chr9:70246777:T:G	rs3858107	T	G	T	Hoxd9.mouse_homeodomain_1	7	1	-	8.027213970992095	5.137798200961511	CACATAAAA
chr9	70285431	70285432	chr9:70285432:G:A	rs7866471	G	A	T	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr9	70285442	70285443	chr9:70285443:A:G	rs77992467	A	G	A	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr9	70455815	70455816	chr9:70455816:G:T	rs79231716	G	T	G	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr9	70554819	70554820	chr9:70554820:A:G	rs4744603	A	G	A	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr9	70850475	70850476	chr9:70850476:G:T	rs73647171	G	T	G	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr9	70952223	70952224	chr9:70952224:A:G	rs13284434	A	G	A	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr9	70978774	70978775	chr9:70978775:A:T	rs2909294	A	T	A	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr9	70983636	70983637	chr9:70983637:A:T	rs1558927	A	T	A	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr9	71065944	71065945	chr9:71065945:C:T	rs73480123	C	T	C	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr9	71248876	71248877	chr9:71248877:C:T	rs10746867	C	T	T	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr9	71253238	71253239	chr9:71253239:A:T	rs4744627	A	T	T	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr9	71269574	71269575	chr9:71269575:C:A	rs2860097	C	A	A	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr9	71446189	71446190	chr9:71446190:G:A	rs7036129	G	A	G	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr9	71681328	71681329	chr9:71681329:T:A	rs7021291	T	A	T	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr9	71692523	71692524	chr9:71692524:G:A	rs13295610	G	A	g	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr9	72006651	72006652	chr9:72006652:C:T	rs12682751	C	T	C	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr9	72138942	72138943	chr9:72138943:T:C	rs12337244	T	C	C	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr9	72434297	72434298	chr9:72434298:C:A	rs17057731	C	A	C	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr9	72458681	72458682	chr9:72458682:T:C	rs1105115	T	C	C	Hoxd9.mouse_homeodomain_1	1	1	-	8.027213970992095	2.5794857111073646	CACATAAAA
chr9	72589775	72589776	chr9:72589776:C:T	rs115544978	C	T	C	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr9	72603302	72603303	chr9:72603303:C:G	rs114158162	C	G	C	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr9	72886587	72886588	chr9:72886588:T:C	rs348467	T	C	C	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr9	72937747	72937748	chr9:72937748:A:C	chr9:72937748:A:C	A	C	A	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr9	72937758	72937759	chr9:72937759:T:C	rs8187898	T	C	T	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr9	73014043	73014044	chr9:73014044:G:A	rs7853400	G	A	A	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr9	73082452	73082453	chr9:73082453:G:A	rs74856225	G	A	G	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr9	73211399	73211400	chr9:73211400:T:A	rs7030234	T	A	T	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr9	73242489	73242490	chr9:73242490:G:T	rs7850771	G	T	T	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr9	73572559	73572560	chr9:73572560:A:G	rs17659570	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.287463081002919	6.953384481140425	CCAATAAAA
chr9	73594283	73594284	chr9:73594284:A:G	rs11143629	A	G	A	Hoxd9.mouse_homeodomain_1	5	1	+	7.9772278588234515	1.603038140576896	GCAATAAAA
chr9	73635706	73635707	chr9:73635707:T:C	rs2310399	T	C	T	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr9	75240735	75240736	chr9:75240736:T:G	rs7350256	T	G	T	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr9	75396824	75396825	chr9:75396825:G:A	rs75718389	G	A	G	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr9	75483418	75483419	chr9:75483419:A:G	rs71509821	A	G	A	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr9	75535409	75535410	chr9:75535410:C:A	rs35111263	C	A	C	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr9	75649377	75649378	chr9:75649378:T:C	rs12346159	T	C	C	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr9	76092945	76092946	chr9:76092946:C:T	rs1029034	C	T	T	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr9	76200481	76200482	chr9:76200482:G:A	rs12236539	G	A	A	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr9	76323126	76323127	chr9:76323127:G:A	rs2495207	G	A	G	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr9	76586447	76586448	chr9:76586448:A:G	chr9:76586448:A:G	A	G	A	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr9	76634844	76634845	chr9:76634845:T:A	rs7045505	T	A	T	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr9	76643478	76643479	chr9:76643479:T:C	rs478699	T	C	T	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr9	76643502	76643503	chr9:76643503:G:C	rs478792	G	C	G	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr9	76658524	76658525	chr9:76658525:T:C	rs11144997	T	C	T	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr9	76692363	76692364	chr9:76692364:A:G	rs7029812	A	G	a	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr9	76799657	76799658	chr9:76799658:C:A	rs11145075	C	A	C	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr9	77426284	77426285	chr9:77426285:C:G	rs12352871	C	G	G	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr9	77471273	77471274	chr9:77471274:C:T	rs7875530	C	T	T	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr9	77536132	77536133	chr9:77536133:T:C	rs10869937	T	C	T	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr9	77690311	77690312	chr9:77690312:G:T	rs1855652	G	T	T	Hoxd9.mouse_homeodomain_1	6	1	-	7.241935125048919	8.98901893988973	CCCATACAA
chr9	77820514	77820515	chr9:77820515:A:G	rs1410558	A	G	A	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr9	77827475	77827476	chr9:77827476:T:C	rs756485	T	C	C	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr9	78119278	78119279	chr9:78119279:T:A	rs562213226	T	A	T	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr9	78408706	78408707	chr9:78408707:C:T	rs10441781	C	T	C	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr9	78495412	78495413	chr9:78495413:G:A	rs2998691	G	A	G	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr9	78525995	78525996	chr9:78525996:T:C	rs12347572	T	C	T	Hoxd9.mouse_homeodomain_1	5	1	-	8.027213970992095	1.6530242527455408	CACATAAAA
chr9	78769268	78769269	chr9:78769269:G:A	rs17788621	G	A	G	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr9	78872109	78872110	chr9:78872110:A:C	rs12376674	A	C	A	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr9	78967842	78967843	chr9:78967843:A:G	chr9:78967843:A:G	A	G	A	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr9	79129626	79129627	chr9:79129627:T:C	rs4146296	T	C	C	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr9	79143471	79143472	chr9:79143472:A:G	rs6559458	A	G	A	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr9	79256667	79256668	chr9:79256668:G:A	rs140009626	G	A	G	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr9	79377577	79377578	chr9:79377578:T:G	rs141317023	T	G	T	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr9	79382340	79382341	chr9:79382341:C:A	rs11138180	C	A	C	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr9	79403643	79403644	chr9:79403644:A:G	rs4877494	A	G	A	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr9	79501389	79501390	chr9:79501390:A:C	rs17082506	A	C	C	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr9	79501421	79501422	chr9:79501422:G:C	rs17082511	G	C	C	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr9	79610834	79610835	chr9:79610835:C:G	rs76032197	C	G	A	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr9	79611122	79611123	chr9:79611123:A:G	rs144239491	A	G	T	Hoxd9.mouse_homeodomain_1	4	1	-	7.9772278588234515	5.3221812139608735	GCAATAAAA
chr9	79612064	79612065	chr9:79612065:T:C	rs113428439	T	C	T	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr9	80208959	80208960	chr9:80208960:G:C	rs7030576	G	C	C	Hoxd9.mouse_homeodomain_1	2	1	-	8.027213970992095	4.559222313539767	CACATAAAA
chr9	80926356	80926357	chr9:80926357:T:C	rs11138911	T	C	T	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr9	81074140	81074141	chr9:81074141:C:T	rs10867691	C	T	C	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr9	81363990	81363991	chr9:81363991:T:C	rs11792869	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	6.943160709270972	5.60908210940848	CCCATTAAG
chr9	81392538	81392539	chr9:81392539:G:A	rs3860895	G	A	G	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr9	81394709	81394710	chr9:81394710:T:C	rs3908631	T	C	C	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr9	81592404	81592405	chr9:81592405:G:T	rs72747234	G	T	G	Hoxd9.mouse_homeodomain_1	2	1	-	7.716978748812629	7.0154228899258175	GACATAAAA
chr9	81597740	81597741	chr9:81597741:T:A	rs76512220	T	A	T	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr9	81597747	81597748	chr9:81597748:T:A	rs1573077	T	A	A	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr9	82730303	82730304	chr9:82730304:C:A	rs487454	C	A	A	Hoxd9.mouse_homeodomain_1	8	1	+	7.45645131454733	8.98901893988973	CCCATAAAC
chr9	82746368	82746369	chr9:82746369:C:T	rs28663018	C	T	C	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr9	82818370	82818371	chr9:82818371:G:C	rs9650765	G	C	C	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr9	82846605	82846606	chr9:82846606:T:C	rs728695	T	C	T	Hoxd9.mouse_homeodomain_1	6	1	-	8.409487817756228	1.7056618711644962	CCCATTAAA
chr9	82895706	82895707	chr9:82895707:T:C	rs72740822	T	C	T	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr9	82961262	82961263	chr9:82961263:T:A	rs2153460	T	A	T	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr9	83060838	83060839	chr9:83060839:G:A	rs567028570	G	A	G	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr9	83289497	83289498	chr9:83289498:T:G	rs2209187	T	G	T	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr9	83436318	83436319	chr9:83436319:T:C	rs76882379	T	C	T	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr9	83470900	83470901	chr9:83470901:T:G	rs7034871	T	G	T	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr9	83477217	83477218	chr9:83477218:C:T	rs12343646	C	T	T	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr9	83701988	83701989	chr9:83701989:G:C	rs11140219	G	C	G	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr9	83701992	83701993	chr9:83701993:T:G	rs77665820	T	G	G	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr9	84062814	84062815	chr9:84062815:A:T	rs10780647	A	T	A	Hoxd9.mouse_homeodomain_1	3	1	+	7.716978748812629	5.7134976120039855	GACATAAAA
chr9	84140524	84140525	chr9:84140525:G:A	rs138285593	G	A	G	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr9	84148762	84148763	chr9:84148763:G:A	rs1246260	G	A	G	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr9	84173392	84173393	chr9:84173393:C:T	rs10868109	C	T	C	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr9	84179715	84179716	chr9:84179716:T:G	rs2256603	T	G	T	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr9	84228336	84228337	chr9:84228337:A:C	rs10121960	A	C	A	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr9	84285031	84285032	chr9:84285032:A:C	rs4877832	A	C	C	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr9	84368030	84368031	chr9:84368031:T:C	rs7039104	T	C	C	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr9	84677412	84677413	chr9:84677413:C:T	rs55811269	C	T	C	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr9	84808363	84808364	chr9:84808364:T:A	rs112837959	T	A	T	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr9	85089579	85089580	chr9:85089580:G:A	rs628947	G	A	G	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr9	85157891	85157892	chr9:85157892:A:G	rs526454	A	G	A	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr9	85246847	85246848	chr9:85246848:C:T	rs17088364	C	T	C	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr9	85372815	85372816	chr9:85372816:G:C	rs34889600	G	C	G	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr9	85715960	85715961	chr9:85715961:A:G	rs117590655	A	G	A	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr9	85715974	85715975	chr9:85715975:T:C	rs116984723	T	C	t	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr9	86750987	86750988	chr9:86750988:C:A	rs11141531	C	A	C	Hoxd9.mouse_homeodomain_1	-8	0	+	0	0	.
chr9	86763351	86763352	chr9:86763352:G:A	rs10746786	G	A	G	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr9	86767843	86767844	chr9:86767844:T:C	rs12338073	T	C	T	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr9	86894469	86894470	chr9:86894470:T:A	rs10868501	T	A	T	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr9	86960887	86960888	chr9:86960888:T:C	rs113523325	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.099252595576761	6.765173995714267	GCCATTAAA
chr9	87499511	87499512	chr9:87499512:A:G	rs538321346	A	G	A	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr9	87620955	87620956	chr9:87620956:C:T	rs117037200	C	T	C	Hoxd9.mouse_homeodomain_1	2	1	+	8.099252595576761	1.6118121379531245	GCCATTAAA
chr9	88234503	88234504	chr9:88234504:G:A	rs1550285	G	A	A	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr9	88234516	88234517	chr9:88234517:C:A	rs1550284	C	A	A	Hoxd9.mouse_homeodomain_1	0	1	+	8.98901893988973	7.889898683853121	CCCATAAAA
chr9	88328388	88328389	chr9:88328389:G:T	chr9:88328389:G:T	G	T	G	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr9	88745689	88745690	chr9:88745690:T:A	rs77620062	T	A	T	Hoxd9.mouse_homeodomain_1	4	1	+	8.678783717710262	1.8369652703796566	GCCATAAAA
chr9	88745696	88745697	chr9:88745697:T:C	rs28624420	T	C	C	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr9	88801729	88801730	chr9:88801730:G:A	rs1288652	G	A	G	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr9	88808554	88808555	chr9:88808555:G:A	rs2818251	G	A	G	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr9	88938841	88938842	chr9:88938842:G:A	rs7039077	G	A	G	Hoxd9.mouse_homeodomain_1	1	1	-	6.943160709270972	5.628358794937966	CCCATTAAG
chr9	89022717	89022718	chr9:89022718:A:T	rs9410297	A	T	T	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr9	89363623	89363624	chr9:89363624:A:T	rs13297725	A	T	T	Hoxd9.mouse_homeodomain_1	8	1	+	8.287463081002919	5.354949956236852	CCAATAAAA
chr9	89478531	89478532	chr9:89478532:T:C	rs7850772	T	C	T	Hoxd9.mouse_homeodomain_1	5	1	-	8.678783717710262	2.304593999463707	GCCATAAAA
chr9	89600818	89600819	chr9:89600819:T:C	rs1571535	T	C	C	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr9	89635149	89635150	chr9:89635150:C:T	rs114210498	C	T	C	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr9	89877588	89877589	chr9:89877589:G:A	rs977832906	G	A	G	Hoxd9.mouse_homeodomain_1	0	1	+	8.099252595576761	7.3103675617196195	GCCATTAAA
chr9	89964866	89964867	chr9:89964867:A:G	rs141756488	A	G	A	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr9	89970377	89970378	chr9:89970378:C:T	rs78006928	C	T	T	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr9	89991993	89991994	chr9:89991994:A:G	rs12351881	A	G	A	Hoxd9.mouse_homeodomain_1	6	1	+	7.716978748812629	1.0131528022208975	GACATAAAA
chr9	90423850	90423851	chr9:90423851:T:G	rs2892055	T	G	G	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr9	90546285	90546286	chr9:90546286:C:T	rs114020495	C	T	C	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr9	90586245	90586246	chr9:90586246:C:T	rs73503379	C	T	C	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr9	90767688	90767689	chr9:90767689:T:A	rs7025085	T	A	.	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr9	90821976	90821977	chr9:90821977:C:G	rs290246	C	G	C	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr9	90892414	90892415	chr9:90892415:A:G	rs1172663	A	G	A	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr9	90919519	90919520	chr9:90919520:C:A	rs291756	C	A	C	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr9	91166133	91166134	chr9:91166134:C:T	rs4743820	C	T	C	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr9	91166155	91166156	chr9:91166156:T:G	rs541857280	T	G	T	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr9	91177123	91177124	chr9:91177124:C:T	rs1751796	C	T	c	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr9	91177124	91177125	chr9:91177125:A:G	rs1751797	A	G	G	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr9	91192786	91192787	chr9:91192787:G:T	rs142408183	G	T	G	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr9	91198563	91198564	chr9:91198564:G:C	rs189060513	G	C	G	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr9	91795358	91795359	chr9:91795359:A:G	rs7855609	A	G	G	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr9	91803006	91803007	chr9:91803007:C:T	rs4743854	C	T	C	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr9	91837924	91837925	chr9:91837925:G:A	rs17587223	G	A	G	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr9	91912804	91912805	chr9:91912805:G:A	rs78819566	G	A	G	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr9	92162808	92162809	chr9:92162809:C:G	rs74738345	C	G	c	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr9	92291588	92291589	chr9:92291589:G:T	rs6479416	G	T	T	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr9	92736137	92736138	chr9:92736138:G:C	rs753804	G	C	G	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr9	92804548	92804549	chr9:92804549:T:A	rs111162742	T	A	t	Hoxd9.mouse_homeodomain_1	7	1	-	7.45645131454733	5.709367499706518	CCCATAAAC
chr9	92986534	92986535	chr9:92986535:G:A	rs7875497	G	A	A	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr9	93087653	93087654	chr9:93087654:C:T	rs73651361	C	T	C	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr9	93136984	93136985	chr9:93136985:C:A	rs13287380	C	A	C	Hoxd9.mouse_homeodomain_1	1	1	+	7.091711387329735	6.1299064184321015	CCCATCAAA
chr9	93194008	93194009	chr9:93194009:A:C	rs2154079	A	C	A	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr9	93265969	93265970	chr9:93265970:A:G	rs35795732	A	G	A	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr9	93336888	93336889	chr9:93336889:A:C	rs143415484	A	C	A	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr9	93504988	93504989	chr9:93504989:T:C	rs10821145	T	C	T	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr9	93588592	93588593	chr9:93588593:C:A	rs2026942	C	A	C	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr9	94030193	94030194	chr9:94030194:G:A	rs7046354	G	A	G	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr9	94153337	94153338	chr9:94153338:G:C	rs12341048	G	C	C	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr9	94213629	94213630	chr9:94213630:T:C	rs574142289	T	C	T	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr9	94533286	94533287	chr9:94533287:T:C	rs77010793	T	C	T	Hoxd9.mouse_homeodomain_1	4	1	+	8.678783717710262	6.023737072847684	GCCATAAAA
chr9	94603941	94603942	chr9:94603942:G:A	rs1754435	G	A	G	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr9	94673319	94673320	chr9:94673320:A:G	rs180805695	A	G	A	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr9	94681388	94681389	chr9:94681389:C:G	rs79129791	C	G	C	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr9	94805655	94805656	chr9:94805656:G:A	rs533466660	G	A	G	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr9	94815473	94815474	chr9:94815474:G:T	rs72746559	G	T	G	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr9	94908360	94908361	chr9:94908361:C:T	rs529346734	C	T	C	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr9	94908387	94908388	chr9:94908388:C:T	rs72748590	C	T	C	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr9	94916084	94916085	chr9:94916085:C:T	rs75294395	C	T	C	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr9	95050057	95050058	chr9:95050058:A:G	rs4743982	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.678783717710262	7.34470511784777	GCCATAAAA
chr9	95306598	95306599	chr9:95306599:T:C	rs148614509	T	C	T	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr9	95426431	95426432	chr9:95426432:T:C	rs186883143	T	C	T	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr9	95477837	95477838	chr9:95477838:G:A	rs2297086	G	A	A	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr9	95718333	95718334	chr9:95718334:C:T	rs7873889	C	T	C	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr9	95719732	95719733	chr9:95719733:C:T	rs700986	C	T	T	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr9	95742622	95742623	chr9:95742623:G:A	rs414610	G	A	G	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr9	95847872	95847873	chr9:95847873:G:A	rs12343734	G	A	G	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr9	95876559	95876560	chr9:95876560:T:G	rs689697	T	G	T	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr9	96030258	96030259	chr9:96030259:A:G	rs1628930	A	G	G	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr9	96087341	96087342	chr9:96087342:C:T	rs4623574	C	T	C	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr9	96087351	96087352	chr9:96087352:A:G	rs978369479	A	G	A	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr9	96107701	96107702	chr9:96107702:G:A	rs10989294	G	A	G	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr9	96373240	96373241	chr9:96373241:C:T	rs10990768	C	T	C	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr9	96479243	96479244	chr9:96479244:C:T	rs66840538	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	+	8.027213970992095	6.132666665683155	CACATAAAA
chr9	96619966	96619967	chr9:96619967:C:G	rs893948412	C	G	C	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr9	96619967	96619968	chr9:96619968:T:G	rs115855585	T	G	T	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr9	96857987	96857988	chr9:96857988:A:T	rs10816667	A	T	A	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr9	96857994	96857995	chr9:96857995:A:G	rs7040493	A	G	A	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr9	97062572	97062573	chr9:97062573:T:C	rs73547512	T	C	T	Hoxd9.mouse_homeodomain_1	4	1	+	8.98901893988973	6.333972295027152	CCCATAAAA
chr9	97387050	97387051	chr9:97387051:C:G	rs12555277	C	G	G	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr9	97621843	97621844	chr9:97621844:T:C	rs2805775	T	C	C	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr9	97705859	97705860	chr9:97705860:C:A	rs72751549	C	A	C	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr9	97710920	97710921	chr9:97710921:C:T	rs80296531	C	T	C	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr9	97710945	97710946	chr9:97710946:A:G	rs76006242	A	G	A	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr9	97758192	97758193	chr9:97758193:C:T	rs78505133	C	T	C	Hoxd9.mouse_homeodomain_1	8	1	-	7.522691831404475	8.98901893988973	CCCATAAAG
chr9	97959272	97959273	chr9:97959273:C:T	rs17687621	C	T	N	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr9	97986681	97986682	chr9:97986682:A:T	rs76408563	A	T	A	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr9	98225339	98225340	chr9:98225340:A:G	rs7868451	A	G	G	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr9	98248159	98248160	chr9:98248160:G:A	rs540355157	G	A	G	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr9	98441698	98441699	chr9:98441699:T:C	rs1889983	T	C	T	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr9	98578018	98578019	chr9:98578019:A:C	rs2808536	A	C	C	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr9	98578033	98578034	chr9:98578034:T:C	rs3750344	T	C	T	Hoxd9.mouse_homeodomain_1	2	1	-	7.9772278588234515	5.2107920602579325	GCAATAAAA
chr9	98877317	98877318	chr9:98877318:C:T	rs16917982	C	T	C	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr9	98900803	98900804	chr9:98900804:C:A	rs732726	C	A	A	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr9	99013842	99013843	chr9:99013843:G:A	rs6478966	G	A	A	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr9	99057043	99057044	chr9:99057044:G:A	rs78294899	G	A	G	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr9	99430303	99430304	chr9:99430304:A:G	rs10116784	A	G	G	Hoxd9.mouse_homeodomain_1	6	1	+	7.1462160923678635	0.44239014577613167	GCCATAAAC
chr9	100355709	100355710	chr9:100355710:A:G	rs34622900	A	G	A	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr9	100621804	100621805	chr9:100621805:A:C	rs10819801	A	C	A	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr9	101061577	101061578	chr9:101061578:T:C	rs1361343	T	C	A	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr9	101506059	101506060	chr9:101506060:A:G	rs16920447	A	G	G	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr9	102186720	102186721	chr9:102186721:A:G	rs78959516	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	7.522691831404475	6.188613231541982	CCCATAAAG
chr9	102212082	102212083	chr9:102212083:A:G	rs10512295	A	G	A	Hoxd9.mouse_homeodomain_1	7	1	+	8.099252595576761	1.3954266489850298	GCCATTAAA
chr9	102313819	102313820	chr9:102313820:C:T	rs10989988	C	T	C	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr9	102404037	102404038	chr9:102404038:A:T	rs2209060	A	T	T	Hoxd9.mouse_homeodomain_1	7	1	+	7.889898683853121	6.1428148690123106	ACCATAAAA
chr9	102587566	102587567	chr9:102587567:A:G	rs77289227	A	G	A	Hoxd9.mouse_homeodomain_1	5	1	+	7.716978748812629	1.3427890305660735	GACATAAAA
chr9	102679747	102679748	chr9:102679748:C:T	rs77931406	C	T	C	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr9	102679750	102679751	chr9:102679751:A:G	rs10990231	A	G	G	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr9	102728919	102728920	chr9:102728920:G:A	rs4742855	G	A	A	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr9	103102949	103102950	chr9:103102950:C:T	rs146704182	C	T	C	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr9	103102978	103102979	chr9:103102979:C:G	rs115230405	C	G	C	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr9	103824876	103824877	chr9:103824877:A:G	rs10990952	A	G	A	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr9	104092263	104092264	chr9:104092264:G:A	rs10512326	G	A	G	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr9	104092723	104092724	chr9:104092724:C:A	rs76461259	C	A	C	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr9	104606135	104606136	chr9:104606136:A:G	rs10117926	A	G	A	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr9	104606159	104606160	chr9:104606160:A:G	rs57726274	A	G	A	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr9	104608510	104608511	chr9:104608511:G:A	rs1916679	G	A	G	Hoxd9.mouse_homeodomain_1	0	1	+	7.1462160923678635	6.357331058510722	GCCATAAAC
chr9	104774613	104774614	chr9:104774614:A:G	rs2515606	A	G	A	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr9	104833696	104833697	chr9:104833697:C:A	rs12351480	C	A	C	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr9	104859639	104859640	chr9:104859640:T:C	rs2472440	T	C	T	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr9	105311411	105311412	chr9:105311412:G:T	rs80086353	G	T	G	Hoxd9.mouse_homeodomain_1	15	0	-	0	0	.
chr9	105695524	105695525	chr9:105695525:A:G	rs7039618	A	G	A	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr9	105698167	105698168	chr9:105698168:C:G	rs115085698	C	G	C	Hoxd9.mouse_homeodomain_1	0	1	-	7.212456609225008	7.522691831404475	GCCATAAAG
chr9	105855816	105855817	chr9:105855817:T:C	rs2997731	T	C	C	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr9	105874205	105874206	chr9:105874206:T:A	rs3010955	T	A	T	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr9	105993441	105993442	chr9:105993442:C:A	rs138574160	C	A	C	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr9	106277833	106277834	chr9:106277834:A:G	rs77827927	A	G	A	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr9	106322792	106322793	chr9:106322793:G:T	rs1385144	G	T	G	Hoxd9.mouse_homeodomain_1	8	1	-	7.1462160923678635	8.678783717710262	GCCATAAAC
chr9	106456345	106456346	chr9:106456346:C:T	rs2900412	C	T	C	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr9	106514338	106514339	chr9:106514339:T:G	rs7855801	T	G	T	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr9	106587131	106587132	chr9:106587132:A:G	rs6477531	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.287463081002919	6.953384481140425	CCAATAAAA
chr9	106921823	106921824	chr9:106921824:T:C	rs16925943	T	C	T	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr9	106933771	106933772	chr9:106933772:T:C	rs78894169	T	C	T	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr9	106980685	106980686	chr9:106980686:C:T	rs72743709	C	T	C	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr9	107251698	107251699	chr9:107251699:C:T	rs7867544	C	T	C	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr9	107284391	107284392	chr9:107284392:G:A	rs11573616	G	A	G	Hoxd9.mouse_homeodomain_1	1	1	-	7.075409217893736	5.760607303560727	CCCGTTAAA
chr9	107309416	107309417	chr9:107309417:C:T	rs72738207	C	T	C	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr9	107368949	107368950	chr9:107368950:G:A	rs75892491	G	A	G	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr9	107404653	107404654	chr9:107404654:C:T	rs12002372	C	T	C	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr9	107647310	107647311	chr9:107647311:C:G	rs7866207	C	G	G	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr9	107705141	107705142	chr9:107705142:A:G	rs6477590	A	G	G	Hoxd9.mouse_homeodomain_1	8	1	+	8.409487817756228	6.943160709270972	CCCATTAAA
chr9	107743655	107743656	chr9:107743656:G:A	rs4376551	G	A	G	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr9	107750269	107750270	chr9:107750270:T:C	rs7860653	T	C	C	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr9	107750277	107750278	chr9:107750278:A:C	rs1029176174	A	C	A	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr9	107848203	107848204	chr9:107848204:G:A	rs73653668	G	A	G	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr9	107975477	107975478	chr9:107975478:C:T	rs74568141	C	T	C	Hoxd9.mouse_homeodomain_1	5	1	+	7.091711387329735	8.409487817756228	CCCATCAAA
chr9	108117673	108117674	chr9:108117674:A:G	rs145185651	A	G	A	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr9	108137010	108137011	chr9:108137011:C:A	rs627610	C	A	C	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr9	108244594	108244595	chr9:108244595:C:A	rs41438046	C	A	C	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr9	108469549	108469550	chr9:108469550:C:T	rs12554389	C	T	C	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr9	108635436	108635437	chr9:108635437:A:G	rs117138315	A	G	A	Hoxd9.mouse_homeodomain_1	0	1	+	7.889898683853121	8.678783717710262	ACCATAAAA
chr9	108744286	108744287	chr9:108744287:T:C	rs13301088	T	C	T	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr9	108749389	108749390	chr9:108749390:G:A	rs2039810	G	A	G	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr9	108751634	108751635	chr9:108751635:T:C	rs10816711	T	C	T	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr9	108814272	108814273	chr9:108814273:G:A	rs574108082	G	A	G	Hoxd9.mouse_homeodomain_1	0	1	-	8.027213970992095	6.132666665683155	CACATAAAA
chr9	109397223	109397224	chr9:109397224:C:T	rs113632189	C	T	C	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr9	109585692	109585693	chr9:109585693:G:A	rs884919	G	A	A	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr9	109745916	109745917	chr9:109745917:T:C	rs116897849	T	C	C	Hoxd9.mouse_homeodomain_1	-5	0	+	0	0	.
chr9	109769338	109769339	chr9:109769339:T:C	rs35167002	T	C	T	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr9	109817105	109817106	chr9:109817106:T:G	rs10980067	T	G	T	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr9	110082839	110082840	chr9:110082840:A:G	rs113589812	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.409487817756228	7.075409217893736	CCCATTAAA
chr9	110157818	110157819	chr9:110157819:G:A	rs7023507	G	A	G	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr9	110221972	110221973	chr9:110221973:C:G	rs148214333	C	G	C	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr9	110221974	110221975	chr9:110221975:G:T	rs10759401	G	T	T	Hoxd9.mouse_homeodomain_1	-16	0	-	0	0	.
chr9	110238790	110238791	chr9:110238791:G:A	rs12683470	G	A	G	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr9	110520640	110520641	chr9:110520641:A:G	rs72750766	A	G	A	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr9	110537925	110537926	chr9:110537926:C:T	rs10759440	C	T	C	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr9	110620222	110620223	chr9:110620223:A:T	rs10817057	A	T	T	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr9	110655904	110655905	chr9:110655905:C:T	rs3010801	C	T	C	Hoxd9.mouse_homeodomain_1	0	1	+	8.027213970992095	6.132666665683155	CACATAAAA
chr9	110782862	110782863	chr9:110782863:C:T	rs55957860	C	T	C	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr9	110934369	110934370	chr9:110934370:T:C	rs12380171	T	C	T	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr9	111010651	111010652	chr9:111010652:T:A	rs2110547	T	A	A	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr9	111016175	111016176	chr9:111016176:C:T	rs917933	C	T	C	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr9	111118683	111118684	chr9:111118684:T:C	rs10759492	T	C	T	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr9	111262616	111262617	chr9:111262617:A:G	rs17228272	A	G	G	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr9	111299711	111299712	chr9:111299712:G:C	chr9:111299712:G:C	G	C	G	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr9	111427433	111427434	chr9:111427434:A:G	chr9:111427434:A:G	A	G	A	Hoxd9.mouse_homeodomain_1	3	1	+	8.027213970992095	6.693135371129603	CACATAAAA
chr9	111485553	111485554	chr9:111485554:A:G	rs113008234	A	G	A	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr9	111604842	111604843	chr9:111604843:G:A	rs59773154	G	A	G	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr9	111636334	111636335	chr9:111636335:A:T	rs62569895	A	T	A	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr9	111636349	111636350	chr9:111636350:G:T	rs10817202	G	T	C	Hoxd9.mouse_homeodomain_1	2	1	-	7.889898683853121	7.188342824966311	ACCATAAAA
chr9	111851879	111851880	chr9:111851880:T:C	chr9:111851880:T:C	T	C	T	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr9	111924479	111924480	chr9:111924480:G:A	rs76032073	G	A	G	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr9	111959296	111959297	chr9:111959297:T:C	rs13284269	T	C	T	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr9	111964932	111964933	chr9:111964933:G:A	rs12686259	G	A	G	Hoxd9.mouse_homeodomain_1	8	1	+	7.522691831404475	8.98901893988973	CCCATAAAG
chr9	111964939	111964940	chr9:111964940:A:C	rs4978473	A	C	C	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr9	111975727	111975728	chr9:111975728:G:A	rs112058656	G	A	G	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr9	111975968	111975969	chr9:111975969:C:T	rs117119539	C	T	C	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr9	112005478	112005479	chr9:112005479:T:C	rs10981200	T	C	T	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr9	112064903	112064904	chr9:112064904:G:A	rs10817259	G	A	G	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr9	112126054	112126055	chr9:112126055:C:T	rs75496980	C	T	T	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr9	112262690	112262691	chr9:112262691:G:A	rs3843823	G	A	A	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr9	112546396	112546397	chr9:112546397:T:C	rs185261530	T	C	T	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr9	112854889	112854890	chr9:112854890:G:A	rs117692852	G	A	G	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr9	112854892	112854893	chr9:112854893:G:A	rs10981530	G	A	G	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr9	112884316	112884317	chr9:112884317:G:A	rs551102650	G	A	G	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr9	113235761	113235762	chr9:113235762:G:A	rs116196727	G	A	G	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr9	113237321	113237322	chr9:113237322:G:A	rs112742808	G	A	G	Hoxd9.mouse_homeodomain_1	1	1	-	6.943160709270972	5.628358794937966	CCCATTAAG
chr9	113340048	113340049	chr9:113340049:T:A	chr9:113340049:T:A	T	A	T	Hoxd9.mouse_homeodomain_1	5	1	-	8.027213970992095	7.447682848858594	CACATAAAA
chr9	113343735	113343736	chr9:113343736:C:A	rs10981751	C	A	C	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr9	113343776	113343777	chr9:113343777:C:T	rs10981752	C	T	C	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr9	113437048	113437049	chr9:113437049:A:G	rs75641296	A	G	A	Hoxd9.mouse_homeodomain_1	22	0	+	0	0	.
chr9	113484507	113484508	chr9:113484508:G:A	rs556489353	G	A	G	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr9	113604359	113604360	chr9:113604360:G:A	rs587614	G	A	G	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr9	113663579	113663580	chr9:113663580:T:C	rs7854061	T	C	C	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr9	113804604	113804605	chr9:113804605:A:C	rs10981935	A	C	C	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr9	113940205	113940206	chr9:113940206:G:C	rs115344591	G	C	G	Hoxd9.mouse_homeodomain_1	1	1	-	7.9772278588234515	1.5676946300410868	GCAATAAAA
chr9	113944926	113944927	chr9:113944927:G:A	rs1536965	G	A	G	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr9	113947813	113947814	chr9:113947814:G:A	rs1330166	G	A	A	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr9	113957928	113957929	chr9:113957929:A:G	rs1235959160	A	G	A	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr9	113957942	113957943	chr9:113957943:C:T	rs16910968	C	T	C	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr9	113987315	113987316	chr9:113987316:A:G	rs9695257	A	G	G	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr9	114005489	114005490	chr9:114005490:C:T	rs11788661	C	T	C	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.
chr9	114102630	114102631	chr9:114102631:T:C	rs4979338	T	C	C	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr9	114211474	114211475	chr9:114211475:G:A	rs4979354	G	A	G	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr9	114363927	114363928	chr9:114363928:G:C	rs958231981	G	C	G	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr9	114366806	114366807	chr9:114366807:G:A	rs2636902	G	A	G	Hoxd9.mouse_homeodomain_1	1	1	-	8.98901893988973	7.674217025556723	CCCATAAAA
chr9	114429558	114429559	chr9:114429559:C:T	rs4978585	C	T	C	Hoxd9.mouse_homeodomain_1	11	0	-	0	0	.
chr9	114429582	114429583	chr9:114429583:G:A	rs368079943	G	A	G	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr9	114483428	114483429	chr9:114483429:G:A	rs10817624	G	A	G	Hoxd9.mouse_homeodomain_1	0	1	-	7.075409217893736	5.180861912584794	CCCGTTAAA
chr9	114483436	114483437	chr9:114483437:C:A	rs10982240	C	A	A	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr9	114501802	114501803	chr9:114501803:G:A	rs4979418	G	A	G	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr9	114552049	114552050	chr9:114552050:T:C	rs77257193	T	C	C	Hoxd9.mouse_homeodomain_1	3	1	-	8.027213970992095	6.693135371129603	CACATAAAA
chr9	114587550	114587551	chr9:114587551:G:C	rs953123656	G	C	G	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr9	114587553	114587554	chr9:114587554:G:A	rs189533073	G	A	G	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr9	114610328	114610329	chr9:114610329:G:A	rs7851940	G	A	G	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr9	114754137	114754138	chr9:114754138:C:A	rs7038398	C	A	A	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr9	114840010	114840011	chr9:114840011:C:G	rs138565740	C	G	C	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr9	114840015	114840016	chr9:114840016:A:G	rs56235203	A	G	G	Hoxd9.mouse_homeodomain_1	4	1	-	8.287463081002919	5.632416436140341	CCAATAAAA
chr9	115126926	115126927	chr9:115126927:G:A	rs10817713	G	A	G	Hoxd9.mouse_homeodomain_1	17	0	+	0	0	.
chr9	115146675	115146676	chr9:115146676:G:A	rs1111784	G	A	G	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr9	115191697	115191698	chr9:115191698:G:A	rs1537731	G	A	A	Hoxd9.mouse_homeodomain_1	14	0	-	0	0	.
chr9	115249770	115249771	chr9:115249771:G:A	rs12380804	G	A	G	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr9	115321924	115321925	chr9:115321925:G:A	rs4979517	G	A	A	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr9	115369664	115369665	chr9:115369665:A:G	rs34568491	A	G	A	Hoxd9.mouse_homeodomain_1	-12	0	+	0	0	.
chr9	115391291	115391292	chr9:115391292:C:A	rs4474090	C	A	A	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr9	115437388	115437389	chr9:115437389:A:G	rs10982746	A	G	A	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr9	115672964	115672965	chr9:115672965:A:G	rs117431618	A	G	A	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr9	115690826	115690827	chr9:115690827:A:G	rs10817820	A	G	A	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr9	115892280	115892281	chr9:115892281:T:C	rs1157190210	T	C	T	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr9	115976749	115976750	chr9:115976750:A:G	rs10983043	A	G	a	Hoxd9.mouse_homeodomain_1	3	1	+	7.9772278588234515	6.643149258960959	GCAATAAAA
chr9	116543515	116543516	chr9:116543516:T:C	rs17220380	T	C	T	Hoxd9.mouse_homeodomain_1	4	1	+	8.678783717710262	6.023737072847684	GCCATAAAA
chr9	116676631	116676632	chr9:116676632:A:C	rs1090026	A	C	A	Hoxd9.mouse_homeodomain_1	7	1	+	8.678783717710262	5.789367947679677	GCCATAAAA
chr9	116789396	116789397	chr9:116789397:A:C	rs192421562	A	C	A	Hoxd9.mouse_homeodomain_1	4	1	-	6.943160709270972	0.10134226194036705	CCCATTAAG
chr9	117038530	117038531	chr9:117038531:T:C	rs191245152	T	C	T	Hoxd9.mouse_homeodomain_1	7	1	-	7.1462160923678635	0.44239014577613167	GCCATAAAC
chr9	117268974	117268975	chr9:117268975:G:A	rs7043216	G	A	G	Hoxd9.mouse_homeodomain_1	18	0	+	0	0	.
chr9	117521892	117521893	chr9:117521893:G:C	rs10983685	G	C	G	Hoxd9.mouse_homeodomain_1	1	1	-	7.1462160923678635	0.7366828635854974	GCCATAAAC
chr9	117540563	117540564	chr9:117540564:T:C	rs559135	T	C	C	Hoxd9.mouse_homeodomain_1	4	1	+	7.889898683853121	5.234852038990543	ACCATAAAA
chr9	117691562	117691563	chr9:117691563:C:T	rs4837497	C	T	C	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr9	117740117	117740118	chr9:117740118:G:A	rs12337672	G	A	G	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr9	117771226	117771227	chr9:117771227:C:A	rs10983782	C	A	C	Hoxd9.mouse_homeodomain_1	0	1	+	8.98901893988973	7.889898683853121	CCCATAAAA
chr9	118092158	118092159	chr9:118092159:G:A	rs16906696	G	A	A	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr9	118575660	118575661	chr9:118575661:T:C	rs35214762	T	C	T	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr9	118624770	118624771	chr9:118624771:C:A	rs28520513	C	A	C	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr9	119009524	119009525	chr9:119009525:C:A	rs12554055	C	A	C	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr9	119254811	119254812	chr9:119254812:G:A	rs57321722	G	A	G	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr9	119765971	119765972	chr9:119765972:A:T	rs10984694	A	T	T	Hoxd9.mouse_homeodomain_1	7	1	+	7.45645131454733	5.709367499706518	CCCATAAAC
chr9	120736056	120736057	chr9:120736057:C:T	rs10985015	C	T	T	Hoxd9.mouse_homeodomain_1	12	0	+	0	0	.
chr9	120805236	120805237	chr9:120805237:C:G	rs74934864	C	G	C	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr9	120892805	120892806	chr9:120892806:A:C	rs78167671	A	C	A	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr9	120935751	120935752	chr9:120935752:C:T	rs7863127	C	T	C	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr9	121159998	121159999	chr9:121159999:G:A	rs74355287	G	A	G	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr9	121457775	121457776	chr9:121457776:G:A	rs10985250	G	A	G	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr9	121787362	121787363	chr9:121787363:C:A	rs10985375	C	A	C	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr9	121807090	121807091	chr9:121807091:A:G	rs62643561	A	G	G	Hoxd9.mouse_homeodomain_1	4	1	-	7.241935125048919	4.5868884801863405	CCCATACAA
chr9	121836069	121836070	chr9:121836070:T:C	rs73539170	T	C	T	Hoxd9.mouse_homeodomain_1	19	0	-	0	0	.
chr9	121902627	121902628	chr9:121902628:G:A	chr9:121902628:G:A	G	A	G	Hoxd9.mouse_homeodomain_1	-9	0	-	0	0	.
chr9	122166931	122166932	chr9:122166932:A:G	rs1411444	A	G	G	Hoxd9.mouse_homeodomain_1	25	0	+	0	0	.
chr9	122394918	122394919	chr9:122394919:C:A	rs10306194	C	A	c	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr9	122394984	122394985	chr9:122394985:G:A	rs111369216	G	A	g	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr9	123082302	123082303	chr9:123082303:G:A	rs2791437	G	A	g	Hoxd9.mouse_homeodomain_1	9	0	-	0	0	.
chr9	123312714	123312715	chr9:123312715:G:A	rs36101766	G	A	G	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr9	123329538	123329539	chr9:123329539:A:G	rs59475943	A	G	A	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr9	123438189	123438190	chr9:123438190:C:G	rs4240478	C	G	C	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr9	123640617	123640618	chr9:123640618:T:A	rs73665315	T	A	T	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr9	123828679	123828680	chr9:123828680:C:G	rs656906	C	G	C	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr9	123945895	123945896	chr9:123945896:G:C	rs7042625	G	C	G	Hoxd9.mouse_homeodomain_1	-18	0	-	0	0	.
chr9	124004952	124004953	chr9:124004953:T:C	rs7046300	T	C	C	Hoxd9.mouse_homeodomain_1	12	0	-	0	0	.
chr9	124793448	124793449	chr9:124793449:G:A	rs547067436	G	A	A	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr9	124834575	124834576	chr9:124834576:A:G	rs118164758	A	G	A	Hoxd9.mouse_homeodomain_1	-10	0	-	0	0	.
chr9	125172070	125172071	chr9:125172071:A:C	rs2416954	A	C	A	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr9	125172669	125172670	chr9:125172670:G:C	chr9:125172670:G:C	G	C	G	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr9	125235023	125235024	chr9:125235024:G:A	rs12009	G	A	G	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr9	125381292	125381293	chr9:125381293:A:C	rs75619123	A	C	a	Hoxd9.mouse_homeodomain_1	-14	0	-	0	0	.
chr9	125492697	125492698	chr9:125492698:A:G	rs916998345	A	G	A	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr9	125600457	125600458	chr9:125600458:A:G	rs476819	A	G	A	Hoxd9.mouse_homeodomain_1	14	0	+	0	0	.
chr9	125691325	125691326	chr9:125691326:T:C	rs11793676	T	C	T	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr9	125762754	125762755	chr9:125762755:A:G	rs2050764	A	G	A	Hoxd9.mouse_homeodomain_1	0	1	+	7.889898683853121	8.678783717710262	ACCATAAAA
chr9	125933047	125933048	chr9:125933048:T:C	rs10987045	T	C	T	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr9	126339226	126339227	chr9:126339227:T:C	rs112074580	T	C	T	Hoxd9.mouse_homeodomain_1	13	0	-	0	0	.
chr9	126339238	126339239	chr9:126339239:G:A	rs7028698	G	A	G	Hoxd9.mouse_homeodomain_1	1	1	-	8.099252595576761	6.784450681243753	GCCATTAAA
chr9	126339252	126339253	chr9:126339253:T:C	rs4529551	T	C	T	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr9	126517674	126517675	chr9:126517675:G:A	rs1050898017	G	A	G	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr9	126584660	126584661	chr9:126584661:C:T	rs17358875	C	T	C	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr9	126644364	126644365	chr9:126644365:T:C	rs7858338	T	C	T	Hoxd9.mouse_homeodomain_1	3	1	-	8.099252595576761	6.765173995714267	GCCATTAAA
chr9	126699796	126699797	chr9:126699797:G:A	rs7023938	G	A	G	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr9	126716966	126716967	chr9:126716967:G:A	rs13287144	G	A	G	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr9	126722856	126722857	chr9:126722857:A:G	rs529575717	A	G	A	Hoxd9.mouse_homeodomain_1	-11	0	+	0	0	.
chr9	126722857	126722858	chr9:126722858:T:C	rs60783537	T	C	C	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr9	126722866	126722867	chr9:126722867:C:A	rs879408805	C	A	C	Hoxd9.mouse_homeodomain_1	-1	0	+	0	0	.
chr9	126745791	126745792	chr9:126745792:A:G	rs7853493	A	G	g	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr9	127036336	127036337	chr9:127036337:C:G	rs117187616	C	G	C	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr9	127151326	127151327	chr9:127151327:A:G	rs13296793	A	G	A	Hoxd9.mouse_homeodomain_1	-13	0	-	0	0	.
chr9	127186219	127186220	chr9:127186220:A:G	rs115278631	A	G	A	Hoxd9.mouse_homeodomain_1	-7	0	+	0	0	.
chr9	127506075	127506076	chr9:127506076:G:A	rs58280857	G	A	G	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr9	127506076	127506077	chr9:127506077:G:C	rs11545940	G	C	G	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr9	127911435	127911436	chr9:127911436:G:A	rs76839858	G	A	G	Hoxd9.mouse_homeodomain_1	24	0	+	0	0	.
chr9	127990751	127990752	chr9:127990752:T:C	rs10987807	T	C	C	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr9	128033626	128033627	chr9:128033627:G:A	rs77344341	G	A	G	Hoxd9.mouse_homeodomain_1	27	0	-	0	0	.
chr9	128086068	128086069	chr9:128086069:A:G	rs569145263	A	G	A	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr9	128294226	128294227	chr9:128294227:G:A	rs117248514	G	A	G	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr9	128558585	128558586	chr9:128558586:T:G	chr9:128558586:T:G	T	G	T	Hoxd9.mouse_homeodomain_1	26	0	-	0	0	.
chr9	128558631	128558632	chr9:128558632:T:C	rs144171907	T	C	T	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr9	128933490	128933491	chr9:128933491:C:T	rs77708791	C	T	C	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr9	129115194	129115195	chr9:129115195:C:T	rs10760588	C	T	C	Hoxd9.mouse_homeodomain_1	1	1	+	8.98901893988973	7.674217025556723	CCCATAAAA
chr9	129181858	129181859	chr9:129181859:C:T	rs913264	C	T	C	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr9	129294038	129294039	chr9:129294039:C:T	rs10819490	C	T	T	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr9	129345429	129345430	chr9:129345430:A:T	rs17457439	A	T	A	Hoxd9.mouse_homeodomain_1	-12	0	-	0	0	.
chr9	129425857	129425858	chr9:129425858:T:C	rs796719541	T	C	T	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr9	129425875	129425876	chr9:129425876:A:T	rs74426124	A	T	A	Hoxd9.mouse_homeodomain_1	3	1	+	7.091711387329735	5.08823025052109	CCCATCAAA
chr9	129425900	129425901	chr9:129425901:A:C	rs72762484	A	C	g	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr9	129611197	129611198	chr9:129611198:A:T	rs187876960	A	T	A	Hoxd9.mouse_homeodomain_1	10	0	+	0	0	.
chr9	129712549	129712550	chr9:129712550:C:T	rs2278623	C	T	C	Hoxd9.mouse_homeodomain_1	20	0	-	0	0	.
chr9	129761580	129761581	chr9:129761581:A:G	rs10118377	A	G	a	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr9	129945266	129945267	chr9:129945267:T:C	rs60155447	T	C	T	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr9	129989422	129989423	chr9:129989423:T:G	rs78086972	T	G	T	Hoxd9.mouse_homeodomain_1	4	1	+	7.522691831404475	0.6808733840738688	CCCATAAAG
chr9	130029992	130029993	chr9:130029993:T:C	rs12353358	T	C	T	Hoxd9.mouse_homeodomain_1	-6	0	+	0	0	.
chr9	130036417	130036418	chr9:130036418:T:C	rs75644252	T	C	C	Hoxd9.mouse_homeodomain_1	3	1	-	8.027213970992095	6.693135371129603	CACATAAAA
chr9	130045625	130045626	chr9:130045626:G:A	rs13297243	G	A	G	Hoxd9.mouse_homeodomain_1	16	0	+	0	0	.
chr9	130058968	130058969	chr9:130058969:C:T	rs74694338	C	T	C	Hoxd9.mouse_homeodomain_1	8	1	+	7.1462160923678635	5.746270592944195	GCCATAAAC
chr9	130118814	130118815	chr9:130118815:A:G	rs75776870	A	G	A	Hoxd9.mouse_homeodomain_1	21	0	+	0	0	.
chr9	130290820	130290821	chr9:130290821:C:T	chr9:130290821:C:T	C	T	C	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr9	130329317	130329318	chr9:130329318:C:T	rs36135802	C	T	t	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr9	130435427	130435428	chr9:130435428:T:C	rs12342208	T	C	C	Hoxd9.mouse_homeodomain_1	21	0	-	0	0	.
chr9	130757829	130757830	chr9:130757830:T:C	rs7018747	T	C	C	Hoxd9.mouse_homeodomain_1	28	0	-	0	0	.
chr9	130839818	130839819	chr9:130839819:C:G	rs13294646	C	G	C	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr9	130935955	130935956	chr9:130935956:T:C	rs7868778	T	C	C	Hoxd9.mouse_homeodomain_1	28	0	+	0	0	.
chr9	131170146	131170147	chr9:131170147:A:G	rs719854	A	G	A	Hoxd9.mouse_homeodomain_1	16	0	-	0	0	.
chr9	131271672	131271673	chr9:131271673:G:A	rs72619323	G	A	G	Hoxd9.mouse_homeodomain_1	0	1	+	7.1462160923678635	6.357331058510722	GCCATAAAC
chr9	131321888	131321889	chr9:131321889:C:T	rs4740225	C	T	C	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr9	131396949	131396950	chr9:131396950:T:G	rs517091	T	G	G	Hoxd9.mouse_homeodomain_1	3	1	-	8.287463081002919	1.7119549767994378	CCAATAAAA
chr9	131501266	131501267	chr9:131501267:A:T	rs779489990	A	T	A	Hoxd9.mouse_homeodomain_1	3	1	+	7.212456609225008	5.2089754724163635	GCCATAAAG
chr9	131646450	131646451	chr9:131646451:T:C	rs7867056	T	C	C	Hoxd9.mouse_homeodomain_1	9	0	+	0	0	.
chr9	131703673	131703674	chr9:131703674:G:A	rs79196251	G	A	.	Hoxd9.mouse_homeodomain_1	-10	0	+	0	0	.
chr9	131799319	131799320	chr9:131799320:G:A	rs558392672	G	A	G	Hoxd9.mouse_homeodomain_1	1	1	-	8.98901893988973	7.674217025556723	CCCATAAAA
chr9	132289083	132289084	chr9:132289084:G:A	rs75147566	G	A	G	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr9	132295480	132295481	chr9:132295481:G:T	rs11243718	G	T	G	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr9	132586256	132586257	chr9:132586257:C:T	rs78781031	C	T	C	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr9	132731331	132731332	chr9:132731332:C:T	rs13289553	C	T	C	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr9	132756817	132756818	chr9:132756818:A:G	rs75012809	A	G	A	Hoxd9.mouse_homeodomain_1	7	1	+	8.98901893988973	2.285192993297999	CCCATAAAA
chr9	132861700	132861701	chr9:132861701:T:C	rs10491535	T	C	T	Hoxd9.mouse_homeodomain_1	-18	0	+	0	0	.
chr9	132861714	132861715	chr9:132861715:A:G	rs10491903	A	G	A	Hoxd9.mouse_homeodomain_1	-4	0	+	0	0	.
chr9	132962432	132962433	chr9:132962433:T:C	rs3011258	T	C	C	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr9	133264213	133264214	chr9:133264214:C:T	rs986238982	C	T	c	Hoxd9.mouse_homeodomain_1	-5	0	-	0	0	.
chr9	133272226	133272227	chr9:133272227:T:C	rs967002727	T	C	t	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr9	133491873	133491874	chr9:133491874:G:A	rs79887149	G	A	G	Hoxd9.mouse_homeodomain_1	17	0	-	0	0	.
chr9	133494961	133494962	chr9:133494962:G:A	rs28707006	G	A	G	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr9	133527451	133527452	chr9:133527452:C:T	rs112818323	C	T	C	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr9	133580774	133580775	chr9:133580775:A:G	rs11515895	A	G	A	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr9	133855954	133855955	chr9:133855955:A:G	rs371043546	A	G	A	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr9	133855955	133855956	chr9:133855956:C:A	rs3819502	C	A	A	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr9	133901528	133901529	chr9:133901529:C:T	rs2519787	C	T	C	Hoxd9.mouse_homeodomain_1	-13	0	+	0	0	.
chr9	133944823	133944824	chr9:133944824:C:A	chr9:133944824:C:A	C	A	C	Hoxd9.mouse_homeodomain_1	18	0	-	0	0	.
chr9	134065034	134065035	chr9:134065035:G:A	rs61579331	G	A	G	Hoxd9.mouse_homeodomain_1	23	0	-	0	0	.
chr9	134065035	134065036	chr9:134065036:C:T	chr9:134065036:C:T	C	T	c	Hoxd9.mouse_homeodomain_1	22	0	-	0	0	.
chr9	134065059	134065060	chr9:134065060:A:G	rs113289159	A	G	A	Hoxd9.mouse_homeodomain_1	-2	0	-	0	0	.
chr9	134107578	134107579	chr9:134107579:C:A	rs13301297	C	A	C	Hoxd9.mouse_homeodomain_1	19	0	+	0	0	.
chr9	134403253	134403254	chr9:134403254:A:G	rs12352012	A	G	A	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr9	134622954	134622955	chr9:134622955:T:C	rs57187152	T	C	T	Hoxd9.mouse_homeodomain_1	-15	0	-	0	0	.
chr9	134645002	134645003	chr9:134645003:T:C	rs74852134	T	C	T	Hoxd9.mouse_homeodomain_1	15	0	+	0	0	.
chr9	134751869	134751870	chr9:134751870:C:T	rs73664127	C	T	C	Hoxd9.mouse_homeodomain_1	24	0	-	0	0	.
chr9	134785642	134785643	chr9:134785643:T:G	rs4072077	T	G	T	Hoxd9.mouse_homeodomain_1	-14	0	+	0	0	.
chr9	134785660	134785661	chr9:134785661:T:C	rs34496826	T	C	T	Hoxd9.mouse_homeodomain_1	4	1	+	7.241935125048919	4.5868884801863405	CCCATACAA
chr9	134812211	134812212	chr9:134812212:T:A	rs10745387	T	A	A	Hoxd9.mouse_homeodomain_1	-1	0	-	0	0	.
chr9	134862709	134862710	chr9:134862710:T:C	rs113724659	T	C	T	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr9	134925127	134925128	chr9:134925128:G:A	rs116220947	G	A	g	Hoxd9.mouse_homeodomain_1	-20	0	+	0	0	.
chr9	134961185	134961186	chr9:134961186:G:A	rs147877086	G	A	G	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr9	134961186	134961187	chr9:134961187:C:G	rs7021103	C	G	C	Hoxd9.mouse_homeodomain_1	-16	0	+	0	0	.
chr9	134993714	134993715	chr9:134993715:A:G	rs2279264	A	G	G	Hoxd9.mouse_homeodomain_1	-2	0	+	0	0	.
chr9	135033453	135033454	chr9:135033454:C:A	rs4842212	C	A	C	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr9	135046440	135046441	chr9:135046441:C:T	rs745668611	C	T	C	Hoxd9.mouse_homeodomain_1	20	0	+	0	0	.
chr9	135072475	135072476	chr9:135072476:T:C	rs4842218	T	C	T	Hoxd9.mouse_homeodomain_1	-9	0	+	0	0	.
chr9	135081658	135081659	chr9:135081659:C:T	rs9696604	C	T	C	Hoxd9.mouse_homeodomain_1	23	0	+	0	0	.
chr9	135085049	135085050	chr9:135085050:A:G	rs7857908	A	G	G	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr9	135124155	135124156	chr9:135124156:C:T	rs17039706	C	T	C	Hoxd9.mouse_homeodomain_1	-17	0	-	0	0	.
chr9	135128751	135128752	chr9:135128752:G:A	rs72760837	G	A	G	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr9	135203517	135203518	chr9:135203518:G:T	rs2382858	G	T	T	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr9	135325950	135325951	chr9:135325951:A:G	rs6538015	A	G	G	Hoxd9.mouse_homeodomain_1	10	0	-	0	0	.
chr9	135330236	135330237	chr9:135330237:G:A	rs116129021	G	A	G	Hoxd9.mouse_homeodomain_1	26	0	+	0	0	.
chr9	135520818	135520819	chr9:135520819:C:T	rs11103049	C	T	T	Hoxd9.mouse_homeodomain_1	-11	0	-	0	0	.
chr9	135591111	135591112	chr9:135591112:G:T	rs58977603	G	T	G	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr9	135770618	135770619	chr9:135770619:G:T	rs10735240	G	T	G	Hoxd9.mouse_homeodomain_1	-3	0	+	0	0	.
chr9	135882801	135882802	chr9:135882802:C:T	rs371452664	C	T	C	Hoxd9.mouse_homeodomain_1	25	0	-	0	0	.
chr9	135975995	135975996	chr9:135975996:A:G	rs4841903	A	G	a	Hoxd9.mouse_homeodomain_1	27	0	+	0	0	.
chr9	135983957	135983958	chr9:135983958:G:A	rs148815204	G	A	G	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr9	136080564	136080565	chr9:136080565:A:G	rs7041423	A	G	A	Hoxd9.mouse_homeodomain_1	-19	0	+	0	0	.
chr9	136339481	136339482	chr9:136339482:A:G	rs72775743	A	G	G	Hoxd9.mouse_homeodomain_1	-4	0	-	0	0	.
chr9	136447159	136447160	chr9:136447160:T:C	rs3812591	T	C	T	Hoxd9.mouse_homeodomain_1	-19	0	-	0	0	.
chr9	136588838	136588839	chr9:136588839:T:C	rs147150131	T	C	T	Hoxd9.mouse_homeodomain_1	13	0	+	0	0	.
chr9	136635214	136635215	chr9:136635215:A:T	rs10116725	A	T	T	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr9	136641213	136641214	chr9:136641214:T:C	rs7859797	T	C	C	Hoxd9.mouse_homeodomain_1	11	0	+	0	0	.
chr9	136929217	136929218	chr9:136929218:C:T	rs7019752	C	T	C	Hoxd9.mouse_homeodomain_1	-3	0	-	0	0	.
chr9	136932120	136932121	chr9:136932121:T:G	rs4880166	T	G	G	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr9	137278422	137278423	chr9:137278423:C:A	rs148897511	C	A	C	Hoxd9.mouse_homeodomain_1	-6	0	-	0	0	.
chr9	137293772	137293773	chr9:137293773:A:G	rs7850758	A	G	A	Hoxd9.mouse_homeodomain_1	-20	0	-	0	0	.
chr9	137398035	137398036	chr9:137398036:A:G	rs138100970	A	G	A	Hoxd9.mouse_homeodomain_1	-17	0	+	0	0	.
chr9	137420572	137420573	chr9:137420573:G:A	rs28787940	G	A	G	Hoxd9.mouse_homeodomain_1	-15	0	+	0	0	.
chr9	137556559	137556560	chr9:137556560:C:T	rs2282465	C	T	C	Hoxd9.mouse_homeodomain_1	-8	0	-	0	0	.
chr9	137711543	137711544	chr9:137711544:T:C	rs4631547	T	C	T	Hoxd9.mouse_homeodomain_1	5	1	-	8.678783717710262	2.304593999463707	GCCATAAAA
chr9	138045343	138045344	chr9:138045344:A:G	rs7865887	A	G	A	Hoxd9.mouse_homeodomain_1	-7	0	-	0	0	.